4015 190 42 32 chr10 1524 2418 -145586870 + L1MB4 LINE L1 5277 6179 -1 516 80 67 0 chr10 2434 2509 -145586779 + L1MB8 LINE L1 6099 6178 0 756 234 81 5 chr10 2950 3159 -145586129 - L1MB3 LINE L1 0 6183 5959 2683 172 25 25 chr10 3586 4075 -145585213 - L1MCa LINE L1 -5912 514 26 660 179 49 24 chr10 4214 4337 -145584951 - FLAM_A SINE Alu -7 126 1 609 98 6 58 chr10 5450 5624 -145583664 + (CCCTAA)n Simple_repeat Simple_repeat 4 168 0 1523 195 0 27 chr10 5896 6188 -145583100 + AluSx SINE Alu 6 289 -23 2299 94 0 7 chr10 6476 6773 -145582515 + AluSq SINE Alu 1 295 -18 2233 102 7 0 chr10 7137 7432 -145581856 - AluSx SINE Alu -15 297 1 283 81 0 0 chr10 9162 9199 -145580089 + Alu SINE Alu 1 37 -263 2245 109 0 7 chr10 10260 10562 -145578726 - AluSx SINE Alu -12 300 1 422 188 12 0 chr10 10633 10713 -145578575 + AluJ/FRAM SINE Alu 231 311 -1 2379 100 0 0 chr10 10736 11047 -145578241 - AluSx SINE Alu -1 311 1 849 171 38 13 chr10 11047 11205 -145578083 - AluJb SINE Alu -8 304 143 1904 131 13 36 chr10 13392 13698 -145575590 - AluSx SINE Alu -13 299 1 185 108 27 0 chr10 14218 14255 -145575033 + (TAAG)n Simple_repeat Simple_repeat 2 39 0 1743 179 0 7 chr10 14732 15029 -145574259 + AluSx SINE Alu 1 295 -17 23 0 0 0 chr10 15029 15052 -145574236 + AT_rich Low_complexity Low_complexity 1 23 0 415 287 87 41 chr10 15508 15703 -145573585 + MIR SINE MIR 11 214 -48 1953 155 147 5 chr10 15910 16285 -145573003 + MSTA LTR MaLR 1 428 0 351 132 15 44 chr10 16476 16544 -145572744 + MER116 DNA Mariner 3 68 -12 29 0 0 0 chr10 16597 16626 -145572662 + AT_rich Low_complexity Low_complexity 1 29 0 1186 129 0 43 chr10 16629 16815 -145572473 + AluSx SINE Alu 1 178 -134 1523 136 143 8 chr10 17110 17375 -145571913 - AluSx SINE Alu -11 301 1 184 313 0 15 chr10 17877 17944 -145571344 - MIR SINE MIR 0 262 197 2063 130 20 0 chr10 17974 18274 -145571014 - AluSx SINE Alu -6 306 1 201 74 0 0 chr10 18369 18396 -145570892 + (CA)n Simple_repeat Simple_repeat 2 28 0 199 341 154 11 chr10 19543 19634 -145569654 - L2 LINE L2 -19 3253 3150 505 135 27 0 chr10 19672 19746 -145569542 + FRAM SINE Alu 49 124 -52 1315 217 71 0 chr10 20375 20656 -145568632 - AluJb SINE Alu 0 302 2 33 43 0 0 chr10 20992 21039 -145568249 + AT_rich Low_complexity Low_complexity 1 47 0 2409 61 0 0 chr10 21244 21540 -145567748 - AluY SINE Alu -15 296 1 187 194 81 48 chr10 21811 21873 -145567415 - L2 LINE L2 -618 2696 2633 28 29 0 0 chr10 24537 24572 -145564716 + AT_rich Low_complexity Low_complexity 1 35 0 204 198 209 55 chr10 25010 25101 -145564187 + L2 LINE L2 1860 1964 -1350 24802 39 8 0 chr10 25210 28845 -145560443 - L1PA4 LINE L1 -11 6144 2486 930 186 6 6 chr10 28959 29120 -145560168 - AluJb SINE Alu -15 297 137 1085 318 54 23 chr10 29129 29614 -145559674 + L2 LINE L2 2069 2568 -746 1932 206 29 55 chr10 30088 30598 -145558690 - L1M4 LINE L1 -924 5222 4726 672 289 213 49 chr10 30731 31402 -145557886 - L2 LINE L2 -816 2498 1718 240 258 52 0 chr10 31482 31579 -145557709 - HAL1 LINE L1 -75 2432 2331 1025 277 41 32 chr10 31724 32063 -145557225 + MLT1I LTR MaLR 62 403 -6 246 333 92 13 chr10 32097 32332 -145556956 - L2 LINE L2 -285 2987 2732 893 210 99 67 chr10 32620 32992 -145556296 + HAL1 LINE L1 804 1187 -1320 800 255 200 43 chr10 33029 33593 -145555695 + HAL1 LINE L1 1284 1936 -571 2245 248 133 77 chr10 33636 33904 -145555384 + L1MC4a LINE L1 3696 3947 -2231 13169 160 42 23 chr10 33904 36277 -145553011 + Tigger1 DNA MER2_type 1 2418 0 2245 248 133 77 chr10 36277 37687 -145551601 + L1MC4a LINE L1 3947 5484 -694 1924 131 13 19 chr10 37687 38001 -145551287 + AluJb SINE Alu 1 312 0 2245 248 133 77 chr10 38001 38306 -145550982 + L1MC4a LINE L1 5484 5770 -408 4335 85 15 102 chr10 38500 39227 -145550061 + MER4A LTR ERV1 1 664 0 1097 153 0 0 chr10 40098 40268 -145549020 - FRAM SINE Alu -6 170 1 2267 91 0 0 chr10 40981 41279 -145548009 + AluSc SINE Alu 1 298 -11 373 246 65 36 chr10 41921 42059 -145547229 - MIR3 SINE MIR -6 202 61 194 0 39 0 chr10 42088 42114 -145547174 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 791 245 50 10 chr10 42468 42668 -145546620 - MIR SINE MIR -37 225 18 239 297 228 0 chr10 42675 42776 -145546512 - MIR SINE MIR -134 128 5 1862 141 14 0 chr10 42788 43079 -145546209 + AluJb SINE Alu 1 295 -17 1560 177 0 11 chr10 43502 43779 -145545509 - AluJo SINE Alu -38 274 1 389 164 0 0 chr10 44143 44216 -145545072 + LTR30 LTR ERV1 552 624 -98 36 40 0 0 chr10 44220 44270 -145545018 + AT_rich Low_complexity Low_complexity 1 50 0 1354 176 33 0 chr10 46002 46247 -145543041 - Tigger7 DNA MER2_type -22 2469 2217 31 44 0 0 chr10 46866 46911 -145542377 + GC_rich Low_complexity Low_complexity 1 45 0 407 133 67 0 chr10 47165 47240 -145542048 + AluJ/FRAM SINE Alu 219 298 -14 1363 239 12 60 chr10 47242 47664 -145541624 - L1M4 LINE L1 -1293 4853 4455 1984 149 0 3 chr10 47664 47973 -145541315 - AluY SINE Alu -3 308 1 1363 239 12 60 chr10 47973 48032 -145541256 - L1M4 LINE L1 -1691 4455 4395 863 212 25 5 chr10 48034 48232 -145541056 - AluJo SINE Alu -24 288 87 296 56 0 0 chr10 48253 48289 -145540999 - MER31-int LTR ERV1 -3839 1097 1062 697 132 0 0 chr10 48289 48395 -145540893 + MLT2B3 LTR ERVL 1 106 -448 226 241 60 36 chr10 48850 48933 -145540355 - L1MC4 LINE L1 -2 8040 7956 347 347 35 0 chr10 49191 49335 -145539953 - L1MC4 LINE L1 -524 7518 7370 189 339 27 18 chr10 49340 49452 -145539836 + L2 LINE L2 2687 2799 -515 1220 165 148 8 chr10 49891 50134 -145539154 + AluJb SINE Alu 1 277 -35 298 203 130 0 chr10 50145 50214 -145539074 + LTR35 LTR ERV1 453 530 -88 443 169 26 0 chr10 50275 50352 -145538936 + LTR35 LTR ERV1 540 618 0 21 0 0 0 chr10 50398 50419 -145538869 + AT_rich Low_complexity Low_complexity 1 21 0 1552 45 0 0 chr10 50529 50705 -145538583 - L1PA3 LINE L1 -2 6153 5978 1874 133 10 20 chr10 50814 51116 -145538172 + AluSx SINE Alu 13 311 -1 2045 144 0 10 chr10 51274 51587 -145537701 + AluSx SINE Alu 1 310 -2 1873 107 50 7 chr10 51595 51875 -145537413 + AluSq SINE Alu 1 292 -21 1529 169 61 0 chr10 51889 52168 -145537120 + AluJo SINE Alu 1 296 -16 1842 146 3 34 chr10 52188 52511 -145536777 + AluSq SINE Alu 1 313 0 2038 101 3 14 chr10 52517 52814 -145536474 + AluSx SINE Alu 1 294 -18 1931 125 3 13 chr10 52816 53128 -145536160 + AluSg1 SINE Alu 1 309 0 432 127 0 13 chr10 53449 53528 -145535760 - AluJ/FRAM SINE Alu -3 309 232 2247 75 3 10 chr10 53604 53911 -145535377 + AluSp SINE Alu 1 305 -8 2190 90 0 0 chr10 54624 54914 -145534374 + AluSq SINE Alu 15 304 -9 394 82 0 0 chr10 55568 55617 -145533671 + Alu SINE Alu 15 63 -239 800 192 0 0 chr10 57085 57241 -145532047 + AluSg/x SINE Alu 146 301 -11 1680 177 0 10 chr10 57430 57741 -145531547 - AluJb SINE Alu -4 308 1 198 0 0 0 chr10 57860 57882 -145531406 + (T)n Simple_repeat Simple_repeat 1 22 0 188 200 67 0 chr10 57891 57936 -145531352 + MER5B DNA MER1_type 84 131 -47 6384 154 24 75 chr10 57959 59898 -145529390 - L1MA4A LINE L1 -7 6147 4373 2720 98 0 6 chr10 59898 60264 -145529024 + THE1B LTR MaLR 1 364 0 6384 154 24 75 chr10 60264 60646 -145528642 - L1MA4A LINE L1 -1781 4373 3973 288 330 17 0 chr10 62383 62501 -145526787 - L1MEc LINE L1 -6068 328 209 402 21 0 0 chr10 62502 62549 -145526739 + (TTA)n Simple_repeat Simple_repeat 2 48 0 1978 58 0 0 chr10 62558 62798 -145526490 - AluY SINE Alu -37 274 35 5520 42 0 0 chr10 63095 63770 -145525518 - L1P LINE L1 -2255 3891 3217 19034 70 11 0 chr10 63771 66217 -145523071 + L1P LINE L1 449 2921 -3225 485 205 197 0 chr10 66870 66987 -145522301 + MER82 DNA MER2_type 4 143 -510 1861 216 28 56 chr10 67431 67895 -145521393 + MER82 DNA MER2_type 200 650 -3 662 126 0 0 chr10 68076 68163 -145521125 - 5S rRNA rRNA -31 90 4 828 145 0 0 chr10 68589 68713 -145520575 + FLAM_C SINE Alu 1 124 -19 21 0 0 0 chr10 68968 68989 -145520299 + AT_rich Low_complexity Low_complexity 1 21 0 634 273 45 0 chr10 69258 69434 -145519854 + MER20 DNA MER1_type 7 190 -29 424 290 3 30 chr10 69573 69947 -145519341 + G-rich Low_complexity Low_complexity 1 363 0 * 511 251 17 33 chr10 69883 70153 -145519135 + GA-rich Low_complexity Low_complexity 1 265 0 444 164 0 0 chr10 70223 70290 -145518998 - AluJ/FLAM SINE Alu -240 72 6 770 146 0 49 chr10 70318 70462 -145518826 - FLAM_C SINE Alu 0 143 7 266 256 31 19 chr10 70495 70655 -145518633 + L1M4 LINE L1 4348 4509 -1637 1646 232 96 15 chr10 70694 71280 -145518008 + L1M4 LINE L1 4740 5372 -774 1795 156 3 0 chr10 71284 71572 -145517716 + AluSx SINE Alu 3 291 -21 296 242 110 11 chr10 71584 71669 -145517619 + MLT1D LTR MaLR 278 371 -134 349 230 80 35 chr10 71669 71782 -145517506 + LTR35 LTR ERV1 1 118 -500 327 253 11 11 chr10 71909 72000 -145517288 + LTR58 LTR ERV1 350 440 -239 468 254 51 0 chr10 72157 72275 -145517013 + LTR35 LTR ERV1 495 618 0 * 734 176 0 14 chr10 72275 72393 -145516895 + MLT1C LTR MaLR 280 467 0 747 50 0 0 chr10 74282 74382 -145514906 + (CA)n Simple_repeat Simple_repeat 2 101 0 202 179 54 0 chr10 75914 75970 -145513318 + (CATCC)n Simple_repeat Simple_repeat 4 62 0 246 264 0 0 chr10 77070 77176 -145512112 + (CA)n Simple_repeat Simple_repeat 1 106 0 205 211 0 22 chr10 77347 77437 -145511851 + (CA)n Simple_repeat Simple_repeat 1 88 0 331 246 57 74 chr10 79605 79727 -145509561 - MIR SINE MIR -62 200 81 1980 129 0 13 chr10 79741 80050 -145509238 - AluSx SINE Alu -7 305 1 234 148 113 0 chr10 81200 81256 -145508032 - MIR SINE MIR -61 147 91 373 172 21 86 chr10 81502 81595 -145507693 + AluSg/x SINE Alu 204 290 -10 184 312 75 65 chr10 81604 81697 -145507591 + MIR3 SINE MIR 113 206 -2 360 77 0 0 chr10 82218 82270 -145507018 + (CA)n Simple_repeat Simple_repeat 2 53 0 559 206 89 48 chr10 82697 82843 -145506445 - FAM SINE Alu -20 165 14 815 176 14 0 chr10 83826 83954 -145505334 + AluJb SINE Alu 2 134 -178 2050 139 0 0 chr10 83954 84256 -145505032 + AluSx SINE Alu 1 302 -10 815 176 14 0 chr10 84256 84269 -145505019 + AluJb SINE Alu 134 145 -167 4144 195 84 5 chr10 84271 85602 -145503686 - MER52A LTR ERV1 -2 1753 177 325 326 11 80 chr10 86275 86450 -145502838 + L1MC5 LINE L1 7769 7931 -30 444 37 0 0 chr10 86744 86798 -145502490 + (CA)n Simple_repeat Simple_repeat 2 55 0 1828 139 75 33 chr10 87606 87965 -145501323 - THE1C LTR MaLR -1 374 1 2199 92 3 22 chr10 87966 88283 -145501005 - THE1C-int LTR MaLR -1 1579 1269 283 100 0 83 chr10 88289 88349 -145500939 - L1PA10 LINE L1 -4 6164 6110 819 131 0 0 chr10 88359 88489 -145500799 - L1M2 LINE L1 -818 5473 5344 739 153 6 102 chr10 88488 88665 -145500623 + L1 LINE L1 3802 3961 -2185 * 456 196 140 0 chr10 88784 88891 -145500397 + L1 LINE L1 3975 4096 -2050 655 149 53 0 chr10 88891 89005 -145500283 - MSTB1 LTR MaLR 0 432 313 7497 126 8 68 chr10 89005 90430 -145498858 - THE1C-int LTR MaLR -299 1352 1 1684 145 99 34 chr10 90430 90782 -145498506 - THE1C LTR MaLR 0 375 1 1084 149 99 27 chr10 91053 91275 -145498013 + MER4B LTR ERV1 1 238 -372 10215 92 3 8 chr10 91277 91447 -145497841 - HERVL-A2 LTR ERVL -4306 1348 1179 2142 112 0 0 chr10 91447 91751 -145497537 - AluY SINE Alu -7 304 1 10215 92 3 8 chr10 91751 92935 -145496353 - HERVL-A2 LTR ERVL -4475 1179 1 2911 110 50 11 chr10 92935 93371 -145495917 - MLT2A2 LTR ERVL 0 453 1 2214 106 0 0 chr10 93538 93841 -145495447 - AluSx SINE Alu -9 303 1 23 78 0 0 chr10 93894 93945 -145495343 + AT_rich Low_complexity Low_complexity 1 51 0 1389 180 71 4 chr10 93949 94216 -145495072 + AluJb SINE Alu 4 288 -24 1310 194 110 68 chr10 94368 94723 -145494565 + MLT1A2 LTR MaLR 1 370 -4 237 316 61 10 chr10 95123 95221 -145494067 + MIR SINE MIR 82 184 -78 1837 143 85 109 chr10 95590 95840 -145493448 + MER4B LTR ERV1 3 239 -371 2247 82 0 7 chr10 95840 96144 -145493144 + AluY SINE Alu 10 311 0 1837 143 85 109 chr10 96144 96353 -145492935 + MER4B LTR ERV1 239 451 -159 7006 237 84 26 chr10 96789 98368 -145490920 - MER52A LTR ERV1 0 1755 85 3974 170 30 30 chr10 98707 99424 -145489864 - MER4E LTR ERV1 -3 776 57 3933 153 9 8 chr10 99424 100058 -145489230 - MER41B LTR ERV1 0 635 1 3974 170 30 30 chr10 100058 100116 -145489172 - MER4E LTR ERV1 -721 58 1 223 196 22 0 chr10 100436 100482 -145488806 + GA-rich Low_complexity Low_complexity 2 48 0 46 19 0 0 chr10 101256 101309 -145487979 + AT_rich Low_complexity Low_complexity 1 53 0 2197 112 0 0 chr10 101417 101720 -145487568 - AluSx SINE Alu -9 303 1 1941 111 7 7 chr10 101791 102071 -145487217 - AluSq SINE Alu -33 280 1 662 219 128 27 chr10 102263 102450 -145486838 - MER3 DNA MER1_type -3 206 1 2066 134 0 0 chr10 103215 103532 -145485756 - AluSx SINE Alu 0 317 1 2019 137 137 8 chr10 103603 103982 -145485306 - MSTA LTR MaLR 0 428 1 207 250 19 0 chr10 104373 104425 -145484863 + (TA)n Simple_repeat Simple_repeat 2 54 0 4907 192 76 14 chr10 104652 105913 -145483375 + L1MC1 LINE L1 570 1751 -4675 318 50 0 0 chr10 105913 105953 -145483335 + (TG)n Simple_repeat Simple_repeat 1 40 0 4907 192 76 14 chr10 105953 107120 -145482168 + L1MC1 LINE L1 1751 3246 -3180 4661 235 24 47 chr10 107116 107366 -145481922 + L1MC1 LINE L1 4164 4418 -2008 * 1840 184 16 27 chr10 107366 107735 -145481553 - MLT1A1 LTR MaLR 0 365 1 4661 235 24 47 chr10 107735 108967 -145480321 + L1MC1 LINE L1 4418 5612 -814 1221 183 48 28 chr10 108967 109219 -145480069 + AluJo SINE Alu 45 301 -11 4305 166 23 7 chr10 109222 109995 -145479293 + L1MC1 LINE L1 5595 6380 -233 1612 134 7 29 chr10 110499 110775 -145478513 + L1MC1 LINE L1 6056 6325 -8 2063 100 0 4 chr10 110804 111085 -145478203 + AluSq SINE Alu 30 309 -4 24 0 0 0 chr10 111236 111260 -145478028 + AT_rich Low_complexity Low_complexity 1 24 0 182 298 43 32 chr10 112294 112388 -145476900 - L2 LINE L2 -291 2981 2887 427 298 16 8 chr10 112546 112670 -145476618 + L2 LINE L2 3189 3313 0 1072 245 14 34 chr10 113236 113587 -145475701 - L1MEc LINE L1 -4286 2110 1767 23 54 0 0 chr10 114071 114108 -145475180 + AT_rich Low_complexity Low_complexity 1 37 0 2180 99 0 7 chr10 115896 116190 -145473098 - AluSg SINE Alu -18 292 1 1770 154 7 3 chr10 116831 117116 -145472172 + AluSx SINE Alu 5 290 -22 1523 231 111 55 chr10 118676 119655 -145469633 - L1MC5 LINE L1 -449 7512 6476 2219 110 7 3 chr10 121026 121334 -145467954 + AluSq SINE Alu 5 313 0 586 200 0 8 chr10 121496 121626 -145467662 - AluSg/x SINE Alu -7 302 174 398 316 172 5 chr10 122413 122628 -145466660 - MIR SINE MIR 0 262 12 327 260 102 16 chr10 122716 122843 -145466445 - MIR SINE MIR -65 197 60 500 288 112 0 chr10 123292 123462 -145465826 - MIR SINE MIR -66 196 8 311 313 51 28 chr10 124113 124547 -145464741 - L1M4 LINE L1 -748 5398 4955 233 261 52 96 chr10 124715 124830 -145464458 + L2 LINE L2 3197 3306 -7 193 288 51 0 chr10 124913 124972 -145464316 + MIR SINE MIR 64 125 -83 1762 202 93 134 chr10 124985 125305 -145463983 - L1ME1 LINE L1 -88 6078 5747 1654 149 4 39 chr10 125305 125586 -145463702 - AluJb SINE Alu -21 291 21 559 138 0 0 chr10 125586 125673 -145463615 - AluJ/FLAM SINE Alu -225 87 1 1762 202 93 134 chr10 125673 126125 -145463163 - L1ME1 LINE L1 -417 5749 5254 437 351 69 48 chr10 126149 126568 -145462720 + HAL1 LINE L1 1236 1663 -844 640 241 73 5 chr10 126750 126941 -145462347 + L1ME3A LINE L1 5746 5949 -221 535 143 9 9 chr10 130544 130656 -145458632 + CT-rich Low_complexity Low_complexity 2 113 0 246 253 118 51 chr10 130700 130766 -145458522 - L1ME LINE L1 -213 5908 5848 1431 193 39 18 chr10 130766 131051 -145458237 - AluJb SINE Alu -21 291 1 246 253 118 51 chr10 131051 131162 -145458126 - L1ME LINE L1 -273 5848 5719 1239 127 0 0 chr10 131185 131350 -145457938 - AluJ SINE Alu -14 298 134 235 237 0 0 chr10 131484 131522 -145457766 - FLAM_C SINE Alu 0 170 133 180 0 0 0 chr10 131524 131544 -145457744 + (TG)n Simple_repeat Simple_repeat 2 21 0 535 104 72 13 chr10 131547 131771 -145457517 + (TA)n Simple_repeat Simple_repeat 1 237 0 803 154 24 0 chr10 131771 131894 -145457394 - FLAM_C SINE Alu -6 127 2 314 298 130 19 chr10 131946 132154 -145457134 - L1ME LINE L1 -479 5642 5412 189 0 0 0 chr10 132904 132925 -145456363 + (CA)n Simple_repeat Simple_repeat 2 22 0 21 36 0 0 chr10 134374 134402 -145454886 + AT_rich Low_complexity Low_complexity 1 28 0 283 358 0 0 chr10 134432 134541 -145454747 + L1M4 LINE L1 4031 4139 -2007 366 293 37 16 chr10 134615 134803 -145454485 + L1M4 LINE L1 4334 4525 -1621 252 291 0 0 chr10 134841 134927 -145454361 + L1M4 LINE L1 4616 4701 -1445 296 331 37 25 chr10 135258 135421 -145453867 - L1MC/D LINE L1 -1983 5825 5661 348 246 129 75 chr10 135604 135884 -145453404 - L1 LINE L1 -1646 4500 4206 432 331 106 51 chr10 135973 136541 -145452747 - L1 LINE L1 -2139 4007 3409 1784 184 3 0 chr10 136727 137031 -145452257 + AluJb SINE Alu 1 305 -7 2278 91 0 0 chr10 137397 137684 -145451604 + AluSx SINE Alu 1 287 -25 21 0 0 0 chr10 138140 138161 -145451127 + AT_rich Low_complexity Low_complexity 1 21 0 6255 37 5 0 chr10 138161 138914 -145450374 - L1PA3 LINE L1 0 6155 5399 * 7906 31 5 0 chr10 138905 139866 -145449422 + L1PA3 LINE L1 4430 5395 -751 490 197 88 15 chr10 140139 140276 -145449012 - HAL1b LINE L1 -853 495 349 273 163 0 0 chr10 140322 140371 -145448917 + (TATATG)n Simple_repeat Simple_repeat 5 53 0 1767 123 12 108 chr10 142200 142533 -145446755 + AluJo SINE Alu 1 301 -11 445 311 41 18 chr10 143804 144012 -145445276 + MIR SINE MIR 3 209 -53 514 265 15 103 chr10 144439 144643 -145444645 + MER91B DNA MER1_type 4 189 -1 713 189 8 0 chr10 145645 145767 -145443521 + FLAM_A SINE Alu 1 123 -10 2025 149 0 0 chr10 146871 147173 -145442115 - AluJo SINE Alu -5 307 6 32 26 0 0 chr10 148180 148219 -145441069 + AT_rich Low_complexity Low_complexity 1 39 0 1727 146 79 7 chr10 148574 148854 -145440434 + AluSx SINE Alu 1 300 -12 757 296 71 0 chr10 148984 149224 -145440064 - MIR SINE MIR 0 262 6 2147 108 0 29 chr10 154355 154661 -145434627 - AluSx SINE Alu -15 297 1 180 125 0 0 chr10 154746 154778 -145434510 + (TTTTC)n Simple_repeat Simple_repeat 2 33 0 1556 191 16 3 chr10 156666 156969 -145432319 - AluJo SINE Alu -5 307 1 355 241 259 0 chr10 157215 157381 -145431907 + MER3 DNA MER1_type 1 209 0 322 157 0 0 chr10 157342 157393 -145431895 - MER3 DNA MER1_type -123 86 36 * 311 297 78 99 chr10 161439 161516 -145427772 + MER5A DNA MER1_type 2 79 -110 2359 99 0 0 chr10 161516 161819 -145427469 + AluSg SINE Alu 3 305 -5 311 297 78 99 chr10 161819 161933 -145427355 + MER5A DNA MER1_type 79 189 0 224 330 187 0 chr10 162165 162256 -145427032 - L2 LINE L2 -8 3305 3198 1341 198 53 14 chr10 162276 162559 -145426729 + MER58B DNA MER1_type 48 341 0 389 259 9 36 chr10 164409 164521 -145424767 + MER5B DNA MER1_type 15 123 -55 397 259 103 73 chr10 164533 164765 -145424523 - L1ME2 LINE L1 -10 6154 5916 288 0 0 0 chr10 166300 166332 -145422956 + (TG)n Simple_repeat Simple_repeat 1 32 0 229 70 23 93 chr10 166348 166391 -145422897 + L1MA8 LINE L1 6120 6159 -132 376 172 103 11 chr10 166393 166480 -145422808 + L1MA8 LINE L1 6191 6285 -6 * 437 266 87 17 chr10 166449 166690 -145422598 - L1MC4a LINE L1 -1341 6467 6210 1028 95 0 0 chr10 168682 168819 -145420469 + FLAM_C SINE Alu 1 137 -6 26 0 0 0 chr10 169592 169618 -145419670 + AT_rich Low_complexity Low_complexity 1 26 0 1846 152 10 3 chr10 169895 170191 -145419097 + AluJo SINE Alu 13 310 -2 2548 44 0 0 chr10 170290 170587 -145418701 + AluY SINE Alu 1 297 -14 30 0 0 0 chr10 171088 171118 -145418170 + AT_rich Low_complexity Low_complexity 1 30 0 1943 147 3 20 chr10 171242 171548 -145417740 + AluJb SINE Alu 1 301 -11 338 283 0 0 chr10 173802 173894 -145415394 + L1MC4 LINE L1 6610 6701 -1341 * 342 299 0 0 chr10 173827 173914 -145415374 - L1MC4 LINE L1 -1340 6702 6616 304 234 10 15 chr10 173923 174028 -145415260 + L1MC4 LINE L1 1995 6983 -1339 863 159 12 40 chr10 174032 174245 -145415043 - L1P4 LINE L1 -355 5801 5604 26 64 0 0 chr10 174281 174328 -145414960 + AT_rich Low_complexity Low_complexity 1 47 0 8205 84 5 7 chr10 175081 176199 -145413089 + L1P LINE L1 1655 2769 -3377 2448 62 0 13 chr10 176357 176661 -145412627 - AluY SINE Alu -11 300 1 23 54 0 0 chr10 176967 177004 -145412284 + AT_rich Low_complexity Low_complexity 1 37 0 180 0 0 0 chr10 178230 178250 -145411038 + (T)n Simple_repeat Simple_repeat 1 20 0 201 74 0 0 chr10 179941 179968 -145409320 + (TCC)n Simple_repeat Simple_repeat 1 27 0 807 11 0 0 chr10 184647 184737 -145404551 - 5S rRNA rRNA -31 90 1 229 299 143 0 chr10 186821 186898 -145402390 + L2 LINE L2 3160 3247 -25 1965 211 70 2 chr10 187008 187496 -145401792 + L1MA9 LINE L1 5792 6312 0 717 191 140 0 chr10 189637 189773 -145399515 - AluJb SINE Alu -11 301 147 186 43 0 0 chr10 190281 190304 -145398984 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 1128 237 110 52 chr10 190314 190761 -145398527 + MLT1J LTR MaLR 1 473 -38 1565 207 7 10 chr10 191807 192102 -145397186 - AluJb SINE Alu -18 294 1 2634 40 0 0 chr10 194899 195200 -145394088 - AluY SINE Alu -10 301 1 22 0 0 0 chr10 195482 195504 -145393784 + AT_rich Low_complexity Low_complexity 1 22 0 2371 92 0 0 chr10 196769 197064 -145392224 + AluSc SINE Alu 2 296 -13 2168 119 0 7 chr10 197729 198023 -145391265 - AluJb SINE Alu -19 293 2 234 167 37 19 chr10 198244 198298 -145390990 - MER5A DNA MER1_type -122 67 13 364 228 20 30 chr10 199739 199840 -145389448 + MIR SINE MIR 162 261 -1 2264 90 0 0 chr10 200131 200419 -145388869 + AluY SINE Alu 1 288 -23 24 77 0 0 chr10 200721 200773 -145388515 + AT_rich Low_complexity Low_complexity 1 52 0 248 323 156 49 chr10 202127 202390 -145386898 + L2 LINE L2 2894 3184 -88 423 152 0 0 chr10 203060 203126 -145386162 - MADE1 DNA Mariner -14 66 1 229 195 69 81 chr10 204639 204726 -145384562 - L1MB3 LINE L1 -1 6182 6097 528 240 14 4 chr10 206559 206768 -145382520 - MER65C LTR ERV1 -159 302 1 826 201 0 13 chr10 206827 206981 -145382307 + FRAM SINE Alu 1 152 -14 1391 201 47 0 chr10 209273 209552 -145379736 + AluJb SINE Alu 21 312 0 23 0 0 0 chr10 209643 209666 -145379622 + AT_rich Low_complexity Low_complexity 1 23 0 1226 133 55 62 chr10 209688 210030 -145379258 + L1MA5A LINE L1 5083 5427 -743 580 165 0 10 chr10 210043 210146 -145379142 - MER41B LTR ERV1 -88 547 446 1225 112 0 51 chr10 210146 210208 -145379080 + L1MA5A LINE L1 5413 5477 -820 2425 71 0 0 chr10 210208 210518 -145378770 + AluY SINE Alu 1 310 -1 1225 112 0 51 chr10 210518 210652 -145378636 + L1MA5A LINE L1 5477 5599 -698 796 115 0 18 chr10 210658 210771 -145378517 + AluSg SINE Alu 37 147 -163 3399 46 2 0 chr10 210771 211202 -145378086 - L1PA5 LINE L1 -748 5398 4967 6157 51 0 0 chr10 211202 211946 -145377342 + L1PA5 LINE L1 5410 6154 0 968 99 56 0 chr10 211946 212113 -145377175 + AluSg SINE Alu 134 308 0 294 29 0 0 chr10 212132 212167 -145377121 + (CA)n Simple_repeat Simple_repeat 1 35 0 3365 169 75 5 chr10 212168 212823 -145376465 + L1MA5A LINE L1 5596 6296 -1 1552 250 136 8 chr10 212824 213420 -145375868 - L1MC3 LINE L1 -3 7782 7111 895 238 117 67 chr10 213895 214357 -145374931 - L1MC4 LINE L1 -6 8036 7552 22 0 0 0 chr10 214368 214390 -145374898 + AT_rich Low_complexity Low_complexity 1 22 0 3486 186 49 47 chr10 214390 215415 -145373873 + L1MB3 LINE L1 4985 6028 -155 180 320 0 13 chr10 215896 215974 -145373314 - L2 LINE L2 -1279 2035 1959 378 328 143 0 chr10 217069 217258 -145372030 - MIR SINE MIR -16 246 31 1510 237 105 5 chr10 217418 217819 -145371469 - Tigger3b DNA MER2_type 0 1231 791 245 222 19 0 chr10 217915 217969 -145371319 - Tigger3b DNA MER2_type -386 845 791 * 270 178 0 0 chr10 217966 218011 -145371277 - Tigger3b DNA MER2_type -386 845 801 2822 193 97 50 chr10 218172 218396 -145370892 - Tigger3b DNA MER2_type -2184 844 632 2380 78 3 0 chr10 218396 218705 -145370583 - AluSp SINE Alu -3 310 1 2822 193 97 50 chr10 218705 219285 -145370003 - Tigger3b DNA MER2_type -2396 632 2 204 320 51 0 chr10 219408 219486 -145369802 + (CATG)n Simple_repeat Simple_repeat 1 82 0 376 255 27 20 chr10 219537 219686 -145369602 + (CA)n Simple_repeat Simple_repeat 1 150 0 319 320 11 22 chr10 220047 220225 -145369063 + (CA)n Simple_repeat Simple_repeat 1 176 0 1488 203 0 7 chr10 220530 220811 -145368477 - AluJo SINE Alu -20 292 14 29 0 0 0 chr10 220848 220877 -145368411 + AT_rich Low_complexity Low_complexity 1 29 0 1710 193 97 0 chr10 221751 222124 -145367164 + MSTB1 LTR MaLR 24 432 0 297 248 116 16 chr10 223758 223879 -145365409 - MER20 DNA MER1_type -60 159 27 1886 136 27 0 chr10 224431 224725 -145364563 - AluSx SINE Alu -10 302 1 1538 195 82 0 chr10 228282 228600 -145360688 - MER2 DNA MER2_type 0 344 1 831 208 72 22 chr10 229537 229804 -145359484 - MLT1A1 LTR MaLR -7 367 1 492 303 123 44 chr10 230010 230350 -145358938 - L1MCc LINE L1 -4410 2712 2346 644 287 82 51 chr10 230481 231114 -145358174 - L1MCc LINE L1 -4887 1536 1252 331 317 127 17 chr10 231583 231883 -145357405 - L1MCc LINE L1 -6074 349 17 22 0 0 0 chr10 231885 231907 -145357381 + AT_rich Low_complexity Low_complexity 1 22 0 320 284 23 0 chr10 232117 232205 -145357083 + MER58 DNA MER1_type 177 266 -2154 1941 133 0 29 chr10 233717 234026 -145355262 - AluSx SINE Alu -12 300 1 1851 110 0 4 chr10 235076 235339 -145353949 + AluSg SINE Alu 36 297 -13 843 152 0 14 chr10 235450 235595 -145353693 + FLAM_C SINE Alu 1 143 0 305 212 169 8 chr10 237441 237559 -145351729 + L1ME4a LINE L1 5985 6121 0 2040 121 0 0 chr10 238798 239103 -145350185 + AluY SINE Alu 1 305 -6 1820 131 12 44 chr10 239714 240034 -145349254 + AluJb SINE Alu 1 310 -2 679 195 0 17 chr10 241396 241514 -145347774 - FLAM_A SINE Alu -17 116 1 489 151 244 34 chr10 243859 243978 -145345310 + MER58A DNA MER1_type 46 189 -35 600 209 118 13 chr10 244536 244689 -145344599 - MER20 DNA MER1_type -9 210 42 568 252 167 9 chr10 244689 244899 -145344389 - L2 LINE L2 -1366 1948 1706 24 0 0 0 chr10 245507 245531 -145343757 + AT_rich Low_complexity Low_complexity 1 24 0 2066 93 3 23 chr10 248103 248404 -145340884 + AluSx SINE Alu 1 295 -17 190 380 120 9 chr10 248836 248944 -145340344 - MIR SINE MIR -141 121 2 380 159 439 8 chr10 249167 249299 -145339989 - MER5A DNA MER1_type 0 189 1 367 235 161 37 chr10 249525 249687 -145339601 - MER5A DNA MER1_type 0 189 8 854 197 175 11 chr10 249758 250027 -145339261 - MER33 DNA MER1_type 0 324 12 269 282 27 45 chr10 250609 250719 -145338569 - L2 LINE L2 -24 3289 3182 203 273 0 0 chr10 251440 251484 -145337804 + (TATG)n Simple_repeat Simple_repeat 4 47 0 742 186 0 0 chr10 251544 251668 -145337620 + FLAM_C SINE Alu 5 128 -5 3003 163 61 40 chr10 252292 252919 -145336369 - LTR49-int LTR ERV1 -3127 3204 2565 2252 82 0 25 chr10 252924 253243 -145336045 + AluY SINE Alu 1 311 0 1984 127 14 0 chr10 253271 253563 -145335725 - AluSg1 SINE Alu -13 296 1 1876 239 57 11 chr10 253563 254095 -145335193 - LTR49-int LTR ERV1 -3858 2473 1839 646 150 74 104 chr10 254144 254298 -145334990 - LTR49-int LTR ERV1 -2645 2235 2078 1923 113 46 0 chr10 254298 254580 -145334708 + AluSc SINE Alu 3 297 -12 646 150 74 104 chr10 254580 254671 -145334617 - LTR49-int LTR ERV1 -2802 2078 1501 262 146 0 36 chr10 254670 254725 -145334563 - LTR49-int LTR ERV1 -4996 1335 1283 * 274 268 42 0 chr10 254725 254796 -145334492 - tRNA-Glu-GAG tRNA tRNA 0 75 2 283 244 13 13 chr10 254818 254896 -145334392 - LTR49-int LTR ERV1 -5138 1193 1116 338 156 0 31 chr10 255022 255086 -145334202 - LTR49-int LTR ERV1 -3690 1181 1120 3244 134 10 4 chr10 255839 256333 -145332955 - LOR1a LTR ERV1 0 497 1 1330 157 19 83 chr10 256504 256637 -145332651 - LTR56 LTR ERV1 -1 444 304 2307 128 0 0 chr10 256637 256949 -145332339 - AluSx SINE Alu 0 312 1 1330 157 19 83 chr10 256949 257127 -145332161 - LTR56 LTR ERV1 -141 304 153 888 198 20 20 chr10 258068 258270 -145331018 - LTR56 LTR ERV1 -234 211 10 7473 37 6 7 chr10 258271 259491 -145329797 + L1PA5 LINE L1 4932 6151 -3 439 191 64 0 chr10 259502 259612 -145329676 - LTR37A LTR ERV1 -264 162 46 449 262 162 80 chr10 259698 260339 -145328949 + L1MC4a LINE L1 5326 6019 -1789 945 260 60 0 chr10 261718 261999 -145327289 + MER58B DNA MER1_type 34 331 -10 275 327 27 9 chr10 262661 262771 -145326517 - MER5A DNA MER1_type -74 115 4 2108 128 3 0 chr10 264832 265129 -145324159 + AluSc SINE Alu 1 298 -11 285 208 69 0 chr10 366477 366549 -145222739 - L1MCa LINE L1 -4493 1933 1857 * 562 186 57 0 chr10 366536 366660 -145222628 - L1MCa LINE L1 -5299 1127 997 520 252 32 13 chr10 366666 366821 -145222467 - L1MCa LINE L1 -6250 176 19 471 319 96 21 chr10 366833 367021 -145222267 - L1M4 LINE L1 -2999 3147 2946 1668 176 20 3 chr10 367168 367463 -145221825 - AluJo SINE Alu -12 300 1 351 273 94 0 chr10 368633 368761 -145220527 - Charlie1 DNA MER1_type 0 2761 2622 231 297 102 8 chr10 368828 368956 -145220332 - Charlie1 DNA MER1_type -2602 159 20 24934 92 22 3 chr10 370205 374106 -145215182 + L1PA7 LINE L1 1527 5499 -673 1879 88 60 0 chr10 374208 374476 -145214812 + L1M1 LINE L1 5498 5793 -401 16957 31 10 0 chr10 374476 377249 -145212039 + L1PA2 LINE L1 3372 6153 -2 1879 88 60 0 chr10 377249 377281 -145212007 + L1M1 LINE L1 5793 5822 -372 2879 87 0 3 chr10 377285 377665 -145211623 + L1PA7 LINE L1 5769 6147 -7 2116 108 3 48 chr10 378185 378499 -145210789 + AluSp SINE Alu 1 300 -13 2252 123 0 0 chr10 379022 379323 -145209965 - AluSx SINE Alu -11 301 1 222 403 86 0 chr10 379381 379567 -145209721 + L2 LINE L2 2656 2857 -457 306 318 34 0 chr10 379607 379695 -145209593 - L2 LINE L2 -41 3272 3182 319 296 30 24 chr10 379740 379909 -145209379 + (TAGA)n Simple_repeat Simple_repeat 3 172 0 273 250 15 15 chr10 380489 380557 -145208731 + MIR SINE MIR 81 148 -114 1203 115 6 22 chr10 381457 381640 -145207648 - AluSq SINE Alu -10 303 124 24 96 0 0 chr10 382644 382717 -145206571 + AT_rich Low_complexity Low_complexity 1 73 0 590 290 180 56 chr10 383989 384600 -145204688 - HAL1 LINE L1 -404 2103 1417 2062 144 3 7 chr10 387493 387798 -145201490 - AluSg SINE Alu -6 304 1 1797 150 28 0 chr10 391987 392273 -145197015 - AluJo SINE Alu -18 294 1 2556 68 10 0 chr10 395732 396040 -145193248 - AluY SINE Alu 0 311 1 206 279 15 29 chr10 396568 396636 -145192652 - MIR SINE MIR -118 144 78 241 67 133 0 chr10 400730 400775 -145188513 + Alu SINE Alu 238 288 -14 2694 209 39 46 chr10 402904 403620 -145185668 + L1MA9 LINE L1 5495 6205 -107 630 227 85 0 chr10 403765 403941 -145185347 + MER2 DNA MER2_type 1 191 -154 229 279 58 0 chr10 404164 404250 -145185038 + MER2 DNA MER2_type 101 191 -154 243 260 52 0 chr10 404562 404639 -145184649 + MER2 DNA MER2_type 101 181 -164 273 264 46 0 chr10 404803 404890 -145184398 + MER2 DNA MER2_type 101 191 -154 245 250 66 0 chr10 404883 404959 -145184329 + MER2 DNA MER2_type 101 181 -164 * 756 245 46 33 chr10 404962 405007 -145184281 + MER2 DNA MER2_type 101 144 -201 2181 103 0 3 chr10 405007 405289 -145183999 + AluY SINE Alu 1 281 -30 180 0 0 0 chr10 405291 405311 -145183977 + (CAAT)n Simple_repeat Simple_repeat 2 21 0 756 245 46 33 chr10 405311 405503 -145183785 + MER2 DNA MER2_type 144 344 -1 1689 176 25 0 chr10 406046 406330 -145182958 - AluJb SINE Alu -21 291 1 921 167 12 153 chr10 407511 407960 -145181328 - THE1B LTR MaLR 0 364 1 191 217 87 0 chr10 408690 408736 -145180552 - L2 LINE L2 -2 3311 3262 314 314 34 17 chr10 409907 410025 -145179263 - L2 LINE L2 0 3313 3194 1770 180 18 7 chr10 410027 410311 -145178977 + AluJb SINE Alu 1 287 -25 464 299 61 30 chr10 410513 410677 -145178611 + L1M4 LINE L1 2921 3089 -3057 472 319 91 7 chr10 410692 411095 -145178193 + L1M4 LINE L1 4160 4607 -1539 226 235 99 0 chr10 411485 411566 -145177722 + L1M LINE L1 5301 5389 -970 231 36 0 0 chr10 413135 413163 -145176125 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 317 222 103 34 chr10 417467 417584 -145171704 - MIR SINE MIR -115 147 23 263 324 131 14 chr10 418297 418442 -145170846 - MIR SINE MIR -1 261 100 1632 158 9 85 chr10 420442 420771 -145168517 + AluJb SINE Alu 1 304 -8 2171 122 6 16 chr10 420798 421109 -145168179 + AluSq SINE Alu 1 308 -5 1967 159 3 7 chr10 423605 423914 -145165374 + AluSx SINE Alu 1 308 -4 348 117 39 0 chr10 424505 424582 -145164706 + G-rich Low_complexity Low_complexity 1 80 0 1070 206 81 12 chr10 426615 426935 -145162353 + MLT1A1 LTR MaLR 23 364 -1 184 266 47 0 chr10 429671 429735 -145159553 + MIR SINE MIR 45 111 -97 3886 242 67 1 chr10 429952 431007 -145158281 - L1MC1 LINE L1 -1 6332 5208 244 304 20 0 chr10 432607 432709 -145156579 + (TA)n Simple_repeat Simple_repeat 1 104 0 223 200 246 0 chr10 434021 434131 -145155157 - MER5A DNA MER1_type -18 171 35 230 289 60 0 chr10 436249 436332 -145152956 + MLT1J LTR MaLR 346 433 -78 743 173 7 14 chr10 437971 438110 -145151178 - AluJb SINE Alu -19 293 156 960 134 0 0 chr10 438725 438859 -145150429 + FLAM_C SINE Alu 6 139 -4 244 114 23 23 chr10 438924 438968 -145150320 + MER101B LTR ERV1 13 56 -514 642 273 84 8 chr10 439170 439408 -145149880 + LTR51 LTR ERV1 228 483 -188 369 316 0 0 chr10 440743 440980 -145148308 + GA-rich Low_complexity Low_complexity 1 237 0 699 166 0 64 chr10 440987 441204 -145148084 - AluJb SINE Alu -36 276 1 767 157 40 26 chr10 441724 441952 -145147336 + MER4A LTR ERV1 1 303 -361 363 140 10 194 chr10 441958 442089 -145147199 + MER4B LTR ERV1 517 610 0 2914 13 0 0 chr10 442850 443160 -145146128 - AluYb8 SINE Alu -8 310 1 816 262 112 29 chr10 444190 444575 -145144713 - MLT1C LTR MaLR -4 463 47 257 241 108 0 chr10 444707 444790 -145144498 - MLT1C LTR MaLR -366 101 10 1978 132 10 3 chr10 445978 446274 -145143014 - AluSx SINE Alu -14 298 1 1505 189 22 11 chr10 446352 446627 -145142661 - AluJo SINE Alu -22 290 13 1216 241 89 0 chr10 447446 447749 -145141539 - MER2 DNA MER2_type -14 331 2 567 212 196 6 chr10 448729 448908 -145140380 + L1MB3 LINE L1 5970 6182 -1 975 260 19 11 chr10 451924 452193 -145137095 - L1MB7 LINE L1 -19 6165 5895 2257 207 105 25 chr10 452396 453193 -145136095 - L1MB7 LINE L1 -274 5904 5020 987 210 75 68 chr10 453193 453336 -145135952 + MLT1B LTR MaLR 1 141 -249 2056 125 57 0 chr10 453336 453632 -145135656 - AluSq SINE Alu 0 313 1 987 210 75 68 chr10 453632 453873 -145135415 + MLT1B LTR MaLR 141 388 -2 2257 207 105 25 chr10 453873 453994 -145135294 - L1MB7 LINE L1 -1158 5020 4910 331 167 121 0 chr10 454098 454164 -145135124 - Charlie1 DNA MER1_type 0 2761 2688 2091 127 13 16 chr10 454171 454479 -145134809 + AluSx SINE Alu 1 307 -5 1347 292 155 4 chr10 454479 455215 -145134073 - Charlie1 DNA MER1_type -150 2611 1765 267 168 20 10 chr10 456621 456722 -145132566 + (CAGG)n Simple_repeat Simple_repeat 2 103 0 243 0 0 0 chr10 457088 457115 -145132173 + (A)n Simple_repeat Simple_repeat 1 27 0 416 280 40 40 chr10 457380 457555 -145131733 - MER106A DNA MER1_type -16 220 46 434 245 83 31 chr10 458147 458183 -145131105 - MER3 DNA MER1_type -1 208 175 2198 129 7 0 chr10 458183 458486 -145130802 - AluSx SINE Alu -7 305 1 434 245 83 31 chr10 458486 458641 -145130647 - MER3 DNA MER1_type -34 175 7 2349 83 3 0 chr10 460745 461033 -145128255 + AluY SINE Alu 1 289 -22 184 321 19 0 chr10 463848 463901 -145125387 + MER5A DNA MER1_type 67 120 -69 247 252 28 19 chr10 467054 467161 -145122127 + CT-rich Low_complexity Low_complexity 2 109 0 2234 164 108 24 chr10 467805 468364 -145120924 + MER4B LTR ERV1 1 903 0 2372 238 81 49 chr10 470561 471393 -145117895 + Cheshire DNA MER1_type 509 1366 -1054 459 248 153 0 chr10 471481 471618 -145117670 - L1MEc LINE L1 -6201 195 38 443 328 66 6 chr10 471662 471845 -145117443 + MIR SINE MIR 48 241 -21 251 284 31 102 chr10 474151 474278 -145115010 + MER5A DNA MER1_type 9 126 -52 1948 130 0 11 chr10 474284 474554 -145114734 - AluSg SINE Alu -7 303 37 1735 156 43 0 chr10 474748 475030 -145114258 - AluSx SINE Alu -18 294 1 2718 36 3 0 chr10 475586 475892 -145113396 + AluY SINE Alu 1 307 -4 266 234 52 0 chr10 476249 476326 -145112962 + MER58C DNA MER1_type 117 197 -18 232 323 83 0 chr10 477326 477422 -145111866 - MIR SINE MIR -58 204 101 378 242 24 24 chr10 478534 478658 -145110630 + CT-rich Low_complexity Low_complexity 4 127 0 1723 170 0 3 chr10 480515 480798 -145108490 - AluJb SINE Alu -25 287 6 1807 154 7 36 chr10 483720 484026 -145105262 + AluSx SINE Alu 1 297 -15 203 114 23 0 chr10 484885 484929 -145104359 + T-rich Low_complexity Low_complexity 3 47 0 266 254 10 83 chr10 485799 485992 -145103296 + (CATA)n Simple_repeat Simple_repeat 1 179 0 288 287 25 32 chr10 486284 486441 -145102847 + (CATA)n Simple_repeat Simple_repeat 3 158 0 266 297 22 33 chr10 486507 486689 -145102599 + (CATA)n Simple_repeat Simple_repeat 1 180 0 329 253 28 55 chr10 486799 486981 -145102307 + (CATA)n Simple_repeat Simple_repeat 3 179 0 * 355 251 40 29 chr10 486860 487035 -145102253 + (CATATA)n Simple_repeat Simple_repeat 4 180 0 346 264 22 50 chr10 487157 487339 -145101949 + (CATATA)n Simple_repeat Simple_repeat 3 179 0 246 325 24 30 chr10 487280 487446 -145101842 + (TATG)n Simple_repeat Simple_repeat 1 165 0 * 300 314 23 29 chr10 487458 487633 -145101655 + (CATATA)n Simple_repeat Simple_repeat 4 177 0 208 307 12 49 chr10 487602 487765 -145101523 + (CATA)n Simple_repeat Simple_repeat 1 157 0 * 1392 156 59 103 chr10 488965 489305 -145099983 - MER1B DNA MER1_type 0 339 15 1209 183 0 9 chr10 489479 489698 -145099590 + AluJo SINE Alu 89 305 -7 230 143 0 36 chr10 492751 492807 -145096481 - L1MA4 LINE L1 -295 6005 5952 235 321 36 0 chr10 494385 494469 -145094819 + MIR SINE MIR 86 172 -90 210 325 37 0 chr10 495199 495362 -145093926 + (CCCCAG)n Simple_repeat Simple_repeat 3 171 0 1079 296 83 33 chr10 495905 496698 -145092590 - L1ME LINE L1 -465 5699 4863 2261 101 0 10 chr10 498211 498517 -145090771 - AluSx SINE Alu -9 303 1 307 273 84 56 chr10 499497 499640 -145089648 + L1ME2 LINE L1 5731 5877 -289 270 111 44 0 chr10 500168 500213 -145089075 + Alu SINE Alu 1 47 -254 199 271 9 75 chr10 500585 500692 -145088596 + L2 LINE L2 2994 3093 -179 240 319 129 0 chr10 500863 500979 -145088309 + L2 LINE L2 3133 3263 -9 337 228 13 0 chr10 502403 502482 -145086806 - MER116 DNA Mariner 0 80 1 666 234 119 23 chr10 502712 502930 -145086358 + MER8 DNA MER2_type 1 239 0 2180 107 47 0 chr10 503320 503618 -145085670 + AluSq SINE Alu 2 313 0 667 284 147 29 chr10 504039 504489 -145084799 + MLT2B2 LTR ERVL 9 511 -4 224 267 0 0 chr10 505633 505693 -145083595 + C-rich Low_complexity Low_complexity 2 61 0 971 258 192 2 chr10 508795 509249 -145080039 - MER92B LTR ERV1 -96 540 1 769 232 135 12 chr10 509483 509742 -145079546 + MLT1A1 LTR MaLR 2 292 -73 958 110 0 7 chr10 510286 510422 -145078866 + AluSg/x SINE Alu 175 309 -1 282 197 159 114 chr10 510810 510942 -145078346 - MLT1E2 LTR MaLR 0 626 489 306 262 63 0 chr10 510970 511096 -145078192 + (CCCCAG)n Simple_repeat Simple_repeat 4 137 0 757 183 0 7 chr10 511600 511737 -145077551 + AluSg/x SINE Alu 177 312 0 282 197 159 114 chr10 512130 512262 -145077026 - MLT1E2 LTR MaLR 0 626 489 377 262 49 12 chr10 512290 512454 -145076834 + (CCCCAG)n Simple_repeat Simple_repeat 4 173 0 560 234 36 12 chr10 512460 512627 -145076661 - MLT1D LTR MaLR -263 242 72 394 216 0 34 chr10 515930 516018 -145073270 - Tigger5 DNA MER2_type -3 2320 2236 243 260 41 27 chr10 516076 516149 -145073139 - Tigger5 DNA MER2_type -2249 74 1 390 165 15 8 chr10 516513 516646 -145072642 + (CA)n Simple_repeat Simple_repeat 2 135 0 1724 253 88 9 chr10 517939 518505 -145070783 + L1MA4 LINE L1 5690 6300 0 681 112 9 0 chr10 518559 518666 -145070622 + MSTA LTR MaLR 2 109 -319 359 70 18 0 chr10 518670 518727 -145070561 + MSTA LTR MaLR 52 109 -319 359 70 18 0 chr10 518731 518788 -145070500 + MSTA LTR MaLR 52 109 -319 359 103 20 13 chr10 518779 518856 -145070432 + MSTA LTR MaLR 45 119 -256 301 123 18 0 chr10 518853 518910 -145070378 + MSTA LTR MaLR 52 109 -319 * 322 98 0 0 chr10 518914 518965 -145070323 + MSTA LTR MaLR 52 102 -326 1609 138 163 9 chr10 518967 519292 -145069996 + MSTA LTR MaLR 45 419 -9 1964 105 17 3 chr10 519929 520223 -145069065 + AluSx SINE Alu 1 298 -14 204 135 27 0 chr10 523525 523562 -145065726 + (CA)n Simple_repeat Simple_repeat 1 38 0 240 329 0 0 chr10 525269 525339 -145063949 + MIR SINE MIR 118 187 -75 792 237 103 9 chr10 527142 527366 -145061922 - MLT1D LTR MaLR -5 500 256 645 137 20 26 chr10 530175 530328 -145058960 + GA-rich Low_complexity Low_complexity 1 152 0 200 246 35 0 chr10 530482 530539 -145058749 + (CTATT)n Simple_repeat Simple_repeat 1 59 0 210 367 0 0 chr10 532380 532557 -145056731 + (CTGGGG)n Simple_repeat Simple_repeat 4 180 0 266 180 16 0 chr10 533106 533167 -145056121 + (CA)n Simple_repeat Simple_repeat 1 62 0 394 273 48 12 chr10 533200 533365 -145055923 + (CATA)n Simple_repeat Simple_repeat 2 172 0 295 214 14 28 chr10 533401 533546 -145055742 + (CATA)n Simple_repeat Simple_repeat 4 146 0 187 354 152 15 chr10 537328 537526 -145051762 + L3b LINE CR1 1109 1333 -250 182 211 26 0 chr10 537563 537601 -145051687 + L3b LINE CR1 1422 1460 -123 216 324 29 0 chr10 538649 538717 -145050571 - L2 LINE L2 -8 3264 3195 247 265 0 33 chr10 539300 539581 -145049707 + GA-rich Low_complexity Low_complexity 1 271 0 266 316 105 7 chr10 543870 544022 -145045266 - MIR SINE MIR -45 217 51 594 234 60 43 chr10 544093 544277 -145045011 + LTR55 LTR ERV 1 187 -361 240 167 179 12 chr10 544663 544747 -145044541 - MER20 DNA MER1_type -55 164 67 234 343 0 0 chr10 545875 545948 -145043340 + MIR3 SINE MIR 124 196 -12 29 28 0 0 chr10 547039 547075 -145042213 + AT_rich Low_complexity Low_complexity 1 36 0 1395 127 5 5 chr10 550409 550621 -145038667 + AluSq SINE Alu 102 313 0 291 307 24 8 chr10 552136 552263 -145037025 - L1MC4 LINE L1 0 8042 7914 283 250 0 42 chr10 553019 553091 -145036197 - MLT1A1 LTR MaLR 0 365 297 294 236 0 42 chr10 553098 553170 -145036118 - MLT1A1 LTR MaLR 0 365 297 1668 188 47 9 chr10 553177 553517 -145035771 - MLT1A1 LTR MaLR 0 365 13 192 305 105 11 chr10 555557 555652 -145033636 - MIR SINE MIR -91 171 68 431 345 0 0 chr10 556418 556595 -145032693 + G-rich Low_complexity Low_complexity 2 178 0 1554 142 38 11 chr10 557619 557886 -145031402 + AluJo SINE Alu 33 306 -6 276 254 82 45 chr10 558077 558211 -145031077 - MER5A DNA MER1_type 0 189 51 1934 107 7 52 chr10 558761 559070 -145030218 + AluSx SINE Alu 1 295 -17 2302 78 3 3 chr10 559072 559378 -145029910 + AluY SINE Alu 1 306 -5 351 310 0 26 chr10 560933 561046 -145028242 + HAL1b LINE L1 376 485 -863 891 238 36 0 chr10 567719 567942 -145021346 + MER8 DNA MER2_type 9 239 0 2242 122 3 3 chr10 569005 569317 -145019971 + AluSx SINE Alu 1 312 0 245 215 11 0 chr10 570691 570784 -145018504 + (CTATA)n Simple_repeat Simple_repeat 1 94 0 729 146 132 6 chr10 570796 571001 -145018287 + MER61D LTR ERV1 1 218 -216 756 119 9 0 chr10 571115 571224 -145018064 - AluSq/x SINE Alu -200 112 3 216 0 0 0 chr10 573187 573211 -145016077 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 190 211 26 0 chr10 574840 574878 -145014410 - L3b LINE CR1 -123 1460 1422 189 349 152 15 chr10 574915 575113 -145014175 - L3b LINE CR1 -250 1333 1109 295 214 14 28 chr10 578895 579040 -145010248 + (TATG)n Simple_repeat Simple_repeat 4 146 0 394 273 48 12 chr10 579076 579241 -145010047 + (TATG)n Simple_repeat Simple_repeat 2 172 0 266 180 16 0 chr10 579274 579335 -145009953 + (TG)n Simple_repeat Simple_repeat 1 62 0 210 367 0 0 chr10 579884 580061 -145009227 + (CCCCAG)n Simple_repeat Simple_repeat 4 180 0 200 112 0 155 chr10 580772 580933 -145008355 + (CAGGT)n Simple_repeat Simple_repeat 1 136 0 3547 162 10 13 chr10 581089 581805 -145007483 + L1 LINE L1 3752 4465 -1681 1945 148 21 0 chr10 581816 582148 -145007140 + L1MA5 LINE L1 5960 6298 -2 645 214 20 70 chr10 583676 583877 -145005411 - MLT1J LTR MaLR -82 429 239 290 228 219 44 chr10 583904 584018 -145005270 - MER5A DNA MER1_type -7 182 49 240 299 13 13 chr10 584035 584112 -145005176 - MLT1J LTR MaLR -298 213 137 255 232 85 6 chr10 584275 584439 -145004849 + (CA)n Simple_repeat Simple_repeat 2 178 0 368 201 88 0 chr10 584480 584639 -145004649 + (CA)n Simple_repeat Simple_repeat 2 174 0 299 186 32 85 chr10 584550 584738 -145004550 + (CACAA)n Simple_repeat Simple_repeat 2 179 0 * 368 355 0 0 chr10 586137 586244 -145003044 + (CA)n Simple_repeat Simple_repeat 1 107 0 543 276 0 0 chr10 586269 586439 -145002849 + (CA)n Simple_repeat Simple_repeat 1 170 0 242 296 82 10 chr10 587569 587667 -145001621 - MIR SINE MIR -65 197 93 24 0 0 0 chr10 590278 590302 -144998986 + AT_rich Low_complexity Low_complexity 1 24 0 2511 80 0 3 chr10 592456 592767 -144996521 + AluSq SINE Alu 1 310 -3 402 21 0 0 chr10 592767 592814 -144996474 + (TA)n Simple_repeat Simple_repeat 2 48 0 180 0 0 0 chr10 593258 593278 -144996010 + (TAA)n Simple_repeat Simple_repeat 2 21 0 2081 131 10 0 chr10 593287 593584 -144995704 + AluSx SINE Alu 3 302 -10 2292 99 0 7 chr10 597664 597956 -144991332 + AluSg SINE Alu 1 290 -20 303 28 0 0 chr10 597956 597992 -144991296 + (TA)n Simple_repeat Simple_repeat 2 37 0 2287 109 0 3 chr10 604199 604503 -144984785 - AluSx SINE Alu -9 303 1 264 54 0 27 chr10 604544 604581 -144984707 + U6 snRNA snRNA 1 36 -71 1355 219 61 48 chr10 604590 604657 -144984631 - MLT1C LTR MaLR 0 467 402 1409 174 77 43 chr10 604657 604956 -144984332 + AluJo SINE Alu 1 309 -3 1355 219 61 48 chr10 604956 605349 -144983939 - MLT1C LTR MaLR -65 402 1 234 247 26 13 chr10 606135 606289 -144982999 + (TG)n Simple_repeat Simple_repeat 1 156 0 317 269 150 57 chr10 606509 606702 -144982586 + HAL1 LINE L1 1912 2122 -385 413 248 113 28 chr10 606710 606851 -144982437 - L1ME LINE L1 -4142 2254 2102 1264 292 112 45 chr10 606866 607916 -144981372 - L1ME LINE L1 -4452 1944 765 4210 126 31 19 chr10 607916 608085 -144981203 - L1MA3 LINE L1 0 6305 6140 2297 103 3 3 chr10 608085 608385 -144980903 - AluSq SINE Alu -9 304 5 4210 126 31 19 chr10 608385 608945 -144980343 - L1MA3 LINE L1 -165 6140 5567 1264 292 112 45 chr10 608945 609052 -144980236 - L1ME LINE L1 -5631 765 667 316 309 78 78 chr10 609389 609619 -144979669 - L1ME LINE L1 -5992 404 175 2115 155 0 0 chr10 609654 609964 -144979324 - AluSg SINE Alu 0 310 1 429 210 89 85 chr10 610168 610429 -144978859 + HAL1 LINE L1 1860 2243 -264 980 120 0 0 chr10 610429 610562 -144978726 + FLAM_C SINE Alu 1 133 0 429 210 89 85 chr10 610562 610666 -144978622 + HAL1 LINE L1 2243 2345 -162 2556 84 0 0 chr10 610669 610979 -144978309 + AluY SINE Alu 1 310 -1 303 254 25 82 chr10 611273 611395 -144977893 - L1ME3 LINE L1 -83 6062 5948 394 215 91 59 chr10 611443 611677 -144977611 - L1ME2 LINE L1 -214 5939 5682 709 268 59 74 chr10 611796 612456 -144976832 - L1ME2 LINE L1 -1317 4812 4163 * 3693 229 121 15 chr10 612455 613483 -144975805 - MSTD-int LTR MaLR -597 1138 2 629 114 5 0 chr10 613493 613597 -144975691 - ALR/Alpha Satellite centromeric -20 151 47 1603 149 221 0 chr10 613597 613905 -144975383 - MSTD LTR MaLR -20 376 1 224 196 0 39 chr10 614107 614158 -144975130 + A-rich Low_complexity Low_complexity 2 50 0 1161 280 82 65 chr10 614316 614638 -144974650 - L1ME2 LINE L1 -2369 3760 3445 954 73 0 22 chr10 614638 614774 -144974514 - L1PA4 LINE L1 0 6155 6023 1161 280 82 65 chr10 614774 615890 -144973398 - L1ME2 LINE L1 -2684 3445 2297 492 281 53 115 chr10 615903 616048 -144973240 - L1ME2 LINE L1 -5073 1046 894 1488 186 0 11 chr10 616048 616312 -144972976 - AluJo SINE Alu -51 261 1 492 281 53 115 chr10 616312 616610 -144972678 - L1ME2 LINE L1 -5225 894 602 239 296 68 68 chr10 616692 616868 -144972420 - L1ME2 LINE L1 -5499 620 445 1301 159 4 35 chr10 617246 617393 -144971895 + AluJb SINE Alu 1 140 -172 2581 100 22 14 chr10 617393 617754 -144971534 + THE1B LTR MaLR 1 364 0 1301 159 4 35 chr10 617754 617838 -144971450 + AluJb SINE Alu 140 225 -87 253 254 0 0 chr10 617838 617897 -144971391 + AluSp/q SINE Alu 178 236 -67 654 198 0 33 chr10 617931 618052 -144971236 + AluSg/x SINE Alu 175 291 -21 250 279 95 62 chr10 618410 618589 -144970699 - MIR3 SINE MIR -1 207 23 324 326 133 15 chr10 619039 619235 -144970053 - L1ME3A LINE L1 -28 6142 5924 864 127 0 0 chr10 619325 619451 -144969837 - FLAM_C SINE Alu -17 126 1 1218 300 54 35 chr10 619459 620318 -144968970 - L1ME3A LINE L1 -264 5906 5032 750 272 80 77 chr10 620345 620933 -144968355 + L1ME LINE L1 6 595 -5475 1568 316 71 60 chr10 621082 621142 -144968146 - L1ME3A LINE L1 -1123 5023 4965 2145 115 3 6 chr10 621142 621455 -144967833 - AluSx SINE Alu 0 312 1 1568 316 71 60 chr10 621455 622055 -144967233 - L1ME3A LINE L1 -1181 4965 4373 2034 124 0 0 chr10 622055 622346 -144966942 - AluSc SINE Alu -18 291 1 1568 316 71 60 chr10 622346 623125 -144966163 - L1ME3A LINE L1 -1773 4373 3567 2037 109 0 0 chr10 624988 625263 -144964025 + AluSx SINE Alu 1 275 -37 180 0 0 0 chr10 625266 625286 -144964002 + (TAA)n Simple_repeat Simple_repeat 2 21 0 23 0 0 0 chr10 626773 626796 -144962492 + AT_rich Low_complexity Low_complexity 1 23 0 456 248 43 0 chr10 627065 627182 -144962106 + L1 LINE L1 5113 5234 -912 * 2597 33 0 0 chr10 627182 627483 -144961805 - AluY SINE Alu -10 301 1 769 185 53 21 chr10 627483 627662 -144961626 + L1MA9 LINE L1 6125 6312 0 242 333 19 0 chr10 627831 627939 -144961349 - L1ME LINE L1 -382 5739 5630 387 316 44 7 chr10 628646 628782 -144960506 - L2 LINE L2 -1 3312 3172 323 283 20 30 chr10 629612 629711 -144959577 - L2 LINE L2 -1 3271 3174 1880 104 11 11 chr10 629980 630110 -144959178 + AluSq SINE Alu 4 133 -180 1991 138 13 0 chr10 630110 630415 -144958873 + AluSp SINE Alu 1 309 -4 1880 104 11 11 chr10 630415 630562 -144958726 + AluSq SINE Alu 132 281 -32 194 0 39 0 chr10 630562 630588 -144958700 + (TAAAA)n Simple_repeat Simple_repeat 5 31 0 235 351 0 47 chr10 632087 632258 -144957030 + (CCCA)n Simple_repeat Simple_repeat 3 165 0 360 307 0 45 chr10 632273 632449 -144956839 + (CCCA)n Simple_repeat Simple_repeat 3 170 0 1976 138 6 3 chr10 633605 633916 -144955372 + AluSx SINE Alu 1 312 0 372 295 35 0 chr10 634318 634491 -144954797 + (CCCTG)n Simple_repeat Simple_repeat 2 180 0 382 278 35 0 chr10 634577 634750 -144954538 + (CCCTG)n Simple_repeat Simple_repeat 2 180 0 223 347 13 0 chr10 634810 634885 -144954403 - MER91B DNA MER1_type -60 130 55 2386 75 0 0 chr10 635626 635931 -144953357 - AluSc SINE Alu -4 305 1 1872 179 7 0 chr10 636913 637221 -144952067 + AluJo SINE Alu 1 310 -2 3526 174 58 8 chr10 637231 637886 -144951402 + L1PA16 LINE L1 5476 6163 -3 324 294 14 21 chr10 638064 638207 -144951081 - HAL1b LINE L1 -1 1347 1206 335 180 20 47 chr10 638766 638916 -144950372 + CT-rich Low_complexity Low_complexity 3 148 0 272 221 9 0 chr10 639047 639160 -144950128 + (TG)n Simple_repeat Simple_repeat 1 114 0 4754 180 96 5 chr10 639276 640894 -144948394 + L1PB4 LINE L1 4369 6153 -3 2105 88 15 0 chr10 642853 643220 -144946068 - AluSx SINE Alu 0 375 5 258 241 37 0 chr10 643376 643430 -144945858 + MER5A DNA MER1_type 109 164 -25 238 236 42 14 chr10 644985 645057 -144944231 + LTR16C LTR ERVL 406 479 -12 238 229 43 14 chr10 645061 645131 -144944157 + LTR16C LTR ERVL 408 479 -12 251 257 40 0 chr10 645135 645209 -144944079 + LTR16C LTR ERVL 408 484 -7 779 224 52 5 chr10 648068 648260 -144941028 + L1MB3 LINE L1 5470 5670 -501 1574 184 14 20 chr10 648260 648411 -144940877 - AluJo SINE Alu -16 296 146 2740 95 16 0 chr10 648411 648780 -144940508 + THE1C LTR MaLR 1 375 0 1574 184 14 20 chr10 648780 648921 -144940367 - AluJo SINE Alu -166 146 6 1851 204 136 0 chr10 648921 649376 -144939912 + L1MB3 LINE L1 5657 6173 -10 853 181 6 6 chr10 652991 653151 -144936137 - AluJb SINE Alu -22 290 131 400 298 133 12 chr10 653720 653996 -144935292 + MLT1A2 LTR MaLR 5 322 -52 2407 75 0 3 chr10 654255 654562 -144934726 - AluSx SINE Alu -4 308 3 1287 140 229 0 chr10 657215 657451 -144931837 + AluJo SINE Alu 1 290 -12 322 317 0 0 chr10 658290 658683 -144930605 + (TG)n Simple_repeat Simple_repeat 1 393 0 1092 166 0 10 chr10 659227 659420 -144929868 + AluJb SINE Alu 116 306 -6 349 222 218 56 chr10 660096 660330 -144928958 + L1M4 LINE L1 4297 4568 -1578 494 264 88 0 chr10 660969 661117 -144928171 + L1M4 LINE L1 4552 4712 -1434 6510 138 36 12 chr10 661118 661805 -144927483 + L1P4 LINE L1 1190 1916 -4933 2100 181 89 26 chr10 661805 662264 -144927024 + LTR2B LTR ERV1 3 490 0 6510 138 36 12 chr10 662264 662703 -144926585 + L1P4 LINE L1 1916 2343 -4506 2572 116 6 3 chr10 662704 663067 -144926221 + THE1B LTR MaLR 1 364 0 5330 106 83 60 chr10 663067 663982 -144925306 + THE1B-int LTR MaLR 1 936 -644 4428 122 47 56 chr10 663951 664658 -144924630 - THE1B-int LTR MaLR -833 747 46 * 2008 120 3 20 chr10 664658 664959 -144924329 - AluSq SINE Alu -17 296 1 4428 122 47 56 chr10 664959 665004 -144924284 - THE1B-int LTR MaLR -1534 46 2 2492 107 19 25 chr10 665005 665370 -144923918 - THE1B LTR MaLR 0 364 2 5376 233 109 10 chr10 665378 665435 -144923853 + L1P4 LINE L1 2348 2398 -4451 405 0 0 0 chr10 665435 665480 -144923808 + (CA)n Simple_repeat Simple_repeat 2 46 0 5376 233 109 10 chr10 665480 667261 -144922027 + L1P4 LINE L1 2398 4371 -2478 4189 161 26 56 chr10 667259 667474 -144921814 + L1P4 LINE L1 5035 5255 -1614 * 2224 82 0 16 chr10 667474 667779 -144921509 - AluY SINE Alu -10 301 2 4189 161 26 56 chr10 667779 668742 -144920546 + L1P4 LINE L1 5255 6163 -706 1705 175 0 7 chr10 668742 669034 -144920254 - AluJo SINE Alu -22 290 1 4189 161 26 56 chr10 669034 669123 -144920165 + L1P4 LINE L1 6163 6253 -616 246 227 82 27 chr10 669490 669600 -144919688 + Charlie5 DNA MER1_type 2441 2556 -56 266 227 61 0 chr10 670746 670812 -144918476 + MER116 DNA Mariner 1 70 -10 192 216 0 0 chr10 671438 671475 -144917813 + L2 LINE L2 1877 1913 -1401 238 209 166 72 chr10 672921 673060 -144916228 + MLT1L LTR MaLR 41 192 -423 401 311 77 23 chr10 673590 673877 -144915411 + L1MEc LINE L1 2219 2525 -3690 343 293 38 9 chr10 674970 675076 -144914212 - L2 LINE L2 -10 3262 3154 474 189 0 0 chr10 675721 675832 -144913456 + GA-rich Low_complexity Low_complexity 3 113 0 367 266 127 11 chr10 676635 676902 -144912386 + L1M4 LINE L1 5062 5359 -787 21 0 0 0 chr10 677352 677373 -144911915 + AT_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr10 679633 679673 -144909615 + AT_rich Low_complexity Low_complexity 1 40 0 23 0 0 0 chr10 680833 680856 -144908432 + GC_rich Low_complexity Low_complexity 1 23 0 2053 114 0 7 chr10 681643 681942 -144907346 - AluSc SINE Alu -12 297 1 191 59 0 29 chr10 681946 681980 -144907308 + (TTA)n Simple_repeat Simple_repeat 1 33 0 288 272 41 20 chr10 683378 683528 -144905760 - MIR SINE MIR -57 151 17 2073 119 0 0 chr10 683788 684081 -144905207 + AluSx SINE Alu 1 293 -19 24 0 0 0 chr10 686302 686326 -144902962 + AT_rich Low_complexity Low_complexity 1 24 0 185 271 21 0 chr10 689491 689539 -144899749 - MIR3 SINE MIR -27 181 133 507 293 55 6 chr10 689577 689741 -144899547 + ERVL LTR ERVL 3223 3394 -2370 306 288 159 6 chr10 691288 691458 -144897830 + LTR50 LTR ERVL 14 209 -586 1643 183 0 0 chr10 692051 692366 -144896922 + AluJo SINE Alu 1 315 0 26 0 0 0 chr10 692842 692868 -144896420 + AT_rich Low_complexity Low_complexity 1 26 0 2226 71 0 7 chr10 694833 695130 -144894158 + AluY SINE Alu 1 295 -16 189 0 0 0 chr10 699117 699138 -144890150 + (T)n Simple_repeat Simple_repeat 1 21 0 355 247 113 20 chr10 699168 699318 -144889970 + L1ME1 LINE L1 36 199 -6197 1621 208 124 47 chr10 699390 699872 -144889416 + L1ME1 LINE L1 469 1007 -5389 2487 58 0 0 chr10 699872 700183 -144889105 - AluY SINE Alu 0 311 1 1621 208 124 47 chr10 700183 700297 -144888991 + L1ME1 LINE L1 1007 1111 -5285 1263 247 138 23 chr10 700365 700892 -144888396 + L1ME1 LINE L1 1392 1979 -4417 1388 104 0 45 chr10 700986 701208 -144888080 + MER30 DNA MER1_type 2 213 -17 1241 198 87 43 chr10 701218 701450 -144887838 + L1ME1 LINE L1 2057 2277 -4119 2169 105 3 0 chr10 701450 701754 -144887534 + AluSc SINE Alu 1 305 -4 1241 198 87 43 chr10 701754 701960 -144887328 + L1ME1 LINE L1 2277 2514 -3882 401 21 0 0 chr10 702710 702757 -144886531 + AluSg SINE Alu 2 48 -262 1074 72 0 0 chr10 702757 702895 -144886393 + AluSg/x SINE Alu 160 297 -15 1793 108 0 0 chr10 703539 703789 -144885499 + AluSg SINE Alu 47 296 -14 28 61 0 0 chr10 703959 704008 -144885280 + AT_rich Low_complexity Low_complexity 1 49 0 414 292 60 0 chr10 704892 705060 -144884228 + L1ME1 LINE L1 3337 3514 -2701 940 292 73 10 chr10 705099 705507 -144883781 + L1ME1 LINE L1 4492 4925 -1290 691 258 55 19 chr10 705553 705824 -144883464 + L1ME1 LINE L1 5026 5306 -909 6106 181 34 6 chr10 705875 707276 -144882012 + L1MC1 LINE L1 4885 6328 -5 2215 235 110 31 chr10 707287 708097 -144881191 + L1ME1 LINE L1 5355 6228 -7 24 32 0 0 chr10 708304 708335 -144880953 + AT_rich Low_complexity Low_complexity 1 31 0 1818 152 3 7 chr10 708709 709005 -144880283 + AluSx SINE Alu 1 295 -17 1963 132 3 3 chr10 710039 710335 -144878953 - AluSc SINE Alu -13 296 1 2234 105 0 0 chr10 711256 711561 -144877727 + AluSq SINE Alu 1 305 -8 457 303 114 56 chr10 714019 714432 -144874856 - L2 LINE L2 -9 3263 2827 367 296 151 29 chr10 714639 714946 -144874342 - L2 LINE L2 -1152 2162 1807 588 299 91 48 chr10 715210 715357 -144873931 + L1MC1 LINE L1 40 179 -6217 2294 80 0 39 chr10 715357 715668 -144873620 - AluSg SINE Alu -11 299 1 588 299 91 48 chr10 715668 716039 -144873249 + L1MC1 LINE L1 179 580 -5816 1655 255 103 7 chr10 716041 716625 -144872663 + L1MC1 LINE L1 607 1246 -5150 556 332 40 12 chr10 716662 716984 -144872304 + L1MC1 LINE L1 1760 2090 -4306 1472 175 183 99 chr10 717056 717424 -144871864 + L1MD3 LINE L1 6701 7036 -959 254 253 0 13 chr10 717424 717499 -144871789 + MLT1F1 LTR MaLR 52 125 -442 1472 175 183 99 chr10 717499 718022 -144871266 + L1MD3 LINE L1 7036 7983 -12 6256 253 108 30 chr10 718026 719020 -144870268 + L1MC1 LINE L1 2179 3094 -3121 2213 114 0 0 chr10 719020 719319 -144869969 - AluSx SINE Alu -9 303 5 6256 253 108 30 chr10 719319 719626 -144869662 + L1MC1 LINE L1 3094 3376 -2839 1731 164 4 4 chr10 719626 719901 -144869387 + AluJb SINE Alu 5 279 -33 6256 253 108 30 chr10 719901 721035 -144868253 + L1MC1 LINE L1 3376 4853 -1362 14068 145 49 15 chr10 721035 721241 -144868047 - Tigger1 DNA MER2_type 0 2418 2220 1999 158 0 0 chr10 721241 721544 -144867744 + AluSx SINE Alu 1 303 -9 14068 145 49 15 chr10 721544 723673 -144865615 - Tigger1 DNA MER2_type -198 2220 4 6256 253 108 30 chr10 723673 723960 -144865328 + L1MC1 LINE L1 4853 5116 -1099 230 239 147 0 chr10 724076 724185 -144865103 + L1MC1 LINE L1 5323 5447 -2407 4849 195 49 12 chr10 724195 725247 -144864041 + L1MCa LINE L1 30 1120 -5306 338 85 0 0 chr10 725265 725312 -144863976 + MER39B LTR ERV1 1 47 -606 1163 133 133 18 chr10 725324 725550 -144863738 + LTR49-int LTR ERV1 375 626 -5705 * 1542 167 141 95 chr10 725548 726032 -144863256 + LTR49-int LTR ERV1 751 1256 -5075 2167 216 62 4 chr10 726034 726709 -144862579 + L1M3 LINE L1 4788 5491 -692 979 118 0 0 chr10 726709 726844 -144862444 + AluSq/x SINE Alu 1 135 -177 2047 118 28 0 chr10 726844 727131 -144862157 + AluSg SINE Alu 1 295 -15 944 141 0 25 chr10 727132 727295 -144861993 + L1M3 LINE L1 5483 5641 -542 4867 152 6 17 chr10 727295 728064 -144861224 + L1MC1 LINE L1 5632 6402 0 1689 234 58 29 chr10 728065 728581 -144860707 + L1ME2 LINE L1 5390 5920 -244 233 200 83 0 chr10 728581 728641 -144860647 + FRAM/FAM SINE Alu 15 79 -87 2360 82 0 0 chr10 728714 729008 -144860280 + AluY SINE Alu 1 294 -17 225 0 0 0 chr10 730096 730121 -144859167 + (A)n Simple_repeat Simple_repeat 1 25 0 2018 97 8 0 chr10 730357 730624 -144858664 + AluY SINE Alu 40 308 -3 2430 43 3 23 chr10 731066 731368 -144857920 - AluY SINE Alu -15 296 1 21 0 0 0 chr10 731516 731537 -144857751 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 732257 732278 -144857010 + AT_rich Low_complexity Low_complexity 1 21 0 2208 103 7 0 chr10 732511 732813 -144856475 + AluSx SINE Alu 1 304 -8 304 307 82 39 chr10 733214 733445 -144855843 + L2 LINE L2 2718 2958 -356 191 327 36 36 chr10 734747 734857 -144854431 + L2 LINE L2 3204 3313 0 21 36 0 0 chr10 734858 734886 -144854402 + AT_rich Low_complexity Low_complexity 1 28 0 343 303 127 0 chr10 735073 735215 -144854073 - MIR SINE MIR -11 251 92 2252 123 0 3 chr10 735418 735726 -144853562 + AluSx SINE Alu 1 307 -5 21 0 0 0 chr10 736216 736237 -144853051 + AT_rich Low_complexity Low_complexity 1 21 0 1787 118 30 61 chr10 737445 737791 -144851497 + AluSx SINE Alu 1 337 0 270 326 11 0 chr10 741635 741727 -144847561 + L1MC4 LINE L1 7826 7918 -124 2131 98 0 11 chr10 741789 742099 -144847189 + AluSx SINE Alu 1 307 0 279 268 103 0 chr10 742767 742864 -144846424 - MIR SINE MIR -57 205 99 543 271 68 23 chr10 743003 743180 -144846108 + MIR SINE MIR 10 194 -68 666 180 34 4 chr10 743376 743525 -144845763 - MSTC LTR MaLR -9 419 271 651 186 6 51 chr10 743532 743688 -144845600 - MSTC LTR MaLR -247 149 1 3640 212 48 60 chr10 743699 743943 -144845345 - MSTC-int LTR MaLR -13 1722 1476 2165 112 10 7 chr10 743943 744248 -144845040 + AluSp SINE Alu 1 306 -7 3640 212 48 60 chr10 744248 745027 -144844261 - MSTC-int LTR MaLR -259 1476 712 1051 186 0 0 chr10 745074 745235 -144844053 + FRAM SINE Alu 1 161 -5 803 164 21 21 chr10 745344 745484 -144843804 + MIR SINE MIR 22 161 -101 590 250 202 27 chr10 745609 746194 -144843094 - L2 LINE L2 -15 3298 2601 357 276 19 0 chr10 746388 746493 -144842795 + L1ME3A LINE L1 6048 6154 -16 1609 148 114 4 chr10 747336 747607 -144841681 - AluJb SINE Alu -1 301 1 2527 73 0 0 chr10 747612 747913 -144841375 - AluSq SINE Alu -12 301 1 1978 125 10 14 chr10 748306 748602 -144840686 + AluSx SINE Alu 1 295 -17 241 140 88 35 chr10 748675 748732 -144840556 - L1 LINE L1 -3326 2820 2761 617 197 21 14 chr10 750016 750158 -144839130 + L1MB8 LINE L1 6027 6169 -9 1783 94 0 0 chr10 750292 750516 -144838772 - AluY SINE Alu -15 296 73 2211 103 6 6 chr10 751133 751444 -144837844 + AluSp SINE Alu 3 313 0 39 22 0 0 chr10 751463 751509 -144837779 + AT_rich Low_complexity Low_complexity 1 46 0 928 118 0 37 chr10 751553 751689 -144837599 + FLAM_C SINE Alu 1 131 -2 32 43 0 0 chr10 751763 751809 -144837479 + AT_rich Low_complexity Low_complexity 1 46 0 21 57 0 0 chr10 752067 752102 -144837186 + AT_rich Low_complexity Low_complexity 1 35 0 1487 207 119 14 chr10 752979 753409 -144835879 + MER39 LTR ERV1 232 706 -1 22 0 0 0 chr10 753711 753733 -144835555 + AT_rich Low_complexity Low_complexity 1 22 0 4702 166 48 45 chr10 753975 754018 -144835270 + L1MA9 LINE L1 5254 5295 -1017 198 0 0 0 chr10 754018 754040 -144835248 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 4702 166 48 45 chr10 754040 754710 -144834578 + L1MA9 LINE L1 5295 5961 -351 1990 122 11 0 chr10 754710 754988 -144834300 + AluSp SINE Alu 2 282 -31 183 42 0 0 chr10 754988 755012 -144834276 + (CA)n Simple_repeat Simple_repeat 1 24 0 4702 166 48 45 chr10 755012 755315 -144833973 + L1MA9 LINE L1 5960 6275 -37 1983 148 6 3 chr10 755329 755640 -144833648 + AluSx SINE Alu 1 312 0 1930 131 7 7 chr10 755643 755934 -144833354 + AluSx SINE Alu 1 291 -21 2058 133 7 7 chr10 755939 756247 -144833041 + AluSx SINE Alu 1 308 -4 3883 145 63 40 chr10 756377 756660 -144832628 - MER6 DNA MER2_type -75 790 515 1817 171 7 0 chr10 756660 756969 -144832319 + AluJb SINE Alu 1 311 -1 3883 145 63 40 chr10 756969 757450 -144831838 - MER6 DNA MER2_type -350 515 9 1715 109 40 8 chr10 757553 757801 -144831487 + AluSx SINE Alu 31 286 -26 183 42 0 0 chr10 758565 758589 -144830699 + (TTA)n Simple_repeat Simple_repeat 1 24 0 608 238 241 52 chr10 758949 759521 -144829767 + L1MC5 LINE L1 7246 7925 -36 2526 55 0 0 chr10 760567 760860 -144828428 - AluY SINE Alu -17 294 2 1975 131 10 29 chr10 760925 761239 -144828049 - AluSx SINE Alu -4 308 1 694 276 43 0 chr10 761500 761710 -144827578 - L1MD3 LINE L1 -170 7825 7607 580 239 81 125 chr10 762250 762916 -144826372 + L1MC5 LINE L1 7273 7909 -52 1963 119 3 7 chr10 762926 763262 -144826026 + AluSx SINE Alu 1 335 0 1410 142 123 26 chr10 763453 763721 -144825567 + AluSx SINE Alu 14 307 -5 23 33 0 0 chr10 763817 763847 -144825441 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr10 763935 763963 -144825325 + AT_rich Low_complexity Low_complexity 1 28 0 608 258 7 20 chr10 764191 764342 -144824946 + Charlie1 DNA MER1_type 2 150 -2611 * 1546 187 68 64 chr10 764326 764813 -144824475 + Charlie1 DNA MER1_type 2272 2760 -1 3526 204 18 63 chr10 764889 765729 -144823559 + L1ME LINE L1 4499 5250 -914 2359 117 0 0 chr10 765729 766038 -144823250 + AluSx SINE Alu 1 309 -3 3526 204 18 63 chr10 766038 766514 -144822774 + L1ME LINE L1 5250 5746 -418 199 321 199 0 chr10 766745 766876 -144822412 - MIR SINE MIR -34 228 72 490 103 15 0 chr10 768088 768156 -144821132 + AluS SINE Alu 2 70 -242 1205 84 0 0 chr10 768305 768447 -144820841 - AluSq/x SINE Alu -171 142 1 26 50 0 0 chr10 768458 768498 -144820790 + AT_rich Low_complexity Low_complexity 1 40 0 1033 203 0 0 chr10 769948 770130 -144819158 + AluJb SINE Alu 130 311 -1 2325 118 0 0 chr10 770302 770606 -144818682 + AluSx SINE Alu 1 304 -8 372 214 309 0 chr10 770606 770774 -144818514 - MLT1F1 LTR MaLR -159 408 189 335 228 43 54 chr10 771372 771464 -144817824 + L1ME LINE L1 5353 5443 -678 991 149 0 0 chr10 771628 771816 -144817472 + FRAM SINE Alu 1 40 0 2207 76 7 28 chr10 771928 772241 -144817047 + AluSq SINE Alu 1 307 0 352 143 0 0 chr10 773039 773095 -144816193 + AluSq/x SINE Alu 80 135 -167 2245 106 0 29 chr10 773095 773234 -144816054 + AluSx SINE Alu 1 142 -170 2595 63 3 0 chr10 773234 773536 -144815752 + AluSp SINE Alu 3 305 -8 2245 106 0 29 chr10 773536 773707 -144815581 + AluSx SINE Alu 142 302 -10 232 247 0 14 chr10 774613 774686 -144814602 - L1MC5 LINE L1 -184 7777 7706 1783 244 86 56 chr10 774826 774968 -144814320 - L1MC4 LINE L1 -117 7925 7789 2509 65 0 10 chr10 774968 775277 -144814011 + AluY SINE Alu 1 306 -5 1783 244 86 56 chr10 775277 775339 -144813949 - L1MC4 LINE L1 -253 7789 7730 2131 105 3 7 chr10 775339 775661 -144813627 + AluSx SINE Alu 3 312 0 1783 244 86 56 chr10 775661 776180 -144813108 - L1MC4 LINE L1 -312 7730 7166 2273 126 0 0 chr10 776180 776482 -144812806 + AluJb SINE Alu 1 302 -10 1783 244 86 56 chr10 776482 776662 -144812626 - L1MC4 LINE L1 -876 7166 6993 2055 121 3 16 chr10 776780 777085 -144812203 - AluSq SINE Alu -12 301 1 226 259 71 24 chr10 777295 777380 -144811908 + L2 LINE L2 3222 3310 -3 1920 99 19 83 chr10 777497 777810 -144811478 + AluSx SINE Alu 20 312 0 1817 161 34 10 chr10 779006 779304 -144809984 - AluJb SINE Alu -3 309 5 241 186 36 0 chr10 779542 779612 -144809676 - L1M3 LINE L1 -587 5593 5522 1145 187 22 85 chr10 779613 779902 -144809386 - L1MC/D LINE L1 -659 5583 5357 1504 161 120 0 chr10 779902 780169 -144809119 - AluJb SINE Alu -13 299 1 1145 187 22 85 chr10 780169 780516 -144808772 - L1MC/D LINE L1 -885 5357 4990 * 1680 250 37 50 chr10 780499 781358 -144807930 - L1MC/D LINE L1 -1397 4749 3951 2217 90 14 3 chr10 781360 781649 -144807639 + AluSx SINE Alu 1 292 -20 207 321 25 12 chr10 781963 782044 -144807244 + MIR3 SINE MIR 78 159 -49 2058 145 3 3 chr10 782215 782511 -144806777 - AluSx SINE Alu -16 296 1 2457 78 3 7 chr10 782957 783264 -144806024 - AluSp SINE Alu -7 306 1 2314 229 77 13 chr10 783547 783634 -144805654 - L1MD1 LINE L1 0 6242 6162 1855 106 4 4 chr10 783634 783888 -144805400 - AluSq SINE Alu -59 254 1 2314 229 77 13 chr10 783888 784478 -144804810 - L1MD1 LINE L1 -80 6162 5522 256 179 34 0 chr10 784534 784602 -144804686 - L1M3 LINE L1 -587 5593 5524 256 179 34 0 chr10 784599 784667 -144804621 - L1M3 LINE L1 -587 5593 5524 * 289 142 35 0 chr10 784664 784732 -144804556 - L1M3 LINE L1 -587 5593 5524 * 313 151 37 0 chr10 784729 784798 -144804490 - L1M3 LINE L1 -659 5583 5523 2409 46 23 29 chr10 787586 787892 -144801396 - AluY SINE Alu -7 304 1 2192 134 0 13 chr10 788397 788711 -144800577 - AluSx SINE Alu -2 310 1 22 0 0 0 chr10 788915 788937 -144800351 + AT_rich Low_complexity Low_complexity 1 22 0 1885 164 13 0 chr10 789037 789342 -144799946 - AluJb SINE Alu -3 309 1 432 324 0 22 chr10 790627 790809 -144798479 + (CCCA)n Simple_repeat Simple_repeat 1 178 0 365 343 0 17 chr10 790827 791008 -144798280 + (CCCA)n Simple_repeat Simple_repeat 1 178 0 350 210 28 39 chr10 791002 791183 -144798105 + CT-rich Low_complexity Low_complexity 2 180 0 * 1781 170 6 20 chr10 791282 791635 -144797653 + L1MC1 LINE L1 5798 6145 -188 2361 109 6 10 chr10 791671 791982 -144797306 + AluSx SINE Alu 2 311 -1 493 235 143 21 chr10 792073 792311 -144796977 + L1MCa LINE L1 31 297 -6129 650 85 21 0 chr10 792361 792455 -144796833 + L1MCa LINE L1 1780 1875 -4551 1053 89 19 0 chr10 792478 792635 -144796653 - MSTB1 LTR MaLR 0 432 273 276 127 36 0 chr10 792634 792689 -144796599 - MSTB1 LTR MaLR -103 329 273 * 261 143 36 0 chr10 792687 792743 -144796545 - MSTB1 LTR MaLR -102 330 273 * 294 107 36 0 chr10 792741 792797 -144796491 - MSTB1 LTR MaLR -102 330 273 241 132 38 0 chr10 792797 792850 -144796438 - MSTB1 LTR MaLR -104 328 274 1630 173 35 0 chr10 792850 793168 -144796120 - MSTB1 LTR MaLR -103 329 1 889 182 53 53 chr10 793173 793255 -144796033 - MLT1B LTR MaLR -163 227 146 2340 105 0 13 chr10 793255 793568 -144795720 + AluSp SINE Alu 1 309 -4 889 182 53 53 chr10 793568 793710 -144795578 - MLT1B LTR MaLR -243 147 3 196 288 17 0 chr10 793710 793769 -144795519 - L2 LINE L2 -1041 2273 2214 814 256 154 50 chr10 793783 794303 -144794985 + MLT1E1 LTR MaLR 69 642 -12 995 201 247 25 chr10 794898 795222 -144794066 - MSTD LTR MaLR 0 396 1 2329 98 0 0 chr10 795319 795616 -144793672 - AluSg SINE Alu -13 297 1 275 85 21 0 chr10 797293 797340 -144791948 + (TG)n Simple_repeat Simple_repeat 1 48 0 1997 161 0 3 chr10 797424 797729 -144791559 + AluJo SINE Alu 1 304 -8 1039 276 87 38 chr10 798165 798752 -144790536 + HAL1 LINE L1 574 1189 -1318 1885 88 0 4 chr10 799015 799253 -144790035 - AluSx SINE Alu -75 237 1 250 337 11 32 chr10 799321 799416 -144789872 + L3 LINE CR1 1482 1574 -3 674 327 77 23 chr10 800092 800441 -144788847 + L3 LINE CR1 900 1267 -310 2018 159 3 16 chr10 800699 801014 -144788274 + AluSx SINE Alu 1 311 -1 445 359 80 11 chr10 801447 801709 -144787579 + L3 LINE CR1 1297 1576 -1 420 313 16 1 chr10 802816 802976 -144786312 + L1ME LINE L1 7 169 -5901 1021 214 102 14 chr10 803102 803279 -144786009 + MSTD LTR MaLR 18 178 -187 2215 117 0 10 chr10 803279 803579 -144785709 - AluSq SINE Alu -16 297 1 1021 214 102 14 chr10 803579 803737 -144785551 + MSTD LTR MaLR 178 356 -9 2446 75 0 0 chr10 804610 804902 -144784386 - AluY SINE Alu -19 292 1 268 346 73 0 chr10 805689 805825 -144783463 + MIR SINE MIR 63 208 -54 185 328 164 8 chr10 805985 806107 -144783181 + MIR SINE MIR 122 262 0 309 241 58 11 chr10 806566 806653 -144782635 + L2 LINE L2 3174 3264 -8 1441 158 39 0 chr10 808383 808650 -144780638 - AluJb SINE Alu 0 321 46 1031 157 0 35 chr10 808653 808825 -144780463 + AluJb SINE Alu 147 312 0 422 136 0 0 chr10 808820 808879 -144780409 - AluJb SINE Alu -247 65 7 * 1379 137 26 0 chr10 808890 809116 -144780172 - MER2 DNA MER2_type -112 233 2 314 191 59 112 chr10 809342 809494 -144779794 - L1MEc LINE L1 -2872 3257 3114 518 283 108 36 chr10 809638 809861 -144779427 - L1MEc LINE L1 -4134 2176 1938 344 308 31 54 chr10 810015 810354 -144778934 - L1MEc LINE L1 -861 1629 1325 364 254 65 43 chr10 810375 810513 -144778775 - L1MEc LINE L1 -4909 1210 1070 925 284 104 7 chr10 810528 810940 -144778348 + LTR33 LTR ERVL 2 453 -68 2296 89 0 0 chr10 810940 811220 -144778068 + AluY SINE Alu 1 280 -31 8434 156 22 4 chr10 811220 812659 -144776629 - MLT1A2-int LTR MaLR -186 1465 1 608 129 0 0 chr10 812661 812754 -144776534 - MSTB LTR MaLR -333 93 1 2179 119 10 0 chr10 812813 813116 -144776172 - AluSg SINE Alu -4 306 1 1841 133 91 3 chr10 813355 813641 -144775647 - AluSx SINE Alu -1 311 1 24 0 0 0 chr10 813653 813677 -144775611 + AT_rich Low_complexity Low_complexity 1 24 0 303 228 114 57 chr10 814604 814634 -144774654 + MLT1I LTR MaLR 280 307 -102 1428 201 28 76 chr10 814634 815027 -144774261 - MLT1A2 LTR MaLR 0 374 1 303 228 114 57 chr10 815027 815119 -144774169 + MLT1I LTR MaLR 307 409 0 22 35 0 0 chr10 815167 815196 -144774092 + AT_rich Low_complexity Low_complexity 1 29 0 1385 139 0 42 chr10 815966 816182 -144773106 + AluSg/x SINE Alu 74 307 0 181 111 0 0 chr10 816182 816209 -144773079 + (TAAA)n Simple_repeat Simple_repeat 4 180 0 245 340 65 22 chr10 816259 816436 -144772852 + MIR SINE MIR 10 193 -67 197 315 67 0 chr10 816600 816695 -144772593 + MIR SINE MIR 150 250 -12 187 295 67 19 chr10 817053 817158 -144772130 - L2 LINE L2 -3 3269 3160 2122 95 3 3 chr10 817918 818214 -144771074 + AluSx SINE Alu 11 306 -6 358 266 101 0 chr10 818472 818581 -144770707 + L3 LINE CR1 664 783 -794 549 228 151 53 chr10 818667 818873 -144770415 + MIR SINE MIR 2 227 -35 2099 87 27 7 chr10 820364 820662 -144768626 - AluSq SINE Alu -9 304 1 1948 145 14 0 chr10 820988 821284 -144768004 - AluSx SINE Alu -12 300 1 213 296 157 35 chr10 821565 821680 -144767608 - L2 LINE L2 0 3313 3185 2407 49 0 19 chr10 821688 821995 -144767293 + AluY SINE Alu 1 301 -10 286 274 123 0 chr10 822436 822509 -144766779 + L2 LINE L2 3136 3217 -55 2714 22 0 0 chr10 822931 823242 -144766046 - AluY SINE Alu 0 311 1 2405 67 0 0 chr10 823366 823664 -144765624 + AluY SINE Alu 1 298 -13 202 191 270 0 chr10 823983 824046 -144765242 - MIR SINE MIR -63 145 66 1962 123 20 7 chr10 824495 824796 -144764492 - AluSx SINE Alu -7 305 1 1859 82 4 0 chr10 825064 825308 -144763980 - AluSq SINE Alu -68 245 1 242 214 107 0 chr10 825382 825438 -144763850 + L2 LINE L2 3211 3272 0 1990 109 7 7 chr10 825506 825816 -144763472 - AluSx SINE Alu 0 310 1 296 265 312 12 chr10 826063 826233 -144763055 - L2 LINE L2 -19 3294 3074 587 279 293 12 chr10 826365 827127 -144762161 - L2 LINE L2 -1050 2264 1289 21 36 0 0 chr10 827322 827350 -144761938 + AT_rich Low_complexity Low_complexity 1 28 0 194 246 56 84 chr10 828114 828256 -144761032 + MER5A DNA MER1_type 10 147 -42 21 0 0 0 chr10 829309 829330 -144759958 + AT_rich Low_complexity Low_complexity 1 21 0 1789 169 0 16 chr10 829330 829643 -144759645 - AluJb SINE Alu 0 312 5 514 290 54 11 chr10 829794 829980 -144759308 - MER3 DNA MER1_type -1 208 15 2046 122 0 13 chr10 830357 830669 -144758619 - AluSq SINE Alu -4 309 2 2126 124 0 0 chr10 830925 831224 -144758064 + AluSq SINE Alu 1 299 -14 2349 63 13 0 chr10 831484 831784 -144757504 - AluY SINE Alu -7 304 1 265 174 22 0 chr10 832810 832856 -144756432 + MER5A DNA MER1_type 2 48 -141 1199 192 35 52 chr10 832856 833159 -144756129 - L1 LINE L1 -3222 3945 3638 2093 119 6 3 chr10 833159 833470 -144755818 - AluSx SINE Alu 0 312 1 1199 192 35 52 chr10 833470 833759 -144755529 - L1 LINE L1 -3529 3638 3252 * 9194 197 81 25 chr10 833744 836377 -144752911 - L1 LINE L1 -4178 2990 181 2168 76 3 10 chr10 836377 836691 -144752597 - AluY SINE Alu 0 311 1 9194 197 81 25 chr10 836691 836880 -144752408 - L1 LINE L1 -6987 181 4 2145 96 3 0 chr10 837604 837895 -144751393 + AluSq SINE Alu 1 292 -21 888 126 0 7 chr10 838700 838835 -144750453 + AluJo SINE Alu 1 134 -178 357 305 177 55 chr10 839112 839379 -144749909 - L1M4 LINE L1 -801 5345 5112 1901 116 35 3 chr10 839379 839663 -144749625 + AluSx SINE Alu 2 294 -18 357 305 177 55 chr10 839663 839982 -144749306 - L1M4 LINE L1 -1034 5112 4687 1605 154 62 0 chr10 840977 841249 -144748039 + AluJb SINE Alu 1 289 -23 1780 114 0 22 chr10 844217 844490 -144744798 - AluSx SINE Alu -4 308 42 202 191 270 0 chr10 845006 845069 -144744219 - MIR SINE MIR -63 145 66 2118 104 3 3 chr10 845520 845818 -144743470 - AluSg SINE Alu -12 298 1 2183 75 20 3 chr10 845820 846114 -144743174 - AluSq SINE Alu -13 300 2 2005 129 10 3 chr10 847539 847842 -144741446 - AluSx SINE Alu -6 306 2 202 294 0 0 chr10 848740 848791 -144740497 - MIR3 SINE MIR -6 202 152 616 156 0 0 chr10 848907 849003 -144740285 + Tigger4(Zombi) DNA MER2_type 1 96 -2635 622 259 0 8 chr10 849039 849170 -144740118 + FLAM_A SINE Alu 2 131 -2 1761 159 6 22 chr10 849172 849486 -144739802 + AluJb SINE Alu 1 309 -3 22 35 0 0 chr10 849486 849515 -144739773 + AT_rich Low_complexity Low_complexity 1 29 0 3278 160 40 5 chr10 849515 850071 -144739217 + Tigger4(Zombi) DNA MER2_type 2156 2730 -1 266 263 132 0 chr10 852063 852139 -144737149 + L2 LINE L2 3168 3253 -19 3676 201 84 22 chr10 852520 852824 -144736464 + MER21B LTR ERV1 1 285 -578 2100 95 0 23 chr10 852824 853129 -144736159 + AluSx SINE Alu 1 298 -14 3676 201 84 22 chr10 853129 853623 -144735665 + MER21B LTR ERV1 285 848 -15 199 167 0 0 chr10 853833 853863 -144735425 + L2 LINE L2 3216 3245 -27 2462 62 0 0 chr10 853913 854218 -144735070 + AluY SINE Alu 1 305 -6 2094 117 0 0 chr10 854404 854702 -144734586 + AluSq SINE Alu 1 298 -15 2307 121 70 17 chr10 854859 855274 -144734014 + LTR23 LTR ERV1 1 437 0 3554 208 54 60 chr10 856152 857094 -144732194 + LTR23-int LTR ERV1 1558 2493 -3838 1070 62 72 135 chr10 857094 857302 -144731986 + MER30 DNA MER1_type 1 195 -35 708 203 172 55 chr10 857318 857492 -144731796 + LTR23-int LTR ERV1 769 984 -4139 1276 145 97 62 chr10 857492 857782 -144731506 + AluJb SINE Alu 1 300 -12 708 203 172 55 chr10 857782 857863 -144731425 + LTR23-int LTR ERV1 984 1054 -4069 319 247 45 11 chr10 857864 857953 -144731335 + MER34C LTR ERV1 241 332 -253 3048 178 95 140 chr10 857963 858563 -144730725 + LTR23-int LTR ERV1 1160 1785 -3338 1570 144 122 0 chr10 858563 858826 -144730462 + AluSg SINE Alu 1 295 -5 3048 178 95 140 chr10 858826 859335 -144729953 + LTR23-int LTR ERV1 1785 2315 -2808 534 77 26 0 chr10 859335 859413 -144729875 + AluSg/x SINE Alu 217 296 -16 1922 102 0 22 chr10 859422 859697 -144729591 + AluSg SINE Alu 6 274 -36 3048 178 95 140 chr10 859697 860075 -144729213 + LTR23-int LTR ERV1 2323 2664 -2459 839 153 8 0 chr10 860075 860206 -144729082 + FRAM SINE Alu 35 166 -10 3587 129 92 48 chr10 860207 860425 -144728863 + LTR23-int LTR ERV1 3810 4017 -2314 2089 67 3 89 chr10 860425 860752 -144728536 + AluY SINE Alu 1 299 -12 3587 129 92 48 chr10 860752 861286 -144728002 + LTR23-int LTR ERV1 4017 4595 -1736 2160 91 3 0 chr10 861315 861601 -144727687 + AluSp SINE Alu 1 287 -26 241 313 50 0 chr10 861869 861949 -144727339 + MIR SINE MIR 97 180 -82 1943 119 0 11 chr10 862015 862300 -144726988 - AluSx SINE Alu -30 282 1 210 42 62 42 chr10 862352 862400 -144726888 + T-rich Low_complexity Low_complexity 3 51 0 1489 151 48 11 chr10 862739 863011 -144726277 + AluJb SINE Alu 1 282 -30 183 254 51 17 chr10 863221 863280 -144726008 - MIR SINE MIR -132 76 16 2089 92 0 35 chr10 863368 863684 -144725604 - AluSq SINE Alu -8 305 1 2057 106 3 13 chr10 864555 864857 -144724431 - AluSx SINE Alu -13 299 1 25 0 0 0 chr10 865244 865269 -144724019 + AT_rich Low_complexity Low_complexity 1 25 0 189 303 112 0 chr10 865400 865489 -144723799 + L2 LINE L2 3195 3293 -20 2089 103 0 0 chr10 865778 866087 -144723201 + AluSx SINE Alu 1 309 0 533 300 55 38 chr10 866503 866740 -144722548 + L2 LINE L2 3069 3309 -4 1260 147 100 47 chr10 867365 867644 -144721644 - AluJo SINE Alu -18 294 1 479 203 0 0 chr10 868239 868318 -144720970 - tRNA-Ser-TCA tRNA tRNA -4 81 3 2005 111 3 10 chr10 868523 868821 -144720467 - AluY SINE Alu -15 296 1 387 0 0 0 chr10 868893 868936 -144720352 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 511 162 0 76 chr10 868938 869043 -144720245 - AluJo SINE Alu -31 281 185 602 224 8 0 chr10 869055 869180 -144720108 - AluJo SINE Alu -186 126 1 1925 130 3 89 chr10 869244 869613 -144719675 + MER1B DNA MER1_type 1 337 0 2362 87 3 0 chr10 870308 870620 -144718668 - AluSp SINE Alu 0 313 1 1790 162 7 0 chr10 870818 871120 -144718168 - AluSx SINE Alu -8 304 1 204 245 82 0 chr10 871354 871403 -144717885 - MIR SINE MIR -126 82 30 321 130 0 0 chr10 872228 872274 -144717014 - tRNA-Gly-GGC tRNA tRNA -28 46 1 24 32 0 0 chr10 872428 872459 -144716829 + AT_rich Low_complexity Low_complexity 1 31 0 2226 61 0 17 chr10 872513 872807 -144716481 - AluY SINE Alu -22 289 1 1961 134 3 3 chr10 872945 873251 -144716037 - AluJb SINE Alu -6 306 1 506 125 313 9 chr10 873278 873390 -144715898 - LTR23 LTR ERV1 0 437 292 505 189 54 0 chr10 873437 873548 -144715740 - LTR23-int LTR ERV1 -223 4900 4784 6021 140 36 12 chr10 873564 874606 -144714682 - LTR23-int LTR ERV1 -663 5668 4602 1507 188 4 4 chr10 874606 874878 -144714410 + AluJo SINE Alu 3 274 -38 307 336 134 16 chr10 875427 875748 -144713540 + L1M2 LINE L1 774 1132 -5717 2173 109 3 0 chr10 876206 876509 -144712779 + AluSp SINE Alu 1 304 -9 642 189 104 25 chr10 876759 876960 -144712328 - Charlie5 DNA MER1_type -16 2596 2380 2182 119 9 0 chr10 877658 877986 -144711302 - L1PA10 LINE L1 -11 6157 5827 442 271 97 20 chr10 878647 878894 -144710394 - L1MC5 LINE L1 -741 7220 6955 251 273 20 10 chr10 879064 879163 -144710125 - L1MC4 LINE L1 -1133 6909 6810 311 317 154 48 chr10 879356 879564 -144709724 - L1MC4a LINE L1 -1037 6771 6542 1648 176 91 18 chr10 879595 879925 -144709363 - MLT1A1 LTR MaLR 0 365 12 2038 118 0 0 chr10 879944 880231 -144709057 - AluSx SINE Alu -25 287 1 918 214 104 6 chr10 880379 880739 -144708549 - L1ME LINE L1 -629 5537 5149 1969 130 31 0 chr10 880771 881063 -144708225 - AluSx SINE Alu -11 301 1 1721 286 113 38 chr10 881063 882421 -144706867 - L1MEc LINE L1 -4928 1468 9 293 233 128 8 chr10 882415 882548 -144706740 - L1ME4a LINE L1 0 6121 5973 * 354 145 0 0 chr10 882623 882692 -144706596 - L1MA4A LINE L1 -5 6298 6230 737 168 74 62 chr10 883504 883717 -144705571 - L1MA7 LINE L1 -52 6941 6739 2684 137 43 2 chr10 883722 883882 -144705406 - L1MA4A LINE L1 -346 5957 5805 285 29 0 0 chr10 883882 883916 -144705372 + (TG)n Simple_repeat Simple_repeat 2 35 0 2684 137 43 2 chr10 883916 884201 -144705087 - L1MA4A LINE L1 -498 5805 5494 * 15534 174 43 18 chr10 884197 885591 -144703697 - L1MA7 LINE L1 -716 6289 4932 2142 116 0 0 chr10 885591 885884 -144703404 - AluSx SINE Alu -19 293 1 15534 174 43 18 chr10 885884 890600 -144698688 - L1MA7 LINE L1 -2073 4932 3 21 0 0 0 chr10 890611 890632 -144698656 + AT_rich Low_complexity Low_complexity 1 21 0 2419 74 0 0 chr10 891465 891776 -144697512 - AluY SINE Alu 0 311 1 301 196 137 20 chr10 891881 891983 -144697305 - L1M4 LINE L1 -1285 4861 4748 480 314 54 4 chr10 892603 892864 -144696424 - L1M4 LINE L1 -1453 4693 4420 34 72 0 0 chr10 893005 893074 -144696214 + AT_rich Low_complexity Low_complexity 1 69 0 1346 199 21 28 chr10 893292 893579 -144695709 - AluJo SINE Alu -25 287 3 3513 167 9 36 chr10 893592 894251 -144695037 - L1MA7 LINE L1 -1 6290 5650 459 228 0 0 chr10 894256 894335 -144694953 + Tigger5 DNA MER2_type 1 79 -2244 2187 136 21 38 chr10 894382 894670 -144694618 - L1MA7 LINE L1 -643 5648 5365 2049 129 7 0 chr10 894670 894964 -144694324 - AluSx SINE Alu -16 296 1 2187 136 21 38 chr10 894964 895152 -144694136 - L1MA7 LINE L1 -926 5365 5175 413 301 98 33 chr10 895135 895471 -144693817 - L1M4 LINE L1 -1735 4411 4054 * 26 0 0 0 chr10 895746 895772 -144693516 + AT_rich Low_complexity Low_complexity 1 26 0 1778 165 42 22 chr10 895772 896129 -144693159 - L1MB3 LINE L1 -7 6176 5813 690 155 66 94 chr10 896131 896312 -144692976 - MLT2B2 LTR ERVL 0 515 340 1289 277 58 16 chr10 896412 897003 -144692285 - L1MDb LINE L1 -3890 2650 2112 4025 190 30 7 chr10 897716 898265 -144691023 + MER44D DNA MER2_type 6 448 -2039 1517 101 8 38 chr10 898265 898503 -144690785 + AluSx SINE Alu 1 231 -81 4025 190 30 7 chr10 898503 898665 -144690623 + MER44D DNA MER2_type 448 605 0 2172 102 3 0 chr10 898694 898997 -144690291 - AluY SINE Alu -7 304 1 1779 212 50 18 chr10 898999 899495 -144689793 - L1MDb LINE L1 -4488 2052 1541 24137 31 2 0 chr10 899510 903154 -144686134 - L1PA3 LINE L1 0 6155 2513 3648 63 9 0 chr10 903158 903618 -144685670 - L1PA3 LINE L1 -5626 520 57 733 237 54 18 chr10 903619 903888 -144685400 - L1MDb LINE L1 -4988 1555 1196 778 80 0 0 chr10 904080 904180 -144685108 - AluSp/q SINE Alu -15 298 199 1370 71 0 0 chr10 904191 904360 -144684928 + AluY SINE Alu 1 169 -142 834 206 17 0 chr10 904468 904643 -144684645 + AluY SINE Alu 111 288 -23 1032 171 0 6 chr10 904669 904850 -144684438 - AluSx SINE Alu -132 180 1 448 247 192 48 chr10 905289 905763 -144683525 + L1M2 LINE L1 756 1297 -5552 230 351 21 64 chr10 905986 906174 -144683114 - L1MDb LINE L1 -6310 230 51 801 324 21 24 chr10 906245 906622 -144682666 - L1MEc LINE L1 -4394 2002 1627 2011 122 0 0 chr10 906688 906975 -144682313 - AluSx SINE Alu -25 287 1 456 300 39 39 chr10 907840 908123 -144681165 + L1MB3 LINE L1 5304 5586 -2222 1075 123 0 7 chr10 908577 908732 -144680556 + FRAM SINE Alu 1 154 -12 1359 191 61 29 chr10 908979 909324 -144679964 + L1MB3 LINE L1 5807 6162 -21 1243 77 0 22 chr10 909325 909490 -144679798 - AluSc SINE Alu -13 296 134 2136 119 7 0 chr10 909490 909793 -144679495 - AluSx SINE Alu -7 305 1 1243 77 0 22 chr10 909793 909808 -144679480 - AluSc SINE Alu -175 134 120 696 188 5 0 chr10 909995 910214 -144679074 + (CA)n Simple_repeat Simple_repeat 1 220 0 516 244 0 0 chr10 910262 910442 -144678846 + (CA)n Simple_repeat Simple_repeat 1 180 0 189 171 0 0 chr10 913390 913425 -144675863 + T-rich Low_complexity Low_complexity 1 35 0 4867 174 16 7 chr10 913433 914410 -144674878 - L1PB4 LINE L1 -3 6153 5171 3242 187 14 6 chr10 914411 915053 -144674235 - L1PB4 LINE L1 -1131 5015 4369 215 244 9 0 chr10 915172 915287 -144674001 + (CA)n Simple_repeat Simple_repeat 1 116 0 318 165 25 41 chr10 915448 915569 -144673719 + GA-rich Low_complexity Low_complexity 2 120 0 1062 184 9 18 chr10 915806 916029 -144673259 - AluSg SINE Alu -52 258 38 2058 118 0 0 chr10 917088 917377 -144671911 + AluSx SINE Alu 11 299 -13 591 285 29 17 chr10 917498 917670 -144671618 + MIR SINE MIR 64 237 -25 517 197 8 47 chr10 917730 917857 -144671431 + MER33 DNA MER1_type 34 155 -169 450 297 27 76 chr10 917867 918130 -144671158 + AluJb SINE Alu 1 250 -52 1790 163 0 0 chr10 918340 918623 -144670665 + AluJb SINE Alu 1 283 -29 238 228 88 0 chr10 919463 919520 -144669768 - AluJ/FLAM SINE Alu -240 62 1 1733 130 23 47 chr10 919599 919899 -144669389 + AluSx SINE Alu 1 293 -19 262 264 11 11 chr10 919900 919987 -144669301 - L1ME LINE L1 -325 5796 5710 183 222 19 56 chr10 920003 920057 -144669231 + L2 LINE L2 3006 3057 -215 30 0 0 0 chr10 921516 921546 -144667742 + AT_rich Low_complexity Low_complexity 1 30 0 180 0 0 0 chr10 921831 921851 -144667437 + (A)n Simple_repeat Simple_repeat 1 20 0 1960 79 120 0 chr10 924150 924416 -144664872 - AluSc SINE Alu 0 299 2 251 250 12 0 chr10 924495 924575 -144664713 + (CCCCAG)n Simple_repeat Simple_repeat 6 86 0 2276 74 0 0 chr10 925906 926203 -144663085 + AluY SINE Alu 1 297 -14 3366 176 18 22 chr10 926883 927122 -144662166 + L1MA4 LINE L1 5590 5828 -472 2295 88 0 3 chr10 927122 927427 -144661861 + AluY SINE Alu 1 304 -7 3366 176 18 22 chr10 927427 927898 -144661390 + L1MA4 LINE L1 5828 6297 -3 21 0 0 0 chr10 927908 927929 -144661359 + AT_rich Low_complexity Low_complexity 1 21 0 1285 201 115 3 chr10 927940 928339 -144660949 - MER31A LTR ERV1 -1 660 11 378 0 0 0 chr10 928939 928981 -144660307 + (CA)n Simple_repeat Simple_repeat 1 42 0 2213 93 0 7 chr10 929186 929488 -144659800 + AluSx SINE Alu 1 300 -12 231 152 0 0 chr10 929887 929933 -144659355 + CT-rich Low_complexity Low_complexity 1 46 0 2195 83 0 7 chr10 930029 930329 -144658959 - AluSx SINE Alu -9 303 6 643 311 27 18 chr10 931073 931292 -144657996 - MIR SINE MIR -4 258 38 231 302 0 0 chr10 931869 931932 -144657356 + HAL1b LINE L1 245 307 -1041 264 269 90 35 chr10 931940 932085 -144657203 + L2 LINE L2 1390 1542 -1772 997 105 0 0 chr10 932092 932225 -144657063 + AluSq/x SINE Alu 1 133 -180 2309 79 0 3 chr10 932227 932532 -144656756 + AluY SINE Alu 1 304 -7 574 264 116 27 chr10 932538 932796 -144656492 + L2 LINE L2 1552 1832 -1482 1904 112 7 17 chr10 933318 933605 -144655683 - AluSx SINE Alu -26 286 3 23 0 0 0 chr10 933690 933713 -144655575 + AT_rich Low_complexity Low_complexity 1 23 0 1473 141 28 8 chr10 933930 934179 -144655109 + AluJb SINE Alu 6 259 -53 1282 195 64 20 chr10 934617 934961 -144654327 - L1M4 LINE L1 -2117 4029 3671 2090 104 3 0 chr10 935078 935367 -144653921 + AluSg SINE Alu 3 292 -18 376 114 46 80 chr10 935487 935662 -144653626 + (TATAA)n Simple_repeat Simple_repeat 4 172 0 24 32 0 0 chr10 935667 935698 -144653590 + AT_rich Low_complexity Low_complexity 1 31 0 596 190 7 49 chr10 935728 935783 -144653505 - L1M4 LINE L1 -2520 3626 3570 2260 92 3 0 chr10 935783 936087 -144653201 - AluSq SINE Alu -8 305 1 596 190 7 49 chr10 936087 936173 -144653115 - L1M4 LINE L1 -2576 3570 3491 1552 107 37 97 chr10 936291 936590 -144652698 - AluSx SINE Alu -7 305 25 2416 47 0 3 chr10 936887 937186 -144652102 - AluY SINE Alu -13 298 1 2177 29 4 7 chr10 938142 938414 -144650874 + AluY SINE Alu 27 297 -14 209 261 0 0 chr10 939005 939051 -144650237 - MIR SINE MIR -5 257 212 2188 90 0 10 chr10 939917 940227 -144649061 - AluSg SINE Alu -3 307 1 269 303 68 15 chr10 940305 940437 -144648851 - L2 LINE L2 -222 3050 2912 554 245 206 12 chr10 940911 941164 -144648124 - L1ME3 LINE L1 -31 6131 5830 231 224 20 0 chr10 941556 941605 -144647683 - L1ME3 LINE L1 -648 5518 5469 276 150 21 16 chr10 941607 941670 -144647618 - L1ME3 LINE L1 -729 5433 5366 2506 167 106 0 chr10 941672 942193 -144647095 - L1MC1 LINE L1 -2 6331 5756 428 221 33 13 chr10 944187 944364 -144644924 + MER20 DNA MER1_type 1 218 -1 2306 81 7 10 chr10 945721 946030 -144643258 - AluSg SINE Alu -2 308 1 538 250 88 7 chr10 948317 948463 -144640825 - MER105 DNA DNA -1 203 46 232 175 0 0 chr10 948463 948503 -144640785 - MER58 DNA MER1_type 0 2420 2381 827 206 122 55 chr10 948505 948743 -144640545 - MER58 DNA MER1_type -86 255 2 1909 153 0 0 chr10 949077 949365 -144639923 - AluSx SINE Alu -18 294 7 285 75 0 0 chr10 949471 949511 -144639777 + (TG)n Simple_repeat Simple_repeat 2 41 0 636 240 8 0 chr10 949676 949797 -144639491 + MER2 DNA MER2_type 1 122 -223 738 226 7 0 chr10 949809 949946 -144639342 + Tigger3(Golem) DNA MER2_type 5 142 -2887 528 155 68 142 chr10 949944 950092 -144639196 + Tigger3(Golem) DNA MER2_type 2773 2909 -120 * 345 267 155 0 chr10 950589 950705 -144638583 + Tigger3(Golem) DNA MER2_type 2888 3021 -8 778 162 146 22 chr10 950722 950907 -144638381 + MER2 DNA MER2_type 138 345 0 533 137 226 32 chr10 950986 951110 -144638178 - AluSg/x SINE Alu -29 283 136 21 0 0 0 chr10 951897 951918 -144637370 + GC_rich Low_complexity Low_complexity 1 21 0 1834 131 14 0 chr10 952739 953030 -144636258 - AluSp SINE Alu -18 295 1 624 203 199 16 chr10 953144 953395 -144635893 - Charlie1 DNA MER1_type 0 2761 2465 2913 160 71 11 chr10 953430 953968 -144635320 - MER6A DNA MER2_type 0 605 36 3088 178 44 58 chr10 953982 954770 -144634518 - Charlie1 DNA MER1_type -397 2364 1588 * 3923 203 110 92 chr10 954758 954961 -144634327 - Tigger1 DNA MER2_type -210 2208 2010 2065 118 0 0 chr10 954961 955249 -144634039 - AluSg SINE Alu -22 288 1 3923 203 110 92 chr10 955249 956091 -144633197 - Tigger1 DNA MER2_type -408 2010 1185 1549 134 17 0 chr10 956091 956323 -144632965 - AluSx SINE Alu -19 293 58 3923 203 110 92 chr10 956323 956865 -144632423 - Tigger1 DNA MER2_type -1233 1185 654 1150 111 0 33 chr10 956865 957045 -144632243 - AluJo SINE Alu -15 297 124 3923 203 110 92 chr10 957045 957423 -144631865 - Tigger1 DNA MER2_type -1764 654 1 1885 190 114 12 chr10 957838 958260 -144631028 + MLT1C LTR MaLR 1 465 -2 2224 62 7 0 chr10 959276 959564 -144629724 - AluSg SINE Alu -20 290 1 327 337 54 30 chr10 961459 961625 -144627663 - L3 LINE CR1 -423 1154 985 214 342 111 0 chr10 961663 961780 -144627508 + MIR SINE MIR 73 202 -60 626 328 111 32 chr10 961842 962275 -144627013 - L3 LINE CR1 -605 972 506 2013 122 0 3 chr10 962554 962850 -144626438 + AluSx SINE Alu 1 295 -17 194 309 0 0 chr10 963066 963121 -144626167 - L2 LINE L2 -1 3271 3217 2157 154 3 11 chr10 963578 963929 -144625359 + MER7A DNA MER2_type 1 346 0 262 305 86 51 chr10 964045 964242 -144625046 + L2 LINE L2 926 1129 -2185 251 133 22 22 chr10 964256 964268 -144625020 - MER46A DNA MER2_type -83 153 142 1149 176 134 58 chr10 964268 964424 -144624864 + MER46B DNA MER2_type 3 71 -2660 1867 135 7 3 chr10 964424 964720 -144624568 + AluSx SINE Alu 1 297 -15 1149 176 134 58 chr10 964720 964876 -144624412 + MER46B DNA MER2_type 71 214 -22 1932 293 67 30 chr10 965577 965672 -144623616 + L1MDa LINE L1 21 111 -6429 1920 140 7 0 chr10 965672 965965 -144623323 + AluSg SINE Alu 1 295 -15 1932 293 67 30 chr10 965965 966614 -144622674 + L1MDa LINE L1 111 793 -5747 4344 202 175 20 chr10 966659 967450 -144621838 + L1MDa LINE L1 874 1541 -4999 2096 106 13 10 chr10 967450 967761 -144621527 - AluSx SINE Alu 0 312 1 4344 202 175 20 chr10 967761 968348 -144620940 + L1MDa LINE L1 1541 2466 -4074 2112 246 92 30 chr10 968356 968988 -144620300 + L1MB8 LINE L1 3776 4367 -1875 2187 85 0 3 chr10 968988 969282 -144620006 - AluY SINE Alu -18 293 1 2112 246 92 30 chr10 969282 969583 -144619705 + L1MB8 LINE L1 4367 4648 -1594 2335 96 59 31 chr10 969583 969937 -144619351 - THE1B LTR MaLR 0 364 1 2112 246 92 30 chr10 969937 970616 -144618672 + L1MB8 LINE L1 4648 5489 -753 * 2150 154 27 36 chr10 970613 971054 -144618234 + L1MA4A LINE L1 5674 6110 -193 2039 47 95 0 chr10 971066 971340 -144617948 + AluY SINE Alu 1 300 -11 280 227 40 0 chr10 971348 971423 -144617865 + L1MA4A LINE L1 6182 6259 -44 2160 201 121 53 chr10 971435 972081 -144617207 + L1MB8 LINE L1 5473 6162 -16 1698 248 127 19 chr10 972083 972237 -144617051 + L1MD2 LINE L1 5587 5723 -636 180 0 0 0 chr10 972237 972257 -144617031 + (TA)n Simple_repeat Simple_repeat 2 21 0 1698 248 127 19 chr10 972257 972788 -144616500 + L1MD2 LINE L1 5723 6346 -13 2041 132 0 7 chr10 972790 973093 -144616195 + AluSx SINE Alu 1 301 -11 713 192 215 0 chr10 974524 974743 -144614545 + MER33 DNA MER1_type 55 320 -4 22 0 0 0 chr10 974840 974862 -144614426 + AT_rich Low_complexity Low_complexity 1 22 0 1816 118 21 0 chr10 975317 975597 -144613691 - AluSp SINE Alu -25 288 3 1595 177 21 67 chr10 976560 976933 -144612355 - MLT1B LTR MaLR 0 390 35 702 215 44 39 chr10 976948 977153 -144612135 + MER3 DNA MER1_type 1 206 -3 200 232 54 18 chr10 978168 978224 -144611064 + MIR SINE MIR 93 150 -112 1553 70 0 19 chr10 978264 978477 -144610811 - L1PA7 LINE L1 0 6154 5946 2112 111 7 0 chr10 978767 979065 -144610223 - AluSx SINE Alu -12 300 1 2212 101 0 0 chr10 979520 979817 -144609471 + AluY SINE Alu 1 297 -14 1676 98 161 4 chr10 979884 980139 -144609149 + AluSc SINE Alu 2 296 -3 22 56 0 0 chr10 980896 980932 -144608356 + AT_rich Low_complexity Low_complexity 1 36 0 426 154 56 58 chr10 981202 981304 -144607984 - MLT1E2 LTR MaLR 0 626 468 30 0 0 0 chr10 981327 981357 -144607931 + AT_rich Low_complexity Low_complexity 1 30 0 803 147 0 0 chr10 981817 981933 -144607355 - FLAM_C SINE Alu -23 120 5 2112 123 0 0 chr10 982207 982507 -144606781 - AluSx SINE Alu -12 300 1 2117 98 27 0 chr10 982652 982947 -144606341 - AluSg SINE Alu -7 303 1 2343 68 0 13 chr10 983269 983576 -144605712 + AluY SINE Alu 1 303 -8 2195 92 0 13 chr10 984317 984621 -144604667 + AluSg SINE Alu 1 300 -10 432 167 94 10 chr10 984736 984832 -144604456 + AluJb SINE Alu 191 294 -18 213 204 0 74 chr10 985290 985659 -144603629 + (CTGGGG)n Simple_repeat Simple_repeat 1 341 0 224 318 124 8 chr10 986486 986615 -144602673 + MIR3 SINE MIR 44 187 -21 2159 92 3 0 chr10 988087 988382 -144600906 + AluSg SINE Alu 1 296 -14 1835 94 7 42 chr10 988469 988778 -144600510 + AluY SINE Alu 1 298 -13 935 417 41 17 chr10 992814 993109 -144596179 - AluSx SINE Alu 0 302 1 8107 138 50 38 chr10 995291 996731 -144592557 - Tigger1 DNA MER2_type -960 1458 1 390 265 108 64 chr10 997529 997733 -144591555 - HAL1 LINE L1 -2268 239 27 1176 131 0 0 chr10 997809 997984 -144591304 - AluSg/x SINE Alu -17 295 121 21 0 0 0 chr10 997984 998005 -144591283 + AT_rich Low_complexity Low_complexity 1 21 0 1983 124 3 0 chr10 998005 998296 -144590992 - AluSx SINE Alu -20 292 1 2461 53 3 0 chr10 999736 1000040 -144589248 + AluY SINE Alu 1 305 -6 799 95 112 0 chr10 1000062 1000178 -144589110 + AluSg SINE Alu 2 130 -180 296 54 0 0 chr10 1000210 1000247 -144589041 - Alu SINE Alu -9 291 255 489 111 0 0 chr10 1000369 1000441 -144588847 - AluS SINE Alu -236 73 2 1144 163 5 45 chr10 1000462 1000683 -144588605 + AluJb SINE Alu 99 310 -2 690 280 57 0 chr10 1002028 1002221 -144587067 - MER58A DNA MER1_type -15 209 6 976 225 86 47 chr10 1004207 1004567 -144584721 + MLT1A2 LTR MaLR 1 374 0 1814 251 116 21 chr10 1004567 1005239 -144584049 + MLT1A2-int LTR MaLR 1 736 -635 309 262 36 0 chr10 1005359 1005443 -144583845 + MLT1A2-int LTR MaLR 686 772 -963 1766 251 21 23 chr10 1005502 1005977 -144583311 + MLT1A2-int LTR MaLR 1262 1735 0 623 226 11 45 chr10 1005985 1006162 -144583126 + MLT1A2 LTR MaLR 9 179 -195 2284 74 3 3 chr10 1006215 1006513 -144582775 - AluSc SINE Alu -11 298 1 414 320 5 2 chr10 1006540 1006723 -144582565 + MLT1B LTR MaLR 190 374 0 1746 166 47 52 chr10 1009070 1009455 -144579833 - MLT1B LTR MaLR -7 383 1 312 304 97 32 chr10 1009616 1009833 -144579455 + L2 LINE L2 2945 3175 -138 1944 170 77 20 chr10 1010258 1010659 -144578629 - MSTA LTR MaLR 0 428 5 227 321 0 57 chr10 1010671 1010777 -144578511 + L2 LINE L2 3127 3226 -87 1342 230 88 65 chr10 1011966 1012601 -144576687 - MLT1E1 LTR MaLR 0 654 5 245 309 21 69 chr10 1013642 1013683 -144575605 + L2 LINE L2 2305 2346 -968 2405 45 0 0 chr10 1013683 1013974 -144575314 - AluY SINE Alu -20 291 1 245 309 21 69 chr10 1013974 1014120 -144575168 + L2 LINE L2 2346 2483 -831 198 0 0 0 chr10 1014400 1014422 -144574866 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 2075 103 0 0 chr10 1014425 1014706 -144574582 - AluSx SINE Alu -31 281 1 239 236 33 26 chr10 1015317 1015411 -144573877 - L1MC5 LINE L1 -10 7916 7679 656 271 73 50 chr10 1015960 1016300 -144572988 - L1MC4 LINE L1 -197 7845 7498 2034 67 63 25 chr10 1017333 1017618 -144571670 + AluSp SINE Alu 1 296 -17 1222 111 0 0 chr10 1019780 1019942 -144569346 - AluSg/x SINE Alu -2 310 149 12852 153 48 12 chr10 1019952 1021839 -144567449 + Tigger1 DNA MER2_type 15 2002 -416 2297 124 0 3 chr10 1021839 1022145 -144567143 - AluSx SINE Alu -7 305 1 12852 153 48 12 chr10 1022145 1022578 -144566710 + Tigger1 DNA MER2_type 2002 2418 0 348 359 0 0 chr10 1023901 1024043 -144565245 - L1PB4 LINE L1 -9 6147 6006 634 215 29 53 chr10 1024231 1024440 -144564848 - L1PB4 LINE L1 -135 6021 5818 1916 155 3 10 chr10 1024932 1025242 -144564046 - AluJb SINE Alu -4 308 1 234 224 20 0 chr10 1027654 1027703 -144561585 + L2 LINE L2 3259 3308 -5 1108 214 59 2 chr10 1031143 1031549 -144557739 - L1MB4 LINE L1 -6 6174 5698 1854 153 43 3 chr10 1082125 1082407 -144506881 + AluSx SINE Alu 1 293 -19 208 170 38 0 chr10 1084046 1084099 -144505189 + CT-rich Low_complexity Low_complexity 2 56 0 2148 118 17 0 chr10 1084099 1084388 -144504900 - AluSg SINE Alu -16 294 1 186 294 96 75 chr10 1085836 1085982 -144503306 + MIR SINE MIR 58 206 -56 2596 229 74 14 chr10 1088430 1089330 -144499958 + L1MCa LINE L1 748 1792 -4634 1751 258 56 16 chr10 1089434 1090078 -144499210 - L1M4 LINE L1 -1980 4166 3497 294 296 157 26 chr10 1090206 1090629 -144498659 + L1ME3A LINE L1 5138 5628 -542 385 295 66 24 chr10 1090664 1090830 -144498458 + MER5A DNA MER1_type 16 188 -1 268 245 32 0 chr10 1090985 1091079 -144498209 + L1ME3A LINE L1 5855 5951 -219 1796 122 0 4 chr10 1091198 1091453 -144497835 - AluJb SINE Alu 0 312 59 390 248 8 48 chr10 1091935 1092060 -144497228 - MARNA DNA Mariner -345 241 122 280 267 30 30 chr10 1092333 1092390 -144496898 - L1MA10 LINE L1 0 6334 6278 1343 241 73 27 chr10 1092390 1092918 -144496370 - L1ME1 LINE L1 -44 6122 5550 650 216 63 11 chr10 1092916 1093106 -144496182 + L1MCa LINE L1 16 215 -6211 * 1092 256 46 3 chr10 1096813 1097180 -144492108 - L1ME1 LINE L1 -2719 3427 3045 245 304 78 9 chr10 1097790 1097905 -144491383 - Charlie7 DNA MER1_type -736 1876 1754 492 241 76 19 chr10 1098843 1099001 -144490287 + Charlie8 DNA MER1_type 72 238 -2179 325 228 79 44 chr10 1099212 1099326 -144489962 - L1MC4 LINE L1 -1 8041 7924 5864 142 13 25 chr10 1099370 1100119 -144489169 - L1MC1 LINE L1 -8 6325 5591 2225 127 42 23 chr10 1100119 1100473 -144488815 + THE1B LTR MaLR 2 362 -2 5864 142 13 25 chr10 1100473 1100752 -144488536 - L1MC1 LINE L1 -742 5591 5310 1047 101 0 0 chr10 1100752 1100891 -144488397 - AluY SINE Alu -6 305 167 276 80 21 0 chr10 1100891 1100955 -144488333 - L1MC1 LINE L1 -850 5296 5232 2774 219 58 32 chr10 1101085 1102066 -144487222 - L1MDa LINE L1 -2820 3720 2714 1049 163 6 0 chr10 1102070 1102266 -144487022 - AluJo SINE Alu 0 322 126 3083 207 56 41 chr10 1102268 1103228 -144486060 - L1MDa LINE L1 -3834 2706 1740 1721 88 4 9 chr10 1103228 1103456 -144485832 - AluY SINE Alu -6 305 79 371 238 6 0 chr10 1104217 1104389 -144484899 + CT-rich Low_complexity Low_complexity 2 174 0 257 122 67 22 chr10 1104405 1104495 -144484793 + (TCTCTG)n Simple_repeat Simple_repeat 2 95 0 198 204 45 0 chr10 1106446 1106490 -144482798 - MIR3 SINE MIR -52 156 111 665 263 148 31 chr10 1106744 1107196 -144482092 + MLT1D LTR MaLR 1 505 0 2453 84 7 0 chr10 1109426 1109735 -144479553 + AluSx SINE Alu 1 311 -1 236 262 0 0 chr10 1111965 1112026 -144477262 - MLT1J LTR MaLR -3 508 448 259 332 40 60 chr10 1112151 1112350 -144476938 - MLT1J LTR MaLR -60 451 257 406 238 90 0 chr10 1112625 1112747 -144476541 + LTR16C LTR ERVL 359 491 0 2409 65 7 3 chr10 1113251 1113541 -144475747 - AluSc SINE Alu -11 298 8 350 307 84 12 chr10 1115791 1115957 -144473331 + MIR SINE MIR 78 255 -7 453 246 48 0 chr10 1116143 1116269 -144473019 - L1MA6 LINE L1 0 6300 6169 230 156 11 113 chr10 1116275 1116461 -144472827 + (CAT)n Simple_repeat Simple_repeat 2 168 0 2256 189 90 63 chr10 1116826 1117446 -144471842 - L1MA6 LINE L1 -106 6194 5558 371 294 88 19 chr10 1117447 1117607 -144471681 - MIR3 SINE MIR -7 201 31 7590 19 14 0 chr10 1119776 1121259 -144468029 + L1PA2 LINE L1 4695 6174 0 7453 32 7 7 chr10 1121259 1122229 -144467059 + L1PA4 LINE L1 5177 6146 -9 1057 141 0 22 chr10 1123222 1123589 -144465699 + (CACCAT)n Simple_repeat Simple_repeat 1 360 0 2002 102 17 7 chr10 1124496 1124789 -144464499 - AluSq SINE Alu -17 296 1 190 276 86 60 chr10 1126412 1126528 -144462760 - MIR SINE MIR -80 182 64 324 230 27 14 chr10 1127088 1127236 -144462052 + (CA)n Simple_repeat Simple_repeat 1 150 0 338 268 27 18 chr10 1127258 1127370 -144461918 + (CA)n Simple_repeat Simple_repeat 1 113 0 320 245 132 19 chr10 1128422 1128528 -144460760 + L2 LINE L2 3180 3297 -16 1509 166 0 98 chr10 1129381 1129719 -144459569 - AluJb SINE Alu -7 305 1 2317 86 3 0 chr10 1130656 1130957 -144458331 + AluY SINE Alu 1 302 -9 2091 95 3 3 chr10 1132762 1133057 -144456231 - AluSc SINE Alu -14 295 1 1052 75 0 0 chr10 1133676 1133809 -144455479 + AluJb SINE Alu 7 139 -173 289 333 56 0 chr10 1140293 1140401 -144448887 + MIR SINE MIR 57 170 -92 198 0 0 0 chr10 1141356 1141378 -144447910 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 680 271 29 6 chr10 1141438 1141608 -144447680 - MER45A DNA AcHobo -4 174 1 226 227 0 0 chr10 1144447 1144491 -144444797 + T-rich Low_complexity Low_complexity 4 47 0 791 234 70 42 chr10 1146330 1146767 -144442521 - MLT1D LTR MaLR 0 467 5 207 311 78 0 chr10 1147697 1147787 -144441501 + MIR SINE MIR 17 113 -149 1963 91 39 11 chr10 1148535 1148821 -144440467 + AluY SINE Alu 1 294 -17 374 315 109 14 chr10 1149486 1149928 -144439360 - L1MEc LINE L1 -4656 1875 1236 1446 251 11 36 chr10 1149962 1150361 -144438927 + MLT2D LTR ERVL 1 533 -21 288 39 39 20 chr10 1150361 1150412 -144438876 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 237 301 100 35 chr10 1150413 1150752 -144438536 - L1MEc LINE L1 -5014 1402 1042 192 40 0 0 chr10 1151255 1151280 -144438008 + (T)n Simple_repeat Simple_repeat 1 25 0 450 289 179 10 chr10 1151945 1152246 -144437042 + L2 LINE L2 2960 3311 -2 28 48 0 0 chr10 1152409 1152451 -144436837 + AT_rich Low_complexity Low_complexity 1 42 0 885 152 0 0 chr10 1152633 1152765 -144436523 - FLAM_C SINE Alu 0 133 2 273 245 0 0 chr10 1155477 1155530 -144433758 + (CGGG)n Simple_repeat Simple_repeat 4 56 0 883 141 0 22 chr10 1157972 1158107 -144431181 - AluJo/FLAM SINE Alu -170 132 1 415 149 0 103 chr10 1158107 1158205 -144431083 - AluJ/FRAM SINE Alu -7 305 217 * 825 158 0 22 chr10 1158203 1158342 -144430946 - AluJo SINE Alu -175 137 2 301 294 100 6 chr10 1159411 1159571 -144429717 - MER5B DNA MER1_type -3 175 1 707 224 38 6 chr10 1159682 1159865 -144429423 + MER5A DNA MER1_type 1 189 0 258 297 15 123 chr10 1160135 1160330 -144428958 + L1MC/D LINE L1 5611 5784 -2024 445 281 26 0 chr10 1161475 1161628 -144427660 + MLT1A1 LTR MaLR 153 309 -56 2098 88 7 3 chr10 1162929 1163212 -144426076 + AluSx SINE Alu 1 284 -28 327 234 105 16 chr10 1164106 1164230 -144425058 - MLT1C LTR MaLR -6 461 327 180 320 172 8 chr10 1164600 1164722 -144424566 - L2 LINE L2 -20 3252 3111 209 264 22 22 chr10 1165112 1165290 -144423998 + (CACCAT)n Simple_repeat Simple_repeat 1 178 0 288 260 14 14 chr10 1165414 1165560 -144423728 + (CACCAT)n Simple_repeat Simple_repeat 3 148 0 188 33 0 33 chr10 1166940 1166970 -144422318 + (TCCC)n Simple_repeat Simple_repeat 2 30 0 353 132 72 24 chr10 1167338 1167505 -144421783 + (CA)n Simple_repeat Simple_repeat 1 175 0 181 159 65 41 chr10 1167490 1167660 -144421628 + (CACAC)n Simple_repeat Simple_repeat 2 175 0 * 321 119 73 26 chr10 1167635 1167786 -144421502 + (CA)n Simple_repeat Simple_repeat 1 158 0 252 149 75 15 chr10 1167822 1167956 -144421332 + (CA)n Simple_repeat Simple_repeat 1 142 0 286 90 56 34 chr10 1168069 1168158 -144421130 + (TG)n Simple_repeat Simple_repeat 1 91 0 370 309 0 4 chr10 1170402 1170642 -144418646 + (CA)n Simple_repeat Simple_repeat 1 238 0 192 77 0 0 chr10 1172328 1172354 -144416934 + (CAT)n Simple_repeat Simple_repeat 1 26 0 22955 47 10 3 chr10 1172729 1175675 -144413613 + L1P LINE L1 1 2966 -3180 23967 34 4 1 chr10 1175775 1178810 -144410478 - L1P LINE L1 -1044 5102 2058 225 234 0 0 chr10 1178863 1178927 -144410361 + GA-rich Low_complexity Low_complexity 2 65 0 207 379 0 0 chr10 1182409 1182512 -144406776 - MER5A DNA MER1_type -3 186 84 258 274 52 44 chr10 1184526 1184661 -144404627 + L3b LINE CR1 1326 1461 -122 1491 180 20 108 chr10 1184991 1185391 -144403897 - MLT1A1 LTR MaLR 0 365 1 2815 133 17 2 chr10 1185452 1185920 -144403368 - L1MC1 LINE L1 -179 6154 5680 394 296 33 19 chr10 1185924 1186137 -144403151 - L1 LINE L1 -1127 5019 4804 1583 150 8 0 chr10 1186294 1186560 -144402728 - MSTB2 LTR MaLR 0 457 190 1072 180 57 12 chr10 1186556 1186801 -144402487 - MSTB2 LTR MaLR -201 256 1 * 487 330 59 33 chr10 1186847 1187307 -144401981 - L1 LINE L1 -1525 4621 4150 258 32 0 0 chr10 1187389 1187420 -144401868 + (TG)n Simple_repeat Simple_repeat 1 31 0 1742 171 0 7 chr10 1187586 1187879 -144401409 - AluJo SINE Alu -21 291 1 12042 25 7 2 chr10 1189527 1191697 -144397591 + L1PA4 LINE L1 3973 6146 -9 226 76 108 32 chr10 1193612 1193769 -144395519 + (TCTA)n Simple_repeat Simple_repeat 3 171 0 181 116 23 23 chr10 1193806 1193849 -144395439 + (TCTA)n Simple_repeat Simple_repeat 3 45 0 249 349 47 28 chr10 1193850 1193956 -144395332 - L2 LINE L2 -19 3253 3146 1276 216 103 25 chr10 1194045 1194443 -144394845 + MER63B DNA MER1_type 4 432 -4 456 161 0 72 chr10 1195584 1195777 -144393511 + (CAGAGA)n Simple_repeat Simple_repeat 2 180 0 376 309 72 59 chr10 1199757 1200061 -144389227 - MER58B DNA MER1_type -8 333 26 346 363 32 0 chr10 1200069 1200226 -144389062 + MIR SINE MIR 46 207 -55 2394 103 0 0 chr10 1200484 1200794 -144388494 - AluSx SINE Alu -2 310 1 376 309 72 59 chr10 1202441 1202745 -144386543 - MER58B DNA MER1_type -8 333 26 346 363 32 0 chr10 1202753 1202910 -144386378 + MIR SINE MIR 46 207 -55 853 203 98 0 chr10 1203168 1203331 -144385957 - AluJb SINE Alu -2 310 132 2962 200 80 7 chr10 1203331 1204217 -144385071 + L1MB3 LINE L1 5152 6100 -83 2116 125 0 55 chr10 1204714 1205041 -144384247 - AluSx SINE Alu -3 309 1 1691 176 0 14 chr10 1205189 1205484 -144383804 - AluJo SINE Alu -11 301 11 2285 112 13 0 chr10 1205490 1205795 -144383493 - AluSx SINE Alu -3 309 1 231 366 0 38 chr10 1207089 1207272 -144382016 + C-rich Low_complexity Low_complexity 4 179 0 1968 138 43 0 chr10 1208000 1208282 -144381006 + AluSx SINE Alu 1 294 -18 19095 49 2 4 chr10 1212337 1215530 -144373758 - L1PA4 LINE L1 -1 6154 2969 25462 32 6 3 chr10 1216239 1220130 -144369158 + L1PA4 LINE L1 2151 6052 -103 186 294 96 75 chr10 1221074 1221220 -144368068 + MIR SINE MIR 58 206 -56 421 317 45 40 chr10 1222736 1222960 -144366328 + HAL1 LINE L1 977 1201 -1306 304 308 81 5 chr10 1223168 1223389 -144365899 + HAL1 LINE L1 1512 1749 -758 186 294 96 75 chr10 1224995 1225141 -144364147 + MIR SINE MIR 58 206 -56 421 317 45 40 chr10 1226793 1227017 -144362271 + HAL1 LINE L1 977 1201 -1306 304 308 81 5 chr10 1227225 1227446 -144361842 + HAL1 LINE L1 1512 1749 -758 268 255 179 33 chr10 1228160 1228372 -144360916 + HAL1 LINE L1 2265 2507 0 213 240 40 0 chr10 1229106 1229156 -144360132 + C-rich Low_complexity Low_complexity 1 52 0 317 295 67 0 chr10 1229332 1229437 -144359851 + L2 LINE L2 3184 3295 -18 667 293 29 3 chr10 1229448 1229652 -144359636 - MIR SINE MIR 0 262 55 285 211 18 26 chr10 1231563 1231677 -144357611 + (CA)n Simple_repeat Simple_repeat 1 113 0 474 296 107 26 chr10 1231861 1232094 -144357194 + MIR SINE MIR 7 258 -4 619 249 107 29 chr10 1232809 1233160 -144356128 - MLT1C LTR MaLR -7 460 89 939 203 0 0 chr10 1233275 1233438 -144355850 - FRAM SINE Alu -3 163 1 228 228 20 119 chr10 1234015 1234116 -144355172 - L2 LINE L2 -188 3084 2994 7616 33 48 3 chr10 1235521 1236584 -144352704 - L1PA4 LINE L1 -1 6154 5077 10604 40 2 0 chr10 1236584 1237942 -144351346 + L1P LINE L1 2453 3813 -2333 189 0 0 0 chr10 1237946 1237967 -144351321 + (TTCC)n Simple_repeat Simple_repeat 1 21 0 2118 124 0 34 chr10 1237971 1238294 -144350994 - AluSx SINE Alu 0 312 1 1575 127 137 13 chr10 1238307 1238621 -144350667 - L1PA16 LINE L1 0 6166 5814 742 238 25 20 chr10 1239080 1239282 -144350006 - MLT1B LTR MaLR 0 390 188 1783 168 7 7 chr10 1239318 1239629 -144349659 - AluJo SINE Alu 0 311 1 232 235 12 49 chr10 1239631 1239712 -144349576 - MLT1B LTR MaLR -207 167 90 1362 242 3 20 chr10 1239716 1240059 -144349229 + MLT1C-int LTR MaLR 1399 1735 0 763 205 6 23 chr10 1240118 1240289 -144348999 - MLT1A2 LTR MaLR -202 172 5 281 324 9 9 chr10 1243308 1243419 -144345869 - MIR SINE MIR -15 247 137 327 283 35 18 chr10 1244102 1244215 -144345073 - L2 LINE L2 0 3313 3199 270 318 83 23 chr10 1244554 1244686 -144344602 - MIR SINE MIR -64 198 59 220 359 58 26 chr10 1246579 1246735 -144342553 + MIR SINE MIR 6 166 -96 1369 224 99 0 chr10 1247271 1247584 -144341704 - L1MA7 LINE L1 0 6291 5948 491 370 34 13 chr10 1248361 1248596 -144340692 - MIR SINE MIR 0 262 23 3995 112 32 2 chr10 1248883 1249474 -144339814 + MER4B LTR ERV1 1 609 -1 242 347 13 73 chr10 1250448 1250598 -144338690 - MIR SINE MIR -115 147 7 721 132 0 16 chr10 1252163 1252284 -144337004 - FLAM_C SINE Alu -24 119 1 597 187 18 26 chr10 1252962 1253188 -144336100 + GA-rich Low_complexity Low_complexity 1 224 0 639 163 22 22 chr10 1253358 1253536 -144335752 + GA-rich Low_complexity Low_complexity 3 180 0 364 298 60 12 chr10 1254983 1255151 -144334137 + MER5B DNA MER1_type 3 178 0 418 228 94 58 chr10 1257214 1257385 -144331903 + MLT1C LTR MaLR 6 182 -285 1259 234 88 38 chr10 1257447 1257922 -144331366 + LTR55 LTR ERV 34 532 -16 461 260 56 5 chr10 1257932 1258176 -144331112 + MLT1C LTR MaLR 192 373 -17 787 270 40 40 chr10 1258886 1259186 -144330102 - AluSq SINE Alu 0 313 14 241 261 26 17 chr10 1259336 1259451 -144329837 + LTR55 LTR ERV 408 523 -25 413 266 59 5 chr10 1259470 1259713 -144329575 + MLT1C LTR MaLR 192 373 -17 1878 142 46 16 chr10 1260417 1260720 -144328568 - AluJb SINE Alu 0 312 1 353 230 74 14 chr10 1261217 1261365 -144327923 + MER76 LTR ERV 15 171 -517 196 222 0 0 chr10 1262236 1262272 -144327016 - L2 LINE L2 -1 3271 3236 222 174 0 0 chr10 1263233 1263279 -144326009 + CT-rich Low_complexity Low_complexity 3 48 0 1035 190 113 12 chr10 1263441 1263688 -144325600 - L1MC1 LINE L1 0 6333 6062 41066 34 23 10 chr10 1263691 1269767 -144319521 + L1PA2 LINE L1 3 6154 -1 3141 170 66 2 chr10 1269780 1270398 -144318890 - L1MC1 LINE L1 -261 6072 5415 244 305 12 12 chr10 1271794 1271876 -144317412 - L2 LINE L2 0 3313 3232 229 292 15 0 chr10 1272227 1272292 -144316996 - L2 LINE L2 -4 3309 3244 259 268 12 49 chr10 1272783 1272865 -144316423 + MIR SINE MIR 40 118 -90 310 310 86 0 chr10 1274291 1274443 -144314845 - MIR SINE MIR -68 140 17 267 93 0 0 chr10 1276118 1276161 -144313127 + (TCC)n Simple_repeat Simple_repeat 3 45 0 22 0 0 0 chr10 1278917 1278939 -144310349 + AT_rich Low_complexity Low_complexity 1 22 0 409 238 74 25 chr10 1281518 1281700 -144307588 - L1P5 LINE L1 -460 5661 5496 1764 165 7 14 chr10 1283061 1283358 -144305930 - AluJo SINE Alu -11 301 7 207 231 0 58 chr10 1283566 1283618 -144305670 + G-rich Low_complexity Low_complexity 1 49 0 3392 253 85 17 chr10 1284915 1286724 -144302564 + L1MD2 LINE L1 4410 6349 -10 224 237 17 0 chr10 1288273 1288332 -144300956 + GA-rich Low_complexity Low_complexity 1 60 0 1844 173 3 22 chr10 1290694 1291007 -144298281 + AluJb SINE Alu 1 307 -5 219 69 0 0 chr10 1291915 1291944 -144297344 + (T)n Simple_repeat Simple_repeat 1 29 0 590 259 11 52 chr10 1292438 1292612 -144296676 + L1MB7 LINE L1 3969 4135 -2011 3160 195 69 42 chr10 1292623 1293744 -144295544 + L1MB7 LINE L1 5032 6184 0 1737 189 3 40 chr10 1294106 1294429 -144294859 + AluJb SINE Alu 2 312 0 182 178 111 0 chr10 1294646 1294691 -144294597 + L3 LINE CR1 1525 1574 -3 220 307 207 27 chr10 1295310 1295460 -144293828 - MIR SINE MIR -84 178 2 231 253 25 13 chr10 1296444 1296523 -144292765 + (TATATG)n Simple_repeat Simple_repeat 4 83 0 202 310 129 9 chr10 1296923 1297039 -144292249 - MER5A DNA MER1_type -3 186 57 206 239 124 71 chr10 1297080 1297193 -144292095 + L2 LINE L2 3154 3272 0 477 250 0 10 chr10 1297193 1297486 -144291802 + GA-rich Low_complexity Low_complexity 1 290 0 222 194 0 0 chr10 1297489 1297556 -144291732 + (TGGA)n Simple_repeat Simple_repeat 3 69 0 279 0 0 0 chr10 1299046 1299077 -144290211 + (TG)n Simple_repeat Simple_repeat 2 32 0 5361 126 6 14 chr10 1305200 1306064 -144283224 + L1PA15 LINE L1 5303 6159 -6 204 226 19 0 chr10 1309093 1309146 -144280142 - MIR SINE MIR -62 146 93 252 314 65 59 chr10 1309352 1309521 -144279767 - MIR SINE MIR -34 228 59 611 125 45 28 chr10 1309914 1310090 -144279198 + (CAGAGA)n Simple_repeat Simple_repeat 1 179 0 5875 97 11 13 chr10 1310666 1312405 -144276883 + HERVH LTR ERV1 2091 3993 -3720 1228 117 0 0 chr10 1312407 1312587 -144276701 + HERVH LTR ERV1 4488 4667 -3046 * 5343 90 52 0 chr10 1312583 1313397 -144275891 + HERVH LTR ERV1 5769 6624 -1089 1423 85 77 20 chr10 1313398 1313645 -144275643 + HERVH LTR ERV1 7453 7713 0 1843 110 34 8 chr10 1313645 1313995 -144275293 + LTR7 LTR ERV1 1 448 -2 290 337 177 23 chr10 1314800 1314975 -144274313 + MIR SINE MIR 59 260 -2 317 231 45 26 chr10 1315275 1315431 -144273857 + (TA)n Simple_repeat Simple_repeat 2 160 0 283 216 14 0 chr10 1316915 1316989 -144272299 - MER53 DNA DNA -7 182 108 199 196 22 0 chr10 1317263 1317309 -144271979 - MIR SINE MIR -125 137 91 252 231 0 0 chr10 1317464 1317516 -144271772 + GA-rich Low_complexity Low_complexity 1 52 0 228 297 187 13 chr10 1319201 1319356 -144269932 + MER5A DNA MER1_type 1 182 -7 200 291 0 0 chr10 1321250 1321305 -144267983 - MIR SINE MIR -4 258 204 1611 119 125 32 chr10 1321503 1321846 -144267442 + MER51B LTR ERV1 2 376 -1 21 57 0 0 chr10 1322702 1322737 -144266551 + GC_rich Low_complexity Low_complexity 1 35 0 25 75 0 0 chr10 1322792 1322845 -144266443 + GC_rich Low_complexity Low_complexity 1 53 0 22 0 0 0 chr10 1322901 1322923 -144266365 + GC_rich Low_complexity Low_complexity 1 22 0 34 55 0 0 chr10 1323240 1323295 -144265993 + GC_rich Low_complexity Low_complexity 1 55 0 1090 185 33 0 chr10 1323941 1324152 -144265136 - MER2 DNA MER2_type 0 345 128 2251 179 69 26 chr10 1324161 1324294 -144264994 + Tigger1 DNA MER2_type 29 155 -2263 2337 97 3 0 chr10 1324294 1324592 -144264696 - AluSx SINE Alu -13 299 1 2251 179 69 26 chr10 1324592 1324962 -144264326 + Tigger1 DNA MER2_type 155 554 -1864 423 348 55 24 chr10 1325014 1325464 -144263824 + L1ME3 LINE L1 5458 5929 -249 206 385 43 17 chr10 1327604 1327721 -144261567 + MIR SINE MIR 82 201 -61 384 224 95 0 chr10 1329072 1329188 -144260100 + L1MA9 LINE L1 6148 6274 -38 7563 186 21 11 chr10 1329608 1331014 -144258274 + L1PB4 LINE L1 3758 5201 -955 195 42 0 0 chr10 1331014 1331038 -144258250 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 7563 186 21 11 chr10 1331038 1332001 -144257287 + L1PB4 LINE L1 5201 6153 -3 1260 193 30 10 chr10 1332463 1332758 -144256530 + L1MA9 LINE L1 4424 4724 -1422 340 136 23 23 chr10 1332761 1332849 -144256439 + (TCTCTG)n Simple_repeat Simple_repeat 1 88 0 258 56 0 0 chr10 1332849 1332885 -144256403 + (CA)n Simple_repeat Simple_repeat 2 37 0 208 225 11 11 chr10 1333051 1333140 -144256148 + (TG)n Simple_repeat Simple_repeat 2 90 0 524 167 24 8 chr10 1335281 1335407 -144253881 + (CA)n Simple_repeat Simple_repeat 1 128 0 490 189 22 22 chr10 1335460 1335640 -144253648 + (CA)n Simple_repeat Simple_repeat 1 180 0 419 235 40 21 chr10 1336512 1336844 -144252444 + (TG)n Simple_repeat Simple_repeat 1 338 0 363 307 28 6 chr10 1336878 1337054 -144252234 + (TG)n Simple_repeat Simple_repeat 1 180 0 305 420 0 0 chr10 1338111 1338285 -144251003 + G-rich Low_complexity Low_complexity 5 178 0 490 205 8 8 chr10 1340573 1340690 -144248598 + MER53 DNA DNA 3 119 -70 2521 225 59 33 chr10 1340773 1341691 -144247597 + L1MA9 LINE L1 5325 6312 0 269 136 0 0 chr10 1341704 1341748 -144247540 + MER53 DNA DNA 146 189 0 813 281 92 82 chr10 1344058 1345455 -144243833 + L1ME2 LINE L1 92 1502 -4894 6762 258 66 52 chr10 1345486 1349065 -144240223 + L1ME2 LINE L1 1849 5451 -764 1374 145 0 14 chr10 1349072 1349324 -144239964 + AluSq SINE Alu 82 330 0 1580 258 58 41 chr10 1349404 1349993 -144239295 + L1ME2 LINE L1 5634 6232 -1 2034 149 30 0 chr10 1351290 1351591 -144237697 - AluJb SINE Alu -2 310 1 602 175 18 0 chr10 1352366 1352480 -144236808 + MLT1B LTR MaLR 1 116 -274 1790 108 14 11 chr10 1352747 1353033 -144236255 - L1MA2 LINE L1 0 6304 6018 198 0 0 0 chr10 1354399 1354421 -144234867 + (TTTTC)n Simple_repeat Simple_repeat 4 25 0 1223 173 154 0 chr10 1354446 1354706 -144234582 - AluJo SINE Alu -2 300 1 220 255 0 0 chr10 1355958 1356005 -144233283 - L2 LINE L2 0 3272 3226 224 328 15 0 chr10 1358671 1358738 -144230550 + L2 LINE L2 3205 3272 0 310 289 78 49 chr10 1361579 1361721 -144227567 + MER103 DNA DNA 21 166 0 463 220 119 0 chr10 1362496 1362605 -144226683 - MER45A DNA AcHobo -7 171 50 1668 100 21 17 chr10 1365105 1365344 -144223944 + AluSq SINE Alu 66 305 -8 26 50 0 0 chr10 1367641 1367681 -144221607 + AT_rich Low_complexity Low_complexity 1 40 0 357 326 8 0 chr10 1368094 1368226 -144221062 - L1ME LINE L1 -400 5721 5589 24 0 0 0 chr10 1371927 1371951 -144217337 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr10 1371996 1372017 -144217271 + AT_rich Low_complexity Low_complexity 1 21 0 322 262 65 9 chr10 1372316 1372423 -144216865 + MIR SINE MIR 88 200 -62 4128 81 41 3 chr10 1373774 1374357 -144214931 + LTR14B LTR ERVK 4 608 0 674 167 35 4 chr10 1374359 1374590 -144214698 + (TGGA)n Simple_repeat Simple_repeat 1 238 0 589 180 30 0 chr10 1374611 1374778 -144214510 + (TGGA)n Simple_repeat Simple_repeat 4 175 0 513 199 19 0 chr10 1374868 1375024 -144214264 + (TGGA)n Simple_repeat Simple_repeat 4 162 0 31 0 0 0 chr10 1375234 1375265 -144214023 + AT_rich Low_complexity Low_complexity 1 31 0 225 369 92 0 chr10 1375467 1375597 -144213691 + MIR SINE MIR 46 187 -75 209 275 12 25 chr10 1375714 1375794 -144213494 + (CATATA)n Simple_repeat Simple_repeat 6 84 0 275 280 105 83 chr10 1376953 1377177 -144212111 - MIR SINE MIR -13 249 21 1808 84 0 8 chr10 1378641 1378879 -144210409 - AluSq SINE Alu -12 301 66 537 263 25 0 chr10 1381057 1381175 -144208113 - L2 LINE L2 0 3313 3193 184 250 0 21 chr10 1384941 1384989 -144204299 + L2 LINE L2 3267 3313 0 4467 197 29 24 chr10 1386625 1387514 -144201774 + L1MD2 LINE L1 4822 5704 -655 2049 116 0 26 chr10 1387514 1387817 -144201471 - AluSx SINE Alu -14 298 4 4467 197 29 24 chr10 1387817 1387840 -144201448 + L1MD2 LINE L1 5704 5725 -634 2241 78 7 3 chr10 1387840 1388133 -144201155 - AluY SINE Alu -17 294 1 4467 197 29 24 chr10 1388133 1388376 -144200912 + L1MD2 LINE L1 5725 6151 -208 264 137 0 0 chr10 1388376 1388427 -144200861 + (CA)n Simple_repeat Simple_repeat 1 51 0 293 226 24 24 chr10 1388431 1388515 -144200773 + L1MD2 LINE L1 6135 6218 -141 581 263 58 0 chr10 1388597 1388768 -144200520 + L1MD2 LINE L1 6176 6356 -3 189 203 14 27 chr10 1389376 1389450 -144199838 + CT-rich Low_complexity Low_complexity 1 73 0 1247 238 55 43 chr10 1389450 1390110 -144199178 + L1MDa LINE L1 1963 2730 -3893 1138 118 0 18 chr10 1390129 1390298 -144198990 + AluSg/x SINE Alu 129 294 -18 3278 227 45 52 chr10 1390301 1391514 -144197774 + L1MDa LINE L1 2720 3923 -2617 243 0 0 0 chr10 1391729 1391756 -144197532 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 2987 86 17 2 chr10 1393935 1394539 -144194749 + PABL_A LTR ERV1 1 660 0 221 194 0 16 chr10 1395652 1395714 -144193574 + (TG)n Simple_repeat Simple_repeat 2 62 0 284 202 0 48 chr10 1396780 1396864 -144192424 - L1MC4 LINE L1 -1339 6703 6624 187 273 57 45 chr10 1399804 1399892 -144189396 + MIR SINE MIR 23 111 -151 205 228 38 63 chr10 1401057 1401136 -144188152 - MIR SINE MIR -38 224 148 225 235 43 61 chr10 1401279 1401394 -144187894 - MIR SINE MIR -54 208 96 1042 224 103 24 chr10 1451682 1452012 -144137276 + MLT1A2 LTR MaLR 19 374 0 894 144 7 0 chr10 1452274 1452413 -144136875 + L1P LINE L1 4882 5021 -1125 269 270 95 40 chr10 1453078 1453204 -144136084 - MIR SINE MIR -71 191 59 10548 37 2 0 chr10 1453833 1455114 -144134174 - L1P LINE L1 -2361 3785 2503 194 326 90 35 chr10 1455214 1455314 -144133974 + MIR SINE MIR 107 219 -43 2254 118 0 0 chr10 1455314 1455619 -144133669 + AluSx SINE Alu 1 305 -7 194 326 90 35 chr10 1455619 1455662 -144133626 + MIR SINE MIR 219 258 -4 1062 203 50 5 chr10 1456364 1456586 -144132702 + L1PA15-16 LINE L1 1453 1684 -5165 254 176 132 0 chr10 1456588 1456656 -144132632 + polypurine Low_complexity Low_complexity 3 79 0 4423 134 31 15 chr10 1456656 1457437 -144131851 + L1PA15-16 LINE L1 1617 2409 -4440 2646 221 20 11 chr10 1457537 1458270 -144131018 + L1 LINE L1 3506 4245 -2604 31 0 0 0 chr10 1459982 1460013 -144129275 + AT_rich Low_complexity Low_complexity 1 31 0 205 296 0 0 chr10 1460140 1460184 -144129104 - L2 LINE L2 -8 3305 3262 197 211 96 19 chr10 1460148 1460200 -144129088 - MIR SINE MIR -10 252 197 * 257 189 176 0 chr10 1460371 1460445 -144128843 + MLT1J LTR MaLR 419 505 -6 447 137 0 27 chr10 1461048 1461121 -144128167 - 5S rRNA rRNA -20 101 31 384 265 17 87 chr10 1461628 1461858 -144127430 - L1ME4a LINE L1 -12 6109 5896 987 176 18 0 chr10 1463001 1463166 -144126122 + MER68 LTR ERV1 395 562 0 461 323 5 5 chr10 1463275 1463473 -144125815 + L1M3 LINE L1 2703 2900 -3246 277 167 0 0 chr10 1463476 1463518 -144125770 - Tigger5 DNA MER2_type 0 2323 2282 * 309 237 17 0 chr10 1463516 1463575 -144125713 + Tigger5 DNA MER2_type 2259 2318 -5 265 182 227 30 chr10 1463575 1463641 -144125647 - Tigger5 DNA MER2_type -2243 80 2 344 178 0 0 chr10 1463643 1463716 -144125572 + L1M3 LINE L1 2904 2976 -3170 226 211 0 39 chr10 1463718 1463770 -144125518 + L1M4 LINE L1 435 484 -6091 443 250 91 40 chr10 1463800 1463976 -144125312 + L1M3d LINE L1 64 248 -6294 1333 222 64 12 chr10 1464141 1464479 -144124809 + L1M3 LINE L1 5231 5580 -600 22 0 0 0 chr10 1466011 1466033 -144123255 + AT_rich Low_complexity Low_complexity 1 22 0 480 331 6 0 chr10 1466310 1466488 -144122800 + (CA)n Simple_repeat Simple_repeat 2 180 0 180 77 0 0 chr10 1467099 1467125 -144122163 + (CCA)n Simple_repeat Simple_repeat 3 28 0 282 238 16 0 chr10 1468469 1468532 -144120756 + L1M3d LINE L1 238 301 -6343 2430 92 0 0 chr10 1468699 1469004 -144120284 - AluSx SINE Alu -7 305 1 3947 144 58 5 chr10 1469257 1469909 -144119379 + L1PA16 LINE L1 5470 6156 -10 534 201 10 10 chr10 1470674 1470969 -144118319 + (TG)n Simple_repeat Simple_repeat 1 295 0 189 147 0 0 chr10 1472115 1472149 -144117139 + (TC)n Simple_repeat Simple_repeat 1 34 0 213 193 18 18 chr10 1472708 1472765 -144116523 + (TA)n Simple_repeat Simple_repeat 2 58 0 359 330 54 15 chr10 1474098 1474301 -144114987 + L1M3d LINE L1 652 862 -5772 358 237 26 105 chr10 1474548 1474700 -144114588 + L1M4 LINE L1 2088 2227 -4598 219 36 0 0 chr10 1474723 1474751 -144114537 + (TG)n Simple_repeat Simple_repeat 2 29 0 * 342 0 0 0 chr10 1474750 1474788 -144114500 + (TA)n Simple_repeat Simple_repeat 1 38 0 337 291 63 63 chr10 1475050 1475256 -144114032 + L1M3d LINE L1 881 1086 -5479 1857 231 160 45 chr10 1475384 1476184 -144113104 + L1M4c LINE L1 542 1794 -4519 3620 244 33 11 chr10 1476284 1477331 -144111957 + L1P LINE L1 2639 3708 -2438 8574 78 13 0 chr10 1477431 1478567 -144110721 - L1P LINE L1 -4660 1486 336 1754 176 65 40 chr10 1478667 1479037 -144110251 + L1MC1 LINE L1 5950 6328 -5 630 152 27 0 chr10 1479042 1479154 -144110134 + L1MB7 LINE L1 6051 6165 -19 2935 150 44 22 chr10 1479174 1479501 -144109787 - L1MD2 LINE L1 -423 5936 5591 1691 160 35 11 chr10 1479501 1479788 -144109500 - AluJo SINE Alu -18 294 1 2935 150 44 22 chr10 1479788 1480008 -144109280 - L1MD2 LINE L1 -768 5591 5377 518 224 33 33 chr10 1480018 1480170 -144109118 + L1MC5 LINE L1 7314 7465 -496 5808 167 40 3 chr10 1480300 1481432 -144107856 - L1PBa LINE L1 -4453 2410 1093 2800 184 71 17 chr10 1481433 1482025 -144107263 - L1PBa LINE L1 -5815 1048 425 21 36 0 0 chr10 1482300 1482328 -144106960 + AT_rich Low_complexity Low_complexity 1 28 0 5839 163 38 10 chr10 1483820 1485046 -144104242 + L1PA12 LINE L1 225 2004 -5577 999 159 12 0 chr10 1485044 1485207 -144104081 + L1PA13 LINE L1 339 503 -6284 * 21 36 0 0 chr10 1485467 1485495 -144103793 + AT_rich Low_complexity Low_complexity 1 28 0 210 315 0 14 chr10 1485768 1485841 -144103447 + (CATATA)n Simple_repeat Simple_repeat 5 76 0 247 191 0 0 chr10 1486290 1486332 -144102956 + MIR SINE MIR 111 152 -56 1290 139 43 9 chr10 1487143 1487373 -144101915 + MLT1B LTR MaLR 151 388 -2 22 56 0 0 chr10 1487616 1487652 -144101636 + AT_rich Low_complexity Low_complexity 1 36 0 2324 88 16 0 chr10 1490168 1490473 -144098815 + AluSg SINE Alu 1 310 0 4395 183 44 35 chr10 1491859 1492903 -144096385 - L1 LINE L1 -1279 5049 3997 1477 234 61 16 chr10 1493009 1493454 -144095834 - L1ME2 LINE L1 -142 6022 5558 2954 137 41 2 chr10 1493456 1493939 -144095349 - L1PA16 LINE L1 -3 6163 5662 2195 124 0 3 chr10 1493958 1494264 -144095024 - AluSx SINE Alu -7 305 1 906 287 123 21 chr10 1494265 1495150 -144094138 - L1ME2 LINE L1 -1890 4256 3261 5318 184 23 32 chr10 1495268 1496786 -144092502 - L1 LINE L1 -4296 2032 3 186 224 0 0 chr10 1497133 1497182 -144092106 + (TG)n Simple_repeat Simple_repeat 2 50 0 356 327 92 0 chr10 1497356 1497509 -144091779 - MIR SINE MIR -66 196 30 258 241 74 37 chr10 1497578 1497686 -144091602 - L1MA10 LINE L1 0 6334 6223 936 187 7 1 chr10 1497735 1497920 -144091368 - L1ME1 LINE L1 -290 5882 5693 4680 164 38 14 chr10 1497921 1498952 -144090336 + L1MB2 LINE L1 5105 6164 -7 247 169 0 123 chr10 1498957 1499022 -144090266 + L1ME3A LINE L1 5962 6018 -152 418 93 0 0 chr10 1499596 1499650 -144089638 - Alu SINE Alu -250 60 7 463 186 44 18 chr10 1500111 1500224 -144089064 + MER4C LTR ERV1 4 119 -346 226 224 0 0 chr10 1500289 1500338 -144088950 + MER4A LTR ERV1 136 184 -480 399 217 59 129 chr10 1500370 1500758 -144088530 + MER4A LTR ERV1 189 656 -43 4763 187 5 32 chr10 1501378 1502572 -144086716 + L1P4 LINE L1 4316 5472 -694 442 319 44 28 chr10 1502567 1503180 -144086108 + L1ME LINE L1 4934 5557 -605 * 268 206 124 84 chr10 1504653 1504795 -144084493 - MLT1L LTR MaLR -304 207 49 1073 229 47 0 chr10 1504795 1505009 -144084279 - MER58A DNA MER1_type 0 224 1 268 206 124 84 chr10 1505009 1505058 -144084230 - MLT1L LTR MaLR -462 49 3 1902 76 4 0 chr10 1509397 1509647 -144079641 - L1PA8 LINE L1 -3 6169 5919 8273 163 11 12 chr10 1509747 1510761 -144078527 - L1P LINE L1 -1953 4193 3179 2352 93 6 6 chr10 1510761 1511072 -144078216 - AluY SINE Alu 0 311 1 8273 163 11 12 chr10 1511072 1511538 -144077750 - L1P LINE L1 -2967 3179 2714 1764 117 0 0 chr10 1511537 1511776 -144077512 + L1P LINE L1 1 239 -5907 * 312 250 77 0 chr10 1511877 1511981 -144077307 - LTR43 LTR ERV1 -479 123 12 475 329 103 16 chr10 1512071 1512518 -144076770 - L1ME1 LINE L1 -4 6162 5677 849 245 24 21 chr10 1512860 1513223 -144076065 - L1ME1 LINE L1 -782 5364 5155 251 106 0 21 chr10 1513622 1513669 -144075619 + Alu SINE Alu 263 308 0 5307 141 12 15 chr10 1513669 1514538 -144074750 + L1PA15 LINE L1 5297 6165 0 905 240 115 13 chr10 1514549 1514861 -144074427 - L1ME1 LINE L1 -3600 2546 2203 3392 240 80 21 chr10 1514972 1516197 -144073091 - L1 LINE L1 -2550 3596 2300 1801 163 38 20 chr10 1516198 1516542 -144072746 + MER65A LTR ERV1 1 350 -95 3249 123 7 2 chr10 1516544 1517007 -144072281 + HSMAR1 DNA Mariner 27 491 -796 265 345 18 9 chr10 1517107 1517220 -144072068 - L2 LINE L2 -20 3293 3180 238 313 56 56 chr10 1518286 1518430 -144070858 - MIR SINE MIR -72 190 47 252 257 68 0 chr10 1518788 1518862 -144070426 + L1MA9 LINE L1 6057 6135 -177 786 207 112 90 chr10 1524266 1524623 -144064665 - MLT1A1 LTR MaLR 0 365 1 7176 220 113 9 chr10 1524938 1527028 -144062260 - L1PA13 LINE L1 -3979 2818 499 760 100 0 0 chr10 1527028 1527128 -144062160 + THE1C LTR MaLR 1 100 -275 7205 176 31 11 chr10 1527603 1529825 -144059463 - L1PA14 LINE L1 0 6161 3898 225 0 0 0 chr10 1530665 1530690 -144058598 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 561 167 0 0 chr10 1531512 1531614 -144057674 + (TCCA)n Simple_repeat Simple_repeat 4 105 0 8605 204 61 16 chr10 1531720 1533238 -144056050 + L1M1 LINE L1 3344 4793 -2772 659 232 8 0 chr10 1533238 1533363 -144055925 + FLAM_A SINE Alu 2 127 -6 8605 204 61 16 chr10 1533363 1534665 -144054623 + L1M1 LINE L1 4793 6418 -1147 792 77 19 0 chr10 1534661 1534765 -144054523 + L1PA12 LINE L1 1 106 -7475 * 279 29 0 0 chr10 1534765 1534800 -144054488 - MADE1 DNA Mariner -34 46 12 246 215 115 110 chr10 1535258 1535449 -144053839 - MLT1J LTR MaLR -112 399 208 5617 205 137 49 chr10 1535455 1537320 -144051968 - L1MCa LINE L1 -4392 2034 6 382 216 11 0 chr10 1537298 1537386 -144051902 - L1M LINE L1 -766 5688 5600 * 2410 150 50 43 chr10 1537486 1538165 -144051123 - L1M4 LINE L1 -401 5777 5091 977 226 35 42 chr10 1538445 1538732 -144050556 - L1ME1 LINE L1 -18 6148 5864 2096 148 77 0 chr10 1538738 1539076 -144050212 + THE1B LTR MaLR 1 364 0 4990 90 3 1 chr10 1539076 1539740 -144049548 + THE1B-int LTR MaLR 1 665 -915 362 73 0 0 chr10 1539721 1539776 -144049512 + THE1B-int LTR MaLR 1521 1575 -5 * 247 292 109 58 chr10 1539894 1540031 -144049257 + L2 LINE L2 3128 3271 -1 191 311 49 0 chr10 1541243 1541304 -144047984 + L2 LINE L2 3201 3264 -8 299 380 0 0 chr10 1542347 1542476 -144046812 + (TGAG)n Simple_repeat Simple_repeat 4 132 0 1574 170 71 3 chr10 1544649 1544972 -144044316 - MLT1B LTR MaLR -38 352 8 21 36 0 0 chr10 1545445 1545473 -144043815 + AT_rich Low_complexity Low_complexity 1 28 0 304 271 157 52 chr10 1546785 1546995 -144042293 - L1M2 LINE L1 -5598 1251 1020 12610 34 3 2 chr10 1548441 1550648 -144038640 + L1PA4 LINE L1 3880 6090 -65 641 136 14 27 chr10 1550761 1550908 -144038380 + (TCCA)n Simple_repeat Simple_repeat 2 146 0 765 157 11 11 chr10 1550950 1551128 -144038160 + (TCCA)n Simple_repeat Simple_repeat 3 180 0 295 252 0 103 chr10 1551765 1551872 -144037416 + MIR SINE MIR 89 184 -78 407 329 110 0 chr10 1551982 1552128 -144037160 - MIR SINE MIR -57 205 44 398 295 53 27 chr10 1552153 1552393 -144036895 + MIR SINE MIR 12 256 -6 337 301 39 0 chr10 1552858 1552961 -144036327 + MIR SINE MIR 88 194 -68 1154 163 15 0 chr10 1553165 1553368 -144035920 - L1PA15 LINE L1 -7 6158 5953 1686 162 14 0 chr10 1553469 1553753 -144035535 - MSTA LTR MaLR -140 288 1 994 162 81 0 chr10 1553916 1554113 -144035175 + AluJb SINE Alu 55 267 -45 318 286 109 8 chr10 1555846 1555965 -144033323 - MER5A DNA MER1_type -52 137 7 2070 126 0 0 chr10 1556174 1556475 -144032813 + AluSg SINE Alu 1 301 -9 5013 181 15 30 chr10 1557986 1558010 -144031278 - L1MC1 LINE L1 -6 6327 6304 3301 110 31 90 chr10 1558010 1558157 -144031131 - MER4A LTR ERV1 0 600 446 2201 75 0 0 chr10 1558157 1558462 -144030826 - AluY SINE Alu 0 307 3 3301 110 31 90 chr10 1558462 1558948 -144030340 - MER4A LTR ERV1 -154 446 3 5013 181 15 30 chr10 1558948 1559948 -144029340 - L1MC1 LINE L1 -29 6304 5319 892 264 70 98 chr10 1561175 1561717 -144027571 + MER77 LTR ERV1 79 605 0 419 210 10 0 chr10 1562253 1562353 -144026935 + CT-rich Low_complexity Low_complexity 1 101 0 270 284 0 34 chr10 1563068 1563156 -144026132 - L2 LINE L2 -3 3269 3185 209 57 29 0 chr10 1564774 1564809 -144024479 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1174 22 0 0 chr10 1566165 1566299 -144022989 + L1PA3 LINE L1 6022 6155 0 311 233 89 22 chr10 1567158 1567248 -144022040 - MIR SINE MIR -131 131 36 250 246 72 14 chr10 1567310 1567379 -144021909 - L2 LINE L2 -16 3297 3225 279 319 11 33 chr10 1568411 1568502 -144020786 + L2 LINE L2 3221 3309 -4 849 254 90 3 chr10 1568634 1568922 -144020366 + MER33 DNA MER1_type 9 321 -3 189 0 0 0 chr10 1570857 1570878 -144018410 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 267 224 149 0 chr10 1571960 1572027 -144017261 + Charlie8 DNA MER1_type 118 194 -2223 465 110 0 0 chr10 1572538 1572611 -144016677 + (CA)n Simple_repeat Simple_repeat 2 74 0 202 397 127 15 chr10 1573271 1573545 -144015743 - L2 LINE L2 0 3272 2937 1642 194 0 19 chr10 1573545 1573860 -144015428 - AluJb SINE Alu -3 309 1 202 397 127 15 chr10 1573860 1573988 -144015300 - L2 LINE L2 -335 2937 2825 7242 114 67 8 chr10 1574943 1576105 -144013183 - Tigger3b DNA MER2_type 0 1231 1 617 258 30 6 chr10 1576785 1576952 -144012336 + MER3 DNA MER1_type 35 205 -4 304 200 55 0 chr10 1578700 1578810 -144010478 + (CTGTG)n Simple_repeat Simple_repeat 4 119 0 246 261 15 0 chr10 1580136 1580201 -144009087 + L2 LINE L2 3247 3312 -1 296 320 137 23 chr10 1581347 1581522 -144007766 + MIR3 SINE MIR 6 200 -8 21 57 0 0 chr10 1582216 1582251 -144007037 + AT_rich Low_complexity Low_complexity 1 35 0 198 71 0 0 chr10 1583311 1583339 -144005949 + (GA)n Simple_repeat Simple_repeat 1 28 0 1976 210 167 4 chr10 1583586 1584144 -144005144 + L1MB3 LINE L1 5534 6182 -1 522 324 0 0 chr10 1586115 1586534 -144002754 + (TATG)n Simple_repeat Simple_repeat 1 419 0 505 302 0 0 chr10 1586551 1586824 -144002464 + (TAGG)n Simple_repeat Simple_repeat 1 273 0 1818 120 31 51 chr10 1587720 1587888 -144001400 + L1PA13 LINE L1 5780 5950 -213 1988 134 10 0 chr10 1587888 1588180 -144001108 + AluSq SINE Alu 1 295 -18 1818 120 31 51 chr10 1588180 1588361 -144000927 + L1PA13 LINE L1 5950 6122 -41 261 189 0 38 chr10 1588376 1588429 -144000859 + L1PA13 LINE L1 6072 6122 -41 261 189 0 38 chr10 1588410 1588463 -144000825 + L1PA13 LINE L1 6072 6122 -41 227 226 0 38 chr10 1588478 1588531 -144000757 + L1PA13 LINE L1 6072 6122 -41 243 208 0 38 chr10 1588580 1588633 -144000655 + L1PA13 LINE L1 6072 6122 -41 243 208 0 38 chr10 1588614 1588667 -144000621 + L1PA13 LINE L1 6072 6122 -41 * 277 219 35 31 chr10 1588648 1588735 -144000553 + L1PA13 LINE L1 6072 6141 -22 243 208 0 38 chr10 1588750 1588803 -144000485 + L1PA13 LINE L1 6072 6122 -41 * 277 217 43 29 chr10 1588784 1588853 -144000435 + L1PA13 LINE L1 6072 6141 -22 241 233 0 33 chr10 1588845 1588905 -144000383 + L1PA13 LINE L1 6065 6122 -41 * 227 226 0 38 chr10 1589056 1589109 -144000179 + L1PA13 LINE L1 6072 6122 -41 * 277 217 43 29 chr10 1589090 1589159 -144000129 + L1PA13 LINE L1 6072 6141 -22 259 217 0 33 chr10 1589151 1589211 -144000077 + L1PA13 LINE L1 6065 6122 -41 * 236 211 0 39 chr10 1589192 1589244 -144000044 + L1PA13 LINE L1 6072 6121 -42 * 234 226 0 38 chr10 1589226 1589279 -144000009 + L1PA13 LINE L1 6072 6122 -41 * 246 208 0 38 chr10 1589260 1589313 -143999975 + L1PA13 LINE L1 6072 6122 -41 425 125 62 25 chr10 1589337 1589417 -143999871 + L1PA13 LINE L1 6081 6163 0 21 0 0 0 chr10 1589948 1589969 -143999319 + AT_rich Low_complexity Low_complexity 1 21 0 2110 120 0 10 chr10 1590158 1590450 -143998838 + AluSx SINE Alu 1 289 -23 659 240 0 6 chr10 1590941 1591293 -143997995 + (TG)n Simple_repeat Simple_repeat 1 349 0 586 244 66 77 chr10 1592334 1592698 -143996590 + MLT1A2 LTR MaLR 2 361 -13 245 258 61 15 chr10 1593590 1593656 -143995632 + MIR SINE MIR 55 123 -85 220 265 243 15 chr10 1593901 1594037 -143995251 + MIR SINE MIR 15 181 -81 2111 130 3 13 chr10 1594108 1594416 -143994872 + AluSx SINE Alu 1 305 -7 1711 185 7 7 chr10 1595595 1596069 -143993219 - AluJo SINE Alu 0 312 7 1102 77 0 0 chr10 1596824 1596954 -143992334 + AluYb8 SINE Alu 1 130 -188 21223 114 12 17 chr10 1596964 1600359 -143988929 + L1P LINE L1 11 3388 -2758 414 0 0 0 chr10 1601640 1601686 -143987602 + (CA)n Simple_repeat Simple_repeat 1 46 0 285 271 171 0 chr10 1601933 1602062 -143987226 - MIR SINE MIR -90 172 22 1996 196 217 10 chr10 1602394 1603002 -143986286 + L1MC1 LINE L1 5600 6333 0 1487 180 23 23 chr10 1603111 1603411 -143985877 + L1PA15 LINE L1 5865 6164 -1 2264 106 3 3 chr10 1605367 1605668 -143983620 + AluSq SINE Alu 1 301 -12 225 94 0 0 chr10 1605741 1605773 -143983515 + (TC)n Simple_repeat Simple_repeat 1 32 0 2167 85 0 41 chr10 1606387 1606682 -143982606 + AluSg SINE Alu 12 294 -16 943 151 17 6 chr10 1607812 1607991 -143981297 - MSTB LTR MaLR -245 181 1 345 273 0 0 chr10 1608300 1608428 -143980860 + (CA)n Simple_repeat Simple_repeat 2 129 0 528 258 0 0 chr10 1608451 1608629 -143980659 + (CA)n Simple_repeat Simple_repeat 1 178 0 471 50 25 12 chr10 1610215 1610295 -143978993 + (TCTA)n Simple_repeat Simple_repeat 2 82 0 182 275 0 0 chr10 1610302 1610342 -143978946 + L2 LINE L2 3255 3294 -19 300 172 0 0 chr10 1610364 1610422 -143978866 + (TGGA)n Simple_repeat Simple_repeat 4 61 0 1026 93 7 0 chr10 1612323 1612463 -143976825 - MER4E LTR ERV1 0 766 626 211 306 121 45 chr10 1613242 1613441 -143975847 - L2 LINE L2 -42 3271 3058 1835 112 0 79 chr10 1614750 1615080 -143974208 - AluSx SINE Alu 0 306 1 610 326 96 48 chr10 1615086 1615813 -143973475 - L2 LINE L2 -1904 1410 649 209 173 333 0 chr10 1616108 1616189 -143973099 + MER5A DNA MER1_type 61 168 -21 219 69 0 0 chr10 1619543 1619572 -143969716 + (TAA)n Simple_repeat Simple_repeat 2 30 0 2812 73 0 19 chr10 1619655 1620024 -143969264 + L1PA7 LINE L1 5792 6153 -1 398 276 88 0 chr10 1620103 1620273 -143969015 - MER5A DNA MER1_type 0 189 5 518 206 38 19 chr10 1620435 1620595 -143968693 - L1M4 LINE L1 -945 5201 5039 253 374 12 23 chr10 1620922 1621093 -143968195 - L2 LINE L2 -529 2785 2617 383 302 94 50 chr10 1621170 1621329 -143967959 + L2 LINE L2 3104 3269 -3 560 294 109 25 chr10 1621482 1621598 -143967690 + L2 LINE L2 1809 1914 -1400 189 0 0 0 chr10 1621598 1621619 -143967669 + (TC)n Simple_repeat Simple_repeat 1 21 0 560 294 109 25 chr10 1621619 1621777 -143967511 + L2 LINE L2 1914 2106 -1208 662 207 25 0 chr10 1621778 1621899 -143967389 - FRAM SINE Alu -21 155 32 525 276 23 6 chr10 1621918 1622092 -143967196 + MER5B DNA MER1_type 1 177 -1 1504 280 149 31 chr10 1622093 1623113 -143966175 + L2 LINE L2 2110 3309 -4 183 42 0 0 chr10 1623600 1623624 -143965664 + (CAA)n Simple_repeat Simple_repeat 2 25 0 285 229 0 0 chr10 1623969 1624030 -143965258 - LTR16A LTR ERVL -9 441 381 2590 134 3 3 chr10 1624031 1624405 -143964883 - THE1C LTR MaLR 0 375 2 1120 80 11 11 chr10 1624407 1624582 -143964706 - THE1C-int LTR MaLR -1 1579 1405 * 6422 115 53 8 chr10 1624580 1625580 -143963708 - THE1C-int LTR MaLR -535 1045 1 373 143 182 0 chr10 1625591 1625668 -143963620 - THE1C LTR MaLR -149 226 136 441 229 34 34 chr10 1625668 1625847 -143963441 + (CATGT)n Simple_repeat Simple_repeat 1 179 0 29537 97 8 16 chr10 1625954 1630419 -143958869 - L1P LINE L1 -1356 4790 358 1684 57 9 26 chr10 1630533 1630761 -143958527 + L1PA8 LINE L1 5947 6170 -2 372 373 158 6 chr10 1630790 1631112 -143958176 + L2 LINE L2 2452 2822 -492 235 264 108 48 chr10 1631138 1631305 -143957983 + L2 LINE L2 3122 3298 -15 214 217 22 0 chr10 1631357 1631403 -143957885 + L2 LINE L2 3220 3266 -6 2740 236 69 42 chr10 1632365 1633373 -143955915 + L1 LINE L1 2873 3908 -2238 22288 45 0 0 chr10 1633373 1636981 -143952307 + L1PA4 LINE L1 2585 6153 -2 245 269 20 12 chr10 1636989 1637114 -143952174 + L1 LINE L1 4247 4375 -1771 315 229 123 16 chr10 1637120 1637242 -143952046 + LTR33 LTR ERVL 2 136 -385 23 0 0 0 chr10 1638934 1638957 -143950331 + AT_rich Low_complexity Low_complexity 1 23 0 369 305 72 18 chr10 1639456 1639679 -143949609 - MARNA DNA Mariner -166 420 186 963 184 134 20 chr10 1640492 1640693 -143948595 + MER58A DNA MER1_type 1 224 0 292 336 116 14 chr10 1641097 1641243 -143948045 - MIR3 SINE MIR -11 197 37 411 280 100 10 chr10 1641285 1641485 -143947803 - LTR33 LTR ERVL 0 521 304 183 286 54 0 chr10 1641739 1641795 -143947493 + L2 LINE L2 3255 3313 0 1535 210 12 18 chr10 1641987 1642325 -143946963 - MLT1E3 LTR MaLR 0 624 289 670 150 19 3 chr10 1642353 1642525 -143946763 - MLT1E1 LTR MaLR -424 230 5 21 0 0 0 chr10 1642623 1642644 -143946644 + AT_rich Low_complexity Low_complexity 1 21 0 229 67 0 167 chr10 1642919 1642979 -143946309 + MER50 LTR ERV1 658 707 -27 1837 155 16 13 chr10 1643004 1643314 -143945974 - AluJb SINE Alu -1 311 1 347 202 11 0 chr10 1645836 1645925 -143943363 + GA-rich Low_complexity Low_complexity 1 90 0 2446 133 14 0 chr10 1646937 1647305 -143941983 + MER83C LTR ERV1 1 373 0 4568 214 52 24 chr10 1649709 1650128 -143939160 + L1 LINE L1 3950 4355 -1791 2352 84 0 14 chr10 1650128 1650425 -143938863 + AluY SINE Alu 1 293 -18 4568 214 52 24 chr10 1650425 1651280 -143938008 + L1 LINE L1 4355 5261 -885 214 346 53 30 chr10 1651541 1651674 -143937614 + L3 LINE CR1 812 947 -630 1676 138 7 22 chr10 1652497 1652773 -143936515 - AluSx SINE Alu -6 306 35 671 283 28 31 chr10 1653525 1653898 -143935390 + L1MA9 LINE L1 5935 6306 -6 240 86 0 0 chr10 1654491 1654526 -143934762 + (CA)n Simple_repeat Simple_repeat 1 35 0 2385 100 0 3 chr10 1656845 1657155 -143932133 + AluSg SINE Alu 1 309 -1 4421 165 14 7 chr10 1660149 1661034 -143928254 + L1PB4 LINE L1 5183 6072 -84 524 233 15 0 chr10 1661136 1661269 -143928019 + L1PB4 LINE L1 6022 6156 0 209 326 45 0 chr10 1662127 1662216 -143927072 + MIR SINE MIR 117 209 -53 1754 160 13 26 chr10 1662574 1662880 -143926408 - AluJb SINE Alu -10 302 1 2252 124 0 3 chr10 1663214 1663520 -143925768 + AluSx SINE Alu 1 305 -7 542 239 6 0 chr10 1665453 1665629 -143923659 + (CA)n Simple_repeat Simple_repeat 2 178 0 542 254 3 3 chr10 1665672 1666023 -143923265 + (CA)n Simple_repeat Simple_repeat 1 351 0 202 222 0 22 chr10 1666681 1666726 -143922562 + L2 LINE L2 3261 3304 -9 345 269 148 9 chr10 1668045 1668153 -143921135 - MER5A DNA MER1_type -1 188 66 251 229 0 29 chr10 1668434 1668504 -143920784 + CT-rich Low_complexity Low_complexity 1 68 0 319 266 132 82 chr10 1668953 1669430 -143919858 - L1MEc LINE L1 -4657 1906 1406 222 272 0 26 chr10 1669588 1669777 -143919511 + CT-rich Low_complexity Low_complexity 1 184 0 210 200 32 42 chr10 1669790 1669885 -143919403 + (TCTCG)n Simple_repeat Simple_repeat 2 95 0 345 316 37 0 chr10 1670994 1671130 -143918158 + (CATG)n Simple_repeat Simple_repeat 3 143 0 315 122 0 0 chr10 1673696 1673745 -143915543 + (GA)n Simple_repeat Simple_repeat 1 49 0 252 0 0 0 chr10 1674196 1674224 -143915064 + (TG)n Simple_repeat Simple_repeat 1 28 0 368 230 0 6 chr10 1675015 1675193 -143914095 + CT-rich Low_complexity Low_complexity 2 178 0 323 306 183 31 chr10 1675233 1675681 -143913607 - L1MEc LINE L1 -5063 1321 806 213 146 0 0 chr10 1675725 1675773 -143913515 + (TC)n Simple_repeat Simple_repeat 1 48 0 2495 94 173 5 chr10 1677660 1678076 -143911212 + LTR19A LTR ERV1 1 486 0 873 254 139 68 chr10 1678877 1679439 -143909849 + MLT1E2 LTR MaLR 20 621 -5 26 30 0 0 chr10 1679916 1679949 -143909339 + AT_rich Low_complexity Low_complexity 1 33 0 2381 209 51 41 chr10 1679965 1680461 -143908827 - L1MC3 LINE L1 -1 7784 7294 2224 121 7 0 chr10 1680461 1680758 -143908530 - AluSx SINE Alu -13 299 1 2381 209 51 41 chr10 1680758 1680934 -143908354 - L1MC3 LINE L1 -491 7294 5648 283 329 0 0 chr10 1680936 1681094 -143908194 + (TG)n Simple_repeat Simple_repeat 2 159 0 861 231 16 0 chr10 1681109 1681308 -143907980 - L1MC/D LINE L1 -582 5572 5493 261 315 76 51 chr10 1681428 1681625 -143907663 - MIR SINE MIR -37 225 24 644 206 6 17 chr10 1682796 1682976 -143906312 + (TATG)n Simple_repeat Simple_repeat 2 179 0 184 338 73 50 chr10 1683844 1684063 -143905225 - MIR SINE MIR -14 248 25 212 310 126 0 chr10 1687335 1687422 -143901866 - L2 LINE L2 -3 3310 3213 187 266 9 9 chr10 1691318 1691427 -143897861 + (TG)n Simple_repeat Simple_repeat 1 109 0 418 313 50 0 chr10 1691427 1691587 -143897701 + (CATG)n Simple_repeat Simple_repeat 1 168 0 205 264 28 7 chr10 1691604 1691748 -143897540 + (TG)n Simple_repeat Simple_repeat 2 148 0 193 311 0 14 chr10 1691883 1691957 -143897331 - L3b LINE CR1 -210 1373 1301 1603 91 45 0 chr10 1692257 1692477 -143896811 - MER30 DNA MER1_type 0 230 1 1921 166 0 3 chr10 1694153 1694454 -143894834 - AluSx SINE Alu -12 300 1 231 269 83 9 chr10 1698481 1698589 -143890699 + L1ME4a LINE L1 6006 6121 0 225 301 88 37 chr10 1698791 1699007 -143890281 - L2 LINE L2 -215 3098 2872 * 310 288 64 0 chr10 1698983 1699108 -143890180 - L2 LINE L2 -1579 1735 1603 516 183 39 0 chr10 1699562 1699666 -143889622 - MLT1F1 LTR MaLR -3 564 457 3304 138 25 6 chr10 1699692 1700206 -143889082 - MER1A DNA MER1_type -5 524 1 23 0 0 0 chr10 1700655 1700678 -143888610 + AT_rich Low_complexity Low_complexity 1 23 0 345 269 32 11 chr10 1704249 1704342 -143884946 + MIR SINE MIR 124 218 -44 181 228 158 79 chr10 1707112 1707213 -143882075 + MIR SINE MIR 18 126 -82 1172 99 0 0 chr10 1707865 1708007 -143881281 - AluSq/x SINE Alu -170 142 1 256 250 65 46 chr10 1710168 1710276 -143879012 + MER5A DNA MER1_type 59 168 -21 667 166 24 19 chr10 1712344 1712536 -143876752 + GA-rich Low_complexity Low_complexity 1 190 -237 186 43 0 0 chr10 1712536 1712559 -143876729 + (GGGA)n Simple_repeat Simple_repeat 4 26 0 667 166 24 19 chr10 1712559 1712769 -143876519 + GA-rich Low_complexity Low_complexity 190 427 0 189 300 89 11 chr10 1714274 1714364 -143874924 + L2 LINE L2 1354 1450 -1864 588 218 0 0 chr10 1714651 1714825 -143874463 + (CA)n Simple_repeat Simple_repeat 1 174 0 225 163 61 0 chr10 1714826 1714875 -143874413 - MLT1B LTR MaLR -336 54 3 328 296 138 0 chr10 1716414 1716573 -143872715 - MIR SINE MIR -64 198 18 247 202 18 175 chr10 1716575 1716689 -143872599 + MER58 DNA MER1_type 1 96 -119 418 214 41 0 chr10 1716693 1716791 -143872497 + MER58 DNA MER1_type 2318 2419 -1 2496 67 0 0 chr10 1718532 1718830 -143870458 + AluY SINE Alu 1 298 -13 235 273 68 0 chr10 1720250 1720338 -143868950 + LTR33 LTR ERVL 2 95 -426 273 274 53 0 chr10 1721907 1722020 -143867268 + LTR33 LTR ERVL 385 503 -18 537 239 8 0 chr10 1722455 1722572 -143866716 - AluSg/x SINE Alu -21 289 172 744 242 15 14 chr10 1722968 1723261 -143866027 + L1ME1 LINE L1 2286 2576 -3806 3614 274 84 19 chr10 1723264 1723363 -143865925 + L1ME1 LINE L1 2802 2893 -3489 2141 118 14 0 chr10 1723363 1723650 -143865638 - AluSc SINE Alu -18 291 1 3614 274 84 19 chr10 1723650 1725293 -143863995 + L1ME1 LINE L1 2893 4658 -1724 1342 184 0 0 chr10 1725304 1725521 -143863767 - AluJb SINE Alu 0 312 96 2684 231 66 32 chr10 1725557 1726707 -143862581 + L1ME1 LINE L1 4674 5855 -547 805 327 18 3 chr10 1726854 1727187 -143862101 + L1ME1 LINE L1 5891 6228 -174 529 229 88 35 chr10 1727829 1727970 -143861318 - MIR SINE MIR -72 190 37 1642 203 3 16 chr10 1727970 1728314 -143860974 + AluJb SINE Alu 6 312 0 529 229 88 35 chr10 1728314 1728342 -143860946 - MIR SINE MIR -225 37 12 24 0 0 0 chr10 1728665 1728689 -143860599 + AT_rich Low_complexity Low_complexity 1 24 0 23 33 0 0 chr10 1728976 1729006 -143860282 + AT_rich Low_complexity Low_complexity 1 30 0 259 114 0 0 chr10 1730838 1730882 -143858406 - HSMAR1 DNA Mariner -1243 44 1 184 321 57 0 chr10 1733200 1733253 -143856035 - MIR3 SINE MIR -48 160 105 330 328 103 29 chr10 1734178 1734382 -143854906 - L2 LINE L2 -1 3312 3094 1998 120 0 11 chr10 1734721 1735039 -143854249 + AluSg SINE Alu 33 310 0 222 222 0 19 chr10 1735225 1735279 -143854009 + CT-rich Low_complexity Low_complexity 1 53 0 322 261 13 21 chr10 1736255 1736495 -143852793 + (CA)n Simple_repeat Simple_repeat 1 237 0 1575 215 35 81 chr10 1736815 1737311 -143851977 + MLT2B1 LTR ERVL 1 518 -2 1055 206 59 0 chr10 1737311 1737530 -143851758 + MER46A DNA MER2_type 1 232 -4 796 74 8 8 chr10 1737538 1737660 -143851628 + (TCTA)n Simple_repeat Simple_repeat 3 124 0 1575 215 35 81 chr10 1737660 1737699 -143851589 + MLT2B1 LTR ERVL 481 520 0 1970 159 10 0 chr10 1740249 1740544 -143848744 + AluJb SINE Alu 1 298 -14 207 162 35 35 chr10 1740683 1740856 -143848432 + (TA)n Simple_repeat Simple_repeat 1 173 0 269 171 57 0 chr10 1740869 1740957 -143848331 + (TA)n Simple_repeat Simple_repeat 1 93 0 505 320 39 11 chr10 1742570 1742751 -143846537 - MIR SINE MIR -10 252 67 2086 89 7 14 chr10 1743576 1743890 -143845398 + AluSg SINE Alu 1 312 0 268 31 0 0 chr10 1743858 1743910 -143845378 + (CAAAA)n Simple_repeat Simple_repeat 3 54 0 271 234 0 0 chr10 1744098 1744145 -143845143 - L3 LINE CR1 -112 1465 1419 252 137 0 0 chr10 1744650 1744701 -143844587 + (CA)n Simple_repeat Simple_repeat 2 52 0 2254 107 0 0 chr10 1745745 1746036 -143843252 + AluSx SINE Alu 1 291 -21 285 340 97 0 chr10 1746214 1746317 -143842971 + L2 LINE L2 3199 3311 -2 21 0 0 0 chr10 1746579 1746600 -143842688 + AT_rich Low_complexity Low_complexity 1 21 0 347 211 0 7 chr10 1746703 1746850 -143842438 + (CA)n Simple_repeat Simple_repeat 2 147 0 302 297 159 12 chr10 1747030 1747196 -143842092 - MIR SINE MIR -58 150 14 285 217 86 99 chr10 1749955 1750107 -143839181 - L2 LINE L2 -93 3179 3030 180 219 0 0 chr10 1751335 1751376 -143837912 + (TG)n Simple_repeat Simple_repeat 1 41 0 308 330 23 0 chr10 1751389 1751477 -143837811 - L1MC4 LINE L1 -1339 6703 6614 225 186 71 29 chr10 1751478 1751548 -143837740 + L1MCa LINE L1 1996 2068 -4358 248 264 0 9 chr10 1751550 1751660 -143837628 + (TATG)n Simple_repeat Simple_repeat 4 112 0 332 246 107 3 chr10 1754176 1754340 -143834948 + MER67D LTR ERV1 274 514 0 353 175 10 0 chr10 1755454 1755557 -143833731 + (CA)n Simple_repeat Simple_repeat 1 104 0 540 200 0 0 chr10 1755619 1755799 -143833489 + (CA)n Simple_repeat Simple_repeat 1 180 0 418 191 0 22 chr10 1755830 1756013 -143833275 + (CA)n Simple_repeat Simple_repeat 2 180 0 275 369 37 0 chr10 1756429 1756616 -143832672 + Charlie8 DNA MER1_type 28 221 -2196 215 291 18 0 chr10 1758909 1758964 -143830324 - MIR SINE MIR -64 144 89 330 26 0 0 chr10 1759378 1759417 -143829871 + (TG)n Simple_repeat Simple_repeat 2 40 0 244 363 71 0 chr10 1759883 1759996 -143829292 + MIR SINE MIR 48 168 -94 200 238 95 71 chr10 1761218 1761344 -143827944 + MIR SINE MIR 24 152 -110 630 203 68 0 chr10 1762071 1762189 -143827099 - FLAM_A SINE Alu -7 126 1 426 207 0 0 chr10 1764777 1764859 -143824429 - MER94 DNA DNA -52 82 1 498 380 22 0 chr10 1767023 1767207 -143822081 + MIR3 SINE MIR 14 201 -7 196 303 278 25 chr10 1768590 1768752 -143820536 - MIR SINE MIR -28 234 32 21 0 0 0 chr10 1770225 1770246 -143819042 + AT_rich Low_complexity Low_complexity 1 21 0 192 200 0 0 chr10 1770719 1770779 -143818509 + (TG)n Simple_repeat Simple_repeat 1 60 0 2180 112 14 0 chr10 1772568 1772862 -143816426 - AluSx SINE Alu -12 300 3 23 33 0 0 chr10 1773162 1773192 -143816096 + AT_rich Low_complexity Low_complexity 1 30 0 2649 127 33 55 chr10 1774520 1774976 -143814312 - MER83 LTR ERV1 -2 446 1 340 291 108 54 chr10 1775097 1775392 -143813896 - L1MC4a LINE L1 -1934 5874 5564 223 26 77 0 chr10 1775517 1775556 -143813732 + T-rich Low_complexity Low_complexity 1 42 0 2295 168 8 0 chr10 1776554 1776941 -143812347 + MLT1B LTR MaLR 1 390 0 290 259 63 63 chr10 1777072 1777230 -143812058 + Charlie5 DNA MER1_type 2401 2558 -54 198 0 0 0 chr10 1777438 1777460 -143811828 + (TG)n Simple_repeat Simple_repeat 1 22 0 257 303 55 28 chr10 1777512 1777621 -143811667 + L2 LINE L2 3199 3310 -3 1597 21 0 16 chr10 1780864 1781054 -143808234 - L1PA4 LINE L1 -4 6151 5965 262 282 129 16 chr10 1782570 1782694 -143806594 - MER103 DNA DNA -12 154 17 210 91 0 0 chr10 1783168 1783201 -143806087 + (T)n Simple_repeat Simple_repeat 1 33 0 447 159 0 28 chr10 1783464 1783571 -143805717 + CT-rich Low_complexity Low_complexity 3 106 0 2036 159 7 0 chr10 1783579 1783887 -143805401 - AluSx SINE Alu 0 312 3 210 143 0 0 chr10 1784064 1784099 -143805189 + (GGGA)n Simple_repeat Simple_repeat 4 38 0 180 0 0 0 chr10 1784987 1785007 -143804281 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1913 127 0 12 chr10 1785016 1785275 -143804013 - AluSx SINE Alu -56 256 1 4661 154 47 9 chr10 1785537 1786533 -143802755 + L1PA16 LINE L1 5118 6161 -5 254 57 0 0 chr10 1786533 1786568 -143802720 + L1PA16 LINE L1 6127 6161 -5 237 286 0 59 chr10 1788909 1788950 -143800338 + (CATATA)n Simple_repeat Simple_repeat 3 45 -69 183 80 0 0 chr10 1788950 1788975 -143800313 + (CA)n Simple_repeat Simple_repeat 2 26 0 237 286 0 59 chr10 1788975 1789052 -143800236 + (CATATA)n Simple_repeat Simple_repeat 45 114 0 248 307 72 42 chr10 1789395 1789561 -143799727 + MIR3 SINE MIR 14 184 -24 671 207 0 0 chr10 1790038 1790159 -143799129 + MLT1B LTR MaLR 1 121 -269 415 233 103 0 chr10 1790905 1791021 -143798267 + MIR SINE MIR 133 260 -2 281 267 27 0 chr10 1793001 1793076 -143796212 + L2 LINE L2 3191 3267 -5 273 147 29 15 chr10 1798185 1798253 -143791035 + (TA)n Simple_repeat Simple_repeat 1 69 0 180 0 0 0 chr10 1800303 1800323 -143788965 + (T)n Simple_repeat Simple_repeat 1 20 0 21 0 0 0 chr10 1800893 1800914 -143788374 + AT_rich Low_complexity Low_complexity 1 21 0 449 238 156 0 chr10 1804698 1804820 -143784468 + MIR SINE MIR 36 176 -86 316 292 128 32 chr10 1806520 1806739 -143782549 - MIR SINE MIR -21 241 2 1789 110 0 0 chr10 1807922 1808187 -143781101 + AluSx SINE Alu 50 314 0 1078 164 5 21 chr10 1812697 1812886 -143776402 + AluJb SINE Alu 34 219 -93 1901 270 28 24 chr10 1814167 1814749 -143774539 + L1MC2 LINE L1 156 739 -5825 783 175 81 6 chr10 1814749 1814909 -143774379 + MER30B DNA MER1_type 19 190 0 3685 196 57 21 chr10 1814956 1816128 -143773160 + L1MC2 LINE L1 574 1802 -4762 * 4762 178 39 24 chr10 1816115 1816213 -143773075 + L1MC2 LINE L1 5609 5704 -1058 2517 8 0 0 chr10 1816213 1816481 -143772807 + AluY SINE Alu 44 311 0 4762 178 39 24 chr10 1816481 1817421 -143771867 + L1MC2 LINE L1 5704 6664 -98 282 329 0 0 chr10 1818126 1818208 -143771080 + MER5B DNA MER1_type 97 178 0 230 140 40 140 chr10 1820954 1821054 -143768234 + MER39 LTR ERV1 62 151 -556 486 0 0 0 chr10 1821635 1821689 -143767599 + (CA)n Simple_repeat Simple_repeat 2 55 0 22 0 0 0 chr10 1822269 1822291 -143766997 + AT_rich Low_complexity Low_complexity 1 22 0 204 125 0 0 chr10 1822729 1822761 -143766527 + (CATATA)n Simple_repeat Simple_repeat 2 33 0 273 176 0 88 chr10 1822764 1822866 -143766422 + L1MC4 LINE L1 6611 6703 -1339 285 288 0 0 chr10 1873617 1873690 -143715598 + (TA)n Simple_repeat Simple_repeat 2 74 0 1660 53 5 0 chr10 1874323 1874529 -143714759 - AluY SINE Alu -3 308 102 1756 140 19 0 chr10 1875046 1875310 -143713978 - AluSg SINE Alu -18 292 24 1508 168 38 52 chr10 1875340 1875631 -143713657 - AluJb SINE Alu -25 287 1 23 0 0 0 chr10 1875820 1875843 -143713445 + AT_rich Low_complexity Low_complexity 1 23 0 1760 111 96 4 chr10 1875871 1876164 -143713124 + AluSp SINE Alu 1 317 0 2635 129 26 7 chr10 1876904 1877331 -143711957 + MER83 LTR ERV1 5 439 -9 298 226 73 15 chr10 1877466 1877603 -143711685 - L1ME4a LINE L1 -210 5911 5767 30 69 0 0 chr10 1877606 1877664 -143711624 + AT_rich Low_complexity Low_complexity 1 58 0 29 0 0 0 chr10 1877751 1877780 -143711508 + AT_rich Low_complexity Low_complexity 1 29 0 342 240 39 19 chr10 1877830 1877952 -143711336 - L1MC2 LINE L1 -10 7145 7017 4923 200 23 11 chr10 1878048 1879516 -143709772 - L1MC3 LINE L1 -109 7676 4724 1279 149 8 56 chr10 1879516 1879784 -143709504 - MER44D DNA MER2_type -84 525 1 441 246 0 0 chr10 1880842 1880976 -143708312 + (CA)n Simple_repeat Simple_repeat 1 134 0 183 122 163 0 chr10 1881362 1881411 -143707877 - MER5C DNA MER1_type -226 98 42 570 169 0 0 chr10 1881606 1881724 -143707564 + (TCTA)n Simple_repeat Simple_repeat 3 120 0 353 236 9 9 chr10 1881727 1881833 -143707455 - L1MC2 LINE L1 -2337 6282 6177 252 86 0 0 chr10 1882043 1882078 -143707210 + (TG)n Simple_repeat Simple_repeat 1 35 0 1159 200 18 18 chr10 1883295 1883575 -143705713 + L1 LINE L1 4000 4279 -1867 235 291 94 16 chr10 1883738 1883865 -143705423 - L1MC2 LINE L1 -1981 4976 4840 305 280 94 24 chr10 1883980 1884309 -143704979 - L1MC2 LINE L1 -2406 4551 4200 261 165 44 22 chr10 1884344 1884435 -143704853 + (TA)n Simple_repeat Simple_repeat 1 93 0 275 276 25 45 chr10 1884460 1884659 -143704629 - L1MC2 LINE L1 -2832 4125 3931 22 56 0 0 chr10 1884993 1885029 -143704259 + AT_rich Low_complexity Low_complexity 1 36 0 1336 167 85 35 chr10 1885068 1885350 -143703938 + AluJb SINE Alu 3 298 -14 28 61 0 0 chr10 1886157 1886206 -143703082 + AT_rich Low_complexity Low_complexity 1 49 0 2400 24 0 14 chr10 1887191 1887495 -143701793 - L1PA4 LINE L1 -181 5974 5675 1283 67 0 46 chr10 1887495 1887722 -143701566 + L1PA4 LINE L1 5970 6155 0 24 32 0 0 chr10 1889900 1889931 -143699357 + AT_rich Low_complexity Low_complexity 1 31 0 824 55 31 0 chr10 1891223 1891350 -143697938 + (TCTA)n Simple_repeat Simple_repeat 4 134 0 1810 163 25 0 chr10 1891408 1891691 -143697597 + AluSx SINE Alu 1 290 -22 1211 156 20 8 chr10 1892056 1892306 -143696982 - L1MA4 LINE L1 0 6300 6048 21 0 0 0 chr10 1892624 1892645 -143696643 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 1893448 1893469 -143695819 + AT_rich Low_complexity Low_complexity 1 21 0 785 302 121 6 chr10 1894484 1895162 -143694126 - L1MC2 LINE L1 -3161 3796 3041 450 293 87 16 chr10 1895603 1896124 -143693164 - L1MC2 LINE L1 -4471 2486 1971 338 242 123 76 chr10 1896132 1896434 -143692854 - L1MC2 LINE L1 -5046 1914 1599 186 393 0 22 chr10 1896465 1896554 -143692734 - L2 LINE L2 -43 3229 3143 1320 179 126 60 chr10 1896789 1897244 -143692044 - L1MA9 LINE L1 -4 6308 5825 1060 279 61 0 chr10 1900489 1900865 -143688423 - L1MC2 LINE L1 -6086 773 375 233 296 20 0 chr10 1900981 1901079 -143688209 - L1MC2 LINE L1 -6457 402 303 2097 118 28 0 chr10 1901261 1901548 -143687740 + AluSx SINE Alu 1 295 -17 24 77 0 0 chr10 1902015 1902067 -143687221 + AT_rich Low_complexity Low_complexity 1 52 0 198 0 0 0 chr10 1902594 1902616 -143686672 + (T)n Simple_repeat Simple_repeat 1 22 0 1601 193 11 0 chr10 1903469 1903754 -143685534 + AluJo SINE Alu 5 292 -20 385 295 46 18 chr10 1904749 1905034 -143684254 + HAL1 LINE L1 993 1285 -1222 22 0 0 0 chr10 1907682 1907704 -143681584 + AT_rich Low_complexity Low_complexity 1 22 0 2131 125 0 3 chr10 1907706 1908009 -143681279 + AluSx SINE Alu 1 302 -10 225 0 0 0 chr10 1909179 1909204 -143680084 + (TTTTA)n Simple_repeat Simple_repeat 5 29 0 2293 108 0 0 chr10 1909324 1909621 -143679667 + AluSq SINE Alu 1 297 -16 313 322 43 6 chr10 1909916 1910252 -143679036 - L1ME LINE L1 -661 5501 5155 1602 179 55 10 chr10 1910775 1911065 -143678223 - AluJb SINE Alu -9 303 1 798 251 45 0 chr10 1911092 1911315 -143677973 + MLT2C2 LTR ERVL 1 233 -231 318 50 0 0 chr10 1911330 1911370 -143677918 + (TG)n Simple_repeat Simple_repeat 2 41 0 2843 200 38 22 chr10 1911376 1912091 -143677197 + ERVL LTR ERVL 3105 3830 -1934 327 203 0 0 chr10 1912117 1912186 -143677102 + (TG)n Simple_repeat Simple_repeat 2 70 0 700 193 0 8 chr10 1912515 1912634 -143676654 - AluJb SINE Alu -183 129 12 1843 158 0 7 chr10 1912853 1913156 -143676132 + AluJo SINE Alu 1 301 -11 204 245 0 0 chr10 1913831 1913880 -143675408 + T-rich Low_complexity Low_complexity 1 49 0 216 314 0 0 chr10 1913981 1914051 -143675237 + T-rich Low_complexity Low_complexity 2 71 0 2207 124 0 0 chr10 1919600 1919907 -143669381 - AluSg SINE Alu -3 307 1 205 161 0 0 chr10 1920492 1920523 -143668765 + (TTCA)n Simple_repeat Simple_repeat 3 33 0 224 291 0 0 chr10 1920525 1920580 -143668708 - L2 LINE L2 -6 3307 3253 1874 143 0 34 chr10 1921093 1921417 -143667871 + AluSx SINE Alu 1 314 0 461 299 65 23 chr10 1921932 1922283 -143667005 + LTR16C LTR ERVL 124 489 -2 1378 216 28 48 chr10 1923063 1923340 -143665948 - MLT1C LTR MaLR -14 453 187 2544 74 0 0 chr10 1923340 1923651 -143665637 - AluY SINE Alu 0 311 1 1378 216 28 48 chr10 1923651 1923835 -143665453 - MLT1C LTR MaLR -280 187 1 299 234 0 39 chr10 1924233 1924310 -143664978 + CT-rich Low_complexity Low_complexity 3 76 0 28 107 0 0 chr10 1924708 1924820 -143664468 + AT_rich Low_complexity Low_complexity 1 112 0 343 325 32 0 chr10 1925161 1925287 -143664001 + MIR SINE MIR 16 145 -117 601 333 51 30 chr10 1927271 1927607 -143661681 - L2 LINE L2 -711 2603 2261 474 228 43 47 chr10 1927623 1927855 -143661433 + MER76 LTR ERV 1 231 -457 2195 96 7 0 chr10 1928722 1929025 -143660263 + AluSg SINE Alu 1 305 -5 2300 111 0 0 chr10 1930865 1931171 -143658117 + AluSq SINE Alu 2 307 -6 6186 277 46 26 chr10 1931318 1932951 -143656337 - L1MCb LINE L1 -758 5806 4206 1614 170 0 47 chr10 1932951 1933269 -143656019 - AluJb SINE Alu -2 310 8 6186 277 46 26 chr10 1933269 1934890 -143654398 - L1MCb LINE L1 -2358 4206 2589 2722 31 0 0 chr10 1934890 1935210 -143654078 + L1PA4 LINE L1 5833 6152 -3 6186 277 46 26 chr10 1935210 1935501 -143653787 - L1MCb LINE L1 -3975 2589 2305 2279 263 60 24 chr10 1935652 1937376 -143651912 - L1MCb LINE L1 -4545 2019 122 513 326 15 34 chr10 1937515 1937777 -143651511 - L1MC4 LINE L1 -939 6904 6587 403 285 135 53 chr10 1937897 1938695 -143650593 - L1MC4a LINE L1 -1193 6615 5728 208 204 0 61 chr10 1939234 1939283 -143650005 + L2 LINE L2 3187 3232 -81 21 36 0 0 chr10 1939482 1939510 -143649778 + AT_rich Low_complexity Low_complexity 1 28 0 229 261 137 13 chr10 1939516 1939669 -143649619 + L1MC/D LINE L1 5305 5476 -2332 246 266 0 0 chr10 1940765 1940844 -143648444 + (TG)n Simple_repeat Simple_repeat 1 79 0 252 0 0 0 chr10 1941454 1941482 -143647806 + (A)n Simple_repeat Simple_repeat 1 28 0 363 307 85 28 chr10 1943253 1943465 -143645823 - MIR SINE MIR -12 250 27 234 91 0 0 chr10 1945037 1945070 -143644218 + (TG)n Simple_repeat Simple_repeat 2 34 0 916 99 0 23 chr10 1945611 1945742 -143643546 + Charlie3 DNA MER1_type 2347 2474 -236 624 322 120 7 chr10 1945767 1946226 -143643062 + L2 LINE L2 1415 1925 -1389 421 227 104 25 chr10 1947874 1948037 -143641251 - MLT1F LTR MaLR -8 534 359 192 125 0 0 chr10 1949026 1949058 -143640230 + (A)n Simple_repeat Simple_repeat 1 32 0 23 33 0 0 chr10 1949178 1949208 -143640080 + AT_rich Low_complexity Low_complexity 1 30 0 1431 175 137 30 chr10 1949879 1950216 -143639072 - THE1C LTR MaLR -2 373 1 856 210 0 0 chr10 1950409 1950576 -143638712 - AluJb SINE Alu -9 303 137 21 0 0 0 chr10 1950998 1951019 -143638269 + AT_rich Low_complexity Low_complexity 1 21 0 2151 174 12 26 chr10 1951019 1951443 -143637845 - L1MA7 LINE L1 0 6291 5874 1996 116 17 33 chr10 1951729 1952030 -143637258 + AluJb SINE Alu 3 298 -14 232 309 0 0 chr10 1952344 1952428 -143636860 + (TA)n Simple_repeat Simple_repeat 2 85 0 1450 134 138 79 chr10 1952991 1953282 -143636006 - AluJb SINE Alu -4 308 1 457 275 116 21 chr10 1953652 1954047 -143635241 + MLT1H LTR MaLR 72 527 -22 292 359 0 9 chr10 1954342 1954448 -143634840 + MLT1-int LTR MaLR 441 545 -826 210 71 0 0 chr10 1956315 1956343 -143632945 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 371 300 47 107 chr10 1956852 1957152 -143632136 + L1ME3 LINE L1 204 485 -6078 1454 284 55 22 chr10 1957235 1957870 -143631418 + L1ME1 LINE L1 5506 6161 -5 1131 274 41 19 chr10 1957867 1958453 -143630835 + L1ME3 LINE L1 1630 2403 -4160 * 2850 261 76 57 chr10 1958522 1958559 -143630729 + L1ME3 LINE L1 3652 3687 -2670 1840 124 16 0 chr10 1958559 1958817 -143630471 + AluSq SINE Alu 34 295 -18 2850 261 76 57 chr10 1958817 1960968 -143628320 + L1ME3 LINE L1 3687 5875 -482 25 51 0 0 chr10 1961089 1961128 -143628160 + AT_rich Low_complexity Low_complexity 1 39 0 6538 137 7 1 chr10 1961145 1962361 -143626927 - L1PB1 LINE L1 -1 6150 4925 936 266 113 11 chr10 1962362 1962715 -143626573 + L1ME3 LINE L1 5992 6380 -18 2491 70 0 0 chr10 1962945 1963246 -143626042 - AluY SINE Alu -10 301 1 28 48 0 0 chr10 1963460 1963502 -143625786 + AT_rich Low_complexity Low_complexity 1 42 0 494 31 16 0 chr10 1964361 1964425 -143624863 + (TTCC)n Simple_repeat Simple_repeat 4 68 0 235 306 83 17 chr10 1964936 1965116 -143624172 - L1MCc LINE L1 -5972 451 260 2256 93 7 0 chr10 1965484 1965773 -143623515 - AluSx SINE Alu -21 291 1 618 242 0 0 chr10 1966526 1966658 -143622630 - L1PB4 LINE L1 -2 6154 6023 249 196 0 0 chr10 1966844 1966895 -143622393 + (TATATG)n Simple_repeat Simple_repeat 4 54 0 39 22 0 0 chr10 1967696 1967742 -143621546 + AT_rich Low_complexity Low_complexity 1 46 0 192 40 0 0 chr10 1968546 1968571 -143620717 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 213 196 0 0 chr10 1969033 1969079 -143620209 + (CA)n Simple_repeat Simple_repeat 2 47 0 2130 125 3 0 chr10 1969567 1969862 -143619426 - AluSg SINE Alu -14 296 1 328 228 139 0 chr10 1971591 1971692 -143617596 + MLT1E LTR MaLR 22 136 -457 837 236 75 12 chr10 1971776 1972017 -143617271 + MLT1E LTR MaLR 289 544 -49 522 304 34 29 chr10 1972085 1972292 -143616996 + MIR SINE MIR 23 230 -32 686 268 115 102 chr10 1973543 1975112 -143614176 - HAL1 LINE L1 -110 2397 808 279 328 86 27 chr10 1975544 1975730 -143613558 - MIR SINE MIR -19 243 47 470 128 0 70 chr10 1976267 1976353 -143612935 + MADE1 DNA Mariner 1 80 0 4588 51 45 4 chr10 1976425 1976978 -143612310 - L1PA7 LINE L1 -7 6147 5572 216 319 104 52 chr10 1977892 1978027 -143611261 + MIR SINE MIR 47 188 -74 2158 228 84 16 chr10 1978998 1979603 -143609685 + L1MB5 LINE L1 5529 6174 0 294 50 0 0 chr10 1979620 1979660 -143609628 + L1MB4 LINE L1 6139 6178 -2 360 55 36 0 chr10 1979661 1979716 -143609572 - Alu SINE Alu 0 300 244 2320 103 0 0 chr10 1979826 1980136 -143609152 - AluY SINE Alu 0 311 2 207 0 0 0 chr10 1980735 1980758 -143608530 + (T)n Simple_repeat Simple_repeat 1 23 0 643 274 96 5 chr10 1980928 1981147 -143608141 - MIR SINE MIR -20 242 4 231 277 69 40 chr10 1982237 1982338 -143606950 - MER5A DNA MER1_type -48 141 38 188 286 58 52 chr10 1982439 1982593 -143606695 - MIR SINE MIR -106 156 2 31 58 0 0 chr10 1983629 1983681 -143605607 + AT_rich Low_complexity Low_complexity 1 52 0 225 57 38 57 chr10 1984239 1984292 -143604996 + (TAGA)n Simple_repeat Simple_repeat 4 55 0 581 106 33 50 chr10 1984325 1984505 -143604783 + (TAGA)n Simple_repeat Simple_repeat 3 179 0 598 115 59 49 chr10 1984519 1984992 -143604296 + (TAGA)n Simple_repeat Simple_repeat 1 477 0 1749 173 0 19 chr10 1985121 1985433 -143603855 + AluJb SINE Alu 7 312 0 302 80 20 0 chr10 1986353 1986403 -143602885 + (CAAAA)n Simple_repeat Simple_repeat 1 51 0 554 0 15 0 chr10 1986436 1986502 -143602786 + (TAGA)n Simple_repeat Simple_repeat 2 68 0 315 0 0 0 chr10 1987012 1987047 -143602241 + (CA)n Simple_repeat Simple_repeat 2 36 0 364 181 60 45 chr10 1987479 1987612 -143601676 - LTR16A1 LTR ERVL -1 456 322 206 246 44 9 chr10 1988109 1988223 -143601065 + (TTATA)n Simple_repeat Simple_repeat 1 118 0 258 250 34 34 chr10 1988235 1988411 -143600877 + (TTATA)n Simple_repeat Simple_repeat 5 180 0 359 322 28 17 chr10 1988690 1988703 -143600585 + MIR SINE MIR 77 88 -174 1860 162 88 20 chr10 1988703 1989054 -143600234 + THE1C LTR MaLR 1 375 0 359 322 28 17 chr10 1989054 1989220 -143600068 + MIR SINE MIR 88 258 -4 2247 105 3 16 chr10 1989775 1990081 -143599207 + AluSx SINE Alu 1 302 -10 61 37 0 0 chr10 1991441 1991523 -143597765 + AT_rich Low_complexity Low_complexity 1 82 0 24 0 0 0 chr10 1992066 1992090 -143597198 + AT_rich Low_complexity Low_complexity 1 24 0 3316 109 10 41 chr10 1992101 1992616 -143596672 - L1MA1 LINE L1 -4 6298 5800 701 139 9 5 chr10 1992652 1992781 -143596507 - L1ME LINE L1 -358 5806 5676 541 92 26 13 chr10 1994286 1994362 -143594926 - MADE1 DNA Mariner 0 80 4 21 36 0 0 chr10 1994367 1994395 -143594893 + AT_rich Low_complexity Low_complexity 1 28 0 319 298 30 23 chr10 1994455 1994586 -143594702 - MER115 DNA AcHobo -11 682 551 859 140 0 22 chr10 1995654 1995790 -143593498 + AluSq/x SINE Alu 1 133 -180 2123 126 0 31 chr10 1995792 1996109 -143593179 + AluSx SINE Alu 1 307 -5 675 282 78 3 chr10 1997127 1997475 -143591813 - LTR16A LTR ERVL -20 430 57 23 68 0 0 chr10 1998263 1998307 -143590981 + AT_rich Low_complexity Low_complexity 1 44 0 836 263 127 58 chr10 1998891 1999324 -143589964 + MLT1C LTR MaLR 1 463 -4 1982 234 29 29 chr10 1999328 1999762 -143589526 + MLT1C-int LTR MaLR 1 414 -957 2001 112 63 0 chr10 1999762 2000047 -143589241 + AluSc SINE Alu 1 303 -6 1982 234 29 29 chr10 2000047 2000285 -143589003 + MLT1C-int LTR MaLR 414 650 -721 1106 256 86 14 chr10 2000356 2000704 -143588584 + MLT1C-int LTR MaLR 974 1346 -25 1088 228 66 89 chr10 2000715 2001185 -143588103 + MLT1C LTR MaLR 1 459 -8 213 338 0 0 chr10 2001228 2001305 -143587983 + MIR SINE MIR 67 143 -65 21 36 0 0 chr10 2002114 2002142 -143587146 + AT_rich Low_complexity Low_complexity 1 28 0 2469 101 51 25 chr10 2002238 2002593 -143586695 - THE1B LTR MaLR 0 364 1 2188 118 7 7 chr10 2002825 2003131 -143586157 - AluSc SINE Alu -3 306 1 29 28 0 0 chr10 2003359 2003395 -143585893 + AT_rich Low_complexity Low_complexity 1 36 0 259 269 219 17 chr10 2004859 2005097 -143584191 - L2 LINE L2 -2740 574 289 1432 247 31 3 chr10 2006778 2007130 -143582158 + MLT1A1 LTR MaLR 1 362 -3 1857 145 16 10 chr10 2007909 2007977 -143581311 - AluSx SINE Alu 0 589 523 1114 47 0 62 chr10 2007977 2008169 -143581119 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1857 145 16 10 chr10 2008169 2008496 -143580792 - AluSx SINE Alu -66 523 1 443 248 20 13 chr10 2010184 2010490 -143578798 + (TG)n Simple_repeat Simple_repeat 1 308 0 8052 135 2 1 chr10 2010820 2012036 -143577252 - L1P LINE L1 -1411 4735 3518 788 118 8 0 chr10 2012072 2012199 -143577089 + (GGAA)n Simple_repeat Simple_repeat 2 129 0 425 259 130 12 chr10 2013457 2013619 -143575669 - MLT1G1 LTR MaLR -388 207 27 1554 243 19 3 chr10 2013670 2014049 -143575239 + MLT1B LTR MaLR 4 388 -2 1988 145 3 0 chr10 2015863 2016170 -143573118 - AluSx SINE Alu 0 308 1 222 37 0 0 chr10 2016201 2016228 -143573060 + (TG)n Simple_repeat Simple_repeat 1 27 0 1658 243 39 0 chr10 2016642 2017054 -143572234 - MLT2B1 LTR ERVL -2 518 91 678 211 7 26 chr10 2017353 2017505 -143571783 - MLT2B2 LTR ERVL -366 149 1 722 188 12 6 chr10 2018902 2019233 -143570055 + (CAT)n Simple_repeat Simple_repeat 1 333 0 4962 208 52 18 chr10 2020193 2021332 -143567956 + L1MC2 LINE L1 19 1196 -5230 8057 239 35 41 chr10 2021338 2021742 -143567546 + L1MC2 LINE L1 2756 3161 -3463 2072 150 3 6 chr10 2021742 2022055 -143567233 + AluSx SINE Alu 1 312 0 8057 239 35 41 chr10 2022055 2024293 -143564995 + L1MC2 LINE L1 3161 5365 -1259 2191 98 10 14 chr10 2024293 2024588 -143564700 - AluSg1 SINE Alu -15 294 1 8057 239 35 41 chr10 2024588 2025391 -143563897 + L1MC2 LINE L1 5365 6172 -452 2807 180 19 6 chr10 2025391 2025908 -143563380 + L1MC1 LINE L1 5810 6333 0 22 35 0 0 chr10 2027001 2027030 -143562258 + AT_rich Low_complexity Low_complexity 1 29 0 7814 38 2 2 chr10 2027329 2028578 -143560710 - L1PA5 LINE L1 -4 6150 4904 339 286 78 39 chr10 2028822 2029077 -143560211 + MLT2E LTR ERVL 342 606 -22 237 337 21 11 chr10 2029309 2029404 -143559884 + MLT-int LTR MaLR 423 518 -1217 2206 116 0 0 chr10 2029654 2029946 -143559342 + AluSx SINE Alu 5 296 -16 226 188 62 10 chr10 2030638 2030734 -143558554 + (CCGCG)n Simple_repeat Simple_repeat 1 101 0 193 122 24 49 chr10 2030749 2030831 -143558457 + (CCGCG)n Simple_repeat Simple_repeat 4 83 0 206 115 19 39 chr10 2030831 2030883 -143558405 + C-rich Low_complexity Low_complexity 5 55 0 56 39 0 0 chr10 2030883 2030960 -143558328 + GC_rich Low_complexity Low_complexity 1 77 0 32 43 0 0 chr10 2030988 2031034 -143558254 + GC_rich Low_complexity Low_complexity 1 46 0 2294 129 8 6 chr10 2031062 2031418 -143557870 + MER4D LTR ERV1 547 903 0 1168 134 18 80 chr10 2031522 2031746 -143557542 + AluJb SINE Alu 82 291 -21 486 75 0 0 chr10 2031747 2031814 -143557474 + (TAGA)n Simple_repeat Simple_repeat 2 68 0 619 300 57 17 chr10 2032052 2032352 -143556936 - L1ME3A LINE L1 -301 5869 5558 258 301 16 78 chr10 2032367 2032420 -143556868 - L1ME3A LINE L1 -875 5271 5216 2047 115 7 3 chr10 2032420 2032706 -143556582 - AluSq SINE Alu -26 287 1 258 301 16 78 chr10 2032706 2032845 -143556443 - L1ME3A LINE L1 -930 5216 5091 336 48 0 0 chr10 2032978 2033020 -143556268 + (TG)n Simple_repeat Simple_repeat 2 43 0 313 319 39 16 chr10 2033055 2033237 -143556051 - L1ME3A LINE L1 -1199 4947 4762 21 0 0 0 chr10 2033389 2033410 -143555878 + AT_rich Low_complexity Low_complexity 1 21 0 559 86 0 0 chr10 2033457 2033527 -143555761 - U6 snRNA snRNA 0 107 38 358 309 88 10 chr10 2033529 2033733 -143555555 - L1ME3A LINE L1 -1369 4777 4558 393 276 116 36 chr10 2033737 2034038 -143555250 - L1ME3A LINE L1 -2458 3688 3364 1196 257 82 23 chr10 2034084 2034890 -143554398 - L1M4 LINE L1 -1390 5254 4362 388 137 0 82 chr10 2035015 2035088 -143554200 - MSTD LTR MaLR -328 68 2 237 261 26 26 chr10 2035089 2035204 -143554084 - L1 LINE L1 -2351 4293 4179 22 0 0 0 chr10 2035208 2035230 -143554058 + AT_rich Low_complexity Low_complexity 1 22 0 957 276 46 39 chr10 2035327 2035577 -143553711 - L1M4 LINE L1 -4543 2103 1847 222 37 0 0 chr10 2035577 2035604 -143553684 + (TTTC)n Simple_repeat Simple_repeat 4 30 0 957 276 46 39 chr10 2035604 2035787 -143553501 - L1M4 LINE L1 -4799 1847 1667 * 2064 272 25 53 chr10 2035784 2036541 -143552747 - L1M4 LINE L1 -5794 748 13 234 0 71 24 chr10 2036601 2036643 -143552645 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 478 346 62 62 chr10 2038349 2038565 -143550723 + HAL1 LINE L1 51 266 -2241 1700 177 17 7 chr10 2038565 2038864 -143550424 + AluJb SINE Alu 3 304 -8 478 346 62 62 chr10 2038864 2038965 -143550323 + HAL1 LINE L1 266 366 -2141 1390 246 33 87 chr10 2038965 2039515 -143549773 + MLT2B1 LTR ERVL 1 520 0 478 346 62 62 chr10 2039515 2040081 -143549207 + HAL1 LINE L1 365 935 -1572 825 167 24 0 chr10 2040090 2040216 -143549072 + AluJb SINE Alu 136 264 -48 225 0 0 0 chr10 2040217 2040242 -143549046 + (GA)n Simple_repeat Simple_repeat 2 26 0 319 258 154 49 chr10 2040251 2040354 -143548934 + HAL1 LINE L1 965 1056 -1451 267 253 0 48 chr10 2040354 2040379 -143548909 + AluYb8 SINE Alu 112 132 -176 2459 53 7 7 chr10 2040379 2040681 -143548607 + AluY SINE Alu 1 302 -9 319 258 154 49 chr10 2040437 2040858 -143548430 + HAL1 LINE L1 1056 1302 -1205 791 295 56 36 chr10 2040880 2041270 -143548018 + HAL1 LINE L1 1483 1880 -627 24 0 0 0 chr10 2041696 2041720 -143547568 + AT_rich Low_complexity Low_complexity 1 24 0 248 263 62 56 chr10 2041726 2041905 -143547383 + L1MC4a LINE L1 5594 5773 -2035 433 182 34 7 chr10 2041908 2042056 -143547232 + (TAGA)n Simple_repeat Simple_repeat 4 155 0 1191 133 0 0 chr10 2042148 2042321 -143546967 - AluSg/x SINE Alu -3 309 137 345 181 0 56 chr10 2042322 2042394 -143546894 - AluJ/FLAM SINE Alu -234 68 1 260 154 135 39 chr10 2042418 2042522 -143546766 + L1MC4a LINE L1 5866 5979 -1829 5288 37 2 0 chr10 2042879 2043469 -143545819 - LTR10C LTR ERV1 0 591 1 324 0 0 0 chr10 2044398 2044434 -143544854 + (CATA)n Simple_repeat Simple_repeat 2 37 0 679 54 0 21 chr10 2047232 2047325 -143541963 + L1PA5 LINE L1 6064 6154 0 779 90 90 45 chr10 2047325 2047457 -143541831 + L1PA16 LINE L1 6025 6164 -2 5274 228 54 65 chr10 2047500 2048444 -143540844 - L1MC3 LINE L1 -12 7773 6820 180 0 0 0 chr10 2048444 2048464 -143540824 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 5274 228 54 65 chr10 2048464 2048603 -143540685 - L1MC3 LINE L1 -965 6820 6681 1304 161 150 29 chr10 2048603 2048877 -143540411 + AluSg1 SINE Alu 1 307 -2 5274 228 54 65 chr10 2048877 2049548 -143539740 - L1MC3 LINE L1 -1104 6681 6037 1734 176 0 23 chr10 2050070 2050377 -143538911 - AluJo SINE Alu -12 300 1 330 328 174 44 chr10 2051244 2051860 -143537428 - L1MEd LINE L1 -5218 901 206 439 307 168 27 chr10 2052338 2052892 -143536396 + L1MC4 LINE L1 7270 7901 -141 189 0 0 0 chr10 2052894 2052915 -143536373 + (TA)n Simple_repeat Simple_repeat 2 22 0 209 225 28 14 chr10 2052952 2053023 -143536265 + GA-rich Low_complexity Low_complexity 1 72 0 21 57 0 0 chr10 2053097 2053132 -143536156 + AT_rich Low_complexity Low_complexity 1 35 0 576 326 80 32 chr10 2053275 2053669 -143535619 - L2 LINE L2 -1 3312 2890 935 84 0 53 chr10 2053669 2053859 -143535429 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 576 326 80 32 chr10 2053859 2053937 -143535351 - L2 LINE L2 -423 2890 2817 1241 148 10 1 chr10 2054056 2056357 -143532931 + ALR/Alpha Satellite centromeric 1 2322 -21 1217 163 7 1 chr10 2056463 2059702 -143529586 + ALR/Alpha Satellite centromeric 1 3259 -28 1460 204 99 3 chr10 2060698 2061031 -143528257 + MLT1A1 LTR MaLR 1 365 0 233 206 0 15 chr10 2061627 2061695 -143527593 + CT-rich Low_complexity Low_complexity 5 71 0 489 355 37 25 chr10 2062231 2062555 -143526733 + L1MEc LINE L1 45 372 -6024 393 284 133 33 chr10 2062899 2063110 -143526178 + L1MEc LINE L1 786 1017 -5379 1950 288 114 52 chr10 2063136 2064314 -143524974 + L1MCc LINE L1 17 1306 -5278 1977 151 14 0 chr10 2064314 2064605 -143524683 - AluSx SINE Alu -17 295 1 1950 288 114 52 chr10 2064605 2065022 -143524266 + L1MCc LINE L1 1306 1696 -4888 1909 155 3 0 chr10 2065462 2065753 -143523535 - AluJb SINE Alu -20 292 1 359 270 203 31 chr10 2065768 2065931 -143523357 + HAL1 LINE L1 1701 1891 -616 2287 68 0 17 chr10 2066628 2066921 -143522367 + AluY SINE Alu 1 288 -23 1566 185 83 19 chr10 2067391 2067716 -143521572 - MER7A DNA MER2_type -2 344 1 273 306 25 64 chr10 2067767 2067924 -143521364 - MER5A DNA MER1_type -4 185 35 1934 50 0 25 chr10 2069390 2069632 -143519656 - L1PA8 LINE L1 -7 6165 5930 383 284 245 29 chr10 2070469 2070603 -143518685 + L2 LINE L2 1232 1336 -1978 279 0 0 0 chr10 2070603 2070634 -143518654 + (CA)n Simple_repeat Simple_repeat 1 31 0 383 284 245 29 chr10 2070634 2070707 -143518581 + L2 LINE L2 1336 1484 -1830 1206 135 6 0 chr10 2070722 2070900 -143518388 + AluSq SINE Alu 134 312 -1 981 256 49 47 chr10 2071594 2072027 -143517261 + L1M4 LINE L1 4597 5033 -1113 2787 22 0 10 chr10 2072027 2072341 -143516947 + AluY SINE Alu 1 311 0 981 256 49 47 chr10 2072341 2072418 -143516870 + L1M4 LINE L1 5033 5108 -1038 2596 147 18 35 chr10 2072690 2073072 -143516216 + MSTA LTR MaLR 1 388 -40 2251 104 3 0 chr10 2073072 2073361 -143515927 + AluSp SINE Alu 1 290 -23 306 0 0 0 chr10 2073364 2073398 -143515890 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 2596 147 18 35 chr10 2073398 2073446 -143515842 + MSTA LTR MaLR 390 428 0 245 283 0 0 chr10 2073723 2073783 -143515505 + L2 LINE L2 3254 3313 0 365 167 0 0 chr10 2074714 2074774 -143514514 - L1MA5 LINE L1 -220 6080 6021 1267 118 10 20 chr10 2074792 2074996 -143514292 + L1MA5 LINE L1 6095 6296 -4 259 395 27 37 chr10 2075568 2075864 -143513424 + L3 LINE CR1 163 455 -1122 27 73 0 0 chr10 2076388 2076443 -143512845 + AT_rich Low_complexity Low_complexity 1 55 0 1210 229 85 15 chr10 2077243 2077645 -143511643 + MER31B LTR ERV1 1 430 -36 182 244 111 0 chr10 2078424 2078469 -143510819 + MIR SINE MIR 48 97 -165 339 233 282 6 chr10 2078776 2078939 -143510349 - L1MC4 LINE L1 -1115 6927 6720 403 252 8 31 chr10 2080534 2080661 -143508627 + MIR SINE MIR 2 125 -137 407 286 44 20 chr10 2080815 2081018 -143508270 - L2 LINE L2 -1391 1923 1716 225 194 11 43 chr10 2081028 2081121 -143508167 + (TG)n Simple_repeat Simple_repeat 2 91 0 4988 213 37 25 chr10 2083324 2084889 -143504399 - L1MC1 LINE L1 -18 6298 4720 247 248 0 59 chr10 2084888 2084989 -143504299 - L1MC1 LINE L1 -1817 4312 4218 * 619 122 0 0 chr10 2085229 2085311 -143503977 + AluSg/x SINE Alu 212 293 -17 1545 234 30 55 chr10 2085597 2086072 -143503216 + MLT1C LTR MaLR 5 467 0 214 315 36 27 chr10 2086490 2086601 -143502687 - MIR3 SINE MIR -28 180 69 298 250 40 0 chr10 2086990 2087066 -143502222 + MER45A DNA AcHobo 99 177 -1 726 309 105 69 chr10 2089072 2089225 -143500063 - L1MC1 LINE L1 -4870 1249 1103 367 19 19 19 chr10 2089225 2089278 -143500010 + (CA)n Simple_repeat Simple_repeat 2 54 0 726 309 105 69 chr10 2089278 2090445 -143498843 - L1MC1 LINE L1 -5016 1103 2 333 221 47 12 chr10 2090515 2090601 -143498687 + LTR16A LTR ERVL 53 141 -309 246 269 34 42 chr10 2090701 2090820 -143498468 + LTR16A LTR ERVL 303 420 -30 1882 168 0 13 chr10 2091225 2091523 -143497765 + AluSx SINE Alu 1 294 -18 22 80 0 0 chr10 2092303 2092353 -143496935 + AT_rich Low_complexity Low_complexity 1 50 0 1718 71 0 0 chr10 2092433 2092644 -143496644 - AluY SINE Alu -18 293 83 405 174 23 23 chr10 2092645 2092731 -143496557 + MLT1A2 LTR MaLR 127 212 -162 2035 118 0 57 chr10 2092744 2093058 -143496230 + AluSx SINE Alu 3 298 -14 430 341 32 23 chr10 2093122 2093339 -143495949 + MIR SINE MIR 44 262 0 603 222 98 31 chr10 2093841 2094035 -143495253 + MER3 DNA MER1_type 3 209 0 1746 122 34 27 chr10 2094348 2094643 -143494645 - AluSx SINE Alu -15 297 1 25 0 0 0 chr10 2096446 2096471 -143492817 + AT_rich Low_complexity Low_complexity 1 25 0 836 197 58 114 chr10 2096832 2097228 -143492060 - MLT1A2 LTR MaLR 0 374 1 662 301 119 13 chr10 2097902 2098290 -143490998 + MLT1G LTR MaLR 68 496 -94 915 308 32 22 chr10 2098899 2099302 -143489986 - MLT1I LTR MaLR -2 407 1 23 0 0 0 chr10 2099630 2099653 -143489635 + AT_rich Low_complexity Low_complexity 1 23 0 220 203 0 86 chr10 2101132 2101329 -143487959 + (GTGTG)n Simple_repeat Simple_repeat 1 180 0 339 273 19 73 chr10 2101587 2101740 -143487548 - MIR3 SINE MIR -67 141 10 615 142 20 81 chr10 2102980 2103128 -143486160 - L1M LINE L1 -775 5393 5255 251 154 0 19 chr10 2103574 2103626 -143485662 + CT-rich Low_complexity Low_complexity 1 51 0 375 283 71 45 chr10 2103966 2104164 -143485124 - L2 LINE L2 -10 3303 3101 1523 180 58 6 chr10 2104345 2104490 -143484798 - L1ME LINE L1 -712 5454 5318 276 30 0 0 chr10 2104490 2104523 -143484765 + (ATG)n Simple_repeat Simple_repeat 2 34 0 1523 180 58 6 chr10 2104523 2104779 -143484509 - L1ME LINE L1 -848 5318 5043 2959 185 100 14 chr10 2104785 2105086 -143484202 + L1MB1 LINE L1 5463 5737 -431 438 20 0 0 chr10 2105086 2105137 -143484151 + (TG)n Simple_repeat Simple_repeat 1 51 0 2959 185 100 14 chr10 2105137 2105484 -143483804 + L1MB1 LINE L1 5737 6167 -1 297 63 16 63 chr10 2105525 2105588 -143483700 + (GGA)n Simple_repeat Simple_repeat 3 62 0 306 194 0 16 chr10 2106326 2106388 -143482900 - MER31B LTR ERV1 0 466 406 2006 264 31 16 chr10 2107029 2107736 -143481552 - L1ME LINE L1 -2227 3919 3202 824 214 5 20 chr10 2107737 2107933 -143481355 - AluJo SINE Alu -1 311 119 2648 260 65 7 chr10 2107933 2108891 -143480397 - L1ME LINE L1 -2961 3185 2173 198 356 79 28 chr10 2110116 2110332 -143478956 + MIR SINE MIR 34 260 -2 396 0 0 0 chr10 2110973 2111017 -143478271 + (CA)n Simple_repeat Simple_repeat 2 45 0 237 163 0 0 chr10 2111017 2111066 -143478222 + (TA)n Simple_repeat Simple_repeat 1 49 0 2199 125 29 35 chr10 2111068 2111445 -143477843 + THE1C LTR MaLR 1 375 0 902 199 49 135 chr10 2112672 2113079 -143476209 + MLT1B LTR MaLR 1 372 -18 411 238 67 50 chr10 2113899 2114139 -143475149 - L1MC5 LINE L1 -102 7859 7616 35 0 0 0 chr10 2114339 2114374 -143474914 + AT_rich Low_complexity Low_complexity 1 35 0 25 95 0 0 chr10 2114401 2114475 -143474813 + AT_rich Low_complexity Low_complexity 1 74 0 1481 176 37 11 chr10 2115827 2116100 -143473188 - AluJo SINE Alu -32 280 1 33 0 0 0 chr10 2117336 2117369 -143471919 + AT_rich Low_complexity Low_complexity 1 33 0 21 36 0 0 chr10 2120223 2120251 -143469037 + AT_rich Low_complexity Low_complexity 1 28 0 225 230 0 0 chr10 2121607 2121733 -143467555 + (TG)n Simple_repeat Simple_repeat 2 127 0 437 218 6 0 chr10 2121776 2121946 -143467342 + (TG)n Simple_repeat Simple_repeat 2 172 0 22 0 0 0 chr10 2122725 2122747 -143466541 + AT_rich Low_complexity Low_complexity 1 22 0 297 330 26 0 chr10 2122894 2123009 -143466279 + MIR SINE MIR 30 147 -61 2194 85 0 30 chr10 2125231 2125536 -143463752 + AluSc SINE Alu 1 296 -13 458 262 25 98 chr10 2125655 2125899 -143463389 - L1MC3 LINE L1 -7 7778 7553 1404 201 28 14 chr10 2126325 2126614 -143462674 + AluJo SINE Alu 1 293 -19 22 0 0 0 chr10 2126636 2126658 -143462630 + AT_rich Low_complexity Low_complexity 1 22 0 186 167 0 0 chr10 2126680 2126716 -143462572 + GA-rich Low_complexity Low_complexity 2 37 0 1962 128 6 35 chr10 2126833 2127145 -143462143 - AluSx SINE Alu -9 303 1 198 269 13 51 chr10 2127878 2127956 -143461332 + MER5A DNA MER1_type 30 104 -85 2187 140 48 28 chr10 2129169 2129526 -143459762 + THE1B LTR MaLR 1 364 0 308 281 73 83 chr10 2130217 2130396 -143458892 + L1M4 LINE L1 3784 3963 -2183 2120 133 0 3 chr10 2130396 2130704 -143458584 + AluSx SINE Alu 1 307 -5 308 281 73 83 chr10 2130704 2130908 -143458380 + L1M4 LINE L1 3963 4163 -1983 2010 274 31 15 chr10 2131554 2132266 -143457022 - L1M4 LINE L1 -1017 5129 4407 188 234 0 16 chr10 2132266 2132330 -143456958 + CT-rich Low_complexity Low_complexity 1 63 0 921 189 98 20 chr10 2132346 2132428 -143456860 - L1MB3 LINE L1 -1 6182 6108 471 96 96 0 chr10 2132428 2132501 -143456787 + MADE1 DNA Mariner 1 80 0 921 189 98 20 chr10 2132501 2132672 -143456616 - L1MB3 LINE L1 -75 6108 5909 803 148 19 39 chr10 2133302 2133457 -143455831 - L1MA4 LINE L1 -16 6284 6133 534 185 99 0 chr10 2133789 2133940 -143455348 - L1MA4 LINE L1 -169 6131 5966 25 0 0 0 chr10 2136171 2136196 -143453092 + AT_rich Low_complexity Low_complexity 1 25 0 2562 58 3 0 chr10 2136288 2136597 -143452691 + AluY SINE Alu 1 310 -1 27 0 0 0 chr10 2136695 2136722 -143452566 + AT_rich Low_complexity Low_complexity 1 27 0 869 214 6 0 chr10 2136722 2136881 -143452407 - FRAM SINE Alu -19 157 1 1835 116 0 58 chr10 2139564 2139856 -143449432 + AluSx SINE Alu 32 306 -6 1672 173 13 86 chr10 2143577 2143832 -143445456 - MER39 LTR ERV1 -3 704 487 1578 119 13 0 chr10 2143832 2144058 -143445230 + AluSx SINE Alu 58 286 -26 1672 173 13 86 chr10 2144058 2144196 -143445092 - MER39 LTR ERV1 -220 487 340 926 266 43 14 chr10 2144276 2144554 -143444734 + MLT1F LTR MaLR 1 286 -256 277 273 23 68 chr10 2145714 2145890 -143443398 + (CAGCC)n Simple_repeat Simple_repeat 5 172 0 445 205 17 0 chr10 2146783 2146900 -143442388 + (TATG)n Simple_repeat Simple_repeat 2 120 0 238 194 32 16 chr10 2147426 2147488 -143441800 + GA-rich Low_complexity Low_complexity 2 64 0 1462 170 11 11 chr10 2149063 2149357 -143439931 + AluJo SINE Alu 12 305 0 251 333 52 26 chr10 2149642 2149795 -143439493 - MIR3 SINE MIR -33 175 19 1046 198 0 0 chr10 2149987 2150169 -143439119 - Tigger5 DNA MER2_type 0 2323 2142 187 333 17 0 chr10 2150979 2151039 -143438249 + L2 LINE L2 3200 3260 -12 231 61 0 0 chr10 2151905 2151938 -143437350 + (TG)n Simple_repeat Simple_repeat 2 34 0 1219 206 59 45 chr10 2152497 2153081 -143436207 + L1MCa LINE L1 1769 2452 -3974 782 237 59 0 chr10 2153092 2153278 -143436010 + MER74A LTR ERVL 43 239 -319 23 33 0 0 chr10 2153904 2153934 -143435354 + AT_rich Low_complexity Low_complexity 1 30 0 1817 113 0 12 chr10 2154422 2154679 -143434609 - AluSg SINE Alu -17 293 40 1106 65 7 0 chr10 2154681 2154819 -143434469 - AluSq/x SINE Alu -174 139 1 37 23 0 0 chr10 2155086 2155130 -143434158 + AT_rich Low_complexity Low_complexity 1 44 0 297 308 0 0 chr10 2155574 2155665 -143433623 + (TG)n Simple_repeat Simple_repeat 1 91 0 428 316 7 0 chr10 2155679 2155834 -143433454 + (TG)n Simple_repeat Simple_repeat 2 157 0 1578 99 130 16 chr10 2155921 2156202 -143433086 - AluSg1 SINE Alu 0 310 1 3332 110 18 18 chr10 2156447 2156602 -143432686 + MER75 DNA T2_type 3 157 -357 2128 99 11 0 chr10 2156602 2156907 -143432381 - AluSp SINE Alu 0 308 1 3332 110 18 18 chr10 2156907 2157248 -143432040 + MER75 DNA T2_type 156 500 -14 328 339 17 39 chr10 2157459 2157639 -143431649 - MER5B DNA MER1_type 0 178 3 3284 126 28 16 chr10 2159296 2159803 -143429485 - MER75 DNA T2_type -1 513 1 180 0 0 0 chr10 2160098 2160118 -143429170 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 479 239 68 106 chr10 2161195 2161517 -143427771 + MLT1H LTR MaLR 230 539 -10 25 31 0 0 chr10 2162043 2162075 -143427213 + AT_rich Low_complexity Low_complexity 1 32 0 25 31 0 0 chr10 2162544 2162576 -143426712 + AT_rich Low_complexity Low_complexity 1 32 0 1789 119 0 11 chr10 2162584 2162844 -143426444 + AluSc SINE Alu 1 257 -52 1856 142 57 0 chr10 2163461 2163792 -143425496 - L1MA5A LINE L1 0 6297 5948 777 232 130 72 chr10 2165405 2165750 -143423538 + MLT1D LTR MaLR 1 365 -140 2253 108 85 18 chr10 2166082 2166423 -143422865 + THE1B LTR MaLR 1 364 0 213 175 0 0 chr10 2168921 2168961 -143420327 + (CA)n Simple_repeat Simple_repeat 2 41 0 2141 120 0 10 chr10 2169092 2169108 -143420180 - AluSx SINE Alu -15 297 282 234 0 0 0 chr10 2169108 2169134 -143420154 + (TA)n Simple_repeat Simple_repeat 2 27 0 2141 120 0 10 chr10 2169134 2169417 -143419871 - AluSx SINE Alu -30 282 1 919 251 78 31 chr10 2169836 2170268 -143419020 + MLT1E LTR MaLR 46 593 0 24 0 0 0 chr10 2170999 2171023 -143418265 + AT_rich Low_complexity Low_complexity 1 24 0 506 339 13 34 chr10 2171974 2172210 -143417078 + HERV16 LTR ERVL 1317 1547 -3449 325 248 157 81 chr10 2172274 2172484 -143416804 + HERV16 LTR ERVL 1688 1913 -3083 601 337 28 17 chr10 2172667 2172955 -143416333 + HERV16 LTR ERVL 2221 2511 -3253 2004 135 0 0 chr10 2173557 2173858 -143415430 + AluSx SINE Alu 2 302 0 28 29 0 0 chr10 2174266 2174301 -143414987 + AT_rich Low_complexity Low_complexity 1 35 0 1796 137 4 0 chr10 2174312 2174575 -143414713 - AluSq SINE Alu -48 265 2 1363 194 19 0 chr10 2174575 2174832 -143414456 - L1PA16 LINE L1 -11 6155 5891 961 282 173 38 chr10 2175902 2176692 -143412596 + L2 LINE L2 1802 2698 -616 383 305 53 27 chr10 2176900 2177087 -143412201 + L2 LINE L2 3095 3286 -27 491 283 33 28 chr10 2177277 2177457 -143411831 + MIR SINE MIR 11 191 -71 205 204 61 34 chr10 2177780 2177927 -143411361 + (TTATA)n Simple_repeat Simple_repeat 2 152 0 27 29 0 0 chr10 2178059 2178093 -143411195 + AT_rich Low_complexity Low_complexity 1 34 0 820 133 44 0 chr10 2180349 2180483 -143408805 + Tigger1 DNA MER2_type 24 163 -2255 2160 167 33 31 chr10 2180483 2181032 -143408256 - MLT2A2 LTR ERVL 0 554 1 10566 131 52 31 chr10 2181043 2182010 -143407278 + Tigger1 DNA MER2_type 170 1193 -1225 1982 147 40 7 chr10 2182010 2182310 -143406978 + AluSx SINE Alu 1 310 -2 10566 131 52 31 chr10 2182310 2183135 -143406153 + Tigger1 DNA MER2_type 1193 1999 -419 1915 204 101 69 chr10 2183135 2183622 -143405666 + LTR9 LTR ERV1 1 512 -100 2544 54 3 19 chr10 2183622 2183938 -143405350 - AluY SINE Alu 0 311 1 1915 204 101 69 chr10 2183938 2184043 -143405245 + LTR9 LTR ERV1 512 612 0 * 2059 181 45 19 chr10 2184043 2184452 -143404836 + Tigger1 DNA MER2_type 1999 2418 0 1493 210 0 7 chr10 2184702 2184997 -143404291 + AluJo SINE Alu 1 293 -19 1908 176 0 3 chr10 2185287 2185599 -143403689 + AluSx SINE Alu 1 311 -1 261 0 0 0 chr10 2186053 2186082 -143403206 + (TG)n Simple_repeat Simple_repeat 1 29 0 288 105 0 0 chr10 2187256 2187294 -143401994 + Alu SINE Alu 1 38 -264 1115 190 26 4 chr10 2187383 2187615 -143401673 - MLT1B LTR MaLR -1 389 153 2479 35 6 26 chr10 2188835 2189146 -143400142 + AluY SINE Alu 1 305 -6 186 133 0 0 chr10 2189281 2189311 -143399977 + (CAAAA)n Simple_repeat Simple_repeat 5 34 0 4805 120 14 14 chr10 2189472 2190162 -143399126 - LTR8 LTR ERV1 0 691 2 26 0 0 0 chr10 2191096 2191122 -143398166 + AT_rich Low_complexity Low_complexity 1 26 0 227 349 9 9 chr10 2191612 2191718 -143397570 - MIR SINE MIR -108 154 49 2359 110 0 0 chr10 2191728 2192037 -143397251 - AluSq SINE Alu -4 309 1 2499 233 14 28 chr10 2192432 2193079 -143396209 - L1MC3 LINE L1 -7 7847 7210 2759 243 67 23 chr10 2193098 2194007 -143395281 - L1MC3 LINE L1 -743 5472 5001 1858 161 0 3 chr10 2194007 2194335 -143394953 - AluSx SINE Alu 0 327 1 2759 243 67 23 chr10 2194335 2195287 -143394001 - L1MC3 LINE L1 -1214 5001 4092 1703 272 127 41 chr10 2195288 2196997 -143392291 - L1MC3 LINE L1 -3712 2503 812 2216 109 3 3 chr10 2196997 2197308 -143391980 + AluSx SINE Alu 1 311 -1 1703 272 127 41 chr10 2197308 2197561 -143391727 - L1MC3 LINE L1 -5403 812 582 668 244 51 25 chr10 2197542 2197739 -143391549 - L1MC3 LINE L1 -6155 241 40 * 1455 151 4 21 chr10 2199398 2199637 -143389651 + AluSg/x SINE Alu 71 305 -7 759 180 0 16 chr10 2200502 2200685 -143388603 + (CA)n Simple_repeat Simple_repeat 1 180 0 585 312 42 64 chr10 2203314 2203766 -143385522 - LTR16A1 LTR ERVL 0 457 16 2027 204 24 5 chr10 2204067 2204483 -143384805 - MSTB LTR MaLR -2 424 1 264 263 50 0 chr10 2204487 2204567 -143384721 - L1MC/D LINE L1 -1920 5888 5805 23 0 0 0 chr10 2205363 2205386 -143383902 + AT_rich Low_complexity Low_complexity 1 23 0 350 239 20 107 chr10 2206592 2206789 -143382499 + HAL1 LINE L1 1384 1563 -944 552 185 0 0 chr10 2207090 2207182 -143382106 - AluJ/FLAM SINE Alu -220 92 1 2004 101 42 14 chr10 2207948 2208236 -143381052 + AluSx SINE Alu 1 296 -16 2309 206 37 85 chr10 2209196 2209683 -143379605 - L1MC2 LINE L1 -396 5948 5497 2051 138 10 0 chr10 2209683 2209973 -143379315 - AluSg SINE Alu -17 293 1 2309 206 37 85 chr10 2209973 2210346 -143378942 - L1MC2 LINE L1 -847 5497 5107 2273 71 0 0 chr10 2210750 2211071 -143378217 + AluY SINE Alu 1 321 0 2132 104 0 4 chr10 2211467 2211747 -143377541 - AluSq SINE Alu -34 279 1 203 363 29 0 chr10 2211861 2211963 -143377325 - MIR SINE MIR -58 204 100 1601 233 25 0 chr10 2212000 2212407 -143376881 - MER47B DNA MER2_type 0 418 2 274 243 21 95 chr10 2212938 2213181 -143376107 + L1MC5 LINE L1 7549 7773 -188 191 122 0 49 chr10 2213194 2213235 -143376053 + (GAAA)n Simple_repeat Simple_repeat 4 42 0 201 365 0 32 chr10 2213831 2213987 -143375301 + (CAATG)n Simple_repeat Simple_repeat 3 153 0 306 234 24 24 chr10 2214249 2214541 -143374747 + GA-rich Low_complexity Low_complexity 1 292 0 180 0 0 0 chr10 2215437 2215457 -143373831 + (TA)n Simple_repeat Simple_repeat 2 21 0 2191 115 0 0 chr10 2215463 2215758 -143373530 - AluSq SINE Alu -18 295 1 908 233 125 15 chr10 2215768 2216111 -143373177 - L1MC3 LINE L1 -1 7784 7404 3279 245 108 26 chr10 2216556 2217979 -143371309 - L1MC3 LINE L1 -335 7450 5919 202 314 115 32 chr10 2218240 2218396 -143370892 + L2 LINE L2 2614 2782 -532 754 194 22 0 chr10 2218415 2218554 -143370734 - FLAM_C SINE Alu 0 143 2 3966 24 0 0 chr10 2218563 2219024 -143370264 - L1PA3 LINE L1 0 6155 5695 32 26 0 0 chr10 2219086 2219125 -143370163 + AT_rich Low_complexity Low_complexity 1 39 0 296 195 23 35 chr10 2220546 2220633 -143368655 - MER53 DNA DNA -1 188 103 512 175 0 0 chr10 2221122 2221219 -143368069 - L1MA5A LINE L1 -10 6287 6191 753 239 157 11 chr10 2221668 2221948 -143367340 + MER33 DNA MER1_type 1 321 -3 1135 184 4 12 chr10 2222298 2222543 -143366745 - L1MA6 LINE L1 -1 6299 6057 295 109 0 0 chr10 2222568 2222614 -143366674 + L1M2 LINE L1 5444 5489 -811 1943 106 7 3 chr10 2222620 2222951 -143366337 + AluSx SINE Alu 1 332 0 529 329 112 47 chr10 2223442 2224276 -143365012 + L1M4 LINE L1 2225 3112 -3034 1779 106 13 0 chr10 2224455 2224690 -143364598 + AluSx SINE Alu 64 301 -11 424 287 103 0 chr10 2224976 2225112 -143364176 + MIR SINE MIR 4 153 -109 323 322 44 16 chr10 2227059 2227242 -143362046 - MER46C DNA MER2_type -46 292 105 298 176 22 33 chr10 2227518 2227609 -143361679 + (TA)n Simple_repeat Simple_repeat 1 90 0 28 61 0 0 chr10 2227644 2227693 -143361595 + AT_rich Low_complexity Low_complexity 1 49 0 302 136 64 16 chr10 2227705 2227830 -143361458 + (TA)n Simple_repeat Simple_repeat 2 132 0 297 133 20 41 chr10 2227869 2227967 -143361321 + (TA)n Simple_repeat Simple_repeat 1 96 0 395 196 68 7 chr10 2227981 2228249 -143361039 + (TA)n Simple_repeat Simple_repeat 1 284 0 24 32 0 0 chr10 2228375 2228406 -143360882 + AT_rich Low_complexity Low_complexity 1 31 0 243 61 0 0 chr10 2230150 2230183 -143359105 + (CAT)n Simple_repeat Simple_repeat 1 33 0 1428 250 57 38 chr10 2230320 2231456 -143357832 + L1MCb LINE L1 475 1638 -4885 1815 142 40 7 chr10 2231456 2231752 -143357536 + AluSx SINE Alu 1 306 -6 1428 250 57 38 chr10 2231752 2231788 -143357500 + L1MCb LINE L1 1638 1672 -4851 1246 222 104 21 chr10 2231786 2232265 -143357023 + L1M4 LINE L1 5312 5828 -346 * 2298 222 12 42 chr10 2232272 2232917 -143356371 - L1 LINE L1 -3311 2835 2210 219 338 95 0 chr10 2233284 2233358 -143355930 - L2 LINE L2 -38 3234 3154 258 254 0 0 chr10 2234280 2234347 -143354941 + (TG)n Simple_repeat Simple_repeat 2 68 0 1638 177 0 38 chr10 2234584 2234901 -143354387 + AluJo SINE Alu 1 305 -7 23 33 0 0 chr10 2234967 2234997 -143354291 + AT_rich Low_complexity Low_complexity 1 30 0 23 33 0 0 chr10 2235965 2235995 -143353293 + AT_rich Low_complexity Low_complexity 1 30 0 7852 13 7 0 chr10 2238201 2239222 -143350066 - L1PA2 LINE L1 0 6155 5133 5001 191 31 20 chr10 2241895 2243476 -143345812 + L1MC1 LINE L1 4732 6333 0 340 216 0 0 chr10 2243491 2243565 -143345723 + AluJ/FRAM SINE Alu 228 301 -1 27 0 0 0 chr10 2244338 2244365 -143344923 + AT_rich Low_complexity Low_complexity 1 27 0 22 35 0 0 chr10 2244404 2244433 -143344855 + AT_rich Low_complexity Low_complexity 1 29 0 24 53 0 0 chr10 2244701 2244739 -143344549 + AT_rich Low_complexity Low_complexity 1 38 0 381 307 135 5 chr10 2245566 2245781 -143343507 + MLT1J1 LTR MaLR 202 444 -2 290 314 44 7 chr10 2246246 2246383 -143342905 + MLT1J2 LTR MaLR 47 188 -262 26 30 0 0 chr10 2246597 2246630 -143342658 + AT_rich Low_complexity Low_complexity 1 33 0 1947 104 11 31 chr10 2246930 2247217 -143342071 - AluSg SINE Alu -3 307 27 280 179 0 0 chr10 2247306 2247362 -143341926 - MER4-int LTR ERV1 -5431 1167 1112 212 196 62 21 chr10 2247365 2247462 -143341826 + (CATG)n Simple_repeat Simple_repeat 3 103 0 * 354 297 0 0 chr10 2247442 2247587 -143341701 + (CA)n Simple_repeat Simple_repeat 1 145 0 398 286 183 43 chr10 2248928 2249463 -143339825 + L2 LINE L2 2366 2975 -339 189 333 10 62 chr10 2249681 2249777 -143339511 + L2 LINE L2 3142 3232 -40 898 246 36 70 chr10 2250527 2250884 -143338404 - MLT1A2 LTR MaLR 0 374 30 21 0 0 0 chr10 2251102 2251123 -143338165 + AT_rich Low_complexity Low_complexity 1 21 0 361 168 77 0 chr10 2251264 2251419 -143337869 + (TA)n Simple_repeat Simple_repeat 2 168 0 299 333 33 39 chr10 2251976 2252312 -143336976 + L1ME4a LINE L1 5540 5873 -248 2164 144 44 47 chr10 2252644 2253027 -143336261 + MER83 LTR ERV1 1 382 -66 26 0 0 0 chr10 2253027 2253053 -143336235 + AT_rich Low_complexity Low_complexity 1 26 0 1207 211 20 56 chr10 2253237 2253592 -143335696 - MLT1A1 LTR MaLR 0 365 24 752 208 119 36 chr10 2254558 2254752 -143334536 - L1MDb LINE L1 -5342 1201 972 2335 113 52 19 chr10 2254752 2255115 -143334173 + THE1C LTR MaLR 1 375 0 752 208 119 36 chr10 2255115 2255223 -143334065 - L1MDb LINE L1 -5571 972 874 327 286 112 29 chr10 2255431 2255637 -143333651 - L1MDb LINE L1 -6146 394 172 1114 58 0 0 chr10 2255677 2255814 -143333474 + AluY SINE Alu 172 308 -3 26 30 0 0 chr10 2256531 2256564 -143332724 + AT_rich Low_complexity Low_complexity 1 33 0 251 306 8 40 chr10 2256617 2256741 -143332547 - L1MEc LINE L1 -4646 1750 1631 197 194 0 15 chr10 2257729 2257796 -143331492 + GA-rich Low_complexity Low_complexity 1 66 0 671 132 14 14 chr10 2257834 2257978 -143331310 + GA-rich Low_complexity Low_complexity 4 147 0 358 362 6 17 chr10 2258037 2258214 -143331074 - MER5B DNA MER1_type 0 178 4 334 234 215 24 chr10 2258241 2258446 -143330842 - L2 LINE L2 -534 2780 2537 1335 249 22 11 chr10 2258483 2258848 -143330440 + MLT1A2 LTR MaLR 6 374 0 325 264 141 25 chr10 2258855 2259018 -143330270 - L2 LINE L2 -803 2511 2330 551 96 0 48 chr10 2260304 2260336 -143328952 + MADE1 DNA Mariner 2 34 -46 2381 78 0 44 chr10 2260336 2260656 -143328632 - AluY SINE Alu -5 306 1 551 96 0 48 chr10 2260656 2260706 -143328582 + MADE1 DNA Mariner 34 80 0 213 354 50 43 chr10 2260852 2261013 -143328275 + MIR SINE MIR 76 237 -25 2420 103 0 0 chr10 2262442 2262754 -143326534 - AluSx SINE Alu 0 312 1 327 287 21 64 chr10 2264357 2264545 -143324743 + L2 LINE L2 3031 3210 -103 2844 77 31 0 chr10 2265263 2265615 -143323673 + THE1B LTR MaLR 1 363 -1 627 235 92 0 chr10 2267755 2267908 -143321380 + MER5A DNA MER1_type 4 170 -19 186 43 0 0 chr10 2268560 2268583 -143320705 + (TTC)n Simple_repeat Simple_repeat 2 24 0 905 200 0 6 chr10 2269242 2269417 -143319871 + AluJb SINE Alu 137 310 -2 22 35 0 0 chr10 2271034 2271063 -143318225 + AT_rich Low_complexity Low_complexity 1 29 0 4168 185 39 22 chr10 2271070 2271870 -143317418 - L1MA6 LINE L1 -1 6299 5483 2041 125 3 29 chr10 2271870 2272183 -143317105 - AluSx SINE Alu -7 305 1 4168 185 39 22 chr10 2272183 2272231 -143317057 - L1MA6 LINE L1 -817 5483 5437 2305 137 91 10 chr10 2272377 2272771 -143316517 - MSTB LTR MaLR 0 426 1 256 0 0 71 chr10 2275299 2275341 -143313947 + (TTTTTA)n Simple_repeat Simple_repeat 2 40 0 2055 140 156 11 chr10 2275352 2275724 -143313564 + MSTA LTR MaLR 2 427 -1 1533 195 7 0 chr10 2275724 2276001 -143313287 - AluJb SINE Alu -33 279 1 320 69 379 0 chr10 2276010 2276068 -143313220 + MADE1 DNA Mariner 1 80 0 22 0 0 0 chr10 2276699 2276721 -143312567 + AT_rich Low_complexity Low_complexity 1 22 0 924 252 133 44 chr10 2276778 2277370 -143311918 + MER114 LTR ERV 1 645 -3 1595 216 54 43 chr10 2277540 2277984 -143311304 - MSTB2 LTR MaLR -2 455 7 1295 224 108 30 chr10 2278279 2278614 -143310674 - MLT1A2 LTR MaLR -13 361 1 387 330 45 6 chr10 2279675 2279851 -143309437 + L2 LINE L2 2229 2411 -903 484 210 31 6 chr10 2279915 2280077 -143309211 + CT-rich Low_complexity Low_complexity 2 167 0 518 304 136 50 chr10 2280148 2280797 -143308491 + L2 LINE L2 2587 3285 -28 1152 196 31 13 chr10 2281298 2281522 -143307766 - MLT1A1 LTR MaLR -2 363 136 426 205 0 0 chr10 2281531 2281614 -143307674 - MLT1A1 LTR MaLR -171 194 112 1010 177 15 35 chr10 2281620 2281818 -143307470 - MLT1A1 LTR MaLR -171 194 1 1293 236 54 0 chr10 2281835 2282186 -143307102 - L1MC3 LINE L1 0 7785 7416 * 3879 247 74 43 chr10 2282183 2282906 -143306382 - L1MC3 LINE L1 -759 5387 4687 1551 184 33 23 chr10 2282906 2283205 -143306083 - AluJb SINE Alu -10 302 1 3879 247 74 43 chr10 2283205 2285342 -143303946 - L1MC3 LINE L1 -1459 4687 3729 1336 220 34 54 chr10 2285344 2285822 -143303466 + L1ME1 LINE L1 2752 3219 -2927 22 0 0 0 chr10 2287023 2287045 -143302243 + AT_rich Low_complexity Low_complexity 1 22 0 216 336 14 41 chr10 2287093 2287178 -143302110 + MIR SINE MIR 111 192 -70 2161 125 7 0 chr10 2287178 2287474 -143301814 + AluSx SINE Alu 1 298 -14 216 336 14 41 chr10 2287474 2287534 -143301754 + MIR SINE MIR 192 252 -10 2087 273 41 19 chr10 2287893 2288622 -143300666 + L1ME1 LINE L1 5418 6162 -4 1817 168 21 71 chr10 2289099 2289481 -143299807 - THE1B LTR MaLR -1 363 1 208 219 78 16 chr10 2289554 2289618 -143299670 - L3 LINE CR1 -1304 273 206 186 337 61 18 chr10 2289659 2289822 -143299466 - MIR SINE MIR -70 192 23 228 200 0 0 chr10 2290707 2290777 -143298511 + (TA)n Simple_repeat Simple_repeat 1 70 0 355 254 58 96 chr10 2292373 2292561 -143296727 - L1ME3 LINE L1 0 6170 5983 2301 101 10 0 chr10 2292561 2292867 -143296421 - AluSx SINE Alu -3 309 1 355 254 58 96 chr10 2292867 2292982 -143296306 - L1ME3 LINE L1 -187 5983 5865 252 168 69 46 chr10 2293150 2293323 -143295965 + (CACTT)n Simple_repeat Simple_repeat 4 180 0 22 0 0 0 chr10 2294281 2294303 -143294985 + AT_rich Low_complexity Low_complexity 1 22 0 2090 128 3 7 chr10 2295012 2295310 -143293978 - AluSx SINE Alu -2 310 14 1250 183 57 103 chr10 2295895 2296196 -143293092 - AluJb SINE Alu -14 288 2 21 0 0 0 chr10 2296314 2296335 -143292953 + AT_rich Low_complexity Low_complexity 1 21 0 722 188 33 13 chr10 2296689 2296859 -143292429 - MLT1A1 LTR MaLR -4 405 215 225 346 77 10 chr10 2297033 2297137 -143292151 - L2 LINE L2 0 3272 3162 190 301 124 42 chr10 2298309 2298690 -143290598 - L2 LINE L2 -15 3298 2837 1077 229 47 28 chr10 2298690 2299053 -143290235 + MLT1A2 LTR MaLR 1 370 -4 190 301 124 42 chr10 2299053 2299090 -143290198 - L2 LINE L2 -476 2837 2804 286 224 142 30 chr10 2299226 2299360 -143289928 - L2 LINE L2 -513 2801 2653 1910 139 30 3 chr10 2299421 2299716 -143289572 + AluSx SINE Alu 1 303 -9 683 250 51 21 chr10 2299720 2299985 -143289303 - MER58 DNA MER1_type -36 2384 18 800 363 148 9 chr10 2300005 2300843 -143288445 - L2 LINE L2 -645 2669 1716 2029 221 0 3 chr10 2301094 2301471 -143287817 + MER44D DNA MER2_type 9 439 -166 1218 218 29 39 chr10 2301471 2301778 -143287510 - MLT2B3 LTR ERVL 0 554 251 837 214 0 6 chr10 2301895 2302063 -143287225 + MER44D DNA MER2_type 439 605 0 5530 174 26 17 chr10 2302492 2303192 -143286096 - L1MC1 LINE L1 -5 6328 5610 2007 212 15 5 chr10 2303192 2303583 -143285705 - MSTD LTR MaLR 0 396 2 5530 174 26 17 chr10 2303583 2303991 -143285297 - L1MC1 LINE L1 -723 5610 5207 914 153 10 89 chr10 2303991 2304194 -143285094 - AluJb SINE Alu -5 307 121 652 200 205 0 chr10 2304659 2304854 -143284434 + MER46A DNA MER2_type 2 236 0 27 49 0 0 chr10 2305280 2305321 -143283967 + AT_rich Low_complexity Low_complexity 1 41 0 212 0 36 0 chr10 2307718 2307746 -143281542 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 315 379 15 15 chr10 2308012 2308281 -143281007 + ERVL LTR ERVL 3236 3504 -2260 1392 301 52 7 chr10 2309750 2310344 -143278944 + L1M4 LINE L1 4142 4762 -1384 764 206 12 0 chr10 2310346 2310516 -143278772 - L1MC1 LINE L1 -1248 4898 4727 1223 207 48 42 chr10 2310533 2310910 -143278378 + MLT1D LTR MaLR 21 399 -106 728 201 49 0 chr10 2310912 2311056 -143278232 - L1MB1 LINE L1 -1 6167 6017 1955 53 0 0 chr10 2311104 2311332 -143277956 - L1PA5 LINE L1 0 6154 5927 989 138 20 31 chr10 2311342 2311537 -143277751 + L1MA4 LINE L1 6108 6300 0 239 311 118 7 chr10 2311582 2311717 -143277571 + MIR SINE MIR 110 259 -3 222 164 49 16 chr10 2311729 2311790 -143277498 + (TTATG)n Simple_repeat Simple_repeat 3 65 0 285 344 0 0 chr10 2312312 2312405 -143276883 + MIR SINE MIR 52 144 -64 855 161 0 60 chr10 2312485 2312684 -143276604 - L1MA4 LINE L1 -6 6294 6108 704 196 42 0 chr10 2312738 2312881 -143276407 + L1MB1 LINE L1 6019 6167 -1 24 0 0 0 chr10 2313090 2313114 -143276174 + AT_rich Low_complexity Low_complexity 1 24 0 2119 190 33 13 chr10 2313857 2314251 -143275037 - MER57A LTR ERV1 -1 402 1 1297 185 30 26 chr10 2314866 2315039 -143274249 - AluJo SINE Alu -9 303 127 185 83 28 0 chr10 2315039 2315075 -143274213 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 1297 185 30 26 chr10 2315075 2315203 -143274085 - AluJo SINE Alu -185 127 1 2795 178 20 79 chr10 2316378 2317026 -143272262 + LTR9 LTR ERV1 3 612 0 2037 119 1 48 chr10 2317284 2317818 -143271470 - MER4A LTR ERV1 0 664 1 3610 163 16 21 chr10 2318818 2319558 -143269730 + LTR1B LTR ERV1 1 826 0 30 45 0 0 chr10 2321039 2321083 -143268205 + AT_rich Low_complexity Low_complexity 1 44 0 2403 74 3 7 chr10 2321593 2321903 -143267385 - AluY SINE Alu -2 309 1 1919 136 0 3 chr10 2322915 2323202 -143266086 + AluSx SINE Alu 23 308 -4 21 57 0 0 chr10 2323275 2323310 -143265978 + AT_rich Low_complexity Low_complexity 1 35 0 663 223 54 45 chr10 2324467 2324709 -143264579 + LTR40a LTR ERVL 212 512 -7 592 255 74 10 chr10 2325931 2326176 -143263112 - MIR SINE MIR 0 262 3 21 0 0 0 chr10 2326827 2326848 -143262440 + AT_rich Low_complexity Low_complexity 1 21 0 2230 108 0 0 chr10 2328525 2328813 -143260475 - AluSx SINE Alu -24 288 1 207 257 239 0 chr10 2328871 2328980 -143260308 - MIR SINE MIR -46 216 82 203 367 73 0 chr10 2329303 2329412 -143259876 - MIR SINE MIR -111 151 35 22 109 0 0 chr10 2330125 2330217 -143259071 + AT_rich Low_complexity Low_complexity 1 92 0 715 261 30 0 chr10 2330372 2330571 -143258717 - L1MC3 LINE L1 -21 7764 7560 3779 160 34 9 chr10 2330582 2331256 -143258032 + MER50 LTR ERV1 12 702 -32 2249 243 57 16 chr10 2331266 2331953 -143257335 - L1MC3 LINE L1 -221 7564 6850 317 222 10 0 chr10 2332002 2332101 -143257187 + (TG)n Simple_repeat Simple_repeat 1 100 0 1680 231 110 27 chr10 2332101 2332664 -143256624 - L1MC3 LINE L1 -928 6857 6248 3570 113 21 25 chr10 2333441 2333999 -143255289 + MER4B LTR ERV1 1 556 -54 286 77 0 0 chr10 2333995 2334034 -143255254 + Alu SINE Alu 13 51 -252 * 486 211 0 46 chr10 2334048 2334157 -143255131 - LTR62 LTR ERVK -610 109 6 1434 215 95 50 chr10 2334825 2335290 -143253998 - MER66B LTR ERV1 0 486 1 1512 130 65 0 chr10 2335784 2336000 -143253288 - MER30 DNA MER1_type 0 230 1 23 33 0 0 chr10 2337480 2337510 -143251778 + AT_rich Low_complexity Low_complexity 1 30 0 236 321 131 0 chr10 2337518 2337655 -143251633 + L1M4 LINE L1 3731 3885 -2261 252 0 0 0 chr10 2338010 2338038 -143251250 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 433 244 0 0 chr10 2338316 2338402 -143250886 - U6 snRNA snRNA -19 88 3 606 239 100 13 chr10 2338404 2338634 -143250654 + MLT2D LTR ERVL 100 349 -65 575 138 54 6 chr10 2338648 2338815 -143250473 + (TCTA)n Simple_repeat Simple_repeat 1 175 0 376 163 72 0 chr10 2338882 2339048 -143250240 + (TCTA)n Simple_repeat Simple_repeat 1 178 0 509 123 71 0 chr10 2339092 2339247 -143250041 + (TCTA)n Simple_repeat Simple_repeat 1 166 0 633 121 55 0 chr10 2339317 2339482 -143249806 + (TCTA)n Simple_repeat Simple_repeat 1 174 0 2125 135 0 0 chr10 2340341 2340652 -143248636 + AluSx SINE Alu 1 311 -1 1298 247 34 29 chr10 2340689 2341069 -143248219 - MLT1B LTR MaLR -8 382 1 362 285 125 0 chr10 2342133 2342277 -143247011 + LTR16C LTR ERVL 88 249 -242 323 259 74 53 chr10 2342282 2342471 -143246817 + L1ME3A LINE L1 5965 6157 -13 21 0 0 0 chr10 2342472 2342493 -143246795 + AT_rich Low_complexity Low_complexity 1 21 0 2804 115 0 0 chr10 2343409 2343773 -143245515 - THE1B LTR MaLR 0 364 1 25 0 0 0 chr10 2344006 2344031 -143245257 + AT_rich Low_complexity Low_complexity 1 25 0 2105 127 7 0 chr10 2345162 2345462 -143243826 - AluSx SINE Alu -10 302 1 2374 79 0 3 chr10 2346285 2346590 -143242698 - AluY SINE Alu -7 304 1 226 163 0 20 chr10 2346754 2346803 -143242485 + A-rich Low_complexity Low_complexity 1 48 0 22 0 0 0 chr10 2347510 2347532 -143241756 + AT_rich Low_complexity Low_complexity 1 22 0 2136 136 101 20 chr10 2347747 2348143 -143241145 + MSTA LTR MaLR 1 428 0 441 281 60 27 chr10 2348606 2348909 -143240379 - MLT1I LTR MaLR -27 382 76 232 171 57 0 chr10 2348978 2349048 -143240240 + C-rich Low_complexity Low_complexity 3 76 0 23 0 0 0 chr10 2350655 2350678 -143238610 + AT_rich Low_complexity Low_complexity 1 23 0 273 75 0 0 chr10 2350811 2350851 -143238437 + (TG)n Simple_repeat Simple_repeat 1 40 0 453 289 102 49 chr10 2350950 2351121 -143238167 - HAL1b LINE L1 -224 1124 964 1577 199 13 13 chr10 2351121 2351432 -143237856 + AluJb SINE Alu 1 311 -1 453 289 102 49 chr10 2351432 2351934 -143237354 - HAL1b LINE L1 -384 964 415 1394 45 0 6 chr10 2352034 2352213 -143237075 + (GAA)n Simple_repeat Simple_repeat 2 179 0 1427 190 16 57 chr10 2352213 2352581 -143236707 - MLT1B LTR MaLR -37 353 1 204 236 34 34 chr10 2353093 2353182 -143236106 + T-rich Low_complexity Low_complexity 2 90 0 22 35 0 0 chr10 2353722 2353751 -143235537 + AT_rich Low_complexity Low_complexity 1 29 0 198 71 0 0 chr10 2354525 2354553 -143234735 + (CA)n Simple_repeat Simple_repeat 2 29 0 244 247 82 103 chr10 2354786 2355078 -143234210 - MLT1H LTR MaLR -214 335 50 1817 194 26 11 chr10 2356974 2357356 -143231932 + MLT1B LTR MaLR 3 390 0 815 137 0 23 chr10 2357499 2357630 -143231658 + FLAM_C SINE Alu 5 132 -11 188 275 110 28 chr10 2358621 2358730 -143230558 - MIR SINE MIR 0 262 145 308 333 111 28 chr10 2358741 2358993 -143230295 - HAL1 LINE L1 -1003 1504 1232 692 220 0 0 chr10 2361762 2361903 -143227385 + FLAM_C SINE Alu 3 143 0 1624 40 0 0 chr10 2361985 2362183 -143227105 + L1PA2 LINE L1 5958 6155 0 279 0 0 0 chr10 2362434 2362465 -143226823 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 189 0 0 0 chr10 2362816 2362837 -143226451 + (TTAA)n Simple_repeat Simple_repeat 4 24 0 1231 118 0 0 chr10 2363461 2363630 -143225658 + AluSg/x SINE Alu 131 299 -13 307 341 142 37 chr10 2363952 2364275 -143225013 + HAL1 LINE L1 1414 1770 -737 2421 81 0 3 chr10 2364960 2365268 -143224020 + AluY SINE Alu 1 307 -4 1479 291 97 15 chr10 2365509 2366357 -143222931 + L1M4b LINE L1 44 960 -5899 419 250 23 0 chr10 2366351 2366483 -143222805 - L1M4 LINE L1 -4853 1689 1555 * 228 185 0 19 chr10 2366503 2366557 -143222731 + (TA)n Simple_repeat Simple_repeat 2 54 0 482 97 97 0 chr10 2368146 2368239 -143221049 + L1MA4A LINE L1 6197 6298 -5 2091 99 0 3 chr10 2368492 2368822 -143220466 + AluY SINE Alu 1 329 0 185 340 10 30 chr10 2368822 2368922 -143220366 - MIR SINE MIR -1 261 164 22 0 0 0 chr10 2368934 2368956 -143220332 + AT_rich Low_complexity Low_complexity 1 22 0 291 204 44 26 chr10 2369374 2369487 -143219801 + L1M4 LINE L1 4324 4438 -1708 1965 147 10 6 chr10 2369704 2370016 -143219272 - AluSq SINE Alu 0 313 1 609 266 83 63 chr10 2370018 2370367 -143218921 - L1MEc LINE L1 -4183 2213 1858 186 43 0 0 chr10 2370544 2370567 -143218721 + (CTTG)n Simple_repeat Simple_repeat 1 23 0 1100 191 0 59 chr10 2370675 2370911 -143218377 - AluJb SINE Alu 0 312 91 2188 131 48 14 chr10 2370986 2371338 -143217950 + THE1B LTR MaLR 1 364 0 9992 110 20 18 chr10 2371338 2372907 -143216381 + THE1B-int LTR MaLR 1 1572 -8 2163 124 48 28 chr10 2372914 2373269 -143216019 + THE1B LTR MaLR 1 362 -2 213 154 0 0 chr10 2373330 2373369 -143215919 + CT-rich Low_complexity Low_complexity 2 40 0 23 54 0 0 chr10 2373403 2373440 -143215848 + AT_rich Low_complexity Low_complexity 1 37 0 24 0 0 0 chr10 2373500 2373524 -143215764 + AT_rich Low_complexity Low_complexity 1 24 0 1863 148 33 7 chr10 2373793 2374096 -143215192 - AluSx SINE Alu -1 311 1 239 273 15 0 chr10 2374230 2374296 -143214992 + LTR50 LTR ERVL 403 469 -326 25 31 0 0 chr10 2374673 2374705 -143214583 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr10 2374760 2374783 -143214505 + AT_rich Low_complexity Low_complexity 1 23 0 219 36 0 0 chr10 2374806 2374834 -143214454 + (TTA)n Simple_repeat Simple_repeat 2 29 0 206 105 26 0 chr10 2375137 2375175 -143214113 + (CA)n Simple_repeat Simple_repeat 2 40 0 24 32 0 0 chr10 2375562 2375593 -143213695 + AT_rich Low_complexity Low_complexity 1 31 0 1928 160 3 6 chr10 2375772 2376084 -143213204 - AluSx SINE Alu -1 311 1 255 147 0 73 chr10 2377827 2377895 -143211393 + (TTTA)n Simple_repeat Simple_repeat 2 64 0 184 299 62 31 chr10 2378417 2378514 -143210774 - MIR SINE MIR -85 177 78 264 352 16 16 chr10 2378777 2378905 -143210383 - MIR SINE MIR -118 144 17 1749 163 36 28 chr10 2379028 2379500 -143209788 - MLT2A2 LTR ERVL -81 461 1 955 222 55 37 chr10 2379794 2380174 -143209114 - L1MA9 LINE L1 -25 6266 5859 190 54 27 27 chr10 2380202 2380239 -143209049 + (TAA)n Simple_repeat Simple_repeat 3 39 0 474 248 0 0 chr10 2380241 2380354 -143208934 + L1M2 LINE L1 5681 5793 -519 225 182 15 30 chr10 2380847 2380913 -143208375 - Charlie5 DNA MER1_type -129 2483 2419 1434 94 0 0 chr10 2380918 2381110 -143208178 + L1PA7 LINE L1 5950 6141 -13 232 241 0 0 chr10 2384486 2384540 -143204748 - MIR SINE MIR -26 236 183 994 270 59 28 chr10 2385077 2385430 -143203858 - L1MB2 LINE L1 -38 6133 5768 675 306 65 7 chr10 2385458 2385733 -143203555 - L2 LINE L2 -1005 2309 2019 225 0 100 0 chr10 2388527 2388567 -143200721 + T-rich Low_complexity Low_complexity 2 45 0 21 57 0 0 chr10 2388862 2388897 -143200391 + AT_rich Low_complexity Low_complexity 1 35 0 258 259 86 25 chr10 2389616 2389778 -143199510 - L1MB2 LINE L1 -1501 4645 4474 201 133 0 0 chr10 2389903 2389933 -143199355 + (TC)n Simple_repeat Simple_repeat 1 30 0 2043 81 11 0 chr10 2390464 2390725 -143198563 + AluSq SINE Alu 1 264 -49 352 257 71 0 chr10 2391030 2391170 -143198118 - L1MB2 LINE L1 -2222 3924 3775 434 261 62 26 chr10 2391870 2392065 -143197223 + MER3 DNA MER1_type 1 202 -7 22 0 0 0 chr10 2392254 2392276 -143197012 + AT_rich Low_complexity Low_complexity 1 22 0 2332 106 3 0 chr10 2394224 2394526 -143194762 + AluSx SINE Alu 1 303 -9 21 36 0 0 chr10 2397108 2397136 -143192152 + AT_rich Low_complexity Low_complexity 1 28 0 902 186 0 0 chr10 2397170 2397331 -143191957 + MER2 DNA MER2_type 3 163 -182 268 74 0 37 chr10 2399049 2399066 -143190222 + (TA)n Simple_repeat Simple_repeat 1 17 -35 189 0 0 0 chr10 2399066 2399087 -143190201 + (GA)n Simple_repeat Simple_repeat 2 22 0 268 74 0 37 chr10 2399087 2399123 -143190165 + (TA)n Simple_repeat Simple_repeat 17 52 0 365 202 0 64 chr10 2399161 2399255 -143190033 + L1MC4 LINE L1 6616 6703 -1339 243 0 0 0 chr10 2399263 2399290 -143189998 + (GA)n Simple_repeat Simple_repeat 2 28 0 240 100 0 0 chr10 2399347 2399387 -143189901 + (TA)n Simple_repeat Simple_repeat 1 40 0 256 307 20 0 chr10 2399619 2399720 -143189568 + L1ME LINE L1 5735 5837 -333 508 103 0 13 chr10 2399768 2399846 -143189442 + MADE1 DNA Mariner 4 80 0 378 0 0 0 chr10 2399847 2399889 -143189399 + (TAGA)n Simple_repeat Simple_repeat 4 45 0 314 239 9 0 chr10 2400523 2400632 -143188656 + (TA)n Simple_repeat Simple_repeat 1 110 0 400 333 16 58 chr10 2400697 2400980 -143188308 - L1MEd LINE L1 -4992 1078 784 305 277 27 54 chr10 2401422 2401534 -143187754 - L1MEd LINE L1 -5887 183 75 2487 81 7 0 chr10 2402112 2402420 -143186868 + AluY SINE Alu 2 311 0 302 313 21 0 chr10 2403750 2403846 -143185442 + L1ME LINE L1 5735 5832 -338 313 261 0 43 chr10 2403875 2404063 -143185225 + (TA)n Simple_repeat Simple_repeat 1 180 0 267 156 0 0 chr10 2404078 2404123 -143185165 - MSTA LTR MaLR -383 45 1 240 318 0 0 chr10 2404395 2404458 -143184830 + L2 LINE L2 2729 2791 -523 1399 165 81 0 chr10 2405345 2405581 -143183707 + AluJb SINE Alu 40 294 -18 2785 19 0 6 chr10 2405716 2406027 -143183261 + AluY SINE Alu 1 309 -2 1126 268 79 63 chr10 2407342 2408005 -143181283 - L1ME1 LINE L1 -3 6232 5524 2022 95 15 0 chr10 2408005 2408278 -143181010 - AluSp SINE Alu -35 278 2 1126 268 79 63 chr10 2408278 2408762 -143180526 - L1ME1 LINE L1 -711 5524 5049 979 316 57 35 chr10 2408793 2409380 -143179908 - L1ME1 LINE L1 -5415 981 365 1432 157 70 76 chr10 2409380 2409724 -143179564 + MER61A LTR ERV1 1 342 -1 979 316 57 35 chr10 2409724 2410054 -143179234 - L1ME1 LINE L1 -6031 365 44 30 0 0 0 chr10 2410602 2410632 -143178656 + AT_rich Low_complexity Low_complexity 1 30 0 192 111 0 0 chr10 2410659 2410695 -143178593 + (A)n Simple_repeat Simple_repeat 1 36 0 1227 179 10 5 chr10 2410964 2411171 -143178117 + AluJb SINE Alu 59 266 -46 186 209 0 0 chr10 2412294 2412337 -143176951 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 500 278 67 0 chr10 2412970 2413164 -143176124 - MER20 DNA MER1_type -7 212 6 447 19 0 0 chr10 2413506 2413558 -143175730 + (CA)n Simple_repeat Simple_repeat 2 53 0 446 170 0 10 chr10 2414760 2414860 -143174428 + (CA)n Simple_repeat Simple_repeat 2 100 0 290 243 100 67 chr10 2415065 2415237 -143174051 + L1MA9 LINE L1 6058 6240 -72 204 40 0 0 chr10 2415237 2415262 -143174026 + (TA)n Simple_repeat Simple_repeat 1 25 0 290 243 100 67 chr10 2415262 2415299 -143173989 + L1MA9 LINE L1 6240 6274 -38 216 0 0 0 chr10 2417242 2417266 -143172022 + (T)n Simple_repeat Simple_repeat 1 24 0 200 293 0 27 chr10 2418707 2418782 -143170506 + (CATATA)n Simple_repeat Simple_repeat 3 75 0 323 322 91 34 chr10 2419210 2419474 -143169814 - L1M4 LINE L1 -1377 4769 4491 199 349 24 0 chr10 2419650 2419733 -143169555 - MIR SINE MIR -103 105 21 321 287 83 26 chr10 2420185 2420415 -143168873 - LTR43 LTR ERV1 -167 435 193 249 218 0 68 chr10 2423672 2423819 -143165469 + (TGG)n Simple_repeat Simple_repeat 2 138 0 365 145 0 58 chr10 2423831 2424003 -143165285 + (TGG)n Simple_repeat Simple_repeat 2 163 0 377 275 41 35 chr10 2425698 2425869 -143163419 + MIR SINE MIR 81 252 -10 21 36 0 0 chr10 2426280 2426308 -143162980 + AT_rich Low_complexity Low_complexity 1 28 0 414 302 122 12 chr10 2426754 2426999 -143162289 + MER69 DNA AcHobo 25 296 -2230 988 266 128 38 chr10 2427156 2427821 -143161467 - MER50 LTR ERV1 0 734 10 581 265 160 19 chr10 2428008 2428427 -143160861 + MER69 DNA AcHobo 2049 2526 0 712 228 106 5 chr10 2428490 2428679 -143160609 + MER58A DNA MER1_type 2 209 -15 25 31 0 0 chr10 2429257 2429289 -143159999 + AT_rich Low_complexity Low_complexity 1 32 0 3563 84 18 2 chr10 2430487 2430987 -143158301 - MER41A LTR ERV1 -46 508 1 2201 127 0 6 chr10 2431778 2432093 -143157195 + AluSq SINE Alu 1 313 0 380 250 0 46 chr10 2432449 2432557 -143156731 - MIR SINE MIR 0 262 160 2384 134 10 63 chr10 2432562 2433041 -143156247 + MER4D LTR ERV1 1 454 -418 1170 54 0 0 chr10 2433051 2433198 -143156090 - L1PA4 LINE L1 -3 6152 6006 1824 163 3 3 chr10 2433645 2433966 -143155322 - AluSx SINE Alu 0 312 1 2527 128 49 2 chr10 2434117 2434525 -143154763 - MSTA LTR MaLR -1 427 1 1054 249 92 12 chr10 2435256 2435682 -143153606 - MLT1C LTR MaLR -7 460 1 1292 213 66 3 chr10 2436248 2436568 -143152720 + MLT1B LTR MaLR 7 346 -44 325 217 0 0 chr10 2436572 2436641 -143152647 + MLT1B LTR MaLR 315 383 -7 629 155 17 17 chr10 2436919 2437035 -143152253 + FLAM_C SINE Alu 1 116 -17 207 0 0 0 chr10 2437051 2437074 -143152214 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 459 0 0 0 chr10 2437076 2437127 -143152161 + (TA)n Simple_repeat Simple_repeat 1 51 0 211 244 0 0 chr10 2437130 2437171 -143152117 + MIR SINE MIR 113 153 -109 852 140 110 0 chr10 2437836 2438038 -143151250 - AluSg/x SINE Alu 0 347 131 352 259 28 61 chr10 2439749 2439961 -143149327 + MER46C DNA MER2_type 1 205 -133 693 133 18 0 chr10 2440088 2440201 -143149087 + AluSg/x SINE Alu 192 306 -6 449 182 10 0 chr10 2440349 2440448 -143148840 + (CATATA)n Simple_repeat Simple_repeat 6 105 0 344 276 23 0 chr10 2440448 2440535 -143148753 + L1MC4 LINE L1 6614 6702 -1340 207 182 0 0 chr10 2440536 2440569 -143148719 + (CATATA)n Simple_repeat Simple_repeat 6 38 0 1137 128 0 0 chr10 2440569 2440749 -143148539 + (TA)n Simple_repeat Simple_repeat 1 180 0 31 99 0 0 chr10 2440890 2440991 -143148297 + AT_rich Low_complexity Low_complexity 1 101 0 843 290 153 17 chr10 2441349 2442121 -143147167 + L1ME3A LINE L1 5294 6170 0 763 308 47 18 chr10 2446075 2446527 -143142761 - L1ME3A LINE L1 -214 6374 5910 503 283 72 33 chr10 2446771 2447075 -143142213 - L1ME3A LINE L1 -913 5651 5336 1567 270 21 22 chr10 2447176 2447806 -143141482 + L1MC/D LINE L1 4024 4652 -1494 1403 164 9 4 chr10 2447814 2448045 -143141243 - AluSg/x SINE Alu -10 300 69 980 187 108 0 chr10 2448053 2448287 -143141001 - L1MA4A LINE L1 -134 6169 5912 * 2081 221 43 37 chr10 2448268 2449384 -143139904 + L1MC/D LINE L1 4645 5773 -571 1027 277 52 13 chr10 2449384 2449843 -143139445 - L1ME3A LINE L1 -3058 3506 3030 421 256 62 43 chr10 2449856 2450052 -143139236 - L1MCa LINE L1 -5882 343 17 367 255 168 0 chr10 2450135 2450296 -143138992 - L1MCa LINE L1 -3965 2461 2274 835 171 0 11 chr10 2450486 2450661 -143138627 + GA-rich Low_complexity Low_complexity 4 176 0 1537 231 66 52 chr10 2450970 2451572 -143137716 + L1MC4 LINE L1 7426 8036 -6 270 0 0 0 chr10 2451969 2451999 -143137289 + (T)n Simple_repeat Simple_repeat 1 30 0 317 193 114 57 chr10 2452846 2452934 -143136354 + MIR SINE MIR 20 112 -150 23 68 0 0 chr10 2452984 2453028 -143136260 + AT_rich Low_complexity Low_complexity 1 44 0 2741 23 0 0 chr10 2453952 2454260 -143135028 - AluYa5 SINE Alu -3 308 1 407 280 47 62 chr10 2454289 2454564 -143134724 + L1M4 LINE L1 4341 4611 -1535 342 67 0 0 chr10 2456126 2456171 -143133117 + (TG)n Simple_repeat Simple_repeat 2 46 0 257 175 10 52 chr10 2456561 2456658 -143132630 + (TATATG)n Simple_repeat Simple_repeat 2 94 0 315 248 44 83 chr10 2456975 2457110 -143132178 + MLT2C1 LTR ERVL 269 334 -63 2208 92 3 35 chr10 2457110 2457426 -143131862 - AluSx SINE Alu -6 306 1 315 248 44 83 chr10 2457426 2457488 -143131800 + MLT2C1 LTR ERVL 334 397 0 2224 123 0 0 chr10 2458076 2458386 -143130902 + AluSg SINE Alu 1 310 0 195 100 0 0 chr10 2458419 2458449 -143130839 + (CAAAA)n Simple_repeat Simple_repeat 3 32 0 204 346 88 11 chr10 2459078 2459260 -143130028 + L2 LINE L2 2196 2391 -923 214 337 45 0 chr10 2459579 2459668 -143129620 + MIR3 SINE MIR 96 188 -20 21 0 0 0 chr10 2460265 2460286 -143129002 + AT_rich Low_complexity Low_complexity 1 21 0 203 167 0 28 chr10 2460332 2460404 -143128884 + (TTATA)n Simple_repeat Simple_repeat 5 74 0 288 238 46 13 chr10 2460407 2460558 -143128730 + (TA)n Simple_repeat Simple_repeat 2 157 0 2070 99 7 7 chr10 2460687 2460969 -143128319 + AluSx SINE Alu 3 284 -28 1065 201 36 12 chr10 2461417 2461666 -143127622 - L1MB1 LINE L1 0 6168 5914 26 0 0 0 chr10 2464634 2464660 -143124628 + AT_rich Low_complexity Low_complexity 1 26 0 1493 161 8 0 chr10 2465718 2465954 -143123334 + AluJo SINE Alu 35 272 -40 207 0 0 0 chr10 2465970 2465993 -143123295 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1634 115 0 0 chr10 2466155 2466373 -143122915 - AluSx SINE Alu -94 218 1 903 219 87 64 chr10 2466374 2466767 -143122521 + L1MDa LINE L1 1453 1854 -4686 851 167 13 8 chr10 2466896 2467136 -143122152 + CT-rich Low_complexity Low_complexity 1 241 0 2414 290 23 14 chr10 2467692 2468805 -143120483 - L1ME1 LINE L1 -5 6161 5039 1186 257 22 4 chr10 2468808 2469139 -143120149 - MER33 DNA MER1_type 0 324 1 1830 248 63 84 chr10 2469139 2470309 -143118979 - L1ME1 LINE L1 -1116 5030 3900 231 274 12 24 chr10 2470593 2470677 -143118611 + GA-rich Low_complexity Low_complexity 1 83 0 360 324 42 9 chr10 2470921 2471137 -143118151 - MIR SINE MIR -32 230 8 248 298 9 18 chr10 2471830 2471944 -143117344 + L1ME4a LINE L1 5944 6056 -65 342 0 0 0 chr10 2473804 2473842 -143115446 + (CA)n Simple_repeat Simple_repeat 2 39 0 453 161 0 0 chr10 2474298 2474385 -143114903 + (CA)n Simple_repeat Simple_repeat 2 88 0 374 38 0 19 chr10 2476306 2476359 -143112929 + (CA)n Simple_repeat Simple_repeat 1 52 0 21 36 0 0 chr10 2476628 2476656 -143112632 + AT_rich Low_complexity Low_complexity 1 28 0 229 281 22 11 chr10 2477397 2477486 -143111802 - L1ME LINE L1 -491 5630 5541 611 288 124 19 chr10 2477895 2478436 -143110852 - L1ME1 LINE L1 -2260 3886 3289 489 329 39 19 chr10 2478466 2478776 -143110512 - L1ME1 LINE L1 -3461 2685 2370 2457 249 33 12 chr10 2478962 2479654 -143109634 - L1MC3 LINE L1 0 7785 7079 1319 241 68 29 chr10 2479660 2480075 -143109213 - L1MC3 LINE L1 -937 6848 6418 1516 166 3 66 chr10 2480088 2480377 -143108911 + AluJo SINE Alu 11 281 -31 25 75 0 0 chr10 2480514 2480567 -143108721 + AT_rich Low_complexity Low_complexity 1 53 0 21 0 0 0 chr10 2480623 2480644 -143108644 + AT_rich Low_complexity Low_complexity 1 21 0 1101 222 66 26 chr10 2481337 2481695 -143107593 - MLT2D LTR ERVL -94 426 1 547 103 0 0 chr10 2481745 2481823 -143107465 + MADE1 DNA Mariner 1 78 -2 2085 132 0 0 chr10 2482961 2483256 -143106032 - AluSq SINE Alu -18 295 1 525 283 0 0 chr10 2483828 2483973 -143105315 - MIR SINE MIR -36 226 82 2010 144 38 123 chr10 2484127 2484600 -143104688 - Tigger2 DNA MER2_type 0 2718 2 318 313 23 16 chr10 2485031 2485159 -143104129 - MIR SINE MIR -133 129 1 1486 251 45 35 chr10 2486270 2486863 -143102425 + L1MDa LINE L1 1820 2418 -4122 1429 137 0 0 chr10 2487011 2487216 -143102072 - AluSx SINE Alu -107 205 1 1519 166 13 42 chr10 2487796 2487911 -143101377 + AluJo SINE Alu 2 119 -193 468 0 0 0 chr10 2487911 2487963 -143101325 + (CA)n Simple_repeat Simple_repeat 1 52 0 1519 166 13 42 chr10 2487963 2488154 -143101134 + AluJo SINE Alu 119 299 -13 23 0 0 0 chr10 2488154 2488177 -143101111 + AT_rich Low_complexity Low_complexity 1 23 0 183 139 0 0 chr10 2488805 2488841 -143100447 + (T)n Simple_repeat Simple_repeat 1 36 0 398 289 37 44 chr10 2489020 2489293 -143099995 + LTR37B LTR ERV1 198 468 0 182 231 39 39 chr10 2489999 2490051 -143099237 - MIR3 SINE MIR -7 201 150 683 206 25 0 chr10 2490066 2490226 -143099062 + L1MCa LINE L1 1769 1932 -4494 2355 97 3 0 chr10 2490255 2490565 -143098723 + AluSq SINE Alu 1 311 -2 319 276 140 7 chr10 2490635 2491064 -143098224 + MLT1E3 LTR MaLR 25 513 -111 565 160 14 83 chr10 2491352 2491496 -143097792 - L1M LINE L1 -775 5393 5260 230 331 60 60 chr10 2491541 2491692 -143097596 - L2 LINE L2 -39 3233 3083 228 399 114 0 chr10 2491900 2492093 -143097195 - L2 LINE L2 -549 2765 2551 180 313 0 16 chr10 2492204 2492268 -143097020 - MIR SINE MIR -2 260 198 6854 255 48 48 chr10 2492689 2496122 -143093166 - L1MEc LINE L1 -973 5671 2271 301 189 42 63 chr10 2496228 2496323 -143092965 - L1MEc LINE L1 -5568 974 882 648 312 56 37 chr10 2496404 2496865 -143092423 - L1MEc LINE L1 -5673 869 400 28 0 0 0 chr10 2498040 2498068 -143091220 + AT_rich Low_complexity Low_complexity 1 28 0 1388 226 76 21 chr10 2498271 2499087 -143090201 - L1MC3 LINE L1 -16 7769 7000 234 91 0 0 chr10 2499087 2499120 -143090168 + (TG)n Simple_repeat Simple_repeat 2 34 0 1388 226 76 21 chr10 2499120 2500849 -143088439 - L1MC3 LINE L1 -785 7000 5083 356 134 30 15 chr10 2500990 2501057 -143088231 + MADE1 DNA Mariner 1 68 -12 263 349 40 0 chr10 2501428 2501554 -143087734 + LTR16A LTR ERVL 298 428 -22 2196 116 0 3 chr10 2501554 2501865 -143087423 - AluSx SINE Alu -2 310 1 209 335 55 55 chr10 2504150 2504314 -143084974 - MIR SINE MIR -98 164 1 208 323 46 39 chr10 2505147 2505277 -143084011 - L2 LINE L2 -10 3303 3173 462 232 30 84 chr10 2506536 2506739 -143082549 + L1MA9 LINE L1 6099 6290 -1 348 24 0 0 chr10 2507666 2507707 -143081581 + (TG)n Simple_repeat Simple_repeat 1 41 0 256 330 58 111 chr10 2507820 2507977 -143081311 + L2 LINE L2 1764 1928 -1386 2619 116 28 0 chr10 2507977 2508331 -143080957 - THE1B LTR MaLR 0 364 1 256 330 58 111 chr10 2508331 2508707 -143080581 + L2 LINE L2 1928 2269 -1045 189 0 0 0 chr10 2510021 2510042 -143079246 + (TTCTG)n Simple_repeat Simple_repeat 2 22 0 743 89 0 89 chr10 2511666 2511789 -143077499 - MER57B LTR ERV1 0 434 323 1598 237 73 35 chr10 2511897 2511977 -143077311 - L1MD2 LINE L1 -10 6418 6342 2153 119 10 3 chr10 2511977 2512287 -143077001 - AluSq SINE Alu -1 312 1 1598 237 73 35 chr10 2512287 2513596 -143075692 - L1MD2 LINE L1 -86 6342 4909 1687 253 79 35 chr10 2513744 2513843 -143075445 - L1ME1 LINE L1 -15 6151 6058 1477 155 43 69 chr10 2513843 2514147 -143075141 + AluJo SINE Alu 1 296 -16 1687 253 79 35 chr10 2514147 2514683 -143074605 - L1ME1 LINE L1 -108 6058 5488 266 247 155 10 chr10 2514689 2514786 -143074502 - L1MD2 LINE L1 -6251 145 35 587 319 114 23 chr10 2514994 2515564 -143073724 + L2 LINE L2 2454 3076 -237 186 136 34 17 chr10 2515986 2516045 -143073243 + (TA)n Simple_repeat Simple_repeat 1 60 0 236 217 36 42 chr10 2516047 2516213 -143073075 + (TTATA)n Simple_repeat Simple_repeat 4 168 0 25 31 0 0 chr10 2516213 2516245 -143073043 + AT_rich Low_complexity Low_complexity 1 32 0 1100 245 62 28 chr10 2516924 2517058 -143072230 + MLT1C LTR MaLR 53 181 -286 2225 117 7 0 chr10 2517058 2517365 -143071923 + AluSp SINE Alu 1 309 -4 1100 245 62 28 chr10 2517365 2517630 -143071658 + MLT1C LTR MaLR 181 466 -1 22 0 0 0 chr10 2518217 2518239 -143071049 + AT_rich Low_complexity Low_complexity 1 22 0 210 37 0 0 chr10 2518989 2519016 -143070272 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1580 107 0 5 chr10 2519019 2519234 -143070054 - AluSg/x SINE Alu -22 290 77 887 235 59 56 chr10 2519340 2519663 -143069625 + MER33 DNA MER1_type 1 324 0 211 379 137 5 chr10 2519803 2520014 -143069274 - MIR SINE MIR -19 243 5 2161 103 40 7 chr10 2523178 2523478 -143065810 + AluSx SINE Alu 1 310 -2 327 209 0 0 chr10 2524087 2524197 -143065091 + (CA)n Simple_repeat Simple_repeat 2 111 0 515 216 6 0 chr10 2524226 2524393 -143064895 + (CA)n Simple_repeat Simple_repeat 2 169 0 25 0 0 0 chr10 2524802 2524827 -143064461 + AT_rich Low_complexity Low_complexity 1 25 0 427 195 11 11 chr10 2524833 2524920 -143064368 - AluJ/FRAM SINE Alu -6 306 220 8552 26 0 0 chr10 2524941 2526659 -143062629 - L1PA4 LINE L1 0 6155 4439 342 0 0 0 chr10 2527406 2527444 -143061844 + (TG)n Simple_repeat Simple_repeat 2 39 0 658 254 143 70 chr10 2529231 2529762 -143059526 - MLT1E3 LTR MaLR 0 624 24 2314 96 3 0 chr10 2529832 2530134 -143059154 - AluSq SINE Alu -10 303 1 597 177 73 8 chr10 2530273 2530397 -143058891 + L1MC3 LINE L1 7342 7473 -312 218 167 37 0 chr10 2530407 2530461 -143058827 + (TTATA)n Simple_repeat Simple_repeat 4 59 0 317 161 18 0 chr10 2530468 2530524 -143058764 - L1MC3 LINE L1 -312 7473 7417 381 300 13 21 chr10 2531262 2531620 -143057668 + T-rich Low_complexity Low_complexity 1 482 0 2316 67 3 0 chr10 2533484 2533784 -143055504 + AluY SINE Alu 4 304 -7 239 143 0 18 chr10 2535185 2535241 -143054047 + (TTTTC)n Simple_repeat Simple_repeat 1 55 0 550 0 29 0 chr10 2535916 2535986 -143053302 + (TAGA)n Simple_repeat Simple_repeat 4 75 0 2263 99 0 10 chr10 2536141 2536445 -143052843 - AluSp SINE Alu -12 301 1 244 251 76 58 chr10 2537594 2537765 -143051523 + L1M4 LINE L1 4484 4657 -1489 1272 273 26 0 chr10 2538025 2538370 -143050918 - L1MCb LINE L1 -5078 967 614 362 202 62 70 chr10 2538363 2538492 -143050796 + L1MCb LINE L1 934 1061 -4984 * 1336 153 7 65 chr10 2538484 2538759 -143050529 + L1MC1 LINE L1 5623 5881 -452 32 0 0 0 chr10 2538759 2538791 -143050497 + AT_rich Low_complexity Low_complexity 1 32 0 372 157 47 6 chr10 2538791 2538963 -143050325 + (TA)n Simple_repeat Simple_repeat 2 180 0 2111 131 3 0 chr10 2539734 2540032 -143049256 + AluSx SINE Alu 1 299 -13 286 282 13 0 chr10 2540385 2540463 -143048825 + MER116 DNA Mariner 1 79 -1 31 26 0 0 chr10 2540886 2540924 -143048364 + AT_rich Low_complexity Low_complexity 1 38 0 2038 127 3 29 chr10 2541336 2541650 -143047638 + AluSx SINE Alu 1 306 -6 257 246 0 0 chr10 2541689 2541750 -143047538 + (TAGA)n Simple_repeat Simple_repeat 1 61 0 208 381 41 0 chr10 2542635 2542732 -143046556 + L2 LINE L2 3158 3258 -14 2389 86 3 13 chr10 2542819 2542955 -143046333 + AluSx SINE Alu 1 137 -196 2288 85 7 16 chr10 2542955 2543262 -143046026 + AluY SINE Alu 1 304 -7 2389 86 3 13 chr10 2543262 2543461 -143045827 + AluSx SINE Alu 137 333 0 2189 96 7 10 chr10 2544120 2544412 -143044876 + AluSg SINE Alu 1 291 -19 2507 59 7 0 chr10 2545036 2545343 -143043945 - AluY SINE Alu -2 309 1 520 326 40 50 chr10 2546715 2547168 -143042120 - L1MEc LINE L1 -4574 2548 2105 279 93 0 0 chr10 2547168 2547211 -143042077 + (TG)n Simple_repeat Simple_repeat 2 44 0 520 326 40 50 chr10 2547211 2547531 -143041757 - L1MEc LINE L1 -5017 2105 1783 465 312 87 86 chr10 2547580 2548457 -143040831 - L1MEc LINE L1 -4891 1532 655 798 303 83 5 chr10 2548577 2549000 -143040288 - L1MEc LINE L1 -5949 474 19 1965 143 0 0 chr10 2549217 2549497 -143039791 + AluSx SINE Alu 1 280 -32 390 57 0 0 chr10 2549500 2549553 -143039735 + (CA)n Simple_repeat Simple_repeat 2 54 0 2514 55 0 0 chr10 2550000 2550310 -143038978 - AluY SINE Alu -1 310 1 233 140 18 0 chr10 2550447 2550504 -143038784 + GA-rich Low_complexity Low_complexity 2 59 0 1902 144 4 0 chr10 2551448 2551764 -143037524 + AluSx SINE Alu 6 322 0 21 0 0 0 chr10 2551912 2551933 -143037355 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr10 2553530 2553561 -143035727 + AT_rich Low_complexity Low_complexity 1 31 0 702 202 0 4 chr10 2554601 2554842 -143034446 + GA-rich Low_complexity Low_complexity 1 239 0 246 252 103 47 chr10 2554970 2555077 -143034211 - L2 LINE L2 0 3272 3160 1158 102 36 0 chr10 2555170 2555337 -143033951 + L1PA13 LINE L1 5972 6144 -19 556 321 32 0 chr10 2555706 2555893 -143033395 - MIR SINE MIR -4 258 66 337 255 0 57 chr10 2556958 2557064 -143032224 + L2 LINE L2 2458 2557 -757 1515 97 0 29 chr10 2557075 2557281 -143032007 - AluSq SINE Alu -113 200 1 239 280 32 64 chr10 2557317 2557442 -143031846 + L2 LINE L2 3193 3313 0 24 67 0 0 chr10 2558920 2558965 -143030323 + AT_rich Low_complexity Low_complexity 1 45 0 386 283 53 25 chr10 2560257 2560572 -143028716 - L1MEc LINE L1 -5918 478 91 * 2036 217 46 19 chr10 2560566 2561202 -143028086 - L1M4 LINE L1 -1316 4830 4178 2127 138 0 0 chr10 2562441 2562737 -143026551 + AluSx SINE Alu 3 298 -14 1407 233 43 62 chr10 2563548 2563865 -143025423 + MLT1D LTR MaLR 1 305 -200 370 145 53 26 chr10 2563865 2563941 -143025347 + MADE1 DNA Mariner 3 80 0 1407 233 43 62 chr10 2563941 2564136 -143025152 + MLT1D LTR MaLR 305 502 -3 1017 205 10 0 chr10 2564233 2564428 -143024860 + L1MC3 LINE L1 6666 6862 -923 1322 248 103 15 chr10 2564464 2564919 -143024369 + L1MC3 LINE L1 7282 7776 -9 29 28 0 0 chr10 2564943 2564979 -143024309 + AT_rich Low_complexity Low_complexity 1 36 0 26 0 0 0 chr10 2565152 2565178 -143024110 + AT_rich Low_complexity Low_complexity 1 26 0 437 306 36 16 chr10 2565228 2565421 -143023867 + L1MC5 LINE L1 6995 7191 -770 1924 131 17 17 chr10 2566064 2566361 -143022927 + AluSx SINE Alu 1 297 -15 394 281 82 0 chr10 2567749 2567884 -143021404 - MLT1H LTR MaLR -26 523 378 394 182 0 39 chr10 2567993 2568070 -143021218 - AluS SINE Alu -228 74 1 213 281 11 34 chr10 2568506 2568595 -143020693 - MIR SINE MIR -23 239 153 234 184 0 0 chr10 2569687 2569736 -143019552 + L1ME4a LINE L1 6069 6117 -4 369 298 99 33 chr10 2569961 2570233 -143019055 + MLT1H LTR MaLR 62 351 -198 920 60 0 0 chr10 2573387 2573504 -143015784 + L1PA4 LINE L1 6031 6147 -8 2029 69 0 138 chr10 2573904 2574253 -143015035 + AluY SINE Alu 1 301 -10 289 313 109 16 chr10 2574846 2574974 -143014314 + MIR SINE MIR 12 151 -111 32 43 0 0 chr10 2575881 2575927 -143013361 + AT_rich Low_complexity Low_complexity 1 46 0 329 311 0 0 chr10 2575930 2576020 -143013268 - L1MC4 LINE L1 -1339 6703 6614 316 322 0 0 chr10 2575952 2576042 -143013246 + L1MC4 LINE L1 6614 6703 -1339 * 2319 79 14 0 chr10 2576053 2576343 -143012945 - AluY SINE Alu -17 294 1 22 35 0 0 chr10 2576735 2576764 -143012524 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr10 2576899 2576928 -143012360 + AT_rich Low_complexity Low_complexity 1 29 0 454 259 78 18 chr10 2577261 2577427 -143011861 - MLT1E2 LTR MaLR -11 615 440 486 245 15 67 chr10 2577662 2577880 -143011408 + L1MCa LINE L1 1508 1906 -4701 1594 257 32 20 chr10 2577880 2578526 -143010762 + L1MCa LINE L1 2899 3552 -2874 488 264 110 0 chr10 2578906 2579088 -143010200 + MER5C DNA MER1_type 1 202 -122 205 195 0 0 chr10 2580541 2580582 -143008706 + (TA)n Simple_repeat Simple_repeat 1 41 0 2078 208 41 4 chr10 2581458 2581924 -143007364 + MER66B LTR ERV1 1 483 -3 226 308 19 19 chr10 2581927 2582031 -143007257 + L1MEd LINE L1 324 427 -5692 457 177 37 7 chr10 2582220 2582493 -143006795 + (TA)n Simple_repeat Simple_repeat 1 281 0 337 184 48 0 chr10 2582508 2582676 -143006612 + (TA)n Simple_repeat Simple_repeat 2 177 0 495 155 45 0 chr10 2582700 2583035 -143006253 + (TA)n Simple_repeat Simple_repeat 1 350 0 1858 199 63 22 chr10 2583035 2583493 -143005795 + L1MC2 LINE L1 5859 6335 -9 247 343 38 48 chr10 2583791 2584001 -143005287 + L3 LINE CR1 816 1023 -554 205 344 0 0 chr10 2584082 2584143 -143005145 - MIR SINE MIR -6 256 196 203 363 62 38 chr10 2584596 2584756 -143004532 + MIR SINE MIR 20 183 -79 265 222 0 48 chr10 2585086 2585149 -143004139 + MER4-int LTR ERV1 1112 1171 -5427 2278 110 7 0 chr10 2585898 2586207 -143003081 - AluSx SINE Alu -1 311 1 2026 113 7 7 chr10 2587003 2587287 -143002001 - AluSx SINE Alu -26 286 3 24 32 0 0 chr10 2588237 2588268 -143001020 + AT_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr10 2588292 2588316 -143000972 + AT_rich Low_complexity Low_complexity 1 24 0 205 294 19 88 chr10 2589470 2589630 -142999658 + L2 LINE L2 2906 3054 -218 2440 110 22 0 chr10 2590054 2590410 -142998878 + THE1B LTR MaLR 1 364 0 213 39 0 0 chr10 2592036 2592062 -142997226 + (A)n Simple_repeat Simple_repeat 1 26 0 301 225 0 0 chr10 2592294 2592365 -142996923 - L1ME4a LINE L1 0 6121 6051 2457 48 7 0 chr10 2592926 2593218 -142996070 - AluY SINE Alu -8 303 10 260 338 14 27 chr10 2593700 2593848 -142995440 + L1MCc LINE L1 763 908 -5515 1976 111 18 56 chr10 2594096 2594331 -142994957 + THE1B LTR MaLR 3 223 -141 2160 121 0 3 chr10 2594331 2594629 -142994659 + AluSx SINE Alu 1 297 -15 1976 111 18 56 chr10 2594629 2594734 -142994554 + THE1B LTR MaLR 223 330 -34 669 305 44 29 chr10 2594817 2595229 -142994059 + L1MCc LINE L1 1197 1608 -4887 298 351 15 8 chr10 2595246 2595380 -142993908 + L1M4 LINE L1 4829 4963 -1183 612 283 44 9 chr10 2595386 2595612 -142993676 + L1M4 LINE L1 4004 4237 -1909 789 272 46 14 chr10 2595631 2595977 -142993311 + L1M4 LINE L1 4292 4648 -1498 249 281 66 12 chr10 2598140 2598307 -142990981 + L1MCc LINE L1 523 698 -6243 797 256 34 78 chr10 2598961 2599507 -142989781 + L1MCc LINE L1 1683 2213 -4728 198 0 0 0 chr10 2599973 2599995 -142989293 + (TTTTA)n Simple_repeat Simple_repeat 3 24 0 2153 117 0 7 chr10 2600006 2600304 -142988984 - AluSx SINE Alu -15 297 2 1335 72 0 0 chr10 2600789 2600969 -142988319 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 693 79 26 9 chr10 2600969 2601083 -142988205 + (TTTC)n Simple_repeat Simple_repeat 4 119 0 214 29 57 0 chr10 2601739 2601774 -142987514 + (TA)n Simple_repeat Simple_repeat 1 37 0 281 26 26 0 chr10 2603196 2603234 -142986054 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 243 0 0 0 chr10 2603913 2603940 -142985348 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2649 118 3 0 chr10 2604116 2604490 -142984798 - THE1C LTR MaLR 0 375 1 2354 136 24 2 chr10 2604852 2605263 -142984025 + MSTB1 LTR MaLR 1 420 -12 21 82 0 0 chr10 2605841 2605890 -142983398 + AT_rich Low_complexity Low_complexity 1 49 0 1644 103 45 5 chr10 2606190 2606414 -142982874 + AluSx SINE Alu 60 292 -20 2520 70 0 3 chr10 2607485 2607797 -142981491 - AluY SINE Alu 0 311 1 340 226 50 99 chr10 2607974 2608155 -142981133 + HAL1b LINE L1 634 805 -543 23 54 0 0 chr10 2608607 2608644 -142980644 + AT_rich Low_complexity Low_complexity 1 37 0 2361 265 128 6 chr10 2610215 2611074 -142978214 + L1M4b LINE L1 12 975 -5884 2110 267 56 46 chr10 2611553 2612723 -142976565 + L1M4b LINE L1 1120 2300 -4659 998 109 0 0 chr10 2613113 2613241 -142976047 - AluSq/x SINE Alu -185 128 1 574 287 0 32 chr10 2613304 2613520 -142975768 - MER3 DNA MER1_type 0 209 1 1759 199 17 6 chr10 2613716 2614077 -142975211 - MLT1A1 LTR MaLR 0 365 1 1275 265 23 25 chr10 2614277 2614748 -142974540 - MER110 LTR ERV1 -5 486 17 207 186 0 0 chr10 2615565 2615608 -142973680 + (CATATA)n Simple_repeat Simple_repeat 6 48 0 23 0 0 0 chr10 2615860 2615883 -142973405 + AT_rich Low_complexity Low_complexity 1 23 0 1327 261 57 11 chr10 2616401 2616841 -142972447 - LTR40b LTR ERVL 0 462 3 441 193 205 91 chr10 2617200 2617454 -142971834 + MLT1C LTR MaLR 187 443 -24 367 68 34 0 chr10 2617462 2617521 -142971767 + (TG)n Simple_repeat Simple_repeat 1 61 0 3530 188 33 11 chr10 2618318 2619015 -142970273 - MER44D DNA MER2_type -7 598 15 311 298 26 18 chr10 2619161 2619275 -142970013 + L1MC/D LINE L1 5547 5661 -2147 2115 103 7 33 chr10 2619287 2619589 -142969699 + AluSx SINE Alu 1 294 -18 231 36 0 0 chr10 2619589 2619617 -142969671 + (GGAA)n Simple_repeat Simple_repeat 3 30 0 290 194 0 10 chr10 2620286 2620384 -142968904 + (CA)n Simple_repeat Simple_repeat 1 97 0 22 94 0 0 chr10 2620481 2620545 -142968743 + AT_rich Low_complexity Low_complexity 1 64 0 261 0 0 0 chr10 2620852 2620881 -142968407 + (TG)n Simple_repeat Simple_repeat 2 30 0 315 279 68 26 chr10 2621598 2621788 -142967500 - LTR16B LTR ERVL 0 464 267 274 240 54 0 chr10 2626822 2626951 -142962337 + (CTAG)n Simple_repeat Simple_repeat 3 138 0 2182 55 15 0 chr10 2628430 2628701 -142960587 - AluY SINE Alu -7 304 30 240 301 113 23 chr10 2628760 2628893 -142960395 + MIR SINE MIR 115 259 -3 22 0 0 0 chr10 2631336 2631358 -142957930 + AT_rich Low_complexity Low_complexity 1 22 0 213 39 0 0 chr10 2632821 2632847 -142956441 + (CA)n Simple_repeat Simple_repeat 1 26 0 235 330 9 57 chr10 2633525 2633631 -142955657 - MIR SINE MIR -68 140 40 240 200 0 0 chr10 2634227 2634287 -142955001 + (TA)n Simple_repeat Simple_repeat 1 60 0 566 344 114 14 chr10 2634645 2635003 -142954285 + L2 LINE L2 2920 3313 0 268 309 36 12 chr10 2635094 2635178 -142954110 - L2 LINE L2 -19 3294 3209 813 205 127 72 chr10 2635277 2635623 -142953665 + MLT1A1 LTR MaLR 1 365 0 1585 215 0 0 chr10 2635929 2636213 -142953075 + AluJb SINE Alu 10 293 -19 1279 209 38 62 chr10 2636878 2637251 -142952037 + MLT1A1 LTR MaLR 1 364 -1 25 0 0 0 chr10 2637716 2637741 -142951547 + AT_rich Low_complexity Low_complexity 1 25 0 247 307 162 0 chr10 2638282 2638461 -142950827 - L1ME LINE L1 -300 5864 5657 4484 248 56 53 chr10 2638481 2638861 -142950427 + L1M4 LINE L1 2 379 -6267 2363 129 11 5 chr10 2638861 2639234 -142950054 + THE1C LTR MaLR 1 375 0 4484 248 56 53 chr10 2639234 2640240 -142949048 + L1M4 LINE L1 379 1381 -5265 2321 114 0 0 chr10 2640240 2640546 -142948742 + AluSq SINE Alu 1 306 -7 4484 248 56 53 chr10 2640546 2641648 -142947640 + L1M4 LINE L1 1381 2615 -4031 421 221 60 59 chr10 2641744 2641937 -142947351 - L1ME LINE L1 -683 5479 5288 180 0 0 0 chr10 2641937 2641957 -142947331 + (TA)n Simple_repeat Simple_repeat 2 21 0 2277 80 0 0 chr10 2641957 2642246 -142947042 - AluY SINE Alu -22 289 1 421 221 60 59 chr10 2642246 2642336 -142946952 - L1ME LINE L1 -873 5289 5192 234 0 0 0 chr10 2642385 2642411 -142946877 + (CA)n Simple_repeat Simple_repeat 1 26 0 261 310 133 22 chr10 2642438 2642664 -142946624 + L1MC/D LINE L1 377 627 -5443 267 313 0 0 chr10 2642837 2642933 -142946355 + HsTC2 DNA Tc2 1802 1897 -1 206 323 16 0 chr10 2644861 2644923 -142944365 + C-rich Low_complexity Low_complexity 5 67 0 348 354 50 0 chr10 2645018 2645179 -142944109 - MIR SINE MIR -74 188 20 309 197 61 0 chr10 2645207 2645273 -142944015 - FRAM/FAM SINE Alu -90 85 16 261 83 0 0 chr10 2695547 2695583 -142893705 + (TG)n Simple_repeat Simple_repeat 2 37 0 1708 245 51 22 chr10 2695646 2696312 -142892976 + L1MC/D LINE L1 3742 4426 -1654 1561 230 91 16 chr10 2696304 2696979 -142892309 + L1MC/D LINE L1 5016 5741 -435 * 213 313 48 36 chr10 2697110 2697193 -142892095 + L2 LINE L2 3146 3229 -43 225 240 0 0 chr10 2697351 2697426 -142891862 + (TA)n Simple_repeat Simple_repeat 1 75 0 659 126 14 28 chr10 2698103 2698246 -142891042 + GA-rich Low_complexity Low_complexity 4 144 0 517 260 120 67 chr10 2700705 2701121 -142888167 - MLT1H LTR MaLR -46 503 66 22 35 0 0 chr10 2702997 2703026 -142886262 + AT_rich Low_complexity Low_complexity 1 29 0 25 31 0 0 chr10 2704119 2704151 -142885137 + AT_rich Low_complexity Low_complexity 1 32 0 1861 193 75 2 chr10 2704156 2704555 -142884733 + MSTA LTR MaLR 1 428 0 23 33 0 0 chr10 2705091 2705121 -142884167 + AT_rich Low_complexity Low_complexity 1 30 0 1751 179 26 13 chr10 2705138 2705446 -142883842 + AluJo SINE Alu 1 312 0 2193 201 47 43 chr10 2705687 2706200 -142883088 - LTR40a LTR ERVL 0 519 5 1945 139 3 3 chr10 2706247 2706542 -142882746 - AluSx SINE Alu -17 295 1 299 304 13 0 chr10 2706549 2706628 -142882660 - L2 LINE L2 -17 3255 3176 264 350 53 0 chr10 2707888 2708094 -142881194 - LTR33 LTR ERVL 0 521 305 237 239 33 54 chr10 2708726 2708818 -142880470 - MER5B DNA MER1_type -12 166 77 1414 150 24 8 chr10 2709925 2710172 -142879116 + L1MA4 LINE L1 6042 6292 -8 21 36 0 0 chr10 2710711 2710739 -142878549 + AT_rich Low_complexity Low_complexity 1 28 0 5464 102 11 7 chr10 2712328 2713126 -142876162 - L1PA14 LINE L1 -123 6038 5237 1492 160 29 64 chr10 2714053 2714236 -142875052 - AluJb SINE Alu -10 302 133 2259 111 3 13 chr10 2714236 2714551 -142874737 - AluSx SINE Alu 0 312 1 1492 160 29 64 chr10 2714551 2714680 -142874608 - AluJb SINE Alu -179 133 1 200 244 90 13 chr10 2714964 2715042 -142874246 + MIR3 SINE MIR 121 204 -4 478 239 26 0 chr10 2715271 2715388 -142873900 + MER58B DNA MER1_type 222 341 0 407 351 52 0 chr10 2715579 2715753 -142873535 + MIR SINE MIR 74 256 -6 216 0 0 0 chr10 2715764 2715788 -142873500 + (CA)n Simple_repeat Simple_repeat 2 25 0 801 185 0 0 chr10 2717271 2717449 -142871839 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 733 317 16 12 chr10 2718037 2718280 -142871008 - MIR SINE MIR -3 259 16 230 227 41 21 chr10 2718380 2718477 -142870811 + (TA)n Simple_repeat Simple_repeat 1 99 0 255 31 0 0 chr10 2718618 2718650 -142870638 + (A)n Simple_repeat Simple_repeat 1 32 0 216 217 17 17 chr10 2720147 2720207 -142869081 + (CA)n Simple_repeat Simple_repeat 1 60 0 1848 141 0 0 chr10 2720712 2720974 -142868314 + AluSx SINE Alu 46 307 -5 183 80 0 0 chr10 2720999 2721024 -142868264 + (CAA)n Simple_repeat Simple_repeat 1 25 0 2776 96 8 11 chr10 2723515 2723880 -142865408 - THE1B LTR MaLR 0 364 1 207 319 29 0 chr10 2724061 2724130 -142865158 + MIR SINE MIR 56 126 -136 30 27 0 0 chr10 2725015 2725052 -142864236 + AT_rich Low_complexity Low_complexity 1 37 0 222 313 36 12 chr10 2726233 2726316 -142862972 + MIR3 SINE MIR 15 99 -109 264 358 80 0 chr10 2727507 2727658 -142861630 + HERV16 LTR ERVL 1412 1574 -3422 1448 343 48 50 chr10 2727804 2728788 -142860500 + HERV16 LTR ERVL 2380 3091 -1905 189 180 0 0 chr10 2729449 2729499 -142859789 + A-rich Low_complexity Low_complexity 1 50 0 337 213 67 0 chr10 2730743 2730818 -142858470 + Tigger3(Golem) DNA MER2_type 1 80 -2949 483 229 38 0 chr10 2730947 2731052 -142858236 + Tigger3(Golem) DNA MER2_type 2930 3038 0 225 267 17 0 chr10 2731923 2731983 -142857305 + (TG)n Simple_repeat Simple_repeat 2 62 0 268 313 146 30 chr10 2732549 2732782 -142856506 + L3 LINE CR1 701 960 -617 486 206 199 0 chr10 2733141 2733272 -142856016 - MER45A DNA AcHobo -19 159 3 2719 207 51 3 chr10 2733421 2734014 -142855274 - L1MB3 LINE L1 -15 6168 5548 694 224 42 21 chr10 2734009 2734250 -142855038 - L1MB3 LINE L1 -3261 2885 2640 * 1236 217 44 0 chr10 2734273 2734545 -142854743 - L1M3 LINE L1 -624 6519 6236 * 4216 255 95 28 chr10 2734542 2737189 -142852099 - L1M3 LINE L1 -2105 5001 1971 1854 189 0 0 chr10 2737189 2737490 -142851798 - AluSx SINE Alu -6 306 6 4216 255 95 28 chr10 2737490 2738233 -142851055 - L1M3 LINE L1 -5135 1971 1279 273 309 16 16 chr10 2738627 2738750 -142850538 - L1M3 LINE L1 -6903 127 5 232 197 115 0 chr10 2738759 2738820 -142850468 + MLT1F LTR MaLR 475 542 0 2379 150 28 14 chr10 2739110 2739469 -142849819 - THE1B LTR MaLR 0 364 1 1262 181 110 13 chr10 2740077 2740401 -142848887 - Tigger1 DNA MER2_type 0 2418 1 2228 110 0 0 chr10 2741926 2742226 -142847062 - AluSx SINE Alu -12 300 1 25 31 0 0 chr10 2743523 2743555 -142845733 + AT_rich Low_complexity Low_complexity 1 32 0 348 248 8 56 chr10 2743800 2743925 -142845363 + MER58 DNA MER1_type 2301 2419 -1 2311 88 0 0 chr10 2744185 2744480 -142844808 + AluY SINE Alu 1 295 -16 207 273 0 0 chr10 2744961 2745005 -142844283 + MIR SINE MIR 219 262 0 22 56 0 0 chr10 2745465 2745501 -142843787 + AT_rich Low_complexity Low_complexity 1 36 0 1794 121 7 78 chr10 2745502 2745809 -142843479 - AluSg SINE Alu -25 285 1 819 127 32 16 chr10 2745920 2746046 -142843242 + L1PA8A LINE L1 6004 6131 0 416 106 0 30 chr10 2746071 2746137 -142843151 + L2 LINE L2 3250 3313 0 662 301 81 31 chr10 2746809 2747168 -142842120 + L1ME3A LINE L1 5740 6116 -54 334 279 99 83 chr10 2749034 2749517 -142839771 + MLT1H LTR MaLR 10 500 -49 226 228 110 118 chr10 2749745 2749881 -142839407 + MLT1I LTR MaLR 249 383 -26 1231 122 5 46 chr10 2749942 2750139 -142839149 - L1PA8A LINE L1 -2 6129 5941 2488 72 0 3 chr10 2750169 2750476 -142838812 + AluY SINE Alu 6 311 0 359 327 9 9 chr10 2750479 2750586 -142838702 - MIR SINE MIR -141 121 15 255 103 0 0 chr10 2751095 2751134 -142838154 + (TTTTA)n Simple_repeat Simple_repeat 4 42 0 321 243 157 29 chr10 2751937 2752077 -142837211 - L2 LINE L2 -4 3309 3152 2166 96 4 0 chr10 2752098 2752378 -142836910 - AluSc SINE Alu -28 281 1 4789 85 2 0 chr10 2752912 2753512 -142835776 - L1PA8 LINE L1 0 6172 5572 282 297 133 16 chr10 2753696 2753824 -142835464 + MER5B DNA MER1_type 2 144 -34 185 309 18 0 chr10 2754877 2754932 -142834356 - MIR3 SINE MIR -7 201 146 3196 196 60 4 chr10 2754943 2755458 -142833830 - L1MA4A LINE L1 0 6303 5739 279 79 0 0 chr10 2755458 2755496 -142833792 + (TTCA)n Simple_repeat Simple_repeat 4 41 0 3196 196 60 4 chr10 2755496 2755663 -142833625 - L1MA4A LINE L1 -564 5739 5583 1533 111 53 0 chr10 2755829 2756037 -142833251 - AluSg SINE Alu -52 258 40 389 196 0 10 chr10 2757508 2757605 -142831683 + (TG)n Simple_repeat Simple_repeat 2 97 0 1507 154 3 65 chr10 2758359 2758651 -142830637 + AluJo SINE Alu 9 282 -30 481 317 102 15 chr10 2758700 2759104 -142830184 - L2 LINE L2 -1717 1597 1159 366 223 108 47 chr10 2759794 2759966 -142829322 - MLT1J1 LTR MaLR -8 417 246 203 231 31 0 chr10 2763115 2763180 -142826108 + (TCTG)n Simple_repeat Simple_repeat 2 68 0 297 287 165 9 chr10 2763747 2763862 -142825426 + MIR SINE MIR 27 159 -103 218 309 25 12 chr10 2763877 2763958 -142825330 + MIR SINE MIR 116 197 -65 2406 92 0 0 chr10 2764212 2764515 -142824773 + AluSq SINE Alu 1 303 -10 372 357 28 7 chr10 2764667 2764810 -142824478 + MER91A DNA MER1_type 3 148 -48 212 184 0 0 chr10 2765023 2765061 -142824227 + A-rich Low_complexity Low_complexity 1 38 0 307 290 43 91 chr10 2765321 2765865 -142823423 + L1ME LINE L1 5327 5855 -266 201 231 39 0 chr10 2765865 2765917 -142823371 + (TGGA)n Simple_repeat Simple_repeat 3 56 0 211 118 29 0 chr10 2767251 2767285 -142822003 + L2 LINE L2 3233 3267 -5 182 61 0 30 chr10 2767361 2767394 -142821894 + (TTTTG)n Simple_repeat Simple_repeat 1 32 0 1717 142 0 0 chr10 2767397 2767637 -142821651 - AluJb SINE Alu -27 285 46 28 48 0 0 chr10 2767687 2767729 -142821559 + AT_rich Low_complexity Low_complexity 1 42 0 24 32 0 0 chr10 2768203 2768234 -142821054 + AT_rich Low_complexity Low_complexity 1 31 0 3408 170 69 11 chr10 2769325 2769552 -142819736 - L1PB4 LINE L1 -3 6153 5941 2047 147 69 30 chr10 2769552 2769913 -142819375 + THE1C LTR MaLR 1 375 0 3408 170 69 11 chr10 2769913 2770326 -142818962 - L1PB4 LINE L1 -215 5941 5476 1096 194 51 0 chr10 2770326 2770522 -142818766 - AluJo SINE Alu -20 292 87 47 33 0 0 chr10 2771471 2771532 -142817756 + AT_rich Low_complexity Low_complexity 1 61 0 669 169 0 78 chr10 2771698 2771871 -142817417 + FLAM_C SINE Alu 1 133 0 1929 158 3 16 chr10 2771877 2772193 -142817095 - AluJb SINE Alu 0 312 1 180 167 0 28 chr10 2772943 2772979 -142816309 + L2 LINE L2 3222 3256 -16 180 263 0 66 chr10 2773116 2773192 -142816096 + L3 LINE CR1 1459 1529 -48 2192 121 7 0 chr10 2773353 2773660 -142815628 - AluSc SINE Alu 0 309 1 454 331 14 0 chr10 2774418 2774563 -142814725 - MIR SINE MIR -2 260 114 2243 69 3 17 chr10 2776190 2776481 -142812807 - AluSc SINE Alu -22 287 1 634 216 112 0 chr10 2777408 2777533 -142811755 - FAM SINE Alu -27 158 20 2050 136 3 0 chr10 2777599 2777894 -142811394 + AluSq SINE Alu 1 296 -17 2153 118 7 3 chr10 2777929 2778226 -142811062 + AluSx SINE Alu 1 298 -14 216 0 0 0 chr10 2778840 2778864 -142810424 + (CAATT)n Simple_repeat Simple_repeat 2 25 0 273 233 80 20 chr10 2780259 2780374 -142808914 + MLT1J LTR MaLR 46 181 -290 324 333 81 38 chr10 2780635 2780701 -142808587 + L1ME3A LINE L1 5680 5742 -428 2077 130 10 0 chr10 2780701 2781000 -142808288 + AluSg SINE Alu 5 306 -4 324 333 81 38 chr10 2781000 2781194 -142808094 + L1ME3A LINE L1 5742 5951 -219 1550 207 68 19 chr10 2781208 2781575 -142807713 - MLT1B LTR MaLR -2 388 4 435 137 0 0 chr10 2781739 2781812 -142807476 + (CA)n Simple_repeat Simple_repeat 2 74 0 201 237 13 26 chr10 2782063 2782139 -142807149 + A-rich Low_complexity Low_complexity 2 76 0 41 0 0 0 chr10 2782827 2782868 -142806420 + AT_rich Low_complexity Low_complexity 1 41 0 261 0 0 0 chr10 2783665 2783694 -142805594 + (CA)n Simple_repeat Simple_repeat 2 30 0 26 30 0 0 chr10 2783760 2783793 -142805495 + AT_rich Low_complexity Low_complexity 1 33 0 867 182 54 54 chr10 2784151 2784354 -142804934 + THE1B LTR MaLR 107 309 -55 1057 284 101 22 chr10 2784522 2785036 -142804252 - L2 LINE L2 -1 3312 2748 423 303 229 14 chr10 2785072 2785425 -142803863 - L2 LINE L2 -695 2619 2191 3346 113 26 27 chr10 2785443 2786018 -142803270 + MER51A LTR ERV1 1 634 0 323 285 145 73 chr10 2786018 2786322 -142802966 - L2 LINE L2 -1126 2188 1853 2257 115 0 3 chr10 2786322 2786636 -142802652 + AluSq SINE Alu 1 313 0 323 285 145 73 chr10 2786636 2786689 -142802599 - L2 LINE L2 -1461 1853 1805 24 0 0 0 chr10 2786711 2786735 -142802553 + AT_rich Low_complexity Low_complexity 1 24 0 1149 160 27 18 chr10 2786735 2786954 -142802334 - L1MB2 LINE L1 -3 6168 5948 384 262 0 12 chr10 2786993 2787077 -142802211 - MER5A DNA MER1_type -106 83 1 490 337 12 0 chr10 2787089 2787261 -142802027 - MER5B DNA MER1_type -4 174 1 * 935 309 182 19 chr10 2787261 2787901 -142801387 - L2 LINE L2 -1800 1514 770 502 308 140 22 chr10 2787901 2788222 -142801066 - L2 LINE L2 -2946 368 10 2177 134 3 0 chr10 2788668 2788975 -142800313 + AluSx SINE Alu 1 308 -4 2237 122 0 3 chr10 2791472 2791783 -142797505 + AluSg SINE Alu 1 310 0 9769 163 9 6 chr10 2792304 2795051 -142794237 + L1PB1 LINE L1 3394 6151 0 2094 127 3 0 chr10 2795196 2795487 -142793801 - AluSx SINE Alu -20 292 1 223 284 43 43 chr10 2795950 2796066 -142793222 + L2 LINE L2 2170 2285 -1029 396 123 15 0 chr10 2796482 2796547 -142792741 - MER41B LTR ERV1 -86 549 484 342 217 36 0 chr10 2796761 2796927 -142792361 + (TA)n Simple_repeat Simple_repeat 1 172 0 931 236 75 78 chr10 2796991 2797402 -142791886 + MLT2D LTR ERVL 1 410 -4 27 73 0 0 chr10 2799181 2799236 -142790052 + AT_rich Low_complexity Low_complexity 1 55 0 207 292 0 42 chr10 2799279 2799375 -142789913 + (TATATG)n Simple_repeat Simple_repeat 6 97 0 249 341 0 11 chr10 2800190 2800281 -142789007 + CT-rich Low_complexity Low_complexity 4 93 0 2270 119 3 0 chr10 2800938 2801248 -142788040 + AluSp SINE Alu 1 311 -2 1999 135 4 4 chr10 2801684 2802008 -142787280 + AluSx SINE Alu 3 326 0 3174 147 18 6 chr10 2802169 2802672 -142786616 - MER75 DNA T2_type -5 509 1 576 249 125 66 chr10 2803256 2803743 -142785545 - HAL1 LINE L1 -115 2392 1877 1262 293 122 52 chr10 2803840 2803899 -142785389 - HAL1 LINE L1 -794 1713 1660 2371 95 0 0 chr10 2803899 2804195 -142785093 + AluY SINE Alu 1 296 -15 1262 293 122 52 chr10 2804195 2804914 -142784374 - HAL1 LINE L1 -847 1660 837 267 54 0 0 chr10 2804914 2804951 -142784337 + (TG)n Simple_repeat Simple_repeat 2 38 0 1262 293 122 52 chr10 2804951 2805244 -142784044 - HAL1 LINE L1 -1670 837 566 234 300 71 52 chr10 2805459 2805669 -142783619 - HAL1 LINE L1 -2266 241 28 298 320 25 16 chr10 2805857 2805979 -142783309 - MIR3 SINE MIR -31 177 55 224 283 88 38 chr10 2806907 2807066 -142782222 + L2 LINE L2 2073 2239 -1075 406 317 63 10 chr10 2807085 2807290 -142781998 - MIR SINE MIR -1 261 46 396 374 94 11 chr10 2807450 2807918 -142781370 + L2 LINE L2 2361 2867 -447 304 315 128 62 chr10 2808233 2808639 -142780649 - L2 LINE L2 -337 2977 2545 376 104 30 15 chr10 2809000 2809067 -142780221 + MADE1 DNA Mariner 13 80 0 211 246 18 0 chr10 2809479 2809536 -142779752 + GA-rich Low_complexity Low_complexity 4 61 0 271 289 104 81 chr10 2810477 2810714 -142778574 + L1MC4 LINE L1 6197 6427 -1466 2275 115 3 0 chr10 2810714 2811018 -142778270 + AluSx SINE Alu 1 305 -7 271 289 104 81 chr10 2811018 2811348 -142777940 + L1MC4 LINE L1 6427 6862 -1031 186 103 0 0 chr10 2812358 2812387 -142776901 + (TATATG)n Simple_repeat Simple_repeat 4 32 0 344 307 102 49 chr10 2812431 2812636 -142776652 + HAL1b LINE L1 392 607 -741 2295 143 28 6 chr10 2812651 2813007 -142776281 - THE1B LTR MaLR 0 364 1 593 90 0 0 chr10 2813794 2813872 -142775416 - MADE1 DNA Mariner -2 78 1 235 170 21 0 chr10 2816758 2816805 -142772483 + T-rich Low_complexity Low_complexity 2 49 0 2285 185 58 28 chr10 2818085 2819219 -142770069 + L1MB2 LINE L1 6 1381 -5003 * 2321 238 70 13 chr10 2819212 2820255 -142769033 + L1MB2 LINE L1 2239 3345 -3037 6091 202 38 37 chr10 2820443 2821969 -142767319 + L1MB2 LINE L1 3952 5479 -903 3340 180 30 9 chr10 2821969 2822598 -142766690 + L1MB2 LINE L1 5756 6397 -10 198 277 106 21 chr10 2823148 2823242 -142766046 - MIR3 SINE MIR -95 113 12 214 294 35 35 chr10 2824207 2824292 -142764996 + L2 LINE L2 3179 3263 -9 1883 201 31 3 chr10 2824300 2824654 -142764634 + MLT1A1 LTR MaLR 2 365 0 21 36 0 0 chr10 2825034 2825062 -142764226 + AT_rich Low_complexity Low_complexity 1 28 0 5113 86 5 5 chr10 2825072 2825725 -142763563 + L1PA10 LINE L1 5506 6158 -10 280 261 30 37 chr10 2825815 2825949 -142763339 + L1ME4a LINE L1 5756 5888 -233 258 231 0 0 chr10 2826526 2826591 -142762697 + (CA)n Simple_repeat Simple_repeat 2 66 0 470 287 45 42 chr10 2826672 2826961 -142762327 + L1ME3A LINE L1 5667 5956 -214 1326 113 5 0 chr10 2827063 2827249 -142762039 + THE1C LTR MaLR 1 187 -188 756 219 114 0 chr10 2827249 2827450 -142761838 + L1M4 LINE L1 2451 2674 -3472 1636 248 82 42 chr10 2827595 2827919 -142761369 + L1M4 LINE L1 2897 3206 -2940 180 0 0 0 chr10 2827919 2827939 -142761349 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1636 248 82 42 chr10 2827939 2828528 -142760760 + L1M4 LINE L1 3206 3847 -2299 629 340 43 24 chr10 2828534 2828955 -142760333 + L1MA9 LINE L1 580 1008 -5711 2028 208 38 25 chr10 2829460 2830049 -142759239 + L1MA9 LINE L1 1445 2039 -4680 * 2425 185 12 144 chr10 2830045 2830246 -142759042 + L1MA9 LINE L1 5532 5758 -1175 5449 44 5 2 chr10 2830246 2831287 -142758001 - SVA Other Other -954 1384 16 2425 185 12 144 chr10 2831287 2832123 -142757165 + L1MA9 LINE L1 5758 6435 -498 930 193 56 5 chr10 2832222 2832473 -142756815 + L1MA9 LINE L1 6424 6709 -101 3055 224 112 4 chr10 2832473 2833100 -142756188 + L1MB7 LINE L1 5297 6027 -157 1600 112 139 147 chr10 2833100 2833261 -142756027 + MSTA LTR MaLR 1 162 -266 2227 121 0 0 chr10 2833261 2833566 -142755722 + AluSx SINE Alu 1 305 -7 1600 112 139 147 chr10 2833566 2833834 -142755454 + MSTA LTR MaLR 162 427 -1 3055 224 112 4 chr10 2833834 2833991 -142755297 + L1MB7 LINE L1 6027 6166 -18 1481 247 34 36 chr10 2834401 2834975 -142754313 + L1ME LINE L1 5163 5739 -425 2132 122 0 0 chr10 2835109 2835405 -142753883 - AluSx SINE Alu -14 298 3 2015 158 27 27 chr10 2835407 2835775 -142753513 - Tigger2a DNA MER2_type -66 368 1 566 247 97 14 chr10 2835836 2836115 -142753173 + L1M4 LINE L1 2880 3181 -2965 28 29 0 0 chr10 2836300 2836335 -142752953 + AT_rich Low_complexity Low_complexity 1 35 0 377 321 47 69 chr10 2836781 2837343 -142751945 - L2 LINE L2 -1 3312 2766 21 0 0 0 chr10 2837499 2837520 -142751768 + AT_rich Low_complexity Low_complexity 1 21 0 1992 149 0 13 chr10 2837520 2837821 -142751467 - AluSx SINE Alu -15 297 1 2582 66 0 0 chr10 2839644 2839949 -142749339 - AluY SINE Alu -6 305 1 198 0 0 0 chr10 2840761 2840783 -142748505 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 2087 121 0 0 chr10 2840785 2841066 -142748222 - AluSx SINE Alu -31 281 1 26 23 0 23 chr10 2841276 2841290 -142747998 + AT_rich Low_complexity Low_complexity 1 14 -29 2122 102 3 3 chr10 2841290 2841574 -142747714 + AluSg1 SINE Alu 1 284 -25 26 23 0 23 chr10 2841574 2841603 -142747685 + AT_rich Low_complexity Low_complexity 14 43 0 192 302 47 38 chr10 2843621 2843727 -142745561 - L3b LINE CR1 -209 1374 1268 1723 207 42 45 chr10 2843987 2844127 -142745161 - L1MA7 LINE L1 -1 6290 6151 267 31 0 0 chr10 2844127 2844159 -142745129 + (TG)n Simple_repeat Simple_repeat 1 32 0 1723 207 42 45 chr10 2844159 2844443 -142744845 - L1MA7 LINE L1 -140 6151 5867 973 203 38 38 chr10 2844782 2845018 -142744270 + L1MCa LINE L1 21 256 -6170 * 1192 233 76 3 chr10 2845017 2845334 -142743954 + L1MCa LINE L1 787 1126 -5300 1735 153 7 7 chr10 2845563 2845838 -142743450 + AluJo SINE Alu 1 275 -37 377 273 30 15 chr10 2847084 2847216 -142742072 + MLT1H LTR MaLR 392 525 -24 400 172 164 70 chr10 2847323 2847451 -142741837 - MLT1I LTR MaLR 0 549 280 306 302 38 0 chr10 2848984 2849090 -142740198 - L1MC4 LINE L1 -1340 6702 6593 210 116 23 23 chr10 2849432 2849475 -142739813 + T-rich Low_complexity Low_complexity 5 47 0 187 54 54 0 chr10 2849636 2849673 -142739615 + (TA)n Simple_repeat Simple_repeat 2 40 0 282 157 58 25 chr10 2849853 2850039 -142739249 + (TA)n Simple_repeat Simple_repeat 1 192 0 1452 255 42 0 chr10 2850956 2851289 -142737999 + MER7A DNA MER2_type 1 345 -1 2578 219 16 66 chr10 2851374 2851802 -142737486 + MER82 DNA MER2_type 1 384 -269 2126 135 0 0 chr10 2851802 2852131 -142737157 + AluSx SINE Alu 1 312 0 2578 219 16 66 chr10 2852131 2852381 -142736907 + MER82 DNA MER2_type 384 645 -8 264 286 14 0 chr10 2852454 2852524 -142736764 + MER46C DNA MER2_type 259 329 -9 1600 279 139 16 chr10 2853021 2853763 -142735525 + MER97b DNA MER1_type? 4 836 -217 24 67 0 0 chr10 2853967 2854012 -142735276 + AT_rich Low_complexity Low_complexity 1 45 0 264 187 77 66 chr10 2854016 2854107 -142735181 + MER97a DNA MER1_type? 795 886 -8 276 186 114 0 chr10 2855100 2855170 -142734118 - MER116 DNA Mariner -2 78 1 1768 144 3 144 chr10 2855265 2855655 -142733633 - MER1B DNA MER1_type -2 335 1 527 304 126 34 chr10 2856052 2856435 -142732853 + L2 LINE L2 1520 1945 -1369 1464 237 62 27 chr10 2856435 2856886 -142732402 - MLT1C LTR MaLR 0 467 1 527 304 126 34 chr10 2856886 2856916 -142732372 + L2 LINE L2 1945 1971 -1343 861 234 7 57 chr10 2856920 2857202 -142732086 + MLT1B LTR MaLR 1 268 -122 302 277 66 7 chr10 2857202 2857339 -142731949 + L2 LINE L2 2332 2476 -838 1113 128 122 0 chr10 2857347 2857527 -142731761 - AluJb SINE Alu -25 287 86 339 330 130 15 chr10 2857628 2858021 -142731267 + L2 LINE L2 2622 3066 -247 2697 35 3 0 chr10 2860958 2861268 -142728020 - AluY SINE Alu 0 311 1 24 0 0 0 chr10 2861469 2861493 -142727795 + GC_rich Low_complexity Low_complexity 1 24 0 1622 205 76 12 chr10 2861921 2862331 -142726957 - L1MDa LINE L1 -4297 2243 1808 * 2579 275 182 17 chr10 2862322 2863316 -142725972 - L1MDa LINE L1 -5339 1201 44 867 198 11 84 chr10 2863351 2863614 -142725674 - MLT1A2 LTR MaLR 0 374 131 24 32 0 0 chr10 2863617 2863648 -142725640 + AT_rich Low_complexity Low_complexity 1 31 0 227 208 0 19 chr10 2864461 2864514 -142724774 + CT-rich Low_complexity Low_complexity 2 53 0 379 218 0 0 chr10 2865244 2865331 -142723957 - L1MA9 LINE L1 0 6312 6226 22 70 0 0 chr10 2865840 2865883 -142723405 + AT_rich Low_complexity Low_complexity 1 43 0 1829 122 0 0 chr10 2869305 2869552 -142719736 + AluSx SINE Alu 42 288 -24 1181 74 4 8 chr10 2869555 2869817 -142719471 + (GAAA)n Simple_repeat Simple_repeat 1 261 0 297 0 0 0 chr10 2870036 2870069 -142719219 + (TA)n Simple_repeat Simple_repeat 2 34 0 581 296 100 17 chr10 2871442 2871672 -142717616 - MIR SINE MIR -11 251 3 900 124 49 27 chr10 2973060 2973285 -142616003 + AluY SINE Alu 81 310 -1 180 111 0 0 chr10 2973829 2973856 -142615432 + (CATATA)n Simple_repeat Simple_repeat 2 28 0 2219 223 43 8 chr10 2975299 2975806 -142613482 - MER74A LTR ERVL 0 558 34 2050 98 3 57 chr10 2976176 2976492 -142612796 + AluSg SINE Alu 1 299 -11 4480 207 44 27 chr10 2977165 2977312 -142611976 - L1MB7 LINE L1 -9 6175 6032 2352 81 0 0 chr10 2977312 2977620 -142611668 + AluY SINE Alu 1 308 -3 4480 207 44 27 chr10 2977620 2979396 -142609892 - L1MB7 LINE L1 -152 6032 4219 343 308 39 0 chr10 2979411 2979541 -142609747 - MIR SINE MIR -6 256 122 875 240 56 65 chr10 2980549 2981078 -142608210 + MLT1E LTR MaLR 21 593 0 270 0 0 0 chr10 2981225 2981255 -142608033 + (A)n Simple_repeat Simple_repeat 1 30 0 234 263 0 0 chr10 2981575 2981632 -142607656 + (CA)n Simple_repeat Simple_repeat 1 57 0 297 276 162 17 chr10 2982130 2982278 -142607010 - MER5A DNA MER1_type -5 184 7 1211 223 51 3 chr10 2983487 2983662 -142605626 - AluJb SINE Alu -5 307 111 270 0 0 0 chr10 2983662 2983692 -142605596 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 1211 223 51 3 chr10 2983692 2983808 -142605480 - AluJb SINE Alu -201 111 2 1740 170 10 0 chr10 2984000 2984300 -142604988 - AluJo SINE Alu -9 303 1 867 157 4 6 chr10 2985162 2985883 -142603405 + (CTCA)n Simple_repeat Simple_repeat 1 720 0 922 163 3 12 chr10 2985903 2985940 -142603348 + (CTCA)n Simple_repeat Simple_repeat 1 37 -1675 6122 114 25 28 chr10 2985940 2986912 -142602376 + LTR5 LTR ERVK 1 969 0 922 163 3 12 chr10 2986912 2987631 -142601657 + (CTCA)n Simple_repeat Simple_repeat 37 1712 0 237 337 116 35 chr10 2987632 2988003 -142601285 - L2 LINE L2 -1 3312 2912 662 268 45 15 chr10 2988415 2988613 -142600675 + MER20 DNA MER1_type 16 219 0 1938 99 50 7 chr10 2988944 2989227 -142600061 - AluSx SINE Alu -17 295 1 3676 25 0 7 chr10 2989962 2990396 -142598892 - L1PA5 LINE L1 0 6154 5724 297 83 0 33 chr10 2990614 2990674 -142598614 - L1MA4A LINE L1 -1 6302 6245 227 231 46 0 chr10 2990683 2990748 -142598540 - L1MB4 LINE L1 -2 6178 6111 1293 219 77 41 chr10 2990782 2990901 -142598387 - L1MA4 LINE L1 -294 6006 5893 2055 98 3 7 chr10 2990901 2991198 -142598090 - AluSq SINE Alu -13 300 5 1293 219 77 41 chr10 2991198 2991466 -142597822 - L1MA4 LINE L1 -407 5893 5605 711 158 29 53 chr10 2991465 2991621 -142597667 - L1MA4 LINE L1 -44 6256 6105 * 215 211 21 42 chr10 2991624 2991719 -142597569 + (TTATA)n Simple_repeat Simple_repeat 2 94 0 1266 165 29 98 chr10 2991734 2992080 -142597208 - L1MA4 LINE L1 -192 6108 5787 484 194 43 0 chr10 2992080 2992187 -142597101 + L1ME LINE L1 5724 5834 -287 1446 152 115 0 chr10 2993502 2993771 -142595517 + AluSx SINE Alu 2 301 -11 590 132 0 0 chr10 2995245 2995336 -142593952 + AluY SINE Alu 219 309 -2 1785 175 62 73 chr10 2995363 2995802 -142593486 + Tigger2a DNA MER2_type 1 434 0 243 0 0 0 chr10 2996247 2996274 -142593014 + (CA)n Simple_repeat Simple_repeat 2 28 0 206 235 0 10 chr10 2996275 2996373 -142592915 + GA-rich Low_complexity Low_complexity 2 98 0 294 239 0 0 chr10 2996392 2996505 -142592783 + GA-rich Low_complexity Low_complexity 2 114 0 1809 196 38 30 chr10 2996950 2997082 -142592206 + MSTD LTR MaLR 1 130 -266 2302 93 0 3 chr10 2997082 2997394 -142591894 - AluY SINE Alu 0 311 1 1809 196 38 30 chr10 2997394 2997654 -142591634 + MSTD LTR MaLR 130 396 0 857 297 26 62 chr10 2998430 2998922 -142590366 + MLT1J LTR MaLR 1 511 0 234 263 53 13 chr10 2998994 2999070 -142590218 - MIR3 SINE MIR -23 185 107 1215 126 16 11 chr10 2999090 2999280 -142590008 - MER4C LTR ERV1 0 465 275 213 282 0 0 chr10 2999336 2999510 -142589778 + G-rich Low_complexity Low_complexity 5 178 0 1739 147 47 13 chr10 2999554 2999853 -142589435 - MER4C LTR ERV1 -156 309 1 2411 86 28 81 chr10 3000913 3001310 -142587978 + MER51B LTR ERV1 2 377 0 2266 83 3 10 chr10 3001340 3001653 -142587635 - AluY SINE Alu 0 311 1 592 137 11 11 chr10 3001884 3001979 -142587309 + AluSp/q SINE Alu 208 302 -11 2104 246 94 81 chr10 3002085 3002367 -142586921 + L1ME1 LINE L1 4693 4970 -1196 1187 55 0 22 chr10 3002367 3002548 -142586740 + (GAAA)n Simple_repeat Simple_repeat 4 180 0 2274 61 7 7 chr10 3002551 3002846 -142586442 + AluY SINE Alu 1 295 -16 2104 246 94 81 chr10 3002846 3003541 -142585747 + L1ME1 LINE L1 4971 5656 -510 1588 157 0 83 chr10 3003541 3003879 -142585409 + AluJo SINE Alu 3 312 0 2104 246 94 81 chr10 3003879 3003921 -142585367 + L1ME1 LINE L1 5656 5696 -470 4011 50 2 4 chr10 3003921 3004417 -142584871 - L1PA3 LINE L1 -1 6154 5660 2104 246 94 81 chr10 3004417 3004840 -142584448 + L1ME1 LINE L1 5696 6161 -5 1929 118 4 0 chr10 3005217 3005497 -142583791 - AluSq SINE Alu -32 281 1 1896 140 0 7 chr10 3006257 3006543 -142582745 + AluJo SINE Alu 3 286 -26 351 0 0 0 chr10 3006566 3006605 -142582683 + (TA)n Simple_repeat Simple_repeat 2 40 0 2051 136 0 0 chr10 3006605 3006906 -142582382 - AluSx SINE Alu -8 304 1 305 274 53 26 chr10 3007498 3007611 -142581677 + MER112 DNA MER1_type 87 202 -58 810 184 0 0 chr10 3009473 3009652 -142579636 + CT-rich Low_complexity Low_complexity 1 179 0 2005 147 0 28 chr10 3010987 3011307 -142577981 - AluSx SINE Alu -1 311 1 259 278 90 21 chr10 3011408 3011552 -142577736 + L1MEd LINE L1 5 158 -5961 271 280 99 56 chr10 3012115 3012347 -142576941 + L1ME LINE L1 5614 5855 -315 2166 115 3 16 chr10 3012613 3012926 -142576362 - AluSp SINE Alu -4 309 1 310 215 223 8 chr10 3012985 3013115 -142576173 - MER104 DNA Tc2 -5 175 18 1835 138 50 44 chr10 3013302 3013664 -142575624 - THE1B LTR MaLR 0 364 1 198 310 14 0 chr10 3014044 3014115 -142575173 - MIR SINE MIR -33 229 158 784 159 0 0 chr10 3015127 3015259 -142574029 + FLAM_C SINE Alu 1 132 -1 198 305 179 13 chr10 3016048 3016199 -142573089 - MIR SINE MIR -1 261 86 1559 173 41 11 chr10 3016285 3016425 -142572863 - AluJo SINE Alu -38 274 140 243 0 0 0 chr10 3016425 3016452 -142572836 + (TTA)n Simple_repeat Simple_repeat 2 28 0 1559 173 41 11 chr10 3016452 3016577 -142572711 - AluJo SINE Alu -172 140 1 207 0 0 0 chr10 3016896 3016919 -142572369 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 222 118 0 0 chr10 3016954 3016988 -142572300 + (T)n Simple_repeat Simple_repeat 1 34 0 186 277 84 0 chr10 3017412 3017495 -142571793 - MIR SINE MIR -113 149 60 197 304 51 0 chr10 3017528 3017607 -142571681 + L2 LINE L2 3179 3261 -11 1963 133 3 11 chr10 3019356 3019669 -142569619 - AluSx SINE Alu 0 311 1 181 219 94 0 chr10 3019917 3019981 -142569307 - L2 LINE L2 -516 2798 2729 183 80 0 0 chr10 3020010 3020035 -142569253 + (GGGGA)n Simple_repeat Simple_repeat 3 27 0 3420 114 8 4 chr10 3020347 3020856 -142568432 - MER9 LTR ERVK 0 511 1 225 196 0 0 chr10 3021076 3021122 -142568166 - Charlie5 DNA MER1_type -17 2595 2550 1825 169 3 10 chr10 3021149 3021451 -142567837 + AluJo SINE Alu 3 302 -10 1052 25 0 0 chr10 3021454 3021574 -142567714 + AluYb8 SINE Alu 199 318 0 293 262 79 0 chr10 3021599 3021725 -142567563 - Charlie5 DNA MER1_type -114 2498 2363 351 249 66 95 chr10 3021922 3022271 -142567017 + L2 LINE L2 2951 3289 -24 2523 76 0 19 chr10 3022777 3023092 -142566196 - AluSc SINE Alu 0 309 1 196 333 40 30 chr10 3024149 3024248 -142565040 + MIR SINE MIR 34 133 -129 227 216 162 0 chr10 3024496 3024570 -142564718 + MER5A DNA MER1_type 42 127 -62 2584 55 0 0 chr10 3024768 3025060 -142564228 - AluY SINE Alu -19 292 1 1290 266 130 40 chr10 3026306 3027163 -142562125 + L1ME1 LINE L1 5214 6150 -16 1542 109 0 0 chr10 3027420 3027622 -142561666 - AluY SINE Alu 0 311 110 1853 154 3 39 chr10 3029022 3029333 -142559955 + AluJb SINE Alu 1 300 -12 181 289 52 31 chr10 3034666 3034763 -142554525 + MIR SINE MIR 152 250 -12 427 263 143 19 chr10 3035660 3035869 -142553419 - MIR SINE MIR -19 243 9 21 36 0 0 chr10 3036355 3036383 -142552905 + AT_rich Low_complexity Low_complexity 1 28 0 1849 182 3 6 chr10 3036394 3036707 -142552581 - AluJo SINE Alu 0 312 1 1696 159 32 0 chr10 3040008 3040285 -142549003 + AluJo SINE Alu 16 301 -11 979 202 214 9 chr10 3040794 3041229 -142548059 + Tigger7 DNA MER2_type 1 2479 -8 738 148 42 7 chr10 3041401 3041543 -142547745 + AluJb SINE Alu 136 282 -30 222 128 0 0 chr10 3041561 3041600 -142547688 + (TAGG)n Simple_repeat Simple_repeat 1 39 0 2169 98 0 4 chr10 3044968 3045243 -142544045 - AluSc SINE Alu -35 274 1 337 276 45 45 chr10 3046349 3046505 -142542783 + L1M4 LINE L1 3691 3846 -2300 190 284 74 21 chr10 3047159 3047254 -142542034 + MIR3 SINE MIR 9 108 -100 2138 129 0 0 chr10 3047496 3047783 -142541505 + AluSx SINE Alu 1 287 -25 1301 176 38 31 chr10 3048152 3048413 -142540875 + Tigger7 DNA MER2_type 5 267 -466 316 261 11 11 chr10 3048410 3048502 -142540786 + Tigger7 DNA MER2_type 2388 2479 -8 * 242 240 0 0 chr10 3048865 3048915 -142540373 - L2 LINE L2 -2 3270 3221 2306 110 0 7 chr10 3049468 3049776 -142539512 + AluSx SINE Alu 1 306 -6 775 194 203 13 chr10 3049852 3050084 -142539204 - Tigger3(Golem) DNA MER2_type 0 3038 2763 36 62 0 0 chr10 3050101 3050165 -142539123 + AT_rich Low_complexity Low_complexity 1 64 0 289 159 286 0 chr10 3050181 3050244 -142539044 - Tigger3(Golem) DNA MER2_type -2947 82 2 2260 97 10 0 chr10 3050371 3050660 -142538628 + AluSg SINE Alu 2 293 -17 225 90 15 134 chr10 3052387 3052454 -142536834 + MLT1E2 LTR MaLR 2 60 -566 373 241 77 65 chr10 3052926 3053096 -142536192 + L2 LINE L2 3095 3266 -6 248 351 38 5 chr10 3056972 3057183 -142532105 + MER46C DNA MER2_type 121 338 0 417 295 74 0 chr10 3058247 3058437 -142530851 - MER20 DNA MER1_type 0 219 16 1868 161 3 19 chr10 3059110 3059427 -142529861 + AluJb SINE Alu 1 312 0 1094 161 0 0 chr10 3060408 3060576 -142528712 + AluJb SINE Alu 134 301 -11 2498 77 3 0 chr10 3061836 3062146 -142527142 - AluSx SINE Alu -1 311 1 530 154 11 0 chr10 3063173 3063264 -142526024 - AluSc SINE Alu -213 96 5 396 299 62 14 chr10 3065595 3065806 -142523482 + L2 LINE L2 2050 2270 -1044 440 297 175 25 chr10 3066294 3066648 -142522640 + L2 LINE L2 2396 2802 -512 207 271 66 74 chr10 3066907 3067005 -142522283 + L2 LINE L2 3182 3280 -33 2391 101 0 0 chr10 3067005 3067302 -142521986 + AluSx SINE Alu 1 297 -15 207 271 66 74 chr10 3067302 3067325 -142521963 + L2 LINE L2 3280 3302 -11 343 280 136 0 chr10 3067410 3067535 -142521753 + MIR SINE MIR 111 252 -10 1470 127 0 51 chr10 3068593 3068829 -142520459 + AluSx SINE Alu 7 230 -82 362 322 96 0 chr10 3069783 3069929 -142519359 + MIR SINE MIR 87 246 -16 368 309 3 3 chr10 3070096 3070469 -142518819 + (CA)n Simple_repeat Simple_repeat 1 373 0 275 258 12 12 chr10 3070487 3070650 -142518638 + (CA)n Simple_repeat Simple_repeat 2 164 0 261 219 0 0 chr10 3070740 3070813 -142518475 + (CA)n Simple_repeat Simple_repeat 2 74 0 2261 74 7 58 chr10 3070968 3071277 -142518011 + AluY SINE Alu 1 293 -18 250 339 17 17 chr10 3073245 3073363 -142515925 + MIR3 SINE MIR 86 203 -5 590 239 3 43 chr10 3074471 3074824 -142514464 + G-rich Low_complexity Low_complexity 1 338 0 222 301 0 46 chr10 3074836 3074989 -142514299 + (CTAGGG)n Simple_repeat Simple_repeat 1 146 0 218 295 0 39 chr10 3075491 3075569 -142513719 + G-rich Low_complexity Low_complexity 1 75 0 1581 160 82 7 chr10 3078419 3078701 -142510587 - AluJo SINE Alu -9 303 1 1910 92 0 82 chr10 3079369 3079672 -142509616 + AluSx SINE Alu 35 312 0 180 0 0 0 chr10 3080665 3080685 -142508603 + (T)n Simple_repeat Simple_repeat 1 20 0 308 64 21 0 chr10 3081463 3081510 -142507778 + (CA)n Simple_repeat Simple_repeat 1 48 0 2312 100 0 0 chr10 3082578 3082867 -142506421 - AluSg SINE Alu -21 289 1 28 0 0 0 chr10 3084297 3084325 -142504963 + GC_rich Low_complexity Low_complexity 1 28 0 216 170 0 0 chr10 3084373 3084426 -142504862 + G-rich Low_complexity Low_complexity 6 58 0 306 342 17 8 chr10 3086357 3086477 -142502811 + MIR SINE MIR 30 150 -112 189 263 105 75 chr10 3086562 3086695 -142502593 - MIR SINE MIR -55 207 71 197 319 71 26 chr10 3087275 3087388 -142501900 - L2 LINE L2 -36 3236 3119 181 320 39 0 chr10 3087511 3087589 -142501699 - MIR SINE MIR -130 132 52 453 309 17 33 chr10 3087603 3087784 -142501504 + MIR SINE MIR 58 235 -27 1662 102 26 4 chr10 3089548 3089774 -142499514 - AluSg/x SINE Alu -9 301 71 1956 182 5 16 chr10 3089812 3090181 -142499107 + MLT1A1 LTR MaLR 1 365 0 355 275 132 18 chr10 3090281 3090448 -142498840 + MER5A DNA MER1_type 1 186 -3 1007 218 34 103 chr10 3090970 3091350 -142497938 + MLT1J LTR MaLR 1 354 -157 187 405 56 8 chr10 3091419 3091545 -142497743 - L2 LINE L2 -25 3247 3116 1167 281 49 85 chr10 3091761 3092583 -142496705 + L1MC5 LINE L1 6730 7521 -440 24 32 0 0 chr10 3094557 3094588 -142494700 + AT_rich Low_complexity Low_complexity 1 31 0 335 327 65 0 chr10 3094657 3094871 -142494417 + L1MC/D LINE L1 5576 5803 -2005 1939 158 14 0 chr10 3095109 3095406 -142493882 + AluSx SINE Alu 1 301 -11 2300 110 7 0 chr10 3095795 3096096 -142493192 + AluSc SINE Alu 1 303 -6 983 243 156 30 chr10 3096584 3096885 -142492403 + MLT2C1 LTR ERVL 1 339 -58 377 70 18 0 chr10 3096885 3096942 -142492346 + (TCTA)n Simple_repeat Simple_repeat 4 61 0 709 265 12 0 chr10 3096944 3097114 -142492174 - ERVL LTR ERVL -5104 660 489 1707 253 48 14 chr10 3097137 3097290 -142491998 + ERVL-C1 LTR ERVL 252 398 -5366 2342 68 0 4 chr10 3097290 3097569 -142491719 - AluY SINE Alu -10 301 24 1707 253 48 14 chr10 3097569 3097854 -142491434 + ERVL-C1 LTR ERVL 398 705 -5059 331 352 31 48 chr10 3097965 3098317 -142490971 + ERVL LTR ERVL 4908 5253 -511 512 278 73 20 chr10 3098640 3098885 -142490403 + LTR16C LTR ERVL 232 489 -2 210 222 37 19 chr10 3099381 3099435 -142489853 - MIR SINE MIR -102 160 106 1895 146 0 0 chr10 3100680 3100948 -142488340 + AluSx SINE Alu 27 294 -18 205 132 57 19 chr10 3100980 3101033 -142488255 + T-rich Low_complexity Low_complexity 4 58 0 4352 96 3 0 chr10 3101054 3101670 -142487618 - L1PA10 LINE L1 -11 6157 5540 599 317 77 35 chr10 3102043 3102418 -142486870 - MLT1L LTR MaLR -224 391 1 2585 74 0 0 chr10 3102647 3102957 -142486331 - AluY SINE Alu -1 310 1 3512 211 45 22 chr10 3104181 3104530 -142484758 - L1MB3 LINE L1 -2 6181 5842 2640 52 0 3 chr10 3104530 3104838 -142484450 - AluY SINE Alu -4 307 1 3512 211 45 22 chr10 3104838 3105356 -142483932 - L1MB3 LINE L1 -341 5842 5294 1614 200 43 3 chr10 3105396 3105696 -142483592 + AluJo SINE Alu 1 312 0 2346 174 12 7 chr10 3105722 3106146 -142483142 + MSTB LTR MaLR 1 426 0 191 284 37 25 chr10 3106520 3106601 -142482687 - MIR SINE MIR -153 109 28 975 259 34 39 chr10 3106695 3107050 -142482238 - MLT2D LTR ERVL 0 414 62 316 309 32 42 chr10 3107402 3107619 -142481669 - L2 LINE L2 -5 3308 3094 239 93 481 0 chr10 3107741 3107795 -142481493 + MADE1 DNA Mariner 1 80 0 21 0 0 0 chr10 3108598 3108619 -142480669 + AT_rich Low_complexity Low_complexity 1 21 0 279 0 0 0 chr10 3109089 3109120 -142480168 + (GA)n Simple_repeat Simple_repeat 2 32 0 22 35 0 0 chr10 3109366 3109395 -142479893 + AT_rich Low_complexity Low_complexity 1 29 0 5599 140 32 1 chr10 3109543 3110720 -142478568 + L1PB2 LINE L1 4936 6149 -2 22 0 0 0 chr10 3110914 3110936 -142478352 + AT_rich Low_complexity Low_complexity 1 22 0 331 335 108 19 chr10 3111419 3111631 -142477657 - MIR SINE MIR -16 246 16 2183 105 0 7 chr10 3111679 3111983 -142477305 + AluSx SINE Alu 11 312 0 391 300 46 15 chr10 3112108 3112238 -142477050 + MIR SINE MIR 110 243 -19 23 0 0 0 chr10 3113048 3113071 -142476217 + AT_rich Low_complexity Low_complexity 1 23 0 2435 104 28 8 chr10 3113362 3113719 -142475569 - THE1B LTR MaLR 0 364 1 1501 179 42 28 chr10 3114991 3115348 -142473940 + L1MA4A LINE L1 5941 6302 -1 2451 51 0 0 chr10 3116302 3116598 -142472690 - AluY SINE Alu -7 304 9 560 291 86 42 chr10 3118029 3118438 -142470850 - MARNA DNA Mariner -134 452 26 2402 63 0 0 chr10 3119460 3119763 -142469525 + AluY SINE Alu 1 303 -8 408 252 26 43 chr10 3170472 3170587 -142418701 - L1MC4 LINE L1 -1340 6702 6590 300 271 83 10 chr10 3170511 3170607 -142418681 + L1MC3 LINE L1 6571 6673 -1112 * 1189 213 0 0 chr10 3171993 3172223 -142417065 - Tigger5 DNA MER2_type 0 2323 2094 1938 155 7 3 chr10 3173267 3173564 -142415724 - AluJo SINE Alu -14 298 1 498 226 88 13 chr10 3174264 3174412 -142414876 + MLT1B LTR MaLR 2 164 -226 1866 85 0 0 chr10 3174412 3174647 -142414641 + AluSc SINE Alu 67 301 -8 406 211 11 0 chr10 3174706 3174881 -142414407 + CT-rich Low_complexity Low_complexity 2 178 0 * 664 102 0 75 chr10 3174847 3175034 -142414254 + (TCTCTG)n Simple_repeat Simple_repeat 2 174 0 829 213 6 0 chr10 3175067 3175236 -142414052 + MLT1B LTR MaLR 205 374 -16 279 365 171 0 chr10 3176610 3176821 -142412467 + MIR SINE MIR 16 262 0 2472 96 0 6 chr10 3177147 3177459 -142411829 - AluSq SINE Alu 0 313 4 279 53 0 26 chr10 3177857 3177895 -142411393 - L2 LINE L2 -15 3298 3262 255 154 0 0 chr10 3177862 3177901 -142411387 - MIR SINE MIR -13 249 211 * 1355 37 0 0 chr10 3178093 3178255 -142411033 - L1PA5 LINE L1 -2 6152 5991 215 31 31 0 chr10 3180084 3180116 -142409172 + (TCTA)n Simple_repeat Simple_repeat 2 34 0 22 0 0 0 chr10 3180178 3180200 -142409088 + AT_rich Low_complexity Low_complexity 1 22 0 836 161 0 0 chr10 3180200 3180324 -142408964 - AluJb SINE Alu -188 124 1 813 158 68 6 chr10 3180327 3180504 -142408784 - L1MB3 LINE L1 -45 6138 5951 257 276 0 0 chr10 3181123 3181181 -142408107 + (CA)n Simple_repeat Simple_repeat 1 58 0 500 243 112 67 chr10 3181347 3181660 -142407628 + HAL1b LINE L1 554 880 -468 2193 112 0 10 chr10 3181683 3181995 -142407293 + AluSc SINE Alu 1 309 0 21 0 0 0 chr10 3182060 3182081 -142407207 + AT_rich Low_complexity Low_complexity 1 21 0 2330 110 0 3 chr10 3182089 3182397 -142406891 + AluSx SINE Alu 1 307 -5 1119 114 16 22 chr10 3182502 3182686 -142406602 - MER30B DNA MER1_type -7 183 1 1665 157 54 0 chr10 3183296 3183467 -142405821 - AluJb SINE Alu -4 308 115 266 0 0 29 chr10 3183467 3183502 -142405786 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 1665 157 54 0 chr10 3183502 3183610 -142405678 - AluJb SINE Alu -197 115 14 1260 94 0 0 chr10 3183830 3184122 -142405166 + (TCCA)n Simple_repeat Simple_repeat 1 292 0 1234 116 0 9 chr10 3184135 3184495 -142404793 + (TCCA)n Simple_repeat Simple_repeat 1 536 0 306 0 0 0 chr10 3184495 3184529 -142404759 + (TCTA)n Simple_repeat Simple_repeat 1 34 0 835 144 34 0 chr10 3184529 3184675 -142404613 - L1MA9 LINE L1 0 6312 6162 395 152 29 0 chr10 3186568 3186673 -142402615 + (CACCAT)n Simple_repeat Simple_repeat 3 110 0 274 212 25 0 chr10 3186725 3186843 -142402445 + (CACCAT)n Simple_repeat Simple_repeat 2 122 0 228 325 0 0 chr10 3186860 3186943 -142402345 + (CAT)n Simple_repeat Simple_repeat 2 84 0 738 123 9 0 chr10 3186943 3187057 -142402231 - THE1C LTR MaLR 0 375 261 465 174 26 19 chr10 3189265 3189420 -142399868 + (ATGGTG)n Simple_repeat Simple_repeat 4 159 0 367 255 0 22 chr10 3189470 3189577 -142399711 + (ATGGTG)n Simple_repeat Simple_repeat 1 109 -450 1807 133 63 84 chr10 3189577 3189959 -142399329 + THE1C LTR MaLR 2 375 0 367 255 0 22 chr10 3189959 3190042 -142399246 + (ATGGTG)n Simple_repeat Simple_repeat 109 559 0 274 212 25 0 chr10 3190059 3190177 -142399111 + (ATGGTG)n Simple_repeat Simple_repeat 2 122 0 395 152 29 0 chr10 3190229 3190334 -142398954 + (ATGGTG)n Simple_repeat Simple_repeat 3 110 0 189 297 78 0 chr10 3190900 3190964 -142398324 - MIR SINE MIR -96 166 98 32 26 0 0 chr10 3191209 3191248 -142398040 + AT_rich Low_complexity Low_complexity 1 39 0 2478 85 0 3 chr10 3191473 3191780 -142397508 + AluSx SINE Alu 1 306 -6 313 203 63 76 chr10 3192678 3192836 -142396452 - L1MC5 LINE L1 -48 7913 7758 2094 132 0 0 chr10 3193090 3193403 -142395885 + AluSx SINE Alu 1 313 0 231 271 0 17 chr10 3193560 3193619 -142395669 - L2 LINE L2 -2 3270 3213 211 312 104 24 chr10 3194904 3195029 -142394259 - L2 LINE L2 -41 3231 3097 256 324 128 0 chr10 3195066 3195168 -142394120 - MIR SINE MIR -74 188 74 303 296 55 78 chr10 3195927 3196184 -142393104 + L1ME4a LINE L1 5839 6089 -32 267 330 78 0 chr10 3197408 3197511 -142391777 - MIR3 SINE MIR -5 203 93 2180 100 4 0 chr10 3198959 3199240 -142390048 - AluSg SINE Alu -12 298 17 808 139 29 40 chr10 3199447 3199620 -142389668 + MER53 DNA DNA 1 171 -18 2254 86 38 3 chr10 3200227 3200519 -142388769 + AluY SINE Alu 1 302 -9 435 248 62 25 chr10 3200531 3200692 -142388596 - MER96B DNA MER1_type? -151 266 100 22 0 0 0 chr10 3202774 3202796 -142386492 + AT_rich Low_complexity Low_complexity 1 22 0 358 289 58 16 chr10 3203975 3204096 -142385192 - MIR SINE MIR -116 146 21 2307 89 7 3 chr10 3204580 3204873 -142384415 + AluSp SINE Alu 1 294 -19 302 304 9 18 chr10 3205602 3205714 -142383574 + (CA)n Simple_repeat Simple_repeat 2 112 0 510 168 23 12 chr10 3205966 3206139 -142383149 + (TG)n Simple_repeat Simple_repeat 1 175 0 499 151 29 17 chr10 3206192 3206364 -142382924 + (TG)n Simple_repeat Simple_repeat 1 174 0 616 167 27 6 chr10 3206436 3206774 -142382514 + (TG)n Simple_repeat Simple_repeat 1 345 0 1102 117 43 0 chr10 3207342 3207505 -142381783 + AluSc SINE Alu 129 298 -11 207 324 15 0 chr10 3209823 3209891 -142379397 + (TCCA)n Simple_repeat Simple_repeat 4 72 0 2219 121 0 0 chr10 3210741 3211038 -142378250 + AluSx SINE Alu 1 297 -15 1752 197 0 10 chr10 3211648 3211958 -142377330 + AluJb SINE Alu 1 307 -5 2219 71 0 17 chr10 3214303 3214599 -142374689 + AluY SINE Alu 7 297 -14 310 362 29 49 chr10 3215709 3215952 -142373336 - MIR SINE MIR -10 252 15 200 167 0 0 chr10 3217290 3217320 -142371968 + polypurine Low_complexity Low_complexity 3 32 0 327 272 76 11 chr10 3217493 3217585 -142371703 + MIR SINE MIR 13 110 -152 1467 181 38 2 chr10 3217628 3217999 -142371289 - MER65A LTR ERV1 0 445 4 217 323 15 0 chr10 3217999 3218064 -142371224 + MIR SINE MIR 162 227 -35 552 287 184 17 chr10 3218207 3218555 -142370733 + MLT1J LTR MaLR 104 509 -2 600 227 41 23 chr10 3218968 3219140 -142370148 + MER5B DNA MER1_type 1 175 -3 315 179 269 0 chr10 3219157 3219235 -142370053 + MER5A DNA MER1_type 8 106 -83 263 300 50 0 chr10 3220475 3220555 -142368733 - L2 LINE L2 0 3313 3230 2086 184 21 7 chr10 3220812 3221242 -142368046 + L1MB3 LINE L1 5746 6181 -2 203 77 0 26 chr10 3221285 3221324 -142367964 + (TTTAA)n Simple_repeat Simple_repeat 3 40 0 1508 149 3 73 chr10 3221327 3221629 -142367659 - AluJo SINE Alu -31 281 1 394 222 176 0 chr10 3221986 3222094 -142367194 - FLAM_C SINE Alu -1 132 6 215 31 31 0 chr10 3222594 3222626 -142366662 + (TGG)n Simple_repeat Simple_repeat 1 33 0 1848 137 7 3 chr10 3222992 3223284 -142366004 + AluSx SINE Alu 1 293 -19 247 224 60 30 chr10 3223673 3223740 -142365548 + L2 LINE L2 3204 3272 0 1333 235 30 12 chr10 3223848 3224197 -142365091 - MLT1A1 LTR MaLR -6 359 1 2117 107 3 0 chr10 3224271 3224560 -142364728 - AluSx SINE Alu -21 291 2 3259 103 50 57 chr10 3228478 3229078 -142360210 - MER4A LTR ERV1 0 600 5 583 111 0 0 chr10 3229774 3229864 -142359424 - HERVFH19I LTR ERV1 -3634 4085 3996 529 335 44 7 chr10 3229903 3230196 -142359092 - L2 LINE L2 -1226 2088 1785 278 213 50 106 chr10 3230206 3230366 -142358922 - MLT1J1 LTR MaLR -3 443 293 261 233 17 0 chr10 3230485 3230545 -142358743 - MLT1J2 LTR MaLR -321 129 69 1115 235 44 65 chr10 3230565 3231023 -142358265 + MLT2B1 LTR ERVL 2 458 -6 186 261 81 45 chr10 3231073 3231184 -142358104 - L2 LINE L2 -1559 1755 1641 194 311 126 24 chr10 3231216 3231422 -142357866 - L2 LINE L2 -1669 1645 1419 781 156 0 0 chr10 3231667 3231825 -142357463 - FRAM SINE Alu 0 183 26 284 250 60 24 chr10 3233343 3233427 -142355861 + MARNA DNA Mariner 44 130 -456 2034 103 21 0 chr10 3233479 3233760 -142355528 - AluSx SINE Alu -3 309 23 253 145 43 43 chr10 3233789 3233858 -142355430 - MARNA DNA Mariner -234 352 284 390 69 0 0 chr10 3233895 3233953 -142355335 + (TG)n Simple_repeat Simple_repeat 1 58 0 3062 217 63 25 chr10 3234558 3235640 -142353648 + L1MD2 LINE L1 4906 6032 -327 1564 245 24 37 chr10 3235647 3236112 -142353176 - MLT1C LTR MaLR -1 466 8 525 261 20 7 chr10 3236216 3236369 -142352919 + L1MD2 LINE L1 6195 6349 -10 196 236 36 18 chr10 3238495 3238550 -142350738 - L2 LINE L2 -11 3302 3247 783 134 7 13 chr10 3238714 3238863 -142350425 + (TTCC)n Simple_repeat Simple_repeat 1 148 0 1544 168 13 42 chr10 3238863 3239173 -142350115 - AluJo SINE Alu -5 307 7 1014 106 99 0 chr10 3239199 3239350 -142349938 + AluSg/x SINE Alu 135 300 -12 588 309 55 4 chr10 3239827 3240063 -142349225 - MLT1H LTR MaLR -222 327 80 192 266 0 119 chr10 3240141 3240250 -142349038 - MIR SINE MIR -79 183 88 21 36 0 0 chr10 3240570 3240598 -142348690 + AT_rich Low_complexity Low_complexity 1 28 0 2053 122 3 0 chr10 3240599 3240895 -142348393 + AluSq SINE Alu 1 297 -16 350 324 19 69 chr10 3241036 3241252 -142348036 + L1ME LINE L1 5264 5468 -2340 275 277 99 45 chr10 3243358 3243560 -142345728 - MER112 DNA MER1_type -6 254 42 1856 160 0 6 chr10 3243659 3243971 -142345317 + AluSx SINE Alu 1 310 -2 38 22 0 0 chr10 3243992 3244037 -142345251 + AT_rich Low_complexity Low_complexity 1 45 0 245 164 0 18 chr10 3244092 3244147 -142345141 + CT-rich Low_complexity Low_complexity 3 56 0 26 0 0 0 chr10 3244152 3244178 -142345110 + AT_rich Low_complexity Low_complexity 1 26 0 243 222 173 49 chr10 3246051 3246132 -142343156 - MIR SINE MIR -48 214 124 2100 103 0 7 chr10 3246134 3246446 -142342842 + AluSx SINE Alu 1 310 0 2142 82 3 7 chr10 3249278 3249569 -142339719 - AluY SINE Alu -21 290 1 924 200 44 9 chr10 3249570 3249795 -142339493 + AluJo SINE Alu 59 291 -21 409 238 153 26 chr10 3249830 3250019 -142339269 + L1ME LINE L1 5573 5785 -336 585 163 65 8 chr10 3250632 3250755 -142338533 + FLAM_C SINE Alu 2 131 -12 320 203 27 0 chr10 3250763 3250837 -142338451 - L1MC2 LINE L1 -4 6340 6265 420 111 0 0 chr10 3251292 3251355 -142337933 + (TG)n Simple_repeat Simple_repeat 1 63 0 819 278 14 0 chr10 3252509 3252732 -142336556 + MLT1B LTR MaLR 8 233 -157 264 263 11 63 chr10 3252836 3252931 -142336357 - MER45A DNA AcHobo -50 128 39 819 207 6 11 chr10 3252957 3253131 -142336157 - AluJb SINE Alu 0 312 140 492 336 77 17 chr10 3253141 3253654 -142335634 + L2 LINE L2 2694 3305 -8 436 316 123 0 chr10 3254939 3254969 -142334319 + MIR SINE MIR 6 31 -231 2188 99 17 3 chr10 3254969 3255271 -142334017 + AluSg SINE Alu 1 306 -4 436 316 123 0 chr10 3255271 3255411 -142333877 + MIR SINE MIR 31 197 -65 281 243 9 75 chr10 3255776 3255883 -142333405 - MIR SINE MIR -55 207 108 279 0 0 0 chr10 3256055 3256086 -142333202 + (TG)n Simple_repeat Simple_repeat 1 31 0 189 0 0 0 chr10 3256497 3256518 -142332770 + (T)n Simple_repeat Simple_repeat 1 21 0 1882 133 0 13 chr10 3258239 3258548 -142330740 + AluSx SINE Alu 1 305 -7 1810 120 31 47 chr10 3259656 3259973 -142329315 - AluSx SINE Alu 0 312 1 698 223 171 0 chr10 3260208 3260401 -142328887 + L1PA16 LINE L1 5930 6155 -11 2086 159 48 17 chr10 3260445 3260860 -142328428 + MSTA LTR MaLR 1 428 0 1588 154 41 20 chr10 3261214 3261324 -142327964 + AluJo SINE Alu 1 107 -205 279 0 0 0 chr10 3261324 3261355 -142327933 + (CAA)n Simple_repeat Simple_repeat 3 33 0 1588 154 41 20 chr10 3261355 3261536 -142327752 + AluJo SINE Alu 107 298 -14 595 245 74 25 chr10 3262065 3262228 -142327060 - MIR SINE MIR -21 241 71 431 358 46 30 chr10 3262879 3263251 -142326037 + L1ME3A LINE L1 5558 5935 -235 2139 97 3 7 chr10 3264692 3264990 -142324298 - AluSx SINE Alu -15 297 1 1739 189 63 5 chr10 3265175 3265617 -142323671 + MLT2B1 LTR ERVL 3 520 0 300 219 183 29 chr10 3265724 3265861 -142323427 - L1MDb LINE L1 -4853 1689 1532 335 269 25 52 chr10 3265879 3265981 -142323307 - L1MDb LINE L1 -5089 1533 1430 2240 91 0 3 chr10 3265981 3266278 -142323010 - AluSc SINE Alu -13 296 1 335 269 25 52 chr10 3266278 3266355 -142322933 - L1MDb LINE L1 -5192 1430 1290 1872 184 26 13 chr10 3266997 3267382 -142321906 - MLT1B LTR MaLR 0 390 1 192 40 0 0 chr10 3267480 3267505 -142321783 + (TG)n Simple_repeat Simple_repeat 2 26 0 228 286 26 0 chr10 3268093 3268170 -142321118 + GA-rich Low_complexity Low_complexity 1 79 0 24 0 0 0 chr10 3269390 3269414 -142319874 + AT_rich Low_complexity Low_complexity 1 24 0 226 316 144 22 chr10 3270179 3270318 -142318970 + L2 LINE L2 3115 3270 -2 270 290 0 0 chr10 3270437 3270499 -142318789 - L2 LINE L2 -3 3310 3249 274 325 34 72 chr10 3270514 3270779 -142318509 - L2 LINE L2 -1407 1907 1653 1545 179 7 39 chr10 3270893 3271201 -142318087 - AluJo SINE Alu -14 298 1 296 364 125 32 chr10 3271417 3272010 -142317278 - L2 LINE L2 -2212 1102 455 377 227 68 0 chr10 3272038 3272126 -142317162 + MLT1A2 LTR MaLR 1 94 -280 1418 231 76 32 chr10 3272131 3272537 -142316751 + MER70A LTR ERVL 13 436 -36 417 202 11 11 chr10 3272775 3272864 -142316424 + MLT1A2 LTR MaLR 80 168 -206 2140 98 3 20 chr10 3272864 3273170 -142316118 + AluSx SINE Alu 1 301 -11 372 211 0 0 chr10 3273211 3273282 -142316006 + MLT1A2 LTR MaLR 285 355 -35 855 322 80 19 chr10 3274671 3275044 -142314244 + L2 LINE L2 2918 3313 0 276 284 102 24 chr10 3275097 3275224 -142314064 - MIR SINE MIR -74 188 52 209 221 34 0 chr10 3276334 3276456 -142312832 + CT-rich Low_complexity Low_complexity 1 126 0 226 301 72 0 chr10 3276547 3276630 -142312658 - Charlie1 DNA MER1_type -317 2444 2356 675 231 18 96 chr10 3276940 3277222 -142312066 + L1MD3 LINE L1 7035 7294 -701 243 224 0 79 chr10 3277236 3277312 -142311976 + MLT1F1 LTR MaLR 34 103 -464 608 231 62 0 chr10 3278693 3278853 -142310435 + L1MD3 LINE L1 7739 7908 -87 1190 101 0 0 chr10 3278882 3279050 -142310238 - AluY SINE Alu -9 302 135 251 167 45 15 chr10 3279051 3279117 -142310171 + L1MD3 LINE L1 7928 7995 0 183 269 185 0 chr10 3279282 3279390 -142309898 + MIR SINE MIR 91 218 -44 27 81 0 0 chr10 3280048 3280110 -142309178 + AT_rich Low_complexity Low_complexity 1 62 0 1549 173 13 26 chr10 3280162 3280468 -142308820 - AluJb SINE Alu -8 304 3 1813 125 7 27 chr10 3280779 3281075 -142308213 + AluSx SINE Alu 1 290 -22 4706 132 53 74 chr10 3282155 3283755 -142305533 - pTR5 LTR ERV1 -9 2429 63 268 313 61 30 chr10 3284834 3284965 -142304323 - Charlie8 DNA MER1_type -2274 143 9 2207 162 37 29 chr10 3284969 3285513 -142303775 + MLT2A2 LTR ERVL 1 554 0 1848 192 48 22 chr10 3285813 3286229 -142303059 + MSTC LTR MaLR 2 428 0 385 311 27 0 chr10 3286278 3286426 -142302862 + MER63A DNA MER1_type 51 202 -8 2296 68 7 7 chr10 3286575 3286884 -142302404 + AluSx SINE Alu 1 309 -3 562 203 101 34 chr10 3286937 3287085 -142302203 + MLT1C LTR MaLR 18 175 -292 1549 170 3 42 chr10 3288611 3288922 -142300366 - AluJb SINE Alu -11 301 3 1092 171 89 20 chr10 3289133 3289379 -142299909 + L1MA5 LINE L1 6038 6300 0 3318 236 75 35 chr10 3289382 3289603 -142299685 - L1MD2 LINE L1 -14 6345 6134 234 0 0 0 chr10 3289603 3289629 -142299659 + (TG)n Simple_repeat Simple_repeat 2 27 0 3318 236 75 35 chr10 3289629 3290738 -142298550 - L1MD2 LINE L1 -225 6134 4975 2335 162 2 2 chr10 3290832 3291240 -142298048 - L1MB3 LINE L1 -9 6174 5767 601 194 0 0 chr10 3291245 3291343 -142297945 + L1MB3 LINE L1 5652 5749 -422 1072 295 50 14 chr10 3291357 3291774 -142297514 - L1MD2 LINE L1 -1234 4912 4481 439 286 9 0 chr10 3291887 3291999 -142297289 - MER63A DNA MER1_type 0 210 98 423 175 35 9 chr10 3292062 3292176 -142297112 + CT-rich Low_complexity Low_complexity 1 117 0 1039 222 63 11 chr10 3292296 3292580 -142296708 + L1MA4 LINE L1 5999 6297 -3 203 387 50 0 chr10 3293710 3293829 -142295459 + L3b LINE CR1 1232 1356 -227 266 286 0 14 chr10 3294034 3294104 -142295184 + L3 LINE CR1 1504 1572 -5 1209 70 41 0 chr10 3295660 3295832 -142293456 - AluY SINE Alu 0 311 133 304 316 15 52 chr10 3296313 3296449 -142292839 - MIR SINE MIR -14 248 118 2962 187 25 33 chr10 3296455 3297098 -142292190 - LTR48B LTR ERV1 -3 641 4 1999 143 0 0 chr10 3297421 3297721 -142291567 - AluSx SINE Alu -12 300 1 208 283 0 33 chr10 3298368 3298428 -142290860 + CT-rich Low_complexity Low_complexity 3 60 0 240 295 85 16 chr10 3299733 3299862 -142289426 + MER45A DNA AcHobo 40 177 -1 190 370 54 0 chr10 3300068 3300160 -142289128 - MIR SINE MIR -123 139 43 1256 171 40 5 chr10 3300671 3300893 -142288395 + MER30 DNA MER1_type 1 230 0 1869 102 0 11 chr10 3301464 3301728 -142287560 - AluSq SINE Alu -52 261 1 349 233 33 0 chr10 3302191 3302281 -142287007 - MER103 DNA DNA -8 158 66 715 274 33 12 chr10 3302285 3302530 -142286758 - Charlie5 DNA MER1_type -28 2584 2335 245 192 0 3 chr10 3302544 3302637 -142286651 - AluY SINE Alu -177 125 1 1418 203 24 100 chr10 3304673 3305092 -142284196 + L1MB3 LINE L1 5364 5750 -421 1085 183 10 0 chr10 3305094 3305302 -142283986 + L1MB3 LINE L1 5973 6182 -1 191 283 50 17 chr10 3305467 3305527 -142283761 - L3 LINE CR1 -478 1099 1038 313 333 7 35 chr10 3305802 3305943 -142283345 - MIR3 SINE MIR -32 176 40 306 0 0 0 chr10 3306477 3306511 -142282777 + (CA)n Simple_repeat Simple_repeat 1 34 0 1349 215 20 27 chr10 3306689 3306987 -142282301 + AluJo SINE Alu 1 296 -6 36 40 0 0 chr10 3307012 3307062 -142282226 + AT_rich Low_complexity Low_complexity 1 50 0 2466 43 3 0 chr10 3307134 3307436 -142281852 + AluY SINE Alu 1 303 -8 1638 204 95 16 chr10 3308127 3308558 -142280730 + MER31B LTR ERV1 2 466 0 258 313 67 33 chr10 3308695 3308845 -142280443 - L2 LINE L2 -923 2391 2237 1799 239 25 15 chr10 3308959 3309431 -142279857 - MER90 LTR ERV1 -68 546 70 2058 115 13 10 chr10 3309598 3309902 -142279386 + AluSq SINE Alu 1 305 -8 21 0 0 0 chr10 3312642 3312663 -142276625 + AT_rich Low_complexity Low_complexity 1 21 0 1919 125 10 7 chr10 3313137 3313432 -142275856 + AluSx SINE Alu 1 296 -16 202 219 0 0 chr10 3313514 3313555 -142275733 - MIR3 SINE MIR -26 182 142 206 255 0 0 chr10 3314776 3314827 -142274461 + (TAAA)n Simple_repeat Simple_repeat 3 53 0 247 292 26 62 chr10 3315361 3315474 -142273814 + MIR SINE MIR 33 141 -67 341 203 123 88 chr10 3315662 3315720 -142273568 - ORSL DNA AcHobo -28 247 193 1859 129 0 0 chr10 3315720 3315983 -142273305 - AluSg SINE Alu -5 305 43 341 203 123 88 chr10 3315983 3316151 -142273137 - ORSL DNA AcHobo -82 193 13 188 283 0 0 chr10 3316190 3316250 -142273038 - L2 LINE L2 -58 3255 3196 3852 194 27 17 chr10 3316926 3317750 -142271538 - L1MB3 LINE L1 -1 6182 5351 2779 97 5 0 chr10 3317845 3318218 -142271070 + THE1C LTR MaLR 1 375 0 223 290 65 32 chr10 3318419 3318512 -142270776 - MIR3 SINE MIR -110 98 3 426 195 18 9 chr10 3319711 3319824 -142269464 + CT-rich Low_complexity Low_complexity 1 114 0 207 100 0 0 chr10 3319843 3319873 -142269415 + (TTCC)n Simple_repeat Simple_repeat 4 33 0 210 369 9 27 chr10 3320473 3320584 -142268704 - MIR3 SINE MIR -93 115 7 2051 136 147 8 chr10 3321171 3321545 -142267743 - MSTA LTR MaLR -2 426 1 1309 214 79 25 chr10 3321819 3322175 -142267113 + MER74A LTR ERVL 151 525 -33 252 0 0 0 chr10 3322426 3322454 -142266834 + (TTTA)n Simple_repeat Simple_repeat 4 31 0 1789 159 3 29 chr10 3322650 3322959 -142266329 - AluJo SINE Alu -11 301 1 2637 106 0 8 chr10 3324207 3324574 -142264714 + THE1B LTR MaLR 1 364 0 3068 171 147 71 chr10 3324576 3325350 -142263938 + THE1B-int LTR MaLR 3 835 -816 1026 116 0 14 chr10 3325350 3325496 -142263792 + THE1B LTR MaLR 221 364 0 1572 205 61 23 chr10 3326905 3327334 -142261954 - Charlie1b DNA MER1_type 0 523 79 2314 99 0 3 chr10 3327595 3327889 -142261399 - AluSq SINE Alu -20 293 1 55 65 0 43 chr10 3330475 3330660 -142258628 + AT_rich Low_complexity Low_complexity 1 177 0 22 0 0 0 chr10 3330699 3330721 -142258567 + AT_rich Low_complexity Low_complexity 1 22 0 1992 124 7 3 chr10 3330819 3331138 -142258150 - AluSx SINE Alu 0 320 1 384 244 23 74 chr10 3332016 3332192 -142257096 + MER5A DNA MER1_type 14 180 -9 539 190 84 39 chr10 3332375 3332554 -142256734 - MER5A DNA MER1_type -2 187 1 2310 112 0 6 chr10 3332982 3333296 -142255992 + AluSq SINE Alu 1 312 -1 21 0 0 0 chr10 3333627 3333648 -142255640 + AT_rich Low_complexity Low_complexity 1 21 0 1327 145 30 98 chr10 3333794 3334131 -142255157 - L1MB8 LINE L1 -4 6174 5861 1276 225 39 0 chr10 3334133 3334440 -142254848 - L1MC3 LINE L1 0 7785 7467 1199 174 9 0 chr10 3334452 3334671 -142254617 - L1MA8 LINE L1 -1 6290 6070 2108 195 49 117 chr10 3334811 3335149 -142254139 - LTR8A LTR ERV1 0 727 464 3241 77 9 2 chr10 3335149 3335577 -142253711 + L1PA7 LINE L1 5722 6152 -2 2108 195 49 117 chr10 3335577 3335976 -142253312 - LTR8A LTR ERV1 -263 464 40 247 289 96 7 chr10 3337134 3337269 -142252019 + MIR3 SINE MIR 44 190 -18 323 183 12 0 chr10 3339137 3339219 -142250069 + CT-rich Low_complexity Low_complexity 2 84 0 299 221 206 29 chr10 3339661 3339797 -142249491 + Ricksha DNA DNA 136 295 -959 * 844 175 0 7 chr10 3339787 3339941 -142249347 + Ricksha DNA DNA 1692 1844 -1402 2915 218 30 21 chr10 3339989 3340649 -142248639 + Ricksha DNA DNA 1819 2484 -762 * 3401 209 56 27 chr10 3340632 3341524 -142247764 + Ricksha DNA DNA 2318 3235 -11 293 109 18 0 chr10 3341580 3341635 -142247653 + (CA)n Simple_repeat Simple_repeat 1 56 0 263 226 75 21 chr10 3341690 3341783 -142247505 + MER45A DNA AcHobo 80 177 -1 261 0 0 0 chr10 3343878 3343907 -142245381 + (T)n Simple_repeat Simple_repeat 1 29 0 2024 128 3 13 chr10 3344466 3344772 -142244516 + AluSx SINE Alu 1 303 -9 1576 192 78 19 chr10 3345087 3345457 -142243831 + MSTD LTR MaLR 1 392 -4 516 156 0 0 chr10 3345503 3345593 -142243695 + GA-rich Low_complexity Low_complexity 3 92 0 583 170 6 33 chr10 3345724 3345906 -142243382 + GA-rich Low_complexity Low_complexity 2 178 0 2280 209 20 8 chr10 3346263 3346757 -142242531 + L1MB8 LINE L1 5505 6004 -174 315 267 72 44 chr10 3346766 3346946 -142242342 - LTR16B LTR ERVL -160 304 120 445 145 0 0 chr10 3347513 3347582 -142241706 - L1PB1 LINE L1 -249 5902 5834 1556 120 8 4 chr10 3347582 3347817 -142241471 + L1PB1 LINE L1 5908 6149 -2 385 223 36 36 chr10 3348253 3348365 -142240923 - MER69 DNA AcHobo -2414 112 1 3279 233 33 20 chr10 3348824 3348949 -142240339 + L1ME1 LINE L1 5158 5280 -886 180 77 0 0 chr10 3348949 3348975 -142240313 + (CA)n Simple_repeat Simple_repeat 2 27 0 3279 233 33 20 chr10 3348975 3349789 -142239499 + L1ME1 LINE L1 5280 6110 -56 2163 114 3 22 chr10 3351041 3351356 -142237932 + AluSg SINE Alu 1 309 -1 615 247 57 98 chr10 3351466 3352009 -142237279 + L1MC5 LINE L1 7391 7911 -50 265 383 8 8 chr10 3352110 3352238 -142237050 + MIR SINE MIR 19 146 -116 1209 238 57 25 chr10 3352662 3353015 -142236273 - MLT1A1 LTR MaLR 0 365 2 342 61 0 0 chr10 3353234 3353283 -142236005 + (CA)n Simple_repeat Simple_repeat 2 50 0 284 369 17 0 chr10 3354903 3355029 -142234259 + MIR SINE MIR 37 162 -65 621 72 0 0 chr10 3355060 3355143 -142234145 + (GGAA)n Simple_repeat Simple_repeat 2 84 0 320 182 55 9 chr10 3355154 3355264 -142234024 + GA-rich Low_complexity Low_complexity 3 117 0 276 30 0 0 chr10 3357065 3357098 -142232190 + (CA)n Simple_repeat Simple_repeat 2 34 0 2883 146 8 22 chr10 3357355 3357854 -142231434 + L1MA8 LINE L1 5629 6120 -171 995 261 35 17 chr10 3358205 3358492 -142230796 - MLT1E LTR MaLR 0 593 302 246 371 59 6 chr10 3359859 3360029 -142229259 - MIR SINE MIR -57 205 27 457 271 66 7 chr10 3360426 3360577 -142228711 + MLT1A2 LTR MaLR 1 160 -214 273 200 93 7 chr10 3360720 3360863 -142228425 + MLT1B LTR MaLR 16 179 -211 395 149 14 0 chr10 3360885 3360959 -142228329 + CT-rich Low_complexity Low_complexity 1 75 0 749 245 7 4 chr10 3360982 3361179 -142228109 + MLT1B LTR MaLR 173 383 -7 423 288 16 8 chr10 3361232 3361357 -142227931 + L2 LINE L2 3141 3266 -6 205 319 26 35 chr10 3361415 3361528 -142227760 - MIR SINE MIR -62 146 35 1954 110 37 0 chr10 3362381 3362684 -142226604 - AluSx SINE Alu 0 313 1 254 281 31 0 chr10 3362857 3362953 -142226335 - MER5A DNA MER1_type -6 183 85 219 204 0 0 chr10 3363208 3363257 -142226031 + (TG)n Simple_repeat Simple_repeat 1 49 0 645 196 0 33 chr10 3363268 3363452 -142225836 + (TG)n Simple_repeat Simple_repeat 2 179 0 2170 100 4 0 chr10 3364523 3364804 -142224484 + AluSq SINE Alu 1 282 -31 210 71 0 0 chr10 3364809 3364837 -142224451 + (GGGGA)n Simple_repeat Simple_repeat 5 32 0 1476 191 32 45 chr10 3365377 3365755 -142223533 - MER93b LTR ERV1 0 373 1 1287 210 34 92 chr10 3367793 3368004 -142221284 - MER57A LTR ERV1 -1 402 225 2133 115 0 0 chr10 3368004 3368308 -142220980 - AluSx SINE Alu -8 304 1 1287 210 34 92 chr10 3368308 3368510 -142220778 - MER57A LTR ERV1 -178 225 13 26 0 0 0 chr10 3368919 3368945 -142220343 + AT_rich Low_complexity Low_complexity 1 26 0 297 287 128 14 chr10 3369013 3369200 -142220088 - MIR SINE MIR -46 216 17 263 233 0 58 chr10 3369743 3369829 -142219459 + LTR29 LTR ERV1 1 81 -541 * 1430 210 98 36 chr10 3369820 3370239 -142219049 + MER39 LTR ERV1 260 704 -3 262 339 64 35 chr10 3370258 3370429 -142218859 - MIR SINE MIR -31 231 56 228 67 0 0 chr10 3372419 3372449 -142216839 + (GGA)n Simple_repeat Simple_repeat 1 30 0 266 280 13 0 chr10 3373343 3373418 -142215870 + (CA)n Simple_repeat Simple_repeat 1 76 0 1306 194 36 12 chr10 3373833 3373986 -142215302 + MLT1A1 LTR MaLR 1 165 -200 2210 85 0 0 chr10 3373986 3374287 -142215001 + AluY SINE Alu 1 301 0 1306 194 36 12 chr10 3374287 3374384 -142214904 + MLT1A1 LTR MaLR 165 258 -107 784 134 0 0 chr10 3374519 3374631 -142214657 + MLT1A1 LTR MaLR 254 365 0 305 315 91 17 chr10 3376490 3376731 -142212557 + LTR16B LTR ERVL 194 452 -12 1800 159 0 3 chr10 3376799 3377095 -142212193 + AluJo SINE Alu 1 295 -17 1950 104 11 0 chr10 3377242 3377563 -142211725 + AluSp SINE Alu 1 313 0 1416 233 29 11 chr10 3377721 3378103 -142211185 + MLT1B LTR MaLR 1 389 -1 1156 246 81 0 chr10 3379049 3379382 -142209906 - MLT1B LTR MaLR -24 366 7 27 73 0 0 chr10 3380739 3380794 -142208494 + AT_rich Low_complexity Low_complexity 1 55 0 270 81 0 0 chr10 3381688 3381725 -142207563 + (T)n Simple_repeat Simple_repeat 1 37 0 309 269 46 9 chr10 3381863 3381971 -142207317 - MER5A DNA MER1_type -77 112 1 204 298 0 0 chr10 3382187 3382244 -142207044 + MIR SINE MIR 20 76 -186 264 112 73 47 chr10 3382497 3382733 -142206555 + (TAGA)n Simple_repeat Simple_repeat 1 242 0 299 322 35 53 chr10 3384251 3384422 -142204866 + MIR SINE MIR 25 192 -70 2155 94 10 0 chr10 3385799 3386098 -142203190 - AluSg SINE Alu -8 302 1 21 0 0 0 chr10 3388543 3388564 -142200724 + AT_rich Low_complexity Low_complexity 1 21 0 246 271 0 17 chr10 3388740 3388799 -142200489 - MIR SINE MIR -88 174 117 1910 167 7 66 chr10 3390778 3391186 -142198102 + MLT1B LTR MaLR 1 384 -6 2154 108 7 7 chr10 3391427 3391732 -142197556 - AluSx SINE Alu -7 305 1 297 292 42 0 chr10 3391743 3391839 -142197449 + LTR67 LTR ERVL 458 557 0 2614 147 36 74 chr10 3391985 3392367 -142196921 + LTR26B LTR ERV1 1 359 -172 1894 123 14 0 chr10 3392367 3392670 -142196618 + AluSx SINE Alu 1 307 0 2614 147 36 74 chr10 3392670 3392836 -142196452 + LTR26B LTR ERV1 359 530 -1 330 316 83 26 chr10 3393732 3393925 -142195363 + MIR SINE MIR 24 227 -35 270 0 0 0 chr10 3395963 3395993 -142193295 + (TC)n Simple_repeat Simple_repeat 1 30 0 207 0 0 0 chr10 3395992 3396015 -142193273 + (CA)n Simple_repeat Simple_repeat 1 23 0 * 234 300 0 25 chr10 3396053 3396133 -142193155 + MIR SINE MIR 166 243 -19 267 103 0 0 chr10 3396141 3396180 -142193108 + (TG)n Simple_repeat Simple_repeat 2 40 0 1907 119 20 0 chr10 3396549 3396842 -142192446 - AluSx SINE Alu -13 299 1 1788 94 11 34 chr10 3397535 3397800 -142191488 - AluSg SINE Alu -16 294 36 3004 198 57 58 chr10 3398340 3399185 -142190103 + L1MB8 LINE L1 5335 6178 0 573 42 0 0 chr10 3400241 3400313 -142188975 + (TC)n Simple_repeat Simple_repeat 1 72 0 1912 179 40 71 chr10 3401054 3401367 -142187921 - MLT1D LTR MaLR -3 502 209 2107 42 4 11 chr10 3401367 3401651 -142187637 - AluY SINE Alu 0 300 19 1912 179 40 71 chr10 3401651 3401854 -142187434 - MLT1D LTR MaLR -296 209 1 274 278 119 61 chr10 3401856 3402133 -142187155 + L1ME4a LINE L1 5501 5801 -320 1674 240 87 23 chr10 3402133 3402662 -142186626 - MLT1F1 LTR MaLR 0 567 5 274 278 119 61 chr10 3402662 3402779 -142186509 + L1ME4a LINE L1 5801 5910 -211 730 266 22 3 chr10 3402982 3403168 -142186120 + MIR SINE MIR 1 190 -18 308 352 72 0 chr10 3403142 3403267 -142186021 - MER5B DNA MER1_type -44 134 1 * 2587 36 0 0 chr10 3403518 3403821 -142185467 + AluYa5 SINE Alu 1 303 -8 371 180 0 90 chr10 3404354 3404443 -142184845 - MIR3 SINE MIR -2 206 126 1276 198 36 71 chr10 3404828 3405136 -142184152 - AluSx SINE Alu -5 297 1 4271 192 23 9 chr10 3405144 3406019 -142183269 - L1MC3 LINE L1 -3 7782 5444 232 69 0 0 chr10 3406553 3406582 -142182706 - MER4B LTR ERV1 0 610 582 4144 107 0 88 chr10 3406588 3407316 -142181972 - MER4A LTR ERV1 0 664 1 253 277 130 48 chr10 3407614 3407816 -142181472 - MIR SINE MIR -11 251 17 29 0 0 0 chr10 3407816 3407845 -142181443 + AT_rich Low_complexity Low_complexity 1 29 0 304 247 88 71 chr10 3409296 3409466 -142179822 - LTR48 LTR ERV1 -2 785 613 515 207 41 130 chr10 3409587 3409833 -142179455 - MER34C LTR ERV1 -321 264 41 2427 80 0 3 chr10 3409922 3410233 -142179055 + AluSx SINE Alu 3 312 0 303 288 120 33 chr10 3410843 3411027 -142178261 - MIR SINE MIR 0 262 63 25 0 0 0 chr10 3411044 3411069 -142178219 + AT_rich Low_complexity Low_complexity 1 25 0 7503 199 15 21 chr10 3411084 3413632 -142175656 - L1MA10 LINE L1 0 6334 3800 230 203 0 17 chr10 3413700 3413759 -142175529 + CT-rich Low_complexity Low_complexity 3 60 0 218 105 26 0 chr10 3415862 3415900 -142173388 + (TTA)n Simple_repeat Simple_repeat 1 39 0 333 308 56 43 chr10 3416483 3416805 -142172483 + MER46C DNA MER2_type 11 336 -2 2281 116 6 0 chr10 3417047 3417358 -142171930 + AluSq SINE Alu 1 313 0 2134 104 27 0 chr10 3417522 3417819 -142171469 - AluSx SINE Alu -2 310 6 21 0 0 0 chr10 3418266 3418287 -142171001 + AT_rich Low_complexity Low_complexity 1 21 0 384 191 0 0 chr10 3419110 3419194 -142170094 + (CA)n Simple_repeat Simple_repeat 1 84 0 208 339 0 33 chr10 3420263 3420443 -142168845 + (CACG)n Simple_repeat Simple_repeat 4 177 0 275 317 0 33 chr10 3420678 3420858 -142168430 + (CACG)n Simple_repeat Simple_repeat 4 177 0 252 176 0 157 chr10 3422284 3422386 -142166902 + LTR46-int LTR ERV1 525 610 -6375 2325 89 0 10 chr10 3422770 3423072 -142166216 + AluY SINE Alu 2 300 -11 1648 173 0 31 chr10 3423073 3423362 -142165926 + AluSx SINE Alu 17 296 -16 803 131 31 8 chr10 3423513 3423643 -142165645 - FLAM_C SINE Alu 0 133 1 1371 283 74 20 chr10 3425289 3425777 -142163511 - LTR40a LTR ERVL 0 519 6 407 300 29 14 chr10 3426415 3426555 -142162733 + MLT1J1 LTR MaLR 64 205 -241 1376 215 101 46 chr10 3427012 3427450 -142161838 - MER31B LTR ERV1 0 466 5 466 216 166 14 chr10 3427765 3427904 -142161384 - MER58B DNA MER1_type -1 340 181 949 240 103 39 chr10 3427954 3428342 -142160946 + LTR37A LTR ERV1 13 425 -1 2381 80 0 46 chr10 3429788 3430114 -142159174 - AluY SINE Alu 0 311 1 270 268 32 16 chr10 3430252 3430375 -142158913 + (TA)n Simple_repeat Simple_repeat 1 125 0 988 75 14 7 chr10 3432398 3432545 -142156743 + (TTTC)n Simple_repeat Simple_repeat 2 149 0 865 215 178 24 chr10 3433418 3433635 -142155653 + MER2 DNA MER2_type 1 278 -66 2082 141 0 0 chr10 3433635 3433933 -142155355 - AluSx SINE Alu -14 298 1 865 215 178 24 chr10 3433933 3434013 -142155275 + MER2 DNA MER2_type 278 344 0 422 207 58 0 chr10 3434328 3434415 -142154873 - MER2 DNA MER2_type -200 145 54 837 38 0 0 chr10 3434419 3434524 -142154764 + (GA)n Simple_repeat Simple_repeat 1 105 0 2171 113 24 0 chr10 3434650 3434943 -142154345 + AluSq SINE Alu 1 300 -13 225 317 52 57 chr10 3437336 3437566 -142151722 - L1MCc LINE L1 -6176 247 19 1875 154 34 0 chr10 3437625 3437747 -142151541 + AluSx SINE Alu 1 117 -195 240 35 0 0 chr10 3437747 3437776 -142151512 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 1875 154 34 0 chr10 3437776 3437946 -142151342 + AluSx SINE Alu 117 303 -9 23 0 0 0 chr10 3437952 3437975 -142151313 + AT_rich Low_complexity Low_complexity 1 23 0 535 168 35 0 chr10 3439236 3439349 -142149939 - MER96B DNA MER1_type? -50 367 251 434 324 50 16 chr10 3439569 3439751 -142149537 + MIR SINE MIR 75 262 0 207 214 0 0 chr10 3439751 3439793 -142149495 + (TTG)n Simple_repeat Simple_repeat 2 43 0 180 252 29 68 chr10 3440661 3440764 -142148524 - L2 LINE L2 -250 3022 2924 212 364 8 8 chr10 3441475 3441593 -142147695 - L2 LINE L2 -1 3312 3195 493 226 36 67 chr10 3442392 3442587 -142146701 + LTR33 LTR ERVL 19 207 -314 257 295 60 34 chr10 3442720 3442869 -142146419 + LTR33 LTR ERVL 367 519 -2 275 264 130 0 chr10 3443949 3444051 -142145237 + MIR SINE MIR 45 157 -62 644 230 11 59 chr10 3444482 3444669 -142144619 + MER5B DNA MER1_type 1 178 0 182 289 121 12 chr10 3445038 3445121 -142144167 + L2 LINE L2 3184 3275 -38 1870 183 21 18 chr10 3445132 3445521 -142143767 - MLT1B LTR MaLR 0 390 1 1649 156 7 40 chr10 3446662 3446963 -142142325 + AluJb SINE Alu 1 291 -21 404 293 0 43 chr10 3446981 3447169 -142142119 + (TATATG)n Simple_repeat Simple_repeat 1 180 0 446 297 11 34 chr10 3447197 3447372 -142141916 + (TATG)n Simple_repeat Simple_repeat 1 171 0 264 77 0 0 chr10 3449911 3449950 -142139338 + (CA)n Simple_repeat Simple_repeat 1 39 0 266 25 0 50 chr10 3449966 3450006 -142139282 + (GAAAA)n Simple_repeat Simple_repeat 3 40 0 1557 205 15 36 chr10 3450673 3451009 -142138279 + MLT1A1 LTR MaLR 4 332 -33 303 290 153 0 chr10 3451299 3451423 -142137865 - MIR SINE MIR -14 248 106 2245 153 33 2 chr10 3451992 3452385 -142136903 - L1M2 LINE L1 -558 5742 5338 3378 141 36 10 chr10 3452385 3452820 -142136468 + L1MA4 LINE L1 5698 6154 -146 2334 116 36 30 chr10 3452820 3453182 -142136106 + THE1B LTR MaLR 1 364 0 3378 141 36 10 chr10 3453182 3453325 -142135963 + L1MA4 LINE L1 6154 6292 -8 731 169 15 0 chr10 3453351 3453487 -142135801 + L1MA4 LINE L1 6163 6300 0 2269 152 93 0 chr10 3454065 3454474 -142134814 + LTR47A LTR ERVL 6 452 0 266 339 0 8 chr10 3454615 3454742 -142134546 + MIR SINE MIR 96 221 -41 2154 158 26 16 chr10 3455190 3455576 -142133712 + L1PA15 LINE L1 5774 6163 -2 247 130 0 0 chr10 3455671 3455717 -142133571 + L1MC4 LINE L1 6658 6703 -1339 207 225 0 0 chr10 3455718 3455758 -142133530 + (TA)n Simple_repeat Simple_repeat 1 40 0 21 0 0 0 chr10 3455978 3455999 -142133289 + AT_rich Low_complexity Low_complexity 1 21 0 270 343 30 35 chr10 3456024 3456225 -142133063 + MIR SINE MIR 15 214 -48 2052 123 3 3 chr10 3458699 3458991 -142130297 - AluSx SINE Alu -20 292 1 22 0 0 0 chr10 3459541 3459563 -142129725 + AT_rich Low_complexity Low_complexity 1 22 0 368 265 0 0 chr10 3460461 3460544 -142128744 - MLT1D LTR MaLR -389 116 34 2987 283 76 50 chr10 3460544 3463107 -142126181 + L1ME3A LINE L1 3346 5990 -180 1676 143 20 61 chr10 3463107 3463432 -142125856 - AluJb SINE Alu 0 313 1 2987 283 76 50 chr10 3463432 3463572 -142125716 + L1ME3A LINE L1 5990 6125 -45 25 0 0 0 chr10 3463701 3463726 -142125562 + AT_rich Low_complexity Low_complexity 1 25 0 2176 119 17 0 chr10 3464868 3465170 -142124118 + AluSq SINE Alu 1 307 -6 28 29 0 0 chr10 3465866 3465901 -142123387 + AT_rich Low_complexity Low_complexity 1 35 0 337 310 150 0 chr10 3467567 3467680 -142121608 + MIR SINE MIR 63 192 -70 2188 90 3 26 chr10 3468078 3468390 -142120898 + AluSp SINE Alu 1 305 -8 479 331 96 11 chr10 3468483 3468661 -142120627 + MIR3 SINE MIR 10 202 -6 2007 107 0 0 chr10 3468920 3469223 -142120065 + AluSx SINE Alu 12 314 0 2170 122 0 0 chr10 3469375 3469679 -142119609 + AluSx SINE Alu 1 304 -8 306 262 192 77 chr10 3470457 3470743 -142118545 - MLT1E1 LTR MaLR -23 631 313 4195 76 53 32 chr10 3471182 3471472 -142117816 + L1PB1 LINE L1 5522 5804 -347 369 0 0 0 chr10 3471472 3471513 -142117775 + (CA)n Simple_repeat Simple_repeat 1 41 0 4195 76 53 32 chr10 3471513 3471839 -142117449 + L1PB1 LINE L1 5804 6151 0 1844 237 59 13 chr10 3471873 3472328 -142116960 + MLT1D LTR MaLR 13 488 -17 3520 218 36 139 chr10 3472348 3473874 -142115414 + MLT1D-int LTR MaLR 3 1371 0 1040 228 25 22 chr10 3473874 3474150 -142115138 + MLT1D LTR MaLR 1 277 -228 1414 171 74 119 chr10 3474157 3474784 -142114504 + LTR49 LTR ERV1 5 565 0 1016 228 50 0 chr10 3474784 3475003 -142114285 + MLT1D LTR MaLR 276 505 0 2267 68 0 42 chr10 3476270 3476577 -142112711 - AluY SINE Alu -13 298 5 486 272 18 0 chr10 3476989 3477103 -142112185 + MIR SINE MIR 97 212 -50 2218 117 39 28 chr10 3477263 3477623 -142111665 + THE1B LTR MaLR 1 364 0 2262 59 28 0 chr10 3479184 3479473 -142109815 - AluY SINE Alu -14 297 1 2315 119 14 6 chr10 3481214 3481566 -142107722 + THE1A LTR MaLR 1 355 0 2032 124 10 3 chr10 3483435 3483741 -142105547 - AluSq SINE Alu -5 308 1 836 308 198 14 chr10 3486301 3486805 -142102483 - L2 LINE L2 -599 2715 2119 22 0 0 0 chr10 3487623 3487645 -142101643 + AT_rich Low_complexity Low_complexity 1 22 0 1823 138 0 43 chr10 3487700 3488005 -142101283 + AluSx SINE Alu 1 292 -20 5618 129 19 2 chr10 3488241 3489453 -142099835 + L1PB3 LINE L1 4926 6154 0 21 71 0 0 chr10 3491193 3491235 -142098053 + AT_rich Low_complexity Low_complexity 1 42 0 2274 82 0 0 chr10 3492225 3492519 -142096769 - AluSg SINE Alu -16 294 1 539 309 29 24 chr10 3494670 3494916 -142094372 - L3 LINE CR1 -190 1387 1141 288 346 26 19 chr10 3495374 3495530 -142093758 + (TATATG)n Simple_repeat Simple_repeat 1 157 0 * 426 354 17 0 chr10 3495467 3495642 -142093646 + (TG)n Simple_repeat Simple_repeat 1 178 0 309 117 81 18 chr10 3496073 3496184 -142093104 + (CTATA)n Simple_repeat Simple_repeat 3 120 0 189 94 0 0 chr10 3497650 3497682 -142091606 + (CCCTAA)n Simple_repeat Simple_repeat 2 33 0 22 0 0 0 chr10 3498629 3498651 -142090637 + AT_rich Low_complexity Low_complexity 1 22 0 489 273 169 7 chr10 3500249 3500403 -142088885 - MIR SINE MIR -45 217 39 407 217 111 40 chr10 3501556 3501739 -142087549 - MIR SINE MIR -17 245 48 213 39 0 0 chr10 3501757 3501783 -142087505 + (CAG)n Simple_repeat Simple_repeat 3 28 0 1061 260 101 9 chr10 3503715 3504061 -142085227 - MLT1B LTR MaLR -12 378 1 376 339 60 50 chr10 3504646 3504997 -142084291 - L1ME4a LINE L1 -269 5852 5493 347 56 19 0 chr10 3504997 3505051 -142084237 + (CA)n Simple_repeat Simple_repeat 2 56 0 376 339 60 50 chr10 3505051 3505183 -142084105 - L1ME4a LINE L1 -628 5493 5364 403 273 53 33 chr10 3505599 3505749 -142083539 - L1ME4a LINE L1 -1111 5035 4883 2075 148 48 31 chr10 3506272 3506630 -142082658 + THE1B LTR MaLR 1 364 0 275 233 17 0 chr10 3506835 3506895 -142082393 + MLT1A1 LTR MaLR 2 62 -366 638 263 80 77 chr10 3506930 3507204 -142082084 + MLT1A1 LTR MaLR 80 354 -11 2274 159 36 31 chr10 3508428 3508976 -142080312 - MLT2A2 LTR ERVL 0 554 1 189 333 23 23 chr10 3508976 3509063 -142080225 - MIR SINE MIR -148 114 28 333 47 0 0 chr10 3509504 3509547 -142079741 + (TTA)n Simple_repeat Simple_repeat 3 45 0 7230 51 1 1 chr10 3509548 3511094 -142078194 - L1PA5 LINE L1 -16 6138 4597 1617 136 19 0 chr10 3513253 3513518 -142075770 - L1MA8 LINE L1 -28 6263 5994 803 99 8 0 chr10 3513768 3513889 -142075399 - AluSg/x SINE Alu -13 299 178 293 237 45 128 chr10 3513912 3514068 -142075220 + MIR SINE MIR 47 189 -73 1961 53 32 0 chr10 3514549 3514796 -142074492 + L1PA7 LINE L1 5900 6154 0 23 0 0 0 chr10 3515080 3515103 -142074185 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr10 3517027 3517055 -142072233 + AT_rich Low_complexity Low_complexity 1 28 0 333 0 0 0 chr10 3517601 3517638 -142071650 + (TTA)n Simple_repeat Simple_repeat 3 39 0 1542 50 0 0 chr10 3517638 3517819 -142071469 - L1PA3 LINE L1 -18 6137 5957 871 177 0 0 chr10 3518336 3518477 -142070811 - AluJb SINE Alu -32 280 140 664 247 67 109 chr10 3518579 3518595 -142070693 - L1MC5 LINE L1 -87 7874 7859 2352 67 3 0 chr10 3518595 3518878 -142070410 - AluSp SINE Alu -29 284 1 664 247 67 109 chr10 3518878 3519427 -142069861 - L1MC5 LINE L1 -102 7859 7333 472 198 108 0 chr10 3519431 3519542 -142069746 + Charlie5 DNA MER1_type 2 124 -2488 1348 197 72 40 chr10 3519542 3519918 -142069370 + Charlie5 DNA MER1_type 2236 2623 0 245 118 0 0 chr10 3520517 3520551 -142068737 + HSMAR1 DNA Mariner 1 34 -1253 789 272 48 97 chr10 3520569 3521136 -142068152 - L1MC5 LINE L1 -812 7149 6611 29 47 0 0 chr10 3521175 3521218 -142068070 + AT_rich Low_complexity Low_complexity 1 43 0 2361 100 0 3 chr10 3521506 3521816 -142067472 - AluSg SINE Alu -1 309 1 225 204 19 48 chr10 3523643 3523746 -142065542 + (TTATA)n Simple_repeat Simple_repeat 4 103 0 4698 36 0 0 chr10 3524334 3524858 -142064430 + L1PA5 LINE L1 5629 6152 -2 398 248 57 0 chr10 3525323 3525464 -142063824 - MER103 DNA DNA -14 152 4 2025 145 0 7 chr10 3525490 3525794 -142063494 - AluSx SINE Alu -10 302 1 265 331 0 8 chr10 3526056 3526183 -142063105 + (TA)n Simple_repeat Simple_repeat 1 126 0 412 270 25 17 chr10 3526398 3526582 -142062706 + L1ME LINE L1 5478 5575 -546 1845 162 3 19 chr10 3526631 3526946 -142062342 - AluSx SINE Alu -2 310 1 265 296 56 38 chr10 3527527 3527726 -142061562 + L1ME LINE L1 5686 5825 -296 200 332 179 11 chr10 3528107 3528297 -142060991 + MIR SINE MIR 27 248 -14 282 29 0 0 chr10 3528450 3528485 -142060803 + (TG)n Simple_repeat Simple_repeat 2 36 0 323 264 90 42 chr10 3528497 3528641 -142060647 - MLT2B2 LTR ERVL -81 434 284 * 614 203 50 51 chr10 3528616 3528818 -142060470 - MLT2B1 LTR ERVL -255 209 1 26 64 0 0 chr10 3528881 3528928 -142060360 + AT_rich Low_complexity Low_complexity 1 47 0 3458 149 10 0 chr10 3528943 3529452 -142059836 + MER75 DNA T2_type 1 514 0 496 251 175 54 chr10 3529553 3529907 -142059381 + MLT1H LTR MaLR 117 513 -36 1663 172 31 0 chr10 3530120 3530411 -142058877 - AluJb SINE Alu -6 306 7 563 273 20 0 chr10 3532188 3532338 -142056950 + MER58B DNA MER1_type 185 337 -4 581 123 123 0 chr10 3533078 3533192 -142056096 + L1MA4 LINE L1 6169 6296 -4 306 319 8 0 chr10 3533358 3533477 -142055811 - MER45A DNA AcHobo 0 178 59 549 264 17 17 chr10 3535045 3535223 -142054065 - MER45A DNA AcHobo 0 178 1 210 308 125 42 chr10 3537525 3537645 -142051643 - MIR SINE MIR -116 146 17 260 276 257 0 chr10 3539322 3539427 -142049861 - L2 LINE L2 -4 3268 3137 2299 99 7 0 chr10 3541389 3541691 -142047597 + AluSq SINE Alu 1 304 -9 183 80 0 0 chr10 3542480 3542505 -142046783 + (GA)n Simple_repeat Simple_repeat 1 25 0 605 101 39 51 chr10 3542507 3542685 -142046603 + (TAGA)n Simple_repeat Simple_repeat 3 178 0 501 117 62 41 chr10 3542719 3543064 -142046224 + (TAGA)n Simple_repeat Simple_repeat 1 352 0 665 90 34 34 chr10 3543123 3543300 -142045988 + (TAGA)n Simple_repeat Simple_repeat 3 179 0 389 230 11 0 chr10 3544429 3544516 -142044772 + MER33 DNA MER1_type 1 88 -236 671 133 97 67 chr10 3544656 3544851 -142044437 + MER33 DNA MER1_type 90 290 -34 234 347 60 7 chr10 3546682 3546832 -142042456 - MARNA DNA Mariner -27 559 402 21 0 0 0 chr10 3548297 3548318 -142040970 + AT_rich Low_complexity Low_complexity 1 21 0 360 355 17 29 chr10 3548725 3548897 -142040391 - MIR3 SINE MIR -6 202 33 2225 111 13 3 chr10 3549477 3549784 -142039504 - AluSx SINE Alu 0 312 3 812 163 8 0 chr10 3551193 3551322 -142037966 + FLAM_C SINE Alu 1 130 -13 474 316 21 21 chr10 3552671 3552864 -142036424 + MIR SINE MIR 70 262 0 22 0 0 0 chr10 3552911 3552933 -142036355 + AT_rich Low_complexity Low_complexity 1 22 0 2321 100 0 0 chr10 3553715 3554014 -142035274 + AluSq SINE Alu 1 299 -14 648 102 0 0 chr10 3554234 3554322 -142034966 - MLT1D LTR MaLR -45 460 373 1319 227 96 67 chr10 3554454 3554935 -142034353 + MLT1D LTR MaLR 3 497 -8 440 296 62 40 chr10 3555157 3555461 -142033827 - L1ME4a LINE L1 -262 5859 5549 21 0 0 0 chr10 3555884 3555905 -142033383 + AT_rich Low_complexity Low_complexity 1 21 0 239 361 83 0 chr10 3555919 3556052 -142033236 + MIR SINE MIR 119 262 0 284 257 0 9 chr10 3557396 3557505 -142031783 + (TG)n Simple_repeat Simple_repeat 1 108 0 450 376 0 0 chr10 3557517 3557695 -142031593 + (TG)n Simple_repeat Simple_repeat 1 178 0 21 71 0 0 chr10 3558883 3558925 -142030363 + AT_rich Low_complexity Low_complexity 1 42 0 181 170 0 85 chr10 3559071 3559118 -142030170 + L2 LINE L2 3230 3272 0 511 318 88 10 chr10 3560199 3560391 -142028897 + MIR SINE MIR 11 217 -45 21 36 0 0 chr10 3560462 3560490 -142028798 + AT_rich Low_complexity Low_complexity 1 28 0 357 293 68 63 chr10 3560863 3561307 -142027981 + L1ME4a LINE L1 5569 6014 -107 2334 78 7 0 chr10 3561603 3562069 -142027219 - AluSx SINE Alu 0 468 1 1845 86 37 19 chr10 3562878 3563146 -142026142 + AluY SINE Alu 39 311 0 207 0 0 0 chr10 3563748 3563771 -142025517 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 566 148 0 0 chr10 3563773 3563854 -142025434 - AluSp/q SINE Alu -21 292 212 367 292 76 70 chr10 3564551 3564866 -142024422 - MER102b DNA MER1_type 0 341 25 1129 210 85 48 chr10 3564944 3565296 -142023992 - MLT1A1 LTR MaLR 0 365 1 338 308 135 39 chr10 3566243 3566502 -142022786 - L2 LINE L2 -1415 1899 1666 3271 75 5 5 chr10 3566502 3566915 -142022373 - L1PA10 LINE L1 0 6168 5756 338 308 135 39 chr10 3566915 3567113 -142022175 - L2 LINE L2 -1648 1666 1398 2359 72 0 3 chr10 3567870 3568162 -142021126 + AluY SINE Alu 21 311 0 224 339 0 0 chr10 3568209 3568271 -142021017 + MIR SINE MIR 58 119 -143 590 222 157 0 chr10 3568720 3568905 -142020383 + L1ME2 LINE L1 4698 4911 -1235 1734 260 95 9 chr10 3568976 3569806 -142019482 + L1ME2 LINE L1 5010 6156 -14 1081 197 0 0 chr10 3570590 3570793 -142018495 + L1PA16 LINE L1 1 203 -6646 * 12353 197 18 19 chr10 3570790 3574886 -142014402 + L1PA16 LINE L1 998 5098 -1771 195 42 0 0 chr10 3574886 3574910 -142014378 + (CA)n Simple_repeat Simple_repeat 1 24 0 12353 197 18 19 chr10 3574910 3576378 -142012910 + L1PA16 LINE L1 5098 6565 -304 313 64 0 0 chr10 3576387 3576434 -142012854 - Alu SINE Alu 0 308 262 1498 164 13 41 chr10 3576434 3576752 -142012536 + L1PA16 LINE L1 6559 6867 -2 30 27 0 0 chr10 3576808 3576845 -142012443 + AT_rich Low_complexity Low_complexity 1 37 0 186 167 0 0 chr10 3576875 3576911 -142012377 + (TA)n Simple_repeat Simple_repeat 2 37 0 583 114 0 11 chr10 3577934 3578022 -142011266 - AluS SINE Alu -224 88 2 783 157 15 66 chr10 3578290 3578488 -142010800 - MER65A LTR ERV1 -2 443 256 27 49 0 0 chr10 3579478 3579519 -142009769 + AT_rich Low_complexity Low_complexity 1 41 0 288 130 0 0 chr10 3580199 3580245 -142009043 + (T)n Simple_repeat Simple_repeat 1 46 0 277 239 138 62 chr10 3581388 3581648 -142007640 + L1ME4a LINE L1 5492 5771 -350 249 260 30 0 chr10 3581912 3582012 -142007276 + L1ME4a LINE L1 6003 6105 -16 29 47 0 0 chr10 3582083 3582126 -142007162 + AT_rich Low_complexity Low_complexity 1 43 0 923 105 0 30 chr10 3582140 3582273 -142007015 - FLAM_C SINE Alu -6 137 9 193 56 28 28 chr10 3583490 3583526 -142005762 + (TTTTTG)n Simple_repeat Simple_repeat 3 38 0 225 291 108 7 chr10 3583554 3583702 -142005586 - MER103 DNA DNA -2 164 2 4134 72 18 0 chr10 3584631 3585186 -142004102 + L1PB1 LINE L1 5583 6147 -4 284 234 85 21 chr10 3585709 3585803 -142003485 - L2 LINE L2 -11 3261 3162 1829 173 21 0 chr10 3585820 3586156 -142003132 + MER7A DNA MER2_type 6 346 0 22 0 0 0 chr10 3587259 3587281 -142002007 + AT_rich Low_complexity Low_complexity 1 22 0 430 223 47 7 chr10 3589921 3590069 -141999219 + MER53 DNA DNA 8 161 -28 1087 206 54 97 chr10 3590341 3590723 -141998565 + MLT1C LTR MaLR 22 390 0 1272 299 103 23 chr10 3590991 3591693 -141997595 + L1ME3A LINE L1 5383 6140 -30 1442 127 0 49 chr10 3591734 3591922 -141997366 - L1PB1 LINE L1 -1 6150 5975 1980 124 64 3 chr10 3591922 3592205 -141997083 - AluSc SINE Alu -9 300 1 1442 127 0 49 chr10 3592205 3592261 -141997027 - L1PB1 LINE L1 -176 5975 5918 401 233 10 19 chr10 3592287 3592390 -141996898 - MLT2D LTR ERVL -230 184 83 852 317 70 19 chr10 3592672 3593619 -141995669 - L1MC4a LINE L1 -831 5315 4948 221 360 107 0 chr10 3594974 3595124 -141994164 - L2 LINE L2 -2050 1264 1099 207 88 0 0 chr10 3595245 3595279 -141994009 + (TC)n Simple_repeat Simple_repeat 2 35 0 302 326 17 76 chr10 3596162 3596334 -141992954 - MER5B DNA MER1_type -15 163 2 29 0 0 0 chr10 3596979 3597008 -141992280 + AT_rich Low_complexity Low_complexity 1 29 0 528 167 10 0 chr10 3597342 3597444 -141991844 - FLAM_A SINE Alu -4 138 36 556 285 52 10 chr10 3597444 3597749 -141991539 + MLT1J LTR MaLR 40 357 -154 1021 103 27 0 chr10 3597766 3597912 -141991376 + BC200 scRNA scRNA 1 150 -50 241 186 57 129 chr10 3597913 3598013 -141991275 + MLT1J LTR MaLR 394 485 -26 3822 76 39 9 chr10 3598013 3598574 -141990714 - L1PA10 LINE L1 0 6168 5606 241 186 57 129 chr10 3598574 3598597 -141990691 + MLT1J LTR MaLR 485 508 -3 2266 69 26 23 chr10 3599660 3599966 -141989322 - AluSq SINE Alu -6 307 1 231 262 12 0 chr10 3600627 3600711 -141988577 - MER53 DNA DNA 0 189 105 461 108 0 48 chr10 3602688 3602771 -141986517 - L1PA10 LINE L1 0 6168 6090 798 19 37 0 chr10 3602771 3602879 -141986409 + L1P LINE L1 5316 5427 -734 450 286 136 15 chr10 3603010 3603216 -141986072 - MIR SINE MIR -18 244 14 199 329 101 25 chr10 3604003 3604161 -141985127 - MIR SINE MIR -9 253 84 2453 68 0 0 chr10 3605499 3605795 -141983493 - AluY SINE Alu -15 296 1 23 54 0 0 chr10 3605958 3605995 -141983293 + AT_rich Low_complexity Low_complexity 1 37 0 460 266 154 0 chr10 3606320 3606508 -141982780 - MLT1L LTR MaLR -8 607 391 219 307 13 13 chr10 3606778 3606853 -141982435 - L2 LINE L2 0 3272 3198 929 178 6 12 chr10 3607777 3607940 -141981348 - FRAM SINE Alu -14 162 1 516 193 106 19 chr10 3607951 3608112 -141981176 + Charlie1b DNA MER1_type 109 283 -240 819 198 11 21 chr10 3610685 3610872 -141978416 - AluJo SINE Alu -13 299 115 2196 229 59 39 chr10 3611352 3611945 -141977343 - MER77 LTR ERV1 0 605 1 362 304 26 41 chr10 3612152 3612346 -141976942 + MLT1K LTR MaLR 154 344 -244 447 86 14 20 chr10 3612463 3612548 -141976740 - MLT1E1 LTR MaLR -512 81 1 257 254 33 90 chr10 3612551 3612673 -141976615 - MIR SINE MIR -67 195 81 1080 224 59 57 chr10 3612984 3613373 -141975915 + MLT1C LTR MaLR 34 423 -44 712 184 6 34 chr10 3613519 3613681 -141975607 - L1ME LINE L1 -547 5574 5421 * 3374 202 89 10 chr10 3613679 3614916 -141974372 - L1MB8 LINE L1 -4 6174 4834 2082 143 0 7 chr10 3615132 3615309 -141973979 - AluSx SINE Alu -6 306 130 189 74 0 0 chr10 3615309 3615336 -141973952 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2082 143 0 7 chr10 3615336 3615466 -141973822 - AluSx SINE Alu -182 130 1 1007 196 86 8 chr10 3615860 3616105 -141973183 + MLT1C LTR MaLR 1 264 -203 309 254 83 55 chr10 3618272 3618453 -141970835 - MIR SINE MIR -6 256 71 239 160 40 20 chr10 3618601 3618651 -141970637 + MIR SINE MIR 90 140 -122 198 0 0 0 chr10 3618759 3618781 -141970507 + (CAAAA)n Simple_repeat Simple_repeat 1 22 0 2139 118 3 0 chr10 3619163 3619450 -141969838 + AluSx SINE Alu 6 293 -19 1337 224 80 23 chr10 3619662 3620099 -141969189 - MLT1C LTR MaLR 0 467 6 250 300 50 25 chr10 3620214 3620334 -141968954 - MLT1J2 LTR MaLR -45 405 283 1269 213 68 21 chr10 3620465 3620845 -141968443 + L1M4 LINE L1 4901 5298 -848 369 266 199 50 chr10 3620870 3621482 -141967806 + L2 LINE L2 2625 3311 -2 1762 87 101 56 chr10 3621895 3622181 -141967107 - AluSg SINE Alu -9 301 3 2071 144 3 3 chr10 3622713 3623025 -141966263 + AluSx SINE Alu 1 312 0 1140 290 91 22 chr10 3623063 3623614 -141965674 + MLT1E LTR MaLR 5 593 0 350 335 153 0 chr10 3623892 3624062 -141965226 + LTR41 LTR ERVL 342 537 -236 278 253 126 0 chr10 3624170 3624265 -141965023 + L2 LINE L2 2461 2567 -747 308 299 76 28 chr10 3624557 3624670 -141964618 + MIR3 SINE MIR 25 148 -60 2144 115 0 20 chr10 3624670 3624975 -141964313 + AluSx SINE Alu 1 299 -13 308 299 76 28 chr10 3624975 3625005 -141964283 + MIR3 SINE MIR 148 175 -33 236 339 57 16 chr10 3625264 3625388 -141963900 + MIR SINE MIR 24 152 -110 339 153 0 0 chr10 3625730 3625789 -141963499 + AluS SINE Alu 2 60 -248 1731 161 16 20 chr10 3626659 3626963 -141962325 + AluJo SINE Alu 1 303 -9 437 254 8 8 chr10 3627162 3627280 -141962008 + L2 LINE L2 3193 3310 -3 363 23 0 0 chr10 3678500 3678544 -141910744 + (TG)n Simple_repeat Simple_repeat 1 44 0 1550 99 5 0 chr10 3679218 3679431 -141909857 - AluSq SINE Alu -18 295 82 282 324 50 22 chr10 3679431 3679562 -141909726 - MIR SINE MIR -76 186 49 207 200 24 47 chr10 3680017 3680102 -141909186 + (CCCG)n Simple_repeat Simple_repeat 2 84 0 248 310 80 0 chr10 3680586 3680699 -141908589 - MIR SINE MIR -55 207 86 23 0 0 0 chr10 3680997 3681020 -141908268 + AT_rich Low_complexity Low_complexity 1 23 0 705 133 0 17 chr10 3681086 3681206 -141908082 - L1PA13 LINE L1 -1 6162 6045 206 261 138 0 chr10 3681708 3681773 -141907515 + MIR SINE MIR 189 262 0 425 155 0 39 chr10 3681820 3681923 -141907365 - L1PA2 LINE L1 0 6155 6057 56 86 0 0 chr10 3681972 3682112 -141907176 + GC_rich Low_complexity Low_complexity 1 140 0 504 189 0 0 chr10 3682271 3682414 -141906874 + (CA)n Simple_repeat Simple_repeat 1 143 0 314 80 20 0 chr10 3682528 3682578 -141906710 + MADE1 DNA Mariner 30 80 0 183 80 0 0 chr10 3683965 3683990 -141905298 + (A)n Simple_repeat Simple_repeat 1 25 0 231 280 23 76 chr10 3684185 3684317 -141904971 + L2 LINE L2 3189 3313 0 * 426 333 77 16 chr10 3684311 3684494 -141904794 - MIR SINE MIR -18 244 51 324 264 66 16 chr10 3685563 3685684 -141903604 - MIR SINE MIR -29 233 107 201 39 0 0 chr10 3687048 3687074 -141902214 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 1648 123 19 112 chr10 3687119 3687493 -141901795 + MER44D DNA MER2_type 1 609 0 517 192 24 6 chr10 3687753 3688097 -141901191 + (TG)n Simple_repeat Simple_repeat 1 350 0 181 371 171 12 chr10 3688556 3688726 -141900562 - MIR SINE MIR -20 242 46 941 151 0 17 chr10 3689841 3690013 -141899275 - L1MA5A LINE L1 -7 6290 6122 391 323 65 26 chr10 3692252 3692484 -141896804 - L2 LINE L2 0 3313 3073 291 295 213 22 chr10 3692519 3692885 -141896403 - L2 LINE L2 -342 2972 2537 209 373 18 9 chr10 3693269 3693379 -141895909 - MIR SINE MIR -127 135 25 275 265 0 10 chr10 3693489 3693587 -141895701 + (TATG)n Simple_repeat Simple_repeat 2 98 0 26 0 0 0 chr10 3693617 3693643 -141895645 + AT_rich Low_complexity Low_complexity 1 26 0 1645 175 0 4 chr10 3693998 3694278 -141895010 + AluJb SINE Alu 1 279 -33 230 200 40 0 chr10 3694288 3694338 -141894950 - MLT1A1 LTR MaLR -313 52 1 1970 25 0 4 chr10 3696490 3696731 -141892557 - L1P LINE L1 -779 5367 5128 1222 14 0 0 chr10 3696731 3696876 -141892412 + L1P LINE L1 4981 5125 -1021 22 0 0 0 chr10 3697109 3697131 -141892157 + AT_rich Low_complexity Low_complexity 1 22 0 402 277 42 0 chr10 3697677 3697796 -141891492 + L1MC4 LINE L1 6580 6703 -1339 351 213 32 75 chr10 3697788 3697882 -141891406 + L1MC4 LINE L1 6614 6703 -1339 * 464 313 13 13 chr10 3698510 3698660 -141890628 + MIR SINE MIR 2 151 -111 399 154 0 154 chr10 3698667 3698771 -141890517 - MER1B DNA MER1_type 0 339 252 246 149 15 119 chr10 3698823 3698890 -141890398 - MER1B DNA MER1_type -63 276 217 561 314 49 14 chr10 3699027 3699250 -141890038 + HERVL LTR ERVL 3321 3551 -2213 1042 307 172 29 chr10 3699337 3700252 -141889036 + HERVL LTR ERVL 3621 4671 -852 344 291 208 21 chr10 3700886 3701127 -141888161 + LTR33 LTR ERVL 3 288 -233 1563 133 8 0 chr10 3702938 3703179 -141886109 - AluSx SINE Alu -15 297 55 798 207 101 30 chr10 3704032 3704465 -141884823 - MLT1D LTR MaLR 0 505 1 241 290 168 23 chr10 3704637 3704768 -141884520 - MIR SINE MIR -40 222 73 289 304 18 36 chr10 3704813 3704925 -141884363 - MIR SINE MIR -88 174 65 234 273 0 0 chr10 3705627 3705682 -141883606 - HAL1 LINE L1 -811 1696 1642 242 339 0 0 chr10 3706343 3706408 -141882880 + L2 LINE L2 3249 3313 0 427 296 71 12 chr10 3706851 3707091 -141882197 - HAL1 LINE L1 -744 1763 1510 651 278 116 4 chr10 3708459 3708700 -141880588 - L2 LINE L2 -24 3289 3022 5075 172 22 27 chr10 3708713 3709724 -141879564 - L1MA5A LINE L1 -1209 4937 3932 4670 151 46 15 chr10 3709717 3710858 -141878430 + L1MA5A LINE L1 4939 6102 -195 * 850 64 0 0 chr10 3711594 3711703 -141877585 - L1P LINE L1 -5129 1017 909 3670 47 0 24 chr10 3711703 3712203 -141877085 + L1PA4 LINE L1 5686 6174 0 230 0 33 0 chr10 3716233 3716263 -141873025 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 1803 114 78 0 chr10 3716304 3716575 -141872713 + AluSg SINE Alu 1 292 -18 455 228 44 0 chr10 3718185 3718299 -141870989 + MIR SINE MIR 26 144 -118 233 192 60 50 chr10 3718424 3718595 -141870693 - MLT1B LTR MaLR -68 522 336 * 1549 232 16 16 chr10 3718593 3718960 -141870328 + MLT1B LTR MaLR 8 374 -16 339 182 15 0 chr10 3719389 3719455 -141869833 - L1MA7 LINE L1 -428 5863 5797 354 284 52 74 chr10 3719881 3720110 -141869178 - L2 LINE L2 -2 3311 3088 1964 140 3 3 chr10 3720151 3720459 -141868829 - AluSx SINE Alu -4 308 1 402 291 35 70 chr10 3721102 3721189 -141868099 + L3 LINE CR1 1144 1224 -353 1934 140 0 3 chr10 3721189 3721481 -141867807 + AluSc SINE Alu 1 291 -18 402 291 35 70 chr10 3721481 3721565 -141867723 + L3 LINE CR1 1224 1309 -268 215 329 25 95 chr10 3722404 3722562 -141866726 - MIR SINE MIR -6 202 56 1163 225 49 70 chr10 3722707 3723093 -141866195 - MLT1B LTR MaLR -10 380 3 318 258 68 53 chr10 3723233 3723365 -141865923 - MIR SINE MIR -107 155 22 200 150 0 50 chr10 3725381 3725421 -141863867 + L2 LINE L2 3223 3260 -12 217 316 32 21 chr10 3727983 3728078 -141861210 - MER5A DNA MER1_type 0 189 94 215 229 21 0 chr10 3728182 3728230 -141861058 + CT-rich Low_complexity Low_complexity 4 52 0 311 277 21 7 chr10 3728363 3728484 -141860804 - MIR SINE MIR -74 134 15 226 189 0 0 chr10 3729269 3729306 -141859982 - LTR33 LTR ERVL 0 521 485 261 270 34 34 chr10 3729505 3729594 -141859694 - MERVL LTR ERVL -2286 3199 3111 1947 304 58 16 chr10 3729950 3730740 -141858548 - MERVL LTR ERVL -3048 2716 1894 223 329 12 75 chr10 3730803 3730964 -141858324 - L2 LINE L2 -888 2426 2276 1138 133 0 0 chr10 3731074 3731232 -141858056 + AluSc SINE Alu 135 292 -17 586 330 14 0 chr10 3731294 3731503 -141857785 - L2 LINE L2 -1259 2055 1844 285 51 0 0 chr10 3732601 3732640 -141856648 + (TG)n Simple_repeat Simple_repeat 2 40 0 332 128 0 0 chr10 3732915 3732962 -141856326 + AluJ/FLAM SINE Alu 14 60 -242 674 179 0 16 chr10 3732962 3733085 -141856203 - AluJo SINE Alu -122 190 70 252 0 0 0 chr10 3733107 3733135 -141856153 + (A)n Simple_repeat Simple_repeat 1 28 0 189 0 0 0 chr10 3733135 3733156 -141856132 + (GA)n Simple_repeat Simple_repeat 2 22 0 987 201 22 35 chr10 3733604 3733833 -141855455 + AluJo SINE Alu 71 296 -16 189 0 0 0 chr10 3735216 3735237 -141854051 + (TC)n Simple_repeat Simple_repeat 2 22 0 1725 176 7 21 chr10 3735252 3735542 -141853746 - AluJo SINE Alu -25 287 2 192 40 0 0 chr10 3735853 3735878 -141853410 + (A)n Simple_repeat Simple_repeat 1 25 0 281 262 36 12 chr10 3737501 3737585 -141851703 + MER103 DNA DNA 57 142 -24 2998 101 10 2 chr10 3737693 3738109 -141851179 + L1PB1 LINE L1 5720 6138 -13 194 0 39 0 chr10 3738112 3738138 -141851150 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 292 176 14 14 chr10 3738153 3738227 -141851061 + (CATATA)n Simple_repeat Simple_repeat 2 75 0 2720 30 0 0 chr10 3739621 3739922 -141849366 - AluY SINE Alu -10 301 1 225 154 0 0 chr10 3740990 3741029 -141848259 + CT-rich Low_complexity Low_complexity 2 40 0 21 0 0 0 chr10 3741676 3741697 -141847591 + GC_rich Low_complexity Low_complexity 1 21 0 516 252 35 0 chr10 3741697 3741840 -141847448 + MER5A DNA MER1_type 42 189 0 181 219 0 0 chr10 3741921 3741962 -141847326 + MER5B DNA MER1_type 5 45 -133 270 0 0 0 chr10 3742144 3742174 -141847114 + (TG)n Simple_repeat Simple_repeat 1 30 0 627 291 110 68 chr10 3742678 3743225 -141846063 + MLT1K LTR MaLR 14 583 -5 2159 112 7 3 chr10 3743603 3743897 -141845391 + AluSx SINE Alu 1 295 -17 2375 76 0 0 chr10 3744624 3744914 -141844374 - AluSc SINE Alu -19 290 1 218 256 11 67 chr10 3745654 3745703 -141843585 + L2 LINE L2 3184 3227 -45 3988 137 9 16 chr10 3745703 3745822 -141843466 - MER41B LTR ERV1 -2 633 515 2163 115 26 10 chr10 3745822 3746127 -141843161 + AluSq SINE Alu 1 310 -3 3988 137 9 16 chr10 3746127 3746644 -141842644 - MER41B LTR ERV1 -120 515 1 218 256 11 67 chr10 3746644 3746684 -141842604 + L2 LINE L2 3227 3268 -4 940 244 110 60 chr10 3746762 3747298 -141841990 + HAL1 LINE L1 1427 1989 -518 221 313 52 26 chr10 3747299 3747414 -141841874 + L2 LINE L2 3151 3268 -4 589 282 74 29 chr10 3747570 3747921 -141841367 + HAL1 LINE L1 2120 2486 -21 2246 207 76 8 chr10 3748013 3748524 -141840764 + MER44D DNA MER2_type 1 601 -4 273 285 179 20 chr10 3749750 3749901 -141839387 + MIR3 SINE MIR 8 182 -26 249 162 73 0 chr10 3751931 3751999 -141837289 + MIR SINE MIR 73 145 -117 725 296 73 54 chr10 3752325 3752951 -141836337 + L1MEc LINE L1 1593 2230 -4166 901 266 94 16 chr10 3752992 3753428 -141835860 + L1MEc LINE L1 2272 2741 -3474 306 243 110 143 chr10 3753444 3753745 -141835543 + L1MEc LINE L1 3051 3341 -2874 2472 195 133 16 chr10 3755313 3755943 -141833345 + MER39 LTR ERV1 4 707 0 23 33 0 0 chr10 3758358 3758388 -141830900 + AT_rich Low_complexity Low_complexity 1 30 0 2604 58 0 0 chr10 3758464 3758775 -141830513 - AluY SINE Alu 0 311 1 202 295 13 13 chr10 3760117 3760195 -141829093 - MIR SINE MIR -17 245 168 212 317 46 63 chr10 3760295 3760579 -141828709 + L2 LINE L2 2212 2490 -824 195 42 0 0 chr10 3760579 3760603 -141828685 + (TCCC)n Simple_repeat Simple_repeat 3 26 0 200 349 0 0 chr10 3762270 3762333 -141826955 + (CACG)n Simple_repeat Simple_repeat 2 64 0 2261 111 0 16 chr10 3762751 3763066 -141826222 + AluSx SINE Alu 1 310 -2 2255 65 0 7 chr10 3764190 3764465 -141824823 - AluY SINE Alu 0 311 39 683 317 74 54 chr10 3765135 3765306 -141823982 - L1ME LINE L1 -5066 1004 838 2254 115 0 0 chr10 3765306 3765602 -141823686 - AluSx SINE Alu -16 296 1 683 317 74 54 chr10 3765602 3766394 -141822894 - L1ME LINE L1 -5232 838 22 255 236 67 118 chr10 3766586 3766883 -141822405 - L1M4 LINE L1 -907 5239 4958 392 304 35 47 chr10 3767270 3767441 -141821847 + MIR SINE MIR 24 192 -70 2253 110 3 3 chr10 3767445 3767755 -141821533 + AluSx SINE Alu 3 312 0 499 276 7 73 chr10 3768263 3768538 -141820750 - L2 LINE L2 0 3313 3057 1916 142 48 0 chr10 3769914 3770209 -141819079 + AluSx SINE Alu 1 309 -3 2336 106 48 31 chr10 3770532 3770890 -141818398 + THE1B LTR MaLR 1 364 0 26 0 0 0 chr10 3771594 3771620 -141817668 + AT_rich Low_complexity Low_complexity 1 26 0 2198 117 0 0 chr10 3771889 3772179 -141817109 - AluSx SINE Alu -1 311 22 592 133 0 0 chr10 3772179 3772262 -141817026 - AluS SINE Alu -228 84 2 298 311 45 8 chr10 3772628 3772760 -141816528 - MIR SINE MIR -3 259 123 272 296 178 0 chr10 3773060 3773229 -141816059 + MLT1G1 LTR MaLR 358 556 -39 405 0 0 0 chr10 3774610 3774655 -141814633 + (CA)n Simple_repeat Simple_repeat 1 45 0 995 188 117 78 chr10 3774869 3775178 -141814110 - MLT1A1 LTR MaLR -32 333 13 378 352 58 19 chr10 3775515 3775588 -141813700 + L1ME LINE L1 5312 5381 -740 249 33 0 0 chr10 3775588 3775618 -141813670 + (TA)n Simple_repeat Simple_repeat 2 31 0 378 352 58 19 chr10 3775618 3775922 -141813366 + L1ME LINE L1 5381 5704 -417 1222 146 34 0 chr10 3776011 3776217 -141813071 + Tigger2 DNA MER2_type 1 213 -2505 886 172 0 49 chr10 3776214 3776312 -141812976 + Tigger2 DNA MER2_type 2554 2642 -66 * 1991 116 103 3 chr10 3776312 3776632 -141812656 - THE1A LTR MaLR 0 355 4 886 172 0 49 chr10 3776632 3776696 -141812592 + Tigger2 DNA MER2_type 2642 2708 0 24 0 0 0 chr10 3776763 3776787 -141812501 + AT_rich Low_complexity Low_complexity 1 24 0 391 250 96 13 chr10 3777144 3777300 -141811988 + L1ME LINE L1 5500 5668 -453 612 150 2 74 chr10 3777578 3777749 -141811539 - Charlie3 DNA MER1_type -65 2645 159 264 282 24 0 chr10 3778376 3778460 -141810828 - MIR SINE MIR -62 146 59 21 82 0 0 chr10 3779948 3779997 -141809291 + AT_rich Low_complexity Low_complexity 1 49 0 201 121 0 0 chr10 3780165 3780198 -141809090 + (T)n Simple_repeat Simple_repeat 1 33 0 228 176 27 14 chr10 3780980 3781054 -141808234 + (TA)n Simple_repeat Simple_repeat 2 76 0 246 164 0 0 chr10 3782257 3782312 -141806976 + T-rich Low_complexity Low_complexity 1 55 0 224 322 158 33 chr10 3784109 3784261 -141805027 + MIR3 SINE MIR 30 200 -8 241 174 14 29 chr10 3787792 3787861 -141801427 + A-rich Low_complexity Low_complexity 1 68 0 24 0 0 0 chr10 3788110 3788134 -141801154 + GC_rich Low_complexity Low_complexity 1 24 0 214 160 0 107 chr10 3789046 3789121 -141800167 + C-rich Low_complexity Low_complexity 5 71 0 244 280 42 59 chr10 3790859 3790977 -141798311 - MIR3 SINE MIR -38 170 55 21 0 0 0 chr10 3791372 3791393 -141797895 + AT_rich Low_complexity Low_complexity 1 21 0 1894 128 7 0 chr10 3791731 3792020 -141797268 - AluSx SINE Alu -21 291 1 574 284 100 8 chr10 3792418 3792679 -141796609 + L1ME2 LINE L1 4546 4830 -1316 1369 268 52 32 chr10 3792734 3793405 -141795883 - L1MCc LINE L1 -4888 1535 1217 945 262 0 9 chr10 3793405 3793630 -141795658 - MER58A DNA MER1_type -1 223 1 1369 268 52 32 chr10 3793630 3793839 -141795449 - L1MCc LINE L1 -5206 1217 1014 387 239 44 97 chr10 3793905 3794131 -141795157 - L1MCc LINE L1 -5541 882 669 533 254 178 9 chr10 3794159 3794372 -141794916 - L1MCc LINE L1 -5970 453 205 465 211 28 49 chr10 3794384 3794526 -141794762 - L1MCc LINE L1 -6259 164 26 299 183 33 0 chr10 3794526 3794586 -141794702 + L1ME2 LINE L1 4868 4929 -1217 241 213 0 53 chr10 3794620 3794695 -141794593 + A-rich Low_complexity Low_complexity 1 71 0 341 159 0 14 chr10 3794695 3794764 -141794524 + GA-rich Low_complexity Low_complexity 1 68 0 2216 261 91 27 chr10 3794771 3795887 -141793401 + L1ME2 LINE L1 4960 6152 -12 209 220 17 0 chr10 3796050 3796109 -141793179 + (TGGA)n Simple_repeat Simple_repeat 2 61 0 346 253 13 114 chr10 3796246 3796404 -141792884 + MIR SINE MIR 21 162 -100 201 240 91 66 chr10 3796420 3796541 -141792747 - MIR SINE MIR -36 226 103 2074 112 0 0 chr10 3797309 3797624 -141791664 + AluSx SINE Alu 1 315 0 183 156 0 0 chr10 3798985 3799017 -141790271 + (CACG)n Simple_repeat Simple_repeat 1 32 0 188 67 33 0 chr10 3799505 3799535 -141789753 + (TA)n Simple_repeat Simple_repeat 2 32 0 1730 130 72 4 chr10 3800493 3800769 -141788519 - AluSx SINE Alu -17 295 1 651 240 41 77 chr10 3801256 3801477 -141787811 + MER20 DNA MER1_type 1 213 -6 1581 205 73 6 chr10 3801501 3801843 -141787445 + MLT1A1 LTR MaLR 1 365 0 1616 135 15 0 chr10 3801923 3802182 -141787106 + AluSx SINE Alu 47 309 -3 24 32 0 0 chr10 3802188 3802219 -141787069 + AT_rich Low_complexity Low_complexity 1 31 0 356 327 145 0 chr10 3802428 3802587 -141786701 + MIR SINE MIR 81 262 0 190 269 58 0 chr10 3803114 3803166 -141786122 + L3 LINE CR1 1392 1446 -131 527 189 8 0 chr10 3804475 3804602 -141784686 + CT-rich Low_complexity Low_complexity 2 129 0 1979 121 0 0 chr10 3806855 3807158 -141782130 + AluSx SINE Alu 1 303 0 545 278 168 0 chr10 3807233 3807424 -141781864 - MIR SINE MIR 0 262 40 439 229 18 28 chr10 3807444 3807728 -141781560 + GA-rich Low_complexity Low_complexity 1 280 0 439 149 11 11 chr10 3808827 3808921 -141780367 + CT-rich Low_complexity Low_complexity 3 96 0 180 0 0 0 chr10 3809833 3809853 -141779435 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 238 263 75 25 chr10 3812114 3812194 -141777094 + MIR3 SINE MIR 10 93 -115 290 286 12 0 chr10 3813596 3813680 -141775608 + (CA)n Simple_repeat Simple_repeat 1 85 0 231 36 0 0 chr10 3814196 3814224 -141775064 + (CA)n Simple_repeat Simple_repeat 2 29 0 25 0 0 0 chr10 3814394 3814419 -141774869 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr10 3814456 3814479 -141774809 + AT_rich Low_complexity Low_complexity 1 23 0 359 21 21 0 chr10 3815784 3815832 -141773456 + (GA)n Simple_repeat Simple_repeat 2 50 0 264 191 0 0 chr10 3816453 3816500 -141772788 - MER39 LTR ERV1 -268 439 393 230 143 29 100 chr10 3816548 3816618 -141772670 - MER34 LTR ERV1 -411 131 67 231 273 52 44 chr10 3817131 3817228 -141772060 - BSR/Beta Satellite Satellite 0 282 187 248 214 205 9 chr10 3817228 3817340 -141771948 - MER101 LTR ERV1 -223 251 118 231 273 52 44 chr10 3817340 3817411 -141771877 - BSR/Beta Satellite Satellite -95 187 1 241 121 121 0 chr10 3817550 3817616 -141771672 + (TATAA)n Simple_repeat Simple_repeat 4 77 0 469 96 48 0 chr10 3818188 3818271 -141771017 + T-rich Low_complexity Low_complexity 3 89 0 2005 137 16 0 chr10 3818276 3818582 -141770706 - AluSq SINE Alu 0 313 3 2061 113 3 0 chr10 3818584 3818876 -141770412 - AluSx SINE Alu -13 299 7 1943 126 0 19 chr10 3818909 3819227 -141770061 - AluSx SINE Alu 0 312 1 237 159 0 0 chr10 3819915 3819959 -141769329 + (CA)n Simple_repeat Simple_repeat 1 44 0 201 154 0 0 chr10 3819959 3819998 -141769290 + (TG)n Simple_repeat Simple_repeat 2 40 0 639 334 155 7 chr10 3820155 3821143 -141768145 - L2 LINE L2 -5 3308 2103 356 329 6 32 chr10 3822489 3822647 -141766641 + MER63A DNA MER1_type 36 189 -21 217 362 105 51 chr10 3823063 3823320 -141765968 - L3b LINE CR1 -9 1574 1304 194 261 29 14 chr10 3824057 3824126 -141765162 - MIR SINE MIR -10 252 183 475 135 73 21 chr10 3824343 3824439 -141764849 + MER4A LTR ERV1 1 101 -563 * 1884 123 6 25 chr10 3824438 3824788 -141764500 + MER4A LTR ERV1 263 664 0 1997 108 22 0 chr10 3824979 3825280 -141764008 + AluSq SINE Alu 1 307 0 470 311 89 38 chr10 3825292 3825684 -141763604 - L2 LINE L2 -422 2892 2481 553 263 45 58 chr10 3825772 3825996 -141763292 + MLT1E LTR MaLR 27 247 -346 3578 148 45 54 chr10 3825996 3826573 -141762715 + L1MA8 LINE L1 5560 6130 -161 2336 139 55 0 chr10 3826573 3826955 -141762333 - MER57A LTR ERV1 0 403 1 3578 148 45 54 chr10 3826955 3827115 -141762173 + L1MA8 LINE L1 6130 6290 -1 245 244 0 39 chr10 3827115 3827185 -141762103 + MLT1E LTR MaLR 521 589 -4 809 291 128 5 chr10 3827191 3827580 -141761708 - L2 LINE L2 -940 2374 1938 345 123 12 37 chr10 3827691 3827772 -141761516 + (TTCTC)n Simple_repeat Simple_repeat 3 81 0 * 635 94 10 0 chr10 3827758 3827854 -141761434 + (TTCC)n Simple_repeat Simple_repeat 3 99 0 1494 193 43 3 chr10 3827867 3828167 -141761121 - AluJb SINE Alu 0 312 1 2001 114 0 35 chr10 3828528 3828845 -141760443 - AluY SINE Alu -5 306 1 1555 206 96 54 chr10 3828870 3829056 -141760232 + MLT2B2 LTR ERVL 3 180 -335 4565 125 25 10 chr10 3829056 3829737 -141759551 - LTR8 LTR ERV1 0 691 1 1555 206 96 54 chr10 3829737 3829977 -141759311 + MLT2B2 LTR ERVL 180 447 -68 186 43 0 0 chr10 3829980 3830003 -141759285 + (CATATA)n Simple_repeat Simple_repeat 5 27 0 215 170 0 19 chr10 3830003 3830056 -141759232 + (TG)n Simple_repeat Simple_repeat 2 53 0 391 351 83 12 chr10 3830100 3830268 -141759020 - HAL1 LINE L1 -1100 1407 1228 291 157 0 0 chr10 3830377 3830428 -141758860 + (CA)n Simple_repeat Simple_repeat 2 52 0 300 284 0 53 chr10 3830428 3830523 -141758765 + L1MC4 LINE L1 6610 6699 -1343 288 308 93 0 chr10 3830524 3830631 -141758657 + L2 LINE L2 3156 3272 0 22 0 0 0 chr10 3830677 3830699 -141758589 + AT_rich Low_complexity Low_complexity 1 22 0 609 293 96 76 chr10 3830978 3831177 -141758111 - HAL1 LINE L1 -900 1607 1413 1930 80 30 36 chr10 3831177 3831349 -141757939 - AluY SINE Alu -9 302 131 221 0 0 33 chr10 3831349 3831379 -141757909 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1930 80 30 36 chr10 3831379 3831508 -141757780 - AluY SINE Alu -180 131 3 609 293 96 76 chr10 3831508 3831755 -141757533 - HAL1 LINE L1 -1094 1413 1152 735 228 7 0 chr10 3832132 3832281 -141757007 + FRAM SINE Alu 9 158 -18 1955 112 0 4 chr10 3832289 3832603 -141756685 + AluSx SINE Alu 9 321 0 25 31 0 0 chr10 3832646 3832678 -141756610 + AT_rich Low_complexity Low_complexity 1 32 0 1206 99 0 6 chr10 3833747 3833918 -141755370 - AluSg/x SINE Alu -18 294 125 195 316 128 17 chr10 3833987 3834104 -141755184 + MIR SINE MIR 17 146 -62 216 0 0 0 chr10 3835870 3835894 -141753394 + (A)n Simple_repeat Simple_repeat 1 24 0 1143 176 118 123 chr10 3885955 3886371 -141702917 - MLT2D LTR ERVL 0 414 1 23 0 0 0 chr10 3886408 3886431 -141702857 + AT_rich Low_complexity Low_complexity 1 23 0 2168 142 0 0 chr10 3886603 3886906 -141702382 + AluSx SINE Alu 1 303 -9 212 261 15 15 chr10 3887004 3887069 -141702219 - MIR SINE MIR -107 101 37 372 274 122 16 chr10 3887527 3887848 -141701440 - L1ME4a LINE L1 -3 6118 5764 759 191 89 93 chr10 3887911 3888233 -141701055 + MLT1A2 LTR MaLR 6 300 -74 618 264 22 0 chr10 3888387 3888565 -141700723 - MER45 DNA AcHobo -856 184 3 1141 132 11 0 chr10 3890912 3891086 -141698202 - AluSq SINE Alu -4 309 134 2104 143 0 0 chr10 3891086 3891387 -141697901 - AluSp SINE Alu -12 301 1 395 305 32 13 chr10 3891943 3892097 -141697191 + MIR SINE MIR 21 177 -85 199 309 178 13 chr10 3892618 3892770 -141696518 - MER5A DNA MER1_type 0 189 13 2082 135 7 0 chr10 3892920 3893223 -141696065 - AluSx SINE Alu -7 305 1 300 277 84 34 chr10 3894182 3894301 -141694987 + MIR SINE MIR 137 261 -1 2288 115 0 3 chr10 3894636 3895004 -141694284 + AluSx SINE Alu 3 369 0 639 254 0 7 chr10 3895084 3895226 -141694062 - MER8 DNA MER2_type 0 239 99 332 325 37 47 chr10 3895777 3895968 -141693320 + MIR SINE MIR 29 217 -45 1272 256 49 23 chr10 3896317 3896664 -141692624 - MLT1A2 LTR MaLR -18 356 1 2708 169 62 108 chr10 3897046 3897257 -141692031 - LTR8A LTR ERV1 0 727 508 1991 149 10 3 chr10 3897257 3897565 -141691723 - AluSx SINE Alu -2 310 1 2708 169 62 108 chr10 3897565 3898114 -141691174 - LTR8A LTR ERV1 -219 508 2 482 333 34 19 chr10 3898319 3898583 -141690705 - LTR16A LTR ERVL -79 371 104 2580 113 8 3 chr10 3898633 3898995 -141690293 - THE1B LTR MaLR 0 364 1 725 230 288 25 chr10 3899267 3899781 -141689507 - LTR50 LTR ERVL -10 785 137 2128 136 7 3 chr10 3900001 3900311 -141688977 - AluSq SINE Alu -2 311 1 2089 120 23 3 chr10 3901271 3901570 -141687718 + AluSx SINE Alu 1 305 -7 504 0 0 0 chr10 3902595 3902651 -141686637 + (TTA)n Simple_repeat Simple_repeat 2 57 0 1796 148 24 10 chr10 3903956 3904253 -141685035 + AluSx SINE Alu 1 301 -11 1717 138 18 90 chr10 3905066 3905247 -141684041 - AluJo SINE Alu 0 312 164 2191 120 0 7 chr10 3905247 3905555 -141683733 - AluSg SINE Alu -4 306 1 1717 138 18 90 chr10 3905555 3905707 -141683581 - AluJo SINE Alu -148 164 3 416 282 8 8 chr10 3906902 3907019 -141682269 + Charlie8 DNA MER1_type 93 209 -2208 4109 126 21 11 chr10 3907225 3907854 -141681434 + MER41B LTR ERV1 1 635 0 228 323 72 60 chr10 3908042 3908209 -141681079 - MIR SINE MIR -55 207 39 1836 157 13 13 chr10 3908344 3908650 -141680638 + AluSx SINE Alu 1 306 -6 2338 105 0 6 chr10 3911043 3911358 -141677930 + AluSq SINE Alu 1 313 0 21 0 0 0 chr10 3912118 3912139 -141677149 + AT_rich Low_complexity Low_complexity 1 21 0 2070 134 0 3 chr10 3912142 3912447 -141676841 - AluSx SINE Alu -8 304 1 275 236 90 11 chr10 3912657 3912746 -141676542 + MER69 DNA AcHobo 99 194 -1032 927 221 43 59 chr10 3912808 3912935 -141676353 + MER69 DNA AcHobo 1457 1584 -942 1660 164 27 17 chr10 3912935 3913234 -141676054 + AluJo SINE Alu 1 302 -10 927 221 43 59 chr10 3913234 3913428 -141675860 + MER69 DNA AcHobo 1584 1773 -753 * 1524 251 70 13 chr10 3913420 3913950 -141675338 + MER69 DNA AcHobo 1959 2518 -8 2124 121 7 3 chr10 3913981 3914278 -141675010 - AluSg SINE Alu -12 298 1 199 218 135 113 chr10 3914785 3914918 -141674370 + L2 LINE L2 2727 2862 -452 24 0 0 0 chr10 3914918 3914942 -141674346 + AT_rich Low_complexity Low_complexity 1 24 0 2044 116 3 27 chr10 3914948 3915249 -141674039 - AluSx SINE Alu -18 294 1 186 304 163 11 chr10 3915445 3915537 -141673751 + L2 LINE L2 3196 3301 -12 392 0 21 0 chr10 3915698 3915746 -141673542 + (TTA)n Simple_repeat Simple_repeat 2 50 0 185 143 57 0 chr10 3915746 3915781 -141673507 - MIR SINE MIR -61 147 111 1743 151 7 11 chr10 3915885 3916164 -141673124 + AluJb SINE Alu 1 278 -34 1022 51 17 34 chr10 3916166 3916341 -141672947 + (GAAA)n Simple_repeat Simple_repeat 2 173 0 2125 120 3 0 chr10 3916525 3916817 -141672471 + AluSx SINE Alu 1 293 -19 182 321 54 36 chr10 3916835 3916947 -141672341 + MIR SINE MIR 30 143 -65 804 147 6 51 chr10 3916947 3916970 -141672318 + L1PA16 LINE L1 6018 6040 -126 1547 203 7 3 chr10 3916970 3917271 -141672017 + AluJo SINE Alu 1 302 -10 804 147 6 51 chr10 3917271 3917403 -141671885 + L1PA16 LINE L1 6040 6166 0 21 0 0 0 chr10 3917592 3917613 -141671675 + AT_rich Low_complexity Low_complexity 1 21 0 1562 205 7 4 chr10 3917740 3918038 -141671250 + AluJb SINE Alu 3 301 0 424 328 52 35 chr10 3919352 3919392 -141669896 - MLT1K LTR MaLR -5 583 545 1933 129 23 42 chr10 3919392 3919701 -141669587 - AluSq SINE Alu -10 303 1 424 328 52 35 chr10 3919701 3919889 -141669399 - MLT1K LTR MaLR -43 545 351 24 0 0 0 chr10 3920455 3920479 -141668809 + AT_rich Low_complexity Low_complexity 1 24 0 1477 164 4 9 chr10 3920479 3920705 -141668583 - AluSx SINE Alu -87 225 1 1439 134 5 0 chr10 3920707 3920923 -141668365 - AluSq SINE Alu -2 311 95 2102 149 3 0 chr10 3921660 3921968 -141667320 - AluSx SINE Alu -2 310 2 22 0 0 0 chr10 3922586 3922608 -141666680 + AT_rich Low_complexity Low_complexity 1 22 0 216 86 71 43 chr10 3922653 3922693 -141666595 + (TA)n Simple_repeat Simple_repeat 1 45 -27 1723 104 0 50 chr10 3922693 3922952 -141666336 - AluSc SINE Alu -19 290 45 216 86 71 43 chr10 3922952 3922981 -141666307 + (TA)n Simple_repeat Simple_repeat 45 72 0 1951 158 0 0 chr10 3924404 3924695 -141664593 + AluSx SINE Alu 1 291 -21 222 128 0 0 chr10 3924950 3924989 -141664299 + (CA)n Simple_repeat Simple_repeat 1 39 0 22 35 0 0 chr10 3925218 3925247 -141664041 + AT_rich Low_complexity Low_complexity 1 29 0 2433 64 0 10 chr10 3925825 3926120 -141663168 + AluY SINE Alu 1 292 -19 2289 169 14 43 chr10 3926961 3927094 -141662194 + MSTC LTR MaLR 2 137 -291 949 125 0 18 chr10 3927094 3927262 -141662026 + (TTTC)n Simple_repeat Simple_repeat 4 168 0 1996 139 0 0 chr10 3927262 3927542 -141661746 - AluSx SINE Alu -32 280 1 2289 169 14 43 chr10 3927542 3927845 -141661443 + MSTC LTR MaLR 135 426 -2 213 206 48 16 chr10 3929257 3929320 -141659968 + (CAGGG)n Simple_repeat Simple_repeat 2 66 0 230 271 43 50 chr10 3929905 3930045 -141659243 - MIR3 SINE MIR -62 146 8 808 189 0 0 chr10 3930627 3930759 -141658529 - THE1C LTR MaLR -243 132 1 198 0 0 0 chr10 3930924 3930946 -141658342 + (TC)n Simple_repeat Simple_repeat 2 23 0 187 236 125 28 chr10 3930988 3931060 -141658228 - L2 LINE L2 -20 3252 3174 2011 130 34 0 chr10 3931410 3931703 -141657585 - AluSx SINE Alu -9 303 1 792 190 72 5 chr10 3933540 3933735 -141655553 + MSTA LTR MaLR 1 208 -220 1963 107 66 19 chr10 3933764 3934083 -141655205 + MSTA LTR MaLR 95 428 0 345 266 98 60 chr10 3934160 3934666 -141654622 + L2 LINE L2 2646 3165 -148 1017 112 0 0 chr10 3935454 3935588 -141653700 + AluSg SINE Alu 1 134 -176 2552 63 0 0 chr10 3935588 3935887 -141653401 + AluY SINE Alu 1 299 -12 1751 191 16 22 chr10 3935958 3936325 -141652963 + MLT1A1 LTR MaLR 1 365 0 615 165 61 9 chr10 3936683 3936798 -141652490 - AluJo SINE Alu -176 136 16 2059 134 3 0 chr10 3937085 3937368 -141651920 + AluSx SINE Alu 6 289 -23 2691 185 25 10 chr10 3937401 3937920 -141651368 + L1MA9 LINE L1 5783 6309 -3 25 31 0 0 chr10 3937923 3937955 -141651333 + AT_rich Low_complexity Low_complexity 1 32 0 1911 145 3 0 chr10 3938730 3939193 -141650095 + AluSx SINE Alu 7 470 0 209 143 0 41 chr10 3939197 3939246 -141650042 + (GGAA)n Simple_repeat Simple_repeat 3 49 0 863 98 0 38 chr10 3940917 3941101 -141648187 + (CCCTAA)n Simple_repeat Simple_repeat 2 178 0 462 237 102 80 chr10 3941191 3941267 -141648021 - MLT1J LTR MaLR -4 507 434 1974 142 0 57 chr10 3941267 3941598 -141647690 - AluSx SINE Alu 0 312 1 462 237 102 80 chr10 3941598 3941795 -141647493 - MLT1J LTR MaLR -77 434 228 2484 77 3 0 chr10 3942311 3942611 -141646677 - AluSp SINE Alu -12 301 1 182 138 0 0 chr10 3942634 3942663 -141646625 - L2 LINE L2 0 3272 3244 247 266 13 0 chr10 3943492 3943571 -141645717 + (AATAG)n Simple_repeat Simple_repeat 4 83 0 656 216 15 26 chr10 3943732 3944077 -141645211 + CT-rich Low_complexity Low_complexity 1 340 0 26 0 0 0 chr10 3944333 3944359 -141644929 + AT_rich Low_complexity Low_complexity 1 26 0 215 215 92 15 chr10 3944471 3944536 -141644752 - L2 LINE L2 -62 3251 3182 369 251 20 29 chr10 3944572 3944685 -141644603 + L1MC1 LINE L1 6216 6329 -15 1965 154 3 0 chr10 3944685 3944996 -141644292 + AluJb SINE Alu 1 312 0 369 251 20 29 chr10 3944996 3945011 -141644277 + L1MC1 LINE L1 6329 6343 -1 260 211 218 30 chr10 3945414 3945547 -141643741 - L1ME3 LINE L1 -2 6160 6003 388 273 12 37 chr10 3945842 3946003 -141643285 + MIR SINE MIR 59 215 -47 225 0 0 0 chr10 3946384 3946409 -141642879 + (T)n Simple_repeat Simple_repeat 1 25 0 1123 211 4 4 chr10 3947344 3947571 -141641717 + L1PA15 LINE L1 5939 6165 0 21 0 0 0 chr10 3948137 3948158 -141641130 + AT_rich Low_complexity Low_complexity 1 21 0 668 257 19 10 chr10 3948485 3948691 -141640597 + MIR SINE MIR 41 248 -14 2289 113 3 0 chr10 3948697 3948998 -141640290 - AluSx SINE Alu -10 302 1 342 228 0 38 chr10 3949558 3949637 -141639651 - MLT1G LTR MaLR -474 81 6 5950 168 16 8 chr10 3950127 3951474 -141637814 + L1PA8 LINE L1 4819 6172 0 207 0 0 0 chr10 3952057 3952080 -141637208 + (T)n Simple_repeat Simple_repeat 1 23 0 1729 119 65 25 chr10 3953436 3953713 -141635575 - AluJo SINE Alu -24 288 1 2084 127 0 0 chr10 3954090 3954410 -141634878 - AluSq SINE Alu 0 320 1 2071 107 37 0 chr10 3955818 3956116 -141633172 - AluY SINE Alu -2 309 1 201 39 0 0 chr10 3956178 3956204 -141633084 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 257 319 80 0 chr10 3958596 3958709 -141630579 + MIR SINE MIR 119 240 -22 302 295 137 18 chr10 3958709 3959045 -141630243 - LTR16A LTR ERVL -4 446 71 22 0 0 0 chr10 3959692 3959714 -141629574 + AT_rich Low_complexity Low_complexity 1 22 0 1535 203 3 13 chr10 3960482 3960787 -141628501 - AluJo SINE Alu -10 302 1 628 313 127 17 chr10 3961812 3962231 -141627057 + MER69 DNA AcHobo 120 584 -642 * 1235 218 56 28 chr10 3962224 3962386 -141626902 + MER69 DNA AcHobo 2026 2182 -344 1857 167 0 3 chr10 3962386 3962686 -141626602 - AluJo SINE Alu -13 299 1 1235 218 56 28 chr10 3962686 3962949 -141626339 + MER69 DNA AcHobo 2182 2463 -63 336 302 54 0 chr10 3963596 3963725 -141625563 + L2 LINE L2 3173 3308 -5 285 316 177 69 chr10 3963766 3964344 -141624944 - L3 LINE CR1 -50 1527 856 2139 104 10 3 chr10 3964344 3964633 -141624655 - AluSg SINE Alu -19 291 1 285 316 177 69 chr10 3964633 3964767 -141624521 - L3 LINE CR1 -721 856 738 267 214 0 0 chr10 3964911 3964967 -141624321 - L2 LINE L2 -1 3312 3257 709 267 37 31 chr10 3965144 3965466 -141623822 + MER5C DNA MER1_type 1 324 0 2103 115 44 0 chr10 3965522 3965818 -141623470 - AluSg SINE Alu -1 309 1 230 318 30 0 chr10 3965994 3966060 -141623228 + L2 LINE L2 3205 3272 0 3160 170 22 74 chr10 3967106 3967835 -141621453 + LTR8 LTR ERV1 1 691 0 2154 103 3 3 chr10 3968450 3968740 -141620548 - AluSc SINE Alu -19 290 1 981 316 95 52 chr10 3969566 3970315 -141618973 + L2 LINE L2 1851 2631 -683 223 274 41 0 chr10 3970713 3970786 -141618502 - L2 LINE L2 -568 2746 2671 2202 153 23 8 chr10 3971839 3972193 -141617095 + THE1B LTR MaLR 5 363 -1 201 39 0 0 chr10 3975346 3975372 -141613916 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1402 245 114 38 chr10 3975770 3976244 -141613044 - MLT2B1 LTR ERVL -10 510 1 548 296 90 31 chr10 3976543 3976898 -141612390 + L1ME4a LINE L1 5508 5883 -238 1847 71 8 4 chr10 3977189 3977428 -141611860 + AluY SINE Alu 56 295 -16 3950 156 13 15 chr10 3977553 3978239 -141611049 + L1MA6 LINE L1 5616 6300 0 2212 109 0 20 chr10 3978301 3978604 -141610684 + AluSg SINE Alu 1 297 -13 313 295 0 27 chr10 3979586 3979698 -141609590 + MIR SINE MIR 152 260 -2 217 288 85 8 chr10 3980920 3981038 -141608250 + MIR SINE MIR 102 228 -34 486 332 25 20 chr10 3981190 3981392 -141607896 - MIR SINE MIR -48 214 12 997 155 54 0 chr10 3981756 3981924 -141607364 - AluJ SINE Alu -26 286 110 523 184 18 28 chr10 3982011 3982120 -141607168 - AluJ SINE Alu -203 109 2 349 207 27 0 chr10 3984818 3984929 -141604359 + C-rich Low_complexity Low_complexity 2 115 0 1484 154 91 58 chr10 3986805 3987168 -141602120 + THE1C LTR MaLR 1 375 0 2787 63 0 0 chr10 3987534 3987881 -141601407 - L1PA8 LINE L1 -4 6168 5822 392 35 0 221 chr10 3988234 3988320 -141600968 + MADE1 DNA Mariner 14 80 0 313 321 8 15 chr10 3988755 3988889 -141600399 - L2 LINE L2 -650 2664 2532 264 228 36 0 chr10 3988915 3989116 -141600172 + (TA)n Simple_repeat Simple_repeat 1 208 0 1778 167 37 0 chr10 3989127 3989427 -141599861 - AluSx SINE Alu -1 311 1 327 284 55 40 chr10 3989460 3989661 -141599627 - L2 LINE L2 -829 2485 2282 213 326 12 0 chr10 3990188 3990274 -141599014 - L2 LINE L2 -527 2787 2701 22 0 0 0 chr10 3990738 3990760 -141598528 + AT_rich Low_complexity Low_complexity 1 22 0 2116 115 18 0 chr10 3990767 3991053 -141598235 + AluSc SINE Alu 3 293 -16 195 300 108 33 chr10 3991560 3991680 -141597608 - MIR SINE MIR -74 188 60 25 0 0 0 chr10 3992557 3992582 -141596706 + AT_rich Low_complexity Low_complexity 1 25 0 335 210 25 76 chr10 3992717 3992836 -141596452 - Looper DNA T2_type -3 1555 1443 692 269 151 45 chr10 3992881 3993396 -141595892 + MLT1F1 LTR MaLR 1 565 -2 263 316 71 7 chr10 3993403 3993558 -141595730 - L1ME1 LINE L1 -4 6162 5998 1712 266 48 27 chr10 3993567 3994194 -141595094 - Looper DNA T2_type -782 776 137 424 204 79 130 chr10 3994191 3994263 -141595025 - Looper DNA T2_type -1343 215 141 * 1656 198 3 3 chr10 3994263 3994556 -141594732 - AluJb SINE Alu -19 293 1 424 204 79 130 chr10 3994556 3994699 -141594589 - Looper DNA T2_type -1417 141 11 1834 116 31 48 chr10 3995363 3995655 -141593633 + AluSx SINE Alu 8 294 -18 2390 78 7 0 chr10 3995655 3995951 -141593337 + AluY SINE Alu 1 298 -13 23 0 0 0 chr10 3996427 3996450 -141592838 + AT_rich Low_complexity Low_complexity 1 23 0 2270 90 13 13 chr10 3997894 3998205 -141591083 - AluSx SINE Alu -1 311 1 394 169 0 0 chr10 3999184 3999249 -141590039 - MER46A DNA MER2_type -2 234 170 1124 158 0 6 chr10 3999357 3999534 -141589754 - MER46A DNA MER2_type -60 176 1 447 241 6 63 chr10 3999645 3999819 -141589469 - MIR SINE MIR -11 251 88 610 257 94 62 chr10 4000480 4000854 -141588434 + L2 LINE L2 2920 3305 -8 391 178 14 14 chr10 4000938 4001011 -141588277 + MER63 DNA MER1_type 660 732 -328 1026 160 0 0 chr10 4001172 4001349 -141587939 + AluSg/x SINE Alu 135 311 0 264 349 47 0 chr10 4001409 4001558 -141587730 - MIR SINE MIR -49 213 58 492 329 18 9 chr10 4001792 4002020 -141587268 + MIR SINE MIR 33 262 0 252 258 21 75 chr10 4002416 4002509 -141586779 - MIR SINE MIR -102 160 73 318 26 0 0 chr10 4002724 4002763 -141586525 + (TAA)n Simple_repeat Simple_repeat 1 39 0 2212 112 0 0 chr10 4002769 4003056 -141586232 + AluSq SINE Alu 1 287 -26 4628 204 29 19 chr10 4003064 4004585 -141584703 - L1MA9 LINE L1 -28 6284 4747 1524 166 48 37 chr10 4004585 4004880 -141584408 - AluJb SINE Alu -14 298 1 4628 204 29 19 chr10 4004880 4004931 -141584357 - L1MA9 LINE L1 -1565 4747 4698 2111 130 0 0 chr10 4006642 4006934 -141582354 - AluSx SINE Alu -18 294 3 22 0 0 0 chr10 4006938 4006960 -141582328 + AT_rich Low_complexity Low_complexity 1 22 0 1984 146 0 22 chr10 4007217 4007533 -141581755 + AluSp SINE Alu 1 309 -4 26 30 0 0 chr10 4008927 4008960 -141580328 + AT_rich Low_complexity Low_complexity 1 33 0 2053 148 0 0 chr10 4009593 4009891 -141579397 - AluSx SINE Alu -14 298 1 2522 226 32 26 chr10 4010487 4010588 -141578700 - L1M4 LINE L1 -1081 5065 4966 1522 113 13 17 chr10 4010588 4010711 -141578577 + MER30 DNA MER1_type 1 124 -106 2390 87 0 0 chr10 4010711 4011009 -141578279 - AluSg SINE Alu -12 298 1 1522 113 13 17 chr10 4011009 4011116 -141578172 + MER30 DNA MER1_type 124 230 0 2522 226 32 26 chr10 4011116 4011757 -141577531 - L1M4 LINE L1 -1180 4966 4318 459 0 0 0 chr10 4011771 4011822 -141577466 + (TA)n Simple_repeat Simple_repeat 2 52 0 1189 102 0 0 chr10 4011824 4011971 -141577317 - AluSq/x SINE Alu -161 152 6 816 268 7 48 chr10 4011974 4012265 -141577023 - L1M4 LINE L1 -1821 4325 4047 23 0 0 0 chr10 4012382 4012405 -141576883 + AT_rich Low_complexity Low_complexity 1 23 0 919 111 0 15 chr10 4013347 4013482 -141575806 - AluSq/x SINE Alu -179 133 1 559 211 0 0 chr10 4014481 4014595 -141574693 + L1MA5A LINE L1 6179 6292 -5 397 187 0 44 chr10 4015719 4015810 -141573478 + Charlie8 DNA MER1_type 84 170 -2247 191 285 76 83 chr10 4016342 4016486 -141572802 + MIR SINE MIR 81 223 -39 2320 117 0 0 chr10 4018787 4019095 -141570193 - AluSc SINE Alu -1 308 1 186 324 40 14 chr10 4020614 4020688 -141568600 - MIR SINE MIR -69 193 118 629 271 86 51 chr10 4020795 4021223 -141568065 + MLT1J1 LTR MaLR 4 446 0 267 326 30 15 chr10 4021475 4021607 -141567681 - MIR SINE MIR -66 196 63 1984 123 36 10 chr10 4021680 4021981 -141567307 - AluSg SINE Alu -1 309 1 180 158 0 0 chr10 4022142 4022180 -141567108 + (TG)n Simple_repeat Simple_repeat 1 38 0 732 140 0 0 chr10 4022789 4022903 -141566385 - FLAM_C SINE Alu -15 118 5 2156 122 0 3 chr10 4022913 4023216 -141566072 - AluSx SINE Alu -10 302 1 189 0 0 0 chr10 4023228 4023249 -141566039 + (TAG)n Simple_repeat Simple_repeat 1 21 0 475 279 65 30 chr10 4024621 4024822 -141564466 + MER3 DNA MER1_type 2 209 0 468 145 15 30 chr10 4025292 4025423 -141563865 + CT-rich Low_complexity Low_complexity 4 132 0 514 206 5 33 chr10 4025460 4025644 -141563644 + C-rich Low_complexity Low_complexity 1 179 0 248 233 0 42 chr10 4025617 4025737 -141563551 + CT-rich Low_complexity Low_complexity 3 117 0 * 296 127 18 0 chr10 4025806 4025861 -141563427 + CT-rich Low_complexity Low_complexity 4 59 0 21 36 0 0 chr10 4027851 4027879 -141561409 + AT_rich Low_complexity Low_complexity 1 28 0 2116 139 7 0 chr10 4028117 4028427 -141560861 + AluSx SINE Alu 1 312 0 1792 213 11 8 chr10 4028595 4028957 -141560331 + MLT1A1 LTR MaLR 2 364 -1 248 320 13 0 chr10 4029684 4029759 -141559529 + L2 LINE L2 2863 2938 -376 700 255 45 25 chr10 4031016 4031216 -141558072 + MER20 DNA MER1_type 16 219 0 189 217 19 38 chr10 4031256 4031413 -141557875 + (TA)n Simple_repeat Simple_repeat 2 155 0 1042 83 0 0 chr10 4031564 4031696 -141557592 - AluSp/q SINE Alu -20 293 162 1213 195 77 49 chr10 4032036 4032323 -141556965 - AluJb SINE Alu -1 311 17 2119 92 20 31 chr10 4032599 4032892 -141556396 + AluSq SINE Alu 1 290 -23 221 0 0 33 chr10 4032895 4032925 -141556363 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1983 174 33 12 chr10 4033237 4033798 -141555490 - L1P5 LINE L1 -601 5555 4977 1934 152 40 0 chr10 4035148 4035444 -141553844 + AluSx SINE Alu 1 308 -4 25 51 0 0 chr10 4036152 4036191 -141553097 + AT_rich Low_complexity Low_complexity 1 39 0 310 255 113 0 chr10 4036780 4036886 -141552402 - MIR3 SINE MIR 0 208 91 2381 56 0 11 chr10 4038194 4038538 -141550750 + AluY SINE Alu 1 341 0 26 50 0 0 chr10 4042634 4042674 -141546614 + AT_rich Low_complexity Low_complexity 1 40 0 2057 112 11 0 chr10 4043264 4043550 -141545738 + AluSq SINE Alu 1 289 -24 273 57 0 0 chr10 4043554 4043589 -141545699 + (TG)n Simple_repeat Simple_repeat 2 36 0 453 141 0 0 chr10 4043589 4043662 -141545626 + (TA)n Simple_repeat Simple_repeat 1 73 0 255 173 0 0 chr10 4043665 4043717 -141545571 + LTR66 LTR ERVL 404 455 -155 1779 132 50 21 chr10 4044820 4045101 -141544187 - AluSx SINE Alu -23 289 1 382 335 29 50 chr10 4045523 4045765 -141543523 - MIR SINE MIR -17 245 9 198 71 0 0 chr10 4048325 4048353 -141540935 + (TG)n Simple_repeat Simple_repeat 2 29 0 1985 134 14 0 chr10 4048396 4048717 -141540571 + AluSx SINE Alu 1 325 0 1511 240 170 23 chr10 4049088 4049916 -141539372 - Charlie2 DNA MER1_type -43 2819 1870 1729 240 63 58 chr10 4051062 4051132 -141538156 - MER69 DNA AcHobo -10 2516 2448 1945 147 3 3 chr10 4051132 4051425 -141537863 + AluSx SINE Alu 1 293 -19 1729 240 63 58 chr10 4051425 4052415 -141536873 - MER69 DNA AcHobo -78 2448 1451 344 268 71 9 chr10 4052822 4052934 -141536354 - MER69 DNA AcHobo -868 358 240 1186 225 58 36 chr10 4053120 4053449 -141535839 - MLT1A2 LTR MaLR -18 356 21 21 36 0 0 chr10 4053534 4053562 -141535726 + AT_rich Low_complexity Low_complexity 1 28 0 1467 208 48 14 chr10 4053566 4053860 -141535428 + AluJo SINE Alu 1 304 -8 228 269 26 39 chr10 4054737 4054815 -141534473 - MLT1F1-int LTR MaLR -508 863 787 420 309 34 11 chr10 4055212 4055390 -141533898 - MLT1F1-int LTR MaLR -882 489 308 1216 277 136 14 chr10 4055544 4056045 -141533243 - MLT1F1 LTR MaLR -5 562 1 184 292 62 15 chr10 4056527 4056592 -141532696 + L2 LINE L2 3208 3275 -38 1350 180 30 26 chr10 4057530 4057797 -141531491 - MLT1B LTR MaLR -122 268 1 2034 151 0 0 chr10 4058185 4058484 -141530804 - AluSx SINE Alu -12 300 2 839 113 48 0 chr10 4059202 4059326 -141529962 + AluSq/x SINE Alu 4 133 -180 204 97 0 0 chr10 4059329 4059360 -141529928 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 262 414 9 0 chr10 4060244 4060360 -141528928 + L2 LINE L2 3151 3267 -5 2343 100 0 0 chr10 4060395 4060695 -141528593 - AluSx SINE Alu -12 300 1 239 114 0 0 chr10 4063207 4063242 -141526046 - MIR SINE MIR -109 153 119 901 207 98 37 chr10 4063265 4063511 -141525777 - MIR SINE MIR -1 261 1 21 0 0 0 chr10 4065392 4065413 -141523875 + AT_rich Low_complexity Low_complexity 1 21 0 707 219 0 0 chr10 4065413 4065527 -141523761 - FLAM_A SINE Alu -19 114 1 412 294 82 39 chr10 4065539 4065894 -141523394 + L1ME4a LINE L1 5567 5933 -188 255 61 0 0 chr10 4066054 4066087 -141523201 + (TA)n Simple_repeat Simple_repeat 1 33 0 265 333 12 0 chr10 4066244 4066328 -141522960 - MIR SINE MIR -137 125 41 1894 132 81 31 chr10 4066834 4067191 -141522097 - THE1C LTR MaLR 0 375 1 277 269 82 74 chr10 4067901 4068157 -141521131 + L1MEd LINE L1 602 859 -5260 40 37 0 0 chr10 4068178 4068232 -141521056 + AT_rich Low_complexity Low_complexity 1 54 0 242 213 16 47 chr10 4068234 4068361 -141520927 + (TTA)n Simple_repeat Simple_repeat 3 125 0 2253 112 0 10 chr10 4068506 4068809 -141520479 - AluSc SINE Alu -9 300 1 265 297 42 8 chr10 4068809 4068927 -141520361 + L1MEd LINE L1 902 1023 -5096 314 273 116 41 chr10 4069046 4069365 -141519923 + L1MEd LINE L1 1223 1565 -4745 320 321 21 7 chr10 4070162 4070302 -141518986 + L1MEd LINE L1 2126 2267 -3862 281 281 91 40 chr10 4070413 4070612 -141518676 + L1MEd LINE L1 2294 2502 -3627 230 349 116 0 chr10 4070658 4070830 -141518458 + MIR SINE MIR 71 262 0 2180 136 0 0 chr10 4072082 4072390 -141516898 + AluSx SINE Alu 1 308 -4 443 187 19 65 chr10 4072576 4072683 -141516605 - MER5B DNA MER1_type -74 104 3 29 78 0 0 chr10 4073669 4073733 -141515555 + AT_rich Low_complexity Low_complexity 1 64 0 22 0 0 0 chr10 4073789 4073811 -141515477 + AT_rich Low_complexity Low_complexity 1 22 0 289 344 68 68 chr10 4073854 4074249 -141515039 - L2 LINE L2 0 3313 2919 320 226 15 22 chr10 4075535 4075672 -141513616 + (TG)n Simple_repeat Simple_repeat 1 136 0 243 0 0 0 chr10 4075873 4075900 -141513388 + (T)n Simple_repeat Simple_repeat 1 27 0 2712 201 60 11 chr10 4076787 4077353 -141511935 - LTR51 LTR ERV1 -77 594 1 746 151 0 13 chr10 4078144 4078303 -141510985 + (TTAGGG)n Simple_repeat Simple_repeat 4 160 0 190 349 92 42 chr10 4078478 4078716 -141510572 - L2 LINE L2 -1273 2041 1792 668 251 0 6 chr10 4079111 4079278 -141510010 + MER104 DNA Tc2 14 179 -1 594 179 32 49 chr10 4080824 4080947 -141508341 - FLAM_C SINE Alu -19 124 4 759 224 21 47 chr10 4082204 4082262 -141507026 - AluJo SINE Alu -125 187 129 1494 103 3 94 chr10 4082262 4082614 -141506674 - AluSc SINE Alu 0 309 1 759 224 21 47 chr10 4082614 4082747 -141506541 - AluJo SINE Alu -183 129 1 229 163 20 0 chr10 4082748 4082797 -141506491 - L1MCc LINE L1 -5076 1865 1816 * 3040 251 54 4 chr10 4082794 4083794 -141505494 + L1ME3A LINE L1 3791 4840 -1306 934 157 13 0 chr10 4085166 4085319 -141503969 - AluSg/x SINE Alu -4 306 152 370 265 160 6 chr10 4085969 4086150 -141503138 + L2 LINE L2 3102 3310 -3 23 0 0 0 chr10 4086288 4086311 -141502977 + AT_rich Low_complexity Low_complexity 1 23 0 2226 317 84 34 chr10 4086801 4088176 -141501112 - L2 LINE L2 -811 2503 1059 262 254 82 9 chr10 4088179 4088289 -141500999 + HAL1 LINE L1 839 956 -1551 203 374 61 0 chr10 4088756 4088855 -141500433 + L2 LINE L2 3106 3210 -62 832 287 43 30 chr10 4088872 4089196 -141500092 + L1ME3A LINE L1 4960 5278 -884 1440 201 0 42 chr10 4089196 4089504 -141499784 - AluJo SINE Alu -17 295 1 832 287 43 30 chr10 4089504 4089996 -141499292 + L1ME3A LINE L1 5278 5789 -373 500 230 49 75 chr10 4090029 4090255 -141499033 + L1ME3A LINE L1 5942 6161 -9 27 0 0 0 chr10 4090900 4090927 -141498361 + AT_rich Low_complexity Low_complexity 1 27 0 190 269 239 0 chr10 4091406 4091473 -141497815 - L3b LINE CR1 -71 1512 1430 3150 67 24 40 chr10 4092018 4092469 -141496819 + MLT2A1 LTR ERVL 1 444 0 1294 250 118 34 chr10 4092576 4092994 -141496294 - L1MCc LINE L1 -4889 1534 1188 1272 211 157 59 chr10 4092994 4093505 -141495783 - MER34B LTR ERV1 0 565 5 1294 250 118 34 chr10 4093505 4093947 -141495341 - L1MCc LINE L1 -5235 1188 784 838 243 57 24 chr10 4094202 4094572 -141494716 - L1MCc LINE L1 -6025 398 17 280 283 130 22 chr10 4094891 4095121 -141494167 - L1M2 LINE L1 -744 5556 5302 201 39 0 0 chr10 4095262 4095288 -141494000 + (T)n Simple_repeat Simple_repeat 1 26 0 339 326 22 17 chr10 4095649 4095679 -141493609 - L1M4 LINE L1 -1089 5057 5029 1824 108 93 0 chr10 4095679 4095948 -141493340 - AluSx SINE Alu -18 294 1 339 326 22 17 chr10 4095948 4096095 -141493193 - L1M4 LINE L1 -1117 5029 4879 843 323 87 40 chr10 4096116 4096977 -141492311 - L1M4 LINE L1 -1331 4815 3914 468 305 316 21 chr10 4097049 4097566 -141491722 + L2 LINE L2 1132 1495 -1819 2149 127 0 3 chr10 4097566 4097866 -141491422 - AluSx SINE Alu -13 299 1 468 305 316 21 chr10 4097866 4097931 -141491357 + L2 LINE L2 1495 1886 -1428 968 316 169 50 chr10 4097945 4098780 -141490508 + L2 LINE L2 2140 3108 -205 2263 102 0 3 chr10 4098780 4099083 -141490205 - AluSx SINE Alu -10 302 1 968 316 169 50 chr10 4099083 4099294 -141489994 + L2 LINE L2 3108 3292 -21 675 331 38 44 chr10 4099333 4099856 -141489432 - L1M4 LINE L1 -2375 3771 3252 1908 192 67 23 chr10 4099938 4100459 -141488829 + L1MB3 LINE L1 5636 6179 -4 300 279 84 45 chr10 4100668 4100822 -141488466 - L1M4 LINE L1 -3146 3000 2841 293 122 0 0 chr10 4100914 4100963 -141488325 - L1MA9 LINE L1 -38 6274 6226 2879 111 45 189 chr10 4101082 4102000 -141487288 - LTR1 LTR ERV1 0 785 1 294 272 29 10 chr10 4102027 4102130 -141487158 - L1MA9 LINE L1 -164 6148 6044 25 51 0 0 chr10 4102251 4102290 -141486998 + AT_rich Low_complexity Low_complexity 1 39 0 36 64 0 0 chr10 4105017 4105064 -141484224 + AT_rich Low_complexity Low_complexity 1 47 0 1000 155 6 0 chr10 4105064 4105225 -141484063 - AluSg/x SINE Alu -1 311 150 289 325 60 17 chr10 4106348 4106465 -141482823 - L2 LINE L2 0 3313 3192 1471 201 34 20 chr10 4106469 4106872 -141482416 + L1MB3 LINE L1 5271 5669 -514 830 176 19 6 chr10 4106875 4107034 -141482254 + FRAM SINE Alu 1 158 -18 1831 206 91 2 chr10 4107044 4107516 -141481772 + L1MB3 LINE L1 5662 6175 -8 270 271 98 57 chr10 4107634 4107756 -141481532 - L2 LINE L2 -243 3029 2903 1039 128 137 0 chr10 4108567 4108771 -141480517 + L1M2 LINE L1 5558 5789 -502 232 203 0 17 chr10 4109551 4109610 -141479678 + (TA)n Simple_repeat Simple_repeat 1 58 0 186 43 0 0 chr10 4109637 4109649 -141479639 + (CA)n Simple_repeat Simple_repeat 1 35 0 186 43 0 0 chr10 4109649 4109672 -141479616 + (CA)n Simple_repeat Simple_repeat 2 24 0 210 143 0 0 chr10 4109739 4109774 -141479514 + (CATATA)n Simple_repeat Simple_repeat 2 36 0 747 269 12 64 chr10 4110328 4110577 -141478711 + L2 LINE L2 3078 3313 0 2317 113 0 0 chr10 4112081 4112391 -141476897 - AluSx SINE Alu 0 312 3 207 88 0 0 chr10 4112525 4112559 -141476729 + (A)n Simple_repeat Simple_repeat 1 34 0 296 297 80 14 chr10 4112582 4112720 -141476568 + MIR SINE MIR 82 228 -34 362 332 98 4 chr10 4113373 4113647 -141475641 + HsTC2 DNA Tc2 578 877 -1021 2198 106 0 0 chr10 4113824 4114161 -141475127 - AluSq SINE Alu 0 337 1 208 246 53 0 chr10 4116395 4116452 -141472836 + MIR SINE MIR 108 167 -95 264 250 50 70 chr10 4116473 4116573 -141472715 + L2 LINE L2 3211 3308 -5 234 326 47 0 chr10 4117007 4117093 -141472195 + L2 LINE L2 3150 3239 -33 2009 128 59 9 chr10 4117772 4118093 -141471195 - MER1B DNA MER1_type 0 337 1 2099 100 4 0 chr10 4119133 4119446 -141469842 + AluSg SINE Alu 1 314 0 477 312 69 26 chr10 4120922 4121111 -141468177 + MIR SINE MIR 2 198 -64 1433 228 39 15 chr10 4121411 4121749 -141467539 - MSTD LTR MaLR -50 346 1 1459 129 133 33 chr10 4122498 4122769 -141466519 - AluSg SINE Alu -12 298 1 1940 162 0 0 chr10 4123542 4123844 -141465444 + AluSx SINE Alu 6 307 -5 252 299 95 7 chr10 4124265 4124402 -141464886 + L1ME LINE L1 5514 5662 -502 528 313 83 25 chr10 4125291 4125569 -141463719 + HAL1 LINE L1 793 1086 -1421 275 224 59 0 chr10 4125624 4125709 -141463579 - L1MC2 LINE L1 -9 6335 6246 2371 63 10 20 chr10 4125772 4126073 -141463215 + AluY SINE Alu 5 302 -9 1272 242 72 14 chr10 4126179 4126691 -141462597 + L1M4 LINE L1 2965 3506 -2640 4422 206 154 57 chr10 4126716 4126773 -141462515 - L1MCa LINE L1 -4489 1937 1887 1635 166 7 18 chr10 4126773 4127050 -141462238 - AluJo SINE Alu 0 312 39 4422 206 154 57 chr10 4127050 4128725 -141460563 - L1MCa LINE L1 -4539 1887 37 479 282 136 84 chr10 4128786 4129300 -141459988 + HAL1 LINE L1 1088 1628 -879 180 176 0 0 chr10 4129800 4129834 -141459454 + GA-rich Low_complexity Low_complexity 3 36 0 674 178 24 17 chr10 4129847 4130463 -141458825 + GA-rich Low_complexity Low_complexity 1 619 0 387 0 0 0 chr10 4131501 4131544 -141457744 + (TA)n Simple_repeat Simple_repeat 1 43 0 183 42 0 0 chr10 4131544 4131568 -141457720 + (TG)n Simple_repeat Simple_repeat 2 25 0 2209 126 0 3 chr10 4132630 4132940 -141456348 + AluSx SINE Alu 1 309 -3 193 278 19 0 chr10 4133268 4133322 -141455966 + MIR SINE MIR 83 137 -71 2002 137 3 0 chr10 4133747 4134032 -141455256 - AluSx SINE Alu -26 286 1 4642 174 24 1 chr10 4135086 4135891 -141453397 + Tigger1 DNA MER2_type 1 823 -1595 3420 135 107 0 chr10 4135894 4136463 -141452825 + Tigger1 DNA MER2_type 1789 2418 0 2506 58 0 13 chr10 4136749 4137057 -141452231 + AluY SINE Alu 1 304 -7 456 276 62 67 chr10 4137357 4137698 -141451590 - MLT1G1 LTR MaLR -252 343 5 2079 115 0 11 chr10 4137880 4138204 -141451084 + AluSx SINE Alu 1 321 0 2450 185 85 39 chr10 4138454 4138962 -141450326 + LTR26B LTR ERV1 1 531 0 460 188 152 94 chr10 4139042 4139218 -141450070 + MLT1E1 LTR MaLR 1 194 -430 4853 107 1 65 chr10 4139218 4139779 -141449509 - LTR8 LTR ERV1 0 691 187 1973 121 32 4 chr10 4139779 4140059 -141449229 + AluSx SINE Alu 1 288 -24 4853 107 1 65 chr10 4140059 4140235 -141449053 - LTR8 LTR ERV1 -504 187 1 460 188 152 94 chr10 4140235 4140282 -141449006 + MLT1E1 LTR MaLR 194 237 -387 1791 203 62 52 chr10 4141078 4141296 -141447992 - LTR54 LTR ERV1 -3 507 293 3403 128 91 0 chr10 4141296 4141804 -141447484 + MER41C LTR ERV1 1 554 0 1791 203 62 52 chr10 4141804 4142087 -141447201 - LTR54 LTR ERV1 -217 293 1 1801 130 22 4 chr10 4142992 4143269 -141446019 - AluSx SINE Alu -30 282 1 288 274 0 24 chr10 4143883 4143967 -141445321 - L1MC4 LINE L1 -1347 6695 6614 203 235 0 15 chr10 4143968 4144036 -141445252 + (TATATG)n Simple_repeat Simple_repeat 2 68 0 357 24 0 0 chr10 4144067 4144109 -141445179 + (TG)n Simple_repeat Simple_repeat 2 43 0 1360 216 17 3 chr10 4144521 4144808 -141444480 - L1MB5 LINE L1 0 6174 5884 2181 99 3 3 chr10 4144905 4145221 -141444067 + AluSx SINE Alu 1 316 0 838 259 39 104 chr10 4145543 4145628 -141443660 - L1ME3A LINE L1 -309 5861 5772 1857 120 8 0 chr10 4145628 4145887 -141443401 + AluSx SINE Alu 1 261 -51 838 259 39 104 chr10 4145887 4146415 -141442873 - L1ME3A LINE L1 -398 5772 5288 201 263 0 0 chr10 4146875 4146932 -141442356 + T-rich Low_complexity Low_complexity 1 57 0 287 308 92 64 chr10 4147301 4147627 -141441661 - L1MB5 LINE L1 -461 5660 5323 1938 151 176 14 chr10 4147632 4147996 -141441292 - MSTA LTR MaLR -1 427 5 205 209 47 35 chr10 4147996 4148076 -141441212 + (TA)n Simple_repeat Simple_repeat 1 81 0 22 0 0 0 chr10 4148153 4148175 -141441113 + AT_rich Low_complexity Low_complexity 1 22 0 353 320 113 34 chr10 4148497 4148912 -141440376 - L1MEd LINE L1 -5232 887 440 2238 122 0 0 chr10 4151420 4151716 -141437572 - AluSx SINE Alu -16 296 1 2417 65 0 3 chr10 4152233 4152527 -141436761 + AluY SINE Alu 1 293 -18 240 145 26 26 chr10 4154409 4154485 -141434803 + (TAGA)n Simple_repeat Simple_repeat 1 76 0 241 231 19 0 chr10 4154491 4154543 -141434745 + GA-rich Low_complexity Low_complexity 1 53 0 240 255 85 32 chr10 4154625 4154719 -141434569 + LTR67 LTR ERVL 457 555 -2 2199 84 7 30 chr10 4155176 4155473 -141433815 + AluSc SINE Alu 12 301 -8 212 253 84 12 chr10 4155477 4155560 -141433728 + MIR SINE MIR 150 238 -24 337 204 43 21 chr10 4155602 4155695 -141433593 + MLT1J LTR MaLR 105 199 -312 21 71 0 0 chr10 4157483 4157525 -141431763 + AT_rich Low_complexity Low_complexity 1 42 0 583 201 45 126 chr10 4157583 4157987 -141431301 - HAL1 LINE L1 -1313 1194 824 231 90 154 64 chr10 4158006 4158084 -141431204 - HAL1 LINE L1 -2273 234 150 5018 178 30 5 chr10 4158092 4158631 -141430657 + L1PB4 LINE L1 4621 5145 -1011 303 28 0 0 chr10 4158631 4158667 -141430621 + (TAA)n Simple_repeat Simple_repeat 2 37 0 5018 178 30 5 chr10 4158667 4159570 -141429718 + L1PB4 LINE L1 5145 6101 -55 601 192 26 40 chr10 4159569 4159720 -141429568 - L1MB5 LINE L1 -794 5352 5204 * 267 79 0 0 chr10 4159809 4159847 -141429441 + L1PB4 LINE L1 6112 6149 -7 1801 127 9 67 chr10 4160485 4160815 -141428473 + AluSx SINE Alu 1 311 -1 207 239 0 22 chr10 4161615 4161661 -141427627 - MIR SINE MIR -187 75 31 2254 112 0 0 chr10 4162375 4162670 -141426618 + AluSx SINE Alu 2 296 -16 498 331 0 11 chr10 4162986 4163164 -141426124 + (TG)n Simple_repeat Simple_repeat 1 176 0 262 279 0 44 chr10 4163189 4163372 -141425916 + (TATATG)n Simple_repeat Simple_repeat 3 177 0 1870 99 23 11 chr10 4165500 4165762 -141423526 + AluSg1 SINE Alu 39 303 -6 1433 231 140 7 chr10 4166206 4166612 -141422676 + MER65C LTR ERV1 1 460 -1 2035 164 55 33 chr10 4168588 4169131 -141420157 - MLT2A2 LTR ERVL -1 553 1 3415 130 2 2 chr10 4170302 4170793 -141418495 + L1PB1 LINE L1 5661 6151 0 25 31 0 0 chr10 4171048 4171080 -141418208 + AT_rich Low_complexity Low_complexity 1 32 0 1590 176 23 20 chr10 4171820 4172126 -141417162 - AluJb SINE Alu -5 307 1 210 269 298 0 chr10 4173462 4173566 -141415722 - L2 LINE L2 0 3272 3138 1660 130 30 15 chr10 4173704 4173973 -141415315 - L1PA13 LINE L1 -110 6053 5781 264 223 117 21 chr10 4174136 4174230 -141415058 - MER5A DNA MER1_type -83 106 4 243 0 0 0 chr10 4174802 4174829 -141414459 + (A)n Simple_repeat Simple_repeat 1 27 0 4504 124 19 5 chr10 4175770 4176417 -141412871 - L1PA13 LINE L1 0 6163 5508 190 255 85 106 chr10 4176567 4176661 -141412627 - MIR SINE MIR -100 108 17 304 250 35 132 chr10 4179615 4179843 -141409445 + L2 LINE L2 2291 2496 -818 1273 169 8 36 chr10 4179872 4180120 -141409168 - AluJo SINE Alu -32 280 40 704 141 0 0 chr10 4180120 4180219 -141409069 - AluJ/FLAM SINE Alu -211 101 3 210 296 14 0 chr10 4180220 4180291 -141408997 + L2 LINE L2 2776 2847 -467 1050 90 0 0 chr10 4181520 4181692 -141407596 + AluSx SINE Alu 1 172 -344 2037 137 0 10 chr10 4181692 4182006 -141407282 + AluSx SINE Alu 1 311 -1 1050 90 0 0 chr10 4182006 4182036 -141407252 + AluSx SINE Alu 171 516 0 310 319 34 46 chr10 4182578 4182763 -141406525 + MIR3 SINE MIR 17 198 -10 483 134 12 0 chr10 4184554 4184659 -141404629 - AluSc SINE Alu 0 311 206 41 98 0 0 chr10 4186038 4186170 -141403118 + AT_rich Low_complexity Low_complexity 1 132 0 2130 71 10 24 chr10 4186396 4186710 -141402578 + AluY SINE Alu 3 311 0 711 215 19 66 chr10 4188040 4188296 -141400992 - MER31B LTR ERV1 -222 244 1 2147 119 14 0 chr10 4189634 4189929 -141399359 + AluSp SINE Alu 1 299 -14 774 269 23 5 chr10 4191789 4192005 -141397283 + L2 LINE L2 2420 2639 -675 220 295 96 75 chr10 4192058 4192444 -141396844 + L2 LINE L2 2829 3222 -91 203 138 0 0 chr10 4194398 4194427 -141394861 + (TAAG)n Simple_repeat Simple_repeat 3 31 0 629 181 8 0 chr10 4194507 4194640 -141394648 + GA-rich Low_complexity Low_complexity 2 135 0 181 343 95 19 chr10 4196732 4196837 -141392451 + L2 LINE L2 3200 3312 -1 1864 191 27 39 chr10 4197005 4197444 -141391844 - Tigger2a DNA MER2_type 0 434 1 34 55 0 0 chr10 4197506 4197561 -141391727 + AT_rich Low_complexity Low_complexity 1 55 0 329 329 0 77 chr10 4199024 4199037 -141390251 - MIR SINE MIR -81 181 169 1920 205 73 9 chr10 4199037 4199476 -141389812 - MLT1C LTR MaLR 0 467 1 329 329 0 77 chr10 4199476 4199617 -141389671 - MIR SINE MIR -93 169 39 235 214 0 0 chr10 4199968 4200010 -141389278 + polypyrimidine Low_complexity Low_complexity 2 43 0 23 0 0 0 chr10 4200175 4200198 -141389090 + AT_rich Low_complexity Low_complexity 1 23 0 2149 106 0 0 chr10 4204231 4204513 -141384775 + AluSx SINE Alu 1 282 -30 1748 157 42 12 chr10 4204719 4205051 -141384237 - L1PA15 LINE L1 0 6165 5824 208 313 104 26 chr10 4205459 4205574 -141383714 - L2 LINE L2 0 3313 3190 859 192 32 96 chr10 4205643 4205924 -141383364 + MLT2B1 LTR ERVL 5 267 -253 260 227 0 6 chr10 4205973 4206145 -141383143 + (TA)n Simple_repeat Simple_repeat 1 171 0 258 179 0 0 chr10 4206158 4206214 -141383074 + MLT2B1 LTR ERVL 460 515 0 2544 112 17 0 chr10 4206865 4207223 -141382065 - THE1B LTR MaLR 0 364 1 216 333 126 0 chr10 4208152 4208239 -141381049 + L2 LINE L2 3201 3298 -15 246 62 0 0 chr10 4208240 4208272 -141381016 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 1544 139 171 0 chr10 4209053 4209311 -141379977 - AluSx SINE Alu -10 302 1 480 231 110 50 chr10 4209672 4209854 -141379434 + MER58A DNA MER1_type 23 215 -9 2011 128 13 7 chr10 4209913 4210217 -141379071 + AluSx SINE Alu 1 306 -6 506 262 105 88 chr10 4210589 4210761 -141378527 + L1MEc LINE L1 2135 2302 -3913 2268 67 0 27 chr10 4210761 4211061 -141378227 - AluY SINE Alu -19 292 1 506 262 105 88 chr10 4211061 4211099 -141378189 + L1MEc LINE L1 2302 2338 -3877 1198 212 134 24 chr10 4211099 4211471 -141377817 + MLT2D LTR ERVL 1 413 -1 506 262 105 88 chr10 4211471 4211840 -141377448 + L1MEc LINE L1 2338 2686 -3529 813 189 9 0 chr10 4212579 4212807 -141376481 + (TCCA)n Simple_repeat Simple_repeat 1 230 0 480 305 7 13 chr10 4212845 4212996 -141376292 - L2 LINE L2 -6 3307 3158 2465 62 7 0 chr10 4214175 4214481 -141374807 + AluY SINE Alu 2 309 -2 243 61 0 0 chr10 4214563 4214596 -141374692 + (TGAA)n Simple_repeat Simple_repeat 2 34 0 183 362 0 0 chr10 4215433 4215491 -141373797 + L2 LINE L2 3245 3302 -11 21 0 0 0 chr10 4217041 4217062 -141372226 + AT_rich Low_complexity Low_complexity 1 21 0 8402 157 21 12 chr10 4217400 4218947 -141370341 + Tigger1 DNA MER2_type 2 1562 -856 1037 166 32 9 chr10 4218948 4219165 -141370123 + Tigger1 DNA MER2_type 2197 2418 0 2163 128 10 7 chr10 4219521 4219827 -141369461 + AluSx SINE Alu 3 309 -3 377 245 32 0 chr10 4220045 4220139 -141369149 - Tigger2 DNA MER2_type -10 2708 2612 3875 187 24 5 chr10 4220144 4220951 -141368337 - Tigger2 DNA MER2_type -1894 824 3 3507 107 4 4 chr10 4222343 4222867 -141366421 - L1PB1 LINE L1 -5 6146 5623 2143 107 3 75 chr10 4222869 4223406 -141365882 + L1PB1 LINE L1 5086 5597 -554 185 105 0 26 chr10 4226943 4226981 -141362307 + (CA)n Simple_repeat Simple_repeat 2 38 0 833 331 72 24 chr10 4230095 4230960 -141358328 - ERVL-F LTR ERVL -4424 1340 361 826 84 0 15 chr10 4231087 4231218 -141358070 + (TTTC)n Simple_repeat Simple_repeat 2 130 0 273 275 61 15 chr10 4231256 4231324 -141357964 - ERVL-F LTR ERVL -5624 140 77 309 51 0 0 chr10 4231324 4231363 -141357925 + (CA)n Simple_repeat Simple_repeat 2 40 0 273 275 61 15 chr10 4231363 4231425 -141357863 - ERVL-F LTR ERVL -5687 77 4 1133 252 89 14 chr10 4231469 4231818 -141357470 - MLT2F LTR ERVL -58 605 231 1117 222 5 0 chr10 4231865 4232063 -141357225 + AluJb SINE Alu 86 284 -28 246 302 101 23 chr10 4232082 4232211 -141357077 - MLT2F LTR ERVL -524 139 1 21 36 0 0 chr10 4234444 4234472 -141354816 + AT_rich Low_complexity Low_complexity 1 28 0 470 327 97 27 chr10 4234516 4234886 -141354402 + L2 LINE L2 1728 2123 -1191 281 293 97 94 chr10 4235087 4235292 -141353996 + L2 LINE L2 2560 2763 -509 1835 147 63 0 chr10 4235292 4235577 -141353711 - AluSx SINE Alu -9 303 1 281 293 97 94 chr10 4235577 4235849 -141353439 + L2 LINE L2 2763 3043 -229 2562 194 19 41 chr10 4235947 4236514 -141352774 - L1MB3 LINE L1 -339 5844 5290 22 0 0 0 chr10 4236540 4236562 -141352726 + AT_rich Low_complexity Low_complexity 1 22 0 783 195 24 76 chr10 4238954 4239164 -141350124 + MER20 DNA MER1_type 1 199 -20 1996 101 0 31 chr10 4239172 4239460 -141349828 + AluSx SINE Alu 1 279 -33 276 120 0 0 chr10 4239462 4239512 -141349776 + (CAAAA)n Simple_repeat Simple_repeat 1 50 0 1397 235 63 16 chr10 4240577 4240956 -141348332 - L1MC2 LINE L1 -9 6335 5939 338 288 74 25 chr10 4241449 4241612 -141347676 - MLT1J2 LTR MaLR -11 439 269 372 342 0 0 chr10 4241683 4241800 -141347488 - MLT1J1 LTR MaLR -291 155 39 418 223 51 9 chr10 4242214 4242351 -141346937 + L1ME3A LINE L1 6018 6168 -2 191 310 155 17 chr10 4242765 4242881 -141346407 + L2 LINE L2 3179 3310 -3 335 226 47 75 chr10 4243906 4244012 -141345276 + LTR16C LTR ERVL 387 489 -2 1383 170 46 87 chr10 4244675 4244998 -141344290 - AluJb SINE Alu -2 310 1 1333 51 11 0 chr10 4247390 4247568 -141341720 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2175 134 0 3 chr10 4247577 4247890 -141341398 - AluSx SINE Alu 0 312 1 246 32 0 0 chr10 4248419 4248450 -141340838 + (CA)n Simple_repeat Simple_repeat 2 32 0 219 182 61 0 chr10 4248867 4248933 -141340355 + (TAGA)n Simple_repeat Simple_repeat 1 70 0 247 270 112 77 chr10 4249045 4249304 -141339984 + L2 LINE L2 2636 2903 -411 287 263 94 88 chr10 4249575 4249746 -141339542 + LTR16A1 LTR ERVL 286 457 0 199 360 40 8 chr10 4249910 4250035 -141339253 + L2 LINE L2 3113 3241 -72 1562 198 10 30 chr10 4250649 4250787 -141338501 + AluJb SINE Alu 1 140 -172 2318 73 3 3 chr10 4250787 4251073 -141338215 + AluSp SINE Alu 24 309 -4 1562 198 10 30 chr10 4251073 4251232 -141338056 + AluJb SINE Alu 140 292 -20 26 0 0 0 chr10 4251261 4251287 -141338001 + AT_rich Low_complexity Low_complexity 1 26 0 542 304 203 14 chr10 4251310 4251665 -141337623 - L2 LINE L2 0 3313 2892 21 0 0 0 chr10 4252283 4252304 -141336984 + AT_rich Low_complexity Low_complexity 1 21 0 244 328 0 0 chr10 4252307 4252371 -141336917 + (TG)n Simple_repeat Simple_repeat 1 64 0 210 262 0 0 chr10 4252384 4252468 -141336820 + (TG)n Simple_repeat Simple_repeat 2 85 0 2929 80 3 0 chr10 4254043 4254395 -141334893 - THE1A LTR MaLR -1 354 2 1827 164 0 10 chr10 4255174 4255462 -141333826 + AluJo SINE Alu 1 286 -22 252 77 0 0 chr10 4255462 4255501 -141333787 + (CATA)n Simple_repeat Simple_repeat 2 40 0 346 289 91 5 chr10 4257298 4257485 -141331803 - HAL1 LINE L1 -588 1919 1717 390 270 39 103 chr10 4257548 4257781 -141331507 - HAL1 LINE L1 -1448 1059 842 423 0 0 0 chr10 4258122 4258169 -141331119 + (TA)n Simple_repeat Simple_repeat 2 48 0 1516 238 127 30 chr10 4259227 4259693 -141329595 + MLT2B2 LTR ERVL 1 511 -4 2345 125 0 3 chr10 4259868 4260259 -141329029 - L1PA10 LINE L1 -570 5598 5209 4097 93 28 0 chr10 4260259 4260794 -141328494 + L1PA10 LINE L1 5618 6168 0 1263 183 0 8 chr10 4261258 4261493 -141327795 - Tigger7 DNA MER2_type 0 2491 2259 271 182 0 0 chr10 4261512 4261556 -141327732 - Tigger7 DNA MER2_type -292 47 4 228 327 67 30 chr10 4261774 4261939 -141327349 - MIR SINE MIR -3 259 89 185 312 56 40 chr10 4264266 4264391 -141324897 + L2 LINE L2 2659 2785 -529 352 268 113 30 chr10 4264421 4264589 -141324699 + MIR SINE MIR 11 192 -70 927 184 5 40 chr10 4265035 4265236 -141324052 - MER39B LTR ERV1 0 653 460 2224 227 39 16 chr10 4265239 4265754 -141323534 + MER87 LTR ERV1 11 537 -4 2718 142 35 22 chr10 4265757 4266215 -141323073 - MER39B LTR ERV1 -189 464 1 1190 231 75 77 chr10 4266574 4267107 -141322181 - MER34B LTR ERV1 0 565 34 429 171 0 0 chr10 4268389 4268459 -141320829 + L1MA3 LINE L1 6180 6249 -56 612 141 0 0 chr10 4268462 4268554 -141320734 + L1MA1 LINE L1 6211 6302 0 1991 147 0 3 chr10 4270522 4270842 -141318446 - AluSx SINE Alu 0 312 7 2591 146 82 49 chr10 4271273 4271352 -141317936 - MER34B LTR ERV1 0 565 490 540 30 0 0 chr10 4271352 4271419 -141317869 + L1PB3 LINE L1 6087 6153 -1 2591 146 82 49 chr10 4271419 4271886 -141317402 - MER34B LTR ERV1 -75 490 1 1815 118 0 0 chr10 4272489 4272734 -141316554 - AluSx SINE Alu -4 308 64 1737 220 66 18 chr10 4274594 4275035 -141314253 + MLT1C LTR MaLR 6 467 0 2602 59 0 0 chr10 4275891 4276195 -141313093 + AluY SINE Alu 1 304 -7 31 26 0 0 chr10 4276286 4276324 -141312964 + AT_rich Low_complexity Low_complexity 1 38 0 26 0 0 0 chr10 4277030 4277056 -141312232 + AT_rich Low_complexity Low_complexity 1 26 0 23 68 0 0 chr10 4277471 4277515 -141311773 + AT_rich Low_complexity Low_complexity 1 44 0 1592 228 25 11 chr10 4277955 4278314 -141310974 - MLT1A1 LTR MaLR -1 364 1 27 0 0 0 chr10 4278470 4278497 -141310791 + AT_rich Low_complexity Low_complexity 1 27 0 757 287 75 37 chr10 4279128 4279584 -141309704 - L1ME3 LINE L1 -211 6020 5548 479 67 0 0 chr10 4279690 4279750 -141309538 + Alu SINE Alu 233 292 -18 269 208 0 56 chr10 4279753 4279825 -141309463 + MIR SINE MIR 172 239 -23 263 286 0 0 chr10 4279833 4279889 -141309399 + MIR SINE MIR 200 255 -7 1643 158 0 58 chr10 4279997 4280308 -141308980 + AluJb SINE Alu 1 293 -19 357 174 0 0 chr10 4280309 4280378 -141308910 + GA-rich Low_complexity Low_complexity 2 70 0 669 204 0 0 chr10 4281091 4281238 -141308050 + (CA)n Simple_repeat Simple_repeat 1 147 0 2601 64 0 0 chr10 4281270 4281581 -141307707 - AluY SINE Alu 0 311 1 1871 301 53 50 chr10 4281606 4282533 -141306755 + L2 LINE L2 584 1513 -1801 500 223 1 0 chr10 4282536 4282647 -141306641 - L1P1 LINE L1 -678 5477 5366 281 235 0 39 chr10 4282644 4282746 -141306542 - L1ME3 LINE L1 -955 5260 5163 * 773 200 0 0 chr10 4282754 4282881 -141306407 - FLAM_C SINE Alu -16 127 2 2228 250 51 38 chr10 4282881 4283668 -141305620 - L1ME3 LINE L1 -1034 5181 4385 3972 163 30 36 chr10 4283674 4284255 -141305033 - L1MB3 LINE L1 -3 6180 5604 1948 157 118 18 chr10 4284255 4284644 -141304644 + MSTA LTR MaLR 1 428 0 3972 163 30 36 chr10 4284644 4284933 -141304355 - L1MB3 LINE L1 -579 5604 5315 707 257 93 13 chr10 4284930 4285230 -141304058 - L1ME3 LINE L1 -2159 4056 3733 * 1611 299 48 19 chr10 4285271 4286070 -141303218 - L1ME3 LINE L1 -5381 1015 194 284 344 134 50 chr10 4286220 4286283 -141303005 - L3 LINE CR1 -30 1547 1491 2207 113 7 0 chr10 4286283 4286575 -141302713 - AluSx SINE Alu -18 294 1 284 344 134 50 chr10 4286575 4286869 -141302419 - L3 LINE CR1 -86 1491 1160 206 379 129 9 chr10 4287008 4287124 -141302164 - L2 LINE L2 -1 3271 3142 331 291 10 0 chr10 4287473 4287576 -141301712 + (TA)n Simple_repeat Simple_repeat 1 104 0 1022 163 113 0 chr10 4288126 4288347 -141300941 - L1PA16 LINE L1 0 6166 5921 2089 88 3 52 chr10 4288905 4289211 -141300077 - AluSp SINE Alu -22 291 1 24 53 0 0 chr10 4290239 4290277 -141299011 + AT_rich Low_complexity Low_complexity 1 38 0 549 150 20 0 chr10 4291029 4291129 -141298159 + MSTB LTR MaLR 1 102 -324 323 88 18 0 chr10 4291120 4291177 -141298111 + MSTB LTR MaLR 61 118 -310 * 228 79 26 0 chr10 4291287 4291325 -141297963 + MSTA LTR MaLR 76 114 -314 1640 184 35 6 chr10 4291325 4291668 -141297620 + MSTA LTR MaLR 76 428 0 239 240 13 0 chr10 4291725 4291800 -141297488 + (TCTA)n Simple_repeat Simple_repeat 1 76 0 1273 178 57 0 chr10 4291808 4292055 -141297233 - Tigger5 DNA MER2_type 0 2323 2063 1791 119 10 34 chr10 4292057 4292352 -141296936 + AluSq SINE Alu 23 310 -3 988 200 5 19 chr10 4292454 4292664 -141296624 + Tigger5 DNA MER2_type 2054 2260 -63 447 371 35 22 chr10 4294085 4294314 -141294974 + MIR SINE MIR 19 250 -12 1249 134 3 189 chr10 4294365 4294730 -141294558 + AluJb SINE Alu 1 297 -15 316 309 98 5 chr10 4296836 4296882 -141292406 + L1ME4a LINE L1 5893 5933 -188 1759 173 4 0 chr10 4296882 4297160 -141292128 + AluJb SINE Alu 1 279 -33 316 309 98 5 chr10 4297160 4297307 -141291981 + L1ME4a LINE L1 5933 6104 -17 2060 112 31 0 chr10 4298229 4298516 -141290772 - AluSq SINE Alu -10 303 8 196 211 123 0 chr10 4298640 4298697 -141290591 + MIR SINE MIR 83 146 -62 1867 188 18 13 chr10 4298754 4299142 -141290146 + MLT1B LTR MaLR 1 390 0 230 378 71 0 chr10 4299505 4299632 -141289656 + MIR3 SINE MIR 58 193 -15 1482 125 51 0 chr10 4299781 4299997 -141289291 + AluSg/x SINE Alu 72 298 -12 1166 190 112 37 chr10 4300132 4300453 -141288835 - MER7A DNA MER2_type -3 343 1 183 200 27 13 chr10 4300609 4300684 -141288604 + (TA)n Simple_repeat Simple_repeat 2 77 0 369 109 0 0 chr10 4300719 4300774 -141288514 + (TA)n Simple_repeat Simple_repeat 2 56 0 225 322 154 43 chr10 4300784 4300992 -141288296 + MIR SINE MIR 32 262 0 294 180 0 0 chr10 4301372 4301433 -141287855 + CT-rich Low_complexity Low_complexity 4 64 0 1081 60 16 28 chr10 4301449 4301631 -141287657 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1894 169 3 19 chr10 4301639 4301946 -141287342 - AluSx SINE Alu -10 302 1 288 211 0 0 chr10 4302110 4302186 -141287102 + CT-rich Low_complexity Low_complexity 1 76 0 250 235 0 29 chr10 4302216 4302239 -141287049 + MER3 DNA MER1_type 27 47 -162 575 259 52 5 chr10 4302239 4302432 -141286856 - MER3 DNA MER1_type 0 209 8 521 398 46 16 chr10 4302633 4303131 -141286157 + L3 LINE CR1 929 1441 -136 2037 128 3 0 chr10 4303225 4303533 -141285755 + AluSx SINE Alu 1 309 0 1397 183 44 24 chr10 4303867 4304204 -141285084 - MLT1C LTR MaLR 0 467 118 531 168 19 9 chr10 4304204 4304311 -141284977 - AluJb SINE Alu -13 299 192 600 142 8 90 chr10 4304311 4304445 -141284843 - MLT1C LTR MaLR -267 123 1 377 326 54 32 chr10 4304536 4304849 -141284439 + L2 LINE L2 2709 3022 -250 310 310 138 4 chr10 4304964 4305295 -141283993 + L1ME3 LINE L1 5728 6119 -45 390 130 0 0 chr10 4307021 4307090 -141282198 + MER66A LTR ERV1 410 478 0 2089 154 0 0 chr10 4307179 4307477 -141281811 - AluSx SINE Alu -14 298 1 21 0 0 0 chr10 4307522 4307543 -141281745 + AT_rich Low_complexity Low_complexity 1 21 0 2269 120 0 0 chr10 4307559 4307858 -141281430 - AluSx SINE Alu -13 299 1 772 319 107 18 chr10 4309761 4310418 -141278870 - L2 LINE L2 -298 3015 2294 637 105 11 0 chr10 4310995 4311090 -141278198 + L1PB2 LINE L1 6053 6148 -3 25 0 0 0 chr10 4311090 4311115 -141278173 + AT_rich Low_complexity Low_complexity 1 25 0 3537 172 12 10 chr10 4311569 4312260 -141277028 - L1MB7 LINE L1 -9 6175 5484 307 90 254 0 chr10 4312276 4312343 -141276945 + L1MB3 LINE L1 6081 6164 -19 2783 102 0 10 chr10 4312363 4312775 -141276513 - L1PB1 LINE L1 0 6151 5744 532 290 58 91 chr10 4313210 4313638 -141275650 + MLT1J2 LTR MaLR 32 445 -5 1220 237 56 58 chr10 4314068 4314638 -141274650 + MER34B LTR ERV1 3 585 0 353 284 60 8 chr10 4314727 4314861 -141274427 - L2 LINE L2 0 3272 3132 231 384 15 8 chr10 4317168 4317301 -141271987 - L2 LINE L2 -6 3266 3133 354 303 21 14 chr10 4317423 4317565 -141271723 + MIR SINE MIR 86 228 -34 189 292 0 15 chr10 4318039 4318104 -141271184 - MIR SINE MIR 0 262 199 237 307 13 0 chr10 4318207 4318282 -141271006 - MIR SINE MIR -82 180 105 2254 128 0 0 chr10 4319645 4319951 -141269337 + AluSx SINE Alu 1 306 -6 1201 132 57 0 chr10 4320165 4320377 -141268911 + L1MA5A LINE L1 6071 6294 -3 23 54 0 0 chr10 4320967 4321004 -141268284 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr10 4321053 4321074 -141268214 + AT_rich Low_complexity Low_complexity 1 21 0 305 330 61 45 chr10 4321508 4321838 -141267450 + L1MC/D LINE L1 425 759 -5360 22 0 0 0 chr10 4321869 4321891 -141267397 + AT_rich Low_complexity Low_complexity 1 22 0 396 298 70 85 chr10 4321963 4322104 -141267184 + L1MC/D LINE L1 900 1042 -5077 360 64 0 0 chr10 4322104 4322151 -141267137 + (CA)n Simple_repeat Simple_repeat 1 47 0 396 298 70 85 chr10 4322151 4322338 -141266950 + L1MC/D LINE L1 1042 1223 -4896 343 316 134 20 chr10 4322473 4322869 -141266419 + L1MC/D LINE L1 2806 3246 -2883 538 121 165 0 chr10 4322870 4322961 -141266327 + AluSc SINE Alu 155 260 -49 402 361 24 33 chr10 4323085 4323415 -141265873 + L1MC/D LINE L1 4943 5269 -860 383 328 54 20 chr10 4323448 4323854 -141265434 + L1MC/D LINE L1 5311 5730 -2061 303 312 118 94 chr10 4325200 4325572 -141263716 + L1ME3A LINE L1 677 1057 -5473 2093 120 3 23 chr10 4325690 4326026 -141263262 + AluSx SINE Alu 1 312 0 323 286 5 43 chr10 4326169 4326354 -141262934 + L1ME3A LINE L1 1410 1587 -4943 230 300 38 0 chr10 4326542 4326622 -141262666 + L1ME3A LINE L1 1712 1794 -4748 321 289 117 49 chr10 4326987 4327253 -141262035 + L1ME3A LINE L1 2365 2648 -3892 342 312 76 30 chr10 4327348 4327611 -141261677 + L1ME3A LINE L1 3815 4089 -2451 604 307 63 8 chr10 4327676 4328041 -141261247 + L1ME3A LINE L1 4233 4617 -1923 367 318 90 67 chr10 4328128 4328619 -141260669 + L1ME3A LINE L1 4735 5236 -1304 843 141 33 0 chr10 4329043 4329164 -141260124 - FLAM_C SINE Alu -18 125 1 5031 163 22 9 chr10 4330099 4331078 -141258210 - L1MC1 LINE L1 -5 6328 5337 36 40 0 0 chr10 4332723 4332773 -141256515 + AT_rich Low_complexity Low_complexity 1 50 0 28 29 0 0 chr10 4333573 4333608 -141255680 + AT_rich Low_complexity Low_complexity 1 35 0 940 288 138 14 chr10 4334346 4334869 -141254419 + L1ME3A LINE L1 5969 6555 -9 285 281 104 18 chr10 4334865 4335029 -141254259 + L1ME4a LINE L1 5943 6120 -1 * 4979 245 60 31 chr10 4335665 4338708 -141250580 - L1MD2 LINE L1 -2 6617 3490 1816 287 17 4 chr10 4338718 4339412 -141249876 - L1MD2 LINE L1 -3218 3188 2486 1363 312 9 27 chr10 4339544 4339989 -141249299 - L1MD2 LINE L1 -5965 444 8 525 305 0 8 chr10 4340362 4340493 -141248795 + MER5A DNA MER1_type 1 130 -59 2433 45 3 0 chr10 4340516 4340808 -141248480 - AluY SINE Alu -18 293 1 199 329 14 0 chr10 4340835 4340908 -141248380 - L2 LINE L2 -1454 1860 1787 1905 181 57 24 chr10 4341377 4341797 -141247491 + Tigger2a DNA MER2_type 1 434 0 248 154 31 31 chr10 4342069 4342134 -141247154 + (TG)n Simple_repeat Simple_repeat 2 66 0 771 169 0 0 chr10 4342279 4342397 -141246891 - FLAM_C SINE Alu -25 118 1 212 200 50 0 chr10 4342978 4343058 -141246230 + (TA)n Simple_repeat Simple_repeat 1 84 0 22 70 0 0 chr10 4343723 4343766 -141245522 + AT_rich Low_complexity Low_complexity 1 43 0 27 49 0 0 chr10 4343978 4344019 -141245269 + AT_rich Low_complexity Low_complexity 1 41 0 180 0 0 0 chr10 4344417 4344437 -141244851 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1829 128 39 7 chr10 4344439 4344594 -141244694 - AluSx SINE Alu -21 291 122 279 0 0 0 chr10 4344594 4344625 -141244663 + (TG)n Simple_repeat Simple_repeat 2 32 0 1829 128 39 7 chr10 4344625 4344751 -141244537 - AluSx SINE Alu -190 122 1 260 360 43 0 chr10 4344753 4344892 -141244396 - L2 LINE L2 -535 2779 2635 356 278 110 86 chr10 4345200 4345445 -141243843 + MIR SINE MIR 12 262 0 273 299 88 15 chr10 4348404 4348541 -141240747 - L2 LINE L2 -6 3307 3161 227 350 68 23 chr10 4348846 4349066 -141240222 - MIR SINE MIR -13 249 20 1770 170 47 19 chr10 4349503 4349868 -141239420 - THE1C LTR MaLR 0 375 1 581 124 0 0 chr10 4350365 4350462 -141238826 - L1PA15 LINE L1 -8 6157 6061 2891 253 49 31 chr10 4350569 4351722 -141237566 - L1M4 LINE L1 -2498 3648 2475 1091 255 83 85 chr10 4351782 4352531 -141236757 - L1MCb LINE L1 -5298 747 1 188 320 13 13 chr10 4353559 4353634 -141235654 + L2 LINE L2 3195 3269 -3 298 295 32 0 chr10 4354411 4354506 -141234782 - MER5A DNA MER1_type -79 110 13 438 250 52 0 chr10 4354748 4354864 -141234424 + MIR SINE MIR 111 232 -30 1538 154 33 46 chr10 4354943 4355249 -141234039 - AluJb SINE Alu -10 302 1 723 250 5 21 chr10 4355290 4355478 -141233810 - MER5A DNA MER1_type -1 188 4 231 36 0 0 chr10 4356061 4356089 -141233199 + (CCTG)n Simple_repeat Simple_repeat 1 28 0 2152 114 0 0 chr10 4356968 4357296 -141231992 + AluSx SINE Alu 4 331 0 188 310 23 11 chr10 4358047 4358134 -141231154 - L2 LINE L2 -462 2852 2765 1297 199 153 3 chr10 4359393 4359694 -141229594 + MER7A DNA MER2_type 3 346 0 631 296 151 20 chr10 4359704 4360102 -141229186 - MLT1J2 LTR MaLR 0 450 1 228 235 20 0 chr10 4360249 4360300 -141228988 + CT-rich Low_complexity Low_complexity 4 55 0 832 121 14 0 chr10 4361374 4361515 -141227773 + (GAAA)n Simple_repeat Simple_repeat 2 144 0 1942 104 7 0 chr10 4362829 4363099 -141226189 + THE1B LTR MaLR 93 364 0 1626 220 24 69 chr10 4363318 4363781 -141225507 - MLT2B1 LTR ERVL -74 446 5 2092 118 0 0 chr10 4363890 4364208 -141225080 - AluSg SINE Alu 0 318 1 33 0 0 0 chr10 4364739 4364772 -141224516 + AT_rich Low_complexity Low_complexity 1 33 0 312 312 109 18 chr10 4365403 4365679 -141223609 + L1ME2 LINE L1 4950 5250 -896 * 766 308 72 39 chr10 4365671 4366269 -141223019 + L1ME LINE L1 20 637 -5433 284 301 0 0 chr10 4366503 4366596 -141222692 + L1ME LINE L1 537 629 -5441 276 312 0 0 chr10 4366615 4366708 -141222580 + L1ME LINE L1 537 629 -5441 898 229 41 28 chr10 4366735 4367098 -141222190 + L1ME LINE L1 545 912 -5158 878 265 59 97 chr10 4367102 4367709 -141221579 + L1ME2 LINE L1 5494 6077 -87 21 36 0 0 chr10 4367779 4367807 -141221481 + AT_rich Low_complexity Low_complexity 1 28 0 1752 154 4 18 chr10 4369503 4369782 -141219506 + AluJb SINE Alu 3 277 -35 180 273 146 0 chr10 4371392 4371447 -141217841 + MIR SINE MIR 57 119 -143 351 184 23 35 chr10 4371665 4371752 -141217536 + MER89 LTR ERV1 1 86 -473 316 210 105 24 chr10 4371726 4371850 -141217438 + MER89 LTR ERV1 197 330 -229 * 1985 160 77 34 chr10 4372646 4373156 -141216132 + MLT2A2 LTR ERVL 3 554 0 1120 220 118 32 chr10 4373228 4373601 -141215687 + MER119 DNA MER1_type 176 580 -3 522 83 0 0 chr10 4375233 4375305 -141213983 + (TA)n Simple_repeat Simple_repeat 1 72 0 7285 35 3 0 chr10 4376000 4377219 -141212069 - L1PA4 LINE L1 -20 6135 4913 904 284 99 19 chr10 4378885 4379516 -141209772 - L1ME3A LINE L1 -5 6165 5453 1679 191 52 14 chr10 4382326 4382688 -141206600 - MLT1B LTR MaLR -14 376 1 2470 54 0 3 chr10 4383179 4383476 -141205812 - AluY SINE Alu -15 296 1 779 194 0 8 chr10 4384222 4384356 -141204932 + FLAM_C SINE Alu 1 133 -10 2169 102 0 10 chr10 4384370 4384665 -141204623 - AluSx SINE Alu -16 296 5 39 60 0 0 chr10 4384921 4384988 -141204300 + AT_rich Low_complexity Low_complexity 1 67 0 507 260 46 4 chr10 4385135 4385307 -141203981 + MER92A LTR ERV1 264 412 0 24 0 0 0 chr10 4387390 4387414 -141201874 + AT_rich Low_complexity Low_complexity 1 24 0 256 229 14 14 chr10 4387831 4387901 -141201387 + CT-rich Low_complexity Low_complexity 2 71 0 185 324 73 0 chr10 4388127 4388195 -141201093 - MER5A DNA MER1_type 0 189 117 22 0 0 0 chr10 4388689 4388711 -141200577 + AT_rich Low_complexity Low_complexity 1 22 0 2333 106 0 3 chr10 4389381 4389693 -141199595 + AluY SINE Alu 1 311 0 22 0 0 0 chr10 4389778 4389800 -141199488 + AT_rich Low_complexity Low_complexity 1 22 0 1089 197 10 10 chr10 4389955 4390163 -141199125 + AluJo SINE Alu 87 294 -18 1901 180 107 7 chr10 4390439 4390877 -141198411 - MER31A LTR ERV1 0 485 4 1694 194 61 16 chr10 4391139 4391749 -141197539 + MER39 LTR ERV1 2 701 -6 25 31 0 0 chr10 4393086 4393118 -141196170 + AT_rich Low_complexity Low_complexity 1 32 0 1121 216 24 0 chr10 4393579 4393833 -141195455 + MER57A LTR ERV1 1 260 -143 235 362 12 0 chr10 4394375 4394538 -141194750 + (CACTT)n Simple_repeat Simple_repeat 2 166 0 220 307 21 14 chr10 4395170 4395310 -141193978 + (CTTTA)n Simple_repeat Simple_repeat 3 143 0 244 64 21 0 chr10 4395354 4395401 -141193887 + MER57A LTR ERV1 215 262 -141 258 358 0 6 chr10 4395509 4395688 -141193600 + (CTTTA)n Simple_repeat Simple_repeat 2 179 0 244 64 21 0 chr10 4395691 4395738 -141193550 + MER57A LTR ERV1 215 262 -141 219 297 29 17 chr10 4395748 4395923 -141193365 + (CACTT)n Simple_repeat Simple_repeat 4 180 0 273 301 45 0 chr10 4398055 4398211 -141191077 - MER117 DNA MER1_type -5 192 30 1370 196 9 82 chr10 4401475 4401937 -141187351 - AluJb SINE Alu 0 438 1 197 339 161 37 chr10 4402319 4402673 -141186615 - L3 LINE CR1 -761 816 419 206 303 76 41 chr10 4403315 4403460 -141185828 + L2 LINE L2 2380 2529 -785 207 356 29 10 chr10 4406001 4406105 -141183183 + L2 LINE L2 3164 3269 -3 322 194 37 46 chr10 4406412 4406520 -141182768 + MER69 DNA AcHobo 2408 2514 -12 22 0 0 0 chr10 4406955 4406977 -141182311 + AT_rich Low_complexity Low_complexity 1 22 0 246 267 12 12 chr10 4407205 4407291 -141181997 + LTR67 LTR ERVL 459 544 -13 215 241 37 19 chr10 4407305 4407359 -141181929 - MIR3 SINE MIR -36 172 118 292 236 18 0 chr10 4407897 4408007 -141181281 + (CA)n Simple_repeat Simple_repeat 1 112 0 406 261 12 0 chr10 4408030 4408195 -141181093 + (CA)n Simple_repeat Simple_repeat 1 167 0 2650 227 24 27 chr10 4408863 4409573 -141179715 + L1MB5 LINE L1 5431 6138 -36 248 213 33 0 chr10 4411423 4411545 -141177743 + (TG)n Simple_repeat Simple_repeat 2 127 0 401 133 13 0 chr10 4411800 4411875 -141177413 + GA-rich Low_complexity Low_complexity 3 78 0 2264 107 0 0 chr10 4412831 4413120 -141176168 - AluSq SINE Alu -24 289 1 198 143 0 0 chr10 4413249 4413284 -141176004 + (TG)n Simple_repeat Simple_repeat 2 36 0 330 289 0 11 chr10 4413287 4413377 -141175911 + L1MC4 LINE L1 6614 6702 -1340 209 186 35 12 chr10 4413481 4413567 -141175721 + (TA)n Simple_repeat Simple_repeat 2 89 0 271 198 23 47 chr10 4414118 4414204 -141175084 - L1MEc LINE L1 -6274 122 39 2425 51 7 0 chr10 4415628 4415923 -141173365 + AluY SINE Alu 1 297 -14 1025 222 100 14 chr10 4416543 4416898 -141172390 - MLT1C LTR MaLR 0 467 81 906 83 0 0 chr10 4416898 4417019 -141172269 + L1PA13 LINE L1 6030 6150 -13 953 203 0 0 chr10 4417029 4417192 -141172096 + FRAM SINE Alu 1 160 -16 256 234 39 0 chr10 4417246 4417323 -141171965 - MLT1C LTR MaLR -387 80 1 188 352 159 27 chr10 4417677 4418049 -141171239 + L2 LINE L2 2319 2739 -575 1193 191 88 27 chr10 4418159 4418489 -141170799 - MLT1A1 LTR MaLR 0 365 16 256 335 113 38 chr10 4418647 4418886 -141170402 + L2 LINE L2 3003 3259 -54 1080 246 85 79 chr10 4421393 4422003 -141167285 - MLT1E2 LTR MaLR -2 624 9 1674 194 10 0 chr10 4422007 4422301 -141166987 + AluJo SINE Alu 1 297 -15 3149 167 87 22 chr10 4422430 4423108 -141166180 - MER72 LTR ERV1 0 722 1 21 57 0 0 chr10 4423723 4423758 -141165530 + AT_rich Low_complexity Low_complexity 1 35 0 2336 103 0 3 chr10 4424327 4424639 -141164649 - AluSq SINE Alu -2 311 1 3241 238 103 15 chr10 4425549 4426756 -141162532 + Charlie1 DNA MER1_type 1449 2761 0 33 0 0 0 chr10 4427990 4428023 -141161265 + AT_rich Low_complexity Low_complexity 1 33 0 265 230 0 23 chr10 4428314 4428401 -141160887 + (CATA)n Simple_repeat Simple_repeat 4 88 0 184 206 15 132 chr10 4428411 4428479 -141160809 + MIR SINE MIR 89 148 -60 1619 197 13 7 chr10 4428483 4428783 -141160505 + AluJo SINE Alu 1 302 -10 189 213 0 0 chr10 4429093 4429140 -141160148 + GA-rich Low_complexity Low_complexity 1 47 0 213 146 24 0 chr10 4430401 4430442 -141158846 + A-rich Low_complexity Low_complexity 1 42 0 24 0 0 0 chr10 4431157 4431181 -141158107 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr10 4431458 4431480 -141157808 + AT_rich Low_complexity Low_complexity 1 22 0 427 279 19 25 chr10 4431540 4431698 -141157590 - L1MD3 LINE L1 -137 7858 7702 1499 28 0 11 chr10 4431725 4431907 -141157381 + L1PA3 LINE L1 5976 6155 0 3338 257 57 51 chr10 4432005 4432349 -141156939 - L1MB7 LINE L1 0 6184 5844 1827 149 0 17 chr10 4432349 4432650 -141156638 - AluJo SINE Alu -16 296 1 3338 257 57 51 chr10 4432650 4435064 -141154224 - L1MB7 LINE L1 -340 5844 3446 1686 166 3 21 chr10 4435064 4435383 -141153905 + AluJb SINE Alu 1 314 0 3338 257 57 51 chr10 4435383 4436266 -141153022 - L1MB7 LINE L1 -2738 3446 3786 2060 144 32 16 chr10 4436266 4436635 -141152653 + THE1C LTR MaLR 1 375 0 3338 257 57 51 chr10 4436635 4437001 -141152287 - L1MB7 LINE L1 -2397 3787 3425 6032 249 44 50 chr10 4437116 4439763 -141149525 + L1M4 LINE L1 2467 5098 -1048 404 238 10 0 chr10 4439811 4439912 -141149376 + L1MC1 LINE L1 6232 6333 0 2227 102 0 0 chr10 4439935 4440229 -141149059 - AluSc SINE Alu -15 294 1 1894 144 30 7 chr10 4440458 4440757 -141148531 + AluSx SINE Alu 1 306 -6 358 274 108 0 chr10 4441100 4441257 -141148031 + MIR SINE MIR 89 262 0 954 231 158 7 chr10 4441532 4441830 -141147458 + MER2 DNA MER2_type 1 343 -1 2613 259 41 18 chr10 4441854 4442314 -141146974 - L1MC4 LINE L1 0 8042 7553 782 187 42 61 chr10 4442314 4442528 -141146760 + MER6B DNA MER2_type 1 210 0 2613 259 41 18 chr10 4442528 4442904 -141146384 - L1MC4 LINE L1 -489 7553 7187 2316 160 42 7 chr10 4443548 4443955 -141145333 + MSTB LTR MaLR 6 426 0 620 313 27 30 chr10 4448609 4448871 -141140417 - MIR SINE MIR 0 262 2 6778 160 51 24 chr10 4449670 4450970 -141138318 - Tigger1 DNA MER2_type 0 2418 1084 2323 164 32 50 chr10 4450976 4451475 -141137813 - Tigger1 DNA MER2_type -1928 490 1 208 285 159 46 chr10 4452408 4452559 -141136729 + L3 LINE CR1 280 447 -1130 352 255 150 13 chr10 4452616 4452769 -141136519 - L2 LINE L2 -12 3301 3128 476 266 94 47 chr10 4453521 4453818 -141135470 - MLT1J LTR MaLR -7 504 194 589 273 78 7 chr10 4455237 4455545 -141133743 - L1MB7 LINE L1 -2951 3195 2866 5420 80 11 23 chr10 4455550 4456335 -141132953 + L1PA8A LINE L1 5355 6130 -1 239 300 6 38 chr10 4456344 4456504 -141132784 - L1MB7 LINE L1 -3273 2873 2719 28 61 0 0 chr10 4456591 4456640 -141132648 + AT_rich Low_complexity Low_complexity 1 49 0 354 123 0 0 chr10 4457291 4457348 -141131940 + (CA)n Simple_repeat Simple_repeat 2 58 0 203 248 9 0 chr10 4457380 4457485 -141131803 + (TA)n Simple_repeat Simple_repeat 1 106 0 243 0 0 0 chr10 4457486 4457513 -141131775 + (CA)n Simple_repeat Simple_repeat 2 28 0 2126 125 3 0 chr10 4458354 4458650 -141130638 + AluSp SINE Alu 1 297 -16 486 47 94 0 chr10 4458650 4458778 -141130510 + (TA)n Simple_repeat Simple_repeat 1 140 0 444 313 98 9 chr10 4459524 4459748 -141129540 + MIR SINE MIR 18 261 -1 216 0 0 0 chr10 4460048 4460072 -141129216 + (A)n Simple_repeat Simple_repeat 1 24 0 270 0 0 0 chr10 4462590 4462620 -141126668 + (CA)n Simple_repeat Simple_repeat 2 31 0 3447 158 39 2 chr10 4463404 4464016 -141125272 - MER41B LTR ERV1 0 635 1 224 329 61 0 chr10 4464050 4464132 -141125156 + L2 LINE L2 3209 3295 -18 1565 189 0 0 chr10 4464269 4464534 -141124754 + MLT1A1 LTR MaLR 101 365 0 306 0 0 0 chr10 4464850 4464884 -141124404 + (CA)n Simple_repeat Simple_repeat 1 34 0 398 94 16 0 chr10 4465086 4465150 -141124138 + (TTCC)n Simple_repeat Simple_repeat 3 67 0 3407 154 48 9 chr10 4467655 4468286 -141121002 - L1PA15 LINE L1 -7 6158 5504 2197 112 3 0 chr10 4468743 4469047 -141120241 - AluSx SINE Alu -7 305 1 261 318 91 0 chr10 4469269 4469379 -141119909 + L2 LINE L2 2939 3058 -214 207 224 0 86 chr10 4469935 4470051 -141119237 + A-rich Low_complexity Low_complexity 2 107 0 208 153 25 76 chr10 4470503 4470660 -141118628 + (TA)n Simple_repeat Simple_repeat 1 149 0 255 323 42 37 chr10 4471600 4471789 -141117499 - L2 LINE L2 0 3313 3124 794 235 46 28 chr10 4471815 4472032 -141117256 - MER58A DNA MER1_type -2 222 2 492 359 38 23 chr10 4472076 4472338 -141116950 - L2 LINE L2 -244 3069 2804 264 275 44 0 chr10 4472751 4472842 -141116446 - L1MEc LINE L1 -3730 2485 2391 4995 165 32 5 chr10 4472855 4473872 -141115416 - L1PA16 LINE L1 -9 6157 5116 592 260 34 15 chr10 4473906 4474171 -141115117 - L1MEc LINE L1 -3992 2404 2135 403 263 60 18 chr10 4474331 4474548 -141114740 - L1MEc LINE L1 -5320 1076 851 1087 140 5 37 chr10 4525443 4525657 -141063631 + AluSp SINE Alu 1 207 -106 21 0 0 0 chr10 4525765 4525786 -141063502 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr10 4526701 4526727 -141062561 + AT_rich Low_complexity Low_complexity 1 26 0 1444 153 0 47 chr10 4527175 4527486 -141061802 + AluJb SINE Alu 22 319 0 687 39 39 0 chr10 4527596 4527698 -141061590 + (TAGA)n Simple_repeat Simple_repeat 4 109 0 429 261 72 83 chr10 4527707 4527931 -141061357 + L1MEc LINE L1 1925 2150 -4246 919 293 35 60 chr10 4527931 4528331 -141060957 - MLT1B LTR MaLR 0 390 1 429 261 72 83 chr10 4528331 4528565 -141060723 + L1MEc LINE L1 2150 2378 -4018 707 181 8 8 chr10 4528688 4528815 -141060473 - AluSq/x SINE Alu -184 129 3 1487 125 23 0 chr10 4528908 4529124 -141060164 + L1PA13 LINE L1 5939 6159 -4 21 0 0 0 chr10 4530760 4530781 -141058507 + AT_rich Low_complexity Low_complexity 1 21 0 396 0 0 0 chr10 4530817 4530861 -141058427 + (TAGA)n Simple_repeat Simple_repeat 1 44 0 210 313 56 49 chr10 4534527 4534671 -141054617 - MIR SINE MIR -21 241 97 257 256 13 13 chr10 4534824 4534902 -141054386 + MIR SINE MIR 184 261 -1 372 240 16 33 chr10 4535440 4535561 -141053727 - L1MC4a LINE L1 -1875 5933 5815 216 234 0 0 chr10 4535593 4535640 -141053648 - L2 LINE L2 -4 3309 3263 503 203 105 28 chr10 4535959 4536102 -141053186 + MER50 LTR ERV1 10 163 -571 1176 127 35 119 chr10 4536802 4537172 -141052116 + THE1C LTR MaLR 37 375 0 3578 156 9 9 chr10 4538393 4539222 -141050066 + L1PA13 LINE L1 5053 5882 -281 233 296 12 12 chr10 4540198 4540279 -141049009 + CT-rich Low_complexity Low_complexity 1 81 0 414 0 0 0 chr10 4540281 4540327 -141048961 + (CA)n Simple_repeat Simple_repeat 2 47 0 242 353 69 40 chr10 4540639 4540812 -141048476 - L2 LINE L2 -1408 1906 1729 207 100 0 0 chr10 4541790 4541820 -141047468 + (TG)n Simple_repeat Simple_repeat 2 31 0 638 138 88 6 chr10 4541936 4542096 -141047192 + L1MCa LINE L1 2280 2452 -3974 * 2747 166 27 27 chr10 4542093 4542621 -141046667 + L1MC1 LINE L1 5787 6317 -16 2445 55 0 21 chr10 4542621 4542936 -141046352 + L1PA8 LINE L1 5851 6169 -3 2747 166 27 27 chr10 4542936 4542954 -141046334 + L1MC1 LINE L1 6316 6333 0 36 23 0 0 chr10 4543219 4543262 -141046026 + AT_rich Low_complexity Low_complexity 1 43 0 2247 115 0 0 chr10 4543738 4544034 -141045254 - AluSq SINE Alu -17 296 1 1780 109 15 40 chr10 4544750 4545047 -141044241 + AluSq SINE Alu 47 336 0 2197 225 79 63 chr10 4545338 4546173 -141043115 - L1ME2 LINE L1 -34 6130 5283 2111 81 14 3 chr10 4546252 4546548 -141042740 - L1PA8 LINE L1 -5 6167 5869 1738 65 4 0 chr10 4546548 4546777 -141042511 + L1PA8 LINE L1 5648 5877 -295 210 80 60 20 chr10 4546795 4546845 -141042443 + (TA)n Simple_repeat Simple_repeat 1 52 0 600 276 123 78 chr10 4546855 4548814 -141040474 - L1ME LINE L1 -3550 2832 796 1347 247 7 3 chr10 4548887 4549170 -141040118 - AluJo SINE Alu -22 290 7 328 348 70 43 chr10 4549947 4550177 -141039111 - MIR SINE MIR -3 259 24 25 0 0 0 chr10 4551291 4551316 -141037972 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr10 4551703 4551732 -141037556 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr10 4552894 4552918 -141036370 + AT_rich Low_complexity Low_complexity 1 24 0 962 216 96 45 chr10 4553280 4553308 -141035980 + Charlie2 DNA MER1_type 2307 2332 -530 2219 119 12 3 chr10 4553308 4553651 -141035637 + L1PB1 LINE L1 5806 6151 0 962 216 96 45 chr10 4553651 4554070 -141035218 + Charlie2 DNA MER1_type 2332 2777 -85 1013 220 110 38 chr10 4554501 4554928 -141034360 - MLT1C LTR MaLR -4 463 6 406 242 37 58 chr10 4555992 4556182 -141033106 + Charlie2 DNA MER1_type 2596 2781 -81 655 176 25 17 chr10 4557067 4557186 -141032102 + FLAM_C SINE Alu 2 121 -12 1061 159 0 17 chr10 4557278 4557454 -141031834 + FRAM SINE Alu 4 176 0 406 318 38 30 chr10 4558905 4559141 -141030147 + MIR SINE MIR 24 261 -1 1728 156 0 73 chr10 4559591 4559905 -141029383 + AluJb SINE Alu 1 291 -21 395 16 62 0 chr10 4559905 4559969 -141029319 + (TA)n Simple_repeat Simple_repeat 2 69 0 317 277 39 0 chr10 4559983 4560113 -141029175 + L1ME4a LINE L1 5751 5885 -236 267 224 20 20 chr10 4560142 4560289 -141028999 + GA-rich Low_complexity Low_complexity 2 148 0 1853 93 0 19 chr10 4562253 4562522 -141026766 - L1PA8 LINE L1 -2 6170 5907 243 0 0 0 chr10 4562638 4562665 -141026623 + (CA)n Simple_repeat Simple_repeat 1 27 0 2233 86 0 20 chr10 4562829 4563131 -141026157 + AluY SINE Alu 1 296 -15 712 181 12 0 chr10 4563721 4563892 -141025396 + GA-rich Low_complexity Low_complexity 4 176 0 261 0 0 0 chr10 4563970 4563999 -141025289 + (TG)n Simple_repeat Simple_repeat 1 29 0 1986 110 0 7 chr10 4564197 4564534 -141024754 - AluSc SINE Alu 0 335 1 284 291 101 34 chr10 4564896 4565075 -141024213 - LTR33 LTR ERVL -78 443 253 294 299 162 25 chr10 4565083 4565367 -141023921 - ERVL LTR ERVL -865 4899 4577 402 254 134 69 chr10 4565475 4565707 -141023581 - MLT1H LTR MaLR -197 352 106 377 264 110 61 chr10 4565763 4566117 -141023171 - L1M4 LINE L1 -2486 3660 3280 2124 122 3 0 chr10 4566117 4566411 -141022877 - AluSx SINE Alu -17 295 1 377 264 110 61 chr10 4566411 4566484 -141022804 - L1M4 LINE L1 -2866 3280 3212 594 313 37 49 chr10 4566636 4566962 -141022326 + L3 LINE CR1 1139 1460 -117 4330 233 57 27 chr10 4566985 4568346 -141020942 + Charlie1a DNA MER1_type 39 1439 -16 201 337 22 11 chr10 4569427 4569519 -141019769 - L2 LINE L2 -1 3271 3179 369 189 82 61 chr10 4570352 4570548 -141018740 + Charlie1 DNA MER1_type 2471 2670 -91 * 773 192 87 9 chr10 4570542 4570771 -141018517 + Charlie5 DNA MER1_type 2330 2576 -36 2639 179 12 0 chr10 4570873 4571364 -141017924 + LOR1a LTR ERV1 1 497 0 22 88 0 0 chr10 4571896 4571953 -141017335 + AT_rich Low_complexity Low_complexity 1 57 0 37 39 0 0 chr10 4572111 4572162 -141017126 + AT_rich Low_complexity Low_complexity 1 51 0 484 291 91 25 chr10 4574601 4574918 -141014370 + L1ME LINE L1 5317 5661 -460 183 114 0 0 chr10 4576133 4576168 -141013120 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 2555 162 36 0 chr10 4577312 4577757 -141011531 + LOR1b LTR ERV1 1 461 0 311 316 0 38 chr10 4579611 4579690 -141009598 - MIR SINE MIR -178 84 9 2291 144 58 16 chr10 4582510 4582940 -141006348 + L1PB3 LINE L1 5707 6154 0 44 20 0 0 chr10 4584048 4584099 -141005189 + AT_rich Low_complexity Low_complexity 1 51 0 367 189 38 13 chr10 4584560 4584719 -141004569 + (TA)n Simple_repeat Simple_repeat 1 163 0 1249 220 55 52 chr10 4584729 4585092 -141004196 - MLT2D LTR ERVL -40 374 11 827 210 66 0 chr10 4586015 4586196 -141003092 - LTR26 LTR ERV1 0 603 411 917 293 52 12 chr10 4586418 4586746 -141002542 - MER45C DNA AcHobo -611 342 2 180 351 108 0 chr10 4588169 4588243 -141001045 + MIR SINE MIR 64 145 -63 1793 180 91 29 chr10 4589309 4589726 -140999562 - MSTB2 LTR MaLR 0 457 15 1547 93 23 0 chr10 4593003 4593219 -140996069 - L1PA13 LINE L1 -4 6159 5939 2174 128 0 6 chr10 4593310 4593622 -140995666 + AluSx SINE Alu 1 310 -2 207 191 0 0 chr10 4593628 4593675 -140995613 + A-rich Low_complexity Low_complexity 1 47 0 374 238 115 46 chr10 4593793 4594054 -140995234 - L1MC5 LINE L1 -51 7910 7632 1248 79 0 0 chr10 4594056 4594208 -140995080 + AluSp/q SINE Alu 154 305 -8 2375 101 3 0 chr10 4595343 4595651 -140993637 + AluSp SINE Alu 1 309 -4 22 35 0 0 chr10 4596251 4596280 -140993008 + AT_rich Low_complexity Low_complexity 1 29 0 943 234 49 19 chr10 4596289 4596663 -140992625 - L1ME1 LINE L1 -19 6643 6238 641 269 92 8 chr10 4596659 4596897 -140992391 - L1ME1 LINE L1 -1221 5423 5166 * 1326 271 42 17 chr10 4596880 4597475 -140991813 - L1ME1 LINE L1 -2890 3754 3145 3000 258 45 45 chr10 4597485 4598542 -140990746 - L1ME1 LINE L1 -5458 1084 29 794 243 42 58 chr10 4598556 4598934 -140990354 - L1M4 LINE L1 -1377 4769 4398 26 0 0 0 chr10 4598940 4598966 -140990322 + AT_rich Low_complexity Low_complexity 1 26 0 669 165 177 0 chr10 4598967 4599125 -140990163 - L1MA8 LINE L1 -3 6288 6103 * 3347 160 29 7 chr10 4599123 4600178 -140989110 - L1MA8 LINE L1 -429 5883 4813 500 245 76 81 chr10 4600168 4600402 -140988886 - L1MDa LINE L1 -3890 2650 2417 * 1004 283 32 58 chr10 4600402 4600802 -140988486 + MLT1B LTR MaLR 1 390 0 500 245 76 81 chr10 4600802 4601035 -140988253 - L1MDa LINE L1 -4123 2417 2185 687 39 39 0 chr10 4601035 4601137 -140988151 + (TCTA)n Simple_repeat Simple_repeat 4 109 0 500 245 76 81 chr10 4601137 4601247 -140988041 - L1MDa LINE L1 -4355 2185 2076 1681 147 0 41 chr10 4601247 4601576 -140987712 - AluJb SINE Alu 0 319 3 500 245 76 81 chr10 4601576 4601727 -140987561 - L1MDa LINE L1 -4464 2076 1929 222 91 0 0 chr10 4602152 4602185 -140987103 + (TATG)n Simple_repeat Simple_repeat 3 35 0 23 0 0 0 chr10 4602386 4602409 -140986879 + AT_rich Low_complexity Low_complexity 1 23 0 381 205 0 12 chr10 4603855 4603938 -140985350 + HERVL LTR ERVL 4521 4602 -1052 1891 179 61 47 chr10 4603939 4604363 -140984925 - MSTB1 LTR MaLR 0 432 3 896 265 105 41 chr10 4604372 4604672 -140984616 + HERVL LTR ERVL 4643 4971 -793 975 244 55 88 chr10 4604672 4605057 -140984231 - MLT1A2 LTR MaLR -2 372 1 896 265 105 41 chr10 4605057 4605118 -140984170 + HERVL LTR ERVL 4971 5027 -737 2054 135 0 0 chr10 4605547 4605829 -140983459 + AluSc SINE Alu 1 282 -27 198 0 0 0 chr10 4605829 4605851 -140983437 + (TA)n Simple_repeat Simple_repeat 2 23 0 36 40 0 0 chr10 4605909 4605959 -140983329 + AT_rich Low_complexity Low_complexity 1 50 0 1006 250 14 0 chr10 4606234 4606446 -140982842 + MER58A DNA MER1_type 2 216 -8 286 132 15 29 chr10 4606606 4606674 -140982614 + CT-rich Low_complexity Low_complexity 4 70 0 598 234 140 27 chr10 4606797 4607054 -140982234 - L1M4 LINE L1 -3428 2718 2433 346 281 22 15 chr10 4607465 4607600 -140981688 + MIR SINE MIR 65 200 -62 1849 155 13 26 chr10 4607980 4608289 -140980999 - AluSx SINE Alu -6 306 2 24 0 0 0 chr10 4608410 4608434 -140980854 + AT_rich Low_complexity Low_complexity 1 24 0 2128 120 3 0 chr10 4608815 4609115 -140980173 + AluSx SINE Alu 1 301 -11 215 281 53 0 chr10 4609254 4609311 -140979977 + MIR SINE MIR 25 84 -178 2478 86 0 9 chr10 4609738 4610053 -140979235 + AluSq SINE Alu 2 313 0 272 222 9 0 chr10 4610862 4610970 -140978318 + (TG)n Simple_repeat Simple_repeat 1 109 0 396 271 0 0 chr10 4611005 4611175 -140978113 + (TG)n Simple_repeat Simple_repeat 2 171 0 1887 132 184 8 chr10 4611230 4611594 -140977694 - MSTA LTR MaLR 0 428 1 2270 89 0 0 chr10 4611772 4612076 -140977212 + AluY SINE Alu 1 304 0 200 303 26 0 chr10 4613449 4613525 -140975763 + MIR SINE MIR 184 261 -1 2317 107 0 0 chr10 4614652 4614943 -140974345 - AluSg SINE Alu -19 291 1 4008 210 35 79 chr10 4617072 4617185 -140972103 + L1MC/D LINE L1 4054 4170 -2028 2351 105 0 0 chr10 4617185 4617489 -140971799 + AluSg SINE Alu 1 304 -6 4008 210 35 79 chr10 4617489 4618486 -140970802 + L1MC/D LINE L1 4170 5073 -1125 1338 115 5 0 chr10 4618486 4618686 -140970602 - L1PB2 LINE L1 -2 6149 5949 4008 210 35 79 chr10 4618686 4619053 -140970235 + L1MC/D LINE L1 5073 5455 -743 208 283 75 17 chr10 4619284 4619404 -140969884 + L2 LINE L2 3146 3272 0 37 0 0 0 chr10 4620617 4620654 -140968634 + GC_rich Low_complexity Low_complexity 1 37 0 182 296 91 0 chr10 4621128 4621216 -140968072 - L2 LINE L2 -914 2400 2305 278 316 0 13 chr10 4621318 4621394 -140967894 + MER119 DNA MER1_type 2 76 -507 1165 172 39 19 chr10 4621397 4621653 -140967635 + L1ME3A LINE L1 5357 5617 -561 758 227 35 10 chr10 4622376 4622574 -140966714 - L1MA6 LINE L1 -155 6145 5943 258 207 2 32 chr10 4622780 4622843 -140966445 - MIR SINE MIR -87 121 59 214 330 35 26 chr10 4623253 4623368 -140965920 - MIR SINE MIR -56 152 37 991 134 0 0 chr10 4623924 4624066 -140965222 + AluSg/x SINE Alu 166 307 -5 2334 105 0 0 chr10 4625297 4625591 -140963697 + AluSg SINE Alu 1 294 -16 4627 134 89 66 chr10 4626658 4628100 -140961188 + pTR5 LTR ERV1 66 2438 0 194 297 195 0 chr10 4628786 4628904 -140960384 - MIR SINE MIR -17 245 105 254 314 57 0 chr10 4629231 4629336 -140959952 + MLT1J1 LTR MaLR 1 111 -335 402 261 137 12 chr10 4629346 4629507 -140959781 + MLT1J2 LTR MaLR 156 336 -114 233 222 269 19 chr10 4630447 4630555 -140958733 - L1ME4a LINE L1 0 6121 5987 182 328 0 0 chr10 4630889 4630947 -140958341 - L2 LINE L2 0 3272 3215 395 332 156 17 chr10 4631196 4631548 -140957740 - L2 LINE L2 -42 3230 2830 209 321 138 0 chr10 4631809 4631918 -140957370 - L2 LINE L2 -793 2521 2398 648 294 66 45 chr10 4632641 4632930 -140956358 + L2 LINE L2 3019 3313 0 394 264 40 34 chr10 4633444 4633592 -140955696 + L1ME3A LINE L1 5995 6143 -27 655 233 87 36 chr10 4633646 4633865 -140955423 + L1ME3A LINE L1 5707 5936 -234 343 231 154 15 chr10 4633909 4634039 -140955249 + L1ME3A LINE L1 6020 6167 -3 28 0 0 0 chr10 4636046 4636074 -140953214 + AT_rich Low_complexity Low_complexity 1 28 0 221 0 35 0 chr10 4636491 4636520 -140952768 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 226 240 144 89 chr10 4636525 4636671 -140952617 + MIR3 SINE MIR 39 192 -16 523 288 0 0 chr10 4637478 4637610 -140951678 + MIR SINE MIR 103 234 -28 228 258 148 13 chr10 4638445 4638600 -140950688 - MIR3 SINE MIR -16 192 17 234 105 0 0 chr10 4639375 4639413 -140949875 + (TAAAG)n Simple_repeat Simple_repeat 2 39 0 244 309 74 19 chr10 4639868 4640027 -140949261 - MIR3 SINE MIR -25 183 8 2520 121 3 3 chr10 4640454 4640818 -140948470 + THE1B LTR MaLR 1 364 0 344 247 37 0 chr10 4640887 4640968 -140948320 - MER5A DNA MER1_type -68 121 38 225 268 71 0 chr10 4640993 4641049 -140948239 + L2 LINE L2 3162 3221 -51 230 277 84 12 chr10 4642069 4642152 -140947136 - MIR SINE MIR -70 192 104 456 287 124 40 chr10 4642185 4643601 -140945687 + L1M4 LINE L1 3095 4677 -1469 261 216 0 0 chr10 4643611 4643662 -140945626 + L1ME2 LINE L1 6072 6122 -42 190 373 56 32 chr10 4644294 4644420 -140944868 - L2 LINE L2 -5 3267 3139 1089 184 20 110 chr10 4644587 4644949 -140944339 + L1MA7 LINE L1 5937 6277 -14 1871 144 7 0 chr10 4645038 4645344 -140943944 - AluJo SINE Alu -4 308 1 274 238 16 16 chr10 4645923 4645986 -140943302 - L2 LINE L2 -9 3263 3201 1937 132 0 0 chr10 4646000 4646273 -140943015 + AluSx SINE Alu 39 311 -1 1178 260 122 10 chr10 4646868 4647273 -140942015 + L1MC/D LINE L1 3742 4213 -1933 282 29 0 0 chr10 4647273 4647308 -140941980 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 1178 260 122 10 chr10 4647308 4647395 -140941893 + L1MC/D LINE L1 4213 4289 -1857 2411 86 0 0 chr10 4647422 4647723 -140941565 + AluSc SINE Alu 3 303 -6 1397 193 45 0 chr10 4647726 4647990 -140941298 + AluJo SINE Alu 1 276 -36 288 0 0 0 chr10 4648000 4648032 -140941256 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 2796 239 51 22 chr10 4648032 4648739 -140940549 + L1MC/D LINE L1 4321 5071 -1249 5223 82 1 0 chr10 4648739 4649432 -140939856 - L1PA8A LINE L1 -12 6119 5426 2796 239 51 22 chr10 4649432 4649952 -140939336 + L1MC/D LINE L1 5071 5575 -745 321 89 0 0 chr10 4652966 4653011 -140936277 + (CA)n Simple_repeat Simple_repeat 2 46 0 23 0 0 0 chr10 4653180 4653203 -140936085 + AT_rich Low_complexity Low_complexity 1 23 0 1321 262 104 33 chr10 4653793 4654426 -140934862 - MER20B DNA MER1_type -59 724 47 333 320 31 73 chr10 4654536 4654989 -140934299 + L2 LINE L2 1983 2416 -898 250 286 112 51 chr10 4655431 4655609 -140933679 + MLT1J LTR MaLR 1 189 -322 585 211 0 0 chr10 4655609 4655742 -140933546 + (TG)n Simple_repeat Simple_repeat 1 133 0 845 246 67 56 chr10 4655874 4656245 -140933043 + Charlie4a DNA MER1_type 43 421 -1540 1552 154 75 27 chr10 4656245 4656537 -140932751 - AluJo SINE Alu -6 306 1 845 246 67 56 chr10 4656537 4656595 -140932693 + Charlie4a DNA MER1_type 421 477 -31 702 251 6 6 chr10 4656788 4656951 -140932337 + MLT1C LTR MaLR 305 467 0 2203 238 45 52 chr10 4656955 4657781 -140931507 + MLT1C-int LTR MaLR 5 884 -487 1019 226 37 140 chr10 4657907 4658452 -140930836 + MLT1C-int LTR MaLR 944 1370 -1 411 185 70 135 chr10 4658459 4658659 -140930629 + MLT1C LTR MaLR 7 193 -197 342 259 68 68 chr10 4658798 4658941 -140930347 + MLT1K LTR MaLR 328 473 -115 13979 82 11 1 chr10 4658941 4661636 -140927652 + L1PA7 LINE L1 3440 6154 0 342 259 68 68 chr10 4661636 4661712 -140927576 + MLT1K LTR MaLR 472 547 -41 194 336 40 24 chr10 4661895 4662020 -140927268 - MIR3 SINE MIR -43 165 39 922 9 0 0 chr10 4662275 4662380 -140926908 + L1PA3 LINE L1 6050 6154 -1 207 204 0 0 chr10 4662394 4662438 -140926850 + A-rich Low_complexity Low_complexity 1 44 0 423 273 239 14 chr10 4662465 4662754 -140926534 - L2 LINE L2 0 3272 2919 2570 47 0 22 chr10 4663478 4663796 -140925492 + AluY SINE Alu 1 311 0 2839 206 8 2 chr10 4663940 4664468 -140924820 + MER41D LTR ERV1 1 531 -26 26 0 0 0 chr10 4664511 4664537 -140924751 + AT_rich Low_complexity Low_complexity 1 26 0 238 152 0 0 chr10 4664870 4664916 -140924372 - L1ME3 LINE L1 -7 6155 6110 2812 256 131 26 chr10 4664985 4667180 -140922108 - L1ME3 LINE L1 -197 5967 3497 315 171 103 51 chr10 4667299 4667416 -140921872 - L1ME3 LINE L1 -2863 3283 3161 522 271 29 25 chr10 4667419 4667659 -140921629 - L1ME3 LINE L1 -3090 3056 2816 258 244 24 0 chr10 4667721 4667803 -140921485 - L1ME3 LINE L1 -3227 2919 2836 2097 117 10 13 chr10 4667958 4668265 -140921023 - AluSx SINE Alu -2 310 5 21 0 0 0 chr10 4670677 4670698 -140918590 + AT_rich Low_complexity Low_complexity 1 21 0 526 255 93 32 chr10 4671214 4671461 -140917827 - MIR SINE MIR 0 262 1 196 394 0 14 chr10 4673879 4673950 -140915338 - L2 LINE L2 -86 3186 3117 341 228 196 19 chr10 4675567 4675725 -140913563 - MER5A DNA MER1_type 0 189 4 2284 210 33 48 chr10 4676937 4677569 -140911719 - L1MC3 LINE L1 -2 7783 7161 265 67 0 3 chr10 4677570 4677805 -140911483 + AluY SINE Alu 1 313 0 6691 236 74 41 chr10 4677806 4679637 -140909651 - L1MC3 LINE L1 -617 7168 5398 1976 131 40 0 chr10 4679637 4679811 -140909477 - AluSx SINE Alu -3 309 117 270 0 0 0 chr10 4679811 4679841 -140909447 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1976 131 40 0 chr10 4679841 4679963 -140909325 - AluSx SINE Alu -195 117 1 6691 236 74 41 chr10 4679963 4680315 -140908973 - L1MC3 LINE L1 -2387 5398 5059 1236 138 20 5 chr10 4680315 4680518 -140908770 - L1PB1 LINE L1 -1 6150 5945 6691 236 74 41 chr10 4680518 4681823 -140907465 - L1MC3 LINE L1 -2726 5059 3564 964 232 34 0 chr10 4681930 4682193 -140907095 + L1MA4 LINE L1 6025 6296 -4 347 235 145 70 chr10 4682350 4682550 -140906738 - HAL1 LINE L1 -2288 219 5 269 239 128 60 chr10 4683508 4683625 -140905663 + MER69 DNA AcHobo 1 125 -2401 25 0 0 0 chr10 4685216 4685241 -140904047 + AT_rich Low_complexity Low_complexity 1 25 0 205 202 0 146 chr10 4687829 4687918 -140901370 - L2 LINE L2 -514 2800 2725 23 33 0 0 chr10 4688136 4688166 -140901122 + AT_rich Low_complexity Low_complexity 1 30 0 288 294 15 0 chr10 4688176 4688244 -140901044 - MIR3 SINE MIR -24 184 116 248 151 0 19 chr10 4688583 4688636 -140900652 + GA-rich Low_complexity Low_complexity 1 52 0 39 38 0 0 chr10 4689249 4689302 -140899986 + AT_rich Low_complexity Low_complexity 1 53 0 238 210 110 60 chr10 4690233 4690333 -140898955 + MIR3 SINE MIR 83 187 -21 674 239 54 84 chr10 4690409 4690744 -140898544 - MER46C DNA MER2_type -13 325 1 1716 189 20 3 chr10 4691156 4691506 -140897782 - MER89 LTR ERV1 -4 555 200 766 192 26 6 chr10 4691529 4691685 -140897603 - FRAM SINE Alu -17 159 1 1253 278 91 25 chr10 4692804 4693289 -140895999 - LTR40a LTR ERVL 0 519 3 278 231 0 0 chr10 4693294 4693346 -140895942 - HERVL40 LTR ERVL -35 5495 5444 276 291 110 8 chr10 4693499 4693626 -140895662 + MER58B DNA MER1_type 199 338 -3 349 102 169 0 chr10 4694146 4694205 -140895083 - MER85 DNA T2_type -66 73 5 493 291 89 11 chr10 4694207 4694386 -140894902 + HERVL40 LTR ERVL 1219 1411 -4119 420 20 0 0 chr10 4694562 4694611 -140894677 + MER85 DNA T2_type 89 137 -2 1902 138 22 38 chr10 4695837 4696159 -140893129 - L1MB3 LINE L1 -4 6179 5862 2104 109 3 0 chr10 4696159 4696452 -140892836 + AluSx SINE Alu 1 294 -18 1902 138 22 38 chr10 4696452 4696498 -140892790 - L1MB3 LINE L1 -321 5862 5817 263 48 0 48 chr10 4697737 4697779 -140891509 + (TTCC)n Simple_repeat Simple_repeat 1 40 0 204 150 33 33 chr10 4697791 4697851 -140891437 + CT-rich Low_complexity Low_complexity 4 63 0 184 30 61 0 chr10 4698076 4698109 -140891179 + T-rich Low_complexity Low_complexity 1 35 0 265 196 20 0 chr10 4698329 4698380 -140890908 - MLT1G1 LTR MaLR 0 595 544 22 35 0 0 chr10 4698648 4698677 -140890611 + AT_rich Low_complexity Low_complexity 1 29 0 21 71 0 0 chr10 4698703 4698745 -140890543 + AT_rich Low_complexity Low_complexity 1 42 0 255 257 0 0 chr10 4698772 4698873 -140890415 + (TG)n Simple_repeat Simple_repeat 1 101 0 253 340 9 28 chr10 4700496 4700602 -140888686 - MIR3 SINE MIR -10 198 95 2032 205 66 5 chr10 4700848 4701257 -140888031 - MER70A LTR ERVL 0 472 39 303 93 0 0 chr10 4701268 4701311 -140887977 + (TG)n Simple_repeat Simple_repeat 2 44 0 206 312 80 24 chr10 4703328 4703453 -140885835 - L2 LINE L2 -2 3311 3180 802 303 33 63 chr10 4704146 4704575 -140884713 + L2 LINE L2 2898 3313 0 211 333 0 0 chr10 4705297 4705360 -140883928 - L2 LINE L2 0 3272 3210 1738 188 7 0 chr10 4705944 4706253 -140883035 + AluJb SINE Alu 2 312 0 36 0 0 0 chr10 4708236 4708272 -140881016 + AT_rich Low_complexity Low_complexity 1 36 0 2541 44 0 0 chr10 4708840 4709136 -140880152 + AluY SINE Alu 2 297 -14 302 301 0 49 chr10 4709387 4709510 -140879778 - MIR SINE MIR -70 192 76 2377 126 30 13 chr10 4710188 4710584 -140878704 - MER57A LTR ERV1 0 403 1 214 273 13 39 chr10 4711711 4711788 -140877500 + MIR SINE MIR 66 140 -68 356 319 76 38 chr10 4712643 4712960 -140876328 - L1M4 LINE L1 -1627 4519 4191 1034 244 78 36 chr10 4712972 4713394 -140875894 - MLT1C LTR MaLR 0 467 17 881 164 56 119 chr10 4713424 4713693 -140875595 - MLT1C-int LTR MaLR -1 1370 1119 1375 294 83 45 chr10 4713696 4714303 -140874985 - L1ME LINE L1 -4600 1480 898 2128 133 3 0 chr10 4714303 4714611 -140874677 - AluSx SINE Alu -3 309 1 1375 294 83 45 chr10 4714611 4715427 -140873861 - L1ME LINE L1 -5182 898 6 34 42 0 0 chr10 4716258 4716306 -140872982 + AT_rich Low_complexity Low_complexity 1 48 0 390 245 109 43 chr10 4716927 4717111 -140872177 + MIR SINE MIR 53 248 -14 21 0 0 0 chr10 4717155 4717176 -140872112 + AT_rich Low_complexity Low_complexity 1 21 0 1883 242 7 4 chr10 4717710 4718629 -140870659 + L1MB7 LINE L1 5 1061 -5481 1671 249 54 7 chr10 4718663 4719104 -140870184 + MLT1C LTR MaLR 6 467 0 2835 251 95 41 chr10 4719109 4719864 -140869424 + L1MB7 LINE L1 1201 1913 -4731 1657 189 0 11 chr10 4719864 4720149 -140869139 + AluJb SINE Alu 1 282 -30 2835 251 95 41 chr10 4720149 4721811 -140867477 + L1MB7 LINE L1 1913 3749 -2895 1277 226 22 38 chr10 4721821 4722139 -140867149 + MLT1A1 LTR MaLR 11 323 -42 5464 225 69 39 chr10 4722159 4724980 -140864308 + L1MB7 LINE L1 3754 6659 -23 1276 168 5 23 chr10 4724993 4725213 -140864075 + AluSx SINE Alu 1 216 -96 945 140 0 0 chr10 4725213 4725363 -140863925 + AluSg/x SINE Alu 154 303 -9 209 368 58 32 chr10 4725664 4725819 -140863469 - MIR SINE MIR -39 223 65 1511 174 102 7 chr10 4727020 4727325 -140861963 + MER1B DNA MER1_type 3 336 -1 1970 140 0 0 chr10 4728702 4728988 -140860300 - AluSx SINE Alu -23 289 4 323 308 8 15 chr10 4729265 4729395 -140859893 + GA-rich Low_complexity Low_complexity 2 130 0 2146 122 10 0 chr10 4730413 4730709 -140858579 + AluSc SINE Alu 1 299 -10 6238 158 54 6 chr10 4731417 4732591 -140856697 + Tigger3b DNA MER2_type 1 1230 -1 271 219 16 65 chr10 4732626 4732749 -140856539 + (CATATA)n Simple_repeat Simple_repeat 2 118 0 349 236 0 50 chr10 4733293 4733475 -140855813 - L1ME4a LINE L1 -11 6110 5938 27 49 0 0 chr10 4733508 4733549 -140855739 + AT_rich Low_complexity Low_complexity 1 41 0 1106 228 114 17 chr10 4734165 4734525 -140854763 + MSTD LTR MaLR 1 395 -1 286 228 134 20 chr10 4735241 4735390 -140853898 + L1 LINE L1 4899 5064 -1082 21 0 0 0 chr10 4735712 4735733 -140853555 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr10 4736648 4736674 -140852614 + AT_rich Low_complexity Low_complexity 1 26 0 34 79 0 0 chr10 4737096 4737172 -140852116 + AT_rich Low_complexity Low_complexity 1 76 0 201 286 0 0 chr10 4739704 4739753 -140849535 + L2 LINE L2 3139 3187 -85 585 255 104 24 chr10 4741306 4741557 -140847731 + MLT1F1 LTR MaLR 2 272 -295 2066 103 7 35 chr10 4741822 4742132 -140847156 - AluSx SINE Alu 0 312 12 1097 291 161 78 chr10 4744142 4745250 -140844038 - L2 LINE L2 -27 3286 2271 3578 130 30 17 chr10 4745250 4745852 -140843436 - MER4B LTR ERV1 0 610 1 1097 291 161 78 chr10 4745852 4746890 -140842398 - L2 LINE L2 -1042 2271 969 1709 248 108 24 chr10 4746901 4747478 -140841810 + MLT1E2 LTR MaLR 1 625 -1 219 360 23 23 chr10 4747519 4747691 -140841597 - L2 LINE L2 -2424 890 719 182 333 0 0 chr10 4748908 4748956 -140840332 + L2 LINE L2 3207 3254 -18 333 259 36 9 chr10 4750986 4751098 -140838190 - MIR3 SINE MIR -5 203 89 244 234 75 56 chr10 4751529 4751636 -140837652 + HAL1 LINE L1 1914 2022 -485 1824 291 128 39 chr10 4751716 4752924 -140836364 - L2 LINE L2 -365 2949 1635 306 290 155 27 chr10 4753315 4753650 -140835638 + HAL1 LINE L1 2066 2443 -64 207 167 0 0 chr10 4754376 4754418 -140834870 + T-rich Low_complexity Low_complexity 1 42 0 180 0 0 0 chr10 4754738 4754758 -140834530 + (T)n Simple_repeat Simple_repeat 1 20 0 246 190 13 25 chr10 4755082 4755161 -140834127 + (TA)n Simple_repeat Simple_repeat 2 79 0 1043 166 6 0 chr10 4755750 4755925 -140833363 - L1PB3 LINE L1 -11 6143 5968 181 354 10 21 chr10 4756416 4756512 -140832776 + L2 LINE L2 3141 3235 -37 2026 167 12 19 chr10 4756548 4757062 -140832226 + MER39B LTR ERV1 1 603 -50 950 156 182 36 chr10 4757062 4757354 -140831934 - MER61C LTR ERV1 0 434 1 400 315 105 55 chr10 4757456 4758041 -140831247 - L1 LINE L1 -1980 4370 3751 29 28 0 0 chr10 4759974 4760010 -140829278 + AT_rich Low_complexity Low_complexity 1 36 0 1311 102 0 0 chr10 4760475 4760677 -140828611 - AluSg/x SINE Alu 0 318 117 232 152 121 15 chr10 4761136 4761202 -140828086 - MIR SINE MIR -33 229 157 204 355 16 32 chr10 4763183 4763307 -140825981 - MIR SINE MIR -112 150 29 2366 116 16 13 chr10 4763415 4763787 -140825501 + THE1C LTR MaLR 3 375 0 381 158 0 0 chr10 4768324 4768406 -140820882 + GA-rich Low_complexity Low_complexity 2 83 0 23 0 0 0 chr10 4769396 4769419 -140819869 + AT_rich Low_complexity Low_complexity 1 23 0 3727 143 40 22 chr10 4769421 4770141 -140819147 - L1MA7 LINE L1 -3 6288 5556 2821 293 52 52 chr10 4770149 4771559 -140817729 - L1 LINE L1 -4870 1411 1 1392 257 84 53 chr10 4772983 4774103 -140815185 + L1MB7 LINE L1 2 1334 -5208 1238 219 23 23 chr10 4774106 4774408 -140814880 + MER21B-int LTR ERV1 3848 4149 -42 3334 236 47 20 chr10 4774483 4775313 -140813975 + MER21B LTR ERV1 1 852 -11 2063 236 36 51 chr10 4775322 4776103 -140813185 + L1MB7 LINE L1 1325 2093 -4553 258 32 0 0 chr10 4776134 4776165 -140813123 + (TG)n Simple_repeat Simple_repeat 2 32 0 192 77 0 0 chr10 4776164 4776190 -140813098 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 875 228 0 0 chr10 4776261 4776428 -140812860 - MLT2C1 LTR ERVL -61 336 170 3972 205 59 19 chr10 4776429 4777391 -140811897 + L1MC2 LINE L1 5344 6344 0 3726 230 40 37 chr10 4777382 4777989 -140811299 + L1MB7 LINE L1 5186 5789 -893 * 1973 129 7 14 chr10 4777989 4778284 -140811004 + AluSx SINE Alu 7 299 -13 3726 230 40 37 chr10 4778284 4779133 -140810155 + L1MB7 LINE L1 5789 6662 -20 30 45 0 0 chr10 4779736 4779780 -140809508 + AT_rich Low_complexity Low_complexity 1 44 0 684 209 19 28 chr10 4782573 4782784 -140806504 - Charlie5 DNA MER1_type -15 2597 2389 246 105 0 0 chr10 4782797 4782835 -140806453 + (TA)n Simple_repeat Simple_repeat 1 38 0 424 251 123 25 chr10 4783164 4783399 -140805889 - LTR16A LTR ERVL -161 289 32 428 220 10 0 chr10 4783460 4783560 -140805728 + L1MA9 LINE L1 6047 6147 -165 942 76 52 6 chr10 4783580 4783752 -140805536 + GA-rich Low_complexity Low_complexity 1 180 0 267 79 0 0 chr10 4783752 4783790 -140805498 + (GGAA)n Simple_repeat Simple_repeat 3 40 0 301 215 118 0 chr10 4783813 4783906 -140805382 + L1MA9 LINE L1 6170 6273 -39 261 315 55 20 chr10 4785079 4785225 -140804063 + MLT1L LTR MaLR 465 615 0 25 0 0 0 chr10 4785332 4785357 -140803931 + AT_rich Low_complexity Low_complexity 1 25 0 26 64 0 0 chr10 4786052 4786099 -140803189 + AT_rich Low_complexity Low_complexity 1 47 0 1927 156 0 10 chr10 4786153 4786454 -140802834 - AluJb SINE Alu -14 298 1 2236 156 46 5 chr10 4786479 4786890 -140802398 + MSTA LTR MaLR 1 428 0 350 290 194 53 chr10 4786890 4787549 -140801739 + L1M4 LINE L1 2735 3486 -2660 4950 138 31 42 chr10 4787653 4788562 -140800726 - MER49 LTR ERV1 -24 899 1 1907 239 102 47 chr10 4788706 4789108 -140800180 - L1MC4 LINE L1 -343 7699 7320 1951 143 50 34 chr10 4789108 4789466 -140799822 + THE1B LTR MaLR 1 364 0 1907 239 102 47 chr10 4789466 4789802 -140799486 - L1MC4 LINE L1 -722 7320 6921 22 35 0 0 chr10 4789804 4789833 -140799455 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr10 4790137 4790166 -140799122 + AT_rich Low_complexity Low_complexity 1 29 0 28 0 0 0 chr10 4792324 4792352 -140796936 + AT_rich Low_complexity Low_complexity 1 28 0 7659 33 3 1 chr10 4792352 4793282 -140796006 - L1PA3 LINE L1 -3 6152 5210 544 295 108 38 chr10 4793546 4793915 -140795373 - L2 LINE L2 0 3313 2919 382 264 9 9 chr10 4793980 4794090 -140795198 + L2 LINE L2 2154 2263 -1051 959 134 210 0 chr10 4794276 4794462 -140794826 + AluSp SINE Alu 83 307 -6 21 57 0 0 chr10 4794617 4794652 -140794636 + AT_rich Low_complexity Low_complexity 1 35 0 1423 158 36 43 chr10 4795495 4795774 -140793514 - AluJo SINE Alu -19 293 17 369 320 51 37 chr10 4796687 4796819 -140792469 - L1ME LINE L1 -338 5783 5654 2193 96 4 0 chr10 4796819 4797127 -140792161 - AluSg SINE Alu 0 309 1 369 320 51 37 chr10 4797127 4797287 -140792001 - L1ME LINE L1 -467 5654 5486 22 0 0 0 chr10 4797357 4797379 -140791909 + AT_rich Low_complexity Low_complexity 1 22 0 396 252 176 25 chr10 4797784 4797943 -140791345 - MIR SINE MIR -4 258 76 236 260 39 0 chr10 4798057 4798134 -140791154 - MER116 DNA Mariner 0 80 1 23 78 0 0 chr10 4798161 4798212 -140791076 + AT_rich Low_complexity Low_complexity 1 51 0 1467 280 83 26 chr10 4798308 4799065 -140790223 + L1M4 LINE L1 3758 4557 -1589 282 303 92 26 chr10 4799784 4799936 -140789352 - HERV16 LTR ERVL -3819 1177 1016 297 326 64 35 chr10 4800302 4800474 -140788814 - MIR SINE MIR -71 191 15 298 319 6 75 chr10 4800730 4800890 -140788398 + MER5A DNA MER1_type 35 183 -6 189 107 0 0 chr10 4803614 4803642 -140785646 + (T)n Simple_repeat Simple_repeat 1 28 0 272 260 250 0 chr10 4804329 4804429 -140784859 - L2 LINE L2 0 3313 3189 29 28 0 0 chr10 4804663 4804699 -140784589 + AT_rich Low_complexity Low_complexity 1 36 0 363 282 99 42 chr10 4805072 4805214 -140784074 - MER5B DNA MER1_type -27 151 2 447 263 67 89 chr10 4807306 4807765 -140781523 - MLT1E LTR MaLR -101 534 1 1301 270 20 5 chr10 4807765 4808169 -140781119 + L1M4 LINE L1 3718 4127 -2019 852 167 0 0 chr10 4808171 4808297 -140780991 + AluJb SINE Alu 164 289 -23 445 234 138 5 chr10 4808304 4808492 -140780796 + L1M4 LINE L1 4626 4838 -1308 228 284 75 75 chr10 4808736 4808870 -140780418 + MLT1H LTR MaLR 400 533 -16 192 77 0 0 chr10 4809398 4809424 -140779864 + (A)n Simple_repeat Simple_repeat 1 26 0 4361 164 73 32 chr10 4809968 4810854 -140778434 + MER49 LTR ERV1 1 923 0 401 282 34 0 chr10 4810980 4811039 -140778249 - L1MA10 LINE L1 -1 6333 6275 1371 258 38 21 chr10 4811039 4811515 -140777773 - L1ME1 LINE L1 -54 6112 5629 697 207 14 7 chr10 4811538 4811678 -140777610 + MLT1A1 LTR MaLR 1 141 -224 2262 51 0 0 chr10 4811709 4811985 -140777303 - L1PA5 LINE L1 -13 6141 5866 1435 64 30 0 chr10 4811985 4812188 -140777100 + L1P LINE L1 5195 5403 -743 1334 160 26 0 chr10 4812198 4812429 -140776859 + MLT1A1 LTR MaLR 127 363 -2 305 303 111 25 chr10 4812429 4812591 -140776697 - L1ME1 LINE L1 -547 5615 5440 947 198 70 107 chr10 4812600 4812792 -140776496 - L1ME1 LINE L1 -1117 5029 4831 864 181 45 77 chr10 4812792 4813013 -140776275 + MER20 DNA MER1_type 2 215 -4 947 198 70 107 chr10 4813013 4813249 -140776039 - L1ME1 LINE L1 -1315 4831 4617 6233 258 52 34 chr10 4813255 4813658 -140775630 - L1M4 LINE L1 -1300 4846 4452 1580 194 0 14 chr10 4813658 4813942 -140775346 - AluJo SINE Alu -32 280 1 6233 258 52 34 chr10 4813942 4816222 -140773066 - L1M4 LINE L1 -1694 4452 2113 1060 303 125 8 chr10 4816239 4817192 -140772096 - L1MDa LINE L1 -5313 1227 20 367 151 40 0 chr10 4817713 4817839 -140771449 + (TA)n Simple_repeat Simple_repeat 2 132 0 3795 152 102 67 chr10 4817839 4818710 -140770578 + MER21A LTR ERV1 13 914 -17 34 42 0 0 chr10 4819038 4819086 -140770202 + AT_rich Low_complexity Low_complexity 1 48 0 189 195 0 0 chr10 4820115 4820156 -140769132 + (TG)n Simple_repeat Simple_repeat 2 42 0 379 257 36 12 chr10 4820242 4820470 -140768818 + L1ME LINE L1 1352 1747 -4951 1064 240 86 17 chr10 4820499 4820926 -140768362 + L1ME LINE L1 5813 6286 -675 189 0 0 0 chr10 4820926 4820947 -140768341 + (TTAAA)n Simple_repeat Simple_repeat 5 25 0 1064 240 86 17 chr10 4820947 4821157 -140768131 + L1ME LINE L1 6286 6480 -481 1663 168 44 3 chr10 4821235 4821772 -140767516 + LTR26 LTR ERV1 1 603 0 1948 241 109 21 chr10 4821786 4822418 -140766870 - MER76 LTR ERV 0 688 1 23 0 0 0 chr10 4824328 4824351 -140764937 + AT_rich Low_complexity Low_complexity 1 23 0 261 218 0 0 chr10 4824917 4824972 -140764316 + C-rich Low_complexity Low_complexity 1 55 0 447 150 0 0 chr10 4825138 4825218 -140764070 + L1MA3 LINE L1 6226 6305 0 2227 116 0 19 chr10 4827067 4827386 -140761902 + AluSq SINE Alu 1 313 0 410 355 133 33 chr10 4827871 4828632 -140760656 - L2 LINE L2 -411 2903 2067 233 268 16 65 chr10 4828739 4828862 -140760426 + L1MCb LINE L1 421 537 -5885 943 225 25 49 chr10 4828866 4829191 -140760097 - LTR57 LTR ERVL 0 411 95 332 377 60 20 chr10 4829387 4829639 -140759649 - L2 LINE L2 -792 2522 2261 2027 223 12 0 chr10 4830057 4830456 -140758832 - LTR57 LTR ERVL 0 411 8 1558 275 67 28 chr10 4830688 4831793 -140757495 + L1MCb LINE L1 1215 2563 -4559 2117 201 21 23 chr10 4831796 4832328 -140756960 - L1MA9 LINE L1 -1 6311 5781 1333 268 47 32 chr10 4832328 4832585 -140756703 + L1MCb LINE L1 2863 3115 -3826 683 216 31 0 chr10 4832585 4832747 -140756541 + L1MB7 LINE L1 6010 6176 -8 1333 268 47 32 chr10 4832747 4833348 -140755940 + L1MCb LINE L1 3115 3698 -3243 3973 188 13 11 chr10 4834067 4834816 -140754472 + L1PA13 LINE L1 1114 1864 -4923 268 299 49 56 chr10 4834852 4834996 -140754292 - MIR3 SINE MIR -65 143 1 1225 151 103 0 chr10 4836890 4837122 -140752166 - L1MA8 LINE L1 -41 6250 5995 748 167 7 21 chr10 4837792 4837936 -140751352 + FRAM SINE Alu 11 152 -24 22 35 0 0 chr10 4838713 4838742 -140750546 + AT_rich Low_complexity Low_complexity 1 29 0 394 261 84 14 chr10 4838874 4839016 -140750272 - MIR3 SINE MIR -33 175 24 204 97 0 0 chr10 4839684 4839715 -140749573 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 22 0 0 0 chr10 4839989 4840011 -140749277 + AT_rich Low_complexity Low_complexity 1 22 0 292 362 9 0 chr10 4840481 4840586 -140748702 - MER5A DNA MER1_type -80 109 4 352 304 76 49 chr10 4840597 4840781 -140748507 + MER5A DNA MER1_type 1 189 0 820 140 47 0 chr10 4841024 4841174 -140748114 - MER5A DNA MER1_type -22 167 11 28 29 0 0 chr10 4841681 4841716 -140747572 + AT_rich Low_complexity Low_complexity 1 35 0 984 211 122 96 chr10 4842243 4842666 -140746622 - MER66A LTR ERV1 -5 579 179 2101 147 0 0 chr10 4842666 4842978 -140746310 - AluSx SINE Alu 0 312 1 984 211 122 96 chr10 4842978 4843064 -140746224 - MER66A LTR ERV1 -405 179 97 642 296 32 20 chr10 4843130 4843471 -140745817 - L1MC/D LINE L1 -2172 5636 5292 1998 132 3 0 chr10 4843644 4843940 -140745348 + AluSc SINE Alu 1 297 -12 473 268 81 4 chr10 4844173 4844419 -140744869 - L1MC/D LINE L1 -2817 3329 3065 384 220 18 9 chr10 4844448 4844557 -140744731 + L1ME LINE L1 5000 5109 -1037 301 97 0 88 chr10 4844707 4844820 -140744468 + (TAAA)n Simple_repeat Simple_repeat 2 104 0 1606 223 26 37 chr10 4844826 4845355 -140743933 + L1ME LINE L1 5157 5683 -483 2335 85 0 26 chr10 4846921 4847263 -140742025 - L1PA8 LINE L1 -2 6170 5838 21 0 0 0 chr10 4847412 4847433 -140741855 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 4848721 4848749 -140740539 + AT_rich Low_complexity Low_complexity 1 28 0 245 322 0 11 chr10 4849788 4849878 -140739410 + (CA)n Simple_repeat Simple_repeat 1 89 0 251 233 17 0 chr10 4850030 4850090 -140739198 - MLT1G1 LTR MaLR 0 595 535 23 0 0 0 chr10 4850657 4850680 -140738608 + AT_rich Low_complexity Low_complexity 1 23 0 2190 116 7 0 chr10 4850867 4851159 -140738129 + AluSc SINE Alu 6 299 -10 317 228 12 64 chr10 4851231 4851402 -140737886 + L1MEd LINE L1 1055 1216 -4903 200 189 0 0 chr10 4851449 4851486 -140737802 + (TG)n Simple_repeat Simple_repeat 2 38 0 231 300 120 10 chr10 4852171 4852271 -140737017 + MLT1I LTR MaLR 31 141 -268 2280 91 0 0 chr10 4852991 4853288 -140736000 - AluY SINE Alu -14 297 1 605 270 17 31 chr10 4854038 4854291 -140734997 + MER77 LTR ERV1 450 745 -7 2282 241 55 29 chr10 4854322 4855123 -140734165 + MER77-int LTR ERV1 3261 4130 -61 1531 265 81 21 chr10 4855657 4856174 -140733114 + MER77 LTR ERV1 51 598 -7 322 288 16 16 chr10 4856184 4856309 -140732979 + L1MC4 LINE L1 7434 7558 -484 243 272 29 39 chr10 4856436 4856539 -140732749 - MLT1K LTR MaLR -347 241 140 1601 169 20 30 chr10 4857143 4857444 -140731844 - AluJo SINE Alu -14 298 1 232 211 0 18 chr10 4858534 4858591 -140730697 + A-rich Low_complexity Low_complexity 3 58 0 22 0 0 0 chr10 4858817 4858839 -140730449 + AT_rich Low_complexity Low_complexity 1 22 0 36867 93 20 19 chr10 4959554 4965289 -140623999 + Harlequin LTR ERV1 17 4944 0 608 195 43 43 chr10 4965290 4965592 -140623696 + Harlequin LTR ERV1 840 1141 -5755 * 8756 94 72 69 chr10 4965588 4968095 -140621193 + pTR5 LTR ERV1 504 8399 0 2258 105 0 10 chr10 4968488 4968784 -140620504 - AluSx SINE Alu -19 293 1 247 308 75 0 chr10 4970144 4970264 -140619024 + L1MC4 LINE L1 6929 7057 -985 241 264 109 29 chr10 4970449 4970623 -140618665 + L1M4 LINE L1 4415 4602 -1544 204 177 38 25 chr10 4971251 4971330 -140617958 + (TA)n Simple_repeat Simple_repeat 2 81 0 982 282 111 24 chr10 4971392 4971843 -140617445 + MLT1H LTR MaLR 43 532 -17 278 142 12 6 chr10 4972065 4972312 -140616976 + AluSq SINE Alu 1 306 -2 269 194 45 0 chr10 4972864 4972931 -140616357 + MER5A DNA MER1_type 7 76 -113 262 361 0 0 chr10 4973470 4973589 -140615699 + L1MC4 LINE L1 6888 7006 -1036 26 0 0 0 chr10 4973621 4973647 -140615641 + AT_rich Low_complexity Low_complexity 1 26 0 21 36 0 0 chr10 4973908 4973936 -140615352 + AT_rich Low_complexity Low_complexity 1 28 0 344 230 80 102 chr10 4974120 4974481 -140614807 + L1MC4 LINE L1 7690 8042 0 1771 62 0 37 chr10 4974701 4974945 -140614343 + L1P LINE L1 553 787 -5359 * 15140 48 3 2 chr10 4974943 4976812 -140612476 + L1P LINE L1 2466 4335 -1811 29263 26 1 0 chr10 4976912 4981100 -140608188 + L1PA3 LINE L1 1967 6155 0 381 308 64 0 chr10 4981102 4981258 -140608030 + HERVL LTR ERVL 293 458 -5306 330 356 40 7 chr10 4981249 4981398 -140607890 + HERVL LTR ERVL 126 279 -5375 * 688 250 0 0 chr10 4981408 4981568 -140607720 - L1P LINE L1 -928 5218 5059 1967 208 45 14 chr10 4981678 4982097 -140607191 - MSTB1 LTR MaLR 0 432 1 2296 253 20 42 chr10 4982110 4982707 -140606581 - MSTB1-int LTR MaLR -92 1559 976 239 247 21 32 chr10 4982949 4983042 -140606246 + GA-rich Low_complexity Low_complexity 5 96 0 722 229 85 106 chr10 4983104 4983576 -140605712 - MER4C LTR ERV1 0 465 4 268 270 14 0 chr10 4983613 4983687 -140605601 - MER4C-int LTR ERV1 -126 6472 6398 7491 185 53 22 chr10 4983816 4985560 -140603728 - MER4C-int LTR ERV1 -575 5756 3959 4248 140 15 58 chr10 4985560 4986282 -140603006 - LTR8 LTR ERV1 0 691 1 2333 114 0 0 chr10 4986297 4986596 -140602692 - AluSx SINE Alu -13 299 1 2552 151 73 14 chr10 4986596 4987033 -140602255 - HUERS-P1 LTR ERV1 -7 6256 5794 323 239 114 0 chr10 4987043 4987131 -140602157 + LTR49-int LTR ERV1 6045 6142 -189 1031 184 22 0 chr10 4987143 4987328 -140601960 + LTR49-int LTR ERV1 5816 6004 -327 902 120 84 0 chr10 4987342 4987484 -140601804 - MER39B LTR ERV1 -499 154 1 497 204 19 0 chr10 4987484 4987584 -140601704 + LTR49 LTR ERV1 492 593 -2 486 320 31 16 chr10 4987603 4987797 -140601491 - LTR40a LTR ERVL -322 197 1 314 274 63 84 chr10 4987797 4987987 -140601301 + L2 LINE L2 3128 3313 0 2130 117 163 14 chr10 4988217 4988586 -140600702 - MSTA LTR MaLR -4 424 1 525 240 91 39 chr10 4989892 4990146 -140599142 + ORSL DNA AcHobo 9 275 0 260 284 93 47 chr10 4990551 4990787 -140598501 + Charlie2 DNA MER1_type 33 279 -2503 424 316 83 18 chr10 4990823 4991101 -140598187 + MER92B LTR ERV1 250 545 -91 297 127 38 13 chr10 4991265 4991344 -140597944 + (TCTA)n Simple_repeat Simple_repeat 1 81 0 315 232 71 19 chr10 4991536 4991691 -140597597 + Charlie2 DNA MER1_type 2696 2858 -4 242 323 31 31 chr10 4992133 4992229 -140597059 - MIR SINE MIR -93 115 20 994 257 73 16 chr10 4992677 4993058 -140596230 + L1ME2 LINE L1 5696 6098 -66 705 261 39 32 chr10 4993678 4993958 -140595330 + L1MC4 LINE L1 6762 7043 -999 284 261 63 56 chr10 4993988 4994130 -140595158 + L1MC5 LINE L1 7322 7464 -497 586 258 112 29 chr10 4994139 4994557 -140594731 + L2 LINE L2 2009 2461 -853 378 319 127 0 chr10 4995343 4995500 -140593788 - MIR3 SINE MIR -6 202 26 236 261 11 0 chr10 4995779 4995871 -140593417 + (TG)n Simple_repeat Simple_repeat 1 93 0 192 270 81 27 chr10 4997319 4997393 -140591895 - MIR SINE MIR -75 187 110 365 148 0 148 chr10 4998359 4998447 -140590841 + MER61E LTR ERV1 37 111 -458 * 382 198 0 25 chr10 4998427 4998508 -140590780 + LTR25 LTR ERV1 215 293 -501 2305 177 50 64 chr10 4998627 4999199 -140590089 + LTR25 LTR ERV1 251 569 0 3721 198 50 28 chr10 4999202 5000016 -140589272 + LTR25-int LTR ERV1 3 834 -6162 5483 2 0 0 chr10 5000116 5000708 -140588580 + L1HS LINE L1 5564 6155 0 1844 137 23 31 chr10 5000713 5001270 -140588018 + LTR10E LTR ERV1 8 612 -21 241 189 126 31 chr10 5001886 5002013 -140587275 + LTR33A LTR ERVL 324 462 -61 350 315 124 35 chr10 5002458 5002772 -140586516 - L2 LINE L2 -1 3312 2971 1569 188 23 31 chr10 5003054 5003182 -140586106 + MLT1A1 LTR MaLR 12 140 -225 2427 154 56 5 chr10 5003182 5003591 -140585697 - MSTB1 LTR MaLR -2 430 1 1569 188 23 31 chr10 5003591 5003814 -140585474 + MLT1A1 LTR MaLR 140 360 -5 378 183 97 11 chr10 5004013 5004106 -140585182 - MSTB2 LTR MaLR 0 457 357 22142 58 8 5 chr10 5004106 5007616 -140581672 + L1PA5 LINE L1 2628 6149 -5 837 252 59 50 chr10 5007744 5008085 -140581203 - L1MC4 LINE L1 -201 7841 7498 2623 162 41 9 chr10 5008571 5009010 -140580278 + MER6 DNA MER2_type 2 454 -411 759 253 113 76 chr10 5009900 5010323 -140578965 - LTR32 LTR ERVL -27 444 6 281 145 194 0 chr10 5010297 5010359 -140578929 - LTR32 LTR ERVL -383 88 15 * 297 136 0 0 chr10 5010357 5010401 -140578887 - LTR32 LTR ERVL -413 58 15 264 177 194 0 chr10 5010381 5010443 -140578845 - LTR32 LTR ERVL -383 88 15 * 346 104 224 0 chr10 5010424 5010491 -140578797 - LTR32 LTR ERVL -384 87 6 287 145 194 0 chr10 5010465 5010527 -140578761 - LTR32 LTR ERVL -383 88 15 * 290 159 0 0 chr10 5010525 5010569 -140578719 - LTR32 LTR ERVL -413 58 15 258 242 100 23 chr10 5011201 5011298 -140577990 - MER5B DNA MER1_type -4 174 75 2305 76 0 3 chr10 5011298 5011589 -140577699 - AluY SINE Alu -21 290 1 258 242 100 23 chr10 5011589 5011608 -140577680 - MER5B DNA MER1_type -103 75 59 2956 163 64 12 chr10 5011626 5012192 -140577096 + LTR49 LTR ERV1 1 595 0 1147 209 32 66 chr10 5012526 5012904 -140576384 + MER31A LTR ERV1 1 365 -120 6436 84 12 12 chr10 5012904 5013810 -140575478 - PABL_A-int LTR ERV1 -401 4614 3709 521 253 70 19 chr10 5013910 5014068 -140575220 + Tigger1 DNA MER2_type 2252 2417 -1 956 225 16 0 chr10 5014471 5014662 -140574626 + MER7A DNA MER2_type 12 203 -143 44945 40 1 4 chr10 5014690 5020862 -140568426 - L1PA3 LINE L1 -2 6153 2 861 81 0 65 chr10 5020977 5021101 -140568187 + AluSc SINE Alu 54 169 -140 2084 113 28 0 chr10 5021123 5021407 -140567881 - AluSx SINE Alu -20 292 1 465 275 51 29 chr10 5021414 5021552 -140567736 + MER7A DNA MER2_type 197 337 0 765 242 36 12 chr10 5021552 5021800 -140567488 - L1M4c LINE L1 -4006 2378 2125 2020 145 0 20 chr10 5022116 5022419 -140566869 - AluSx SINE Alu -6 306 10 2339 91 0 0 chr10 5022540 5022838 -140566450 - AluY SINE Alu -13 298 1 25 51 0 0 chr10 5022913 5022952 -140566336 + AT_rich Low_complexity Low_complexity 1 39 0 643 338 61 7 chr10 5023089 5023385 -140565903 - L2 LINE L2 -890 2424 2113 1916 158 0 3 chr10 5025767 5026064 -140563224 - AluSx SINE Alu -16 296 1 1794 227 65 8 chr10 5027178 5027579 -140561709 + MSTB LTR MaLR 1 424 -2 2127 225 20 4 chr10 5027581 5028039 -140561249 + MSTB-int LTR MaLR 1 465 -1186 315 256 39 45 chr10 5028594 5028750 -140560538 + L1M4 LINE L1 5115 5269 -877 284 263 103 39 chr10 5028765 5028921 -140560367 + MLT1H LTR MaLR 357 522 -27 186 229 12 108 chr10 5029098 5029181 -140560107 - MIR3 SINE MIR -39 169 95 358 234 84 0 chr10 5029664 5029771 -140559517 + MER5A DNA MER1_type 1 116 -73 409 299 72 14 chr10 5030200 5030421 -140558867 + L1MC4 LINE L1 6832 7065 -977 2187 128 51 26 chr10 5030477 5030828 -140558460 + THE1B LTR MaLR 3 362 -2 9293 164 34 37 chr10 5030830 5031657 -140557631 + THE1B-int LTR MaLR 15 836 -744 2357 86 0 20 chr10 5031657 5031960 -140557328 + AluSg SINE Alu 1 297 -13 9293 164 34 37 chr10 5031960 5032701 -140556587 + THE1B-int LTR MaLR 836 1578 -2 1985 130 103 30 chr10 5032703 5033042 -140556246 + THE1B LTR MaLR 1 364 0 23 0 0 0 chr10 5033148 5033171 -140556117 + AT_rich Low_complexity Low_complexity 1 23 0 386 242 114 72 chr10 5033269 5033533 -140555755 + L1MC4 LINE L1 7210 7484 -558 353 171 0 26 chr10 5033837 5033913 -140555375 + L1MC5 LINE L1 7603 7676 -285 252 304 22 29 chr10 5036519 5036657 -140552631 + L2 LINE L2 1790 1926 -1388 1932 256 26 37 chr10 5038799 5039451 -140549837 + L1PB2 LINE L1 3 647 -6216 884 194 16 0 chr10 5039462 5039584 -140549704 + L1PB2 LINE L1 4275 4402 -2460 360 0 0 0 chr10 5039584 5039624 -140549664 + (CA)n Simple_repeat Simple_repeat 2 41 0 884 194 16 0 chr10 5039624 5039687 -140549601 + L1PB2 LINE L1 4402 4463 -2399 405 0 0 0 chr10 5039990 5040035 -140549253 + (CA)n Simple_repeat Simple_repeat 2 46 0 6354 181 79 10 chr10 5040035 5041947 -140547341 + L1PB2 LINE L1 4404 6453 -414 1919 179 22 11 chr10 5042050 5042414 -140546874 + L1PB2 LINE L1 6498 6865 -2 4185 130 56 73 chr10 5042899 5043697 -140545591 - LTR1 LTR ERV1 0 785 1 238 352 34 0 chr10 5043810 5043898 -140545390 - MER81 DNA DNA 0 114 24 258 303 0 0 chr10 5043920 5043986 -140545302 - MER68 LTR ERV1 -6 556 491 1332 179 21 69 chr10 5044000 5044291 -140544997 - AluJb SINE Alu -27 285 9 1292 289 61 7 chr10 5044318 5044743 -140544545 - MER68 LTR ERV1 -114 448 1 1224 239 108 49 chr10 5045359 5045887 -140543401 + MER31-int LTR ERV1 1914 2472 -2464 2339 86 0 13 chr10 5045929 5046231 -140543057 - AluSp SINE Alu -15 298 1 222 312 136 0 chr10 5047149 5047303 -140541985 + L2 LINE L2 1783 1957 -1357 387 277 84 47 chr10 5050051 5050333 -140538955 - MER68 LTR ERV1 -6 599 238 489 237 0 23 chr10 5052701 5052832 -140536456 + U8 snRNA snRNA 5 132 -4 2106 280 33 29 chr10 5053363 5054375 -140534913 + L1M4c LINE L1 806 1821 -4563 655 243 83 25 chr10 5054391 5054786 -140534502 + L1M4c LINE L1 1932 2349 -4035 228 296 0 0 chr10 5054789 5054843 -140534445 - Tigger3(Golem) DNA MER2_type -1 3028 2975 * 606 223 0 0 chr10 5054839 5054978 -140534310 + MLT1D LTR MaLR 364 502 -3 1103 286 106 24 chr10 5054980 5055441 -140533847 + L2 LINE L2 1589 2087 -1227 305 317 10 0 chr10 5055501 5055602 -140533686 + L1M4c LINE L1 955 1056 -5793 713 326 25 0 chr10 5055958 5056200 -140533088 + L1PA15-16 LINE L1 1263 1510 -5339 3214 255 52 33 chr10 5056305 5057855 -140531433 + L1PA15-16 LINE L1 2373 3999 -2850 2020 127 30 10 chr10 5057855 5058155 -140531133 + AluSx SINE Alu 1 306 -6 3214 255 52 33 chr10 5058155 5058251 -140531037 + L1PA15-16 LINE L1 3999 4092 -2757 * 26476 42 5 1 chr10 5058232 5061758 -140527530 + L1P2 LINE L1 1921 5460 -695 204 290 153 17 chr10 5062036 5062212 -140527076 + L2 LINE L2 1798 1997 -1317 966 303 94 16 chr10 5064957 5065469 -140523819 - MER68 LTR ERV1 -10 552 1 23 33 0 0 chr10 5067361 5067391 -140521897 + AT_rich Low_complexity Low_complexity 1 30 0 416 258 38 30 chr10 5067748 5067880 -140521408 + U8 snRNA snRNA 1 133 -3 225 265 68 34 chr10 5068206 5068323 -140520965 + L1M4c LINE L1 1016 1136 -5714 2194 246 40 50 chr10 5068403 5068440 -140520848 + L1M4c LINE L1 1243 1279 -5571 2025 123 3 10 chr10 5068440 5068733 -140520555 + AluSc SINE Alu 1 291 -18 2194 246 40 50 chr10 5068733 5069395 -140519893 + L1M4c LINE L1 1279 1946 -4904 1675 147 30 4 chr10 5069395 5069660 -140519628 + AluSx SINE Alu 36 307 -5 2194 246 40 50 chr10 5069660 5069826 -140519462 + L1M4c LINE L1 1946 2112 -4738 2048 122 17 0 chr10 5069826 5070113 -140519175 - AluSc SINE Alu -17 292 1 2194 246 40 50 chr10 5070113 5070300 -140518988 + L1M4c LINE L1 2112 2286 -4564 535 264 39 10 chr10 5070391 5070599 -140518689 + L1M4c LINE L1 2494 2707 -4143 2671 264 10 8 chr10 5070676 5071398 -140517890 - MST-int LTR MaLR -19 1632 910 223 208 0 38 chr10 5071643 5071696 -140517592 + GA-rich Low_complexity Low_complexity 2 52 0 3648 181 74 15 chr10 5072600 5073380 -140515908 + LTR1B LTR ERV1 1 826 0 524 258 19 80 chr10 5073874 5074235 -140515053 + L1 LINE L1 4982 5320 -826 386 165 13 25 chr10 5074249 5074328 -140514960 + L1PA15-16 LINE L1 1202 1279 -5570 * 666 203 120 0 chr10 5074326 5074484 -140514804 + L1PB4 LINE L1 5980 6156 0 196 290 16 16 chr10 5074493 5074555 -140514733 + MER5B DNA MER1_type 49 110 -68 1500 253 26 17 chr10 5075355 5075821 -140513467 + MLT1D LTR MaLR 36 505 0 711 302 60 0 chr10 5075828 5076093 -140513195 + L2 LINE L2 1598 1878 -1436 883 144 7 7 chr10 5076094 5076247 -140513041 + L1PA13 LINE L1 6004 6156 -7 22 88 0 0 chr10 5076778 5076835 -140512453 + AT_rich Low_complexity Low_complexity 1 57 0 378 192 48 29 chr10 5076850 5076954 -140512334 + LTR49-int LTR ERV1 1015 1120 -5211 1888 214 28 37 chr10 5077230 5077773 -140511515 - L1MB3 LINE L1 0 6183 5646 313 153 17 0 chr10 5077773 5077832 -140511456 - MER4A LTR ERV1 0 664 605 3557 286 15 1 chr10 5077837 5078755 -140510533 - PABL_B-int LTR ERV1 -2438 4684 3754 384 252 15 22 chr10 5078758 5078893 -140510395 + MER67C LTR ERV1 561 694 -16 1927 130 132 43 chr10 5079291 5079684 -140509604 - MSTA LTR MaLR 0 428 1 6314 182 7 12 chr10 5079685 5080854 -140508434 - MSTA-int LTR MaLR -1 1579 417 254 220 0 0 chr10 5080891 5080950 -140508338 - MSTA-int LTR MaLR -1159 421 363 291 176 14 68 chr10 5082685 5082749 -140506539 + U8 snRNA snRNA 1 62 -74 1966 139 36 0 chr10 5082749 5083050 -140506238 + AluSx SINE Alu 1 312 0 510 144 0 0 chr10 5083076 5083166 -140506122 - L1P5 LINE L1 -647 5509 5420 285 258 27 5 chr10 5083516 5083640 -140505648 + L1M4c LINE L1 650 925 -5721 344 188 36 80 chr10 5083691 5083803 -140505485 + L1M4c LINE L1 1035 1141 -5505 1417 252 6 6 chr10 5083875 5084240 -140505048 - L1PA16 LINE L1 -18 6148 5784 7918 248 43 7 chr10 5084288 5086687 -140502601 - L1PA16 LINE L1 -622 5534 2999 2183 108 0 7 chr10 5086687 5086984 -140502304 - AluSg1 SINE Alu -14 295 1 7918 248 43 7 chr10 5086984 5087565 -140501723 - L1PA16 LINE L1 -3157 2999 2440 226 277 0 0 chr10 5087568 5087651 -140501637 - L1 LINE L1 -3759 2387 2305 29 28 0 0 chr10 5087651 5087687 -140501601 + AT_rich Low_complexity Low_complexity 1 36 0 6172 190 14 4 chr10 5087687 5088993 -140500295 - L1P LINE L1 -1032 5114 3795 380 276 37 29 chr10 5089062 5089305 -140499983 + L1M4c LINE L1 2641 2885 -3759 853 179 68 8 chr10 5089320 5089554 -140499734 - Tigger1 DNA MER2_type 0 2418 2171 1262 295 124 32 chr10 5089557 5090519 -140498769 + L2 LINE L2 2246 3308 -5 751 290 70 35 chr10 5090717 5091180 -140498108 - MLT1E LTR MaLR -97 496 17 353 350 104 30 chr10 5091616 5091953 -140497335 + L3 LINE CR1 595 956 -621 23 68 0 0 chr10 5092088 5092132 -140497156 + AT_rich Low_complexity Low_complexity 1 44 0 2377 87 0 0 chr10 5092201 5092499 -140496789 - AluY SINE Alu -13 298 1 231 228 158 40 chr10 5093906 5094007 -140495281 - MIR SINE MIR 0 262 150 2272 190 69 15 chr10 5094242 5094777 -140494511 - LTR25 LTR ERV1 -4 788 244 506 74 0 25 chr10 5094799 5094880 -140494408 - LTR25 LTR ERV1 -501 293 215 286 187 0 165 chr10 5094860 5094951 -140494337 - MER61E LTR ERV1 -458 111 36 * 1922 199 10 20 chr10 5094975 5095477 -140493811 - MER61E-int LTR ERV1 -5 6991 6495 6710 204 36 34 chr10 5095590 5095788 -140493500 - MER61E-int LTR ERV1 -967 6451 6255 2080 125 7 3 chr10 5095788 5096083 -140493205 - AluSx SINE Alu -16 296 1 6710 204 36 34 chr10 5096083 5097571 -140491717 - MER61E-int LTR ERV1 -1163 6255 4763 25821 43 3 3 chr10 5097571 5101712 -140487576 + L1P LINE L1 1 4131 -2015 347 319 37 12 chr10 5102404 5102567 -140486721 + MER92B LTR ERV1 242 408 -228 225 0 48 48 chr10 5102653 5102695 -140486593 + (CAAAA)n Simple_repeat Simple_repeat 5 46 0 365 233 43 0 chr10 5102859 5102975 -140486313 + (TCTA)n Simple_repeat Simple_repeat 3 123 0 21 57 0 0 chr10 5103045 5103080 -140486208 + AT_rich Low_complexity Low_complexity 1 35 0 328 210 87 43 chr10 5103177 5103315 -140485973 + Charlie2 DNA MER1_type 2719 2862 0 271 323 0 83 chr10 5103751 5103884 -140485404 - MIR3 SINE MIR -84 124 3 1220 239 82 30 chr10 5104294 5104733 -140484555 + L1ME2 LINE L1 5690 6151 -13 650 234 33 85 chr10 5105295 5105590 -140483698 + L1MC4 LINE L1 6693 7021 -1006 437 249 69 42 chr10 5105608 5105797 -140483491 + L1MC5 LINE L1 7321 7514 -447 285 244 0 0 chr10 5105797 5105883 -140483405 + GA-rich Low_complexity Low_complexity 3 88 0 592 235 112 76 chr10 5105888 5105937 -140483351 + L1MC5 LINE L1 7472 7518 -443 1982 108 58 0 chr10 5105937 5106214 -140483074 + AluSg SINE Alu 1 293 -17 592 235 112 76 chr10 5106214 5106547 -140482741 + L1MC5 LINE L1 7518 7868 -93 6510 149 35 15 chr10 5106565 5107680 -140481608 + HSMAR2 DNA Mariner 2 1138 -164 393 209 29 0 chr10 5107842 5107947 -140481341 + HSMAR2 DNA Mariner 1192 1299 -3 28 71 0 0 chr10 5107961 5108017 -140481271 + AT_rich Low_complexity Low_complexity 1 56 0 276 333 26 0 chr10 5108284 5108398 -140480890 + MLT1L LTR MaLR 173 289 -326 275 185 0 19 chr10 5108579 5108633 -140480655 + MLT1L LTR MaLR 555 607 -8 32 43 0 0 chr10 5108807 5108853 -140480435 + AT_rich Low_complexity Low_complexity 1 46 0 640 271 124 47 chr10 5109059 5109656 -140479632 + L2 LINE L2 1819 2461 -853 394 308 119 13 chr10 5110446 5110605 -140478683 - MIR3 SINE MIR -6 202 27 414 262 0 0 chr10 5110844 5110993 -140478295 + (TG)n Simple_repeat Simple_repeat 2 150 0 7556 43 12 0 chr10 5112489 5113742 -140475546 + L1PA4 LINE L1 4886 6150 -5 756 222 160 31 chr10 5113748 5113978 -140475310 + MER65-int LTR ERV1 2493 4559 -1704 * 4767 257 21 7 chr10 5113967 5115065 -140474223 + MER65-int LTR ERV1 1584 2696 -6223 1278 79 0 0 chr10 5115066 5115231 -140474057 - LTR19B LTR ERV1 -413 167 3 1322 164 9 0 chr10 5115234 5115448 -140473840 - HERVFH19I LTR ERV1 -1 7718 7503 * 11773 92 9 5 chr10 5115447 5117032 -140472256 - LTR19-int LTR ERV1 -337 5249 3658 13210 51 76 4 chr10 5117132 5118851 -140470437 - L1P LINE L1 -4302 1844 2 1935 195 46 2 chr10 5119000 5119394 -140469894 - MSTB LTR MaLR -15 411 1 372 245 21 21 chr10 5120081 5120175 -140469113 - L1ME1 LINE L1 -5 6161 6068 2583 216 35 24 chr10 5120211 5120836 -140468452 + LTR48B LTR ERV1 13 644 0 1747 257 43 19 chr10 5120836 5121366 -140467922 - L1ME1 LINE L1 -99 6067 5525 665 238 37 56 chr10 5121406 5121620 -140467668 - L1MDa LINE L1 -6244 296 87 217 351 40 35 chr10 5121897 5122099 -140467189 + L2 LINE L2 2971 3173 -140 7757 121 50 1 chr10 5122163 5123325 -140465963 - HSMAR1 DNA Mariner -56 1231 13 29379 116 32 63 chr10 5123325 5126206 -140463082 - L1PA7 LINE L1 -16 6138 3167 210 37 0 0 chr10 5126206 5126233 -140463055 + (TG)n Simple_repeat Simple_repeat 2 28 0 29379 116 32 63 chr10 5126233 5129699 -140459589 - L1PA7 LINE L1 -2987 3167 12 423 218 29 35 chr10 5130869 5131039 -140458249 - L1ME1 LINE L1 -872 5274 5106 256 200 0 0 chr10 5131053 5131103 -140458185 - MERVL-B3 LTR ERVL -5042 443 394 1080 209 50 56 chr10 5131141 5131499 -140457789 - MERVL-B3 LTR ERVL -5298 356 1 231 125 0 0 chr10 5131534 5131574 -140457714 + (TG)n Simple_repeat Simple_repeat 1 40 0 2064 233 27 33 chr10 5131574 5132085 -140457203 - MLT2B3 LTR ERVL -46 508 1 8968 174 48 23 chr10 5132123 5132661 -140456627 + Tigger1 DNA MER2_type 2 525 -1893 2262 92 7 0 chr10 5132661 5132943 -140456345 - AluSg SINE Alu -25 285 2 8968 174 48 23 chr10 5132943 5134202 -140455086 + Tigger1 DNA MER2_type 525 1845 -573 5405 37 0 6 chr10 5134335 5134959 -140454329 + L1PA4 LINE L1 5535 6154 -1 3481 240 11 33 chr10 5134959 5135894 -140453394 + L1 LINE L1 3386 4299 -1847 1033 292 58 18 chr10 5136849 5137243 -140452045 + LTR26 LTR ERV1 191 600 -3 1833 166 0 11 chr10 5137380 5137692 -140451596 - AluSx SINE Alu 0 309 1 802 202 71 158 chr10 5138093 5138738 -140450550 - LTR49 LTR ERV1 0 595 7 2983 133 11 77 chr10 5139470 5139587 -140449701 + MER75 DNA T2_type 1 124 -390 1842 131 0 66 chr10 5139587 5139892 -140449396 - AluSx SINE Alu -27 285 1 2983 133 11 77 chr10 5139892 5140323 -140448965 + MER75 DNA T2_type 124 513 -1 509 169 11 0 chr10 5141520 5141609 -140447679 - MSTD LTR MaLR 0 428 339 201 39 0 0 chr10 5141611 5141637 -140447651 + (GA)n Simple_repeat Simple_repeat 1 26 0 874 186 34 0 chr10 5141649 5141826 -140447462 - MSTD LTR MaLR -213 183 1 2280 105 3 0 chr10 5142147 5142441 -140446847 - AluSp SINE Alu -18 295 1 547 152 132 111 chr10 5142672 5142931 -140446357 - LTR49 LTR ERV1 -1 594 285 518 139 285 7 chr10 5142931 5143068 -140446220 - MER4C LTR ERV1 0 465 291 912 194 155 52 chr10 5143124 5143434 -140445854 - MER4A LTR ERV1 -322 342 1 1398 184 23 0 chr10 5143435 5143694 -140445594 - LTR49 LTR ERV1 -308 287 23 1830 151 3 22 chr10 5143694 5144046 -140445242 - MER4A LTR ERV1 0 664 261 613 121 10 20 chr10 5144046 5144145 -140445143 - MER4A LTR ERV1 -566 98 1 425 224 26 26 chr10 5144172 5144288 -140445000 - MER31B LTR ERV1 -106 360 245 332 180 60 20 chr10 5144671 5144771 -140444517 - MER67C LTR ERV1 0 710 607 1531 143 0 0 chr10 5144772 5144995 -140444293 + AluSg SINE Alu 1 223 -87 360 62 0 0 chr10 5145098 5145146 -140444142 + pTR5 LTR ERV1 345 392 -2046 2213 124 3 0 chr10 5145729 5146036 -140443252 + AluSq SINE Alu 1 308 -5 387 308 0 9 chr10 5147289 5147396 -140441892 - MER68 LTR ERV1 -110 452 347 359 264 64 9 chr10 5149152 5149262 -140440026 + U8 snRNA snRNA 21 136 0 4109 162 70 69 chr10 5149483 5150436 -140438852 + LTR13 LTR ERVK 1 954 0 74202 6 2 3 chr10 5150436 5158562 -140430726 + HERVK13 LTR ERVK 1 8116 0 844 215 52 40 chr10 5158562 5158813 -140430475 + LTR13 LTR ERVK 1 254 -753 13461 55 19 3 chr10 5158818 5160467 -140428821 - HERVK14 LTR ERVK -3083 2862 1188 1768 215 80 67 chr10 5160594 5161180 -140428108 - MER67C LTR ERV1 -89 621 28 2299 221 32 15 chr10 5161514 5162047 -140427241 - MER67A LTR ERV1 -1 542 1 679 335 0 0 chr10 5162245 5162442 -140426846 + MSTD LTR MaLR 200 396 0 1103 256 19 4 chr10 5162639 5162905 -140426383 - MLT1A1 LTR MaLR 0 365 96 2693 130 19 0 chr10 5162905 5163275 -140426013 + MER51B LTR ERV1 1 377 0 1976 166 92 26 chr10 5163275 5163654 -140425634 + MER51B-int LTR ERV1 1 404 -7412 2059 151 3 0 chr10 5163660 5163959 -140425329 - AluSq SINE Alu -13 300 1 879 108 7 7 chr10 5163959 5164107 -140425181 + LTR49-int LTR ERV1 1993 2140 -5676 2049 134 64 0 chr10 5164115 5164443 -140424845 + LTR49-int LTR ERV1 2964 3312 -4504 1498 129 19 23 chr10 5164439 5164703 -140424585 + LTR49-int LTR ERV1 2832 3094 -2852 * 877 143 27 0 chr10 5164706 5164853 -140424435 - GSAT Satellite centromeric -27 190 40 856 172 93 54 chr10 5164855 5165059 -140424229 + LTR49-int LTR ERV1 1762 1973 -3244 * 8231 184 102 69 chr10 5165041 5166492 -140422796 + LTR49-int LTR ERV1 4954 6356 -1460 234 0 0 0 chr10 5166492 5166518 -140422770 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 8231 184 102 69 chr10 5166518 5167720 -140421568 + LTR49-int LTR ERV1 6356 7816 0 838 155 30 24 chr10 5167862 5168030 -140421258 - MSTA-int LTR MaLR -1482 169 1 2104 152 129 28 chr10 5168030 5168418 -140420870 - MSTA LTR MaLR 0 428 2 420 214 19 10 chr10 5168454 5168557 -140420731 + MER31B LTR ERV1 257 360 -106 1954 184 11 3 chr10 5168560 5168908 -140420380 + LTR49 LTR ERV1 3 353 -242 1168 228 35 27 chr10 5168914 5169173 -140420115 - AluJo SINE Alu -49 263 3 744 199 89 171 chr10 5170938 5171586 -140417702 + LTR49 LTR ERV1 1 595 0 1120 280 79 17 chr10 5172089 5172557 -140416731 - LTR26 LTR ERV1 -3 600 104 1008 106 0 35 chr10 5173030 5173171 -140416117 - AluSq/x SINE Alu -175 137 2 682 258 19 24 chr10 5173370 5173604 -140415684 - MLT1E LTR MaLR -98 495 252 189 74 0 0 chr10 5174914 5174941 -140414347 + (TTA)n Simple_repeat Simple_repeat 1 27 0 298 157 20 0 chr10 5175341 5175392 -140413896 - LTR29 LTR ERV1 0 622 571 336 270 0 0 chr10 5176361 5176509 -140412779 + (TG)n Simple_repeat Simple_repeat 1 148 0 2243 210 35 8 chr10 5176541 5177026 -140412262 + L1P LINE L1 4410 4907 -1239 552 103 103 0 chr10 5177034 5177131 -140412157 + L1PA15 LINE L1 6053 6159 -6 1076 160 52 16 chr10 5177168 5177362 -140411926 - MER50 LTR ERV1 -533 201 1 1844 162 10 0 chr10 5177363 5177660 -140411628 - MER50-int LTR ERV1 -24 7181 6882 * 7452 147 14 14 chr10 5177659 5178313 -140410975 - MER41-int LTR ERV1 -463 5483 4827 216 0 0 0 chr10 5178313 5178337 -140410951 + (CAA)n Simple_repeat Simple_repeat 2 25 0 7452 147 14 14 chr10 5178337 5178955 -140410333 - MER41-int LTR ERV1 -1118 4828 4211 3055 174 78 41 chr10 5179057 5179740 -140409548 - pTR5 LTR ERV1 -990 1448 741 570 325 96 17 chr10 5180855 5181147 -140408141 + L2 LINE L2 2110 2424 -890 631 264 66 46 chr10 5181519 5182046 -140407242 + L1M4c LINE L1 1713 2342 -4042 1479 170 120 0 chr10 5182046 5182322 -140406966 + AluSx SINE Alu 1 309 -3 631 264 66 46 chr10 5182322 5182359 -140406929 + L1M4c LINE L1 2342 2377 -4007 297 276 11 11 chr10 5182361 5182448 -140406840 - Tigger3(Golem) DNA MER2_type 0 3038 2952 1820 196 15 15 chr10 5182451 5182843 -140406445 - Tigger1 DNA MER2_type -467 1951 1560 3201 99 47 0 chr10 5182843 5182879 -140406409 - MLT2A1 LTR ERVL 0 444 411 195 69 0 0 chr10 5182879 5182908 -140406380 + (TA)n Simple_repeat Simple_repeat 1 29 0 3201 99 47 0 chr10 5182908 5183295 -140405993 - MLT2A1 LTR ERVL -33 411 1 6984 93 43 6 chr10 5183295 5184279 -140405009 - HERVL-A1 LTR ERVL 0 5654 4635 2058 70 11 22 chr10 5184272 5184543 -140404745 - HERVL-A1 LTR ERVL -1742 3912 3645 * 2128 131 25 0 chr10 5184545 5184865 -140404423 + MER75 DNA T2_type 187 514 0 2064 188 53 14 chr10 5185265 5185681 -140403607 - MSTB1 LTR MaLR 0 432 1 1309 232 27 55 chr10 5185681 5186048 -140403240 - MSTB1-int LTR MaLR 0 1651 1295 2152 150 53 3 chr10 5186051 5186411 -140402877 - MER39B LTR ERV1 -270 383 6 603 181 9 0 chr10 5186414 5186519 -140402769 + LTR49 LTR ERV1 490 595 0 639 291 9 36 chr10 5186520 5186740 -140402548 - LTR40a LTR ERVL -305 214 1 255 317 84 42 chr10 5186780 5186922 -140402366 + L2 LINE L2 3166 3313 0 285 270 93 28 chr10 5187016 5187264 -140402024 + L1ME4a LINE L1 5808 6071 -50 3106 108 82 4 chr10 5187643 5188117 -140401171 + MER9 LTR ERVK 1 511 0 333 208 73 0 chr10 5189306 5189402 -140399886 + ORSL DNA AcHobo 1 103 -172 240 281 141 20 chr10 5189927 5190126 -140399162 + Charlie2 DNA MER1_type 31 253 -2529 287 284 90 19 chr10 5190354 5190509 -140398779 - MER92B LTR ERV1 -97 539 374 185 379 131 0 chr10 5190664 5190817 -140398471 - MIR3 SINE MIR -33 175 3 421 198 69 10 chr10 5191245 5191346 -140397942 + MER5A DNA MER1_type 8 114 -75 404 335 93 4 chr10 5191766 5192023 -140397265 + L1MC4 LINE L1 6783 7062 -980 22 80 0 0 chr10 5192277 5192327 -140396961 + AT_rich Low_complexity Low_complexity 1 50 0 411 241 35 41 chr10 5192434 5192579 -140396709 + L1MC4 LINE L1 7277 7420 -622 12813 213 44 16 chr10 5193088 5195146 -140394142 + L1PB2 LINE L1 2 2000 -4208 2133 114 9 19 chr10 5195146 5195461 -140393827 + AluSx SINE Alu 1 312 0 12813 213 44 16 chr10 5195461 5199882 -140389406 + L1PB2 LINE L1 2000 6045 -163 874 207 38 42 chr10 5200023 5200260 -140389028 + L1PB2 LINE L1 5916 6151 0 1314 199 17 52 chr10 5201019 5201306 -140387982 - AluJb SINE Alu -27 285 9 911 298 40 6 chr10 5201333 5201739 -140387549 - MER68 LTR ERV1 -114 448 1 544 33 55 0 chr10 5203430 5203521 -140385767 + (TCTA)n Simple_repeat Simple_repeat 2 97 0 288 237 66 13 chr10 5204136 5204187 -140385101 + U8 snRNA snRNA 15 73 -63 1561 195 4 0 chr10 5204187 5204444 -140384844 + AluSq SINE Alu 1 258 -55 288 237 66 13 chr10 5204444 5204468 -140384820 + U8 snRNA snRNA 73 94 -42 465 167 1 0 chr10 5204472 5204565 -140384723 - L1P5 LINE L1 -647 5509 5416 457 285 36 28 chr10 5204572 5204821 -140384467 + L1M4 LINE L1 2142 2392 -3754 1004 236 38 4 chr10 5204831 5205094 -140384194 - Tigger1 DNA MER2_type 0 2418 2147 436 141 0 0 chr10 5205109 5205173 -140384115 + L1P LINE L1 11 74 -6072 * 3134 55 57 2 chr10 5205172 5205591 -140383697 + L1PA6 LINE L1 3640 4081 -2065 5669 98 108 33 chr10 5205591 5206679 -140382609 - MER11A LTR ERVK 0 1266 1 10244 48 12 0 chr10 5206679 5208581 -140380707 + L1PA6 LINE L1 4076 6003 -151 3352 246 24 12 chr10 5208689 5209693 -140379595 - L1PBb LINE L1 -4144 2705 1598 846 264 129 27 chr10 5209723 5210018 -140379270 - L1PBb LINE L1 -5288 1561 1237 552 28 42 0 chr10 5210018 5210089 -140379199 - pTR5 LTR ERV1 -2286 152 79 351 172 63 81 chr10 5210089 5210200 -140379088 - LTR30 LTR ERV1 -70 724 544 4508 131 77 71 chr10 5210200 5211239 -140378049 - pTR5 LTR ERV1 -413 2025 743 26 0 0 0 chr10 5211539 5211565 -140377723 + AT_rich Low_complexity Low_complexity 1 26 0 36 23 0 0 chr10 5212275 5212318 -140376970 + AT_rich Low_complexity Low_complexity 1 43 0 1254 284 3 0 chr10 5212607 5212913 -140376375 + MST-int LTR MaLR 907 1213 -438 485 260 90 57 chr10 5212913 5213267 -140376021 - L1M4c LINE L1 -5213 1171 806 2886 61 0 0 chr10 5213285 5213629 -140375659 + LTR14A LTR ERVK 1 344 0 9019 77 4 2 chr10 5213629 5214771 -140374517 + HERVK14 LTR ERVK 1 1145 -4800 9785 187 46 30 chr10 5214874 5216933 -140372355 - Tigger1 DNA MER2_type -323 2095 4 1250 268 20 49 chr10 5216973 5217539 -140371749 + MLT2B3 LTR ERVL 1 504 -50 284 151 50 8 chr10 5217596 5217715 -140371573 + (TA)n Simple_repeat Simple_repeat 2 125 0 680 294 48 22 chr10 5217753 5218022 -140371266 + HERVL-B3 LTR ERVL 1 276 -5378 9643 30 4 0 chr10 5218024 5219147 -140370141 - L1P LINE L1 -1187 4959 3833 3099 24 0 3 chr10 5219145 5219521 -140369767 + L1P LINE L1 4984 5358 -788 * 7985 102 44 24 chr10 5219621 5220900 -140368388 - MER4-int LTR ERV1 -1457 5141 3837 342 286 122 7 chr10 5221274 5221334 -140367954 - L1ME4a LINE L1 -8 6113 6061 2690 156 7 23 chr10 5221334 5221770 -140367518 - LTR3 LTR ERVK 0 429 1 342 286 122 7 chr10 5221770 5221856 -140367432 - L1ME4a LINE L1 -60 6061 5950 399 88 118 0 chr10 5221887 5221955 -140367333 - L1PA15 LINE L1 -6 6159 6084 732 134 25 17 chr10 5221955 5222056 -140367232 + L1PA15 LINE L1 6044 6163 -2 1754 243 31 40 chr10 5222073 5222633 -140366655 + L1M4c LINE L1 1338 1901 -4481 2199 114 0 7 chr10 5222633 5222931 -140366357 + AluY SINE Alu 1 296 -15 1754 243 31 40 chr10 5222931 5223321 -140365967 + L1M4c LINE L1 1901 2375 -4007 1468 209 74 15 chr10 5223321 5223646 -140365642 - MER7A DNA MER2_type -1 345 4 1754 243 31 40 chr10 5223646 5223909 -140365379 + L1M4c LINE L1 2375 2639 -3743 1833 203 63 5 chr10 5223911 5224252 -140365036 - Tigger1 DNA MER2_type 0 2418 2051 216 0 0 0 chr10 5224252 5224276 -140365012 + (TAAAA)n Simple_repeat Simple_repeat 1 24 0 1833 203 63 5 chr10 5224276 5224313 -140364975 - Tigger1 DNA MER2_type -367 2051 2018 324 0 0 0 chr10 5224324 5224360 -140364928 + (CA)n Simple_repeat Simple_repeat 2 37 0 267 164 0 36 chr10 5224365 5224399 -140364889 + Ricksha DNA DNA 872 903 -2343 1658 232 95 13 chr10 5224399 5224851 -140364437 + ERVL LTR ERVL 2 490 -5274 490 209 39 39 chr10 5224853 5225006 -140364282 + L1M4 LINE L1 5099 5251 -895 920 185 40 0 chr10 5225488 5225661 -140363627 - AluJo SINE Alu -48 264 85 190 316 158 0 chr10 5226111 5226225 -140363063 - L3 LINE CR1 -85 1492 1361 230 247 124 22 chr10 5227091 5227180 -140362108 - MIR SINE MIR -77 185 88 511 178 22 0 chr10 5228555 5228645 -140360643 + MLT1D LTR MaLR 1 92 -413 765 206 75 45 chr10 5229394 5229661 -140359627 + ORSL DNA AcHobo 1 275 0 2396 94 0 0 chr10 5229710 5230009 -140359279 + AluSg SINE Alu 1 299 -11 263 27 0 27 chr10 5230303 5230340 -140358948 + (CA)n Simple_repeat Simple_repeat 1 36 0 461 171 0 0 chr10 5230345 5230415 -140358873 - MER8 DNA MER2_type 0 239 170 * 2077 124 14 40 chr10 5230404 5230758 -140358530 + Tigger2 DNA MER2_type 2273 2617 -101 22 0 0 0 chr10 5231674 5231696 -140357592 + AT_rich Low_complexity Low_complexity 1 22 0 193 268 18 0 chr10 5231709 5231765 -140357523 + MIR SINE MIR 154 210 -52 6708 93 13 3 chr10 5232313 5233296 -140355992 + L1PA12 LINE L1 5174 6168 0 1997 37 0 12 chr10 5233590 5233831 -140355457 - AluY SINE Alu 0 311 74 299 330 103 29 chr10 5234101 5234413 -140354875 - L3 LINE CR1 -614 963 629 1878 220 20 18 chr10 5235092 5235487 -140353801 + MSTD LTR MaLR 1 396 0 1481 211 14 31 chr10 5235687 5235913 -140353375 - MLT1A1 LTR MaLR -5 360 141 2431 163 48 5 chr10 5235913 5236325 -140352963 + MSTB1 LTR MaLR 1 430 -2 1481 211 14 31 chr10 5236325 5236453 -140352835 - MLT1A1 LTR MaLR -224 141 12 372 290 138 41 chr10 5236758 5237048 -140352240 + L2 LINE L2 2995 3312 -1 2414 35 0 18 chr10 5238228 5238541 -140350747 - AluY SINE Alu 0 308 1 1985 189 35 10 chr10 5238695 5239096 -140350192 - MSTB LTR MaLR -15 411 1 1433 109 104 0 chr10 5239577 5239798 -140349490 + L1M2 LINE L1 5562 5805 -495 367 226 21 0 chr10 5239786 5239879 -140349409 - L1 LINE L1 -1762 4384 4290 * 328 280 200 0 chr10 5239938 5240063 -140349225 + MLT1I LTR MaLR 249 398 -11 735 186 87 6 chr10 5240774 5240935 -140348353 + MER104 DNA Tc2 1 174 -6 542 167 83 19 chr10 5240961 5241069 -140348219 + MLT1C LTR MaLR 350 464 -3 516 271 0 0 chr10 5241906 5242076 -140347212 + (CA)n Simple_repeat Simple_repeat 2 171 0 2349 81 10 0 chr10 5242088 5242384 -140346904 - AluSq SINE Alu -14 299 1 2285 185 19 56 chr10 5242386 5242921 -140346367 + MLT2B1 LTR ERVL 6 520 0 2439 55 0 7 chr10 5243809 5244137 -140345151 - AluY SINE Alu 0 311 1 1970 147 0 10 chr10 5244151 5244443 -140344845 - AluJo SINE Alu -23 289 1 744 241 0 0 chr10 5246172 5246305 -140342983 - FLAM_A SINE Alu 0 133 1 1066 90 0 0 chr10 5246312 5246445 -140342843 - AluSg/x SINE Alu -16 294 162 587 165 0 0 chr10 5246447 5246532 -140342756 + AluJb SINE Alu 199 283 -29 1443 204 25 0 chr10 5247191 5247465 -140341823 + AluJb SINE Alu 1 281 -31 366 250 23 0 chr10 5248178 5248266 -140341022 + L1MC4 LINE L1 6614 6703 -1339 222 118 0 0 chr10 5248269 5248303 -140340985 + (TA)n Simple_repeat Simple_repeat 1 34 0 1786 146 3 14 chr10 5248303 5248590 -140340698 - AluSx SINE Alu -19 293 10 373 287 9 0 chr10 5249203 5249311 -140339977 + (CA)n Simple_repeat Simple_repeat 1 109 0 363 304 20 54 chr10 5250596 5250744 -140338544 - MIR3 SINE MIR -31 177 35 1964 125 6 19 chr10 5251190 5251503 -140337785 - THE1B LTR MaLR 0 364 56 214 324 0 14 chr10 5451533 5451604 -140137684 - L2 LINE L2 -679 2635 2566 1187 128 3 78 chr10 5451704 5452010 -140137278 - AluSx SINE Alu -19 293 11 380 250 59 52 chr10 5454296 5454432 -140134856 - MER63 DNA MER1_type -73 763 1 208 278 19 0 chr10 5454464 5454518 -140134770 - L2 LINE L2 -244 3069 3015 242 274 21 21 chr10 5454742 5454837 -140134451 + CT-rich Low_complexity Low_complexity 5 99 0 24 0 0 0 chr10 5455012 5455036 -140134252 + GC_rich Low_complexity Low_complexity 1 24 0 969 163 102 0 chr10 5455595 5455791 -140133497 + AluJo SINE Alu 87 302 -10 388 17 0 52 chr10 5456690 5456748 -140132540 - L1PA3 LINE L1 0 6155 6101 212 186 17 0 chr10 5457616 5457675 -140131613 + CT-rich Low_complexity Low_complexity 2 61 0 27 0 0 0 chr10 5457829 5457856 -140131432 + AT_rich Low_complexity Low_complexity 1 27 0 573 282 60 13 chr10 5457909 5458058 -140131230 - MIR SINE MIR -50 212 57 241 241 56 0 chr10 5458088 5458142 -140131146 - MIR SINE MIR -188 74 18 589 192 75 0 chr10 5459441 5459561 -140129727 + FLAM_A SINE Alu 8 136 -6 242 297 0 0 chr10 5459756 5459820 -140129468 - L2 LINE L2 -21 3292 3229 185 275 94 56 chr10 5459901 5460061 -140129227 + MIR SINE MIR 97 262 0 198 0 0 0 chr10 5460231 5460253 -140129035 + (T)n Simple_repeat Simple_repeat 1 22 0 31 0 0 0 chr10 5463118 5463149 -140126139 + AT_rich Low_complexity Low_complexity 1 31 0 189 0 0 0 chr10 5463547 5463568 -140125720 + (ATTG)n Simple_repeat Simple_repeat 3 23 0 1933 118 3 10 chr10 5464600 5464905 -140124383 - AluSc SINE Alu -1 308 6 1298 290 94 51 chr10 5465249 5466802 -140122486 - L1MEd LINE L1 -4641 1669 3 2680 226 79 50 chr10 5466992 5467712 -140121576 + L1M4b LINE L1 28 768 -6091 468 0 0 0 chr10 5469545 5469597 -140119691 + (CA)n Simple_repeat Simple_repeat 2 53 0 552 200 18 0 chr10 5470267 5470437 -140118851 + (TCCA)n Simple_repeat Simple_repeat 3 175 0 676 173 37 10 chr10 5470482 5470872 -140118416 + (TCCA)n Simple_repeat Simple_repeat 1 400 0 315 185 65 19 chr10 5470877 5470985 -140118303 + (CCCA)n Simple_repeat Simple_repeat 1 113 0 259 274 14 0 chr10 5471456 5471529 -140117759 + (CCCA)n Simple_repeat Simple_repeat 1 74 0 2031 121 7 0 chr10 5472511 5472808 -140116480 - AluSx SINE Alu -13 299 1 572 252 28 110 chr10 5476403 5476621 -140112667 - MIR SINE MIR -17 245 46 243 0 0 0 chr10 5476925 5476952 -140112336 + (A)n Simple_repeat Simple_repeat 1 27 0 2973 199 48 76 chr10 5477241 5478163 -140111125 + L1M4b LINE L1 743 1638 -5221 1756 238 70 9 chr10 5478525 5479085 -140110203 + L1M4b LINE L1 1616 2209 -4750 385 125 87 96 chr10 5479496 5479600 -140109688 - AluJ/FLAM SINE Alu -243 59 2 311 184 31 20 chr10 5482158 5482256 -140107032 + (TCCA)n Simple_repeat Simple_repeat 3 101 0 281 294 0 43 chr10 5482256 5482348 -140106940 - L2 LINE L2 0 3272 3185 811 177 0 0 chr10 5482645 5482775 -140106513 + FLAM_A SINE Alu 1 130 -3 561 306 44 20 chr10 5482882 5483125 -140106163 + MIR SINE MIR 3 248 -14 205 293 65 41 chr10 5483197 5483320 -140105968 - MIR SINE MIR -33 229 104 243 151 19 38 chr10 5483535 5483588 -140105700 + GA-rich Low_complexity Low_complexity 4 55 0 1518 147 66 7 chr10 5483963 5484235 -140105053 - AluJb SINE Alu -24 288 1 233 280 20 0 chr10 5484833 5484883 -140104405 + MER58A DNA MER1_type 1 51 -173 404 168 0 10 chr10 5484890 5484958 -140104330 - FLAM_A SINE Alu -11 122 66 343 140 0 18 chr10 5485115 5485172 -140104116 - FLAM_A SINE Alu -71 61 6 758 233 61 17 chr10 5485173 5485353 -140103935 + MER58A DNA MER1_type 37 224 0 281 167 0 0 chr10 5485362 5485410 -140103878 + L2 LINE L2 3263 3310 -3 237 162 0 0 chr10 5485463 5485500 -140103788 - MLT1A1 LTR MaLR 0 365 329 969 150 6 50 chr10 5485500 5485680 -140103608 + FAM SINE Alu 1 172 -13 1455 205 33 45 chr10 5485680 5486017 -140103271 - MLT1A1 LTR MaLR -32 333 1 376 292 116 13 chr10 5486233 5486404 -140102884 - MIR SINE MIR -43 165 2 194 291 50 92 chr10 5486701 5486842 -140102446 - MIR3 SINE MIR -71 137 3 2185 117 0 9 chr10 5486869 5487185 -140102103 - AluSq SINE Alu 0 313 1 411 213 11 21 chr10 5487396 5487490 -140101798 - MER5B DNA MER1_type -85 93 1 230 211 0 58 chr10 5487490 5487525 -140101763 - MIR3 SINE MIR -51 157 126 409 285 18 34 chr10 5488809 5488992 -140100296 - MIR SINE MIR -79 129 8 22 0 0 0 chr10 5489737 5489759 -140099529 + AT_rich Low_complexity Low_complexity 1 22 0 727 286 64 58 chr10 5491173 5491664 -140097624 + L1MC5 LINE L1 6414 6884 -924 189 94 0 0 chr10 5491753 5491785 -140097503 + (TTCC)n Simple_repeat Simple_repeat 4 35 0 1589 173 22 0 chr10 5491786 5492063 -140097225 - AluJo SINE Alu -21 291 9 8435 236 32 18 chr10 5492072 5492356 -140096932 - L1MCa LINE L1 -1509 4917 4638 1746 104 8 4 chr10 5492356 5492605 -140096683 - AluSg SINE Alu -14 296 47 8435 236 32 18 chr10 5492605 5494678 -140094610 - L1MCa LINE L1 -1788 4638 2517 3219 144 19 0 chr10 5494678 5495193 -140094095 + L1PA16 LINE L1 5642 6166 0 8435 236 32 18 chr10 5495193 5495437 -140093851 - L1MCa LINE L1 -3909 2517 2278 2347 163 29 51 chr10 5495441 5495696 -140093592 - L1MCa LINE L1 -4234 2192 1933 2075 110 7 3 chr10 5495696 5495987 -140093301 + AluSq SINE Alu 1 292 -21 2347 163 29 51 chr10 5495987 5496006 -140093282 - L1MCa LINE L1 -4493 1933 1915 2067 117 0 13 chr10 5496006 5496305 -140092983 + AluSq SINE Alu 1 295 -18 2347 163 29 51 chr10 5496305 5496520 -140092768 - L1MCa LINE L1 -4511 1915 1713 488 172 20 0 chr10 5496514 5496613 -140092675 - L1MCa LINE L1 -5381 1045 945 * 1722 115 33 62 chr10 5496614 5496918 -140092370 - AluSq SINE Alu -13 300 6 1300 142 0 13 chr10 5497065 5497297 -140091991 + AluSq SINE Alu 85 313 0 4022 143 9 6 chr10 5498309 5498960 -140090328 + MER39B LTR ERV1 1 653 0 2139 77 46 82 chr10 5499253 5499481 -140089807 + L1MA2 LINE L1 5927 6137 -167 2002 131 3 0 chr10 5499481 5499772 -140089516 + AluSx SINE Alu 1 292 -20 2139 77 46 82 chr10 5499772 5499935 -140089353 + L1MA2 LINE L1 6137 6304 0 2217 128 32 11 chr10 5500027 5500403 -140088885 - MLT1B LTR MaLR -4 386 3 1797 134 44 103 chr10 5500446 5500654 -140088634 - THE1B LTR MaLR 0 364 188 2187 119 0 0 chr10 5500654 5500966 -140088322 + AluSq SINE Alu 1 312 -1 1797 134 44 103 chr10 5500966 5501144 -140088144 - THE1B LTR MaLR -176 188 1 222 322 76 66 chr10 5501244 5501533 -140087755 - L2 LINE L2 -561 2753 2462 296 354 39 8 chr10 5501769 5501896 -140087392 + MIR SINE MIR 99 229 -33 227 243 13 13 chr10 5503948 5504040 -140085248 - MIR SINE MIR -61 147 93 1595 199 112 23 chr10 5504565 5504641 -140084647 + MLT1D LTR MaLR 29 97 -408 2253 114 75 41 chr10 5504641 5505053 -140084235 + MSTC LTR MaLR 1 426 -2 1595 199 112 23 chr10 5505053 5505412 -140083876 + MLT1D LTR MaLR 97 503 -2 378 210 25 0 chr10 5505545 5505626 -140083662 - MIR SINE MIR -151 111 29 180 376 30 20 chr10 5505746 5505847 -140083441 + MIR SINE MIR 59 160 -102 445 311 202 8 chr10 5506118 5506475 -140082813 + L3 LINE CR1 1122 1547 -30 312 282 36 0 chr10 5507020 5507130 -140082158 + MER5A DNA MER1_type 74 187 -2 295 263 116 11 chr10 5508330 5508425 -140080863 - MIR SINE MIR 0 262 158 259 218 218 11 chr10 5510869 5510956 -140078332 - L2 LINE L2 -269 3044 2940 416 60 15 60 chr10 5511061 5511128 -140078160 + Alu SINE Alu 232 295 -17 21 36 0 0 chr10 5511854 5511882 -140077406 + AT_rich Low_complexity Low_complexity 1 28 0 419 177 0 0 chr10 5514358 5514437 -140074851 + LTR41 LTR ERVL 57 135 -638 2384 113 0 3 chr10 5514948 5515257 -140074031 + AluSx SINE Alu 1 308 -4 1964 152 11 55 chr10 5516164 5516332 -140072956 + MLT1A1 LTR MaLR 1 175 -190 2427 97 0 3 chr10 5516332 5516642 -140072646 + AluSx SINE Alu 1 309 -3 1964 152 11 55 chr10 5516642 5516855 -140072433 + MLT1A1 LTR MaLR 175 365 0 337 265 32 91 chr10 5516865 5517084 -140072204 - MLT1L LTR MaLR -194 391 112 2194 105 9 6 chr10 5517216 5517547 -140071741 + THE1B LTR MaLR 1 427 -30 691 175 0 113 chr10 5517557 5517717 -140071571 + Tigger1 DNA MER2_type 1 142 -2276 1085 184 14 0 chr10 5517738 5517945 -140071343 + Tigger1 DNA MER2_type 2209 2418 0 423 0 0 0 chr10 5519663 5519710 -140069578 + (TG)n Simple_repeat Simple_repeat 2 48 0 227 244 167 58 chr10 5519889 5520045 -140069243 + MER115 DNA AcHobo 140 312 -381 187 335 238 19 chr10 5520515 5521553 -140067735 - L2 LINE L2 -442 2872 1608 299 327 121 18 chr10 5521774 5521939 -140067349 - MIR3 SINE MIR -23 185 4 222 355 59 67 chr10 5522746 5523137 -140066151 - L2 LINE L2 -32 3240 2853 2413 85 0 19 chr10 5523140 5523457 -140065831 - AluY SINE Alu 0 311 1 929 209 29 9 chr10 5526626 5526836 -140062452 + MER41B LTR ERV1 422 635 0 238 291 90 0 chr10 5526909 5527031 -140062257 - MIR SINE MIR -66 142 19 2535 113 53 5 chr10 5527190 5527605 -140061683 + LTR49 LTR ERV1 1 435 -160 775 168 81 23 chr10 5527996 5528169 -140061119 + LTR49 LTR ERV1 413 595 0 183 268 71 0 chr10 5528320 5528376 -140060912 - L2 LINE L2 -5 3308 3249 2243 116 0 3 chr10 5528504 5528805 -140060483 + AluSx SINE Alu 1 300 -12 1401 132 182 23 chr10 5528867 5529125 -140060163 + AluJb SINE Alu 2 300 -2 2360 121 0 0 chr10 5529772 5530085 -140059203 - AluSq SINE Alu 0 313 1 1662 178 3 39 chr10 5530087 5530396 -140058892 - AluJb SINE Alu -9 303 6 2265 131 0 0 chr10 5530566 5530878 -140058410 - AluSx SINE Alu 0 312 1 636 293 120 10 chr10 5530933 5531117 -140058171 + L2 LINE L2 2044 2206 -1108 1745 189 7 0 chr10 5531117 5531413 -140057875 - AluJo SINE Alu -14 298 1 636 293 120 10 chr10 5531413 5531528 -140057760 + L2 LINE L2 2206 2376 -938 1019 128 7 0 chr10 5531541 5531682 -140057606 + AluSq/x SINE Alu 1 142 -171 1614 135 8 4 chr10 5531816 5532061 -140057227 + AluSg/x SINE Alu 66 311 -1 2059 152 3 18 chr10 5532230 5532572 -140056716 - MER1B DNA MER1_type 0 337 1 21 0 0 0 chr10 5532848 5532869 -140056419 + AT_rich Low_complexity Low_complexity 1 21 0 685 328 109 40 chr10 5533166 5533562 -140055726 + L3 LINE CR1 73 495 -1082 300 247 43 54 chr10 5533635 5533728 -140055560 - L2 LINE L2 -2 3311 3220 334 267 81 34 chr10 5533755 5533958 -140055330 + MIR SINE MIR 18 236 -26 798 325 153 13 chr10 5534069 5534592 -140054696 + L3 LINE CR1 768 1363 -214 188 61 61 0 chr10 5538067 5538100 -140051188 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 216 97 0 0 chr10 5538920 5538951 -140050337 + (GA)n Simple_repeat Simple_repeat 2 32 0 24 32 0 0 chr10 5539386 5539417 -140049871 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr10 5539782 5539803 -140049485 + AT_rich Low_complexity Low_complexity 1 21 0 203 243 225 45 chr10 5541724 5541835 -140047453 + MIR3 SINE MIR 68 198 -10 229 155 31 103 chr10 5543300 5543397 -140045891 + L2 LINE L2 1636 1725 -1589 1968 145 0 38 chr10 5543410 5543727 -140045561 - AluSx SINE Alu -7 305 1 189 301 108 60 chr10 5544556 5544722 -140044566 + L2 LINE L2 2968 3141 -131 475 261 34 8 chr10 5546081 5546200 -140043088 + L2 LINE L2 3191 3312 -1 2073 125 3 0 chr10 5546492 5546789 -140042499 - AluSg SINE Alu -12 298 1 745 149 51 93 chr10 5548370 5548445 -140040843 + ORSL DNA AcHobo 42 119 -156 1764 132 106 0 chr10 5548445 5548710 -140040578 - AluSx SINE Alu -19 293 1 745 149 51 93 chr10 5548710 5548848 -140040440 + ORSL DNA AcHobo 119 246 -29 709 249 24 6 chr10 5548882 5549047 -140040241 + MER5B DNA MER1_type 8 175 -3 2134 143 13 28 chr10 5549342 5549389 -140039899 - L1MB3 LINE L1 -28 6155 6109 2369 125 37 6 chr10 5549389 5549742 -140039546 + THE1B LTR MaLR 1 364 0 2134 143 13 28 chr10 5549742 5550087 -140039201 - L1MB3 LINE L1 -74 6109 5769 291 268 42 0 chr10 5550093 5550164 -140039124 + L2 LINE L2 3216 3289 -24 1803 195 0 0 chr10 5550688 5550985 -140038303 - AluJo SINE Alu -8 304 8 892 201 6 11 chr10 5551042 5551221 -140038067 - AluJo SINE Alu -91 221 44 201 209 47 0 chr10 5552080 5552123 -140037165 + (CATG)n Simple_repeat Simple_repeat 3 47 0 24 0 0 0 chr10 5552204 5552228 -140037060 + AT_rich Low_complexity Low_complexity 1 24 0 3422 176 39 41 chr10 5552895 5553514 -140035774 + L1 LINE L1 4513 5130 -1038 2171 133 0 0 chr10 5553514 5553799 -140035489 + AluSx SINE Alu 1 315 0 222 0 0 33 chr10 5553799 5553829 -140035459 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 3422 176 39 41 chr10 5553829 5554126 -140035162 + L1 LINE L1 5130 5426 -742 300 235 0 29 chr10 5554128 5554196 -140035092 - L1ME LINE L1 -287 5834 5769 633 221 61 22 chr10 5554206 5554387 -140034901 + LTR41 LTR ERVL 1 188 -585 252 265 8 51 chr10 5554798 5554915 -140034373 + LTR41 LTR ERVL 656 767 -6 1176 100 0 0 chr10 5555114 5555264 -140034024 - AluSg/x SINE Alu -9 301 152 303 327 73 27 chr10 5555274 5555424 -140033864 - MIR SINE MIR -63 199 43 560 256 122 99 chr10 5555942 5556147 -140033141 + MLT1J LTR MaLR 6 205 -306 2475 86 3 0 chr10 5556147 5556448 -140032840 - AluSg SINE Alu -8 302 1 560 256 122 99 chr10 5556448 5556735 -140032553 + MLT1J LTR MaLR 205 509 -2 430 278 28 45 chr10 5556779 5556955 -140032333 + MIR SINE MIR 35 207 -55 366 234 170 18 chr10 5557388 5557559 -140031729 + MIR SINE MIR 44 240 -22 3339 171 20 12 chr10 5557564 5557880 -140031408 + L1MCa LINE L1 202 514 -5912 1662 151 80 37 chr10 5557880 5557927 -140031361 + MER47A DNA MER2_type 1 45 -2278 2309 112 0 13 chr10 5557927 5558241 -140031047 - AluSx SINE Alu -2 310 1 1662 151 80 37 chr10 5558241 5558544 -140030744 + MER47A DNA MER2_type 45 366 0 3339 171 20 12 chr10 5558544 5558876 -140030412 + L1MCa LINE L1 514 855 -5571 474 268 140 0 chr10 5559058 5559222 -140030066 + MIR SINE MIR 2 188 -74 305 349 0 0 chr10 5559324 5559433 -140029855 - MIR SINE MIR -69 139 31 2355 106 0 6 chr10 5559530 5559842 -140029446 - AluSg SINE Alu 0 310 1 1056 23 78 0 chr10 5560361 5560489 -140028799 - MER85 DNA T2_type -1 138 1 248 265 15 0 chr10 5560656 5560724 -140028564 + MIR SINE MIR 76 144 -64 233 306 54 18 chr10 5560996 5561107 -140028181 - L2 LINE L2 -509 2805 2691 393 244 0 0 chr10 5561963 5562041 -140027247 + MER21B LTR ERV1 13 90 -773 1803 216 91 93 chr10 5562063 5562300 -140026988 + MER21B LTR ERV1 19 255 -608 1464 200 11 0 chr10 5562300 5562565 -140026723 + AluJb SINE Alu 16 283 -29 1803 216 91 93 chr10 5562565 5563104 -140026184 + MER21B LTR ERV1 255 794 -69 250 337 125 16 chr10 5563271 5563455 -140025833 + L3 LINE CR1 1303 1506 -71 346 300 36 36 chr10 5563514 5563654 -140025634 + MIR3 SINE MIR 42 181 -27 1837 183 7 13 chr10 5563654 5563954 -140025334 - AluJb SINE Alu -14 298 1 1193 192 9 18 chr10 5565306 5565525 -140023763 - AluJo SINE Alu -95 217 1 1518 204 47 6 chr10 5565553 5565892 -140023396 - MLT1A1 LTR MaLR 0 365 13 2211 130 33 25 chr10 5566640 5567001 -140022287 - THE1B LTR MaLR 0 364 1 216 235 0 0 chr10 5569359 5569427 -140019861 + CT-rich Low_complexity Low_complexity 1 68 0 352 336 22 0 chr10 5570247 5570381 -140018907 - MIR3 SINE MIR -52 156 20 346 179 64 0 chr10 5570652 5570730 -140018558 - Charlie5 DNA MER1_type -2503 109 27 183 100 0 0 chr10 5571817 5571847 -140017441 + (A)n Simple_repeat Simple_repeat 1 30 0 2018 104 4 0 chr10 5573195 5573464 -140015824 - AluSc SINE Alu -39 270 1 22 0 0 0 chr10 5575487 5575509 -140013779 + AT_rich Low_complexity Low_complexity 1 22 0 527 184 0 10 chr10 5576772 5576870 -140012418 + FLAM_A SINE Alu 35 131 -11 243 0 0 0 chr10 5577421 5577448 -140011840 + (T)n Simple_repeat Simple_repeat 1 27 0 1262 169 21 104 chr10 5580495 5580750 -140008538 + MER66A-int LTR ERV1 3224 3499 -3177 2486 113 19 19 chr10 5580750 5581114 -140008174 + THE1B LTR MaLR 1 364 0 1262 169 21 104 chr10 5581114 5581481 -140007807 + MER66A-int LTR ERV1 3499 4437 -2239 462 194 78 10 chr10 5581481 5581584 -140007704 + MER4D LTR ERV1 52 161 -711 957 180 71 38 chr10 5581672 5581883 -140007405 + MER66A-int LTR ERV1 4611 4828 -1848 1916 158 11 29 chr10 5581977 5582042 -140007246 + MER66A-int LTR ERV1 6334 6399 -277 2358 95 7 0 chr10 5582042 5582338 -140006950 - AluSp SINE Alu -12 301 4 1916 158 11 29 chr10 5582338 5582621 -140006667 + MER66A-int LTR ERV1 6399 6676 0 1131 201 139 37 chr10 5582659 5583048 -140006240 + MER66A LTR ERV1 97 428 -50 452 173 109 18 chr10 5583365 5583475 -140005813 + MER53 DNA DNA 1 120 -69 328 206 244 23 chr10 5583381 5583512 -140005776 - MER53 DNA DNA -7 182 23 * 312 255 60 87 chr10 5584652 5584836 -140004452 + MIR SINE MIR 68 246 -16 186 231 0 92 chr10 5585574 5585639 -140003649 - L3 LINE CR1 -710 867 809 528 204 148 28 chr10 5587140 5587282 -140002006 - MIR SINE MIR -91 171 13 205 302 94 19 chr10 5588572 5588678 -140000610 + L2 LINE L2 3200 3313 0 449 248 50 8 chr10 5589358 5589479 -139999809 - L2 LINE L2 -11 3261 3136 576 266 130 11 chr10 5590409 5590593 -139998695 - MIR SINE MIR -53 209 4 6400 24 0 0 chr10 5594579 5595556 -139993732 - L1PA3 LINE L1 -141 6014 5038 2079 154 59 77 chr10 5595731 5596005 -139993283 - MER31A LTR ERV1 0 485 222 3421 121 31 13 chr10 5596005 5596558 -139992730 - L1MA2 LINE L1 -1 6303 5741 2079 154 59 77 chr10 5596558 5596777 -139992511 - MER31A LTR ERV1 -263 222 1 331 325 36 24 chr10 5597992 5598158 -139991130 + (CATG)n Simple_repeat Simple_repeat 1 168 0 * 379 385 0 6 chr10 5598050 5598229 -139991059 + (CA)n Simple_repeat Simple_repeat 1 178 0 416 363 18 6 chr10 5598894 5599062 -139990226 - MIR SINE MIR -69 193 24 532 227 81 86 chr10 5599199 5599903 -139989385 + L1MC5 LINE L1 6780 7670 -291 2256 118 0 0 chr10 5599903 5600199 -139989089 - AluSx SINE Alu -15 297 2 532 227 81 86 chr10 5600199 5600430 -139988858 + L1MC5 LINE L1 7670 7901 -60 316 224 17 60 chr10 5600723 5600839 -139988449 + L2 LINE L2 2985 3095 -177 256 241 218 30 chr10 5602476 5602609 -139986679 - MIR3 SINE MIR -41 167 10 214 167 0 0 chr10 5604065 5604101 -139985187 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 201 0 100 0 chr10 5604304 5604334 -139984954 + T-rich Low_complexity Low_complexity 3 180 0 1990 126 7 10 chr10 5604334 5604628 -139984660 - AluSx SINE Alu -1 331 10 5132 102 10 0 chr10 5604628 5605340 -139983948 - LTR30 LTR ERV1 -2 720 2 674 301 74 7 chr10 5606495 5606900 -139982388 + L1M4 LINE L1 3344 3775 -2371 388 308 61 35 chr10 5607655 5607853 -139981435 + MIR3 SINE MIR 3 205 -3 859 202 12 6 chr10 5614611 5614784 -139974504 + FAM SINE Alu 1 174 -1 351 0 0 0 chr10 5616496 5616535 -139972753 + (TAA)n Simple_repeat Simple_repeat 2 40 0 23 33 0 0 chr10 5616993 5617023 -139972265 + AT_rich Low_complexity Low_complexity 1 30 0 204 67 0 0 chr10 5622906 5622936 -139966352 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 4109 148 21 83 chr10 5625504 5625831 -139963457 - LTR39 LTR ERV1 -29 754 408 2092 109 0 6 chr10 5625831 5626142 -139963146 + AluSx SINE Alu 1 309 -3 4109 148 21 83 chr10 5626142 5626534 -139962754 - LTR39 LTR ERV1 -375 408 88 2016 116 7 3 chr10 5626534 5626828 -139962460 - AluSx SINE Alu -17 295 1 4109 148 21 83 chr10 5626828 5626911 -139962377 - LTR39 LTR ERV1 -695 88 1 1982 121 0 7 chr10 5627786 5628075 -139961213 + AluSx SINE Alu 1 287 -25 253 205 110 16 chr10 5629028 5629140 -139960148 - L1ME4a LINE L1 -84 6025 1141 1957 159 43 0 chr10 5629178 5629504 -139959784 + MER47A DNA MER2_type 27 366 0 295 289 112 48 chr10 5629508 5629658 -139959630 - L1ME4a LINE L1 -223 5898 5732 1914 119 3 17 chr10 5629658 5629952 -139959336 - AluSx SINE Alu -22 290 1 295 289 112 48 chr10 5629952 5629988 -139959300 - L1ME4a LINE L1 -389 5732 5700 216 111 0 0 chr10 5630067 5630103 -139959185 + (TTCC)n Simple_repeat Simple_repeat 2 37 0 272 243 119 89 chr10 5630128 5630330 -139958958 - MLT1J LTR MaLR -103 408 201 2104 179 6 6 chr10 5631484 5631847 -139957441 - MLT1A1 LTR MaLR 0 365 3 1842 193 63 30 chr10 5632239 5632665 -139956623 - L1MD1 LINE L1 0 6242 5803 233 298 134 72 chr10 5632665 5632927 -139956361 + L2 LINE L2 2688 2965 -349 504 287 126 18 chr10 5632931 5633154 -139956134 - MIR SINE MIR 0 262 16 1524 163 62 24 chr10 5633486 5633774 -139955514 - AluJo SINE Alu -13 299 1 256 286 37 55 chr10 5633788 5633879 -139955409 - L1MD1 LINE L1 -382 5739 5648 2126 116 0 0 chr10 5633879 5634180 -139955108 - AluSx SINE Alu -11 301 1 256 286 37 55 chr10 5634180 5634324 -139954964 - L1MD1 LINE L1 -473 5648 5506 816 188 0 7 chr10 5634385 5634529 -139954759 + MLT1D LTR MaLR 363 505 0 26 0 0 0 chr10 5634790 5634816 -139954472 + AT_rich Low_complexity Low_complexity 1 26 0 198 323 62 21 chr10 5635765 5635861 -139953427 + L2 LINE L2 3199 3298 -15 1987 146 0 3 chr10 5636003 5636312 -139952976 + AluSx SINE Alu 1 308 -4 378 42 0 0 chr10 5636702 5636750 -139952538 + (CA)n Simple_repeat Simple_repeat 2 49 0 611 152 163 20 chr10 5637156 5637328 -139951960 - MER66A LTR ERV1 -261 341 97 239 250 0 0 chr10 5637669 5637721 -139951567 - MIR SINE MIR -139 123 72 1555 178 93 77 chr10 5637946 5638413 -139950875 + MER66A LTR ERV1 97 478 0 7682 198 71 44 chr10 5638589 5639096 -139950192 + MER66A-int LTR ERV1 197 689 -5987 1530 172 59 0 chr10 5639096 5639369 -139949919 - AluSg SINE Alu -21 289 1 7682 198 71 44 chr10 5639369 5640236 -139949052 + MER66A-int LTR ERV1 689 1635 -5041 1572 171 20 7 chr10 5640236 5640529 -139948759 + AluJo SINE Alu 1 297 -15 7682 198 71 44 chr10 5640529 5641021 -139948267 + MER66A-int LTR ERV1 1635 2113 -4563 4374 211 39 19 chr10 5641131 5642020 -139947268 + MER66A-int LTR ERV1 2342 3248 -3428 318 176 0 40 chr10 5642010 5642084 -139947204 + LTR38-int LTR ERV1 1407 1477 -309 * 21 36 0 0 chr10 5642127 5642155 -139947133 + AT_rich Low_complexity Low_complexity 1 28 0 305 279 56 50 chr10 5742611 5742790 -139846498 + MIR3 SINE MIR 23 202 -6 696 127 0 0 chr10 5743950 5744060 -139845228 + (CA)n Simple_repeat Simple_repeat 1 110 0 572 210 25 0 chr10 5745292 5745537 -139843751 + GA-rich Low_complexity Low_complexity 1 251 0 253 239 72 0 chr10 5745642 5745741 -139843547 - L1ME LINE L1 -516 5605 5497 436 192 67 50 chr10 5746220 5746340 -139842948 - MER20 DNA MER1_type -50 169 48 192 139 116 0 chr10 5746463 5746506 -139842782 - L2 LINE L2 0 3272 3225 1463 166 101 18 chr10 5748638 5748915 -139840373 - AluJb SINE Alu -12 300 1 1756 99 0 0 chr10 5748935 5749158 -139840130 - AluSx SINE Alu -89 223 1 566 154 135 58 chr10 5749174 5749330 -139839958 - MER2 DNA MER2_type -135 210 43 237 196 43 43 chr10 5750146 5750238 -139839050 - L1ME4a LINE L1 -74 6047 5956 1423 132 194 3 chr10 5750591 5750879 -139838409 + MER7A DNA MER2_type 5 345 -1 323 261 137 6 chr10 5751181 5751342 -139837946 + MIR SINE MIR 44 225 -37 1748 157 15 0 chr10 5752364 5752638 -139836650 - AluJo SINE Alu -21 291 14 239 288 41 62 chr10 5754506 5754652 -139834636 - MARNA DNA Mariner -24 562 420 1437 198 16 39 chr10 5754899 5755207 -139834081 - AluJo SINE Alu -11 301 1 2115 108 0 3 chr10 5755326 5755612 -139833676 - AluSx SINE Alu -20 292 8 2643 45 0 13 chr10 5755835 5756148 -139833140 - AluY SINE Alu -2 309 1 316 118 0 0 chr10 5756381 5756432 -139832856 + Alu SINE Alu 251 301 -1 611 201 30 0 chr10 5756440 5756574 -139832714 - L1MB5 LINE L1 -46 6128 5991 212 296 34 0 chr10 5756585 5756673 -139832615 - L2 LINE L2 -34 3238 3148 2101 88 50 0 chr10 5756743 5757026 -139832262 + AluSg SINE Alu 1 297 -13 490 309 0 8 chr10 5757066 5757192 -139832096 - MIR SINE MIR -91 171 47 1110 198 64 28 chr10 5757194 5757358 -139831930 - L1MB5 LINE L1 -189 5985 5828 2335 68 20 0 chr10 5757358 5757650 -139831638 - AluY SINE Alu -13 298 1 1110 198 64 28 chr10 5757650 5757847 -139831441 - L1MB5 LINE L1 -346 5828 5611 1032 199 38 4 chr10 5757847 5758083 -139831205 - AluJb SINE Alu -5 307 64 2082 126 0 11 chr10 5758204 5758524 -139830764 + AluSx SINE Alu 1 317 0 730 201 65 15 chr10 5758608 5758844 -139830444 + MLT1G LTR MaLR 247 590 0 22 0 0 0 chr10 5758965 5758987 -139830301 + AT_rich Low_complexity Low_complexity 1 22 0 2275 99 20 0 chr10 5758992 5759295 -139829993 + AluSq SINE Alu 1 309 -4 1694 121 16 39 chr10 5759309 5759565 -139829723 + AluSx SINE Alu 3 252 -60 286 118 0 0 chr10 5759739 5759790 -139829498 + AluSx SINE Alu 251 301 0 297 308 55 55 chr10 5760054 5760366 -139828922 - L1ME LINE L1 -5652 418 107 1708 183 7 0 chr10 5760393 5760672 -139828616 - AluJb SINE Alu -23 289 9 1145 151 5 15 chr10 5760805 5761004 -139828284 - MER50-int LTR ERV1 -6724 481 285 215 269 0 0 chr10 5761180 5761232 -139828056 + L2 LINE L2 2599 2650 -664 2453 85 3 0 chr10 5761232 5761537 -139827751 - AluSp SINE Alu -7 306 1 2103 127 6 16 chr10 5761545 5761860 -139827428 - AluSx SINE Alu 0 312 1 215 270 132 78 chr10 5762013 5762217 -139827071 + L2 LINE L2 2856 3070 -243 633 165 1 46 chr10 5762223 5762368 -139826920 + L1MA6 LINE L1 5823 5956 -210 2368 97 0 0 chr10 5762373 5762663 -139826625 + AluSg SINE Alu 18 307 -3 436 190 123 43 chr10 5763566 5763819 -139825469 + L1ME LINE L1 530 802 -5268 2167 103 13 0 chr10 5763917 5764217 -139825071 + AluSc SINE Alu 1 304 -5 250 115 97 0 chr10 5764217 5764276 -139825012 + AluSg/x SINE Alu 132 189 -111 2338 233 88 63 chr10 5764482 5765535 -139823753 + L1M4 LINE L1 4005 5030 -1116 2281 91 7 0 chr10 5765535 5765833 -139823455 + AluY SINE Alu 1 300 -11 2338 233 88 63 chr10 5765833 5765921 -139823367 + L1M4 LINE L1 5030 5114 -1032 2042 134 7 3 chr10 5765921 5766211 -139823077 + AluSx SINE Alu 1 291 -21 2338 233 88 63 chr10 5766211 5766276 -139823012 + L1M4 LINE L1 5114 5242 -904 5432 65 9 9 chr10 5766449 5767170 -139822118 - L1PA7 LINE L1 -96 6058 5335 2136 116 0 3 chr10 5767170 5767454 -139821834 - AluSx SINE Alu -28 284 2 5432 65 9 9 chr10 5767454 5767472 -139821816 - L1PA7 LINE L1 -818 5336 5319 24 0 0 0 chr10 5768986 5769010 -139820278 + AT_rich Low_complexity Low_complexity 1 24 0 2201 121 19 10 chr10 5769079 5769386 -139819902 + AluSq SINE Alu 1 310 -3 1796 150 4 4 chr10 5770269 5770536 -139818752 + AluSx SINE Alu 1 267 -45 2258 125 0 0 chr10 5770808 5771112 -139818176 - AluSx SINE Alu -4 308 5 1378 150 13 13 chr10 5771277 5771504 -139817784 + AluJb SINE Alu 25 251 -61 180 182 0 0 chr10 5771771 5771804 -139817484 - L3 LINE CR1 -1348 229 197 1323 163 30 49 chr10 5773875 5774139 -139815149 - AluJo SINE Alu -14 298 40 207 301 68 14 chr10 5774732 5774805 -139814483 - MIR3 SINE MIR -20 188 112 351 237 11 0 chr10 5775177 5775270 -139814018 + L1M3 LINE L1 4463 4556 -1590 2113 197 115 47 chr10 5775313 5775793 -139813495 + L1M3 LINE L1 4669 5115 -1068 777 174 0 36 chr10 5775793 5775931 -139813357 + FLAM_A SINE Alu 1 133 0 2113 197 115 47 chr10 5775931 5776077 -139813211 + L1M3 LINE L1 5115 5250 -933 2168 109 14 0 chr10 5776077 5776370 -139812918 + AluSp SINE Alu 1 297 -16 2113 197 115 47 chr10 5776370 5776609 -139812679 + L1M3 LINE L1 5250 5603 -580 410 135 189 0 chr10 5776718 5776792 -139812496 - AluSg1 SINE Alu -220 89 2 673 179 179 21 chr10 5777161 5777176 -139812112 - AluJo SINE Alu -143 169 158 1649 169 3 44 chr10 5777176 5777472 -139811816 - AluJb SINE Alu -8 304 21 673 179 179 21 chr10 5777472 5777522 -139811766 - AluJo SINE Alu -154 158 117 186 43 0 0 chr10 5777522 5777545 -139811743 + (GTCTG)n Simple_repeat Simple_repeat 5 27 0 673 179 179 21 chr10 5777545 5777623 -139811665 - AluJo SINE Alu -195 117 2 2270 104 0 31 chr10 5777632 5777949 -139811339 - AluSg1 SINE Alu -2 307 1 490 208 2 97 chr10 5777980 5778055 -139811233 - L1ME2 LINE L1 -1 6165 6110 2214 107 0 0 chr10 5778055 5778336 -139810952 - AluSx SINE Alu -16 296 16 490 208 2 97 chr10 5778336 5778433 -139810855 - L1ME2 LINE L1 -56 6110 6005 2272 95 17 3 chr10 5778467 5778763 -139810525 - AluSx SINE Alu -12 300 1 198 0 0 0 chr10 5778781 5778803 -139810485 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 190 240 60 0 chr10 5778803 5778853 -139810435 - L2 LINE L2 -78 3235 3183 669 106 7 78 chr10 5778910 5778930 -139810358 + L1M LINE L1 5266 5286 -894 2008 102 42 7 chr10 5778930 5779213 -139810075 + AluSx SINE Alu 1 293 -19 669 106 7 78 chr10 5779213 5779334 -139809954 + L1M LINE L1 5286 5397 -783 1413 147 0 22 chr10 5779435 5779667 -139809621 - AluJb SINE Alu -85 227 1 258 155 52 0 chr10 5779668 5779726 -139809562 + L1MB5 LINE L1 6114 6174 0 298 341 82 16 chr10 5780724 5780906 -139808382 - MIR SINE MIR -16 246 53 224 120 20 40 chr10 5780939 5780989 -139808299 + A-rich Low_complexity Low_complexity 4 52 0 1862 148 173 0 chr10 5781413 5781778 -139807510 - MSTA LTR MaLR 0 428 1 1205 36 0 7 chr10 5782001 5782138 -139807150 + AluSg SINE Alu 2 137 -173 1658 50 0 15 chr10 5782144 5782385 -139806903 + AluY SINE Alu 86 323 0 2039 150 0 3 chr10 5782388 5782695 -139806593 + AluSx SINE Alu 1 306 -6 446 161 0 0 chr10 5782697 5782778 -139806510 + L1M LINE L1 5312 5392 -788 2039 113 3 7 chr10 5782793 5783099 -139806189 + AluSx SINE Alu 1 305 0 180 0 0 0 chr10 5783413 5783433 -139805855 + (TA)n Simple_repeat Simple_repeat 2 21 0 1751 184 0 3 chr10 5783761 5784054 -139805234 + AluJb SINE Alu 3 294 -18 2092 142 0 0 chr10 5784712 5785008 -139804280 - AluSx SINE Alu -14 298 3 2315 99 10 0 chr10 5785013 5785316 -139803972 - AluSx SINE Alu -6 306 1 878 178 18 6 chr10 5785318 5785481 -139803807 - AluJb SINE Alu -17 295 131 2403 89 10 0 chr10 5786308 5786611 -139802677 + AluSp SINE Alu 1 306 -7 1858 122 3 88 chr10 5786621 5786760 -139802528 + AluSx SINE Alu 1 99 -213 2223 105 7 3 chr10 5786760 5787054 -139802234 + AluSg SINE Alu 1 295 -15 1858 122 3 88 chr10 5787054 5787234 -139802054 + AluSx SINE Alu 99 293 -19 459 210 107 114 chr10 5787844 5788190 -139801098 + MLT1F LTR MaLR 166 555 0 209 311 0 0 chr10 5788190 5788251 -139801037 - L2 LINE L2 -819 2495 2435 2125 116 3 0 chr10 5788271 5788578 -139800710 + AluSq SINE Alu 1 308 0 1680 185 3 10 chr10 5788839 5789141 -139800147 + AluJb SINE Alu 1 300 -12 303 349 128 45 chr10 5789202 5789655 -139799633 - L2 LINE L2 -4 3268 2739 2380 90 13 0 chr10 5789655 5789955 -139799333 - AluSx SINE Alu -8 304 1 303 349 128 45 chr10 5789955 5790133 -139799155 - L2 LINE L2 -533 2739 2577 1179 123 12 0 chr10 5790283 5790453 -139798835 - AluSg/x SINE Alu -10 302 131 22 0 0 0 chr10 5790513 5790535 -139798753 + AT_rich Low_complexity Low_complexity 1 22 0 880 150 58 46 chr10 5790741 5790892 -139798396 - AluJo SINE Alu -18 294 139 2218 107 0 3 chr10 5790892 5791182 -139798106 - AluSg1 SINE Alu -20 289 1 880 150 58 46 chr10 5791182 5791203 -139798085 - AluJo SINE Alu -173 139 120 944 190 12 0 chr10 5791491 5791654 -139797634 + AluJb SINE Alu 135 299 -13 185 105 0 26 chr10 5793008 5793046 -139796242 + (TCCCC)n Simple_repeat Simple_repeat 2 38 0 242 206 147 15 chr10 5793737 5793805 -139795483 - MER5A DNA MER1_type -83 106 30 346 313 120 7 chr10 5794175 5794325 -139794963 - MIR SINE MIR -68 194 28 198 0 0 0 chr10 5794401 5794423 -139794865 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2130 113 0 0 chr10 5794436 5794710 -139794578 - AluSx SINE Alu -38 274 1 487 127 0 38 chr10 5794966 5795045 -139794243 - Tigger3(Golem) DNA MER2_type -730 2299 2224 2138 90 54 0 chr10 5795097 5795375 -139793913 - AluSc SINE Alu -16 293 1 1143 121 60 16 chr10 5795646 5795828 -139793460 + MER30B DNA MER1_type 1 190 0 183 397 0 15 chr10 5795865 5795933 -139793355 - MIR SINE MIR -195 67 1 617 132 0 101 chr10 5796157 5796197 -139793091 - L1MB3 LINE L1 0 6183 6141 2436 69 16 3 chr10 5796197 5796500 -139792788 - AluSq SINE Alu -6 307 1 617 132 0 101 chr10 5796500 5796618 -139792670 - L1MB3 LINE L1 -42 6141 6041 307 280 21 0 chr10 5796619 5796762 -139792526 - AluSg/x SINE Alu -17 283 138 9976 91 10 8 chr10 5796901 5798323 -139790965 - HERV9 LTR ERV1 -5699 2700 1277 1674 85 229 178 chr10 5798333 5798839 -139790449 - LTR12 LTR ERV1 -130 584 53 250 250 0 0 chr10 5798839 5798891 -139790397 - LTR30 LTR ERV1 -670 52 1 399 283 44 0 chr10 5798891 5799050 -139790238 - L1MB1 LINE L1 -11 6157 5992 189 280 0 67 chr10 5799054 5799129 -139790159 - MER5A DNA MER1_type -115 74 5 291 286 99 11 chr10 5799195 5799286 -139790002 - L2 LINE L2 -2127 1187 1089 358 279 62 93 chr10 5799688 5799946 -139789342 + L2 LINE L2 2891 3140 -132 2209 138 0 3 chr10 5800028 5800340 -139788948 + AluSx SINE Alu 1 311 -1 279 143 0 0 chr10 5800565 5800607 -139788681 + MER57A LTR ERV1 295 336 -67 2481 156 34 5 chr10 5800663 5801079 -139788209 - MSTB1 LTR MaLR -1 431 4 2229 103 0 0 chr10 5801546 5801864 -139787424 + AluSx SINE Alu 1 318 0 1110 156 23 37 chr10 5802106 5802324 -139786964 - MER20 DNA MER1_type -4 215 1 2259 118 0 22 chr10 5802651 5802966 -139786322 + AluSx SINE Alu 1 308 -4 2309 86 0 13 chr10 5802974 5803277 -139786011 + AluSg SINE Alu 1 299 -11 26 30 0 0 chr10 5803550 5803583 -139785705 + AT_rich Low_complexity Low_complexity 1 33 0 1739 76 167 8 chr10 5803585 5803836 -139785452 + AluSg SINE Alu 1 291 -9 1506 161 95 0 chr10 5803847 5804120 -139785168 + AluJb SINE Alu 1 299 -13 2232 93 6 29 chr10 5804465 5804778 -139784510 + AluSc SINE Alu 4 309 0 2287 75 34 17 chr10 5804811 5805105 -139784183 + AluSg SINE Alu 1 299 -11 267 250 125 0 chr10 5805229 5805317 -139783971 - MER103 DNA DNA 0 166 68 324 300 119 92 chr10 5805317 5805423 -139783865 + L1ME LINE L1 5553 5655 -507 1871 158 49 0 chr10 5805423 5805707 -139783581 + AluJb SINE Alu 1 298 -14 2088 145 3 0 chr10 5805709 5806013 -139783275 + AluSx SINE Alu 1 305 -7 324 300 119 92 chr10 5806013 5806130 -139783158 + L1ME LINE L1 5655 5785 -377 2304 95 10 0 chr10 5806275 5806580 -139782708 - AluSp SINE Alu -4 309 2 393 279 71 63 chr10 5806721 5806975 -139782313 + HAL1 LINE L1 19 274 -2233 2247 100 7 0 chr10 5807224 5807515 -139781773 - AluSx SINE Alu -19 293 1 390 251 113 87 chr10 5807817 5808058 -139781230 - L1MC4a LINE L1 -317 5804 5600 2369 78 10 0 chr10 5808640 5808934 -139780354 - AluSx SINE Alu -15 297 1 1727 140 0 111 chr10 5808995 5809337 -139779951 - AluJo SINE Alu -8 304 1 323 207 0 0 chr10 5809413 5809471 -139779817 - MLT1H LTR MaLR 0 549 492 509 254 124 37 chr10 5809545 5809762 -139779526 - MLT1H LTR MaLR -205 344 109 956 169 0 0 chr10 5810380 5810540 -139778748 + FRAM SINE Alu 5 164 -12 358 223 109 63 chr10 5810540 5810715 -139778573 - MLT1J LTR MaLR -48 463 281 1111 88 0 0 chr10 5810742 5810878 -139778410 + AluSq/x SINE Alu 1 136 -177 2178 100 3 0 chr10 5810878 5811168 -139778120 + AluSp SINE Alu 1 291 -22 2409 187 53 22 chr10 5811283 5811865 -139777423 + Charlie1 DNA MER1_type 1945 2544 -217 1398 175 0 24 chr10 5811867 5812118 -139777170 + AluJb SINE Alu 53 297 -15 657 164 164 0 chr10 5812132 5812303 -139776985 + Charlie1 DNA MER1_type 2558 2756 -5 2275 118 0 3 chr10 5812769 5813073 -139776215 - AluSx SINE Alu -9 303 1 547 242 117 17 chr10 5813090 5813321 -139775967 - L1ME3A LINE L1 -109 6061 5808 708 273 24 0 chr10 5813344 5813509 -139775779 + MER58A DNA MER1_type 26 194 -30 2324 99 0 10 chr10 5813512 5813815 -139775473 - AluSx SINE Alu -12 300 1 1674 179 4 0 chr10 5814407 5814687 -139774601 + AluJo SINE Alu 6 286 -26 180 0 0 0 chr10 5814716 5814736 -139774552 + (T)n Simple_repeat Simple_repeat 1 20 0 282 178 27 27 chr10 5815048 5815121 -139774167 - L1ME1 LINE L1 -5 6161 6089 651 248 94 71 chr10 5815283 5815537 -139773751 - MIR SINE MIR 0 262 3 504 341 81 0 chr10 5815566 5815789 -139773499 - L3 LINE CR1 -309 1268 1028 949 143 0 0 chr10 5815794 5815927 -139773361 - AluSg/x SINE Alu -44 266 134 2262 65 29 0 chr10 5815929 5816208 -139773080 - AluSp SINE Alu -4 309 23 275 273 105 49 chr10 5819326 5819469 -139769819 - L2 LINE L2 -186 3086 2936 2359 106 0 0 chr10 5819652 5819955 -139769333 - AluSx SINE Alu -9 303 1 207 0 0 0 chr10 5820168 5820191 -139769097 + (TG)n Simple_repeat Simple_repeat 2 24 0 2105 102 15 52 chr10 5820201 5820526 -139768762 - AluSq SINE Alu 0 313 1 1729 162 45 3 chr10 5820573 5820863 -139768425 - AluJb SINE Alu -10 302 1 312 303 28 9 chr10 5821419 5821528 -139767760 + MLT1J1 LTR MaLR 226 336 -110 287 230 54 0 chr10 5821592 5821666 -139767622 + MLT1J1 LTR MaLR 364 441 -5 22 0 0 0 chr10 5821816 5821838 -139767450 + AT_rich Low_complexity Low_complexity 1 22 0 368 254 63 48 chr10 5822653 5822779 -139766509 - MIR3 SINE MIR -75 133 6 194 0 39 0 chr10 5823858 5823884 -139765404 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1903 126 3 18 chr10 5823886 5824171 -139765117 - AluSx SINE Alu -31 281 1 2160 92 23 10 chr10 5825283 5825588 -139763700 + AluSq SINE Alu 1 309 -4 1714 157 21 14 chr10 5825595 5825875 -139763413 + AluJo SINE Alu 1 282 -30 249 357 20 0 chr10 5825982 5826080 -139763208 - L2 LINE L2 -221 3051 2952 713 190 20 77 chr10 5826115 5826274 -139763014 - MER53 DNA DNA -5 184 36 2080 136 0 13 chr10 5826274 5826590 -139762698 - AluSx SINE Alu 0 312 1 713 190 20 77 chr10 5826590 5826625 -139762663 - MER53 DNA DNA -153 36 1 449 290 103 60 chr10 5826752 5827100 -139762188 - MLT1J2 LTR MaLR -24 426 64 2462 87 0 0 chr10 5827105 5827414 -139761874 + AluSg SINE Alu 1 309 -1 1545 163 22 22 chr10 5827522 5827642 -139761646 + AluJb SINE Alu 11 130 -182 2419 91 0 0 chr10 5827642 5827939 -139761349 + AluSx SINE Alu 1 297 -15 1545 163 22 22 chr10 5827939 5828095 -139761193 + AluJb SINE Alu 129 287 -25 2071 145 3 0 chr10 5828372 5828675 -139760613 + AluSx SINE Alu 1 304 -8 193 286 0 0 chr10 5828705 5828747 -139760541 - MIR SINE MIR -140 122 81 1192 139 6 0 chr10 5829265 5829438 -139759850 + AluJo SINE Alu 1 174 -138 1719 93 0 9 chr10 5829667 5829893 -139759395 + AluSq SINE Alu 74 297 -16 1735 106 75 4 chr10 5830001 5830256 -139759032 - AluSx SINE Alu -35 277 5 2144 85 14 7 chr10 5830624 5830930 -139758358 + AluY SINE Alu 1 308 0 4301 205 105 20 chr10 5832306 5833420 -139755868 + L1MC4 LINE L1 6469 7677 -365 470 199 316 7 chr10 5833451 5833672 -139755616 + L1MC4 LINE L1 7763 7995 0 2183 119 3 0 chr10 5838492 5838786 -139750502 - AluSx SINE Alu -17 295 1 1533 119 14 0 chr10 5839359 5839578 -139749710 + AluSx SINE Alu 5 226 -86 2004 122 0 4 chr10 5839680 5839959 -139749329 + AluSq SINE Alu 1 278 -35 270 0 0 0 chr10 5839960 5839990 -139749298 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 578 269 75 21 chr10 5840732 5840918 -139748370 + MIR SINE MIR 41 236 -26 21 36 0 0 chr10 5841327 5841355 -139747933 + AT_rich Low_complexity Low_complexity 1 28 0 292 325 35 9 chr10 5842353 5842467 -139746821 - MIR3 SINE MIR -45 163 47 302 254 5 42 chr10 5843050 5843150 -139746138 + MER5A DNA MER1_type 13 98 -80 386 228 8 63 chr10 5843192 5843319 -139745969 - MIR SINE MIR -141 121 2 185 250 42 0 chr10 5845039 5845087 -139744201 - L2 LINE L2 -80 3233 3184 2107 105 0 28 chr10 5847018 5847327 -139741961 + AluSc SINE Alu 1 301 0 1394 119 0 99 chr10 5847729 5847852 -139741436 + AluJb SINE Alu 1 88 -224 2370 75 3 0 chr10 5847852 5848145 -139741143 - AluSg SINE Alu -16 294 1 1394 119 0 99 chr10 5848145 5848274 -139741014 + AluJb SINE Alu 88 228 -84 1401 169 139 4 chr10 5849290 5849556 -139739732 + AluJo SINE Alu 1 302 0 599 279 107 30 chr10 5850698 5850768 -139738520 - MER112 DNA MER1_type -9 251 188 2023 125 31 0 chr10 5850768 5851057 -139738231 - AluSx SINE Alu -14 298 1 599 279 107 30 chr10 5851057 5851219 -139738069 - MER112 DNA MER1_type -72 188 1 1525 154 85 24 chr10 5851445 5851738 -139737550 + AluJo SINE Alu 1 311 -1 513 271 8 0 chr10 5851841 5851963 -139737325 - MER58B DNA MER1_type -3 338 216 181 180 20 80 chr10 5852665 5852715 -139736573 - MER5A DNA MER1_type -125 64 18 1853 153 11 3 chr10 5852754 5853036 -139736252 - AluSx SINE Alu -28 284 1 832 150 8 0 chr10 5854730 5854863 -139734425 - AluJb SINE Alu -177 135 2 2109 119 3 0 chr10 5854909 5855216 -139734072 - AluSx SINE Alu 0 312 1 222 229 193 0 chr10 5855409 5855492 -139733796 + MIR SINE MIR 78 176 -86 1860 104 93 11 chr10 5855648 5855927 -139733361 - AluSc SINE Alu -7 302 1 1774 161 13 10 chr10 5856044 5856343 -139732945 - AluJb SINE Alu -12 300 1 294 241 76 0 chr10 5856354 5856433 -139732855 - L2 LINE L2 0 3313 3229 23 33 0 0 chr10 5856442 5856472 -139732816 + AT_rich Low_complexity Low_complexity 1 30 0 397 160 126 50 chr10 5856587 5856706 -139732582 - MER106A DNA MER1_type -1 235 108 413 287 10 0 chr10 5856891 5856992 -139732296 - L2 LINE L2 -954 2360 2259 290 313 47 7 chr10 5857000 5857150 -139732138 - L2 LINE L2 -1261 2053 1898 1552 177 0 53 chr10 5858493 5858798 -139730490 - AluJo SINE Alu -23 289 6 2435 76 26 0 chr10 5858862 5859165 -139730123 - AluY SINE Alu 0 311 1 1608 111 37 27 chr10 5859165 5859525 -139729763 + Tigger7 DNA MER2_type 180 2573 -14 27 0 0 0 chr10 5859534 5859561 -139729727 + AT_rich Low_complexity Low_complexity 1 27 0 347 138 11 0 chr10 5859586 5859673 -139729615 + (TA)n Simple_repeat Simple_repeat 2 89 0 26 64 0 0 chr10 5859691 5859738 -139729550 + AT_rich Low_complexity Low_complexity 1 47 0 2511 58 0 16 chr10 5860928 5861239 -139728049 + AluY SINE Alu 2 307 -4 2101 136 0 0 chr10 5861452 5861753 -139727535 - AluSx SINE Alu -10 302 2 1709 225 204 14 chr10 5861764 5862005 -139727283 - L1MD3 LINE L1 0 8037 7843 2040 146 0 3 chr10 5862005 5862307 -139726981 - AluJb SINE Alu -11 301 1 1709 225 204 14 chr10 5862307 5862870 -139726418 - L1MD3 LINE L1 -194 7843 7079 2292 107 3 7 chr10 5864837 5865145 -139724143 + AluSc SINE Alu 1 307 -2 2311 77 0 42 chr10 5865700 5866013 -139723275 - AluSq SINE Alu -13 300 1 23 0 0 0 chr10 5866070 5866093 -139723195 + AT_rich Low_complexity Low_complexity 1 23 0 180 347 41 41 chr10 5866863 5866961 -139722327 - L2 LINE L2 -652 2662 2565 237 167 0 0 chr10 5867533 5867587 -139721701 + (TA)n Simple_repeat Simple_repeat 2 55 0 1568 156 0 0 chr10 5867609 5867846 -139721442 - AluSx SINE Alu -75 237 1 310 198 62 0 chr10 5868062 5868143 -139721145 + L1MB8 LINE L1 5606 5691 -493 746 161 1 10 chr10 5868250 5868400 -139720888 + L1P3 LINE L1 5668 5805 -349 1540 172 36 45 chr10 5868401 5868669 -139720619 + MER7A DNA MER2_type 21 285 -2753 2005 128 0 24 chr10 5868669 5868966 -139720322 + AluSc SINE Alu 1 290 -19 1540 172 36 45 chr10 5868966 5869028 -139720260 + MER7A DNA MER2_type 285 346 0 1454 157 113 18 chr10 5869028 5869365 -139719923 + L1MB8 LINE L1 5800 6168 -10 21 0 0 0 chr10 5869367 5869388 -139719900 + AT_rich Low_complexity Low_complexity 1 21 0 414 235 114 8 chr10 5869815 5869947 -139719341 - MIR SINE MIR -12 250 105 886 130 0 71 chr10 5870540 5870694 -139718594 - FLAM_C SINE Alu 0 143 1 1618 212 0 0 chr10 5875608 5875919 -139713369 + AluJb SINE Alu 1 311 -1 620 152 18 30 chr10 5875919 5876084 -139713204 + GA-rich Low_complexity Low_complexity 1 163 0 254 259 12 25 chr10 5876732 5876813 -139712475 + MLT1L LTR MaLR 7 86 -529 441 0 0 0 chr10 5876834 5876883 -139712405 + (TG)n Simple_repeat Simple_repeat 1 49 0 508 235 29 7 chr10 5876950 5877086 -139712202 + MLT1L LTR MaLR 129 267 -348 336 228 142 16 chr10 5877179 5877306 -139711982 + MLT1L LTR MaLR 432 574 -41 2081 132 0 3 chr10 5877583 5877878 -139711410 - AluSx SINE Alu -18 294 1 231 232 29 0 chr10 5878087 5878156 -139711132 - HAL1 LINE L1 -585 1922 1852 2551 200 130 33 chr10 5878204 5879601 -139709687 + L1ME2 LINE L1 4567 6155 -9 774 347 99 62 chr10 5879785 5880356 -139708932 + L1M4 LINE L1 2933 3481 -2665 2037 120 0 10 chr10 5880356 5880655 -139708633 - AluSx SINE Alu -11 301 6 774 347 99 62 chr10 5880655 5880914 -139708374 + L1M4 LINE L1 3481 3729 -2417 2570 39 10 0 chr10 5880914 5881221 -139708067 + AluY SINE Alu 1 310 -1 774 347 99 62 chr10 5881221 5881556 -139707732 + L1M4 LINE L1 3729 4143 -2003 285 258 92 62 chr10 5881578 5881818 -139707470 - HAL1b LINE L1 -702 646 400 234 221 163 12 chr10 5881851 5881937 -139707351 - HAL1b LINE L1 -1026 322 224 234 0 0 0 chr10 5882054 5882080 -139707208 + (A)n Simple_repeat Simple_repeat 1 26 0 9143 150 36 24 chr10 5882090 5883871 -139705417 + L1MA4 LINE L1 3472 5321 -979 234 62 0 0 chr10 5883871 5883903 -139705385 + (CAAG)n Simple_repeat Simple_repeat 3 34 0 9143 150 36 24 chr10 5883903 5884893 -139704395 + L1MA4 LINE L1 5321 6298 -2 3463 174 20 36 chr10 5885187 5885936 -139703352 - L1MB8 LINE L1 0 6178 5442 22 35 0 0 chr10 5885936 5885965 -139703323 + AT_rich Low_complexity Low_complexity 1 29 0 793 206 35 0 chr10 5885996 5886166 -139703122 - MER58A DNA MER1_type -4 220 45 510 272 70 62 chr10 5886289 5886642 -139702646 - MLT1H LTR MaLR -4 545 72 590 136 9 9 chr10 5886688 5886798 -139702490 + L1MB7 LINE L1 6058 6167 -17 1447 282 148 42 chr10 5887590 5888061 -139701227 - HAL1 LINE L1 -1139 1368 948 1867 159 10 3 chr10 5888061 5888357 -139700931 + AluJo SINE Alu 1 298 -14 1447 282 148 42 chr10 5888357 5889064 -139700224 - HAL1 LINE L1 -1559 948 66 373 257 50 40 chr10 5889469 5889570 -139699718 + L2 LINE L2 3171 3272 0 412 297 62 15 chr10 5889587 5889860 -139699428 + L1MC/D LINE L1 3587 3872 -2274 531 234 131 11 chr10 5890190 5890365 -139698923 + L2 LINE L2 3118 3313 0 447 354 103 37 chr10 5890377 5890899 -139698389 + L2 LINE L2 2713 3263 -9 21 0 0 0 chr10 5891921 5891942 -139697346 + GC_rich Low_complexity Low_complexity 1 21 0 1660 145 104 0 chr10 5892551 5892820 -139696468 - AluSx SINE Alu -15 297 1 2325 87 3 3 chr10 5893507 5893805 -139695483 - AluSc SINE Alu -11 298 1 377 279 113 30 chr10 5894463 5894792 -139694496 + L1ME3A LINE L1 3135 3501 -2645 261 236 0 42 chr10 5894839 5894911 -139694377 + L1ME3A LINE L1 5446 5514 -2294 23 54 0 0 chr10 5894959 5894996 -139694292 + AT_rich Low_complexity Low_complexity 1 37 0 2371 81 0 0 chr10 5895101 5895396 -139693892 - AluSg SINE Alu -15 295 1 543 299 45 7 chr10 5895432 5895686 -139693602 + L1M1 LINE L1 2720 3055 -4596 1619 180 14 0 chr10 5895713 5895991 -139693297 - AluJo SINE Alu -30 282 1 2145 166 127 50 chr10 5895992 5896202 -139693086 + Charlie1 DNA MER1_type 2049 2241 -520 1563 156 20 60 chr10 5896202 5896503 -139692785 + AluJo SINE Alu 24 312 0 2145 166 127 50 chr10 5896503 5896894 -139692394 + Charlie1 DNA MER1_type 2241 2708 -53 1995 130 7 0 chr10 5896894 5897178 -139692110 - AluSx SINE Alu -26 286 1 2145 166 127 50 chr10 5897178 5897236 -139692052 + Charlie1 DNA MER1_type 2708 2760 -1 315 242 94 8 chr10 5897237 5897365 -139691923 + L1ME3A LINE L1 5825 5963 -207 320 266 121 35 chr10 5897624 5897823 -139691465 + L1MC/D LINE L1 4485 4700 -1446 401 300 147 56 chr10 5897868 5898311 -139690977 + L1MC/D LINE L1 5311 5793 -2015 318 327 132 69 chr10 5899379 5899902 -139689386 + L1M2 LINE L1 784 1339 -5510 3716 118 92 18 chr10 5900443 5901174 -139688114 - Tigger3(Golem) DNA MER2_type -2 3027 2243 1181 179 19 0 chr10 5901209 5901416 -139687872 - Tigger3(Golem) DNA MER2_type -2818 211 1 549 316 81 42 chr10 5901487 5901917 -139687371 - L2 LINE L2 0 3313 2867 896 232 127 81 chr10 5901919 5902424 -139686864 - L1ME3A LINE L1 -15 6155 5628 367 209 234 13 chr10 5902860 5903018 -139686270 - L1ME3A LINE L1 -551 5611 5419 2114 109 0 39 chr10 5903065 5903376 -139685912 - AluSq SINE Alu -14 299 1 2942 212 82 45 chr10 5903379 5904556 -139684732 - L1ME3A LINE L1 -1468 4678 3458 745 231 21 0 chr10 5904580 5904868 -139684420 + L1M4b LINE L1 1140 1507 -5352 184 167 119 24 chr10 5904939 5904981 -139684307 + MIR3 SINE MIR 109 154 -54 339 221 38 84 chr10 5905055 5905186 -139684102 - HAL1 LINE L1 -37 2470 2346 812 118 0 9 chr10 5905248 5905358 -139683930 - FLAM_C SINE Alu -25 118 10 306 278 119 16 chr10 5905365 5905491 -139683797 - HAL1 LINE L1 -200 2307 2169 192 97 0 0 chr10 5905614 5905645 -139683643 + (CA)n Simple_repeat Simple_repeat 1 31 0 834 265 92 12 chr10 5905908 5906233 -139683055 + LTR16B LTR ERVL 114 464 0 270 313 23 16 chr10 5906239 5906367 -139682921 + HERV16 LTR ERVL 6 134 -4862 344 337 35 25 chr10 5907172 5907457 -139681831 + HERV16 LTR ERVL 4709 4996 0 1053 298 59 11 chr10 5907457 5907900 -139681388 + LTR16B LTR ERVL 1 464 0 210 288 50 0 chr10 5907942 5908022 -139681266 + MER5A DNA MER1_type 8 91 -98 1727 145 0 0 chr10 5908024 5908273 -139681015 - AluSx SINE Alu -14 298 50 761 167 18 18 chr10 5908482 5908650 -139680638 + L1 LINE L1 4549 4716 -1430 1769 144 0 62 chr10 5908652 5908957 -139680331 + AluJb SINE Alu 14 299 -13 2100 113 50 0 chr10 5908959 5909242 -139680046 + AluSc SINE Alu 1 297 -12 648 156 16 0 chr10 5909242 5909370 -139679918 + L1MA5 LINE L1 6171 6300 0 193 40 0 0 chr10 5909538 5909563 -139679725 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 959 58 0 17 chr10 5909563 5909673 -139679615 - AluY SINE Alu -31 280 171 910 280 8 23 chr10 5909723 5909980 -139679308 + MIR SINE MIR 4 256 -6 587 192 111 39 chr10 5910001 5910229 -139679059 + L1MC5 LINE L1 7259 7415 -393 991 177 18 31 chr10 5910230 5910309 -139678979 + FAM SINE Alu 1 4294967214 -267 1819 98 206 46 chr10 5910309 5910630 -139678658 + MSTA LTR MaLR 1 390 -38 2447 63 0 35 chr10 5910630 5910945 -139678343 - AluY SINE Alu -7 304 1 1819 98 206 46 chr10 5910945 5910992 -139678296 + MSTA LTR MaLR 390 428 0 991 177 18 31 chr10 5910992 5911124 -139678164 + FAM SINE Alu -83 49 0 548 219 26 0 chr10 5911159 5911310 -139677978 + L1M4 LINE L1 2231 2385 -3761 26 93 0 0 chr10 5911315 5911390 -139677898 + AT_rich Low_complexity Low_complexity 1 75 0 1892 249 38 16 chr10 5911407 5912037 -139677251 + L1M4 LINE L1 2371 3014 -3132 291 287 59 20 chr10 5912054 5912155 -139677133 - MLT2F LTR ERVL -284 379 275 3936 276 100 52 chr10 5912199 5912849 -139676439 - ERVL LTR ERVL -2715 3049 2432 2338 83 0 0 chr10 5912849 5913138 -139676150 - AluSc SINE Alu 0 309 21 3936 276 100 52 chr10 5913138 5914165 -139675123 - ERVL LTR ERVL -3332 2432 1291 921 310 28 32 chr10 5914272 5914965 -139674323 - ERVL LTR ERVL -4646 1118 352 605 154 106 24 chr10 5915096 5915219 -139674069 - FLAM_A SINE Alu 0 133 1 1350 149 0 14 chr10 5915807 5916021 -139673267 + AluSg/x SINE Alu 94 304 -8 183 222 0 0 chr10 5916556 5916601 -139672687 + (CATA)n Simple_repeat Simple_repeat 4 48 0 25 0 0 0 chr10 5917175 5917200 -139672088 + AT_rich Low_complexity Low_complexity 1 25 0 240 195 35 46 chr10 5917998 5918085 -139671203 + (CCCGG)n Simple_repeat Simple_repeat 5 90 0 2264 122 0 0 chr10 5919428 5919731 -139669557 + AluSq SINE Alu 7 309 -4 1154 126 0 0 chr10 5919731 5919919 -139669369 + AluSg/x SINE Alu 132 319 0 463 281 96 45 chr10 5919922 5920214 -139669074 - HAL1 LINE L1 -218 2289 1983 213 277 0 15 chr10 5921335 5921400 -139667888 + CT-rich Low_complexity Low_complexity 4 67 0 233 304 39 20 chr10 5921789 5921891 -139667397 - HAL1 LINE L1 -2369 138 35 324 158 0 0 chr10 5921990 5922047 -139667241 + C-rich Low_complexity Low_complexity 5 61 0 2120 96 3 41 chr10 5922051 5922342 -139666946 - AluSx SINE Alu -32 280 1 2142 116 10 13 chr10 5922781 5923092 -139666196 + AluJb SINE Alu 1 310 -2 237 211 0 0 chr10 5923564 5923616 -139665672 + MER63 DNA MER1_type 696 747 -315 4111 148 81 44 chr10 5925915 5926207 -139663081 - L1MB2 LINE L1 -2 6169 5889 1415 134 181 0 chr10 5926207 5926461 -139662827 - AluSg SINE Alu 0 300 1 4111 148 81 44 chr10 5926461 5926473 -139662815 - L1MB2 LINE L1 -282 5889 5879 2089 113 3 36 chr10 5926473 5926782 -139662506 - AluSx SINE Alu -13 299 1 4111 148 81 44 chr10 5926782 5927449 -139661839 - L1MB2 LINE L1 -292 5879 5157 1256 268 51 3 chr10 5927613 5927964 -139661324 - MER87 LTR ERV1 0 541 174 2364 77 0 3 chr10 5928093 5928380 -139660908 - AluSg SINE Alu -14 296 11 203 234 11 117 chr10 5928422 5928516 -139660772 - L2 LINE L2 0 3272 3189 528 276 81 57 chr10 5929170 5929416 -139659872 - MIR SINE MIR -3 259 8 2227 109 0 16 chr10 5929529 5929833 -139659455 - AluSq SINE Alu -14 299 1 192 77 0 0 chr10 5930487 5930513 -139658775 + (A)n Simple_repeat Simple_repeat 1 26 0 1129 210 12 12 chr10 5930515 5930666 -139658622 + L1 LINE L1 4015 4169 -1977 2309 96 0 0 chr10 5930666 5930990 -139658298 + AluSx SINE Alu 1 324 0 1129 210 12 12 chr10 5930990 5931080 -139658208 + L1 LINE L1 4168 4257 -1889 289 318 132 21 chr10 5932137 5932326 -139656962 + MER63A DNA MER1_type 1 210 0 324 0 0 0 chr10 5932585 5932621 -139656667 + (TG)n Simple_repeat Simple_repeat 1 36 0 2199 134 3 0 chr10 5932725 5933030 -139656258 - AluJb SINE Alu -6 306 1 2160 112 7 17 chr10 5934923 5935219 -139654069 + AluSx SINE Alu 1 293 -19 325 335 0 0 chr10 5936158 5936337 -139652951 + (CGTG)n Simple_repeat Simple_repeat 1 179 0 338 335 0 0 chr10 5936509 5936688 -139652600 + (CGTG)n Simple_repeat Simple_repeat 1 179 0 302 328 0 0 chr10 5936614 5936785 -139652503 + (TG)n Simple_repeat Simple_repeat 2 172 0 * 712 176 8 0 chr10 5937494 5937625 -139651663 + FLAM_C SINE Alu 2 133 -10 358 278 51 77 chr10 5938018 5938291 -139650997 - MLT1K LTR MaLR 0 588 323 68 24 0 0 chr10 5939430 5939512 -139649776 + AT_rich Low_complexity Low_complexity 1 82 0 237 109 47 31 chr10 5939750 5939814 -139649474 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 2285 122 0 0 chr10 5939913 5940216 -139649072 - AluSx SINE Alu -9 303 1 1740 159 7 11 chr10 5940262 5940539 -139648749 - AluJb SINE Alu -36 276 1 1750 100 8 8 chr10 5941859 5942098 -139647190 + AluSx SINE Alu 55 293 -19 27 0 0 0 chr10 5942154 5942181 -139647107 + AT_rich Low_complexity Low_complexity 1 27 0 2184 97 0 72 chr10 5943355 5943675 -139645613 + AluSx SINE Alu 6 302 -10 428 103 0 0 chr10 5945306 5945364 -139643924 + AluSq/x SINE Alu 62 119 -193 2469 70 0 19 chr10 5946323 5946635 -139642653 - AluY SINE Alu -5 306 1 1958 163 7 0 chr10 5946682 5946982 -139642306 + AluSx SINE Alu 1 302 -10 452 287 61 57 chr10 5947169 5947256 -139642032 + L1ME3A LINE L1 5209 5294 -876 722 172 31 0 chr10 5947256 5947384 -139641904 + FLAM_C SINE Alu 1 132 -1 452 287 61 57 chr10 5947384 5947998 -139641290 + L1ME3A LINE L1 5294 5928 -242 967 98 0 0 chr10 5948154 5948287 -139641001 + FLAM_C SINE Alu 1 133 0 1377 177 58 50 chr10 5949990 5950145 -139639143 + MLT1A1 LTR MaLR 1 153 -212 2126 130 3 0 chr10 5950145 5950438 -139638850 + AluSq SINE Alu 1 294 -19 1377 177 58 50 chr10 5950438 5950604 -139638684 + MLT1A1 LTR MaLR 153 328 -37 1508 182 91 0 chr10 5950604 5950879 -139638409 - AluJo SINE Alu -12 300 1 1377 177 58 50 chr10 5950879 5950918 -139638370 + MLT1A1 LTR MaLR 328 365 0 358 177 54 11 chr10 5952837 5952939 -139636349 + (TCTA)n Simple_repeat Simple_repeat 1 97 -480 1886 170 0 0 chr10 5952939 5953227 -139636061 - 7SLRNA srpRNA srpRNA -12 308 21 358 177 54 11 chr10 5953227 5953391 -139635897 + (TCTA)n Simple_repeat Simple_repeat 97 577 0 1603 180 44 39 chr10 5954096 5954484 -139634804 - MLT1B LTR MaLR 0 390 1 214 250 0 59 chr10 5954627 5954695 -139634593 - MER91 DNA MER1_type 0 140 77 297 0 0 0 chr10 5954907 5954940 -139634348 + (T)n Simple_repeat Simple_repeat 1 33 0 743 273 83 5 chr10 5954985 5955190 -139634098 - MER58A DNA MER1_type 0 224 4 345 240 0 13 chr10 5955246 5955321 -139633967 - MLT1J LTR MaLR -202 309 236 1405 244 35 32 chr10 5956532 5956905 -139632383 + MLT1B LTR MaLR 1 374 -16 1766 187 3 7 chr10 5956992 5957291 -139631997 - AluJo SINE Alu -13 299 2 2610 50 0 3 chr10 5957387 5957688 -139631600 + AluY SINE Alu 1 300 -11 262 355 24 30 chr10 5957947 5958113 -139631175 + L2 LINE L2 3102 3266 -6 1844 152 0 49 chr10 5958890 5959218 -139630070 - AluJo SINE Alu 0 312 1 528 99 0 12 chr10 5959410 5959491 -139629797 - MADE1 DNA Mariner 0 80 1 186 347 67 0 chr10 5959797 5959872 -139629416 - MIR SINE MIR -99 163 84 229 250 49 107 chr10 5960184 5960289 -139628999 + ORSL DNA AcHobo 32 142 -133 24 0 0 0 chr10 5960289 5960313 -139628975 + AT_rich Low_complexity Low_complexity 1 24 0 229 250 49 107 chr10 5960313 5960331 -139628957 + ORSL DNA AcHobo 142 159 -116 2307 78 0 14 chr10 5960331 5960626 -139628662 + AluSc SINE Alu 1 291 -18 229 250 49 107 chr10 5960626 5960702 -139628586 + ORSL DNA AcHobo 159 242 -33 1319 148 0 37 chr10 5960854 5961070 -139628218 - AluJb SINE Alu -19 293 86 23 0 0 0 chr10 5961674 5961697 -139627591 + AT_rich Low_complexity Low_complexity 1 23 0 1551 148 41 10 chr10 5961700 5961991 -139627297 - L1MA9 LINE L1 -1 6311 6012 1127 122 0 12 chr10 5962070 5962234 -139627054 - AluJb SINE Alu -13 299 138 224 286 0 14 chr10 5962739 5962809 -139626479 + MIR SINE MIR 54 122 -86 1881 148 7 0 chr10 5962839 5963137 -139626151 - AluSx SINE Alu -12 300 1 201 196 22 0 chr10 5965286 5965332 -139623956 + (TTCA)n Simple_repeat Simple_repeat 3 49 0 259 264 50 25 chr10 5965871 5965992 -139623296 + MIR SINE MIR 59 182 -80 338 353 44 0 chr10 5966147 5966283 -139623005 - MIR SINE MIR -115 147 6 360 242 0 0 chr10 5966755 5966850 -139622438 + (CCTG)n Simple_repeat Simple_repeat 3 97 0 197 370 14 0 chr10 5968552 5968625 -139620663 - MIR SINE MIR -20 242 169 230 263 158 0 chr10 5968888 5968983 -139620305 + MIR SINE MIR 140 249 -13 318 50 0 0 chr10 5969358 5969398 -139619890 + (GGAA)n Simple_repeat Simple_repeat 3 42 0 2270 93 3 0 chr10 5969398 5969708 -139619580 + AluSx SINE Alu 2 312 0 2229 98 10 0 chr10 5971083 5971388 -139617900 - AluSx SINE Alu -4 308 1 273 302 85 48 chr10 5971557 5971582 -139617706 + L2 LINE L2 3077 3100 -172 1684 145 3 63 chr10 5971582 5971914 -139617374 - AluJb SINE Alu 0 312 1 273 302 85 48 chr10 5971914 5972077 -139617211 + L2 LINE L2 3100 3272 0 2253 100 0 0 chr10 5972766 5973065 -139616223 + AluSc SINE Alu 1 299 -10 968 106 17 22 chr10 5973846 5974026 -139615262 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 228 185 0 65 chr10 5974026 5974118 -139615170 + CT-rich Low_complexity Low_complexity 2 87 0 190 224 336 9 chr10 5975190 5975297 -139613991 + MIR3 SINE MIR 35 176 -32 1680 150 11 0 chr10 5976900 5977166 -139612122 + AluJo SINE Alu 1 269 -43 335 77 0 19 chr10 5977212 5977264 -139612024 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 274 331 69 25 chr10 5978270 5978430 -139610858 - MIR3 SINE MIR -22 186 20 1023 134 12 0 chr10 5978762 5978926 -139610362 + FRAM SINE Alu 1 158 -18 718 80 0 18 chr10 5979623 5979736 -139609552 + (TTCC)n Simple_repeat Simple_repeat 2 112 0 807 176 0 0 chr10 5979781 5979917 -139609371 - AluJ SINE Alu -44 268 133 241 307 13 0 chr10 5980433 5980508 -139608780 - L1ME3A LINE L1 -27 6143 6068 301 255 36 0 chr10 5980540 5980667 -139608621 - L1ME3 LINE L1 -169 5995 5862 1358 206 33 30 chr10 5980985 5981349 -139607939 + MLT1A1 LTR MaLR 1 365 0 735 146 0 24 chr10 5981754 5981877 -139607411 - AluJ SINE Alu -177 135 16 1552 172 32 0 chr10 5983192 5983471 -139605817 - AluJo SINE Alu -24 288 1 266 250 22 33 chr10 5983761 5983853 -139605435 + CT-rich Low_complexity Low_complexity 6 96 0 2317 211 56 36 chr10 5984363 5984733 -139604555 + L1ME2 LINE L1 5453 5843 -321 1951 133 3 0 chr10 5984733 5985027 -139604261 + AluSq SINE Alu 1 295 -18 2317 211 56 36 chr10 5985027 5985299 -139603989 + L1ME2 LINE L1 5843 6108 -56 29 28 0 0 chr10 5985299 5985335 -139603953 + AT_rich Low_complexity Low_complexity 1 36 0 10369 90 69 4 chr10 5985335 5986976 -139602312 - L1PBa LINE L1 -3802 3060 1311 373 169 0 0 chr10 5986979 5987038 -139602250 - L1PBa LINE L1 -5705 1158 1100 21 57 0 0 chr10 5987075 5987110 -139602178 + AT_rich Low_complexity Low_complexity 1 35 0 2092 130 0 3 chr10 5987450 5987757 -139601531 - AluSx SINE Alu -6 306 1 2170 95 17 0 chr10 5988246 5988541 -139600747 - AluSx SINE Alu -7 305 6 2053 114 3 10 chr10 5989306 5989603 -139599685 + AluSq SINE Alu 5 299 -14 541 176 231 0 chr10 5990270 5990378 -139598910 - FLAM_C SINE Alu 0 133 1 339 118 88 137 chr10 5990526 5990574 -139598714 + Tigger2 DNA MER2_type 1 43 -2675 1347 130 74 9 chr10 5990574 5990790 -139598498 + MER30 DNA MER1_type 1 230 0 339 118 88 137 chr10 5990790 5990843 -139598445 + Tigger2 DNA MER2_type 43 97 -2621 1925 127 3 20 chr10 5990846 5991146 -139598142 - AluSx SINE Alu -17 295 1 1590 151 52 17 chr10 5991188 5991479 -139597809 - AluJo SINE Alu -11 301 1 849 211 0 61 chr10 5991485 5991665 -139597623 - FAM SINE Alu -6 169 1 3530 132 78 8 chr10 5991665 5992277 -139597011 + Tigger2 DNA MER2_type 90 744 -1974 883 144 25 80 chr10 5992343 5992441 -139596847 + Tigger2 DNA MER2_type 2461 2544 -174 1959 136 0 7 chr10 5992441 5992742 -139596546 + AluSq SINE Alu 1 299 -14 883 144 25 80 chr10 5992742 5992844 -139596444 + Tigger2 DNA MER2_type 2544 2650 -68 640 159 9 0 chr10 5992846 5992953 -139596335 - Tigger1 DNA MER2_type -734 1684 1577 691 193 0 30 chr10 5992953 5993088 -139596200 + FLAM_C SINE Alu 1 131 -2 1147 176 36 40 chr10 5993126 5993376 -139595912 + AluJo SINE Alu 38 286 -26 464 298 105 34 chr10 5993718 5993956 -139595332 + MIR SINE MIR 7 261 -1 583 222 0 17 chr10 5994039 5994156 -139595132 + L2 LINE L2 3192 3306 -7 1471 152 50 21 chr10 5994495 5994778 -139594510 - AluJb SINE Alu -21 291 1 699 168 0 9 chr10 5995005 5995118 -139594170 + FLAM_C SINE Alu 2 113 -30 391 283 65 14 chr10 5995685 5995823 -139593465 - L2 LINE L2 -6 3266 3122 408 372 5 16 chr10 5995896 5996084 -139593204 - MIR SINE MIR -69 193 8 1926 125 3 0 chr10 5996112 5996400 -139592888 + AluJb SINE Alu 2 290 -22 555 235 62 0 chr10 5997400 5997562 -139591726 + L1ME LINE L1 5177 5348 -798 598 144 161 34 chr10 5997619 5997737 -139591551 - FLAM_C SINE Alu 0 133 1 1161 228 172 3 chr10 5997759 5998114 -139591174 + L1ME LINE L1 5386 5800 -370 494 296 123 0 chr10 5998125 5998287 -139591001 + MER5A DNA MER1_type 3 184 -5 254 174 43 0 chr10 5998295 5998341 -139590947 + MER5A DNA MER1_type 2 49 -140 1421 170 4 18 chr10 5998352 5998629 -139590659 + AluJb SINE Alu 9 281 -31 707 205 24 0 chr10 5998661 5998788 -139590500 + MER5A DNA MER1_type 56 185 -4 253 161 214 0 chr10 5998793 5998849 -139590439 - MER5A DNA MER1_type -114 75 8 2280 92 3 0 chr10 5998896 5999201 -139590087 + AluSx SINE Alu 1 306 -6 739 192 58 12 chr10 5999812 5999984 -139589304 - L1MA10 LINE L1 -11 6323 6144 2037 135 0 3 chr10 6000132 6000436 -139588852 + AluSx SINE Alu 1 303 -9 1651 154 26 7 chr10 6000522 6000827 -139588461 + AluSx SINE Alu 1 311 -1 1648 173 16 7 chr10 6000888 6001194 -139588094 + AluJo SINE Alu 3 311 -1 1941 152 0 0 chr10 6001199 6001508 -139587780 + AluSx SINE Alu 4 312 0 247 230 292 6 chr10 6001527 6001688 -139587600 + L1MC4 LINE L1 7689 7895 -147 1493 178 176 69 chr10 6002721 6002771 -139586517 + Charlie1a DNA MER1_type 65 108 -2653 2101 108 7 7 chr10 6002771 6003077 -139586211 - AluSq SINE Alu -7 306 1 1493 178 176 69 chr10 6003077 6003222 -139586066 + Charlie1a DNA MER1_type 108 236 -2525 1857 140 3 3 chr10 6003222 6003515 -139585773 + AluSp SINE Alu 5 297 -16 1493 178 176 69 chr10 6003515 6003553 -139585735 + Charlie1a DNA MER1_type 236 269 -2492 1646 171 11 0 chr10 6003553 6003840 -139585448 + AluSx SINE Alu 1 290 -22 1493 178 176 69 chr10 6003840 6004143 -139585145 + Charlie1a DNA MER1_type 269 661 -794 2157 91 0 0 chr10 6004143 6004428 -139584860 + AluSc SINE Alu 1 285 -24 291 93 0 0 chr10 6004544 6004587 -139584701 + (TA)n Simple_repeat Simple_repeat 2 44 0 1008 235 81 59 chr10 6004587 6004669 -139584619 + L1ME2 LINE L1 5685 5764 -400 1863 152 0 26 chr10 6004669 6004971 -139584317 - AluSx SINE Alu -18 294 1 1008 235 81 59 chr10 6004971 6005296 -139583992 + L1ME2 LINE L1 5764 6101 -63 270 216 69 78 chr10 6005344 6005446 -139583842 - HsTC2 DNA Tc2 -2 1896 1796 1940 138 10 0 chr10 6006560 6006851 -139582437 + AluSx SINE Alu 1 294 -18 450 258 113 32 chr10 6006857 6007043 -139582245 - LTR33A LTR ERVL -26 497 297 581 188 257 10 chr10 6007590 6007640 -139581648 + MER69 DNA AcHobo 2183 2219 -307 1674 160 0 53 chr10 6007640 6007960 -139581328 + AluSx SINE Alu 1 304 0 581 188 257 10 chr10 6007960 6008110 -139581178 + MER69 DNA AcHobo 2219 2434 -92 3531 225 47 77 chr10 6008281 6009475 -139579813 - L1MCc LINE L1 -2898 4043 2989 2025 151 0 0 chr10 6009475 6009787 -139579501 - AluSx SINE Alu 0 312 1 3531 225 47 77 chr10 6009787 6011009 -139578279 - L1MCc LINE L1 -3952 2989 1732 369 167 154 0 chr10 6011025 6011103 -139578185 - MLT1B LTR MaLR -300 90 1 511 248 76 0 chr10 6011107 6011430 -139577858 - L1MCc LINE L1 -4851 1571 1198 865 209 6 17 chr10 6011438 6011610 -139577678 + MER45A DNA AcHobo 1 170 -8 827 126 0 15 chr10 6012330 6012465 -139576823 + FLAM_C SINE Alu 1 133 0 751 266 55 44 chr10 6012489 6012764 -139576524 - MLT1J LTR MaLR -34 477 200 695 163 8 16 chr10 6012962 6013085 -139576203 + FLAM_C SINE Alu 2 123 -10 22 35 0 0 chr10 6013343 6013372 -139575916 + AT_rich Low_complexity Low_complexity 1 29 0 2222 113 0 0 chr10 6013475 6013785 -139575503 + AluSx SINE Alu 1 310 0 6021 52 1 1 chr10 6013921 6014702 -139574586 + L1PA3 LINE L1 5375 6155 0 180 77 0 0 chr10 6014712 6014738 -139574550 + (A)n Simple_repeat Simple_repeat 1 26 0 1051 166 4 4 chr10 6014738 6016098 -139573190 - ALR/Alpha Satellite centromeric 0 1360 1 1806 180 10 10 chr10 6016647 6016947 -139572341 - AluJb SINE Alu -8 304 5 1417 118 14 5 chr10 6017360 6017580 -139571708 + Charlie3 DNA MER1_type 2485 2706 -4 2339 104 3 0 chr10 6017794 6018091 -139571197 - AluSp SINE Alu -14 299 2 317 195 103 0 chr10 6018106 6018193 -139571095 - MLT1J LTR MaLR -28 483 388 2442 74 0 10 chr10 6018978 6019287 -139570001 - AluSc SINE Alu -3 306 1 216 0 0 0 chr10 6019291 6019315 -139569973 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1838 116 0 0 chr10 6020202 6020443 -139568845 - AluSx SINE Alu -14 298 58 676 158 38 15 chr10 6020498 6020671 -139568617 + FLAM_C SINE Alu 6 181 0 1672 144 0 4 chr10 6021452 6021688 -139567600 + AluJo SINE Alu 1 235 -77 828 257 155 40 chr10 6021856 6022018 -139567270 + HAL1 LINE L1 1172 1314 -1193 2305 109 3 0 chr10 6022018 6022312 -139566976 + AluSx SINE Alu 1 295 -17 828 257 155 40 chr10 6022312 6022569 -139566719 + HAL1 LINE L1 1314 1639 -868 1071 138 25 0 chr10 6022573 6022732 -139566556 + FRAM SINE Alu 8 170 -6 625 220 38 6 chr10 6022733 6022892 -139566396 + HAL1 LINE L1 1623 1786 -721 2047 108 41 7 chr10 6022941 6023236 -139566052 + AluSx SINE Alu 1 305 -7 363 333 35 0 chr10 6023485 6023656 -139565632 - HAL1 LINE L1 -614 1893 1717 312 185 33 22 chr10 6023753 6023845 -139565443 + HAL1 LINE L1 2319 2411 -96 480 305 72 19 chr10 6024276 6024538 -139564750 - L2 LINE L2 -811 2503 2228 2004 199 52 22 chr10 6024964 6025422 -139563866 + L1MC3 LINE L1 5607 6078 -1707 2176 93 20 13 chr10 6025422 6025722 -139563566 - AluSx SINE Alu -10 302 1 326 175 34 3 chr10 6025746 6025816 -139563472 + AluS SINE Alu 3 57 -243 258 253 40 0 chr10 6025994 6026069 -139563219 - LTR67 LTR ERVL -2 555 478 226 202 165 28 chr10 6026084 6026193 -139563095 + AluJb SINE Alu 5 128 -174 1026 144 0 6 chr10 6027771 6027938 -139561350 - FRAM SINE Alu 0 166 1 2264 115 0 0 chr10 6028708 6029003 -139560285 - AluSq SINE Alu -18 295 1 207 0 0 0 chr10 6030194 6030217 -139559071 + (A)n Simple_repeat Simple_repeat 1 23 0 1626 172 0 12 chr10 6030523 6030779 -139558509 + AluJb SINE Alu 2 254 -58 201 74 0 0 chr10 6030791 6030818 -139558470 + (CAAAA)n Simple_repeat Simple_repeat 3 29 0 3982 78 18 12 chr10 6030930 6031497 -139557791 + L1PA8A LINE L1 5562 6131 0 2116 104 24 0 chr10 6032226 6032513 -139556775 - AluSx SINE Alu -18 294 1 386 393 13 13 chr10 6032938 6033162 -139556126 - MIR SINE MIR -3 259 36 200 438 20 7 chr10 6033216 6033369 -139555919 + L2 LINE L2 3116 3270 -2 238 83 0 42 chr10 6033637 6033685 -139555603 + (TCC)n Simple_repeat Simple_repeat 3 48 0 1788 168 7 7 chr10 6034282 6034586 -139554702 + AluJo SINE Alu 1 304 -8 3207 106 11 44 chr10 6035221 6035395 -139553893 - L1MA5A LINE L1 -1 6296 6118 2269 115 0 3 chr10 6035395 6035700 -139553588 - AluSx SINE Alu -3 309 6 3207 106 11 44 chr10 6035700 6036099 -139553189 - L1MA5A LINE L1 -179 6118 5742 1951 137 20 10 chr10 6036174 6036473 -139552815 - AluJb SINE Alu -10 302 1 533 280 125 41 chr10 6036544 6037339 -139551949 - L2 LINE L2 -13 3300 2353 208 242 0 16 chr10 6037400 6037462 -139551826 - L2 LINE L2 -1522 1792 1732 24 67 0 0 chr10 6038534 6038579 -139550709 + AT_rich Low_complexity Low_complexity 1 45 0 1941 138 7 14 chr10 6038605 6038895 -139550393 + AluSx SINE Alu 7 294 -18 2153 102 0 36 chr10 6038998 6039191 -139550097 + L1PA15 LINE L1 5845 6023 -142 1836 154 33 10 chr10 6039191 6039490 -139549798 + AluJb SINE Alu 1 306 -6 2153 102 0 36 chr10 6039490 6039629 -139549659 + L1PA15 LINE L1 6023 6165 0 2106 82 16 0 chr10 6039696 6039953 -139549335 + AluSx SINE Alu 1 261 -51 904 71 18 0 chr10 6039997 6040109 -139549179 + AluSg/x SINE Alu 183 296 -14 28 0 0 0 chr10 6040779 6040807 -139548481 + AT_rich Low_complexity Low_complexity 1 28 0 1240 219 119 46 chr10 6041377 6041898 -139547390 + MLT1E3 LTR MaLR 32 590 -34 2246 108 3 10 chr10 6042047 6042352 -139546936 - AluSc SINE Alu -6 303 1 227 178 171 112 chr10 6042361 6042513 -139546775 - L1MC4 LINE L1 -2 8040 7880 364 280 21 0 chr10 6042607 6042700 -139546588 - MIR SINE MIR -108 154 60 286 284 0 0 chr10 6042742 6042816 -139546472 - LTR33A LTR ERVL -1 522 449 303 308 60 8 chr10 6043047 6043180 -139546108 + MIR3 SINE MIR 51 190 -18 475 203 92 26 chr10 6043709 6043862 -139545426 + LTR67 LTR ERVL 395 557 0 619 197 15 22 chr10 6043864 6044001 -139545287 - MIR SINE MIR -64 198 63 1792 167 24 17 chr10 6044056 6044378 -139544910 + AluJb SINE Alu 1 312 0 1059 163 5 16 chr10 6044612 6044796 -139544492 - AluJb SINE Alu -10 302 121 587 108 32 0 chr10 6044900 6044993 -139544295 - AluJ/FLAM SINE Alu -215 97 2 3424 229 111 3 chr10 6045064 6046011 -139543277 - L1MC4 LINE L1 -237 7805 6757 2355 110 0 10 chr10 6046011 6046033 -139543255 - AluSx SINE Alu -5 307 286 264 100 0 0 chr10 6046033 6046073 -139543215 + (CTTG)n Simple_repeat Simple_repeat 2 41 0 2355 110 0 10 chr10 6046073 6046360 -139542928 - AluSx SINE Alu -26 286 1 428 214 9 0 chr10 6046622 6046734 -139542554 + (ATG)n Simple_repeat Simple_repeat 2 114 0 412 192 73 136 chr10 6047683 6047860 -139541428 + MER5A DNA MER1_type 24 189 0 1988 228 108 67 chr10 6048641 6049122 -139540166 - MER21B LTR ERV1 -51 812 287 2125 117 10 0 chr10 6049122 6049412 -139539876 - AluSx SINE Alu -19 293 1 1988 228 108 67 chr10 6049412 6049693 -139539595 - MER21B LTR ERV1 -576 287 19 323 257 89 20 chr10 6050592 6050693 -139538595 - L2 LINE L2 -16 3297 3190 2067 114 3 31 chr10 6050854 6051141 -139538147 + AluJb SINE Alu 2 281 -31 216 0 0 0 chr10 6051141 6051165 -139538123 + (CA)n Simple_repeat Simple_repeat 2 25 0 2067 114 3 31 chr10 6051165 6051194 -139538094 + AluJb SINE Alu 281 309 -3 22 35 0 0 chr10 6051647 6051676 -139537612 + GC_rich Low_complexity Low_complexity 1 29 0 28 29 0 0 chr10 6051717 6051752 -139537536 + GC_rich Low_complexity Low_complexity 1 35 0 347 238 220 24 chr10 6054368 6054536 -139534752 - LTR33 LTR ERVL -241 280 80 197 271 208 0 chr10 6054796 6054892 -139534396 - L2 LINE L2 0 3272 3157 2009 132 3 17 chr10 6055556 6055852 -139533436 + AluJo SINE Alu 7 298 -14 2424 88 3 0 chr10 6056060 6056366 -139532922 + AluSx SINE Alu 1 307 -5 1027 89 0 182 chr10 6056378 6056614 -139532674 + 7SK RNA RNA 1 193 0 1031 116 103 1 chr10 6056631 6056838 -139532450 - L1MA5A LINE L1 -421 5876 5652 1991 131 10 16 chr10 6057093 6057398 -139531890 + AluSx SINE Alu 1 303 -9 2097 139 0 7 chr10 6057470 6057780 -139531508 + AluSx SINE Alu 1 308 -4 286 235 82 20 chr10 6058696 6058794 -139530494 - MER5B DNA MER1_type -14 164 61 416 271 49 7 chr10 6058794 6058938 -139530350 + MER112 DNA MER1_type 94 243 -17 1714 187 3 13 chr10 6059350 6059649 -139529639 + AluJb SINE Alu 2 297 -15 2151 116 33 7 chr10 6059651 6059953 -139529335 + AluSx SINE Alu 1 310 -2 273 263 63 0 chr10 6060079 6060174 -139529114 - L2 LINE L2 -27 3286 3186 2246 92 3 3 chr10 6060325 6060619 -139528669 + AluSx SINE Alu 1 294 -18 490 268 121 53 chr10 6060757 6061002 -139528286 - L2 LINE L2 -342 2972 2745 2169 125 0 7 chr10 6061002 6061299 -139527989 - AluSx SINE Alu -15 297 3 490 268 121 53 chr10 6061299 6061539 -139527749 - L2 LINE L2 -569 2745 2454 2654 46 0 7 chr10 6061951 6062257 -139527031 - AluY SINE Alu -7 304 1 700 161 0 15 chr10 6062721 6062851 -139526437 - L1PB4 LINE L1 -101 6055 5928 315 0 0 0 chr10 6062883 6062918 -139526370 + (TG)n Simple_repeat Simple_repeat 2 36 0 1735 172 7 14 chr10 6062919 6063209 -139526079 - AluJb SINE Alu -24 288 1 189 0 0 0 chr10 6063239 6063260 -139526028 + (TTAA)n Simple_repeat Simple_repeat 2 22 0 1929 108 75 4 chr10 6063261 6063539 -139525749 - AluSg SINE Alu -12 298 1 991 123 20 27 chr10 6063675 6063821 -139525467 - AluSq/x SINE Alu -167 145 1 460 267 87 20 chr10 6063824 6063974 -139525314 - HERV16 LTR ERVL -3144 1852 1693 * 491 370 26 18 chr10 6063970 6064243 -139525045 + ERVL LTR ERVL 3652 3926 -1838 1821 145 48 3 chr10 6064245 6064534 -139524754 + AluSq SINE Alu 1 302 -11 1049 116 0 7 chr10 6064942 6065088 -139524200 + AluSq/x SINE Alu 2 146 -166 508 141 0 0 chr10 6065088 6065166 -139524122 + AluS SINE Alu 221 298 -12 471 278 143 30 chr10 6065851 6066186 -139523102 + LTR16A LTR ERVL 61 433 -17 234 296 0 20 chr10 6066485 6066583 -139522705 + A-rich Low_complexity Low_complexity 2 97 0 1438 174 17 20 chr10 6066768 6067061 -139522227 - AluSq SINE Alu -21 292 1 244 323 23 46 chr10 6067288 6067418 -139521870 + MIR SINE MIR 136 262 0 182 304 0 0 chr10 6067589 6067635 -139521653 + L2 LINE L2 3252 3297 -16 1071 92 0 0 chr10 6067641 6067794 -139521494 + (TGGA)n Simple_repeat Simple_repeat 4 156 0 796 157 0 29 chr10 6067813 6068256 -139521032 + (TGGA)n Simple_repeat Simple_repeat 1 429 0 337 271 75 40 chr10 6069043 6069242 -139520046 - L1ME4a LINE L1 -116 6005 5800 634 280 21 5 chr10 6069431 6069620 -139519668 + LTR16A1 LTR ERVL 252 443 -14 291 250 0 12 chr10 6069637 6069717 -139519571 - L1ME4a LINE L1 -318 5803 5725 2280 97 30 0 chr10 6071885 6072184 -139517104 + AluSx SINE Alu 1 308 -4 2303 119 3 0 chr10 6072192 6072503 -139516785 + AluSx SINE Alu 1 312 0 1698 148 26 22 chr10 6072516 6072827 -139516461 - MER47A DNA MER2_type -54 312 1 2243 90 10 10 chr10 6073260 6073549 -139515739 - AluSx SINE Alu -23 289 1 2363 97 0 7 chr10 6074091 6074391 -139514897 + AluSg1 SINE Alu 1 298 -11 228 259 65 9 chr10 6074589 6074697 -139514591 - L1P4 LINE L1 -312 5851 5738 338 314 134 23 chr10 6074729 6074901 -139514387 - L1ME LINE L1 -332 5789 5599 2361 110 3 0 chr10 6075312 6075620 -139513668 - AluSg SINE Alu -1 309 1 516 247 16 59 chr10 6076208 6076394 -139512894 + MER5B DNA MER1_type 1 178 0 1072 125 96 82 chr10 6076443 6076722 -139512566 - MLT1A1 LTR MaLR -3 425 69 2485 59 0 20 chr10 6076722 6077025 -139512263 - AluY SINE Alu -14 297 1 1072 125 96 82 chr10 6077025 6077095 -139512193 - MLT1A1 LTR MaLR -359 69 1 4765 147 20 71 chr10 6077332 6078102 -139511186 - L1MA7 LINE L1 -4 6287 5479 2439 92 3 9 chr10 6078102 6078417 -139510871 - AluSp SINE Alu 0 313 1 4765 147 20 71 chr10 6078417 6078656 -139510632 - L1MA7 LINE L1 -812 5479 5333 2123 120 0 14 chr10 6078656 6078948 -139510340 - AluSx SINE Alu -6 306 19 4765 147 20 71 chr10 6078948 6079002 -139510286 - L1MA7 LINE L1 -958 5333 5278 242 246 16 127 chr10 6079327 6079453 -139509835 + MIR SINE MIR 81 192 -70 635 223 114 0 chr10 6080465 6080631 -139508657 + L1PA16 LINE L1 5962 6146 -20 29 28 0 0 chr10 6080631 6080667 -139508621 + AT_rich Low_complexity Low_complexity 1 36 0 2172 106 0 10 chr10 6080667 6081025 -139508263 + AluSx SINE Alu 1 355 0 691 91 10 0 chr10 6081477 6081576 -139507712 + HY3 scRNA scRNA 1 100 -1 1826 133 0 46 chr10 6081592 6081906 -139507382 + AluJb SINE Alu 14 314 0 2330 108 0 0 chr10 6081914 6082209 -139507079 + AluSg SINE Alu 1 295 -15 364 259 184 6 chr10 6082209 6082367 -139506921 + MIR3 SINE MIR 22 207 -1 800 164 31 0 chr10 6083156 6083284 -139506004 + AluJo SINE Alu 4 135 -177 1873 182 0 7 chr10 6083284 6083591 -139505697 + AluJo SINE Alu 1 305 -7 283 283 0 0 chr10 6084241 6084301 -139504987 + L2 LINE L2 3203 3262 -10 2314 115 0 0 chr10 6084421 6084716 -139504572 + AluSx SINE Alu 1 295 -17 881 183 11 123 chr10 6085025 6085165 -139504123 + L1MD3 LINE L1 7009 7102 -893 1705 165 13 22 chr10 6085165 6085480 -139503808 + AluJo SINE Alu 1 312 0 881 183 11 123 chr10 6085480 6085624 -139503664 + L1MD3 LINE L1 7102 7261 -734 871 122 46 8 chr10 6085628 6085759 -139503529 - AluJo SINE Alu -176 136 1 613 186 8 0 chr10 6085761 6085879 -139503409 + MLT1F1 LTR MaLR 2 120 -447 2573 163 48 39 chr10 6085883 6086104 -139503184 + L1MD3 LINE L1 7403 7621 -374 2359 94 0 7 chr10 6086104 6086401 -139502887 + AluSg SINE Alu 1 295 -15 2573 163 48 39 chr10 6086401 6086745 -139502543 + L1MD3 LINE L1 7621 7973 -22 2063 115 3 0 chr10 6086745 6087031 -139502257 + AluSx SINE Alu 1 287 -25 445 212 71 0 chr10 6087235 6087334 -139501954 - Charlie2 DNA MER1_type -2714 148 43 2082 131 0 0 chr10 6087336 6087626 -139501662 + AluJb SINE Alu 2 291 -21 215 287 59 20 chr10 6087955 6088056 -139501232 + MIR SINE MIR 60 164 -98 4193 85 5 0 chr10 6088162 6088752 -139500536 + L1PA12 LINE L1 5576 6168 0 225 0 0 0 chr10 6088806 6088831 -139500457 + (T)n Simple_repeat Simple_repeat 1 25 0 2139 148 0 0 chr10 6088844 6089154 -139500134 + AluSx SINE Alu 1 310 -2 2019 138 10 0 chr10 6089443 6089732 -139499556 + AluJb SINE Alu 1 292 -20 372 299 59 18 chr10 6090115 6090336 -139498952 - L2 LINE L2 -263 3050 2821 180 316 38 13 chr10 6090983 6091062 -139498226 - MIR SINE MIR -117 145 65 2365 109 0 0 chr10 6091242 6091554 -139497734 + AluSx SINE Alu 1 312 0 23 0 0 0 chr10 6091554 6091577 -139497711 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr10 6092030 6092052 -139497236 + AT_rich Low_complexity Low_complexity 1 22 0 2564 64 0 0 chr10 6096293 6096589 -139492699 + AluSq SINE Alu 1 296 -17 451 262 115 47 chr10 6096785 6096976 -139492312 - MIR SINE MIR -22 240 37 893 179 11 17 chr10 6097286 6097568 -139491720 + MER1B DNA MER1_type 1 339 0 256 291 22 82 chr10 6099468 6099650 -139489638 - MIR3 SINE MIR -3 205 35 284 246 16 0 chr10 6099752 6099813 -139489475 - MIR SINE MIR -105 157 96 2440 80 0 0 chr10 6100204 6100505 -139488783 - AluSx SINE Alu -11 301 1 180 228 0 0 chr10 6100818 6100875 -139488413 + (CACG)n Simple_repeat Simple_repeat 2 58 0 1996 137 3 20 chr10 6102524 6102830 -139486458 + AluJb SINE Alu 2 302 -10 2119 104 28 7 chr10 6103392 6103681 -139485607 + AluSp SINE Alu 1 295 -18 1004 230 59 45 chr10 6104601 6104975 -139484313 + L1MB5 LINE L1 5795 6173 -1 217 186 12 12 chr10 6106137 6106223 -139483065 + (CA)n Simple_repeat Simple_repeat 1 86 0 264 272 11 11 chr10 6106244 6106336 -139482952 + (CA)n Simple_repeat Simple_repeat 2 93 0 252 0 0 0 chr10 6106338 6106366 -139482922 + (CAG)n Simple_repeat Simple_repeat 2 29 0 1941 146 0 4 chr10 6106912 6107192 -139482096 + AluJo SINE Alu 7 285 -27 225 94 0 0 chr10 6107206 6107238 -139482050 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 446 127 0 0 chr10 6107429 6107500 -139481788 + FLAM SINE Alu 58 128 -15 670 141 29 106 chr10 6108465 6108576 -139480712 + L1MB3 LINE L1 6027 6123 -60 2185 101 0 14 chr10 6108576 6108899 -139480389 + AluSx SINE Alu 1 319 0 670 141 29 106 chr10 6108899 6108956 -139480332 + L1MB3 LINE L1 6123 6183 0 421 251 48 18 chr10 6111388 6111555 -139477733 - MER5B DNA MER1_type -2 176 5 260 203 18 74 chr10 6111823 6111986 -139477302 + (CCCCAG)n Simple_repeat Simple_repeat 5 158 0 760 181 17 23 chr10 6112615 6112792 -139476496 + L1PA16 LINE L1 5991 6166 0 1877 137 27 21 chr10 6112870 6113205 -139476083 - MER1B DNA MER1_type 0 337 1 1433 156 71 7 chr10 6113786 6114055 -139475233 - AluJo SINE Alu -25 287 2 876 149 0 0 chr10 6114508 6114649 -139474639 + FLAM_C SINE Alu 1 141 -2 336 45 0 0 chr10 6116249 6116293 -139472995 + tRNA-Cys-TGC tRNA tRNA 1 44 -31 920 74 16 0 chr10 6116302 6116424 -139472864 + AluYb8 SINE Alu 3 126 -192 313 164 30 30 chr10 6116425 6116492 -139472796 + AluY SINE Alu 76 142 -159 313 164 30 30 chr10 6116475 6116542 -139472746 + AluY SINE Alu 76 142 -159 313 164 30 30 chr10 6116525 6116592 -139472696 + AluY SINE Alu 76 142 -159 313 164 30 30 chr10 6116575 6116642 -139472646 + AluY SINE Alu 76 142 -159 313 164 30 30 chr10 6116625 6116692 -139472596 + AluY SINE Alu 76 142 -159 304 142 63 24 chr10 6116675 6116725 -139472563 + AluSc SINE Alu 76 99 -200 * 1815 64 8 0 chr10 6116725 6116959 -139472329 + AluY SINE Alu 76 311 0 304 142 63 24 chr10 6116959 6116989 -139472299 + AluSc SINE Alu 99 126 -173 2169 79 41 0 chr10 6117256 6117547 -139471741 + AluY SINE Alu 1 303 -8 1808 103 38 0 chr10 6117571 6117834 -139471454 + AluSq SINE Alu 29 301 -12 198 0 0 0 chr10 6118914 6118936 -139470352 + (A)n Simple_repeat Simple_repeat 1 22 0 1645 150 31 14 chr10 6118936 6119223 -139470065 + AluJo SINE Alu 1 292 -20 1552 164 0 69 chr10 6119716 6119858 -139469430 + AluJo SINE Alu 1 151 -167 207 0 0 0 chr10 6119858 6119881 -139469407 + (TCTCCC)n Simple_repeat Simple_repeat 1 23 0 9831 33 16 103 chr10 6119881 6121333 -139467955 + SVA Other Other 57 1382 -4 1552 164 0 69 chr10 6121333 6121528 -139467760 + AluJo SINE Alu 149 318 0 2292 106 0 0 chr10 6121615 6121927 -139467361 + AluSx SINE Alu 1 312 0 22 35 0 0 chr10 6123171 6123200 -139466088 + GC_rich Low_complexity Low_complexity 1 29 0 330 311 8 0 chr10 6123382 6123501 -139465787 + GA-rich Low_complexity Low_complexity 2 121 0 35 83 0 0 chr10 6123799 6123883 -139465405 + GC_rich Low_complexity Low_complexity 1 84 0 23 33 0 0 chr10 6124137 6124167 -139465121 + GC_rich Low_complexity Low_complexity 1 30 0 254 269 16 44 chr10 6125714 6125896 -139463392 + (CCCCG)n Simple_repeat Simple_repeat 2 178 0 * 303 243 0 58 chr10 6125814 6125917 -139463371 + C-rich Low_complexity Low_complexity 6 102 0 22 0 0 0 chr10 6126621 6126643 -139462645 + GC_rich Low_complexity Low_complexity 1 22 0 212 292 19 97 chr10 6127085 6127239 -139462049 - MIR3 SINE MIR -3 205 64 1631 143 10 67 chr10 6127497 6127811 -139461477 + AluJb SINE Alu 7 302 -10 961 144 24 0 chr10 6128343 6128510 -139460778 + L1MC1 LINE L1 5682 5852 -481 2267 97 0 0 chr10 6128511 6128801 -139460487 + AluSx SINE Alu 1 290 -22 1657 129 0 12 chr10 6129017 6129273 -139460015 - AluSx SINE Alu 0 312 60 436 313 56 28 chr10 6129283 6129462 -139459826 + L1 LINE L1 3589 3772 -2374 959 166 57 26 chr10 6129462 6129655 -139459633 + Tigger2a DNA MER2_type 1 199 -235 1735 146 3 7 chr10 6129762 6130016 -139459272 - Tigger3(Golem) DNA MER2_type 0 3028 2773 1938 116 29 0 chr10 6130016 6130316 -139458972 + AluSx SINE Alu 1 308 0 1735 146 3 7 chr10 6130316 6130348 -139458940 - Tigger3(Golem) DNA MER2_type -255 2773 2742 721 155 0 9 chr10 6130350 6130466 -139458822 + AluJ SINE Alu 1 115 -197 2038 147 99 27 chr10 6130466 6130967 -139458321 + MLT2A2 LTR ERVL 2 554 0 1238 127 5 20 chr10 6130967 6131164 -139458124 + AluJ SINE Alu 110 303 -9 2119 124 3 0 chr10 6132124 6132431 -139456857 + AluSx SINE Alu 4 311 -1 410 331 127 19 chr10 6132552 6132875 -139456413 - L3 LINE CR1 -28 1549 1192 1264 177 88 113 chr10 6133270 6133723 -139455565 + LTR7 LTR ERV1 1 442 -8 349 325 68 0 chr10 6133747 6133864 -139455424 + L2 LINE L2 3148 3272 0 1465 176 21 35 chr10 6133910 6134223 -139455065 - AluJo SINE Alu 0 309 1 193 366 37 12 chr10 6134334 6134416 -139454872 + MIR SINE MIR 129 212 -50 414 0 0 0 chr10 6134579 6134625 -139454663 + (CA)n Simple_repeat Simple_repeat 2 47 0 243 88 0 0 chr10 6134905 6134939 -139454349 + (A)n Simple_repeat Simple_repeat 1 34 0 387 0 0 0 chr10 6135103 6135146 -139454142 + (TG)n Simple_repeat Simple_repeat 2 44 0 184 337 12 12 chr10 6135331 6135414 -139453874 + L3 LINE CR1 1111 1193 -384 183 358 62 0 chr10 6135702 6135783 -139453505 + MIR SINE MIR 43 128 -80 1750 160 0 10 chr10 6136203 6136497 -139452791 + AluSx SINE Alu 1 291 -21 341 203 14 14 chr10 6136550 6136624 -139452664 + L1MC4 LINE L1 6919 6992 -1050 802 175 7 7 chr10 6136624 6136761 -139452527 - FLAM_C SINE Alu -2 141 5 2244 214 65 93 chr10 6136762 6137041 -139452247 + L1MC4 LINE L1 6976 7261 -781 2238 107 0 0 chr10 6137041 6137341 -139451947 + AluSx SINE Alu 1 300 -12 2244 214 65 93 chr10 6137341 6137470 -139451818 + L1MC4 LINE L1 7261 7392 -650 2327 80 0 0 chr10 6137470 6137770 -139451518 + AluSx SINE Alu 1 300 -12 2244 214 65 93 chr10 6137770 6137964 -139451324 + L1MC4 LINE L1 7392 7590 -452 2437 192 29 27 chr10 6137964 6138145 -139451143 + L1MB2 LINE L1 5646 5825 -346 2435 57 0 16 chr10 6138145 6138460 -139450828 + AluY SINE Alu 2 311 0 2437 192 29 27 chr10 6138460 6138800 -139450488 + L1MB2 LINE L1 5825 6168 -3 2244 214 65 93 chr10 6138800 6139151 -139450137 + L1MC4 LINE L1 7590 7904 -138 183 80 0 0 chr10 6139188 6139213 -139450075 + (CA)n Simple_repeat Simple_repeat 2 26 0 342 115 0 0 chr10 6139273 6139325 -139449963 + (TAGA)n Simple_repeat Simple_repeat 1 52 0 479 200 61 9 chr10 6139336 6139451 -139449837 + L1MC4 LINE L1 7918 8038 -4 1923 141 0 16 chr10 6139897 6140201 -139449087 - AluSx SINE Alu -13 299 1 463 281 113 20 chr10 6140201 6140404 -139448884 - MLT1J LTR MaLR -289 222 1 952 112 8 0 chr10 6140482 6140616 -139448672 + AluJo SINE Alu 1 135 -177 239 218 0 18 chr10 6141007 6141062 -139448226 + MLT1L LTR MaLR 556 609 -6 25 51 0 0 chr10 6141114 6141153 -139448135 + AT_rich Low_complexity Low_complexity 1 39 0 2339 86 3 0 chr10 6141340 6141643 -139447645 + AluSq SINE Alu 1 304 -9 655 157 10 0 chr10 6142379 6142481 -139446807 + FLAM_C SINE Alu 6 108 -35 2177 114 0 3 chr10 6142491 6142797 -139446491 + AluSq SINE Alu 4 308 -5 211 338 26 0 chr10 6142797 6142874 -139446414 + MER5B DNA MER1_type 33 111 -67 2062 139 0 0 chr10 6142907 6143217 -139446071 + AluSx SINE Alu 1 310 -2 2441 59 0 10 chr10 6143265 6143572 -139445716 + AluY SINE Alu 1 304 -7 215 79 26 0 chr10 6143600 6143638 -139445650 + (TA)n Simple_repeat Simple_repeat 2 40 0 751 94 0 0 chr10 6143646 6143742 -139445546 - AluS SINE Alu -215 97 2 2650 168 24 43 chr10 6145155 6145424 -139443864 - L1MB3 LINE L1 0 6183 5911 1650 160 76 0 chr10 6145424 6145712 -139443576 - AluJo SINE Alu -2 310 1 2650 168 24 43 chr10 6145712 6145932 -139443356 - L1MB3 LINE L1 -272 5911 5702 1318 225 13 22 chr10 6145932 6146243 -139443045 + AluJo SINE Alu 1 308 -4 2650 168 24 43 chr10 6146243 6146289 -139442999 - L1MB3 LINE L1 -481 5702 5657 1726 176 13 0 chr10 6146490 6146791 -139442497 + AluJo SINE Alu 5 309 -3 340 280 75 0 chr10 6146803 6146896 -139442392 + L1ME4a LINE L1 5964 6063 -58 183 129 0 0 chr10 6147008 6147039 -139442249 + (TCCA)n Simple_repeat Simple_repeat 4 34 0 913 106 8 8 chr10 6147062 6147194 -139442094 - FLAM_C SINE Alu -1 132 1 400 236 8 79 chr10 6147978 6148105 -139441183 + MIR SINE MIR 35 152 -110 236 345 159 0 chr10 6148152 6148297 -139440991 - MIR SINE MIR 0 262 95 2128 93 23 13 chr10 6149433 6149919 -139439369 + AluSq SINE Alu 1 313 0 1435 165 85 0 chr10 6150574 6150834 -139438454 + AluJo SINE Alu 1 282 -30 997 296 173 18 chr10 6150878 6151544 -139437744 - L1ME3A LINE L1 -54 6116 5348 284 314 51 7 chr10 6151675 6151812 -139437476 + MIR SINE MIR 16 158 -104 1899 123 23 13 chr10 6152148 6152456 -139436832 + AluSq SINE Alu 3 313 0 260 191 0 0 chr10 6153060 6153107 -139436181 - MIR3 SINE MIR -54 154 108 257 266 41 101 chr10 6154047 6154314 -139434974 - L2 LINE L2 -185 3087 2837 1667 149 0 0 chr10 6154421 6154669 -139434619 - AluJb SINE Alu -15 297 50 371 320 29 0 chr10 6154669 6154772 -139434516 + MIR SINE MIR 69 174 -88 321 206 119 44 chr10 6155428 6155565 -139433723 - Charlie7 DNA MER1_type -4 2608 2456 1757 173 16 0 chr10 6155565 6155871 -139433417 + AluJo SINE Alu 1 311 -1 321 206 119 44 chr10 6155871 6155893 -139433395 - Charlie7 DNA MER1_type -156 2456 2437 2154 77 3 71 chr10 6155903 6156239 -139433049 + AluSp SINE Alu 1 313 0 671 171 106 0 chr10 6156681 6156804 -139432484 - AluJo SINE Alu -176 136 1 2045 103 14 3 chr10 6157999 6158289 -139430999 + AluSx SINE Alu 1 293 -19 444 262 0 16 chr10 6158784 6158910 -139430378 - MIR SINE MIR -126 136 13 2080 106 33 0 chr10 6160133 6160435 -139428853 + AluSp SINE Alu 1 312 -1 586 101 114 95 chr10 6160820 6160860 -139428428 + L1PA13 LINE L1 6001 6039 -124 1778 143 61 0 chr10 6160860 6160977 -139428311 + AluSx SINE Alu 1 109 -203 2138 88 3 7 chr10 6160977 6161272 -139428016 + AluSx SINE Alu 8 301 -11 1778 143 61 0 chr10 6161272 6161448 -139427840 + AluSx SINE Alu 109 312 0 586 101 114 95 chr10 6161448 6161565 -139427723 + L1PA13 LINE L1 6039 6161 -2 3779 183 45 51 chr10 6161793 6162754 -139426534 + LTR5 LTR ERVK 1 955 -14 405 278 30 0 chr10 6162768 6162901 -139426387 - L3 LINE CR1 -308 1269 1133 22 70 0 0 chr10 6163544 6163587 -139425701 + GC_rich Low_complexity Low_complexity 1 43 0 1640 233 79 56 chr10 6164205 6164850 -139424438 + L1MC4a LINE L1 6507 7166 -642 2799 159 43 0 chr10 6164862 6165379 -139423909 + L1MB3 LINE L1 5643 6181 -2 1124 181 0 23 chr10 6165389 6165604 -139423684 + AluJo SINE Alu 73 282 -30 326 200 0 0 chr10 6165608 6165663 -139423625 + L1MC4 LINE L1 6649 6703 -1339 * 341 278 40 32 chr10 6165634 6165760 -139423528 + L1MCa LINE L1 1996 2122 -4304 235 114 38 152 chr10 6165773 6165878 -139423410 + L1MC4a LINE L1 7160 7252 -556 258 187 120 27 chr10 6165933 6166008 -139423280 - L2 LINE L2 -348 2965 2884 1983 131 3 6 chr10 6166013 6166325 -139422963 + AluSq SINE Alu 1 311 -2 277 223 62 9 chr10 6166395 6166507 -139422781 - L1MC4 LINE L1 0 8042 7925 2166 89 7 10 chr10 6166510 6166812 -139422476 - AluSx SINE Alu -9 303 3 1512 189 38 0 chr10 6167191 6167482 -139421806 + AluJb SINE Alu 1 302 -10 2024 95 29 13 chr10 6167525 6167831 -139421457 - AluSp SINE Alu 0 313 3 342 145 0 32 chr10 6167834 6167896 -139421392 - FAM SINE Alu -1 178 119 1741 102 8 0 chr10 6168033 6168269 -139421019 + AluSx SINE Alu 16 253 -59 26 64 0 0 chr10 6168269 6168316 -139420972 + AT_rich Low_complexity Low_complexity 1 47 0 2065 107 0 3 chr10 6168528 6168817 -139420471 - AluSx SINE Alu -24 288 1 21 0 0 0 chr10 6168817 6168838 -139420450 + AT_rich Low_complexity Low_complexity 1 21 0 825 142 0 8 chr10 6168838 6168972 -139420316 - AluSq/x SINE Alu -179 133 1 189 0 0 0 chr10 6169730 6169751 -139419537 + (A)n Simple_repeat Simple_repeat 1 21 0 225 208 21 0 chr10 6170677 6170725 -139418563 + (TATATG)n Simple_repeat Simple_repeat 2 50 0 1600 154 35 3 chr10 6170766 6171051 -139418237 - AluJb SINE Alu -18 294 1 2058 129 0 7 chr10 6171374 6171683 -139417605 - AluSg SINE Alu -3 307 1 872 81 16 0 chr10 6171689 6171813 -139417475 - L1PB1 LINE L1 -3 6148 6023 742 136 8 0 chr10 6171814 6171932 -139417356 - L1PB1 LINE L1 -76 6075 5957 239 327 243 22 chr10 6172211 6172483 -139416805 - L2 LINE L2 -63 3209 2878 184 293 338 6 chr10 6172684 6172841 -139416447 - MIR SINE MIR -6 256 48 2255 95 0 3 chr10 6174010 6174314 -139414974 - AluSx SINE Alu -9 303 1 299 244 61 0 chr10 6174593 6174675 -139414613 + MIR3 SINE MIR 122 208 0 1635 164 10 7 chr10 6175395 6175688 -139413600 - AluSx SINE Alu -18 294 1 194 342 53 13 chr10 6175870 6175946 -139413342 - L2 LINE L2 -62 3210 3132 354 349 34 34 chr10 6176188 6176363 -139412925 + MER5B DNA MER1_type 2 176 -2 299 269 186 26 chr10 6176430 6176586 -139412702 - MER5A DNA MER1_type 0 189 9 826 163 0 15 chr10 6176663 6176798 -139412490 + FLAM_C SINE Alu 1 133 0 815 128 0 0 chr10 6177866 6177983 -139411305 + FLAM_C SINE Alu 2 118 -15 23 33 0 0 chr10 6177983 6178013 -139411275 + AT_rich Low_complexity Low_complexity 1 30 0 372 330 92 42 chr10 6178253 6178492 -139410796 - MIR SINE MIR -10 252 2 395 213 117 0 chr10 6179182 6179276 -139410012 - L2 LINE L2 0 3272 3168 234 0 0 0 chr10 6179816 6179842 -139409446 + (TA)n Simple_repeat Simple_repeat 1 26 0 2199 84 7 3 chr10 6179842 6180141 -139409147 + AluSx SINE Alu 2 301 -11 216 0 0 0 chr10 6180141 6180165 -139409123 + (TA)n Simple_repeat Simple_repeat 2 25 0 1965 101 7 30 chr10 6181009 6181306 -139407982 - AluSx SINE Alu -22 290 1 290 262 78 10 chr10 6181309 6181412 -139407876 - MIR SINE MIR -115 147 38 2667 149 22 65 chr10 6182145 6182681 -139406607 + MLT2B2 LTR ERVL 3 515 0 319 321 136 0 chr10 6183022 6183162 -139406126 + MIR SINE MIR 93 251 -11 354 280 92 48 chr10 6183203 6183474 -139405814 + L2 LINE L2 2298 2580 -734 618 263 26 7 chr10 6183609 6183761 -139405527 + MIR SINE MIR 14 168 -94 268 173 27 55 chr10 6183789 6183899 -139405389 + (TTATA)n Simple_repeat Simple_repeat 5 111 0 34 24 0 0 chr10 6183968 6184009 -139405279 + AT_rich Low_complexity Low_complexity 1 41 0 189 292 62 0 chr10 6184592 6184640 -139404648 + MIR3 SINE MIR 157 207 -1 367 259 54 9 chr10 6184736 6184848 -139404440 - Charlie8 DNA MER1_type -1211 1206 1090 2422 175 24 37 chr10 6186993 6187485 -139401803 + MER66B LTR ERV1 1 486 0 28 0 0 0 chr10 6187770 6187798 -139401490 + AT_rich Low_complexity Low_complexity 1 28 0 2042 132 3 0 chr10 6187924 6188234 -139401054 + AluSx SINE Alu 2 312 0 868 277 79 38 chr10 6188357 6189041 -139400247 - L1ME3A LINE L1 -227 6337 5632 428 309 77 47 chr10 6189037 6189532 -139399756 - L1ME3A LINE L1 -1892 4648 4139 * 225 264 81 34 chr10 6189805 6189953 -139399335 - L1ME3A LINE L1 -3758 2782 2628 420 269 82 68 chr10 6189984 6190223 -139399065 - L1MEc LINE L1 -3926 2622 2371 2288 70 10 3 chr10 6190246 6190547 -139398741 + AluY SINE Alu 1 303 -8 462 338 61 19 chr10 6190677 6190890 -139398398 - L1M4 LINE L1 -1759 4387 4166 465 263 90 75 chr10 6192095 6192681 -139396607 - L1M4 LINE L1 -3424 2722 2128 554 272 125 0 chr10 6193083 6193267 -139396021 + MIR SINE MIR 56 262 0 591 232 137 42 chr10 6193463 6193631 -139395657 + MIR3 SINE MIR 20 203 -5 246 322 44 0 chr10 6194652 6194742 -139394546 + MER5A DNA MER1_type 9 102 -87 209 266 101 13 chr10 6195350 6195429 -139393859 + MIR SINE MIR 20 105 -103 361 220 13 0 chr10 6197750 6197838 -139391450 - L1ME2 LINE L1 -10 6223 6144 1037 254 38 38 chr10 6197847 6198317 -139390971 - L1ME2 LINE L1 -142 6091 5654 662 128 0 0 chr10 6198342 6198444 -139390844 - AluSx SINE Alu -2 308 207 819 156 0 0 chr10 6198444 6198566 -139390722 - AluSx SINE Alu -191 122 1 1426 233 88 67 chr10 6198570 6198939 -139390349 - L1ME2 LINE L1 -577 5656 5296 2350 77 0 3 chr10 6198939 6199250 -139390038 - AluY SINE Alu -1 310 1 1426 233 88 67 chr10 6199250 6199727 -139389561 - L1ME2 LINE L1 -937 5296 4794 430 250 127 26 chr10 6199850 6200030 -139389258 - L1ME2 LINE L1 -1648 4567 4350 717 45 0 0 chr10 6200030 6200119 -139389169 + (TA)n Simple_repeat Simple_repeat 2 90 0 430 250 127 26 chr10 6200119 6200206 -139389082 - L1ME2 LINE L1 -1865 4350 4273 3027 277 71 12 chr10 6200206 6201493 -139387795 - L1ME2 LINE L1 -3913 2483 1122 347 280 8 42 chr10 6201505 6201557 -139387731 - L1ME2 LINE L1 -5179 1026 974 2165 116 0 0 chr10 6201557 6201850 -139387438 + AluSx SINE Alu 1 293 -19 347 280 8 42 chr10 6201850 6201915 -139387373 - L1ME2 LINE L1 -5231 974 913 951 178 55 55 chr10 6201924 6202104 -139387184 - MER58A DNA MER1_type -2201 219 36 2062 104 0 0 chr10 6202104 6202439 -139386849 + AluSq SINE Alu 8 342 0 951 178 55 55 chr10 6202439 6202476 -139386812 - MER58A DNA MER1_type -2383 37 1 354 243 46 99 chr10 6202489 6202555 -139386733 - L1ME2 LINE L1 -5449 947 879 1729 129 42 17 chr10 6202555 6202842 -139386446 - AluSx SINE Alu -14 298 5 354 243 46 99 chr10 6202842 6203079 -139386209 - L1ME2 LINE L1 -5517 879 660 571 265 38 25 chr10 6203389 6203627 -139385661 - L1ME2 LINE L1 -6122 274 34 215 339 148 17 chr10 6203862 6204074 -139385214 - MIR3 SINE MIR -6 256 15 2014 114 0 14 chr10 6204225 6204522 -139384766 - AluSx SINE Alu -19 293 1 2099 114 0 7 chr10 6205889 6206188 -139383100 - AluSx SINE Alu -15 297 1 1581 146 8 0 chr10 6206194 6206447 -139382841 - AluSx SINE Alu -14 298 44 1015 146 0 12 chr10 6206447 6206611 -139382677 - AluJb SINE Alu -150 162 1 180 188 0 59 chr10 6206882 6206983 -139382305 + (CATA)n Simple_repeat Simple_repeat 4 98 0 188 289 103 21 chr10 6207044 6207141 -139382147 + L2 LINE L2 3209 3313 0 1975 127 3 19 chr10 6207926 6208241 -139381047 + AluSx SINE Alu 1 310 -2 287 292 144 26 chr10 6208332 6208490 -139380798 - MIR SINE MIR -50 212 43 183 302 16 0 chr10 6209691 6209754 -139379534 + L2 LINE L2 3250 3313 0 234 242 12 121 chr10 6210129 6210285 -139379003 + MIR3 SINE MIR 40 180 -28 210 143 0 0 chr10 6210598 6210633 -139378655 + (CA)n Simple_repeat Simple_repeat 1 35 0 2246 76 14 0 chr10 6210729 6211019 -139378269 + AluSq SINE Alu 1 294 -19 798 172 0 0 chr10 6212189 6212730 -139376558 + (TTGG)n Simple_repeat Simple_repeat 1 541 0 2088 115 0 7 chr10 6213685 6213989 -139375299 + AluSx SINE Alu 2 303 -9 2269 100 3 3 chr10 6214691 6214990 -139374298 + AluSq SINE Alu 3 301 -12 186 167 28 0 chr10 6215017 6215053 -139374235 + MER5B DNA MER1_type 88 124 -54 1127 173 138 27 chr10 6215057 6215113 -139374175 - L1MB5 LINE L1 0 6174 6126 1735 158 69 91 chr10 6215113 6215518 -139373770 - MSTD LTR MaLR 0 396 1 1127 173 138 27 chr10 6215518 6215721 -139373567 - L1MB5 LINE L1 -48 6126 5886 181 228 0 70 chr10 6215728 6215785 -139373503 + MER5B DNA MER1_type 122 174 -4 230 218 0 36 chr10 6215796 6215839 -139373449 - MER5A DNA MER1_type 0 189 147 840 127 0 8 chr10 6215839 6215973 -139373315 + L1MA5A LINE L1 6160 6292 -5 230 218 0 36 chr10 6215973 6215984 -139373304 - MER5A DNA MER1_type -42 147 137 775 201 13 0 chr10 6215984 6216143 -139373145 - MER5A DNA MER1_type -28 161 1 2203 124 0 0 chr10 6216182 6216481 -139372807 + AluSx SINE Alu 14 312 0 1728 197 64 33 chr10 6217332 6217443 -139371845 - MER63B DNA MER1_type -628 434 328 1578 185 49 3 chr10 6217443 6217729 -139371559 + AluJo SINE Alu 1 299 -13 1728 197 64 33 chr10 6217729 6218038 -139371250 - MER63B DNA MER1_type -734 328 1 1049 140 45 30 chr10 6218134 6218334 -139370954 - MER3 DNA MER1_type -6 203 1 1245 103 0 0 chr10 6218434 6218589 -139370699 + AluSg SINE Alu 1 155 -155 213 196 43 0 chr10 6219636 6219682 -139369606 + GA-rich Low_complexity Low_complexity 3 50 0 1883 154 7 0 chr10 6219721 6220013 -139369275 + AluJo SINE Alu 1 294 -18 671 225 40 12 chr10 6220052 6220225 -139369063 - MER5A DNA MER1_type -11 178 1 654 233 15 0 chr10 6220680 6220813 -139368475 + Charlie1 DNA MER1_type 57 191 -2570 350 175 6 129 chr10 6220811 6220955 -139368333 + Charlie1 DNA MER1_type 2573 2694 -67 * 2310 106 6 0 chr10 6220955 6221266 -139368022 - AluSq SINE Alu 0 313 1 350 175 6 129 chr10 6221266 6221292 -139367996 + Charlie1 DNA MER1_type 2694 2722 -39 2642 177 107 35 chr10 6221318 6221681 -139367607 + L1MB5 LINE L1 5366 5701 -463 2101 112 3 32 chr10 6221681 6221994 -139367294 + AluSx SINE Alu 1 304 -8 2642 177 107 35 chr10 6221994 6222356 -139366932 + L1MB5 LINE L1 5701 6163 -1 3263 191 20 30 chr10 6222760 6223140 -139366148 + L1MCa LINE L1 84 466 -5441 1319 162 199 39 chr10 6223140 6223528 -139365760 - LTR7 LTR ERV1 0 450 1 3263 191 20 30 chr10 6223528 6224227 -139365061 + L1MCa LINE L1 466 935 -4972 937 281 82 24 chr10 6224241 6224404 -139364884 + MLT1J LTR MaLR 1 153 -358 5234 120 24 31 chr10 6224404 6225282 -139364006 - MER4D LTR ERV1 0 872 1 937 281 82 24 chr10 6225282 6225535 -139363753 + MLT1J LTR MaLR 153 441 -70 4321 85 2 0 chr10 6225639 6226192 -139363096 - MER41A LTR ERV1 0 554 1 2000 175 34 11 chr10 6226192 6226565 -139362723 + MSTB1 LTR MaLR 10 394 -38 1185 82 19 0 chr10 6226566 6226724 -139362564 + AluSc SINE Alu 134 294 -15 219 69 0 0 chr10 6226724 6226753 -139362535 + (GA)n Simple_repeat Simple_repeat 1 29 0 1112 73 11 17 chr10 6226773 6226952 -139362336 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 324 61 0 61 chr10 6226952 6227001 -139362287 + MSTB1 LTR MaLR 412 457 0 1897 171 14 26 chr10 6227571 6227692 -139361596 + MER7A DNA MER2_type 2 123 -2915 1985 133 7 0 chr10 6227692 6227995 -139361293 + AluSx SINE Alu 1 305 0 1897 171 14 26 chr10 6227995 6228223 -139361065 + MER7A DNA MER2_type 123 346 0 261 301 126 79 chr10 6228266 6228608 -139360680 - MLT1K LTR MaLR -97 491 134 780 228 95 30 chr10 6228610 6228679 -139360609 + L1MCa LINE L1 1650 1713 -4894 2151 135 3 0 chr10 6228679 6228976 -139360312 + AluSx SINE Alu 1 298 -14 780 228 95 30 chr10 6228976 6229169 -139360119 + L1MCa LINE L1 1713 1929 -4678 1069 202 50 60 chr10 6229186 6229413 -139359875 + MLT1C LTR MaLR 6 231 -236 1726 177 3 10 chr10 6229413 6229712 -139359576 - AluSx SINE Alu -15 297 1 1069 202 50 60 chr10 6229712 6229766 -139359522 + MLT1C LTR MaLR 231 284 -183 379 225 15 36 chr10 6229771 6229881 -139359407 + L1ME1 LINE L1 5894 6016 -148 * 421 232 62 9 chr10 6229879 6229991 -139359297 + L1MA10 LINE L1 6210 6327 -7 227 190 52 0 chr10 6229997 6230055 -139359233 + LTR33A LTR ERVL 459 519 -4 429 20 0 0 chr10 6230189 6230239 -139359049 + (CA)n Simple_repeat Simple_repeat 1 50 0 315 0 0 0 chr10 6230288 6230323 -139358965 + (CA)n Simple_repeat Simple_repeat 2 36 0 384 22 0 0 chr10 6230385 6230430 -139358858 + (CA)n Simple_repeat Simple_repeat 2 46 0 297 0 0 0 chr10 6230479 6230512 -139358776 + (CA)n Simple_repeat Simple_repeat 2 34 0 225 0 0 0 chr10 6230574 6230599 -139358689 + (CA)n Simple_repeat Simple_repeat 2 26 0 414 0 0 0 chr10 6230650 6230696 -139358592 + (CA)n Simple_repeat Simple_repeat 2 47 0 412 179 12 0 chr10 6232418 6232502 -139356786 - L1PA16 LINE L1 -2 6164 6080 2139 125 20 0 chr10 6232543 6232847 -139356441 + AluSx SINE Alu 1 310 -2 1666 176 42 3 chr10 6233093 6233377 -139355911 + AluSx SINE Alu 5 299 -13 2728 45 0 0 chr10 6233380 6233690 -139355598 + AluY SINE Alu 1 310 -1 312 204 66 109 chr10 6233938 6234026 -139355262 - LTR67 LTR ERVL -424 133 52 2451 63 17 0 chr10 6234026 6234328 -139354960 + AluY SINE Alu 1 307 -4 312 204 66 109 chr10 6234328 6234376 -139354912 - LTR67 LTR ERVL -505 52 3 35 71 0 0 chr10 6234411 6234481 -139354807 + AT_rich Low_complexity Low_complexity 1 70 0 198 0 0 0 chr10 6235953 6235975 -139353313 + (T)n Simple_repeat Simple_repeat 1 22 0 243 286 143 10 chr10 6236754 6236852 -139352436 - L2 LINE L2 0 3272 3162 2265 115 0 0 chr10 6240208 6240504 -139348784 + AluSx SINE Alu 1 296 -16 219 228 140 0 chr10 6240512 6240569 -139348719 - MIR SINE MIR -123 85 21 225 0 0 0 chr10 6240972 6240997 -139348291 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 351 286 31 0 chr10 6241027 6241125 -139348163 + MER3 DNA MER1_type 13 113 -96 254 245 64 21 chr10 6242409 6242503 -139346785 - MER5B DNA MER1_type 0 178 81 221 351 43 21 chr10 6242618 6242712 -139346576 + L3b LINE CR1 1478 1573 -10 191 323 104 0 chr10 6243611 6243707 -139345581 - MIR SINE MIR -49 213 108 2217 126 7 0 chr10 6244162 6244464 -139344824 + AluSx SINE Alu 1 304 -8 2042 133 7 3 chr10 6244466 6244760 -139344528 + AluSx SINE Alu 1 295 -17 1072 128 199 0 chr10 6246361 6246557 -139342731 - MER46A DNA MER2_type 0 236 2 1768 169 32 0 chr10 6248852 6249136 -139340152 + AluJb SINE Alu 1 293 -19 352 206 78 20 chr10 6250084 6250186 -139339102 + L1ME LINE L1 5709 5816 -305 360 284 97 92 chr10 6251045 6251349 -139337939 - L1MC4 LINE L1 -109 7933 7632 198 71 0 0 chr10 6251349 6251377 -139337911 + (CAT)n Simple_repeat Simple_repeat 1 28 0 360 284 97 92 chr10 6251377 6251710 -139337578 - L1MC4 LINE L1 -410 7632 7293 2209 102 30 0 chr10 6251873 6252168 -139337120 - AluSx SINE Alu -8 304 1 241 261 185 0 chr10 6252212 6252277 -139337011 - MER2 DNA MER2_type -1 344 268 1295 158 10 5 chr10 6252304 6252513 -139336775 - MER2 DNA MER2_type -135 210 1 2096 88 95 0 chr10 6253096 6253380 -139335908 + AluY SINE Alu 1 311 0 557 215 75 45 chr10 6253394 6253594 -139335694 - L1MC5 LINE L1 -44 7917 7712 276 165 198 44 chr10 6253600 6253691 -139335597 - MER106B DNA MER1_type -5 1054 950 324 222 0 14 chr10 6253704 6253776 -139335512 - MER106A DNA MER1_type -164 72 2 1856 82 106 0 chr10 6254243 6254528 -139334760 - AluY SINE Alu 0 312 1 2139 118 7 3 chr10 6256431 6256735 -139332553 + AluSx SINE Alu 1 305 -7 285 278 0 14 chr10 6257363 6257435 -139331853 + AluY SINE Alu 214 284 -17 2170 123 7 10 chr10 6257652 6257962 -139331326 - AluSx SINE Alu -1 311 3 1783 175 3 0 chr10 6258068 6258360 -139330928 + AluJb SINE Alu 6 298 -14 712 205 56 0 chr10 6259151 6259312 -139329976 - MIR SINE MIR -4 258 89 1652 181 0 7 chr10 6259399 6259675 -139329613 + AluJo SINE Alu 1 274 -38 1460 103 0 10 chr10 6260057 6260252 -139329036 + AluSx SINE Alu 1 193 -119 2101 135 0 0 chr10 6261110 6261414 -139327874 + AluJb SINE Alu 1 304 -8 1569 198 54 50 chr10 6261933 6262023 -139327265 + MLT1C LTR MaLR 1 89 -378 2229 107 3 3 chr10 6262023 6262331 -139326957 - AluSg SINE Alu -2 308 1 1569 198 54 50 chr10 6262331 6262705 -139326583 + MLT1C LTR MaLR 89 467 0 2049 211 67 19 chr10 6262781 6263301 -139325987 + L1MD2 LINE L1 5813 6357 -2 3229 149 19 21 chr10 6263973 6264527 -139324761 - Tigger4(Zombi) DNA MER2_type 0 2731 2177 1988 150 0 16 chr10 6264527 6264841 -139324447 + AluJb SINE Alu 1 309 -3 4728 129 25 16 chr10 6265211 6265960 -139323328 - Tigger4(Zombi) DNA MER2_type -769 1962 1207 779 201 7 0 chr10 6265960 6266099 -139323189 + AluJo SINE Alu 24 163 -149 830 87 0 0 chr10 6266103 6266206 -139323082 - FLAM_C SINE Alu -40 103 1 2274 155 27 12 chr10 6266207 6266613 -139322675 - Tigger4(Zombi) DNA MER2_type -2319 412 1 2394 97 0 0 chr10 6266633 6266933 -139322355 - AluSx SINE Alu -12 300 1 21 57 0 0 chr10 6267307 6267342 -139321946 + AT_rich Low_complexity Low_complexity 1 35 0 414 276 34 63 chr10 6267345 6267584 -139321704 + L1ME LINE L1 5496 5727 -394 2162 121 3 10 chr10 6267926 6268239 -139321049 - AluSx SINE Alu -1 311 1 507 126 53 0 chr10 6268244 6268339 -139320949 - L1PA13 LINE L1 0 6163 6064 23 33 0 0 chr10 6268701 6268731 -139320557 + GC_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr10 6269364 6269386 -139319902 + GC_rich Low_complexity Low_complexity 1 22 0 2213 101 3 29 chr10 6270934 6271250 -139318038 - AluSg SINE Alu -2 308 1 603 218 12 42 chr10 6271257 6271275 -139318013 - L1MA10 LINE L1 0 6334 6317 1833 229 62 29 chr10 6271275 6271822 -139317466 - L1ME1 LINE L1 -6 6160 5596 520 206 0 11 chr10 6271822 6271914 -139317374 - AluJb SINE Alu -17 295 205 33 0 0 0 chr10 6271916 6271949 -139317339 + AT_rich Low_complexity Low_complexity 1 33 0 2328 116 0 0 chr10 6271949 6272260 -139317028 - AluSx SINE Alu -1 311 1 1144 217 56 11 chr10 6272266 6272552 -139316736 - L1ME1 LINE L1 -565 5601 5303 2022 112 0 0 chr10 6272563 6272830 -139316458 + AluSx SINE Alu 9 275 -37 1934 194 35 28 chr10 6272869 6273351 -139315937 - L1ME1 LINE L1 -849 5297 4832 841 225 34 41 chr10 6273352 6273619 -139315669 + L1M4 LINE L1 4290 4554 -1592 355 67 0 0 chr10 6274421 6274500 -139314788 + Alu SINE Alu 241 319 0 221 344 65 42 chr10 6274627 6274842 -139314446 - L2 LINE L2 -551 2763 2544 197 264 99 22 chr10 6275196 6275287 -139314001 + L2 LINE L2 3154 3251 -21 1490 156 13 0 chr10 6275851 6276166 -139313122 + AluJo SINE Alu 55 372 0 377 248 9 9 chr10 6276347 6276460 -139312828 + L1MEd LINE L1 89 201 -6004 1136 199 44 17 chr10 6276460 6276757 -139312531 + L1MEd LINE L1 1849 2153 -4243 * 1354 234 37 23 chr10 6276756 6277188 -139312100 + L1M4 LINE L1 4214 4651 -1495 1684 154 50 18 chr10 6277191 6277471 -139311817 + AluJo SINE Alu 1 289 -23 308 56 33 89 chr10 6277471 6277561 -139311727 + (TTTAA)n Simple_repeat Simple_repeat 1 85 0 479 268 43 39 chr10 6277572 6277826 -139311462 + L1M4 LINE L1 4586 4840 -1306 708 287 87 53 chr10 6277841 6278347 -139310941 + L1MCc LINE L1 716 1238 -5185 2142 115 3 3 chr10 6278782 6279078 -139310210 - AluSx SINE Alu -16 296 1 183 265 157 20 chr10 6279156 6279258 -139310030 + L2 LINE L2 3155 3270 -2 2325 95 0 0 chr10 6279352 6279637 -139309651 + AluSc SINE Alu 1 285 -24 387 60 0 0 chr10 6279639 6279689 -139309599 + (CAAGG)n Simple_repeat Simple_repeat 2 51 0 778 93 0 0 chr10 6279807 6279904 -139309384 + AluS SINE Alu 2 98 -214 1418 80 0 6 chr10 6279905 6280080 -139309208 - AluSq SINE Alu -53 260 87 2406 95 0 0 chr10 6280834 6281138 -139308150 + AluSx SINE Alu 1 304 -8 288 326 30 30 chr10 6281177 6281309 -139307979 + MIR SINE MIR 20 151 -111 1944 143 0 29 chr10 6282387 6282695 -139306593 + AluJo SINE Alu 1 299 -13 1311 262 91 12 chr10 6283386 6283814 -139305474 - LTR40b LTR ERVL 0 462 1 2304 117 0 0 chr10 6284245 6284545 -139304743 - AluSx SINE Alu -12 300 1 1712 153 0 67 chr10 6285439 6285640 -139303648 - AluJo SINE Alu -19 293 119 2272 119 0 3 chr10 6285640 6285943 -139303345 + AluSx SINE Alu 1 302 -10 1712 153 0 67 chr10 6285943 6286055 -139303233 - AluJo SINE Alu -193 119 1 907 119 8 15 chr10 6287550 6287684 -139301604 + FLAM_C SINE Alu 1 133 0 248 239 0 45 chr10 6287850 6287917 -139301371 + G-rich Low_complexity Low_complexity 4 67 0 1890 171 0 3 chr10 6288168 6288472 -139300816 + AluSx SINE Alu 1 303 -9 512 275 108 12 chr10 6288607 6288847 -139300441 - L1MC4a LINE L1 -1910 5898 5636 2200 126 3 0 chr10 6288963 6289272 -139300016 + AluSx SINE Alu 1 310 -2 2281 125 0 0 chr10 6289281 6289584 -139299704 + AluSg SINE Alu 1 303 -7 2312 109 0 31 chr10 6289594 6289915 -139299373 + AluSx SINE Alu 1 311 -1 2434 96 0 0 chr10 6290540 6290841 -139298447 + AluSx SINE Alu 1 301 -11 2284 101 3 0 chr10 6291456 6291753 -139297535 + AluSp SINE Alu 1 298 -15 842 152 0 45 chr10 6292261 6292393 -139296895 + FLAM_C SINE Alu 1 126 -17 831 157 64 7 chr10 6292450 6292590 -139296698 + AluSq/x SINE Alu 1 148 -165 544 138 0 0 chr10 6292598 6292692 -139296596 + AluJ/FRAM SINE Alu 216 309 -3 677 189 0 0 chr10 6293327 6293433 -139295855 - FLAM_C SINE Alu -36 107 2 363 259 54 45 chr10 6294772 6294884 -139294404 - MIR3 SINE MIR -43 165 53 886 150 0 0 chr10 6294897 6295022 -139294266 + AluJo SINE Alu 3 130 -182 1960 149 17 7 chr10 6295022 6295311 -139293977 - AluSx SINE Alu -20 292 1 903 145 45 73 chr10 6295513 6295683 -139293605 - AluSg/x SINE Alu -18 294 128 2269 104 0 16 chr10 6295683 6295999 -139293289 - AluY SINE Alu 0 311 1 411 243 27 70 chr10 6296061 6296246 -139293042 - MLT1H LTR MaLR -266 283 107 193 245 20 20 chr10 6296334 6296383 -139292905 + L2 LINE L2 3262 3310 -3 535 144 72 0 chr10 6296481 6296578 -139292710 + L1PA16 LINE L1 6058 6161 -5 2283 104 3 0 chr10 6296750 6297039 -139292249 - AluSx SINE Alu -21 291 2 26 30 0 0 chr10 6297931 6297964 -139291324 + AT_rich Low_complexity Low_complexity 1 33 0 2295 107 0 0 chr10 6297987 6298285 -139291003 + AluSx SINE Alu 1 298 -14 1895 138 24 3 chr10 6299175 6299464 -139289824 + AluJb SINE Alu 1 295 -17 2330 102 0 0 chr10 6300026 6300319 -139288969 - AluSx SINE Alu -19 293 1 866 163 12 25 chr10 6301279 6301439 -139287849 + FRAM SINE Alu 2 159 -17 351 357 85 5 chr10 6301832 6302056 -139287232 + MIR SINE MIR 12 253 -9 386 238 69 10 chr10 6302226 6302327 -139286961 + MLT1L LTR MaLR 170 276 -339 1039 275 67 73 chr10 6302334 6303003 -139286285 - PABL_B LTR ERV1 -2 665 1 2441 109 0 0 chr10 6303620 6303932 -139285356 + AluSx SINE Alu 1 312 0 1739 158 4 7 chr10 6305291 6305564 -139283724 + AluJo SINE Alu 26 297 -15 275 246 115 71 chr10 6305841 6306093 -139283195 - HAL1 LINE L1 0 2507 2245 1709 134 19 11 chr10 6306274 6306542 -139282746 - AluJo SINE Alu -42 270 1 388 270 44 73 chr10 6306544 6306650 -139282638 - HAL1 LINE L1 -1120 1387 1288 2343 87 0 0 chr10 6306650 6306939 -139282349 + AluY SINE Alu 1 289 -22 388 270 44 73 chr10 6306939 6307036 -139282252 - HAL1 LINE L1 -1219 1288 1190 232 167 0 0 chr10 6307036 6307084 -139282204 - Alu SINE Alu 0 302 255 2273 97 0 0 chr10 6307220 6307509 -139281779 + AluY SINE Alu 1 289 -22 391 249 118 70 chr10 6307535 6307600 -139281688 - HAL1 LINE L1 -1246 1261 1201 1920 144 37 3 chr10 6307600 6307899 -139281389 - AluSx SINE Alu -3 309 1 391 249 118 70 chr10 6307899 6308037 -139281251 - HAL1 LINE L1 -1306 1201 1071 1649 93 19 5 chr10 6308037 6308252 -139281036 - AluSx SINE Alu -94 218 1 391 249 118 70 chr10 6308252 6308445 -139280843 - HAL1 LINE L1 -1436 1071 845 222 37 0 0 chr10 6308502 6308529 -139280759 + (CA)n Simple_repeat Simple_repeat 2 28 0 205 291 204 67 chr10 6308637 6309206 -139280082 + L2 LINE L2 1866 2546 -768 883 216 22 0 chr10 6309206 6309391 -139279897 - MER5A DNA MER1_type 0 189 1 205 291 204 67 chr10 6309391 6309508 -139279780 + L2 LINE L2 2546 2646 -668 626 168 62 62 chr10 6309514 6309675 -139279613 - AluJb SINE Alu -18 294 134 28 48 0 0 chr10 6309867 6309909 -139279379 + AT_rich Low_complexity Low_complexity 1 42 0 23 0 0 0 chr10 6311175 6311198 -139278090 + AT_rich Low_complexity Low_complexity 1 23 0 317 342 90 0 chr10 6311390 6311545 -139277743 + MIR SINE MIR 75 243 -19 311 283 91 0 chr10 6312121 6312220 -139277068 - L1ME LINE L1 -343 5778 5671 256 248 62 69 chr10 6312282 6312427 -139276861 + MER112 DNA MER1_type 66 209 -51 21 0 0 0 chr10 6312428 6312449 -139276839 + AT_rich Low_complexity Low_complexity 1 21 0 1510 151 120 8 chr10 6312456 6312714 -139276574 + AluSg1 SINE Alu 14 300 -9 2193 115 3 16 chr10 6312747 6313060 -139276228 + AluSx SINE Alu 1 309 -3 2018 142 0 29 chr10 6313473 6313782 -139275506 + AluSx SINE Alu 1 300 -12 2304 120 0 0 chr10 6314018 6314319 -139274969 - AluSx SINE Alu -11 301 1 792 254 65 65 chr10 6314324 6314408 -139274880 + L1MC4a LINE L1 5520 5603 -2205 1819 156 7 3 chr10 6314408 6314712 -139274576 + AluJb SINE Alu 1 305 0 792 254 65 65 chr10 6314712 6314965 -139274323 + L1MC4a LINE L1 5602 5858 -1950 312 291 156 33 chr10 6315033 6315261 -139274027 + L1MC4a LINE L1 5848 6047 -1761 1955 160 0 10 chr10 6315261 6315561 -139273727 - AluSx SINE Alu -13 299 3 312 291 156 33 chr10 6315561 6315754 -139273534 + L1MC4a LINE L1 6047 6321 -1487 1586 143 10 68 chr10 6316378 6316672 -139272616 + AluJb SINE Alu 17 293 -19 240 238 130 77 chr10 6316887 6317148 -139272140 + L1MC5 LINE L1 7303 7577 -384 915 262 23 0 chr10 6317657 6317871 -139271417 + MER58A DNA MER1_type 1 219 -5 428 289 78 8 chr10 6318206 6318334 -139270954 + L2 LINE L2 3161 3297 -16 2038 146 3 0 chr10 6318985 6319279 -139270009 + AluJo SINE Alu 11 305 -7 2378 108 0 3 chr10 6319328 6319635 -139269653 - AluSx SINE Alu -6 306 1 265 293 75 45 chr10 6320315 6320448 -139268840 - MIR3 SINE MIR -71 137 1 308 217 0 0 chr10 6320614 6320674 -139268614 + L1MB8 LINE L1 6101 6160 -18 2266 109 23 0 chr10 6321011 6321314 -139267974 + AluSx SINE Alu 1 310 -2 815 131 0 16 chr10 6321362 6321484 -139267804 + FLAM_C SINE Alu 9 128 -15 239 198 136 37 chr10 6322340 6322421 -139266867 - MIR SINE MIR -66 142 54 2169 115 10 0 chr10 6322559 6322855 -139266433 + AluSq SINE Alu 1 299 -14 396 280 10 0 chr10 6323189 6323289 -139265999 + MIR3 SINE MIR 8 108 -100 203 56 56 0 chr10 6323827 6323863 -139265425 + T-rich Low_complexity Low_complexity 3 40 0 2157 126 3 0 chr10 6324242 6324535 -139264753 + AluSx SINE Alu 1 294 -18 198 257 157 14 chr10 6325234 6325304 -139263984 + L2 LINE L2 3193 3272 0 366 271 90 23 chr10 6325359 6325532 -139263756 - MIR3 SINE MIR -64 144 6 3638 173 57 16 chr10 6326822 6327591 -139261697 + L1MC3 LINE L1 6967 7767 -18 1455 224 69 16 chr10 6327778 6327930 -139261358 - Charlie1 DNA MER1_type 0 2761 2619 2264 120 0 0 chr10 6327930 6328221 -139261067 - AluSx SINE Alu -21 291 1 1455 224 69 16 chr10 6328221 6328500 -139260788 - Charlie1 DNA MER1_type -142 2619 2307 646 263 72 0 chr10 6328503 6328697 -139260591 - Charlie1 DNA MER1_type -767 1994 1787 423 284 216 21 chr10 6332386 6332580 -139256708 + MIR SINE MIR 31 262 0 260 295 82 16 chr10 6333379 6333501 -139255787 + L1MB7 LINE L1 6046 6175 -9 366 250 117 51 chr10 6334565 6334761 -139254527 + MLT1A2 LTR MaLR 1 209 -156 1976 131 10 13 chr10 6335046 6335344 -139253944 - AluSx SINE Alu -15 297 1 326 356 108 16 chr10 6335412 6335718 -139253570 + L2 LINE L2 2862 3195 -118 2248 119 0 0 chr10 6337129 6337424 -139251864 - AluSx SINE Alu -17 295 1 262 287 41 49 chr10 6337648 6337770 -139251518 + MIR3 SINE MIR 1 121 -87 * 575 330 58 5 chr10 6337768 6337956 -139251332 + L3 LINE CR1 1379 1576 -1 1929 97 0 34 chr10 6338561 6338829 -139250459 + AluSx SINE Alu 49 307 -5 260 293 104 47 chr10 6338937 6339043 -139250245 + MIR SINE MIR 34 145 -63 2431 215 11 70 chr10 6339082 6339652 -139249636 + L1M4 LINE L1 2319 2835 -3311 2126 151 0 0 chr10 6339652 6339951 -139249337 + AluSx SINE Alu 3 301 -11 2431 215 11 70 chr10 6339951 6340134 -139249154 + L1M4 LINE L1 2835 3027 -3119 180 0 0 0 chr10 6340134 6340154 -139249134 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 2218 109 3 10 chr10 6340159 6340461 -139248827 + AluSx SINE Alu 1 300 -12 2058 126 3 7 chr10 6341863 6342189 -139247099 - AluSx SINE Alu 0 312 1 24 0 0 0 chr10 6342221 6342245 -139247043 + AT_rich Low_complexity Low_complexity 1 24 0 27 49 0 0 chr10 6342553 6342594 -139246694 + AT_rich Low_complexity Low_complexity 1 41 0 31 0 0 0 chr10 6342696 6342727 -139246561 + AT_rich Low_complexity Low_complexity 1 31 0 750 148 0 41 chr10 6342727 6342849 -139246439 - FLAM_C SINE Alu -25 118 2 1632 141 87 7 chr10 6343091 6343368 -139245920 + AluJo SINE Alu 1 299 -13 2351 77 7 0 chr10 6343795 6344092 -139245196 + AluSp SINE Alu 1 299 -14 327 125 0 0 chr10 6344695 6344751 -139244537 + Alu SINE Alu 1 56 -247 1164 138 0 0 chr10 6344771 6344930 -139244358 + AluSg/x SINE Alu 115 273 -39 23 97 0 0 chr10 6345034 6345106 -139244182 + AT_rich Low_complexity Low_complexity 1 72 0 218 337 36 12 chr10 6345277 6345360 -139243928 - L3b LINE CR1 -95 1488 1404 2225 129 13 0 chr10 6345560 6345869 -139243419 + AluSq SINE Alu 1 313 0 2093 98 56 3 chr10 6345966 6346251 -139243037 + AluSq SINE Alu 1 300 -13 2227 142 0 0 chr10 6346299 6346609 -139242679 - AluSx SINE Alu -2 310 1 313 71 0 0 chr10 6347064 6347106 -139242182 + 5S rRNA rRNA 1 42 -79 257 0 30 0 chr10 6348090 6348123 -139241165 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1889 176 22 35 chr10 6348628 6348714 -139240574 + MLT1A1 LTR MaLR 1 87 -278 2183 131 3 0 chr10 6348714 6349012 -139240276 + AluSx SINE Alu 1 299 -13 1889 176 22 35 chr10 6349012 6349295 -139239993 + MLT1A1 LTR MaLR 87 365 0 180 218 195 46 chr10 6350690 6350777 -139238511 - MER5B DNA MER1_type -1 177 78 429 304 22 5 chr10 6351489 6351756 -139237532 + MLT1J1 LTR MaLR 37 336 -110 269 253 43 10 chr10 6351773 6351894 -139237394 + MLT1J1 LTR MaLR 325 441 -5 22 0 0 0 chr10 6352044 6352066 -139237222 + AT_rich Low_complexity Low_complexity 1 22 0 420 265 96 42 chr10 6352829 6353008 -139236280 - MIR3 SINE MIR -51 211 3 194 0 39 0 chr10 6354087 6354113 -139235175 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1930 130 3 18 chr10 6354115 6354400 -139234888 - AluSx SINE Alu -31 281 1 2244 83 3 10 chr10 6355512 6355800 -139233488 + AluSx SINE Alu 1 286 -26 198 296 111 68 chr10 6356300 6356462 -139232826 + MIR SINE MIR 74 242 -20 232 221 14 64 chr10 6356856 6356996 -139232292 + C-rich Low_complexity Low_complexity 2 134 0 32 0 0 0 chr10 6357104 6357136 -139232152 + GC_rich Low_complexity Low_complexity 1 32 0 227 182 26 52 chr10 6358006 6358083 -139231205 + (CCCGG)n Simple_repeat Simple_repeat 1 75 0 25 31 0 0 chr10 6358148 6358180 -139231108 + GC_rich Low_complexity Low_complexity 1 32 0 289 237 166 22 chr10 6358755 6358894 -139230394 - L1MD2 LINE L1 -148 6211 6053 2211 81 0 39 chr10 6359741 6360048 -139229240 + AluSq SINE Alu 4 298 -15 442 261 62 41 chr10 6360173 6360368 -139228920 + MIR SINE MIR 61 259 -3 2221 116 0 0 chr10 6360810 6361103 -139228185 - AluSx SINE Alu -8 304 12 363 302 116 32 chr10 6361696 6361885 -139227403 + L1 LINE L1 5191 5395 -751 471 346 77 58 chr10 6361914 6361947 -139227341 - L2 LINE L2 -5 3267 3236 2460 69 0 7 chr10 6361947 6362252 -139227036 + AluY SINE Alu 7 309 -2 471 346 77 58 chr10 6362252 6362646 -139226642 - L2 LINE L2 -36 3236 2832 2361 111 0 9 chr10 6362658 6362974 -139226314 - AluSq SINE Alu 0 313 1 334 376 16 11 chr10 6362980 6363166 -139226122 - L2 LINE L2 -766 2548 2362 411 307 102 28 chr10 6363511 6363726 -139225562 + MIR SINE MIR 16 246 -16 1861 142 69 0 chr10 6363828 6364103 -139225185 + AluSx SINE Alu 1 294 -18 227 83 0 42 chr10 6364919 6364967 -139224321 + (TTTTTG)n Simple_repeat Simple_repeat 3 48 0 1326 98 0 0 chr10 6364997 6365161 -139224127 - AluSg SINE Alu -146 164 1 39 0 0 37 chr10 6365336 6365352 -139223936 + AT_rich Low_complexity Low_complexity 1 16 -36 2050 96 0 41 chr10 6365352 6365436 -139223852 + AluSc SINE Alu 1 87 -222 2449 71 7 0 chr10 6365436 6365733 -139223555 + AluY SINE Alu 1 299 -12 2050 96 0 41 chr10 6365733 6365941 -139223347 + AluSc SINE Alu 87 281 -28 390 21 0 0 chr10 6365941 6365988 -139223300 + (TA)n Simple_repeat Simple_repeat 2 48 0 39 0 0 37 chr10 6365988 6366024 -139223264 + AT_rich Low_complexity Low_complexity 14 52 0 975 135 0 0 chr10 6366324 6366457 -139222831 + FLAM_C SINE Alu 1 133 0 2976 88 65 18 chr10 6366550 6366994 -139222294 + MER4C LTR ERV1 1 465 0 2115 119 3 49 chr10 6367219 6367546 -139221742 - AluSx SINE Alu 0 312 1 2256 103 20 0 chr10 6367939 6368231 -139221057 - AluSx SINE Alu -14 298 1 1553 115 51 0 chr10 6368611 6368845 -139220443 - AluSg SINE Alu -4 306 61 210 179 21 53 chr10 6369016 6369111 -139220177 + (TTTG)n Simple_repeat Simple_repeat 3 94 0 1782 127 6 47 chr10 6369394 6369716 -139219572 - AluSx SINE Alu -3 309 1 2112 99 20 0 chr10 6370128 6370420 -139218868 - AluSx SINE Alu -14 298 1 2026 109 41 0 chr10 6370801 6371094 -139218194 - AluSg SINE Alu -5 305 1 2058 134 0 0 chr10 6372199 6372505 -139216783 + AluSx SINE Alu 1 306 -6 222 161 36 36 chr10 6372704 6372760 -139216528 + T-rich Low_complexity Low_complexity 3 58 0 2163 85 0 0 chr10 6373428 6373729 -139215559 + AluSx SINE Alu 1 301 0 1265 111 0 0 chr10 6373729 6373901 -139215387 + AluSg/x SINE Alu 129 300 -10 681 280 14 14 chr10 6374031 6374242 -139215046 + L2 LINE L2 2999 3209 -104 24 0 0 0 chr10 6374256 6374280 -139215008 + AT_rich Low_complexity Low_complexity 1 24 0 259 258 15 0 chr10 6374314 6374380 -139214908 - MIR SINE MIR -17 245 179 2073 105 7 0 chr10 6375425 6375711 -139213577 + AluSc SINE Alu 3 290 -19 308 184 53 13 chr10 6376032 6376108 -139213180 - L1ME4a LINE L1 -45 6076 5998 1925 121 3 48 chr10 6376138 6376283 -139213005 + AluSx SINE Alu 1 126 -186 2151 100 0 3 chr10 6376283 6376583 -139212705 + AluY SINE Alu 2 300 -11 1925 121 3 48 chr10 6376583 6376751 -139212537 + AluSx SINE Alu 126 300 -12 2312 73 0 0 chr10 6376756 6377045 -139212243 + AluY SINE Alu 1 289 -22 1992 130 7 0 chr10 6377114 6377415 -139211873 - AluSx SINE Alu -9 303 1 182 235 82 71 chr10 6377552 6377650 -139211638 - L2 LINE L2 -1313 2001 1903 2113 85 3 0 chr10 6378184 6378507 -139210781 - AluSp SINE Alu 0 324 1 1724 129 71 4 chr10 6378927 6379207 -139210081 + AluJo SINE Alu 1 299 -13 212 236 145 21 chr10 6379361 6379531 -139209757 - L2 LINE L2 -1438 1876 1638 755 106 89 0 chr10 6379672 6379795 -139209493 + L1PA16 LINE L1 6024 6157 -9 541 259 73 0 chr10 6379943 6380148 -139209140 - L2 LINE L2 -1794 1520 1301 249 254 56 0 chr10 6380189 6380260 -139209028 - MER5A DNA MER1_type -53 136 62 686 233 14 0 chr10 6380274 6380420 -139208868 - L1MA10 LINE L1 -1 6333 6186 1273 94 124 0 chr10 6380422 6380624 -139208664 + MER30 DNA MER1_type 4 230 0 1338 132 14 7 chr10 6380658 6380864 -139208424 - LTR12 LTR ERV1 -133 581 276 357 204 45 68 chr10 6380864 6380996 -139208292 - LTR30 LTR ERV1 -71 723 552 289 93 0 0 chr10 6380996 6381039 -139208249 - pTR5 LTR ERV1 -433 2005 1963 * 1031 77 8 0 chr10 6381022 6381152 -139208136 - LTR12 LTR ERV1 -531 183 53 250 269 0 0 chr10 6381152 6381204 -139208084 - LTR30 LTR ERV1 -670 52 1 5642 92 8 12 chr10 6381209 6381982 -139207306 - HERV9 LTR ERV1 -4 8395 7626 2063 124 77 95 chr10 6381980 6382902 -139206386 - HERV17 LTR ERV1 -5156 1740 703 * 6308 91 8 11 chr10 6382903 6383771 -139205517 - HERV17 LTR ERV1 -3455 4944 4080 541 82 61 10 chr10 6383778 6383876 -139205412 - HERV17 LTR ERV1 -5260 3139 3037 1724 153 12 41 chr10 6384009 6384080 -139205208 + MER46B DNA MER2_type 30 102 -2629 2299 84 0 13 chr10 6384080 6384389 -139204899 + AluY SINE Alu 1 305 -6 1724 153 12 41 chr10 6384389 6384657 -139204631 + MER46B DNA MER2_type 102 234 -2 1920 120 10 19 chr10 6384839 6385147 -139204141 + AluSx SINE Alu 1 305 -7 349 252 61 46 chr10 6386578 6386709 -139202579 + L2 LINE L2 3181 3313 0 368 191 95 87 chr10 6386985 6386999 -139202289 + L1MC4 LINE L1 1978 1990 -6332 1983 130 3 0 chr10 6386999 6387292 -139201996 + AluSx SINE Alu 1 294 -18 368 191 95 87 chr10 6387292 6387403 -139201885 + L1MC4 LINE L1 1990 6982 -1340 180 176 0 0 chr10 6388892 6388926 -139200362 + GA-rich Low_complexity Low_complexity 2 35 0 218 183 134 12 chr10 6389335 6389417 -139199871 + SUBTEL_sa Satellite Satellite 11 102 -72 285 167 0 0 chr10 6390127 6390181 -139199107 + (CA)n Simple_repeat Simple_repeat 1 54 0 520 253 66 62 chr10 6390394 6390651 -139198637 + L1 LINE L1 2266 2523 -3623 706 302 120 40 chr10 6390732 6391232 -139198056 + L1 LINE L1 2632 3171 -2975 2331 63 0 0 chr10 6392180 6392467 -139196821 - AluSq SINE Alu -9 304 18 947 97 14 0 chr10 6392500 6392644 -139196644 + (TTTC)n Simple_repeat Simple_repeat 1 146 0 2025 114 0 0 chr10 6392644 6392925 -139196363 - AluSq SINE Alu -32 281 1 23 0 0 0 chr10 6393110 6393133 -139196155 + AT_rich Low_complexity Low_complexity 1 23 0 2099 121 7 0 chr10 6393278 6393584 -139195704 + AluSx SINE Alu 1 308 -4 1728 153 0 7 chr10 6393824 6394099 -139195189 - AluJb SINE Alu -26 286 14 430 305 67 22 chr10 6394592 6394815 -139194473 - MIR SINE MIR -28 234 2 324 339 26 0 chr10 6394949 6395064 -139194224 - MIR SINE MIR -12 250 133 467 240 71 19 chr10 6396382 6396536 -139192752 + HERV16 LTR ERVL 153 314 -4682 908 124 7 0 chr10 6396540 6396677 -139192611 + AluSg/x SINE Alu 158 295 -17 499 326 127 17 chr10 6396715 6397034 -139192254 - HERVL LTR ERVL -2096 2900 2617 1916 118 14 0 chr10 6397034 6397342 -139191946 + AluSp SINE Alu 1 312 0 499 326 127 17 chr10 6397342 6397537 -139191751 - HERVL LTR ERVL -2379 2617 2323 1262 265 7 0 chr10 6397554 6397841 -139191447 + MER58B DNA MER1_type 15 303 -38 677 298 121 46 chr10 6397852 6397918 -139191370 - HERVL LTR ERVL -2668 2328 2268 2119 115 3 0 chr10 6397918 6398223 -139191065 - AluSx SINE Alu -6 306 1 677 298 121 46 chr10 6398223 6398502 -139190786 - HERVL LTR ERVL -2728 2268 1957 207 0 0 0 chr10 6398593 6398616 -139190672 + (TTA)n Simple_repeat Simple_repeat 2 24 0 2097 111 0 0 chr10 6398618 6398898 -139190390 - AluSx SINE Alu -32 280 1 358 164 41 82 chr10 6399379 6399525 -139189763 + (GAGTG)n Simple_repeat Simple_repeat 4 143 0 225 0 0 0 chr10 6399709 6399734 -139189554 + (A)n Simple_repeat Simple_repeat 1 25 0 276 198 23 93 chr10 6399738 6399824 -139189464 - L1ME3A LINE L1 -123 6047 5968 1578 252 67 40 chr10 6399892 6400654 -139188634 - L1ME3A LINE L1 -214 5956 5172 1524 105 5 5 chr10 6400651 6400870 -139188418 + L1PA14 LINE L1 5820 6038 -123 * 1055 96 0 0 chr10 6400873 6401009 -139188279 + AluSq/x SINE Alu 1 136 -176 2116 124 0 6 chr10 6401009 6401323 -139187965 + AluSx SINE Alu 1 312 0 796 123 22 0 chr10 6401325 6401463 -139187825 + L1PA14 LINE L1 6020 6160 -1 2350 62 7 3 chr10 6401469 6401776 -139187512 + AluY SINE Alu 1 308 -3 367 304 0 0 chr10 6401788 6401900 -139187388 - L1ME3A LINE L1 -988 5158 5047 795 253 136 8 chr10 6401902 6402247 -139187041 - LTR50 LTR ERVL 0 795 326 3774 92 0 25 chr10 6402260 6402784 -139186504 - MER9 LTR ERVK 0 511 1 576 251 111 6 chr10 6402809 6402980 -139186308 - LTR50 LTR ERVL -598 197 9 1854 162 3 0 chr10 6402986 6403282 -139186006 - AluSx SINE Alu -15 297 1 1115 277 112 15 chr10 6403285 6403892 -139185396 - L1ME3A LINE L1 -1097 5049 4384 * 3781 249 66 60 chr10 6403879 6404365 -139184923 - L1MC4 LINE L1 0 8042 7561 2344 85 0 0 chr10 6404365 6404672 -139184616 - AluSx SINE Alu 0 312 6 3781 249 66 60 chr10 6404672 6405185 -139184103 - L1MC4 LINE L1 -481 7561 7053 1652 153 10 35 chr10 6405185 6405499 -139183789 - AluJo SINE Alu 0 312 7 3781 249 66 60 chr10 6405499 6406001 -139183287 - L1MC4 LINE L1 -989 7053 6527 564 257 39 45 chr10 6406001 6406180 -139183108 - MER45A DNA AcHobo 0 178 1 3781 249 66 60 chr10 6406180 6406216 -139183072 - L1MC4 LINE L1 -1515 6527 6493 2789 209 80 15 chr10 6406266 6406920 -139182368 - MER45B DNA AcHobo -68 972 277 488 213 37 81 chr10 6406931 6406969 -139182319 - MER45B DNA AcHobo -895 145 107 2501 59 0 0 chr10 6406969 6407274 -139182014 + AluSx SINE Alu 1 305 -7 488 213 37 81 chr10 6407274 6407371 -139181917 - MER45B DNA AcHobo -933 107 16 34 0 0 22 chr10 6407647 6407666 -139181622 + AT_rich Low_complexity Low_complexity 1 19 -25 1759 123 90 0 chr10 6407666 6407943 -139181345 + AluSg SINE Alu 1 302 -8 34 0 0 22 chr10 6407943 6407968 -139181320 + AT_rich Low_complexity Low_complexity 19 44 0 1897 154 0 7 chr10 6408036 6408342 -139180946 + AluJb SINE Alu 1 304 -8 301 213 0 16 chr10 6408350 6408411 -139180877 - L1ME3A LINE L1 -1771 4375 4316 624 188 107 0 chr10 6408641 6408753 -139180535 - FLAM_A SINE Alu -8 125 2 2133 92 0 7 chr10 6409146 6409474 -139179814 + AluSq SINE Alu 2 327 0 444 309 116 77 chr10 6409647 6410237 -139179051 + L2 LINE L2 2670 3271 -1 222 319 14 14 chr10 6410855 6410927 -139178361 + MIR SINE MIR 36 107 -155 303 404 7 7 chr10 6411246 6411382 -139177906 - L2 LINE L2 -4 3268 3133 2267 80 3 7 chr10 6411708 6412010 -139177278 + AluSx SINE Alu 1 301 -11 1387 114 0 10 chr10 6412299 6412501 -139176787 - AluSg/x SINE Alu -8 304 105 1686 194 14 81 chr10 6412865 6413221 -139176067 + MLT1B LTR MaLR 1 326 -64 1632 171 24 0 chr10 6413221 6413519 -139175769 + AluJo SINE Alu 1 305 -7 1686 194 14 81 chr10 6413519 6413580 -139175708 + MLT1B LTR MaLR 326 390 0 1310 224 88 42 chr10 6413582 6413861 -139175427 - Charlie4a DNA MER1_type -1458 503 193 1676 160 38 0 chr10 6413861 6414154 -139175134 + AluJb SINE Alu 1 304 -8 1310 224 88 42 chr10 6414154 6414330 -139174958 - Charlie4a DNA MER1_type -1768 193 27 1304 95 53 0 chr10 6414922 6415111 -139174177 - AluSg/x SINE Alu -15 297 99 2098 208 69 53 chr10 6415960 6416135 -139173153 - L1MD2 LINE L1 -24 6335 6164 261 0 0 0 chr10 6416135 6416164 -139173124 + (TG)n Simple_repeat Simple_repeat 2 30 0 2098 208 69 53 chr10 6416164 6416391 -139172897 - L1MD2 LINE L1 -195 6164 5942 2563 111 24 77 chr10 6416391 6416518 -139172770 + MSTA LTR MaLR 1 133 -295 2149 94 43 0 chr10 6416518 6416817 -139172471 - AluSx SINE Alu 0 312 1 2563 111 24 77 chr10 6416817 6417141 -139172147 + MSTA LTR MaLR 133 428 0 2098 208 69 53 chr10 6417141 6417218 -139172070 - L1MD2 LINE L1 -417 5942 5868 2084 105 0 3 chr10 6417218 6417512 -139171776 - AluSc SINE Alu -16 293 1 2098 208 69 53 chr10 6417512 6417569 -139171719 - L1MD2 LINE L1 -491 5868 5813 2031 113 20 3 chr10 6417569 6417871 -139171417 - AluSg SINE Alu -3 307 1 2098 208 69 53 chr10 6417871 6417956 -139171332 - L1MD2 LINE L1 -546 5813 5701 322 226 137 20 chr10 6418002 6418104 -139171184 + L2 LINE L2 3159 3272 0 441 350 96 8 chr10 6418129 6418369 -139170919 + MIR SINE MIR 1 261 -1 383 253 174 47 chr10 6419760 6420013 -139169275 + MLT1J2 LTR MaLR 20 304 -146 3071 87 4 24 chr10 6420102 6420553 -139168735 - L1PB1 LINE L1 0 6151 5710 432 254 61 9 chr10 6420683 6420797 -139168491 - MLT1J LTR MaLR -368 143 24 1223 137 0 0 chr10 6421255 6421430 -139167858 - FAM SINE Alu 0 175 1 2280 98 0 7 chr10 6422268 6422564 -139166724 - AluSq SINE Alu -19 294 1 621 132 0 0 chr10 6422769 6422860 -139166428 - MLT2A2 LTR ERVL -147 306 216 2534 150 17 2 chr10 6422932 6423338 -139165950 + LTR45B LTR ERV1 3 414 -75 2014 222 12 20 chr10 6423370 6423860 -139165428 - L1MCa LINE L1 -3388 3176 2691 3398 169 30 14 chr10 6423865 6424521 -139164767 - L1MB4 LINE L1 0 6180 5514 2273 124 3 0 chr10 6424522 6424829 -139164459 - AluSq SINE Alu -5 308 1 2508 145 15 0 chr10 6424849 6425255 -139164033 - L1MB1 LINE L1 -5 6163 5752 2458 79 0 0 chr10 6425269 6425573 -139163715 - AluY SINE Alu -7 304 1 1527 180 29 26 chr10 6425573 6425663 -139163625 - L1MCa LINE L1 -3948 2616 2528 2090 154 0 0 chr10 6425663 6425974 -139163314 - AluSx SINE Alu -1 311 1 1527 180 29 26 chr10 6425974 6426301 -139162987 - L1MCa LINE L1 -4036 2528 2273 2023 151 3 66 chr10 6426304 6426382 -139162906 + MER7A DNA MER2_type 7 88 -2950 225 0 0 0 chr10 6426382 6426407 -139162881 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 1876 151 0 11 chr10 6426407 6426686 -139162602 - AluSx SINE Alu -36 276 1 2023 151 3 66 chr10 6426686 6426971 -139162317 + MER7A DNA MER2_type 86 346 0 1809 158 61 24 chr10 6426971 6427499 -139161789 - L1MCa LINE L1 -4290 2274 1767 13080 26 1 0 chr10 6427499 6429774 -139159514 - L1PA3 LINE L1 0 6155 3880 2296 117 0 16 chr10 6429783 6430100 -139159188 - AluSx SINE Alu 0 312 1 1809 158 61 24 chr10 6430100 6430297 -139158991 - L1MCa LINE L1 -4804 1760 1378 1904 141 48 14 chr10 6430580 6430871 -139158417 + AluSx SINE Alu 1 301 -11 2324 120 0 0 chr10 6431242 6431550 -139157738 - AluSx SINE Alu -4 308 1 2588 63 0 16 chr10 6431569 6431885 -139157403 - AluY SINE Alu 0 311 1 2055 135 0 0 chr10 6432639 6432942 -139156346 - AluSx SINE Alu 0 303 1 2868 78 14 0 chr10 6433561 6433920 -139155368 - THE1B LTR MaLR 0 364 1 3788 208 97 39 chr10 6434051 6434512 -139154776 - L1MCa LINE L1 -4850 1195 762 2204 93 0 14 chr10 6434512 6434822 -139154466 - AluSq SINE Alu 0 306 1 3788 208 97 39 chr10 6434822 6435483 -139153805 - L1MCa LINE L1 -5283 762 7 236 30 30 0 chr10 6435495 6435528 -139153760 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 4479 104 22 2 chr10 6435655 6436277 -139153011 - MER41B LTR ERV1 0 635 1 1678 174 41 0 chr10 6437669 6437962 -139151326 - AluJo SINE Alu -7 305 1 280 325 8 8 chr10 6438994 6439120 -139150168 + L2 LINE L2 2947 3072 -200 252 0 0 0 chr10 6439265 6439293 -139149995 + (T)n Simple_repeat Simple_repeat 1 28 0 303 322 51 17 chr10 6439552 6439670 -139149618 + L2 LINE L2 3138 3259 -13 2271 123 0 19 chr10 6441341 6441657 -139147631 - AluSx SINE Alu -2 310 1 2535 77 7 0 chr10 6441666 6441976 -139147312 - AluSx SINE Alu 0 312 1 342 67 0 0 chr10 6442033 6442046 -139147242 + (CA)n Simple_repeat Simple_repeat 1 58 0 342 67 0 0 chr10 6442046 6442091 -139147197 + (CA)n Simple_repeat Simple_repeat 2 46 0 193 304 81 47 chr10 6442175 6442323 -139146965 - MIR3 SINE MIR -15 193 41 2180 92 44 0 chr10 6442830 6443125 -139146163 + AluSg SINE Alu 2 309 -1 417 265 158 15 chr10 6443154 6443350 -139145938 + MLT1J2 LTR MaLR 111 334 -116 1074 112 0 7 chr10 6443805 6443948 -139145340 - AluSq/x SINE Alu -162 151 10 1057 178 108 91 chr10 6443982 6444268 -139145020 - AluJo SINE Alu -11 301 11 21 0 0 0 chr10 6444277 6444298 -139144990 + AT_rich Low_complexity Low_complexity 1 21 0 802 125 0 76 chr10 6444304 6444448 -139144840 - FLAM_C SINE Alu 0 143 11 1203 169 105 92 chr10 6444482 6444777 -139144511 - AluJo SINE Alu -13 299 1 565 299 35 53 chr10 6444962 6445280 -139144008 - L1MEd LINE L1 -5397 722 411 901 209 0 0 chr10 6445322 6445494 -139143794 - FAM SINE Alu -3 172 1 1345 225 55 55 chr10 6446170 6446592 -139142696 + MLT2C2 LTR ERVL 1 422 -42 338 105 0 18 chr10 6446604 6446661 -139142627 + (CA)n Simple_repeat Simple_repeat 2 57 0 277 57 0 0 chr10 6446661 6446696 -139142592 + MLT2D LTR ERVL 367 401 -13 618 120 17 8 chr10 6446796 6446913 -139142375 + CT-rich Low_complexity Low_complexity 2 119 0 1936 178 62 11 chr10 6447064 6447435 -139141853 + MSTD LTR MaLR 7 396 0 2184 122 0 10 chr10 6447527 6447831 -139141457 + AluSx SINE Alu 1 301 -11 652 218 40 111 chr10 6448198 6448578 -139140710 + L1MC5 LINE L1 7340 7692 -269 370 132 0 0 chr10 6448579 6448632 -139140656 + Alu SINE Alu 2 54 -248 1735 133 0 49 chr10 6448633 6448918 -139140370 + AluSx SINE Alu 12 282 -30 509 268 82 10 chr10 6448952 6449146 -139140142 + L1MC5 LINE L1 7678 7885 -76 2184 114 16 0 chr10 6450768 6451074 -139138214 + AluSx SINE Alu 1 311 -1 3080 248 78 29 chr10 6451729 6452726 -139136562 + MER97b DNA MER1_type? 1 1046 -7 291 362 60 0 chr10 6452937 6453086 -139136202 + L2 LINE L2 3114 3271 -1 866 277 74 38 chr10 6453580 6454053 -139135235 - L1ME4a LINE L1 -25 6096 5607 819 70 53 0 chr10 6454575 6454689 -139134599 - MER41A LTR ERV1 0 554 435 248 218 39 26 chr10 6454693 6454771 -139134517 - L1MC5 LINE L1 -519 7442 7364 2105 131 13 7 chr10 6454776 6455082 -139134206 - AluSx SINE Alu -4 308 1 330 305 135 10 chr10 6455448 6455648 -139133640 + LTR16A LTR ERVL 1 225 -225 1927 134 62 0 chr10 6455767 6456059 -139133229 - AluSx SINE Alu -2 310 1 199 206 0 0 chr10 6458374 6458408 -139130880 - L2 LINE L2 -49 3264 3231 3182 149 28 0 chr10 6458408 6458917 -139130371 + L1PB4 LINE L1 5593 6115 -41 35 63 0 0 chr10 6458930 6458993 -139130295 + AT_rich Low_complexity Low_complexity 1 63 0 2129 125 3 10 chr10 6459213 6459516 -139129772 + AluJb SINE Alu 1 301 -11 1353 193 120 7 chr10 6459746 6460021 -139129267 - AluJb SINE Alu -6 306 1 265 231 39 0 chr10 6460251 6460303 -139128985 - MLT1K LTR MaLR -357 231 178 286 322 80 75 chr10 6460478 6460931 -139128357 + L2 LINE L2 449 903 -2411 190 324 66 81 chr10 6460934 6461070 -139128218 + L2 LINE L2 1089 1222 -2092 936 311 97 40 chr10 6461152 6462331 -139126957 + L2 LINE L2 2056 3308 -5 1307 201 21 49 chr10 6462417 6462705 -139126583 - MLT2B1 LTR ERVL -8 512 233 1390 198 52 7 chr10 6463004 6463292 -139125996 + L1M3 LINE L1 5443 5743 -437 2605 145 9 53 chr10 6463292 6463727 -139125561 + L1MB3 LINE L1 5679 6089 -94 2076 124 0 10 chr10 6463727 6464026 -139125262 - AluSx SINE Alu -16 296 1 2605 145 9 53 chr10 6464026 6464115 -139125173 + L1MB3 LINE L1 6089 6180 -3 1778 170 3 14 chr10 6464266 6464560 -139124728 - AluSx SINE Alu -21 291 1 371 289 108 49 chr10 6465135 6465404 -139123884 + MER109 Unknown Unknown 70 322 -2110 2311 96 11 20 chr10 6465404 6465759 -139123529 + L1PA10 LINE L1 5817 6168 0 371 289 108 49 chr10 6465759 6465847 -139123441 + MER109 Unknown Unknown 322 779 -1653 235 286 12 36 chr10 6465931 6466015 -139123273 + MER109 Unknown Unknown 536 617 -1815 225 200 0 20 chr10 6465996 6466046 -139123242 - MER109 Unknown Unknown -1778 654 606 * 2604 217 65 74 chr10 6466199 6467081 -139122207 + MER109 Unknown Unknown 535 1408 -1024 209 276 0 0 chr10 6468306 6468364 -139120924 + T-rich Low_complexity Low_complexity 2 59 0 697 144 17 8 chr10 6468969 6469087 -139120201 - FLAM_C SINE Alu -18 125 7 1387 140 4 13 chr10 6469216 6469445 -139119843 - AluJb SINE Alu 0 312 86 2295 58 0 42 chr10 6469749 6470058 -139119230 - AluY SINE Alu -15 296 1 387 244 151 8 chr10 6470076 6470195 -139119093 + MER5B DNA MER1_type 1 136 -42 259 152 0 22 chr10 6470300 6470346 -139118942 + MER20 DNA MER1_type 100 144 -75 495 167 0 0 chr10 6470346 6470436 -139118852 + GA-rich Low_complexity Low_complexity 1 90 0 262 146 83 0 chr10 6470436 6470484 -139118804 - AluJ/FRAM SINE Alu -20 282 231 1405 195 54 41 chr10 6470600 6470969 -139118319 + MLT1A2 LTR MaLR 1 374 0 2085 124 0 7 chr10 6471170 6471482 -139117806 + AluSx SINE Alu 1 312 0 1334 146 24 0 chr10 6471708 6471920 -139117368 + MER20 DNA MER1_type 1 217 -2 186 368 105 0 chr10 6471950 6472064 -139117224 - MIR SINE MIR -77 185 60 257 206 0 44 chr10 6472758 6472809 -139116479 - MLT2B1 LTR ERVL 0 520 471 2325 120 52 14 chr10 6472809 6473158 -139116130 - THE1B LTR MaLR 0 364 3 257 206 0 44 chr10 6473158 6473174 -139116114 - MLT2B1 LTR ERVL -49 471 456 1350 201 99 43 chr10 6473227 6473623 -139115665 - MLT2B1 LTR ERVL -37 377 4 936 177 6 6 chr10 6473765 6473929 -139115359 + MER3 DNA MER1_type 41 204 -5 480 231 0 0 chr10 6474162 6474266 -139115022 - L2 LINE L2 0 3272 3169 189 286 91 0 chr10 6474360 6474437 -139114851 - L2 LINE L2 -42 3271 3188 312 291 64 71 chr10 6474492 6474528 -139114760 - MIR SINE MIR -75 187 152 2185 110 7 7 chr10 6474528 6474827 -139114461 - AluSg SINE Alu -11 299 1 312 291 64 71 chr10 6474827 6474931 -139114357 - MIR SINE MIR -110 152 48 237 98 0 0 chr10 6475627 6475668 -139113620 + (TTTC)n Simple_repeat Simple_repeat 1 41 0 1578 163 64 34 chr10 6475672 6475695 -139113593 - AluJb SINE Alu -8 304 283 437 0 0 19 chr10 6475695 6475749 -139113539 + (TCTCC)n Simple_repeat Simple_repeat 2 54 0 1578 163 64 34 chr10 6475749 6476020 -139113268 - AluJb SINE Alu -29 283 1 1232 185 121 14 chr10 6476020 6476301 -139112987 - AluJo SINE Alu -1 311 1 22 35 0 0 chr10 6476499 6476528 -139112760 + AT_rich Low_complexity Low_complexity 1 29 0 431 280 159 5 chr10 6476698 6476887 -139112401 + MLT1I LTR MaLR 186 403 -6 180 191 132 29 chr10 6476957 6477025 -139112263 + L3b LINE CR1 1263 1337 -246 327 338 23 15 chr10 6477077 6477210 -139112078 + MIR SINE MIR 21 154 -108 306 197 26 0 chr10 6477321 6477438 -139111850 + (TA)n Simple_repeat Simple_repeat 2 121 0 239 231 0 10 chr10 6477485 6477589 -139111699 + (TA)n Simple_repeat Simple_repeat 1 103 0 305 309 79 10 chr10 6478529 6478811 -139110477 - L2 LINE L2 -266 3047 2696 3212 152 9 12 chr10 6478821 6479379 -139109909 + L1MB3 LINE L1 5587 6142 -41 1950 130 3 63 chr10 6479379 6479694 -139109594 + AluSx SINE Alu 1 296 -16 227 189 0 0 chr10 6479694 6479747 -139109541 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 305 96 19 0 chr10 6479747 6479799 -139109489 + L1MB3 LINE L1 6131 6183 0 446 173 6 0 chr10 6480503 6480583 -139108705 + L1MA7 LINE L1 5857 5940 -240 1447 96 10 38 chr10 6480584 6480793 -139108495 - AluSg/x SINE Alu -11 301 99 1540 183 39 39 chr10 6480794 6481149 -139108139 + L1MA7 LINE L1 5935 6289 -2 2187 111 17 0 chr10 6481830 6482128 -139107160 + AluSx SINE Alu 3 305 -7 341 356 8 0 chr10 6482722 6482840 -139106448 + (TG)n Simple_repeat Simple_repeat 2 120 0 660 240 121 96 chr10 6483789 6484268 -139105020 + MLT1J LTR MaLR 1 491 -20 1256 103 0 11 chr10 6484776 6485069 -139104219 + (TCCA)n Simple_repeat Simple_repeat 1 469 0 407 266 87 39 chr10 6485102 6485309 -139103979 - MIR SINE MIR -44 218 2 1700 178 16 7 chr10 6486346 6486655 -139102633 - AluJo SINE Alu 0 312 1 254 237 101 35 chr10 6488410 6488579 -139100709 + Charlie7 DNA MER1_type 2390 2569 -43 2284 91 0 0 chr10 6488599 6488886 -139100402 - AluSx SINE Alu -12 300 14 180 97 0 0 chr10 6488905 6488936 -139100352 + (A)n Simple_repeat Simple_repeat 1 31 0 1477 204 36 68 chr10 6490142 6490616 -139098672 + L1MC5 LINE L1 6726 7183 -787 348 266 65 72 chr10 6490810 6491088 -139098200 - L2 LINE L2 -190 3082 2807 312 227 0 0 chr10 6491447 6491522 -139097766 + MER53 DNA DNA 1 75 -114 341 237 68 59 chr10 6491683 6491696 -139097592 - L2 LINE L2 -13 3300 3289 495 0 0 0 chr10 6491696 6491751 -139097537 + (TCCA)n Simple_repeat Simple_repeat 2 56 0 341 237 68 59 chr10 6491751 6491855 -139097433 - L2 LINE L2 -24 3289 3182 592 228 153 36 chr10 6491908 6492242 -139097046 + L1ME4a LINE L1 5745 6117 -4 200 333 0 0 chr10 6492324 6492387 -139096901 + MIR SINE MIR 68 130 -78 267 31 0 0 chr10 6492593 6492625 -139096663 + (TG)n Simple_repeat Simple_repeat 2 33 0 210 250 120 28 chr10 6494518 6494626 -139094662 + MIR SINE MIR 83 200 -62 437 234 80 106 chr10 6495666 6496016 -139093272 - L1MEd LINE L1 -4869 1250 910 2889 144 214 113 chr10 6496033 6496207 -139093081 - L1 LINE L1 -1833 5273 5118 7581 26 0 4 chr10 6496207 6497224 -139092064 - L1PA3 LINE L1 0 6155 5132 2889 144 214 113 chr10 6497224 6498078 -139091210 - L1 LINE L1 -1988 5118 4141 3890 210 70 51 chr10 6498079 6498745 -139090543 - L1 LINE L1 -3024 4082 3431 471 78 0 0 chr10 6498745 6498809 -139090479 + (TA)n Simple_repeat Simple_repeat 1 64 0 3890 210 70 51 chr10 6498809 6501257 -139088031 - L1 LINE L1 -3675 3431 7 182 373 25 8 chr10 6502999 6503117 -139086171 + L2 LINE L2 2907 3026 -246 557 120 9 56 chr10 6503516 6503578 -139085710 + L1MB3 LINE L1 6081 6137 -46 1540 223 13 21 chr10 6503578 6503955 -139085333 - MLT1A2 LTR MaLR 0 374 1 557 120 9 56 chr10 6503955 6504000 -139085288 + L1MB3 LINE L1 6137 6183 0 246 216 0 0 chr10 6504027 6504078 -139085210 + L1MC4 LINE L1 6652 6702 -1340 231 114 0 0 chr10 6504085 6504120 -139085168 + (TA)n Simple_repeat Simple_repeat 1 35 0 844 213 100 108 chr10 6504909 6505416 -139083872 - MER34C LTR ERV1 -1 584 80 3057 120 5 0 chr10 6505416 6505848 -139083440 + MER57B LTR ERV1 1 434 0 844 213 100 108 chr10 6505848 6505889 -139083399 - MER34C LTR ERV1 -505 80 40 2474 134 31 24 chr10 6506235 6506660 -139082628 - MSTA LTR MaLR 0 428 1 186 376 77 0 chr10 6507140 6507257 -139082031 - MIR3 SINE MIR -29 179 54 3305 157 35 2 chr10 6507662 6508198 -139081090 + MER41C LTR ERV1 1 554 0 224 302 0 0 chr10 6508335 6508388 -139080900 - MIR SINE MIR -135 73 21 44098 29 21 1 chr10 6508931 6514963 -139074325 - L1HS LINE L1 0 6155 1 901 267 185 18 chr10 6515022 6515494 -139073794 - MLT1G1 LTR MaLR 0 595 1 450 219 203 0 chr10 6515550 6515673 -139073615 - MER5A DNA MER1_type -1 188 41 379 191 0 0 chr10 6515963 6516031 -139073257 + MER57B LTR ERV1 38 105 -329 198 356 45 15 chr10 6516152 6516284 -139073004 - L2 LINE L2 -9 3304 3169 1633 171 29 0 chr10 6516393 6516696 -139072592 - AluJo SINE Alu 0 311 1 1779 193 34 3 chr10 6516701 6517089 -139072199 - L1MA4 LINE L1 0 6300 5901 1773 164 52 27 chr10 6517492 6517857 -139071431 - THE1C LTR MaLR -1 374 1 37 0 0 0 chr10 6517939 6517976 -139071312 + AT_rich Low_complexity Low_complexity 1 37 0 745 222 0 0 chr10 6518252 6518387 -139070901 + MER63A DNA MER1_type 51 185 -25 577 207 117 0 chr10 6518391 6518502 -139070786 + AluJb SINE Alu 137 260 -52 234 330 37 28 chr10 6518584 6518693 -139070595 + L2 LINE L2 3151 3260 -12 2241 110 78 26 chr10 6518734 6519080 -139070208 - THE1B LTR MaLR 0 364 1 11980 86 14 3 chr10 6519080 6520642 -139068646 - THE1B-int LTR MaLR 0 1580 1 2267 97 69 26 chr10 6520642 6520991 -139068297 - THE1B LTR MaLR 0 364 1 1608 175 33 0 chr10 6522929 6523230 -139066058 + AluJo SINE Alu 1 310 0 216 0 0 0 chr10 6523573 6523597 -139065691 + (T)n Simple_repeat Simple_repeat 1 24 0 201 196 0 0 chr10 6526145 6526191 -139063097 + (CA)n Simple_repeat Simple_repeat 1 46 0 576 223 0 0 chr10 6526202 6526377 -139062911 + (CA)n Simple_repeat Simple_repeat 2 176 0 264 176 0 0 chr10 6526407 6526458 -139062830 - MER4-int LTR ERV1 -5436 1162 1112 546 199 0 32 chr10 6526476 6526662 -139062626 + (CA)n Simple_repeat Simple_repeat 1 180 0 2289 110 13 0 chr10 6526770 6527078 -139062210 + AluSx SINE Alu 1 312 0 395 293 93 37 chr10 6527204 6527557 -139061731 - HAL1 LINE L1 -4 2503 2095 1454 251 73 19 chr10 6527557 6528024 -139061264 - MLT1F1 LTR MaLR 0 567 76 2192 215 78 23 chr10 6528035 6528597 -139060691 - MLT1E LTR MaLR 0 593 1 330 234 138 0 chr10 6528610 6528704 -139060584 - L1MC4a LINE L1 0 7808 7731 * 4016 270 113 34 chr10 6528702 6529928 -139059360 - HAL1 LINE L1 -419 2088 652 5065 104 9 11 chr10 6529928 6530621 -139058667 + LTR8 LTR ERV1 1 691 0 4016 270 113 34 chr10 6530621 6531328 -139057960 - HAL1 LINE L1 -1855 652 2 3970 118 37 5 chr10 6531650 6532243 -139057045 - LTR9 LTR ERV1 0 612 1 879 223 72 5 chr10 6532511 6532704 -139056584 - MER58A DNA MER1_type -18 206 1 2198 94 0 16 chr10 6532863 6533170 -139056118 - AluSg SINE Alu -8 302 1 1363 129 0 53 chr10 6534231 6534352 -139054936 - LTR8 LTR ERV1 0 691 584 2567 49 0 7 chr10 6534352 6534659 -139054629 - AluY SINE Alu -6 305 1 1363 129 0 53 chr10 6534659 6534746 -139054542 - LTR8 LTR ERV1 -107 584 494 2623 87 45 6 chr10 6534754 6535111 -139054177 - LTR8 LTR ERV1 -320 371 1 4241 193 19 30 chr10 6535548 6536406 -139052882 - L1MB7 LINE L1 0 6184 5318 1947 124 32 0 chr10 6536406 6536689 -139052599 - AluSx SINE Alu -20 292 1 4241 193 19 30 chr10 6536689 6536938 -139052350 - L1MB7 LINE L1 -866 5318 5068 2221 118 3 3 chr10 6536938 6537242 -139052046 + AluSq SINE Alu 1 304 -9 4241 193 19 30 chr10 6537242 6537634 -139051654 - L1MB7 LINE L1 -1116 5068 4698 235 355 74 8 chr10 6537888 6538009 -139051279 - L2 LINE L2 -1 3271 3143 1790 140 20 43 chr10 6538038 6538338 -139050950 - AluJb SINE Alu -1 311 19 225 175 0 0 chr10 6538510 6538550 -139050738 + L2 LINE L2 3258 3297 -16 225 291 64 0 chr10 6539367 6539477 -139049811 + MIR SINE MIR 16 132 -130 291 309 50 55 chr10 6539496 6539697 -139049591 + L2 LINE L2 3107 3306 -7 233 333 11 0 chr10 6539684 6539777 -139049511 + MIR SINE MIR 130 223 -39 * 316 233 14 0 chr10 6539853 6539926 -139049362 - MER94 DNA DNA -13 121 48 620 212 8 15 chr10 6540039 6540171 -139049117 + FLAM_A SINE Alu 12 142 0 2028 169 92 43 chr10 6540253 6540698 -139048590 + LTR24 LTR ERV1 1 467 0 2200 66 38 0 chr10 6541354 6541641 -139047647 + L1PA7 LINE L1 5853 6150 -4 198 0 0 0 chr10 6541667 6541689 -139047599 + (A)n Simple_repeat Simple_repeat 1 22 0 1776 143 89 4 chr10 6541949 6542229 -139047059 + AluSg SINE Alu 1 304 -6 223 179 0 71 chr10 6543073 6543129 -139046159 + L2 LINE L2 3262 3313 0 464 86 14 0 chr10 6543513 6543583 -139045705 + (GA)n Simple_repeat Simple_repeat 2 72 0 753 125 24 18 chr10 6543663 6543831 -139045457 + CT-rich Low_complexity Low_complexity 3 171 0 909 148 0 16 chr10 6543834 6544017 -139045271 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 802 202 11 7 chr10 6544008 6544270 -139045018 + CT-rich Low_complexity Low_complexity 1 262 0 * 1885 167 13 3 chr10 6544278 6544578 -139044710 - AluSx SINE Alu -9 303 1 386 151 48 8 chr10 6546766 6546892 -139042396 + (TG)n Simple_repeat Simple_repeat 1 131 0 265 240 48 19 chr10 6546909 6547013 -139042275 + (TG)n Simple_repeat Simple_repeat 2 108 0 1603 204 54 104 chr10 6547022 6547655 -139041633 - L1MC5 LINE L1 -72 7889 7289 2188 109 10 0 chr10 6547656 6547950 -139041338 - AluSq SINE Alu -16 297 1 498 290 105 29 chr10 6548067 6548381 -139040907 - L1ME LINE L1 -397 5773 5436 2285 122 0 0 chr10 6548586 6548890 -139040398 - AluSx SINE Alu -8 304 1 298 250 43 122 chr10 6549847 6549996 -139039292 + MER20B DNA MER1_type 43 176 -43 2271 101 20 0 chr10 6549996 6550293 -139038995 + AluSx SINE Alu 1 303 -9 298 250 43 122 chr10 6550293 6550331 -139038957 + MER20B DNA MER1_type 176 215 -4 559 288 7 0 chr10 6550485 6550638 -139038650 + MIR SINE MIR 109 262 0 787 181 100 0 chr10 6550882 6551042 -139038246 + MER58A DNA MER1_type 46 221 -3 659 218 84 14 chr10 6551362 6551504 -139037784 - FRAM SINE Alu -13 153 2 420 311 73 39 chr10 6551625 6552033 -139037255 + L1M4 LINE L1 4562 4983 -1163 2487 75 0 0 chr10 6552240 6552547 -139036741 - AluY SINE Alu -4 307 1 297 0 0 0 chr10 6552770 6552803 -139036485 + (CA)n Simple_repeat Simple_repeat 1 33 0 189 0 0 0 chr10 6552833 6552854 -139036434 + (CA)n Simple_repeat Simple_repeat 1 21 0 940 269 78 14 chr10 6553180 6553526 -139035762 + L1MEc LINE L1 39 406 -5990 1686 260 38 66 chr10 6553529 6554267 -139035021 + L1MEc LINE L1 613 1325 -5071 2109 134 0 0 chr10 6554267 6554558 -139034730 - AluSx SINE Alu -21 291 1 1686 260 38 66 chr10 6554558 6554687 -139034601 + L1MEc LINE L1 1325 1456 -4940 474 18 0 0 chr10 6554697 6554752 -139034536 + (TA)n Simple_repeat Simple_repeat 1 55 0 2182 113 0 10 chr10 6555042 6555342 -139033946 - AluSx SINE Alu -15 297 1 5219 90 3 4 chr10 6555513 6556223 -139033065 - L1PB2 LINE L1 -1 6150 5442 776 147 41 14 chr10 6558066 6558506 -139030782 + (TCTA)n Simple_repeat Simple_repeat 1 452 0 205 310 17 0 chr10 6558533 6558591 -139030697 + (TG)n Simple_repeat Simple_repeat 2 60 0 2068 239 95 86 chr10 6558618 6558981 -139030307 - HAL1 LINE L1 -131 2376 2018 2173 135 0 0 chr10 6558981 6559284 -139030004 - AluSx SINE Alu -9 303 1 2024 81 0 4 chr10 6559293 6559540 -139029748 - AluSg SINE Alu -22 288 43 2068 239 95 86 chr10 6559540 6560411 -139028877 - HAL1 LINE L1 -496 2011 1121 1782 181 3 0 chr10 6560500 6560792 -139028496 + AluJo SINE Alu 3 295 -17 635 211 24 0 chr10 6560792 6560915 -139028373 - MER3 DNA MER1_type -80 129 4 273 352 24 8 chr10 6561465 6561590 -139027698 - MIR SINE MIR 0 262 136 380 268 31 24 chr10 6561617 6561744 -139027544 - MIR SINE MIR -62 146 19 465 333 75 9 chr10 6561750 6561963 -139027325 + MIR SINE MIR 11 237 -25 2420 78 7 3 chr10 6564521 6564817 -139024471 - AluSg SINE Alu -13 297 1 734 144 0 24 chr10 6564988 6565113 -139024175 + FLAM_C SINE Alu 21 142 -1 260 296 167 0 chr10 6565539 6565647 -139023641 - MIR3 SINE MIR -30 178 53 25 31 0 0 chr10 6565988 6566020 -139023268 + AT_rich Low_complexity Low_complexity 1 32 0 1619 78 0 0 chr10 6566138 6566331 -139022957 - AluSq SINE Alu -120 193 1 202 274 0 16 chr10 6568025 6568087 -139021201 + GA-rich Low_complexity Low_complexity 4 64 0 1071 174 76 27 chr10 6569014 6569238 -139020050 - AluJb SINE Alu 0 312 78 1642 113 0 0 chr10 6569238 6569450 -139019838 - AluSq SINE Alu -101 212 1 271 231 141 25 chr10 6570458 6570579 -139018709 + MIR SINE MIR 51 185 -77 529 317 0 11 chr10 6570591 6570771 -139018517 + (CA)n Simple_repeat Simple_repeat 2 179 0 225 243 0 0 chr10 6570800 6570870 -139018418 + (CA)n Simple_repeat Simple_repeat 1 70 0 335 248 128 18 chr10 6571898 6572007 -139017281 + MIR3 SINE MIR 73 193 -15 294 323 79 0 chr10 6572640 6572767 -139016521 + L2 LINE L2 3136 3272 0 236 278 33 0 chr10 6572905 6572995 -139016293 + L1PB4 LINE L1 6064 6156 0 2334 100 10 10 chr10 6573044 6573355 -139015933 + AluSx SINE Alu 1 311 -1 32 0 0 0 chr10 6573665 6573697 -139015591 + AT_rich Low_complexity Low_complexity 1 32 0 1666 57 0 0 chr10 6574211 6574404 -139014884 - AluY SINE Alu -13 298 106 1320 105 96 0 chr10 6574900 6575109 -139014179 + MER30 DNA MER1_type 1 229 -1 1764 160 3 7 chr10 6575136 6575423 -139013865 + AluJb SINE Alu 11 296 -16 453 264 16 8 chr10 6575596 6575717 -139013571 - L1MD2 LINE L1 -17 6342 6221 1431 212 67 6 chr10 6575734 6576064 -139013224 - L1MD2 LINE L1 -215 6144 5795 1471 217 47 25 chr10 6576455 6576814 -139012474 + MLT1A2 LTR MaLR 1 367 -7 2471 75 0 7 chr10 6576942 6577248 -139012040 - AluY SINE Alu -7 304 1 1775 170 0 27 chr10 6577893 6578193 -139011095 - AluJo SINE Alu -20 292 1 363 203 14 0 chr10 6578716 6578785 -139010503 - MER8 DNA MER2_type 0 239 170 * 2536 139 59 5 chr10 6578774 6579197 -139010091 + Tigger2 DNA MER2_type 2273 2718 0 2091 100 94 26 chr10 6579204 6579555 -139009733 + THE1C LTR MaLR 1 375 0 2101 116 14 3 chr10 6580002 6580294 -139008994 + AluSx SINE Alu 1 295 -17 1488 108 5 0 chr10 6580543 6580737 -139008551 - AluSp SINE Alu -118 195 1 492 191 35 43 chr10 6580752 6580867 -139008421 - FLAM_A SINE Alu -1 141 28 2286 111 0 0 chr10 6581975 6582272 -139007016 + AluSq SINE Alu 1 297 -16 1817 164 43 27 chr10 6582606 6582977 -139006311 + L1MA8 LINE L1 5639 6015 -276 943 175 18 0 chr10 6582975 6583146 -139006142 + L1MB2 LINE L1 5768 5941 -230 * 332 122 0 0 chr10 6583155 6583204 -139006084 + MADE1 DNA Mariner 26 74 -6 1306 134 29 34 chr10 6583204 6583358 -139005930 + L1MB2 LINE L1 5932 6086 -85 2083 113 48 0 chr10 6583358 6583651 -139005637 - AluSx SINE Alu -4 308 2 1306 134 29 34 chr10 6583651 6583735 -139005553 + L1MB2 LINE L1 6086 6169 -2 219 146 0 0 chr10 6583987 6584028 -139005260 + (CA)n Simple_repeat Simple_repeat 2 42 0 2302 71 7 0 chr10 6584165 6584445 -139004843 + AluSx SINE Alu 29 310 -2 181 356 54 13 chr10 6585396 6585545 -139003743 - MIR SINE MIR -44 218 64 2439 91 0 3 chr10 6585653 6585961 -139003327 - AluSx SINE Alu -5 307 1 2456 74 0 3 chr10 6586422 6586719 -139002569 + AluSc SINE Alu 1 296 -13 2168 110 3 3 chr10 6587711 6588002 -139001286 - AluSc SINE Alu -18 291 1 38262 31 4 0 chr10 6588081 6593380 -138995908 + L1PA3 LINE L1 840 6155 0 242 327 135 18 chr10 6593819 6594146 -138995142 - L2 LINE L2 -817 2497 2133 683 221 25 25 chr10 6595022 6595185 -138994103 + L1MD2 LINE L1 6195 6357 -2 263 221 91 0 chr10 6595486 6595563 -138993725 - MIR SINE MIR -70 192 109 209 267 244 36 chr10 6596602 6596827 -138992461 - L3 LINE CR1 -149 1428 1157 274 266 0 0 chr10 6596827 6596891 -138992397 + L1MD2 LINE L1 6218 6281 -78 481 333 24 51 chr10 6596891 6597224 -138992064 - L3 LINE CR1 -427 1150 827 1427 203 49 7 chr10 6597243 6597529 -138991759 - AluJo SINE Alu -14 298 1 803 199 197 102 chr10 6598751 6599172 -138990116 + MLT1C LTR MaLR 4 464 -3 1990 138 3 22 chr10 6599776 6600087 -138989201 - AluSx SINE Alu -7 305 1 798 130 23 23 chr10 6600121 6600601 -138988687 + (TCCA)n Simple_repeat Simple_repeat 1 480 0 2092 134 0 0 chr10 6602018 6602316 -138986972 + AluSx SINE Alu 1 298 -14 289 312 98 17 chr10 6602495 6602668 -138986620 + L3b LINE CR1 1287 1473 -110 2125 126 7 0 chr10 6603741 6604043 -138985245 - AluSx SINE Alu -8 304 1 396 232 145 7 chr10 6606200 6606338 -138982950 + MIR SINE MIR 47 203 -59 1010 87 0 6 chr10 6606592 6606753 -138982535 + (GA)n Simple_repeat Simple_repeat 1 160 0 277 219 68 14 chr10 6606983 6607056 -138982232 + MIR SINE MIR 68 144 -64 700 192 8 0 chr10 6607224 6607344 -138981944 + FLAM_A SINE Alu 4 124 -9 243 270 0 0 chr10 6608249 6608312 -138980976 + MIR SINE MIR 180 242 -20 532 296 44 52 chr10 6608395 6608645 -138980643 - MER115 DNA AcHobo -1 692 445 262 286 169 0 chr10 6608642 6608719 -138980569 - MER115 DNA AcHobo -426 267 178 * 311 275 11 0 chr10 6608980 6609071 -138980217 + MIR3 SINE MIR 109 200 -8 574 164 27 0 chr10 6609124 6609234 -138980054 + L1MC1 LINE L1 5792 5904 -429 1930 114 88 0 chr10 6609964 6610237 -138979051 + AluSx SINE Alu 1 297 -15 2223 108 3 32 chr10 6610756 6611096 -138978192 + AluSx SINE Alu 1 312 0 2503 76 0 0 chr10 6611322 6611626 -138977662 + AluY SINE Alu 1 304 -7 1512 228 198 92 chr10 6611800 6612002 -138977286 + LTR24B LTR ERV1 1 180 -455 2179 114 7 3 chr10 6612002 6612308 -138976980 - AluSq SINE Alu -6 307 1 1512 228 198 92 chr10 6612308 6612680 -138976608 + LTR24B LTR ERV1 180 635 0 1061 24 87 0 chr10 6615333 6615460 -138973828 - MER85 DNA T2_type -1 138 1 336 303 30 0 chr10 6615883 6616015 -138973273 - L1ME LINE L1 -297 5824 5689 252 323 152 0 chr10 6616541 6616640 -138972648 + L2 LINE L2 3144 3257 -15 2449 89 0 0 chr10 6616881 6617210 -138972078 + AluSx SINE Alu 1 312 0 298 242 156 8 chr10 6617561 6617689 -138971599 + L1ME4a LINE L1 5975 6121 0 2075 102 3 71 chr10 6618943 6619265 -138970023 + AluSx SINE Alu 1 300 -12 256 316 88 20 chr10 6619792 6619963 -138969325 + MIR SINE MIR 23 202 -60 243 239 14 28 chr10 6621267 6621338 -138967950 + CT-rich Low_complexity Low_complexity 2 71 0 961 167 80 0 chr10 6621448 6621610 -138967678 + MLT1B LTR MaLR 3 177 -213 591 218 24 0 chr10 6621613 6621737 -138967551 + FLAM_A SINE Alu 1 127 -15 971 208 9 28 chr10 6621742 6621936 -138967352 + MLT1B LTR MaLR 179 370 -20 2470 120 25 6 chr10 6621936 6622293 -138966995 - THE1B LTR MaLR 0 364 1 971 208 9 28 chr10 6622293 6622314 -138966974 + MLT1B LTR MaLR 370 390 0 1747 170 3 7 chr10 6623427 6623727 -138965561 + AluSx SINE Alu 1 299 -13 1941 129 181 38 chr10 6625614 6626039 -138963249 + MER66B LTR ERV1 1 486 0 2387 90 0 23 chr10 6627011 6627321 -138961967 + AluSx SINE Alu 1 303 -9 218 195 0 0 chr10 6627481 6627522 -138961766 + L2 LINE L2 3213 3253 -19 2326 95 7 0 chr10 6627683 6627979 -138961309 - AluSx SINE Alu -14 298 1 1966 125 7 10 chr10 6628088 6628376 -138960912 - AluJo SINE Alu -25 287 1 203 333 0 0 chr10 6628825 6628888 -138960400 + GA-rich Low_complexity Low_complexity 4 66 0 * 214 328 11 33 chr10 6628842 6629025 -138960263 + G-rich Low_complexity Low_complexity 2 180 0 1648 155 15 92 chr10 6629741 6630076 -138959212 + AluJo SINE Alu 3 311 -1 510 202 64 35 chr10 6631706 6631879 -138957409 - MIR SINE MIR -57 205 28 1210 184 44 41 chr10 6632446 6632766 -138956522 + MER33 DNA MER1_type 4 324 0 257 321 27 27 chr10 6633010 6633122 -138956166 + MIR3 SINE MIR 13 124 -84 519 296 145 37 chr10 6633958 6634529 -138954759 + L2 LINE L2 2070 2702 -612 250 311 110 6 chr10 6634646 6634810 -138954478 + L2 LINE L2 2878 3058 -255 847 187 30 0 chr10 6635063 6635229 -138954059 + L1PB4 LINE L1 5959 6129 -27 2267 127 0 3 chr10 6635229 6635537 -138953751 + AluSx SINE Alu 1 307 -5 26 0 0 0 chr10 6635574 6635600 -138953688 + AT_rich Low_complexity Low_complexity 1 26 0 1252 140 0 0 chr10 6635961 6636140 -138953148 - AluSg/x SINE Alu -3 309 131 24 32 0 0 chr10 6639562 6639593 -138949695 + AT_rich Low_complexity Low_complexity 1 31 0 275 185 17 17 chr10 6639662 6639781 -138949507 + (TA)n Simple_repeat Simple_repeat 2 120 0 2233 110 3 10 chr10 6640835 6641145 -138948143 + AluSp SINE Alu 1 308 -5 24 24 0 24 chr10 6643066 6643086 -138946202 + AT_rich Low_complexity Low_complexity 1 20 -21 1804 164 3 3 chr10 6643086 6643372 -138945916 - AluJo SINE Alu -26 286 1 24 24 0 24 chr10 6643372 6643393 -138945895 + AT_rich Low_complexity Low_complexity 20 41 0 2434 77 3 0 chr10 6644187 6644487 -138944801 - AluY SINE Alu -10 301 1 312 172 0 0 chr10 6644693 6644751 -138944537 + CT-rich Low_complexity Low_complexity 3 60 0 655 148 28 23 chr10 6644767 6644943 -138944345 + CT-rich Low_complexity Low_complexity 3 179 0 1666 181 0 0 chr10 6644968 6645239 -138944049 - AluJb SINE Alu -39 273 3 649 189 30 40 chr10 6645522 6645723 -138943565 - L1MC5 LINE L1 -37 7924 7726 354 59 0 20 chr10 6645730 6645781 -138943507 + U5 snRNA snRNA 6 55 -61 407 204 12 70 chr10 6645781 6645953 -138943335 - L1MC5 LINE L1 -234 7727 7566 245 320 100 27 chr10 6647679 6647829 -138941459 + MIR SINE MIR 31 191 -71 1924 82 0 0 chr10 6648773 6649004 -138940284 - AluSq SINE Alu -82 231 1 389 268 77 22 chr10 6649783 6649966 -138939322 + Charlie2a DNA MER1_type 1694 1886 -976 2370 182 38 5 chr10 6650754 6651200 -138938088 - LOR1b LTR ERV1 0 461 1 180 0 0 0 chr10 6652743 6652763 -138936525 + (A)n Simple_repeat Simple_repeat 1 20 0 265 234 177 42 chr10 6653132 6653324 -138935964 + L2 LINE L2 3000 3217 -96 180 276 112 43 chr10 6654118 6654234 -138935054 + MIR3 SINE MIR 51 174 -34 306 0 0 0 chr10 6656884 6656918 -138932370 + (T)n Simple_repeat Simple_repeat 1 34 0 501 230 146 34 chr10 6657265 6657504 -138931784 + L1ME1 LINE L1 5901 6166 0 31 0 0 0 chr10 6657804 6657835 -138931453 + AT_rich Low_complexity Low_complexity 1 31 0 1818 131 18 4 chr10 6657837 6658140 -138931148 + AluSx SINE Alu 3 309 0 230 337 0 0 chr10 6658193 6658276 -138931012 + L1ME LINE L1 5476 5558 -563 210 191 0 0 chr10 6658295 6658342 -138930946 + (TATG)n Simple_repeat Simple_repeat 4 50 0 3686 181 9 13 chr10 6658623 6659297 -138929991 + LTR51 LTR ERV1 1 671 0 226 331 106 7 chr10 6659413 6659555 -138929733 + L2 LINE L2 2255 2410 -904 220 323 24 24 chr10 6659782 6659949 -138929339 + L2 LINE L2 2892 3058 -214 597 252 38 0 chr10 6660727 6660886 -138928402 + MIR SINE MIR 98 262 0 309 26 0 0 chr10 6661184 6661222 -138928066 + (TTATG)n Simple_repeat Simple_repeat 2 39 0 2271 85 4 0 chr10 6661221 6661537 -138927751 - AluSx SINE Alu 0 317 1 1656 154 45 45 chr10 6662463 6662749 -138926539 + AluJo SINE Alu 1 286 -26 23 68 0 0 chr10 6662754 6662798 -138926490 + AT_rich Low_complexity Low_complexity 1 44 0 241 265 56 104 chr10 6663533 6663734 -138925554 - MIR SINE MIR -42 220 30 290 115 0 19 chr10 6664529 6664581 -138924707 - MADE1 DNA Mariner 0 80 30 975 125 0 0 chr10 6664591 6664719 -138924569 + AluSq/x SINE Alu 1 128 -184 415 39 0 0 chr10 6664732 6664784 -138924504 - MADE1 DNA Mariner -28 52 1 322 250 48 0 chr10 6665333 6665417 -138923871 + MIR SINE MIR 175 262 0 192 77 0 0 chr10 6665564 6665590 -138923698 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 297 277 162 41 chr10 6665608 6666454 -138922834 - L2 LINE L2 -40 3273 2329 1610 238 65 99 chr10 6666854 6667573 -138921715 + LTR34 LTR ERV1 1 695 -4 434 219 10 146 chr10 6668974 6669166 -138920122 + MIR SINE MIR 61 226 -36 479 241 84 12 chr10 6670353 6670519 -138918769 + MER5A DNA MER1_type 6 183 -6 944 164 77 24 chr10 6670610 6670818 -138918470 + MER20 DNA MER1_type 1 219 0 419 310 29 17 chr10 6671126 6671300 -138917988 - MIR3 SINE MIR -23 185 10 183 121 61 0 chr10 6672141 6672174 -138917114 + MER5C DNA MER1_type 289 323 -1 1413 125 128 76 chr10 6672298 6672504 -138916784 - L1MC1 LINE L1 0 6333 6102 2246 104 3 0 chr10 6672504 6672792 -138916496 - AluSx SINE Alu -23 289 1 1413 125 128 76 chr10 6672792 6672913 -138916375 - L1MC1 LINE L1 -231 6102 5989 340 360 91 28 chr10 6672932 6673296 -138915992 + L1MB3 LINE L1 4745 5131 -1015 22 0 0 0 chr10 6673376 6673398 -138915890 + AT_rich Low_complexity Low_complexity 1 22 0 242 205 36 36 chr10 6673403 6673486 -138915802 + L1MB3 LINE L1 5296 5378 -786 471 266 86 9 chr10 6673529 6673802 -138915486 + MER46C DNA MER2_type 1 327 -11 361 310 13 7 chr10 6673846 6674001 -138915287 + L1MB3 LINE L1 5657 5812 -309 339 44 0 0 chr10 6674063 6674108 -138915180 + (TA)n Simple_repeat Simple_repeat 2 46 0 246 312 50 28 chr10 6674259 6674400 -138914888 - MIR SINE MIR -50 212 69 359 179 51 13 chr10 6674799 6674877 -138914411 + MER65B LTR ERV1 1 81 -450 317 258 31 0 chr10 6676695 6676792 -138912496 - MIR SINE MIR -62 146 47 195 42 0 0 chr10 6678077 6678101 -138911187 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1629 105 113 4 chr10 6678104 6678343 -138910945 - AluSx SINE Alu -31 281 17 2834 120 19 1 chr10 6678574 6679048 -138910240 + MER1A DNA MER1_type 1 529 0 542 299 54 50 chr10 6679165 6679463 -138909825 - L3 LINE CR1 -178 1399 1101 4027 191 24 3 chr10 6679508 6680290 -138908998 - L1MB3 LINE L1 -3 6180 5382 421 342 134 23 chr10 6680292 6680768 -138908520 - L3 LINE CR1 -461 1116 588 219 388 109 0 chr10 6680829 6680994 -138908294 - L3 LINE CR1 -1099 478 296 * 228 317 100 22 chr10 6680990 6681220 -138908068 - L3b LINE CR1 -205 1378 1131 234 306 0 0 chr10 6681450 6681512 -138907776 + MIR SINE MIR 86 147 -61 249 33 0 0 chr10 6682671 6682701 -138906587 + (CAAAAA)n Simple_repeat Simple_repeat 3 32 0 2157 110 10 3 chr10 6683922 6684213 -138905075 - AluSg SINE Alu -15 295 3 393 254 49 78 chr10 6684566 6684685 -138904603 - MIR SINE MIR -32 230 118 1772 199 8 18 chr10 6684685 6685026 -138904262 + L1MB3 LINE L1 5795 6133 -50 2136 109 27 3 chr10 6685026 6685320 -138903968 + AluSg SINE Alu 1 301 -9 1772 199 8 18 chr10 6685320 6685370 -138903918 + L1MB3 LINE L1 6133 6182 -1 393 254 49 78 chr10 6685370 6685455 -138903833 - MIR SINE MIR -144 118 32 5976 25 6 0 chr10 6685762 6686452 -138902836 - L1PA3 LINE L1 -1725 4421 3728 8506 21 1 0 chr10 6686452 6688188 -138901100 + L1PA3 LINE L1 4415 6152 -3 471 81 0 0 chr10 6688811 6688873 -138900415 - MADE1 DNA Mariner -1 79 18 3725 172 29 38 chr10 6688879 6688920 -138900368 - L1MB2 LINE L1 -1 6170 6130 2239 98 0 19 chr10 6688920 6689227 -138900061 - AluSx SINE Alu -11 301 1 3725 172 29 38 chr10 6689227 6689577 -138899711 - L1MB2 LINE L1 -41 6130 5778 2021 154 0 0 chr10 6689577 6689869 -138899419 - AluSx SINE Alu -20 292 1 3725 172 29 38 chr10 6689869 6690249 -138899039 - L1MB2 LINE L1 -393 5778 5405 5725 127 4 8 chr10 6690290 6690678 -138898610 - L1PA13 LINE L1 -1 6162 5774 2517 70 3 13 chr10 6690678 6690991 -138898297 - AluY SINE Alu -1 310 1 5725 127 4 8 chr10 6690991 6691500 -138897788 - L1PA13 LINE L1 -389 5774 5263 1772 180 7 10 chr10 6691756 6692062 -138897226 - AluJb SINE Alu -7 305 1 1689 199 119 11 chr10 6692062 6692524 -138896764 - Charlie1b DNA MER1_type -11 512 1 1776 144 0 0 chr10 6692550 6692813 -138896475 + AluJb SINE Alu 48 310 -2 252 284 22 0 chr10 6692857 6692934 -138896354 + CT-rich Low_complexity Low_complexity 3 137 0 303 336 14 14 chr10 6692942 6693085 -138896203 - L1ME LINE L1 -461 5709 5567 386 129 16 0 chr10 6693370 6693432 -138895856 + MIR SINE MIR 81 143 -65 3160 134 87 0 chr10 6694039 6694567 -138894721 + L1PA16 LINE L1 5592 6165 -1 1925 153 3 7 chr10 6695027 6695335 -138893953 + AluSx SINE Alu 5 311 -1 1872 166 0 7 chr10 6695456 6695751 -138893537 + AluJo SINE Alu 14 306 -6 1128 145 128 4 chr10 6695755 6695990 -138893298 + L1MB4 LINE L1 5917 6180 0 202 331 75 23 chr10 6696059 6696192 -138893096 + L2 LINE L2 1278 1417 -1897 2186 110 14 0 chr10 6698663 6698954 -138890334 - AluSx SINE Alu -17 295 1 584 147 10 0 chr10 6699131 6699233 -138890055 - L1MA4A LINE L1 -2 6301 6199 223 290 27 98 chr10 6699235 6699418 -138889870 + L2 LINE L2 3143 3312 -1 2345 98 0 0 chr10 6700053 6700349 -138888939 + AluY SINE Alu 1 296 -15 1806 168 10 7 chr10 6700398 6700695 -138888593 + AluJb SINE Alu 15 312 0 661 268 172 0 chr10 6701990 6702199 -138887089 + MIR SINE MIR 18 262 0 369 232 24 32 chr10 6703026 6703151 -138886137 - L2 LINE L2 -7 3265 3142 517 176 18 115 chr10 6703912 6704077 -138885211 + MLT1F LTR MaLR 388 536 -6 1609 139 78 20 chr10 6707246 6707541 -138881747 + AluSx SINE Alu 1 312 0 21 57 0 0 chr10 6707739 6707774 -138881514 + AT_rich Low_complexity Low_complexity 1 35 0 2347 88 0 3 chr10 6707796 6708093 -138881195 - AluY SINE Alu -15 296 1 349 288 45 45 chr10 6708421 6708553 -138880735 - L2 LINE L2 0 3313 3182 2327 112 0 0 chr10 6709846 6710150 -138879138 - AluSx SINE Alu -8 304 1 1812 163 7 0 chr10 6710824 6711150 -138878138 + AluSx SINE Alu 6 333 0 6049 85 7 7 chr10 6711522 6712335 -138876953 - L1PA10 LINE L1 -4 6164 5352 520 243 132 0 chr10 6712375 6712511 -138876777 + MER112 DNA MER1_type 97 250 -10 1811 146 17 3 chr10 6713130 6713417 -138875871 + AluJb SINE Alu 1 291 -21 462 254 0 9 chr10 6713700 6713814 -138875474 - MER94 DNA DNA -18 116 4 370 243 76 35 chr10 6714266 6714410 -138874878 - L2 LINE L2 -3 3310 3161 3650 192 21 11 chr10 6715007 6715057 -138874231 + L1MB3 LINE L1 5446 5494 -689 2370 98 0 0 chr10 6715057 6715352 -138873936 + AluSc SINE Alu 3 297 -12 3650 192 21 11 chr10 6715352 6716030 -138873258 + L1MB3 LINE L1 5494 6181 -2 507 238 33 50 chr10 6716055 6716236 -138873052 + MIR SINE MIR 14 191 -71 22 0 0 0 chr10 6716344 6716366 -138872922 + AT_rich Low_complexity Low_complexity 1 22 0 195 42 0 0 chr10 6716836 6716860 -138872428 + (CA)n Simple_repeat Simple_repeat 2 25 0 28 0 0 0 chr10 6719475 6719503 -138869785 + GC_rich Low_complexity Low_complexity 1 28 0 22 80 0 0 chr10 6719583 6719633 -138869655 + GC_rich Low_complexity Low_complexity 1 50 0 2075 134 7 0 chr10 6720565 6720857 -138868431 + AluSx SINE Alu 1 294 -18 195 225 0 0 chr10 6721238 6721278 -138868010 + L2 LINE L2 3262 3301 -12 1860 161 0 23 chr10 6721634 6721939 -138867349 - AluJo SINE Alu -14 298 1 453 272 23 46 chr10 6721947 6722120 -138867168 - MIR SINE MIR -55 207 39 2279 92 3 16 chr10 6722158 6722462 -138866826 - AluSx SINE Alu -12 300 1 225 0 0 0 chr10 6723828 6723853 -138865435 + (A)n Simple_repeat Simple_repeat 1 25 0 516 320 39 43 chr10 6724113 6724369 -138864919 - MIR SINE MIR 0 262 8 315 0 0 0 chr10 6725411 6725446 -138863842 + (CA)n Simple_repeat Simple_repeat 2 36 0 28 48 0 0 chr10 6726276 6726318 -138862970 + AT_rich Low_complexity Low_complexity 1 42 0 611 251 49 0 chr10 6726637 6726800 -138862488 - MIR SINE MIR -51 211 41 252 59 0 0 chr10 6726929 6726963 -138862325 + (CA)n Simple_repeat Simple_repeat 1 34 0 229 222 156 0 chr10 6726966 6727056 -138862232 - L1ME4a LINE L1 -56 6065 5962 22 0 0 0 chr10 6727065 6727087 -138862201 + AT_rich Low_complexity Low_complexity 1 22 0 1477 258 107 24 chr10 6728307 6728907 -138860381 + L1ME3A LINE L1 5500 6163 -7 200 252 0 75 chr10 6729216 6729323 -138859965 + CT-rich Low_complexity Low_complexity 1 99 0 2582 122 13 5 chr10 6729781 6730167 -138859121 + L1PB1 LINE L1 5763 6151 0 376 284 20 0 chr10 6731205 6731307 -138857981 + MIR3 SINE MIR 59 162 -46 183 329 0 53 chr10 6733003 6733079 -138856209 + L2 LINE L2 3019 3090 -223 463 276 16 16 chr10 6733155 6733278 -138856010 + L2 LINE L2 3191 3313 0 744 230 45 6 chr10 6733579 6733757 -138855531 - MLT1E2 LTR MaLR 0 626 442 466 299 5 45 chr10 6733967 6734168 -138855120 + L1ME1 LINE L1 5866 6058 -108 207 0 0 0 chr10 6734178 6734201 -138855087 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 1608 132 21 24 chr10 6734223 6734511 -138854777 - L1MA8 LINE L1 -24 6267 5981 424 239 78 25 chr10 6734535 6734655 -138854633 + L1ME2 LINE L1 6045 6178 0 577 189 0 0 chr10 6734747 6734842 -138854446 - L1MB1 LINE L1 -18 6150 6056 326 310 90 19 chr10 6736089 6736244 -138853044 - MIR SINE MIR -73 189 24 3215 155 53 24 chr10 6736648 6737268 -138852020 - L1MA8 LINE L1 -2 6289 5652 1100 182 81 4 chr10 6737849 6738096 -138851192 - L1MA4 LINE L1 -2 6298 6033 1440 127 115 44 chr10 6738096 6738454 -138850834 + MSTA LTR MaLR 1 428 0 225 111 22 0 chr10 6738454 6738499 -138850789 - L1MA4 LINE L1 -263 6037 5992 493 305 69 59 chr10 6738910 6739104 -138850184 - LTR16C LTR ERVL -2 489 289 2204 87 128 42 chr10 6739104 6739439 -138849849 - THE1B LTR MaLR 0 364 1 493 305 69 59 chr10 6739439 6739549 -138849739 - LTR16C LTR ERVL -202 289 182 393 248 16 48 chr10 6739742 6739867 -138849421 - MER117 DNA MER1_type -74 123 3 3717 151 0 6 chr10 6740481 6741010 -138848278 - MER1A DNA MER1_type -1 526 1 216 0 0 0 chr10 6741279 6741303 -138847985 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 400 325 12 30 chr10 6743058 6743227 -138846061 + LTR67 LTR ERVL 389 554 -3 207 0 0 0 chr10 6743542 6743565 -138845723 + (TG)n Simple_repeat Simple_repeat 1 23 0 418 353 22 27 chr10 6743776 6744184 -138845104 + ERVL LTR ERVL 904 1309 -4455 1381 169 98 128 chr10 6744211 6744719 -138844569 - MLT1D LTR MaLR 0 505 13 2446 69 3 0 chr10 6744952 6745255 -138844033 - AluY SINE Alu -7 304 1 245 186 85 0 chr10 6745843 6745902 -138843386 - MIR SINE MIR -2 260 197 2223 88 0 16 chr10 6745902 6746210 -138843078 - AluY SINE Alu -4 307 5 419 265 20 0 chr10 6746448 6746546 -138842742 - MIR SINE MIR -79 129 30 250 324 47 81 chr10 6747715 6748011 -138841277 - L2 LINE L2 -120 3152 2867 200 267 0 33 chr10 6748094 6748154 -138841134 - MIR SINE MIR -35 227 170 785 278 12 0 chr10 6748795 6748968 -138840320 - MER45A DNA AcHobo -1 177 3 220 330 33 0 chr10 6749238 6749329 -138839959 - L3b LINE CR1 -200 1383 1290 476 325 149 44 chr10 6749659 6750114 -138839174 - L2 LINE L2 -3 3310 2808 1236 249 291 29 chr10 6750165 6750795 -138838493 + LTR50 LTR ERVL 1 795 0 470 274 70 35 chr10 6750811 6751012 -138838276 - L2 LINE L2 -843 2471 2264 233 306 51 0 chr10 6751022 6751120 -138838168 - L2 LINE L2 -1223 2091 1989 4670 173 46 20 chr10 6751122 6752490 -138836798 + L1MB8 LINE L1 4768 6176 -2 207 350 81 0 chr10 6752518 6752641 -138836647 - L2 LINE L2 -1317 1997 1865 195 313 31 31 chr10 6752664 6752728 -138836560 - L2 LINE L2 -2048 1266 1203 2222 134 47 33 chr10 6753008 6753367 -138835921 + THE1B LTR MaLR 1 364 0 4782 108 14 47 chr10 6753797 6754540 -138834748 - L1PB1 LINE L1 -2 6149 5432 6749 223 67 103 chr10 6754542 6756036 -138833252 + Charlie6 DNA MER1_type 83 1630 -1870 554 270 0 0 chr10 6756036 6756151 -138833137 + FLAM_A SINE Alu 2 116 -17 2328 60 3 7 chr10 6756152 6756436 -138832852 - L1PA5 LINE L1 -3 6151 5869 1380 138 0 0 chr10 6756441 6756644 -138832644 + AluSg/x SINE Alu 105 307 -5 6749 223 67 103 chr10 6756644 6757470 -138831818 + Charlie6 DNA MER1_type 1634 2521 -979 2663 188 70 4 chr10 6757532 6758047 -138831241 + MER21A LTR ERV1 383 931 0 2371 82 0 3 chr10 6758129 6758432 -138830856 + AluSx SINE Alu 1 302 -10 233 121 0 0 chr10 6758432 6758465 -138830823 - MER41C LTR ERV1 -521 33 1 308 161 118 21 chr10 6758465 6758558 -138830730 - L1PB4 LINE L1 -127 6029 5928 2577 122 0 3 chr10 6758972 6759324 -138829964 - THE1B LTR MaLR 0 364 14 381 143 16 0 chr10 6759312 6759375 -138829913 - THE1B LTR MaLR -300 64 1 * 622 211 44 3 chr10 6760760 6760929 -138828359 - MER69A DNA AcHobo 0 177 4 207 69 0 0 chr10 6760995 6761024 -138828264 + (TG)n Simple_repeat Simple_repeat 1 29 0 1585 192 25 6 chr10 6761078 6761395 -138827893 + MLT1A1 LTR MaLR 1 323 -42 2463 85 66 22 chr10 6761951 6761971 -138827317 + L1PB1 LINE L1 5761 5779 -385 189 0 0 0 chr10 6761971 6761992 -138827296 + (TA)n Simple_repeat Simple_repeat 1 21 0 2463 85 66 22 chr10 6761992 6762359 -138826929 + L1PB1 LINE L1 5779 6164 0 403 151 27 0 chr10 6762796 6762869 -138826419 - MER116 DNA Mariner 0 80 6 1998 118 63 76 chr10 6762889 6763269 -138826019 + THE1C LTR MaLR 1 375 0 2036 158 25 14 chr10 6763844 6764212 -138825076 - L1MB3 LINE L1 -2 6181 5810 2148 144 0 0 chr10 6764266 6764572 -138824716 + AluSx SINE Alu 1 306 -6 348 322 41 0 chr10 6765242 6765363 -138823925 - L2 LINE L2 -1 3271 3146 215 304 55 69 chr10 6766093 6766310 -138822978 - L2 LINE L2 -161 3111 2898 236 234 0 0 chr10 6767093 6767140 -138822148 + L1ME4a LINE L1 5986 6032 -89 1364 252 13 10 chr10 6768854 6769316 -138819972 - MER90 LTR ERV1 -6 569 57 2041 130 0 7 chr10 6769473 6769786 -138819502 + AluSx SINE Alu 1 311 0 2329 164 56 7 chr10 6769952 6770397 -138818891 - L1MA7 LINE L1 0 6291 5825 347 174 138 87 chr10 6770880 6771018 -138818270 - L1ME4a LINE L1 0 6121 5977 200 359 98 0 chr10 6771018 6771110 -138818178 - L2 LINE L2 -8 3264 3164 2053 121 4 0 chr10 6771752 6772051 -138817237 + AluSq SINE Alu 11 313 0 319 196 188 54 chr10 6772909 6773021 -138816267 + MER5A DNA MER1_type 15 141 -48 4147 164 39 1 chr10 6773047 6773743 -138815545 - L1PA16 LINE L1 -9 6157 5436 290 298 18 35 chr10 6774466 6774580 -138814708 - MIR SINE MIR -116 146 35 1055 113 0 7 chr10 6774979 6775130 -138814158 + FRAM SINE Alu 19 168 -8 202 179 104 0 chr10 6775234 6775301 -138813987 - MIR SINE MIR -133 129 56 414 219 75 78 chr10 6775470 6775861 -138813427 + MLT1H LTR MaLR 23 533 -16 184 277 87 103 chr10 6775904 6776088 -138813200 + MIR SINE MIR 49 229 -33 1996 101 25 7 chr10 6777590 6777911 -138811377 + AluSq SINE Alu 1 326 0 401 344 81 18 chr10 6780121 6780342 -138808946 - MIR SINE MIR -2 260 26 1642 167 0 0 chr10 6780402 6780673 -138808615 - AluJo SINE Alu 0 306 36 1273 220 179 27 chr10 6780701 6781114 -138808174 - MER50 LTR ERV1 -19 715 240 281 264 195 0 chr10 6781848 6781935 -138807353 - MER50 LTR ERV1 -614 120 17 257 154 0 0 chr10 6782304 6782343 -138806945 + U2 snRNA snRNA 1 39 -149 465 292 78 5 chr10 6783328 6783520 -138805768 + MIR SINE MIR 47 252 -10 1188 104 12 0 chr10 6783859 6784023 -138805265 + AluSg/x SINE Alu 132 297 -13 2479 144 50 28 chr10 6784217 6784675 -138804613 - L1MB3 LINE L1 0 6183 5716 218 256 39 148 chr10 6785067 6785133 -138804155 - L2 LINE L2 -61 3211 3139 876 179 174 5 chr10 6785133 6785317 -138803971 - MER20 DNA MER1_type 0 219 5 218 256 39 148 chr10 6785317 6785453 -138803835 - L2 LINE L2 -133 3139 3031 3935 174 29 11 chr10 6785594 6785916 -138803372 + MER72 LTR ERV1 9 324 -398 2712 97 14 0 chr10 6785916 6786266 -138803022 + THE1A LTR MaLR 1 355 0 3935 174 29 11 chr10 6786266 6786644 -138802644 + MER72 LTR ERV1 324 721 -1 1870 250 65 55 chr10 6786661 6787349 -138801939 - MER21B LTR ERV1 -109 754 60 383 256 0 0 chr10 6787359 6787437 -138801851 - MER21B LTR ERV1 -765 98 21 498 216 32 64 chr10 6787597 6787722 -138801566 - MER91C DNA MER1_type -19 121 1 2352 91 0 0 chr10 6788170 6788478 -138800810 - AluY SINE Alu -3 308 1 237 285 159 26 chr10 6789970 6790121 -138799167 - MIR SINE MIR -50 212 42 195 139 0 0 chr10 6790538 6790574 -138798714 + (ATG)n Simple_repeat Simple_repeat 3 38 0 246 62 0 0 chr10 6791144 6791176 -138798112 + (TA)n Simple_repeat Simple_repeat 1 32 0 1575 167 15 11 chr10 6791529 6791793 -138797495 - AluJo SINE Alu -47 265 1 318 50 0 0 chr10 6792600 6792640 -138796648 + (CTATT)n Simple_repeat Simple_repeat 4 43 0 1673 160 0 80 chr10 6792646 6792959 -138796329 - AluJo SINE Alu -24 288 1 1811 161 0 55 chr10 6792960 6793290 -138795998 - AluSx SINE Alu 0 312 1 194 362 11 0 chr10 6793495 6793589 -138795699 + MIR SINE MIR 6 100 -162 682 259 93 22 chr10 6793839 6794117 -138795171 - L1M4 LINE L1 -2147 3999 3702 1739 132 19 75 chr10 6794456 6794584 -138794704 + AluJb SINE Alu 1 135 -177 2293 54 4 0 chr10 6794584 6794862 -138794426 + AluY SINE Alu 1 279 -32 1739 132 19 75 chr10 6794862 6795051 -138794237 + AluJb SINE Alu 135 300 -12 269 218 119 50 chr10 6795343 6795444 -138793844 + MIR SINE MIR 72 179 -83 22 35 0 0 chr10 6795631 6795660 -138793628 + AT_rich Low_complexity Low_complexity 1 29 0 959 90 0 7 chr10 6795669 6795814 -138793474 + (TCTA)n Simple_repeat Simple_repeat 1 144 0 242 36 0 0 chr10 6795827 6795855 -138793433 + (A)n Simple_repeat Simple_repeat 1 28 0 235 198 28 38 chr10 6798717 6798823 -138790465 + GA-rich Low_complexity Low_complexity 4 108 0 2422 81 0 0 chr10 6798985 6799282 -138790006 - AluSg SINE Alu -13 297 1 1178 87 6 0 chr10 6799990 6800163 -138789125 + (GGAGA)n Simple_repeat Simple_repeat 2 175 0 22 0 0 0 chr10 6800472 6800494 -138788794 + AT_rich Low_complexity Low_complexity 1 22 0 548 208 87 11 chr10 6800550 6800740 -138788548 + L1ME LINE L1 1357 1671 -4755 2733 232 58 8 chr10 6800748 6801901 -138787387 + L1ME LINE L1 4843 6052 -392 204 97 0 0 chr10 6802121 6802152 -138787136 + (T)n Simple_repeat Simple_repeat 1 31 0 216 0 0 0 chr10 6802929 6802953 -138786335 + (TG)n Simple_repeat Simple_repeat 1 24 0 1078 246 54 81 chr10 6804482 6805015 -138784273 - MER34 LTR ERV1 -23 519 1 1500 218 89 17 chr10 6806331 6806679 -138782609 + MLT1A2 LTR MaLR 1 373 -1 882 207 0 17 chr10 6806711 6806885 -138782403 + FRAM SINE Alu 1 170 -6 911 150 0 0 chr10 6807253 6807373 -138781915 + AluSq/x SINE Alu 1 123 -189 243 0 0 0 chr10 6807373 6807400 -138781888 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 911 150 0 0 chr10 6807400 6807412 -138781876 + AluSq/x SINE Alu 122 133 -179 1939 150 31 0 chr10 6807897 6808191 -138781097 - AluSx SINE Alu -9 303 1 623 225 0 47 chr10 6808219 6808348 -138780940 - FLAM_A SINE Alu -10 123 1 40 37 0 0 chr10 6808938 6808992 -138780296 + AT_rich Low_complexity Low_complexity 1 54 0 2458 54 0 7 chr10 6809107 6809403 -138779885 - AluY SINE Alu -17 294 1 187 349 58 41 chr10 6809446 6809618 -138779670 - MIR SINE MIR -56 206 32 339 345 22 36 chr10 6809647 6809786 -138779502 + MIR SINE MIR 5 141 -121 1971 208 84 2 chr10 6809838 6810280 -138779008 - MER70B LTR ERVL -100 478 1 222 203 47 47 chr10 6811433 6811497 -138777791 + MIR SINE MIR 199 262 0 1555 218 49 16 chr10 6812541 6812908 -138776380 - MLT1B LTR MaLR 0 390 12 414 267 75 43 chr10 6812913 6813081 -138776207 + MLT1I LTR MaLR 14 190 -219 2087 127 73 17 chr10 6813081 6813436 -138775852 + THE1C LTR MaLR 1 375 0 414 267 75 43 chr10 6813436 6813454 -138775834 + MLT1I LTR MaLR 190 206 -203 2171 96 0 17 chr10 6813470 6813761 -138775527 + AluSx SINE Alu 1 286 -26 318 26 0 0 chr10 6813764 6813803 -138775485 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 232 241 84 0 chr10 6813858 6813941 -138775347 + LTR66 LTR ERVL 352 441 -169 808 95 9 0 chr10 6813991 6814096 -138775192 - AluSg/x SINE Alu -17 295 190 225 323 0 0 chr10 6814354 6814416 -138774872 - MIR3 SINE MIR -28 180 119 7624 54 2 5 chr10 6815353 6816499 -138772789 - L1PA5 LINE L1 0 6154 5008 838 258 116 7 chr10 6816619 6816894 -138772394 + MLT1E3 LTR MaLR 317 621 -3 1011 265 75 131 chr10 6816896 6817821 -138771467 - Charlie2b DNA MER1_type -1865 917 45 3585 67 5 7 chr10 6818505 6818954 -138770334 + LTR7 LTR ERV1 1 448 -2 11206 87 18 39 chr10 6818956 6821287 -138768001 + HERVH LTR ERV1 1 2161 -5552 622 60 66 18 chr10 6822082 6822249 -138767039 + (TA)n Simple_repeat Simple_repeat 2 176 0 632 222 146 0 chr10 6823054 6823225 -138766063 + MER3 DNA MER1_type 14 209 0 382 318 117 25 chr10 6824649 6824888 -138764400 + MIR SINE MIR 1 261 -1 959 178 6 6 chr10 6824946 6825126 -138764162 - L1MA9 LINE L1 0 6312 6133 375 123 14 0 chr10 6825133 6825206 -138764082 + L1MDa LINE L1 1258 1331 -5209 309 214 17 79 chr10 6825190 6825309 -138763979 + L1 LINE L1 4262 4375 -1771 * 273 77 0 0 chr10 6827051 6827090 -138762198 + AluSc SINE Alu 255 293 -6 256 241 84 36 chr10 6827083 6827166 -138762122 + Charlie6 DNA MER1_type 3035 3121 -379 * 2194 88 7 0 chr10 6827424 6827698 -138761590 - AluSg SINE Alu -11 299 24 189 281 41 77 chr10 6828167 6828363 -138760925 - L2 LINE L2 -2178 1136 948 1544 189 49 11 chr10 6828778 6829128 -138760160 + MER110A LTR ERV1 55 417 -51 474 277 113 39 chr10 6829207 6829438 -138759850 - MIR SINE MIR -8 254 7 287 260 0 0 chr10 6830405 6830478 -138758810 - MLT1L LTR MaLR -4 611 539 3201 142 41 42 chr10 6830735 6831347 -138757941 - LTR36 LTR ERV1 0 611 1 474 143 65 0 chr10 6831354 6831431 -138757857 + MER31B LTR ERV1 1 82 -384 342 319 43 7 chr10 6831506 6831644 -138757644 - MER87 LTR ERV1 0 541 399 1925 186 44 42 chr10 6831953 6832382 -138756906 + MER67A LTR ERV1 101 530 -13 898 212 103 75 chr10 6832485 6832821 -138756467 - LTR35 LTR ERV1 0 679 188 1320 233 94 8 chr10 6833478 6833860 -138755428 - MER90 LTR ERV1 -2 612 198 35 0 0 0 chr10 6833864 6833899 -138755389 + AT_rich Low_complexity Low_complexity 1 35 0 406 277 18 24 chr10 6833965 6834131 -138755157 - MER90 LTR ERV1 -407 168 4 408 274 49 60 chr10 6834252 6834537 -138754751 - L2 LINE L2 0 3313 3032 2207 125 0 0 chr10 6835024 6835311 -138753977 - AluSx SINE Alu -22 290 4 255 254 0 0 chr10 6835899 6835962 -138753326 - L3 LINE CR1 -124 1453 1391 279 191 0 0 chr10 6835962 6836030 -138753258 + (TG)n Simple_repeat Simple_repeat 1 68 0 2217 135 0 0 chr10 6836201 6836513 -138752775 - AluSx SINE Alu 0 312 1 459 0 0 0 chr10 6836635 6836686 -138752602 + (TA)n Simple_repeat Simple_repeat 1 51 0 211 287 82 25 chr10 6836938 6837060 -138752228 + MIR SINE MIR 134 262 0 3614 49 0 7 chr10 6837541 6837992 -138751296 - LTR7 LTR ERV1 -2 448 1 2564 76 45 13 chr10 6837992 6838372 -138750916 - HERVH LTR ERV1 0 7713 7322 1454 125 19 0 chr10 6838370 6838586 -138750702 - HERVH LTR ERV1 -1894 5819 5600 * 4409 143 1 1 chr10 6838587 6839249 -138750039 - HERVH LTR ERV1 -2564 5149 4488 3303 117 8 10 chr10 6839251 6839754 -138749534 - HERVH LTR ERV1 -3720 3993 3492 948 133 7 0 chr10 6839744 6839894 -138749394 - HERVH LTR ERV1 -4423 3290 3140 * 5360 90 0 18 chr10 6839873 6840642 -138748646 - HERVH LTR ERV1 -4718 2995 2241 370 252 52 0 chr10 6840962 6841077 -138748211 + L1MA1 LINE L1 5817 5937 -365 * 955 51 0 0 chr10 6840995 6841112 -138748176 + L1PB1 LINE L1 5856 5972 -179 6769 59 15 27 chr10 6841114 6841809 -138747479 + L1PA6 LINE L1 4774 5476 -678 2220 115 0 3 chr10 6841809 6842113 -138747175 + AluY SINE Alu 1 303 -8 6769 59 15 27 chr10 6842113 6842430 -138746858 + L1PA6 LINE L1 5476 5795 -359 2377 89 0 22 chr10 6842430 6842746 -138746542 + AluY SINE Alu 1 309 -2 6769 59 15 27 chr10 6842746 6843123 -138746165 + L1PA6 LINE L1 5795 6153 -1 297 239 44 44 chr10 6843430 6843543 -138745745 - MER103 DNA DNA -13 153 41 267 156 0 0 chr10 6843806 6843851 -138745437 + L1ME2 LINE L1 6015 6059 -105 384 274 0 9 chr10 6843888 6843994 -138745294 + L1ME2 LINE L1 6041 6145 -19 217 416 9 0 chr10 6844037 6844150 -138745138 - MIR SINE MIR -68 140 27 2374 87 3 3 chr10 6845195 6845504 -138743784 + AluSg SINE Alu 1 309 -1 1170 112 0 0 chr10 6845819 6845841 -138743447 + (TTCC)n Simple_repeat Simple_repeat 1 200 0 1170 112 0 0 chr10 6845841 6846019 -138743269 + (TTCC)n Simple_repeat Simple_repeat 1 178 0 450 217 19 0 chr10 6846369 6846475 -138742813 - MLT2D LTR ERVL -274 140 33 198 71 0 0 chr10 6846767 6846795 -138742493 + (T)n Simple_repeat Simple_repeat 1 28 0 2685 94 11 5 chr10 6847852 6848225 -138741063 - THE1C LTR MaLR 0 375 1 356 318 155 0 chr10 6848339 6848487 -138740801 - MER5A DNA MER1_type -6 183 13 243 327 158 0 chr10 6848775 6848940 -138740348 - MIR3 SINE MIR -6 202 12 2115 273 73 28 chr10 6849634 6850410 -138738878 + MER63C DNA MER1_type 1 811 -119 575 286 12 30 chr10 6851323 6851491 -138737797 + MLT1F LTR MaLR 3 167 -375 288 255 0 106 chr10 6851584 6851678 -138737610 + MLT1F1 LTR MaLR 155 238 -329 858 225 68 9 chr10 6851713 6851935 -138737353 + MLT1F1 LTR MaLR 331 565 -2 2173 154 25 57 chr10 6852158 6852179 -138737109 - MLT1B LTR MaLR 0 390 370 2469 178 24 0 chr10 6852179 6852595 -138736693 + MSTB LTR MaLR 1 426 0 2173 154 25 57 chr10 6852595 6852976 -138736312 - MLT1B LTR MaLR -20 370 1 263 307 22 16 chr10 6853782 6853902 -138735386 - MIR SINE MIR -65 143 41 235 306 10 31 chr10 6854194 6854292 -138734996 - MIR3 SINE MIR -9 199 104 246 128 0 0 chr10 6854755 6854794 -138734494 + (TTC)n Simple_repeat Simple_repeat 2 40 0 1872 132 0 0 chr10 6854796 6855047 -138734241 - AluSx SINE Alu -61 251 1 1067 60 13 40 chr10 6855856 6856005 -138733283 - L1PA11 LINE L1 -3 6171 6027 225 0 0 0 chr10 6856013 6856038 -138733250 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 2003 138 0 0 chr10 6856040 6856323 -138732965 - AluSq SINE Alu -30 283 1 384 40 0 0 chr10 6857511 6857561 -138731727 + (TG)n Simple_repeat Simple_repeat 2 51 0 762 231 129 0 chr10 6858348 6858534 -138730754 + MER58A DNA MER1_type 4 213 -11 1766 163 3 33 chr10 6858748 6859048 -138730240 - AluSx SINE Alu -17 295 5 3092 182 63 6 chr10 6859140 6859771 -138729517 - LTR65 LTR ERV1 0 669 3 855 119 0 22 chr10 6860236 6860370 -138728918 - L1PB4 LINE L1 0 6156 6026 3035 158 37 27 chr10 6860370 6860932 -138728356 - MER41B LTR ERV1 0 635 68 262 280 206 0 chr10 6861554 6861661 -138727627 + MIR SINE MIR 70 198 -64 253 262 12 0 chr10 6862574 6862658 -138726630 + (CAGAGA)n Simple_repeat Simple_repeat 3 87 0 2297 114 22 30 chr10 6862667 6863034 -138726254 - THE1B LTR MaLR 0 364 1 377 286 36 56 chr10 6864181 6864377 -138724911 + MIR3 SINE MIR 17 208 0 1864 153 7 4 chr10 6864922 6865203 -138724085 + AluJb SINE Alu 1 282 -30 194 0 39 0 chr10 6865206 6865232 -138724056 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 297 183 0 32 chr10 6865283 6865376 -138723912 + CT-rich Low_complexity Low_complexity 2 91 0 287 188 0 0 chr10 6865935 6865983 -138723305 - MLT2B1 LTR ERVL 0 520 473 428 250 0 7 chr10 6865983 6866123 -138723165 + (TG)n Simple_repeat Simple_repeat 1 139 0 1022 212 81 79 chr10 6866123 6866551 -138722737 - MLT2B1 LTR ERVL -41 410 1 24 32 0 0 chr10 6867543 6867574 -138721714 + AT_rich Low_complexity Low_complexity 1 31 0 2458 101 3 0 chr10 6868219 6868556 -138720732 - L1PB1 LINE L1 -4 6147 5810 3968 172 79 24 chr10 6869124 6869907 -138719381 - LTR1B LTR ERV1 0 826 1 237 277 107 27 chr10 6870084 6870196 -138719092 + MIR3 SINE MIR 67 187 -21 555 268 30 25 chr10 6871110 6871308 -138717980 - MIR SINE MIR -55 207 9 4446 158 94 0 chr10 6872537 6873292 -138715996 + LTR1B LTR ERV1 1 826 0 272 280 0 59 chr10 6873424 6873542 -138715746 + L2 LINE L2 3103 3213 -100 276 320 59 39 chr10 6873781 6874037 -138715251 + L1ME LINE L1 5556 5816 -305 363 233 15 79 chr10 6874257 6874408 -138714880 + MIR SINE MIR 51 192 -63 245 328 82 34 chr10 6875980 6876170 -138713118 + L2 LINE L2 3029 3273 -40 251 262 163 73 chr10 6876280 6876513 -138712775 + MLT1H LTR MaLR 97 350 -199 236 200 57 43 chr10 6876527 6876597 -138712691 + MLT1I LTR MaLR 316 386 -23 731 178 3 0 chr10 6876964 6877320 -138711968 + (TG)n Simple_repeat Simple_repeat 1 357 0 390 293 29 32 chr10 6878864 6879103 -138710185 + L1ME4a LINE L1 5668 5904 -217 1556 152 10 37 chr10 6879180 6879476 -138709812 - AluJo SINE Alu -22 290 3 34 24 0 0 chr10 6879654 6879695 -138709593 + AT_rich Low_complexity Low_complexity 1 41 0 2412 67 0 29 chr10 6880008 6880324 -138708964 + AluY SINE Alu 1 307 -4 21 36 0 0 chr10 6880464 6880492 -138708796 + AT_rich Low_complexity Low_complexity 1 28 0 2296 113 3 0 chr10 6881143 6881454 -138707834 + AluSx SINE Alu 1 312 0 1791 219 40 80 chr10 6881775 6882379 -138706909 + MLT1G LTR MaLR 11 590 0 2011 194 90 12 chr10 6883535 6883717 -138705571 + MLT1C LTR MaLR 2 168 -299 261 0 0 0 chr10 6883717 6883746 -138705542 + (CA)n Simple_repeat Simple_repeat 1 29 0 2011 194 90 12 chr10 6883746 6883995 -138705293 + MLT1C LTR MaLR 168 467 0 1610 97 60 0 chr10 6884346 6884563 -138704725 + MER30 DNA MER1_type 1 230 0 468 102 45 0 chr10 6884821 6884909 -138704379 + CT-rich Low_complexity Low_complexity 4 95 0 1248 66 0 16 chr10 6884909 6885092 -138704196 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1993 123 20 3 chr10 6885108 6885400 -138703888 - AluSx SINE Alu -15 297 1 252 59 0 0 chr10 6886548 6886582 -138702706 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 319 303 73 0 chr10 6886583 6886692 -138702596 - L2 LINE L2 -15 3298 3182 406 321 75 0 chr10 6887953 6888087 -138701201 + L2 LINE L2 3129 3272 0 2167 123 7 0 chr10 6888916 6889225 -138700063 - AluSx SINE Alu 0 312 2 2294 176 31 12 chr10 6889467 6889892 -138699396 - MSTB2 LTR MaLR 0 457 25 917 126 6 27 chr10 6890436 6890619 -138698669 + (GGAA)n Simple_repeat Simple_repeat 1 179 0 425 133 19 29 chr10 6890628 6890733 -138698555 + GA-rich Low_complexity Low_complexity 2 105 0 252 184 0 0 chr10 6890877 6890926 -138698362 + GA-rich Low_complexity Low_complexity 4 52 0 196 275 121 33 chr10 6890963 6891054 -138698234 + L2 LINE L2 3171 3269 -3 2028 152 44 46 chr10 6891292 6891842 -138697446 + MLT2A2 LTR ERVL 1 554 0 234 0 0 0 chr10 6892828 6892854 -138696434 + (A)n Simple_repeat Simple_repeat 1 26 0 1454 40 10 25 chr10 6893124 6893326 -138695962 + HERVH LTR ERV1 7515 7713 0 3762 49 0 7 chr10 6893326 6893777 -138695511 + LTR7 LTR ERV1 1 448 -2 2792 184 59 0 chr10 6894291 6894817 -138694471 - MER74A LTR ERVL -1 557 1 303 96 0 0 chr10 6895303 6895355 -138693933 + (TTGG)n Simple_repeat Simple_repeat 4 55 0 1284 77 0 12 chr10 6895356 6895524 -138693764 - L1PA14 LINE L1 -4 6157 5992 247 200 0 57 chr10 6895524 6895594 -138693694 + C-rich Low_complexity Low_complexity 6 71 0 344 180 0 72 chr10 6895600 6895794 -138693494 + CT-rich Low_complexity Low_complexity 1 180 0 426 287 36 24 chr10 6896208 6896375 -138692913 + MER117 DNA MER1_type 22 190 -7 337 245 6 107 chr10 6896533 6896692 -138692596 + L1ME2 LINE L1 5577 5719 -402 1080 201 22 45 chr10 6896745 6896969 -138692319 - MER20 DNA MER1_type 0 219 1 2530 261 54 30 chr10 6897456 6898258 -138691030 - L1MEc LINE L1 -5554 842 22 248 161 35 11 chr10 6898445 6898532 -138690756 + (CATATA)n Simple_repeat Simple_repeat 5 93 0 1942 113 46 0 chr10 6898822 6899105 -138690183 - AluSx SINE Alu -16 296 1 2003 31 18 0 chr10 6899586 6899813 -138689475 - L1PA3 LINE L1 0 6155 5925 518 214 11 11 chr10 6899935 6900113 -138689175 + (CA)n Simple_repeat Simple_repeat 1 178 0 298 209 18 42 chr10 6900126 6900412 -138688876 + (CA)n Simple_repeat Simple_repeat 1 279 0 1366 215 80 43 chr10 6901168 6901605 -138687683 + L1ME2 LINE L1 5698 6150 -14 574 221 124 0 chr10 6902092 6902237 -138687051 - MIR SINE MIR -42 220 58 451 290 45 0 chr10 6902341 6902496 -138686792 - MIR3 SINE MIR -31 177 16 25 31 0 0 chr10 6902501 6902533 -138686755 + AT_rich Low_complexity Low_complexity 1 32 0 305 302 54 23 chr10 6902593 6902722 -138686566 - L3b LINE CR1 -6 1577 1445 1161 260 65 48 chr10 6904354 6905015 -138684273 + L1ME4a LINE L1 4037 4708 -1438 206 309 0 59 chr10 6905133 6905201 -138684087 + L2 LINE L2 3202 3265 -7 291 268 28 0 chr10 6906023 6906094 -138683194 - MLT1J LTR MaLR -335 176 104 268 166 102 25 chr10 6906430 6906549 -138682739 + L1ME4a LINE L1 5264 5392 -754 465 19 0 0 chr10 6907395 6907449 -138681839 + (CA)n Simple_repeat Simple_repeat 2 55 0 631 219 7 15 chr10 6907540 6907677 -138681611 - Charlie4 DNA MER1_type -2 1959 1824 227 79 26 0 chr10 6907903 6907941 -138681347 + (TC)n Simple_repeat Simple_repeat 1 39 0 559 256 50 33 chr10 6908062 6908304 -138680984 + L1ME4a LINE L1 5671 5916 -205 993 150 0 0 chr10 6909219 6909372 -138679916 + L1PA14 LINE L1 5819 5971 -190 1093 114 0 0 chr10 6909472 6909639 -138679649 - HERVH LTR ERV1 -1947 5766 5600 4331 143 9 1 chr10 6909640 6910297 -138678991 - HERVH LTR ERV1 -2564 5149 4488 3224 130 0 12 chr10 6910299 6910799 -138678489 - HERVH LTR ERV1 -3720 3993 3500 * 19440 101 59 57 chr10 6910798 6914080 -138675208 - HERVH LTR ERV1 -4423 3290 1 3724 58 0 7 chr10 6914082 6914533 -138674755 - LTR7 LTR ERV1 -2 448 1 267 299 154 0 chr10 6914553 6914670 -138674618 - L2 LINE L2 0 3313 3179 233 323 42 31 chr10 6915200 6915296 -138673992 - MIR3 SINE MIR -27 181 85 44711 44 2 2 chr10 6915723 6921881 -138667407 - L1PA3 LINE L1 0 6155 1 391 326 176 19 chr10 6922317 6922676 -138666612 + L2 LINE L2 2197 2611 -703 213 39 0 0 chr10 6923742 6923768 -138665520 + (TTTTC)n Simple_repeat Simple_repeat 3 28 0 1814 167 3 19 chr10 6923787 6924104 -138665184 - AluJb SINE Alu 0 312 1 183 279 0 33 chr10 6924229 6924290 -138664998 + L2 LINE L2 3210 3268 -4 21 71 0 0 chr10 6925771 6925813 -138663475 + AT_rich Low_complexity Low_complexity 1 42 0 187 245 0 128 chr10 6925968 6926070 -138663218 - MIR SINE MIR -50 212 124 378 302 47 9 chr10 6926433 6926581 -138662707 + MIR SINE MIR 8 161 -47 206 276 351 0 chr10 6927344 6927478 -138661810 + MER5A DNA MER1_type 9 189 0 2307 115 3 0 chr10 6928120 6928507 -138660781 - AluSq SINE Alu 0 388 1 360 286 71 33 chr10 6928672 6928854 -138660434 + MIR SINE MIR 20 208 -54 2057 149 0 0 chr10 6929024 6929326 -138659962 - AluSx SINE Alu -10 302 1 315 269 59 0 chr10 6930492 6930611 -138658677 - MER76 LTR ERV 0 688 563 456 216 98 26 chr10 6931102 6931296 -138657992 - MER76 LTR ERV -102 586 379 303 213 13 27 chr10 6932358 6932433 -138656855 - MER45A DNA AcHobo 0 178 105 2118 135 3 0 chr10 6932438 6932742 -138656546 + AluSx SINE Alu 1 305 -7 998 204 129 8 chr10 6932761 6933001 -138656287 + AluJo SINE Alu 13 281 -31 424 216 137 0 chr10 6933011 6933113 -138656175 - MER45A DNA AcHobo -61 117 2 1070 157 5 14 chr10 6933751 6933967 -138655321 + L1MA4 LINE L1 6084 6297 -3 2185 98 32 0 chr10 6934402 6934687 -138654601 + AluSq SINE Alu 5 298 -15 507 155 83 0 chr10 6934697 6934781 -138654507 + AluJ/FLAM SINE Alu 1 91 -221 396 281 70 41 chr10 6934975 6935146 -138654142 + L2 LINE L2 3096 3271 -1 24 0 0 0 chr10 6935332 6935356 -138653932 + AT_rich Low_complexity Low_complexity 1 24 0 198 304 0 14 chr10 6935664 6935733 -138653555 + MIR SINE MIR 100 167 -95 7977 67 3 2 chr10 6935756 6936724 -138652564 - LTR5 LTR ERVK 0 969 1 434 63 11 168 chr10 6936724 6936819 -138652469 - SVA Other Other -450 936 857 12928 49 1 0 chr10 6936819 6938479 -138650809 - HERVK LTR ERVK -95 7148 5533 43625 43 4 3 chr10 6938724 6944251 -138645037 - HERVK LTR ERVK -1710 5533 1 7892 78 2 1 chr10 6944251 6945219 -138644069 - LTR5 LTR ERVK 0 969 1 340 125 113 12 chr10 6945603 6945683 -138643605 - MER112 DNA MER1_type -36 224 137 225 338 73 22 chr10 6945945 6946081 -138643207 + MIR SINE MIR 66 208 -54 180 0 0 0 chr10 6946116 6946136 -138643152 + (TG)n Simple_repeat Simple_repeat 1 20 0 258 195 47 47 chr10 6946354 6946523 -138642765 + (TA)n Simple_repeat Simple_repeat 2 170 0 * 564 279 0 0 chr10 6946518 6946697 -138642591 + (CATATA)n Simple_repeat Simple_repeat 2 180 0 543 283 0 0 chr10 6946669 6946849 -138642439 + (TA)n Simple_repeat Simple_repeat 1 180 0 * 279 268 0 0 chr10 6946867 6947046 -138642242 + (TA)n Simple_repeat Simple_repeat 1 179 0 466 174 48 0 chr10 6947113 6947280 -138642008 + (TA)n Simple_repeat Simple_repeat 1 175 0 257 209 44 0 chr10 6947296 6947454 -138641834 + (TA)n Simple_repeat Simple_repeat 1 165 0 415 189 28 33 chr10 6947474 6947654 -138641634 + (TA)n Simple_repeat Simple_repeat 1 179 0 471 193 17 28 chr10 6947679 6947860 -138641428 + (TA)n Simple_repeat Simple_repeat 2 180 0 249 222 22 22 chr10 6947875 6947965 -138641323 + L1MC4 LINE L1 6614 6703 -1339 664 231 17 6 chr10 6947976 6948334 -138640954 + (TA)n Simple_repeat Simple_repeat 1 362 0 374 188 44 0 chr10 6948404 6948564 -138640724 + (TA)n Simple_repeat Simple_repeat 2 168 0 564 214 0 0 chr10 6948579 6948757 -138640531 + (TA)n Simple_repeat Simple_repeat 2 179 0 312 284 0 0 chr10 6948759 6948847 -138640441 + L1MC4 LINE L1 6616 6703 -1339 239 381 102 0 chr10 6949573 6949691 -138639597 - L2 LINE L2 -5 3267 3138 242 275 0 12 chr10 6950703 6950783 -138638505 - L1M4 LINE L1 -1537 4609 4531 256 281 216 45 chr10 6950820 6951019 -138638269 + L2 LINE L2 3080 3312 -1 213 366 11 21 chr10 6952373 6952466 -138636822 + MIR SINE MIR 30 121 -87 2231 118 170 5 chr10 6953633 6954050 -138635238 + LTR19A LTR ERV1 1 486 0 384 313 154 5 chr10 6954222 6954436 -138634852 - MIR SINE MIR -2 260 15 200 320 26 13 chr10 6955411 6955489 -138633799 - MIR3 SINE MIR -23 185 107 1542 101 38 0 chr10 6956250 6956459 -138632829 + AluSq SINE Alu 91 307 -6 3577 216 102 49 chr10 6956477 6957425 -138631863 + Charlie1a DNA MER1_type 56 1097 -1664 1049 23 78 0 chr10 6957425 6957554 -138631734 + MER85 DNA T2_type 1 139 0 3577 216 102 49 chr10 6957554 6957934 -138631354 + Charlie1a DNA MER1_type 1097 1455 0 677 272 27 13 chr10 6957962 6958186 -138631102 + L2 LINE L2 3085 3311 -2 225 303 137 63 chr10 6958622 6958797 -138630491 + L3 LINE CR1 879 1066 -511 338 330 140 28 chr10 6958822 6959143 -138630145 + L3 LINE CR1 1171 1527 -50 2159 96 11 0 chr10 6959283 6959564 -138629724 - AluSp SINE Alu -29 284 1 2071 158 3 0 chr10 6959931 6960241 -138629047 - AluJb SINE Alu -1 311 1 1943 240 58 24 chr10 6960521 6961262 -138628026 + L1M4 LINE L1 4310 5075 -1071 296 230 118 31 chr10 6961320 6961484 -138627804 + L1MDa LINE L1 1798 1992 -909 370 226 9 0 chr10 6961487 6961593 -138627695 + L1M4 LINE L1 5106 5212 -934 1174 186 79 28 chr10 6961594 6961847 -138627441 - AluJo SINE Alu -46 266 1 689 88 18 9 chr10 6961849 6961962 -138627326 + Tigger3(Golem) DNA MER2_type 2767 2880 -149 22 0 0 0 chr10 6962343 6962365 -138626923 + AT_rich Low_complexity Low_complexity 1 22 0 231 200 27 13 chr10 6962844 6962919 -138626369 - L1ME4a LINE L1 -2 6119 6044 1871 129 14 0 chr10 6963526 6963806 -138625482 + AluSx SINE Alu 1 284 -28 252 0 0 0 chr10 6963806 6963834 -138625454 + (TA)n Simple_repeat Simple_repeat 2 29 0 364 259 49 63 chr10 6964664 6964807 -138624481 - MIR SINE MIR -55 207 67 2134 118 7 0 chr10 6964961 6965257 -138624031 + AluSq SINE Alu 1 298 -15 283 200 124 0 chr10 6965357 6965462 -138623826 - L1ME4a LINE L1 -44 6077 5960 1973 165 14 6 chr10 6965580 6965943 -138623345 - L1MB1 LINE L1 -4 6164 5799 432 0 0 0 chr10 6965943 6965991 -138623297 + (CA)n Simple_repeat Simple_repeat 1 48 0 2143 168 8 26 chr10 6965995 6966647 -138622641 - L1MB1 LINE L1 -503 5665 5025 525 307 4 12 chr10 6966651 6966895 -138622393 - L1ME4a LINE L1 -297 5824 5583 262 259 17 0 chr10 6967923 6967981 -138621307 - MER91A DNA MER1_type -106 90 32 205 259 94 24 chr10 6968006 6968091 -138621197 + MIR SINE MIR 1 91 -171 221 311 30 52 chr10 6968144 6968279 -138621009 + L3 LINE CR1 1298 1429 -148 354 91 0 0 chr10 6968678 6968733 -138620555 + (TG)n Simple_repeat Simple_repeat 2 56 0 229 308 13 26 chr10 6969483 6969561 -138619727 + MIR3 SINE MIR 84 160 -48 189 0 0 0 chr10 6969628 6969649 -138619639 + (TTA)n Simple_repeat Simple_repeat 2 22 0 978 25 0 17 chr10 6969681 6969801 -138619487 - L1PA3 LINE L1 -1 6154 6037 22070 27 0 0 chr10 6969801 6973174 -138616114 + L1PA2 LINE L1 2643 6057 -98 2980 204 55 48 chr10 6973198 6974147 -138615141 - L1MC3 LINE L1 -7 7778 6824 699 202 165 77 chr10 6974395 6974850 -138614438 - MER66A LTR ERV1 -52 435 100 583 215 0 0 chr10 6975324 6975431 -138613857 - MER5A DNA MER1_type -82 107 1 306 363 108 20 chr10 6975918 6976122 -138613166 - L2 LINE L2 -1 3271 3050 2364 109 3 0 chr10 6976212 6976524 -138612764 - AluSq SINE Alu 0 313 1 184 146 21 21 chr10 6977706 6977754 -138611534 + CT-rich Low_complexity Low_complexity 3 50 0 1072 110 0 11 chr10 6977992 6978174 -138611114 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 303 175 0 0 chr10 6978178 6978235 -138611053 + CT-rich Low_complexity Low_complexity 2 58 0 298 332 133 13 chr10 6980422 6980732 -138608556 + L2 LINE L2 2798 3233 -39 2205 144 67 22 chr10 6980754 6981133 -138608155 + L1MB3 LINE L1 5739 6140 -43 2274 89 0 30 chr10 6981133 6981435 -138607853 + AluSx SINE Alu 1 293 -19 2205 144 67 22 chr10 6981435 6981472 -138607816 + L1MB3 LINE L1 6140 6174 -9 256 276 149 11 chr10 6982131 6982218 -138607070 - L2 LINE L2 -10 3262 3164 1891 115 0 14 chr10 6982616 6982895 -138606393 - AluSx SINE Alu 0 312 38 2482 138 53 19 chr10 6983280 6983693 -138605595 - MSTA LTR MaLR 0 428 2 354 237 30 46 chr10 6983948 6984079 -138605209 - MLT1K LTR MaLR -14 574 446 243 259 24 47 chr10 6984172 6984257 -138605031 - MLT1K LTR MaLR -341 247 165 187 290 43 29 chr10 6984709 6984778 -138604510 + L2 LINE L2 2970 3039 -274 364 289 79 9 chr10 6985079 6985193 -138604095 + L2 LINE L2 3192 3313 0 2076 101 17 10 chr10 6985215 6985512 -138603776 - AluSx SINE Alu -13 299 1 330 26 0 0 chr10 6986235 6986274 -138603014 + (CA)n Simple_repeat Simple_repeat 2 40 0 243 297 27 27 chr10 6986359 6986470 -138602818 - MIR SINE MIR -92 170 60 1718 164 25 0 chr10 6987383 6987663 -138601625 + AluJo SINE Alu 1 287 -25 276 53 0 0 chr10 6987665 6987703 -138601585 + (TC)n Simple_repeat Simple_repeat 1 38 0 1384 284 34 27 chr10 6987716 6988308 -138600980 - MER74B LTR ERVL -14 608 13 267 284 136 52 chr10 6989596 6989751 -138599537 - MIR3 SINE MIR -21 187 20 2182 124 7 0 chr10 6990328 6990635 -138598653 + AluSg SINE Alu 1 309 -1 345 261 0 0 chr10 6991257 6991345 -138597943 - L2 LINE L2 -1 3312 3225 1758 159 24 7 chr10 6992116 6992406 -138596882 - AluJb SINE Alu -17 295 1 208 336 133 9 chr10 6992704 6992817 -138596471 + MIR SINE MIR 26 152 -110 2093 100 24 0 chr10 6993488 6993777 -138595511 + AluY SINE Alu 1 296 -15 2459 196 30 2 chr10 6994628 6994739 -138594549 + LOR1a LTR ERV1 1 107 -390 2287 123 0 0 chr10 6994739 6995047 -138594241 - AluSx SINE Alu -4 308 1 2459 196 30 2 chr10 6995047 6995410 -138593878 + LOR1a LTR ERV1 107 488 -9 237 232 29 43 chr10 6995980 6996049 -138593239 + MER5B DNA MER1_type 1 68 -110 675 236 133 5 chr10 6996054 6996249 -138593039 + L1M4 LINE L1 4716 4935 -1211 257 318 40 103 chr10 6996601 6996752 -138592536 + MIR SINE MIR 54 188 -74 2145 137 0 0 chr10 6996752 6997059 -138592229 - AluSx SINE Alu -5 307 1 257 318 40 103 chr10 6997059 6997130 -138592158 + MIR SINE MIR 188 262 0 214 365 14 73 chr10 6997346 6997518 -138591770 + MIR SINE MIR 31 189 -73 2450 145 0 0 chr10 6997518 6997855 -138591433 + MER1B DNA MER1_type 1 337 0 214 365 14 73 chr10 6997855 6997901 -138591387 + MIR SINE MIR 189 236 -26 1590 129 22 0 chr10 6998035 6998260 -138591028 - MER30 DNA MER1_type 0 230 1 197 300 67 11 chr10 6998260 6998344 -138590944 - MIR3 SINE MIR -12 196 108 39 84 0 0 chr10 6998804 6998899 -138590389 + AT_rich Low_complexity Low_complexity 1 95 0 203 295 168 32 chr10 6999042 6999137 -138590151 + MIR SINE MIR 37 144 -64 217 269 281 44 chr10 7000051 7000211 -138589077 - MIR3 SINE MIR -5 203 6 813 210 0 31 chr10 7000232 7000394 -138588894 + AluJo SINE Alu 126 282 -30 24 0 0 0 chr10 7000394 7000418 -138588870 + AT_rich Low_complexity Low_complexity 1 24 0 271 218 0 0 chr10 7000517 7000572 -138588716 - L1MC4 LINE L1 -1 8041 7987 1014 254 196 42 chr10 7000574 7001144 -138588144 - L1MC4 LINE L1 -144 7898 7241 1194 240 80 27 chr10 7001149 7001627 -138587661 - L1MC4 LINE L1 -810 7083 6500 295 178 14 14 chr10 7001635 7001708 -138587580 + CT-rich Low_complexity Low_complexity 3 75 0 357 240 7 32 chr10 7001708 7001818 -138587470 - L1MC4 LINE L1 -1454 6549 6431 827 204 4 116 chr10 7002624 7002873 -138586415 - MLT1B LTR MaLR -2 388 168 405 193 148 0 chr10 7002873 7002961 -138586327 + LOR1b LTR ERV1 1 101 -360 766 256 9 9 chr10 7002970 7003181 -138586107 + L1PBa LINE L1 6 216 -6647 * 2323 156 8 18 chr10 7003158 7003589 -138585699 + L1PBa LINE L1 1392 1902 -4960 180 0 0 0 chr10 7004328 7004348 -138584940 + (T)n Simple_repeat Simple_repeat 1 20 0 294 58 0 58 chr10 7004533 7004585 -138584703 - FAM SINE Alu 0 179 131 886 165 0 0 chr10 7004601 7004734 -138584554 - FLAM_C SINE Alu 0 133 1 325 220 92 18 chr10 7005282 7005391 -138583897 - MER91A DNA MER1_type -25 171 55 218 190 0 17 chr10 7006388 7006446 -138582842 + CT-rich Low_complexity Low_complexity 4 60 0 360 0 0 0 chr10 7007916 7007956 -138581332 + (TG)n Simple_repeat Simple_repeat 2 41 0 843 300 80 34 chr10 7010034 7010648 -138578640 - HAL1b LINE L1 -475 873 232 2035 114 11 0 chr10 7010697 7011134 -138578154 + AluSx SINE Alu 1 440 0 646 164 68 41 chr10 7012254 7012348 -138576940 + MER39 LTR ERV1 558 659 -48 2684 163 19 0 chr10 7012348 7012766 -138576522 - MSTB LTR MaLR 0 426 1 646 164 68 41 chr10 7012766 7012817 -138576471 + MER39 LTR ERV1 659 707 0 690 198 52 66 chr10 7014435 7014647 -138574641 + MER39 LTR ERV1 393 601 -106 838 52 0 0 chr10 7014647 7014743 -138574545 + AluYb8 SINE Alu 10 105 -213 1265 113 0 0 chr10 7014844 7015012 -138574276 - AluSx SINE Alu -144 168 1 453 298 6 38 chr10 7015746 7015904 -138573384 + MIR SINE MIR 2 154 -108 915 164 224 27 chr10 7016247 7016430 -138572858 - MER20 DNA MER1_type 0 219 1 184 324 14 14 chr10 7016573 7016647 -138572641 + L2 LINE L2 2682 2755 -559 319 133 0 27 chr10 7016774 7016849 -138572439 + (CA)n Simple_repeat Simple_repeat 2 74 0 323 350 108 54 chr10 7016853 7017224 -138572064 + L2 LINE L2 2874 3264 -8 410 304 89 54 chr10 7017983 7018107 -138571181 + MIR SINE MIR 31 168 -94 197 65 32 0 chr10 7018107 7018138 -138571150 + (TAGA)n Simple_repeat Simple_repeat 1 32 0 410 304 89 54 chr10 7018138 7018237 -138571051 + MIR SINE MIR 168 262 0 717 45 18 9 chr10 7018381 7018492 -138570796 + (GA)n Simple_repeat Simple_repeat 1 112 0 297 244 62 62 chr10 7019278 7019438 -138569850 + MIR SINE MIR 48 207 -55 203 297 63 92 chr10 7020740 7020979 -138568309 - L2 LINE L2 -108 3164 2933 854 144 8 0 chr10 7021010 7021142 -138568146 - MER4A LTR ERV1 0 664 532 876 324 57 0 chr10 7021151 7021487 -138567801 - L2 LINE L2 -942 2372 2018 243 302 47 81 chr10 7021750 7021786 -138567502 + L3 LINE CR1 1432 1468 -109 1637 202 125 46 chr10 7021786 7022266 -138567022 - MLT2B1 LTR ERVL -2 518 1 243 302 47 81 chr10 7022266 7022378 -138566910 + L3 LINE CR1 1468 1575 -2 2184 120 7 7 chr10 7022430 7022739 -138566549 + AluSx SINE Alu 1 309 -3 2258 88 0 7 chr10 7023926 7024231 -138565057 + AluSc SINE Alu 1 303 -6 207 0 0 0 chr10 7024330 7024353 -138564935 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr10 7024417 7024439 -138564849 + AT_rich Low_complexity Low_complexity 1 22 0 855 300 31 28 chr10 7024610 7024963 -138564325 - L1MC4a LINE L1 -1866 5942 5589 427 332 69 40 chr10 7024975 7025725 -138563563 - L1MC4a LINE L1 -1699 4447 3676 3687 244 64 24 chr10 7025922 7026035 -138563253 + L1ME2 LINE L1 4145 4252 -1912 1889 116 4 0 chr10 7026035 7026303 -138562985 + AluSx SINE Alu 44 312 0 3687 244 64 24 chr10 7026303 7026546 -138562742 + L1ME2 LINE L1 4252 4484 -1680 2105 142 49 27 chr10 7026546 7026912 -138562376 - THE1C LTR MaLR -1 374 1 3687 244 64 24 chr10 7026912 7028505 -138560783 + L1ME2 LINE L1 4484 6164 0 637 311 121 34 chr10 7028556 7029118 -138560170 + L1ME4a LINE L1 5499 6109 -12 564 327 133 7 chr10 7029777 7030055 -138559233 + L3b LINE CR1 1171 1483 -100 2495 185 150 28 chr10 7030278 7031116 -138558172 - LTR28 LTR ERV1 0 1020 3 200 196 0 18 chr10 7032342 7032398 -138556890 + GA-rich Low_complexity Low_complexity 2 56 0 463 287 0 0 chr10 7032416 7032524 -138556764 + MER34 LTR ERV1 1 108 -434 * 750 267 40 63 chr10 7032506 7033032 -138556256 + MER34 LTR ERV1 34 540 -2 515 272 44 81 chr10 7033629 7033663 -138555625 + MIR SINE MIR 1 35 -227 2175 129 3 3 chr10 7033663 7033974 -138555314 + AluSq SINE Alu 1 311 -2 515 272 44 81 chr10 7033974 7034129 -138555159 + MIR SINE MIR 35 180 -82 1911 151 7 7 chr10 7034129 7034427 -138554861 + AluJo SINE Alu 7 304 -8 515 272 44 81 chr10 7034427 7034508 -138554780 + MIR SINE MIR 180 262 0 2159 115 0 38 chr10 7034669 7034983 -138554305 + AluSx SINE Alu 1 302 -10 1983 132 3 3 chr10 7035241 7035536 -138553752 - AluSc SINE Alu -14 295 1 681 146 18 9 chr10 7036352 7036462 -138552826 + MSTB LTR MaLR 2 112 -314 1839 73 146 137 chr10 7036466 7037024 -138552264 - LTR12 LTR ERV1 0 714 5 1639 195 26 3 chr10 7037024 7037326 -138551962 + MSTB LTR MaLR 118 426 0 2643 159 33 7 chr10 7037326 7037779 -138551509 - Tigger5 DNA MER2_type -24 2299 1835 1048 186 68 41 chr10 7037771 7037991 -138551297 - Tigger5 DNA MER2_type -2097 226 1 * 1452 190 93 22 chr10 7037997 7038318 -138550970 - MER2 DNA MER2_type 0 344 1 281 301 36 12 chr10 7038513 7038596 -138550692 + L2 LINE L2 2989 3073 -199 201 74 0 0 chr10 7038806 7038833 -138550455 + (TGAA)n Simple_repeat Simple_repeat 4 30 0 1600 161 169 21 chr10 7038898 7039270 -138550018 + MSTC LTR MaLR 2 428 0 282 29 0 0 chr10 7039758 7039793 -138549495 + (GA)n Simple_repeat Simple_repeat 2 36 0 584 234 51 13 chr10 7040163 7040321 -138548967 + MER5B DNA MER1_type 1 164 -14 411 259 20 26 chr10 7040390 7040538 -138548750 + MER21B LTR ERV1 17 197 -408 1400 296 54 51 chr10 7040596 7041188 -138548100 + MER21B LTR ERV1 159 752 -111 874 166 13 26 chr10 7041201 7041352 -138547936 - MER63 DNA MER1_type -56 780 6 949 192 0 0 chr10 7042273 7042424 -138546864 + FRAM SINE Alu 4 154 -12 201 74 0 0 chr10 7042482 7042509 -138546779 + (CA)n Simple_repeat Simple_repeat 2 28 0 901 228 67 0 chr10 7042693 7042886 -138546402 + MER3 DNA MER1_type 4 209 0 2254 180 5 18 chr10 7042947 7043341 -138545947 - MLT1B LTR MaLR -1 389 1 2201 127 0 0 chr10 7043781 7044081 -138545207 - AluSx SINE Alu -12 300 1 256 227 27 40 chr10 7044384 7044459 -138544829 + MIR SINE MIR 189 262 0 463 321 77 47 chr10 7044740 7045482 -138543806 - L1M4 LINE L1 -1699 4447 3684 385 311 78 15 chr10 7045522 7045792 -138543496 - L1M4 LINE L1 -2731 3415 3129 534 161 200 89 chr10 7045969 7046118 -138543170 + MER3 DNA MER1_type 1 175 -34 2399 90 7 0 chr10 7046118 7046417 -138542871 + AluSc SINE Alu 1 301 -8 534 161 200 89 chr10 7046417 7046447 -138542841 + MER3 DNA MER1_type 175 200 -9 191 141 51 0 chr10 7046567 7046645 -138542643 + (TA)n Simple_repeat Simple_repeat 2 83 0 941 158 13 6 chr10 7047355 7047513 -138541775 + AluSg/x SINE Alu 146 304 -8 256 310 207 19 chr10 7047633 7047846 -138541442 + MIR SINE MIR 1 253 -9 967 229 128 81 chr10 7048476 7048983 -138540305 - MER34B LTR ERV1 0 565 35 836 189 78 0 chr10 7049001 7049154 -138540134 - MER58A DNA MER1_type -34 190 26 21 36 0 0 chr10 7049236 7049264 -138540024 + AT_rich Low_complexity Low_complexity 1 28 0 441 322 46 66 chr10 7049507 7049924 -138539364 + L2 LINE L2 2196 2681 -633 1908 173 0 3 chr10 7049924 7050237 -138539051 + AluJb SINE Alu 1 312 0 441 322 46 66 chr10 7050237 7050308 -138538980 + L2 LINE L2 2681 2752 -562 6197 17 6 0 chr10 7050308 7051454 -138537834 + L1PA3 LINE L1 4812 5961 -194 289 336 55 23 chr10 7052027 7052155 -138537133 + L2 LINE L2 3134 3265 -7 2125 138 7 0 chr10 7052205 7052509 -138536779 + AluSx SINE Alu 1 306 -6 2256 116 3 0 chr10 7052518 7052819 -138536469 + AluSx SINE Alu 1 302 -10 21 0 0 0 chr10 7053437 7053458 -138535830 + AT_rich Low_complexity Low_complexity 1 21 0 3504 117 71 11 chr10 7053761 7054284 -138535004 + MER41C LTR ERV1 1 554 0 220 283 17 0 chr10 7054431 7054491 -138534797 + CT-rich Low_complexity Low_complexity 2 62 0 192 343 45 0 chr10 7055175 7055242 -138534046 + MIR SINE MIR 41 110 -152 5377 191 17 27 chr10 7055520 7057165 -138532123 + L1PB3 LINE L1 4177 5793 -361 198 0 0 0 chr10 7057165 7057187 -138532101 + (TA)n Simple_repeat Simple_repeat 2 23 0 5377 191 17 27 chr10 7057187 7057546 -138531742 + L1PB3 LINE L1 5793 6154 0 3204 161 49 12 chr10 7057563 7058133 -138531155 + L1MB3 LINE L1 5586 6176 -7 1354 167 42 141 chr10 7058318 7058750 -138530538 - MLT1B LTR MaLR -1 389 1 2427 118 49 26 chr10 7059109 7059311 -138529977 + L1PB2 LINE L1 5748 5944 -207 2892 91 8 6 chr10 7059311 7059674 -138529614 - THE1B LTR MaLR 0 364 1 2427 118 49 26 chr10 7059674 7059862 -138529426 + L1PB2 LINE L1 5944 6147 -4 231 315 0 0 chr10 7060283 7060356 -138528932 + (CA)n Simple_repeat Simple_repeat 2 74 0 1296 150 4 26 chr10 7061748 7061981 -138527307 + AluJb SINE Alu 85 312 0 679 226 14 2 chr10 7062950 7063161 -138526127 + MLT1C LTR MaLR 223 467 0 219 363 60 27 chr10 7063187 7063520 -138525768 - L2 LINE L2 -840 2474 2131 836 251 69 20 chr10 7064359 7064850 -138524438 + MLT1E3 LTR MaLR 60 620 -4 219 186 0 0 chr10 7064997 7065040 -138524248 - L2 LINE L2 0 3313 3271 925 193 33 47 chr10 7066574 7066786 -138522502 + AluJo SINE Alu 1 209 -103 225 439 9 0 chr10 7066883 7066997 -138522291 + L2 LINE L2 3139 3253 -19 258 281 162 12 chr10 7068112 7068279 -138521009 - L1MC/D LINE L1 -1953 5855 5664 23 0 0 0 chr10 7068549 7068572 -138520716 + AT_rich Low_complexity Low_complexity 1 23 0 615 273 24 75 chr10 7068788 7069054 -138520234 + MIR SINE MIR 5 258 -4 271 314 0 0 chr10 7070194 7070264 -138519024 - L2 LINE L2 -18 3254 3185 805 113 9 9 chr10 7070271 7070386 -138518902 - THE1B LTR MaLR -8 356 242 419 276 134 42 chr10 7070414 7070875 -138518413 - L2 LINE L2 -221 3092 2594 2124 139 0 13 chr10 7072225 7072541 -138516747 + AluSx SINE Alu 1 312 0 400 325 64 43 chr10 7072734 7073014 -138516274 - L1ME LINE L1 -408 5754 5469 1502 186 25 94 chr10 7073069 7073194 -138516094 + MLT1A1 LTR MaLR 1 133 -232 2461 126 31 20 chr10 7073194 7073552 -138515736 + THE1B LTR MaLR 1 362 -2 1502 186 25 94 chr10 7073552 7073818 -138515470 + MLT1A1 LTR MaLR 133 365 0 391 224 51 10 chr10 7073845 7073943 -138515345 + L1MC3 LINE L1 7663 7764 -21 245 294 0 9 chr10 7073990 7074099 -138515189 - L1ME LINE L1 -2408 5400 5293 1423 197 67 54 chr10 7074321 7074692 -138514596 - MLT1B LTR MaLR 0 390 15 295 325 101 37 chr10 7076406 7076594 -138512694 - MIR SINE MIR -14 248 49 4872 227 34 12 chr10 7076603 7078193 -138511095 + L1PB1 LINE L1 4150 5794 -357 1050 53 0 0 chr10 7078193 7078326 -138510962 + (TA)n Simple_repeat Simple_repeat 2 134 0 4872 227 34 12 chr10 7078326 7078692 -138510596 + L1PB1 LINE L1 5794 6151 0 889 207 58 11 chr10 7078848 7079036 -138510252 - MER58A DNA MER1_type -15 209 13 1497 262 33 9 chr10 7080532 7081030 -138508258 - MER90 LTR ERV1 -23 591 5 1554 186 60 23 chr10 7081034 7081384 -138507904 + MER45B DNA AcHobo 678 1040 0 525 315 41 10 chr10 7082742 7082939 -138506349 - MIR SINE MIR -55 207 5 427 323 52 39 chr10 7083947 7084102 -138505186 + MIR3 SINE MIR 38 194 -14 181 250 23 0 chr10 7084227 7084271 -138505017 + MIR SINE MIR 93 137 -71 * 207 320 124 0 chr10 7084267 7084364 -138504924 - L2 LINE L2 -43 3229 3121 * 292 261 0 0 chr10 7084343 7084408 -138504880 + MIR3 SINE MIR 143 207 -1 281 296 112 20 chr10 7085211 7085363 -138503925 + MIR SINE MIR 27 192 -70 2681 121 48 10 chr10 7085407 7085819 -138503469 + MSTA LTR MaLR 1 428 0 405 123 0 0 chr10 7087501 7087566 -138501722 + (TGAA)n Simple_repeat Simple_repeat 3 67 0 266 287 40 20 chr10 7087728 7087829 -138501459 - MIR3 SINE MIR -30 178 76 1028 255 91 31 chr10 7088022 7088442 -138500846 - HsTC2 DNA Tc2 -3 1895 1275 1660 267 26 20 chr10 7088465 7088963 -138500325 - HsTC2 DNA Tc2 -1394 504 4 977 210 0 0 chr10 7089096 7089258 -138500030 - FRAM SINE Alu -3 163 2 432 272 83 30 chr10 7089299 7089468 -138499820 + MER5B DNA MER1_type 1 178 0 1363 183 31 0 chr10 7090239 7090496 -138498792 - L1MA4 LINE L1 -14 6286 6022 427 164 33 90 chr10 7090498 7090546 -138498742 + L1MA4 LINE L1 5902 5951 -349 2357 97 7 0 chr10 7090546 7090844 -138498444 + AluSx SINE Alu 2 301 -11 427 164 33 90 chr10 7090844 7090917 -138498371 + L1MA4 LINE L1 5951 6016 -284 1546 86 99 5 chr10 7091150 7091372 -138497916 - MER75B DNA T2_type 0 243 1 534 272 52 26 chr10 7091828 7092019 -138497269 + MIR SINE MIR 67 262 0 1653 128 83 4 chr10 7092618 7092883 -138496405 + AluJb SINE Alu 3 288 -24 321 118 0 0 chr10 7092958 7093009 -138496279 + (TTCC)n Simple_repeat Simple_repeat 2 52 0 4336 88 14 0 chr10 7093020 7093576 -138495712 - L1PA10 LINE L1 -4 6164 5601 280 188 0 0 chr10 7093723 7093771 -138495517 - MER75 DNA T2_type -4 510 463 821 215 48 72 chr10 7095128 7095175 -138494113 + Tigger7 DNA MER2_type 64 111 -622 2441 79 0 0 chr10 7095175 7095479 -138493809 - AluY SINE Alu -7 304 1 821 215 48 72 chr10 7095479 7095640 -138493648 + Tigger7 DNA MER2_type 111 267 -466 487 209 0 0 chr10 7095637 7095728 -138493560 + Tigger7 DNA MER2_type 2392 2482 -9 * 228 67 0 0 chr10 7097301 7097331 -138491957 + (T)n Simple_repeat Simple_repeat 1 30 0 1441 126 5 5 chr10 7097364 7097570 -138491718 + AluJb SINE Alu 85 290 -22 975 85 0 48 chr10 7097574 7097763 -138491525 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1752 150 0 0 chr10 7098028 7098301 -138490987 + AluJo SINE Alu 30 302 -10 1659 182 14 27 chr10 7098691 7098988 -138490300 + AluJb SINE Alu 1 293 -19 420 349 25 28 chr10 7099603 7099887 -138489401 - L1ME3A LINE L1 -221 5949 5667 364 261 35 43 chr10 7099912 7100027 -138489261 - MER5B DNA MER1_type -5 173 60 197 293 168 24 chr10 7100116 7100283 -138489005 - L2 LINE L2 -208 3064 2874 1615 205 25 47 chr10 7100286 7100372 -138488916 - Zaphod DNA AcHobo -4 4027 3941 1563 197 10 7 chr10 7100372 7100662 -138488626 + AluJo SINE Alu 1 291 -21 1615 205 25 47 chr10 7100662 7101018 -138488270 - Zaphod DNA AcHobo -90 3941 3595 864 206 71 90 chr10 7101016 7101091 -138488197 - Zaphod DNA AcHobo -3041 990 915 * 5513 32 34 2 chr10 7101091 7101717 -138487571 + SVA Other Other 741 1386 0 864 206 71 90 chr10 7101717 7101999 -138487289 - Zaphod DNA AcHobo -3116 915 642 2472 187 36 46 chr10 7101999 7102395 -138486893 - MER74A LTR ERVL -2 556 166 2092 125 3 34 chr10 7102395 7102715 -138486573 + AluSg SINE Alu 1 310 0 2472 187 36 46 chr10 7102715 7102880 -138486408 - MER74A LTR ERVL -392 166 1 864 206 71 90 chr10 7102880 7102987 -138486301 - Zaphod DNA AcHobo -3389 642 534 2010 292 82 38 chr10 7103005 7104059 -138485229 + Charlie8 DNA MER1_type 166 1265 -1152 1379 247 117 93 chr10 7104123 7105149 -138484139 + Charlie8 DNA MER1_type 1367 2417 0 282 254 85 25 chr10 7105232 7105350 -138483938 - L2 LINE L2 -2 3311 3187 309 292 124 0 chr10 7106648 7106761 -138482527 + HAL1 LINE L1 4 130 -2377 243 0 0 0 chr10 7106999 7107026 -138482262 + (T)n Simple_repeat Simple_repeat 1 27 0 1787 180 42 9 chr10 7107026 7107359 -138481929 - L1MC1 LINE L1 -13 6320 5977 1979 66 4 0 chr10 7109582 7109823 -138479465 + L1PA5 LINE L1 5913 6154 0 560 267 134 31 chr10 7110377 7110786 -138478502 + MLT1H1 LTR MaLR 1 473 -117 226 324 14 0 chr10 7110836 7110907 -138478381 + L3 LINE CR1 1307 1378 -199 1685 190 10 3 chr10 7110948 7111258 -138478030 + AluJo SINE Alu 1 312 0 251 338 105 0 chr10 7111276 7111409 -138477879 + MIR SINE MIR 56 202 -60 625 250 215 12 chr10 7111795 7112135 -138477153 + LTR16A LTR ERVL 21 429 -21 469 159 45 0 chr10 7112567 7112655 -138476633 + MER112 DNA MER1_type 138 229 -31 358 309 176 0 chr10 7112780 7112945 -138476343 + MER112 DNA MER1_type 26 219 -41 4236 87 16 12 chr10 7113660 7114512 -138474776 + L1PA8 LINE L1 4767 5614 -517 1843 82 115 4 chr10 7114512 7114772 -138474516 + L1PA8 LINE L1 5874 6172 0 378 254 49 35 chr10 7117611 7117753 -138471535 - L2 LINE L2 -19 3294 3151 217 324 27 27 chr10 7117843 7117991 -138471297 - L2 LINE L2 -126 3187 3040 7955 105 12 24 chr10 7118000 7119150 -138470138 + HSMAR1 DNA Mariner 1 1136 -151 8845 103 10 22 chr10 7119250 7120503 -138468785 + HSMAR1 DNA Mariner 46 1282 -5 2077 281 63 23 chr10 7120506 7121060 -138468228 - L2 LINE L2 -286 3027 2332 1775 181 66 15 chr10 7121060 7121095 -138468193 - MLT2D LTR ERVL -2 412 380 333 0 0 0 chr10 7121095 7121132 -138468156 + (TG)n Simple_repeat Simple_repeat 2 38 0 1775 181 66 15 chr10 7121132 7121488 -138467800 - MLT2D LTR ERVL -34 380 1 2077 281 63 23 chr10 7121488 7121789 -138467499 - L2 LINE L2 -981 2332 2044 916 225 90 5 chr10 7122435 7122635 -138466653 - MER58A DNA MER1_type -6 218 2 29 0 0 0 chr10 7123621 7123650 -138465638 + AT_rich Low_complexity Low_complexity 1 29 0 426 249 109 15 chr10 7124078 7124240 -138465048 - MIR SINE MIR -51 211 32 403 307 107 19 chr10 7124855 7125060 -138464228 - MIR SINE MIR -5 257 35 282 73 0 0 chr10 7125915 7125956 -138463332 + (CA)n Simple_repeat Simple_repeat 1 41 0 741 244 25 6 chr10 7126012 7126172 -138463116 + MER63A DNA MER1_type 48 210 0 361 299 0 30 chr10 7126769 7126901 -138462387 + MIR SINE MIR 32 158 -82 658 328 20 4 chr10 7126912 7127156 -138462132 - MIR SINE MIR -13 249 2 269 350 43 17 chr10 7127715 7127832 -138461456 + MIR SINE MIR 25 144 -64 2995 259 37 37 chr10 7129069 7130249 -138459039 + L1MA9 LINE L1 42 1220 -5886 2486 160 3 0 chr10 7130249 7130612 -138458676 - THE1B LTR MaLR 0 364 1 2995 259 37 37 chr10 7130612 7131353 -138457935 + L1MA9 LINE L1 1220 1959 -5147 228 67 0 0 chr10 7131353 7131383 -138457905 + (TA)n Simple_repeat Simple_repeat 1 30 0 2995 259 37 37 chr10 7131383 7131399 -138457889 + L1MA9 LINE L1 1959 1973 -5133 2170 112 0 0 chr10 7131399 7131684 -138457604 - AluSg SINE Alu -25 285 1 2995 259 37 37 chr10 7131684 7132373 -138456915 + L1MA9 LINE L1 1973 2660 -4446 2261 114 16 0 chr10 7132373 7132681 -138456607 + AluSp SINE Alu 1 313 0 2995 259 37 37 chr10 7132681 7133556 -138455732 + L1MA9 LINE L1 2660 4135 -2971 4853 164 53 46 chr10 7133643 7134438 -138454850 + L1MA9 LINE L1 5280 6068 -1204 2411 193 39 0 chr10 7134438 7134848 -138454440 + MSTB LTR MaLR 1 426 0 4853 164 53 46 chr10 7134848 7135042 -138454246 + L1MA9 LINE L1 6068 6259 -1013 1657 109 91 69 chr10 7135042 7135352 -138453936 + AluSg SINE Alu 1 316 0 4853 164 53 46 chr10 7135352 7136134 -138453154 + L1MA9 LINE L1 6259 7063 -209 2763 136 11 33 chr10 7136136 7136459 -138452829 + L1PB3 LINE L1 5708 6020 -134 2149 119 10 3 chr10 7136459 7136769 -138452519 + AluSx SINE Alu 1 312 0 2763 136 11 33 chr10 7136769 7136900 -138452388 + L1PB3 LINE L1 6020 6152 -2 1203 154 23 14 chr10 7136919 7137133 -138452155 + L1MA9 LINE L1 7057 7272 0 763 311 10 0 chr10 7137413 7137619 -138451669 - MIR SINE MIR -32 230 23 357 281 189 0 chr10 7138754 7138918 -138450370 + MER112 DNA MER1_type 60 254 -6 2062 151 138 26 chr10 7139051 7139436 -138449852 - MSTA LTR MaLR 0 428 1 2381 126 27 33 chr10 7140165 7140531 -138448757 + THE1B LTR MaLR 1 364 0 2305 114 37 45 chr10 7141016 7141394 -138447894 - THE1C LTR MaLR 0 375 1 356 262 69 54 chr10 7141811 7141996 -138447292 + MIR SINE MIR 15 204 -4 1879 144 33 13 chr10 7142229 7142534 -138446754 + AluSx SINE Alu 1 311 -1 4456 183 11 0 chr10 7142618 7143407 -138445881 + L1MB3 LINE L1 5379 6176 -7 197 292 226 15 chr10 7144108 7144303 -138444985 - MIR SINE MIR -6 256 21 372 265 22 55 chr10 7144387 7144568 -138444720 - Charlie7 DNA MER1_type 0 2612 2438 227 286 9 29 chr10 7144544 7144649 -138444639 - Charlie7 DNA MER1_type -2502 110 8 * 2071 132 63 11 chr10 7145600 7145948 -138443340 - THE1C LTR MaLR 0 375 10 2088 254 48 36 chr10 7146633 7147465 -138441823 + L1ME3A LINE L1 5127 5973 -197 502 265 29 0 chr10 7147480 7147616 -138441672 + L1ME3A LINE L1 5913 6052 -118 441 259 52 35 chr10 7147640 7147814 -138441474 + L1ME3A LINE L1 5989 6165 -5 4772 27 2 0 chr10 7147934 7148460 -138440828 + L1PA5 LINE L1 5625 6151 -3 1765 178 27 40 chr10 7149771 7150141 -138439147 + MLT1A1 LTR MaLR 1 365 0 398 306 97 8 chr10 7150213 7150347 -138438941 - L2 LINE L2 0 3272 3127 814 319 25 0 chr10 7150437 7150675 -138438613 - MIR SINE MIR -6 256 13 204 352 0 0 chr10 7150694 7150782 -138438506 - L2 LINE L2 -193 3079 2992 466 302 83 0 chr10 7151597 7151766 -138437522 + MIR SINE MIR 28 210 -52 1129 253 68 7 chr10 7152085 7152381 -138436907 - MLT1C LTR MaLR 0 467 154 2399 173 24 18 chr10 7152390 7152847 -138436441 + MER66B LTR ERV1 27 486 0 693 134 104 0 chr10 7152847 7152981 -138436307 - MLT1C LTR MaLR -314 153 6 420 256 0 0 chr10 7153864 7154036 -138435252 + (TG)n Simple_repeat Simple_repeat 1 172 0 204 143 0 0 chr10 7154080 7154122 -138435166 + (TG)n Simple_repeat Simple_repeat 1 42 0 21 0 0 0 chr10 7154335 7154356 -138434932 + AT_rich Low_complexity Low_complexity 1 21 0 579 328 40 12 chr10 7154356 7154609 -138434679 + MIR SINE MIR 3 262 0 353 271 0 10 chr10 7154966 7155062 -138434226 + L2 LINE L2 3197 3291 -22 392 285 26 20 chr10 7155102 7155253 -138434035 - MIR SINE MIR -23 239 88 238 225 42 0 chr10 7155400 7155471 -138433817 + GA-rich Low_complexity Low_complexity 1 74 0 2287 133 38 12 chr10 7158181 7158527 -138430761 - THE1A LTR MaLR 0 355 1 2897 175 68 26 chr10 7159109 7159393 -138429895 - MER7C DNA MER2_type -2426 602 331 1876 117 9 74 chr10 7159393 7159535 -138429753 + AluJb SINE Alu 3 153 -159 2289 101 0 3 chr10 7159535 7159831 -138429457 + AluY SINE Alu 1 295 -16 1876 117 9 74 chr10 7159831 7160014 -138429274 + AluJb SINE Alu 153 307 -5 2897 175 68 26 chr10 7160014 7160307 -138428981 - MER7C DNA MER2_type -2697 331 1 2315 125 47 36 chr10 7160554 7160914 -138428374 + THE1B LTR MaLR 1 364 0 425 207 11 11 chr10 7161744 7161831 -138427457 + MER5B DNA MER1_type 5 91 -87 1098 268 96 28 chr10 7161932 7162174 -138427114 + MLT1C LTR MaLR 1 225 -242 2294 202 24 77 chr10 7162174 7162759 -138426529 - MLT2B3 LTR ERVL 0 554 1 1098 268 96 28 chr10 7162759 7162953 -138426335 + MLT1C LTR MaLR 225 467 0 226 250 215 0 chr10 7163510 7163654 -138425634 + MER112 DNA MER1_type 60 234 -26 383 211 53 44 chr10 7163676 7163790 -138425498 + L1MC5 LINE L1 7609 7723 -238 340 225 75 75 chr10 7164281 7164468 -138424820 + L1MC5 LINE L1 7717 7903 -58 180 337 112 53 chr10 7164727 7164896 -138424392 + L2 LINE L2 3088 3266 -6 2055 103 0 4 chr10 7164973 7165236 -138424052 + AluSp SINE Alu 34 295 -18 611 296 47 39 chr10 7165325 7165558 -138423730 - MIR SINE MIR -10 252 18 182 286 100 0 chr10 7165703 7165773 -138423515 - MIR SINE MIR -7 255 179 3590 174 0 17 chr10 7166413 7166474 -138422814 + L1MB3 LINE L1 5553 5614 -569 1568 220 48 20 chr10 7166474 7166829 -138422459 + MLT1A1 LTR MaLR 1 365 0 3590 174 0 17 chr10 7166829 7167374 -138421914 + L1MB3 LINE L1 5614 6150 -33 1910 100 30 50 chr10 7167374 7167675 -138421613 + AluSq SINE Alu 1 295 -18 3590 174 0 17 chr10 7167675 7167706 -138421582 + L1MB3 LINE L1 6150 6180 -3 205 200 0 0 chr10 7167710 7167750 -138421538 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 1938 129 0 11 chr10 7168148 7168428 -138420860 - AluSx SINE Alu -6 306 30 505 155 0 0 chr10 7168429 7168500 -138420788 + AluS SINE Alu 16 86 -227 300 70 0 0 chr10 7168513 7168556 -138420732 + (TTA)n Simple_repeat Simple_repeat 3 45 0 38765 30 26 1 chr10 7168556 7173977 -138415311 - L1PA2 LINE L1 -18 6137 578 828 41 0 0 chr10 7173944 7174042 -138415246 - L1PA2 LINE L1 -6048 98 1 * 221 277 78 64 chr10 7174113 7174254 -138415034 - MIR SINE MIR -72 190 48 1813 162 0 24 chr10 7175196 7175493 -138413795 + AluSx SINE Alu 1 290 -22 1923 71 0 4 chr10 7175501 7175740 -138413548 + AluY SINE Alu 46 283 -28 381 22 0 0 chr10 7175748 7175794 -138413494 + (TAAAA)n Simple_repeat Simple_repeat 5 50 0 967 110 26 39 chr10 7176040 7176157 -138413131 - Charlie3 DNA MER1_type 0 2702 2586 2135 121 0 7 chr10 7176157 7176454 -138412834 - AluSq SINE Alu -16 297 3 967 110 26 39 chr10 7176454 7176491 -138412797 - Charlie3 DNA MER1_type -116 2586 2550 343 43 0 0 chr10 7176502 7176549 -138412739 + Charlie3 DNA MER1_type 2533 2579 -131 * 2430 117 32 36 chr10 7176515 7176926 -138412362 - MER1A DNA MER1_type -120 409 1 1650 46 0 46 chr10 7176943 7177160 -138412128 + AluY SINE Alu 105 311 0 1883 172 0 16 chr10 7177941 7178255 -138411033 - AluJb SINE Alu -3 309 1 1212 134 0 0 chr10 7178608 7178787 -138410501 - AluYa5 SINE Alu 0 311 133 3058 179 39 7 chr10 7178791 7179181 -138410107 - L1MB2 LINE L1 0 6171 5756 2471 77 0 3 chr10 7179181 7179491 -138409797 - AluY SINE Alu -2 309 1 3058 179 39 7 chr10 7179491 7179670 -138409618 - L1MB2 LINE L1 -415 5756 5584 1456 257 118 47 chr10 7179946 7180864 -138408424 - L2 LINE L2 0 3313 2333 202 128 26 0 chr10 7181516 7181555 -138407733 + A-rich Low_complexity Low_complexity 2 41 0 587 327 98 42 chr10 7182294 7182481 -138406807 + L1MEc LINE L1 57 232 -6164 312 91 0 0 chr10 7182481 7182525 -138406763 + (CA)n Simple_repeat Simple_repeat 1 44 0 587 327 98 42 chr10 7182525 7183176 -138406112 + L1MEc LINE L1 232 942 -5454 * 2018 236 87 23 chr10 7183147 7184123 -138405165 + L1ME2 LINE L1 5183 6226 -7 352 22 0 0 chr10 7184770 7184816 -138404472 + MADE1 DNA Mariner 1 46 -34 321 300 44 19 chr10 7185295 7185455 -138403833 + HAL1 LINE L1 390 553 -1954 309 311 68 87 chr10 7185619 7185780 -138403508 + HAL1 LINE L1 1762 1919 -588 618 294 60 33 chr10 7185897 7186316 -138402972 + HAL1 LINE L1 1993 2422 -85 757 258 151 25 chr10 7186329 7186760 -138402528 + LTR16C LTR ERVL 6 490 -1 233 310 59 91 chr10 7188392 7188579 -138400709 + L3 LINE CR1 405 585 -992 348 285 77 68 chr10 7188619 7188826 -138400462 + MIR SINE MIR 43 251 -11 2530 60 0 13 chr10 7189080 7189395 -138399893 - AluY SINE Alu 0 311 1 1741 199 21 8 chr10 7189400 7189781 -138399507 - L1MB2 LINE L1 -2 6169 5784 1280 150 23 35 chr10 7189789 7190049 -138399239 + L1 LINE L1 3640 3896 -2250 1705 175 99 19 chr10 7190604 7191027 -138398261 + LTR48 LTR ERV1 331 787 0 35 54 0 0 chr10 7191176 7191232 -138398056 + AT_rich Low_complexity Low_complexity 1 56 0 1193 150 84 14 chr10 7191772 7191985 -138397303 + MER30 DNA MER1_type 1 228 -2 1947 129 13 30 chr10 7192221 7192524 -138396764 + AluSq SINE Alu 5 302 -11 2266 82 0 24 chr10 7192893 7193186 -138396102 + AluSc SINE Alu 1 286 -23 327 340 49 0 chr10 7194310 7194454 -138394834 + L1M4 LINE L1 2470 2620 -3526 296 311 47 16 chr10 7194522 7194779 -138394509 + L1M4 LINE L1 2681 2945 -3201 412 267 51 70 chr10 7195292 7195565 -138393723 + MER113 DNA MER1_type? 94 361 -160 215 200 50 33 chr10 7196334 7196394 -138392894 + MIR SINE MIR 120 180 -82 201 174 0 87 chr10 7196829 7196898 -138392390 + (TCTCTG)n Simple_repeat Simple_repeat 6 68 0 237 291 24 12 chr10 7196976 7197141 -138392147 + (TG)n Simple_repeat Simple_repeat 2 168 0 312 27 0 0 chr10 7197176 7197213 -138392075 + (TG)n Simple_repeat Simple_repeat 1 37 0 1905 111 7 32 chr10 7197339 7197618 -138391670 - AluSq SINE Alu -41 272 1 821 129 7 21 chr10 7197622 7197762 -138391526 + MER50 LTR ERV1 574 711 -23 609 218 60 32 chr10 7197861 7198144 -138391144 - LTR29 LTR ERV1 -89 529 221 2260 123 0 13 chr10 7198303 7198619 -138390669 + AluSx SINE Alu 1 312 0 312 238 27 96 chr10 7198648 7198745 -138390543 - L1M4 LINE L1 -778 5368 5266 1808 176 3 3 chr10 7198745 7199034 -138390254 + AluJo SINE Alu 2 290 -22 312 238 27 96 chr10 7199034 7199171 -138390117 - L1M4 LINE L1 -880 5266 5151 1328 255 88 76 chr10 7199171 7199473 -138389815 + MLT1E1 LTR MaLR 1 298 -356 1966 131 0 30 chr10 7199473 7199796 -138389492 - AluSx SINE Alu 0 312 1 1328 255 88 76 chr10 7199796 7200139 -138389149 + MLT1E1 LTR MaLR 298 654 0 312 238 27 96 chr10 7200139 7200164 -138389124 - L1M4 LINE L1 -995 5151 5126 2431 112 0 0 chr10 7200208 7200521 -138388767 + AluSq SINE Alu 1 313 0 231 241 241 9 chr10 7201028 7201144 -138388144 + MIR3 SINE MIR 66 208 0 538 194 123 32 chr10 7201599 7201754 -138387534 - MER21B LTR ERV1 -57 806 638 230 250 10 0 chr10 7201872 7201885 -138387403 + (TA)n Simple_repeat Simple_repeat 2 13 -85 1332 81 0 6 chr10 7201885 7202059 -138387229 + L1PA8 LINE L1 5991 6163 -9 230 250 10 0 chr10 7202059 7202141 -138387147 + (TA)n Simple_repeat Simple_repeat 13 98 0 804 148 42 5 chr10 7202283 7203095 -138386193 - L1MC1 LINE L1 0 6333 5188 1905 154 0 37 chr10 7203100 7203424 -138385864 - AluJb SINE Alu 0 312 1 1527 203 135 0 chr10 7203486 7203835 -138385453 - MSTD LTR MaLR 0 396 1 2406 167 55 7 chr10 7204625 7205061 -138384227 - LTR32 LTR ERVL 0 471 15 1681 94 106 196 chr10 7205119 7205589 -138383699 - MSTA LTR MaLR 0 428 1 413 213 66 115 chr10 7205638 7205821 -138383467 + MER5A DNA MER1_type 2 175 -14 810 200 7 0 chr10 7205822 7205967 -138383321 + MER5A DNA MER1_type 14 159 -30 216 0 0 0 chr10 7206358 7206382 -138382906 + (GA)n Simple_repeat Simple_repeat 2 25 0 529 333 94 19 chr10 7206854 7207217 -138382071 + L3 LINE CR1 487 876 -701 198 294 249 34 chr10 7207231 7207321 -138381967 + L3 LINE CR1 1020 1089 -488 2076 100 0 31 chr10 7207321 7207611 -138381677 + AluSx SINE Alu 18 298 -14 198 294 249 34 chr10 7207611 7207697 -138381591 + L3 LINE CR1 1089 1234 -343 438 274 137 0 chr10 7208312 7208509 -138380779 - L1MC/D LINE L1 -1997 5811 5588 2361 94 10 0 chr10 7208511 7208818 -138380470 - AluSx SINE Alu -2 310 1 1826 134 54 0 chr10 7209735 7210012 -138379276 + AluSx SINE Alu 1 292 -20 2443 107 0 0 chr10 7210015 7210325 -138378963 + AluSx SINE Alu 1 310 -2 1099 134 128 0 chr10 7210344 7210531 -138378757 + AluJo SINE Alu 84 294 -18 699 207 124 6 chr10 7210604 7210773 -138378515 + MER5A DNA MER1_type 1 189 0 193 338 119 0 chr10 7212013 7212173 -138377115 + MIR SINE MIR 31 209 -53 209 303 91 30 chr10 7212582 7212681 -138376607 - MIR3 SINE MIR -43 165 61 271 243 61 52 chr10 7212970 7213115 -138376173 - MIR SINE MIR -54 208 62 476 171 0 11 chr10 7213963 7214051 -138375237 + MIR3 SINE MIR 101 187 -21 612 255 133 49 chr10 7214341 7214825 -138374463 - L2 LINE L2 -31 3282 2759 273 284 154 38 chr10 7215011 7215170 -138374118 + MIR SINE MIR 35 206 -56 1936 163 0 22 chr10 7215755 7216074 -138373214 + AluJb SINE Alu 1 312 0 205 167 19 56 chr10 7216810 7216864 -138372424 + MER91B DNA MER1_type 4 55 -135 310 273 187 7 chr10 7218157 7218296 -138370992 - MER5A DNA MER1_type 0 189 26 372 94 0 0 chr10 7218508 7218561 -138370727 + (TG)n Simple_repeat Simple_repeat 1 53 0 194 161 0 0 chr10 7219571 7219602 -138369686 + MIR SINE MIR 67 97 -165 1004 224 5 14 chr10 7219724 7219934 -138369354 - MIR SINE MIR -34 228 21 271 306 90 9 chr10 7220107 7220218 -138369070 + MIR SINE MIR 28 147 -115 243 230 35 92 chr10 7221391 7221478 -138367810 + MIR SINE MIR 79 160 -102 355 259 123 65 chr10 7221945 7222115 -138367173 - MIR3 SINE MIR -19 189 10 207 245 20 0 chr10 7222890 7222939 -138366349 - MIR3 SINE MIR -8 200 151 516 286 239 19 chr10 7223000 7224022 -138365266 - L2 LINE L2 0 3313 2008 446 310 65 0 chr10 7224136 7224291 -138364997 - MIR SINE MIR -97 165 1 1662 180 80 50 chr10 7224997 7225374 -138363914 - MLT1B LTR MaLR -2 388 1 7379 33 0 0 chr10 7226769 7227810 -138361478 - L1P2 LINE L1 -638 5517 4476 190 259 0 52 chr10 7227855 7227913 -138361375 - L2 LINE L2 -18 3254 3200 274 243 243 37 chr10 7227935 7228071 -138361217 + MIR3 SINE MIR 12 175 -33 1230 67 11 6 chr10 7228514 7228693 -138360595 + (TTC)n Simple_repeat Simple_repeat 1 180 0 1695 185 0 51 chr10 7228696 7229010 -138360278 - AluJb SINE Alu -14 298 1 4732 120 12 15 chr10 7229280 7229631 -138359657 + HSMAR2 DNA Mariner 2 352 -950 1750 121 0 0 chr10 7229631 7229862 -138359426 + AluSg/x SINE Alu 76 306 -4 4732 120 12 15 chr10 7229862 7230722 -138358566 + HSMAR2 DNA Mariner 352 1300 -2 378 362 46 9 chr10 7231589 7231807 -138357481 + MIR SINE MIR 22 247 -15 2319 86 7 10 chr10 7232429 7232730 -138356558 - AluSq SINE Alu -13 300 1 188 270 230 14 chr10 7232829 7232903 -138356385 - MIR SINE MIR -113 149 60 2344 120 0 0 chr10 7233408 7233707 -138355581 - AluSx SINE Alu -13 299 1 940 117 0 0 chr10 7234271 7234391 -138354897 - AluSq/x SINE Alu -193 120 1 341 283 80 43 chr10 7234442 7234580 -138354708 - L1M4 LINE L1 -1260 4886 4744 192 207 259 0 chr10 7234727 7234785 -138354503 - MIR SINE MIR -90 172 100 2319 119 0 0 chr10 7235366 7235678 -138353610 + AluSx SINE Alu 1 312 0 287 307 0 62 chr10 7236291 7236483 -138352805 + CT-rich Low_complexity Low_complexity 1 180 0 355 183 39 13 chr10 7236651 7236804 -138352484 + CT-rich Low_complexity Low_complexity 2 158 0 233 211 56 11 chr10 7237210 7237300 -138351988 - L1ME3 LINE L1 -91 6071 5978 1565 197 0 36 chr10 7238892 7239201 -138350087 + AluJb SINE Alu 1 298 -14 979 69 15 0 chr10 7240354 7240485 -138348803 + L1MA3 LINE L1 6173 6305 0 2001 131 10 17 chr10 7240641 7240939 -138348349 - AluSx SINE Alu -16 296 1 339 25 0 0 chr10 7240941 7240981 -138348307 + (TTA)n Simple_repeat Simple_repeat 2 41 0 1818 103 9 125 chr10 7240981 7241302 -138347986 - AluSx SINE Alu -18 284 1 2794 150 2 28 chr10 7241443 7241584 -138347704 + L1PB3 LINE L1 5694 5837 -317 2365 73 0 45 chr10 7241584 7241897 -138347391 - AluY SINE Alu -11 300 2 2794 150 2 28 chr10 7241897 7242221 -138347067 + L1PB3 LINE L1 5837 6147 -7 204 97 0 0 chr10 7242708 7242739 -138346549 + (A)n Simple_repeat Simple_repeat 1 31 0 1747 176 3 14 chr10 7242740 7243035 -138346253 - AluJo SINE Alu -9 303 12 435 280 140 29 chr10 7243879 7244086 -138345202 + MIR SINE MIR 20 249 -13 2458 87 0 0 chr10 7244373 7244671 -138344617 - AluSx SINE Alu -14 298 1 263 103 0 0 chr10 7245239 7245278 -138344010 + L1MA9 LINE L1 6274 6312 0 26 50 0 0 chr10 7245342 7245382 -138343906 + AT_rich Low_complexity Low_complexity 1 40 0 330 282 122 20 chr10 7245715 7245960 -138343328 - L2 LINE L2 -358 2956 2687 * 621 294 50 5 chr10 7245957 7246178 -138343110 + L2 LINE L2 1879 2109 -1205 191 318 11 34 chr10 7246971 7247059 -138342229 + MIR SINE MIR 103 188 -74 192 77 0 0 chr10 7248052 7248078 -138341210 + (GAA)n Simple_repeat Simple_repeat 2 27 0 907 185 38 12 chr10 7248308 7248542 -138340746 - L1MA6 LINE L1 -6 6294 6034 1066 151 5 21 chr10 7249117 7249309 -138339979 - MER5A DNA MER1_type 0 189 1 1088 164 31 62 chr10 7249498 7249724 -138339564 + MER20 DNA MER1_type 1 219 0 207 0 0 0 chr10 7250612 7250635 -138338653 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 999 209 70 42 chr10 7250807 7251162 -138338126 - L1MC5 LINE L1 -265 7696 7332 2259 78 0 11 chr10 7251184 7251503 -138337785 - AluY SINE Alu 0 316 1 2275 104 0 41 chr10 7251503 7251820 -138337468 - AluSx SINE Alu -8 304 1 1665 202 0 22 chr10 7252643 7252838 -138336450 - AluJo SINE Alu -2 310 123 315 0 0 0 chr10 7252838 7252873 -138336415 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1665 202 0 22 chr10 7252873 7252994 -138336294 - AluJo SINE Alu -189 123 1 316 312 88 2 chr10 7253078 7253215 -138336073 - MIR3 SINE MIR -52 156 9 196 278 93 86 chr10 7253749 7253815 -138335473 - L3 LINE CR1 -352 1225 1161 2096 154 0 0 chr10 7253815 7254114 -138335174 + AluJb SINE Alu 1 299 -13 196 278 93 86 chr10 7254114 7254198 -138335090 - L3 LINE CR1 -416 1161 1074 579 228 15 95 chr10 7254304 7254567 -138334721 - L1MC5 LINE L1 -48 7913 7672 211 287 138 21 chr10 7254815 7254909 -138334379 + MIR SINE MIR 30 134 -74 2619 40 0 3 chr10 7255134 7255434 -138333854 - AluY SINE Alu -12 299 1 189 380 58 16 chr10 7255475 7255717 -138333571 + L2 LINE L2 938 1189 -2125 225 125 0 0 chr10 7255886 7255918 -138333370 + MER63 DNA MER1_type 701 732 -328 864 108 7 50 chr10 7255922 7256061 -138333227 - FLAM_C SINE Alu 0 143 11 251 237 0 0 chr10 7256088 7256147 -138333141 + MER63 DNA MER1_type 968 1026 -35 347 302 128 54 chr10 7256287 7256731 -138332557 + L2 LINE L2 1563 2039 -1275 845 88 35 0 chr10 7256898 7257012 -138332276 - AluY SINE Alu -193 118 1 318 295 269 0 chr10 7257122 7257278 -138332010 + MIR SINE MIR 65 262 0 1807 145 13 30 chr10 7257500 7257804 -138331484 + AluSq SINE Alu 1 299 -14 37268 73 7 6 chr10 7258134 7263735 -138325553 + L1P2 LINE L1 175 5779 -375 1167 49 7 14 chr10 7263735 7263877 -138325411 + AluY SINE Alu 5 145 -166 691 197 48 21 chr10 7264025 7264213 -138325075 + LTR41 LTR ERVL 1 193 -580 378 237 128 83 chr10 7264471 7264725 -138324563 + LTR41 LTR ERVL 510 795 0 425 347 12 12 chr10 7265022 7265189 -138324099 - MIR SINE MIR -93 169 3 * 442 302 116 39 chr10 7265189 7265416 -138323872 - MIR SINE MIR -16 246 2 224 26 0 79 chr10 7265623 7265661 -138323627 + (CCCTAA)n Simple_repeat Simple_repeat 6 40 0 659 96 19 0 chr10 7266778 7266882 -138322406 + (GAAA)n Simple_repeat Simple_repeat 1 106 0 238 250 0 0 chr10 7267868 7267920 -138321368 - MER81 DNA DNA 0 114 63 2192 136 72 37 chr10 7267920 7268348 -138320940 - MSTB2 LTR MaLR 0 457 15 407 147 0 0 chr10 7268349 7268417 -138320871 - MER81 DNA DNA -45 69 2 225 108 0 0 chr10 7318812 7318849 -138270439 + (CA)n Simple_repeat Simple_repeat 2 38 0 181 273 0 0 chr10 7319591 7319635 -138269653 - L2 LINE L2 -20 3293 3250 689 141 0 0 chr10 7319976 7320075 -138269213 + AluJb SINE Alu 24 122 -190 1779 141 6 69 chr10 7320082 7320402 -138268886 - AluSq SINE Alu -13 300 1 1255 132 10 10 chr10 7320402 7320599 -138268689 - MSTB LTR MaLR -229 197 1 216 0 0 0 chr10 7321058 7321082 -138268206 + (A)n Simple_repeat Simple_repeat 1 24 0 1416 116 37 0 chr10 7321412 7321627 -138267661 + L1PA11 LINE L1 5950 6172 -2 2463 142 55 0 chr10 7322408 7322810 -138266478 + MSTB1 LTR MaLR 9 432 0 4069 177 49 27 chr10 7323344 7324302 -138264986 + L1MB7 LINE L1 5197 6168 -16 1841 110 59 0 chr10 7324310 7324564 -138264724 + AluSx SINE Alu 1 269 -43 2262 98 0 14 chr10 7324763 7325059 -138264229 - AluY SINE Alu -19 292 1 569 277 51 38 chr10 7325215 7325507 -138263781 + L1MCc LINE L1 24 319 -6104 304 109 0 0 chr10 7325871 7325917 -138263371 + AluSx SINE Alu 252 297 -4 227 299 15 15 chr10 7327497 7327564 -138261724 + MIR3 SINE MIR 118 184 -24 378 212 18 0 chr10 7328031 7328196 -138261092 + (CA)n Simple_repeat Simple_repeat 2 169 0 268 211 8 8 chr10 7328210 7328333 -138260955 + (CA)n Simple_repeat Simple_repeat 1 123 0 242 226 24 0 chr10 7328403 7328571 -138260717 + (CA)n Simple_repeat Simple_repeat 2 173 0 2067 119 4 0 chr10 7329132 7329433 -138259855 + AluSx SINE Alu 5 306 0 21 0 0 0 chr10 7329826 7329847 -138259441 + AT_rich Low_complexity Low_complexity 1 21 0 255 180 180 82 chr10 7329923 7330045 -138259243 - L1ME LINE L1 -490 5631 5498 2081 119 7 7 chr10 7330460 7330755 -138258533 + AluSx SINE Alu 5 299 -13 192 40 0 0 chr10 7330910 7330935 -138258353 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 2147 104 3 3 chr10 7330944 7331232 -138258056 - AluSx SINE Alu -24 288 1 342 275 53 47 chr10 7332128 7332299 -138256989 + L3 LINE CR1 1227 1398 -179 470 263 67 52 chr10 7332339 7332368 -138256920 - MLT1J2 LTR MaLR -14 436 409 2472 98 30 11 chr10 7332368 7332736 -138256552 - THE1C LTR MaLR 0 375 1 470 263 67 52 chr10 7332736 7332900 -138256388 - MLT1J2 LTR MaLR -41 409 240 217 154 0 0 chr10 7333337 7333376 -138255912 + L3 LINE CR1 1524 1562 -15 972 149 23 0 chr10 7333807 7333981 -138255307 - L1P LINE L1 -801 5345 5168 25 51 0 0 chr10 7335357 7335396 -138253892 + AT_rich Low_complexity Low_complexity 1 39 0 300 215 52 7 chr10 7335432 7335567 -138253721 + (TA)n Simple_repeat Simple_repeat 1 141 0 1474 225 57 15 chr10 7336363 7336735 -138252553 + MLT2D LTR ERVL 1 480 -40 322 266 78 42 chr10 7336776 7336914 -138252374 + L1MC4a LINE L1 5684 5832 -1976 2058 168 31 20 chr10 7336914 7337272 -138252016 + THE1B LTR MaLR 1 362 -2 322 266 78 42 chr10 7337272 7337325 -138251963 + L1MC4a LINE L1 5832 5882 -1926 2004 105 0 4 chr10 7337766 7338042 -138251246 + L1PB2 LINE L1 5829 6103 -48 1690 175 0 20 chr10 7338043 7338335 -138250953 + AluJo SINE Alu 1 286 -26 384 132 0 0 chr10 7338358 7338426 -138250862 + L1PB3 LINE L1 6086 6153 -1 687 192 66 12 chr10 7338492 7338659 -138250629 + Cheshire DNA MER1_type 1589 1764 -656 2010 173 14 6 chr10 7338810 7339157 -138250131 - MLT1A1 LTR MaLR -13 352 3 1865 114 110 0 chr10 7339595 7339876 -138249412 + AluSx SINE Alu 1 312 0 2095 146 55 22 chr10 7340947 7341310 -138247978 + THE1C LTR MaLR 1 375 0 615 198 72 24 chr10 7341874 7342041 -138247247 + MLT1B LTR MaLR 1 175 -215 2199 101 3 3 chr10 7342046 7342332 -138246956 + AluSg SINE Alu 1 286 -24 468 356 20 7 chr10 7342465 7342788 -138246500 + AluSq SINE Alu 5 331 0 1052 173 47 135 chr10 7342801 7343119 -138246169 + MLT1C LTR MaLR 178 467 0 234 302 91 65 chr10 7343571 7343968 -138245320 + L2 LINE L2 2833 3239 -33 228 163 0 0 chr10 7344235 7344278 -138245010 + (TGAA)n Simple_repeat Simple_repeat 3 45 0 386 288 49 43 chr10 7344333 7344496 -138244792 + MIR3 SINE MIR 30 193 -15 1221 180 0 14 chr10 7345067 7345278 -138244010 + AluJo SINE Alu 5 212 -100 688 201 107 44 chr10 7345283 7345442 -138243846 + AluJo SINE Alu 109 277 -35 180 0 0 0 chr10 7345450 7345470 -138243818 + (T)n Simple_repeat Simple_repeat 1 20 0 803 183 20 20 chr10 7345843 7345996 -138243292 + FRAM SINE Alu 10 162 -14 337 311 24 36 chr10 7346014 7346181 -138243107 + MIR SINE MIR 53 217 -45 407 302 16 16 chr10 7347556 7347682 -138241606 + MIR SINE MIR 112 237 -25 2494 83 0 3 chr10 7347811 7348124 -138241164 - AluSp SINE Alu -1 312 1 537 295 93 51 chr10 7349895 7349921 -138239367 + MIR SINE MIR 2 25 -237 2192 76 29 0 chr10 7349921 7350231 -138239057 - AluSg SINE Alu 0 318 1 537 295 93 51 chr10 7350231 7350439 -138238849 + MIR SINE MIR 25 248 -14 243 317 30 20 chr10 7350818 7350919 -138238369 - MIR SINE MIR -64 198 97 2049 95 0 130 chr10 7350959 7351306 -138237982 + AluSx SINE Alu 1 302 0 441 307 50 20 chr10 7351381 7351583 -138237705 - MLT1I LTR MaLR -2 407 200 436 337 137 49 chr10 7351677 7352101 -138237187 - L2 LINE L2 -89 3183 2733 210 336 67 8 chr10 7353637 7353756 -138235532 - MIR SINE MIR -123 139 14 * 255 303 17 59 chr10 7353686 7353805 -138235483 + MIR SINE MIR 39 152 -110 206 290 29 0 chr10 7355103 7355172 -138234116 + MIR3 SINE MIR 105 175 -33 187 383 32 11 chr10 7355312 7355406 -138233882 - MIR3 SINE MIR -105 103 8 236 143 24 95 chr10 7355417 7355501 -138233787 - Charlie7 DNA MER1_type -36 2576 2499 2493 239 103 22 chr10 7355573 7356514 -138232774 - Charlie7 DNA MER1_type -94 2518 1479 287 261 185 60 chr10 7356532 7356716 -138232572 - Charlie7 DNA MER1_type -2272 340 134 791 172 16 0 chr10 7356732 7356860 -138232428 + AluJo SINE Alu 5 134 -178 13395 127 92 5 chr10 7356864 7356910 -138232378 - L1PBa LINE L1 -3175 3687 3646 1972 141 13 16 chr10 7356910 7357222 -138232066 - AluSx SINE Alu -1 311 1 13395 127 92 5 chr10 7357222 7359984 -138229304 - L1PBa LINE L1 -3216 3646 634 960 191 21 0 chr10 7359984 7360178 -138229110 - L1PBa LINE L1 -6663 200 3 1952 70 0 0 chr10 7360191 7360434 -138228854 - L1P4 LINE L1 -469 5692 5450 366 301 103 14 chr10 7362147 7362293 -138226995 - MIR3 SINE MIR -10 198 40 196 279 51 25 chr10 7362878 7362957 -138226331 - L3b LINE CR1 -249 1334 1254 1888 183 16 35 chr10 7363046 7363418 -138225870 + MLT1A1 LTR MaLR 1 365 0 244 365 77 48 chr10 7363424 7363734 -138225554 - L2 LINE L2 -15 3257 2939 3009 80 0 0 chr10 7364206 7364579 -138224709 - L1PA13 LINE L1 -2 6161 5789 318 40 0 100 chr10 7364586 7364636 -138224652 - L1PA8A LINE L1 -314 5817 5773 468 105 0 0 chr10 7365117 7365193 -138224095 + (TC)n Simple_repeat Simple_repeat 1 76 0 645 10 0 134 chr10 7366615 7366712 -138222576 + L1PA2 LINE L1 15 98 -6048 * 38273 32 24 1 chr10 7366710 7372118 -138217170 + L1PA2 LINE L1 623 6155 0 2015 144 0 0 chr10 7372893 7373192 -138216096 - AluSx SINE Alu -13 299 1 199 331 41 50 chr10 7373993 7374114 -138215174 + L2 LINE L2 3153 3272 0 2252 121 0 0 chr10 7375685 7375991 -138213297 - AluSx SINE Alu -6 306 1 625 264 19 0 chr10 7376023 7376182 -138213106 + MIR SINE MIR 50 211 -51 183 265 0 20 chr10 7376682 7376731 -138212557 + L2 LINE L2 2988 3035 -237 309 206 41 0 chr10 7377766 7377839 -138211449 + MER103 DNA DNA 2 77 -89 2690 40 0 0 chr10 7378229 7378530 -138210758 + AluY SINE Alu 1 301 -10 2032 121 28 0 chr10 7378576 7378865 -138210423 + AluSx SINE Alu 1 297 -15 242 71 0 24 chr10 7379223 7379265 -138210023 + (ATG)n Simple_repeat Simple_repeat 3 43 0 1587 206 0 3 chr10 7379289 7379576 -138209712 - AluJo SINE Alu -26 286 1 424 217 43 2 chr10 7379628 7379804 -138209484 + LTR16A1 LTR ERVL 246 457 0 2156 99 34 0 chr10 7380141 7380433 -138208855 - AluSg SINE Alu -8 302 1 339 297 78 31 chr10 7380738 7380866 -138208422 - L2 LINE L2 0 3272 3139 531 251 149 14 chr10 7381395 7381610 -138207678 + MIR SINE MIR 13 256 -6 478 266 12 73 chr10 7381584 7381832 -138207456 - L2 LINE L2 0 3313 3081 * 185 244 24 0 chr10 7381886 7381927 -138207361 + MIR SINE MIR 218 259 -3 251 329 0 0 chr10 7382793 7382869 -138206419 + MIR SINE MIR 79 154 -108 375 23 0 0 chr10 7383125 7383169 -138206119 + (TG)n Simple_repeat Simple_repeat 2 45 0 387 264 0 21 chr10 7383169 7383279 -138206009 + L1ME3A LINE L1 5760 5866 -298 754 257 105 34 chr10 7383823 7384298 -138204990 + L1M4 LINE L1 4390 4898 -1248 1356 159 42 85 chr10 7384492 7384775 -138204513 - AluJo SINE Alu -35 277 7 256 303 211 13 chr10 7385800 7385952 -138203336 - MIR SINE MIR -61 201 20 886 164 26 0 chr10 7386797 7386949 -138202339 + FRAM SINE Alu 1 155 -21 328 185 62 0 chr10 7387034 7387099 -138202189 + AluJ/FRAM SINE Alu 232 300 -2 201 365 111 8 chr10 7391528 7391654 -138197634 - MIR3 SINE MIR -53 155 17 2104 114 0 3 chr10 7391981 7392280 -138197008 + AluSx SINE Alu 1 298 -14 243 0 0 0 chr10 7392285 7392312 -138196976 + (CAAA)n Simple_repeat Simple_repeat 3 29 0 1671 166 17 7 chr10 7393266 7393568 -138195720 + AluJo SINE Alu 1 305 -7 347 73 18 0 chr10 7393908 7393963 -138195325 + (CA)n Simple_repeat Simple_repeat 2 57 0 186 43 0 0 chr10 7395227 7395250 -138194038 + (TTCTG)n Simple_repeat Simple_repeat 5 27 0 278 375 19 0 chr10 7395353 7395457 -138193831 - MIR SINE MIR -64 144 39 401 223 40 68 chr10 7395630 7395778 -138193510 - L2 LINE L2 0 3313 3170 1377 71 0 0 chr10 7397064 7397234 -138192054 + AluSq SINE Alu 126 295 -18 2047 133 0 9 chr10 7398104 7398419 -138190869 - AluSx SINE Alu 0 312 1 1829 250 54 32 chr10 7399171 7399820 -138189468 + L1MDa LINE L1 11 673 -5867 333 294 49 11 chr10 7399833 7400017 -138189271 + L1MDa LINE L1 725 915 -5625 630 242 60 64 chr10 7402025 7402350 -138186938 + MLT1B LTR MaLR 40 384 -6 258 304 43 35 chr10 7403048 7403163 -138186125 + MIR3 SINE MIR 81 196 -12 212 0 36 0 chr10 7404096 7404124 -138185164 + (TG)n Simple_repeat Simple_repeat 2 30 0 1387 213 41 46 chr10 7406573 7406740 -138182548 + MLT1B LTR MaLR 4 170 -220 1339 202 26 10 chr10 7406740 7407042 -138182246 + AluJo SINE Alu 5 311 -1 1387 213 41 46 chr10 7407042 7407263 -138182025 + MLT1B LTR MaLR 170 390 0 252 59 0 0 chr10 7408545 7408579 -138180709 + (A)n Simple_repeat Simple_repeat 1 34 0 591 258 150 41 chr10 7409187 7409277 -138180011 + LTR16A LTR ERVL 16 95 -355 1853 126 0 54 chr10 7409277 7409594 -138179694 - AluSx SINE Alu -12 300 1 591 258 150 41 chr10 7409594 7409844 -138179444 + LTR16A LTR ERVL 95 393 -57 362 239 23 0 chr10 7410001 7410089 -138179199 + L1MC4 LINE L1 6498 6587 -1455 294 167 19 0 chr10 7410111 7410165 -138179123 + MER68 LTR ERV1 5 59 -503 1766 106 0 4 chr10 7410166 7410412 -138178876 + AluSc SINE Alu 53 297 -12 548 158 24 4 chr10 7410415 7410582 -138178706 + MER46A DNA MER2_type 1 236 0 274 212 30 0 chr10 7410582 7410648 -138178640 + L1MC4 LINE L1 7842 7909 -133 1929 125 30 0 chr10 7411198 7411493 -138177795 - AluSq SINE Alu -9 304 1 3556 26 2 0 chr10 7411617 7412032 -138177256 + L1PA4 LINE L1 5737 6152 -3 2124 141 33 33 chr10 7413344 7413707 -138175581 + THE1B LTR MaLR 1 363 -1 428 171 0 11 chr10 7415543 7415631 -138173657 + (CATA)n Simple_repeat Simple_repeat 2 88 0 841 152 15 0 chr10 7415633 7415765 -138173523 - AluJo SINE Alu -177 135 2 449 259 42 36 chr10 7419950 7419961 -138169327 + L2 LINE L2 1728 1737 -1577 2253 122 39 28 chr10 7419961 7420321 -138168967 + THE1B LTR MaLR 1 364 0 449 259 42 36 chr10 7420321 7420475 -138168813 + L2 LINE L2 1737 1894 -1420 528 311 82 37 chr10 7420540 7420967 -138168321 + L2 LINE L2 2634 3305 -8 195 337 141 0 chr10 7425743 7425835 -138163453 + L2 LINE L2 3209 3313 0 671 337 36 36 chr10 7427336 7427802 -138161486 - L1ME3A LINE L1 -290 5880 5415 1225 96 0 0 chr10 7427923 7428080 -138161208 + AluSx SINE Alu 9 165 -147 277 167 0 0 chr10 7428082 7428130 -138161158 + AluSp/q SINE Alu 250 297 -6 1969 155 0 0 chr10 7428131 7428435 -138160853 - AluSx SINE Alu -8 304 1 960 194 22 0 chr10 7430354 7430534 -138158754 + MER5A DNA MER1_type 2 185 -4 321 268 107 18 chr10 7431131 7431243 -138158045 - MIR SINE MIR -66 142 21 1997 117 0 20 chr10 7432873 7433172 -138156116 - AluSx SINE Alu -19 293 1 2025 92 4 0 chr10 7433770 7434043 -138155245 + AluSq SINE Alu 24 297 -16 1266 180 22 73 chr10 7434229 7434546 -138154742 - AluJb SINE Alu -11 301 1 198 0 0 0 chr10 7435199 7435221 -138154067 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 1462 192 7 2 chr10 7436099 7436543 -138152745 + AluJo SINE Alu 1 218 -94 1089 216 13 4 chr10 7436316 7436543 -138152745 + AluJb SINE Alu 84 436 -46 660 115 25 8 chr10 7436543 7436665 -138152623 + GA-rich Low_complexity Low_complexity 1 124 0 1089 216 13 4 chr10 7436665 7436713 -138152575 + AluJb SINE Alu 436 482 0 2116 92 0 4 chr10 7437596 7437867 -138151421 + AluSq SINE Alu 39 308 -5 259 91 0 0 chr10 7438461 7438494 -138150794 + U2 snRNA snRNA 1 33 -155 776 243 75 25 chr10 7438619 7438899 -138150389 + L1MC4a LINE L1 5736 6029 -1779 195 69 0 0 chr10 7439961 7439990 -138149298 + (CAAAAA)n Simple_repeat Simple_repeat 3 31 0 510 221 131 14 chr10 7440145 7440290 -138148998 - MIR SINE MIR -72 190 29 3823 53 2 0 chr10 7441959 7442408 -138146880 + L1PA8 LINE L1 5717 6166 -6 1896 138 17 17 chr10 7444295 7444592 -138144696 + AluJb SINE Alu 1 297 -15 312 289 115 19 chr10 7445191 7445347 -138143941 - MIR SINE MIR -67 195 25 2294 148 11 0 chr10 7445393 7445744 -138143544 + THE1A LTR MaLR 1 355 0 1289 192 40 14 chr10 7446259 7446535 -138142753 + L1MB3 LINE L1 5899 6181 -2 332 250 26 0 chr10 7449881 7449957 -138139331 + L2 LINE L2 3234 3311 -2 2026 96 0 0 chr10 7450000 7450260 -138139028 - AluY SINE Alu -9 302 43 207 127 48 0 chr10 7450378 7450441 -138138847 + (TA)n Simple_repeat Simple_repeat 1 66 0 23 78 0 0 chr10 7450709 7450760 -138138528 + AT_rich Low_complexity Low_complexity 1 51 0 85 47 0 0 chr10 7450840 7450967 -138138321 + AT_rich Low_complexity Low_complexity 1 127 0 443 100 0 0 chr10 7451075 7451135 -138138153 + Alu SINE Alu 244 303 -8 232 233 29 29 chr10 7451195 7451298 -138137990 + T-rich Low_complexity Low_complexity 2 104 0 532 231 41 81 chr10 7451318 7451539 -138137749 - L1ME1 LINE L1 -20 6080 5869 935 234 65 27 chr10 7451621 7451882 -138137406 - L1ME1 LINE L1 -231 5869 5599 1136 200 5 0 chr10 7451884 7452089 -138137199 - MLT1B LTR MaLR 0 390 185 1932 123 49 7 chr10 7452219 7452503 -138136785 - AluSg SINE Alu -14 296 1 1121 146 0 0 chr10 7452507 7452678 -138136610 - MLT1B LTR MaLR -219 171 1 1451 231 33 3 chr10 7452695 7452998 -138136290 - L1ME1 LINE L1 -529 5571 5260 691 219 120 9 chr10 7453037 7453289 -138135999 - L1ME1 LINE L1 -5035 1045 772 752 233 33 11 chr10 7453293 7453473 -138135815 - MER5A DNA MER1_type -5 184 1 1999 256 40 75 chr10 7453487 7454269 -138135019 - L1ME1 LINE L1 -5307 763 10 27 0 0 0 chr10 7454269 7454296 -138134992 + AT_rich Low_complexity Low_complexity 1 27 0 607 271 21 0 chr10 7455660 7455804 -138133484 + L1ME LINE L1 351 497 -5573 733 199 283 22 chr10 7456272 7456548 -138132740 + MER7A DNA MER2_type 1 346 0 26 0 0 0 chr10 7457912 7457938 -138131350 + AT_rich Low_complexity Low_complexity 1 26 0 773 146 7 0 chr10 7458220 7458357 -138130931 + CT-rich Low_complexity Low_complexity 2 139 0 874 47 9 0 chr10 7458846 7458953 -138130335 + AluSg1 SINE Alu 1 108 -201 2178 121 7 0 chr10 7459112 7459417 -138129871 - AluSg SINE Alu -3 307 1 23 0 0 0 chr10 7459418 7459441 -138129847 + AT_rich Low_complexity Low_complexity 1 23 0 279 276 25 107 chr10 7459910 7460053 -138129235 + MIR3 SINE MIR 21 145 -63 2055 129 3 13 chr10 7460053 7460364 -138128924 + AluSg SINE Alu 3 310 0 279 276 25 107 chr10 7460364 7460416 -138128872 + MIR3 SINE MIR 145 200 -8 407 285 166 51 chr10 7461649 7462179 -138127109 + L1ME4a LINE L1 5526 6116 -5 264 368 22 22 chr10 7462523 7462705 -138126583 + L1ME LINE L1 5420 5601 -520 316 321 219 33 chr10 7464102 7464526 -138124762 + L1MEd LINE L1 64 566 -5553 376 259 17 52 chr10 7464531 7464647 -138124641 - L2 LINE L2 -3 3310 3199 589 272 173 33 chr10 7465126 7465844 -138123444 - L2 LINE L2 0 3313 2456 203 147 0 0 chr10 7467023 7467057 -138122231 + (CCA)n Simple_repeat Simple_repeat 2 35 0 288 311 11 11 chr10 7467445 7467535 -138121753 + MIR3 SINE MIR 98 187 -21 1096 281 121 43 chr10 7467561 7468281 -138121007 - L1MC4a LINE L1 -1640 6168 5393 2600 108 8 22 chr10 7468441 7468810 -138120478 + THE1B LTR MaLR 1 364 0 29 0 0 0 chr10 7469109 7469138 -138120150 + AT_rich Low_complexity Low_complexity 1 29 0 280 252 2 63 chr10 7469873 7469972 -138119316 + MIR SINE MIR 41 133 -75 188 304 82 52 chr10 7471917 7472052 -138117236 + L2 LINE L2 3133 3271 -1 363 231 45 52 chr10 7472659 7472793 -138116495 + L2 LINE L2 3094 3226 -87 358 297 27 9 chr10 7473083 7473194 -138116094 - MIR3 SINE MIR -82 126 14 21 57 0 0 chr10 7473482 7473517 -138115771 + AT_rich Low_complexity Low_complexity 1 35 0 2379 98 0 0 chr10 7473950 7474255 -138115033 + AluSg SINE Alu 1 305 -5 2288 122 0 0 chr10 7474616 7474928 -138114360 - AluSx SINE Alu 0 312 1 941 141 0 0 chr10 7475390 7475525 -138113763 - AluJo SINE Alu -177 135 1 4421 140 64 1 chr10 7477626 7478326 -138110962 - L1PA16 LINE L1 0 6166 5423 788 150 41 0 chr10 7478526 7478673 -138110615 + L1MA4 LINE L1 6145 6297 -3 2057 130 0 0 chr10 7478705 7478990 -138110298 + AluSg SINE Alu 1 285 -25 2591 235 81 33 chr10 7480264 7481031 -138108257 + MER21B LTR ERV1 9 812 -51 2292 78 0 27 chr10 7482051 7482346 -138106942 + AluSc SINE Alu 1 287 -22 907 186 136 0 chr10 7483321 7483520 -138105768 + MER46A DNA MER2_type 11 236 0 408 280 32 24 chr10 7483629 7483754 -138105534 - MIR SINE MIR -132 130 5 1682 119 4 0 chr10 7484381 7484605 -138104683 + AluSx SINE Alu 60 287 -25 303 28 0 0 chr10 7484605 7484641 -138104647 + (GGGGA)n Simple_repeat Simple_repeat 5 40 0 1682 119 4 0 chr10 7484641 7484660 -138104628 + AluSx SINE Alu 287 304 -8 1791 168 14 3 chr10 7485457 7485749 -138103539 - AluJb SINE Alu -17 295 1 772 196 61 37 chr10 7486934 7487148 -138102140 - MER20 DNA MER1_type 0 219 1 642 288 106 30 chr10 7487774 7488181 -138101107 - MLT1L LTR MaLR -32 583 146 2114 105 3 7 chr10 7490745 7491058 -138098230 - AluSx SINE Alu 0 312 1 189 107 0 0 chr10 7492444 7492472 -138096816 + (A)n Simple_repeat Simple_repeat 1 28 0 363 44 0 0 chr10 7492651 7492696 -138096592 + (TCCC)n Simple_repeat Simple_repeat 1 45 0 326 105 0 18 chr10 7492838 7492895 -138096393 + (TCCC)n Simple_repeat Simple_repeat 1 56 0 2020 125 3 0 chr10 7492895 7493182 -138096106 - AluSx SINE Alu -24 288 1 405 278 99 68 chr10 7493493 7493764 -138095524 - L2 LINE L2 -7 3306 3045 2459 94 0 0 chr10 7493764 7494071 -138095217 - AluSx SINE Alu -5 307 1 405 278 99 68 chr10 7494071 7494539 -138094749 - L2 LINE L2 -268 3045 2488 1899 203 104 38 chr10 7494539 7495066 -138094222 + MER68 LTR ERV1 1 562 0 405 278 99 68 chr10 7495066 7495120 -138094168 - L2 LINE L2 -825 2488 2437 718 153 0 0 chr10 7495125 7495236 -138094052 - AluSx SINE Alu -8 304 194 816 85 0 9 chr10 7495237 7495343 -138093945 - AluSx SINE Alu -172 141 37 2427 88 0 0 chr10 7496197 7496492 -138092796 - AluSx SINE Alu -17 295 1 447 19 0 0 chr10 7497389 7497441 -138091847 + (TG)n Simple_repeat Simple_repeat 2 53 0 21 0 0 0 chr10 7497509 7497530 -138091758 + AT_rich Low_complexity Low_complexity 1 21 0 965 255 109 26 chr10 7497677 7498100 -138091188 + MLT1C LTR MaLR 6 463 -4 2103 117 7 26 chr10 7498684 7498993 -138090295 + AluSx SINE Alu 1 303 -9 248 286 133 0 chr10 7499034 7499132 -138090156 - L2 LINE L2 -3 3310 3200 2297 114 57 20 chr10 7499336 7499687 -138089601 - THE1B LTR MaLR 0 364 1 443 308 115 40 chr10 7499875 7500248 -138089040 + HAL1 LINE L1 8 408 -2099 424 188 51 68 chr10 7500292 7500409 -138088879 + HAL1 LINE L1 580 694 -1813 2198 101 0 10 chr10 7500485 7500773 -138088515 - AluSx SINE Alu -23 289 5 316 258 22 0 chr10 7500788 7500877 -138088411 + HAL1 LINE L1 1556 1646 -861 2274 73 23 7 chr10 7501159 7501461 -138087827 - L1PA5 LINE L1 -6 6148 5842 2702 48 0 0 chr10 7501464 7501780 -138087508 + L1PA5 LINE L1 5496 5811 -343 794 161 8 0 chr10 7501886 7502016 -138087272 + AluJo SINE Alu 1 131 -171 2338 114 56 8 chr10 7502029 7502387 -138086901 + THE1C LTR MaLR 1 375 0 943 199 0 0 chr10 7502390 7502551 -138086737 + AluJo SINE Alu 137 297 -5 274 284 0 14 chr10 7503142 7503216 -138086072 + GA-rich Low_complexity Low_complexity 2 74 0 2125 130 3 0 chr10 7504215 7504507 -138084781 - AluSc SINE Alu -16 293 1 1528 104 75 90 chr10 7506515 7506794 -138082494 + AluSq SINE Alu 39 313 0 1532 196 91 6 chr10 7507623 7507964 -138081324 + MLT1A2 LTR MaLR 1 370 -4 1798 178 0 16 chr10 7508640 7508944 -138080344 + AluJb SINE Alu 1 299 -13 1340 172 17 4 chr10 7509526 7509764 -138079524 - AluJb SINE Alu -8 304 64 195 283 151 13 chr10 7510736 7510888 -138078400 + MIR SINE MIR 87 259 -3 524 200 8 0 chr10 7511083 7511208 -138078080 + (TGGA)n Simple_repeat Simple_repeat 3 128 0 185 0 40 0 chr10 7513658 7513683 -138075605 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 1637 177 55 6 chr10 7514146 7514473 -138074815 - MER2 DNA MER2_type -1 343 1 2677 33 7 0 chr10 7514759 7515060 -138074228 - AluY SINE Alu -8 303 1 1534 115 165 27 chr10 7516430 7516691 -138072597 + AluSg SINE Alu 1 297 -3 1795 149 30 33 chr10 7518235 7518536 -138070752 + AluJo SINE Alu 1 300 -12 237 326 74 0 chr10 7519747 7519842 -138069446 - HAL1 LINE L1 -2387 120 19 1784 108 115 0 chr10 7520420 7520680 -138068608 + AluSx SINE Alu 5 294 -18 939 88 64 0 chr10 7520761 7520886 -138068402 - AluSg/x SINE Alu -35 275 143 1478 113 0 0 chr10 7520886 7521080 -138068208 - AluSx SINE Alu -118 194 1 417 286 97 7 chr10 7521099 7521253 -138068035 - L2 LINE L2 -784 2530 2363 375 78 0 0 chr10 7521373 7521424 -138067864 + (TC)n Simple_repeat Simple_repeat 1 51 0 407 217 0 0 chr10 7522151 7522234 -138067054 - L2 LINE L2 -1297 2017 1935 1419 194 44 106 chr10 7524341 7524775 -138064513 + MLT2D LTR ERVL 1 407 -7 387 312 34 29 chr10 7524977 7525182 -138064106 + MIR SINE MIR 43 248 -14 207 114 0 0 chr10 7525221 7525256 -138064032 + (GGA)n Simple_repeat Simple_repeat 1 35 0 705 230 0 0 chr10 7526309 7526487 -138062801 + (TG)n Simple_repeat Simple_repeat 1 178 0 1017 121 0 7 chr10 7526610 7526750 -138062538 + AluSq/x SINE Alu 1 139 -173 305 155 0 17 chr10 7526750 7526797 -138062491 + L1P LINE L1 2667 2714 -3432 5950 65 5 100 chr10 7526797 7527998 -138061290 + L1PA8A LINE L1 5021 6129 -2 198 352 28 9 chr10 7528335 7528443 -138060845 + L2 LINE L2 3163 3272 0 246 136 0 0 chr10 7531173 7531217 -138058071 + (GA)n Simple_repeat Simple_repeat 2 45 0 2467 121 8 8 chr10 7531787 7532151 -138057137 + THE1B LTR MaLR 1 364 0 1600 184 54 32 chr10 7533922 7534238 -138055050 + MER58B DNA MER1_type 19 341 0 229 317 0 20 chr10 7534382 7534483 -138054805 + A-rich Low_complexity Low_complexity 2 100 0 1108 288 69 37 chr10 7534762 7535608 -138053680 + L1M4 LINE L1 4373 5245 -901 1246 224 16 32 chr10 7535754 7536067 -138053221 + AluJo SINE Alu 1 308 -4 279 256 44 11 chr10 7536589 7536679 -138052609 + L1M LINE L1 5318 5410 -754 1047 217 7 8 chr10 7536679 7536924 -138052364 + MLT2B1 LTR ERVL 3 241 -173 293 235 188 0 chr10 7537116 7537201 -138052087 + MLT1J2 LTR MaLR 189 289 -161 900 233 33 14 chr10 7537602 7537817 -138051471 - MER20 DNA MER1_type 0 219 1 2263 85 7 4 chr10 7538445 7538775 -138050513 + AluSq SINE Alu 1 331 0 2075 53 0 8 chr10 7539658 7539920 -138049368 + L1PA5 LINE L1 5892 6151 -3 265 163 62 0 chr10 7540838 7540918 -138048370 + (TATAA)n Simple_repeat Simple_repeat 2 86 0 1404 179 39 0 chr10 7541056 7541290 -138047998 - AluJb SINE Alu -69 243 1 216 0 0 0 chr10 7541307 7541331 -138047957 + (TTTTTG)n Simple_repeat Simple_repeat 1 24 0 801 138 8 8 chr10 7541334 7541464 -138047824 - FLAM_C SINE Alu -3 130 1 1986 132 0 0 chr10 7542307 7542580 -138046708 + AluSx SINE Alu 1 273 -39 180 152 0 0 chr10 7542581 7542614 -138046674 + GA-rich Low_complexity Low_complexity 2 34 0 1103 84 17 11 chr10 7542614 7542793 -138046495 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1383 202 70 89 chr10 7542850 7543380 -138045908 + MLT2B1 LTR ERVL 1 520 0 506 261 141 0 chr10 7543418 7543602 -138045686 + MIR SINE MIR 53 262 0 197 139 23 0 chr10 7544556 7544599 -138044689 + (CA)n Simple_repeat Simple_repeat 1 44 0 2209 101 10 0 chr10 7545043 7545340 -138043948 + AluSp SINE Alu 1 300 -13 627 195 27 34 chr10 7545920 7546069 -138043219 - MER106B DNA MER1_type -4 1055 908 238 217 0 22 chr10 7546087 7546133 -138043155 - MER106B DNA MER1_type -1014 45 1 531 332 53 4 chr10 7546529 7546755 -138042533 - L2 LINE L2 -265 3048 2812 274 139 21 35 chr10 7547323 7547467 -138041821 + HERV17 LTR ERV1 708 849 -7777 741 163 0 0 chr10 7547469 7547723 -138041565 + GA-rich Low_complexity Low_complexity 1 254 0 333 145 0 0 chr10 7547726 7547802 -138041486 + (GA)n Simple_repeat Simple_repeat 2 77 0 2555 60 0 0 chr10 7548883 7549181 -138040107 - AluY SINE Alu -12 299 2 233 216 0 54 chr10 7549581 7549655 -138039633 + L1M4 LINE L1 4577 4646 -1500 2289 135 16 16 chr10 7549723 7550087 -138039201 + THE1B LTR MaLR 1 364 0 258 32 0 0 chr10 7550288 7550319 -138038969 + (CA)n Simple_repeat Simple_repeat 2 32 0 2187 116 13 10 chr10 7550853 7551164 -138038124 + AluSx SINE Alu 1 312 0 207 69 0 0 chr10 7551564 7551593 -138037695 + (CAGAGA)n Simple_repeat Simple_repeat 2 30 0 1110 171 64 138 chr10 7552312 7552643 -138036645 - MLT1B LTR MaLR 0 390 95 2501 73 0 0 chr10 7552643 7552945 -138036343 - AluSx SINE Alu -6 306 5 1110 171 64 138 chr10 7552945 7553033 -138036255 - MLT1B LTR MaLR -295 95 2 424 267 61 28 chr10 7553213 7553393 -138035895 - MER20B DNA MER1_type -83 700 515 941 127 40 0 chr10 7553439 7553612 -138035676 + L1MB8 LINE L1 5998 6177 -1 982 289 102 11 chr10 7553691 7554131 -138035157 - MER20B DNA MER1_type -268 515 36 3010 198 84 30 chr10 7554893 7555101 -138034187 - L1ME1 LINE L1 -1 6165 5970 2157 114 0 0 chr10 7555101 7555381 -138033907 + AluSx SINE Alu 22 301 -11 3010 198 84 30 chr10 7555381 7556351 -138032937 - L1ME1 LINE L1 -196 5970 4922 180 111 0 0 chr10 7556912 7556939 -138032349 + (ATG)n Simple_repeat Simple_repeat 1 27 0 540 269 44 0 chr10 7557204 7557364 -138031924 - MLT1G LTR MaLR 0 590 424 * 965 275 50 17 chr10 7557362 7557660 -138031628 - MLT1G LTR MaLR -271 319 12 251 157 12 36 chr10 7558322 7558405 -138030883 + CT-rich Low_complexity Low_complexity 1 81 0 200 254 51 0 chr10 7559335 7559394 -138029894 - MIR3 SINE MIR -50 158 97 2044 105 0 40 chr10 7559419 7559723 -138029565 + AluSx SINE Alu 17 308 -4 2319 103 0 0 chr10 7560546 7560847 -138028441 - AluSx SINE Alu -11 301 1 243 250 0 0 chr10 7561005 7561053 -138028235 + L2 LINE L2 3219 3266 -6 1312 144 0 10 chr10 7561073 7561267 -138028021 - AluJo SINE Alu -14 298 107 570 137 11 0 chr10 7561267 7561362 -138027926 - THE1B LTR MaLR -1 363 268 236 342 7 20 chr10 7561363 7561515 -138027773 + CT-rich Low_complexity Low_complexity 3 152 0 839 259 47 0 chr10 7562766 7563002 -138026286 + L1MB3 LINE L1 5934 6180 -3 351 0 0 0 chr10 7563263 7563302 -138025986 + (CA)n Simple_repeat Simple_repeat 2 40 0 825 168 14 7 chr10 7564189 7564332 -138024956 + FRAM SINE Alu 1 144 -32 315 0 0 0 chr10 7564332 7564367 -138024921 + (CAAT)n Simple_repeat Simple_repeat 4 38 0 2322 131 80 10 chr10 7565018 7565416 -138023872 + MSTA LTR MaLR 1 426 -2 2225 154 17 51 chr10 7566004 7566419 -138022869 - Tigger2a DNA MER2_type -33 401 1 2168 110 3 0 chr10 7566638 7566956 -138022332 + AluSq SINE Alu 1 319 0 1654 130 14 11 chr10 7567808 7568084 -138021204 - Tigger2a DNA MER2_type -157 277 1 690 131 0 25 chr10 7568235 7568357 -138020931 + AluJb SINE Alu 185 303 -9 725 254 23 9 chr10 7569358 7569575 -138019713 + L1MC5 LINE L1 7706 7925 -36 2471 53 40 3 chr10 7570077 7570377 -138018911 - AluY SINE Alu 0 311 1 5196 120 8 10 chr10 7570626 7571408 -138017880 - L1PA15 LINE L1 -69 6096 5317 2304 132 25 6 chr10 7571923 7572280 -138017008 + THE1B LTR MaLR 1 364 0 2281 71 40 17 chr10 7572365 7572661 -138016627 + AluYa5 SINE Alu 1 303 -8 2281 116 0 0 chr10 7573036 7573337 -138015951 - AluSg SINE Alu -9 301 1 255 229 125 0 chr10 7573927 7574023 -138015265 - HAL1 LINE L1 -1036 1471 1364 1961 103 0 66 chr10 7574368 7574709 -138014579 + AluSx SINE Alu 1 321 0 249 219 42 135 chr10 7574727 7574919 -138014369 + MLT1J LTR MaLR 1 174 -337 2318 99 0 28 chr10 7577117 7577439 -138011849 - AluSq SINE Alu 0 313 1 439 267 35 47 chr10 7579073 7579245 -138010043 - MIR SINE MIR -40 222 53 27 0 0 0 chr10 7579550 7579577 -138009711 + AT_rich Low_complexity Low_complexity 1 27 0 1411 132 15 0 chr10 7580017 7580214 -138009074 - AluJo SINE Alu -26 286 87 2276 89 4 0 chr10 7580410 7580724 -138008564 + AluY SINE Alu 1 315 0 795 214 199 47 chr10 7581240 7581484 -138007804 - Charlie2 DNA MER1_type -3 2859 2653 2340 98 0 13 chr10 7581484 7581800 -138007488 + AluSx SINE Alu 1 312 0 795 214 199 47 chr10 7581800 7582068 -138007220 - Charlie2 DNA MER1_type -209 2653 2269 312 271 88 39 chr10 7582145 7582326 -138006962 - Charlie2 DNA MER1_type -2651 211 22 1387 203 75 11 chr10 7582362 7582737 -138006551 - Zaphod DNA AcHobo -37 3994 3596 1399 230 167 97 chr10 7582738 7583225 -138006063 - Zaphod DNA AcHobo -3043 988 537 1880 134 0 7 chr10 7583225 7583516 -138005772 + AluSg1 SINE Alu 15 303 0 1399 230 167 97 chr10 7583516 7583949 -138005339 - Zaphod DNA AcHobo -3494 537 2 2048 109 11 18 chr10 7584073 7584398 -138004890 - AluSx SINE Alu 0 323 1 1399 206 23 99 chr10 7584905 7585347 -138003941 + MLT2D LTR ERVL 7 414 0 223 288 41 0 chr10 7587666 7587739 -138001549 + MIR SINE MIR 121 196 -66 1853 166 7 3 chr10 7587866 7588167 -138001121 + AluJb SINE Alu 1 302 -10 36 53 0 0 chr10 7588627 7588684 -138000604 + AT_rich Low_complexity Low_complexity 1 57 0 24 0 0 0 chr10 7588969 7588993 -138000295 + AT_rich Low_complexity Low_complexity 1 24 0 212 259 137 58 chr10 7590679 7590730 -137998558 - MIR3 SINE MIR -14 194 148 2501 77 16 56 chr10 7590730 7591035 -137998253 + THE1B LTR MaLR 1 290 -74 2352 76 3 0 chr10 7591035 7591326 -137997962 - AluSg SINE Alu -18 292 1 2501 77 16 56 chr10 7591326 7591398 -137997890 + THE1B LTR MaLR 290 363 -1 212 259 137 58 chr10 7591398 7591485 -137997803 - MIR3 SINE MIR -60 148 45 1843 186 60 35 chr10 7593234 7593665 -137995623 + L1MB7 LINE L1 5728 6169 -15 907 184 61 10 chr10 7594446 7594642 -137994646 - MER20B DNA MER1_type 0 219 14 268 93 0 0 chr10 7594750 7594793 -137994495 - L1PA2 LINE L1 0 6155 6113 236 217 0 66 chr10 7594962 7595068 -137994220 + CT-rich Low_complexity Low_complexity 1 99 0 948 201 56 42 chr10 7595705 7595993 -137993295 - MER33 DNA MER1_type -14 310 19 650 213 31 0 chr10 7596729 7596856 -137992432 + FLAM_A SINE Alu 3 133 0 1909 141 0 24 chr10 7597549 7597847 -137991441 - AluJb SINE Alu -21 291 1 2192 129 0 10 chr10 7598796 7599107 -137990181 - AluSx SINE Alu -4 308 1 2311 91 30 0 chr10 7599601 7599898 -137989390 - AluSx SINE Alu -6 306 1 1684 169 77 66 chr10 7600685 7601112 -137988176 + MSTB1 LTR MaLR 1 432 0 2015 147 7 0 chr10 7601662 7601968 -137987320 + AluSx SINE Alu 1 308 -4 450 0 0 0 chr10 7603432 7603482 -137985806 + (CA)n Simple_repeat Simple_repeat 1 50 0 2176 86 0 40 chr10 7604119 7604421 -137984867 + AluY SINE Alu 22 311 0 2451 75 3 3 chr10 7604570 7604876 -137984412 + AluSc SINE Alu 1 306 -3 3640 113 0 52 chr10 7604984 7605540 -137983748 - MER1A DNA MER1_type 0 527 1 898 161 58 7 chr10 7605779 7605934 -137983354 - Charlie3 DNA MER1_type -2547 163 1 714 211 0 0 chr10 7606188 7606368 -137982920 + (TA)n Simple_repeat Simple_repeat 1 180 0 2158 142 7 0 chr10 7608003 7608382 -137980906 + AluSx SINE Alu 1 381 0 282 270 110 20 chr10 7608389 7608489 -137980799 + MIR3 SINE MIR 48 156 -52 1385 77 48 62 chr10 7608792 7609000 -137980288 - AluSx SINE Alu -107 205 1 1244 214 0 8 chr10 7611415 7611672 -137977616 + L1PA16 LINE L1 5894 6148 -18 1218 182 0 10 chr10 7611799 7612008 -137977280 + AluJo SINE Alu 1 207 -105 6498 156 21 22 chr10 7612110 7612430 -137976858 - L1MC1 LINE L1 -20 6313 5994 2261 129 31 11 chr10 7612430 7612787 -137976501 + THE1B LTR MaLR 1 364 0 6498 156 21 22 chr10 7612787 7613134 -137976154 - L1MC1 LINE L1 -339 5994 5648 2082 118 227 2 chr10 7613134 7613531 -137975757 - LTR19A LTR ERV1 0 486 1 6498 156 21 22 chr10 7613531 7614279 -137975009 - L1MC1 LINE L1 -685 5648 4896 2049 72 8 8 chr10 7614811 7615073 -137974215 - Charlie3 DNA MER1_type -8 2702 2441 2351 114 0 6 chr10 7615180 7615495 -137973793 + AluSp SINE Alu 1 313 0 2136 96 6 19 chr10 7616972 7617285 -137972003 + AluSc SINE Alu 1 309 0 24 32 0 0 chr10 7617506 7617537 -137971751 + AT_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr10 7618776 7618800 -137970488 + AT_rich Low_complexity Low_complexity 1 24 0 198 294 0 29 chr10 7619647 7619715 -137969573 - L2 LINE L2 0 3272 3207 615 277 110 67 chr10 7619767 7620061 -137969227 + MLT1J LTR MaLR 1 322 -189 619 253 170 21 chr10 7620061 7620255 -137969033 + MER58A DNA MER1_type 1 223 -1 615 277 110 67 chr10 7620255 7620407 -137968881 + MLT1J LTR MaLR 322 466 -45 235 261 80 57 chr10 7621108 7621196 -137968092 + MLT1J LTR MaLR 110 199 -312 234 250 0 0 chr10 7621314 7621362 -137967926 + MLT1I LTR MaLR 346 393 -16 26 0 0 0 chr10 7621769 7621795 -137967493 + AT_rich Low_complexity Low_complexity 1 26 0 2110 108 0 56 chr10 7621889 7622213 -137967075 + AluSq SINE Alu 1 306 -7 2017 138 18 33 chr10 7622292 7622789 -137966499 - L1MB7 LINE L1 -175 6009 2806 2365 182 71 11 chr10 7623002 7623468 -137965820 + MLT1D LTR MaLR 12 505 0 550 302 104 0 chr10 7623533 7623755 -137965533 + MIR SINE MIR 12 256 -6 344 220 43 0 chr10 7624296 7624437 -137964851 + (TG)n Simple_repeat Simple_repeat 2 148 0 359 249 86 104 chr10 7624502 7624723 -137964565 + MIR SINE MIR 18 234 -28 1687 198 7 0 chr10 7626359 7626642 -137962646 + AluJb SINE Alu 1 285 -27 563 51 26 0 chr10 7626642 7626720 -137962568 + (CATA)n Simple_repeat Simple_repeat 4 83 0 235 261 80 57 chr10 7626948 7627036 -137962252 + MLT1J LTR MaLR 110 199 -312 234 250 0 0 chr10 7627154 7627202 -137962086 + MLT1I LTR MaLR 346 393 -16 2167 130 0 0 chr10 7627729 7628021 -137961267 + AluSx SINE Alu 1 292 -20 713 166 0 65 chr10 7628816 7628955 -137960333 + FLAM_A SINE Alu 1 130 -3 2491 97 0 0 chr10 7629530 7629840 -137959448 + AluSp SINE Alu 1 310 -3 2442 60 13 3 chr10 7631319 7631618 -137957670 + AluY SINE Alu 1 302 -9 1689 155 30 0 chr10 7631935 7632200 -137957088 + AluSx SINE Alu 1 273 -39 549 280 75 0 chr10 7632403 7632589 -137956699 - MIR SINE MIR -48 214 15 2069 107 7 58 chr10 7633254 7633564 -137955724 + AluSx SINE Alu 5 298 -14 499 262 35 79 chr10 7633689 7633918 -137955370 - L2 LINE L2 -3 3310 3092 405 0 0 0 chr10 7633928 7633973 -137955315 + (ATG)n Simple_repeat Simple_repeat 2 46 0 1024 150 6 12 chr10 7633973 7634140 -137955148 - AluSq SINE Alu -29 284 119 670 131 10 0 chr10 7634313 7634412 -137954876 - AluSq/x SINE Alu -208 104 5 201 245 113 0 chr10 7634432 7634485 -137954803 - L2 LINE L2 -245 3068 3010 251 300 64 18 chr10 7635423 7635533 -137953755 + MIR3 SINE MIR 81 195 -13 583 210 80 7 chr10 7635821 7635959 -137953329 + MER3 DNA MER1_type 38 185 -24 2111 119 0 0 chr10 7636558 7636836 -137952452 + AluSx SINE Alu 1 278 -34 207 69 0 0 chr10 7636838 7636867 -137952421 + (CAAT)n Simple_repeat Simple_repeat 4 32 0 2422 88 0 0 chr10 7636926 7637223 -137952065 + AluSg SINE Alu 1 297 -13 530 286 48 31 chr10 7637570 7637860 -137951428 - L1ME4a LINE L1 -237 5884 5590 2299 95 3 0 chr10 7637975 7638270 -137951018 + AluSx SINE Alu 3 298 -14 470 91 13 0 chr10 7638699 7638776 -137950512 + (TA)n Simple_repeat Simple_repeat 1 78 0 2163 112 7 3 chr10 7638777 7639071 -137950217 - AluSx SINE Alu -17 295 1 355 275 218 26 chr10 7639325 7639518 -137949770 + MLT1J LTR MaLR 1 230 -281 278 255 39 10 chr10 7639616 7639718 -137949570 + MLT1J LTR MaLR 400 504 -7 1416 110 106 9 chr10 7639742 7639969 -137949319 - AluJb SINE Alu -13 299 51 261 287 61 93 chr10 7639988 7640235 -137949053 - HAL1 LINE L1 -2 2505 2267 920 280 140 36 chr10 7640353 7640777 -137948511 - HAL1 LINE L1 -447 2060 1571 1378 147 151 8 chr10 7640777 7641036 -137948252 + AluSg1 SINE Alu 1 296 -13 920 280 140 36 chr10 7641036 7641132 -137948156 - HAL1 LINE L1 -936 1571 1486 836 216 180 41 chr10 7641149 7641566 -137947722 - HAL1 LINE L1 -1091 1416 942 435 283 72 32 chr10 7641582 7641693 -137947595 - HAL1 LINE L1 -1596 911 806 1871 109 6 45 chr10 7641693 7642004 -137947284 + AluSx SINE Alu 1 299 -13 435 283 72 32 chr10 7642004 7642143 -137947145 - HAL1 LINE L1 -1701 806 651 3059 40 0 21 chr10 7642429 7642807 -137946481 + L1PA5 LINE L1 5784 6153 -1 2345 74 3 13 chr10 7644961 7645272 -137944016 - AluSx SINE Alu -4 308 1 2266 102 0 0 chr10 7646591 7646895 -137942393 + AluSx SINE Alu 1 304 -8 1828 142 3 0 chr10 7649101 7649412 -137939876 + AluSx SINE Alu 1 312 0 371 273 163 17 chr10 7649482 7649654 -137939634 + MIR SINE MIR 48 244 -18 874 189 17 0 chr10 7649663 7649843 -137939445 + L1MA4 LINE L1 6111 6293 -7 21 0 0 0 chr10 7649857 7649878 -137939410 + AT_rich Low_complexity Low_complexity 1 21 0 314 283 76 62 chr10 7651447 7651592 -137937696 - MIR3 SINE MIR -49 159 13 202 200 0 0 chr10 7655781 7655816 -137933472 + (CA)n Simple_repeat Simple_repeat 2 36 0 200 206 0 0 chr10 7656463 7656497 -137932791 + T-rich Low_complexity Low_complexity 5 38 0 235 167 14 28 chr10 7656666 7656738 -137932550 + (CTCG)n Simple_repeat Simple_repeat 2 72 0 252 0 0 0 chr10 7656805 7656833 -137932455 + (T)n Simple_repeat Simple_repeat 1 28 0 204 125 0 0 chr10 7656840 7656872 -137932416 + (TG)n Simple_repeat Simple_repeat 1 32 0 528 264 49 0 chr10 7660601 7660745 -137928543 + MIR3 SINE MIR 28 178 -30 2124 111 0 29 chr10 7661294 7661609 -137927679 + AluSx SINE Alu 1 306 -6 1778 157 7 0 chr10 7662269 7662556 -137926732 + AluJo SINE Alu 3 291 -21 23 0 0 0 chr10 7663064 7663087 -137926201 + AT_rich Low_complexity Low_complexity 1 23 0 694 224 82 56 chr10 7663546 7663869 -137925419 - L2 LINE L2 -6 3307 2929 450 280 106 24 chr10 7664084 7664161 -137925127 - L3 LINE CR1 -11 1566 1497 2119 113 30 88 chr10 7664161 7664559 -137924729 - THE1C LTR MaLR 0 375 1 450 280 106 24 chr10 7664559 7664688 -137924600 - L3 LINE CR1 -80 1497 1343 890 292 4 25 chr10 7665149 7665392 -137923896 - MIR SINE MIR -1 261 24 509 284 47 30 chr10 7665677 7665846 -137923442 - MIR SINE MIR -28 234 63 2950 107 34 2 chr10 7665863 7666275 -137923013 + Charlie3 DNA MER1_type 87 511 -2199 * 3473 84 24 0 chr10 7666260 7666714 -137922574 + Charlie3 DNA MER1_type 2242 2706 -4 243 255 4 31 chr10 7666914 7666987 -137922301 + MIR3 SINE MIR 15 85 -132 265 279 0 0 chr10 7666992 7667053 -137922235 + CT-rich Low_complexity Low_complexity 4 64 0 875 165 6 19 chr10 7667666 7667824 -137921464 + FRAM SINE Alu 1 155 -21 311 270 114 28 chr10 7667863 7668005 -137921283 + MIR3 SINE MIR 5 161 -101 2120 123 0 0 chr10 7668005 7668306 -137920982 + AluSg SINE Alu 1 301 -9 311 270 114 28 chr10 7668306 7668374 -137920914 + MIR3 SINE MIR 161 222 -40 206 157 0 39 chr10 7668832 7668883 -137920405 + GA-rich Low_complexity Low_complexity 3 51 0 963 300 101 31 chr10 7669981 7670728 -137918560 + L2 LINE L2 2513 3311 -2 25 0 0 0 chr10 7672751 7672776 -137916512 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr10 7673142 7673171 -137916117 + AT_rich Low_complexity Low_complexity 1 29 0 673 171 0 0 chr10 7673202 7673307 -137915981 - FLAM_A SINE Alu -15 127 23 1976 92 20 33 chr10 7673322 7673628 -137915660 - AluSx SINE Alu -9 303 2 2145 128 0 0 chr10 7673654 7673966 -137915322 - AluSx SINE Alu 0 312 1 641 318 55 25 chr10 7674212 7674341 -137914947 - MIR SINE MIR -22 240 101 415 95 24 83 chr10 7674341 7674425 -137914863 + MADE1 DNA Mariner 1 79 -1 641 318 55 25 chr10 7674425 7674496 -137914792 - MIR SINE MIR -161 101 34 574 244 144 12 chr10 7675136 7675296 -137913992 + MER5A DNA MER1_type 9 189 0 194 328 8 74 chr10 7675296 7675376 -137913912 - MIR3 SINE MIR -48 160 89 2138 106 0 0 chr10 7675376 7675677 -137913611 - AluSx SINE Alu -7 305 5 194 328 8 74 chr10 7675677 7675718 -137913570 - MIR3 SINE MIR -119 89 47 2542 39 0 3 chr10 7676347 7676659 -137912629 + AluY SINE Alu 1 311 0 1762 149 7 19 chr10 7677691 7678000 -137911288 - AluJb SINE Alu -7 305 1 197 264 226 9 chr10 7678346 7678452 -137910836 - MIR SINE MIR -50 212 84 2033 95 65 3 chr10 7679834 7680128 -137909160 - AluSx SINE Alu 0 312 1 410 291 45 8 chr10 7680266 7680400 -137908888 - MIR SINE MIR -56 206 68 1940 160 0 0 chr10 7680879 7681185 -137908103 - AluSx SINE Alu -6 306 1 255 61 0 0 chr10 7681559 7681592 -137907696 + (TTTC)n Simple_repeat Simple_repeat 1 33 0 2151 111 0 0 chr10 7681894 7682191 -137907097 + AluSg SINE Alu 1 297 -13 274 238 83 0 chr10 7683190 7683274 -137906014 + MIR SINE MIR 122 212 -50 549 345 24 5 chr10 7683312 7683521 -137905767 - MIR SINE MIR -1 261 49 21 0 0 0 chr10 7683748 7683769 -137905519 + AT_rich Low_complexity Low_complexity 1 21 0 973 139 0 6 chr10 7683769 7683927 -137905361 - AluSg/x SINE Alu -23 286 130 270 0 0 0 chr10 7684801 7684831 -137904457 + (TG)n Simple_repeat Simple_repeat 2 31 0 1643 158 44 10 chr10 7685097 7685395 -137903893 - AluJb SINE Alu -4 308 1 325 250 3 0 chr10 7685425 7685506 -137903782 + AluJ/FLAM SINE Alu 1 64 -238 1503 142 64 28 chr10 7685960 7686242 -137903046 + AluJo SINE Alu 1 292 -20 418 297 97 26 chr10 7686359 7686514 -137902774 - MIR SINE MIR -77 185 20 2201 100 0 0 chr10 7686617 7686927 -137902361 + AluSx SINE Alu 3 312 0 356 211 117 16 chr10 7688704 7688832 -137900456 + Charlie1 DNA MER1_type 2621 2761 0 1447 165 0 92 chr10 7689339 7689517 -137899771 - AluJo SINE Alu -10 302 166 2078 117 7 0 chr10 7689517 7689817 -137899471 - AluSp SINE Alu -11 302 1 1447 165 0 92 chr10 7689817 7689965 -137899323 - AluJo SINE Alu -146 166 6 26 0 0 0 chr10 7689996 7690022 -137899266 + AT_rich Low_complexity Low_complexity 1 26 0 237 196 0 98 chr10 7690034 7690146 -137899142 - Charlie7 DNA MER1_type -61 2551 2451 1748 167 7 24 chr10 7691922 7692215 -137897073 - AluJb SINE Alu -21 291 4 797 298 82 70 chr10 7692376 7692960 -137896328 - L1MC4a LINE L1 -1907 5901 5311 1800 143 68 0 chr10 7693083 7693376 -137895912 - AluSx SINE Alu 0 311 1 215 79 26 0 chr10 7693385 7693423 -137895865 + (TA)n Simple_repeat Simple_repeat 2 40 0 285 266 87 49 chr10 7693598 7693782 -137895506 + L1MCc LINE L1 14 204 -6219 890 139 0 8 chr10 7694197 7694326 -137894962 - AluJb SINE Alu -21 291 164 618 251 22 27 chr10 7694550 7695125 -137894163 + L1MCc LINE L1 1263 2146 -4795 1435 224 11 0 chr10 7695127 7695391 -137893897 + Tigger7 DNA MER2_type 1 267 -466 688 136 0 19 chr10 7695392 7695495 -137893793 + Tigger7 DNA MER2_type 2387 2487 0 2152 140 7 0 chr10 7696446 7696753 -137892535 - AluSx SINE Alu -3 309 1 577 259 57 57 chr10 7697026 7697219 -137892069 - MLT1L LTR MaLR -399 216 24 2185 86 7 30 chr10 7697564 7697866 -137891422 + AluSp SINE Alu 19 313 0 1854 141 48 7 chr10 7698407 7698698 -137890590 - AluSx SINE Alu -9 303 1 189 382 24 18 chr10 7698880 7699045 -137890243 + L2 LINE L2 2919 3084 -188 276 338 0 0 chr10 7699057 7699137 -137890151 + MIR SINE MIR 12 91 -171 1012 246 45 34 chr10 7699137 7699450 -137889838 - LTR40b LTR ERVL 0 462 154 3895 122 27 42 chr10 7699450 7700115 -137889173 + L1PA13 LINE L1 5509 6163 0 2027 188 5 5 chr10 7700115 7700499 -137888789 + L1PB4 LINE L1 5769 6152 -4 1012 246 45 34 chr10 7700499 7700612 -137888676 - LTR40b LTR ERVL -307 155 73 396 278 0 0 chr10 7700675 7700783 -137888505 + MIR SINE MIR 89 196 -66 649 135 8 71 chr10 7700894 7701020 -137888268 - FLAM_C SINE Alu -15 118 1 388 287 70 0 chr10 7701343 7701472 -137887816 + MIR SINE MIR 94 231 -31 24 32 0 0 chr10 7702557 7702588 -137886700 + AT_rich Low_complexity Low_complexity 1 31 0 2304 97 7 0 chr10 7702815 7703123 -137886165 - AluY SINE Alu -1 310 1 281 188 0 88 chr10 7703527 7703582 -137885706 + MLT1J1 LTR MaLR 352 399 -47 2079 129 3 0 chr10 7703582 7703876 -137885412 - AluSx SINE Alu -17 295 1 281 188 0 88 chr10 7703876 7703900 -137885388 + MLT1J1 LTR MaLR 399 424 -22 797 284 120 12 chr10 7704154 7704495 -137884793 + LTR16C LTR ERVL 107 484 -7 301 309 55 0 chr10 7705150 7705260 -137884028 + L2 LINE L2 3198 3313 0 529 70 14 0 chr10 7706016 7706087 -137883201 - L1PA5 LINE L1 -239 5916 5845 1913 42 8 4 chr10 7706087 7706306 -137882982 + L1PA5 LINE L1 5917 6149 -5 256 24 49 0 chr10 7706306 7706347 -137882941 + (TA)n Simple_repeat Simple_repeat 1 43 0 1560 183 39 7 chr10 7706919 7707196 -137882092 + AluJo SINE Alu 1 289 -23 774 84 0 0 chr10 7707196 7707303 -137881985 + (GGGA)n Simple_repeat Simple_repeat 4 110 0 2255 108 0 3 chr10 7707692 7707989 -137881299 + AluSc SINE Alu 1 296 -13 2349 82 3 0 chr10 7708107 7708400 -137880888 - AluSq SINE Alu -19 294 1 234 366 37 8 chr10 7708735 7708869 -137880419 - L2 LINE L2 -9 3263 3126 1432 107 65 0 chr10 7708945 7709161 -137880127 + MER30 DNA MER1_type 1 230 0 238 257 81 14 chr10 7709341 7709415 -137879873 + MIR3 SINE MIR 89 167 -41 440 134 24 0 chr10 7709463 7709545 -137879743 + CT-rich Low_complexity Low_complexity 4 87 0 1220 124 295 8 chr10 7709568 7709802 -137879486 - AluSq SINE Alu -1 302 2 1678 146 13 73 chr10 7709842 7710157 -137879131 - AluJb SINE Alu -16 296 1 183 42 0 0 chr10 7710378 7710402 -137878886 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 244 354 0 0 chr10 7710770 7710883 -137878405 + GA-rich Low_complexity Low_complexity 5 117 0 3648 74 2 4 chr10 7710947 7711418 -137877870 + L1PA10 LINE L1 5691 6160 -8 186 43 0 0 chr10 7712634 7712657 -137876631 + (T)n Simple_repeat Simple_repeat 1 23 0 238 309 12 0 chr10 7712741 7712822 -137876466 - MLT1J LTR MaLR -310 201 120 512 197 33 40 chr10 7712937 7713089 -137876199 + MLT1D LTR MaLR 4 154 -351 772 204 38 6 chr10 7713158 7713347 -137875941 + MLT1D LTR MaLR 311 545 -4 244 308 0 0 chr10 7713347 7713425 -137875863 - L1ME LINE L1 -279 5891 5814 420 290 150 34 chr10 7713458 7713810 -137875478 - L1ME LINE L1 -463 5699 5378 2069 126 11 3 chr10 7714308 7714594 -137874694 + AluSx SINE Alu 5 292 -20 2095 328 38 23 chr10 7714843 7715971 -137873317 + HERV16 LTR ERVL 2262 3080 -1916 3122 232 24 51 chr10 7716054 7717470 -137871818 + L1M4 LINE L1 3813 5093 -1053 547 306 104 0 chr10 7718154 7718376 -137870912 - MIR SINE MIR -6 256 12 2388 178 71 11 chr10 7718440 7718906 -137870382 - MLT1D LTR MaLR 0 505 12 2057 133 18 33 chr10 7719119 7719616 -137869672 + L1MB7 LINE L1 2806 6009 -175 2183 92 0 62 chr10 7719695 7720020 -137869268 - AluSq SINE Alu -8 305 1 1823 112 0 0 chr10 7720442 7720691 -137868597 - AluSx SINE Alu 0 312 64 22 0 0 0 chr10 7722305 7722327 -137866961 + AT_rich Low_complexity Low_complexity 1 22 0 407 130 413 0 chr10 7722327 7722419 -137866869 + AluJo SINE Alu 7 136 -176 39 0 0 0 chr10 7722419 7722458 -137866830 + AT_rich Low_complexity Low_complexity 1 39 0 2266 110 0 3 chr10 7722587 7722887 -137866401 + AluSx SINE Alu 1 299 -13 2176 152 17 6 chr10 7723267 7723628 -137865660 + MLT1A1 LTR MaLR 1 365 0 320 296 76 63 chr10 7724015 7724552 -137864736 - L1ME LINE L1 -292 5829 5270 213 119 0 0 chr10 7724552 7724594 -137864694 + (TC)n Simple_repeat Simple_repeat 2 43 0 686 214 0 0 chr10 7724617 7724734 -137864554 - FLAM_A SINE Alu -13 129 13 2068 131 0 31 chr10 7725245 7725566 -137863722 + AluSx SINE Alu 1 311 -1 475 189 57 0 chr10 7726091 7726197 -137863091 - MIR SINE MIR -98 164 53 264 30 0 0 chr10 7727155 7727188 -137862100 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 222 241 0 19 chr10 7727564 7727618 -137861670 + GA-rich Low_complexity Low_complexity 4 56 0 2293 104 3 3 chr10 7727840 7728139 -137861149 + AluSq SINE Alu 1 299 -14 817 144 0 0 chr10 7728157 7728275 -137861013 + FLAM_C SINE Alu 4 121 -22 792 181 181 16 chr10 7728540 7728728 -137860560 + MER20 DNA MER1_type 1 219 0 205 75 75 0 chr10 7729993 7730033 -137859255 + A-rich Low_complexity Low_complexity 4 46 0 25 0 0 0 chr10 7730119 7730144 -137859144 + AT_rich Low_complexity Low_complexity 1 25 0 466 261 76 53 chr10 7731894 7732186 -137857102 + L1ME1 LINE L1 5761 6045 -117 1579 139 58 0 chr10 7732186 7732445 -137856843 - L1PB4 LINE L1 -3 6153 5880 679 159 0 0 chr10 7732445 7732552 -137856736 - U6 snRNA snRNA 0 107 1 466 261 76 53 chr10 7732552 7732651 -137856637 + L1ME1 LINE L1 6044 6162 0 24 0 0 0 chr10 7732881 7732905 -137856383 + AT_rich Low_complexity Low_complexity 1 24 0 1046 215 89 15 chr10 7732937 7733101 -137856187 - HAL1 LINE L1 -116 2391 2241 426 20 0 0 chr10 7733101 7733152 -137856136 + (CA)n Simple_repeat Simple_repeat 1 51 0 1046 215 89 15 chr10 7733152 7733312 -137855976 - HAL1 LINE L1 -266 2241 2043 257 291 27 9 chr10 7733344 7733454 -137855834 - HAL1 LINE L1 -652 1855 1744 180 176 0 0 chr10 7733967 7734001 -137855287 + (CATATA)n Simple_repeat Simple_repeat 2 35 0 290 323 155 0 chr10 7734030 7734185 -137855103 - MIR SINE MIR -82 180 2 304 217 0 0 chr10 7735192 7735252 -137854036 - MIR3 SINE MIR -16 192 133 2150 121 7 0 chr10 7736300 7736589 -137852699 + AluSx SINE Alu 3 293 -19 2007 178 84 63 chr10 7737157 7737646 -137851642 + MLT2B1 LTR ERVL 2 500 -20 189 107 0 0 chr10 7737777 7737805 -137851483 + (A)n Simple_repeat Simple_repeat 1 28 0 1016 273 104 71 chr10 7737808 7738299 -137850989 + MLT1J LTR MaLR 1 507 -4 221 336 71 0 chr10 7738969 7739082 -137850206 + L2 LINE L2 3150 3270 -2 377 293 0 10 chr10 7739988 7740087 -137849201 + L2 LINE L2 3175 3272 0 205 361 0 0 chr10 7740621 7740743 -137848545 + T-rich Low_complexity Low_complexity 1 122 0 819 158 92 30 chr10 7741400 7741564 -137847724 - MER1B DNA MER1_type -85 212 39 1750 156 7 24 chr10 7741608 7741903 -137847385 - AluJb SINE Alu -22 290 1 200 299 45 45 chr10 7742543 7742610 -137846678 - L2 LINE L2 -5 3308 3242 189 0 0 0 chr10 7742754 7742775 -137846513 + (TTCA)n Simple_repeat Simple_repeat 1 21 0 353 355 24 8 chr10 7742775 7742899 -137846389 - L2 LINE L2 -13 3259 3134 366 245 136 32 chr10 7743955 7744110 -137845178 - L1ME4a LINE L1 -57 6064 5894 1422 103 0 19 chr10 7744176 7744389 -137844899 - L1MA2 LINE L1 0 6304 6096 252 59 0 0 chr10 7745281 7745315 -137843973 + (TG)n Simple_repeat Simple_repeat 1 34 0 216 0 0 0 chr10 7745315 7745339 -137843949 + (GA)n Simple_repeat Simple_repeat 1 24 0 1624 236 6 17 chr10 7745339 7745699 -137843589 - MLT2D LTR ERVL -57 357 2 1319 175 0 0 chr10 7746481 7746704 -137842584 - AluJb SINE Alu -18 294 72 1583 171 0 0 chr10 7746713 7746971 -137842317 - AluJb SINE Alu -52 260 3 2003 108 0 34 chr10 7747463 7747786 -137841502 + AluSx SINE Alu 1 312 0 201 147 0 0 chr10 7748187 7748221 -137841067 + (TGAA)n Simple_repeat Simple_repeat 2 35 0 194 274 179 12 chr10 7748434 7748518 -137840770 - MER5B DNA MER1_type -29 149 52 416 301 127 17 chr10 7748913 7749149 -137840139 - MIR SINE MIR 0 262 1 24 67 0 0 chr10 7749700 7749745 -137839543 + AT_rich Low_complexity Low_complexity 1 45 0 1835 121 32 41 chr10 7749872 7750062 -137839226 - AluSx SINE Alu 0 312 125 387 0 0 0 chr10 7750062 7750105 -137839183 + (TG)n Simple_repeat Simple_repeat 2 44 0 1835 121 32 41 chr10 7750105 7750229 -137839059 - AluSx SINE Alu -187 125 1 2033 134 0 0 chr10 7750378 7750683 -137838605 - AluSx SINE Alu -6 306 2 1990 98 33 0 chr10 7751302 7751614 -137837674 - AluSq SINE Alu 0 321 1 200 288 0 17 chr10 7752510 7752569 -137836719 + GA-rich Low_complexity Low_complexity 3 60 0 192 77 0 0 chr10 7752570 7752596 -137836692 + (GGGA)n Simple_repeat Simple_repeat 3 28 0 807 181 7 13 chr10 7752609 7752764 -137836524 + FRAM SINE Alu 6 159 -17 2217 113 0 0 chr10 7752885 7753195 -137836093 - AluSx SINE Alu -2 310 1 1916 193 33 0 chr10 7753268 7753605 -137835683 - MER7A DNA MER2_type 0 346 1 2397 52 0 3 chr10 7753745 7754050 -137835238 + AluY SINE Alu 1 304 -7 2019 117 0 7 chr10 7754059 7754367 -137834921 + AluSc SINE Alu 1 306 -3 1874 256 59 24 chr10 7755811 7756386 -137832902 - MLT1G1 LTR MaLR 0 595 1 2074 98 0 3 chr10 7757686 7757971 -137831317 + AluSx SINE Alu 21 304 -8 2347 124 8 8 chr10 7761208 7761563 -137827725 - THE1A LTR MaLR 0 355 1 554 219 231 0 chr10 7761866 7762035 -137827253 + MIR SINE MIR 5 212 -50 442 103 19 159 chr10 7762244 7762318 -137826970 + MLT1C LTR MaLR 3 59 -408 1970 143 0 6 chr10 7762318 7762632 -137826656 - AluSx SINE Alu 0 312 1 442 103 19 159 chr10 7762632 7762664 -137826624 + MLT1C LTR MaLR 59 94 -373 1185 129 0 6 chr10 7762664 7762842 -137826446 + AluSg/x SINE Alu 120 296 -16 1431 195 96 9 chr10 7762842 7763176 -137826112 + MLT1C LTR MaLR 102 464 -3 381 313 63 24 chr10 7764412 7764831 -137824457 + MER113 DNA MER1_type? 2 471 -50 1518 107 4 36 chr10 7766666 7766896 -137822392 - L1P LINE L1 -1275 4871 4648 1255 65 24 0 chr10 7766896 7767062 -137822226 + L1PA8 LINE L1 5997 6168 -4 1518 107 4 36 chr10 7767062 7767084 -137822204 - L1P LINE L1 -1498 4648 4627 4179 135 34 1 chr10 7767815 7768469 -137820819 - L1PA15 LINE L1 -2 6163 5489 255 139 0 0 chr10 7768692 7768728 -137820560 - MER58 DNA MER1_type -2 2418 2383 1963 108 21 0 chr10 7769452 7769738 -137819550 + AluSx SINE Alu 7 298 -14 737 314 104 45 chr10 7769971 7770653 -137818635 + L1MEd LINE L1 26 747 -5372 1668 52 5 5 chr10 7770685 7770897 -137818391 + AluY SINE Alu 1 212 -99 2195 122 0 3 chr10 7771397 7771708 -137817580 - AluSx SINE Alu -2 310 1 973 213 22 0 chr10 7771801 7771984 -137817304 + MER7A DNA MER2_type 1 185 -161 243 302 32 0 chr10 7772373 7772436 -137816852 + MIR SINE MIR 70 134 -74 188 214 36 18 chr10 7772448 7772504 -137816784 + L2 LINE L2 3220 3276 -37 277 279 0 10 chr10 7773894 7773998 -137815290 + G-rich Low_complexity Low_complexity 5 107 0 292 205 121 12 chr10 7774444 7774527 -137814761 + MER3 DNA MER1_type 118 209 0 530 329 26 9 chr10 7774536 7774764 -137814524 - L1ME LINE L1 -345 5776 5545 21 36 0 0 chr10 7774838 7774866 -137814422 + AT_rich Low_complexity Low_complexity 1 28 0 432 280 72 28 chr10 7775025 7775221 -137814067 + L1M4 LINE L1 5221 5420 -748 266 280 224 32 chr10 7775511 7775636 -137813652 - MIR SINE MIR -74 188 40 279 79 0 0 chr10 7776693 7776731 -137812557 + (A)n Simple_repeat Simple_repeat 1 38 0 529 333 45 10 chr10 7777525 7777723 -137811565 - MIR SINE MIR -17 245 41 1915 133 0 10 chr10 7778197 7778499 -137810789 + AluJo SINE Alu 1 299 -13 272 203 34 0 chr10 7778888 7778947 -137810341 - MER58 DNA MER1_type -5 2415 2355 2147 100 3 3 chr10 7778947 7779248 -137810040 - AluSq SINE Alu -12 301 1 854 155 8 0 chr10 7779286 7779415 -137809873 - FLAM_C SINE Alu -3 130 1 24 67 0 0 chr10 7780311 7780356 -137808932 + AT_rich Low_complexity Low_complexity 1 45 0 1794 114 4 14 chr10 7780483 7780763 -137808525 - AluSx SINE Alu 0 312 36 206 296 151 45 chr10 7780763 7780942 -137808346 + L2 LINE L2 2068 2265 -1049 648 70 0 0 chr10 7781140 7781226 -137808062 + (TA)n Simple_repeat Simple_repeat 2 87 0 240 240 0 0 chr10 7782039 7782089 -137807199 - L2 LINE L2 0 3313 3264 2217 88 0 7 chr10 7782339 7782647 -137806641 + AluSc SINE Alu 1 306 -3 212 130 0 43 chr10 7784249 7784282 -137805006 + (TC)n Simple_repeat Simple_repeat 2 34 -11 1516 181 0 27 chr10 7784282 7784575 -137804713 - AluJb SINE Alu -27 285 1 212 130 0 43 chr10 7784575 7784587 -137804701 + (TC)n Simple_repeat Simple_repeat 34 45 0 1873 163 9 34 chr10 7785845 7786157 -137803131 + L1MB5 LINE L1 5829 6133 -41 2262 90 0 10 chr10 7786157 7786469 -137802819 + AluSg SINE Alu 1 309 -1 1873 163 9 34 chr10 7786469 7786505 -137802783 + L1MB5 LINE L1 6133 6168 -6 180 0 0 0 chr10 7786946 7786966 -137802322 + (T)n Simple_repeat Simple_repeat 1 20 0 1429 45 6 0 chr10 7786980 7787159 -137802129 - L1PA8 LINE L1 0 6172 5993 222 338 0 15 chr10 7787233 7787301 -137801987 + L2 LINE L2 3201 3267 -5 830 186 132 0 chr10 7787499 7787666 -137801622 - MER53 DNA DNA 0 189 1 1785 187 15 75 chr10 7788442 7788503 -137800785 - L1MB2 LINE L1 -7 6164 6101 2009 142 3 0 chr10 7788503 7788812 -137800476 - AluSx SINE Alu -2 310 1 1785 187 15 75 chr10 7788812 7789161 -137800127 - L1MB2 LINE L1 -70 6101 5779 281 206 0 22 chr10 7789385 7789477 -137799811 - L1MC4 LINE L1 -1339 6703 6614 1596 114 121 11 chr10 7789496 7789760 -137799528 - AluSg1 SINE Alu -16 293 1 2181 94 3 0 chr10 7789772 7790070 -137799218 - AluSp SINE Alu -14 299 1 2432 63 0 0 chr10 7790471 7790774 -137798514 - AluY SINE Alu -8 303 1 394 345 54 7 chr10 7791828 7791976 -137797312 - MIR SINE MIR -6 256 102 909 186 12 0 chr10 7793205 7793366 -137795922 - MER5A DNA MER1_type -25 164 2 294 284 94 0 chr10 7793430 7793557 -137795731 - L3 LINE CR1 -155 1422 1284 858 307 39 17 chr10 7793694 7794049 -137795239 - L1ME3 LINE L1 -5 6157 5795 2011 79 25 11 chr10 7794121 7794401 -137794887 - AluSq SINE Alu -29 284 1 1750 149 66 30 chr10 7794435 7794797 -137794491 + THE1C LTR MaLR 1 375 0 558 308 122 9 chr10 7794816 7795030 -137794258 - MIR SINE MIR -19 243 6 260 330 157 30 chr10 7795397 7795627 -137793661 - L3b LINE CR1 -76 1507 1249 1531 171 60 17 chr10 7796027 7796326 -137792962 + AluJo SINE Alu 1 312 0 858 209 78 57 chr10 7796375 7796796 -137792492 + L1MC5 LINE L1 7478 7907 -54 2036 115 3 0 chr10 7797454 7797750 -137791538 - AluSx SINE Alu -15 297 1 2150 101 3 13 chr10 7799023 7799330 -137789958 - AluSq SINE Alu -9 304 1 1534 108 31 9 chr10 7799703 7799926 -137789362 + MER30 DNA MER1_type 3 230 0 243 267 76 10 chr10 7800086 7800237 -137789051 - L1M2 LINE L1 -4304 1912 1586 360 309 18 0 chr10 7800266 7800376 -137788912 - L1MEd LINE L1 -5447 672 561 573 225 38 127 chr10 7800715 7800982 -137788306 - MIR SINE MIR 0 262 20 2131 110 3 0 chr10 7801303 7801603 -137787685 + AluSx SINE Alu 1 301 -11 239 308 105 119 chr10 7801763 7802133 -137787155 - L2 LINE L2 0 3272 2908 186 71 0 0 chr10 7802579 7802607 -137786681 + (T)n Simple_repeat Simple_repeat 1 28 0 245 339 51 8 chr10 7803618 7803736 -137785552 + L2 LINE L2 3187 3309 -4 2349 78 7 3 chr10 7803828 7804137 -137785151 + AluSx SINE Alu 1 310 -2 670 222 250 28 chr10 7804276 7804488 -137784800 + MIR SINE MIR 4 262 0 1946 141 0 3 chr10 7804799 7805104 -137784184 + AluSx SINE Alu 1 304 -8 3400 112 23 6 chr10 7805293 7805813 -137783475 - L1MA3 LINE L1 0 6305 5777 379 209 100 0 chr10 7805861 7805971 -137783317 + L1MB7 LINE L1 6064 6184 0 2067 102 7 7 chr10 7806259 7806562 -137782726 + AluSg SINE Alu 1 303 -7 1060 90 0 0 chr10 7806571 7806704 -137782584 + FLAM_C SINE Alu 1 133 0 642 200 74 0 chr10 7806764 7806899 -137782389 - L1ME3A LINE L1 -15 6155 6011 186 43 0 0 chr10 7807131 7807154 -137782134 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1301 332 0 63 chr10 7807156 7807475 -137781813 - AluSx SINE Alu -13 299 1 2165 106 3 0 chr10 7808034 7808327 -137780961 + AluSx SINE Alu 1 294 -18 330 292 96 78 chr10 7808845 7808911 -137780377 + MIR SINE MIR 25 88 -174 2217 100 3 0 chr10 7808911 7809210 -137780078 - AluSp SINE Alu -13 300 1 330 292 96 78 chr10 7809210 7809362 -137779926 + MIR SINE MIR 88 247 -15 330 301 45 85 chr10 7809751 7809997 -137779291 + L3 LINE CR1 517 752 -825 269 292 135 0 chr10 7810348 7810444 -137778844 - MIR SINE MIR -4 258 150 816 277 113 12 chr10 7810486 7810822 -137778466 - MLT1J LTR MaLR -55 456 87 453 275 19 16 chr10 7810852 7811020 -137778268 - MIR SINE MIR -13 195 30 1118 337 94 18 chr10 7811029 7811643 -137777645 + L3 LINE CR1 912 1572 -5 1637 161 17 14 chr10 7812404 7812696 -137776592 + AluJo SINE Alu 1 293 -19 399 258 25 50 chr10 7813399 7813519 -137775769 + MIR SINE MIR 73 189 -73 2400 73 0 6 chr10 7813903 7814216 -137775072 - AluY SINE Alu 0 311 1 27 0 0 0 chr10 7814274 7814301 -137774987 + AT_rich Low_complexity Low_complexity 1 27 0 817 140 26 72 chr10 7814698 7814884 -137774404 - L1MB2 LINE L1 -12 6177 5987 1839 147 6 28 chr10 7815024 7815343 -137773945 - AluJo SINE Alu 0 312 1 2218 114 0 0 chr10 7815650 7815956 -137773332 + AluSq SINE Alu 1 306 -7 1621 176 25 67 chr10 7816795 7817011 -137772277 - MER2 DNA MER2_type 0 344 147 2226 113 0 0 chr10 7817011 7817321 -137771967 + AluSx SINE Alu 1 310 -2 1621 176 25 67 chr10 7817321 7817463 -137771825 - MER2 DNA MER2_type -197 147 1 2079 113 7 0 chr10 7817807 7818109 -137771179 + AluJo SINE Alu 1 304 -8 317 322 109 12 chr10 7818697 7818907 -137770381 + MIR SINE MIR 21 251 -11 329 303 96 34 chr10 7819175 7819353 -137769935 + MIR SINE MIR 3 191 -71 2307 92 0 6 chr10 7819409 7819723 -137769565 + AluSq SINE Alu 1 312 -1 292 256 47 23 chr10 7820752 7820838 -137768450 - MIR SINE MIR -59 203 116 873 151 0 0 chr10 7820841 7820980 -137768308 - AluSg/x SINE Alu -17 295 157 2086 71 0 4 chr10 7821105 7821409 -137767879 + L1PA5 LINE L1 5871 6173 0 1523 157 33 16 chr10 7821795 7822283 -137767005 - AluJo SINE Alu 0 312 1 195 129 0 0 chr10 7822837 7822868 -137766420 + (TATG)n Simple_repeat Simple_repeat 2 32 0 322 176 0 137 chr10 7822868 7822970 -137766318 - L1MC4 LINE L1 -1339 6703 6616 210 136 34 17 chr10 7823013 7823072 -137766216 + (TATATG)n Simple_repeat Simple_repeat 6 65 0 318 192 10 144 chr10 7823076 7823180 -137766108 - L1MC4 LINE L1 -1339 6703 6614 * 325 217 33 65 chr10 7823093 7823185 -137766103 + L1MC4 LINE L1 6614 6702 -1340 310 264 23 11 chr10 7823199 7823286 -137766002 - L1MC4 LINE L1 -1340 6702 6615 224 163 0 23 chr10 7823291 7823334 -137765954 + (TATATG)n Simple_repeat Simple_repeat 1 42 0 317 297 11 22 chr10 7823334 7823425 -137765863 - L1MC4 LINE L1 -1339 6703 6614 521 189 11 28 chr10 7823431 7823611 -137765677 + (TATG)n Simple_repeat Simple_repeat 2 178 0 327 274 48 0 chr10 7823645 7823729 -137765559 + L1MC4 LINE L1 6615 6702 -1340 182 125 0 50 chr10 7823734 7823774 -137765514 + (TATATG)n Simple_repeat Simple_repeat 5 42 0 331 247 0 72 chr10 7823784 7823881 -137765407 - L1MC4 LINE L1 -1339 6703 6614 21 0 0 0 chr10 7827166 7827187 -137762101 + AT_rich Low_complexity Low_complexity 1 21 0 253 212 59 59 chr10 7827360 7827445 -137761843 - MIR SINE MIR -72 136 52 1721 190 5 42 chr10 7827985 7828143 -137761145 + MLT1A1 LTR MaLR 1 163 -202 1955 112 0 4 chr10 7828143 7828420 -137760868 + AluSc SINE Alu 1 276 -33 195 69 0 0 chr10 7828420 7828449 -137760839 + (CAAAA)n Simple_repeat Simple_repeat 1 29 0 1721 190 5 42 chr10 7828449 7828668 -137760620 + MLT1A1 LTR MaLR 161 365 0 24 32 0 0 chr10 7828832 7828863 -137760425 + AT_rich Low_complexity Low_complexity 1 31 0 1747 160 0 17 chr10 7829603 7829896 -137759392 + AluJb SINE Alu 6 293 -19 1243 174 5 0 chr10 7830112 7830336 -137758952 + AluJo SINE Alu 85 309 -3 26 0 0 0 chr10 7833170 7833196 -137756092 + AT_rich Low_complexity Low_complexity 1 26 0 23 54 0 0 chr10 7833500 7833537 -137755751 + AT_rich Low_complexity Low_complexity 1 37 0 1892 121 10 20 chr10 7834675 7834980 -137754308 - AluSx SINE Alu -10 302 1 243 61 0 0 chr10 7835701 7835734 -137753554 + (TTTA)n Simple_repeat Simple_repeat 1 33 0 2006 97 0 7 chr10 7835734 7836013 -137753275 - AluSc SINE Alu -32 277 1 941 125 0 20 chr10 7836494 7836646 -137752642 - FRAM SINE Alu -6 170 22 237 294 11 76 chr10 7837176 7837268 -137752020 - L3b LINE CR1 -100 1483 1398 375 282 215 34 chr10 7837882 7838407 -137750881 - L1M2 LINE L1 -5779 1070 451 226 124 56 34 chr10 7839445 7839534 -137749754 + (TCTCTG)n Simple_repeat Simple_repeat 4 94 0 432 271 56 124 chr10 7839679 7839782 -137749506 - L2 LINE L2 -2 3270 3162 2027 124 0 0 chr10 7839782 7840103 -137749185 + AluSc SINE Alu 3 309 0 432 271 56 124 chr10 7840103 7840442 -137748846 - L2 LINE L2 -110 3162 2858 2059 113 0 0 chr10 7840754 7841046 -137748242 + AluSc SINE Alu 1 292 -17 231 313 35 9 chr10 7841168 7841283 -137748005 + L1ME LINE L1 5614 5731 -390 1059 200 19 0 chr10 7842019 7842229 -137747059 - L1MB5 LINE L1 -323 5851 5638 278 197 28 0 chr10 7842549 7842620 -137746668 - L1MB7 LINE L1 0 6184 6112 188 179 128 0 chr10 7842625 7842664 -137746624 + L2 LINE L2 3224 3267 -5 1657 176 59 7 chr10 7842781 7843195 -137746093 - L1MB5 LINE L1 -577 5603 5164 529 235 35 35 chr10 7843517 7843687 -137745601 - MER5B DNA MER1_type -8 170 1 2068 129 0 39 chr10 7844183 7844492 -137744796 - AluSx SINE Alu -15 297 1 202 308 0 0 chr10 7844578 7844643 -137744645 - MER5B DNA MER1_type -1 177 113 922 251 26 17 chr10 7844643 7844874 -137744414 + L1MB8 LINE L1 5945 6177 -1 451 277 29 78 chr10 7845909 7846151 -137743137 + MIR SINE MIR 6 235 -27 2727 45 0 0 chr10 7846201 7846512 -137742776 + AluY SINE Alu 1 311 0 741 149 75 15 chr10 7847347 7847481 -137741807 - FLAM_C SINE Alu 0 143 2 219 310 58 11 chr10 7847503 7847590 -137741698 - L2 LINE L2 -15 3257 3167 290 282 73 29 chr10 7848939 7849116 -137740172 - L1ME LINE L1 -339 5782 5599 26 0 0 0 chr10 7849138 7849164 -137740124 + AT_rich Low_complexity Low_complexity 1 26 0 2346 65 17 0 chr10 7849165 7849457 -137739831 + AluSg SINE Alu 1 297 -13 545 258 128 16 chr10 7850713 7851135 -137738153 + HAL1 LINE L1 1304 1809 -698 499 264 103 0 chr10 7851168 7851323 -137737965 + HsTC2 DNA Tc2 4 174 -1724 2085 197 64 34 chr10 7851489 7851957 -137737331 - LTR65 LTR ERV1 -20 649 168 207 0 0 0 chr10 7852542 7852565 -137736723 + (A)n Simple_repeat Simple_repeat 1 23 0 1905 151 3 44 chr10 7852574 7852891 -137736397 + AluJo SINE Alu 1 304 -8 207 204 0 0 chr10 7853926 7853970 -137735318 + GA-rich Low_complexity Low_complexity 1 44 0 710 141 8 0 chr10 7853997 7854125 -137735163 + GA-rich Low_complexity Low_complexity 4 132 0 180 125 0 0 chr10 7854143 7854175 -137735113 + (TGAA)n Simple_repeat Simple_repeat 2 33 0 1269 183 23 108 chr10 7855308 7855718 -137733570 + MLT1A2 LTR MaLR 1 374 0 255 348 90 7 chr10 7855749 7855904 -137733384 - MIR SINE MIR -94 168 1 1994 145 10 0 chr10 7856351 7856640 -137732648 + AluSx SINE Alu 1 292 -20 515 105 0 84 chr10 7856640 7856831 -137732457 + (TA)n Simple_repeat Simple_repeat 2 176 0 413 87 43 71 chr10 7856932 7857116 -137732172 + (CATAT)n Simple_repeat Simple_repeat 2 180 0 * 690 73 0 78 chr10 7857074 7857265 -137732023 + (TA)n Simple_repeat Simple_repeat 2 177 0 888 173 52 0 chr10 7857634 7857807 -137731481 + MER5A DNA MER1_type 2 183 -6 578 205 7 66 chr10 7858784 7858981 -137730307 - MLT1G1 LTR MaLR 0 567 418 758 200 190 5 chr10 7859121 7859321 -137729967 - MLT1G1 LTR MaLR -357 238 2 311 177 0 64 chr10 7859325 7859416 -137729872 - L1P4 LINE L1 -335 5839 5753 618 120 22 11 chr10 7859524 7859616 -137729672 + MER58A DNA MER1_type 42 134 0 875 237 69 0 chr10 7859636 7859881 -137729407 + MLT1H1 LTR MaLR 294 555 0 264 179 0 0 chr10 7859881 7859919 -137729369 + Charlie8 DNA MER1_type 2378 2415 -2 2174 87 30 33 chr10 7860254 7860553 -137728735 + AluY SINE Alu 1 298 -13 525 154 34 34 chr10 7861450 7861625 -137727663 + CT-rich Low_complexity Low_complexity 3 177 0 492 62 0 0 chr10 7861789 7861853 -137727435 + (TAGA)n Simple_repeat Simple_repeat 3 66 0 185 267 0 50 chr10 7862603 7862663 -137726625 - MIR3 SINE MIR -24 184 128 2259 111 3 3 chr10 7862746 7863044 -137726244 + AluSq SINE Alu 1 298 -15 1797 224 60 47 chr10 7863393 7863594 -137725694 + MER74B LTR ERVL 56 253 -369 1892 110 3 81 chr10 7863594 7863934 -137725354 + AluSx SINE Alu 1 316 0 1797 224 60 47 chr10 7863934 7864281 -137725007 + MER74B LTR ERVL 253 612 -10 245 284 7 54 chr10 7865107 7865255 -137724033 + L1ME4a LINE L1 5258 5398 -893 345 268 92 1 chr10 7865291 7865441 -137723847 + L1ME4a LINE L1 5386 5549 -613 2153 118 0 3 chr10 7865512 7865799 -137723489 - AluSx SINE Alu -25 287 2 482 218 81 24 chr10 7866184 7866308 -137722980 + MIR SINE MIR 12 142 -120 2167 106 0 7 chr10 7866338 7866620 -137722668 + AluSq SINE Alu 1 280 -33 1887 231 67 8 chr10 7866790 7867280 -137722008 + LTR40a LTR ERVL 1 519 0 22 0 0 0 chr10 7867422 7867444 -137721844 + AT_rich Low_complexity Low_complexity 1 22 0 1805 170 0 3 chr10 7868692 7868981 -137720307 - AluJo SINE Alu -24 288 1 22 56 0 0 chr10 7868986 7869022 -137720266 + AT_rich Low_complexity Low_complexity 1 36 0 267 244 13 13 chr10 7869110 7869188 -137720100 + L1ME4a LINE L1 5531 5608 -513 2425 76 7 0 chr10 7869206 7869507 -137719781 - AluSg SINE Alu -7 303 1 2234 92 3 20 chr10 7869507 7869812 -137719476 - AluSc SINE Alu -9 300 1 502 101 0 0 chr10 7869814 7869883 -137719405 - L1ME LINE L1 -565 5601 5533 903 280 92 30 chr10 7870142 7870510 -137718778 + MLT1I LTR MaLR 17 407 -2 291 254 0 0 chr10 7870510 7870581 -137718707 + L1ME4a LINE L1 5856 5926 -195 3075 118 53 45 chr10 7870902 7871508 -137717780 - MER4B LTR ERV1 0 779 1 2099 137 0 7 chr10 7871560 7871859 -137717429 + AluSx SINE Alu 1 297 -15 28 0 0 0 chr10 7871866 7871894 -137717394 + AT_rich Low_complexity Low_complexity 1 28 0 1728 174 30 21 chr10 7873373 7873707 -137715581 + MER1B DNA MER1_type 1 337 0 1893 142 0 23 chr10 7874167 7874469 -137714819 - AluJb SINE Alu -17 295 1 2209 101 11 0 chr10 7874547 7874833 -137714455 + AluSx SINE Alu 5 293 -19 267 237 172 0 chr10 7875791 7875884 -137713404 - MIR SINE MIR -6 256 148 256 204 74 0 chr10 7875904 7875958 -137713330 + MER69 DNA AcHobo 10 67 -2459 916 179 11 16 chr10 7875966 7876150 -137713138 + MER69 DNA AcHobo 2344 2526 0 617 234 0 0 chr10 7876150 7876287 -137713001 - MIR SINE MIR -92 170 34 2094 141 0 0 chr10 7876585 7876883 -137712405 + AluSx SINE Alu 1 298 -14 308 287 193 7 chr10 7876885 7877035 -137712253 + MER5A DNA MER1_type 12 189 0 429 237 192 5 chr10 7877282 7877480 -137711808 - MIR SINE MIR -17 245 11 439 272 130 24 chr10 7877862 7878079 -137711209 - MIR SINE MIR -28 234 1 22 70 0 0 chr10 7879201 7879244 -137710044 + GC_rich Low_complexity Low_complexity 1 43 0 194 351 0 0 chr10 7881585 7881642 -137707646 - L3b LINE CR1 -8 1575 1519 290 360 40 0 chr10 7882516 7882666 -137706622 + L2 LINE L2 3116 3271 -1 1496 156 113 11 chr10 7883188 7883470 -137705818 - AluSx SINE Alu -1 311 1 639 221 16 0 chr10 7883701 7883828 -137705460 + FLAM_A SINE Alu 10 138 -4 525 183 12 37 chr10 7883828 7883992 -137705296 + GA-rich Low_complexity Low_complexity 1 160 0 234 89 0 44 chr10 7884101 7884146 -137705142 + (GGGA)n Simple_repeat Simple_repeat 2 44 0 207 147 0 59 chr10 7884144 7884212 -137705076 + (GAAA)n Simple_repeat Simple_repeat 1 64 0 * 545 299 19 38 chr10 7884498 7884709 -137704579 + L1MC4a LINE L1 5576 5782 -2026 552 227 89 35 chr10 7884966 7885169 -137704119 + L1MC4a LINE L1 5787 6000 -1808 336 48 0 0 chr10 7885367 7885409 -137703879 + (GGA)n Simple_repeat Simple_repeat 2 43 0 351 0 0 0 chr10 7885549 7885588 -137703700 + (CA)n Simple_repeat Simple_repeat 1 39 0 2067 96 7 31 chr10 7885846 7886175 -137703113 - AluSc SINE Alu 0 323 2 2425 83 3 0 chr10 7887243 7887543 -137701745 - AluY SINE Alu -10 301 1 926 203 56 107 chr10 7888161 7888615 -137700673 + MLT1A2 LTR MaLR 1 370 -4 4218 194 37 73 chr10 7888862 7889054 -137700234 + L1MD2 LINE L1 5093 5290 -1069 2285 93 0 17 chr10 7889054 7889354 -137699934 + AluSq SINE Alu 1 295 -18 4218 194 37 73 chr10 7889354 7889801 -137699487 + L1MD2 LINE L1 5290 5751 -608 1758 166 14 0 chr10 7889801 7890085 -137699203 - AluJo SINE Alu -19 293 6 4218 194 37 73 chr10 7890085 7890296 -137698992 + L1MD2 LINE L1 5751 5968 -391 2062 119 0 58 chr10 7890296 7890624 -137698664 + AluSg SINE Alu 2 310 0 4218 194 37 73 chr10 7890624 7890885 -137698403 + L1MD2 LINE L1 5968 6157 -202 339 25 0 0 chr10 7890885 7890925 -137698363 + (CA)n Simple_repeat Simple_repeat 1 40 0 4218 194 37 73 chr10 7890925 7891120 -137698168 + L1MD2 LINE L1 6157 6357 -2 1221 163 37 20 chr10 7891239 7891484 -137697804 - MLT2D LTR ERVL -165 249 1 1526 97 5 7 chr10 7891556 7891910 -137697378 - MSTA LTR MaLR 0 428 1 455 164 0 0 chr10 7892072 7892145 -137697143 + L1MB5 LINE L1 6069 6141 -33 2002 112 14 20 chr10 7892150 7892445 -137696843 + AluSx SINE Alu 3 295 -17 24 32 0 0 chr10 7892451 7892482 -137696806 + AT_rich Low_complexity Low_complexity 1 31 0 768 204 42 11 chr10 7893048 7893239 -137696049 - MIR SINE MIR 0 262 66 1364 195 101 0 chr10 7893423 7893552 -137695736 + AluJo SINE Alu 5 160 -152 730 210 65 0 chr10 7893552 7893692 -137695596 + FRAM SINE Alu 1 208 0 1158 100 0 6 chr10 7893692 7893872 -137695416 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 752 144 6 24 chr10 7893888 7894055 -137695233 + GA-rich Low_complexity Low_complexity 1 164 0 507 28 0 28 chr10 7894157 7894229 -137695059 + (GGAA)n Simple_repeat Simple_repeat 3 72 0 8684 179 41 14 chr10 7894233 7895261 -137694027 + L1PA16 LINE L1 3342 4340 -1826 237 33 0 0 chr10 7895261 7895291 -137693997 + (CA)n Simple_repeat Simple_repeat 1 30 0 8684 179 41 14 chr10 7895291 7897015 -137692273 + L1PA16 LINE L1 4340 6165 -1 1841 94 102 0 chr10 7897175 7897454 -137691834 + AluSx SINE Alu 1 305 0 331 277 34 20 chr10 7897671 7897819 -137691469 + L1MC5 LINE L1 7636 7785 -176 1633 175 11 3 chr10 7897821 7898106 -137691182 + AluJo SINE Alu 1 287 -25 29 28 0 0 chr10 7898107 7898143 -137691145 + AT_rich Low_complexity Low_complexity 1 36 0 195 358 51 12 chr10 7898240 7898418 -137690870 + L2 LINE L2 2852 3037 -276 856 244 105 4 chr10 7898692 7898930 -137690358 - MIR SINE MIR 0 262 1 1584 92 30 0 chr10 7899853 7900195 -137689093 + L1P4 LINE L1 5141 5489 -685 315 141 0 2 chr10 7900197 7900442 -137688846 + AluSx SINE Alu 1 296 -4 5780 71 0 4 chr10 7900442 7901144 -137688144 + L1PA11 LINE L1 5476 6174 0 1180 254 76 25 chr10 7901350 7901731 -137687557 + MLT1I LTR MaLR 13 409 0 1352 245 82 18 chr10 7902019 7902467 -137686821 - MER20B DNA MER1_type 0 783 307 1527 226 74 6 chr10 7902467 7902607 -137686681 + MLT1A2 LTR MaLR 1 130 -244 2178 97 0 3 chr10 7902607 7902896 -137686392 + AluY SINE Alu 23 310 -1 1527 226 74 6 chr10 7902896 7903091 -137686197 + MLT1A2 LTR MaLR 130 359 -15 680 273 59 52 chr10 7903102 7903211 -137686077 - MER20B DNA MER1_type -472 311 204 2401 111 47 39 chr10 7903211 7903572 -137685716 - THE1B LTR MaLR 0 364 1 12139 104 10 1 chr10 7903572 7905138 -137684150 - THE1B-int LTR MaLR 0 1580 1 2273 123 53 34 chr10 7905138 7905495 -137683793 - THE1B LTR MaLR 0 364 1 680 273 59 52 chr10 7905495 7905669 -137683619 - MER20B DNA MER1_type -578 205 24 3763 206 76 52 chr10 7905793 7906159 -137683129 - Tigger6a DNA MER2_type -519 1078 723 378 0 0 0 chr10 7906159 7906201 -137683087 + (TG)n Simple_repeat Simple_repeat 2 43 0 3763 206 76 52 chr10 7906201 7906883 -137682405 - Tigger6a DNA MER2_type -874 723 4 2510 78 0 0 chr10 7907065 7907371 -137681917 - AluY SINE Alu -5 306 1 2258 84 3 0 chr10 7907816 7908102 -137681186 + AluSp SINE Alu 2 288 -25 1308 154 70 40 chr10 7908123 7908395 -137680893 - AluJo SINE Alu -30 282 3 273 260 30 20 chr10 7909331 7909431 -137679857 - L2 LINE L2 -1 3312 3212 52 64 0 0 chr10 7909955 7910049 -137679239 + AT_rich Low_complexity Low_complexity 1 94 0 2097 121 0 23 chr10 7910070 7910377 -137678911 - AluSx SINE Alu -12 300 1 21 0 0 0 chr10 7910465 7910486 -137678802 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr10 7910585 7910608 -137678680 + AT_rich Low_complexity Low_complexity 1 23 0 255 295 0 26 chr10 7910803 7910881 -137678407 - L2 LINE L2 -1 3312 3237 1735 172 0 10 chr10 7911119 7911410 -137677878 - AluJb SINE Alu -24 288 1 229 148 19 37 chr10 7911585 7911639 -137677649 + C-rich Low_complexity Low_complexity 4 56 0 244 341 161 0 chr10 7912083 7912288 -137677000 - L2 LINE L2 -480 2834 2597 2410 72 7 3 chr10 7912391 7912695 -137676593 + AluSq SINE Alu 1 305 -8 2133 103 3 0 chr10 7913674 7913964 -137675324 - AluSx SINE Alu -21 291 1 1565 163 48 38 chr10 7913969 7914258 -137675030 - AluJo SINE Alu -10 292 1 488 121 0 0 chr10 7914970 7915036 -137674252 - AluS SINE Alu -246 67 2 275 149 37 0 chr10 7915554 7915661 -137673627 + (TATAA)n Simple_repeat Simple_repeat 4 114 0 479 88 67 47 chr10 7915682 7916355 -137672933 + (TATAA)n Simple_repeat Simple_repeat 1 686 0 30 45 0 0 chr10 7916365 7916409 -137672879 + AT_rich Low_complexity Low_complexity 1 44 0 258 227 57 11 chr10 7916419 7916507 -137672781 + L1MC4 LINE L1 6615 6706 -1336 268 330 27 9 chr10 7916571 7916683 -137672605 + Charlie2 DNA MER1_type 18 131 -2651 2169 216 64 82 chr10 7916797 7917493 -137671795 + Charlie2 DNA MER1_type 1869 2576 -286 1626 203 7 3 chr10 7917493 7917783 -137671505 - AluJb SINE Alu -21 291 1 2169 216 64 82 chr10 7917783 7917894 -137671394 + Charlie2 DNA MER1_type 2576 2661 -201 2334 106 3 3 chr10 7917894 7918206 -137671082 + AluSx SINE Alu 1 312 0 2169 216 64 82 chr10 7918206 7918272 -137671016 + Charlie2 DNA MER1_type 2661 2727 -135 726 155 31 54 chr10 7918372 7918501 -137670787 - AluJo SINE Alu -100 212 87 352 267 10 20 chr10 7918503 7918604 -137670684 + Charlie2 DNA MER1_type 2761 2860 -2 2062 126 3 0 chr10 7919167 7919453 -137669835 - AluJb SINE Alu -25 287 1 2065 148 32 42 chr10 7919464 7919842 -137669446 - L1MC1 LINE L1 0 6333 5960 200 284 34 45 chr10 7920064 7920152 -137669136 - MER5B DNA MER1_type -67 111 25 615 122 0 0 chr10 7920472 7920554 -137668734 + AluY SINE Alu 2 83 -228 899 247 131 0 chr10 7920573 7920840 -137668448 + L1ME3 LINE L1 5830 6131 -31 2346 84 3 3 chr10 7920840 7921148 -137668140 + AluY SINE Alu 1 308 -3 1948 123 3 0 chr10 7922115 7922399 -137666889 - AluSg SINE Alu -4 306 22 1815 112 8 0 chr10 7922649 7922899 -137666389 + AluSx SINE Alu 1 252 -60 293 141 0 4 chr10 7922947 7923000 -137666288 + Alu SINE Alu 250 290 -11 754 186 16 0 chr10 7923202 7923326 -137665962 - FLAM_C SINE Alu -16 127 2 772 316 35 23 chr10 7923982 7924324 -137664964 + L1MC4a LINE L1 5567 5912 -1896 228 244 0 0 chr10 7924357 7924402 -137664886 - L1MC4 LINE L1 -1340 6702 6658 1375 99 6 0 chr10 7924537 7924718 -137664570 - AluSg/x SINE Alu -14 296 115 233 224 0 35 chr10 7925288 7925346 -137663942 + CT-rich Low_complexity Low_complexity 2 57 0 2453 90 3 0 chr10 7925788 7926099 -137663189 + AluSp SINE Alu 1 312 -1 989 244 9 18 chr10 7926173 7926394 -137662894 - MER20 DNA MER1_type 0 219 1 550 243 97 138 chr10 7926435 7926950 -137662338 - L2 LINE L2 0 3313 2820 * 3132 288 109 6 chr10 7926940 7928226 -137661062 - L2 LINE L2 -706 2608 1191 1819 148 0 48 chr10 7929880 7930190 -137659098 - AluJb SINE Alu -12 300 6 2009 127 27 7 chr10 7930532 7930832 -137658456 + AluJb SINE Alu 2 307 -5 1659 169 3 40 chr10 7932036 7932337 -137656951 + AluJo SINE Alu 2 291 -21 1935 92 4 15 chr10 7932354 7932615 -137656673 + AluSq SINE Alu 1 258 -55 375 113 0 0 chr10 7932630 7932692 -137656596 + (TA)n Simple_repeat Simple_repeat 2 63 0 2298 114 0 13 chr10 7932960 7933276 -137656012 - AluSx SINE Alu 0 312 1 2004 136 17 0 chr10 7934071 7934365 -137654923 - AluJo SINE Alu -13 299 1 844 183 69 137 chr10 7934666 7934972 -137654316 - MLT2D LTR ERVL 0 414 130 1225 106 0 0 chr10 7934972 7935133 -137654155 - AluSg/x SINE Alu -15 295 135 779 178 0 34 chr10 7935862 7936008 -137653280 + FLAM_C SINE Alu 2 142 -1 1893 5 0 0 chr10 7936298 7936502 -137652786 + AluYb8 SINE Alu 115 318 0 4695 160 28 20 chr10 7936552 7937460 -137651828 + L1MC1 LINE L1 5188 6103 -230 195 288 50 12 chr10 7937952 7938032 -137651256 - MIR SINE MIR -12 250 168 1992 146 0 16 chr10 7938478 7938786 -137650502 + AluJo SINE Alu 1 303 -9 2321 93 3 3 chr10 7938788 7939090 -137650198 + AluSc SINE Alu 6 307 -2 923 138 0 0 chr10 7939377 7939507 -137649781 + FLAM_C SINE Alu 1 130 -3 2934 144 35 38 chr10 7939512 7939586 -137649702 + L1MB7 LINE L1 5514 5587 -597 2934 166 16 14 chr10 7939586 7940101 -137649187 + L1MB7 LINE L1 5655 6172 -12 2934 144 35 38 chr10 7940101 7940124 -137649164 + L1MB7 LINE L1 5587 6172 -12 22 0 0 0 chr10 7940577 7940599 -137648689 + AT_rich Low_complexity Low_complexity 1 22 0 473 285 149 17 chr10 7940801 7941168 -137648120 + MLT1J2 LTR MaLR 1 476 -35 509 286 119 62 chr10 7941372 7941599 -137647689 + MIR SINE MIR 8 247 -15 2196 100 7 0 chr10 7941648 7941982 -137647306 + AluSx SINE Alu 1 336 0 255 125 0 0 chr10 7942016 7942056 -137647232 + (ATG)n Simple_repeat Simple_repeat 3 42 0 2126 98 21 0 chr10 7942509 7942795 -137646493 - AluSx SINE Alu -15 297 6 393 278 70 27 chr10 7943962 7944149 -137645139 + L1ME4a LINE L1 5927 6121 0 1756 211 66 63 chr10 7944767 7944971 -137644317 + L1ME1 LINE L1 5569 5771 -395 2060 112 80 0 chr10 7944971 7945285 -137644003 + MER44D DNA MER2_type 1 609 0 1756 211 66 63 chr10 7945285 7945671 -137643617 + L1ME1 LINE L1 5771 6161 -5 1710 116 113 72 chr10 7945949 7946161 -137643127 + MER46B DNA MER2_type 1 109 -2622 2045 151 3 0 chr10 7946161 7946460 -137642828 + AluSx SINE Alu 11 310 -2 1710 116 113 72 chr10 7946460 7946593 -137642695 + MER46B DNA MER2_type 109 235 -1 2248 127 0 0 chr10 7947405 7947713 -137641575 + AluSx SINE Alu 1 308 -4 317 130 0 0 chr10 7947787 7947833 -137641455 + MADE1 DNA Mariner 1 46 -34 22 35 0 0 chr10 7948443 7948472 -137640816 + AT_rich Low_complexity Low_complexity 1 29 0 2387 93 3 3 chr10 7949308 7949610 -137639678 + AluSp SINE Alu 1 302 -11 1146 183 14 10 chr10 7949613 7949821 -137639467 + AluJo SINE Alu 6 214 -98 284 116 0 55 chr10 7949823 7949883 -137639405 + FLAM SINE Alu 82 132 -1 35 92 0 0 chr10 7949940 7950038 -137639250 + AT_rich Low_complexity Low_complexity 1 98 0 2214 114 0 3 chr10 7951171 7951468 -137637820 + AluSg SINE Alu 1 296 -14 22 0 0 0 chr10 7951565 7951587 -137637701 + AT_rich Low_complexity Low_complexity 1 22 0 193 354 40 10 chr10 7951814 7951913 -137637375 + L2 LINE L2 3148 3249 -23 2166 107 0 29 chr10 7952004 7952314 -137636974 + AluSx SINE Alu 1 301 -11 2015 147 6 16 chr10 7952667 7952981 -137636307 + AluSx SINE Alu 1 311 -1 2263 117 3 0 chr10 7953169 7953476 -137635812 + AluSx SINE Alu 5 312 0 2395 79 0 0 chr10 7954370 7954660 -137634628 - AluSx SINE Alu -22 290 1 440 318 100 35 chr10 7955205 7955516 -137633772 - L3 LINE CR1 -521 1056 726 2294 121 0 6 chr10 7956040 7956355 -137632933 + AluSq SINE Alu 1 313 0 1471 209 58 62 chr10 7957259 7957762 -137631526 + MLT1D LTR MaLR 5 505 0 1117 181 23 9 chr10 7958403 7958624 -137630664 + MER58A DNA MER1_type 1 224 0 860 121 0 50 chr10 7958969 7959109 -137630179 + FLAM_A SINE Alu 1 133 0 641 238 88 59 chr10 7959531 7959804 -137629484 + MLT1L LTR MaLR 2 282 -333 346 242 91 10 chr10 7959916 7960015 -137629273 + MLT1L LTR MaLR 500 606 -9 22 35 0 0 chr10 7960147 7960176 -137629112 + AT_rich Low_complexity Low_complexity 1 29 0 2378 90 0 10 chr10 7960376 7960677 -137628611 + AluSg SINE Alu 1 298 -12 1827 139 4 4 chr10 7960688 7960962 -137628326 + AluSx SINE Alu 1 274 -38 1735 86 0 9 chr10 7960963 7961185 -137628103 + AluSg/x SINE Alu 87 306 -6 1675 161 16 30 chr10 7961196 7961501 -137627787 + AluJo SINE Alu 1 301 -11 690 198 10 134 chr10 7961694 7961970 -137627318 + L1ME3 LINE L1 5930 6170 0 2239 92 0 23 chr10 7962044 7962347 -137626941 + AluSx SINE Alu 1 296 -16 344 227 42 8 chr10 7962347 7962457 -137626831 + L2 LINE L2 3194 3310 -3 2204 119 0 0 chr10 7962887 7963197 -137626091 + AluSg SINE Alu 1 310 0 2151 110 7 0 chr10 7963554 7963856 -137625432 + AluSx SINE Alu 1 304 0 1816 136 39 29 chr10 7963946 7964254 -137625034 - MER2 DNA MER2_type -34 311 1 2058 142 0 19 chr10 7964819 7965129 -137624159 - AluSq SINE Alu -9 304 1 206 345 35 23 chr10 7965433 7965520 -137623768 - L2 LINE L2 -35 3237 3150 1569 167 92 4 chr10 7965898 7966016 -137623272 + AluJb SINE Alu 1 107 -205 225 0 0 0 chr10 7966016 7966041 -137623247 + (CA)n Simple_repeat Simple_repeat 2 26 0 1569 167 92 4 chr10 7966041 7966203 -137623085 + AluJb SINE Alu 107 306 -6 2016 131 3 7 chr10 7966204 7966510 -137622778 + AluSq SINE Alu 2 306 -7 517 170 107 0 chr10 7966525 7966637 -137622651 + Charlie1 DNA MER1_type 2622 2745 -16 186 308 22 33 chr10 7966785 7966876 -137622412 - L3 LINE CR1 -957 620 531 748 165 0 0 chr10 7967360 7967481 -137621807 + FLAM_C SINE Alu 12 132 -11 2161 120 0 3 chr10 7967923 7968222 -137621066 + AluSx SINE Alu 1 298 -14 739 136 36 0 chr10 7968224 7968334 -137620954 - AluJo/FLAM SINE Alu -192 120 7 434 228 205 29 chr10 7968356 7968527 -137620761 - MIR SINE MIR -2 260 60 347 284 0 0 chr10 7968804 7968906 -137620382 + MIR3 SINE MIR 91 192 -16 1929 141 7 34 chr10 7969379 7969677 -137619611 + AluJb SINE Alu 1 290 -22 2454 74 7 7 chr10 7969685 7969995 -137619293 + AluY SINE Alu 1 310 -1 198 0 0 0 chr10 7970696 7970718 -137618570 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 1870 155 13 23 chr10 7970734 7971037 -137618251 + AluSx SINE Alu 1 300 -12 2317 109 3 0 chr10 7971214 7971525 -137617763 - AluSx SINE Alu 0 312 1 1286 193 41 4 chr10 7971985 7972229 -137617059 + AluJb SINE Alu 1 253 -59 29 0 0 0 chr10 7972614 7972643 -137616645 + AT_rich Low_complexity Low_complexity 1 29 0 377 199 69 30 chr10 7973289 7973420 -137615868 + MIR SINE MIR 126 261 -1 2244 81 7 0 chr10 7974299 7974594 -137614694 + L1PA7 LINE L1 5858 6154 0 1404 163 68 44 chr10 7974942 7975236 -137614052 + AluJo SINE Alu 7 307 -5 373 305 17 129 chr10 7975999 7976347 -137612941 - L2 LINE L2 -35 3237 2929 21 0 0 0 chr10 7976442 7976463 -137612825 + AT_rich Low_complexity Low_complexity 1 21 0 2206 124 3 0 chr10 7977070 7977376 -137611912 - AluSq SINE Alu -5 308 2 186 235 20 0 chr10 7978749 7978800 -137610488 - L3 LINE CR1 -1 1576 1525 299 271 192 6 chr10 7979107 7979284 -137610004 - L3 LINE CR1 -48 1529 1320 444 246 39 68 chr10 7979319 7979371 -137609917 + L1MC5 LINE L1 7717 7769 -192 2547 51 3 0 chr10 7979371 7979664 -137609624 - AluY SINE Alu -17 294 1 444 246 39 68 chr10 7979664 7979818 -137609470 + L1MC5 LINE L1 7769 7917 -44 233 376 102 0 chr10 7979843 7980040 -137609248 - L3 LINE CR1 -310 1267 1051 2864 84 0 0 chr10 7980434 7980813 -137608475 - L1PA8 LINE L1 0 6172 5794 445 277 97 9 chr10 7981201 7981390 -137607898 - MER20B DNA MER1_type -8 211 6 1241 217 125 9 chr10 7981627 7981954 -137607334 - MLT1A1 LTR MaLR 0 365 1 2134 134 0 0 chr10 7982351 7982650 -137606638 + AluY SINE Alu 1 299 -12 1282 199 83 11 chr10 7983235 7983501 -137605787 - AluJo SINE Alu -27 285 1 2661 42 0 3 chr10 7983678 7983984 -137605304 - AluY SINE Alu -6 305 1 306 220 34 0 chr10 7984361 7984420 -137604868 - MER2 DNA MER2_type 0 345 285 * 412 231 115 15 chr10 7984412 7984542 -137604746 - MER2 DNA MER2_type -96 143 1 2275 106 0 0 chr10 7984653 7984945 -137604343 + AluSc SINE Alu 1 292 -17 225 264 19 0 chr10 7985014 7985067 -137604221 - L2 LINE L2 -27 3286 3233 1237 210 52 21 chr10 7985250 7985540 -137603748 - AluSx SINE Alu -13 299 1 1592 133 18 0 chr10 7985566 7985791 -137603497 - AluSq SINE Alu -82 231 3 1682 172 3 10 chr10 7985967 7986263 -137603025 + AluSx SINE Alu 1 294 -18 2326 89 7 20 chr10 7986465 7986768 -137602520 - AluSq SINE Alu -14 299 1 1054 210 109 58 chr10 7987512 7987959 -137601329 - MLT1D LTR MaLR -5 462 1 1818 122 22 0 chr10 7988043 7988313 -137600975 - L1PA15 LINE L1 -3 6162 5887 430 250 21 0 chr10 7988771 7988867 -137600421 - MER91A DNA MER1_type -2 194 97 1378 152 0 17 chr10 7989076 7989307 -137599981 + AluJo SINE Alu 86 312 0 489 141 0 0 chr10 7989323 7989404 -137599884 + L1PB4 LINE L1 5874 5954 -200 760 235 7 0 chr10 7989516 7989665 -137599623 + L1PB4 LINE L1 6000 6149 -7 188 300 14 14 chr10 7991820 7991890 -137597398 + L2 LINE L2 2747 2816 -498 920 149 0 0 chr10 7992326 7992629 -137596659 + (GAGTG)n Simple_repeat Simple_repeat 1 303 0 233 224 0 35 chr10 7993161 7993219 -137596069 + CT-rich Low_complexity Low_complexity 2 57 0 2439 90 3 3 chr10 7993661 7993973 -137595315 + AluSp SINE Alu 1 312 -1 918 244 9 18 chr10 7994047 7994268 -137595020 - MER20 DNA MER1_type 0 219 1 408 245 99 140 chr10 7994309 7994824 -137594464 - L2 LINE L2 0 3313 2820 2761 289 104 5 chr10 7994863 7996100 -137593188 - L2 LINE L2 -764 2550 1191 1819 148 0 48 chr10 7997754 7998064 -137591224 - AluJb SINE Alu -12 300 6 2135 106 3 3 chr10 7998406 7998690 -137590598 + AluSq SINE Alu 2 285 -28 537 141 113 42 chr10 7998705 7998847 -137590441 + Charlie1 DNA MER1_type 2604 2755 -6 485 241 25 137 chr10 7998928 7999030 -137590258 - MIR SINE MIR -38 224 163 1994 132 0 0 chr10 7999030 7999325 -137589963 - AluSg SINE Alu -15 295 1 485 241 25 137 chr10 7999325 7999463 -137589825 - MIR SINE MIR -99 163 11 327 134 152 27 chr10 8000679 8000791 -137588497 + MER113 DNA MER1_type? 123 248 -273 1803 160 7 17 chr10 8000931 8001231 -137588057 + AluJo SINE Alu 1 297 -15 543 239 99 72 chr10 8001240 8001598 -137587690 + L1MC4 LINE L1 7083 7458 -584 1848 163 3 10 chr10 8001598 8001899 -137587389 + AluJb SINE Alu 1 299 -13 543 239 99 72 chr10 8001899 8001938 -137587350 + L1MC4 LINE L1 7458 7494 -548 1976 124 3 65 chr10 8002141 8002464 -137586824 + AluSx SINE Alu 1 303 -9 1418 154 0 0 chr10 8002549 8002769 -137586519 + L1MC1 LINE L1 6013 6232 -101 254 257 34 40 chr10 8002877 8003025 -137586263 + L1MC5 LINE L1 7631 7777 -184 1555 197 47 63 chr10 8003074 8003454 -137585834 + MLT1A2 LTR MaLR 1 374 0 612 252 28 69 chr10 8003752 8003970 -137585318 - MIR SINE MIR -53 209 1 230 239 0 0 chr10 8003970 8004014 -137585274 + L2 LINE L2 3266 3309 -4 569 254 73 6 chr10 8007339 8007516 -137581772 + MIR SINE MIR 33 221 -41 2379 91 0 0 chr10 8007650 8007946 -137581342 + AluSc SINE Alu 1 296 -13 595 190 0 50 chr10 8008913 8009034 -137580254 + AluJb SINE Alu 181 295 -17 3597 240 167 30 chr10 8009034 8009743 -137579545 - L1MC2 LINE L1 -214 6130 5520 2291 87 3 7 chr10 8009743 8010042 -137579246 - AluSg SINE Alu -12 298 1 3597 240 167 30 chr10 8010042 8011437 -137577851 - L1MC2 LINE L1 -824 5520 3701 27 29 0 0 chr10 8011762 8011796 -137577492 + AT_rich Low_complexity Low_complexity 1 34 0 2552 57 0 0 chr10 8013212 8013513 -137575775 - AluY SINE Alu -10 301 1 608 227 37 114 chr10 8013866 8014139 -137575149 - MIR SINE MIR -2 260 9 2265 103 0 22 chr10 8014851 8015034 -137574254 - AluSx SINE Alu 0 312 137 2093 86 41 7 chr10 8015034 8015325 -137573963 - AluY SINE Alu -10 301 1 2265 103 0 22 chr10 8015325 8015460 -137573828 - AluSx SINE Alu -175 137 1 2169 80 7 0 chr10 8016836 8017111 -137572177 - AluY SINE Alu -21 290 14 2359 101 0 0 chr10 8017116 8017423 -137571865 - AluSx SINE Alu -5 307 1 353 242 124 25 chr10 8017814 8017975 -137571313 + MER104 DNA Tc2 4 180 0 1838 134 180 0 chr10 8018191 8018497 -137570791 - MER46B DNA MER2_type 0 236 1 797 157 109 58 chr10 8019923 8020196 -137569092 + MER2 DNA MER2_type 2 320 -25 216 307 158 16 chr10 8020286 8020413 -137568875 - L2 LINE L2 -5 3308 3164 381 214 111 56 chr10 8020576 8020702 -137568586 - L2 LINE L2 -9 3304 3172 452 225 217 0 chr10 8020735 8020864 -137568424 + MER58C DNA MER1_type 59 215 0 448 323 90 62 chr10 8020943 8021398 -137567890 + L2 LINE L2 2804 3271 -1 288 194 56 14 chr10 8021754 8021826 -137567462 + MIR SINE MIR 77 151 -111 2528 69 0 0 chr10 8022090 8022395 -137566893 + AluY SINE Alu 1 305 -6 1724 145 4 0 chr10 8022426 8022674 -137566614 + AluJo SINE Alu 1 249 -63 2370 68 10 7 chr10 8022994 8023290 -137565998 + AluSx SINE Alu 1 297 -15 905 159 173 30 chr10 8023896 8024149 -137565139 - Charlie1b DNA MER1_type -244 279 1 1832 123 55 44 chr10 8024678 8024971 -137564317 + AluSx SINE Alu 1 296 -16 22 94 0 0 chr10 8025195 8025259 -137564029 + AT_rich Low_complexity Low_complexity 1 64 0 195 42 0 0 chr10 8025558 8025582 -137563706 + (TG)n Simple_repeat Simple_repeat 1 24 0 831 139 44 63 chr10 8025582 8025735 -137563553 - AluJo SINE Alu -158 154 5 493 225 231 0 chr10 8025891 8026064 -137563224 + MIR SINE MIR 45 257 -5 344 251 124 115 chr10 8026107 8026430 -137562858 - L2 LINE L2 -20 3252 2927 1801 146 43 0 chr10 8026662 8026943 -137562345 - AluSx SINE Alu -19 293 1 480 184 39 0 chr10 8027522 8027625 -137561663 - L1MB7 LINE L1 -14 6170 6064 197 250 59 88 chr10 8027676 8027744 -137561544 - L2 LINE L2 -52 3220 3155 233 275 20 114 chr10 8027757 8027906 -137561382 - L2 LINE L2 -954 2360 2226 1483 167 4 0 chr10 8027979 8028212 -137561076 + AluJb SINE Alu 2 235 -77 1180 145 0 0 chr10 8028212 8028384 -137560904 + AluSg/x SINE Alu 136 307 -3 1577 267 37 12 chr10 8028410 8028561 -137560727 + L1MC4a LINE L1 6453 6599 -1209 2262 76 10 3 chr10 8028561 8028852 -137560436 + AluSx SINE Alu 2 294 -18 1577 267 37 12 chr10 8028852 8029183 -137560105 + L1MC4a LINE L1 6599 6947 -861 1947 107 55 4 chr10 8029205 8029499 -137559789 + AluSq SINE Alu 2 309 0 283 280 19 0 chr10 8029506 8029613 -137559675 + L1MC4 LINE L1 7689 7797 -245 1064 211 118 7 chr10 8029628 8029932 -137559356 + LTR16A LTR ERVL 16 353 -97 305 271 0 12 chr10 8029935 8030020 -137559268 + C-rich Low_complexity Low_complexity 4 87 0 294 227 94 70 chr10 8030029 8030157 -137559131 + LTR16A LTR ERVL 320 450 0 646 202 82 91 chr10 8030158 8030401 -137558887 + HERV16 LTR ERVL 2 242 -4754 1161 292 85 16 chr10 8030530 8031503 -137557785 + HERV16 LTR ERVL 1584 2670 -2326 1206 185 39 5 chr10 8031503 8031708 -137557580 + Tigger5 DNA MER2_type 1 212 -2111 272 146 0 0 chr10 8031721 8031762 -137557526 + MERVL LTR ERVL 4353 4393 -1092 784 358 26 18 chr10 8031809 8032025 -137557263 + MERVL LTR ERVL 4525 4738 -1026 1291 195 30 47 chr10 8032025 8032323 -137556965 - AluJo SINE Alu -15 297 5 784 358 26 18 chr10 8032323 8032562 -137556726 + MERVL LTR ERVL 4738 4984 -780 736 264 122 30 chr10 8033064 8033393 -137555895 + LTR16A LTR ERVL 92 450 0 755 239 32 24 chr10 8033405 8033652 -137555636 + L1MC4 LINE L1 7793 8041 -1 241 368 19 7 chr10 8033728 8033883 -137555405 - L2 LINE L2 -1291 2023 1867 234 0 0 0 chr10 8034445 8034471 -137554817 + (A)n Simple_repeat Simple_repeat 1 26 0 395 186 21 21 chr10 8034517 8034614 -137554674 + MER96B DNA MER1_type? 278 374 -43 185 378 141 15 chr10 8036477 8036747 -137552541 + L2 LINE L2 2674 2977 -337 213 195 0 0 chr10 8036949 8036990 -137552298 + L2 LINE L2 3273 3313 0 1959 151 0 0 chr10 8037095 8037387 -137551901 - AluJo SINE Alu -20 292 1 225 0 0 0 chr10 8037532 8037557 -137551731 + (CTAGG)n Simple_repeat Simple_repeat 2 26 0 284 315 56 0 chr10 8037961 8038050 -137551238 - L2 LINE L2 -9 3263 3170 925 190 0 6 chr10 8039559 8039722 -137549566 + AluJb SINE Alu 137 298 -14 410 236 22 0 chr10 8039790 8039879 -137549409 - L2 LINE L2 -4 3309 3219 1628 182 3 18 chr10 8039942 8040228 -137549060 + AluJo SINE Alu 1 282 -30 2315 91 7 0 chr10 8040228 8040525 -137548763 - AluSg SINE Alu -11 299 1 21 0 0 0 chr10 8040563 8040584 -137548704 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr10 8040834 8040863 -137548425 + AT_rich Low_complexity Low_complexity 1 29 0 3534 155 37 28 chr10 8041930 8042580 -137546708 - L1MB3 LINE L1 -14 6169 5514 206 32 32 0 chr10 8043030 8043061 -137546227 + (TTTTG)n Simple_repeat Simple_repeat 1 32 0 306 275 70 76 chr10 8043794 8043965 -137545323 + MIR SINE MIR 63 232 -30 1476 137 111 19 chr10 8043980 8044091 -137545197 + AluJo SINE Alu 1 100 -212 2512 68 3 0 chr10 8044091 8044400 -137544888 + AluY SINE Alu 1 310 -1 1476 137 111 19 chr10 8044400 8044559 -137544729 + AluJo SINE Alu 100 296 -16 1029 152 0 0 chr10 8044693 8044844 -137544444 + FAM SINE Alu 16 166 -19 2482 78 13 0 chr10 8045343 8045649 -137543639 + AluSx SINE Alu 1 310 -2 3939 176 14 12 chr10 8045758 8046518 -137542770 - L1MC3 LINE L1 -3 7782 7021 254 159 26 142 chr10 8046845 8046958 -137542330 - L1ME3A LINE L1 -106 6064 5965 929 159 28 0 chr10 8047066 8047248 -137542040 - AluSg/x SINE Alu -3 307 121 24 67 0 0 chr10 8048380 8048425 -137540863 + AT_rich Low_complexity Low_complexity 1 45 0 1644 128 84 0 chr10 8048602 8048853 -137540435 - AluSx SINE Alu -18 294 23 263 342 129 13 chr10 8049372 8049527 -137539761 + MIR SINE MIR 20 192 -70 1411 264 76 9 chr10 8050415 8050865 -137538423 - MLT1E2 LTR MaLR 0 626 147 967 258 42 31 chr10 8051009 8051366 -137537922 - HAL1 LINE L1 -904 1603 1243 1586 151 50 7 chr10 8051371 8051650 -137537638 - AluJo SINE Alu 0 312 22 257 123 38 54 chr10 8051750 8051806 -137537482 - AluJo SINE Alu -261 42 1 319 279 62 0 chr10 8051806 8051935 -137537353 - HAL1 LINE L1 -1265 1242 1106 444 314 85 44 chr10 8051935 8052095 -137537193 - MLT1L LTR MaLR 0 615 463 2464 82 3 0 chr10 8052095 8052401 -137536887 + AluSx SINE Alu 1 307 -5 444 314 85 44 chr10 8052401 8052559 -137536729 - MLT1L LTR MaLR -152 463 284 376 317 113 52 chr10 8052566 8053080 -137536208 - HAL1 LINE L1 -1505 1002 458 227 244 197 16 chr10 8053633 8053760 -137535528 + L1ME4a LINE L1 5892 6041 -80 23 0 0 0 chr10 8054497 8054520 -137534768 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr10 8054752 8054781 -137534507 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr10 8055448 8055470 -137533818 + AT_rich Low_complexity Low_complexity 1 22 0 376 212 46 129 chr10 8055646 8055887 -137533401 - L1MC4 LINE L1 -87 7955 7735 2163 100 4 0 chr10 8055900 8056179 -137533109 + AluSp SINE Alu 27 306 -7 758 290 122 12 chr10 8056233 8056661 -137532627 - L1MC4 LINE L1 -537 7505 7031 1422 194 15 7 chr10 8056687 8056960 -137532328 + AluJo SINE Alu 15 289 -23 1027 201 24 36 chr10 8056961 8057210 -137532078 - L1MC4 LINE L1 -1013 7029 6784 299 329 66 51 chr10 8058123 8058260 -137531028 + L2 LINE L2 3134 3272 0 1051 260 100 57 chr10 8058410 8058921 -137530367 + Charlie8 DNA MER1_type 12 544 -1873 2295 92 0 10 chr10 8059331 8059626 -137529662 + AluSg SINE Alu 1 292 -18 518 184 48 0 chr10 8060370 8060473 -137528815 - MER114 LTR ERV -95 553 446 281 130 0 0 chr10 8060631 8060677 -137528611 - AluSc SINE Alu -119 180 135 23 54 0 0 chr10 8061192 8061229 -137528059 + AT_rich Low_complexity Low_complexity 1 37 0 262 224 52 43 chr10 8061292 8061408 -137527880 - MER113 DNA MER1_type? -404 117 1 181 377 35 13 chr10 8061563 8061791 -137527497 - L2 LINE L2 -556 2758 2526 551 301 31 35 chr10 8061975 8062231 -137527057 - MER102b DNA MER1_type -3 338 84 224 267 93 13 chr10 8062237 8062312 -137526976 + MIR SINE MIR 159 239 -23 695 161 65 30 chr10 8062622 8062790 -137526498 - MER5A DNA MER1_type 0 189 16 631 258 60 0 chr10 8062932 8063099 -137526189 + MER5A DNA MER1_type 13 189 0 1254 218 107 3 chr10 8063653 8063951 -137525337 + MER2 DNA MER2_type 6 334 -11 2315 117 0 0 chr10 8064167 8064476 -137524812 - AluSx SINE Alu -3 309 1 344 290 15 70 chr10 8065403 8065603 -137523685 + Charlie8 DNA MER1_type 1 189 -2228 719 190 0 0 chr10 8066079 8066195 -137523093 - FLAM_C SINE Alu -17 116 1 1166 253 30 22 chr10 8066697 8067060 -137522228 - MLT1B LTR MaLR -7 383 18 984 247 74 54 chr10 8067487 8068068 -137521220 + L1MC5 LINE L1 7261 7774 -187 325 336 160 15 chr10 8068090 8068358 -137520930 + L2 LINE L2 2988 3294 -19 2524 71 0 0 chr10 8068728 8069036 -137520252 - AluSx SINE Alu -4 308 1 1822 226 95 74 chr10 8069036 8069605 -137519683 - L1MC5 LINE L1 -435 7526 6934 2282 93 0 0 chr10 8069605 8069896 -137519392 - AluSg SINE Alu -19 291 1 1822 226 95 74 chr10 8069896 8070126 -137519162 - L1MC5 LINE L1 -1027 6934 6710 36 0 0 0 chr10 8070132 8070168 -137519120 + AT_rich Low_complexity Low_complexity 1 36 0 2279 179 13 30 chr10 8070178 8070652 -137518636 - L1MA7 LINE L1 -26 6265 5800 998 134 5 80 chr10 8070656 8070788 -137518500 - L1MA3 LINE L1 0 6305 6191 2017 137 6 19 chr10 8070788 8071102 -137518186 - AluSx SINE Alu -2 310 1 998 134 5 80 chr10 8071102 8071170 -137518118 - L1MA3 LINE L1 -114 6191 6120 504 188 0 0 chr10 8071170 8071250 -137518038 + AluJ/FLAM SINE Alu 5 84 -228 393 162 0 0 chr10 8071250 8071318 -137517970 - L1MA3 LINE L1 -175 6130 6063 * 2889 143 54 6 chr10 8071298 8071813 -137517475 - L1MA7 LINE L1 -475 5816 5293 240 77 0 0 chr10 8072251 8072290 -137516998 - L1MA7 LINE L1 -991 5300 5262 * 1833 191 32 8 chr10 8072286 8072688 -137516600 - L1 LINE L1 -816 5330 4919 278 198 0 62 chr10 8072693 8072774 -137516514 - L1MC5 LINE L1 -1237 6724 6649 1634 108 18 0 chr10 8073370 8073592 -137515696 + MER30 DNA MER1_type 5 230 0 209 308 219 31 chr10 8074182 8074530 -137514758 + L2 LINE L2 1932 2213 -1101 2171 95 57 0 chr10 8074530 8074826 -137514462 - AluSp SINE Alu 0 313 1 209 308 219 31 chr10 8074826 8075051 -137514237 + L2 LINE L2 2213 2613 -701 1406 157 25 98 chr10 8075198 8075333 -137513955 + AluJb SINE Alu 1 144 -168 1964 127 0 0 chr10 8075333 8075601 -137513687 + AluSq SINE Alu 1 268 -45 1406 157 25 98 chr10 8075601 8075613 -137513675 + AluJb SINE Alu 144 155 -157 2135 139 0 0 chr10 8075613 8075915 -137513373 + AluSx SINE Alu 1 302 -10 1406 157 25 98 chr10 8075915 8076084 -137513204 + AluJb SINE Alu 155 295 -17 285 341 67 39 chr10 8076259 8076438 -137512850 - MIR SINE MIR -56 206 23 2174 128 0 7 chr10 8076607 8076934 -137512354 - AluSx SINE Alu 0 312 1 203 79 26 0 chr10 8077162 8077200 -137512088 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 214 273 0 80 chr10 8077743 8077831 -137511457 - MIR SINE MIR -157 105 25 2395 71 0 0 chr10 8078410 8078704 -137510584 - AluY SINE Alu -17 294 1 2470 80 0 3 chr10 8079089 8079403 -137509885 - AluSq SINE Alu 0 313 1 271 336 31 8 chr10 8079516 8079644 -137509644 - L2 LINE L2 -1 3271 3141 25 0 0 0 chr10 8080121 8080146 -137509142 + AT_rich Low_complexity Low_complexity 1 25 0 1638 190 48 0 chr10 8080417 8080712 -137508576 - AluJb SINE Alu -3 309 1 202 232 126 21 chr10 8080966 8081061 -137508227 + MIR SINE MIR 99 203 -59 1675 162 36 4 chr10 8081383 8081661 -137507627 - AluJo SINE Alu -25 287 1 2413 87 0 3 chr10 8082619 8082928 -137506360 - AluSc SINE Alu -1 308 1 633 265 94 32 chr10 8083059 8083452 -137505836 - L1ME LINE L1 -326 5836 5450 2393 69 7 0 chr10 8084205 8084508 -137504780 - AluY SINE Alu -6 305 1 3390 168 73 80 chr10 8084721 8085687 -137503601 + Looper DNA T2_type 1 960 -598 1772 179 3 3 chr10 8085707 8085998 -137503290 - AluJo SINE Alu -19 293 3 716 172 61 37 chr10 8085998 8086021 -137503267 + Looper DNA T2_type 1392 1413 -145 2021 122 3 16 chr10 8086021 8086324 -137502964 - AluSx SINE Alu -13 299 1 716 172 61 37 chr10 8086324 8086463 -137502825 + Looper DNA T2_type 1413 1558 0 671 251 96 35 chr10 8087326 8087525 -137501763 - MIR SINE MIR -21 241 31 1959 148 0 10 chr10 8087917 8088222 -137501066 - AluJb SINE Alu -10 302 1 2154 126 3 0 chr10 8088634 8088928 -137500360 + AluSx SINE Alu 1 295 -17 213 175 0 0 chr10 8088928 8088968 -137500320 + (TA)n Simple_repeat Simple_repeat 1 40 0 1249 263 51 47 chr10 8089151 8089737 -137499551 - L2 LINE L2 0 3313 2736 654 265 44 22 chr10 8089750 8090022 -137499266 - L1MC5 LINE L1 -31 7930 7653 1522 202 20 17 chr10 8090024 8090326 -137498962 - AluJo SINE Alu -9 303 1 917 153 0 0 chr10 8090345 8090482 -137498806 - FRAM SINE Alu -30 146 10 2162 200 50 79 chr10 8090490 8091290 -137497998 - L1MC5 LINE L1 -305 7656 6880 3152 213 91 61 chr10 8091299 8092328 -137496960 - MER63D DNA MER1_type 0 1061 2 2220 240 112 105 chr10 8093160 8094044 -137495244 + HAL1 LINE L1 1 877 -1630 842 135 0 15 chr10 8094044 8094177 -137495111 + FLAM_C SINE Alu 3 133 0 2220 240 112 105 chr10 8094177 8094445 -137494843 + HAL1 LINE L1 877 1165 -1342 2159 65 41 27 chr10 8094445 8094739 -137494549 + AluSx SINE Alu 1 298 -14 2220 240 112 105 chr10 8094739 8094817 -137494471 + HAL1 LINE L1 1165 1241 -1266 883 228 31 9 chr10 8094822 8095050 -137494238 + L1MC5 LINE L1 6644 6876 -1085 2010 235 37 8 chr10 8095064 8095549 -137493739 + MER63C DNA MER1_type 1 499 -431 220 282 0 39 chr10 8096905 8096983 -137492305 + MIR SINE MIR 180 254 -8 250 284 0 0 chr10 8097047 8097136 -137492152 + (TG)n Simple_repeat Simple_repeat 1 89 0 270 299 39 0 chr10 8097150 8097227 -137492061 + L2 LINE L2 2990 3069 -244 2352 58 4 0 chr10 8097227 8097501 -137491787 + AluY SINE Alu 7 281 -30 523 0 0 0 chr10 8097501 8097559 -137491729 + (TAAA)n Simple_repeat Simple_repeat 3 140 0 504 263 72 13 chr10 8097940 8098092 -137491196 + L2 LINE L2 3150 3310 -3 1997 151 0 16 chr10 8098229 8098546 -137490742 + AluJb SINE Alu 1 312 0 676 235 31 131 chr10 8098768 8099029 -137490259 - L1MC5 LINE L1 -852 7109 6902 2246 109 0 40 chr10 8099029 8099206 -137490082 - AluSg1 SINE Alu -1 308 148 2197 88 3 10 chr10 8099206 8099503 -137489785 - AluY SINE Alu -16 295 1 2246 109 0 40 chr10 8099503 8099646 -137489642 - AluSg1 SINE Alu -161 148 1 676 235 31 131 chr10 8099646 8099797 -137489491 - L1MC5 LINE L1 -1059 6902 6738 1082 258 79 21 chr10 8099809 8100698 -137488590 - L1ME LINE L1 -4649 1431 464 1602 200 70 55 chr10 8100758 8101283 -137488005 - L1ME1 LINE L1 -8 6158 5626 608 200 39 15 chr10 8101284 8101414 -137487874 + LTR40b LTR ERVL 330 462 0 554 242 25 12 chr10 8101414 8101569 -137487719 - L1ME1 LINE L1 -1473 4673 4516 2019 137 7 3 chr10 8101569 8101868 -137487420 + AluSx SINE Alu 1 300 -12 361 219 0 62 chr10 8101873 8101969 -137487319 - L1MC4 LINE L1 -1339 6703 6614 213 121 0 0 chr10 8101969 8102002 -137487286 + (TA)n Simple_repeat Simple_repeat 1 33 0 333 235 59 0 chr10 8102005 8102141 -137487147 - L1ME1 LINE L1 -1625 4521 4378 1892 183 28 5 chr10 8102161 8102549 -137486739 - L1MC1 LINE L1 -6 6327 5931 775 218 55 27 chr10 8102550 8102807 -137486481 - L1MA8 LINE L1 -8 6283 6020 400 217 0 0 chr10 8102805 8102888 -137486400 - L1MC1 LINE L1 -483 5695 5613 * 993 225 17 20 chr10 8102885 8103183 -137486105 - L1MC1 LINE L1 -834 5312 5016 2215 58 0 41 chr10 8103426 8103756 -137485532 + AluY SINE Alu 1 318 0 703 315 142 10 chr10 8104449 8104930 -137484358 - L2 LINE L2 -30 3283 2733 2059 128 6 10 chr10 8105217 8105530 -137483758 + AluSx SINE Alu 1 312 0 2604 135 31 2 chr10 8105993 8106414 -137482874 - Tigger2a DNA MER2_type -1 433 1 613 319 16 20 chr10 8106761 8107009 -137482279 + MIR SINE MIR 2 248 -14 468 296 63 6 chr10 8107061 8107220 -137482068 - MIR SINE MIR -92 170 3 23 0 0 0 chr10 8107347 8107370 -137481918 + AT_rich Low_complexity Low_complexity 1 23 0 219 36 0 0 chr10 8107487 8107515 -137481773 + (TG)n Simple_repeat Simple_repeat 2 29 0 420 306 132 3 chr10 8107699 8108010 -137481278 - L1ME LINE L1 -452 5669 5319 2446 97 0 0 chr10 8109526 8109834 -137479454 - AluSp SINE Alu -5 308 1 210 71 0 0 chr10 8110304 8110332 -137478956 + (T)n Simple_repeat Simple_repeat 1 28 0 28 48 0 0 chr10 8111170 8111212 -137478076 + AT_rich Low_complexity Low_complexity 1 42 0 28 0 0 0 chr10 8112735 8112763 -137476525 + AT_rich Low_complexity Low_complexity 1 28 0 34 89 0 0 chr10 8114048 8114138 -137475150 + AT_rich Low_complexity Low_complexity 1 90 0 440 319 77 6 chr10 8115737 8115906 -137473382 - MIR3 SINE MIR -7 201 21 472 214 10 0 chr10 8116250 8116353 -137472935 - MER69 DNA AcHobo 0 2526 2423 305 250 147 38 chr10 8116492 8116676 -137472612 + L1ME3A LINE L1 5956 6159 -11 450 0 0 0 chr10 8116784 8116834 -137472454 + (TATG)n Simple_repeat Simple_repeat 2 51 0 1903 160 4 0 chr10 8116835 8117116 -137472172 - AluSx SINE Alu -29 283 2 21 0 0 0 chr10 8117187 8117208 -137472080 + AT_rich Low_complexity Low_complexity 1 21 0 1551 166 6 94 chr10 8118016 8118347 -137470941 + AluJo SINE Alu 1 302 -10 2089 134 0 13 chr10 8119045 8119352 -137469936 + AluJb SINE Alu 3 305 -7 324 48 0 0 chr10 8119562 8119604 -137469684 + (CA)n Simple_repeat Simple_repeat 2 43 0 318 287 47 53 chr10 8119804 8119954 -137469334 + MIR3 SINE MIR 1 149 -59 278 200 0 0 chr10 8120450 8120500 -137468788 - MIR3 SINE MIR -34 174 125 417 255 83 88 chr10 8120643 8120835 -137468453 + L3 LINE CR1 1308 1498 -79 4960 224 73 27 chr10 8120875 8121864 -137467424 - L1MC4 LINE L1 0 8042 7100 2110 128 86 37 chr10 8121864 8122270 -137467018 - MSTC LTR MaLR -2 426 1 4960 224 73 27 chr10 8122270 8122482 -137466806 - L1MC4 LINE L1 -942 7100 6899 2283 92 0 3 chr10 8122482 8122777 -137466511 - AluSq SINE Alu -19 294 1 4960 224 73 27 chr10 8122777 8123149 -137466139 - L1MC4 LINE L1 -1143 6899 6546 882 159 11 21 chr10 8123149 8123338 -137465950 + L1MB4 LINE L1 5980 6166 -14 285 51 0 0 chr10 8123339 8123378 -137465910 + (CA)n Simple_repeat Simple_repeat 2 40 0 4960 224 73 27 chr10 8123378 8123682 -137465606 - L1MC4 LINE L1 -1495 6547 5984 1741 143 23 33 chr10 8124017 8124318 -137464970 - AluJb SINE Alu -14 298 1 393 286 129 18 chr10 8124596 8124767 -137464521 + MIR SINE MIR 47 236 -26 2293 92 10 0 chr10 8125043 8125346 -137463942 + AluY SINE Alu 1 306 -5 206 158 0 26 chr10 8125556 8125594 -137463694 + T-rich Low_complexity Low_complexity 1 37 0 908 280 70 45 chr10 8126417 8127043 -137462245 + Charlie7 DNA MER1_type 44 685 -1927 1003 253 37 0 chr10 8127407 8127648 -137461640 - MIR SINE MIR 0 262 13 371 315 178 35 chr10 8127683 8128421 -137460867 + L2 LINE L2 2246 3078 -194 222 220 0 0 chr10 8130447 8130506 -137458782 + A-rich Low_complexity Low_complexity 1 59 0 237 65 0 0 chr10 8130915 8130946 -137458342 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 2469 54 3 13 chr10 8132021 8132334 -137456954 + AluY SINE Alu 1 310 -1 2173 109 0 3 chr10 8132962 8133256 -137456032 + AluSx SINE Alu 9 301 -11 296 279 30 79 chr10 8135572 8135737 -137453551 - MIR SINE MIR -46 216 60 2498 66 0 0 chr10 8137349 8137651 -137451637 + AluSg SINE Alu 1 302 -8 2103 126 10 3 chr10 8137682 8137983 -137451305 + AluSx SINE Alu 1 303 -9 23 54 0 0 chr10 8138608 8138645 -137450643 + AT_rich Low_complexity Low_complexity 1 37 0 512 321 101 42 chr10 8139012 8139625 -137449663 - L2 LINE L2 -1 3312 2668 977 296 302 24 chr10 8139729 8141252 -137448036 - L2 LINE L2 -1296 2018 72 994 154 56 2 chr10 8141536 8141823 -137447465 + MER2 DNA MER2_type 1 345 0 1469 171 7 36 chr10 8141950 8142225 -137447063 + AluJo SINE Alu 1 267 -45 42 0 0 0 chr10 8142239 8142281 -137447007 + AT_rich Low_complexity Low_complexity 1 42 0 429 20 0 0 chr10 8142286 8142336 -137446952 + (TG)n Simple_repeat Simple_repeat 2 51 0 540 234 170 23 chr10 8143440 8143658 -137445630 - MER112 DNA MER1_type -3 257 8 26 0 0 0 chr10 8145224 8145250 -137444038 + AT_rich Low_complexity Low_complexity 1 26 0 183 42 0 0 chr10 8145572 8145596 -137443692 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 21 0 0 0 chr10 8147005 8147026 -137442262 + AT_rich Low_complexity Low_complexity 1 21 0 2199 108 23 3 chr10 8147508 8147814 -137441474 + AluSq SINE Alu 1 312 -1 664 106 0 58 chr10 8147918 8148022 -137441266 + AluJ/FLAM SINE Alu 1 98 -214 406 236 87 24 chr10 8150185 8150312 -137438976 + L2 LINE L2 3173 3307 -6 1323 171 148 4 chr10 8151386 8151650 -137437638 - AluJb SINE Alu 0 302 1 1539 191 24 3 chr10 8151906 8152200 -137437088 + AluJb SINE Alu 1 300 -12 27 49 0 0 chr10 8152810 8152851 -137436437 + AT_rich Low_complexity Low_complexity 1 41 0 466 269 99 60 chr10 8153149 8153350 -137435938 - MIR SINE MIR -51 211 3 207 211 19 0 chr10 8154430 8154482 -137434806 + GA-rich Low_complexity Low_complexity 2 54 0 1852 177 0 7 chr10 8154656 8154966 -137434322 - AluJb SINE Alu -4 308 1 405 226 169 16 chr10 8155837 8155961 -137433327 + HsTC2 DNA Tc2 2 144 -1754 * 1198 229 108 20 chr10 8155959 8156366 -137432922 + HsTC2 DNA Tc2 1282 1900 0 1687 157 0 41 chr10 8156423 8156743 -137432545 - AluSx SINE Alu 0 308 1 780 304 170 23 chr10 8157032 8157195 -137432093 - L2 LINE L2 0 3313 3175 2024 125 7 0 chr10 8157195 8157514 -137431774 + AluSx SINE Alu 1 321 0 2203 63 45 0 chr10 8157516 8157803 -137431485 + AluY SINE Alu 1 300 -11 780 304 170 23 chr10 8157803 8158292 -137430996 - L2 LINE L2 -138 3175 2553 5833 148 16 16 chr10 8158709 8159848 -137429440 - L1MC1 LINE L1 0 6333 5196 568 304 44 5 chr10 8159937 8160141 -137429147 - MIR SINE MIR -8 254 43 529 351 67 33 chr10 8160510 8161029 -137428259 - L2 LINE L2 -650 2664 2128 289 277 225 8 chr10 8161073 8161322 -137427966 + HAL1 LINE L1 16 318 -2189 1416 276 161 21 chr10 8161526 8161778 -137427510 + HAL1 LINE L1 640 855 -1652 396 0 0 0 chr10 8161778 8161822 -137427466 + (CA)n Simple_repeat Simple_repeat 2 45 0 1416 276 161 21 chr10 8161822 8162504 -137426784 + HAL1 LINE L1 855 1705 -802 180 242 0 0 chr10 8162639 8162672 -137426616 - L2 LINE L2 -86 3186 3154 2080 142 9 22 chr10 8162873 8163189 -137426099 + AluJo SINE Alu 1 312 0 198 250 0 0 chr10 8163475 8163519 -137425769 + L2 LINE L2 3265 3308 -5 247 301 16 75 chr10 8164940 8165126 -137424162 - Charlie8 DNA MER1_type -2230 187 13 216 315 71 54 chr10 8165148 8165332 -137423956 + L2 LINE L2 2542 2728 -586 387 0 0 0 chr10 8166294 8166337 -137422951 + (TG)n Simple_repeat Simple_repeat 2 44 0 433 315 164 25 chr10 8167787 8168190 -137421098 + L2 LINE L2 2855 3313 0 236 312 239 4 chr10 8168301 8168548 -137420740 + L2 LINE L2 2670 2974 -340 1826 181 3 3 chr10 8168642 8168946 -137420342 + AluJb SINE Alu 1 304 -8 798 154 0 0 chr10 8169132 8169262 -137420026 - FLAM_C SINE Alu -3 130 1 181 331 94 24 chr10 8169318 8169445 -137419843 + L2 LINE L2 2034 2169 -1145 555 305 159 11 chr10 8169527 8170024 -137419264 - L2 LINE L2 -25 3288 2713 1601 166 3 86 chr10 8170266 8170591 -137418697 - AluJo SINE Alu -14 298 1 341 168 25 134 chr10 8171833 8171952 -137417336 - HsTC2a DNA Tc2 -4 738 633 597 271 33 11 chr10 8171987 8172168 -137417120 - HsTC2a DNA Tc2 -515 229 45 220 363 25 55 chr10 8172405 8172606 -137416682 - L2 LINE L2 -251 3062 2868 2342 193 55 4 chr10 8172868 8173391 -137415897 - MER82 DNA MER2_type -94 559 10 582 224 104 37 chr10 8173429 8173893 -137415395 - MLT1H LTR MaLR -16 533 12 180 250 120 30 chr10 8173967 8174067 -137415221 - MIR SINE MIR -89 173 65 236 280 101 0 chr10 8175670 8175791 -137413497 - MIR3 SINE MIR -65 143 10 413 211 72 53 chr10 8178191 8178399 -137410889 + L1MC4 LINE L1 7831 8042 0 26 0 0 27 chr10 8178399 8178410 -137410878 + AT_rich Low_complexity Low_complexity 1 11 -25 2168 109 3 0 chr10 8178410 8178695 -137410593 + AluSg SINE Alu 1 286 -24 26 0 0 27 chr10 8178695 8178720 -137410568 + AT_rich Low_complexity Low_complexity 11 36 0 21 36 0 0 chr10 8179822 8179850 -137409438 + AT_rich Low_complexity Low_complexity 1 28 0 297 0 0 0 chr10 8179997 8180030 -137409258 + (TC)n Simple_repeat Simple_repeat 1 33 0 21 0 0 0 chr10 8180099 8180120 -137409168 + AT_rich Low_complexity Low_complexity 1 21 0 39 38 0 0 chr10 8180505 8180558 -137408730 + AT_rich Low_complexity Low_complexity 1 53 0 483 229 62 3 chr10 8180599 8180749 -137408539 + L1ME3A LINE L1 5790 5946 -224 2238 82 0 20 chr10 8181055 8181341 -137407947 + AluY SINE Alu 1 282 -29 216 0 0 0 chr10 8181341 8181365 -137407923 + (CA)n Simple_repeat Simple_repeat 1 24 0 193 122 0 61 chr10 8181689 8181738 -137407550 + (CAAAAA)n Simple_repeat Simple_repeat 2 47 0 358 107 0 18 chr10 8182557 8182613 -137406675 - MER58 DNA MER1_type 0 2420 2366 333 356 109 24 chr10 8182631 8182878 -137406410 - L2 LINE L2 -172 3100 2833 2032 162 0 3 chr10 8184043 8184351 -137404937 - AluJb SINE Alu -5 307 1 190 218 73 0 chr10 8185173 8185228 -137404060 - MIR SINE MIR -60 148 90 1828 91 0 8 chr10 8185768 8186022 -137403266 + L1PA6 LINE L1 5903 6154 0 243 265 0 0 chr10 8187309 8187411 -137401877 + GA-rich Low_complexity Low_complexity 4 105 0 187 197 0 28 chr10 8187559 8187630 -137401658 + GA-rich Low_complexity Low_complexity 2 70 0 542 159 28 28 chr10 8187782 8187927 -137401361 + GA-rich Low_complexity Low_complexity 6 150 0 22 35 0 0 chr10 8189148 8189177 -137400111 + AT_rich Low_complexity Low_complexity 1 29 0 321 208 62 92 chr10 8189224 8189354 -137399934 - MIR SINE MIR -70 192 67 195 232 116 29 chr10 8189875 8189944 -137399344 + MIR SINE MIR 176 250 -12 807 244 87 30 chr10 8190778 8191008 -137398280 - MIR SINE MIR -19 243 1 1113 190 194 12 chr10 8191228 8191340 -137397948 + AluJo SINE Alu 1 91 -211 279 0 0 0 chr10 8191340 8191371 -137397917 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1113 190 194 12 chr10 8191371 8191505 -137397783 + AluJo SINE Alu 91 292 -10 22 35 0 0 chr10 8191636 8191665 -137397623 + AT_rich Low_complexity Low_complexity 1 29 0 272 199 15 31 chr10 8191988 8192063 -137397225 + MIR SINE MIR 12 85 -123 315 271 216 5 chr10 8192496 8192695 -137396593 - MIR SINE MIR -8 254 14 267 296 12 0 chr10 8192800 8192881 -137396407 - MIR3 SINE MIR -2 206 125 311 228 152 0 chr10 8194638 8194730 -137394558 - MER94 DNA DNA -10 124 19 325 292 199 18 chr10 8195197 8195416 -137393872 + MIR SINE MIR 7 262 0 233 170 21 21 chr10 8195863 8195910 -137393378 + L2 LINE L2 3214 3260 -12 2030 124 0 0 chr10 8196048 8196330 -137392958 + AluSg SINE Alu 1 282 -28 432 37 0 0 chr10 8196330 8196384 -137392904 + (CA)n Simple_repeat Simple_repeat 2 55 0 2345 87 7 0 chr10 8196992 8197291 -137391997 + AluSc SINE Alu 1 301 -8 245 316 38 0 chr10 8197573 8197652 -137391636 - L2 LINE L2 -24 3289 3208 204 309 15 15 chr10 8197815 8197883 -137391405 - L2 LINE L2 -8 3264 3197 236 277 0 0 chr10 8198118 8198183 -137391105 + MER20 DNA MER1_type 132 196 -23 1308 128 0 15 chr10 8198433 8198612 -137390676 - AluSg/x SINE Alu 0 312 135 2089 94 45 3 chr10 8198612 8198900 -137390388 - AluY SINE Alu -11 300 1 1308 128 0 15 chr10 8198900 8198915 -137390373 - AluSg/x SINE Alu -177 135 121 236 280 101 0 chr10 8201433 8201554 -137387734 + MIR3 SINE MIR 10 148 -65 180 250 120 30 chr10 8203157 8203257 -137386031 + MIR SINE MIR 65 173 -89 582 224 104 37 chr10 8203331 8203795 -137385493 + MLT1H LTR MaLR 12 533 -16 2342 193 55 4 chr10 8203833 8204356 -137384932 + MER82 DNA MER2_type 10 559 -94 220 363 25 55 chr10 8204618 8204819 -137384469 + L2 LINE L2 2868 3062 -251 597 271 33 11 chr10 8205056 8205237 -137384051 + HsTC2b DNA Tc2 45 229 -686 341 168 25 134 chr10 8205272 8205391 -137383897 + HsTC2b DNA Tc2 809 914 -4 1598 167 3 84 chr10 8206632 8206955 -137382333 + AluJo SINE Alu 1 297 -15 555 305 159 11 chr10 8207197 8207694 -137381594 + L2 LINE L2 2713 3288 -25 181 331 94 24 chr10 8207776 8207903 -137381385 - L2 LINE L2 -1145 2169 2034 798 154 0 0 chr10 8207959 8208089 -137381199 + FLAM_C SINE Alu 1 130 -3 1813 184 3 3 chr10 8208275 8208579 -137380709 - AluJb SINE Alu -8 304 1 236 312 239 4 chr10 8208673 8208920 -137380368 - L2 LINE L2 -340 2974 2670 433 315 164 25 chr10 8209031 8209434 -137379854 - L2 LINE L2 0 3313 2855 387 0 0 0 chr10 8210884 8210927 -137378361 + (CA)n Simple_repeat Simple_repeat 2 44 0 216 315 71 54 chr10 8211889 8212073 -137377215 - L2 LINE L2 -586 2728 2542 247 301 16 75 chr10 8212095 8212281 -137377007 + Charlie8 DNA MER1_type 13 187 -2230 1256 116 72 0 chr10 8212476 8212657 -137376631 + AluSg/x SINE Alu 112 305 -7 231 228 0 0 chr10 8212728 8212785 -137376503 + L1ME3A LINE L1 6103 6159 -11 2154 131 0 0 chr10 8213025 8213323 -137375965 + AluSx SINE Alu 1 298 -14 228 67 0 0 chr10 8213324 8213354 -137375934 + (TTTC)n Simple_repeat Simple_repeat 2 31 0 197 292 0 97 chr10 8213444 8213516 -137375772 + L2 LINE L2 3127 3191 -81 2315 91 30 0 chr10 8213914 8214212 -137375076 - AluSx SINE Alu -1 311 5 375 23 0 0 chr10 8214496 8214540 -137374748 + (TA)n Simple_repeat Simple_repeat 1 44 0 1567 166 30 51 chr10 8215788 8216084 -137373204 + AluJo SINE Alu 1 290 -22 559 265 256 2 chr10 8216304 8216713 -137372575 + MLT1F1 LTR MaLR 40 567 0 385 339 91 61 chr10 8217352 8217780 -137371508 + L1MC4a LINE L1 6051 6491 -1317 2300 82 13 38 chr10 8217782 8218099 -137371189 - AluSc SINE Alu 0 309 1 846 102 8 8 chr10 8218134 8218252 -137371036 + FLAM_C SINE Alu 1 118 -15 1002 256 31 55 chr10 8218284 8218667 -137370621 + L1MC4a LINE L1 6548 6921 -887 253 272 0 16 chr10 8218667 8218792 -137370496 + GA-rich Low_complexity Low_complexity 2 124 0 400 259 121 91 chr10 8218889 8219305 -137369983 + L1MC5 LINE L1 7026 7475 -486 1990 139 0 0 chr10 8219305 8219578 -137369710 + AluJo SINE Alu 1 273 -39 400 259 121 91 chr10 8219578 8219890 -137369398 + L1MC5 LINE L1 7475 7776 -185 233 323 0 23 chr10 8221068 8221201 -137368087 + (TA)n Simple_repeat Simple_repeat 2 131 0 24 53 0 0 chr10 8221461 8221499 -137367789 + AT_rich Low_complexity Low_complexity 1 38 0 257 138 0 35 chr10 8221571 8221629 -137367659 + (TATG)n Simple_repeat Simple_repeat 3 58 0 523 275 53 6 chr10 8223482 8223653 -137365635 + MLT1K LTR MaLR 84 262 -326 30 0 0 0 chr10 8223954 8223984 -137365304 + AT_rich Low_complexity Low_complexity 1 30 0 1611 174 50 30 chr10 8224013 8224182 -137365106 - AluJo SINE Alu -8 304 125 2040 129 61 3 chr10 8224182 8224476 -137364812 - AluSx SINE Alu -1 311 1 1611 174 50 30 chr10 8224476 8224604 -137364684 - AluJo SINE Alu -187 125 1 363 246 27 27 chr10 8225118 8225228 -137364060 + L1ME LINE L1 5520 5629 -492 252 283 53 33 chr10 8225235 8225387 -137363901 + L1ME LINE L1 5672 5826 -295 1899 165 20 3 chr10 8225447 8225744 -137363544 - AluJb SINE Alu -10 302 1 2249 112 0 0 chr10 8226700 8227003 -137362285 + AluSx SINE Alu 1 303 -9 1005 164 0 0 chr10 8228912 8229092 -137360196 - AluJb SINE Alu 0 315 136 299 161 36 0 chr10 8229764 8229820 -137359468 + MLT1K LTR MaLR 531 588 0 2055 140 0 16 chr10 8230084 8230399 -137358889 + AluSx SINE Alu 1 310 -2 23 86 0 0 chr10 8230728 8230786 -137358502 + AT_rich Low_complexity Low_complexity 1 58 0 642 174 90 7 chr10 8232780 8232935 -137356353 - MER58 DNA MER1_type -2252 168 1 2461 83 0 6 chr10 8233406 8233719 -137355569 - AluY SINE Alu 0 311 1 1033 146 6 6 chr10 8233722 8233887 -137355401 - FRAM SINE Alu -12 164 1 1291 133 0 15 chr10 8236064 8236079 -137353209 + AluSg/x SINE Alu 121 135 -177 2064 97 45 3 chr10 8236079 8236367 -137352921 + AluY SINE Alu 1 300 -11 1291 133 0 15 chr10 8236367 8236546 -137352742 + AluSg/x SINE Alu 135 312 0 236 277 0 0 chr10 8236796 8236861 -137352427 - MER20 DNA MER1_type -23 196 132 204 309 15 15 chr10 8237096 8237164 -137352124 + L2 LINE L2 3197 3264 -8 245 316 38 0 chr10 8237327 8237406 -137351882 + L2 LINE L2 3208 3289 -24 2326 90 10 0 chr10 8237688 8237989 -137351299 - AluSx SINE Alu -8 304 1 1142 227 126 43 chr10 8237989 8238543 -137350745 - L1MC5 LINE L1 -435 7526 6927 1916 102 0 0 chr10 8238558 8238802 -137350486 - AluSx SINE Alu -19 293 50 1530 172 0 44 chr10 8239500 8239796 -137349492 + AluJb SINE Alu 23 305 -7 25 0 0 0 chr10 8240066 8240091 -137349197 + AT_rich Low_complexity Low_complexity 1 25 0 315 238 50 0 chr10 8240134 8240235 -137349053 - L1ME LINE L1 -441 5663 5558 309 345 74 5 chr10 8240502 8240705 -137348583 - L1ME LINE L1 -913 5216 5000 686 273 97 20 chr10 8241635 8242038 -137347250 - L1ME LINE L1 -3453 2676 2243 374 259 126 42 chr10 8242047 8242309 -137346979 - L1ME LINE L1 -4049 2261 1978 1450 199 7 0 chr10 8242405 8242712 -137346576 + Charlie1 DNA MER1_type 2057 2365 -396 971 123 52 110 chr10 8242716 8242759 -137346529 + Charlie1 DNA MER1_type 2472 2516 -245 771 175 0 0 chr10 8242759 8242885 -137346403 + FLAM_A SINE Alu 1 126 -7 971 123 52 110 chr10 8242885 8243035 -137346253 + Charlie1 DNA MER1_type 2516 2643 -118 1977 147 13 3 chr10 8243035 8243342 -137345946 - AluSx SINE Alu -2 310 1 971 123 52 110 chr10 8243342 8243455 -137345833 + Charlie1 DNA MER1_type 2643 2761 0 685 292 69 21 chr10 8243479 8243941 -137345347 - L1MEd LINE L1 -4706 1604 1082 242 255 0 31 chr10 8243986 8244084 -137345204 - L1MEd LINE L1 -5150 982 888 399 293 87 45 chr10 8244146 8244388 -137344900 - L1MEd LINE L1 -5264 855 604 744 273 32 67 chr10 8244854 8245042 -137344246 + MIR SINE MIR 1 179 -83 2235 108 0 7 chr10 8245042 8245174 -137344114 + AluSp SINE Alu 1 132 -181 405 0 0 0 chr10 8245174 8245219 -137344069 + (CA)n Simple_repeat Simple_repeat 2 46 0 2235 108 0 7 chr10 8245219 8245383 -137343905 + AluSp SINE Alu 132 295 -18 744 273 32 67 chr10 8245383 8245447 -137343841 + MIR SINE MIR 179 244 -18 246 338 27 0 chr10 8245422 8245496 -137343792 + L2 LINE L2 3186 3261 -11 * 397 326 39 26 chr10 8246139 8246388 -137342900 + L1ME3A LINE L1 5750 5952 -218 432 0 0 0 chr10 8246557 8246605 -137342683 + (TA)n Simple_repeat Simple_repeat 1 48 0 441 316 124 5 chr10 8246628 8246846 -137342442 + MIR SINE MIR 18 261 -1 214 290 75 21 chr10 8246849 8246942 -137342346 - MIR SINE MIR -152 110 13 2337 98 0 7 chr10 8247087 8247393 -137341895 - AluSx SINE Alu -8 304 1 301 279 91 13 chr10 8247556 8247710 -137341578 - MLT1I LTR MaLR -14 395 230 314 301 78 50 chr10 8248086 8248305 -137340983 + L1M2 LINE L1 734 958 -5891 864 166 7 7 chr10 8248448 8248599 -137340689 - FRAM SINE Alu -25 151 1 2335 91 10 3 chr10 8248607 8248914 -137340374 - AluSq SINE Alu -4 309 1 1637 181 21 3 chr10 8248914 8249201 -137340087 - AluJb SINE Alu -19 293 1 2200 104 7 10 chr10 8249619 8249917 -137339371 + AluSq SINE Alu 1 297 -16 1603 158 9 70 chr10 8250238 8250570 -137338718 - AluJo SINE Alu -2 310 1 238 253 11 53 chr10 8250713 8250808 -137338480 + MIR3 SINE MIR 103 193 -15 1777 168 3 13 chr10 8250890 8251199 -137338089 + AluJb SINE Alu 1 306 -6 223 315 157 22 chr10 8251289 8251423 -137337865 + MIR SINE MIR 64 214 -48 23 68 0 0 chr10 8254514 8254558 -137334730 + AT_rich Low_complexity Low_complexity 1 44 0 180 298 107 12 chr10 8254589 8254673 -137334615 - L3 LINE CR1 -902 675 584 21 36 0 0 chr10 8255075 8255103 -137334185 + AT_rich Low_complexity Low_complexity 1 28 0 366 170 0 0 chr10 8258281 8258357 -137330931 - AluJb SINE Alu 0 305 230 853 172 86 6 chr10 8258359 8258533 -137330755 - AluJb SINE Alu -124 188 1 1950 119 3 17 chr10 8258543 8258845 -137330443 - AluSx SINE Alu -14 298 1 2421 55 6 6 chr10 8258989 8259300 -137329988 - AluY SINE Alu 0 311 1 201 326 47 23 chr10 8259307 8259393 -137329895 - L2 LINE L2 0 3272 3185 2313 91 0 0 chr10 8259597 8259894 -137329394 + AluSq SINE Alu 1 297 -16 1579 158 21 32 chr10 8260201 8260508 -137328780 + AluJo SINE Alu 1 304 0 2105 109 17 3 chr10 8260509 8260811 -137328477 + AluSc SINE Alu 1 306 -3 951 85 23 0 chr10 8260833 8260963 -137328325 - AluSq/x SINE Alu -179 133 1 186 43 0 0 chr10 8261717 8261740 -137327548 + (TA)n Simple_repeat Simple_repeat 1 23 0 2000 104 4 4 chr10 8261742 8262020 -137327268 - AluSc SINE Alu -31 278 1 846 189 19 61 chr10 8262064 8262221 -137327067 + MER3 DNA MER1_type 5 152 -57 1552 193 0 37 chr10 8262221 8262543 -137326745 - AluJo SINE Alu -2 310 1 846 189 19 61 chr10 8262543 8262597 -137326691 + MER3 DNA MER1_type 152 207 -2 2283 81 0 28 chr10 8263279 8263631 -137325657 + AluY SINE Alu 1 343 0 1780 151 14 3 chr10 8263645 8263936 -137325352 + AluJo SINE Alu 5 298 -14 180 0 0 0 chr10 8265001 8265021 -137324267 + (TA)n Simple_repeat Simple_repeat 1 20 0 2199 102 3 7 chr10 8265022 8265326 -137323962 - AluSx SINE Alu -9 303 1 1247 122 0 0 chr10 8266446 8266626 -137322662 - AluSg/x SINE Alu -5 305 126 213 39 0 0 chr10 8266636 8266662 -137322626 + (CA)n Simple_repeat Simple_repeat 2 27 0 2154 86 0 58 chr10 8266739 8267066 -137322222 + AluY SINE Alu 1 308 -3 2331 86 0 0 chr10 8267066 8267367 -137321921 + AluSq SINE Alu 1 301 -12 425 197 0 0 chr10 8267661 8267732 -137321556 - AluS SINE Alu -241 72 2 2212 105 0 22 chr10 8267774 8267910 -137321378 + AluSx SINE Alu 1 139 -173 2211 82 0 0 chr10 8267910 8268229 -137321059 + AluSg SINE Alu 1 319 0 2212 105 0 22 chr10 8268229 8268404 -137320884 + AluSx SINE Alu 139 306 -6 1738 170 7 0 chr10 8268704 8269004 -137320284 + AluJb SINE Alu 1 302 -10 1810 168 3 0 chr10 8269770 8270061 -137319227 - AluJo SINE Alu -20 292 1 234 192 77 0 chr10 8270852 8270871 -137318417 + AluSg/x SINE Alu 115 137 -165 288 105 0 0 chr10 8270871 8270909 -137318379 + Alu SINE Alu 3 40 -260 239 150 25 0 chr10 8271074 8271114 -137318174 + Alu SINE Alu 1 41 -262 1432 150 70 42 chr10 8271240 8271526 -137317762 + AluJo SINE Alu 1 294 -18 2008 102 74 0 chr10 8271633 8271917 -137317371 + AluSp SINE Alu 1 305 -8 320 310 124 8 chr10 8275379 8275508 -137313780 - MIR3 SINE MIR -29 179 36 254 231 15 31 chr10 8276068 8276133 -137313155 + CT-rich Low_complexity Low_complexity 1 64 0 24 0 0 0 chr10 8276255 8276279 -137313009 + GC_rich Low_complexity Low_complexity 1 24 0 218 229 49 33 chr10 8277376 8277437 -137311851 + polypurine Low_complexity Low_complexity 3 64 0 204 40 0 0 chr10 8278659 8278684 -137310604 + (TA)n Simple_repeat Simple_repeat 1 25 0 351 0 0 0 chr10 8278684 8278723 -137310565 + (CA)n Simple_repeat Simple_repeat 2 40 0 387 0 0 0 chr10 8285206 8285249 -137304039 + (TG)n Simple_repeat Simple_repeat 1 43 0 221 159 0 23 chr10 8287487 8287531 -137301757 + G-rich Low_complexity Low_complexity 6 48 0 249 219 0 0 chr10 8287637 8287710 -137301578 + A-rich Low_complexity Low_complexity 1 73 0 21 36 0 0 chr10 8288537 8288565 -137300723 + GC_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr10 8289472 8289494 -137299794 + GC_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr10 8290056 8290085 -137299203 + GC_rich Low_complexity Low_complexity 1 29 0 24 77 0 0 chr10 8292990 8293042 -137296246 + GC_rich Low_complexity Low_complexity 1 52 0 291 164 0 0 chr10 8293322 8293383 -137295905 + GA-rich Low_complexity Low_complexity 1 61 0 216 0 0 0 chr10 8299625 8299649 -137289639 + (TC)n Simple_repeat Simple_repeat 2 25 0 23 0 0 0 chr10 8300919 8300942 -137288346 + AT_rich Low_complexity Low_complexity 1 23 0 351 150 0 0 chr10 8302827 8302887 -137286401 + (T)n Simple_repeat Simple_repeat 1 60 0 2228 97 3 0 chr10 8303807 8304115 -137285173 - AluSx SINE Alu -3 309 1 228 67 0 0 chr10 8304259 8304289 -137284999 + (T)n Simple_repeat Simple_repeat 1 30 0 222 220 0 0 chr10 8304521 8304580 -137284708 + A-rich Low_complexity Low_complexity 1 59 0 237 65 0 0 chr10 8304989 8305020 -137284268 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 2393 61 3 3 chr10 8306095 8306406 -137282882 + AluY SINE Alu 1 311 0 2068 109 0 3 chr10 8307036 8307330 -137281958 + AluSx SINE Alu 9 301 -11 300 279 30 79 chr10 8309646 8309811 -137279477 - MIR SINE MIR -46 216 60 2382 75 0 0 chr10 8311423 8311729 -137277559 + AluSg SINE Alu 1 306 -4 180 77 0 0 chr10 8312256 8312282 -137277006 + (A)n Simple_repeat Simple_repeat 1 26 0 282 143 0 0 chr10 8313055 8313104 -137276184 + (A)n Simple_repeat Simple_repeat 1 49 0 25 0 0 0 chr10 8314791 8314816 -137274472 + AT_rich Low_complexity Low_complexity 1 25 0 2255 93 0 0 chr10 8314831 8315133 -137274155 - AluSx SINE Alu -10 302 1 24 0 0 0 chr10 8315579 8315603 -137273685 + AT_rich Low_complexity Low_complexity 1 24 0 2221 109 0 3 chr10 8315815 8316127 -137273161 - AluSx SINE Alu -1 311 1 246 379 76 8 chr10 8316812 8316944 -137272344 + MIR3 SINE MIR 33 173 -35 2098 128 0 3 chr10 8317015 8317320 -137271968 - AluSx SINE Alu -8 304 1 2147 112 3 0 chr10 8317386 8317691 -137271597 + AluSx SINE Alu 1 306 -6 180 0 0 0 chr10 8317981 8318001 -137271287 + (T)n Simple_repeat Simple_repeat 1 20 0 1930 118 0 0 chr10 8318761 8319033 -137270255 + AluSx SINE Alu 11 282 -30 339 44 0 0 chr10 8319036 8319081 -137270207 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 309 353 25 0 chr10 8319999 8320121 -137269167 - MIR SINE MIR -45 217 93 187 330 45 36 chr10 8320130 8320242 -137269046 + L2 LINE L2 3201 3313 0 892 221 96 12 chr10 8320624 8320864 -137268424 - MLT1D LTR MaLR -39 466 207 2457 65 0 0 chr10 8321495 8321805 -137267483 + AluY SINE Alu 1 310 -1 2154 111 10 0 chr10 8322871 8323178 -137266110 + AluSx SINE Alu 1 310 -2 1495 159 8 8 chr10 8324085 8324343 -137264945 - AluJb SINE Alu -54 258 1 2278 100 0 0 chr10 8324444 8324784 -137264504 + AluSc SINE Alu 1 340 0 504 198 159 32 chr10 8325400 8325526 -137263762 - MIR SINE MIR -19 243 102 1933 116 0 10 chr10 8325591 8325883 -137263405 - AluSx SINE Alu -1 311 23 988 153 47 0 chr10 8326168 8326338 -137262950 - AluJo SINE Alu -131 181 4 2122 107 0 0 chr10 8326577 8326867 -137262421 + AluSc SINE Alu 2 291 -18 1721 142 0 37 chr10 8326879 8327202 -137262086 + AluJo SINE Alu 1 311 -1 28 29 0 0 chr10 8327757 8327792 -137261496 + AT_rich Low_complexity Low_complexity 1 35 0 1753 150 0 32 chr10 8327792 8328105 -137261183 + AluSx SINE Alu 1 303 -9 1492 166 7 25 chr10 8328124 8328401 -137260887 - AluJo SINE Alu -40 272 1 1814 62 25 16 chr10 8328783 8329027 -137260261 - L1PA10 LINE L1 -3 6165 5920 21 0 0 0 chr10 8329063 8329084 -137260204 + AT_rich Low_complexity Low_complexity 1 21 0 1436 196 13 16 chr10 8329679 8329985 -137259303 + AluJo SINE Alu 1 305 -7 2136 92 0 0 chr10 8330250 8330533 -137258755 - AluSg SINE Alu -27 283 1 382 298 0 0 chr10 8331482 8331576 -137257712 + MIR SINE MIR 169 262 0 879 105 0 53 chr10 8331591 8331724 -137257564 + FLAM_C SINE Alu 2 127 -6 1208 154 112 63 chr10 8331762 8332048 -137257240 + AluSp SINE Alu 1 300 -3 278 139 23 0 chr10 8332050 8332093 -137257195 + AluJ/F(R)AM SINE Alu 168 211 -91 1223 110 0 16 chr10 8332125 8332307 -137256981 + AluSg/x SINE Alu 134 312 0 2006 132 0 0 chr10 8333259 8333547 -137255741 + AluSx SINE Alu 1 288 -24 778 149 0 22 chr10 8333680 8333814 -137255474 + FLAM_C SINE Alu 1 131 -2 28 0 0 0 chr10 8334927 8334955 -137254333 + AT_rich Low_complexity Low_complexity 1 28 0 1871 126 0 4 chr10 8334957 8335235 -137254053 + AluSx SINE Alu 3 279 -33 1322 154 14 0 chr10 8335266 8335480 -137253808 + AluSg/x SINE Alu 86 302 -10 218 310 42 0 chr10 8335543 8335614 -137253674 + MIR SINE MIR 111 184 -78 227 167 368 53 chr10 8335682 8335796 -137253492 + L2 LINE L2 3164 3313 0 396 246 70 91 chr10 8335808 8336007 -137253281 - MIR SINE MIR -4 258 64 285 212 273 0 chr10 8336819 8336918 -137252370 + L1ME4a LINE L1 5996 6121 0 405 0 0 0 chr10 8337076 8337121 -137252167 + (CCAA)n Simple_repeat Simple_repeat 2 46 0 2005 128 3 0 chr10 8337200 8337497 -137251791 - AluSx SINE Alu -14 298 1 263 94 0 19 chr10 8337503 8337556 -137251732 + (TTTA)n Simple_repeat Simple_repeat 1 52 0 1565 179 14 10 chr10 8337558 8337854 -137251434 - AluJb SINE Alu -15 297 1 25 31 0 0 chr10 8338078 8338110 -137251178 + AT_rich Low_complexity Low_complexity 1 32 0 704 50 0 40 chr10 8338481 8338581 -137250707 + L1PA5 LINE L1 6059 6154 0 235 384 47 6 chr10 8338871 8339043 -137250245 + MIR3 SINE MIR 28 206 -2 207 217 43 0 chr10 8339416 8339462 -137249826 + MIR SINE MIR 96 143 -65 1886 135 0 42 chr10 8339524 8339836 -137249452 - AluSg SINE Alu -11 299 1 2093 101 0 0 chr10 8340810 8341096 -137248192 - AluSg SINE Alu -4 306 21 1493 167 27 38 chr10 8341137 8341430 -137247858 + AluJb SINE Alu 1 290 -22 2753 151 11 6 chr10 8344369 8344845 -137244443 - L1PA15 LINE L1 0 6165 5688 668 301 51 9 chr10 8344845 8345061 -137244227 + MIR SINE MIR 23 247 -15 335 317 18 41 chr10 8345394 8345615 -137243673 - HAL1 LINE L1 0 2507 2292 882 182 17 17 chr10 8345645 8345826 -137243462 + MER53 DNA DNA 1 181 -8 600 231 88 6 chr10 8345827 8345987 -137243301 - FAM SINE Alu -2 173 1 33 69 0 30 chr10 8346894 8346927 -137242361 + AT_rich Low_complexity Low_complexity 1 33 -65 2181 67 3 20 chr10 8346927 8347224 -137242064 - AluY SINE Alu -19 292 1 33 69 0 30 chr10 8347224 8347291 -137241997 + AT_rich Low_complexity Low_complexity 33 98 0 1733 140 13 33 chr10 8347495 8347802 -137241486 - AluJo SINE Alu -11 301 1 1917 116 0 41 chr10 8348732 8349057 -137240231 + AluSx SINE Alu 1 313 0 364 289 159 15 chr10 8349269 8349470 -137239818 + MIR SINE MIR 9 238 -24 797 146 8 0 chr10 8350059 8350189 -137239099 + AluSg/x SINE Alu 182 312 0 513 0 0 0 chr10 8350467 8350524 -137238764 + (TTTA)n Simple_repeat Simple_repeat 3 59 0 1655 156 0 32 chr10 8350530 8350813 -137238475 - AluJo SINE Alu -38 274 1 228 122 0 0 chr10 8351446 8351487 -137237801 + (CA)n Simple_repeat Simple_repeat 1 41 0 314 234 317 0 chr10 8351669 8351814 -137237474 - MIR SINE MIR -61 201 11 340 354 48 7 chr10 8351821 8351968 -137237320 - MIR3 SINE MIR -33 175 23 1086 146 6 0 chr10 8352719 8352884 -137236404 - AluJb SINE Alu -11 301 136 542 285 85 10 chr10 8353243 8353444 -137235844 - MIR SINE MIR -13 249 33 1708 184 3 3 chr10 8353915 8354208 -137235080 + AluJo SINE Alu 1 293 -19 2060 132 0 3 chr10 8354210 8354498 -137234790 + AluSg SINE Alu 1 287 -23 198 118 0 0 chr10 8354511 8354545 -137234743 + (CAAAAA)n Simple_repeat Simple_repeat 4 37 0 314 298 40 8 chr10 8354554 8354678 -137234610 - MIR3 SINE MIR -15 193 66 1896 152 20 3 chr10 8355541 8355837 -137233451 - AluJb SINE Alu -11 301 1 1279 160 55 108 chr10 8355885 8355973 -137233315 + AluJb SINE Alu 1 92 -220 2724 46 0 0 chr10 8355973 8356279 -137233009 + AluY SINE Alu 1 306 -5 1279 160 55 108 chr10 8356279 8356515 -137232773 + AluJb SINE Alu 92 308 -4 240 86 0 0 chr10 8357043 8357078 -137232210 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 630 226 0 0 chr10 8357081 8357196 -137232092 - AluJb SINE Alu -196 116 2 2462 72 0 13 chr10 8358248 8358552 -137230736 - AluSp SINE Alu -13 300 1 23 0 0 0 chr10 8358690 8358713 -137230575 + AT_rich Low_complexity Low_complexity 1 23 0 691 190 0 0 chr10 8358809 8358925 -137230363 + FRAM SINE Alu 41 156 -20 277 346 155 30 chr10 8359388 8359717 -137229571 + L2 LINE L2 2397 2766 -548 1754 152 24 14 chr10 8359922 8360218 -137229070 - AluJo SINE Alu -13 299 1 242 239 0 0 chr10 8360291 8360337 -137228951 + L2 LINE L2 3137 3182 -90 844 86 44 15 chr10 8360967 8361386 -137227902 + (TCTA)n Simple_repeat Simple_repeat 1 431 0 455 192 0 0 chr10 8361386 8361464 -137227824 - FLAM_A SINE Alu -25 117 40 2212 113 0 0 chr10 8361885 8362177 -137227111 - AluSx SINE Alu -9 303 12 1584 161 73 11 chr10 8362366 8362690 -137226598 + AluJb SINE Alu 1 312 0 200 315 76 0 chr10 8363808 8363900 -137225388 - L2 LINE L2 -860 2454 2356 1190 96 11 0 chr10 8363915 8364093 -137225195 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1606 160 30 11 chr10 8364108 8364377 -137224911 - AluSx SINE Alu -38 274 1 1002 192 12 0 chr10 8364380 8364552 -137224736 - FAM SINE Alu -1 174 1 369 232 238 11 chr10 8364552 8364737 -137224551 - L2 LINE L2 -950 2364 2138 808 126 0 44 chr10 8365294 8365429 -137223859 - FLAM_C SINE Alu 0 133 5 1621 168 8 0 chr10 8365962 8366224 -137223064 + AluJo SINE Alu 27 290 -22 250 287 0 25 chr10 8366830 8366930 -137222358 - MIR SINE MIR -62 146 63 198 274 62 26 chr10 8368096 8368209 -137221079 + MIR SINE MIR 90 206 -56 324 301 29 0 chr10 8368253 8368356 -137220932 + MIR SINE MIR 131 236 -26 2078 137 7 10 chr10 8368734 8369040 -137220248 - AluJb SINE Alu -7 305 1 359 237 43 21 chr10 8369078 8369171 -137220117 + L2 LINE L2 3197 3291 -22 444 106 77 135 chr10 8370011 8370061 -137219227 + HY3 scRNA scRNA 1 43 -58 1951 154 3 10 chr10 8370061 8370372 -137218916 - AluJo SINE Alu -3 309 1 444 106 77 135 chr10 8370372 8370425 -137218863 + HY3 scRNA scRNA 43 98 -3 2024 155 30 0 chr10 8370529 8370832 -137218456 - AluSx SINE Alu 0 312 1 260 227 41 21 chr10 8371115 8371212 -137218076 + CT-rich Low_complexity Low_complexity 4 102 0 312 273 132 34 chr10 8372235 8372440 -137216848 - MER112 DNA MER1_type -23 237 13 402 253 156 21 chr10 8372595 8372832 -137216456 - L1ME4a LINE L1 -1 6120 5852 2409 97 0 0 chr10 8372872 8373183 -137216105 + AluSq SINE Alu 1 311 -2 1593 149 31 35 chr10 8373510 8373771 -137215517 - AluJo SINE Alu -50 262 3 1986 144 0 20 chr10 8373932 8374237 -137215051 - AluSx SINE Alu -13 299 1 225 278 31 10 chr10 8375743 8375840 -137213448 + GA-rich Low_complexity Low_complexity 5 103 0 255 236 0 0 chr10 8376128 8376200 -137213088 + (CA)n Simple_repeat Simple_repeat 2 73 0 2199 116 0 6 chr10 8376210 8376521 -137212767 - AluSx SINE Alu -3 309 1 332 291 10 65 chr10 8377607 8377667 -137211621 - MER5A DNA MER1_type -1 188 126 1793 150 3 52 chr10 8377667 8377974 -137211314 + AluJo SINE Alu 1 292 -20 332 291 10 65 chr10 8377974 8378112 -137211176 - MER5A DNA MER1_type -63 126 1 209 33 33 0 chr10 8379700 8379730 -137209558 + (CCCCCA)n Simple_repeat Simple_repeat 6 36 0 189 0 0 0 chr10 8379789 8379810 -137209478 + (T)n Simple_repeat Simple_repeat 1 21 0 21 0 0 0 chr10 8380180 8380201 -137209087 + AT_rich Low_complexity Low_complexity 1 21 0 1555 201 32 0 chr10 8380509 8380792 -137208496 - AluJb SINE Alu -18 294 3 376 306 25 0 chr10 8383619 8383740 -137205548 + MIR SINE MIR 28 151 -111 707 77 0 0 chr10 8383747 8383838 -137205450 - AluY SINE Alu -16 295 205 271 260 31 10 chr10 8383843 8383939 -137205349 + MIR SINE MIR 150 247 -15 635 277 54 0 chr10 8384450 8384634 -137204654 + MIR SINE MIR 59 252 -10 415 188 77 60 chr10 8385203 8385320 -137203968 - HAL1 LINE L1 0 2507 2389 709 143 36 0 chr10 8385328 8385440 -137203848 - FLAM_A SINE Alu -11 131 16 961 248 134 50 chr10 8385441 8385812 -137203476 - HAL1 LINE L1 -127 2380 2042 2182 130 0 13 chr10 8385812 8386128 -137203160 + AluSx SINE Alu 1 312 0 961 248 134 50 chr10 8386128 8386396 -137202892 - HAL1 LINE L1 -465 2042 1687 703 212 53 11 chr10 8386393 8386582 -137202706 - HAL1 LINE L1 -1042 1465 1269 * 461 167 8 92 chr10 8386585 8386705 -137202583 - FRAM SINE Alu -7 169 60 278 282 76 13 chr10 8386984 8387120 -137202168 - MIR3 SINE MIR -14 194 51 1987 135 0 44 chr10 8387276 8387594 -137201694 + AluJo SINE Alu 1 304 -8 771 169 7 54 chr10 8387643 8387791 -137201497 + FLAM_C SINE Alu 2 142 -1 731 191 5 53 chr10 8388799 8388987 -137200301 - MER53 DNA DNA 0 189 11 30 0 0 0 chr10 8389116 8389146 -137200142 + AT_rich Low_complexity Low_complexity 1 30 0 686 203 16 0 chr10 8389146 8389269 -137200019 - FLAM_C SINE Alu -17 126 2 979 178 0 0 chr10 8389461 8389613 -137199675 + FRAM SINE Alu 5 156 -10 284 313 0 0 chr10 8389881 8389945 -137199343 + (CACG)n Simple_repeat Simple_repeat 4 67 0 240 86 0 0 chr10 8389946 8389981 -137199307 + (TC)n Simple_repeat Simple_repeat 1 35 0 524 320 50 11 chr10 8390653 8390934 -137198354 + L1ME4a LINE L1 5625 5916 -205 319 254 66 16 chr10 8391062 8391184 -137198104 + L1ME4a LINE L1 5985 6112 -9 1314 107 11 0 chr10 8391451 8391628 -137197660 + AluSq SINE Alu 1 179 -134 388 133 0 0 chr10 8391628 8391688 -137197600 - AluS SINE Alu -243 60 1 2275 78 10 0 chr10 8392291 8392585 -137196703 - AluY SINE Alu -14 297 1 2331 106 3 0 chr10 8392804 8393106 -137196182 + AluSx SINE Alu 1 303 -9 2228 105 0 3 chr10 8393292 8393587 -137195701 + AluSg SINE Alu 8 301 -9 993 172 0 22 chr10 8393608 8393788 -137195500 - L1MC1 LINE L1 -190 6143 5968 887 114 0 0 chr10 8393788 8393902 -137195386 - AluJo SINE Alu -20 292 179 762 185 8 0 chr10 8393902 8394032 -137195256 - AluJo SINE Alu -180 132 2 4087 153 3 16 chr10 8394034 8394727 -137194561 - L1MC1 LINE L1 -358 5975 5292 862 146 8 0 chr10 8395668 8395798 -137193490 - FLAM_C SINE Alu -2 131 1 216 0 0 0 chr10 8396184 8396208 -137193080 + (TTTAA)n Simple_repeat Simple_repeat 5 28 0 1774 54 27 0 chr10 8396208 8396429 -137192859 - L1PA10 LINE L1 -22 6146 5920 21 0 0 0 chr10 8396465 8396486 -137192802 + AT_rich Low_complexity Low_complexity 1 21 0 1527 196 13 16 chr10 8397081 8397387 -137191901 + AluJo SINE Alu 1 305 -7 2263 92 0 0 chr10 8397652 8397935 -137191353 - AluSg SINE Alu -27 283 1 801 115 0 54 chr10 8398995 8399125 -137190163 + FLAM_C SINE Alu 5 127 -6 1163 155 116 60 chr10 8399163 8399447 -137189841 + AluSp SINE Alu 1 300 -3 276 139 23 0 chr10 8399449 8399492 -137189796 + AluJ/F(R)AM SINE Alu 168 211 -91 1336 96 0 0 chr10 8399524 8399691 -137189597 + AluSg/x SINE Alu 132 298 -12 391 159 0 0 chr10 8400718 8400787 -137188501 - L1M LINE L1 -984 5360 5292 199 191 95 0 chr10 8401791 8401833 -137187455 + L2 LINE L2 3175 3220 -52 265 174 0 0 chr10 8402107 8402153 -137187135 - L1MC/D LINE L1 -1934 5851 5806 237 133 61 20 chr10 8402160 8402258 -137187030 + (TCTA)n Simple_repeat Simple_repeat 1 102 0 507 252 35 0 chr10 8402535 8402650 -137186638 + LTR67 LTR ERVL 399 517 -40 2560 118 74 22 chr10 8404275 8404682 -137184606 - MSTA LTR MaLR 0 428 1 270 0 0 0 chr10 8405232 8405262 -137184026 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 2142 111 40 7 chr10 8407110 8407408 -137181880 - AluSc SINE Alu -1 308 1 3887 76 38 0 chr10 8408753 8409253 -137180035 + L1PA13 LINE L1 5642 6160 -3 1112 257 40 81 chr10 8409333 8409516 -137179772 + L2 LINE L2 1997 2186 -1128 2186 131 0 0 chr10 8409516 8409814 -137179474 - AluSx SINE Alu -14 298 1 1112 257 40 81 chr10 8409814 8410101 -137179187 + L2 LINE L2 2186 2448 -866 959 276 99 14 chr10 8410104 8410456 -137178832 + L2 LINE L2 2238 2619 -695 1740 146 46 4 chr10 8410527 8410807 -137178481 - AluJb SINE Alu -20 292 1 478 319 13 4 chr10 8410832 8411064 -137178224 - L1M4 LINE L1 -943 5186 4953 * 1218 288 59 48 chr10 8411060 8411699 -137177589 - L1MEd LINE L1 -3270 2859 2225 2303 140 28 8 chr10 8411699 8412056 -137177232 - THE1B LTR MaLR 0 364 1 1218 288 59 48 chr10 8412056 8412254 -137177034 - L1MEd LINE L1 -3904 2225 2031 935 254 68 66 chr10 8412509 8413519 -137175769 - L1MEd LINE L1 -4646 1664 604 221 172 16 0 chr10 8414002 8414066 -137175222 + (TA)n Simple_repeat Simple_repeat 1 65 0 261 0 0 0 chr10 8414071 8414100 -137175188 + (TG)n Simple_repeat Simple_repeat 2 30 0 245 276 63 87 chr10 8414179 8414306 -137174982 - L2 LINE L2 -15 3257 3134 1816 168 3 3 chr10 8414323 8414615 -137174673 - AluJo SINE Alu -20 292 1 345 129 0 0 chr10 8414977 8415047 -137174241 + (TG)n Simple_repeat Simple_repeat 1 70 0 1152 247 57 46 chr10 8415047 8415436 -137173852 - MLT2C2 LTR ERVL -71 393 1 1054 164 0 23 chr10 8415697 8415868 -137173420 + AluJb SINE Alu 121 287 -25 213 39 0 0 chr10 8415873 8415899 -137173389 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 876 195 197 82 chr10 8416026 8416506 -137172782 + MLT1F1 LTR MaLR 1 565 -2 407 240 0 8 chr10 8416843 8416951 -137172337 + (CA)n Simple_repeat Simple_repeat 2 110 -11 1858 157 7 7 chr10 8416951 8417245 -137172043 - AluSx SINE Alu -18 294 1 407 240 0 8 chr10 8417245 8417257 -137172031 + (CA)n Simple_repeat Simple_repeat 110 121 0 219 295 66 0 chr10 8417274 8417335 -137171953 - MER91A DNA MER1_type -3 193 129 581 310 38 0 chr10 8417401 8417559 -137171729 - MER91A DNA MER1_type -20 176 13 1722 171 17 0 chr10 8419403 8419696 -137169592 + AluJo SINE Alu 1 298 -14 2000 155 0 10 chr10 8419756 8420066 -137169222 - AluSx SINE Alu -5 307 1 180 77 0 0 chr10 8420092 8420118 -137169170 + (CA)n Simple_repeat Simple_repeat 1 26 0 1850 167 0 7 chr10 8420993 8421293 -137167995 + AluJo SINE Alu 1 298 -14 2178 124 0 0 chr10 8421432 8421731 -137167557 - AluSq SINE Alu -14 299 1 1592 170 12 8 chr10 8421818 8422077 -137167211 - AluJo SINE Alu -52 260 1 198 0 0 0 chr10 8422262 8422284 -137167004 + (TA)n Simple_repeat Simple_repeat 2 23 0 1926 137 0 14 chr10 8422933 8423217 -137166071 + AluSc SINE Alu 1 280 -29 317 361 16 0 chr10 8423396 8423518 -137165770 - MIR3 SINE MIR -38 170 47 1995 92 8 0 chr10 8423678 8423940 -137165348 - L1PA10 LINE L1 -12 6156 5893 5163 71 3 3 chr10 8424263 8424895 -137164393 - L1PA10 LINE L1 -12 6156 5525 350 308 47 35 chr10 8426416 8426588 -137162700 + MIR3 SINE MIR 17 190 -18 290 292 10 10 chr10 8427042 8427138 -137162150 + MER103 DNA DNA 37 132 -34 331 266 105 21 chr10 8427222 8427365 -137161923 + L1M4 LINE L1 5075 5229 -917 361 296 108 11 chr10 8428962 8429138 -137160150 - MIR SINE MIR -23 239 47 2090 94 0 4 chr10 8429143 8429410 -137159878 + AluSx SINE Alu 36 301 -11 340 318 162 1 chr10 8429728 8429887 -137159401 - MIR SINE MIR -70 138 14 248 216 20 0 chr10 8429885 8429936 -137159352 + L2 LINE L2 3262 3313 0 * 1753 179 7 0 chr10 8429976 8430267 -137159021 - AluSx SINE Alu -18 294 2 1901 154 0 7 chr10 8430336 8430634 -137158654 + AluJo SINE Alu 17 312 0 1527 190 30 23 chr10 8431272 8431577 -137157711 - AluJb SINE Alu -5 307 1 258 347 24 45 chr10 8432227 8432371 -137156917 + MIR3 SINE MIR 40 181 -27 253 182 23 0 chr10 8432454 8432498 -137156790 - MER57A LTR ERV1 -64 339 295 216 348 90 23 chr10 8432911 8433210 -137156078 - L2 LINE L2 -340 2974 2656 1066 145 60 20 chr10 8433214 8433247 -137156041 + AluSg/x SINE Alu 86 116 -193 1884 84 0 8 chr10 8433247 8433512 -137155776 + AluSq SINE Alu 51 313 0 1066 145 60 20 chr10 8433512 8433677 -137155611 + AluSg/x SINE Alu 116 293 -16 381 328 85 48 chr10 8433783 8434076 -137155212 - L2 LINE L2 -862 2452 2149 220 312 50 50 chr10 8434439 8434580 -137154708 - L2 LINE L2 -1635 1679 1539 1422 168 45 63 chr10 8434681 8435020 -137154268 + AluJb SINE Alu 1 334 0 743 144 0 0 chr10 8435208 8435312 -137153976 + FRAM SINE Alu 49 152 -24 209 338 54 0 chr10 8435326 8435400 -137153888 - L2 LINE L2 -2 3311 3234 334 321 3 8 chr10 8435532 8435653 -137153635 + MIR SINE MIR 51 170 -62 1956 133 85 20 chr10 8435675 8436027 -137153261 + THE1C LTR MaLR 1 375 0 195 139 0 0 chr10 8436347 8436383 -137152905 + (TTCA)n Simple_repeat Simple_repeat 4 39 0 1786 187 0 13 chr10 8436488 8436804 -137152484 + AluJo SINE Alu 1 312 0 497 272 69 13 chr10 8436968 8437186 -137152102 - MIR SINE MIR -13 249 19 1691 120 0 154 chr10 8437275 8437632 -137151656 - AluJb SINE Alu -10 302 1 757 229 67 48 chr10 8437734 8438048 -137151240 + L1MC5 LINE L1 7631 7950 -11 324 336 49 8 chr10 8438230 8438352 -137150936 + MIR3 SINE MIR 74 200 -8 1729 142 26 8 chr10 8439153 8439450 -137149838 + AluJo SINE Alu 12 313 0 1109 159 17 0 chr10 8439846 8440022 -137149266 - AluJ SINE Alu 0 312 134 2077 118 4 0 chr10 8440022 8440302 -137148986 - AluSx SINE Alu -13 299 19 1824 112 20 58 chr10 8440536 8440857 -137148431 - AluSx SINE Alu 0 310 1 318 167 0 0 chr10 8440875 8440935 -137148353 + CT-rich Low_complexity Low_complexity 2 61 0 904 153 8 0 chr10 8440935 8441066 -137148222 - AluJ SINE Alu -169 133 2 1488 171 3 49 chr10 8441461 8441747 -137147541 - AluJb SINE Alu -39 273 1 26 30 0 0 chr10 8441754 8441787 -137147501 + AT_rich Low_complexity Low_complexity 1 33 0 833 163 8 0 chr10 8441789 8441912 -137147376 - FLAM_C SINE Alu -18 125 2 853 299 68 35 chr10 8442057 8442575 -137146713 + L1ME4a LINE L1 5392 5926 -195 2034 136 7 3 chr10 8442700 8442994 -137146294 + AluSx SINE Alu 1 295 -17 2363 96 3 0 chr10 8443073 8443376 -137145912 + AluSp SINE Alu 1 304 -9 204 274 71 12 chr10 8443655 8443739 -137145549 - MIR SINE MIR -111 151 63 491 164 4 246 chr10 8444257 8444345 -137144943 - MER5A DNA MER1_type -13 176 176 1991 101 19 0 chr10 8444345 8444613 -137144675 - AluSx SINE Alu -18 294 22 491 164 4 246 chr10 8444613 8444756 -137144532 - MER5A DNA MER1_type -12 177 1 211 85 43 0 chr10 8445127 8445174 -137144114 + (TA)n Simple_repeat Simple_repeat 1 49 0 25 0 0 0 chr10 8445174 8445199 -137144089 + AT_rich Low_complexity Low_complexity 1 25 0 204 314 0 0 chr10 8445579 8445630 -137143658 + L3 LINE CR1 1516 1566 -11 2193 109 0 3 chr10 8445689 8445983 -137143305 + AluSq SINE Alu 5 297 -16 21 0 0 0 chr10 8446204 8446225 -137143063 + AT_rich Low_complexity Low_complexity 1 21 0 4698 123 11 32 chr10 8446605 8446863 -137142425 - L1PB4 LINE L1 0 6156 5894 2102 133 0 0 chr10 8446863 8447157 -137142131 - AluY SINE Alu -17 294 1 4698 123 11 32 chr10 8447157 8447680 -137141608 - L1PB4 LINE L1 -262 5894 5391 260 307 23 0 chr10 8448098 8448186 -137141102 + GA-rich Low_complexity Low_complexity 1 90 0 22 0 0 0 chr10 8448609 8448631 -137140657 + AT_rich Low_complexity Low_complexity 1 22 0 1603 205 0 7 chr10 8448747 8449049 -137140239 + AluJo SINE Alu 2 301 -11 1975 137 13 10 chr10 8449920 8450227 -137139061 + AluSx SINE Alu 5 312 0 222 218 0 0 chr10 8450252 8450307 -137138981 + A-rich Low_complexity Low_complexity 1 55 0 766 156 0 71 chr10 8450603 8450744 -137138544 + FLAM_C SINE Alu 1 131 -2 1337 198 41 36 chr10 8450801 8451250 -137138038 - Charlie1b DNA MER1_type 0 523 1 2449 88 0 0 chr10 8452031 8452336 -137136952 - AluSc SINE Alu -4 305 1 287 318 86 75 chr10 8452702 8452982 -137136306 - L2 LINE L2 -5 3267 2985 446 279 89 26 chr10 8453049 8453239 -137136049 - MLT1K LTR MaLR -9 579 378 875 201 0 0 chr10 8455074 8455223 -137134065 - FRAM SINE Alu -26 150 2 624 266 110 17 chr10 8455227 8455464 -137133824 + MER112 DNA MER1_type 1 259 -1 1197 147 0 26 chr10 8456173 8456363 -137132925 + AluJo SINE Alu 84 268 -44 240 287 50 88 chr10 8456570 8456664 -137132624 + MLT1L LTR MaLR 367 452 -163 1712 181 0 10 chr10 8456664 8456957 -137132331 + AluJo SINE Alu 5 294 -18 240 287 50 88 chr10 8456957 8457043 -137132245 + MLT1L LTR MaLR 452 540 -75 483 173 0 0 chr10 8457068 8457178 -137132110 + CT-rich Low_complexity Low_complexity 2 111 0 1847 126 69 0 chr10 8457178 8457440 -137131848 - AluSx SINE Alu -32 280 1 1969 155 7 3 chr10 8457974 8458284 -137131004 - AluJo SINE Alu -1 311 1 823 174 83 53 chr10 8458515 8458662 -137130626 - MER33 DNA MER1_type -2261 324 163 1832 166 0 4 chr10 8458662 8458962 -137130326 + AluSx SINE Alu 9 307 0 823 174 83 53 chr10 8458962 8459077 -137130211 - MER33 DNA MER1_type -2422 163 53 281 85 34 0 chr10 8459415 8459650 -137129638 + CT-rich Low_complexity Low_complexity 1 180 0 1945 157 3 25 chr10 8459650 8459969 -137129319 - AluSq SINE Alu 0 547 1 213 232 189 63 chr10 8459981 8460076 -137129212 + MIR SINE MIR 74 180 -82 186 233 123 55 chr10 8460104 8460177 -137129111 + L2 LINE L2 3129 3206 -66 909 46 0 0 chr10 8461023 8461131 -137128157 + L1MA1 LINE L1 6195 6302 0 189 0 81 27 chr10 8461179 8461216 -137128072 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 3135 60 34 0 chr10 8461216 8461597 -137127691 - L1PA8 LINE L1 -17 6155 5762 907 142 7 13 chr10 8461604 8461759 -137127529 + L1MA9 LINE L1 6159 6312 0 364 268 121 19 chr10 8462366 8462523 -137126765 - MIR SINE MIR -67 195 23 272 293 24 12 chr10 8462661 8462743 -137126545 + L2 LINE L2 3227 3309 -4 1611 183 23 17 chr10 8462751 8463051 -137126237 + AluJb SINE Alu 11 312 0 217 163 23 0 chr10 8463457 8463500 -137125788 + A-rich Low_complexity Low_complexity 5 48 0 1761 203 7 0 chr10 8463719 8464029 -137125259 + AluJo SINE Alu 1 312 0 2181 124 0 3 chr10 8464280 8464587 -137124701 + AluSq SINE Alu 1 306 -7 285 262 39 29 chr10 8464877 8464980 -137124308 + MIR SINE MIR 73 176 -86 209 270 108 14 chr10 8465078 8465152 -137124136 + MIR SINE MIR 178 258 -4 1627 145 16 4 chr10 8465534 8465789 -137123499 - AluJo SINE Alu -15 297 40 2212 124 0 10 chr10 8466208 8466515 -137122773 - AluSx SINE Alu -8 304 1 357 43 0 0 chr10 8467236 8467283 -137122005 + (CA)n Simple_repeat Simple_repeat 1 47 0 1799 187 0 13 chr10 8469249 8469564 -137119724 - AluJo SINE Alu -1 311 1 353 266 19 19 chr10 8470674 8470835 -137118453 - MIR SINE MIR -63 145 8 220 214 71 18 chr10 8470993 8471049 -137118239 - MIR SINE MIR -96 166 108 2131 139 0 0 chr10 8471304 8471598 -137117690 + AluSx SINE Alu 1 294 -18 868 172 0 0 chr10 8471763 8471891 -137117397 - FLAM_A SINE Alu -5 128 1 1724 179 3 13 chr10 8473030 8473343 -137115945 + AluJo SINE Alu 1 310 -2 1942 173 0 3 chr10 8473377 8473689 -137115599 + AluSx SINE Alu 1 311 -1 534 298 41 1 chr10 8473712 8473881 -137115407 - MIR SINE MIR -31 177 46 230 311 56 0 chr10 8473916 8474006 -137115282 + MIR SINE MIR 168 262 0 23 68 0 0 chr10 8474102 8474146 -137115142 + AT_rich Low_complexity Low_complexity 1 44 0 843 127 8 8 chr10 8474146 8474264 -137115024 - FLAM_C SINE Alu -15 118 1 2247 108 3 0 chr10 8475982 8476287 -137113001 + AluSg1 SINE Alu 1 306 -3 318 328 88 37 chr10 8478698 8479106 -137110182 - L2 LINE L2 -8 3264 2836 268 291 12 0 chr10 8479106 8479192 -137110096 + (CGGGG)n Simple_repeat Simple_repeat 4 90 0 21 36 0 0 chr10 8479542 8479570 -137109718 + AT_rich Low_complexity Low_complexity 1 28 0 342 295 45 0 chr10 8479598 8479710 -137109578 - MIR SINE MIR 0 262 146 1778 170 10 10 chr10 8479751 8480051 -137109237 - AluJo SINE Alu -12 300 1 22 0 0 0 chr10 8481505 8481527 -137107761 + AT_rich Low_complexity Low_complexity 1 22 0 562 223 69 23 chr10 8481758 8481933 -137107355 + MIR SINE MIR 34 216 -46 240 292 167 0 chr10 8482828 8482900 -137106388 + MER5A DNA MER1_type 2 85 -104 1893 143 7 0 chr10 8483343 8483623 -137105665 - AluJo SINE Alu -26 286 5 217 318 16 16 chr10 8484493 8484556 -137104732 - MIR SINE MIR -116 146 84 965 196 4 94 chr10 8484647 8484882 -137104406 - MER20 DNA MER1_type -4 215 2 702 167 25 8 chr10 8484997 8485117 -137104171 + FLAM_A SINE Alu 2 123 -10 345 309 12 0 chr10 8486193 8486355 -137102933 + (TA)n Simple_repeat Simple_repeat 2 165 0 302 313 0 0 chr10 8486363 8486446 -137102842 + L1MC4 LINE L1 6614 6696 -1346 803 143 0 8 chr10 8486446 8486565 -137102723 - FLAM_C SINE Alu -24 119 2 1988 228 49 62 chr10 8486685 8487312 -137101976 - L1ME1 LINE L1 -6 6160 5542 1977 117 46 0 chr10 8487905 8488188 -137101100 - AluSx SINE Alu -15 297 2 188 67 33 0 chr10 8488676 8488706 -137100582 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 915 180 25 0 chr10 8489229 8489390 -137099898 - MER5A DNA MER1_type -24 165 1 260 286 8 92 chr10 8489437 8489493 -137099795 - MIR3 SINE MIR 0 208 166 1193 187 22 40 chr10 8489493 8489718 -137099570 - MER58A DNA MER1_type 0 224 4 260 286 8 92 chr10 8489718 8489780 -137099508 - MIR3 SINE MIR -42 166 100 1191 216 69 79 chr10 8489882 8489895 -137099393 - MLT1F1 LTR MaLR 0 559 547 2378 150 8 35 chr10 8489895 8490296 -137098992 - MLT1B LTR MaLR 0 390 1 1191 216 69 79 chr10 8490296 8490823 -137098465 - MLT1F1 LTR MaLR -12 547 6 717 148 10 0 chr10 8491013 8491114 -137098174 + L1PB4 LINE L1 6039 6140 -16 23 54 0 0 chr10 8491640 8491677 -137097611 + AT_rich Low_complexity Low_complexity 1 37 0 1166 137 103 29 chr10 8491729 8491933 -137097355 + MER20 DNA MER1_type 1 219 0 294 247 132 63 chr10 8492324 8492473 -137096815 - L1ME4a LINE L1 -9 6112 5946 1711 221 152 47 chr10 8492473 8493011 -137096277 + MLT1G1 LTR MaLR 1 595 0 294 247 132 63 chr10 8493011 8493051 -137096237 - L1ME4a LINE L1 -175 5946 5910 290 254 119 51 chr10 8493813 8493931 -137095357 - L2 LINE L2 -1 3312 3187 395 299 160 0 chr10 8494183 8494327 -137094961 + MIR3 SINE MIR 36 202 -6 213 212 53 0 chr10 8494705 8494818 -137094470 + (TA)n Simple_repeat Simple_repeat 1 119 0 255 175 0 0 chr10 8495187 8495244 -137094044 + (TA)n Simple_repeat Simple_repeat 2 58 0 1541 185 58 102 chr10 8496039 8496520 -137092768 + MLT2C2 LTR ERVL 1 460 -4 248 200 31 31 chr10 8496942 8497007 -137092281 + L2 LINE L2 3249 3313 0 490 113 0 72 chr10 8497546 8497740 -137091548 + (TA)n Simple_repeat Simple_repeat 1 180 0 257 208 0 0 chr10 8497742 8497795 -137091493 + GA-rich Low_complexity Low_complexity 1 53 0 1161 68 17 11 chr10 8498460 8498637 -137090651 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 480 208 94 0 chr10 8500537 8500643 -137088645 + MER5A DNA MER1_type 74 189 0 1522 196 0 7 chr10 8500751 8501021 -137088267 - AluJb SINE Alu -44 268 1 700 212 26 36 chr10 8501083 8501276 -137088012 - MLT1J LTR MaLR 0 511 321 875 220 49 52 chr10 8501286 8501734 -137087554 - MLT1D LTR MaLR -6 499 26 679 273 89 25 chr10 8501749 8502075 -137087213 - MLT1J LTR MaLR -164 347 1 1825 158 27 3 chr10 8502282 8502574 -137086714 - AluJo SINE Alu -13 299 1 216 0 0 0 chr10 8502955 8502979 -137086309 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 199 143 29 0 chr10 8503522 8503557 -137085731 - MIR SINE MIR -65 197 162 354 271 69 7 chr10 8504353 8504497 -137084791 - L1ME4a LINE L1 -1 6120 5968 183 271 21 21 chr10 8504675 8504723 -137084565 + L2 LINE L2 3213 3260 -12 398 339 23 28 chr10 8504829 8505006 -137084282 - MIR SINE MIR -74 188 13 3956 127 30 6 chr10 8505490 8506130 -137083158 + L1PA16 LINE L1 5503 6157 -9 279 203 0 0 chr10 8506131 8506195 -137083093 + (TA)n Simple_repeat Simple_repeat 1 64 0 317 286 0 38 chr10 8506206 8506311 -137082977 - L1MC4 LINE L1 -1337 6705 6605 2088 125 7 0 chr10 8506947 8507236 -137082052 + AluSp SINE Alu 14 304 -9 853 263 50 118 chr10 8507740 8508276 -137081012 + L2 LINE L2 2813 3312 -1 21 0 0 0 chr10 8509068 8509089 -137080199 + AT_rich Low_complexity Low_complexity 1 21 0 1656 173 69 0 chr10 8510395 8510730 -137078558 - MER47A DNA MER2_type -1 365 8 2006 125 7 14 chr10 8510953 8511249 -137078039 + AluSx SINE Alu 1 294 -18 320 267 149 37 chr10 8511560 8511721 -137077567 + L2 LINE L2 3122 3300 -13 487 107 82 2 chr10 8511725 8512212 -137077076 + (TA)n Simple_repeat Simple_repeat 1 526 0 34 24 0 0 chr10 8512212 8512253 -137077035 + AT_rich Low_complexity Low_complexity 1 41 0 360 106 93 0 chr10 8512259 8512420 -137076868 + (TA)n Simple_repeat Simple_repeat 1 176 0 37 52 0 0 chr10 8512420 8512478 -137076810 + AT_rich Low_complexity Low_complexity 1 58 0 478 141 0 116 chr10 8512596 8512649 -137076639 - MER33 DNA MER1_type -2476 109 76 2171 127 0 0 chr10 8512649 8512949 -137076339 - AluSx SINE Alu -12 300 1 478 141 0 116 chr10 8512949 8513016 -137076272 - MER33 DNA MER1_type -2509 76 3 1191 26 28 26 chr10 8514286 8514528 -137074760 + (TTTC)n Simple_repeat Simple_repeat 2 423 0 1105 173 0 11 chr10 8514532 8514717 -137074571 - AluSq SINE Alu -13 300 118 245 306 294 8 chr10 8516546 8516791 -137072497 + L3 LINE CR1 1138 1452 -125 262 300 130 63 chr10 8516832 8517179 -137072109 - L2 LINE L2 -36 3236 2867 754 178 0 15 chr10 8517571 8517706 -137071582 - AluJb SINE Alu -179 133 1 22 70 0 0 chr10 8518259 8518302 -137070986 + AT_rich Low_complexity Low_complexity 1 43 0 25 65 0 0 chr10 8518346 8518392 -137070896 + AT_rich Low_complexity Low_complexity 1 46 0 1890 141 21 3 chr10 8519012 8519296 -137069992 + AluJb SINE Alu 1 289 -23 284 91 80 0 chr10 8519296 8519384 -137069904 + (TA)n Simple_repeat Simple_repeat 2 96 0 301 261 57 0 chr10 8519386 8519474 -137069814 - L1MC4 LINE L1 -1337 6705 6613 656 112 49 14 chr10 8519474 8519825 -137069463 + (TA)n Simple_repeat Simple_repeat 1 363 0 391 128 64 6 chr10 8519861 8520017 -137069271 + (TA)n Simple_repeat Simple_repeat 1 165 0 699 132 7 44 chr10 8520138 8520274 -137069014 - LTR9 LTR ERV1 -481 131 1 386 259 175 21 chr10 8521879 8522022 -137067266 - MIR3 SINE MIR -27 181 17 448 130 13 0 chr10 8522204 8522281 -137067007 + MADE1 DNA Mariner 3 80 0 2200 110 0 0 chr10 8522347 8522638 -137066650 - AluSq SINE Alu -18 295 5 556 319 40 22 chr10 8523227 8523453 -137065835 - MIR SINE MIR 0 262 33 835 216 0 55 chr10 8523510 8523728 -137065560 + MER3 DNA MER1_type 2 207 -2 405 176 28 9 chr10 8523868 8523976 -137065312 + GA-rich Low_complexity Low_complexity 4 113 0 2277 108 7 0 chr10 8524192 8524497 -137064791 + AluSx SINE Alu 1 307 -5 186 338 125 22 chr10 8524698 8524834 -137064454 - MIR3 SINE MIR -24 184 35 305 276 243 17 chr10 8526671 8526852 -137062436 + MIR SINE MIR 4 225 -37 234 91 0 0 chr10 8528183 8528216 -137061072 + (T)n Simple_repeat Simple_repeat 1 33 0 448 274 9 9 chr10 8528615 8528721 -137060567 + L2 LINE L2 3208 3313 0 5413 22 5 2 chr10 8529729 8530365 -137058923 + L1PA4 LINE L1 5516 6153 -2 207 167 0 0 chr10 8530688 8530724 -137058564 + (TTG)n Simple_repeat Simple_repeat 1 36 0 2405 76 0 16 chr10 8531161 8531477 -137057811 + AluSx SINE Alu 1 311 -1 195 338 0 25 chr10 8532083 8532163 -137057125 + MIR SINE MIR 65 142 -66 453 81 0 0 chr10 8534157 8534219 -137055069 + (TCCA)n Simple_repeat Simple_repeat 1 62 0 988 272 25 0 chr10 8535315 8535558 -137053730 - MIR SINE MIR -11 251 3 662 249 83 50 chr10 8536013 8536254 -137053034 - MIR SINE MIR -10 252 4 3082 170 45 5 chr10 8536386 8537063 -137052225 - MER39 LTR ERV1 -3 639 1 27 62 0 0 chr10 8537576 8537624 -137051664 + AT_rich Low_complexity Low_complexity 1 48 0 23 0 0 0 chr10 8537712 8537735 -137051553 + AT_rich Low_complexity Low_complexity 1 23 0 201 293 183 0 chr10 8537795 8537877 -137051411 - MER5C DNA MER1_type 0 324 228 183 156 0 0 chr10 8537890 8537922 -137051366 - MER5C DNA MER1_type -201 123 92 346 334 39 55 chr10 8538517 8538825 -137050463 + L1ME4a LINE L1 5582 5884 -237 228 269 182 50 chr10 8539022 8539264 -137050024 + LTR33A LTR ERVL 229 502 -21 302 225 12 0 chr10 8539266 8539346 -137049942 + CT-rich Low_complexity Low_complexity 1 81 0 474 198 32 0 chr10 8539383 8539509 -137049779 + CT-rich Low_complexity Low_complexity 2 131 0 1045 238 13 36 chr10 8539859 8540161 -137049127 + MLT1F LTR MaLR 43 337 -205 1688 171 50 26 chr10 8540188 8540567 -137048721 - MER39 LTR ERV1 -1 706 319 555 56 0 0 chr10 8540814 8540885 -137048403 + (TTCC)n Simple_repeat Simple_repeat 4 74 0 331 169 23 0 chr10 8540913 8540998 -137048290 - MER39 LTR ERV1 -311 358 255 225 0 0 0 chr10 8541013 8541038 -137048250 + (TTCC)n Simple_repeat Simple_repeat 4 28 0 186 71 0 0 chr10 8541080 8541108 -137048180 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 691 127 24 0 chr10 8541109 8541235 -137048053 + CT-rich Low_complexity Low_complexity 4 132 0 228 100 0 0 chr10 8541236 8541276 -137048012 + (TCTCTG)n Simple_repeat Simple_repeat 3 42 0 1797 185 7 0 chr10 8541287 8541579 -137047709 - AluJb SINE Alu -16 296 3 1522 142 83 0 chr10 8541580 8541868 -137047420 - MER39 LTR ERV1 -394 313 2 520 214 7 62 chr10 8541868 8542004 -137047284 + MLT1F LTR MaLR 405 532 -35 892 106 159 33 chr10 8542159 8542310 -137046978 - AluSg/x SINE Alu -7 303 134 2424 73 0 0 chr10 8544306 8544608 -137044680 - AluY SINE Alu -9 302 1 231 341 79 5 chr10 8546495 8546677 -137042611 + MIR3 SINE MIR 12 207 -1 1386 173 11 50 chr10 8547602 8547995 -137041293 - AluJo SINE Alu 0 419 38 1258 277 106 30 chr10 8548042 8548658 -137040630 + HAL1 LINE L1 1629 2323 -184 821 172 0 8 chr10 8548658 8548792 -137040496 + FLAM_C SINE Alu 1 133 0 1258 277 106 30 chr10 8548792 8548986 -137040302 + HAL1 LINE L1 2323 2501 -6 309 238 148 10 chr10 8549360 8549461 -137039827 + L2 LINE L2 3199 3313 0 324 353 154 0 chr10 8549528 8549820 -137039468 + L2 LINE L2 2638 2974 -340 372 164 0 0 chr10 8550288 8550355 -137038933 + (CA)n Simple_repeat Simple_repeat 1 67 0 337 260 182 39 chr10 8551459 8551613 -137037675 - MIR SINE MIR -86 176 1 318 321 21 86 chr10 8551682 8551728 -137037560 + L2 LINE L2 3142 3189 -83 2142 130 0 3 chr10 8551728 8552029 -137037259 + AluSx SINE Alu 1 300 -12 318 321 21 86 chr10 8552029 8552122 -137037166 + L2 LINE L2 3189 3272 0 538 257 39 56 chr10 8552990 8553169 -137036119 - MIR3 SINE MIR -32 176 1 28 86 0 0 chr10 8553321 8553391 -137035897 + AT_rich Low_complexity Low_complexity 1 70 0 1993 129 0 4 chr10 8553677 8553957 -137035331 + AluSx SINE Alu 1 279 -33 23 0 0 0 chr10 8553997 8554020 -137035268 + AT_rich Low_complexity Low_complexity 1 23 0 819 252 166 19 chr10 8554022 8554383 -137034905 + MLT1J LTR MaLR 98 511 0 282 56 0 0 chr10 8555527 8555563 -137033725 + (TG)n Simple_repeat Simple_repeat 2 37 0 223 265 0 0 chr10 8557175 8557224 -137032064 + (CA)n Simple_repeat Simple_repeat 2 50 0 1963 139 137 11 chr10 8560283 8560663 -137028625 - MSTA LTR MaLR 0 428 1 1782 153 14 14 chr10 8561007 8561319 -137027969 - AluJo SINE Alu 0 312 1 516 206 28 153 chr10 8561473 8561799 -137027489 - L1M4 LINE L1 -1484 4662 4378 428 267 121 11 chr10 8561834 8562107 -137027181 - L1M4 LINE L1 -2465 3681 3379 3673 32 0 0 chr10 8562116 8562551 -137026737 - L1PA3 LINE L1 -5 6150 5716 243 278 156 18 chr10 8563306 8563420 -137025868 - MIR SINE MIR -41 167 35 2026 133 30 0 chr10 8563727 8564028 -137025260 - AluSx SINE Alu -2 310 1 1254 136 166 2 chr10 8564279 8564707 -137024581 - L1PA13 LINE L1 -11 6152 5658 201 333 100 33 chr10 8564842 8564962 -137024326 + L2 LINE L2 3136 3263 -9 363 44 0 0 chr10 8569183 8569228 -137020060 + (CA)n Simple_repeat Simple_repeat 1 45 0 1772 184 0 16 chr10 8571190 8571506 -137017782 - AluJo SINE Alu 0 312 2 181 338 75 12 chr10 8572983 8573063 -137016225 - MIR SINE MIR -163 99 15 365 243 68 79 chr10 8573100 8573277 -137016011 + MIR SINE MIR 33 207 -55 252 0 0 0 chr10 8574233 8574261 -137015027 + (TG)n Simple_repeat Simple_repeat 2 29 0 78 0 0 0 chr10 8574261 8574339 -137014949 + AT_rich Low_complexity Low_complexity 1 78 0 319 236 47 39 chr10 8574339 8574466 -137014822 - L1M4 LINE L1 -2912 3234 3107 52 0 0 0 chr10 8574475 8574527 -137014761 + AT_rich Low_complexity Low_complexity 1 52 0 260 177 35 35 chr10 8574527 8574640 -137014648 + (TATAA)n Simple_repeat Simple_repeat 1 113 0 198 91 55 18 chr10 8574645 8574700 -137014588 + A-rich Low_complexity Low_complexity 2 58 0 296 300 76 57 chr10 8574824 8575034 -137014254 - L2 LINE L2 -3071 243 30 3801 161 85 5 chr10 8576561 8576680 -137012608 - L1MA10 LINE L1 -39 6295 6187 465 19 0 0 chr10 8576680 8576734 -137012554 + (TTTTA)n Simple_repeat Simple_repeat 2 55 0 3801 161 85 5 chr10 8576734 8577367 -137011921 - L1MA10 LINE L1 -147 6187 5483 1834 117 12 4 chr10 8577417 8577666 -137011622 + AluSc SINE Alu 7 257 -52 1087 248 193 39 chr10 8577770 8578287 -137011001 - L2 LINE L2 -2482 832 236 2167 103 6 13 chr10 8578287 8578599 -137010689 + AluSg SINE Alu 1 310 0 420 37 0 0 chr10 8579538 8579592 -137009696 + (CA)n Simple_repeat Simple_repeat 2 55 0 346 188 21 21 chr10 8580399 8580495 -137008793 + CT-rich Low_complexity Low_complexity 1 96 0 261 139 0 0 chr10 8580488 8580531 -137008757 + (TCTCC)n Simple_repeat Simple_repeat 1 43 0 * 391 273 327 0 chr10 8580663 8580828 -137008460 - MIR SINE MIR -26 236 18 319 282 129 29 chr10 8581078 8581248 -137008040 - MIR SINE MIR -45 217 31 1368 143 0 66 chr10 8581662 8581906 -137007382 + AluJo SINE Alu 40 267 -45 217 216 0 0 chr10 8582055 8582092 -137007196 + polypyrimidine Low_complexity Low_complexity 3 39 0 377 182 20 27 chr10 8582099 8582247 -137007041 + (TA)n Simple_repeat Simple_repeat 2 148 0 25 0 0 0 chr10 8582413 8582438 -137006850 + AT_rich Low_complexity Low_complexity 1 25 0 1283 141 13 0 chr10 8582907 8583134 -137006154 - L1MB1 LINE L1 -34 6155 5926 473 145 0 0 chr10 8583135 8583218 -137006070 + L1M3 LINE L1 5570 5652 -516 2592 43 0 0 chr10 8583606 8583909 -137005379 + AluY SINE Alu 2 304 -7 575 259 25 37 chr10 8584429 8584591 -137004697 + MIR3 SINE MIR 46 205 -3 215 143 0 18 chr10 8584815 8584871 -137004417 + (TA)n Simple_repeat Simple_repeat 2 56 0 2249 98 3 0 chr10 8584871 8585156 -137004132 - AluSp SINE Alu -27 286 1 206 275 110 0 chr10 8585929 8586020 -137003268 + MIR SINE MIR 118 218 -44 868 312 83 67 chr10 8586151 8586895 -137002393 + L2 LINE L2 1174 1929 -1385 710 338 115 16 chr10 8586912 8587039 -137002249 + L2 LINE L2 2304 2417 -897 2415 149 14 41 chr10 8587039 8587475 -137001813 - MSTB LTR MaLR -2 424 1 710 338 115 16 chr10 8587475 8587773 -137001515 + L2 LINE L2 2417 2771 -543 375 329 126 11 chr10 8588243 8588520 -137000768 + MLT1J2 LTR MaLR 64 372 -78 532 250 0 8 chr10 8588587 8588711 -137000577 + MER58B DNA MER1_type 219 341 0 242 396 139 0 chr10 8588845 8588989 -137000299 - L2 LINE L2 -5 3267 3104 1200 254 86 17 chr10 8589061 8589467 -136999821 - LTR16A LTR ERVL 0 450 17 214 342 5 86 chr10 8589477 8589664 -136999624 - L2 LINE L2 -210 3062 2891 1014 128 41 0 chr10 8590359 8590531 -136998757 - THE1C LTR MaLR 0 375 197 254 210 16 0 chr10 8590597 8590677 -136998611 + (TATTG)n Simple_repeat Simple_repeat 1 81 0 2175 128 3 13 chr10 8591192 8591504 -136997784 - AluSx SINE Alu -3 309 1 411 303 96 28 chr10 8591598 8591776 -136997512 - L3b LINE CR1 -118 1465 1276 4683 50 0 3 chr10 8593300 8593880 -136995408 - L1PA5 LINE L1 -1 6153 5576 203 255 43 128 chr10 8594005 8594146 -136995142 - L2 LINE L2 -217 3055 2927 729 141 62 23 chr10 8594395 8594523 -136994765 + FLAM_C SINE Alu 1 133 0 21 0 0 0 chr10 8596405 8596426 -136992862 + AT_rich Low_complexity Low_complexity 1 21 0 2487 61 0 0 chr10 8596805 8597098 -136992190 + AluY SINE Alu 3 295 -16 2422 97 0 0 chr10 8597390 8597701 -136991587 + AluSx SINE Alu 1 311 -1 646 322 19 14 chr10 8600503 8600714 -136988574 + MIR SINE MIR 3 214 -48 1577 226 7 0 chr10 8600786 8601136 -136988152 - AluJo SINE Alu 0 352 1 206 231 115 26 chr10 8601139 8601217 -136988071 + L2 LINE L2 3188 3272 0 864 136 0 22 chr10 8602181 8602365 -136986923 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 200 108 0 27 chr10 8602453 8602490 -136986798 + (TCCC)n Simple_repeat Simple_repeat 4 39 0 186 229 16 66 chr10 8602552 8602613 -136986675 - L2 LINE L2 0 3313 3256 230 236 0 18 chr10 8603538 8603593 -136985695 + (TG)n Simple_repeat Simple_repeat 1 54 0 2333 153 9 24 chr10 8604743 8605168 -136984120 + MSTA LTR MaLR 1 419 -9 362 123 0 3 chr10 8605270 8605521 -136983767 + AluSg SINE Alu 1 323 0 566 49 12 0 chr10 8606796 8606878 -136982410 + (CA)n Simple_repeat Simple_repeat 2 84 0 684 206 55 7 chr10 8607858 8608004 -136981284 - MER105 DNA DNA -1 203 51 879 15 2 92 chr10 8608395 8608873 -136980415 + (TA)n Simple_repeat Simple_repeat 1 435 0 235 61 61 51 chr10 8608859 8608957 -136980331 + (CATAT)n Simple_repeat Simple_repeat 2 100 0 * 240 343 52 0 chr10 8609405 8609539 -136979749 + L2 LINE L2 2890 3030 -283 1249 104 5 40 chr10 8609548 8609749 -136979539 - L1MA5A LINE L1 0 6297 6104 1148 145 0 2 chr10 8609752 8609993 -136979295 - AluJb SINE Alu -15 297 16 1665 139 20 10 chr10 8610009 8610303 -136978985 - L1MA5A LINE L1 -187 6110 5814 383 322 82 19 chr10 8610340 8610548 -136978740 + L2 LINE L2 3093 3313 0 2664 45 0 3 chr10 8610701 8611013 -136978275 - AluY SINE Alu 0 311 1 915 68 0 68 chr10 8611013 8611137 -136978151 - L1PA7 LINE L1 -7 6147 6031 1892 128 36 4 chr10 8611138 8611419 -136977869 - AluSx SINE Alu -22 290 1 558 167 0 0 chr10 8611900 8611984 -136977304 + AluJb SINE Alu 137 220 -92 2917 119 2 36 chr10 8611984 8612239 -136977049 + L1PB2 LINE L1 5721 5956 -195 2180 103 7 0 chr10 8612239 8612529 -136976759 + AluSq SINE Alu 1 292 -21 2917 119 2 36 chr10 8612529 8612718 -136976570 + L1PB2 LINE L1 5956 6150 -1 350 298 93 4 chr10 8612779 8612940 -136976348 + MIR SINE MIR 16 188 -74 679 303 85 43 chr10 8613119 8613662 -136975626 - MLT1L LTR MaLR -9 606 1 2220 112 0 20 chr10 8614152 8614457 -136974831 - AluSg SINE Alu -11 299 1 1936 166 3 0 chr10 8614488 8614790 -136974498 - AluSx SINE Alu -9 303 1 22 35 0 0 chr10 8614928 8614957 -136974331 + AT_rich Low_complexity Low_complexity 1 29 0 454 318 28 74 chr10 8615310 8615593 -136973695 + L3 LINE CR1 1307 1576 -1 357 75 0 0 chr10 8616514 8616567 -136972721 + (TA)n Simple_repeat Simple_repeat 1 53 0 2272 100 0 3 chr10 8616631 8616931 -136972357 + AluSg SINE Alu 2 300 -10 261 0 0 0 chr10 8617302 8617331 -136971957 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 244 145 43 58 chr10 8617459 8617528 -136971760 - L1P3 LINE L1 -5949 512 445 1787 138 35 21 chr10 8621428 8621717 -136967571 + AluSx SINE Alu 1 293 -19 218 225 0 0 chr10 8622005 8622045 -136967243 + MIR SINE MIR 40 79 -129 267 299 63 67 chr10 8622223 8622477 -136966811 - L2 LINE L2 -341 2973 2721 566 135 101 0 chr10 8623064 8623185 -136966103 + AluJb SINE Alu 187 316 0 287 243 92 25 chr10 8623283 8623405 -136965883 - MIR SINE MIR -63 145 38 430 267 35 26 chr10 8623930 8624046 -136965242 + MIR SINE MIR 3 119 -143 428 282 18 9 chr10 8624101 8624211 -136965077 - L2 LINE L2 -10 3303 3193 994 181 5 29 chr10 8624372 8624576 -136964712 + Charlie5 DNA MER1_type 2 200 -2412 * 1085 193 59 15 chr10 8624562 8624832 -136964456 + Charlie5 DNA MER1_type 2343 2624 0 309 242 68 37 chr10 8625989 8626102 -136963186 - MIR SINE MIR -81 127 11 1380 179 33 22 chr10 8626176 8626500 -136962788 + AluJo SINE Alu 34 312 0 201 265 137 49 chr10 8627794 8627896 -136961392 + L2 LINE L2 3162 3272 0 1843 166 31 0 chr10 8628874 8629164 -136960124 + AluJb SINE Alu 5 303 -9 236 270 113 26 chr10 8630268 8630383 -136958905 + L2 LINE L2 3182 3306 -7 850 248 41 37 chr10 8632147 8632389 -136956899 + MIR SINE MIR 1 243 -19 277 223 136 10 chr10 8632509 8632612 -136956676 - MER103 DNA DNA -47 119 4 247 284 55 37 chr10 8633734 8633764 -136955524 + MIR3 SINE MIR 71 99 -109 1961 145 0 31 chr10 8633764 8634082 -136955206 - AluJo SINE Alu -4 308 1 247 284 55 37 chr10 8634082 8634160 -136955128 + MIR3 SINE MIR 99 181 -27 215 197 0 45 chr10 8635183 8635249 -136954039 + (TGAA)n Simple_repeat Simple_repeat 1 63 0 1737 158 7 34 chr10 8635370 8635668 -136953620 - AluJo SINE Alu -22 290 1 2128 113 13 10 chr10 8636159 8636468 -136952820 + AluSx SINE Alu 1 310 -2 819 153 8 0 chr10 8636546 8636677 -136952611 - FLAM_C SINE Alu 0 143 12 44 20 0 0 chr10 8636760 8636811 -136952477 + AT_rich Low_complexity Low_complexity 1 51 0 251 277 98 103 chr10 8636823 8637254 -136952034 - L2 LINE L2 -6 3307 2875 3925 142 89 8 chr10 8637254 8637908 -136951380 - MER39 LTR ERV1 0 707 1 251 277 98 103 chr10 8637908 8638059 -136951229 - L2 LINE L2 -438 2875 2725 1872 153 24 0 chr10 8638059 8638346 -136950942 + AluJb SINE Alu 1 294 -18 251 277 98 103 chr10 8638346 8638507 -136950781 - L2 LINE L2 -588 2725 2553 800 183 0 0 chr10 8638719 8638839 -136950449 - FLAM_C SINE Alu -22 121 2 497 302 108 29 chr10 8639523 8639867 -136949421 + MLT1J LTR MaLR 106 476 -35 1610 185 3 64 chr10 8640100 8640430 -136948858 + AluJb SINE Alu 1 310 -2 181 308 0 0 chr10 8640708 8640760 -136948528 - L2 LINE L2 0 3313 3262 846 165 0 0 chr10 8640954 8641087 -136948201 - FLAM_C SINE Alu 0 133 1 1846 129 20 0 chr10 8641154 8641447 -136947841 + AluSx SINE Alu 24 321 0 5031 94 12 0 chr10 8641763 8642415 -136946873 - L1PA10 LINE L1 -4 6164 5505 210 368 128 0 chr10 8642764 8642881 -136946407 - L2 LINE L2 -4 3268 3137 1654 171 50 4 chr10 8643717 8643997 -136945291 + AluJb SINE Alu 1 293 -19 632 241 97 5 chr10 8644622 8644817 -136944471 + L2 LINE L2 2132 2344 -970 186 43 0 0 chr10 8644818 8644841 -136944447 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 826 197 58 21 chr10 8644845 8645033 -136944255 - AluJo SINE Alu -31 281 87 180 0 0 0 chr10 8645051 8645071 -136944217 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1802 164 4 0 chr10 8645084 8645359 -136943929 - AluSx SINE Alu -36 276 1 1987 130 10 3 chr10 8645836 8646129 -136943159 - AluSx SINE Alu -17 295 1 707 304 69 42 chr10 8646129 8646631 -136942657 - L2 LINE L2 -21 3292 2706 1040 93 2 7 chr10 8646631 8646777 -136942511 - L1P LINE L1 -1500 4646 4498 2134 89 4 0 chr10 8646777 8647047 -136942241 + L1PA7 LINE L1 5884 6154 0 564 279 105 39 chr10 8647068 8647154 -136942134 - L2 LINE L2 -613 2701 2622 628 239 123 7 chr10 8647154 8647309 -136941979 - MER96 DNA MER1_type -2 173 1 564 279 105 39 chr10 8647309 8647631 -136941657 - L2 LINE L2 -692 2622 2266 791 5 0 97 chr10 8647797 8647992 -136941296 + (TA)n Simple_repeat Simple_repeat 2 177 0 243 372 85 16 chr10 8648056 8648185 -136941103 - L2 LINE L2 -12 3260 3123 558 348 77 23 chr10 8648235 8648753 -136940535 - L2 LINE L2 -556 2758 2213 277 324 56 9 chr10 8648911 8649019 -136940269 + L2 LINE L2 3199 3311 -2 314 293 136 16 chr10 8649049 8649291 -136939997 - L2 LINE L2 -1292 2022 1752 185 250 0 94 chr10 8649500 8649564 -136939724 - L3 LINE CR1 -219 1358 1301 1609 135 27 30 chr10 8649870 8650167 -136939121 + AluJb SINE Alu 1 296 -16 312 27 0 0 chr10 8650785 8650822 -136938466 + (TG)n Simple_repeat Simple_repeat 2 38 0 228 35 0 0 chr10 8650821 8650850 -136938438 + (TA)n Simple_repeat Simple_repeat 1 29 0 * 296 306 42 119 chr10 8651488 8651890 -136937398 - L2 LINE L2 -4 3268 2898 2872 7 0 0 chr10 8651906 8652214 -136937074 - AluY SINE Alu -3 308 1 6727 94 10 3 chr10 8652222 8653457 -136935831 + L1PA12 LINE L1 4921 6161 -7 2554 52 7 0 chr10 8653858 8654163 -136935125 + AluY SINE Alu 1 307 -4 913 131 0 8 chr10 8654411 8654541 -136934747 + FLAM_C SINE Alu 1 129 -4 348 230 103 40 chr10 8655027 8655153 -136934135 + MIR SINE MIR 123 256 -6 1791 178 69 94 chr10 8655641 8655718 -136933570 - MLT1C LTR MaLR 0 467 390 1655 143 31 0 chr10 8655718 8655847 -136933441 - AluSx SINE Alu -46 266 142 423 0 0 0 chr10 8655847 8655894 -136933394 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 1655 143 31 0 chr10 8655894 8656022 -136933266 - AluSx SINE Alu -170 142 1 1791 178 69 94 chr10 8656022 8656423 -136932865 - MLT1C LTR MaLR -77 390 1 347 246 25 49 chr10 8656657 8656779 -136932509 - L2 LINE L2 -15 3298 3180 597 128 0 86 chr10 8656821 8656850 -136932438 + MLT1B LTR MaLR 81 111 -279 1856 156 0 47 chr10 8656850 8657171 -136932117 + AluSx SINE Alu 1 306 -6 597 128 0 86 chr10 8657171 8657258 -136932030 + MLT1B LTR MaLR 111 187 -203 723 69 11 0 chr10 8657266 8657353 -136931935 + AluY SINE Alu 205 292 -19 980 188 15 10 chr10 8657370 8657567 -136931721 + MLT1B LTR MaLR 188 385 -5 370 216 98 10 chr10 8657571 8657673 -136931615 + MER58B DNA MER1_type 186 296 -45 2104 137 10 0 chr10 8657765 8658071 -136931217 - AluY SINE Alu -2 309 1 487 300 96 26 chr10 8658159 8658389 -136930899 - MIR SINE MIR -14 248 3 3719 153 13 38 chr10 8658465 8659145 -136930143 - L1MA9 LINE L1 -146 6166 5504 343 287 128 0 chr10 8659221 8659315 -136929973 - L2 LINE L2 -25 3288 3183 31 0 0 0 chr10 8659698 8659729 -136929559 + AT_rich Low_complexity Low_complexity 1 31 0 2101 116 13 16 chr10 8659744 8660054 -136929234 - L1PA14 LINE L1 -17 6144 5836 949 162 0 0 chr10 8660768 8660910 -136928378 - FRAM SINE Alu -15 161 20 30 59 0 0 chr10 8662330 8662381 -136926907 + AT_rich Low_complexity Low_complexity 1 51 0 219 69 0 0 chr10 8662387 8662416 -136926872 + (TCTA)n Simple_repeat Simple_repeat 2 30 0 1920 139 0 17 chr10 8662416 8662704 -136926584 - AluSx SINE Alu -23 289 7 432 0 0 0 chr10 8664433 8664481 -136924807 + (TAGA)n Simple_repeat Simple_repeat 3 50 0 200 83 0 28 chr10 8664481 8664517 -136924771 + (TA)n Simple_repeat Simple_repeat 2 36 0 21 36 0 0 chr10 8664888 8664916 -136924372 + AT_rich Low_complexity Low_complexity 1 28 0 256 296 12 12 chr10 8664974 8665055 -136924233 - MIR SINE MIR -71 137 57 207 0 0 0 chr10 8665058 8665081 -136924207 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1897 156 0 0 chr10 8665633 8665908 -136923380 + AluSx SINE Alu 1 275 -37 244 122 61 0 chr10 8666421 8666503 -136922785 + (TA)n Simple_repeat Simple_repeat 1 87 0 434 107 71 6 chr10 8666517 8666686 -136922602 + (TA)n Simple_repeat Simple_repeat 1 180 0 208 152 57 13 chr10 8666698 8666856 -136922432 + (TA)n Simple_repeat Simple_repeat 2 166 0 236 272 44 38 chr10 8666875 8667033 -136922255 + L1MC4 LINE L1 7719 7877 -165 220 296 0 0 chr10 8667040 8667094 -136922194 + (TATATG)n Simple_repeat Simple_repeat 2 55 0 913 119 0 0 chr10 8667314 8667456 -136921832 - FLAM_C SINE Alu 0 142 1 223 317 58 50 chr10 8667474 8667594 -136921694 - MIR SINE MIR -139 123 3 2015 152 141 8 chr10 8668676 8669052 -136920236 - MSTA LTR MaLR 0 428 3 222 279 108 31 chr10 8669194 8669323 -136919965 - L2 LINE L2 0 3313 3175 2091 241 156 142 chr10 8669397 8669547 -136919741 - L2 LINE L2 -8 3305 3159 2044 137 7 0 chr10 8669547 8669839 -136919449 + AluSx SINE Alu 8 301 -11 2091 241 156 142 chr10 8669839 8670589 -136918699 - L2 LINE L2 -154 3159 2422 1275 169 0 14 chr10 8670589 8670802 -136918486 + AluJo SINE Alu 1 210 -102 2091 241 156 142 chr10 8670802 8670821 -136918467 - L2 LINE L2 -891 2422 2405 221 0 35 0 chr10 8670821 8670850 -136918438 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 2091 241 156 142 chr10 8670850 8671536 -136917752 - L2 LINE L2 -908 2405 1731 2145 118 0 13 chr10 8671536 8671840 -136917448 - AluSx SINE Alu -12 300 1 2091 241 156 142 chr10 8671840 8672377 -136916911 - L2 LINE L2 -1582 1731 1203 2292 81 24 0 chr10 8672377 8672673 -136916615 - AluSp SINE Alu -10 303 1 1774 181 0 16 chr10 8672673 8672987 -136916301 - AluJo SINE Alu -3 309 1 2091 241 156 142 chr10 8672987 8673117 -136916171 - L2 LINE L2 -2109 1204 790 315 0 0 0 chr10 8675576 8675611 -136913677 + (CA)n Simple_repeat Simple_repeat 2 36 0 2311 101 0 3 chr10 8676813 8676835 -136912453 - AluY SINE Alu -4 307 286 210 105 0 0 chr10 8676835 8676873 -136912415 + (TTTAA)n Simple_repeat Simple_repeat 3 40 0 2311 101 0 3 chr10 8676873 8677158 -136912130 - AluY SINE Alu -25 286 1 1383 187 90 14 chr10 8677163 8677441 -136911847 - AluJb SINE Alu -13 299 1 204 40 0 0 chr10 8677742 8677767 -136911521 + (A)n Simple_repeat Simple_repeat 1 25 0 525 274 86 16 chr10 8678200 8678386 -136910902 - MIR SINE MIR -54 208 10 210 302 245 0 chr10 8679022 8679128 -136910160 - L2 LINE L2 -4 3268 3137 633 89 50 0 chr10 8679574 8679675 -136909613 + L1PA3 LINE L1 5909 6014 -141 343 122 0 0 chr10 8679776 8679825 -136909463 - L1PA13 LINE L1 -293 5870 5822 401 352 91 13 chr10 8680706 8680936 -136908352 - MIR SINE MIR -3 259 12 1990 138 0 0 chr10 8681204 8681479 -136907809 + AluSx SINE Alu 1 275 -37 207 0 0 0 chr10 8681484 8681507 -136907781 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 829 172 0 0 chr10 8682028 8682150 -136907138 + FLAM_C SINE Alu 2 123 -20 227 227 39 16 chr10 8682790 8682918 -136906370 + (TA)n Simple_repeat Simple_repeat 2 132 0 1849 173 146 3 chr10 8683331 8683700 -136905588 + MSTB LTR MaLR 1 422 -4 416 213 71 39 chr10 8683734 8683861 -136905427 - MIR SINE MIR -120 142 12 1500 172 67 0 chr10 8684606 8684891 -136904397 - AluJo SINE Alu -8 304 1 198 281 73 135 chr10 8684896 8685184 -136904104 + L2 LINE L2 3001 3270 -2 354 98 0 0 chr10 8687390 8687441 -136901847 + (TTCC)n Simple_repeat Simple_repeat 2 52 0 1463 179 39 8 chr10 8687462 8687719 -136901569 - AluJo SINE Alu -47 265 1 240 122 0 0 chr10 8687754 8687795 -136901493 + (A)n Simple_repeat Simple_repeat 1 41 0 665 269 91 10 chr10 8688569 8688777 -136900511 + MIR SINE MIR 6 230 -32 831 155 54 7 chr10 8688900 8689048 -136900240 - AluJo/FRAM SINE Alu -2 310 156 519 120 0 0 chr10 8689048 8689123 -136900165 - AluJ/FLAM SINE Alu -233 69 3 2582 59 0 0 chr10 8690309 8690616 -136898672 - AluY SINE Alu -4 307 1 252 59 0 0 chr10 8690811 8690845 -136898443 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 1950 167 0 3 chr10 8691787 8692098 -136897190 + AluSx SINE Alu 2 311 -1 1108 150 12 0 chr10 8692098 8692258 -136897030 + AluJb SINE Alu 135 296 -16 1635 194 36 72 chr10 8692999 8693031 -136896257 - MLT2C1 LTR ERVL -8 389 357 181 57 57 0 chr10 8693031 8693066 -136896222 + (TG)n Simple_repeat Simple_repeat 2 38 0 1635 194 36 72 chr10 8693066 8693098 -136896190 - MLT2C1 LTR ERVL -40 357 325 2000 117 47 7 chr10 8693098 8693396 -136895892 + AluSg SINE Alu 1 310 0 1635 194 36 72 chr10 8693396 8693721 -136895567 - MLT2C1 LTR ERVL -72 325 13 296 296 59 32 chr10 8695152 8695362 -136893926 + MIR SINE MIR 8 262 0 2206 121 3 3 chr10 8695709 8696016 -136893272 - AluSx SINE Alu -5 307 1 186 339 15 15 chr10 8696313 8696378 -136892910 - MIR3 SINE MIR -26 182 118 355 404 31 6 chr10 8696497 8696658 -136892630 + L2 LINE L2 3107 3271 -1 216 167 37 19 chr10 8698119 8698173 -136891115 + CT-rich Low_complexity Low_complexity 3 57 0 1604 182 7 39 chr10 8698569 8698876 -136890412 - AluJb SINE Alu -15 297 1 187 224 0 61 chr10 8699889 8699938 -136889350 - L2 LINE L2 0 3272 3227 21 36 0 0 chr10 8701935 8701963 -136887325 + AT_rich Low_complexity Low_complexity 1 28 0 191 236 125 14 chr10 8702955 8703027 -136886261 + MIR SINE MIR 84 164 -44 191 289 19 0 chr10 8703231 8703283 -136886005 - L2 LINE L2 -2 3270 3218 214 353 106 0 chr10 8703405 8703490 -136885798 - L2 LINE L2 -40 3232 3139 241 252 160 8 chr10 8703530 8703649 -136885639 + L2 LINE L2 1181 1317 -1997 2165 102 10 0 chr10 8703650 8703945 -136885343 - AluSc SINE Alu -10 299 2 2202 129 11 33 chr10 8704427 8704791 -136884497 + L1PA14 LINE L1 5797 6152 -9 322 263 188 15 chr10 8705223 8705356 -136883932 + MER5B DNA MER1_type 21 176 -2 407 278 15 60 chr10 8705369 8705502 -136883786 - MER5B DNA MER1_type 0 178 52 781 286 45 11 chr10 8705696 8705983 -136883305 + AluJo SINE Alu 1 297 -5 840 144 0 0 chr10 8706323 8706441 -136882847 + FLAM_C SINE Alu 1 118 -25 22 36 0 55 chr10 8706447 8706467 -136882821 + AT_rich Low_complexity Low_complexity 1 21 -31 3830 95 10 0 chr10 8706467 8706961 -136882327 + L1PA10 LINE L1 5665 6163 -5 22 36 0 55 chr10 8706961 8706995 -136882293 + AT_rich Low_complexity Low_complexity 21 52 0 2234 113 10 3 chr10 8707983 8708293 -136880995 - AluSx SINE Alu 0 312 1 331 336 195 34 chr10 8708541 8708764 -136880524 + L3 LINE CR1 1099 1285 -292 1742 161 27 7 chr10 8708764 8709056 -136880232 + AluJo SINE Alu 1 298 -14 331 336 195 34 chr10 8709056 8709243 -136880045 + L3 LINE CR1 1285 1575 -2 516 106 47 35 chr10 8709818 8709903 -136879385 + FRAM SINE Alu 30 115 -61 484 66 11 66 chr10 8710237 8710328 -136878960 - L1PA13 LINE L1 0 6163 6078 1530 57 38 5 chr10 8710334 8710543 -136878745 - L1PA12 LINE L1 -49 6119 5904 2291 85 0 3 chr10 8710547 8710842 -136878446 - AluSx SINE Alu -18 294 1 216 0 0 0 chr10 8710910 8710934 -136878354 + (A)n Simple_repeat Simple_repeat 1 24 0 211 232 101 29 chr10 8711370 8711439 -136877849 + MIR SINE MIR 117 190 -72 1693 160 3 10 chr10 8711512 8711805 -136877483 - AluJo SINE Alu -13 299 9 198 0 0 0 chr10 8711846 8711868 -136877420 + (T)n Simple_repeat Simple_repeat 1 22 0 849 92 0 0 chr10 8711955 8712075 -136877213 + (TTAGGG)n Simple_repeat Simple_repeat 6 125 0 1297 68 6 28 chr10 8712360 8712536 -136876752 - L1PA4 LINE L1 -1 6154 5983 1924 133 31 3 chr10 8712559 8712853 -136876435 - AluSx SINE Alu -10 302 1 268 343 84 24 chr10 8713005 8713171 -136876117 - MIR SINE MIR -2 260 85 220 351 82 62 chr10 8713199 8713504 -136875784 - L2 LINE L2 -11 3261 2951 2054 96 64 0 chr10 8714530 8714812 -136874476 - AluSq SINE Alu -13 300 1 23 54 0 0 chr10 8716385 8716422 -136872866 + AT_rich Low_complexity Low_complexity 1 37 0 217 231 79 4 chr10 8716805 8716876 -136872412 + MIR SINE MIR 77 151 -57 305 371 59 27 chr10 8716927 8717148 -136872140 + MIR SINE MIR 32 259 -3 748 294 5 23 chr10 8717221 8717439 -136871849 - MIR SINE MIR -21 241 28 1704 153 7 27 chr10 8717447 8717741 -136871547 - AluJo SINE Alu -20 292 5 252 178 76 119 chr10 8717892 8718010 -136871278 + MER103 DNA DNA 8 120 -46 528 136 0 0 chr10 8718071 8718159 -136871129 + (TTCC)n Simple_repeat Simple_repeat 1 88 0 373 318 71 26 chr10 8720340 8720494 -136868794 - MIR3 SINE MIR -46 162 2 2299 114 0 0 chr10 8720715 8721023 -136868265 + AluSg SINE Alu 1 308 -2 243 88 0 0 chr10 8721540 8721574 -136867714 + (A)n Simple_repeat Simple_repeat 1 34 0 797 262 91 92 chr10 8722021 8722143 -136867145 - L2 LINE L2 -165 3148 3027 2266 92 3 10 chr10 8722143 8722448 -136866840 + AluSp SINE Alu 1 303 -10 797 262 91 92 chr10 8722448 8722982 -136866306 - L2 LINE L2 -286 3027 2502 1713 182 129 29 chr10 8722983 8723023 -136866265 - MER47B DNA MER2_type -1905 418 383 2738 131 13 0 chr10 8723023 8723421 -136865867 + MER57A LTR ERV1 1 403 0 1713 182 129 29 chr10 8723421 8723760 -136865528 - MER47B DNA MER2_type -1940 383 1 265 197 0 16 chr10 8723798 8723859 -136865429 + L1MA4 LINE L1 6230 6289 -11 201 108 0 0 chr10 8723867 8723878 -136865410 + (TTAA)n Simple_repeat Simple_repeat 2 12 -26 1861 161 0 20 chr10 8723878 8724182 -136865106 - AluJb SINE Alu -14 298 1 201 108 0 0 chr10 8724182 8724193 -136865095 + (TTAA)n Simple_repeat Simple_repeat 12 22 -16 2423 62 3 0 chr10 8724193 8724485 -136864803 - AluY SINE Alu -13 298 6 201 108 0 0 chr10 8724485 8724498 -136864790 + (TTAA)n Simple_repeat Simple_repeat 21 38 0 1622 232 139 24 chr10 8724508 8725042 -136864246 - L2 LINE L2 -842 2472 1878 987 201 7 97 chr10 8725079 8725358 -136863930 - L1MB8 LINE L1 0 6178 5925 2509 160 17 0 chr10 8725359 8725777 -136863511 - L1MA6 LINE L1 -237 6063 5639 372 285 16 24 chr10 8725777 8725900 -136863388 - L2 LINE L2 -1431 1883 1762 2683 108 19 11 chr10 8726648 8727020 -136862268 + THE1C LTR MaLR 1 375 0 21 0 0 0 chr10 8727487 8727508 -136861780 + AT_rich Low_complexity Low_complexity 1 21 0 2689 29 0 16 chr10 8728100 8728415 -136860873 - AluY SINE Alu -1 310 1 907 176 152 10 chr10 8728880 8729084 -136860204 + ORSL DNA AcHobo 19 251 -24 2198 123 0 7 chr10 8729259 8729606 -136859682 - AluSg SINE Alu 0 345 1 1414 84 0 1 chr10 8729811 8729828 -136859460 + L1PA8 LINE L1 5792 5808 -364 1339 76 32 32 chr10 8729828 8730013 -136859275 - L1PA8 LINE L1 -4 6168 5984 1414 84 0 1 chr10 8730013 8730191 -136859097 + L1PA8 LINE L1 5808 5985 -187 1022 185 0 6 chr10 8730877 8731050 -136858238 - AluJo SINE Alu -130 182 11 2264 89 0 3 chr10 8731227 8731520 -136857768 - AluSc SINE Alu -17 292 1 1914 136 43 13 chr10 8731805 8732106 -136857182 - AluSx SINE Alu -2 310 1 315 339 26 52 chr10 8732163 8732278 -136857010 + MIR SINE MIR 34 145 -63 29 28 0 0 chr10 8732719 8732755 -136856533 + AT_rich Low_complexity Low_complexity 1 36 0 201 239 22 0 chr10 8732773 8732819 -136856469 - MIR SINE MIR -10 252 206 444 340 42 37 chr10 8733027 8733371 -136855917 - L1MC/D LINE L1 -571 5591 5268 823 171 0 0 chr10 8733407 8733524 -136855764 + FLAM_C SINE Alu 2 118 -25 387 0 0 0 chr10 8733527 8733570 -136855718 + (TTA)n Simple_repeat Simple_repeat 2 44 0 600 262 131 9 chr10 8734099 8734328 -136854960 - L1ME LINE L1 -335 5786 5530 458 338 33 14 chr10 8734714 8734924 -136854364 - MIR SINE MIR -1 261 48 181 284 47 88 chr10 8735061 8735209 -136854079 - L2 LINE L2 -829 2485 2344 856 157 8 0 chr10 8735279 8735413 -136853875 + AluJo SINE Alu 1 135 -177 36 77 0 0 chr10 8735430 8735508 -136853780 + AT_rich Low_complexity Low_complexity 1 78 0 222 364 13 0 chr10 8735987 8736064 -136853224 - L2 LINE L2 -1007 2307 2230 1238 268 66 70 chr10 8736107 8736682 -136852606 + MLT1G LTR MaLR 7 579 -11 1421 193 0 53 chr10 8737145 8737446 -136851842 + AluJo SINE Alu 3 287 -25 249 108 0 0 chr10 8737446 8737483 -136851805 + (GGGGA)n Simple_repeat Simple_repeat 2 38 0 532 163 41 0 chr10 8737547 8737645 -136851643 + MLT1G LTR MaLR 489 590 0 2158 235 74 10 chr10 8737791 8738510 -136850778 - L1ME1 LINE L1 -281 5885 5119 248 259 42 105 chr10 8738517 8738660 -136850628 + L1ME1 LINE L1 5998 6131 -35 2172 78 18 4 chr10 8739379 8739689 -136849599 - AluSq SINE Alu 0 315 2 253 75 38 19 chr10 8739728 8739781 -136849507 + T-rich Low_complexity Low_complexity 2 55 0 551 281 7 0 chr10 8740227 8740380 -136848908 - L1MC/D LINE L1 -923 5223 5070 1833 154 3 7 chr10 8740573 8740886 -136848402 - AluSx SINE Alu 0 312 1 2059 141 7 0 chr10 8741207 8741511 -136847777 + AluSq SINE Alu 1 306 -7 267 103 0 0 chr10 8741532 8741571 -136847717 + (GGGA)n Simple_repeat Simple_repeat 2 40 0 433 218 171 47 chr10 8742271 8742441 -136846847 + MIR SINE MIR 42 232 -30 230 252 107 38 chr10 8742522 8742653 -136846635 + L1ME4a LINE L1 5965 6104 -17 316 297 86 40 chr10 8742686 8743083 -136846205 + L1ME4a LINE L1 5682 6096 -25 1901 143 0 7 chr10 8743132 8743412 -136845876 + AluSx SINE Alu 16 293 -19 2400 124 19 8 chr10 8744145 8744508 -136844780 + L1MA1 LINE L1 5936 6302 0 1663 188 0 7 chr10 8744525 8744850 -136844438 + AluJb SINE Alu 1 323 0 263 323 21 4 chr10 8745039 8745168 -136844120 + MIR SINE MIR 14 147 -61 186 143 0 0 chr10 8748824 8748859 -136840429 + (TTTTC)n Simple_repeat Simple_repeat 2 36 0 3289 168 42 5 chr10 8749106 8749672 -136839616 + L1PA16 LINE L1 5576 6162 -4 323 287 130 0 chr10 8752010 8752118 -136837170 + L2 LINE L2 3192 3313 0 2222 107 0 3 chr10 8753074 8753365 -136835923 - AluSc SINE Alu -19 290 1 2531 151 9 24 chr10 8753468 8753893 -136835395 - MSTA LTR MaLR -9 419 1 198 294 20 0 chr10 8755881 8755932 -136833356 + MIR SINE MIR 93 144 -64 553 263 22 62 chr10 8755946 8756125 -136833163 - MER5B DNA MER1_type -6 172 1 728 225 144 148 chr10 8757022 8757529 -136831759 + MLT1D LTR MaLR 1 505 0 1747 156 16 41 chr10 8757703 8758023 -136831265 - AluJb SINE Alu 0 312 1 1317 163 8 145 chr10 8758902 8759302 -136829986 - MLT1B LTR MaLR -3 387 43 191 367 0 22 chr10 8760203 8760293 -136828995 + MIR SINE MIR 25 112 -96 2613 82 13 16 chr10 8760369 8760745 -136828543 - THE1C LTR MaLR 0 375 1 25 0 0 0 chr10 8762086 8762111 -136827177 + AT_rich Low_complexity Low_complexity 1 25 0 1142 211 0 31 chr10 8762142 8762369 -136826919 - AluJo SINE Alu -92 220 1 23 0 0 0 chr10 8762908 8762931 -136826357 + AT_rich Low_complexity Low_complexity 1 23 0 699 202 93 0 chr10 8763506 8763635 -136825653 + FAM SINE Alu 18 158 -27 993 104 6 12 chr10 8763635 8763808 -136825480 + (GAAA)n Simple_repeat Simple_repeat 1 172 0 314 154 0 15 chr10 8763838 8763903 -136825385 + GA-rich Low_complexity Low_complexity 1 64 0 1836 115 83 0 chr10 8764319 8764597 -136824691 - AluSx SINE Alu -10 302 2 320 338 50 14 chr10 8764666 8764805 -136824483 - L2 LINE L2 -5 3308 3165 249 245 337 0 chr10 8764904 8765002 -136824286 + L2 LINE L2 3182 3312 -1 298 322 152 23 chr10 8765026 8765374 -136823914 - L2 LINE L2 -56 3257 2865 1254 158 0 19 chr10 8765597 8765806 -136823482 + AluJo SINE Alu 86 290 -22 1830 164 65 14 chr10 8766245 8766616 -136822672 + MLT1B LTR MaLR 1 390 0 1840 125 0 4 chr10 8766840 8767096 -136822192 + AluSx SINE Alu 1 255 -57 234 0 0 0 chr10 8767145 8767171 -136822117 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 2187 98 0 0 chr10 8767291 8767625 -136821663 + AluSq SINE Alu 1 334 0 483 200 56 0 chr10 8767983 8768073 -136821215 + FRAM SINE Alu 39 133 -43 1562 189 17 14 chr10 8768405 8768701 -136820587 - AluJo SINE Alu -15 297 1 200 135 0 27 chr10 8769591 8769628 -136819660 + (TTG)n Simple_repeat Simple_repeat 1 36 0 2225 109 0 3 chr10 8769938 8770232 -136819056 + AluSc SINE Alu 1 293 -16 329 287 130 0 chr10 8771188 8771296 -136817992 - L2 LINE L2 0 3313 3192 3035 166 42 5 chr10 8773634 8774200 -136815088 - L1PA16 LINE L1 -4 6162 5576 227 182 0 0 chr10 8774440 8774484 -136814804 + A-rich Low_complexity Low_complexity 3 46 0 1875 167 0 13 chr10 8776659 8776959 -136812329 + AluJo SINE Alu 1 296 -16 22 35 0 0 chr10 8777080 8777109 -136812179 + AT_rich Low_complexity Low_complexity 1 29 0 1984 181 37 5 chr10 8777159 8777589 -136811699 - L1MA9 LINE L1 -36 6276 5833 694 275 65 63 chr10 8777589 8778047 -136811241 - MLT1J LTR MaLR -4 507 49 759 280 27 43 chr10 8778281 8778538 -136810750 - MIR SINE MIR 0 262 11 624 252 8 0 chr10 8779135 8779262 -136810026 + MIR SINE MIR 5 132 -130 1961 131 57 35 chr10 8779291 8779658 -136809630 - THE1C LTR MaLR 0 375 1 468 300 81 25 chr10 8779729 8779889 -136809399 - MIR SINE MIR -74 188 20 283 363 67 0 chr10 8781499 8781634 -136807654 - MIR SINE MIR -109 153 10 233 410 8 0 chr10 8783249 8783371 -136805917 + L2 LINE L2 2866 2988 -284 266 73 24 0 chr10 8783388 8783429 -136805859 + (TTCC)n Simple_repeat Simple_repeat 2 43 0 1799 169 51 0 chr10 8783450 8783803 -136805485 - AluJb SINE Alu 0 312 113 369 0 0 0 chr10 8783803 8783844 -136805444 + (TTTAA)n Simple_repeat Simple_repeat 3 43 0 1799 169 51 0 chr10 8783844 8783964 -136805324 - AluJb SINE Alu -199 113 1 1890 197 135 11 chr10 8784746 8784973 -136804315 - MLT2B1 LTR ERVL -12 508 311 504 0 0 0 chr10 8784973 8785029 -136804259 + (GA)n Simple_repeat Simple_repeat 1 56 0 1890 197 135 11 chr10 8785029 8785253 -136804035 - MLT2B1 LTR ERVL -209 311 1 27 0 0 0 chr10 8785286 8785313 -136803975 + AT_rich Low_complexity Low_complexity 1 27 0 205 313 15 0 chr10 8785421 8785488 -136803800 + L2 LINE L2 3202 3269 -3 5337 260 95 19 chr10 8785510 8786561 -136802727 - L1MEc LINE L1 -3613 2602 1632 264 30 0 0 chr10 8786561 8786594 -136802694 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 5337 260 95 19 chr10 8786594 8787967 -136801321 - L1MEc LINE L1 -4583 1632 47 446 274 113 21 chr10 8789693 8789879 -136799409 + MIR SINE MIR 59 261 -1 231 391 115 0 chr10 8790077 8790269 -136799019 + L3b LINE CR1 1350 1563 -20 1683 180 32 42 chr10 8790529 8790907 -136798381 - MLT1A2 LTR MaLR 0 374 1 1975 119 96 94 chr10 8791083 8791510 -136797778 - MSTA LTR MaLR 0 428 1 797 243 29 9 chr10 8793762 8793972 -136795316 - MER58A DNA MER1_type -8 216 3 424 214 97 62 chr10 8795181 8795326 -136793962 + MIR SINE MIR 99 248 -14 450 79 0 0 chr10 8795755 8795818 -136793470 + (CA)n Simple_repeat Simple_repeat 2 64 0 533 295 23 29 chr10 8797422 8797595 -136791693 - MIR3 SINE MIR -7 201 30 2179 96 19 29 chr10 8797750 8798064 -136791224 - AluY SINE Alu 0 311 1 23 0 0 0 chr10 8798396 8798419 -136790869 + AT_rich Low_complexity Low_complexity 1 23 0 223 320 87 0 chr10 8798864 8798967 -136790321 - MIR SINE MIR -46 216 105 1012 249 119 21 chr10 8799191 8799660 -136789628 - L1ME1 LINE L1 -8 6158 5644 278 273 11 68 chr10 8799878 8799966 -136789322 - L2 LINE L2 -1 3271 3189 198 0 0 0 chr10 8800069 8800091 -136789197 + (TG)n Simple_repeat Simple_repeat 1 22 0 * 543 16 0 0 chr10 8800090 8800154 -136789134 + (GA)n Simple_repeat Simple_repeat 1 64 0 299 130 19 0 chr10 8800884 8800938 -136788350 + (TA)n Simple_repeat Simple_repeat 1 55 0 324 233 11 22 chr10 8800946 8801036 -136788252 + L1MC4 LINE L1 6614 6702 -1340 260 266 11 21 chr10 8801039 8801133 -136788155 + (TA)n Simple_repeat Simple_repeat 1 93 0 526 148 16 23 chr10 8801144 8801272 -136788016 + (CATATA)n Simple_repeat Simple_repeat 2 128 0 183 264 0 57 chr10 8801934 8801987 -136787301 + MIR SINE MIR 205 254 -8 455 276 56 60 chr10 8802595 8802680 -136786608 - MIR SINE MIR 0 262 178 1801 159 48 40 chr10 8802680 8803052 -136786236 - THE1C LTR MaLR 0 375 1 455 276 56 60 chr10 8803052 8803198 -136786090 - MIR SINE MIR -84 178 32 651 230 63 0 chr10 8803332 8803506 -136785782 + MER58B DNA MER1_type 1 185 -156 639 255 31 0 chr10 8803578 8803739 -136785549 + MER58B DNA MER1_type 176 341 0 561 91 0 0 chr10 8803778 8803855 -136785433 - AluSc SINE Alu -180 129 53 772 252 55 18 chr10 8803954 8804172 -136785116 + MIR SINE MIR 32 257 -5 1655 128 45 0 chr10 8804608 8804851 -136784437 - AluSc SINE Alu -3 306 53 189 171 0 0 chr10 8804963 8804998 -136784290 + G-rich Low_complexity Low_complexity 1 35 0 1715 174 31 0 chr10 8805114 8805408 -136783880 + AluJo SINE Alu 1 303 -9 567 296 6 23 chr10 8805853 8806025 -136783263 + MIR SINE MIR 48 216 -46 322 353 92 0 chr10 8806111 8806264 -136783024 - MIR SINE MIR -72 190 24 2211 103 23 10 chr10 8807466 8807767 -136781521 - AluSq SINE Alu -8 305 1 400 345 78 14 chr10 8808026 8808307 -136780981 - L1ME4a LINE L1 -265 5856 5558 207 100 0 0 chr10 8808356 8808386 -136780902 + (GAAAA)n Simple_repeat Simple_repeat 2 31 0 1605 157 27 27 chr10 8808534 8808828 -136780460 - AluJo SINE Alu -18 294 1 2015 135 0 0 chr10 8808874 8809155 -136780133 + AluSx SINE Alu 1 281 -31 243 0 0 0 chr10 8809159 8809186 -136780102 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 578 312 113 0 chr10 8809214 8809435 -136779853 - MIR SINE MIR 0 262 17 1039 242 107 0 chr10 8809463 8809807 -136779481 - L1MB7 LINE L1 0 6184 5790 22 35 0 0 chr10 8810485 8810514 -136778774 + AT_rich Low_complexity Low_complexity 1 29 0 387 0 0 0 chr10 8810538 8810581 -136778707 + (CA)n Simple_repeat Simple_repeat 2 44 0 2086 117 0 26 chr10 8811894 8812201 -136777087 - AluSx SINE Alu -12 300 2 463 300 78 120 chr10 8812641 8813080 -136776208 - L2 LINE L2 -549 2765 2354 1485 192 8 0 chr10 8813080 8813340 -136775948 - AluJb SINE Alu -8 304 43 463 300 78 120 chr10 8813340 8813466 -136775822 - L2 LINE L2 -960 2354 2224 482 238 12 93 chr10 8813955 8814127 -136775161 - MIR SINE MIR -49 213 56 2139 133 0 22 chr10 8814796 8815113 -136774175 - AluSx SINE Alu -2 310 1 227 264 19 0 chr10 8816624 8816677 -136772611 - Charlie8 DNA MER1_type -2363 54 1 398 300 53 35 chr10 8817488 8817715 -136771573 + MLT1L LTR MaLR 368 598 -17 426 304 21 42 chr10 8817854 8818045 -136771243 + MIR SINE MIR 36 222 -40 273 156 39 0 chr10 8818063 8818140 -136771148 + (TA)n Simple_repeat Simple_repeat 1 80 0 2251 87 0 10 chr10 8818140 8818429 -136770859 - AluY SINE Alu -25 286 1 426 305 35 17 chr10 8818497 8818671 -136770617 - MIR SINE MIR -77 185 9 380 303 72 31 chr10 8818760 8818958 -136770330 - MIR SINE MIR -18 244 45 213 321 0 0 chr10 8819929 8819982 -136769306 - MIR3 SINE MIR -42 166 114 631 293 64 48 chr10 8819987 8820236 -136769052 - MIR SINE MIR 0 262 10 230 0 33 0 chr10 8820374 8820404 -136768884 + (CA)n Simple_repeat Simple_repeat 2 32 0 1215 128 159 23 chr10 8820948 8821205 -136768083 + L1MC1 LINE L1 5322 5613 -720 686 111 157 0 chr10 8821206 8821314 -136767974 - FLAM_C SINE Alu -18 125 1 1626 184 3 14 chr10 8821322 8821616 -136767672 - AluJo SINE Alu 0 312 22 4040 154 33 0 chr10 8821617 8822323 -136766965 + L1MC1 LINE L1 5605 6333 0 206 374 0 0 chr10 8822539 8822630 -136766658 + (TATATG)n Simple_repeat Simple_repeat 4 94 0 300 359 49 0 chr10 8823499 8823641 -136765647 - MIR SINE MIR 0 262 114 2350 113 0 0 chr10 8823693 8824003 -136765285 - AluSx SINE Alu -2 310 1 615 335 35 19 chr10 8824188 8824445 -136764843 + MIR SINE MIR 2 262 0 350 115 16 0 chr10 8825017 8825078 -136764210 + (TTCC)n Simple_repeat Simple_repeat 2 63 0 1112 82 6 22 chr10 8825092 8825274 -136764014 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 326 286 22 0 chr10 8825282 8825373 -136763915 + CT-rich Low_complexity Low_complexity 3 95 0 213 288 17 0 chr10 8827487 8827546 -136761742 + MIR3 SINE MIR 106 165 -43 2282 119 0 0 chr10 8828393 8828686 -136760602 + AluSx SINE Alu 3 295 -17 21 0 0 0 chr10 8829122 8829143 -136760145 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr10 8830787 8830825 -136758463 + AT_rich Low_complexity Low_complexity 1 38 0 33 43 0 0 chr10 8831003 8831050 -136758238 + AT_rich Low_complexity Low_complexity 1 47 0 195 184 0 0 chr10 8833536 8833574 -136755714 + (CA)n Simple_repeat Simple_repeat 1 38 0 212 374 65 9 chr10 8834575 8834682 -136754606 - MIR SINE MIR -103 159 47 1832 197 35 12 chr10 8835371 8835755 -136753533 - MER45B DNA AcHobo -541 1040 667 198 0 0 0 chr10 8835755 8835777 -136753511 + (TA)n Simple_repeat Simple_repeat 2 23 0 2241 70 0 0 chr10 8835777 8836047 -136753241 - AluSg SINE Alu -17 293 24 1832 197 35 12 chr10 8836047 8836083 -136753205 - MER45B DNA AcHobo -913 668 609 1108 264 71 10 chr10 8836079 8836390 -136752898 - MER45B DNA AcHobo -710 330 1 * 2148 100 0 7 chr10 8836675 8836954 -136752334 + AluSq SINE Alu 1 277 -36 375 23 0 0 chr10 8836955 8836999 -136752289 + (TAA)n Simple_repeat Simple_repeat 1 44 0 1984 158 0 0 chr10 8837014 8837318 -136751970 + AluJb SINE Alu 9 312 0 484 263 0 8 chr10 8837772 8837890 -136751398 - MIR SINE MIR -10 252 136 336 222 111 46 chr10 8837887 8837970 -136751318 + MIR SINE MIR 18 111 -151 * 2594 107 3 8 chr10 8837970 8838336 -136750952 - THE1B LTR MaLR 0 364 1 336 222 111 46 chr10 8838336 8838360 -136750928 + MIR SINE MIR 111 132 -130 22 0 0 0 chr10 8838750 8838772 -136750516 + AT_rich Low_complexity Low_complexity 1 22 0 198 361 165 0 chr10 8838778 8838875 -136750413 + MIR SINE MIR 33 145 -63 1042 159 107 83 chr10 8839544 8839871 -136749417 + MSTB1 LTR MaLR 3 337 -95 373 41 0 0 chr10 8839871 8839920 -136749368 - MADE1 DNA Mariner 0 80 32 25 0 0 0 chr10 8840006 8840031 -136749257 + AT_rich Low_complexity Low_complexity 1 25 0 2372 78 0 29 chr10 8840035 8840342 -136748946 + AluSx SINE Alu 1 298 -14 803 366 62 14 chr10 8840992 8841429 -136747859 - L3 LINE CR1 -967 610 153 466 282 38 132 chr10 8841633 8842027 -136747261 - L2 LINE L2 -54 3218 2862 344 264 99 19 chr10 8843504 8843825 -136745463 + L1M4c LINE L1 1370 1882 -4621 1830 289 52 25 chr10 8844160 8845182 -136744106 + L1ME3A LINE L1 1114 2163 -4233 1529 191 66 3 chr10 8845182 8845470 -136743818 + AluJo SINE Alu 1 306 -6 1205 125 0 17 chr10 8845470 8845646 -136743642 + AluSg/x SINE Alu 132 304 -6 2157 266 43 55 chr10 8845648 8847129 -136742159 + L1ME3A LINE L1 2152 3574 -2641 557 253 43 6 chr10 8847128 8847290 -136741998 + L1ME3A LINE L1 4074 4241 -1974 * 456 171 178 79 chr10 8847332 8847484 -136741804 - MLT1B LTR MaLR -223 167 1 21 0 0 0 chr10 8847528 8847549 -136741739 + AT_rich Low_complexity Low_complexity 1 21 0 4473 59 2 0 chr10 8847559 8848118 -136741170 + L1PA7 LINE L1 5591 6150 -4 2653 216 36 43 chr10 8848121 8848425 -136740863 + L1ME1 LINE L1 5189 5493 -673 1301 192 123 18 chr10 8848425 8848701 -136740587 + AluJb SINE Alu 1 305 -7 2653 216 36 43 chr10 8848701 8849336 -136739952 + L1ME1 LINE L1 5493 6122 -44 373 283 92 6 chr10 8849432 8849605 -136739683 + L1ME3A LINE L1 4401 4588 -1627 276 91 0 0 chr10 8849658 8849702 -136739586 + (TG)n Simple_repeat Simple_repeat 1 44 0 776 270 97 58 chr10 8849769 8849863 -136739425 + L1ME3A LINE L1 4765 4854 -1385 2535 108 5 24 chr10 8849863 8850232 -136739056 - THE1B LTR MaLR 0 364 3 776 270 97 58 chr10 8850232 8851338 -136737950 + L1ME3A LINE L1 4854 6018 -221 234 0 0 0 chr10 8851608 8851634 -136737654 + (T)n Simple_repeat Simple_repeat 1 26 0 237 329 120 19 chr10 8852105 8852263 -136737025 + MIR SINE MIR 28 201 -61 2288 118 0 0 chr10 8853717 8854021 -136735267 - AluSg SINE Alu -6 304 1 848 148 8 0 chr10 8854039 8854161 -136735127 - FLAM_C SINE Alu -19 124 2 470 291 114 29 chr10 8855767 8855977 -136733311 - MIR SINE MIR -13 249 22 531 339 15 0 chr10 8856814 8857009 -136732279 + MIR SINE MIR 63 260 -2 222 160 20 20 chr10 8857265 8857315 -136731973 + GA-rich Low_complexity Low_complexity 2 51 0 180 261 22 0 chr10 8860543 8860589 -136728699 + L2 LINE L2 3263 3309 -4 * 267 305 23 69 chr10 8860582 8860713 -136728575 - MIR SINE MIR -73 189 65 2225 105 7 0 chr10 8862018 8862313 -136726975 - AluSx SINE Alu -15 297 1 414 325 48 48 chr10 8862372 8862560 -136726728 - MER5A DNA MER1_type -1 188 1 28 48 0 0 chr10 8864240 8864282 -136725006 + AT_rich Low_complexity Low_complexity 1 42 0 2077 124 0 0 chr10 8864284 8864591 -136724697 + AluSx SINE Alu 1 307 0 354 296 21 21 chr10 8864591 8864733 -136724555 + MIR SINE MIR 121 262 0 747 250 44 44 chr10 8865326 8865574 -136723714 + MIR SINE MIR 14 261 -1 2233 124 0 0 chr10 8865782 8866088 -136723200 - AluSx SINE Alu -6 306 1 489 34 0 0 chr10 8866648 8866707 -136722581 + (TTTC)n Simple_repeat Simple_repeat 3 61 0 2220 113 7 0 chr10 8867334 8867662 -136721626 - AluSc SINE Alu 0 336 7 1319 160 48 72 chr10 8867825 8868073 -136721215 + MER33 DNA MER1_type 2 242 -2343 3539 87 16 0 chr10 8868073 8868565 -136720723 - L1PA8 LINE L1 -13 6159 5660 1319 160 48 72 chr10 8868565 8868647 -136720641 + MER33 DNA MER1_type 242 324 0 217 154 26 0 chr10 8869007 8869046 -136720242 + GA-rich Low_complexity Low_complexity 1 40 0 29 0 0 0 chr10 8869234 8869263 -136720025 + AT_rich Low_complexity Low_complexity 1 29 0 2129 142 0 0 chr10 8869263 8869558 -136719730 + AluSg SINE Alu 1 295 -15 732 200 0 0 chr10 8869572 8869692 -136719596 - FLAM_C SINE Alu -23 120 1 22 0 0 0 chr10 8870716 8870738 -136718550 + AT_rich Low_complexity Low_complexity 1 22 0 260 331 65 48 chr10 8871205 8871329 -136717959 + MIR SINE MIR 20 145 -63 197 372 141 26 chr10 8871416 8871983 -136717305 - L2 LINE L2 -411 2903 2272 3192 173 28 11 chr10 8872075 8872721 -136716567 + L1MB8 LINE L1 5520 6176 -2 234 282 48 24 chr10 8872809 8872933 -136716355 + L1MEd LINE L1 2 128 -5991 720 307 115 38 chr10 8873052 8873573 -136715715 + L1MEd LINE L1 260 820 -5299 493 290 12 35 chr10 8873838 8874007 -136715281 + MIR SINE MIR 20 184 -78 341 316 95 6 chr10 8874118 8874276 -136715012 + LTR16A LTR ERVL 111 282 -168 1029 161 71 14 chr10 8875921 8876132 -136713156 + AluJb SINE Alu 90 312 0 232 271 43 0 chr10 8876864 8876934 -136712354 - MIR SINE MIR -188 74 2 632 263 75 42 chr10 8877002 8877215 -136712073 - MIR SINE MIR -33 229 10 186 304 0 0 chr10 8877234 8877280 -136712008 - L3 LINE CR1 -12 1565 1520 228 355 0 11 chr10 8877281 8877374 -136711914 - MIR SINE MIR -118 144 53 1746 148 4 11 chr10 8877593 8877870 -136711418 + AluSx SINE Alu 1 275 -37 1117 56 25 0 chr10 8877875 8878035 -136711253 + (GAAA)n Simple_repeat Simple_repeat 2 165 0 267 103 0 0 chr10 8878035 8878074 -136711214 + (CAGG)n Simple_repeat Simple_repeat 1 39 0 198 299 51 43 chr10 8879585 8879702 -136709586 - L2 LINE L2 -6 3307 3190 486 311 33 0 chr10 8880182 8880365 -136708923 + MER5A DNA MER1_type 1 189 0 2522 90 11 25 chr10 8880889 8881254 -136708034 - THE1B LTR MaLR -4 360 1 2342 154 16 102 chr10 8881312 8881812 -136707476 - LTR32 LTR ERVL 0 471 15 23 0 0 0 chr10 8883043 8883066 -136706222 + AT_rich Low_complexity Low_complexity 1 23 0 1911 147 27 0 chr10 8884725 8885018 -136704270 - AluJb SINE Alu -11 301 1 209 358 63 21 chr10 8885297 8885392 -136703896 - L2 LINE L2 -33 3280 3182 244 274 16 24 chr10 8885409 8885533 -136703755 + (TA)n Simple_repeat Simple_repeat 2 124 0 26 88 0 0 chr10 8885930 8885998 -136703290 + AT_rich Low_complexity Low_complexity 1 68 0 806 181 0 0 chr10 8886025 8886158 -136703130 - FLAM_C SINE Alu 0 133 1 426 144 0 44 chr10 8886195 8886285 -136703003 + MER53 DNA DNA 102 187 -2 221 315 63 55 chr10 8886398 8886525 -136702763 - MIR SINE MIR -132 130 3 450 224 13 90 chr10 8886871 8887027 -136702261 - MIR SINE MIR -48 214 71 181 200 0 0 chr10 8887165 8887200 -136702088 + MIR SINE MIR 73 107 -155 26 30 0 0 chr10 8888029 8888062 -136701226 + AT_rich Low_complexity Low_complexity 1 33 0 198 307 50 40 chr10 8890269 8890370 -136698918 + MIR SINE MIR 44 145 -117 550 133 80 44 chr10 8891563 8891676 -136697612 - FLAM_C SINE Alu -26 117 1 5285 138 25 7 chr10 8893125 8893970 -136695318 + L1PB4 LINE L1 4934 5811 -345 327 25 0 0 chr10 8893970 8894010 -136695278 + (CA)n Simple_repeat Simple_repeat 2 41 0 5285 138 25 7 chr10 8894010 8894355 -136694933 + L1PB4 LINE L1 5811 6148 -8 229 317 64 94 chr10 8894756 8895084 -136694204 + L2 LINE L2 2874 3191 -81 632 216 26 0 chr10 8895287 8895403 -136693885 - 5S rRNA rRNA -2 119 1 22 0 0 0 chr10 8895602 8895624 -136693664 + AT_rich Low_complexity Low_complexity 1 22 0 422 274 102 97 chr10 8895666 8896560 -136692728 - HAL1b LINE L1 -37 1311 414 22 0 0 0 chr10 8897123 8897145 -136692143 + AT_rich Low_complexity Low_complexity 1 22 0 207 0 0 0 chr10 8897908 8897931 -136691357 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 2027 101 11 14 chr10 8897933 8898209 -136691079 - AluSx SINE Alu -31 281 7 320 327 74 0 chr10 8898487 8898649 -136690639 + L1ME LINE L1 5629 5802 -319 409 253 12 0 chr10 8899786 8899948 -136689340 + (TA)n Simple_repeat Simple_repeat 2 165 0 2218 110 6 0 chr10 8899948 8900276 -136689012 + L1P5 LINE L1 5419 5748 -408 225 222 0 0 chr10 8900282 8900327 -136688961 - L1MC4 LINE L1 -1339 6703 6659 471 113 0 0 chr10 8900332 8900403 -136688885 + (CA)n Simple_repeat Simple_repeat 2 72 0 1953 154 0 3 chr10 8902444 8902756 -136686532 - AluSx SINE Alu -1 311 1 22 94 0 0 chr10 8903332 8903396 -136685892 + AT_rich Low_complexity Low_complexity 1 64 0 224 301 36 12 chr10 8903799 8903882 -136685406 - L2 LINE L2 -212 3060 2976 288 263 0 50 chr10 8903986 8904085 -136685203 - MIR SINE MIR -51 211 118 219 156 0 78 chr10 8904417 8904481 -136684807 + A-rich Low_complexity Low_complexity 2 60 0 441 0 0 0 chr10 8905339 8905388 -136683900 + (CA)n Simple_repeat Simple_repeat 2 50 0 1929 144 18 0 chr10 8905408 8905685 -136683603 - AluSx SINE Alu -30 282 1 240 357 57 21 chr10 8905785 8905925 -136683363 - L2 LINE L2 -2 3311 3167 376 316 58 23 chr10 8906084 8906258 -136683030 - MIR SINE MIR -20 242 63 1447 192 106 32 chr10 8906426 8906795 -136682493 - MLT1F LTR MaLR -4 538 143 1880 123 75 34 chr10 8906819 8907177 -136682111 - THE1C LTR MaLR -2 373 1 727 242 0 0 chr10 8909499 8909660 -136679628 - L1PB4 LINE L1 -2 6154 5994 249 57 0 0 chr10 8909721 8909756 -136679532 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 29 28 0 0 chr10 8909801 8909837 -136679451 + AT_rich Low_complexity Low_complexity 1 36 0 485 247 50 119 chr10 8910789 8911033 -136678255 - MLT1A1 LTR MaLR -3 587 312 1100 145 21 21 chr10 8911061 8911254 -136678034 - MLT1A1 LTR MaLR -171 194 2 668 113 19 0 chr10 8911254 8911360 -136677928 + L1MB7 LINE L1 6069 6176 -8 375 160 32 43 chr10 8911361 8911455 -136677833 + Charlie5 DNA MER1_type 2523 2615 0 25 31 0 0 chr10 8912025 8912057 -136677231 + AT_rich Low_complexity Low_complexity 1 32 0 205 200 0 0 chr10 8912343 8912383 -136676905 + T-rich Low_complexity Low_complexity 1 40 0 1572 85 4 17 chr10 8912451 8912686 -136676602 - L1MA2 LINE L1 0 6304 6073 25 0 0 0 chr10 8913131 8913156 -136676132 + AT_rich Low_complexity Low_complexity 1 25 0 1895 152 37 37 chr10 8914486 8914861 -136674427 - THE1C LTR MaLR 0 375 1 426 300 8 8 chr10 8915437 8915567 -136673721 + MLT1L LTR MaLR 24 153 -462 617 281 88 12 chr10 8915570 8915741 -136673547 + MER5A DNA MER1_type 2 185 -4 1098 288 47 32 chr10 8915741 8916206 -136673082 + MLT1L LTR MaLR 144 615 0 315 0 0 0 chr10 8917049 8917084 -136672204 + (TTTA)n Simple_repeat Simple_repeat 1 35 0 989 113 78 0 chr10 8917084 8917225 -136672063 - AluSp SINE Alu -32 281 130 267 54 0 0 chr10 8917348 8917385 -136671903 + (T)n Simple_repeat Simple_repeat 1 37 0 966 106 8 0 chr10 8917385 8917517 -136671771 - AluSp SINE Alu -180 133 1 267 41 61 0 chr10 8917811 8917860 -136671428 + (TA)n Simple_repeat Simple_repeat 1 52 0 3529 151 27 5 chr10 8917888 8918150 -136671138 + L1PB4 LINE L1 5520 5775 -381 234 62 0 0 chr10 8918150 8918182 -136671106 + (CA)n Simple_repeat Simple_repeat 2 33 0 3529 151 27 5 chr10 8918182 8918541 -136670747 + L1PB4 LINE L1 5775 6155 -1 516 125 0 0 chr10 8918623 8918703 -136670585 + MADE1 DNA Mariner 1 80 0 236 301 43 32 chr10 8919381 8919474 -136669814 - MIR SINE MIR -15 247 154 1155 77 6 22 chr10 8919984 8920167 -136669121 + (TTC)n Simple_repeat Simple_repeat 1 180 0 610 169 22 0 chr10 8920167 8920303 -136668985 + CT-rich Low_complexity Low_complexity 4 142 0 1750 136 4 0 chr10 8920320 8920571 -136668717 - AluSp SINE Alu -23 290 39 192 125 0 0 chr10 8921096 8921128 -136668160 + (TAA)n Simple_repeat Simple_repeat 2 33 0 329 280 75 0 chr10 8921134 8921227 -136668061 - MIR SINE MIR -3 259 160 501 250 30 18 chr10 8922922 8923090 -136666198 - MER96B DNA MER1_type? -247 170 1 200 184 20 0 chr10 8923170 8923219 -136666069 + GA-rich Low_complexity Low_complexity 3 52 0 1144 62 0 0 chr10 8923262 8923408 -136665880 - L1P3 LINE L1 -595 5559 5414 3871 71 4 2 chr10 8923408 8923915 -136665373 + L1PA7 LINE L1 5627 6135 -19 1610 192 0 19 chr10 8924978 8925286 -136664002 - AluJo SINE Alu -10 302 1 2180 114 0 16 chr10 8926169 8926476 -136662812 + AluSx SINE Alu 1 302 -10 263 286 26 13 chr10 8928063 8928140 -136661148 + MIR SINE MIR 18 95 -167 243 358 36 21 chr10 8928197 8928390 -136660898 + L2 LINE L2 3118 3313 0 2379 38 7 3 chr10 8928561 8928854 -136660434 - L1PA4 LINE L1 0 6155 5862 357 211 103 51 chr10 8928854 8928951 -136660337 - FLAM_A SINE Alu -31 102 22 22 70 0 0 chr10 8929102 8929145 -136660143 + AT_rich Low_complexity Low_complexity 1 43 0 21 0 0 0 chr10 8929977 8929998 -136659290 + AT_rich Low_complexity Low_complexity 1 21 0 974 278 45 42 chr10 8930072 8930453 -136658835 + L1ME LINE L1 3 384 -5686 388 91 152 0 chr10 8931046 8931112 -136658176 + MADE1 DNA Mariner 5 80 0 409 260 179 36 chr10 8931507 8931703 -136657585 + MIR SINE MIR 13 236 -26 271 266 89 57 chr10 8931718 8931842 -136657446 - MIR SINE MIR -25 237 110 3555 77 30 10 chr10 8932267 8932774 -136656514 + L1PA13 LINE L1 5646 6162 -1 2206 123 0 0 chr10 8933780 8934082 -136655206 + AluSx SINE Alu 1 302 -10 242 217 22 0 chr10 8934366 8934412 -136654876 + AluJ/monomer SINE Alu 1 47 -256 2090 126 0 0 chr10 8934931 8935224 -136654064 + AluSc SINE Alu 1 293 -16 341 378 25 51 chr10 8935456 8935771 -136653517 - L2 LINE L2 0 3272 2966 2390 88 0 0 chr10 8938055 8938352 -136650936 + AluSg SINE Alu 1 297 -13 322 236 113 0 chr10 8938661 8938767 -136650521 - L1ME4a LINE L1 -1 6120 6003 366 316 23 0 chr10 8938962 8939136 -136650152 - L1ME4a LINE L1 -237 5884 5707 249 269 39 58 chr10 8939149 8939253 -136650035 + L2 LINE L2 3212 3313 0 228 241 0 0 chr10 8939278 8939332 -136649956 - L1ME4a LINE L1 -461 5660 5607 37 0 0 0 chr10 8939543 8939580 -136649708 + AT_rich Low_complexity Low_complexity 1 37 0 507 270 167 15 chr10 8939811 8940015 -136649273 + MIR SINE MIR 12 246 -16 207 0 0 0 chr10 8941994 8942017 -136647271 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 446 327 32 46 chr10 8942290 8942507 -136646781 + MIR SINE MIR 48 261 -1 1788 72 42 0 chr10 8942969 8943206 -136646082 - L1P4 LINE L1 -448 5713 5467 2145 101 3 0 chr10 8943210 8943520 -136645768 + AluSg SINE Alu 1 311 0 2286 124 3 3 chr10 8943522 8943876 -136645412 + L1PA14 LINE L1 5806 6159 -2 339 169 0 0 chr10 8944012 8944088 -136645200 - AluS SINE Alu -239 61 2 1509 193 3 0 chr10 8944088 8944404 -136644884 - L1M4 LINE L1 -1689 5478 5162 418 288 122 14 chr10 8944468 8944778 -136644510 - L1ME4a LINE L1 -755 5391 5143 381 318 69 11 chr10 8946004 8946240 -136643048 + MLT1J2 LTR MaLR 1 210 -240 841 369 109 3 chr10 8946535 8947168 -136642120 - L2 LINE L2 0 3313 2614 327 332 117 19 chr10 8947157 8947362 -136641926 + MIR SINE MIR 29 253 -9 * 480 301 81 35 chr10 8947716 8947889 -136641399 - MIR SINE MIR -48 214 34 7710 209 41 18 chr10 8947898 8948813 -136640475 - L1M4 LINE L1 -1953 5214 4322 441 36 0 0 chr10 8948813 8948868 -136640420 + (TG)n Simple_repeat Simple_repeat 1 55 0 1663 176 0 47 chr10 8948869 8949165 -136640123 - AluJo SINE Alu -30 282 1 7710 209 41 18 chr10 8949165 8950182 -136639106 - L1M4 LINE L1 -2844 4323 3235 225 0 0 0 chr10 8950236 8950261 -136639027 + (TG)n Simple_repeat Simple_repeat 2 26 0 1638 127 0 4 chr10 8950285 8950521 -136638767 - AluSx SINE Alu -77 235 1 3103 266 54 17 chr10 8950532 8952378 -136636910 - L1M4 LINE L1 -3944 3223 1614 499 261 67 0 chr10 8953343 8953462 -136635826 - FLAM_A SINE Alu -6 127 1 265 204 0 0 chr10 8954574 8954623 -136634665 - MIR3 SINE MIR -6 202 154 1968 121 0 16 chr10 8954784 8955098 -136634190 - L1PA13 LINE L1 -1 6162 5854 402 183 11 32 chr10 8955098 8955191 -136634097 - THE1C LTR MaLR 0 428 338 1315 141 65 43 chr10 8955296 8955573 -136633715 - THE1C LTR MaLR -91 284 2 392 154 0 0 chr10 8955574 8955639 -136633649 - L1PA13 LINE L1 -305 5858 5794 1849 149 21 0 chr10 8955641 8955929 -136633359 - AluJb SINE Alu -18 294 1 21 0 0 0 chr10 8956275 8956296 -136632992 + AT_rich Low_complexity Low_complexity 1 21 0 2170 229 105 28 chr10 8957281 8957331 -136631957 - MLT1E1 LTR MaLR 0 654 609 2825 130 16 5 chr10 8957331 8957754 -136631534 + MSTA LTR MaLR 1 428 0 2170 229 105 28 chr10 8957754 8958310 -136630978 - MLT1E1 LTR MaLR -45 609 1 206 116 23 0 chr10 8960127 8960170 -136629118 + CT-rich Low_complexity Low_complexity 1 44 0 732 199 76 28 chr10 8960211 8960462 -136628826 + MER114 LTR ERV 235 497 -151 387 0 0 0 chr10 8960732 8960775 -136628513 + (TG)n Simple_repeat Simple_repeat 2 44 0 288 214 0 0 chr10 8961811 8961867 -136627421 + MER94 DNA DNA 75 130 -4 664 333 59 71 chr10 8961877 8962453 -136626835 + MLT1K LTR MaLR 2 570 -18 2881 9 0 0 chr10 8962807 8963125 -136626163 - AluYb8 SINE Alu 0 318 1 389 283 145 0 chr10 8963227 8963372 -136625916 + MIR SINE MIR 74 239 -23 5759 67 0 0 chr10 8963594 8964357 -136624931 - L1PA6 LINE L1 -991 5155 4393 6982 51 5 5 chr10 8964357 8965349 -136623939 + L1PA6 LINE L1 5148 6136 -18 1973 150 10 0 chr10 8965911 8966218 -136623070 - AluJb SINE Alu -2 310 1 720 275 29 35 chr10 8966484 8966713 -136622575 + MIR SINE MIR 22 249 -13 223 263 53 0 chr10 8966912 8966969 -136622319 + MIR3 SINE MIR 113 172 -36 858 136 0 0 chr10 8967219 8967351 -136621937 - L1MA2 LINE L1 -1 6303 6172 1584 159 32 2 chr10 8967915 8968306 -136620982 - L1MA7 LINE L1 -1 6290 5782 246 32 0 0 chr10 8968307 8968338 -136620950 + (CA)n Simple_repeat Simple_repeat 2 32 0 268 196 20 0 chr10 8968338 8968389 -136620899 + L1M2 LINE L1 5647 5698 -593 247 130 0 0 chr10 8968459 8968505 -136620783 + LTR66 LTR ERVL 394 439 -171 314 326 0 0 chr10 8968520 8968609 -136620679 - L1MC4 LINE L1 -1340 6702 6614 * 349 292 0 0 chr10 8968530 8968619 -136620669 + L1MC4 LINE L1 6615 6703 -1339 697 206 21 21 chr10 8969055 8969244 -136620044 - MER53 DNA DNA 0 189 1 288 0 0 0 chr10 8969771 8969803 -136619485 + (CA)n Simple_repeat Simple_repeat 1 32 0 2036 129 0 3 chr10 8970243 8970537 -136618751 + AluSx SINE Alu 1 293 -19 969 192 34 24 chr10 8970848 8971056 -136618232 - MER6B DNA MER2_type 0 210 1 2107 108 0 9 chr10 8971085 8971400 -136617888 - L1PB1 LINE L1 -7 6144 5833 221 379 21 0 chr10 8971529 8971624 -136617664 - MIR SINE MIR -69 139 43 220 276 5 0 chr10 8972171 8972226 -136617062 + MIR SINE MIR 43 100 -108 423 346 33 40 chr10 8975245 8975517 -136613771 + L1ME LINE L1 46 315 -5755 684 180 66 0 chr10 8975570 8975692 -136613596 - FLAM_A SINE Alu 0 133 4 404 244 40 49 chr10 8975991 8976216 -136613072 + L1ME LINE L1 526 748 -5322 236 100 0 20 chr10 8976453 8976503 -136612785 + (CAAA)n Simple_repeat Simple_repeat 2 50 0 23 33 0 0 chr10 8977428 8977458 -136611830 + AT_rich Low_complexity Low_complexity 1 30 0 1741 138 0 0 chr10 8977460 8977714 -136611574 + AluSx SINE Alu 3 256 -56 189 0 0 0 chr10 8978699 8978720 -136610568 + (TTA)n Simple_repeat Simple_repeat 2 22 0 2106 104 0 10 chr10 8978722 8979011 -136610277 - AluY SINE Alu -23 288 3 444 305 69 42 chr10 8979266 8979528 -136609760 - MER102b DNA MER1_type -19 322 54 21 36 0 0 chr10 8980013 8980041 -136609247 + AT_rich Low_complexity Low_complexity 1 28 0 288 0 0 0 chr10 8980867 8980899 -136608389 + (CAAAAA)n Simple_repeat Simple_repeat 4 35 0 212 302 93 35 chr10 8980911 8980997 -136608291 + MIR3 SINE MIR 115 205 -3 1741 91 4 0 chr10 8981688 8981918 -136607370 + AluSq SINE Alu 73 303 -10 2447 50 0 3 chr10 8982099 8982399 -136606889 - AluY SINE Alu -12 299 1 362 340 92 57 chr10 8983590 8983629 -136605659 + L1MEd LINE L1 375 411 -5794 4598 89 1 15 chr10 8983629 8984292 -136604996 + L1PA10 LINE L1 5514 6167 -1 362 340 92 57 chr10 8984292 8984708 -136604580 + L1MEd LINE L1 411 846 -5359 24 0 0 0 chr10 8984954 8984978 -136604310 + AT_rich Low_complexity Low_complexity 1 24 0 239 263 150 0 chr10 8985070 8985150 -136604138 - MLT1D-int LTR MaLR -274 1097 1006 828 275 34 0 chr10 8985364 8985571 -136603717 - MLT1D-int LTR MaLR -493 878 665 1941 239 39 41 chr10 8985620 8986255 -136603033 - MLT1D-int LTR MaLR -711 660 27 260 188 0 0 chr10 8986264 8986312 -136602976 - MLT1D-int LTR MaLR -1323 48 1 * 2066 217 58 6 chr10 8986312 8986792 -136602496 - MLT1D LTR MaLR 0 505 1 447 285 62 7 chr10 8986792 8987056 -136602232 + L1MEd LINE L1 2112 2393 -4003 274 265 103 0 chr10 8987030 8987166 -136602122 + L1MEd LINE L1 2204 2353 -3862 * 543 275 103 31 chr10 8987140 8987500 -136601788 + L1MEd LINE L1 2204 2589 -3626 394 264 42 36 chr10 8987477 8987670 -136601618 + L1ME3A LINE L1 1455 1648 -4748 * 198 71 0 0 chr10 8987696 8987724 -136601564 + (TG)n Simple_repeat Simple_repeat 1 28 0 317 265 100 29 chr10 8987854 8988024 -136601264 + L1ME3A LINE L1 3759 3940 -2275 333 303 179 6 chr10 8988027 8988189 -136601099 + MLT1J1 LTR MaLR 13 202 -244 1119 286 26 47 chr10 8989002 8989659 -136599629 + L1ME3A LINE L1 4694 5336 -879 192 179 0 0 chr10 8989702 8989741 -136599547 + (TA)n Simple_repeat Simple_repeat 2 40 0 549 313 61 16 chr10 8989763 8990073 -136599215 + L1ME3A LINE L1 5383 5706 -527 180 0 0 0 chr10 8990077 8990097 -136599191 + (TG)n Simple_repeat Simple_repeat 2 21 0 283 191 55 9 chr10 8990108 8990218 -136599070 + (TA)n Simple_repeat Simple_repeat 1 115 0 623 260 23 6 chr10 8990235 8990412 -136598876 + L1ME3A LINE L1 5759 5938 -301 480 235 43 9 chr10 8990771 8990886 -136598402 - MER20 DNA MER1_type -4 215 97 253 254 0 15 chr10 8991402 8991469 -136597819 + CT-rich Low_complexity Low_complexity 1 66 0 237 386 101 6 chr10 8991922 8992080 -136597208 + MIR SINE MIR 39 211 -51 321 26 0 0 chr10 8992623 8992661 -136596627 + (TG)n Simple_repeat Simple_repeat 1 38 0 23 0 0 0 chr10 8994982 8995005 -136594283 + AT_rich Low_complexity Low_complexity 1 23 0 26 64 0 0 chr10 8996914 8996961 -136592327 + AT_rich Low_complexity Low_complexity 1 47 0 26 74 0 0 chr10 8999360 8999414 -136589874 + AT_rich Low_complexity Low_complexity 1 54 0 25 51 0 0 chr10 8999459 8999498 -136589790 + AT_rich Low_complexity Low_complexity 1 39 0 583 292 71 40 chr10 9000004 9000230 -136589058 - MIR SINE MIR 0 262 30 285 167 0 0 chr10 9002628 9002682 -136586606 + (TG)n Simple_repeat Simple_repeat 1 54 0 222 37 0 0 chr10 9004272 9004299 -136584989 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1946 132 6 10 chr10 9004732 9005043 -136584245 - AluSg SINE Alu 0 310 1 245 323 42 31 chr10 9005601 9005697 -136583591 - MIR SINE MIR -62 146 50 468 0 0 0 chr10 9005928 9005980 -136583308 + (TTA)n Simple_repeat Simple_repeat 3 54 0 934 94 0 0 chr10 9005980 9006107 -136583181 - L1PA7 LINE L1 -18 6136 6010 243 334 57 34 chr10 9010136 9010573 -136578715 + L1MEd LINE L1 519 965 -5154 486 317 68 100 chr10 9010840 9011358 -136577930 + L1MEd LINE L1 333 833 -5286 1957 230 65 8 chr10 9011359 9011851 -136577437 - MLT2B1 LTR ERVL 0 520 1 446 300 39 58 chr10 9011938 9012603 -136576685 + L1MEd LINE L1 925 1616 -874 513 301 14 0 chr10 9012604 9012750 -136576538 - MLT1H LTR MaLR -315 234 87 2191 121 3 3 chr10 9012890 9013195 -136576093 + AluY SINE Alu 1 305 -6 349 286 106 5 chr10 9013196 9013385 -136575903 + L1ME3A LINE L1 5730 5937 -233 302 277 138 31 chr10 9013633 9013924 -136575364 + L1ME LINE L1 5463 5588 -533 38 51 0 0 chr10 9015124 9015183 -136574105 + AT_rich Low_complexity Low_complexity 1 59 0 338 295 47 31 chr10 9015762 9015891 -136573397 + MIR SINE MIR 129 259 -3 657 102 0 0 chr10 9015922 9016020 -136573268 - AluY SINE Alu -12 299 202 2010 80 0 28 chr10 9016177 9016464 -136572824 - L1PA13 LINE L1 -11 6152 5874 1239 63 0 0 chr10 9016464 9016622 -136572666 + L1P4 LINE L1 5649 5806 -362 666 173 126 136 chr10 9017428 9017456 -136571832 - L1M4 LINE L1 -1792 4852 4825 225 65 0 0 chr10 9017456 9017487 -136571801 + (TA)n Simple_repeat Simple_repeat 1 31 0 666 173 126 136 chr10 9017487 9017759 -136571529 - L1M4 LINE L1 -1819 4825 4555 1544 231 29 21 chr10 9017775 9017905 -136571383 + MLT2C1 LTR ERVL 3 130 -267 1530 96 50 0 chr10 9017905 9018123 -136571165 - MER30 DNA MER1_type 0 230 2 1544 231 29 21 chr10 9018123 9018378 -136570910 + MLT2C1 LTR ERVL 130 391 -6 2282 248 56 20 chr10 9018386 9019175 -136570113 - L1M4 LINE L1 -2105 4539 3723 1441 156 86 78 chr10 9019465 9019837 -136569451 - THE1C LTR MaLR 0 375 1 554 258 66 56 chr10 9019888 9020175 -136569113 - L1M4 LINE L1 -6229 313 24 365 197 2 0 chr10 9020177 9020248 -136569040 + MLT1H1 LTR MaLR 476 553 -2 584 282 115 16 chr10 9020400 9020723 -136568565 + MER20B DNA MER1_type 406 760 -23 2359 102 0 0 chr10 9020752 9021055 -136568233 - AluSc SINE Alu -6 303 1 2330 11 0 0 chr10 9021247 9021512 -136567776 - L1PA2 LINE L1 0 6155 5891 2087 125 0 3 chr10 9021831 9022154 -136567134 + AluSq SINE Alu 1 322 0 291 312 186 10 chr10 9022255 9022652 -136566636 - LTR33 LTR ERVL -36 485 19 1688 171 54 6 chr10 9022965 9023281 -136566007 - MER7A DNA MER2_type -17 329 1 1150 273 85 65 chr10 9025817 9026382 -136562906 - L1ME3A LINE L1 -11 6159 5584 195 42 0 0 chr10 9027814 9027838 -136561450 + (TGAA)n Simple_repeat Simple_repeat 3 26 0 1111 231 148 13 chr10 9028071 9028374 -136560914 + MER2 DNA MER2_type 2 345 0 503 115 0 0 chr10 9028389 9028467 -136560821 + MADE1 DNA Mariner 1 78 -2 441 278 87 76 chr10 9028527 9029005 -136560283 - L2 LINE L2 -224 3089 2581 1981 136 0 14 chr10 9029005 9029331 -136559957 - AluSx SINE Alu 0 322 1 441 278 87 76 chr10 9029331 9029386 -136559902 - L2 LINE L2 -732 2581 2528 2197 119 0 3 chr10 9029393 9029695 -136559593 - AluSq SINE Alu -12 301 1 425 244 15 15 chr10 9029779 9029910 -136559378 + LTR33 LTR ERVL 388 518 -3 249 227 121 0 chr10 9029913 9029979 -136559309 + L2 LINE L2 3199 3272 0 4213 67 5 2 chr10 9030530 9031082 -136558206 + MER41A LTR ERV1 1 554 0 255 61 0 0 chr10 9031581 9031614 -136557674 + (GGAA)n Simple_repeat Simple_repeat 4 36 0 580 188 27 0 chr10 9031700 9031883 -136557405 + L1PA16 LINE L1 5936 6158 -8 23 33 0 0 chr10 9031883 9031913 -136557375 + AT_rich Low_complexity Low_complexity 1 30 0 499 204 10 0 chr10 9032575 9032673 -136556615 - LTR9 LTR ERV1 0 612 514 2870 159 12 55 chr10 9032921 9033499 -136555789 - LTR9 LTR ERV1 -57 555 3 2938 279 63 23 chr10 9034683 9036037 -136553251 + L1ME1 LINE L1 34 1442 -4954 1608 210 108 50 chr10 9036083 9036603 -136552685 - MLT1E1 LTR MaLR -10 644 95 2628 248 76 61 chr10 9036699 9038002 -136551286 + L1ME1 LINE L1 3690 5012 -1203 2193 260 40 12 chr10 9037993 9038784 -136550504 + L1ME1 LINE L1 5347 6223 -12 * 237 270 16 0 chr10 9039109 9039172 -136550116 + L2 LINE L2 3245 3308 -5 297 324 9 9 chr10 9039368 9039473 -136549815 - MIR SINE MIR -39 223 119 5716 136 29 20 chr10 9039503 9039581 -136549707 - L1MA8 LINE L1 0 6291 6215 2158 132 0 0 chr10 9039581 9039884 -136549404 + AluSx SINE Alu 1 303 -9 5716 136 29 20 chr10 9039884 9040905 -136548383 - L1MA8 LINE L1 -76 6215 5183 241 281 52 52 chr10 9042890 9043025 -136546263 - L2 LINE L2 -18 3295 3161 1434 191 44 49 chr10 9043252 9043618 -136545670 + MLT1A1 LTR MaLR 2 365 0 229 171 157 29 chr10 9044070 9044140 -136545148 - L2 LINE L2 -2 3311 3233 24 53 0 0 chr10 9044453 9044491 -136544797 + AT_rich Low_complexity Low_complexity 1 38 0 441 0 0 0 chr10 9044657 9044706 -136544582 + (TG)n Simple_repeat Simple_repeat 2 50 0 198 118 0 0 chr10 9044705 9044739 -136544549 + (TA)n Simple_repeat Simple_repeat 1 34 0 * 245 401 31 0 chr10 9045964 9046082 -136543206 + MIR SINE MIR 46 165 -65 212 328 143 17 chr10 9046097 9046216 -136543072 - MIR SINE MIR -83 179 46 2230 101 3 0 chr10 9046595 9046892 -136542396 + AluSp SINE Alu 1 298 -15 261 83 0 0 chr10 9047481 9047517 -136541771 + (A)n Simple_repeat Simple_repeat 1 36 0 348 24 0 0 chr10 9048354 9048395 -136540893 + (TC)n Simple_repeat Simple_repeat 2 42 0 25 31 0 0 chr10 9048556 9048588 -136540700 + AT_rich Low_complexity Low_complexity 1 32 0 206 32 32 0 chr10 9050473 9050504 -136538784 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 207 0 0 0 chr10 9051547 9051570 -136537718 + (TA)n Simple_repeat Simple_repeat 2 24 0 25 0 0 0 chr10 9051570 9051595 -136537693 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr10 9052316 9052344 -136536944 + AT_rich Low_complexity Low_complexity 1 28 0 29 28 0 0 chr10 9052446 9052482 -136536806 + AT_rich Low_complexity Low_complexity 1 36 0 329 259 89 13 chr10 9053129 9053353 -136535935 + L1M4 LINE L1 2800 3040 -3106 28 48 0 0 chr10 9053468 9053510 -136535778 + AT_rich Low_complexity Low_complexity 1 42 0 405 0 0 0 chr10 9053779 9053824 -136535464 + (TAGA)n Simple_repeat Simple_repeat 2 46 0 2549 61 0 6 chr10 9054240 9054553 -136534735 - AluY SINE Alu 0 311 1 22 0 0 0 chr10 9054564 9054586 -136534702 + AT_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr10 9054896 9054918 -136534370 + (A)n Simple_repeat Simple_repeat 1 22 0 24 0 0 0 chr10 9056290 9056314 -136532974 + AT_rich Low_complexity Low_complexity 1 24 0 225 311 11 0 chr10 9056733 9056823 -136532465 + MIR SINE MIR 120 210 -52 626 226 0 8 chr10 9057072 9057196 -136532092 - FLAM_A SINE Alu -10 123 1 225 347 0 14 chr10 9059724 9059796 -136529492 + MIR SINE MIR 78 148 -60 1580 191 3 27 chr10 9060305 9060603 -136528685 + AluJo SINE Alu 1 291 -21 379 223 45 36 chr10 9060629 9060741 -136528547 - MER112 DNA MER1_type -11 249 137 278 269 36 102 chr10 9061355 9061522 -136527766 + MIR SINE MIR 59 214 -48 2172 167 80 82 chr10 9062112 9062627 -136526661 - MLT2B1 LTR ERVL -1 519 6 395 83 0 0 chr10 9062798 9062858 -136526430 - L1MA3 LINE L1 -4 6301 6242 5084 60 0 6 chr10 9063320 9063972 -136525316 + L1PA8 LINE L1 5521 6168 -4 2363 66 0 13 chr10 9064475 9064778 -136524510 - AluY SINE Alu -12 299 1 24 32 0 0 chr10 9064820 9064851 -136524437 + AT_rich Low_complexity Low_complexity 1 31 0 1001 113 251 0 chr10 9064852 9065055 -136524233 - L1MA3 LINE L1 -1 6304 6051 377 320 96 6 chr10 9065970 9066148 -136523140 + MIR SINE MIR 66 259 -3 976 232 122 41 chr10 9068375 9069012 -136520276 - HAL1 LINE L1 -874 1633 945 474 308 180 31 chr10 9069023 9069572 -136519716 - HAL1 LINE L1 -1729 778 148 2848 202 58 68 chr10 9069740 9070621 -136518667 + L1MB5 LINE L1 5294 6165 -9 1846 118 0 4 chr10 9071340 9071585 -136517703 + AluSq SINE Alu 37 280 -33 225 0 0 0 chr10 9071585 9071610 -136517678 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 33 25 0 0 chr10 9071826 9071866 -136517422 + AT_rich Low_complexity Low_complexity 1 40 0 451 370 106 12 chr10 9071973 9072303 -136516985 - L3 LINE CR1 -18 1559 1199 226 385 113 9 chr10 9072383 9072596 -136516692 - L3 LINE CR1 -839 738 504 22 0 0 0 chr10 9072628 9072650 -136516638 + AT_rich Low_complexity Low_complexity 1 22 0 197 357 14 0 chr10 9072885 9072955 -136516333 - MIR3 SINE MIR -49 159 89 344 238 88 103 chr10 9072966 9073227 -136516061 + L1MEc LINE L1 2076 2332 -4064 263 253 98 55 chr10 9073713 9074112 -136515176 + L1MEc LINE L1 2879 3294 -2921 335 318 56 28 chr10 9074517 9074876 -136514412 + L1MEc LINE L1 3808 4176 -2039 201 153 17 34 chr10 9075433 9075492 -136513796 + A-rich Low_complexity Low_complexity 3 60 0 23 54 0 0 chr10 9075746 9075783 -136513505 + AT_rich Low_complexity Low_complexity 1 37 0 226 345 12 24 chr10 9075836 9075920 -136513368 - MIR SINE MIR -89 119 37 2339 163 16 0 chr10 9076000 9076436 -136512852 + L1MA7 LINE L1 5830 6272 -19 1521 104 62 134 chr10 9077926 9078233 -136511055 - AluSx SINE Alu -17 295 11 2017 136 0 0 chr10 9079645 9079952 -136509336 + AluSq SINE Alu 1 307 0 1408 175 0 0 chr10 9080230 9080453 -136508835 - AluSg/x SINE Alu -8 304 82 186 245 21 11 chr10 9080855 9080949 -136508339 + (TA)n Simple_repeat Simple_repeat 1 95 0 318 312 0 37 chr10 9080955 9081064 -136508224 + L1MC4 LINE L1 6614 6718 -1324 270 310 60 40 chr10 9081153 9081300 -136507988 + MIR SINE MIR 33 172 -63 302 250 21 52 chr10 9081395 9081491 -136507797 - MIR3 SINE MIR -35 173 81 437 311 87 78 chr10 9081778 9082356 -136506932 - L2 LINE L2 -546 2768 2186 540 272 29 4 chr10 9083024 9083206 -136506082 + MIR SINE MIR 30 213 -49 230 56 28 0 chr10 9085822 9085858 -136503430 + (TTTTC)n Simple_repeat Simple_repeat 3 39 0 1103 116 12 0 chr10 9085863 9086027 -136503261 - AluSg/x SINE Alu -2 308 143 228 188 0 62 chr10 9086584 9086648 -136502640 + T-rich Low_complexity Low_complexity 1 60 0 180 200 0 0 chr10 9087571 9087611 -136501677 + CT-rich Low_complexity Low_complexity 1 40 0 206 362 32 0 chr10 9087842 9087936 -136501352 + MIR SINE MIR 43 139 -69 7553 23 1 3 chr10 9088476 9089885 -136499403 - L1PA4 LINE L1 -3 6152 4744 533 238 73 6 chr10 9090283 9090447 -136498841 + L1M4 LINE L1 4804 4978 -1168 23 33 0 0 chr10 9090815 9090845 -136498443 + AT_rich Low_complexity Low_complexity 1 30 0 33 25 0 0 chr10 9090926 9090966 -136498322 + AT_rich Low_complexity Low_complexity 1 40 0 40 21 0 0 chr10 9091179 9091226 -136498062 + AT_rich Low_complexity Low_complexity 1 47 0 220 205 0 0 chr10 9092461 9092500 -136496788 + CT-rich Low_complexity Low_complexity 3 41 0 320 229 83 28 chr10 9093286 9093395 -136495893 + MIR SINE MIR 30 144 -118 9358 34 16 138 chr10 9093507 9094966 -136494322 + SVA Other Other 15 1296 -90 2565 195 16 56 chr10 9095114 9095975 -136493313 + L1 LINE L1 4416 5242 -904 1588 147 4 0 chr10 9096298 9096536 -136492752 + AluSg/x SINE Alu 74 312 0 854 177 40 17 chr10 9096578 9096753 -136492535 + MER1B DNA MER1_type 107 285 -54 434 33 16 0 chr10 9096738 9096799 -136492489 + MER41B LTR ERV1 484 545 -90 * 430 16 0 0 chr10 9097623 9097685 -136491603 + AluY SINE Alu 249 310 0 437 237 108 21 chr10 9099543 9099737 -136489551 - L1MC4 LINE L1 -2 8040 7830 1001 161 28 0 chr10 9101031 9101211 -136488077 + MER5A DNA MER1_type 5 189 0 439 290 167 5 chr10 9105006 9105192 -136484096 - MIR SINE MIR 0 262 47 683 259 52 4 chr10 9106146 9106378 -136482910 + L1MEc LINE L1 36 278 -6118 1214 190 51 63 chr10 9107529 9107924 -136481364 + MLT1B LTR MaLR 1 390 0 250 188 12 35 chr10 9108764 9108888 -136480400 + (TTTA)n Simple_repeat Simple_repeat 1 121 0 26 50 0 0 chr10 9108969 9109009 -136480279 + AT_rich Low_complexity Low_complexity 1 40 0 975 94 22 22 chr10 9109254 9109435 -136479853 + SVA Other Other 687 867 -519 6282 59 30 56 chr10 9109447 9110429 -136478859 + SVA Other Other 430 1386 0 236 304 43 0 chr10 9111007 9111076 -136478212 + MIR SINE MIR 31 102 -106 2203 55 0 0 chr10 9111365 9111636 -136477652 - L1PA5 LINE L1 -17 6137 5867 23 0 0 0 chr10 9111654 9111677 -136477611 + AT_rich Low_complexity Low_complexity 1 23 0 2389 102 6 0 chr10 9112538 9112880 -136476408 - L1PA13 LINE L1 -2 6161 5818 210 145 0 48 chr10 9112999 9113061 -136476227 + (TAAAAA)n Simple_repeat Simple_repeat 1 59 0 344 0 71 0 chr10 9115496 9115552 -136473736 + (TG)n Simple_repeat Simple_repeat 2 61 0 285 75 0 0 chr10 9117383 9117423 -136471865 + (CA)n Simple_repeat Simple_repeat 1 40 0 973 268 32 52 chr10 9118612 9119015 -136470273 - MLT2C1 LTR ERVL -2 395 1 932 154 0 30 chr10 9119363 9119532 -136469756 + FRAM SINE Alu 1 164 -2 227 234 182 0 chr10 9119684 9119761 -136469527 - L1MA10 LINE L1 -8 6326 6236 2497 237 56 34 chr10 9119774 9121418 -136467870 - L1ME1 LINE L1 -117 6118 4443 1113 265 42 35 chr10 9121461 9121895 -136467393 + L1MCb LINE L1 8 444 -5601 792 267 49 4 chr10 9121894 9122141 -136467147 - L1ME1 LINE L1 -6103 293 36 * 21 57 0 0 chr10 9122504 9122539 -136466749 + AT_rich Low_complexity Low_complexity 1 35 0 205 407 47 0 chr10 9122561 9122647 -136466641 + L2 LINE L2 3140 3229 -43 2044 133 0 3 chr10 9122674 9122967 -136466321 - AluSx SINE Alu -7 305 14 23 33 0 0 chr10 9124467 9124497 -136464791 + AT_rich Low_complexity Low_complexity 1 30 0 334 268 114 24 chr10 9124599 9124722 -136464566 - L2 LINE L2 -4 3309 3176 205 208 47 104 chr10 9124782 9124888 -136464400 - L2 LINE L2 0 3313 3214 770 234 38 28 chr10 9125100 9125317 -136463971 - MLT2B2 LTR ERVL 0 515 250 676 190 69 66 chr10 9125317 9125579 -136463709 + L1MC3 LINE L1 2335 2600 -3826 2066 122 3 7 chr10 9125579 9125875 -136463413 + AluSc SINE Alu 1 295 -14 676 190 69 66 chr10 9125875 9125970 -136463318 + L1MC3 LINE L1 2600 2693 -3733 186 118 0 0 chr10 9125978 9126012 -136463276 + (TAAAAA)n Simple_repeat Simple_repeat 2 35 0 1318 221 18 49 chr10 9126012 9126500 -136462788 + L1MC3 LINE L1 3074 3546 -2880 * 9966 211 41 37 chr10 9126489 9130565 -136458723 + L1MC3 LINE L1 3969 8057 -8 1702 124 4 4 chr10 9130957 9131199 -136458089 + AluSc SINE Alu 1 242 -67 2226 216 17 4 chr10 9131439 9131911 -136457377 - MER66A LTR ERV1 0 478 1 1831 139 33 0 chr10 9132982 9133255 -136456033 - AluSx SINE Alu -28 284 3 381 262 122 67 chr10 9134070 9134234 -136455054 - MLT1J2 LTR MaLR -240 210 38 359 403 35 30 chr10 9134611 9134842 -136454446 - MIR SINE MIR -21 241 10 280 243 14 29 chr10 9135173 9135243 -136454045 - L2 LINE L2 -1 3312 3244 1603 110 27 11 chr10 9135438 9135701 -136453587 - L1PA13 LINE L1 -4 6159 5893 283 243 57 0 chr10 9136040 9136110 -136453178 + MIR SINE MIR 56 129 -79 1405 111 9 18 chr10 9136564 9136789 -136452499 + L1PA10 LINE L1 5942 6164 -4 5084 135 11 7 chr10 9137281 9138109 -136451179 - L1PA16 LINE L1 -10 6156 5326 212 0 36 0 chr10 9138237 9138265 -136451023 + (TATAA)n Simple_repeat Simple_repeat 4 32 0 2188 87 0 17 chr10 9140129 9140416 -136448872 - AluSg SINE Alu -28 282 1 484 246 41 25 chr10 9140417 9140539 -136448749 + MIR SINE MIR 63 186 -76 231 339 101 9 chr10 9140638 9140747 -136448541 + L2 LINE L2 3148 3266 -6 22 0 0 0 chr10 9141248 9141270 -136448018 + AT_rich Low_complexity Low_complexity 1 22 0 256 313 81 0 chr10 9141698 9141797 -136447491 + L2 LINE L2 3200 3306 -7 1772 222 76 40 chr10 9141945 9142110 -136447178 - L1MC4 LINE L1 -178 7864 7706 1718 170 0 42 chr10 9142110 9142416 -136446872 - AluJo SINE Alu -17 295 3 1772 222 76 40 chr10 9142416 9142827 -136446461 - L1MC4 LINE L1 -336 7706 7267 393 225 0 22 chr10 9142853 9142942 -136446346 - L1MC4 LINE L1 -749 7293 7207 45 62 0 0 chr10 9143259 9143339 -136445949 + AT_rich Low_complexity Low_complexity 1 80 0 22 35 0 0 chr10 9145385 9145414 -136443874 + AT_rich Low_complexity Low_complexity 1 29 0 3173 52 7 7 chr10 9146279 9146686 -136442602 + L1PA7 LINE L1 5737 6143 -11 22 56 0 0 chr10 9146686 9146722 -136442566 + AT_rich Low_complexity Low_complexity 1 36 0 251 326 56 11 chr10 9147280 9147369 -136441919 - L2 LINE L2 0 3272 3180 223 326 81 0 chr10 9147492 9147578 -136441710 + L2 LINE L2 3220 3312 -1 1909 95 56 0 chr10 9148589 9148874 -136440414 + L1PA10 LINE L1 5863 6163 -5 277 324 0 0 chr10 9149518 9149586 -136439702 - L2 LINE L2 0 3313 3246 21 57 0 0 chr10 9150421 9150456 -136438832 + AT_rich Low_complexity Low_complexity 1 35 0 207 0 0 0 chr10 9152384 9152407 -136436881 + (CA)n Simple_repeat Simple_repeat 2 24 0 26 64 0 0 chr10 9153404 9153451 -136435837 + AT_rich Low_complexity Low_complexity 1 47 0 1627 166 0 11 chr10 9153473 9153787 -136435501 - AluJb SINE Alu 0 327 17 1005 164 36 41 chr10 9154453 9154672 -136434616 - AluJo SINE Alu -9 303 86 2243 233 34 12 chr10 9154831 9155427 -136433861 - L1MC4a LINE L1 -155 7653 7045 231 36 0 0 chr10 9155441 9155469 -136433819 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 2259 26 7 0 chr10 9155529 9155799 -136433489 - L1PA4 LINE L1 -3 6152 5881 824 236 107 23 chr10 9156430 9156978 -136432310 + L1MD2 LINE L1 5528 6161 -5 2909 156 20 0 chr10 9157000 9157501 -136431787 + L1PB4 LINE L1 5639 6149 -7 348 261 72 52 chr10 9157795 9157948 -136431340 - L2 LINE L2 0 3313 3158 2010 122 95 12 chr10 9158229 9158565 -136430723 + THE1B LTR MaLR 1 364 0 1443 186 80 0 chr10 9158617 9158905 -136430383 - AluJb SINE Alu 0 309 1 327 298 108 25 chr10 9158905 9159063 -136430225 + MIR SINE MIR 35 205 -57 313 222 32 0 chr10 9159630 9159693 -136429595 - L2 LINE L2 0 3313 3249 285 310 85 101 chr10 9159799 9160057 -136429231 - L2 LINE L2 -5 3267 3014 1076 151 0 0 chr10 9160523 9160689 -136428599 - AluSg/x SINE Alu -2 310 145 2369 73 0 3 chr10 9160898 9161198 -136428090 - AluSc SINE Alu -9 300 2 488 237 21 156 chr10 9161433 9161716 -136427572 - MIR SINE MIR -2 260 16 193 269 118 32 chr10 9162923 9163016 -136426272 - MIR SINE MIR 0 262 162 239 318 15 0 chr10 9164178 9164244 -136425044 - L2 LINE L2 -1 3271 3205 2140 125 42 28 chr10 9164269 9164628 -136424660 - THE1B LTR MaLR 0 364 1 382 233 41 34 chr10 9164840 9165090 -136424198 + MLT1H1 LTR MaLR 120 376 -214 182 337 105 0 chr10 9165279 9165374 -136423914 + MIR SINE MIR 71 175 -87 849 184 38 160 chr10 9165420 9165520 -136423768 + MER33 DNA MER1_type 1 112 -2473 1935 144 9 3 chr10 9165520 9165860 -136423428 + L1MA2 LINE L1 5963 6304 0 849 184 38 160 chr10 9165860 9166128 -136423160 + MER33 DNA MER1_type 112 324 0 4105 132 9 0 chr10 9166234 9166886 -136422402 - L1MA2 LINE L1 -15 6289 5632 1675 97 132 8 chr10 9167086 9167344 -136421944 - AluSx SINE Alu -22 290 1 22 99 0 0 chr10 9167983 9168054 -136421234 + AT_rich Low_complexity Low_complexity 1 71 0 225 159 0 0 chr10 9169678 9169722 -136419566 + (TG)n Simple_repeat Simple_repeat 2 45 0 293 186 29 43 chr10 9169914 9169984 -136419304 - L1ME4a LINE L1 -69 6052 5984 746 334 97 45 chr10 9170213 9170719 -136418569 - L2 LINE L2 -31 3282 2804 1647 167 7 33 chr10 9170719 9171025 -136418263 - AluJo SINE Alu -13 299 2 746 334 97 45 chr10 9171025 9171300 -136417988 - L2 LINE L2 -509 2804 2451 1255 175 54 35 chr10 9171300 9171614 -136417674 - MER33 DNA MER1_type 0 324 5 746 334 97 45 chr10 9171614 9171790 -136417498 - L2 LINE L2 -862 2451 2286 328 315 68 25 chr10 9171794 9172115 -136417173 - L1ME4a LINE L1 -304 5817 5483 269 377 51 55 chr10 9172957 9173448 -136415840 - L2 LINE L2 -340 2974 2486 389 161 11 0 chr10 9173809 9173896 -136415392 + (TAGA)n Simple_repeat Simple_repeat 3 90 0 1301 197 38 112 chr10 9174163 9174584 -136414704 - MLT1B LTR MaLR 0 390 1 2075 109 0 3 chr10 9174590 9174893 -136414395 + AluSq SINE Alu 1 302 0 314 274 9 19 chr10 9174910 9175016 -136414272 + (TATATG)n Simple_repeat Simple_repeat 2 106 0 780 103 46 17 chr10 9175577 9175752 -136413536 + CT-rich Low_complexity Low_complexity 1 180 0 2055 108 16 10 chr10 9175765 9176071 -136413217 - AluSg SINE Alu -1 309 2 2865 240 68 48 chr10 9176117 9176168 -136413120 - L1ME1 LINE L1 -5 6161 6113 1176 183 99 56 chr10 9176168 9176490 -136412798 - MER44D DNA MER2_type -2 607 2 2865 240 68 48 chr10 9176490 9177879 -136411409 - L1ME1 LINE L1 -53 6113 4687 195 360 114 0 chr10 9177896 9178010 -136411278 - MIR SINE MIR -26 236 110 4914 236 50 50 chr10 9178043 9180223 -136409065 + L1MDa LINE L1 889 3158 -3382 4045 167 6 4 chr10 9180223 9180925 -136408363 - L1PA16 LINE L1 -1 6165 5463 4914 236 50 50 chr10 9180925 9182066 -136407222 + L1MDa LINE L1 3158 4297 -2243 1385 148 4 18 chr10 9182066 9182295 -136406993 - AluJb SINE Alu -86 226 1 1016 246 54 22 chr10 9182322 9182599 -136406689 + L1MDa LINE L1 4346 4631 -1909 498 146 64 27 chr10 9182608 9182718 -136406570 + L1MD2 LINE L1 6246 6359 0 496 44 0 0 chr10 9182736 9182825 -136406463 + L1PA3 LINE L1 6087 6175 0 25 83 0 0 chr10 9183291 9183351 -136405937 + AT_rich Low_complexity Low_complexity 1 60 0 263 323 31 8 chr10 9183387 9183517 -136405771 + L1MEc LINE L1 70 202 -6194 349 329 40 22 chr10 9183855 9184083 -136405205 + L1MEc LINE L1 638 869 -5527 210 71 0 0 chr10 9184249 9184277 -136405011 + (TTTTA)n Simple_repeat Simple_repeat 1 28 0 883 318 112 33 chr10 9184676 9185248 -136404040 - L2 LINE L2 -577 2737 2121 2680 186 40 20 chr10 9185702 9186309 -136402979 - L1 LINE L1 -1902 4244 3626 438 250 35 0 chr10 9187815 9187931 -136401357 - MER94 DNA DNA -12 122 3 2866 130 77 83 chr10 9187990 9188629 -136400659 + MER41B LTR ERV1 1 635 0 23 0 0 0 chr10 9189865 9189888 -136399400 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr10 9191009 9191034 -136398254 + AT_rich Low_complexity Low_complexity 1 25 0 951 88 15 0 chr10 9191063 9191200 -136398088 - L1PB2 LINE L1 -7 6144 6006 1511 182 19 4 chr10 9191200 9191464 -136397824 - AluJb SINE Alu -44 268 1 403 348 82 16 chr10 9192255 9192499 -136396789 - MIR SINE MIR 0 262 3 303 28 0 0 chr10 9193900 9193936 -136395352 + (TCTA)n Simple_repeat Simple_repeat 3 38 0 22 35 0 0 chr10 9194737 9194766 -136394522 + AT_rich Low_complexity Low_complexity 1 29 0 4960 79 138 18 chr10 9195065 9195260 -136394028 + L1PA10 LINE L1 5298 5468 -700 2112 128 3 0 chr10 9195260 9195556 -136393732 + AluSq SINE Alu 1 297 -16 4960 79 138 18 chr10 9195556 9196136 -136393152 + L1PA10 LINE L1 5468 6166 -2 212 200 22 0 chr10 9196354 9196399 -136392889 + A-rich Low_complexity Low_complexity 5 50 0 207 213 21 21 chr10 9196613 9196660 -136392628 - L2 LINE L2 -2 3311 3265 423 202 0 0 chr10 9197035 9197144 -136392144 + (CA)n Simple_repeat Simple_repeat 2 110 0 1239 241 116 7 chr10 9197596 9198010 -136391278 - MLT1C LTR MaLR -8 459 1 858 88 0 0 chr10 9198585 9198744 -136390544 - L1PA8 LINE L1 -11 6161 6027 1750 131 53 3 chr10 9198847 9198972 -136390316 + AluSx SINE Alu 1 118 -194 459 0 0 0 chr10 9198972 9199023 -136390265 + (CA)n Simple_repeat Simple_repeat 2 52 0 1750 131 53 3 chr10 9199023 9199179 -136390109 + AluSx SINE Alu 118 296 -16 396 286 127 45 chr10 9199238 9199483 -136389805 + L1ME LINE L1 5408 5672 -449 247 211 0 0 chr10 9199547 9199599 -136389689 + L1ME LINE L1 5757 5808 -356 468 197 0 63 chr10 9199760 9199887 -136389401 + L1ME1 LINE L1 4562 4680 -1466 2010 135 0 3 chr10 9199970 9200307 -136388981 + AluSq SINE Alu 1 313 0 242 240 80 0 chr10 9200553 9200653 -136388635 + L1ME1 LINE L1 5122 5229 -917 391 317 88 4 chr10 9200672 9200934 -136388354 + L1M2 LINE L1 5256 5539 -761 383 256 74 17 chr10 9200930 9201106 -136388182 + L1ME1 LINE L1 5711 5896 -274 * 1061 228 26 98 chr10 9201140 9201526 -136387762 - MLT1A2 LTR MaLR -16 358 1 6394 89 4 2 chr10 9203251 9204276 -136385012 + L1PA14 LINE L1 5121 6156 -5 22 0 0 0 chr10 9204282 9204304 -136384984 + AT_rich Low_complexity Low_complexity 1 22 0 324 269 53 58 chr10 9204522 9204693 -136384595 + MLT1J2 LTR MaLR 280 449 -1 286 369 114 23 chr10 9204740 9205003 -136384285 + L3 LINE CR1 68 354 -1223 233 325 117 8 chr10 9205311 9205431 -136383857 - MIR SINE MIR -129 133 1 1786 296 143 11 chr10 9206028 9206744 -136382544 - L2 LINE L2 -446 2868 2059 21 0 0 0 chr10 9207108 9207129 -136382159 + AT_rich Low_complexity Low_complexity 1 21 0 1497 122 0 14 chr10 9208828 9209042 -136380246 - AluSg SINE Alu -99 211 1 24 53 0 0 chr10 9209049 9209087 -136380201 + AT_rich Low_complexity Low_complexity 1 38 0 180 313 91 40 chr10 9209098 9209197 -136380091 - L3b LINE CR1 -189 1394 1291 545 288 9 39 chr10 9209278 9209342 -136379946 + L1ME1 LINE L1 5919 5983 -183 2249 146 5 19 chr10 9209342 9209711 -136379577 - THE1B LTR MaLR 0 364 1 545 288 9 39 chr10 9209711 9209879 -136379409 + L1ME1 LINE L1 5983 6144 -22 247 215 9 28 chr10 9209895 9210002 -136379286 + (TA)n Simple_repeat Simple_repeat 2 106 0 384 302 145 35 chr10 9210462 9210717 -136378571 + MLT1I LTR MaLR 21 303 -106 1346 278 16 5 chr10 9210726 9211108 -136378180 - L2 LINE L2 -693 2621 2236 637 325 43 9 chr10 9214085 9214316 -136374972 + MIR SINE MIR 24 262 0 2051 143 0 6 chr10 9214440 9214754 -136374534 - AluSx SINE Alu 0 312 1 186 71 0 0 chr10 9214881 9214909 -136374379 + (TA)n Simple_repeat Simple_repeat 1 28 0 180 0 0 0 chr10 9215054 9215074 -136374214 + (TG)n Simple_repeat Simple_repeat 2 21 0 2064 138 0 0 chr10 9215421 9215712 -136373576 - AluSx SINE Alu -20 292 2 520 154 24 49 chr10 9215993 9216116 -136373172 - L1MC2 LINE L1 0 6344 6225 466 284 100 15 chr10 9216447 9216718 -136372570 + LTR33A LTR ERVL 230 523 0 261 0 0 0 chr10 9216767 9216796 -136372492 + (A)n Simple_repeat Simple_repeat 1 29 0 306 254 56 63 chr10 9217325 9217451 -136371837 + L2 LINE L2 3189 3313 0 789 205 0 26 chr10 9217595 9217751 -136371537 + FRAM SINE Alu 1 152 -24 22 0 0 0 chr10 9218707 9218729 -136370559 + AT_rich Low_complexity Low_complexity 1 22 0 308 240 124 41 chr10 9220209 9220330 -136368958 - MIR SINE MIR -62 200 70 216 354 0 76 chr10 9220375 9220519 -136368769 + L2 LINE L2 3139 3271 -1 734 172 0 51 chr10 9221646 9221803 -136367485 + AluJo SINE Alu 39 187 -125 194 105 26 0 chr10 9222797 9222835 -136366453 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 2089 124 0 3 chr10 9223056 9223346 -136365942 - AluSg SINE Alu -21 289 1 5009 32 0 0 chr10 9224115 9224713 -136364575 - L1PA3 LINE L1 -1046 5100 4503 7835 14 0 0 chr10 9224713 9225737 -136363551 + L1PA3 LINE L1 5132 6155 0 626 37 86 12 chr10 9225922 9226077 -136363211 + (TA)n Simple_repeat Simple_repeat 1 170 -4 1712 161 4 18 chr10 9226077 9226356 -136362932 - AluJb SINE Alu -37 275 1 626 37 86 12 chr10 9226356 9226362 -136362926 + (TA)n Simple_repeat Simple_repeat 170 174 0 25 51 0 0 chr10 9228954 9228993 -136360295 + AT_rich Low_complexity Low_complexity 1 39 0 201 211 0 0 chr10 9229356 9229408 -136359880 + GA-rich Low_complexity Low_complexity 2 53 0 380 111 44 0 chr10 9230042 9230132 -136359156 + (TA)n Simple_repeat Simple_repeat 1 94 0 241 295 62 36 chr10 9230255 9230367 -136358921 - MIR SINE MIR -48 214 100 29 0 0 0 chr10 9231665 9231694 -136357594 + AT_rich Low_complexity Low_complexity 1 29 0 2601 161 9 17 chr10 9232153 9232619 -136356669 + MLT1C LTR MaLR 1 462 -5 181 296 0 0 chr10 9232962 9233006 -136356282 + MIR3 SINE MIR 116 159 -49 392 0 21 0 chr10 9233298 9233346 -136355942 + (TG)n Simple_repeat Simple_repeat 2 50 0 3001 196 41 17 chr10 9233388 9234040 -136355248 - L1MD1 LINE L1 0 6242 5575 442 266 62 0 chr10 9234041 9234169 -136355119 + L1MD1 LINE L1 5408 5543 -699 2633 226 41 22 chr10 9234318 9234959 -136354329 - MER82 DNA MER2_type 0 653 1 245 218 18 0 chr10 9235128 9235183 -136354105 - L1MC/D LINE L1 -397 5845 5790 2331 83 0 10 chr10 9235232 9235534 -136353754 + AluY SINE Alu 1 299 -12 256 284 12 0 chr10 9237914 9237995 -136351293 + MIR3 SINE MIR 125 206 -2 234 233 0 0 chr10 9238203 9238263 -136351025 + CT-rich Low_complexity Low_complexity 2 61 0 270 294 29 0 chr10 9238270 9238338 -136350950 - L2 LINE L2 -17 3255 3186 2120 122 0 0 chr10 9238362 9238650 -136350638 - AluSx SINE Alu -24 288 1 475 355 59 16 chr10 9238792 9239164 -136350124 - L2 LINE L2 -455 2859 2472 355 312 18 59 chr10 9240300 9240470 -136348818 + L3 LINE CR1 854 1016 -561 1900 139 20 0 chr10 9240720 9241021 -136348267 + AluSx SINE Alu 1 307 -5 21 0 0 0 chr10 9241395 9241416 -136347872 + AT_rich Low_complexity Low_complexity 1 21 0 2300 50 4 4 chr10 9241848 9242127 -136347161 + AluY SINE Alu 1 279 -32 308 24 0 24 chr10 9242128 9242170 -136347118 + (GAAAA)n Simple_repeat Simple_repeat 2 42 0 240 183 73 73 chr10 9242174 9242256 -136347032 - L2 LINE L2 -12 3260 3179 229 70 23 0 chr10 9242274 9242317 -136346971 - Alu SINE Alu 0 300 257 1180 256 61 28 chr10 9242744 9243205 -136346083 + L1M4 LINE L1 2281 2756 -3390 3961 176 6 6 chr10 9243237 9243934 -136345354 - L1PA16 LINE L1 -7 6159 5463 2523 245 52 50 chr10 9243932 9245074 -136344214 + L1M4 LINE L1 2759 3903 -2243 * 1408 148 4 18 chr10 9245074 9245303 -136343985 - AluJb SINE Alu -86 226 1 697 233 24 38 chr10 9245329 9245539 -136343749 + L1M4 LINE L1 3950 4156 -1990 306 185 25 37 chr10 9245616 9245697 -136343591 + L1MD1 LINE L1 6131 6210 -32 405 0 0 0 chr10 9246051 9246096 -136343192 + (TG)n Simple_repeat Simple_repeat 1 45 0 2296 69 10 0 chr10 9246192 9246481 -136342807 - AluY SINE Alu -15 296 5 26 50 0 0 chr10 9246495 9246535 -136342753 + AT_rich Low_complexity Low_complexity 1 40 0 201 288 0 17 chr10 9246683 9246742 -136342546 + CT-rich Low_complexity Low_complexity 4 61 0 34 24 0 0 chr10 9246755 9246796 -136342492 + AT_rich Low_complexity Low_complexity 1 41 0 23 0 0 0 chr10 9249974 9249997 -136339291 + AT_rich Low_complexity Low_complexity 1 23 0 306 290 113 8 chr10 9250515 9250639 -136338649 + L2 LINE L2 3173 3309 -4 28 29 0 0 chr10 9251059 9251094 -136338194 + AT_rich Low_complexity Low_complexity 1 35 0 407 259 69 8 chr10 9251284 9251415 -136337873 + MIR SINE MIR 124 262 0 297 0 0 0 chr10 9251619 9251652 -136337636 + (TA)n Simple_repeat Simple_repeat 2 34 0 * 336 24 0 0 chr10 9251651 9251692 -136337596 + (GA)n Simple_repeat Simple_repeat 2 42 0 2207 116 3 3 chr10 9252900 9253210 -136336078 - AluSx SINE Alu 0 312 3 297 0 0 0 chr10 9253891 9253924 -136335364 + (CA)n Simple_repeat Simple_repeat 2 34 0 23 33 0 0 chr10 9254538 9254568 -136334720 + AT_rich Low_complexity Low_complexity 1 30 0 1017 185 0 0 chr10 9254951 9255129 -136334159 - AluJb SINE Alu -5 307 130 239 164 36 0 chr10 9255827 9255882 -136333406 + GA-rich Low_complexity Low_complexity 2 58 0 182 356 58 0 chr10 9255974 9256061 -136333227 + MIR3 SINE MIR 87 178 -30 21 0 0 0 chr10 9257321 9257342 -136331946 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 9259068 9259096 -136330192 + AT_rich Low_complexity Low_complexity 1 28 0 216 319 124 0 chr10 9260655 9260768 -136328520 + MIR SINE MIR 20 146 -62 21 57 0 0 chr10 9263329 9263364 -136325924 + AT_rich Low_complexity Low_complexity 1 35 0 243 0 0 0 chr10 9264321 9264348 -136324940 + (A)n Simple_repeat Simple_repeat 1 27 0 273 57 0 0 chr10 9264589 9264624 -136324664 + (TC)n Simple_repeat Simple_repeat 2 36 0 321 26 0 0 chr10 9264624 9264662 -136324626 + (CA)n Simple_repeat Simple_repeat 1 38 0 27 0 0 0 chr10 9264662 9264689 -136324599 + AT_rich Low_complexity Low_complexity 1 27 0 453 311 52 52 chr10 9265456 9265668 -136323620 + MIR SINE MIR 15 226 -36 21 36 0 0 chr10 9265988 9266016 -136323272 + AT_rich Low_complexity Low_complexity 1 28 0 642 299 49 47 chr10 9268559 9268924 -136320364 - L1MC/D LINE L1 -2099 5709 5344 336 306 47 57 chr10 9268956 9269149 -136320139 - MIR SINE MIR -70 192 2 22 0 0 0 chr10 9269184 9269206 -136320082 + AT_rich Low_complexity Low_complexity 1 22 0 237 325 65 0 chr10 9269230 9269307 -136319981 - L2 LINE L2 -3 3310 3229 241 194 30 30 chr10 9270098 9270165 -136319123 + MER116 DNA Mariner 1 67 -13 1768 100 0 0 chr10 9270372 9270603 -136318685 + AluSx SINE Alu 1 231 -81 590 99 41 8 chr10 9270631 9270752 -136318536 + GA-rich Low_complexity Low_complexity 4 128 0 31 44 0 0 chr10 9270898 9270943 -136318345 + AT_rich Low_complexity Low_complexity 1 45 0 305 340 77 19 chr10 9271412 9271568 -136317720 + MIR SINE MIR 57 221 -41 27 49 0 0 chr10 9272909 9272950 -136316338 + AT_rich Low_complexity Low_complexity 1 41 0 180 0 0 0 chr10 9273026 9273046 -136316242 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 960 43 0 0 chr10 9273048 9273164 -136316124 - AluY SINE Alu -31 280 165 204 234 0 43 chr10 9273814 9273861 -136315427 + polypyrimidine Low_complexity Low_complexity 4 48 0 1134 261 23 3 chr10 9273938 9274237 -136315051 - L1MC/D LINE L1 -986 5160 4856 2073 192 34 9 chr10 9274249 9274791 -136314497 + L1MA9 LINE L1 4886 5436 -743 1069 148 99 0 chr10 9274794 9274996 -136314292 + L1MA6 LINE L1 6073 6294 -6 3776 145 72 65 chr10 9275086 9275830 -136313458 + L1MA9 LINE L1 5417 6169 -143 360 0 0 0 chr10 9275830 9275870 -136313418 + (CA)n Simple_repeat Simple_repeat 1 40 0 3776 145 72 65 chr10 9275870 9275995 -136313293 + L1MA9 LINE L1 6169 6292 -20 25 31 0 0 chr10 9276011 9276043 -136313245 + AT_rich Low_complexity Low_complexity 1 32 0 518 281 63 53 chr10 9276081 9276397 -136312891 + MER34 LTR ERV1 9 530 -177 5056 178 73 57 chr10 9276397 9276926 -136312362 + L1MCa LINE L1 281 800 -5626 270 0 0 0 chr10 9276926 9276956 -136312332 + (CAA)n Simple_repeat Simple_repeat 1 30 0 5056 178 73 57 chr10 9276956 9276981 -136312307 + L1MCa LINE L1 800 823 -5603 303 28 0 0 chr10 9276981 9277017 -136312271 + (TAAAA)n Simple_repeat Simple_repeat 2 37 0 5056 178 73 57 chr10 9277017 9277714 -136311574 + L1MCa LINE L1 823 1553 -4873 887 241 4 9 chr10 9277706 9277934 -136311354 + L1M4 LINE L1 3909 4135 -2011 * 254 226 97 0 chr10 9279127 9279189 -136310099 - MER63 DNA MER1_type -16 1045 978 264 219 14 41 chr10 9279348 9279421 -136309867 - MER103 DNA DNA -79 87 17 671 296 43 17 chr10 9279464 9279697 -136309591 + MIR SINE MIR 11 249 -13 446 298 60 38 chr10 9280543 9280942 -136308346 + L1ME LINE L1 534 941 -5129 * 1121 241 46 20 chr10 9280940 9281396 -136307892 + L1ME LINE L1 2793 3260 -2820 847 265 58 0 chr10 9281449 9281706 -136307582 + L1ME LINE L1 3537 3808 -2272 1755 215 35 8 chr10 9283003 9283380 -136305908 - MLT1B LTR MaLR 0 390 4 370 264 0 0 chr10 9283910 9283997 -136305291 - L2 LINE L2 0 3272 3186 666 311 104 32 chr10 9284661 9285305 -136303983 + L2 LINE L2 2549 3206 -107 205 169 26 65 chr10 9288092 9288169 -136301119 + CT-rich Low_complexity Low_complexity 5 78 0 5370 172 29 18 chr10 9288408 9289754 -136299534 - L1PA16 LINE L1 -10 6156 4778 1463 209 14 3 chr10 9289754 9290050 -136299238 - AluJb SINE Alu -8 304 6 5370 172 29 18 chr10 9290050 9290548 -136298740 - L1PA16 LINE L1 -1388 4778 4287 21 0 0 0 chr10 9290674 9290695 -136298593 + AT_rich Low_complexity Low_complexity 1 21 0 440 326 73 22 chr10 9290725 9291038 -136298250 + L1MC4a LINE L1 5583 5911 -1897 329 302 135 75 chr10 9291226 9291298 -136297990 + HAL1 LINE L1 4 70 -2437 1652 241 39 22 chr10 9291298 9291792 -136297496 - MLT1D LTR MaLR 0 505 4 329 302 135 75 chr10 9291792 9292090 -136297198 + HAL1 LINE L1 70 396 -2111 999 192 35 13 chr10 9292114 9292343 -136296945 - L1 LINE L1 -1478 4668 4435 4689 183 32 34 chr10 9292910 9294784 -136294504 + L1MA9 LINE L1 4436 6310 -2 22 0 0 0 chr10 9294892 9294914 -136294374 + AT_rich Low_complexity Low_complexity 1 22 0 568 274 129 35 chr10 9295146 9295605 -136293683 + L2 LINE L2 2631 3133 -180 292 343 10 18 chr10 9295719 9295877 -136293411 - MIR SINE MIR -23 185 31 1886 253 92 29 chr10 9296003 9296302 -136292986 - L1ME1 LINE L1 -63 6172 5893 3153 136 10 0 chr10 9296302 9296794 -136292494 - LOR1a LTR ERV1 0 497 1 1886 253 92 29 chr10 9296794 9297264 -136292024 - L1ME1 LINE L1 -342 5893 5354 23 0 0 0 chr10 9297298 9297321 -136291967 + AT_rich Low_complexity Low_complexity 1 23 0 1344 243 147 16 chr10 9297337 9297982 -136291306 - L1ME1 LINE L1 -872 5343 4614 1264 266 55 9 chr10 9297983 9298441 -136290847 - L1ME1 LINE L1 -2120 4095 3617 237 171 86 14 chr10 9298440 9298510 -136290778 - L1M4 LINE L1 -355 5823 5749 * 347 176 83 46 chr10 9298619 9298727 -136290561 - L1ME1 LINE L1 -2904 3311 3200 21 57 0 0 chr10 9298813 9298848 -136290440 + AT_rich Low_complexity Low_complexity 1 35 0 640 230 15 31 chr10 9298860 9299056 -136290232 - L1ME1 LINE L1 -4628 1768 1576 244 180 0 33 chr10 9299053 9299114 -136290174 - L1MA10 LINE L1 -2 6332 6274 * 3671 181 53 16 chr10 9299110 9299401 -136289887 - L1MA9 LINE L1 -224 6088 5809 387 0 0 0 chr10 9299401 9299444 -136289844 + (TA)n Simple_repeat Simple_repeat 2 44 0 3671 181 53 16 chr10 9299444 9299740 -136289548 - L1MA9 LINE L1 -503 5809 5525 198 0 0 0 chr10 9299740 9299762 -136289526 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 3671 181 53 16 chr10 9299762 9300001 -136289287 - L1MA9 LINE L1 -787 5525 5231 674 171 6 57 chr10 9299999 9300174 -136289114 + L1 LINE L1 4553 4718 -1428 * 650 228 40 61 chr10 9300174 9300402 -136288886 + pTR5 LTR ERV1 743 965 -1473 4540 105 46 75 chr10 9300481 9301332 -136287956 + LTR12 LTR ERV1 1 826 0 1022 153 20 44 chr10 9301332 9301535 -136287753 + L1 LINE L1 4715 4912 -1234 2084 112 3 26 chr10 9301688 9302001 -136287287 - AluSx SINE Alu -6 306 1 334 294 176 78 chr10 9302131 9302145 -136287143 + L2 LINE L2 2306 2317 -997 1025 262 62 53 chr10 9302145 9302595 -136286693 + LTR16A1 LTR ERVL 1 454 -3 334 294 176 78 chr10 9302595 9302927 -136286361 + L2 LINE L2 2317 2686 -628 884 44 0 0 chr10 9303174 9303288 -136286000 + L1PA6 LINE L1 6041 6154 0 678 190 0 8 chr10 9303419 9303540 -136285748 - FLAM_C SINE Alu -17 126 7 21 57 0 0 chr10 9303632 9303667 -136285621 + AT_rich Low_complexity Low_complexity 1 35 0 220 269 0 0 chr10 9306229 9306281 -136283007 + (CA)n Simple_repeat Simple_repeat 2 53 0 2256 89 7 0 chr10 9306873 9307165 -136282123 + AluSc SINE Alu 1 294 -15 354 323 78 5 chr10 9307198 9307379 -136281909 + MIR SINE MIR 20 218 -44 725 164 0 0 chr10 9307564 9307680 -136281608 - AluJb SINE Alu -196 116 1 325 348 28 14 chr10 9309230 9309371 -136279917 + MIR3 SINE MIR 41 183 -25 247 268 141 56 chr10 9310139 9310281 -136279007 - MIR3 SINE MIR -1 207 54 611 331 50 4 chr10 9310393 9310653 -136278635 - L2 LINE L2 -341 2973 2702 976 235 15 0 chr10 9310673 9310877 -136278411 - MER58A DNA MER1_type -16 208 2 328 200 0 13 chr10 9310882 9310957 -136278331 - L2 LINE L2 -615 2699 2626 573 55 0 0 chr10 9311131 9311204 -136278084 + (TTCC)n Simple_repeat Simple_repeat 4 76 0 1993 112 7 0 chr10 9311225 9311521 -136277767 - AluSp SINE Alu -15 298 1 2112 107 7 3 chr10 9312504 9312804 -136276484 + AluSx SINE Alu 1 301 -11 26 30 0 0 chr10 9313378 9313411 -136275877 + AT_rich Low_complexity Low_complexity 1 33 0 252 77 0 0 chr10 9313684 9313723 -136275565 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 6537 76 12 5 chr10 9313724 9314687 -136274601 - L1PA8 LINE L1 -24 6148 5180 3358 127 45 7 chr10 9314663 9315213 -136274075 + L1P LINE L1 3780 4350 -1796 * 658 53 11 0 chr10 9315248 9315342 -136273946 - L1PA13 LINE L1 -3 6160 6066 270 0 0 0 chr10 9315599 9315629 -136273659 + (TG)n Simple_repeat Simple_repeat 2 31 0 530 55 44 0 chr10 9316094 9316185 -136273103 + (TCTA)n Simple_repeat Simple_repeat 4 98 0 204 200 0 0 chr10 9317421 9317461 -136271827 + GA-rich Low_complexity Low_complexity 2 41 0 249 108 0 0 chr10 9317865 9317902 -136271386 + (TG)n Simple_repeat Simple_repeat 1 37 0 25 51 0 0 chr10 9318152 9318191 -136271097 + AT_rich Low_complexity Low_complexity 1 39 0 196 168 53 18 chr10 9318318 9318431 -136270857 + (TA)n Simple_repeat Simple_repeat 2 118 0 237 192 24 48 chr10 9318442 9318567 -136270721 + (TA)n Simple_repeat Simple_repeat 1 122 0 23 33 0 0 chr10 9318808 9318838 -136270450 + AT_rich Low_complexity Low_complexity 1 30 0 276 258 116 111 chr10 9320392 9320617 -136268671 - L2 LINE L2 0 3313 3088 212 361 18 54 chr10 9320635 9320801 -136268487 - L2 LINE L2 -445 2869 2710 6249 78 29 3 chr10 9320801 9321712 -136267576 + L1PA7 LINE L1 5223 6155 0 263 325 24 29 chr10 9321712 9321918 -136267370 + HAL1b LINE L1 378 582 -766 276 271 44 92 chr10 9322070 9322321 -136266967 + L1MC5 LINE L1 7289 7527 -434 357 333 46 6 chr10 9322427 9322601 -136266687 + L1ME3A LINE L1 5990 6170 0 325 284 82 22 chr10 9323284 9323418 -136265870 + MIR SINE MIR 51 192 -70 305 339 92 30 chr10 9323577 9323872 -136265416 - L1ME4a LINE L1 -184 5937 5625 1608 201 7 3 chr10 9325020 9325329 -136263959 + AluJb SINE Alu 1 310 0 219 316 53 42 chr10 9326347 9326442 -136262846 - L2 LINE L2 -21 3292 3197 377 317 129 12 chr10 9326583 9326970 -136262318 - L2 LINE L2 -407 2907 2413 1226 301 22 26 chr10 9326980 9327354 -136261934 + L2 LINE L2 2347 2720 -594 2214 117 0 0 chr10 9327354 9327653 -136261635 + AluSg SINE Alu 1 299 -11 1226 301 22 26 chr10 9327653 9327740 -136261548 + L2 LINE L2 2720 2806 -508 287 296 136 30 chr10 9327772 9327971 -136261317 - L2 LINE L2 -961 2353 2134 574 288 127 76 chr10 9327971 9328459 -136260829 + MLT1E LTR MaLR 1 558 -9 352 262 23 113 chr10 9328610 9328866 -136260422 - L2 LINE L2 -1819 1495 1263 2043 118 14 0 chr10 9329472 9329772 -136259516 + AluSx SINE Alu 1 304 0 218 385 10 26 chr10 9329775 9329967 -136259321 + L2 LINE L2 1767 1955 -1359 184 235 118 24 chr10 9330359 9330444 -136258844 + L2 LINE L2 1991 2083 -1231 2841 303 54 42 chr10 9330852 9332274 -136257014 + L2 LINE L2 1797 3235 -78 396 319 129 12 chr10 9332837 9333000 -136256288 + MIR3 SINE MIR 16 197 -11 2231 108 3 6 chr10 9333490 9333841 -136255447 - L1P LINE L1 -794 5352 5003 1217 47 0 0 chr10 9333856 9334039 -136255249 + L1PA4 LINE L1 5996 6178 0 362 346 55 11 chr10 9334267 9334449 -136254839 + MIR3 SINE MIR 10 199 -9 459 278 8 32 chr10 9335853 9335979 -136253309 - MIR SINE MIR 0 262 140 1029 201 65 76 chr10 9336525 9336894 -136252394 + MLT1A1 LTR MaLR 1 365 0 266 310 26 26 chr10 9337023 9337139 -136252149 - MIR SINE MIR -116 146 31 3318 111 16 2 chr10 9337361 9337858 -136251430 + L1PA15 LINE L1 5662 6165 0 2431 86 0 0 chr10 9338551 9338854 -136250434 - AluSg SINE Alu -7 303 1 603 296 49 16 chr10 9338963 9339270 -136250018 - L1ME4a LINE L1 -207 5914 5598 809 285 139 30 chr10 9339969 9340442 -136248846 - MLT1L LTR MaLR -1 614 90 1721 96 4 0 chr10 9340466 9340696 -136248592 + AluSg/x SINE Alu 74 304 -6 243 0 0 0 chr10 9341163 9341190 -136248098 + (A)n Simple_repeat Simple_repeat 1 27 0 455 313 98 27 chr10 9342077 9342301 -136246987 + MIR SINE MIR 2 241 -21 1936 135 0 0 chr10 9342740 9343044 -136246244 - AluSx SINE Alu 0 304 1 703 140 29 0 chr10 9343123 9343259 -136246029 + (CTTTA)n Simple_repeat Simple_repeat 2 141 0 2207 90 3 3 chr10 9343259 9343559 -136245729 - AluSg SINE Alu -10 300 1 537 282 153 5 chr10 9343647 9343863 -136245425 + MIR SINE MIR 14 261 -1 1809 117 48 31 chr10 9344428 9344549 -136244739 + AluSx SINE Alu 1 118 -194 198 0 0 0 chr10 9344549 9344571 -136244717 + (TAA)n Simple_repeat Simple_repeat 2 23 0 1809 117 48 31 chr10 9344571 9344739 -136244549 + AluSx SINE Alu 118 295 -17 232 182 0 0 chr10 9345680 9345724 -136243564 - MIR SINE MIR -109 153 110 27 62 0 0 chr10 9348749 9348797 -136240491 + AT_rich Low_complexity Low_complexity 1 48 0 25 31 0 0 chr10 9349174 9349206 -136240082 + AT_rich Low_complexity Low_complexity 1 32 0 25 90 0 0 chr10 9349483 9349550 -136239738 + AT_rich Low_complexity Low_complexity 1 67 0 357 24 0 0 chr10 9349767 9349809 -136239479 + (TG)n Simple_repeat Simple_repeat 2 43 0 414 0 0 0 chr10 9350714 9350760 -136238528 + (CA)n Simple_repeat Simple_repeat 1 46 0 1256 187 103 54 chr10 9352162 9352272 -136237016 - MER7A DNA MER2_type -2693 345 242 2268 62 0 0 chr10 9352272 9352548 -136236740 + AluY SINE Alu 1 276 -35 275 64 0 21 chr10 9352549 9352596 -136236692 + (CAAAA)n Simple_repeat Simple_repeat 1 46 0 1256 187 103 54 chr10 9352596 9352814 -136236474 - MER7A DNA MER2_type -2795 243 1 22 35 0 0 chr10 9353777 9353806 -136235482 + AT_rich Low_complexity Low_complexity 1 29 0 548 233 0 6 chr10 9353990 9354153 -136235135 + (TA)n Simple_repeat Simple_repeat 1 162 0 365 104 83 23 chr10 9356380 9356640 -136232648 + (TA)n Simple_repeat Simple_repeat 1 275 0 1419 117 206 8 chr10 9356688 9356936 -136232352 + AluSg1 SINE Alu 1 297 -12 26 74 0 0 chr10 9357269 9357323 -136231965 + AT_rich Low_complexity Low_complexity 1 54 0 216 0 0 0 chr10 9357753 9357777 -136231511 + (TCTA)n Simple_repeat Simple_repeat 4 27 0 2098 97 0 63 chr10 9357788 9358119 -136231169 - AluSx SINE Alu -2 310 1 1296 159 0 9 chr10 9358241 9358461 -136230827 - AluJb SINE Alu 0 312 95 210 260 14 0 chr10 9358555 9358628 -136230660 + (TA)n Simple_repeat Simple_repeat 1 74 0 21 36 0 0 chr10 9359197 9359225 -136230063 + AT_rich Low_complexity Low_complexity 1 28 0 2138 41 0 4 chr10 9359794 9360063 -136229225 + L1PA3 LINE L1 5888 6155 0 2135 119 7 3 chr10 9360314 9360617 -136228671 - AluSq SINE Alu -9 304 1 215 59 0 29 chr10 9360668 9360702 -136228586 + (TG)n Simple_repeat Simple_repeat 2 34 0 2081 102 3 23 chr10 9360753 9361056 -136228232 + AluSc SINE Alu 2 298 -11 24 0 0 0 chr10 9361096 9361120 -136228168 + AT_rich Low_complexity Low_complexity 1 24 0 288 200 0 0 chr10 9361232 9361302 -136227986 + (TATATG)n Simple_repeat Simple_repeat 5 74 0 215 123 0 53 chr10 9361445 9361502 -136227786 + (TA)n Simple_repeat Simple_repeat 2 55 0 741 156 0 0 chr10 9361900 9362028 -136227260 + AluSg/x SINE Alu 184 311 -1 311 210 25 103 chr10 9362779 9362929 -136226359 + HAL1b LINE L1 387 483 -865 2111 92 0 0 chr10 9363322 9363594 -136225694 - AluSg SINE Alu -4 306 35 22 56 0 0 chr10 9363960 9363996 -136225292 + AT_rich Low_complexity Low_complexity 1 36 0 248 315 61 44 chr10 9364041 9364222 -136225066 + MIR SINE MIR 53 236 -26 1921 82 90 4 chr10 9364612 9364879 -136224409 - AluSc SINE Alu -17 292 3 236 357 8 23 chr10 9364932 9365061 -136224227 + MIR3 SINE MIR 40 166 -42 2152 147 65 20 chr10 9365085 9365486 -136223802 + MSTB LTR MaLR 8 426 0 269 306 68 34 chr10 9365922 9366069 -136223219 + MIR3 SINE MIR 32 183 -25 27 0 0 0 chr10 9367237 9367264 -136222024 + AT_rich Low_complexity Low_complexity 1 27 0 460 329 55 21 chr10 9367944 9368181 -136221107 - MIR SINE MIR -16 246 2 361 315 94 71 chr10 9368718 9368972 -136220316 + HAL1 LINE L1 56 315 -2192 646 248 59 101 chr10 9369362 9370003 -136219285 + HAL1 LINE L1 861 1474 -1033 634 220 8 0 chr10 9370004 9370122 -136219166 + FLAM_C SINE Alu 2 120 -13 527 234 48 8 chr10 9370122 9370246 -136219042 + MER58B DNA MER1_type 181 309 -32 241 329 0 14 chr10 9372514 9372584 -136216704 - L2 LINE L2 -18 3254 3186 220 256 64 0 chr10 9372858 9372936 -136216352 + MIR SINE MIR 124 206 -56 2143 68 37 17 chr10 9373084 9373380 -136215908 - AluY SINE Alu -9 302 1 735 263 36 0 chr10 9373439 9373633 -136215655 - MIR SINE MIR -40 222 22 297 0 0 0 chr10 9374669 9374702 -136214586 + (CA)n Simple_repeat Simple_repeat 2 34 0 2152 88 0 18 chr10 9374703 9375017 -136214271 - AluY SINE Alu 0 309 1 260 227 0 82 chr10 9375021 9375118 -136214170 - L1M4 LINE L1 -981 5165 5077 1171 186 53 19 chr10 9375449 9375713 -136213575 + L1 LINE L1 4128 4400 -1746 318 164 0 0 chr10 9375825 9375880 -136213408 - MLT1H LTR MaLR -4 545 491 1311 193 3 67 chr10 9376727 9377027 -136212261 - AluJo SINE Alu -27 285 5 228 35 0 0 chr10 9377051 9377080 -136212208 + (TG)n Simple_repeat Simple_repeat 2 30 0 210 243 40 14 chr10 9377478 9377552 -136211736 - MIR SINE MIR -11 251 176 1736 72 38 0 chr10 9377719 9377955 -136211333 - L1PA7 LINE L1 -11 6143 5899 252 185 0 0 chr10 9378476 9378530 -136210758 + T-rich Low_complexity Low_complexity 1 54 0 498 361 61 4 chr10 9378843 9379073 -136210215 + MIR SINE MIR 2 244 -18 2269 144 67 8 chr10 9379178 9379580 -136209708 - MSTA LTR MaLR 0 428 3 231 329 49 63 chr10 9379758 9379901 -136209387 + L2 LINE L2 3132 3272 0 1520 181 21 91 chr10 9380204 9380445 -136208843 - MLT1B LTR MaLR 0 390 189 438 20 0 0 chr10 9380445 9380496 -136208792 + (TG)n Simple_repeat Simple_repeat 2 52 0 1520 181 21 91 chr10 9380496 9380673 -136208615 - MLT1B LTR MaLR -201 189 1 182 283 28 75 chr10 9381268 9381362 -136207926 - L2 LINE L2 -537 2777 2687 1826 163 0 10 chr10 9381362 9381657 -136207631 + AluJb SINE Alu 1 292 -20 182 283 28 75 chr10 9381657 9381668 -136207620 - L2 LINE L2 -627 2687 2677 293 309 100 0 chr10 9382398 9382508 -136206780 - MER103 DNA DNA -2 164 44 7185 33 2 0 chr10 9382538 9383396 -136205892 + L1PA5 LINE L1 5287 6146 -8 3264 128 27 19 chr10 9384609 9385132 -136204156 - MER1A DNA MER1_type 0 527 1 1830 117 0 78 chr10 9385612 9385941 -136203347 + AluSx SINE Alu 1 305 0 858 199 17 6 chr10 9386275 9386451 -136202837 - AluJb SINE Alu -5 307 130 644 324 65 16 chr10 9386492 9386739 -136202549 + MIR SINE MIR 4 262 0 506 275 31 25 chr10 9388450 9388610 -136200678 - MIR SINE MIR -10 252 92 25 51 0 0 chr10 9389798 9389837 -136199451 + AT_rich Low_complexity Low_complexity 1 39 0 26 30 0 0 chr10 9389909 9389942 -136199346 + AT_rich Low_complexity Low_complexity 1 33 0 4175 190 44 54 chr10 9389946 9390965 -136198323 - L1MB2 LINE L1 -3 6168 5188 2262 95 23 0 chr10 9390965 9391270 -136198018 - AluSx SINE Alu 0 312 1 4175 190 44 54 chr10 9391270 9391541 -136197747 - L1MB2 LINE L1 -983 5188 4916 654 298 36 0 chr10 9391630 9391882 -136197406 - MIR SINE MIR 0 262 2 250 203 14 14 chr10 9391920 9391994 -136197294 + CT-rich Low_complexity Low_complexity 2 75 0 303 181 0 0 chr10 9393828 9393900 -136195388 + GA-rich Low_complexity Low_complexity 1 72 0 24 0 0 0 chr10 9394384 9394408 -136194880 + AT_rich Low_complexity Low_complexity 1 24 0 983 174 25 5 chr10 9396014 9396215 -136193073 - L1MA5A LINE L1 -3 6294 6090 1507 177 50 4 chr10 9396821 9397148 -136192140 - AluJb SINE Alu 0 312 15 323 291 73 33 chr10 9397691 9397842 -136191446 + MER5A DNA MER1_type 1 157 -32 386 333 15 0 chr10 9398088 9398220 -136191068 + L2 LINE L2 3180 3313 0 182 185 0 74 chr10 9398483 9398537 -136190751 - L3 LINE CR1 -1221 356 307 25 0 0 0 chr10 9398681 9398706 -136190582 + AT_rich Low_complexity Low_complexity 1 25 0 1671 159 7 42 chr10 9398706 9399014 -136190274 - AluJo SINE Alu -15 297 1 1448 113 216 9 chr10 9400276 9400531 -136188757 - AluSg1 SINE Alu 0 305 3 454 280 37 53 chr10 9402406 9402595 -136186693 + MIR SINE MIR 21 206 -56 706 226 60 3 chr10 9402616 9402809 -136186479 + L1MA8 LINE L1 6086 6275 -16 1958 193 48 7 chr10 9402926 9403341 -136185947 + MSTB1 LTR MaLR 1 432 0 8889 192 14 10 chr10 9403341 9404972 -136184316 + MSTB-int LTR MaLR 1 1637 -14 2056 204 36 2 chr10 9404983 9405395 -136183893 + MSTB LTR MaLR 1 426 0 269 360 9 9 chr10 9405558 9405672 -136183616 - MIR SINE MIR -71 191 78 892 221 43 14 chr10 9405981 9406189 -136183099 + MST-int LTR MaLR 562 775 -876 180 0 0 0 chr10 9406800 9406820 -136182468 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 204 196 18 18 chr10 9408010 9408066 -136181222 + (TAAA)n Simple_repeat Simple_repeat 2 57 0 2712 187 8 2 chr10 9408178 9408703 -136180585 - L1 LINE L1 -1004 5142 4615 221 96 115 0 chr10 9408986 9409038 -136180250 + (ATATG)n Simple_repeat Simple_repeat 3 60 0 367 388 76 20 chr10 9409160 9409464 -136179824 - L1MEd LINE L1 -5556 563 243 459 257 79 50 chr10 9410032 9410172 -136179116 + MLT1G1 LTR MaLR 448 591 -4 186 312 143 0 chr10 9410375 9410452 -136178836 + L3 LINE CR1 1058 1145 -432 21 0 0 0 chr10 9410953 9410974 -136178314 + AT_rich Low_complexity Low_complexity 1 21 0 348 325 41 0 chr10 9411175 9411298 -136177990 - L2 LINE L2 -9 3304 3177 2316 81 10 3 chr10 9412431 9412728 -136176560 - AluSg SINE Alu -11 299 1 1023 209 4 31 chr10 9412818 9413043 -136176245 + MER20 DNA MER1_type 1 219 0 379 295 108 66 chr10 9413477 9413735 -136175553 - L3 LINE CR1 -2 1575 1307 21 0 0 0 chr10 9414559 9414580 -136174708 + AT_rich Low_complexity Low_complexity 1 21 0 298 260 149 19 chr10 9415146 9415300 -136173988 - MLT1J1 LTR MaLR -272 174 1 2551 97 39 8 chr10 9415757 9416147 -136173141 - L1PA12 LINE L1 -2 6166 5765 556 341 159 24 chr10 9416147 9416726 -136172562 + L2 LINE L2 2661 3313 0 528 101 13 0 chr10 9416878 9416957 -136172331 - MADE1 DNA Mariner 0 80 1 2155 104 7 20 chr10 9418301 9418599 -136170689 + AluSx SINE Alu 1 294 -18 646 345 47 45 chr10 9419998 9420506 -136168782 - HERV16 LTR ERVL -2921 2075 1567 2387 80 10 0 chr10 9420756 9421055 -136168233 - AluSc SINE Alu -7 302 1 211 329 14 0 chr10 9423090 9423160 -136166128 + (TG)n Simple_repeat Simple_repeat 1 71 0 1928 167 0 0 chr10 9425235 9425535 -136163753 - AluSx SINE Alu -12 300 1 1849 132 50 63 chr10 9425742 9426122 -136163166 - THE1C LTR MaLR 0 375 1 4148 110 86 95 chr10 9426767 9428160 -136161128 + pTR5 LTR ERV1 66 2438 0 2056 104 30 7 chr10 9428429 9428726 -136160562 + AluSx SINE Alu 1 304 -8 345 292 17 25 chr10 9428728 9428848 -136160440 - MER5B DNA MER1_type -59 119 1 193 243 84 65 chr10 9430235 9430342 -136158946 + L2 LINE L2 3200 3308 -5 26 0 0 0 chr10 9431081 9431107 -136158181 + AT_rich Low_complexity Low_complexity 1 26 0 560 247 78 119 chr10 9432380 9432731 -136156557 + L1ME LINE L1 11 328 -5742 1832 174 96 34 chr10 9432731 9433138 -136156150 + MSTB1 LTR MaLR 1 432 0 560 247 78 119 chr10 9433138 9433390 -136155898 + L1ME LINE L1 328 589 -5481 763 186 0 0 chr10 9433556 9433680 -136155608 - FLAM_C SINE Alu -19 124 1 2891 280 91 30 chr10 9433680 9436296 -136152992 + L1ME LINE L1 777 3568 -2512 1667 169 72 6 chr10 9436342 9436690 -136152598 + L1MA8 LINE L1 5808 6178 -113 854 205 0 0 chr10 9436857 9437008 -136152280 - FRAM SINE Alu -15 151 1 24 0 0 0 chr10 9437008 9437032 -136152256 + AT_rich Low_complexity Low_complexity 1 24 0 1355 165 0 38 chr10 9437044 9437281 -136152007 - AluJo SINE Alu -84 228 1 2639 33 0 0 chr10 9437856 9438162 -136151126 - AluY SINE Alu -5 306 1 25 0 0 0 chr10 9439802 9439827 -136149461 + AT_rich Low_complexity Low_complexity 1 25 0 1331 216 78 58 chr10 9440779 9441140 -136148148 - MLT1A2 LTR MaLR -1 373 6 459 236 121 50 chr10 9441290 9441472 -136147816 - MIR SINE MIR -27 235 41 451 207 12 18 chr10 9443156 9443325 -136145963 + (TA)n Simple_repeat Simple_repeat 2 169 0 213 180 0 0 chr10 9443364 9443414 -136145874 + (CATA)n Simple_repeat Simple_repeat 2 51 0 2139 99 20 3 chr10 9445060 9445354 -136143934 + AluSg SINE Alu 1 299 -11 319 303 47 57 chr10 9446225 9446436 -136142852 + HAL1b LINE L1 439 647 -701 27 0 0 0 chr10 9446564 9446591 -136142697 + AT_rich Low_complexity Low_complexity 1 27 0 339 300 96 33 chr10 9447193 9447433 -136141855 - MIR SINE MIR 0 262 8 392 308 0 0 chr10 9447462 9447566 -136141722 + L2 LINE L2 3210 3313 0 2005 115 14 0 chr10 9448444 9448774 -136140514 + AluSx SINE Alu 1 334 0 487 104 0 0 chr10 9448873 9448950 -136140338 - Alu SINE Alu -5 305 229 369 0 0 0 chr10 9450093 9450106 -136139182 + (CA)n Simple_repeat Simple_repeat 1 54 0 369 0 0 0 chr10 9450106 9450147 -136139141 + (CA)n Simple_repeat Simple_repeat 2 42 0 920 105 8 0 chr10 9451153 9451277 -136138011 - AluSx SINE Alu -24 286 162 742 133 0 9 chr10 9451277 9451390 -136137898 - AluSx SINE Alu -200 112 1 25 51 0 0 chr10 9452072 9452111 -136137177 + AT_rich Low_complexity Low_complexity 1 39 0 24 0 0 0 chr10 9453685 9453709 -136135579 + AT_rich Low_complexity Low_complexity 1 24 0 27 49 0 0 chr10 9454433 9454474 -136134814 + AT_rich Low_complexity Low_complexity 1 41 0 22 70 0 0 chr10 9454719 9454762 -136134526 + AT_rich Low_complexity Low_complexity 1 43 0 1616 125 29 11 chr10 9455194 9455466 -136133822 + Tigger7 DNA MER2_type 2311 2587 0 27 87 0 0 chr10 9456290 9456359 -136132929 + AT_rich Low_complexity Low_complexity 1 69 0 625 286 95 62 chr10 9457135 9457874 -136131414 - LTR41 LTR ERVL -10 763 1 1230 164 9 14 chr10 9458025 9458244 -136131044 - MER46A DNA MER2_type 0 236 19 773 255 106 64 chr10 9458332 9458708 -136130580 + MLT1J LTR MaLR 79 470 -41 417 177 26 9 chr10 9458818 9458931 -136130357 + CT-rich Low_complexity Low_complexity 3 117 0 1858 156 7 14 chr10 9458933 9459228 -136130060 - AluSq SINE Alu -20 293 1 1097 295 87 2 chr10 9459616 9460009 -136129279 + LTR16A LTR ERVL 22 447 -3 2805 13 0 3 chr10 9460500 9460812 -136128476 + AluYa5 SINE Alu 1 311 0 25 51 0 0 chr10 9461185 9461224 -136128064 + AT_rich Low_complexity Low_complexity 1 39 0 284 332 103 18 chr10 9461673 9461896 -136127392 + MIR SINE MIR 15 256 -6 22 0 0 0 chr10 9462791 9462813 -136126475 + AT_rich Low_complexity Low_complexity 1 22 0 1964 106 32 3 chr10 9464865 9465149 -136124139 + AluSq SINE Alu 1 292 -21 189 0 0 0 chr10 9465446 9465467 -136123821 + (TAA)n Simple_repeat Simple_repeat 3 23 0 272 254 0 15 chr10 9465469 9465536 -136123752 + MLT1E1-int LTR MaLR 1135 1200 -171 1889 223 110 43 chr10 9465649 9466259 -136123029 + MLT1E1 LTR MaLR 1 651 -3 21 0 0 0 chr10 9466730 9466751 -136122537 + AT_rich Low_complexity Low_complexity 1 21 0 21 71 0 0 chr10 9467401 9467443 -136121845 + AT_rich Low_complexity Low_complexity 1 42 0 254 319 30 30 chr10 9467640 9467775 -136121513 - L2 LINE L2 -2 3270 3136 342 0 0 0 chr10 9468275 9468313 -136120975 + (TG)n Simple_repeat Simple_repeat 2 39 0 247 300 0 67 chr10 9469053 9469173 -136120115 - MIR SINE MIR -50 212 101 248 318 190 11 chr10 9469500 9469679 -136119609 + MIR SINE MIR 10 220 -42 223 225 0 0 chr10 9471051 9471091 -136118197 + MIR SINE MIR 48 87 -175 226 316 82 0 chr10 9472205 9472303 -136116985 + MIR SINE MIR 19 124 -84 267 93 0 0 chr10 9478552 9478595 -136110693 + (A)n Simple_repeat Simple_repeat 1 43 0 24 0 0 0 chr10 9479451 9479475 -136109813 + AT_rich Low_complexity Low_complexity 1 24 0 441 272 88 8 chr10 9479813 9479938 -136109350 + MIR3 SINE MIR 42 176 -32 21 71 0 0 chr10 9480060 9480102 -136109186 + AT_rich Low_complexity Low_complexity 1 42 0 226 163 23 0 chr10 9480527 9480570 -136108718 + LTR8A LTR ERV1 207 250 -477 186 43 0 0 chr10 9481474 9481497 -136107791 + (A)n Simple_repeat Simple_repeat 1 23 0 207 0 0 0 chr10 9481500 9481523 -136107765 + (CAGGC)n Simple_repeat Simple_repeat 5 27 0 25 31 0 0 chr10 9483566 9483598 -136105690 + AT_rich Low_complexity Low_complexity 1 32 0 193 323 38 113 chr10 9484175 9484361 -136104927 - MIR SINE MIR -66 196 25 514 288 29 0 chr10 9485108 9485247 -136104041 - MIR SINE MIR -1 261 119 276 91 0 0 chr10 9485259 9485303 -136103985 + (TA)n Simple_repeat Simple_repeat 2 45 0 297 315 67 17 chr10 9485666 9485844 -136103444 - HAL1 LINE L1 -1112 1395 1209 333 0 0 0 chr10 9486034 9486071 -136103217 + (TG)n Simple_repeat Simple_repeat 2 38 0 264 39 19 39 chr10 9486328 9486380 -136102908 + (TTTTG)n Simple_repeat Simple_repeat 2 52 0 2328 71 4 0 chr10 9486382 9486663 -136102625 - AluY SINE Alu -29 282 1 2493 255 40 69 chr10 9488190 9489251 -136100037 + L1MEc LINE L1 29 1059 -5337 989 205 10 29 chr10 9489263 9489468 -136099820 + MLT1D LTR MaLR 1 201 -304 185 65 32 0 chr10 9489469 9489500 -136099788 + (TTTC)n Simple_repeat Simple_repeat 3 34 0 287 111 42 14 chr10 9489532 9489604 -136099684 + CT-rich Low_complexity Low_complexity 3 76 0 886 236 34 61 chr10 9489604 9489668 -136099620 + MLT1D LTR MaLR 214 278 -227 2120 129 7 0 chr10 9489668 9489971 -136099317 + AluSq SINE Alu 1 305 -8 886 236 34 61 chr10 9489971 9490203 -136099085 + MLT1D LTR MaLR 278 502 -3 689 280 70 14 chr10 9490204 9490490 -136098798 + L1MEc LINE L1 1072 1373 -5023 963 272 191 8 chr10 9490585 9491187 -136098101 + L1MEc LINE L1 1552 2263 -4133 32 57 0 0 chr10 9491195 9491248 -136098040 + AT_rich Low_complexity Low_complexity 1 53 0 21 36 0 0 chr10 9491515 9491543 -136097745 + AT_rich Low_complexity Low_complexity 1 28 0 255 327 26 9 chr10 9491544 9491657 -136097631 + L2 LINE L2 2274 2388 -926 6512 200 19 16 chr10 9491966 9493983 -136095305 + L1MA2 LINE L1 3176 5203 -2362 2474 192 12 2 chr10 9493981 9494475 -136094813 + L1MA2 LINE L1 6041 6539 -1026 * 2178 111 3 6 chr10 9494458 9494774 -136094514 + L1MA2 LINE L1 6894 7208 -515 * 347 179 17 103 chr10 9495064 9495181 -136094107 + MER112 DNA MER1_type 2 108 -152 2489 132 2 32 chr10 9495198 9495504 -136093784 + L1MA2 LINE L1 7190 7481 -242 2485 71 0 0 chr10 9495504 9495814 -136093474 + AluSg SINE Alu 1 310 0 2489 132 2 32 chr10 9495814 9495946 -136093342 + L1MA2 LINE L1 7481 7615 -108 26 0 0 0 chr10 9496077 9496103 -136093185 + AT_rich Low_complexity Low_complexity 1 26 0 2309 97 3 0 chr10 9498489 9498797 -136090491 - AluY SINE Alu -2 309 1 186 133 0 0 chr10 9499026 9499056 -136090232 + (T)n Simple_repeat Simple_repeat 1 30 0 1156 117 0 0 chr10 9499772 9499935 -136089353 + AluSq SINE Alu 137 299 -14 181 341 55 82 chr10 9499950 9500243 -136089045 - L2 LINE L2 -2 3270 2986 21 36 0 0 chr10 9501705 9501733 -136087555 + AT_rich Low_complexity Low_complexity 1 28 0 1703 96 17 0 chr10 9502622 9502861 -136086427 - L1PA10 LINE L1 -14 6154 5912 311 325 0 0 chr10 9503299 9503382 -136085906 + L2 LINE L2 2225 2307 -1007 445 325 64 11 chr10 9503461 9503649 -136085639 + MIR SINE MIR 65 262 0 226 363 11 28 chr10 9503661 9503840 -136085448 + L2 LINE L2 2323 2498 -816 185 360 88 20 chr10 9503940 9504087 -136085201 + L2 LINE L2 2631 2787 -527 23 68 0 0 chr10 9504597 9504641 -136084647 + AT_rich Low_complexity Low_complexity 1 44 0 255 336 153 15 chr10 9507422 9507559 -136081729 + L2 LINE L2 3116 3271 -1 211 179 36 0 chr10 9508562 9508618 -136080670 + (TA)n Simple_repeat Simple_repeat 2 59 0 21 0 0 0 chr10 9509720 9509741 -136079547 + AT_rich Low_complexity Low_complexity 1 21 0 531 0 0 0 chr10 9511220 9511279 -136078009 + (CA)n Simple_repeat Simple_repeat 2 60 0 1899 86 3 86 chr10 9511286 9511590 -136077698 - AluSg SINE Alu -31 279 1 1317 177 50 0 chr10 9512051 9512361 -136076927 - L1P LINE L1 -759 5406 5086 3300 107 2 4 chr10 9512361 9512855 -136076433 + L1PA13 LINE L1 5669 6163 0 235 149 0 30 chr10 9513420 9513487 -136075801 + (CA)n Simple_repeat Simple_repeat 2 66 0 23 33 0 0 chr10 9514198 9514228 -136075060 + AT_rich Low_complexity Low_complexity 1 30 0 2801 179 21 40 chr10 9514932 9515973 -136073315 - L1MA10 LINE L1 -373 5795 4781 266 208 0 0 chr10 9515970 9516023 -136073265 + L1MA10 LINE L1 5786 5838 -474 * 191 61 30 0 chr10 9516028 9516061 -136073227 + (TTTTTG)n Simple_repeat Simple_repeat 3 36 0 6451 102 32 110 chr10 9516065 9517489 -136071799 - SVA Other Other -17 1369 57 917 106 0 22 chr10 9517489 9517669 -136071619 + (GGGAGA)n Simple_repeat Simple_repeat 5 180 0 1969 212 56 30 chr10 9517774 9518125 -136071163 + L1MA10 LINE L1 5820 6190 -144 1989 117 22 0 chr10 9518125 9518420 -136070868 + AluSq SINE Alu 5 305 0 1969 212 56 30 chr10 9518420 9518568 -136070720 + L1MA10 LINE L1 6190 6333 -1 189 0 0 0 chr10 9518873 9518894 -136070394 + (CCA)n Simple_repeat Simple_repeat 2 22 0 700 271 140 13 chr10 9519476 9519705 -136069583 + MIR SINE MIR 5 262 0 180 0 0 0 chr10 9519993 9520013 -136069275 + (TG)n Simple_repeat Simple_repeat 2 21 0 333 0 0 0 chr10 9520248 9520285 -136069003 + (TG)n Simple_repeat Simple_repeat 2 38 0 1998 136 0 3 chr10 9520286 9520572 -136068716 - AluSx SINE Alu -27 285 1 329 321 78 10 chr10 9520902 9521095 -136068193 + L1MC4a LINE L1 5791 5996 -1812 228 68 0 68 chr10 9522195 9522254 -136067034 + (TTTTTG)n Simple_repeat Simple_repeat 2 56 0 2135 100 4 0 chr10 9522879 9523183 -136066105 + AluSx SINE Alu 13 317 0 387 0 0 0 chr10 9523500 9523543 -136065745 + (TTA)n Simple_repeat Simple_repeat 2 44 0 2776 104 15 5 chr10 9523545 9523947 -136065341 - L1PA11 LINE L1 -15 6159 5754 26 0 0 0 chr10 9524973 9524999 -136064289 + AT_rich Low_complexity Low_complexity 1 26 0 439 261 56 0 chr10 9526269 9526411 -136062877 - MER104 DNA Tc2 -30 150 1 2401 80 0 19 chr10 9526454 9526765 -136062523 - AluSg1 SINE Alu -4 305 1 616 184 0 0 chr10 9527399 9527502 -136061786 - FLAM_A SINE Alu -18 124 22 30 0 0 0 chr10 9529596 9529626 -136059662 + AT_rich Low_complexity Low_complexity 1 30 0 186 43 0 0 chr10 9529659 9529682 -136059606 + (CAAAA)n Simple_repeat Simple_repeat 5 27 0 23 0 0 0 chr10 9530567 9530590 -136058698 + AT_rich Low_complexity Low_complexity 1 23 0 316 295 14 65 chr10 9530912 9531051 -136058237 - L2 LINE L2 0 3313 3182 394 301 51 59 chr10 9531646 9531882 -136057406 + L2 LINE L2 3072 3305 -8 407 216 21 21 chr10 9532009 9532106 -136057182 - MLT1J2 LTR MaLR -284 166 70 768 136 0 64 chr10 9532115 9532255 -136057033 + FLAM_C SINE Alu 3 133 0 24 0 0 0 chr10 9532712 9532736 -136056552 + AT_rich Low_complexity Low_complexity 1 24 0 263 279 37 62 chr10 9533098 9533245 -136056043 + L2 LINE L2 3156 3300 -13 216 67 0 0 chr10 9533245 9533275 -136056013 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 263 279 37 62 chr10 9533275 9533288 -136056000 + L2 LINE L2 3300 3312 -1 186 103 0 0 chr10 9533376 9533405 -136055883 + (TC)n Simple_repeat Simple_repeat 2 30 0 248 277 74 74 chr10 9533777 9533979 -136055309 - MER112 DNA MER1_type -9 251 50 601 277 66 21 chr10 9535546 9535788 -136053500 + MIR SINE MIR 10 262 0 41 48 0 0 chr10 9535954 9536016 -136053272 + AT_rich Low_complexity Low_complexity 1 62 0 332 211 28 110 chr10 9536026 9536060 -136053228 + MARNA DNA Mariner 119 154 -432 264 59 0 0 chr10 9536060 9536094 -136053194 + (TA)n Simple_repeat Simple_repeat 2 35 0 2056 112 14 11 chr10 9536094 9536381 -136052907 - AluSq SINE Alu -25 288 1 332 211 28 110 chr10 9536381 9536454 -136052834 + MARNA DNA Mariner 152 218 -368 3326 136 20 36 chr10 9536462 9536746 -136052542 + L1MA8 LINE L1 5668 5955 -336 2224 100 0 3 chr10 9536746 9537037 -136052251 + AluSg SINE Alu 6 295 -15 3326 136 20 36 chr10 9537037 9537386 -136051902 + L1MA8 LINE L1 5955 6291 0 879 254 5 10 chr10 9537579 9537788 -136051500 - MER58A DNA MER1_type -16 208 1 495 294 44 6 chr10 9538298 9538458 -136050830 - MIR3 SINE MIR -11 197 32 21 0 0 0 chr10 9539556 9539577 -136049711 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr10 9540728 9540765 -136048523 + AT_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr10 9542187 9542210 -136047078 + AT_rich Low_complexity Low_complexity 1 23 0 2189 108 7 0 chr10 9543028 9543335 -136045953 + AluSq SINE Alu 1 309 -4 264 326 26 34 chr10 9544022 9544180 -136045108 - MIR SINE MIR -81 127 17 742 186 36 7 chr10 9544415 9544555 -136044733 - FRAM SINE Alu -26 150 7 22 56 0 0 chr10 9544675 9544711 -136044577 + AT_rich Low_complexity Low_complexity 1 36 0 286 211 32 84 chr10 9546107 9546202 -136043086 - MIR3 SINE MIR -21 187 98 211 322 20 74 chr10 9546872 9547021 -136042267 + L2 LINE L2 1803 1943 -1371 369 324 17 56 chr10 9547153 9547332 -136041956 + LTR16A LTR ERVL 198 369 -81 1001 223 96 98 chr10 9547437 9547864 -136041424 + MSTA LTR MaLR 1 426 -2 430 53 80 53 chr10 9548269 9548344 -136040944 + MADE1 DNA Mariner 4 80 0 197 108 27 0 chr10 9548688 9548725 -136040563 + (CTTTG)n Simple_repeat Simple_repeat 2 39 0 5466 102 16 5 chr10 9549512 9550317 -136038971 + L1PA13 LINE L1 5348 6161 -2 190 323 183 11 chr10 9550844 9550937 -136038351 + MIR3 SINE MIR 46 154 -54 261 229 104 31 chr10 9553071 9553167 -136036121 - L2 LINE L2 -10 3303 3201 420 287 72 24 chr10 9553268 9553435 -136035853 + MER5B DNA MER1_type 1 175 -3 261 179 0 119 chr10 9553445 9553512 -136035776 + L2 LINE L2 3213 3271 -1 2218 124 0 0 chr10 9554291 9554589 -136034699 + AluSx SINE Alu 1 298 -14 522 311 34 10 chr10 9555348 9555557 -136033731 + L1MC4 LINE L1 6459 6672 -1370 566 306 52 9 chr10 9557743 9557972 -136031316 - HERV16 LTR ERVL -2550 3104 2866 334 345 6 24 chr10 9558303 9558471 -136030817 - HERV16 LTR ERVL -3194 2460 2296 2299 113 54 6 chr10 9558482 9558835 -136030453 - THE1C LTR MaLR -3 372 3 355 386 33 39 chr10 9559274 9559694 -136029594 - HERV16 LTR ERVL -3425 1571 1323 252 308 130 35 chr10 9560576 9560745 -136028543 + L2 LINE L2 3109 3293 -20 24 0 0 0 chr10 9561097 9561121 -136028167 + AT_rich Low_complexity Low_complexity 1 24 0 1369 239 15 39 chr10 9561475 9561602 -136027686 + L1MB7 LINE L1 5789 5917 -267 2173 100 17 7 chr10 9561602 9561902 -136027386 - AluSx SINE Alu -9 303 1 1369 239 15 39 chr10 9561902 9562163 -136027125 + L1MB7 LINE L1 5917 6168 -16 312 322 20 0 chr10 9562244 9562443 -136026845 + L1M4 LINE L1 2349 2551 -3595 258 182 26 13 chr10 9562548 9562625 -136026663 + (CATATA)n Simple_repeat Simple_repeat 2 79 0 322 259 130 19 chr10 9562625 9562787 -136026501 + L1MCa LINE L1 2017 2196 -4230 517 248 30 0 chr10 9562819 9562952 -136026336 + L1MC3 LINE L1 6599 6735 -1050 316 211 32 16 chr10 9562956 9563079 -136026209 + L1MB7 LINE L1 6058 6182 -2 186 103 0 0 chr10 9564343 9564372 -136024916 + (TCCC)n Simple_repeat Simple_repeat 3 31 0 1038 104 6 22 chr10 9564384 9564567 -136024721 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 22 0 0 0 chr10 9565050 9565072 -136024216 + AT_rich Low_complexity Low_complexity 1 22 0 215 246 0 18 chr10 9567009 9567066 -136022222 + (CATA)n Simple_repeat Simple_repeat 3 58 0 248 245 161 59 chr10 9567067 9567353 -136021935 - L1MC4 LINE L1 -131 7911 7597 454 301 21 36 chr10 9567389 9567582 -136021706 - L1MC4a LINE L1 -393 7415 7226 2294 89 3 3 chr10 9568165 9568469 -136020819 + AluSp SINE Alu 1 304 -9 330 317 147 75 chr10 9569911 9570383 -136018905 - L1MEd LINE L1 -730 1760 1139 190 56 56 0 chr10 9570383 9570419 -136018869 + (TA)n Simple_repeat Simple_repeat 1 38 0 330 317 147 75 chr10 9570419 9570592 -136018696 - L1MEd LINE L1 -1351 1139 980 345 200 38 25 chr10 9571472 9571552 -136017736 + MLT1J LTR MaLR 100 180 -331 2134 120 0 3 chr10 9571595 9571903 -136017385 + AluSc SINE Alu 1 307 -2 1099 211 19 42 chr10 9572369 9572629 -136016659 + L1M4 LINE L1 4536 4789 -1357 2050 127 37 0 chr10 9572948 9573247 -136016041 + AluSq SINE Alu 2 311 -2 2114 171 88 0 chr10 9573724 9574110 -136015178 + MSTB LTR MaLR 3 422 -4 824 110 0 0 chr10 9574730 9574839 -136014449 + AluSq SINE Alu 105 213 -100 870 230 61 9 chr10 9575502 9575732 -136013556 - L1MB8 LINE L1 -6 6172 5931 1585 58 98 146 chr10 9575738 9576067 -136013221 - AluY SINE Alu 0 315 1 190 235 44 44 chr10 9576409 9576477 -136012811 - MIR SINE MIR 0 262 195 22 35 0 0 chr10 9576487 9576516 -136012772 + AT_rich Low_complexity Low_complexity 1 29 0 2009 105 15 52 chr10 9576972 9577296 -136011992 - AluSx SINE Alu 0 312 1 201 362 148 0 chr10 9577740 9577889 -136011399 - L2 LINE L2 -448 2866 2696 983 217 29 16 chr10 9577894 9578138 -136011150 + MLT1A1 LTR MaLR 2 248 -117 192 250 17 50 chr10 9578316 9578376 -136010912 + MIR SINE MIR 205 262 0 491 216 9 38 chr10 9578422 9578553 -136010735 + MLT1A1 LTR MaLR 250 365 0 433 370 56 40 chr10 9578574 9579055 -136010233 - L2 LINE L2 -639 2675 2187 449 324 48 67 chr10 9579063 9579378 -136009910 + L2 LINE L2 2961 3269 -3 2062 120 6 43 chr10 9579388 9579737 -136009551 + L1MA9 LINE L1 5447 5782 -509 3750 112 0 15 chr10 9579760 9580295 -136008993 - MER1A DNA MER1_type 0 527 1 2531 169 31 10 chr10 9580351 9580872 -136008416 + L1MA9 LINE L1 5781 6312 0 407 313 95 29 chr10 9582004 9582438 -136006850 - LTR33 LTR ERVL -2 519 24 507 189 29 11 chr10 9582577 9582668 -136006620 + (TAGA)n Simple_repeat Simple_repeat 3 91 -89 1944 201 6 6 chr10 9582668 9583032 -136006256 + MLT1A1 LTR MaLR 2 365 0 507 189 29 11 chr10 9583032 9583115 -136006173 + (TAGA)n Simple_repeat Simple_repeat 91 180 0 268 193 0 133 chr10 9583142 9583225 -136006063 - MLT2C1 LTR ERVL -50 347 276 546 185 67 8 chr10 9583549 9583668 -136005620 - MSTB1 LTR MaLR -2 430 305 283 103 69 0 chr10 9583647 9583705 -136005583 + AluYb8 SINE Alu 243 304 -4 * 324 314 102 28 chr10 9584165 9584448 -136004840 + L1M4 LINE L1 4247 4550 -1596 1264 107 58 0 chr10 9584471 9584677 -136004611 + L1MA1 LINE L1 6085 6302 0 238 139 38 25 chr10 9585823 9585902 -136003386 + GA-rich Low_complexity Low_complexity 2 81 0 2182 117 3 3 chr10 9587342 9587640 -136001648 - AluSq SINE Alu -15 298 1 683 301 58 62 chr10 9587780 9588279 -136001009 - LTR67 LTR ERVL -22 535 39 440 273 41 78 chr10 9588337 9588579 -136000709 - L2 LINE L2 -4 3309 3077 2022 124 41 0 chr10 9588800 9589090 -136000198 - AluSx SINE Alu -10 302 1 3943 223 89 96 chr10 9589095 9591215 -135998073 - L1MCa LINE L1 -2805 3621 1487 2259 113 33 33 chr10 9591215 9591579 -135997709 + THE1B LTR MaLR 1 364 0 3943 223 89 96 chr10 9591579 9592836 -135996452 - L1MCa LINE L1 -4939 1487 263 2143 129 134 3 chr10 9592836 9593209 -135996079 - MSTA LTR MaLR -2 426 5 3943 223 89 96 chr10 9593209 9593337 -135995951 - L1MCa LINE L1 -6163 263 136 2156 131 3 10 chr10 9593350 9593664 -135995624 - AluSx SINE Alu 0 312 1 2057 140 10 0 chr10 9593709 9594017 -135995271 + AluSq SINE Alu 1 311 -2 745 317 101 29 chr10 9594019 9594435 -135994853 - LTR67 LTR ERVL -79 478 33 1539 213 44 49 chr10 9595178 9595567 -135993721 + MLT1B LTR MaLR 1 387 -3 397 298 43 6 chr10 9596518 9596679 -135992609 - MER110A LTR ERV1 0 468 302 2383 80 0 3 chr10 9596699 9597011 -135992277 + AluY SINE Alu 1 311 0 308 149 0 15 chr10 9597024 9597091 -135992197 + (TA)n Simple_repeat Simple_repeat 2 67 0 395 247 92 35 chr10 9597092 9597266 -135992022 + L1MB7 LINE L1 1706 1889 -4495 2329 216 82 55 chr10 9597310 9597702 -135991586 + L1MB7 LINE L1 5085 5465 -955 1739 173 14 3 chr10 9597702 9597985 -135991303 + AluJb SINE Alu 1 286 -26 2329 216 82 55 chr10 9597985 9598752 -135990536 + L1MB7 LINE L1 5465 6420 0 718 287 78 29 chr10 9599471 9599715 -135989573 + MIR SINE MIR 2 257 -5 2042 106 51 7 chr10 9599804 9600096 -135989192 + AluSg SINE Alu 1 305 -5 1984 127 43 0 chr10 9600584 9600883 -135988405 - AluSx SINE Alu 0 312 1 475 119 10 69 chr10 9601576 9601677 -135987611 - L1MA6 LINE L1 -303 5997 5903 1613 156 13 42 chr10 9602183 9602490 -135986798 + Tigger2a DNA MER2_type 2 299 -135 534 109 10 69 chr10 9602521 9602622 -135986666 - L1MA6 LINE L1 -303 5997 5903 2358 104 0 0 chr10 9603016 9603324 -135985964 + AluSg SINE Alu 1 308 -2 183 333 0 0 chr10 9603346 9603388 -135985900 + MIR SINE MIR 23 64 -198 243 174 10 82 chr10 9603398 9603496 -135985792 - L1MC4 LINE L1 -1338 6704 6614 238 213 16 31 chr10 9603501 9603763 -135985525 + (TA)n Simple_repeat Simple_repeat 1 257 0 180 77 0 0 chr10 9604369 9604395 -135984893 + (TC)n Simple_repeat Simple_repeat 1 26 0 2030 134 17 0 chr10 9604395 9604686 -135984602 - AluSx SINE Alu -8 304 9 1736 156 64 37 chr10 9606128 9606456 -135982832 + MER1B DNA MER1_type 1 337 0 235 209 314 0 chr10 9607214 9607300 -135981988 + MIR SINE MIR 128 240 -22 300 266 75 75 chr10 9607409 9607608 -135981680 + MLT1K LTR MaLR 349 547 -41 1811 133 14 0 chr10 9607722 9608023 -135981265 - AluSx SINE Alu 0 305 1 189 349 0 32 chr10 9608121 9608184 -135981104 - L2 LINE L2 -76 3196 3136 319 242 31 47 chr10 9608756 9608792 -135980496 + CT-rich Low_complexity Low_complexity 3 38 -90 2735 88 3 0 chr10 9608792 9609155 -135980133 + THE1B LTR MaLR 1 364 0 319 242 31 47 chr10 9609155 9609246 -135980042 + CT-rich Low_complexity Low_complexity 38 128 0 905 118 0 7 chr10 9609259 9609411 -135979877 + (TTC)n Simple_repeat Simple_repeat 2 152 0 2121 133 7 0 chr10 9609450 9609752 -135979536 + AluSx SINE Alu 1 304 -8 256 345 53 35 chr10 9610082 9610195 -135979093 - L2 LINE L2 -21 3251 3137 1284 212 75 47 chr10 9610341 9610700 -135978588 - MLT1A2 LTR MaLR -5 369 1 869 218 17 6 chr10 9610882 9611056 -135978232 - MER5A DNA MER1_type -5 184 9 940 247 60 33 chr10 9611078 9611378 -135977910 + L1ME3A LINE L1 5805 6112 -58 187 404 27 76 chr10 9611449 9611672 -135977616 - L2 LINE L2 -11 3261 3050 2667 227 64 112 chr10 9612406 9613512 -135975776 - L1MC/D LINE L1 -743 5797 5002 189 0 0 0 chr10 9613512 9613533 -135975755 + (TG)n Simple_repeat Simple_repeat 2 22 0 2667 227 64 112 chr10 9613533 9614415 -135974873 - L1MC/D LINE L1 -1538 5002 4079 221 56 0 28 chr10 9614415 9614451 -135974837 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 7120 24 0 0 chr10 9614451 9615273 -135974015 - L1PA3 LINE L1 -24 6131 5310 * 9877 24 2 0 chr10 9615271 9616447 -135972841 + L1PA3 LINE L1 4125 5302 -844 509 254 55 22 chr10 9616447 9616628 -135972660 - L1MC/D LINE L1 -2449 4091 3905 541 228 17 70 chr10 9616632 9616873 -135972415 - L1MC/D LINE L1 -4809 1731 1504 1274 217 23 23 chr10 9616988 9617287 -135972001 - L1MB8 LINE L1 -9 6169 5871 262 333 0 0 chr10 9617591 9617660 -135971628 - LTR16A LTR ERVL -122 328 260 * 516 208 0 0 chr10 9617659 9617765 -135971523 + Cheshire DNA MER1_type 717 822 -1598 303 273 0 0 chr10 9617797 9617863 -135971425 - Tigger5 DNA MER2_type 0 2323 2258 * 304 146 21 0 chr10 9617859 9617907 -135971381 + Tigger5 DNA MER2_type 2272 2320 -3 * 378 222 0 25 chr10 9617907 9617987 -135971301 - Tigger5 DNA MER2_type -2245 78 1 1047 94 0 0 chr10 9617997 9618156 -135971132 + L1MA8 LINE L1 6130 6288 -3 6576 194 36 12 chr10 9618156 9619607 -135969681 + Cheshire DNA MER1_type 847 2333 -87 270 395 8 0 chr10 9620302 9620421 -135968867 - ERVL LTR ERVL -2263 3501 3382 864 371 89 12 chr10 9620441 9621193 -135968095 - ERVL LTR ERVL -2972 2792 1983 463 139 13 0 chr10 9621414 9621493 -135967795 + MADE1 DNA Mariner 1 80 0 414 0 0 0 chr10 9621682 9621728 -135967560 + (TG)n Simple_repeat Simple_repeat 2 47 0 291 332 88 36 chr10 9621750 9622024 -135967264 - ERVL LTR ERVL -4084 1680 1393 2313 142 81 51 chr10 9622771 9623265 -135966023 - LTR22 LTR ERVK 0 509 1 423 302 85 32 chr10 9623882 9623952 -135965336 - LTR33 LTR ERVL -242 279 214 2048 185 80 74 chr10 9623952 9624503 -135964785 + MLT2B3 LTR ERVL 1 554 0 423 302 85 32 chr10 9624503 9624680 -135964608 - LTR33 LTR ERVL -307 214 19 304 336 79 57 chr10 9624996 9625666 -135963622 + L1MEd LINE L1 100 784 -5335 180 0 0 0 chr10 9627968 9627988 -135961300 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 2057 155 3 23 chr10 9628367 9628716 -135960572 - MER7A DNA MER2_type -1 345 6 274 237 40 0 chr10 9629371 9629447 -135959841 + (CATA)n Simple_repeat Simple_repeat 4 82 0 443 166 30 12 chr10 9629448 9629617 -135959671 + (TA)n Simple_repeat Simple_repeat 2 173 0 298 88 77 11 chr10 9631385 9631476 -135957812 + (TA)n Simple_repeat Simple_repeat 2 98 0 269 156 78 7 chr10 9631673 9631827 -135957461 + (TA)n Simple_repeat Simple_repeat 2 166 0 419 130 82 14 chr10 9631862 9632147 -135957141 + (TA)n Simple_repeat Simple_repeat 1 304 0 1076 59 0 0 chr10 9632147 9632282 -135957006 + MER85 DNA T2_type 4 138 -1 279 94 94 0 chr10 9632376 9632472 -135956816 + (TA)n Simple_repeat Simple_repeat 1 105 0 201 343 96 22 chr10 9634862 9635040 -135954248 - L2 LINE L2 -1291 2023 1833 1983 143 7 3 chr10 9635116 9635410 -135953878 + AluSx SINE Alu 1 295 -17 4064 153 20 6 chr10 9635504 9636198 -135953090 - MER50 LTR ERV1 -30 704 1 35 63 0 0 chr10 9636410 9636473 -135952815 + AT_rich Low_complexity Low_complexity 1 63 0 1111 219 29 21 chr10 9636950 9637229 -135952059 + MER89 LTR ERV1 279 559 0 2054 116 7 3 chr10 9637270 9637577 -135951711 + AluSq SINE Alu 1 308 0 1427 201 22 43 chr10 9637829 9638198 -135951090 - MLT1A1 LTR MaLR 0 365 5 515 241 35 14 chr10 9639483 9639628 -135949660 - MIR SINE MIR -6 256 109 233 213 32 32 chr10 9640361 9640455 -135948833 + A-rich Low_complexity Low_complexity 4 97 0 315 309 46 40 chr10 9640952 9641104 -135948184 + HAL1b LINE L1 684 836 -512 1482 279 79 37 chr10 9641182 9642060 -135947228 - L1MEc LINE L1 -3563 2652 1754 1982 148 3 3 chr10 9642060 9642371 -135946917 - AluSx SINE Alu -1 311 1 1482 279 79 37 chr10 9642371 9642661 -135946627 - L1MEc LINE L1 -4461 1754 1477 259 331 47 54 chr10 9642846 9642994 -135946294 - L2 LINE L2 -1 3271 3125 184 109 22 22 chr10 9643271 9643317 -135945971 + A-rich Low_complexity Low_complexity 2 47 0 234 0 0 0 chr10 9644140 9644166 -135945122 + (GA)n Simple_repeat Simple_repeat 1 26 0 1826 122 0 4 chr10 9644346 9644593 -135944695 - AluSg SINE Alu -35 275 30 918 86 0 0 chr10 9644696 9644824 -135944464 - L1PA6 LINE L1 0 6154 6027 413 227 0 24 chr10 9644906 9645049 -135944239 + Tigger5 DNA MER2_type 1 193 -2130 439 189 0 0 chr10 9645052 9645126 -135944162 + Tigger5 DNA MER2_type 2250 2323 0 312 118 0 108 chr10 9645535 9645594 -135943694 + AluSx SINE Alu 1 44 -258 510 46 0 0 chr10 9645594 9645659 -135943629 + (TC)n Simple_repeat Simple_repeat 1 65 0 7448 62 42 2 chr10 9645683 9646353 -135942935 + LTR13 LTR ERVK 1 723 -284 213 39 0 0 chr10 9646353 9646379 -135942909 + (TC)n Simple_repeat Simple_repeat 2 27 0 7448 62 42 2 chr10 9646379 9646676 -135942612 + LTR13 LTR ERVK 723 1007 0 1592 157 4 0 chr10 9646938 9647187 -135942101 + AluSx SINE Alu 61 310 -2 1338 254 11 14 chr10 9647195 9647557 -135941731 + MLT1A1 LTR MaLR 5 365 0 26 0 0 0 chr10 9648854 9648880 -135940408 + AT_rich Low_complexity Low_complexity 1 26 0 966 92 7 7 chr10 9649370 9649511 -135939777 + L1PA11 LINE L1 6031 6171 -3 1333 221 17 20 chr10 9649700 9649994 -135939294 + AluJb SINE Alu 1 293 -19 235 209 314 0 chr10 9651732 9651818 -135937470 + MIR SINE MIR 128 240 -22 300 266 75 75 chr10 9651927 9652126 -135937162 + MLT1K LTR MaLR 349 547 -41 1798 137 14 0 chr10 9652240 9652544 -135936744 - AluSx SINE Alu 0 308 1 294 316 129 71 chr10 9652642 9652848 -135936440 - L2 LINE L2 -76 3237 3044 2202 126 0 0 chr10 9652848 9653158 -135936130 + AluSx SINE Alu 1 310 -2 294 316 129 71 chr10 9653158 9653347 -135935941 - L2 LINE L2 -269 3044 2819 2163 97 28 3 chr10 9653572 9653862 -135935426 + AluSx SINE Alu 1 297 -15 1917 102 0 4 chr10 9654498 9654752 -135934536 - AluSc SINE Alu -17 292 40 241 238 48 12 chr10 9654898 9654982 -135934306 + L1MC4 LINE L1 6609 6695 -1347 310 319 60 19 chr10 9655147 9655381 -135933907 - HERV16 LTR ERVL -2359 2637 2390 821 156 78 28 chr10 9655593 9655773 -135933515 + MLT1B LTR MaLR 1 189 -201 11675 81 1 19 chr10 9655832 9657395 -135931893 + HERVL-A1 LTR ERVL 4119 5654 0 2917 71 20 8 chr10 9657395 9657789 -135931499 + MLT2A1 LTR ERVL 1 399 -45 333 276 155 30 chr10 9657887 9658152 -135931136 + L1MC5 LINE L1 7627 7924 -37 41 58 0 0 chr10 9658887 9658956 -135930332 + AT_rich Low_complexity Low_complexity 1 69 0 13872 154 16 11 chr10 9658956 9661362 -135927926 + Tigger1 DNA MER2_type 1 2418 0 2310 85 0 3 chr10 9661490 9661783 -135927505 - AluSg SINE Alu -18 292 1 1249 286 167 20 chr10 9661801 9662592 -135926696 + L2 LINE L2 2258 3165 -148 325 301 71 27 chr10 9664951 9665134 -135924154 + MIR SINE MIR 72 262 0 24 0 0 0 chr10 9665884 9665908 -135923380 + AT_rich Low_complexity Low_complexity 1 24 0 608 327 19 56 chr10 9666030 9666406 -135922882 + L1MEc LINE L1 109 470 -5926 350 198 135 10 chr10 9666431 9666527 -135922761 - L1MEc LINE L1 -4623 1773 1666 * 912 225 67 101 chr10 9666524 9666677 -135922611 - L1M4 LINE L1 -912 5234 5077 1987 129 7 3 chr10 9666677 9666964 -135922324 - AluSx SINE Alu -24 288 1 912 225 67 101 chr10 9666964 9667317 -135921971 - L1M4 LINE L1 -1069 5077 4745 443 279 118 42 chr10 9667342 9667579 -135921709 - L1M4 LINE L1 -2800 3346 3092 1065 304 56 20 chr10 9667659 9668271 -135921017 + L1MEc LINE L1 498 1131 -5265 1456 241 98 18 chr10 9668271 9668840 -135920448 - L1M4 LINE L1 -3168 2978 2364 438 302 131 20 chr10 9669030 9669374 -135919914 + L1MEc LINE L1 1220 1601 -4614 41 48 0 0 chr10 9669423 9669485 -135919803 + AT_rich Low_complexity Low_complexity 1 62 0 189 74 0 0 chr10 9669495 9669522 -135919766 + (TAGA)n Simple_repeat Simple_repeat 4 30 0 3935 78 0 4 chr10 9669530 9670043 -135919245 - MER9 LTR ERVK 0 511 1 424 387 30 0 chr10 9670429 9670597 -135918691 + MER115 DNA AcHobo 170 342 -351 563 269 75 0 chr10 9670696 9670856 -135918432 + MER115 DNA AcHobo 522 693 0 26 0 0 0 chr10 9671123 9671149 -135918139 + AT_rich Low_complexity Low_complexity 1 26 0 1654 213 77 0 chr10 9671813 9672189 -135917099 - MER74A LTR ERVL -26 532 128 2125 150 25 11 chr10 9672264 9672623 -135916665 + THE1B LTR MaLR 1 364 0 206 125 0 25 chr10 9674019 9674059 -135915229 + (GGAA)n Simple_repeat Simple_repeat 3 41 0 587 179 0 0 chr10 9675348 9675471 -135913817 - L1MA4 LINE L1 -239 6061 5939 1129 154 21 17 chr10 9675476 9675709 -135913579 + L1MA4 LINE L1 6067 6300 0 2300 125 23 0 chr10 9675867 9676211 -135913077 - THE1B LTR MaLR 0 364 13 204 40 0 0 chr10 9676502 9676527 -135912761 + (TG)n Simple_repeat Simple_repeat 2 26 0 413 349 28 25 chr10 9678910 9679234 -135910054 - L1ME LINE L1 -372 5749 5425 491 266 36 85 chr10 9679823 9680184 -135909104 - MLT2C1 LTR ERVL -43 620 18 1135 164 65 104 chr10 9683476 9683861 -135905427 - LTR25 LTR ERV1 -10 784 415 273 197 136 0 chr10 9683829 9683895 -135905393 - MER51A LTR ERV1 -351 283 209 * 310 235 42 18 chr10 9684062 9684174 -135905114 - MER61E LTR ERV1 -484 85 1 872 239 110 0 chr10 9684254 9684589 -135904699 + Charlie1 DNA MER1_type 2390 2761 0 360 43 0 0 chr10 9684724 9684770 -135904518 + (TG)n Simple_repeat Simple_repeat 2 47 0 245 271 0 0 chr10 9684828 9684887 -135904401 - L2 LINE L2 0 3313 3255 699 230 58 26 chr10 9685332 9685523 -135903765 + MIR SINE MIR 2 198 -64 24 0 0 0 chr10 9685583 9685607 -135903681 + AT_rich Low_complexity Low_complexity 1 24 0 401 282 92 14 chr10 9685773 9685915 -135903373 + L3 LINE CR1 677 829 -748 183 336 198 0 chr10 9685957 9686073 -135903215 + L3 LINE CR1 919 1057 -520 21 71 0 0 chr10 9687237 9687279 -135902009 + AT_rich Low_complexity Low_complexity 1 42 0 216 67 0 0 chr10 9687570 9687600 -135901688 + (A)n Simple_repeat Simple_repeat 1 30 0 2261 99 0 0 chr10 9687605 9687908 -135901380 + AluSc SINE Alu 1 303 -6 1094 201 68 95 chr10 9688476 9688909 -135900379 + MLT2C2 LTR ERVL 5 425 -39 240 59 0 0 chr10 9688909 9688943 -135900345 + (CA)n Simple_repeat Simple_repeat 1 34 0 1094 201 68 95 chr10 9688943 9688982 -135900306 + MLT2C2 LTR ERVL 425 464 0 1481 125 37 0 chr10 9689548 9689803 -135899485 + AluSx SINE Alu 60 322 0 375 315 108 47 chr10 9691619 9691832 -135897456 + MLT1J LTR MaLR 1 226 -285 3177 272 41 14 chr10 9692010 9693524 -135895764 - L1MEc LINE L1 -2779 3647 2125 616 242 55 16 chr10 9693570 9693752 -135895536 - MER58A DNA MER1_type 0 224 36 247 275 71 71 chr10 9693824 9694035 -135895253 - L1MEc LINE L1 -4738 1688 1478 233 273 30 0 chr10 9694037 9694103 -135895185 + CT-rich Low_complexity Low_complexity 4 71 0 252 300 66 39 chr10 9694103 9694360 -135894928 - L1MEc LINE L1 -4920 2202 1939 758 229 45 14 chr10 9694590 9694813 -135894475 - L1MEc LINE L1 -6168 255 26 247 282 15 38 chr10 9694933 9695064 -135894224 - HAL1 LINE L1 -1352 1155 1028 411 328 53 65 chr10 9695309 9695800 -135893488 - HAL1 LINE L1 -1988 519 35 837 260 32 65 chr10 9696306 9696565 -135892723 - L1ME1 LINE L1 -134 6032 5786 1948 155 57 28 chr10 9696565 9696919 -135892369 + THE1B LTR MaLR 1 364 0 837 260 32 65 chr10 9696919 9697062 -135892226 - L1ME1 LINE L1 -380 5786 5640 189 0 0 0 chr10 9697086 9697107 -135892181 + (T)n Simple_repeat Simple_repeat 1 21 0 658 301 0 19 chr10 9697174 9697387 -135891901 - MER58A DNA MER1_type -8 216 8 328 333 39 8 chr10 9697390 9697519 -135891769 - Zaphod DNA AcHobo -3445 586 454 288 217 0 0 chr10 9697567 9697636 -135891652 + G-rich Low_complexity Low_complexity 1 69 0 1617 309 13 20 chr10 9697764 9698318 -135890970 - Zaphod DNA AcHobo -3480 551 2 280 355 45 27 chr10 9698323 9698543 -135890745 + L2 LINE L2 2684 2907 -407 22 0 0 0 chr10 9699784 9699806 -135889482 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr10 9700325 9700346 -135888942 + AT_rich Low_complexity Low_complexity 1 21 0 4272 174 66 57 chr10 9700371 9701433 -135887855 + MER11C LTR ERVK 1 1071 0 200 411 9 9 chr10 9701439 9701546 -135887742 + L2 LINE L2 3136 3242 -30 269 294 39 106 chr10 9701570 9701688 -135887600 - MIR SINE MIR -28 234 131 1995 132 20 0 chr10 9701688 9701984 -135887304 + AluSx SINE Alu 1 302 -10 269 294 39 106 chr10 9701984 9702045 -135887243 - MIR SINE MIR -131 131 67 27 0 0 0 chr10 9702302 9702329 -135886959 + AT_rich Low_complexity Low_complexity 1 27 0 188 67 33 0 chr10 9703463 9703493 -135885795 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 811 286 83 35 chr10 9703963 9704441 -135884847 - L1ME1 LINE L1 0 6166 5629 25 31 0 0 chr10 9704729 9704761 -135884527 + AT_rich Low_complexity Low_complexity 1 32 0 291 282 28 0 chr10 9705132 9705203 -135884085 - MIR3 SINE MIR -6 202 130 22 35 0 0 chr10 9705598 9705627 -135883661 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr10 9705931 9705952 -135883336 + AT_rich Low_complexity Low_complexity 1 21 0 344 289 21 72 chr10 9706770 9706964 -135882324 - L1ME3A LINE L1 -18 6152 5969 2019 136 0 17 chr10 9706969 9707271 -135882017 + AluSx SINE Alu 7 303 -9 927 305 103 25 chr10 9707358 9708351 -135880937 - L1ME3A LINE L1 -202 5960 4896 360 207 0 0 chr10 9708655 9708713 -135880575 - AluJ/FRAM SINE Alu -13 289 232 843 144 8 0 chr10 9708721 9708846 -135880442 - AluJb SINE Alu -186 126 1 567 308 87 61 chr10 9708848 9709800 -135879488 - L1ME3A LINE L1 -1587 4559 3566 1398 283 32 20 chr10 9709800 9710299 -135878989 + MLT1D LTR MaLR 1 505 0 567 308 87 61 chr10 9710299 9710592 -135878696 - L1ME3A LINE L1 -2580 3566 3282 290 325 9 0 chr10 9710944 9711058 -135878230 + L1M4 LINE L1 4052 4166 -1980 25 83 0 0 chr10 9711184 9711244 -135878044 + AT_rich Low_complexity Low_complexity 1 60 0 542 324 110 39 chr10 9711258 9711280 -135878008 + L1M4 LINE L1 4390 4409 -1737 1749 189 9 3 chr10 9711280 9711619 -135877669 + L1MC1 LINE L1 5980 6320 -13 542 324 110 39 chr10 9711619 9712189 -135877099 + L1M4 LINE L1 4409 5024 -1122 2455 71 0 7 chr10 9712224 9712533 -135876755 + AluY SINE Alu 1 307 -4 417 169 331 0 chr10 9712549 9712685 -135876603 + L1MB7 LINE L1 2334 2514 -3632 4600 209 33 38 chr10 9712703 9714884 -135874404 + L1MB7 LINE L1 4005 6165 -19 363 338 29 7 chr10 9715280 9715419 -135873869 - MIR SINE MIR -114 148 7 25 0 0 0 chr10 9716265 9716290 -135872998 + AT_rich Low_complexity Low_complexity 1 25 0 208 200 22 0 chr10 9717359 9717404 -135871884 + (TAA)n Simple_repeat Simple_repeat 1 46 0 369 350 54 8 chr10 9719564 9719804 -135869484 + MLT1L LTR MaLR 357 607 -8 2576 164 9 2 chr10 9719861 9720301 -135868987 + L1MC1 LINE L1 5356 5798 -535 312 87 0 0 chr10 9720486 9720532 -135868756 + L1MC1 LINE L1 5816 5861 -483 2203 173 30 49 chr10 9720588 9721061 -135868227 + L1MC1 LINE L1 5870 6333 0 1375 175 110 7 chr10 9721071 9721379 -135867909 - MER2 DNA MER2_type -4 340 1 1131 190 26 8 chr10 9721379 9721638 -135867650 + L1MB2 LINE L1 5903 6169 -2 254 215 15 0 chr10 9721639 9721704 -135867584 + (TA)n Simple_repeat Simple_repeat 1 66 0 761 179 8 0 chr10 9721798 9721932 -135867356 - AluSq/x SINE Alu -167 146 12 275 201 160 104 chr10 9721933 9722077 -135867211 + LTR16C LTR ERVL 332 483 -8 1617 191 133 39 chr10 9722996 9723166 -135866122 - MLT1D LTR MaLR -2 503 350 2697 10 0 0 chr10 9723166 9723465 -135865823 - AluYa5 SINE Alu -12 299 1 1617 191 133 39 chr10 9723465 9723754 -135865534 - MLT1D LTR MaLR -155 350 1 292 274 24 0 chr10 9723803 9723887 -135865401 - LTR33 LTR ERVL -10 511 426 2259 115 0 0 chr10 9725622 9725926 -135863362 + AluSx SINE Alu 2 305 -7 655 304 70 8 chr10 9726321 9726564 -135862724 - MLT1J LTR MaLR -210 301 44 8039 181 51 18 chr10 9727079 9727623 -135861665 + Tigger1 DNA MER2_type 1 526 -1892 1579 125 13 0 chr10 9727623 9727855 -135861433 + AluSg/x SINE Alu 67 301 -11 8039 181 51 18 chr10 9727855 9728992 -135860296 + Tigger1 DNA MER2_type 526 1737 -681 1876 72 4 0 chr10 9728992 9729229 -135860059 + L1P4 LINE L1 5443 5680 -488 8540 38 0 0 chr10 9729384 9731173 -135858115 - L1PA4 LINE L1 -1 6154 4351 3896 32 0 0 chr10 9731173 9731637 -135857651 + L1PA4 LINE L1 3884 4347 -1799 28 29 0 0 chr10 9731792 9731827 -135857461 + AT_rich Low_complexity Low_complexity 1 35 0 243 195 52 0 chr10 9731901 9731978 -135857310 + L1MD3 LINE L1 1478 1558 -5301 * 839 311 73 38 chr10 9731965 9732804 -135856484 + L1MD3 LINE L1 2171 3038 -4100 * 1644 74 0 0 chr10 9732803 9733018 -135856270 + L1P LINE L1 4745 4959 -1187 504 249 101 0 chr10 9733034 9733223 -135856065 + L1MD3 LINE L1 5473 5680 -1277 692 65 65 9 chr10 9733440 9733547 -135855741 + L1PA14 LINE L1 6044 6156 -5 261 212 15 0 chr10 9733560 9733626 -135855662 - Tigger1 DNA MER2_type -2351 67 1 1971 257 50 14 chr10 9733642 9734289 -135854999 + L1MD3 LINE L1 6107 6776 -2030 207 114 0 0 chr10 9734321 9734356 -135854932 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 476 262 151 7 chr10 9734373 9734652 -135854636 + L1MEc LINE L1 1914 2232 -4164 591 274 124 17 chr10 9734671 9734912 -135854376 + L1M4b LINE L1 18 284 -6575 315 277 11 119 chr10 9735036 9735296 -135853992 + L1M4b LINE L1 994 1225 -5634 1499 259 74 45 chr10 9735548 9736118 -135853170 + L1M4b LINE L1 2512 3064 -3893 1967 139 0 32 chr10 9736118 9736427 -135852861 + AluSx SINE Alu 1 299 -13 1499 259 74 45 chr10 9736427 9737076 -135852212 + L1M4b LINE L1 3064 3743 -3214 2090 116 0 0 chr10 9737077 9737354 -135851934 + AluSx SINE Alu 1 277 -35 820 331 51 31 chr10 9737480 9737933 -135851355 - LTR16B LTR ERVL 0 464 3 478 287 51 15 chr10 9737960 9738155 -135851133 - L1MEc LINE L1 -3568 2647 2446 2502 296 70 55 chr10 9738193 9739138 -135850150 - L1MEc LINE L1 -3976 2420 1491 192 77 0 0 chr10 9739138 9739164 -135850124 + (TG)n Simple_repeat Simple_repeat 2 27 0 2502 296 70 55 chr10 9739164 9740589 -135848699 - L1MEc LINE L1 -4905 1491 14 269 241 12 24 chr10 9740567 9740650 -135848638 + L1MC/D LINE L1 5705 5786 -2022 * 212 208 19 0 chr10 9740812 9740865 -135848423 + (TA)n Simple_repeat Simple_repeat 1 54 0 24 53 0 0 chr10 9742749 9742787 -135846501 + AT_rich Low_complexity Low_complexity 1 38 0 937 195 0 0 chr10 9743765 9743919 -135845369 + AluJb SINE Alu 133 286 -26 191 363 96 19 chr10 9744456 9744613 -135844675 + MIR3 SINE MIR 33 201 -7 279 71 0 0 chr10 9744852 9744894 -135844394 + (TG)n Simple_repeat Simple_repeat 2 43 0 21 82 0 0 chr10 9745156 9745205 -135844083 + AT_rich Low_complexity Low_complexity 1 49 0 1510 188 91 0 chr10 9745905 9746224 -135843064 + MER7A DNA MER2_type 1 346 0 680 303 90 34 chr10 9746352 9746619 -135842669 + LTR16C LTR ERVL 67 348 -143 29 0 0 0 chr10 9746619 9746648 -135842640 + AT_rich Low_complexity Low_complexity 1 29 0 1455 174 37 58 chr10 9746657 9746951 -135842337 - AluJo SINE Alu -24 288 1 2125 117 3 0 chr10 9746962 9747252 -135842036 - AluSp SINE Alu -11 302 12 250 218 148 92 chr10 9747253 9747395 -135841893 + LTR16C LTR ERVL 332 481 -10 911 233 110 0 chr10 9747839 9748131 -135841157 - MER33 DNA MER1_type 0 324 1 293 250 11 0 chr10 9748566 9748658 -135840630 + (CATATA)n Simple_repeat Simple_repeat 2 94 0 225 211 0 0 chr10 9748812 9748864 -135840424 + (TA)n Simple_repeat Simple_repeat 2 53 0 236 281 49 0 chr10 9748874 9748956 -135840332 - L1MC4 LINE L1 -1343 6699 6614 219 298 0 0 chr10 9748973 9749057 -135840231 + (TA)n Simple_repeat Simple_repeat 1 84 0 274 388 39 0 chr10 9749118 9749221 -135840067 - MIR SINE MIR -83 125 19 189 0 0 0 chr10 9749535 9749556 -135839732 + (CA)n Simple_repeat Simple_repeat 1 21 0 288 0 0 0 chr10 9750266 9750298 -135838990 + (GA)n Simple_repeat Simple_repeat 1 32 0 2165 98 0 7 chr10 9750920 9751229 -135838059 + AluSg SINE Alu 1 310 0 2483 80 0 3 chr10 9751708 9752046 -135837242 - L1PA13 LINE L1 -250 5913 5577 1664 83 0 0 chr10 9752046 9752272 -135837016 + L1PA13 LINE L1 5920 6147 -16 361 19 57 0 chr10 9753378 9753431 -135835857 + (TCTA)n Simple_repeat Simple_repeat 3 58 0 2175 216 31 72 chr10 9754493 9755131 -135834157 - LTR9 LTR ERV1 0 612 1 2605 157 71 39 chr10 9755534 9756068 -135833220 - MER39 LTR ERV1 -2 705 155 2078 117 7 0 chr10 9756857 9757171 -135832117 + AluSx SINE Alu 1 312 0 437 224 93 100 chr10 9758839 9759048 -135830240 - MIR SINE MIR -9 253 42 612 101 0 0 chr10 9759566 9759655 -135829633 + (GGAA)n Simple_repeat Simple_repeat 2 90 0 227 657 0 12 chr10 9759655 9759824 -135829464 + G-rich Low_complexity Low_complexity 3 169 0 472 155 29 0 chr10 9759824 9759927 -135829361 + GA-rich Low_complexity Low_complexity 1 106 0 256 116 0 23 chr10 9759934 9759977 -135829311 + (GAAA)n Simple_repeat Simple_repeat 1 42 0 1482 183 27 83 chr10 9760925 9761033 -135828255 + MLT1B LTR MaLR 1 114 -276 196 29 29 29 chr10 9761033 9761067 -135828221 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 2091 108 0 11 chr10 9761069 9761355 -135827933 - AluSx SINE Alu -29 283 1 1482 183 27 83 chr10 9761355 9761652 -135827636 + MLT1B LTR MaLR 115 386 -4 384 209 216 20 chr10 9762135 9762288 -135827000 - LTR41 LTR ERVL -590 183 1 2905 107 5 2 chr10 9762797 9763227 -135826061 - L1PB2 LINE L1 -2 6149 5719 2827 7 0 0 chr10 9763564 9763870 -135825418 - AluYb8 SINE Alu -12 306 1 44384 37 1 1 chr10 9764012 9770163 -135819125 + L1PA3 LINE L1 7 6152 -3 207 69 0 0 chr10 9770217 9770246 -135819042 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 1937 121 37 4 chr10 9771739 9772041 -135817247 - AluY SINE Alu 0 313 3 205 283 121 50 chr10 9772500 9772599 -135816689 - L2 LINE L2 0 3313 3208 790 235 25 126 chr10 9772730 9773135 -135816153 - MLT1A1 LTR MaLR 0 365 2 310 255 83 45 chr10 9773732 9773889 -135815399 + MIR SINE MIR 95 257 -5 4823 160 14 6 chr10 9773926 9774805 -135814483 + L1PB4 LINE L1 5268 6153 -3 371 259 0 82 chr10 9774942 9775089 -135814199 - L2 LINE L2 0 3313 3179 184 91 45 0 chr10 9775276 9775320 -135813968 + A-rich Low_complexity Low_complexity 2 47 0 890 188 19 0 chr10 9775350 9775510 -135813778 + MER5A DNA MER1_type 3 165 -24 1950 140 42 50 chr10 9775683 9776061 -135813227 - THE1C LTR MaLR 0 375 1 1425 240 31 11 chr10 9776258 9776616 -135812672 + MLT1A1 LTR MaLR 1 365 0 243 0 0 0 chr10 9776684 9776711 -135812577 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 591 256 59 102 chr10 9776861 9777115 -135812173 - MLT1G LTR MaLR -334 256 14 331 318 46 59 chr10 9777158 9777397 -135811891 - MLT1G-int LTR MaLR -22 1349 1114 291 303 30 20 chr10 9778177 9778276 -135811012 - MLT1G-int LTR MaLR -879 492 393 565 138 121 0 chr10 9778707 9778823 -135810465 - AluJb SINE Alu 0 312 183 1580 166 0 0 chr10 9778823 9779070 -135810218 - AluSx SINE Alu -65 247 1 375 312 80 61 chr10 9779786 9780171 -135809117 + L2 LINE L2 2616 3004 -268 715 153 0 0 chr10 9780184 9780302 -135808986 + AluJb SINE Alu 190 307 -5 1089 219 32 19 chr10 9780307 9780746 -135808542 + L1M3 LINE L1 4959 5443 -737 * 3494 183 18 37 chr10 9780733 9781521 -135807767 - L1MB1 LINE L1 -146 6043 5271 479 315 82 7 chr10 9781767 9781913 -135807375 + MER91A DNA MER1_type 30 186 -10 1267 197 15 19 chr10 9782011 9782280 -135807008 - MER65A LTR ERV1 0 445 178 462 221 13 6 chr10 9782282 9782440 -135806848 + (TA)n Simple_repeat Simple_repeat 1 159 0 719 118 146 21 chr10 9782451 9782595 -135806693 - MER65B LTR ERV1 -369 162 1 4968 248 87 43 chr10 9782595 9784300 -135804988 - MER65B-int LTR ERV1 0 4871 3092 5832 74 4 4 chr10 9784306 9785075 -135804213 - L1PA8 LINE L1 -2 6170 5402 4199 82 11 0 chr10 9785067 9785690 -135803598 + L1P LINE L1 4798 5424 -730 * 1331 216 113 94 chr10 9785698 9787264 -135802024 - MER65A-int LTR ERV1 -1475 4856 3242 2069 107 4 0 chr10 9787264 9787568 -135801720 - AluSc SINE Alu 0 306 2 1331 216 113 94 chr10 9787568 9787664 -135801624 - MER65A-int LTR ERV1 -3089 3242 3149 385 225 62 73 chr10 9787660 9787838 -135801450 - MER65A-int LTR ERV1 -6399 1721 1546 * 22 0 0 0 chr10 9787899 9787921 -135801367 + AT_rich Low_complexity Low_complexity 1 22 0 7797 205 66 57 chr10 9787949 9788668 -135800620 - MER65A-int LTR ERV1 -2377 2494 1783 333 0 0 0 chr10 9788668 9788705 -135800583 + (CA)n Simple_repeat Simple_repeat 2 38 0 7797 205 66 57 chr10 9788705 9790403 -135798885 - MER65A-int LTR ERV1 -3088 1783 54 1986 212 28 21 chr10 9790463 9790725 -135798563 - MER65A LTR ERV1 -8 437 169 357 62 0 0 chr10 9790725 9790773 -135798515 + (TG)n Simple_repeat Simple_repeat 2 49 0 1986 212 28 21 chr10 9790773 9790944 -135798344 - MER65A LTR ERV1 -276 169 1 21 36 0 0 chr10 9793247 9793275 -135796013 + AT_rich Low_complexity Low_complexity 1 28 0 1774 176 36 6 chr10 9794059 9794394 -135794894 - L1MC1 LINE L1 -6 6327 5983 390 271 43 7 chr10 9794628 9794768 -135794520 + L1MEc LINE L1 213 357 -6206 * 1607 283 90 41 chr10 9794766 9796031 -135793257 + L1MEc LINE L1 1119 2665 -3717 2283 96 0 31 chr10 9796031 9796354 -135792934 + AluSq SINE Alu 1 313 0 1607 283 90 41 chr10 9796354 9797133 -135792155 + L1MEc LINE L1 2665 3404 -2978 2257 70 0 3 chr10 9797141 9797427 -135791861 + AluY SINE Alu 1 285 -26 504 77 0 0 chr10 9797429 9797507 -135791781 + (ACATG)n Simple_repeat Simple_repeat 1 78 0 402 269 154 10 chr10 9797507 9797715 -135791573 + L1MEc LINE L1 3347 3584 -2798 730 267 82 41 chr10 9797777 9798189 -135791099 + L1M4 LINE L1 4518 4946 -1200 256 341 14 0 chr10 9798351 9798489 -135790799 + (TCTA)n Simple_repeat Simple_repeat 3 142 0 2368 147 20 0 chr10 9798489 9798884 -135790404 - MER57A LTR ERV1 0 403 1 1174 123 9 66 chr10 9798999 9799210 -135790078 - AluSg/x SINE Alu -2 310 112 25 0 0 0 chr10 9799333 9799358 -135789930 + AT_rich Low_complexity Low_complexity 1 25 0 239 29 57 0 chr10 9799643 9799678 -135789610 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 1882 109 7 4 chr10 9799687 9799961 -135789327 - AluSx SINE Alu -37 275 1 2164 78 0 3 chr10 9800492 9800794 -135788494 - AluSg SINE Alu 0 301 1 180 0 0 0 chr10 9802160 9802180 -135787108 + (TA)n Simple_repeat Simple_repeat 2 21 0 414 328 126 8 chr10 9802369 9802631 -135786657 + L1MEc LINE L1 4305 4597 -1785 305 267 97 48 chr10 9802892 9803057 -135786231 + L1MEc LINE L1 4728 4900 -1482 228 240 0 0 chr10 9803140 9803190 -135786098 + L1MEc LINE L1 5033 5082 -1300 309 317 94 15 chr10 9803215 9803556 -135785732 + L1MEc LINE L1 5139 5506 -876 30 45 0 0 chr10 9803574 9803618 -135785670 + AT_rich Low_complexity Low_complexity 1 44 0 434 332 85 5 chr10 9804454 9804677 -135784611 - L2 LINE L2 -637 2677 2437 567 291 12 0 chr10 9804777 9804942 -135784346 + MIR SINE MIR 84 250 -12 345 279 66 22 chr10 9805348 9805484 -135783804 + MIR SINE MIR 118 259 -3 539 309 22 26 chr10 9807836 9808108 -135781180 + L1ME LINE L1 244 514 -5556 * 1032 306 82 48 chr10 9808098 9809442 -135779846 - L1M4 LINE L1 -1150 4996 3607 215 190 20 20 chr10 9809574 9809674 -135779614 + (TA)n Simple_repeat Simple_repeat 1 100 0 1727 202 11 22 chr10 9809710 9810077 -135779211 - MLT2D LTR ERVL -51 363 1 5209 142 33 5 chr10 9810208 9811087 -135778201 - L1PA16 LINE L1 -9 6157 5254 1885 224 37 35 chr10 9811102 9811641 -135777647 - L1 LINE L1 -1550 4596 4057 * 5044 223 24 9 chr10 9811628 9812889 -135776399 + L1 LINE L1 2975 4253 -1893 555 207 17 0 chr10 9812876 9812992 -135776296 + L1P LINE L1 3949 4066 -2080 * 329 314 111 49 chr10 9813057 9813633 -135775655 - HAL1b LINE L1 -505 843 232 26 30 0 0 chr10 9814649 9814682 -135774606 + AT_rich Low_complexity Low_complexity 1 33 0 303 373 8 15 chr10 9814842 9814901 -135774387 - L1MEc LINE L1 -4270 2126 2068 180 111 0 0 chr10 9814901 9814928 -135774360 + (TG)n Simple_repeat Simple_repeat 2 28 0 303 373 8 15 chr10 9814928 9815002 -135774286 - L1MEc LINE L1 -4328 2068 1994 809 289 42 42 chr10 9815121 9815650 -135773638 - L1MEc LINE L1 -4438 1958 1430 456 351 46 28 chr10 9816187 9816512 -135772776 - L1MEc LINE L1 -6030 366 36 2119 175 117 44 chr10 9816533 9816925 -135772363 - MLT2B1 LTR ERVL 0 520 85 1654 169 3 44 chr10 9816925 9817244 -135772044 + AluSx SINE Alu 7 312 0 2119 175 117 44 chr10 9817244 9817331 -135771957 - MLT2B1 LTR ERVL -435 85 6 187 353 9 86 chr10 9817432 9817548 -135771740 - L2 LINE L2 -19 3253 3147 188 273 286 0 chr10 9817783 9817860 -135771428 + MIR SINE MIR 158 256 -6 1413 228 26 37 chr10 9819286 9819663 -135769625 + MLT2D LTR ERVL 1 373 -41 1003 198 100 55 chr10 9819937 9820266 -135769022 - MER2 DNA MER2_type 0 344 1 217 280 0 21 chr10 9821519 9821612 -135767676 + A-rich Low_complexity Low_complexity 5 95 0 1548 205 99 0 chr10 9822716 9822943 -135766345 - MLT1A1 LTR MaLR 0 365 93 1437 220 42 14 chr10 9822943 9823298 -135765990 + MLT1A1 LTR MaLR 1 365 0 1548 205 99 0 chr10 9823298 9823402 -135765886 - MLT1A1 LTR MaLR -272 93 1 579 286 93 20 chr10 9824161 9824384 -135764904 + L1ME3A LINE L1 5541 5746 -424 1666 187 10 7 chr10 9824384 9824678 -135764610 + AluJo SINE Alu 1 295 -17 579 286 93 20 chr10 9824678 9824852 -135764436 + L1ME3A LINE L1 5746 5967 -203 1808 180 3 0 chr10 9826041 9826341 -135762947 + AluJb SINE Alu 2 302 -10 13621 26 0 2 chr10 9827048 9828752 -135760536 - L1PA3 LINE L1 -680 5475 3775 6099 13 1 0 chr10 9828752 9829446 -135759842 + L1PA3 LINE L1 5459 6155 0 205 89 78 22 chr10 9829895 9829985 -135759303 + (TATAA)n Simple_repeat Simple_repeat 5 99 0 415 325 32 4 chr10 9831639 9831888 -135757400 + L1MEc LINE L1 1229 1484 -4912 21 0 0 0 chr10 9831892 9831913 -135757375 + AT_rich Low_complexity Low_complexity 1 21 0 6973 64 4 2 chr10 9831913 9833598 -135755690 - L1PA7 LINE L1 -11 6143 4457 305 191 36 48 chr10 9833613 9833697 -135755591 - L1M4 LINE L1 -3951 2195 2113 938 117 0 0 chr10 9833707 9833835 -135755453 - AluSq/x SINE Alu -179 133 6 455 165 0 0 chr10 9833839 9833918 -135755370 - Tigger1 DNA MER2_type -503 1915 1837 6865 156 33 3 chr10 9833928 9834756 -135754532 - Tigger1 DNA MER2_type -1209 1209 333 213 39 0 0 chr10 9834756 9834782 -135754506 + (GA)n Simple_repeat Simple_repeat 1 26 0 6865 156 33 3 chr10 9834782 9835126 -135754162 - Tigger1 DNA MER2_type -2085 333 1 323 303 80 74 chr10 9835521 9835845 -135753443 - L1M4 LINE L1 -2329 3817 3492 1258 156 30 82 chr10 9835866 9836135 -135753153 - Tigger1 DNA MER2_type -1920 498 244 2112 238 57 52 chr10 9836223 9837918 -135751370 + L1ME1 LINE L1 114 2015 -4549 1703 225 20 6 chr10 9837920 9838275 -135751013 - MLT1A1 LTR MaLR -2 363 4 21 0 0 0 chr10 9838278 9838299 -135750989 + AT_rich Low_complexity Low_complexity 1 21 0 734 268 71 11 chr10 9838419 9838799 -135750489 + L1ME1 LINE L1 2191 2593 -3971 2053 100 7 0 chr10 9838801 9839072 -135750216 + AluSc SINE Alu 19 291 -18 349 281 123 79 chr10 9839098 9839553 -135749735 - HAL1 LINE L1 -1088 1419 945 1492 208 18 3 chr10 9839560 9839844 -135749444 - AluJb SINE Alu -24 288 1 2799 10 0 0 chr10 9840069 9840377 -135748911 + AluYa5 SINE Alu 1 308 -3 203 315 63 75 chr10 9841295 9841475 -135747813 - MIR SINE MIR -34 174 45 2185 164 55 26 chr10 9842982 9843402 -135745886 + Tigger2a DNA MER2_type 3 434 0 954 196 122 86 chr10 9843461 9843797 -135745491 + MLT1B LTR MaLR 43 390 0 2302 263 88 13 chr10 9843815 9845624 -135743664 + L1ME1 LINE L1 4640 6580 -4 189 74 0 0 chr10 9845630 9845657 -135743631 + (A)n Simple_repeat Simple_repeat 1 27 0 203 179 15 60 chr10 9845665 9845732 -135743556 + T-rich Low_complexity Low_complexity 3 66 0 932 339 102 28 chr10 9845759 9846050 -135743238 - L2 LINE L2 -54 3259 2991 1890 190 11 6 chr10 9846050 9846413 -135742875 + MLT1A1 LTR MaLR 1 365 0 932 339 102 28 chr10 9846413 9846876 -135742412 - L2 LINE L2 -322 2991 2425 2029 102 3 66 chr10 9847298 9847630 -135741658 + AluSp SINE Alu 1 311 -2 470 279 32 93 chr10 9849333 9849645 -135739643 + MLT1I LTR MaLR 99 391 -18 21 100 0 0 chr10 9850238 9850308 -135738980 + AT_rich Low_complexity Low_complexity 1 70 0 917 130 0 0 chr10 9850921 9851052 -135738236 - FLAM_C SINE Alu -2 131 1 327 336 37 30 chr10 9851291 9851425 -135737863 + MIR SINE MIR 17 151 -111 474 18 0 0 chr10 9851564 9851619 -135737669 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 236 302 0 0 chr10 9851688 9851774 -135737514 - L1MC4 LINE L1 -1342 6700 6615 294 106 0 0 chr10 9851774 9851821 -135737467 + (CATATA)n Simple_repeat Simple_repeat 2 48 0 21 0 0 0 chr10 9851938 9851959 -135737329 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr10 9852867 9852898 -135736390 + AT_rich Low_complexity Low_complexity 1 31 0 1641 262 134 65 chr10 9854481 9855525 -135733763 + L1MC4a LINE L1 5520 6660 -1148 2502 74 0 0 chr10 9855525 9855836 -135733452 + AluY SINE Alu 1 311 0 1641 262 134 65 chr10 9855836 9855999 -135733289 + L1MC4a LINE L1 6660 6810 -998 834 198 0 0 chr10 9856004 9856181 -135733107 + GA-rich Low_complexity Low_complexity 1 177 0 424 273 148 53 chr10 9856193 9856721 -135732567 + L1MC4 LINE L1 6926 7503 -539 255 355 82 24 chr10 9856904 9857145 -135732143 - L2 LINE L2 -228 3085 2767 21 57 0 0 chr10 9857604 9857639 -135731649 + AT_rich Low_complexity Low_complexity 1 35 0 315 263 13 0 chr10 9859881 9859957 -135729331 + MLT1A2 LTR MaLR 254 330 -44 4135 142 32 17 chr10 9859967 9861151 -135728137 - Tigger1 DNA MER2_type -1117 1301 5 4603 233 33 38 chr10 9861283 9862812 -135726476 + L1MB7 LINE L1 3689 5225 -959 2733 16 0 10 chr10 9862812 9863124 -135726164 + AluYb8 SINE Alu 1 309 -9 4603 233 33 38 chr10 9863124 9863773 -135725515 + L1MB7 LINE L1 5225 5846 -338 2263 138 28 0 chr10 9863773 9864127 -135725161 + THE1B LTR MaLR 1 364 0 4603 233 33 38 chr10 9864127 9864454 -135724834 + L1MB7 LINE L1 5846 6173 -11 513 180 0 40 chr10 9864610 9864710 -135724578 + MLT1B LTR MaLR 3 98 -292 256 89 89 0 chr10 9864701 9864746 -135724542 - MADE1 DNA Mariner -31 49 1 * 2871 165 20 60 chr10 9864746 9865229 -135724059 + LTR9 LTR ERV1 1 455 -157 444 19 0 0 chr10 9865229 9865282 -135724006 + (TC)n Simple_repeat Simple_repeat 1 53 0 2871 165 20 60 chr10 9865282 9865435 -135723853 + LTR9 LTR ERV1 455 612 0 26 98 0 0 chr10 9866116 9866198 -135723090 + AT_rich Low_complexity Low_complexity 1 82 0 288 324 85 28 chr10 9866333 9866509 -135722779 - MIR SINE MIR -72 190 5 1828 170 0 0 chr10 9866850 9867162 -135722126 - AluJo SINE Alu 0 312 1 1871 204 68 70 chr10 9867252 9867807 -135721481 - MLT2B3 LTR ERVL 0 554 1 2845 167 22 18 chr10 9867910 9868460 -135720828 + MER39B LTR ERV1 102 653 0 310 296 44 30 chr10 9868460 9868595 -135720693 + L1M4 LINE L1 4905 5041 -1105 331 199 24 65 chr10 9868648 9868781 -135720507 + L1M4 LINE L1 5171 5295 -851 295 311 180 19 chr10 9868804 9868965 -135720323 + MIR SINE MIR 51 237 -25 391 349 48 4 chr10 9869019 9869248 -135720040 + L3 LINE CR1 1215 1453 -124 240 354 0 0 chr10 9869452 9869531 -135719757 + L3 LINE CR1 1489 1567 -10 1982 184 26 16 chr10 9871922 9872307 -135716981 - LTR45B LTR ERV1 -97 392 4 299 323 23 15 chr10 9873809 9873939 -135715349 - MLT1F1-int LTR MaLR -549 822 692 728 266 30 69 chr10 9874188 9874332 -135714956 - MLT1F1-int LTR MaLR -760 611 463 2136 97 4 0 chr10 9874332 9874650 -135714638 + AluSq SINE Alu 5 323 0 728 266 30 69 chr10 9874650 9874839 -135714449 - MLT1F1-int LTR MaLR -908 463 290 276 274 145 16 chr10 9874865 9874989 -135714299 - MLT1F1-int LTR MaLR -1229 142 3 533 306 55 74 chr10 9875017 9875350 -135713938 - MLT1F1 LTR MaLR -60 531 186 1860 151 3 3 chr10 9875350 9875701 -135713587 - AluSc SINE Alu 0 309 1 533 306 55 74 chr10 9875701 9875884 -135713404 - MLT1F1 LTR MaLR -405 186 1 646 309 13 91 chr10 9875889 9876439 -135712849 - L1ME3A LINE L1 -213 5957 5451 478 300 100 91 chr10 9876441 9877061 -135712227 - L2 LINE L2 -5 3308 2670 1215 338 157 39 chr10 9877067 9878766 -135710522 - L2 LINE L2 -1093 2221 363 1929 143 0 7 chr10 9879167 9879461 -135709827 - AluSx SINE Alu -20 292 1 22 0 0 0 chr10 9881114 9881136 -135708152 + AT_rich Low_complexity Low_complexity 1 22 0 409 341 15 0 chr10 9881660 9881795 -135707493 + MIR SINE MIR 12 148 -114 324 346 59 0 chr10 9882152 9882288 -135707000 - MLT2E LTR ERVL -453 175 32 1523 178 117 38 chr10 9882667 9883060 -135706228 - MSTC LTR MaLR -4 424 1 471 316 83 9 chr10 9883371 9883589 -135705699 + MIR SINE MIR 2 235 -27 747 160 73 0 chr10 9885367 9885517 -135703771 - L1MB3 LINE L1 -38 6145 5985 420 262 5 2 chr10 9885515 9885625 -135703663 - L1ME3A LINE L1 -758 5422 5311 * 50 71 0 0 chr10 9885775 9885874 -135703414 + AT_rich Low_complexity Low_complexity 1 99 0 249 264 27 9 chr10 9885998 9886108 -135703180 + L1M4 LINE L1 2903 3014 -3132 394 271 128 53 chr10 9886271 9886592 -135702696 + L1MCc LINE L1 91 435 -5988 1510 291 67 30 chr10 9886791 9888049 -135701239 + L1MCc LINE L1 798 2107 -4834 264 100 0 0 chr10 9888078 9888118 -135701170 + (CA)n Simple_repeat Simple_repeat 2 41 0 369 348 62 25 chr10 9888131 9888484 -135700804 - L1MEc LINE L1 -5954 442 77 23 33 0 0 chr10 9888595 9888625 -135700663 + AT_rich Low_complexity Low_complexity 1 30 0 22 56 0 0 chr10 9889461 9889497 -135699791 + AT_rich Low_complexity Low_complexity 1 36 0 246 336 64 36 chr10 9890920 9891030 -135698258 + L2 LINE L2 3155 3267 -5 462 61 0 0 chr10 9891932 9891998 -135697290 + (CA)n Simple_repeat Simple_repeat 2 67 0 1680 269 108 29 chr10 9892044 9892998 -135696290 - L1ME3A LINE L1 -1333 4813 3785 1158 231 141 104 chr10 9892998 9893487 -135695801 + MER39 LTR ERV1 8 682 -25 922 265 94 52 chr10 9893497 9894366 -135694922 - L1ME3A LINE L1 -2351 3795 2869 232 217 36 12 chr10 9894612 9894695 -135694593 - L1MC4 LINE L1 -1341 6701 6617 220 307 40 27 chr10 9894775 9894850 -135694438 + MIR SINE MIR 153 228 -34 1618 187 13 0 chr10 9895805 9896110 -135693178 + AluSg SINE Alu 1 309 -1 1738 184 0 0 chr10 9897025 9897324 -135691964 - AluSx SINE Alu -13 299 1 2356 117 5 24 chr10 9897468 9897837 -135691451 + THE1B LTR MaLR 3 364 0 312 60 116 0 chr10 9898642 9898699 -135690589 - MLT2A2 LTR ERVL 0 453 400 391 209 26 0 chr10 9898709 9898985 -135690303 + (TA)n Simple_repeat Simple_repeat 1 283 0 332 217 27 0 chr10 9899007 9899274 -135690014 + (TA)n Simple_repeat Simple_repeat 1 274 0 459 0 0 0 chr10 9900653 9900704 -135688584 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 816 320 74 27 chr10 9901687 9902134 -135687154 + L1MCc LINE L1 19 486 -5937 743 296 155 33 chr10 9902362 9903007 -135686281 + L1MCc LINE L1 812 1535 -4888 801 213 100 12 chr10 9903039 9903288 -135686000 + L1M4 LINE L1 3382 3652 -2494 213 301 126 10 chr10 9903786 9903889 -135685399 + MIR SINE MIR 69 183 -79 1145 200 68 13 chr10 9903889 9904124 -135685164 + AluJb SINE Alu 1 248 -64 1913 87 12 0 chr10 9904124 9904378 -135684910 + AluSp SINE Alu 30 286 -27 288 70 0 0 chr10 9904378 9904421 -135684867 + (TTAAA)n Simple_repeat Simple_repeat 3 45 0 270 0 0 0 chr10 9904438 9904468 -135684820 + (CA)n Simple_repeat Simple_repeat 1 30 0 1886 171 47 0 chr10 9904473 9904813 -135684475 - Tigger3(Golem) DNA MER2_type -2 3027 2672 274 269 0 0 chr10 9904809 9904861 -135684427 - Tigger3(Golem) DNA MER2_type -2976 53 2 * 252 0 0 0 chr10 9904905 9904933 -135684355 + (TG)n Simple_repeat Simple_repeat 2 29 0 4476 194 27 17 chr10 9905049 9906026 -135683262 - L1MC2 LINE L1 -2 6760 5775 6874 223 78 25 chr10 9906030 9910201 -135679087 - L1MC2 LINE L1 -1661 4903 513 1771 156 43 18 chr10 9910205 9910533 -135678755 + MER44D DNA MER2_type 1 606 -3 1752 255 63 17 chr10 9910535 9911072 -135678216 - L1MC2 LINE L1 -5837 727 166 281 299 10 0 chr10 9911456 9911553 -135677735 + Charlie7 DNA MER1_type 2515 2612 0 357 319 43 7 chr10 9912190 9912328 -135676960 - MIR3 SINE MIR -18 190 48 1088 228 26 111 chr10 9912328 9912780 -135676508 + MLT2D LTR ERVL 1 414 0 245 228 54 0 chr10 9913235 9913327 -135675961 + (TA)n Simple_repeat Simple_repeat 2 98 0 22 35 0 0 chr10 9913519 9913548 -135675740 + AT_rich Low_complexity Low_complexity 1 29 0 1943 135 28 0 chr10 9913643 9913931 -135675357 - AluSx SINE Alu -16 296 1 21 36 0 0 chr10 9913936 9913964 -135675324 + AT_rich Low_complexity Low_complexity 1 28 0 1988 136 3 17 chr10 9914022 9914342 -135674946 + AluSx SINE Alu 1 312 0 2135 278 178 43 chr10 9915670 9916888 -135672400 - L2 LINE L2 -1137 2177 795 250 350 34 0 chr10 9916943 9917060 -135672228 + L2 LINE L2 3193 3313 0 23 0 0 0 chr10 9918238 9918261 -135671027 + AT_rich Low_complexity Low_complexity 1 23 0 241 234 117 32 chr10 9918264 9918358 -135670930 - HAL1b LINE L1 -866 482 381 193 161 0 36 chr10 9918864 9918920 -135670368 + CT-rich Low_complexity Low_complexity 3 56 0 30 27 0 0 chr10 9920910 9920947 -135668341 + AT_rich Low_complexity Low_complexity 1 37 0 2465 63 0 0 chr10 9920949 9921248 -135668040 + AluY SINE Alu 1 299 -12 287 263 61 53 chr10 9922736 9922850 -135666438 - L2 LINE L2 -189 3083 2969 2338 99 25 25 chr10 9924230 9924593 -135664695 + THE1B LTR MaLR 2 364 0 10680 121 6 13 chr10 9924593 9926184 -135663104 + THE1B-int LTR MaLR 1 1580 0 2492 100 5 24 chr10 9926184 9926555 -135662733 + THE1B LTR MaLR 1 364 0 229 282 203 42 chr10 9926844 9927085 -135662203 + L1MEd LINE L1 4 283 -5836 222 143 0 0 chr10 9927253 9927302 -135661986 + (CA)n Simple_repeat Simple_repeat 2 50 0 942 246 106 38 chr10 9927472 9927736 -135661552 + L1ME LINE L1 356 637 -6222 617 120 19 0 chr10 9927733 9927956 -135661332 + L1ME LINE L1 1346 1607 -5252 * 331 231 30 45 chr10 9927971 9928105 -135661183 + L1ME LINE L1 1778 1909 -4946 66 35 0 0 chr10 9928112 9928199 -135661089 + AT_rich Low_complexity Low_complexity 1 87 0 685 259 110 69 chr10 9928204 9928594 -135660694 + L1ME LINE L1 1946 2351 -4608 34 42 0 0 chr10 9928606 9928654 -135660634 + AT_rich Low_complexity Low_complexity 1 48 0 228 163 0 0 chr10 9928654 9928697 -135660591 + (CA)n Simple_repeat Simple_repeat 2 44 0 466 308 118 39 chr10 9929001 9929407 -135659881 + L1ME LINE L1 2565 3002 -4136 406 261 149 22 chr10 9929455 9929786 -135659502 + L1ME LINE L1 4006 4378 -2579 1820 174 3 0 chr10 9929801 9930105 -135659183 + AluSx SINE Alu 3 307 -5 796 165 80 58 chr10 9930113 9930301 -135658987 - L1PB4 LINE L1 -13 6143 5952 3254 223 22 39 chr10 9930302 9931264 -135658024 + L1ME LINE L1 4356 5301 -1656 21 36 0 0 chr10 9931280 9931308 -135657980 + AT_rich Low_complexity Low_complexity 1 28 0 537 305 106 25 chr10 9931726 9932132 -135657156 + L1ME LINE L1 6186 6624 -349 1291 278 122 33 chr10 9932175 9932718 -135656570 - MLT1G1 LTR MaLR -2 593 3 221 276 0 0 chr10 9932799 9932857 -135656431 + (TA)n Simple_repeat Simple_repeat 1 58 0 230 314 91 16 chr10 9935177 9935298 -135653990 + MLT2E LTR ERVL 74 203 -425 2115 106 17 0 chr10 9936032 9936324 -135652964 - AluSx SINE Alu -15 297 1 493 236 17 112 chr10 9937025 9937080 -135652208 + MLT1E LTR MaLR 71 130 -463 2285 103 3 0 chr10 9937080 9937391 -135651897 + AluSx SINE Alu 1 312 0 493 236 17 112 chr10 9937391 9937513 -135651775 + MLT1E LTR MaLR 130 231 -362 830 248 133 5 chr10 9937536 9937754 -135651534 + MLT1E LTR MaLR 348 593 0 233 286 62 54 chr10 9937818 9937930 -135651358 - LTR50 LTR ERVL -658 137 25 1464 328 54 33 chr10 9938270 9939236 -135650052 - HERVL LTR ERVL -394 5370 4385 664 269 83 16 chr10 9939222 9939475 -135649813 - HERVL LTR ERVL -1635 4019 3750 * 815 311 20 23 chr10 9939505 9939810 -135649478 - HERVL LTR ERVL -2068 3696 3393 1726 200 113 39 chr10 9939812 9940273 -135649015 + MLT1D LTR MaLR 9 503 -2 309 293 104 80 chr10 9940495 9940833 -135648455 - HERVL LTR ERVL -4105 1549 1204 24 32 0 0 chr10 9940864 9940895 -135648393 + AT_rich Low_complexity Low_complexity 1 31 0 188 349 16 0 chr10 9941706 9941769 -135647519 - L2 LINE L2 -694 2620 2557 22 35 0 0 chr10 9942205 9942234 -135647054 + AT_rich Low_complexity Low_complexity 1 29 0 181 256 98 73 chr10 9942665 9942747 -135646541 - MER5B DNA MER1_type -38 140 57 970 219 72 64 chr10 9944484 9944862 -135644426 - L1ME2 LINE L1 -20 6144 5758 1237 235 140 40 chr10 9944862 9945334 -135643954 - LTR40a LTR ERVL 0 519 1 970 219 72 64 chr10 9945334 9945366 -135643922 - L1ME2 LINE L1 -406 5758 5728 1539 223 61 158 chr10 9945513 9946986 -135642302 - L1ME2 LINE L1 -1898 4248 2919 754 293 96 77 chr10 9947026 9947572 -135641716 + L2 LINE L2 2748 3311 -2 368 285 101 67 chr10 9948009 9948276 -135641012 + HAL1 LINE L1 1356 1631 -876 290 299 106 18 chr10 9948298 9948572 -135640716 + L1ME3A LINE L1 3273 3570 -2576 203 170 21 0 chr10 9948572 9948619 -135640669 + GA-rich Low_complexity Low_complexity 1 48 0 554 278 114 31 chr10 9948721 9948954 -135640334 + L1ME3A LINE L1 4362 4574 -1572 2867 0 0 0 chr10 9948954 9949265 -135640023 + AluYa5 SINE Alu 1 311 0 554 278 114 31 chr10 9949265 9949477 -135639811 + L1ME3A LINE L1 4574 4844 -1302 389 302 84 36 chr10 9949596 9949960 -135639328 + L1ME3A LINE L1 5000 5391 -755 242 248 74 27 chr10 9950164 9950313 -135638975 - L1M4 LINE L1 -1613 4533 4378 * 504 291 147 16 chr10 9950295 9950676 -135638612 + L1ME3A LINE L1 5539 5962 -208 2266 93 0 0 chr10 9951501 9951820 -135637468 - AluY SINE Alu 0 311 1 2190 114 10 0 chr10 9951883 9952189 -135637099 - AluSx SINE Alu 0 312 4 23 0 0 0 chr10 9952646 9952669 -135636619 + AT_rich Low_complexity Low_complexity 1 23 0 281 352 31 8 chr10 9952688 9952816 -135636472 - L2 LINE L2 -358 2955 2825 30 0 0 0 chr10 9953526 9953556 -135635732 + AT_rich Low_complexity Low_complexity 1 30 0 1558 206 7 0 chr10 9953614 9953924 -135635364 - AluSx SINE Alu 0 312 1 3914 221 43 39 chr10 9954131 9954616 -135634672 + L1MC3 LINE L1 5123 5604 -542 1705 156 46 38 chr10 9954616 9954988 -135634300 + THE1C LTR MaLR 1 375 0 3914 221 43 39 chr10 9954988 9955655 -135633633 + L1MC3 LINE L1 5604 5250 -896 675 156 0 0 chr10 9955655 9955777 -135633511 + L1PA15 LINE L1 6041 6162 -3 3914 221 43 39 chr10 9955777 9955932 -135633356 + L1MC3 LINE L1 5249 5402 -744 2763 201 100 50 chr10 9955921 9956798 -135632490 + L1MC3 LINE L1 6840 7760 -25 * 505 544 5 10 chr10 9956796 9957002 -135632286 + L1PA5 LINE L1 5950 6154 0 * 52 17 0 0 chr10 9957008 9957067 -135632221 + AT_rich Low_complexity Low_complexity 1 59 0 350 270 51 67 chr10 9957108 9957511 -135631777 - L1MCa LINE L1 -4779 1942 1347 386 248 263 28 chr10 9957552 9957875 -135631413 - L1MCa LINE L1 -5077 1453 1055 2005 126 84 18 chr10 9957882 9958215 -135631073 - THE1C LTR MaLR 0 375 21 333 47 0 0 chr10 9958821 9958864 -135630424 + (TG)n Simple_repeat Simple_repeat 1 43 0 357 149 0 0 chr10 9958864 9958931 -135630357 - MER41A LTR ERV1 -93 461 395 279 0 0 0 chr10 9959989 9960020 -135629268 + (CA)n Simple_repeat Simple_repeat 2 32 0 221 214 36 0 chr10 9960220 9960276 -135629012 - L2 LINE L2 -9 3304 3247 250 327 38 69 chr10 9960710 9960869 -135628419 - L2 LINE L2 -3 3269 3116 213 401 30 0 chr10 9961165 9961297 -135627991 - L2 LINE L2 -676 2638 2503 1189 192 62 32 chr10 9961570 9961926 -135627362 + MSTC LTR MaLR 26 428 0 26 0 0 0 chr10 9962299 9962325 -135626963 + AT_rich Low_complexity Low_complexity 1 26 0 1922 142 0 23 chr10 9963111 9963414 -135625874 + AluSx SINE Alu 1 296 -16 254 85 0 21 chr10 9963417 9963464 -135625824 + (TAAA)n Simple_repeat Simple_repeat 4 49 0 2212 111 0 0 chr10 9964408 9964705 -135624583 + AluSc SINE Alu 2 298 -11 199 162 54 0 chr10 9964776 9964813 -135624475 + MIR SINE MIR 115 153 -109 1272 169 56 26 chr10 9965368 9965635 -135623653 + AluJo SINE Alu 21 295 -17 246 62 0 0 chr10 9965635 9965667 -135623621 + (GA)n Simple_repeat Simple_repeat 1 32 0 232 295 103 0 chr10 9966126 9966204 -135623084 - MIR SINE MIR -70 138 53 591 323 42 5 chr10 9966426 9966643 -135622645 - MIR SINE MIR -4 258 34 1112 297 7 51 chr10 9968073 9968487 -135620801 - L1MCa LINE L1 -6126 414 19 316 346 70 25 chr10 9968566 9968809 -135620479 + L1ME LINE L1 5493 5746 -375 21 0 0 0 chr10 9968830 9968851 -135620437 + AT_rich Low_complexity Low_complexity 1 21 0 37 69 0 0 chr10 9968929 9969001 -135620287 + AT_rich Low_complexity Low_complexity 1 72 0 305 345 9 0 chr10 9969132 9969242 -135620046 - HAL1 LINE L1 -812 1695 1585 296 143 18 0 chr10 9969379 9969435 -135619853 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 2511 128 5 0 chr10 9970950 9971332 -135617956 - L1PA15 LINE L1 -1 6164 5781 1399 198 43 3 chr10 9971338 9971666 -135617622 + L1MC1 LINE L1 5993 6333 0 23 0 0 0 chr10 9971787 9971810 -135617478 + AT_rich Low_complexity Low_complexity 1 23 0 186 43 0 0 chr10 9972420 9972443 -135616845 + (GA)n Simple_repeat Simple_repeat 2 24 0 309 358 49 7 chr10 9972941 9973226 -135616062 + L1M4 LINE L1 4757 5053 -1093 706 229 41 64 chr10 9973281 9973548 -135615740 - L1MEc LINE L1 -2099 4116 3856 8086 34 38 0 chr10 9973597 9974617 -135614671 + L1P LINE L1 2799 3857 -2289 2118 251 71 28 chr10 9974672 9975560 -135613728 - L1MEc LINE L1 -3919 2477 1552 206 326 11 21 chr10 9976286 9976381 -135612907 + GA-rich Low_complexity Low_complexity 1 94 0 1833 141 50 0 chr10 9976883 9977180 -135612108 + AluSx SINE Alu 1 312 0 34 0 0 0 chr10 9978365 9978399 -135610889 + AT_rich Low_complexity Low_complexity 1 34 0 1870 279 89 45 chr10 9978406 9979580 -135609708 - L1MEc LINE L1 -4839 1557 333 1523 205 70 63 chr10 9979594 9980082 -135609206 - MLT1D LTR MaLR -2 503 13 848 306 46 7 chr10 9980099 9980380 -135608908 - L1MEc LINE L1 -6077 319 28 263 239 62 31 chr10 9981396 9981574 -135607714 - L1M4 LINE L1 -395 5779 5594 383 279 88 42 chr10 9981587 9981836 -135607452 - L1M4 LINE L1 -683 5479 5219 493 295 78 34 chr10 9981889 9982302 -135606986 - L1ME2 LINE L1 -309 5855 5425 1213 286 39 30 chr10 9982320 9983010 -135606278 - L1ME2 LINE L1 -769 5377 4682 244 293 44 49 chr10 9983749 9983954 -135605334 + L1ME LINE L1 5526 5729 -392 27 73 0 0 chr10 9984134 9984189 -135605099 + AT_rich Low_complexity Low_complexity 1 55 0 1435 80 0 5 chr10 9984190 9984390 -135604898 - L1PA13 LINE L1 -7 6156 5958 3396 99 4 29 chr10 9984390 9984905 -135604383 + L1PA13 LINE L1 5440 5941 -222 547 277 7 0 chr10 9984965 9985106 -135604182 - L1ME LINE L1 -445 5719 5578 180 111 0 0 chr10 9985399 9985426 -135603862 + (TG)n Simple_repeat Simple_repeat 2 28 0 313 114 45 11 chr10 9986193 9986281 -135603007 + (TA)n Simple_repeat Simple_repeat 1 91 0 3875 245 52 11 chr10 9986356 9987830 -135601458 + L1M3a LINE L1 1 1540 -4495 390 312 87 74 chr10 9989432 9989973 -135599315 - L2 LINE L2 -836 2478 1931 536 278 106 8 chr10 9991880 9992135 -135597153 + L1M4 LINE L1 1803 2082 -5381 310 214 0 24 chr10 9992155 9992239 -135597049 + L1M4 LINE L1 2482 2563 -5004 463 289 17 30 chr10 9992547 9992782 -135596506 + L1ME2 LINE L1 2014 2245 -5310 31 26 0 0 chr10 9992782 9992820 -135596468 + AT_rich Low_complexity Low_complexity 1 38 0 496 289 69 47 chr10 9992820 9993523 -135595765 + L1ME2 LINE L1 2524 3293 -4453 302 273 52 47 chr10 9993694 9993926 -135595362 + L1ME2 LINE L1 3518 3710 -3855 991 262 124 2 chr10 9994031 9994489 -135594799 + L1ME2 LINE L1 3692 4205 -3360 227 250 34 0 chr10 9994493 9994581 -135594707 + L1ME2 LINE L1 4279 4369 -3196 2254 236 100 28 chr10 9994757 9995681 -135593607 + L1ME2 LINE L1 6572 7564 -19 31 44 0 0 chr10 9995932 9995977 -135593311 + AT_rich Low_complexity Low_complexity 1 45 0 360 64 0 0 chr10 9996382 9996429 -135592859 + (TG)n Simple_repeat Simple_repeat 2 48 0 221 376 20 10 chr10 9996449 9996550 -135592738 + MIR SINE MIR 151 252 -10 492 326 47 51 chr10 9997477 9998008 -135591280 - ERVL LTR ERVL -777 4353 3694 1579 351 37 47 chr10 9998067 9999204 -135590084 - ERVL LTR ERVL -1846 3918 2793 340 254 30 83 chr10 9999375 9999544 -135589744 + MER41B LTR ERV1 112 425 -210 948 311 79 70 chr10 9999758 10000197 -135589091 - ERVL LTR ERVL -2249 2747 2298 1798 175 7 7 chr10 10000197 10000506 -135588782 - AluSx SINE Alu -3 309 1 948 311 79 70 chr10 10000506 10000737 -135588551 - ERVL LTR ERVL -2698 2298 2071 1195 263 67 40 chr10 10000763 10001208 -135588080 - ERVL LTR ERVL -3615 1381 925 1311 176 113 60 chr10 10001371 10001741 -135587547 - MLT1B LTR MaLR 0 390 1 2033 128 7 0 chr10 10002256 10002552 -135586736 - AluSg SINE Alu -12 298 1 2172 193 29 2 chr10 10002779 10003188 -135586100 - MSTB LTR MaLR -2 424 5 390 333 45 35 chr10 10003282 10003570 -135585718 - LTR16B LTR ERVL -171 293 3 856 95 0 16 chr10 10004090 10004255 -135585033 - AluSg/x SINE Alu 0 351 189 218 276 143 78 chr10 10005129 10005346 -135583942 - MIR SINE MIR -12 250 20 25 65 0 0 chr10 10006124 10006170 -135583118 + AT_rich Low_complexity Low_complexity 1 46 0 288 345 0 9 chr10 10006602 10006712 -135582576 - MIR SINE MIR -123 139 31 288 53 0 0 chr10 10008885 10008923 -135580365 + (TG)n Simple_repeat Simple_repeat 1 38 0 1759 98 15 15 chr10 10009872 10010136 -135579152 + AluSg SINE Alu 39 302 -8 22 56 0 0 chr10 10010216 10010252 -135579036 + AT_rich Low_complexity Low_complexity 1 36 0 225 0 0 0 chr10 10010503 10010528 -135578760 + (TG)n Simple_repeat Simple_repeat 1 25 0 2383 57 0 17 chr10 10010668 10010968 -135578320 - AluY SINE Alu -16 295 1 192 282 64 51 chr10 10010989 10011067 -135578221 + L2 LINE L2 1876 1954 -1360 202 352 119 19 chr10 10011148 10011307 -135577981 + MIR SINE MIR 26 200 -62 465 277 95 84 chr10 10011335 10011714 -135577574 - MLT1I LTR MaLR -13 396 14 243 0 0 0 chr10 10012356 10012383 -135576905 + (CA)n Simple_repeat Simple_repeat 2 28 0 219 114 0 0 chr10 10012437 10012472 -135576816 + (TA)n Simple_repeat Simple_repeat 2 36 0 1305 266 113 10 chr10 10012489 10012580 -135576708 + L1MEc LINE L1 22 102 -6294 2232 102 0 0 chr10 10012580 10012874 -135576414 + AluSc SINE Alu 1 294 -15 1305 266 113 10 chr10 10012874 10013305 -135575983 + L1MEc LINE L1 102 598 -5798 2307 259 118 27 chr10 10013327 10014978 -135574310 + L1MEc LINE L1 714 1920 -4295 1522 176 7 33 chr10 10014978 10015279 -135574009 - AluJo SINE Alu -8 304 12 2307 259 118 27 chr10 10015279 10016353 -135572935 + L1MEc LINE L1 1920 2894 -3321 558 267 37 42 chr10 10016351 10016568 -135572720 + L1ME LINE L1 1853 2068 -4328 * 864 174 6 23 chr10 10016731 10016903 -135572385 - AluSc SINE Alu -140 169 1 324 284 90 76 chr10 10017004 10017215 -135572073 + L1MC4a LINE L1 5689 5902 -1906 196 323 54 11 chr10 10017430 10017523 -135571765 - L2 LINE L2 -1456 1858 1762 2157 88 7 27 chr10 10017880 10018176 -135571112 - AluSg SINE Alu -20 290 1 407 198 23 23 chr10 10019599 10019776 -135569512 + (CATATA)n Simple_repeat Simple_repeat 4 180 0 280 254 8 8 chr10 10019788 10019918 -135569370 + (CATATA)n Simple_repeat Simple_repeat 6 135 0 21 36 0 0 chr10 10020879 10020907 -135568381 + AT_rich Low_complexity Low_complexity 1 28 0 2034 168 65 23 chr10 10021008 10021126 -135568162 - Tigger2 DNA MER2_type 0 2718 2606 2245 100 0 7 chr10 10021126 10021427 -135567861 - AluSx SINE Alu -13 299 1 2034 168 65 23 chr10 10021427 10021742 -135567546 - Tigger2 DNA MER2_type -112 2606 2267 494 118 0 0 chr10 10021726 10021794 -135567494 - Tigger2 DNA MER2_type -2649 69 2 * 2126 125 0 3 chr10 10021902 10022215 -135567073 - AluSx SINE Alu 0 312 1 250 384 58 15 chr10 10022217 10022486 -135566802 - L2 LINE L2 -240 3032 2751 4221 226 46 12 chr10 10022670 10023833 -135565455 - L1 LINE L1 -2626 3520 2318 217 182 15 15 chr10 10023938 10024004 -135565284 + (TA)n Simple_repeat Simple_repeat 2 67 0 2441 264 97 47 chr10 10024036 10024254 -135565034 + L1ME LINE L1 3520 3726 -2489 1761 155 28 3 chr10 10024254 10024544 -135564744 + AluSx SINE Alu 5 301 -11 2441 264 97 47 chr10 10024544 10024609 -135564679 + L1ME LINE L1 3726 3786 -2429 327 25 0 0 chr10 10024609 10024649 -135564639 + (CA)n Simple_repeat Simple_repeat 2 41 0 2441 264 97 47 chr10 10024649 10025729 -135563559 + L1ME LINE L1 3786 4952 -1263 437 274 57 0 chr10 10025728 10025852 -135563436 + L1ME LINE L1 5698 5828 -405 * 433 294 119 59 chr10 10025880 10026268 -135563020 + LTR16A LTR ERVL 16 426 -24 240 315 11 56 chr10 10026480 10026569 -135562719 + L2 LINE L2 3187 3271 -1 812 280 42 17 chr10 10027266 10027502 -135561786 - MIR SINE MIR -10 252 11 1628 259 92 47 chr10 10027818 10029935 -135559353 - L1MD3 LINE L1 -14 7981 5693 207 269 19 0 chr10 10031059 10031111 -135558177 + MIR SINE MIR 160 212 -50 816 226 111 17 chr10 10031742 10031976 -135557312 - MLT2B2 LTR ERVL 0 515 260 688 173 0 8 chr10 10031986 10032119 -135557169 - L1PA15-16 LINE L1 -3895 2954 2823 630 112 9 9 chr10 10032121 10032228 -135557060 + L1PA15 LINE L1 6056 6162 -3 588 271 39 55 chr10 10032228 10032483 -135556805 - MLT2B2 LTR ERVL -264 251 1 2036 161 55 3 chr10 10032558 10032938 -135556350 - MER57A LTR ERV1 0 403 4 284 361 103 30 chr10 10033020 10033494 -135555794 + L2 LINE L2 2804 3312 -1 1544 231 115 0 chr10 10034439 10034838 -135554450 - MLT2B1 LTR ERVL -75 445 1 542 313 19 30 chr10 10035433 10035701 -135553587 + LTR16A LTR ERVL 88 352 -98 237 316 26 26 chr10 10035908 10036025 -135553263 - MIR3 SINE MIR -53 155 39 299 320 10 19 chr10 10036139 10036242 -135553046 + MER5A DNA MER1_type 64 165 -24 1305 188 65 60 chr10 10036291 10036674 -135552614 - MLT1B LTR MaLR -1 389 5 25 0 0 0 chr10 10037075 10037100 -135552188 + AT_rich Low_complexity Low_complexity 1 25 0 1988 147 10 0 chr10 10039668 10039961 -135549327 - AluSx SINE Alu -15 297 2 284 388 71 41 chr10 10040472 10040910 -135548378 - L2 LINE L2 -15 3257 2807 361 231 29 10 chr10 10041464 10041568 -135547720 + L1M4 LINE L1 5698 5803 -375 750 222 23 56 chr10 10041909 10042212 -135547076 - L1MEc LINE L1 -3871 3694 3398 733 274 4 34 chr10 10042219 10042453 -135546835 - L1MEc LINE L1 -6153 1593 1367 261 0 0 0 chr10 10045246 10045275 -135544013 + (CAAAAA)n Simple_repeat Simple_repeat 2 30 0 225 171 0 0 chr10 10046089 10046124 -135543164 - U2 snRNA snRNA -152 36 2 910 263 55 24 chr10 10047412 10047701 -135541587 - LTR16C LTR ERVL -8 483 186 263 250 0 0 chr10 10047913 10047969 -135541319 - MER2 DNA MER2_type 0 345 290 948 226 25 0 chr10 10048034 10048233 -135541055 - MER2 DNA MER2_type -140 205 2 261 337 94 54 chr10 10048841 10049322 -135539966 - ERVL LTR ERVL -1149 4615 4116 402 319 104 34 chr10 10049433 10049787 -135539501 - ERVL LTR ERVL -2125 3529 3151 472 329 67 69 chr10 10049875 10050337 -135538951 - ERVL LTR ERVL -1994 3002 2542 794 304 40 33 chr10 10050444 10050872 -135538416 - L1MC/D LINE L1 -2115 5693 5263 25 31 0 0 chr10 10050932 10050964 -135538324 + AT_rich Low_complexity Low_complexity 1 32 0 26 30 0 0 chr10 10051167 10051200 -135538088 + AT_rich Low_complexity Low_complexity 1 33 0 1548 189 25 0 chr10 10051289 10051564 -135537724 - AluJo SINE Alu -30 282 1 799 171 21 47 chr10 10051695 10051888 -135537400 - L1MB1 LINE L1 -226 5963 5776 1338 173 26 61 chr10 10051938 10052251 -135537037 + L1M3 LINE L1 5489 5790 -544 483 322 24 10 chr10 10052283 10052491 -135536797 + MER58C DNA MER1_type 5 215 0 775 291 25 30 chr10 10053008 10053483 -135535805 - MLT2F LTR ERVL -158 505 5 1371 311 23 33 chr10 10053808 10053989 -135535299 - ERVL LTR ERVL -348 5416 5235 2324 102 0 0 chr10 10053989 10054283 -135535005 + AluSg SINE Alu 1 294 -16 1371 311 23 33 chr10 10054283 10055000 -135534288 - ERVL LTR ERVL -529 5235 4456 203 0 0 36 chr10 10055638 10055666 -135533622 + (CA)n Simple_repeat Simple_repeat 2 28 0 186 133 0 0 chr10 10055770 10055800 -135533488 + (CATA)n Simple_repeat Simple_repeat 4 33 0 285 146 0 0 chr10 10055813 10055861 -135533427 + (TG)n Simple_repeat Simple_repeat 1 48 0 5510 134 7 18 chr10 10056510 10058113 -135531175 - L1PA15 LINE L1 -2 6163 4557 4557 224 13 5 chr10 10058125 10059176 -135530112 - L1PA15 LINE L1 -1944 4202 3143 3411 168 57 5 chr10 10059194 10059771 -135529517 + L1PA13 LINE L1 1 607 -6180 1718 175 55 37 chr10 10059771 10060096 -135529192 - MER1B DNA MER1_type -7 332 2 5990 225 62 2 chr10 10060097 10061321 -135527967 + L1PA13 LINE L1 608 1904 -4883 22 56 0 0 chr10 10062501 10062537 -135526751 + AT_rich Low_complexity Low_complexity 1 36 0 612 258 162 34 chr10 10062571 10062927 -135526361 + MLT1I LTR MaLR 1 450 0 2253 83 6 43 chr10 10063013 10063338 -135525950 - AluSp SINE Alu 0 313 1 25 51 0 0 chr10 10063364 10063403 -135525885 + AT_rich Low_complexity Low_complexity 1 39 0 209 295 163 12 chr10 10063462 10063628 -135525660 - MIR SINE MIR -1 261 71 209 346 145 11 chr10 10063688 10063867 -135525421 - MIR SINE MIR -13 249 47 27 29 0 0 chr10 10064380 10064414 -135524874 + AT_rich Low_complexity Low_complexity 1 34 0 3034 147 25 55 chr10 10065085 10065716 -135523572 - LTR9 LTR ERV1 0 612 1 3446 150 12 5 chr10 10065860 10066421 -135522867 + MER61E LTR ERV1 1 565 -4 802 295 62 37 chr10 10066670 10067104 -135522184 + L1MCc LINE L1 24 468 -5955 1417 279 89 33 chr10 10067410 10067571 -135521717 + L1MCc LINE L1 1945 2095 -5027 234 0 0 0 chr10 10067571 10067597 -135521691 + (CA)n Simple_repeat Simple_repeat 2 27 0 1417 279 89 33 chr10 10067597 10068028 -135521260 + L1MCc LINE L1 2095 2596 -4526 2130 119 3 3 chr10 10068028 10068321 -135520967 + AluSx SINE Alu 1 293 -19 1417 279 89 33 chr10 10068321 10068525 -135520763 + L1MCc LINE L1 2596 2787 -4335 340 261 18 73 chr10 10068522 10068687 -135520601 + L1ME1 LINE L1 6006 6161 -5 * 26 50 0 0 chr10 10069034 10069074 -135520214 + AT_rich Low_complexity Low_complexity 1 40 0 330 279 0 0 chr10 10069660 10069739 -135519549 + L2 LINE L2 3181 3259 -13 506 328 49 11 chr10 10070079 10070262 -135519026 + MIR SINE MIR 29 218 -44 2225 98 3 25 chr10 10070760 10071078 -135518210 - AluSp SINE Alu -2 311 1 345 262 128 43 chr10 10071516 10071680 -135517608 + MER3 DNA MER1_type 6 183 -26 7783 21 0 0 chr10 10071803 10072890 -135516398 + L1PA3 LINE L1 5066 6152 -3 240 331 37 37 chr10 10072980 10073143 -135516145 - L2 LINE L2 -2 3311 3149 2175 125 0 3 chr10 10073520 10073825 -135515463 + AluSx SINE Alu 1 304 -8 462 268 40 11 chr10 10073925 10074165 -135515123 - L1MB7 LINE L1 -11 6169 5915 25 31 0 0 chr10 10075460 10075492 -135513796 + AT_rich Low_complexity Low_complexity 1 32 0 1595 199 13 3 chr10 10075640 10075941 -135513347 + AluJo SINE Alu 1 304 -8 25 31 0 0 chr10 10075990 10076022 -135513266 + AT_rich Low_complexity Low_complexity 1 32 0 1899 182 9 0 chr10 10076178 10076519 -135512769 - MER7A DNA MER2_type -1 345 4 519 326 94 38 chr10 10076577 10076970 -135512318 + L2 LINE L2 1752 2166 -1148 1638 199 38 20 chr10 10077053 10077395 -135511893 + MLT1C LTR MaLR 90 437 -30 9352 155 22 8 chr10 10077395 10078989 -135510299 + Tigger1 DNA MER2_type 3 1619 -799 5539 79 11 35 chr10 10078989 10079429 -135509859 + L1PB1 LINE L1 5362 5776 -375 198 103 0 0 chr10 10079429 10079458 -135509830 + (CATA)n Simple_repeat Simple_repeat 2 30 0 5539 79 11 35 chr10 10079458 10079826 -135509462 + L1PB1 LINE L1 5776 6151 0 22 56 0 0 chr10 10079836 10079872 -135509416 + AT_rich Low_complexity Low_complexity 1 36 0 895 168 6 0 chr10 10079872 10080039 -135509249 + Tigger1 DNA MER2_type 1621 1788 -630 6075 24 0 2 chr10 10080039 10080960 -135508328 - L1PA4 LINE L1 -181 5974 5055 1367 30 18 0 chr10 10080960 10081121 -135508167 + L1PA4 LINE L1 5982 6152 -3 210 71 0 0 chr10 10081151 10081179 -135508109 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 2731 79 3 0 chr10 10081179 10081547 -135507741 + L1PB1 LINE L1 5783 6151 0 3428 159 42 10 chr10 10081577 10082198 -135507090 + Tigger1 DNA MER2_type 1778 2418 0 568 315 117 48 chr10 10082245 10082780 -135506508 + L2 LINE L2 2227 2723 -590 607 200 124 81 chr10 10082780 10082990 -135506298 + MER20 DNA MER1_type 1 219 0 568 315 117 48 chr10 10082990 10083308 -135505980 + L2 LINE L2 2723 3155 -158 2249 124 37 93 chr10 10083308 10083543 -135505745 + Tigger2a DNA MER2_type 1 199 -2509 2176 125 0 0 chr10 10083543 10083855 -135505433 - AluSx SINE Alu 0 312 1 2249 124 37 93 chr10 10083855 10084079 -135505209 + Tigger2a DNA MER2_type 199 434 0 568 315 117 48 chr10 10084079 10084192 -135505096 + L2 LINE L2 3155 3259 -54 405 0 0 0 chr10 10084193 10084238 -135505050 + (CA)n Simple_repeat Simple_repeat 2 46 0 180 97 0 0 chr10 10084256 10084287 -135505001 + (TGAA)n Simple_repeat Simple_repeat 3 33 0 2865 126 23 71 chr10 10084524 10085118 -135504170 + LTR10A LTR ERV1 1 612 -21 1060 342 105 14 chr10 10085123 10085816 -135503472 + L2 LINE L2 158 913 -2401 778 314 131 16 chr10 10085818 10086094 -135503194 + L2 LINE L2 2439 2770 -544 1454 209 59 14 chr10 10086094 10086452 -135502836 - MLT1A2 LTR MaLR 0 374 1 778 314 131 16 chr10 10086452 10086548 -135502740 + L2 LINE L2 2770 2854 -460 1277 216 49 93 chr10 10086588 10087273 -135502015 - LTR9 LTR ERV1 0 779 1 871 305 40 59 chr10 10087276 10087702 -135501586 + L2 LINE L2 2894 3311 -2 322 279 101 6 chr10 10088929 10089087 -135500201 - L1ME3A LINE L1 -208 5962 5790 388 301 13 13 chr10 10089110 10089243 -135500045 - MLT1H LTR MaLR -374 175 1 826 266 97 48 chr10 10089417 10089748 -135499540 - MLT1I LTR MaLR 0 409 63 397 320 132 50 chr10 10090825 10091228 -135498060 - MLT1H LTR MaLR -43 506 71 306 200 14 14 chr10 10091415 10091485 -135497803 + Tigger5 DNA MER2_type 2251 2320 -3 260 288 18 9 chr10 10091540 10091651 -135497637 - L1MEc LINE L1 -3820 2395 2284 466 304 53 23 chr10 10091774 10092037 -135497251 - L1MEc LINE L1 -4177 2219 1949 267 267 37 11 chr10 10092354 10092469 -135496819 - L1PA15-16 LINE L1 -966 1798 1424 241 226 0 0 chr10 10092514 10092567 -135496721 + CT-rich Low_complexity Low_complexity 3 55 0 247 310 66 45 chr10 10092619 10092861 -135496427 - L1MEc LINE L1 -4910 1295 1049 182 250 225 12 chr10 10093969 10094049 -135495239 + L2 LINE L2 3214 3310 -3 213 286 24 12 chr10 10094102 10094186 -135495102 - L3b LINE CR1 -92 1491 1407 390 252 52 37 chr10 10094838 10094973 -135494315 + L2 LINE L2 3159 3295 -18 21 0 0 0 chr10 10095069 10095090 -135494198 + AT_rich Low_complexity Low_complexity 1 21 0 5123 92 29 20 chr10 10095388 10096175 -135493113 - SVA Other Other 0 1386 593 861 283 39 25 chr10 10096380 10096690 -135492598 + Zaphod DNA AcHobo 1 362 -3669 2132 100 37 7 chr10 10096690 10096990 -135492298 + AluSx SINE Alu 2 310 -2 861 283 39 25 chr10 10096990 10097007 -135492281 + Zaphod DNA AcHobo 362 377 -3654 712 278 33 41 chr10 10097244 10097489 -135491799 + Zaphod DNA AcHobo 362 604 -3427 1282 226 79 40 chr10 10097612 10097888 -135491400 + Zaphod DNA AcHobo 3341 3605 -426 180 0 0 0 chr10 10097888 10097908 -135491380 + (TA)n Simple_repeat Simple_repeat 2 21 0 1780 137 34 17 chr10 10097908 10098200 -135491088 - AluSx SINE Alu -15 297 1 1282 226 79 40 chr10 10098200 10098529 -135490759 + Zaphod DNA AcHobo 3604 3971 -60 830 205 51 44 chr10 10098612 10098631 -135490657 - MLT2B1 LTR ERVL -40 480 463 261 0 0 0 chr10 10098631 10098660 -135490628 + (TG)n Simple_repeat Simple_repeat 2 30 0 830 205 51 44 chr10 10098660 10098867 -135490421 - MLT2B1 LTR ERVL -57 463 196 224 336 18 27 chr10 10099064 10099174 -135490114 - MER5B DNA MER1_type -20 158 50 248 299 15 0 chr10 10100032 10100099 -135489189 - L3 LINE CR1 -2 1575 1508 307 326 181 5 chr10 10100543 10100758 -135488530 - L3 LINE CR1 -81 1496 1244 225 65 0 0 chr10 10100781 10100812 -135488476 + (TG)n Simple_repeat Simple_repeat 2 32 0 602 190 6 134 chr10 10101241 10101420 -135487868 - L2 LINE L2 0 3313 3158 496 255 108 0 chr10 10101434 10101591 -135487697 - MER104 DNA MER2_type -4 176 3 217 335 76 40 chr10 10101813 10102037 -135487251 + L2 LINE L2 2498 2729 -585 302 300 55 36 chr10 10102481 10102591 -135486697 + MIR SINE MIR 32 143 -119 28 29 0 0 chr10 10102858 10102893 -135486395 + AT_rich Low_complexity Low_complexity 1 35 0 31 44 0 0 chr10 10103045 10103090 -135486198 + AT_rich Low_complexity Low_complexity 1 45 0 21 57 0 0 chr10 10103097 10103132 -135486156 + AT_rich Low_complexity Low_complexity 1 35 0 1720 178 7 0 chr10 10103705 10103992 -135485296 + AluSx SINE Alu 1 289 -23 1629 156 99 52 chr10 10104032 10104397 -135484891 + MLT1B LTR MaLR 1 382 -8 243 289 28 90 chr10 10104414 10104625 -135484663 - MLT1J LTR MaLR -75 436 239 188 268 197 14 chr10 10104874 10104945 -135484343 - L3 LINE CR1 -944 633 550 225 94 0 0 chr10 10105589 10105621 -135483667 + (TC)n Simple_repeat Simple_repeat 1 32 0 1493 214 20 3 chr10 10106165 10106464 -135482824 - MER2 DNA MER2_type 0 345 42 310 160 0 0 chr10 10106469 10106519 -135482769 - Tigger2a DNA MER2_type -384 50 1 405 325 87 28 chr10 10106785 10107235 -135482053 - L2 LINE L2 -193 3079 2554 3618 175 81 8 chr10 10107235 10108063 -135481225 - L1 LINE L1 -1238 4908 4021 279 347 49 62 chr10 10109767 10110136 -135479152 - L2 LINE L2 -452 2862 2499 416 310 116 31 chr10 10110644 10111066 -135478222 + L1M4 LINE L1 2947 3404 -2742 33 43 0 0 chr10 10111318 10111365 -135477923 + AT_rich Low_complexity Low_complexity 1 47 0 22 35 0 0 chr10 10111473 10111502 -135477786 + AT_rich Low_complexity Low_complexity 1 29 0 321 333 81 0 chr10 10112272 10112395 -135476893 + L1M4 LINE L1 3711 3843 -2303 314 304 55 40 chr10 10112399 10112600 -135476688 - LTR67 LTR ERVL -18 539 336 438 309 100 26 chr10 10113268 10113769 -135475519 + L1MEc LINE L1 1247 1784 -4612 1024 301 90 22 chr10 10113966 10115409 -135473879 + L1MEc LINE L1 2023 3529 -2686 949 238 60 75 chr10 10115474 10115927 -135473361 - MLT2B3 LTR ERVL -1 553 108 226 204 93 0 chr10 10115907 10115961 -135473327 - MLT2B2 LTR ERVL -334 181 123 * 372 220 40 10 chr10 10115966 10116066 -135473222 - MLT2B3 LTR ERVL -377 177 75 346 243 0 0 chr10 10116136 10116210 -135473078 - MLT2B3 LTR ERVL -479 75 2 323 279 119 27 chr10 10116232 10116526 -135472762 + L1MEc LINE L1 3740 4060 -2155 639 286 154 39 chr10 10116726 10117552 -135471736 + L1MEc LINE L1 4349 5278 -937 2209 78 0 0 chr10 10117552 10117866 -135471422 + AluSx SINE Alu 1 314 0 639 286 154 39 chr10 10117866 10117887 -135471401 + L1MEc LINE L1 5278 5295 -920 2069 159 30 5 chr10 10117888 10118259 -135471029 - MER6 DNA MER2_type -1 864 225 1190 237 116 75 chr10 10118265 10118961 -135470327 + MER50 LTR ERV1 10 734 0 987 178 115 5 chr10 10118961 10119166 -135470122 - MER6 DNA MER2_type -637 228 1 324 64 0 0 chr10 10119276 10119323 -135469965 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 1569 251 52 24 chr10 10119795 10120257 -135469031 + MER74B LTR ERVL 71 545 -77 276 91 76 45 chr10 10120203 10120269 -135469019 - MER88 LTR ERVL -317 147 80 * 872 42 0 50 chr10 10120384 10120504 -135468784 - AluSg/x SINE Alu -19 291 178 883 142 0 22 chr10 10120587 10120770 -135468518 + (TCTA)n Simple_repeat Simple_repeat 2 180 0 720 176 6 22 chr10 10120795 10120977 -135468311 + (TCTA)n Simple_repeat Simple_repeat 2 180 0 602 216 6 0 chr10 10121002 10121178 -135468110 + (TCTG)n Simple_repeat Simple_repeat 4 180 0 734 185 12 8 chr10 10121196 10121457 -135467831 + (TCTA)n Simple_repeat Simple_repeat 1 262 0 272 277 4 2 chr10 10121512 10121615 -135467673 + L1MC/D LINE L1 4735 4838 -1308 30 89 0 0 chr10 10121739 10121818 -135467470 + AT_rich Low_complexity Low_complexity 1 79 0 360 292 167 5 chr10 10121942 10122158 -135467130 + L1MC/D LINE L1 5291 5534 -587 379 320 64 21 chr10 10122159 10122393 -135466895 + L1MC/D LINE L1 5573 5816 -1992 230 0 33 0 chr10 10122700 10122730 -135466558 + (TC)n Simple_repeat Simple_repeat 1 31 0 314 307 55 0 chr10 10123278 10123441 -135465847 + L1M4 LINE L1 4104 4275 -1871 180 111 0 0 chr10 10123475 10123502 -135465786 + (CA)n Simple_repeat Simple_repeat 2 28 0 347 327 18 5 chr10 10124256 10124476 -135464812 - L1M4 LINE L1 -2832 3314 3092 352 319 129 8 chr10 10124556 10124819 -135464469 - L1M4 LINE L1 -3166 2980 2686 13162 149 52 21 chr10 10124821 10126776 -135462512 - Tigger1 DNA MER2_type 0 2418 379 1190 83 12 6 chr10 10126776 10126945 -135462343 - L1PA7 LINE L1 -2 6152 5983 13162 149 52 21 chr10 10126945 10127333 -135461955 - Tigger1 DNA MER2_type -2039 379 4 248 274 48 48 chr10 10127393 10127561 -135461727 - L1M4 LINE L1 -3526 2620 2453 242 232 13 84 chr10 10127688 10127843 -135461445 + T-rich Low_complexity Low_complexity 3 146 0 28 29 0 0 chr10 10128367 10128402 -135460886 + AT_rich Low_complexity Low_complexity 1 35 0 409 293 121 25 chr10 10130069 10130267 -135459021 + MIR SINE MIR 30 246 -16 2168 139 0 0 chr10 10130388 10130698 -135458590 + AluSg SINE Alu 1 310 0 26 64 0 0 chr10 10130821 10130868 -135458420 + AT_rich Low_complexity Low_complexity 1 47 0 316 362 48 38 chr10 10130883 10131198 -135458090 - HAL1 LINE L1 -1076 1431 1114 375 338 124 10 chr10 10131786 10132076 -135457212 + MLT1K LTR MaLR 81 403 -185 34 24 0 0 chr10 10132806 10132847 -135456441 + AT_rich Low_complexity Low_complexity 1 41 0 1529 195 13 68 chr10 10132885 10133269 -135456019 - MLT1A2 LTR MaLR -11 379 1 38 61 0 0 chr10 10134569 10134635 -135454653 + AT_rich Low_complexity Low_complexity 1 66 0 284 326 20 14 chr10 10135497 10135644 -135453644 + (TATATG)n Simple_repeat Simple_repeat 5 152 0 452 316 40 29 chr10 10135652 10135927 -135453361 - LTR16B LTR ERVL -2 462 185 1347 217 10 59 chr10 10136699 10136881 -135452407 + MLT1A2 LTR MaLR 1 155 -219 2296 93 3 0 chr10 10136881 10137181 -135452107 + AluSx SINE Alu 1 301 -11 1347 217 10 59 chr10 10137181 10137390 -135451898 + MLT1A2 LTR MaLR 155 373 -1 1886 136 60 27 chr10 10137636 10138004 -135451284 - MSTC LTR MaLR -48 380 1 25 75 0 0 chr10 10138456 10138509 -135450779 + AT_rich Low_complexity Low_complexity 1 53 0 2184 110 0 0 chr10 10138539 10138858 -135450430 - AluSc SINE Alu 0 319 1 279 79 0 0 chr10 10139348 10139386 -135449902 + (A)n Simple_repeat Simple_repeat 1 38 0 2163 114 0 3 chr10 10140244 10140542 -135448746 - AluSx SINE Alu -15 297 1 21 0 0 0 chr10 10143298 10143319 -135445969 + AT_rich Low_complexity Low_complexity 1 21 0 438 269 123 41 chr10 10143322 10143541 -135445747 - MIR SINE MIR -8 254 18 2031 137 0 16 chr10 10143804 10144119 -135445169 - AluSq SINE Alu -3 310 1 412 299 0 9 chr10 10145481 10145588 -135443700 + L2 LINE L2 3188 3293 -20 2119 137 10 0 chr10 10145598 10145905 -135443383 - AluSx SINE Alu -2 310 1 524 239 104 18 chr10 10147271 10147434 -135441854 + MER5B DNA MER1_type 2 178 0 2175 114 3 13 chr10 10148037 10148345 -135440943 - AluSx SINE Alu -7 305 1 305 253 22 11 chr10 10148480 10148571 -135440717 + MER94 DNA DNA 9 100 -34 2427 164 0 5 chr10 10148743 10149163 -135440125 - MSTA LTR MaLR -2 426 9 23 0 0 0 chr10 10150211 10150234 -135439054 + AT_rich Low_complexity Low_complexity 1 23 0 37 52 0 0 chr10 10150280 10150338 -135438950 + AT_rich Low_complexity Low_complexity 1 58 0 656 161 0 0 chr10 10150503 10150621 -135438667 + Ricksha DNA DNA 2 119 -1062 1177 126 10 10 chr10 10150633 10150831 -135438457 + Ricksha DNA DNA 240 437 -2809 1871 164 55 24 chr10 10150831 10151379 -135437909 - MLT2A2 LTR ERVL 0 554 1 12667 160 35 19 chr10 10151379 10151737 -135437551 + Ricksha DNA DNA 433 784 -2462 2073 186 45 102 chr10 10151737 10152281 -135437007 + LTR9 LTR ERV1 1 504 -108 2102 115 0 7 chr10 10152281 10152577 -135436711 - AluSg SINE Alu -16 294 1 2073 186 45 102 chr10 10152577 10152681 -135436607 + LTR9 LTR ERV1 504 612 0 12667 160 35 19 chr10 10152681 10153330 -135435958 + Ricksha DNA DNA 784 1421 -1825 1971 130 0 61 chr10 10153330 10153660 -135435628 + AluSx SINE Alu 3 312 0 12667 160 35 19 chr10 10153660 10155338 -135433950 + Ricksha DNA DNA 1421 3238 -8 547 330 98 55 chr10 10155380 10156286 -135433002 - L2 LINE L2 -444 2870 1926 394 282 96 6 chr10 10156449 10156605 -135432683 - L1MC/D LINE L1 -2027 5781 5612 2010 112 54 0 chr10 10156884 10157162 -135432126 + AluSq SINE Alu 1 293 -20 206 107 71 0 chr10 10157567 10157623 -135431665 + GA-rich Low_complexity Low_complexity 3 62 0 22 35 0 0 chr10 10157663 10157692 -135431596 + AT_rich Low_complexity Low_complexity 1 29 0 793 139 0 0 chr10 10158432 10158561 -135430727 - L1PB1 LINE L1 0 6151 6023 641 168 16 0 chr10 10158629 10158754 -135430534 - L1PB1 LINE L1 -2 6149 6023 278 271 24 12 chr10 10158791 10158876 -135430412 + MIR3 SINE MIR 116 201 -7 2351 116 58 0 chr10 10160289 10160633 -135428655 + THE1B LTR MaLR 1 364 0 291 309 9 74 chr10 10160779 10160996 -135428292 + L2 LINE L2 1910 2112 -1202 292 296 114 45 chr10 10161322 10161542 -135427746 + MIR SINE MIR 4 238 -24 222 364 48 43 chr10 10161572 10161924 -135427364 + L2 LINE L2 2575 2928 -386 446 286 11 14 chr10 10164743 10164880 -135424408 + MIR SINE MIR 37 172 -36 2111 136 37 8 chr10 10165138 10165492 -135423796 + THE1B LTR MaLR 1 364 0 1278 177 8 21 chr10 10165558 10165801 -135423487 - AluJo SINE Alu 0 312 73 205 332 33 75 chr10 10165914 10166155 -135423133 + L2 LINE L2 2507 2737 -577 585 52 0 0 chr10 10166549 10166626 -135422662 + (TGAA)n Simple_repeat Simple_repeat 1 77 0 1568 177 3 52 chr10 10168376 10168686 -135420602 + AluJo SINE Alu 3 297 -15 221 345 109 0 chr10 10170483 10170593 -135418695 + MIR SINE MIR 5 126 -136 1778 171 10 16 chr10 10170938 10171248 -135418040 + AluJo SINE Alu 1 308 -4 2880 6 0 0 chr10 10171320 10171631 -135417657 + AluYa5 SINE Alu 1 311 0 1560 226 32 27 chr10 10172340 10172778 -135416510 - LTR47B LTR ERVL -3 440 1 2383 95 0 0 chr10 10173747 10174053 -135415235 - AluSx SINE Alu -6 306 1 976 105 0 14 chr10 10174558 10174701 -135414587 - AluSg/x SINE Alu 0 310 170 2239 92 3 22 chr10 10174704 10175018 -135414270 - AluSx SINE Alu -4 308 1 293 303 25 17 chr10 10175432 10175551 -135413737 - L3b LINE CR1 -202 1381 1262 1583 185 7 26 chr10 10175631 10175933 -135413355 + AluJo SINE Alu 1 296 -16 2141 95 0 7 chr10 10175937 10176244 -135413044 + AluSg SINE Alu 1 305 0 266 267 22 11 chr10 10176385 10176475 -135412813 + Charlie7 DNA MER1_type 1 91 -2521 2151 112 7 0 chr10 10176486 10176782 -135412506 + AluY SINE Alu 1 298 -13 918 257 36 41 chr10 10176786 10177198 -135412090 - L1ME2 LINE L1 -2 6162 5753 362 287 29 22 chr10 10177208 10177344 -135411944 - L1MDa LINE L1 -4022 2518 2382 3356 237 45 46 chr10 10177346 10179188 -135410100 - L1MD2 LINE L1 -21 6732 4898 649 237 0 0 chr10 10179198 10179316 -135409972 - FLAM_C SINE Alu -25 118 1 312 180 27 54 chr10 10179316 10179427 -135409861 - L1MD2 LINE L1 -1640 4900 4793 * 875 201 53 26 chr10 10179412 10179751 -135409537 - L1MD2 LINE L1 -2919 3621 3274 239 215 0 15 chr10 10179735 10179800 -135409488 - L1ME2 LINE L1 -493 5749 5686 * 1637 210 89 29 chr10 10179850 10180435 -135408853 - L1MD2 LINE L1 -4902 1638 1019 428 50 0 17 chr10 10180437 10180497 -135408791 + (TTTC)n Simple_repeat Simple_repeat 4 62 0 245 245 20 119 chr10 10181018 10181169 -135408119 - L1MD2 LINE L1 -5589 951 816 303 285 41 16 chr10 10181349 10181472 -135407816 - L1MD2 LINE L1 -6357 183 58 487 256 6 18 chr10 10181542 10181706 -135407582 - L1MEc LINE L1 -4314 2082 1921 892 176 29 33 chr10 10181892 10182102 -135407186 - MLT2B1 LTR ERVL -11 509 301 2219 87 47 3 chr10 10182789 10183089 -135406199 + AluSp SINE Alu 1 313 0 651 264 57 60 chr10 10183113 10183431 -135405857 - LTR16A1 LTR ERVL 0 457 141 220 158 70 0 chr10 10183844 10183901 -135405387 + (TA)n Simple_repeat Simple_repeat 2 62 0 993 162 0 0 chr10 10183926 10184085 -135405203 - FRAM SINE Alu -30 146 1 24 32 0 0 chr10 10184978 10185009 -135404279 + AT_rich Low_complexity Low_complexity 1 31 0 268 197 79 0 chr10 10185267 10185343 -135403945 + MIR SINE MIR 105 186 -76 207 100 0 0 chr10 10185922 10185952 -135403336 + (TCC)n Simple_repeat Simple_repeat 3 32 0 251 275 29 0 chr10 10186207 10186276 -135403012 - MIR SINE MIR -108 154 84 452 282 14 112 chr10 10187027 10187375 -135401913 + MER90 LTR ERV1 294 607 -7 200 35 35 0 chr10 10187498 10187527 -135401761 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 2284 57 0 7 chr10 10187530 10187812 -135401476 - AluY SINE Alu -31 280 1 201 39 0 0 chr10 10188154 10188180 -135401108 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 2064 145 0 10 chr10 10189437 10189741 -135399547 - AluSx SINE Alu -9 303 3 770 257 53 56 chr10 10189742 10190194 -135399094 - HsTC2 DNA Tc2 -14 1884 1247 4828 82 5 0 chr10 10190844 10191487 -135397801 - L1PA10 LINE L1 -4 6164 5519 751 257 32 11 chr10 10193584 10193771 -135395517 + MER20 DNA MER1_type 17 207 -12 672 284 47 5 chr10 10194752 10194967 -135394321 - MER58A DNA MER1_type 0 224 1 24 32 0 0 chr10 10195549 10195580 -135393708 + AT_rich Low_complexity Low_complexity 1 31 0 2100 115 3 10 chr10 10196173 10196477 -135392811 + AluSq SINE Alu 1 302 -11 228 259 0 0 chr10 10196505 10196559 -135392729 + (TAGA)n Simple_repeat Simple_repeat 4 57 0 2822 25 0 0 chr10 10196934 10197249 -135392039 - AluYb8 SINE Alu -3 315 1 189 74 0 0 chr10 10198181 10198208 -135391080 + (T)n Simple_repeat Simple_repeat 1 27 0 22 0 0 0 chr10 10198220 10198242 -135391046 + AT_rich Low_complexity Low_complexity 1 22 0 40575 37 2 7 chr10 10198333 10204129 -135385159 + L1PA3 LINE L1 390 6155 0 29 28 0 0 chr10 10204129 10204165 -135385123 + AT_rich Low_complexity Low_complexity 1 36 0 741 268 91 50 chr10 10204207 10204603 -135384685 - MLT1G1 LTR MaLR -183 412 1 23 33 0 0 chr10 10205771 10205801 -135383487 + AT_rich Low_complexity Low_complexity 1 30 0 413 286 166 45 chr10 10206026 10206331 -135382957 - L1ME3 LINE L1 -211 5951 5684 2552 47 3 0 chr10 10206331 10206630 -135382658 + AluY SINE Alu 1 300 -11 413 286 166 45 chr10 10206630 10206943 -135382345 - L1ME3 LINE L1 -478 5684 5258 745 290 86 17 chr10 10207020 10207541 -135381747 - L1ME3 LINE L1 -1091 5055 4499 1990 181 22 54 chr10 10207758 10207828 -135381460 - Tigger2a DNA MER2_type -2274 434 363 2205 113 7 0 chr10 10207828 10208129 -135381159 - AluSx SINE Alu -9 303 1 1990 181 22 54 chr10 10208129 10208506 -135380782 - Tigger2a DNA MER2_type -2345 363 1 370 292 36 70 chr10 10208531 10208915 -135380373 - L1ME3 LINE L1 -1984 4162 3792 28 0 0 0 chr10 10210297 10210325 -135378963 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr10 10210644 10210665 -135378623 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 10210709 10210730 -135378558 + AT_rich Low_complexity Low_complexity 1 21 0 2299 93 3 0 chr10 10211108 10211410 -135377878 - AluSx SINE Alu -9 303 1 27 0 0 0 chr10 10211544 10211571 -135377717 + AT_rich Low_complexity Low_complexity 1 27 0 2125 135 3 0 chr10 10211601 10211913 -135377375 - AluSq SINE Alu 0 313 1 23 33 0 0 chr10 10211942 10211972 -135377316 + AT_rich Low_complexity Low_complexity 1 30 0 231 265 52 44 chr10 10212131 10212267 -135377021 + L1M4 LINE L1 4802 4938 -1208 2295 275 62 10 chr10 10212425 10213407 -135375881 + L1MC2 LINE L1 344 1375 -4849 4067 179 35 15 chr10 10213415 10214676 -135374612 + L1PB4 LINE L1 4843 6129 -27 * 11212 207 32 13 chr10 10214665 10218460 -135370828 + L1PA16 LINE L1 2300 6166 0 1424 236 63 9 chr10 10218453 10218894 -135370394 + L1MC2 LINE L1 4299 4763 -1801 * 1927 224 23 121 chr10 10218894 10219558 -135369730 + MER77 LTR ERV1 3 601 -4 2470 229 45 60 chr10 10219562 10219595 -135369693 + L1MC2 LINE L1 4757 4789 -1973 2296 87 10 0 chr10 10219595 10219884 -135369404 + AluSc SINE Alu 1 292 -17 2470 229 45 60 chr10 10219884 10221462 -135367826 + L1MC2 LINE L1 4789 6356 -406 376 197 88 80 chr10 10223459 10223596 -135365692 - L2 LINE L2 -1 3312 3175 2762 145 19 11 chr10 10223626 10224103 -135365185 - L1PA15 LINE L1 -17 6148 5668 461 313 18 0 chr10 10224160 10224326 -135364962 - L1M4 LINE L1 -1050 5096 4928 2173 112 42 31 chr10 10224377 10224735 -135364553 + THE1B LTR MaLR 3 364 0 287 266 93 85 chr10 10224898 10225394 -135363894 - L1M4 LINE L1 -1541 4605 4106 1675 194 71 8 chr10 10225456 10225821 -135363467 - MLT1B LTR MaLR -2 388 1 462 233 167 11 chr10 10225850 10226120 -135363168 - L1MDa LINE L1 -3663 2877 2566 326 206 137 55 chr10 10226139 10226285 -135363003 - L1MDa LINE L1 -3966 2574 2417 2447 48 3 45 chr10 10226661 10226975 -135362313 - AluY SINE Alu -8 303 3 667 297 21 5 chr10 10226977 10227169 -135362119 - L2 LINE L2 -599 2715 2521 1647 251 87 50 chr10 10227177 10227754 -135361534 - MER77 LTR ERV1 -7 598 1 734 346 85 0 chr10 10227782 10228123 -135361165 - L2 LINE L2 -868 2446 2077 2087 110 7 7 chr10 10228594 10228886 -135360402 + AluSp SINE Alu 4 295 -18 427 281 85 26 chr10 10228922 10229192 -135360096 - L1ME2 LINE L1 -213 5951 5666 281 277 24 0 chr10 10229557 10229640 -135359648 + L1MC4a LINE L1 5603 5687 -2121 479 235 132 52 chr10 10229670 10230057 -135359231 + L1MC4a LINE L1 5757 6174 -1634 1225 290 89 29 chr10 10230186 10230913 -135358375 + L1MC4 LINE L1 7122 7892 -150 22 0 0 0 chr10 10231144 10231166 -135358122 + AT_rich Low_complexity Low_complexity 1 22 0 1304 299 72 52 chr10 10231310 10232278 -135357010 + L2 LINE L2 2328 3313 0 315 267 35 0 chr10 10232703 10232789 -135356499 - L2 LINE L2 -2 3270 3182 23 0 0 0 chr10 10233576 10233599 -135355689 + AT_rich Low_complexity Low_complexity 1 23 0 2424 87 0 7 chr10 10235083 10235392 -135353896 - AluSg SINE Alu -3 307 1 2078 114 9 16 chr10 10235741 10236056 -135353232 - AluSq SINE Alu 0 313 1 221 229 108 24 chr10 10236174 10236257 -135353031 - L2 LINE L2 0 3272 3183 * 335 238 17 171 chr10 10236248 10236429 -135352859 + MIR SINE MIR 36 188 -74 451 259 23 27 chr10 10236509 10236633 -135352655 - MER5B DNA MER1_type 0 189 40 26 82 0 0 chr10 10236633 10236694 -135352594 + AT_rich Low_complexity Low_complexity 1 61 0 1982 132 3 16 chr10 10236716 10237019 -135352269 + AluSx SINE Alu 1 299 -13 2478 73 0 0 chr10 10237120 10237420 -135351868 - AluY SINE Alu -11 300 1 41 72 0 0 chr10 10237510 10237593 -135351695 + AT_rich Low_complexity Low_complexity 1 83 0 220 299 90 0 chr10 10237626 10237693 -135351595 - L2 LINE L2 -44 3269 3197 186 43 0 0 chr10 10237793 10237816 -135351472 + (TGAA)n Simple_repeat Simple_repeat 3 25 0 401 265 78 54 chr10 10238244 10238410 -135350878 + MLT1L LTR MaLR 252 421 -194 1743 152 61 25 chr10 10238794 10239156 -135350132 + THE1C LTR MaLR 1 375 0 22 56 0 0 chr10 10239609 10239645 -135349643 + AT_rich Low_complexity Low_complexity 1 36 0 266 306 49 9 chr10 10240430 10240552 -135348736 - MIR SINE MIR -81 127 4 562 241 216 10 chr10 10240591 10240790 -135348498 - MIR SINE MIR -16 246 7 288 308 39 0 chr10 10240889 10240967 -135348321 + L2 LINE L2 3195 3275 -38 1053 211 75 0 chr10 10240981 10241090 -135348198 - L1MA9 LINE L1 -39 6273 6174 186 43 0 0 chr10 10241090 10241113 -135348175 + (TG)n Simple_repeat Simple_repeat 1 23 0 1053 211 75 0 chr10 10241113 10241269 -135348019 - L1MA9 LINE L1 -138 6174 5988 232 211 35 18 chr10 10241667 10241724 -135347564 + MIR SINE MIR 83 140 -68 301 273 73 9 chr10 10242187 10242297 -135346991 - MER106B DNA MER1_type 0 1059 943 1113 255 96 32 chr10 10242297 10242736 -135346552 - MLT1C LTR MaLR 0 467 1 1925 135 0 122 chr10 10242756 10243140 -135346148 + MER1B DNA MER1_type 1 337 0 351 44 0 0 chr10 10243143 10243188 -135346100 + (TG)n Simple_repeat Simple_repeat 2 46 0 856 274 18 14 chr10 10243311 10243534 -135345754 + MER58A DNA MER1_type 1 224 0 22 0 0 0 chr10 10243967 10243989 -135345299 + AT_rich Low_complexity Low_complexity 1 22 0 3874 177 99 10 chr10 10244119 10244908 -135344380 - MER21B LTR ERV1 -4 859 1 309 267 50 50 chr10 10244968 10245088 -135344200 - MIR SINE MIR -113 149 30 811 176 8 0 chr10 10245723 10245854 -135343434 - FLAM_C SINE Alu -11 132 1 203 169 51 0 chr10 10245877 10245936 -135343352 + (TA)n Simple_repeat Simple_repeat 2 63 0 208 130 87 0 chr10 10245969 10246061 -135343227 + (TA)n Simple_repeat Simple_repeat 1 100 0 1731 189 70 44 chr10 10246073 10246527 -135342761 + MLT1D LTR MaLR 40 505 0 2196 115 3 3 chr10 10247233 10247529 -135341759 - AluSx SINE Alu -16 296 1 996 221 4 35 chr10 10248020 10248246 -135341042 - MER20 DNA MER1_type 0 219 1 286 314 102 70 chr10 10249590 10250338 -135338950 + HAL1 LINE L1 57 828 -1679 1929 264 63 22 chr10 10250527 10251110 -135338178 + L1MDa LINE L1 1 607 -5933 512 251 24 19 chr10 10251139 10251346 -135337942 + L1MDa LINE L1 1078 1285 -5255 844 238 45 77 chr10 10251397 10251776 -135337512 + L1MDa LINE L1 2942 3308 -3232 504 262 0 24 chr10 10251770 10251896 -135337392 + L1MD2 LINE L1 6031 6153 -206 * 372 290 28 0 chr10 10251884 10252029 -135337259 + L1MD3 LINE L1 7832 7980 -15 * 282 320 59 10 chr10 10252068 10252271 -135337017 + HAL1 LINE L1 1107 1319 -1188 21 0 0 0 chr10 10252321 10252342 -135336946 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 10253004 10253025 -135336263 + AT_rich Low_complexity Low_complexity 1 21 0 403 317 24 77 chr10 10253796 10254004 -135335284 + MLT1J2 LTR MaLR 2 198 -248 1419 190 20 14 chr10 10254249 10254297 -135334991 + L1MB2 LINE L1 5452 5498 -686 6357 152 50 7 chr10 10254297 10255476 -135333812 + Tigger3b DNA MER2_type 2 1231 0 1419 190 20 14 chr10 10255476 10255722 -135333566 + L1MB2 LINE L1 5498 5748 -436 406 214 22 0 chr10 10255763 10255852 -135333436 - L1MB1 LINE L1 -274 5894 5804 731 277 39 28 chr10 10255854 10255898 -135333390 - L1M4 LINE L1 -1832 4314 4272 484 56 127 0 chr10 10255898 10255969 -135333319 + MADE1 DNA Mariner 1 80 0 731 277 39 28 chr10 10255969 10256209 -135333079 - L1M4 LINE L1 -1874 4272 4027 6905 109 12 6 chr10 10256242 10257376 -135331912 - L1MA3 LINE L1 -6 6299 5158 232 214 24 0 chr10 10257467 10257551 -135331737 - L1M4 LINE L1 -2196 3950 3865 248 88 263 0 chr10 10257598 10257655 -135331633 + L1PA14 LINE L1 6090 6161 0 823 214 22 2 chr10 10257740 10257930 -135331358 + L1MB2 LINE L1 5900 6092 -79 4882 134 24 22 chr10 10258120 10258954 -135330334 - L1PA15 LINE L1 -5 6160 5325 382 131 107 0 chr10 10258955 10259039 -135330249 + L1MB2 LINE L1 6077 6169 -2 528 186 0 0 chr10 10259105 10259207 -135330081 + L1MB8 LINE L1 6071 6172 -6 215 302 62 31 chr10 10259576 10259672 -135329616 + MIR SINE MIR 18 116 -92 219 170 0 0 chr10 10259702 10259749 -135329539 + (TA)n Simple_repeat Simple_repeat 2 48 0 1701 171 0 7 chr10 10261052 10261332 -135327956 + AluSx SINE Alu 23 300 -12 240 254 17 0 chr10 10261448 10261507 -135327781 + MLT1H1 LTR MaLR 30 89 -466 767 245 8 59 chr10 10261657 10261894 -135327394 + MLT1H1 LTR MaLR 329 553 -2 521 249 31 13 chr10 10262184 10262367 -135326921 + MLT1H LTR MaLR 372 549 0 24 0 0 0 chr10 10263345 10263369 -135325919 + AT_rich Low_complexity Low_complexity 1 24 0 1945 149 16 43 chr10 10264390 10264760 -135324528 + THE1B LTR MaLR 5 364 0 180 0 0 0 chr10 10264811 10264831 -135324457 + (CA)n Simple_repeat Simple_repeat 2 21 0 340 107 0 14 chr10 10265244 10265446 -135323842 + AluSx SINE Alu 26 291 -9 1907 134 31 0 chr10 10266985 10267276 -135322012 + AluSx SINE Alu 1 300 -12 188 310 35 0 chr10 10267548 10267606 -135321682 - L2 LINE L2 -4 3309 3250 25 31 0 0 chr10 10267640 10267672 -135321616 + AT_rich Low_complexity Low_complexity 1 32 0 355 294 44 15 chr10 10267867 10268003 -135321285 + MIR SINE MIR 53 192 -70 251 0 0 56 chr10 10268304 10268340 -135320948 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 490 304 124 55 chr10 10268403 10268926 -135320362 + L1MEd LINE L1 536 1094 -5025 1825 163 3 13 chr10 10268929 10269230 -135320058 + AluSx SINE Alu 1 298 -14 5335 129 12 37 chr10 10269908 10269985 -135319303 + L1PB3 LINE L1 5254 5331 -823 2202 109 3 10 chr10 10269985 10270297 -135318991 + AluSx SINE Alu 1 310 -2 5335 129 12 37 chr10 10270297 10271141 -135318147 + L1PB3 LINE L1 5331 6152 -2 307 299 0 10 chr10 10271691 10271827 -135317461 + L1ME LINE L1 5639 5773 -389 2145 143 0 0 chr10 10272007 10272314 -135316974 + AluSx SINE Alu 1 307 -5 24 53 0 0 chr10 10272473 10272511 -135316777 + AT_rich Low_complexity Low_complexity 1 38 0 512 168 0 19 chr10 10273768 10273875 -135315413 + (TATATG)n Simple_repeat Simple_repeat 6 110 0 237 152 0 0 chr10 10273881 10273927 -135315361 - LTR66 LTR ERVL -171 439 394 284 161 16 0 chr10 10273968 10274030 -135315258 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 25 65 0 0 chr10 10274044 10274090 -135315198 + AT_rich Low_complexity Low_complexity 1 46 0 801 282 49 35 chr10 10274289 10274431 -135314857 + L1ME3A LINE L1 5717 5855 -315 372 167 0 71 chr10 10274431 10274515 -135314773 - MADE1 DNA Mariner 0 80 3 801 282 49 35 chr10 10274515 10274720 -135314568 + L1ME3A LINE L1 5855 6069 -101 269 248 20 10 chr10 10274743 10274844 -135314444 + (TA)n Simple_repeat Simple_repeat 1 102 0 2256 98 30 0 chr10 10274867 10275164 -135314124 - AluSq SINE Alu -7 306 1 356 194 14 0 chr10 10275166 10275238 -135314050 - MER5A DNA MER1_type -116 73 1 2663 86 22 3 chr10 10275258 10275629 -135313659 - MER41A LTR ERV1 0 554 177 1972 121 0 0 chr10 10275731 10276011 -135313277 + AluSc SINE Alu 23 302 -7 661 307 215 36 chr10 10276070 10276254 -135313034 - L2 LINE L2 -221 3051 2901 714 257 11 16 chr10 10276254 10276441 -135312847 - MER5A DNA MER1_type -3 186 1 661 307 215 36 chr10 10276441 10276507 -135312781 - L2 LINE L2 -371 2901 2848 1841 196 37 8 chr10 10276507 10276890 -135312398 + MSTD LTR MaLR 3 396 0 661 307 215 36 chr10 10276890 10277530 -135311758 - L2 LINE L2 -424 2848 2005 198 167 0 0 chr10 10277787 10277823 -135311465 + (CA)n Simple_repeat Simple_repeat 1 36 0 48 43 0 0 chr10 10278161 10278230 -135311058 + AT_rich Low_complexity Low_complexity 1 69 0 1191 111 23 0 chr10 10278233 10278393 -135310895 - AluSp SINE Alu -19 294 128 2396 80 0 3 chr10 10278393 10278705 -135310583 - AluY SINE Alu 0 311 1 333 291 41 64 chr10 10279933 10280105 -135309183 - L1 LINE L1 -860 5286 5119 1518 127 0 4 chr10 10281825 10282061 -135307227 - L1PB1 LINE L1 -1 6150 5916 902 136 39 7 chr10 10282062 10282118 -135307170 + L1PB1 LINE L1 5725 5778 -373 243 88 0 0 chr10 10282118 10282152 -135307136 + (TG)n Simple_repeat Simple_repeat 2 35 0 902 136 39 7 chr10 10282152 10282249 -135307039 + L1PB1 LINE L1 5778 5883 -268 3836 120 8 7 chr10 10282651 10283244 -135306044 + L1PA16 LINE L1 5571 6164 -2 2226 88 0 0 chr10 10284384 10284667 -135304621 - AluSx SINE Alu -19 293 11 1194 142 46 17 chr10 10284692 10284932 -135304356 - L1MA5A LINE L1 -6 6291 6045 364 133 67 78 chr10 10284969 10285059 -135304229 + MER103 DNA DNA 4 92 -74 270 193 0 0 chr10 10285686 10285743 -135303545 + (CA)n Simple_repeat Simple_repeat 2 58 0 243 114 0 0 chr10 10286108 10286152 -135303136 + (CTGTG)n Simple_repeat Simple_repeat 3 46 0 2181 111 3 23 chr10 10286913 10287220 -135302068 + AluSp SINE Alu 1 301 -12 3019 111 31 8 chr10 10287228 10287707 -135301581 - L1PA14 LINE L1 -2 6159 5670 1066 228 61 19 chr10 10289115 10289428 -135299860 + MLT1A2 LTR MaLR 6 424 -43 180 0 0 0 chr10 10289428 10289448 -135299840 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 1971 134 7 0 chr10 10289448 10289725 -135299563 - AluSq SINE Alu -26 287 9 871 295 126 28 chr10 10289794 10290224 -135299064 - L2 LINE L2 -18 3295 2824 185 203 119 51 chr10 10290300 10290359 -135298929 - L2 LINE L2 -1061 2253 2191 1604 161 9 77 chr10 10290744 10291068 -135298220 + AluJo SINE Alu 1 302 -10 902 175 19 19 chr10 10291673 10291833 -135297455 - FRAM SINE Alu -17 159 1 263 267 80 0 chr10 10292874 10292949 -135296339 + MIR3 SINE MIR 105 185 -23 1821 159 36 32 chr10 10293048 10293356 -135295932 + AluJo SINE Alu 1 309 -3 416 237 44 18 chr10 10293363 10293477 -135295811 + MER5A DNA MER1_type 73 189 0 253 330 53 48 chr10 10297557 10297784 -135291504 - MIR SINE MIR 0 262 35 1875 156 0 0 chr10 10298381 10298664 -135290624 - AluSx SINE Alu -27 285 3 321 354 84 14 chr10 10298757 10298972 -135290316 + L2 LINE L2 2480 2709 -605 180 0 0 0 chr10 10299373 10299393 -135289895 + (TAA)n Simple_repeat Simple_repeat 1 20 0 258 314 12 0 chr10 10300023 10300109 -135289179 + MARNA DNA Mariner 408 494 -92 22 35 0 0 chr10 10300755 10300784 -135288504 + AT_rich Low_complexity Low_complexity 1 29 0 5176 179 20 18 chr10 10300789 10302085 -135287203 + L1MC2 LINE L1 5040 6333 -11 727 270 87 36 chr10 10302696 10303029 -135286259 - MLT1J1 LTR MaLR -31 415 66 26 0 0 0 chr10 10303167 10303193 -135286095 + AT_rich Low_complexity Low_complexity 1 26 0 423 0 0 0 chr10 10304616 10304663 -135284625 + (CA)n Simple_repeat Simple_repeat 2 48 0 2341 95 0 13 chr10 10305205 10305511 -135283777 - AluSp SINE Alu -11 302 1 25 0 0 0 chr10 10305519 10305544 -135283744 + AT_rich Low_complexity Low_complexity 1 25 0 327 145 0 16 chr10 10305833 10305895 -135283393 - MER51A LTR ERV1 -279 355 295 193 362 14 0 chr10 10305989 10306058 -135283230 - L2 LINE L2 -560 2754 2685 2229 167 41 5 chr10 10306122 10306535 -135282753 - MSTA LTR MaLR 0 428 1 1507 172 61 8 chr10 10306922 10307081 -135282207 - AluJo SINE Alu -23 289 109 387 0 0 0 chr10 10307081 10307124 -135282164 + (TG)n Simple_repeat Simple_repeat 2 44 0 1507 172 61 8 chr10 10307124 10307225 -135282063 - AluJo SINE Alu -203 109 15 334 278 0 52 chr10 10307461 10307576 -135281712 + MER5A DNA MER1_type 4 112 -77 29 47 0 0 chr10 10307832 10307875 -135281413 + AT_rich Low_complexity Low_complexity 1 43 0 405 311 38 0 chr10 10307956 10308062 -135281226 - MER91C DNA MER1_type 0 140 31 503 191 37 37 chr10 10309869 10310005 -135279283 - L1MA5A LINE L1 -3 6294 6159 40909 43 11 2 chr10 10310301 10316385 -135272903 - L1PA4 LINE L1 -3 6152 12 811 165 0 15 chr10 10316447 10316580 -135272708 - FLAM_C SINE Alu -2 131 1 690 200 0 0 chr10 10317225 10317345 -135271943 + FLAM_C SINE Alu 1 120 -13 2595 91 16 11 chr10 10317650 10318023 -135271265 + THE1C LTR MaLR 1 375 0 360 0 0 0 chr10 10318055 10318095 -135271193 + (TA)n Simple_repeat Simple_repeat 1 40 0 26 74 0 0 chr10 10319027 10319081 -135270207 + AT_rich Low_complexity Low_complexity 1 54 0 387 284 59 75 chr10 10319746 10320052 -135269236 - L3 LINE CR1 -30 1547 1247 351 316 45 8 chr10 10320058 10320191 -135269097 + MIR SINE MIR 53 190 -72 221 367 99 29 chr10 10320384 10320622 -135268666 - L2 LINE L2 -178 3094 2816 186 103 0 0 chr10 10320622 10320651 -135268637 + (TAA)n Simple_repeat Simple_repeat 1 29 0 221 367 99 29 chr10 10320651 10320770 -135268518 - L2 LINE L2 -456 2816 2707 233 271 41 41 chr10 10320903 10321025 -135268263 - MER94 DNA DNA -8 126 5 255 31 0 0 chr10 10321321 10321353 -135267935 + (TG)n Simple_repeat Simple_repeat 2 33 0 2285 109 3 0 chr10 10321973 10322285 -135267003 - AluSp SINE Alu 0 313 1 238 328 43 43 chr10 10323460 10323576 -135265712 + L2 LINE L2 3138 3253 -19 2293 153 25 35 chr10 10323765 10323966 -135265322 + MSTA LTR MaLR 1 202 -226 2514 58 0 3 chr10 10323966 10324278 -135265010 + AluY SINE Alu 1 311 0 2293 153 25 35 chr10 10324278 10324508 -135264780 + MSTA LTR MaLR 202 428 0 207 100 0 0 chr10 10325269 10325299 -135263989 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 37 39 0 0 chr10 10326005 10326056 -135263232 + AT_rich Low_complexity Low_complexity 1 51 0 2085 137 0 13 chr10 10326433 10326746 -135262542 - AluSc SINE Alu 0 309 1 2565 97 6 0 chr10 10326766 10327127 -135262161 - L1PB1 LINE L1 0 6151 5789 505 106 18 18 chr10 10327136 10327249 -135262039 + (TCTA)n Simple_repeat Simple_repeat 4 116 0 1955 79 0 0 chr10 10327252 10327519 -135261769 - L1PB1 LINE L1 -360 5791 5525 28 0 0 0 chr10 10327974 10328002 -135261286 + AT_rich Low_complexity Low_complexity 1 28 0 1850 153 3 3 chr10 10328089 10328396 -135260892 - L1MC1 LINE L1 -11 6322 6016 3525 152 0 0 chr10 10328404 10328931 -135260357 - MER1A DNA MER1_type 0 527 1 675 185 13 0 chr10 10328950 10329101 -135260187 - L1MC1 LINE L1 -394 5939 5787 * 1036 236 46 18 chr10 10329100 10329384 -135259904 + L1M3e LINE L1 1238 1529 -5501 516 181 0 0 chr10 10329390 10329473 -135259815 + AluSg/x SINE Alu 202 284 -25 1915 112 33 4 chr10 10329484 10329760 -135259528 + AluSg SINE Alu 1 284 -26 24 32 0 0 chr10 10329760 10329791 -135259497 + AT_rich Low_complexity Low_complexity 1 31 0 3142 198 32 0 chr10 10329892 10330580 -135258708 - L1MCa LINE L1 -5623 803 94 2569 102 0 0 chr10 10330561 10330587 -135258701 + L1PA10 LINE L1 5574 5599 -569 * 1294 77 11 27 chr10 10330587 10330770 -135258518 - L1PA10 LINE L1 -7 6161 5982 2569 102 0 0 chr10 10330770 10331117 -135258171 + L1PA10 LINE L1 5598 5947 -221 361 230 35 0 chr10 10331114 10331201 -135258087 - L1MCa LINE L1 -6317 109 20 * 217 214 84 92 chr10 10331708 10331839 -135257449 - L2 LINE L2 -3 3310 3181 198 0 0 0 chr10 10332664 10332686 -135256602 + (A)n Simple_repeat Simple_repeat 1 22 0 1800 128 20 99 chr10 10332769 10333114 -135256174 + AluYb8 SINE Alu 1 318 0 186 231 39 0 chr10 10333216 10333268 -135256020 + L2 LINE L2 2933 2986 -327 194 0 0 37 chr10 10333344 10333371 -135255917 + (CAA)n Simple_repeat Simple_repeat 2 27 0 579 321 44 14 chr10 10333533 10333829 -135255459 - LTR16C LTR ERVL -181 310 6 522 255 39 114 chr10 10334484 10334613 -135254675 + MIR SINE MIR 13 115 -147 2351 119 0 0 chr10 10334613 10334925 -135254363 + AluSx SINE Alu 1 312 0 522 255 39 114 chr10 10334925 10335050 -135254238 + MIR SINE MIR 115 248 -14 193 254 0 48 chr10 10336469 10336532 -135252756 - MIR SINE MIR -31 231 172 30 0 0 0 chr10 10336543 10336573 -135252715 + AT_rich Low_complexity Low_complexity 1 30 0 494 292 91 40 chr10 10336999 10337328 -135251960 + MLT1I LTR MaLR 61 406 -3 21 0 0 0 chr10 10338430 10338451 -135250837 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 10339342 10339363 -135249925 + AT_rich Low_complexity Low_complexity 1 21 0 666 246 78 0 chr10 10339368 10339652 -135249636 + L1M4 LINE L1 3139 3444 -2702 664 174 0 25 chr10 10339654 10339775 -135249513 + AluJb SINE Alu 81 198 -114 2831 255 64 35 chr10 10339785 10340859 -135248429 + L1M4 LINE L1 3468 4573 -1573 1648 235 143 75 chr10 10340845 10341731 -135247557 + L1MC3 LINE L1 4062 5008 -1138 * 1048 251 47 16 chr10 10341790 10342109 -135247179 - LTR52 LTR ERVL -92 329 1 4835 253 58 21 chr10 10342109 10343409 -135245879 - LTR52-int LTR ERVL 0 3556 2210 3544 239 65 19 chr10 10343475 10344727 -135244561 - LTR52-int LTR ERVL -1480 2098 794 198 0 0 0 chr10 10344783 10344805 -135244483 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 2205 216 82 51 chr10 10344808 10345396 -135243892 - LTR52-int LTR ERVL -2940 616 11 1678 204 30 33 chr10 10345418 10345814 -135243474 - LTR52 LTR ERVL -26 395 1 950 229 30 0 chr10 10345814 10346080 -135243208 + L1MC3 LINE L1 5005 5278 -868 1773 214 5 5 chr10 10346109 10346488 -135242800 + L1MC3 LINE L1 5545 5923 -1862 1042 227 57 57 chr10 10346488 10346823 -135242465 + MER2 DNA MER2_type 1 335 -10 4660 181 38 56 chr10 10346841 10347938 -135241350 + L1MC3 LINE L1 5917 6994 -791 3380 5 0 0 chr10 10347988 10348368 -135240920 - L1PA2 LINE L1 0 6155 5776 5243 18 2 0 chr10 10348368 10349400 -135239888 + L1PA2 LINE L1 4772 5804 -351 1288 230 11 53 chr10 10349409 10349766 -135239522 + L1MC3 LINE L1 7139 7480 -305 407 320 19 19 chr10 10350005 10350161 -135239127 - L2 LINE L2 0 3313 3158 195 129 0 0 chr10 10350360 10350391 -135238897 + (CA)n Simple_repeat Simple_repeat 1 31 0 1861 226 34 18 chr10 10350420 10350921 -135238367 - MER90 LTR ERV1 -18 596 88 2139 96 4 4 chr10 10351431 10351757 -135237531 - AluSg1 SINE Alu 0 326 1 2229 107 0 29 chr10 10352727 10353036 -135236252 + AluSg SINE Alu 1 300 -10 195 308 0 77 chr10 10353361 10353439 -135235849 - MIR SINE MIR -121 141 70 5128 176 14 10 chr10 10355007 10356768 -135232520 - L1PA16 LINE L1 -9 6157 4392 324 291 50 14 chr10 10357382 10357523 -135231765 - L1ME1 LINE L1 -80 6086 5941 347 296 48 69 chr10 10357565 10357856 -135231432 - L1MEc LINE L1 -4579 1817 1533 35 0 0 0 chr10 10357887 10357922 -135231366 + AT_rich Low_complexity Low_complexity 1 35 0 865 295 55 25 chr10 10358230 10358533 -135230755 + L1MEc LINE L1 1973 2265 -3950 2178 114 7 0 chr10 10358533 10358830 -135230458 - AluSq SINE Alu -14 299 1 865 295 55 25 chr10 10358830 10359276 -135230012 + L1MEc LINE L1 2265 2717 -3498 250 311 104 43 chr10 10359277 10359441 -135229847 + MLT2E LTR ERVL 1 174 -454 1151 263 73 32 chr10 10359636 10360073 -135229215 + LTR16A1 LTR ERVL 3 457 0 523 336 18 5 chr10 10360397 10360614 -135228674 + ERVL LTR ERVL 316 535 -5229 724 343 58 48 chr10 10360753 10361482 -135227806 + ERVL LTR ERVL 843 1578 -4186 2023 82 19 0 chr10 10362009 10362277 -135227011 - MER4E LTR ERV1 -28 738 466 509 266 10 68 chr10 10362280 10362472 -135226816 + ERVL LTR ERVL 1763 1943 -3711 782 308 5 5 chr10 10362528 10362749 -135226539 + ERVL LTR ERVL 2121 2341 -3423 * 2508 300 73 15 chr10 10362742 10363719 -135225569 + ERVL LTR ERVL 2506 3538 -2226 804 309 42 51 chr10 10363844 10364317 -135224971 - HERV16 LTR ERVL -2207 2789 2321 1495 233 149 10 chr10 10364372 10364780 -135224508 - MLT2B2 LTR ERVL -50 465 1 366 23 0 0 chr10 10365749 10365792 -135223496 + (TTTA)n Simple_repeat Simple_repeat 4 46 0 1963 129 4 0 chr10 10365794 10366072 -135223216 - AluY SINE Alu -32 279 1 522 324 89 37 chr10 10366196 10366545 -135222743 - LTR16B LTR ERVL 0 464 98 2504 112 3 6 chr10 10366583 10366939 -135222349 - THE1A LTR MaLR 0 355 1 333 286 56 48 chr10 10366989 10367220 -135222068 + L1ME LINE L1 5550 5782 -388 1100 243 36 49 chr10 10367220 10367374 -135221914 - MLT1D LTR MaLR 0 505 351 1799 130 0 65 chr10 10367374 10367681 -135221607 - AluSx SINE Alu -14 298 12 1100 243 36 49 chr10 10367681 10367855 -135221433 - MLT1D LTR MaLR -154 351 181 1661 192 0 7 chr10 10367878 10368165 -135221123 + AluJo SINE Alu 7 291 -21 216 0 0 0 chr10 10368754 10368778 -135220510 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2167 125 0 0 chr10 10368869 10369166 -135220122 + AluSx SINE Alu 1 297 -15 856 163 6 67 chr10 10369689 10369867 -135219421 + FRAM SINE Alu 2 168 -8 248 303 91 57 chr10 10370354 10370529 -135218759 + L3b LINE CR1 1205 1385 -198 2142 136 3 0 chr10 10370879 10371189 -135218099 + AluSx SINE Alu 1 311 -1 21 0 0 0 chr10 10371545 10371566 -135217722 + AT_rich Low_complexity Low_complexity 1 21 0 412 338 40 45 chr10 10372355 10372553 -135216735 - MIR SINE MIR -41 221 25 255 204 0 0 chr10 10372762 10372816 -135216472 + (TATG)n Simple_repeat Simple_repeat 4 57 0 453 213 0 0 chr10 10373425 10373505 -135215783 + Tigger5 DNA MER2_type 2237 2316 -7 303 28 0 0 chr10 10374781 10374817 -135214471 + (TG)n Simple_repeat Simple_repeat 1 36 0 210 317 96 0 chr10 10375521 10375625 -135213663 + MIR SINE MIR 148 261 -1 2276 97 0 7 chr10 10377171 10377471 -135211817 - AluSg SINE Alu -12 298 1 245 233 0 0 chr10 10377633 10377676 -135211612 + (TG)n Simple_repeat Simple_repeat 1 43 0 1137 280 59 8 chr10 10377714 10378224 -135211064 + L1M1 LINE L1 2665 3263 -4483 254 279 0 0 chr10 10378249 10378317 -135210971 + Tigger5 DNA MER2_type 2251 2318 -5 316 265 0 0 chr10 10378339 10378407 -135210881 - Tigger5 DNA MER2_type -2235 88 21 889 115 0 0 chr10 10378409 10378539 -135210749 + AluSg/x SINE Alu 181 310 0 474 191 36 0 chr10 10378579 10378663 -135210625 + Tigger5 DNA MER2_type 2237 2323 0 4737 262 40 41 chr10 10378671 10381264 -135208024 + L1MEc LINE L1 1919 4462 -1753 670 264 124 28 chr10 10381385 10381741 -135207547 + L1MEc LINE L1 4423 4812 -1403 1554 301 110 26 chr10 10381748 10382430 -135206858 + L2 LINE L2 1876 2614 -700 231 342 37 25 chr10 10382769 10382930 -135206358 - LTR16C LTR ERVL -3 488 326 237 342 45 0 chr10 10383304 10383415 -135205873 - L1M4 LINE L1 -1293 4853 4738 297 308 97 34 chr10 10383640 10384176 -135205112 - L1M4 LINE L1 -1745 4401 3832 401 79 0 0 chr10 10384352 10384415 -135204873 - L1PB1 LINE L1 0 6151 6089 358 311 61 30 chr10 10384436 10384831 -135204457 - L1MEd LINE L1 -5031 1088 682 543 293 68 24 chr10 10385976 10386225 -135203063 + LTR16B LTR ERVL 116 375 -89 324 368 8 8 chr10 10386513 10386646 -135202642 - MIR SINE MIR -118 144 12 492 260 114 49 chr10 10387530 10387838 -135201450 - MLT1J LTR MaLR -173 338 11 296 365 43 34 chr10 10387852 10388060 -135201228 + L3 LINE CR1 1367 1576 -1 239 293 98 83 chr10 10388113 10388246 -135201042 + L2 LINE L2 3138 3272 0 222 207 0 0 chr10 10388773 10388831 -135200457 + CT-rich Low_complexity Low_complexity 1 58 0 233 182 30 0 chr10 10388831 10388897 -135200391 + (CA)n Simple_repeat Simple_repeat 2 69 0 208 206 0 29 chr10 10388898 10388966 -135200322 + CT-rich Low_complexity Low_complexity 2 67 0 2108 121 0 0 chr10 10389143 10389459 -135199829 + AluSg SINE Alu 1 316 0 329 347 57 0 chr10 10390332 10390456 -135198832 + MIR3 SINE MIR 62 192 -16 2149 121 7 0 chr10 10391935 10392233 -135197055 - AluSx SINE Alu -12 300 1 1786 174 3 25 chr10 10393332 10393680 -135195608 - AluJo SINE Alu 0 341 1 593 334 71 56 chr10 10394222 10394616 -135194672 + L1M4 LINE L1 4281 4667 -1479 1917 137 4 0 chr10 10394616 10394894 -135194394 + AluSx SINE Alu 31 309 -3 593 334 71 56 chr10 10394894 10395429 -135193859 + L1M4 LINE L1 4667 5241 -905 1579 208 7 10 chr10 10395592 10395895 -135193393 + AluJb SINE Alu 1 302 -10 2231 120 0 0 chr10 10396503 10396812 -135192476 - AluSg SINE Alu -1 309 1 2724 131 22 77 chr10 10400109 10400783 -135188505 - MER4B LTR ERV1 0 903 3 1718 209 99 16 chr10 10400887 10401331 -135187957 - LTR29 LTR ERV1 -3 619 139 2159 82 17 0 chr10 10401367 10401658 -135187630 - MER41A LTR ERV1 0 554 259 5134 125 97 127 chr10 10401658 10403259 -135186029 + pTR5 LTR ERV1 745 2438 0 1571 118 73 0 chr10 10403262 10403508 -135185780 - MER41A LTR ERV1 -290 264 1 248 264 0 35 chr10 10403508 10403570 -135185718 - MER34 LTR ERV1 -483 59 1 1239 258 127 19 chr10 10403836 10404316 -135184972 - LTR10B LTR ERV1 -3 544 13 276 260 13 0 chr10 10404563 10404640 -135184648 - MER67B LTR ERV1 -2 659 582 1532 137 42 78 chr10 10404656 10405015 -135184273 + MER4A LTR ERV1 1 346 -318 481 185 237 63 chr10 10405025 10405295 -135183993 + MER4C LTR ERV1 149 465 0 1487 180 21 80 chr10 10405301 10405338 -135183950 - MER31B LTR ERV1 -101 365 327 1206 200 39 58 chr10 10405338 10405648 -135183640 + AluJo SINE Alu 1 304 -8 1487 180 21 80 chr10 10405648 10405987 -135183301 - MER31B LTR ERV1 -139 327 11 263 175 0 32 chr10 10407323 10407386 -135181902 + (TATG)n Simple_repeat Simple_repeat 4 64 0 1871 181 85 57 chr10 10407467 10407963 -135181325 + MER67D LTR ERV1 1 510 -4 670 240 65 99 chr10 10408565 10409033 -135180255 + MER110 LTR ERV1 61 491 0 202 345 12 0 chr10 10409069 10409153 -135180135 + L2 LINE L2 2606 2690 -624 6697 261 86 24 chr10 10409875 10414017 -135175271 - L1ME1 LINE L1 -21 6214 1863 5314 163 40 6 chr10 10414066 10415044 -135174244 - L1MC1 LINE L1 0 6333 5323 22 0 0 0 chr10 10415493 10415515 -135173773 + AT_rich Low_complexity Low_complexity 1 22 0 298 256 41 60 chr10 10415715 10416020 -135173268 - L1ME1 LINE L1 -4533 1863 1463 428 296 79 4 chr10 10416039 10416306 -135172982 - L1ME1 LINE L1 -5030 1366 1080 1745 276 77 51 chr10 10416316 10416363 -135172925 - L1ME1 LINE L1 -5451 945 901 1661 152 44 3 chr10 10416363 10416660 -135172628 - AluJo SINE Alu -3 309 1 1745 276 77 51 chr10 10416660 10416812 -135172476 - L1ME1 LINE L1 -5495 901 754 2085 117 0 0 chr10 10416812 10417102 -135172186 + AluSx SINE Alu 1 290 -22 1745 276 77 51 chr10 10417102 10417762 -135171526 - L1ME1 LINE L1 -5642 754 63 459 0 0 0 chr10 10418379 10418430 -135170858 + (TA)n Simple_repeat Simple_repeat 1 51 0 225 0 0 0 chr10 10418429 10418454 -135170834 + (CA)n Simple_repeat Simple_repeat 2 26 0 * 648 169 5 33 chr10 10418705 10418889 -135170399 + CT-rich Low_complexity Low_complexity 2 180 0 270 0 0 0 chr10 10419493 10419523 -135169765 + (TG)n Simple_repeat Simple_repeat 1 30 0 308 227 57 136 chr10 10420289 10420465 -135168823 - MIR SINE MIR -42 220 59 26 0 0 0 chr10 10421206 10421232 -135168056 + AT_rich Low_complexity Low_complexity 1 26 0 347 271 187 6 chr10 10421289 10421455 -135167833 - L2 LINE L2 0 3313 3118 3533 109 16 3 chr10 10421600 10422236 -135167052 + L1P5 LINE L1 5141 5783 -368 335 234 32 11 chr10 10422247 10422333 -135166955 - L1MC4 LINE L1 -1339 6703 6613 2404 97 25 0 chr10 10422333 10422694 -135166594 + L1PB1 LINE L1 5782 6151 0 9958 19 1 35 chr10 10422892 10424857 -135164431 + L1PA3 LINE L1 4216 6150 -5 189 0 0 0 chr10 10424887 10424908 -135164380 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 22 70 0 0 chr10 10425684 10425727 -135163561 + AT_rich Low_complexity Low_complexity 1 43 0 718 266 60 75 chr10 10426065 10426517 -135162771 - HAL1 LINE L1 -675 1832 1388 440 294 24 59 chr10 10426728 10426898 -135162390 - HAL1 LINE L1 -1234 1273 1110 1933 148 3 7 chr10 10426945 10427249 -135162039 + AluSx SINE Alu 1 303 -9 4804 63 27 3 chr10 10428227 10428865 -135160423 - L1PA8 LINE L1 -6 6166 5514 24 32 0 0 chr10 10430049 10430080 -135159208 + AT_rich Low_complexity Low_complexity 1 31 0 3017 174 50 20 chr10 10430080 10430764 -135158524 - L1MA6 LINE L1 -4 6296 5593 981 172 0 91 chr10 10430770 10430968 -135158320 - AluJo SINE Alu -30 282 103 753 185 0 15 chr10 10430987 10431122 -135158166 - AluJo SINE Alu -177 135 3 1582 207 8 6 chr10 10431122 10431475 -135157813 - L1MA6 LINE L1 -690 5610 5257 1530 210 3 20 chr10 10431486 10431781 -135157507 - AluJo SINE Alu -22 290 1 320 296 0 10 chr10 10432104 10432202 -135157086 + (TA)n Simple_repeat Simple_repeat 1 97 0 351 150 0 0 chr10 10432227 10432287 -135157001 + (TGGA)n Simple_repeat Simple_repeat 4 63 0 369 102 0 0 chr10 10432925 10432984 -135156304 + (TATG)n Simple_repeat Simple_repeat 2 60 0 253 323 65 8 chr10 10433641 10433765 -135155523 + MIR SINE MIR 120 250 -12 264 253 195 0 chr10 10433790 10433877 -135155411 - L2 LINE L2 0 3313 3210 361 185 39 15 chr10 10433909 10434039 -135155249 + (TA)n Simple_repeat Simple_repeat 2 134 0 216 172 54 11 chr10 10434052 10434145 -135155143 + (TA)n Simple_repeat Simple_repeat 2 98 0 314 289 0 11 chr10 10434145 10434235 -135155053 - L1MC4 LINE L1 -1340 6702 6614 * 327 261 11 33 chr10 10434168 10434260 -135155028 + L1MC4 LINE L1 6614 6703 -1339 341 121 65 25 chr10 10434260 10434659 -135154629 + (TA)n Simple_repeat Simple_repeat 1 415 0 271 221 35 9 chr10 10434671 10434784 -135154504 + (TA)n Simple_repeat Simple_repeat 1 116 0 564 212 43 86 chr10 10434815 10435070 -135154218 - L2 LINE L2 -157 3156 2913 245 254 0 70 chr10 10435190 10435261 -135154027 + L2 LINE L2 3203 3268 -4 288 239 28 0 chr10 10436650 10436721 -135152567 + L1ME LINE L1 5734 5806 -315 602 162 0 19 chr10 10438053 10438158 -135151130 - MLT1A2 LTR MaLR -271 103 1 1345 198 50 31 chr10 10438716 10439074 -135150214 - MLT1A1 LTR MaLR 0 365 1 271 251 17 31 chr10 10440264 10440382 -135148906 - MIR SINE MIR -63 145 32 396 373 65 31 chr10 10440452 10440774 -135148514 - L2 LINE L2 -923 2391 2059 258 241 133 12 chr10 10440805 10440888 -135148400 + MER46C DNA MER2_type 28 120 -218 315 307 50 0 chr10 10440943 10441044 -135148244 - HERVL LTR ERVL -3202 2452 2347 942 258 72 32 chr10 10441332 10441799 -135147489 + MER39 LTR ERV1 8 707 0 1469 243 111 4 chr10 10443072 10443524 -135145764 - MER97a DNA MER1_type? -11 883 384 6809 171 58 13 chr10 10443526 10445903 -135143385 - L1MA7 LINE L1 -9 6282 3807 1215 263 66 24 chr10 10445906 10446287 -135143001 - MER97b DNA MER1_type? -656 397 1 216 0 0 0 chr10 10447422 10447446 -135141842 + (CA)n Simple_repeat Simple_repeat 2 25 0 638 108 0 10 chr10 10447447 10447549 -135141739 + (TA)n Simple_repeat Simple_repeat 2 102 0 615 301 23 87 chr10 10448473 10448908 -135140380 + L2 LINE L2 2907 3313 0 265 326 20 20 chr10 10449636 10449734 -135139554 + MIR SINE MIR 27 124 -84 24 32 0 0 chr10 10449899 10449930 -135139358 + AT_rich Low_complexity Low_complexity 1 31 0 24 32 0 0 chr10 10450786 10450817 -135138471 + AT_rich Low_complexity Low_complexity 1 31 0 213 319 117 0 chr10 10450990 10451084 -135138204 + MIR3 SINE MIR 98 202 -6 1823 83 20 8 chr10 10451299 10451551 -135137737 - AluSp SINE Alu 0 313 59 1341 225 126 39 chr10 10453711 10454075 -135135213 - MSTD LTR MaLR 0 396 1 795 51 0 0 chr10 10456859 10456957 -135132331 + HY3 scRNA scRNA 2 99 -2 180 176 0 0 chr10 10457082 10457116 -135132172 + (TA)n Simple_repeat Simple_repeat 2 35 0 183 346 72 53 chr10 10459761 10459969 -135129319 + MIR SINE MIR 34 245 -17 552 77 0 0 chr10 10460064 10460142 -135129146 - L1PA7 LINE L1 -2 6152 6075 1550 59 17 59 chr10 10461197 10461435 -135127853 + L1PA8 LINE L1 5939 6166 -6 665 178 62 0 chr10 10461448 10461577 -135127711 - AluSg/x SINE Alu -6 306 170 253 179 0 0 chr10 10461680 10461719 -135127569 - Alu SINE Alu -262 39 1 264 241 9 125 chr10 10461776 10461851 -135127437 + L1M4 LINE L1 4008 4069 -2077 1639 62 0 0 chr10 10461851 10462066 -135127222 + AluY SINE Alu 86 300 0 264 241 9 125 chr10 10462066 10462101 -135127187 + L1M4 LINE L1 4069 4106 -2040 1186 272 113 24 chr10 10462101 10462453 -135126835 + L1MEc LINE L1 292 712 -5684 2062 176 51 10 chr10 10462453 10462867 -135126421 + MSTB1 LTR MaLR 2 432 0 1186 272 113 24 chr10 10462867 10463065 -135126223 + L1MEc LINE L1 712 891 -5505 634 263 61 5 chr10 10463072 10463285 -135126003 + L1MC2 LINE L1 34 258 -6168 3073 219 105 29 chr10 10463286 10464441 -135124847 + L1MC2 LINE L1 778 2019 -4407 1316 252 24 0 chr10 10464447 10464784 -135124504 - L1M1 LINE L1 -4533 3032 2688 1092 167 34 5 chr10 10464786 10464990 -135124298 + MER2 DNA MER2_type 2 211 -134 2454 63 0 3 chr10 10465032 10465332 -135123956 - AluY SINE Alu -12 299 1 1642 235 29 29 chr10 10465391 10466158 -135123130 - L1M3c LINE L1 -4520 2517 1810 1401 279 77 3 chr10 10466403 10466780 -135122508 - L1M3c LINE L1 -6619 411 7 6059 257 37 20 chr10 10466793 10469195 -135120093 + L1MC2 LINE L1 2054 4492 -1934 359 148 0 0 chr10 10469195 10469273 -135120015 + AluSp/q SINE Alu 233 310 0 6059 257 37 20 chr10 10469273 10469569 -135119719 + L1MC2 LINE L1 4492 4781 -1645 1474 218 112 4 chr10 10469731 10470221 -135119067 + L1MC2 LINE L1 4799 5341 -1085 39 74 0 0 chr10 10470241 10470322 -135118966 + AT_rich Low_complexity Low_complexity 1 81 0 25 0 0 0 chr10 10470412 10470437 -135118851 + AT_rich Low_complexity Low_complexity 1 25 0 5698 134 38 3 chr10 10470601 10471820 -135117468 - L1PA13 LINE L1 -13 6150 4888 5124 189 36 12 chr10 10471822 10473051 -135116237 + L1MC2 LINE L1 5360 6618 -6 2364 262 133 31 chr10 10473058 10475273 -135114015 + L1MEc LINE L1 878 3300 -2915 1476 265 134 19 chr10 10475698 10476039 -135113249 + L1MEc LINE L1 3250 3550 -2665 2273 108 0 0 chr10 10476039 10476346 -135112942 + AluSx SINE Alu 1 307 -5 1476 265 134 19 chr10 10476346 10476526 -135112762 + L1MEc LINE L1 3550 3708 -2507 333 47 0 0 chr10 10476526 10476569 -135112719 + (CA)n Simple_repeat Simple_repeat 2 44 0 1476 265 134 19 chr10 10476569 10476745 -135112543 + L1MEc LINE L1 3708 4029 -2186 589 290 37 71 chr10 10476987 10477107 -135112181 - MIR SINE MIR -1 261 139 1999 128 0 14 chr10 10477107 10477429 -135111859 - AluSq SINE Alu 0 318 1 589 290 37 71 chr10 10477429 10477576 -135111712 - MIR SINE MIR -123 139 2 1182 124 0 11 chr10 10477925 10478102 -135111186 - FRAM SINE Alu -3 173 1 23 68 0 0 chr10 10478558 10478602 -135110686 + AT_rich Low_complexity Low_complexity 1 44 0 1263 247 83 20 chr10 10479517 10479914 -135109374 + L1MCa LINE L1 23 444 -5982 446 138 88 0 chr10 10479944 10480024 -135109264 + L1MC2 LINE L1 6247 6333 -11 1880 166 33 28 chr10 10480318 10480680 -135108608 - THE1B LTR MaLR 0 364 1 1641 261 86 49 chr10 10480770 10481583 -135107705 - L1ME3A LINE L1 -11 6970 6128 203 61 30 0 chr10 10481914 10481947 -135107341 + (CAAA)n Simple_repeat Simple_repeat 1 34 0 182 36 0 36 chr10 10481990 10482018 -135107270 + (TTTTG)n Simple_repeat Simple_repeat 4 30 0 1180 292 51 47 chr10 10482428 10482888 -135106400 - L1ME3A LINE L1 -864 6093 5627 2356 74 0 3 chr10 10482888 10483187 -135106101 - AluY SINE Alu -13 298 1 1180 292 51 47 chr10 10483187 10483531 -135105757 - L1ME3A LINE L1 -1330 5627 5286 362 152 15 0 chr10 10483585 10483651 -135105637 - LTR41 LTR ERVL -5 768 702 237 253 0 50 chr10 10483657 10483756 -135105532 - L1MC4 LINE L1 -1339 6703 6610 328 262 16 145 chr10 10483766 10484083 -135105205 - LTR41 LTR ERVL -60 713 438 339 245 82 10 chr10 10484407 10484505 -135104783 - LTR41 LTR ERVL -586 187 83 1040 276 95 25 chr10 10484535 10485125 -135104163 - L1ME3A LINE L1 -1853 5104 4474 771 288 21 16 chr10 10485305 10485548 -135103740 + LTR16B LTR ERVL 221 464 0 1138 268 76 83 chr10 10485596 10486365 -135102923 - L1M4b LINE L1 -2606 4351 3578 2086 134 0 0 chr10 10486365 10486671 -135102617 - AluSg SINE Alu -4 306 1 1138 268 76 83 chr10 10486671 10487532 -135101756 - L1M4b LINE L1 -3379 3578 2770 637 24 0 0 chr10 10487696 10487781 -135101507 - L1PA4 LINE L1 -142 6013 5929 403 344 125 14 chr10 10487807 10488162 -135101126 - L1M4b LINE L1 -5050 1910 1419 790 299 69 53 chr10 10488187 10488683 -135100605 + MLT1G1 LTR MaLR 1 595 0 1981 153 122 13 chr10 10489140 10489526 -135099762 + MSTA LTR MaLR 1 428 0 2008 173 20 3 chr10 10489558 10489916 -135099372 + MLT1A1 LTR MaLR 1 364 -1 297 305 74 0 chr10 10490172 10490267 -135099021 - MIR SINE MIR -158 104 3 719 256 19 10 chr10 10493276 10493483 -135095805 - MLT1A1 LTR MaLR 0 365 157 660 120 0 10 chr10 10493497 10493597 -135095691 - AluYb8 SINE Alu -16 302 204 709 117 51 15 chr10 10493603 10493740 -135095548 - MLT1A1 LTR MaLR -215 150 9 183 259 47 71 chr10 10494143 10494228 -135095060 + L2 LINE L2 3189 3271 -1 2049 140 39 22 chr10 10495783 10496141 -135093147 - THE1B LTR MaLR 0 364 1 1373 249 81 43 chr10 10496729 10497259 -135092029 + L1MC4 LINE L1 6491 7040 -1002 1122 284 82 27 chr10 10497283 10497502 -135091786 + L1MC4 LINE L1 7232 7438 -604 457 102 0 91 chr10 10497502 10497539 -135091749 + MADE1 DNA Mariner 1 40 -40 2328 108 0 0 chr10 10497539 10497834 -135091454 - AluSc SINE Alu -14 295 1 457 102 0 91 chr10 10497834 10497884 -135091404 + MADE1 DNA Mariner 40 80 0 1122 284 82 27 chr10 10497884 10498253 -135091035 + L1MC4 LINE L1 7438 7852 -190 24 0 0 0 chr10 10498870 10498894 -135090394 + AT_rich Low_complexity Low_complexity 1 24 0 812 253 39 0 chr10 10499053 10499235 -135090053 - MER5A DNA MER1_type 0 189 1 3877 172 41 23 chr10 10500128 10500902 -135088386 - L1MA7 LINE L1 0 6291 5532 2143 129 7 0 chr10 10500902 10501197 -135088091 - AluSp SINE Alu -16 297 1 3877 172 41 23 chr10 10501197 10502163 -135087125 - L1MA7 LINE L1 -759 5532 4478 1421 210 24 6 chr10 10502194 10502532 -135086756 + L1 LINE L1 3850 4193 -1953 1369 164 105 4 chr10 10502534 10502772 -135086516 + AluJb SINE Alu 2 263 -49 396 0 0 0 chr10 10502800 10502844 -135086444 + (CA)n Simple_repeat Simple_repeat 1 44 0 411 193 11 0 chr10 10502853 10502941 -135086347 + MLT1A2 LTR MaLR 269 357 -17 342 349 155 9 chr10 10503285 10503517 -135085771 - L1MEc LINE L1 -6094 302 37 358 296 26 40 chr10 10503764 10503916 -135085372 - HAL1b LINE L1 -857 491 342 651 111 0 0 chr10 10504692 10504791 -135084497 + AluSg/x SINE Alu 207 305 -7 4001 167 11 10 chr10 10504946 10505279 -135084009 - L1PA16 LINE L1 -9 6157 5826 2296 111 0 13 chr10 10505279 10505595 -135083693 - AluSx SINE Alu 0 312 1 4001 167 11 10 chr10 10505595 10505984 -135083304 - L1PA16 LINE L1 -340 5826 5434 22 0 0 0 chr10 10506030 10506052 -135083236 + AT_rich Low_complexity Low_complexity 1 22 0 25 31 0 0 chr10 10506682 10506714 -135082574 + AT_rich Low_complexity Low_complexity 1 32 0 605 234 9 7 chr10 10506879 10507117 -135082171 - LTR16B LTR ERVL -175 289 1 226 336 88 26 chr10 10507129 10507242 -135082046 - MIR SINE MIR -117 145 26 195 42 0 0 chr10 10507245 10507269 -135082019 + (TAGG)n Simple_repeat Simple_repeat 2 25 0 400 281 102 18 chr10 10507900 10508067 -135081221 - MLT1J2 LTR MaLR -267 183 3 2344 82 7 0 chr10 10508222 10508525 -135080763 - AluSp SINE Alu -8 305 1 328 358 22 7 chr10 10508786 10508923 -135080365 + MIR3 SINE MIR 7 145 -63 990 288 75 7 chr10 10509950 10510339 -135078949 - MLT1J1 LTR MaLR 0 446 38 330 351 53 11 chr10 10510429 10510617 -135078671 - MIR SINE MIR -66 196 1 195 324 68 0 chr10 10511406 10511480 -135077808 + MIR SINE MIR 65 143 -65 264 289 87 19 chr10 10511594 10511698 -135077590 - MIR SINE MIR -65 143 33 204 83 62 0 chr10 10512149 10512197 -135077091 + (TA)n Simple_repeat Simple_repeat 2 52 0 1709 208 32 5 chr10 10512769 10513149 -135076139 + MLT1B LTR MaLR 1 390 0 570 326 16 40 chr10 10514014 10514197 -135075091 + MLT1I LTR MaLR 75 250 -159 1580 211 18 101 chr10 10514197 10514743 -135074545 - MLT1D LTR MaLR -4 501 1 570 326 16 40 chr10 10514743 10514863 -135074425 + MLT1I LTR MaLR 250 371 -38 253 333 44 11 chr10 10515033 10515216 -135074072 - L1ME LINE L1 -409 5712 5524 2103 135 0 0 chr10 10517067 10517364 -135071924 + AluSc SINE Alu 1 297 -12 1672 186 0 11 chr10 10518446 10518726 -135070562 + AluJb SINE Alu 5 281 -31 2147 113 7 13 chr10 10519619 10519900 -135069388 + AluSg SINE Alu 1 282 -28 240 35 0 0 chr10 10519900 10519929 -135069359 + (TC)n Simple_repeat Simple_repeat 1 29 0 198 0 0 0 chr10 10519928 10519950 -135069338 + (CA)n Simple_repeat Simple_repeat 1 22 0 * 2147 113 7 13 chr10 10519929 10519970 -135069318 + AluSg SINE Alu 282 300 -10 24 0 0 0 chr10 10520267 10520291 -135068997 + AT_rich Low_complexity Low_complexity 1 24 0 982 289 88 13 chr10 10520308 10520764 -135068524 - LTR33 LTR ERVL -9 512 23 185 346 74 19 chr10 10522109 10522271 -135067017 - L2 LINE L2 -10 3303 3133 565 278 40 28 chr10 10524750 10524926 -135064362 + MER45A DNA AcHobo 1 178 0 486 294 81 57 chr10 10526159 10526407 -135062881 - MIR SINE MIR 0 262 9 461 356 76 20 chr10 10526487 10526790 -135062498 + MLT1I LTR MaLR 73 392 -17 329 353 112 0 chr10 10526988 10527104 -135062184 + MIR SINE MIR 17 145 -63 2027 240 42 13 chr10 10527161 10527860 -135061428 + L1MC3 LINE L1 4578 5296 -850 * 2385 220 37 22 chr10 10527858 10528541 -135060747 + L1MB2 LINE L1 4133 4825 -1321 866 197 0 0 chr10 10528541 10528688 -135060600 + AluSg/x SINE Alu 157 303 -7 742 206 18 6 chr10 10528690 10528860 -135060428 + L1MB2 LINE L1 4819 4990 -1156 326 263 8 17 chr10 10528870 10528988 -135060300 - L1MA9 LINE L1 -157 6155 6039 3832 176 37 53 chr10 10529040 10530244 -135059044 + L1MB2 LINE L1 4980 6171 0 * 5783 195 42 61 chr10 10530240 10530837 -135058451 + L1MC3 LINE L1 5283 5890 -1895 2427 72 0 3 chr10 10530837 10531141 -135058147 - AluY SINE Alu -8 303 1 5783 195 42 61 chr10 10531141 10532218 -135057070 + L1MC3 LINE L1 5890 6925 -860 326 220 11 22 chr10 10532231 10532284 -135057004 + L1MC4a LINE L1 6779 6832 -976 315 104 0 0 chr10 10532284 10532332 -135056956 + (CA)n Simple_repeat Simple_repeat 1 48 0 326 220 11 22 chr10 10532332 10532369 -135056919 + L1MC4a LINE L1 6832 6868 -940 189 0 0 0 chr10 10534339 10534360 -135054928 + (T)n Simple_repeat Simple_repeat 1 21 0 1391 182 11 12 chr10 10535673 10536228 -135053060 - MER6 DNA MER2_type -1 864 1 1836 131 0 0 chr10 10537218 10537470 -135051818 - AluSg SINE Alu -16 294 43 368 308 122 52 chr10 10538629 10538801 -135050487 + MIR SINE MIR 30 213 -49 330 243 118 66 chr10 10539392 10539544 -135049744 - MIR SINE MIR -73 189 30 195 204 0 0 chr10 10540052 10540101 -135049187 + (TA)n Simple_repeat Simple_repeat 1 49 0 * 227 169 0 34 chr10 10540056 10540115 -135049173 + L1MC4 LINE L1 6648 6704 -1338 182 37 37 0 chr10 10540125 10540152 -135049136 + (TA)n Simple_repeat Simple_repeat 1 28 0 420 312 49 56 chr10 10541191 10541582 -135047706 + L1ME LINE L1 227 614 -5591 23 0 0 0 chr10 10541999 10542022 -135047266 + AT_rich Low_complexity Low_complexity 1 23 0 427 314 117 24 chr10 10542092 10542382 -135046906 + L1ME LINE L1 1949 2265 -4131 311 318 195 36 chr10 10542455 10542902 -135046386 + L3 LINE CR1 638 1155 -422 1902 143 7 0 chr10 10543652 10543932 -135045356 - AluSx SINE Alu 0 312 31 466 321 160 5 chr10 10544043 10544255 -135045033 + MIR SINE MIR 2 246 -16 190 268 12 85 chr10 10545013 10545095 -135044193 - MIR SINE MIR -77 185 110 21 36 0 0 chr10 10545306 10545334 -135043954 + AT_rich Low_complexity Low_complexity 1 28 0 952 204 48 109 chr10 10546625 10547002 -135042286 + LTR26B LTR ERV1 1 354 -177 213 39 0 0 chr10 10548355 10548381 -135040907 + (T)n Simple_repeat Simple_repeat 1 26 0 549 333 15 5 chr10 10548780 10548981 -135040307 - MIR SINE MIR -57 205 3 2082 133 10 3 chr10 10549232 10549533 -135039755 - AluSc SINE Alu -6 303 1 1179 198 3 73 chr10 10549792 10550106 -135039182 + MLT2B1 LTR ERVL 1 292 -228 2566 186 19 25 chr10 10550109 10550442 -135038846 - MER41E LTR ERV1 0 512 182 2830 99 0 3 chr10 10550442 10550817 -135038471 - THE1C LTR MaLR -1 374 1 2566 186 19 25 chr10 10550817 10550998 -135038290 - MER41E LTR ERV1 -330 182 1 403 276 8 16 chr10 10551081 10551208 -135038080 + MLT2B1 LTR ERVL 343 468 -52 180 146 67 0 chr10 10551230 10551319 -135037969 + (TA)n Simple_repeat Simple_repeat 2 96 0 317 102 0 0 chr10 10551328 10551377 -135037911 + MLT2B1 LTR ERVL 472 520 0 368 340 0 35 chr10 10551402 10551546 -135037742 + MIR SINE MIR 3 141 -121 1706 169 27 32 chr10 10551652 10552024 -135037264 + L1MA3 LINE L1 5926 6295 -10 23 0 0 0 chr10 10552734 10552757 -135036531 + AT_rich Low_complexity Low_complexity 1 23 0 180 262 0 0 chr10 10553034 10553076 -135036212 - L2 LINE L2 -31 3282 3241 22 70 0 0 chr10 10554753 10554796 -135034492 + AT_rich Low_complexity Low_complexity 1 43 0 226 241 86 9 chr10 10554824 10554940 -135034348 - LTR16C LTR ERVL 0 491 367 265 271 66 8 chr10 10556967 10557089 -135032199 - L1M3 LINE L1 -618 5562 5434 220 179 0 0 chr10 10557361 10557400 -135031888 - MIR SINE MIR -212 50 12 1178 259 123 7 chr10 10557753 10558167 -135031121 + LTR40b LTR ERVL 1 462 0 868 360 115 26 chr10 10558288 10559193 -135030095 + L2 LINE L2 1993 2977 -337 382 241 103 0 chr10 10559580 10559696 -135029592 + MLT1H1 LTR MaLR 417 544 -11 854 243 83 71 chr10 10559700 10560001 -135029287 - ERVL LTR ERVL -1236 4528 4219 2320 98 0 20 chr10 10560001 10560306 -135028982 - AluSq SINE Alu -14 299 1 854 243 83 71 chr10 10560306 10560411 -135028877 - ERVL LTR ERVL -1545 4219 4117 377 312 50 47 chr10 10562825 10563510 -135025778 + L1M4 LINE L1 3087 3773 -2373 29 0 0 25 chr10 10563814 10563841 -135025447 + AT_rich Low_complexity Low_complexity 1 28 -11 1828 47 0 4 chr10 10563841 10564075 -135025213 - L1PA4 LINE L1 -3 6152 5920 29 0 0 25 chr10 10564075 10564087 -135025201 + AT_rich Low_complexity Low_complexity 28 39 0 253 239 145 22 chr10 10564962 10565100 -135024188 - MER104 DNA Tc2 -4 176 22 336 48 0 0 chr10 10565671 10565713 -135023575 + (CA)n Simple_repeat Simple_repeat 2 43 0 3854 179 78 31 chr10 10566642 10566664 -135022624 - L1MCa LINE L1 -5424 1002 982 3949 94 11 4 chr10 10566664 10567214 -135022074 + MER41A LTR ERV1 1 554 0 3854 179 78 31 chr10 10567214 10567343 -135021945 - L1MCa LINE L1 -5444 982 860 1488 161 158 60 chr10 10567343 10567729 -135021559 + MSTB LTR MaLR 1 424 -2 3854 179 78 31 chr10 10567729 10568515 -135020773 - L1MCa LINE L1 -5566 860 20 714 118 17 42 chr10 10568567 10568686 -135020602 - AluJb SINE Alu -163 149 34 26 0 0 0 chr10 10569762 10569788 -135019500 + AT_rich Low_complexity Low_complexity 1 26 0 1000 140 0 7 chr10 10569793 10569936 -135019352 + AluJb SINE Alu 1 142 -170 1629 110 9 0 chr10 10570037 10570256 -135019032 - AluSx SINE Alu -91 221 1 1845 147 20 124 chr10 10570993 10571317 -135017971 - MER7C DNA MER2_type -2607 421 154 3166 151 47 0 chr10 10571317 10571874 -135017414 - L1PB3 LINE L1 -6 6148 5566 1845 147 20 124 chr10 10571874 10571991 -135017297 - MER7C DNA MER2_type -2874 154 26 2380 77 3 0 chr10 10572441 10572770 -135016518 + AluY SINE Alu 10 311 0 1655 177 108 0 chr10 10573091 10573435 -135015853 + MSTA LTR MaLR 2 382 -46 1025 214 5 0 chr10 10573488 10573694 -135015594 + Tigger3(Golem) DNA MER2_type 46 252 -2777 230 135 0 0 chr10 10573720 10573757 -135015531 + MSTA LTR MaLR 390 426 -2 26 30 0 0 chr10 10574120 10574153 -135015135 + AT_rich Low_complexity Low_complexity 1 33 0 297 263 91 0 chr10 10575809 10575908 -135013380 + MER20B DNA MER1_type 63 170 -613 22 0 0 0 chr10 10576035 10576057 -135013231 + AT_rich Low_complexity Low_complexity 1 22 0 4705 62 6 4 chr10 10576080 10576770 -135012518 + L1PA7 LINE L1 5213 5904 -250 950 130 56 0 chr10 10576770 10576931 -135012357 - LTR12 LTR ERV1 0 714 545 7331 114 18 22 chr10 10576944 10579029 -135010259 - HERV9 LTR ERV1 -6180 2219 59 732 122 47 74 chr10 10579008 10579156 -135010132 - pTR5 LTR ERV1 -1994 444 301 * 321 263 10 0 chr10 10579156 10579255 -135010033 - LTR30 LTR ERV1 -79 643 544 1370 103 205 6 chr10 10579255 10579624 -135009664 - LTR12 LTR ERV1 -417 2021 57 247 196 0 0 chr10 10579624 10579675 -135009613 - LTR30 LTR ERV1 -670 52 2 1754 106 0 4 chr10 10579676 10579930 -135009358 + L1PA7 LINE L1 5901 6153 -1 440 206 7 0 chr10 10581897 10582033 -135007255 + (TG)n Simple_repeat Simple_repeat 2 138 0 535 196 12 0 chr10 10582055 10582228 -135007060 + (TG)n Simple_repeat Simple_repeat 2 176 0 310 208 0 0 chr10 10582400 10582472 -135006816 + FLAM SINE Alu 40 111 -22 180 0 0 0 chr10 10582481 10582501 -135006787 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 282 293 50 45 chr10 10582537 10582896 -135006392 - L1MEd LINE L1 -4866 1253 893 1744 132 70 59 chr10 10583446 10583748 -135005540 + THE1C LTR MaLR 1 310 -65 2021 133 0 0 chr10 10583748 10584065 -135005223 + AluSc SINE Alu 1 317 0 1744 132 70 59 chr10 10584065 10584132 -135005156 + THE1C LTR MaLR 310 375 0 234 286 29 0 chr10 10585194 10585299 -135003989 + (TA)n Simple_repeat Simple_repeat 2 109 0 1365 229 8 24 chr10 10585299 10585671 -135003617 + MLT1A2 LTR MaLR 9 374 0 310 332 126 5 chr10 10586290 10586480 -135002808 + MIR SINE MIR 1 213 -49 460 283 28 90 chr10 10586685 10586862 -135002426 + MIR SINE MIR 59 224 -38 24 32 0 0 chr10 10587448 10587479 -135001809 + AT_rich Low_complexity Low_complexity 1 31 0 482 339 36 39 chr10 10589615 10590028 -134999260 + ERVL LTR ERVL 1005 1416 -4348 573 358 42 26 chr10 10590029 10590415 -134998873 + ERVL LTR ERVL 1817 2208 -3556 483 252 71 59 chr10 10590713 10590951 -134998337 + Charlie2a DNA MER1_type 727 967 -1895 28 29 0 0 chr10 10591214 10591249 -134998039 + AT_rich Low_complexity Low_complexity 1 35 0 279 337 107 16 chr10 10591548 10591735 -134997553 - MIR SINE MIR -27 235 32 426 202 0 0 chr10 10592865 10592949 -134996339 - L1MC3 LINE L1 -26 7759 7676 551 109 33 11 chr10 10592954 10593046 -134996242 + MER4A LTR ERV1 5 98 -566 1707 139 157 80 chr10 10593046 10593421 -134995867 + MER4A LTR ERV1 261 664 0 2826 188 18 4 chr10 10593422 10593966 -134995322 - L1MC3 LINE L1 -107 7678 7127 250 122 0 0 chr10 10593968 10594009 -134995279 + 5S rRNA rRNA 2 42 -79 315 73 0 0 chr10 10594024 10594065 -134995223 + 5S rRNA rRNA 2 42 -79 525 187 47 33 chr10 10594066 10594216 -134995072 - L1MC3 LINE L1 -647 7138 6987 797 199 126 16 chr10 10594337 10594528 -134994760 - MLT1A2 LTR MaLR -162 212 1 468 315 59 33 chr10 10594802 10595192 -134994096 - L1M4 LINE L1 -3443 2703 2304 22 0 0 0 chr10 10595368 10595390 -134993898 + AT_rich Low_complexity Low_complexity 1 22 0 229 272 49 37 chr10 10596870 10596951 -134992337 + L2 LINE L2 3191 3272 0 1827 143 0 4 chr10 10596954 10597213 -134992075 + AluSx SINE Alu 24 281 -31 309 51 0 0 chr10 10597216 10597255 -134992033 + (CA)n Simple_repeat Simple_repeat 2 40 0 276 284 42 30 chr10 10597598 10597774 -134991514 + MLT1J2 LTR MaLR 263 436 -10 1976 174 20 15 chr10 10597853 10598262 -134991026 + L1MC1 LINE L1 5922 6332 -1 220 349 54 49 chr10 10598638 10598940 -134990348 + L2 LINE L2 2894 3258 -14 282 269 40 16 chr10 10599517 10599656 -134989632 - MLT1J LTR MaLR 0 511 427 2672 178 26 72 chr10 10599947 10600588 -134988700 + LTR9 LTR ERV1 1 612 0 983 235 49 3 chr10 10600903 10601081 -134988207 - MER33 DNA MER1_type -2265 320 121 2075 137 3 3 chr10 10601081 10601381 -134987907 - AluSq SINE Alu -13 300 1 983 235 49 3 chr10 10601381 10601508 -134987780 - MER33 DNA MER1_type -2464 121 1 280 259 26 129 chr10 10652201 10652317 -134936971 + MER5A DNA MER1_type 10 113 -76 217 240 21 94 chr10 10652864 10652960 -134936328 + MIR SINE MIR 104 192 -70 1805 159 0 7 chr10 10654326 10654643 -134934645 - AluSx SINE Alu 0 315 1 2229 109 0 0 chr10 10655269 10655573 -134933715 - AluSq SINE Alu -9 304 1 1926 52 4 0 chr10 10655695 10655975 -134933313 - AluY SINE Alu 0 333 53 206 62 31 0 chr10 10657575 10657607 -134931681 + (GA)n Simple_repeat Simple_repeat 2 34 0 1535 209 31 14 chr10 10658325 10658684 -134930604 + MLT1A1 LTR MaLR 1 365 0 21 0 0 0 chr10 10659173 10659194 -134930094 + AT_rich Low_complexity Low_complexity 1 21 0 2200 129 3 0 chr10 10659242 10659545 -134929743 - AluSx SINE Alu -8 304 1 329 307 33 36 chr10 10659801 10660104 -134929184 + L1ME LINE L1 5484 5785 -336 32 67 0 0 chr10 10660129 10660189 -134929099 + AT_rich Low_complexity Low_complexity 1 60 0 908 177 135 30 chr10 10660783 10661049 -134928239 + MER58B DNA MER1_type 46 339 -2 1785 168 93 72 chr10 10661203 10661620 -134927668 - MSTB LTR MaLR 0 426 1 720 308 14 0 chr10 10661635 10661843 -134927445 + MIR SINE MIR 52 262 0 2090 96 3 48 chr10 10662303 10662641 -134926647 + AluSg SINE Alu 1 325 0 229 270 34 0 chr10 10663067 10663156 -134926132 + L2 LINE L2 3004 3095 -177 5141 143 19 11 chr10 10663316 10664247 -134925041 + L1MA5 LINE L1 5357 6295 -5 22 35 0 0 chr10 10664313 10664342 -134924946 + AT_rich Low_complexity Low_complexity 1 29 0 270 0 0 0 chr10 10664371 10664401 -134924887 + (TG)n Simple_repeat Simple_repeat 1 60 0 270 0 0 0 chr10 10664401 10664431 -134924857 + (TG)n Simple_repeat Simple_repeat 2 31 0 928 259 169 25 chr10 10664532 10665307 -134923981 + L1ME1 LINE L1 3814 4700 -1446 2754 222 42 47 chr10 10665307 10666205 -134923083 + L1ME1 LINE L1 5254 6147 -19 204 200 21 42 chr10 10668756 10668851 -134920437 + T-rich Low_complexity Low_complexity 3 95 0 738 352 25 22 chr10 10669048 10669644 -134919644 - HERV16 LTR ERVL -423 5341 4744 322 284 133 34 chr10 10670014 10670278 -134919010 - HERV16 LTR ERVL -1442 4212 3923 352 346 19 0 chr10 10670553 10670715 -134918573 - HERV16 LTR ERVL -1950 3535 3371 543 120 0 0 chr10 10670824 10670899 -134918389 + AluSg/x SINE Alu 217 291 -21 238 268 18 0 chr10 10671000 10671056 -134918232 + (TGGA)n Simple_repeat Simple_repeat 1 57 0 1432 172 18 11 chr10 10671062 10671397 -134917891 - MLT2C2 LTR ERVL -52 345 5 382 339 19 26 chr10 10671510 10671906 -134917382 - HERV16 LTR ERVL -3128 1868 1524 857 196 6 11 chr10 10672807 10672986 -134916302 + MER5B DNA MER1_type 1 178 0 681 224 86 11 chr10 10672994 10673168 -134916120 - MER5A DNA MER1_type -1 188 2 2068 147 33 25 chr10 10673767 10674128 -134915160 - THE1B LTR MaLR 0 364 1 354 45 0 0 chr10 10674270 10674314 -134914974 + (TTGG)n Simple_repeat Simple_repeat 2 45 0 1601 252 73 8 chr10 10674546 10675026 -134914262 + LTR40a LTR ERVL 1 511 -8 357 344 18 27 chr10 10675029 10675250 -134914038 + L1MC4a LINE L1 5664 5882 -1926 736 288 63 34 chr10 10675473 10675855 -134913433 + MLT1J LTR MaLR 75 467 -44 662 284 62 27 chr10 10676890 10677228 -134912060 + MLT1C LTR MaLR 118 467 0 268 254 84 0 chr10 10677228 10677299 -134911989 - MIR SINE MIR -81 181 105 242 329 0 0 chr10 10678295 10678374 -134910914 - MIR SINE MIR -10 252 174 817 246 83 49 chr10 10678384 10678831 -134910457 + MLT1C LTR MaLR 6 467 0 533 268 37 37 chr10 10678831 10678995 -134910293 - MIR SINE MIR -92 170 7 1125 211 132 6 chr10 10679748 10680047 -134909241 + MER63B DNA MER1_type 1 261 -801 5057 91 21 101 chr10 10680047 10680448 -134908840 - L1MA2 LINE L1 0 6304 5872 2132 141 0 0 chr10 10680448 10680747 -134908541 - AluSx SINE Alu -13 299 1 5057 91 21 101 chr10 10680747 10681273 -134908015 - L1MA2 LINE L1 -432 5872 5454 2127 126 16 10 chr10 10681273 10681583 -134907705 - AluSx SINE Alu 0 312 1 5057 91 21 101 chr10 10681583 10681611 -134907677 - L1MA2 LINE L1 -850 5454 5425 1125 211 132 6 chr10 10681611 10681653 -134907635 + MER63B DNA MER1_type 261 385 -51 303 125 0 150 chr10 10682280 10682324 -134906964 - MER73 LTR ERVL 0 644 616 2372 82 0 3 chr10 10682324 10682628 -134906660 - AluSx SINE Alu -9 303 1 303 125 0 150 chr10 10682628 10682663 -134906625 - MER73 LTR ERVL -28 616 577 1432 205 121 3 chr10 10682763 10683153 -134906135 - MER73 LTR ERVL -208 436 1 214 361 89 24 chr10 10683486 10683655 -134905633 - L2 LINE L2 -4 3268 3089 2161 125 3 0 chr10 10683773 10684076 -134905212 - AluSp SINE Alu -9 304 1 288 299 60 54 chr10 10684080 10684247 -134905041 - L2 LINE L2 -597 2717 2550 370 275 81 23 chr10 10684533 10684732 -134904556 + LTR16B LTR ERVL 266 450 0 453 217 70 26 chr10 10685284 10685399 -134903889 + MIR SINE MIR 106 225 -37 399 216 0 0 chr10 10685468 10685579 -134903709 + GA-rich Low_complexity Low_complexity 1 111 0 2460 190 91 12 chr10 10685883 10686446 -134902842 + MER21B LTR ERV1 1 607 -256 1397 210 7 3 chr10 10686559 10686849 -134902439 + MER21B LTR ERV1 572 862 -1 3946 32 2 0 chr10 10686854 10687327 -134901961 + L1PA4 LINE L1 5681 6154 -1 1142 89 0 0 chr10 10687395 10687541 -134901747 - AluSg/x SINE Alu -6 306 161 287 278 62 10 chr10 10688609 10688706 -134900582 - L3 LINE CR1 -94 1483 1382 789 216 13 0 chr10 10688807 10688960 -134900328 + FRAM SINE Alu 1 155 -11 746 22 0 0 chr10 10690149 10690240 -134899048 + L1PA2 LINE L1 6064 6154 -1 224 30 30 0 chr10 10690533 10690566 -134898722 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 21 0 0 0 chr10 10690748 10690769 -134898519 + AT_rich Low_complexity Low_complexity 1 21 0 880 264 74 89 chr10 10690821 10691336 -134897952 + L2 LINE L2 1419 1925 -1389 243 293 24 0 chr10 10691569 10691651 -134897637 + L2 LINE L2 1616 1699 -1615 360 289 73 37 chr10 10691739 10691957 -134897331 + LTR16A LTR ERVL 72 297 -153 696 296 98 17 chr10 10692057 10692526 -134896762 + L1M4 LINE L1 3652 4158 -1988 752 158 0 17 chr10 10692566 10692686 -134896602 + FLAM_C SINE Alu 2 119 -14 1480 300 93 24 chr10 10692880 10693416 -134895872 + L1M4 LINE L1 4263 4761 -1385 342 67 0 0 chr10 10693416 10693461 -134895827 + (CA)n Simple_repeat Simple_repeat 2 46 0 1480 300 93 24 chr10 10693461 10693814 -134895474 + L1M4 LINE L1 4761 5237 -909 2410 230 66 13 chr10 10693814 10694432 -134894856 - MER82 DNA MER2_type 0 653 3 1480 300 93 24 chr10 10694432 10694587 -134894701 + L1M4 LINE L1 5237 5380 -766 2344 130 8 6 chr10 10695425 10695787 -134893501 + THE1B LTR MaLR 1 363 -1 267 234 96 32 chr10 10697850 10697944 -134891344 + L2 LINE L2 3209 3308 -5 2007 158 68 23 chr10 10698572 10699001 -134890287 - L1MA8 LINE L1 -18 6273 5826 1728 170 0 25 chr10 10699009 10699286 -134890002 + AluJb SINE Alu 9 278 -34 433 119 0 0 chr10 10699286 10699345 -134889943 + Alu SINE Alu 235 293 -19 2028 62 0 0 chr10 10699376 10699616 -134889672 - AluY SINE Alu -30 281 42 2427 155 69 12 chr10 10699646 10700379 -134888909 - L1MA8 LINE L1 -492 5808 5033 1199 171 9 22 chr10 10701607 10701835 -134887453 + AluJo SINE Alu 68 292 -20 1710 169 52 86 chr10 10702468 10702701 -134886587 - MSTA LTR MaLR 0 428 216 1875 110 0 0 chr10 10702701 10702955 -134886333 - AluSx SINE Alu -19 293 40 1710 169 52 86 chr10 10702955 10703164 -134886124 - MSTA LTR MaLR -212 216 1 23 0 0 0 chr10 10703672 10703695 -134885593 + AT_rich Low_complexity Low_complexity 1 23 0 204 398 10 10 chr10 10704607 10704705 -134884583 - MIR3 SINE MIR -54 154 57 258 343 128 42 chr10 10704833 10704952 -134884336 - L2 LINE L2 -644 2670 2563 750 206 103 49 chr10 10704952 10705175 -134884113 - MER46A DNA MER2_type -1 235 1 258 343 128 42 chr10 10705175 10705367 -134883921 - L2 LINE L2 -751 2563 2332 2192 119 3 3 chr10 10706603 10706905 -134882383 - AluSc SINE Alu -7 302 1 2433 106 0 14 chr10 10707599 10707966 -134881322 - L1PB1 LINE L1 -1 6150 5789 1531 143 15 11 chr10 10707966 10708239 -134881049 - L1PB1 LINE L1 -605 5546 5273 869 254 4 48 chr10 10708346 10708574 -134880714 - MER58A DNA MER1_type -6 218 1 1610 258 39 33 chr10 10708693 10709208 -134880080 - LTR40a LTR ERVL 0 519 2 1370 192 51 7 chr10 10710318 10710594 -134878694 + AluJo SINE Alu 8 295 -17 384 216 88 0 chr10 10710636 10710738 -134878550 - L1MA4A LINE L1 -6 6297 6187 4223 155 47 4 chr10 10713195 10713938 -134875350 + L1PA15 LINE L1 5391 6165 0 2466 75 13 0 chr10 10714206 10714512 -134874776 - AluY SINE Alu -1 310 1 24 0 0 0 chr10 10714561 10714585 -134874703 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr10 10714848 10714870 -134874418 + AT_rich Low_complexity Low_complexity 1 22 0 264 309 87 0 chr10 10715883 10716009 -134873279 - MIR SINE MIR -74 188 52 238 301 27 0 chr10 10718109 10718202 -134871086 - MIR3 SINE MIR -24 184 87 2283 51 3 0 chr10 10718738 10719032 -134870256 + L1PA5 LINE L1 5860 6154 0 429 289 134 34 chr10 10719057 10719296 -134869992 + MLT1J2 LTR MaLR 188 450 0 1587 209 112 5 chr10 10721268 10721704 -134867584 + L1MA9 LINE L1 5792 6274 -38 419 223 43 17 chr10 10721744 10721861 -134867427 + AluJ/FLAM SINE Alu 2 101 -201 279 275 21 49 chr10 10722384 10722526 -134866762 - L1MC4a LINE L1 -1853 5955 5818 555 284 33 0 chr10 10722608 10722791 -134866497 - L1ME3A LINE L1 -61 6109 5921 2519 60 0 0 chr10 10722793 10723093 -134866195 + AluY SINE Alu 1 300 -11 262 215 0 31 chr10 10723148 10723213 -134866075 - MLT1I LTR MaLR -16 574 512 432 272 40 25 chr10 10723361 10723679 -134865609 - MLT1I LTR MaLR -43 366 6 948 330 81 34 chr10 10723889 10724508 -134864780 + ERVL LTR ERVL 2618 3265 -2389 358 397 22 24 chr10 10724580 10725116 -134864172 + ERVL LTR ERVL 3422 3956 -1808 585 362 60 29 chr10 10725165 10725660 -134863628 + ERVL LTR ERVL 4011 4562 -984 578 267 122 30 chr10 10725672 10726147 -134863141 - L1M4 LINE L1 -1305 4841 4323 2033 47 0 4 chr10 10726157 10726415 -134862873 + L1PA4 LINE L1 5897 6153 -2 253 316 116 11 chr10 10726504 10726779 -134862509 - L1M4 LINE L1 -2499 3647 3344 219 69 0 0 chr10 10726840 10726869 -134862419 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2157 104 3 0 chr10 10726872 10727160 -134862128 - AluSp SINE Alu -24 289 1 388 321 56 20 chr10 10728161 10728410 -134860878 - L1M4 LINE L1 -3642 2504 2247 343 304 171 6 chr10 10728562 10728743 -134860545 + MIR SINE MIR 3 213 -49 30 45 0 0 chr10 10728807 10728851 -134860437 + AT_rich Low_complexity Low_complexity 1 44 0 1141 263 116 28 chr10 10729270 10729779 -134859509 - L1ME2 LINE L1 -24 6209 5656 373 281 137 47 chr10 10729761 10730206 -134859082 - L1ME2 LINE L1 -2420 3795 3311 * 1283 248 44 33 chr10 10730197 10730695 -134858593 - L1ME2 LINE L1 -3375 2840 2349 3150 178 38 31 chr10 10730695 10730786 -134858502 - L1MA4 LINE L1 -3 6297 6208 2300 92 3 0 chr10 10730786 10731081 -134858207 - AluY SINE Alu -15 296 1 3150 178 38 31 chr10 10731081 10731625 -134857663 - L1MA4 LINE L1 -92 6208 5654 216 97 0 0 chr10 10731625 10731656 -134857632 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 3150 178 38 31 chr10 10731656 10731733 -134857555 - L1MA4 LINE L1 -646 5654 5579 1283 248 44 33 chr10 10731733 10731921 -134857367 - L1ME2 LINE L1 -3866 2349 2146 497 294 60 18 chr10 10732340 10732622 -134856666 - L1ME2 LINE L1 -5997 399 106 325 317 139 22 chr10 10733002 10733406 -134855882 - L1M4 LINE L1 -1667 4479 4029 191 291 156 81 chr10 10733562 10733857 -134855431 + L2 LINE L2 2915 3231 -41 248 0 31 0 chr10 10733950 10733982 -134855306 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 2334 87 0 0 chr10 10733984 10734273 -134855015 - AluSq SINE Alu -24 289 1 282 391 16 0 chr10 10734795 10734923 -134854365 + L2 LINE L2 2658 2787 -527 1032 73 0 0 chr10 10735097 10735220 -134854068 - AluSg SINE Alu -187 123 1 1092 194 83 24 chr10 10738671 10738923 -134850365 + AluJo SINE Alu 22 288 -24 213 65 0 0 chr10 10741230 10741261 -134848027 + (T)n Simple_repeat Simple_repeat 1 31 0 300 120 0 0 chr10 10741361 10741411 -134847877 + (T)n Simple_repeat Simple_repeat 1 50 0 198 406 31 8 chr10 10743959 10744087 -134845201 - L2 LINE L2 -4 3268 3138 2738 246 62 45 chr10 10744851 10746578 -134842710 - L1ME1 LINE L1 -41 6059 4300 7544 139 36 5 chr10 10746578 10747841 -134841447 - HSMAR2 DNA Mariner 0 1302 1 2738 246 62 45 chr10 10747841 10748273 -134841015 - L1ME1 LINE L1 -1800 4300 3877 1072 311 33 16 chr10 10748298 10748686 -134840602 - L1ME1 LINE L1 -2383 3697 3298 1339 142 0 45 chr10 10748686 10748932 -134840356 + MER46A DNA MER2_type 1 235 -1 1072 311 33 16 chr10 10748932 10749031 -134840257 - L1ME1 LINE L1 -2782 3298 3202 1436 246 116 69 chr10 10749056 10749622 -134839666 - MLT1E2 LTR MaLR -2 622 4 859 268 102 9 chr10 10749628 10750043 -134839245 - L1ME1 LINE L1 -3076 3004 2492 216 0 0 0 chr10 10750043 10750067 -134839221 + (TTTTG)n Simple_repeat Simple_repeat 1 24 0 859 268 102 9 chr10 10750067 10750275 -134839013 - L1ME1 LINE L1 -3588 2492 2305 374 249 190 32 chr10 10750280 10750501 -134838787 - L1ME1 LINE L1 -4341 1920 1665 1048 280 77 45 chr10 10750546 10751726 -134837562 - L1ME1 LINE L1 -4565 1515 311 1764 211 51 16 chr10 10751803 10752254 -134837034 + MLT1C LTR MaLR 1 467 0 207 358 9 46 chr10 10752503 10752612 -134836676 - MIR SINE MIR -81 127 23 348 302 47 23 chr10 10752776 10752905 -134836383 - L2 LINE L2 -238 3075 2944 950 153 12 24 chr10 10752922 10753092 -134836196 + BC200 scRNA scRNA 1 168 -32 686 208 159 23 chr10 10753163 10753414 -134835874 - MER58B DNA MER1_type 0 341 50 425 343 117 8 chr10 10753466 10753714 -134835574 - L2 LINE L2 -545 2769 2495 427 269 17 47 chr10 10756406 10756588 -134832700 + MER58C DNA MER1_type 38 212 -3 2247 114 0 0 chr10 10757932 10758230 -134831058 - AluSg SINE Alu -12 298 1 409 353 131 5 chr10 10758399 10758620 -134830668 + MIR SINE MIR 14 262 0 268 111 0 0 chr10 10758731 10758767 -134830521 + U2 snRNA snRNA 1 36 -152 198 376 24 0 chr10 10759292 10759377 -134829911 + MER5B DNA MER1_type 92 178 0 1052 128 0 0 chr10 10759687 10759828 -134829460 + AluSq SINE Alu 144 284 -29 244 318 255 21 chr10 10759880 10760166 -134829122 + L2 LINE L2 2961 3313 0 368 264 35 28 chr10 10761195 10761339 -134827949 + MER103 DNA DNA 7 151 -15 1966 208 37 52 chr10 10761371 10761936 -134827352 + MER74A LTR ERVL 1 619 -3 312 273 149 46 chr10 10761993 10762187 -134827101 + MIR SINE MIR 20 233 -29 614 149 0 40 chr10 10762630 10762805 -134826483 + (TC)n Simple_repeat Simple_repeat 1 168 0 2048 120 0 0 chr10 10762948 10763222 -134826066 - AluSx SINE Alu -38 274 1 1108 162 29 54 chr10 10765104 10765345 -134823943 - MER46A DNA MER2_type 0 236 2 386 344 58 11 chr10 10766895 10767084 -134822204 + MIR SINE MIR 36 233 -29 282 248 218 0 chr10 10767131 10767232 -134822056 - MIR SINE MIR -50 212 90 1082 38 0 0 chr10 10770935 10771066 -134818222 + L1PA5 LINE L1 6013 6143 -11 3079 152 42 17 chr10 10771099 10771327 -134817961 + L1MB3 LINE L1 5571 5792 -391 2069 132 36 41 chr10 10771327 10771692 -134817596 + THE1B LTR MaLR 1 363 -1 3079 152 42 17 chr10 10771692 10772061 -134817227 + L1MB3 LINE L1 5792 6183 0 2233 123 0 0 chr10 10772123 10772433 -134816855 - AluSx SINE Alu -2 310 1 255 125 54 0 chr10 10773606 10773662 -134815626 + AluS SINE Alu 14 72 -229 552 306 61 45 chr10 10773845 10774224 -134815064 - L2 LINE L2 -638 2676 2292 1967 131 31 0 chr10 10775012 10775303 -134813985 - AluSx SINE Alu -12 300 1 2084 120 0 0 chr10 10775541 10775815 -134813473 + AluSg SINE Alu 1 274 -36 4385 180 53 15 chr10 10776149 10776274 -134813014 - L1MD1 LINE L1 0 6636 6517 2292 113 48 17 chr10 10776274 10776627 -134812661 + THE1B LTR MaLR 1 364 0 4385 180 53 15 chr10 10776627 10777451 -134811837 - L1MD1 LINE L1 -119 6517 5651 6558 233 71 34 chr10 10777488 10782036 -134807252 - L1MD1 LINE L1 -1744 4796 1 345 62 0 0 chr10 10782212 10782260 -134807028 + (TG)n Simple_repeat Simple_repeat 2 49 0 2061 118 54 0 chr10 10782621 10782917 -134806371 - AluSx SINE Alu 0 312 1 312 27 0 0 chr10 10784616 10784653 -134804635 + (TG)n Simple_repeat Simple_repeat 2 38 0 2023 80 95 0 chr10 10784656 10784919 -134804369 - AluSg1 SINE Alu -21 288 1 1407 232 71 12 chr10 10785231 10785567 -134803721 + MLT1A1 LTR MaLR 10 365 0 195 42 0 0 chr10 10786481 10786505 -134802783 + (TTCA)n Simple_repeat Simple_repeat 4 27 0 937 305 94 12 chr10 10786505 10787061 -134802227 - L2 LINE L2 -14 3299 2698 199 158 18 18 chr10 10787061 10787073 -134802215 + (TA)n Simple_repeat Simple_repeat 1 12 -45 2022 137 0 10 chr10 10787073 10787380 -134801908 + AluSx SINE Alu 1 304 -8 199 158 18 18 chr10 10787380 10787424 -134801864 + (TA)n Simple_repeat Simple_repeat 11 57 0 636 250 107 14 chr10 10787554 10787770 -134801518 + MIR SINE MIR 2 237 -25 1920 112 3 31 chr10 10788407 10788701 -134800587 - AluSx SINE Alu -24 288 3 21 0 0 0 chr10 10791446 10791467 -134797821 + AT_rich Low_complexity Low_complexity 1 21 0 240 286 163 0 chr10 10791721 10791798 -134797490 + MIR SINE MIR 59 157 -105 640 190 52 17 chr10 10791798 10791972 -134797316 + MER104 DNA MER2_type 1 180 0 240 286 163 0 chr10 10791972 10791992 -134797296 + MIR SINE MIR 157 172 -90 211 286 0 0 chr10 10793296 10793338 -134795950 - MIR SINE MIR -206 56 15 245 302 34 23 chr10 10794359 10794489 -134794799 + MIR SINE MIR 11 144 -118 309 261 101 34 chr10 10797912 10798031 -134791257 - MER117 DNA MER1_type 0 197 71 2076 140 0 10 chr10 10798428 10798721 -134790567 - AluSq SINE Alu -23 290 1 218 315 167 9 chr10 10799514 10799622 -134789666 - L2 LINE L2 0 3272 3148 4265 176 48 23 chr10 10800875 10801119 -134788169 - L1MA7 LINE L1 -25 6266 6030 1126 142 117 0 chr10 10801119 10801324 -134787964 - MER30 DNA MER1_type 0 230 2 4265 176 48 23 chr10 10801324 10801965 -134787323 - L1MA7 LINE L1 -261 6030 5358 2122 121 0 17 chr10 10803017 10803314 -134785974 + AluSx SINE Alu 7 298 -14 203 348 33 11 chr10 10803830 10803922 -134785366 - MIR SINE MIR -90 118 25 198 0 0 0 chr10 10804009 10804031 -134785257 + (TG)n Simple_repeat Simple_repeat 1 22 0 2209 121 3 0 chr10 10805363 10805669 -134783619 + AluSg SINE Alu 1 307 -3 3437 139 38 0 chr10 10806010 10806544 -134782744 - MER41C LTR ERV1 0 554 1 217 106 43 43 chr10 10807273 10807320 -134781968 + MER5A DNA MER1_type 125 171 -18 219 324 45 36 chr10 10809499 10809610 -134779678 + MIR3 SINE MIR 5 116 -92 183 315 158 59 chr10 10809692 10810511 -134778777 - L2 LINE L2 -943 2371 1472 2001 236 19 49 chr10 10811017 10811395 -134777893 - LTR53 LTR ERVL 0 519 160 2313 87 0 13 chr10 10811395 10811704 -134777584 + AluSg1 SINE Alu 1 305 -4 2001 236 19 49 chr10 10811704 10811860 -134777428 - LTR53 LTR ERVL -359 160 1 2338 102 0 0 chr10 10811980 10812273 -134777015 - AluSc SINE Alu -14 295 3 582 221 206 51 chr10 10812647 10812971 -134776317 - LTR50 LTR ERVL -10 785 512 225 0 0 0 chr10 10812971 10812996 -134776292 + (CTG)n Simple_repeat Simple_repeat 2 26 0 582 221 206 51 chr10 10812996 10813275 -134776013 - LTR50 LTR ERVL -283 512 1 1560 290 49 38 chr10 10813373 10814025 -134775263 - MER115 DNA AcHobo 0 693 35 847 277 58 27 chr10 10814054 10814382 -134774906 - LTR33 LTR ERVL -183 338 1 575 80 0 0 chr10 10816864 10816939 -134772349 + AluY SINE Alu 5 79 -231 2061 71 0 8 chr10 10816964 10817218 -134772070 + AluY SINE Alu 48 299 -12 4484 118 9 2 chr10 10817265 10817895 -134771393 - MER41B LTR ERV1 0 635 1 503 291 81 14 chr10 10818104 10818314 -134770974 - MIR SINE MIR -34 228 5 2140 188 36 81 chr10 10818345 10818929 -134770359 - MER89 LTR ERV1 -1 558 1 353 123 0 4 chr10 10819522 10819740 -134769548 + AluSq SINE Alu 1 306 0 197 315 82 0 chr10 10820346 10820419 -134768869 + MIR SINE MIR 47 125 -83 201 167 0 24 chr10 10821625 10821667 -134767621 + (CA)n Simple_repeat Simple_repeat 2 42 0 2181 118 0 0 chr10 10822782 10823071 -134766217 + AluSx SINE Alu 1 289 -23 183 42 0 0 chr10 10823627 10823651 -134765637 + (GA)n Simple_repeat Simple_repeat 2 25 0 * 342 0 0 0 chr10 10823650 10823688 -134765600 + (TG)n Simple_repeat Simple_repeat 2 39 0 514 289 12 12 chr10 10824026 10824199 -134765089 + MIR3 SINE MIR 20 192 -16 316 327 19 0 chr10 10824985 10825092 -134764196 + MIR SINE MIR 53 161 -101 2110 159 31 29 chr10 10825113 10825233 -134764055 - MLT1B LTR MaLR -3 387 269 2278 120 0 0 chr10 10825233 10825541 -134763747 - AluSx SINE Alu -4 308 1 2110 159 31 29 chr10 10825541 10825804 -134763484 - MLT1B LTR MaLR -121 269 3 235 250 62 70 chr10 10825808 10825936 -134763352 - LTR16A LTR ERVL -10 440 314 2607 131 20 43 chr10 10825948 10826352 -134762936 - Tigger2a DNA MER2_type -2274 434 39 2793 150 16 30 chr10 10826352 10826659 -134762629 - LTR45B LTR ERV1 0 489 190 2398 84 3 0 chr10 10826659 10826955 -134762333 - AluSp SINE Alu -16 297 1 2793 150 16 30 chr10 10826955 10827139 -134762149 - LTR45B LTR ERV1 -299 190 5 2607 131 20 43 chr10 10827139 10827178 -134762110 - Tigger2a DNA MER2_type -2669 39 1 490 278 111 48 chr10 10827178 10827446 -134761842 - LTR16A LTR ERVL -147 303 19 1398 186 26 89 chr10 10828759 10828977 -134760311 - MLT1A2 LTR MaLR -16 358 173 2094 109 63 29 chr10 10828977 10829327 -134759961 - THE1B LTR MaLR 0 364 3 1398 186 26 89 chr10 10829327 10829490 -134759798 - MLT1A2 LTR MaLR -201 173 1 202 192 39 0 chr10 10829501 10829553 -134759735 + (CAGAGA)n Simple_repeat Simple_repeat 4 57 0 397 299 119 44 chr10 10829581 10830196 -134759092 - L2 LINE L2 -223 3090 2425 584 269 218 18 chr10 10830322 10830716 -134758572 + LTR33A LTR ERVL 2 474 -49 207 184 0 0 chr10 10831679 10831717 -134757571 + (CA)n Simple_repeat Simple_repeat 2 39 0 17461 34 1 1 chr10 10831993 10834826 -134754462 - L1PA2 LINE L1 -4 6151 3319 901 171 124 16 chr10 10834826 10835083 -134754205 + MER33 DNA MER1_type 30 314 -10 388 290 183 0 chr10 10835259 10835438 -134753850 + MIR SINE MIR 31 244 -18 4047 119 17 12 chr10 10836488 10837128 -134752160 + L1PB1 LINE L1 5506 6148 -3 518 254 141 39 chr10 10837356 10837612 -134751676 - L2 LINE L2 -1 3312 3031 386 200 14 0 chr10 10837612 10837682 -134751606 - AluS SINE Alu -237 71 1 390 287 125 23 chr10 10838320 10838536 -134750752 - MIR SINE MIR -2 260 23 262 234 0 16 chr10 10838661 10838725 -134750563 + CT-rich Low_complexity Low_complexity 1 63 0 750 131 0 0 chr10 10839287 10839394 -134749894 + AluSq/x SINE Alu 3 109 -203 528 70 0 0 chr10 10839494 10839565 -134749723 - Alu SINE Alu -238 72 2 2421 53 0 50 chr10 10839566 10839887 -134749401 - AluY SINE Alu -6 305 1 463 191 11 11 chr10 10839943 10840037 -134749251 - MER58A DNA MER1_type 0 224 131 928 66 0 59 chr10 10840037 10840173 -134749115 - AluSg/x SINE Alu -10 302 175 371 182 0 0 chr10 10840193 10840255 -134749033 - AluSp SINE Alu -104 199 138 701 220 38 0 chr10 10840255 10840387 -134748901 - MER58A DNA MER1_type 0 141 5 227 377 49 0 chr10 10841151 10841193 -134748095 - L2 LINE L2 -9 3263 3225 2398 208 28 73 chr10 10841193 10841834 -134747454 + LTR9 LTR ERV1 1 612 0 227 377 49 0 chr10 10841834 10841913 -134747375 - L2 LINE L2 -47 3225 3136 329 328 140 29 chr10 10842111 10842553 -134746735 - L2 LINE L2 -367 2947 2457 216 349 0 0 chr10 10842987 10843073 -134746215 + L2 LINE L2 2652 2737 -577 360 270 178 11 chr10 10843073 10843258 -134746030 + MIR SINE MIR 47 262 0 1223 142 0 0 chr10 10843455 10843624 -134745664 + AluJo SINE Alu 5 173 -139 871 161 0 22 chr10 10843626 10843763 -134745525 + AluJo/FRAM SINE Alu 142 275 -37 225 0 0 0 chr10 10843763 10843788 -134745500 + (TC)n Simple_repeat Simple_repeat 1 25 0 * 384 22 0 0 chr10 10843787 10843832 -134745456 + (CA)n Simple_repeat Simple_repeat 1 45 0 333 0 0 0 chr10 10844175 10844212 -134745076 + (CA)n Simple_repeat Simple_repeat 1 37 0 2722 219 28 40 chr10 10844260 10844611 -134744677 + MER82 DNA MER2_type 2 343 -310 2209 125 146 11 chr10 10844611 10844988 -134744300 - MSTA LTR MaLR 0 428 1 2722 219 28 40 chr10 10844988 10845290 -134743998 + MER82 DNA MER2_type 343 647 -6 197 282 59 106 chr10 10851220 10851390 -134737898 + MIR3 SINE MIR 9 170 -38 288 0 0 0 chr10 10852346 10852378 -134736910 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1656 133 12 8 chr10 10852381 10852621 -134736667 - AluSq SINE Alu -33 280 40 554 104 0 0 chr10 10852622 10852699 -134736589 - AluJ/FLAM SINE Alu -235 77 1 23 54 0 0 chr10 10853745 10853782 -134735506 + AT_rich Low_complexity Low_complexity 1 37 0 24 0 0 0 chr10 10854079 10854103 -134735185 + AT_rich Low_complexity Low_complexity 1 24 0 4028 77 2 0 chr10 10855077 10855610 -134733678 - L1PA10 LINE L1 -16 6152 5619 1727 172 10 3 chr10 10856283 10856579 -134732709 - AluSq SINE Alu -13 300 3 267 31 0 0 chr10 10856697 10856729 -134732559 + (TG)n Simple_repeat Simple_repeat 2 33 0 22 35 0 0 chr10 10857802 10857831 -134731457 + AT_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr10 10857870 10857895 -134731393 + AT_rich Low_complexity Low_complexity 1 25 0 3694 65 18 0 chr10 10858289 10858779 -134730509 + L1PA10 LINE L1 5670 6168 0 744 275 35 5 chr10 10859558 10859758 -134729530 + MIR SINE MIR 30 235 -27 2529 68 0 0 chr10 10860519 10860828 -134728460 + AluY SINE Alu 1 309 -2 491 371 33 4 chr10 10861122 10861367 -134727921 - MIR SINE MIR -10 252 1 2262 82 30 0 chr10 10861498 10861801 -134727487 + AluSx SINE Alu 1 312 0 27 29 0 0 chr10 10862618 10862652 -134726636 + AT_rich Low_complexity Low_complexity 1 34 0 793 156 87 50 chr10 10864420 10864638 -134724650 - MER66A LTR ERV1 0 478 253 1330 152 0 5 chr10 10864641 10864839 -134724449 - AluSg/x SINE Alu -17 295 99 1297 224 0 8 chr10 10864839 10865107 -134724181 - MER66B LTR ERV1 -220 266 1 385 366 54 16 chr10 10866197 10866514 -134722774 + L2 LINE L2 2323 2651 -663 620 303 0 27 chr10 10866597 10866782 -134722506 - MIR SINE MIR -52 210 31 283 278 14 0 chr10 10867113 10867185 -134722103 + MLT1H LTR MaLR 228 300 -249 423 183 86 0 chr10 10867280 10867373 -134721915 + MLT1H LTR MaLR 446 546 -3 366 269 93 116 chr10 10867380 10867829 -134721459 + L2 LINE L2 2832 3270 -2 449 295 137 30 chr10 10868950 10869615 -134719673 - L1ME4a LINE L1 -2 6119 5384 217 326 31 10 chr10 10869773 10869871 -134719417 - MER5B DNA MER1_type -78 100 1 331 320 20 48 chr10 10870683 10870830 -134718458 + MIR3 SINE MIR 4 146 -62 188 315 22 22 chr10 10870880 10870972 -134718316 + MIR SINE MIR 60 151 -111 2996 137 79 57 chr10 10871019 10871616 -134717672 + MER4B LTR ERV1 1 610 0 208 309 12 12 chr10 10872143 10872224 -134717064 - MIR SINE MIR -84 124 44 420 257 51 25 chr10 10873686 10873839 -134715449 - MER5A DNA MER1_type -3 175 5 318 321 93 21 chr10 10873704 10873844 -134715444 + MER5A DNA MER1_type 40 189 0 * 198 288 34 34 chr10 10875460 10875519 -134713769 + L3b LINE CR1 1514 1572 -11 726 217 35 25 chr10 10875629 10875832 -134713456 - MER3 DNA MER1_type 0 209 5 196 329 27 14 chr10 10875868 10875941 -134713347 - MER5A DNA MER1_type -112 77 4 2687 128 12 2 chr10 10875945 10876375 -134712913 + MER57B LTR ERV1 1 434 0 292 359 77 21 chr10 10876539 10876773 -134712515 - L3 LINE CR1 -15 1562 1316 699 300 53 50 chr10 10877395 10877718 -134711570 - L3 LINE CR1 -288 1289 966 203 309 12 12 chr10 10878058 10878139 -134711149 + MIR3 SINE MIR 125 205 -3 2203 111 0 0 chr10 10878529 10878817 -134710471 - AluSg SINE Alu -22 288 1 503 283 18 0 chr10 10879902 10880062 -134709226 - MIR3 SINE MIR -3 205 41 198 118 0 0 chr10 10880684 10880718 -134708570 + (TG)n Simple_repeat Simple_repeat 2 35 0 7282 24 22 1 chr10 10882024 10883200 -134706088 + L1PA4 LINE L1 4975 6168 0 2137 125 0 25 chr10 10885547 10885868 -134703420 + AluSq SINE Alu 1 313 0 22 0 0 0 chr10 10886644 10886666 -134702622 + AT_rich Low_complexity Low_complexity 1 22 0 6488 72 14 14 chr10 10887143 10888225 -134701063 + L1PA10 LINE L1 5080 6168 0 272 333 25 68 chr10 10888910 10889147 -134700141 + L2 LINE L2 886 1112 -2202 432 318 41 30 chr10 10889534 10889962 -134699326 - L1MEd LINE L1 -992 1498 974 30 77 0 0 chr10 10889988 10890053 -134699235 + AT_rich Low_complexity Low_complexity 1 65 0 2027 158 0 50 chr10 10891099 10891479 -134697809 + THE1B LTR MaLR 1 361 -3 494 369 77 14 chr10 10892105 10892455 -134696833 + L2 LINE L2 1215 1586 -1728 440 274 152 20 chr10 10892461 10892658 -134696630 - MER58A DNA MER1_type -1 223 1 419 265 118 38 chr10 10892875 10893113 -134696175 + L2 LINE L2 3057 3313 0 459 277 133 6 chr10 10893145 10893311 -134695977 + LTR16A LTR ERVL 16 202 -248 750 268 19 48 chr10 10893371 10893640 -134695648 + LTR16A LTR ERVL 190 450 0 2139 16 0 0 chr10 10894340 10894585 -134694703 + L1PA2 LINE L1 5909 6153 -2 512 284 106 23 chr10 10895903 10896121 -134693167 + MIR SINE MIR 15 250 -12 570 29 0 0 chr10 10896295 10896363 -134692925 + (TG)n Simple_repeat Simple_repeat 2 69 0 184 309 29 15 chr10 10897314 10897382 -134691906 - MIR3 SINE MIR -45 163 95 850 142 0 0 chr10 10897998 10898118 -134691170 + AluJ SINE Alu 1 120 -192 232 271 0 0 chr10 10898118 10898166 -134691122 + (TATATG)n Simple_repeat Simple_repeat 5 52 0 934 213 0 0 chr10 10898173 10898347 -134690941 + AluJ SINE Alu 130 303 -9 2376 46 40 16 chr10 10898483 10898787 -134690501 + AluY SINE Alu 1 311 0 636 297 74 13 chr10 10899405 10899634 -134689654 - MIR SINE MIR -11 251 9 256 198 22 110 chr10 10901022 10901113 -134688175 - MIR SINE MIR -57 205 123 2182 114 0 3 chr10 10903726 10904023 -134685265 - AluSx SINE Alu -16 296 1 210 399 34 11 chr10 10904191 10904369 -134684919 - MIR SINE MIR -12 250 69 1407 56 1 1 chr10 10904379 10904567 -134684721 - L1PA6 LINE L1 -291 5863 5698 757 47 0 47 chr10 10904567 10904667 -134684621 + L1PA5 LINE L1 6053 6153 -1 249 33 0 0 chr10 10905681 10905711 -134683577 + (A)n Simple_repeat Simple_repeat 1 30 0 275 310 80 0 chr10 10907756 10907869 -134681419 + MIR SINE MIR 121 242 -20 261 98 0 0 chr10 10908237 10908278 -134681010 + (CA)n Simple_repeat Simple_repeat 1 41 0 802 274 83 76 chr10 10908720 10909348 -134679940 - L1MC4a LINE L1 -1909 5899 5268 31 68 0 0 chr10 10909626 10909685 -134679603 + AT_rich Low_complexity Low_complexity 1 59 0 482 333 50 20 chr10 10909922 10910219 -134679069 - L1MC4a LINE L1 -1537 4609 4304 440 286 63 80 chr10 10910397 10910472 -134678816 - MLT1I LTR MaLR -6 403 328 1667 93 0 9 chr10 10910472 10910698 -134678590 - AluSc SINE Alu -3 306 83 440 286 63 80 chr10 10910698 10910985 -134678303 - MLT1I LTR MaLR -81 328 47 312 137 0 0 chr10 10914165 10914216 -134675072 + (TTCA)n Simple_repeat Simple_repeat 4 54 0 260 368 65 65 chr10 10915782 10916092 -134673196 + L2 LINE L2 2949 3258 -14 251 291 83 126 chr10 10916129 10916503 -134672785 + L2 LINE L2 2915 3272 0 182 299 184 23 chr10 10917038 10917125 -134672163 + MIR SINE MIR 47 147 -115 2133 119 0 25 chr10 10917250 10917568 -134671720 - AluSq SINE Alu -3 310 1 2746 124 3 0 chr10 10919027 10919390 -134669898 + THE1B LTR MaLR 1 364 0 270 56 0 0 chr10 10920212 10920248 -134669040 + (TG)n Simple_repeat Simple_repeat 2 37 0 1905 164 0 3 chr10 10921192 10921491 -134667797 + AluJo SINE Alu 3 300 -12 309 311 57 0 chr10 10921508 10921614 -134667674 + L2 LINE L2 3151 3262 -10 186 237 26 0 chr10 10922672 10922710 -134666578 - MIR SINE MIR -76 132 94 212 274 39 49 chr10 10923004 10923106 -134666182 + L2 LINE L2 2949 3049 -223 208 241 51 51 chr10 10923988 10924067 -134665221 + L2 LINE L2 2095 2173 -1141 1268 188 4 8 chr10 10926434 10926673 -134662615 + L1MB7 LINE L1 5431 5668 -516 43397 35 23 2 chr10 10926677 10932704 -134656584 + L1PA2 LINE L1 1 6155 0 1725 216 44 33 chr10 10932745 10933195 -134656093 + L1MB7 LINE L1 5652 6106 -78 383 98 0 0 chr10 10933224 10933275 -134656013 - MADE1 DNA Mariner -28 52 2 350 132 0 0 chr10 10933277 10933330 -134655958 + L1MB8 LINE L1 6120 6172 -6 337 298 71 89 chr10 10933347 10933629 -134655659 + L1ME3A LINE L1 5811 6087 -83 923 180 40 110 chr10 10935653 10935953 -134653335 + MLT1D LTR MaLR 82 360 -145 207 321 83 0 chr10 10936079 10936163 -134653125 - MIR SINE MIR -82 180 90 2048 213 68 41 chr10 10936854 10937416 -134651872 - L1ME2 LINE L1 -1 6163 5585 1016 214 77 114 chr10 10937532 10937989 -134651299 - LTR16A1 LTR ERVL -14 443 4 250 238 24 12 chr10 10941164 10941248 -134648040 + (TA)n Simple_repeat Simple_repeat 1 85 0 2894 10 0 0 chr10 10942400 10942711 -134646577 + AluY SINE Alu 1 311 0 241 185 19 19 chr10 10942763 10942817 -134646471 + (CA)n Simple_repeat Simple_repeat 1 54 0 348 253 140 7 chr10 10943963 10944113 -134645175 - L1ME1 LINE L1 -4 6162 5993 2030 147 7 0 chr10 10944495 10944795 -134644493 + AluSx SINE Alu 1 302 -10 218 349 8 39 chr10 10944984 10945113 -134644175 + MIR SINE MIR 79 203 -59 2222 113 3 0 chr10 10945719 10946021 -134643267 - AluSp SINE Alu -10 303 1 5331 183 27 62 chr10 10946246 10946708 -134642580 - L1MC1 LINE L1 -9 6604 6127 1774 193 10 0 chr10 10946708 10947013 -134642275 + AluJb SINE Alu 3 310 -2 5331 183 27 62 chr10 10947013 10947550 -134641738 - L1MC1 LINE L1 -486 6127 5573 2105 137 0 7 chr10 10947550 10947849 -134641439 - AluSx SINE Alu -15 297 1 5331 183 27 62 chr10 10947849 10949184 -134640104 - L1MC1 LINE L1 -1040 5573 4346 8837 189 71 50 chr10 10949184 10952686 -134636602 - L1MC1 LINE L1 -2824 3602 28 401 322 27 27 chr10 10953257 10953440 -134635848 + MER5A DNA MER1_type 3 185 -4 2189 129 0 0 chr10 10955100 10955409 -134633879 - AluSx SINE Alu -3 309 1 401 196 144 26 chr10 10955522 10955675 -134633613 - Charlie2 DNA MER1_type -147 2715 2545 435 83 0 0 chr10 10955951 10956011 -134633277 + (TATG)n Simple_repeat Simple_repeat 3 62 0 244 196 22 0 chr10 10956049 10956095 -134633193 - MER21A LTR ERV1 -203 728 682 * 1920 251 32 18 chr10 10956069 10956629 -134632659 - MER77 LTR ERV1 -7 598 56 1322 231 40 6 chr10 10957207 10957536 -134631752 - MER58B DNA MER1_type 0 341 2 1730 173 3 7 chr10 10960280 10960581 -134628707 + AluJb SINE Alu 1 300 -12 1959 151 47 16 chr10 10962280 10962644 -134626644 + THE1C LTR MaLR 1 375 0 1535 181 27 34 chr10 10964545 10964838 -134624450 + AluJo SINE Alu 1 291 -21 1849 158 137 11 chr10 10964910 10965290 -134623998 - MSTA LTR MaLR 0 428 1 187 268 71 93 chr10 10966348 10966417 -134622871 + MIR SINE MIR 2 71 -191 1982 145 7 3 chr10 10966417 10966713 -134622575 + AluSx SINE Alu 1 297 -15 187 268 71 93 chr10 10966713 10966826 -134622462 + MIR SINE MIR 71 180 -82 40283 34 26 2 chr10 10966826 10972818 -134616470 - L1PA3 LINE L1 -1 6154 12 1405 185 13 75 chr10 10973287 10973617 -134615671 - MLT1A1 LTR MaLR 0 365 61 1680 138 0 23 chr10 10973617 10973877 -134615411 - AluSx SINE Alu -22 290 37 1405 185 13 75 chr10 10973877 10973935 -134615353 - MLT1A1 LTR MaLR -304 61 1 219 360 13 39 chr10 10974135 10974288 -134615000 + MIR SINE MIR 84 232 -30 257 262 40 13 chr10 10974746 10974895 -134614393 + (TA)n Simple_repeat Simple_repeat 2 154 0 222 287 267 32 chr10 10975439 10975690 -134613598 - L2 LINE L2 -338 2976 2667 244 336 36 22 chr10 10976184 10976461 -134612827 + MER34 LTR ERV1 1 281 -261 242 298 68 48 chr10 10976473 10976725 -134612563 + MER34 LTR ERV1 257 513 -29 2016 137 0 3 chr10 10978418 10978703 -134610585 - AluSg SINE Alu -26 284 1 630 299 74 17 chr10 10978968 10979199 -134610089 - MIR SINE MIR 0 262 19 356 200 89 22 chr10 10979387 10979477 -134609811 + MER5B DNA MER1_type 80 175 -3 21 0 0 0 chr10 10980342 10980363 -134608925 + AT_rich Low_complexity Low_complexity 1 21 0 1511 211 10 0 chr10 10980728 10981017 -134608271 + AluJo SINE Alu 3 294 -18 21 0 0 0 chr10 10981182 10981203 -134608085 + AT_rich Low_complexity Low_complexity 1 21 0 391 317 8 24 chr10 10982498 10982621 -134606667 - MIR3 SINE MIR -75 133 13 560 333 68 24 chr10 10983254 10983548 -134605740 + L3 LINE CR1 1233 1539 -38 285 278 113 0 chr10 10984060 10984157 -134605131 - MIR3 SINE MIR -6 202 95 195 139 0 0 chr10 10984669 10984705 -134604583 + (CA)n Simple_repeat Simple_repeat 2 37 0 543 190 65 65 chr10 10986808 10986992 -134602296 - MER20 DNA MER1_type 0 219 36 2200 130 0 0 chr10 10987422 10987721 -134601567 + AluSx SINE Alu 4 302 -10 234 0 0 0 chr10 10987967 10987993 -134601295 + (A)n Simple_repeat Simple_repeat 1 26 0 651 315 245 20 chr10 10988134 10989228 -134600060 + L2 LINE L2 1945 3299 -14 2172 138 0 0 chr10 10989572 10989877 -134599411 + AluSx SINE Alu 1 305 -7 1873 157 17 0 chr10 10992083 10992377 -134596911 + AluJb SINE Alu 1 299 -13 21 0 0 0 chr10 10993321 10993342 -134595946 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr10 10993731 10993759 -134595529 + AT_rich Low_complexity Low_complexity 1 28 0 2381 92 0 0 chr10 10994161 10994464 -134594824 + AluSx SINE Alu 1 303 -9 1873 112 105 4 chr10 10994800 10995077 -134594211 - AluSg SINE Alu -5 305 1 1485 194 0 37 chr10 10995088 10995387 -134593901 - AluJo SINE Alu -24 288 1 596 250 127 42 chr10 10995460 10995672 -134593616 + MIR SINE MIR 30 259 -3 240 210 81 0 chr10 10995999 10996061 -134593227 + MIR SINE MIR 128 194 -68 21 57 0 0 chr10 10997408 10997443 -134591845 + AT_rich Low_complexity Low_complexity 1 35 0 1674 154 9 49 chr10 10997840 10998164 -134591124 + AluJo SINE Alu 1 311 -1 243 268 0 0 chr10 11000065 11000121 -134589167 + MIR SINE MIR 92 147 -61 276 122 20 20 chr10 11000150 11000199 -134589089 + AluSp SINE Alu 120 168 -135 2225 116 0 7 chr10 11000199 11000502 -134588786 + AluSg SINE Alu 7 307 -3 240 356 25 8 chr10 11001398 11001516 -134587772 + MIR3 SINE MIR 9 128 -80 29 0 0 0 chr10 11001641 11001670 -134587618 + AT_rich Low_complexity Low_complexity 1 29 0 1453 239 46 19 chr10 11002080 11002449 -134586839 - L1MDa LINE L1 -6127 413 35 2389 139 89 5 chr10 11002617 11003012 -134586276 - MSTA LTR MaLR 0 428 1 2464 84 0 0 chr10 11003314 11003625 -134585663 + AluY SINE Alu 1 311 0 245 310 160 72 chr10 11003695 11003977 -134585311 - L2 LINE L2 -2 3270 2953 2222 101 0 47 chr10 11003977 11004294 -134584994 + AluSg SINE Alu 1 302 -8 245 310 160 72 chr10 11004294 11004343 -134584945 - L2 LINE L2 -319 2953 2910 1166 149 19 37 chr10 11005394 11005608 -134583680 + AluSg/x SINE Alu 83 292 -18 2309 115 0 0 chr10 11006014 11006318 -134582970 + AluSx SINE Alu 1 304 -8 395 335 88 16 chr10 11006473 11006792 -134582496 + MLT1I LTR MaLR 18 359 -50 288 0 0 0 chr10 11007063 11007095 -134582193 + (CA)n Simple_repeat Simple_repeat 2 33 0 530 259 114 34 chr10 11008037 11008300 -134580988 + LTR43 LTR ERV1 187 470 -132 2370 99 0 0 chr10 11008340 11008643 -134580645 - AluSx SINE Alu -9 303 1 2154 145 34 26 chr10 11009334 11009673 -134579615 - THE1B LTR MaLR 0 364 23 1298 199 116 47 chr10 11009673 11010161 -134579127 - MER69 DNA AcHobo -2 2524 2010 * 1357 304 74 30 chr10 11010159 11010593 -134578695 - MER69 DNA AcHobo -658 568 104 480 268 9 0 chr10 11010593 11010705 -134578583 - MER81 DNA DNA 0 114 2 1357 304 74 30 chr10 11010705 11010813 -134578475 - MER69 DNA AcHobo -1122 104 2 186 263 140 26 chr10 11011516 11011630 -134577658 - L3b LINE CR1 -235 1348 1222 407 281 23 23 chr10 11011793 11011921 -134577367 + MIR3 SINE MIR 66 193 -15 419 51 0 17 chr10 11012171 11012230 -134577058 + (TTTC)n Simple_repeat Simple_repeat 3 60 0 273 169 0 0 chr10 11012385 11012444 -134576844 + (TTTG)n Simple_repeat Simple_repeat 2 60 0 21 57 0 0 chr10 11012800 11012835 -134576453 + AT_rich Low_complexity Low_complexity 1 35 0 208 338 12 0 chr10 11013681 11013761 -134575527 + L2 LINE L2 2709 2789 -525 342 336 64 49 chr10 11013828 11014155 -134575133 + L1ME4a LINE L1 5501 5832 -289 * 1139 220 17 9 chr10 11014147 11014379 -134574909 + L1MC3 LINE L1 7137 7370 -415 333 141 172 0 chr10 11014381 11014445 -134574843 - L1MA9 LINE L1 0 6312 6238 1348 167 26 0 chr10 11014446 11014679 -134574609 + L1MC3 LINE L1 7356 7594 -191 924 165 71 6 chr10 11014680 11014862 -134574426 + L1MC2 LINE L1 6138 6331 -13 207 232 18 0 chr10 11014974 11015030 -134574258 + (TA)n Simple_repeat Simple_repeat 1 57 0 1607 195 15 9 chr10 11015262 11015590 -134573698 - L1MD3 LINE L1 -13 7982 7653 * 2323 153 17 85 chr10 11015587 11016210 -134573078 - L1M2 LINE L1 -745 5401 4885 * 3522 193 24 46 chr10 11016207 11017026 -134572262 + L1MA9 LINE L1 5474 6274 -38 2195 79 59 0 chr10 11017050 11017340 -134571948 + AluSc SINE Alu 1 307 -2 2137 195 95 21 chr10 11017340 11017899 -134571389 - L1MC4a LINE L1 -318 7490 6891 1028 188 41 10 chr10 11017912 11018109 -134571179 + MER6B DNA MER2_type 8 210 0 1082 212 0 0 chr10 11018170 11018363 -134570925 + AluJo SINE Alu 5 197 -115 264 271 112 28 chr10 11018825 11018932 -134570356 - L2 LINE L2 0 3272 3157 195 69 0 0 chr10 11020933 11020962 -134568326 + (A)n Simple_repeat Simple_repeat 1 29 0 402 315 30 56 chr10 11023065 11023262 -134566026 - L2 LINE L2 -4 3309 3118 1449 78 0 21 chr10 11023540 11023731 -134565557 - AluY SINE Alu -26 285 99 2483 125 26 24 chr10 11023783 11024198 -134565090 + L1MA4A LINE L1 5885 6300 -3 497 269 121 70 chr10 11024231 11024286 -134565002 - L2 LINE L2 -574 2740 2689 2362 107 0 0 chr10 11024286 11024596 -134564692 + AluY SINE Alu 1 310 -1 497 269 121 70 chr10 11024596 11024986 -134564302 - L2 LINE L2 -625 2689 2272 671 266 93 8 chr10 11025317 11025670 -134563618 + L1ME4a LINE L1 5710 6092 -29 2325 109 0 0 chr10 11025821 11026124 -134563164 + AluSc SINE Alu 1 303 -6 215 262 16 16 chr10 11026278 11026339 -134562949 - MIR SINE MIR -5 257 197 2411 94 0 3 chr10 11028228 11028537 -134560751 + AluSc SINE Alu 1 308 -1 207 0 0 0 chr10 11028622 11028645 -134560643 + (A)n Simple_repeat Simple_repeat 1 23 0 507 249 57 11 chr10 11028807 11028984 -134560304 - MER112 DNA MER1_type -6 254 70 279 0 0 0 chr10 11029119 11029150 -134560138 + (TG)n Simple_repeat Simple_repeat 2 32 0 216 0 0 0 chr10 11029881 11029905 -134559383 + (T)n Simple_repeat Simple_repeat 1 24 0 1692 189 0 23 chr10 11029963 11030265 -134559023 - AluJo SINE Alu -11 301 7 311 269 110 39 chr10 11031156 11031489 -134557799 - MLT1K LTR MaLR -2 597 252 239 192 13 64 chr10 11032107 11032185 -134557103 + HSMAR1 DNA Mariner 1214 1287 0 2327 110 0 0 chr10 11032681 11032990 -134556298 + AluSg SINE Alu 1 309 -1 1413 188 4 4 chr10 11032995 11033245 -134556043 + AluJo SINE Alu 1 250 -62 188 32 97 0 chr10 11033268 11033299 -134555989 + A-rich Low_complexity Low_complexity 4 37 0 2159 131 3 0 chr10 11035116 11035428 -134553860 - AluSq SINE Alu 0 313 1 2143 118 7 0 chr10 11035726 11036023 -134553265 - AluSq SINE Alu -14 299 1 753 337 57 37 chr10 11036470 11037237 -134552051 - L2 LINE L2 -213 3059 2276 2297 203 17 53 chr10 11037248 11037725 -134551563 + MLT2B1 LTR ERVL 1 459 -61 450 0 0 0 chr10 11037725 11037775 -134551513 + (TG)n Simple_repeat Simple_repeat 2 51 0 2297 203 17 53 chr10 11037775 11037829 -134551459 + MLT2B1 LTR ERVL 459 513 -7 600 319 124 9 chr10 11037853 11038298 -134550990 - L2 LINE L2 -1069 2245 1750 892 152 0 0 chr10 11038579 11038711 -134550577 + FLAM_C SINE Alu 1 132 -11 371 125 0 0 chr10 11038716 11038772 -134550516 + Alu SINE Alu 239 294 -6 315 243 76 35 chr10 11040718 11040883 -134548405 - LTR16A1 LTR ERVL 0 479 323 1256 321 56 39 chr10 11042223 11042990 -134546298 - ERVL LTR ERVL -1313 4451 3672 216 135 0 0 chr10 11043027 11043064 -134546224 + (CCA)n Simple_repeat Simple_repeat 1 37 0 27 0 0 0 chr10 11043282 11043309 -134545979 + AT_rich Low_complexity Low_complexity 1 27 0 2766 20 0 0 chr10 11043534 11043836 -134545452 + AluY SINE Alu 1 302 -9 1352 81 0 0 chr10 11043836 11044009 -134545279 + AluY SINE Alu 133 305 -6 2079 141 3 0 chr10 11044381 11044693 -134544595 - AluSq SINE Alu 0 313 1 232 398 59 0 chr10 11044930 11045048 -134544240 - L2 LINE L2 -11 3261 3137 436 325 73 73 chr10 11045236 11045300 -134543988 - L2 LINE L2 -481 2833 2770 2194 104 0 3 chr10 11045300 11045612 -134543676 + AluSx SINE Alu 1 311 0 436 325 73 73 chr10 11045612 11046069 -134543219 - L2 LINE L2 -543 2771 2311 652 62 0 0 chr10 11046069 11046149 -134543139 + AluSg/x SINE Alu 199 278 -32 216 0 0 0 chr10 11046149 11046173 -134543115 + (CAAT)n Simple_repeat Simple_repeat 4 27 0 293 365 29 22 chr10 11046689 11046826 -134542462 - MER5A DNA MER1_type 0 189 52 225 259 192 52 chr10 11047032 11047225 -134542063 + MLT1K LTR MaLR 186 405 -183 2140 127 22 60 chr10 11047296 11047665 -134541623 + THE1A LTR MaLR 1 355 0 230 219 0 0 chr10 11047714 11047755 -134541533 + MLT1K LTR MaLR 548 588 0 283 327 58 10 chr10 11048063 11048167 -134541121 + MIR SINE MIR 35 143 -65 310 241 113 44 chr10 11049433 11049557 -134539731 + MER5B DNA MER1_type 2 137 -52 458 286 35 105 chr10 11049967 11050163 -134539125 - L2 LINE L2 -15 3298 3090 2647 129 48 12 chr10 11050163 11050575 -134538713 + MSTA LTR MaLR 2 428 0 458 286 35 105 chr10 11050575 11050689 -134538599 - L2 LINE L2 -223 3090 2969 2137 128 7 0 chr10 11050689 11050995 -134538293 - AluSx SINE Alu -3 309 2 458 286 35 105 chr10 11050995 11051168 -134538120 - L2 LINE L2 -344 2969 2879 1715 155 61 0 chr10 11051168 11051446 -134537842 + AluSx SINE Alu 1 295 -17 458 286 35 105 chr10 11051446 11051636 -134537652 - L2 LINE L2 -434 2879 2677 460 328 97 43 chr10 11052775 11053816 -134535472 + L2 LINE L2 1966 3042 -230 192 229 66 0 chr10 11054676 11054737 -134534551 - L2 LINE L2 -203 3069 3005 255 227 0 30 chr10 11055293 11055359 -134533929 + CT-rich Low_complexity Low_complexity 6 69 0 509 286 34 51 chr10 11055430 11055608 -134533680 - MER5B DNA MER1_type -1 177 3 2165 104 0 0 chr10 11056274 11056597 -134532691 - AluSc SINE Alu 0 324 2 1905 151 91 0 chr10 11056968 11057154 -134532134 + MER7A DNA MER2_type 1 169 -2869 2809 107 0 6 chr10 11057154 11057520 -134531768 - THE1B LTR MaLR 0 364 1 1905 151 91 0 chr10 11057520 11057652 -134531636 + MER7A DNA MER2_type 169 346 0 1317 199 92 40 chr10 11057656 11057983 -134531305 - MER2 DNA MER2_type 0 344 1 1762 178 108 52 chr10 11057983 11058427 -134530861 - MLT2B1 LTR ERVL -51 469 1 1817 180 80 42 chr10 11058967 11059417 -134529871 + MLT1C LTR MaLR 1 467 0 2169 118 3 13 chr10 11059524 11059829 -134529459 + AluSc SINE Alu 1 302 -7 4148 183 110 4 chr10 11059936 11060683 -134528605 - LTR1B LTR ERV1 0 826 1 539 261 14 7 chr10 11061009 11061147 -134528141 - MER5B DNA MER1_type 0 178 40 4210 127 13 27 chr10 11061156 11061850 -134527438 + L1MA8 LINE L1 5607 6290 -1 209 288 141 28 chr10 11061944 11062121 -134527167 + MIR SINE MIR 15 211 -51 240 86 0 0 chr10 11062704 11062739 -134526549 + (CA)n Simple_repeat Simple_repeat 2 36 0 180 0 0 0 chr10 11063046 11063066 -134526222 + (CA)n Simple_repeat Simple_repeat 1 20 0 2308 117 0 0 chr10 11064273 11064582 -134524706 - AluSx SINE Alu -3 309 1 574 303 122 30 chr10 11065050 11065575 -134523713 - L1ME4a LINE L1 -195 5926 5354 633 291 66 0 chr10 11066705 11066901 -134522387 + MIR SINE MIR 28 236 -26 445 218 250 45 chr10 11067552 11067772 -134521516 + MER5C DNA MER1_type 25 289 -35 441 179 28 28 chr10 11067772 11067917 -134521371 + GA-rich Low_complexity Low_complexity 2 146 0 688 175 30 85 chr10 11069718 11069918 -134519370 + MER53 DNA DNA 1 189 0 201 233 0 0 chr10 11071749 11071792 -134517496 + (CCCCAA)n Simple_repeat Simple_repeat 3 45 0 437 280 0 65 chr10 11071986 11072154 -134517134 + MIR SINE MIR 80 236 -26 776 248 135 30 chr10 11073063 11073463 -134515825 - MER113 DNA MER1_type? -45 476 35 1888 154 3 25 chr10 11075017 11075336 -134513952 + AluSx SINE Alu 1 312 0 195 42 0 0 chr10 11075409 11075433 -134513855 + (CCCCCA)n Simple_repeat Simple_repeat 1 24 0 237 342 135 0 chr10 11076056 11076178 -134513110 - L1ME LINE L1 -214 5907 5803 1806 108 0 4 chr10 11076178 11076419 -134512869 - AluSq SINE Alu -20 293 54 237 342 135 0 chr10 11076419 11076489 -134512799 - L1ME LINE L1 -318 5803 5689 2269 101 3 3 chr10 11078010 11078316 -134510972 + AluSc SINE Alu 1 306 -3 809 321 82 27 chr10 11078671 11079388 -134509900 + L2 LINE L2 2307 3068 -245 257 275 14 0 chr10 11079425 11079494 -134509794 + MER116 DNA Mariner 7 76 -4 229 291 187 8 chr10 11079499 11079633 -134509655 + L2 LINE L2 3118 3275 -38 213 39 0 0 chr10 11079637 11079663 -134509625 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 213 333 16 0 chr10 11079702 11079765 -134509523 + L2 LINE L2 3203 3266 -47 864 252 28 33 chr10 11079979 11080193 -134509095 - MER58A DNA MER1_type 0 224 12 429 330 36 10 chr10 11080861 11081055 -134508233 - MIR SINE MIR -1 261 63 807 147 0 21 chr10 11081305 11081448 -134507840 - MER67A LTR ERV1 -322 221 82 487 152 48 29 chr10 11081473 11081578 -134507710 - MER67A LTR ERV1 -432 111 5 1495 207 23 42 chr10 11081584 11081937 -134507351 - MER67A-int LTR ERV1 -23 4913 4568 2278 106 0 3 chr10 11082020 11082323 -134506965 - AluSc SINE Alu -7 302 1 382 170 0 205 chr10 11082521 11082692 -134506596 - MER67A-int LTR ERV1 -467 4469 4334 260 191 162 15 chr10 11082697 11082765 -134506523 - LTR37A LTR ERV1 -336 90 13 6243 218 30 72 chr10 11082780 11084645 -134504643 - MER67A-int LTR ERV1 -687 4249 2463 257 214 36 80 chr10 11084682 11084794 -134504494 - MER67B-int LTR ERV1 -3799 4321 4215 856 251 33 45 chr10 11084797 11085222 -134504066 + MLT1B LTR MaLR 1 387 -3 357 237 92 15 chr10 11085226 11085357 -134503931 - MER67B-int LTR ERV1 -2579 2357 2217 * 550 224 75 42 chr10 11085324 11085565 -134503723 - MER67B-int LTR ERV1 -3004 1932 1684 4543 208 127 47 chr10 11085617 11086918 -134502370 - MER67B-int LTR ERV1 -3438 1498 94 1947 206 33 70 chr10 11087054 11087740 -134501548 - MER67B LTR ERV1 -32 558 8 2258 142 39 25 chr10 11087897 11088256 -134501032 - THE1B LTR MaLR 0 364 1 186 167 258 30 chr10 11088377 11088443 -134500845 + L2 LINE L2 3168 3248 -24 490 155 0 36 chr10 11089552 11089636 -134499652 - MER58A DNA MER1_type -24 83 3 234 0 0 0 chr10 11090034 11090060 -134499228 + (A)n Simple_repeat Simple_repeat 1 26 0 4328 78 49 7 chr10 11093019 11093607 -134495681 - L1MA1 LINE L1 0 6302 5690 309 276 71 10 chr10 11093699 11093797 -134495491 + MIR SINE MIR 9 112 -150 1993 108 0 78 chr10 11094361 11094695 -134494593 - AluSx SINE Alu -2 310 3 297 246 78 53 chr10 11094838 11095016 -134494272 + MIR SINE MIR 26 208 -54 25 0 0 0 chr10 11095056 11095081 -134494207 + AT_rich Low_complexity Low_complexity 1 25 0 419 281 124 52 chr10 11095245 11095512 -134493776 + L2 LINE L2 1875 2160 -1154 239 183 83 17 chr10 11095664 11095724 -134493564 + Charlie8 DNA MER1_type 1364 1427 -990 2722 100 6 0 chr10 11095734 11096085 -134493203 + THE1A LTR MaLR 1 353 -2 436 281 70 116 chr10 11096269 11096596 -134492692 - L2 LINE L2 -5 3267 2956 * 532 361 112 18 chr10 11096592 11097099 -134492189 - L2 LINE L2 -518 2796 2242 1558 154 64 7 chr10 11097468 11097748 -134491540 - AluJo SINE Alu -16 296 1 201 195 0 0 chr10 11098534 11098575 -134490713 + GA-rich Low_complexity Low_complexity 2 42 0 487 267 126 0 chr10 11099554 11099689 -134489599 - MIR SINE MIR -35 227 76 464 126 27 18 chr10 11099736 11099847 -134489441 + (TAGA)n Simple_repeat Simple_repeat 3 114 0 2481 67 0 13 chr10 11101014 11101329 -134487959 - AluY SINE Alu 0 311 1 436 268 75 49 chr10 11101528 11101696 -134487592 + MIR3 SINE MIR 34 208 -35 244 250 62 31 chr10 11101755 11101851 -134487437 - MIR SINE MIR 0 262 164 275 386 21 7 chr10 11102055 11102195 -134487093 - MIR SINE MIR -111 151 10 927 169 0 16 chr10 11102215 11102398 -134486890 + MER53 DNA DNA 10 189 0 270 0 0 0 chr10 11102918 11102948 -134486340 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 3322 187 53 8 chr10 11103765 11104496 -134484792 + L1MB3 LINE L1 5418 6181 -2 238 310 133 38 chr10 11105169 11105327 -134483961 + MIR3 SINE MIR 33 205 -3 21 0 0 0 chr10 11106096 11106117 -134483171 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 11106350 11106371 -134482917 + AT_rich Low_complexity Low_complexity 1 21 0 250 191 0 21 chr10 11107460 11107507 -134481781 + L2 LINE L2 3256 3301 -12 2221 116 0 0 chr10 11107509 11107802 -134481486 + AluSx SINE Alu 1 293 -19 2153 119 0 0 chr10 11107805 11108098 -134481190 + AluSx SINE Alu 1 293 -19 186 43 0 0 chr10 11108101 11108124 -134481164 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 351 0 0 0 chr10 11108833 11108872 -134480416 + (TG)n Simple_repeat Simple_repeat 2 40 0 5465 107 7 1 chr10 11109453 11110285 -134479003 + L1PA13 LINE L1 5314 6150 -13 198 198 44 99 chr10 11110376 11110467 -134478821 + L3 LINE CR1 1425 1510 -67 342 189 0 14 chr10 11110983 11111057 -134478231 - AluJ/FRAM SINE Alu -14 288 216 541 231 0 0 chr10 11111073 11111190 -134478098 - FLAM_A SINE Alu -6 136 20 2209 117 0 0 chr10 11111203 11111502 -134477786 - AluSx SINE Alu -13 299 1 888 303 65 65 chr10 11111667 11112343 -134476945 - L2 LINE L2 -812 2502 1827 1949 124 22 0 chr10 11112453 11112754 -134476534 - AluY SINE Alu 0 307 1 2041 109 46 57 chr10 11112918 11113286 -134476002 + THE1B LTR MaLR 1 364 0 9729 198 58 51 chr10 11113629 11114215 -134475073 - L1MC2 LINE L1 -11 7756 7176 312 242 11 11 chr10 11114215 11114306 -134474982 - MLT1F1 LTR MaLR -442 125 35 9729 198 58 51 chr10 11114306 11114677 -134474611 - L1MC2 LINE L1 -591 7176 6809 2073 104 3 27 chr10 11114677 11114976 -134474312 + AluSg SINE Alu 1 292 -18 9729 198 58 51 chr10 11114976 11116497 -134472791 - L1MC2 LINE L1 -958 6809 5301 4396 60 2 5 chr10 11116497 11117064 -134472224 - L1PA8 LINE L1 -7 6165 5601 9729 198 58 51 chr10 11117064 11119579 -134469709 - L1MC2 LINE L1 -2466 5301 2544 343 333 40 27 chr10 11119703 11119853 -134469435 + L3 LINE CR1 1417 1568 -9 357 198 47 19 chr10 11121425 11121531 -134467757 + L1MA9 LINE L1 6185 6293 -19 180 305 134 0 chr10 11121816 11121898 -134467390 + MIR3 SINE MIR 111 203 -5 281 219 52 0 chr10 11122958 11123054 -134466234 + (TA)n Simple_repeat Simple_repeat 2 102 0 252 266 53 53 chr10 11123546 11123659 -134465629 + MER5A DNA MER1_type 66 178 -11 403 194 41 20 chr10 11123556 11123654 -134465634 - MER5B DNA MER1_type -62 116 17 240 182 55 0 chr10 11123812 11123867 -134465421 + CT-rich Low_complexity Low_complexity 1 58 0 1144 194 65 50 chr10 11124893 11124934 -134464354 - L1MC4 LINE L1 -6 8036 7997 2034 118 9 41 chr10 11124934 11125249 -134464039 + AluSx SINE Alu 1 305 -7 1144 194 65 50 chr10 11125249 11125547 -134463741 - L1MC4 LINE L1 -45 7997 7692 2158 100 0 32 chr10 11125680 11125989 -134463299 + AluSg SINE Alu 1 299 -11 578 331 139 26 chr10 11125990 11126443 -134462845 - LTR67 LTR ERVL -44 513 10 556 294 34 0 chr10 11126463 11126609 -134462679 - MIR SINE MIR 0 262 112 2263 114 0 3 chr10 11126615 11126922 -134462366 - AluSx SINE Alu -3 309 4 470 122 293 8 chr10 11127039 11127162 -134462126 + L1MC/D LINE L1 5568 5725 -634 4215 220 23 20 chr10 11127179 11128616 -134460672 + L1MD2 LINE L1 4905 6349 -10 1935 151 0 7 chr10 11128815 11129100 -134460188 - AluSx SINE Alu -29 283 1 208 122 0 122 chr10 11131579 11131628 -134457660 - L2 LINE L2 -3 3310 3268 197 329 49 12 chr10 11131678 11131760 -134457528 - L2 LINE L2 -8 3305 3221 463 330 39 17 chr10 11132451 11132684 -134456604 + L2 LINE L2 1503 1740 -1574 1280 281 85 60 chr10 11132685 11133428 -134455860 + L1MEc LINE L1 55 846 -5550 390 68 0 40 chr10 11133428 11133502 -134455786 + (TA)n Simple_repeat Simple_repeat 1 71 0 1280 281 85 60 chr10 11133502 11134049 -134455239 + L1MEc LINE L1 846 1378 -5018 261 288 55 0 chr10 11134083 11134156 -134455132 - MLT1H LTR MaLR -249 300 224 354 234 234 34 chr10 11134291 11134530 -134454758 + L2 LINE L2 3026 3312 -1 1412 200 80 47 chr10 11135698 11136187 -134453101 - Charlie1b DNA MER1_type -2 521 17 903 200 101 37 chr10 11136413 11136743 -134452545 - MER57A LTR ERV1 0 403 113 784 194 7 0 chr10 11136768 11136907 -134452381 - FRAM SINE Alu -39 137 1 1461 201 60 0 chr10 11136924 11137193 -134452095 - AluJb SINE Alu -27 285 1 947 299 65 37 chr10 11138003 11138538 -134450750 - MLT1F1 LTR MaLR -17 550 1 197 291 0 0 chr10 11138944 11138999 -134450289 - L2 LINE L2 -2814 500 446 210 184 0 0 chr10 11139069 11139107 -134450181 - MIR SINE MIR -75 187 150 452 255 0 10 chr10 11139249 11139351 -134449937 + MIR SINE MIR 48 148 -114 604 62 0 12 chr10 11139396 11139477 -134449811 + MADE1 DNA Mariner 1 80 0 1047 265 58 6 chr10 11139566 11139891 -134449397 + MER93a LTR ERV1 61 402 0 253 240 47 108 chr10 11140001 11140130 -134449158 + MIR3 SINE MIR 60 180 -28 1633 226 3 21 chr10 11140230 11140610 -134448678 - MLT1A2 LTR MaLR 0 374 2 2123 119 23 10 chr10 11142150 11142452 -134446836 + AluSx SINE Alu 2 307 -5 1770 117 140 0 chr10 11142494 11142759 -134446529 + AluSq SINE Alu 1 302 -11 1031 209 30 0 chr10 11142903 11143104 -134446184 + MER63A DNA MER1_type 4 210 0 762 268 119 35 chr10 11143919 11144467 -134444821 - MLT1G1 LTR MaLR 0 595 2 257 177 0 16 chr10 11144585 11144647 -134444641 + L1ME3A LINE L1 6109 6169 -1 2130 120 0 10 chr10 11145105 11145397 -134443891 + AluSg SINE Alu 5 293 -17 520 250 42 8 chr10 11145654 11145774 -134443514 + FLAM_A SINE Alu 1 124 -9 423 118 0 40 chr10 11147328 11147404 -134441884 + AluSc SINE Alu 9 81 -228 186 240 0 0 chr10 11147420 11147470 -134441818 + GA-rich Low_complexity Low_complexity 3 52 0 180 0 0 0 chr10 11148476 11148496 -134440792 + (CAA)n Simple_repeat Simple_repeat 2 21 0 22 70 0 0 chr10 11149022 11149065 -134440223 + AT_rich Low_complexity Low_complexity 1 43 0 21 36 0 0 chr10 11149167 11149195 -134440093 + AT_rich Low_complexity Low_complexity 1 28 0 1647 133 13 74 chr10 11149848 11150157 -134439131 + AluJo SINE Alu 1 290 -22 23 0 0 0 chr10 11150543 11150566 -134438722 + AT_rich Low_complexity Low_complexity 1 23 0 182 128 26 0 chr10 11152679 11152718 -134436570 + (TG)n Simple_repeat Simple_repeat 1 40 0 1933 143 6 16 chr10 11153021 11153370 -134435918 - MER4A LTR ERV1 0 664 261 622 111 10 20 chr10 11153370 11153469 -134435819 - MER4A LTR ERV1 -566 98 1 195 100 0 0 chr10 11153608 11153638 -134435650 + (TTCC)n Simple_repeat Simple_repeat 3 32 0 205 310 169 38 chr10 11155299 11155483 -134433805 - L3b LINE CR1 -6 1577 1370 386 296 30 30 chr10 11156964 11157194 -134432094 - HAL1b LINE L1 -646 702 473 22 80 0 0 chr10 11158585 11158635 -134430653 + AT_rich Low_complexity Low_complexity 1 50 0 340 121 35 0 chr10 11159572 11159630 -134429658 + MER116 DNA Mariner 21 80 0 638 196 0 12 chr10 11159694 11159857 -134429431 + CT-rich Low_complexity Low_complexity 2 162 0 2246 119 0 3 chr10 11160783 11161086 -134428202 + AluSg SINE Alu 3 304 -6 959 247 113 14 chr10 11161433 11161818 -134427470 - MLT1D LTR MaLR 0 505 17 22 0 0 0 chr10 11161888 11161910 -134427378 + AT_rich Low_complexity Low_complexity 1 22 0 362 152 0 13 chr10 11161925 11162004 -134427284 + CT-rich Low_complexity Low_complexity 3 80 0 1733 182 7 0 chr10 11162375 11162671 -134426617 + AluJo SINE Alu 1 298 -14 2275 106 3 3 chr10 11163589 11163892 -134425396 - AluSx SINE Alu -9 303 1 220 328 144 55 chr10 11164487 11164813 -134424475 + L2 LINE L2 2918 3272 0 2274 103 0 0 chr10 11166552 11166870 -134422418 + AluSq SINE Alu 1 318 0 418 302 83 29 chr10 11167268 11167473 -134421815 - MIR SINE MIR -14 248 33 421 314 16 37 chr10 11167528 11167763 -134421525 + MIR SINE MIR 3 228 -34 189 261 25 84 chr10 11168956 11169075 -134420213 - MIR SINE MIR -75 187 76 2838 138 26 5 chr10 11169359 11169778 -134419510 - MSTA LTR MaLR 0 428 1 487 268 158 22 chr10 11170821 11171004 -134418284 - MIR SINE MIR -27 235 28 1036 231 78 14 chr10 11171127 11171409 -134417879 + MLT1-int LTR MaLR 357 656 -715 420 238 16 33 chr10 11171456 11171578 -134417710 + L1ME1 LINE L1 22 141 -6255 1801 262 20 22 chr10 11171601 11172094 -134417194 + L1ME1 LINE L1 121 612 -5784 470 216 0 0 chr10 11172122 11172219 -134417069 + L1ME1 LINE L1 2316 2412 -3984 1531 203 69 38 chr10 11172223 11172640 -134416648 + MLT1C LTR MaLR 6 435 -32 366 192 14 14 chr10 11172640 11172713 -134416575 - Tigger5 DNA MER2_type 0 2323 2251 305 218 0 0 chr10 11172682 11172737 -134416551 - Tigger5 DNA MER2_type -2268 55 1 * 4266 198 37 8 chr10 11172771 11173630 -134415658 + MLT1C-int LTR MaLR 1 884 -487 1506 207 25 13 chr10 11173814 11174128 -134415160 + MLT1C-int LTR MaLR 959 1276 -95 545 237 0 0 chr10 11174149 11174263 -134415025 + MLT1C LTR MaLR 353 466 -1 7590 225 61 86 chr10 11174266 11175284 -134414004 + L1ME1 LINE L1 2380 3422 -2813 485 227 182 0 chr10 11175284 11175416 -134413872 - MER58C DNA MER1_type 0 215 60 2455 107 169 0 chr10 11175416 11175782 -134413506 - MSTA LTR MaLR 0 428 1 7590 225 61 86 chr10 11175782 11177606 -134411682 + L1ME1 LINE L1 3421 5281 -954 322 85 0 0 chr10 11177606 11177653 -134411635 + MADE1 DNA Mariner 1 47 -33 7590 225 61 86 chr10 11177653 11178580 -134410708 + L1ME1 LINE L1 5281 6230 -5 473 164 0 65 chr10 11178590 11178856 -134410432 + GA-rich Low_complexity Low_complexity 1 248 0 247 343 6 45 chr10 11179985 11180041 -134409247 - L1MC/D LINE L1 -1907 5901 5844 1777 162 3 23 chr10 11180041 11180350 -134408938 - AluJo SINE Alu -9 303 1 247 343 6 45 chr10 11180350 11180471 -134408817 - L1MC/D LINE L1 -1964 5844 5731 347 238 125 50 chr10 11180874 11181034 -134408254 + MIR SINE MIR 90 261 -1 1696 158 0 55 chr10 11181280 11181416 -134407872 + AluSx SINE Alu 1 143 -169 2460 80 3 3 chr10 11181416 11181727 -134407561 + AluY SINE Alu 1 311 0 1696 158 0 55 chr10 11181727 11181918 -134407370 + AluSx SINE Alu 143 310 -2 317 269 10 39 chr10 11182184 11182288 -134407000 - L2 LINE L2 -34 3279 3179 2377 91 0 0 chr10 11182527 11182825 -134406463 - AluSc SINE Alu 0 309 12 246 156 0 0 chr10 11182918 11182963 -134406325 + (CA)n Simple_repeat Simple_repeat 2 46 0 261 0 0 0 chr10 11183457 11183486 -134405802 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2566 62 0 3 chr10 11184034 11184339 -134404949 - AluY SINE Alu -7 304 1 2063 128 3 10 chr10 11184603 11184909 -134404379 - AluSx SINE Alu -8 304 1 296 306 44 49 chr10 11185591 11185774 -134403514 + L2 LINE L2 3132 3313 0 23 54 0 0 chr10 11185999 11186036 -134403252 + AT_rich Low_complexity Low_complexity 1 37 0 2172 127 3 16 chr10 11186233 11186549 -134402739 + AluSx SINE Alu 1 312 0 465 199 33 124 chr10 11188012 11188214 -134401074 + L2 LINE L2 3027 3205 -108 2062 84 59 0 chr10 11188214 11188487 -134400801 - AluSc SINE Alu -20 289 1 465 199 33 124 chr10 11188487 11188525 -134400763 + L2 LINE L2 3205 3245 -68 674 288 14 28 chr10 11188607 11188822 -134400466 + MIR SINE MIR 15 226 -36 2364 106 0 0 chr10 11189199 11189510 -134399778 - AluSq SINE Alu -2 311 1 260 111 0 0 chr10 11189605 11189641 -134399647 + (GAAA)n Simple_repeat Simple_repeat 2 37 0 746 146 6 24 chr10 11189641 11189806 -134399482 + GA-rich Low_complexity Low_complexity 1 162 0 21 36 0 0 chr10 11190274 11190302 -134398986 + AT_rich Low_complexity Low_complexity 1 28 0 218 265 15 15 chr10 11190475 11190543 -134398745 - MIR SINE MIR -67 141 74 2199 119 0 10 chr10 11190666 11190969 -134398319 + AluSx SINE Alu 1 300 -12 198 264 0 38 chr10 11191145 11191198 -134398090 - MIR SINE MIR -13 249 199 1530 176 0 88 chr10 11191225 11191554 -134397734 - AluJo SINE Alu -12 300 1 196 254 90 97 chr10 11191614 11191748 -134397540 + L2 LINE L2 3181 3313 0 2142 134 0 0 chr10 11192425 11192732 -134396556 - AluSx SINE Alu -5 307 1 1657 178 0 26 chr10 11193151 11193460 -134395828 - AluJo SINE Alu -11 301 1 722 257 41 41 chr10 11193466 11193684 -134395604 + MER20 DNA MER1_type 1 218 -1 2033 144 3 0 chr10 11194808 11195113 -134394175 + AluSx SINE Alu 1 306 -6 352 240 11 27 chr10 11196497 11196680 -134392608 + GA-rich Low_complexity Low_complexity 1 180 0 2127 126 0 0 chr10 11196757 11197074 -134392214 - AluSx SINE Alu 0 317 1 2350 84 7 0 chr10 11197079 11197387 -134391901 - AluSx SINE Alu -2 310 1 238 240 123 45 chr10 11197445 11197599 -134391689 - L2 LINE L2 -1690 1624 1459 23 0 0 0 chr10 11199517 11199540 -134389748 + AT_rich Low_complexity Low_complexity 1 23 0 1819 15 0 0 chr10 11199930 11200130 -134389158 + AluY SINE Alu 111 310 -1 1383 215 90 56 chr10 11201978 11202354 -134386934 + MSTD LTR MaLR 3 391 -5 1272 316 125 33 chr10 11202666 11203246 -134386042 + L2 LINE L2 1905 2599 -715 1769 189 3 3 chr10 11203246 11203548 -134385740 - AluJo SINE Alu -10 302 1 1272 316 125 33 chr10 11203548 11203870 -134385418 + L2 LINE L2 2599 2890 -424 196 175 25 0 chr10 11204068 11204108 -134385180 + L2 LINE L2 3226 3266 -6 822 263 29 0 chr10 11204264 11204473 -134384815 + MER58A DNA MER1_type 10 224 0 317 156 62 0 chr10 11204659 11204723 -134384565 + L2 LINE L2 3232 3299 -14 272 273 0 0 chr10 11204741 11204818 -134384470 + (TGAA)n Simple_repeat Simple_repeat 1 77 0 481 315 94 8 chr10 11205010 11205245 -134384043 + MIR SINE MIR 7 261 -1 790 231 56 19 chr10 11205340 11205556 -134383732 + MIR SINE MIR 2 225 -37 2458 115 43 0 chr10 11207571 11207920 -134381368 - THE1B LTR MaLR 0 364 1 1660 141 52 20 chr10 11208023 11208370 -134380918 + L1MA7 LINE L1 5934 6291 0 260 122 41 0 chr10 11208484 11208533 -134380755 + (TATG)n Simple_repeat Simple_repeat 2 52 0 1857 142 0 27 chr10 11208832 11209127 -134380161 + AluJb SINE Alu 1 287 -25 4725 151 27 21 chr10 11209131 11209993 -134379295 - L1MA6 LINE L1 -12 6288 5422 348 297 27 18 chr10 11210116 11210227 -134379061 + L2 LINE L2 3156 3267 -5 2043 121 0 33 chr10 11211701 11212007 -134377281 + AluSx SINE Alu 13 308 -4 199 369 72 0 chr10 11212208 11212319 -134376969 - MIR3 SINE MIR -6 202 84 430 240 0 10 chr10 11212658 11212762 -134376526 - MER5A DNA MER1_type -83 106 4 2244 105 6 16 chr10 11212936 11213249 -134376039 - AluSx SINE Alu -2 310 1 245 323 127 1 chr10 11214481 11214788 -134374500 - LTR16C LTR ERVL -10 481 106 2123 115 7 7 chr10 11215081 11215405 -134373883 - AluSx SINE Alu 0 312 1 2484 76 0 0 chr10 11215492 11215794 -134373494 + AluY SINE Alu 1 302 -9 2103 143 7 0 chr10 11217531 11217831 -134371457 + AluSx SINE Alu 1 302 -10 1768 234 94 31 chr10 11218003 11218546 -134370742 - MLT1E LTR MaLR -2 591 15 958 183 144 18 chr10 11218882 11219111 -134370177 + LOR1a LTR ERV1 238 495 -2 185 0 40 0 chr10 11219414 11219439 -134369849 + (TTTG)n Simple_repeat Simple_repeat 1 26 0 1828 153 0 11 chr10 11219439 11219721 -134369567 - AluSx SINE Alu -33 279 1 474 283 66 0 chr10 11219955 11220107 -134369181 + L2 LINE L2 1858 2019 -1295 2163 134 0 3 chr10 11220415 11220722 -134368566 - AluSx SINE Alu -6 306 1 248 259 86 43 chr10 11220778 11220917 -134368371 - L2 LINE L2 -1697 1617 1473 503 239 81 53 chr10 11222479 11222688 -134366600 - MIR SINE MIR -36 226 12 193 200 13 6 chr10 11223404 11223449 -134365839 + L2 LINE L2 3186 3272 -41 1859 142 0 77 chr10 11225329 11225667 -134363621 + AluSx SINE Alu 1 312 0 1551 193 53 3 chr10 11226971 11227256 -134362032 - AluJo SINE Alu -13 299 1 1433 291 46 53 chr10 11229382 11230031 -134359257 + L1MC4a LINE L1 4945 5412 -758 2200 102 0 7 chr10 11230031 11230365 -134358923 - AluSg SINE Alu 0 332 1 1433 291 46 53 chr10 11230365 11230758 -134358530 + L1MC4a LINE L1 5412 5806 -364 455 296 47 6 chr10 11230939 11231108 -134358180 - MIR SINE MIR -74 188 13 180 250 0 0 chr10 11231202 11231242 -134358046 + MER5A DNA MER1_type 66 105 -84 573 273 46 21 chr10 11231353 11231547 -134357741 - MIR SINE MIR -61 201 3 194 264 0 0 chr10 11231669 11231722 -134357566 - MIR SINE MIR -60 148 96 242 360 23 6 chr10 11232268 11232443 -134356845 + MIR SINE MIR 30 207 -55 1805 160 3 29 chr10 11232465 11232777 -134356511 + AluJo SINE Alu 1 304 -8 272 295 97 14 chr10 11232817 11233024 -134356264 - L3 LINE CR1 -205 1372 1149 1613 172 51 3 chr10 11234395 11234691 -134354597 + AluJo SINE Alu 1 310 -2 1918 118 3 78 chr10 11234794 11235116 -134354172 + AluSx SINE Alu 1 298 -14 1992 138 3 22 chr10 11237282 11237600 -134351688 + AluSx SINE Alu 1 312 0 808 135 8 16 chr10 11237766 11237892 -134351396 + AluJb SINE Alu 1 125 -187 269 109 62 0 chr10 11237897 11237961 -134351327 + GA-rich Low_complexity Low_complexity 2 69 0 1491 202 10 17 chr10 11238260 11238552 -134350736 + AluJo SINE Alu 1 290 -22 573 15 0 0 chr10 11238814 11238880 -134350408 + (TTTTG)n Simple_repeat Simple_repeat 5 70 0 2093 99 0 48 chr10 11238880 11239174 -134350114 - AluSx SINE Alu -32 280 1 643 178 153 0 chr10 11241265 11241422 -134347866 - MER5A DNA MER1_type -7 182 2 2397 152 7 22 chr10 11242806 11243215 -134346073 - MER57A LTR ERV1 0 403 1 509 270 68 20 chr10 11243251 11243615 -134345673 - LTR16B LTR ERVL 0 464 48 189 0 0 0 chr10 11243738 11243759 -134345529 + (CA)n Simple_repeat Simple_repeat 1 21 0 1169 134 0 29 chr10 11244917 11245088 -134344200 + AluSg/x SINE Alu 124 289 -23 230 276 17 0 chr10 11245376 11245434 -134343854 + C-rich Low_complexity Low_complexity 3 61 0 2030 131 7 0 chr10 11245879 11246186 -134343102 - AluSx SINE Alu 0 309 1 207 24 24 48 chr10 11247380 11247422 -134341866 + (TTG)n Simple_repeat Simple_repeat 2 42 0 2101 132 0 0 chr10 11247425 11247706 -134341582 - AluSx SINE Alu -31 281 1 401 145 0 0 chr10 11247741 11247817 -134341471 - L1MA9 LINE L1 -10 6302 6227 255 267 27 0 chr10 11248090 11248165 -134341123 - MER103 DNA DNA 0 166 90 2047 113 33 3 chr10 11248827 11249127 -134340161 + AluSx SINE Alu 1 309 -3 1491 196 0 4 chr10 11249412 11249687 -134339601 - AluJo SINE Alu -38 274 1 461 273 173 18 chr10 11249826 11250046 -134339242 + MIR SINE MIR 8 261 -1 1601 181 0 52 chr10 11250943 11251253 -134338035 - AluJb SINE Alu -18 294 1 1333 197 114 62 chr10 11251542 11252003 -134337285 - MER66A LTR ERV1 0 478 97 309 337 8 32 chr10 11252065 11252222 -134337066 - MIR SINE MIR -66 142 1 463 349 96 0 chr10 11253574 11253772 -134335516 + MIR SINE MIR 25 241 -21 186 71 0 0 chr10 11253844 11253872 -134335416 + (T)n Simple_repeat Simple_repeat 1 28 0 2123 136 0 0 chr10 11255208 11255517 -134333771 + AluJb SINE Alu 1 309 -3 482 257 27 81 chr10 11256407 11256607 -134332681 + L2 LINE L2 2921 3105 -208 653 233 0 0 chr10 11256607 11256740 -134332548 - FLAM_C SINE Alu 0 133 1 482 257 27 81 chr10 11256740 11256800 -134332488 + L2 LINE L2 3105 3167 -146 189 224 41 0 chr10 11256920 11256969 -134332319 + L2 LINE L2 3262 3312 -1 593 242 26 13 chr10 11257529 11257682 -134331606 - MIR SINE MIR -3 259 105 2301 116 3 0 chr10 11257764 11258074 -134331214 - AluSq SINE Alu -2 311 1 2294 110 10 7 chr10 11259374 11259684 -134329604 - AluSx SINE Alu -1 311 1 429 310 155 14 chr10 11259867 11260080 -134329208 - MIR SINE MIR 0 262 20 33 25 0 0 chr10 11260578 11260618 -134328670 + AT_rich Low_complexity Low_complexity 1 40 0 5892 87 27 60 chr10 11263546 11264114 -134325174 + L1PB2 LINE L1 5255 5783 -368 180 0 0 0 chr10 11264114 11264134 -134325154 + (GA)n Simple_repeat Simple_repeat 2 21 0 5892 87 27 60 chr10 11264134 11264490 -134324798 + L1PB2 LINE L1 5783 6149 -2 343 293 154 35 chr10 11265610 11265869 -134323419 + L1ME3A LINE L1 5307 5596 -2212 409 291 110 0 chr10 11265889 11266143 -134323145 + L1ME3A LINE L1 5651 5932 -189 195 42 0 0 chr10 11266785 11266809 -134322479 + (TG)n Simple_repeat Simple_repeat 1 24 0 212 210 32 16 chr10 11267014 11267076 -134322212 + (TG)n Simple_repeat Simple_repeat 2 64 0 396 292 73 7 chr10 11267783 11267920 -134321368 - L2 LINE L2 -6 3307 3162 226 264 9 75 chr10 11267969 11268075 -134321213 - MLT1J2 LTR MaLR -50 400 302 262 255 49 0 chr10 11268496 11268598 -134320690 + (TAGA)n Simple_repeat Simple_repeat 3 109 0 1442 252 66 22 chr10 11268599 11269125 -134320163 - MLT2F LTR ERVL -60 603 9 299 287 61 77 chr10 11269148 11269329 -134319959 - L2 LINE L2 -188 3084 2907 657 299 57 30 chr10 11269339 11269561 -134319727 - MER90 LTR ERV1 -13 601 368 1782 162 114 11 chr10 11269561 11269912 -134319376 + MLT1B LTR MaLR 4 390 0 657 299 57 30 chr10 11269912 11269987 -134319301 - MER90 LTR ERV1 -246 368 296 1601 156 58 134 chr10 11270268 11270596 -134318692 + Charlie3 DNA MER1_type 37 2712 0 187 362 0 0 chr10 11270928 11270975 -134318313 + L2 LINE L2 3139 3185 -87 320 316 182 34 chr10 11271213 11271630 -134317658 - L2 LINE L2 -243 3029 2546 465 214 43 26 chr10 11271752 11271869 -134317419 + L1ME3A LINE L1 6051 6169 -1 198 290 21 11 chr10 11272938 11273031 -134316257 + MIR SINE MIR 60 153 -109 345 153 0 9 chr10 11273074 11273145 -134316143 + FAM SINE Alu 115 174 -1 2767 84 31 6 chr10 11273677 11274032 -134315256 + THE1B LTR MaLR 1 364 0 457 269 103 26 chr10 11275071 11275227 -134314061 - L2 LINE L2 -12 3301 3134 1041 188 0 0 chr10 11275277 11275437 -134313851 + FRAM SINE Alu 4 163 -3 2355 114 35 44 chr10 11277839 11278206 -134311082 - THE1B LTR MaLR 0 364 1 199 302 43 69 chr10 11278413 11278529 -134310759 + MIR SINE MIR 94 206 -56 222 261 90 27 chr10 11279400 11279511 -134309777 - MIR SINE MIR -110 152 35 303 93 0 0 chr10 11280223 11280266 -134309022 + (TG)n Simple_repeat Simple_repeat 2 44 0 457 68 27 0 chr10 11281049 11281123 -134308165 + (GA)n Simple_repeat Simple_repeat 2 77 0 212 278 0 44 chr10 11281362 11281452 -134307836 + GA-rich Low_complexity Low_complexity 2 87 0 354 80 0 0 chr10 11285137 11285187 -134304101 + (TG)n Simple_repeat Simple_repeat 1 50 0 346 208 87 54 chr10 11286305 11286454 -134302834 - MIR SINE MIR -28 234 81 23 0 0 0 chr10 11287275 11287298 -134301990 + AT_rich Low_complexity Low_complexity 1 23 0 196 261 43 0 chr10 11288703 11288749 -134300539 - L2 LINE L2 -20 3252 3205 210 246 18 18 chr10 11289057 11289114 -134300174 + GA-rich Low_complexity Low_complexity 1 57 0 203 260 0 0 chr10 11292608 11292658 -134296630 + (TATG)n Simple_repeat Simple_repeat 2 51 0 333 241 102 139 chr10 11293389 11293858 -134295430 - L1M2 LINE L1 -5842 1007 556 21 57 0 0 chr10 11293873 11293908 -134295380 + GC_rich Low_complexity Low_complexity 1 35 0 424 293 122 57 chr10 11294004 11294630 -134294658 - L1M2 LINE L1 -5446 1403 833 26 0 0 0 chr10 11297083 11297109 -134292179 + AT_rich Low_complexity Low_complexity 1 26 0 374 261 76 0 chr10 11297269 11297361 -134291927 - MIR3 SINE MIR -19 189 91 248 234 147 0 chr10 11297466 11297550 -134291738 - MIR SINE MIR -61 147 57 1877 134 14 0 chr10 11300143 11300420 -134288868 + AluSx SINE Alu 1 281 -31 252 59 0 0 chr10 11300428 11300462 -134288826 + (TAA)n Simple_repeat Simple_repeat 1 34 0 333 68 0 0 chr10 11301028 11301072 -134288216 + (TG)n Simple_repeat Simple_repeat 1 44 0 2183 156 24 24 chr10 11301103 11301476 -134287812 + THE1C LTR MaLR 3 375 0 190 121 30 30 chr10 11302423 11302456 -134286832 - L3 LINE CR1 -508 1069 1037 2451 90 0 3 chr10 11304227 11304538 -134284750 - AluSg SINE Alu 0 310 1 2031 129 27 7 chr10 11304538 11304833 -134284455 - AluSx SINE Alu -11 301 1 213 355 74 8 chr10 11306045 11306166 -134283122 - MIR SINE MIR -27 235 107 225 0 0 0 chr10 11307966 11307991 -134281297 + (A)n Simple_repeat Simple_repeat 1 25 0 473 217 0 11 chr10 11308155 11308247 -134281041 + FLAM_A SINE Alu 1 91 -51 2266 94 10 0 chr10 11309077 11309376 -134279912 - AluSp SINE Alu -11 302 1 471 254 25 8 chr10 11310780 11310898 -134278390 - MER94 DNA DNA -13 121 2 2517 118 31 11 chr10 11312867 11313223 -134276065 - THE1B LTR MaLR 0 364 2 22 0 0 0 chr10 11313660 11313682 -134275606 + AT_rich Low_complexity Low_complexity 1 22 0 272 257 14 14 chr10 11316420 11316490 -134272798 - L2 LINE L2 -1 3312 3243 21 89 0 0 chr10 11316608 11316664 -134272624 + AT_rich Low_complexity Low_complexity 1 56 0 1706 216 44 19 chr10 11316759 11317120 -134272168 - MLT1A2 LTR MaLR 0 374 5 2903 184 65 19 chr10 11318356 11318999 -134270289 - L1MB7 LINE L1 -31 6153 5481 214 267 129 30 chr10 11319025 11319126 -134270162 - MIR SINE MIR -67 141 31 1004 289 191 24 chr10 11319258 11320189 -134269099 + L2 LINE L2 2224 3308 -5 676 160 0 0 chr10 11320970 11321070 -134268218 - AluJo SINE Alu -15 297 198 741 201 0 15 chr10 11321086 11321220 -134268068 - AluJo SINE Alu -179 133 2 450 240 100 27 chr10 11321253 11321403 -134267885 + MIR SINE MIR 102 262 0 582 196 23 81 chr10 11321992 11322165 -134267123 - MER5A DNA MER1_type -26 163 1 213 237 0 34 chr10 11322183 11322242 -134267046 + L2 LINE L2 3246 3302 -11 321 252 19 10 chr10 11323193 11323296 -134265992 + MER103 DNA DNA 17 120 -46 189 244 0 0 chr10 11323327 11323368 -134265920 - MER5A DNA MER1_type -148 41 1 216 0 0 0 chr10 11325377 11325401 -134263887 + (A)n Simple_repeat Simple_repeat 1 24 0 333 311 120 58 chr10 11327358 11327599 -134261689 - L2 LINE L2 0 3272 3017 942 173 25 130 chr10 11327720 11328044 -134261244 - AluY SINE Alu -11 300 11 2620 59 0 0 chr10 11329427 11329732 -134259556 - AluY SINE Alu -6 305 1 187 174 0 87 chr10 11329967 11330013 -134259275 + MIR SINE MIR 221 262 0 369 43 0 0 chr10 11330294 11330341 -134258947 + (TG)n Simple_repeat Simple_repeat 2 48 0 1931 132 17 0 chr10 11330545 11330833 -134258455 - AluSx SINE Alu -19 293 1 191 288 0 34 chr10 11331384 11331443 -134257845 + L3 LINE CR1 1513 1569 -8 2342 95 0 19 chr10 11334268 11334584 -134254704 - AluSx SINE Alu 0 312 3 252 0 0 0 chr10 11334588 11334616 -134254672 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 1428 209 0 7 chr10 11334628 11334901 -134254387 - AluJo SINE Alu -41 271 1 190 308 67 29 chr10 11334903 11335007 -134254281 - MIR SINE MIR -119 143 36 13726 147 45 29 chr10 11336398 11337626 -134251662 + Tigger1 DNA MER2_type 1 1207 -1211 2074 113 3 7 chr10 11337626 11337917 -134251371 - AluSx SINE Alu -9 303 14 13726 147 45 29 chr10 11337917 11339065 -134250223 + Tigger1 DNA MER2_type 1207 2416 -2 180 259 0 35 chr10 11339262 11339320 -134249968 - MIR SINE MIR -2 260 205 280 330 19 28 chr10 11339577 11339683 -134249605 + MER5B DNA MER1_type 3 107 -71 600 247 79 82 chr10 11341491 11342008 -134247280 - L2 LINE L2 -70 3243 2722 372 308 81 19 chr10 11342141 11342352 -134246936 - MIR SINE MIR -25 237 14 431 304 38 22 chr10 11343545 11343691 -134245597 + MIR SINE MIR 8 154 -64 421 308 98 66 chr10 11343944 11344227 -134245061 - L2 LINE L2 -22 3291 3019 6155 190 82 26 chr10 11344227 11344380 -134244908 + Looper DNA T2_type 1 144 -1414 2486 70 0 0 chr10 11344380 11344678 -134244610 - AluY SINE Alu -13 298 1 6155 190 82 26 chr10 11344678 11346000 -134243288 + Looper DNA T2_type 144 1558 0 421 308 98 66 chr10 11346000 11346283 -134243005 - L2 LINE L2 -294 3019 2696 535 314 73 58 chr10 11346299 11346849 -134242439 - L2 LINE L2 -1005 2309 1752 581 208 52 32 chr10 11347124 11347278 -134242010 - MIR SINE MIR -59 203 47 265 214 57 14 chr10 11349354 11349424 -134239864 - MIR SINE MIR 0 262 190 475 296 123 6 chr10 11352760 11352922 -134236366 + MIR3 SINE MIR 6 186 -22 1965 133 91 28 chr10 11355206 11355559 -134233729 + THE1C LTR MaLR 1 375 0 487 234 168 24 chr10 11355879 11356046 -134233242 + MIR SINE MIR 16 206 -56 194 250 0 39 chr10 11356154 11356206 -134233082 + L2 LINE L2 3217 3266 -6 521 251 43 53 chr10 11358294 11358481 -134230807 + MIR3 SINE MIR 23 207 -1 485 327 75 9 chr10 11359504 11359718 -134229570 + MIR SINE MIR 13 240 -22 397 331 82 6 chr10 11361026 11361180 -134228108 - MIR3 SINE MIR -35 173 5 489 233 128 23 chr10 11361330 11361502 -134227786 - MIR SINE MIR -46 216 27 425 215 28 19 chr10 11361734 11361841 -134227447 + MIR SINE MIR 109 216 -46 288 0 0 0 chr10 11362397 11362429 -134226859 + (A)n Simple_repeat Simple_repeat 1 32 0 186 346 0 0 chr10 11363816 11363868 -134225420 - L2 LINE L2 -21 3292 3241 246 388 70 22 chr10 11364059 11364371 -134224917 - L2 LINE L2 -338 2976 2650 1277 252 88 39 chr10 11364492 11365076 -134224212 - MLT1G LTR MaLR -13 577 1 3125 145 21 15 chr10 11365496 11366019 -134223269 + L1PA16 LINE L1 5641 6166 0 425 287 0 0 chr10 11366404 11366519 -134222769 + L1ME LINE L1 5706 5820 -301 1316 223 97 5 chr10 11367610 11367991 -134221297 - LTR37B LTR ERV1 0 468 53 896 185 209 24 chr10 11368215 11368469 -134220819 - MER39 LTR ERV1 0 707 407 374 241 92 52 chr10 11368439 11368613 -134220675 - MER34 LTR ERV1 -295 247 67 * 27 29 0 0 chr10 11369206 11369240 -134220048 + AT_rich Low_complexity Low_complexity 1 34 0 189 74 0 0 chr10 11375703 11375730 -134213558 + (A)n Simple_repeat Simple_repeat 1 27 0 1926 129 0 11 chr10 11375737 11376063 -134213225 + AluSx SINE Alu 1 323 0 349 88 35 0 chr10 11376196 11376253 -134213035 - L1PB2 LINE L1 -2 6149 6091 640 316 53 32 chr10 11376881 11377258 -134212030 - L2 LINE L2 -780 2534 2150 190 312 233 20 chr10 11378614 11378867 -134210421 + L2 LINE L2 2450 2756 -558 187 263 35 35 chr10 11379079 11379136 -134210152 + L2 LINE L2 2992 3048 -224 180 0 0 0 chr10 11379306 11379326 -134209962 + (T)n Simple_repeat Simple_repeat 1 20 0 364 270 32 40 chr10 11379327 11379453 -134209835 + MIR SINE MIR 81 205 -57 1596 184 32 0 chr10 11380234 11380512 -134208776 + AluJb SINE Alu 8 294 -18 504 288 34 77 chr10 11381029 11381262 -134208026 + MIR SINE MIR 15 237 -25 2111 130 0 7 chr10 11382005 11382355 -134206933 - AluSx SINE Alu 0 312 1 201 230 22 37 chr10 11383600 11383735 -134205553 + CT-rich Low_complexity Low_complexity 1 133 0 296 185 0 37 chr10 11383821 11383929 -134205359 + CT-rich Low_complexity Low_complexity 2 105 0 493 254 136 18 chr10 11384470 11384749 -134204539 - L1M2 LINE L1 -732 5565 5254 255 316 76 41 chr10 11385266 11385437 -134203851 - MIR3 SINE MIR -14 194 18 1720 156 0 49 chr10 11385795 11386103 -134203185 + AluJo SINE Alu 1 293 -19 285 253 10 50 chr10 11390748 11390847 -134198441 + L2 LINE L2 3219 3313 0 871 305 28 0 chr10 11392673 11392922 -134196366 - MIR SINE MIR -5 257 2 258 298 164 0 chr10 11393056 11393160 -134196128 + MIR SINE MIR 34 154 -108 704 152 0 18 chr10 11394174 11394286 -134195002 - FLAM_C SINE Alu -32 111 2 275 305 38 23 chr10 11394350 11394475 -134194813 - MIR SINE MIR -51 157 39 289 252 96 26 chr10 11394638 11394753 -134194535 + MIR SINE MIR 24 146 -62 27 62 0 0 chr10 11395415 11395463 -134193825 + AT_rich Low_complexity Low_complexity 1 48 0 256 264 47 9 chr10 11395709 11395815 -134193473 - L1MB8 LINE L1 -12 6166 6057 196 289 0 40 chr10 11395910 11395986 -134193302 - L2 LINE L2 -1 3271 3199 386 258 77 33 chr10 11397306 11397488 -134191800 - L2 LINE L2 -5 3308 3119 1987 143 3 16 chr10 11399053 11399368 -134189920 - AluJo SINE Alu -1 311 1 2501 108 40 3 chr10 11399695 11400046 -134189242 - THE1B LTR MaLR 0 364 1 388 356 8 0 chr10 11400450 11400568 -134188720 - L2 LINE L2 -3 3269 3151 16540 55 11 0 chr10 11402718 11406077 -134183211 - L1PA6 LINE L1 -1 6153 2766 265 275 61 30 chr10 11410379 11410510 -134178778 + L2 LINE L2 3137 3271 -1 279 293 24 49 chr10 11411624 11411747 -134177541 + MER5A DNA MER1_type 7 126 -63 308 289 10 10 chr10 11411801 11411898 -134177390 - L2 LINE L2 -3 3269 3173 2139 114 3 13 chr10 11412139 11412466 -134176822 + AluSq SINE Alu 1 313 0 24 0 0 0 chr10 11412617 11412641 -134176647 + AT_rich Low_complexity Low_complexity 1 24 0 278 315 11 0 chr10 11412841 11412930 -134176358 + (TATATG)n Simple_repeat Simple_repeat 6 95 0 393 300 110 13 chr10 11413231 11413468 -134175820 + MIR SINE MIR 3 262 0 874 177 6 12 chr10 11416056 11416220 -134173068 - FRAM SINE Alu 0 166 4 1745 171 7 7 chr10 11416552 11416845 -134172443 + AluJo SINE Alu 1 293 -19 222 299 26 13 chr10 11416877 11416954 -134172334 - L2 LINE L2 -2 3311 3234 180 0 0 0 chr10 11418209 11418229 -134171059 + (GGCTG)n Simple_repeat Simple_repeat 3 22 0 2409 61 3 3 chr10 11418229 11418522 -134170766 + AluY SINE Alu 9 301 -10 21 0 0 0 chr10 11420399 11420420 -134168868 + AT_rich Low_complexity Low_complexity 1 21 0 2054 145 7 0 chr10 11420430 11420740 -134168548 + AluJb SINE Alu 1 312 0 279 0 0 0 chr10 11424662 11424693 -134164595 + (CA)n Simple_repeat Simple_repeat 2 32 0 2033 148 3 0 chr10 11424891 11425188 -134164100 - AluSx SINE Alu -14 298 1 230 355 100 0 chr10 11428125 11428235 -134161053 + L2 LINE L2 3147 3267 -5 360 276 112 45 chr10 11432217 11432485 -134156803 + L2 LINE L2 3028 3313 0 272 347 40 8 chr10 11433386 11433510 -134155778 + L2 LINE L2 3127 3254 -18 465 296 80 0 chr10 11435993 11436155 -134153133 - MIR3 SINE MIR -4 204 30 486 179 250 0 chr10 11436313 11436425 -134152863 - MER3 DNA MER1_type -46 163 24 190 294 0 15 chr10 11437417 11437485 -134151803 + L2 LINE L2 3239 3305 -8 180 162 27 0 chr10 11438697 11438734 -134150554 - MIR SINE MIR -114 148 111 181 307 200 0 chr10 11442592 11442667 -134146621 + MIR3 SINE MIR 111 200 -8 25 0 0 0 chr10 11443084 11443109 -134146179 + AT_rich Low_complexity Low_complexity 1 25 0 641 274 28 14 chr10 11443576 11443788 -134145500 - MIR SINE MIR -14 248 34 304 324 9 19 chr10 11444797 11444902 -134144386 + MIR SINE MIR 6 109 -153 235 333 0 0 chr10 11451638 11451701 -134137587 - L2 LINE L2 -24 3248 3186 199 296 0 0 chr10 11452417 11452471 -134136817 + MIR SINE MIR 200 253 -9 183 234 85 0 chr10 11454818 11454865 -134134423 - MIR SINE MIR -112 150 100 199 329 27 0 chr10 11455400 11455473 -134133815 - L2 LINE L2 -4 3268 3194 254 314 160 0 chr10 11456101 11456295 -134132993 + MIR SINE MIR 2 226 -36 462 276 6 49 chr10 11456478 11456641 -134132647 - MIR SINE MIR 0 262 107 1971 135 4 0 chr10 11456686 11456988 -134132300 - AluSq SINE Alu 0 303 1 188 300 67 0 chr10 11457185 11457245 -134132043 + L2 LINE L2 3200 3263 -9 724 239 0 0 chr10 11458772 11458788 -134130500 - L1MA10 LINE L1 -1 6333 6318 8657 234 67 58 chr10 11458788 11460993 -134128295 - L1ME1 LINE L1 -8 6227 4045 1010 187 0 0 chr10 11460993 11461159 -134128129 - FRAM SINE Alu -12 164 1 8657 234 67 58 chr10 11461159 11461251 -134128037 - L1ME1 LINE L1 -2190 4045 3955 2139 110 4 0 chr10 11461251 11461532 -134127756 - AluSp SINE Alu -31 282 1 8657 234 67 58 chr10 11461532 11462436 -134126852 - L1ME1 LINE L1 -2280 3955 3061 1212 161 63 5 chr10 11462436 11462659 -134126629 + MER46A DNA MER2_type 1 236 0 8657 234 67 58 chr10 11462659 11463935 -134125353 - L1ME1 LINE L1 -3174 3061 1555 2299 91 3 0 chr10 11463935 11464221 -134125067 - AluSp SINE Alu -24 289 3 8657 234 67 58 chr10 11464221 11464909 -134124379 - L1ME1 LINE L1 -4680 1555 875 487 250 215 10 chr10 11464890 11465090 -134124198 - L1ME1 LINE L1 -5766 630 390 * 738 236 31 24 chr10 11465076 11465333 -134123955 - L1MEc LINE L1 -3814 2438 2183 445 240 164 0 chr10 11465355 11465501 -134123787 - L1ME1 LINE L1 -6013 383 214 243 0 0 0 chr10 11466594 11466621 -134122667 + (A)n Simple_repeat Simple_repeat 1 27 0 929 209 15 5 chr10 11466630 11466836 -134122452 + L1MB3 LINE L1 5911 6118 -65 184 211 58 0 chr10 11466906 11466958 -134122330 + MIR SINE MIR 91 145 -117 457 285 55 30 chr10 11468558 11468723 -134120565 - MER5B DNA MER1_type -3 175 7 2420 93 0 0 chr10 11469878 11470180 -134119108 - AluSc SINE Alu -7 302 1 1434 154 75 19 chr10 11472196 11472463 -134116825 + AluJo SINE Alu 1 282 -30 207 69 0 0 chr10 11472466 11472495 -134116793 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 2248 77 0 11 chr10 11472495 11472913 -134116375 + AluSg SINE Alu 4 418 0 442 311 29 66 chr10 11476966 11477207 -134112081 - MLT1J2 LTR MaLR -118 332 101 459 0 0 0 chr10 11478533 11478584 -134110704 + (TC)n Simple_repeat Simple_repeat 2 52 0 189 0 0 0 chr10 11478583 11478604 -134110684 + (TG)n Simple_repeat Simple_repeat 2 22 0 * 299 321 18 0 chr10 11479657 11479769 -134109519 - MER94 DNA DNA -19 115 2 3340 152 27 55 chr10 11483928 11484599 -134104689 - MER39B LTR ERV1 0 653 2 544 153 0 10 chr10 11486556 11486654 -134102634 + L1MA4A LINE L1 6207 6303 0 1481 204 7 14 chr10 11486709 11487003 -134102285 + AluJo SINE Alu 1 292 -20 393 158 0 0 chr10 11487468 11487569 -134101719 + (TG)n Simple_repeat Simple_repeat 2 102 0 189 0 0 0 chr10 11488450 11488471 -134100817 + (T)n Simple_repeat Simple_repeat 1 21 0 1698 167 17 10 chr10 11489714 11490007 -134099281 + AluJo SINE Alu 1 295 -17 420 354 13 0 chr10 11490146 11490304 -134098984 + MER91A DNA MER1_type 15 174 -22 302 282 0 13 chr10 11498511 11498589 -134090699 - L2 LINE L2 0 3313 3237 297 314 41 59 chr10 11502759 11502917 -134086371 - MIR SINE MIR -62 146 31 387 0 0 0 chr10 11503183 11503226 -134086062 + (CA)n Simple_repeat Simple_repeat 1 43 0 225 263 95 21 chr10 11504993 11505088 -134084200 - MIR SINE MIR -2 260 159 243 0 0 0 chr10 11505456 11505483 -134083805 + (A)n Simple_repeat Simple_repeat 1 27 0 452 263 39 58 chr10 11505754 11505910 -134083378 - MIR3 SINE MIR -35 173 21 736 178 33 44 chr10 11506396 11506517 -134082771 + MER5B DNA MER1_type 1 121 -57 1999 124 24 0 chr10 11506517 11506808 -134082480 - AluSx SINE Alu -14 298 1 736 178 33 44 chr10 11506808 11506866 -134082422 + MER5B DNA MER1_type 121 178 0 285 207 23 58 chr10 11507011 11507098 -134082190 + MER5A DNA MER1_type 31 114 -75 505 192 75 11 chr10 11507109 11507235 -134082053 + L1MA9 LINE L1 6152 6288 -3 956 128 19 162 chr10 11508719 11508985 -134080303 - LOR1-int LTR ERV1 -3623 4497 4270 2028 25 0 0 chr10 11508999 11509235 -134080053 - L1PA4 LINE L1 -2 6153 5918 363 336 52 19 chr10 11510362 11510573 -134078715 + L2 LINE L2 2105 2322 -992 259 304 0 14 chr10 11511278 11511347 -134077941 + L2 LINE L2 3204 3271 -1 2341 66 7 0 chr10 11511406 11511707 -134077581 + AluY SINE Alu 1 303 -8 389 340 58 5 chr10 11511927 11512123 -134077165 - MIR SINE MIR -41 221 16 203 152 22 0 chr10 11512127 11512173 -134077115 + A-rich Low_complexity Low_complexity 2 48 0 264 184 0 103 chr10 11513659 11513746 -134075542 + MER116 DNA Mariner 3 80 0 207 375 109 3 chr10 11513901 11514186 -134075102 - L2 LINE L2 -448 2866 2552 322 175 0 0 chr10 11514876 11514933 -134074355 - MADE1 DNA Mariner -23 57 1 189 0 0 0 chr10 11516179 11516200 -134073088 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 1840 112 29 4 chr10 11516785 11517063 -134072225 + AluSq SINE Alu 6 290 -23 432 174 20 10 chr10 11517927 11518025 -134071263 + MIR SINE MIR 39 137 -125 2013 134 0 0 chr10 11518207 11518499 -134070789 - AluSx SINE Alu -20 292 1 2272 70 0 20 chr10 11521371 11521672 -134067616 + AluY SINE Alu 1 295 -16 214 355 59 67 chr10 11521692 11522083 -134067205 + L2 LINE L2 2853 3240 -32 275 303 133 30 chr10 11522890 11523055 -134066233 + MIR3 SINE MIR 4 185 -23 212 186 17 0 chr10 11525408 11525467 -134063821 + CT-rich Low_complexity Low_complexity 2 61 0 27 0 0 0 chr10 11525621 11525648 -134063640 + AT_rich Low_complexity Low_complexity 1 27 0 573 282 60 13 chr10 11525701 11525850 -134063438 - MIR SINE MIR -50 212 57 241 241 56 0 chr10 11525880 11525934 -134063354 - MIR SINE MIR -188 74 18 589 192 75 0 chr10 11527233 11527353 -134061935 + FLAM_A SINE Alu 8 136 -6 242 297 0 0 chr10 11527548 11527612 -134061676 - L2 LINE L2 -21 3292 3229 185 275 94 56 chr10 11527693 11527853 -134061435 + MIR SINE MIR 97 262 0 261 0 0 0 chr10 11528354 11528383 -134060905 + (T)n Simple_repeat Simple_repeat 1 29 0 557 257 28 110 chr10 11528685 11528903 -134060385 + MIR SINE MIR 46 245 -17 221 0 0 33 chr10 11530994 11531024 -134058264 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 216 235 0 0 chr10 11531961 11532029 -134057259 + CT-rich Low_complexity Low_complexity 1 68 0 347 336 22 0 chr10 11532849 11532983 -134056305 - MIR3 SINE MIR -52 156 20 365 179 64 0 chr10 11533253 11533331 -134055957 - Charlie5 DNA MER1_type -2503 109 27 21 0 0 0 chr10 11533657 11533678 -134055610 + AT_rich Low_complexity Low_complexity 1 21 0 838 311 135 39 chr10 11537499 11538037 -134051251 - L3 LINE CR1 -214 1363 761 189 0 0 0 chr10 11538037 11538058 -134051230 + (TG)n Simple_repeat Simple_repeat 2 22 0 838 311 135 39 chr10 11538058 11538111 -134051177 - L3 LINE CR1 -816 761 715 330 267 81 34 chr10 11538135 11538338 -134050950 - MIR SINE MIR -26 236 18 299 247 43 54 chr10 11538365 11538458 -134050830 + L2 LINE L2 3220 3311 -2 686 328 109 40 chr10 11538531 11538927 -134050361 - L3 LINE CR1 -1082 495 73 21 0 0 0 chr10 11539224 11539245 -134050043 + AT_rich Low_complexity Low_complexity 1 21 0 1987 155 3 18 chr10 11539521 11539863 -134049425 + MER1B DNA MER1_type 1 337 0 1908 133 0 37 chr10 11540032 11540355 -134048933 - AluSx SINE Alu -1 311 1 24 32 0 0 chr10 11543060 11543091 -134046197 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr10 11543455 11543477 -134045811 + AT_rich Low_complexity Low_complexity 1 22 0 351 0 0 0 chr10 11546477 11546516 -134042772 + (A)n Simple_repeat Simple_repeat 1 39 0 514 184 0 10 chr10 11547068 11547166 -134042122 - FLAM_A SINE Alu -11 131 35 22 0 0 0 chr10 11548429 11548451 -134040837 + AT_rich Low_complexity Low_complexity 1 22 0 1919 100 4 0 chr10 11550469 11550738 -134038550 + AluSc SINE Alu 1 270 -39 204 67 0 0 chr10 11603849 11603879 -133985409 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 31 0 0 0 chr10 11607588 11607619 -133981669 + AT_rich Low_complexity Low_complexity 1 31 0 189 0 0 0 chr10 11608017 11608038 -133981250 + (ATTG)n Simple_repeat Simple_repeat 3 23 0 536 266 130 11 chr10 11612173 11612357 -133976931 + MIR SINE MIR 4 209 -53 415 248 50 8 chr10 11613286 11613407 -133975881 + L2 LINE L2 3136 3261 -11 186 302 94 19 chr10 11614087 11614193 -133975095 - L2 LINE L2 0 3313 3200 489 204 148 28 chr10 11615481 11615623 -133973665 + MIR SINE MIR 13 171 -91 361 296 77 18 chr10 11617926 11618095 -133971193 - MIR SINE MIR -16 246 68 333 199 244 23 chr10 11619235 11619366 -133969922 + MER53 DNA DNA 23 182 -7 * 455 164 109 18 chr10 11619272 11619382 -133969906 - MER53 DNA DNA -69 120 1 1163 203 135 34 chr10 11619699 11620088 -133969200 - MER66A LTR ERV1 -50 445 97 1945 158 11 29 chr10 11620126 11620409 -133968879 - MER66A-int LTR ERV1 0 6676 6399 2366 95 7 0 chr10 11620409 11620705 -133968583 + AluSp SINE Alu 4 301 -12 1945 158 11 29 chr10 11620705 11620770 -133968518 - MER66A-int LTR ERV1 -277 6399 6334 971 180 71 38 chr10 11620864 11621075 -133968213 - MER66A-int LTR ERV1 -1848 4828 4611 476 194 78 10 chr10 11621163 11621266 -133968022 - MER4D LTR ERV1 -711 161 52 8033 190 94 66 chr10 11621266 11621633 -133967655 - MER66A-int LTR ERV1 -2239 4437 4082 2339 113 19 19 chr10 11621633 11621997 -133967291 - THE1B LTR MaLR 0 364 1 8033 190 94 66 chr10 11621997 11623677 -133965611 - MER66A-int LTR ERV1 -2594 4082 2333 7728 203 68 43 chr10 11623662 11624211 -133965077 - MER66A-int LTR ERV1 -4507 2169 1635 * 1721 171 20 7 chr10 11624211 11624504 -133964784 - AluJo SINE Alu -15 297 1 7728 203 68 43 chr10 11624504 11625371 -133963917 - MER66A-int LTR ERV1 -5041 1635 690 1668 172 59 0 chr10 11625371 11625644 -133963644 + AluSg SINE Alu 1 289 -21 7728 203 68 43 chr10 11625644 11626151 -133963137 - MER66A-int LTR ERV1 -5986 690 197 1480 178 93 77 chr10 11626327 11626794 -133962494 - MER66A LTR ERV1 0 478 97 228 250 0 0 chr10 11627019 11627071 -133962217 + MIR SINE MIR 72 123 -139 592 152 163 20 chr10 11627412 11627584 -133961704 + MER66A LTR ERV1 97 217 -261 378 42 0 0 chr10 11627990 11628038 -133961250 + (TG)n Simple_repeat Simple_repeat 2 49 0 2151 146 0 3 chr10 11628428 11628737 -133960551 - AluSx SINE Alu -4 308 1 182 323 62 21 chr10 11628879 11628975 -133960313 - L2 LINE L2 -15 3298 3199 26 0 0 0 chr10 11629924 11629950 -133959338 + AT_rich Low_complexity Low_complexity 1 26 0 779 196 0 7 chr10 11630211 11630359 -133958929 - MLT1D LTR MaLR 0 505 359 228 318 47 64 chr10 11630416 11630560 -133958728 + L1MD1 LINE L1 5506 5646 -2162 2285 116 0 0 chr10 11630560 11630861 -133958427 + AluSx SINE Alu 1 301 -11 228 318 47 64 chr10 11630861 11630952 -133958336 + L1MD1 LINE L1 5646 5737 -2071 1669 165 62 24 chr10 11630966 11631257 -133958031 + AluJo SINE Alu 1 302 -10 474 287 126 18 chr10 11631586 11631809 -133957479 + MIR SINE MIR 16 262 0 194 298 134 72 chr10 11631813 11632075 -133957213 - L2 LINE L2 -349 2965 2688 1768 193 63 30 chr10 11632075 11632501 -133956787 + L1MD1 LINE L1 5803 6242 0 2011 179 6 6 chr10 11632893 11633256 -133956032 + MLT1A1 LTR MaLR 3 365 0 287 266 84 59 chr10 11634410 11634613 -133954675 + MLT1J LTR MaLR 201 408 -103 216 111 0 0 chr10 11634638 11634674 -133954614 + (GGAA)n Simple_repeat Simple_repeat 2 37 0 290 289 112 48 chr10 11634753 11634789 -133954499 + L1ME4a LINE L1 5700 5732 -389 2107 119 0 17 chr10 11634789 11635084 -133954204 + AluSx SINE Alu 1 290 -22 290 289 112 48 chr10 11635084 11635234 -133954054 + L1ME4a LINE L1 5732 5898 -223 1875 159 43 0 chr10 11635238 11635564 -133953724 - MER47A DNA MER2_type 0 366 27 238 188 101 14 chr10 11635645 11635714 -133953574 + L1ME4a LINE L1 5951 6025 -96 2281 115 0 3 chr10 11636652 11636956 -133952332 - AluSq SINE Alu -10 303 1 3955 152 20 83 chr10 11637838 11637921 -133951367 + LTR39 LTR ERV1 1 88 -695 2166 122 3 0 chr10 11637921 11638215 -133951073 + AluSx SINE Alu 1 295 -17 3955 152 20 83 chr10 11638215 11638608 -133950680 + LTR39 LTR ERV1 88 408 -375 2255 109 0 6 chr10 11638608 11638919 -133950369 - AluSx SINE Alu -3 309 1 3955 152 20 83 chr10 11638919 11639246 -133950042 + LTR39 LTR ERV1 408 754 -29 229 402 10 0 chr10 11641304 11641406 -133947882 + L2 LINE L2 2691 2793 -521 952 205 29 9 chr10 11641677 11641887 -133947401 + MER41B LTR ERV1 422 635 0 226 295 90 0 chr10 11641960 11642082 -133947206 - MIR SINE MIR -66 142 19 2553 111 53 5 chr10 11642241 11642656 -133946632 + LTR49 LTR ERV1 1 435 -160 789 168 81 23 chr10 11643047 11643220 -133946068 + LTR49 LTR ERV1 413 595 0 2253 116 0 3 chr10 11643555 11643856 -133945432 + AluSx SINE Alu 1 300 -12 1293 132 182 23 chr10 11643918 11644176 -133945112 + AluJb SINE Alu 2 300 -2 2363 121 0 0 chr10 11644824 11645137 -133944151 - AluSq SINE Alu 0 313 1 1669 171 3 39 chr10 11645139 11645448 -133943840 - AluJo SINE Alu -9 303 6 2268 131 0 0 chr10 11645618 11645930 -133943358 - AluSx SINE Alu 0 312 1 609 274 248 20 chr10 11645985 11646169 -133943119 + L2 LINE L2 2044 2185 -1129 1755 189 7 0 chr10 11646169 11646465 -133942823 - AluJo SINE Alu -14 298 1 609 274 248 20 chr10 11646465 11646593 -133942695 + L2 LINE L2 2185 2283 -1031 2034 148 3 0 chr10 11646593 11646890 -133942398 + AluSx SINE Alu 1 298 -14 609 274 248 20 chr10 11646890 11647076 -133942212 + L2 LINE L2 2283 2657 -657 187 207 86 167 chr10 11647125 11647323 -133941965 + L2 LINE L2 2889 3070 -243 376 250 59 52 chr10 11647353 11647489 -133941799 + MER63 DNA MER1_type 1 763 -73 225 240 17 137 chr10 11647529 11647704 -133941584 + L2 LINE L2 3106 3259 -54 226 280 20 0 chr10 11647706 11647756 -133941532 + MER58A DNA MER1_type 1 51 -173 389 168 0 10 chr10 11647763 11647831 -133941457 - FLAM_A SINE Alu -11 122 66 329 140 0 18 chr10 11647988 11648045 -133941243 - FLAM_A SINE Alu -71 61 6 740 250 44 0 chr10 11648046 11648226 -133941062 + MER58A DNA MER1_type 37 224 0 268 167 0 0 chr10 11648235 11648283 -133941005 + L2 LINE L2 3263 3310 -3 228 162 0 0 chr10 11648336 11648373 -133940915 - MLT1A1 LTR MaLR 0 374 338 1094 151 6 45 chr10 11648373 11648552 -133940736 + FAM SINE Alu 1 172 -13 1403 205 33 45 chr10 11648552 11648889 -133940399 - MLT1A1 LTR MaLR -32 333 1 352 327 39 6 chr10 11649105 11649261 -133940027 - MIR SINE MIR -79 183 23 2349 117 0 9 chr10 11649741 11650057 -133939231 - AluSq SINE Alu 0 313 1 390 213 11 21 chr10 11650268 11650362 -133938926 - MER5B DNA MER1_type -85 93 1 213 211 0 58 chr10 11650362 11650397 -133938891 - MIR3 SINE MIR -51 157 126 438 254 50 40 chr10 11650721 11650871 -133938417 + MIR SINE MIR 39 188 -49 289 349 0 0 chr10 11650973 11651082 -133938206 - MIR SINE MIR -69 139 31 2366 106 0 6 chr10 11651179 11651491 -133937797 - AluSg SINE Alu 0 310 1 1001 23 78 0 chr10 11652010 11652138 -133937150 - MER85 DNA T2_type -1 138 1 233 265 15 0 chr10 11652305 11652373 -133936915 + MIR SINE MIR 76 144 -64 221 306 54 18 chr10 11652642 11652753 -133936535 - L2 LINE L2 -509 2805 2691 402 244 0 0 chr10 11653609 11653687 -133935601 + MER21B LTR ERV1 13 90 -773 1921 216 91 93 chr10 11653709 11653946 -133935342 + MER21B LTR ERV1 19 255 -608 1477 200 11 0 chr10 11653946 11654211 -133935077 + AluJb SINE Alu 16 283 -29 1921 216 91 93 chr10 11654211 11654750 -133934538 + MER21B LTR ERV1 255 794 -69 234 359 114 5 chr10 11654917 11655101 -133934187 + L3 LINE CR1 1303 1506 -71 321 300 36 36 chr10 11655160 11655300 -133933988 + MIR3 SINE MIR 42 181 -27 1843 183 7 13 chr10 11655300 11655600 -133933688 - AluJb SINE Alu -14 298 1 1196 192 9 18 chr10 11656952 11657171 -133932117 - AluJo SINE Alu -95 217 1 1555 206 44 3 chr10 11657199 11657538 -133931750 - MLT1A1 LTR MaLR 0 365 13 2076 130 33 25 chr10 11658286 11658647 -133930641 - THE1B LTR MaLR 0 364 1 2221 115 7 0 chr10 11660078 11660374 -133928914 - AluSx SINE Alu -14 298 1 252 209 77 11 chr10 11661768 11661859 -133927429 + GA-rich Low_complexity Low_complexity 1 97 0 2273 118 0 3 chr10 11661895 11662209 -133927079 + AluSq SINE Alu 1 313 0 4057 143 9 6 chr10 11663221 11663872 -133925416 + MER39B LTR ERV1 1 653 0 2128 77 46 82 chr10 11664165 11664393 -133924895 + L1MA2 LINE L1 5927 6137 -167 2148 131 3 0 chr10 11664393 11664684 -133924604 + AluSx SINE Alu 1 292 -20 2128 77 46 82 chr10 11664684 11664847 -133924441 + L1MA2 LINE L1 6137 6304 0 2233 128 32 11 chr10 11664939 11665315 -133923973 - MLT1B LTR MaLR -4 386 3 1855 135 44 101 chr10 11665358 11665565 -133923723 - THE1B LTR MaLR 0 364 188 2344 119 0 0 chr10 11665565 11665877 -133923411 + AluSq SINE Alu 1 312 -1 1855 135 44 101 chr10 11665877 11666055 -133923233 - THE1B LTR MaLR -176 188 1 5155 102 10 0 chr10 11667064 11667776 -133921512 + LTR30 LTR ERV1 2 720 -2 1991 126 7 10 chr10 11667776 11668100 -133921188 + AluSx SINE Alu 10 332 0 214 167 0 0 chr10 11668303 11668339 -133920949 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 256 241 218 30 chr10 11669794 11669927 -133919361 + MIR3 SINE MIR 10 167 -41 316 224 17 60 chr10 11671564 11671680 -133917608 - L2 LINE L2 -177 3095 2985 532 227 81 86 chr10 11671973 11672204 -133917084 - L1MC5 LINE L1 -60 7901 7670 2256 118 0 0 chr10 11672204 11672500 -133916788 + AluSx SINE Alu 2 297 -15 532 227 81 86 chr10 11672500 11673204 -133916084 - L1MC5 LINE L1 -291 7670 6780 416 363 18 6 chr10 11673341 11673509 -133915779 + MIR SINE MIR 24 193 -69 379 385 0 6 chr10 11674174 11674411 -133914877 + (TG)n Simple_repeat Simple_repeat 1 235 0 2079 154 59 77 chr10 11675626 11675845 -133913443 + MER31A LTR ERV1 1 222 -263 3421 121 31 13 chr10 11675845 11676398 -133912890 + L1MA2 LINE L1 5741 6303 -1 2079 154 59 77 chr10 11676398 11676672 -133912616 + MER31A LTR ERV1 222 485 0 7926 21 0 0 chr10 11676847 11677965 -133911323 + L1PA3 LINE L1 5038 6155 0 1065 163 102 0 chr10 11678865 11679061 -133910227 - AluJo SINE Alu -10 302 87 214 184 20 0 chr10 11679166 11679215 -133910073 + GA-rich Low_complexity Low_complexity 1 50 0 745 149 51 93 chr10 11679502 11679577 -133909711 + ORSL DNA AcHobo 42 119 -156 1764 132 106 0 chr10 11679577 11679842 -133909446 - AluSx SINE Alu -19 293 1 745 149 51 93 chr10 11679842 11679980 -133909308 + ORSL DNA AcHobo 119 246 -29 709 249 24 6 chr10 11680014 11680179 -133909109 + MER5B DNA MER1_type 8 175 -3 2134 143 13 28 chr10 11680474 11680521 -133908767 - L1MB3 LINE L1 -28 6155 6109 2388 133 34 0 chr10 11680521 11680873 -133908415 + THE1B LTR MaLR 1 364 0 2134 143 13 28 chr10 11680873 11681218 -133908070 - L1MB3 LINE L1 -74 6109 5769 291 268 42 0 chr10 11681224 11681295 -133907993 + L2 LINE L2 3216 3289 -24 1803 195 0 0 chr10 11681819 11682116 -133907172 - AluJo SINE Alu -8 304 8 892 201 6 11 chr10 11682173 11682352 -133906936 - AluJo SINE Alu -91 221 44 201 209 47 0 chr10 11683208 11683251 -133906037 + (CATG)n Simple_repeat Simple_repeat 3 47 0 24 0 0 0 chr10 11683332 11683356 -133905932 + AT_rich Low_complexity Low_complexity 1 24 0 3422 176 39 41 chr10 11684023 11684642 -133904646 + L1 LINE L1 4513 5130 -1038 2171 133 0 0 chr10 11684642 11684957 -133904331 + AluSx SINE Alu 1 315 0 3422 176 39 41 chr10 11684957 11685254 -133904034 + L1 LINE L1 5130 5426 -742 300 235 0 29 chr10 11685256 11685324 -133903964 - L1ME LINE L1 -287 5834 5769 633 221 61 22 chr10 11685334 11685515 -133903773 + LTR41 LTR ERVL 1 188 -585 252 265 8 51 chr10 11685926 11686043 -133903245 + LTR41 LTR ERVL 656 767 -6 1176 100 0 0 chr10 11686242 11686392 -133902896 - AluSg/x SINE Alu -9 301 152 303 327 73 27 chr10 11686402 11686552 -133902736 - MIR SINE MIR -63 199 43 534 251 121 103 chr10 11687070 11687277 -133902011 + MLT1J LTR MaLR 6 208 -303 2475 86 3 0 chr10 11687277 11687578 -133901710 - AluSg SINE Alu -8 302 1 534 251 121 103 chr10 11687578 11687865 -133901423 + MLT1J LTR MaLR 208 509 -2 430 278 28 45 chr10 11687909 11688085 -133901203 + MIR SINE MIR 35 207 -55 366 234 170 18 chr10 11688517 11688688 -133900600 + MIR SINE MIR 44 240 -22 4162 156 17 57 chr10 11688693 11689009 -133900279 + L1MCa LINE L1 202 529 -5897 1662 151 80 37 chr10 11689009 11689056 -133900232 + MER47A DNA MER2_type 1 45 -2278 2309 112 0 13 chr10 11689056 11689370 -133899918 - AluSx SINE Alu -2 310 1 1662 151 80 37 chr10 11689370 11689673 -133899615 + MER47A DNA MER2_type 45 366 0 4162 156 17 57 chr10 11689673 11690134 -133899154 + L1MCa LINE L1 529 943 -5483 1933 117 32 58 chr10 11690134 11690442 -133898846 + AluSq SINE Alu 1 300 -13 4162 156 17 57 chr10 11690442 11690542 -133898746 + L1MCa LINE L1 943 1045 -5381 2266 166 29 45 chr10 11690536 11690751 -133898537 + L1MCa LINE L1 1713 1930 -4496 * 2217 117 0 13 chr10 11690751 11691050 -133898238 - AluSq SINE Alu -18 295 1 2266 166 29 45 chr10 11691050 11691066 -133898222 + L1MCa LINE L1 1930 1945 -4481 2224 112 7 3 chr10 11691066 11691360 -133897928 - AluSq SINE Alu -18 295 1 2266 166 29 45 chr10 11691360 11691615 -133897673 + L1MCa LINE L1 1945 2192 -4234 8077 240 33 18 chr10 11691619 11691863 -133897425 + L1MCa LINE L1 2278 2517 -3909 3254 142 19 0 chr10 11691863 11692378 -133896910 - L1PA16 LINE L1 0 6166 5642 8077 240 33 18 chr10 11692378 11694447 -133894841 + L1MCa LINE L1 2517 4639 -1787 1916 104 8 0 chr10 11694447 11694696 -133894592 + AluSg SINE Alu 46 296 -14 8077 240 33 18 chr10 11694696 11694980 -133894308 + L1MCa LINE L1 4639 4917 -1509 1727 173 22 0 chr10 11694989 11695266 -133894022 + AluJo SINE Alu 9 291 -21 189 94 0 0 chr10 11695267 11695299 -133893989 + (GGAA)n Simple_repeat Simple_repeat 4 35 0 679 287 83 63 chr10 11695388 11696166 -133893122 - L1MC5 LINE L1 -924 6884 6112 600 306 93 38 chr10 11696188 11696277 -133893011 - MER115 DNA AcHobo -9 684 601 2105 139 0 3 chr10 11696277 11696572 -133892716 - AluSx SINE Alu -18 294 1 600 306 93 38 chr10 11696572 11696946 -133892342 - MER115 DNA AcHobo -92 601 140 423 0 0 0 chr10 11697125 11697172 -133892116 + (CA)n Simple_repeat Simple_repeat 2 48 0 1085 184 14 0 chr10 11698891 11699098 -133890190 - Tigger1 DNA MER2_type 0 2418 2209 691 175 0 113 chr10 11699119 11699279 -133890009 - Tigger1 DNA MER2_type -2276 142 1 2194 105 9 6 chr10 11699289 11699620 -133889668 - THE1B LTR MaLR -30 427 1 337 265 32 91 chr10 11699752 11699971 -133889317 + MLT1L LTR MaLR 112 391 -194 1972 152 11 55 chr10 11699981 11700194 -133889094 - MLT1A1 LTR MaLR 0 365 175 2462 97 0 0 chr10 11700194 11700503 -133888785 - AluSx SINE Alu -3 309 1 1972 152 11 55 chr10 11700503 11700671 -133888617 - MLT1A1 LTR MaLR -190 175 1 2384 113 0 3 chr10 11701578 11701887 -133887401 - AluSx SINE Alu -4 308 1 419 177 0 0 chr10 11702398 11702477 -133886811 - LTR41 LTR ERVL -638 135 57 1383 210 66 17 chr10 11703341 11703689 -133885599 + MLT1A1 LTR MaLR 1 365 0 184 265 0 20 chr10 11705364 11705413 -133883875 - MIR SINE MIR -113 149 102 1782 186 0 17 chr10 11705424 11705719 -133883569 + AluJo SINE Alu 1 290 -22 962 185 6 12 chr10 11705731 11705893 -133883395 + AluJb SINE Alu 136 296 -16 2260 105 7 20 chr10 11706122 11706427 -133882861 - AluSg SINE Alu -9 301 1 1690 146 64 11 chr10 11706589 11706869 -133882419 + AluJo SINE Alu 1 295 -17 488 143 154 0 chr10 11707394 11707485 -133881803 + MLT1F LTR MaLR 438 542 0 618 221 70 47 chr10 11707492 11707705 -133881583 - LTR37B LTR ERV1 -53 415 198 461 276 76 0 chr10 11707820 11707965 -133881323 - MER20 DNA MER1_type -63 156 1 335 194 15 0 chr10 11707965 11708027 -133881261 - LTR37B LTR ERV1 -348 120 58 1418 162 164 55 chr10 11708028 11708411 -133880877 - MER61B LTR ERV1 0 425 1 292 286 0 0 chr10 11708427 11708504 -133880784 + MER34 LTR ERV1 3 79 -463 1728 202 139 92 chr10 11708765 11709489 -133879799 - LTR19C LTR ERV1 -15 764 7 373 293 49 24 chr10 11709554 11709677 -133879611 + MER34 LTR ERV1 388 513 -29 2198 120 3 0 chr10 11709720 11710021 -133879267 - AluSx SINE Alu -10 302 1 313 281 16 49 chr10 11711605 11711790 -133877498 + (TAGA)n Simple_repeat Simple_repeat 2 180 0 * 321 319 25 12 chr10 11711767 11711930 -133877358 + (TGGA)n Simple_repeat Simple_repeat 2 166 0 2896 103 11 3 chr10 11711930 11712540 -133876748 - PABL_A LTR ERV1 0 660 1 275 275 28 21 chr10 11712572 11712714 -133876574 + (TAGA)n Simple_repeat Simple_repeat 4 146 0 3361 152 30 22 chr10 11713533 11714163 -133875125 + MER41B LTR ERV1 1 635 0 1648 169 17 7 chr10 11714917 11715219 -133874069 - MER47A DNA MER2_type -3 363 59 3279 174 121 37 chr10 11715219 11715995 -133873293 + MER21B LTR ERV1 20 860 -3 581 296 66 8 chr10 11716037 11716294 -133872994 - MER5C DNA MER1_type -51 273 2 301 204 144 68 chr10 11716348 11716480 -133872808 - MER103 DNA DNA -8 158 17 256 257 40 3 chr10 11717783 11717876 -133871412 + MLT1H1 LTR MaLR 180 278 -289 274 247 28 62 chr10 11717924 11717970 -133871318 + C-rich Low_complexity Low_complexity 2 48 -125 218 81 27 0 chr10 11717970 11718007 -133871281 + (CCCCAG)n Simple_repeat Simple_repeat 2 39 0 274 247 28 62 chr10 11718007 11718138 -133871150 + C-rich Low_complexity Low_complexity 48 173 0 316 294 143 0 chr10 11718638 11718757 -133870531 + MIR SINE MIR 121 256 -6 1974 133 6 19 chr10 11718758 11719073 -133870215 - AluJo SINE Alu 0 312 2 816 292 104 14 chr10 11719105 11719985 -133869303 + L2 LINE L2 2328 3297 -16 506 66 0 13 chr10 11719985 11720061 -133869227 + (GGGA)n Simple_repeat Simple_repeat 3 77 0 347 283 26 0 chr10 11721807 11721920 -133867368 + MER5A DNA MER1_type 9 124 -65 222 288 27 14 chr10 11722613 11722686 -133866602 - L2 LINE L2 -541 2773 2700 2326 96 16 0 chr10 11722777 11723080 -133866208 - AluSx SINE Alu -4 308 1 1361 89 68 11 chr10 11724285 11724475 -133864813 - AluSc SINE Alu -9 300 100 460 253 74 32 chr10 11725531 11725721 -133863567 - L1MC4a LINE L1 -1910 5898 5701 841 110 0 0 chr10 11725722 11725831 -133863457 + AluSg/x SINE Alu 188 296 -16 1802 155 0 14 chr10 11726482 11726772 -133862516 + AluJo SINE Alu 1 286 -26 337 216 31 0 chr10 11726782 11726879 -133862409 - MER5B DNA MER1_type -78 100 1 1752 159 0 4 chr10 11726907 11727177 -133862111 - AluSx SINE Alu -43 269 1 195 235 147 0 chr10 11727973 11728041 -133861247 - MIR SINE MIR -65 197 120 312 163 38 38 chr10 11728043 11728123 -133861165 + L2 LINE L2 3193 3272 -41 274 282 51 8 chr10 11728239 11728356 -133860932 - MIR SINE MIR -57 151 30 3456 199 123 5 chr10 11728827 11730364 -133858924 + L1MB8 LINE L1 4369 6173 -5 767 269 67 0 chr10 11730378 11730601 -133858687 + MIR SINE MIR 24 261 -1 373 274 11 0 chr10 11731658 11731753 -133857535 - MER5B DNA MER1_type -56 122 27 2184 109 0 53 chr10 11731945 11732267 -133857021 + AluSx SINE Alu 1 305 -7 2299 79 0 0 chr10 11732807 11733084 -133856204 - AluSc SINE Alu -24 285 9 293 82 20 0 chr10 11733942 11733991 -133855297 + (TA)n Simple_repeat Simple_repeat 1 50 0 313 339 25 0 chr10 11737510 11737631 -133851657 - L2 LINE L2 -503 2811 2688 322 223 122 50 chr10 11737772 11737911 -133851377 - MIR SINE MIR -107 155 7 246 314 81 8 chr10 11737913 11738037 -133851251 - L2 LINE L2 -745 2569 2437 249 33 0 0 chr10 11738929 11738959 -133850329 + (CTG)n Simple_repeat Simple_repeat 1 30 0 245 273 250 8 chr10 11739554 11739686 -133849602 - L3 LINE CR1 -466 1111 948 317 292 174 14 chr10 11739740 11739959 -133849329 + MIR SINE MIR 9 262 0 1638 207 36 3 chr10 11739967 11740301 -133848987 - MER7A DNA MER2_type 0 346 4 324 339 122 11 chr10 11740331 11740520 -133848768 - L3 LINE CR1 -752 825 616 302 284 147 37 chr10 11740523 11740741 -133848547 + L1ME LINE L1 5254 5495 -2313 335 230 51 2 chr10 11740746 11740841 -133848447 + L1ME LINE L1 5614 5701 -420 389 351 98 21 chr10 11741276 11741612 -133847676 - L3 LINE CR1 -1080 497 136 2400 75 7 3 chr10 11744240 11744546 -133844742 + AluY SINE Alu 1 307 -4 5615 51 21 4 chr10 11744600 11745312 -133843976 + L1PA5 LINE L1 5430 6153 -1 262 207 189 9 chr10 11746966 11747077 -133842211 + MIR SINE MIR 24 154 -108 397 224 31 141 chr10 11748491 11748657 -133840631 + L1MC4 LINE L1 7016 7129 -913 2184 83 57 17 chr10 11748657 11748958 -133840330 + AluSp SINE Alu 1 313 0 397 224 31 141 chr10 11748958 11749124 -133840164 + L1MC4 LINE L1 7129 7312 -730 28 29 0 0 chr10 11749124 11749159 -133840129 + AT_rich Low_complexity Low_complexity 1 35 0 241 270 0 0 chr10 11749303 11749366 -133839922 + L1MC4 LINE L1 7498 7560 -482 244 155 24 107 chr10 11749712 11749796 -133839492 + L1MC5 LINE L1 7837 7913 -48 260 240 8 48 chr10 11749833 11749958 -133839330 + L1ME4a LINE L1 5963 6082 -39 2252 124 0 0 chr10 11750197 11750503 -133838785 - AluSx SINE Alu -6 306 1 438 323 152 28 chr10 11750521 11751265 -133838023 + L1M4 LINE L1 3154 3989 -2157 1752 154 0 4 chr10 11751973 11752239 -133837049 + AluJb SINE Alu 19 283 -29 2380 100 0 0 chr10 11752898 11753207 -133836081 - AluY SINE Alu -2 309 1 261 276 198 9 chr10 11753507 11753623 -133835665 + MIR SINE MIR 123 260 -2 24 67 0 0 chr10 11753763 11753808 -133835480 + AT_rich Low_complexity Low_complexity 1 45 0 258 341 19 23 chr10 11754570 11754730 -133834558 + MIR SINE MIR 1 146 -62 311 255 20 20 chr10 11755979 11756081 -133833207 - L1ME LINE L1 -326 5795 5694 1435 157 81 7 chr10 11756187 11756480 -133832808 - L1MA8 LINE L1 0 6291 5963 810 165 11 11 chr10 11756817 11756993 -133832295 + GA-rich Low_complexity Low_complexity 1 176 0 222 255 0 0 chr10 11756995 11757042 -133832246 + G-rich Low_complexity Low_complexity 1 47 0 206 287 11 23 chr10 11757161 11757248 -133832040 + GA-rich Low_complexity Low_complexity 4 89 0 1555 157 32 21 chr10 11762462 11762743 -133826545 + AluJo SINE Alu 1 284 -28 213 108 0 0 chr10 11764874 11764911 -133824377 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 21 100 0 0 chr10 11765219 11765289 -133823999 + AT_rich Low_complexity Low_complexity 1 70 0 5077 209 53 6 chr10 11765506 11766602 -133822686 + ERVL-C1 LTR ERVL 4611 5757 -7 1286 231 33 48 chr10 11766606 11767004 -133822284 + MLT2C1 LTR ERVL 6 397 0 4919 242 100 66 chr10 11767765 11768767 -133820521 - HAL1 LINE L1 -273 2234 1267 8730 53 7 1 chr10 11768767 11769768 -133819520 - LTR13 LTR ERVK 0 1007 1 4919 242 100 66 chr10 11769768 11770922 -133818366 - HAL1 LINE L1 -1240 1267 5 180 0 0 0 chr10 11771429 11771449 -133817839 + (T)n Simple_repeat Simple_repeat 1 20 0 2379 80 0 10 chr10 11771463 11771774 -133817514 + AluY SINE Alu 1 308 -3 467 86 0 0 chr10 11772211 11772281 -133817007 + AluSp/q SINE Alu 244 313 0 26 30 0 0 chr10 11772689 11772722 -133816566 + AT_rich Low_complexity Low_complexity 1 33 0 2367 88 3 3 chr10 11772795 11773101 -133816187 + AluSg SINE Alu 1 306 -4 526 257 50 50 chr10 11773275 11773454 -133815834 + MIR SINE MIR 37 215 -47 1274 228 103 19 chr10 11774282 11774708 -133814580 + MLT1C LTR MaLR 6 467 0 342 219 0 27 chr10 11774745 11774818 -133814470 - L2 LINE L2 -1 3271 3201 2590 89 8 28 chr10 11774838 11775196 -133814092 + L1PA11 LINE L1 5824 6174 0 22 0 0 0 chr10 11775428 11775450 -133813838 + AT_rich Low_complexity Low_complexity 1 22 0 226 236 0 18 chr10 11776611 11776666 -133812622 + CT-rich Low_complexity Low_complexity 6 59 0 2533 60 0 3 chr10 11776816 11777118 -133812170 + AluY SINE Alu 1 301 -10 181 282 0 0 chr10 11778444 11778483 -133810805 - MIR SINE MIR -15 247 209 296 321 0 22 chr10 11778568 11778705 -133810583 - MIR SINE MIR -47 215 82 276 315 128 34 chr10 11779471 11779620 -133809668 - L2 LINE L2 0 3272 3110 636 267 58 33 chr10 11780122 11780362 -133808926 - MIR SINE MIR -10 252 7 226 336 45 9 chr10 11780936 11781046 -133808242 + MIR3 SINE MIR 65 178 -30 1700 151 23 33 chr10 11781197 11781501 -133807787 + AluJo SINE Alu 1 301 -11 322 226 87 52 chr10 11782453 11782568 -133806720 - MER103 DNA DNA -46 120 2 916 204 159 9 chr10 11782581 11782807 -133806481 - MIR SINE MIR 0 262 3 610 237 50 0 chr10 11783061 11783200 -133806088 - MIR SINE MIR -5 257 112 2074 222 72 59 chr10 11783221 11783902 -133805386 + Charlie1a DNA MER1_type 59 748 -707 294 336 97 17 chr10 11784054 11784292 -133804996 + MLT1K LTR MaLR 326 582 -6 27 49 0 0 chr10 11784787 11784828 -133804460 + AT_rich Low_complexity Low_complexity 1 41 0 719 264 71 9 chr10 11785307 11785519 -133803769 + MIR SINE MIR 6 230 -32 704 152 45 23 chr10 11785639 11785771 -133803517 - FRAM SINE Alu 0 40 1 248 151 68 14 chr10 11785783 11785856 -133803432 - AluS SINE Alu -222 80 4 366 304 32 8 chr10 11786215 11786340 -133802948 + MER58B DNA MER1_type 212 339 -2 567 183 89 61 chr10 11786420 11786600 -133802688 + MER20 DNA MER1_type 1 185 -34 249 321 80 7 chr10 11786703 11786840 -133802448 - MIR3 SINE MIR -58 150 4 352 271 0 0 chr10 11789292 11789377 -133799911 + MIR SINE MIR 65 149 -113 191 277 169 24 chr10 11789355 11789438 -133799850 + L3b LINE CR1 1475 1569 -14 * 23 33 0 0 chr10 11789799 11789829 -133799459 + AT_rich Low_complexity Low_complexity 1 30 0 940 206 37 5 chr10 11790433 11790622 -133798666 + MER3 DNA MER1_type 1 195 -14 957 64 0 8 chr10 11790990 11791115 -133798173 - AluY SINE Alu -13 298 175 262 259 52 9 chr10 11792236 11792352 -133796936 + L1M4 LINE L1 5228 5348 -798 2220 116 12 91 chr10 11793055 11793462 -133795826 - THE1C LTR MaLR 0 375 1 204 97 0 0 chr10 11794383 11794414 -133794874 + (CTG)n Simple_repeat Simple_repeat 3 33 0 321 304 39 0 chr10 11795950 11796052 -133793236 - MIR SINE MIR -109 153 48 212 302 127 78 chr10 11796315 11796408 -133792880 - L2 LINE L2 -477 2837 2750 1901 112 30 3 chr10 11796408 11796704 -133792584 - AluSc SINE Alu -5 304 1 212 302 127 78 chr10 11796704 11796815 -133792473 - L2 LINE L2 -564 2750 2623 678 276 92 17 chr10 11796863 11797102 -133792186 - MIR SINE MIR -1 261 5 778 115 19 0 chr10 11797270 11797374 -133791914 - AluSg/x SINE Alu -15 295 190 231 111 0 111 chr10 11797925 11797988 -133791300 + L1ME4a LINE L1 5737 5792 -2016 21 0 0 0 chr10 11798117 11798138 -133791150 + AT_rich Low_complexity Low_complexity 1 21 0 228 221 189 0 chr10 11798149 11798244 -133791044 + L1ME4a LINE L1 6008 6120 -1 522 234 14 0 chr10 11798836 11798977 -133790311 + L1MC3 LINE L1 7643 7785 0 182 375 57 0 chr10 11799019 11799107 -133790181 + L2 LINE L2 3155 3247 -25 270 265 174 45 chr10 11800329 11800461 -133788827 + L2 LINE L2 3163 3311 -2 25 75 0 0 chr10 11800676 11800729 -133788559 + AT_rich Low_complexity Low_complexity 1 53 0 10845 39 3 0 chr10 11801355 11802664 -133786624 + L1P LINE L1 1598 2910 -3236 1582 170 74 51 chr10 11803042 11803378 -133785910 + MER2 DNA MER2_type 1 344 0 733 145 94 7 chr10 11804009 11804147 -133785141 - L1MC3 LINE L1 -1003 6782 6633 879 141 0 0 chr10 11804246 11804374 -133784914 + AluSg/x SINE Alu 172 299 -11 2421 104 0 0 chr10 11805451 11805759 -133783529 + AluSx SINE Alu 1 308 -4 244 284 134 8 chr10 11805790 11805924 -133783364 - L1M4 LINE L1 -1305 4841 4691 808 196 0 0 chr10 11805948 11806081 -133783207 - FLAM_A SINE Alu -3 139 7 312 291 65 22 chr10 11806088 11806261 -133783027 - L1MCa LINE L1 -978 1809 1382 191 301 14 91 chr10 11809255 11809398 -133779890 - MIR SINE MIR -46 216 85 426 203 85 102 chr10 11809589 11809766 -133779522 + MER5B DNA MER1_type 2 175 -3 210 327 125 40 chr10 11809895 11810143 -133779145 + L2 LINE L2 2490 2758 -556 4538 78 7 0 chr10 11810930 11811479 -133777809 + MER41A LTR ERV1 1 553 -1 468 99 0 0 chr10 11812145 11812216 -133777072 + (CA)n Simple_repeat Simple_repeat 2 72 0 418 163 75 0 chr10 11812219 11812299 -133776989 + MER53 DNA DNA 101 186 -3 2262 234 102 42 chr10 11812482 11813205 -133776083 + MER21B LTR ERV1 12 778 -85 327 330 10 0 chr10 11816309 11816406 -133772882 - L2 LINE L2 -498 2816 2719 6805 39 2 164 chr10 11817073 11818259 -133771029 + L1P LINE L1 3658 4652 -1494 22 70 0 0 chr10 11818847 11818890 -133770398 + AT_rich Low_complexity Low_complexity 1 43 0 693 166 47 72 chr10 11819540 11819733 -133769555 + MER53 DNA DNA 1 188 -1 183 255 64 0 chr10 11820911 11820958 -133768330 - MIR SINE MIR -50 212 163 22 35 0 0 chr10 11821643 11821672 -133767616 + AT_rich Low_complexity Low_complexity 1 29 0 577 276 99 64 chr10 11823029 11823341 -133765947 - L2 LINE L2 -62 3251 2929 507 106 0 0 chr10 11823341 11823407 -133765881 + Alu SINE Alu 2 67 -243 240 111 0 0 chr10 11824120 11824156 -133765132 + (CAT)n Simple_repeat Simple_repeat 1 36 0 409 260 47 16 chr10 11824594 11824721 -133764567 - MIR3 SINE MIR -30 178 48 260 310 155 7 chr10 11824861 11825016 -133764272 - MER5B DNA MER1_type 0 178 1 247 296 46 37 chr10 11826732 11826840 -133762448 + MIR SINE MIR 30 138 -124 549 320 101 24 chr10 11828208 11828623 -133760665 + L1ME LINE L1 5264 5710 -411 344 310 14 125 chr10 11828649 11828946 -133760342 - L2 LINE L2 -22 3250 2987 251 191 16 0 chr10 11829312 11829375 -133759913 + G-rich Low_complexity Low_complexity 5 68 0 432 301 182 47 chr10 11830059 11830608 -133758680 + L2 LINE L2 1742 2364 -950 2221 189 62 25 chr10 11830636 11831122 -133758166 + MLT1D LTR MaLR 1 504 -1 1002 211 59 157 chr10 11831945 11832737 -133756551 - L1MC5 LINE L1 -199 7762 7048 212 305 17 0 chr10 11833890 11833949 -133755339 + MIR SINE MIR 93 152 -110 1326 156 71 212 chr10 11833978 11834544 -133754744 + MLT1E2 LTR MaLR 16 622 -4 186 222 0 56 chr10 11834815 11834869 -133754419 - L2 LINE L2 -19 3253 3203 1104 150 18 53 chr10 11837982 11838209 -133751079 - MER20 DNA MER1_type 0 219 1 537 260 164 6 chr10 11839006 11839183 -133750105 + MIR SINE MIR 46 250 -12 368 264 75 0 chr10 11839225 11839331 -133749957 - L2 LINE L2 -16 3256 3143 611 217 6 26 chr10 11839513 11839861 -133749427 + (CACCAT)n Simple_repeat Simple_repeat 1 341 0 205 311 0 0 chr10 11839890 11839951 -133749337 - MIR SINE MIR -15 247 187 347 261 188 0 chr10 11839986 11840124 -133749164 + MER5A DNA MER1_type 26 189 0 1744 129 4 7 chr10 11842571 11842842 -133746446 + AluSx SINE Alu 40 309 -3 277 219 41 27 chr10 11842903 11842976 -133746312 - Charlie8 DNA MER1_type 0 2417 2344 370 264 68 61 chr10 11843044 11843207 -133746081 - Charlie8 DNA MER1_type -2198 219 56 939 185 28 6 chr10 11843298 11843476 -133745812 + MER5A DNA MER1_type 1 182 -7 1229 189 52 8 chr10 11843492 11843741 -133745547 + MER58B DNA MER1_type 79 338 -3 319 130 0 0 chr10 11845253 11845299 -133743989 - MER53 DNA DNA -5 184 139 442 220 64 0 chr10 11845365 11845474 -133743814 - MER53 DNA DNA -73 116 1 2240 107 0 19 chr10 11845919 11846237 -133743051 + AluSx SINE Alu 1 312 0 269 285 76 57 chr10 11848916 11849074 -133740214 + MIR SINE MIR 22 182 -80 302 311 20 33 chr10 11849773 11849924 -133739364 - L2 LINE L2 -856 2458 2310 393 284 146 41 chr10 11850505 11850943 -133738345 + L2 LINE L2 2782 3259 -54 22 0 0 0 chr10 11852688 11852710 -133736578 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr10 11852799 11852819 -133736469 + (TTAA)n Simple_repeat Simple_repeat 1 20 0 1846 125 7 0 chr10 11852821 11853121 -133736167 - AluSq SINE Alu 0 302 1 550 197 0 141 chr10 11853819 11853963 -133735325 + L1MC5 LINE L1 7753 7863 -98 216 0 0 0 chr10 11853963 11853987 -133735301 + (AATAG)n Simple_repeat Simple_repeat 2 25 0 550 197 0 141 chr10 11853987 11854040 -133735248 + L1MC5 LINE L1 7863 7922 -39 609 235 49 25 chr10 11854281 11854443 -133734845 - MER97b DNA MER1_type? -874 179 14 585 321 148 35 chr10 11854646 11855125 -133734163 - L3 LINE CR1 -323 1254 722 872 256 47 49 chr10 11855145 11855450 -133733838 + L1ME LINE L1 5474 5779 -342 1505 159 0 34 chr10 11855450 11855746 -133733542 + AluJo SINE Alu 20 305 -7 872 256 47 49 chr10 11855746 11855784 -133733504 + L1ME LINE L1 5779 5816 -305 253 333 19 0 chr10 11855808 11855916 -133733372 + L1ME LINE L1 141 250 -5955 454 258 70 65 chr10 11856324 11856553 -133732735 + L1ME LINE L1 786 1015 -5381 500 265 75 62 chr10 11856557 11856863 -133732425 + L1ME LINE L1 1027 1336 -4869 320 256 72 8 chr10 11857089 11857214 -133732074 + L1M1 LINE L1 2890 3022 -4543 313 276 26 0 chr10 11857523 11857599 -133731689 - L2 LINE L2 -2 3311 3234 347 313 40 0 chr10 11857603 11857733 -133731555 - MIR SINE MIR -63 145 5 2073 101 13 7 chr10 11857825 11858123 -133731165 - AluSx SINE Alu -12 300 1 1513 171 3 39 chr10 11858125 11858434 -133730854 - AluJo SINE Alu -9 303 6 2105 131 0 0 chr10 11858604 11858916 -133730372 - AluSx SINE Alu 0 312 1 681 275 244 28 chr10 11858971 11859155 -133730133 + L2 LINE L2 2044 2187 -1127 1596 189 7 0 chr10 11859155 11859451 -133729837 - AluJo SINE Alu -14 298 1 681 275 244 28 chr10 11859451 11859579 -133729709 + L2 LINE L2 2187 2286 -1028 1881 144 3 0 chr10 11859579 11859871 -133729417 + AluSx SINE Alu 1 293 -19 681 275 244 28 chr10 11859871 11860062 -133729226 + L2 LINE L2 2286 2657 -657 211 204 92 168 chr10 11860111 11860307 -133728981 + L2 LINE L2 2889 3069 -244 380 250 59 52 chr10 11860339 11860475 -133728813 + MER63 DNA MER1_type 1 763 -73 264 234 17 137 chr10 11860515 11860690 -133728598 + L2 LINE L2 3106 3259 -54 233 280 20 0 chr10 11860692 11860742 -133728546 + MER58A DNA MER1_type 1 51 -173 404 168 0 10 chr10 11860749 11860817 -133728471 - FLAM_A SINE Alu -11 122 66 343 140 0 18 chr10 11860974 11861031 -133728257 - FLAM_A SINE Alu -71 61 6 758 233 61 17 chr10 11861032 11861212 -133728076 + MER58A DNA MER1_type 37 224 0 281 167 0 0 chr10 11861221 11861269 -133728019 + L2 LINE L2 3263 3310 -3 237 162 0 0 chr10 11861322 11861359 -133727929 - MLT1A1 LTR MaLR 0 365 329 1004 151 6 45 chr10 11861359 11861538 -133727750 + FAM SINE Alu 1 172 -13 1455 205 33 45 chr10 11861538 11861875 -133727413 - MLT1A1 LTR MaLR -32 333 1 376 295 78 24 chr10 11862091 11862267 -133727021 - MIR SINE MIR -43 165 5 192 291 50 92 chr10 11862559 11862700 -133726588 - MIR3 SINE MIR -71 137 3 2219 117 0 9 chr10 11862727 11863043 -133726245 - AluSq SINE Alu 0 313 1 397 213 11 21 chr10 11863254 11863348 -133725940 - MER5B DNA MER1_type -85 93 1 214 211 0 58 chr10 11863348 11863383 -133725905 - MIR3 SINE MIR -51 157 126 451 281 140 0 chr10 11863693 11863857 -133725431 + MIR SINE MIR 2 188 -74 294 349 0 0 chr10 11863959 11864068 -133725220 - MIR SINE MIR -69 139 31 2229 106 0 6 chr10 11864165 11864477 -133724811 - AluSg SINE Alu 0 310 1 1065 23 78 0 chr10 11864996 11865124 -133724164 - MER85 DNA T2_type -1 138 1 245 265 15 0 chr10 11865291 11865359 -133723929 + MIR SINE MIR 76 144 -64 225 306 54 18 chr10 11865628 11865739 -133723549 - L2 LINE L2 -509 2805 2691 403 244 0 0 chr10 11866617 11866695 -133722593 + MER21B LTR ERV1 13 90 -773 911 183 125 5 chr10 11866717 11866925 -133722363 + MER21B LTR ERV1 19 251 -612 1398 196 11 0 chr10 11866954 11867219 -133722069 + AluJb SINE Alu 16 283 -29 1266 235 78 84 chr10 11867221 11867758 -133721530 + MER21B LTR ERV1 261 794 -69 256 359 114 5 chr10 11867925 11868109 -133721179 + L3 LINE CR1 1303 1506 -71 333 300 36 36 chr10 11868168 11868308 -133720980 + MIR3 SINE MIR 42 181 -27 1708 179 7 17 chr10 11868308 11868609 -133720679 - AluJb SINE Alu -14 298 1 1110 192 9 18 chr10 11869961 11870180 -133719108 - AluJo SINE Alu -95 217 1 1578 204 47 6 chr10 11870208 11870547 -133718741 - MLT1A1 LTR MaLR 0 365 13 2243 130 33 25 chr10 11871295 11871656 -133717632 - THE1B LTR MaLR 0 364 1 2097 117 7 0 chr10 11873085 11873383 -133715905 - AluSx SINE Alu -12 300 1 252 209 77 11 chr10 11874777 11874868 -133714420 + GA-rich Low_complexity Low_complexity 1 97 0 1512 105 5 5 chr10 11924935 11925144 -133664144 - AluSx SINE Alu -103 209 1 3809 148 32 22 chr10 11925144 11925724 -133663564 + Tigger1 DNA MER2_type 2 592 -1826 2105 125 24 3 chr10 11925724 11926013 -133663275 + AluSx SINE Alu 1 295 -17 3809 148 32 22 chr10 11926013 11926114 -133663174 + Tigger1 DNA MER2_type 592 690 -1728 317 225 84 0 chr10 11926103 11926174 -133663114 + Tigger1 DNA MER2_type 2121 2197 -221 * 245 218 139 10 chr10 11926405 11926506 -133662782 + HAL1b LINE L1 793 906 -442 2266 103 3 7 chr10 11927105 11927407 -133661881 - AluSp SINE Alu -12 301 1 1029 136 7 0 chr10 11927438 11927592 -133661696 - AluSg/x SINE Alu -16 294 140 1433 126 5 19 chr10 11927710 11927925 -133661363 - AluSx SINE Alu -100 212 1 1708 179 25 23 chr10 11928590 11928943 -133660345 + MLT1A1 LTR MaLR 11 364 -1 1926 123 68 3 chr10 11929703 11929996 -133659292 - AluJo SINE Alu 0 312 1 1598 184 22 7 chr10 11930622 11930899 -133658389 + AluJo SINE Alu 1 281 -31 2300 112 0 0 chr10 11930909 11931213 -133658075 + AluSx SINE Alu 1 304 -8 229 218 18 18 chr10 11932498 11932553 -133656735 - MLT1K LTR MaLR -1 587 533 1696 128 88 34 chr10 11932682 11932978 -133656310 - AluJb SINE Alu 0 312 1 1406 269 62 40 chr10 11933143 11933663 -133655625 + MER69 DNA AcHobo 1 531 -695 664 191 0 37 chr10 11933674 11933810 -133655478 + FLAM_C SINE Alu 6 136 -7 571 102 10 10 chr10 11933815 11933913 -133655375 + (GGAA)n Simple_repeat Simple_repeat 4 101 0 581 258 52 16 chr10 11933921 11934115 -133655173 + MER69 DNA AcHobo 601 801 -1725 2531 47 0 10 chr10 11935656 11935957 -133653331 + AluY SINE Alu 1 298 -13 420 35 0 0 chr10 11939045 11939102 -133650186 - AluY SINE Alu -10 300 244 858 92 0 0 chr10 11939102 11939211 -133650077 - AluY SINE Alu -138 173 65 2312 81 0 20 chr10 11939311 11939609 -133649679 - AluSc SINE Alu -17 292 1 1115 83 0 0 chr10 11939613 11939746 -133649542 - AluSq/x SINE Alu -180 133 1 843 262 116 35 chr10 11940268 11940672 -133648616 + MLT1J1 LTR MaLR 1 437 -9 227 299 114 30 chr10 11940781 11940982 -133648306 + L2 LINE L2 1728 1945 -1369 2340 100 0 0 chr10 11941388 11941688 -133647600 - AluSx SINE Alu -12 300 1 207 0 0 0 chr10 11941782 11941805 -133647483 + (T)n Simple_repeat Simple_repeat 1 23 0 2308 101 0 19 chr10 11942025 11942366 -133646922 - AluSg SINE Alu 0 310 1 298 250 43 17 chr10 11942416 11942532 -133646756 - Charlie2 DNA MER1_type -42 2820 2702 946 171 40 1 chr10 11942533 11942794 -133646494 - AluJo SINE Alu -10 302 2 258 172 0 31 chr10 11942921 11942985 -133646303 + CT-rich Low_complexity Low_complexity 1 62 0 1302 191 4 8 chr10 11943008 11943244 -133646044 - AluJo SINE Alu -77 235 1 3338 160 70 22 chr10 11943244 11943925 -133645363 + L1MCa LINE L1 482 1195 -5231 509 259 101 77 chr10 11944351 11944726 -133644562 + L1ME LINE L1 5389 5772 -349 2433 75 0 0 chr10 11944756 11945050 -133644238 + AluSc SINE Alu 1 294 -15 1063 208 48 111 chr10 11945286 11945630 -133643658 - MLT1A1 LTR MaLR 0 365 45 1758 142 53 11 chr10 11945630 11945912 -133643376 + AluJo SINE Alu 5 298 -14 1063 208 48 111 chr10 11945912 11945955 -133643333 - MLT1A1 LTR MaLR -320 45 1 180 0 0 0 chr10 11946616 11946636 -133642652 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 1595 188 7 7 chr10 11946937 11947225 -133642063 + AluJo SINE Alu 1 288 -24 2199 122 0 0 chr10 11947792 11948095 -133641193 - AluSx SINE Alu -9 303 1 377 286 18 0 chr10 11948099 11948211 -133641077 - L2 LINE L2 -239 3074 2961 410 143 13 0 chr10 11948350 11948427 -133640861 + CT-rich Low_complexity Low_complexity 1 78 0 184 231 77 0 chr10 11948619 11948671 -133640617 - L2 LINE L2 -30 3283 3228 2235 161 114 2 chr10 11949490 11949937 -133639351 + MER61D LTR ERV1 5 501 0 251 340 0 0 chr10 11949944 11950038 -133639250 - L2 LINE L2 -45 3227 3134 2221 117 3 0 chr10 11950054 11950354 -133638934 + AluSx SINE Alu 1 301 -11 439 167 115 0 chr10 11950356 11950452 -133638836 - MLT2B2 LTR ERVL -408 107 1 269 348 32 27 chr10 11950453 11950640 -133638648 - L2 LINE L2 -460 2854 2667 241 307 91 99 chr10 11950834 11950993 -133638295 - L2 LINE L2 -453 2861 2702 2731 122 26 5 chr10 11950993 11951412 -133637876 + MSTA LTR MaLR 1 428 0 241 307 91 99 chr10 11951412 11951910 -133637378 - L2 LINE L2 -612 2702 2209 1942 157 3 0 chr10 11952231 11952531 -133636757 - AluJo SINE Alu -11 301 1 2116 90 0 11 chr10 11952668 11952947 -133636341 + AluSx SINE Alu 35 310 -2 2144 114 14 0 chr10 11953573 11953862 -133635426 - AluSq SINE Alu -18 295 3 2155 81 46 0 chr10 11954203 11954486 -133634802 + AluSc SINE Alu 1 296 -13 2279 94 7 7 chr10 11954563 11954861 -133634427 + AluSg SINE Alu 1 298 -12 2270 96 20 7 chr10 11955760 11956063 -133633225 + AluSx SINE Alu 1 307 -5 377 262 64 21 chr10 11956096 11956283 -133633005 - L2 LINE L2 -1001 2313 2119 679 255 65 56 chr10 11956304 11956626 -133632662 + Charlie2 DNA MER1_type 1 325 -2457 1657 211 41 19 chr10 11956629 11957045 -133632243 + Charlie2 DNA MER1_type 1857 2281 -581 873 191 30 81 chr10 11957045 11957160 -133632128 + L1ME1 LINE L1 5939 6037 -129 2043 150 0 0 chr10 11957160 11957460 -133631828 - AluSx SINE Alu -11 301 2 873 191 30 81 chr10 11957460 11957580 -133631708 + L1ME1 LINE L1 6037 6162 -4 697 245 126 16 chr10 11957594 11957966 -133631322 + Charlie2 DNA MER1_type 2280 2692 -170 1491 96 5 0 chr10 11957966 11958164 -133631124 - AluSg/x SINE Alu -13 299 101 21 36 0 0 chr10 11958573 11958601 -133630687 + AT_rich Low_complexity Low_complexity 1 28 0 2374 92 0 0 chr10 11958706 11959001 -133630287 + AluSg SINE Alu 1 295 -15 460 237 124 12 chr10 11959065 11959234 -133630054 + L1ME3A LINE L1 5680 5867 -303 191 128 51 0 chr10 11960063 11960102 -133629186 + (CATA)n Simple_repeat Simple_repeat 2 42 0 22 56 0 0 chr10 11960395 11960431 -133628857 + AT_rich Low_complexity Low_complexity 1 36 0 368 257 73 0 chr10 11960455 11960564 -133628724 - L2 LINE L2 0 3313 3197 1181 145 67 0 chr10 11960663 11960856 -133628432 + MER46A DNA MER2_type 31 236 0 396 257 3 25 chr10 11962018 11962153 -133627135 + MIR SINE MIR 59 186 -61 355 278 126 17 chr10 11962523 11962753 -133626535 - MARNA DNA Mariner -198 388 134 531 151 315 0 chr10 11962839 11962985 -133626303 - MER44D DNA MER2_type -147 462 1 554 261 77 72 chr10 11963652 11964408 -133624880 + L1MEd LINE L1 860 1669 -4641 1991 143 10 0 chr10 11964807 11965107 -133624181 - AluSx SINE Alu -9 303 1 926 196 0 6 chr10 11965406 11965574 -133623714 + AluJb SINE Alu 131 297 -15 204 274 48 83 chr10 11966337 11966505 -133622783 + L2 LINE L2 2917 3078 -194 181 229 0 49 chr10 11966569 11966630 -133622658 + L2 LINE L2 3251 3308 -5 1958 139 0 7 chr10 11966924 11967240 -133622048 - AluSx SINE Alu 0 314 1 23 68 0 0 chr10 11969038 11969082 -133620206 + GC_rich Low_complexity Low_complexity 1 44 0 24 67 0 0 chr10 11969241 11969286 -133620002 + GC_rich Low_complexity Low_complexity 1 45 0 185 0 0 39 chr10 11969387 11969413 -133619875 + (CGCGG)n Simple_repeat Simple_repeat 4 28 0 235 187 13 27 chr10 11969564 11969639 -133619649 + (CCG)n Simple_repeat Simple_repeat 2 75 0 477 241 55 65 chr10 11969878 11970077 -133619211 + MIR SINE MIR 12 208 -54 2268 117 0 0 chr10 11970652 11970951 -133618337 + AluSg SINE Alu 5 303 -7 1743 187 96 8 chr10 11970970 11971333 -133617955 - L1MCa LINE L1 -5929 497 103 2196 94 0 57 chr10 11972823 11973154 -133616134 + AluSx SINE Alu 1 312 0 1214 50 17 17 chr10 11973701 11973881 -133615407 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 651 33 0 13 chr10 11973881 11974030 -133615258 + (TTCC)n Simple_repeat Simple_repeat 1 147 0 291 136 23 0 chr10 11974031 11974075 -133615213 - AluS SINE Alu -26 276 232 991 113 0 0 chr10 11974084 11974217 -133615071 - AluSq/x SINE Alu -178 134 2 1203 144 24 34 chr10 11974221 11974429 -133614859 - AluSg/x SINE Alu -9 303 98 1929 150 5 48 chr10 11975189 11975255 -133614033 - L1MB8 LINE L1 -5 6173 6106 2214 113 0 10 chr10 11975255 11975557 -133613731 + AluSx SINE Alu 6 304 -8 1929 150 5 48 chr10 11975557 11975869 -133613419 - L1MB8 LINE L1 -72 6106 5811 24 32 0 0 chr10 11976359 11976390 -133612898 + AT_rich Low_complexity Low_complexity 1 31 0 1729 171 20 3 chr10 11977634 11977939 -133611349 - AluJb SINE Alu -2 310 1 2358 107 0 0 chr10 11978009 11978309 -133610979 - AluSx SINE Alu -12 300 1 433 233 44 0 chr10 11978524 11978614 -133610674 + L1MC/D LINE L1 5512 5605 -2203 374 167 0 0 chr10 11978614 11978668 -133610620 - MLT1D LTR MaLR -100 405 352 2225 114 0 0 chr10 11978700 11978990 -133610298 - AluSq SINE Alu -23 290 1 331 308 0 11 chr10 11979084 11979175 -133610113 - MER45 DNA AcHobo -1491 90 1 1057 176 0 6 chr10 11979210 11979380 -133609908 + AluSx SINE Alu 1 169 -143 375 150 0 0 chr10 11979495 11979575 -133609713 + AluSc SINE Alu 196 275 -24 2382 97 3 0 chr10 11979634 11979933 -133609355 + AluSx SINE Alu 1 300 -12 1606 203 14 35 chr10 11979936 11980237 -133609051 + MER58B DNA MER1_type 4 310 -2110 1612 163 3 63 chr10 11980237 11980366 -133608922 + AluJo SINE Alu 1 136 -167 2149 107 0 27 chr10 11980366 11980666 -133608622 - AluSc SINE Alu -17 292 1 1701 104 0 5 chr10 11980667 11980889 -133608399 - AluSg/x SINE Alu -7 303 83 1612 163 3 63 chr10 11980889 11981078 -133608210 + AluJo SINE Alu 135 303 0 1606 203 14 35 chr10 11981078 11981120 -133608168 + MER58B DNA MER1_type 310 341 0 2223 101 0 17 chr10 11981375 11981707 -133607581 - AluSx SINE Alu 0 327 1 733 318 96 35 chr10 11982675 11983342 -133605946 + L2 LINE L2 2263 2970 -344 1940 152 0 16 chr10 11983820 11984135 -133605153 + AluJo SINE Alu 1 310 -2 722 141 8 0 chr10 11984421 11984549 -133604739 + CT-rich Low_complexity Low_complexity 1 129 0 204 40 0 0 chr10 11985463 11985488 -133603800 + (CA)n Simple_repeat Simple_repeat 2 26 0 627 64 0 0 chr10 11985955 11986033 -133603255 - L1PA10 LINE L1 -512 5656 5579 * 3291 102 11 0 chr10 11986032 11986485 -133602803 + L1PA10 LINE L1 5679 6136 -32 1295 182 57 109 chr10 11987975 11988200 -133601088 - L1MA10 LINE L1 0 6334 6099 1871 152 28 7 chr10 11988200 11988490 -133600798 + AluJo SINE Alu 1 296 -16 2370 105 0 0 chr10 11988495 11988800 -133600488 + AluSc SINE Alu 1 305 -4 1295 182 57 109 chr10 11988800 11989008 -133600280 - L1MA10 LINE L1 -239 6095 5918 336 161 0 0 chr10 11990350 11990412 -133598876 + CT-rich Low_complexity Low_complexity 3 64 0 1873 138 11 0 chr10 11990415 11990691 -133598597 - AluSx SINE Alu -33 279 1 378 0 0 0 chr10 11991341 11991383 -133597905 + (T)n Simple_repeat Simple_repeat 1 42 0 997 160 19 0 chr10 11991536 11991692 -133597596 - Tigger3(Golem) DNA MER2_type -2870 159 1 242 243 0 43 chr10 11991969 11992039 -133597249 + L2 LINE L2 3201 3267 -5 1860 125 0 4 chr10 11992111 11992375 -133596913 + AluSx SINE Alu 39 301 -11 2158 141 0 3 chr10 11993504 11993816 -133595472 - AluSx SINE Alu -1 311 1 353 317 27 33 chr10 11993915 11994098 -133595190 + L2 LINE L2 3131 3312 -1 245 208 14 0 chr10 11994098 11994170 -133595118 + GA-rich Low_complexity Low_complexity 4 76 0 836 257 116 56 chr10 11994732 11995214 -133594074 + MLT1G1 LTR MaLR 83 593 -2 432 97 0 0 chr10 11995613 11995675 -133593613 + (TA)n Simple_repeat Simple_repeat 2 63 0 727 262 129 21 chr10 11995718 11995997 -133593291 + MER46C DNA MER2_type 1 309 -29 739 296 35 16 chr10 11996051 11996308 -133592980 + MIR SINE MIR 1 262 0 1390 201 92 3 chr10 11996332 11996497 -133592791 - AluJo SINE Alu -2 310 161 286 85 34 0 chr10 11996497 11996556 -133592732 + T-rich Low_complexity Low_complexity 2 62 0 1390 201 92 3 chr10 11996556 11996673 -133592615 - AluJo SINE Alu -151 161 3 2134 128 3 3 chr10 11997045 11997343 -133591945 + AluSx SINE Alu 1 298 -14 231 232 89 71 chr10 11997384 11997496 -133591792 - MLT2E LTR ERVL -477 151 38 834 227 131 65 chr10 11997687 11998176 -133591112 + MER113 DNA MER1_type? 1 521 0 5026 160 28 6 chr10 11998321 11999446 -133589842 - L1MB5 LINE L1 -8 6166 5015 2119 113 0 0 chr10 11999711 12000044 -133589244 + AluSg SINE Alu 1 333 0 323 227 0 0 chr10 12000266 12000332 -133588956 + L1MB1 LINE L1 6100 6165 -3 668 282 85 16 chr10 12000393 12000675 -133588613 + L1ME4a LINE L1 5502 5808 -313 1922 151 3 17 chr10 12000675 12000974 -133588314 + AluJb SINE Alu 1 295 -17 668 282 85 16 chr10 12000974 12000996 -133588292 + L1ME4a LINE L1 5808 5827 -294 2161 128 0 10 chr10 12000996 12001294 -133587994 + AluSx SINE Alu 1 295 -17 195 384 63 28 chr10 12001464 12001719 -133587569 + L2 LINE L2 2473 2736 -578 260 355 35 44 chr10 12002072 12002275 -133587013 + L3 LINE CR1 184 384 -1193 1952 164 0 0 chr10 12002845 12003143 -133586145 + AluSx SINE Alu 1 298 -14 2008 161 3 0 chr10 12003223 12003515 -133585773 + AluSx SINE Alu 1 293 -19 339 85 0 0 chr10 12003519 12003566 -133585722 + (TA)n Simple_repeat Simple_repeat 2 48 0 1087 238 70 45 chr10 12003700 12004099 -133585189 + MLT1I LTR MaLR 1 409 0 310 297 40 37 chr10 12004259 12004438 -133584850 + MIR SINE MIR 17 193 -63 240 303 25 8 chr10 12005143 12005265 -133584023 + L2 LINE L2 3102 3225 -88 227 182 0 0 chr10 12005290 12005334 -133583954 + Alu SINE Alu 258 301 -1 2717 32 0 0 chr10 12005373 12005683 -133583605 - AluYa5 SINE Alu -1 310 1 234 232 18 0 chr10 12005717 12005773 -133583515 + MIR SINE MIR 205 261 -1 1896 148 10 0 chr10 12005775 12006065 -133583223 - AluSx SINE Alu -19 293 1 1703 219 152 20 chr10 12006083 12006577 -133582711 - L1MC4 LINE L1 -1 8041 7483 2338 84 3 0 chr10 12006905 12007238 -133582050 - AluSp SINE Alu 0 334 1 2229 112 3 10 chr10 12007238 12007542 -133581746 - AluSx SINE Alu -9 303 1 264 243 0 0 chr10 12007548 12007622 -133581666 + CT-rich Low_complexity Low_complexity 5 78 0 3191 178 122 6 chr10 12007878 12008553 -133580735 + L1MB7 LINE L1 5415 6167 -17 2305 104 0 7 chr10 12008915 12009224 -133580064 + AluSg SINE Alu 1 307 -3 521 198 0 0 chr10 12009596 12009697 -133579591 + L1M3 LINE L1 5605 5705 -466 757 115 0 0 chr10 12009697 12009834 -133579454 - AluSg/x SINE Alu 0 306 170 1101 159 18 36 chr10 12010253 12010473 -133578815 + AluJo SINE Alu 84 299 -13 4509 192 28 24 chr10 12010488 12010936 -133578352 - L1MB2 LINE L1 -2 6169 5724 2188 113 0 0 chr10 12010936 12011220 -133578068 + AluSx SINE Alu 1 284 -28 4509 192 28 24 chr10 12011220 12012370 -133576918 - L1MB2 LINE L1 -447 5724 4564 452 139 139 0 chr10 12012470 12012549 -133576739 - MLT1B LTR MaLR -300 90 1 5355 221 17 19 chr10 12012549 12013920 -133575368 - L1MB2 LINE L1 -2050 4096 2729 926 243 87 33 chr10 12014072 12014348 -133574940 - MLT1J2 LTR MaLR -147 303 13 466 242 167 11 chr10 12014352 12014538 -133574750 + HAL1 LINE L1 1581 1795 -712 1878 154 18 0 chr10 12014713 12014995 -133574293 - AluJb SINE Alu -28 284 1 2479 68 0 3 chr10 12015105 12015400 -133573888 - AluY SINE Alu -17 294 1 391 318 61 98 chr10 12015441 12016001 -133573287 - LTR67 LTR ERVL -3 554 16 355 200 0 11 chr10 12016376 12016466 -133572822 + HAL1 LINE L1 2270 2358 -149 289 237 186 0 chr10 12017039 12017157 -133572131 - L1M4 LINE L1 -1698 4448 4309 201 39 0 0 chr10 12017159 12017185 -133572103 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1884 98 18 18 chr10 12017193 12017468 -133571820 - AluSx SINE Alu -32 280 6 319 100 0 0 chr10 12017468 12017508 -133571780 - Alu SINE Alu -263 40 1 1604 160 13 33 chr10 12017642 12017942 -133571346 - AluJb SINE Alu -18 294 1 463 324 14 9 chr10 12017942 12018158 -133571130 - L1M4 LINE L1 -1929 4217 4001 835 137 0 43 chr10 12018163 12018302 -133570986 + FRAM SINE Alu 33 165 -11 21 0 0 0 chr10 12018302 12018323 -133570965 + AT_rich Low_complexity Low_complexity 1 21 0 258 190 50 58 chr10 12018377 12018498 -133570790 + Charlie2 DNA MER1_type 2671 2790 -72 573 168 15 102 chr10 12018580 12018717 -133570571 - MER63 DNA MER1_type -311 751 1 346 155 138 0 chr10 12018762 12018820 -133570468 - L2 LINE L2 -3 3310 3245 183 267 70 12 chr10 12018961 12019047 -133570241 + L2 LINE L2 2697 2787 -527 195 293 173 40 chr10 12019187 12019337 -133569951 + L2 LINE L2 2932 3101 -171 532 208 96 0 chr10 12019455 12019580 -133569708 - MER58B DNA MER1_type -5 336 200 735 194 82 0 chr10 12019643 12019813 -133569475 + MER20 DNA MER1_type 36 219 0 368 276 56 47 chr10 12019985 12020240 -133569048 + L1ME4a LINE L1 5573 5833 -288 652 235 60 6 chr10 12020240 12020406 -133568882 - MER5B DNA MER1_type -1 177 3 368 276 56 47 chr10 12020406 12020472 -133568816 + L1ME4a LINE L1 5833 5897 -224 508 101 22 0 chr10 12020490 12020579 -133568709 + (TGGA)n Simple_repeat Simple_repeat 1 91 0 295 198 83 33 chr10 12020788 12020909 -133568379 - L1ME4a LINE L1 0 6121 5995 1870 127 3 35 chr10 12021438 12021614 -133567674 - AluSx SINE Alu -7 305 125 204 40 0 0 chr10 12021614 12021639 -133567649 + (TGG)n Simple_repeat Simple_repeat 1 25 0 2106 95 0 3 chr10 12021641 12021936 -133567352 - AluSq SINE Alu -19 294 1 1870 127 3 35 chr10 12021936 12022071 -133567217 - AluSx SINE Alu -188 124 1 22 56 0 0 chr10 12022684 12022720 -133566568 + AT_rich Low_complexity Low_complexity 1 36 0 2291 65 3 13 chr10 12022855 12023161 -133566127 - AluY SINE Alu -8 303 1 1947 138 0 3 chr10 12023416 12023720 -133565568 + AluSx SINE Alu 1 303 -9 845 179 26 19 chr10 12023732 12023888 -133565400 + AluJb SINE Alu 130 286 -26 1826 148 0 10 chr10 12024324 12024635 -133564653 + AluJb SINE Alu 1 308 -4 3253 151 93 63 chr10 12024826 12025112 -133564176 + L1MB2 LINE L1 5434 5710 -461 1628 94 0 4 chr10 12025112 12025346 -133563942 + AluY SINE Alu 62 294 -17 3253 151 93 63 chr10 12025346 12025769 -133563519 + L1MB2 LINE L1 5710 6164 -7 459 318 125 64 chr10 12026523 12026866 -133562422 + L2 LINE L2 2897 3260 -12 21 0 0 0 chr10 12027314 12027335 -133561953 + AT_rich Low_complexity Low_complexity 1 21 0 1187 231 73 43 chr10 12027774 12028142 -133561146 + L1MC4 LINE L1 7522 7900 -142 27 62 0 0 chr10 12028148 12028196 -133561092 + AT_rich Low_complexity Low_complexity 1 48 0 229 341 37 73 chr10 12030675 12030839 -133558449 - MIR3 SINE MIR -14 194 37 372 224 9 35 chr10 12031324 12031440 -133557848 + L1MC4 LINE L1 7929 8041 -1 24 77 0 0 chr10 12031470 12031522 -133557766 + AT_rich Low_complexity Low_complexity 1 52 0 2050 106 7 7 chr10 12031549 12031842 -133557446 - AluSx SINE Alu -19 293 1 287 204 224 0 chr10 12032042 12032140 -133557148 - MER20B DNA MER1_type -663 120 1 215 373 130 6 chr10 12034078 12034239 -133555049 + L2 LINE L2 2685 2865 -449 249 250 128 93 chr10 12034468 12034640 -133554648 - L2 LINE L2 -16 3297 3120 1363 136 0 5 chr10 12035231 12035445 -133553843 - AluJb SINE Alu -99 213 1 193 378 40 0 chr10 12035578 12035652 -133553636 + L2 LINE L2 3237 3313 0 1857 168 62 54 chr10 12035734 12036157 -133553131 + MSTB LTR MaLR 1 426 0 1719 136 4 0 chr10 12038301 12038558 -133550730 + AluSx SINE Alu 35 292 -20 620 112 19 47 chr10 12039039 12039146 -133550142 + FLAM_C SINE Alu 8 111 -32 243 0 0 0 chr10 12039388 12039415 -133549873 + (TTG)n Simple_repeat Simple_repeat 1 27 0 256 204 19 0 chr10 12039867 12039921 -133549367 - L2 LINE L2 -1 3271 3217 1725 160 7 0 chr10 12040728 12041010 -133548278 - L1MB3 LINE L1 -329 5854 5571 3841 155 5 65 chr10 12041404 12041584 -133547704 - L1MB3 LINE L1 -1 6182 5993 2199 79 7 0 chr10 12041584 12041874 -133547414 + AluSq SINE Alu 1 292 -21 3841 155 5 65 chr10 12041874 12042355 -133546933 - L1MB3 LINE L1 -190 5993 5572 2545 42 3 3 chr10 12042355 12042666 -133546622 - AluY SINE Alu 0 311 1 3841 155 5 65 chr10 12042666 12042782 -133546506 - L1MB3 LINE L1 -611 5572 5451 2104 136 0 0 chr10 12042927 12043235 -133546053 - AluSx SINE Alu -4 308 1 201 276 0 40 chr10 12044079 12044155 -133545133 + MIR SINE MIR 82 154 -108 773 163 0 8 chr10 12044586 12044709 -133544579 + FLAM_A SINE Alu 6 127 -15 378 0 0 0 chr10 12045300 12045342 -133543946 + (TG)n Simple_repeat Simple_repeat 1 42 0 213 65 0 0 chr10 12045342 12045373 -133543915 + (GA)n Simple_repeat Simple_repeat 2 32 0 1635 140 19 0 chr10 12045373 12045630 -133543658 - AluJo SINE Alu -30 282 21 1812 187 88 78 chr10 12045879 12046392 -133542896 + MLT2B1 LTR ERVL 3 520 0 2112 108 7 0 chr10 12046718 12047023 -133542265 - AluSx SINE Alu -5 307 1 949 239 137 35 chr10 12047024 12047396 -133541892 - MLT1C LTR MaLR -52 415 6 1935 148 32 86 chr10 12047404 12047628 -133541660 - MLT1B LTR MaLR -6 384 190 1779 173 0 10 chr10 12047628 12047940 -133541348 - AluJo SINE Alu -2 310 2 1935 148 32 86 chr10 12047940 12048121 -133541167 - MLT1B LTR MaLR -200 190 1 250 163 61 0 chr10 12048254 12048303 -133540985 - MIR SINE MIR -16 246 195 508 254 6 21 chr10 12048635 12048797 -133540491 - MLT1K LTR MaLR -2 613 431 2439 60 0 0 chr10 12048797 12049095 -133540193 - AluY SINE Alu -13 298 1 480 120 8 103 chr10 12049219 12049271 -133540017 - L1MA2 LINE L1 0 6304 6249 183 100 0 0 chr10 12049271 12049301 -133539987 + (TTTG)n Simple_repeat Simple_repeat 1 30 0 1840 106 7 14 chr10 12049301 12049584 -133539704 - AluSx SINE Alu -31 281 1 480 120 8 103 chr10 12049584 12049647 -133539641 - L1MA2 LINE L1 -53 6251 6199 595 229 137 78 chr10 12049657 12049963 -133539325 - MLT1K LTR MaLR -162 426 103 1059 203 56 141 chr10 12050176 12050708 -133538580 + MLT1D LTR MaLR 17 503 -2 1859 234 139 63 chr10 12051038 12051201 -133538087 + L2 LINE L2 1818 1967 -1346 1850 141 20 0 chr10 12051201 12051498 -133537790 - AluSx SINE Alu -9 303 1 1859 234 139 63 chr10 12051498 12052071 -133537217 + L2 LINE L2 1967 2495 -818 1663 143 55 10 chr10 12052071 12052364 -133536924 - AluSx SINE Alu -6 306 1 1859 234 139 63 chr10 12052364 12052381 -133536907 + L2 LINE L2 2495 2509 -804 1659 160 29 13 chr10 12052381 12052694 -133536594 - L1MB4 LINE L1 0 6180 5863 1859 234 139 63 chr10 12052694 12053318 -133535970 + L2 LINE L2 2509 3309 -4 782 189 52 0 chr10 12053377 12053530 -133535758 - AluJo SINE Alu -149 163 3 842 196 12 0 chr10 12053562 12053725 -133535563 + AluJb SINE Alu 137 301 -11 258 304 11 43 chr10 12053750 12053842 -133535446 + MER5B DNA MER1_type 87 175 -3 429 298 76 18 chr10 12054214 12054385 -133534903 - MIR SINE MIR -73 189 9 2039 119 3 6 chr10 12054567 12054878 -133534410 + AluSx SINE Alu 3 312 0 1274 176 0 52 chr10 12054881 12055131 -133534157 + MLT1B LTR MaLR 1 237 -153 463 289 24 10 chr10 12055362 12055549 -133533739 + L1MA4A LINE L1 5686 5877 -295 2019 108 7 3 chr10 12055549 12055837 -133533451 + AluSx SINE Alu 1 289 -23 463 289 24 10 chr10 12055837 12055866 -133533422 + L1MA4A LINE L1 5877 5904 -268 1096 153 0 0 chr10 12055890 12056053 -133533235 - AluJb SINE Alu -15 297 135 625 311 48 9 chr10 12056258 12056486 -133532802 - MIR SINE MIR -24 238 2 1965 102 0 20 chr10 12056842 12057135 -133532153 - AluSx SINE Alu -17 295 9 385 349 40 21 chr10 12057146 12057379 -133531909 - MIR SINE MIR -25 237 1 353 173 25 25 chr10 12057624 12057705 -133531583 + MER5B DNA MER1_type 25 105 -73 1928 142 0 19 chr10 12057723 12058034 -133531254 - AluSx SINE Alu -7 305 1 1639 157 7 7 chr10 12058042 12058329 -133530959 - AluJb SINE Alu -25 287 1 2007 119 0 3 chr10 12058388 12058682 -133530606 - AluSg1 SINE Alu -16 293 1 2019 151 7 62 chr10 12058703 12059107 -133530181 + MLT1B LTR MaLR 1 382 -8 251 344 0 0 chr10 12059378 12059468 -133529820 + GA-rich Low_complexity Low_complexity 2 91 0 301 291 52 37 chr10 12060159 12060293 -133528995 - MIR3 SINE MIR -4 204 69 444 328 47 81 chr10 12060417 12060798 -133528490 + L2 LINE L2 2902 3269 -3 655 196 159 0 chr10 12060848 12060986 -133528302 + FRAM SINE Alu 9 168 -8 2666 78 33 19 chr10 12061055 12061258 -133528030 - THE1B LTR MaLR 0 364 152 2210 103 0 3 chr10 12061258 12061558 -133527730 + AluSc SINE Alu 2 300 -9 2666 78 33 19 chr10 12061558 12061713 -133527575 - THE1B LTR MaLR -212 152 1 804 131 0 36 chr10 12062171 12062308 -133526980 - FRAM SINE Alu -5 171 40 2031 120 13 0 chr10 12063357 12063534 -133525754 - AluSx SINE Alu -7 305 121 230 0 33 0 chr10 12063534 12063564 -133525724 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 2031 120 13 0 chr10 12063564 12063687 -133525601 - AluSx SINE Alu -191 121 1 520 195 49 41 chr10 12063688 12063811 -133525477 - L2 LINE L2 -3 3310 3187 790 135 0 0 chr10 12064492 12064603 -133524685 - FLAM_C SINE Alu -31 112 2 703 244 80 19 chr10 12064611 12064824 -133524464 - MLT1C LTR MaLR 0 467 242 2184 89 3 7 chr10 12064898 12065200 -133524088 - AluSp SINE Alu -6 307 7 1913 141 3 7 chr10 12065314 12065612 -133523676 - AluJb SINE Alu -15 297 1 407 262 10 0 chr10 12065674 12065777 -133523511 + L1ME LINE L1 5606 5709 -412 27 49 0 0 chr10 12065914 12065955 -133523333 + AT_rich Low_complexity Low_complexity 1 41 0 192 40 0 0 chr10 12066185 12066210 -133523078 + (CA)n Simple_repeat Simple_repeat 2 26 0 1781 167 0 17 chr10 12066660 12066954 -133522334 + AluJo SINE Alu 24 312 0 2452 77 3 6 chr10 12067054 12067366 -133521922 - AluY SINE Alu 0 311 1 23 0 0 0 chr10 12067526 12067549 -133521739 + GC_rich Low_complexity Low_complexity 1 23 0 593 279 101 68 chr10 12068530 12068686 -133520602 - L2 LINE L2 -6 3307 3158 2419 77 0 3 chr10 12068686 12068986 -133520302 + AluSq SINE Alu 1 299 -14 593 279 101 68 chr10 12068986 12069227 -133520061 - L2 LINE L2 -155 3158 2897 1596 161 58 33 chr10 12069236 12069500 -133519788 + L1MA9 LINE L1 5976 6251 -61 2027 160 0 3 chr10 12069500 12069806 -133519482 + AluJo SINE Alu 1 305 -7 1596 161 58 33 chr10 12069806 12069870 -133519418 + L1MA9 LINE L1 6251 6312 0 293 291 168 16 chr10 12069875 12070184 -133519104 - L2 LINE L2 -411 2903 2548 2579 130 59 17 chr10 12070894 12071303 -133517985 - MSTB LTR MaLR 0 426 1 1435 239 30 16 chr10 12071475 12071844 -133517444 + MER87 LTR ERV1 168 541 0 637 226 155 11 chr10 12071844 12072025 -133517263 - MIR SINE MIR -4 258 52 7174 168 149 52 chr10 12072093 12073692 -133515596 + MER52A LTR ERV1 1 1755 0 811 239 56 17 chr10 12073698 12073932 -133515356 + L2 LINE L2 2432 2674 -640 41772 31 21 1 chr10 12073933 12079962 -133509326 - L1PA2 LINE L1 -1 6154 4 654 90 0 0 chr10 12079982 12080071 -133509217 - THE1B-int LTR MaLR -1183 397 309 518 136 12 0 chr10 12080075 12080156 -133509132 - THE1B LTR MaLR -83 281 200 1064 279 72 16 chr10 12080157 12080707 -133508581 + L2 LINE L2 2661 3311 -2 290 279 95 34 chr10 12080683 12080829 -133508459 - MIR SINE MIR -60 148 18 * 1694 161 3 27 chr10 12081039 12081331 -133507957 - AluJo SINE Alu -21 291 7 2172 149 33 30 chr10 12081426 12081789 -133507499 - THE1B LTR MaLR 0 364 1 2337 105 0 0 chr10 12082169 12082464 -133506824 - AluSx SINE Alu -17 295 1 34 0 0 0 chr10 12082923 12082957 -133506331 + AT_rich Low_complexity Low_complexity 1 34 0 2387 79 0 3 chr10 12083814 12084106 -133505182 - AluSx SINE Alu -21 291 1 484 152 7 7 chr10 12084765 12084903 -133504385 + (CGGGG)n Simple_repeat Simple_repeat 4 141 0 23 0 0 0 chr10 12085198 12085221 -133504067 + GC_rich Low_complexity Low_complexity 1 23 0 513 229 125 85 chr10 12085793 12086169 -133503119 - MER115 DNA AcHobo -27 666 276 354 253 112 54 chr10 12086622 12086831 -133502457 - MIR SINE MIR -35 227 8 183 306 357 11 chr10 12087158 12087615 -133501673 - L2 LINE L2 -722 2592 1978 2402 105 0 0 chr10 12088571 12088876 -133500412 + AluSq SINE Alu 6 310 -3 1723 73 21 59 chr10 12088876 12089162 -133500126 + L1MA2 LINE L1 6029 6303 -1 1836 110 4 0 chr10 12089174 12089410 -133499878 + AluSq SINE Alu 1 237 -76 1655 142 8 0 chr10 12090746 12090986 -133498302 - AluJo SINE Alu -10 302 61 252 66 0 131 chr10 12090990 12091051 -133498237 - AluJo SINE Alu -151 151 99 2175 138 0 0 chr10 12091124 12091429 -133497859 + AluSx SINE Alu 1 305 -7 223 250 117 0 chr10 12091515 12091575 -133497713 + MIR3 SINE MIR 126 192 -16 2592 83 0 0 chr10 12092304 12092616 -133496672 - AluSx SINE Alu 0 312 1 199 266 125 31 chr10 12093123 12093187 -133496101 - L2 LINE L2 -2 3270 3201 217 222 0 0 chr10 12093292 12093337 -133495951 + (TTCA)n Simple_repeat Simple_repeat 4 48 0 2241 109 0 26 chr10 12094636 12094940 -133494348 - AluSx SINE Alu -16 296 1 346 262 115 16 chr10 12094951 12095142 -133494146 - L1ME4a LINE L1 -9 6112 5903 864 246 75 0 chr10 12095165 12095364 -133493924 - MIR SINE MIR -17 245 32 302 232 116 39 chr10 12095464 12095619 -133493669 - L1ME4a LINE L1 -355 5766 5600 2159 120 7 7 chr10 12095619 12095911 -133493377 + AluSx SINE Alu 1 292 -20 1822 134 0 22 chr10 12096283 12096552 -133492736 - AluSx SINE Alu 0 312 50 2150 121 7 16 chr10 12097559 12097864 -133491424 + AluSx SINE Alu 1 302 -10 2107 102 49 0 chr10 12099271 12099555 -133489733 - AluSx SINE Alu -14 298 1 1814 178 13 45 chr10 12101437 12101591 -133487697 + MLT1A1 LTR MaLR 1 158 -207 2414 99 0 3 chr10 12101591 12101904 -133487384 + AluSq SINE Alu 1 312 -1 1814 178 13 45 chr10 12101904 12102126 -133487162 + MLT1A1 LTR MaLR 158 365 0 477 280 140 26 chr10 12102337 12102530 -133486758 - MIR SINE MIR -12 250 36 199 227 23 0 chr10 12103527 12103571 -133485717 - MIR3 SINE MIR -48 160 116 230 228 8 126 chr10 12103641 12103727 -133485561 + L2 LINE L2 2141 2209 -1105 933 203 47 33 chr10 12103727 12103939 -133485349 + MER20 DNA MER1_type 3 217 -2 230 228 8 126 chr10 12103939 12103979 -133485309 + L2 LINE L2 2209 2252 -1062 575 208 69 27 chr10 12104035 12104340 -133484948 - MLT1G3 LTR MaLR -82 513 154 903 304 59 33 chr10 12104375 12104471 -133484817 - L2 LINE L2 -1 3312 3220 867 173 0 0 chr10 12104471 12104604 -133484684 + FLAM_C SINE Alu 1 133 0 903 304 59 33 chr10 12104604 12104964 -133484324 - L2 LINE L2 -93 3220 2844 2197 95 14 7 chr10 12106831 12107127 -133482161 + AluSx SINE Alu 1 298 -14 297 340 118 13 chr10 12107614 12107767 -133481521 - MIR SINE MIR -37 225 57 2107 151 3 0 chr10 12108869 12109174 -133480114 - AluJo SINE Alu -2 310 5 387 200 0 0 chr10 12109178 12109253 -133480035 - L1M4 LINE L1 -1502 4644 4570 629 276 63 57 chr10 12109307 12109815 -133479473 - L1MC4 LINE L1 -29 8013 7503 1184 148 40 20 chr10 12109985 12110187 -133479101 + AluJo SINE Alu 85 290 -22 1871 216 100 42 chr10 12110201 12110260 -133479028 - MLT1E LTR MaLR -4 589 535 2427 88 0 0 chr10 12110260 12110567 -133478721 - AluY SINE Alu -4 307 1 1871 216 100 42 chr10 12110567 12111057 -133478231 - MLT1E LTR MaLR -58 535 8 343 293 39 14 chr10 12111081 12111298 -133477990 + MLT1L LTR MaLR 359 605 -10 2335 93 0 7 chr10 12111480 12111780 -133477508 + AluSx SINE Alu 1 298 -14 1539 130 0 9 chr10 12112090 12112313 -133476975 + AluSg/x SINE Alu 65 285 -27 312 255 11 64 chr10 12112313 12112407 -133476881 - L1MC4 LINE L1 -1340 6702 6614 2956 196 19 21 chr10 12112827 12112951 -133476337 - L1MB8 LINE L1 -5 6173 6050 2362 112 0 0 chr10 12112951 12113256 -133476032 + AluSx SINE Alu 1 305 -7 2956 196 19 21 chr10 12113256 12113749 -133475539 - L1MB8 LINE L1 -128 6050 5557 2636 64 0 0 chr10 12113840 12114151 -133475137 - AluY SINE Alu 0 311 1 458 188 18 27 chr10 12114501 12114613 -133474675 - MER113 DNA MER1_type? -410 111 1 1073 152 53 6 chr10 12114648 12114819 -133474469 - AluSx SINE Alu -133 179 1 266 211 0 35 chr10 12115068 12115125 -133474163 - L2 LINE L2 -14 3299 3245 224 284 187 15 chr10 12115244 12115378 -133473910 + MIR SINE MIR 36 192 -70 312 273 153 6 chr10 12115671 12115847 -133473441 + LTR16C LTR ERVL 286 487 -4 1731 165 26 0 chr10 12116972 12117244 -133472044 - AluJb SINE Alu -12 300 22 2478 94 3 0 chr10 12117253 12117561 -133471727 - AluSp SINE Alu -4 309 1 2274 123 0 0 chr10 12117642 12117934 -133471354 - AluSx SINE Alu -20 292 1 501 228 48 42 chr10 12117958 12118147 -133471141 - L1MC5 LINE L1 -36 7925 7736 1176 257 76 5 chr10 12118665 12119035 -133470253 + MER20B DNA MER1_type 32 427 -356 1907 135 19 62 chr10 12119057 12119382 -133469906 - AluJb SINE Alu -1 311 1 364 203 60 53 chr10 12119499 12119632 -133469656 + MER20B DNA MER1_type 475 608 -175 360 269 111 0 chr10 12119682 12119790 -133469498 + HAL1 LINE L1 835 954 -1553 1781 148 81 0 chr10 12119791 12120062 -133469226 - AluJo SINE Alu -19 293 1 1284 60 0 0 chr10 12120079 12120228 -133469060 + AluSc SINE Alu 152 300 -9 226 217 43 22 chr10 12120313 12120405 -133468883 + (TA)n Simple_repeat Simple_repeat 1 94 0 634 256 154 11 chr10 12120431 12120670 -133468618 + HAL1 LINE L1 1096 1384 -1123 2361 98 7 0 chr10 12120670 12120975 -133468313 + AluSq SINE Alu 1 307 -6 634 256 154 11 chr10 12120975 12121020 -133468268 + HAL1 LINE L1 1384 1421 -1086 465 232 167 18 chr10 12121414 12121582 -133467706 + LTR16C LTR ERVL 299 491 0 2518 104 25 6 chr10 12121585 12121940 -133467348 - THE1B LTR MaLR -2 362 1 841 93 0 0 chr10 12122459 12122567 -133466721 + AluSg/x SINE Alu 192 299 -13 1082 199 0 15 chr10 12122577 12122783 -133466505 + AluJo SINE Alu 86 288 -24 2099 128 0 0 chr10 12122819 12123100 -133466188 + AluSx SINE Alu 20 300 -12 793 156 0 22 chr10 12123195 12123330 -133465958 + FLAM_C SINE Alu 2 133 -10 1783 198 73 22 chr10 12123335 12123744 -133465544 - MLT2B1 LTR ERVL -90 430 1 2057 115 0 4 chr10 12124107 12124386 -133464902 - AluSx SINE Alu -34 278 1 1511 151 55 19 chr10 12124468 12124762 -133464526 - AluJo SINE Alu 0 313 10 2400 76 0 0 chr10 12124783 12125072 -133464216 - AluSx SINE Alu -19 293 5 622 218 140 10 chr10 12125684 12125877 -133463411 - MER20B DNA MER1_type -1 218 1 349 209 19 57 chr10 12126540 12126645 -133462643 - ORSL DNA AcHobo -2 273 173 25 51 0 0 chr10 12126926 12126965 -133462323 + AT_rich Low_complexity Low_complexity 1 39 0 1669 198 63 11 chr10 12127161 12127525 -133461763 - MLT1B LTR MaLR -4 386 4 2236 113 0 3 chr10 12127880 12128182 -133461106 - AluSx SINE Alu -11 301 1 213 308 119 21 chr10 12128436 12128579 -133460709 + L2 LINE L2 2949 3105 -208 2252 105 0 40 chr10 12128585 12128908 -133460380 - AluSx SINE Alu -2 310 1 2452 92 0 0 chr10 12129193 12129496 -133459792 + AluSg SINE Alu 1 303 -7 429 150 25 0 chr10 12129662 12129742 -133459546 + AluS SINE Alu 230 311 -1 308 329 76 32 chr10 12129743 12129901 -133459387 - L2 LINE L2 -2813 501 337 1098 252 77 9 chr10 12129926 12130275 -133459013 - MER93b LTR ERV1 0 373 1 201 158 0 0 chr10 12130383 12130421 -133458867 + (CAGAGA)n Simple_repeat Simple_repeat 2 39 0 1676 204 6 28 chr10 12130923 12131241 -133458047 - AluJb SINE Alu -1 311 1 243 258 189 45 chr10 12131503 12131635 -133457653 + MER5A DNA MER1_type 1 151 -38 192 200 0 0 chr10 12131680 12131720 -133457568 + (CATATA)n Simple_repeat Simple_repeat 2 41 0 21 0 0 0 chr10 12132703 12132724 -133456564 + AT_rich Low_complexity Low_complexity 1 21 0 710 126 4 6 chr10 12132740 12132979 -133456309 + AluJo SINE Alu 10 296 -16 319 206 34 137 chr10 12133000 12133088 -133456200 - MIR3 SINE MIR -65 143 74 1678 234 91 34 chr10 12133088 12133191 -133456097 - MLT1D LTR MaLR -3 502 406 1729 180 42 0 chr10 12133191 12133474 -133455814 + AluJb SINE Alu 1 295 -17 1678 234 91 34 chr10 12133474 12133844 -133455444 - MLT1D LTR MaLR -99 406 2 319 206 34 137 chr10 12133844 12133901 -133455387 - MIR3 SINE MIR -134 74 13 599 156 200 15 chr10 12134255 12134390 -133454898 - MER4C LTR ERV1 0 465 306 1973 113 40 0 chr10 12134390 12134665 -133454623 + AluSx SINE Alu 1 286 -26 1894 117 22 104 chr10 12134727 12135063 -133454225 - MER4A LTR ERV1 -239 425 63 8409 54 4 4 chr10 12135063 12136070 -133453218 + LTR13 LTR ERVK 1 1007 0 591 15 0 0 chr10 12136080 12136148 -133453140 + (TTTTC)n Simple_repeat Simple_repeat 2 69 0 1894 117 22 104 chr10 12136148 12136263 -133453025 - MER4A LTR ERV1 -610 54 1 1771 95 61 23 chr10 12136795 12137059 -133452229 + AluSq SINE Alu 32 305 -8 849 129 117 37 chr10 12137243 12137332 -133451956 + MER45A DNA AcHobo 2 82 -1499 1783 153 24 7 chr10 12137332 12137627 -133451661 - AluJb SINE Alu -12 300 1 849 129 117 37 chr10 12137627 12137700 -133451588 + MER45A DNA AcHobo 82 177 -1 651 233 6 0 chr10 12137833 12138215 -133451073 + (CA)n Simple_repeat Simple_repeat 1 384 0 1917 145 30 0 chr10 12138373 12138669 -133450619 + AluJo SINE Alu 1 305 -7 339 289 39 78 chr10 12138999 12139179 -133450109 - L1M4 LINE L1 -6294 561 91 1900 131 20 33 chr10 12139276 12139581 -133449707 - AluJo SINE Alu -9 303 3 442 331 7 15 chr10 12140188 12140324 -133448964 + MIR3 SINE MIR 15 149 -59 404 194 0 14 chr10 12140331 12140403 -133448885 + AluJ/FLAM SINE Alu 2 72 -240 279 107 133 67 chr10 12140403 12140478 -133448810 + LTR8A LTR ERV1 489 568 -159 1785 159 0 28 chr10 12140615 12140928 -133448360 + AluJo SINE Alu 1 305 0 2315 102 3 3 chr10 12140966 12141269 -133448019 + AluSx SINE Alu 1 303 -9 1534 93 9 26 chr10 12141768 12141994 -133447294 - AluJo SINE Alu -90 222 1 2282 112 3 3 chr10 12142796 12143100 -133446188 - AluSg SINE Alu -6 304 1 798 148 33 0 chr10 12143100 12143222 -133446066 - FLAM_A SINE Alu -7 126 1 2538 51 0 7 chr10 12143237 12143532 -133445756 - AluY SINE Alu -18 293 1 417 223 58 58 chr10 12143533 12143721 -133445567 - L1ME3A LINE L1 -222 5948 5761 432 132 7 176 chr10 12143888 12143980 -133445308 + MLT1B LTR MaLR 3 109 -281 2018 108 11 0 chr10 12143980 12144258 -133445030 - AluSp SINE Alu -10 303 23 432 132 7 176 chr10 12144258 12144293 -133444995 + MLT1B LTR MaLR 109 109 -281 2761 132 26 0 chr10 12144293 12144716 -133444572 + L1PB3 LINE L1 5721 6154 0 25 65 0 0 chr10 12144723 12144769 -133444519 + AT_rich Low_complexity Low_complexity 1 46 0 1223 185 82 4 chr10 12144910 12145185 -133444103 + MLT1B LTR MaLR 95 396 0 416 276 86 33 chr10 12145186 12145396 -133443892 - L1ME3A LINE L1 -617 5547 5327 259 313 31 0 chr10 12145412 12145508 -133443780 - L1ME3A LINE L1 -860 5286 5188 564 55 0 0 chr10 12145515 12145588 -133443700 - L1PA5 LINE L1 -3 6151 6079 1996 125 14 17 chr10 12145600 12145888 -133443400 - AluSx SINE Alu -25 287 1 684 290 164 53 chr10 12145888 12145989 -133443299 - L1ME3A LINE L1 -1369 4777 4689 3564 119 29 2 chr10 12145989 12146500 -133442788 - MER1A DNA MER1_type -1 526 2 684 290 164 53 chr10 12146500 12146867 -133442421 - L1ME3A LINE L1 -1457 4689 4257 1023 145 63 26 chr10 12146867 12147153 -133442135 - MLT2A2 LTR ERVL 0 453 259 1114 158 20 184 chr10 12148407 12148749 -133440539 + AluJo SINE Alu 2 287 -15 21 0 0 0 chr10 12149811 12149832 -133439456 + AT_rich Low_complexity Low_complexity 1 21 0 2350 106 0 0 chr10 12149922 12150224 -133439064 - AluSx SINE Alu -10 302 1 476 257 54 13 chr10 12151552 12151700 -133437588 + MIR SINE MIR 41 197 -63 2372 95 3 3 chr10 12151960 12152266 -133437022 - AluSx SINE Alu -6 306 1 2476 73 3 0 chr10 12152309 12152610 -133436678 - AluY SINE Alu -9 302 1 1996 153 0 3 chr10 12152732 12153039 -133436249 - AluJb SINE Alu -6 306 1 2249 99 17 0 chr10 12154255 12154548 -133434740 - AluSx SINE Alu -14 298 1 3490 186 29 17 chr10 12154563 12154989 -133434299 + L1MB3 LINE L1 5476 5915 -268 2363 119 0 0 chr10 12154989 12155301 -133433987 + AluSx SINE Alu 1 312 0 3490 186 29 17 chr10 12155301 12155574 -133433714 + L1MB3 LINE L1 5915 6183 0 666 221 97 51 chr10 12156127 12156344 -133432944 + MLT1E1 LTR MaLR 1 227 -427 2285 95 0 0 chr10 12157472 12157756 -133431532 + AluSx SINE Alu 1 284 -28 237 323 30 30 chr10 12158078 12158177 -133431111 + L2 LINE L2 3144 3242 -30 2150 122 0 29 chr10 12158183 12158495 -133430793 - AluSq SINE Alu 0 313 11 2089 109 0 32 chr10 12158883 12159194 -133430094 - AluSx SINE Alu -1 311 11 873 201 13 0 chr10 12159312 12159471 -133429817 + AluJb SINE Alu 139 299 -13 2262 113 7 0 chr10 12159572 12159873 -133429415 + AluSq SINE Alu 1 303 -10 683 267 119 52 chr10 12159915 12160105 -133429183 - L1ME4a LINE L1 -77 6044 5868 2310 111 0 0 chr10 12160105 12160402 -133428886 - AluSx SINE Alu -15 297 1 683 267 119 52 chr10 12160402 12160706 -133428582 - L1ME4a LINE L1 -253 5868 5517 2181 107 0 7 chr10 12160711 12161009 -133428279 + AluSc SINE Alu 1 296 -13 2111 124 0 3 chr10 12161018 12161321 -133427967 + AluSx SINE Alu 1 302 0 23 33 0 0 chr10 12161405 12161435 -133427853 + AT_rich Low_complexity Low_complexity 1 30 0 309 339 96 28 chr10 12161744 12161802 -133427486 - L1ME4a LINE L1 -1059 5087 5034 1840 163 3 10 chr10 12161802 12162097 -133427191 - AluJb SINE Alu -13 299 7 309 339 96 28 chr10 12162097 12162256 -133427032 - L1ME4a LINE L1 -1112 5034 4855 290 257 54 0 chr10 12162448 12162522 -133426766 - MIR SINE MIR -89 173 96 2471 32 3 3 chr10 12162685 12162989 -133426299 - AluY SINE Alu 0 304 1 26 0 0 0 chr10 12163189 12163215 -133426073 + AT_rich Low_complexity Low_complexity 1 26 0 270 309 60 0 chr10 12163340 12163489 -133425799 - AluSp SINE Alu -49 254 97 2112 126 20 0 chr10 12163841 12164134 -133425154 - AluSx SINE Alu -13 299 1 208 322 8 25 chr10 12164406 12164527 -133424761 + CT-rich Low_complexity Low_complexity 4 122 0 1753 154 34 17 chr10 12164682 12164975 -133424313 + AluJo SINE Alu 1 298 -14 185 229 0 115 chr10 12165405 12165466 -133423822 + MIR SINE MIR 93 146 -116 307 247 103 10 chr10 12165714 12165811 -133423477 + MIR SINE MIR 98 203 -59 1760 157 0 52 chr10 12165933 12166239 -133423049 + AluJb SINE Alu 1 290 -22 22 56 0 0 chr10 12167592 12167628 -133421660 + AT_rich Low_complexity Low_complexity 1 36 0 3858 172 30 46 chr10 12169041 12169731 -133419557 - L1MB5 LINE L1 0 6174 5474 231 103 0 0 chr10 12169731 12169770 -133419518 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 2245 78 0 11 chr10 12169770 12170054 -133419234 - AluY SINE Alu -30 281 1 2053 150 0 3 chr10 12170054 12170354 -133418934 - AluJb SINE Alu -7 305 7 3858 172 30 46 chr10 12170354 12170509 -133418779 - L1MB5 LINE L1 -697 5477 5341 1896 161 3 0 chr10 12170857 12171142 -133418146 - AluJo SINE Alu -16 296 11 371 287 88 15 chr10 12171240 12171376 -133417912 + MIR3 SINE MIR 32 177 -31 2265 99 0 3 chr10 12171594 12171902 -133417386 + AluSx SINE Alu 1 307 0 243 339 61 57 chr10 12171949 12172194 -133417094 - L2 LINE L2 -59 3213 2968 1950 139 10 0 chr10 12172479 12172767 -133416521 + AluJo SINE Alu 3 293 -19 2183 126 3 0 chr10 12173010 12173312 -133415976 - AluSx SINE Alu -4 308 6 2398 167 19 19 chr10 12173317 12173790 -133415498 - L1PB4 LINE L1 -118 6038 5566 40 0 0 0 chr10 12175164 12175204 -133414084 + AT_rich Low_complexity Low_complexity 1 40 0 2066 133 0 34 chr10 12175995 12176318 -133412970 - AluSx SINE Alu 0 312 1 207 108 0 0 chr10 12176410 12176439 -133412849 + (T)n Simple_repeat Simple_repeat 1 32 -5 717 167 33 8 chr10 12176439 12176559 -133412729 + FLAM_A SINE Alu 1 123 -10 207 108 0 0 chr10 12176559 12176566 -133412722 + (T)n Simple_repeat Simple_repeat 31 37 0 2245 118 0 0 chr10 12176583 12176880 -133412408 + AluSq SINE Alu 1 297 -16 2102 116 0 4 chr10 12177159 12177436 -133411852 - AluSc SINE Alu -2 307 32 2183 113 7 7 chr10 12178292 12178594 -133410694 + AluSx SINE Alu 1 302 -10 2421 104 0 13 chr10 12178660 12178976 -133410312 + AluSx SINE Alu 1 312 0 210 192 96 19 chr10 12179579 12179631 -133409657 + L2 LINE L2 3217 3272 0 1225 115 0 0 chr10 12179873 12180038 -133409250 - AluSg/x SINE Alu -14 298 134 2267 117 0 0 chr10 12180038 12180336 -133408952 - AluSx SINE Alu -14 298 1 3218 190 82 20 chr10 12180653 12181338 -133407950 + MER44D DNA MER2_type 5 603 -2 514 293 101 12 chr10 12182354 12182718 -133406570 - L1ME LINE L1 -511 6049 5652 264 344 59 37 chr10 12182872 12183227 -133406061 + L1M4 LINE L1 4797 5159 -987 2319 99 7 0 chr10 12183384 12183678 -133405610 + AluSg SINE Alu 1 296 -14 213 39 0 0 chr10 12183761 12183787 -133405501 + (TTTTTA)n Simple_repeat Simple_repeat 3 28 0 180 0 0 0 chr10 12183899 12183919 -133405369 + (TTTTTA)n Simple_repeat Simple_repeat 3 22 0 1998 148 0 3 chr10 12183921 12184224 -133405064 - AluSx SINE Alu -4 308 7 1817 275 117 26 chr10 12184329 12184622 -133404666 - L1ME LINE L1 -2210 4330 4065 2297 91 16 3 chr10 12184622 12184930 -133404358 + AluSx SINE Alu 1 312 0 324 0 0 0 chr10 12184933 12184969 -133404319 + (TA)n Simple_repeat Simple_repeat 2 37 0 1817 275 117 26 chr10 12184969 12185898 -133403390 - L1ME LINE L1 -2476 4064 2992 1895 113 11 4 chr10 12185946 12186212 -133403076 + AluSx SINE Alu 29 296 -16 551 245 165 40 chr10 12186212 12186485 -133402803 - L1MEc LINE L1 -3944 2634 2290 192 217 0 0 chr10 12186796 12186842 -133402446 + (TATG)n Simple_repeat Simple_repeat 2 47 0 2509 58 0 0 chr10 12186906 12187198 -133402090 - AluY SINE Alu 0 311 20 1699 105 0 4 chr10 12187344 12187573 -133401715 + AluSc SINE Alu 69 296 -13 1115 150 0 0 chr10 12187573 12187733 -133401555 + AluSg/x SINE Alu 134 293 -19 1595 201 3 3 chr10 12187877 12188161 -133401127 - AluJo SINE Alu -28 284 1 1179 266 34 38 chr10 12188319 12188495 -133400793 - L1MC4a LINE L1 -1813 5995 5820 2268 114 0 0 chr10 12188495 12188792 -133400496 - AluSx SINE Alu -15 297 1 1179 266 34 38 chr10 12188792 12188928 -133400360 - L1MC4a LINE L1 -1988 5820 5685 511 141 0 0 chr10 12188928 12189006 -133400282 - MADE1 DNA Mariner -2 78 1 1179 266 34 38 chr10 12189006 12189188 -133400100 - L1MC4a LINE L1 -2123 5685 5502 411 312 58 0 chr10 12189219 12189357 -133399931 - L1MEc LINE L1 -4927 1794 1649 661 231 35 20 chr10 12189359 12189558 -133399730 - LTR33 LTR ERVL -19 502 301 321 235 87 26 chr10 12189637 12189752 -133399536 - LTR33 LTR ERVL -377 144 23 309 26 0 0 chr10 12189834 12189872 -133399416 + (TTCA)n Simple_repeat Simple_repeat 3 40 0 2208 105 0 0 chr10 12189872 12190157 -133399131 - AluSx SINE Alu -27 285 1 285 89 22 0 chr10 12190360 12190405 -133398883 - Alu SINE Alu -256 46 1 2330 94 0 0 chr10 12190830 12191156 -133398132 - AluSx SINE Alu 0 326 1 221 329 43 67 chr10 12191204 12191414 -133397874 + L2 LINE L2 2630 2834 -480 2463 76 0 3 chr10 12191594 12191896 -133397392 + AluSc SINE Alu 1 301 -8 220 308 33 44 chr10 12192012 12192103 -133397185 - MER5A DNA MER1_type -27 162 73 878 240 198 7 chr10 12192458 12192746 -133396542 + MSTD LTR MaLR 2 344 -52 1816 153 28 17 chr10 12193624 12193911 -133395377 + AluJb SINE Alu 1 290 -22 720 218 8 8 chr10 12194329 12194462 -133394826 + FLAM_C SINE Alu 1 133 0 1764 79 96 68 chr10 12195229 12195509 -133393779 - AluSg SINE Alu -22 288 1 358 23 0 0 chr10 12195509 12195553 -133393735 - AluY SINE Alu -257 44 1 2375 76 3 0 chr10 12195993 12196282 -133393006 + AluSx SINE Alu 1 290 -22 1613 179 10 13 chr10 12196994 12197296 -133391992 - AluJo SINE Alu -11 301 1 752 115 0 0 chr10 12197319 12197423 -133391865 - AluSg/x SINE Alu -88 222 119 2620 49 0 3 chr10 12197877 12198183 -133391105 + AluY SINE Alu 1 305 -6 696 194 0 16 chr10 12198328 12198457 -133390831 + FLAM_A SINE Alu 2 128 -5 2372 87 0 13 chr10 12200144 12200454 -133388834 + AluSx SINE Alu 1 306 -6 1952 141 30 17 chr10 12200617 12200915 -133388373 - AluSx SINE Alu -10 302 1 2385 105 0 0 chr10 12201414 12201718 -133387570 + AluSg SINE Alu 1 304 -6 1863 150 7 23 chr10 12201825 12202132 -133387156 + AluSx SINE Alu 1 302 -10 688 184 95 17 chr10 12202409 12202588 -133386700 - L1MB8 LINE L1 -5 6173 5981 2349 81 3 3 chr10 12203020 12203315 -133385973 + AluSg SINE Alu 1 295 -15 2219 112 14 0 chr10 12203509 12203803 -133385485 + AluSx SINE Alu 1 298 -14 345 254 204 11 chr10 12204309 12204490 -133384798 + MER58A DNA MER1_type 1 216 -8 322 220 33 55 chr10 12204559 12204650 -133384638 + L1ME LINE L1 4408 4496 -1650 662 195 85 12 chr10 12204658 12204822 -133384466 - MER5A DNA MER1_type -11 178 3 413 234 44 103 chr10 12204824 12205097 -133384191 + L1ME LINE L1 4493 4749 -1397 1642 206 0 7 chr10 12205099 12205395 -133383893 + AluJo SINE Alu 5 298 -14 484 141 87 0 chr10 12205413 12205505 -133383783 + Tigger4(Zombi) DNA MER2_type 2632 2731 0 284 236 0 0 chr10 12205516 12205588 -133383700 + L1ME LINE L1 5383 5454 -712 640 249 34 28 chr10 12206067 12206244 -133383044 + AluSq SINE Alu 121 298 -15 285 161 169 69 chr10 12206267 12206397 -133382891 - HAL1 LINE L1 -28 2479 2337 777 220 88 58 chr10 12206627 12206990 -133382298 - HAL1 LINE L1 -665 1842 1469 631 192 77 62 chr10 12206995 12207255 -133382033 - L1MC4 LINE L1 -3 8039 7776 2341 117 0 0 chr10 12207266 12207573 -133381715 - AluSx SINE Alu -5 307 1 1936 257 198 46 chr10 12207573 12208868 -133380420 - HAL1 LINE L1 -1015 1492 2 2570 68 0 3 chr10 12209667 12209975 -133379313 + AluY SINE Alu 1 307 -4 1650 129 39 0 chr10 12210092 12210324 -133378964 + AluSx SINE Alu 58 298 -14 823 147 123 0 chr10 12210324 12210487 -133378801 - Charlie3 DNA MER1_type -2527 183 1 1791 168 24 0 chr10 12210960 12211252 -133378036 - AluJo SINE Alu -12 300 2 2282 108 0 0 chr10 12211316 12211635 -133377653 - AluSx SINE Alu 0 312 1 27 100 0 0 chr10 12212670 12212760 -133376528 + GC_rich Low_complexity Low_complexity 1 90 0 1573 87 143 9 chr10 12215488 12215718 -133373570 - AluSg SINE Alu -49 261 1 1609 164 43 4 chr10 12216321 12216601 -133372687 + AluJb SINE Alu 10 300 -12 2267 88 7 0 chr10 12216779 12217074 -133372214 + AluY SINE Alu 2 298 -13 225 94 0 0 chr10 12217302 12217334 -133371954 + (AGGGGG)n Simple_repeat Simple_repeat 2 33 0 243 0 0 0 chr10 12219257 12219284 -133370004 + (TG)n Simple_repeat Simple_repeat 2 28 0 2030 110 10 0 chr10 12219284 12219574 -133369714 - AluSx SINE Alu -19 293 1 2162 50 28 62 chr10 12220843 12221165 -133368123 - AluY SINE Alu 0 311 1 259 262 36 48 chr10 12221224 12221308 -133367980 + MARNA DNA Mariner 268 350 -236 229 188 66 88 chr10 12221825 12222006 -133367282 + (CCAA)n Simple_repeat Simple_repeat 1 177 0 * 250 213 122 30 chr10 12221921 12222085 -133367203 + (CAGC)n Simple_repeat Simple_repeat 1 179 0 287 250 48 6 chr10 12222114 12222282 -133367006 + (CAGAC)n Simple_repeat Simple_repeat 4 178 0 * 328 171 122 37 chr10 12222189 12222353 -133366935 + (CCAA)n Simple_repeat Simple_repeat 1 178 0 202 164 90 30 chr10 12222380 12222447 -133366841 + (CCAA)n Simple_repeat Simple_repeat 3 73 0 359 185 140 13 chr10 12222458 12222615 -133366673 + (CAGC)n Simple_repeat Simple_repeat 1 177 0 295 290 69 8 chr10 12223690 12223821 -133365467 + MER5A DNA MER1_type 1 139 -50 351 336 52 9 chr10 12223903 12224019 -133365269 + L2 LINE L2 3148 3268 -4 287 257 246 38 chr10 12224303 12224591 -133364697 - L2 LINE L2 -28 3244 2897 274 244 165 63 chr10 12224692 12224819 -133364469 - L2 LINE L2 -3 3310 3171 339 259 51 19 chr10 12225088 12225246 -133364042 + (CTATA)n Simple_repeat Simple_repeat 4 166 0 354 237 43 11 chr10 12225823 12225916 -133363372 - MLT1I LTR MaLR 0 409 314 230 294 0 0 chr10 12226217 12226268 -133363020 - L2 LINE L2 -26 3246 3196 2497 226 89 50 chr10 12226391 12227109 -133362179 + MER63C DNA MER1_type 1 762 -298 2182 109 13 7 chr10 12227109 12227413 -133361875 + AluSx SINE Alu 1 306 -6 2497 226 89 50 chr10 12227413 12227581 -133361707 + MER63C DNA MER1_type 762 922 -8 337 301 23 0 chr10 12227998 12228171 -133361117 + G-rich Low_complexity Low_complexity 2 178 0 * 407 294 24 0 chr10 12228114 12228284 -133361004 + (GGATG)n Simple_repeat Simple_repeat 4 177 0 399 278 122 56 chr10 12229183 12229363 -133359925 - MIR SINE MIR -35 227 36 868 153 0 106 chr10 12230532 12230721 -133358567 + AluJb SINE Alu 5 173 -139 1591 237 125 76 chr10 12230734 12230897 -133358391 + L1MC4 LINE L1 6595 6749 -1293 1371 196 94 0 chr10 12230897 12231162 -133358126 + AluJb SINE Alu 1 290 -22 1591 237 125 76 chr10 12231162 12231647 -133357641 + L1MC4 LINE L1 6749 7209 -833 2280 93 0 0 chr10 12231647 12231947 -133357341 + AluY SINE Alu 1 300 -11 1591 237 125 76 chr10 12231947 12232113 -133357175 + L1MC4 LINE L1 7209 7365 -677 2053 123 7 7 chr10 12232113 12232421 -133356867 + AluSx SINE Alu 1 308 -4 1591 237 125 76 chr10 12232421 12232613 -133356675 + L1MC4 LINE L1 7365 7775 -267 429 252 27 0 chr10 12232731 12232842 -133356446 + L1MC4 LINE L1 7778 7891 -151 243 317 12 0 chr10 12232995 12233077 -133356211 - MIR SINE MIR -110 152 70 2210 98 7 0 chr10 12233224 12233519 -133355769 + AluSx SINE Alu 1 297 -15 878 322 38 25 chr10 12234879 12235007 -133354281 - MLT1J LTR MaLR -30 481 356 1594 215 65 0 chr10 12235007 12235332 -133353956 + MER7A DNA MER2_type 1 344 -2 878 322 38 25 chr10 12235332 12235569 -133353719 - MLT1J LTR MaLR -155 356 111 2228 71 0 0 chr10 12235656 12235976 -133353312 - AluY SINE Alu 0 320 1 198 0 0 0 chr10 12236145 12236167 -133353121 + (A)n Simple_repeat Simple_repeat 1 22 0 1782 136 0 4 chr10 12236170 12236442 -133352846 - AluSx SINE Alu -37 275 5 4156 149 63 23 chr10 12238403 12238859 -133350429 - L1PA15 LINE L1 -3 6162 5725 2282 71 7 3 chr10 12238859 12239156 -133350132 - AluY SINE Alu -13 298 1 2043 113 7 3 chr10 12239156 12239447 -133349841 - AluSq SINE Alu -12 301 9 4156 149 63 23 chr10 12239447 12239803 -133349485 - L1PA15 LINE L1 -439 5726 5317 23 0 0 0 chr10 12239988 12240011 -133349277 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr10 12240282 12240312 -133348976 + AT_rich Low_complexity Low_complexity 1 30 0 412 155 14 0 chr10 12240429 12240500 -133348788 + AluS SINE Alu 6 77 -236 296 67 22 0 chr10 12240630 12240675 -133348613 + AluSp/q SINE Alu 247 292 -11 197 395 42 17 chr10 12242223 12242342 -133346946 - MIR SINE MIR -29 233 112 2150 82 27 10 chr10 12242772 12243064 -133346224 - AluSc SINE Alu -12 297 1 2232 85 10 0 chr10 12243448 12243753 -133345535 + AluSg SINE Alu 1 308 -2 220 154 0 0 chr10 12244960 12244999 -133344289 + MER5A DNA MER1_type 68 106 -83 205 197 28 70 chr10 12244995 12245066 -133344222 - MER5A DNA MER1_type -114 75 8 * 189 277 46 0 chr10 12245100 12245165 -133344123 + L2 LINE L2 2992 3059 -213 234 0 0 0 chr10 12245201 12245227 -133344061 + (CA)n Simple_repeat Simple_repeat 1 26 0 1240 274 125 49 chr10 12245970 12246259 -133343029 + L1MD2 LINE L1 4058 4324 -1822 2115 122 6 6 chr10 12246259 12246570 -133342718 + AluSx SINE Alu 1 311 -1 1240 274 125 49 chr10 12246570 12246865 -133342423 + L1MD2 LINE L1 4324 4595 -1551 2145 104 0 0 chr10 12246865 12247153 -133342135 - AluSx SINE Alu -24 288 1 1240 274 125 49 chr10 12247153 12247526 -133341762 + L1MD2 LINE L1 4595 5089 -1057 285 111 37 0 chr10 12247531 12247585 -133341703 - Alu SINE Alu -2 298 243 1062 101 0 0 chr10 12247692 12247841 -133341447 + AluY SINE Alu 147 295 -16 1428 261 11 13 chr10 12247843 12248215 -133341073 + L1MD2 LINE L1 5320 5690 -669 1286 188 149 4 chr10 12248248 12248509 -133340779 + AluJb SINE Alu 1 299 -3 2095 117 7 0 chr10 12248509 12248807 -133340481 + AluSx SINE Alu 1 300 -12 1252 141 0 0 chr10 12248867 12249052 -133340236 + AluSx SINE Alu 3 187 -125 1034 279 117 31 chr10 12249111 12249731 -133339557 + L1MD2 LINE L1 5662 6344 -15 2387 52 0 43 chr10 12249731 12250055 -133339233 - AluY SINE Alu -1 310 1 1527 186 3 14 chr10 12251661 12251957 -133337331 + AluJb SINE Alu 5 297 -15 408 312 110 9 chr10 12251964 12252182 -133337106 - LTR16A LTR ERVL -148 302 63 261 328 39 23 chr10 12252271 12252399 -133336889 + L2 LINE L2 3173 3302 -11 2017 113 10 3 chr10 12253293 12253594 -133335694 + AluSq SINE Alu 2 304 -9 2317 89 7 0 chr10 12253615 12253919 -133335369 + AluSc SINE Alu 1 306 -3 500 255 94 26 chr10 12254493 12254542 -133334746 - MIR SINE MIR -2 260 216 2408 57 0 7 chr10 12254542 12254841 -133334447 + AluY SINE Alu 1 297 -14 500 255 94 26 chr10 12254841 12254983 -133334305 - MIR SINE MIR -46 216 56 372 244 71 31 chr10 12255877 12256004 -133333284 + L2 LINE L2 3137 3268 -4 2109 128 0 0 chr10 12256051 12256357 -133332931 + AluSx SINE Alu 1 306 -6 2184 68 17 10 chr10 12256424 12256716 -133332572 - AluY SINE Alu -17 294 1 1257 111 58 0 chr10 12256886 12257076 -133332212 + Tigger2a DNA MER2_type 1 201 -233 835 238 6 0 chr10 12257077 12257249 -133332039 - AluJb SINE Alu -2 310 138 846 150 48 0 chr10 12257253 12257420 -133331868 + Tigger2a DNA MER2_type 209 383 -61 2201 99 23 0 chr10 12257421 12257723 -133331565 + AluSq SINE Alu 1 309 -4 2146 112 3 0 chr10 12258160 12258456 -133330832 + AluSx SINE Alu 1 297 -15 181 237 0 118 chr10 12258522 12258598 -133330690 - MIR SINE MIR -20 242 176 393 234 70 31 chr10 12258603 12258731 -133330557 + L2 LINE L2 3136 3268 -4 1999 111 4 0 chr10 12258778 12259089 -133330199 + AluSx SINE Alu 1 312 0 1853 133 24 3 chr10 12259143 12259436 -133329852 + AluSx SINE Alu 6 304 -8 2209 128 48 57 chr10 12259662 12259859 -133329429 + Tigger2a DNA MER2_type 1 198 -2510 285 51 0 0 chr10 12259859 12259898 -133329390 + (TTTA)n Simple_repeat Simple_repeat 1 39 0 623 234 83 0 chr10 12259898 12260043 -133329245 - FAM SINE Alu -18 157 1 2209 128 48 57 chr10 12260043 12260213 -133329075 + Tigger2a DNA MER2_type 197 367 -2341 2127 100 3 0 chr10 12260213 12260504 -133328784 + AluSx SINE Alu 1 292 -20 2209 128 48 57 chr10 12260504 12260572 -133328716 + Tigger2a DNA MER2_type 367 434 0 2337 64 0 0 chr10 12261947 12262242 -133327046 - AluY SINE Alu -16 295 1 248 53 26 0 chr10 12262664 12262702 -133326586 + (CAAAAA)n Simple_repeat Simple_repeat 3 41 0 1153 214 97 0 chr10 12263753 12264042 -133325246 - MER2 DNA MER2_type -28 317 1 2122 218 28 15 chr10 12264174 12264633 -133324655 + MLT1C LTR MaLR 1 465 -2 1309 158 17 4 chr10 12265150 12265384 -133323904 + AluJo SINE Alu 72 308 -4 204 302 0 0 chr10 12265436 12265489 -133323799 + MER5A DNA MER1_type 13 65 -124 576 86 9 129 chr10 12265505 12265591 -133323697 + U6 snRNA snRNA 1 71 -36 2044 116 0 20 chr10 12265591 12265725 -133323563 + AluSx SINE Alu 5 140 -172 2250 66 31 0 chr10 12265725 12266014 -133323274 + AluSg1 SINE Alu 1 298 -11 2044 116 0 20 chr10 12266014 12266182 -133323106 + AluSx SINE Alu 140 301 -11 576 86 9 129 chr10 12266182 12266211 -133323077 + U6 snRNA snRNA 71 102 -5 23 0 0 0 chr10 12266211 12266234 -133323054 + AT_rich Low_complexity Low_complexity 1 23 0 1902 140 7 7 chr10 12266621 12266913 -133322375 + AluSx SINE Alu 2 293 -19 813 177 49 43 chr10 12266913 12267077 -133322211 - FRAM SINE Alu 0 166 2 2058 98 14 0 chr10 12267155 12267442 -133321846 - AluSq SINE Alu -22 291 1 401 213 52 66 chr10 12267790 12267926 -133321362 - L2 LINE L2 -1 3312 3179 694 340 128 31 chr10 12268121 12268962 -133320326 - L2 LINE L2 -449 2865 1943 504 90 26 0 chr10 12269680 12269758 -133319530 + MADE1 DNA Mariner 1 80 0 1786 119 0 4 chr10 12270426 12270677 -133318611 + AluSx SINE Alu 49 298 -14 2508 46 0 0 chr10 12270752 12271054 -133318234 + AluY SINE Alu 1 302 -9 21 0 0 0 chr10 12271170 12271191 -133318097 + AT_rich Low_complexity Low_complexity 1 21 0 2209 87 10 0 chr10 12271193 12271482 -133317806 + AluSx SINE Alu 1 292 -20 1604 172 0 15 chr10 12271731 12271993 -133317295 + AluJo SINE Alu 52 309 -3 717 266 155 4 chr10 12272579 12272805 -133316483 + MIR SINE MIR 2 261 -1 1651 157 41 31 chr10 12272820 12273113 -133316175 + AluJo SINE Alu 1 296 -16 302 247 14 0 chr10 12273456 12273529 -133315759 + Tigger3(Golem) DNA MER2_type 1 74 -2955 852 150 14 0 chr10 12273531 12273671 -133315617 + Tigger3(Golem) DNA MER2_type 2897 3038 0 2255 88 0 10 chr10 12274194 12274490 -133314798 + AluSc SINE Alu 1 293 -16 30 59 0 0 chr10 12275777 12275828 -133313460 + AT_rich Low_complexity Low_complexity 1 51 0 2408 99 0 0 chr10 12276909 12277213 -133312075 - AluSg SINE Alu -6 304 1 509 254 114 75 chr10 12277432 12277712 -133311576 + L2 LINE L2 3020 3310 -3 482 245 14 7 chr10 12277773 12277912 -133311376 - MER104 DNA Tc2 -13 167 28 263 274 147 11 chr10 12277966 12278061 -133311227 + L2 LINE L2 3118 3225 -88 2347 62 17 0 chr10 12278163 12278454 -133310834 - AluSp SINE Alu -17 296 1 2193 151 0 0 chr10 12278684 12278996 -133310292 + AluSx SINE Alu 1 312 0 4429 62 0 2 chr10 12279285 12279848 -133309440 - L1PA5 LINE L1 0 6154 5593 1988 114 4 0 chr10 12279948 12280220 -133309068 - AluSq SINE Alu -40 273 1 809 137 73 0 chr10 12280401 12280525 -133308763 - AluJb SINE Alu -51 261 129 1917 146 0 49 chr10 12280530 12280719 -133308569 - AluSp SINE Alu 0 313 145 2259 104 3 7 chr10 12280719 12281028 -133308260 - AluY SINE Alu -1 310 3 1917 146 0 49 chr10 12281028 12281167 -133308121 - AluSp SINE Alu -168 145 1 425 204 142 9 chr10 12281312 12281425 -133307863 - MIR SINE MIR 0 262 135 312 86 0 17 chr10 12281440 12281498 -133307790 - AluSp/q SINE Alu -1 302 246 2231 95 3 3 chr10 12281598 12281893 -133307395 + AluSg SINE Alu 1 295 -15 2081 130 7 3 chr10 12282561 12282860 -133306428 - AluSx SINE Alu -12 300 1 2251 89 0 13 chr10 12282866 12283168 -133306120 - AluSg SINE Alu -12 298 1 697 215 185 10 chr10 12283424 12283629 -133305659 + MIR SINE MIR 22 262 0 301 309 95 32 chr10 12283740 12283866 -133305422 + MIR SINE MIR 20 153 -109 324 252 126 8 chr10 12284052 12284179 -133305109 + L1ME4a LINE L1 5963 6104 -17 2113 126 0 7 chr10 12284228 12284542 -133304746 + AluSx SINE Alu 1 312 0 26 0 0 0 chr10 12284583 12284609 -133304679 + AT_rich Low_complexity Low_complexity 1 26 0 314 73 16 0 chr10 12284928 12284981 -133304307 + Alu SINE Alu 247 290 -12 1863 133 16 35 chr10 12287462 12287779 -133301509 - AluY SINE Alu 0 311 1 1611 129 112 24 chr10 12288118 12288405 -133300883 + AluSx SINE Alu 1 312 0 404 268 29 36 chr10 12288505 12288643 -133300645 - MIR SINE MIR -21 241 105 27 73 0 0 chr10 12288730 12288785 -133300503 + AT_rich Low_complexity Low_complexity 1 55 0 2251 91 0 17 chr10 12288893 12289190 -133300098 - AluSg SINE Alu -18 292 1 413 278 161 85 chr10 12289572 12289842 -133299446 + L2 LINE L2 2819 3140 -173 2012 119 25 3 chr10 12289842 12290127 -133299161 - AluSp SINE Alu -22 291 1 413 278 161 85 chr10 12290127 12290316 -133298972 + L2 LINE L2 3140 3313 0 454 307 59 85 chr10 12290329 12290589 -133298699 - L1M4 LINE L1 -2100 4046 3798 2305 93 0 0 chr10 12290589 12290878 -133298410 - AluY SINE Alu -22 289 1 454 307 59 85 chr10 12290878 12290992 -133298296 - L1M4 LINE L1 -2348 3798 3682 2221 80 10 0 chr10 12291136 12291424 -133297864 - AluSp SINE Alu -19 294 4 21 0 0 0 chr10 12291922 12291943 -133297345 + AT_rich Low_complexity Low_complexity 1 21 0 2104 98 0 0 chr10 12291943 12292219 -133297069 - AluSx SINE Alu -36 276 1 2071 104 16 35 chr10 12292694 12293010 -133296278 - AluY SINE Alu -1 310 1 225 328 148 16 chr10 12293010 12293127 -133296161 + MIR SINE MIR 96 228 -34 2398 78 0 10 chr10 12293350 12293656 -133295632 - AluSq SINE Alu -10 303 1 188 382 15 15 chr10 12293998 12294129 -133295159 + L2 LINE L2 821 951 -2363 748 293 170 24 chr10 12294129 12294635 -133294653 + L2 LINE L2 2079 2658 -656 563 316 172 16 chr10 12294688 12295061 -133294227 + L2 LINE L2 2883 3313 0 711 277 46 8 chr10 12295339 12295599 -133293689 + L2 LINE L2 1631 1900 -1414 2161 108 7 0 chr10 12295932 12296229 -133293059 + AluSx SINE Alu 1 299 -13 485 234 8 0 chr10 12297519 12297630 -133291658 - MIR SINE MIR -63 145 38 189 94 0 0 chr10 12297830 12297862 -133291426 + (A)n Simple_repeat Simple_repeat 1 32 0 1980 124 10 17 chr10 12298059 12298349 -133290939 + AluSx SINE Alu 6 293 -19 22 35 0 0 chr10 12298398 12298427 -133290861 + AT_rich Low_complexity Low_complexity 1 29 0 584 210 216 6 chr10 12298811 12298987 -133290301 + MIR SINE MIR 37 249 -13 739 133 0 42 chr10 12300665 12300785 -133288503 - FLAM_A SINE Alu -14 128 14 1785 151 11 0 chr10 12300850 12301121 -133288167 + AluSx SINE Alu 12 285 -27 1856 163 0 16 chr10 12301423 12301729 -133287559 + AluJo SINE Alu 5 305 -7 2327 115 0 0 chr10 12301885 12302190 -133287098 + AluSx SINE Alu 1 305 -7 247 317 0 0 chr10 12302287 12302391 -133286897 + CT-rich Low_complexity Low_complexity 3 106 0 188 361 46 0 chr10 12303335 12303443 -133285845 + L2 LINE L2 3189 3301 -12 291 315 0 0 chr10 12303447 12303520 -133285768 - MIR3 SINE MIR -4 204 132 423 261 80 60 chr10 12303650 12303849 -133285439 + L1ME4a LINE L1 5706 5908 -213 21 71 0 0 chr10 12303968 12304010 -133285278 + AT_rich Low_complexity Low_complexity 1 42 0 2326 110 0 0 chr10 12304843 12305152 -133284136 - AluSq SINE Alu -4 309 1 21 0 0 0 chr10 12306084 12306105 -133283183 + AT_rich Low_complexity Low_complexity 1 21 0 2452 76 0 0 chr10 12306259 12306563 -133282725 - AluY SINE Alu -7 304 1 189 318 0 0 chr10 12306815 12306859 -133282429 - L2 LINE L2 -10 3262 3219 413 254 197 0 chr10 12307046 12307168 -133282120 + MER5A DNA MER1_type 44 189 0 2110 123 0 3 chr10 12308140 12308433 -133280855 + AluSx SINE Alu 1 292 -20 249 33 0 0 chr10 12308433 12308463 -133280825 + (TA)n Simple_repeat Simple_repeat 2 31 0 845 148 0 22 chr10 12308483 12308618 -133280670 + FLAM_C SINE Alu 1 132 -1 2113 120 3 16 chr10 12309650 12309959 -133279329 + AluSx SINE Alu 1 305 -7 1027 216 0 0 chr10 12310629 12310814 -133278474 - AluJb SINE Alu -31 281 97 1882 133 4 7 chr10 12310914 12311185 -133278103 - AluSx SINE Alu -37 275 6 469 220 76 30 chr10 12311309 12311441 -133277847 + MIR SINE MIR 118 255 -7 879 99 0 25 chr10 12311441 12311562 -133277726 + FLAM_C SINE Alu 1 118 -25 1994 137 13 7 chr10 12312851 12313150 -133276138 + AluJb SINE Alu 1 301 -11 666 180 25 0 chr10 12313410 12313532 -133275756 - MER20 DNA MER1_type 0 219 95 1626 194 43 3 chr10 12313639 12313759 -133275529 + AluJo SINE Alu 2 116 -196 285 29 0 0 chr10 12313759 12313793 -133275495 + (TAAAA)n Simple_repeat Simple_repeat 1 34 0 1626 194 43 3 chr10 12313793 12313971 -133275317 + AluJo SINE Alu 116 312 0 897 162 10 76 chr10 12313979 12314176 -133275112 + FRAM SINE Alu 1 176 0 1988 157 7 0 chr10 12314183 12314482 -133274806 + AluJo SINE Alu 1 301 -11 547 319 93 42 chr10 12314482 12314911 -133274377 - L2 LINE L2 -21 3292 2842 339 299 103 0 chr10 12315029 12315136 -133274152 + L2 LINE L2 3196 3313 0 416 365 47 45 chr10 12315712 12316178 -133273110 + L2 LINE L2 2378 2844 -470 268 366 108 0 chr10 12316374 12316467 -133272821 + L2 LINE L2 3121 3223 -49 252 0 0 0 chr10 12316701 12316729 -133272559 + (TTCA)n Simple_repeat Simple_repeat 2 29 0 1216 171 155 4 chr10 12316729 12316974 -133272314 - AluJo SINE Alu -30 282 1 26 0 0 0 chr10 12316974 12317000 -133272288 + AT_rich Low_complexity Low_complexity 1 26 0 1020 134 6 28 chr10 12318149 12318328 -133270960 - Tigger4(Zombi) DNA MER2_type 0 2731 2557 320 267 10 0 chr10 12318428 12318529 -133270759 - L1ME LINE L1 -403 5718 5617 2356 84 0 0 chr10 12318764 12319063 -133270225 - AluY SINE Alu -12 299 1 391 192 0 40 chr10 12319066 12319165 -133270123 - MER103 DNA DNA -70 96 2 816 258 105 12 chr10 12319355 12319726 -133269562 - L1MEc LINE L1 -3348 2867 2455 2391 93 3 0 chr10 12319726 12320028 -133269260 - AluSp SINE Alu -10 303 1 816 258 105 12 chr10 12320028 12320056 -133269232 - L1MEc LINE L1 -3760 2455 2431 350 281 55 38 chr10 12320255 12320582 -133268706 - L1MEc LINE L1 -3806 2409 2117 1765 80 8 21 chr10 12320851 12321088 -133268200 - AluSq SINE Alu -8 305 72 11261 53 6 0 chr10 12321188 12322573 -133266715 - L1P LINE L1 -993 5153 3761 231 227 204 11 chr10 12322612 12322700 -133266588 + Charlie7 DNA MER1_type 1 105 -2507 * 339 228 72 33 chr10 12322675 12322855 -133266433 + Charlie7 DNA MER1_type 2420 2606 -6 987 177 0 12 chr10 12322917 12323081 -133266207 + FRAM SINE Alu 1 161 -15 319 268 251 36 chr10 12323117 12323310 -133265978 - L1ME4a LINE L1 -39 6082 5932 2227 90 3 29 chr10 12323310 12323620 -133265668 - AluSp SINE Alu -11 302 1 319 268 251 36 chr10 12323620 12323897 -133265391 - L1ME4a LINE L1 -189 5932 5511 24 0 0 0 chr10 12324612 12324636 -133264652 + AT_rich Low_complexity Low_complexity 1 24 0 454 330 17 23 chr10 12324636 12324809 -133264479 - MIR SINE MIR -30 232 61 388 238 25 49 chr10 12325571 12325693 -133263595 - MER103 DNA DNA -45 121 3 881 92 0 0 chr10 12327428 12327537 -133261751 + AluY SINE Alu 1 109 -202 1916 32 0 0 chr10 12327637 12327856 -133261432 - AluY SINE Alu -92 219 1 339 183 37 37 chr10 12328778 12328860 -133260428 + L1ME3 LINE L1 6016 6097 -65 1065 122 0 13 chr10 12328861 12329017 -133260271 + L1PA11 LINE L1 6021 6174 0 2212 124 0 13 chr10 12329148 12329462 -133259826 + AluSx SINE Alu 1 310 -2 1223 189 28 4 chr10 12329583 12329854 -133259434 + L1MC/D LINE L1 5141 5417 -743 439 109 0 93 chr10 12329855 12329978 -133259310 + MER2 DNA MER2_type 3 206 -139 1436 186 45 4 chr10 12329998 12330262 -133259026 - AluJo SINE Alu -22 290 16 848 181 0 0 chr10 12331010 12331137 -133258151 + FLAM_A SINE Alu 1 127 -6 2028 77 23 0 chr10 12332114 12332373 -133256915 + AluY SINE Alu 39 303 -8 2316 98 0 7 chr10 12332379 12332684 -133256604 + AluY SINE Alu 1 303 -8 24 0 0 0 chr10 12332769 12332793 -133256495 + AT_rich Low_complexity Low_complexity 1 24 0 532 306 62 65 chr10 12332970 12333536 -133255752 + HAL1b LINE L1 66 629 -719 2234 98 10 0 chr10 12333536 12333833 -133255455 + AluSq SINE Alu 1 300 -13 468 305 28 79 chr10 12334344 12334538 -133254750 + L1 LINE L1 2153 2322 -3824 2114 133 0 7 chr10 12334538 12334846 -133254442 + AluSx SINE Alu 1 306 -6 468 305 28 79 chr10 12334846 12335005 -133254283 + L1 LINE L1 2322 2488 -3658 1581 183 0 51 chr10 12335363 12335674 -133253614 + AluJo SINE Alu 1 295 -17 356 198 124 104 chr10 12335720 12335922 -133253366 + L1 LINE L1 3074 3279 -2867 230 238 36 24 chr10 12335941 12336025 -133253263 + L1MC/D LINE L1 5770 5854 -1954 284 220 38 119 chr10 12336275 12336386 -133252902 - L2 LINE L2 -4 3309 3213 2557 48 0 0 chr10 12336386 12336677 -133252611 + AluY SINE Alu 20 310 -1 284 220 38 119 chr10 12336677 12336724 -133252564 - L2 LINE L2 -100 3213 3164 290 256 139 0 chr10 12337061 12337147 -133252141 - L2 LINE L2 -29 3284 3187 2148 95 3 0 chr10 12337180 12337463 -133251825 + AluSg SINE Alu 6 289 -21 641 299 53 77 chr10 12337483 12337858 -133251430 + L2 LINE L2 2907 3272 0 2094 114 14 0 chr10 12338026 12338316 -133250972 - AluSx SINE Alu -18 294 1 21 0 0 0 chr10 12338663 12338684 -133250604 + AT_rich Low_complexity Low_complexity 1 21 0 789 179 138 60 chr10 12339777 12340045 -133249243 + LTR48 LTR ERV1 1 289 -498 284 169 15 62 chr10 12340211 12340276 -133249012 - FRAM/FAM SINE Alu -90 76 15 2322 84 0 7 chr10 12340316 12340615 -133248673 + AluY SINE Alu 5 301 -10 1219 114 6 0 chr10 12340616 12340782 -133248506 + AluSg/x SINE Alu 131 297 -13 863 223 66 86 chr10 12340785 12340973 -133248315 - Charlie1a DNA MER1_type -2462 299 118 2277 103 3 7 chr10 12340973 12341275 -133248013 + AluSg SINE Alu 1 301 -9 863 223 66 86 chr10 12341275 12341387 -133247901 - Charlie1a DNA MER1_type -2643 118 5 258 223 68 68 chr10 12342027 12342130 -133247158 + MLT1K LTR MaLR 11 113 -475 1591 185 49 0 chr10 12342239 12342363 -133246925 + AluJo SINE Alu 1 117 -195 309 51 0 0 chr10 12342363 12342402 -133246886 + (TAAAA)n Simple_repeat Simple_repeat 5 43 0 1591 185 49 0 chr10 12342402 12342564 -133246724 + AluJo SINE Alu 117 301 -11 2306 105 3 0 chr10 12342874 12343179 -133246109 + AluSq SINE Alu 1 306 -7 2138 117 0 0 chr10 12343730 12344020 -133245268 + AluSq SINE Alu 1 290 -23 230 313 16 0 chr10 12344169 12344233 -133245055 - MIR SINE MIR -160 102 38 261 288 0 0 chr10 12344243 12344309 -133244979 - L2 LINE L2 0 3313 3248 411 242 87 27 chr10 12344346 12344495 -133244793 - L2 LINE L2 -42 3271 3114 1739 170 0 53 chr10 12344508 12344826 -133244462 + AluJb SINE Alu 1 301 -11 23 0 0 0 chr10 12344826 12344849 -133244439 + AT_rich Low_complexity Low_complexity 1 23 0 27 0 0 0 chr10 12344965 12344992 -133244296 + AT_rich Low_complexity Low_complexity 1 27 0 703 75 64 0 chr10 12345101 12345195 -133244093 + MER30 DNA MER1_type 1 100 -130 1899 152 0 25 chr10 12345222 12345538 -133243750 - AluSx SINE Alu 0 312 5 1242 119 0 6 chr10 12346177 12346353 -133242935 + AluJb SINE Alu 3 177 -135 803 257 55 31 chr10 12346353 12346645 -133242643 - LTR21A LTR ERV1 -19 486 188 930 92 54 0 chr10 12346766 12346896 -133242392 + AluJb SINE Alu 172 308 -4 1005 112 0 14 chr10 12347329 12347472 -133241816 + AluSq/x SINE Alu 1 141 -171 1813 90 0 71 chr10 12347472 12347621 -133241667 + AluSp SINE Alu 1 124 -189 2553 63 0 0 chr10 12347621 12347921 -133241367 + AluY SINE Alu 1 300 -11 1813 90 0 71 chr10 12347921 12348037 -133241251 + AluSp SINE Alu 124 247 -66 1543 109 0 4 chr10 12348040 12348072 -133241216 + AluSg/x SINE Alu 83 114 -196 216 0 0 0 chr10 12348072 12348096 -133241192 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1543 109 0 4 chr10 12348096 12348292 -133240996 + AluSg/x SINE Alu 114 310 0 205 266 213 21 chr10 12348439 12348533 -133240755 + L2 LINE L2 3117 3228 -44 2113 85 0 46 chr10 12348831 12349138 -133240150 - AluSg SINE Alu -14 296 4 228 86 0 0 chr10 12349139 12349174 -133240114 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2371 65 3 0 chr10 12349182 12349472 -133239816 - AluSp SINE Alu -22 291 1 1046 103 0 0 chr10 12349472 12349608 -133239680 - AluSq/x SINE Alu -176 136 1 1586 143 10 57 chr10 12350628 12350942 -133238346 - AluJo SINE Alu -13 299 1 2133 122 0 7 chr10 12351598 12351893 -133237395 - AluSx SINE Alu -19 293 1 248 181 48 72 chr10 12352150 12352233 -133237055 - MLT1-int LTR MaLR -1290 81 1 767 233 99 15 chr10 12352292 12352494 -133236794 - MLT1J LTR MaLR -292 219 1 27 0 0 0 chr10 12352567 12352594 -133236694 + AT_rich Low_complexity Low_complexity 1 27 0 1245 112 0 103 chr10 12352594 12352818 -133236470 + AluSg SINE Alu 1 201 -109 743 168 0 0 chr10 12352818 12352931 -133236357 - AluSq/x SINE Alu -198 114 2 465 198 0 0 chr10 12353085 12353166 -133236122 - AluJ/FRAM SINE Alu -13 299 219 1586 160 19 4 chr10 12353291 12353547 -133235741 + AluSx SINE Alu 3 262 -50 237 276 31 55 chr10 12354315 12354442 -133234846 + L1MC5 LINE L1 7813 7936 -25 466 241 36 9 chr10 12354664 12354776 -133234512 - L2 LINE L2 -5 3308 3194 213 331 204 25 chr10 12354957 12355206 -133234082 - L2 LINE L2 -337 2977 2774 2124 125 13 3 chr10 12355206 12355510 -133233778 + AluSq SINE Alu 1 307 -6 213 331 204 25 chr10 12355510 12355613 -133233675 - L2 LINE L2 -540 2774 2562 21 0 0 0 chr10 12356007 12356028 -133233260 + AT_rich Low_complexity Low_complexity 1 21 0 1557 131 63 4 chr10 12356820 12357072 -133232216 - LTR24B LTR ERV1 -4 572 306 466 96 0 27 chr10 12357086 12357142 -133232146 - LTR24B LTR ERV1 -503 73 17 2143 119 0 7 chr10 12357142 12357437 -133231851 - AluSx SINE Alu -18 294 2 1943 162 0 10 chr10 12357438 12357747 -133231541 - AluJo SINE Alu -6 306 1 466 96 0 27 chr10 12357747 12357761 -133231527 - LTR24B LTR ERV1 -558 18 3 681 179 31 162 chr10 12358293 12358522 -133230766 + MER21B LTR ERV1 17 215 -648 * 832 171 66 7 chr10 12358521 12358673 -133230615 + MLT1A1 LTR MaLR 205 365 0 2134 102 0 3 chr10 12359124 12359447 -133229841 + AluY SINE Alu 1 322 0 1731 132 35 0 chr10 12359467 12359725 -133229563 - AluSx SINE Alu -13 299 33 583 275 65 55 chr10 12359888 12359924 -133229364 + L1ME4a LINE L1 5491 5525 -596 2299 114 0 0 chr10 12359924 12360231 -133229057 + AluY SINE Alu 1 307 -4 583 275 65 55 chr10 12360231 12360265 -133229023 + L1ME4a LINE L1 5525 5557 -564 3481 71 5 0 chr10 12360265 12360685 -133228603 - L1PA8 LINE L1 -14 6158 5737 583 275 65 55 chr10 12360685 12361016 -133228272 + L1ME4a LINE L1 5557 5897 -224 3204 238 91 62 chr10 12361082 12362565 -133226723 + L1MEc LINE L1 87 1615 -4781 1564 157 17 50 chr10 12362565 12362865 -133226423 - AluJo SINE Alu -22 290 1 3204 238 91 62 chr10 12362865 12362891 -133226397 + L1MEc LINE L1 1615 1639 -4757 1699 150 4 11 chr10 12362892 12363152 -133226136 + AluSx SINE Alu 1 258 -54 2329 78 4 0 chr10 12363243 12363544 -133225744 + AluSp SINE Alu 5 306 0 1801 107 31 24 chr10 12363652 12363942 -133225346 - AluSg SINE Alu -18 292 1 2321 94 7 0 chr10 12364233 12364530 -133224758 + AluSg SINE Alu 1 299 -11 2200 114 10 0 chr10 12364560 12364858 -133224430 + AluSx SINE Alu 1 301 -11 1431 49 0 0 chr10 12365562 12365726 -133223562 - L1PA7 LINE L1 0 6154 5991 183 42 0 0 chr10 12365731 12365755 -133223533 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1772 170 0 10 chr10 12365985 12366120 -133223168 + AluJb SINE Alu 1 136 -172 2203 129 0 0 chr10 12366120 12366422 -133222866 + AluSg SINE Alu 1 302 -8 1772 170 0 10 chr10 12366422 12366597 -133222691 + AluJb SINE Alu 136 308 0 1705 218 27 0 chr10 12366972 12367303 -133221985 - MER58B DNA MER1_type -1 340 1 21 0 0 0 chr10 12367439 12367460 -133221828 + AT_rich Low_complexity Low_complexity 1 21 0 2116 126 0 3 chr10 12367541 12367842 -133221446 - AluSx SINE Alu -10 302 3 24 32 0 0 chr10 12367849 12367880 -133221408 + AT_rich Low_complexity Low_complexity 1 31 0 2064 65 8 8 chr10 12368065 12368326 -133220962 - AluSp SINE Alu -8 305 45 899 234 96 25 chr10 12368446 12368685 -133220603 - MIR SINE MIR -5 257 2 221 331 137 0 chr10 12368943 12369067 -133220221 + MIR SINE MIR 60 200 -62 1551 160 60 32 chr10 12369067 12369349 -133219939 + AluJo SINE Alu 1 290 -22 2060 103 22 0 chr10 12369683 12369954 -133219334 + AluSx SINE Alu 1 277 -35 2042 118 7 3 chr10 12369955 12370252 -133219036 + AluSx SINE Alu 7 304 -8 25 0 0 0 chr10 12371138 12371163 -133218125 + AT_rich Low_complexity Low_complexity 1 25 0 2038 107 0 58 chr10 12371212 12371522 -133217766 + AluSc SINE Alu 1 292 -17 1730 167 13 7 chr10 12371528 12371833 -133217455 + AluJb SINE Alu 1 307 -5 696 189 24 0 chr10 12372000 12372127 -133217161 + AluJo SINE Alu 6 135 -177 2152 116 0 0 chr10 12372151 12372435 -133216853 + AluSx SINE Alu 5 288 -24 25 0 0 0 chr10 12372435 12372460 -133216828 + AT_rich Low_complexity Low_complexity 1 25 0 1765 171 10 7 chr10 12372472 12372777 -133216511 + AluJo SINE Alu 3 308 -4 2005 136 7 0 chr10 12373088 12373402 -133215886 + AluSx SINE Alu 1 316 0 702 327 44 29 chr10 12373457 12373622 -133215666 + L3 LINE CR1 559 720 -857 2118 127 3 0 chr10 12373622 12373913 -133215375 - AluJb SINE Alu -20 292 1 702 327 44 29 chr10 12373913 12374203 -133215085 + L3 LINE CR1 720 1021 -556 349 235 134 0 chr10 12374210 12374329 -133214959 + L3 LINE CR1 1146 1280 -297 197 244 0 0 chr10 12374357 12374398 -133214890 - MER5C DNA MER1_type -2 322 282 2308 108 0 7 chr10 12374466 12374772 -133214516 - AluSq SINE Alu -9 304 1 268 232 37 12 chr10 12374775 12374857 -133214431 - MER5C DNA MER1_type -204 120 37 271 347 68 32 chr10 12374888 12375139 -133214149 + L3 LINE CR1 1308 1567 -10 294 123 0 35 chr10 12376174 12376231 -133213057 - Alu SINE Alu -245 55 1 347 137 68 14 chr10 12376233 12376306 -133212982 - Alu SINE Alu -5 296 220 820 174 149 6 chr10 12376308 12376334 -133212954 + AluJo SINE Alu 85 106 -206 2305 89 0 10 chr10 12376334 12376637 -133212651 + AluY SINE Alu 8 307 -4 820 174 149 6 chr10 12376637 12376771 -133212517 + AluJo SINE Alu 106 268 -44 264 30 0 0 chr10 12376779 12376812 -133212476 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 219 200 80 0 chr10 12377050 12377100 -133212188 + MIR SINE MIR 209 262 0 1689 132 8 0 chr10 12377392 12377635 -133211653 + AluSx SINE Alu 54 298 -14 1942 153 7 0 chr10 12377652 12377947 -133211341 + AluSx SINE Alu 1 297 -15 2421 96 3 0 chr10 12377949 12378252 -133211036 + AluSp SINE Alu 1 304 -9 327 98 0 0 chr10 12378457 12378564 -133210724 - Alu SINE Alu 0 347 241 23 33 0 0 chr10 12378781 12378811 -133210477 + AT_rich Low_complexity Low_complexity 1 30 0 2335 95 7 0 chr10 12378844 12379139 -133210149 - AluSg SINE Alu -13 297 1 810 156 0 16 chr10 12379338 12379466 -133209822 - FLAM_C SINE Alu -7 126 1 2179 106 0 3 chr10 12380986 12381292 -133207996 + AluSx SINE Alu 1 305 0 21 0 0 0 chr10 12381437 12381458 -133207830 + AT_rich Low_complexity Low_complexity 1 21 0 289 74 0 56 chr10 12381791 12381845 -133207443 - AluJo SINE Alu -166 136 86 2174 126 13 0 chr10 12384037 12384339 -133204949 + AluSx SINE Alu 1 306 -6 1846 101 23 23 chr10 12384643 12384925 -133204363 + AluSx SINE Alu 29 310 0 2146 90 3 10 chr10 12384960 12385250 -133204038 + AluSc SINE Alu 1 288 -21 2350 77 10 0 chr10 12385250 12385550 -133203738 + AluY SINE Alu 1 303 -8 1533 147 48 8 chr10 12385883 12386134 -133203154 + AluJo SINE Alu 27 287 -25 2524 80 0 10 chr10 12386366 12386680 -133202608 + AluSp SINE Alu 1 311 -2 300 115 115 64 chr10 12386797 12386875 -133202413 + L1MC5 LINE L1 7834 7915 -46 1589 142 0 0 chr10 12386876 12387108 -133202180 + AluJo SINE Alu 67 298 -14 708 170 44 7 chr10 12387205 12387340 -133201948 + FAM SINE Alu 1 140 -45 515 273 0 0 chr10 12387477 12387598 -133201690 + FLAM_A SINE Alu 1 121 -12 1622 164 12 0 chr10 12387608 12387864 -133201424 + AluJb SINE Alu 1 259 -53 287 243 136 21 chr10 12387870 12388010 -133201278 - MIR SINE MIR -14 248 93 31 58 0 0 chr10 12388012 12388064 -133201224 + AT_rich Low_complexity Low_complexity 1 52 0 457 250 145 30 chr10 12388430 12388630 -133200658 + MIR SINE MIR 32 254 -8 1207 153 0 0 chr10 12388691 12388874 -133200414 - AluSg/x SINE Alu 0 310 128 2135 107 3 7 chr10 12388903 12389203 -133200085 + AluSx SINE Alu 1 299 -13 180 250 0 0 chr10 12389494 12389558 -133199730 + CT-rich Low_complexity Low_complexity 4 67 0 477 219 17 17 chr10 12390021 12390140 -133199148 - L1MC5 LINE L1 -14 7947 7829 731 243 24 44 chr10 12390533 12390739 -133198549 - MER20 DNA MER1_type 0 219 18 1017 157 51 0 chr10 12390750 12390928 -133198360 - MER3 DNA MER1_type -22 187 1 2199 128 3 0 chr10 12391125 12391423 -133197865 + AluSp SINE Alu 1 299 -14 1801 166 10 3 chr10 12391467 12391757 -133197531 - AluJb SINE Alu -13 299 8 1840 148 33 10 chr10 12391773 12392077 -133197211 - AluSx SINE Alu -1 311 1 2159 101 11 0 chr10 12392486 12392764 -133196524 + AluSx SINE Alu 1 281 -31 378 0 0 0 chr10 12392764 12392806 -133196482 + (CA)n Simple_repeat Simple_repeat 1 42 0 2177 110 3 0 chr10 12392832 12393131 -133196157 + AluSq SINE Alu 1 300 -13 28 29 0 0 chr10 12393181 12393216 -133196072 + AT_rich Low_complexity Low_complexity 1 35 0 701 158 0 33 chr10 12393230 12393350 -133195938 - FLAM_C SINE Alu -15 118 3 587 236 93 6 chr10 12393488 12393649 -133195639 - MIR SINE MIR -39 223 49 2271 91 7 3 chr10 12394008 12394305 -133194983 - AluSx SINE Alu -13 299 2 2358 91 0 10 chr10 12394524 12394833 -133194455 + AluSc SINE Alu 1 306 -3 253 345 84 14 chr10 12395051 12395193 -133194095 + MIR SINE MIR 25 176 -86 25 0 0 0 chr10 12398573 12398598 -133190690 + AT_rich Low_complexity Low_complexity 1 25 0 2419 66 0 7 chr10 12398647 12398948 -133190340 + AluY SINE Alu 1 299 -12 2231 104 3 10 chr10 12399091 12399400 -133189888 + AluSx SINE Alu 6 312 0 2318 83 13 0 chr10 12400396 12400698 -133188590 + AluSq SINE Alu 1 306 -7 2170 99 7 0 chr10 12400925 12401236 -133188052 + AluSq SINE Alu 1 313 0 212 279 33 0 chr10 12401236 12401297 -133187991 + MIR SINE MIR 188 250 -12 916 281 145 24 chr10 12401500 12401619 -133187669 - L2 LINE L2 -997 2317 2214 2283 109 0 0 chr10 12401619 12401922 -133187366 + AluSq SINE Alu 1 303 -10 916 281 145 24 chr10 12401922 12402353 -133186935 - L2 LINE L2 -1100 2214 1700 1805 144 10 22 chr10 12402417 12402595 -133186693 - AluSx SINE Alu -3 309 135 1979 137 3 7 chr10 12402595 12402895 -133186393 - AluSx SINE Alu -13 299 1 1805 144 10 22 chr10 12402895 12403029 -133186259 - AluSx SINE Alu -177 135 1 460 287 65 19 chr10 12403035 12403251 -133186037 - L2 LINE L2 -1884 1430 1205 2030 96 26 33 chr10 12403251 12403393 -133185895 + AluSx SINE Alu 1 142 -170 2019 134 7 3 chr10 12403393 12403685 -133185603 + AluSx SINE Alu 4 296 -16 2030 96 26 33 chr10 12403685 12403844 -133185444 + AluSx SINE Alu 142 300 -12 487 114 0 0 chr10 12404144 12404214 -133185074 + AluSg/x SINE Alu 198 267 -45 1727 91 8 25 chr10 12404214 12404455 -133184833 - AluSg SINE Alu -73 237 1 2590 64 0 3 chr10 12404467 12404779 -133184509 - AluY SINE Alu 0 311 1 2048 126 11 0 chr10 12404846 12405132 -133184156 - AluSx SINE Alu -23 289 1 2275 112 0 3 chr10 12405809 12406112 -133183176 - AluSx SINE Alu -10 302 1 2183 118 0 0 chr10 12406682 12406969 -133182319 - AluSx SINE Alu -25 287 1 2238 106 0 3 chr10 12407208 12407510 -133181778 - AluSx SINE Alu -11 301 1 2449 68 0 16 chr10 12407815 12408126 -133181162 + AluY SINE Alu 5 310 -1 1810 135 10 30 chr10 12408310 12408607 -133180681 + MER47A DNA MER2_type 1 291 -75 1156 105 58 0 chr10 12408607 12408798 -133180490 - L1PA11 LINE L1 -1 6173 5972 2238 76 4 0 chr10 12408804 12409080 -133180208 - AluY SINE Alu -3 308 32 280 294 103 8 chr10 12409244 12409370 -133179918 + MIR SINE MIR 78 215 -47 1732 145 7 38 chr10 12409529 12409819 -133179469 + AluJb SINE Alu 1 281 -31 2017 129 3 3 chr10 12409829 12410140 -133179148 - AluY SINE Alu 0 311 1 754 171 0 0 chr10 12410343 12410466 -133178822 - AluSg/x SINE Alu -17 293 171 1474 82 0 0 chr10 12410567 12410749 -133178539 - AluY SINE Alu -129 182 1 2502 69 0 3 chr10 12411092 12411395 -133177893 + AluY SINE Alu 1 302 -9 2136 113 0 0 chr10 12411586 12411919 -133177369 + AluSx SINE Alu 1 333 0 732 174 0 0 chr10 12412153 12412268 -133177020 - FLAM_A SINE Alu -17 116 2 2188 91 7 0 chr10 12412336 12412623 -133176665 - AluY SINE Alu -21 290 2 264 75 0 0 chr10 12412857 12412897 -133176391 - Alu SINE Alu -1 301 262 227 208 0 0 chr10 12412908 12412956 -133176332 + A-rich Low_complexity Low_complexity 1 48 0 27 0 0 0 chr10 12413075 12413102 -133176186 + AT_rich Low_complexity Low_complexity 1 27 0 816 124 41 0 chr10 12413161 12413282 -133176006 + AluJo SINE Alu 12 137 -175 1095 62 0 0 chr10 12413284 12413412 -133175876 + AluY SINE Alu 5 132 -179 1163 139 6 0 chr10 12413467 12413640 -133175648 + AluSg/x SINE Alu 125 298 -12 1380 132 71 5 chr10 12413690 12413902 -133175386 - AluSg/x SINE Alu -11 299 74 1322 135 14 9 chr10 12414628 12414843 -133174445 + AluSp SINE Alu 86 301 -12 197 254 60 0 chr10 12415012 12415079 -133174209 + L2 LINE L2 2062 2132 -1182 2077 124 3 7 chr10 12415128 12415427 -133173861 - AluSx SINE Alu -14 298 1 2226 120 7 0 chr10 12415430 12415730 -133173558 - AluSg SINE Alu -8 302 1 242 116 14 43 chr10 12415730 12415799 -133173489 + (TC)n Simple_repeat Simple_repeat 2 68 0 1253 225 93 25 chr10 12415801 12416166 -133173122 + MLT1F1 LTR MaLR 177 566 -1 2023 157 0 0 chr10 12416197 12416496 -133172792 + AluJo SINE Alu 1 299 -13 696 206 22 22 chr10 12416655 12416791 -133172497 - AluJo SINE Alu -176 136 1 2114 120 0 7 chr10 12416810 12417111 -133172177 - AluSx SINE Alu -3 309 11 1022 271 204 21 chr10 12417500 12417556 -133171732 - L2 LINE L2 -1757 1557 1513 2387 99 0 6 chr10 12417556 12417868 -133171420 + AluSq SINE Alu 1 310 -3 1022 271 204 21 chr10 12417868 12418423 -133170865 - L2 LINE L2 -1801 1513 834 868 230 61 90 chr10 12418494 12418784 -133170504 + L1MC4a LINE L1 5458 5736 -2072 2455 68 3 10 chr10 12418784 12419092 -133170196 + AluY SINE Alu 1 306 -5 868 230 61 90 chr10 12419092 12419180 -133170108 + L1MC4a LINE L1 5736 5825 -1983 1226 167 0 10 chr10 12419183 12419375 -133169913 + AluJo SINE Alu 1 190 -122 971 161 12 0 chr10 12420362 12420523 -133168765 + AluSq SINE Alu 135 297 -16 1941 104 49 36 chr10 12420558 12420865 -133168423 - AluSq SINE Alu -2 311 1 352 310 6 25 chr10 12420893 12421051 -133168237 - L2 LINE L2 -2174 1140 986 2057 101 27 20 chr10 12421111 12421249 -133168039 + AluSx SINE Alu 1 137 -175 2051 130 7 3 chr10 12421249 12421542 -133167746 + AluSx SINE Alu 4 297 -15 2057 101 27 20 chr10 12421542 12421563 -133167725 + AluSx SINE Alu 137 299 -13 1068 73 0 0 chr10 12421563 12421700 -133167588 + AluSg/x SINE Alu 163 299 -13 604 312 42 17 chr10 12421855 12422092 -133167196 + MIR SINE MIR 20 262 0 1641 134 67 4 chr10 12422278 12422575 -133166713 + AluSq SINE Alu 1 285 -28 210 345 175 26 chr10 12422689 12422883 -133166405 + L2 LINE L2 2755 2977 -337 2209 77 25 0 chr10 12423064 12423350 -133165938 + AluSg SINE Alu 1 293 -17 2461 55 3 3 chr10 12423553 12423864 -133165424 + AluY SINE Alu 1 311 0 1700 147 0 38 chr10 12423873 12424165 -133165123 - AluJb SINE Alu -31 281 1 347 303 200 6 chr10 12424324 12424489 -133164799 - MIR SINE MIR -47 215 19 2154 79 0 0 chr10 12424614 12424894 -133164394 + AluY SINE Alu 32 311 0 194 274 48 48 chr10 12426202 12426286 -133163002 - MIR SINE MIR -86 176 93 221 337 6 25 chr10 12427668 12427831 -133161457 + CT-rich Low_complexity Low_complexity 5 164 0 420 138 0 58 chr10 12428301 12428334 -133160954 - AluSp SINE Alu -147 166 133 1891 130 7 7 chr10 12428334 12428633 -133160655 - AluSx SINE Alu -13 299 1 420 138 0 58 chr10 12428633 12428686 -133160602 - AluSp SINE Alu -180 133 85 28 29 0 0 chr10 12430856 12430891 -133158397 + AT_rich Low_complexity Low_complexity 1 35 0 1437 130 79 7 chr10 12430957 12431234 -133158054 - AluSg SINE Alu 0 300 4 243 88 0 0 chr10 12431572 12431606 -133157682 + (TGAA)n Simple_repeat Simple_repeat 3 36 0 722 57 0 71 chr10 12431871 12432012 -133157276 - AluSc SINE Alu -6 303 173 356 288 10 35 chr10 12432162 12432412 -133156876 + CT-rich Low_complexity Low_complexity 1 243 0 1966 92 6 63 chr10 12435307 12435623 -133153665 + AluY SINE Alu 1 298 -13 1032 174 85 9 chr10 12435668 12435880 -133153408 + AluJb SINE Alu 3 230 -82 180 200 0 0 chr10 12436715 12436755 -133152533 + A-rich Low_complexity Low_complexity 3 42 0 1479 180 24 7 chr10 12437032 12437327 -133151961 - AluJo SINE Alu -12 300 1 2147 117 0 0 chr10 12437473 12437773 -133151515 + AluSx SINE Alu 1 300 -12 270 0 0 0 chr10 12438440 12438470 -133150818 + (TG)n Simple_repeat Simple_repeat 1 30 0 1756 150 7 7 chr10 12438645 12438938 -133150350 - AluJo SINE Alu -19 293 1 1208 286 198 7 chr10 12438938 12439505 -133149783 + L2 LINE L2 1033 1707 -1607 1109 114 12 0 chr10 12439505 12439672 -133149616 + AluSx SINE Alu 1 169 -143 404 116 14 0 chr10 12439818 12439887 -133149401 + AluS SINE Alu 230 299 -10 2011 113 0 0 chr10 12440078 12440405 -133148883 + AluSx SINE Alu 1 327 0 545 129 35 0 chr10 12440807 12440892 -133148396 + FLAM_C SINE Alu 24 111 -32 216 0 0 0 chr10 12440939 12440963 -133148325 + (A)n Simple_repeat Simple_repeat 1 24 0 1988 123 0 23 chr10 12440963 12441265 -133148023 + AluSx SINE Alu 6 300 -12 1812 161 0 13 chr10 12441267 12441577 -133147711 + AluJb SINE Alu 1 306 -6 1933 147 10 0 chr10 12441577 12441877 -133147411 + AluSx SINE Alu 1 303 -9 607 103 0 0 chr10 12441888 12441966 -133147322 + U6 snRNA snRNA 1 78 -29 2181 123 0 0 chr10 12442037 12442339 -133146949 + AluSx SINE Alu 1 302 -10 834 195 61 6 chr10 12442341 12442505 -133146783 + AluSg/x SINE Alu 135 307 -3 503 185 167 0 chr10 12442726 12442834 -133146454 - MER96 DNA MER1_type? 0 175 50 1911 130 3 13 chr10 12442871 12443170 -133146118 + AluSx SINE Alu 1 296 -16 2346 46 0 0 chr10 12443172 12443457 -133145831 + AluY SINE Alu 1 285 -26 342 0 0 0 chr10 12443457 12443495 -133145793 + (CCAA)n Simple_repeat Simple_repeat 2 39 0 2140 101 3 0 chr10 12443663 12443959 -133145329 + AluSx SINE Alu 1 297 -15 432 130 0 0 chr10 12444157 12444226 -133145062 + Alu SINE Alu 234 302 -8 1612 175 20 0 chr10 12444322 12444614 -133144674 - AluJo SINE Alu -14 298 1 2087 126 0 0 chr10 12444760 12445061 -133144227 + AluSx SINE Alu 1 301 -11 198 0 0 0 chr10 12445726 12445748 -133143540 + (TG)n Simple_repeat Simple_repeat 1 22 0 1756 150 7 7 chr10 12445924 12446217 -133143071 - AluJo SINE Alu -19 293 1 1642 250 127 123 chr10 12446217 12446784 -133142504 + L2 LINE L2 1033 1596 -1718 1914 138 0 3 chr10 12446784 12447089 -133142199 + AluSx SINE Alu 1 304 -8 1642 250 127 123 chr10 12447089 12447186 -133142102 + L2 LINE L2 1596 1691 -1623 1782 150 7 26 chr10 12447186 12447493 -133141795 - AluSx SINE Alu -11 301 1 1642 250 127 123 chr10 12447493 12447507 -133141781 + L2 LINE L2 1691 1703 -1611 1180 176 30 4 chr10 12447507 12447740 -133141548 + L1MA7 LINE L1 6049 6287 -4 1642 250 127 123 chr10 12447740 12447780 -133141508 + L2 LINE L2 1703 1741 -1573 1280 122 61 65 chr10 12447780 12447942 -133141346 + MER30 DNA MER1_type 1 163 -67 2234 79 3 0 chr10 12447942 12448234 -133141054 - AluY SINE Alu -18 293 1 1280 122 61 65 chr10 12448234 12448300 -133140988 + MER30 DNA MER1_type 163 228 -2 1642 250 127 123 chr10 12448300 12448423 -133140865 + L2 LINE L2 1741 1862 -1452 195 42 0 0 chr10 12448423 12448447 -133140841 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 792 74 0 0 chr10 12448450 12448545 -133140743 - FLAM_C SINE Alu -24 119 25 1642 250 127 123 chr10 12448545 12448832 -133140456 + L2 LINE L2 1863 2268 -1046 242 229 16 0 chr10 12448933 12448994 -133140294 + (TCTA)n Simple_repeat Simple_repeat 4 65 0 380 264 25 126 chr10 12449028 12449072 -133140216 + L1MC4 LINE L1 7826 7873 -169 1803 129 32 4 chr10 12449072 12449382 -133139906 - AluSx SINE Alu 0 318 1 380 264 25 126 chr10 12449382 12449574 -133139714 + L1MC4 LINE L1 7873 8040 -2 187 203 34 85 chr10 12449661 12449674 -133139614 + MER5A DNA MER1_type 134 146 -43 1926 131 3 7 chr10 12449674 12449979 -133139309 + AluSx SINE Alu 1 304 -8 187 203 34 85 chr10 12449979 12450024 -133139264 + MER5A DNA MER1_type 146 189 0 2030 127 0 0 chr10 12450537 12450829 -133138459 + AluSx SINE Alu 1 292 -20 2282 87 0 6 chr10 12450969 12451281 -133138007 + AluY SINE Alu 1 310 -1 2194 109 3 0 chr10 12452130 12452441 -133136847 - AluSq SINE Alu -1 312 1 1782 139 38 7 chr10 12452648 12452935 -133136353 + AluJo SINE Alu 1 296 -16 1759 114 57 0 chr10 12453120 12453383 -133135905 + AluSx SINE Alu 26 303 -9 279 207 171 64 chr10 12453402 12453542 -133135746 + L1MC4 LINE L1 7744 7898 -144 758 168 0 0 chr10 12453544 12453669 -133135619 + AluJb SINE Alu 184 308 -4 1977 176 18 18 chr10 12453747 12453781 -133135507 + L1MB7 LINE L1 5794 5827 -357 1770 160 17 0 chr10 12453781 12454069 -133135219 + AluSx SINE Alu 1 293 -19 1977 176 18 18 chr10 12454069 12454425 -133134863 + L1MB7 LINE L1 5826 6184 0 1406 198 7 4 chr10 12454439 12454717 -133134571 + AluJo SINE Alu 1 279 -33 372 43 0 0 chr10 12454717 12454763 -133134525 + (CA)n Simple_repeat Simple_repeat 1 46 0 1990 124 11 0 chr10 12455032 12455314 -133133974 - AluSx SINE Alu -27 285 1 1180 176 30 4 chr10 12455328 12455561 -133133727 + L1MA7 LINE L1 6049 6287 -4 1107 96 78 6 chr10 12455603 12455769 -133133519 + MER30 DNA MER1_type 1 178 -52 314 125 0 0 chr10 12455873 12455921 -133133367 + Alu SINE Alu 252 299 -3 1961 179 18 18 chr10 12456008 12456042 -133133246 + L1MB7 LINE L1 5794 5827 -357 1770 160 17 0 chr10 12456042 12456330 -133132958 + AluSx SINE Alu 1 293 -19 1961 179 18 18 chr10 12456330 12456686 -133132602 + L1MB7 LINE L1 5826 6184 0 355 160 0 0 chr10 12456700 12456750 -133132538 + Alu SINE Alu 1 50 -251 896 106 0 0 chr10 12456751 12456874 -133132414 + AluSg/x SINE Alu 159 281 -29 243 88 0 0 chr10 12456874 12456908 -133132380 + (TGAA)n Simple_repeat Simple_repeat 3 36 0 2293 96 0 0 chr10 12457173 12457476 -133131812 - AluSc SINE Alu -6 303 1 1530 204 7 3 chr10 12457718 12458017 -133131271 + AluSx SINE Alu 1 300 -12 2061 84 66 0 chr10 12459058 12459345 -133129943 + AluSg SINE Alu 1 306 -4 2035 126 3 0 chr10 12459538 12459840 -133129448 + AluSx SINE Alu 1 303 -9 1104 145 0 25 chr10 12460671 12460871 -133128417 - AluSx SINE Alu -117 195 1 267 257 111 42 chr10 12460871 12461015 -133128273 + L1ME3A LINE L1 5922 6075 -95 1667 187 3 7 chr10 12461077 12461387 -133127901 - AluJo SINE Alu -3 309 1 2084 115 3 0 chr10 12461416 12461712 -133127576 + AluSx SINE Alu 6 302 -10 420 235 0 0 chr10 12461774 12461855 -133127433 - MER81 DNA DNA -33 81 1 194 241 19 19 chr10 12462139 12462193 -133127095 + L2 LINE L2 3256 3309 -4 2108 125 0 3 chr10 12462705 12463016 -133126272 + AluSq SINE Alu 4 313 0 593 195 0 8 chr10 12463044 12463162 -133126126 + L1MB5 LINE L1 6050 6166 -8 31 44 0 0 chr10 12463181 12463226 -133126062 + AT_rich Low_complexity Low_complexity 1 45 0 1352 154 135 0 chr10 12463626 12463893 -133125395 + AluJb SINE Alu 1 303 -9 430 208 21 0 chr10 12464146 12464242 -133125046 - Charlie5 DNA MER1_type -27 2585 2488 1239 101 6 0 chr10 12464242 12464420 -133124868 - AluSg/x SINE Alu -5 305 127 1682 82 0 43 chr10 12464433 12464715 -133124573 - AluY SINE Alu 0 311 42 1863 110 3 69 chr10 12465046 12465228 -133124060 - AluSx SINE Alu -14 298 144 2554 36 3 0 chr10 12465228 12465537 -133123751 - AluY SINE Alu -1 310 1 1863 110 3 69 chr10 12465537 12465672 -133123616 - AluSx SINE Alu -168 144 2 896 190 39 3 chr10 12465672 12465900 -133123388 - MER33 DNA MER1_type -259 65 1 1671 129 0 30 chr10 12466128 12466392 -133122896 + AluSx SINE Alu 1 256 -56 1815 128 0 62 chr10 12466434 12466740 -133122548 + AluSx SINE Alu 3 289 -23 506 251 157 45 chr10 12467115 12467338 -133121950 + MIR SINE MIR 15 262 0 1353 177 29 42 chr10 12467588 12467727 -133121561 + AluJb SINE Alu 1 140 -172 2189 107 0 0 chr10 12467727 12468025 -133121263 + AluSq SINE Alu 1 298 -15 1353 177 29 42 chr10 12468025 12468195 -133121093 + AluJb SINE Alu 140 306 -6 810 132 0 21 chr10 12468243 12468387 -133120901 - AluSp/q SINE Alu -6 307 167 29 70 0 0 chr10 12469468 12469525 -133119763 + GC_rich Low_complexity Low_complexity 1 57 0 1127 133 40 0 chr10 12469571 12469744 -133119544 - AluY SINE Alu -129 182 3 1573 128 163 4 chr10 12469969 12470227 -133119061 + AluSx SINE Alu 1 299 -3 24 0 0 0 chr10 12470263 12470287 -133119001 + AT_rich Low_complexity Low_complexity 1 24 0 860 171 0 74 chr10 12470582 12470758 -133118530 - AluSg/x SINE Alu -13 299 137 2311 167 18 58 chr10 12470913 12471095 -133118193 + L1MA4 LINE L1 5768 5956 -344 2136 102 0 7 chr10 12471095 12471398 -133117890 + AluSq SINE Alu 1 301 -12 2311 167 18 58 chr10 12471398 12471766 -133117522 + L1MA4 LINE L1 5956 6296 -4 1537 167 7 24 chr10 12471871 12472182 -133117106 - AluJo SINE Alu 0 306 1 21 0 0 0 chr10 12472182 12472203 -133117085 + AT_rich Low_complexity Low_complexity 1 21 0 825 174 0 0 chr10 12472210 12472342 -133116946 + FRAM SINE Alu 9 140 -36 816 165 7 14 chr10 12472355 12472538 -133116750 + AluSg/x SINE Alu 156 296 -16 203 286 96 70 chr10 12472646 12472845 -133116443 - L2 LINE L2 -5 3308 3105 1905 126 17 0 chr10 12472948 12473242 -133116046 + AluSx SINE Alu 1 299 -13 825 160 17 40 chr10 12473419 12473594 -133115694 - AluJo SINE Alu -57 255 85 363 216 82 10 chr10 12473829 12473926 -133115362 + MLT1G3 LTR MaLR 1 104 -491 440 197 210 4 chr10 12473982 12474170 -133115118 + MLT1G3 LTR MaLR 170 442 -148 1739 165 0 19 chr10 12474257 12474573 -133114715 + AluJo SINE Alu 1 310 -2 2518 39 0 13 chr10 12474752 12475063 -133114225 + AluY SINE Alu 1 307 -4 209 218 0 46 chr10 12475438 12475525 -133113763 + (CGGGG)n Simple_repeat Simple_repeat 2 84 0 494 55 96 0 chr10 12476590 12476663 -133112625 + MADE1 DNA Mariner 1 80 0 2037 107 0 0 chr10 12476733 12477023 -133112265 + AluSx SINE Alu 5 294 -18 601 84 21 0 chr10 12477519 12477614 -133111674 - AluY SINE Alu -2 309 213 988 108 0 0 chr10 12477770 12477918 -133111370 + AluSg/x SINE Alu 149 296 -14 2022 130 0 0 chr10 12477933 12478232 -133111056 + AluSx SINE Alu 1 299 -13 2361 32 0 3 chr10 12479604 12479909 -133109379 - AluY SINE Alu 0 304 1 1415 91 5 23 chr10 12480373 12480593 -133108695 + AluSg/x SINE Alu 87 302 -8 1920 74 19 11 chr10 12480707 12480977 -133108311 + L1PA8 LINE L1 5895 6166 -6 24 0 0 0 chr10 12480977 12481001 -133108287 + AT_rich Low_complexity Low_complexity 1 24 0 2046 185 5 20 chr10 12481111 12481516 -133107772 - L1PB4 LINE L1 0 6156 5758 192 217 0 0 chr10 12481526 12481572 -133107716 + (TG)n Simple_repeat Simple_repeat 1 46 0 1458 166 19 60 chr10 12481957 12482127 -133107161 - AluSx SINE Alu 0 302 149 1645 145 4 22 chr10 12482127 12482270 -133107018 - AluSx SINE Alu -37 275 138 2085 128 3 0 chr10 12482270 12482582 -133106706 - AluSq SINE Alu 0 313 1 1645 145 4 22 chr10 12482582 12482714 -133106574 - AluSx SINE Alu -174 138 5 1458 166 19 60 chr10 12482714 12482857 -133106431 - AluSx SINE Alu -153 149 2 1391 185 57 10 chr10 12482959 12483257 -133106031 - AluJb SINE Alu 0 312 1 190 269 0 0 chr10 12483323 12483375 -133105913 + MIR SINE MIR 156 207 -55 1999 120 3 0 chr10 12483377 12483661 -133105627 + AluSx SINE Alu 1 285 -27 225 83 0 0 chr10 12483661 12483697 -133105591 + (CATA)n Simple_repeat Simple_repeat 2 37 0 2049 222 67 39 chr10 12484038 12484605 -133104683 - L1ME2 LINE L1 -12 6152 5564 2085 96 0 0 chr10 12484605 12484914 -133104374 - AluSx SINE Alu 0 309 1 2049 222 67 39 chr10 12484914 12484958 -133104330 - L1ME2 LINE L1 -600 5564 5523 2195 83 0 32 chr10 12485184 12485318 -133103970 + AluSx SINE Alu 2 139 -173 2352 77 0 0 chr10 12485318 12485628 -133103660 + AluY SINE Alu 1 310 -1 2195 83 0 32 chr10 12485628 12485805 -133103483 + AluSx SINE Alu 139 303 -9 496 295 115 53 chr10 12485805 12486127 -133103161 - MER93a LTR ERV1 -60 342 1 2004 110 0 17 chr10 12486425 12486715 -133102573 - AluY SINE Alu -26 285 1 1940 137 0 0 chr10 12486716 12487015 -133102273 - AluSx SINE Alu -13 299 1 341 221 61 72 chr10 12487343 12487524 -133101764 - L1ME4a LINE L1 -16 6105 5927 869 204 57 28 chr10 12487539 12487658 -133101630 - MER20 DNA MER1_type -1 218 89 1766 178 58 76 chr10 12487658 12488108 -133101180 - LTR47B LTR ERVL 0 443 2 869 204 57 28 chr10 12488108 12488199 -133101089 - MER20 DNA MER1_type -130 89 2 261 235 61 31 chr10 12488200 12488298 -133100990 - L1ME4a LINE L1 -238 5883 5783 452 218 55 0 chr10 12488413 12488523 -133100765 - L1MB2 LINE L1 0 6171 6056 230 211 10 77 chr10 12488559 12488663 -133100625 + T-rich Low_complexity Low_complexity 6 102 0 809 89 27 0 chr10 12488778 12488890 -133100398 - AluSg/x SINE Alu -19 291 177 2078 108 7 0 chr10 12489272 12489558 -133099730 + AluSx SINE Alu 5 292 -20 1064 145 62 10 chr10 12489744 12489937 -133099351 - AluJo SINE Alu -109 203 1 267 187 45 75 chr10 12490124 12490258 -133099030 - L1ME4a LINE L1 -152 5969 5840 520 254 31 15 chr10 12490291 12490421 -133098867 - L2 LINE L2 -2 3311 3180 553 256 63 74 chr10 12490423 12490586 -133098702 - L2 LINE L2 -251 3062 2895 1703 151 7 3 chr10 12490586 12490877 -133098411 + AluJb SINE Alu 1 292 -20 553 256 63 74 chr10 12490877 12491031 -133098257 - L2 LINE L2 -418 2895 2741 631 279 113 38 chr10 12491073 12491464 -133097824 - L1ME4a LINE L1 -388 5733 5314 469 231 0 0 chr10 12491481 12491585 -133097703 + U13 snRNA snRNA 1 104 0 207 0 0 0 chr10 12491831 12491854 -133097434 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 1900 113 7 4 chr10 12491863 12492138 -133097150 - AluSq SINE Alu -37 276 1 571 302 97 73 chr10 12492299 12492326 -133096962 - L1ME4a LINE L1 -812 5334 5309 2435 64 0 3 chr10 12492326 12492638 -133096650 - AluY SINE Alu 0 311 1 571 302 97 73 chr10 12492638 12492715 -133096573 - L1ME4a LINE L1 -837 5309 5235 1629 178 10 0 chr10 12492715 12493008 -133096280 - AluJb SINE Alu -13 299 4 571 302 97 73 chr10 12493008 12493223 -133096065 - L1ME4a LINE L1 -911 5235 4995 2033 128 7 0 chr10 12493223 12493521 -133095767 + AluSx SINE Alu 1 300 -12 571 302 97 73 chr10 12493521 12493703 -133095585 - L1ME4a LINE L1 -1151 4995 4819 2275 77 0 13 chr10 12493760 12494059 -133095229 - AluSg SINE Alu -15 295 1 2260 102 3 0 chr10 12494060 12494365 -133094923 - AluSp SINE Alu -7 306 1 1936 96 57 7 chr10 12494365 12494644 -133094644 - AluSc SINE Alu -15 294 1 2047 122 3 0 chr10 12494905 12495209 -133094079 - AluSx SINE Alu -7 305 1 673 278 82 11 chr10 12496047 12496328 -133092960 + HsTC2 DNA Tc2 4 304 -1594 506 196 116 32 chr10 12496310 12496499 -133092789 + HsTC2 DNA Tc2 1692 1896 -2 * 2258 74 0 7 chr10 12496597 12496895 -133092393 - AluSg SINE Alu -14 296 1 2371 81 0 0 chr10 12497121 12497430 -133091858 - AluSc SINE Alu 0 309 1 953 95 0 95 chr10 12497568 12497736 -133091552 - AluSp/q SINE Alu -4 309 158 1930 125 14 0 chr10 12497911 12498200 -133091088 - AluSx SINE Alu -19 293 1 1315 110 24 125 chr10 12498365 12498693 -133090595 + AluSg SINE Alu 1 295 -15 259 167 21 0 chr10 12499575 12499623 -133089665 - MER112 DNA MER1_type -108 152 104 339 209 70 85 chr10 12500956 12501085 -133088203 - L1ME LINE L1 -304 5817 5691 1199 116 0 0 chr10 12502950 12503122 -133086166 - AluSq SINE Alu -8 305 134 2211 91 3 3 chr10 12503122 12503420 -133085868 - AluSc SINE Alu -11 298 1 2096 116 3 0 chr10 12504068 12504369 -133084919 + AluSx SINE Alu 1 302 -10 1112 43 7 0 chr10 12504591 12504731 -133084557 - AluY SINE Alu -6 305 165 202 266 16 16 chr10 12504865 12504929 -133084359 + GA-rich Low_complexity Low_complexity 4 67 0 1678 118 23 59 chr10 12505177 12505483 -133083805 + AluSx SINE Alu 7 301 -11 982 157 0 0 chr10 12505483 12505636 -133083652 + AluSg/x SINE Alu 132 284 -26 234 0 0 0 chr10 12505636 12505662 -133083626 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 2242 93 0 3 chr10 12506024 12506326 -133082962 - AluSx SINE Alu -11 301 1 1274 39 0 0 chr10 12506384 12506540 -133082748 - AluY SINE Alu -13 298 143 1460 223 0 13 chr10 12506668 12506978 -133082310 + AluJo SINE Alu 1 306 -6 647 74 0 11 chr10 12506978 12507073 -133082215 + (GGAA)n Simple_repeat Simple_repeat 1 94 0 2231 111 0 0 chr10 12507462 12507769 -133081519 + AluSx SINE Alu 1 307 -5 2024 116 0 3 chr10 12508548 12508841 -133080447 + AluSx SINE Alu 1 292 -20 1393 171 22 67 chr10 12508942 12509257 -133080031 - AluJo SINE Alu -11 301 1 1620 180 0 3 chr10 12509308 12509603 -133079685 - AluJo SINE Alu -18 294 1 2022 107 21 0 chr10 12510446 12510727 -133078561 + AluSx SINE Alu 1 287 -25 724 83 10 0 chr10 12510812 12510908 -133078380 + AluY SINE Alu 2 98 -213 2119 111 10 0 chr10 12510914 12511221 -133078067 + AluY SINE Alu 1 310 -1 36 23 0 0 chr10 12511222 12511265 -133078023 + AT_rich Low_complexity Low_complexity 1 43 0 1372 111 5 0 chr10 12511265 12511454 -133077834 + AluSc SINE Alu 1 190 -119 31 0 0 0 chr10 12511463 12511494 -133077794 + AT_rich Low_complexity Low_complexity 1 31 0 1627 128 6 98 chr10 12511508 12511836 -133077452 - AluSx SINE Alu -14 298 1 1453 117 0 0 chr10 12512113 12512319 -133076969 - AluSg/x SINE Alu -20 290 85 2236 89 0 0 chr10 12512372 12512664 -133076624 - AluSp SINE Alu -21 292 1 37 23 0 0 chr10 12513084 12513128 -133076160 + AT_rich Low_complexity Low_complexity 1 44 0 2087 96 3 0 chr10 12513211 12513515 -133075773 + AluSx SINE Alu 1 305 0 2000 100 4 4 chr10 12513699 12513980 -133075308 - AluSq SINE Alu -32 281 1 1424 90 33 94 chr10 12514005 12514250 -133075038 - MER30 DNA MER1_type 0 230 1 2119 66 0 69 chr10 12514258 12514578 -133074710 - AluY SINE Alu -13 298 1 372 240 0 50 chr10 12514854 12514954 -133074334 + MLT1H1 LTR MaLR 461 555 0 283 288 224 0 chr10 12515113 12515262 -133074026 + MIR SINE MIR 30 208 -54 1774 158 7 10 chr10 12515285 12515589 -133073699 - AluJb SINE Alu -9 303 1 1429 150 33 48 chr10 12516063 12516137 -133073151 - AluJb SINE Alu -7 305 231 2094 54 98 4 chr10 12516137 12516414 -133072874 - AluY SINE Alu -8 303 1 1429 150 33 48 chr10 12516414 12516612 -133072676 - AluJb SINE Alu -81 231 37 2021 129 3 0 chr10 12516692 12517002 -133072286 - AluY SINE Alu 0 311 1 2132 81 0 62 chr10 12517113 12517434 -133071854 - AluY SINE Alu -10 301 1 239 364 108 0 chr10 12517517 12517693 -133071595 + L3 LINE CR1 509 703 -874 2220 96 3 3 chr10 12517742 12518045 -133071243 - AluSc SINE Alu -6 303 1 302 343 37 0 chr10 12518048 12518182 -133071106 + L2 LINE L2 1984 2122 -1192 854 188 30 6 chr10 12518182 12518347 -133070941 + FRAM SINE Alu 1 167 -9 1551 131 62 0 chr10 12518510 12518754 -133070534 + AluSx SINE Alu 43 301 -11 1157 127 6 0 chr10 12518804 12518977 -133070311 - AluSg/x SINE Alu -12 300 127 2133 126 0 0 chr10 12518981 12519290 -133069998 - AluSx SINE Alu -3 309 1 324 294 174 38 chr10 12519511 12519776 -133069512 + L2 LINE L2 210 510 -2804 1988 116 3 32 chr10 12519896 12520207 -133069081 + AluSq SINE Alu 1 302 -11 313 247 94 88 chr10 12520328 12520440 -133068848 + L1ME4a LINE L1 5927 6042 -79 757 128 0 108 chr10 12520440 12520477 -133068811 - FLAM_A SINE Alu -169 133 94 2197 85 7 0 chr10 12520477 12520770 -133068518 + AluY SINE Alu 1 295 -16 757 128 0 108 chr10 12520770 12520880 -133068408 - FLAM_A SINE Alu -208 94 2 313 247 94 88 chr10 12520880 12520937 -133068351 + L1ME4a LINE L1 6042 6097 -24 2019 71 3 27 chr10 12520947 12521244 -133068044 - AluY SINE Alu -21 290 1 1624 156 7 10 chr10 12521373 12521661 -133067627 + AluJo SINE Alu 1 287 -25 1538 157 0 30 chr10 12523129 12523428 -133065860 + AluJo SINE Alu 7 296 -16 2022 117 0 16 chr10 12523428 12523709 -133065579 + AluSc SINE Alu 1 285 -24 223 37 0 0 chr10 12523709 12523736 -133065552 + (TAAA)n Simple_repeat Simple_repeat 2 180 0 2022 117 0 16 chr10 12523736 12523761 -133065527 + AluSc SINE Alu 285 309 0 381 281 21 0 chr10 12523837 12523933 -133065355 + MER106A DNA MER1_type 2 99 -137 378 205 145 51 chr10 12524484 12524601 -133064687 - MER5B DNA MER1_type 0 178 51 1805 164 157 5 chr10 12524603 12525036 -133064252 - L1MB8 LINE L1 0 6178 5680 536 230 52 0 chr10 12525039 12525174 -133064114 - L1MB8 LINE L1 -588 5586 5445 565 135 58 19 chr10 12525174 12525278 -133064010 - AluJo/FRAM SINE Alu -70 242 135 2068 124 3 0 chr10 12525280 12525587 -133063701 - AluSg SINE Alu 0 310 3 327 233 12 23 chr10 12525588 12525674 -133063614 - L1MB8 LINE L1 -1184 4962 4878 277 115 77 19 chr10 12525798 12525850 -133063438 - MER5B DNA MER1_type -123 55 1 369 109 0 0 chr10 12527006 12527061 -133062227 + (TCC)n Simple_repeat Simple_repeat 2 56 0 186 313 0 45 chr10 12529835 12529902 -133059386 - L2 LINE L2 -6 3266 3203 2186 81 7 7 chr10 12529995 12530291 -133058997 - AluSc SINE Alu -13 296 1 2185 104 3 0 chr10 12530722 12531030 -133058258 - AluSx SINE Alu -3 309 1 745 182 46 36 chr10 12533117 12533375 -133055913 - L1MB4 LINE L1 -5 6175 5899 787 227 116 5 chr10 12533412 12533619 -133055669 - L1MB4 LINE L1 -390 5790 5561 2077 116 0 0 chr10 12533649 12533991 -133055297 - AluSx SINE Alu 0 343 2 638 106 163 32 chr10 12534249 12534372 -133054916 - FRAM SINE Alu -17 159 21 2027 74 35 18 chr10 12535186 12535470 -133053818 - AluSq SINE Alu -24 289 1 2174 92 0 7 chr10 12535839 12536133 -133053155 - AluSg1 SINE Alu -17 292 1 1942 129 0 35 chr10 12536233 12536544 -133052744 - AluSx SINE Alu -12 300 1 1992 109 3 3 chr10 12537005 12537320 -133051968 + AluSq SINE Alu 1 315 0 1651 164 14 7 chr10 12537331 12537618 -133051670 + AluJb SINE Alu 1 289 -23 520 163 16 10 chr10 12537622 12537868 -133051420 + AluJb SINE Alu 3 298 -14 314 91 0 26 chr10 12537894 12537955 -133051333 + AluSp SINE Alu 1 38 -264 1755 89 4 0 chr10 12537955 12538191 -133051097 + AluSp SINE Alu 71 307 -6 2100 124 0 0 chr10 12538291 12538590 -133050698 + AluSx SINE Alu 1 299 -13 2177 108 0 0 chr10 12538809 12539104 -133050184 + AluSx SINE Alu 1 295 -17 2294 84 0 0 chr10 12539207 12539516 -133049772 + AluY SINE Alu 1 309 -2 232 310 46 11 chr10 12542686 12542773 -133046515 + MIR3 SINE MIR 104 193 -15 1784 144 54 30 chr10 12543017 12543350 -133045938 - MER2 DNA MER2_type -3 341 1 475 146 49 0 chr10 12543352 12543434 -133045854 - Tigger4(Zombi) DNA MER2_type 0 2731 2646 * 1190 188 39 8 chr10 12543431 12543665 -133045623 - Tigger4(Zombi) DNA MER2_type -2288 443 203 934 132 0 0 chr10 12543665 12543801 -133045487 + AluJo SINE Alu 1 136 -176 1652 168 30 3 chr10 12543825 12544122 -133045166 + AluSx SINE Alu 1 305 -7 1064 191 44 10 chr10 12544123 12544327 -133044961 - Tigger4(Zombi) DNA MER2_type -2520 211 1 258 299 72 21 chr10 12544534 12544631 -133044657 + MER5A DNA MER1_type 67 168 -21 231 346 48 10 chr10 12544542 12544646 -133044642 - MER5B DNA MER1_type -64 114 7 * 2249 98 0 0 chr10 12544702 12545007 -133044281 - AluSx SINE Alu -7 305 1 410 252 83 54 chr10 12545813 12546012 -133043276 - L1ME4a LINE L1 -261 5860 5649 1941 107 16 44 chr10 12546012 12546331 -133042957 - AluSx SINE Alu -2 310 1 410 252 83 54 chr10 12546331 12546409 -133042879 - L1ME4a LINE L1 -472 5649 5575 317 238 0 111 chr10 12547199 12547325 -133041963 + L1ME3A LINE L1 5988 6099 -71 2162 104 10 0 chr10 12548590 12548898 -133040390 - AluSx SINE Alu -1 311 1 1554 176 0 21 chr10 12549014 12549304 -133039984 - AluJb SINE Alu -24 288 5 225 237 66 40 chr10 12549335 12549411 -133039877 - HAL1 LINE L1 -9 2498 2421 796 238 18 35 chr10 12549452 12549679 -133039609 - HAL1 LINE L1 -846 1661 1439 394 196 29 80 chr10 12549700 12549838 -133039450 - HAL1 LINE L1 -1140 1367 1237 1171 154 103 26 chr10 12549846 12550079 -133039209 + AluJb SINE Alu 1 251 -61 2011 89 0 35 chr10 12550415 12550728 -133038560 + AluSc SINE Alu 1 302 -7 482 287 63 30 chr10 12550742 12550979 -133038309 - L2 LINE L2 -87 3226 2982 2154 96 3 0 chr10 12551089 12551381 -133037907 - AluSq SINE Alu -20 293 1 2250 73 14 0 chr10 12551870 12552159 -133037129 - AluY SINE Alu -13 298 6 1571 114 0 0 chr10 12552582 12552801 -133036487 - AluSx SINE Alu -10 300 82 565 143 0 0 chr10 12552902 12552986 -133036302 - AluSx SINE Alu -227 85 2 2171 78 3 10 chr10 12553180 12553505 -133035783 + AluY SINE Alu 1 311 0 584 200 17 8 chr10 12553696 12553816 -133035472 + FLAM_A SINE Alu 14 134 -8 765 119 0 0 chr10 12554275 12554412 -133034876 + AluSc SINE Alu 174 310 0 24 53 0 0 chr10 12554610 12554648 -133034640 + AT_rich Low_complexity Low_complexity 1 38 0 1877 126 17 7 chr10 12554650 12554943 -133034345 + AluSx SINE Alu 1 296 -16 187 369 46 15 chr10 12555314 12555444 -133033844 - L2 LINE L2 -911 2403 2270 2082 66 13 33 chr10 12555948 12556253 -133033035 - AluSx SINE Alu -13 299 1 1957 105 14 3 chr10 12556958 12557253 -133032035 + AluSx SINE Alu 1 298 -14 919 175 113 16 chr10 12558755 12559012 -133030276 + L1MA8 LINE L1 6000 6281 -10 2311 58 0 7 chr10 12559460 12559755 -133029533 - AluY SINE Alu -18 293 1 342 129 0 48 chr10 12559802 12559864 -133029424 - Alu SINE Alu -11 290 232 34 24 0 0 chr10 12559864 12559905 -133029383 + AT_rich Low_complexity Low_complexity 1 41 0 720 224 213 12 chr10 12561406 12561660 -133027628 + L2 LINE L2 3008 3312 -1 2233 89 3 0 chr10 12561895 12562198 -133027090 - AluY SINE Alu -6 305 2 2094 128 3 0 chr10 12562199 12562504 -133026784 - AluSx SINE Alu -6 306 1 1830 139 13 3 chr10 12563126 12563429 -133025859 + AluSx SINE Alu 6 311 -1 1544 102 0 0 chr10 12563718 12563923 -133025365 - AluSc SINE Alu -104 205 1 1004 96 0 0 chr10 12563923 12564058 -133025230 - AluSq/x SINE Alu -178 135 1 1957 125 6 19 chr10 12564392 12564703 -133024585 - AluSq SINE Alu 0 313 7 1863 86 0 4 chr10 12564881 12565125 -133024163 - AluSq SINE Alu -57 256 14 339 315 21 55 chr10 12565157 12565198 -133024090 + HAL1 LINE L1 1526 1567 -940 1575 159 35 21 chr10 12565198 12565487 -133023801 - AluJo SINE Alu -19 293 1 339 315 21 55 chr10 12565487 12565683 -133023605 + HAL1 LINE L1 1567 1755 -752 2133 104 0 3 chr10 12565708 12565997 -133023291 + AluSx SINE Alu 1 288 -24 32 0 0 0 chr10 12565998 12566030 -133023258 + AT_rich Low_complexity Low_complexity 1 32 0 482 153 0 24 chr10 12567031 12567116 -133022172 - FLAM_C SINE Alu -3 140 58 2213 122 0 0 chr10 12567262 12567574 -133021714 + AluSx SINE Alu 1 312 0 208 265 0 0 chr10 12567734 12567783 -133021505 - L2 LINE L2 -3 3269 3221 2219 99 7 0 chr10 12568263 12568565 -133020723 + AluSg SINE Alu 1 304 -6 840 114 15 0 chr10 12568695 12568826 -133020462 - AluSc SINE Alu -2 307 175 439 321 78 5 chr10 12568826 12568908 -133020380 + L3 LINE CR1 1370 1445 -132 1924 143 0 3 chr10 12568908 12569216 -133020072 - AluSx SINE Alu -5 307 1 439 321 78 5 chr10 12569216 12569326 -133019962 + L3 LINE CR1 1445 1576 -1 1917 144 7 0 chr10 12569917 12570216 -133019072 + AluSx SINE Alu 1 301 -11 679 138 0 0 chr10 12570235 12570329 -133018959 + FLAM_C SINE Alu 25 118 -25 33 25 0 0 chr10 12570329 12570369 -133018919 + AT_rich Low_complexity Low_complexity 1 40 0 2189 102 7 0 chr10 12570384 12570689 -133018599 + AluSc SINE Alu 1 307 -2 2159 89 0 16 chr10 12570891 12571215 -133018073 - AluY SINE Alu 0 319 1 371 269 0 0 chr10 12571219 12571297 -133017991 - AluYb8 SINE Alu -11 297 220 2199 101 7 0 chr10 12571424 12571720 -133017568 + AluSg SINE Alu 13 310 0 1944 141 0 3 chr10 12571940 12572237 -133017051 + AluJo SINE Alu 1 296 -16 307 217 90 107 chr10 12572431 12572639 -133016649 - L1ME4a LINE L1 -50 6071 5861 2168 102 7 0 chr10 12572639 12572943 -133016345 - AluSg SINE Alu 0 310 5 2241 95 3 0 chr10 12572946 12573250 -133016038 - AluSp SINE Alu -8 305 1 307 217 90 107 chr10 12573250 12573281 -133016007 - L1ME4a LINE L1 -262 5859 5829 2212 92 0 3 chr10 12573281 12573575 -133015713 - AluSc SINE Alu -16 293 1 307 217 90 107 chr10 12573575 12573629 -133015659 - L1ME4a LINE L1 -292 5829 5778 333 0 0 0 chr10 12573631 12573668 -133015620 + (TG)n Simple_repeat Simple_repeat 2 38 0 2375 100 3 0 chr10 12574286 12574595 -133014693 - AluSp SINE Alu 0 313 4 306 258 50 88 chr10 12574685 12574831 -133014457 + MER5A DNA MER1_type 8 147 -42 2362 93 0 0 chr10 12574831 12575142 -133014146 - L1PA7 LINE L1 -2 6152 5842 306 258 50 88 chr10 12575142 12575177 -133014111 + MER5A DNA MER1_type 147 182 -7 222 62 0 0 chr10 12575226 12575258 -133014030 + (TTG)n Simple_repeat Simple_repeat 2 33 0 1851 131 0 54 chr10 12575261 12575558 -133013730 - AluSx SINE Alu -31 281 1 2189 115 23 3 chr10 12575839 12576143 -133013145 - AluSg SINE Alu 0 310 1 422 217 12 0 chr10 12576291 12576374 -133012914 - L1ME4a LINE L1 -414 5707 5624 302 61 20 0 chr10 12576936 12576985 -133012303 + (TG)n Simple_repeat Simple_repeat 2 51 0 495 120 0 27 chr10 12576989 12577064 -133012224 - FLAM_A SINE Alu -25 117 45 2185 91 7 17 chr10 12577295 12577592 -133011696 - AluSg SINE Alu -16 294 1 1055 126 0 0 chr10 12577592 12577735 -133011553 - AluSg SINE Alu -167 143 1 235 223 91 66 chr10 12578233 12578354 -133010934 - L1ME4a LINE L1 -1276 4870 4747 1861 148 13 33 chr10 12578414 12578717 -133010571 - AluSx SINE Alu -15 297 1 2101 97 43 0 chr10 12578737 12579016 -133010272 - AluSc SINE Alu -18 291 1 2319 111 7 0 chr10 12579335 12579641 -133009647 - AluSg SINE Alu -2 308 1 1250 183 85 100 chr10 12580047 12580175 -133009113 - Looper DNA T2_type -178 1380 1252 2303 111 0 3 chr10 12580175 12580481 -133008807 - AluSx SINE Alu -7 305 1 1250 183 85 100 chr10 12580481 12580800 -133008488 - Looper DNA T2_type -306 1252 940 1910 75 95 0 chr10 12581119 12581372 -133007916 - AluY SINE Alu -13 298 22 342 0 0 0 chr10 12581613 12581651 -133007637 + (CA)n Simple_repeat Simple_repeat 2 39 0 23 33 0 0 chr10 12581923 12581953 -133007335 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr10 12582208 12582236 -133007052 + AT_rich Low_complexity Low_complexity 1 28 0 291 71 0 0 chr10 12582402 12582444 -133006844 + (TTTTA)n Simple_repeat Simple_repeat 2 43 0 1388 144 52 19 chr10 12582446 12582717 -133006571 - AluY SINE Alu -31 280 1 714 173 8 15 chr10 12582719 12582852 -133006436 - AluJo/FLAM SINE Alu -169 133 2 21 0 0 0 chr10 12583084 12583105 -133006183 + AT_rich Low_complexity Low_complexity 1 21 0 530 305 108 41 chr10 12583425 12584057 -133005231 - L2 LINE L2 -213 3059 2374 591 250 54 0 chr10 12584146 12584294 -133004994 - L1ME2 LINE L1 -3 6161 6006 372 188 0 0 chr10 12584295 12584364 -133004924 - L1ME2 LINE L1 -209 5955 5887 2717 171 52 15 chr10 12584372 12584756 -133004532 - MER21B LTR ERV1 -1 862 453 2228 125 0 0 chr10 12584756 12585061 -133004227 + AluSx SINE Alu 3 307 -5 2717 171 52 15 chr10 12585061 12585198 -133004090 - MER21B LTR ERV1 -410 453 322 234 156 0 0 chr10 12585338 12585383 -133003905 + L2 LINE L2 3269 3313 0 497 264 32 7 chr10 12585446 12585601 -133003687 + MER117 DNA MER1_type 1 159 -38 1933 145 7 3 chr10 12585835 12586132 -133003156 + AluJo SINE Alu 3 300 -12 251 118 0 0 chr10 12586352 12586386 -133002902 + Tigger4(Zombi) DNA MER2_type 4 37 -2694 * 910 98 286 98 chr10 12586384 12586509 -133002779 + Tigger4(Zombi) DNA MER2_type 2452 2552 -179 3893 89 47 15 chr10 12586509 12586731 -133002557 - L1MA1 LINE L1 0 6302 6089 2293 112 0 3 chr10 12586731 12587036 -133002252 + AluSx SINE Alu 1 304 -8 3893 89 47 15 chr10 12587036 12587408 -133001880 - L1MA1 LINE L1 -213 6089 5689 910 98 286 98 chr10 12587408 12587516 -133001772 + Tigger4(Zombi) DNA MER2_type 2552 2729 -2 461 119 525 0 chr10 12587751 12587852 -133001436 - AluSc SINE Alu -154 155 2 271 175 18 35 chr10 12587970 12588027 -133001261 - LTR67 LTR ERVL -3 554 499 2399 98 0 0 chr10 12588200 12588496 -133000792 + AluSq SINE Alu 1 296 -17 1623 175 0 11 chr10 12588509 12588777 -133000511 - AluJo SINE Alu -45 267 3 2573 65 0 0 chr10 12589146 12589453 -132999835 - AluY SINE Alu -4 307 1 207 100 0 0 chr10 12589461 12589491 -132999797 + (T)n Simple_repeat Simple_repeat 1 30 0 804 101 18 0 chr10 12589531 12589640 -132999648 - FLAM_C SINE Alu -32 111 1 337 245 22 136 chr10 12589640 12589743 -132999545 + MER5B DNA MER1_type 15 128 -50 2141 112 0 32 chr10 12589743 12590056 -132999232 - AluSq SINE Alu 0 313 11 337 245 22 136 chr10 12590056 12590071 -132999217 + MER5B DNA MER1_type 128 143 -35 2278 115 0 3 chr10 12590071 12590384 -132998904 - AluSp SINE Alu -1 312 1 337 245 22 136 chr10 12590384 12590448 -132998840 + MER5B DNA MER1_type 143 177 -1 1868 157 15 68 chr10 12590773 12591167 -132998121 + MLT1B LTR MaLR 18 390 0 2114 136 3 3 chr10 12591419 12591728 -132997560 - AluSx SINE Alu -3 309 1 388 191 15 0 chr10 12591952 12592020 -132997268 + MLT1E LTR MaLR 55 123 -470 576 89 0 0 chr10 12592040 12592119 -132997169 - AluJ/FLAM SINE Alu -232 80 2 926 153 0 20 chr10 12592222 12592372 -132996916 - AluSg/x SINE Alu -8 304 158 328 234 154 53 chr10 12592796 12592984 -132996304 - L1M4 LINE L1 -748 5398 5192 2479 88 0 0 chr10 12593237 12593545 -132995743 + AluSc SINE Alu 1 308 -1 3870 90 41 0 chr10 12594062 12594594 -132994694 + MER41A LTR ERV1 1 554 0 1309 91 0 0 chr10 12594683 12594858 -132994430 - AluSg/x SINE Alu 0 312 138 2451 74 3 0 chr10 12595432 12595731 -132993557 + AluSq SINE Alu 1 300 -13 1632 145 17 3 chr10 12595734 12596023 -132993265 + L1PA16 LINE L1 5865 6157 -9 23 33 0 0 chr10 12596200 12596230 -132993058 + AT_rich Low_complexity Low_complexity 1 30 0 1977 159 3 0 chr10 12596242 12596538 -132992750 + AluSx SINE Alu 4 300 -12 2595 51 0 0 chr10 12597410 12597704 -132991584 + AluY SINE Alu 2 295 -16 236 197 14 28 chr10 12597738 12597809 -132991479 + (TATAA)n Simple_repeat Simple_repeat 1 70 0 750 309 87 40 chr10 12597897 12598298 -132990990 - MLT1L LTR MaLR -48 567 148 645 124 58 33 chr10 12598298 12598419 -132990869 - MER30B DNA MER1_type 0 230 107 40 21 0 0 chr10 12598425 12598472 -132990816 + AT_rich Low_complexity Low_complexity 1 47 0 809 94 15 9 chr10 12598472 12598624 -132990664 - MER30B DNA MER1_type -75 155 1 531 256 67 0 chr10 12598634 12598798 -132990490 - MER5A DNA MER1_type -4 185 11 1183 38 0 0 chr10 12599051 12599182 -132990106 + AluSg SINE Alu 1 131 -179 568 147 0 42 chr10 12599465 12599560 -132989728 - AluSg/x SINE Alu -14 295 205 2462 64 0 10 chr10 12599609 12599907 -132989381 - AluY SINE Alu -16 295 1 2293 120 0 0 chr10 12599991 12600299 -132988989 - AluSx SINE Alu -4 308 1 2468 87 6 0 chr10 12600582 12600915 -132988373 - L1PB1 LINE L1 0 6151 5817 200 108 0 27 chr10 12600990 12601027 -132988261 + (TTTTC)n Simple_repeat Simple_repeat 5 40 0 207 0 0 0 chr10 12601498 12601521 -132987767 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 2295 108 3 16 chr10 12601826 12602141 -132987147 + AluSx SINE Alu 1 311 -1 4391 98 62 7 chr10 12602470 12603083 -132986205 - SVA Other Other 0 1386 740 1986 147 0 16 chr10 12603329 12603635 -132985653 + AluJb SINE Alu 1 301 -11 1911 117 78 0 chr10 12603856 12604139 -132985149 - AluSx SINE Alu -7 305 1 282 56 0 0 chr10 12604221 12604257 -132985031 + (A)n Simple_repeat Simple_repeat 1 36 0 2309 91 14 0 chr10 12605083 12605379 -132983909 - AluY SINE Alu -11 300 1 1909 141 35 0 chr10 12605479 12605769 -132983519 - AluSq SINE Alu -13 300 1 2264 109 0 0 chr10 12605933 12606226 -132983062 - AluSx SINE Alu -19 293 1 184 246 0 35 chr10 12606363 12606420 -132982868 - L2 LINE L2 -35 3237 3183 265 280 56 19 chr10 12606854 12606961 -132982327 + L1MEd LINE L1 96 206 -5913 944 277 106 28 chr10 12607636 12608033 -132981255 + L1MC4 LINE L1 5313 5740 -2068 1387 131 36 18 chr10 12608061 12608283 -132981005 - AluJb SINE Alu -75 237 12 2667 40 0 0 chr10 12608859 12609159 -132980129 - AluY SINE Alu -11 300 1 2108 102 24 14 chr10 12609161 12609455 -132979833 - AluSp SINE Alu -16 297 1 1644 168 0 38 chr10 12609731 12609879 -132979409 - AluJb SINE Alu -30 282 149 1640 123 119 15 chr10 12609879 12610148 -132979140 - AluSg SINE Alu -13 297 1 1644 168 0 38 chr10 12610148 12610290 -132978998 - AluJb SINE Alu -163 149 3 1634 96 9 14 chr10 12610844 12611062 -132978226 - AluSq SINE Alu -96 217 1 1041 137 0 0 chr10 12611492 12611638 -132977650 + AluSq/x SINE Alu 1 146 -167 2345 93 0 3 chr10 12611639 12611940 -132977348 + AluY SINE Alu 1 300 -11 1358 278 143 36 chr10 12611978 12612911 -132976377 - HAL1 LINE L1 -1124 1383 352 3026 136 2 2 chr10 12613343 12613791 -132975497 - MER83 LTR ERV1 0 448 1 1749 192 7 0 chr10 12614195 12614497 -132974791 - AluJo SINE Alu -8 304 1 1760 181 3 13 chr10 12614517 12614826 -132974462 - AluJb SINE Alu -6 306 1 2081 116 0 3 chr10 12615673 12615965 -132973323 - AluSx SINE Alu -21 291 1 1295 205 137 36 chr10 12616749 12616790 -132972498 + L1MC4 LINE L1 6584 6619 -1423 1831 114 84 4 chr10 12616790 12617076 -132972212 + AluSx SINE Alu 1 307 0 1295 205 137 36 chr10 12617076 12617419 -132971869 + L1MC4 LINE L1 6619 7008 -1034 1531 138 120 57 chr10 12617420 12617477 -132971811 + MER46B DNA MER2_type 2 54 -2677 585 236 0 16 chr10 12617477 12617600 -132971688 - FLAM_A SINE Alu -12 121 1 1531 138 120 57 chr10 12617600 12617875 -132971413 + MER46B DNA MER2_type 54 230 -6 2503 228 90 38 chr10 12617885 12618621 -132970667 + L1MC4 LINE L1 7012 7785 -257 1419 192 78 39 chr10 12618621 12619007 -132970281 - LTR37A LTR ERV1 -8 418 18 182 174 22 0 chr10 12621411 12621457 -132967831 + T-rich Low_complexity Low_complexity 1 47 0 304 213 52 81 chr10 12621473 12621609 -132967679 - HAL1 LINE L1 -20 2487 2356 2309 82 0 13 chr10 12622768 12623073 -132966215 + AluSx SINE Alu 1 301 -11 9837 57 7 109 chr10 12623581 12625096 -132964192 - SVA Other Other 0 1386 26 231 36 0 0 chr10 12625101 12625129 -132964159 + (AGGGGG)n Simple_repeat Simple_repeat 2 29 0 2288 127 0 0 chr10 12625313 12625620 -132963668 - AluSg SINE Alu -3 307 1 21 36 0 0 chr10 12625729 12625757 -132963531 + AT_rich Low_complexity Low_complexity 1 28 0 1687 176 32 0 chr10 12625780 12626058 -132963230 - AluJo SINE Alu -25 287 1 27 0 0 0 chr10 12626092 12626119 -132963169 + AT_rich Low_complexity Low_complexity 1 27 0 2046 134 0 47 chr10 12626224 12626399 -132962889 - AluSx SINE Alu -6 306 151 2411 88 3 0 chr10 12626399 12626694 -132962594 - AluSp SINE Alu -17 296 1 2046 134 0 47 chr10 12626694 12626839 -132962449 - AluSx SINE Alu -161 151 1 263 237 101 93 chr10 12627461 12627600 -132961688 + L2 LINE L2 3169 3308 -5 201 314 58 22 chr10 12627579 12627716 -132961572 + L3 LINE CR1 1175 1316 -261 * 1257 110 12 110 chr10 12627949 12628006 -132961282 - L1MA2 LINE L1 0 6304 6243 2198 114 0 10 chr10 12628006 12628313 -132960975 - AluSx SINE Alu -4 308 5 1257 110 12 110 chr10 12628313 12628510 -132960778 - L1MA2 LINE L1 -61 6243 6075 266 286 33 11 chr10 12628547 12628638 -132960650 + MIR SINE MIR 163 255 -7 1915 172 0 0 chr10 12629851 12630147 -132959141 + AluJo SINE Alu 1 296 -16 1976 112 22 14 chr10 12630147 12630459 -132958829 + AluSg SINE Alu 1 314 0 220 293 81 64 chr10 12632270 12632553 -132956735 + L2 LINE L2 1522 1809 -1505 1961 68 8 16 chr10 12632573 12632822 -132956466 + AluY SINE Alu 47 293 -18 2383 78 0 14 chr10 12633034 12633330 -132955958 + AluSx SINE Alu 1 292 -20 2331 99 3 0 chr10 12633332 12633625 -132955663 + AluSp SINE Alu 1 294 -19 1798 91 4 9 chr10 12633636 12633867 -132955421 + AluSx SINE Alu 1 230 -82 2136 116 10 10 chr10 12634262 12634573 -132954715 - AluSx SINE Alu -1 311 1 1245 149 26 5 chr10 12634575 12634769 -132954519 - AluJb SINE Alu -21 291 94 211 305 0 0 chr10 12634816 12634875 -132954413 - MIR SINE MIR -13 249 191 790 166 0 43 chr10 12635000 12635139 -132954149 - FLAM_C SINE Alu 0 133 1 2051 139 3 0 chr10 12635162 12635464 -132953824 - AluSp SINE Alu -10 303 1 2260 100 3 0 chr10 12635614 12635914 -132953374 + AluSx SINE Alu 1 301 -11 2125 121 3 47 chr10 12636507 12636829 -132952459 - AluSg SINE Alu 0 310 3 180 0 0 0 chr10 12636838 12636858 -132952430 + (T)n Simple_repeat Simple_repeat 1 20 0 2323 85 7 3 chr10 12637209 12637502 -132951786 - AluSc SINE Alu -15 294 1 342 201 262 17 chr10 12637593 12637732 -132951556 + MIR SINE MIR 2 165 -43 919 162 0 0 chr10 12637848 12637990 -132951298 + FLAM_C SINE Alu 1 142 -1 31 44 0 0 chr10 12637990 12638035 -132951253 + AT_rich Low_complexity Low_complexity 1 45 0 1929 122 37 0 chr10 12638043 12638314 -132950974 + AluSx SINE Alu 18 298 -14 2206 120 0 3 chr10 12638316 12638608 -132950680 + AluSg SINE Alu 2 292 -18 5734 79 59 29 chr10 12638733 12639535 -132949753 + LTR12 LTR ERV1 1 826 0 727 256 49 25 chr10 12640001 12640204 -132949084 + MIR SINE MIR 42 249 -13 1613 195 48 0 chr10 12640210 12640502 -132948786 - AluJo SINE Alu -6 306 1 202 269 124 69 chr10 12640659 12640804 -132948484 - MIR SINE MIR -12 250 98 1543 166 0 91 chr10 12640912 12641219 -132948069 + AluJo SINE Alu 32 310 -2 2371 92 3 3 chr10 12641322 12641627 -132947661 - AluSc SINE Alu -4 305 1 284 109 0 22 chr10 12641973 12642019 -132947269 + Alu SINE Alu 1 45 -256 2336 102 0 3 chr10 12642166 12642471 -132946817 - AluSx SINE Alu -8 304 1 2306 93 0 0 chr10 12642483 12642772 -132946516 - AluSc SINE Alu -20 289 1 2003 117 0 8 chr10 12643304 12643570 -132945718 - AluSx SINE Alu -46 266 3 956 140 86 91 chr10 12643579 12643800 -132945488 - AluJo SINE Alu 0 312 93 1967 142 20 0 chr10 12643967 12644262 -132945026 - AluSx SINE Alu -11 301 1 665 188 0 55 chr10 12644276 12644442 -132944846 + FLAM_A SINE Alu 1 159 0 1235 228 58 41 chr10 12644513 12644866 -132944422 - L1ME LINE L1 -393 5771 5409 2282 114 0 3 chr10 12644866 12645165 -132944123 - AluSg SINE Alu -12 298 1 1235 228 58 41 chr10 12645165 12645224 -132944064 - L1ME LINE L1 -755 5409 5352 363 315 36 15 chr10 12645252 12645406 -132943882 - MIR SINE MIR -61 147 30 5067 111 18 45 chr10 12645634 12646079 -132943209 - L1PB1 LINE L1 0 6151 5695 2122 141 0 3 chr10 12646079 12646377 -132942911 - AluSx SINE Alu -15 297 1 5067 111 18 45 chr10 12646377 12646762 -132942526 - L1PB1 LINE L1 -456 5695 5301 10923 31 3 0 chr10 12646762 12648811 -132940477 - L1PA4 LINE L1 0 6155 4097 2384 68 0 35 chr10 12648814 12649125 -132940163 - AluY SINE Alu -9 302 3 5067 111 18 45 chr10 12649125 12649287 -132940001 - L1PB1 LINE L1 -852 5299 5236 2025 129 3 39 chr10 12649290 12649600 -132939688 - AluY SINE Alu -12 299 1 2286 86 0 63 chr10 12650131 12650446 -132938842 + AluSp SINE Alu 1 295 -18 2375 69 14 3 chr10 12650828 12651119 -132938169 + AluY SINE Alu 1 294 -17 2233 63 13 53 chr10 12651447 12651749 -132937539 + AluSg1 SINE Alu 1 290 -19 2317 94 7 0 chr10 12652125 12652411 -132936877 + AluSg SINE Alu 13 300 -10 2014 152 0 3 chr10 12652625 12652922 -132936366 + AluJb SINE Alu 1 296 -16 283 211 86 69 chr10 12653116 12653291 -132935997 - L1ME4a LINE L1 -50 6071 5894 2299 111 7 0 chr10 12653323 12653630 -132935658 - AluSg SINE Alu -1 309 1 2392 95 3 0 chr10 12653630 12653933 -132935355 - AluSp SINE Alu -8 305 1 2507 71 0 0 chr10 12653964 12654259 -132935029 - AluY SINE Alu -16 295 1 1260 89 6 0 chr10 12654889 12655047 -132934241 + AluSq SINE Alu 1 159 -154 2177 141 0 0 chr10 12655185 12655484 -132933804 - AluSx SINE Alu -13 299 1 1281 129 14 29 chr10 12655620 12655829 -132933459 + AluJo SINE Alu 87 292 -20 2221 97 21 0 chr10 12656059 12656348 -132932940 - AluSx SINE Alu -17 295 1 329 231 88 0 chr10 12656384 12656475 -132932813 - MER63 DNA MER1_type -86 750 26 1475 192 118 51 chr10 12656485 12656761 -132932527 - LOR1b LTR ERV1 0 461 205 2391 78 0 0 chr10 12656761 12657054 -132932234 - AluSc SINE Alu -16 293 1 2217 112 10 0 chr10 12657061 12657364 -132931924 - AluY SINE Alu -4 307 2 1475 192 118 51 chr10 12657364 12657511 -132931777 - LOR1b LTR ERV1 -261 200 1 1884 154 26 10 chr10 12657778 12658084 -132931204 + AluSx SINE Alu 1 311 -1 2120 142 0 19 chr10 12658655 12658971 -132930317 + AluSx SINE Alu 1 310 -2 799 158 0 50 chr10 12659005 12659144 -132930144 - FLAM_C SINE Alu -1 132 1 406 192 159 110 chr10 12659161 12659283 -132930005 + L1ME4a LINE L1 5635 5750 -371 1562 190 10 20 chr10 12659283 12659588 -132929700 + AluJo SINE Alu 1 302 -10 351 0 0 0 chr10 12659596 12659635 -132929653 + (CA)n Simple_repeat Simple_repeat 2 40 0 406 192 159 110 chr10 12659635 12659685 -132929603 + L1ME4a LINE L1 5756 5825 -296 2283 120 10 0 chr10 12659691 12660000 -132929288 + AluSx SINE Alu 1 312 0 471 214 5 176 chr10 12660185 12660266 -132929022 - MER45A DNA AcHobo -1405 176 151 1443 184 69 25 chr10 12660266 12660543 -132928745 + AluJo SINE Alu 1 289 -23 471 214 5 176 chr10 12660543 12660671 -132928617 - MER45A DNA AcHobo -1430 151 3 687 137 0 0 chr10 12661682 12661784 -132927504 - AluSx SINE Alu -20 290 189 904 147 15 0 chr10 12661786 12661922 -132927366 - AluSx SINE Alu -175 138 1 2752 27 0 0 chr10 12662093 12662393 -132926895 + AluY SINE Alu 1 300 -11 2113 110 27 3 chr10 12662641 12662933 -132926355 - AluSx SINE Alu -13 299 1 1662 166 14 20 chr10 12663262 12663557 -132925731 - AluJo SINE Alu -5 307 15 2259 92 0 32 chr10 12663835 12664150 -132925138 + AluY SINE Alu 1 305 -6 2000 114 52 0 chr10 12664160 12664449 -132924839 + AluSx SINE Alu 1 304 -8 2006 152 3 3 chr10 12665086 12665383 -132923905 - AluJo SINE Alu -15 297 1 325 263 60 88 chr10 12665459 12665676 -132923612 + MIR SINE MIR 52 262 0 2153 130 35 46 chr10 12665678 12665972 -132923316 + THE1B LTR MaLR 1 292 -72 2298 98 0 13 chr10 12665972 12666277 -132923011 - AluSc SINE Alu -8 301 1 2153 130 35 46 chr10 12666277 12666350 -132922938 + THE1B LTR MaLR 292 364 0 2045 152 0 7 chr10 12666464 12666761 -132922527 + AluSx SINE Alu 1 295 -17 403 129 0 0 chr10 12667204 12667274 -132922014 - AluSp/q SINE Alu -9 304 235 2147 113 0 13 chr10 12667543 12667852 -132921436 + AluSp SINE Alu 1 305 -8 1299 114 0 22 chr10 12667853 12668037 -132921251 + AluSg/x SINE Alu 131 310 0 1007 191 6 0 chr10 12668131 12668309 -132920979 - AluJb SINE Alu 0 312 134 1850 166 7 7 chr10 12668310 12668611 -132920677 - AluSx SINE Alu -11 301 1 1948 156 0 0 chr10 12668617 12668899 -132920389 - AluSq SINE Alu -31 282 1 2381 95 3 3 chr10 12669070 12669374 -132919914 - AluSx SINE Alu 0 312 9 1484 177 0 0 chr10 12669375 12669601 -132919687 - AluJb SINE Alu -73 239 14 23 0 0 0 chr10 12669616 12669639 -132919649 + AT_rich Low_complexity Low_complexity 1 23 0 2164 110 10 0 chr10 12669924 12670224 -132919064 - AluSq SINE Alu -10 303 1 1105 68 0 0 chr10 12670225 12670358 -132918930 - AluY SINE Alu -178 133 1 2133 138 0 0 chr10 12670358 12670655 -132918633 - AluSx SINE Alu -15 297 1 180 97 0 0 chr10 12670655 12670686 -132918602 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 1683 136 0 0 chr10 12670686 12670928 -132918360 - AluSx SINE Alu -29 283 42 827 141 67 0 chr10 12670929 12671078 -132918210 + MER2 DNA MER2_type 122 280 -65 2225 115 7 0 chr10 12671080 12671375 -132917913 - AluSx SINE Alu -9 303 7 323 385 0 0 chr10 12671927 12672036 -132917252 - L2 LINE L2 0 3313 3205 838 188 0 0 chr10 12672195 12672339 -132916949 - AluSg/x SINE Alu -10 302 159 634 228 0 0 chr10 12672471 12672594 -132916694 + FLAM_A SINE Alu 5 127 -6 187 167 21 42 chr10 12672615 12672663 -132916625 + L2 LINE L2 3041 3087 -226 2368 105 0 10 chr10 12672895 12673208 -132916080 + AluSx SINE Alu 3 312 0 2325 73 0 38 chr10 12673577 12673890 -132915398 + AluY SINE Alu 1 301 -10 2341 114 0 0 chr10 12673892 12674200 -132915088 + AluSx SINE Alu 1 308 -4 1941 133 12 62 chr10 12675298 12675622 -132913666 - AluJb SINE Alu -4 308 1 1254 184 92 26 chr10 12676317 12676589 -132912699 - AluSg SINE Alu -10 290 1 1254 128 0 20 chr10 12676931 12677126 -132912162 - AluSx SINE Alu -121 191 1 1802 143 0 23 chr10 12679751 12680059 -132909229 + AluSx SINE Alu 1 301 -11 817 175 0 7 chr10 12680258 12680401 -132908887 - L1PA15 LINE L1 0 6165 6024 1190 178 0 0 chr10 12680408 12680621 -132908667 - AluSg/x SINE Alu -15 297 85 300 135 54 68 chr10 12680748 12680822 -132908466 + L1MCa LINE L1 1992 2064 -4362 * 311 122 54 68 chr10 12680792 12680866 -132908422 + L1MCa LINE L1 1992 2064 -4362 28 0 0 0 chr10 12680866 12680894 -132908394 + AT_rich Low_complexity Low_complexity 1 28 0 473 269 70 75 chr10 12681002 12681333 -132907955 - L2 LINE L2 -24 3248 2920 1092 115 0 0 chr10 12681460 12681616 -132907672 - AluSx SINE Alu -32 278 123 951 114 0 0 chr10 12681655 12681787 -132907501 - AluSx SINE Alu -181 132 1 1497 161 8 0 chr10 12681791 12682039 -132907249 - AluJb SINE Alu -24 288 39 245 325 158 5 chr10 12682842 12683051 -132906237 + MIR SINE MIR 9 249 -13 27 0 0 0 chr10 12683259 12683286 -132906002 + AT_rich Low_complexity Low_complexity 1 27 0 210 167 0 0 chr10 12683528 12683564 -132905724 + A-rich Low_complexity Low_complexity 1 36 0 567 109 0 40 chr10 12683575 12683676 -132905612 - AluSp/q SINE Alu -2 311 215 353 194 30 0 chr10 12683778 12683845 -132905443 + Tigger5 DNA MER2_type 26 94 -2229 2034 129 0 6 chr10 12683845 12684156 -132905132 + AluY SINE Alu 1 309 -2 1967 206 55 122 chr10 12684204 12684573 -132904715 - L1ME1 LINE L1 -11 6155 5763 1925 137 6 10 chr10 12684573 12684886 -132904402 - AluSx SINE Alu 0 312 1 1967 206 55 122 chr10 12684886 12684900 -132904388 - L1ME1 LINE L1 -403 5763 5750 659 188 0 53 chr10 12684900 12685075 -132904213 + FLAM_A SINE Alu 1 168 0 1967 206 55 122 chr10 12685075 12685499 -132903789 - L1ME1 LINE L1 -416 5750 5398 2052 125 0 3 chr10 12685499 12685796 -132903492 - AluSx SINE Alu -12 300 5 1488 183 18 7 chr10 12685807 12686086 -132903202 + Tigger3(Golem) DNA MER2_type 2747 3028 -1 671 233 10 68 chr10 12686089 12686295 -132902993 - MIR SINE MIR -56 206 13 361 157 14 0 chr10 12686443 12686513 -132902775 - AluS SINE Alu -229 71 1 752 253 66 72 chr10 12686513 12687050 -132902238 - L1MEd LINE L1 -4823 1306 773 1973 142 3 0 chr10 12687098 12687407 -132901881 - AluSx SINE Alu -2 310 1 1883 126 28 0 chr10 12687761 12688047 -132901241 - AluSg SINE Alu -16 294 1 1274 189 8 12 chr10 12688913 12689172 -132900116 - L1MB3 LINE L1 -15 6168 5911 754 180 0 29 chr10 12689178 12689317 -132899971 + MER2 DNA MER2_type 1 135 -210 2276 68 0 40 chr10 12689317 12689641 -132899647 - AluY SINE Alu 0 311 1 3051 121 20 82 chr10 12689661 12690223 -132899065 + MER1A DNA MER1_type 1 527 0 1962 130 0 13 chr10 12690878 12691178 -132898110 - AluSx SINE Alu -16 296 1 346 93 0 0 chr10 12691488 12691531 -132897757 - AluJo SINE Alu -13 287 245 285 218 16 65 chr10 12691662 12691786 -132897502 + (CCCA)n Simple_repeat Simple_repeat 1 118 0 1376 187 11 26 chr10 12691948 12692221 -132897067 - AluJo SINE Alu -43 269 1 1972 114 13 35 chr10 12692221 12692538 -132896750 - AluSq SINE Alu -3 310 1 270 176 0 0 chr10 12692747 12692798 -132896490 + CT-rich Low_complexity Low_complexity 2 52 0 180 0 0 0 chr10 12692834 12692854 -132896434 + (T)n Simple_repeat Simple_repeat 1 20 0 1078 119 0 0 chr10 12693388 12693548 -132895740 - AluSc SINE Alu -18 291 132 1553 113 0 4 chr10 12693548 12693712 -132895576 - AluSc SINE Alu -11 298 134 2053 101 3 29 chr10 12693712 12694019 -132895269 - AluY SINE Alu -12 299 1 1553 113 0 4 chr10 12694019 12694085 -132895203 - AluSc SINE Alu -175 134 69 1480 176 43 0 chr10 12694218 12694497 -132894791 - L1MA8 LINE L1 -37 6254 5964 741 186 43 6 chr10 12694501 12694592 -132894696 - Looper DNA T2_type -120 1438 1337 182 37 37 0 chr10 12694592 12694619 -132894669 + (CA)n Simple_repeat Simple_repeat 2 29 0 741 186 43 6 chr10 12694619 12694688 -132894600 - Looper DNA T2_type -221 1337 1272 2349 79 0 0 chr10 12694690 12694993 -132894295 - AluY SINE Alu -8 303 1 196 320 13 13 chr10 12695184 12695259 -132894029 - MIR SINE MIR -140 122 48 1719 235 95 77 chr10 12695523 12696290 -132892998 - MER21B LTR ERV1 -71 792 12 38 18 0 18 chr10 12696703 12696729 -132892559 + AT_rich Low_complexity Low_complexity 1 26 -29 1018 127 51 19 chr10 12696729 12696887 -132892401 - FRAM SINE Alu 0 166 4 38 18 0 18 chr10 12696887 12696916 -132892372 + AT_rich Low_complexity Low_complexity 26 55 0 1190 214 71 0 chr10 12696935 12697187 -132892101 - MER21B LTR ERV1 -593 270 1 709 131 0 9 chr10 12697296 12697403 -132891885 + AluSq/x SINE Alu 2 107 -206 2229 109 0 6 chr10 12697775 12698088 -132891200 + AluSx SINE Alu 1 311 -1 477 253 81 93 chr10 12698231 12698311 -132890977 - MER102b DNA MER1_type -1088 340 261 480 274 79 0 chr10 12698311 12698475 -132890813 + MER69A DNA AcHobo 1 177 0 477 253 81 93 chr10 12698475 12698642 -132890646 - MER102b DNA MER1_type -1167 261 96 2125 120 3 0 chr10 12698642 12698941 -132890347 + AluSx SINE Alu 1 300 -12 477 253 81 93 chr10 12698941 12699036 -132890252 - MER102b DNA MER1_type -1332 96 1 2240 76 21 0 chr10 12699904 12700194 -132889094 - AluSx SINE Alu -16 296 1 326 281 70 83 chr10 12701472 12701700 -132887588 + L2 LINE L2 3047 3271 -1 481 222 44 37 chr10 12701775 12701910 -132887378 + Charlie8 DNA MER1_type 37 172 -2245 2032 211 135 40 chr10 12701959 12702370 -132886918 - Charlie2 DNA MER1_type -16 2846 2475 2224 100 0 0 chr10 12702370 12702671 -132886617 - AluSq SINE Alu -12 301 1 2032 211 135 40 chr10 12702671 12703017 -132886271 - Charlie2 DNA MER1_type -387 2475 2017 349 86 86 0 chr10 12703271 12703399 -132885889 + (TA)n Simple_repeat Simple_repeat 2 140 0 2165 87 7 10 chr10 12703518 12703817 -132885471 - AluSq SINE Alu -15 298 1 22 0 0 0 chr10 12703843 12703865 -132885423 + AT_rich Low_complexity Low_complexity 1 22 0 534 265 132 37 chr10 12703904 12704229 -132885059 - L1ME4a LINE L1 0 6121 5766 1551 162 9 58 chr10 12704252 12704580 -132884708 - AluJo SINE Alu 0 312 1 4305 185 82 21 chr10 12704631 12704691 -132884597 - L1MB8 LINE L1 0 6178 6123 2183 108 3 0 chr10 12704691 12704997 -132884291 + AluSq SINE Alu 1 307 -6 4305 185 82 21 chr10 12704997 12706719 -132882569 - L1MB8 LINE L1 -55 6123 4302 1583 111 13 0 chr10 12706848 12707083 -132882205 - L1PA15 LINE L1 -269 5896 5659 249 267 163 12 chr10 12707094 12707180 -132882108 - MIR SINE MIR -67 141 43 597 163 0 122 chr10 12707288 12707435 -132881853 + MLT2B1 LTR ERVL 131 259 -261 1407 124 0 0 chr10 12707435 12707637 -132881651 + AluSx SINE Alu 64 265 -47 5661 77 60 30 chr10 12709377 12710179 -132879109 - LTR12 LTR ERV1 0 826 1 2060 120 0 3 chr10 12710304 12710596 -132878692 - AluSg SINE Alu -18 292 2 1819 118 37 0 chr10 12710598 12710869 -132878419 - AluSx SINE Alu -14 298 18 31 44 0 0 chr10 12710877 12710922 -132878366 + AT_rich Low_complexity Low_complexity 1 45 0 845 162 0 0 chr10 12710922 12711064 -132878224 - FLAM_C SINE Alu -1 142 1 334 201 262 17 chr10 12711180 12711319 -132877969 - MIR SINE MIR -43 165 2 2322 85 0 7 chr10 12711410 12711717 -132877571 + AluSg SINE Alu 1 305 -5 815 110 0 24 chr10 12711719 12711846 -132877442 - AluJo/FLAM SINE Alu -188 124 1 1677 126 11 4 chr10 12712422 12712685 -132876603 - AluSx SINE Alu -47 265 1 2141 79 7 0 chr10 12712691 12712981 -132876307 - AluY SINE Alu -19 292 1 212 163 0 0 chr10 12713066 12713109 -132876179 + A-rich Low_complexity Low_complexity 1 43 0 2092 113 0 3 chr10 12713289 12713582 -132875706 - AluSx SINE Alu -20 292 1 280 162 27 81 chr10 12713635 12713709 -132875579 - L1ME LINE L1 -394 5776 5707 1668 168 10 7 chr10 12714156 12714453 -132874835 - AluJb SINE Alu -14 298 1 408 165 12 35 chr10 12714662 12714747 -132874541 - Tigger5 DNA MER2_type 0 2323 2241 820 134 84 0 chr10 12714763 12714905 -132874383 - AluSg/x SINE Alu -23 287 134 2030 98 0 0 chr10 12714908 12715183 -132874105 - AluSx SINE Alu 0 312 38 192 77 0 0 chr10 12715284 12715310 -132873978 + (GGGAGA)n Simple_repeat Simple_repeat 6 31 0 2799 262 90 73 chr10 12715310 12716532 -132872756 - L1MDb LINE L1 -2845 3235 2036 6875 58 11 14 chr10 12716532 12718079 -132871209 - SVA Other Other -799 1386 1 2799 262 90 73 chr10 12718079 12718177 -132871111 - L1MDb LINE L1 -4044 2036 1941 1512 89 42 5 chr10 12718177 12718421 -132870867 - AluY SINE Alu 0 311 60 401 51 17 17 chr10 12718421 12718480 -132870808 - AluYb8 SINE Alu -187 131 73 2799 262 90 73 chr10 12718480 12718641 -132870647 - L1MDb LINE L1 -4139 1941 1784 2303 75 0 0 chr10 12718641 12718934 -132870354 + AluY SINE Alu 1 293 -18 2799 262 90 73 chr10 12718934 12719977 -132869311 - L1MDb LINE L1 -4296 1784 656 1847 145 14 14 chr10 12719977 12720273 -132869015 - AluSx SINE Alu -16 296 1 2799 262 90 73 chr10 12720273 12720486 -132868802 - L1MDb LINE L1 -5424 656 448 275 316 15 30 chr10 12720556 12720689 -132868599 - L1MDb LINE L1 -5615 455 325 1809 125 82 0 chr10 12720851 12721132 -132868156 + AluJb SINE Alu 1 304 -8 662 174 9 0 chr10 12721142 12721257 -132868031 + FLAM_A SINE Alu 20 135 -7 2118 83 0 65 chr10 12721569 12721894 -132867394 - AluSx SINE Alu -6 306 3 771 271 72 0 chr10 12722224 12722460 -132866828 - MIR SINE MIR -6 256 4 276 286 98 30 chr10 12722772 12722905 -132866383 - MIR3 SINE MIR 0 208 67 190 162 54 0 chr10 12722907 12722944 -132866344 - MIR SINE MIR -69 139 101 1433 166 0 0 chr10 12722957 12723198 -132866090 - AluJo SINE Alu -4 308 68 311 149 0 0 chr10 12723199 12723246 -132866042 - AluJb SINE Alu -188 114 68 743 148 0 0 chr10 12723247 12723355 -132865933 - AluJo/FLAM SINE Alu -198 114 7 201 311 33 33 chr10 12723441 12723531 -132865757 - MIR SINE MIR -82 180 91 263 301 0 0 chr10 12723627 12723700 -132865588 + MER94 DNA DNA 8 80 -54 519 263 105 0 chr10 12724550 12724702 -132864586 + MIR3 SINE MIR 41 208 0 2132 110 3 3 chr10 12724998 12725298 -132863990 + AluSx SINE Alu 1 300 -12 22 56 0 0 chr10 12726355 12726391 -132862897 + AT_rich Low_complexity Low_complexity 1 36 0 2693 19 0 0 chr10 12726498 12726805 -132862483 - AluYa5 SINE Alu -4 307 1 275 184 0 0 chr10 12726772 12726821 -132862467 - AluSg/x SINE Alu -134 168 120 4424 89 47 7 chr10 12726835 12727455 -132861833 + L1MA2 LINE L1 5660 6304 0 508 293 14 48 chr10 12727966 12728174 -132861114 - MLT1J LTR MaLR -54 457 257 504 48 0 0 chr10 12728374 12728437 -132860851 + (TCTA)n Simple_repeat Simple_repeat 3 65 0 1136 96 0 0 chr10 12728457 12728603 -132860685 - AluSg/x SINE Alu -33 279 134 2254 97 3 0 chr10 12728603 12728892 -132860396 - AluSx SINE Alu -22 290 1 1184 233 110 14 chr10 12728893 12729258 -132860030 - MLT1J2 LTR MaLR -37 413 14 247 225 65 87 chr10 12730073 12730211 -132859077 - MIR SINE MIR -70 192 58 338 165 45 105 chr10 12730320 12730453 -132858835 - L1MC4 LINE L1 -9 8033 7811 2023 116 0 0 chr10 12730498 12730798 -132858490 - AluSx SINE Alu 0 306 7 226 261 0 0 chr10 12731205 12731251 -132858037 - L1MC/D LINE L1 -1987 5821 5776 2110 142 0 0 chr10 12731294 12731597 -132857691 - AluSx SINE Alu -9 303 1 234 250 0 0 chr10 12731638 12731690 -132857598 - L1MC/D LINE L1 -527 5594 5543 270 196 0 98 chr10 12731745 12731838 -132857450 - L1M3 LINE L1 -730 5441 5358 183 80 0 0 chr10 12733111 12733136 -132856152 + (A)n Simple_repeat Simple_repeat 1 25 0 671 111 11 0 chr10 12733201 12733291 -132855997 - AluJ/FLAM SINE Alu -220 92 2 348 209 0 0 chr10 12733312 12733379 -132855909 - L1MC/D LINE L1 -2032 5776 5710 1586 156 7 68 chr10 12734147 12734455 -132854833 - AluJo SINE Alu -23 289 1 2236 107 10 3 chr10 12735577 12735885 -132853403 - AluSg SINE Alu 0 310 1 387 0 0 0 chr10 12736068 12736111 -132853177 + (TTCC)n Simple_repeat Simple_repeat 3 45 0 1644 152 22 14 chr10 12736111 12736388 -132852900 - AluJb SINE Alu -21 291 13 2050 119 0 13 chr10 12736965 12737268 -132852020 - AluSx SINE Alu -13 299 1 2079 110 7 10 chr10 12737278 12737570 -132851718 - AluSx SINE Alu -21 291 1 1718 134 4 36 chr10 12739468 12739744 -132849544 + AluSx SINE Alu 43 309 -3 2329 87 0 0 chr10 12739787 12740085 -132849203 + AluSg SINE Alu 1 298 -12 3735 21 5 5 chr10 12740818 12741239 -132848049 + L1PA4 LINE L1 5735 6155 0 204 40 0 0 chr10 12741924 12741949 -132847339 + (TC)n Simple_repeat Simple_repeat 1 25 0 339 225 180 45 chr10 12742336 12742504 -132846784 + MIR SINE MIR 19 212 -50 2788 177 29 38 chr10 12742665 12742713 -132846575 - L1MB3 LINE L1 -3 6180 6133 2024 138 0 41 chr10 12742713 12743031 -132846257 - AluJb SINE Alu -7 305 1 2788 177 29 38 chr10 12743031 12743120 -132846168 - L1MB3 LINE L1 -50 6133 6045 2223 123 0 0 chr10 12743120 12743422 -132845866 - AluSx SINE Alu -10 302 1 2788 177 29 38 chr10 12743422 12743843 -132845445 - L1MB3 LINE L1 -138 6045 5626 261 57 0 0 chr10 12744514 12744549 -132844739 + (TGAA)n Simple_repeat Simple_repeat 1 35 0 275 326 28 14 chr10 12745497 12745638 -132843650 + L1MEd LINE L1 1114 1256 -4863 2119 117 3 0 chr10 12745988 12746279 -132843009 + AluSx SINE Alu 1 292 -20 498 57 0 0 chr10 12747728 12747798 -132841490 + (TG)n Simple_repeat Simple_repeat 2 71 0 21 0 0 0 chr10 12748035 12748056 -132841232 + AT_rich Low_complexity Low_complexity 1 21 0 788 183 0 0 chr10 12748955 12749075 -132840213 + FRAM SINE Alu 32 151 -25 1269 147 9 28 chr10 12749330 12749541 -132839747 + AluJo SINE Alu 87 293 -19 277 271 93 21 chr10 12749825 12749965 -132839323 + MER5B DNA MER1_type 29 178 0 234 218 90 13 chr10 12750326 12750404 -132838884 + MLT1J2 LTR MaLR 18 101 -349 386 287 39 16 chr10 12750594 12750723 -132838565 + MLT1I LTR MaLR 254 385 -24 885 159 0 0 chr10 12752590 12752722 -132836566 - FRAM SINE Alu -27 149 18 355 315 0 0 chr10 12754896 12755004 -132834284 + (TG)n Simple_repeat Simple_repeat 1 108 0 204 375 62 8 chr10 12755010 12755138 -132834150 + L2 LINE L2 3179 3313 0 205 255 319 0 chr10 12757255 12757349 -132831939 - L2 LINE L2 0 3272 3149 1874 163 3 49 chr10 12758155 12758481 -132830807 + AluJb SINE Alu 1 311 -1 1082 306 47 26 chr10 12759722 12760244 -132829044 + L2 LINE L2 2557 3087 -226 556 240 16 31 chr10 12760424 12760553 -132828735 - MER58A DNA MER1_type 0 128 2 254 294 74 61 chr10 12760555 12760718 -132828570 + L2 LINE L2 3141 3305 -8 214 287 54 62 chr10 12761592 12761721 -132827567 - MIR3 SINE MIR 0 208 81 719 224 161 24 chr10 12761995 12762200 -132827088 + MIR SINE MIR 8 240 -22 5163 132 10 1 chr10 12763579 12764373 -132824915 + L1PA10 LINE L1 5231 6035 -133 1658 192 13 0 chr10 12765219 12765527 -132823761 - AluJo SINE Alu 0 312 1 1978 192 86 8 chr10 12766697 12767092 -132822196 + MSTB LTR MaLR 1 426 0 1876 139 4 14 chr10 12767096 12767407 -132821881 - AluSx SINE Alu 0 312 5 196 318 45 0 chr10 12767619 12767685 -132821603 + L2 LINE L2 3245 3313 0 21 36 0 0 chr10 12768636 12768664 -132820624 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr10 12768695 12768717 -132820571 + AT_rich Low_complexity Low_complexity 1 22 0 1727 199 22 14 chr10 12768890 12769247 -132820041 - L1MC3 LINE L1 -21 7764 7405 2018 156 6 3 chr10 12770399 12770714 -132818574 - 7SLRNA srpRNA srpRNA -4 316 1 2346 133 41 36 chr10 12774008 12774370 -132814918 - THE1B LTR MaLR 0 364 1 1605 171 7 27 chr10 12776231 12776529 -132812759 + L1PA12 LINE L1 5861 6152 -16 647 160 0 0 chr10 12777472 12777566 -132811722 - FRAM SINE Alu -30 146 53 243 88 0 0 chr10 12778689 12778723 -132810565 + (TGAA)n Simple_repeat Simple_repeat 4 37 0 470 301 27 27 chr10 12779641 12779824 -132809464 + MIR SINE MIR 52 234 -28 22 80 0 0 chr10 12780099 12780149 -132809139 + AT_rich Low_complexity Low_complexity 1 50 0 246 62 0 0 chr10 12780737 12780769 -132808519 + (CA)n Simple_repeat Simple_repeat 1 32 0 313 294 40 16 chr10 12780778 12780904 -132808384 - L1MC4 LINE L1 -1339 6703 6575 250 206 43 11 chr10 12780904 12780996 -132808292 + (TA)n Simple_repeat Simple_repeat 1 95 0 2432 66 0 0 chr10 12781159 12781462 -132807826 - AluY SINE Alu -8 303 1 209 89 44 22 chr10 12782615 12782660 -132806628 + (TA)n Simple_repeat Simple_repeat 1 46 0 360 308 123 0 chr10 12782773 12782903 -132806385 + MIR SINE MIR 8 153 -109 2388 207 16 16 chr10 12782906 12783495 -132805793 + L1M4 LINE L1 4812 5399 -785 1958 105 8 0 chr10 12783495 12783761 -132805527 + AluSx SINE Alu 38 305 -7 2388 207 16 16 chr10 12783761 12783840 -132805448 + L1M4 LINE L1 5399 5476 -708 195 42 0 0 chr10 12784306 12784330 -132804958 + (T)n Simple_repeat Simple_repeat 1 24 0 23 54 0 0 chr10 12784823 12784860 -132804428 + AT_rich Low_complexity Low_complexity 1 37 0 330 284 25 62 chr10 12784949 12785111 -132804177 + MIR SINE MIR 82 237 -25 26 0 0 0 chr10 12785879 12785905 -132803383 + AT_rich Low_complexity Low_complexity 1 26 0 1718 201 0 10 chr10 12786225 12786538 -132802750 - AluJo SINE Alu -2 310 1 403 377 8 8 chr10 12786947 12787077 -132802211 - MER91A DNA MER1_type -66 130 1 1300 186 34 15 chr10 12787652 12787916 -132801372 + AluJb SINE Alu 34 302 -10 590 60 0 12 chr10 12787946 12788030 -132801258 + (GGAA)n Simple_repeat Simple_repeat 2 84 0 262 374 25 37 chr10 12788330 12788493 -132800795 - L2 LINE L2 -17 3255 3095 1979 128 0 10 chr10 12790966 12791299 -132797989 + AluSx SINE Alu 1 330 0 246 320 0 0 chr10 12791671 12791774 -132797514 + A-rich Low_complexity Low_complexity 1 103 0 5394 122 12 10 chr10 12792437 12793299 -132795989 + L1PA13 LINE L1 5301 6163 0 310 329 58 27 chr10 12793492 12793784 -132795504 + HAL1 LINE L1 63 363 -2144 484 225 183 6 chr10 12794007 12794176 -132795112 + HAL1 LINE L1 2309 2507 0 220 232 89 18 chr10 12794282 12794338 -132794950 - L2 LINE L2 -8 3305 3246 196 345 0 0 chr10 12796499 12796557 -132792731 + L2 LINE L2 3205 3262 -10 23 0 0 0 chr10 12799223 12799246 -132790042 + AT_rich Low_complexity Low_complexity 1 23 0 12612 152 64 11 chr10 12799331 12801627 -132787661 + Tigger1 DNA MER2_type 1 2417 -1 250 297 34 61 chr10 12802066 12802214 -132787074 - MIR SINE MIR -31 231 88 1032 121 0 46 chr10 12802529 12802703 -132786585 + AluSg/x SINE Alu 145 310 0 1460 157 33 74 chr10 12802713 12803012 -132786276 + AluJo SINE Alu 1 287 -25 191 61 30 0 chr10 12803015 12803048 -132786240 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 597 185 247 18 chr10 12803056 12803283 -132786005 + L1ME4a LINE L1 5841 6119 -2 201 255 0 20 chr10 12803571 12803622 -132785666 - MIR SINE MIR -57 205 156 1339 137 4 57 chr10 12803984 12804232 -132785056 + AluJo SINE Alu 76 310 -2 1230 213 92 5 chr10 12805195 12805717 -132783571 - L1MC/D LINE L1 -649 5517 4985 2541 46 9 9 chr10 12805718 12806045 -132783243 - L1PA5 LINE L1 -4 6150 5824 1950 73 1 2 chr10 12806047 12806318 -132782970 + L1PA5 LINE L1 5565 5800 -354 263 206 16 16 chr10 12806318 12806381 -132782907 + CT-rich Low_complexity Low_complexity 1 63 0 867 256 0 0 chr10 12806381 12806596 -132782692 - L1MC/D LINE L1 -1199 4947 4733 * 1059 307 47 25 chr10 12806594 12807109 -132782179 + L1MC2 LINE L1 108 633 -5763 394 233 73 7 chr10 12807100 12807250 -132782038 + L1MC2 LINE L1 3308 3467 -2748 * 1771 45 0 5 chr10 12807589 12807810 -132781478 + L1PA5 LINE L1 5694 5913 -241 28 107 0 0 chr10 12808306 12808418 -132780870 + AT_rich Low_complexity Low_complexity 1 112 0 28 0 0 0 chr10 12809401 12809429 -132779859 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr10 12809822 12809845 -132779443 + AT_rich Low_complexity Low_complexity 1 23 0 220 277 0 32 chr10 12809908 12810002 -132779286 + (TATATG)n Simple_repeat Simple_repeat 4 94 0 32 43 0 0 chr10 12810354 12810400 -132778888 + AT_rich Low_complexity Low_complexity 1 46 0 1983 224 29 91 chr10 12811597 12812487 -132776801 + L1MC2 LINE L1 3886 4720 -1495 4984 195 46 14 chr10 12812504 12813713 -132775575 + L1MC2 LINE L1 5152 6404 -9 219 88 0 0 chr10 12814421 12814455 -132774833 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 218 259 17 35 chr10 12815317 12815375 -132773913 + L3 LINE CR1 1519 1575 -2 2102 53 0 0 chr10 12816045 12816309 -132772979 + L1PA5 LINE L1 5891 6154 0 251 339 138 0 chr10 12816934 12817064 -132772224 - MIR SINE MIR -48 214 67 25 0 0 0 chr10 12819623 12819648 -132769640 + AT_rich Low_complexity Low_complexity 1 25 0 2286 100 7 0 chr10 12820608 12820917 -132768371 + AluSx SINE Alu 1 311 -1 376 304 10 0 chr10 12822157 12822259 -132767029 + MER69 DNA AcHobo 4 106 -1120 489 121 17 9 chr10 12822266 12822382 -132766906 + (TCTA)n Simple_repeat Simple_repeat 1 117 0 396 302 217 0 chr10 12822386 12822598 -132766690 + MER69 DNA AcHobo 133 390 -2136 1422 247 88 6 chr10 12822601 12823144 -132766144 + MER69 DNA AcHobo 1795 2382 -144 252 373 0 8 chr10 12823216 12823342 -132765946 - L3 LINE CR1 -264 1313 1189 1014 130 7 7 chr10 12823427 12823581 -132765707 - AluSg/x SINE Alu -32 280 127 325 45 0 0 chr10 12823681 12823725 -132765563 - L1P LINE L1 -1785 4361 4318 239 349 47 16 chr10 12823853 12823982 -132765306 + L2 LINE L2 3142 3274 -39 262 334 68 68 chr10 12824967 12825207 -132764081 - L3 LINE CR1 -737 840 598 649 199 80 11 chr10 12825207 12825383 -132763905 + MER5A DNA MER1_type 1 188 -1 262 334 68 68 chr10 12825383 12825585 -132763703 - L3 LINE CR1 -978 599 398 1217 229 123 13 chr10 12825829 12826204 -132763084 + MER63B DNA MER1_type 21 436 0 300 53 0 0 chr10 12826394 12826432 -132762856 + (TG)n Simple_repeat Simple_repeat 2 39 0 336 276 0 0 chr10 12827478 12827554 -132761734 + L2 LINE L2 3197 3272 0 237 333 111 11 chr10 12828063 12828153 -132761135 + MIR SINE MIR 43 141 -67 319 269 19 9 chr10 12828257 12828365 -132760923 + MER103 DNA DNA 47 155 -11 1536 160 51 24 chr10 12829556 12829849 -132759439 + AluJo SINE Alu 1 301 -11 225 276 26 40 chr10 12830229 12830305 -132758983 + MIR3 SINE MIR 83 157 -51 207 279 54 63 chr10 12830783 12830894 -132758394 - MIR SINE MIR -128 134 25 1224 156 49 0 chr10 12831800 12832025 -132757263 + MER46A DNA MER2_type 1 236 0 24 0 0 0 chr10 12832099 12832123 -132757165 + AT_rich Low_complexity Low_complexity 1 24 0 1873 156 0 0 chr10 12834533 12834850 -132754438 + AluSx SINE Alu 1 317 0 296 82 0 20 chr10 12835065 12835114 -132754174 + (CA)n Simple_repeat Simple_repeat 2 49 0 180 111 0 0 chr10 12835783 12835810 -132753478 + (CA)n Simple_repeat Simple_repeat 2 28 0 534 290 97 6 chr10 12837664 12837840 -132751448 + MIR SINE MIR 46 237 -25 224 322 67 0 chr10 12838052 12838142 -132751146 - L3 LINE CR1 -505 1072 977 203 327 0 0 chr10 12838417 12838469 -132750819 + (TG)n Simple_repeat Simple_repeat 2 53 0 365 351 50 50 chr10 12838623 12838882 -132750406 + L2 LINE L2 2990 3248 -24 1386 142 4 49 chr10 12839068 12839314 -132749974 - L1P4 LINE L1 -455 5711 5477 193 348 96 52 chr10 12839807 12840037 -132749251 - L3 LINE CR1 -160 1417 1178 339 281 90 12 chr10 12840977 12841144 -132748144 + L1M4 LINE L1 2439 2618 -3528 1785 190 57 49 chr10 12841281 12841686 -132747602 + L1PA13 LINE L1 1203 1610 -5177 1337 113 6 63 chr10 12841810 12842037 -132747251 + pTR5 LTR ERV1 172 410 -2028 2849 19 0 0 chr10 12842037 12842353 -132746935 + AluYb8 SINE Alu 1 316 -2 1337 113 6 63 chr10 12842353 12842407 -132746881 + pTR5 LTR ERV1 410 2331 -107 186 335 110 35 chr10 12843441 12843614 -132745674 + L3 LINE CR1 260 445 -1132 1173 227 33 3 chr10 12844366 12844670 -132744618 + MER33 DNA MER1_type 10 322 -2 21 36 0 0 chr10 12844792 12844820 -132744468 + AT_rich Low_complexity Low_complexity 1 28 0 1909 121 7 18 chr10 12844993 12845303 -132743985 + AluSx SINE Alu 3 309 0 189 303 117 35 chr10 12845501 12845646 -132743642 - L2 LINE L2 -215 3057 2901 26 0 0 0 chr10 12846154 12846180 -132743108 + AT_rich Low_complexity Low_complexity 1 26 0 451 152 65 11 chr10 12846435 12846527 -132742761 - MER61B-int LTR ERV1 -4714 503 407 851 148 107 31 chr10 12846538 12846734 -132742554 - MER61B-int LTR ERV1 -4763 454 244 1167 216 98 34 chr10 12847064 12847360 -132741928 - MER61B LTR ERV1 -28 396 1 1931 173 60 41 chr10 12848767 12849183 -132740105 - MER61C LTR ERV1 -10 424 1 276 330 121 12 chr10 12849187 12849360 -132739928 + MIR SINE MIR 31 222 -40 435 240 33 60 chr10 12849604 12849754 -132739534 + L2 LINE L2 3153 3298 -15 25 31 0 0 chr10 12849764 12849796 -132739492 + AT_rich Low_complexity Low_complexity 1 32 0 245 204 0 0 chr10 12849811 12849865 -132739423 + L1 LINE L1 2407 2460 -3686 28 29 0 0 chr10 12850087 12850122 -132739166 + AT_rich Low_complexity Low_complexity 1 35 0 1785 158 41 7 chr10 12851234 12851550 -132737738 - AluSx SINE Alu 0 312 1 1976 117 21 0 chr10 12852019 12852301 -132736987 + AluSg SINE Alu 13 300 -10 351 0 0 0 chr10 12852536 12852575 -132736713 + (CA)n Simple_repeat Simple_repeat 2 40 0 5479 50 1 6 chr10 12852612 12853293 -132735995 - L1PA5 LINE L1 -3 6151 5474 12921 116 26 9 chr10 12853299 12855323 -132733965 + MER61B-int LTR ERV1 3311 5217 0 898 199 39 5 chr10 12855323 12855538 -132733750 + MER61B LTR ERV1 1 315 -110 278 272 25 0 chr10 12855653 12855734 -132733554 + L1P LINE L1 3728 3810 -2336 1534 253 90 25 chr10 12855845 12857015 -132732273 - L1M4 LINE L1 -3595 2375 1130 2059 268 53 91 chr10 12857017 12857434 -132731854 - L1M4 LINE L1 -4811 1080 649 216 0 0 0 chr10 12857434 12857458 -132731830 + (TTG)n Simple_repeat Simple_repeat 1 24 0 2059 268 53 91 chr10 12857458 12858161 -132731127 - L1M4 LINE L1 -5242 649 3 2002 224 55 14 chr10 12858164 12858243 -132731045 + L1M4 LINE L1 4677 4751 -1433 4818 86 41 5 chr10 12858243 12858907 -132730381 - LTR12 LTR ERV1 0 688 1 2002 224 55 14 chr10 12858907 12859296 -132729992 + L1M4 LINE L1 4751 5191 -993 201 74 0 0 chr10 12859296 12859323 -132729965 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 2002 224 55 14 chr10 12859323 12859618 -132729670 + L1M4 LINE L1 5191 5472 -712 6525 63 18 24 chr10 12859721 12860604 -132728684 + SVA Other Other 508 1385 -1 325 238 0 0 chr10 12860616 12860696 -132728592 + L1ME1 LINE L1 3289 3368 -2778 985 213 64 0 chr10 12860718 12860920 -132728368 - MER58A DNA MER1_type 0 224 10 4043 232 43 41 chr10 12860940 12862218 -132727070 + L1ME1 LINE L1 3384 4664 -1482 2427 219 50 23 chr10 12862219 12862684 -132726604 + L1ME1 LINE L1 5266 5756 -410 2196 118 0 0 chr10 12862684 12862981 -132726307 + AluSg1 SINE Alu 1 297 -12 2427 219 50 23 chr10 12862981 12863180 -132726108 + L1ME1 LINE L1 5756 5948 -218 1949 96 0 8 chr10 12863180 12863441 -132725847 + AluY SINE Alu 1 259 -52 5623 235 88 7 chr10 12863550 12865923 -132723365 - L1MC3 LINE L1 -743 5821 4721 307 246 42 0 chr10 12865949 12866067 -132723221 - L1MC3 LINE L1 -2989 3575 3453 1136 212 63 27 chr10 12866076 12866779 -132722509 - L1MC3 LINE L1 -4499 2065 1090 1011 152 40 25 chr10 12866779 12866977 -132722311 + LTR54 LTR ERV1 1 201 -309 1583 268 70 75 chr10 12866977 12867855 -132721433 - L1MC3 LINE L1 -5072 973 101 2177 102 3 0 chr10 12868631 12868916 -132720372 + AluSx SINE Alu 1 286 -26 30 0 0 0 chr10 12868916 12868946 -132720342 + AT_rich Low_complexity Low_complexity 1 30 0 284 172 0 16 chr10 12869183 12869247 -132720041 + (CATATA)n Simple_repeat Simple_repeat 2 64 0 1558 248 45 45 chr10 12869498 12870003 -132719285 + MLT1D LTR MaLR 1 505 0 21 0 0 0 chr10 12870061 12870082 -132719206 + AT_rich Low_complexity Low_complexity 1 21 0 255 379 93 6 chr10 12870925 12871086 -132718202 + MIR3 SINE MIR 7 181 -27 181 121 0 52 chr10 12871087 12871145 -132718143 + (CAAAA)n Simple_repeat Simple_repeat 1 55 0 22 70 0 0 chr10 12871182 12871225 -132718063 + AT_rich Low_complexity Low_complexity 1 43 0 22 0 0 0 chr10 12871407 12871429 -132717859 + AT_rich Low_complexity Low_complexity 1 22 0 1913 208 36 8 chr10 12871650 12872035 -132717253 + MSTD LTR MaLR 1 396 0 1250 313 31 12 chr10 12872314 12872733 -132716555 + LTR16A LTR ERVL 15 441 -9 1224 201 60 104 chr10 12874489 12874772 -132714516 - MER34 LTR ERV1 0 542 295 384 22 0 0 chr10 12874772 12874817 -132714471 + (CA)n Simple_repeat Simple_repeat 2 46 0 1224 201 60 104 chr10 12874817 12875100 -132714188 - MER34 LTR ERV1 -247 295 1 2527 78 0 0 chr10 12876742 12877050 -132712238 + AluSq SINE Alu 1 308 -5 352 267 133 0 chr10 12877537 12877642 -132711646 + L2 LINE L2 3194 3312 -1 2292 83 7 3 chr10 12878794 12879094 -132710194 + AluSp SINE Alu 1 301 -12 435 195 23 0 chr10 12879224 12879311 -132709977 + MIR3 SINE MIR 89 177 -31 1827 170 3 3 chr10 12879884 12880178 -132709110 + AluJo SINE Alu 1 294 -18 992 285 156 41 chr10 12880886 12881854 -132707434 - HAL1 LINE L1 -938 1569 491 283 203 145 0 chr10 12882082 12882151 -132707137 - HAL1 LINE L1 -2305 202 124 1351 184 88 42 chr10 12882214 12882568 -132706720 + MLT1B LTR MaLR 21 390 0 24 53 0 0 chr10 12882648 12882686 -132706602 + AT_rich Low_complexity Low_complexity 1 38 0 11552 232 19 11 chr10 12883367 12886246 -132703042 + L1PA15 LINE L1 1733 4635 -1511 2276 94 10 3 chr10 12886255 12886562 -132702726 + AluSc SINE Alu 1 309 0 4487 144 4 0 chr10 12886565 12887272 -132702016 + L1PA15 LINE L1 5456 6165 0 23 0 0 0 chr10 12888241 12888264 -132701024 + AT_rich Low_complexity Low_complexity 1 23 0 365 217 100 70 chr10 12889055 12889285 -132700003 + MER34C LTR ERV1 348 584 -1 452 250 61 49 chr10 12889478 12889684 -132699604 - MER110-int LTR ERV1 -1652 5149 2695 731 130 9 9 chr10 12889714 12889829 -132699459 - AluSp/q SINE Alu -18 295 181 1552 183 3 45 chr10 12890019 12890129 -132699159 + AluJb SINE Alu 3 116 -196 1967 149 24 53 chr10 12890129 12890504 -132698784 - THE1B LTR MaLR 0 364 1 11399 100 24 1 chr10 12890505 12892048 -132697240 - THE1B-int LTR MaLR -1 1579 2 1829 163 13 43 chr10 12892049 12892424 -132696864 - THE1B LTR MaLR 0 364 1 1552 183 3 45 chr10 12892424 12892620 -132696668 + AluJb SINE Alu 115 300 -12 1723 153 65 121 chr10 12892667 12893156 -132696132 - MER4C LTR ERV1 0 465 4 223 163 0 0 chr10 12893786 12893829 -132695459 + CT-rich Low_complexity Low_complexity 2 44 0 1445 196 36 11 chr10 12896407 12896687 -132692601 + AluJo SINE Alu 2 288 -24 512 211 6 25 chr10 12896689 12896850 -132692438 + GA-rich Low_complexity Low_complexity 3 160 0 185 256 0 0 chr10 12897128 12897167 -132692121 + MIR3 SINE MIR 116 154 -54 493 145 24 0 chr10 12897275 12897358 -132691930 - L1MA3 LINE L1 -3 6302 6218 18079 35 2 1 chr10 12898380 12900905 -132688383 - L1P2 LINE L1 -381 5773 3248 1697 175 18 33 chr10 12901013 12901344 -132687944 - L1P4 LINE L1 -380 5786 5461 847 69 0 0 chr10 12901345 12901447 -132687841 + AluY SINE Alu 196 297 -14 1444 182 20 3 chr10 12901447 12901843 -132687445 - L1P4 LINE L1 -695 5470 5010 206 250 0 0 chr10 12902203 12902247 -132687041 + CT-rich Low_complexity Low_complexity 2 45 0 289 176 0 0 chr10 12902550 12902601 -132686687 + L1M1 LINE L1 2027 2077 -5488 180 296 82 20 chr10 12903056 12903154 -132686134 - L2 LINE L2 -172 3100 2997 3616 129 0 19 chr10 12903841 12904258 -132685030 + MER1A DNA MER1_type 2 408 -2292 1931 125 60 0 chr10 12904258 12904539 -132684749 + AluSx SINE Alu 1 298 -14 3616 129 0 19 chr10 12904539 12904657 -132684631 + MER1A DNA MER1_type 408 527 0 2322 90 0 3 chr10 12905539 12905828 -132683460 - AluSx SINE Alu -24 288 1 330 254 103 67 chr10 12906357 12906581 -132682707 + MIR SINE MIR 20 251 -11 248 311 25 16 chr10 12906611 12906733 -132682555 - MIR SINE MIR -105 157 35 243 170 0 0 chr10 12906917 12906964 -132682324 + CT-rich Low_complexity Low_complexity 5 51 0 2155 98 11 0 chr10 12906964 12907241 -132682047 - AluSx SINE Alu -32 280 1 1521 175 20 33 chr10 12907327 12907630 -132681658 - AluJo SINE Alu -13 299 1 284 254 0 15 chr10 12909061 12909128 -132680160 - L2 LINE L2 0 3313 3248 378 304 119 49 chr10 12909434 12910006 -132679282 - L2 LINE L2 -453 2861 2250 2504 76 0 10 chr10 12910054 12910368 -132678920 + AluY SINE Alu 1 311 0 1915 157 3 0 chr10 12911065 12911351 -132677937 + AluSq SINE Alu 6 292 -21 406 167 25 142 chr10 12911742 12911806 -132677482 + MER5B DNA MER1_type 1 46 -132 1446 176 93 17 chr10 12911806 12912096 -132677192 + AluJo SINE Alu 1 312 0 406 167 25 142 chr10 12912096 12912151 -132677137 + MER5B DNA MER1_type 46 106 -72 2364 100 0 0 chr10 12913057 12913366 -132675922 + AluSq SINE Alu 3 311 -2 2313 78 0 14 chr10 12913689 12913985 -132675303 - AluY SINE Alu -3 308 17 1222 224 68 36 chr10 12914814 12915198 -132674090 - MSTD LTR MaLR 0 396 1 1055 192 63 1 chr10 12915757 12915990 -132673298 - MLT2B1 LTR ERVL 0 520 223 951 200 6 0 chr10 12915992 12916162 -132673126 + FRAM SINE Alu 1 170 -6 1261 153 9 31 chr10 12916162 12916385 -132672903 - MLT2B2 LTR ERVL -297 218 1 413 36 18 0 chr10 12916448 12916503 -132672785 + (GA)n Simple_repeat Simple_repeat 1 56 0 224 236 0 0 chr10 12916742 12916797 -132672491 + T-rich Low_complexity Low_complexity 1 55 0 2499 51 0 41 chr10 12917585 12917900 -132671388 + AluY SINE Alu 5 306 -5 23 0 0 53 chr10 12918059 12918075 -132671213 + AT_rich Low_complexity Low_complexity 1 16 -20 2257 101 0 0 chr10 12918075 12918362 -132670926 + AluSg SINE Alu 1 287 -23 23 0 0 53 chr10 12918362 12918383 -132670905 + AT_rich Low_complexity Low_complexity 16 36 0 2399 99 0 3 chr10 12918552 12918856 -132670432 + AluSq SINE Alu 1 303 -10 1338 161 60 12 chr10 12918869 12919118 -132670170 + AluSx SINE Alu 32 292 -20 342 188 9 134 chr10 12919255 12919320 -132669968 + MER5A DNA MER1_type 9 56 -133 2167 110 0 28 chr10 12919320 12919639 -132669649 + AluSg SINE Alu 1 310 0 342 188 9 134 chr10 12919639 12919685 -132669603 + MER5A DNA MER1_type 56 106 -83 259 398 31 0 chr10 12919848 12919976 -132669312 + L2 LINE L2 3119 3250 -22 1087 147 107 13 chr10 12920295 12920519 -132668769 + THE1C LTR MaLR 1 245 -130 1777 146 13 29 chr10 12920768 12921076 -132668212 - AluJo SINE Alu -9 303 1 1565 158 21 79 chr10 12921752 12922124 -132667164 - AluJo SINE Alu 0 354 2 1989 140 0 52 chr10 12922440 12922768 -132666520 - AluSx SINE Alu -1 311 1 2252 145 51 17 chr10 12922809 12923222 -132666066 - MSTA LTR MaLR -1 427 1 2272 123 0 0 chr10 12923231 12923541 -132665747 - AluSg SINE Alu 0 310 1 1308 248 174 2 chr10 12923699 12924159 -132665129 + Charlie7 DNA MER1_type 1 539 -2073 459 227 75 64 chr10 12924179 12924474 -132664814 + Charlie7 DNA MER1_type 2314 2611 -1 2782 132 6 9 chr10 12924483 12924939 -132664349 - MER1A DNA MER1_type 0 529 30 278 261 34 116 chr10 12926108 12926221 -132663067 - MIR SINE MIR -8 254 164 1696 157 0 60 chr10 12926221 12926414 -132662874 - AluJo SINE Alu -8 304 136 2310 65 3 78 chr10 12926414 12926736 -132662552 + AluSp SINE Alu 1 298 -15 1696 157 0 60 chr10 12926736 12926860 -132662428 - AluJo SINE Alu -176 136 6 278 261 34 116 chr10 12926860 12926953 -132662335 - MIR SINE MIR -98 164 65 186 43 0 0 chr10 12927440 12927463 -132661825 + (TTTCC)n Simple_repeat Simple_repeat 4 26 0 180 0 0 0 chr10 12928489 12928509 -132660779 + (T)n Simple_repeat Simple_repeat 1 20 0 704 76 0 50 chr10 12929047 12929166 -132660122 - L1PB1 LINE L1 -3 6148 6036 495 296 40 25 chr10 12930490 12930689 -132658599 + MIR3 SINE MIR 1 202 -6 537 268 155 5 chr10 12931012 12931206 -132658082 - MIR SINE MIR -4 258 36 378 258 96 36 chr10 12931390 12931557 -132657731 + MIR SINE MIR 36 212 -50 1979 134 3 3 chr10 12931651 12931958 -132657330 + AluSx SINE Alu 2 308 -4 343 203 29 0 chr10 12932484 12932553 -132656735 - Tigger7 DNA MER2_type 0 2487 2417 1253 167 8 72 chr10 12932571 12932822 -132656466 - Tigger7 DNA MER2_type -466 267 33 1559 158 3 91 chr10 12932900 12933230 -132656058 + AluJb SINE Alu 1 301 -11 201 240 144 48 chr10 12934277 12934423 -132654865 + MIR SINE MIR 91 250 -12 528 137 0 0 chr10 12935319 12935392 -132653896 + AluS SINE Alu 2 74 -239 847 176 85 6 chr10 12936429 12936605 -132652683 + MIR SINE MIR 31 220 -42 219 314 177 8 chr10 12936838 12936962 -132652326 - L2 LINE L2 -2 3311 3167 1575 206 41 16 chr10 12938867 12939231 -132650057 - MLT1A2 LTR MaLR 0 374 2 1428 92 0 5 chr10 12939544 12939739 -132649549 - AluSq SINE Alu -20 293 100 275 148 0 16 chr10 12941036 12941097 -132648191 + (TCCC)n Simple_repeat Simple_repeat 3 62 0 3570 261 44 37 chr10 12943164 12943304 -132645984 + L2 LINE L2 1562 1700 -1614 248 0 0 30 chr10 12943304 12943337 -132645951 + (CAAAC)n Simple_repeat Simple_repeat 3 34 0 3570 261 44 37 chr10 12943337 12944411 -132644877 + L2 LINE L2 1700 2784 -530 503 255 78 31 chr10 12945451 12945643 -132643645 - MIR SINE MIR -59 203 3 212 204 23 0 chr10 12945681 12945725 -132643563 + L2 LINE L2 3226 3270 -2 476 289 64 13 chr10 12945749 12945905 -132643383 - MIR SINE MIR -18 244 81 807 148 22 15 chr10 12945912 12946047 -132643241 - AluJb SINE Alu -18 294 159 1865 123 27 7 chr10 12946235 12946535 -132642753 + AluSx SINE Alu 1 306 -6 395 245 0 82 chr10 12946536 12946634 -132642654 + L1MC4 LINE L1 6614 6703 -1339 324 308 22 0 chr10 12946567 12946658 -132642630 - L1MC4 LINE L1 -1336 6706 6614 * 389 255 0 43 chr10 12946674 12946768 -132642520 + L1MC4 LINE L1 6614 6703 -1339 182 328 17 0 chr10 12947088 12947146 -132642142 + L2 LINE L2 3246 3304 -9 2166 114 0 3 chr10 12948676 12948982 -132640306 + AluSx SINE Alu 1 305 -7 195 42 0 0 chr10 12949084 12949108 -132640180 + (TG)n Simple_repeat Simple_repeat 2 25 0 1917 206 51 2 chr10 12949125 12949558 -132639730 - L1MB1 LINE L1 -2 6166 5713 216 333 241 0 chr10 12949673 12949781 -132639507 + MIR SINE MIR 106 239 -23 195 125 18 54 chr10 12949826 12949882 -132639406 + CT-rich Low_complexity Low_complexity 3 56 0 270 136 0 0 chr10 12949996 12950040 -132639248 + (A)n Simple_repeat Simple_repeat 1 44 0 3368 168 20 54 chr10 12950161 12950390 -132638898 - L1MB7 LINE L1 -23 6161 5926 2058 112 10 0 chr10 12950390 12950686 -132638602 + AluSx SINE Alu 1 299 -13 3368 168 20 54 chr10 12950686 12951195 -132638093 - L1MB7 LINE L1 -258 5926 5448 410 206 22 0 chr10 12951271 12951363 -132637925 + AluJb SINE Alu 14 107 -205 796 159 0 23 chr10 12951685 12951817 -132637471 - FLAM_A SINE Alu -2 140 12 226 136 68 51 chr10 12951822 12951881 -132637407 - AluJo SINE Alu -160 142 83 1041 166 135 0 chr10 12953047 12953240 -132636048 + MER20 DNA MER1_type 1 219 0 2029 99 31 3 chr10 12954489 12954781 -132634507 + AluSx SINE Alu 1 300 -12 230 325 32 24 chr10 12955806 12955929 -132633359 - MIR3 SINE MIR -7 201 78 848 156 0 46 chr10 12956115 12956288 -132633000 + FRAM SINE Alu 2 166 -10 1204 72 63 5 chr10 12956735 12956942 -132632346 + AluSx SINE Alu 1 219 -93 285 105 0 0 chr10 12957058 12957096 -132632192 + Alu SINE Alu 255 292 -10 2387 230 61 8 chr10 12957127 12957766 -132631522 + L1M4 LINE L1 2366 3038 -3108 347 287 185 20 chr10 12958507 12958761 -132630527 + HAL1 LINE L1 982 1277 -1230 216 176 9 46 chr10 12958761 12958869 -132630419 + GA-rich Low_complexity Low_complexity 2 105 0 224 273 150 16 chr10 12959200 12959278 -132630010 - MIR SINE MIR -65 143 78 1917 146 3 0 chr10 12959278 12959579 -132629709 + AluJb SINE Alu 1 302 -10 224 273 150 16 chr10 12959579 12959625 -132629663 - MIR SINE MIR -130 78 40 623 188 182 7 chr10 12959930 12960084 -132629204 - MER5A DNA MER1_type -2 187 7 307 53 0 0 chr10 12960190 12960228 -132629060 - THE1A LTR MaLR 0 355 318 425 19 19 0 chr10 12960400 12960454 -132628834 + (TGGA)n Simple_repeat Simple_repeat 1 55 0 644 250 14 24 chr10 12961868 12962048 -132627240 + MER5A DNA MER1_type 4 181 -8 319 148 0 99 chr10 12962532 12962613 -132626675 - AluS SINE Alu 0 301 229 1829 100 7 43 chr10 12962714 12963038 -132626250 + AluSx SINE Alu 13 326 0 201 325 216 36 chr10 12963232 12963426 -132625862 + MIR SINE MIR 5 233 -29 1754 132 3 49 chr10 12964059 12964363 -132624925 - AluJb SINE Alu -22 290 1 828 123 0 0 chr10 12965352 12965474 -132623814 + AluSg/x SINE Alu 181 302 -10 269 256 68 60 chr10 12965782 12965899 -132623389 - MIR SINE MIR -26 236 119 522 225 11 112 chr10 12966118 12966231 -132623057 - MER5B DNA MER1_type -18 160 70 1718 170 0 31 chr10 12966231 12966549 -132622739 - AluJo SINE Alu -4 308 1 522 225 11 112 chr10 12966549 12966613 -132622675 - MER5B DNA MER1_type -108 70 1 1946 134 0 3 chr10 12967433 12967725 -132621563 - AluSx SINE Alu -11 301 11 1673 167 0 14 chr10 12968109 12968403 -132620885 - AluJb SINE Alu -22 290 1 2393 181 30 8 chr10 12969186 12969655 -132619633 - L1MB3 LINE L1 -1 6182 5704 293 319 26 17 chr10 12969788 12969904 -132619384 + MER5A DNA MER1_type 47 163 -26 223 250 62 83 chr10 12970192 12970336 -132618952 - MER91A DNA MER1_type 0 196 56 2269 68 0 13 chr10 12971050 12971357 -132617931 + AluY SINE Alu 1 303 -8 1986 130 0 3 chr10 12971438 12971731 -132617557 - AluSx SINE Alu -20 292 1 368 320 22 26 chr10 12971732 12971917 -132617371 - MIR SINE MIR -60 202 22 222 37 0 0 chr10 12971984 12972011 -132617277 + (GGA)n Simple_repeat Simple_repeat 1 27 0 1927 194 10 70 chr10 12973202 12973619 -132615669 + MLT2B2 LTR ERVL 3 394 -121 249 229 46 0 chr10 12973834 12973965 -132615323 + (CACAC)n Simple_repeat Simple_repeat 3 139 0 201 167 37 0 chr10 12973974 12974028 -132615260 + C-rich Low_complexity Low_complexity 1 56 0 214 77 0 0 chr10 12974098 12974124 -132615164 + (CA)n Simple_repeat Simple_repeat 2 27 0 346 281 0 22 chr10 12975040 12975218 -132614070 + (CATA)n Simple_repeat Simple_repeat 1 174 0 227 311 60 48 chr10 12975555 12975722 -132613566 + MIR SINE MIR 15 183 -79 692 241 77 19 chr10 12976396 12976603 -132612685 - MER20 DNA MER1_type 0 219 1 214 270 32 0 chr10 12976680 12976743 -132612545 + L2 LINE L2 3207 3271 -1 386 332 117 5 chr10 12977151 12977356 -132611932 + MIR SINE MIR 20 247 -15 276 239 60 0 chr10 12977560 12977627 -132611661 - MIR SINE MIR -136 126 56 2264 99 0 0 chr10 12977935 12978237 -132611051 - AluSq SINE Alu -1 312 11 225 176 162 27 chr10 12978557 12978631 -132610657 - Charlie6 DNA MER1_type -1301 2199 2116 2133 128 6 3 chr10 12981266 12981578 -132607710 - AluSq SINE Alu 0 313 1 1536 138 50 31 chr10 12981853 12982113 -132607175 - THE1B LTR MaLR -99 265 1 21 0 0 0 chr10 12982491 12982512 -132606776 + AT_rich Low_complexity Low_complexity 1 21 0 1150 106 0 0 chr10 12982626 12982777 -132606511 + AluSg/x SINE Alu 158 308 -4 1875 254 72 33 chr10 12983318 12983395 -132605893 + L1MDa LINE L1 21 94 -6446 201 74 0 0 chr10 12983395 12983422 -132605866 + (CA)n Simple_repeat Simple_repeat 2 28 0 1875 254 72 33 chr10 12983422 12984116 -132605172 + L1MDa LINE L1 94 1051 -5489 204 40 0 0 chr10 12984116 12984141 -132605147 + (CA)n Simple_repeat Simple_repeat 2 26 0 549 218 46 17 chr10 12984141 12984315 -132604973 + L1M4 LINE L1 4263 4441 -1705 304 135 27 54 chr10 12984325 12984399 -132604889 + L1M4 LINE L1 4377 4448 -1698 2167 218 59 52 chr10 12984401 12985175 -132604113 + L1M4 LINE L1 4377 5156 -990 275 103 0 0 chr10 12985639 12985678 -132603610 - MLT1K LTR MaLR -4 584 546 2047 132 4 0 chr10 12988352 12988656 -132600632 - AluSx SINE Alu 0 305 1 259 310 14 0 chr10 12989681 12989752 -132599536 - L2 LINE L2 -40 3232 3161 1160 119 5 60 chr10 12990877 12991062 -132598226 + AluSg/x SINE Alu 126 300 -10 275 261 43 22 chr10 12991599 12991691 -132597597 - MIR SINE MIR -92 170 77 2538 129 20 0 chr10 12993280 12993637 -132595651 + THE1B LTR MaLR 1 364 0 2322 110 0 0 chr10 12993967 12994267 -132595021 - AluSc SINE Alu -9 300 1 3431 69 0 2 chr10 12994293 12994730 -132594558 + L1PA10 LINE L1 5724 6159 -9 277 279 224 22 chr10 12995020 12995203 -132594085 + MLT1J LTR MaLR 292 511 0 1819 141 31 10 chr10 12995342 12995632 -132593656 + AluJb SINE Alu 1 296 -16 2211 120 3 13 chr10 12996595 12996904 -132592384 + AluSx SINE Alu 1 306 -6 183 80 0 0 chr10 12997030 12997055 -132592233 + (TG)n Simple_repeat Simple_repeat 2 26 0 2359 105 0 6 chr10 12997669 12997983 -132591305 + AluSx SINE Alu 1 312 0 1378 193 113 22 chr10 12998817 12999092 -132590196 - AluJo SINE Alu -12 300 1 2212 116 10 0 chr10 12999377 12999678 -132589610 + AluSx SINE Alu 1 304 -8 200 283 182 0 chr10 12999764 12999863 -132589425 - MIR SINE MIR -32 230 114 288 111 0 0 chr10 13000274 13000319 -132588969 + (CA)n Simple_repeat Simple_repeat 1 45 0 604 213 7 7 chr10 13000517 13000653 -132588635 - L1MA5 LINE L1 -4 6296 6161 1829 87 17 0 chr10 13000668 13000899 -132588389 - AluSx SINE Alu -77 235 1 293 188 78 0 chr10 13001819 13001883 -132587405 + Charlie3 DNA MER1_type 46 114 -2596 300 24 24 0 chr10 13001902 13001943 -132587345 - MER63 DNA MER1_type -1019 42 1 414 323 62 12 chr10 13001950 13002111 -132587177 + L2 LINE L2 1859 2027 -1287 3702 104 11 33 chr10 13002160 13002228 -132587060 + MER1A DNA MER1_type 1 69 -2631 2317 93 0 10 chr10 13002228 13002539 -132586749 + AluY SINE Alu 1 308 -3 3702 104 11 33 chr10 13002539 13003009 -132586279 + MER1A DNA MER1_type 69 527 0 1336 158 0 0 chr10 13004226 13004441 -132584847 + L1PA13 LINE L1 5936 6150 -13 1088 150 0 18 chr10 13004506 13004673 -132584615 - FRAM SINE Alu -1 165 2 225 36 0 0 chr10 13004875 13004903 -132584385 - MLT2B2 LTR ERVL -10 505 478 222 91 0 0 chr10 13004903 13004936 -132584352 + (TG)n Simple_repeat Simple_repeat 1 33 0 2398 89 0 0 chr10 13005011 13005303 -132583985 + AluY SINE Alu 2 293 -18 2037 149 10 0 chr10 13007483 13007784 -132581504 + AluSx SINE Alu 1 304 -8 769 183 23 0 chr10 13007804 13007935 -132581353 + AluJo SINE Alu 2 135 -177 29 47 0 0 chr10 13007935 13007978 -132581310 + AT_rich Low_complexity Low_complexity 1 43 0 1944 131 4 0 chr10 13007988 13008256 -132581032 + AluJo SINE Alu 23 291 -21 22 0 0 0 chr10 13008256 13008278 -132581010 + AT_rich Low_complexity Low_complexity 1 22 0 4272 105 42 63 chr10 13009573 13009659 -132579629 - LTR8A LTR ERV1 0 727 641 2293 105 0 0 chr10 13009659 13009954 -132579334 + AluSg SINE Alu 1 295 -15 4272 105 42 63 chr10 13009954 13010610 -132578678 - LTR8A LTR ERV1 -86 641 1 774 324 15 8 chr10 13010691 13010950 -132578338 + MIR SINE MIR 2 262 0 2232 91 44 0 chr10 13011003 13011299 -132577989 - AluSg SINE Alu -1 309 1 431 220 30 0 chr10 13011549 13011649 -132577639 - MER97b DNA MER1_type? -894 159 57 560 241 20 89 chr10 13011890 13011972 -132577316 + MER5A DNA MER1_type 1 87 -102 2366 94 7 0 chr10 13011972 13012279 -132577009 + AluSq SINE Alu 1 309 -4 560 241 20 89 chr10 13012279 13012399 -132576889 + MER5A DNA MER1_type 87 189 0 382 326 28 7 chr10 13012409 13012553 -132576735 + MIR SINE MIR 97 243 -19 1379 170 96 22 chr10 13012883 13013154 -132576134 + AluJo SINE Alu 1 291 -21 2536 70 0 10 chr10 13013159 13013472 -132575816 + AluY SINE Alu 1 310 -1 263 311 110 17 chr10 13013605 13013904 -132575384 + L2 LINE L2 1862 2188 -1126 2209 104 3 0 chr10 13014046 13014333 -132574955 - AluSx SINE Alu -24 288 1 2291 98 0 3 chr10 13015161 13015456 -132573832 - AluSg SINE Alu -16 294 1 2776 166 4 4 chr10 13015831 13016326 -132572962 + L1MB3 LINE L1 5648 6142 -41 3513 118 11 13 chr10 13016327 13016876 -132572412 + L1PA13 LINE L1 5616 6163 0 250 77 0 39 chr10 13016898 13016950 -132572338 + L1MB4 LINE L1 6128 6177 -3 2245 84 30 7 chr10 13016975 13017272 -132572016 + AluY SINE Alu 1 304 -7 765 265 57 5 chr10 13017802 13018013 -132571275 + MIR SINE MIR 41 262 0 1135 111 52 0 chr10 13018020 13018173 -132571115 - AluSg/x SINE Alu -15 297 137 208 318 111 74 chr10 13018267 13018647 -132570641 + L2 LINE L2 2877 3270 -2 2320 97 10 0 chr10 13018647 13018945 -132570343 + AluSx SINE Alu 1 301 -11 2261 124 0 9 chr10 13019404 13019719 -132569569 - AluJo SINE Alu 0 312 1 221 326 0 31 chr10 13020353 13020451 -132568837 + GA-rich Low_complexity Low_complexity 3 97 0 231 114 0 0 chr10 13020513 13020548 -132568740 + (CACG)n Simple_repeat Simple_repeat 1 35 0 2105 135 3 0 chr10 13020641 13020952 -132568336 + AluSx SINE Alu 1 312 0 331 195 49 0 chr10 13021080 13021162 -132568126 + L1ME4a LINE L1 5957 6042 -79 1743 179 0 19 chr10 13023096 13023403 -132565885 + AluJb SINE Alu 1 301 -11 832 157 31 0 chr10 13023444 13023603 -132565685 + L1MD1 LINE L1 6079 6242 0 2000 155 0 0 chr10 13024005 13024301 -132564987 + AluSx SINE Alu 1 296 -16 1736 171 0 17 chr10 13024873 13025032 -132564256 - AluJo SINE Alu -30 282 129 1996 107 0 4 chr10 13025032 13025295 -132563993 - AluY SINE Alu -12 299 38 1736 171 0 17 chr10 13025295 13025422 -132563866 - AluJo SINE Alu -183 129 1 197 138 0 0 chr10 13025426 13025455 -132563833 - MIR SINE MIR -62 146 118 229 287 103 0 chr10 13025579 13025695 -132563593 + MIR SINE MIR 19 151 -69 2279 120 0 0 chr10 13025803 13026112 -132563176 + AluSx SINE Alu 1 309 -3 2554 64 0 0 chr10 13026626 13026923 -132562365 - AluY SINE Alu -14 297 1 1862 133 28 88 chr10 13027349 13027748 -132561540 - THE1C LTR MaLR 0 375 1 2158 143 0 7 chr10 13028019 13028326 -132560962 + AluSx SINE Alu 1 305 -7 1060 139 0 24 chr10 13028597 13028763 -132560525 + FRAM SINE Alu 1 162 -4 2335 102 0 7 chr10 13028992 13029297 -132559991 + AluSc SINE Alu 1 303 -6 2423 99 0 0 chr10 13029741 13030043 -132559245 - AluSc SINE Alu -7 302 1 1871 159 0 22 chr10 13030585 13030724 -132558564 + AluJo SINE Alu 1 142 -170 2065 135 16 0 chr10 13030724 13031027 -132558261 + AluSg SINE Alu 1 308 -2 1871 159 0 22 chr10 13031027 13031201 -132558087 + AluJo SINE Alu 142 307 -5 2325 111 0 0 chr10 13032273 13032579 -132556709 + AluSx SINE Alu 1 306 -6 1793 148 3 55 chr10 13032718 13033039 -132556249 + AluJo SINE Alu 1 294 -18 322 326 65 35 chr10 13033092 13033322 -132555966 + L2 LINE L2 3077 3313 0 1258 266 22 50 chr10 13033579 13033646 -132555642 - L1MC4a LINE L1 -1811 5997 5930 2244 94 17 0 chr10 13033646 13033944 -132555344 - AluSc SINE Alu -6 303 1 1258 266 22 50 chr10 13033944 13034046 -132555242 - L1MC4a LINE L1 -1878 5930 5827 2028 119 0 0 chr10 13034046 13034339 -132554949 - AluSx SINE Alu -17 295 3 1258 266 22 50 chr10 13034339 13034623 -132554665 - L1MC4a LINE L1 -1981 5827 5556 1324 120 57 0 chr10 13034659 13034868 -132554420 - AluJo SINE Alu -6 306 86 215 385 0 0 chr10 13035522 13035587 -132553701 + L3 LINE CR1 325 389 -1188 591 201 101 22 chr10 13035714 13035893 -132553395 + L1ME3 LINE L1 5672 5864 -298 433 169 0 0 chr10 13035904 13035975 -132553313 + L1ME3 LINE L1 5914 5984 -178 1698 158 0 7 chr10 13035976 13036255 -132553033 + AluJb SINE Alu 1 277 -35 1752 159 3 3 chr10 13036690 13036979 -132552309 + AluJo SINE Alu 4 292 -20 2141 109 0 0 chr10 13036988 13037290 -132551998 + AluY SINE Alu 1 302 -9 593 269 185 40 chr10 13037445 13037769 -132551519 + L3 LINE CR1 609 979 -598 2400 168 32 42 chr10 13037816 13037962 -132551326 + L1MB3 LINE L1 5681 5827 -356 2098 120 0 7 chr10 13037962 13038271 -132551017 + AluSg SINE Alu 1 307 -3 2400 168 32 42 chr10 13038271 13038582 -132550706 + L1MB3 LINE L1 5827 6135 -48 1944 102 62 0 chr10 13038582 13038856 -132550432 + AluSg SINE Alu 1 291 -19 2400 168 32 42 chr10 13038856 13038897 -132550391 + L1MB3 LINE L1 6135 6175 -8 307 234 40 8 chr10 13038919 13039043 -132550245 + (TA)n Simple_repeat Simple_repeat 2 129 0 24 67 0 0 chr10 13039134 13039179 -132550109 + AT_rich Low_complexity Low_complexity 1 45 0 180 216 227 23 chr10 13039224 13039312 -132549976 + L3 LINE CR1 964 1069 -508 192 40 0 0 chr10 13039658 13039683 -132549605 + (CA)n Simple_repeat Simple_repeat 2 26 0 192 329 0 47 chr10 13041052 13041137 -132548151 - MIR3 SINE MIR -9 199 119 478 150 30 0 chr10 13041257 13041357 -132547931 + CT-rich Low_complexity Low_complexity 3 105 0 1866 131 25 0 chr10 13041443 13041726 -132547562 - AluSx SINE Alu -22 290 1 595 122 10 0 chr10 13041737 13041835 -132547453 - L1MA9 LINE L1 0 6312 6214 233 189 75 0 chr10 13041811 13041864 -132547424 - L1MA8 LINE L1 -27 6264 6208 * 748 208 0 6 chr10 13041841 13041996 -132547292 - L1MA9 LINE L1 -30 6261 6115 185 247 135 45 chr10 13042025 13042114 -132547174 - MIR SINE MIR -163 99 3 501 260 89 6 chr10 13042403 13042572 -132546716 - MIR SINE MIR 0 262 80 752 142 71 8 chr10 13042957 13043084 -132546204 + AluJ SINE Alu 2 136 -176 763 142 71 0 chr10 13043130 13043257 -132546031 + FLAM_C SINE Alu 3 138 -5 1894 127 3 23 chr10 13043310 13043617 -132545671 + AluSq SINE Alu 12 312 -1 648 206 0 0 chr10 13043618 13043720 -132545568 + AluJo/FRAM SINE Alu 131 232 -80 21 57 0 0 chr10 13043721 13043756 -132545532 + AT_rich Low_complexity Low_complexity 1 35 0 1342 234 4 0 chr10 13043864 13044142 -132545146 - AluJo SINE Alu -33 279 1 4259 89 4 0 chr10 13044913 13045465 -132543823 + MER41A LTR ERV1 1 554 0 5288 120 28 68 chr10 13046226 13047167 -132542121 + MER4D LTR ERV1 1 903 0 4190 78 7 26 chr10 13047240 13047632 -132541656 + MER41A LTR ERV1 1 380 -174 2123 123 3 0 chr10 13047632 13047941 -132541347 + AluSq SINE Alu 1 310 -3 4190 78 7 26 chr10 13047941 13048113 -132541175 + MER41A LTR ERV1 380 554 0 232 169 0 72 chr10 13048547 13048630 -132540658 + A-rich Low_complexity Low_complexity 3 79 0 2220 96 0 0 chr10 13049060 13049362 -132539926 - AluY SINE Alu -9 302 1 1067 141 80 5 chr10 13049746 13049945 -132539343 - AluSg/x SINE Alu -13 297 84 1094 215 62 4 chr10 13050315 13050589 -132538699 - AluSx SINE Alu -7 305 16 1180 194 158 30 chr10 13050604 13050638 -132538650 - MER39 LTR ERV1 -77 630 602 1673 171 3 7 chr10 13050638 13050937 -132538351 + AluJb SINE Alu 1 298 -14 1180 194 158 30 chr10 13050937 13051231 -132538057 - MER39 LTR ERV1 -105 602 260 441 288 72 8 chr10 13051208 13051333 -132537955 - MER39 LTR ERV1 -574 133 1 * 205 300 75 25 chr10 13051351 13051431 -132537857 + L2 LINE L2 3153 3236 -36 255 217 67 0 chr10 13051446 13051506 -132537782 - L1ME1 LINE L1 -5 6161 6098 2167 100 0 10 chr10 13051547 13051847 -132537441 + AluSx SINE Alu 1 297 -15 2250 113 33 36 chr10 13052019 13052382 -132536906 + THE1B LTR MaLR 1 362 -2 1359 167 23 0 chr10 13053974 13054195 -132535093 + MER68 LTR ERV1 43 268 -294 2436 177 16 5 chr10 13054198 13054638 -132534650 + L1MC1 LINE L1 5880 6324 -9 1960 108 0 11 chr10 13054639 13054918 -132534370 + AluSx SINE Alu 1 276 -36 400 127 13 13 chr10 13054918 13054997 -132534291 + (TAGA)n Simple_repeat Simple_repeat 1 79 0 1265 214 30 24 chr10 13055012 13055307 -132533981 + MER68 LTR ERV1 257 553 -9 2202 98 6 16 chr10 13056883 13057199 -132532089 - AluSq SINE Alu 0 313 1 890 170 0 0 chr10 13057997 13058144 -132531144 + FRAM SINE Alu 1 144 -32 671 189 6 17 chr10 13059425 13059605 -132529683 + (TTCA)n Simple_repeat Simple_repeat 3 180 0 398 188 10 0 chr10 13059617 13059713 -132529575 + (TTCA)n Simple_repeat Simple_repeat 2 98 0 23 0 0 0 chr10 13061028 13061051 -132528237 + AT_rich Low_complexity Low_complexity 1 23 0 1868 128 4 0 chr10 13061092 13061366 -132527922 + AluSx SINE Alu 13 287 -25 252 0 0 0 chr10 13061366 13061394 -132527894 + (CAT)n Simple_repeat Simple_repeat 2 29 0 2201 121 0 0 chr10 13062490 13062796 -132526492 + AluSx SINE Alu 1 306 -6 238 261 111 25 chr10 13062830 13063029 -132526259 - L2 LINE L2 -218 3054 2839 1638 202 38 6 chr10 13063092 13063434 -132525854 - MLT1A1 LTR MaLR -12 353 1 229 391 38 11 chr10 13063434 13063695 -132525593 - L2 LINE L2 -526 2788 2521 1648 48 0 19 chr10 13063892 13064101 -132525187 + L1PA7 LINE L1 5940 6144 -10 2213 107 0 0 chr10 13064124 13064462 -132524826 + AluSg SINE Alu 1 338 0 274 266 63 0 chr10 13064702 13064781 -132524507 + LTR33 LTR ERVL 134 217 -304 239 273 30 10 chr10 13064899 13064998 -132524290 + LTR33 LTR ERVL 417 517 -4 1501 143 11 40 chr10 13065042 13065147 -132524141 + AluJo SINE Alu 31 138 -174 1938 141 0 0 chr10 13065147 13065446 -132523842 + AluSx SINE Alu 1 299 -13 1501 143 11 40 chr10 13065446 13065612 -132523676 + AluJo SINE Alu 138 294 -18 2083 110 7 0 chr10 13065617 13065918 -132523370 + AluSp SINE Alu 1 303 -10 328 296 78 115 chr10 13066374 13066580 -132522708 - L2 LINE L2 0 3272 3089 2057 135 0 0 chr10 13066580 13066892 -132522396 + AluSx SINE Alu 1 312 0 328 296 78 115 chr10 13066892 13067110 -132522178 - L2 LINE L2 -183 3089 2864 316 252 114 32 chr10 13067149 13067272 -132522016 + MER94 DNA DNA 1 133 -1 983 165 0 0 chr10 13067335 13067499 -132521789 - AluJb SINE Alu -12 300 137 325 319 48 82 chr10 13067500 13068040 -132521248 - L2 LINE L2 -567 2747 2226 1571 185 10 7 chr10 13068628 13068930 -132520358 - AluJo SINE Alu -9 303 1 402 143 43 0 chr10 13069292 13069362 -132519926 - AluJ/FLAM SINE Alu -229 73 1 2237 99 0 0 chr10 13069622 13069924 -132519364 + AluSx SINE Alu 1 302 -10 1995 107 29 0 chr10 13070486 13070767 -132518521 + AluSx SINE Alu 1 289 -23 1511 132 0 0 chr10 13070852 13071079 -132518209 + AluSg/x SINE Alu 82 308 -2 2161 100 3 0 chr10 13072333 13072633 -132516655 + AluY SINE Alu 1 301 -10 339 25 0 0 chr10 13072919 13072959 -132516329 + (TG)n Simple_repeat Simple_repeat 1 40 0 196 263 0 79 chr10 13073470 13073546 -132515742 + L3 LINE CR1 1496 1565 -12 1601 155 3 25 chr10 13073981 13074265 -132515023 - AluJo SINE Alu -22 290 13 2074 99 17 13 chr10 13074499 13074801 -132514487 + AluSx SINE Alu 1 303 -9 230 224 0 0 chr10 13075294 13075343 -132513945 + CT-rich Low_complexity Low_complexity 2 50 0 569 294 162 5 chr10 13075421 13075618 -132513670 - MIR SINE MIR -2 260 33 805 141 0 0 chr10 13076675 13076796 -132512492 + AluJb SINE Alu 182 302 -10 2169 87 0 35 chr10 13077000 13077310 -132511978 + AluSq SINE Alu 1 299 -14 459 288 50 45 chr10 13078802 13079024 -132510264 + MIR SINE MIR 40 262 0 386 308 117 40 chr10 13079495 13079768 -132509520 + MLT1J1 LTR MaLR 100 393 -53 589 82 20 20 chr10 13080313 13080411 -132508877 + AluSg/x SINE Alu 163 260 -52 180 125 0 0 chr10 13080725 13080757 -132508531 + (TCTA)n Simple_repeat Simple_repeat 1 32 0 525 16 0 0 chr10 13080783 13080845 -132508443 + (TC)n Simple_repeat Simple_repeat 1 62 0 1050 214 20 12 chr10 13081590 13081838 -132507450 + AluJo SINE Alu 1 250 -62 1890 90 8 0 chr10 13081973 13082239 -132507049 - AluY SINE Alu -43 268 1 1244 321 141 12 chr10 13082244 13082963 -132506325 - L3 LINE CR1 -704 873 63 497 258 65 73 chr10 13083039 13083287 -132506001 - MIR SINE MIR -12 250 5 213 175 0 0 chr10 13085270 13085310 -132503978 + L2 LINE L2 3274 3313 0 1592 122 3 90 chr10 13086329 13086650 -132502638 + AluSq SINE Alu 1 293 -20 203 261 0 0 chr10 13087022 13087068 -132502220 + A-rich Low_complexity Low_complexity 3 48 0 243 220 68 0 chr10 13087832 13087891 -132501397 - MIR SINE MIR -71 191 129 195 377 37 33 chr10 13087904 13088098 -132501190 + L2 LINE L2 2620 2817 -497 4153 155 32 24 chr10 13088098 13088877 -132500411 - LTR1 LTR ERV1 0 785 1 195 377 37 33 chr10 13088877 13088926 -132500362 + L2 LINE L2 2817 2864 -450 2279 99 10 0 chr10 13089133 13089427 -132499861 - AluSx SINE Alu -15 297 1 482 136 37 12 chr10 13089609 13089690 -132499598 - MER105 DNA DNA -1 203 121 841 161 6 31 chr10 13089808 13089969 -132499319 + AluJb SINE Alu 126 282 -30 215 224 0 0 chr10 13089975 13090024 -132499264 + GA-rich Low_complexity Low_complexity 3 51 0 2190 125 3 0 chr10 13090146 13090442 -132498846 + AluSq SINE Alu 1 297 -16 186 350 10 20 chr10 13090916 13091016 -132498272 + MIR SINE MIR 164 262 0 193 269 0 0 chr10 13091159 13091211 -132498077 - L2 LINE L2 -218 3054 3003 3691 132 9 0 chr10 13091286 13091810 -132497478 - MER1A DNA MER1_type 0 529 1 414 316 35 12 chr10 13091850 13092021 -132497267 - L2 LINE L2 -1289 2025 1851 712 202 34 51 chr10 13092021 13092199 -132497089 + MER63B DNA MER1_type 1 175 -261 1407 209 16 32 chr10 13092568 13092775 -132496513 - MER82 DNA MER2_type -145 508 306 2421 111 16 14 chr10 13092775 13093146 -132496142 + THE1C LTR MaLR 1 372 -3 1407 209 16 32 chr10 13093146 13093253 -132496035 - MER82 DNA MER2_type -347 306 199 7143 122 12 35 chr10 13093255 13094354 -132494934 + HSMAR2 DNA Mariner 3 1077 -225 2142 90 21 0 chr10 13094354 13094643 -132494645 + AluSc SINE Alu 1 295 -14 7143 122 12 35 chr10 13094643 13094687 -132494601 + HSMAR2 DNA Mariner 1077 1120 -182 2062 127 0 0 chr10 13095189 13095496 -132493792 - AluSx SINE Alu 0 307 1 2116 82 7 41 chr10 13095637 13095954 -132493334 - AluSq SINE Alu 0 307 1 310 183 42 28 chr10 13096377 13096448 -132492840 - L1MC3 LINE L1 -607 7178 7107 357 110 0 122 chr10 13096604 13096656 -132492632 - MLT2C2 LTR ERVL -8 456 416 528 56 0 0 chr10 13096656 13096728 -132492560 + (TCTA)n Simple_repeat Simple_repeat 3 74 0 357 110 0 122 chr10 13096728 13096757 -132492531 - MLT2C2 LTR ERVL -48 416 385 215 61 30 0 chr10 13096767 13096800 -132492488 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 462 308 30 21 chr10 13096802 13097036 -132492252 - HAL1 LINE L1 -864 1643 1408 418 72 78 24 chr10 13097125 13097291 -132491997 + (TA)n Simple_repeat Simple_repeat 1 175 0 462 73 104 9 chr10 13097310 13097736 -132491552 + (TA)n Simple_repeat Simple_repeat 1 466 0 377 300 52 47 chr10 13097867 13097928 -132491360 - MIR SINE MIR -56 206 147 1863 170 0 0 chr10 13097928 13098228 -132491060 - AluJo SINE Alu -12 300 1 377 300 52 47 chr10 13098228 13098359 -132490929 - MIR SINE MIR -115 147 16 2071 122 7 0 chr10 13098573 13098867 -132490421 - AluSx SINE Alu -11 301 6 198 0 0 0 chr10 13099784 13099806 -132489482 + (C)n Simple_repeat Simple_repeat 1 22 0 182 257 9 0 chr10 13100253 13100358 -132488930 + (CA)n Simple_repeat Simple_repeat 2 107 0 469 235 6 6 chr10 13100425 13100595 -132488693 + (CA)n Simple_repeat Simple_repeat 2 171 0 492 297 46 14 chr10 13101722 13101941 -132487347 - MIR SINE MIR -1 261 36 1545 112 9 9 chr10 13102251 13102475 -132486813 + AluSq SINE Alu 1 224 -89 511 289 129 4 chr10 13103546 13103778 -132485510 - MIR SINE MIR 0 262 2 2215 99 3 13 chr10 13104188 13104491 -132484797 - AluSc SINE Alu -9 300 1 2133 130 0 0 chr10 13104578 13104877 -132484411 + AluSx SINE Alu 1 299 -13 458 71 0 192 chr10 13105284 13105383 -132483905 + MADE1 DNA Mariner 1 80 0 5624 150 12 2 chr10 13105610 13107312 -132481976 - L1PB1 LINE L1 -161 5990 4270 764 114 9 9 chr10 13107514 13107628 -132481660 + FLAM_C SINE Alu 2 115 -18 2285 94 7 0 chr10 13108159 13108456 -132480832 - AluSc SINE Alu -10 299 1 1520 166 43 17 chr10 13109117 13109418 -132479870 + AluJo SINE Alu 1 309 -3 536 229 92 52 chr10 13109778 13110166 -132479122 + L1M4 LINE L1 4211 4582 -1564 1641 163 45 0 chr10 13110166 13110454 -132478834 + AluSq SINE Alu 1 301 -12 536 229 92 52 chr10 13110454 13110680 -132478608 + L1M4 LINE L1 4582 4798 -1348 2152 119 0 7 chr10 13110680 13110974 -132478314 + AluSx SINE Alu 1 292 -20 536 229 92 52 chr10 13110974 13111124 -132478164 + L1M4 LINE L1 4798 5192 -954 2374 94 0 3 chr10 13111136 13111445 -132477843 + AluSg SINE Alu 1 308 -2 1139 187 113 14 chr10 13111451 13111734 -132477554 - L1ME LINE L1 -426 5740 5430 427 182 26 0 chr10 13111782 13111859 -132477429 - L1MC2 LINE L1 -32 6312 6234 365 138 0 0 chr10 13112627 13112685 -132476603 + MER53 DNA DNA 9 66 -123 231 170 64 0 chr10 13113411 13113458 -132475830 - L2 LINE L2 0 3272 3223 378 282 147 6 chr10 13113735 13113898 -132475390 + MER5A DNA MER1_type 4 189 0 464 303 27 21 chr10 13113906 13114094 -132475194 - MER5A DNA MER1_type 0 189 1 189 0 0 0 chr10 13115125 13115146 -132474142 + (A)n Simple_repeat Simple_repeat 1 21 0 432 248 30 15 chr10 13115181 13115314 -132473974 + HAL1 LINE L1 2036 2170 -337 238 250 43 11 chr10 13115349 13115441 -132473847 + HAL1 LINE L1 2245 2339 -168 2440 92 3 0 chr10 13115450 13115754 -132473534 + AluSx SINE Alu 1 305 -7 1977 269 105 3 chr10 13115943 13116627 -132472661 + L2 LINE L2 2216 2969 -345 2226 101 0 3 chr10 13116631 13116954 -132472334 - AluSq SINE Alu 0 313 1 554 117 11 21 chr10 13117425 13117519 -132471769 - FRAM SINE Alu -10 166 74 1633 134 4 4 chr10 13118097 13118335 -132470953 + AluSx SINE Alu 30 267 -45 2129 31 15 11 chr10 13118339 13118600 -132470688 + L1PA5 LINE L1 5893 6154 0 247 303 44 3 chr10 13118959 13119093 -132470195 + MIR SINE MIR 57 201 -7 216 234 125 0 chr10 13119753 13119817 -132469471 - MIR SINE MIR -79 183 112 2420 73 3 13 chr10 13119881 13120194 -132469094 - AluY SINE Alu -1 310 1 1347 239 30 18 chr10 13121855 13122218 -132467070 + LTR10C LTR ERV1 188 479 -26 283 133 0 0 chr10 13122457 13122502 -132466786 + L2 LINE L2 3226 3270 -2 379 254 85 38 chr10 13122782 13123019 -132466269 - L2 LINE L2 -290 3023 2764 2094 128 7 0 chr10 13123212 13123516 -132465772 - AluSg SINE Alu -4 306 1 199 280 43 21 chr10 13123692 13123785 -132465503 + L3 LINE CR1 1065 1159 -418 1910 145 0 7 chr10 13124083 13124380 -132464908 - AluJo SINE Alu -17 295 1 315 237 41 62 chr10 13125045 13125142 -132464146 - HAL1 LINE L1 -1 2506 2412 305 297 51 0 chr10 13126301 13126419 -132462869 + MIR SINE MIR 57 180 -82 2130 138 0 0 chr10 13126797 13127095 -132462193 + AluSx SINE Alu 1 298 -14 2840 226 62 35 chr10 13127378 13128342 -132460946 - L1ME1 LINE L1 -5 6161 5170 1820 210 32 22 chr10 13128333 13128400 -132460888 - L1MB8 LINE L1 -1 6177 6112 * 2218 98 7 3 chr10 13128400 13128695 -132460593 - AluSq SINE Alu -17 296 1 1820 210 32 22 chr10 13128695 13129088 -132460200 - L1MB8 LINE L1 -66 6112 5712 208 283 170 9 chr10 13132018 13132124 -132457164 + L2 LINE L2 3142 3264 -8 1478 205 27 27 chr10 13132598 13132969 -132456319 + MER93b LTR ERV1 1 371 -2 720 186 161 12 chr10 13133263 13133424 -132455864 - MER45C DNA AcHobo 0 953 769 321 26 0 0 chr10 13134762 13134800 -132454488 + (CA)n Simple_repeat Simple_repeat 2 39 0 2139 104 3 0 chr10 13134954 13135253 -132454035 + AluY SINE Alu 3 302 -9 223 333 130 34 chr10 13135887 13136094 -132453194 - L2 LINE L2 -3 3269 3043 1838 127 36 7 chr10 13136931 13137239 -132452049 + AluSx SINE Alu 1 316 0 508 173 19 10 chr10 13137769 13137873 -132451415 + FLAM_C SINE Alu 4 108 -35 281 244 355 23 chr10 13138097 13138269 -132451019 - MIR SINE MIR -33 229 1 1944 113 0 20 chr10 13139235 13139537 -132449751 - AluSx SINE Alu -16 296 1 183 80 0 0 chr10 13140278 13140303 -132448985 + (TG)n Simple_repeat Simple_repeat 1 25 0 295 293 130 51 chr10 13140647 13140826 -132448462 - L2 LINE L2 -5 3308 3108 1562 166 32 7 chr10 13140826 13141104 -132448184 + AluJo SINE Alu 1 285 -27 295 293 130 51 chr10 13141104 13141139 -132448149 - L2 LINE L2 -205 3108 3077 3297 154 11 9 chr10 13141622 13142186 -132447102 - L1PB4 LINE L1 0 6156 5592 340 106 0 61 chr10 13142459 13142525 -132446763 - Alu SINE Alu -1 299 238 374 77 0 0 chr10 13142656 13142708 -132446580 + Alu SINE Alu 248 299 -1 2340 134 64 43 chr10 13143038 13143457 -132445831 - MSTC LTR MaLR 0 428 1 656 283 23 12 chr10 13144972 13145145 -132444143 + MER5B DNA MER1_type 1 175 -3 1985 167 123 5 chr10 13145146 13145529 -132443759 - MSTA LTR MaLR 0 428 1 384 316 81 0 chr10 13146116 13146252 -132443036 - MIR3 SINE MIR -6 202 56 1376 160 0 13 chr10 13146387 13146618 -132442670 + AluJb SINE Alu 78 305 -7 239 343 59 10 chr10 13147021 13147123 -132442165 - MIR SINE MIR -64 144 38 2191 86 0 0 chr10 13147246 13147526 -132441762 + AluSc SINE Alu 1 280 -29 279 0 0 0 chr10 13147529 13147560 -132441728 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 503 157 139 0 chr10 13147615 13147730 -132441558 + MER105 DNA DNA 17 147 -57 2196 106 7 0 chr10 13148032 13148335 -132440953 + AluSq SINE Alu 1 305 -8 1875 122 10 22 chr10 13148342 13148653 -132440635 + AluSg SINE Alu 3 309 -1 509 333 30 14 chr10 13148771 13149011 -132440277 - MIR SINE MIR -2 260 18 260 306 37 37 chr10 13150013 13150121 -132439167 + MLT1K LTR MaLR 481 588 0 3059 140 32 45 chr10 13151298 13151580 -132437708 - MER1A DNA MER1_type -2173 527 254 2026 137 0 0 chr10 13151580 13151879 -132437409 - AluSx SINE Alu -13 299 1 3059 140 32 45 chr10 13151879 13152130 -132437158 - MER1A DNA MER1_type -2446 254 1 2095 116 0 3 chr10 13152179 13152490 -132436798 + AluSg SINE Alu 1 310 0 401 305 34 99 chr10 13152861 13153123 -132436165 - L3 LINE CR1 -863 714 470 217 236 109 0 chr10 13153130 13153185 -132436103 - L2 LINE L2 -4 3268 3208 1997 133 3 0 chr10 13153408 13153717 -132435571 - AluSx SINE Alu -2 310 1 1803 168 13 7 chr10 13153830 13154140 -132435148 - AluJb SINE Alu 0 312 1 390 148 0 0 chr10 13154211 13154272 -132435016 + AluS SINE Alu 1 61 -247 1821 85 4 31 chr10 13154578 13154836 -132434452 - AluSc SINE Alu -58 251 1 1146 161 57 0 chr10 13155200 13155411 -132433877 - L1PB4 LINE L1 0 6156 5934 1789 115 3 49 chr10 13155510 13155814 -132433474 + AluSx SINE Alu 7 296 -16 472 303 29 111 chr10 13156034 13156377 -132432911 + L2 LINE L2 2957 3271 -1 773 196 25 6 chr10 13156384 13156547 -132432741 + FRAM SINE Alu 1 166 0 684 0 0 0 chr10 13156673 13156749 -132432539 + (CTTAT)n Simple_repeat Simple_repeat 5 80 0 1684 151 22 7 chr10 13156754 13157032 -132432256 - AluSx SINE Alu -30 282 1 374 0 22 0 chr10 13157086 13157132 -132432156 + (TTCA)n Simple_repeat Simple_repeat 2 48 0 1306 127 25 118 chr10 13157906 13158221 -132431067 + AluYb8 SINE Alu 1 286 -32 428 0 19 0 chr10 13158222 13158274 -132431014 + (CAAA)n Simple_repeat Simple_repeat 2 54 0 204 40 0 0 chr10 13158331 13158356 -132430932 + (T)n Simple_repeat Simple_repeat 1 25 0 798 156 0 84 chr10 13158894 13159048 -132430240 - FRAM SINE Alu -42 134 1 1002 232 119 55 chr10 13159738 13160173 -132429115 + MLT2B1 LTR ERVL 2 464 -56 1653 151 0 70 chr10 13160178 13160490 -132428798 + AluJo SINE Alu 6 295 -17 2028 107 0 3 chr10 13160490 13160778 -132428510 + AluSc SINE Alu 19 306 -3 231 156 44 0 chr10 13160813 13160858 -132428430 + MLT2B1 LTR ERVL 462 508 -12 251 252 36 63 chr10 13160956 13161067 -132428221 - MIR3 SINE MIR -32 176 69 1955 60 0 4 chr10 13161421 13161672 -132427616 - AluY SINE Alu -14 297 48 2175 110 0 3 chr10 13161897 13162206 -132427082 + AluSq SINE Alu 1 308 -5 1916 75 11 19 chr10 13162490 13162757 -132426531 + AluY SINE Alu 10 274 -37 1198 153 13 55 chr10 13162898 13163134 -132426154 - AluJo SINE Alu -13 299 74 353 231 74 116 chr10 13163646 13163767 -132425521 + MER5B DNA MER1_type 63 178 0 237 291 23 0 chr10 13164931 13165017 -132424271 - L1MC4 LINE L1 -1341 6701 6614 * 282 233 0 47 chr10 13164941 13165027 -132424261 + L1MC4 LINE L1 6614 6695 -1347 282 56 0 0 chr10 13165027 13165063 -132424225 + (TG)n Simple_repeat Simple_repeat 2 37 0 193 214 0 29 chr10 13165079 13165149 -132424139 + (CATATA)n Simple_repeat Simple_repeat 3 70 0 1709 131 0 40 chr10 13165174 13165471 -132423817 - AluJb SINE Alu -27 285 1 1659 162 3 29 chr10 13166375 13166683 -132422605 - AluJo SINE Alu -12 300 1 236 264 14 14 chr10 13166700 13166772 -132422516 + L2 LINE L2 3239 3310 -3 410 271 50 9 chr10 13166894 13167023 -132422265 - MIR3 SINE MIR 0 208 74 1867 194 52 2 chr10 13167319 13167753 -132421535 + MER89 LTR ERV1 3 558 -1 2185 79 3 3 chr10 13167859 13168149 -132421139 - AluSg SINE Alu -20 290 1 247 295 0 0 chr10 13168825 13168886 -132420402 + MIR SINE MIR 185 245 -17 290 299 22 51 chr10 13169033 13169170 -132420118 + L2 LINE L2 2951 3083 -189 970 185 67 0 chr10 13169177 13169355 -132419933 - MER58A DNA MER1_type 0 224 35 2212 100 0 0 chr10 13169472 13169771 -132419517 + AluSq SINE Alu 9 307 -6 414 103 0 0 chr10 13169772 13169840 -132419448 + L1PB3 LINE L1 6080 6147 -7 1892 83 8 4 chr10 13170051 13170303 -132418985 + AluSx SINE Alu 1 253 -59 2239 105 0 0 chr10 13171216 13171520 -132417768 + AluSx SINE Alu 1 304 -8 887 213 5 35 chr10 13221756 13221958 -132367330 - AluJo SINE Alu -116 196 1 2017 111 0 97 chr10 13221987 13222123 -132367165 + AluSc SINE Alu 1 149 -160 2279 107 0 0 chr10 13222123 13222414 -132366874 + AluSg SINE Alu 1 291 -19 2017 111 0 97 chr10 13222414 13222619 -132366669 + AluSc SINE Alu 149 309 0 462 267 47 88 chr10 13222624 13222920 -132366368 + L2 LINE L2 3030 3313 0 2182 105 14 0 chr10 13223456 13223741 -132365547 - AluSx SINE Alu -16 296 8 1719 182 0 0 chr10 13223892 13224172 -132365116 + AluJb SINE Alu 1 280 -32 189 0 0 0 chr10 13224175 13224196 -132365092 + (GGGGA)n Simple_repeat Simple_repeat 2 22 0 234 0 0 0 chr10 13225674 13225700 -132363588 + (CGGA)n Simple_repeat Simple_repeat 3 28 0 396 59 0 0 chr10 13225702 13225753 -132363535 + (TAGA)n Simple_repeat Simple_repeat 3 53 0 911 185 212 79 chr10 13225947 13226098 -132363190 + MLT1A2 LTR MaLR 1 131 -243 2300 93 10 7 chr10 13226098 13226400 -132362888 + AluSc SINE Alu 1 303 -6 911 185 212 79 chr10 13226400 13226578 -132362710 + MLT1A2 LTR MaLR 131 374 0 2430 216 67 21 chr10 13226918 13227483 -132361805 + MLT1E LTR MaLR 1 591 -2 217 224 20 0 chr10 13227777 13227826 -132361462 + MER5B DNA MER1_type 128 177 -1 299 279 87 10 chr10 13228840 13228944 -132360344 - L2 LINE L2 -25 3247 3136 408 195 11 0 chr10 13229084 13229171 -132360117 + L1MB2 LINE L1 6068 6155 -16 696 186 103 44 chr10 13229501 13229705 -132359583 - L1MB7 LINE L1 -16 6168 5953 * 1164 178 84 41 chr10 13229681 13230024 -132359264 - L1M4 LINE L1 -4960 1582 1225 731 325 40 8 chr10 13230051 13230516 -132358772 - ERVL LTR ERVL -3486 2278 1732 1882 105 72 11 chr10 13230571 13230848 -132358440 - AluSx SINE Alu -18 294 1 380 269 9 19 chr10 13230848 13230956 -132358332 + MER94 DNA DNA 27 133 -1 241 222 19 0 chr10 13231119 13231173 -132358115 - MER5C DNA MER1_type -200 124 70 2160 129 0 3 chr10 13231463 13231758 -132357530 + AluSx SINE Alu 1 294 -18 204 321 0 0 chr10 13233279 13233332 -132355956 - MER5B DNA MER1_type -1 177 125 1398 93 0 0 chr10 13233657 13233829 -132355459 + AluSc SINE Alu 127 298 -11 219 69 0 0 chr10 13234093 13234122 -132355166 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 2001 153 0 0 chr10 13234124 13234406 -132354882 - AluSx SINE Alu -30 282 1 899 238 74 37 chr10 13234456 13234809 -132354479 + MLT1J LTR MaLR 102 467 -44 978 198 0 0 chr10 13234879 13235036 -132354252 + FRAM SINE Alu 1 157 -9 2763 99 59 0 chr10 13235037 13235441 -132353847 + MSTA LTR MaLR 1 428 0 2087 125 4 0 chr10 13235500 13235781 -132353507 + AluSq SINE Alu 1 282 -31 201 59 29 0 chr10 13235781 13235815 -132353473 + (CAAAA)n Simple_repeat Simple_repeat 1 180 0 644 266 107 29 chr10 13236316 13236891 -132352397 - L1MC5 LINE L1 -575 7386 6554 1051 231 197 41 chr10 13237160 13237590 -132351698 - L1MC4a LINE L1 -1582 6226 5670 2406 71 0 7 chr10 13237590 13237900 -132351388 - AluY SINE Alu -2 309 2 1051 231 197 41 chr10 13237900 13238083 -132351205 - L1MC4a LINE L1 -2138 5670 5517 2153 128 0 0 chr10 13238083 13238395 -132350893 - AluSx SINE Alu 0 312 1 2031 119 0 0 chr10 13238764 13239050 -132350238 + AluSg SINE Alu 1 286 -24 1453 232 50 86 chr10 13239381 13239536 -132349752 + L1ME3A LINE L1 5258 5417 -753 2461 50 0 3 chr10 13239536 13239835 -132349453 + AluSx SINE Alu 1 298 -14 1453 232 50 86 chr10 13239835 13240201 -132349087 + L1ME3A LINE L1 5417 5795 -375 762 244 76 10 chr10 13240201 13240398 -132348890 + MER63A DNA MER1_type 1 210 0 1453 232 50 86 chr10 13240398 13240448 -132348840 + L1ME3A LINE L1 5795 5845 -325 1861 169 0 7 chr10 13240448 13240755 -132348533 + AluJb SINE Alu 1 305 -7 1453 232 50 86 chr10 13240755 13240828 -132348460 + L1ME3A LINE L1 5845 5919 -251 1810 176 0 0 chr10 13240828 13241124 -132348164 + AluJb SINE Alu 1 296 -16 1453 232 50 86 chr10 13241124 13241157 -132348131 + L1ME3A LINE L1 5919 5914 -256 2270 102 0 0 chr10 13241157 13241462 -132347826 - AluSq SINE Alu -8 305 1 1453 232 50 86 chr10 13241462 13241500 -132347788 + L1ME3A LINE L1 5913 5951 -219 262 268 80 26 chr10 13241566 13241737 -132347551 + L1ME3A LINE L1 5963 6142 -28 816 235 7 0 chr10 13241772 13241925 -132347363 - MER63A DNA MER1_type -16 194 41 33958 67 8 7 chr10 13242754 13248057 -132341231 - L1PA6 LINE L1 0 6154 847 594 118 12 0 chr10 13248057 13248142 -132341146 - L1PA6 LINE L1 -6050 96 11 2086 97 20 0 chr10 13248151 13248451 -132340837 - AluSq SINE Alu -7 306 1 1081 148 0 101 chr10 13248700 13248909 -132340379 + MLT2B3 LTR ERVL 367 554 0 1620 137 22 11 chr10 13249995 13250265 -132339023 + AluJo SINE Alu 9 281 -31 1010 169 0 0 chr10 13250268 13250440 -132338848 - AluSg/x SINE Alu -5 307 136 2579 54 9 9 chr10 13250462 13250794 -132338494 + L1PA5 LINE L1 5814 6145 -9 201 200 20 0 chr10 13250794 13250844 -132338444 + (TA)n Simple_repeat Simple_repeat 2 52 0 2143 78 7 17 chr10 13250860 13251154 -132338134 + AluY SINE Alu 1 291 -20 1835 132 36 0 chr10 13251159 13251439 -132337849 + AluSq SINE Alu 1 290 -23 2039 111 0 0 chr10 13251914 13252218 -132337070 - AluSc SINE Alu 0 304 1 288 0 0 0 chr10 13252562 13252594 -132336694 + (T)n Simple_repeat Simple_repeat 1 32 0 289 84 4 0 chr10 13253436 13253484 -132335804 - MLT2B1 LTR ERVL -8 507 464 1811 138 7 10 chr10 13253528 13253825 -132335463 - AluJo SINE Alu -16 296 1 1987 223 58 19 chr10 13253836 13254298 -132334990 - MLT2B1 LTR ERVL -40 480 1 644 263 67 5 chr10 13254319 13254513 -132334775 + MER63A DNA MER1_type 3 208 -2 195 69 0 0 chr10 13254627 13254656 -132334632 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2098 119 0 10 chr10 13254668 13254978 -132334310 - AluSx SINE Alu -5 307 1 345 230 0 0 chr10 13254981 13255055 -132334233 - AluJ/FRAM SINE Alu -6 296 223 435 209 63 89 chr10 13255055 13255213 -132334075 + MER51B LTR ERV1 1 154 -223 1202 157 190 15 chr10 13255215 13255483 -132333805 + MER51B LTR ERV1 63 377 0 1546 133 0 0 chr10 13255483 13255709 -132333579 - AluSx SINE Alu -86 226 1 548 285 14 14 chr10 13255849 13255993 -132333295 - MIR3 SINE MIR -25 183 40 366 23 0 0 chr10 13255995 13256038 -132333250 + (TG)n Simple_repeat Simple_repeat 2 44 0 281 235 37 12 chr10 13257321 13257402 -132331886 + MLT1K LTR MaLR 502 584 -4 462 265 32 70 chr10 13257865 13258050 -132331238 + MIR SINE MIR 29 206 -56 24 0 0 0 chr10 13258490 13258514 -132330774 + AT_rich Low_complexity Low_complexity 1 24 0 2400 116 8 8 chr10 13258537 13258892 -132330396 + THE1A LTR MaLR 1 355 0 1591 177 13 29 chr10 13259064 13259375 -132329913 + AluJo SINE Alu 1 306 -6 256 235 2 0 chr10 13259892 13259946 -132329342 + MIR SINE MIR 40 94 -114 1391 207 31 63 chr10 13259962 13260344 -132328944 + MLT1A2 LTR MaLR 5 374 0 228 330 97 0 chr10 13260353 13260456 -132328832 - MIR SINE MIR -42 220 108 694 240 38 36 chr10 13260497 13260717 -132328571 + L1ME1 LINE L1 5944 6157 -9 378 260 9 110 chr10 13260737 13260933 -132328355 + MIR SINE MIR 6 180 -65 271 237 0 53 chr10 13260962 13261038 -132328250 - L2 LINE L2 0 3272 3201 523 143 0 0 chr10 13261081 13261158 -132328130 + FLAM SINE Alu 42 118 -25 360 0 0 0 chr10 13261161 13261201 -132328087 + (CA)n Simple_repeat Simple_repeat 2 41 0 181 286 0 0 chr10 13261217 13261259 -132328029 - L2 LINE L2 -79 3234 3193 2267 132 5 24 chr10 13261289 13261668 -132327620 - L1PA13 LINE L1 0 6163 5792 449 306 133 34 chr10 13261668 13261991 -132327297 - L2 LINE L2 -109 3204 2850 984 308 74 2 chr10 13262071 13262464 -132326824 - L2 LINE L2 -654 2660 2240 2033 116 0 17 chr10 13263209 13263510 -132325778 + AluJb SINE Alu 1 296 -16 219 359 58 0 chr10 13264560 13264663 -132324625 - MIR3 SINE MIR -50 158 50 2197 93 3 0 chr10 13265749 13266049 -132323239 + AluSc SINE Alu 1 301 -8 708 225 50 11 chr10 13266628 13266810 -132322478 - MER5A DNA MER1_type 0 189 1 615 214 193 32 chr10 13267658 13267845 -132321443 - MER20 DNA MER1_type -2 217 1 2422 80 0 0 chr10 13268242 13268555 -132320733 + AluSq SINE Alu 1 313 0 1956 130 3 0 chr10 13268984 13269268 -132320020 + AluSx SINE Alu 7 291 -21 891 172 240 9 chr10 13269414 13269635 -132319653 - MER31B LTR ERV1 0 466 195 457 258 76 15 chr10 13269641 13269773 -132319515 + MER31B LTR ERV1 35 174 -292 997 205 57 28 chr10 13269778 13270064 -132319224 - LTR9 LTR ERV1 0 612 324 2200 79 3 23 chr10 13270123 13270427 -132318861 - AluSp SINE Alu -5 308 11 305 209 0 30 chr10 13270462 13270529 -132318759 - LTR9 LTR ERV1 -299 313 249 * 382 78 0 16 chr10 13270527 13270591 -132318697 - AluSc SINE Alu 0 299 237 * 1227 150 7 113 chr10 13270590 13270864 -132318424 - LTR9 LTR ERV1 -367 245 1 246 234 27 99 chr10 13270864 13270918 -132318370 + MER31B LTR ERV1 192 237 -229 587 186 64 75 chr10 13270919 13271107 -132318181 - MER31B LTR ERV1 -278 188 3 224 291 187 30 chr10 13271139 13271273 -132318015 + MER5B DNA MER1_type 23 177 -1 3655 92 40 84 chr10 13271297 13271334 -132317954 - MER4A LTR ERV1 0 600 563 2197 92 3 0 chr10 13271334 13271638 -132317650 - AluSq SINE Alu -3 310 6 3655 92 40 84 chr10 13271638 13272031 -132317257 - MER4A LTR ERV1 -37 563 154 189 0 0 0 chr10 13272031 13272052 -132317236 + (TTAG)n Simple_repeat Simple_repeat 2 22 0 2235 91 0 0 chr10 13272052 13272339 -132316949 - AluSp SINE Alu -26 287 1 3655 92 40 84 chr10 13272339 13272534 -132316754 - MER4A LTR ERV1 -444 156 1 211 196 20 39 chr10 13273625 13273676 -132315612 - L2 LINE L2 -13 3259 3210 722 226 113 5 chr10 13274651 13274837 -132314451 - L2 LINE L2 -1 3312 3107 1914 103 4 0 chr10 13275132 13275393 -132313895 - AluSq SINE Alu -48 265 4 2056 134 0 0 chr10 13275918 13276216 -132313072 + AluSx SINE Alu 1 298 -14 191 309 77 111 chr10 13277113 13277320 -132311968 + L2 LINE L2 2970 3169 -103 209 238 0 0 chr10 13277402 13277444 -132311844 - L2 LINE L2 -1 3271 3230 990 199 28 33 chr10 13277450 13277661 -132311627 + MER2 DNA MER2_type 1 210 -135 2007 103 3 20 chr10 13277777 13278077 -132311211 + AluSx SINE Alu 1 295 -17 825 267 142 69 chr10 13278174 13278779 -132310509 - L2 LINE L2 0 3313 2674 1916 177 18 9 chr10 13278779 13279113 -132310175 + MER1B DNA MER1_type 1 337 0 825 267 142 69 chr10 13279113 13279245 -132310043 - L2 LINE L2 -639 2674 2553 1288 289 143 29 chr10 13280092 13280463 -132308825 - L2 LINE L2 -645 2669 2342 2937 205 38 17 chr10 13280463 13281102 -132308186 + MER82 DNA MER2_type 1 652 -1 1288 289 143 29 chr10 13281102 13281388 -132307900 - L2 LINE L2 -972 2342 1937 2298 84 3 7 chr10 13281397 13281707 -132307581 - AluSp SINE Alu -4 309 1 1663 167 17 3 chr10 13282628 13282915 -132306373 + AluJo SINE Alu 1 291 -21 1795 145 13 13 chr10 13283457 13283760 -132305528 - AluJo SINE Alu -4 308 6 358 296 38 8 chr10 13284076 13284208 -132305080 - L3b LINE CR1 -241 1342 1207 245 295 29 87 chr10 13284301 13284474 -132304814 + MIR3 SINE MIR 41 203 -5 192 228 76 63 chr10 13284493 13284572 -132304716 + L3b LINE CR1 1250 1329 -254 2083 118 14 0 chr10 13285684 13285981 -132303307 - AluSx SINE Alu -11 301 1 27 29 0 0 chr10 13285991 13286025 -132303263 + AT_rich Low_complexity Low_complexity 1 34 0 2469 100 0 0 chr10 13287014 13287325 -132301963 - AluSx SINE Alu -1 311 1 2386 87 10 0 chr10 13288231 13288529 -132300759 - AluSq SINE Alu -12 301 1 934 181 12 0 chr10 13290580 13290746 -132298542 - FRAM SINE Alu -1 175 8 2208 138 0 0 chr10 13290873 13291185 -132298103 + AluSx SINE Alu 1 312 0 2048 84 0 0 chr10 13291749 13292000 -132297288 + AluSg SINE Alu 1 251 -59 604 140 9 9 chr10 13292209 13292316 -132296972 - FRAM SINE Alu -2 174 68 1253 77 38 6 chr10 13293177 13293360 -132295928 - MER30 DNA MER1_type -41 189 1 484 282 28 15 chr10 13293404 13293622 -132295666 + MIR3 SINE MIR 14 235 -27 388 226 34 89 chr10 13293659 13293805 -132295483 + MIR SINE MIR 69 206 -56 191 175 196 41 chr10 13294363 13294460 -132294828 + L2 LINE L2 3145 3256 -16 225 108 0 0 chr10 13294626 13294663 -132294625 + (CA)n Simple_repeat Simple_repeat 1 37 0 1751 171 0 46 chr10 13294739 13295043 -132294245 + AluJo SINE Alu 5 294 -18 3663 180 28 43 chr10 13295302 13296134 -132293154 - L1MB3 LINE L1 0 6183 5365 228 67 0 0 chr10 13296983 13297013 -132292275 + (CA)n Simple_repeat Simple_repeat 1 30 0 969 169 50 41 chr10 13297493 13297712 -132291576 - MLT1A2 LTR MaLR 0 374 154 235 239 0 0 chr10 13297707 13297753 -132291535 - MLT1L LTR MaLR -416 199 154 * 286 319 173 68 chr10 13297888 13298477 -132290811 - L2 LINE L2 -420 2894 2244 232 286 60 12 chr10 13298967 13299051 -132290237 + L2 LINE L2 3174 3261 -11 1706 129 55 80 chr10 13301211 13301522 -132287766 - AluJo SINE Alu -9 303 1 207 234 91 52 chr10 13302227 13302304 -132286984 + L3 LINE CR1 1161 1240 -337 * 417 295 113 82 chr10 13302302 13302621 -132286667 - L2 LINE L2 0 3272 2944 317 195 0 13 chr10 13303415 13303492 -132285796 + GA-rich Low_complexity Low_complexity 2 77 0 207 338 14 14 chr10 13304441 13304515 -132284773 - L2 LINE L2 -3 3269 3196 189 0 0 0 chr10 13305238 13305259 -132284029 + (TCCA)n Simple_repeat Simple_repeat 1 21 0 1103 111 0 6 chr10 13305259 13305439 -132283849 + (TCTA)n Simple_repeat Simple_repeat 2 180 0 778 182 8 4 chr10 13305439 13305689 -132283599 + (TCCA)n Simple_repeat Simple_repeat 1 251 0 201 111 93 37 chr10 13305678 13305786 -132283502 + (TCTA)n Simple_repeat Simple_repeat 4 117 0 * 266 326 36 8 chr10 13305838 13305967 -132283321 - MIR SINE MIR -76 132 42 24 32 0 0 chr10 13306145 13306176 -132283112 + AT_rich Low_complexity Low_complexity 1 31 0 2325 105 0 3 chr10 13306543 13306847 -132282441 - AluSg SINE Alu -7 303 1 303 269 113 56 chr10 13307081 13307241 -132282047 + MIR SINE MIR 92 260 -2 249 333 13 13 chr10 13307320 13307398 -132281890 + L2 LINE L2 3150 3227 -45 1938 77 109 0 chr10 13307438 13307708 -132281580 + AluSx SINE Alu 12 308 0 272 220 17 0 chr10 13307791 13307850 -132281438 + MIR3 SINE MIR 104 163 -45 1875 128 60 0 chr10 13308362 13308653 -132280635 + AluSx SINE Alu 1 307 0 2051 150 0 25 chr10 13308678 13308998 -132280290 + AluJo SINE Alu 1 312 0 2242 81 0 0 chr10 13309005 13309276 -132280012 + AluSc SINE Alu 1 271 -38 2341 100 7 0 chr10 13309381 13309682 -132279606 - AluSq SINE Alu -10 303 1 226 372 71 46 chr10 13309821 13310146 -132279142 - L2 LINE L2 -7 3265 2933 205 286 18 0 chr10 13310264 13310320 -132278968 + L2 LINE L2 3185 3241 -72 206 365 74 14 chr10 13311045 13311193 -132278095 + L2 LINE L2 2176 2332 -982 406 338 70 6 chr10 13312266 13312423 -132276865 + L2 LINE L2 3103 3269 -3 2035 129 33 3 chr10 13312517 13312820 -132276468 + AluSq SINE Alu 1 312 -1 2219 132 0 0 chr10 13312847 13313142 -132276146 + AluSx SINE Alu 1 295 -17 851 102 31 0 chr10 13313175 13313303 -132275985 - L1M2 LINE L1 -815 5476 5345 2767 161 57 40 chr10 13313333 13313884 -132275404 + L1MB1 LINE L1 5556 6119 -49 2053 126 13 10 chr10 13313884 13314193 -132275095 + AluJb SINE Alu 2 311 -1 2767 161 57 40 chr10 13314193 13314243 -132275045 + L1MB1 LINE L1 6119 6167 -1 2252 100 10 0 chr10 13314387 13314686 -132274602 - AluSq SINE Alu -11 302 1 2256 121 0 0 chr10 13316445 13316750 -132272538 + AluSx SINE Alu 1 305 -7 371 353 26 6 chr10 13316970 13317126 -132272162 - MIR3 SINE MIR 0 208 50 1819 127 3 85 chr10 13317860 13318200 -132271088 - AluSx SINE Alu 0 312 1 1801 136 35 49 chr10 13318534 13318880 -132270408 - MLT1A1 LTR MaLR 0 365 25 925 232 34 19 chr10 13319067 13319274 -132270014 - MIR SINE MIR 0 262 53 296 275 8 67 chr10 13319342 13319462 -132269826 + MIR SINE MIR 90 202 -60 252 206 16 32 chr10 13319914 13319977 -132269311 + L2 LINE L2 3203 3264 -8 2228 97 46 65 chr10 13320658 13320700 -132268588 - THE1B LTR MaLR 0 364 323 2418 91 7 10 chr10 13320700 13321009 -132268279 + AluSq SINE Alu 1 308 -5 2228 97 46 65 chr10 13321009 13321337 -132267951 - THE1B LTR MaLR -41 323 1 472 333 41 31 chr10 13321605 13321800 -132267488 + MIR SINE MIR 61 257 -5 1954 103 29 7 chr10 13321800 13322095 -132267193 - AluSx SINE Alu 0 307 7 655 321 67 8 chr10 13322364 13322501 -132266787 - MIR SINE MIR -1 261 103 2260 114 0 0 chr10 13322501 13322800 -132266488 + AluSx SINE Alu 1 299 -13 655 321 67 8 chr10 13322800 13322902 -132266386 - MIR SINE MIR -159 103 8 288 316 103 40 chr10 13323533 13323707 -132265581 + MIR SINE MIR 21 205 -57 186 333 105 0 chr10 13324040 13324145 -132265143 - L2 LINE L2 -822 2492 2377 2041 85 62 0 chr10 13324176 13324434 -132264854 - AluSc SINE Alu -35 274 1 1722 155 48 30 chr10 13325123 13325459 -132263829 - MLT2D LTR ERVL -48 366 25 2324 109 3 0 chr10 13325805 13326108 -132263180 + AluSx SINE Alu 1 304 -8 374 119 194 0 chr10 13329237 13329304 -132259984 - MADE1 DNA Mariner 0 80 1 194 250 143 36 chr10 13329950 13329967 -132259321 - MIR SINE MIR -56 206 192 2222 120 3 3 chr10 13329967 13330267 -132259021 + AluSx SINE Alu 1 300 -12 194 250 143 36 chr10 13330267 13330333 -132258955 - MIR SINE MIR -70 192 114 440 209 41 12 chr10 13331253 13331425 -132257863 + CT-rich Low_complexity Low_complexity 4 180 0 883 88 0 62 chr10 13331425 13331617 -132257671 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 335 182 20 20 chr10 13331667 13331766 -132257522 + CT-rich Low_complexity Low_complexity 2 100 0 1660 149 39 4 chr10 13331777 13332032 -132257256 - AluJo SINE Alu -44 268 5 230 283 9 94 chr10 13332135 13332241 -132257047 + MIR SINE MIR 154 250 -12 2377 69 3 0 chr10 13332424 13332712 -132256576 + AluSq SINE Alu 11 299 -14 2363 87 0 7 chr10 13333508 13333808 -132255480 + AluSc SINE Alu 1 298 -11 508 216 18 0 chr10 13334539 13334650 -132254638 + MER81 DNA DNA 1 113 -1 315 0 0 0 chr10 13334961 13334996 -132254292 + (CA)n Simple_repeat Simple_repeat 2 36 0 2400 67 0 3 chr10 13336862 13337144 -132252144 + AluSc SINE Alu 5 285 -24 216 0 0 0 chr10 13337949 13337973 -132251315 + (A)n Simple_repeat Simple_repeat 1 24 0 1987 107 11 0 chr10 13340566 13340870 -132248418 + AluSg SINE Alu 1 307 0 320 303 136 80 chr10 13341136 13341298 -132247990 + MER91A DNA MER1_type 11 181 -15 183 139 0 0 chr10 13341738 13341774 -132247514 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 257 321 46 18 chr10 13342100 13342209 -132247079 - MIR SINE MIR -7 255 144 271 140 40 140 chr10 13342319 13342419 -132246869 - L2 LINE L2 -510 2804 2715 1989 90 0 8 chr10 13342689 13342995 -132246293 - AluSc SINE Alu 0 318 15 319 128 0 6 chr10 13342995 13343052 -132246236 - AluSc SINE Alu -268 40 1 1916 115 0 21 chr10 13343550 13343836 -132245452 + AluSg SINE Alu 1 280 -30 354 240 83 0 chr10 13344173 13344269 -132245019 - MER5A DNA MER1_type -77 112 9 340 239 125 0 chr10 13344287 13344375 -132244913 + MER5B DNA MER1_type 3 101 -77 277 277 20 40 chr10 13344539 13344640 -132244648 + L2 LINE L2 207 305 -3009 198 71 0 0 chr10 13344808 13344836 -132244452 + (ATTG)n Simple_repeat Simple_repeat 2 29 0 783 247 4 62 chr10 13344846 13344931 -132244357 - MIR SINE MIR -28 234 146 1800 151 26 7 chr10 13344931 13345050 -132244238 + AluJb SINE Alu 1 116 -196 441 0 0 0 chr10 13345050 13345099 -132244189 + (TAA)n Simple_repeat Simple_repeat 2 50 0 1800 151 26 7 chr10 13345099 13345284 -132244004 + AluJb SINE Alu 116 311 -1 783 247 4 62 chr10 13345284 13345371 -132243917 - MIR SINE MIR -116 146 75 663 208 174 94 chr10 13345371 13345732 -132243556 + MLT1B LTR MaLR 1 390 0 783 247 4 62 chr10 13345732 13345785 -132243503 - MIR SINE MIR -187 75 21 1297 229 64 101 chr10 13345927 13346511 -132242777 - MLT1F1 LTR MaLR -4 563 1 1967 122 3 10 chr10 13346891 13347187 -132242101 - AluSx SINE Alu -18 294 1 271 153 0 225 chr10 13347895 13347916 -132241372 - L2 LINE L2 -5 3308 3284 1807 139 0 17 chr10 13347916 13348203 -132241085 + AluJo SINE Alu 1 282 -30 191 36 36 0 chr10 13348206 13348234 -132241054 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1812 161 0 0 chr10 13348242 13348534 -132240754 + AluSx SINE Alu 1 292 -20 271 153 0 225 chr10 13348534 13348610 -132240678 - L2 LINE L2 -39 3274 3223 447 243 59 53 chr10 13348970 13349139 -132240149 + MIR3 SINE MIR 27 196 -12 391 220 60 44 chr10 13349557 13349739 -132239549 - Charlie7 DNA MER1_type 0 2612 2428 845 153 7 0 chr10 13349789 13349960 -132239328 - AluSg/x SINE Alu 0 310 154 463 253 22 51 chr10 13349962 13350044 -132239244 - Charlie7 DNA MER1_type -291 2321 2238 910 181 13 13 chr10 13350044 13350199 -132239089 - FRAM SINE Alu -7 159 5 463 253 22 51 chr10 13350199 13350294 -132238994 - Charlie7 DNA MER1_type -374 2238 2149 214 244 0 0 chr10 13350365 13350410 -132238878 + CT-rich Low_complexity Low_complexity 3 47 0 788 169 0 22 chr10 13350818 13350954 -132238334 - FLAM_A SINE Alu 0 133 1 531 243 176 0 chr10 13351367 13351515 -132237773 - MER5A DNA MER1_type 0 189 16 2224 105 3 0 chr10 13352220 13352525 -132236763 + AluSx SINE Alu 4 309 -3 436 182 252 7 chr10 13354391 13354534 -132234754 - MER5B DNA MER1_type 0 178 1 25 31 0 0 chr10 13354747 13354779 -132234509 + AT_rich Low_complexity Low_complexity 1 32 0 2338 48 0 14 chr10 13354781 13355073 -132234215 + AluY SINE Alu 1 288 -23 1991 113 45 39 chr10 13355214 13355549 -132233739 - THE1B LTR MaLR -27 337 1 395 77 0 0 chr10 13355707 13355759 -132233529 + MADE1 DNA Mariner 1 52 -28 505 308 42 51 chr10 13355787 13356024 -132233264 - MIR SINE MIR -26 236 2 773 141 15 0 chr10 13356691 13356826 -132232462 - L1MB2 LINE L1 -7 6164 6028 436 189 25 90 chr10 13356826 13356874 -132232414 - L1MB4 LINE L1 0 6180 6130 1625 157 48 3 chr10 13356874 13357168 -132232120 - AluJo SINE Alu -5 307 1 436 189 25 90 chr10 13357168 13357241 -132232047 - L1MB4 LINE L1 -50 6130 6067 217 301 97 21 chr10 13358484 13358577 -132230711 + L2 LINE L2 2875 2974 -339 216 298 77 29 chr10 13358824 13358928 -132230360 + L2 LINE L2 3148 3256 -16 580 149 0 0 chr10 13359836 13359923 -132229365 - 5S rRNA rRNA -31 90 4 494 302 152 34 chr10 13360567 13361008 -132228280 - L3 LINE CR1 -35 1542 1050 896 165 192 46 chr10 13361692 13362058 -132227230 + L1MEc LINE L1 2160 2555 -3660 646 235 122 51 chr10 13362256 13362651 -132226637 - L1MC5 LINE L1 -33 7928 7506 2145 109 0 0 chr10 13364130 13364424 -132224864 + AluSg SINE Alu 11 304 -6 824 250 33 9 chr10 13365749 13365961 -132223327 + MER20 DNA MER1_type 1 217 -2 2179 101 7 0 chr10 13366067 13366373 -132222915 + AluSx SINE Alu 1 308 -4 226 233 87 97 chr10 13366544 13366647 -132222641 + MLT2E LTR ERVL 32 133 -495 462 270 20 0 chr10 13367071 13367171 -132222117 - L1MC1 LINE L1 -23 6310 6209 * 647 222 66 14 chr10 13367160 13367372 -132221916 - L1MCa LINE L1 -1586 4840 4618 975 128 61 0 chr10 13367404 13367568 -132221720 - Tigger5 DNA MER2_type -62 2261 2088 259 143 24 0 chr10 13367565 13367607 -132221681 - Tigger5 DNA MER2_type -2229 94 52 * 6503 237 45 26 chr10 13367623 13368593 -132220695 - L1MCa LINE L1 -1810 4616 3666 1717 158 3 13 chr10 13368593 13368896 -132220392 - AluSx SINE Alu -12 300 1 6503 237 45 26 chr10 13368896 13369943 -132219345 - L1MCa LINE L1 -2760 3666 2575 687 187 32 0 chr10 13369944 13370067 -132219221 - FLAM_C SINE Alu -6 127 1 952 183 145 30 chr10 13370078 13370313 -132218975 - AluJo SINE Alu -47 265 4 280 146 21 0 chr10 13370317 13370365 -132218923 - L1MCa LINE L1 -4027 2580 2532 998 167 0 0 chr10 13370365 13370521 -132218767 - AluSg/x SINE Alu -20 292 137 1250 139 120 11 chr10 13370521 13370807 -132218481 - L1MCa LINE L1 -3934 2492 2176 1125 110 0 0 chr10 13370807 13370971 -132218317 - AluY SINE Alu -15 296 133 1688 145 157 15 chr10 13370972 13371488 -132217800 - L1MCa LINE L1 -4242 2184 1495 897 171 6 28 chr10 13371498 13371679 -132217609 - AluJb SINE Alu -14 298 122 334 83 0 0 chr10 13371679 13371727 -132217561 - L1MCa LINE L1 -4963 1463 1416 1351 202 93 39 chr10 13371737 13371787 -132217501 - L1MCa LINE L1 -5875 551 505 1220 182 84 67 chr10 13371787 13372084 -132217204 + AluJo SINE Alu 1 302 0 1351 202 93 39 chr10 13372084 13372389 -132216899 - L1MCa LINE L1 -5921 505 177 453 256 45 0 chr10 13372451 13372584 -132216704 + Charlie4 DNA MER1_type 70 208 -1753 803 159 0 7 chr10 13372602 13372740 -132216548 - FRAM SINE Alu -14 162 26 382 235 37 0 chr10 13372741 13372822 -132216466 + Charlie4 DNA MER1_type 1878 1961 0 341 313 222 22 chr10 13373027 13373576 -132215712 + L2 LINE L2 121 779 -2535 583 261 234 0 chr10 13373619 13373807 -132215481 + MIR SINE MIR 2 233 -29 181 267 81 58 chr10 13373931 13374017 -132215271 + L2 LINE L2 3226 3313 0 1302 155 188 4 chr10 13374487 13374732 -132214556 + AluSc SINE Alu 1 290 -9 180 0 0 0 chr10 13375368 13375388 -132213900 + (T)n Simple_repeat Simple_repeat 1 20 0 3703 104 45 0 chr10 13376103 13376632 -132212656 + MER41A LTR ERV1 2 554 0 925 224 41 25 chr10 13376897 13377240 -132212048 + MER34C LTR ERV1 59 450 -135 992 196 230 31 chr10 13377306 13377464 -132211824 + MER31-int LTR ERV1 877 1002 -3934 2429 186 35 69 chr10 13377464 13378098 -132211190 + LTR9 LTR ERV1 1 612 0 992 196 230 31 chr10 13378098 13378387 -132210901 + MER31-int LTR ERV1 1002 1413 -3523 596 107 0 62 chr10 13378387 13378499 -132210789 + MER4D LTR ERV1 2 106 -766 2231 203 101 55 chr10 13378499 13379084 -132210204 + LTR9 LTR ERV1 1 612 0 * 4772 131 38 16 chr10 13379084 13379835 -132209453 + MER4D LTR ERV1 103 870 -2 459 200 55 0 chr10 13380003 13380113 -132209175 + MER34 LTR ERV1 122 237 -305 336 179 15 15 chr10 13380113 13380180 -132209108 + MER34 LTR ERV1 476 542 0 546 237 63 80 chr10 13380325 13380807 -132208481 + MER57-int LTR ERV1 2102 3183 -1697 540 206 103 12 chr10 13380788 13380953 -132208335 + MER57-int LTR ERV1 2463 2642 -2294 * 1000 252 33 73 chr10 13381049 13381474 -132207814 + MER57-int LTR ERV1 6744 7151 -386 733 253 122 60 chr10 13381515 13381829 -132207459 + MER57A LTR ERV1 60 395 -8 2078 128 0 0 chr10 13382281 13382585 -132206703 - AluSx SINE Alu -8 304 1 268 227 57 68 chr10 13382587 13382675 -132206613 - L2 LINE L2 -1 3312 3226 377 255 154 72 chr10 13382940 13383148 -132206140 - MIR SINE MIR -18 244 20 2335 103 73 6 chr10 13383154 13383495 -132205793 + THE1B LTR MaLR 1 364 0 243 0 0 0 chr10 13383605 13383632 -132205656 + (CA)n Simple_repeat Simple_repeat 1 27 0 2211 51 4 0 chr10 13383866 13384140 -132205148 - AluY SINE Alu -8 303 29 1577 189 117 45 chr10 13384297 13384742 -132204546 + MLT1J LTR MaLR 35 511 0 1294 150 146 31 chr10 13386239 13386499 -132202789 + AluJo SINE Alu 1 290 -12 256 263 105 44 chr10 13386545 13386659 -132202629 - MER112 DNA MER1_type -17 243 123 2111 113 0 0 chr10 13386672 13386972 -132202316 + AluY SINE Alu 12 311 0 477 241 54 0 chr10 13387338 13387450 -132201838 + L2 LINE L2 3192 3309 -4 208 333 82 30 chr10 13387801 13387936 -132201352 + L2 LINE L2 2913 3054 -218 2339 105 51 20 chr10 13388174 13388526 -132200762 - THE1B LTR MaLR -1 363 1 1095 213 84 24 chr10 13388984 13389280 -132200008 - MER58B DNA MER1_type 0 341 28 2649 125 56 0 chr10 13389543 13389951 -132199337 - MSTB1 LTR MaLR -1 431 1 967 186 0 0 chr10 13390700 13390861 -132198427 - FRAM SINE Alu -5 161 1 1666 124 132 0 chr10 13390886 13391152 -132198136 - AluSx SINE Alu -1 301 1 882 109 0 31 chr10 13391160 13391288 -132198000 - FLAM_C SINE Alu -9 124 1 268 195 123 159 chr10 13391591 13391786 -132197502 + MLT1L LTR MaLR 39 226 -389 564 108 0 0 chr10 13391793 13391867 -132197421 + MER31B LTR ERV1 3 76 -390 2095 223 54 56 chr10 13391921 13392550 -132196738 + MER67B LTR ERV1 34 661 0 2236 175 18 48 chr10 13392623 13392978 -132196310 + MSTA LTR MaLR 2 343 -85 1853 111 68 7 chr10 13392978 13393258 -132196030 - AluSx SINE Alu -2 310 14 2236 175 18 48 chr10 13393258 13393342 -132195946 + MSTA LTR MaLR 343 428 0 404 287 103 17 chr10 13393915 13394089 -132195199 - MLT1K LTR MaLR -244 344 156 2196 119 0 0 chr10 13394318 13394613 -132194675 - AluSx SINE Alu -17 295 1 376 328 0 0 chr10 13394784 13394912 -132194376 - MIR3 SINE MIR -16 192 65 2092 128 0 0 chr10 13395017 13395298 -132193990 + AluSx SINE Alu 1 281 -31 455 0 18 0 chr10 13395298 13395353 -132193935 + (CA)n Simple_repeat Simple_repeat 1 56 0 329 290 71 7 chr10 13396289 13396442 -132192846 + MIR SINE MIR 24 184 -62 2354 95 0 10 chr10 13397484 13397790 -132191498 + AluSc SINE Alu 1 303 -6 1944 127 17 10 chr10 13398741 13399040 -132190248 - AluSx SINE Alu -11 301 1 274 293 208 0 chr10 13399101 13399207 -132190081 + MLT1L LTR MaLR 124 251 -364 294 223 14 50 chr10 13399402 13399541 -132189747 + G-rich Low_complexity Low_complexity 4 137 0 306 237 13 122 chr10 13400256 13400359 -132188929 - MIR SINE MIR -11 251 169 1286 58 204 0 chr10 13400359 13400550 -132188738 + MER30 DNA MER1_type 1 230 0 306 237 13 122 chr10 13400550 13400602 -132188686 - MIR SINE MIR -93 169 113 277 362 0 0 chr10 13401381 13401486 -132187802 + MIR SINE MIR 47 151 -111 1777 108 0 49 chr10 13401488 13401793 -132187495 + AluSx SINE Alu 1 290 -22 308 236 100 9 chr10 13402424 13402534 -132186754 - MIR SINE MIR -30 232 113 560 237 60 84 chr10 13402685 13402934 -132186354 + MLT1J1 LTR MaLR 182 424 -22 2213 84 14 0 chr10 13403329 13403616 -132185672 + AluSg SINE Alu 1 291 -19 404 287 103 17 chr10 13403845 13404019 -132185269 + MLT1K LTR MaLR 156 344 -244 2295 182 19 21 chr10 13404592 13404664 -132184624 - MSTA LTR MaLR 0 428 357 1855 126 65 7 chr10 13404664 13404957 -132184331 + AluSx SINE Alu 1 310 -2 2295 182 19 21 chr10 13404957 13405312 -132183976 - MSTA LTR MaLR -71 357 2 2073 224 54 56 chr10 13405385 13406014 -132183274 - MER67B LTR ERV1 0 661 34 564 108 0 0 chr10 13406068 13406142 -132183146 - MER31B LTR ERV1 -390 76 3 268 195 123 159 chr10 13406149 13406344 -132182944 - MLT1L LTR MaLR -389 226 39 882 109 0 31 chr10 13406647 13406775 -132182513 + FLAM_C SINE Alu 1 124 -9 1666 124 132 0 chr10 13406783 13407049 -132182239 + AluSx SINE Alu 1 301 -1 967 186 0 0 chr10 13407074 13407235 -132182053 + FRAM SINE Alu 1 161 -5 2649 125 56 0 chr10 13407984 13408392 -132180896 + MSTB1 LTR MaLR 1 431 -1 1109 209 84 24 chr10 13408655 13408951 -132180337 + MER58B DNA MER1_type 28 341 0 2333 105 51 20 chr10 13409409 13409761 -132179527 + THE1B LTR MaLR 1 363 -1 2622 128 12 22 chr10 13410293 13410707 -132178581 - MER4E LTR ERV1 -369 410 1 2867 128 27 15 chr10 13411004 13411482 -132177806 + LTR8 LTR ERV1 1 484 -207 363 269 8 15 chr10 13411530 13411664 -132177624 - LTR8 LTR ERV1 -27 664 532 2468 97 0 0 chr10 13413395 13413704 -132175584 - AluSg SINE Alu -1 309 1 1721 138 17 38 chr10 13413733 13414022 -132175266 - AluJo SINE Alu -15 297 15 1802 169 7 0 chr10 13415038 13415322 -132173966 + AluJo SINE Alu 1 286 -26 505 164 39 0 chr10 13415488 13415592 -132173696 + L1MB1 LINE L1 6061 6168 0 1955 136 7 14 chr10 13415605 13415884 -132173404 + AluSx SINE Alu 3 279 -33 528 16 0 0 chr10 13415884 13415945 -132173343 + (CA)n Simple_repeat Simple_repeat 1 61 0 234 200 0 20 chr10 13415946 13415996 -132173292 - Charlie7 DNA MER1_type -2525 87 39 1834 154 48 3 chr10 13416232 13416524 -132172764 + AluJo SINE Alu 1 305 -7 1750 126 15 4 chr10 13416826 13417119 -132172169 + AluSq SINE Alu 19 314 0 27 81 0 0 chr10 13417940 13418002 -132171286 + AT_rich Low_complexity Low_complexity 1 62 0 243 61 0 0 chr10 13418054 13418087 -132171201 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 189 74 0 0 chr10 13418843 13418870 -132170418 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2127 112 14 0 chr10 13418873 13419151 -132170137 - AluSx SINE Alu -30 282 1 445 37 0 0 chr10 13419600 13419654 -132169634 + MADE1 DNA Mariner 1 54 -26 403 119 30 0 chr10 13419649 13419716 -132169572 - MADE1 DNA Mariner -11 69 1 * 584 284 110 63 chr10 13420292 13420757 -132168531 - MLT1G1 LTR MaLR 0 595 20 548 273 103 70 chr10 13420761 13421091 -132168197 - MLT1G1-int LTR MaLR -3 1368 1028 375 373 3 24 chr10 13421753 13422040 -132167248 - MLT1G1-int LTR MaLR -827 544 264 347 258 45 0 chr10 13422104 13422193 -132167095 - MLT1G1 LTR MaLR 0 555 463 574 270 83 49 chr10 13422225 13422429 -132166859 - MLT1G1 LTR MaLR -175 420 210 2152 126 3 10 chr10 13422992 13423302 -132165986 + AluSx SINE Alu 3 310 -2 930 188 0 12 chr10 13424659 13424824 -132164464 + FRAM SINE Alu 4 166 0 315 263 51 51 chr10 13424837 13424974 -132164314 - MIR SINE MIR -48 214 78 2714 101 0 8 chr10 13425168 13425535 -132163753 + THE1B LTR MaLR 1 364 0 35021 59 2 3 chr10 13426348 13431595 -132157693 + L1PA5 LINE L1 912 6152 -2 1264 128 6 0 chr10 13431595 13431775 -132157513 + LTR10E LTR ERV1 453 633 0 733 248 78 9 chr10 13431817 13432035 -132157253 + LTR10E-int LTR ERV1 50 282 -6367 768 155 7 14 chr10 13432290 13432438 -132156850 + MER61-int LTR ERV1 1935 2081 -3136 2387 101 3 0 chr10 13432438 13432744 -132156544 + AluSp SINE Alu 1 307 -6 590 250 92 44 chr10 13432786 13433058 -132156230 + MLT1L LTR MaLR 321 605 -10 227 257 81 0 chr10 13433068 13433142 -132156146 - MIR SINE MIR -112 150 71 696 248 103 92 chr10 13433197 13433730 -132155558 + MER34 LTR ERV1 1 539 -3 3604 251 77 23 chr10 13435541 13436238 -132153050 + L1M3c LINE L1 2136 2794 -4771 2214 121 0 0 chr10 13436238 13436535 -132152753 + AluSg SINE Alu 1 297 -13 297 51 0 0 chr10 13436536 13436575 -132152713 + (CA)n Simple_repeat Simple_repeat 2 40 0 3604 251 77 23 chr10 13436575 13437399 -132151889 + L1M3c LINE L1 2793 3602 -3963 2024 144 29 41 chr10 13437397 13438024 -132151264 + L1MA7 LINE L1 5231 5819 -493 * 70 13 0 0 chr10 13438031 13438108 -132151180 + AT_rich Low_complexity Low_complexity 1 77 0 1028 125 0 24 chr10 13438110 13438278 -132151010 + L1MA7 LINE L1 5803 5966 -325 512 261 8 0 chr10 13438510 13438629 -132150659 + L1MA7 LINE L1 5980 6099 -192 349 167 222 0 chr10 13438679 13438751 -132150537 + Tigger5 DNA MER2_type 2234 2321 -2 936 150 44 0 chr10 13438751 13438931 -132150357 + L1MA8 LINE L1 6101 6288 -3 2145 98 7 36 chr10 13438946 13439253 -132150035 + AluSx SINE Alu 1 298 -14 2225 106 0 10 chr10 13440034 13440336 -132148952 - AluSg SINE Alu -11 299 1 2032 127 3 3 chr10 13440883 13441193 -132148095 + AluSq SINE Alu 1 310 0 248 255 163 1 chr10 13441241 13441369 -132147919 + MIR SINE MIR 8 152 -56 202 333 0 0 chr10 13441427 13441493 -132147795 - L2 LINE L2 -18 3254 3189 182 295 121 68 chr10 13443230 13443420 -132145868 - MIR SINE MIR -7 255 56 228 67 0 0 chr10 13444634 13444664 -132144624 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 994 190 39 0 chr10 13445051 13445230 -132144058 + L1MC1 LINE L1 5992 6177 -156 2187 135 0 3 chr10 13445341 13445652 -132143636 + AluSx SINE Alu 1 310 -2 242 116 23 0 chr10 13445654 13445697 -132143591 + GA-rich Low_complexity Low_complexity 1 44 0 2254 110 7 7 chr10 13446369 13446668 -132142620 - AluSx SINE Alu -13 299 1 207 0 0 0 chr10 13446900 13446923 -132142365 + (GA)n Simple_repeat Simple_repeat 2 24 0 455 213 9 9 chr10 13447223 13447331 -132141957 + MER4A LTR ERV1 1 108 -556 538 166 74 162 chr10 13447416 13447645 -132141643 + MER4A LTR ERV1 140 348 -316 519 183 50 124 chr10 13447678 13447745 -132141543 + MER4C LTR ERV1 275 345 -120 1597 170 76 0 chr10 13447745 13448021 -132141267 - AluJo SINE Alu -15 297 1 519 183 50 124 chr10 13448021 13448155 -132141133 + MER4C LTR ERV1 345 461 -4 279 246 14 0 chr10 13448404 13448473 -132140815 + MIR3 SINE MIR 135 204 -4 840 167 0 0 chr10 13449389 13449521 -132139767 - FLAM_C SINE Alu -1 132 1 2146 113 10 19 chr10 13449526 13449837 -132139451 - AluSq SINE Alu -5 308 1 2358 101 7 3 chr10 13450194 13450501 -132138787 + AluSc SINE Alu 1 308 -1 1462 174 80 27 chr10 13450506 13450853 -132138435 + L1MB1 LINE L1 5799 6168 0 2442 101 3 0 chr10 13450861 13451167 -132138121 + AluSx SINE Alu 1 307 -5 1747 163 34 0 chr10 13451179 13451473 -132137815 + AluSx SINE Alu 2 305 -7 198 0 0 0 chr10 13451476 13451498 -132137790 + (TA)n Simple_repeat Simple_repeat 1 22 0 1977 161 6 0 chr10 13451614 13451925 -132137363 + AluSq SINE Alu 1 313 0 654 159 38 6 chr10 13451976 13452120 -132137168 + L1MD2 LINE L1 5293 5440 -730 2153 134 7 3 chr10 13452120 13452426 -132136862 + AluSx SINE Alu 1 307 -5 4282 175 28 17 chr10 13452431 13453355 -132135933 + L1MB7 LINE L1 5193 6125 -59 3045 203 62 7 chr10 13453521 13454197 -132135091 + L1MD2 LINE L1 5417 6129 -230 1591 60 0 15 chr10 13454198 13454398 -132134890 - AluY SINE Alu -11 300 104 285 118 88 29 chr10 13454467 13454535 -132134753 + MADE1 DNA Mariner 1 72 -8 939 218 23 39 chr10 13454548 13454805 -132134483 + L1MD2 LINE L1 6106 6358 -1 2536 68 3 0 chr10 13454817 13455127 -132134161 + AluY SINE Alu 1 311 0 613 320 120 29 chr10 13456168 13456678 -132132610 + L2 LINE L2 2525 3122 -191 2090 129 11 3 chr10 13456678 13456964 -132132324 - AluSx SINE Alu -20 292 5 613 320 120 29 chr10 13456964 13457170 -132132118 + L2 LINE L2 3122 3308 -5 233 57 29 0 chr10 13457716 13457751 -132131537 + (TTCA)n Simple_repeat Simple_repeat 3 38 0 2147 111 4 0 chr10 13457765 13458045 -132131243 - AluSx SINE Alu -31 281 1 4259 187 60 26 chr10 13458050 13458294 -132130994 + Charlie1a DNA MER1_type 47 281 -2480 2365 73 0 26 chr10 13458294 13458607 -132130681 + AluY SINE Alu 1 305 -6 4259 187 60 26 chr10 13458607 13459288 -132130000 + Charlie1a DNA MER1_type 281 1004 -451 2035 128 0 52 chr10 13459627 13459956 -132129332 - AluSx SINE Alu 0 312 1 270 246 162 7 chr10 13460280 13460422 -132128866 + L1MC4a LINE L1 5843 6006 -1802 2034 138 3 0 chr10 13460438 13460734 -132128554 + AluSx SINE Alu 9 305 -7 2547 113 11 5 chr10 13460750 13461129 -132128159 + L1PB1 LINE L1 5766 6146 -5 264 300 29 0 chr10 13461605 13461709 -132127579 - MIR SINE MIR -66 142 32 2048 129 0 0 chr10 13462442 13462745 -132126543 + AluSx SINE Alu 5 307 0 2307 112 0 3 chr10 13463114 13463418 -132125870 + AluSx SINE Alu 1 303 -9 2106 148 0 0 chr10 13463551 13463856 -132125432 - AluSx SINE Alu -7 305 1 2194 100 0 0 chr10 13464653 13464932 -132124356 - AluSx SINE Alu -15 297 19 2105 116 33 3 chr10 13465080 13465409 -132123879 + L1PA15 LINE L1 5827 6165 0 306 237 13 122 chr10 13466038 13466141 -132123147 - MIR SINE MIR -11 251 169 1286 58 204 0 chr10 13466141 13466332 -132122956 + MER30 DNA MER1_type 1 230 0 306 237 13 122 chr10 13466332 13466384 -132122904 - MIR SINE MIR -93 169 113 277 362 0 0 chr10 13467162 13467267 -132122021 + MIR SINE MIR 47 151 -111 2210 116 0 3 chr10 13467269 13467562 -132121726 + AluSx SINE Alu 1 292 -20 192 341 47 47 chr10 13469043 13469172 -132120116 - MIR SINE MIR -118 144 16 32 67 0 0 chr10 13469875 13469935 -132119353 + GC_rich Low_complexity Low_complexity 1 60 0 222 183 14 56 chr10 13470094 13470165 -132119123 + G-rich Low_complexity Low_complexity 5 72 0 1708 148 37 10 chr10 13470683 13470980 -132118308 - AluJb SINE Alu -3 309 5 1650 170 52 59 chr10 13471015 13471403 -132117885 - MLT1B LTR MaLR -2 388 4 776 269 26 4 chr10 13471537 13471764 -132117524 - MIR SINE MIR -24 238 7 8261 283 53 24 chr10 13472287 13474970 -132114318 - ERVL LTR ERVL -814 4950 2192 1278 285 109 44 chr10 13474978 13475686 -132113602 - ERVL LTR ERVL -3773 1881 1128 603 231 209 0 chr10 13476809 13476991 -132112297 + L1MC4 LINE L1 6460 6679 -1363 4551 203 93 26 chr10 13477049 13478270 -132111018 + L1ME1 LINE L1 3942 5346 -820 2256 122 0 0 chr10 13478270 13478574 -132110714 + AluSx SINE Alu 1 304 -8 4551 203 93 26 chr10 13478574 13479120 -132110168 + L1ME1 LINE L1 5346 5854 -312 2316 109 0 3 chr10 13479204 13479506 -132109782 + AluSg SINE Alu 1 301 -9 6387 158 18 15 chr10 13479512 13480900 -132108388 + L1PA13 LINE L1 4162 5546 -619 1017 114 0 0 chr10 13480950 13481090 -132108198 + AluSg/x SINE Alu 159 298 -14 600 177 8 16 chr10 13481091 13481215 -132108073 + L1PA13 LINE L1 6027 6149 -14 1808 207 106 61 chr10 13481425 13482174 -132107114 + L1MC4 LINE L1 6690 7404 -455 2209 126 3 0 chr10 13482174 13482476 -132106812 + AluSx SINE Alu 2 304 -8 2452 88 10 0 chr10 13482476 13482783 -132106505 + AluY SINE Alu 1 311 0 1808 207 106 61 chr10 13482783 13483060 -132106228 + L1MC4 LINE L1 7403 7858 -1 228 328 39 16 chr10 13483770 13483898 -132105390 - MIR SINE MIR -21 241 111 1591 134 17 10 chr10 13484111 13484402 -132104886 + L1MA2 LINE L1 6011 6303 -1 21 0 0 0 chr10 13484403 13484424 -132104864 + AT_rich Low_complexity Low_complexity 1 21 0 259 323 47 33 chr10 13484813 13484994 -132104294 - MIR3 SINE MIR -64 144 15 2355 122 0 0 chr10 13485537 13485849 -132103439 + AluSx SINE Alu 1 312 0 319 281 73 0 chr10 13486024 13486106 -132103182 - L2 LINE L2 -32 3281 3194 2085 125 0 20 chr10 13486952 13487255 -132102033 + AluSq SINE Alu 1 297 -16 2375 57 0 4 chr10 13487255 13487564 -132101724 + AluY SINE Alu 1 308 0 2064 113 3 3 chr10 13488017 13488331 -132100957 + AluSq SINE Alu 1 314 0 243 61 0 0 chr10 13489266 13489299 -132099989 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 1790 154 0 28 chr10 13490609 13490928 -132098360 - AluJb SINE Alu -2 310 1 315 177 0 0 chr10 13491545 13491607 -132097681 + (TG)n Simple_repeat Simple_repeat 2 63 0 2510 50 0 0 chr10 13491625 13491927 -132097361 + AluY SINE Alu 1 302 -9 244 125 62 0 chr10 13492067 13492115 -132097173 + L1MB7 LINE L1 6133 6183 -1 213 177 15 116 chr10 13492908 13493106 -132096182 + (CGGGG)n Simple_repeat Simple_repeat 2 179 0 * 477 216 28 44 chr10 13492966 13493147 -132096141 + G-rich Low_complexity Low_complexity 1 178 0 388 247 5 54 chr10 13493227 13493413 -132095875 + G-rich Low_complexity Low_complexity 1 177 0 268 177 44 35 chr10 13493357 13493470 -132095818 + (CGCGG)n Simple_repeat Simple_repeat 1 114 0 * 28 71 0 0 chr10 13493529 13493585 -132095703 + GC_rich Low_complexity Low_complexity 1 56 0 273 228 0 0 chr10 13493590 13493669 -132095619 + G-rich Low_complexity Low_complexity 5 83 0 315 222 56 0 chr10 13494433 13494505 -132094783 + L2 LINE L2 3219 3294 -19 1695 155 35 3 chr10 13494941 13495062 -132094226 + AluSx SINE Alu 4 120 -192 216 0 0 0 chr10 13495062 13495086 -132094202 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 1695 155 35 3 chr10 13495086 13495254 -132094034 + AluSx SINE Alu 120 302 -10 1206 137 0 6 chr10 13495456 13495631 -132093657 + MER41C LTR ERV1 1 174 -380 4545 90 9 26 chr10 13495633 13496100 -132093188 + LTR10E LTR ERV1 1 456 -177 10981 41 0 3 chr10 13496100 13498198 -132091090 + L1PA5 LINE L1 4058 6154 0 4545 90 9 26 chr10 13498198 13498374 -132090914 + LTR10E LTR ERV1 456 633 0 860 242 71 8 chr10 13498397 13498637 -132090651 + LTR10E-int LTR ERV1 28 282 -6367 351 213 64 32 chr10 13498875 13498969 -132090319 + LTR10E-int LTR ERV1 975 1071 -5578 268 152 51 0 chr10 13498976 13499055 -132090233 + LTR10E-int LTR ERV1 840 922 -5974 246 164 0 0 chr10 13499369 13499424 -132089864 + GA-rich Low_complexity Low_complexity 2 56 0 1537 106 27 3 chr10 13499478 13499773 -132089515 + LTR10E-int LTR ERV1 1919 2909 -2393 2532 153 38 3 chr10 13500360 13500848 -132088440 + LTR10E-int LTR ERV1 2608 4796 -1853 3150 215 5 12 chr10 13500889 13501201 -132088087 + LTR10E-int LTR ERV1 3375 3683 -3213 7065 112 16 5 chr10 13501201 13502197 -132087091 - LTR13 LTR ERVK 0 1007 1 3150 215 5 12 chr10 13502197 13502457 -132086831 + LTR10E-int LTR ERV1 3683 3943 -2953 381 240 0 10 chr10 13502453 13502553 -132086735 + LTR10E-int LTR ERV1 6550 6648 -1 * 4742 73 5 17 chr10 13502555 13503195 -132086093 + LTR10E LTR ERV1 2 633 0 2210 128 48 29 chr10 13503195 13503448 -132085840 + MER41C LTR ERV1 172 436 -118 2142 109 6 10 chr10 13503448 13503761 -132085527 - AluSp SINE Alu -1 312 1 2210 128 48 29 chr10 13503761 13503883 -132085405 + MER41C LTR ERV1 436 554 0 224 255 20 0 chr10 13504587 13504638 -132084650 - L2 LINE L2 -1384 1930 1879 2103 136 0 0 chr10 13504859 13505167 -132084121 + AluSx SINE Alu 1 308 -4 2062 91 35 0 chr10 13505633 13505920 -132083368 - AluY SINE Alu -14 297 1 2372 70 3 0 chr10 13506297 13506595 -132082693 + AluSp SINE Alu 1 299 -14 575 277 169 0 chr10 13507140 13507306 -132081982 - MER91A DNA MER1_type 0 196 3 1938 112 51 0 chr10 13507915 13508210 -132081078 + AluSx SINE Alu 1 310 -2 440 45 149 0 chr10 13508532 13508599 -132080689 + AluY SINE Alu 226 302 -9 1970 105 21 0 chr10 13508602 13508888 -132080400 - AluSx SINE Alu -18 294 3 2077 128 0 0 chr10 13510060 13510356 -132078932 - AluSx SINE Alu -16 296 1 247 307 13 0 chr10 13510528 13510603 -132078685 + MIR SINE MIR 69 144 -64 975 132 0 0 chr10 13510884 13511020 -132078268 + AluSx SINE Alu 2 137 -175 1250 126 5 0 chr10 13511543 13511734 -132077554 + AluSx SINE Alu 121 312 0 294 73 0 0 chr10 13512211 13512252 -132077036 + (TG)n Simple_repeat Simple_repeat 2 42 0 434 320 107 39 chr10 13512330 13512611 -132076677 - L3 LINE CR1 -20 1557 1258 264 337 47 58 chr10 13512897 13513014 -132076274 + L2 LINE L2 2416 2532 -782 2122 119 0 10 chr10 13513014 13513324 -132075964 - AluSx SINE Alu -5 307 1 264 337 47 58 chr10 13513324 13513396 -132075892 + L2 LINE L2 2532 2603 -711 * 533 250 0 37 chr10 13513390 13513526 -132075762 + L2 LINE L2 3179 3309 -4 194 388 16 8 chr10 13513768 13513889 -132075399 + L2 LINE L2 2914 3035 -237 264 85 0 43 chr10 13514017 13514064 -132075224 + L2 LINE L2 3227 3271 -1 28 71 0 0 chr10 13514325 13514381 -132074907 + AT_rich Low_complexity Low_complexity 1 56 0 269 348 146 33 chr10 13516321 13516517 -132072771 + L2 LINE L2 1971 2143 -1171 2887 97 39 9 chr10 13516517 13516867 -132072421 - L1PB1 LINE L1 0 6151 5813 429 76 0 0 chr10 13516867 13516933 -132072355 + (TA)n Simple_repeat Simple_repeat 2 67 0 1830 127 6 44 chr10 13516938 13517253 -132072035 - AluSc SINE Alu -6 303 1 2887 97 39 9 chr10 13517253 13517329 -132071959 - L1PB1 LINE L1 -341 5810 5706 269 348 146 33 chr10 13517329 13517494 -132071794 + L2 LINE L2 2143 2373 -941 2033 146 39 33 chr10 13517524 13517604 -132071684 + MLT1A1 LTR MaLR 1 79 -286 2044 203 59 67 chr10 13517604 13518160 -132071128 - MLT2B3 LTR ERVL -2 552 1 2033 146 39 33 chr10 13518160 13518442 -132070846 + MLT1A1 LTR MaLR 79 365 0 2447 88 36 36 chr10 13519970 13520334 -132068954 - THE1B LTR MaLR 0 364 1 212 279 38 51 chr10 13520453 13520532 -132068756 - MIR3 SINE MIR -25 183 106 351 0 0 0 chr10 13521105 13521144 -132068144 + (ATG)n Simple_repeat Simple_repeat 2 40 0 1908 98 8 0 chr10 13521150 13521405 -132067883 - AluSc SINE Alu -52 257 1 1803 154 0 0 chr10 13521567 13521847 -132067441 + AluJb SINE Alu 17 296 -16 570 181 0 19 chr10 13522084 13522189 -132067099 - L1M3 LINE L1 -492 5688 5586 2069 151 12 12 chr10 13522334 13522671 -132066617 - MER1B DNA MER1_type 0 337 1 880 235 50 32 chr10 13522719 13523000 -132066288 - L1MB8 LINE L1 -7 6171 5886 440 138 0 11 chr10 13523070 13523143 -132066145 + (TTCC)n Simple_repeat Simple_repeat 3 76 -12 1799 144 47 3 chr10 13523143 13523442 -132065846 - AluSx SINE Alu 0 312 1 440 138 0 11 chr10 13523442 13523455 -132065833 + (TTCC)n Simple_repeat Simple_repeat 76 88 0 241 257 14 27 chr10 13524301 13524375 -132064913 - MIR SINE MIR -28 234 162 460 292 26 47 chr10 13524391 13524412 -132064876 - MER46C DNA MER2_type -13 325 305 1977 141 0 0 chr10 13524412 13524710 -132064578 + AluSx SINE Alu 1 298 -14 460 292 26 47 chr10 13524710 13524921 -132064367 - MER46C DNA MER2_type -33 305 98 388 247 0 0 chr10 13524965 13525050 -132064238 - MIR SINE MIR -108 154 70 827 200 12 0 chr10 13525275 13525445 -132063843 - AluJb SINE Alu -1 311 140 2380 84 0 0 chr10 13525686 13525996 -132063292 - AluSg SINE Alu 0 310 1 610 96 19 10 chr10 13526333 13526437 -132062851 + (TCCC)n Simple_repeat Simple_repeat 4 108 0 2245 59 0 10 chr10 13527263 13527553 -132061735 - AluY SINE Alu -24 287 1 1203 187 0 9 chr10 13527589 13527814 -132061474 - AluJo SINE Alu -89 223 1 1917 131 0 13 chr10 13528432 13528730 -132060558 - AluSx SINE Alu -18 294 1 1624 155 0 31 chr10 13529180 13529470 -132059818 + AluJb SINE Alu 1 281 -31 233 57 29 0 chr10 13529484 13529519 -132059769 + (TGAA)n Simple_repeat Simple_repeat 3 38 0 754 322 120 29 chr10 13530065 13530271 -132059017 - L2 LINE L2 -5 3308 3122 1901 130 14 3 chr10 13530271 13530555 -132058733 + AluSx SINE Alu 5 291 -21 754 322 120 29 chr10 13530555 13531065 -132058223 - L2 LINE L2 -191 3122 2525 284 67 0 0 chr10 13532116 13532161 -132057127 - Alu SINE Alu 0 302 258 262 139 28 0 chr10 13532440 13532512 -132056776 + (TA)n Simple_repeat Simple_repeat 1 74 0 2505 50 0 0 chr10 13533927 13534226 -132055062 - AluY SINE Alu -12 299 1 2125 114 0 3 chr10 13534286 13534593 -132054695 - AluSx SINE Alu -6 306 1 253 217 0 0 chr10 13535917 13535931 -132053357 - L1MA10 LINE L1 0 6334 6321 3796 171 40 20 chr10 13535931 13536819 -132052469 - L1MB5 LINE L1 -5 6161 5227 2557 38 0 19 chr10 13536819 13537134 -132052154 - AluY SINE Alu -2 309 1 3796 171 40 20 chr10 13537134 13537346 -132051942 - L1MB5 LINE L1 -939 5227 5021 472 119 12 60 chr10 13537352 13537436 -132051852 + AluS SINE Alu 220 299 -11 764 156 20 193 chr10 13537436 13537623 -132051665 - L1MB5 LINE L1 -1112 5034 4816 2099 118 26 45 chr10 13537623 13538003 -132051285 - THE1C LTR MaLR 0 375 3 764 156 20 193 chr10 13538003 13538275 -132051013 - L1MB5 LINE L1 -1330 4816 4532 654 213 37 69 chr10 13538250 13538438 -132050850 - L1MB5 LINE L1 -1909 4237 4056 * 863 294 96 0 chr10 13538441 13538734 -132050554 - HAL1 LINE L1 -2179 328 8 2205 103 0 0 chr10 13539520 13539822 -132049466 - AluSc SINE Alu -7 302 1 222 206 39 118 chr10 13540204 13540306 -132048982 - L2 LINE L2 0 3313 3220 285 309 135 29 chr10 13541573 13541780 -132047508 + MIR SINE MIR 5 233 -29 2785 13 0 0 chr10 13543127 13543427 -132045861 - AluY SINE Alu -11 300 1 1875 157 20 0 chr10 13543593 13543893 -132045395 + AluJb SINE Alu 1 306 -6 773 202 0 0 chr10 13543999 13544128 -132045160 - FLAM_C SINE Alu -3 130 2 594 113 160 0 chr10 13544388 13544494 -132044794 - FLAM_C SINE Alu -10 123 1 1575 257 76 14 chr10 13544920 13545370 -132043918 - L1ME LINE L1 -400 5770 5350 2270 113 0 25 chr10 13545370 13545690 -132043598 - AluSx SINE Alu 0 312 1 1575 257 76 14 chr10 13545690 13546191 -132043097 - L1ME LINE L1 -820 5350 4757 2081 98 61 0 chr10 13546204 13546481 -132042807 - AluSc SINE Alu -15 294 1 22 0 0 0 chr10 13546654 13546676 -132042612 + AT_rich Low_complexity Low_complexity 1 22 0 2519 80 0 0 chr10 13546992 13547293 -132041995 + AluSg SINE Alu 1 301 -9 1110 135 18 0 chr10 13547430 13547593 -132041695 - AluSx SINE Alu -20 290 125 23 78 0 0 chr10 13547910 13547961 -132041327 + AT_rich Low_complexity Low_complexity 1 51 0 32 26 0 0 chr10 13548101 13548140 -132041148 + AT_rich Low_complexity Low_complexity 1 39 0 918 193 0 6 chr10 13548146 13548307 -132040981 - FRAM SINE Alu -6 160 1 308 125 0 0 chr10 13548311 13548359 -132040929 - AluSq/x SINE Alu -169 133 86 * 1575 191 17 7 chr10 13548354 13548642 -132040646 - MLT1F LTR MaLR -251 291 1 197 348 35 9 chr10 13548751 13548866 -132040422 + MIR SINE MIR 132 249 -13 424 135 0 14 chr10 13549516 13549590 -132039698 + AluJ/FRAM SINE Alu 228 300 -12 1101 139 0 6 chr10 13549741 13549899 -132039389 - AluJb SINE Alu -14 298 142 2211 134 0 0 chr10 13551215 13551521 -132037767 - AluSx SINE Alu -6 306 1 2211 109 16 0 chr10 13551837 13552140 -132037148 - AluSx SINE Alu -4 308 1 635 86 0 0 chr10 13552142 13552223 -132037065 - AluSq/x SINE Alu -182 131 51 1793 160 3 7 chr10 13553337 13553630 -132035658 + AluJo SINE Alu 20 311 -1 2383 93 7 0 chr10 13553640 13553942 -132035346 + AluSg SINE Alu 1 304 -6 2143 130 3 0 chr10 13554410 13554711 -132034577 + AluSx SINE Alu 1 302 -10 185 32 0 65 chr10 13554716 13554747 -132034541 + (GGAGAA)n Simple_repeat Simple_repeat 4 32 0 23 0 0 0 chr10 13554823 13554846 -132034442 + AT_rich Low_complexity Low_complexity 1 23 0 500 255 7 21 chr10 13556325 13556470 -132032818 - L1MB1 LINE L1 -6 6162 6020 843 182 48 18 chr10 13556827 13556992 -132032296 - AluJo SINE Alu -127 185 16 2145 245 126 10 chr10 13556992 13557934 -132031354 - L1M4c LINE L1 -4516 1375 388 315 259 21 70 chr10 13558119 13558262 -132031026 - L1M4c LINE L1 -5507 384 249 232 333 43 26 chr10 13558344 13558461 -132030827 - L1M3d LINE L1 -5253 638 520 1058 309 63 40 chr10 13558527 13559144 -132030144 - L1M3d LINE L1 -5207 684 15 2356 97 3 3 chr10 13559583 13559883 -132029405 + AluSx SINE Alu 1 300 -12 1967 143 3 31 chr10 13560457 13560778 -132028510 + AluSx SINE Alu 1 312 0 23 68 0 0 chr10 13560796 13560840 -132028448 + AT_rich Low_complexity Low_complexity 1 44 0 5573 170 63 132 chr10 13560856 13562709 -132026579 + L1MC2 LINE L1 44 1881 -4545 3275 212 58 45 chr10 13562714 13562958 -132026330 + L1MC2 LINE L1 2251 2490 -3936 2323 117 0 0 chr10 13562958 13563265 -132026023 + AluSg SINE Alu 1 307 -3 3275 212 58 45 chr10 13563265 13563594 -132025694 + L1MC2 LINE L1 2490 2813 -3613 1575 190 23 72 chr10 13563594 13563984 -132025304 + MLT1A2 LTR MaLR 4 374 0 3275 212 58 45 chr10 13563984 13564071 -132025217 + L1MC2 LINE L1 2813 2897 -3529 2288 135 76 22 chr10 13564071 13564185 -132025103 - MSTB1 LTR MaLR 0 432 326 1989 143 28 0 chr10 13564185 13564472 -132024816 - AluSx SINE Alu -17 295 1 2288 135 76 22 chr10 13564472 13564764 -132024524 - MSTB1 LTR MaLR -106 326 4 3275 212 58 45 chr10 13564764 13565030 -132024258 + L1MC2 LINE L1 2897 3158 -3268 1869 129 17 17 chr10 13565030 13565317 -132023971 + AluSx SINE Alu 1 287 -25 294 29 0 0 chr10 13565317 13565352 -132023936 + (TA)n Simple_repeat Simple_repeat 2 36 0 3275 212 58 45 chr10 13565352 13565717 -132023571 + L1MC2 LINE L1 3157 3558 -2868 2285 229 29 24 chr10 13565762 13565879 -132023409 + L1MC2 LINE L1 4648 4763 -1663 2422 100 0 0 chr10 13565879 13566188 -132023100 + AluSq SINE Alu 1 309 -4 2285 229 29 24 chr10 13566188 13566693 -132022595 + L1MC2 LINE L1 4763 5273 -1153 * 3748 125 21 22 chr10 13566689 13566808 -132022480 + L1MC2 LINE L1 5482 5600 -1024 1774 172 14 3 chr10 13566808 13567104 -132022184 + AluJo SINE Alu 1 299 -13 3748 125 21 22 chr10 13567104 13567648 -132021640 + L1MC2 LINE L1 5600 6144 -480 483 115 58 23 chr10 13567648 13567735 -132021553 - LTR49 LTR ERV1 0 595 506 2568 63 3 0 chr10 13567735 13568037 -132021251 + AluSp SINE Alu 1 303 -10 234 0 0 0 chr10 13568037 13568063 -132021225 + (TA)n Simple_repeat Simple_repeat 2 27 0 1610 79 4 109 chr10 13568554 13568820 -132020468 + AluSp SINE Alu 66 303 -10 234 0 0 0 chr10 13568820 13568846 -132020442 + (TA)n Simple_repeat Simple_repeat 2 27 0 1394 152 105 50 chr10 13569188 13569465 -132019823 + AluJb SINE Alu 1 292 -20 2399 109 3 0 chr10 13569809 13570120 -132019168 + AluSx SINE Alu 1 312 0 2187 134 109 14 chr10 13570165 13570570 -132018718 - MER61C LTR ERV1 0 434 6 29760 117 55 37 chr10 13570570 13573711 -132015577 - MER61C-int LTR ERV1 -4 5213 1936 2407 69 3 3 chr10 13573711 13574001 -132015287 - AluSp SINE Alu -23 290 1 29760 117 55 37 chr10 13574001 13575974 -132013314 - MER61C-int LTR ERV1 -3281 1936 2 2113 125 115 18 chr10 13575974 13576358 -132012930 - MER61C LTR ERV1 0 434 14 228 240 0 0 chr10 13576325 13576375 -132012913 - LTR28 LTR ERV1 -958 62 13 * 915 193 6 6 chr10 13576651 13576812 -132012476 + AluJb SINE Alu 133 293 -19 398 316 33 7 chr10 13576812 13576964 -132012324 - MER5A DNA MER1_type -32 157 2 220 284 147 0 chr10 13577046 13577155 -132012133 - L2 LINE L2 0 3313 3189 478 139 9 102 chr10 13577892 13578000 -132011288 + MER4A LTR ERV1 1 98 -566 1851 118 5 57 chr10 13578000 13578170 -132011118 + MER4A LTR ERV1 261 438 -226 1585 96 0 18 chr10 13578170 13578388 -132010900 - AluY SINE Alu -12 299 86 1851 118 5 57 chr10 13578388 13578582 -132010706 + MER4A LTR ERV1 438 664 0 191 222 63 0 chr10 13578655 13578718 -132010570 + MIR SINE MIR 126 192 -70 2179 106 6 13 chr10 13578752 13579063 -132010225 + AluSc SINE Alu 1 309 0 402 290 32 8 chr10 13579318 13579442 -132009846 + MIR SINE MIR 26 152 -110 1851 89 0 0 chr10 13579682 13579918 -132009370 - LTR8 LTR ERV1 0 691 456 375 22 0 0 chr10 13579919 13579964 -132009324 - LTR8 LTR ERV1 -192 499 455 3385 87 26 14 chr10 13579964 13580457 -132008831 - LTR8 LTR ERV1 -192 499 1 4836 131 18 25 chr10 13580754 13581539 -132007749 + MER4E LTR ERV1 1 779 0 218 232 58 0 chr10 13581846 13581915 -132007373 - MIR SINE MIR -70 192 120 223 367 54 31 chr10 13582020 13582173 -132007115 + L2 LINE L2 1814 1962 -1352 1975 134 0 4 chr10 13582173 13582450 -132006838 + AluJo SINE Alu 6 281 -31 223 367 54 31 chr10 13582450 13582645 -132006643 + L2 LINE L2 1962 2170 -1144 198 0 0 0 chr10 13582801 13582823 -132006465 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 2177 89 17 0 chr10 13582873 13583165 -132006123 - AluSc SINE Alu -12 297 1 564 233 60 84 chr10 13583560 13583809 -132005479 - MLT1J1 LTR MaLR -22 424 182 324 227 100 9 chr10 13583960 13584070 -132005218 + MIR SINE MIR 113 232 -30 2169 103 0 10 chr10 13585084 13585375 -132003913 - AluSg SINE Alu -22 288 1 1886 137 17 17 chr10 13585664 13585963 -132003325 - AluJo SINE Alu -13 299 1 257 200 362 29 chr10 13585966 13586071 -132003217 - MIR3 SINE MIR -60 148 9 1036 261 114 19 chr10 13586525 13586885 -132002403 + MLT1J1 LTR MaLR 9 402 -44 623 204 138 22 chr10 13587285 13587358 -132001930 + MLT1H LTR MaLR 3 66 -483 1680 153 29 7 chr10 13587358 13587639 -132001649 + AluJo SINE Alu 11 297 -15 623 204 138 22 chr10 13587639 13587831 -132001457 + MLT1H LTR MaLR 66 310 -239 2057 128 3 0 chr10 13588006 13588294 -132000994 + AluSq SINE Alu 1 289 -24 195 100 0 0 chr10 13588294 13588324 -132000964 + (GGAGA)n Simple_repeat Simple_repeat 2 31 0 403 191 0 24 chr10 13588327 13588411 -132000877 - LTR24B LTR ERV1 -491 85 4 256 277 0 15 chr10 13588460 13588525 -132000763 - L2 LINE L2 -86 3186 3123 1845 130 3 37 chr10 13588792 13589092 -132000196 - AluSx SINE Alu -4 308 19 1834 154 48 3 chr10 13589394 13589686 -131999602 - AluJo SINE Alu -7 305 1 234 200 0 20 chr10 13589922 13589972 -131999316 + Charlie7 DNA MER1_type 39 87 -2525 528 16 0 0 chr10 13589973 13590034 -131999254 + (TG)n Simple_repeat Simple_repeat 1 61 0 1955 136 7 14 chr10 13590034 13590313 -131998975 - AluSx SINE Alu -33 279 3 505 164 39 0 chr10 13590326 13590430 -131998858 - L1MB1 LINE L1 0 6168 6061 1802 169 7 0 chr10 13590596 13590880 -131998408 - AluJo SINE Alu -26 286 1 1721 138 17 38 chr10 13591896 13592185 -131997103 + AluJo SINE Alu 15 297 -15 2460 97 0 0 chr10 13592214 13592522 -131996766 + AluSg SINE Alu 1 308 -2 2625 114 76 36 chr10 13594450 13594480 -131994808 + MER4C LTR ERV1 1 28 -437 2128 97 0 7 chr10 13594480 13594769 -131994519 + AluSc SINE Alu 1 287 -22 2625 114 76 36 chr10 13594769 13595185 -131994103 + MER4C LTR ERV1 28 465 0 341 207 182 16 chr10 13595404 13595525 -131993763 + MER103 DNA DNA 18 158 -8 542 258 84 91 chr10 13595693 13595991 -131993297 + Charlie2 DNA MER1_type 4 299 -2563 2163 202 117 48 chr10 13596022 13596235 -131993053 + Charlie2 DNA MER1_type 1856 2053 -809 2204 87 16 13 chr10 13596235 13596547 -131992741 - AluSq SINE Alu 0 313 1 1908 149 0 0 chr10 13596547 13596848 -131992440 - AluJo SINE Alu -11 301 1 1836 128 0 7 chr10 13596855 13597163 -131992125 - AluSg SINE Alu 0 310 1 2163 202 117 48 chr10 13597163 13597333 -131991955 + Charlie2 DNA MER1_type 2058 2215 -647 1595 136 75 4 chr10 13597333 13597613 -131991675 - AluSc SINE Alu -9 300 1 2163 202 117 48 chr10 13597613 13598015 -131991273 + Charlie2 DNA MER1_type 2215 2706 -156 5101 166 64 7 chr10 13598018 13599348 -131989940 + L1PA16 LINE L1 4488 5933 -233 2004 134 0 6 chr10 13599348 13599661 -131989627 - AluSx SINE Alu -1 311 1 5101 166 64 7 chr10 13599661 13599900 -131989388 + L1PA16 LINE L1 5933 6157 -9 482 203 41 8 chr10 13599908 13600031 -131989257 + Charlie2 DNA MER1_type 2687 2813 -49 2472 48 7 3 chr10 13600033 13600343 -131988945 - AluY SINE Alu 0 311 1 378 355 16 0 chr10 13600766 13600887 -131988401 - MIR SINE MIR -126 136 14 721 113 0 0 chr10 13601044 13601141 -131988147 + AluS SINE Alu 2 98 -215 1804 98 144 0 chr10 13601182 13601446 -131987842 + AluSx SINE Alu 1 302 0 288 0 0 0 chr10 13602230 13602262 -131987026 + (TG)n Simple_repeat Simple_repeat 1 32 0 1745 132 57 0 chr10 13602262 13602527 -131986761 - AluSq SINE Alu -33 280 1 232 280 90 30 chr10 13603022 13603122 -131986166 - MER20B DNA MER1_type -614 169 64 181 321 18 0 chr10 13603199 13603255 -131986033 - MIR SINE MIR -77 131 75 2009 94 0 24 chr10 13603514 13603802 -131985486 - AluSx SINE Alu -17 295 15 2575 95 52 5 chr10 13604562 13604950 -131984338 - L1PA11 LINE L1 0 6174 5769 789 163 0 59 chr10 13605135 13605270 -131984018 - FLAM_C SINE Alu -6 127 1 455 308 98 55 chr10 13605310 13605749 -131983539 + L1MC5 LINE L1 7395 7852 -109 1542 181 35 17 chr10 13605865 13606153 -131983135 + AluJb SINE Alu 1 293 -19 2212 110 0 0 chr10 13606163 13606472 -131982816 + AluSx SINE Alu 1 309 -3 1914 124 3 3 chr10 13606779 13607084 -131982204 - AluSc SINE Alu 0 305 1 216 0 0 0 chr10 13607556 13607580 -131981708 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 2097 118 0 16 chr10 13607891 13608206 -131981082 - AluSx SINE Alu -1 311 2 315 0 0 0 chr10 13608220 13608255 -131981033 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 35001 60 1 2 chr10 13608451 13613697 -131975591 - L1PA5 LINE L1 -1 6153 912 2087 120 7 0 chr10 13614561 13614862 -131974426 - AluSx SINE Alu -9 303 1 2307 72 0 10 chr10 13615091 13615398 -131973890 - AluY SINE Alu -7 304 1 281 299 47 9 chr10 13616192 13616299 -131972989 + L1ME4a LINE L1 5554 5664 -457 3401 190 344 87 chr10 13616513 13616675 -131972613 + L1MA8 LINE L1 1 120 -6930 2536 48 0 0 chr10 13616675 13616986 -131972302 + AluY SINE Alu 1 311 0 3401 190 344 87 chr10 13616986 13617535 -131971753 + L1MA8 LINE L1 120 527 -6523 916 69 0 0 chr10 13617535 13617651 -131971637 - AluSg/x SINE Alu -15 295 180 3401 190 344 87 chr10 13617651 13617723 -131971565 + L1MA8 LINE L1 527 579 -6471 2108 98 17 0 chr10 13617723 13618018 -131971270 - AluSg SINE Alu -10 300 1 3401 190 344 87 chr10 13618018 13618821 -131970467 + L1MA8 LINE L1 579 2133 -4917 * 12876 167 63 12 chr10 13618820 13619422 -131969866 + L1MA8 LINE L1 3587 4157 -3094 1789 147 10 16 chr10 13619422 13619729 -131969559 + AluSx SINE Alu 1 305 -7 12876 167 63 12 chr10 13619729 13622610 -131966678 + L1MA8 LINE L1 4157 7245 -6 503 289 148 30 chr10 13622788 13623161 -131966127 - L2 LINE L2 -5 3308 2892 1967 106 53 0 chr10 13623276 13623559 -131965729 + AluSx SINE Alu 1 298 -14 1792 130 60 3 chr10 13625279 13625564 -131963724 + AluSg SINE Alu 1 301 -9 237 197 171 34 chr10 13625825 13625942 -131963346 + MER103 DNA DNA 33 165 -1 2151 104 3 0 chr10 13626508 13626807 -131962481 - AluSx SINE Alu -11 301 2 347 342 110 57 chr10 13626947 13627301 -131961987 - L2 LINE L2 -3 3269 2897 414 331 34 3 chr10 13627340 13627536 -131961752 - MIR SINE MIR -1 261 61 936 214 77 5 chr10 13628780 13628976 -131960312 - MER58A DNA MER1_type -14 210 1 1780 163 0 7 chr10 13629679 13629986 -131959302 - AluJo SINE Alu -7 305 1 395 289 79 31 chr10 13630098 13630326 -131958962 + L1ME4a LINE L1 5850 6088 -33 182 290 130 22 chr10 13632224 13632362 -131956926 - L2 LINE L2 -277 2995 2843 358 247 31 10 chr10 13632439 13632536 -131956752 - MIR SINE MIR 0 262 164 950 286 40 64 chr10 13632557 13632598 -131956690 - LTR16A LTR ERVL -12 438 398 2154 87 0 19 chr10 13632598 13632907 -131956381 + AluSc SINE Alu 1 303 -6 950 286 40 64 chr10 13632907 13633288 -131956000 - LTR16A LTR ERVL -52 398 26 332 222 10 40 chr10 13633315 13633414 -131955874 - MIR SINE MIR -151 111 16 2279 66 0 41 chr10 13633457 13633774 -131955514 - AluY SINE Alu -7 304 1 2452 122 17 0 chr10 13633941 13634293 -131954995 - THE1B LTR MaLR 0 364 7 676 291 117 7 chr10 13634459 13634768 -131954520 - L1MC4a LINE L1 -1892 5916 5574 528 239 1 39 chr10 13634806 13634972 -131954316 - L1P1 LINE L1 -655 5500 5341 1467 133 26 0 chr10 13638154 13638380 -131950908 + AluSg/x SINE Alu 72 303 -9 574 358 74 39 chr10 13638627 13638736 -131950552 + ERVL LTR ERVL 767 871 -4893 854 212 17 22 chr10 13638736 13638915 -131950373 - MER45A DNA AcHobo 0 178 1 574 358 74 39 chr10 13638915 13639629 -131949659 + ERVL LTR ERVL 871 1619 -4145 411 257 25 20 chr10 13639691 13639936 -131949352 + GA-rich Low_complexity Low_complexity 1 246 0 382 299 34 17 chr10 13639936 13640053 -131949235 + polypurine Low_complexity Low_complexity 1 119 0 195 375 0 0 chr10 13640054 13640110 -131949178 + A-rich Low_complexity Low_complexity 1 56 0 230 360 0 0 chr10 13640111 13640161 -131949127 + G-rich Low_complexity Low_complexity 1 50 0 180 333 0 0 chr10 13640161 13640218 -131949070 + A-rich Low_complexity Low_complexity 1 57 0 1194 181 22 88 chr10 13640466 13640817 -131948471 - LTR29 LTR ERV1 -134 510 137 268 251 0 75 chr10 13640823 13640916 -131948372 - MER34 LTR ERV1 -469 73 3 2301 139 82 13 chr10 13640917 13641369 -131947919 + L1MC2 LINE L1 5860 6342 -2 25 31 0 0 chr10 13641499 13641531 -131947757 + AT_rich Low_complexity Low_complexity 1 32 0 2041 82 3 76 chr10 13641583 13641900 -131947388 - AluSg SINE Alu -16 294 1 1092 110 0 0 chr10 13641900 13642045 -131947243 - AluSq/x SINE Alu -167 145 1 1859 117 24 12 chr10 13642065 13642466 -131946822 + MER4D LTR ERV1 3 482 -421 1969 118 64 4 chr10 13642948 13643228 -131946060 - AluSq SINE Alu -16 297 1 291 248 83 25 chr10 13643629 13643750 -131945538 - MIR SINE MIR -6 256 129 13070 27 1 8 chr10 13643750 13646041 -131943247 + L1PA4 LINE L1 3865 6152 -3 261 164 0 0 chr10 13646049 13646122 -131943166 + (TA)n Simple_repeat Simple_repeat 1 73 0 2575 67 0 3 chr10 13647305 13647617 -131941671 - AluY SINE Alu 0 311 1 230 180 20 20 chr10 13648029 13648079 -131941209 - MER2 DNA MER2_type 0 345 296 203 214 0 32 chr10 13648091 13648217 -131941071 + (CCG)n Simple_repeat Simple_repeat 2 123 0 2255 100 3 10 chr10 13648324 13648633 -131940655 - AluSq SINE Alu -6 307 1 271 306 63 45 chr10 13648796 13649018 -131940270 + L2 LINE L2 2250 2475 -839 369 0 0 0 chr10 13649790 13649831 -131939457 + (TTTA)n Simple_repeat Simple_repeat 1 41 0 2132 66 7 42 chr10 13649831 13650119 -131939169 - AluSg SINE Alu -32 278 1 281 253 36 0 chr10 13650772 13650855 -131938433 - MIR3 SINE MIR -41 167 82 23 0 0 0 chr10 13651298 13651321 -131937967 + GC_rich Low_complexity Low_complexity 1 23 0 252 59 0 0 chr10 13651540 13651574 -131937714 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 596 291 81 62 chr10 13651962 13652282 -131937006 - L2 LINE L2 -511 2803 2478 240 159 48 32 chr10 13652379 13652442 -131936846 + L2 LINE L2 3205 3268 -4 2557 38 14 0 chr10 13652453 13652744 -131936544 + AluY SINE Alu 1 295 -16 1714 148 8 4 chr10 13652744 13653007 -131936281 + AluSx SINE Alu 33 297 -15 711 200 8 8 chr10 13653361 13653486 -131935802 - AluSq/x SINE Alu -187 126 2 310 216 72 52 chr10 13653606 13653759 -131935529 - L2 LINE L2 -702 2612 2457 326 244 288 0 chr10 13654104 13654264 -131935024 - MIR SINE MIR -27 235 30 873 138 0 31 chr10 13654432 13654562 -131934726 + FLAM_C SINE Alu 1 126 -17 1622 159 61 52 chr10 13654701 13655028 -131934260 - MER44D DNA MER2_type 0 609 10 2211 134 0 3 chr10 13655248 13655561 -131933727 + AluSx SINE Alu 1 312 0 828 302 186 23 chr10 13655729 13656009 -131933279 - L2 LINE L2 -1619 1695 1462 2459 78 3 0 chr10 13656009 13656305 -131932983 + AluSp SINE Alu 1 297 -16 297 75 0 0 chr10 13656305 13656345 -131932943 + (TA)n Simple_repeat Simple_repeat 2 41 0 828 302 186 23 chr10 13656345 13656528 -131932760 - L2 LINE L2 -1852 1462 1310 1557 153 12 12 chr10 13656528 13656776 -131932512 + AluJo SINE Alu 17 264 -48 828 302 186 23 chr10 13656776 13656787 -131932501 - L2 LINE L2 -2004 1310 1302 201 74 0 0 chr10 13656787 13656814 -131932474 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 828 302 186 23 chr10 13656814 13657240 -131932048 - L2 LINE L2 -2012 1302 645 257 278 0 0 chr10 13657409 13657463 -131931825 - L2 LINE L2 -10 3303 3250 186 286 32 0 chr10 13657640 13657703 -131931585 - L2 LINE L2 -3163 151 87 857 277 98 39 chr10 13658260 13658481 -131930807 + L1ME4a LINE L1 5318 5525 -645 1969 212 62 58 chr10 13658481 13659090 -131930198 + LTR9 LTR ERV1 1 612 0 857 277 98 39 chr10 13659090 13659363 -131929925 + L1ME4a LINE L1 5525 5834 -336 2245 104 0 0 chr10 13659363 13659661 -131929627 - AluSx SINE Alu -14 298 1 857 277 98 39 chr10 13659661 13659711 -131929577 + L1ME4a LINE L1 5834 5880 -290 253 194 32 86 chr10 13659938 13660031 -131929257 + L1ME4a LINE L1 5969 6056 -65 213 65 0 0 chr10 13660330 13660361 -131928927 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 652 136 152 30 chr10 13660363 13660495 -131928793 - L1PA16 LINE L1 -9 6157 6010 1784 154 3 33 chr10 13661423 13661729 -131927559 - AluJo SINE Alu -15 297 1 251 196 0 0 chr10 13662456 13662507 -131926781 + (TG)n Simple_repeat Simple_repeat 2 52 0 1211 202 37 4 chr10 13662624 13662867 -131926421 + AluJo SINE Alu 44 294 -18 189 107 0 0 chr10 13663730 13663758 -131925530 + (AAATG)n Simple_repeat Simple_repeat 3 30 0 1858 114 51 4 chr10 13663790 13664063 -131925225 - AluSx SINE Alu -4 308 23 790 226 31 20 chr10 13664220 13664415 -131924873 - MER3 DNA MER1_type -5 204 8 2371 69 21 0 chr10 13664502 13664790 -131924498 + AluSp SINE Alu 1 294 -19 1597 163 58 11 chr10 13664810 13665087 -131924201 + AluJb SINE Alu 4 293 -19 404 143 0 0 chr10 13665736 13665806 -131923482 - L1 LINE L1 -1456 4690 4621 23 0 0 0 chr10 13665992 13666015 -131923273 + AT_rich Low_complexity Low_complexity 1 23 0 1842 172 14 3 chr10 13666270 13666561 -131922727 + AluJo SINE Alu 1 294 -18 1039 144 80 21 chr10 13666980 13667168 -131922120 - MER46A DNA MER2_type 0 236 38 22 0 0 0 chr10 13667168 13667190 -131922098 + AT_rich Low_complexity Low_complexity 1 22 0 346 214 7 44 chr10 13667202 13667245 -131922043 - LTR57 LTR ERVL 0 411 368 1572 168 80 0 chr10 13667245 13667519 -131921769 + AluJb SINE Alu 1 296 -16 346 214 7 44 chr10 13667519 13667616 -131921672 - LTR57 LTR ERVL -43 368 240 5585 135 45 12 chr10 13667620 13667762 -131921526 - L1 LINE L1 -1007 5139 5003 1952 113 35 7 chr10 13667762 13668044 -131921244 - AluSx SINE Alu -22 290 1 5585 135 45 12 chr10 13668044 13668884 -131920404 - L1 LINE L1 -1143 5003 4125 1183 145 5 20 chr10 13668888 13669088 -131920200 - LTR57 LTR ERVL -214 197 1 2192 121 10 0 chr10 13669627 13669924 -131919364 + AluSx SINE Alu 1 300 -12 359 333 24 30 chr10 13670777 13670945 -131918343 + MIR3 SINE MIR 33 199 -9 2146 99 13 3 chr10 13671048 13671351 -131917937 + L1PA10 LINE L1 5861 6166 -2 1637 197 0 7 chr10 13671847 13672137 -131917151 + AluJo SINE Alu 1 288 -24 1627 161 67 11 chr10 13672836 13673121 -131916167 + AluJb SINE Alu 8 308 -4 1700 179 0 39 chr10 13673345 13673517 -131915771 - AluJb SINE Alu -16 296 140 1925 141 14 10 chr10 13673517 13673814 -131915474 - AluSq SINE Alu -15 298 1 1700 179 0 39 chr10 13673814 13673948 -131915340 - AluJb SINE Alu -172 140 2 891 294 12 8 chr10 13674744 13674996 -131914292 - MER70A LTR ERVL -106 366 114 243 288 98 37 chr10 13675079 13675242 -131914046 - MLT1J LTR MaLR -229 282 110 1854 161 7 3 chr10 13675432 13675717 -131913571 - AluJb SINE Alu -25 287 2 4030 151 37 23 chr10 13676291 13676366 -131912922 - L1MB7 LINE L1 0 6184 6112 2095 154 0 0 chr10 13676366 13676672 -131912616 + AluSx SINE Alu 1 306 -6 4030 151 37 23 chr10 13676672 13677332 -131911956 - L1MB7 LINE L1 -72 6112 5439 2170 115 0 0 chr10 13677524 13677811 -131911477 + AluSx SINE Alu 6 292 -20 912 197 91 72 chr10 13677962 13678282 -131911006 - L1MB5 LINE L1 0 6174 5849 2306 107 0 0 chr10 13678981 13679279 -131910009 - AluSx SINE Alu -14 298 1 1402 128 55 5 chr10 13679533 13679752 -131909536 + MER30 DNA MER1_type 1 230 0 598 248 159 50 chr10 13679939 13680058 -131909230 - L1ME4a LINE L1 -3 6118 6013 1874 163 7 14 chr10 13680058 13680352 -131908936 + AluJb SINE Alu 1 292 -20 598 248 159 50 chr10 13680352 13680736 -131908552 - L1ME4a LINE L1 -108 6013 5560 766 40 30 0 chr10 13681110 13681209 -131908079 + L1PB1 LINE L1 6012 6113 -38 261 0 0 0 chr10 13681220 13681249 -131908039 + (CAAG)n Simple_repeat Simple_repeat 2 30 0 29 47 0 0 chr10 13681535 13681578 -131907710 + AT_rich Low_complexity Low_complexity 1 43 0 1369 205 0 4 chr10 13682531 13682780 -131906508 - AluJb SINE Alu -1 311 64 22 0 0 0 chr10 13682953 13682975 -131906313 + AT_rich Low_complexity Low_complexity 1 22 0 335 186 0 0 chr10 13683650 13683709 -131905579 + MIR3 SINE MIR 114 172 -36 1790 178 3 0 chr10 13683743 13684036 -131905252 + AluJb SINE Alu 6 299 -13 1151 133 6 0 chr10 13684057 13684223 -131905065 + AluSg/x SINE Alu 137 303 -9 24 0 0 0 chr10 13684939 13684963 -131904325 + AT_rich Low_complexity Low_complexity 1 24 0 2233 108 0 0 chr10 13684963 13685251 -131904037 - AluSx SINE Alu -24 288 1 278 223 127 85 chr10 13685281 13685351 -131903937 - MIR SINE MIR -55 207 141 1556 205 19 3 chr10 13685351 13685658 -131903630 - AluJo SINE Alu 0 312 1 278 223 127 85 chr10 13685658 13685751 -131903537 - MIR SINE MIR -121 141 35 2116 104 11 0 chr10 13686356 13686635 -131902653 - AluSc SINE Alu -13 296 15 2181 117 0 0 chr10 13687330 13687630 -131901658 - AluSx SINE Alu -9 303 4 969 203 107 26 chr10 13687938 13688248 -131901040 - MER20B DNA MER1_type 0 783 449 592 156 0 0 chr10 13688308 13688398 -131900890 - FLAM_A SINE Alu -28 114 25 911 135 172 0 chr10 13688429 13688592 -131900696 - AluJo SINE Alu -17 295 105 697 294 85 14 chr10 13688595 13688877 -131900411 - MER20B DNA MER1_type -447 336 35 2015 136 10 7 chr10 13689300 13689608 -131899680 + AluSx SINE Alu 1 309 -3 2008 156 7 0 chr10 13690514 13690822 -131898466 + AluJo SINE Alu 1 310 -2 726 214 129 102 chr10 13691200 13691282 -131898006 - MLT1D LTR MaLR -4 501 423 2195 123 0 0 chr10 13691282 13691582 -131897706 - AluSx SINE Alu -12 300 1 726 214 129 102 chr10 13691582 13691971 -131897317 - MLT1D LTR MaLR -82 423 17 392 246 82 0 chr10 13692947 13693057 -131896231 + L2 LINE L2 3154 3272 0 1263 130 10 43 chr10 13693187 13693395 -131895893 + MER2 DNA MER2_type 6 206 -139 525 71 0 0 chr10 13693421 13693491 -131895797 + (TA)n Simple_repeat Simple_repeat 2 71 0 4185 127 45 4 chr10 13693493 13694176 -131895112 - L1PB4 LINE L1 -7 6149 5439 1827 141 26 26 chr10 13695236 13695542 -131893746 - AluJo SINE Alu -6 306 1 950 239 47 0 chr10 13695558 13695771 -131893517 - MER58A DNA MER1_type 0 224 2 2760 84 11 0 chr10 13695938 13696295 -131892993 + THE1B LTR MaLR 1 361 -3 1800 146 7 16 chr10 13696539 13696848 -131892440 + AluJb SINE Alu 1 306 -6 913 126 0 15 chr10 13696885 13697020 -131892268 + FLAM_C SINE Alu 1 133 0 403 284 18 18 chr10 13698148 13698257 -131891031 + MIR3 SINE MIR 89 197 -11 1563 169 0 4 chr10 13698483 13698755 -131890533 - AluJb SINE Alu -4 308 38 2153 121 0 0 chr10 13699659 13699966 -131889322 - AluSx SINE Alu -5 307 1 1186 117 0 0 chr10 13700675 13700838 -131888450 + AluSx SINE Alu 1 163 -149 952 106 28 0 chr10 13700926 13701067 -131888221 - AluSg/x SINE Alu -17 295 151 2953 198 108 25 chr10 13701077 13701718 -131887570 - L1ME2 LINE L1 -1 6163 5448 3076 115 27 0 chr10 13701718 13702160 -131887128 - LTR22A LTR ERVK -4 454 1 2953 198 108 25 chr10 13702160 13702276 -131887012 - L1ME2 LINE L1 -716 5448 5343 8154 131 80 14 chr10 13702309 13703165 -131886123 + Tigger1 DNA MER2_type 24 1003 -1415 1773 121 0 11 chr10 13703165 13703437 -131885851 - AluSx SINE Alu -14 298 30 8154 131 80 14 chr10 13703437 13703936 -131885352 + Tigger1 DNA MER2_type 1003 1468 -950 1978 134 3 3 chr10 13703937 13704243 -131885045 - AluSx SINE Alu -6 306 1 2712 7 0 0 chr10 13704453 13704754 -131884534 - AluYb8 SINE Alu -17 301 1 24 53 0 0 chr10 13705478 13705516 -131883772 + AT_rich Low_complexity Low_complexity 1 38 0 24 53 0 0 chr10 13705539 13705577 -131883711 + AT_rich Low_complexity Low_complexity 1 38 0 1010 0 0 0 chr10 13705704 13705811 -131883477 + U6 snRNA snRNA 1 107 0 8104 13 0 0 chr10 13705811 13707136 -131882152 + L1HS LINE L1 4831 6155 0 309 89 0 0 chr10 13707136 13707181 -131882107 + (A)n Simple_repeat Simple_repeat 1 45 0 1764 161 3 3 chr10 13707429 13707720 -131881568 - AluJo SINE Alu -21 291 1 981 182 0 0 chr10 13709027 13709203 -131880085 - FRAM SINE Alu 0 176 1 1786 169 10 0 chr10 13709625 13709926 -131879362 + AluJb SINE Alu 1 304 -8 226 208 0 0 chr10 13709927 13709980 -131879308 - L1MC4 LINE L1 -1342 6700 6648 1345 174 95 11 chr10 13711114 13711378 -131877910 - AluJb SINE Alu 0 312 27 1443 136 0 5 chr10 13711378 13711591 -131877697 + AluSx SINE Alu 1 212 -100 1932 206 49 37 chr10 13711723 13712024 -131877264 + L1MB4 LINE L1 5640 5951 -229 1893 126 27 0 chr10 13712024 13712317 -131876971 - AluSx SINE Alu -11 301 1 1932 206 49 37 chr10 13712317 13712505 -131876783 + L1MB4 LINE L1 5951 6135 -45 1737 162 3 10 chr10 13712508 13712804 -131876484 + AluJo SINE Alu 2 295 -17 337 149 0 27 chr10 13712833 13712907 -131876381 + (GAAA)n Simple_repeat Simple_repeat 4 75 0 1171 164 176 0 chr10 13713521 13713765 -131875523 - AluJo SINE Alu -8 304 18 2175 90 3 0 chr10 13713858 13714159 -131875129 + AluSx SINE Alu 1 302 -10 192 291 58 48 chr10 13714541 13714644 -131874644 + MIR SINE MIR 20 123 -139 1369 143 92 31 chr10 13714644 13714938 -131874350 - AluJo SINE Alu 0 312 1 820 168 0 0 chr10 13714958 13715089 -131874199 - FLAM_C SINE Alu -11 132 2 1963 147 10 0 chr10 13715901 13716208 -131873080 + AluSx SINE Alu 1 310 -2 333 0 0 0 chr10 13716209 13716246 -131873042 + (CA)n Simple_repeat Simple_repeat 2 38 0 1735 145 0 7 chr10 13716521 13716790 -131872498 - AluSx SINE Alu -8 304 38 2126 116 0 0 chr10 13717377 13717701 -131871587 - AluSq SINE Alu 0 313 1 1421 133 46 0 chr10 13717774 13717992 -131871296 + AluSg/x SINE Alu 74 301 -9 330 263 132 9 chr10 13718335 13718449 -131870839 - MIR3 SINE MIR -12 196 69 223 322 67 0 chr10 13718534 13718624 -131870664 - L2 LINE L2 -3 3269 3174 917 198 0 0 chr10 13718626 13718793 -131870495 + FRAM SINE Alu 1 166 -10 1934 100 35 7 chr10 13719240 13719530 -131869758 + AluSx SINE Alu 1 298 -14 299 276 75 37 chr10 13719805 13719939 -131869349 - MIR3 SINE MIR -65 143 5 2059 125 7 0 chr10 13720559 13720863 -131868425 + AluSx SINE Alu 1 306 -6 267 278 139 28 chr10 13721456 13721564 -131867724 - MIR SINE MIR -69 139 20 210 182 55 0 chr10 13722450 13722505 -131866783 + T-rich Low_complexity Low_complexity 2 59 0 1990 92 0 21 chr10 13723396 13723713 -131865575 + AluSx SINE Alu 8 318 0 2212 58 41 10 chr10 13723733 13724027 -131865261 + AluY SINE Alu 1 303 -8 734 142 0 37 chr10 13724382 13724516 -131864772 + FLAM_C SINE Alu 2 130 -3 2113 121 0 0 chr10 13724521 13724818 -131864470 + AluSx SINE Alu 1 297 -15 2226 118 0 0 chr10 13724818 13725131 -131864157 + AluSq SINE Alu 1 313 0 225 203 0 68 chr10 13725539 13725598 -131863690 - L2 LINE L2 -13 3259 3205 2044 122 3 3 chr10 13725633 13725936 -131863352 + AluSx SINE Alu 1 303 -9 699 153 25 0 chr10 13725936 13726054 -131863234 - AluSq/x SINE Alu -191 122 2 2040 96 34 0 chr10 13726460 13726579 -131862709 + AluSg SINE Alu 1 114 -196 279 0 0 0 chr10 13726579 13726610 -131862678 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 2040 96 34 0 chr10 13726610 13726781 -131862507 + AluSg SINE Alu 114 301 -9 265 322 98 51 chr10 13726784 13727079 -131862209 + L2 LINE L2 2323 2631 -683 547 295 156 9 chr10 13727184 13727408 -131861880 - MIR SINE MIR -5 257 1 331 134 15 30 chr10 13727693 13727760 -131861528 - L1MB8 LINE L1 -2 6176 6111 1230 89 6 0 chr10 13727760 13727928 -131861360 + AluSx SINE Alu 1 169 -143 2980 160 16 25 chr10 13727955 13728262 -131861026 - L1MB8 LINE L1 -53 6125 5824 2225 108 0 0 chr10 13728262 13728567 -131860721 - AluSq SINE Alu -7 306 2 2980 160 16 25 chr10 13728567 13728815 -131860473 - L1MB8 LINE L1 -354 5824 5575 1964 114 24 0 chr10 13728816 13729106 -131860182 - AluSx SINE Alu -15 297 1 240 264 217 19 chr10 13729138 13729244 -131860044 + L2 LINE L2 3138 3264 -8 723 142 4 177 chr10 13729433 13729553 -131859735 + MER67D LTR ERV1 1 66 -448 1577 169 0 43 chr10 13729553 13729878 -131859410 + AluJo SINE Alu 1 311 -1 723 142 4 177 chr10 13729878 13729983 -131859305 + MER67D LTR ERV1 66 187 -327 1668 151 3 20 chr10 13730002 13730294 -131858994 - AluJo SINE Alu -25 287 1 276 122 0 0 chr10 13730295 13730336 -131858952 + MER67D LTR ERV1 446 486 -28 1528 163 6 47 chr10 13730546 13730693 -131858595 + AluJo SINE Alu 1 152 -160 2059 113 3 0 chr10 13730693 13731036 -131858252 + AluSp SINE Alu 1 344 0 1528 163 6 47 chr10 13731036 13731207 -131858081 + AluJo SINE Alu 152 307 -5 2296 97 0 0 chr10 13731463 13731772 -131857516 - AluSg SINE Alu -1 309 1 1980 130 0 0 chr10 13732402 13732726 -131856562 + AluSx SINE Alu 1 324 0 1361 151 7 75 chr10 13733574 13733685 -131855603 + AluJo SINE Alu 42 159 -153 1732 157 13 0 chr10 13733685 13733984 -131855304 + AluJb SINE Alu 1 303 -9 2291 72 0 23 chr10 13733984 13734289 -131854999 + AluY SINE Alu 1 298 -13 1361 151 7 75 chr10 13734289 13734455 -131854833 + AluJo SINE Alu 157 301 -11 438 212 15 3 chr10 13734455 13734587 -131854701 + AluJ/FRAM SINE Alu 134 312 0 381 303 42 8 chr10 13734590 13734709 -131854579 - MER5B DNA MER1_type -55 123 1 2125 110 0 3 chr10 13734763 13735062 -131854226 + AluSx SINE Alu 1 298 -14 2114 115 3 0 chr10 13735123 13735427 -131853861 - AluSx SINE Alu -7 305 1 548 141 38 169 chr10 13736432 13736616 -131852672 - MER103 DNA DNA -1 165 6 2265 146 22 0 chr10 13736746 13737102 -131852186 - THE1B LTR MaLR 0 364 1 2303 94 0 0 chr10 13737187 13737494 -131851794 - AluSq SINE Alu -6 307 1 2129 120 3 0 chr10 13737711 13738011 -131851277 - AluSx SINE Alu -11 301 1 1680 141 52 10 chr10 13738422 13738712 -131850576 + AluSx SINE Alu 7 308 -4 348 80 0 0 chr10 13738748 13738798 -131850490 - FLAM_A SINE Alu 0 133 84 1353 173 94 0 chr10 13739312 13739425 -131849863 + AluJb SINE Alu 1 102 -210 189 0 0 0 chr10 13739425 13739446 -131849842 + (CAAT)n Simple_repeat Simple_repeat 4 24 0 1353 173 94 0 chr10 13739446 13739587 -131849701 + AluJb SINE Alu 102 279 -33 233 29 29 0 chr10 13739587 13739621 -131849667 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 1824 162 0 0 chr10 13739632 13739934 -131849354 + AluSx SINE Alu 7 308 -4 696 243 201 36 chr10 13740096 13740355 -131848933 - L1M4 LINE L1 -756 5390 5175 1496 168 10 45 chr10 13740355 13740647 -131848641 - AluJb SINE Alu -24 288 7 696 243 201 36 chr10 13740647 13740865 -131848423 - L1M4 LINE L1 -971 5175 4834 3067 199 71 161 chr10 13741061 13741222 -131848066 - L1M4 LINE L1 -1334 4812 4638 2073 98 3 19 chr10 13741222 13741529 -131847759 - AluSx SINE Alu -10 302 1 3067 199 71 161 chr10 13741529 13742510 -131846778 - L1M4 LINE L1 -1508 4638 3570 1115 191 9 27 chr10 13742510 13742735 -131846553 - AluJo SINE Alu -91 221 1 3067 199 71 161 chr10 13742735 13743146 -131846142 - L1M4 LINE L1 -2576 3570 3216 2144 135 0 0 chr10 13743146 13743458 -131845830 + AluSx SINE Alu 1 312 0 3067 199 71 161 chr10 13743458 13743591 -131845697 - L1M4 LINE L1 -2930 3216 3073 286 132 57 0 chr10 13743594 13743647 -131845641 - L1M4 LINE L1 -3237 2909 2854 243 169 247 26 chr10 13743745 13743822 -131845466 - L1M4 LINE L1 -3269 2877 2784 1852 190 37 16 chr10 13743827 13744201 -131845087 - MSTD LTR MaLR 0 396 15 205 182 0 23 chr10 13744209 13744253 -131845035 + (CTTAT)n Simple_repeat Simple_repeat 2 44 0 381 188 24 0 chr10 13744260 13744345 -131844943 - L1M4 LINE L1 -3367 2779 2693 2232 220 69 62 chr10 13744423 13745277 -131844011 - Charlie2 DNA MER1_type -28 2834 1975 180 112 34 56 chr10 13745307 13745396 -131843892 + (TATAA)n Simple_repeat Simple_repeat 2 88 0 400 241 260 49 chr10 13745396 13745509 -131843779 - Charlie2 DNA MER1_type -874 1988 1900 1587 186 3 10 chr10 13745509 13745805 -131843483 - AluJb SINE Alu -18 294 1 400 241 260 49 chr10 13745805 13745905 -131843383 - Charlie2 DNA MER1_type -962 1900 1822 2275 88 0 0 chr10 13745905 13746202 -131843086 - AluSx SINE Alu -15 297 1 400 241 260 49 chr10 13746202 13746414 -131842874 - Charlie2 DNA MER1_type -1040 1822 1472 273 282 48 10 chr10 13746461 13746564 -131842724 - Charlie2b DNA MER1_type -2099 683 577 306 102 0 0 chr10 13746665 13746714 -131842574 - L1MB4 LINE L1 -1 6179 6131 1880 112 0 14 chr10 13746714 13746990 -131842298 - AluSx SINE Alu -17 295 24 713 191 101 14 chr10 13747020 13747298 -131841990 + HERV9 LTR ERV1 840 1141 -5755 321 194 0 0 chr10 13747296 13747358 -131841930 + HERV9 LTR ERV1 7503 7564 -835 * 7384 105 31 30 chr10 13747354 13749088 -131840200 + pTR5 LTR ERV1 504 8399 0 359 233 29 19 chr10 13749088 13749191 -131840097 + LTR30 LTR ERV1 539 642 -80 1279 109 62 0 chr10 13749192 13749385 -131839903 + LTR12 LTR ERV1 377 581 -133 248 88 0 0 chr10 13749385 13749419 -131839869 - AluSx SINE Alu -268 34 1 1738 145 66 7 chr10 13749419 13749723 -131839565 - L1MB3 LINE L1 -45 6138 5817 1811 153 0 11 chr10 13749723 13750010 -131839278 + AluJb SINE Alu 1 284 -28 1408 137 5 0 chr10 13750174 13750385 -131838903 + AluSx SINE Alu 1 212 -100 469 554 56 5 chr10 13750385 13750593 -131838695 + AluJb SINE Alu 78 297 -11 1971 104 11 11 chr10 13750593 13750872 -131838416 - AluSg SINE Alu -31 279 1 501 253 105 102 chr10 13750952 13751304 -131837984 + MLT1L LTR MaLR 42 394 -221 365 194 61 10 chr10 13751331 13751429 -131837859 + MLT1L LTR MaLR 505 607 -8 2150 114 0 0 chr10 13751449 13751747 -131837541 - AluSx SINE Alu -14 298 1 421 286 34 8 chr10 13752176 13752295 -131836993 + L2 LINE L2 3183 3304 -9 1775 149 3 3 chr10 13752854 13753168 -131836120 - AluJb SINE Alu 0 314 1 1585 146 39 11 chr10 13753465 13753745 -131835543 - AluJo SINE Alu -24 288 1 2142 90 0 3 chr10 13754255 13754544 -131834744 + AluY SINE Alu 1 288 -23 1859 159 27 24 chr10 13754700 13755046 -131834242 - L1MB3 LINE L1 -7 6176 5827 2090 96 3 7 chr10 13755046 13755338 -131833950 - AluSx SINE Alu -11 301 11 1859 159 27 24 chr10 13755338 13755361 -131833927 - L1MB3 LINE L1 -356 5827 5806 2124 123 0 3 chr10 13755582 13755891 -131833397 + AluSx SINE Alu 1 308 -4 1618 125 0 4 chr10 13756078 13756318 -131832970 - AluSx SINE Alu -73 239 1 501 329 14 7 chr10 13756323 13756469 -131832819 - MIR SINE MIR -110 152 6 2338 149 0 13 chr10 13757020 13757396 -131831892 + L1PA16 LINE L1 5699 6069 -97 3154 115 23 6 chr10 13757402 13757881 -131831407 - LTR15 LTR ERV1 -6 487 1 423 129 75 32 chr10 13757881 13757974 -131831314 + L1PA16 LINE L1 6066 6162 -4 2154 110 0 10 chr10 13757985 13758295 -131830993 + AluSc SINE Alu 1 307 -2 2070 132 63 16 chr10 13758313 13758416 -131830872 + MLT1B LTR MaLR 11 108 -282 2255 130 38 78 chr10 13758416 13758457 -131830831 - MSTA LTR MaLR 0 428 387 1894 134 3 10 chr10 13758457 13758763 -131830525 + AluSx SINE Alu 1 304 -8 2255 130 38 78 chr10 13758763 13758933 -131830355 - MSTA LTR MaLR -41 387 212 2119 122 0 0 chr10 13758933 13759237 -131830051 + AluSx SINE Alu 1 304 -8 2255 130 38 78 chr10 13759237 13759470 -131829818 - MSTA LTR MaLR -216 212 1 2070 132 63 16 chr10 13759470 13759729 -131829559 + MLT1B LTR MaLR 108 390 0 469 247 119 50 chr10 13759750 13759969 -131829319 + MER112 DNA MER1_type 2 235 -25 956 202 24 24 chr10 13760995 13761208 -131828080 + MER58A DNA MER1_type 3 215 -9 798 178 39 77 chr10 13761604 13761812 -131827476 + L1MC3 LINE L1 6689 6862 -923 1694 119 35 35 chr10 13761841 13762126 -131827162 + AluJo SINE Alu 11 295 -17 2168 92 0 0 chr10 13762337 13762649 -131826639 + AluSx SINE Alu 1 312 0 2541 39 0 0 chr10 13762866 13763172 -131826116 - AluY SINE Alu -5 306 1 980 63 0 0 chr10 13763452 13763579 -131825709 + AluSg/x SINE Alu 180 306 -6 305 272 68 0 chr10 13764036 13764139 -131825149 + L1MC/D LINE L1 5364 5473 -860 677 211 8 8 chr10 13764143 13764276 -131825012 + FLAM_C SINE Alu 1 133 0 2225 53 3 3 chr10 13764284 13764589 -131824699 + AluY SINE Alu 1 305 0 2145 114 0 0 chr10 13764995 13765302 -131823986 + AluSx SINE Alu 1 307 -5 2089 111 3 43 chr10 13766004 13766329 -131822959 - AluSx SINE Alu 0 312 1 1714 128 38 35 chr10 13767176 13767464 -131821824 - AluSx SINE Alu -23 289 1 2112 113 3 0 chr10 13767630 13767923 -131821365 - AluSq SINE Alu -19 294 1 2207 88 3 0 chr10 13768596 13768892 -131820396 - AluY SINE Alu -14 297 1 1471 165 17 37 chr10 13768975 13769272 -131820016 - AluJb SINE Alu -21 291 1 1692 173 0 16 chr10 13770590 13770902 -131818386 + AluJo SINE Alu 3 309 -3 1946 151 0 3 chr10 13770933 13771244 -131818044 + AluSx SINE Alu 1 310 -2 695 187 0 70 chr10 13771348 13771535 -131817753 - MER96B DNA MER1_type? -243 174 1 838 167 0 0 chr10 13771611 13771743 -131817545 - FLAM_C SINE Alu 0 133 2 2441 50 7 3 chr10 13771755 13772058 -131817230 - AluY SINE Alu -7 304 1 203 197 16 16 chr10 13772207 13772268 -131817020 + (CAATT)n Simple_repeat Simple_repeat 5 65 0 1787 159 3 13 chr10 13772670 13772979 -131816309 + AluJb SINE Alu 1 306 -6 2010 128 0 0 chr10 13773806 13774111 -131815177 - AluSx SINE Alu 0 307 3 2254 91 7 0 chr10 13774226 13774533 -131814755 - AluSp SINE Alu -4 309 1 1535 155 4 15 chr10 13774540 13774804 -131814484 - AluJo SINE Alu -15 297 37 1083 218 130 53 chr10 13774971 13775063 -131814225 + L1ME2 LINE L1 5750 5834 -330 2040 99 45 0 chr10 13775063 13775355 -131813933 + AluSc SINE Alu 1 305 -4 1083 218 130 53 chr10 13775355 13775639 -131813649 + L1ME2 LINE L1 5834 6155 -9 1505 183 4 0 chr10 13775687 13775960 -131813328 + AluSc SINE Alu 1 274 -35 245 27 54 0 chr10 13775963 13776000 -131813288 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1502 150 0 0 chr10 13776524 13776758 -131812530 + AluSx SINE Alu 1 234 -78 1463 137 36 104 chr10 13777202 13777348 -131811940 + AluJo SINE Alu 1 155 -157 223 26 77 0 chr10 13777348 13777387 -131811901 + A-rich Low_complexity Low_complexity 2 43 0 1463 137 36 104 chr10 13777387 13777575 -131811713 + AluJo SINE Alu 155 312 0 2484 52 0 0 chr10 13777815 13778122 -131811166 - AluY SINE Alu -4 307 1 2053 119 3 25 chr10 13778277 13778596 -131810692 + AluSx SINE Alu 1 312 0 2002 104 0 70 chr10 13778613 13778940 -131810348 + AluSx SINE Alu 1 304 -8 473 165 24 0 chr10 13779236 13779321 -131809967 - FLAM_A SINE Alu -55 87 1 213 276 126 11 chr10 13779325 13779412 -131809876 - MER5A DNA MER1_type -38 151 55 2320 89 0 22 chr10 13779438 13779754 -131809534 + AluSp SINE Alu 1 309 -4 192 77 0 0 chr10 13780092 13780118 -131809170 + (TTTTG)n Simple_repeat Simple_repeat 3 28 0 1370 184 25 11 chr10 13780126 13780404 -131808884 - AluJo SINE Alu -30 282 1 2139 128 0 0 chr10 13781276 13781588 -131807700 + AluSq SINE Alu 1 312 -1 2110 87 44 0 chr10 13781915 13782213 -131807075 - AluY SINE Alu 0 311 1 2277 97 0 0 chr10 13782216 13782524 -131806764 - AluSg SINE Alu -2 308 1 1950 78 13 72 chr10 13782621 13782957 -131806331 - AluSp SINE Alu 0 313 7 906 134 0 0 chr10 13784168 13784295 -131804993 - FLAM_C SINE Alu -16 127 1 1966 110 48 0 chr10 13784517 13784808 -131804480 + AluSx SINE Alu 1 305 -7 848 0 20 0 chr10 13784871 13784970 -131804318 - L1PA4 LINE L1 0 6155 6055 285 304 71 42 chr10 13784970 13785133 -131804155 - MER5A DNA MER1_type -5 184 17 1732 139 14 14 chr10 13785176 13785464 -131803824 - AluSx SINE Alu -24 288 1 180 0 0 0 chr10 13785680 13785700 -131803588 + (A)n Simple_repeat Simple_repeat 1 20 0 25 0 0 0 chr10 13786363 13786388 -131802900 + AT_rich Low_complexity Low_complexity 1 25 0 21 57 0 0 chr10 13786606 13786641 -131802647 + AT_rich Low_complexity Low_complexity 1 35 0 1637 171 32 0 chr10 13787784 13788065 -131801223 - AluJo SINE Alu -22 290 1 2177 82 7 7 chr10 13788473 13788766 -131800522 - AluY SINE Alu -16 295 3 3252 134 39 19 chr10 13789027 13789190 -131800098 - MER1A DNA MER1_type -2174 526 368 2199 105 3 0 chr10 13789190 13789495 -131799793 + AluSp SINE Alu 1 306 -7 3252 134 39 19 chr10 13789495 13789847 -131799441 - MER1A DNA MER1_type -2332 368 1 1748 191 41 26 chr10 13790423 13790768 -131798520 - MLT1A1 LTR MaLR -12 353 4 2109 110 0 10 chr10 13792172 13792472 -131796816 - AluSx SINE Alu -4 308 12 474 160 13 0 chr10 13792613 13792688 -131796600 - FLAM_C SINE Alu -34 109 34 27 29 0 0 chr10 13792780 13792814 -131796474 + AT_rich Low_complexity Low_complexity 1 34 0 2121 113 0 0 chr10 13792877 13793179 -131796109 + AluSg SINE Alu 1 302 -8 523 93 0 0 chr10 13793235 13793310 -131795978 - AluJ/FLAM SINE Alu -236 76 2 1070 226 16 8 chr10 13793805 13794016 -131795272 - MIR SINE MIR 0 262 47 1476 145 71 25 chr10 13794016 13794298 -131794990 + AluJo SINE Alu 3 297 -15 1070 226 16 8 chr10 13794298 13794334 -131794954 - MIR SINE MIR -215 47 13 802 181 0 0 chr10 13794610 13794737 -131794551 + AluJb SINE Alu 2 128 -184 470 95 0 0 chr10 13794737 13794800 -131794488 + AluJ/FRAM SINE Alu 233 295 -17 228 272 174 42 chr10 13794818 13794838 -131794450 + L1ME4a LINE L1 5582 5598 -523 2006 141 0 0 chr10 13794838 13795150 -131794138 + AluSx SINE Alu 1 312 0 228 272 174 42 chr10 13795150 13795266 -131794022 + L1ME4a LINE L1 5598 5697 -424 1934 114 52 3 chr10 13795266 13795555 -131793733 + AluSx SINE Alu 1 303 -9 228 272 174 42 chr10 13795555 13795630 -131793658 + L1ME4a LINE L1 5697 5822 -299 1855 82 26 0 chr10 13795654 13795923 -131793365 + AluY SINE Alu 6 320 0 265 77 0 0 chr10 13795923 13795962 -131793326 + (TAAAA)n Simple_repeat Simple_repeat 2 105 0 22 0 0 0 chr10 13795979 13796001 -131793287 + AT_rich Low_complexity Low_complexity 1 22 0 315 179 16 122 chr10 13796023 13796146 -131793142 + L1ME4a LINE L1 5959 6068 -53 1804 130 0 27 chr10 13796417 13796732 -131792556 - AluSx SINE Alu 0 307 1 500 270 91 25 chr10 13796917 13797158 -131792130 - AluY SINE Alu -52 259 3 1749 103 60 18 chr10 13797255 13797537 -131791751 + AluSq SINE Alu 1 294 -19 305 226 104 35 chr10 13797582 13797697 -131791591 - L2 LINE L2 0 3313 3191 274 267 53 80 chr10 13797853 13797945 -131791343 + MER5B DNA MER1_type 30 118 -60 2045 78 57 3 chr10 13797945 13798228 -131791060 - AluSg SINE Alu -12 298 1 274 267 53 80 chr10 13798228 13798285 -131791003 + MER5B DNA MER1_type 118 175 -3 342 245 19 28 chr10 13798662 13798768 -131790520 + LTR16B LTR ERVL 317 421 -43 1947 145 0 13 chr10 13798832 13799143 -131790145 - AluSx SINE Alu -5 307 1 2168 109 0 0 chr10 13800056 13800350 -131788938 - AluSg SINE Alu -16 294 1 813 173 67 0 chr10 13800433 13800583 -131788705 - FRAM SINE Alu -6 170 11 296 151 0 0 chr10 13800584 13800637 -131788651 - L1M4 LINE L1 -364 5810 5758 325 186 0 0 chr10 13800686 13800756 -131788532 - L1MC2 LINE L1 0 6344 6275 2972 153 29 31 chr10 13800758 13801314 -131787974 - L1MC2 LINE L1 -313 6031 5477 1420 99 5 19 chr10 13801318 13801531 -131787757 - AluJb SINE Alu -22 290 81 1316 213 44 6 chr10 13801532 13802004 -131787284 - L1MC2 LINE L1 -755 5391 4995 1837 142 49 28 chr10 13802006 13802330 -131786958 + THE1C LTR MaLR 3 333 -42 2113 72 61 3 chr10 13802330 13802623 -131786665 + AluSg SINE Alu 1 310 0 180 0 0 0 chr10 13802660 13802680 -131786608 + (TAA)n Simple_repeat Simple_repeat 2 21 0 254 125 104 0 chr10 13802688 13802736 -131786552 + THE1C LTR MaLR 308 360 -4 852 202 19 47 chr10 13802738 13802891 -131786397 - L1MC2 LINE L1 -1146 5000 4853 2174 105 0 0 chr10 13802891 13803187 -131786101 + AluSg SINE Alu 1 296 -14 852 202 19 47 chr10 13803187 13803246 -131786042 - L1MC2 LINE L1 -1293 4853 4794 1499 160 71 18 chr10 13803248 13803530 -131785758 - AluJb SINE Alu -15 297 1 382 236 67 98 chr10 13803539 13803665 -131785623 + L1ME4a LINE L1 5714 5842 -279 2015 120 0 10 chr10 13803665 13803965 -131785323 + AluSx SINE Alu 13 309 -3 382 236 67 98 chr10 13803965 13804257 -131785031 + L1ME4a LINE L1 5842 6119 -2 1406 97 5 0 chr10 13804532 13804728 -131784560 - AluSp SINE Alu -13 300 104 524 161 0 0 chr10 13804728 13804815 -131784473 + AluJ SINE Alu 48 134 -178 1512 98 91 58 chr10 13805153 13805287 -131784001 + AluSx SINE Alu 1 129 -218 2119 113 0 0 chr10 13805287 13805578 -131783710 + AluSx SINE Alu 1 291 -21 594 41 0 0 chr10 13805578 13805651 -131783637 + (CTA)n Simple_repeat Simple_repeat 1 73 0 1512 98 91 58 chr10 13805651 13805853 -131783435 + AluSx SINE Alu 128 347 0 875 152 76 18 chr10 13805856 13806027 -131783261 + AluJ SINE Alu 131 311 -1 664 88 10 49 chr10 13807129 13807231 -131782057 - AluJo SINE Alu -12 300 203 * 757 120 88 0 chr10 13807227 13807352 -131781936 - AluJo SINE Alu -173 139 4 191 302 94 9 chr10 13807397 13807503 -131781785 - MIR3 SINE MIR -83 125 11 2044 83 4 0 chr10 13807567 13807871 -131781417 + AluSg SINE Alu 2 306 0 1571 106 32 39 chr10 13807878 13808201 -131781087 + AluY SINE Alu 1 321 0 971 206 123 0 chr10 13808202 13808455 -131780833 + LTR2 LTR ERV1 163 446 -3 728 144 8 0 chr10 13808455 13808580 -131780708 + AluJb SINE Alu 187 312 0 25 0 0 0 chr10 13808604 13808629 -131780659 + AT_rich Low_complexity Low_complexity 1 25 0 2011 68 54 4 chr10 13809483 13809763 -131779525 + AluY SINE Alu 1 294 -17 2139 89 16 3 chr10 13809968 13810272 -131779016 - AluSx SINE Alu -4 308 1 28 29 0 0 chr10 13810498 13810533 -131778755 + AT_rich Low_complexity Low_complexity 1 35 0 1945 125 0 46 chr10 13810868 13811195 -131778093 + AluSq SINE Alu 1 312 -1 924 178 26 5 chr10 13811214 13811405 -131777883 + AluJb SINE Alu 118 312 0 1476 160 32 14 chr10 13811416 13811698 -131777590 + AluJo SINE Alu 1 287 -25 1813 120 7 7 chr10 13811723 13811998 -131777290 + AluSg SINE Alu 1 275 -35 186 43 0 0 chr10 13812001 13812024 -131777264 + (TAA)n Simple_repeat Simple_repeat 2 24 0 1079 155 0 73 chr10 13812173 13812310 -131776978 + AluJo SINE Alu 12 131 -181 2052 102 28 0 chr10 13812310 13812593 -131776695 + AluSx SINE Alu 1 291 -21 1079 155 0 73 chr10 13812593 13812661 -131776627 + AluJo SINE Alu 131 202 -110 387 182 0 0 chr10 13813122 13813199 -131776089 + (CA)n Simple_repeat Simple_repeat 1 77 0 2113 73 4 0 chr10 13813383 13813656 -131775632 - AluSp SINE Alu -13 300 27 1370 160 93 19 chr10 13813835 13814103 -131775185 + AluJo SINE Alu 1 288 -24 23 78 0 0 chr10 13814103 13814154 -131775134 + AT_rich Low_complexity Low_complexity 1 51 0 461 283 68 72 chr10 13814163 13814414 -131774874 - L1ME4a LINE L1 -4 6117 5868 375 250 85 98 chr10 13814393 13814421 -131774867 - L1ME4a LINE L1 -1 6120 6093 * 2354 90 3 0 chr10 13814421 13814733 -131774555 + AluSp SINE Alu 1 313 0 375 250 85 98 chr10 13814733 13814928 -131774360 - L1ME4a LINE L1 -28 6093 5900 2380 50 3 7 chr10 13815523 13815824 -131773464 + AluY SINE Alu 11 310 -1 1100 153 6 0 chr10 13815827 13816010 -131773278 + AluSg/x SINE Alu 127 310 0 1510 156 31 31 chr10 13816014 13816303 -131772985 + AluJb SINE Alu 2 290 -22 366 252 165 81 chr10 13816310 13816419 -131772869 - L1ME4a LINE L1 -174 5947 5848 2044 122 3 0 chr10 13816419 13816722 -131772566 - AluSx SINE Alu -8 304 1 366 252 165 81 chr10 13816722 13817035 -131772253 - L1ME4a LINE L1 -273 5848 5472 2252 81 3 13 chr10 13817035 13817342 -131771946 - AluSp SINE Alu -9 304 1 366 252 165 81 chr10 13817342 13817434 -131771854 - L1ME4a LINE L1 -649 5472 5389 249 296 25 12 chr10 13817488 13817569 -131771719 - MLT1I LTR MaLR -2 407 326 2723 111 27 11 chr10 13817805 13818280 -131771008 + MER1A DNA MER1_type 1 528 -1 2269 98 0 0 chr10 13818423 13818730 -131770558 + AluSg SINE Alu 2 308 -2 2350 84 3 0 chr10 13818744 13819055 -131770233 + AluSp SINE Alu 1 312 -1 2388 77 3 0 chr10 13819064 13819376 -131769912 + AluSp SINE Alu 1 313 0 2188 105 0 0 chr10 13819385 13819689 -131769599 + AluSq SINE Alu 1 304 -9 925 165 31 36 chr10 13819920 13820114 -131769174 + MLT1D LTR MaLR 1 176 -329 242 227 140 53 chr10 13820002 13820139 -131769149 + MLT2C1 LTR ERVL 84 236 -161 * 1656 168 3 3 chr10 13820139 13820449 -131768839 + AluSx SINE Alu 1 310 -2 242 227 140 53 chr10 13820449 13820461 -131768827 + MLT2C1 LTR ERVL 236 246 -151 2210 43 46 4 chr10 13820515 13820796 -131768492 - AluY SINE Alu -18 293 1 2277 97 0 0 chr10 13820799 13821107 -131768181 - AluSg SINE Alu -2 308 1 1956 79 13 69 chr10 13821204 13821539 -131767749 - AluSp SINE Alu 0 313 7 881 142 0 0 chr10 13822750 13822877 -131766411 - FLAM_C SINE Alu -16 127 1 1924 112 49 0 chr10 13823099 13823385 -131765903 + AluSx SINE Alu 1 300 -12 837 10 10 0 chr10 13823449 13823549 -131765739 - L1PA4 LINE L1 0 6155 6055 276 313 74 37 chr10 13823549 13823712 -131765576 - MER5A DNA MER1_type -4 185 17 1702 146 14 14 chr10 13823755 13824043 -131765245 - AluSx SINE Alu -24 288 1 180 0 0 0 chr10 13824259 13824279 -131765009 + (A)n Simple_repeat Simple_repeat 1 20 0 25 0 0 0 chr10 13824942 13824967 -131764321 + AT_rich Low_complexity Low_complexity 1 25 0 21 57 0 0 chr10 13825185 13825220 -131764068 + AT_rich Low_complexity Low_complexity 1 35 0 1637 171 32 0 chr10 13826363 13826644 -131762644 - AluJo SINE Alu -22 290 1 2395 51 7 0 chr10 13827052 13827345 -131761943 - AluY SINE Alu -16 295 1 482 132 0 0 chr10 13827423 13827499 -131761789 + AluS SINE Alu 2 77 -236 235 263 0 0 chr10 13827647 13827704 -131761584 + L1MB8 LINE L1 5548 5604 -566 255 176 0 39 chr10 13828294 13828345 -131760943 + MER58 DNA MER1_type 2347 2395 -25 740 180 0 8 chr10 13830016 13830138 -131759150 + FLAM_C SINE Alu 1 121 -12 4511 51 2 11 chr10 13830855 13831419 -131757869 - L1PA6 LINE L1 0 6154 5596 2086 100 14 3 chr10 13831419 13831708 -131757580 - AluSx SINE Alu -20 292 1 3979 177 52 3 chr10 13831767 13832542 -131756746 + L1MB7 LINE L1 5341 6153 -31 2394 70 0 0 chr10 13832587 13832886 -131756402 + AluY SINE Alu 1 299 -12 610 243 31 35 chr10 13832903 13833161 -131756127 + L1MB8 LINE L1 5814 6170 -8 2221 94 3 0 chr10 13833161 13833458 -131755830 - AluSp SINE Alu -15 298 1 1988 139 3 0 chr10 13833463 13833765 -131755523 - AluSx SINE Alu -9 303 1 1391 183 3 50 chr10 13834141 13834284 -131755004 + AluJo SINE Alu 1 149 -163 2287 83 3 3 chr10 13834284 13834585 -131754703 + AluSq SINE Alu 1 301 -12 1391 183 3 50 chr10 13834585 13834758 -131754530 + AluJo SINE Alu 149 302 -10 2185 108 0 0 chr10 13835409 13835706 -131753582 + AluSg SINE Alu 1 297 -13 2164 109 0 3 chr10 13835723 13836025 -131753263 + AluSx SINE Alu 1 301 -11 1946 149 13 0 chr10 13836894 13837202 -131752086 + AluSx SINE Alu 1 312 0 1955 174 21 9 chr10 13839633 13839967 -131749321 + MER2 DNA MER2_type 1 338 -7 761 213 136 14 chr10 13840873 13841160 -131748128 + MER33 DNA MER1_type 3 324 0 1897 125 0 56 chr10 13841700 13842020 -131747268 + AluSx SINE Alu 1 302 -10 2306 37 40 10 chr10 13842023 13842319 -131746969 + AluY SINE Alu 1 305 -6 2046 109 0 16 chr10 13842324 13842628 -131746660 + AluSx SINE Alu 1 299 -13 275 250 0 40 chr10 13842636 13842736 -131746552 + (CATA)n Simple_repeat Simple_repeat 4 99 0 1817 163 3 0 chr10 13842765 13843060 -131746228 - AluSx SINE Alu -16 296 1 221 297 33 44 chr10 13843070 13843161 -131746127 - MIR SINE MIR -112 150 61 2119 107 3 3 chr10 13843557 13843857 -131745431 + AluSx SINE Alu 1 300 -12 796 143 0 0 chr10 13844564 13844683 -131744605 + L1PB4 LINE L1 6038 6156 0 2128 80 28 0 chr10 13845630 13845918 -131743370 + AluSx SINE Alu 5 300 -12 2003 167 0 3 chr10 13847662 13847973 -131741315 - AluJo SINE Alu -2 310 1 2370 116 0 0 chr10 13849027 13849338 -131739950 - AluSx SINE Alu -1 311 1 2185 125 0 10 chr10 13849342 13849653 -131739635 - AluSx SINE Alu -4 308 1 213 39 0 0 chr10 13849654 13849680 -131739608 + (TTTTC)n Simple_repeat Simple_repeat 4 29 0 1759 130 32 18 chr10 13849681 13849958 -131739330 - AluSx SINE Alu -31 281 1 2300 107 0 3 chr10 13850230 13850529 -131738759 + AluSx SINE Alu 1 298 -14 1959 175 9 55 chr10 13850530 13850964 -131738324 + L1MB7 LINE L1 5362 5775 -409 4423 41 13 4 chr10 13850972 13851512 -131737776 + L1PA5 LINE L1 5606 6150 -4 2034 178 18 3 chr10 13851563 13851946 -131737342 + L1MB7 LINE L1 5782 6170 -14 2160 81 40 0 chr10 13852023 13852318 -131736970 + AluSp SINE Alu 3 308 0 1494 181 11 4 chr10 13852897 13853157 -131736131 + AluJb SINE Alu 50 311 -1 1021 154 0 18 chr10 13853158 13853327 -131735961 - FRAM SINE Alu 0 166 1 850 157 0 15 chr10 13853457 13853591 -131735697 + AluJo SINE Alu 1 132 -170 2101 113 13 3 chr10 13853614 13853923 -131735365 - LTR9 LTR ERV1 -300 312 1 953 171 0 7 chr10 13854022 13854174 -131735114 + AluJo SINE Alu 138 288 -14 2080 124 0 0 chr10 13854176 13854487 -131734801 + AluSx SINE Alu 3 313 0 2537 52 13 3 chr10 13855759 13856067 -131733221 - AluSx SINE Alu 0 312 2 2307 93 10 7 chr10 13856696 13856998 -131732290 - AluSp SINE Alu -10 303 1 1810 149 0 4 chr10 13857411 13857679 -131731609 - AluJb SINE Alu 0 312 46 255 33 0 0 chr10 13857687 13857717 -131731571 + AluY SINE Alu 17 46 -256 2225 94 0 27 chr10 13857778 13858076 -131731212 + AluSq SINE Alu 4 293 -20 2233 124 3 3 chr10 13858734 13859041 -131730247 + AluSx SINE Alu 1 307 -5 1943 158 0 43 chr10 13859256 13859579 -131729709 + AluJo SINE Alu 2 310 -2 212 286 18 0 chr10 13860342 13860398 -131728890 - MIR3 SINE MIR -4 204 148 292 282 13 0 chr10 13860451 13860529 -131728759 + MIR SINE MIR 173 251 -11 396 59 0 0 chr10 13860560 13860611 -131728677 + (CAT)n Simple_repeat Simple_repeat 3 53 0 551 326 164 25 chr10 13860640 13861078 -131728210 - L3 LINE CR1 -288 1289 791 1162 222 32 63 chr10 13861123 13861501 -131727787 + LTR37A LTR ERV1 19 384 -42 226 272 12 0 chr10 13861551 13861632 -131727656 + L1MC4 LINE L1 6614 6695 -1347 1963 154 3 0 chr10 13861652 13861938 -131727350 - AluSx SINE Alu -25 287 1 249 306 71 53 chr10 13861996 13862166 -131727122 - L3 LINE CR1 -888 689 517 846 256 53 71 chr10 13862440 13862874 -131726414 + MER101 LTR ERV1 11 436 -38 1592 154 19 67 chr10 13862874 13863072 -131726216 - AluJo SINE Alu -9 303 124 1884 138 144 46 chr10 13863072 13863416 -131725872 + MSTA LTR MaLR 1 389 -39 2530 71 7 0 chr10 13863416 13863725 -131725563 - AluY SINE Alu 0 311 1 1884 138 144 46 chr10 13863725 13863770 -131725518 + MSTA LTR MaLR 389 428 0 1592 154 19 67 chr10 13863770 13863883 -131725405 - AluJo SINE Alu -188 124 7 333 247 146 56 chr10 13864433 13864490 -131724798 + L1MC/D LINE L1 5614 5664 -2144 1954 149 10 0 chr10 13864490 13864785 -131724503 + AluJb SINE Alu 1 298 -14 333 247 146 56 chr10 13864785 13864905 -131724383 + L1MC/D LINE L1 5664 5807 -2001 2231 98 10 3 chr10 13865260 13865556 -131723732 + AluSg SINE Alu 5 302 -8 1064 157 8 89 chr10 13865780 13865906 -131723382 + MLT1B LTR MaLR 1 101 -289 1920 128 10 0 chr10 13865906 13866203 -131723085 + L1PA13 LINE L1 5864 6163 0 1064 157 8 89 chr10 13866203 13866311 -131722977 + MLT1B LTR MaLR 101 216 -174 2071 156 3 0 chr10 13866784 13867086 -131722202 - AluSx SINE Alu -9 303 1 1777 134 76 10 chr10 13867094 13867384 -131721904 - AluJo SINE Alu -3 309 1 737 304 40 13 chr10 13867465 13867689 -131721599 + MIR SINE MIR 20 249 -13 236 40 0 263 chr10 13867699 13867736 -131721552 - L1MB4 LINE L1 0 6180 6171 2274 101 3 0 chr10 13867736 13868023 -131721265 + AluSp SINE Alu 9 296 -17 236 40 0 263 chr10 13868023 13868061 -131721227 - L1MB4 LINE L1 -9 6171 6125 25 31 0 0 chr10 13868061 13868093 -131721195 + AT_rich Low_complexity Low_complexity 1 32 0 1945 139 7 17 chr10 13868093 13868387 -131720901 - AluSx SINE Alu -21 291 1 3349 149 31 0 chr10 13868387 13868969 -131720319 - L1MB3 LINE L1 -42 6141 5542 420 276 196 14 chr10 13868969 13869183 -131720105 + L2 LINE L2 2201 2453 -861 323 226 95 0 chr10 13869215 13869299 -131719989 - MER45C DNA AcHobo -320 633 542 466 259 28 0 chr10 13869367 13869475 -131719813 - L2 LINE L2 -17 3296 3186 243 286 29 0 chr10 13869495 13869565 -131719723 - L2 LINE L2 -21 3292 3221 1962 158 14 3 chr10 13869695 13869992 -131719296 - AluSx SINE Alu -12 300 1 2313 55 0 41 chr10 13870000 13870325 -131718963 - AluY SINE Alu 0 313 1 2051 164 21 38 chr10 13870326 13870519 -131718769 - L1MC2 LINE L1 -14 7757 7562 2061 162 0 0 chr10 13870519 13870828 -131718460 - AluSx SINE Alu -3 309 1 2051 164 21 38 chr10 13870828 13871106 -131718182 - L1MC2 LINE L1 -209 7562 6142 1679 172 0 11 chr10 13871107 13871392 -131717896 + AluJo SINE Alu 9 290 -22 457 186 0 0 chr10 13871461 13871559 -131717729 - L1ME1 LINE L1 -1 6177 6076 196 382 99 0 chr10 13871559 13871690 -131717598 - L2 LINE L2 -233 3039 2896 782 211 98 79 chr10 13872274 13872341 -131716947 - MLT1J2 LTR MaLR -3 447 383 3053 150 20 76 chr10 13872341 13872989 -131716299 - LTR9 LTR ERV1 0 612 1 782 211 98 79 chr10 13872989 13873126 -131716162 - MLT1J2 LTR MaLR -67 383 250 1747 177 21 10 chr10 13873126 13873414 -131715874 + AluJo SINE Alu 1 291 -21 782 211 98 79 chr10 13873414 13873565 -131715723 - MLT1J2 LTR MaLR -200 250 79 2481 82 0 13 chr10 13873565 13873880 -131715408 + AluY SINE Alu 1 311 0 782 211 98 79 chr10 13873880 13873940 -131715348 - MLT1J2 LTR MaLR -371 79 22 320 322 16 26 chr10 13874356 13874502 -131714786 + MIR SINE MIR 34 180 -68 2343 107 0 0 chr10 13874612 13874911 -131714377 + AluSx SINE Alu 1 299 -13 2257 122 3 6 chr10 13875198 13875510 -131713778 - AluSx SINE Alu -1 311 1 2134 130 0 3 chr10 13875744 13876043 -131713245 + AluSx SINE Alu 2 299 -13 425 239 38 31 chr10 13876156 13876315 -131712973 - LTR33A LTR ERVL -2 521 362 1070 177 62 49 chr10 13876392 13876618 -131712670 + AluJo SINE Alu 5 233 -79 2056 149 7 71 chr10 13876618 13877175 -131712113 + LTR9 LTR ERV1 1 612 0 456 176 0 0 chr10 13877175 13877249 -131712039 + AluJo SINE Alu 230 303 -9 2482 65 3 0 chr10 13877315 13877608 -131711680 - AluY SINE Alu -17 294 1 1922 138 10 27 chr10 13878606 13878902 -131710386 - AluJo SINE Alu -11 301 11 230 287 130 35 chr10 13878974 13879089 -131710199 - MIR SINE MIR -122 140 15 966 230 96 9 chr10 13879461 13879691 -131709597 - MIR SINE MIR 0 262 13 247 239 45 0 chr10 13879699 13879766 -131709522 + MIR SINE MIR 91 160 -102 2183 100 10 23 chr10 13879770 13880071 -131709217 + AluSp SINE Alu 2 298 -15 1186 121 0 18 chr10 13880071 13880236 -131709052 + AluSg/x SINE Alu 134 295 -17 219 69 0 0 chr10 13880237 13880266 -131709022 + (TA)n Simple_repeat Simple_repeat 1 29 0 207 296 42 0 chr10 13880267 13880338 -131708950 + MIR SINE MIR 189 262 0 419 262 143 43 chr10 13880435 13880645 -131708643 + MIR SINE MIR 32 262 0 3750 80 9 23 chr10 13880683 13881090 -131708198 + MER41A LTR ERV1 35 437 -117 1840 98 10 101 chr10 13881090 13881424 -131707864 - AluSx SINE Alu 0 309 4 3750 80 9 23 chr10 13881424 13881541 -131707747 + MER41A LTR ERV1 437 554 0 186 71 0 0 chr10 13882766 13882794 -131706494 + (TTG)n Simple_repeat Simple_repeat 2 29 0 2078 126 0 3 chr10 13882796 13883081 -131706207 - AluSx SINE Alu -18 294 11 356 226 21 11 chr10 13883219 13883312 -131705976 + MER45 DNA AcHobo 35 128 -912 1745 163 21 17 chr10 13883460 13883749 -131705539 - AluJb SINE Alu -22 290 1 2591 166 23 2 chr10 13883749 13884224 -131705064 - L1MB4 LINE L1 -40 6140 5656 2459 89 0 6 chr10 13884224 13884537 -131704751 - AluSp SINE Alu -2 311 1 854 239 164 43 chr10 13884780 13884816 -131704472 + MER110A LTR ERV1 50 80 -411 2702 135 36 7 chr10 13884816 13885230 -131704058 - MSTA LTR MaLR -2 426 1 854 239 164 43 chr10 13885230 13885607 -131703681 + MER110A LTR ERV1 80 491 0 363 297 54 9 chr10 13885702 13885813 -131703475 - L2 LINE L2 0 3272 3157 933 210 86 124 chr10 13885855 13886276 -131703012 + MER34B LTR ERV1 5 400 -165 2066 135 3 31 chr10 13886276 13886594 -131702694 - AluSx SINE Alu -3 309 1 933 210 86 124 chr10 13886594 13886753 -131702535 + MER34B LTR ERV1 400 563 -2 1109 66 0 0 chr10 13888139 13888305 -131700983 - AluSc SINE Alu 0 310 145 373 253 65 146 chr10 13888425 13888871 -131700417 - L2 LINE L2 -801 2513 2104 1607 200 14 11 chr10 13889269 13889572 -131699716 + AluJo SINE Alu 2 305 0 1182 221 83 88 chr10 13889624 13889808 -131699480 + MLT1C LTR MaLR 5 188 -279 2314 114 13 0 chr10 13889808 13890115 -131699173 + AluSx SINE Alu 1 311 -1 1182 221 83 88 chr10 13890115 13890387 -131698901 + MLT1C LTR MaLR 188 459 -8 184 319 111 14 chr10 13890416 13890488 -131698800 + MER5A DNA MER1_type 111 189 0 193 364 0 0 chr10 13890784 13890850 -131698438 + L2 LINE L2 750 815 -2499 758 149 0 0 chr10 13890861 13890975 -131698313 - FLAM_A SINE Alu -5 137 24 345 348 106 0 chr10 13891576 13891737 -131697551 - MIR SINE MIR 0 262 85 523 255 48 39 chr10 13891737 13891945 -131697343 - LTR16C LTR ERVL 0 491 282 301 219 7 22 chr10 13891958 13892048 -131697240 + MLT1D LTR MaLR 4 92 -413 862 209 25 0 chr10 13892077 13892240 -131697048 + FRAM SINE Alu 1 166 -10 1162 270 61 3 chr10 13892254 13892573 -131696715 + MLT1D LTR MaLR 113 457 -48 3910 82 3 91 chr10 13892573 13892648 -131696640 - MER41A LTR ERV1 0 554 474 2320 113 0 0 chr10 13892648 13892950 -131696338 + AluSx SINE Alu 1 302 -10 3910 82 3 91 chr10 13892950 13893481 -131695807 - MER41A LTR ERV1 -80 474 1 1162 270 61 3 chr10 13893481 13893524 -131695764 + MLT1D LTR MaLR 457 496 -9 182 349 79 0 chr10 13893819 13893882 -131695406 - MIR SINE MIR -179 83 16 2164 116 0 7 chr10 13893923 13894215 -131695073 + AluSx SINE Alu 1 290 -22 951 171 7 0 chr10 13894215 13894367 -131694921 + AluSq SINE Alu 134 286 -27 2285 91 3 23 chr10 13894415 13894723 -131694565 - AluSg1 SINE Alu -7 302 1 606 101 0 0 chr10 13894723 13894802 -131694486 - AluSq/x SINE Alu -167 145 67 1323 131 0 30 chr10 13894802 13895001 -131694287 - AluSg SINE Alu -113 197 5 712 177 23 0 chr10 13895017 13895147 -131694141 - FLAM_C SINE Alu 0 133 1 340 219 12 0 chr10 13895147 13895229 -131694059 + MER33 DNA MER1_type 281 363 0 497 224 8 0 chr10 13895994 13896119 -131693169 + CT-rich Low_complexity Low_complexity 1 126 0 2333 86 7 0 chr10 13896119 13896409 -131692879 - AluSx SINE Alu -20 292 1 725 232 6 18 chr10 13896412 13896576 -131692712 - FRAM SINE Alu -15 161 1 881 197 27 22 chr10 13896829 13897012 -131692276 + MLT1D LTR MaLR 3 186 -319 517 188 0 176 chr10 13897017 13897099 -131692189 + MLT1D LTR MaLR 325 420 -206 2239 109 0 35 chr10 13897099 13897411 -131691877 - AluSx SINE Alu -11 301 1 2223 97 0 16 chr10 13897413 13897435 -131691853 - AluSq SINE Alu -9 304 283 262 0 0 0 chr10 13897435 13897464 -131691824 + (TTTA)n Simple_repeat Simple_repeat 2 180 0 2223 97 0 16 chr10 13897464 13897750 -131691538 - AluSq SINE Alu -30 283 1 517 188 0 176 chr10 13897750 13897876 -131691412 + MLT1D LTR MaLR 421 624 -2 199 333 143 0 chr10 13897980 13898064 -131691224 + L2 LINE L2 3146 3241 -31 * 254 292 36 36 chr10 13898050 13898187 -131691101 - L2 LINE L2 -1256 2058 1922 2395 74 0 0 chr10 13898188 13898499 -131690789 + AluY SINE Alu 1 311 0 2052 108 0 16 chr10 13898951 13899258 -131690030 - AluSc SINE Alu -5 304 3 831 176 57 13 chr10 13899358 13899517 -131689771 + FRAM SINE Alu 1 166 0 2260 95 0 13 chr10 13899647 13899952 -131689336 - AluSp SINE Alu -12 301 1 208 261 15 31 chr10 13900014 13900079 -131689209 - L2 LINE L2 -11 3261 3198 2439 54 0 0 chr10 13900152 13900448 -131688840 - AluY SINE Alu -13 298 3 1766 164 6 3 chr10 13900798 13900933 -131688355 + AluJb SINE Alu 1 134 -178 2132 112 7 3 chr10 13900933 13901238 -131688050 + AluSq SINE Alu 1 306 -7 1766 164 6 3 chr10 13901238 13901413 -131687875 + AluJb SINE Alu 134 312 0 2326 60 0 0 chr10 13901644 13901944 -131687344 + AluY SINE Alu 1 300 -11 2184 108 0 0 chr10 13902303 13902608 -131686680 + AluSx SINE Alu 1 305 -7 1631 162 3 27 chr10 13902825 13902998 -131686290 - AluJo SINE Alu -22 290 125 2410 48 3 0 chr10 13902998 13903292 -131685996 + AluY SINE Alu 1 295 -16 1631 162 3 27 chr10 13903292 13903415 -131685873 - AluJo SINE Alu -187 125 1 1999 125 0 0 chr10 13903476 13903771 -131685517 - AluSx SINE Alu -2 310 16 2003 124 3 0 chr10 13904388 13904687 -131684601 + AluSx SINE Alu 1 300 -12 193 264 56 14 chr10 13904911 13904983 -131684305 + L3 LINE CR1 1499 1573 -4 187 333 50 50 chr10 13905050 13905230 -131684058 + L2 LINE L2 2511 2690 -624 2137 123 0 0 chr10 13905291 13905593 -131683695 - AluSx SINE Alu -10 302 1 1597 118 0 4 chr10 13905593 13905822 -131683466 - AluSg/x SINE Alu -9 303 76 2292 98 0 0 chr10 13906069 13906376 -131682912 + AluSx SINE Alu 1 307 -5 1013 197 17 38 chr10 13906474 13906713 -131682575 - AluJo SINE Alu -24 288 55 23 0 0 0 chr10 13906717 13906740 -131682548 + AT_rich Low_complexity Low_complexity 1 23 0 1815 137 44 3 chr10 13906929 13907222 -131682066 - AluSx SINE Alu -7 305 1 760 254 97 89 chr10 13907226 13907349 -131681939 + L1ME3 LINE L1 5083 5203 -959 1503 207 3 10 chr10 13907349 13907649 -131681639 + AluJb SINE Alu 1 298 -14 760 254 97 89 chr10 13907649 13907825 -131681463 + L1ME3 LINE L1 5203 5376 -786 1954 131 3 0 chr10 13907825 13908123 -131681165 + AluSp SINE Alu 1 299 -14 760 254 97 89 chr10 13908123 13908467 -131680821 + L1ME3 LINE L1 5376 5716 -446 2268 90 3 0 chr10 13908467 13908777 -131680511 + AluSp SINE Alu 1 311 -2 760 254 97 89 chr10 13908777 13908909 -131680379 + L1ME3 LINE L1 5716 5868 -294 948 135 0 56 chr10 13908909 13909040 -131680248 + L1MB3 LINE L1 6014 6134 -49 2186 95 3 0 chr10 13909040 13909334 -131679954 - AluSp SINE Alu -18 295 1 948 135 0 56 chr10 13909334 13909380 -131679908 + L1MB3 LINE L1 6134 6181 -2 760 254 97 89 chr10 13909380 13909454 -131679834 + L1ME3 LINE L1 5868 5940 -222 1890 126 7 0 chr10 13909600 13909912 -131679376 - AluSx SINE Alu 0 315 2 721 153 46 30 chr10 13909944 13910075 -131679213 + FLAM_C SINE Alu 1 133 0 1461 209 7 3 chr10 13910089 13910395 -131678893 + AluJo SINE Alu 1 307 -5 29 28 0 0 chr10 13911134 13911170 -131678118 + AT_rich Low_complexity Low_complexity 1 36 0 2605 144 19 16 chr10 13911190 13911621 -131677667 - L1PA16 LINE L1 -8 6158 5727 264 128 21 0 chr10 13911622 13911669 -131677619 + Charlie5 DNA MER1_type 2533 2580 -32 1972 107 0 55 chr10 13911933 13912242 -131677046 - AluSg SINE Alu -18 292 1 180 238 143 60 chr10 13912416 13912500 -131676788 - MIR3 SINE MIR -4 204 114 299 282 215 34 chr10 13912517 13912666 -131676622 - MIR SINE MIR -10 252 77 1425 177 9 47 chr10 13912881 13913203 -131676085 + AluJo SINE Alu 2 311 -1 2063 128 0 0 chr10 13913209 13913506 -131675782 + AluSx SINE Alu 1 297 -15 877 207 149 0 chr10 13913548 13913790 -131675498 - MER33 DNA MER1_type -46 278 1 2345 68 0 3 chr10 13913982 13914275 -131675013 + AluSc SINE Alu 2 293 -16 313 51 0 0 chr10 13914875 13914914 -131674374 + U6 snRNA snRNA 1 39 -68 1109 238 81 36 chr10 13915003 13915360 -131673928 + MLT1A2 LTR MaLR 2 374 0 1163 236 78 0 chr10 13915360 13915602 -131673686 + Tigger7 DNA MER2_type 3 263 -2224 529 196 11 0 chr10 13915647 13915739 -131673549 + Tigger7 DNA MER2_type 2394 2486 -1 634 192 56 8 chr10 13915789 13915914 -131673374 - FLAM_C SINE Alu -11 132 2 25 31 0 0 chr10 13915927 13915959 -131673329 + AT_rich Low_complexity Low_complexity 1 32 0 2121 109 3 13 chr10 13916496 13916807 -131672481 + AluSx SINE Alu 1 308 -4 1748 191 41 26 chr10 13918211 13918556 -131670732 + MLT1A1 LTR MaLR 4 353 -12 3252 134 39 19 chr10 13919132 13919484 -131669804 + MER1A DNA MER1_type 1 368 -2332 2199 105 3 0 chr10 13919484 13919789 -131669499 - AluSp SINE Alu -7 306 1 3252 134 39 19 chr10 13919789 13919952 -131669336 + MER1A DNA MER1_type 368 526 -1 2135 114 0 0 chr10 13920213 13920510 -131668778 + AluSx SINE Alu 3 299 -13 630 241 81 17 chr10 13920642 13920816 -131668472 - MIR SINE MIR 0 262 78 580 143 0 0 chr10 13920828 13920919 -131668369 + AluJb SINE Alu 208 298 -14 214 62 31 0 chr10 13921146 13921178 -131668110 - MER5C DNA MER1_type 0 324 292 2266 78 0 3 chr10 13921182 13921477 -131667811 - AluSg1 SINE Alu -15 294 1 449 267 43 25 chr10 13921521 13921682 -131667606 - MER5C DNA MER1_type -110 214 51 868 132 0 0 chr10 13921712 13921841 -131667447 - FLAM_C SINE Alu 0 133 5 386 320 13 7 chr10 13922055 13922208 -131667080 + MIR SINE MIR 71 224 -38 1491 134 21 124 chr10 13922735 13923115 -131666173 - MLT1B LTR MaLR -49 341 1 1975 148 0 0 chr10 13923284 13923588 -131665700 - AluSx SINE Alu -8 304 1 203 285 160 42 chr10 13924655 13924799 -131664489 + MIR SINE MIR 96 256 -6 824 172 154 0 chr10 13925167 13925336 -131663952 - AluSg/x SINE Alu -23 287 93 1064 195 28 48 chr10 13925481 13925518 -131663770 + MLT1A2 LTR MaLR 129 165 -209 1458 197 7 13 chr10 13925518 13925823 -131663465 + AluSx SINE Alu 1 303 -9 1064 195 28 48 chr10 13925823 13926036 -131663252 + MLT1A2 LTR MaLR 165 374 0 346 253 258 20 chr10 13926342 13926540 -131662748 - MIR SINE MIR -12 250 6 6050 155 18 6 chr10 13926673 13928680 -131660608 + L1PB3 LINE L1 4125 6153 -1 1180 121 6 0 chr10 13928677 13928851 -131660437 + L1MA7 LINE L1 5413 5587 -725 * 1006 109 195 226 chr10 13928851 13929338 -131659950 + LTR12 LTR ERV1 9 480 -234 3749 143 42 42 chr10 13929340 13929668 -131659620 + L1MA7 LINE L1 5576 5903 -388 2283 95 3 0 chr10 13929668 13929974 -131659314 - AluSx SINE Alu -5 307 1 3749 143 42 42 chr10 13929974 13930361 -131658927 + L1MA7 LINE L1 5902 6291 0 4369 161 19 18 chr10 13930380 13930596 -131658692 + L1MB7 LINE L1 5384 5598 -586 1700 148 49 0 chr10 13930596 13930880 -131658408 + AluJo SINE Alu 1 298 -14 4369 161 19 18 chr10 13930880 13931448 -131657840 + L1MB7 LINE L1 5598 6169 -15 296 230 133 9 chr10 13931461 13931574 -131657714 - L1ME4a LINE L1 -51 6070 5944 690 243 39 6 chr10 13932446 13932627 -131656661 - MER5A DNA MER1_type -2 187 1 1916 108 0 0 chr10 13932861 13933121 -131656167 + AluSx SINE Alu 39 298 -14 2216 92 0 0 chr10 13933217 13933511 -131655777 - AluSc SINE Alu -15 294 1 990 271 36 12 chr10 13933682 13933933 -131655355 + MIR SINE MIR 6 262 0 342 317 127 28 chr10 13934066 13934208 -131655080 + MIR SINE MIR 17 172 -90 1083 78 14 0 chr10 13934210 13934351 -131654937 + MLT2A2 LTR ERVL 1 143 -310 223 206 27 41 chr10 13934487 13934560 -131654728 + CT-rich Low_complexity Low_complexity 4 75 0 1422 196 26 26 chr10 13936164 13936475 -131652813 - AluJo SINE Alu 0 312 2 825 138 8 8 chr10 13936495 13936625 -131652663 - FLAM_C SINE Alu -12 131 2 335 296 98 15 chr10 13937088 13937220 -131652068 - L1ME4a LINE L1 -233 5888 5746 292 327 109 19 chr10 13938644 13938800 -131650488 - MIR3 SINE MIR -9 199 30 25 65 0 0 chr10 13939622 13939668 -131649620 + AT_rich Low_complexity Low_complexity 1 46 0 276 30 0 0 chr10 13941352 13941385 -131647903 + (TTCA)n Simple_repeat Simple_repeat 2 34 0 181 286 98 53 chr10 13941655 13941788 -131647500 + L2 LINE L2 3079 3217 -96 2113 85 37 0 chr10 13942435 13942730 -131646558 + AluSg SINE Alu 1 306 -4 2009 117 0 13 chr10 13943748 13944055 -131645233 + AluSg SINE Alu 1 303 -7 1196 235 52 42 chr10 13944182 13944651 -131644637 - THE1C LTR MaLR 0 375 1 1514 164 35 35 chr10 13944700 13944813 -131644475 + AluJo SINE Alu 1 113 -199 2310 96 0 0 chr10 13944813 13945115 -131644173 - AluSx SINE Alu -10 302 1 1514 164 35 35 chr10 13945115 13945312 -131643976 + AluJo SINE Alu 112 311 -1 2391 87 0 0 chr10 13945606 13945916 -131643372 - AluSg SINE Alu 0 310 1 288 189 268 8 chr10 13945955 13946082 -131643206 + L1ME4a LINE L1 5962 6121 0 2115 78 28 0 chr10 13946732 13947014 -131642274 - AluSp SINE Alu -23 290 1 349 59 78 0 chr10 13947075 13947126 -131642162 - MLT2A2 LTR ERVL 0 453 399 347 277 0 43 chr10 13947128 13947222 -131642066 + L1MC4 LINE L1 6614 6703 -1339 325 359 0 0 chr10 13947144 13947236 -131642052 - L1MC4 LINE L1 -1337 6705 6614 * 607 85 0 0 chr10 13947248 13947330 -131641958 - MLT2A1 LTR ERVL -40 404 323 2575 46 0 13 chr10 13948318 13948623 -131640665 - AluY SINE Alu -10 301 1 508 197 49 115 chr10 13948965 13949148 -131640140 + MIR3 SINE MIR 27 197 -11 229 310 23 0 chr10 13949509 13949596 -131639692 - MIR3 SINE MIR -11 197 109 2248 24 0 0 chr10 13951042 13951289 -131637999 - AluY SINE Alu -5 306 60 2232 46 8 0 chr10 13952235 13952496 -131636792 + AluY SINE Alu 38 300 -11 440 285 140 6 chr10 13952828 13953007 -131636281 - MIR SINE MIR 0 262 60 489 101 0 119 chr10 13953436 13953451 -131635837 - FLAM_A SINE Alu -181 130 115 219 36 0 0 chr10 13953451 13953479 -131635809 + (TG)n Simple_repeat Simple_repeat 2 29 0 489 101 0 119 chr10 13953479 13953572 -131635716 - FLAM_A SINE Alu -196 115 35 396 86 17 0 chr10 13953572 13953630 -131635658 - L1M2 LINE L1 -695 5605 5547 2157 20 12 0 chr10 13953681 13953932 -131635356 - L1PA4 LINE L1 -1 6154 5901 377 320 47 0 chr10 13955854 13956004 -131633284 + L1ME LINE L1 5513 5669 -452 382 158 0 0 chr10 13956335 13956392 -131632896 + MER2 DNA MER2_type 29 85 -260 1467 174 66 4 chr10 13956392 13956507 -131632781 + AluJo SINE Alu 1 107 -205 225 65 0 0 chr10 13956507 13956538 -131632750 + (CAAT)n Simple_repeat Simple_repeat 4 34 0 1467 174 66 4 chr10 13956538 13956680 -131632608 + AluJo SINE Alu 107 274 -38 418 214 0 0 chr10 13956782 13956852 -131632436 + MER2 DNA MER2_type 268 337 -8 2193 103 0 0 chr10 13956958 13957276 -131632012 + AluSx SINE Alu 1 318 0 249 316 31 10 chr10 13959070 13959168 -131630120 - MIR3 SINE MIR -1 207 108 207 244 0 0 chr10 13959861 13959906 -131629382 + L2 LINE L2 3227 3271 -1 290 233 14 0 chr10 13960503 13960576 -131628712 + L2 LINE L2 3240 3313 0 614 306 32 19 chr10 13961614 13961830 -131627458 - MIR SINE MIR -4 258 40 2397 100 6 0 chr10 13961872 13962183 -131627105 - AluSp SINE Alu 0 313 1 2055 118 40 7 chr10 13962308 13962604 -131626684 + AluSx SINE Alu 1 306 -6 28 29 0 0 chr10 13962738 13962773 -131626515 + AT_rich Low_complexity Low_complexity 1 35 0 2332 93 0 3 chr10 13962982 13963284 -131626004 - AluSc SINE Alu -8 301 1 21 0 0 0 chr10 13963478 13963499 -131625789 + AT_rich Low_complexity Low_complexity 1 21 0 666 267 91 22 chr10 13963535 13963767 -131625521 - MIR SINE MIR 0 262 15 219 69 0 0 chr10 13964046 13964075 -131625213 + (TTA)n Simple_repeat Simple_repeat 1 29 0 309 258 0 22 chr10 13964403 13964492 -131624796 - MIR SINE MIR -3 259 173 2244 129 0 0 chr10 13965291 13965601 -131623687 - AluSx SINE Alu -2 310 1 1234 123 0 0 chr10 13965660 13965830 -131623458 + AluSg/x SINE Alu 133 302 -10 557 232 27 92 chr10 13968572 13968634 -131620654 + MER5B DNA MER1_type 1 65 -113 2519 78 0 0 chr10 13968634 13968943 -131620345 + AluSc SINE Alu 1 309 0 557 232 27 92 chr10 13968943 13969065 -131620223 + MER5B DNA MER1_type 65 173 -5 2502 65 0 0 chr10 13969877 13970169 -131619119 + AluSp SINE Alu 1 292 -21 2113 145 0 3 chr10 13970780 13971091 -131618197 - AluSx SINE Alu -2 310 1 2333 96 10 6 chr10 13973807 13974119 -131615169 + AluSp SINE Alu 1 313 0 1900 155 3 0 chr10 13974283 13974574 -131614714 + AluJb SINE Alu 5 296 -16 195 139 0 0 chr10 13974755 13974791 -131614497 + (TA)n Simple_repeat Simple_repeat 2 37 0 2102 112 4 0 chr10 13976150 13976453 -131612835 + AluSx SINE Alu 6 309 0 2005 219 80 14 chr10 13977788 13978286 -131611002 - MER54A LTR ERVL 0 901 371 183 288 137 52 chr10 13979558 13979711 -131609577 - L2 LINE L2 -801 2513 2348 323 133 217 0 chr10 13980520 13980580 -131608708 + L1MB4 LINE L1 6031 6103 -77 499 312 163 14 chr10 13982878 13983416 -131605872 + L1MC4a LINE L1 5259 5800 -321 2230 106 0 7 chr10 13983677 13983969 -131605319 + AluSx SINE Alu 1 290 -22 629 118 49 0 chr10 13983992 13984094 -131605194 - HY1 scRNA scRNA -4 108 2 197 234 124 73 chr10 13984487 13984624 -131604664 - MIR SINE MIR -12 250 107 936 159 0 0 chr10 13984927 13985065 -131604223 + FAM SINE Alu 35 172 -13 182 135 54 0 chr10 13985345 13985382 -131603906 + L2 LINE L2 1751 1789 -1525 750 219 14 117 chr10 13985730 13986013 -131603275 + MER112 DNA MER1_type 1 254 -6 529 296 207 10 chr10 13986126 13986522 -131602766 + L2 LINE L2 2246 2719 -595 304 263 11 21 chr10 13986648 13986743 -131602545 + MER5B DNA MER1_type 4 97 -81 267 269 106 0 chr10 13988867 13988971 -131600317 - L2 LINE L2 0 3313 3199 2091 129 3 0 chr10 13989225 13989520 -131599768 + AluSx SINE Alu 1 296 -16 188 235 0 20 chr10 13989520 13989571 -131599717 - L2 LINE L2 -6 3307 3258 1045 156 39 6 chr10 13989847 13990027 -131599261 - AluJb SINE Alu -12 300 115 1678 144 34 0 chr10 13990268 13990532 -131598756 + AluJo SINE Alu 17 289 -23 295 324 60 0 chr10 13990974 13991156 -131598132 - MER91A DNA MER1_type -1 195 3 180 331 47 74 chr10 13991671 13991819 -131597469 - L2 LINE L2 -26 3246 3103 2653 45 0 13 chr10 13991972 13992286 -131597002 + AluY SINE Alu 1 310 -1 208 270 210 10 chr10 13992427 13992527 -131596761 - MIR SINE MIR -73 135 16 231 266 181 20 chr10 13992844 13993043 -131596245 + MIR SINE MIR 2 232 -30 256 242 72 53 chr10 13993406 13993569 -131595719 + MIR SINE MIR 30 192 -62 327 285 228 5 chr10 13994020 13994213 -131595075 + MIR SINE MIR 14 249 -13 192 167 33 67 chr10 13994869 13994929 -131594359 + L2 LINE L2 3256 3313 0 428 295 78 16 chr10 13995567 13995760 -131593528 + MIR SINE MIR 40 244 -18 2460 91 0 3 chr10 13997143 13997450 -131591838 + AluSq SINE Alu 3 308 -5 2611 233 69 46 chr10 13998322 13998869 -131590419 - L1ME3 LINE L1 -9 6153 5577 2233 122 0 3 chr10 13998869 13999172 -131590116 - AluSx SINE Alu -10 302 1 2611 233 69 46 chr10 13999172 13999474 -131589814 - L1ME3 LINE L1 -585 5577 5284 2283 95 0 3 chr10 13999474 13999769 -131589519 + AluSq SINE Alu 1 294 -19 225 148 93 0 chr10 13999772 13999826 -131589462 + HSMAR1 DNA Mariner 1 59 -1228 1263 202 53 116 chr10 14000003 14000514 -131588774 - MLT1D LTR MaLR 0 505 27 307 298 43 0 chr10 14000945 14001039 -131588249 + MIR SINE MIR 1 98 -164 332 229 30 69 chr10 14001081 14001212 -131588076 - LTR41 LTR ERVL -49 724 599 294 239 87 0 chr10 14001623 14001715 -131587573 + MIR SINE MIR 114 213 -49 2222 118 3 10 chr10 14001875 14002189 -131587099 + AluSx SINE Alu 1 312 0 634 244 54 32 chr10 14002381 14002602 -131586686 - L2 LINE L2 0 3313 3088 3242 78 93 82 chr10 14002619 14002929 -131586359 + MER41A LTR ERV1 1 321 -233 2636 54 0 13 chr10 14002929 14003243 -131586045 + AluY SINE Alu 1 310 -1 3242 78 93 82 chr10 14003243 14003480 -131585808 + MER41A LTR ERV1 321 554 0 225 108 0 0 chr10 14003501 14003538 -131585750 + (TGG)n Simple_repeat Simple_repeat 2 38 0 358 73 18 0 chr10 14003826 14003881 -131585407 - AluSp/q SINE Alu -74 229 174 2235 82 3 10 chr10 14004536 14004827 -131584461 - AluSx SINE Alu -2 310 22 2042 153 0 0 chr10 14005205 14005505 -131583783 - AluSx SINE Alu -12 300 1 298 333 58 0 chr10 14007957 14008095 -131581193 - MIR SINE MIR -44 218 73 644 154 0 10 chr10 14009486 14009590 -131579698 - FLAM_A SINE Alu -12 130 28 269 306 79 91 chr10 14009910 14010263 -131579025 - L2 LINE L2 0 3272 2924 761 289 159 53 chr10 14010289 14010504 -131578784 + L1MEd LINE L1 213 404 -5715 2282 108 0 0 chr10 14010504 14010799 -131578489 + AluSx SINE Alu 1 295 -17 761 289 159 53 chr10 14010799 14011230 -131578058 + L1MEd LINE L1 404 788 -5331 2541 104 28 3 chr10 14011230 14011585 -131577703 - THE1B LTR MaLR 0 364 1 761 289 159 53 chr10 14011585 14011865 -131577423 + L1MEd LINE L1 788 1239 -4880 776 102 94 8 chr10 14012176 14012303 -131576985 + MER85 DNA T2_type 2 139 0 312 215 74 60 chr10 14012557 14012761 -131576527 + L1 LINE L1 4904 5110 -1036 426 340 100 8 chr10 14012886 14013265 -131576023 + L1ME LINE L1 5272 5685 -485 226 259 0 0 chr10 14014001 14014059 -131575229 + L2 LINE L2 3000 3057 -215 2081 127 10 0 chr10 14015335 14015627 -131573661 + AluSx SINE Alu 1 295 -17 198 103 0 0 chr10 14016905 14016934 -131572354 + (TTCC)n Simple_repeat Simple_repeat 4 32 0 200 345 26 17 chr10 14016935 14017051 -131572237 - L2 LINE L2 -18 3295 3179 364 295 16 23 chr10 14017072 14017201 -131572087 - MER94 DNA DNA -5 129 2 2238 102 0 0 chr10 14018546 14018830 -131570458 - AluSc SINE Alu -25 284 1 590 260 73 0 chr10 14019257 14019434 -131569854 - MER91B DNA MER1_type 0 190 1 182 315 0 0 chr10 14020077 14020131 -131569157 + L2 LINE L2 2998 3051 -262 408 240 110 20 chr10 14023151 14023297 -131565991 + MER5A DNA MER1_type 31 189 0 337 294 32 16 chr10 14024037 14024163 -131565125 + MIR SINE MIR 29 156 -106 21 0 0 0 chr10 14025150 14025171 -131564117 + AT_rich Low_complexity Low_complexity 1 21 0 635 223 126 49 chr10 14026131 14026559 -131562729 - LTR48 LTR ERV1 0 787 128 423 287 0 26 chr10 14026532 14026647 -131562641 - MER34 LTR ERV1 -430 112 1 * 23 0 0 0 chr10 14026892 14026915 -131562373 + AT_rich Low_complexity Low_complexity 1 23 0 2149 119 0 7 chr10 14027236 14027538 -131561750 - AluSx SINE Alu -12 300 1 1086 288 113 19 chr10 14077763 14078401 -131510887 - L1MEc LINE L1 -4722 1674 977 374 216 0 9 chr10 14078477 14078593 -131510695 + CT-rich Low_complexity Low_complexity 4 118 0 648 286 9 74 chr10 14078596 14078921 -131510367 - L1MEc LINE L1 -6015 381 78 2137 128 7 0 chr10 14079215 14079512 -131509776 + AluSx SINE Alu 1 299 -13 383 312 105 55 chr10 14079707 14080268 -131509020 - L1 LINE L1 -1756 4390 3858 213 94 0 0 chr10 14080268 14080300 -131508988 + (TG)n Simple_repeat Simple_repeat 2 33 0 2011 130 0 0 chr10 14080300 14080584 -131508704 - AluY SINE Alu -27 284 1 383 312 105 55 chr10 14080584 14080789 -131508499 - L1 LINE L1 -2287 3859 3585 6014 177 59 65 chr10 14080812 14081356 -131507932 + Charlie1a DNA MER1_type 49 595 -2166 4958 65 22 0 chr10 14081356 14081955 -131507333 - L1PA7 LINE L1 0 6154 5543 6014 177 59 65 chr10 14081955 14082125 -131507163 + Charlie1a DNA MER1_type 595 764 -1997 2078 114 38 0 chr10 14082125 14082415 -131506873 + AluSx SINE Alu 1 301 -11 6014 177 59 65 chr10 14082415 14083108 -131506180 + Charlie1a DNA MER1_type 764 1449 -6 304 294 78 39 chr10 14083132 14083398 -131505890 - L1 LINE L1 -2573 3573 3292 2344 109 3 0 chr10 14083398 14083709 -131505579 - AluSx SINE Alu 0 312 1 304 294 78 39 chr10 14083709 14083751 -131505537 - L1 LINE L1 -2854 3292 3253 2297 113 0 0 chr10 14084043 14084345 -131504943 - AluSq SINE Alu -9 304 3 764 258 56 30 chr10 14084548 14084815 -131504473 - LTR16A LTR ERVL -58 392 119 341 234 32 32 chr10 14084970 14085064 -131504224 - HsTC2 DNA Tc2 -1804 94 1 1409 189 47 17 chr10 14085290 14085591 -131503697 + MER63C DNA MER1_type 1 310 -620 834 168 114 0 chr10 14085986 14086135 -131503153 - MER5A DNA MER1_type 0 189 24 2046 131 0 0 chr10 14086398 14086680 -131502608 + AluSx SINE Alu 1 282 -30 1452 177 13 55 chr10 14087829 14088139 -131501149 + AluJo SINE Alu 7 303 -9 993 174 40 5 chr10 14088381 14088582 -131500706 + MER63C DNA MER1_type 277 484 -446 1857 123 0 0 chr10 14088584 14088836 -131500452 + AluSx SINE Alu 37 288 -24 21 0 0 0 chr10 14088839 14088860 -131500428 + AT_rich Low_complexity Low_complexity 1 21 0 431 242 32 48 chr10 14088860 14088984 -131500304 + MER20 DNA MER1_type 1 122 -97 519 118 147 10 chr10 14089030 14089132 -131500156 + MER63C DNA MER1_type 480 595 -335 2415 153 53 79 chr10 14089133 14089348 -131499940 + MLT2B2 LTR ERVL 1 220 -295 706 143 76 0 chr10 14089348 14089467 -131499821 - FLAM_C SINE Alu -5 128 1 2415 153 53 79 chr10 14089467 14089780 -131499508 + MLT2B2 LTR ERVL 220 515 0 1328 230 44 0 chr10 14089780 14090091 -131499197 + MER63C DNA MER1_type 592 916 -14 906 254 0 0 chr10 14090477 14090666 -131498622 + MER5A DNA MER1_type 1 189 0 858 243 44 47 chr10 14091259 14091597 -131497691 - L1ME4a LINE L1 -69 6052 5716 879 189 0 0 chr10 14091603 14091756 -131497532 - FRAM SINE Alu -11 165 13 2374 79 23 0 chr10 14091882 14092186 -131497102 - AluSx SINE Alu -1 311 1 2146 117 0 0 chr10 14092655 14092964 -131496324 - AluSx SINE Alu 0 309 1 3514 139 19 3 chr10 14094253 14094843 -131494445 + MER51C LTR ERV1 1 639 -1 2247 70 35 0 chr10 14095063 14095349 -131493939 + AluSx SINE Alu 2 297 -15 1167 126 6 0 chr10 14095356 14095531 -131493757 + FRAM SINE Alu 1 174 -2 888 164 13 19 chr10 14095747 14095906 -131493382 - Charlie1a DNA MER1_type -4 1451 1294 * 2392 184 68 17 chr10 14095890 14096432 -131492856 - Charlie1a DNA MER1_type -629 826 257 698 239 72 11 chr10 14096449 14096629 -131492659 - Charlie1a DNA MER1_type -1249 206 16 23 0 0 0 chr10 14097078 14097101 -131492187 + AT_rich Low_complexity Low_complexity 1 23 0 2272 71 27 17 chr10 14097251 14097380 -131491908 + AluY SINE Alu 1 127 -184 180 0 0 0 chr10 14097380 14097400 -131491888 + (TA)n Simple_repeat Simple_repeat 2 21 0 2272 71 27 17 chr10 14097400 14097566 -131491722 + AluY SINE Alu 127 299 -12 494 246 30 22 chr10 14097646 14097780 -131491508 - MIR SINE MIR -112 150 16 191 291 127 27 chr10 14097955 14098065 -131491223 - MIR SINE MIR -122 140 20 616 266 57 13 chr10 14099803 14100032 -131489256 + L1M4 LINE L1 4745 4983 -1163 374 327 203 22 chr10 14100203 14100898 -131488390 - L2 LINE L2 -1252 2062 1242 4390 183 157 20 chr10 14100955 14102196 -131487092 - Charlie1a DNA MER1_type -8 1447 37 244 288 67 34 chr10 14102454 14102633 -131486655 + MIR SINE MIR 9 191 -51 371 287 99 86 chr10 14103022 14103336 -131485952 - L1MC4 LINE L1 -395 7647 7330 496 212 35 0 chr10 14103690 14103803 -131485485 + AluJb SINE Alu 191 307 -5 23 0 0 0 chr10 14104723 14104746 -131484542 + AT_rich Low_complexity Low_complexity 1 23 0 23 33 0 0 chr10 14105497 14105527 -131483761 + AT_rich Low_complexity Low_complexity 1 30 0 30 27 0 0 chr10 14107547 14107584 -131481704 + AT_rich Low_complexity Low_complexity 1 37 0 619 269 57 66 chr10 14107646 14107698 -131481590 - L1ME4a LINE L1 -296 5825 5774 2322 107 0 13 chr10 14107698 14108008 -131481280 - AluSx SINE Alu -6 306 1 619 269 57 66 chr10 14108008 14108304 -131480984 - L1ME4a LINE L1 -347 5774 5480 430 258 132 6 chr10 14108618 14108777 -131480511 + MIR SINE MIR 84 262 0 510 272 55 85 chr10 14108793 14109252 -131480036 - L1MC/D LINE L1 -2032 5776 5332 1882 146 3 0 chr10 14109672 14109959 -131479329 - AluSx SINE Alu -24 288 1 243 0 0 0 chr10 14110222 14110249 -131479039 + (TGG)n Simple_repeat Simple_repeat 2 28 0 239 371 67 9 chr10 14110275 14110380 -131478908 - L3b LINE CR1 -1 1582 1472 1017 275 140 32 chr10 14110619 14111142 -131478146 + L3 LINE CR1 997 1575 -2 21 0 0 0 chr10 14111353 14111374 -131477914 + AT_rich Low_complexity Low_complexity 1 21 0 2364 73 7 3 chr10 14112229 14112530 -131476758 + AluSc SINE Alu 1 302 -7 1556 208 162 81 chr10 14112816 14112931 -131476357 - L1ME2 LINE L1 -32 6132 6028 1038 86 40 0 chr10 14112931 14113082 -131476206 + L1PA11 LINE L1 6014 6170 -4 1556 208 162 81 chr10 14113082 14113382 -131475906 - L1ME2 LINE L1 -136 6028 5754 2509 79 0 0 chr10 14113382 14113686 -131475602 + AluSc SINE Alu 1 304 -5 1556 208 162 81 chr10 14113686 14114009 -131475279 - L1ME2 LINE L1 -410 5754 5333 871 211 0 0 chr10 14114010 14114166 -131475122 - AluJb SINE Alu -3 309 154 760 199 24 127 chr10 14114168 14114358 -131474930 - L1ME2 LINE L1 -816 5330 5195 1508 154 28 0 chr10 14114358 14114605 -131474683 - AluJo SINE Alu -25 287 34 760 199 24 127 chr10 14114605 14114785 -131474503 - L1ME2 LINE L1 -951 5195 4998 480 212 171 0 chr10 14114784 14114954 -131474334 - L1ME2 LINE L1 -3399 2747 2549 * 225 179 0 0 chr10 14114954 14114993 -131474295 - MLT1H1 LTR MaLR -6 549 511 315 400 30 4 chr10 14115719 14115954 -131473334 + MIR SINE MIR 12 252 -10 468 303 117 6 chr10 14116197 14116359 -131472929 - MIR SINE MIR -78 184 5 318 272 98 36 chr10 14117454 14117838 -131471450 - L1ME2 LINE L1 -280 5884 5461 806 171 24 0 chr10 14118161 14118325 -131470963 - L1MB7 LINE L1 0 6184 6017 2274 117 0 0 chr10 14118813 14119111 -131470177 - AluSq SINE Alu -15 298 1 1645 143 81 7 chr10 14119212 14119362 -131469926 - AluSx SINE Alu -20 292 154 224 30 30 0 chr10 14119362 14119395 -131469893 + (TTTA)n Simple_repeat Simple_repeat 1 34 0 1645 143 81 7 chr10 14119395 14119516 -131469772 - AluSx SINE Alu -158 154 1 782 150 133 23 chr10 14119554 14119727 -131469561 - AluJo SINE Alu -4 308 117 568 343 98 35 chr10 14124799 14125277 -131464011 + L3 LINE CR1 398 917 -660 1875 163 40 0 chr10 14125277 14125577 -131463711 + AluJo SINE Alu 1 312 0 568 343 98 35 chr10 14125577 14125646 -131463642 + L3 LINE CR1 917 980 -597 415 259 0 0 chr10 14125668 14125749 -131463539 + L2 LINE L2 3233 3313 0 1698 147 58 25 chr10 14125842 14126168 -131463120 - MER1B DNA MER1_type 0 337 1 254 156 31 16 chr10 14126256 14126320 -131462968 - L1MD2 LINE L1 -1 6358 6294 406 210 56 68 chr10 14126695 14126857 -131462431 - Charlie8 DNA MER1_type -2218 199 40 478 242 242 0 chr10 14127070 14127248 -131462040 - MER58A DNA MER1_type 0 224 4 557 197 69 64 chr10 14127403 14127606 -131461682 - L1ME3 LINE L1 -44 6118 5915 821 310 68 2 chr10 14128138 14128535 -131460753 + LTR33 LTR ERVL 20 442 -79 2531 46 0 10 chr10 14129848 14130152 -131459136 + AluY SINE Alu 1 301 -10 361 68 85 0 chr10 14130849 14130908 -131458380 - L1MB2 LINE L1 -7 6164 6101 1703 152 35 10 chr10 14130919 14131209 -131458079 - AluSx SINE Alu -15 297 1 1786 266 127 30 chr10 14131534 14131983 -131457305 + HAL1 LINE L1 520 924 -1583 1727 132 82 0 chr10 14131983 14132263 -131457025 + AluJo SINE Alu 1 303 -9 1786 266 127 30 chr10 14132263 14132844 -131456444 + HAL1 LINE L1 924 1650 -857 473 279 71 7 chr10 14132912 14133052 -131456236 - MIR SINE MIR -80 182 34 564 258 145 59 chr10 14133081 14133710 -131455578 + HAL1 LINE L1 1753 2435 -72 1141 260 43 11 chr10 14133765 14134115 -131455173 + L2 LINE L2 2444 2804 -510 618 277 41 23 chr10 14134103 14134323 -131454965 + L2 LINE L2 3084 3307 -6 * 1318 169 113 3 chr10 14135265 14135567 -131453721 + MER2 DNA MER2_type 1 335 -10 939 312 129 23 chr10 14135683 14136289 -131452999 + L3 LINE CR1 433 1102 -475 596 278 30 48 chr10 14136542 14136646 -131452642 - L1ME3 LINE L1 -223 5947 5843 991 154 19 43 chr10 14136646 14136854 -131452434 - MER105 DNA DNA -1 203 1 596 278 30 48 chr10 14136854 14137083 -131452205 - L1ME3 LINE L1 -327 5843 5620 247 260 130 13 chr10 14137085 14137162 -131452126 + L3 LINE CR1 1092 1177 -400 31 0 0 0 chr10 14137669 14137700 -131451588 + AT_rich Low_complexity Low_complexity 1 31 0 568 275 103 24 chr10 14138270 14138520 -131450768 + MIR SINE MIR 3 261 -1 2370 60 0 0 chr10 14138991 14139272 -131450016 + AluY SINE Alu 1 281 -30 470 237 136 35 chr10 14141581 14141809 -131447479 + MER112 DNA MER1_type 8 258 -2 5841 98 3 6 chr10 14141809 14142681 -131446607 - L1PA11 LINE L1 -2 6172 5303 1945 141 11 0 chr10 14143072 14143356 -131445932 + AluJb SINE Alu 1 287 -25 392 196 131 80 chr10 14143517 14143716 -131445572 - L1ME3A LINE L1 -8 6162 5954 533 142 92 8 chr10 14143738 14143858 -131445430 - L1MB8 LINE L1 -24 6154 6025 1267 232 129 46 chr10 14143875 14144547 -131444741 - L1ME3A LINE L1 -216 5946 5206 316 291 47 58 chr10 14144867 14145220 -131444068 + MLT1L LTR MaLR 1 349 -162 195 42 0 0 chr10 14145227 14145251 -131444037 + (T)n Simple_repeat Simple_repeat 1 24 0 1939 209 39 50 chr10 14145294 14145812 -131443476 - MLT2B1 LTR ERVL -8 512 1 1014 248 198 7 chr10 14146644 14147204 -131442084 + LTR50 LTR ERVL 2 668 -127 224 204 51 92 chr10 14148034 14148132 -131441156 + L2 LINE L2 3142 3235 -78 2220 237 53 43 chr10 14148138 14148831 -131440457 - L2 LINE L2 -819 2495 1796 24 32 0 0 chr10 14153111 14153142 -131436146 + AT_rich Low_complexity Low_complexity 1 31 0 454 248 153 19 chr10 14154095 14154252 -131435036 - MER5B DNA MER1_type 0 178 1 245 231 0 51 chr10 14157177 14157255 -131432033 + (TATG)n Simple_repeat Simple_repeat 2 75 0 287 232 14 0 chr10 14157947 14158016 -131431272 - MER5A DNA MER1_type -87 102 33 1434 113 96 29 chr10 14158245 14158485 -131430803 + AluSx SINE Alu 36 291 -21 777 209 11 39 chr10 14159542 14159724 -131429564 - MER5A DNA MER1_type 0 189 13 418 332 100 26 chr10 14159732 14159961 -131429327 + MIR SINE MIR 9 254 -8 1754 120 76 0 chr10 14160053 14160303 -131428985 + AluSx SINE Alu 21 289 -23 1507 185 67 20 chr10 14162728 14163026 -131426262 + AluJo SINE Alu 1 312 0 2313 119 0 3 chr10 14163462 14163773 -131425515 + AluSx SINE Alu 1 310 -2 186 208 0 0 chr10 14165570 14165618 -131423670 + (CAAGC)n Simple_repeat Simple_repeat 4 51 0 276 228 174 65 chr10 14165817 14165909 -131423379 + L2 LINE L2 3212 3313 0 214 200 0 0 chr10 14167201 14167241 -131422047 + (TTA)n Simple_repeat Simple_repeat 1 40 0 1661 133 82 14 chr10 14167786 14168065 -131421223 + AluJb SINE Alu 1 298 -14 232 344 12 28 chr10 14168901 14169078 -131420210 - MIR SINE MIR -59 149 19 1058 152 1 111 chr10 14169519 14169564 -131419724 - L1MB3 LINE L1 -6 6177 6129 938 219 18 0 chr10 14169564 14169733 -131419555 - FAM SINE Alu -3 172 1 2277 89 38 0 chr10 14169740 14170031 -131419257 - AluSp SINE Alu -11 302 1 1058 152 1 111 chr10 14170031 14170256 -131419032 - L1MB3 LINE L1 -60 6123 5930 2269 123 3 0 chr10 14171760 14172070 -131417218 - AluSx SINE Alu -1 311 1 364 302 47 8 chr10 14173767 14173896 -131415392 - MIR SINE MIR -4 258 125 2146 106 19 32 chr10 14173915 14174227 -131415061 - AluSx SINE Alu -4 308 1 207 0 0 0 chr10 14174630 14174653 -131414635 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 198 103 0 0 chr10 14175408 14175437 -131413851 + (CA)n Simple_repeat Simple_repeat 2 30 0 206 205 48 121 chr10 14175637 14175720 -131413568 - L2 LINE L2 -1 3312 3236 * 244 308 0 13 chr10 14175691 14175769 -131413519 - MIR SINE MIR -169 93 17 2355 98 0 7 chr10 14175987 14176284 -131413004 + AluSx SINE Alu 1 295 -17 277 329 13 0 chr10 14176864 14176943 -131412345 + (TG)n Simple_repeat Simple_repeat 1 80 0 2071 138 27 0 chr10 14178584 14178882 -131410406 - AluJb SINE Alu -6 306 1 2231 102 10 0 chr10 14180220 14180515 -131408773 - AluSx SINE Alu -14 298 1 256 306 170 7 chr10 14180563 14180710 -131408578 - L1ME4a LINE L1 -2 6119 5949 280 342 33 26 chr10 14180881 14181033 -131408255 + L3b LINE CR1 1316 1468 -115 2379 69 6 41 chr10 14181069 14181389 -131407899 - AluSq SINE Alu -4 309 1 377 278 169 12 chr10 14181475 14181730 -131407558 + L1M4 LINE L1 4375 4669 -1477 212 325 146 16 chr10 14182167 14182290 -131406998 - L3b LINE CR1 -320 1263 1125 230 266 17 17 chr10 14183227 14183313 -131405975 + MIR SINE MIR 30 115 -93 1900 142 53 0 chr10 14183599 14183937 -131405351 - L1MA5A LINE L1 -3 6294 5939 2200 115 3 19 chr10 14183956 14184270 -131405018 + AluSg1 SINE Alu 1 309 0 333 0 0 0 chr10 14184288 14184325 -131404963 + (CA)n Simple_repeat Simple_repeat 2 38 0 884 124 23 0 chr10 14184988 14185117 -131404171 + AluJb SINE Alu 1 132 -180 2152 109 3 26 chr10 14185259 14185571 -131403717 + AluSg SINE Alu 1 305 -5 789 148 55 0 chr10 14185579 14185707 -131403581 + AluJo SINE Alu 2 136 -176 208 292 180 19 chr10 14185731 14185892 -131403396 + MIR3 SINE MIR 19 205 -3 291 114 0 0 chr10 14186361 14186405 -131402883 + (TA)n Simple_repeat Simple_repeat 2 45 0 631 316 42 0 chr10 14186518 14186736 -131402552 + MIR SINE MIR 37 262 0 1600 187 3 17 chr10 14186751 14187040 -131402248 + AluJo SINE Alu 1 285 -27 2346 104 0 28 chr10 14187303 14187621 -131401667 - AluSg SINE Alu -1 309 1 180 328 0 0 chr10 14187637 14187695 -131401593 - MIR SINE MIR -170 92 35 1022 70 23 0 chr10 14187869 14187997 -131401291 - AluSg/x SINE Alu -49 263 133 1741 178 0 38 chr10 14188116 14188430 -131400858 + AluJo SINE Alu 1 302 -10 2359 88 14 0 chr10 14188526 14188822 -131400466 - AluSx SINE Alu -12 300 1 853 113 40 0 chr10 14190500 14190624 -131398664 + FRAM SINE Alu 26 154 -22 2035 124 0 17 chr10 14191822 14192120 -131397168 + AluSx SINE Alu 1 293 -19 3624 42 0 0 chr10 14192934 14193368 -131395920 + L1PA4 LINE L1 5719 6152 -3 1765 168 44 13 chr10 14193518 14193816 -131395472 - AluSg SINE Alu -3 307 1 2044 112 4 0 chr10 14194125 14194393 -131394895 - AluSx SINE Alu -37 275 7 459 223 65 14 chr10 14194425 14194564 -131394724 - MER69 DNA AcHobo -1079 147 2 1808 124 20 36 chr10 14194817 14195123 -131394165 - AluJb SINE Alu -11 301 1 189 232 138 80 chr10 14195137 14195275 -131394013 + L2 LINE L2 2339 2484 -830 1462 141 33 0 chr10 14196600 14196813 -131392475 + AluJo SINE Alu 85 304 -8 2208 110 14 0 chr10 14197098 14197390 -131391898 - AluSx SINE Alu -16 296 1 375 273 67 77 chr10 14198368 14198410 -131390878 + MIR SINE MIR 16 57 -205 1953 125 7 30 chr10 14198410 14198707 -131390581 + AluSx SINE Alu 1 290 -22 375 273 67 77 chr10 14198707 14198858 -131390430 + MIR SINE MIR 57 207 -55 2043 122 30 10 chr10 14199102 14199397 -131389891 - AluSx SINE Alu -11 301 1 220 214 0 0 chr10 14200037 14200079 -131389209 + GA-rich Low_complexity Low_complexity 1 42 0 2006 121 0 65 chr10 14201004 14201326 -131387962 - AluSx SINE Alu -11 301 1 902 132 0 22 chr10 14202061 14202197 -131387091 - FLAM_C SINE Alu 0 133 1 225 0 0 0 chr10 14202770 14202795 -131386493 + (T)n Simple_repeat Simple_repeat 1 25 0 1827 148 31 3 chr10 14204023 14204313 -131384975 - AluSx SINE Alu -14 298 1 288 154 0 0 chr10 14204478 14204530 -131384758 + (TG)n Simple_repeat Simple_repeat 1 52 0 681 212 28 22 chr10 14205661 14205719 -131383569 + L1MA4A LINE L1 6124 6180 -123 1913 100 0 0 chr10 14205719 14205985 -131383303 + AluSc SINE Alu 47 312 0 681 212 28 22 chr10 14205985 14206102 -131383186 + L1MA4A LINE L1 6180 6303 0 442 254 7 58 chr10 14206593 14206731 -131382557 + MIR SINE MIR 4 134 -128 1821 150 11 21 chr10 14206745 14207031 -131382257 + AluJo SINE Alu 9 291 -21 294 87 0 0 chr10 14208915 14208961 -131380327 + (CA)n Simple_repeat Simple_repeat 2 47 0 237 65 0 0 chr10 14209439 14209470 -131379818 + (CA)n Simple_repeat Simple_repeat 2 32 0 392 340 0 33 chr10 14211085 14211151 -131378137 + MIR SINE MIR 8 75 -187 2084 129 0 3 chr10 14211151 14211445 -131377843 - AluSx SINE Alu -19 293 1 392 340 0 33 chr10 14211445 14211528 -131377760 + MIR SINE MIR 75 152 -110 418 219 114 0 chr10 14211907 14212012 -131377276 + MER45 DNA AcHobo 1 117 -61 723 108 45 0 chr10 14212074 14212185 -131377103 - L1PB1 LINE L1 -4 6147 6032 336 188 0 0 chr10 14212194 14212258 -131377030 + MER45 DNA AcHobo 1518 1581 0 2060 151 0 3 chr10 14212912 14213216 -131376072 + AluSx SINE Alu 1 303 -9 325 246 85 17 chr10 14213975 14214093 -131375195 - MIR SINE MIR -135 127 2 2161 132 26 0 chr10 14214421 14214725 -131374563 + AluSx SINE Alu 1 312 0 288 345 34 0 chr10 14214829 14214948 -131374340 + MIR3 SINE MIR 32 154 -54 352 300 108 8 chr10 14215390 14215520 -131373768 - MIR3 SINE MIR -47 161 19 346 291 71 57 chr10 14215897 14216038 -131373250 - L1MC4 LINE L1 -1286 6756 6614 * 364 239 33 33 chr10 14215999 14216091 -131373197 + L1MC4 LINE L1 6612 6703 -1339 343 259 158 67 chr10 14216063 14216250 -131373038 + L1MC4 LINE L1 5768 5937 -796 * 2153 106 0 11 chr10 14216250 14216532 -131372756 - AluSx SINE Alu -21 291 13 343 259 158 67 chr10 14216532 14216641 -131372647 + L1MC4 LINE L1 5937 6703 -30 2325 105 0 3 chr10 14216939 14217245 -131372043 + AluSg SINE Alu 1 305 -5 195 226 333 10 chr10 14217350 14217452 -131371836 + MIR SINE MIR 16 150 -58 683 242 172 14 chr10 14217580 14217795 -131371493 + MIR SINE MIR 1 249 -13 2142 122 3 3 chr10 14217814 14218110 -131371178 + AluSx SINE Alu 10 305 -7 192 333 11 33 chr10 14219227 14219317 -131369971 + MIR SINE MIR 42 129 -133 2202 136 0 13 chr10 14219482 14219792 -131369496 - AluSx SINE Alu -6 306 1 180 0 0 0 chr10 14219795 14219815 -131369473 + (T)n Simple_repeat Simple_repeat 1 20 0 295 264 14 14 chr10 14221087 14221159 -131368129 + L2 LINE L2 3201 3272 0 343 236 45 45 chr10 14221199 14221309 -131367979 - MIR SINE MIR -82 126 17 2272 110 0 0 chr10 14222236 14222527 -131366761 - AluSx SINE Alu -21 291 1 497 288 132 47 chr10 14222641 14222960 -131366328 - L2 LINE L2 -1 3312 2967 721 189 7 13 chr10 14223024 14223191 -131366097 + L1MB8 LINE L1 5772 5932 -250 548 130 0 20 chr10 14223299 14223399 -131365889 + L1MB8 LINE L1 5916 6013 -165 2172 119 3 0 chr10 14223502 14223796 -131365492 + AluSq SINE Alu 1 295 -18 1944 145 0 44 chr10 14224530 14224848 -131364440 - AluJo SINE Alu -8 304 1 259 287 0 44 chr10 14225128 14225309 -131363979 + (CTAG)n Simple_repeat Simple_repeat 1 173 0 285 289 0 39 chr10 14225359 14225539 -131363749 + (CTAG)n Simple_repeat Simple_repeat 4 176 0 1283 167 76 4 chr10 14225657 14225921 -131363367 + L1MB2 LINE L1 5889 6171 0 2403 72 0 0 chr10 14226409 14226701 -131362587 + AluY SINE Alu 1 292 -19 196 204 184 0 chr10 14227469 14227518 -131361770 - MIR3 SINE MIR -44 164 107 269 211 0 0 chr10 14228235 14228287 -131361001 - MIR SINE MIR -116 146 95 1413 137 5 0 chr10 14228382 14228615 -131360673 + AluJo SINE Alu 88 312 0 703 186 29 103 chr10 14228815 14228939 -131360349 - MER5A DNA MER1_type 0 189 57 1197 156 183 16 chr10 14228939 14229196 -131360092 - AluJo SINE Alu -2 300 1 2027 129 7 26 chr10 14229201 14229504 -131359784 - AluSx SINE Alu -15 297 1 703 186 29 103 chr10 14229504 14229577 -131359711 - MER5A DNA MER1_type -136 53 1 747 257 80 59 chr10 14229641 14229980 -131359308 + LTR16A LTR ERVL 105 450 0 651 111 0 0 chr10 14230098 14230188 -131359100 + 5S rRNA rRNA 1 90 -31 400 306 89 0 chr10 14230239 14230363 -131358925 + L2 LINE L2 3138 3272 0 2345 100 7 3 chr10 14230873 14231174 -131358114 - AluSx SINE Alu -10 302 1 24 0 0 0 chr10 14231390 14231414 -131357874 + GC_rich Low_complexity Low_complexity 1 24 0 2129 113 0 45 chr10 14233034 14233343 -131355945 + AluSx SINE Alu 1 295 -17 2444 92 0 0 chr10 14233669 14233972 -131355316 + AluSq SINE Alu 1 303 -10 185 286 107 48 chr10 14235199 14235367 -131353921 + MER5B DNA MER1_type 1 178 0 384 242 76 64 chr10 14235690 14235744 -131353544 + MER69A DNA AcHobo 19 71 -2455 1988 88 53 21 chr10 14235744 14236029 -131353259 - AluSq SINE Alu -19 294 1 384 242 76 64 chr10 14236029 14236131 -131353157 + MER69A DNA AcHobo 71 177 0 318 246 169 31 chr10 14236259 14236454 -131352834 + L2 LINE L2 2263 2484 -830 220 224 0 132 chr10 14237076 14237122 -131352166 + L2 LINE L2 3248 3282 -31 2357 102 3 0 chr10 14237122 14237475 -131351813 - AluSx SINE Alu 0 312 1 220 224 0 132 chr10 14237475 14237504 -131351784 + L2 LINE L2 3282 3313 0 2053 115 7 0 chr10 14238174 14238488 -131350800 + AluSx SINE Alu 1 316 0 2200 133 0 0 chr10 14239392 14239692 -131349596 - AluSx SINE Alu -12 300 1 2296 114 0 0 chr10 14240924 14241223 -131348065 - AluSx SINE Alu -13 299 1 2446 88 3 0 chr10 14242120 14242425 -131346863 + AluSx SINE Alu 1 306 -6 2373 116 0 0 chr10 14243126 14243429 -131345859 - AluSx SINE Alu -9 303 1 2114 143 3 3 chr10 14243470 14243778 -131345510 + AluJo SINE Alu 1 308 -4 2066 125 7 0 chr10 14244160 14244457 -131344831 - AluSx SINE Alu -13 299 1 2027 179 0 0 chr10 14244817 14245118 -131344170 - AluSx SINE Alu -11 301 1 191 254 36 0 chr10 14246596 14246651 -131342637 + MIR SINE MIR 78 134 -74 1431 159 19 0 chr10 14247253 14247511 -131341777 + L1MA4 LINE L1 6032 6294 -6 2028 108 21 14 chr10 14248508 14248796 -131340492 - AluSc SINE Alu -7 302 13 2261 76 31 14 chr10 14249552 14249840 -131339448 + AluSx SINE Alu 1 293 -19 216 0 0 0 chr10 14249857 14249881 -131339407 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 1309 149 0 21 chr10 14250654 14250889 -131338399 - MER46A DNA MER2_type -6 230 1 1408 142 26 13 chr10 14250951 14251184 -131338104 + MER46A DNA MER2_type 1 236 0 205 370 33 47 chr10 14251238 14251449 -131337839 - L3 LINE CR1 -2 1575 1368 1478 181 140 0 chr10 14252001 14252266 -131337022 + AluJb SINE Alu 1 302 0 982 130 0 22 chr10 14252275 14252459 -131336829 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1914 172 0 22 chr10 14254023 14254342 -131334946 + AluJo SINE Alu 1 312 0 433 232 0 0 chr10 14304839 14304921 -131284367 - AluJ/FLAM SINE Alu -229 83 2 1745 173 25 31 chr10 14305707 14306097 -131283191 + MLT1B LTR MaLR 1 590 -3 1741 150 4 0 chr10 14306124 14306397 -131282891 + AluJb SINE Alu 3 276 -36 1448 287 44 68 chr10 14306572 14307275 -131282013 + MER21B LTR ERV1 24 709 -154 368 282 74 37 chr10 14307761 14307924 -131281364 - MIR SINE MIR -74 188 20 624 135 0 0 chr10 14308051 14308147 -131281141 + FRAM SINE Alu 77 172 -4 544 219 57 0 chr10 14308490 14308613 -131280675 - MER5A DNA MER1_type -59 130 1 298 256 48 48 chr10 14308726 14308790 -131280498 + MLT1L LTR MaLR 250 316 -299 2020 123 0 3 chr10 14308790 14309091 -131280197 - AluSx SINE Alu -12 300 1 298 256 48 48 chr10 14309091 14309151 -131280137 + MLT1L LTR MaLR 315 374 -241 323 237 9 0 chr10 14309374 14309488 -131279800 + (TG)n Simple_repeat Simple_repeat 1 115 0 239 274 137 29 chr10 14310831 14310933 -131278355 - MIR SINE MIR -102 160 48 511 241 4 171 chr10 14310951 14311208 -131278080 - MIR SINE MIR -32 230 17 955 226 28 14 chr10 14311227 14311439 -131277849 + MIR SINE MIR 31 245 -17 462 45 152 0 chr10 14311522 14311588 -131277700 + MADE1 DNA Mariner 1 76 -4 357 131 0 0 chr10 14312784 14312845 -131276443 + (TCCC)n Simple_repeat Simple_repeat 1 61 0 287 254 0 0 chr10 14313621 14313688 -131275600 - MER116 DNA Mariner -5 75 9 375 60 0 0 chr10 14313882 14313932 -131275356 + (TG)n Simple_repeat Simple_repeat 2 51 0 2079 98 10 0 chr10 14314775 14315071 -131274217 - AluSq SINE Alu -14 299 1 243 88 0 0 chr10 14315114 14315148 -131274140 + (A)n Simple_repeat Simple_repeat 1 34 0 2130 113 0 3 chr10 14315342 14315652 -131273636 - AluSx SINE Alu -3 309 1 817 180 0 18 chr10 14315751 14315918 -131273370 - AluJb SINE Alu -13 299 136 449 329 19 6 chr10 14315918 14316076 -131273212 + MIR SINE MIR 101 260 -2 1469 158 64 8 chr10 14316158 14316511 -131272777 - AluJb SINE Alu 0 368 1 1641 137 44 0 chr10 14317474 14317745 -131271543 + AluSx SINE Alu 22 304 -8 526 270 63 31 chr10 14317749 14317971 -131271317 - L1MA9 LINE L1 -76 6236 6008 1730 178 0 6 chr10 14318022 14318336 -131270952 - AluJb SINE Alu 0 312 1 192 117 58 39 chr10 14318337 14318440 -131270848 + (TATAA)n Simple_repeat Simple_repeat 5 109 0 1565 205 18 12 chr10 14319180 14319516 -131269772 + MER58B DNA MER1_type 4 341 0 1142 160 0 31 chr10 14319571 14319796 -131269492 + AluJo SINE Alu 95 312 0 277 246 0 0 chr10 14321340 14321397 -131267891 + L2 LINE L2 3256 3312 -1 1003 190 88 19 chr10 14322009 14322248 -131267040 + AluJb SINE Alu 53 306 0 797 164 7 33 chr10 14322630 14322782 -131266506 - MER3 DNA MER1_type -57 152 5 1847 132 14 10 chr10 14322985 14323280 -131266008 - AluSx SINE Alu -16 296 1 895 128 0 13 chr10 14323281 14323430 -131265858 - L1MA10 LINE L1 -7 6327 6181 330 26 0 0 chr10 14323430 14323469 -131265819 + (TG)n Simple_repeat Simple_repeat 1 39 0 1571 139 60 4 chr10 14323481 14323779 -131265509 + AluJb SINE Alu 1 313 0 314 303 86 46 chr10 14324033 14324208 -131265080 - MIR3 SINE MIR -8 200 19 2373 89 0 6 chr10 14324347 14324662 -131264626 - AluSq SINE Alu 0 313 1 2186 108 0 0 chr10 14326038 14326343 -131262945 + AluSc SINE Alu 1 305 -4 1923 153 0 0 chr10 14326484 14326784 -131262504 - AluSx SINE Alu -12 300 1 204 40 0 0 chr10 14327323 14327348 -131261940 + (TG)n Simple_repeat Simple_repeat 1 25 0 244 258 67 79 chr10 14327951 14328110 -131261178 + MIR SINE MIR 54 210 -52 1460 76 0 10 chr10 14328231 14328429 -131260859 - AluY SINE Alu -8 303 108 345 47 0 0 chr10 14328455 14328498 -131260790 + (TG)n Simple_repeat Simple_repeat 2 44 0 2087 189 59 47 chr10 14328515 14328563 -131260725 + MLT2B1 LTR ERVL 6 52 -468 1902 137 0 3 chr10 14328563 14328855 -131260433 - AluSx SINE Alu -21 291 1 2087 189 59 47 chr10 14328855 14329315 -131259973 + MLT2B1 LTR ERVL 52 520 0 1912 139 3 3 chr10 14329679 14329980 -131259308 - AluJo SINE Alu -2 310 10 1491 153 38 24 chr10 14330331 14330618 -131258670 - AluJo SINE Alu -21 291 1 220 254 0 17 chr10 14330792 14330851 -131258437 - L2 LINE L2 -7 3265 3208 1592 135 50 25 chr10 14331043 14331165 -131258123 + AluSx SINE Alu 1 118 -194 259 44 44 0 chr10 14331165 14331210 -131258078 + (CAAAA)n Simple_repeat Simple_repeat 3 49 0 1592 135 50 25 chr10 14331210 14331369 -131257919 + AluSx SINE Alu 118 289 -23 203 33 115 0 chr10 14331369 14331430 -131257858 + (TA)n Simple_repeat Simple_repeat 1 68 0 55 0 0 0 chr10 14331430 14331485 -131257803 + AT_rich Low_complexity Low_complexity 1 55 0 3007 172 97 27 chr10 14331548 14331904 -131257384 + LTR51 LTR ERV1 1 331 -340 3038 94 22 0 chr10 14331904 14332350 -131256938 + L1MA2 LINE L1 5849 6304 0 3007 172 97 27 chr10 14332350 14332620 -131256668 + LTR51 LTR ERV1 331 671 0 3143 239 120 73 chr10 14333789 14335352 -131253936 + HAL1 LINE L1 636 2295 -212 1729 161 0 26 chr10 14335352 14335656 -131253632 - AluJb SINE Alu -16 296 1 3143 239 120 73 chr10 14335656 14335879 -131253409 + HAL1 LINE L1 2295 2506 -1 330 379 9 13 chr10 14336182 14336409 -131252879 - MIR SINE MIR -24 238 13 221 327 62 18 chr10 14336486 14336599 -131252689 + MIR SINE MIR 98 215 -47 2184 74 0 14 chr10 14337037 14337333 -131251955 - AluSg SINE Alu -5 305 14 183 246 45 82 chr10 14337458 14337568 -131251720 - MIR SINE MIR -46 216 111 291 28 0 0 chr10 14337844 14337880 -131251408 + (TG)n Simple_repeat Simple_repeat 2 37 0 857 58 0 0 chr10 14338110 14338214 -131251074 + L1PA7 LINE L1 6048 6151 -3 189 0 0 0 chr10 14338250 14338271 -131251017 + (TTTA)n Simple_repeat Simple_repeat 1 21 0 1983 138 3 0 chr10 14338282 14338579 -131250709 + AluSg SINE Alu 1 298 -12 226 276 40 13 chr10 14339048 14339124 -131250164 + MIR SINE MIR 154 231 -31 2132 114 0 3 chr10 14339289 14339586 -131249702 + AluSx SINE Alu 1 296 -16 4363 143 17 57 chr10 14339767 14340266 -131249022 + L1MB3 LINE L1 5334 5852 -331 1928 139 13 3 chr10 14340266 14340575 -131248713 + AluJb SINE Alu 1 312 0 4363 143 17 57 chr10 14340575 14340614 -131248674 + L1MB3 LINE L1 5852 5891 -292 2157 133 0 0 chr10 14340614 14340923 -131248365 - AluSx SINE Alu -3 309 1 4363 143 17 57 chr10 14340923 14341209 -131248079 + L1MB3 LINE L1 5891 6125 -58 798 137 0 0 chr10 14341209 14341340 -131247948 + L1PB1 LINE L1 6021 6151 0 4363 143 17 57 chr10 14341340 14341384 -131247904 + L1MB3 LINE L1 6125 6169 -14 216 0 0 0 chr10 14341668 14341692 -131247596 + (TTA)n Simple_repeat Simple_repeat 2 25 0 2166 106 0 0 chr10 14341694 14341987 -131247301 - AluSc SINE Alu -16 293 1 21 36 0 0 chr10 14342031 14342059 -131247229 + AT_rich Low_complexity Low_complexity 1 28 0 1426 182 76 3 chr10 14342622 14342913 -131246375 - AluJb SINE Alu 0 312 1 231 220 180 20 chr10 14343477 14343577 -131245711 + MIR SINE MIR 35 150 -58 2125 96 0 7 chr10 14343951 14344254 -131245034 + AluSx SINE Alu 1 301 -11 33 25 0 0 chr10 14344826 14344866 -131244422 + AT_rich Low_complexity Low_complexity 1 40 0 5645 56 0 0 chr10 14344873 14345551 -131243737 - L1PA5 LINE L1 -7 6147 5470 2182 86 0 3 chr10 14345578 14345868 -131243420 + AluSq SINE Alu 12 300 -13 188 215 31 0 chr10 14345915 14345980 -131243308 + GA-rich Low_complexity Low_complexity 3 69 0 1587 184 11 0 chr10 14346700 14346983 -131242305 - AluJb SINE Alu -6 306 21 371 101 0 101 chr10 14347037 14347106 -131242182 + AluSx SINE Alu 1 62 -238 186 43 0 0 chr10 14347112 14347135 -131242153 + (A)n Simple_repeat Simple_repeat 1 23 0 2037 180 122 4 chr10 14347349 14347816 -131241472 + MER74A LTR ERVL 34 555 -3 288 0 0 0 chr10 14348803 14348835 -131240453 + (CA)n Simple_repeat Simple_repeat 1 32 0 329 0 24 0 chr10 14349014 14349055 -131240233 + (TG)n Simple_repeat Simple_repeat 1 42 0 208 327 67 29 chr10 14350347 14350451 -131238837 - L2 LINE L2 -1839 1475 1368 292 265 29 0 chr10 14350861 14350929 -131238359 + L2 LINE L2 3200 3269 -44 1890 143 31 0 chr10 14352413 14352707 -131236581 - AluSx SINE Alu -9 303 1 1523 140 4 0 chr10 14353394 14353637 -131235651 + AluSx SINE Alu 39 282 -30 459 213 15 22 chr10 14353637 14353773 -131235515 + CT-rich Low_complexity Low_complexity 1 135 0 414 250 0 0 chr10 14353783 14353951 -131235337 + C-rich Low_complexity Low_complexity 1 168 0 1938 110 0 0 chr10 14354456 14354729 -131234559 + AluSx SINE Alu 39 311 -1 339 343 48 0 chr10 14354733 14354879 -131234409 - L2 LINE L2 -838 2476 2324 2259 90 3 6 chr10 14357016 14357328 -131231960 - AluSx SINE Alu -1 311 1 387 173 4 2 chr10 14357640 14357728 -131231560 + AluJ/FLAM SINE Alu 2 58 -244 232 216 0 108 chr10 14357728 14357830 -131231458 - L2 LINE L2 -300 2972 2882 2091 105 14 3 chr10 14358437 14358733 -131230555 + AluSx SINE Alu 1 299 -13 2327 54 3 32 chr10 14358735 14359051 -131230237 + AluY SINE Alu 1 307 -4 1442 213 47 0 chr10 14359051 14359351 -131229937 - L1M4 LINE L1 -379 5799 5486 1806 137 7 7 chr10 14359710 14360009 -131229279 + AluSx SINE Alu 1 299 -13 189 0 0 0 chr10 14360646 14360667 -131228621 + (T)n Simple_repeat Simple_repeat 1 21 0 1973 252 50 23 chr10 14360998 14361521 -131227767 - MLT1H LTR MaLR 0 549 13 428 311 64 14 chr10 14362105 14362327 -131226961 + L1ME2 LINE L1 5478 5717 -445 523 254 81 133 chr10 14362329 14362598 -131226690 - L2 LINE L2 0 3313 3070 667 200 56 22 chr10 14362598 14362778 -131226510 + MER53 DNA DNA 1 186 -3 523 254 81 133 chr10 14362778 14362914 -131226374 - L2 LINE L2 -243 3070 2929 329 278 102 16 chr10 14362948 14363135 -131226153 + L1ME2 LINE L1 5746 5948 -216 2349 72 3 0 chr10 14363365 14363671 -131225617 - AluSq SINE Alu -6 307 1 380 329 63 0 chr10 14364100 14364258 -131225030 + MIR SINE MIR 68 235 -27 192 77 0 0 chr10 14364260 14364286 -131225002 + (TTA)n Simple_repeat Simple_repeat 1 26 0 378 266 186 49 chr10 14365007 14365233 -131224055 - MIR SINE MIR 0 262 6 396 287 78 65 chr10 14365756 14365956 -131223332 + MIR SINE MIR 26 231 -31 201 74 0 0 chr10 14365956 14365983 -131223305 + (TTA)n Simple_repeat Simple_repeat 3 29 0 396 287 78 65 chr10 14365983 14366012 -131223276 + MIR SINE MIR 231 258 -4 2067 103 3 3 chr10 14366534 14366825 -131222463 - AluSx SINE Alu -2 310 20 232 332 67 14 chr10 14367138 14367361 -131221927 - L2 LINE L2 -213 3059 2825 785 172 12 37 chr10 14367661 14367824 -131221464 - AluJo/FRAM SINE Alu -19 293 135 1492 148 109 28 chr10 14367824 14368108 -131221180 - AluJo SINE Alu -5 307 1 921 250 73 82 chr10 14368108 14368532 -131220756 - L2 LINE L2 -10 3303 2884 393 251 27 153 chr10 14368553 14368687 -131220601 + MER5A DNA MER1_type 14 121 -68 2105 119 3 3 chr10 14368687 14368997 -131220291 - AluSx SINE Alu -2 310 1 393 251 27 153 chr10 14368997 14369045 -131220243 + MER5A DNA MER1_type 121 173 -16 330 45 0 0 chr10 14369054 14369098 -131220190 + (TC)n Simple_repeat Simple_repeat 1 44 0 1742 150 27 23 chr10 14369244 14369544 -131219744 + AluJo SINE Alu 6 306 -6 2049 104 7 26 chr10 14369926 14370234 -131219054 - AluSx SINE Alu -10 302 1 22 0 0 0 chr10 14370293 14370315 -131218973 + AT_rich Low_complexity Low_complexity 1 22 0 803 251 38 30 chr10 14370388 14370623 -131218665 + MIR SINE MIR 16 252 -10 2134 96 0 0 chr10 14370630 14370940 -131218348 - AluSx SINE Alu 0 310 1 853 168 6 30 chr10 14371875 14372042 -131217246 - FRAM SINE Alu -13 163 1 394 306 75 15 chr10 14372044 14372178 -131217110 + MIR SINE MIR 102 243 -19 302 273 91 27 chr10 14372182 14372292 -131216996 + MIR SINE MIR 143 259 -3 1522 145 87 11 chr10 14372378 14372654 -131216634 - AluJo SINE Alu -15 297 1 2034 121 24 0 chr10 14373167 14373464 -131215824 - AluSx SINE Alu -8 304 1 2038 108 3 3 chr10 14373599 14373895 -131215393 - AluSx SINE Alu -11 301 6 229 143 0 0 chr10 14374472 14374507 -131214781 - MER85 DNA T2_type 0 139 105 299 71 0 0 chr10 14374591 14374633 -131214655 - MER85 DNA T2_type -96 43 2 7122 60 23 0 chr10 14374856 14375936 -131213352 - L1PA8 LINE L1 0 6172 5092 2671 100 8 8 chr10 14376083 14376462 -131212826 + L1PA13 LINE L1 5765 6143 -20 1217 164 14 24 chr10 14376504 14376717 -131212571 - MIR SINE MIR -35 227 17 288 297 57 62 chr10 14376734 14376943 -131212345 - L2 LINE L2 -170 3143 2936 208 261 0 0 chr10 14376982 14377028 -131212260 - L2 LINE L2 -557 2757 2712 280 301 86 73 chr10 14377107 14377641 -131211647 - L2 LINE L2 -431 2883 2343 1959 104 42 0 chr10 14377750 14378037 -131211251 + AluSx SINE Alu 1 299 -13 217 246 0 49 chr10 14378135 14378196 -131211092 + L3b LINE CR1 1306 1363 -220 1305 154 0 0 chr10 14378305 14378506 -131210782 + AluJb SINE Alu 82 282 -30 180 0 0 0 chr10 14378509 14378529 -131210759 + (CAAA)n Simple_repeat Simple_repeat 3 22 0 181 79 0 53 chr10 14379562 14379600 -131209688 + (CGG)n Simple_repeat Simple_repeat 2 37 0 28 68 0 0 chr10 14379661 14379705 -131209583 + GC_rich Low_complexity Low_complexity 1 44 0 194 62 31 0 chr10 14379771 14379803 -131209485 + (CGGGGG)n Simple_repeat Simple_repeat 5 37 0 1923 92 61 10 chr10 14383862 14384155 -131205133 - AluSc SINE Alu -1 308 1 976 191 0 6 chr10 14384800 14384983 -131204305 + FRAM SINE Alu 1 174 -2 201 74 0 0 chr10 14385624 14385651 -131203637 + (GA)n Simple_repeat Simple_repeat 2 28 0 346 226 48 55 chr10 14386120 14386254 -131203034 + MIR SINE MIR 1 139 -69 782 145 0 0 chr10 14386325 14386442 -131202846 - FLAM_C SINE Alu -18 125 9 891 80 0 0 chr10 14387311 14387449 -131201839 + (TG)n Simple_repeat Simple_repeat 2 139 0 2095 121 0 7 chr10 14388038 14388344 -131200944 - AluSx SINE Alu -7 305 2 2045 125 7 0 chr10 14388449 14388754 -131200534 + AluJb SINE Alu 1 307 -5 441 0 0 0 chr10 14389512 14389561 -131199727 + (CA)n Simple_repeat Simple_repeat 1 49 0 180 77 0 0 chr10 14390105 14390131 -131199157 + (TC)n Simple_repeat Simple_repeat 2 27 0 1608 155 4 22 chr10 14390138 14390416 -131198872 - AluJo SINE Alu -39 273 1 857 288 168 37 chr10 14390524 14391514 -131197774 - L2 LINE L2 0 3313 2193 736 180 8 0 chr10 14391607 14391735 -131197553 + FLAM_C SINE Alu 2 130 -3 624 148 13 26 chr10 14391735 14391890 -131197398 + GA-rich Low_complexity Low_complexity 1 153 0 1061 171 0 75 chr10 14392012 14392264 -131197024 - AluJo SINE Alu -6 306 74 806 109 0 8 chr10 14392284 14392403 -131196885 - AluJo SINE Alu -162 150 33 455 250 0 0 chr10 14392413 14392529 -131196759 - L1MA10 LINE L1 -4 6330 6215 372 164 0 0 chr10 14392697 14392764 -131196524 + CT-rich Low_complexity Low_complexity 2 68 0 2195 106 0 0 chr10 14392778 14393081 -131196207 - AluSx SINE Alu -9 303 1 189 0 0 0 chr10 14393308 14393329 -131195959 + (T)n Simple_repeat Simple_repeat 1 21 0 37 62 0 0 chr10 14394697 14394762 -131194526 + AT_rich Low_complexity Low_complexity 1 65 0 518 301 137 5 chr10 14395378 14395597 -131193691 - L3 LINE CR1 -25 1552 1305 441 243 28 0 chr10 14395664 14395771 -131193517 - MER94 DNA DNA -24 110 1 462 328 11 17 chr10 14395832 14396006 -131193282 - L3 LINE CR1 -407 1170 998 259 247 14 14 chr10 14396068 14396141 -131193147 - L3 LINE CR1 -852 725 653 307 267 43 9 chr10 14396758 14396874 -131192414 - L1ME LINE L1 -411 5710 5591 2136 115 3 0 chr10 14397283 14397587 -131191701 - AluSx SINE Alu -7 305 1 1544 167 21 0 chr10 14397711 14397992 -131191296 + AluSq SINE Alu 6 292 -21 1610 152 45 0 chr10 14398340 14398640 -131190648 - AluSq SINE Alu 0 314 3 186 143 0 0 chr10 14398750 14398785 -131190503 + (CAAA)n Simple_repeat Simple_repeat 1 35 0 514 270 23 46 chr10 14399477 14399651 -131189637 - MIR SINE MIR -79 183 14 180 0 0 0 chr10 14400846 14400866 -131188422 + (GGGGA)n Simple_repeat Simple_repeat 3 22 0 187 268 18 104 chr10 14401054 14401218 -131188070 - L2 LINE L2 -328 2985 2836 192 143 0 125 chr10 14402373 14402429 -131186859 - MER5A DNA MER1_type -35 154 106 1652 155 30 17 chr10 14402729 14403025 -131186263 - AluJb SINE Alu -12 300 1 49 18 0 0 chr10 14403285 14403341 -131185947 + AT_rich Low_complexity Low_complexity 1 56 0 851 145 0 0 chr10 14403448 14403572 -131185716 - FLAM_A SINE Alu -8 125 2 528 80 90 17 chr10 14403591 14403884 -131185404 + (TTATA)n Simple_repeat Simple_repeat 1 314 0 197 90 64 39 chr10 14403906 14403984 -131185304 + (TTATA)n Simple_repeat Simple_repeat 5 84 0 1730 178 0 6 chr10 14403985 14404299 -131184989 + AluJb SINE Alu 1 312 0 615 235 63 26 chr10 14404364 14404572 -131184716 + L1MA9 LINE L1 6024 6236 -63 1805 114 44 0 chr10 14404576 14404847 -131184441 - AluSx SINE Alu -8 304 22 1470 158 64 8 chr10 14405810 14406076 -131183212 + AluJb SINE Alu 1 368 0 596 46 23 0 chr10 14406076 14406163 -131183125 + (TAAAA)n Simple_repeat Simple_repeat 5 180 0 449 329 19 6 chr10 14406245 14406403 -131182885 - MIR SINE MIR -2 260 101 817 180 0 18 chr10 14406403 14406570 -131182718 + AluJb SINE Alu 136 299 -13 2130 113 0 3 chr10 14406669 14406979 -131182309 + AluSx SINE Alu 1 309 -3 243 88 0 0 chr10 14407173 14407207 -131182081 + (T)n Simple_repeat Simple_repeat 1 34 0 2105 114 3 0 chr10 14407250 14407557 -131181731 + AluSq SINE Alu 1 308 -5 1931 134 0 26 chr10 14407933 14408246 -131181042 - AluSx SINE Alu -7 305 1 195 146 0 0 chr10 14408581 14408622 -131180666 + (A)n Simple_repeat Simple_repeat 1 41 0 407 140 0 0 chr10 14410311 14410368 -131178920 - MLT1B LTR MaLR -332 58 2 836 165 0 0 chr10 14410624 14410757 -131178531 + AluSg/x SINE Alu 158 290 -22 924 238 40 8 chr10 14411089 14411337 -131177951 - MER63 DNA MER1_type -1 1060 805 444 101 72 0 chr10 14411488 14411557 -131177731 - MER63 DNA MER1_type -362 700 1 226 353 25 34 chr10 14411563 14411682 -131177606 - MIR SINE MIR -59 149 32 712 221 36 72 chr10 14411980 14412147 -131177141 + L2 LINE L2 3126 3287 -26 2300 66 3 23 chr10 14412147 14412449 -131176839 - AluSp SINE Alu -17 296 1 712 221 36 72 chr10 14412449 14412476 -131176812 + L2 LINE L2 3287 3313 0 378 298 140 11 chr10 14412888 14413066 -131176222 - L3b LINE CR1 -87 1496 1296 2058 109 0 3 chr10 14413078 14413393 -131175895 - AluSp SINE Alu 0 314 1 263 294 74 74 chr10 14414020 14414441 -131174847 - L1ME4a LINE L1 -59 6062 5642 475 310 77 56 chr10 14414877 14415200 -131174088 + L2 LINE L2 2943 3272 0 396 0 0 0 chr10 14415283 14415327 -131173961 + (CA)n Simple_repeat Simple_repeat 2 45 0 222 274 10 20 chr10 14415336 14415438 -131173850 + (CATATA)n Simple_repeat Simple_repeat 4 104 0 435 19 0 0 chr10 14415479 14415531 -131173757 + (TAGA)n Simple_repeat Simple_repeat 4 55 0 183 100 0 0 chr10 14415552 14415582 -131173706 + (TA)n Simple_repeat Simple_repeat 2 31 0 2006 105 0 57 chr10 14416813 14417128 -131172160 + AluSx SINE Alu 1 297 -15 434 304 89 37 chr10 14417323 14417514 -131171774 + L3b LINE CR1 1310 1510 -73 1975 125 13 7 chr10 14417691 14417995 -131171293 - AluSx SINE Alu -6 306 1 1268 181 38 48 chr10 14418000 14418293 -131170995 - AluJo SINE Alu -22 290 1 672 133 68 236 chr10 14418713 14419024 -131170264 + MER33 DNA MER1_type 14 255 -2330 1909 107 70 0 chr10 14419024 14419295 -131169993 + AluSc SINE Alu 3 292 -17 672 133 68 236 chr10 14419295 14419352 -131169936 + MER33 DNA MER1_type 255 320 -4 3191 138 47 21 chr10 14419363 14419625 -131169663 - MER1A DNA MER1_type -2173 527 273 2224 110 0 0 chr10 14419625 14419925 -131169363 - AluSc SINE Alu -9 300 1 3191 138 47 21 chr10 14419925 14420176 -131169112 - MER1A DNA MER1_type -2427 273 1 2071 126 3 0 chr10 14420302 14420612 -131168676 - AluSx SINE Alu -1 311 1 443 313 159 11 chr10 14420629 14420805 -131168483 - MIR SINE MIR -56 206 5 716 120 0 68 chr10 14421322 14421439 -131167849 - AluSg/x SINE Alu -16 296 188 1471 119 5 0 chr10 14421439 14421657 -131167631 - AluSq SINE Alu -94 219 1 204 40 0 0 chr10 14422196 14422221 -131167067 + (TG)n Simple_repeat Simple_repeat 1 25 0 219 250 78 63 chr10 14422825 14422961 -131166327 + MIR SINE MIR 54 191 -62 21 0 0 0 chr10 14423071 14423092 -131166196 + AT_rich Low_complexity Low_complexity 1 21 0 339 343 48 0 chr10 14423094 14423240 -131166048 - L2 LINE L2 -838 2476 2324 2259 90 3 6 chr10 14425376 14425688 -131163600 - AluSx SINE Alu -1 311 1 387 173 4 2 chr10 14426000 14426088 -131163200 + AluJ/FLAM SINE Alu 2 58 -244 232 216 0 108 chr10 14426088 14426190 -131163098 - L2 LINE L2 -300 2972 2882 2091 105 14 3 chr10 14426797 14427093 -131162195 + AluSx SINE Alu 1 299 -13 2128 85 0 29 chr10 14427095 14427402 -131161886 + AluY SINE Alu 1 298 -13 186 294 0 20 chr10 14427475 14427526 -131161762 + MIR SINE MIR 23 72 -136 310 305 30 41 chr10 14427551 14427748 -131161540 + L2 LINE L2 2910 3104 -168 1817 145 3 3 chr10 14427829 14428125 -131161163 - AluSx SINE Alu -15 297 2 245 321 71 57 chr10 14428325 14428465 -131160823 + L2 LINE L2 2923 3064 -208 2221 97 0 13 chr10 14428566 14428876 -131160412 + AluSg SINE Alu 1 306 -4 228 243 0 54 chr10 14428920 14428994 -131160294 + L2 LINE L2 3244 3313 0 2016 118 0 0 chr10 14429635 14429915 -131159373 + AluSc SINE Alu 1 280 -29 1617 153 0 71 chr10 14431134 14431442 -131157846 - AluJo SINE Alu -26 286 1 1808 120 0 8 chr10 14431567 14431834 -131157454 + AluSx SINE Alu 34 298 -14 1593 180 3 38 chr10 14431990 14432307 -131156981 - AluJo SINE Alu -6 306 1 2060 108 0 49 chr10 14433202 14433527 -131155761 - AluSc SINE Alu 0 309 1 881 180 12 18 chr10 14433809 14433976 -131155312 - FRAM SINE Alu 0 166 1 1568 151 10 49 chr10 14434366 14434525 -131154763 - AluJo SINE Alu -20 292 149 1815 148 7 0 chr10 14434525 14434815 -131154473 - AluSx SINE Alu -9 303 12 1568 151 10 49 chr10 14434815 14434959 -131154329 - AluJo SINE Alu -163 149 1 653 219 123 0 chr10 14435302 14435457 -131153831 + MER5B DNA MER1_type 1 174 -4 2155 102 0 0 chr10 14435481 14435776 -131153512 - AluY SINE Alu -16 295 1 877 184 66 5 chr10 14435958 14436170 -131153118 + L1MD3 LINE L1 7756 7980 -15 2112 130 0 0 chr10 14436467 14436768 -131152520 - AluSx SINE Alu -11 301 1 279 79 0 0 chr10 14437640 14437678 -131151610 + (CACG)n Simple_repeat Simple_repeat 2 39 0 278 253 379 0 chr10 14438431 14438526 -131150762 - MER94 DNA DNA -1 133 3 1769 132 30 20 chr10 14439806 14440102 -131149186 - AluSx SINE Alu -13 299 1 1022 94 0 0 chr10 14440118 14440256 -131149032 + AluSg/x SINE Alu 160 297 -15 360 185 12 12 chr10 14440555 14440636 -131148652 - AluSg/x SINE Alu -3 299 219 372 175 0 0 chr10 14440819 14440882 -131148406 + Alu SINE Alu 235 297 -3 2224 88 7 0 chr10 14441178 14441472 -131147816 - AluSc SINE Alu -13 296 1 1072 232 120 4 chr10 14441505 14441755 -131147533 + MLT1A2 LTR MaLR 1 279 -95 260 300 31 46 chr10 14441763 14441893 -131147395 - L2 LINE L2 -5 3308 3181 686 228 65 122 chr10 14442411 14442456 -131146832 - MARNA DNA Mariner -17 569 523 1991 110 21 0 chr10 14442456 14442746 -131146542 + AluSx SINE Alu 1 296 -16 686 228 65 122 chr10 14442746 14442760 -131146528 - MARNA DNA Mariner -63 523 510 1924 148 61 111 chr10 14442760 14443200 -131146088 - MER47B DNA MER2_type 0 418 1 686 228 65 122 chr10 14443200 14443508 -131145780 - MARNA DNA Mariner -76 510 222 1766 142 56 23 chr10 14443602 14443904 -131145384 + AluJo SINE Alu 1 312 0 350 173 0 12 chr10 14443911 14443992 -131145296 + GA-rich Low_complexity Low_complexity 1 80 0 184 278 278 9 chr10 14444370 14444485 -131144803 - MIR SINE MIR -60 202 57 1817 186 62 5 chr10 14444485 14444873 -131144415 + L1MB4 LINE L1 5771 6180 0 633 209 171 37 chr10 14445602 14445789 -131143499 + MLT1I LTR MaLR 198 409 0 2415 101 55 0 chr10 14446765 14447110 -131142178 + THE1B LTR MaLR 1 364 0 364 231 77 0 chr10 14447335 14447413 -131141875 + MIR3 SINE MIR 74 157 -51 1346 182 17 34 chr10 14447467 14447763 -131141525 - AluJo SINE Alu -21 291 1 676 222 7 46 chr10 14447919 14448072 -131141216 + MIR SINE MIR 82 228 -34 2092 99 0 7 chr10 14448137 14448449 -131140839 + AluSx SINE Alu 1 310 0 185 292 42 42 chr10 14448653 14448749 -131140539 + L2 LINE L2 2995 3090 -223 499 214 156 74 chr10 14448846 14448993 -131140295 + MLT1D LTR MaLR 1 135 -332 1612 125 0 74 chr10 14448993 14449290 -131139998 - AluSx SINE Alu -10 302 28 499 214 156 74 chr10 14449290 14449543 -131139745 + MLT1D LTR MaLR 135 467 0 346 273 55 38 chr10 14450881 14451042 -131138246 - MIR SINE MIR -55 207 47 286 238 0 24 chr10 14451326 14451410 -131137878 - L1MC4 LINE L1 -1325 6717 6636 * 936 196 29 0 chr10 14451397 14451601 -131137687 - L1MA8 LINE L1 -27 6264 6055 236 375 48 10 chr10 14451704 14451808 -131137480 + L2 LINE L2 3150 3257 -15 603 214 101 59 chr10 14453406 14453489 -131135799 - MER2 DNA MER2_type 0 345 267 1814 134 9 53 chr10 14453489 14453809 -131135479 + AluSg SINE Alu 1 306 -4 603 214 101 59 chr10 14453809 14453904 -131135384 - MER2 DNA MER2_type -78 267 152 2146 111 0 7 chr10 14453904 14454210 -131135078 + AluSx SINE Alu 1 304 -8 603 214 101 59 chr10 14454210 14454268 -131135020 - MER2 DNA MER2_type -193 152 98 2910 174 26 26 chr10 14454293 14454622 -131134666 - MER44D DNA MER2_type -1892 595 209 1920 117 101 38 chr10 14454622 14454938 -131134350 + MER1B DNA MER1_type 2 337 0 2910 174 26 26 chr10 14454938 14455148 -131134140 - MER44D DNA MER2_type -2277 210 1 421 238 0 0 chr10 14455149 14455233 -131134055 - MER2 DNA MER2_type -261 84 1 230 340 124 0 chr10 14455366 14455463 -131133825 + MIR SINE MIR 148 256 -6 3782 130 51 19 chr10 14457460 14457813 -131131475 - L1PB4 LINE L1 0 6156 5773 2277 97 3 0 chr10 14457813 14458124 -131131164 - AluSp SINE Alu -1 312 1 3782 130 51 19 chr10 14458124 14458401 -131130887 - L1PB4 LINE L1 -383 5773 5506 1545 141 130 11 chr10 14458535 14458804 -131130484 + AluJo SINE Alu 1 301 -1 2037 130 0 0 chr10 14460082 14460382 -131128906 - AluSx SINE Alu -12 300 1 854 211 0 6 chr10 14460590 14460761 -131128527 + FRAM SINE Alu 1 166 -10 247 380 70 22 chr10 14460773 14461002 -131128286 + MIR SINE MIR 17 256 -6 407 237 44 0 chr10 14461720 14461834 -131127454 - MER5B DNA MER1_type -1 177 59 614 191 0 0 chr10 14461840 14461945 -131127343 - AluJo SINE Alu -6 306 202 1109 145 0 0 chr10 14462032 14462198 -131127090 - AluJo SINE Alu -112 200 35 197 270 96 70 chr10 14462342 14462430 -131126858 - L2 LINE L2 -8 3264 3171 2265 103 58 11 chr10 14462430 14462778 -131126510 - THE1B LTR MaLR 0 364 1 197 270 96 70 chr10 14462778 14462804 -131126484 - L2 LINE L2 -101 3171 3147 402 262 206 7 chr10 14462871 14463012 -131126276 + MIR SINE MIR 69 237 -25 351 273 263 25 chr10 14462989 14463187 -131126101 - MIR SINE MIR 0 262 18 * 2014 133 0 19 chr10 14463268 14463584 -131125704 + AluSx SINE Alu 1 310 -2 200 59 29 0 chr10 14463601 14463635 -131125653 + (CAAAA)n Simple_repeat Simple_repeat 4 38 0 550 276 74 41 chr10 14464415 14464658 -131124630 + MIR SINE MIR 8 258 -4 3204 116 49 18 chr10 14464700 14465209 -131124079 + MER1A DNA MER1_type 3 527 0 266 196 0 0 chr10 14465222 14465273 -131124015 - L2 LINE L2 0 3313 3263 2069 116 0 0 chr10 14465298 14465590 -131123698 - AluSx SINE Alu -20 292 1 204 253 88 66 chr10 14465777 14465868 -131123420 - MIR SINE MIR -77 131 39 2480 56 0 0 chr10 14466045 14466349 -131122939 - AluY SINE Alu -7 304 1 1494 165 10 28 chr10 14467395 14467686 -131121602 - AluJo SINE Alu -26 286 1 2126 107 0 0 chr10 14467793 14468082 -131121206 - AluSx SINE Alu -20 292 4 1678 172 3 31 chr10 14468279 14468598 -131120690 - AluJo SINE Alu -2 310 1 1764 174 25 29 chr10 14469383 14469773 -131119515 + MLT1B LTR MaLR 1 591 -2 2142 110 3 0 chr10 14469811 14470110 -131119178 + AluSq SINE Alu 13 312 -1 1741 150 4 0 chr10 14470121 14470394 -131118894 + AluJb SINE Alu 3 276 -36 1482 284 44 70 chr10 14470569 14471273 -131118015 + MER21B LTR ERV1 24 709 -154 374 284 74 31 chr10 14471761 14471923 -131117365 - MIR SINE MIR -74 188 20 624 135 0 0 chr10 14472050 14472146 -131117142 + FRAM SINE Alu 77 172 -4 544 219 57 0 chr10 14472489 14472612 -131116676 - MER5A DNA MER1_type -59 130 1 298 256 48 48 chr10 14472725 14472789 -131116499 + MLT1L LTR MaLR 250 316 -299 2020 123 0 3 chr10 14472789 14473090 -131116198 - AluSx SINE Alu -12 300 1 298 256 48 48 chr10 14473090 14473150 -131116138 + MLT1L LTR MaLR 315 374 -241 323 237 9 0 chr10 14473373 14473487 -131115801 + (TG)n Simple_repeat Simple_repeat 1 115 0 239 274 137 29 chr10 14474830 14474932 -131114356 - MIR SINE MIR -102 160 48 511 241 4 171 chr10 14474950 14475207 -131114081 - MIR SINE MIR -32 230 17 955 226 28 14 chr10 14475226 14475438 -131113850 + MIR SINE MIR 31 245 -17 462 45 152 0 chr10 14475521 14475587 -131113701 + MADE1 DNA Mariner 1 76 -4 357 131 0 0 chr10 14476783 14476844 -131112444 + (TCCC)n Simple_repeat Simple_repeat 1 61 0 287 254 0 0 chr10 14477620 14477687 -131111601 - MER116 DNA Mariner -5 75 9 375 60 0 0 chr10 14477881 14477931 -131111357 + (TG)n Simple_repeat Simple_repeat 2 51 0 2169 84 10 0 chr10 14478774 14479070 -131110218 - AluSp SINE Alu -14 299 1 1591 92 5 0 chr10 14479179 14479397 -131109891 + AluSq SINE Alu 1 219 -94 716 120 0 68 chr10 14479397 14479514 -131109774 + AluSg/x SINE Alu 186 294 -16 443 313 159 11 chr10 14480031 14480207 -131109081 + MIR SINE MIR 5 206 -56 2071 126 3 0 chr10 14480224 14480534 -131108754 + AluSx SINE Alu 1 311 -1 3191 138 47 21 chr10 14480659 14480910 -131108378 + MER1A DNA MER1_type 1 244 -2456 2224 110 0 0 chr10 14480910 14481210 -131108078 + AluSc SINE Alu 1 300 -9 3191 138 47 21 chr10 14481210 14481472 -131107816 + MER1A DNA MER1_type 244 527 0 546 173 84 128 chr10 14481483 14481540 -131107748 - Charlie5 DNA MER1_type -4 2581 2523 1909 107 70 0 chr10 14481540 14481811 -131107477 - AluSc SINE Alu -17 292 3 546 173 84 128 chr10 14481811 14482002 -131107286 - Charlie5 DNA MER1_type -62 2523 2344 239 372 0 23 chr10 14482137 14482266 -131107022 + CT-rich Low_complexity Low_complexity 2 127 0 876 158 0 0 chr10 14482375 14482508 -131106780 - AluSq/x SINE Alu -180 133 1 185 315 0 81 chr10 14482598 14482709 -131106579 - L2 LINE L2 -185 3087 2986 342 315 74 19 chr10 14482863 14483025 -131106263 + MIR3 SINE MIR 30 200 -8 1385 187 0 8 chr10 14483065 14483322 -131105966 + AluJo SINE Alu 37 291 -21 815 247 58 25 chr10 14484175 14484418 -131104870 - MIR SINE MIR -10 252 2 1512 186 0 4 chr10 14485873 14486147 -131103141 + AluJo SINE Alu 32 304 -8 2089 106 13 10 chr10 14486891 14487192 -131102096 - AluSx SINE Alu -10 302 1 23 33 0 0 chr10 14488249 14488279 -131101009 + AT_rich Low_complexity Low_complexity 1 30 0 2246 100 0 0 chr10 14488280 14488591 -131100697 + AluY SINE Alu 1 311 0 2113 73 0 4 chr10 14489077 14489352 -131099936 - AluSg SINE Alu -8 302 29 857 292 132 36 chr10 14489353 14489961 -131099327 - L2 LINE L2 -2 3311 2654 332 311 20 66 chr10 14490412 14490563 -131098725 + L3 LINE CR1 843 986 -591 231 296 67 21 chr10 14491668 14491786 -131097502 + MIR3 SINE MIR 86 160 -48 1792 182 24 25 chr10 14491906 14492277 -131097011 - MLT1A2 LTR MaLR -3 546 1 308 257 108 0 chr10 14492336 14492410 -131096878 + MIR SINE MIR 1 82 -180 1010 125 6 25 chr10 14492433 14492593 -131096695 + MLT1A1 LTR MaLR 1 157 -208 1657 180 14 0 chr10 14492594 14492888 -131096400 + AluJb SINE Alu 3 300 -12 390 129 0 0 chr10 14492888 14492950 -131096338 + (GA)n Simple_repeat Simple_repeat 1 62 0 979 174 61 33 chr10 14492955 14493168 -131096120 + MLT1A1 LTR MaLR 156 374 0 286 295 0 0 chr10 14493187 14493265 -131096023 + MIR SINE MIR 180 257 -5 1870 134 3 0 chr10 14494176 14494497 -131094791 - AluSx SINE Alu 0 322 1 254 217 12 12 chr10 14494561 14494644 -131094644 + (TTTAA)n Simple_repeat Simple_repeat 3 85 0 2199 99 3 0 chr10 14495325 14495619 -131093669 + AluSx SINE Alu 1 295 -17 228 67 0 0 chr10 14495701 14495731 -131093557 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 648 246 119 25 chr10 14495857 14496093 -131093195 - L2 LINE L2 0 3313 3056 247 346 54 15 chr10 14496236 14496366 -131092922 - MIR3 SINE MIR -38 170 36 2008 128 0 23 chr10 14496563 14496868 -131092420 + AluSx SINE Alu 1 298 -14 463 264 161 1 chr10 14497489 14497675 -131091613 + MIR SINE MIR 37 250 -12 511 323 62 60 chr10 14498250 14498466 -131090822 - L3 LINE CR1 -12 1565 1351 2441 51 7 0 chr10 14498466 14498762 -131090526 - AluY SINE Alu -13 298 1 511 323 62 60 chr10 14498762 14499043 -131090245 - L3 LINE CR1 -226 1351 1067 1099 164 14 5 chr10 14499128 14499336 -131089952 - AluJo SINE Alu -19 293 84 246 269 295 29 chr10 14499351 14499663 -131089625 - L3 LINE CR1 -590 987 593 331 318 210 0 chr10 14499823 14499999 -131089289 - L3 LINE CR1 -998 579 367 394 235 25 105 chr10 14500231 14500393 -131088895 + L2 LINE L2 3107 3255 -58 269 174 0 0 chr10 14500495 14500541 -131088747 + L2 LINE L2 3226 3271 -1 1712 187 30 16 chr10 14500699 14501063 -131088225 - L1MB8 LINE L1 -13 6165 5797 825 166 7 0 chr10 14501063 14501208 -131088080 - AluSp/q SINE Alu -14 299 154 698 208 86 63 chr10 14501958 14502159 -131087129 + MIR SINE MIR 6 202 -60 10694 92 26 4 chr10 14502664 14504108 -131085180 + Charlie3 DNA MER1_type 543 2017 -693 367 124 38 29 chr10 14504226 14504331 -131084957 + GA-rich Low_complexity Low_complexity 1 106 0 603 116 0 0 chr10 14504852 14504947 -131084341 - L1MA4A LINE L1 -4 6299 6205 2183 105 3 0 chr10 14505279 14505584 -131083704 - AluSp SINE Alu -5 308 3 2027 123 0 16 chr10 14507199 14507509 -131081779 - AluSx SINE Alu -7 305 1 304 249 185 44 chr10 14507677 14507882 -131081406 + LTR33A LTR ERVL 112 345 -178 274 319 75 25 chr10 14509135 14509295 -131079993 - MIR SINE MIR -36 226 59 2430 78 0 0 chr10 14510104 14510398 -131078890 + AluY SINE Alu 1 294 -17 280 252 7 147 chr10 14511081 14511224 -131078064 + MIR SINE MIR 66 188 -74 312 275 79 106 chr10 14512292 14512547 -131076741 - MIR SINE MIR -15 247 2 283 291 181 14 chr10 14512820 14513030 -131076258 - MIR SINE MIR -12 250 6 250 236 14 42 chr10 14514378 14514450 -131074838 - MIR3 SINE MIR -30 178 109 248 290 20 30 chr10 14515499 14515599 -131073689 - MIR SINE MIR -138 124 26 2211 93 3 7 chr10 14515712 14516001 -131073287 + AluSc SINE Alu 1 288 -21 293 278 14 0 chr10 14516615 14516687 -131072601 + L2 LINE L2 3191 3263 -9 206 301 16 73 chr10 14516716 14516839 -131072449 - MIR SINE MIR -135 127 12 211 331 33 16 chr10 14517063 14517184 -131072104 - MIR SINE MIR -136 126 4 2301 97 0 10 chr10 14517893 14518192 -131071096 - AluSx SINE Alu -16 296 1 2457 227 5 34 chr10 14518219 14518779 -131070509 + MER74A LTR ERVL 1 544 -14 222 302 108 14 chr10 14518982 14519121 -131070167 + MIR SINE MIR 56 207 -55 256 295 155 0 chr10 14520574 14520703 -131068585 + MIR3 SINE MIR 58 206 -2 337 306 0 19 chr10 14520737 14520845 -131068443 + MER81 DNA DNA 8 113 -1 27 73 0 0 chr10 14520894 14520949 -131068339 + AT_rich Low_complexity Low_complexity 1 55 0 310 203 61 0 chr10 14520968 14521131 -131068157 + (TA)n Simple_repeat Simple_repeat 1 173 0 180 297 47 0 chr10 14521172 14521236 -131068052 + MIR SINE MIR 196 262 0 1436 216 11 0 chr10 14521924 14522206 -131067082 + AluJb SINE Alu 18 302 -10 1822 132 0 78 chr10 14522220 14522554 -131066734 + AluSx SINE Alu 1 308 -4 264 158 0 0 chr10 14523361 14523418 -131065870 + A-rich Low_complexity Low_complexity 1 57 0 787 169 23 0 chr10 14524586 14524716 -131064572 - FLAM_A SINE Alu 0 133 1 2227 90 0 4 chr10 14525166 14525476 -131063812 - AluSc SINE Alu 0 309 1 312 298 58 0 chr10 14526244 14526348 -131062940 + L2 LINE L2 3155 3264 -8 189 296 0 0 chr10 14528600 14528698 -131060590 + (TG)n Simple_repeat Simple_repeat 2 99 0 232 269 0 0 chr10 14528740 14528792 -131060496 + (TATG)n Simple_repeat Simple_repeat 1 52 0 1881 204 34 0 chr10 14529799 14530152 -131059136 + MLT1A1 LTR MaLR 1 365 0 2226 110 0 22 chr10 14530596 14530915 -131058373 + AluSx SINE Alu 1 312 0 381 315 109 38 chr10 14531129 14531367 -131057921 - MIR SINE MIR 0 262 8 335 114 107 0 chr10 14531606 14531913 -131057375 + (TA)n Simple_repeat Simple_repeat 1 339 0 201 339 57 24 chr10 14531936 14532060 -131057228 + L2 LINE L2 2600 2727 -587 2470 73 0 16 chr10 14532137 14532451 -131056837 - AluY SINE Alu -2 309 1 372 336 14 21 chr10 14532593 14532733 -131056555 + MIR SINE MIR 1 139 -123 1072 235 13 13 chr10 14533185 14533423 -131055865 + MER8 DNA MER2_type 2 239 0 582 171 0 27 chr10 14533529 14533640 -131055648 - FLAM_A SINE Alu -5 137 30 504 0 0 0 chr10 14535470 14535526 -131053762 + (CACAA)n Simple_repeat Simple_repeat 4 59 0 1519 143 0 0 chr10 14535988 14536205 -131053083 + AluSx SINE Alu 1 217 -95 916 277 92 60 chr10 14536905 14537392 -131051896 + MLT1J LTR MaLR 7 509 -2 261 299 0 0 chr10 14538444 14538521 -131050767 + MER116 DNA Mariner 3 79 -1 861 170 0 0 chr10 14539027 14539168 -131050120 + FLAM_C SINE Alu 1 141 -2 1470 221 215 67 chr10 14539274 14540451 -131048837 - L1MC5 LINE L1 -226 7735 6379 4101 107 19 0 chr10 14540534 14541106 -131048182 + L1PA16 LINE L1 5575 6157 -9 1694 279 59 28 chr10 14541331 14541977 -131047311 - L1MC4a LINE L1 -1780 6028 5363 2157 100 3 44 chr10 14543433 14543753 -131045535 + AluSx SINE Alu 1 307 -5 864 131 23 0 chr10 14543761 14543891 -131045397 + AluJb SINE Alu 172 304 -8 315 0 0 0 chr10 14544375 14544410 -131044878 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 886 167 19 0 chr10 14544565 14544721 -131044567 - FRAM SINE Alu -2 174 16 1417 193 49 10 chr10 14544727 14545033 -131044255 - L1MB2 LINE L1 -2 6169 5852 210 71 0 0 chr10 14545285 14545313 -131043975 + (A)n Simple_repeat Simple_repeat 1 28 0 1216 253 0 20 chr10 14545852 14546156 -131043132 - AluSx SINE Alu -2 300 3 272 250 20 30 chr10 14548273 14548373 -131040915 - MIR3 SINE MIR -28 180 82 409 170 0 47 chr10 14548467 14548573 -131040715 + L1M LINE L1 5291 5391 -789 2124 128 0 0 chr10 14549388 14549685 -131039603 - AluSx SINE Alu -15 297 1 2509 161 9 36 chr10 14550055 14550501 -131038787 + Tigger2a DNA MER2_type 1 434 0 192 152 0 0 chr10 14550627 14550660 -131038628 + (TG)n Simple_repeat Simple_repeat 1 33 0 180 176 0 0 chr10 14550671 14550705 -131038583 + CT-rich Low_complexity Low_complexity 1 34 0 415 241 46 0 chr10 14552020 14552128 -131037160 - MER33 DNA MER1_type -211 113 1 2226 157 78 2 chr10 14552358 14552754 -131036534 + MSTB LTR MaLR 1 426 0 596 290 15 25 chr10 14553801 14554001 -131035287 + LTR16B LTR ERVL 5 202 -262 267 263 40 13 chr10 14553983 14554059 -131035229 + LTR16B LTR ERVL 385 462 -2 * 264 229 16 0 chr10 14554107 14554168 -131035120 + L2 LINE L2 3250 3311 -2 193 293 17 0 chr10 14554576 14554634 -131034654 - L2 LINE L2 -1 3312 3254 300 197 28 14 chr10 14555014 14555085 -131034203 + MER5A DNA MER1_type 91 162 -27 231 247 56 135 chr10 14555345 14555379 -131033909 + LTR67 LTR ERVL 387 422 -135 2444 126 22 0 chr10 14555379 14555735 -131033553 - THE1B LTR MaLR 0 364 1 231 247 56 135 chr10 14555735 14555878 -131033410 + LTR67 LTR ERVL 422 550 -7 210 333 95 48 chr10 14557060 14557249 -131032039 + L2 LINE L2 2894 3091 -181 201 195 24 0 chr10 14557310 14557351 -131031937 + L2 LINE L2 3231 3272 0 309 151 288 0 chr10 14557451 14557524 -131031764 + MLT1J1 LTR MaLR 1 94 -352 332 262 8 74 chr10 14557569 14557691 -131031597 + MLT1J2 LTR MaLR 337 450 0 548 282 11 40 chr10 14557895 14557945 -131031343 - MER5A DNA MER1_type -14 175 125 2184 137 0 0 chr10 14557945 14558251 -131031037 + AluSx SINE Alu 1 306 -6 548 282 11 40 chr10 14558251 14558374 -131030914 - MER5A DNA MER1_type -64 125 7 356 301 80 6 chr10 14558464 14558627 -131030661 - MER5A DNA MER1_type -14 175 1 467 281 65 55 chr10 14558634 14558851 -131030437 + MIR SINE MIR 16 234 -28 432 280 53 26 chr10 14558889 14559075 -131030213 + MIR SINE MIR 19 208 -54 1482 111 13 25 chr10 14559207 14559245 -131030043 - L1MA5A LINE L1 -5 6292 6255 2706 120 24 19 chr10 14559245 14559671 -131029617 - MSTA LTR MaLR 0 428 1 1482 111 13 25 chr10 14559671 14559867 -131029421 - L1MA5A LINE L1 -42 6255 6061 339 169 67 22 chr10 14559867 14559956 -131029332 + L1MC5 LINE L1 7833 7925 -36 181 73 24 24 chr10 14559973 14560014 -131029274 + (CAAAA)n Simple_repeat Simple_repeat 1 41 0 232 316 0 13 chr10 14561045 14561121 -131028167 + MIR SINE MIR 37 111 -97 368 253 77 71 chr10 14561123 14561253 -131028035 - MIR SINE MIR -33 229 96 2235 110 0 0 chr10 14561253 14561580 -131027708 + AluSx SINE Alu 1 312 0 368 253 77 71 chr10 14561580 14561631 -131027657 - MIR SINE MIR -166 96 47 276 186 0 0 chr10 14562573 14562632 -131026656 + (CA)n Simple_repeat Simple_repeat 1 59 0 375 23 0 0 chr10 14562719 14562763 -131026525 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 2240 107 0 3 chr10 14563029 14563328 -131025960 - AluSc SINE Alu -11 298 1 322 310 11 0 chr10 14563818 14563905 -131025383 - L2 LINE L2 -51 3221 3134 429 296 18 12 chr10 14564078 14564247 -131025041 + MLT1L LTR MaLR 410 579 -36 298 167 19 0 chr10 14564421 14564475 -131024813 + MIR SINE MIR 110 164 -98 1810 186 0 6 chr10 14564770 14565262 -131024026 - AluJb SINE Alu 0 312 2 333 0 0 0 chr10 14566231 14566268 -131023020 + (TA)n Simple_repeat Simple_repeat 2 38 0 30 27 0 0 chr10 14567082 14567119 -131022169 + AT_rich Low_complexity Low_complexity 1 37 0 1504 165 57 25 chr10 14567131 14567410 -131021878 - AluJo SINE Alu -24 288 1 1979 124 31 7 chr10 14568872 14569163 -131020125 + AluSx SINE Alu 1 298 -14 930 204 3 0 chr10 14571108 14571404 -131017884 + (TGGA)n Simple_repeat Simple_repeat 1 297 0 746 202 6 0 chr10 14571420 14571598 -131017690 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 3021 107 9 5 chr10 14572021 14572453 -131016835 + MER57B LTR ERV1 1 434 0 4120 91 12 116 chr10 14573031 14573771 -131015517 + MER4A LTR ERV1 2 664 0 365 270 63 0 chr10 14575021 14575132 -131014156 - L2 LINE L2 -1 3271 3154 2362 88 7 3 chr10 14575338 14575645 -131013643 + AluSg SINE Alu 1 308 -2 1725 204 0 6 chr10 14576295 14576609 -131012679 - AluJo SINE Alu 0 312 1 1996 134 0 3 chr10 14576918 14577222 -131012066 - AluSx SINE Alu 0 303 1 241 250 0 0 chr10 14578660 14578712 -131010576 + (TG)n Simple_repeat Simple_repeat 2 53 0 299 253 20 20 chr10 14579471 14579570 -131009718 - MIR3 SINE MIR -28 180 82 4693 149 57 7 chr10 14579672 14580461 -131008827 + L1MB3 LINE L1 5308 6142 -41 1809 154 21 3 chr10 14580461 14580768 -131008520 - AluSx SINE Alu 0 312 1 4693 149 57 7 chr10 14580768 14580810 -131008478 + L1MB3 LINE L1 6142 6180 -3 192 125 0 0 chr10 14581175 14581207 -131008081 + (GGGGA)n Simple_repeat Simple_repeat 4 35 0 181 269 19 0 chr10 14581790 14581842 -131007446 - MIR3 SINE MIR -25 183 131 231 270 54 27 chr10 14581859 14581970 -131007318 - L2 LINE L2 -809 2505 2392 256 305 116 32 chr10 14582044 14582139 -131007149 + MIR3 SINE MIR 4 106 -102 453 285 0 31 chr10 14582512 14582642 -131006646 - MIR SINE MIR -129 133 8 655 221 68 0 chr10 14582898 14583061 -131006227 + MIR SINE MIR 64 237 -25 228 111 0 0 chr10 14583259 14583295 -131005993 + (CACAA)n Simple_repeat Simple_repeat 2 37 0 3002 140 100 2 chr10 14584199 14584679 -131004609 - MER1A DNA MER1_type 0 527 1 532 237 84 28 chr10 14584702 14584917 -131004371 + MIR SINE MIR 28 254 -8 2438 82 3 3 chr10 14585341 14585644 -131003644 + AluSg SINE Alu 1 303 -7 1620 159 3 97 chr10 14586207 14586528 -131002760 - AluJo SINE Alu -10 292 2 2217 129 140 11 chr10 14586710 14587089 -131002199 - MSTA LTR MaLR 0 428 1 2270 200 39 6 chr10 14588001 14588511 -131000777 + L1PA16 LINE L1 5624 6150 -16 241 224 0 0 chr10 14588557 14588606 -131000682 + CT-rich Low_complexity Low_complexity 3 51 0 2458 81 3 3 chr10 14588977 14589286 -131000002 - AluY SINE Alu -2 309 1 1495 168 4 15 chr10 14589454 14589716 -130999572 + AluJo SINE Alu 41 299 -13 425 242 74 37 chr10 14590213 14590403 -130998885 - MER117 DNA MER1_type 0 197 1 569 287 146 29 chr10 14590541 14590959 -130998329 + LTR33A LTR ERVL 23 489 -34 1559 170 18 18 chr10 14591873 14592155 -130997133 + AluJo SINE Alu 9 290 -22 492 272 96 83 chr10 14592806 14593130 -130996158 + L1ME3A LINE L1 5553 5880 -284 1635 184 3 20 chr10 14595192 14595491 -130993797 + AluJo SINE Alu 12 305 -7 264 185 0 0 chr10 14595491 14595545 -130993743 + GA-rich Low_complexity Low_complexity 2 55 0 965 144 0 6 chr10 14595547 14595727 -130993561 + (GGA)n Simple_repeat Simple_repeat 1 179 0 322 152 15 15 chr10 14596089 14596155 -130993133 - MER33 DNA MER1_type -4 320 255 5039 141 26 54 chr10 14596156 14596620 -130992668 + L1MA4A LINE L1 4326 4801 -1375 2046 131 3 3 chr10 14596620 14596911 -130992377 + AluSx SINE Alu 1 291 -21 5039 141 26 54 chr10 14596911 14597586 -130991702 + L1MA4A LINE L1 4801 5433 -743 5112 126 37 20 chr10 14597657 14597808 -130991480 + L1MA4A LINE L1 5433 5580 -723 2289 97 0 7 chr10 14597808 14598108 -130991180 - AluSq SINE Alu -15 298 1 5112 126 37 20 chr10 14598108 14598812 -130990476 + L1MA4A LINE L1 5580 6303 0 895 218 28 23 chr10 14598883 14599099 -130990189 - MER33 DNA MER1_type -106 218 2 228 35 0 0 chr10 14599483 14599512 -130989776 + (T)n Simple_repeat Simple_repeat 1 29 0 197 245 0 41 chr10 14600449 14600498 -130988790 + L2 LINE L2 3224 3270 -2 264 320 68 27 chr10 14601488 14601635 -130987653 + MIR SINE MIR 34 186 -76 1140 110 129 29 chr10 14601638 14601847 -130987441 - MER30 DNA MER1_type 0 230 1 5205 149 22 10 chr10 14601880 14602872 -130986416 + L1PA16 LINE L1 5159 6163 -3 213 205 24 60 chr10 14602921 14603087 -130986201 + (TATAA)n Simple_repeat Simple_repeat 3 162 0 181 325 48 0 chr10 14603747 14603830 -130985458 - L2 LINE L2 0 3272 3186 780 226 73 8 chr10 14603831 14604079 -130985209 + L1MA4 LINE L1 6029 6292 -8 2111 138 0 22 chr10 14604102 14604421 -130984867 + AluSx SINE Alu 1 312 0 276 253 103 0 chr10 14605042 14605129 -130984159 + MER63 DNA MER1_type 1 722 -340 310 285 263 0 chr10 14605534 14605713 -130983575 - MIR SINE MIR 0 262 37 1589 205 61 49 chr10 14606083 14606512 -130982776 + LTR47B LTR ERVL 10 443 0 219 324 69 59 chr10 14606573 14606777 -130982511 - L3b LINE CR1 -195 1388 1183 227 189 22 22 chr10 14607632 14607722 -130981566 + CT-rich Low_complexity Low_complexity 1 90 0 205 138 0 0 chr10 14610412 14610441 -130978847 + (GGA)n Simple_repeat Simple_repeat 2 30 0 277 131 33 0 chr10 14611117 14611178 -130978110 + CT-rich Low_complexity Low_complexity 1 63 0 335 60 20 0 chr10 14611387 14611437 -130977851 + (TTCA)n Simple_repeat Simple_repeat 2 52 0 444 19 0 0 chr10 14611723 14611776 -130977512 + (TG)n Simple_repeat Simple_repeat 1 53 0 1834 153 10 10 chr10 14612379 14612673 -130976615 - AluJo SINE Alu -10 302 9 351 274 9 38 chr10 14612949 14613055 -130976233 - L2 LINE L2 0 3313 3211 2316 96 3 3 chr10 14613323 14613626 -130975662 - AluSc SINE Alu -4 305 3 1635 157 98 11 chr10 14614042 14614329 -130974959 - AluSx SINE Alu 0 312 1 309 298 8 24 chr10 14614833 14614957 -130974331 - MIR SINE MIR -9 253 132 200 333 0 0 chr10 14615192 14615255 -130974033 - L2 LINE L2 0 3313 3251 2062 145 7 7 chr10 14616608 14616918 -130972370 + AluSx SINE Alu 1 310 -2 253 265 159 8 chr10 14617019 14617151 -130972137 - MIR SINE MIR -10 252 101 356 200 35 0 chr10 14618461 14618546 -130970742 - L1MA7 LINE L1 0 6291 6204 1920 159 0 14 chr10 14618553 14618849 -130970439 - AluJb SINE Alu -18 294 3 1469 192 4 29 chr10 14619118 14619394 -130969894 + AluJo SINE Alu 5 273 -39 1846 81 95 32 chr10 14620977 14621260 -130968028 - AluSg SINE Alu -1 309 9 26 0 0 0 chr10 14621659 14621685 -130967603 + AT_rich Low_complexity Low_complexity 1 26 0 183 80 0 0 chr10 14622994 14623019 -130966269 + (A)n Simple_repeat Simple_repeat 1 25 0 263 230 30 30 chr10 14623123 14623223 -130966065 + MER72 LTR ERV1 377 476 -246 394 196 155 21 chr10 14623248 14623446 -130965842 + LTR45B LTR ERV1 264 525 0 1446 207 21 17 chr10 14623704 14623994 -130965294 + AluJo SINE Alu 11 301 -11 261 139 0 0 chr10 14623994 14624037 -130965251 + (GGGA)n Simple_repeat Simple_repeat 1 43 0 281 260 140 0 chr10 14624132 14624232 -130965056 - MIR3 SINE MIR -10 198 85 772 186 0 7 chr10 14624445 14624585 -130964703 + AluJb SINE Alu 92 230 -82 1503 194 0 4 chr10 14625514 14625782 -130963506 + AluJb SINE Alu 36 302 -10 2368 95 0 0 chr10 14626148 14626444 -130962844 + AluSq SINE Alu 1 296 -17 182 275 50 25 chr10 14626546 14626626 -130962662 - MIR SINE MIR -93 115 34 189 244 0 0 chr10 14626981 14627022 -130962266 - MIR SINE MIR -110 152 112 473 162 49 162 chr10 14627165 14627220 -130962068 - LTR45B LTR ERV1 -15 474 414 1469 175 13 58 chr10 14627220 14627529 -130961759 - AluJo SINE Alu -4 308 14 473 162 49 162 chr10 14627529 14627706 -130961582 - LTR45B LTR ERV1 -75 414 304 180 0 0 0 chr10 14628662 14628682 -130960606 + (TC)n Simple_repeat Simple_repeat 1 20 0 237 146 0 0 chr10 14630302 14630350 -130958938 + (CA)n Simple_repeat Simple_repeat 1 48 0 31 44 0 0 chr10 14630540 14630585 -130958703 + AT_rich Low_complexity Low_complexity 1 45 0 205 273 0 0 chr10 14631064 14631119 -130958169 + (TTCA)n Simple_repeat Simple_repeat 4 58 0 2388 56 0 3 chr10 14631186 14631492 -130957796 + AluY SINE Alu 1 311 0 231 188 20 59 chr10 14631634 14631735 -130957553 + (TTATA)n Simple_repeat Simple_repeat 2 98 0 309 155 0 0 chr10 14632988 14633046 -130956242 + (CA)n Simple_repeat Simple_repeat 1 58 0 1934 115 87 0 chr10 14634231 14634517 -130954771 - AluSq SINE Alu -2 311 1 584 261 102 28 chr10 14635634 14635849 -130953439 + MIR SINE MIR 32 262 0 414 0 0 0 chr10 14636139 14636185 -130953103 + (TTTA)n Simple_repeat Simple_repeat 3 48 0 664 138 0 43 chr10 14636188 14636304 -130952984 - AluSg/x SINE Alu -26 283 173 1764 130 0 0 chr10 14636304 14636543 -130952745 - AluSq SINE Alu -71 242 4 27 29 0 0 chr10 14636714 14636748 -130952540 + AT_rich Low_complexity Low_complexity 1 34 0 601 123 29 36 chr10 14636748 14636886 -130952402 - L1MA7 LINE L1 -2 6289 6153 951 129 17 51 chr10 14636886 14637064 -130952224 - AluJo SINE Alu -17 295 124 1576 107 4 25 chr10 14637152 14637394 -130951894 - AluSx SINE Alu -16 296 60 1351 231 207 17 chr10 14637594 14638251 -130951037 + LTR50 LTR ERVL 14 795 0 2239 90 0 45 chr10 14638708 14639018 -130950270 + AluSg SINE Alu 1 296 -14 2273 81 3 0 chr10 14639247 14639565 -130949723 - AluSx SINE Alu 0 319 1 1910 157 3 3 chr10 14639643 14639937 -130949351 - AluJb SINE Alu -18 294 1 1736 160 20 20 chr10 14641006 14641300 -130947988 + AluJb SINE Alu 1 294 -18 234 91 0 0 chr10 14641908 14641941 -130947347 + (T)n Simple_repeat Simple_repeat 1 33 0 696 217 6 12 chr10 14642055 14642216 -130947072 - MER3 DNA MER1_type -43 166 7 2226 125 0 0 chr10 14642389 14642694 -130946594 + AluSx SINE Alu 1 305 -7 2044 130 0 37 chr10 14643380 14643704 -130945584 + AluSx SINE Alu 1 312 0 561 287 81 60 chr10 14643748 14644096 -130945192 + L1ME4a LINE L1 5524 5878 -243 1469 77 10 0 chr10 14644103 14644297 -130944991 - Charlie3 DNA MER1_type -4 2706 2511 196 287 49 63 chr10 14644394 14644537 -130944751 + MIR SINE MIR 117 257 -5 297 0 0 0 chr10 14644552 14644585 -130944703 + (CA)n Simple_repeat Simple_repeat 1 33 0 344 245 109 54 chr10 14644595 14644742 -130944546 + L1ME4a LINE L1 5964 6118 -3 1625 182 17 7 chr10 14644784 14645075 -130944213 + AluJo SINE Alu 1 294 -18 281 171 0 43 chr10 14645983 14646053 -130943235 - MLT1C LTR MaLR -202 265 199 283 186 35 115 chr10 14646221 14646334 -130942954 + MLT1B LTR MaLR 76 179 -288 2193 59 96 0 chr10 14646335 14646605 -130942683 + AluY SINE Alu 5 300 -11 1001 170 0 13 chr10 14646605 14646764 -130942524 + AluJb SINE Alu 135 291 -21 638 195 17 126 chr10 14646774 14646985 -130942303 + MLT1B LTR MaLR 185 371 -19 1616 179 135 3 chr10 14646985 14647304 -130941984 + MLT1A1 LTR MaLR 1 361 -4 638 195 17 126 chr10 14647304 14647323 -130941965 + MLT1B LTR MaLR 371 390 0 256 250 120 11 chr10 14647432 14647524 -130941764 - L2 LINE L2 -18 3254 3153 1992 138 0 3 chr10 14647581 14647894 -130941394 - AluSg SINE Alu 0 312 1 555 314 54 8 chr10 14648050 14648292 -130940996 - MIR SINE MIR -2 260 8 1752 173 0 24 chr10 14649820 14650143 -130939145 + AluJo SINE Alu 1 316 0 556 292 109 0 chr10 14650171 14650363 -130938925 - MIR SINE MIR -3 259 47 1447 137 48 36 chr10 14650582 14650830 -130938458 + THE1B LTR MaLR 1 251 -113 * 1674 122 4 4 chr10 14650825 14651071 -130938217 + THE1B LTR MaLR 119 364 0 234 254 0 0 chr10 14651089 14651152 -130938136 + MER91 DNA MER1_type 78 140 0 474 325 76 0 chr10 14651214 14651371 -130937917 + MIR3 SINE MIR 29 197 -11 820 152 23 8 chr10 14653251 14653383 -130935905 + AluSq/x SINE Alu 2 135 -178 2010 142 30 57 chr10 14654111 14654477 -130934811 + THE1B LTR MaLR 1 356 -8 281 384 29 0 chr10 14654512 14654650 -130934638 + MER91A DNA MER1_type 47 188 -8 2148 128 3 0 chr10 14654694 14654991 -130934297 - AluSx SINE Alu -14 298 1 557 129 20 30 chr10 14655434 14655535 -130933753 + AluSq SINE Alu 2 101 -211 428 17 83 33 chr10 14655535 14655595 -130933693 - THE1B LTR MaLR -301 63 1 1819 88 0 0 chr10 14655620 14655847 -130933441 + AluSq SINE Alu 87 313 0 193 154 0 26 chr10 14656259 14656298 -130932990 - L2 LINE L2 -13 3300 3263 477 34 0 0 chr10 14657642 14657701 -130931587 + (TG)n Simple_repeat Simple_repeat 2 60 0 1702 147 19 8 chr10 14658448 14658713 -130930575 - AluJo SINE Alu -39 273 6 1882 126 4 22 chr10 14659661 14659938 -130929350 + AluSx SINE Alu 1 272 -40 243 61 0 0 chr10 14659952 14659985 -130929303 + (CAA)n Simple_repeat Simple_repeat 1 33 0 1950 164 3 0 chr10 14660321 14660625 -130928663 + AluJb SINE Alu 1 305 -7 222 37 0 0 chr10 14660625 14660652 -130928636 + (GA)n Simple_repeat Simple_repeat 2 28 0 768 77 77 62 chr10 14662970 14663100 -130926188 - L1PA8 LINE L1 -1 6171 6040 277 305 86 8 chr10 14663118 14663246 -130926042 + L2 LINE L2 2218 2355 -959 804 196 10 95 chr10 14663290 14663575 -130925713 - MLT1B LTR MaLR -31 359 1 195 328 90 44 chr10 14663648 14664035 -130925253 + L2 LINE L2 2567 2970 -343 212 239 22 0 chr10 14664056 14664102 -130925186 + CT-rich Low_complexity Low_complexity 2 48 0 2296 125 0 0 chr10 14664102 14664413 -130924875 - AluSx SINE Alu -1 311 1 286 250 53 83 chr10 14664563 14664695 -130924593 + L2 LINE L2 3184 3311 -2 2195 113 7 0 chr10 14664741 14665032 -130924256 - AluSc SINE Alu -15 294 2 425 293 9 0 chr10 14665184 14665300 -130923988 - MER94 DNA DNA -4 130 14 216 122 0 0 chr10 14665939 14665980 -130923308 + (T)n Simple_repeat Simple_repeat 1 41 0 1245 188 21 25 chr10 14666360 14666599 -130922689 - AluJo SINE Alu -73 239 2 491 343 64 4 chr10 14667146 14667382 -130921906 + MIR SINE MIR 13 262 0 6124 199 13 4 chr10 14667483 14668208 -130921080 - L1PA15 LINE L1 0 6165 5448 2361 80 0 13 chr10 14668208 14668507 -130920781 - AluY SINE Alu -16 295 1 6124 199 13 4 chr10 14668507 14669814 -130919474 - L1PA15 LINE L1 -717 5448 4121 390 236 242 13 chr10 14669828 14670045 -130919243 + MIR SINE MIR 3 262 0 2048 117 3 20 chr10 14670149 14670448 -130918840 + AluSx SINE Alu 1 294 -18 2334 62 3 0 chr10 14672020 14672310 -130916978 - AluY SINE Alu -20 291 1 243 0 0 0 chr10 14673858 14673885 -130915403 + (A)n Simple_repeat Simple_repeat 1 27 0 443 122 0 27 chr10 14673899 14673973 -130915315 - AluJo SINE Alu -178 134 63 2148 130 0 3 chr10 14674187 14674494 -130914794 - AluSx SINE Alu -6 306 1 437 299 136 27 chr10 14675002 14675223 -130914065 - MIR SINE MIR -8 254 10 3722 80 0 0 chr10 14675379 14675842 -130913446 - L1PA8 LINE L1 0 6172 5710 2381 59 0 0 chr10 14676209 14676523 -130912765 + AluY SINE Alu 1 314 0 1076 239 8 8 chr10 14679640 14679891 -130909397 + L1MB3 LINE L1 5534 5784 -387 258 136 0 0 chr10 14679898 14679942 -130909346 + (TCCA)n Simple_repeat Simple_repeat 1 44 0 2131 124 46 66 chr10 14679942 14680052 -130909236 + L1MB3 LINE L1 5782 5893 -290 1883 137 105 37 chr10 14680052 14680403 -130908885 + THE1C LTR MaLR 1 375 0 2131 124 46 66 chr10 14680403 14680702 -130908586 + L1MB3 LINE L1 5893 6183 0 369 245 46 46 chr10 14681118 14681269 -130908019 + MLT1I LTR MaLR 16 166 -243 264 305 195 6 chr10 14681501 14681675 -130907613 - MIR SINE MIR -36 226 20 220 313 187 11 chr10 14682094 14682276 -130907012 + MIR SINE MIR 1 214 -48 2352 134 45 18 chr10 14682356 14682736 -130906552 + MLT1B LTR MaLR 1 390 0 462 296 0 0 chr10 14683238 14683493 -130905795 + (CA)n Simple_repeat Simple_repeat 1 255 0 345 117 0 0 chr10 14684358 14684418 -130904870 + (TC)n Simple_repeat Simple_repeat 2 61 0 248 316 42 11 chr10 14684965 14685060 -130904228 - MIR SINE MIR -6 256 159 253 231 0 177 chr10 14685887 14685932 -130903356 - MIR SINE MIR -67 141 90 2214 123 0 3 chr10 14685932 14686240 -130903048 + AluSx SINE Alu 1 307 -5 253 231 0 177 chr10 14686240 14686360 -130902928 - MIR SINE MIR -118 90 2 468 285 47 28 chr10 14686447 14686661 -130902627 + L1ME LINE L1 5597 5814 -307 2009 103 35 14 chr10 14686812 14687124 -130902164 - AluSq SINE Alu 0 313 1 1380 213 86 98 chr10 14687938 14688487 -130900801 + MLT1F LTR MaLR 1 542 0 491 243 57 110 chr10 14688559 14688822 -130900466 + MIR SINE MIR 13 261 -1 3144 216 118 29 chr10 14688903 14689790 -130899498 - L1MC4 LINE L1 -1 8041 7059 227 79 26 0 chr10 14689790 14689828 -130899460 + (TTCA)n Simple_repeat Simple_repeat 4 42 0 3144 216 118 29 chr10 14689828 14689908 -130899380 - L1MC4 LINE L1 -983 7059 6988 370 0 0 0 chr10 14691615 14691658 -130897630 + L1PA3 LINE L1 6110 6152 -3 2034 142 0 10 chr10 14692585 14692887 -130896401 + AluSx SINE Alu 2 300 -12 375 281 54 37 chr10 14692919 14693268 -130896020 + L1ME1 LINE L1 4258 4612 -1534 28 0 0 0 chr10 14693277 14693305 -130895983 + AT_rich Low_complexity Low_complexity 1 28 0 825 177 0 41 chr10 14693565 14693712 -130895576 + FLAM_C SINE Alu 2 142 -1 2012 138 0 7 chr10 14693910 14694207 -130895081 + AluSx SINE Alu 1 295 -17 1739 220 68 20 chr10 14694363 14694804 -130894484 + MLT1C LTR MaLR 6 467 0 3091 230 73 32 chr10 14694809 14696033 -130893255 + L1ME1 LINE L1 4882 6161 -5 23 54 0 0 chr10 14696222 14696259 -130893029 + AT_rich Low_complexity Low_complexity 1 37 0 353 225 172 33 chr10 14697720 14697871 -130891417 + MIR3 SINE MIR 5 176 -32 393 351 27 20 chr10 14698527 14698675 -130890613 + MIR3 SINE MIR 42 190 -18 360 0 0 0 chr10 14698805 14698845 -130890443 + (CA)n Simple_repeat Simple_repeat 2 41 0 248 299 0 11 chr10 14698845 14698932 -130890356 + CT-rich Low_complexity Low_complexity 4 89 0 291 304 80 32 chr10 14699117 14699242 -130890046 + MIR SINE MIR 58 188 -74 346 248 66 8 chr10 14700958 14701079 -130888209 - MIR SINE MIR -48 214 87 201 343 27 0 chr10 14701347 14701420 -130887868 - L2 LINE L2 0 3272 3198 2236 85 0 7 chr10 14701642 14701935 -130887353 - AluSg SINE Alu -19 291 1 921 150 26 107 chr10 14702960 14703193 -130886095 - MER20 DNA MER1_type -5 214 1 303 28 0 0 chr10 14703354 14703390 -130885898 + (TG)n Simple_repeat Simple_repeat 1 36 0 352 289 106 59 chr10 14704191 14704385 -130884903 - MIR SINE MIR -55 207 1 1539 196 44 69 chr10 14706146 14706578 -130882710 - MLT1D LTR MaLR 0 505 85 246 178 0 0 chr10 14706578 14706623 -130882665 + MLT2B3 LTR ERVL 1 45 -509 1800 201 5 62 chr10 14706804 14707193 -130882095 + MLT2B3 LTR ERVL 182 548 -6 609 157 0 0 chr10 14707197 14707286 -130882002 - MLT1D LTR MaLR -415 90 2 2834 194 55 19 chr10 14707515 14707727 -130881561 - MER6A DNA MER2_type -260 605 402 2144 176 106 3 chr10 14707727 14708113 -130881175 - MSTB LTR MaLR 0 426 1 2834 194 55 19 chr10 14708113 14708484 -130880804 - MER6A DNA MER2_type -463 402 1 43 20 0 0 chr10 14708807 14708857 -130880431 + AT_rich Low_complexity Low_complexity 1 50 0 305 305 40 20 chr10 14709062 14709213 -130880075 - MLT1I LTR MaLR -188 221 68 477 66 16 0 chr10 14709454 14709515 -130879773 - MSTB LTR MaLR -49 377 316 1543 201 39 7 chr10 14709786 14709912 -130879376 + AluSx SINE Alu 1 122 -190 468 51 0 0 chr10 14709912 14709971 -130879317 + (CA)n Simple_repeat Simple_repeat 2 60 0 1543 201 39 7 chr10 14709971 14710127 -130879161 + AluSx SINE Alu 122 292 -20 277 196 36 0 chr10 14710704 14710760 -130878528 - L2 LINE L2 0 3272 3215 196 188 203 47 chr10 14711212 14711276 -130878012 - MIR SINE MIR -70 138 65 1789 185 3 0 chr10 14712617 14712919 -130876369 + AluJo SINE Alu 1 303 -9 252 345 83 7 chr10 14712928 14713073 -130876215 + MIR3 SINE MIR 37 192 -16 1668 181 17 0 chr10 14713734 14714022 -130875266 - AluJb SINE Alu -19 293 1 1870 186 42 31 chr10 14714130 14714490 -130874798 + MLT1A1 LTR MaLR 2 365 0 2034 127 6 38 chr10 14716043 14716359 -130872929 - AluSx SINE Alu -6 306 1 200 327 125 0 chr10 14716601 14716705 -130872583 - MIR SINE MIR -62 200 84 314 244 200 0 chr10 14716774 14716889 -130872399 - MIR3 SINE MIR -61 147 10 732 186 0 0 chr10 14717176 14717289 -130871999 - FLAM_A SINE Alu -12 130 18 1820 153 26 110 chr10 14717692 14717844 -130871444 + MLT1B LTR MaLR 1 164 -226 2402 103 3 0 chr10 14717844 14718156 -130871132 - AluSp SINE Alu 0 313 1 1820 153 26 110 chr10 14718156 14718429 -130870859 + MLT1B LTR MaLR 164 390 0 1130 133 0 0 chr10 14718431 14718604 -130870684 - L1MB3 LINE L1 -10 6173 6001 2028 154 31 34 chr10 14718769 14719126 -130870162 - THE1B LTR MaLR -8 356 1 180 279 38 51 chr10 14720594 14720673 -130868615 + MIR SINE MIR 38 115 -147 499 327 22 22 chr10 14720688 14720914 -130868374 - MIR SINE MIR 0 262 37 250 286 95 16 chr10 14720928 14721054 -130868234 + MIR SINE MIR 119 254 -8 2135 115 0 16 chr10 14721230 14721534 -130867754 + AluY SINE Alu 1 299 -12 368 262 0 29 chr10 14721692 14721795 -130867493 + L2 LINE L2 2985 3084 -188 319 296 180 5 chr10 14722409 14722598 -130866690 + MIR SINE MIR 31 252 -10 221 341 65 8 chr10 14724173 14724296 -130864992 + L2 LINE L2 3184 3313 0 30 0 0 0 chr10 14725434 14725464 -130863824 + AT_rich Low_complexity Low_complexity 1 30 0 5168 142 15 35 chr10 14725464 14726456 -130862832 - L1MB1 LINE L1 0 6168 5194 * 5448 199 46 11 chr10 14726455 14727643 -130861645 + L1MB1 LINE L1 3960 5189 -957 415 212 80 29 chr10 14727654 14727791 -130861497 + MIR SINE MIR 119 262 0 1236 283 169 27 chr10 14728304 14729383 -130859905 + L1ME3 LINE L1 3768 4693 -1469 2322 96 0 3 chr10 14729383 14729675 -130859613 + AluY SINE Alu 1 291 -20 1236 283 169 27 chr10 14729675 14729951 -130859337 + L1ME3 LINE L1 4693 4929 -1233 2262 160 79 5 chr10 14729951 14730320 -130858968 + MSTD LTR MaLR 1 396 0 1236 283 169 27 chr10 14730320 14730860 -130858428 + L1ME3 LINE L1 4929 5951 -211 503 267 62 11 chr10 14733753 14733929 -130855359 - MER117 DNA MER1_type -10 187 3 181 255 20 71 chr10 14734674 14734772 -130854516 - L2 LINE L2 -706 2608 2516 * 236 330 198 0 chr10 14734754 14734860 -130854428 + MIR3 SINE MIR 34 160 -48 1068 214 35 0 chr10 14734871 14735072 -130854216 + MER58A DNA MER1_type 17 224 0 562 266 155 29 chr10 14735177 14735455 -130853833 - Charlie8 DNA MER1_type -2008 409 97 292 312 28 0 chr10 14735860 14735969 -130853319 + MER81 DNA DNA 2 113 -1 245 317 130 8 chr10 14736310 14736433 -130852855 - MIR SINE MIR -67 195 58 250 386 0 0 chr10 14736613 14736727 -130852561 + L3b LINE CR1 1120 1233 -350 224 208 292 0 chr10 14737329 14737401 -130851887 + MIR SINE MIR 55 147 -61 1601 265 77 42 chr10 14737686 14738247 -130851041 + MER77 LTR ERV1 49 598 -7 774 268 127 0 chr10 14739286 14739491 -130849797 + MIR SINE MIR 6 236 -26 339 313 57 57 chr10 14739927 14740103 -130849185 + MER5B DNA MER1_type 1 176 -2 582 211 176 0 chr10 14740123 14740265 -130849023 - MER5A DNA MER1_type -3 186 20 3366 160 5 55 chr10 14740617 14741266 -130848022 - L1MB3 LINE L1 -174 6009 5394 1191 240 59 52 chr10 14741555 14741963 -130847325 + LTR16C LTR ERVL 81 491 0 3478 107 18 10 chr10 14742509 14743004 -130846284 + L1PA11 LINE L1 5659 6157 -17 21 0 0 0 chr10 14745256 14745277 -130844011 + AT_rich Low_complexity Low_complexity 1 21 0 1591 207 0 0 chr10 14746034 14746314 -130842974 + AluJb SINE Alu 1 280 -32 191 0 24 71 chr10 14746317 14746359 -130842929 + (CAAAA)n Simple_repeat Simple_repeat 2 41 0 266 336 19 19 chr10 14746369 14746476 -130842812 + MER5A DNA MER1_type 83 189 0 2209 174 36 128 chr10 14747198 14747872 -130841416 + LTR9 LTR ERV1 1 612 0 797 269 26 19 chr10 14749288 14749556 -130839732 + L1MC4a LINE L1 5559 5828 -1980 1156 175 0 10 chr10 14749558 14749764 -130839524 + AluJb SINE Alu 105 308 -4 1728 179 0 32 chr10 14749945 14750258 -130839030 + AluJo SINE Alu 3 305 -7 513 337 20 0 chr10 14750822 14751018 -130838270 - LTR67 LTR ERVL 0 557 358 733 170 50 66 chr10 14751332 14751514 -130837774 + MLT1L LTR MaLR 216 394 -221 450 317 149 43 chr10 14751601 14752324 -130836964 + L2 LINE L2 1685 2484 -830 245 339 18 37 chr10 14752375 14752484 -130836804 + L2 LINE L2 2652 2758 -556 469 310 35 0 chr10 14752714 14752830 -130836458 - L2 LINE L2 -2 3270 3151 1158 219 180 27 chr10 14753054 14753387 -130835901 + MSTD LTR MaLR 1 384 -12 198 103 0 0 chr10 14753388 14753417 -130835871 + (GAA)n Simple_repeat Simple_repeat 2 30 0 285 296 138 26 chr10 14753577 14753766 -130835522 + MLT1K LTR MaLR 335 544 -44 202 344 103 49 chr10 14753832 14754239 -130835049 + L2 LINE L2 2538 2966 -348 269 247 31 117 chr10 14754326 14754488 -130834800 + L2 LINE L2 3122 3269 -44 329 234 0 9 chr10 14754519 14754626 -130834662 + GA-rich Low_complexity Low_complexity 4 109 0 1516 288 68 23 chr10 14755649 14756211 -130833077 + MLT1G LTR MaLR 1 587 -3 221 0 35 0 chr10 14756213 14756242 -130833046 + (TC)n Simple_repeat Simple_repeat 1 30 0 180 0 0 0 chr10 14756241 14756261 -130833027 + (CA)n Simple_repeat Simple_repeat 1 20 0 * 181 348 67 34 chr10 14756606 14757023 -130832265 + L2 LINE L2 2230 2660 -654 456 332 70 41 chr10 14757740 14758083 -130831205 + L2 LINE L2 2960 3312 -1 193 169 34 0 chr10 14758190 14758249 -130831039 + (TA)n Simple_repeat Simple_repeat 2 62 0 541 336 91 48 chr10 14758384 14758641 -130830647 - L2 LINE L2 -447 2867 2623 2475 121 114 8 chr10 14758641 14759028 -130830260 + MSTA LTR MaLR 1 428 0 541 336 91 48 chr10 14759028 14759422 -130829866 - L2 LINE L2 -691 2623 2188 268 320 55 8 chr10 14760154 14760282 -130829006 - MIR SINE MIR -7 255 122 580 256 88 57 chr10 14760773 14761000 -130828288 + MLT1K LTR MaLR 324 557 -31 2106 104 0 17 chr10 14761529 14761838 -130827450 - AluSx SINE Alu 0 304 1 246 343 29 10 chr10 14761838 14761996 -130827292 + MIR SINE MIR 54 216 -46 196 200 0 0 chr10 14762591 14762626 -130826662 + L2 LINE L2 3268 3302 -11 21 57 0 0 chr10 14762892 14762927 -130826361 + AT_rich Low_complexity Low_complexity 1 35 0 223 291 86 26 chr10 14764310 14764461 -130824827 - MIR3 SINE MIR -22 186 27 333 68 0 0 chr10 14765509 14765553 -130823735 + (TG)n Simple_repeat Simple_repeat 1 44 0 267 85 0 51 chr10 14767818 14767877 -130821411 + (TCCC)n Simple_repeat Simple_repeat 2 57 0 1399 201 0 82 chr10 14768412 14768740 -130820548 + AluJo SINE Alu 1 301 -11 194 293 17 0 chr10 14768746 14768804 -130820484 + L2 LINE L2 3254 3312 -1 1765 148 12 70 chr10 14768804 14769134 -130820154 + AluSx SINE Alu 1 311 -1 1919 152 0 13 chr10 14771489 14771791 -130817497 + AluSx SINE Alu 1 298 -14 2755 259 24 53 chr10 14772570 14773502 -130815786 + L1ME1 LINE L1 37 941 -5455 2849 257 62 33 chr10 14773554 14774938 -130814350 + L1ME1 LINE L1 1145 4446 -1769 1446 246 81 21 chr10 14774930 14775409 -130813879 + L1MB8 LINE L1 5662 6169 -9 * 1025 212 62 78 chr10 14775418 14775776 -130813512 + L1ME1 LINE L1 5877 6228 -7 2410 97 7 0 chr10 14775860 14776202 -130813086 - AluSx SINE Alu 0 344 1 2129 73 0 77 chr10 14776584 14776897 -130812391 - AluSg SINE Alu -21 289 1 210 71 0 0 chr10 14777973 14778001 -130811287 + (A)n Simple_repeat Simple_repeat 1 28 0 1951 165 7 0 chr10 14778540 14778837 -130810451 - AluSx SINE Alu -12 300 2 984 281 169 23 chr10 14780219 14780986 -130808302 + L2 LINE L2 2420 3300 -13 26 30 0 0 chr10 14781754 14781787 -130807501 + AT_rich Low_complexity Low_complexity 1 33 0 3049 156 46 13 chr10 14782092 14782636 -130806652 + L1MC3 LINE L1 7223 7784 -1 2560 65 7 0 chr10 14782648 14782957 -130806331 + AluY SINE Alu 1 311 0 2356 108 73 14 chr10 14783907 14784251 -130805037 - THE1B LTR MaLR 0 364 1 1544 183 30 0 chr10 14784431 14784699 -130804589 + AluJo SINE Alu 11 286 -26 361 209 0 36 chr10 14784700 14784810 -130804478 + (CATATA)n Simple_repeat Simple_repeat 2 107 0 1979 152 108 33 chr10 14786732 14787235 -130802053 - MLT2A2 LTR ERVL 0 554 1 1197 168 124 51 chr10 14787508 14787782 -130801506 + MLT2B2 LTR ERVL 1 294 -221 920 253 23 19 chr10 14787784 14788041 -130801247 - LTR9 LTR ERV1 0 612 355 905 112 0 16 chr10 14788253 14788378 -130800910 + FRAM SINE Alu 34 156 -20 2251 84 26 23 chr10 14788800 14789109 -130800179 + AluY SINE Alu 1 310 -1 445 221 103 29 chr10 14791304 14791440 -130797848 + LTR33 LTR ERVL 3 148 -373 574 285 0 0 chr10 14791698 14791828 -130797460 + MER31B-int LTR ERV1 13 142 -4794 * 810 256 28 0 chr10 14791827 14792007 -130797281 + MER31B-int LTR ERV1 4734 4918 -18 1692 193 93 34 chr10 14792013 14792422 -130796866 + MER31B LTR ERV1 5 437 -29 353 203 0 0 chr10 14792444 14792508 -130796780 + LTR33 LTR ERVL 458 521 0 288 235 0 15 chr10 14794163 14794231 -130795057 - MLT1B LTR MaLR 0 390 324 2174 109 0 7 chr10 14794231 14794516 -130794772 + AluSc SINE Alu 1 283 -26 1040 166 0 0 chr10 14794521 14794715 -130794573 + AluSg/x SINE Alu 123 316 0 2207 94 13 13 chr10 14794718 14795017 -130794271 + AluY SINE Alu 1 299 -12 712 226 84 82 chr10 14795017 14795491 -130793797 + L1MC4 LINE L1 7567 8041 -1 216 0 0 0 chr10 14796402 14796426 -130792862 + (A)n Simple_repeat Simple_repeat 1 24 0 1683 146 58 143 chr10 14796774 14797207 -130792081 - MSTD LTR MaLR 0 396 1 1325 184 78 39 chr10 14797740 14798099 -130791189 - Charlie1b DNA MER1_type -100 423 51 263 307 0 0 chr10 14798234 14798309 -130790979 - L2 LINE L2 0 3313 3239 1330 197 119 25 chr10 14798310 14798630 -130790658 + MLT1A1 LTR MaLR 11 360 -5 268 212 45 0 chr10 14798630 14798696 -130790592 - L2 LINE L2 -70 3243 3175 433 243 36 0 chr10 14798761 14798872 -130790416 - MIR SINE MIR -101 161 47 1593 144 0 96 chr10 14799519 14799831 -130789457 - AluJb SINE Alu -30 282 1 269 262 74 0 chr10 14799838 14799960 -130789328 + L2 LINE L2 2202 2332 -982 407 360 80 0 chr10 14800279 14800518 -130788770 + MIR SINE MIR 5 262 0 2244 107 0 7 chr10 14801876 14802186 -130787102 + AluSx SINE Alu 1 308 -4 617 271 43 29 chr10 14802628 14802835 -130786453 + MIR SINE MIR 5 214 -48 235 283 10 50 chr10 14802920 14803019 -130786269 - MIR3 SINE MIR -3 205 111 287 256 70 0 chr10 14803156 14803242 -130786046 + MER91C DNA MER1_type 1 92 -48 537 260 132 56 chr10 14803567 14803975 -130785313 + MLT1H LTR MaLR 108 546 -3 2012 105 4 0 chr10 14804196 14804462 -130784826 - AluSg SINE Alu -18 292 26 266 242 0 0 chr10 14804584 14804650 -130784638 - MIR SINE MIR -163 99 34 2061 133 3 19 chr10 14804833 14805150 -130784138 - AluJb SINE Alu 0 312 1 809 313 4 4 chr10 14805688 14805950 -130783338 - MIR SINE MIR 0 262 1 1183 253 56 11 chr10 14806189 14806607 -130782681 - MLT1J LTR MaLR -6 505 12 869 152 0 0 chr10 14806961 14807099 -130782189 + MSTD LTR MaLR 1 138 -258 214 288 9 72 chr10 14807115 14807226 -130782062 - MIR SINE MIR -9 253 150 828 241 15 20 chr10 14807288 14807487 -130781801 + MSTD LTR MaLR 168 365 0 198 0 0 0 chr10 14807702 14807724 -130781564 + (A)n Simple_repeat Simple_repeat 1 22 0 381 277 83 14 chr10 14807908 14808172 -130781116 - L1MC4a LINE L1 -1913 5895 5581 311 297 140 18 chr10 14809223 14809593 -130779695 + L2 LINE L2 2590 3021 -292 539 286 35 52 chr10 14809825 14810112 -130779176 + L2 LINE L2 3031 3312 -1 1746 148 0 38 chr10 14810642 14810933 -130778355 - AluJb SINE Alu -20 292 13 1842 143 4 7 chr10 14811415 14811695 -130777593 + AluSx SINE Alu 1 279 -33 752 131 0 8 chr10 14811699 14811829 -130777459 + (GGGAA)n Simple_repeat Simple_repeat 2 130 0 4764 75 33 8 chr10 14812391 14813027 -130776261 + LTR8 LTR ERV1 1 652 -39 233 278 157 0 chr10 14813120 14813228 -130776060 + L2 LINE L2 2607 2731 -583 2384 78 3 0 chr10 14813287 14813580 -130775708 + AluSp SINE Alu 5 298 -15 2179 153 44 33 chr10 14813613 14814158 -130775130 + MLT2A2 LTR ERVL 1 554 0 354 248 90 55 chr10 14814528 14814586 -130774702 + L2 LINE L2 3121 3176 -96 3704 144 41 3 chr10 14814586 14815198 -130774090 + MER41B LTR ERV1 1 635 0 354 248 90 55 chr10 14815198 14815284 -130774004 + L2 LINE L2 3176 3270 -2 2948 137 23 19 chr10 14815364 14815847 -130773441 - LTR45B LTR ERV1 -2 487 3 1916 197 53 14 chr10 14816771 14817202 -130772086 + LTR65 LTR ERV1 165 612 -57 2088 112 3 11 chr10 14817203 14817489 -130771799 + AluSx SINE Alu 1 284 -28 251 312 11 0 chr10 14817811 14817904 -130771384 + MIR SINE MIR 169 262 0 1581 248 100 11 chr10 14818087 14818721 -130770567 + L2 LINE L2 2380 3120 -193 312 91 0 0 chr10 14818721 14818765 -130770523 + (CA)n Simple_repeat Simple_repeat 1 44 0 1581 248 100 11 chr10 14818765 14818979 -130770309 + L2 LINE L2 3120 3313 0 698 235 38 6 chr10 14819374 14819557 -130769731 + MER5A DNA MER1_type 1 189 0 1940 162 0 3 chr10 14819638 14819947 -130769341 + AluJo SINE Alu 1 308 -4 2174 135 3 0 chr10 14820570 14820881 -130768407 + AluSx SINE Alu 1 312 0 4452 176 40 12 chr10 14820970 14821851 -130767437 + L1MB3 LINE L1 5278 6180 -3 277 320 75 14 chr10 14821904 14822051 -130767237 + L2 LINE L2 2828 2983 -289 398 207 188 125 chr10 14822081 14822493 -130766795 + MLT1J2 LTR MaLR 1 427 -19 258 328 147 0 chr10 14822650 14822766 -130766522 + L2 LINE L2 3140 3272 0 241 341 91 0 chr10 14823205 14823337 -130765951 + MIR3 SINE MIR 20 163 -45 1460 182 70 3 chr10 14823416 14823718 -130765570 + MER33 DNA MER1_type 1 322 -2 2195 108 0 26 chr10 14824032 14824339 -130764949 + AluSc SINE Alu 1 299 -10 1848 122 0 11 chr10 14824452 14824722 -130764566 - AluSx SINE Alu 0 312 46 4184 84 56 25 chr10 14824722 14825314 -130763974 + LTR66 LTR ERVL 1 610 0 400 40 0 0 chr10 14825314 14825364 -130763924 - AluSx SINE Alu -253 50 1 326 185 15 0 chr10 14825543 14825608 -130763680 + MER5A DNA MER1_type 26 91 -98 9027 110 9 3 chr10 14825797 14827072 -130762216 + HSMAR1 DNA Mariner 1 1283 -4 324 338 62 29 chr10 14827500 14827710 -130761578 + L2 LINE L2 3097 3313 0 2227 108 0 10 chr10 14828625 14828922 -130760366 + AluSx SINE Alu 7 300 -12 1729 78 74 47 chr10 14828975 14829231 -130760057 - AluSc SINE Alu -9 300 38 218 289 132 13 chr10 14830178 14830254 -130759034 + L2 LINE L2 3134 3218 -54 189 0 0 0 chr10 14830840 14830861 -130758427 + (CATATA)n Simple_repeat Simple_repeat 6 26 0 1129 149 56 19 chr10 14831235 14831449 -130757839 + MLT2B1 LTR ERVL 1 222 -298 840 145 0 29 chr10 14831449 14831587 -130757701 - FLAM_C SINE Alu -9 134 1 1225 233 19 22 chr10 14831588 14831859 -130757429 + MLT2B3 LTR ERVL 226 495 -59 546 29 0 0 chr10 14831859 14831927 -130757361 + (TCTA)n Simple_repeat Simple_repeat 2 69 0 1962 159 3 0 chr10 14832085 14832386 -130756902 - AluSx SINE Alu -10 302 1 419 89 0 0 chr10 14832914 14832970 -130756318 + MADE1 DNA Mariner 25 80 0 2023 113 0 17 chr10 14833136 14833429 -130755859 - AluSx SINE Alu -3 309 22 180 0 0 0 chr10 14834367 14834387 -130754901 + (A)n Simple_repeat Simple_repeat 1 20 0 26 0 0 0 chr10 14834619 14834645 -130754643 + AT_rich Low_complexity Low_complexity 1 26 0 186 382 0 0 chr10 14834841 14834909 -130754379 - MIR SINE MIR -106 102 35 2253 135 27 40 chr10 14835002 14835269 -130754019 + L1MA2 LINE L1 5865 6125 -179 2138 113 3 10 chr10 14835269 14835562 -130753726 - AluSc SINE Alu -18 291 1 2253 135 27 40 chr10 14835562 14835738 -130753550 + L1MA2 LINE L1 6125 6302 -2 740 178 108 0 chr10 14836147 14836304 -130752984 + AluJo SINE Alu 14 187 -125 458 222 0 0 chr10 14836320 14836401 -130752887 + FLAM_A SINE Alu 5 85 -57 1787 237 40 9 chr10 14837513 14837961 -130751327 + MLT1C LTR MaLR 6 467 0 228 277 88 19 chr10 14837962 14838121 -130751167 + L2 LINE L2 2221 2390 -924 258 295 72 47 chr10 14838200 14838478 -130750810 + L2 LINE L2 2583 2867 -447 228 146 42 0 chr10 14838608 14838656 -130750632 + L2 LINE L2 3004 3053 -219 22 0 0 0 chr10 14838776 14838798 -130750490 + AT_rich Low_complexity Low_complexity 1 22 0 3137 70 53 0 chr10 14838798 14839213 -130750075 - L1PA8 LINE L1 -13 6159 5723 317 24 24 0 chr10 14839326 14839368 -130749920 + (TGAA)n Simple_repeat Simple_repeat 1 43 0 905 244 166 28 chr10 14839607 14840035 -130749253 + MLT1D LTR MaLR 18 389 -1 597 256 12 0 chr10 14840201 14840365 -130748923 - MIR SINE MIR -16 246 81 514 246 142 24 chr10 14841400 14841611 -130747677 - MIR SINE MIR -12 250 15 835 150 0 0 chr10 14842983 14843103 -130746185 - AluSg/x SINE Alu -26 286 167 332 287 0 66 chr10 14843192 14843328 -130745960 - MIR SINE MIR -110 152 26 2370 109 0 3 chr10 14843469 14843782 -130745506 - AluSx SINE Alu 0 312 1 4105 89 13 2 chr10 14844557 14845105 -130744183 + MER41A LTR ERV1 1 554 0 1757 162 7 36 chr10 14845820 14846123 -130743165 - AluJo SINE Alu -18 294 1 1903 158 0 7 chr10 14846407 14846704 -130742584 + AluSx SINE Alu 9 303 -9 894 140 18 0 chr10 14846707 14846930 -130742358 + GA-rich Low_complexity Low_complexity 1 227 0 777 154 0 0 chr10 14846933 14847063 -130742225 - L1ME LINE L1 -714 5452 5323 349 172 12 68 chr10 14847063 14847226 -130742062 + GA-rich Low_complexity Low_complexity 4 157 0 255 298 53 0 chr10 14847313 14847407 -130741881 + MIR SINE MIR 120 218 -44 1017 154 10 51 chr10 14847629 14847824 -130741464 + AluSx SINE Alu 29 215 -97 17782 58 58 6 chr10 14847954 14850269 -130739019 + L1P LINE L1 3 2437 -3709 243 361 12 0 chr10 14850762 14850845 -130738443 - MIR SINE MIR -105 103 20 767 198 16 105 chr10 14853592 14853840 -130735448 - LTR12 LTR ERV1 -251 463 238 1677 190 19 3 chr10 14854226 14854537 -130734751 - MSTA LTR MaLR -112 316 1 8342 183 57 7 chr10 14854537 14856029 -130733259 - MSTA-int LTR MaLR 0 1651 75 1696 154 54 40 chr10 14856029 14856399 -130732889 + THE1C LTR MaLR 1 375 0 8342 183 57 7 chr10 14856399 14856478 -130732810 - MSTA-int LTR MaLR -1576 75 1 2358 163 17 22 chr10 14856478 14856883 -130732405 - MSTA LTR MaLR 0 428 26 576 360 51 25 chr10 14856893 14857363 -130731925 + ERVL LTR ERVL 2034 2515 -3249 596 167 4 224 chr10 14857400 14857663 -130731625 + L1MA9 LINE L1 5414 5618 -550 4098 152 18 24 chr10 14857763 14858551 -130730737 - L1MA2 LINE L1 -360 5944 5171 1806 168 30 3 chr10 14858551 14858848 -130730440 - AluSx SINE Alu -7 305 1 4098 152 18 24 chr10 14858848 14859300 -130729988 - L1MA2 LINE L1 -1133 5171 4718 3403 121 35 46 chr10 14859300 14859926 -130729362 + L1PB3 LINE L1 5534 6153 -1 773 247 6 11 chr10 14860123 14860327 -130728961 + MLT1F1 LTR MaLR 305 497 -45 1899 213 60 2 chr10 14860702 14861119 -130728169 - MER67C LTR ERV1 -63 647 207 1575 180 37 94 chr10 14861228 14861633 -130727655 + MLT1B LTR MaLR 7 388 -2 21 36 0 0 chr10 14861820 14861848 -130727440 + AT_rich Low_complexity Low_complexity 1 28 0 226 290 65 0 chr10 14862264 14862357 -130726931 + MIR SINE MIR 120 218 -44 2047 98 0 38 chr10 14862579 14862866 -130726422 + AluSx SINE Alu 29 304 -8 2130 168 19 3 chr10 14865444 14865874 -130723414 + L1MA9 LINE L1 5703 6161 -130 208 305 0 49 chr10 14865874 14865904 -130723384 + GA-rich Low_complexity Low_complexity 1 31 -47 1538 122 22 0 chr10 14865904 14866134 -130723154 + L1MA2 LINE L1 6070 6304 0 208 305 0 49 chr10 14866134 14866185 -130723103 + GA-rich Low_complexity Low_complexity 31 78 0 608 110 0 10 chr10 14866185 14866285 -130723003 + (GGGA)n Simple_repeat Simple_repeat 3 101 0 1035 92 0 0 chr10 14866285 14866426 -130722862 + L1MA9 LINE L1 6171 6311 -1 1115 186 39 10 chr10 14866489 14866693 -130722595 - MER6B DNA MER2_type 0 210 1 2223 106 0 37 chr10 14867158 14867479 -130721809 - AluSc SINE Alu 0 309 1 4236 97 13 2 chr10 14867648 14868195 -130721093 + MER41A LTR ERV1 2 554 0 4985 135 35 5 chr10 14868950 14869704 -130719584 - MER4E LTR ERV1 -3 776 1 4052 98 29 29 chr10 14870261 14870815 -130718473 + MER41A LTR ERV1 1 554 0 31 0 0 0 chr10 14871135 14871166 -130718122 + AT_rich Low_complexity Low_complexity 1 31 0 2609 37 7 0 chr10 14871481 14871778 -130717510 + L1PA3 LINE L1 5854 6152 -3 33 25 0 0 chr10 14871778 14871818 -130717470 + AT_rich Low_complexity Low_complexity 1 40 0 2857 212 30 58 chr10 14872315 14873177 -130716111 + L1MC4 LINE L1 7202 8039 -3 1773 288 36 23 chr10 14873885 14874288 -130715000 + L2 LINE L2 2312 2734 -579 2418 161 0 20 chr10 14874288 14874686 -130714602 - MLT1B LTR MaLR 0 390 1 1773 288 36 23 chr10 14874686 14875035 -130714253 + L2 LINE L2 2734 3077 -236 1614 171 84 10 chr10 14875050 14875359 -130713929 + MER61A LTR ERV1 1 332 -11 563 286 27 45 chr10 14875372 14875596 -130713692 + L2 LINE L2 3094 3313 0 21 0 0 0 chr10 14875849 14875870 -130713418 + AT_rich Low_complexity Low_complexity 1 21 0 2392 79 3 0 chr10 14875877 14876169 -130713119 + AluSp SINE Alu 3 295 -18 395 212 74 74 chr10 14876184 14876373 -130712915 - HAL1 LINE L1 0 2507 2319 391 228 26 61 chr10 14876386 14876500 -130712788 - MER104 DNA Tc2 -70 110 1 235 210 111 49 chr10 14877340 14877421 -130711867 - MLT1I LTR MaLR 0 409 324 302 195 85 14 chr10 14877568 14877665 -130711623 - MLT1J2 LTR MaLR -285 161 46 2623 40 0 3 chr10 14877687 14877990 -130711298 + AluY SINE Alu 1 302 -9 228 320 53 0 chr10 14878096 14878171 -130711117 + L2 LINE L2 3235 3313 0 408 324 7 14 chr10 14878174 14878313 -130710975 - MLT1L LTR MaLR -458 157 20 192 77 0 0 chr10 14878358 14878384 -130710904 + (TGGA)n Simple_repeat Simple_repeat 2 27 0 240 334 71 53 chr10 14878419 14878742 -130710546 + L2 LINE L2 2557 2885 -429 181 345 23 35 chr10 14878818 14878905 -130710383 + L2 LINE L2 3017 3102 -170 4117 109 11 0 chr10 14879037 14879585 -130709703 + MER41A LTR ERV1 1 554 0 210 191 24 0 chr10 14879663 14879705 -130709583 - L2 LINE L2 -5 3308 3266 263 239 9 101 chr10 14881652 14881761 -130707527 + L2 LINE L2 3215 3313 0 225 147 221 59 chr10 14881910 14881938 -130707350 + L1ME3 LINE L1 6054 6076 -86 279 71 0 0 chr10 14881938 14881980 -130707308 + (CA)n Simple_repeat Simple_repeat 2 43 0 225 147 221 59 chr10 14881980 14882019 -130707269 + L1ME3 LINE L1 6076 6132 -30 3008 176 51 7 chr10 14882774 14883347 -130705941 + L1MA4 LINE L1 5700 6297 -3 357 171 53 26 chr10 14884415 14884491 -130704797 - L1MA6 LINE L1 -7 6293 6216 602 236 44 35 chr10 14885034 14885244 -130704044 - MER20B DNA MER1_type -1 218 3 2676 146 53 5 chr10 14885636 14886048 -130703240 + MSTB1 LTR MaLR 1 432 0 551 314 36 32 chr10 14886235 14886483 -130702805 + L2 LINE L2 2930 3178 -135 531 217 47 16 chr10 14887108 14887237 -130702051 - L2 LINE L2 -6 3307 3175 2214 109 6 16 chr10 14887324 14887637 -130701651 + AluSx SINE Alu 1 310 -2 570 188 10 0 chr10 14889052 14889153 -130700135 - MER45A DNA AcHobo 0 178 77 1808 162 30 3 chr10 14889230 14889570 -130699718 - AluSx SINE Alu 0 348 1 370 98 0 0 chr10 14889946 14889997 -130699291 - MADE1 DNA Mariner 0 80 30 735 178 0 86 chr10 14890001 14890153 -130699135 + FRAM SINE Alu 20 158 -18 2069 119 0 53 chr10 14890242 14890560 -130698728 - AluSx SINE Alu -9 303 3 663 107 0 0 chr10 14891974 14892058 -130697230 + AluS SINE Alu 1 84 -229 434 91 197 0 chr10 14892667 14892733 -130696555 - MADE1 DNA Mariner -1 79 1 926 94 31 0 chr10 14892770 14892898 -130696390 + L1PA5 LINE L1 6017 6148 -6 264 59 0 0 chr10 14892995 14893029 -130696259 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 182 371 51 17 chr10 14893029 14893207 -130696081 - L2 LINE L2 -12 3301 3118 1848 127 0 80 chr10 14893344 14893682 -130695606 + AluSx SINE Alu 2 312 0 2970 234 170 25 chr10 14893694 14893840 -130695448 + L1ME LINE L1 3562 3686 -2460 1525 208 154 40 chr10 14893840 14894293 -130694995 + MLT1D LTR MaLR 1 505 0 2970 234 170 25 chr10 14894293 14895407 -130693881 + L1ME LINE L1 3686 5004 -1142 218 111 37 56 chr10 14895407 14895515 -130693773 + (TA)n Simple_repeat Simple_repeat 1 106 0 253 97 43 65 chr10 14895530 14895623 -130693665 + (TA)n Simple_repeat Simple_repeat 2 92 0 861 137 0 0 chr10 14895724 14895848 -130693440 + AluJb SINE Alu 1 124 -188 1025 195 0 0 chr10 14895921 14896090 -130693198 + AluJb SINE Alu 129 297 -15 805 255 69 31 chr10 14896091 14896509 -130692779 + L1ME LINE L1 5200 5637 -525 488 223 137 29 chr10 14896509 14896684 -130692604 - L1M4 LINE L1 -1876 4270 4077 673 283 123 35 chr10 14897088 14897853 -130691435 + L1ME LINE L1 4888 5729 -433 2167 102 0 14 chr10 14897969 14898294 -130690994 - AluSc SINE Alu 0 309 1 26 30 0 0 chr10 14898613 14898646 -130690642 + AT_rich Low_complexity Low_complexity 1 33 0 291 278 0 22 chr10 14900568 14900702 -130688586 + G-rich Low_complexity Low_complexity 1 131 0 496 328 6 6 chr10 14900932 14901112 -130688176 + (CA)n Simple_repeat Simple_repeat 1 180 0 301 308 8 23 chr10 14901082 14901212 -130688076 + (CATA)n Simple_repeat Simple_repeat 1 128 0 * 247 299 10 0 chr10 14901218 14901467 -130687821 + (CA)n Simple_repeat Simple_repeat 1 251 0 330 274 19 0 chr10 14901613 14901770 -130687518 + (CA)n Simple_repeat Simple_repeat 1 160 0 338 237 0 9 chr10 14901797 14901911 -130687377 + (CA)n Simple_repeat Simple_repeat 1 113 0 382 233 0 0 chr10 14902339 14902412 -130686876 + MER82 DNA MER2_type 14 86 -567 267 190 116 66 chr10 14902455 14902576 -130686712 - MIR3 SINE MIR -78 130 4 1063 110 12 13 chr10 14902914 14903096 -130686192 + L1P4 LINE L1 5346 5518 -646 * 2005 181 3 18 chr10 14903088 14903458 -130685830 + L1MA2 LINE L1 4885 5250 -896 2735 100 0 14 chr10 14903458 14903818 -130685470 + THE1A LTR MaLR 1 355 0 2005 181 3 18 chr10 14903818 14903839 -130685449 + L1MA2 LINE L1 5250 5270 -876 4885 107 14 17 chr10 14903975 14904698 -130684590 + L1MA2 LINE L1 5583 6303 -1 3463 50 29 7 chr10 14904714 14905135 -130684153 + L1PA8 LINE L1 5743 6172 0 214 333 0 0 chr10 14905544 14905601 -130683687 + L2 LINE L2 3254 3310 -3 234 175 35 0 chr10 14906767 14906824 -130682464 + L2 LINE L2 2561 2619 -695 731 197 34 48 chr10 14906862 14907070 -130682218 - MER96B DNA MER1_type? -21 396 192 2157 130 3 0 chr10 14907100 14907408 -130681880 - AluSx SINE Alu -3 309 1 667 199 28 39 chr10 14907867 14908048 -130681240 + MER96B DNA MER1_type? 192 370 -47 502 217 130 25 chr10 14907915 14908076 -130681212 - MER96B DNA MER1_type? -238 179 2 * 318 340 94 20 chr10 14908090 14908293 -130680995 + L2 LINE L2 2667 2884 -430 1834 258 4 37 chr10 14908441 14908903 -130680385 + LTR2 LTR ERV1 3 449 0 1608 196 48 18 chr10 14908906 14909243 -130680045 + MLT2C1 LTR ERVL 3 349 -48 387 60 0 0 chr10 14909308 14909358 -130679930 - MADE1 DNA Mariner -30 50 1 453 208 9 19 chr10 14909433 14909539 -130679749 + L2 LINE L2 3137 3241 -31 766 296 142 13 chr10 14909795 14910003 -130679285 + L2 LINE L2 2611 2791 -522 2387 122 30 25 chr10 14910003 14910364 -130678924 + THE1B LTR MaLR 1 363 -1 766 296 142 13 chr10 14910364 14910792 -130678496 + L2 LINE L2 2791 3312 -1 1795 169 3 17 chr10 14911314 14911609 -130677679 - AluJo SINE Alu -21 291 1 2128 135 3 0 chr10 14912220 14912524 -130676764 + AluSq SINE Alu 1 305 -8 206 345 53 0 chr10 14912669 14912782 -130676506 - L2 LINE L2 -1401 1913 1795 840 243 44 44 chr10 14913391 14913768 -130675520 + L1MEd LINE L1 2393 2759 -4806 442 282 30 79 chr10 14913926 14913966 -130675322 + MIR SINE MIR 2 42 -220 2674 118 14 16 chr10 14913966 14914331 -130674957 - THE1B LTR MaLR 0 364 1 442 282 30 79 chr10 14914331 14914533 -130674755 + MIR SINE MIR 42 232 -30 3070 113 19 9 chr10 14914533 14914957 -130674331 - MSTA LTR MaLR 0 428 1 442 282 30 79 chr10 14914957 14914979 -130674309 + MIR SINE MIR 232 254 -8 1973 116 0 8 chr10 14915516 14915783 -130673505 - AluSp SINE Alu -14 299 35 2256 102 0 7 chr10 14915899 14916192 -130673096 - AluSc SINE Alu -18 291 1 367 224 87 40 chr10 14916398 14916543 -130672745 + L1MEd LINE L1 2878 2999 -4566 1757 167 25 3 chr10 14916597 14916879 -130672409 - AluJb SINE Alu -22 290 3 455 235 159 72 chr10 14917187 14917361 -130671927 + L1ME4a LINE L1 5635 5792 -329 1966 126 19 50 chr10 14917361 14917679 -130671609 + AluSx SINE Alu 1 308 -4 455 235 159 72 chr10 14917679 14917951 -130671337 + L1ME4a LINE L1 5792 6120 -1 2174 93 4 0 chr10 14919384 14919662 -130669626 + AluSq SINE Alu 31 309 -4 200 271 0 0 chr10 14919705 14919753 -130669535 + (CA)n Simple_repeat Simple_repeat 1 48 0 272 286 71 50 chr10 14921658 14921700 -130667588 - MIR SINE MIR -118 144 104 1888 210 39 80 chr10 14921700 14922338 -130666950 + LTR9 LTR ERV1 1 612 0 272 286 71 50 chr10 14922338 14922435 -130666853 - MIR SINE MIR -158 104 2 1897 258 32 28 chr10 14922649 14923251 -130666037 + L1MD3 LINE L1 7380 7983 -12 2180 115 3 3 chr10 14923255 14923560 -130665728 - AluSg SINE Alu -5 305 1 1732 157 16 63 chr10 14923676 14924040 -130665248 + MER7A DNA MER2_type 1 345 -1 360 0 0 0 chr10 14924343 14924383 -130664905 + (CA)n Simple_repeat Simple_repeat 2 41 0 433 171 12 0 chr10 14925330 14925412 -130663876 - L1MB3 LINE L1 -7 6176 6094 273 204 204 38 chr10 14925416 14925512 -130663776 - MER5C DNA MER1_type -68 256 177 1956 137 0 11 chr10 14925512 14925817 -130663471 + AluSx SINE Alu 1 302 0 273 204 204 38 chr10 14925817 14925905 -130663383 - MER5C DNA MER1_type -147 177 40 432 226 120 69 chr10 14926195 14926317 -130662971 + MLT1F LTR MaLR 1 115 -440 2335 112 0 0 chr10 14926317 14926622 -130662666 + AluSx SINE Alu 1 305 -7 432 226 120 69 chr10 14926622 14926749 -130662539 + MLT1F LTR MaLR 115 262 -293 203 250 0 0 chr10 14926768 14926820 -130662468 + GA-rich Low_complexity Low_complexity 2 53 0 395 257 28 18 chr10 14926830 14926939 -130662349 + MLT1F LTR MaLR 393 502 -88 2028 164 33 39 chr10 14926945 14927276 -130662012 + MLT1B LTR MaLR 3 333 -57 3692 120 0 15 chr10 14927276 14927808 -130661480 + MER1A DNA MER1_type 1 524 -3 2028 164 33 39 chr10 14927808 14927866 -130661422 + MLT1B LTR MaLR 333 390 0 390 127 0 76 chr10 14927868 14927947 -130661341 + MLT1G1 LTR MaLR 494 588 -1 1161 172 39 10 chr10 14929170 14929374 -130659914 + AluJb SINE Alu 1 210 -102 201 176 0 0 chr10 14929396 14929430 -130659858 + A-rich Low_complexity Low_complexity 1 34 0 370 309 164 30 chr10 14929677 14929981 -130659307 + MER115 DNA AcHobo 3 347 -346 924 132 23 40 chr10 14931098 14931272 -130658016 + FRAM SINE Alu 6 176 0 1277 142 19 69 chr10 14931324 14931551 -130657737 - THE1C LTR MaLR 0 375 161 2048 123 7 29 chr10 14931551 14931859 -130657429 + AluSx SINE Alu 1 301 -11 1277 142 19 69 chr10 14931859 14931892 -130657396 - THE1C LTR MaLR -214 161 128 274 330 215 0 chr10 14932335 14932544 -130656744 - MIR SINE MIR -3 259 6 2200 111 16 7 chr10 14934083 14934264 -130655024 - AluSx SINE Alu 0 312 125 2148 113 3 25 chr10 14934264 14934583 -130654705 - AluSx SINE Alu 0 312 1 2200 111 16 7 chr10 14934583 14934707 -130654581 - AluSx SINE Alu -187 125 4 1507 143 52 45 chr10 14934954 14935241 -130654047 - AluJo SINE Alu -23 289 1 923 247 92 32 chr10 14935242 14935622 -130653666 - L2 LINE L2 -7 3306 2904 255 264 100 45 chr10 14935622 14935732 -130653556 - MARNA DNA Mariner -26 560 445 2284 182 6 34 chr10 14936287 14936759 -130652529 + MER65C LTR ERV1 2 460 -1 5453 146 21 12 chr10 14937452 14938369 -130650919 - L1MC1 LINE L1 -6 6327 5403 254 268 165 0 chr10 14938499 14938596 -130650692 - L2 LINE L2 0 3272 3160 291 371 86 0 chr10 14938688 14938885 -130650403 + L2 LINE L2 2943 3156 -157 2020 184 93 18 chr10 14938983 14939435 -130649853 - MER66B LTR ERV1 0 486 1 1689 255 88 21 chr10 14939435 14939983 -130649305 - HsTC2 DNA Tc2 -1310 588 1 269 246 44 79 chr10 14939995 14940109 -130649179 + L2 LINE L2 3171 3280 -33 274 214 67 22 chr10 14940117 14940206 -130649082 + HsTC2 DNA Tc2 360 452 -1446 * 3382 139 6 19 chr10 14940190 14940561 -130648727 + MER49 LTR ERV1 26 389 -534 2347 85 0 0 chr10 14940561 14940856 -130648432 + AluSq SINE Alu 1 295 -18 3382 139 6 19 chr10 14940856 14941016 -130648272 + MER49 LTR ERV1 389 550 -373 309 151 0 0 chr10 14941034 14941087 -130648201 + GA-rich Low_complexity Low_complexity 4 56 0 1249 180 69 114 chr10 14941138 14941523 -130647765 + MER49 LTR ERV1 334 923 0 640 157 26 13 chr10 14941905 14942058 -130647230 + GA-rich Low_complexity Low_complexity 3 157 0 218 237 32 75 chr10 14942930 14943023 -130646265 - L2 LINE L2 -6 3266 3178 316 179 18 0 chr10 14944050 14944106 -130645182 + MLT1E2 LTR MaLR 219 275 -351 428 123 14 0 chr10 14944137 14944210 -130645078 + (CA)n Simple_repeat Simple_repeat 1 74 0 1206 211 68 4 chr10 14944216 14944327 -130644961 + MLT1E2 LTR MaLR 344 446 -180 183 42 0 0 chr10 14944327 14944351 -130644937 + (CAGCC)n Simple_repeat Simple_repeat 1 24 0 1206 211 68 4 chr10 14944351 14944505 -130644783 + MLT1E2 LTR MaLR 446 626 0 2332 115 0 0 chr10 14944510 14944822 -130644466 + AluSx SINE Alu 1 312 0 782 285 35 22 chr10 14944842 14945211 -130644077 - L1ME LINE L1 -528 5636 5263 789 295 128 19 chr10 14945219 14945717 -130643571 - L1ME LINE L1 -1001 5145 4570 378 42 0 0 chr10 14945717 14945765 -130643523 + (CA)n Simple_repeat Simple_repeat 2 49 0 789 295 128 19 chr10 14945765 14945860 -130643428 - L1ME LINE L1 -1576 4570 4487 27 0 0 0 chr10 14946059 14946086 -130643202 + AT_rich Low_complexity Low_complexity 1 27 0 1166 231 33 18 chr10 14946086 14946419 -130642869 - L1MA9 LINE L1 -38 6274 5937 319 75 57 0 chr10 14946448 14946501 -130642787 - L1MC2 LINE L1 0 6344 6289 1628 271 54 57 chr10 14946518 14946776 -130642512 - L1ME LINE L1 -1776 4370 4113 1732 165 33 3 chr10 14946776 14947079 -130642209 + AluJb SINE Alu 1 312 0 1628 271 54 57 chr10 14947079 14947729 -130641559 - L1ME LINE L1 -2033 4113 3465 233 234 0 0 chr10 14948293 14948340 -130640948 - L3 LINE CR1 -4 1573 1527 4489 78 19 0 chr10 14948613 14949196 -130640092 + L1PA10 LINE L1 5556 6152 -16 188 57 0 57 chr10 14949196 14949231 -130640057 + (TTAAA)n Simple_repeat Simple_repeat 3 35 0 196 236 28 28 chr10 14949742 14949814 -130639474 + MIR3 SINE MIR 2 73 -135 846 50 0 0 chr10 14949814 14949915 -130639373 - AluY SINE Alu -7 304 204 441 262 89 48 chr10 14949915 14950083 -130639205 + MIR SINE MIR 67 241 -21 208 239 0 0 chr10 14950341 14950387 -130638901 + (TG)n Simple_repeat Simple_repeat 1 46 0 228 132 57 94 chr10 14950778 14950831 -130638457 - AluJo SINE Alu -166 136 86 1292 157 0 68 chr10 14950831 14951067 -130638221 - AluJo SINE Alu -92 220 1 267 67 0 67 chr10 14951614 14951659 -130637629 - L2 LINE L2 -6 3307 3266 2386 72 0 26 chr10 14951944 14952248 -130637040 + AluSq SINE Alu 1 296 -17 498 291 58 54 chr10 14952482 14952530 -130636758 - MIR SINE MIR -1 261 215 1865 137 3 14 chr10 14952530 14952814 -130636474 - AluJb SINE Alu -20 292 12 498 291 58 54 chr10 14952814 14952879 -130636409 - MIR SINE MIR -47 215 152 2048 157 0 0 chr10 14952879 14953184 -130636104 - AluSx SINE Alu -7 305 1 498 291 58 54 chr10 14953184 14953310 -130635978 - MIR SINE MIR -110 152 20 21 0 0 0 chr10 14955053 14955074 -130634214 + AT_rich Low_complexity Low_complexity 1 21 0 5429 152 38 95 chr10 14955687 14956331 -130632957 - L1 LINE L1 -1535 4611 3932 282 216 20 0 chr10 14956331 14956382 -130632906 - MER66A LTR ERV1 -140 338 287 5429 152 38 95 chr10 14956382 14956829 -130632459 - L1 LINE L1 -2214 3932 3552 1211 159 195 16 chr10 14956829 14957080 -130632208 - AluJo SINE Alu -16 296 1 5429 152 38 95 chr10 14957080 14957250 -130632038 - L1 LINE L1 -2594 3552 3374 346 336 0 9 chr10 14957546 14957653 -130631635 + MIR SINE MIR 1 106 -156 * 384 302 79 0 chr10 14957648 14957787 -130631501 - L2 LINE L2 0 3313 3164 603 323 142 6 chr10 14957973 14958459 -130630829 - L2 LINE L2 -412 2902 2351 1411 193 39 8 chr10 14958460 14958719 -130630569 + Tigger7 DNA MER2_type 1 267 -2220 574 182 10 0 chr10 14958716 14958815 -130630473 + Tigger7 DNA MER2_type 2388 2487 0 * 362 341 0 0 chr10 14958815 14958953 -130630335 + MIR SINE MIR 101 238 -24 272 319 22 11 chr10 14959089 14959180 -130630108 + L2 LINE L2 3134 3225 -47 2281 103 0 7 chr10 14960203 14960505 -130628783 - AluSx SINE Alu -12 300 1 1753 147 35 0 chr10 14961536 14961821 -130627467 + AluJb SINE Alu 1 295 -17 264 250 47 61 chr10 14961878 14962026 -130627262 - L1ME4a LINE L1 -96 6025 5880 245 202 34 67 chr10 14962214 14962303 -130626985 - L1MA5 LINE L1 0 6300 6215 315 241 83 88 chr10 14962314 14962433 -130626855 - L1ME4a LINE L1 -303 5818 5699 628 163 0 131 chr10 14962433 14962586 -130626702 - FLAM_A SINE Alu 0 133 1 315 241 83 88 chr10 14962586 14962694 -130626594 - L1ME4a LINE L1 -422 5699 5592 2000 230 27 19 chr10 14962698 14963374 -130625914 - L1MB7 LINE L1 -321 5863 5307 407 368 76 21 chr10 14963468 14963889 -130625399 - L1MB7 LINE L1 -978 5168 4725 237 176 122 137 chr10 14964044 14964175 -130625113 + L1MC4 LINE L1 6700 6828 -1214 189 0 0 0 chr10 14964203 14964224 -130625064 + (A)n Simple_repeat Simple_repeat 1 21 0 1876 145 0 39 chr10 14964650 14964961 -130624327 + AluJb SINE Alu 1 299 -13 4185 27 0 0 chr10 14965564 14966051 -130623237 - L1PA3 LINE L1 -2066 4080 3594 11108 30 0 2 chr10 14966046 14968120 -130621168 + L1PA3 LINE L1 4086 6152 -3 1706 165 29 0 chr10 14968188 14968467 -130620821 + AluJo SINE Alu 1 287 -25 628 262 147 39 chr10 14968778 14968914 -130620374 + L1MC4 LINE L1 6459 6579 -1463 2347 105 0 7 chr10 14968914 14969218 -130620070 - AluSx SINE Alu -10 302 1 628 262 147 39 chr10 14969218 14969360 -130619928 + L1MC4 LINE L1 6579 6767 -1275 387 0 0 0 chr10 14969711 14969754 -130619534 + (CA)n Simple_repeat Simple_repeat 2 44 0 258 32 0 0 chr10 14969753 14969784 -130619504 + (GA)n Simple_repeat Simple_repeat 2 32 0 * 308 358 80 6 chr10 14969817 14969993 -130619295 - MARNA DNA Mariner -91 495 307 221 283 0 0 chr10 14974229 14974289 -130614999 - L2 LINE L2 0 3272 3213 2423 80 0 7 chr10 14974417 14974716 -130614572 - AluSg SINE Alu -13 297 1 1051 146 12 0 chr10 14975870 14976034 -130613254 - AluJb SINE Alu -11 301 136 2175 120 0 3 chr10 14976037 14976345 -130612943 - AluSq SINE Alu -6 307 1 634 272 50 29 chr10 14977664 14977903 -130611385 - L1ME LINE L1 -355 5766 5523 2186 94 0 23 chr10 14978179 14978478 -130610810 - AluSx SINE Alu -20 292 1 2527 68 0 0 chr10 14978843 14979139 -130610149 - AluY SINE Alu -15 296 1 250 318 65 56 chr10 14980120 14980177 -130609111 - MIR SINE MIR -19 243 188 2310 114 0 0 chr10 14980177 14980484 -130608804 - AluSx SINE Alu -5 307 1 250 318 65 56 chr10 14980484 14980640 -130608648 - MIR SINE MIR -74 188 28 290 200 17 23 chr10 14980953 14981043 -130608245 - MIR3 SINE MIR -24 184 96 305 321 83 24 chr10 14982973 14983225 -130606063 + LTR34 LTR ERV1 269 535 -164 1777 150 9 38 chr10 14983240 14983560 -130605728 + AluJo SINE Alu 1 311 -1 1954 137 30 3 chr10 14983562 14983861 -130605427 + AluSx SINE Alu 1 307 -5 235 135 0 96 chr10 14983926 14983978 -130605310 + LTR23 LTR ERV1 342 388 -49 244 270 22 45 chr10 14984220 14984309 -130604979 + L2 LINE L2 3005 3091 -222 949 299 169 8 chr10 14984901 14985492 -130603796 - L2 LINE L2 -341 2973 2288 199 303 45 0 chr10 14987242 14987308 -130601980 + MIR SINE MIR 76 144 -64 292 296 117 52 chr10 14989393 14989560 -130599728 + MIR SINE MIR 18 205 -57 2359 81 10 3 chr10 14989560 14989856 -130599432 + AluSc SINE Alu 2 299 -10 292 296 117 52 chr10 14989856 14989918 -130599370 + MIR SINE MIR 205 262 0 1589 235 46 28 chr10 14990250 14990709 -130598579 + L1ME3A LINE L1 5678 6144 -26 263 332 63 38 chr10 14990813 14991051 -130598237 + MIR SINE MIR 5 248 -14 216 279 77 19 chr10 14992823 14992927 -130596361 - L2 LINE L2 -19 3294 3185 1877 120 13 57 chr10 14993976 14994292 -130594996 + AluSx SINE Alu 1 302 -10 21 0 0 0 chr10 14995691 14995712 -130593576 + AT_rich Low_complexity Low_complexity 1 21 0 678 241 101 51 chr10 14996543 14996830 -130592458 + L1M4 LINE L1 5521 5822 -356 392 266 108 0 chr10 14996942 14997081 -130592207 + MER5A DNA MER1_type 3 156 -33 505 222 90 36 chr10 14997081 14997248 -130592040 - MIR SINE MIR -82 180 5 402 197 9 125 chr10 14998113 14998287 -130591001 - MIR3 SINE MIR -17 191 34 771 281 79 34 chr10 14998886 14999239 -130590049 + MER90 LTR ERV1 246 614 0 202 175 50 0 chr10 14999316 14999356 -130589932 + MIR SINE MIR 103 144 -64 947 166 186 0 chr10 14999481 14999680 -130589608 - MER46A DNA MER2_type 0 236 1 276 152 45 15 chr10 15000652 15000718 -130588570 - MLT1L LTR MaLR -350 265 198 222 118 0 0 chr10 15000816 15000850 -130588438 + (CA)n Simple_repeat Simple_repeat 2 35 0 1663 126 66 102 chr10 15000851 15001232 -130588056 + MLT1A2 LTR MaLR 8 374 0 216 0 0 0 chr10 15003181 15003205 -130586083 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1822 83 13 0 chr10 15003217 15003447 -130585841 - AluSq SINE Alu -80 233 1 424 249 46 83 chr10 15004439 15004557 -130584731 + MER112 DNA MER1_type 51 159 -101 1734 141 61 7 chr10 15004557 15004834 -130584454 + AluSx SINE Alu 1 292 -20 424 249 46 83 chr10 15004834 15004932 -130584356 + MER112 DNA MER1_type 159 259 -1 269 220 30 100 chr10 15005853 15005953 -130583335 - MIR SINE MIR -139 123 31 288 0 0 0 chr10 15007897 15007929 -130581359 + (CA)n Simple_repeat Simple_repeat 2 33 0 260 256 52 59 chr10 15008839 15009039 -130580249 + L2 LINE L2 2776 2973 -299 467 286 82 15 chr10 15009649 15009855 -130579433 - MIR SINE MIR -10 252 33 339 272 0 0 chr10 15010191 15010316 -130578972 + (CA)n Simple_repeat Simple_repeat 1 125 0 243 208 0 19 chr10 15011054 15011107 -130578181 - MER5B DNA MER1_type -2 176 125 2161 61 41 41 chr10 15011575 15011870 -130577418 - AluY SINE Alu -16 295 1 688 274 117 6 chr10 15013149 15013499 -130575789 - L2 LINE L2 -3 3310 2922 2264 112 0 3 chr10 15013783 15014087 -130575201 - AluSx SINE Alu -9 303 1 332 228 158 0 chr10 15015281 15015408 -130573880 - L1ME4a LINE L1 0 6121 5975 244 216 167 29 chr10 15015470 15015572 -130573716 - L1ME4a LINE L1 -251 5870 5755 2217 159 39 127 chr10 15015576 15016223 -130573065 + Charlie1 DNA MER1_type 2168 2757 -4 30 27 0 0 chr10 15016534 15016571 -130572717 + AT_rich Low_complexity Low_complexity 1 37 0 880 131 0 0 chr10 15016969 15017091 -130572197 + FLAM_A SINE Alu 1 122 -11 293 185 104 111 chr10 15017133 15017268 -130572020 - L2 LINE L2 0 3313 3180 850 182 79 0 chr10 15018015 15018180 -130571108 + MER45A DNA AcHobo 1 178 0 440 83 17 0 chr10 15018320 15018380 -130570908 + MLT1E LTR MaLR 92 152 -441 1045 251 18 11 chr10 15018436 15018715 -130570573 + MLT1E LTR MaLR 313 593 0 2313 70 0 7 chr10 15018900 15019218 -130570070 + AluY SINE Alu 1 316 0 194 289 105 67 chr10 15019393 15019632 -130569656 - L2 LINE L2 -1926 1388 1141 324 163 0 0 chr10 15019895 15019944 -130569344 - MER81 DNA DNA -36 78 30 183 197 49 16 chr10 15020010 15020071 -130569217 - MER5B DNA MER1_type -3 175 113 220 309 124 14 chr10 15020078 15020360 -130568928 - L2 LINE L2 -2666 648 336 214 262 0 0 chr10 15021424 15021466 -130567822 + (CATG)n Simple_repeat Simple_repeat 3 44 0 336 24 0 0 chr10 15022260 15022301 -130566987 + (TG)n Simple_repeat Simple_repeat 1 41 0 2249 119 0 0 chr10 15022550 15022845 -130566443 + AluSx SINE Alu 1 295 -17 1400 172 92 43 chr10 15022989 15023337 -130565951 - MLT1A1 LTR MaLR 0 365 1 916 165 95 0 chr10 15024610 15024768 -130564520 + FAM SINE Alu 3 175 0 246 171 26 13 chr10 15024770 15024846 -130564442 + (TA)n Simple_repeat Simple_repeat 1 77 0 233 200 27 67 chr10 15024871 15024946 -130564342 + MIR SINE MIR 42 113 -95 1519 128 210 55 chr10 15025212 15025475 -130563813 + MSTD LTR MaLR 1 331 -65 1682 137 40 57 chr10 15025475 15025775 -130563513 + AluSq SINE Alu 1 295 -18 1519 128 210 55 chr10 15025775 15025854 -130563434 + MSTD LTR MaLR 331 396 0 2229 121 3 0 chr10 15027228 15027533 -130561755 - AluSx SINE Alu -6 306 1 233 271 135 0 chr10 15027687 15027783 -130561505 + MER112 DNA MER1_type 6 114 -146 1829 157 32 23 chr10 15027871 15028216 -130561072 + L1MB3 LINE L1 5748 6095 -88 2005 125 0 0 chr10 15028277 15028583 -130560705 + AluSg SINE Alu 1 306 0 1902 140 21 0 chr10 15031786 15032065 -130557223 + AluSx SINE Alu 13 297 -15 2290 96 0 3 chr10 15032108 15032400 -130556888 + AluY SINE Alu 1 291 -20 209 261 8 67 chr10 15033305 15033424 -130555864 - L2 LINE L2 -329 2943 2832 1662 193 0 22 chr10 15033649 15033965 -130555323 + AluJo SINE Alu 1 309 -3 2478 83 0 3 chr10 15034395 15034707 -130554581 - AluY SINE Alu 0 311 1 240 271 271 8 chr10 15034783 15034835 -130554453 - MIR SINE MIR -87 175 138 2249 122 0 3 chr10 15034835 15035147 -130554141 + AluSx SINE Alu 2 312 0 240 271 271 8 chr10 15035147 15035212 -130554076 - MIR SINE MIR -124 138 27 4577 94 8 17 chr10 15036680 15037320 -130551968 + MER51A LTR ERV1 1 634 0 231 319 118 0 chr10 15037860 15037979 -130551309 + MER94 DNA DNA 1 133 -1 1700 173 33 36 chr10 15038428 15038793 -130550495 + MLT1A1 LTR MaLR 2 365 0 268 295 129 0 chr10 15039818 15039957 -130549331 + MIR3 SINE MIR 42 198 -10 2154 120 27 0 chr10 15040930 15041231 -130548057 + AluSx SINE Alu 1 309 -3 1207 107 0 11 chr10 15041676 15041854 -130547434 + L1PA8 LINE L1 5989 6164 -8 408 267 30 15 chr10 15041909 15042040 -130547248 + MIR SINE MIR 81 213 -49 389 306 50 0 chr10 15042083 15042204 -130547084 + MIR3 SINE MIR 41 167 -41 2259 106 0 22 chr10 15042730 15043042 -130546246 + AluSp SINE Alu 1 305 -8 274 258 22 0 chr10 15043580 15043675 -130545613 + L1MC4 LINE L1 7074 7255 -633 529 235 84 67 chr10 15043796 15044081 -130545207 + L1MC5 LINE L1 7287 7576 -385 36 23 0 0 chr10 15045159 15045202 -130544086 + AT_rich Low_complexity Low_complexity 1 43 0 1815 111 67 54 chr10 15045445 15045743 -130543545 + AluSq SINE Alu 1 302 -11 1593 157 60 17 chr10 15046263 15046562 -130542726 + AluJo SINE Alu 1 312 0 200 292 0 0 chr10 15046831 15046879 -130542409 + MIR SINE MIR 215 262 0 513 269 195 21 chr10 15046994 15047276 -130542012 + L1MB7 LINE L1 5843 6173 -11 334 287 52 52 chr10 15047376 15047453 -130541835 + MIR SINE MIR 13 89 -173 1609 103 5 0 chr10 15047453 15047667 -130541621 - AluSg/x SINE Alu -9 303 89 334 287 52 52 chr10 15047667 15047763 -130541525 + MIR SINE MIR 88 186 -76 244 250 45 45 chr10 15047764 15047896 -130541392 + L2 LINE L2 2376 2507 -807 554 241 156 71 chr10 15048064 15048513 -130540775 + L2 LINE L2 2826 3312 -1 252 261 43 22 chr10 15048919 15049011 -130540277 - MIR SINE MIR -87 175 82 2336 97 3 7 chr10 15049697 15050005 -130539283 + AluSx SINE Alu 1 307 -5 1403 226 26 0 chr10 15050014 15050324 -130538964 - L1 LINE L1 -797 5349 5032 1947 199 35 9 chr10 15050324 15050750 -130538538 + L1MB1 LINE L1 5729 6165 -3 182 279 16 0 chr10 15050879 15050940 -130538348 - MIR SINE MIR -124 138 77 892 125 0 0 chr10 15051552 15051672 -130537616 + FLAM_C SINE Alu 1 120 -23 1580 183 3 7 chr10 15052682 15052972 -130536316 - AluJo SINE Alu -23 289 1 760 177 8 0 chr10 15052973 15053097 -130536191 - AluJo/FLAM SINE Alu -186 126 2 197 254 73 0 chr10 15053142 15053197 -130536091 + L2 LINE L2 3209 3267 -5 180 0 0 0 chr10 15053954 15053974 -130535314 + (TGAA)n Simple_repeat Simple_repeat 4 23 0 318 26 0 0 chr10 15055031 15055070 -130534218 + (CA)n Simple_repeat Simple_repeat 1 39 0 442 228 6 11 chr10 15055475 15055655 -130533633 + CT-rich Low_complexity Low_complexity 2 180 0 796 151 78 50 chr10 15057220 15057399 -130531889 + MLT1B LTR MaLR 1 184 -206 200 119 0 48 chr10 15057403 15057445 -130531843 + (TCCC)n Simple_repeat Simple_repeat 1 40 0 1083 195 10 5 chr10 15057479 15057679 -130531609 + MLT1B LTR MaLR 188 388 -2 215 288 0 41 chr10 15058213 15058286 -130531002 + L2 LINE L2 3201 3270 -2 987 235 76 90 chr10 15059065 15059619 -130529669 - MLT1H LTR MaLR 0 549 4 2655 192 46 38 chr10 15059915 15060524 -130528764 - MLT1E3 LTR MaLR 0 624 11 2453 86 0 0 chr10 15060793 15061094 -130528194 + AluY SINE Alu 1 301 -10 405 0 0 0 chr10 15062216 15062261 -130527027 + (TA)n Simple_repeat Simple_repeat 2 46 0 609 242 112 51 chr10 15062402 15062617 -130526671 - MLT1E3 LTR MaLR -67 557 330 214 268 16 0 chr10 15062623 15062746 -130526542 + (TA)n Simple_repeat Simple_repeat 1 125 0 289 274 91 16 chr10 15063500 15063686 -130525602 + L1M4 LINE L1 3249 3448 -2698 2156 135 0 6 chr10 15063692 15064003 -130525285 - AluSx SINE Alu -3 309 1 2204 108 0 0 chr10 15064580 15064876 -130524412 + AluSx SINE Alu 1 296 -16 752 236 186 92 chr10 15064982 15065122 -130524166 - L2 LINE L2 -1080 2234 2109 2348 102 0 13 chr10 15065122 15065427 -130523861 + AluSx SINE Alu 1 301 -11 752 236 186 92 chr10 15065427 15065779 -130523509 - L2 LINE L2 -1205 2109 1682 2255 128 0 0 chr10 15065779 15066077 -130523211 + AluSx SINE Alu 2 299 -13 752 236 186 92 chr10 15066077 15066138 -130523150 - L2 LINE L2 -1632 1682 1628 337 325 60 40 chr10 15066186 15066386 -130522902 + L2 LINE L2 2865 3068 -204 24 32 0 0 chr10 15066661 15066692 -130522596 + AT_rich Low_complexity Low_complexity 1 31 0 25 0 0 0 chr10 15066855 15066880 -130522408 + AT_rich Low_complexity Low_complexity 1 25 0 1841 156 20 7 chr10 15067372 15067673 -130521615 + AluJb SINE Alu 1 305 -7 292 336 7 18 chr10 15067673 15067878 -130521410 + GA-rich Low_complexity Low_complexity 1 202 0 508 181 0 0 chr10 15068548 15068631 -130520657 + AluSc SINE Alu 141 223 -86 3284 215 80 38 chr10 15068652 15069181 -130520107 - L1ME1 LINE L1 -6 6160 5655 1684 175 46 117 chr10 15069181 15069286 -130520002 + MLT1C LTR MaLR 1 112 -355 1983 138 7 0 chr10 15069286 15069575 -130519713 + AluSx SINE Alu 1 291 -21 1684 175 46 117 chr10 15069575 15069967 -130519321 + MLT1C LTR MaLR 112 463 -4 3284 215 80 38 chr10 15069967 15070741 -130518547 - L1ME1 LINE L1 -511 5655 4915 2540 65 3 0 chr10 15070741 15071048 -130518240 - AluSc SINE Alu -1 308 1 3284 215 80 38 chr10 15071048 15071265 -130518023 - L1ME1 LINE L1 -1251 4915 4709 2102 64 0 0 chr10 15071265 15071516 -130517772 - L1PA7 LINE L1 -2 6152 5902 3284 215 80 38 chr10 15071516 15071886 -130517402 - L1ME1 LINE L1 -1457 4709 4187 453 307 60 60 chr10 15072852 15073040 -130516248 - L2 LINE L2 -4 3268 3078 2267 78 4 0 chr10 15073040 15073321 -130515967 - AluSg SINE Alu -13 297 16 453 307 60 60 chr10 15073321 15073383 -130515905 - L2 LINE L2 -193 3079 3018 2019 119 4 0 chr10 15074279 15074557 -130514731 + AluSx SINE Alu 7 285 -27 1699 148 4 4 chr10 15075111 15075375 -130513913 + AluSx SINE Alu 29 292 -20 2242 110 7 3 chr10 15075672 15075971 -130513317 + AluSx SINE Alu 1 300 -12 297 75 0 0 chr10 15075979 15076019 -130513269 + (TG)n Simple_repeat Simple_repeat 2 41 0 2225 43 0 0 chr10 15077229 15077483 -130511805 - AluY SINE Alu -8 303 50 1753 164 13 10 chr10 15078221 15078520 -130510768 + AluJo SINE Alu 1 300 -12 2412 85 3 7 chr10 15078842 15079147 -130510141 - AluSq SINE Alu -9 304 1 882 130 0 0 chr10 15079490 15079613 -130509675 + AluJ SINE Alu 11 133 -179 24 0 0 0 chr10 15079817 15079841 -130509447 + AT_rich Low_complexity Low_complexity 1 24 0 737 73 60 23 chr10 15079914 15080252 -130509036 + (TA)n Simple_repeat Simple_repeat 1 350 0 2283 76 3 3 chr10 15080252 15080541 -130508747 - AluY SINE Alu -22 289 1 30 27 0 0 chr10 15080542 15080579 -130508709 + AT_rich Low_complexity Low_complexity 1 37 0 553 168 74 108 chr10 15081283 15081486 -130507802 + AluJo SINE Alu 13 208 -104 731 223 11 40 chr10 15081895 15082070 -130507218 + AluJ SINE Alu 118 287 -25 529 285 24 6 chr10 15083005 15083170 -130506118 - MER45A DNA AcHobo 0 178 11 2263 93 3 26 chr10 15083232 15083545 -130505743 + AluSx SINE Alu 1 306 -6 2396 79 0 3 chr10 15083546 15083850 -130505438 + AluY SINE Alu 2 304 -7 2260 108 14 0 chr10 15084133 15084428 -130504860 + AluSx SINE Alu 1 299 -13 25 31 0 0 chr10 15084748 15084780 -130504508 + AT_rich Low_complexity Low_complexity 1 32 0 2308 89 0 13 chr10 15085331 15085635 -130503653 + AluY SINE Alu 1 300 -11 548 194 144 94 chr10 15085751 15085952 -130503336 + L1ME LINE L1 6 216 -5854 2104 120 7 7 chr10 15086025 15086333 -130502955 + AluSx SINE Alu 1 308 -4 216 158 0 0 chr10 15086333 15086371 -130502917 + GA-rich Low_complexity Low_complexity 1 38 0 567 304 12 41 chr10 15086386 15086629 -130502659 + L1ME LINE L1 260 495 -5575 2215 127 0 0 chr10 15086841 15087148 -130502140 - AluSx SINE Alu -5 307 1 2178 134 0 0 chr10 15087443 15087750 -130501538 - AluSx SINE Alu -5 307 1 219 88 0 0 chr10 15088129 15088163 -130501125 + (GA)n Simple_repeat Simple_repeat 1 34 0 897 163 18 24 chr10 15088354 15088520 -130500768 - MLT1B LTR MaLR -205 185 21 1258 311 92 38 chr10 15088581 15089046 -130500242 - L1MEd LINE L1 -5333 786 265 1993 204 127 54 chr10 15089046 15089171 -130500117 + MLT1E LTR MaLR 1 116 -477 1644 173 10 33 chr10 15089171 15089472 -130499816 + AluJb SINE Alu 1 294 -18 1993 204 127 54 chr10 15089472 15089899 -130499389 + MLT1E LTR MaLR 116 593 0 1258 311 92 38 chr10 15089899 15090175 -130499113 - L1MEd LINE L1 -5854 265 5 1755 174 0 10 chr10 15090729 15091017 -130498271 + AluJb SINE Alu 3 287 -25 248 273 34 68 chr10 15091041 15091129 -130498159 + L2 LINE L2 3005 3089 -183 209 338 137 24 chr10 15091480 15091794 -130497494 + L2 LINE L2 2715 3058 -214 748 277 119 13 chr10 15091889 15092124 -130497164 - MIR SINE MIR -1 261 2 364 257 83 42 chr10 15092489 15092633 -130496655 - MIR3 SINE MIR -10 198 49 1589 180 33 91 chr10 15093239 15093634 -130495654 - MLT1A2 LTR MaLR -2 372 1 3089 230 60 68 chr10 15093640 15094877 -130494411 - MLT1A2-int LTR MaLR -7 1364 5 1393 232 126 69 chr10 15094881 15095229 -130494059 - MLT2B1 LTR ERVL 0 520 134 2149 137 0 0 chr10 15095229 15095528 -130493760 - AluSx SINE Alu -13 299 1 1393 232 126 69 chr10 15095528 15095671 -130493617 - MLT2B1 LTR ERVL -386 134 1 357 221 124 138 chr10 15096021 15096238 -130493050 - MIR SINE MIR -1 261 48 267 377 11 2 chr10 15096361 15096478 -130492810 + MIR SINE MIR 32 147 -64 4111 117 35 2 chr10 15098008 15098599 -130490689 - L1PB3 LINE L1 0 6154 5544 2529 77 0 3 chr10 15098600 15098912 -130490376 - AluY SINE Alu 0 311 1 204 98 0 176 chr10 15098983 15099034 -130490254 + L2 LINE L2 3272 3313 0 2174 104 0 0 chr10 15099217 15099523 -130489765 + AluSg SINE Alu 3 308 0 1599 167 11 0 chr10 15099830 15100117 -130489171 + L1 LINE L1 4629 4918 -1228 447 133 4 0 chr10 15100169 15100248 -130489040 - L1PB3 LINE L1 -677 5479 5399 640 170 30 10 chr10 15100256 15100408 -130488880 + L1MD3 LINE L1 6857 7041 -793 882 249 4 0 chr10 15100914 15101139 -130488149 + L1M4 LINE L1 2650 2875 -3271 1231 237 125 24 chr10 15101244 15101661 -130487627 - MLT1C LTR MaLR -8 459 1 2175 213 101 9 chr10 15101661 15102336 -130486952 + L1M4 LINE L1 943 1679 -4863 22 0 0 0 chr10 15103137 15103159 -130486129 + AT_rich Low_complexity Low_complexity 1 22 0 606 129 0 0 chr10 15103658 15103743 -130485545 + AluSc SINE Alu 213 297 -12 1733 228 119 46 chr10 15104059 15104339 -130484949 - L1MC4 LINE L1 -3 8039 7781 1669 179 10 3 chr10 15104339 15104629 -130484659 - AluJo SINE Alu -18 294 3 1733 228 119 46 chr10 15104629 15105038 -130484250 - L1MC4 LINE L1 -261 7781 7300 1562 137 47 8 chr10 15105138 15105394 -130483894 + AluJo SINE Alu 41 306 -6 22 0 0 0 chr10 15105437 15105459 -130483829 + AT_rich Low_complexity Low_complexity 1 22 0 239 163 47 0 chr10 15105466 15105509 -130483779 - L2 LINE L2 -260 3053 3009 2362 96 0 0 chr10 15105589 15105892 -130483396 - AluSx SINE Alu -9 303 1 198 277 0 0 chr10 15106015 15106062 -130483226 - MIR3 SINE MIR -15 193 147 613 162 10 0 chr10 15106580 15106679 -130482609 + MER46A DNA MER2_type 137 236 0 1440 244 150 31 chr10 15106778 15106938 -130482350 + L1M4 LINE L1 2613 2753 -3891 2504 72 0 3 chr10 15106938 15107244 -130482044 + AluY SINE Alu 1 305 -6 1440 244 150 31 chr10 15107244 15107910 -130481378 + L1M4 LINE L1 2753 3537 -3107 288 226 124 138 chr10 15108088 15108305 -130480983 - MIR SINE MIR -1 261 48 267 377 11 2 chr10 15108429 15108546 -130480742 + MIR SINE MIR 32 147 -64 2133 108 0 23 chr10 15109342 15109648 -130479640 + AluSx SINE Alu 3 301 -11 226 288 94 100 chr10 15110757 15110927 -130478361 - L2 LINE L2 -5 3267 3099 5377 139 55 6 chr10 15110949 15111804 -130477484 + MER4D LTR ERV1 2 898 -5 252 200 0 0 chr10 15112155 15112210 -130477078 - L1ME4a LINE L1 0 6121 6067 1897 132 24 14 chr10 15112233 15112529 -130476759 - AluSx SINE Alu -13 299 1 22 0 0 0 chr10 15112769 15112791 -130476497 + AT_rich Low_complexity Low_complexity 1 22 0 670 236 152 6 chr10 15112904 15113082 -130476206 + LTR16C LTR ERVL 288 491 0 2240 95 14 0 chr10 15113267 15113562 -130475726 + AluSp SINE Alu 1 299 -14 578 309 68 16 chr10 15114353 15114591 -130474697 + MIR SINE MIR 4 242 -20 607 238 84 0 chr10 15116072 15116215 -130473073 - Charlie8 DNA MER1_type -2235 182 28 2203 141 133 8 chr10 15116882 15117266 -130472022 - MSTB1 LTR MaLR 0 432 1 189 0 0 0 chr10 15117362 15117383 -130471905 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 953 61 0 0 chr10 15117383 15117498 -130471790 - AluSg/x SINE Alu -32 280 166 468 242 98 7 chr10 15117560 15117713 -130471575 - LTR16C LTR ERVL -2 489 323 1771 143 7 7 chr10 15119753 15120039 -130469249 - AluJb SINE Alu -10 302 17 247 108 27 0 chr10 15120603 15120640 -130468648 - U2 snRNA snRNA -150 38 1 743 264 51 36 chr10 15120682 15120958 -130468330 - L2 LINE L2 -1 3312 3033 2007 112 17 24 chr10 15121102 15121423 -130467865 + AluSx SINE Alu 1 312 0 2100 136 147 5 chr10 15122816 15123183 -130466105 + MSTA LTR MaLR 7 425 -3 2246 172 108 31 chr10 15123195 15123678 -130465610 + MLT2B1 LTR ERVL 1 520 0 210 283 0 0 chr10 15124157 15124203 -130465085 - L2 LINE L2 -82 3190 3145 1511 123 5 9 chr10 15124321 15124540 -130464748 - AluJb SINE Alu -14 298 81 2154 166 35 29 chr10 15124740 15125288 -130464000 + MLT2A2 LTR ERVL 1 554 0 730 78 0 0 chr10 15125347 15125437 -130463851 - 5S rRNA rRNA -31 90 1 234 0 0 0 chr10 15125830 15125856 -130463432 + (A)n Simple_repeat Simple_repeat 1 26 0 2249 148 0 3 chr10 15126329 15126659 -130462629 + MER7A DNA MER2_type 1 327 -19 271 273 0 13 chr10 15126671 15126748 -130462540 + L2 LINE L2 3193 3268 -4 439 308 123 18 chr10 15127969 15128120 -130461168 - L2 LINE L2 -6 3307 3173 2609 112 3 5 chr10 15128120 15128496 -130460792 - THE1C LTR MaLR 0 375 1 439 308 123 18 chr10 15128496 15128620 -130460668 - L2 LINE L2 -140 3173 3003 2132 118 6 19 chr10 15129972 15130285 -130459003 - AluSc SINE Alu 0 309 1 195 225 0 0 chr10 15130617 15130657 -130458631 - L2 LINE L2 -5 3267 3228 1984 142 10 7 chr10 15131028 15131338 -130457950 + AluJb SINE Alu 1 311 -1 3684 103 33 70 chr10 15131349 15132011 -130457277 + L1MA4A LINE L1 5658 6295 -8 202 277 9 62 chr10 15132661 15132773 -130456515 + L3b LINE CR1 1379 1484 -99 675 282 63 66 chr10 15133061 15133169 -130456119 + MLT1K LTR MaLR 116 223 -365 1725 115 77 71 chr10 15133169 15133508 -130455780 - MER61A LTR ERV1 0 343 3 675 282 63 66 chr10 15133508 15133810 -130455478 + MLT1K LTR MaLR 223 525 -63 204 67 0 0 chr10 15133814 15133844 -130455444 + (A)n Simple_repeat Simple_repeat 1 30 0 2222 103 33 0 chr10 15134026 15134328 -130454960 - AluSx SINE Alu 0 312 1 641 176 9 0 chr10 15134476 15134584 -130454704 - MER7A DNA MER2_type -239 107 1 6427 109 33 29 chr10 15134937 15135972 -130453316 - L1MA5 LINE L1 -2 6298 5260 1879 179 6 0 chr10 15135970 15136323 -130452965 + L1MA5 LINE L1 4921 5275 -871 * 949 251 8 47 chr10 15136317 15136552 -130452736 - L1M3de LINE L1 -6071 582 357 * 873 244 65 101 chr10 15136538 15136668 -130452620 - L1M3de LINE L1 -5710 943 810 * 1225 163 178 38 chr10 15136668 15136932 -130452356 - AluJb SINE Alu -1 301 1 873 244 65 101 chr10 15136932 15137180 -130452108 - L1M3de LINE L1 -5843 810 2 315 320 30 44 chr10 15137558 15137761 -130451527 - L1ME LINE L1 -359 5762 5563 1928 170 0 3 chr10 15137816 15138128 -130451160 + AluJb SINE Alu 1 311 -1 1033 256 6 19 chr10 15138781 15139131 -130450157 + LTR16A LTR ERVL 52 440 -10 185 323 11 21 chr10 15139140 15139233 -130450055 - MIR SINE MIR -168 94 3 2575 52 0 0 chr10 15139280 15139586 -130449702 + AluY SINE Alu 1 306 -5 232 254 0 127 chr10 15139588 15139645 -130449643 - MER5B DNA MER1_type -54 124 88 687 182 0 0 chr10 15139645 15139755 -130449533 + MER81 DNA DNA 5 114 0 232 254 0 127 chr10 15139755 15139815 -130449473 - MER5B DNA MER1_type -90 88 22 206 250 0 36 chr10 15139775 15139831 -130449457 + MER5A DNA MER1_type 130 183 -6 * 516 200 77 8 chr10 15139939 15140069 -130449219 - MIR SINE MIR -101 161 23 204 333 75 25 chr10 15140369 15140489 -130448799 - L2 LINE L2 -10 3262 3137 221 182 18 0 chr10 15140549 15140604 -130448684 + CT-rich Low_complexity Low_complexity 3 58 0 210 329 0 14 chr10 15140966 15141036 -130448252 + MIR SINE MIR 20 88 -174 1984 156 0 3 chr10 15141068 15141370 -130447918 - AluJo SINE Alu -10 302 2 3589 71 4 0 chr10 15141592 15142043 -130447245 + MLT2A2 LTR ERVL 1 453 0 2409 94 0 0 chr10 15142232 15142530 -130446758 + AluSx SINE Alu 1 298 -14 590 223 0 36 chr10 15142718 15142857 -130446431 + LTR16A LTR ERVL 259 392 -58 230 318 143 32 chr10 15143086 15143240 -130446048 - MER5A DNA MER1_type -2 187 17 * 311 252 165 8 chr10 15143115 15143242 -130446046 + MER5A DNA MER1_type 43 189 0 230 313 64 73 chr10 15143254 15143596 -130445692 - MLT1K LTR MaLR -115 473 135 2260 125 0 0 chr10 15144187 15144491 -130444797 + AluSx SINE Alu 1 304 -8 2795 74 0 0 chr10 15144491 15144868 -130444420 + L1PA7 LINE L1 5802 6178 0 1792 175 35 38 chr10 15145881 15146110 -130443178 - MLT1A1 LTR MaLR 0 365 136 2262 115 3 3 chr10 15146110 15146422 -130442866 + AluSx SINE Alu 1 312 0 1792 175 35 38 chr10 15146422 15146558 -130442730 - MLT1A1 LTR MaLR -229 136 1 1496 170 42 64 chr10 15146756 15147068 -130442220 - AluJo SINE Alu -7 305 1 2026 150 3 13 chr10 15147078 15147392 -130441896 - AluJo SINE Alu -1 311 1 2083 111 26 88 chr10 15147711 15148047 -130441241 - THE1B LTR MaLR -2 362 51 2280 103 0 13 chr10 15148047 15148349 -130440939 + AluSx SINE Alu 1 298 -14 2083 111 26 88 chr10 15148349 15148398 -130440890 - THE1B LTR MaLR -313 51 1 231 250 0 0 chr10 15149746 15149830 -130439458 + (CA)n Simple_repeat Simple_repeat 1 84 0 2141 153 49 35 chr10 15149837 15150380 -130438908 + MLT2A2 LTR ERVL 1 554 0 183 259 0 0 chr10 15150380 15150438 -130438850 + (CA)n Simple_repeat Simple_repeat 1 58 0 377 257 76 0 chr10 15150949 15151054 -130438234 - L2 LINE L2 -1 3271 3159 1708 171 73 0 chr10 15151059 15151345 -130437943 + AluJb SINE Alu 1 307 -5 1806 156 33 23 chr10 15151620 15151927 -130437361 + AluJb SINE Alu 1 310 -2 309 109 0 0 chr10 15151941 15151987 -130437301 + (GGGA)n Simple_repeat Simple_repeat 4 49 0 506 259 91 49 chr10 15152080 15152378 -130436910 + LTR33 LTR ERVL 97 445 -76 2245 98 3 7 chr10 15152378 15152685 -130436603 - AluSc SINE Alu -3 306 1 506 259 91 49 chr10 15152685 15152766 -130436522 + LTR33 LTR ERVL 445 521 0 855 189 0 7 chr10 15152972 15153125 -130436163 - FRAM SINE Alu -14 152 1 301 263 59 25 chr10 15153403 15153521 -130435767 - MIR SINE MIR -24 238 117 2243 112 3 3 chr10 15153537 15153841 -130435447 + AluSx SINE Alu 1 304 -8 413 217 76 0 chr10 15154533 15154625 -130434663 - MER94 DNA DNA -34 100 2 1201 203 28 80 chr10 15155101 15155123 -130434165 - L1MA9 LINE L1 -38 6274 6252 2296 81 7 7 chr10 15155123 15155419 -130433869 + AluSx SINE Alu 1 296 -16 1201 203 28 80 chr10 15155419 15155786 -130433502 - L1MA9 LINE L1 -60 6252 5905 8812 187 23 17 chr10 15155859 15156321 -130432967 - L1MA9 LINE L1 -366 5946 5488 2241 91 3 3 chr10 15156321 15156606 -130432682 - AluSp SINE Alu -21 292 8 8812 187 23 17 chr10 15156606 15158601 -130430687 - L1MA9 LINE L1 -824 5488 3481 2118 143 0 0 chr10 15159772 15160073 -130429215 + AluSx SINE Alu 1 301 -11 214 384 48 0 chr10 15160453 15160578 -130428710 - MIR SINE MIR -53 209 79 502 120 13 0 chr10 15160752 15160827 -130428461 - MADE1 DNA Mariner -4 76 1 2850 178 13 5 chr10 15161120 15161671 -130427617 - MLT2B1 LTR ERVL 0 554 1 2343 104 0 13 chr10 15161846 15162162 -130427126 - AluSx SINE Alu 0 312 1 234 0 0 0 chr10 15162757 15162783 -130426505 + (A)n Simple_repeat Simple_repeat 1 26 0 2266 115 0 6 chr10 15163161 15163475 -130425813 - AluSx SINE Alu 0 312 1 191 271 112 28 chr10 15163528 15163635 -130425653 - MIR3 SINE MIR -3 205 90 1769 171 26 10 chr10 15164275 15164580 -130424708 - AluSx SINE Alu -2 310 1 1191 190 52 54 chr10 15164765 15165219 -130424069 + LTR29 LTR ERV1 138 644 0 2247 95 6 25 chr10 15165247 15165563 -130423725 - AluSx SINE Alu -2 310 1 333 0 0 0 chr10 15166198 15166235 -130423053 + (TG)n Simple_repeat Simple_repeat 2 38 0 4466 178 9 57 chr10 15166550 15166676 -130422612 + L1MB3 LINE L1 5208 5338 -845 2156 150 0 0 chr10 15166676 15166983 -130422305 + AluSx SINE Alu 1 307 -5 4466 178 9 57 chr10 15166983 15167772 -130421516 + L1MB3 LINE L1 5338 6163 -20 4032 149 12 22 chr10 15167772 15168155 -130421133 + LTR51 LTR ERV1 1 375 -296 1463 161 0 74 chr10 15168155 15168440 -130420848 - AluJo SINE Alu -21 291 28 4032 149 12 22 chr10 15168440 15168734 -130420554 + LTR51 LTR ERV1 375 671 0 4466 178 9 57 chr10 15168734 15168784 -130420504 + L1MB3 LINE L1 6163 6128 -55 2085 98 8 4 chr10 15168784 15169068 -130420220 + AluSg SINE Alu 1 285 -25 256 20 41 41 chr10 15169068 15169117 -130420171 + (CAAAA)n Simple_repeat Simple_repeat 2 180 0 4466 178 9 57 chr10 15169117 15169161 -130420127 + L1MB3 LINE L1 6127 6172 -11 1947 149 0 10 chr10 15170019 15170315 -130418973 - AluSx SINE Alu -19 293 1 5343 169 24 22 chr10 15170550 15171211 -130418077 + L1MC2 LINE L1 5122 5734 -610 2466 121 5 24 chr10 15171211 15171582 -130417706 - THE1B LTR MaLR 0 364 1 5343 169 24 22 chr10 15171582 15172186 -130417102 + L1MC2 LINE L1 5734 6335 -9 550 146 0 0 chr10 15172242 15172324 -130416964 + FRAM SINE Alu 43 124 -52 384 22 0 0 chr10 15172367 15172412 -130416876 + (CA)n Simple_repeat Simple_repeat 2 46 0 257 152 22 0 chr10 15172417 15172463 -130416825 - MER5B DNA MER1_type -46 132 86 579 241 0 0 chr10 15172463 15172571 -130416717 + Tigger3(Golem) DNA MER2_type 1 108 -2921 * 4363 120 29 41 chr10 15172563 15172854 -130416434 + Tigger3(Golem) DNA MER2_type 2278 2571 -457 2098 121 7 7 chr10 15172854 15173144 -130416144 - AluSg SINE Alu -20 290 1 4363 120 29 41 chr10 15173144 15173574 -130415714 + Tigger3(Golem) DNA MER2_type 2571 2992 -36 2301 112 0 0 chr10 15173574 15173877 -130415411 - AluSx SINE Alu -9 303 1 4363 120 29 41 chr10 15173877 15173913 -130415375 + Tigger3(Golem) DNA MER2_type 2992 3027 -1 696 138 0 0 chr10 15174103 15174212 -130415076 + L1MA2 LINE L1 6196 6304 0 1986 115 4 11 chr10 15174243 15174522 -130414766 + AluSx SINE Alu 1 277 -35 202 182 0 0 chr10 15174545 15174578 -130414710 + polypurine Low_complexity Low_complexity 2 34 0 283 196 0 0 chr10 15175130 15175186 -130414102 + L1ME LINE L1 5579 5634 -487 3255 134 2 2 chr10 15175655 15176140 -130413148 + L1PA15 LINE L1 5679 6163 -2 431 282 103 34 chr10 15176834 15177355 -130411933 + HAL1 LINE L1 619 1200 -1307 291 216 0 0 chr10 15177369 15177419 -130411869 - MLT1F1 LTR MaLR 0 542 493 2476 212 38 22 chr10 15177419 15177919 -130411369 + MLT2B3 LTR ERVL 1 508 -46 1686 199 145 8 chr10 15178133 15178519 -130410769 - MLT1F1 LTR MaLR -47 520 82 216 218 146 0 chr10 15178643 15178698 -130410590 + MIR SINE MIR 89 151 -111 2109 109 7 13 chr10 15178748 15179052 -130410236 + AluSx SINE Alu 2 303 -9 1820 214 45 75 chr10 15179205 15179776 -130409512 - MLT2B3 LTR ERVL 0 554 1 2079 97 0 49 chr10 15179986 15180274 -130409014 + AluSx SINE Alu 3 276 -36 441 193 0 48 chr10 15180274 15180461 -130408827 + GA-rich Low_complexity Low_complexity 3 180 0 221 136 0 23 chr10 15180463 15180507 -130408781 + (GGAA)n Simple_repeat Simple_repeat 2 44 0 228 236 59 71 chr10 15180842 15180981 -130408307 - MIR SINE MIR -67 141 42 681 233 112 8 chr10 15181477 15181914 -130407374 + LTR33A LTR ERVL 1 519 -4 476 265 45 23 chr10 15181957 15182089 -130407199 + MIR3 SINE MIR 33 167 -41 2281 111 0 0 chr10 15182197 15182494 -130406794 - AluSx SINE Alu -15 297 1 7411 47 2 0 chr10 15182785 15183957 -130405331 - L1PA6 LINE L1 0 6154 4983 2020 192 15 5 chr10 15184010 15184405 -130404883 - L1MB7 LINE L1 -54 6130 5732 * 2250 179 32 6 chr10 15184400 15184974 -130404314 - L1MB7 LINE L1 -661 5517 4935 251 35 0 0 chr10 15185960 15185989 -130403299 + LTR6A LTR ERV1 73 101 -463 1233 208 50 13 chr10 15186144 15186462 -130402826 - L1M4 LINE L1 -1094 5052 4723 1461 197 7 124 chr10 15187346 15187758 -130401530 - MLT1A2 LTR MaLR 0 374 11 1354 105 0 0 chr10 15187763 15187934 -130401354 - AluSg/x SINE Alu -8 304 134 2342 100 3 0 chr10 15187934 15188234 -130401054 - AluSq SINE Alu -12 301 1 4007 103 2 0 chr10 15188701 15189227 -130400061 - MER1A DNA MER1_type 0 527 1 1319 260 60 16 chr10 15189327 15189692 -130399596 + LTR16C LTR ERVL 36 416 -75 189 0 0 0 chr10 15190272 15190293 -130398995 + (TG)n Simple_repeat Simple_repeat 1 21 0 1493 221 0 20 chr10 15190939 15191237 -130398051 - AluJo SINE Alu -17 295 4 331 203 0 0 chr10 15191248 15191317 -130397971 - MIR SINE MIR -108 154 86 249 322 44 0 chr10 15191333 15191423 -130397865 - L2 LINE L2 -17 3296 3203 539 185 42 111 chr10 15191536 15191595 -130397693 - MER5B DNA MER1_type -2 176 115 4589 56 0 0 chr10 15191595 15192150 -130397138 + L1PA8 LINE L1 5608 6162 -10 539 185 42 111 chr10 15192150 15192279 -130397009 - MER5B DNA MER1_type -63 115 1 399 335 118 20 chr10 15192538 15192688 -130396600 - L2 LINE L2 -562 2752 2618 655 171 9 0 chr10 15192688 15192799 -130396489 - MER81 DNA DNA 0 114 3 399 335 118 20 chr10 15192799 15193039 -130396249 - L2 LINE L2 -696 2618 2324 274 235 147 59 chr10 15193094 15193196 -130396092 - L2 LINE L2 -18 3254 3144 2213 116 0 0 chr10 15193221 15193513 -130395775 + AluSx SINE Alu 1 292 -20 2024 163 42 0 chr10 15193565 15193896 -130395392 + MER7A DNA MER2_type 1 343 -3 331 346 8 0 chr10 15193948 15194075 -130395213 - MER94 DNA DNA -3 131 4 316 79 22 93 chr10 15194740 15194879 -130394409 + (TTATA)n Simple_repeat Simple_repeat 1 129 0 234 243 40 20 chr10 15194916 15195068 -130394220 + (TATAA)n Simple_repeat Simple_repeat 5 159 0 462 284 65 14 chr10 15195590 15195778 -130393510 - MIR SINE MIR -64 198 4 1656 113 4 9 chr10 15196318 15196549 -130392739 - MER30 DNA MER1_type 0 230 1 534 108 24 0 chr10 15196685 15196768 -130392520 - AluY SINE Alu -11 300 216 1447 115 42 0 chr10 15197123 15197340 -130391948 - MER30 DNA MER1_type 0 230 5 204 262 119 32 chr10 15198120 15198246 -130391042 - MIR3 SINE MIR -25 183 47 253 274 16 0 chr10 15199190 15199252 -130390036 + GA-rich Low_complexity Low_complexity 4 66 0 1605 168 33 4 chr10 15199281 15199594 -130389694 + AluSx SINE Alu 1 321 0 312 27 0 0 chr10 15199705 15199742 -130389546 + (TC)n Simple_repeat Simple_repeat 1 37 0 324 321 23 59 chr10 15199951 15200172 -130389116 - MIR SINE MIR -20 242 30 607 261 145 48 chr10 15200779 15201193 -130388095 - MLT1H LTR MaLR -13 536 83 726 226 97 196 chr10 15201375 15201558 -130387730 + MLT1K LTR MaLR 14 213 -375 234 91 0 0 chr10 15201558 15201591 -130387697 + (TGAA)n Simple_repeat Simple_repeat 4 36 0 726 226 97 196 chr10 15201591 15201879 -130387409 + MLT1K LTR MaLR 213 410 -178 4751 141 41 15 chr10 15201879 15202739 -130386549 + L1MC2 LINE L1 5462 6343 -1 726 226 97 196 chr10 15202739 15202894 -130386394 + MLT1K LTR MaLR 410 579 -9 2267 54 50 30 chr10 15203657 15203955 -130385333 - AluY SINE Alu -7 304 1 1919 153 0 19 chr10 15204045 15204359 -130384929 - AluJo SINE Alu -4 308 1 206 310 100 10 chr10 15204417 15204517 -130384771 + L2 LINE L2 3198 3306 -7 201 343 143 13 chr10 15204690 15205005 -130384283 + L2 LINE L2 1728 2083 -1231 25219 153 33 19 chr10 15205006 15209426 -130379862 - L1P4 LINE L1 -709 5459 974 189 74 0 0 chr10 15209426 15209453 -130379835 + (TTG)n Simple_repeat Simple_repeat 1 27 0 25219 153 33 19 chr10 15209453 15209759 -130379529 - L1P4 LINE L1 -5194 974 674 417 355 160 3 chr10 15209923 15210205 -130379083 + L2 LINE L2 2947 3272 0 545 247 96 83 chr10 15210264 15210755 -130378533 + LTR67 LTR ERVL 2 556 -1 2286 105 0 0 chr10 15212271 15212566 -130376722 + AluSx SINE Alu 1 295 -17 804 195 34 13 chr10 15212617 15212766 -130376522 + AluJo SINE Alu 12 163 -149 888 193 6 6 chr10 15213442 15213608 -130375680 - FRAM SINE Alu -10 166 1 1980 145 3 3 chr10 15214591 15214887 -130374401 + AluJo SINE Alu 1 296 -16 347 246 9 18 chr10 15215093 15215207 -130374081 + (CA)n Simple_repeat Simple_repeat 2 114 0 2188 125 7 0 chr10 15215875 15216180 -130373108 - AluSx SINE Alu -5 307 1 369 255 108 40 chr10 15216454 15216705 -130372583 + MLT1K LTR MaLR 290 557 -31 1296 96 12 0 chr10 15217262 15217428 -130371860 + AluSq SINE Alu 62 229 -84 207 100 0 0 chr10 15217438 15217468 -130371820 + (A)n Simple_repeat Simple_repeat 1 30 0 235 261 75 60 chr10 15217755 15217889 -130371399 - MIR3 SINE MIR -37 171 36 423 345 7 0 chr10 15217916 15218064 -130371224 + L2 LINE L2 3123 3271 -1 1330 171 56 0 chr10 15218228 15218462 -130370826 + MLT2C1 LTR ERVL 1 247 -150 4667 91 25 5 chr10 15218464 15219110 -130370178 + L1PA13 LINE L1 5502 6160 -3 547 250 66 7 chr10 15219273 15219409 -130369879 + MLT2C1 LTR ERVL 234 377 -20 186 43 0 0 chr10 15219835 15219858 -130369430 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 458 265 24 36 chr10 15220346 15220512 -130368776 + MER5B DNA MER1_type 1 164 -14 761 169 50 12 chr10 15220673 15220833 -130368455 + FRAM SINE Alu 1 166 0 2269 81 7 3 chr10 15220838 15221166 -130368122 + AluSp SINE Alu 1 329 0 431 305 20 33 chr10 15221448 15221599 -130367689 + L2 LINE L2 3123 3271 -1 1961 161 0 0 chr10 15221649 15221953 -130367335 - AluSq SINE Alu -9 304 1 2124 92 0 0 chr10 15222720 15222982 -130366306 + AluSx SINE Alu 50 311 -1 2039 127 13 3 chr10 15223540 15223840 -130365448 - AluSx SINE Alu -9 303 1 481 312 13 0 chr10 15224023 15224177 -130365111 - MLT1L LTR MaLR -132 483 328 1750 125 0 4 chr10 15224456 15224696 -130364592 + AluSx SINE Alu 43 283 -29 432 0 0 0 chr10 15224696 15224744 -130364544 + (CA)n Simple_repeat Simple_repeat 1 48 0 2058 117 7 0 chr10 15224922 15225212 -130364076 + AluSx SINE Alu 1 292 -20 445 210 83 38 chr10 15228425 15228582 -130360706 - L2 LINE L2 -456 2858 2695 6410 206 42 17 chr10 15228678 15228958 -130360330 + L1 LINE L1 3423 3695 -2451 216 97 0 0 chr10 15228958 15228989 -130360299 + (TA)n Simple_repeat Simple_repeat 2 32 0 * 507 17 0 0 chr10 15228988 15229048 -130360240 + (GA)n Simple_repeat Simple_repeat 2 61 0 6410 206 42 17 chr10 15228989 15229048 -130360240 + L1 LINE L1 3695 3751 -2395 1919 115 11 0 chr10 15229048 15229318 -130359970 - AluSx SINE Alu -39 273 1 6410 206 42 17 chr10 15229318 15230524 -130358764 + L1 LINE L1 3747 4948 -1194 565 171 0 0 chr10 15230524 15230629 -130358659 + L1MB3 LINE L1 6075 6179 -4 2128 118 0 10 chr10 15231306 15231612 -130357676 - AluSg SINE Alu -7 303 1 2304 113 0 0 chr10 15232169 15232478 -130356810 + AluSg SINE Alu 1 309 -1 283 304 80 0 chr10 15232497 15232622 -130356666 - MER104 DNA Tc2 -4 176 42 279 0 0 0 chr10 15232902 15232933 -130356355 + (A)n Simple_repeat Simple_repeat 1 31 0 1385 152 76 0 chr10 15233276 15233539 -130355749 + L1MA4 LINE L1 6012 6294 -6 26 30 0 0 chr10 15233546 15233579 -130355709 + AT_rich Low_complexity Low_complexity 1 33 0 697 203 15 0 chr10 15233606 15233739 -130355549 - AluJo SINE Alu -176 136 2 511 294 0 75 chr10 15233843 15233998 -130355290 + MIR SINE MIR 10 140 -122 2153 110 3 0 chr10 15233998 15234290 -130354998 + AluY SINE Alu 1 293 -18 511 294 0 75 chr10 15234290 15234386 -130354902 + MIR SINE MIR 140 242 -20 203 152 0 0 chr10 15238501 15238534 -130350754 + (TTCA)n Simple_repeat Simple_repeat 4 36 0 675 213 100 30 chr10 15238821 15239051 -130350237 - MIR SINE MIR -15 247 2 5580 57 1 0 chr10 15239156 15239836 -130349452 + L1PA6 LINE L1 5463 6143 -11 255 241 213 9 chr10 15239847 15239955 -130349333 + L1MC/D LINE L1 5637 5766 -2042 1484 171 0 33 chr10 15239974 15240249 -130349039 + AluJb SINE Alu 1 266 -46 210 71 0 0 chr10 15240308 15240336 -130348952 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 23 0 0 0 chr10 15240435 15240458 -130348830 + AT_rich Low_complexity Low_complexity 1 23 0 2329 170 31 87 chr10 15240500 15241042 -130348246 - MER41C LTR ERV1 0 554 43 564 104 0 0 chr10 15241042 15241119 -130348169 + MER41B LTR ERV1 9 85 -550 597 300 112 58 chr10 15241710 15241912 -130347376 + MLT1K LTR MaLR 24 214 -374 2177 115 10 0 chr10 15241912 15242200 -130347088 + AluSg SINE Alu 1 291 -19 597 300 112 58 chr10 15242200 15242533 -130346755 + MLT1K LTR MaLR 214 588 0 362 226 81 16 chr10 15242818 15242942 -130346346 + HAL1 LINE L1 2204 2335 -172 319 284 67 42 chr10 15242955 15243194 -130346094 + HAL1 LINE L1 2257 2501 -6 260 257 46 46 chr10 15243389 15243498 -130345790 + HAL1 LINE L1 2386 2494 -13 2391 60 0 60 chr10 15244304 15244623 -130344665 + AluY SINE Alu 1 300 -11 1367 195 164 0 chr10 15245034 15245332 -130343956 + MER7A DNA MER2_type 1 345 -1 2379 96 3 0 chr10 15245391 15245692 -130343596 - AluSx SINE Alu -10 302 1 2303 116 3 3 chr10 15246040 15246351 -130342937 - AluSq SINE Alu -2 311 1 294 196 120 68 chr10 15247115 15247248 -130342040 + HAL1 LINE L1 58 197 -2310 1745 157 14 17 chr10 15247628 15247921 -130341367 - AluJb SINE Alu -5 307 16 1246 183 100 95 chr10 15247930 15248171 -130341117 + L1MD3 LINE L1 6746 6991 -1004 2053 145 0 0 chr10 15248171 15248460 -130340828 + AluSx SINE Alu 1 289 -23 1246 183 100 95 chr10 15248460 15248628 -130340660 + L1MD3 LINE L1 6991 7157 -838 1299 243 122 32 chr10 15248752 15249221 -130340067 - LTR33 LTR ERVL -1 520 10 787 227 0 0 chr10 15249681 15249844 -130339444 - FRAM SINE Alu -10 166 4 361 331 8 8 chr10 15250172 15250299 -130338989 + MIR SINE MIR 21 147 -61 213 273 0 136 chr10 15251205 15251295 -130337993 - L2 LINE L2 -226 3046 2984 2230 126 30 30 chr10 15251295 15251659 -130337629 - THE1B LTR MaLR 0 364 1 213 273 0 136 chr10 15251659 15251722 -130337566 - L2 LINE L2 -288 2984 2914 1369 179 44 44 chr10 15252300 15252596 -130336692 + AluJb SINE Alu 1 296 -16 1541 221 60 12 chr10 15252597 15252999 -130336289 - L1ME1 LINE L1 -15 6151 5731 * 1741 183 20 17 chr10 15252996 15253352 -130335936 - L1ME1 LINE L1 -1200 4946 4590 1158 260 66 55 chr10 15253420 15253760 -130335528 - MER74B LTR ERVL -83 539 191 2120 125 3 10 chr10 15253760 15254055 -130335233 + AluSx SINE Alu 1 293 -19 1158 260 66 55 chr10 15254055 15254183 -130335105 - MER74B LTR ERVL -431 191 66 795 189 63 17 chr10 15254239 15254414 -130334874 + MLT1D LTR MaLR 9 191 -314 2375 95 3 0 chr10 15254474 15254778 -130334510 + AluSp SINE Alu 1 305 -8 2732 20 0 0 chr10 15254877 15255174 -130334114 + AluYa5 SINE Alu 1 297 -14 10636 27 1 0 chr10 15255299 15257302 -130331986 + L1PA4 LINE L1 4151 6153 -2 28 48 0 0 chr10 15257606 15257648 -130331640 + AT_rich Low_complexity Low_complexity 1 42 0 708 188 61 1 chr10 15257688 15257848 -130331440 + MLT1A1 LTR MaLR 214 365 0 2342 117 0 0 chr10 15258030 15258338 -130330950 - AluSx SINE Alu -4 308 1 1953 147 0 7 chr10 15258438 15258730 -130330558 + AluJb SINE Alu 1 290 -22 4438 172 44 9 chr10 15259208 15259463 -130329825 + L1MB1 LINE L1 4518 4762 -1406 2232 124 0 3 chr10 15259463 15259761 -130329527 + AluSx SINE Alu 1 297 -15 4438 172 44 9 chr10 15259761 15260988 -130328300 + L1MB1 LINE L1 4762 6044 -124 1581 157 29 32 chr10 15261372 15261685 -130327603 + AluJo SINE Alu 1 312 0 1286 262 171 19 chr10 15261706 15262455 -130326833 - L2 LINE L2 -1480 1834 972 721 206 0 14 chr10 15262678 15262824 -130326464 - FRAM SINE Alu -6 170 27 325 281 55 20 chr10 15262826 15262972 -130326316 + L2 LINE L2 1356 1506 -1808 258 286 0 31 chr10 15264072 15264170 -130325118 + L1ME4a LINE L1 5961 6055 -66 1197 174 109 62 chr10 15264177 15264452 -130324836 - AluJo SINE Alu -7 305 18 227 241 48 72 chr10 15264560 15264643 -130324645 - MIR SINE MIR -65 197 117 232 337 24 0 chr10 15264921 15265004 -130324284 - MIR SINE MIR -146 116 32 5189 199 75 71 chr10 15265195 15266116 -130323172 + L1MC4 LINE L1 6469 7385 -657 2213 84 3 11 chr10 15266116 15266422 -130322866 - AluSg SINE Alu 0 304 1 5189 199 75 71 chr10 15266422 15266711 -130322577 + L1MC4 LINE L1 7385 7671 -371 866 148 0 15 chr10 15266711 15266846 -130322442 + FLAM_C SINE Alu 1 133 0 5189 199 75 71 chr10 15266846 15267200 -130322088 + L1MC4 LINE L1 7671 8041 -1 1929 137 14 0 chr10 15267209 15267501 -130321787 + AluJo SINE Alu 1 296 -16 186 133 0 0 chr10 15267501 15267531 -130321757 + (TATATG)n Simple_repeat Simple_repeat 2 31 0 251 158 0 0 chr10 15267538 15267576 -130321712 + U2 snRNA snRNA 1 38 -150 2023 129 23 3 chr10 15268050 15268352 -130320936 + AluSq SINE Alu 1 308 -5 3939 132 41 50 chr10 15268669 15269402 -130319886 - L1PB3 LINE L1 -8 6146 5421 435 344 26 10 chr10 15269767 15269962 -130319326 - MIR SINE MIR -15 247 50 2176 115 10 0 chr10 15270062 15270357 -130318931 + AluSx SINE Alu 1 298 -14 2547 47 7 0 chr10 15270934 15271233 -130318055 - AluY SINE Alu -10 301 1 2356 93 0 3 chr10 15271524 15271825 -130317463 - AluSg SINE Alu -10 300 1 269 64 5 101 chr10 15271889 15271980 -130317308 + Alu SINE Alu 1 52 -250 2222 110 19 50 chr10 15272773 15273190 -130316098 + MER11C LTR ERVK 668 1071 0 988 206 149 36 chr10 15273190 15273525 -130315763 + L1ME2 LINE L1 5674 6046 -118 2395 99 0 0 chr10 15274235 15274539 -130314749 + AluSx SINE Alu 1 304 -8 374 147 54 12 chr10 15274871 15274986 -130314302 - AluS SINE Alu -8 293 228 282 294 4 35 chr10 15275363 15275497 -130313791 + CT-rich Low_complexity Low_complexity 1 129 0 2016 127 31 3 chr10 15275769 15276061 -130313227 + AluSx SINE Alu 1 300 -12 1008 238 14 5 chr10 15276560 15276770 -130312518 + MER58A DNA MER1_type 3 214 -10 373 295 32 32 chr10 15276833 15276989 -130312299 + L2 LINE L2 3158 3313 0 1219 211 55 52 chr10 15277926 15278290 -130310998 - MLT1A1 LTR MaLR 0 365 1 201 340 72 0 chr10 15278515 15278612 -130310676 - MIR SINE MIR -87 121 47 252 156 0 0 chr10 15278905 15278950 -130310338 - Charlie1b DNA MER1_type -8 515 471 638 99 0 22 chr10 15279270 15279361 -130309927 + AluJb SINE Alu 200 288 -24 22 70 0 0 chr10 15279888 15279931 -130309357 + GC_rich Low_complexity Low_complexity 1 43 0 21 36 0 0 chr10 15279987 15280015 -130309273 + GC_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr10 15280156 15280186 -130309102 + GC_rich Low_complexity Low_complexity 1 30 0 301 205 256 0 chr10 15280682 15280760 -130308528 - AluJ/FLAM SINE Alu -204 98 1 969 228 112 0 chr10 15280764 15281005 -130308283 - Charlie1b DNA MER1_type -255 268 1 205 289 79 0 chr10 15281230 15281306 -130307982 - L2 LINE L2 -266 3047 2966 459 227 16 23 chr10 15281349 15281477 -130307811 + L2 LINE L2 3167 3293 -20 583 255 89 46 chr10 15281618 15281920 -130307368 - L2 LINE L2 -945 2369 2055 2352 76 0 3 chr10 15283003 15283293 -130305995 + AluY SINE Alu 23 311 0 2178 77 14 3 chr10 15283328 15283613 -130305675 + AluY SINE Alu 1 288 -23 430 244 15 61 chr10 15283658 15283931 -130305357 + MER46C DNA MER2_type 6 338 0 2011 104 7 0 chr10 15283990 15284260 -130305028 - AluSx SINE Alu -40 272 1 584 198 60 82 chr10 15284460 15284642 -130304646 - MER5B DNA MER1_type 0 178 1 2425 87 55 63 chr10 15285525 15285892 -130303396 + MER51A LTR ERV1 1 364 -270 7423 36 11 0 chr10 15286029 15287641 -130301647 + L1PA5 LINE L1 4520 6146 -8 23 0 0 0 chr10 15287641 15287664 -130301624 + AT_rich Low_complexity Low_complexity 1 23 0 1061 141 0 65 chr10 15287731 15287916 -130301372 - FRAM SINE Alu -10 166 1 470 299 12 102 chr10 15287922 15288166 -130301122 - MLT1B LTR MaLR -90 300 79 28 0 0 0 chr10 15288764 15288792 -130300496 + AT_rich Low_complexity Low_complexity 1 28 0 232 269 76 35 chr10 15288799 15288996 -130300292 + L1M4 LINE L1 3775 3979 -2167 1687 122 8 16 chr10 15288997 15289242 -130300046 + AluJb SINE Alu 1 243 -69 477 138 30 22 chr10 15289346 15289449 -130299839 - L1P5 LINE L1 -396 5758 5652 198 71 0 0 chr10 15289450 15289478 -130299810 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 2135 133 3 0 chr10 15289483 15289785 -130299503 + AluSx SINE Alu 4 306 -6 2120 129 7 7 chr10 15289999 15290308 -130298980 + AluSx SINE Alu 1 309 -3 1825 186 0 0 chr10 15290639 15290945 -130298343 - AluJo SINE Alu -5 307 2 532 189 83 8 chr10 15291005 15291137 -130298151 - L1ME3 LINE L1 -1 6161 6020 933 160 97 55 chr10 15292374 15292483 -130296805 - MER2 DNA MER2_type -4 341 238 1979 117 3 23 chr10 15292483 15292782 -130296506 + AluSx SINE Alu 1 293 -19 933 160 97 55 chr10 15292782 15292814 -130296474 - MER2 DNA MER2_type -107 238 209 1966 117 122 35 chr10 15292814 15293169 -130296119 + MSTA LTR MaLR 1 395 -33 2254 109 3 0 chr10 15293169 15293471 -130295817 - AluSx SINE Alu -9 303 1 1966 117 122 35 chr10 15293471 15293509 -130295779 + MSTA LTR MaLR 395 428 0 933 160 97 55 chr10 15293509 15293603 -130295685 - MER2 DNA MER2_type -136 209 95 1010 125 26 0 chr10 15294480 15294632 -130294656 + AluSg/x SINE Alu 138 293 -17 251 82 82 61 chr10 15295492 15295541 -130293747 + MLT1J LTR MaLR 393 442 -69 2611 144 13 27 chr10 15295622 15295919 -130293369 + MER65A LTR ERV1 1 291 -154 2077 114 0 29 chr10 15295919 15296225 -130293063 - AluSx SINE Alu -15 297 1 2611 144 13 27 chr10 15296225 15296378 -130292910 + MER65A LTR ERV1 291 445 0 474 206 10 0 chr10 15296436 15296538 -130292750 + MER5A DNA MER1_type 9 111 -78 2366 111 5 37 chr10 15296593 15296972 -130292316 - L1PB3 LINE L1 -1 6153 5787 2242 94 0 13 chr10 15297003 15297312 -130291976 - AluY SINE Alu -6 305 1 611 126 0 1 chr10 15297773 15298156 -130291132 + AluSx SINE Alu 1 428 0 207 0 0 0 chr10 15298159 15298182 -130291106 + (CAG)n Simple_repeat Simple_repeat 3 25 0 741 165 0 0 chr10 15298182 15298431 -130290857 + GA-rich Low_complexity Low_complexity 1 249 0 756 117 0 18 chr10 15298439 15298610 -130290678 + (GAA)n Simple_repeat Simple_repeat 3 170 0 606 267 134 9 chr10 15298726 15298943 -130290345 - MIR SINE MIR -17 245 2 1677 132 20 66 chr10 15298993 15299296 -130289992 + AluJb SINE Alu 1 289 -23 30 59 0 0 chr10 15299506 15299557 -130289731 + AT_rich Low_complexity Low_complexity 1 51 0 2079 143 3 0 chr10 15299670 15299970 -130289318 + AluSx SINE Alu 1 301 -11 2133 122 3 3 chr10 15300426 15300722 -130288566 + AluSc SINE Alu 1 296 -13 1642 158 6 76 chr10 15300786 15301116 -130288172 + AluJb SINE Alu 3 309 -3 815 191 198 0 chr10 15301391 15301553 -130287735 + AluJo SINE Alu 1 194 -118 585 308 49 51 chr10 15301618 15301682 -130287606 - L1MEd LINE L1 -5284 835 772 2064 125 23 3 chr10 15301682 15301985 -130287303 - AluSx SINE Alu -3 309 1 585 308 49 51 chr10 15301985 15302310 -130286978 - L1MEd LINE L1 -5347 772 447 489 357 18 47 chr10 15302416 15302626 -130286662 - L1MEd LINE L1 -5305 814 618 2466 97 0 0 chr10 15302626 15302937 -130286351 + AluSq SINE Alu 1 311 -2 489 357 18 47 chr10 15302937 15303107 -130286181 - L1MEd LINE L1 -5501 618 445 521 164 16 16 chr10 15303525 15303645 -130285643 + (TA)n Simple_repeat Simple_repeat 2 124 -5 2119 110 0 10 chr10 15303645 15303936 -130285352 - AluSc SINE Alu -21 288 1 521 164 16 16 chr10 15303936 15303943 -130285345 + (TA)n Simple_repeat Simple_repeat 123 129 0 1852 270 74 28 chr10 15303996 15304908 -130284380 - L2 LINE L2 0 3313 2358 2245 118 3 6 chr10 15304908 15305221 -130284067 - AluSx SINE Alu 0 312 1 1852 270 74 28 chr10 15305221 15305255 -130284033 - L2 LINE L2 -955 2358 2327 1297 219 16 39 chr10 15305256 15305567 -130283721 + MLT2D LTR ERVL 68 371 -43 312 109 5 5 chr10 15305607 15305665 -130283623 + MLT2C2 LTR ERVL 424 464 0 853 280 69 15 chr10 15305665 15305997 -130283291 - L2 LINE L2 -995 2319 1970 1879 181 3 3 chr10 15306121 15306431 -130282857 + AluSx SINE Alu 1 310 -2 306 238 75 0 chr10 15306676 15306756 -130282532 - L2 LINE L2 0 3272 3187 28 29 0 0 chr10 15307724 15307759 -130281529 + AT_rich Low_complexity Low_complexity 1 35 0 769 300 52 43 chr10 15307835 15308162 -130281126 - MER102b DNA MER1_type -1 340 11 2097 128 13 0 chr10 15308712 15309018 -130280270 + AluSx SINE Alu 1 310 -2 2086 80 33 23 chr10 15311741 15312041 -130277247 + AluSx SINE Alu 1 303 -9 36 53 0 0 chr10 15312464 15312521 -130276767 + AT_rich Low_complexity Low_complexity 1 57 0 322 220 25 85 chr10 15313257 15313375 -130275913 - MIR SINE MIR -46 216 106 833 174 21 47 chr10 15313833 15314023 -130275265 - L1MD1 LINE L1 0 6242 6058 463 176 146 67 chr10 15316575 15316740 -130272548 + MIR SINE MIR 39 216 -46 23 0 0 0 chr10 15317156 15317179 -130272109 + AT_rich Low_complexity Low_complexity 1 23 0 198 296 99 42 chr10 15317971 15318032 -130271256 + MIR3 SINE MIR 38 94 -114 1793 122 111 7 chr10 15318032 15318311 -130270977 - AluSg1 SINE Alu -1 308 1 198 296 99 42 chr10 15318311 15318391 -130270897 + MIR3 SINE MIR 94 187 -21 207 0 0 0 chr10 15318673 15318696 -130270592 + (TAGG)n Simple_repeat Simple_repeat 1 23 0 395 290 7 39 chr10 15319009 15319164 -130270124 + MIR SINE MIR 63 212 -50 304 311 47 9 chr10 15319885 15319991 -130269297 + MIR3 SINE MIR 4 113 -95 228 265 170 41 chr10 15320372 15320519 -130268769 + MIR SINE MIR 47 212 -50 27 62 0 0 chr10 15321190 15321238 -130268050 + AT_rich Low_complexity Low_complexity 1 48 0 228 393 28 14 chr10 15321439 15321584 -130267704 + MIR3 SINE MIR 16 162 -46 1915 136 13 30 chr10 15322432 15322733 -130266555 + AluSx SINE Alu 1 296 -16 215 375 77 0 chr10 15323154 15323258 -130266030 - L2 LINE L2 -5 3267 3156 336 374 56 17 chr10 15324608 15324787 -130264501 + MIR3 SINE MIR 10 195 -13 685 176 52 0 chr10 15326679 15326815 -130262473 - MER3 DNA MER1_type 0 209 67 195 114 0 0 chr10 15327692 15327727 -130261561 + (TG)n Simple_repeat Simple_repeat 2 36 0 803 200 59 106 chr10 15328089 15328344 -130260944 - MIR SINE MIR -18 244 2 1774 170 13 3 chr10 15328470 15328770 -130260518 + AluJb SINE Alu 1 303 -9 595 324 115 34 chr10 15328909 15329535 -130259753 - L1MC4a LINE L1 -1878 5930 5254 638 254 20 46 chr10 15330630 15330827 -130258461 - MIR SINE MIR -51 211 20 376 339 138 43 chr10 15330891 15331239 -130258049 - HAL1 LINE L1 -1837 670 290 243 271 46 80 chr10 15331304 15331455 -130257833 - HAL1 LINE L1 -2341 166 21 323 261 328 5 chr10 15331493 15331688 -130257600 - L1ME LINE L1 -303 5818 5561 360 294 206 23 chr10 15331772 15332126 -130257162 - L1ME LINE L1 -1496 4650 4232 1177 268 144 30 chr10 15332143 15333144 -130256144 - L2 LINE L2 0 3313 1726 1505 154 61 0 chr10 15333257 15333503 -130255785 - AluJo SINE Alu -51 261 1 2309 92 0 0 chr10 15333624 15333919 -130255369 + AluSc SINE Alu 1 295 -14 502 108 48 0 chr10 15333923 15334006 -130255282 - AluSg/x SINE Alu -14 298 212 225 0 0 0 chr10 15336314 15336339 -130252949 + (CA)n Simple_repeat Simple_repeat 1 25 0 1815 71 4 0 chr10 15336654 15336879 -130252409 - AluY SINE Alu -7 304 79 357 82 0 0 chr10 15337009 15337058 -130252230 + (TG)n Simple_repeat Simple_repeat 2 50 0 2176 119 7 7 chr10 15337086 15337388 -130251900 - AluSx SINE Alu -10 302 1 232 206 135 76 chr10 15337711 15337853 -130251435 - MIR SINE MIR -28 180 35 717 177 0 0 chr10 15339776 15339906 -130249382 - FRAM SINE Alu -6 170 41 21 0 0 0 chr10 15340927 15340948 -130248340 + AT_rich Low_complexity Low_complexity 1 21 0 2221 89 7 10 chr10 15343871 15344173 -130245115 - AluSq SINE Alu -12 301 1 3933 149 57 34 chr10 15344348 15344431 -130244857 - L1MB8 LINE L1 0 6178 6098 2486 81 0 0 chr10 15344431 15344739 -130244549 + AluSx SINE Alu 3 310 -2 3933 149 57 34 chr10 15344739 15345625 -130243663 - L1MB8 LINE L1 -80 6098 5190 675 313 26 0 chr10 15345763 15345955 -130243333 + MIR SINE MIR 31 227 -35 358 352 156 9 chr10 15346013 15346436 -130242852 + L2 LINE L2 2043 2527 -787 202 296 0 0 chr10 15346993 15347047 -130242241 + L2 LINE L2 2798 2851 -463 380 235 47 0 chr10 15347086 15347171 -130242117 - L2 LINE L2 -5 3267 3179 189 361 73 79 chr10 15347185 15347526 -130241762 + L2 LINE L2 2899 3237 -35 494 346 75 61 chr10 15347663 15347943 -130241345 - L2 LINE L2 -4 3268 2985 205 357 62 36 chr10 15347992 15348216 -130241072 - L2 LINE L2 -518 2796 2567 490 337 99 40 chr10 15348640 15349212 -130240076 - L2 LINE L2 -1 3271 2650 189 271 205 74 chr10 15349226 15349360 -130239928 - L2 LINE L2 -1132 2182 2067 2331 93 0 7 chr10 15349360 15349661 -130239627 + AluSc SINE Alu 1 299 -10 189 271 205 74 chr10 15349661 15349828 -130239460 - L2 LINE L2 -1247 2067 1923 2338 81 7 3 chr10 15349828 15350126 -130239162 + AluSp SINE Alu 1 299 -14 189 271 205 74 chr10 15350126 15350203 -130239085 - L2 LINE L2 -1391 1923 1753 216 188 325 0 chr10 15350451 15350531 -130238757 - L2 LINE L2 -1606 1708 1603 324 298 23 30 chr10 15350622 15350753 -130238535 - L2 LINE L2 -1891 1423 1294 1490 172 107 0 chr10 15351409 15351671 -130237617 - AluJb SINE Alu -22 290 1 413 326 159 41 chr10 15352119 15352910 -130236378 - L2 LINE L2 -208 3064 2174 1710 96 4 38 chr10 15353823 15353998 -130235290 - AluSg SINE Alu -14 296 131 2628 19 6 13 chr10 15353998 15354310 -130234978 - AluY SINE Alu -1 310 1 1710 96 4 38 chr10 15354310 15354395 -130234893 - AluSg SINE Alu -179 131 45 2849 10 0 0 chr10 15355363 15355674 -130233614 - AluY SINE Alu 0 311 1 2229 99 10 10 chr10 15356170 15356483 -130232805 - AluSq SINE Alu 0 313 1 978 180 71 86 chr10 15356712 15356937 -130232351 - MER33 DNA MER1_type -2262 323 103 2119 121 3 6 chr10 15356937 15357250 -130232038 - AluSx SINE Alu 0 312 1 978 180 71 86 chr10 15357250 15357363 -130231925 - MER33 DNA MER1_type -2482 103 1 186 43 0 0 chr10 15359091 15359114 -130230174 + (TA)n Simple_repeat Simple_repeat 1 23 0 478 265 68 104 chr10 15359123 15359372 -130229916 - MIR SINE MIR -21 241 2 1557 169 8 8 chr10 15360072 15360338 -130228950 + AluJo SINE Alu 26 291 -21 382 242 75 38 chr10 15361629 15361815 -130227473 + L1MC5 LINE L1 7724 7916 -45 270 238 170 20 chr10 15362161 15362308 -130226980 - MIR3 SINE MIR -7 201 33 1383 188 74 116 chr10 15412536 15413020 -130176268 - SATR1 Satellite Satellite 0 470 7 1264 203 221 48 chr10 15413057 15413937 -130175351 - SATR1 Satellite Satellite -1 1031 1 878 227 278 3 chr10 15413965 15414296 -130174992 - SATR1 Satellite Satellite -1 469 48 1352 126 27 31 chr10 15414300 15414523 -130174765 - AluSq SINE Alu -91 222 1 694 248 40 0 chr10 15416422 15416620 -130172668 + MER6B DNA MER2_type 5 210 0 344 301 20 7 chr10 15416725 15416871 -130172417 - MER5B DNA MER1_type -6 172 25 2132 114 0 63 chr10 15417029 15417362 -130171926 - AluSp SINE Alu -1 312 1 348 238 105 35 chr10 15417367 15417510 -130171778 - HsTC2 DNA Tc2 -115 1783 1631 1404 215 2 69 chr10 15417552 15417731 -130171557 + L1MA4 LINE L1 5771 5910 -390 1683 160 4 7 chr10 15417731 15418012 -130171276 + AluSx SINE Alu 1 280 -32 1404 215 2 69 chr10 15418012 15418236 -130171052 + L1MA4 LINE L1 5910 6147 -153 1303 125 5 5 chr10 15418399 15418599 -130170689 - AluSp SINE Alu -113 200 1 2930 237 24 51 chr10 15418644 15419639 -130169649 + L1MB3 LINE L1 4818 5838 -345 2097 119 0 10 chr10 15419639 15419949 -130169339 + AluSx SINE Alu 6 312 0 2930 237 24 51 chr10 15419949 15420075 -130169213 + L1MB3 LINE L1 5838 5966 -217 1929 138 10 0 chr10 15420075 15420365 -130168923 + AluSx SINE Alu 12 304 -8 2930 237 24 51 chr10 15420365 15420612 -130168676 + L1MB3 LINE L1 5966 6151 -32 212 158 0 0 chr10 15421397 15421435 -130167853 + (ATG)n Simple_repeat Simple_repeat 3 40 0 2126 117 0 10 chr10 15422061 15422369 -130166919 + AluSg SINE Alu 1 305 -5 206 327 44 26 chr10 15422774 15422887 -130166401 + L2 LINE L2 3158 3272 0 2049 103 0 20 chr10 15422953 15423254 -130166034 - AluSc SINE Alu -14 295 1 936 220 197 29 chr10 15424950 15425360 -130163928 - SATR1 Satellite Satellite -1 478 1 1019 228 245 34 chr10 15425407 15426246 -130163042 - SATR1 Satellite Satellite -1 1015 1 869 251 271 4 chr10 15426328 15427407 -130161881 - SATR1 Satellite Satellite -144 1367 1 1469 227 112 30 chr10 15427499 15428758 -130160530 - SATR1 Satellite Satellite 0 1362 1 21 36 0 0 chr10 15428804 15428832 -130160456 + AT_rich Low_complexity Low_complexity 1 28 0 217 223 11 71 chr10 15428851 15429035 -130160253 + (TTA)n Simple_repeat Simple_repeat 3 175 0 15951 112 14 5 chr10 15429114 15431410 -130157878 + HERVE LTR ERV1 1108 3423 -4390 1280 139 5 0 chr10 15431512 15431713 -130157575 + AluSg/x SINE Alu 103 304 -6 396 0 0 0 chr10 15432180 15432224 -130157064 + (TTTA)n Simple_repeat Simple_repeat 2 45 0 894 134 0 7 chr10 15432227 15432369 -130156919 - AluSg/x SINE Alu -26 283 143 824 133 113 0 chr10 15432425 15432576 -130156712 - AluY SINE Alu -9 302 135 1880 177 39 21 chr10 15432578 15432967 -130156321 + L1MB7 LINE L1 5700 6095 -89 2157 91 10 3 chr10 15432997 15433293 -130155995 - AluSx SINE Alu -14 298 1 1918 116 11 0 chr10 15433318 15433602 -130155686 + AluSx SINE Alu 1 287 -25 331 177 25 0 chr10 15433708 15433787 -130155501 + AluS SINE Alu 220 300 -1 1427 218 24 40 chr10 15434781 15435003 -130154285 + MLT1A1 LTR MaLR 1 216 -149 2056 109 0 23 chr10 15435003 15435306 -130153982 + AluSx SINE Alu 1 296 -16 1427 218 24 40 chr10 15435306 15435454 -130153834 + MLT1A1 LTR MaLR 216 365 0 25 31 0 0 chr10 15435619 15435651 -130153637 + AT_rich Low_complexity Low_complexity 1 32 0 246 272 43 22 chr10 15435887 15435979 -130153309 + L1ME LINE L1 5559 5652 -469 1798 129 27 7 chr10 15436126 15436421 -130152867 - AluSq SINE Alu -12 301 1 239 298 80 27 chr10 15436513 15436701 -130152587 - L1M4 LINE L1 -2235 3911 3714 351 276 20 91 chr10 15436708 15436722 -130152566 - L1M4 LINE L1 -3099 3047 3034 1850 128 21 3 chr10 15436722 15437011 -130152277 - AluSx SINE Alu -18 294 1 351 276 20 91 chr10 15437011 15437116 -130152172 - L1M4 LINE L1 -3112 3034 2923 1417 204 3 11 chr10 15437116 15437448 -130151840 - AluJo SINE Alu 0 330 1 351 276 20 91 chr10 15437448 15437580 -130151708 - L1M4 LINE L1 -3223 2923 2812 1055 257 148 42 chr10 15437802 15438291 -130150997 + MLT2F LTR ERVL 1 543 -120 265 279 47 23 chr10 15438291 15438377 -130150911 - LTR52 LTR ERVL 0 421 334 189 195 0 0 chr10 15438408 15438449 -130150839 + (CA)n Simple_repeat Simple_repeat 1 41 0 313 245 199 0 chr10 15438583 15438717 -130150571 - LTR52 LTR ERVL -240 181 13 1700 144 16 7 chr10 15438717 15439022 -130150266 + AluSx SINE Alu 1 308 -4 313 245 199 0 chr10 15439022 15439038 -130150250 - LTR52 LTR ERVL -408 13 1 231 305 48 0 chr10 15439045 15439150 -130150138 + MLT2F LTR ERVL 552 661 -2 427 247 141 59 chr10 15439151 15439406 -130149882 - L1M4 LINE L1 -3643 2503 2228 1907 107 24 0 chr10 15439431 15439721 -130149567 - AluSx SINE Alu -15 297 1 2690 13 0 0 chr10 15439755 15440060 -130149228 - AluYb8 SINE Alu -13 305 1 2151 123 0 0 chr10 15440381 15440691 -130148597 + AluSx SINE Alu 1 310 -2 1148 166 0 5 chr10 15440784 15440983 -130148305 + AluJb SINE Alu 85 282 -30 216 0 0 0 chr10 15440985 15441009 -130148279 + (CAAT)n Simple_repeat Simple_repeat 2 25 0 686 261 51 20 chr10 15441009 15441262 -130148026 + LTR16C LTR ERVL 231 491 0 810 111 0 16 chr10 15441493 15441619 -130147669 - AluJ SINE Alu -1 311 188 620 226 67 77 chr10 15441727 15442113 -130147175 + LTR15 LTR ERV1 112 596 0 817 151 157 18 chr10 15442113 15442279 -130147009 - AluJ SINE Alu -119 193 5 1953 127 3 0 chr10 15442569 15442890 -130146398 - AluSq SINE Alu 0 322 1 1879 108 46 32 chr10 15443008 15443328 -130145960 - THE1B LTR MaLR -3 372 1 2569 197 72 2 chr10 15443335 15443852 -130145436 + MER68 LTR ERV1 6 558 -4 1927 134 3 0 chr10 15444101 15444392 -130144896 - AluSx SINE Alu -19 293 2 1700 144 7 52 chr10 15444452 15444758 -130144530 + AluJo SINE Alu 7 298 -14 466 251 120 31 chr10 15444864 15445055 -130144233 - HERVL68 LTR ERVL -439 2598 2391 2040 97 17 7 chr10 15445153 15445443 -130143845 - AluSx SINE Alu -18 294 2 188 234 65 52 chr10 15445493 15445570 -130143718 - L2 LINE L2 -81 3232 3155 1818 121 6 53 chr10 15445728 15445840 -130143448 + AluSx SINE Alu 1 117 -195 3371 100 4 0 chr10 15445840 15446291 -130142997 + MLT2A2 LTR ERVL 1 453 0 1818 121 6 53 chr10 15446291 15446500 -130142788 + AluSx SINE Alu 117 307 -5 1832 136 7 14 chr10 15446728 15447023 -130142265 - AluSx SINE Alu -11 301 9 300 167 26 13 chr10 15447305 15447383 -130141905 + GA-rich Low_complexity Low_complexity 2 80 0 653 199 53 74 chr10 15447404 15447705 -130141583 - MSTD LTR MaLR 0 396 103 2147 108 3 0 chr10 15448109 15448406 -130140882 - AluSq SINE Alu -15 298 1 402 260 12 82 chr10 15448897 15449034 -130140254 + MER5A DNA MER1_type 8 142 -47 1954 108 10 10 chr10 15449034 15449329 -130139959 + AluSg SINE Alu 1 295 -15 402 260 12 82 chr10 15449329 15449374 -130139914 + MER5A DNA MER1_type 142 189 0 1248 176 10 80 chr10 15450060 15450236 -130139052 - AluJo SINE Alu -31 281 133 1998 134 0 13 chr10 15450236 15450542 -130138746 + AluSx SINE Alu 1 302 -10 1248 176 10 80 chr10 15450542 15450667 -130138621 - AluJo SINE Alu -179 133 1 208 284 95 21 chr10 15450790 15450885 -130138403 + L2 LINE L2 2909 3010 -262 * 249 213 0 0 chr10 15450873 15450920 -130138368 - L2 LINE L2 -1 3312 3266 2038 75 4 4 chr10 15451108 15451374 -130137914 - AluSg SINE Alu -8 302 37 257 253 229 41 chr10 15451963 15452133 -130137155 - MIR SINE MIR -13 249 48 2011 128 3 0 chr10 15452543 15452855 -130136433 + AluSq SINE Alu 1 313 0 237 310 0 0 chr10 15454337 15454408 -130134880 - L2 LINE L2 -65 3248 3178 195 380 47 18 chr10 15454752 15454858 -130134430 + L2 LINE L2 1873 1974 -1340 2259 96 3 3 chr10 15454858 15455171 -130134117 - AluSp SINE Alu 0 313 1 2039 121 0 3 chr10 15455172 15455470 -130133818 - AluSx SINE Alu -15 297 1 195 380 47 18 chr10 15455470 15455635 -130133653 + L2 LINE L2 1973 2154 -1160 2173 110 0 3 chr10 15455745 15456046 -130133242 - AluSq SINE Alu -13 300 1 1228 93 44 6 chr10 15456046 15456223 -130133065 - L1MA1 LINE L1 -47 6255 6072 221 361 23 15 chr10 15456226 15456356 -130132932 + L2 LINE L2 2458 2588 -726 507 254 51 74 chr10 15456359 15456443 -130132845 + MIR SINE MIR 2 86 -176 2457 58 0 10 chr10 15456443 15456753 -130132535 - AluY SINE Alu -4 307 1 507 254 51 74 chr10 15456753 15456885 -130132403 + MIR SINE MIR 86 213 -49 1807 122 44 10 chr10 15457060 15457356 -130131932 - AluSq SINE Alu -2 311 6 441 271 57 32 chr10 15457638 15457885 -130131403 - L1MEc LINE L1 -3904 2636 2384 23 0 0 0 chr10 15458015 15458038 -130131250 + AT_rich Low_complexity Low_complexity 1 23 0 490 157 0 34 chr10 15458038 15458127 -130131161 - AluSg/x SINE Alu -5 304 219 722 280 70 24 chr10 15458131 15458644 -130130644 - L1MEc LINE L1 -4474 2107 1522 1601 131 0 4 chr10 15459403 15459647 -130129641 + AluSx SINE Alu 63 305 -7 1647 112 116 8 chr10 15459657 15459947 -130129341 + AluSg SINE Alu 1 318 0 1633 113 4 4 chr10 15460059 15460299 -130128989 - AluSx SINE Alu -10 302 63 218 286 12 24 chr10 15460629 15460713 -130128575 + CT-rich Low_complexity Low_complexity 2 84 0 1753 117 10 38 chr10 15461020 15461310 -130127978 + AluSx SINE Alu 15 296 -16 1989 133 0 0 chr10 15461809 15462111 -130127177 - AluSx SINE Alu -10 302 1 1751 140 14 4 chr10 15462415 15462694 -130126594 + AluSp SINE Alu 1 282 -31 180 0 0 0 chr10 15462694 15462714 -130126574 + (T)n Simple_repeat Simple_repeat 1 20 0 1359 225 4 0 chr10 15462745 15463021 -130126267 - AluJo SINE Alu -30 282 6 400 212 51 8 chr10 15463587 15463705 -130125583 - L1MEc LINE L1 -4129 2267 2145 830 126 0 0 chr10 15463731 15463850 -130125438 + FLAM_C SINE Alu 3 121 -22 1860 130 0 0 chr10 15463859 15464135 -130125153 - AluSx SINE Alu -10 302 27 2295 70 3 3 chr10 15464135 15464434 -130124854 - AluY SINE Alu -10 301 1 299 143 0 0 chr10 15464434 15464476 -130124812 - AluSx SINE Alu -259 42 1 277 229 0 12 chr10 15464530 15464613 -130124675 - L1MEc LINE L1 -4282 2114 2033 1483 88 0 0 chr10 15464654 15464867 -130124421 - AluSg/x SINE Alu 0 315 103 377 297 129 7 chr10 15465253 15465408 -130123880 - HAL1b LINE L1 -541 807 634 855 227 23 59 chr10 15465409 15465594 -130123694 - MER58A DNA MER1_type -2196 224 47 2025 133 3 3 chr10 15465594 15465896 -130123392 + AluSx SINE Alu 1 302 -10 855 227 23 59 chr10 15465896 15465930 -130123358 - MER58A DNA MER1_type -2373 47 13 807 177 0 0 chr10 15466041 15466165 -130123123 - FLAM_C SINE Alu -18 125 2 352 360 143 15 chr10 15466226 15466318 -130122970 - HAL1b LINE L1 -895 453 374 2047 98 6 44 chr10 15466318 15466634 -130122654 - AluSx SINE Alu -8 304 1 352 360 143 15 chr10 15466634 15466744 -130122544 - HAL1b LINE L1 -974 374 225 3845 152 24 61 chr10 15466744 15467310 -130121978 + MER50 LTR ERV1 1 586 -148 1500 162 16 65 chr10 15467310 15467619 -130121669 - AluJb SINE Alu -14 298 5 3845 152 24 61 chr10 15467619 15467633 -130121655 + MER50 LTR ERV1 586 599 -135 2131 113 0 7 chr10 15467633 15467934 -130121354 - AluSx SINE Alu -13 299 1 3845 152 24 61 chr10 15467934 15468090 -130121198 + MER50 LTR ERV1 599 711 -23 1362 119 0 5 chr10 15468550 15468752 -130120536 - AluSg/x SINE Alu -4 308 108 2019 121 0 0 chr10 15469444 15469724 -130119564 - AluSx SINE Alu -14 298 19 871 274 52 16 chr10 15469759 15470065 -130119223 - L1ME LINE L1 -366 5873 5557 217 71 0 48 chr10 15470182 15470224 -130119064 + (TTCC)n Simple_repeat Simple_repeat 1 40 0 1449 183 44 24 chr10 15470224 15470389 -130118899 - AluJb SINE Alu -11 301 126 180 0 0 0 chr10 15470389 15470409 -130118879 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 1449 183 44 24 chr10 15470409 15470538 -130118750 - AluJb SINE Alu -186 126 1 664 273 69 62 chr10 15470538 15470988 -130118300 - L1ME LINE L1 -865 5350 4894 1854 142 42 0 chr10 15470988 15471276 -130118012 - AluSx SINE Alu -10 302 3 664 273 69 62 chr10 15471276 15471345 -130117943 - L1ME LINE L1 -1321 4894 4827 1334 229 89 10 chr10 15471377 15471778 -130117510 - L1 LINE L1 -1265 4881 4457 1023 193 0 30 chr10 15471788 15471985 -130117303 - AluJo SINE Alu -121 191 1 886 267 65 67 chr10 15471985 15472464 -130116824 - L1ME LINE L1 -4341 2055 1578 860 138 0 28 chr10 15472510 15472691 -130116597 + (TCCC)n Simple_repeat Simple_repeat 4 179 0 2039 118 3 3 chr10 15473706 15474002 -130115286 - AluSx SINE Alu -16 296 1 1621 192 27 30 chr10 15474392 15474526 -130114762 - MER58B DNA MER1_type -2083 337 204 1663 191 0 26 chr10 15474526 15474835 -130114453 + AluJo SINE Alu 1 301 -11 1621 192 27 30 chr10 15474835 15475038 -130114250 - MER58B DNA MER1_type -2216 204 1 2258 92 3 10 chr10 15475167 15475462 -130113826 - AluSx SINE Alu -19 293 1 2454 63 3 10 chr10 15475892 15476192 -130113096 - AluSc SINE Alu -11 298 1 2132 91 14 14 chr10 15477014 15477325 -130111963 + AluSx SINE Alu 15 312 0 2020 123 0 4 chr10 15477697 15477973 -130111315 + AluSx SINE Alu 1 275 -37 1498 161 13 79 chr10 15478040 15478357 -130110931 + AluJb SINE Alu 1 296 -16 2114 129 3 16 chr10 15478488 15478799 -130110489 - AluSx SINE Alu -5 307 1 415 269 34 0 chr10 15478934 15479053 -130110235 + AluSq/x SINE Alu 2 124 -179 189 0 0 0 chr10 15479592 15479613 -130109675 + (A)n Simple_repeat Simple_repeat 1 21 0 513 97 0 0 chr10 15479927 15479999 -130109289 - MSTB LTR MaLR 0 426 355 2243 127 3 13 chr10 15479999 15480313 -130108975 + AluSx SINE Alu 1 311 -1 23 78 0 0 chr10 15480342 15480393 -130108895 + AT_rich Low_complexity Low_complexity 1 51 0 180 0 0 0 chr10 15480566 15480586 -130108702 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 1423 127 0 0 chr10 15480599 15480788 -130108500 - AluSg/x SINE Alu -27 285 97 387 0 0 0 chr10 15480945 15480988 -130108300 + (TA)n Simple_repeat Simple_repeat 2 44 0 2311 104 19 3 chr10 15480992 15481299 -130107989 - AluSx SINE Alu 0 312 1 2204 93 21 3 chr10 15481975 15482264 -130107024 + AluSg SINE Alu 17 310 0 261 0 0 0 chr10 15483213 15483242 -130106046 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 354 292 130 23 chr10 15483274 15483490 -130105798 + L1M4 LINE L1 3520 3758 -2388 2043 129 7 10 chr10 15483491 15483794 -130105494 + AluSx SINE Alu 1 302 -10 3577 244 62 16 chr10 15483818 15485603 -130103685 + L1ME LINE L1 1930 3796 -2744 2629 259 41 6 chr10 15485703 15486492 -130102796 + L1ME LINE L1 4407 5222 -1318 2341 96 0 3 chr10 15486541 15486844 -130102444 + AluSq SINE Alu 1 302 -11 461 268 147 30 chr10 15486880 15487169 -130102119 + L1ME LINE L1 5708 6025 -535 1869 227 26 12 chr10 15487185 15487603 -130101685 + Charlie1a DNA MER1_type 2 425 -1030 429 202 20 0 chr10 15487864 15487963 -130101325 + MER5A DNA MER1_type 9 109 -80 1850 149 8 69 chr10 15488237 15488465 -130100823 - MER2 DNA MER2_type 0 344 145 2124 129 0 0 chr10 15488465 15488760 -130100528 + AluSx SINE Alu 5 299 -13 1850 149 8 69 chr10 15488760 15488893 -130100395 - MER2 DNA MER2_type -199 145 5 25 0 0 0 chr10 15489527 15489552 -130099736 + AT_rich Low_complexity Low_complexity 1 25 0 2274 97 3 0 chr10 15489662 15489952 -130099336 - AluSq SINE Alu -22 291 1 752 128 7 68 chr10 15490666 15490709 -130098579 - Charlie1 DNA MER1_type 0 2761 2717 2143 129 0 7 chr10 15490709 15491004 -130098284 - AluY SINE Alu -18 293 1 752 128 7 68 chr10 15491004 15491108 -130098180 - Charlie1 DNA MER1_type -44 2717 2623 679 215 58 70 chr10 15491126 15491298 -130097990 - Charlie1 DNA MER1_type -2590 171 2 2213 87 55 0 chr10 15491551 15491840 -130097448 + AluSc SINE Alu 2 306 -3 226 284 136 25 chr10 15492629 15492791 -130096497 + MIR SINE MIR 62 241 -21 206 194 137 93 chr10 15493305 15493444 -130095844 + MIR3 SINE MIR 2 146 -62 * 414 179 32 11 chr10 15493414 15493509 -130095779 + MIR SINE MIR 116 212 -50 216 0 0 0 chr10 15493914 15493938 -130095350 + (TATG)n Simple_repeat Simple_repeat 3 26 0 347 103 0 17 chr10 15493943 15494001 -130095287 + (TCCCC)n Simple_repeat Simple_repeat 3 59 0 1698 148 15 11 chr10 15494022 15494293 -130094995 - AluJb SINE Alu -39 273 2 1499 260 48 40 chr10 15494308 15494330 -130094958 - L1MEc LINE L1 -4868 1528 1508 2103 142 0 3 chr10 15494330 15494639 -130094649 + AluSx SINE Alu 1 308 -4 1499 260 48 40 chr10 15494639 15494975 -130094313 - L1MEc LINE L1 -4888 1508 1176 2138 136 0 3 chr10 15494975 15495277 -130094011 - AluSx SINE Alu -11 301 1 1499 260 48 40 chr10 15495277 15495751 -130093537 - L1MEc LINE L1 -5220 1176 688 545 298 59 99 chr10 15495739 15496363 -130092925 - L1MEc LINE L1 -5444 761 163 * 399 247 195 11 chr10 15496988 15497178 -130092110 + MIR SINE MIR 37 261 -1 255 245 111 96 chr10 15497212 15497546 -130091742 - L1ME4a LINE L1 -76 6045 5717 1977 173 0 0 chr10 15497546 15497846 -130091442 - AluSx SINE Alu -12 300 1 255 245 111 96 chr10 15497846 15497944 -130091344 - L1ME4a LINE L1 -404 5717 5603 1710 170 7 20 chr10 15497944 15498238 -130091050 - AluJb SINE Alu -22 290 1 255 245 111 96 chr10 15498238 15498273 -130091015 - L1ME4a LINE L1 -518 5603 5570 2445 209 24 14 chr10 15498400 15498907 -130090381 - Charlie1b DNA MER1_type -9 514 3 479 101 0 112 chr10 15499434 15499472 -130089816 + MADE1 DNA Mariner 2 26 -54 2181 120 3 0 chr10 15499472 15499764 -130089524 - AluSx SINE Alu -19 293 1 479 101 0 112 chr10 15499764 15499814 -130089474 + MADE1 DNA Mariner 26 80 0 2031 157 0 0 chr10 15500766 15501065 -130088223 + AluSx SINE Alu 1 299 -13 2212 107 3 0 chr10 15501406 15501746 -130087542 - AluSx SINE Alu 0 312 2 1144 156 69 9 chr10 15501747 15501978 -130087310 + L1MA7 LINE L1 6047 6291 0 2849 269 88 45 chr10 15502851 15503319 -130085969 - L1MCc LINE L1 -4888 1535 1089 2232 87 0 11 chr10 15503319 15503606 -130085682 - AluSq SINE Alu -27 286 3 2849 269 88 45 chr10 15503606 15504497 -130084791 - L1MCc LINE L1 -5334 1089 345 2144 129 3 0 chr10 15504497 15504799 -130084489 + AluSx SINE Alu 1 303 -9 2849 269 88 45 chr10 15504799 15505093 -130084195 - L1MCc LINE L1 -6078 345 65 2081 118 14 0 chr10 15505393 15505690 -130083598 - AluSp SINE Alu -9 304 4 2079 146 10 0 chr10 15505693 15505995 -130083293 - AluJo SINE Alu -7 305 1 289 280 75 9 chr10 15506198 15506305 -130082983 + L2 LINE L2 3118 3231 -41 2401 91 0 0 chr10 15506848 15507144 -130082144 - AluSg SINE Alu -14 296 1 301 48 0 0 chr10 15507161 15507203 -130082085 - L1MA3 LINE L1 0 6305 6264 2541 142 20 65 chr10 15507365 15507874 -130081414 - LTR19A LTR ERV1 0 486 1 2304 59 0 0 chr10 15508322 15508592 -130080696 + AluY SINE Alu 32 301 -10 1533 157 80 11 chr10 15509169 15509443 -130079845 + AluJo SINE Alu 1 293 -19 2254 97 0 7 chr10 15509687 15509976 -130079312 + AluSx SINE Alu 1 287 -25 1701 160 87 47 chr10 15510314 15510604 -130078684 - L1MD1 LINE L1 0 6242 5932 2115 148 0 0 chr10 15510604 15510915 -130078373 + AluSx SINE Alu 1 311 -1 1701 160 87 47 chr10 15510915 15511005 -130078283 - L1MD1 LINE L1 -310 5932 5847 2224 117 3 3 chr10 15511416 15511715 -130077573 - AluSx SINE Alu -13 299 1 4111 104 30 69 chr10 15511842 15512513 -130076775 + L1PB4 LINE L1 5475 6118 -38 2094 108 44 0 chr10 15512513 15512809 -130076479 + AluSx SINE Alu 1 309 -3 4111 104 30 69 chr10 15512809 15512846 -130076442 + L1PB4 LINE L1 6118 6155 -1 2348 60 3 30 chr10 15512977 15513306 -130075982 + AluSp SINE Alu 15 313 0 2319 88 0 7 chr10 15513343 15513638 -130075650 + AluSx SINE Alu 11 303 -9 1687 196 129 39 chr10 15513638 15514071 -130075217 + MLT1E LTR MaLR 122 593 0 2324 101 0 13 chr10 15514139 15514446 -130074842 + AluSg SINE Alu 1 303 -7 2367 69 3 20 chr10 15514455 15514758 -130074530 + AluY SINE Alu 2 299 -12 21 36 0 0 chr10 15514765 15514793 -130074495 + AT_rich Low_complexity Low_complexity 1 28 0 2106 117 17 0 chr10 15514809 15515100 -130074188 + AluSx SINE Alu 2 297 -15 2248 102 7 10 chr10 15515910 15516213 -130073075 + AluSx SINE Alu 1 302 -10 1850 100 4 0 chr10 15516877 15517117 -130072171 + AluSg SINE Alu 62 302 -8 1820 166 13 3 chr10 15517613 15517921 -130071367 + AluJb SINE Alu 1 311 -1 2175 131 0 13 chr10 15517967 15518280 -130071008 - AluSg SINE Alu -1 309 1 800 160 15 0 chr10 15518506 15518637 -130070651 - FLAM_C SINE Alu 0 133 1 2145 122 3 7 chr10 15519060 15519355 -130069933 - AluSx SINE Alu -18 294 1 455 189 102 2 chr10 15519475 15519593 -130069695 - L1MC1 LINE L1 -6 6327 6207 2343 100 3 3 chr10 15519599 15519908 -130069380 - AluSq SINE Alu -4 309 1 2001 144 10 13 chr10 15520763 15521068 -130068220 - AluJo SINE Alu -8 304 1 204 343 14 0 chr10 15521303 15521376 -130067912 + L2 LINE L2 2530 2603 -711 1945 127 3 17 chr10 15521880 15522171 -130067117 + AluJb SINE Alu 1 287 -25 288 0 0 0 chr10 15522373 15522405 -130066883 + (TTG)n Simple_repeat Simple_repeat 2 33 0 489 177 5 48 chr10 15523041 15523133 -130066155 + GA-rich Low_complexity Low_complexity 3 85 -95 1960 101 26 4 chr10 15523133 15523400 -130065888 + AluSq SINE Alu 9 281 -32 489 177 5 48 chr10 15523400 15523493 -130065795 + GA-rich Low_complexity Low_complexity 85 180 0 218 256 0 0 chr10 15523493 15523536 -130065752 + polypurine Low_complexity Low_complexity 2 44 0 536 199 19 6 chr10 15523537 15523698 -130065590 + GA-rich Low_complexity Low_complexity 2 164 0 2209 138 0 0 chr10 15525179 15525491 -130063797 - AluSx SINE Alu 0 312 1 3431 54 42 2 chr10 15526044 15526431 -130062857 + MLT2A1 LTR ERVL 1 408 -36 459 52 0 0 chr10 15526431 15526489 -130062799 + (TCTA)n Simple_repeat Simple_repeat 3 60 0 3431 54 42 2 chr10 15526489 15526528 -130062760 + MLT2A1 LTR ERVL 408 444 0 423 0 0 0 chr10 15527044 15527091 -130062197 + (TA)n Simple_repeat Simple_repeat 1 47 0 204 40 0 0 chr10 15527305 15527330 -130061958 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 1767 127 4 4 chr10 15527336 15527604 -130061684 - AluJb SINE Alu -44 268 1 1027 163 0 0 chr10 15527696 15527862 -130061426 - FRAM SINE Alu 0 166 1 215 211 0 0 chr10 15528676 15528714 -130060574 + polypyrimidine Low_complexity Low_complexity 2 39 0 1545 156 31 21 chr10 15529461 15529750 -130059538 + AluJb SINE Alu 5 296 -16 197 329 61 12 chr10 15530200 15530282 -130059006 + L2 LINE L2 3187 3272 0 182 333 0 0 chr10 15530393 15530438 -130058850 - L2 LINE L2 -14 3299 3255 1776 139 24 17 chr10 15530756 15531044 -130058244 + AluJo SINE Alu 1 290 -22 3278 201 18 28 chr10 15531584 15531631 -130057657 + L1MB8 LINE L1 5444 5490 -688 2420 64 0 0 chr10 15531631 15531928 -130057360 + AluY SINE Alu 1 297 -14 3278 201 18 28 chr10 15531928 15532552 -130056736 + L1MB8 LINE L1 5490 6110 -68 2046 139 0 0 chr10 15532552 15532861 -130056427 - AluSx SINE Alu -3 309 1 3278 201 18 28 chr10 15532861 15532910 -130056378 + L1MB8 LINE L1 6110 6158 -20 897 241 120 34 chr10 15533581 15533971 -130055317 + MLT1J2 LTR MaLR 28 511 0 1765 156 6 16 chr10 15533992 15534307 -130054981 + AluJo SINE Alu 1 312 0 545 311 52 44 chr10 15534607 15534877 -130054411 + L1 LINE L1 4763 5034 -1112 384 280 70 10 chr10 15534878 15534978 -130054310 + L2 LINE L2 3208 3313 0 735 300 9 26 chr10 15535274 15535405 -130053883 + MIR SINE MIR 34 161 -101 1744 141 7 27 chr10 15535405 15535704 -130053584 + AluJo SINE Alu 1 293 -19 735 300 9 26 chr10 15535704 15535805 -130053483 + MIR SINE MIR 161 262 0 407 238 147 35 chr10 15535830 15535973 -130053315 + L2 LINE L2 3153 3311 -2 357 301 24 16 chr10 15535981 15536104 -130053184 + L1M LINE L1 5282 5405 -2403 2109 217 110 12 chr10 15536359 15538126 -130051162 + SATR1 Satellite Satellite 1 1938 -20 14958 89 12 18 chr10 15538126 15540182 -130049106 - HERVE LTR ERV1 -2648 5165 3122 320 309 12 0 chr10 15540588 15540672 -130048616 - L2 LINE L2 -8 3305 3221 1852 123 0 11 chr10 15540696 15540973 -130048315 + AluSx SINE Alu 1 274 -38 216 0 0 0 chr10 15540980 15541004 -130048284 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 2285 100 0 0 chr10 15541401 15541710 -130047578 + AluSx SINE Alu 2 310 -2 2062 90 0 61 chr10 15541961 15542273 -130047015 - AluSx SINE Alu -19 293 1 2185 71 3 7 chr10 15542632 15542926 -130046362 - AluSg SINE Alu -2 308 16 1605 186 86 19 chr10 15543120 15543481 -130045807 - MSTB LTR MaLR 0 426 42 195 259 19 0 chr10 15543775 15543829 -130045459 - MIR SINE MIR -72 136 82 25 0 0 0 chr10 15544026 15544051 -130045237 + AT_rich Low_complexity Low_complexity 1 25 0 1893 134 3 10 chr10 15544056 15544347 -130044941 + AluSq SINE Alu 1 289 -24 1400 151 23 19 chr10 15544349 15544608 -130044680 - AluJo SINE Alu -30 282 23 2017 131 0 6 chr10 15544639 15544951 -130044337 + AluSg SINE Alu 1 310 0 400 184 0 0 chr10 15545005 15545081 -130044207 + L1MEc LINE L1 2039 2114 -4282 2166 96 0 0 chr10 15545139 15545431 -130043857 + AluSx SINE Alu 1 292 -20 3172 83 2 2 chr10 15545839 15546246 -130043042 + THE1B-int LTR MaLR 1174 1580 0 2259 152 6 20 chr10 15546251 15546607 -130042681 + THE1B LTR MaLR 14 364 0 1480 195 0 20 chr10 15546781 15547078 -130042210 + AluJo SINE Alu 1 291 -21 2060 125 3 0 chr10 15547136 15547432 -130041856 + AluSq SINE Alu 1 297 -16 2987 53 24 0 chr10 15548478 15548853 -130040435 - L1PA7 LINE L1 -1 6153 5770 39 54 0 32 chr10 15549356 15549449 -130039839 + AT_rich Low_complexity Low_complexity 1 90 0 1860 130 0 17 chr10 15549793 15550093 -130039195 - AluJb SINE Alu -8 304 10 2082 106 0 0 chr10 15550112 15550404 -130038884 - AluSg SINE Alu -18 292 1 2075 127 0 0 chr10 15550825 15551125 -130038163 + AluSx SINE Alu 1 300 -12 3921 119 75 18 chr10 15551626 15552250 -130037038 + PABL_A LTR ERV1 1 660 0 432 187 13 0 chr10 15552457 15552532 -130036756 + MIR SINE MIR 15 90 -172 2179 94 13 0 chr10 15552533 15552831 -130036457 + AluSx SINE Alu 1 302 -10 2082 123 3 3 chr10 15553282 15553592 -130035696 + AluSx SINE Alu 1 310 -2 1883 138 10 7 chr10 15554019 15554310 -130034978 - AluSx SINE Alu -20 292 1 228 241 161 45 chr10 15554383 15554495 -130034793 - L2 LINE L2 -10 3262 3138 3715 89 109 42 chr10 15554944 15555538 -130033750 - MER51A LTR ERV1 0 634 1 2190 102 3 0 chr10 15556553 15556847 -130032441 + AluSx SINE Alu 1 295 -17 1812 141 0 17 chr10 15557121 15557259 -130032029 + AluJo SINE Alu 1 140 -172 2263 93 3 0 chr10 15557259 15557559 -130031729 + AluSp SINE Alu 1 301 -12 1812 141 0 17 chr10 15557559 15557719 -130031569 + AluJo SINE Alu 140 294 -18 444 251 263 6 chr10 15557745 15557924 -130031364 - MIR SINE MIR -15 247 23 1955 122 0 3 chr10 15558022 15558308 -130030980 + AluSx SINE Alu 1 285 -27 317 111 0 0 chr10 15558308 15558353 -130030935 + Alu SINE Alu 250 294 -6 994 128 0 87 chr10 15558353 15558549 -130030739 + AluSg/x SINE Alu 119 297 -13 381 253 78 60 chr10 15558549 15558818 -130030470 + L1ME4a LINE L1 5820 6093 -28 276 130 0 0 chr10 15559596 15559642 -130029646 + (GA)n Simple_repeat Simple_repeat 1 46 0 50 58 0 10 chr10 15559720 15559764 -130029524 + AT_rich Low_complexity Low_complexity 1 44 -58 2366 67 3 0 chr10 15559764 15560061 -130029227 + AluSp SINE Alu 1 298 -15 50 58 0 10 chr10 15560061 15560119 -130029169 + AT_rich Low_complexity Low_complexity 44 102 0 75 51 0 0 chr10 15560141 15560258 -130029030 + AT_rich Low_complexity Low_complexity 1 117 0 619 103 9 95 chr10 15560261 15560377 -130028911 - FLAM_C SINE Alu -11 132 27 1823 133 7 3 chr10 15561365 15561685 -130027603 + AluJb SINE Alu 1 321 0 350 203 0 13 chr10 15561693 15561772 -130027516 - L1 LINE L1 -1494 4652 4575 307 248 66 91 chr10 15561790 15561911 -130027377 - MER5B DNA MER1_type -6 172 55 198 48 24 48 chr10 15562136 15562178 -130027110 + (TTTTC)n Simple_repeat Simple_repeat 1 41 0 198 261 198 0 chr10 15562191 15562227 -130027061 + L2 LINE L2 2915 2943 -329 2121 129 0 0 chr10 15562227 15562536 -130026752 - AluSx SINE Alu -3 309 1 198 261 198 0 chr10 15562536 15562610 -130026678 + L2 LINE L2 2943 3047 -225 331 273 172 16 chr10 15562665 15562900 -130026388 + L2 LINE L2 2828 3127 -186 2183 123 0 0 chr10 15562900 15563209 -130026079 - AluSx SINE Alu -3 309 1 331 273 172 16 chr10 15563209 15563292 -130025996 + L2 LINE L2 3127 3196 -117 331 257 44 9 chr10 15563434 15563547 -130025741 + REP3 LTR ERV 9 125 -437 198 0 0 0 chr10 15563564 15563586 -130025702 + (T)n Simple_repeat Simple_repeat 1 22 0 266 254 71 154 chr10 15564142 15564453 -130024835 + REP3 LTR ERV 178 462 -100 408 20 0 0 chr10 15564644 15564693 -130024595 + (CA)n Simple_repeat Simple_repeat 2 50 0 357 125 0 0 chr10 15564954 15565010 -130024278 + (CAT)n Simple_repeat Simple_repeat 1 56 0 1068 136 0 0 chr10 15565011 15565187 -130024101 + (CACCAT)n Simple_repeat Simple_repeat 1 176 0 1045 232 52 40 chr10 15565206 15565456 -130023832 - MIR SINE MIR -9 253 1 228 225 25 12 chr10 15565478 15565558 -130023730 - L1M LINE L1 -2411 5397 5317 2173 94 7 0 chr10 15566640 15566937 -130022351 - AluSp SINE Alu -14 299 1 2238 102 0 3 chr10 15567323 15567627 -130021661 + AluSx SINE Alu 1 303 -9 229 284 30 0 chr10 15568288 15568355 -130020933 - MIR SINE MIR -68 140 72 459 271 25 13 chr10 15568431 15568599 -130020689 + L1MC/D LINE L1 5634 5810 -311 501 67 56 56 chr10 15568612 15568701 -130020587 - LTR9 LTR ERV1 -86 526 438 546 143 105 83 chr10 15568731 15568864 -130020424 + AluJo SINE Alu 1 136 -176 2219 49 7 14 chr10 15569213 15569531 -130019757 - AluY SINE Alu 0 316 1 233 256 138 59 chr10 15569546 15569800 -130019488 - MLT1J LTR MaLR -2 509 236 346 250 12 0 chr10 15570025 15570105 -130019183 - Tigger7 DNA MER2_type 0 2487 2407 1780 151 0 50 chr10 15570945 15571262 -130018026 - AluJo SINE Alu -11 301 1 2219 180 84 0 chr10 15571274 15571691 -130017597 - Tigger7 DNA MER2_type -273 460 9 2425 136 8 8 chr10 15571691 15572065 -130017223 + THE1C LTR MaLR 1 374 -1 2264 78 3 0 chr10 15572196 15572490 -130016798 + AluSg SINE Alu 1 295 -15 2160 99 3 3 chr10 15573612 15573915 -130015373 + AluSq SINE Alu 1 303 -10 728 127 42 35 chr10 15574269 15574411 -130014877 - MLT1A2 LTR MaLR 0 374 232 667 186 28 28 chr10 15574440 15574585 -130014703 - MLT1A2 LTR MaLR -214 151 7 1758 94 17 74 chr10 15574976 15575306 -130013982 - AluSx SINE Alu 0 314 2 1914 130 7 10 chr10 15776000 15776308 -129812980 - AluSx SINE Alu -5 307 1 1340 141 38 55 chr10 15776863 15777154 -129812134 + AluSx SINE Alu 1 286 -16 274 132 44 15 chr10 15777470 15777538 -129811750 + L1ME4a LINE L1 5990 6059 -62 549 250 98 27 chr10 15778206 15778380 -129810908 - MIR SINE MIR -29 233 44 1556 161 0 40 chr10 15778380 15778703 -129810585 - AluSx SINE Alu -2 310 1 1676 159 14 7 chr10 15779783 15780091 -129809197 + AluJb SINE Alu 1 312 0 434 306 8 8 chr10 15780308 15780429 -129808859 + MIR3 SINE MIR 41 161 -47 1782 113 32 68 chr10 15780706 15781015 -129808273 - AluSg SINE Alu -12 298 1 2131 115 3 3 chr10 15782304 15782608 -129806680 - AluSq SINE Alu -9 304 1 220 91 45 0 chr10 15783772 15783816 -129805472 + CT-rich Low_complexity Low_complexity 1 46 0 205 304 0 32 chr10 15783870 15783995 -129805293 + T-rich Low_complexity Low_complexity 4 124 0 225 181 14 28 chr10 15783999 15784071 -129805217 + CT-rich Low_complexity Low_complexity 2 72 0 331 262 36 95 chr10 15784184 15784405 -129804883 + L1ME LINE L1 780 987 -5083 2329 90 7 0 chr10 15786051 15786361 -129802927 - AluSq SINE Alu -1 312 1 209 277 0 0 chr10 15786716 15786763 -129802525 - MIR3 SINE MIR -50 158 112 1902 117 0 0 chr10 15788467 15788740 -129800548 - AluSx SINE Alu -1 311 39 327 250 28 40 chr10 15790033 15790209 -129799079 + (CCCCG)n Simple_repeat Simple_repeat 1 174 0 1594 161 28 7 chr10 15790542 15790833 -129798455 + AluJo SINE Alu 1 297 -15 217 270 32 0 chr10 15791560 15791623 -129797665 - L2 LINE L2 -4 3309 3245 706 168 90 0 chr10 15792228 15792383 -129796905 + MER53 DNA DNA 1 169 -20 1160 150 26 30 chr10 15792383 15792616 -129796672 - AluJo SINE Alu -16 296 65 261 178 53 12 chr10 15793111 15793192 -129796096 - AluJo SINE Alu -6 296 246 289 250 15 0 chr10 15793446 15793514 -129795774 - L2 LINE L2 -4 3309 3241 911 166 0 41 chr10 15793603 15793772 -129795516 - AluJo SINE Alu -64 248 87 365 252 50 36 chr10 15793772 15793911 -129795377 - MER5B DNA MER1_type -36 142 2 1912 127 7 3 chr10 15794367 15794651 -129794637 - AluSx SINE Alu -27 285 1 280 263 222 10 chr10 15794872 15794971 -129794317 + MER5A DNA MER1_type 47 166 -23 2707 204 93 30 chr10 15796697 15796827 -129792461 + L1MC3 LINE L1 6994 7114 -671 2229 123 33 36 chr10 15796827 15797192 -129792096 + THE1B LTR MaLR 1 364 0 2707 204 93 30 chr10 15797192 15797806 -129791482 + L1MC3 LINE L1 7114 7785 0 1920 106 31 10 chr10 15797900 15798192 -129791096 + AluSx SINE Alu 1 298 -14 2047 108 3 7 chr10 15798970 15799265 -129790023 - AluSx SINE Alu -13 299 6 353 173 28 123 chr10 15799275 15799481 -129789807 - AluSg SINE Alu -132 168 1 1613 80 13 0 chr10 15799802 15800027 -129789261 + AluSq SINE Alu 86 313 0 182 207 35 86 chr10 15800100 15800158 -129789130 - MER5C DNA MER1_type -267 57 3 385 281 74 7 chr10 15800588 15800723 -129788565 + MIR SINE MIR 7 150 -112 244 86 0 0 chr10 15801868 15801903 -129787385 - AluSx SINE Alu -6 294 260 1500 111 13 9 chr10 15801906 15802132 -129787156 - AluSx SINE Alu -85 227 1 1777 145 11 0 chr10 15803208 15803490 -129785798 + AluJb SINE Alu 3 287 -25 1103 107 0 0 chr10 15803746 15803895 -129785393 + AluSq/x SINE Alu 1 149 -163 441 62 0 62 chr10 15804026 15804117 -129785171 - AluSp/q SINE Alu 0 313 233 874 130 0 0 chr10 15804119 15804250 -129785038 + AluSg/x SINE Alu 170 300 -10 1595 151 34 31 chr10 15804606 15804898 -129784390 + AluJo SINE Alu 3 295 -17 2236 98 3 3 chr10 15805041 15805348 -129783940 - AluSq SINE Alu -6 307 1 180 266 101 25 chr10 15805638 15805717 -129783571 - L3 LINE CR1 -60 1517 1433 2112 107 0 3 chr10 15806046 15806344 -129782944 + AluSx SINE Alu 2 298 -14 1472 181 41 0 chr10 15807022 15807315 -129781973 - AluJo SINE Alu -7 305 1 402 174 0 47 chr10 15807583 15807669 -129781619 - MER74A LTR ERVL 0 558 477 1903 114 24 10 chr10 15807673 15807963 -129781325 + AluSx SINE Alu 1 294 -18 2051 200 37 29 chr10 15807999 15808483 -129780805 - MER74A LTR ERVL -70 488 1 195 259 17 35 chr10 15808542 15808600 -129780688 + MIR3 SINE MIR 119 175 -33 46 45 0 0 chr10 15809429 15809496 -129779792 + AT_rich Low_complexity Low_complexity 1 67 0 2271 86 0 0 chr10 15809511 15809803 -129779485 - AluSq SINE Alu -21 292 1 994 119 11 11 chr10 15810214 15810390 -129778898 - AluSq SINE Alu 0 313 138 3914 93 6 4 chr10 15810556 15811102 -129778186 - L1PB1 LINE L1 -4 6147 5601 917 84 8 0 chr10 15811102 15811226 -129778062 - L1PB1 LINE L1 -1 6150 6019 2293 103 3 0 chr10 15811594 15811906 -129777382 - AluSp SINE Alu 0 313 1 892 189 60 27 chr10 15812490 15812734 -129776554 + MER58B DNA MER1_type 1 327 -14 1942 101 41 0 chr10 15812743 15813011 -129776277 + AluSg SINE Alu 12 290 -20 392 299 143 24 chr10 15813337 15813588 -129775700 - L2 LINE L2 -75 3238 2958 1457 153 4 0 chr10 15813705 15813934 -129775354 - AluJb SINE Alu -82 230 1 254 299 77 60 chr10 15813960 15814077 -129775211 + L2 LINE L2 3151 3269 -3 767 263 10 24 chr10 15814108 15814317 -129774971 - MER3 DNA MER1_type -3 206 1 187 202 107 24 chr10 15814441 15814525 -129774763 + L2 LINE L2 2779 2869 -445 228 290 43 65 chr10 15814575 15814713 -129774575 + L2 LINE L2 2935 3069 -244 1583 189 96 6 chr10 15814744 15815077 -129774211 - MLT1A1 LTR MaLR 0 365 3 342 243 28 117 chr10 15815079 15815265 -129774023 - L1MC5 LINE L1 -62 7899 7751 1549 179 0 17 chr10 15815265 15815566 -129773722 - AluJb SINE Alu -11 301 6 342 243 28 117 chr10 15815566 15815696 -129773592 - L1MC5 LINE L1 -210 7751 7611 344 288 70 62 chr10 15815730 15815987 -129773301 + L2 LINE L2 3051 3309 -4 280 373 0 52 chr10 15816150 15816284 -129773004 - L2 LINE L2 -10 3262 3136 25 0 0 0 chr10 15816332 15816357 -129772931 + AT_rich Low_complexity Low_complexity 1 25 0 240 307 79 74 chr10 15816683 15816872 -129772416 + LTR67 LTR ERVL 102 291 -266 348 209 191 0 chr10 15816903 15817013 -129772275 + LTR67 LTR ERVL 404 534 -23 2226 78 0 66 chr10 15817689 15818023 -129771265 - AluSq SINE Alu -1 312 1 23 0 0 0 chr10 15819071 15819094 -129770194 + AT_rich Low_complexity Low_complexity 1 23 0 2075 129 0 3 chr10 15819841 15820144 -129769144 - AluSx SINE Alu -10 302 1 2013 117 3 25 chr10 15820903 15821220 -129768068 - AluSq SINE Alu -3 310 1 21 36 0 0 chr10 15821324 15821352 -129767936 + AT_rich Low_complexity Low_complexity 1 28 0 2067 120 7 0 chr10 15821704 15822005 -129767283 - AluSx SINE Alu -9 303 1 21 36 0 0 chr10 15822455 15822483 -129766805 + AT_rich Low_complexity Low_complexity 1 28 0 1914 80 65 0 chr10 15822484 15822775 -129766513 + AluY SINE Alu 1 308 0 211 365 29 36 chr10 15823063 15823200 -129766088 + MIR SINE MIR 13 148 -114 234 293 57 50 chr10 15823517 15823657 -129765631 + MIR SINE MIR 122 262 0 1707 219 15 55 chr10 15823866 15823966 -129765322 + LTR40b LTR ERVL 3 105 -357 1711 112 3 93 chr10 15823966 15824289 -129764999 - AluSq SINE Alu -19 294 1 1707 219 15 55 chr10 15824289 15824663 -129764625 + LTR40b LTR ERVL 105 458 -4 1163 86 6 12 chr10 15824968 15825130 -129764158 + AluSq SINE Alu 1 161 -152 334 48 0 0 chr10 15825249 15825291 -129763997 - AluY SINE Alu -260 42 1 408 335 11 28 chr10 15825623 15825799 -129763489 - L3 LINE CR1 -156 1421 1249 518 188 0 118 chr10 15827341 15827485 -129761803 - L1ME1 LINE L1 0 6164 6038 256 264 184 75 chr10 15827531 15827705 -129761583 + MIR SINE MIR 30 222 -40 265 240 145 68 chr10 15828164 15828385 -129760903 - L1ME4a LINE L1 -46 6075 5838 527 338 26 22 chr10 15828962 15829190 -129760098 + L1MC/D LINE L1 5435 5663 -2145 2036 122 3 13 chr10 15829680 15829992 -129759296 - AluSg SINE Alu -1 309 1 23 0 0 0 chr10 15830065 15830088 -129759200 + AT_rich Low_complexity Low_complexity 1 23 0 1925 117 3 14 chr10 15830103 15830393 -129758895 - AluJo SINE Alu -25 287 1 682 81 0 0 chr10 15831611 15831710 -129757578 + L1PB2 LINE L1 5925 6023 -128 2033 135 0 0 chr10 15831729 15832032 -129757256 - AluSx SINE Alu -9 303 1 5237 118 28 14 chr10 15832257 15833067 -129756221 - L1PA15 LINE L1 0 6165 5344 2004 128 7 0 chr10 15835158 15835455 -129753833 + AluSx SINE Alu 1 299 -13 2157 100 0 31 chr10 15835473 15835793 -129753495 + AluSg SINE Alu 1 310 0 1607 168 0 39 chr10 15837520 15837829 -129751459 + AluJb SINE Alu 6 302 -10 2093 117 3 0 chr10 15838616 15838915 -129750373 - AluSx SINE Alu -12 300 1 1834 162 0 3 chr10 15838928 15839230 -129750058 - AluSx SINE Alu -11 301 1 509 239 244 38 chr10 15839431 15839644 -129749644 + MIR SINE MIR 6 262 0 1824 157 0 3 chr10 15839669 15839968 -129749320 + AluJb SINE Alu 1 298 -14 1596 128 0 33 chr10 15839981 15840254 -129749034 + L1PA15 LINE L1 5902 6165 0 2129 86 0 20 chr10 15840445 15840748 -129748540 - AluSq SINE Alu -16 297 1 1331 180 90 14 chr10 15841669 15841947 -129747341 + AluJb SINE Alu 2 300 -12 389 290 91 39 chr10 15842023 15842254 -129747034 + MLT1K LTR MaLR 332 574 -14 1936 114 11 0 chr10 15842361 15842633 -129746655 + AluSx SINE Alu 1 275 -37 1243 124 0 0 chr10 15843009 15843186 -129746102 - AluSg/x SINE Alu -2 310 134 2232 99 3 3 chr10 15843186 15843490 -129745798 - AluSx SINE Alu -8 304 1 292 276 29 67 chr10 15843578 15843683 -129745605 - MIR SINE MIR -70 138 38 203 182 0 0 chr10 15844029 15844062 -129745226 + (TATATG)n Simple_repeat Simple_repeat 2 34 0 371 311 0 0 chr10 15844062 15844152 -129745136 + L1MC4 LINE L1 6614 6703 -1339 344 265 24 12 chr10 15844126 15844209 -129745079 + L1MCa LINE L1 1995 2078 -4348 * 1913 116 0 20 chr10 15844264 15844557 -129744731 - AluSx SINE Alu -25 287 1 2144 103 0 20 chr10 15845514 15845816 -129743472 + AluSx SINE Alu 1 296 -16 1548 159 12 40 chr10 15845849 15846170 -129743118 + AluJb SINE Alu 1 312 0 1890 130 0 14 chr10 15847262 15847592 -129741696 + AluJb SINE Alu 1 312 0 1485 170 62 7 chr10 15849194 15849483 -129739805 - AluJo SINE Alu -7 305 1 209 277 117 36 chr10 15849718 15849855 -129739433 + L2 LINE L2 2625 2772 -542 475 255 83 2 chr10 15849984 15850152 -129739136 - MIR SINE MIR -57 151 3 1874 151 0 19 chr10 15850230 15850541 -129738747 - AluJb SINE Alu -7 305 1 239 273 107 33 chr10 15850832 15850953 -129738335 + MIR SINE MIR 112 241 -21 926 179 114 25 chr10 15851128 15851329 -129737959 - MER20 DNA MER1_type 0 219 1 208 281 0 0 chr10 15851460 15851524 -129737764 + CT-rich Low_complexity Low_complexity 1 64 0 1446 196 14 4 chr10 15852250 15852525 -129736763 + AluJo SINE Alu 1 278 -34 192 316 75 30 chr10 15852595 15852728 -129736560 - L2 LINE L2 -581 2733 2595 1161 44 17 17 chr10 15854091 15854140 -129735148 + (TCTA)n Simple_repeat Simple_repeat 1 229 0 1161 44 17 17 chr10 15854140 15854320 -129734968 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 1597 144 34 45 chr10 15854404 15854696 -129734592 - AluJo SINE Alu -23 289 1 1392 179 19 0 chr10 15854944 15855212 -129734076 + AluJb SINE Alu 28 300 -12 321 68 0 0 chr10 15855657 15855701 -129733587 + (TG)n Simple_repeat Simple_repeat 2 45 0 1250 211 4 8 chr10 15855746 15855993 -129733295 + AluJb SINE Alu 1 246 -66 234 0 0 0 chr10 15855993 15856019 -129733269 + (A)n Simple_repeat Simple_repeat 1 26 0 230 343 68 41 chr10 15856094 15856240 -129733048 - L2 LINE L2 0 3272 3123 1777 158 7 10 chr10 15856998 15857301 -129731987 + AluJb SINE Alu 1 302 -10 2216 107 0 0 chr10 15857737 15858046 -129731242 + AluSc SINE Alu 1 309 0 492 304 242 29 chr10 15858557 15859172 -129730116 - L2 LINE L2 -479 2835 2090 1839 115 41 0 chr10 15859181 15859487 -129729801 + AluSx SINE Alu 1 317 0 1634 186 0 16 chr10 15859516 15859833 -129729455 - AluJb SINE Alu 0 312 1 37584 70 10 5 chr10 15860342 15865229 -129724059 + L1PA5 LINE L1 11 4919 -1227 3660 50 0 0 chr10 15865229 15865666 -129723622 + L1PA5 LINE L1 5703 6141 -13 2011 112 0 34 chr10 15865703 15865999 -129723289 - AluSx SINE Alu -14 298 13 668 165 46 57 chr10 15866044 15866238 -129723050 + L1MA7 LINE L1 6098 6289 -2 2075 116 7 0 chr10 15866591 15866893 -129722395 - AluSg SINE Alu -6 304 1 1577 198 0 7 chr10 15867098 15867401 -129721887 - AluJo SINE Alu -11 301 1 671 193 91 136 chr10 15867519 15867644 -129721644 - MIR SINE MIR 0 262 154 2002 109 0 24 chr10 15867644 15867938 -129721350 - AluSq SINE Alu -25 288 2 671 193 91 136 chr10 15867938 15868077 -129721211 - MIR SINE MIR -108 154 10 1898 135 3 0 chr10 15868180 15868469 -129720819 - AluSq SINE Alu -21 292 3 2423 198 20 10 chr10 15868745 15869234 -129720054 + L1MB7 LINE L1 5573 6066 -118 200 343 20 49 chr10 15869951 15870053 -129719235 - L2 LINE L2 -186 3086 2988 1757 123 0 0 chr10 15870053 15870297 -129718991 + AluSc SINE Alu 1 244 -65 254 28 0 28 chr10 15870311 15870347 -129718941 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 1179 128 0 17 chr10 15870347 15870527 -129718761 + AluSg/x SINE Alu 128 304 -8 2501 138 57 2 chr10 15871334 15871740 -129717548 + MSTA LTR MaLR 1 428 0 194 369 60 7 chr10 15871786 15871935 -129717353 - MIR3 SINE MIR -22 186 30 2059 120 10 0 chr10 15871995 15872296 -129716992 + AluSx SINE Alu 1 304 -8 337 221 0 0 chr10 15872374 15872442 -129716846 - MER82 DNA MER2_type -9 644 577 804 172 13 0 chr10 15872488 15872639 -129716649 - AluSg/x SINE Alu -4 306 154 1948 171 32 16 chr10 15872640 15873009 -129716279 - MER82 DNA MER2_type -278 375 1 572 137 0 20 chr10 15873113 15873215 -129716073 - AluJb SINE Alu 0 312 213 312 298 62 39 chr10 15873333 15873511 -129715777 + L2 LINE L2 2222 2403 -911 183 42 0 0 chr10 15873555 15873579 -129715709 + (GGGA)n Simple_repeat Simple_repeat 3 26 0 1245 199 0 15 chr10 15873988 15874254 -129715034 - AluJo SINE Alu 0 312 51 198 0 0 0 chr10 15874837 15874859 -129714429 + (TG)n Simple_repeat Simple_repeat 2 23 0 1520 161 40 4 chr10 15874859 15875132 -129714156 - AluJo SINE Alu -27 285 3 635 320 86 28 chr10 15875565 15875944 -129713344 - L2 LINE L2 -285 2987 2590 520 276 0 0 chr10 15876371 15876487 -129712801 + MIR SINE MIR 51 166 -96 1970 133 0 3 chr10 15876699 15877001 -129712287 - AluSq SINE Alu -12 301 1 2310 81 3 3 chr10 15877500 15877810 -129711478 - AluY SINE Alu -1 310 1 1624 80 0 61 chr10 15877812 15878124 -129711164 - AluSc SINE Alu -16 293 1 2301 82 3 3 chr10 15879326 15879631 -129709657 + AluSc SINE Alu 1 305 -4 2033 120 0 3 chr10 15879749 15880049 -129709239 - AluSx SINE Alu -13 299 1 918 75 0 0 chr10 15880088 15880208 -129709080 - AluJb SINE Alu -192 120 1 419 235 197 0 chr10 15880396 15880528 -129708760 + MER5A DNA MER1_type 14 171 -18 2211 96 0 13 chr10 15882099 15882411 -129706877 - AluY SINE Alu -3 308 1 1926 127 20 13 chr10 15882413 15882713 -129706575 - AluSx SINE Alu -10 302 1 197 343 67 62 chr10 15882716 15882926 -129706362 + L2 LINE L2 2976 3186 -86 966 82 0 0 chr10 15883338 15883484 -129705804 + (TGGA)n Simple_repeat Simple_repeat 3 148 0 1050 231 9 4 chr10 15883542 15883771 -129705517 + AluJo SINE Alu 1 230 -82 260 54 54 0 chr10 15883771 15883808 -129705480 + AluSx SINE Alu 96 134 -168 1068 130 6 40 chr10 15883840 15884017 -129705271 + AluSx SINE Alu 118 288 -22 28 0 0 0 chr10 15884022 15884050 -129705238 + AT_rich Low_complexity Low_complexity 1 28 0 1959 141 0 0 chr10 15885984 15886274 -129703014 + AluSx SINE Alu 1 290 -22 1728 150 42 0 chr10 15886859 15887145 -129702143 - AluJb SINE Alu -14 298 1 1963 122 26 16 chr10 15887208 15887512 -129701776 + AluSx SINE Alu 3 309 -3 306 295 0 0 chr10 15887635 15887713 -129701575 + (CA)n Simple_repeat Simple_repeat 2 79 0 326 215 29 27 chr10 15887961 15888038 -129701250 - L1MCa LINE L1 -1339 6983 2005 1886 226 46 83 chr10 15888040 15888466 -129700822 + L1ME2 LINE L1 5461 5901 -263 2077 113 7 0 chr10 15888466 15888767 -129700521 + AluSx SINE Alu 8 310 -2 2029 91 0 14 chr10 15888767 15889093 -129700195 + AluSx SINE Alu 1 322 0 1886 226 46 83 chr10 15889093 15889375 -129699913 + L1ME2 LINE L1 5899 6145 -19 239 249 44 105 chr10 15889424 15889653 -129699635 + L1MC4 LINE L1 7826 8040 -2 1840 151 0 0 chr10 15889752 15890043 -129699245 - AluJo SINE Alu -18 294 4 479 281 67 17 chr10 15890710 15890888 -129698400 + MIR SINE MIR 66 252 -10 1502 240 170 29 chr10 15891318 15891697 -129697591 + MLT1E2 LTR MaLR 4 486 -140 1443 215 11 4 chr10 15891697 15892001 -129697287 - AluJb SINE Alu 0 308 3 1502 240 170 29 chr10 15892001 15892166 -129697122 + MLT1E2 LTR MaLR 486 626 0 457 370 14 51 chr10 15892470 15892746 -129696542 - L3 LINE CR1 -463 1114 849 27 62 0 0 chr10 15892860 15892908 -129696380 + AT_rich Low_complexity Low_complexity 1 48 0 2024 112 0 0 chr10 15893186 15893462 -129695826 + AluSx SINE Alu 16 291 -21 1957 99 0 58 chr10 15894204 15894516 -129694772 + AluSx SINE Alu 11 304 -8 2491 160 42 43 chr10 15896327 15896833 -129692455 - MLT1D LTR MaLR 0 505 1 215 337 42 11 chr10 15896850 15896945 -129692343 + MIR3 SINE MIR 94 191 -17 1919 146 10 0 chr10 15897259 15897561 -129691727 + AluSx SINE Alu 1 305 -7 2057 123 3 0 chr10 15897897 15898190 -129691098 - AluSq SINE Alu -19 294 1 22 0 0 0 chr10 15898565 15898587 -129690701 + AT_rich Low_complexity Low_complexity 1 22 0 2202 78 0 3 chr10 15898687 15899005 -129690283 + AluY SINE Alu 1 317 0 212 59 29 0 chr10 15900971 15901005 -129688283 + (TA)n Simple_repeat Simple_repeat 1 35 0 213 39 0 0 chr10 15902006 15902032 -129687256 + (T)n Simple_repeat Simple_repeat 1 26 0 22 35 0 0 chr10 15903133 15903162 -129686126 + GC_rich Low_complexity Low_complexity 1 29 0 1951 176 127 9 chr10 15903557 15903990 -129685298 - MER31A LTR ERV1 0 485 2 577 251 23 41 chr10 15903991 15904162 -129685126 - MIR SINE MIR -78 184 17 1935 143 0 13 chr10 15904178 15904493 -129684795 + AluSx SINE Alu 1 311 -1 409 246 45 18 chr10 15905111 15905221 -129684067 - MIR SINE MIR -79 183 71 774 217 37 0 chr10 15905314 15905503 -129683785 + L1MD3 LINE L1 7799 7994 -1 1480 71 20 20 chr10 15905657 15905854 -129683434 - MER107 DNA MER1_type 0 197 1 198 103 0 0 chr10 15906521 15906550 -129682738 + (A)n Simple_repeat Simple_repeat 1 29 0 2292 93 3 0 chr10 15906685 15906986 -129682302 - AluSp SINE Alu -11 302 1 2259 90 7 7 chr10 15907481 15907791 -129681497 - AluSx SINE Alu -2 310 1 2132 128 0 3 chr10 15908139 15908451 -129680837 - AluSx SINE Alu -1 311 1 231 103 0 0 chr10 15908604 15908643 -129680645 + (T)n Simple_repeat Simple_repeat 1 39 0 1544 183 10 17 chr10 15909130 15909420 -129679868 - AluJo SINE Alu -24 288 1 23 0 0 0 chr10 15909577 15909600 -129679688 + AT_rich Low_complexity Low_complexity 1 23 0 1543 174 31 7 chr10 15910026 15910313 -129678975 - AluJo SINE Alu -16 296 3 1854 143 3 7 chr10 15910593 15910894 -129678394 - AluSx SINE Alu -12 300 1 2131 103 3 16 chr10 15911368 15911678 -129677610 - AluSx SINE Alu -6 306 1 1326 164 0 91 chr10 15912044 15912342 -129676946 + AluJo SINE Alu 38 308 -4 590 264 70 70 chr10 15912346 15912588 -129676700 + L2 LINE L2 3050 3291 -22 1192 176 5 0 chr10 15912661 15912877 -129676411 + AluJo SINE Alu 75 291 -21 1656 138 8 4 chr10 15913538 15913798 -129675490 + AluJo SINE Alu 15 275 -37 1914 130 7 10 chr10 15913972 15914280 -129675008 - AluSx SINE Alu -5 307 1 2075 120 0 7 chr10 15914835 15915136 -129674152 + AluSx SINE Alu 1 299 -13 2398 71 3 0 chr10 15915306 15915615 -129673673 - AluY SINE Alu -1 310 1 1126 277 108 42 chr10 15915975 15916505 -129672783 + MLT1K LTR MaLR 2 566 -22 1400 168 0 4 chr10 15916705 15916943 -129672345 + AluJo SINE Alu 1 237 -75 1557 124 81 42 chr10 15917148 15917431 -129671857 - AluJb SINE Alu -18 294 1 1696 138 7 21 chr10 15918402 15918692 -129670596 + AluJo SINE Alu 9 294 -18 930 175 12 6 chr10 15919368 15919528 -129669760 + FRAM SINE Alu 5 165 -1 1510 169 4 4 chr10 15919675 15919935 -129669353 + AluJb SINE Alu 1 260 -52 2042 100 0 17 chr10 15920120 15920451 -129668837 - AluSq SINE Alu 0 326 1 228 203 101 38 chr10 15920557 15920636 -129668652 + MIR SINE MIR 63 146 -116 889 230 0 0 chr10 15920636 15920801 -129668487 + FAM SINE Alu 1 165 -10 1953 120 0 17 chr10 15920801 15921102 -129668186 - AluSx SINE Alu -16 296 1 371 174 90 35 chr10 15921103 15921228 -129668060 - MER106B DNA MER1_type -96 963 6 1586 132 0 97 chr10 15921392 15921703 -129667585 + AluJb SINE Alu 2 282 -30 893 9 0 9 chr10 15921704 15921811 -129667477 + (TAGA)n Simple_repeat Simple_repeat 4 109 0 954 228 19 14 chr10 15922010 15922035 -129667253 - MLT2C1 LTR ERVL -156 258 235 2439 62 3 0 chr10 15922035 15922339 -129666949 - AluY SINE Alu -6 305 1 954 228 19 14 chr10 15922339 15922564 -129666724 - MLT2C1 LTR ERVL -179 235 4 2860 211 37 31 chr10 15922564 15922866 -129666422 - ERVL LTR ERVL -4 5650 5351 1681 150 50 7 chr10 15922866 15923166 -129666122 + AluSq SINE Alu 1 313 0 2860 211 37 31 chr10 15923166 15923660 -129665628 - ERVL LTR ERVL -303 5351 4881 673 255 55 0 chr10 15923652 15923797 -129665491 + HERV16 LTR ERVL 536 688 -4308 * 2169 101 3 0 chr10 15924030 15924326 -129664962 - AluSx SINE Alu -15 297 1 186 143 0 0 chr10 15924564 15924599 -129664689 + (TTC)n Simple_repeat Simple_repeat 2 36 0 793 108 63 1 chr10 15924648 15924783 -129664505 - L1PA8 LINE L1 -269 5897 5751 27 49 0 0 chr10 15924884 15924925 -129664363 + AT_rich Low_complexity Low_complexity 1 41 0 819 191 13 0 chr10 15925789 15925941 -129663347 - AluY SINE Alu -23 288 135 363 261 53 100 chr10 15925999 15926379 -129662909 + L1ME4a LINE L1 5728 6089 -32 1578 170 40 0 chr10 15926451 15926728 -129662560 + AluJb SINE Alu 1 288 -24 243 0 0 0 chr10 15926736 15926763 -129662525 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 451 347 63 8 chr10 15927004 15927243 -129662045 + L1ME1 LINE L1 5355 5606 -515 415 259 113 18 chr10 15927336 15927591 -129661697 + L1ME1 LINE L1 5679 5946 -224 251 174 0 0 chr10 15927598 15927644 -129661644 - MLT2C1 LTR ERVL -7 390 345 1392 204 142 50 chr10 15927671 15928108 -129661180 - MLT2B1 LTR ERVL -43 477 1 261 0 0 0 chr10 15928117 15928159 -129661129 + (TG)n Simple_repeat Simple_repeat 1 71 0 261 0 0 0 chr10 15928159 15928188 -129661100 + (TG)n Simple_repeat Simple_repeat 2 30 0 1808 114 33 0 chr10 15928397 15928670 -129660618 + AluSg SINE Alu 1 282 -28 463 174 29 0 chr10 15928601 15928670 -129660618 + AluSg/x SINE Alu 211 330 0 402 0 20 0 chr10 15928670 15928719 -129660569 + (TAA)n Simple_repeat Simple_repeat 2 180 0 308 183 28 28 chr10 15928810 15928881 -129660407 + L1ME4a LINE L1 6047 6117 -4 2032 128 30 0 chr10 15929300 15929597 -129659691 + AluY SINE Alu 1 306 -5 207 0 0 0 chr10 15929751 15929774 -129659514 + (TC)n Simple_repeat Simple_repeat 2 24 0 258 32 0 0 chr10 15929776 15929807 -129659481 + (CA)n Simple_repeat Simple_repeat 1 31 0 16409 165 40 19 chr10 15929836 15932363 -129656925 + L1MA2 LINE L1 15 2487 -5236 2724 129 0 17 chr10 15932363 15932775 -129656513 + L1PA13 LINE L1 5759 6163 0 16409 165 40 19 chr10 15932775 15934706 -129654582 + L1MA2 LINE L1 2487 4376 -3347 2498 69 0 0 chr10 15934706 15935010 -129654278 - AluY SINE Alu -7 304 1 16409 165 40 19 chr10 15935010 15937747 -129651541 + L1MA2 LINE L1 4376 7723 0 244 236 18 0 chr10 15938089 15938144 -129651144 - L1MEd LINE L1 -5473 646 591 322 232 80 73 chr10 15938465 15938616 -129650672 - L1MEd LINE L1 -5966 153 2 339 363 66 6 chr10 15939132 15939314 -129649974 + MIR3 SINE MIR 15 207 -1 2219 93 3 7 chr10 15939474 15939765 -129649523 - AluSg SINE Alu -20 290 1 1464 155 0 74 chr10 15939848 15940119 -129649169 - AluJo SINE Alu -27 285 35 223 325 25 12 chr10 15940146 15940226 -129649062 - L2 LINE L2 -2 3311 3231 244 224 34 22 chr10 15940642 15940775 -129648513 + MIR SINE MIR 2 185 -77 1921 215 24 19 chr10 15941065 15941563 -129647725 + L1P LINE L1 4793 5293 -858 207 0 0 0 chr10 15941706 15941729 -129647559 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 829 250 2 9 chr10 15941729 15941929 -129647359 - L1PB4 LINE L1 -14 6142 5944 2338 106 0 0 chr10 15941929 15942232 -129647056 + AluSx SINE Alu 2 304 -8 1786 117 92 7 chr10 15943673 15943955 -129645333 + AluSx SINE Alu 7 312 0 2161 186 5 18 chr10 15944318 15944710 -129644578 - MLT1B LTR MaLR -2 388 2 2361 92 0 16 chr10 15944720 15945025 -129644263 + AluSx SINE Alu 1 300 -12 275 350 51 0 chr10 15945066 15945183 -129644105 - MIR3 SINE MIR -7 201 79 3264 106 34 61 chr10 15945871 15945917 -129643371 - MER75 DNA T2_type 0 514 468 2151 137 3 13 chr10 15945917 15945936 -129643352 - AluSx SINE Alu 0 312 294 180 0 0 0 chr10 15945936 15945956 -129643332 + (TA)n Simple_repeat Simple_repeat 1 20 0 2151 137 3 13 chr10 15945956 15946251 -129643037 - AluSx SINE Alu -18 294 1 3264 106 34 61 chr10 15946251 15946340 -129642948 - MER75 DNA T2_type -46 468 378 2355 81 7 13 chr10 15946340 15946648 -129642640 + AluSq SINE Alu 1 306 -7 3264 106 34 61 chr10 15946648 15947038 -129642250 - MER75 DNA T2_type -136 378 2 569 274 81 38 chr10 15947822 15948191 -129641097 + L1ME LINE L1 1324 1708 -4688 * 1962 263 52 61 chr10 15948190 15948502 -129640786 + L1ME LINE L1 3281 3594 -2621 2304 86 3 3 chr10 15948502 15948803 -129640485 + AluY SINE Alu 1 301 -10 1962 263 52 61 chr10 15948803 15949537 -129639751 + L1ME LINE L1 3594 4318 -1897 275 180 40 0 chr10 15949692 15949742 -129639546 - AluJb SINE Alu -10 292 241 2276 130 54 25 chr10 15949742 15950096 -129639192 + THE1B LTR MaLR 1 364 0 1454 171 0 28 chr10 15950096 15950348 -129638940 - AluJb SINE Alu -67 245 1 665 258 45 93 chr10 15950415 15950791 -129638497 + L1ME LINE L1 5334 5691 -542 3618 178 13 5 chr10 15951653 15952253 -129637035 + MER6A DNA MER2_type 1 605 0 1473 179 0 37 chr10 15952496 15952769 -129636519 - AluJb SINE Alu -49 263 1 1042 176 24 4 chr10 15953222 15953504 -129635784 + L1MB4 LINE L1 5175 5468 -712 3738 63 0 0 chr10 15953504 15953948 -129635340 - L1PA7 LINE L1 -2 6152 5709 3616 162 36 40 chr10 15953948 15954671 -129634617 + L1MB4 LINE L1 5460 6180 0 266 241 36 0 chr10 15954882 15954965 -129634323 - MER114 LTR ERV 0 648 563 676 181 52 0 chr10 15954968 15955084 -129634204 + FLAM_A SINE Alu 13 134 -8 1375 174 103 116 chr10 15955086 15955282 -129634006 - MER114 LTR ERV -88 560 363 1694 174 14 7 chr10 15955282 15955569 -129633719 + AluJb SINE Alu 1 289 -23 1375 174 103 116 chr10 15955569 15955935 -129633353 - MER114 LTR ERV -285 363 5 25 65 0 0 chr10 15955979 15956025 -129633263 + AT_rich Low_complexity Low_complexity 1 46 0 577 145 0 0 chr10 15956094 15956177 -129633111 + AluSg/x SINE Alu 213 295 -15 22 35 0 0 chr10 15956350 15956379 -129632909 + AT_rich Low_complexity Low_complexity 1 29 0 1772 109 8 19 chr10 15956385 15956651 -129632637 - AluSg SINE Alu -11 299 37 228 167 21 42 chr10 15956655 15956703 -129632585 - MER94 DNA DNA -87 47 1 553 260 12 24 chr10 15956704 15956873 -129632415 + L1ME LINE L1 5685 5851 -380 215 179 0 0 chr10 15956873 15956912 -129632376 + MER5B DNA MER1_type 9 47 -131 4764 107 283 108 chr10 15956947 15958405 -129630883 - pTR5 LTR ERV1 0 2438 62 544 108 0 0 chr10 15959082 15959156 -129630132 - MADE1 DNA Mariner -1 79 6 389 250 164 0 chr10 15959368 15959484 -129629804 - MER63 DNA MER1_type -300 762 2 332 329 82 18 chr10 15960558 15960777 -129628511 - L1MC4a LINE L1 -255 5915 5683 2909 0 0 0 chr10 15960854 15961161 -129628127 + AluYa5 SINE Alu 1 307 -4 2108 118 3 22 chr10 15961346 15961660 -129627628 - AluSx SINE Alu -4 308 1 2361 60 0 0 chr10 15961670 15962101 -129627187 - AluY SINE Alu 0 431 1 2057 134 0 0 chr10 15962230 15962513 -129626775 + AluSx SINE Alu 1 283 -29 306 301 55 41 chr10 15962538 15962684 -129626604 - L1MC4a LINE L1 -518 5646 5499 1076 220 123 82 chr10 15962702 15962891 -129626397 - L1MC5 LINE L1 -38 7923 7743 1828 174 10 3 chr10 15962891 15963189 -129626099 - AluJb SINE Alu -11 301 2 1076 220 123 82 chr10 15963189 15963477 -129625811 - L1MC5 LINE L1 -218 7743 7413 3661 115 11 46 chr10 15963477 15963853 -129625435 + MER1A DNA MER1_type 1 354 -2346 1922 75 4 0 chr10 15963853 15964093 -129625195 + AluSx SINE Alu 60 300 -12 3661 115 11 46 chr10 15964093 15964262 -129625026 + MER1A DNA MER1_type 354 527 0 1076 220 123 82 chr10 15964262 15964384 -129624904 - L1MC5 LINE L1 -548 7413 7298 970 139 20 0 chr10 15965449 15965600 -129623688 - FRAM SINE Alu -23 153 1 496 222 23 6 chr10 15966146 15966322 -129622966 + CT-rich Low_complexity Low_complexity 2 180 0 278 193 18 18 chr10 15966350 15966464 -129622824 + CT-rich Low_complexity Low_complexity 2 115 0 369 0 0 0 chr10 15966464 15966505 -129622783 + (CA)n Simple_repeat Simple_repeat 1 41 0 246 307 54 78 chr10 15966740 15966906 -129622382 + L2 LINE L2 3081 3242 -30 32 35 0 18 chr10 15967124 15967145 -129622143 + AT_rich Low_complexity Low_complexity 1 21 -35 1863 182 0 3 chr10 15967145 15967453 -129621835 + AluJo SINE Alu 1 307 -5 32 35 0 18 chr10 15967453 15967488 -129621800 + AT_rich Low_complexity Low_complexity 21 56 0 2197 91 44 3 chr10 15967775 15968044 -129621244 + AluSg SINE Alu 1 285 -25 279 0 0 0 chr10 15968044 15968075 -129621213 + (CA)n Simple_repeat Simple_repeat 2 32 0 2197 91 44 3 chr10 15968075 15968103 -129621185 + AluSg SINE Alu 285 310 0 1878 127 53 7 chr10 15968217 15968501 -129620787 + AluSx SINE Alu 1 297 -15 238 163 62 0 chr10 15969660 15969740 -129619548 + (TA)n Simple_repeat Simple_repeat 1 85 0 2177 110 3 0 chr10 15969880 15970171 -129619117 + AluSc SINE Alu 1 292 -17 22 0 0 0 chr10 15970171 15970193 -129619095 + AT_rich Low_complexity Low_complexity 1 22 0 1420 152 16 20 chr10 15970205 15970449 -129618839 + AluJo SINE Alu 45 287 -25 838 161 0 15 chr10 15970554 15970691 -129618597 + AluJo SINE Alu 1 135 -177 1510 189 21 11 chr10 15970691 15970971 -129618317 + AluJo SINE Alu 1 283 -29 226 298 0 0 chr10 15971768 15971825 -129617463 + GA-rich Low_complexity Low_complexity 99 155 0 620 247 96 90 chr10 15971912 15972151 -129617137 - L2 LINE L2 0 3313 3070 225 65 0 0 chr10 15972151 15972182 -129617106 + (TG)n Simple_repeat Simple_repeat 1 31 0 620 247 96 90 chr10 15972182 15972274 -129617014 - L2 LINE L2 -243 3070 2980 517 311 44 19 chr10 15972587 15972793 -129616495 + MIR SINE MIR 52 262 0 929 227 43 11 chr10 15973232 15973514 -129615774 + L1MA4 LINE L1 6009 6299 -1 219 277 64 92 chr10 15973556 15973667 -129615621 + L2 LINE L2 2687 2800 -472 1913 160 3 0 chr10 15973667 15973973 -129615315 + AluJb SINE Alu 1 307 -5 219 277 64 92 chr10 15973973 15974262 -129615026 + L2 LINE L2 2800 3067 -205 26 0 0 0 chr10 15974394 15974420 -129614868 + AT_rich Low_complexity Low_complexity 1 26 0 2141 109 3 0 chr10 15974421 15974704 -129614584 - AluSx SINE Alu -24 288 5 3648 149 20 30 chr10 15974723 15975180 -129614108 - L1PB4 LINE L1 -12 6144 5693 2016 110 62 7 chr10 15975180 15975470 -129613818 - AluSq SINE Alu -7 306 1 3648 149 20 30 chr10 15975470 15975654 -129613634 - L1PB4 LINE L1 -463 5693 5509 376 302 47 31 chr10 15976073 15976265 -129613023 + MIR SINE MIR 40 234 -28 274 217 14 14 chr10 15976284 15976353 -129612935 + (TAG)n Simple_repeat Simple_repeat 3 71 0 21 0 0 0 chr10 15976706 15976727 -129612561 + GC_rich Low_complexity Low_complexity 1 21 0 2146 119 10 3 chr10 15977316 15977696 -129611592 - AluSp SINE Alu 0 382 1 2497 74 0 0 chr10 15977707 15978018 -129611270 - AluY SINE Alu 0 311 1 25 65 0 0 chr10 15978470 15978516 -129610772 + AT_rich Low_complexity Low_complexity 1 46 0 1720 145 69 28 chr10 15978903 15979193 -129610095 + AluSx SINE Alu 4 305 -7 1060 180 0 0 chr10 15979209 15979381 -129609907 - FRAM SINE Alu -10 166 1 922 260 66 17 chr10 15979394 15979682 -129609606 + MLT1J LTR MaLR 210 511 0 3369 143 10 56 chr10 15980344 15980972 -129608316 - LTR9 LTR ERV1 0 612 14 222 62 0 0 chr10 15980973 15981005 -129608283 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 2157 69 0 79 chr10 15981005 15981308 -129607980 - AluY SINE Alu -32 279 1 390 259 139 6 chr10 15981335 15981501 -129607787 - MIR SINE MIR -48 214 27 732 211 13 6 chr10 15981946 15982102 -129607186 + FRAM SINE Alu 2 158 -18 1887 152 0 26 chr10 15982121 15982424 -129606864 + AluJo SINE Alu 1 295 -17 369 246 94 22 chr10 15982481 15982619 -129606669 - MARNA DNA Mariner -236 350 203 469 281 146 35 chr10 15984263 15984523 -129604765 + MLT1L LTR MaLR 3 291 -324 1239 170 0 28 chr10 15984534 15984746 -129604542 + AluJo SINE Alu 86 291 -21 729 208 0 0 chr10 15986479 15986609 -129602679 - FLAM_A SINE Alu 0 133 4 4535 152 66 24 chr10 15986938 15987805 -129601483 + MER4D LTR ERV1 1 903 0 2412 86 13 0 chr10 15988415 15988719 -129600569 - AluSc SINE Alu -1 308 1 261 232 0 37 chr10 15989135 15989217 -129600071 + GA-rich Low_complexity Low_complexity 1 79 0 2083 247 46 26 chr10 15989219 15989789 -129599499 + MLT1G LTR MaLR 1 581 -9 24 53 0 0 chr10 15990008 15990046 -129599242 + AT_rich Low_complexity Low_complexity 1 38 0 255 308 0 0 chr10 15990281 15990346 -129598942 - L2 LINE L2 -20 3252 3188 1059 235 18 43 chr10 15990601 15990878 -129598410 + MLT1A2 LTR MaLR 6 275 -99 24 53 0 0 chr10 15991077 15991115 -129598173 + AT_rich Low_complexity Low_complexity 1 38 0 455 233 25 74 chr10 15991122 15991285 -129598003 - HAL1 LINE L1 -1 2506 2352 437 322 153 8 chr10 15991965 15992220 -129597068 + L3 LINE CR1 208 499 -1078 2016 128 0 3 chr10 15992339 15992654 -129596634 + AluSx SINE Alu 1 314 0 184 380 20 10 chr10 15992708 15992808 -129596480 + L3 LINE CR1 1440 1540 -37 1733 150 73 4 chr10 15992834 15993108 -129596180 - AluJo SINE Alu -19 293 1 23 0 0 0 chr10 15994720 15994743 -129594545 + AT_rich Low_complexity Low_complexity 1 23 0 1880 257 19 38 chr10 15994917 15995636 -129593652 - L1M4 LINE L1 -4831 1711 1067 2111 127 0 7 chr10 15995885 15996216 -129593072 + AluSx SINE Alu 1 312 0 1024 268 90 26 chr10 15996861 15996966 -129592322 + L2 LINE L2 2829 2926 -387 2269 193 11 106 chr10 15996966 15997512 -129591776 + MLT2B3 LTR ERVL 1 484 -70 1800 174 26 7 chr10 15997512 15997839 -129591449 + AluJb SINE Alu 1 312 0 2269 193 11 106 chr10 15997839 15997904 -129591384 + MLT2B3 LTR ERVL 484 554 0 1024 268 90 26 chr10 15997904 15998254 -129591034 + L2 LINE L2 2926 3313 0 1723 148 52 86 chr10 15998926 15999310 -129589978 - THE1C LTR MaLR -4 371 1 23 0 0 0 chr10 15999894 15999917 -129589371 + AT_rich Low_complexity Low_complexity 1 23 0 966 172 0 24 chr10 15999960 16000129 -129589159 + FRAM SINE Alu 1 159 -17 2179 94 0 4 chr10 16001818 16002116 -129587172 - AluSc SINE Alu 0 305 9 2068 109 0 0 chr10 16003417 16003692 -129585596 - AluSx SINE Alu -3 309 35 527 335 67 38 chr10 16005774 16006225 -129583063 - LTR16B LTR ERVL 0 464 1 229 300 17 0 chr10 16006269 16006329 -129582959 - MIR3 SINE MIR -25 183 123 238 245 112 49 chr10 16006503 16006646 -129582642 - L1ME4a LINE L1 -5 6116 5965 2391 77 7 0 chr10 16007349 16007659 -129581629 + L1MA3 LINE L1 5638 5949 -356 22 70 0 0 chr10 16007662 16007705 -129581583 + AT_rich Low_complexity Low_complexity 1 43 0 22 35 0 0 chr10 16007853 16007882 -129581406 + AT_rich Low_complexity Low_complexity 1 29 0 2411 90 10 3 chr10 16008807 16009117 -129580171 + AluSq SINE Alu 1 312 -1 354 45 0 0 chr10 16009639 16009683 -129579605 + (TG)n Simple_repeat Simple_repeat 1 44 0 220 163 0 41 chr10 16011546 16011595 -129577693 - L2 LINE L2 -5 3308 3262 224 308 77 26 chr10 16011818 16011935 -129577353 + L2 LINE L2 3145 3267 -5 2560 52 0 10 chr10 16012341 16012647 -129576641 - AluY SINE Alu -8 303 1 344 43 0 0 chr10 16012699 16012745 -129576543 - MADE1 DNA Mariner -34 46 1 247 242 121 25 chr10 16013353 16013510 -129575778 + L1MC4 LINE L1 7698 7869 -173 1457 160 4 4 chr10 16013572 16013797 -129575491 + AluJo SINE Alu 1 225 -87 203 316 32 11 chr10 16014051 16014146 -129575142 - L3b LINE CR1 -132 1451 1355 2181 97 0 57 chr10 16014387 16014718 -129574570 - AluSx SINE Alu 0 312 1 220 188 31 62 chr10 16014755 16014819 -129574469 + L2 LINE L2 3168 3229 -84 293 100 20 0 chr10 16015428 16015478 -129573810 + (CA)n Simple_repeat Simple_repeat 2 52 0 2461 88 0 0 chr10 16016531 16016839 -129572449 - AluY SINE Alu -3 308 1 1940 147 0 38 chr10 16017311 16017631 -129571657 - AluSq SINE Alu -5 308 1 400 296 33 0 chr10 16017771 16017923 -129571365 + MER103 DNA DNA 2 158 -8 2080 117 47 7 chr10 16019004 16019304 -129569984 + AluSx SINE Alu 1 312 0 2166 130 3 0 chr10 16019619 16019927 -129569361 - AluSg SINE Alu -1 309 1 251 288 58 50 chr10 16020109 16020248 -129569040 + MIR SINE MIR 24 163 -99 2315 87 17 0 chr10 16020266 16020566 -129568722 - AluSx SINE Alu -7 305 1 826 253 93 19 chr10 16020867 16021191 -129568097 - L1MC/D LINE L1 -2147 5661 5314 420 20 0 0 chr10 16021453 16021502 -129567786 + (ATG)n Simple_repeat Simple_repeat 1 49 0 1323 201 0 35 chr10 16021513 16021772 -129567516 - AluJo SINE Alu -25 287 38 22 0 0 0 chr10 16021772 16021794 -129567494 + AT_rich Low_complexity Low_complexity 1 22 0 1339 105 6 0 chr10 16022003 16022184 -129567104 - AluSx SINE Alu 0 312 131 847 89 32 0 chr10 16022327 16022451 -129566837 - AluSx SINE Alu -185 128 1 2823 17 0 0 chr10 16022481 16022782 -129566506 - AluYa5 SINE Alu -10 301 1 414 78 188 0 chr10 16022805 16022869 -129566419 + MADE1 DNA Mariner 4 79 -1 229 188 25 88 chr10 16024431 16024511 -129564777 + MER5A DNA MER1_type 114 188 -1 1996 100 64 4 chr10 16024590 16024870 -129564418 + AluSc SINE Alu 1 297 -12 2164 132 0 0 chr10 16024918 16025214 -129564074 + AluSx SINE Alu 1 296 -16 225 239 0 0 chr10 16025343 16025389 -129563899 - Charlie8 DNA MER1_type -6 2411 2366 1755 193 0 7 chr10 16025938 16026244 -129563044 - AluJb SINE Alu -8 304 1 2342 96 0 3 chr10 16026367 16026669 -129562619 - AluSx SINE Alu -11 301 1 734 248 86 0 chr10 16026790 16027012 -129562276 - MIR SINE MIR -4 258 18 640 290 95 12 chr10 16027488 16027879 -129561409 - L1ME LINE L1 -481 5681 5255 1816 155 7 0 chr10 16027921 16028198 -129561090 + AluSx SINE Alu 1 279 -33 843 234 56 14 chr10 16028240 16028454 -129560834 + MIR SINE MIR 16 238 -24 1463 206 7 14 chr10 16028576 16028863 -129560425 - AluJo SINE Alu -27 285 1 606 233 70 38 chr10 16029047 16029294 -129559994 - HERVL LTR ERVL -1138 4347 4107 441 292 0 9 chr10 16029322 16029435 -129559853 + LTR33 LTR ERVL 108 219 -302 2359 104 7 0 chr10 16030382 16030689 -129558599 + AluSx SINE Alu 1 309 -3 393 331 45 19 chr10 16031031 16031188 -129558100 + L2 LINE L2 3153 3313 0 1751 195 126 29 chr10 16031314 16031766 -129557522 + MLT1D LTR MaLR 1 496 -9 316 236 72 40 chr10 16031991 16032213 -129557075 + MLT1K LTR MaLR 280 540 -48 2665 137 34 5 chr10 16032314 16032730 -129556558 + MSTA LTR MaLR 1 428 0 593 297 84 4 chr10 16033333 16033596 -129555692 - MER102a DNA MER1_type -6 324 41 1595 153 28 17 chr10 16034317 16034604 -129554684 - L1MB3 LINE L1 -1 6182 5893 2140 121 0 0 chr10 16034615 16034905 -129554383 + AluSx SINE Alu 1 290 -22 316 314 0 10 chr10 16034932 16035034 -129554254 - L2 LINE L2 0 3313 3213 435 331 115 22 chr10 16035090 16035116 -129554172 - L2 LINE L2 -963 2351 2329 1809 145 39 0 chr10 16035116 16035398 -129553890 + AluSx SINE Alu 1 293 -19 435 331 115 22 chr10 16035398 16035727 -129553561 - L2 LINE L2 -985 2329 1963 796 95 0 9 chr10 16035809 16035914 -129553374 - FLAM_C SINE Alu -19 124 21 433 284 87 84 chr10 16036972 16037317 -129551971 - MLT1H LTR MaLR -201 348 3 255 31 0 0 chr10 16037745 16037777 -129551511 + (TC)n Simple_repeat Simple_repeat 1 32 0 225 0 0 0 chr10 16037776 16037801 -129551487 + (CA)n Simple_repeat Simple_repeat 1 25 0 * 2528 96 61 9 chr10 16038577 16038922 -129550366 - THE1B LTR MaLR -1 363 1 279 297 47 39 chr10 16039257 16039385 -129549903 + MIR SINE MIR 19 147 -115 1882 185 62 36 chr10 16039396 16039845 -129549443 + MER31B LTR ERV1 1 461 -5 235 343 29 19 chr10 16039849 16039954 -129549334 + MIR SINE MIR 154 259 -3 2529 71 3 0 chr10 16039962 16040272 -129549016 - AluY SINE Alu 0 311 1 302 368 65 0 chr10 16040334 16040489 -129548799 - L3 LINE CR1 -286 1291 1127 275 327 212 18 chr10 16040908 16041125 -129548163 - L3 LINE CR1 -827 750 492 917 178 12 12 chr10 16041439 16041602 -129547686 - FRAM SINE Alu -13 163 1 1871 180 65 56 chr10 16041626 16042088 -129547200 + MLT1C LTR MaLR 1 466 -1 2188 109 0 13 chr10 16042386 16042688 -129546600 + AluSx SINE Alu 1 298 -14 1690 123 4 4 chr10 16043562 16043797 -129545491 + AluSx SINE Alu 1 235 -77 1388 167 0 28 chr10 16043797 16044048 -129545240 - AluJo SINE Alu -68 244 1 27 49 0 0 chr10 16044269 16044310 -129544978 + AT_rich Low_complexity Low_complexity 1 41 0 315 279 27 99 chr10 16044413 16044549 -129544739 + L1ME LINE L1 5580 5695 -426 1694 147 42 3 chr10 16044549 16044834 -129544454 - AluJo SINE Alu -10 302 7 315 279 27 99 chr10 16044834 16044919 -129544369 + L1ME LINE L1 5695 5785 -336 409 211 13 92 chr10 16045355 16045446 -129543842 - L1MB8 LINE L1 -1 6177 6080 210 37 0 0 chr10 16045446 16045473 -129543815 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 2158 90 18 0 chr10 16045473 16045751 -129543537 - AluSg SINE Alu -27 283 1 409 211 13 92 chr10 16045751 16045810 -129543478 - L1MB8 LINE L1 -96 6082 6038 2265 109 0 10 chr10 16046396 16046709 -129542579 - AluSx SINE Alu 0 312 3 2148 108 3 7 chr10 16049337 16049632 -129539656 - AluSx SINE Alu -18 294 1 521 231 186 13 chr10 16051850 16052006 -129537282 - MIR3 SINE MIR -1 207 25 1883 138 4 4 chr10 16052139 16052415 -129536873 + AluSx SINE Alu 1 276 -36 2030 135 0 16 chr10 16053026 16053330 -129535958 - AluSx SINE Alu -11 301 3 2304 139 44 13 chr10 16053863 16054250 -129535038 + L1MA4 LINE L1 5897 6295 -5 203 286 0 0 chr10 16054461 16054510 -129534778 - L3 LINE CR1 -3 1574 1526 2092 120 3 17 chr10 16054738 16055038 -129534250 + AluSx SINE Alu 1 296 -16 2103 111 0 66 chr10 16055636 16055968 -129533320 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr10 16057005 16057026 -129532262 + AT_rich Low_complexity Low_complexity 1 21 0 1084 139 0 0 chr10 16057029 16057180 -129532108 - FRAM SINE Alu -24 152 2 604 143 0 159 chr10 16057289 16057369 -129531919 - Charlie5 DNA MER1_type 0 2585 2550 2321 88 3 13 chr10 16057369 16057677 -129531611 + AluSx SINE Alu 1 305 -7 604 143 0 159 chr10 16057677 16057785 -129531503 - Charlie5 DNA MER1_type -35 2550 2427 515 154 138 0 chr10 16057825 16057948 -129531340 - Charlie5 DNA MER1_type -121 2491 2352 * 612 192 34 41 chr10 16057947 16058093 -129531195 - Charlie5 DNA MER1_type -2413 199 55 2196 111 3 0 chr10 16058187 16058484 -129530804 - AluSp SINE Alu -15 298 1 1971 116 3 66 chr10 16059915 16060234 -129529054 - AluJb SINE Alu -3 309 11 761 116 27 7 chr10 16060943 16061089 -129528199 + CT-rich Low_complexity Low_complexity 1 149 0 620 178 76 8 chr10 16061089 16061207 -129528081 - FRAM SINE Alu 0 40 1 355 274 168 33 chr10 16061291 16061515 -129527773 - MIR SINE MIR -12 250 3 349 260 85 55 chr10 16061521 16061693 -129527595 + MER5A DNA MER1_type 2 187 -2 443 281 183 0 chr10 16061817 16061970 -129527318 - MER5A DNA MER1_type 0 189 9 2284 97 13 0 chr10 16062274 16062572 -129526716 + AluSg SINE Alu 1 302 -8 21 57 0 0 chr10 16063173 16063208 -129526080 + AT_rich Low_complexity Low_complexity 1 35 0 387 208 0 0 chr10 16063319 16063439 -129525849 + (TCCA)n Simple_repeat Simple_repeat 3 122 0 2081 118 0 23 chr10 16063664 16063969 -129525319 + AluSq SINE Alu 1 298 -15 909 197 66 38 chr10 16064005 16064157 -129525131 - MER20 DNA MER1_type 0 219 58 2140 101 37 3 chr10 16064157 16064455 -129524833 + AluSg SINE Alu 1 308 -2 909 197 66 38 chr10 16064455 16064515 -129524773 - MER20 DNA MER1_type -161 58 1 1743 175 97 27 chr10 16064700 16065101 -129524187 - MER63B DNA MER1_type -7 429 1 2159 115 0 10 chr10 16065922 16066218 -129523070 - AluSx SINE Alu -19 293 1 196 288 4 0 chr10 16066266 16066317 -129522971 - MER5A DNA MER1_type -59 119 68 4511 127 70 58 chr10 16066795 16068199 -129521089 + pTR5 LTR ERV1 743 2606 0 1389 211 68 0 chr10 16069844 16069965 -129519323 + AluJo SINE Alu 1 112 -200 183 42 0 0 chr10 16069965 16069989 -129519299 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1389 211 68 0 chr10 16069989 16070147 -129519141 + AluJo SINE Alu 112 299 -13 2334 103 3 0 chr10 16070239 16070540 -129518748 + AluSx SINE Alu 1 302 -10 373 37 0 19 chr10 16070616 16070670 -129518618 + L1PA3 LINE L1 6103 6155 0 234 0 0 0 chr10 16070962 16070988 -129518300 + (T)n Simple_repeat Simple_repeat 1 26 0 2850 133 18 13 chr10 16071662 16071812 -129517476 - L1MA4 LINE L1 -2 6298 6150 2419 108 61 0 chr10 16071812 16072155 -129517133 + THE1B LTR MaLR 1 364 0 2850 133 18 13 chr10 16072155 16072457 -129516831 - L1MA4 LINE L1 -150 6150 5844 892 196 68 96 chr10 16072798 16073163 -129516125 + MER66A LTR ERV1 97 336 -142 509 169 0 0 chr10 16073282 16073359 -129515929 + MER66A LTR ERV1 402 478 0 183 274 104 57 chr10 16073621 16073727 -129515561 - L2 LINE L2 -5 3267 3157 762 234 62 0 chr10 16074260 16074452 -129514836 + MER3 DNA MER1_type 1 204 -5 671 249 22 27 chr10 16074709 16074894 -129514394 + MIR SINE MIR 63 246 -16 353 281 185 7 chr10 16075097 16075243 -129514045 - MIR3 SINE MIR -5 203 32 274 116 0 0 chr10 16075455 16075498 -129513790 + MLT1F LTR MaLR 339 381 -161 1475 203 57 91 chr10 16075737 16076021 -129513267 + MLT1C LTR MaLR 7 299 -168 1603 193 0 11 chr10 16076021 16076306 -129512982 + AluJo SINE Alu 1 282 -30 216 23 0 68 chr10 16076309 16076353 -129512935 + (CAAAA)n Simple_repeat Simple_repeat 1 41 0 1475 203 57 91 chr10 16076353 16076538 -129512750 + MLT1C LTR MaLR 301 464 -3 2256 210 92 8 chr10 16076663 16077163 -129512125 + MLT1F LTR MaLR 1 542 0 695 275 132 11 chr10 16077165 16077445 -129511843 + L2 LINE L2 2345 2658 -656 326 238 161 30 chr10 16077681 16077849 -129511439 - L1ME3A LINE L1 -219 5951 5762 855 259 111 58 chr10 16077990 16078403 -129510885 + L2 LINE L2 2879 3313 0 1097 211 28 0 chr10 16078463 16078676 -129510612 + MER20 DNA MER1_type 1 219 0 434 147 22 21 chr10 16078683 16078899 -129510389 + GA-rich Low_complexity Low_complexity 1 216 0 2092 140 0 7 chr10 16079298 16079605 -129509683 + AluSg SINE Alu 1 305 -5 23 92 0 0 chr10 16080032 16080097 -129509191 + AT_rich Low_complexity Low_complexity 1 65 0 1632 164 0 4 chr10 16080107 16080369 -129508919 - AluSx SINE Alu -19 293 33 2451 97 0 0 chr10 16081210 16081519 -129507769 - AluSq SINE Alu -4 309 1 2225 127 41 39 chr10 16081973 16082336 -129506952 + THE1B LTR MaLR 1 364 0 2236 90 0 7 chr10 16084142 16084442 -129504846 - AluY SINE Alu -9 302 5 2387 60 0 3 chr10 16084550 16084833 -129504455 - L1PA7 LINE L1 -7 6147 5866 1968 149 0 3 chr10 16084983 16085278 -129504010 + AluSx SINE Alu 1 294 -18 2307 122 0 0 chr10 16086083 16086395 -129502893 - AluSx SINE Alu 0 312 1 477 100 0 0 chr10 16087035 16087095 -129502193 + Alu SINE Alu 2 61 -257 758 129 0 0 chr10 16087452 16087568 -129501720 - L1MB3 LINE L1 -40 6143 6028 2082 114 28 3 chr10 16087673 16087963 -129501325 + AluSq SINE Alu 1 297 -16 303 28 0 0 chr10 16088673 16088709 -129500579 + (TTTC)n Simple_repeat Simple_repeat 2 37 0 623 173 140 39 chr10 16088710 16088889 -129500399 - MSTA LTR MaLR -51 377 181 2164 51 0 8 chr10 16089656 16089913 -129499375 - AluY SINE Alu -18 293 39 2310 91 7 10 chr10 16089973 16090282 -129499006 - AluSx SINE Alu -4 308 1 280 145 16 0 chr10 16090519 16090581 -129498707 - L1MA3 LINE L1 -1 6304 6242 1133 125 42 5 chr10 16090681 16090873 -129498415 - L1MA3 LINE L1 -91 6214 6016 2055 148 3 0 chr10 16091125 16091422 -129497866 + AluSx SINE Alu 1 298 -14 876 127 0 45 chr10 16091545 16091679 -129497609 - FLAM_C SINE Alu -5 128 1 345 351 39 39 chr10 16093490 16093686 -129495602 - L2 LINE L2 -1207 2107 1912 2721 83 0 3 chr10 16093686 16094025 -129495263 + L1PA10 LINE L1 5828 6165 -3 345 351 39 39 chr10 16094025 16094039 -129495249 - L2 LINE L2 -1402 1912 1899 1615 167 20 20 chr10 16094039 16094338 -129494950 + AluJo SINE Alu 14 312 0 345 351 39 39 chr10 16094338 16094411 -129494877 - L2 LINE L2 -1414 1900 1823 238 265 59 74 chr10 16094508 16094892 -129494396 + L1ME4a LINE L1 5670 6051 -70 1271 229 70 3 chr10 16094934 16095218 -129494070 - AluJo SINE Alu -9 303 1 405 58 0 0 chr10 16095238 16095290 -129493998 + (TA)n Simple_repeat Simple_repeat 1 52 0 273 293 111 43 chr10 16095482 16095690 -129493598 - L2 LINE L2 -1480 1834 1613 2236 135 24 34 chr10 16095812 16096191 -129493097 - THE1C LTR MaLR 0 375 1 2575 148 23 26 chr10 16096880 16097307 -129491981 + MSTB LTR MaLR 1 426 0 2069 114 7 16 chr10 16097661 16097967 -129491321 + AluSx SINE Alu 1 303 -9 240 35 0 0 chr10 16099387 16099416 -129489872 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1266 244 7 19 chr10 16099616 16099923 -129489365 - AluSq SINE Alu 0 303 1 1648 186 3 35 chr10 16100631 16100943 -129488345 - AluJo SINE Alu -10 302 1 636 138 0 21 chr10 16102313 16102407 -129486881 - FLAM_A SINE Alu -19 123 32 2506 80 0 6 chr10 16103046 16103360 -129485928 + AluSq SINE Alu 1 312 -1 181 111 67 0 chr10 16106597 16106642 -129482646 + A-rich Low_complexity Low_complexity 2 49 0 814 177 0 0 chr10 16106712 16106842 -129482446 - FLAM_C SINE Alu -3 130 1 2292 92 0 0 chr10 16107115 16107407 -129481881 - AluSc SINE Alu -15 294 3 27 29 0 0 chr10 16107411 16107445 -129481843 + AT_rich Low_complexity Low_complexity 1 34 0 1748 153 0 4 chr10 16107849 16108137 -129481151 + AluJb SINE Alu 23 309 0 351 44 0 0 chr10 16108661 16108706 -129480582 + (TG)n Simple_repeat Simple_repeat 1 45 0 22 0 0 0 chr10 16109125 16109147 -129480141 + AT_rich Low_complexity Low_complexity 1 22 0 233 267 0 0 chr10 16109369 16109429 -129479859 + MIR SINE MIR 90 149 -113 248 266 9 46 chr10 16109985 16110094 -129479194 - MIR3 SINE MIR 0 208 104 3090 160 63 21 chr10 16110669 16111243 -129478045 - L1MD1 LINE L1 0 6242 5645 22 0 0 0 chr10 16111704 16111726 -129477562 + AT_rich Low_complexity Low_complexity 1 22 0 1600 226 72 62 chr10 16112414 16113125 -129476163 + L1ME1 LINE L1 2804 3521 -2625 1990 256 22 7 chr10 16113129 16113677 -129475611 + L1ME1 LINE L1 3618 4173 -1973 1449 250 72 86 chr10 16113696 16114263 -129475025 + MER77 LTR ERV1 41 599 -6 437 227 62 23 chr10 16114348 16114476 -129474812 + L1ME1 LINE L1 4171 4303 -1843 2894 216 81 37 chr10 16114526 16114677 -129474611 + L1ME1 LINE L1 4787 4930 -1236 2015 161 0 0 chr10 16114677 16114987 -129474301 + AluJo SINE Alu 1 310 -2 2894 216 81 37 chr10 16114987 16115811 -129473477 + L1ME1 LINE L1 4930 5845 -321 3660 53 2 2 chr10 16115811 16116243 -129473045 + L1PA7 LINE L1 5719 6150 -4 2894 216 81 37 chr10 16116243 16116575 -129472713 + L1ME1 LINE L1 5845 6161 -5 2006 131 0 0 chr10 16116735 16117010 -129472278 + AluSx SINE Alu 1 275 -37 252 0 0 0 chr10 16117017 16117045 -129472243 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 1072 284 72 40 chr10 16117046 16117491 -129471797 + L1ME3A LINE L1 5322 5792 -378 1895 105 63 14 chr10 16117491 16117777 -129471511 + AluSx SINE Alu 1 300 -12 1072 284 72 40 chr10 16117777 16117929 -129471359 + L1ME3A LINE L1 5792 5938 -232 346 268 133 4 chr10 16117942 16118085 -129471203 + MIR SINE MIR 2 172 -36 2468 94 0 0 chr10 16118770 16119078 -129470210 - AluSq SINE Alu -4 309 2 1981 113 3 69 chr10 16119647 16119965 -129469323 - AluSx SINE Alu -15 297 1 1152 66 0 0 chr10 16120150 16120286 -129469002 - AluSc SINE Alu -173 136 1 2236 121 0 0 chr10 16122830 16123128 -129466160 - AluSx SINE Alu -14 298 1 405 0 0 0 chr10 16124471 16124516 -129464772 + (TTATA)n Simple_repeat Simple_repeat 5 49 0 258 32 0 0 chr10 16125659 16125690 -129463598 + (ATTG)n Simple_repeat Simple_repeat 4 34 0 1541 191 49 0 chr10 16125690 16125957 -129463331 - AluJb SINE Alu -32 280 1 597 311 31 13 chr10 16126395 16126623 -129462665 - MIR SINE MIR -25 237 6 208 336 91 0 chr10 16126724 16126834 -129462454 - MIR SINE MIR -7 255 136 2181 123 0 0 chr10 16126906 16127206 -129462082 - AluSg SINE Alu -10 300 1 2201 110 3 10 chr10 16127566 16127866 -129461422 + AluSg SINE Alu 1 298 -12 2022 103 53 0 chr10 16128850 16129132 -129460156 + AluSp SINE Alu 1 297 -16 564 290 85 0 chr10 16129327 16129503 -129459785 + MIR SINE MIR 21 211 -51 245 214 22 67 chr10 16129756 16129845 -129459443 + MER103 DNA DNA 38 122 -44 24 32 0 0 chr10 16131390 16131421 -129457867 + AT_rich Low_complexity Low_complexity 1 31 0 267 265 121 12 chr10 16131598 16131681 -129457607 + L2 LINE L2 3193 3284 -29 184 208 62 0 chr10 16132410 16132458 -129456830 - L2 LINE L2 -1 3312 3262 275 214 29 29 chr10 16132598 16132668 -129456620 - L2 LINE L2 -188 3084 3015 479 277 66 121 chr10 16132685 16132708 -129456580 + MIR SINE MIR 13 36 -226 2078 124 0 0 chr10 16132708 16132990 -129456298 + AluSx SINE Alu 4 316 0 192 32 65 0 chr10 16132990 16133021 -129456267 + A-rich Low_complexity Low_complexity 2 180 0 479 277 66 121 chr10 16133021 16133175 -129456113 + MIR SINE MIR 36 175 -87 1178 35 0 28 chr10 16133175 16133317 -129455971 - L1PA5 LINE L1 -2 6152 6015 479 277 66 121 chr10 16133317 16133393 -129455895 + MIR SINE MIR 175 254 -8 483 300 111 12 chr10 16133618 16133871 -129455417 - L2 LINE L2 -471 2843 2566 2153 125 13 0 chr10 16134024 16134327 -129454961 + AluSx SINE Alu 1 307 -5 1193 174 43 0 chr10 16134424 16134659 -129454629 + L1MB3 LINE L1 5928 6172 -11 186 43 0 0 chr10 16134663 16134686 -129454602 + (ATG)n Simple_repeat Simple_repeat 2 24 0 1831 183 0 3 chr10 16135521 16135832 -129453456 + AluJo SINE Alu 1 310 -2 323 161 0 58 chr10 16136014 16136101 -129453187 - L1MA10 LINE L1 0 6334 6253 507 233 0 45 chr10 16137608 16137741 -129451547 + MER63 DNA MER1_type 1 753 -83 267 277 24 0 chr10 16137740 16137823 -129451465 + MER63 DNA MER1_type 978 1062 0 * 273 29 0 0 chr10 16141469 16141503 -129447785 + (CA)n Simple_repeat Simple_repeat 2 35 0 186 301 14 68 chr10 16141678 16141824 -129447464 - L2 LINE L2 -299 2973 2836 2394 49 42 0 chr10 16144558 16144845 -129444443 - AluY SINE Alu -12 299 1 2148 117 0 0 chr10 16145945 16146272 -129443016 + AluSx SINE Alu 1 327 0 532 208 164 25 chr10 16146556 16146715 -129442573 + MER5A DNA MER1_type 9 189 0 709 241 24 18 chr10 16147405 16147575 -129441713 + MER5B DNA MER1_type 2 172 -6 231 301 44 18 chr10 16147910 16148023 -129441265 - LTR16B LTR ERVL -1 463 348 641 293 59 4 chr10 16148065 16148304 -129440984 - LTR16B LTR ERVL -212 252 1 2068 149 0 0 chr10 16148578 16148880 -129440408 - AluSx SINE Alu -10 302 1 409 325 15 35 chr10 16148911 16149111 -129440177 - MIR SINE MIR -18 244 49 336 284 84 32 chr10 16150187 16150377 -129438911 - MIR SINE MIR -2 260 61 2163 111 7 3 chr10 16150466 16150764 -129438524 - AluY SINE Alu -11 300 2 2220 179 26 7 chr10 16150881 16151311 -129437977 + L1PA16 LINE L1 5729 6166 0 3113 91 5 0 chr10 16151554 16151994 -129437294 + MLT2A2 LTR ERVL 12 453 0 744 314 62 0 chr10 16152037 16152343 -129436945 + LTR16C LTR ERVL 167 491 0 234 0 0 0 chr10 16153376 16153402 -129435886 + (CA)n Simple_repeat Simple_repeat 2 27 0 923 188 12 6 chr10 16154779 16154939 -129434349 + FRAM SINE Alu 1 153 -23 2078 126 3 0 chr10 16154943 16155259 -129434029 + AluSx SINE Alu 1 312 0 309 26 0 0 chr10 16155641 16155679 -129433609 + (CAAAA)n Simple_repeat Simple_repeat 3 40 0 529 297 102 13 chr10 16155866 16156169 -129433119 + L1ME LINE L1 5328 5657 -464 624 247 132 6 chr10 16156211 16156385 -129432903 - MIR SINE MIR -44 218 23 1956 145 0 0 chr10 16156471 16156787 -129432501 + AluSx SINE Alu 1 316 0 1137 264 116 0 chr10 16156787 16157218 -129432070 - L1ME1 LINE L1 -13 6153 5673 198 263 88 105 chr10 16157339 16157453 -129431835 + MIR SINE MIR 38 149 -59 1828 133 17 91 chr10 16158712 16158830 -129430458 + MLT1B LTR MaLR 1 126 -264 2729 157 91 59 chr10 16158830 16159288 -129430000 + LTR9 LTR ERV1 1 443 -169 212 0 0 35 chr10 16159288 16159317 -129429971 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 1869 113 53 0 chr10 16159320 16159586 -129429702 - AluSg SINE Alu -30 280 1 2729 157 91 59 chr10 16159586 16159716 -129429572 + LTR9 LTR ERV1 444 612 0 1828 133 17 91 chr10 16159716 16160003 -129429285 + MLT1B LTR MaLR 126 376 -14 206 336 8 34 chr10 16160081 16160200 -129429088 - L2 LINE L2 -6 3307 3192 3890 103 20 45 chr10 16160818 16161392 -129427896 + MER41B LTR ERV1 1 559 -76 2510 65 3 0 chr10 16161392 16161699 -129427589 - AluY SINE Alu -3 308 1 3890 103 20 45 chr10 16161699 16161775 -129427513 + MER41B LTR ERV1 559 635 0 589 139 37 0 chr10 16161823 16161931 -129427357 + L1MA4A LINE L1 6184 6295 -8 1127 143 35 150 chr10 16162201 16162601 -129426687 + MER4A LTR ERV1 1 354 -310 297 99 213 184 chr10 16162670 16162712 -129426576 + MER4C LTR ERV1 300 339 -126 2010 147 20 3 chr10 16162712 16163018 -129426270 + AluSx SINE Alu 1 311 -1 297 99 213 184 chr10 16163018 16163116 -129426172 + MER4C LTR ERV1 339 444 -21 188 88 59 0 chr10 16163382 16163416 -129425872 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 341 333 85 41 chr10 16163417 16163663 -129425625 - L2 LINE L2 -2 3270 3014 1585 82 0 0 chr10 16163906 16164138 -129425150 - L1PA7 LINE L1 -686 5486 5255 5343 56 0 0 chr10 16164138 16164796 -129424492 + L1PA7 LINE L1 5496 6154 0 248 139 0 0 chr10 16164814 16164850 -129424438 + tRNA-Arg-AGA tRNA tRNA 1 36 -40 606 200 0 8 chr10 16165730 16165850 -129423438 - MER63 DNA MER1_type -317 745 1 1891 147 48 7 chr10 16166495 16166787 -129422501 - AluSx SINE Alu -8 304 1 241 336 150 11 chr10 16167068 16167342 -129421946 + L2 LINE L2 2904 3215 -98 450 327 9 51 chr10 16167376 16167590 -129421698 - MIR SINE MIR -4 258 54 470 267 38 0 chr10 16167602 16167707 -129421581 + L2 LINE L2 3205 3313 0 708 190 116 27 chr10 16167761 16168019 -129421269 + L1MD3 LINE L1 7695 7975 -20 2402 110 0 0 chr10 16168063 16168372 -129420916 - AluSc SINE Alu 0 309 1 429 314 89 31 chr10 16168456 16168647 -129420641 - MIR3 SINE MIR 0 208 7 351 0 0 0 chr10 16168986 16169025 -129420263 + (CA)n Simple_repeat Simple_repeat 2 40 0 23 33 0 0 chr10 16169826 16169856 -129419432 + AT_rich Low_complexity Low_complexity 1 30 0 2081 126 0 0 chr10 16169930 16170216 -129419072 + AluSx SINE Alu 1 286 -26 277 263 120 45 chr10 16170408 16170541 -129418747 - MIR SINE MIR -83 179 37 1464 187 74 11 chr10 16170572 16170856 -129418432 - AluJb SINE Alu -6 306 5 1985 137 0 17 chr10 16171914 16172213 -129417075 + AluJo SINE Alu 3 296 -16 232 331 32 16 chr10 16172453 16172577 -129416711 + MER5A DNA MER1_type 60 185 -4 681 252 6 6 chr10 16172777 16172936 -129416352 - MER5B DNA MER1_type -19 159 1 2326 165 25 5 chr10 16173021 16173463 -129415825 - LTR32 LTR ERVL 0 471 21 1074 129 0 0 chr10 16174131 16174286 -129415002 - AluSg/x SINE Alu -22 288 134 2216 118 0 0 chr10 16174923 16175219 -129414069 + AluSc SINE Alu 9 304 -5 1950 135 7 7 chr10 16176361 16176649 -129412639 - AluSx SINE Alu -24 288 1 1563 200 0 10 chr10 16177348 16177501 -129411787 - AluJo SINE Alu -25 287 137 531 0 0 0 chr10 16177501 16177560 -129411728 + (TA)n Simple_repeat Simple_repeat 2 60 0 1563 200 0 10 chr10 16177560 16177696 -129411592 - AluJo SINE Alu -175 137 1 190 152 0 0 chr10 16177842 16177875 -129411413 - L2 LINE L2 -1 3312 3280 2343 69 23 23 chr10 16177879 16178185 -129411103 + AluY SINE Alu 1 306 -5 2901 3 0 0 chr10 16180517 16180829 -129408459 - AluYb8 SINE Alu -6 312 1 243 312 54 29 chr10 16181002 16181207 -129408081 + HAL1 LINE L1 2265 2474 -33 39 118 0 0 chr10 16181430 16181651 -129407637 + AT_rich Low_complexity Low_complexity 1 221 0 3104 170 49 14 chr10 16182381 16182416 -129406872 + L1MC2 LINE L1 5291 5323 -1021 2037 102 49 3 chr10 16182416 16182701 -129406587 + AluSg SINE Alu 1 298 -12 3104 170 49 14 chr10 16182701 16183319 -129405969 + L1MC2 LINE L1 5323 5967 -377 1413 185 15 34 chr10 16183368 16183756 -129405532 + MSTC LTR MaLR 1 428 0 224 281 90 94 chr10 16186139 16186406 -129402882 + L2 LINE L2 2853 3118 -195 2348 170 50 55 chr10 16186406 16186892 -129402396 - L1MC1 LINE L1 -6 6327 5843 2388 93 0 3 chr10 16186892 16187203 -129402085 - AluSx SINE Alu -2 310 1 2348 170 50 55 chr10 16187203 16187315 -129401973 - L1MC1 LINE L1 -490 5843 5732 388 281 146 49 chr10 16187324 16187509 -129401779 + L2 LINE L2 3111 3313 0 303 312 64 9 chr10 16187705 16187814 -129401474 + L2 LINE L2 3156 3270 -2 448 274 175 34 chr10 16188587 16188850 -129400438 - L3 LINE CR1 -7 1570 1271 1652 175 14 11 chr10 16188871 16189156 -129400132 + AluJb SINE Alu 1 286 -26 248 319 76 80 chr10 16189321 16189423 -129399865 - L3 LINE CR1 -612 965 864 2152 113 3 0 chr10 16189423 16189730 -129399558 - AluSx SINE Alu 0 308 1 248 319 76 80 chr10 16189730 16189914 -129399374 - L3 LINE CR1 -713 864 679 310 250 20 30 chr10 16189916 16190016 -129399272 + L2 LINE L2 3187 3285 -28 370 310 39 26 chr10 16190332 16190487 -129398801 - L3 LINE CR1 -990 587 431 831 114 0 30 chr10 16190578 16190709 -129398579 - FLAM_C SINE Alu -5 138 12 453 358 66 18 chr10 16191126 16191352 -129397936 - MIR SINE MIR -6 256 20 924 296 90 34 chr10 16191489 16191994 -129397294 + L2 LINE L2 2794 3313 0 1328 216 89 39 chr10 16192659 16193098 -129396190 + MLT1C LTR MaLR 5 465 -2 30 27 0 0 chr10 16193098 16193135 -129396153 + AT_rich Low_complexity Low_complexity 1 37 0 891 233 6 0 chr10 16193254 16193430 -129395858 + MER45A DNA AcHobo 2 178 0 1152 163 163 43 chr10 16193575 16193901 -129395387 + MER47A DNA MER2_type 1 365 -1 192 40 0 0 chr10 16194027 16194052 -129395236 + (CA)n Simple_repeat Simple_repeat 1 25 0 1520 144 57 133 chr10 16194110 16194477 -129394811 + Charlie3 DNA MER1_type 1 2712 0 2063 151 0 10 chr10 16195394 16195706 -129393582 - AluJo SINE Alu -3 309 1 21 36 0 0 chr10 16196360 16196388 -129392900 + AT_rich Low_complexity Low_complexity 1 28 0 1677 162 20 30 chr10 16196643 16196939 -129392349 - AluJb SINE Alu -19 293 1 870 245 38 60 chr10 16197091 16197356 -129391932 - MIR SINE MIR -2 260 2 37593 34 2 0 chr10 16197586 16203108 -129386180 - L1PA4 LINE L1 -3 6152 623 747 33 0 0 chr10 16203108 16203198 -129386090 - L1PA4 LINE L1 -6050 96 7 416 285 100 32 chr10 16203354 16203555 -129385733 - MIR SINE MIR -40 222 12 247 284 21 121 chr10 16203699 16203889 -129385399 + L2 LINE L2 2651 2821 -493 180 0 0 0 chr10 16204947 16204967 -129384321 + (A)n Simple_repeat Simple_repeat 1 20 0 243 0 0 0 chr10 16206133 16206160 -129383128 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1944 143 0 3 chr10 16206163 16206450 -129382838 - AluSg SINE Alu -24 286 1 406 344 19 19 chr10 16206464 16206621 -129382667 - MIR3 SINE MIR -10 198 42 1984 126 10 40 chr10 16207717 16208019 -129381269 + AluSg SINE Alu 1 293 -17 622 299 69 92 chr10 16208155 16208820 -129380468 + L2 LINE L2 2155 2804 -510 239 333 0 0 chr10 16208833 16208902 -129380386 + L2 LINE L2 2733 2801 -513 22 70 0 0 chr10 16209069 16209112 -129380176 + AT_rich Low_complexity Low_complexity 1 43 0 435 321 127 0 chr10 16209344 16209509 -129379779 - MER91A DNA MER1_type -8 188 3 362 282 57 8 chr10 16209623 16209747 -129379541 + L2 LINE L2 3184 3313 0 2212 123 7 0 chr10 16209796 16210098 -129379190 + AluSq SINE Alu 1 304 -9 2117 130 35 0 chr10 16210125 16210501 -129378787 + L1MA5 LINE L1 5912 6300 0 22 0 0 0 chr10 16211396 16211418 -129377870 + AT_rich Low_complexity Low_complexity 1 22 0 2119 122 3 3 chr10 16212370 16212673 -129376615 + AluSc SINE Alu 1 303 -6 1187 36 0 0 chr10 16213284 16213424 -129375864 - AluY SINE Alu -1 310 171 379 287 63 71 chr10 16215131 16215385 -129373903 + L2 LINE L2 3014 3265 -48 1979 129 17 13 chr10 16215640 16215942 -129373346 + AluJb SINE Alu 1 303 -9 549 110 0 0 chr10 16216330 16216412 -129372876 + (TCCA)n Simple_repeat Simple_repeat 4 85 0 1788 176 0 23 chr10 16217439 16217741 -129371547 - AluJb SINE Alu -17 295 1 3644 167 40 4 chr10 16221193 16221240 -129368048 + L1 LINE L1 3568 3612 -2534 1824 159 6 56 chr10 16221240 16221560 -129367728 + AluJb SINE Alu 1 304 -8 3644 167 40 4 chr10 16221560 16222241 -129367047 + L1 LINE L1 3612 4322 -1824 3120 289 147 13 chr10 16222278 16223937 -129365351 + L1M2a LINE L1 6 1886 -5282 * 4456 147 59 35 chr10 16223932 16225014 -129364274 + L1MA7 LINE L1 5156 6263 -28 1869 157 18 3 chr10 16225014 16225300 -129363988 - AluJo SINE Alu -22 290 1 4456 147 59 35 chr10 16225300 16225330 -129363958 + L1MA7 LINE L1 6263 6291 0 1883 171 4 0 chr10 16225853 16226168 -129363120 + AluSx SINE Alu 1 316 0 263 313 48 0 chr10 16226724 16226807 -129362481 + MIR SINE MIR 68 154 -108 191 79 53 40 chr10 16227145 16227221 -129362067 + (TA)n Simple_repeat Simple_repeat 1 77 0 252 175 63 28 chr10 16227376 16227519 -129361769 + (TA)n Simple_repeat Simple_repeat 2 149 0 195 42 0 0 chr10 16227583 16227607 -129361681 + (TA)n Simple_repeat Simple_repeat 2 25 0 996 168 84 148 chr10 16229622 16229920 -129359368 + AluJb SINE Alu 8 286 -26 189 0 0 0 chr10 16229951 16229972 -129359316 + (CA)n Simple_repeat Simple_repeat 2 22 0 1115 234 55 22 chr10 16230433 16230745 -129358543 - MER58B DNA MER1_type -14 327 6 6676 72 15 12 chr10 16230818 16231892 -129357396 - L1PB1 LINE L1 -1 6150 5078 2060 147 7 0 chr10 16231908 16232215 -129357073 + AluSx SINE Alu 1 309 -3 245 222 10 0 chr10 16232295 16232394 -129356894 + (TAGA)n Simple_repeat Simple_repeat 4 103 0 607 253 82 58 chr10 16232394 16232916 -129356372 - L1ME2 LINE L1 -330 5834 5300 402 276 109 21 chr10 16233195 16233387 -129355901 + L2 LINE L2 2806 3014 -299 1016 207 0 0 chr10 16233446 16233673 -129355615 + L1P LINE L1 5116 5342 -804 183 229 153 59 chr10 16233674 16233792 -129355496 + L2 LINE L2 3021 3149 -164 225 278 188 30 chr10 16233846 16233979 -129355309 + L2 LINE L2 3158 3311 -2 2312 104 0 0 chr10 16235198 16235495 -129353793 - AluSq SINE Alu -16 297 1 219 240 0 0 chr10 16236651 16236701 -129352587 + (CA)n Simple_repeat Simple_repeat 2 51 0 643 324 44 7 chr10 16236936 16237211 -129352077 + L2 LINE L2 2411 2695 -619 273 278 97 0 chr10 16237233 16237305 -129351983 - AluJo SINE Alu -143 159 81 1824 307 153 40 chr10 16238114 16239377 -129349911 + L2 LINE L2 1255 2739 -574 1483 184 26 8 chr10 16239377 16239644 -129349644 - AluJo SINE Alu -40 272 1 1824 307 153 40 chr10 16239644 16240006 -129349282 + L2 LINE L2 2739 3059 -254 1682 206 51 74 chr10 16240006 16240445 -129348843 + MLT1D LTR MaLR 1 428 -77 2220 131 0 0 chr10 16240445 16240757 -129348531 + AluSx SINE Alu 1 312 0 1682 206 51 74 chr10 16240757 16240831 -129348457 + MLT1D LTR MaLR 428 502 -3 339 44 0 0 chr10 16240857 16240902 -129348386 + (CA)n Simple_repeat Simple_repeat 1 45 0 435 315 69 23 chr10 16241646 16241906 -129347382 + MLT1I LTR MaLR 111 382 -27 265 304 34 34 chr10 16243129 16243277 -129346011 - L1ME4a LINE L1 -213 5908 5761 567 235 36 73 chr10 16244405 16244632 -129344656 - L1ME1 LINE L1 -19 6147 5967 23 0 0 0 chr10 16245082 16245105 -129344183 + AT_rich Low_complexity Low_complexity 1 23 0 2060 136 0 57 chr10 16245204 16245535 -129343753 + AluSx SINE Alu 1 312 0 294 87 0 0 chr10 16246760 16246806 -129342482 + (TTTTTA)n Simple_repeat Simple_repeat 2 47 0 321 296 184 15 chr10 16248351 16248565 -129340723 + MIR3 SINE MIR 1 250 -12 2206 100 31 0 chr10 16249575 16249866 -129339422 - AluSq SINE Alu -13 300 1 264 170 0 0 chr10 16253359 16253412 -129335876 + (TG)n Simple_repeat Simple_repeat 1 53 0 1281 163 23 19 chr10 16253445 16253709 -129335579 - AluJo SINE Alu 0 312 48 192 77 0 0 chr10 16253752 16253778 -129335510 + (TTC)n Simple_repeat Simple_repeat 2 27 0 819 148 7 22 chr10 16253780 16253915 -129335373 - FLAM_C SINE Alu 0 133 1 1781 99 3 114 chr10 16254747 16255071 -129334217 + AluSg SINE Alu 1 288 -22 2067 142 0 3 chr10 16255959 16256261 -129333027 + AluSx SINE Alu 1 301 -11 201 300 29 0 chr10 16256388 16256458 -129332830 - MIR SINE MIR -123 139 68 26 0 0 0 chr10 16258928 16258954 -129330334 + AT_rich Low_complexity Low_complexity 1 26 0 594 174 7 13 chr10 16259052 16259207 -129330081 + GA-rich Low_complexity Low_complexity 4 157 0 470 245 61 94 chr10 16259370 16259615 -129329673 - L2 LINE L2 -1 3312 3076 2442 97 44 36 chr10 16259843 16260204 -129329084 + THE1B LTR MaLR 1 364 0 514 294 28 0 chr10 16261046 16261189 -129328099 + MIR SINE MIR 2 148 -114 1683 183 34 29 chr10 16261209 16261559 -129327729 + MER46B DNA MER2_type 10 236 0 1692 160 63 45 chr10 16261859 16262191 -129327097 + MER44D DNA MER2_type 2 609 0 1497 272 51 23 chr10 16262490 16262751 -129326537 - L1ME3A LINE L1 -15 6155 5903 2114 121 0 29 chr10 16262751 16263066 -129326222 - AluSg1 SINE Alu -3 306 1 1497 272 51 23 chr10 16263066 16263079 -129326209 - L1ME3A LINE L1 -267 5903 5567 470 283 39 63 chr10 16263079 16263365 -129325923 - L1MA6 LINE L1 -431 5869 5591 * 1276 290 132 28 chr10 16263343 16264113 -129325175 - L1MEd LINE L1 -3879 2250 1561 207 0 0 0 chr10 16264113 16264136 -129325152 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1276 290 132 28 chr10 16264136 16264664 -129324624 - L1MEd LINE L1 -4568 1561 817 1216 203 17 17 chr10 16265491 16265727 -129323561 - MER46A DNA MER2_type 0 236 1 195 407 0 0 chr10 16265961 16266047 -129323241 - MIR SINE MIR -114 148 63 1766 167 0 35 chr10 16266169 16266481 -129322807 + AluJo SINE Alu 1 301 -11 4718 188 61 39 chr10 16266490 16267580 -129321708 + L1MC3 LINE L1 6663 7775 -10 2020 96 4 0 chr10 16267624 16267884 -129321404 - AluSp SINE Alu -14 299 39 198 0 0 0 chr10 16267962 16267984 -129321304 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 1885 188 0 0 chr10 16268007 16268311 -129320977 - AluJo SINE Alu -8 304 1 210 118 0 0 chr10 16268717 16268751 -129320537 + (A)n Simple_repeat Simple_repeat 1 34 0 361 321 44 15 chr10 16268990 16269127 -129320161 - L2 LINE L2 0 3313 3173 1879 111 8 0 chr10 16269200 16269461 -129319827 - AluY SINE Alu -23 288 26 339 250 148 0 chr10 16269497 16269585 -129319703 - MIR SINE MIR -91 171 71 1031 181 30 55 chr10 16269587 16269824 -129319464 + AluJo SINE Alu 55 285 -27 2072 132 7 0 chr10 16269840 16270144 -129319144 + AluSx SINE Alu 1 306 -6 269 318 45 23 chr10 16270481 16270613 -129318675 + MLT1K LTR MaLR 111 245 -343 272 230 11 71 chr10 16270817 16270932 -129318356 + MLT1K LTR MaLR 484 611 -4 205 75 50 25 chr10 16271092 16271132 -129318156 + A-rich Low_complexity Low_complexity 2 42 0 966 93 0 93 chr10 16271841 16271991 -129317297 + AluSq SINE Alu 35 170 -143 457 101 29 0 chr10 16271991 16272060 -129317228 + Alu SINE Alu 228 298 -11 2084 114 28 0 chr10 16272993 16273282 -129316006 - AluSx SINE Alu -15 297 1 2043 138 0 0 chr10 16273789 16274114 -129315174 - AluSx SINE Alu 0 325 1 307 252 138 49 chr10 16274567 16274690 -129314598 - L2 LINE L2 -7 3265 3132 3316 93 81 10 chr10 16275021 16275513 -129313775 - L1PA13 LINE L1 -6 6157 5631 268 267 100 11 chr10 16275562 16275652 -129313636 - L2 LINE L2 -2 3270 3173 2523 155 34 12 chr10 16276767 16277180 -129312108 - MSTB LTR MaLR 0 426 5 22 0 0 0 chr10 16277999 16278021 -129311267 + AT_rich Low_complexity Low_complexity 1 22 0 258 354 77 8 chr10 16278416 16278546 -129310742 - MER5B DNA MER1_type -10 168 30 2350 102 0 0 chr10 16329749 16330054 -129259234 - AluSx SINE Alu -5 307 3 268 299 188 8 chr10 16331445 16331562 -129257726 - MIR SINE MIR -115 147 10 193 264 19 19 chr10 16331608 16331661 -129257627 + L3b LINE CR1 1250 1302 -281 26 64 0 0 chr10 16332071 16332118 -129257170 + AT_rich Low_complexity Low_complexity 1 47 0 321 367 26 30 chr10 16334296 16334566 -129254722 + L2 LINE L2 2697 2965 -349 759 220 120 10 chr10 16337192 16337392 -129251896 - MIR SINE MIR -10 252 31 23 0 0 0 chr10 16338119 16338142 -129251146 + AT_rich Low_complexity Low_complexity 1 23 0 242 327 10 58 chr10 16340596 16340700 -129248588 + L2 LINE L2 3137 3235 -37 180 0 0 0 chr10 16341230 16341250 -129248038 + (A)n Simple_repeat Simple_repeat 1 20 0 301 277 107 9 chr10 16342191 16342303 -129246985 + MER5A DNA MER1_type 7 129 -60 313 284 28 26 chr10 16342345 16342524 -129246764 + MIR SINE MIR 3 244 -18 356 327 114 29 chr10 16342822 16343343 -129245945 - L1ME4a LINE L1 -289 5832 5267 1716 157 7 30 chr10 16343827 16344132 -129245156 - AluJo SINE Alu -14 298 1 2377 100 3 0 chr10 16344139 16344448 -129244840 - AluSq SINE Alu -3 310 1 2347 91 0 0 chr10 16345051 16345348 -129243940 - AluY SINE Alu -14 297 1 2499 77 0 0 chr10 16346678 16346988 -129242300 + AluY SINE Alu 1 310 -1 274 299 39 3 chr10 16347098 16347200 -129242088 + MIR SINE MIR 40 144 -64 237 231 46 15 chr10 16347330 16347395 -129241893 - L2 LINE L2 -87 3185 3119 189 107 0 0 chr10 16347772 16347800 -129241488 + (T)n Simple_repeat Simple_repeat 1 28 0 532 303 151 60 chr10 16348043 16348284 -129241004 + L2 LINE L2 1602 1820 -1493 5599 135 68 30 chr10 16348284 16349316 -129239972 + MER11C LTR ERVK 1 1071 0 532 303 151 60 chr10 16349316 16350442 -129238846 + L2 LINE L2 1820 3096 -217 1589 179 67 24 chr10 16351096 16351425 -129237863 - MER2 DNA MER2_type 0 344 2 4841 213 48 30 chr10 16351588 16352786 -129236502 + Charlie1a DNA MER1_type 2 1220 -235 334 212 0 0 chr10 16352798 16352864 -129236424 + Charlie1a DNA MER1_type 1390 1455 0 186 247 0 135 chr10 16354094 16354183 -129235105 + MIR SINE MIR 116 192 -70 27 0 0 0 chr10 16354579 16354606 -129234682 + AT_rich Low_complexity Low_complexity 1 27 0 1347 315 37 8 chr10 16355169 16355678 -129233610 + L2 LINE L2 2545 3069 -244 250 294 78 39 chr10 16356799 16356952 -129232336 - MIR SINE MIR 0 262 104 433 173 0 0 chr10 16357171 16357246 -129232042 + AluY SINE Alu 126 200 -111 2041 142 0 3 chr10 16357382 16357685 -129231603 - AluSx SINE Alu -10 302 1 508 321 95 16 chr10 16357686 16358054 -129231234 - HERV16 LTR ERVL -4447 549 153 988 299 46 11 chr10 16358197 16358565 -129230723 - LTR16A LTR ERVL -63 387 7 2226 105 0 3 chr10 16358631 16358926 -129230362 + AluSc SINE Alu 1 294 -15 542 194 0 37 chr10 16358975 16359083 -129230205 + U13 snRNA snRNA 1 104 0 1943 155 0 3 chr10 16359098 16359401 -129229887 + AluJo SINE Alu 1 302 -10 310 330 40 73 chr10 16359405 16359775 -129229513 + HERV16 LTR ERVL 1727 2084 -2912 810 253 76 28 chr10 16359780 16359979 -129229309 - L1MEc LINE L1 -4132 2264 2076 198 0 0 0 chr10 16359979 16360001 -129229287 + (TTTTA)n Simple_repeat Simple_repeat 1 22 0 2158 107 0 0 chr10 16360001 16360281 -129229007 - AluSx SINE Alu -32 280 1 810 253 76 28 chr10 16360281 16360436 -129228852 - L1MEc LINE L1 -4319 2077 1892 1943 108 57 0 chr10 16360668 16360878 -129228410 - AluSp SINE Alu 0 346 113 186 71 0 0 chr10 16360878 16360906 -129228382 + (TTA)n Simple_repeat Simple_repeat 1 28 0 1943 108 57 0 chr10 16360906 16361007 -129228281 - AluSp SINE Alu -233 113 19 2150 178 31 7 chr10 16361129 16361551 -129227737 + MSTB1 LTR MaLR 1 432 0 228 324 83 23 chr10 16361587 16361803 -129227485 + L1ME4a LINE L1 2676 2904 -3242 2901 13 0 0 chr10 16362287 16362604 -129226684 + AluYb8 SINE Alu 1 317 -1 676 133 0 25 chr10 16362696 16362816 -129226472 + LTR9B LTR ERV1 445 561 -83 648 302 65 10 chr10 16363248 16363632 -129225656 + L1ME4a LINE L1 3787 4191 -1955 30 45 0 0 chr10 16363901 16363945 -129225343 + AT_rich Low_complexity Low_complexity 1 44 0 1932 115 0 4 chr10 16364088 16364357 -129224931 + AluSg SINE Alu 39 306 -4 412 231 68 41 chr10 16364512 16364659 -129224629 + L1ME4a LINE L1 5546 5696 -425 287 209 86 79 chr10 16364689 16364828 -129224460 + L1ME4a LINE L1 5759 5898 -223 327 25 0 0 chr10 16364831 16364871 -129224417 + (TG)n Simple_repeat Simple_repeat 1 40 0 210 148 52 44 chr10 16366462 16366597 -129222691 + (TATATG)n Simple_repeat Simple_repeat 3 138 0 * 373 154 19 49 chr10 16366564 16366726 -129222562 + (TA)n Simple_repeat Simple_repeat 2 158 0 233 127 42 42 chr10 16366782 16366853 -129222435 + (CATATA)n Simple_repeat Simple_repeat 3 73 0 2283 101 33 56 chr10 16367037 16367279 -129222009 + L1PA16 LINE L1 5780 6011 -155 2244 126 0 0 chr10 16367279 16367589 -129221699 + AluSx SINE Alu 1 310 -2 2283 101 33 56 chr10 16367589 16367741 -129221547 + L1PA16 LINE L1 6011 6165 -1 1585 198 128 17 chr10 16369172 16369577 -129219711 - MER66A LTR ERV1 0 478 29 204 365 12 12 chr10 16369708 16369793 -129219495 + L2 LINE L2 3187 3271 -1 249 327 20 10 chr10 16370977 16371078 -129218210 + L2 LINE L2 2717 2818 -496 193 264 220 0 chr10 16371211 16371302 -129217986 + L2 LINE L2 3162 3272 0 2379 107 0 0 chr10 16371314 16371624 -129217664 - AluSp SINE Alu -3 310 1 1465 214 118 65 chr10 16371681 16372284 -129217004 + MLT1E2 LTR MaLR 1 626 0 185 0 0 39 chr10 16372311 16372337 -129216951 + (TG)n Simple_repeat Simple_repeat 2 26 0 5662 84 18 5 chr10 16373103 16373887 -129215401 + L1PA11 LINE L1 5379 6172 -2 1458 6 0 0 chr10 16375518 16375677 -129213611 - AluYb8 SINE Alu -13 305 147 2217 106 0 0 chr10 16375998 16376282 -129213006 - AluSx SINE Alu -28 284 1 278 180 0 0 chr10 16376377 16376427 -129212861 - MER53 DNA DNA -3 186 137 638 149 18 0 chr10 16376431 16376545 -129212743 - AluY SINE Alu -1 310 195 417 219 81 0 chr10 16376546 16376669 -129212619 - MER53 DNA DNA -55 134 2 199 294 103 15 chr10 16376695 16376763 -129212525 + L2 LINE L2 3181 3254 -18 212 308 0 0 chr10 16377561 16377613 -129211675 + (CA)n Simple_repeat Simple_repeat 2 53 0 330 252 118 24 chr10 16377656 16377816 -129211472 + L1ME LINE L1 5398 5597 -524 186 43 0 0 chr10 16377816 16377839 -129211449 + (TA)n Simple_repeat Simple_repeat 1 23 0 330 252 118 24 chr10 16377839 16377876 -129211412 + L1ME LINE L1 5597 5629 -492 25 0 0 0 chr10 16378344 16378369 -129210919 + AT_rich Low_complexity Low_complexity 1 25 0 2072 100 0 56 chr10 16378895 16379216 -129210072 - AluSg SINE Alu -7 303 1 364 356 148 5 chr10 16380220 16380422 -129208866 + L2 LINE L2 3022 3252 -20 234 0 0 0 chr10 16381233 16381259 -129208029 + (T)n Simple_repeat Simple_repeat 1 26 0 1411 222 10 3 chr10 16382128 16382421 -129206867 - AluJo SINE Alu -7 295 1 577 321 36 40 chr10 16382820 16382915 -129206373 + MIR SINE MIR 15 109 -153 2395 87 3 0 chr10 16382915 16383214 -129206074 - AluSx SINE Alu -12 300 1 577 321 36 40 chr10 16383214 16383367 -129205921 + MIR SINE MIR 109 262 0 444 328 8 0 chr10 16383510 16383632 -129205656 - L2 LINE L2 -4 3268 3146 235 338 51 36 chr10 16384185 16384460 -129204828 - L1MEd LINE L1 -5290 829 551 1054 230 28 92 chr10 16385123 16385486 -129203802 + MLT1A1 LTR MaLR 1 442 -25 2430 225 109 35 chr10 16385542 16386297 -129202991 - L1ME2 LINE L1 -178 5986 5103 2122 101 33 16 chr10 16386297 16386603 -129202685 - AluY SINE Alu 0 311 1 2430 225 109 35 chr10 16386603 16386982 -129202306 - L1ME2 LINE L1 -1061 5103 4754 2195 188 166 2 chr10 16387026 16387473 -129201815 - MLT2B1 LTR ERVL 0 520 1 702 222 24 147 chr10 16387473 16387531 -129201757 - L1ME2 LINE L1 -1420 4726 4662 2188 131 46 8 chr10 16387531 16387882 -129201406 + THE1B LTR MaLR 1 364 0 702 222 24 147 chr10 16387882 16388333 -129200955 - L1ME2 LINE L1 -1484 4662 4280 1218 115 13 18 chr10 16388357 16388583 -129200705 - L1HS LINE L1 -13 6142 5918 42929 33 24 1 chr10 16388683 16394051 -129195237 - L1P1 LINE L1 -654 5501 8 1103 248 123 45 chr10 16394064 16394689 -129194599 - L1ME2 LINE L1 -1905 4241 3568 10559 207 56 20 chr10 16394699 16398545 -129190743 - L1M4 LINE L1 -816 5566 1490 2075 127 0 0 chr10 16398545 16398829 -129190459 - AluSx SINE Alu -26 286 3 10559 207 56 20 chr10 16398829 16400085 -129189203 - L1M4 LINE L1 -4892 1490 280 356 261 35 26 chr10 16400091 16400206 -129189082 - MIR SINE MIR -26 236 121 23 0 0 0 chr10 16400651 16400674 -129188614 + AT_rich Low_complexity Low_complexity 1 23 0 307 369 16 0 chr10 16400905 16401027 -129188261 + L2 LINE L2 3187 3310 -3 22 35 0 0 chr10 16401585 16401614 -129187674 + AT_rich Low_complexity Low_complexity 1 29 0 317 325 79 9 chr10 16402075 16402189 -129187099 - L2 LINE L2 -8 3305 3184 354 80 0 0 chr10 16402197 16402247 -129187041 + (CCAA)n Simple_repeat Simple_repeat 2 51 0 375 285 66 53 chr10 16402492 16403305 -129185983 - L1MC5 LINE L1 -287 7674 7000 337 229 28 56 chr10 16403356 16403500 -129185788 - L1MC4 LINE L1 -975 7067 6928 782 279 9 23 chr10 16403663 16403882 -129185406 + MER58A DNA MER1_type 4 219 -5 2137 62 0 4 chr10 16404053 16404311 -129184977 + AluY SINE Alu 35 291 -20 5310 110 20 8 chr10 16404315 16405107 -129184181 - L1PA13 LINE L1 -21 6142 5341 1547 185 28 21 chr10 16405807 16406105 -129183183 - L1M3 LINE L1 -402 5766 5477 376 141 42 0 chr10 16406105 16406166 -129183122 + L1MB1 LINE L1 6094 6167 -1 1547 185 28 21 chr10 16406166 16406215 -129183073 - L1M3 LINE L1 -691 5477 5430 28 0 0 0 chr10 16407463 16407491 -129181797 + AT_rich Low_complexity Low_complexity 1 28 0 243 0 0 0 chr10 16407522 16407549 -129181739 + (T)n Simple_repeat Simple_repeat 1 27 0 362 239 9 0 chr10 16407664 16407777 -129181511 + (TCCA)n Simple_repeat Simple_repeat 1 114 0 987 176 0 6 chr10 16408228 16408387 -129180901 - FAM SINE Alu -17 158 1 374 263 86 53 chr10 16408388 16408667 -129180621 - L1ME LINE L1 -678 5488 5195 2771 184 35 32 chr10 16408933 16409526 -129179762 - L1MC3 LINE L1 -3 7782 7188 1984 152 0 3 chr10 16409532 16409834 -129179454 - AluSx SINE Alu -11 301 1 281 264 11 23 chr10 16409850 16409937 -129179351 - MLT1F1 LTR MaLR -442 125 40 282 47 70 0 chr10 16409937 16409980 -129179308 - L1MC3 LINE L1 -684 7101 7056 315 244 30 15 chr10 16410469 16410590 -129178698 + (TA)n Simple_repeat Simple_repeat 1 126 -11 1990 165 12 6 chr10 16410590 16410936 -129178352 - MER7A DNA MER2_type 0 346 1 315 244 30 15 chr10 16410936 16410949 -129178339 + (TA)n Simple_repeat Simple_repeat 126 137 0 2589 103 0 14 chr10 16411722 16412089 -129177199 - THE1B LTR MaLR -2 362 1 204 225 0 0 chr10 16413466 16413506 -129175782 + CT-rich Low_complexity Low_complexity 2 41 0 462 273 0 0 chr10 16413508 16413782 -129175506 + (TA)n Simple_repeat Simple_repeat 1 274 0 1830 163 3 10 chr10 16413992 16414287 -129175001 + AluJo SINE Alu 1 293 -19 303 250 25 0 chr10 16414320 16414400 -129174888 + MER103 DNA DNA 21 102 -64 1283 172 39 7 chr10 16415154 16415439 -129173849 + L1MA4 LINE L1 6000 6293 -7 734 228 12 12 chr10 16416218 16416385 -129172903 - MLT1E LTR MaLR -2 591 425 3628 201 34 18 chr10 16416715 16417562 -129171726 - L1MB8 LINE L1 -1 6177 5317 1803 199 21 3 chr10 16417714 16418086 -129171202 - L1MB8 LINE L1 -944 5202 4824 2256 113 0 0 chr10 16418706 16419006 -129170282 + AluSx SINE Alu 1 300 -12 5015 140 11 6 chr10 16419441 16420255 -129169033 - L1PA13 LINE L1 0 6163 5346 1313 27 0 0 chr10 16420472 16420618 -129168670 + AluYa5 SINE Alu 1 146 -165 322 344 80 0 chr10 16421070 16421195 -129168093 + MIR3 SINE MIR 32 166 -42 337 319 162 22 chr10 16423402 16423631 -129165657 + MIR SINE MIR 2 262 0 226 185 0 62 chr10 16423833 16423921 -129165367 + T-rich Low_complexity Low_complexity 3 137 0 2320 84 7 0 chr10 16424770 16425066 -129164222 - AluSq SINE Alu -15 298 1 247 160 60 0 chr10 16426100 16426150 -129163138 + MER103 DNA DNA 26 78 -88 418 300 41 59 chr10 16426278 16426448 -129162840 + MIR3 SINE MIR 36 202 -6 418 236 28 9 chr10 16426678 16426784 -129162504 + L2 LINE L2 2309 2416 -898 1678 214 28 33 chr10 16427202 16427594 -129161694 + MLT1B LTR MaLR 1 390 0 5391 129 21 10 chr10 16427622 16428458 -129160830 - Tigger1 DNA MER2_type 0 2418 1573 893 278 74 5 chr10 16428457 16428741 -129160547 + MLT1F LTR MaLR 8 351 -244 * 274 312 141 53 chr10 16429014 16429184 -129160104 - LTR16A1 LTR ERVL -247 210 26 303 301 91 21 chr10 16429211 16429354 -129159934 + L1 LINE L1 4015 4167 -1979 1572 156 51 32 chr10 16429578 16429893 -129159395 - MER44D DNA MER2_type -15 594 4 293 268 129 60 chr10 16430419 16431006 -129158282 - L1MC5 LINE L1 -26 7935 7308 274 300 183 6 chr10 16431031 16431287 -129158001 - L1MC4 LINE L1 -568 7474 7161 485 266 91 38 chr10 16431299 16431717 -129157571 - L1MEd LINE L1 -3056 3073 2634 1052 179 0 0 chr10 16432229 16432408 -129156880 - AluJb SINE Alu -5 307 129 307 280 0 0 chr10 16432508 16432583 -129156705 + MIR SINE MIR 73 147 -115 236 217 0 0 chr10 16432603 16432649 -129156639 + Alu SINE Alu 13 58 -108 299 212 159 9 chr10 16432675 16432788 -129156500 - MIR SINE MIR -5 257 128 309 258 104 18 chr10 16432830 16432993 -129156295 + L1MEd LINE L1 8 184 -5935 21 0 0 0 chr10 16433201 16433222 -129156066 + AT_rich Low_complexity Low_complexity 1 21 0 643 268 73 30 chr10 16433246 16433794 -129155494 - L1MEd LINE L1 -4808 1502 896 238 24 0 49 chr10 16433905 16433946 -129155342 + (TTTTTG)n Simple_repeat Simple_repeat 4 42 0 507 316 66 81 chr10 16433977 16434509 -129154779 - L1MEd LINE L1 -5479 640 117 27946 86 7 12 chr10 16434565 16440738 -129148550 - L1PA6 LINE L1 -8 6146 11 195 42 0 0 chr10 16440753 16440777 -129148511 + (T)n Simple_repeat Simple_repeat 1 24 0 908 196 12 6 chr10 16442735 16442908 -129146380 - FAM SINE Alu -1 174 1 280 207 18 0 chr10 16442913 16443024 -129146264 + (TA)n Simple_repeat Simple_repeat 2 114 0 2293 85 0 0 chr10 16443024 16443307 -129145981 - AluSc SINE Alu -26 283 1 1268 227 43 32 chr10 16444097 16444472 -129144816 - MLT1B LTR MaLR -11 379 1 633 233 125 22 chr10 16444472 16444704 -129144584 - L1MC4 LINE L1 -466 7576 7321 667 357 38 20 chr10 16444742 16445190 -129144098 + HERV16 LTR ERVL 1070 1525 -3471 691 341 74 22 chr10 16445225 16445498 -129143790 - LTR16A LTR ERVL 0 450 148 1709 215 83 32 chr10 16445498 16445990 -129143298 - MLT2B1 LTR ERVL -1 519 3 691 341 74 22 chr10 16445990 16446121 -129143167 - LTR16A LTR ERVL -302 148 25 653 299 40 18 chr10 16446274 16446552 -129142736 - HERV16 LTR ERVL -4108 888 605 1228 161 5 0 chr10 16446653 16446839 -129142449 - AluSq SINE Alu -124 189 3 2472 66 0 3 chr10 16448036 16448339 -129140949 + AluY SINE Alu 5 306 -5 1649 217 3 3 chr10 16448505 16448804 -129140484 + AluJo SINE Alu 1 299 -13 904 197 44 6 chr10 16449595 16449778 -129139510 - AluJb SINE Alu -22 290 101 201 299 122 54 chr10 16450504 16450651 -129138637 - MIR SINE MIR -42 220 64 21 57 0 0 chr10 16450751 16450786 -129138502 + AT_rich Low_complexity Low_complexity 1 35 0 245 275 66 0 chr10 16450882 16450973 -129138315 + L1ME4a LINE L1 5486 5582 -660 373 304 92 29 chr10 16451116 16451323 -129137965 + L1ME4a LINE L1 5701 5920 -201 403 278 90 33 chr10 16451520 16451732 -129137556 - L2 LINE L2 0 3313 3090 197 356 98 23 chr10 16451885 16452017 -129137271 - L2 LINE L2 -408 2906 2765 3259 224 48 16 chr10 16452051 16452293 -129136995 + L1ME1 LINE L1 4382 4615 -1551 2150 113 0 17 chr10 16452293 16452594 -129136694 - AluSq SINE Alu -17 296 1 3259 224 48 16 chr10 16452594 16454082 -129135206 + L1ME1 LINE L1 4615 6162 -4 1740 109 34 69 chr10 16455397 16455443 -129133845 - L1PA15 LINE L1 0 6165 6119 2434 110 31 11 chr10 16455443 16455799 -129133489 + THE1B LTR MaLR 1 363 -1 1740 109 34 69 chr10 16455799 16456072 -129133216 - L1PA15 LINE L1 -46 6119 5857 2166 115 0 10 chr10 16456690 16456995 -129132293 - AluSc SINE Alu -7 302 1 253 276 263 6 chr10 16457026 16457182 -129132106 + MIR SINE MIR 54 249 -13 2190 56 0 0 chr10 16457825 16458092 -129131196 + AluY SINE Alu 44 310 -1 21 0 0 0 chr10 16458905 16458926 -129130362 + AT_rich Low_complexity Low_complexity 1 21 0 217 354 9 26 chr10 16461198 16461311 -129127977 - MIR3 SINE MIR -15 193 83 1595 194 31 0 chr10 16461316 16461610 -129127678 + AluJo SINE Alu 1 303 -9 2236 121 0 0 chr10 16462127 16462424 -129126864 + AluSx SINE Alu 1 297 -15 28 48 0 0 chr10 16462473 16462515 -129126773 + AT_rich Low_complexity Low_complexity 1 42 0 1337 237 74 4 chr10 16462589 16463075 -129126213 + L1M4 LINE L1 2615 3134 -3012 1276 234 45 32 chr10 16463074 16463539 -129125749 + L1MA9 LINE L1 5801 6271 -41 * 1111 244 95 5 chr10 16463571 16464085 -129125203 + L1M4 LINE L1 3141 3749 -2397 689 190 259 62 chr10 16464366 16464671 -129124617 + MLT1A1 LTR MaLR 1 365 0 270 136 0 0 chr10 16464726 16464770 -129124518 + (CA)n Simple_repeat Simple_repeat 2 45 0 675 291 112 0 chr10 16465280 16465503 -129123785 + MIR SINE MIR 3 250 -12 369 0 0 0 chr10 16467263 16467304 -129121984 + (CA)n Simple_repeat Simple_repeat 2 42 0 191 280 0 20 chr10 16467397 16467447 -129121841 - L2 LINE L2 -1 3271 3223 180 292 0 0 chr10 16467444 16467492 -129121796 - L2 LINE L2 -16 3297 3250 * 268 298 124 0 chr10 16467951 16468072 -129121216 + MIR SINE MIR 57 192 -70 2053 138 0 22 chr10 16468110 16468421 -129120867 + AluSx SINE Alu 1 304 -8 337 289 85 81 chr10 16470200 16470446 -129118842 + L1MC4a LINE L1 5689 5935 -1873 240 313 31 0 chr10 16470625 16470753 -129118535 + L1ME LINE L1 5601 5732 -389 204 135 0 0 chr10 16470903 16470940 -129118348 + (TA)n Simple_repeat Simple_repeat 1 37 0 373 175 93 0 chr10 16470980 16471077 -129118211 + L1ME4a LINE L1 6013 6118 -3 2847 7 0 0 chr10 16471236 16471544 -129117744 - AluYa5 SINE Alu -3 308 1 21 0 0 0 chr10 16471547 16471568 -129117720 + AT_rich Low_complexity Low_complexity 1 21 0 1725 204 0 3 chr10 16471651 16471936 -129117352 - AluJo SINE Alu -22 290 7 208 121 0 0 chr10 16472144 16472177 -129117111 + (TG)n Simple_repeat Simple_repeat 2 34 0 1170 114 0 0 chr10 16472427 16472594 -129116694 + AluSx SINE Alu 23 189 -123 25 68 5 0 chr10 16472907 16473019 -129116269 + AT_rich Low_complexity Low_complexity 1 67 0 2260 104 0 0 chr10 16473052 16473350 -129115938 - AluY SINE Alu -13 298 1 922 266 21 21 chr10 16474241 16474575 -129114713 + MARNA DNA Mariner 187 520 -66 305 277 32 32 chr10 16474788 16474943 -129114345 + L1ME LINE L1 5698 5852 -318 532 222 70 22 chr10 16475377 16475562 -129113726 + MER3 DNA MER1_type 16 209 0 29 70 0 0 chr10 16475731 16475788 -129113500 + AT_rich Low_complexity Low_complexity 1 57 0 180 268 196 0 chr10 16476109 16476165 -129113123 - MIR SINE MIR -61 147 81 1511 255 52 43 chr10 16476294 16476315 -129112973 - MLT1F LTR MaLR 0 542 523 2157 151 11 0 chr10 16476315 16476666 -129112622 - THE1A LTR MaLR 0 355 1 1511 255 52 43 chr10 16476666 16476991 -129112297 - MLT1F LTR MaLR -19 523 187 225 0 0 0 chr10 16476991 16477016 -129112272 + (GA)n Simple_repeat Simple_repeat 2 26 0 1511 255 52 43 chr10 16477016 16477205 -129112083 - MLT1F LTR MaLR -355 187 1 183 314 67 19 chr10 16477489 16477594 -129111694 + L2 LINE L2 1325 1434 -1880 1025 115 0 0 chr10 16479028 16479167 -129110121 + AluSq/x SINE Alu 1 139 -173 353 164 0 0 chr10 16479169 16479230 -129110058 + Alu SINE Alu 234 294 -8 503 328 80 43 chr10 16479296 16479622 -129109666 + L2 LINE L2 2637 2974 -340 368 314 34 0 chr10 16479675 16479793 -129109495 + L2 LINE L2 3192 3313 0 329 330 96 75 chr10 16480003 16480523 -129108765 + L2 LINE L2 2712 3269 -3 21 0 0 0 chr10 16480738 16480759 -129108529 + AT_rich Low_complexity Low_complexity 1 21 0 236 308 0 0 chr10 16481054 16481119 -129108169 + MIR SINE MIR 83 147 -61 2453 51 3 0 chr10 16482301 16482597 -129106691 + AluY SINE Alu 1 297 -14 4959 172 14 35 chr10 16482598 16483586 -129105702 - L1MB1 LINE L1 -7 6161 5154 706 97 44 0 chr10 16483586 16483699 -129105589 + L1PA13 LINE L1 6046 6163 0 4959 172 14 35 chr10 16483699 16483766 -129105522 - L1MB1 LINE L1 -1014 5154 5087 2332 105 0 0 chr10 16483766 16484070 -129105218 - AluSq SINE Alu -1 312 9 4959 172 14 35 chr10 16484070 16484568 -129104720 - L1MB1 LINE L1 -1081 5087 4653 1225 107 34 11 chr10 16484568 16484745 -129104543 - AluSg SINE Alu -129 181 1 637 322 19 0 chr10 16484902 16485107 -129104181 + MLT1I LTR MaLR 198 406 -3 340 307 35 95 chr10 16485156 16485385 -129103903 + MIR SINE MIR 47 261 -1 467 279 31 0 chr10 16485652 16485781 -129103507 + L2 LINE L2 1491 1623 -1691 2720 202 49 25 chr10 16486342 16486972 -129102316 - MER82 DNA MER2_type -8 645 1 1757 159 130 29 chr10 16487284 16487700 -129101588 - MLT2B1 LTR ERVL -62 458 1 2959 322 73 24 chr10 16488242 16488348 -129100940 + L2 LINE L2 107 206 -3108 2487 121 0 11 chr10 16488348 16488727 -129100561 + THE1C LTR MaLR 1 375 0 2959 322 73 24 chr10 16488727 16490067 -129099221 + L2 LINE L2 206 1623 -1691 369 0 0 0 chr10 16490528 16490569 -129098719 + (TG)n Simple_repeat Simple_repeat 2 42 0 318 271 169 0 chr10 16491802 16491920 -129097368 - L2 LINE L2 -5 3308 3171 330 232 0 0 chr10 16492111 16492167 -129097121 + LTR67 LTR ERVL 113 168 -389 455 235 110 7 chr10 16492273 16492409 -129096879 + LTR67 LTR ERVL 360 509 -48 1588 172 49 0 chr10 16492845 16493112 -129096176 - AluJb SINE Alu -12 300 21 326 154 0 15 chr10 16493142 16493207 -129096081 + (CATATA)n Simple_repeat Simple_repeat 3 66 0 5681 49 11 0 chr10 16493208 16493916 -129095372 - L1PA4 LINE L1 -11 6144 5429 3403 33 0 0 chr10 16493916 16494372 -129094916 + L1PA4 LINE L1 4976 5431 -723 901 259 37 27 chr10 16494603 16494897 -129094391 - L1MC4a LINE L1 -1917 5891 5595 2830 13 0 0 chr10 16494919 16495230 -129094058 - AluYa5 SINE Alu 0 311 1 21 0 0 0 chr10 16495233 16495254 -129094034 + AT_rich Low_complexity Low_complexity 1 21 0 1688 204 0 3 chr10 16495337 16495622 -129093666 - AluJo SINE Alu -22 290 7 208 121 0 0 chr10 16495830 16495863 -129093425 + (TG)n Simple_repeat Simple_repeat 2 34 0 1175 114 0 0 chr10 16496113 16496280 -129093008 + AluSx SINE Alu 23 189 -123 25 68 5 0 chr10 16496593 16496705 -129092583 + AT_rich Low_complexity Low_complexity 1 67 0 2249 104 0 0 chr10 16496738 16497036 -129092252 - AluY SINE Alu -13 298 1 1018 266 21 21 chr10 16497927 16498261 -129091027 + MARNA DNA Mariner 187 520 -66 231 311 67 25 chr10 16498354 16498473 -129090815 - LTR40b LTR ERVL -338 124 1 347 278 43 30 chr10 16498474 16498661 -129090627 + L1ME3A LINE L1 5695 5895 -271 588 222 70 22 chr10 16499063 16499248 -129090040 + MER3 DNA MER1_type 16 209 0 29 70 0 0 chr10 16499417 16499474 -129089814 + AT_rich Low_complexity Low_complexity 1 57 0 182 268 196 0 chr10 16499795 16499851 -129089437 - MIR SINE MIR -61 147 81 1677 255 52 43 chr10 16499980 16500001 -129089287 - MLT1F LTR MaLR 0 542 523 2160 151 11 0 chr10 16500001 16500352 -129088936 - THE1A LTR MaLR 0 355 1 1677 255 52 43 chr10 16500352 16500677 -129088611 - MLT1F LTR MaLR -19 523 187 225 0 0 0 chr10 16500677 16500702 -129088586 + (GA)n Simple_repeat Simple_repeat 2 26 0 1677 255 52 43 chr10 16500702 16500891 -129088397 - MLT1F LTR MaLR -355 187 1 183 314 67 19 chr10 16501175 16501280 -129088008 + L2 LINE L2 1325 1434 -1880 1012 115 0 0 chr10 16502795 16502934 -129086354 + AluSq/x SINE Alu 1 139 -173 373 164 0 0 chr10 16502936 16502997 -129086291 + Alu SINE Alu 234 294 -8 485 328 80 43 chr10 16503063 16503389 -129085899 + L2 LINE L2 2637 2974 -340 370 314 34 0 chr10 16503442 16503560 -129085728 + L2 LINE L2 3192 3313 0 327 330 96 75 chr10 16503770 16504290 -129084998 + L2 LINE L2 2712 3269 -3 21 0 0 0 chr10 16504505 16504526 -129084762 + AT_rich Low_complexity Low_complexity 1 21 0 234 308 0 0 chr10 16504821 16504886 -129084402 + MIR SINE MIR 83 147 -61 2458 51 3 0 chr10 16506068 16506364 -129082924 + AluY SINE Alu 1 297 -14 5245 169 15 31 chr10 16506365 16507353 -129081935 - L1MB1 LINE L1 -7 6161 5159 711 97 44 0 chr10 16507353 16507466 -129081822 + L1PA13 LINE L1 6046 6163 0 5245 169 15 31 chr10 16507466 16507533 -129081755 - L1MB1 LINE L1 -1009 5159 5092 2306 105 0 0 chr10 16507533 16507837 -129081451 - AluSq SINE Alu -1 312 9 5245 169 15 31 chr10 16507837 16508613 -129080675 - L1MB1 LINE L1 -1076 5092 4369 471 335 116 9 chr10 16508747 16508971 -129080317 - MIR SINE MIR -6 256 9 375 314 23 41 chr10 16509244 16509416 -129079872 - MIR3 SINE MIR -14 194 26 1852 137 18 36 chr10 16509596 16509931 -129079357 + L1PA16 LINE L1 5835 6163 -3 413 90 0 45 chr10 16510157 16510224 -129079064 - L1PA13 LINE L1 -11 6152 6089 1112 146 38 42 chr10 16510412 16510673 -129078615 + L1MA1 LINE L1 6031 6290 -12 32 26 0 0 chr10 16510675 16510714 -129078574 + AT_rich Low_complexity Low_complexity 1 39 0 378 0 0 0 chr10 16510819 16510861 -129078427 + (CA)n Simple_repeat Simple_repeat 1 42 0 22 56 0 0 chr10 16511825 16511861 -129077427 + AT_rich Low_complexity Low_complexity 1 36 0 570 311 109 8 chr10 16512833 16513071 -129076217 + MIR SINE MIR 1 262 0 284 250 60 17 chr10 16513302 16513418 -129075870 + L1MCc LINE L1 30 150 -6273 1219 254 82 28 chr10 16513422 16513968 -129075320 + L1MCc LINE L1 1035 1633 -4887 1453 254 75 64 chr10 16513983 16515367 -129073921 + L1MCc LINE L1 2291 3653 -3288 * 1774 245 45 21 chr10 16515361 16515990 -129073298 + L1M4 LINE L1 4724 5367 -779 432 291 80 19 chr10 16515992 16516413 -129072875 + L1ME1 LINE L1 1395 1996 -4829 929 158 0 0 chr10 16516416 16516562 -129072726 - L1PB4 LINE L1 -7 6149 6004 661 179 8 8 chr10 16516884 16517007 -129072281 + FLAM_C SINE Alu 1 123 -20 595 308 56 15 chr10 16517065 16517635 -129071653 + L1ME1 LINE L1 2462 3015 -3629 382 273 45 64 chr10 16517797 16518061 -129071227 - L1ME1 LINE L1 -2195 4449 4191 910 272 129 36 chr10 16518061 16518704 -129070584 + L1ME1 LINE L1 4450 5152 -1492 542 292 151 31 chr10 16519145 16519443 -129069845 + L1ME1 LINE L1 5771 6032 -634 1598 191 90 0 chr10 16519443 16519778 -129069510 + MER47A DNA MER2_type 2 366 0 542 292 151 31 chr10 16519778 16520040 -129069248 + L1ME1 LINE L1 6032 6385 -281 356 303 111 59 chr10 16520599 16521071 -129068217 - L2 LINE L2 -883 2431 1985 4114 114 3 5 chr10 16521071 16521692 -129067596 + L1PA14 LINE L1 5535 6154 -7 225 0 0 0 chr10 16521692 16521717 -129067571 + (CA)n Simple_repeat Simple_repeat 2 26 0 356 303 111 59 chr10 16521717 16521765 -129067523 - L2 LINE L2 -1328 1986 1883 1540 153 4 7 chr10 16521936 16522217 -129067071 + L1PA14 LINE L1 5875 6154 -7 225 0 0 0 chr10 16522217 16522242 -129067046 + (CA)n Simple_repeat Simple_repeat 2 26 0 736 143 0 0 chr10 16523405 16523510 -129065778 - AluSq/x SINE Alu -208 105 1 1711 177 0 24 chr10 16523759 16524047 -129065241 + AluJo SINE Alu 1 281 -31 314 329 63 50 chr10 16524348 16524570 -129064718 + L3 LINE CR1 1322 1546 -31 1777 238 60 7 chr10 16525343 16525571 -129063717 - MLT1D LTR MaLR 0 505 291 1667 108 67 131 chr10 16525571 16525959 -129063329 + THE1B LTR MaLR 1 363 -1 1777 238 60 7 chr10 16525959 16526146 -129063142 - MLT1D LTR MaLR -214 291 68 227 109 196 0 chr10 16526150 16526196 -129063092 + MADE1 DNA Mariner 1 55 -25 245 170 0 0 chr10 16526321 16526368 -129062920 - MADE1 DNA Mariner -33 47 1 251 257 9 24 chr10 16528119 16528297 -129060991 + GA-rich Low_complexity Low_complexity 1 175 0 429 193 8 9 chr10 16529733 16529823 -129059465 - MER58A DNA MER1_type -17 90 1 611 162 10 0 chr10 16530014 16530113 -129059175 - MER66B LTR ERV1 -7 479 380 7368 37 7 0 chr10 16530129 16531021 -129058267 - L1PA5 LINE L1 -3 6151 5254 826 208 117 10 chr10 16531025 16531222 -129058066 - MER66A LTR ERV1 -92 386 169 467 170 57 92 chr10 16531198 16531339 -129057949 - MER41A LTR ERV1 -252 302 167 * 298 121 0 69 chr10 16532156 16532214 -129057074 + MIR SINE MIR 121 174 -88 1921 176 0 0 chr10 16533657 16533969 -129055319 + AluJb SINE Alu 1 312 0 275 236 39 94 chr10 16534055 16534182 -129055106 + MER94 DNA DNA 1 120 -14 425 372 54 4 chr10 16534408 16534647 -129054641 + HAL1b LINE L1 671 921 -427 22 0 0 0 chr10 16534800 16534822 -129054466 + AT_rich Low_complexity Low_complexity 1 22 0 524 283 167 32 chr10 16534918 16535130 -129054158 + L1MC/D LINE L1 5272 5541 -2267 2891 152 22 2 chr10 16535130 16535638 -129053650 - L1MC1 LINE L1 -1 6332 5815 524 283 167 32 chr10 16535638 16535736 -129053552 + L1MC/D LINE L1 5541 5624 -2184 2041 145 0 7 chr10 16536016 16536313 -129052975 + AluJb SINE Alu 1 295 -17 187 200 22 0 chr10 16536359 16536404 -129052884 - L2 LINE L2 0 3313 3268 4814 222 97 48 chr10 16538374 16538464 -129050824 - L1MDa LINE L1 -4352 2188 2104 1773 186 42 0 chr10 16538464 16538797 -129050491 + MER7A DNA MER2_type 1 345 -1 4814 222 97 48 chr10 16538797 16539558 -129049730 - L1MDa LINE L1 -4436 2104 1382 1470 183 60 30 chr10 16539558 16539858 -129049430 - AluJb SINE Alu -3 309 1 4814 222 97 48 chr10 16539858 16539933 -129049355 - L1MDa LINE L1 -5158 1382 1312 1780 126 26 19 chr10 16539933 16540204 -129049084 - AluJb SINE Alu -21 291 19 1080 150 0 23 chr10 16540049 16540222 -129049066 - AluJb SINE Alu -143 169 1 * 4814 222 97 48 chr10 16540222 16541103 -129048185 - L1MDa LINE L1 -5246 1294 459 288 0 0 0 chr10 16541103 16541135 -129048153 + (TTG)n Simple_repeat Simple_repeat 2 33 0 1718 180 0 23 chr10 16541137 16541437 -129047851 - AluSx SINE Alu -19 293 1 4814 222 97 48 chr10 16541437 16541539 -129047749 - L1MDa LINE L1 -6081 459 13 413 351 59 28 chr10 16541614 16541902 -129047386 - HAL1b LINE L1 -613 735 439 2273 175 24 14 chr10 16544657 16545079 -129044209 + MSTB LTR MaLR 1 426 0 1696 16 0 0 chr10 16545486 16545680 -129043608 + L1PA3 LINE L1 5962 6155 0 867 205 51 0 chr10 16546353 16546548 -129042740 - Tigger1 DNA MER2_type -2213 205 1 2189 208 46 7 chr10 16546553 16547097 -129042191 - L1MCa LINE L1 -5842 584 20 2292 100 0 3 chr10 16547319 16547629 -129041659 - AluSc SINE Alu 0 309 1 964 79 0 0 chr10 16547858 16547985 -129041303 - AluY SINE Alu -184 127 1 3217 208 51 11 chr10 16547986 16549364 -129039924 - L1M4 LINE L1 -400 5778 4348 4057 138 17 9 chr10 16549383 16549546 -129039742 - L1PA16 LINE L1 -1 6165 6005 2512 94 0 76 chr10 16549546 16549940 -129039348 - THE1B LTR MaLR 0 364 1 4057 138 17 9 chr10 16549940 16550471 -129038817 - L1PA16 LINE L1 -161 6005 5465 1255 219 52 39 chr10 16550471 16550920 -129038368 + MLT2B1 LTR ERVL 2 509 -11 3025 250 42 4 chr10 16550948 16551704 -129037584 + ERVL-B1 LTR ERVL 27 811 -4953 249 122 0 75 chr10 16551704 16551777 -129037511 - L1M4 LINE L1 -2220 3926 3859 1848 257 67 19 chr10 16551779 16551793 -129037495 - L1M4 LINE L1 -2937 3209 3197 2572 80 26 0 chr10 16551793 16552144 -129037144 + L1PA13 LINE L1 5803 6162 -1 1848 257 67 19 chr10 16552144 16553078 -129036210 - L1M4 LINE L1 -2949 3197 2215 414 264 72 47 chr10 16553292 16553341 -129035947 - L1M4 LINE L1 -2952 3194 3148 890 185 14 28 chr10 16553341 16553557 -129035731 - L1MA10 LINE L1 -13 6321 6109 414 264 72 47 chr10 16553557 16553742 -129035546 - L1M4 LINE L1 -2998 3148 2954 2476 77 0 6 chr10 16554815 16555127 -129034161 - AluY SINE Alu -1 310 1 666 298 54 6 chr10 16555136 16555468 -129033820 - L1M4 LINE L1 -3265 2881 2534 630 140 19 121 chr10 16555468 16555625 -129033663 - MER6 DNA MER2_type 0 865 4 24 0 0 0 chr10 16555928 16555952 -129033336 + AT_rich Low_complexity Low_complexity 1 24 0 384 306 165 6 chr10 16556007 16556177 -129033111 + MIR SINE MIR 18 214 -48 1882 171 0 10 chr10 16556217 16556522 -129032766 - AluJb SINE Alu -9 303 2 1965 122 16 36 chr10 16557733 16558037 -129031251 - AluSg SINE Alu -12 298 1 942 298 116 17 chr10 16559149 16559502 -129029786 - L2 LINE L2 -2719 595 208 1867 147 7 17 chr10 16559898 16560198 -129029090 + AluSx SINE Alu 1 297 -15 239 313 31 0 chr10 16560503 16560567 -129028721 + (CATG)n Simple_repeat Simple_repeat 2 67 0 792 143 16 0 chr10 16561097 16561223 -129028065 + BC200 scRNA scRNA 2 129 -71 219 36 0 0 chr10 16561225 16561253 -129028035 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 2214 96 0 0 chr10 16562427 16562718 -129026570 + AluSg SINE Alu 1 291 -19 1100 199 111 20 chr10 16562723 16563075 -129026213 + L1MB8 LINE L1 5780 6163 -15 6132 154 52 87 chr10 16563141 16563255 -129026033 + L1MCa LINE L1 20 136 -6290 3808 29 0 0 chr10 16563255 16563704 -129025584 + L1PA4 LINE L1 5704 6152 -3 6132 154 52 87 chr10 16563704 16564779 -129024509 + L1MCa LINE L1 136 1147 -5279 1640 43 10 0 chr10 16564779 16565020 -129024268 + L1PA4 LINE L1 5938 6180 0 6132 154 52 87 chr10 16565020 16565358 -129023930 + L1MCa LINE L1 1147 1495 -4931 335 274 42 0 chr10 16565420 16565515 -129023773 + L1MCa LINE L1 2636 2734 -3873 2366 93 0 0 chr10 16566402 16566704 -129022584 + AluSg SINE Alu 1 302 -8 180 0 0 0 chr10 16566810 16566830 -129022458 + (TTTAA)n Simple_repeat Simple_repeat 1 20 0 3022 93 7 2 chr10 16566830 16567259 -129022029 - L1PA10 LINE L1 -21 6147 5717 287 262 79 43 chr10 16567283 16567447 -129021841 - MLT1L LTR MaLR -13 602 433 281 233 0 0 chr10 16567837 16567897 -129021391 + MLT1I LTR MaLR 93 152 -257 283 349 48 18 chr10 16567958 16568124 -129021164 + MLT1J2 LTR MaLR 241 411 -39 1166 157 0 0 chr10 16568149 16568327 -129020961 - AluSg/x SINE Alu -1 309 132 4161 94 14 2 chr10 16568363 16568950 -129020338 + L1PA10 LINE L1 5575 6168 0 1278 142 5 19 chr10 16568955 16569166 -129020122 + AluSg/x SINE Alu 81 288 -24 570 236 54 49 chr10 16569211 16569531 -129019757 + MSTD LTR MaLR 1 324 -41 581 178 25 0 chr10 16569720 16569838 -129019450 + MSTD LTR MaLR 276 396 0 7313 39 0 0 chr10 16569882 16571154 -129018134 - L1PA4 LINE L1 -8 6147 4874 255 93 0 0 chr10 16571712 16571755 -129017533 + (A)n Simple_repeat Simple_repeat 1 43 0 3996 200 11 55 chr10 16571987 16572877 -129016411 + L1 LINE L1 3320 4248 -1898 5881 115 13 6 chr10 16572877 16573196 -129016092 + L1PA14 LINE L1 4869 5184 -977 224 29 0 29 chr10 16573196 16573230 -129016058 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 5881 115 13 6 chr10 16573230 16573878 -129015410 + L1PA14 LINE L1 5184 5839 -322 2517 71 0 3 chr10 16573878 16574189 -129015099 + AluY SINE Alu 1 310 -1 5881 115 13 6 chr10 16574189 16574511 -129014777 + L1PA14 LINE L1 5839 6157 -4 3996 200 11 55 chr10 16574511 16574666 -129014622 + L1 LINE L1 4248 4318 -1828 1348 290 20 26 chr10 16574839 16575294 -129013994 + L1M3a LINE L1 1 452 -5503 1514 304 71 34 chr10 16575408 16576427 -129012861 + L1M3a LINE L1 302 1038 -4917 2094 135 0 0 chr10 16576460 16576749 -129012539 + AluSx SINE Alu 2 290 -22 879 200 0 0 chr10 16577760 16577920 -129011368 + L1PB4 LINE L1 5992 6151 -5 422 295 16 0 chr10 16578302 16578424 -129010864 - MLT1I LTR MaLR -219 190 67 2725 42 0 0 chr10 16578583 16578894 -129010394 + AluY SINE Alu 1 311 0 2085 133 0 0 chr10 16578899 16579216 -129010072 + L1PA14 LINE L1 5841 6157 -4 929 196 27 9 chr10 16579218 16579443 -129009845 + L1M3 LINE L1 4162 4390 -1756 1943 161 65 13 chr10 16579459 16579910 -129009378 + L1M3 LINE L1 5197 5673 -495 1254 136 54 54 chr10 16579915 16580194 -129009094 - Tigger2a DNA MER2_type -155 279 1 256 393 34 0 chr10 16580237 16580354 -129008934 + L2 LINE L2 3151 3271 -1 1726 135 0 43 chr10 16580753 16581078 -129008210 + L1MB1 LINE L1 5660 5970 -198 3464 221 69 10 chr10 16581081 16582805 -129006483 + L1PA11 LINE L1 4295 6154 -20 2323 124 13 3 chr10 16582806 16583184 -129006104 + L1PB2 LINE L1 5768 6149 -2 805 201 5 82 chr10 16583196 16583366 -129005922 + L1MB1 LINE L1 5966 6117 -51 1834 176 0 0 chr10 16583366 16583667 -129005621 + AluJo SINE Alu 9 309 -3 805 201 5 82 chr10 16583667 16583715 -129005573 + L1MB1 LINE L1 6117 6167 -1 269 192 0 68 chr10 16584475 16584548 -129004740 + (TATG)n Simple_repeat Simple_repeat 2 69 0 31 58 0 0 chr10 16584768 16584820 -129004468 + AT_rich Low_complexity Low_complexity 1 52 0 23 0 0 0 chr10 16584881 16584904 -129004384 + AT_rich Low_complexity Low_complexity 1 23 0 363 327 77 14 chr10 16585005 16585302 -129003986 + L1ME1 LINE L1 35 350 -6046 2131 147 0 0 chr10 16585414 16585727 -129003561 + AluSq SINE Alu 1 313 0 4242 220 47 23 chr10 16585891 16587256 -129002032 + L1ME1 LINE L1 3004 4401 -1814 1795 233 70 7 chr10 16587328 16587882 -129001406 + L1ME1 LINE L1 5643 6231 -4 380 295 16 0 chr10 16587910 16588039 -129001249 + L1ME2 LINE L1 3951 4081 -2065 600 228 54 81 chr10 16588055 16588217 -129001071 + L1ME2 LINE L1 5078 5243 -921 4433 23 0 0 chr10 16588217 16588734 -129000554 + L1PA3 LINE L1 5637 6153 -2 600 228 54 81 chr10 16588734 16588979 -129000309 + L1ME2 LINE L1 5243 5472 -692 * 1143 263 34 0 chr10 16588976 16589326 -128999962 + L1ME2 LINE L1 5727 6088 -76 601 289 69 39 chr10 16589381 16589745 -128999543 + L1MC/D LINE L1 5422 5796 -2012 21 82 0 0 chr10 16589955 16590004 -128999284 + AT_rich Low_complexity Low_complexity 1 49 0 327 256 58 44 chr10 16590509 16590646 -128998642 + L1M4 LINE L1 3685 3823 -2323 253 340 44 19 chr10 16591063 16591269 -128998019 + ERVL LTR ERVL 1765 1975 -3789 1144 220 138 40 chr10 16591789 16592194 -128997094 + MSTB2 LTR MaLR 1 445 -12 305 287 57 25 chr10 16592710 16592832 -128996456 + L1MEd LINE L1 976 1101 -5018 2155 86 0 0 chr10 16592891 16593159 -128996129 + AluSc SINE Alu 23 290 -19 1940 112 0 4 chr10 16593329 16593598 -128995690 + AluSc SINE Alu 23 290 -19 348 306 50 0 chr10 16593598 16593712 -128995576 + L1MEd LINE L1 1080 1202 -4929 879 245 102 71 chr10 16593734 16594434 -128994854 - L1MDa LINE L1 -4268 2854 2046 1667 207 3 10 chr10 16594434 16594739 -128994549 - AluJo SINE Alu -7 305 3 879 245 102 71 chr10 16594739 16595093 -128994195 - L1MDa LINE L1 -5076 2046 1704 240 326 23 23 chr10 16595264 16595436 -128993852 - L1MDa LINE L1 -5072 1351 1180 372 43 0 0 chr10 16595540 16595586 -128993702 + (TC)n Simple_repeat Simple_repeat 1 46 0 399 340 95 42 chr10 16596172 16596413 -128992875 + MIR SINE MIR 9 262 0 420 111 0 0 chr10 16598242 16598305 -128990983 + (TA)n Simple_repeat Simple_repeat 2 64 0 22 35 0 0 chr10 16598359 16598388 -128990900 + AT_rich Low_complexity Low_complexity 1 29 0 477 248 72 8 chr10 16598794 16598919 -128990369 - MIR SINE MIR -13 249 117 569 258 6 53 chr10 16599582 16599791 -128989497 + MIR SINE MIR 20 217 -45 1790 103 3 142 chr10 16600378 16600738 -128988550 + AluSg SINE Alu 1 310 0 24 53 0 0 chr10 16601466 16601504 -128987784 + AT_rich Low_complexity Low_complexity 1 38 0 2294 101 3 0 chr10 16601824 16602122 -128987166 - AluSq SINE Alu -14 299 1 2086 203 8 51 chr10 16602181 16602504 -128986784 + MLT1D LTR MaLR 1 294 -211 1343 112 4 116 chr10 16602504 16602663 -128986625 + MER30 DNA MER1_type 1 122 -108 2215 102 0 20 chr10 16602663 16602967 -128986321 + AluSx SINE Alu 4 301 -11 1343 112 4 116 chr10 16602967 16603065 -128986223 + MER30 DNA MER1_type 122 229 -1 2086 203 8 51 chr10 16603065 16603269 -128986019 + MLT1D LTR MaLR 294 505 0 22 0 0 0 chr10 16603350 16603372 -128985916 + GC_rich Low_complexity Low_complexity 1 22 0 377 269 84 42 chr10 16604062 16604229 -128985059 + MIR SINE MIR 79 252 -10 762 172 8 0 chr10 16604739 16604867 -128984421 + FLAM_C SINE Alu 1 129 -4 2239 171 68 46 chr10 16604984 16605480 -128983808 - MER67D LTR ERV1 -4 510 4 363 71 0 5 chr10 16607609 16607665 -128981623 - MLT2B3 LTR ERVL 0 554 411 2648 176 6 45 chr10 16607716 16608245 -128981043 - MLT2B3 LTR ERVL -46 508 1 385 256 17 17 chr10 16608252 16608369 -128980919 + MIR3 SINE MIR 83 199 -9 22 0 0 0 chr10 16609154 16609176 -128980112 + GC_rich Low_complexity Low_complexity 1 22 0 1814 136 55 0 chr10 16612267 16612575 -128976713 + MER1A DNA MER1_type 204 528 -1 489 299 20 7 chr10 16612594 16612741 -128976547 - MLT2E LTR ERVL -477 151 3 3222 128 28 26 chr10 16613749 16614325 -128974963 - MER41B LTR ERV1 -15 620 44 3225 84 16 7 chr10 16615789 16616229 -128973059 + MLT2A1 LTR ERVL 1 444 0 1193 223 50 60 chr10 16616429 16616676 -128972612 - MLT1B LTR MaLR -2 388 145 1899 157 0 7 chr10 16616676 16616957 -128972331 + AluSx SINE Alu 2 280 -32 1193 223 50 60 chr10 16616957 16617091 -128972197 - MLT1B LTR MaLR -245 145 11 2051 130 7 10 chr10 16618570 16618877 -128970411 + AluSg SINE Alu 1 306 -4 17272 33 2 1 chr10 16618951 16621807 -128967481 - L1PA3 LINE L1 -3 6152 3296 6989 25 1 0 chr10 16621807 16622693 -128966595 + L1PA3 LINE L1 2399 3285 -2861 265 294 20 26 chr10 16622820 16622973 -128966315 - MER104 DNA Tc2 -27 153 2 633 236 124 32 chr10 16623006 16623359 -128965929 + LTR50 LTR ERVL 140 605 -190 2450 112 3 0 chr10 16623378 16623734 -128965554 - THE1B LTR MaLR -7 357 1 249 212 94 0 chr10 16623770 16623855 -128965433 + LTR50 LTR ERVL 695 787 -8 581 248 48 61 chr10 16624407 16624730 -128964558 + L1ME3A LINE L1 1069 1401 -5039 21 0 0 0 chr10 16624730 16624751 -128964537 + AT_rich Low_complexity Low_complexity 1 21 0 215 254 79 0 chr10 16624789 16624852 -128964436 - MER5A DNA MER1_type -22 167 100 187 255 106 0 chr10 16624983 16625030 -128964258 + L2 LINE L2 3158 3209 -63 800 296 47 51 chr10 16625037 16625375 -128963913 + L1ME3A LINE L1 4755 5092 -1314 2544 39 10 10 chr10 16625375 16625686 -128963602 + AluY SINE Alu 1 311 0 800 296 47 51 chr10 16625686 16625841 -128963447 + L1ME3A LINE L1 5092 5246 -1160 21 0 0 0 chr10 16626032 16626053 -128963235 + AT_rich Low_complexity Low_complexity 1 21 0 207 0 0 0 chr10 16626053 16626076 -128963212 + (CA)n Simple_repeat Simple_repeat 2 24 0 1808 286 93 3 chr10 16626127 16626721 -128962567 + L1ME3A LINE L1 5555 6238 -192 2299 122 0 0 chr10 16626721 16627032 -128962256 + AluSq SINE Alu 1 311 -2 1808 286 93 3 chr10 16627032 16627220 -128962068 + L1ME3A LINE L1 6238 6408 -22 256 185 31 0 chr10 16627489 16627554 -128961734 + HAL1 LINE L1 2310 2376 -131 617 240 96 24 chr10 16627606 16627814 -128961474 - MER58A DNA MER1_type -1 223 1 35 71 0 0 chr10 16627828 16627898 -128961390 + AT_rich Low_complexity Low_complexity 1 70 0 1372 155 30 15 chr10 16627988 16628253 -128961035 + L1MB1 LINE L1 5406 5674 -494 3983 99 24 10 chr10 16628283 16628867 -128960421 - L1PA10 LINE L1 -10 6158 5567 2553 161 58 8 chr10 16628867 16629352 -128959936 + L1MB1 LINE L1 5660 6168 0 381 227 80 0 chr10 16629391 16629567 -128959721 - Charlie2 DNA MER1_type -249 2613 2424 13701 101 1 15 chr10 16629667 16631765 -128957523 + L1PA6 LINE L1 615 2682 -3464 20182 62 9 2 chr10 16631945 16635381 -128953907 + L1PA6 LINE L1 2706 6148 -6 326 80 40 0 chr10 16635395 16635445 -128953843 + MLT2A1 LTR ERVL 393 444 0 25534 105 11 6 chr10 16635445 16639136 -128950152 + HERVL-A1 LTR ERVL 1 3710 -1944 2314 101 0 3 chr10 16639138 16639444 -128949844 - AluSx SINE Alu -7 305 1 1042 119 0 0 chr10 16639450 16639584 -128949704 - AluSg SINE Alu -174 136 3 1452 108 5 0 chr10 16639585 16639799 -128949489 + HERVL-A1 LTR ERVL 3709 3923 -1731 2239 134 3 21 chr10 16639902 16640283 -128949005 - MER4D LTR ERV1 -528 375 2 2251 176 18 18 chr10 16640373 16640821 -128948467 + MLT2B2 LTR ERVL 5 452 -63 997 166 270 10 chr10 16640831 16641120 -128948168 - MER47A DNA MER2_type -2 364 1 198 167 0 0 chr10 16641122 16641158 -128948130 + (TG)n Simple_repeat Simple_repeat 1 36 0 279 159 111 0 chr10 16641161 16641224 -128948064 + MLT2B2 LTR ERVL 451 520 0 1405 249 57 10 chr10 16641225 16641614 -128947674 + ERVL LTR ERVL 2 408 -5356 1357 181 0 0 chr10 16641614 16641830 -128947458 + AluSg/x SINE Alu 85 300 -10 4943 190 24 30 chr10 16641852 16642435 -128946853 + ERVL LTR ERVL 401 980 -4784 2009 141 7 3 chr10 16642435 16642739 -128946549 - AluSg SINE Alu -5 305 1 4943 190 24 30 chr10 16642739 16643224 -128946064 + ERVL LTR ERVL 980 1467 -4297 327 236 14 0 chr10 16643445 16643517 -128945771 - LTR43 LTR ERV1 -307 295 223 4278 210 29 10 chr10 16643758 16643972 -128945316 + ERVL LTR ERVL 1460 1669 -4095 3087 107 34 0 chr10 16643972 16644017 -128945271 - MLT2A2 LTR ERVL 0 453 411 330 26 0 0 chr10 16644017 16644056 -128945232 + (TG)n Simple_repeat Simple_repeat 2 40 0 243 0 0 0 chr10 16644055 16644082 -128945206 + (TA)n Simple_repeat Simple_repeat 2 28 0 * 3087 107 34 0 chr10 16644056 16644474 -128944814 - MLT2A2 LTR ERVL -42 411 1 4278 210 29 10 chr10 16644474 16645122 -128944166 + ERVL LTR ERVL 1669 2338 -3426 1838 153 60 0 chr10 16645116 16645417 -128943871 - ERVL LTR ERVL -2062 3702 3384 * 1557 151 28 8 chr10 16645414 16645665 -128943623 + ERVL LTR ERVL 4652 4907 -857 * 2579 144 0 3 chr10 16645675 16646064 -128943224 + ERVL LTR ERVL 2336 2723 -3041 2388 190 65 7 chr10 16646071 16646514 -128942774 - MER21B LTR ERV1 -371 492 24 4020 169 32 9 chr10 16646514 16647416 -128941872 + ERVL LTR ERVL 1999 3412 -2352 5633 172 50 13 chr10 16647418 16648449 -128940839 + ERVL LTR ERVL 3372 4441 -1323 5394 173 17 51 chr10 16648549 16649629 -128939659 + ERVL LTR ERVL 4433 5475 -289 268 346 8 8 chr10 16649633 16649760 -128939528 - L2 LINE L2 -1408 1906 1780 3585 186 24 52 chr10 16651547 16651804 -128937484 + L1MC3 LINE L1 6471 6734 -1051 848 60 0 9 chr10 16651804 16651920 -128937368 + (TTTC)n Simple_repeat Simple_repeat 2 116 0 1502 158 18 35 chr10 16651923 16652208 -128937080 - AluJo SINE Alu -32 280 1 3585 186 24 52 chr10 16652208 16652756 -128936532 + L1MC3 LINE L1 6736 7257 -528 310 295 124 3 chr10 16653634 16653932 -128935356 + L1M4 LINE L1 3605 3938 -2208 829 283 40 17 chr10 16654189 16654489 -128934799 + L1MC4a LINE L1 6559 6865 -943 303 319 60 60 chr10 16654491 16654723 -128934565 + L1M4 LINE L1 11 242 -6300 603 331 121 35 chr10 16654888 16655655 -128933633 - L1 LINE L1 -1336 4810 3978 325 362 26 0 chr10 16655660 16655776 -128933512 + MIR SINE MIR 2 120 -142 304 208 10 21 chr10 16655826 16655922 -128933366 + (TA)n Simple_repeat Simple_repeat 1 95 0 553 203 77 8 chr10 16655924 16656170 -128933118 - L1 LINE L1 -2828 3318 3056 * 1192 259 134 18 chr10 16656162 16656708 -128932580 - L1M4 LINE L1 -2275 3871 3195 186 43 0 0 chr10 16656708 16656731 -128932557 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1192 259 134 18 chr10 16656731 16656920 -128932368 - L1M4 LINE L1 -2951 3195 3029 21 0 0 0 chr10 16657483 16657504 -128931784 + AT_rich Low_complexity Low_complexity 1 21 0 299 270 58 108 chr10 16659603 16659844 -128929444 - L2 LINE L2 -49 3223 2995 2538 55 0 10 chr10 16659872 16660184 -128929104 + AluY SINE Alu 1 309 -2 6319 89 12 0 chr10 16661036 16662117 -128927171 + L1PA8 LINE L1 5066 6158 -14 23 0 0 0 chr10 16662391 16662414 -128926874 + AT_rich Low_complexity Low_complexity 1 23 0 2112 119 7 10 chr10 16663662 16663964 -128925324 - AluSx SINE Alu -11 301 1 929 288 9 0 chr10 16664139 16664365 -128924923 - MIR SINE MIR -31 231 4 29 32 0 48 chr10 16664497 16664526 -128924762 + AT_rich Low_complexity Low_complexity 1 30 -29 1580 185 18 4 chr10 16664526 16664807 -128924481 + AluJo SINE Alu 1 285 -27 29 32 0 48 chr10 16664807 16664839 -128924449 + AT_rich Low_complexity Low_complexity 30 59 0 230 146 85 12 chr10 16666286 16666368 -128922920 + (TA)n Simple_repeat Simple_repeat 1 88 0 2244 111 0 0 chr10 16667688 16667986 -128921302 - AluSx SINE Alu -14 298 1 3080 221 54 40 chr10 16668334 16670077 -128919211 + L1ME1 LINE L1 4206 5963 -203 510 336 66 8 chr10 16671899 16672140 -128917148 - MIR SINE MIR -1 261 7 313 308 136 0 chr10 16672290 16672459 -128916829 - L2 LINE L2 -936 2378 2187 196 91 45 0 chr10 16674212 16674256 -128915032 + (TA)n Simple_repeat Simple_repeat 1 46 0 2366 90 0 0 chr10 16674335 16674636 -128914652 - AluSg SINE Alu -9 301 1 261 152 101 25 chr10 16675656 16675735 -128913553 + L1MEd LINE L1 70 154 -5965 2202 114 0 10 chr10 16675897 16676203 -128913085 - AluSg SINE Alu -7 303 1 259 349 28 9 chr10 16676520 16676629 -128912659 + L1MEd LINE L1 531 641 -5478 1097 134 27 5 chr10 16677098 16677285 -128912003 - L1PB3 LINE L1 -7 6147 5957 594 281 72 26 chr10 16677414 16677805 -128911483 + L1MEd LINE L1 700 1108 -5011 357 319 30 6 chr10 16678127 16678293 -128910995 + L1 LINE L1 3496 3665 -2481 474 244 48 39 chr10 16678419 16678696 -128910592 - LTR52 LTR ERVL -5 416 110 504 282 13 51 chr10 16678997 16679153 -128910135 - LTR33 LTR ERVL -306 215 66 398 249 216 0 chr10 16679183 16679364 -128909924 - L1MEd LINE L1 -4225 2315 2096 10839 92 6 13 chr10 16679720 16681203 -128908085 + HERVL-A1 LTR ERVL 4182 5654 0 3360 86 5 0 chr10 16681203 16681645 -128907643 + MLT2A1 LTR ERVL 1 444 0 425 206 11 11 chr10 16681650 16681742 -128907546 + L1M4c LINE L1 855 946 -5700 195 184 0 0 chr10 16681798 16681836 -128907452 + T-rich Low_complexity Low_complexity 1 38 0 2053 212 27 53 chr10 16681852 16682583 -128906705 + L1M4c LINE L1 836 1539 -5003 * 2377 287 72 85 chr10 16682576 16683769 -128905519 + L1 LINE L1 3700 4877 -1269 453 243 9 28 chr10 16686235 16686342 -128902946 - MER110 LTR ERV1 0 491 387 210 192 0 0 chr10 16686386 16686438 -128902850 + (TGGA)n Simple_repeat Simple_repeat 1 52 0 485 279 34 44 chr10 16686488 16686692 -128902596 - MER110 LTR ERV1 -102 389 188 3582 128 40 3 chr10 16688451 16689058 -128900230 + L1PB2 LINE L1 5523 6151 0 581 181 150 8 chr10 16689058 16689185 -128900103 - MLT1A1 LTR MaLR -220 145 1 4631 225 42 24 chr10 16689194 16690699 -128898589 + L1 LINE L1 3036 4611 -1535 467 273 12 55 chr10 16693955 16694120 -128895168 + L2 LINE L2 3156 3313 0 1649 176 44 7 chr10 16696084 16696379 -128892909 + AluSx SINE Alu 6 311 -1 189 107 0 0 chr10 16698094 16698122 -128891166 + (CA)n Simple_repeat Simple_repeat 2 29 0 1695 171 0 17 chr10 16698436 16698734 -128890554 - AluJb SINE Alu -19 293 1 24 32 0 0 chr10 16698872 16698903 -128890385 + AT_rich Low_complexity Low_complexity 1 31 0 270 281 51 34 chr10 16698915 16699207 -128890081 - L1MEd LINE L1 -4911 1619 1323 584 103 35 9 chr10 16699215 16699331 -128889957 + CT-rich Low_complexity Low_complexity 2 120 0 525 318 59 3 chr10 16699371 16699660 -128889628 - L1MEd LINE L1 -5297 1233 929 3974 208 23 9 chr10 16699815 16700875 -128888413 - L1MB7 LINE L1 -16 6168 5084 574 221 13 6 chr10 16700909 16701067 -128888221 - L1MEd LINE L1 -5957 573 415 2329 104 0 0 chr10 16701122 16701419 -128887869 - AluSg SINE Alu -13 297 1 453 333 83 15 chr10 16701435 16701641 -128887647 + MIR SINE MIR 34 251 -11 251 323 11 11 chr10 16701809 16701902 -128887386 - MIR SINE MIR -122 140 48 188 83 0 28 chr10 16702083 16702119 -128887169 + (TTAAA)n Simple_repeat Simple_repeat 1 35 0 547 209 0 31 chr10 16702119 16702248 -128887040 - MER3 DNA MER1_type -78 131 7 924 71 8 0 chr10 16703155 16703282 -128886006 - THE1C LTR MaLR 0 375 248 919 81 0 0 chr10 16703333 16703456 -128885832 - THE1C LTR MaLR 0 375 253 3648 120 31 21 chr10 16703689 16704039 -128885249 - L1PA16 LINE L1 -16 6150 5790 2338 139 25 3 chr10 16704039 16704406 -128884882 - THE1C LTR MaLR 0 375 1 3648 120 31 21 chr10 16704406 16704670 -128884618 - L1PA16 LINE L1 -376 5790 5530 1548 129 4 0 chr10 16704676 16704917 -128884371 + LOR1a LTR ERV1 256 497 0 428 214 10 0 chr10 16704919 16705017 -128884271 + L1MC2 LINE L1 6246 6344 0 244 395 18 17 chr10 16706074 16706298 -128882990 + MIR SINE MIR 7 226 -36 1277 199 60 9 chr10 16706375 16706692 -128882596 + L1MC2 LINE L1 5987 6319 -25 470 299 9 23 chr10 16707086 16707307 -128881981 + Charlie2a DNA MER1_type 571 788 -2074 943 122 27 4 chr10 16707309 16707497 -128881791 + AluSx SINE Alu 35 301 -11 474 293 46 26 chr10 16707513 16707858 -128881430 + Charlie2a DNA MER1_type 790 1141 -1721 7373 168 7 21 chr10 16707866 16709372 -128879916 + L1P LINE L1 3680 5164 -982 722 128 0 0 chr10 16709372 16709474 -128879814 + AluSq/x SINE Alu 26 127 -185 27 62 0 0 chr10 16709580 16709628 -128879660 + AT_rich Low_complexity Low_complexity 1 48 0 207 195 0 0 chr10 16709673 16709714 -128879574 + (AATTG)n Simple_repeat Simple_repeat 4 44 0 542 176 88 14 chr10 16709716 16709864 -128879424 + Charlie2a DNA MER1_type 1488 1646 -1216 227 149 0 21 chr10 16709889 16709936 -128879352 + (GGAGA)n Simple_repeat Simple_repeat 4 49 0 2222 112 13 0 chr10 16709957 16710261 -128879027 + AluSp SINE Alu 1 308 -5 2250 108 0 3 chr10 16710314 16710609 -128878679 + AluSg1 SINE Alu 1 294 -15 1819 211 110 24 chr10 16710613 16711334 -128877954 + Charlie2a DNA MER1_type 1652 2434 -428 3504 73 0 0 chr10 16711447 16711914 -128877374 - Harlequin LTR ERV1 -5730 2896 2430 * 3672 68 0 0 chr10 16711899 16712371 -128876917 - Harlequin LTR ERV1 -6612 2014 1543 3416 99 23 5 chr10 16712390 16712743 -128876545 - Harlequin LTR ERV1 -5087 1809 1464 315 0 0 0 chr10 16712743 16712778 -128876510 + (TG)n Simple_repeat Simple_repeat 2 36 0 3416 99 23 5 chr10 16712778 16713175 -128876113 - Harlequin LTR ERV1 -5432 1464 1001 1758 98 167 164 chr10 16713183 16713921 -128875367 + LTR12 LTR ERV1 57 560 -154 1947 169 156 30 chr10 16714782 16715307 -128873981 - LTR49 LTR ERV1 -4 591 1 793 160 12 59 chr10 16715674 16715808 -128873480 - MER4E LTR ERV1 -7 772 646 3138 124 28 57 chr10 16715808 16716371 -128872917 + LTR10B LTR ERV1 1 547 0 793 160 12 59 chr10 16716371 16716405 -128872883 - MER4E LTR ERV1 -133 646 612 666 165 0 0 chr10 16716405 16716508 -128872780 - AluSq/x SINE Alu -210 103 1 338 165 8 75 chr10 16717036 16717163 -128872125 - MER41A LTR ERV1 -9 516 393 1644 112 0 9 chr10 16717164 16717294 -128871994 + AluSq SINE Alu 1 130 -183 227 31 31 0 chr10 16717294 16717326 -128871962 + (TA)n Simple_repeat Simple_repeat 2 34 0 1644 112 0 9 chr10 16717326 16717419 -128871869 + AluSq SINE Alu 130 222 -91 3960 52 12 0 chr10 16717419 16717903 -128871385 + LTR2B LTR ERV1 1 490 0 520 139 0 0 chr10 16717903 16717975 -128871313 + AluSq SINE Alu 219 290 -23 22 0 0 0 chr10 16717975 16717997 -128871291 + AT_rich Low_complexity Low_complexity 1 22 0 622 200 73 33 chr10 16717997 16718172 -128871116 + FAM SINE Alu 1 45 0 1962 192 2 35 chr10 16718179 16718607 -128870681 - MER41B LTR ERV1 -108 527 114 21 0 0 0 chr10 16718625 16718646 -128870642 + AT_rich Low_complexity Low_complexity 1 21 0 268 270 16 0 chr10 16719037 16719100 -128870188 + L2 LINE L2 3186 3249 -23 2372 102 10 0 chr10 16719230 16719535 -128869753 + AluSc SINE Alu 1 308 -1 226 83 0 62 chr10 16720519 16720567 -128868721 + (CATATA)n Simple_repeat Simple_repeat 3 47 0 28 61 0 0 chr10 16720669 16720718 -128868570 + AT_rich Low_complexity Low_complexity 1 49 0 13848 152 34 17 chr10 16720837 16724326 -128864962 - L1MA2 LINE L1 -4 7719 4123 1594 221 14 0 chr10 16724326 16724615 -128864673 + AluJb SINE Alu 1 293 -19 13848 152 34 17 chr10 16724615 16725752 -128863536 - L1MA2 LINE L1 -3600 4123 3007 5007 127 34 42 chr10 16725779 16726850 -128862438 - L1PB1 LINE L1 -2 6149 5090 * 13107 158 138 4 chr10 16726837 16726850 -128862438 - L1MA2 LINE L1 -4532 3033 3023 835 85 0 0 chr10 16726850 16726956 -128862332 - U6 snRNA snRNA 0 107 2 13107 158 138 4 chr10 16726956 16729598 -128859690 - L1MA2 LINE L1 -4542 3023 23 2039 154 3 0 chr10 16729787 16730098 -128859190 + AluSx SINE Alu 1 312 0 370 204 61 0 chr10 16730398 16730496 -128858792 - MER97c DNA MER1_type? -913 177 74 1582 204 0 7 chr10 16730891 16731175 -128858113 + AluJb SINE Alu 1 282 -30 263 313 125 32 chr10 16731667 16731948 -128857340 + MLT1J LTR MaLR 124 430 -81 569 211 58 53 chr10 16732190 16732398 -128856890 - MER3 DNA MER1_type 0 209 1 323 311 72 5 chr10 16732418 16732611 -128856677 - L1ME LINE L1 -516 5637 5432 496 308 46 23 chr10 16732714 16733153 -128856135 - L1ME LINE L1 -1095 5034 4586 983 201 75 61 chr10 16733199 16733622 -128855666 + MLT1D LTR MaLR 44 505 0 3922 240 20 54 chr10 16733623 16734856 -128854432 + MLT1D-int LTR MaLR 2 1192 -179 226 229 0 0 chr10 16734854 16734902 -128854386 - MLT1-int LTR MaLR -668 703 656 * 269 152 0 0 chr10 16734909 16734955 -128854333 + MLT1D-int LTR MaLR 1187 1232 -139 2183 121 7 0 chr10 16734956 16735253 -128854035 - AluSx SINE Alu -9 303 5 11781 45 7 0 chr10 16735310 16737545 -128851743 - L1PA5 LINE L1 -13 6141 3899 9740 44 1 2 chr10 16737546 16738836 -128850452 + L1PA5 LINE L1 2594 3881 -2265 435 219 41 0 chr10 16738855 16738978 -128850310 + MLT1D-int LTR MaLR 1237 1364 -7 1040 246 111 35 chr10 16738985 16739437 -128849851 + MLT1D LTR MaLR 1 486 -19 647 319 129 18 chr10 16739457 16740021 -128849267 - L1ME LINE L1 -1549 4580 3954 337 258 47 30 chr10 16740121 16740377 -128848911 - L1MEc LINE L1 -4865 1290 993 315 281 9 83 chr10 16740473 16740632 -128848656 - L1M4 LINE L1 -2913 3233 3094 2239 102 10 19 chr10 16740632 16740946 -128848342 - AluY SINE Alu 0 311 1 315 281 9 83 chr10 16740946 16741014 -128848274 - L1M4 LINE L1 -3052 3094 3023 23 33 0 0 chr10 16741116 16741146 -128848142 + AT_rich Low_complexity Low_complexity 1 30 0 2579 126 30 0 chr10 16741190 16741595 -128847693 - L1PA10 LINE L1 -18 6150 5734 4284 78 23 11 chr10 16741595 16742610 -128846678 - MER11A LTR ERVK -1 1265 1 2454 107 77 5 chr10 16742610 16743314 -128845974 - L1PA10 LINE L1 -391 5740 4879 1609 223 0 3 chr10 16743930 16744231 -128845057 - AluJo SINE Alu -12 300 1 252 330 96 59 chr10 16744370 16744933 -128844355 - L1MEc LINE L1 -5487 632 49 2268 113 0 0 chr10 16744976 16745277 -128844011 - AluSx SINE Alu -11 301 1 226 270 68 27 chr10 16745302 16745450 -128843838 - L1MC/D LINE L1 -1894 5914 5761 3754 148 19 28 chr10 16745734 16745830 -128843458 - L1MA7 LINE L1 -9 6282 6187 2114 117 0 37 chr10 16745830 16746154 -128843134 + AluSq SINE Alu 1 312 -1 3754 148 19 28 chr10 16746154 16746422 -128842866 - L1MA7 LINE L1 -104 6187 5918 2157 177 78 0 chr10 16746422 16746817 -128842471 + MSTB LTR MaLR 1 426 0 3754 148 19 28 chr10 16746817 16747172 -128842116 - L1MA7 LINE L1 -373 5918 5568 403 285 119 55 chr10 16747189 16747327 -128841961 - L1MC/D LINE L1 -369 5752 5624 1760 97 0 0 chr10 16747327 16747554 -128841734 + AluSg/x SINE Alu 84 310 -2 403 285 119 55 chr10 16747554 16747836 -128841452 - L1MC/D LINE L1 -497 5624 5305 2100 120 10 3 chr10 16748501 16748801 -128840487 - AluSc SINE Alu -7 302 1 355 301 81 40 chr10 16749126 16749299 -128839989 - MER5A DNA MER1_type -3 186 7 529 253 26 52 chr10 16749329 16749523 -128839765 + MER5A DNA MER1_type 1 189 0 306 375 44 7 chr10 16749530 16749666 -128839622 + MIR3 SINE MIR 37 177 -31 2468 80 0 0 chr10 16749823 16750122 -128839166 - AluSg SINE Alu -11 299 1 403 323 117 9 chr10 16752910 16753133 -128836155 + MIR SINE MIR 2 248 -14 367 191 227 9 chr10 16753715 16753825 -128835463 - L2 LINE L2 -2 3311 3178 383 308 42 28 chr10 16754032 16754246 -128835042 + HERV16 LTR ERVL 3472 3688 -1308 633 351 40 23 chr10 16754460 16754666 -128834622 + HERV16 LTR ERVL 4482 4683 -971 1823 146 40 45 chr10 16754666 16755043 -128834245 - THE1C LTR MaLR 0 375 1 633 351 40 23 chr10 16755043 16755358 -128833930 + HERV16 LTR ERVL 4683 5012 -642 308 256 84 23 chr10 16755392 16755569 -128833719 + L1M4 LINE L1 2331 2564 -3902 2852 233 58 57 chr10 16756146 16757630 -128831658 + L1M4 LINE L1 4066 5550 -832 2541 269 54 20 chr10 16757649 16758558 -128830730 + L1MEc LINE L1 37 976 -5420 374 289 103 0 chr10 16758562 16758718 -128830570 + L1M4c LINE L1 3518 3689 -2693 246 244 118 14 chr10 16758739 16758861 -128830427 + MIR SINE MIR 24 226 -36 1608 133 29 65 chr10 16758863 16758975 -128830313 + AluJb SINE Alu 1 115 -197 2050 125 47 33 chr10 16758975 16759334 -128829954 + THE1B LTR MaLR 1 364 0 1608 133 29 65 chr10 16759334 16759554 -128829734 + AluJb SINE Alu 115 312 0 21 71 0 0 chr10 16759808 16759850 -128829438 + AT_rich Low_complexity Low_complexity 1 42 0 733 287 75 35 chr10 16760050 16760566 -128828722 + HAL1b LINE L1 282 743 -605 23 0 0 0 chr10 16760615 16760638 -128828650 + AT_rich Low_complexity Low_complexity 1 23 0 299 146 0 0 chr10 16760839 16760887 -128828401 - MLT2B1 LTR ERVL 0 397 350 2222 95 0 17 chr10 16760918 16761214 -128828074 + AluY SINE Alu 1 291 -20 191 36 36 0 chr10 16761214 16761242 -128828046 + (TA)n Simple_repeat Simple_repeat 2 30 0 848 272 110 35 chr10 16761261 16761714 -128827574 - MLT2B1 LTR ERVL -20 462 1 1596 285 41 10 chr10 16761714 16762230 -128827058 + L1ME2 LINE L1 28 559 -5486 2057 132 44 22 chr10 16762282 16762627 -128826661 + MLT1B LTR MaLR 18 373 -17 1320 224 128 14 chr10 16762627 16762980 -128826308 - MSTD LTR MaLR 0 396 4 2057 132 44 22 chr10 16762980 16762998 -128826290 + MLT1B LTR MaLR 373 389 -1 228 111 0 0 chr10 16763005 16763041 -128826247 + (CAA)n Simple_repeat Simple_repeat 1 36 0 2026 239 138 26 chr10 16763046 16763455 -128825833 + L1ME2 LINE L1 577 939 -5625 2024 119 20 3 chr10 16763455 16763749 -128825539 + AluSx SINE Alu 11 309 -3 2026 239 138 26 chr10 16763749 16765199 -128824089 + L1ME2 LINE L1 939 2225 -4339 1797 130 105 0 chr10 16765199 16765475 -128823813 - AluSq SINE Alu -8 305 1 2026 239 138 26 chr10 16765475 16766440 -128822848 + L1ME2 LINE L1 2225 3860 -2704 * 5103 172 33 18 chr10 16766437 16768469 -128820819 + L1PA16 LINE L1 4103 6161 -5 4024 223 36 50 chr10 16768545 16768721 -128820567 + L1ME2 LINE L1 3938 4115 -2449 1822 134 43 33 chr10 16768721 16769020 -128820268 + AluJo SINE Alu 1 302 -10 4865 171 20 39 chr10 16769020 16770006 -128819282 + LTR5 LTR ERVK 2 969 0 4024 223 36 50 chr10 16770006 16770504 -128818784 + L1ME2 LINE L1 4114 4617 -1947 612 254 0 0 chr10 16770504 16770634 -128818654 + FLAM_A SINE Alu 1 130 -3 4024 223 36 50 chr10 16770634 16771355 -128817933 + L1ME2 LINE L1 4617 5316 -1248 1129 240 62 22 chr10 16771351 16771709 -128817579 + L1ME2 LINE L1 6119 6490 -92 * 1180 226 0 0 chr10 16771709 16771975 -128817313 + L1PA15 LINE L1 4124 4389 -1757 294 196 0 0 chr10 16771974 16772030 -128817258 + L1PA16 LINE L1 6031 6086 -80 * 4985 139 15 24 chr10 16772038 16772976 -128816312 + L1PA15 LINE L1 4397 5323 -842 2389 57 0 0 chr10 16772976 16773280 -128816008 + AluY SINE Alu 1 304 0 4985 139 15 24 chr10 16773280 16774115 -128815173 + L1PA15 LINE L1 5323 6164 -1 491 167 0 0 chr10 16774120 16774204 -128815084 + L1ME2 LINE L1 6486 6569 -13 317 304 140 27 chr10 16774376 16774606 -128814682 - MIR SINE MIR -3 259 7 2199 112 0 10 chr10 16774956 16775269 -128814019 + AluSg SINE Alu 1 310 0 1438 218 0 24 chr10 16776494 16776788 -128812500 + AluJo SINE Alu 3 289 -23 312 106 0 0 chr10 16776797 16776844 -128812444 - Charlie5 DNA MER1_type -2521 91 45 206 288 0 0 chr10 16777143 16777202 -128812086 + CT-rich Low_complexity Low_complexity 2 60 0 195 69 0 0 chr10 16778419 16778448 -128810840 + (TTTG)n Simple_repeat Simple_repeat 1 29 0 646 115 10 0 chr10 16778448 16778544 -128810744 - AluJ SINE Alu -33 279 183 762 162 0 0 chr10 16778560 16778677 -128810611 - AluJ SINE Alu -191 121 5 345 323 64 86 chr10 16778806 16779317 -128809971 + L2 LINE L2 2727 3221 -51 378 189 28 0 chr10 16779375 16779481 -128809807 + GA-rich Low_complexity Low_complexity 4 112 0 203 233 0 23 chr10 16779582 16779625 -128809663 + polypurine Low_complexity Low_complexity 4 45 0 820 169 3 20 chr10 16779625 16779972 -128809316 + GA-rich Low_complexity Low_complexity 1 340 0 29 0 0 0 chr10 16780966 16780995 -128808293 + AT_rich Low_complexity Low_complexity 1 29 0 216 0 0 0 chr10 16781618 16781642 -128807646 + (TA)n Simple_repeat Simple_repeat 2 25 0 658 287 39 4 chr10 16782269 16782527 -128806761 - MER102a DNA MER1_type -10 320 54 186 300 140 20 chr10 16782598 16782698 -128806590 - MIR3 SINE MIR -46 162 51 517 296 75 40 chr10 16782722 16782921 -128806367 + MIR SINE MIR 44 249 -13 3540 132 3 19 chr10 16783050 16783305 -128805983 + L1PA13 LINE L1 5578 5835 -328 2265 110 0 0 chr10 16783305 16783597 -128805691 + AluSg SINE Alu 1 292 -18 3540 132 3 19 chr10 16783597 16783932 -128805356 + L1PA13 LINE L1 5835 6159 -4 21 0 0 0 chr10 16783972 16783993 -128805295 + AT_rich Low_complexity Low_complexity 1 21 0 195 42 0 0 chr10 16784385 16784409 -128804879 + (A)n Simple_repeat Simple_repeat 1 24 0 446 194 130 28 chr10 16785951 16786059 -128803229 + FLAM_C SINE Alu 5 123 -20 420 148 139 30 chr10 16786069 16786170 -128803118 + FLAM_C SINE Alu 16 127 -16 1701 247 67 15 chr10 16786377 16786638 -128802650 - MLT1D LTR MaLR 0 505 259 1939 157 7 7 chr10 16786638 16786944 -128802344 - AluSx SINE Alu -6 306 1 1701 247 67 15 chr10 16786944 16787160 -128802128 - MLT1D LTR MaLR -246 259 3 3121 117 32 2 chr10 16787566 16788061 -128801227 - L1PA16 LINE L1 -11 6155 5646 1280 210 118 13 chr10 16788062 16788570 -128800718 - L1M4 LINE L1 -734 5440 4892 1840 160 0 3 chr10 16788572 16788854 -128800434 + AluSx SINE Alu 2 282 -30 354 324 88 12 chr10 16789312 16789482 -128799806 - MIR SINE MIR -72 190 8 207 226 130 61 chr10 16792036 16792151 -128797137 - L2 LINE L2 -1 3312 3190 746 261 32 110 chr10 16792366 16792619 -128796669 - L2 LINE L2 -9 3304 3088 2039 129 0 11 chr10 16792619 16792906 -128796382 + AluSx SINE Alu 1 284 -28 746 261 32 110 chr10 16792906 16793024 -128796264 - L2 LINE L2 -225 3088 2962 21 0 0 0 chr10 16793092 16793113 -128796175 + AT_rich Low_complexity Low_complexity 1 21 0 31 26 0 0 chr10 16793168 16793206 -128796082 + AT_rich Low_complexity Low_complexity 1 38 0 320 366 113 17 chr10 16794054 16794337 -128794951 - L2 LINE L2 -261 3011 2690 1566 227 47 20 chr10 16794733 16795183 -128794105 - LTR40b LTR ERVL 0 462 1 252 309 53 0 chr10 16795187 16795281 -128794007 + MIR SINE MIR 77 175 -87 283 313 30 20 chr10 16795484 16795685 -128793603 + LTR37B LTR ERV1 248 450 -18 211 321 107 0 chr10 16795676 16795760 -128793528 + MIR SINE MIR 167 259 -3 * 1900 154 90 29 chr10 16796199 16796542 -128792746 - THE1B LTR MaLR 0 364 1 573 278 73 19 chr10 16798070 16798275 -128791013 + MIR SINE MIR 17 232 -30 1887 171 0 3 chr10 16798323 16798633 -128790655 + AluJo SINE Alu 1 309 -3 31 26 0 0 chr10 16798678 16798716 -128790572 + AT_rich Low_complexity Low_complexity 1 38 0 1580 170 10 20 chr10 16800706 16801000 -128788288 + AluJo SINE Alu 9 299 -13 245 286 41 129 chr10 16801383 16801441 -128787847 + L2 LINE L2 3137 3199 -73 2103 137 3 10 chr10 16801441 16801755 -128787533 + AluSx SINE Alu 1 312 0 245 286 41 129 chr10 16801755 16801843 -128787445 + L2 LINE L2 3199 3270 -2 2668 111 19 5 chr10 16801885 16802255 -128787033 + THE1C LTR MaLR 1 375 0 1630 162 25 14 chr10 16802405 16802689 -128786599 + AluJo SINE Alu 1 287 -25 183 296 96 48 chr10 16802737 16802862 -128786426 - MIR3 SINE MIR -65 143 13 1852 179 0 0 chr10 16804243 16804555 -128784733 - AluJb SINE Alu 0 312 1 4431 195 48 6 chr10 16805027 16805084 -128784204 + L1MB8 LINE L1 4959 5012 -1166 2375 129 33 33 chr10 16805084 16805448 -128783840 - THE1B LTR MaLR 0 364 1 4431 195 48 6 chr10 16805448 16806564 -128782724 + L1MB8 LINE L1 5012 6178 0 262 301 50 96 chr10 16806566 16806868 -128782420 - L2 LINE L2 -1317 1997 1710 651 200 0 0 chr10 16806904 16807009 -128782279 + FLAM_C SINE Alu 2 106 -37 186 368 47 47 chr10 16807047 16807218 -128782070 - L2 LINE L2 -2010 1304 1134 772 165 0 24 chr10 16807384 16807511 -128781777 - FLAM_C SINE Alu -6 137 14 260 346 108 42 chr10 16807549 16807910 -128781378 - L2 LINE L2 -2375 939 555 355 353 16 8 chr10 16808474 16808596 -128780692 + L2 LINE L2 3191 3313 0 310 266 53 18 chr10 16808933 16809046 -128780242 + MER103 DNA DNA 5 121 -45 2069 136 0 7 chr10 16809091 16809393 -128779895 - AluSx SINE Alu -12 300 1 630 267 0 0 chr10 16810532 16810663 -128778625 - FLAM_A SINE Alu 0 133 3 400 250 54 9 chr10 16810667 16810779 -128778509 + L2 LINE L2 3196 3312 -1 441 237 108 22 chr10 16810834 16810973 -128778315 - MIR SINE MIR -92 170 20 570 220 55 3 chr10 16810978 16811393 -128777895 - MER20B DNA MER1_type -8 775 285 787 150 0 17 chr10 16811423 16811543 -128777745 - FLAM_C SINE Alu -15 118 1 1698 166 32 21 chr10 16811723 16812155 -128777133 - L1MA4A LINE L1 -23 6280 5783 209 238 0 0 chr10 16812156 16812198 -128777090 + (TA)n Simple_repeat Simple_repeat 1 42 0 307 315 0 0 chr10 16812199 16812288 -128777000 - L1MC4 LINE L1 -1339 6703 6615 213 39 0 0 chr10 16812288 16812314 -128776974 + (CA)n Simple_repeat Simple_repeat 1 26 0 1426 134 84 8 chr10 16812314 16812575 -128776713 - L1M1 LINE L1 -514 5789 5509 323 155 0 17 chr10 16813408 16813466 -128775822 + MIR3 SINE MIR 149 205 -3 1864 161 3 20 chr10 16813751 16813886 -128775402 + AluJb SINE Alu 1 137 -175 2101 90 43 0 chr10 16813886 16814164 -128775124 + AluSc SINE Alu 1 290 -19 651 26 0 0 chr10 16814165 16814242 -128775046 + (TA)n Simple_repeat Simple_repeat 1 77 0 1864 161 3 20 chr10 16814242 16814403 -128774885 + AluJb SINE Alu 136 294 -18 738 170 0 0 chr10 16816044 16816150 -128773138 + FLAM_C SINE Alu 13 118 -25 823 193 23 12 chr10 16816160 16816546 -128772742 + GA-rich Low_complexity Low_complexity 1 390 0 2030 156 38 38 chr10 16817399 16817772 -128771516 - THE1C LTR MaLR 0 375 3 792 196 0 0 chr10 16817800 16817933 -128771355 + AluJo SINE Alu 3 135 -177 244 259 165 0 chr10 16818937 16819022 -128770266 - L1ME LINE L1 -530 5640 5542 7006 126 60 37 chr10 16819042 16820160 -128769128 - Tigger3b DNA MER2_type -1797 1231 82 2194 110 10 3 chr10 16820160 16820461 -128768827 - AluSq SINE Alu -10 303 1 7006 126 60 37 chr10 16820461 16820545 -128768743 - Tigger3b DNA MER2_type -2946 82 1 224 250 12 12 chr10 16820808 16820892 -128768396 + (TA)n Simple_repeat Simple_repeat 1 84 0 2449 78 10 0 chr10 16821351 16821658 -128767630 + AluY SINE Alu 1 310 -1 2073 139 10 0 chr10 16821691 16822000 -128767288 + AluSx SINE Alu 1 312 0 205 300 108 17 chr10 16822355 16822475 -128766813 - L2 LINE L2 -799 2515 2385 2002 108 66 10 chr10 16823248 16823536 -128765752 + AluSq SINE Alu 1 304 -9 1740 139 15 0 chr10 16824070 16824336 -128764952 + Tigger5 DNA MER2_type 2052 2321 -2 7132 78 23 0 chr10 16825396 16826489 -128762799 - L1PA7 LINE L1 -7 6147 5049 4773 87 0 0 chr10 16826489 16827133 -128762155 + L1PA7 LINE L1 4419 5062 -1084 1786 177 0 16 chr10 16827386 16827696 -128761592 + AluJb SINE Alu 1 305 -7 454 196 20 10 chr10 16828196 16828298 -128760990 - L1MC4 LINE L1 -18 8024 7922 2308 119 0 0 chr10 16828417 16828720 -128760568 + AluSx SINE Alu 1 303 -9 216 0 0 0 chr10 16829041 16829065 -128760223 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 314 307 88 76 chr10 16829065 16829475 -128759813 - L2 LINE L2 -13 3300 2886 1548 218 40 25 chr10 16829496 16830079 -128759209 + L1MEc LINE L1 2058 2606 -3609 579 158 219 0 chr10 16830097 16830211 -128759077 - FLAM_C SINE Alu -4 139 1 697 231 17 0 chr10 16830224 16830397 -128758891 + L1MEc LINE L1 2614 2789 -3426 2346 189 42 0 chr10 16830746 16831154 -128758134 - MSTB1 LTR MaLR 0 432 8 474 187 24 65 chr10 16831292 16831367 -128757921 + MER53 DNA DNA 1 71 -118 1778 107 9 0 chr10 16831367 16831600 -128757688 - AluSx SINE Alu -22 290 56 474 187 24 65 chr10 16831600 16831647 -128757641 + MER53 DNA DNA 71 118 -71 180 393 0 12 chr10 16831801 16831885 -128757403 - L3 LINE CR1 -44 1533 1451 539 364 22 29 chr10 16832569 16832885 -128756403 - L3b LINE CR1 -125 1458 1145 226 211 0 0 chr10 16833727 16833779 -128755509 + L1MC4 LINE L1 6652 6703 -1339 2371 68 0 10 chr10 16833792 16834084 -128755204 - AluY SINE Alu -22 289 1 1725 163 0 30 chr10 16834089 16834389 -128754899 - AluJo SINE Alu -21 291 1 2178 221 29 5 chr10 16834646 16835089 -128754199 + MER82 DNA MER2_type 200 653 0 233 221 147 0 chr10 16835089 16835157 -128754131 - MIR SINE MIR -111 151 74 2097 99 0 38 chr10 16835231 16835523 -128753765 + AluSg SINE Alu 14 294 -16 226 239 113 0 chr10 16835825 16835896 -128753392 + MIR SINE MIR 120 198 -64 1766 157 29 0 chr10 16836640 16836921 -128752367 + AluSx SINE Alu 3 291 -21 232 304 152 19 chr10 16836978 16837093 -128752195 + MIR SINE MIR 10 153 -109 1731 163 3 52 chr10 16837093 16837418 -128751870 + AluJo SINE Alu 1 309 -3 232 304 152 19 chr10 16837418 16837460 -128751828 + MIR SINE MIR 153 188 -74 289 207 69 0 chr10 16837581 16837639 -128751649 - L2 LINE L2 -2 3270 3209 189 0 0 0 chr10 16837663 16837684 -128751604 + (TG)n Simple_repeat Simple_repeat 2 22 0 784 189 0 0 chr10 16837932 16838054 -128751234 + FLAM_C SINE Alu 3 124 -19 208 253 58 69 chr10 16838638 16838725 -128750563 - L3b LINE CR1 -69 1514 1429 192 77 0 0 chr10 16839700 16839726 -128749562 + (TTA)n Simple_repeat Simple_repeat 2 27 0 876 129 0 0 chr10 16839732 16839848 -128749440 - FLAM_C SINE Alu -27 116 1 2169 122 16 0 chr10 16840087 16840435 -128748853 + AluSx SINE Alu 1 353 0 2032 178 53 61 chr10 16840642 16840822 -128748466 + MLT1D LTR MaLR 3 183 -322 2080 132 58 37 chr10 16840822 16841170 -128748118 + THE1A LTR MaLR 1 355 0 2032 178 53 61 chr10 16841170 16841395 -128747893 + MLT1D LTR MaLR 183 406 -99 1630 172 13 36 chr10 16841395 16841703 -128747585 - AluJo SINE Alu -11 301 1 2032 178 53 61 chr10 16841703 16841803 -128747485 + MLT1D LTR MaLR 406 505 0 1289 264 43 26 chr10 16842137 16842554 -128746734 - LTR33 LTR ERVL -84 437 14 491 111 0 14 chr10 16842827 16842899 -128746389 - THE1B LTR MaLR -2 362 292 2172 115 6 16 chr10 16842899 16843304 -128745984 + AluSg SINE Alu 1 402 0 2005 114 44 13 chr10 16843304 16843602 -128745686 - THE1B LTR MaLR -57 307 1 586 317 30 54 chr10 16844753 16844777 -128744511 + MLT1I LTR MaLR 5 28 -381 2013 129 10 7 chr10 16844777 16845071 -128744217 - AluSx SINE Alu -17 295 1 586 317 30 54 chr10 16845071 16845377 -128743911 + MLT1I LTR MaLR 28 327 -82 206 364 48 61 chr10 16845638 16845710 -128743578 + MIR SINE MIR 1 72 -190 1818 165 13 7 chr10 16845710 16846013 -128743275 + AluJo SINE Alu 1 305 -7 206 364 48 61 chr10 16846013 16846168 -128743120 + MIR SINE MIR 72 225 -37 464 157 11 45 chr10 16846351 16846440 -128742848 + MER58B DNA MER1_type 255 340 -1 318 353 39 13 chr10 16846712 16846865 -128742423 - L2 LINE L2 -4 3268 3112 285 396 28 39 chr10 16847498 16847645 -128741643 - L2 LINE L2 -362 2952 2805 2303 178 33 21 chr10 16847645 16848072 -128741216 - MSTB1 LTR MaLR 0 432 1 285 396 28 39 chr10 16848072 16848285 -128741003 - L2 LINE L2 -509 2805 2596 1420 196 6 92 chr10 16848291 16848617 -128740671 + AluJo SINE Alu 2 299 -3 247 224 10 20 chr10 16848637 16848735 -128740553 + GA-rich Low_complexity Low_complexity 1 97 0 287 259 142 14 chr10 16848835 16849056 -128740232 - MER5C DNA MER1_type -1 323 2 244 275 108 33 chr10 16849058 16849178 -128740110 - L2 LINE L2 -847 2467 2339 2177 202 77 0 chr10 16849736 16850137 -128739151 + MSTB1 LTR MaLR 1 432 0 1319 269 126 44 chr10 16850529 16851119 -128738169 - L2 LINE L2 -11 3302 2625 1623 188 0 14 chr10 16851119 16851412 -128737876 - AluJo SINE Alu -23 289 1 1319 269 126 44 chr10 16851412 16851702 -128737586 - L2 LINE L2 -688 2625 2360 207 278 37 0 chr10 16851731 16851785 -128737503 + L2 LINE L2 3228 3283 -30 1456 158 4 51 chr10 16851801 16852055 -128737233 + AluJo SINE Alu 43 284 -28 1696 178 3 17 chr10 16852632 16852924 -128736364 + AluJo SINE Alu 1 288 -24 1953 148 13 10 chr10 16854030 16854335 -128734953 + AluSx SINE Alu 1 306 -6 432 243 181 11 chr10 16854619 16854796 -128734492 - L2 LINE L2 -2 3311 3105 3348 187 43 88 chr10 16854817 16854961 -128734327 - L1 LINE L1 -2108 4038 3889 2180 66 52 7 chr10 16854961 16855248 -128734040 + AluY SINE Alu 1 300 -11 3348 187 43 88 chr10 16855248 16855810 -128733478 - L1 LINE L1 -2257 3889 3391 1671 160 34 20 chr10 16855810 16856103 -128733185 - AluJo SINE Alu -13 299 3 3348 187 43 88 chr10 16856103 16856425 -128732863 - L1 LINE L1 -2755 3391 3056 * 4621 153 109 68 chr10 16856423 16857534 -128731754 + L1MA9 LINE L1 4552 5616 -696 1377 184 59 26 chr10 16857534 16857832 -128731456 + AluJb SINE Alu 1 307 0 4621 153 109 68 chr10 16857832 16858058 -128731230 + L1MA9 LINE L1 5616 5831 -481 2281 117 3 0 chr10 16858058 16858366 -128730922 - AluSx SINE Alu -3 309 1 4621 153 109 68 chr10 16858366 16858691 -128730597 + L1MA9 LINE L1 5831 6273 -39 666 286 47 54 chr10 16858698 16859142 -128730146 - L1ME4a LINE L1 -47 6074 5634 278 299 9 37 chr10 16859167 16859274 -128730014 + MIR SINE MIR 20 123 -139 26 0 0 0 chr10 16859338 16859364 -128729924 + AT_rich Low_complexity Low_complexity 1 26 0 2306 133 25 33 chr10 16860250 16860617 -128728671 - THE1B LTR MaLR 0 364 1 281 301 141 64 chr10 16860848 16861004 -128728284 + L2 LINE L2 3105 3272 0 1778 181 3 3 chr10 16861094 16861397 -128727891 + AluJo SINE Alu 1 303 -9 2851 16 0 0 chr10 16862330 16862641 -128726647 - AluYa5 SINE Alu 0 311 1 1592 173 14 7 chr10 16862907 16863191 -128726097 - AluJo SINE Alu 0 312 27 2149 114 30 0 chr10 16863457 16863756 -128725532 - AluSq SINE Alu -5 308 1 267 314 115 26 chr10 16863816 16863972 -128725316 + MIR SINE MIR 29 198 -64 1631 193 3 10 chr10 16864206 16864501 -128724787 - AluJo SINE Alu -19 293 1 847 158 16 0 chr10 16864761 16864888 -128724400 - FLAM_C SINE Alu -4 129 1 519 250 67 0 chr10 16866120 16866300 -128722988 + L1ME LINE L1 4458 4649 -1497 * 878 229 80 53 chr10 16866296 16866470 -128722818 + L1ME LINE L1 5424 5592 -578 1642 197 71 71 chr10 16866470 16866936 -128722352 + MLT1C LTR MaLR 2 467 0 878 229 80 53 chr10 16866936 16866978 -128722310 + L1ME LINE L1 5592 5631 -539 2478 126 31 14 chr10 16866978 16867336 -128721952 + THE1B LTR MaLR 1 364 0 878 229 80 53 chr10 16867336 16867493 -128721795 + L1ME LINE L1 5631 5808 -362 198 167 0 0 chr10 16867499 16867529 -128721759 - MIR SINE MIR -24 238 209 * 623 296 72 66 chr10 16867527 16867708 -128721580 - L2 LINE L2 -99 3214 3036 1942 168 30 64 chr10 16867708 16868112 -128721176 + MLT1B LTR MaLR 1 390 0 623 296 72 66 chr10 16868112 16868418 -128720870 - L2 LINE L2 -277 3036 2722 2424 106 0 0 chr10 16868588 16868900 -128720388 + AluSx SINE Alu 1 312 0 1410 221 111 22 chr10 16869326 16869697 -128719591 + L1MC4 LINE L1 6476 6879 -1163 1896 176 0 0 chr10 16869697 16870009 -128719279 + AluJb SINE Alu 1 312 0 329 287 0 0 chr10 16870111 16870212 -128719076 + AluJb SINE Alu 202 302 0 653 202 84 22 chr10 16870255 16870433 -128718855 + L1MC4 LINE L1 6880 7068 -974 2114 114 0 4 chr10 16870648 16870929 -128718359 - AluSg SINE Alu -30 280 1 1103 232 187 27 chr10 16870929 16871159 -128718129 + L1MC4 LINE L1 7464 7656 -386 1726 155 13 43 chr10 16871159 16871463 -128717825 - AluJb SINE Alu -17 295 1 1103 232 187 27 chr10 16871463 16871607 -128717681 + L1MC4 LINE L1 7656 7898 -144 2150 217 58 26 chr10 16871662 16871887 -128717401 + L1MB5 LINE L1 5652 5868 -306 1639 140 21 92 chr10 16871887 16872223 -128717065 + AluJb SINE Alu 1 312 0 2150 217 58 26 chr10 16872223 16872519 -128716769 + L1MB5 LINE L1 5868 6174 0 2203 108 3 0 chr10 16872531 16872819 -128716469 + AluSx SINE Alu 1 289 -23 23 33 0 0 chr10 16872822 16872852 -128716436 + AT_rich Low_complexity Low_complexity 1 30 0 2200 134 0 0 chr10 16872854 16873159 -128716129 + AluSc SINE Alu 1 305 -4 1692 300 95 13 chr10 16873185 16873808 -128715480 - L2 LINE L2 -649 2665 1992 1528 142 58 52 chr10 16873809 16874153 -128715135 + MER4A LTR ERV1 1 346 -318 599 119 222 24 chr10 16874285 16874411 -128714877 + MER4C LTR ERV1 296 446 -19 1615 269 79 61 chr10 16874488 16874739 -128714549 - L1MCc LINE L1 -3667 3274 3029 1502 216 0 7 chr10 16874739 16875036 -128714252 + AluJo SINE Alu 1 295 -17 1615 269 79 61 chr10 16875036 16875182 -128714106 - L1MCc LINE L1 -3912 3029 2887 2328 88 0 28 chr10 16875182 16875502 -128713786 - AluY SINE Alu 0 311 1 1615 269 79 61 chr10 16875502 16876340 -128712948 - L1MCc LINE L1 -4054 2887 2030 299 169 17 0 chr10 16876347 16876406 -128712882 - AluSp/q SINE Alu 0 303 244 753 208 134 7 chr10 16876461 16876610 -128712678 - AluJb SINE Alu -59 253 86 855 288 79 26 chr10 16876610 16877287 -128712001 - L1MCc LINE L1 -4906 1517 1129 4042 113 13 0 chr10 16877637 16878184 -128711104 + MER41A LTR ERV1 1 554 0 2214 73 3 98 chr10 16878724 16878912 -128710376 - AluSp SINE Alu -6 297 152 2180 136 0 0 chr10 16878912 16879222 -128710066 - AluSx SINE Alu 0 312 3 2214 73 3 98 chr10 16879222 16879361 -128709927 - AluSp SINE Alu -151 152 1 3813 113 48 2 chr10 16879561 16880102 -128709186 + MER61E LTR ERV1 1 566 -3 527 247 88 18 chr10 16880216 16880386 -128708902 + MLT1C LTR MaLR 6 187 -280 1636 149 15 15 chr10 16880389 16880651 -128708637 + AluJo SINE Alu 12 273 -39 419 123 0 14 chr10 16880661 16880734 -128708554 + (GGA)n Simple_repeat Simple_repeat 1 72 0 1271 221 14 7 chr10 16880743 16881019 -128708269 + MLT1C LTR MaLR 188 465 -2 1778 135 12 0 chr10 16881395 16881654 -128707634 + AluSx SINE Alu 7 268 -44 234 91 0 0 chr10 16881664 16881697 -128707591 + (CA)n Simple_repeat Simple_repeat 2 34 0 3191 120 5 11 chr10 16881698 16882147 -128707141 + LTR8 LTR ERV1 246 691 0 499 223 150 50 chr10 16882165 16882385 -128706903 - MIR SINE MIR -12 250 9 921 178 25 93 chr10 16882784 16883020 -128706268 + AluJo SINE Alu 1 220 -92 2083 140 0 7 chr10 16883579 16883887 -128705401 - AluJb SINE Alu -6 306 1 1918 140 7 27 chr10 16884244 16884544 -128704744 + AluSx SINE Alu 1 294 -18 1782 157 0 7 chr10 16884980 16885267 -128704021 - AluJo SINE Alu -27 285 1 799 306 92 25 chr10 16885314 16885470 -128703818 - MLT1L LTR MaLR -8 607 463 619 216 9 0 chr10 16885470 16885581 -128703707 - MER81 DNA DNA -2 112 1 799 306 92 25 chr10 16885581 16885905 -128703383 - MLT1L LTR MaLR -152 463 95 1606 134 4 4 chr10 16885927 16886159 -128703129 + AluJo SINE Alu 43 274 -38 2028 128 0 0 chr10 16889078 16889360 -128699928 + AluSx SINE Alu 18 299 -13 864 168 0 0 chr10 16889417 16889548 -128699740 - FLAM_C SINE Alu -12 131 1 785 334 102 5 chr10 16889576 16889968 -128699320 + LTR16A LTR ERVL 1 430 -20 836 138 16 0 chr10 16890257 16890380 -128698908 - FLAM_C SINE Alu -7 126 2 1952 146 7 0 chr10 16890432 16890719 -128698569 + AluSx SINE Alu 5 293 -19 29 28 0 0 chr10 16890742 16890778 -128698510 + AT_rich Low_complexity Low_complexity 1 36 0 1228 269 99 17 chr10 16890976 16891564 -128697724 + L1ME2 LINE L1 3915 4550 -1596 1108 226 54 10 chr10 16891558 16891872 -128697416 + L1ME2 LINE L1 5579 5906 -258 * 1426 196 11 8 chr10 16891872 16892138 -128697150 + AluJo SINE Alu 1 267 -45 25 0 0 0 chr10 16892142 16892167 -128697121 + AT_rich Low_complexity Low_complexity 1 25 0 480 94 0 188 chr10 16892168 16892253 -128697035 - L1PB3 LINE L1 -2 6152 6093 2197 121 0 16 chr10 16892253 16892568 -128696720 - AluSx SINE Alu -2 310 1 480 94 0 188 chr10 16892568 16892599 -128696689 - L1PB3 LINE L1 -61 6093 6058 951 215 46 15 chr10 16892636 16892897 -128696391 + L1ME2 LINE L1 5896 6164 0 673 266 135 54 chr10 16893032 16893232 -128696056 - LTR33 LTR ERVL -8 513 331 1578 173 0 55 chr10 16893232 16893539 -128695749 + AluJo SINE Alu 1 290 -22 673 266 135 54 chr10 16893539 16893804 -128695484 - LTR33 LTR ERVL -190 331 10 885 148 0 15 chr10 16893910 16894045 -128695243 - FLAM_C SINE Alu 0 133 1 1082 265 95 8 chr10 16895527 16895927 -128693361 - Zaphod DNA AcHobo -1 4030 3596 936 187 117 35 chr10 16895956 16896272 -128693016 - Zaphod DNA AcHobo -3081 950 609 1084 164 0 17 chr10 16896280 16896457 -128692831 - AluJo/FRAM SINE Alu -5 307 134 1748 158 10 3 chr10 16896457 16896748 -128692540 - AluSx SINE Alu -16 296 4 513 283 26 112 chr10 16896752 16897056 -128692232 - Zaphod DNA AcHobo -3417 614 337 2383 105 0 0 chr10 16897066 16897371 -128691917 + AluSg SINE Alu 1 305 -5 364 284 16 74 chr10 16897410 16897530 -128691758 - Zaphod DNA AcHobo -3696 335 228 2313 107 3 0 chr10 16897530 16897829 -128691459 + AluSx SINE Alu 1 300 -12 364 284 16 74 chr10 16897829 16897898 -128691390 - Zaphod DNA AcHobo -3803 228 157 589 163 0 0 chr10 16898194 16898292 -128690996 + FLAM_C SINE Alu 13 110 -33 26 30 0 0 chr10 16898308 16898341 -128690947 + AT_rich Low_complexity Low_complexity 1 33 0 2146 119 7 0 chr10 16898359 16898654 -128690634 + AluSq SINE Alu 1 297 -16 992 151 0 12 chr10 16898696 16898868 -128690420 + L1MA6 LINE L1 6131 6300 0 1784 139 13 43 chr10 16899010 16899313 -128689975 - AluJb SINE Alu -18 294 1 1686 156 46 29 chr10 16899710 16900017 -128689271 - AluJo SINE Alu 0 312 1 2095 113 3 46 chr10 16900982 16901309 -128687979 + AluSq SINE Alu 1 313 0 1613 177 7 11 chr10 16901995 16902278 -128687010 + AluJb SINE Alu 1 282 -30 2165 118 7 0 chr10 16904095 16904392 -128684896 + AluSx SINE Alu 1 299 -13 1494 178 7 36 chr10 16905533 16905675 -128683613 + AluJo SINE Alu 1 133 -179 2248 102 7 0 chr10 16905675 16905968 -128683320 + AluSx SINE Alu 1 295 -17 1494 178 7 36 chr10 16905968 16906106 -128683182 + AluJo SINE Alu 133 273 -39 197 319 43 21 chr10 16906400 16906494 -128682794 + MIR SINE MIR 31 126 -136 661 210 0 108 chr10 16906549 16906667 -128682621 + MER69A DNA AcHobo 4 94 -2432 1581 138 88 72 chr10 16906667 16906972 -128682316 - AluJb SINE Alu 0 312 3 661 210 0 108 chr10 16906972 16907048 -128682240 + MER69A DNA AcHobo 94 177 0 2115 96 6 53 chr10 16907307 16907629 -128681659 + AluSg SINE Alu 1 307 -3 1884 166 3 3 chr10 16907754 16908062 -128681226 + AluJo SINE Alu 1 308 -4 904 217 81 83 chr10 16908235 16908289 -128680999 + LOR1b LTR ERV1 66 119 -342 2522 50 0 3 chr10 16908289 16908587 -128680701 - AluY SINE Alu -14 297 1 904 217 81 83 chr10 16908587 16908929 -128680359 + LOR1b LTR ERV1 119 461 0 1249 167 194 8 chr10 16909165 16909417 -128679871 - AluJo SINE Alu -13 299 1 207 167 0 0 chr10 16909495 16909537 -128679751 + CT-rich Low_complexity Low_complexity 3 44 0 2260 119 3 0 chr10 16909577 16909887 -128679401 - AluSx SINE Alu -1 311 1 349 264 38 130 chr10 16910059 16910298 -128678990 + L3 LINE CR1 583 799 -778 2183 106 0 17 chr10 16910367 16910659 -128678629 - AluSx SINE Alu -25 287 1 419 316 176 35 chr10 16910748 16911175 -128678113 + L3 LINE CR1 1021 1507 -70 1988 122 3 14 chr10 16911327 16911671 -128677617 + AluSx SINE Alu 1 341 0 385 259 0 53 chr10 16911726 16911857 -128677431 - L2 LINE L2 -7 3306 3183 209 331 39 62 chr10 16913634 16913764 -128675524 - L2 LINE L2 -1 3312 3186 1599 173 0 19 chr10 16913800 16914102 -128675186 - AluJb SINE Alu 0 318 22 2355 110 0 0 chr10 16914129 16914438 -128674850 + AluSg SINE Alu 1 309 -1 23 0 0 0 chr10 16914488 16914511 -128674777 + AT_rich Low_complexity Low_complexity 1 23 0 1333 123 5 5 chr10 16914531 16914718 -128674570 - AluSx SINE Alu -125 187 1 2065 127 7 0 chr10 16915106 16915397 -128673891 - AluSq SINE Alu -20 293 1 213 342 0 0 chr10 16915888 16915967 -128673321 + L2 LINE L2 2900 2978 -294 255 138 31 15 chr10 16916030 16916095 -128673193 + (TAA)n Simple_repeat Simple_repeat 2 67 0 1410 227 4 4 chr10 16916097 16916375 -128672913 - AluJo SINE Alu -28 284 7 1868 196 105 47 chr10 16916443 16916908 -128672380 - MLT1D LTR MaLR -10 495 4 2099 138 0 0 chr10 16917005 16917303 -128671985 + AluSx SINE Alu 1 298 -14 192 309 0 0 chr10 16917342 16917397 -128671891 + L2 LINE L2 3240 3294 -19 1568 104 35 35 chr10 16917619 16917850 -128671438 + AluSx SINE Alu 64 294 -18 640 281 6 0 chr10 16917850 16918010 -128671278 + MER58B DNA MER1_type 181 341 0 584 173 0 10 chr10 16918051 16918155 -128671133 - U13 snRNA snRNA -1 103 1 2072 154 0 0 chr10 16918172 16918470 -128670818 + AluSx SINE Alu 1 298 -14 194 0 39 0 chr10 16918546 16918572 -128670716 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1830 184 3 3 chr10 16918980 16919289 -128669999 + AluJb SINE Alu 1 309 -3 2453 64 0 0 chr10 16919486 16919820 -128669468 - AluY SINE Alu 0 334 1 281 292 32 52 chr10 16919942 16920096 -128669192 + MIR SINE MIR 47 197 -65 1843 137 4 14 chr10 16921173 16921450 -128667838 - AluJo SINE Alu -25 287 14 2767 156 8 35 chr10 16921796 16921894 -128667394 - MER66B LTR ERV1 0 486 387 2212 88 0 0 chr10 16921894 16922168 -128667120 - AluSg SINE Alu -18 292 19 2767 156 8 35 chr10 16922168 16922488 -128666800 - MER66B LTR ERV1 -99 387 80 1870 119 0 32 chr10 16922488 16922773 -128666515 - AluSx SINE Alu -36 276 1 2767 156 8 35 chr10 16922773 16922846 -128666442 - MER66B LTR ERV1 -406 80 7 217 360 27 9 chr10 16922880 16922991 -128666297 + MIR SINE MIR 50 162 -100 225 108 0 0 chr10 16924519 16924556 -128664732 + (TC)n Simple_repeat Simple_repeat 1 37 0 1790 160 34 0 chr10 16924635 16924928 -128664360 - AluJo SINE Alu -5 307 5 990 189 13 57 chr10 16925217 16925445 -128663843 - MER20 DNA MER1_type -1 218 1 2936 153 87 0 chr10 16925453 16925938 -128663350 + MER1A DNA MER1_type 1 527 0 1525 198 116 6 chr10 16926162 16926491 -128662797 + MLT1A1 LTR MaLR 1 365 0 343 298 43 43 chr10 16926545 16926733 -128662555 + MIR SINE MIR 20 207 -55 2044 105 7 7 chr10 16928640 16928917 -128660371 + AluSx SINE Alu 30 306 -6 225 119 0 0 chr10 16928952 16928994 -128660294 + (TC)n Simple_repeat Simple_repeat 2 43 0 222 118 0 0 chr10 16928994 16929028 -128660260 + (CA)n Simple_repeat Simple_repeat 1 34 0 536 141 0 0 chr10 16929884 16929962 -128659326 + AluS SINE Alu 2 79 -234 1006 188 12 6 chr10 16929962 16930132 -128659156 + Tigger3(Golem) DNA MER2_type 2858 3028 -1 186 191 0 0 chr10 16930312 16930359 -128658929 + A-rich Low_complexity Low_complexity 1 47 0 2237 120 0 0 chr10 16930466 16930765 -128658523 - AluSc SINE Alu -10 299 1 624 245 32 7 chr10 16931173 16931328 -128657960 - Zaphod DNA AcHobo -3407 624 466 1027 115 0 0 chr10 16931340 16931479 -128657809 - FLAM_C SINE Alu -1 142 4 886 282 55 11 chr10 16931484 16931757 -128657531 - Zaphod DNA AcHobo -3559 472 188 2170 135 0 3 chr10 16931834 16932137 -128657151 + AluSx SINE Alu 1 302 -10 684 225 0 0 chr10 16932137 16932297 -128656991 + GA-rich Low_complexity Low_complexity 1 160 0 1153 229 122 24 chr10 16932397 16932733 -128656555 - L1MC4 LINE L1 -1198 6844 6476 2172 134 0 0 chr10 16933161 16933468 -128655820 - AluSx SINE Alu -3 309 3 276 250 23 23 chr10 16933814 16933902 -128655386 - L1MC5 LINE L1 -36 7925 7838 820 152 0 0 chr10 16934206 16934331 -128654957 + FLAM_C SINE Alu 2 126 -7 565 149 190 0 chr10 16934484 16934605 -128654683 + FRAM SINE Alu 18 161 -15 1946 122 27 3 chr10 16934605 16934899 -128654389 + AluSc SINE Alu 1 301 -8 207 0 0 0 chr10 16935270 16935293 -128653995 + (A)n Simple_repeat Simple_repeat 1 23 0 348 295 16 74 chr10 16935332 16935452 -128653836 - Zaphod DNA AcHobo -3696 335 228 2162 120 3 0 chr10 16935452 16935751 -128653537 + AluSx SINE Alu 1 300 -12 348 295 16 74 chr10 16935751 16935820 -128653468 - Zaphod DNA AcHobo -3803 228 157 589 163 0 0 chr10 16936115 16936213 -128653075 + FLAM_C SINE Alu 13 110 -33 26 30 0 0 chr10 16936231 16936264 -128653024 + AT_rich Low_complexity Low_complexity 1 33 0 2146 119 7 0 chr10 16936282 16936577 -128652711 + AluSq SINE Alu 1 297 -16 992 151 0 12 chr10 16936619 16936791 -128652497 + L1MA6 LINE L1 6131 6300 0 1607 141 20 53 chr10 16936933 16937237 -128652051 - AluJb SINE Alu -18 294 1 7668 81 1 1 chr10 16937668 16938628 -128650660 + HERVL LTR ERVL 2716 3675 -1979 1367 194 23 27 chr10 16938986 16939285 -128650003 + AluJo SINE Alu 14 311 -1 1265 158 0 0 chr10 16939300 16939490 -128649798 + AluSx SINE Alu 16 205 -107 2237 123 3 0 chr10 16940187 16940487 -128648801 + AluSx SINE Alu 1 301 -11 246 62 0 0 chr10 16940582 16940614 -128648674 + (TCCA)n Simple_repeat Simple_repeat 3 34 0 200 329 80 59 chr10 16940842 16941079 -128648209 - L2 LINE L2 -219 3053 2812 986 153 6 0 chr10 16941753 16941930 -128647358 + GA-rich Low_complexity Low_complexity 3 180 0 633 186 7 71 chr10 16941934 16942074 -128647214 - FLAM_C SINE Alu -2 131 1 201 143 0 0 chr10 16942129 16942164 -128647124 + (TTCC)n Simple_repeat Simple_repeat 4 38 0 275 326 12 0 chr10 16942265 16942351 -128646937 - ERVL LTR ERVL -2560 3204 3118 1747 243 88 36 chr10 16942378 16942617 -128646671 - LTR68 LTR ERV1 -4 736 511 2256 127 0 0 chr10 16942617 16942925 -128646363 - AluSx SINE Alu -4 308 1 1747 243 88 36 chr10 16942925 16943295 -128645993 - LTR68 LTR ERV1 -229 511 1 1281 196 25 83 chr10 16943401 16943728 -128645560 - AluJb SINE Alu -4 308 1 2034 104 0 83 chr10 16943739 16944076 -128645212 - AluSx SINE Alu -3 309 1 2278 121 0 0 chr10 16944557 16944863 -128644425 - AluSx SINE Alu -6 306 1 2019 116 4 4 chr10 16945150 16945450 -128643838 - AluSx SINE Alu 0 315 16 498 171 0 45 chr10 16945896 16945984 -128643304 + MER21B LTR ERV1 1 84 -779 2127 116 0 3 chr10 16945987 16946272 -128643016 - AluSx SINE Alu -9 303 20 5333 67 4 3 chr10 16946278 16946955 -128642333 + MER4E LTR ERV1 89 766 0 2302 105 0 0 chr10 16947538 16947833 -128641455 + AluSx SINE Alu 6 300 -12 1911 151 7 0 chr10 16947848 16948127 -128641161 + AluSq SINE Alu 5 285 -28 1825 213 3 19 chr10 16948504 16948875 -128640413 - MLT1A1 LTR MaLR 0 365 1 591 219 0 8 chr10 16948944 16949063 -128640225 - FLAM_C SINE Alu -10 133 16 2005 125 4 4 chr10 16949346 16949654 -128639634 - AluSc SINE Alu 0 308 1 1862 143 3 44 chr10 16949657 16949972 -128639316 - AluJo SINE Alu -10 302 1 21 0 0 0 chr10 16950864 16950885 -128638403 + AT_rich Low_complexity Low_complexity 1 21 0 775 123 15 23 chr10 16952340 16952470 -128636818 + FLAM_C SINE Alu 4 132 -1 2215 119 7 0 chr10 16952879 16953173 -128636115 + AluSx SINE Alu 1 296 -16 1822 152 6 48 chr10 16953429 16953603 -128635685 - AluJo SINE Alu -9 303 123 188 35 35 0 chr10 16953603 16953632 -128635656 + (TTG)n Simple_repeat Simple_repeat 1 30 0 2073 132 0 0 chr10 16953632 16953913 -128635375 - AluSx SINE Alu -31 281 1 1822 152 6 48 chr10 16953913 16954053 -128635235 - AluJo SINE Alu -187 125 1 211 278 0 42 chr10 16954389 16954461 -128634827 + MIR3 SINE MIR 138 206 -2 216 97 0 0 chr10 16954708 16954739 -128634549 + (CA)n Simple_repeat Simple_repeat 1 31 0 199 258 97 0 chr10 16954827 16954889 -128634399 - MIR SINE MIR -1 261 194 1703 158 0 7 chr10 16954897 16955169 -128634119 - AluJo SINE Alu -16 296 27 270 278 193 52 chr10 16955188 16955226 -128634062 + MIR SINE MIR 21 52 -210 2546 98 13 16 chr10 16955226 16955602 -128633686 - THE1C LTR MaLR 0 375 1 270 278 193 52 chr10 16955602 16955775 -128633513 + MIR SINE MIR 52 262 0 2183 115 3 3 chr10 16956003 16956298 -128632990 - AluSx SINE Alu -17 295 1 1644 124 9 0 chr10 16956298 16956530 -128632758 - AluSg/x SINE Alu -14 298 65 446 175 12 0 chr10 16956797 16956877 -128632411 - MLT1J LTR MaLR -359 152 72 219 304 116 9 chr10 16956940 16957052 -128632236 - MIR SINE MIR -108 154 31 34 55 0 0 chr10 16957221 16957276 -128632012 + AT_rich Low_complexity Low_complexity 1 55 0 1803 157 0 26 chr10 16957448 16957753 -128631535 - AluJb SINE Alu -15 297 1 456 165 13 0 chr10 16958259 16958338 -128630950 - MLT1J2 LTR MaLR -2 448 369 1192 131 0 0 chr10 16958360 16958528 -128630760 - AluSg/x SINE Alu -8 304 137 736 243 98 8 chr10 16958564 16958855 -128630433 - MLT1J2 LTR MaLR -103 343 20 1904 132 8 0 chr10 16958980 16959246 -128630042 + AluSx SINE Alu 14 281 -31 577 94 58 0 chr10 16959248 16959386 -128629902 + (TA)n Simple_repeat Simple_repeat 2 147 0 2049 187 80 67 chr10 16959541 16959894 -128629394 - L1MB4 LINE L1 0 6180 5814 2210 129 0 3 chr10 16959894 16960205 -128629083 - AluSq SINE Alu -3 310 1 2049 187 80 67 chr10 16960205 16960466 -128628822 - L1MB4 LINE L1 -366 5814 5558 2249 76 31 3 chr10 16960613 16960901 -128628387 + AluSc SINE Alu 1 296 -13 1720 167 3 50 chr10 16961958 16962134 -128627154 - AluSx SINE Alu -4 308 125 216 0 0 0 chr10 16962134 16962158 -128627130 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1996 123 14 0 chr10 16962158 16962311 -128626977 - AluSg1 SINE Alu -28 281 121 189 74 0 0 chr10 16962311 16962338 -128626950 + (TG)n Simple_repeat Simple_repeat 2 28 0 1996 123 14 0 chr10 16962338 16962461 -128626827 - AluSg1 SINE Alu -188 121 1 1720 167 3 50 chr10 16962461 16962606 -128626682 - AluSx SINE Alu -185 127 1 2169 125 3 0 chr10 16962870 16963165 -128626123 - AluSx SINE Alu -16 296 1 2099 116 0 10 chr10 16963741 16964052 -128625236 + AluSx SINE Alu 3 312 0 1819 144 0 4 chr10 16964381 16964651 -128624637 + AluJo SINE Alu 1 269 -43 21 0 0 0 chr10 16964657 16964678 -128624610 + AT_rich Low_complexity Low_complexity 1 21 0 2855 132 73 119 chr10 16964695 16965378 -128623910 + MER39B LTR ERV1 2 653 0 1803 97 14 42 chr10 16966366 16966654 -128622634 - AluJo SINE Alu -11 301 22 2316 94 7 0 chr10 16967038 16967335 -128621953 - AluSg SINE Alu -11 299 1 1335 154 50 93 chr10 16967341 16967621 -128621667 - AluJb SINE Alu -25 287 20 272 136 45 0 chr10 16967755 16967799 -128621489 + AluJo SINE Alu 118 163 -139 1902 116 33 7 chr10 16967812 16968088 -128621200 + AluSx SINE Alu 18 300 -12 188 208 57 0 chr10 16968351 16968404 -128620884 - L2 LINE L2 -1241 2073 2018 837 142 0 15 chr10 16968878 16969012 -128620276 - FLAM_C SINE Alu -1 132 1 1886 131 60 7 chr10 16969217 16969500 -128619788 - AluSx SINE Alu -14 298 1 192 158 0 0 chr10 16969552 16969590 -128619698 + A-rich Low_complexity Low_complexity 1 38 0 1097 248 57 19 chr10 16969708 16970026 -128619262 + MLT1I LTR MaLR 71 400 -9 818 95 26 9 chr10 16971638 16971754 -128617534 + FLAM_C SINE Alu 1 118 -25 2103 132 26 0 chr10 16971847 16972150 -128617138 + AluSx SINE Alu 1 311 -1 1977 163 89 6 chr10 16972227 16972577 -128616711 - MLT1B LTR MaLR -9 381 3 2246 92 24 0 chr10 16973148 16973442 -128615846 - AluSc SINE Alu -8 301 1 646 134 177 49 chr10 16973442 16973606 -128615682 - AluJo SINE Alu -15 297 113 841 144 0 0 chr10 16973716 16973841 -128615447 - AluJo SINE Alu -176 126 2 286 250 23 23 chr10 16974145 16974233 -128615055 + L1MC5 LINE L1 7838 7925 -36 1173 108 0 24 chr10 16974415 16974582 -128614706 + AluSg/x SINE Alu 137 299 -13 1327 143 9 19 chr10 16975370 16975586 -128613702 - AluSg/x SINE Alu -15 297 84 207 0 0 0 chr10 16975914 16975937 -128613351 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1990 161 0 0 chr10 16975939 16976238 -128613050 - AluSx SINE Alu -13 299 1 1785 164 22 22 chr10 16976238 16976550 -128612738 - AluJo SINE Alu 0 312 1 13002 83 1 1 chr10 16976894 16978529 -128610759 - HERVL-A2 LTR ERVL -1979 3675 2041 662 87 0 39 chr10 16978573 16978676 -128610612 - AluSg/x SINE Alu -4 305 207 11001 112 5 6 chr10 16978676 16980194 -128609094 - HERVL-A2 LTR ERVL -4100 1554 39 1932 151 32 11 chr10 16980194 16980549 -128608739 - MLT2A2 LTR ERVL -149 304 1 2200 129 0 10 chr10 16980577 16980888 -128608400 + AluSx SINE Alu 2 309 -3 326 257 0 19 chr10 16981077 16981182 -128608106 + MER113 DNA MER1_type? 12 114 -407 261 139 0 0 chr10 16981344 16981387 -128607901 + (CA)n Simple_repeat Simple_repeat 2 44 0 1957 162 0 19 chr10 16981443 16981752 -128607536 - AluSx SINE Alu -9 303 1 420 219 0 0 chr10 16981768 16981896 -128607392 + CT-rich Low_complexity Low_complexity 1 128 0 2071 117 11 0 chr10 16981916 16982199 -128607089 - AluSx SINE Alu -26 286 1 788 157 0 0 chr10 16982250 16982365 -128606923 - FLAM_C SINE Alu -18 115 1 188 163 23 0 chr10 16982497 16982540 -128606748 + (TA)n Simple_repeat Simple_repeat 2 45 0 445 209 45 18 chr10 16983019 16983129 -128606159 - MIR3 SINE MIR -4 204 92 2117 124 14 3 chr10 16983443 16983733 -128605555 + AluSx SINE Alu 2 294 -18 251 108 36 60 chr10 16983926 16984009 -128605279 + (TAA)n Simple_repeat Simple_repeat 1 81 0 1909 176 0 0 chr10 16984096 16984398 -128604890 + AluJb SINE Alu 1 302 -10 1744 187 7 0 chr10 16984561 16984850 -128604438 + AluJo SINE Alu 4 294 -18 241 242 32 0 chr10 16985367 16985429 -128603859 - L2 LINE L2 0 3272 3209 1909 123 93 30 chr10 16985900 16986233 -128603055 + THE1B LTR MaLR 1 354 -10 2502 39 0 3 chr10 16986346 16986662 -128602626 - AluY SINE Alu 0 315 1 1917 140 3 32 chr10 16986750 16987058 -128602230 - AluSx SINE Alu -13 299 1 286 288 62 27 chr10 16988113 16988259 -128601029 - L1ME4a LINE L1 -14 6107 5957 1906 128 7 3 chr10 16988873 16989197 -128600091 - AluSp SINE Alu 0 325 1 192 338 13 0 chr10 16989550 16989627 -128599661 + MIR3 SINE MIR 117 194 -14 24 77 0 0 chr10 16989660 16989712 -128599576 + AT_rich Low_complexity Low_complexity 1 52 0 21 57 0 0 chr10 16989819 16989854 -128599434 + AT_rich Low_complexity Low_complexity 1 35 0 1891 104 82 0 chr10 16989898 16990166 -128599122 - AluSx SINE Alu -22 290 1 202 202 0 45 chr10 16990427 16990516 -128598772 + (TTAAA)n Simple_repeat Simple_repeat 3 87 0 2245 117 0 0 chr10 16991137 16991435 -128597853 - AluSq SINE Alu -15 298 1 2293 117 0 0 chr10 16991720 16992020 -128597268 - AluSx SINE Alu -12 300 1 16153 59 4 4 chr10 16992173 16994213 -128595075 + L1P LINE L1 267 2307 -3839 1627 124 0 28 chr10 16994313 16994563 -128594725 + AluY SINE Alu 62 304 -7 2284 93 0 16 chr10 16994746 16995056 -128594232 - AluSx SINE Alu -7 305 1 194 321 0 0 chr10 16995199 16995255 -128594033 - L3b LINE CR1 -263 1320 1265 * 197 179 26 0 chr10 16995252 16995291 -128593997 + MIR SINE MIR 118 157 -105 2592 115 3 6 chr10 16996129 16996494 -128592794 - THE1B LTR MaLR 0 364 1 2071 153 30 21 chr10 16997037 16997409 -128591879 - THE1C LTR MaLR 0 375 1 2053 138 0 0 chr10 16997707 16997996 -128591292 - AluSx SINE Alu -23 289 1 1865 163 15 18 chr10 16998437 16998768 -128590520 + MER44D DNA MER2_type 10 609 0 1928 144 38 0 chr10 16998871 16999163 -128590125 + AluSq SINE Alu 2 304 -9 2226 113 0 0 chr10 16999400 16999693 -128589595 + AluSx SINE Alu 1 293 -19 1870 159 3 19 chr10 17000033 17000342 -128588946 + AluJo SINE Alu 1 304 -8 238 328 98 29 chr10 17000764 17000938 -128588350 - L2 LINE L2 -671 2643 2458 1212 161 13 27 chr10 17000996 17001220 -128588068 - AluJo SINE Alu -91 221 1 189 94 0 0 chr10 17001221 17001253 -128588035 + (T)n Simple_repeat Simple_repeat 1 32 0 290 271 225 0 chr10 17001498 17001627 -128587661 + MIR SINE MIR 93 250 -12 2255 108 0 0 chr10 17001830 17002125 -128587163 + AluSx SINE Alu 5 299 -13 763 228 138 105 chr10 17002743 17003314 -128585974 - L1ME4a LINE L1 -3 6118 5529 21 36 0 0 chr10 17003575 17003603 -128585685 + AT_rich Low_complexity Low_complexity 1 28 0 2453 133 23 0 chr10 17003648 17004002 -128585286 + THE1B LTR MaLR 3 364 0 905 70 0 0 chr10 17004774 17004888 -128584400 + AluSg/x SINE Alu 195 308 -2 245 207 146 37 chr10 17005121 17005203 -128584085 + MIR SINE MIR 77 167 -95 1559 114 0 5 chr10 17005276 17005487 -128583801 + AluSg SINE Alu 1 210 -100 1797 194 14 20 chr10 17005887 17005946 -128583342 - MLT1A1 LTR MaLR -12 353 295 2199 113 0 3 chr10 17005946 17006247 -128583041 + AluSg SINE Alu 1 300 -10 1797 194 14 20 chr10 17006247 17006532 -128582756 - MLT1A1 LTR MaLR -70 295 11 384 280 158 67 chr10 17006536 17007012 -128582276 - MLT1H1 LTR MaLR -29 526 2 462 68 0 0 chr10 17007343 17007402 -128581886 + U2 snRNA snRNA 1 59 -129 21 0 0 0 chr10 17007417 17007438 -128581850 + AT_rich Low_complexity Low_complexity 1 21 0 2151 103 7 0 chr10 17007438 17007720 -128581568 - AluSg SINE Alu -26 284 1 251 269 65 32 chr10 17007803 17007896 -128581392 - MIR SINE MIR -114 148 53 1645 185 30 20 chr10 17007904 17008202 -128581086 - AluJb SINE Alu -10 302 2 1832 184 7 0 chr10 17008239 17008544 -128580744 - AluJo SINE Alu -5 307 1 402 21 0 0 chr10 17008599 17008646 -128580642 + (TAGA)n Simple_repeat Simple_repeat 3 49 0 932 144 0 0 chr10 17008685 17008817 -128580471 - AluSq/x SINE Alu -180 132 1 390 251 24 9 chr10 17008936 17009046 -128580242 - MIR3 SINE MIR -40 168 56 2257 107 0 0 chr10 17009676 17009974 -128579314 - AluSq SINE Alu -15 298 1 290 122 0 0 chr10 17011287 17011328 -128577960 + MADE1 DNA Mariner 1 41 -39 1989 140 14 0 chr10 17012110 17012403 -128576885 - AluSx SINE Alu -9 303 7 410 271 96 23 chr10 17012576 17012753 -128576535 - MLT1K LTR MaLR 0 588 399 2431 133 93 6 chr10 17013463 17013937 -128575351 - L1MA2 LINE L1 0 6304 5790 291 280 0 0 chr10 17014252 17014327 -128574961 + LTR16C LTR ERVL 414 488 -3 221 343 0 27 chr10 17014327 17014400 -128574888 - MIR SINE MIR -190 72 2 1876 101 4 4 chr10 17014412 17014659 -128574629 + AluSq SINE Alu 35 281 -32 194 0 39 0 chr10 17014659 17014685 -128574603 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 311 181 64 29 chr10 17015411 17015582 -128573706 + (CCGCG)n Simple_repeat Simple_repeat 4 180 0 312 330 28 0 chr10 17015973 17016079 -128573209 + MIR SINE MIR 81 189 -73 1724 159 135 24 chr10 17016125 17016496 -128572792 - MSTA LTR MaLR 0 428 17 6124 182 13 6 chr10 17016908 17018498 -128570790 - L1MC1 LINE L1 -25 6308 4708 1224 175 61 8 chr10 17018660 17018924 -128570364 - L1M LINE L1 -801 5345 5074 3382 211 39 7 chr10 17018925 17019751 -128569537 + L1 LINE L1 4160 5011 -1135 306 287 10 20 chr10 17021847 17021948 -128567340 - MIR SINE MIR -72 190 91 27 0 0 0 chr10 17022070 17022097 -128567191 + AT_rich Low_complexity Low_complexity 1 27 0 618 260 148 9 chr10 17022847 17023070 -128566218 + MIR SINE MIR 2 255 -7 9224 71 2 11 chr10 17024009 17025294 -128563994 + L1P LINE L1 685 2091 -4055 357 214 36 0 chr10 17025433 17025517 -128563771 - MLT2E LTR ERVL -35 593 507 2116 129 0 20 chr10 17025558 17025860 -128563428 - AluSx SINE Alu -16 296 1 190 396 42 7 chr10 17027796 17027940 -128561348 - MIR SINE MIR -6 256 108 2249 102 0 3 chr10 17028153 17028447 -128560841 - AluSx SINE Alu -19 293 1 26 30 0 0 chr10 17028447 17028480 -128560808 + AT_rich Low_complexity Low_complexity 1 33 0 1967 133 7 20 chr10 17028930 17029230 -128560058 + AluSx SINE Alu 1 296 -16 198 0 0 0 chr10 17029675 17029697 -128559591 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 214 288 0 0 chr10 17030807 17030866 -128558422 + (TA)n Simple_repeat Simple_repeat 1 59 0 655 215 0 30 chr10 17031177 17031312 -128557976 + FLAM_A SINE Alu 1 131 -2 1101 227 102 69 chr10 17032531 17032980 -128556308 - MLT1C LTR MaLR 0 467 4 533 93 67 0 chr10 17033282 17033357 -128555931 + AluJ/FRAM SINE Alu 216 295 -17 24 0 0 0 chr10 17033943 17033967 -128555321 + AT_rich Low_complexity Low_complexity 1 24 0 225 0 0 0 chr10 17033968 17033993 -128555295 + (GA)n Simple_repeat Simple_repeat 1 25 0 1573 203 0 0 chr10 17033997 17034268 -128555020 - AluJb SINE Alu -41 271 1 758 259 64 69 chr10 17034288 17034836 -128554452 - L1MEd LINE L1 -4867 1252 708 631 138 26 10 chr10 17034991 17035186 -128554102 - L1MB2 LINE L1 -1 6170 5887 330 318 96 70 chr10 17035186 17035349 -128553939 - L1MEd LINE L1 -5555 564 407 2223 167 19 3 chr10 17035349 17035709 -128553579 - MER47A DNA MER2_type 0 366 1 330 318 96 70 chr10 17035709 17036086 -128553202 - L1MEd LINE L1 -5712 407 10 272 197 0 14 chr10 17036299 17036370 -128552918 + (CATATA)n Simple_repeat Simple_repeat 2 71 0 183 247 202 22 chr10 17038386 17038475 -128550813 - L2 LINE L2 0 3272 3168 690 148 14 84 chr10 17038790 17038932 -128550356 - FLAM_C SINE Alu -1 132 1 281 247 0 11 chr10 17039031 17039124 -128550164 + GA-rich Low_complexity Low_complexity 1 92 0 24 0 0 0 chr10 17040142 17040166 -128549122 + AT_rich Low_complexity Low_complexity 1 24 0 22 70 0 0 chr10 17040331 17040374 -128548914 + AT_rich Low_complexity Low_complexity 1 43 0 2172 133 3 0 chr10 17040532 17040833 -128548455 - AluSx SINE Alu -10 302 1 308 313 101 80 chr10 17041466 17042168 -128547120 + L2 LINE L2 2538 3267 -5 246 62 0 0 chr10 17042170 17042202 -128547086 + (TGGA)n Simple_repeat Simple_repeat 3 34 0 2220 123 3 0 chr10 17042297 17042597 -128546691 - AluSx SINE Alu -11 301 1 2075 100 13 39 chr10 17043654 17043963 -128545325 + AluSx SINE Alu 1 301 -11 365 250 158 18 chr10 17044401 17044565 -128544723 + MIR SINE MIR 8 194 -68 1699 158 0 21 chr10 17044772 17045098 -128544190 - AluJb SINE Alu 0 329 10 692 131 62 46 chr10 17045258 17045388 -128543900 - FLAM_C SINE Alu 0 143 12 1812 133 0 84 chr10 17045592 17045915 -128543373 - AluJo SINE Alu -16 296 1 1036 173 0 0 chr10 17046093 17046266 -128543022 - FRAM SINE Alu -1 175 3 2222 129 3 0 chr10 17046283 17046594 -128542694 - AluSx SINE Alu 0 312 1 516 32 0 0 chr10 17046692 17046754 -128542534 + (CA)n Simple_repeat Simple_repeat 2 63 0 336 264 11 0 chr10 17047237 17047324 -128541964 + MIR SINE MIR 167 254 -8 2344 100 0 0 chr10 17048073 17048374 -128540914 + AluSx SINE Alu 4 304 -8 198 0 0 0 chr10 17048429 17048451 -128540837 + (T)n Simple_repeat Simple_repeat 1 22 0 1003 128 0 0 chr10 17048451 17048584 -128540704 - AluSq/x SINE Alu -179 133 1 2019 115 28 7 chr10 17048596 17048757 -128540531 - AluSx SINE Alu -18 294 123 2360 112 0 3 chr10 17048757 17049069 -128540219 - AluSx SINE Alu -1 311 1 2019 115 28 7 chr10 17049069 17049195 -128540093 - AluSx SINE Alu -189 123 1 35 24 0 0 chr10 17049743 17049785 -128539503 + AT_rich Low_complexity Low_complexity 1 42 0 864 319 63 13 chr10 17049858 17050241 -128539047 + MARNA DNA Mariner 170 571 -15 190 343 121 28 chr10 17051270 17051701 -128537587 - L2 LINE L2 -1131 2183 1713 353 175 0 12 chr10 17052565 17052645 -128536643 + (TA)n Simple_repeat Simple_repeat 2 80 0 185 322 30 69 chr10 17052650 17052852 -128536436 - L2 LINE L2 -2408 906 713 21 36 0 0 chr10 17053189 17053217 -128536071 + AT_rich Low_complexity Low_complexity 1 28 0 2647 58 0 0 chr10 17053421 17053732 -128535556 - AluY SINE Alu 0 311 1 29 60 0 0 chr10 17054018 17054068 -128535220 + AT_rich Low_complexity Low_complexity 1 50 0 22 0 0 0 chr10 17055233 17055255 -128534033 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr10 17058074 17058098 -128531190 + AT_rich Low_complexity Low_complexity 1 24 0 211 254 42 17 chr10 17058757 17058875 -128530413 + (TA)n Simple_repeat Simple_repeat 2 122 0 25 31 0 0 chr10 17063530 17063562 -128525726 + AT_rich Low_complexity Low_complexity 1 32 0 23 33 0 0 chr10 17064316 17064346 -128524942 + AT_rich Low_complexity Low_complexity 1 30 0 214 278 35 26 chr10 17065724 17065839 -128523449 + C-rich Low_complexity Low_complexity 4 119 0 26 0 0 0 chr10 17066101 17066127 -128523161 + GC_rich Low_complexity Low_complexity 1 26 0 24 77 0 0 chr10 17066692 17066744 -128522544 + GC_rich Low_complexity Low_complexity 1 52 0 27 73 0 0 chr10 17067051 17067106 -128522182 + GC_rich Low_complexity Low_complexity 1 55 0 189 0 0 0 chr10 17068626 17068647 -128520641 + (TTTC)n Simple_repeat Simple_repeat 3 23 0 644 307 69 5 chr10 17070670 17070888 -128518400 + MIR SINE MIR 29 260 -2 1897 139 6 52 chr10 17071413 17071737 -128517551 - AluSx SINE Alu -3 309 1 375 159 0 40 chr10 17073599 17073819 -128515469 + AluJo SINE Alu 1 292 -10 1488 191 10 48 chr10 17074386 17074695 -128514593 - AluJo SINE Alu -13 299 3 21 0 0 0 chr10 17075588 17075609 -128513679 + AT_rich Low_complexity Low_complexity 1 21 0 1514 185 36 45 chr10 17077287 17077595 -128511693 + AluJb SINE Alu 2 306 -6 1076 90 0 0 chr10 17077853 17077986 -128511302 + AluSq/x SINE Alu 1 133 -180 2180 132 7 0 chr10 17077989 17078332 -128510956 + AluSx SINE Alu 1 345 0 2181 99 7 3 chr10 17078685 17078978 -128510310 - AluSc SINE Alu -15 294 1 2358 109 0 0 chr10 17079967 17080278 -128509010 + AluSx SINE Alu 1 311 -1 886 189 19 61 chr10 17080557 17080728 -128508560 + MER3 DNA MER1_type 7 169 -40 2199 116 0 3 chr10 17080728 17081022 -128508266 + AluSx SINE Alu 1 293 -19 886 189 19 61 chr10 17081022 17081062 -128508226 + MER3 DNA MER1_type 169 209 0 183 208 0 38 chr10 17081089 17081142 -128508146 + L3b LINE CR1 1303 1353 -230 1710 165 84 14 chr10 17081247 17081604 -128507684 - MLT1B LTR MaLR -8 382 1 285 29 0 0 chr10 17082431 17082465 -128506823 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 722 133 106 0 chr10 17082465 17082578 -128506710 - FLAM_C SINE Alu -17 126 2 225 333 83 0 chr10 17082586 17082694 -128506594 + L2 LINE L2 3011 3127 -186 1472 166 85 30 chr10 17082696 17082991 -128506297 + MLT1B LTR MaLR 1 311 -79 203 156 44 0 chr10 17083015 17083060 -128506228 + T-rich Low_complexity Low_complexity 2 48 0 1466 135 11 135 chr10 17083227 17083496 -128505792 + MLT1B LTR MaLR 85 303 -87 1826 172 3 10 chr10 17083496 17083798 -128505490 - AluSx SINE Alu -8 304 5 1466 135 11 135 chr10 17083798 17083877 -128505411 + MLT1B LTR MaLR 303 390 0 359 274 71 0 chr10 17083917 17084030 -128505258 + L2 LINE L2 3174 3294 -19 191 313 15 0 chr10 17084420 17084487 -128504801 + L2 LINE L2 3244 3311 -2 224 177 32 0 chr10 17085007 17085069 -128504219 + A-rich Low_complexity Low_complexity 5 68 0 429 20 0 0 chr10 17085486 17085536 -128503752 + (TG)n Simple_repeat Simple_repeat 2 51 0 192 254 90 0 chr10 17085673 17085740 -128503548 - L2 LINE L2 -678 2636 2564 209 285 77 29 chr10 17085898 17086069 -128503219 - L2 LINE L2 -333 2980 2793 1002 153 44 57 chr10 17086140 17086152 -128503136 - L1MC2 LINE L1 -1 6343 6332 2113 118 7 0 chr10 17086152 17086448 -128502840 + AluSx SINE Alu 1 298 -14 1002 153 44 57 chr10 17086448 17086663 -128502625 - L1MC2 LINE L1 -12 6332 6119 1556 156 31 116 chr10 17086749 17087173 -128502115 + MLT1B LTR MaLR 1 388 -2 504 165 0 0 chr10 17087211 17087290 -128501998 + AluJ/FLAM SINE Alu 2 80 -232 1574 179 7 21 chr10 17087291 17087576 -128501712 - AluJo SINE Alu -31 281 1 1772 137 108 17 chr10 17087836 17088180 -128501108 + THE1C LTR MaLR 1 375 0 2140 111 0 27 chr10 17089091 17089388 -128499900 - AluSx SINE Alu -23 289 1 207 0 0 0 chr10 17089887 17089910 -128499378 + (A)n Simple_repeat Simple_repeat 1 23 0 2081 72 0 4 chr10 17091312 17091563 -128497725 + AluSc SINE Alu 41 290 -19 2389 155 62 0 chr10 17091787 17092188 -128497100 + MSTB LTR MaLR 1 426 0 594 272 53 0 chr10 17092460 17092629 -128496659 - MIR SINE MIR -32 230 53 180 0 0 0 chr10 17092681 17092701 -128496587 + (TGGGGG)n Simple_repeat Simple_repeat 1 20 0 2665 114 48 29 chr10 17092777 17093125 -128496163 + MSTA LTR MaLR 1 360 -68 2475 72 9 9 chr10 17093125 17093459 -128495829 - L1PA8 LINE L1 0 6172 5839 2665 114 48 29 chr10 17093459 17093530 -128495758 + MSTA LTR MaLR 360 428 0 1033 216 32 5 chr10 17093531 17093749 -128495539 - MER58A DNA MER1_type 0 224 1 1487 151 76 31 chr10 17095331 17095648 -128493640 + THE1C LTR MaLR 1 331 -44 1439 179 4 0 chr10 17095648 17095882 -128493406 - AluSq SINE Alu -78 235 1 265 146 0 0 chr10 17095882 17095923 -128493365 + THE1C LTR MaLR 388 428 0 2418 110 0 0 chr10 17096353 17096661 -128492627 + AluSx SINE Alu 1 308 -4 2202 90 7 20 chr10 17096746 17097046 -128492242 - AluY SINE Alu -15 296 1 454 116 0 197 chr10 17098128 17098209 -128491079 + MER63 DNA MER1_type 600 641 -419 2167 112 21 0 chr10 17098209 17098494 -128490794 + AluSx SINE Alu 1 291 -21 454 116 0 197 chr10 17098494 17098559 -128490729 + MER63 DNA MER1_type 641 717 -343 771 229 78 23 chr10 17098850 17099068 -128490220 + MER63C DNA MER1_type 169 398 -532 2530 122 5 0 chr10 17099068 17099437 -128489851 - L1PB1 LINE L1 0 6151 5781 2057 134 0 13 chr10 17099465 17099764 -128489524 + AluSc SINE Alu 8 302 -7 988 191 0 0 chr10 17099772 17099934 -128489354 + FRAM SINE Alu 1 161 -15 361 207 99 9 chr10 17099946 17100057 -128489231 + L1MC5 LINE L1 6738 6858 -1103 718 125 0 10 chr10 17100058 17100162 -128489126 + FLAM_C SINE Alu 17 119 -24 717 130 0 7 chr10 17100162 17100291 -128488997 - L1M2 LINE L1 -386 5780 5656 2125 124 0 3 chr10 17100320 17100611 -128488677 + AluSq SINE Alu 1 290 -23 214 359 88 19 chr10 17100664 17100823 -128488465 - L2 LINE L2 -908 2406 2237 2155 56 0 4 chr10 17101513 17101782 -128487506 + L1PA10 LINE L1 5712 5979 -189 206 380 28 42 chr10 17102050 17102192 -128487096 + MIR3 SINE MIR 16 155 -53 285 350 81 0 chr10 17102831 17102954 -128486334 - MIR3 SINE MIR -3 205 73 199 321 7 102 chr10 17102968 17103105 -128486183 + L2 LINE L2 2930 3053 -219 644 298 13 14 chr10 17103188 17103373 -128485915 - MIR SINE MIR -62 146 2 215 287 111 50 chr10 17103379 17103560 -128485728 + L2 LINE L2 3105 3296 -17 2144 125 0 0 chr10 17103598 17103893 -128485395 + AluSx SINE Alu 1 295 -17 234 0 0 0 chr10 17104330 17104356 -128484932 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1996 140 0 34 chr10 17104358 17104680 -128484608 - AluSx SINE Alu -1 311 1 527 65 0 0 chr10 17104827 17104889 -128484399 - Alu SINE Alu -255 63 2 689 252 73 32 chr10 17105962 17106141 -128483147 + MIR SINE MIR 28 219 -43 2221 134 0 3 chr10 17106141 17106454 -128482834 + AluSx SINE Alu 1 312 0 689 252 73 32 chr10 17106454 17106492 -128482796 + MIR SINE MIR 219 254 -8 297 333 94 22 chr10 17106678 17106858 -128482430 - MIR3 SINE MIR -9 199 7 798 288 72 104 chr10 17109390 17110056 -128479232 + L1ME4a LINE L1 28 713 -5406 393 22 0 0 chr10 17110056 17110102 -128479186 + (CA)n Simple_repeat Simple_repeat 2 47 0 798 288 72 104 chr10 17110102 17110438 -128478850 + L1ME4a LINE L1 713 992 -5127 1959 152 3 7 chr10 17110438 17110740 -128478548 + AluSx SINE Alu 1 301 -11 798 288 72 104 chr10 17110740 17110882 -128478406 + L1ME4a LINE L1 992 1137 -4982 2235 222 48 54 chr10 17110910 17111428 -128477860 - LTR40a LTR ERVL -1 518 4 528 268 42 84 chr10 17111605 17112509 -128476779 + L1ME4a LINE L1 4608 5260 -869 2168 125 0 0 chr10 17112640 17112944 -128476344 - AluSx SINE Alu -8 304 1 2182 111 10 0 chr10 17113377 17113675 -128475613 - AluSx SINE Alu -11 301 1 299 316 18 6 chr10 17114941 17115112 -128474176 + L1ME4a LINE L1 5693 5865 -239 727 214 146 10 chr10 17115438 17115630 -128473658 - Tigger1 DNA MER2_type 0 2418 2201 539 182 250 20 chr10 17115597 17115745 -128473543 - Tigger1 DNA MER2_type -2236 182 1 * 310 355 138 5 chr10 17115846 17116063 -128473225 - MIR SINE MIR -4 258 13 1503 177 37 27 chr10 17116310 17116609 -128472679 - AluJo SINE Alu -10 302 1 806 192 23 17 chr10 17116685 17116857 -128472431 - AluSg/x SINE Alu 0 312 140 750 133 88 9 chr10 17117411 17117524 -128471764 + AluSq/x SINE Alu 5 126 -186 2313 92 0 3 chr10 17117527 17117822 -128471466 + AluSc SINE Alu 3 296 -13 2693 130 8 0 chr10 17117824 17118209 -128471079 - MER75 DNA T2_type -126 388 1 260 300 86 7 chr10 17118253 17118393 -128470895 + HAL1b LINE L1 506 656 -692 949 126 0 0 chr10 17118441 17118576 -128470712 + AluJb SINE Alu 1 135 -177 779 259 30 22 chr10 17118577 17118847 -128470441 + HAL1b LINE L1 663 934 -414 * 785 183 46 11 chr10 17118846 17119021 -128470267 - L1M4 LINE L1 -833 5313 5133 1124 235 34 47 chr10 17119034 17119421 -128469867 + L1ME1 LINE L1 5724 6105 -61 378 286 25 12 chr10 17119328 17119489 -128469799 + L1MA10 LINE L1 6169 6331 -3 * 2154 118 16 3 chr10 17119537 17119842 -128469446 - AluSq SINE Alu -4 309 1 765 148 17 0 chr10 17120194 17120309 -128468979 - AluSq/x SINE Alu -183 130 14 484 90 0 0 chr10 17120321 17120388 -128468900 - AluJo SINE Alu -5 307 241 898 183 17 51 chr10 17120389 17120564 -128468724 - AluJo SINE Alu -142 170 2 238 212 48 7 chr10 17120580 17120726 -128468562 + (TATATG)n Simple_repeat Simple_repeat 4 155 0 201 94 0 0 chr10 17121551 17121583 -128467705 + (GA)n Simple_repeat Simple_repeat 2 33 0 372 277 13 3 chr10 17121702 17122010 -128467278 + GA-rich Low_complexity Low_complexity 1 311 0 827 223 135 61 chr10 17122587 17122692 -128466596 + L1ME1 LINE L1 5146 5242 -924 1860 141 0 78 chr10 17122692 17123025 -128466263 - AluSx SINE Alu -5 307 1 827 223 135 61 chr10 17123025 17123366 -128465922 + L1ME1 LINE L1 5242 5617 -549 1836 184 15 26 chr10 17123374 17123530 -128465758 + MER1B DNA MER1_type 1 157 -2555 1882 114 0 18 chr10 17123530 17123802 -128465486 - AluSq SINE Alu 0 313 47 1836 184 15 26 chr10 17123802 17123988 -128465300 + MER1B DNA MER1_type 157 339 0 1636 241 71 31 chr10 17123988 17124511 -128464777 + L1ME1 LINE L1 5619 6162 -4 2055 123 27 0 chr10 17125417 17125718 -128463570 - AluSg SINE Alu -1 309 1 575 286 91 20 chr10 17125991 17126190 -128463098 - MIR SINE MIR -21 241 29 2135 115 31 0 chr10 17126330 17126651 -128462637 + L1MA2 LINE L1 5963 6293 -11 1152 102 0 0 chr10 17126893 17127050 -128462238 + AluSg/x SINE Alu 152 308 -2 362 275 132 25 chr10 17127118 17127502 -128461786 + L1MC4a LINE L1 5591 6012 -109 1601 175 14 27 chr10 17127624 17127916 -128461372 + AluJb SINE Alu 1 288 -24 2055 125 4 0 chr10 17127943 17128245 -128461043 + AluSx SINE Alu 1 303 0 1012 146 6 6 chr10 17128328 17128486 -128460802 - L1PB3 LINE L1 -1 6153 5996 304 255 71 21 chr10 17128501 17128642 -128460646 + L1ME4a LINE L1 5969 6116 -5 555 280 77 6 chr10 17128889 17129057 -128460231 - MLT1L LTR MaLR -5 610 431 227 380 92 30 chr10 17129233 17129601 -128459687 - L2 LINE L2 -629 2685 2295 1138 101 0 6 chr10 17129601 17129760 -128459528 + AluSg/x SINE Alu 154 311 -1 197 396 22 36 chr10 17130329 17130468 -128458820 + MIR3 SINE MIR 5 141 -67 922 248 102 8 chr10 17130643 17130897 -128458391 - MLT1L LTR MaLR 0 615 338 233 281 73 12 chr10 17130910 17130992 -128458296 + MIR SINE MIR 176 262 0 1417 184 21 115 chr10 17131037 17131069 -128458219 - MLT1B LTR MaLR 0 390 357 2379 115 81 0 chr10 17131069 17131416 -128457872 + THE1C LTR MaLR 1 375 0 1417 184 21 115 chr10 17131416 17131808 -128457480 - MLT1B LTR MaLR -33 357 6 268 247 12 0 chr10 17134936 17135017 -128454271 + L1MC4 LINE L1 6622 6703 -1339 892 185 0 0 chr10 17135044 17135201 -128454087 + AluJb SINE Alu 152 308 -4 370 301 23 74 chr10 17135287 17135463 -128453825 + MIR3 SINE MIR 39 205 -3 258 241 46 11 chr10 17136239 17136326 -128452962 + L2 LINE L2 2667 2756 -558 400 267 17 33 chr10 17136342 17136462 -128452826 + L2 LINE L2 3195 3312 -1 401 304 118 72 chr10 17136487 17136852 -128452436 + L2 LINE L2 2851 3240 -73 2840 97 68 0 chr10 17136852 17137263 -128452025 + L1PA13 LINE L1 5725 6163 0 401 304 118 72 chr10 17137263 17137328 -128451960 + L2 LINE L2 3240 3301 -12 2116 115 0 3 chr10 17137345 17137631 -128451657 + AluSg SINE Alu 1 285 -25 405 0 0 0 chr10 17137632 17137677 -128451611 + (TG)n Simple_repeat Simple_repeat 2 46 0 1830 167 0 0 chr10 17138323 17138622 -128450666 - AluSx SINE Alu -13 299 1 608 248 25 71 chr10 17138883 17139165 -128450123 - MLT1C LTR MaLR 0 467 199 1318 111 6 0 chr10 17139408 17139588 -128449700 + AluSp SINE Alu 125 305 -8 2205 123 3 0 chr10 17140147 17140448 -128448840 + AluSx SINE Alu 1 302 -10 255 137 98 0 chr10 17140505 17140556 -128448732 + L2 LINE L2 3217 3272 0 1699 154 32 4 chr10 17141023 17141302 -128447986 - AluJo SINE Alu -25 287 1 2601 43 0 3 chr10 17141641 17141946 -128447342 - AluY SINE Alu -7 304 1 350 283 83 14 chr10 17142053 17142198 -128447090 + MIR SINE MIR 100 254 -8 693 248 78 59 chr10 17142393 17142839 -128446449 + MLT1E LTR MaLR 2 537 -30 250 245 21 64 chr10 17142936 17143030 -128446258 + MIR SINE MIR 118 207 -55 2173 118 30 3 chr10 17143114 17143418 -128445870 - AluSx SINE Alu 0 312 1 398 304 63 47 chr10 17143427 17143789 -128445499 + L1ME2 LINE L1 5585 5952 -212 248 219 86 29 chr10 17144129 17144234 -128445054 + L1ME LINE L1 5643 5753 -368 1223 185 163 135 chr10 17144417 17144525 -128444763 + LTR1B LTR ERV1 82 186 -640 369 0 0 0 chr10 17144525 17144566 -128444722 + (CA)n Simple_repeat Simple_repeat 2 42 0 1223 185 163 135 chr10 17144566 17145182 -128444106 + LTR1B LTR ERV1 186 826 0 355 265 110 68 chr10 17145416 17145635 -128443653 + MLT1L LTR MaLR 214 441 -174 26 0 0 0 chr10 17146244 17146270 -128443018 + AT_rich Low_complexity Low_complexity 1 26 0 210 37 0 0 chr10 17146625 17146652 -128442636 + (TG)n Simple_repeat Simple_repeat 2 28 0 758 289 24 0 chr10 17146744 17146952 -128442336 + MIR SINE MIR 46 258 -4 3772 167 106 13 chr10 17148402 17149158 -128440130 + LTR1B LTR ERV1 1 826 0 352 244 98 12 chr10 17149603 17149767 -128439521 + AluJb SINE Alu 105 282 -20 457 279 111 44 chr10 17149867 17150301 -128438987 - L2 LINE L2 -1022 2292 1830 31 0 0 0 chr10 17151393 17151424 -128437864 + AT_rich Low_complexity Low_complexity 1 31 0 2256 93 0 35 chr10 17151630 17151940 -128437348 - AluSq SINE Alu -14 299 1 2292 103 0 0 chr10 17152570 17152862 -128436426 + AluSc SINE Alu 1 292 -17 855 201 5 0 chr10 17154170 17154558 -128434730 + CT-rich Low_complexity Low_complexity 1 390 0 2118 141 0 0 chr10 17155471 17155762 -128433526 + AluSx SINE Alu 6 296 -16 237 287 50 0 chr10 17156260 17156361 -128432927 + MIR SINE MIR 38 143 -119 25 31 0 0 chr10 17156625 17156657 -128432631 + AT_rich Low_complexity Low_complexity 1 32 0 202 338 38 45 chr10 17156922 17157055 -128432233 - L2 LINE L2 -604 2710 2579 216 344 33 17 chr10 17157201 17157381 -128431907 - L2 LINE L2 -899 2415 2233 541 154 0 0 chr10 17157506 17157584 -128431704 - AluJ/FLAM SINE Alu -233 79 2 2995 151 0 8 chr10 17158340 17158824 -128430464 - L1PA15 LINE L1 -3 6162 5683 346 294 108 5 chr10 17158931 17159125 -128430163 - MIR SINE MIR -1 261 48 1618 83 208 0 chr10 17159290 17159531 -128429757 - AluSg1 SINE Alu -18 291 1 2676 140 4 42 chr10 17159533 17159984 -128429304 + Tigger2a DNA MER2_type 1 434 0 2393 104 0 0 chr10 17160482 17160790 -128428498 - AluSc SINE Alu -1 308 1 1669 184 3 10 chr10 17160824 17161123 -128428165 - AluJb SINE Alu -5 307 11 520 258 65 70 chr10 17161133 17161850 -128427438 - L1MEd LINE L1 -4325 2216 1229 4233 176 70 4 chr10 17162007 17162780 -128426508 + LTR1B LTR ERV1 1 824 -2 9375 91 5 2 chr10 17163637 17165713 -128423575 + L1PA7 LINE L1 4073 6152 -2 292 318 27 27 chr10 17167978 17168126 -128421162 + MIR SINE MIR 45 192 -70 533 226 24 8 chr10 17168204 17168328 -128420960 - L2 LINE L2 -1 3312 3187 261 182 31 75 chr10 17168467 17168701 -128420587 + (TTATA)n Simple_repeat Simple_repeat 1 223 0 238 250 48 12 chr10 17168631 17168799 -128420489 + (TA)n Simple_repeat Simple_repeat 2 175 0 * 276 350 102 0 chr10 17170437 17170623 -128418665 - MIR SINE MIR -54 208 4 186 43 0 0 chr10 17170813 17170836 -128418452 + (T)n Simple_repeat Simple_repeat 1 23 0 5712 51 0 0 chr10 17170904 17171592 -128417696 + L1PA5 LINE L1 5467 6154 0 1032 81 0 22 chr10 17172857 17172993 -128416295 - AluSq/x SINE Alu -180 133 1 493 59 0 2 chr10 17173235 17173298 -128415990 + L1PA5 LINE L1 6056 6135 -28 2148 135 0 3 chr10 17173996 17174299 -128414989 + AluSx SINE Alu 1 302 -10 182 329 155 12 chr10 17174511 17174672 -128414616 + MIR SINE MIR 76 259 -3 796 143 30 30 chr10 17174685 17174818 -128414470 - FLAM_C SINE Alu 0 133 1 21 36 0 0 chr10 17175007 17175035 -128414253 + AT_rich Low_complexity Low_complexity 1 28 0 220 292 65 38 chr10 17175038 17175202 -128414086 - MIR SINE MIR -61 201 34 2235 108 0 3 chr10 17176344 17176640 -128412648 + AluSc SINE Alu 1 295 -14 1727 214 55 9 chr10 17177342 17177781 -128411507 + MLT1C LTR MaLR 6 464 -3 276 326 21 57 chr10 17179915 17180056 -128409232 + MIR SINE MIR 48 183 -79 4936 95 1 36 chr10 17180066 17180779 -128408509 - LTR12 LTR ERV1 0 688 1 329 348 59 24 chr10 17183522 17183861 -128405427 + L2 LINE L2 2185 2535 -779 1943 134 39 0 chr10 17183865 17184148 -128405140 - AluSg SINE Alu -16 294 1 797 205 62 22 chr10 17184431 17184655 -128404633 - MER106A DNA MER1_type -1 235 3 296 359 16 47 chr10 17184683 17184875 -128404413 + L2 LINE L2 2914 3099 -173 2170 132 35 51 chr10 17184966 17185361 -128403927 + MLT1B LTR MaLR 1 389 -1 1593 196 18 0 chr10 17187070 17187351 -128401937 + AluJb SINE Alu 7 292 -20 298 0 48 0 chr10 17187422 17187464 -128401824 + (TG)n Simple_repeat Simple_repeat 2 45 0 257 0 30 0 chr10 17187526 17187559 -128401729 + (TG)n Simple_repeat Simple_repeat 2 35 0 333 0 0 0 chr10 17187620 17187657 -128401631 + (TG)n Simple_repeat Simple_repeat 1 37 0 545 305 47 60 chr10 17187739 17188119 -128401169 + L2 LINE L2 2898 3272 0 562 262 12 24 chr10 17188799 17188967 -128400321 + MER5B DNA MER1_type 8 173 -5 423 193 23 0 chr10 17189192 17189280 -128400008 + MER5A DNA MER1_type 4 93 -96 1652 201 7 0 chr10 17189551 17189859 -128399429 + AluJo SINE Alu 1 310 0 5531 70 113 0 chr10 17190380 17191122 -128398166 - LTR12 LTR ERV1 0 826 1 4733 93 1 15 chr10 17191122 17191775 -128397513 - HERV9 LTR ERV1 0 8399 7756 2092 176 92 78 chr10 17191769 17192694 -128396594 - Harlequin LTR ERV1 -5176 1720 842 * 35816 88 30 5 chr10 17192689 17197467 -128391821 - Harlequin LTR ERV1 -3445 4954 58 4694 68 224 0 chr10 17197491 17198166 -128391122 - LTR12 LTR ERV1 0 826 1 866 180 87 0 chr10 17198166 17198338 -128390950 - MER5A DNA MER1_type -2 187 1 900 92 0 0 chr10 17199555 17199675 -128389613 - L1MA2 LINE L1 0 6304 6185 480 300 78 40 chr10 17200052 17200399 -128388889 - L1ME LINE L1 -460 5661 5302 295 143 0 0 chr10 17202053 17202095 -128387193 + LTR7 LTR ERV1 1 42 -408 1899 151 6 22 chr10 17203684 17203996 -128385292 - AluJb SINE Alu -5 307 1 484 370 19 0 chr10 17204552 17204760 -128384528 + MIR SINE MIR 33 244 -18 2089 118 10 7 chr10 17205541 17205845 -128383443 + AluSx SINE Alu 1 305 -7 288 286 166 29 chr10 17206375 17206683 -128382605 + L1ME4a LINE L1 5661 6010 -111 22 30 0 61 chr10 17207048 17207096 -128382192 + AT_rich Low_complexity Low_complexity 1 46 -16 632 103 10 0 chr10 17207096 17207193 -128382095 + L1MA2 LINE L1 6207 6304 0 22 30 0 61 chr10 17207193 17207210 -128382078 + AT_rich Low_complexity Low_complexity 46 62 0 360 0 0 0 chr10 17207417 17207457 -128381831 + (TTA)n Simple_repeat Simple_repeat 3 42 0 2122 132 0 0 chr10 17207633 17207944 -128381344 + AluSx SINE Alu 2 312 0 2582 117 10 18 chr10 17209168 17209554 -128379734 + MER1A DNA MER1_type 147 529 0 364 266 166 0 chr10 17209606 17209745 -128379543 - MIR SINE MIR -4 258 97 2113 117 0 0 chr10 17209830 17210135 -128379153 + AluSx SINE Alu 1 305 0 581 228 169 22 chr10 17210516 17210700 -128378588 - MIR SINE MIR 0 262 52 411 246 140 3 chr10 17211483 17211611 -128377677 - MIR SINE MIR -62 146 12 220 287 180 43 chr10 17212075 17212448 -128376840 + L2 LINE L2 2465 2888 -426 315 243 88 88 chr10 17213734 17213870 -128375418 - MER5B DNA MER1_type -36 153 4 401 267 168 89 chr10 17214174 17214792 -128374496 + L1M2 LINE L1 527 1193 -5656 234 116 0 0 chr10 17215129 17215172 -128374116 + (G)n Simple_repeat Simple_repeat 1 43 0 14524 150 72 8 chr10 17215184 17220721 -128368567 - L1P5 LINE L1 -360 6507 625 1134 172 0 5 chr10 17220713 17220911 -128368377 - L1P5 LINE L1 -6663 200 4 * 845 230 36 0 chr10 17220936 17221132 -128368156 + MER63 DNA MER1_type 516 718 -343 236 294 0 43 chr10 17221159 17221251 -128368037 + L2 LINE L2 3190 3277 -36 217 319 118 7 chr10 17221625 17221769 -128367519 + L2 LINE L2 3003 3162 -151 346 240 103 55 chr10 17221785 17221931 -128367357 + L2 LINE L2 3113 3265 -48 331 266 106 0 chr10 17221952 17222046 -128367242 - L2 LINE L2 -19 3294 3191 2750 118 25 35 chr10 17222374 17222763 -128366525 + MSTA LTR MaLR 1 387 -41 1698 174 3 23 chr10 17222763 17223067 -128366221 - AluSg SINE Alu -12 298 1 2750 118 25 35 chr10 17223067 17223109 -128366179 + MSTA LTR MaLR 387 428 0 898 75 42 0 chr10 17223119 17223239 -128366049 - MER75 DNA T2_type 0 514 390 780 134 89 0 chr10 17223247 17223359 -128365929 + AluSq/x SINE Alu 5 126 -187 2313 92 0 3 chr10 17223362 17223657 -128365631 + AluSc SINE Alu 3 296 -13 2693 130 8 0 chr10 17223659 17224044 -128365244 - MER75 DNA T2_type -126 388 1 260 300 86 7 chr10 17224088 17224228 -128365060 + HAL1b LINE L1 506 656 -692 949 126 0 0 chr10 17224276 17224411 -128364877 + AluJb SINE Alu 1 135 -177 779 259 30 22 chr10 17224412 17224682 -128364606 + HAL1b LINE L1 663 934 -414 * 785 183 46 11 chr10 17224681 17224856 -128364432 - L1M4 LINE L1 -833 5313 5133 1124 235 34 47 chr10 17224869 17225256 -128364032 + L1ME1 LINE L1 5724 6105 -61 378 286 25 12 chr10 17225163 17225324 -128363964 + L1MA10 LINE L1 6169 6331 -3 * 2154 118 16 3 chr10 17225372 17225677 -128363611 - AluSq SINE Alu -4 309 1 802 150 17 0 chr10 17226028 17226148 -128363140 - AluSq/x SINE Alu -183 130 9 502 73 0 0 chr10 17226156 17226224 -128363064 - AluJo SINE Alu -4 308 241 898 183 17 51 chr10 17226225 17226400 -128362888 - AluJo SINE Alu -142 170 2 238 212 48 7 chr10 17226416 17226562 -128362726 + (TATATG)n Simple_repeat Simple_repeat 4 155 0 201 94 0 0 chr10 17227387 17227419 -128361869 + (GA)n Simple_repeat Simple_repeat 2 33 0 394 279 13 3 chr10 17227538 17227846 -128361442 + GA-rich Low_complexity Low_complexity 1 311 0 827 230 138 42 chr10 17228423 17228519 -128360769 + L1ME1 LINE L1 5146 5231 -935 1877 142 0 77 chr10 17228519 17228857 -128360431 - AluSx SINE Alu 0 312 1 827 230 138 42 chr10 17228857 17229198 -128360090 + L1ME1 LINE L1 5231 5617 -549 1836 184 15 26 chr10 17229206 17229362 -128359926 + MER1B DNA MER1_type 1 157 -2555 1882 114 0 18 chr10 17229362 17229634 -128359654 - AluSq SINE Alu 0 313 47 1836 184 15 26 chr10 17229634 17229820 -128359468 + MER1B DNA MER1_type 157 339 0 1636 241 71 31 chr10 17229820 17230343 -128358945 + L1ME1 LINE L1 5619 6162 -4 2055 123 27 0 chr10 17231249 17231550 -128357738 - AluSg SINE Alu -1 309 1 575 286 91 20 chr10 17231823 17232022 -128357266 - MIR SINE MIR -21 241 29 2135 115 31 0 chr10 17232162 17232483 -128356805 + L1MA2 LINE L1 5963 6293 -11 1152 102 0 0 chr10 17232725 17232882 -128356406 + AluSg/x SINE Alu 154 310 -2 362 275 132 25 chr10 17232950 17233334 -128355954 + L1MC4a LINE L1 5591 6012 -109 1601 175 14 27 chr10 17233456 17233748 -128355540 + AluJb SINE Alu 1 288 -24 2055 125 4 0 chr10 17233775 17234077 -128355211 + AluSx SINE Alu 1 303 0 1012 146 6 6 chr10 17234160 17234318 -128354970 - L1PB3 LINE L1 -1 6153 5996 304 255 71 21 chr10 17234333 17234474 -128354814 + L1ME4a LINE L1 5969 6116 -5 555 280 77 6 chr10 17234721 17234889 -128354399 - MLT1L LTR MaLR -5 610 431 227 380 92 30 chr10 17235065 17235433 -128353855 - L2 LINE L2 -629 2685 2295 1138 101 0 6 chr10 17235433 17235592 -128353696 + AluSg/x SINE Alu 154 311 -1 197 396 22 36 chr10 17236161 17236300 -128352988 + MIR3 SINE MIR 5 141 -67 922 248 102 8 chr10 17236475 17236729 -128352559 - MLT1L LTR MaLR 0 615 338 233 281 73 12 chr10 17236742 17236824 -128352464 + MIR SINE MIR 176 262 0 1417 184 21 115 chr10 17236869 17236901 -128352387 - MLT1B LTR MaLR 0 390 357 2379 115 81 0 chr10 17236901 17237248 -128352040 + THE1C LTR MaLR 1 375 0 1417 184 21 115 chr10 17237248 17237640 -128351648 - MLT1B LTR MaLR -33 357 6 268 247 12 0 chr10 17240768 17240849 -128348439 + L1MC4 LINE L1 6622 6703 -1339 892 185 0 0 chr10 17240876 17241033 -128348255 + AluJb SINE Alu 152 308 -4 370 301 23 74 chr10 17241119 17241295 -128347993 + MIR3 SINE MIR 39 205 -3 258 241 46 11 chr10 17242071 17242158 -128347130 + L2 LINE L2 2667 2756 -558 400 267 17 33 chr10 17242174 17242294 -128346994 + L2 LINE L2 3195 3312 -1 401 304 118 72 chr10 17242319 17242684 -128346604 + L2 LINE L2 2851 3240 -73 2840 97 68 0 chr10 17242684 17243095 -128346193 + L1PA13 LINE L1 5725 6163 0 401 304 118 72 chr10 17243095 17243160 -128346128 + L2 LINE L2 3240 3301 -12 2116 115 0 3 chr10 17243177 17243463 -128345825 + AluSg SINE Alu 1 285 -25 405 0 0 0 chr10 17243464 17243509 -128345779 + (TG)n Simple_repeat Simple_repeat 2 46 0 1830 167 0 0 chr10 17244155 17244454 -128344834 - AluSx SINE Alu -13 299 1 1360 232 71 40 chr10 17244715 17245168 -128344120 - MLT1C LTR MaLR 0 467 1 868 149 0 0 chr10 17245277 17245418 -128343870 - AluJo SINE Alu 0 312 172 978 135 5 125 chr10 17245629 17245703 -128343585 - AluJo SINE Alu -136 176 95 2054 133 0 13 chr10 17245703 17246011 -128343277 + AluSx SINE Alu 9 312 0 978 135 5 125 chr10 17246011 17246136 -128343152 - AluJo SINE Alu -217 95 1 248 270 0 16 chr10 17247050 17247113 -128342175 + CT-rich Low_complexity Low_complexity 4 65 0 1452 189 40 17 chr10 17247114 17247415 -128341873 - AluJb SINE Alu -4 308 1 320 294 48 24 chr10 17247925 17248051 -128341237 + MIR SINE MIR 20 148 -114 363 263 0 12 chr10 17248856 17248936 -128340352 - L2 LINE L2 -8 3305 3227 798 212 13 93 chr10 17248937 17249054 -128340234 - MER58A DNA MER1_type -2202 218 128 1884 173 0 19 chr10 17249054 17249190 -128340098 + AluSx SINE Alu 1 138 -174 2512 53 30 0 chr10 17249190 17249492 -128339796 + AluY SINE Alu 1 311 0 1884 173 0 19 chr10 17249492 17249673 -128339615 + AluSx SINE Alu 138 312 0 798 212 13 93 chr10 17249673 17249791 -128339497 - MER58A DNA MER1_type -2292 128 2 343 340 75 11 chr10 17249817 17250005 -128339283 - L2 LINE L2 -203 3110 2911 447 325 81 27 chr10 17250021 17250319 -128338969 - L2 LINE L2 -517 2797 2484 2240 88 3 14 chr10 17251157 17251454 -128337834 + AluSx SINE Alu 1 294 -18 573 284 104 67 chr10 17251668 17251944 -128337344 - L1ME4a LINE L1 -4 6117 5853 2007 125 3 7 chr10 17251944 17252239 -128337049 - AluSx SINE Alu -18 294 1 573 284 104 67 chr10 17252239 17252546 -128336742 - L1ME4a LINE L1 -268 5853 5512 926 131 42 48 chr10 17255439 17255607 -128333681 - AluJo SINE Alu -14 298 132 22 35 0 0 chr10 17255607 17255636 -128333652 + AT_rich Low_complexity Low_complexity 1 29 0 351 57 51 68 chr10 17255640 17255817 -128333471 + (TA)n Simple_repeat Simple_repeat 1 174 0 2104 128 7 0 chr10 17255817 17256106 -128333182 - AluSx SINE Alu -17 295 5 704 167 25 0 chr10 17256120 17256240 -128333048 - AluJo SINE Alu -188 124 2 1840 124 0 8 chr10 17256749 17257008 -128332280 + AluSc SINE Alu 36 292 -17 460 226 165 0 chr10 17257207 17257322 -128331966 + MLT1K LTR MaLR 25 158 -347 1871 143 29 0 chr10 17257762 17258042 -128331246 - AluSx SINE Alu -24 288 1 304 226 16 158 chr10 17258440 17258573 -128330715 + MIR SINE MIR 34 147 -69 1699 212 118 15 chr10 17259093 17259284 -128330004 + MLT1D LTR MaLR 1 171 -334 1539 176 3 54 chr10 17259284 17259597 -128329691 + AluJo SINE Alu 1 297 -15 1699 212 118 15 chr10 17259597 17259863 -128329425 + MLT1D LTR MaLR 171 505 0 341 330 11 0 chr10 17260191 17260282 -128329006 - MER74A LTR ERVL -63 495 404 1734 147 19 42 chr10 17261582 17261889 -128327399 - AluJo SINE Alu -12 300 1 288 247 24 0 chr10 17263354 17263439 -128325849 - MIR SINE MIR -59 203 117 204 271 35 35 chr10 17265642 17265727 -128323561 - MIR SINE MIR -77 185 101 550 288 88 50 chr10 17265791 17266110 -128323178 + MLT1K LTR MaLR 152 482 -106 275 292 88 0 chr10 17266293 17266406 -128322882 + L2 LINE L2 3118 3240 -73 1081 126 31 2 chr10 17266831 17267060 -128322228 - AluJb SINE Alu -14 298 21 23 33 0 0 chr10 17267310 17267340 -128321948 + AT_rich Low_complexity Low_complexity 1 30 0 570 221 71 0 chr10 17267343 17267456 -128321832 - FLAM_A SINE Alu -12 121 1 2393 120 92 2 chr10 17268011 17268404 -128320884 + MSTA LTR MaLR 1 428 0 1358 164 125 8 chr10 17268902 17269158 -128320130 - AluSg1 SINE Alu -23 286 1 736 178 0 30 chr10 17269253 17269388 -128319900 + FLAM_C SINE Alu 1 131 -2 1462 178 27 51 chr10 17269882 17270175 -128319113 - AluJo SINE Alu -26 286 1 865 161 44 0 chr10 17270948 17271128 -128318160 - MER33 DNA MER1_type -1 323 136 446 239 9 15 chr10 17271180 17271315 -128317973 - MER33 DNA MER1_type -251 73 1 2192 149 2 11 chr10 17271433 17271877 -128317411 + MER1A DNA MER1_type 4 529 0 415 213 104 67 chr10 17272965 17273129 -128316159 + MIR SINE MIR 79 248 -14 1785 163 66 37 chr10 17275288 17275685 -128313603 + L1MA2 LINE L1 5897 6304 0 21976 105 22 6 chr10 17275886 17280031 -128309257 + L1PA8 LINE L1 1960 6169 -3 293 301 7 27 chr10 17281154 17281300 -128307988 + MIR SINE MIR 79 221 -41 2425 64 0 0 chr10 17281605 17281886 -128307402 + AluY SINE Alu 15 295 -16 737 190 103 77 chr10 17282142 17282337 -128306951 + MER20 DNA MER1_type 20 219 0 2809 90 0 6 chr10 17282528 17282894 -128306394 - THE1B LTR MaLR 0 364 1 827 123 0 0 chr10 17283026 17283148 -128306140 + L1MA1 LINE L1 6181 6302 0 4762 135 29 8 chr10 17284053 17284836 -128304452 - L1PA16 LINE L1 0 6166 5367 294 233 123 0 chr10 17286640 17286713 -128302575 - MER94 DNA DNA -52 82 1 1766 175 3 22 chr10 17287064 17287378 -128301910 - AluJb SINE Alu -4 308 1 503 170 226 0 chr10 17287384 17287490 -128301798 - FLAM_C SINE Alu -10 133 4 393 280 54 42 chr10 17287591 17287759 -128301529 + MIR SINE MIR 3 172 -90 1459 297 91 10 chr10 17287779 17288462 -128300826 + MER20B DNA MER1_type 42 779 -4 2229 105 6 16 chr10 17288499 17288813 -128300475 + AluSq SINE Alu 1 311 -2 543 203 152 6 chr10 17290154 17290312 -128298976 - MER5A DNA MER1_type -5 184 4 863 130 7 22 chr10 17291097 17291235 -128298053 - FLAM_C SINE Alu -7 136 1 1624 172 26 30 chr10 17293684 17293987 -128295301 + AluJb SINE Alu 1 302 -10 887 211 22 0 chr10 17294050 17294235 -128295053 - MER20 DNA MER1_type -1 218 30 411 298 35 7 chr10 17294634 17294775 -128294513 + L3 LINE CR1 1425 1569 -8 272 269 87 0 chr10 17295729 17295833 -128293455 - MIR3 SINE MIR -7 201 89 757 222 148 14 chr10 17295995 17296211 -128293077 + L1ME LINE L1 5559 5803 -361 2521 296 120 17 chr10 17296319 17297731 -128291557 + L2 LINE L2 1277 2834 -480 367 267 337 0 chr10 17297760 17298048 -128291240 + L2 LINE L2 2929 3313 0 264 293 12 0 chr10 17299200 17299282 -128290006 - MER103 DNA DNA -1 165 83 260 218 0 36 chr10 17301143 17301198 -128288090 + polypurine Low_complexity Low_complexity 4 56 0 328 315 210 6 chr10 17301370 17301713 -128287575 + L2 LINE L2 2562 2974 -340 1058 101 13 0 chr10 17302055 17302204 -128287084 + L1PA10 LINE L1 6018 6168 0 1529 117 0 14 chr10 17302322 17302544 -128286744 + AluSg/x SINE Alu 84 302 -8 24 0 0 0 chr10 17304475 17304499 -128284789 + AT_rich Low_complexity Low_complexity 1 24 0 412 215 6 153 chr10 17304657 17304820 -128284468 + MIR SINE MIR 66 204 -58 1572 139 9 104 chr10 17304865 17305181 -128284107 - MER2 DNA MER2_type -58 287 2 449 346 21 30 chr10 17305440 17305674 -128283614 - MIR SINE MIR -22 240 9 2216 101 7 0 chr10 17306555 17306852 -128282436 + AluSx SINE Alu 1 299 -13 253 273 23 0 chr10 17306900 17306988 -128282300 + L1MC4 LINE L1 6614 6703 -1339 323 311 0 0 chr10 17306996 17307086 -128282202 + L1MC4 LINE L1 6614 6703 -1339 276 30 0 0 chr10 17307090 17307123 -128282165 + (CA)n Simple_repeat Simple_repeat 2 34 0 418 132 22 15 chr10 17307792 17307881 -128281407 + L1P1 LINE L1 5374 5466 -689 1935 175 28 50 chr10 17307895 17308009 -128281279 + L1MB8 LINE L1 5419 5534 -644 2083 113 17 3 chr10 17308009 17308300 -128280988 - AluSc SINE Alu -14 295 1 1935 175 28 50 chr10 17308300 17308607 -128280681 + L1MB8 LINE L1 5534 5831 -347 1347 165 26 11 chr10 17308608 17308881 -128280407 + L1MB8 LINE L1 5902 6178 0 1651 173 0 53 chr10 17308970 17309293 -128279995 - AluJo SINE Alu -5 307 2 342 0 0 0 chr10 17309805 17309843 -128279445 + (TAAA)n Simple_repeat Simple_repeat 1 38 0 2396 82 0 7 chr10 17311605 17311909 -128277379 - AluY SINE Alu -9 302 1 180 0 0 0 chr10 17313421 17313441 -128275847 + (A)n Simple_repeat Simple_repeat 1 20 0 474 186 132 23 chr10 17313493 17313580 -128275708 + L1ME2 LINE L1 6022 6129 -35 183 42 0 0 chr10 17313580 17313604 -128275684 + (CA)n Simple_repeat Simple_repeat 2 25 0 474 186 132 23 chr10 17313604 17313645 -128275643 + L1ME2 LINE L1 6129 6164 0 1810 162 17 3 chr10 17313711 17314007 -128275281 - AluJb SINE Alu -12 300 1 266 290 90 10 chr10 17314269 17314369 -128274919 - MIR SINE MIR -102 160 53 2095 133 0 0 chr10 17315029 17315323 -128273965 - AluSq SINE Alu -11 302 9 2368 66 0 40 chr10 17315416 17315718 -128273570 + AluY SINE Alu 1 290 -21 1947 235 24 49 chr10 17315720 17316315 -128272973 + L1ME1 LINE L1 5597 6334 0 326 292 11 0 chr10 17316323 17316412 -128272876 - MIR SINE MIR -160 102 13 22 0 0 0 chr10 17317799 17317821 -128271467 + AT_rich Low_complexity Low_complexity 1 22 0 341 260 305 24 chr10 17317880 17318126 -128271162 - L2 LINE L2 -10 3303 2989 2090 112 0 3 chr10 17318171 17318457 -128270831 + AluSx SINE Alu 23 307 -5 1140 139 35 0 chr10 17318457 17318630 -128270658 + AluSg/x SINE Alu 134 312 0 267 261 54 9 chr10 17319237 17319348 -128269940 + L1MC3 LINE L1 6708 6823 -962 1173 167 50 14 chr10 17319559 17319571 -128269717 - MER46A DNA MER2_type -2495 236 226 2685 113 3 45 chr10 17319571 17319951 -128269337 - THE1B LTR MaLR 0 364 1 1173 167 50 14 chr10 17319951 17320159 -128269129 - MER46A DNA MER2_type -2505 226 8 454 188 101 54 chr10 17320040 17320189 -128269099 + MER46A DNA MER2_type 11 166 -70 * 14524 150 72 8 chr10 17320542 17326079 -128263209 - L1P5 LINE L1 -360 6507 625 1134 172 0 5 chr10 17326071 17326269 -128263019 - L1P5 LINE L1 -6663 200 4 * 845 230 36 0 chr10 17326294 17326490 -128262798 + MER63 DNA MER1_type 515 717 -343 236 294 0 43 chr10 17326517 17326609 -128262679 + L2 LINE L2 3190 3277 -36 217 319 118 7 chr10 17326983 17327127 -128262161 + L2 LINE L2 3003 3162 -151 346 240 103 55 chr10 17327143 17327289 -128261999 + L2 LINE L2 3113 3265 -48 331 266 106 0 chr10 17327310 17327404 -128261884 - L2 LINE L2 -19 3294 3191 2750 118 25 35 chr10 17327732 17328121 -128261167 + MSTA LTR MaLR 1 387 -41 1698 174 3 23 chr10 17328121 17328425 -128260863 - AluSg SINE Alu -12 298 1 2750 118 25 35 chr10 17328425 17328467 -128260821 + MSTA LTR MaLR 387 428 0 898 75 42 0 chr10 17328477 17328597 -128260691 - MER75 DNA T2_type 0 504 380 780 134 89 0 chr10 17328605 17328717 -128260571 + AluSq/x SINE Alu 5 126 -187 2313 92 0 3 chr10 17328720 17329015 -128260273 + AluSc SINE Alu 3 296 -13 2693 130 8 0 chr10 17329017 17329402 -128259886 - MER75 DNA T2_type -126 388 1 260 300 86 7 chr10 17329446 17329586 -128259702 + HAL1b LINE L1 506 656 -692 949 126 0 0 chr10 17329634 17329769 -128259519 + AluJb SINE Alu 1 135 -177 779 259 30 22 chr10 17329770 17330040 -128259248 + HAL1b LINE L1 663 934 -414 * 785 183 46 11 chr10 17330039 17330214 -128259074 - L1M4 LINE L1 -833 5313 5133 1124 235 34 47 chr10 17330227 17330614 -128258674 + L1ME1 LINE L1 5724 6105 -61 378 286 25 12 chr10 17330521 17330682 -128258606 + L1MA10 LINE L1 6169 6331 -3 * 2154 118 16 3 chr10 17330730 17331035 -128258253 - AluSq SINE Alu -4 309 1 802 150 17 0 chr10 17331386 17331506 -128257782 - AluSq/x SINE Alu -183 130 9 502 73 0 0 chr10 17331514 17331582 -128257706 - AluJo SINE Alu -4 308 241 898 183 17 51 chr10 17331583 17331758 -128257530 - AluJo SINE Alu -142 170 2 238 212 48 7 chr10 17331774 17331920 -128257368 + (TATATG)n Simple_repeat Simple_repeat 4 155 0 201 94 0 0 chr10 17332745 17332777 -128256511 + (GA)n Simple_repeat Simple_repeat 2 33 0 372 277 13 3 chr10 17332896 17333204 -128256084 + GA-rich Low_complexity Low_complexity 1 311 0 827 230 138 42 chr10 17333781 17333877 -128255411 + L1ME1 LINE L1 5146 5231 -935 1877 142 0 77 chr10 17333877 17334215 -128255073 - AluSx SINE Alu 0 312 1 827 230 138 42 chr10 17334215 17334556 -128254732 + L1ME1 LINE L1 5231 5617 -549 1836 184 15 26 chr10 17334564 17334720 -128254568 + MER1B DNA MER1_type 1 157 -2555 1882 114 0 18 chr10 17334720 17334992 -128254296 - AluSq SINE Alu 0 313 47 1836 184 15 26 chr10 17334992 17335178 -128254110 + MER1B DNA MER1_type 157 339 0 1636 241 71 31 chr10 17335178 17335701 -128253587 + L1ME1 LINE L1 5619 6162 -4 2055 123 27 0 chr10 17336607 17336908 -128252380 - AluSg SINE Alu -1 309 1 575 286 91 20 chr10 17337181 17337380 -128251908 - MIR SINE MIR -21 241 29 2135 115 31 0 chr10 17337520 17337841 -128251447 + L1MA2 LINE L1 5963 6293 -11 1152 102 0 0 chr10 17338083 17338240 -128251048 + AluSg/x SINE Alu 154 310 -2 362 275 132 25 chr10 17338308 17338692 -128250596 + L1MC4a LINE L1 5591 6012 -109 1601 175 14 27 chr10 17338814 17339106 -128250182 + AluJb SINE Alu 1 288 -24 2055 125 4 0 chr10 17339133 17339435 -128249853 + AluSx SINE Alu 1 303 0 1012 146 6 6 chr10 17339518 17339676 -128249612 - L1PB3 LINE L1 -1 6153 5996 304 255 71 21 chr10 17339691 17339832 -128249456 + L1ME4a LINE L1 5969 6116 -5 555 280 77 6 chr10 17340079 17340247 -128249041 - MLT1L LTR MaLR -5 610 431 227 380 92 30 chr10 17340423 17340791 -128248497 - L2 LINE L2 -629 2685 2295 1138 101 0 6 chr10 17340791 17340950 -128248338 + AluSg/x SINE Alu 154 311 -1 197 396 22 36 chr10 17341519 17341658 -128247630 + MIR3 SINE MIR 5 141 -67 922 248 102 8 chr10 17341833 17342087 -128247201 - MLT1L LTR MaLR 0 615 338 233 281 73 12 chr10 17342100 17342182 -128247106 + MIR SINE MIR 176 262 0 1417 184 21 115 chr10 17342227 17342259 -128247029 - MLT1B LTR MaLR 0 390 357 2379 115 81 0 chr10 17342259 17342606 -128246682 + THE1C LTR MaLR 1 375 0 1417 184 21 115 chr10 17342606 17342998 -128246290 - MLT1B LTR MaLR -33 357 6 268 247 12 0 chr10 17346126 17346207 -128243081 + L1MC4 LINE L1 6622 6703 -1339 879 177 0 6 chr10 17346234 17346392 -128242896 + AluJb SINE Alu 152 308 -4 370 301 23 74 chr10 17346478 17346654 -128242634 + MIR3 SINE MIR 39 205 -3 258 241 46 11 chr10 17347430 17347517 -128241771 + L2 LINE L2 2667 2756 -558 400 267 17 33 chr10 17347533 17347653 -128241635 + L2 LINE L2 3195 3312 -1 401 304 118 72 chr10 17347678 17348043 -128241245 + L2 LINE L2 2851 3240 -73 2840 97 68 0 chr10 17348043 17348454 -128240834 + L1PA13 LINE L1 5725 6163 0 401 304 118 72 chr10 17348454 17348519 -128240769 + L2 LINE L2 3240 3301 -12 2116 115 0 3 chr10 17348536 17348822 -128240466 + AluSg SINE Alu 1 285 -25 405 0 0 0 chr10 17348823 17348868 -128240420 + (TG)n Simple_repeat Simple_repeat 2 46 0 1830 167 0 0 chr10 17349514 17349813 -128239475 - AluSx SINE Alu -13 299 1 1360 232 71 40 chr10 17350074 17350527 -128238761 - MLT1C LTR MaLR 0 467 1 868 149 0 0 chr10 17350636 17350777 -128238511 - AluJo SINE Alu 0 312 172 978 135 5 125 chr10 17350988 17351062 -128238226 - AluJo SINE Alu -136 176 95 2054 133 0 13 chr10 17351062 17351370 -128237918 + AluSx SINE Alu 9 312 0 978 135 5 125 chr10 17351370 17351495 -128237793 - AluJo SINE Alu -217 95 1 248 270 0 16 chr10 17352409 17352472 -128236816 + CT-rich Low_complexity Low_complexity 4 65 0 1452 189 40 17 chr10 17352473 17352774 -128236514 - AluJb SINE Alu -4 308 1 320 294 48 24 chr10 17353284 17353410 -128235878 + MIR SINE MIR 20 148 -114 363 263 0 12 chr10 17354215 17354295 -128234993 - L2 LINE L2 -8 3305 3227 798 212 13 93 chr10 17354296 17354413 -128234875 - MER58A DNA MER1_type -2202 218 128 1884 173 0 19 chr10 17354413 17354549 -128234739 + AluSx SINE Alu 1 138 -174 2512 53 30 0 chr10 17354549 17354851 -128234437 + AluY SINE Alu 1 311 0 1884 173 0 19 chr10 17354851 17355032 -128234256 + AluSx SINE Alu 138 312 0 798 212 13 93 chr10 17355032 17355150 -128234138 - MER58A DNA MER1_type -2292 128 2 343 340 75 11 chr10 17355176 17355364 -128233924 - L2 LINE L2 -203 3110 2911 447 325 81 27 chr10 17355380 17355678 -128233610 - L2 LINE L2 -517 2797 2484 2265 88 3 14 chr10 17356516 17356813 -128232475 + AluSx SINE Alu 1 294 -18 534 284 104 67 chr10 17357027 17357303 -128231985 - L1ME4a LINE L1 -4 6117 5853 2032 125 3 7 chr10 17357303 17357598 -128231690 - AluSx SINE Alu -18 294 1 534 284 104 67 chr10 17357598 17357905 -128231383 - L1ME4a LINE L1 -268 5853 5512 926 131 42 48 chr10 17360798 17360966 -128228322 - AluJo SINE Alu -14 298 132 22 35 0 0 chr10 17360966 17360995 -128228293 + AT_rich Low_complexity Low_complexity 1 29 0 351 57 51 68 chr10 17360999 17361176 -128228112 + (TA)n Simple_repeat Simple_repeat 1 174 0 2104 128 7 0 chr10 17361176 17361465 -128227823 - AluSx SINE Alu -17 295 5 704 167 25 0 chr10 17361479 17361599 -128227689 - AluJo SINE Alu -188 124 2 1840 124 0 8 chr10 17362108 17362367 -128226921 + AluSc SINE Alu 36 292 -17 460 226 165 0 chr10 17362566 17362681 -128226607 + MLT1K LTR MaLR 25 158 -347 1871 143 29 0 chr10 17363121 17363401 -128225887 - AluSx SINE Alu -24 288 1 304 226 16 158 chr10 17363799 17363932 -128225356 + MIR SINE MIR 34 147 -69 1699 212 118 15 chr10 17364452 17364643 -128224645 + MLT1D LTR MaLR 1 171 -334 1539 176 3 54 chr10 17364643 17364956 -128224332 + AluJo SINE Alu 1 297 -15 1699 212 118 15 chr10 17364956 17365222 -128224066 + MLT1D LTR MaLR 171 505 0 341 330 11 0 chr10 17365550 17365641 -128223647 - MER74A LTR ERVL -63 495 404 1734 147 19 42 chr10 17366941 17367248 -128222040 - AluJo SINE Alu -12 300 1 288 247 24 0 chr10 17368713 17368798 -128220490 - MIR SINE MIR -59 203 117 204 271 35 35 chr10 17371001 17371086 -128218202 - MIR SINE MIR -77 185 101 550 288 88 50 chr10 17371150 17371469 -128217819 + MLT1K LTR MaLR 152 482 -106 275 292 88 0 chr10 17371652 17371765 -128217523 + L2 LINE L2 3118 3240 -73 1081 126 31 2 chr10 17372190 17372419 -128216869 - AluJb SINE Alu -14 298 21 23 33 0 0 chr10 17372669 17372699 -128216589 + AT_rich Low_complexity Low_complexity 1 30 0 570 221 71 0 chr10 17372702 17372815 -128216473 - FLAM_A SINE Alu -12 121 1 2393 120 92 2 chr10 17373370 17373763 -128215525 + MSTA LTR MaLR 1 428 0 1358 164 125 8 chr10 17374261 17374517 -128214771 - AluSg1 SINE Alu -23 286 1 736 178 0 30 chr10 17374612 17374747 -128214541 + FLAM_C SINE Alu 1 131 -2 1462 178 27 51 chr10 17375241 17375534 -128213754 - AluJo SINE Alu -26 286 1 865 161 44 0 chr10 17376307 17376487 -128212801 - MER33 DNA MER1_type -1 362 175 446 239 9 15 chr10 17376539 17376674 -128212614 - MER33 DNA MER1_type -251 73 1 2192 149 2 11 chr10 17376792 17377236 -128212052 + MER1A DNA MER1_type 4 529 0 415 213 104 67 chr10 17378324 17378488 -128210800 + MIR SINE MIR 79 248 -14 1670 158 70 44 chr10 17380662 17381047 -128208241 + L1MA2 LINE L1 5910 6304 0 21976 105 22 6 chr10 17381248 17385393 -128203895 + L1PA8 LINE L1 1960 6169 -3 293 301 7 27 chr10 17386516 17386662 -128202626 + MIR SINE MIR 79 221 -41 2425 64 0 0 chr10 17386967 17387248 -128202040 + AluY SINE Alu 15 295 -16 737 190 103 77 chr10 17387504 17387699 -128201589 + MER20 DNA MER1_type 20 219 0 2809 90 0 6 chr10 17387890 17388256 -128201032 - THE1B LTR MaLR 0 364 1 827 123 0 0 chr10 17388388 17388510 -128200778 + L1MA1 LINE L1 6181 6302 0 4747 137 29 8 chr10 17389415 17390198 -128199090 - L1PA16 LINE L1 0 6166 5367 294 233 123 0 chr10 17392002 17392075 -128197213 - MER94 DNA DNA -52 82 1 1766 175 3 22 chr10 17392426 17392740 -128196548 - AluJb SINE Alu -4 308 1 503 170 226 0 chr10 17392746 17392852 -128196436 - FLAM_C SINE Alu -10 133 4 393 280 54 42 chr10 17392953 17393121 -128196167 + MIR SINE MIR 3 172 -90 1459 297 91 10 chr10 17393141 17393824 -128195464 + MER20B DNA MER1_type 42 779 -4 2229 105 6 16 chr10 17393861 17394175 -128195113 + AluSq SINE Alu 1 311 -2 543 203 152 6 chr10 17395516 17395674 -128193614 - MER5A DNA MER1_type -5 184 4 863 130 7 22 chr10 17396459 17396597 -128192691 - FLAM_C SINE Alu -7 136 1 1624 172 26 30 chr10 17399046 17399349 -128189939 + AluJb SINE Alu 1 302 -10 887 211 22 0 chr10 17399412 17399597 -128189691 - MER20 DNA MER1_type -1 218 30 411 298 35 7 chr10 17399995 17400136 -128189152 + L3 LINE CR1 1425 1569 -8 272 269 87 0 chr10 17401090 17401194 -128188094 - MIR3 SINE MIR -7 201 89 757 222 148 14 chr10 17401356 17401572 -128187716 + L1ME LINE L1 5559 5803 -361 2521 296 120 17 chr10 17401680 17403092 -128186196 + L2 LINE L2 1277 2834 -480 367 267 337 0 chr10 17403121 17403409 -128185879 + L2 LINE L2 2929 3313 0 264 293 12 0 chr10 17404560 17404642 -128184646 - MER103 DNA DNA -1 165 83 260 218 0 36 chr10 17406503 17406558 -128182730 + polypurine Low_complexity Low_complexity 4 56 0 425 315 210 6 chr10 17406730 17407073 -128182215 + L2 LINE L2 2562 2974 -340 1025 101 13 0 chr10 17407415 17407564 -128181724 + L1PA10 LINE L1 6018 6168 0 1527 117 0 14 chr10 17407682 17407904 -128181384 + AluSg/x SINE Alu 84 302 -8 24 0 0 0 chr10 17409835 17409859 -128179429 + AT_rich Low_complexity Low_complexity 1 24 0 420 215 6 153 chr10 17410017 17410180 -128179108 + MIR SINE MIR 66 204 -58 1427 139 9 104 chr10 17410225 17410541 -128178747 - MER2 DNA MER2_type -58 287 2 458 346 21 30 chr10 17410800 17411034 -128178254 - MIR SINE MIR -22 240 9 2208 101 7 0 chr10 17411915 17412212 -128177076 + AluSx SINE Alu 1 299 -13 321 247 47 0 chr10 17412260 17412345 -128176943 - L1MC4 LINE L1 -1339 6703 6615 * 341 300 0 0 chr10 17412300 17412390 -128176898 + L1MC4 LINE L1 6614 6703 -1339 305 333 0 0 chr10 17412356 17412446 -128176842 - L1MC4 LINE L1 -1339 6703 6614 * 276 30 0 0 chr10 17412450 17412483 -128176805 + (CA)n Simple_repeat Simple_repeat 2 34 0 382 123 18 14 chr10 17413145 17413227 -128176061 + L1MB8 LINE L1 5364 5448 -721 1738 174 29 50 chr10 17413257 17413369 -128175919 + L1MB8 LINE L1 5421 5534 -644 2089 113 17 3 chr10 17413369 17413660 -128175628 - AluSc SINE Alu -14 295 1 1738 174 29 50 chr10 17413660 17413967 -128175321 + L1MB8 LINE L1 5534 5831 -347 1215 165 26 11 chr10 17413968 17414241 -128175047 + L1MB8 LINE L1 5902 6178 0 1676 173 0 53 chr10 17414330 17414653 -128174635 - AluJo SINE Alu -5 307 2 342 0 0 0 chr10 17415165 17415203 -128174085 + (TAAA)n Simple_repeat Simple_repeat 1 38 0 180 244 0 0 chr10 17416789 17416830 -128172458 + MIR SINE MIR 222 262 0 2390 82 0 7 chr10 17416965 17417269 -128172019 - AluY SINE Alu -9 302 1 180 0 0 0 chr10 17418781 17418801 -128170487 + (A)n Simple_repeat Simple_repeat 1 20 0 411 186 132 23 chr10 17418853 17418940 -128170348 + L1ME2 LINE L1 6022 6129 -35 183 42 0 0 chr10 17418940 17418964 -128170324 + (CA)n Simple_repeat Simple_repeat 2 25 0 411 186 132 23 chr10 17418964 17419005 -128170283 + L1ME2 LINE L1 6129 6164 0 1823 162 17 3 chr10 17419071 17419367 -128169921 - AluJb SINE Alu -12 300 1 274 296 93 10 chr10 17419629 17419748 -128169540 - MIR SINE MIR -62 146 34 2108 133 0 0 chr10 17420389 17420683 -128168605 - AluSq SINE Alu -11 302 9 2306 120 3 0 chr10 17420776 17421084 -128168204 + AluSx SINE Alu 1 309 -3 1521 187 33 23 chr10 17421165 17421464 -128167824 + AluJb SINE Alu 1 302 -10 325 355 138 5 chr10 17421711 17421928 -128167360 + MIR SINE MIR 13 258 -4 471 182 250 20 chr10 17422029 17422177 -128167111 + Tigger1 DNA MER2_type 1 182 -2236 * 634 214 146 10 chr10 17422144 17422336 -128166952 + Tigger1 DNA MER2_type 2201 2418 0 233 314 18 6 chr10 17422662 17422831 -128166457 - L1ME LINE L1 -239 5865 5695 2184 111 10 0 chr10 17424099 17424397 -128164891 + AluSx SINE Alu 1 301 -11 2172 125 0 0 chr10 17424830 17425134 -128164154 + AluSx SINE Alu 1 304 -8 441 282 34 76 chr10 17425265 17426169 -128163119 - L1ME LINE L1 -869 5260 4608 2027 216 48 54 chr10 17426346 17426864 -128162424 + LTR40a LTR ERVL 4 518 -1 423 291 70 101 chr10 17426892 17427034 -128162254 - L1ME LINE L1 -4982 1137 992 1981 152 3 7 chr10 17427034 17427336 -128161952 - AluSx SINE Alu -11 301 1 423 291 70 101 chr10 17427336 17427672 -128161616 - L1ME LINE L1 -5127 992 647 393 22 0 0 chr10 17427672 17427718 -128161570 + (TG)n Simple_repeat Simple_repeat 2 47 0 423 291 70 101 chr10 17427718 17428384 -128160904 - L1ME LINE L1 -5472 647 28 309 333 94 22 chr10 17430916 17431096 -128158192 + MIR3 SINE MIR 7 199 -9 698 252 73 32 chr10 17431282 17431320 -128157968 - MIR SINE MIR -8 254 219 2238 134 0 3 chr10 17431320 17431633 -128157655 - AluSx SINE Alu 0 312 1 698 252 73 32 chr10 17431633 17431812 -128157476 - MIR SINE MIR -43 219 28 499 63 0 0 chr10 17432884 17432947 -128156341 + Alu SINE Alu 1 63 -255 2011 140 0 34 chr10 17433094 17433444 -128155844 + AluSx SINE Alu 1 339 0 2102 126 3 0 chr10 17433879 17434173 -128155115 - AluSx SINE Alu -17 295 1 234 287 111 50 chr10 17434211 17434392 -128154896 - L2 LINE L2 -17 3296 3105 652 298 13 14 chr10 17434398 17434583 -128154705 + MIR SINE MIR 2 180 -62 201 321 7 102 chr10 17434666 17434803 -128154485 - L2 LINE L2 -219 3053 2930 300 350 81 0 chr10 17434817 17434940 -128154348 + MIR3 SINE MIR 73 205 -3 212 380 28 42 chr10 17435579 17435721 -128153567 - MIR3 SINE MIR -53 155 16 2013 56 0 4 chr10 17435989 17436258 -128153030 - L1PA10 LINE L1 -189 5979 5712 218 359 88 19 chr10 17436948 17437107 -128152181 + L2 LINE L2 2237 2406 -908 2113 124 0 3 chr10 17437160 17437451 -128151837 - AluSq SINE Alu -23 290 1 669 76 0 0 chr10 17437517 17437609 -128151679 + L1P4 LINE L1 5689 5780 -386 722 125 0 10 chr10 17437609 17437713 -128151575 - FLAM_C SINE Alu -24 119 17 324 222 20 10 chr10 17437726 17437825 -128151463 - L1MC5 LINE L1 -1124 6837 6738 995 191 0 0 chr10 17437837 17437999 -128151289 - FRAM SINE Alu -15 161 1 2198 115 0 7 chr10 17438007 17438311 -128150977 - AluSc SINE Alu -7 302 1 1775 219 16 67 chr10 17438370 17438402 -128150886 + L1ME1 LINE L1 5572 5604 -562 2362 63 0 40 chr10 17438402 17438704 -128150584 + AluY SINE Alu 1 290 -21 1775 219 16 67 chr10 17438704 17439251 -128150037 + L1ME1 LINE L1 5604 6121 -45 355 305 60 0 chr10 17439150 17439301 -128149987 + L1MA10 LINE L1 6175 6334 0 * 321 292 11 0 chr10 17439309 17439398 -128149890 - MIR SINE MIR -160 102 13 22 0 0 0 chr10 17440785 17440807 -128148481 + AT_rich Low_complexity Low_complexity 1 22 0 346 260 305 24 chr10 17440866 17441112 -128148176 - L2 LINE L2 -10 3303 2989 2093 112 0 3 chr10 17441157 17441443 -128147845 + AluSx SINE Alu 23 307 -5 1153 139 35 0 chr10 17441443 17441616 -128147672 + AluSg/x SINE Alu 134 312 0 316 295 79 7 chr10 17442223 17442362 -128146926 + L1MC3 LINE L1 6708 6856 -929 1057 172 50 14 chr10 17442545 17442557 -128146731 - MER46A DNA MER2_type -2495 236 226 2505 113 3 45 chr10 17442557 17442937 -128146351 - THE1B LTR MaLR 0 364 1 1057 172 50 14 chr10 17442937 17443145 -128146143 - MER46A DNA MER2_type -2505 226 8 305 377 36 7 chr10 17445912 17446050 -128143238 - L2 LINE L2 -220 3052 2911 2291 118 0 0 chr10 17446255 17446561 -128142727 - AluSx SINE Alu 0 312 7 200 264 0 28 chr10 17446748 17446787 -128142501 + A-rich Low_complexity Low_complexity 1 39 -31 2641 128 21 26 chr10 17446787 17447215 -128142073 - MSTB LTR MaLR 0 426 1 200 264 0 28 chr10 17447215 17447247 -128142041 + A-rich Low_complexity Low_complexity 39 70 0 228 337 20 0 chr10 17448008 17448106 -128141182 - MIR3 SINE MIR -14 194 95 24 77 0 0 chr10 17448192 17448244 -128141044 + AT_rich Low_complexity Low_complexity 1 52 0 3230 128 47 6 chr10 17448596 17448918 -128140370 + MER41C LTR ERV1 3 357 -197 339 25 0 0 chr10 17448918 17448958 -128140330 + (CA)n Simple_repeat Simple_repeat 1 40 0 3230 128 47 6 chr10 17448958 17449165 -128140123 + MER41C LTR ERV1 357 554 0 239 0 32 0 chr10 17449539 17449570 -128139718 + (TG)n Simple_repeat Simple_repeat 2 33 0 1299 160 72 96 chr10 17449986 17450005 -128139283 + MLT1B LTR MaLR 37 55 -335 4366 131 26 53 chr10 17450005 17450802 -128138486 - MER4E LTR ERV1 -3 776 1 1299 160 72 96 chr10 17450802 17451145 -128138143 + MLT1B LTR MaLR 55 390 0 2067 125 0 7 chr10 17451351 17451639 -128137649 + AluSx SINE Alu 1 286 -26 4110 91 2 0 chr10 17451675 17452226 -128137062 - MER41A LTR ERV1 0 554 3 1864 157 0 11 chr10 17454100 17454408 -128134880 - AluJb SINE Alu 0 305 1 2190 91 0 10 chr10 17454710 17455008 -128134280 + AluY SINE Alu 1 295 -16 1667 171 0 37 chr10 17455104 17455425 -128133863 + AluJo SINE Alu 1 309 -3 2103 110 0 69 chr10 17458108 17458443 -128130845 - AluSx SINE Alu 0 312 1 1957 120 38 7 chr10 17459348 17459639 -128129649 - AluSx SINE Alu -12 300 1 1732 163 14 10 chr10 17459967 17460256 -128129032 + AluJo SINE Alu 1 290 -22 32 0 0 0 chr10 17460256 17460288 -128129000 + AT_rich Low_complexity Low_complexity 1 32 0 1621 186 3 26 chr10 17460953 17461264 -128128024 - AluJo SINE Alu -8 304 1 321 270 80 10 chr10 17462106 17462206 -128127082 - MIR SINE MIR -70 192 86 2042 125 6 22 chr10 17463760 17464073 -128125215 + AluSx SINE Alu 1 308 -4 288 0 0 0 chr10 17464373 17464405 -128124883 + (T)n Simple_repeat Simple_repeat 1 32 0 312 349 54 0 chr10 17467131 17467260 -128122028 + L1ME4a LINE L1 5716 5851 -391 3684 201 19 1 chr10 17468513 17469249 -128120039 + MSTA-int LTR MaLR 903 1651 0 2389 157 26 9 chr10 17469249 17469670 -128119618 + MSTA LTR MaLR 1 428 0 1296 234 57 41 chr10 17469671 17470162 -128119126 + L1ME4a LINE L1 5491 5989 -132 263 211 53 0 chr10 17470162 17470238 -128119050 + L1ME4a LINE L1 5940 6019 -102 646 244 116 6 chr10 17470284 17470448 -128118840 - MER5A DNA MER1_type 0 189 8 26 74 0 0 chr10 17470472 17470526 -128118762 + AT_rich Low_complexity Low_complexity 1 54 0 431 353 25 47 chr10 17470639 17470874 -128118414 - MIR SINE MIR -13 249 20 22 0 0 0 chr10 17471070 17471092 -128118196 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr10 17471171 17471193 -128118095 + AT_rich Low_complexity Low_complexity 1 22 0 1623 207 23 10 chr10 17471232 17471623 -128117665 - L1MB3 LINE L1 -2 6181 5786 1133 195 69 36 chr10 17471623 17471854 -128117434 + MER2 DNA MER2_type 1 223 -122 2218 112 3 31 chr10 17471854 17472175 -128117113 - AluSx SINE Alu 0 312 1 1133 195 69 36 chr10 17472175 17472207 -128117081 + MER2 DNA MER2_type 223 252 -93 650 202 34 0 chr10 17472207 17472326 -128116962 - FLAM_A SINE Alu -10 123 1 1133 195 69 36 chr10 17472326 17472395 -128116893 + MER2 DNA MER2_type 252 345 0 1889 195 90 16 chr10 17472400 17472947 -128116341 - L1MB3 LINE L1 -401 5782 5195 4664 174 36 19 chr10 17472979 17474512 -128114776 - L1MA6 LINE L1 -6 6996 5443 1687 169 57 6 chr10 17474528 17474877 -128114411 - Tigger2a DNA MER2_type -67 367 1 9943 221 61 30 chr10 17474877 17475386 -128113902 - L1MA6 LINE L1 -1404 5444 4952 7421 32 21 0 chr10 17475386 17476319 -128112969 - L1PA4 LINE L1 0 6155 5213 9943 221 61 30 chr10 17476319 17477053 -128112235 - L1MA6 LINE L1 -1896 4952 4242 2906 79 2 5 chr10 17477053 17477446 -128111842 - L1PA7 LINE L1 0 6154 5763 9943 221 61 30 chr10 17477446 17480445 -128108843 - L1MA6 LINE L1 -2606 4242 1370 939 303 91 30 chr10 17481026 17481633 -128107655 - L1MA6 LINE L1 -6132 717 74 * 2447 226 12 8 chr10 17481631 17482281 -128107007 - L1M4 LINE L1 -934 5212 4560 261 139 0 0 chr10 17484484 17484527 -128104761 + (A)n Simple_repeat Simple_repeat 1 43 0 2217 113 0 3 chr10 17485085 17485387 -128103901 + AluSq SINE Alu 1 301 -12 1638 157 6 62 chr10 17485394 17485718 -128103570 + AluJo SINE Alu 1 306 -6 189 288 109 49 chr10 17485890 17486074 -128103214 + L2 LINE L2 3026 3220 -93 276 316 53 0 chr10 17486362 17486457 -128102831 - MIR SINE MIR -123 139 40 1149 181 0 5 chr10 17487173 17487412 -128101876 + AluJb SINE Alu 86 323 0 569 237 144 21 chr10 17488151 17488345 -128100943 + MIR SINE MIR 43 260 -2 1795 130 59 15 chr10 17488385 17488709 -128100579 + MER44D DNA MER2_type 2 609 0 352 327 12 36 chr10 17488827 17488995 -128100293 - L2 LINE L2 -927 2387 2224 267 236 0 0 chr10 17489139 17489211 -128100077 + (TA)n Simple_repeat Simple_repeat 1 72 0 303 333 0 0 chr10 17489218 17489308 -128099980 + L1MC4 LINE L1 6614 6703 -1339 207 204 0 0 chr10 17489308 17489352 -128099936 + (TA)n Simple_repeat Simple_repeat 2 45 0 310 333 0 0 chr10 17489352 17489442 -128099846 + L1MC4 LINE L1 6614 6703 -1339 2313 96 0 7 chr10 17490325 17490627 -128098661 - AluSq SINE Alu -13 300 1 678 276 67 41 chr10 17491222 17491566 -128097722 + L1ME3A LINE L1 5808 6160 -10 294 296 62 62 chr10 17491609 17491812 -128097476 + HAL1b LINE L1 345 550 -798 970 205 22 119 chr10 17491812 17492216 -128097072 + MLT1A1 LTR MaLR 1 365 0 294 296 62 62 chr10 17492216 17492320 -128096968 + HAL1b LINE L1 549 652 -696 257 227 30 0 chr10 17492362 17492428 -128096860 + (TA)n Simple_repeat Simple_repeat 1 68 0 2349 91 3 0 chr10 17492652 17492949 -128096339 - AluSc SINE Alu -11 298 1 1851 231 52 8 chr10 17494951 17495431 -128093857 + MLT1D LTR MaLR 1 501 -4 2357 144 31 9 chr10 17496294 17496717 -128092571 - MSTB1 LTR MaLR 0 432 1 236 254 174 65 chr10 17496766 17497041 -128092247 + MLT1H LTR MaLR 245 549 0 1929 124 28 14 chr10 17497215 17497498 -128091790 - AluSg SINE Alu -23 287 1 1594 55 0 5 chr10 17497632 17497831 -128091457 + AluY SINE Alu 101 298 -13 409 308 91 29 chr10 17497831 17498205 -128091083 - L1ME LINE L1 -412 5709 5313 1602 221 48 8 chr10 17498674 17499032 -128090256 + MLT1A2 LTR MaLR 3 374 0 270 252 147 49 chr10 17499271 17499414 -128089874 + MIR SINE MIR 13 169 -93 1919 140 0 52 chr10 17499593 17499921 -128089367 + AluSx SINE Alu 1 311 -1 1616 158 83 70 chr10 17501152 17501537 -128087751 + MLT1B LTR MaLR 1 390 0 268 326 54 46 chr10 17501880 17501921 -128087367 + L1MEc LINE L1 274 313 -6250 2567 95 24 11 chr10 17501921 17502291 -128086997 - THE1C LTR MaLR 0 375 1 268 326 54 46 chr10 17502291 17502617 -128086671 + L1MEc LINE L1 313 644 -5919 440 250 48 108 chr10 17502827 17503390 -128085898 + L1MEc LINE L1 796 1324 -5239 312 291 101 14 chr10 17503428 17503576 -128085712 + L1MEc LINE L1 1174 1334 -5050 612 257 51 36 chr10 17503848 17504179 -128085109 + L1MEc LINE L1 1743 2078 -4485 828 236 113 25 chr10 17504228 17504549 -128084739 + L1MEc LINE L1 2926 3296 -3086 2161 105 0 16 chr10 17504549 17504853 -128084435 + AluY SINE Alu 1 299 -12 828 236 113 25 chr10 17504853 17504963 -128084325 + L1MEc LINE L1 3296 3395 -2987 5694 73 0 3 chr10 17505092 17505831 -128083457 - L1PA8 LINE L1 -16 6156 5420 1287 52 0 0 chr10 17505843 17505997 -128083291 - AluY SINE Alu 0 311 158 2179 105 27 0 chr10 17505999 17506295 -128082993 - AluSp SINE Alu -9 304 1 3899 227 148 10 chr10 17506313 17507745 -128081543 + L1MEc LINE L1 3648 5277 -1105 548 217 36 18 chr10 17507740 17507906 -128081382 + L1MB8 LINE L1 5979 6147 -31 * 514 311 44 17 chr10 17508054 17508234 -128081054 - L2 LINE L2 -558 2756 2572 25 0 0 0 chr10 17508990 17509015 -128080273 + AT_rich Low_complexity Low_complexity 1 25 0 202 206 221 0 chr10 17509721 17509789 -128079499 + MIR SINE MIR 64 146 -62 1713 188 7 7 chr10 17510234 17510543 -128078745 + AluJo SINE Alu 1 309 -3 189 107 0 0 chr10 17511004 17511032 -128078256 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 513 232 67 55 chr10 17511604 17511761 -128077527 - MIR SINE MIR -5 257 94 2165 123 27 30 chr10 17511761 17512126 -128077162 - THE1B LTR MaLR 0 364 1 513 232 67 55 chr10 17512126 17512222 -128077066 - MIR SINE MIR -168 94 1 207 0 0 0 chr10 17513050 17513073 -128076215 + (T)n Simple_repeat Simple_repeat 1 23 0 1332 235 104 58 chr10 17513588 17514147 -128075141 + L2 LINE L2 2123 2714 -600 1650 188 0 3 chr10 17514147 17514429 -128074859 + AluJo SINE Alu 13 293 -19 1332 235 104 58 chr10 17514429 17514477 -128074811 + L2 LINE L2 2714 2758 -556 1953 209 60 28 chr10 17514478 17514947 -128074341 - MLT1D LTR MaLR 0 505 22 665 235 182 19 chr10 17514949 17515413 -128073875 + L2 LINE L2 2754 3311 -2 372 267 142 36 chr10 17516310 17516535 -128072753 + MIR SINE MIR 14 262 0 219 336 9 18 chr10 17517125 17517235 -128072053 - MER5B DNA MER1_type -69 109 1 2130 122 3 3 chr10 17517248 17517551 -128071737 - AluJb SINE Alu -9 303 1 210 160 20 20 chr10 17517997 17518047 -128071241 - L2 LINE L2 -74 3239 3190 1357 157 48 13 chr10 17520160 17520389 -128068899 - AluJo SINE Alu -19 293 57 30 0 0 0 chr10 17520843 17520873 -128068415 + AT_rich Low_complexity Low_complexity 1 30 0 2000 155 0 3 chr10 17521500 17521803 -128067485 - AluJb SINE Alu -6 306 5 23 0 0 0 chr10 17521807 17521830 -128067458 + AT_rich Low_complexity Low_complexity 1 23 0 1828 163 20 47 chr10 17521833 17522237 -128067051 - L1MA8 LINE L1 -2 6289 5897 966 154 77 5 chr10 17522538 17522733 -128066555 + L1MB2 LINE L1 5962 6170 -1 2460 153 16 25 chr10 17522746 17523184 -128066104 + Tigger2a DNA MER2_type 1 434 0 250 96 53 32 chr10 17523184 17523278 -128066010 + (TG)n Simple_repeat Simple_repeat 1 96 0 464 139 42 18 chr10 17523355 17523521 -128065767 + (TG)n Simple_repeat Simple_repeat 2 171 0 27 0 0 0 chr10 17523624 17523651 -128065637 + AT_rich Low_complexity Low_complexity 1 27 0 442 284 47 38 chr10 17524862 17525073 -128064215 + MIR SINE MIR 20 232 -30 22 0 0 0 chr10 17525577 17525599 -128063689 + AT_rich Low_complexity Low_complexity 1 22 0 1726 173 0 24 chr10 17525602 17525897 -128063391 + AluJb SINE Alu 1 288 -24 2349 103 3 0 chr10 17526612 17526922 -128062366 + AluSq SINE Alu 1 311 -2 1891 151 13 16 chr10 17527319 17527624 -128061664 - AluSx SINE Alu -5 307 4 313 250 206 31 chr10 17527654 17527814 -128061474 + L2 LINE L2 3121 3308 -5 2221 120 0 0 chr10 17527959 17528260 -128061028 + AluY SINE Alu 1 301 -10 201 122 49 0 chr10 17528679 17528720 -128060568 + (TA)n Simple_repeat Simple_repeat 2 44 0 1932 87 64 0 chr10 17529142 17529407 -128059881 + AluSc SINE Alu 25 306 -3 2436 151 39 5 chr10 17529602 17530014 -128059274 - MSTA LTR MaLR -2 426 1 22 35 0 0 chr10 17530613 17530642 -128058646 + AT_rich Low_complexity Low_complexity 1 29 0 213 121 0 0 chr10 17531718 17531751 -128057537 + (CA)n Simple_repeat Simple_repeat 2 34 0 2096 139 3 0 chr10 17532818 17533112 -128056176 + AluSq SINE Alu 1 295 -18 1977 136 48 0 chr10 17533116 17533238 -128056050 + AluSq SINE Alu 1 116 -197 198 0 0 0 chr10 17533238 17533260 -128056028 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 1977 136 48 0 chr10 17533260 17533432 -128055856 + AluSq SINE Alu 116 309 -4 380 180 126 45 chr10 17534580 17534691 -128054597 + MIR3 SINE MIR 83 202 -6 707 244 5 46 chr10 17535687 17535884 -128053404 - MER3 DNA MER1_type -19 190 2 781 220 35 0 chr10 17535893 17536066 -128053222 - MER5A DNA MER1_type 0 189 11 207 0 0 0 chr10 17537342 17537365 -128051923 + (A)n Simple_repeat Simple_repeat 1 23 0 243 61 0 0 chr10 17539026 17539059 -128050229 + (A)n Simple_repeat Simple_repeat 1 33 0 1928 153 27 0 chr10 17539309 17539609 -128049679 + AluJb SINE Alu 1 308 -4 1749 137 12 0 chr10 17540718 17540973 -128048315 + AluSx SINE Alu 44 301 -11 1001 167 261 29 chr10 17541202 17541447 -128047841 + AluJo SINE Alu 1 302 0 24 0 0 0 chr10 17543186 17543210 -128046078 + AT_rich Low_complexity Low_complexity 1 24 0 426 87 0 29 chr10 17543294 17543363 -128045925 - Alu SINE Alu -5 307 241 1116 145 124 0 chr10 17544403 17544596 -128044692 - AluJo SINE Alu -10 302 86 200 238 0 32 chr10 17545046 17545109 -128044179 + GA-rich Low_complexity Low_complexity 5 65 0 1303 199 63 11 chr10 17546641 17546927 -128042361 - AluJo SINE Alu -11 301 1 843 159 0 0 chr10 17548089 17548221 -128041067 + FLAM_C SINE Alu 1 132 -1 27 0 0 0 chr10 17548854 17548881 -128040407 + AT_rich Low_complexity Low_complexity 1 27 0 1967 160 3 3 chr10 17549289 17549595 -128039693 - AluJb SINE Alu -6 306 1 2106 132 0 0 chr10 17549743 17550038 -128039250 - AluSc SINE Alu -14 295 1 180 97 0 0 chr10 17550041 17550072 -128039216 + (TTTTTG)n Simple_repeat Simple_repeat 2 32 0 888 259 127 3 chr10 17550134 17550466 -128038822 - L1MC4 LINE L1 -150 7892 7520 941 237 24 0 chr10 17550472 17550644 -128038644 - AluJb SINE Alu -16 296 117 195 42 0 0 chr10 17550644 17550668 -128038620 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 941 237 24 0 chr10 17550668 17550702 -128038586 - AluJb SINE Alu -195 117 85 2400 121 55 38 chr10 17550738 17550920 -128038368 - MSTA LTR MaLR -1 427 250 2659 93 11 16 chr10 17550920 17551285 -128038003 - THE1B LTR MaLR -1 363 1 2400 121 55 38 chr10 17551285 17551387 -128037901 - MSTA LTR MaLR -178 250 151 2962 98 43 14 chr10 17551387 17551791 -128037497 + MLT2A2 LTR ERVL 1 421 -32 807 108 0 0 chr10 17551791 17551911 -128037377 + (TA)n Simple_repeat Simple_repeat 1 120 0 2962 98 43 14 chr10 17551911 17551946 -128037342 + MLT2A2 LTR ERVL 421 453 0 2400 121 55 38 chr10 17551946 17552080 -128037208 - MSTA LTR MaLR -277 151 1 658 230 74 39 chr10 17552080 17552310 -128036978 - L1MC4 LINE L1 -565 7477 7240 324 207 11 81 chr10 17552327 17552414 -128036874 + MER20 DNA MER1_type 4 84 -135 274 250 0 0 chr10 17552409 17552473 -128036815 + Charlie5 DNA MER1_type 2521 2584 -28 * 433 268 16 16 chr10 17552483 17552606 -128036682 + MER20 DNA MER1_type 97 219 0 1607 248 26 75 chr10 17552607 17553211 -128036077 - L1MC4a LINE L1 -813 6995 6421 2188 147 28 0 chr10 17553887 17554241 -128035047 + THE1B LTR MaLR 1 364 0 275 268 82 0 chr10 17554532 17554629 -128034659 - MLT1J LTR MaLR 0 511 407 1570 195 37 28 chr10 17554693 17555047 -128034241 + MLT1A1 LTR MaLR 9 365 0 1010 241 122 4 chr10 17555047 17555325 -128033963 - MLT1J LTR MaLR -200 311 1 2037 156 119 8 chr10 17557006 17557391 -128031897 + MSTA LTR MaLR 1 428 0 1878 114 0 0 chr10 17557455 17557700 -128031588 - AluSx SINE Alu -57 255 11 29 0 0 0 chr10 17557704 17557733 -128031555 + AT_rich Low_complexity Low_complexity 1 29 0 1989 128 29 10 chr10 17557735 17558041 -128031247 + AluSx SINE Alu 1 312 0 2155 117 14 0 chr10 17558623 17558914 -128030374 - AluSg SINE Alu -15 295 1 22 56 0 0 chr10 17559437 17559473 -128029815 + AT_rich Low_complexity Low_complexity 1 36 0 207 319 25 34 chr10 17560045 17560164 -128029124 - L2 LINE L2 -10 3262 3145 2748 164 57 20 chr10 17560198 17560687 -128028601 + MLT2B2 LTR ERVL 2 508 -7 490 301 48 21 chr10 17560922 17561108 -128028180 - MIR3 SINE MIR -1 207 17 2405 90 0 6 chr10 17561457 17561769 -128027519 + AluSx SINE Alu 3 312 0 576 268 52 31 chr10 17561785 17561979 -128027309 - MIR SINE MIR 0 262 65 300 139 0 0 chr10 17563599 17563642 -128025646 + MER66B LTR ERV1 304 346 -140 2257 98 0 0 chr10 17564233 17564530 -128024758 - AluSx SINE Alu 0 312 16 2424 142 27 3 chr10 17564715 17565081 -128024207 + THE1C LTR MaLR 1 375 0 3218 213 62 35 chr10 17565625 17565890 -128023398 + L1MC2 LINE L1 8 264 -5969 255 31 0 0 chr10 17565890 17565922 -128023366 + (CAA)n Simple_repeat Simple_repeat 2 33 0 3218 213 62 35 chr10 17565922 17566998 -128022290 + L1MC2 LINE L1 264 1384 -4849 10252 214 46 35 chr10 17567009 17568318 -128020970 + L1MC2 LINE L1 2181 3474 -3288 263 74 481 0 chr10 17568318 17568372 -128020916 + MADE1 DNA Mariner 1 80 0 10252 214 46 35 chr10 17568372 17571384 -128017904 + L1MC2 LINE L1 3474 6589 -173 1341 111 0 43 chr10 17571384 17571611 -128017677 + AluSg/x SINE Alu 84 301 0 641 212 60 13 chr10 17571612 17571763 -128017525 + L1MC2 LINE L1 6583 6740 -22 2315 51 31 17 chr10 17571773 17572067 -128017221 + AluY SINE Alu 1 298 -13 569 319 97 0 chr10 17572757 17572964 -128016324 + MIR SINE MIR 13 239 -23 1827 132 7 28 chr10 17573144 17573432 -128015856 - AluSx SINE Alu -18 294 13 2354 88 0 0 chr10 17574130 17574427 -128014861 + AluY SINE Alu 6 302 -9 2061 128 3 19 chr10 17574581 17574894 -128014394 + AluSq SINE Alu 3 310 -3 232 339 68 0 chr10 17574896 17575014 -128014274 + MIR SINE MIR 56 181 -81 2106 171 18 33 chr10 17575079 17575471 -128013817 + MLT1B LTR MaLR 1 386 -4 21 0 0 0 chr10 17575970 17575991 -128013297 + AT_rich Low_complexity Low_complexity 1 21 0 2070 122 0 31 chr10 17576322 17576642 -128012646 + AluSx SINE Alu 1 310 -2 1426 196 44 86 chr10 17577118 17577163 -128012125 + MER7A DNA MER2_type 2 47 -2991 1507 183 0 0 chr10 17577163 17577420 -128011868 + AluJb SINE Alu 41 297 -15 1426 196 44 86 chr10 17577420 17577736 -128011552 + MER7A DNA MER2_type 47 346 0 686 216 114 0 chr10 17577739 17577906 -128011382 - MIR SINE MIR -2 260 75 2412 89 0 6 chr10 17578543 17578857 -128010431 + AluSx SINE Alu 1 312 0 907 174 108 15 chr10 17579369 17579564 -128009724 - AluJo SINE Alu -16 296 84 384 276 102 53 chr10 17579860 17580106 -128009182 - MIR SINE MIR -2 260 3 1894 156 0 28 chr10 17580541 17580862 -128008426 + AluJo SINE Alu 1 312 0 298 349 83 78 chr10 17581932 17582330 -128006958 - L2 LINE L2 -1 3271 2872 663 273 64 14 chr10 17582459 17582711 -128006577 + Charlie8 DNA MER1_type 28 279 -2138 1499 219 102 8 chr10 17584929 17585321 -128003967 - L1MC4 LINE L1 -407 7635 7207 983 237 71 4 chr10 17585495 17585748 -128003540 - MLT1B LTR MaLR 0 390 121 308 318 83 37 chr10 17585748 17585965 -128003323 - HAL1 LINE L1 -1481 1026 800 980 204 212 0 chr10 17586317 17586586 -128002702 - MER21B LTR ERV1 -11 852 527 330 281 45 0 chr10 17586819 17586908 -128002380 + L2 LINE L2 3180 3272 0 25 31 0 0 chr10 17587157 17587189 -128002099 + AT_rich Low_complexity Low_complexity 1 32 0 552 273 122 18 chr10 17587285 17587571 -128001717 - L3 LINE CR1 -576 1001 686 855 142 0 0 chr10 17587618 17587745 -128001543 - AluSg/x SINE Alu -19 291 165 2679 161 9 14 chr10 17588171 17588599 -128000689 + MSTB LTR MaLR 1 426 0 6470 184 10 1 chr10 17588599 17589715 -127999573 + MSTB-int LTR MaLR 1 1126 -525 600 251 156 0 chr10 17590021 17590220 -127999068 - MIR SINE MIR -1 261 32 1660 200 0 10 chr10 17590427 17590737 -127998551 - AluJo SINE Alu -5 307 1 2144 124 3 7 chr10 17590900 17591206 -127998082 - AluSx SINE Alu -7 305 1 998 179 0 39 chr10 17591649 17591856 -127997432 + L1MB8 LINE L1 5980 6178 0 360 0 0 0 chr10 17592013 17592053 -127997235 + (TG)n Simple_repeat Simple_repeat 2 41 0 327 278 111 19 chr10 17592091 17592199 -127997089 - L2 LINE L2 0 3313 3196 212 169 0 17 chr10 17592743 17592802 -127996486 + (TATG)n Simple_repeat Simple_repeat 3 60 0 503 299 54 9 chr10 17593485 17593709 -127995579 + L1ME4a LINE L1 5669 5902 -219 1928 121 4 0 chr10 17593995 17594267 -127995021 - AluSx SINE Alu -26 286 14 307 325 19 39 chr10 17594504 17594658 -127994630 - MER5A DNA MER1_type -4 185 35 2261 103 0 13 chr10 17594815 17595115 -127994173 + AluSq SINE Alu 1 296 -17 805 99 0 0 chr10 17596192 17596303 -127992985 - AluY SINE Alu -3 308 198 2100 130 23 0 chr10 17596308 17596608 -127992680 - AluSx SINE Alu -5 307 1 2057 123 32 0 chr10 17597193 17597478 -127991810 + AluSx SINE Alu 1 294 -18 216 67 0 0 chr10 17598212 17598242 -127991046 + (TG)n Simple_repeat Simple_repeat 1 30 0 193 0 0 86 chr10 17600015 17600050 -127989238 + (GAAA)n Simple_repeat Simple_repeat 2 33 0 22 0 0 0 chr10 17600261 17600283 -127989005 + AT_rich Low_complexity Low_complexity 1 22 0 307 347 69 35 chr10 17601029 17601202 -127988086 + L2 LINE L2 2995 3173 -99 289 281 22 11 chr10 17601673 17601762 -127987526 - MIR3 SINE MIR -36 172 83 484 161 0 0 chr10 17602178 17602265 -127987023 + L1MB8 LINE L1 6083 6169 -9 221 346 63 79 chr10 17603609 17603976 -127985312 + L2 LINE L2 382 742 -2572 2176 129 0 3 chr10 17605024 17605326 -127983962 - AluSx SINE Alu -11 301 1 7777 20 2 8 chr10 17605754 17606613 -127982675 + L1PA4 LINE L1 5300 6153 -2 835 277 121 39 chr10 17607678 17608141 -127981147 + L2 LINE L2 2541 3032 -281 1146 132 12 0 chr10 17608147 17608314 -127980974 + AluSg/x SINE Alu 137 305 -7 213 222 37 25 chr10 17608350 17608431 -127980857 + L2 LINE L2 3081 3162 -151 1335 163 5 0 chr10 17608433 17608642 -127980646 - AluJo SINE Alu -16 296 87 450 288 27 34 chr10 17608646 17608792 -127980496 + L2 LINE L2 3168 3312 -1 411 279 188 49 chr10 17608821 17609570 -127979718 + L2 LINE L2 2369 3278 -35 287 229 12 24 chr10 17610175 17610258 -127979030 + (CATATA)n Simple_repeat Simple_repeat 5 86 0 2238 117 3 0 chr10 17610373 17610682 -127978606 + AluSq SINE Alu 2 311 -2 1876 151 13 16 chr10 17611079 17611384 -127977904 - AluSx SINE Alu -5 307 4 359 244 206 31 chr10 17611414 17611574 -127977714 + L2 LINE L2 3121 3308 -5 2203 120 0 0 chr10 17611719 17612020 -127977268 + AluY SINE Alu 1 301 -10 189 279 0 49 chr10 17612371 17612432 -127976856 - MIR SINE MIR 0 262 205 201 122 49 0 chr10 17612439 17612480 -127976808 + (TA)n Simple_repeat Simple_repeat 2 44 0 1919 87 64 0 chr10 17612902 17613167 -127976121 + AluSc SINE Alu 25 306 -3 2564 151 39 5 chr10 17613362 17613774 -127975514 - MSTA LTR MaLR -2 426 1 22 35 0 0 chr10 17614373 17614402 -127974886 + AT_rich Low_complexity Low_complexity 1 29 0 213 121 0 0 chr10 17615478 17615511 -127973777 + (CA)n Simple_repeat Simple_repeat 2 34 0 2074 139 3 0 chr10 17616578 17616872 -127972416 + AluSq SINE Alu 1 295 -18 1958 136 48 0 chr10 17616876 17616998 -127972290 + AluSq SINE Alu 1 116 -197 198 0 0 0 chr10 17616998 17617020 -127972268 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 1958 136 48 0 chr10 17617020 17617192 -127972096 + AluSq SINE Alu 116 309 -4 414 180 126 45 chr10 17618340 17618451 -127970837 + MIR3 SINE MIR 83 202 -6 715 244 5 46 chr10 17619447 17619644 -127969644 - MER3 DNA MER1_type -19 190 2 841 220 35 0 chr10 17619653 17619826 -127969462 - MER5A DNA MER1_type 0 189 11 207 0 0 0 chr10 17621102 17621125 -127968163 + (A)n Simple_repeat Simple_repeat 1 23 0 222 91 0 0 chr10 17622786 17622819 -127966469 + (A)n Simple_repeat Simple_repeat 1 33 0 1907 153 27 0 chr10 17623069 17623369 -127965919 + AluJb SINE Alu 1 308 -4 1728 137 12 0 chr10 17624478 17624733 -127964555 + AluSx SINE Alu 44 301 -11 1097 167 261 29 chr10 17624962 17625207 -127964081 + AluJo SINE Alu 1 302 0 24 0 0 0 chr10 17626946 17626970 -127962318 + AT_rich Low_complexity Low_complexity 1 24 0 447 87 0 29 chr10 17627054 17627123 -127962165 - Alu SINE Alu -5 307 241 1112 145 124 0 chr10 17628163 17628356 -127960932 - AluJo SINE Alu -10 302 86 200 238 0 32 chr10 17628806 17628869 -127960419 + GA-rich Low_complexity Low_complexity 5 65 0 1286 199 63 11 chr10 17630401 17630687 -127958601 - AluJo SINE Alu -11 301 1 889 159 0 0 chr10 17631849 17631981 -127957307 + FLAM_C SINE Alu 1 132 -1 27 0 0 0 chr10 17632614 17632641 -127956647 + AT_rich Low_complexity Low_complexity 1 27 0 198 0 0 0 chr10 17633573 17633595 -127955693 + (A)n Simple_repeat Simple_repeat 1 22 0 805 99 0 0 chr10 17634045 17634156 -127955132 - AluY SINE Alu -3 308 198 2100 130 23 0 chr10 17634161 17634461 -127954827 - AluSx SINE Alu -5 307 1 2033 126 32 0 chr10 17635046 17635331 -127953957 + AluSx SINE Alu 1 294 -18 219 88 0 0 chr10 17636065 17636099 -127953189 + (TG)n Simple_repeat Simple_repeat 1 34 0 193 0 0 86 chr10 17637872 17637907 -127951381 + (GAAA)n Simple_repeat Simple_repeat 2 33 0 22 0 0 0 chr10 17638118 17638140 -127951148 + AT_rich Low_complexity Low_complexity 1 22 0 318 341 75 35 chr10 17638884 17639057 -127950231 + L2 LINE L2 2994 3173 -99 289 281 22 11 chr10 17639528 17639617 -127949671 - MIR3 SINE MIR -36 172 83 484 161 0 0 chr10 17640033 17640120 -127949168 + L1MB8 LINE L1 6083 6169 -9 221 346 63 79 chr10 17641464 17641831 -127947457 + L2 LINE L2 382 742 -2572 2176 129 0 3 chr10 17642879 17643181 -127946107 - AluSx SINE Alu -11 301 1 7777 20 2 8 chr10 17643609 17644468 -127944820 + L1PA4 LINE L1 5300 6153 -2 880 269 121 39 chr10 17645533 17645996 -127943292 + L2 LINE L2 2541 3032 -281 1161 126 12 0 chr10 17646002 17646169 -127943119 + AluSg/x SINE Alu 137 305 -7 213 222 37 25 chr10 17646205 17646286 -127943002 + L2 LINE L2 3081 3162 -151 1335 163 5 0 chr10 17646288 17646497 -127942791 - AluJo SINE Alu -16 296 87 450 288 27 34 chr10 17646501 17646647 -127942641 + L2 LINE L2 3168 3312 -1 411 279 188 49 chr10 17646676 17647425 -127941863 + L2 LINE L2 2369 3278 -35 287 229 12 24 chr10 17648030 17648113 -127941175 + (CATATA)n Simple_repeat Simple_repeat 5 86 0 2316 94 3 0 chr10 17648228 17648526 -127940762 + AluSp SINE Alu 2 300 -13 227 269 30 104 chr10 17649811 17649945 -127939343 + L2 LINE L2 3190 3313 0 2418 240 90 9 chr10 17650092 17650779 -127938509 + MER20B DNA MER1_type 7 749 -34 2150 125 13 0 chr10 17650779 17651083 -127938205 + AluSq SINE Alu 6 313 0 2142 71 0 8 chr10 17651418 17651685 -127937603 + AluY SINE Alu 1 265 -46 264 167 0 0 chr10 17651685 17651739 -127937549 + Alu SINE Alu 238 291 -10 262 254 25 82 chr10 17651781 17651903 -127937385 + L2 LINE L2 3122 3236 -36 298 231 68 82 chr10 17652655 17652802 -127936486 - MIR SINE MIR -24 238 94 1720 189 3 6 chr10 17652940 17653253 -127936035 - AluJb SINE Alu 0 312 1 2077 112 0 3 chr10 17654705 17655023 -127934265 - AluSx SINE Alu 0 317 1 677 210 0 9 chr10 17655819 17656251 -127933037 + CT-rich Low_complexity Low_complexity 1 427 0 731 210 2 0 chr10 17656277 17656798 -127932490 + CT-rich Low_complexity Low_complexity 1 522 0 202 352 32 24 chr10 17658361 17658486 -127930802 - L2 LINE L2 -235 3037 2912 262 108 0 0 chr10 17659146 17659183 -127930105 + (TTCC)n Simple_repeat Simple_repeat 3 39 0 491 227 0 38 chr10 17659183 17659368 -127929920 + CT-rich Low_complexity Low_complexity 1 178 0 731 203 0 8 chr10 17659372 17659495 -127929793 - FLAM_A SINE Alu -11 122 1 228 171 24 134 chr10 17659859 17659941 -127929347 + MLT1H LTR MaLR 477 549 0 5058 210 37 18 chr10 17661817 17662560 -127926728 + L1MC/D LINE L1 3881 4608 -1630 1867 170 0 13 chr10 17662560 17662872 -127926416 - AluJo SINE Alu -4 308 1 5058 210 37 18 chr10 17662872 17663711 -127925577 + L1MC/D LINE L1 4608 5495 -743 391 323 19 4 chr10 17663799 17664062 -127925226 + L1MEc LINE L1 1538 1804 -4592 500 285 104 25 chr10 17664079 17664747 -127924541 + L1MEc LINE L1 1875 2561 -3654 320 345 154 35 chr10 17664747 17665297 -127923991 + L2 LINE L2 2246 2861 -453 2168 112 3 3 chr10 17665416 17665712 -127923576 - AluSx SINE Alu -16 296 1 415 321 41 25 chr10 17665782 17665978 -127923310 - MIR SINE MIR -59 203 5 2053 108 4 0 chr10 17666119 17666398 -127922890 + AluSg SINE Alu 1 280 -30 324 0 0 0 chr10 17666411 17666447 -127922841 + (CA)n Simple_repeat Simple_repeat 1 36 0 493 299 57 15 chr10 17666491 17666691 -127922597 + MIR SINE MIR 11 213 -49 182 174 22 0 chr10 17668019 17668065 -127921223 + CT-rich Low_complexity Low_complexity 3 49 0 2198 105 33 7 chr10 17668898 17669202 -127920086 - AluSp SINE Alu -1 312 1 * 2248 106 0 28 chr10 17669201 17669522 -127919766 - AluSq SINE Alu -1 312 1 235 250 0 0 chr10 17669755 17669807 -127919481 + LTR30 LTR ERV1 1 52 -670 604 143 57 109 chr10 17669807 17670031 -127919257 + LTR12 LTR ERV1 100 285 -429 278 235 0 0 chr10 17670032 17670100 -127919188 + LTR30 LTR ERV1 553 620 -102 723 158 25 0 chr10 17670100 17670220 -127919068 + pTR5 LTR ERV1 45 167 -2271 2142 109 4 0 chr10 17673417 17673692 -127915596 - AluSx SINE Alu -7 305 30 219 368 53 0 chr10 17674315 17674391 -127914897 - L2 LINE L2 -43 3229 3150 675 257 77 57 chr10 17674674 17675075 -127914213 + MLT1I LTR MaLR 1 409 0 1985 119 6 45 chr10 17675285 17675596 -127913692 - AluSx SINE Alu -13 299 1 38 0 0 0 chr10 17675669 17675707 -127913581 + AT_rich Low_complexity Low_complexity 1 38 0 1961 138 3 49 chr10 17676199 17676525 -127912763 + AluSx SINE Alu 1 311 -1 249 83 0 0 chr10 17676597 17676633 -127912655 + (TA)n Simple_repeat Simple_repeat 1 36 0 1325 178 204 3 chr10 17676685 17676989 -127912299 + MLT1A1 LTR MaLR 1 365 0 252 0 0 0 chr10 17677368 17677396 -127911892 + (TAGG)n Simple_repeat Simple_repeat 2 29 0 2280 113 0 0 chr10 17677704 17678015 -127911273 + AluSx SINE Alu 1 311 -1 409 278 52 113 chr10 17678051 17678299 -127910989 + MIR SINE MIR 18 250 -12 392 330 78 10 chr10 17680596 17680802 -127908486 - L1M4 LINE L1 -916 5230 5011 463 228 112 93 chr10 17681639 17681854 -127907434 + MER20 DNA MER1_type 1 219 0 2198 122 0 0 chr10 17682272 17682567 -127906721 + AluSx SINE Alu 1 295 -17 333 314 31 18 chr10 17682618 17682847 -127906441 - L1ME LINE L1 -295 5826 5595 2643 243 6 16 chr10 17682924 17683604 -127905684 - L1MB7 LINE L1 -129 6055 5383 331 296 72 85 chr10 17683872 17683987 -127905301 + MLT1K LTR MaLR 180 295 -293 717 261 101 0 chr10 17683987 17684175 -127905113 + MER63A DNA MER1_type 2 208 -2 331 296 72 85 chr10 17684175 17684447 -127904841 + MLT1K LTR MaLR 295 562 -26 2113 126 10 0 chr10 17686997 17687381 -127901907 + AluSx SINE Alu 1 387 0 23 33 0 0 chr10 17688218 17688248 -127901040 + AT_rich Low_complexity Low_complexity 1 30 0 2245 88 0 10 chr10 17688251 17688547 -127900741 - AluY SINE Alu -18 293 1 219 237 26 13 chr10 17689692 17689768 -127899520 + (TA)n Simple_repeat Simple_repeat 2 78 0 292 255 64 43 chr10 17689775 17689869 -127899419 - MIR SINE MIR -95 113 18 321 254 201 27 chr10 17690125 17690349 -127898939 - L1ME4a LINE L1 -13 6108 5846 2375 82 3 0 chr10 17691066 17691360 -127897928 - AluSp SINE Alu -18 295 1 21 0 0 0 chr10 17691360 17691381 -127897907 + AT_rich Low_complexity Low_complexity 1 21 0 4477 126 20 48 chr10 17691819 17692661 -127896627 + L1MA8 LINE L1 5466 6284 -7 298 302 47 52 chr10 17693834 17693895 -127895393 - MER5A DNA MER1_type -3 186 126 1627 97 39 130 chr10 17693895 17694226 -127895062 + AluSp SINE Alu 1 301 -12 298 302 47 52 chr10 17694226 17694336 -127894952 - MER5A DNA MER1_type -63 126 16 194 269 30 15 chr10 17695853 17695920 -127893368 - L2 LINE L2 -655 2659 2592 419 249 109 24 chr10 17696039 17696204 -127893084 + MER20 DNA MER1_type 1 179 -40 22 0 0 0 chr10 17696754 17696776 -127892512 + AT_rich Low_complexity Low_complexity 1 22 0 1816 151 14 7 chr10 17696779 17697064 -127892224 - AluJb SINE Alu -23 289 3 738 216 28 0 chr10 17697492 17697668 -127891620 - L1MD2 LINE L1 -26 6333 6153 252 0 0 0 chr10 17697668 17697696 -127891592 + (TG)n Simple_repeat Simple_repeat 2 29 0 1569 208 62 20 chr10 17697726 17698164 -127891124 - L1MD1 LINE L1 -160 6342 5887 1870 240 63 21 chr10 17698195 17699128 -127890160 - L1MD1 LINE L1 -743 5663 4751 854 272 36 8 chr10 17699171 17699421 -127889867 + MER76 LTR ERV 432 688 0 4025 243 59 30 chr10 17699426 17699612 -127889676 - L1MD1 LINE L1 -3316 3090 2911 321 89 0 0 chr10 17699612 17699657 -127889631 + (CA)n Simple_repeat Simple_repeat 2 46 0 4025 243 59 30 chr10 17699657 17702184 -127887104 - L1MD1 LINE L1 -3495 2911 273 218 105 26 0 chr10 17702335 17702373 -127886915 + (TA)n Simple_repeat Simple_repeat 2 40 0 254 299 51 29 chr10 17702519 17702656 -127886632 - MIR SINE MIR -57 205 66 208 319 159 6 chr10 17704351 17704508 -127884780 + L2 LINE L2 2698 2878 -436 433 316 65 56 chr10 17704593 17704824 -127884464 + MIR SINE MIR 8 240 -22 201 128 64 21 chr10 17705197 17705244 -127884044 + T-rich Low_complexity Low_complexity 4 52 0 2043 138 3 0 chr10 17705844 17706134 -127883154 + AluSx SINE Alu 1 291 -21 310 232 11 32 chr10 17706159 17706254 -127883034 - L1MC4 LINE L1 -1333 6709 6617 871 116 0 58 chr10 17706256 17706601 -127882687 + (TA)n Simple_repeat Simple_repeat 1 325 0 23 68 0 0 chr10 17706621 17706665 -127882623 + AT_rich Low_complexity Low_complexity 1 44 0 271 319 53 41 chr10 17706910 17707230 -127882058 + L1MEd LINE L1 60 383 -5736 588 296 79 24 chr10 17707299 17707715 -127881573 + L1M4 LINE L1 3725 4163 -1983 90 51 0 6 chr10 17707850 17707913 -127881375 + AT_rich Low_complexity Low_complexity 1 63 -93 186 0 0 81 chr10 17707913 17707950 -127881338 + (TTA)n Simple_repeat Simple_repeat 1 34 0 90 51 0 6 chr10 17707950 17708043 -127881245 + AT_rich Low_complexity Low_complexity 63 156 0 242 243 81 0 chr10 17708055 17708191 -127881097 + L1M4 LINE L1 4329 4475 -1671 1775 183 3 3 chr10 17710097 17710425 -127878863 + AluJo SINE Alu 1 312 0 2154 133 3 0 chr10 17712408 17712709 -127876579 - AluSq SINE Alu -10 303 2 2781 10 0 10 chr10 17713138 17713451 -127875837 - AluYb8 SINE Alu -8 310 1 193 337 45 0 chr10 17713612 17713701 -127875587 - MIR SINE MIR -70 192 100 787 136 19 31 chr10 17714288 17714529 -127874759 + CT-rich Low_complexity Low_complexity 1 238 0 494 287 38 24 chr10 17714823 17715032 -127874256 + HAL1 LINE L1 771 982 -1525 28 48 0 0 chr10 17715032 17715074 -127874214 + AT_rich Low_complexity Low_complexity 1 42 0 1274 271 94 31 chr10 17715090 17715806 -127873482 + HAL1 LINE L1 1622 2382 -125 348 254 232 0 chr10 17715961 17716138 -127873150 + L1ME4a LINE L1 5901 6118 -3 1543 275 112 20 chr10 17716595 17717468 -127871820 - L2 LINE L2 0 3313 2367 2140 125 20 0 chr10 17718551 17718854 -127870434 + AluSg SINE Alu 1 309 -1 325 193 0 0 chr10 17718856 17718913 -127870375 + AluJ/FLAM SINE Alu 1 57 -245 337 267 43 52 chr10 17719174 17719290 -127869998 + L2 LINE L2 3158 3272 0 27 0 0 0 chr10 17720301 17720328 -127868960 + AT_rich Low_complexity Low_complexity 1 27 0 255 259 83 19 chr10 17720610 17720718 -127868570 + MER117 DNA MER1_type 9 123 -74 2302 109 3 0 chr10 17721070 17721373 -127867915 - AluSg1 SINE Alu -1 308 5 1692 161 30 18 chr10 17721539 17721868 -127867420 - MER44D DNA MER2_type -6 603 1 21 0 0 0 chr10 17722055 17722076 -127867212 + AT_rich Low_complexity Low_complexity 1 21 0 2810 174 7 6 chr10 17722165 17722710 -127866578 - L1P LINE L1 -1101 5045 4500 1097 95 6 12 chr10 17722712 17722880 -127866408 + L1PA13 LINE L1 5993 6159 -4 193 311 18 113 chr10 17725434 17725656 -127863632 + L2 LINE L2 1335 1535 -1779 699 297 89 34 chr10 17725666 17726491 -127862797 + L2 LINE L2 1798 3313 0 379 371 81 37 chr10 17726498 17726932 -127862356 + L2 LINE L2 2442 2894 -420 212 248 29 67 chr10 17727073 17727110 -127862178 + L2 LINE L2 3116 3153 -160 1810 181 41 0 chr10 17727110 17727403 -127861885 - AluJb SINE Alu -7 305 1 212 248 29 67 chr10 17727403 17727470 -127861818 + L2 LINE L2 3153 3216 -97 1865 167 10 0 chr10 17728055 17728349 -127860939 + AluSx SINE Alu 1 297 -15 180 0 0 0 chr10 17728913 17728933 -127860355 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 276 329 99 26 chr10 17729246 17729398 -127859890 + MIR SINE MIR 57 219 -43 1137 274 147 35 chr10 17730181 17731070 -127858218 - L2 LINE L2 -6 3307 2334 288 0 0 0 chr10 17731075 17731107 -127858181 + (TCTA)n Simple_repeat Simple_repeat 1 32 0 993 153 6 0 chr10 17731115 17731285 -127858003 - L1PB3 LINE L1 -22 6132 5962 224 212 15 0 chr10 17731328 17731394 -127857894 + (TA)n Simple_repeat Simple_repeat 2 68 0 330 228 38 25 chr10 17731583 17731662 -127857626 - MIR SINE MIR -174 88 9 208 216 0 0 chr10 17732347 17732384 -127856904 + polypurine Low_complexity Low_complexity 4 40 0 1842 132 0 4 chr10 17732792 17733064 -127856224 - AluSx SINE Alu -12 300 30 308 270 10 40 chr10 17734394 17734494 -127854794 - MIR3 SINE MIR -1 207 111 637 259 84 38 chr10 17734503 17734742 -127854546 - MIR SINE MIR -7 255 6 2205 103 0 26 chr10 17735236 17735538 -127853750 + AluY SINE Alu 1 294 -17 221 204 0 0 chr10 17735597 17735641 -127853647 + L2 LINE L2 3268 3311 -2 244 328 92 8 chr10 17735894 17736025 -127853263 - MIR SINE MIR -40 222 81 214 226 258 0 chr10 17736558 17736620 -127852668 - MER5A DNA MER1_type -111 78 1 738 191 15 0 chr10 17736854 17736985 -127852303 - FLAM_C SINE Alu 0 133 1 2021 238 53 29 chr10 17737945 17738606 -127850682 - L1M4 LINE L1 -5851 691 15 931 246 116 34 chr10 17738855 17739233 -127850055 + MLT1I LTR MaLR 1 409 0 23 33 0 0 chr10 17739409 17739439 -127849849 + AT_rich Low_complexity Low_complexity 1 30 0 1571 144 78 11 chr10 17739442 17739713 -127849575 - AluJo SINE Alu -21 291 3 2456 87 0 3 chr10 17739859 17740170 -127849118 + AluY SINE Alu 1 310 -1 2004 133 3 17 chr10 17740976 17741277 -127848011 - AluSx SINE Alu -15 297 1 22 0 0 0 chr10 17741628 17741650 -127847638 + AT_rich Low_complexity Low_complexity 1 22 0 34 42 0 0 chr10 17742854 17742902 -127846386 + AT_rich Low_complexity Low_complexity 1 48 0 186 287 39 94 chr10 17744684 17744970 -127844318 - L2 LINE L2 -79 3234 2965 1426 232 45 51 chr10 17745382 17745822 -127843466 + L1ME LINE L1 4749 5190 -972 1784 155 18 3 chr10 17745822 17746106 -127843182 + AluJb SINE Alu 1 288 -24 1426 232 45 51 chr10 17746106 17746604 -127842684 + L1ME LINE L1 5190 5675 -487 1898 162 29 2 chr10 17746609 17747022 -127842266 + L1M3 LINE L1 5257 5680 -500 694 99 28 21 chr10 17747045 17747186 -127842102 + GA-rich Low_complexity Low_complexity 4 145 0 278 216 68 0 chr10 17747931 17748005 -127841283 + MER5A DNA MER1_type 29 107 -82 314 180 16 0 chr10 17749599 17749660 -127839628 + L2 LINE L2 3252 3313 0 2154 138 3 0 chr10 17749746 17750057 -127839231 + AluSx SINE Alu 1 312 0 2244 118 3 0 chr10 17750751 17751055 -127838233 - AluSx SINE Alu -7 305 1 2222 110 0 0 chr10 17752193 17752485 -127836803 + AluSg SINE Alu 5 296 -14 805 270 53 31 chr10 17753207 17753433 -127835855 + MIR SINE MIR 5 235 -27 317 305 57 9 chr10 17753527 17753632 -127835656 - L2 LINE L2 -20 3293 3184 344 39 0 20 chr10 17753695 17753746 -127835542 + (TG)n Simple_repeat Simple_repeat 2 51 0 180 77 0 0 chr10 17753834 17753860 -127835428 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 296 336 50 8 chr10 17753868 17753987 -127835301 + L3b LINE CR1 1296 1419 -164 1922 73 36 0 chr10 17754443 17754718 -127834570 + L1MA2 LINE L1 6018 6302 -2 32 26 0 0 chr10 17754719 17754758 -127834530 + AT_rich Low_complexity Low_complexity 1 39 0 235 325 17 43 chr10 17755602 17755719 -127833569 - MIR3 SINE MIR -29 179 66 1483 140 21 0 chr10 17757873 17758108 -127831180 + AluJb SINE Alu 40 279 -33 272 247 12 0 chr10 17758108 17758193 -127831095 + GA-rich Low_complexity Low_complexity 2 87 0 2291 99 0 13 chr10 17759351 17759663 -127829625 + AluSx SINE Alu 3 310 -2 539 262 133 14 chr10 17759908 17760118 -127829170 - MIR SINE MIR 0 262 28 31 44 0 0 chr10 17760558 17760603 -127828685 + AT_rich Low_complexity Low_complexity 1 45 0 2733 172 0 25 chr10 17761140 17761704 -127827584 - L1MA6 LINE L1 0 6300 5751 2055 144 66 3 chr10 17761718 17762099 -127827189 + L1MA6 LINE L1 5350 5754 -546 1472 132 0 18 chr10 17762578 17762797 -127826491 + AluSg/x SINE Alu 77 291 -19 516 104 0 0 chr10 17763264 17763331 -127825957 - Alu SINE Alu -242 67 2 887 142 14 0 chr10 17763333 17763474 -127825814 - FRAM SINE Alu -14 162 20 291 257 88 26 chr10 17765119 17765232 -127824056 + MIR3 SINE MIR 41 160 -48 351 259 9 18 chr10 17765321 17765433 -127823855 + MER103 DNA DNA 55 165 -1 319 179 0 18 chr10 17765706 17765762 -127823526 + AluSc SINE Alu 40 94 -205 255 316 40 0 chr10 17766306 17766382 -127822906 - MIR SINE MIR -100 108 30 637 213 8 24 chr10 17767058 17767185 -127822103 + AluSq/x SINE Alu 6 130 -183 295 152 15 15 chr10 17769737 17769803 -127819485 + GA-rich Low_complexity Low_complexity 2 67 0 237 270 178 18 chr10 17770814 17770977 -127818311 + L2 LINE L2 3001 3189 -124 928 185 0 34 chr10 17772628 17772833 -127816455 - AluJb SINE Alu -29 283 86 276 316 53 0 chr10 17773551 17773646 -127815642 + MIR SINE MIR 40 139 -123 180 350 17 0 chr10 17773919 17773979 -127815309 - L2 LINE L2 -76 3196 3136 21 0 0 0 chr10 17776480 17776501 -127812787 + AT_rich Low_complexity Low_complexity 1 21 0 1150 212 3 62 chr10 17776882 17777188 -127812100 - AluJb SINE Alu -5 307 20 342 0 0 0 chr10 17777719 17777757 -127811531 + (TAAA)n Simple_repeat Simple_repeat 1 38 0 2213 98 3 13 chr10 17779521 17779826 -127809462 - AluY SINE Alu -9 302 1 2213 113 0 3 chr10 17779833 17780135 -127809153 - AluSq SINE Alu -12 301 1 261 139 0 0 chr10 17780693 17780736 -127808552 + (T)n Simple_repeat Simple_repeat 1 43 0 564 294 87 14 chr10 17781815 17782033 -127807255 + MIR SINE MIR 2 235 -27 1762 125 10 14 chr10 17782232 17782527 -127806761 + AluSp SINE Alu 1 294 -19 227 349 33 40 chr10 17784134 17784286 -127805002 - MIR SINE MIR -55 207 57 1215 143 0 0 chr10 17785506 17785681 -127803607 - AluSp SINE Alu -11 302 128 330 167 131 24 chr10 17786392 17786476 -127802812 - MIR3 SINE MIR -52 156 64 228 220 60 0 chr10 17787059 17787109 -127802179 + L3b LINE CR1 1282 1334 -249 2888 86 11 6 chr10 17787581 17787943 -127801345 + THE1B LTR MaLR 1 364 0 1536 134 28 146 chr10 17787944 17788368 -127800920 + THE1B-int LTR MaLR 2 375 -1205 478 255 52 68 chr10 17788869 17789061 -127800227 + L2 LINE L2 3123 3311 -2 370 243 87 0 chr10 17789597 17789700 -127799588 + L1ME LINE L1 5547 5658 -463 377 318 87 11 chr10 17789998 17790275 -127799013 - HAL1b LINE L1 -659 689 392 218 297 8 51 chr10 17790276 17790394 -127798894 + CT-rich Low_complexity Low_complexity 2 114 0 * 230 251 0 37 chr10 17790309 17790476 -127798812 + CT-rich Low_complexity Low_complexity 1 160 0 208 392 0 0 chr10 17790488 17790562 -127798726 + polypyrimidine Low_complexity Low_complexity 1 74 0 194 247 13 0 chr10 17790579 17790656 -127798632 + CT-rich Low_complexity Low_complexity 3 80 0 227 321 43 70 chr10 17791422 17791609 -127797679 + L2 LINE L2 3080 3261 -11 24 32 0 0 chr10 17792183 17792214 -127797074 + AT_rich Low_complexity Low_complexity 1 31 0 1254 219 38 22 chr10 17795729 17796048 -127793240 - L1MB8 LINE L1 -6 6172 5849 2001 138 6 6 chr10 17797667 17797979 -127791309 + AluSx SINE Alu 1 312 0 858 218 38 41 chr10 17798303 17798596 -127790692 + L1M4 LINE L1 4143 4434 -1712 319 300 22 67 chr10 17799238 17799418 -127789870 - L2 LINE L2 -200 3072 2901 213 226 16 16 chr10 17800370 17800432 -127788856 + C-rich Low_complexity Low_complexity 3 64 0 9847 46 0 2 chr10 17800638 17801874 -127787414 - L1P LINE L1 -2172 3974 2742 447 222 89 22 chr10 17802320 17802455 -127786833 + MER103 DNA DNA 11 154 -12 293 295 90 0 chr10 17802557 17802679 -127786609 - L3 LINE CR1 -723 854 722 385 276 6 49 chr10 17804640 17804803 -127784485 + L1M4 LINE L1 4903 5058 -1088 12663 54 7 0 chr10 17807685 17809302 -127779986 - L1P LINE L1 -3663 2483 855 255 150 0 0 chr10 17859353 17859393 -127729895 - Alu SINE Alu -261 41 2 757 158 33 0 chr10 17859611 17859731 -127729557 - AluJb SINE Alu -13 299 176 276 163 0 0 chr10 17859750 17859799 -127729489 - AluSc SINE Alu -81 218 170 276 163 0 0 chr10 17859782 17859831 -127729457 - AluSp/q SINE Alu -83 220 172 276 163 0 0 chr10 17859814 17859863 -127729425 - AluSg/x SINE Alu -82 218 170 276 163 0 0 chr10 17859846 17859895 -127729393 - AluSg/x SINE Alu -82 218 170 276 163 0 0 chr10 17859878 17859927 -127729361 - AluSg/x SINE Alu -82 220 172 879 198 23 23 chr10 17859943 17860160 -127729128 - AluJb SINE Alu -93 219 3 333 236 79 0 chr10 17860244 17860371 -127728917 - AluSc SINE Alu 0 299 163 989 179 40 20 chr10 17860485 17860686 -127728602 + AluSc SINE Alu 103 307 -2 1102 62 17 22 chr10 17860692 17860871 -127728417 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 548 256 6 67 chr10 17860919 17861083 -127728205 + MIR SINE MIR 2 155 -107 23 0 0 0 chr10 17862041 17862064 -127727224 + AT_rich Low_complexity Low_complexity 1 23 0 1119 179 44 28 chr10 17862544 17862796 -127726492 - AluJb SINE Alu -15 297 42 738 167 8 16 chr10 17863477 17863603 -127725685 + FLAM_C SINE Alu 2 126 -17 250 308 132 33 chr10 17864464 17864646 -127724642 + MIR SINE MIR 57 256 -6 1120 274 147 35 chr10 17865399 17866288 -127723000 - L2 LINE L2 -6 3307 2334 324 0 0 0 chr10 17866293 17866329 -127722959 + (TCTA)n Simple_repeat Simple_repeat 1 36 0 1089 147 6 0 chr10 17866337 17866507 -127722781 - L1PB3 LINE L1 -22 6132 5962 224 212 15 0 chr10 17866550 17866616 -127722672 + (TA)n Simple_repeat Simple_repeat 1 67 0 326 228 38 25 chr10 17866805 17866884 -127722404 - MIR SINE MIR -174 88 9 208 216 0 0 chr10 17867569 17867606 -127721682 + polypurine Low_complexity Low_complexity 4 40 0 1791 138 0 4 chr10 17868016 17868285 -127721003 - AluSx SINE Alu -15 297 30 307 270 10 40 chr10 17869617 17869717 -127719571 - MIR3 SINE MIR -1 207 111 574 264 84 38 chr10 17869726 17869965 -127719323 - MIR SINE MIR -7 255 6 2174 106 0 26 chr10 17870459 17870761 -127718527 + AluY SINE Alu 1 294 -17 217 204 0 0 chr10 17870820 17870864 -127718424 + L2 LINE L2 3268 3311 -2 234 319 106 0 chr10 17871135 17871248 -127718040 - MIR SINE MIR -57 205 81 214 226 258 0 chr10 17871781 17871843 -127717445 - MER5A DNA MER1_type -111 78 1 790 191 15 0 chr10 17872077 17872208 -127717080 - FLAM_C SINE Alu 0 133 1 2247 241 53 29 chr10 17873168 17873829 -127715459 - L1M4 LINE L1 -5851 691 15 1081 246 116 34 chr10 17874078 17874456 -127714832 + MLT1I LTR MaLR 1 409 0 23 33 0 0 chr10 17874632 17874662 -127714626 + AT_rich Low_complexity Low_complexity 1 30 0 1563 144 78 11 chr10 17874665 17874936 -127714352 - AluJo SINE Alu -21 291 3 2458 87 0 3 chr10 17875082 17875393 -127713895 + AluY SINE Alu 1 310 -1 1996 133 3 17 chr10 17876200 17876501 -127712787 - AluSx SINE Alu -15 297 1 22 0 0 0 chr10 17876852 17876874 -127712414 + AT_rich Low_complexity Low_complexity 1 22 0 34 42 0 0 chr10 17878078 17878126 -127711162 + AT_rich Low_complexity Low_complexity 1 48 0 1679 232 45 51 chr10 17880606 17881046 -127708242 + L1ME LINE L1 4749 5190 -972 1770 155 18 3 chr10 17881046 17881330 -127707958 + AluJb SINE Alu 1 288 -24 1679 232 45 51 chr10 17881330 17881828 -127707460 + L1ME LINE L1 5190 5675 -487 2080 162 29 2 chr10 17881833 17882246 -127707042 + L1M3 LINE L1 5257 5680 -500 350 41 0 20 chr10 17882269 17882318 -127706970 + (GGGAA)n Simple_repeat Simple_repeat 4 51 0 466 111 60 17 chr10 17882524 17882641 -127706647 + GA-rich Low_complexity Low_complexity 4 125 0 281 216 68 0 chr10 17883386 17883460 -127705828 + MER5A DNA MER1_type 29 107 -82 310 180 16 0 chr10 17885054 17885115 -127704173 + L2 LINE L2 3252 3313 0 2139 138 3 0 chr10 17885201 17885512 -127703776 + AluSx SINE Alu 1 312 0 2238 118 3 0 chr10 17886206 17886510 -127702778 - AluSx SINE Alu -7 305 1 2221 110 0 0 chr10 17887648 17887940 -127701348 + AluSg SINE Alu 5 296 -14 810 270 53 31 chr10 17888662 17888888 -127700400 + MIR SINE MIR 5 235 -27 316 305 57 9 chr10 17888982 17889087 -127700201 - L2 LINE L2 -20 3293 3184 344 39 0 20 chr10 17889150 17889201 -127700087 + (TG)n Simple_repeat Simple_repeat 2 51 0 180 77 0 0 chr10 17889289 17889315 -127699973 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 292 336 50 8 chr10 17889323 17889442 -127699846 + L3b LINE CR1 1296 1419 -164 2079 73 36 0 chr10 17889898 17890173 -127699115 + L1MA2 LINE L1 6018 6302 -2 32 26 0 0 chr10 17890174 17890213 -127699075 + AT_rich Low_complexity Low_complexity 1 39 0 220 325 17 43 chr10 17891057 17891174 -127698114 - MIR3 SINE MIR -29 179 66 1483 140 21 0 chr10 17893328 17893563 -127695725 + AluJb SINE Alu 40 279 -33 272 247 12 0 chr10 17893563 17893648 -127695640 + GA-rich Low_complexity Low_complexity 2 87 0 2286 99 0 13 chr10 17894806 17895118 -127694170 + AluSx SINE Alu 3 310 -2 537 262 133 14 chr10 17895363 17895573 -127693715 - MIR SINE MIR 0 262 28 31 44 0 0 chr10 17896013 17896058 -127693230 + AT_rich Low_complexity Low_complexity 1 45 0 3009 172 0 25 chr10 17896595 17897159 -127692129 - L1MA6 LINE L1 0 6300 5751 2241 144 66 3 chr10 17897173 17897554 -127691734 + L1MA6 LINE L1 5350 5754 -546 1461 132 0 18 chr10 17898033 17898252 -127691036 + AluSg/x SINE Alu 79 293 -19 886 237 111 76 chr10 17898529 17898909 -127690379 - MSTD LTR MaLR -3 393 1 2252 108 7 0 chr10 17899069 17899366 -127689922 + AluSp SINE Alu 7 305 -8 2277 119 0 0 chr10 17899925 17900227 -127689061 + AluSx SINE Alu 1 302 -10 255 137 98 0 chr10 17900284 17900335 -127688953 + L2 LINE L2 3217 3272 0 1699 154 32 4 chr10 17900802 17901081 -127688207 - AluJo SINE Alu -25 287 1 2566 49 0 3 chr10 17901421 17901727 -127687561 - AluY SINE Alu -6 305 1 350 283 83 14 chr10 17901834 17901979 -127687309 + MIR SINE MIR 100 254 -8 650 210 90 93 chr10 17902174 17902620 -127686668 + MLT1F1 LTR MaLR 2 537 -30 250 245 21 64 chr10 17902717 17902811 -127686477 + MIR SINE MIR 118 207 -55 2173 118 30 3 chr10 17902898 17903202 -127686086 - AluSx SINE Alu 0 312 1 386 307 63 47 chr10 17903211 17903573 -127685715 + L1MC4a LINE L1 5582 5952 -212 352 267 70 60 chr10 17903913 17904327 -127684961 + L1ME4a LINE L1 5643 6097 -24 272 383 67 28 chr10 17904554 17905014 -127684274 + L2 LINE L2 2233 2710 -604 22 35 0 0 chr10 17905279 17905308 -127683980 + AT_rich Low_complexity Low_complexity 1 29 0 266 276 48 9 chr10 17905570 17905675 -127683613 - MIR SINE MIR -119 143 35 2110 138 0 0 chr10 17906169 17906459 -127682829 - AluSx SINE Alu -17 295 6 855 194 5 0 chr10 17907373 17907761 -127681527 + GA-rich Low_complexity Low_complexity 1 390 0 2265 103 0 0 chr10 17909078 17909369 -127679919 - AluSc SINE Alu -18 291 1 2218 100 0 35 chr10 17909999 17910309 -127678979 + AluSq SINE Alu 1 299 -14 31 0 0 0 chr10 17910515 17910546 -127678742 + AT_rich Low_complexity Low_complexity 1 31 0 195 323 42 31 chr10 17910555 17910651 -127678637 + MIR3 SINE MIR 107 203 -5 460 306 124 39 chr10 17911512 17912075 -127677213 + L2 LINE L2 1682 2292 -1022 1680 156 57 7 chr10 17912160 17912442 -127676846 - AluJb SINE Alu -16 296 1 293 143 0 0 chr10 17914391 17914433 -127674855 - LTR7 LTR ERV1 -408 42 1 182 261 60 97 chr10 17915820 17915954 -127673334 - L2 LINE L2 -1788 1526 1398 515 300 78 40 chr10 17916087 17916434 -127672854 + L1ME4a LINE L1 5302 5661 -460 304 269 81 94 chr10 17916564 17916798 -127672490 + L1ME4a LINE L1 5869 6099 -22 939 92 0 0 chr10 17916811 17916931 -127672357 + L1MA2 LINE L1 6185 6304 0 931 180 87 0 chr10 17918148 17918320 -127670968 + MER5A DNA MER1_type 1 187 -2 4978 68 224 0 chr10 17918320 17918995 -127670293 + LTR12 LTR ERV1 1 826 0 35684 89 29 6 chr10 17919019 17923823 -127665465 + HERV9 LTR ERV1 58 4974 -3425 2118 177 91 77 chr10 17923792 17924717 -127664571 + Harlequin LTR ERV1 842 1720 -5176 * 4714 93 1 15 chr10 17924711 17925364 -127663924 + Harlequin LTR ERV1 7756 8399 0 5928 70 110 0 chr10 17925364 17926108 -127663180 + LTR12 LTR ERV1 1 826 0 210 37 0 0 chr10 17926629 17926656 -127662632 + (TTTA)n Simple_repeat Simple_repeat 4 30 0 1635 201 7 0 chr10 17926658 17926937 -127662351 - AluJo SINE Alu -31 281 1 453 193 23 0 chr10 17927208 17927296 -127661992 - MER5A DNA MER1_type -96 93 4 612 262 12 24 chr10 17927521 17927689 -127661599 - MER5B DNA MER1_type -5 173 8 654 305 47 60 chr10 17928371 17928751 -127660537 - L2 LINE L2 0 3272 2898 315 0 0 0 chr10 17928832 17928867 -127660421 + (CA)n Simple_repeat Simple_repeat 1 35 0 257 0 30 0 chr10 17928928 17928961 -127660327 + (CA)n Simple_repeat Simple_repeat 2 35 0 298 0 48 0 chr10 17929023 17929065 -127660223 + (CA)n Simple_repeat Simple_repeat 2 45 0 1581 196 18 0 chr10 17929136 17929417 -127659871 - AluJb SINE Alu -20 292 7 392 347 99 55 chr10 17931067 17931126 -127658162 - L2 LINE L2 -1 3271 3216 2283 132 35 51 chr10 17931126 17931521 -127657767 - MLT1B LTR MaLR -1 389 1 392 347 99 55 chr10 17931521 17931804 -127657484 - L2 LINE L2 -56 3216 2914 865 205 62 22 chr10 17931832 17932056 -127657232 + MER106A DNA MER1_type 3 235 -1 313 366 113 30 chr10 17932057 17932339 -127656949 - L2 LINE L2 -452 2862 2605 1924 134 39 0 chr10 17932339 17932622 -127656666 + AluSg SINE Alu 1 294 -16 313 366 113 30 chr10 17932622 17932965 -127656323 - L2 LINE L2 -709 2605 2185 5207 95 1 36 chr10 17935708 17936421 -127652867 + LTR12 LTR ERV1 1 688 0 324 314 24 77 chr10 17936431 17936600 -127652688 - MIR SINE MIR -79 183 24 1724 214 55 9 chr10 17938706 17939145 -127650143 - MLT1C LTR MaLR -3 464 6 2220 108 0 3 chr10 17939847 17940143 -127649145 - AluSc SINE Alu -14 295 1 250 299 76 22 chr10 17941283 17941447 -127647841 + MIR SINE MIR 34 201 -61 21 36 0 0 chr10 17941450 17941478 -127647810 + AT_rich Low_complexity Low_complexity 1 28 0 850 143 30 30 chr10 17941667 17941800 -127647488 + FLAM_C SINE Alu 1 133 0 225 329 155 12 chr10 17941813 17941974 -127647314 - MIR SINE MIR -3 259 76 2127 135 0 3 chr10 17942186 17942489 -127646799 - AluSx SINE Alu -10 302 1 1009 178 11 11 chr10 17942936 17943127 -127646161 - AluJo SINE Alu -121 191 1 1856 139 0 0 chr10 17944361 17944628 -127644660 - AluSx SINE Alu -45 267 1 6618 164 37 18 chr10 17945272 17945829 -127643459 - LTR57-int LTR ERVL -4110 1233 688 201 94 0 0 chr10 17945829 17945861 -127643427 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 6618 164 37 18 chr10 17945861 17946513 -127642775 - LTR57-int LTR ERVL -4655 688 1 847 192 24 6 chr10 17946513 17946680 -127642608 - LTR57 LTR ERVL 0 411 242 354 97 0 125 chr10 17946695 17946767 -127642521 - LTR57 LTR ERVL -348 63 1 * 1383 251 35 35 chr10 17946767 17947136 -127642152 - MER45B DNA AcHobo -352 688 320 537 176 64 40 chr10 17947136 17947261 -127642027 + MLT1A2 LTR MaLR 1 128 -246 1899 151 6 22 chr10 17948570 17948882 -127640406 - AluJb SINE Alu -5 307 1 484 370 19 0 chr10 17949438 17949646 -127639642 + MIR SINE MIR 33 244 -18 2089 118 10 7 chr10 17950427 17950731 -127638557 + AluSx SINE Alu 1 305 -7 288 286 166 29 chr10 17951261 17951569 -127637719 + L1ME4a LINE L1 5661 6010 -111 22 30 0 61 chr10 17951934 17951982 -127637306 + AT_rich Low_complexity Low_complexity 1 46 -16 632 103 10 0 chr10 17951982 17952079 -127637209 + L1MA2 LINE L1 6207 6304 0 22 30 0 61 chr10 17952079 17952096 -127637192 + AT_rich Low_complexity Low_complexity 46 62 0 333 0 0 0 chr10 17952303 17952340 -127636948 + (TTA)n Simple_repeat Simple_repeat 3 39 0 2122 132 0 0 chr10 17952516 17952827 -127636461 + AluSx SINE Alu 2 312 0 2582 117 10 18 chr10 17954051 17954437 -127634851 + MER1A DNA MER1_type 147 529 0 364 266 166 0 chr10 17954489 17954628 -127634660 - MIR SINE MIR -4 258 97 2113 117 0 0 chr10 17954713 17955018 -127634270 + AluSx SINE Alu 1 305 0 581 228 169 22 chr10 17955399 17955583 -127633705 - MIR SINE MIR 0 262 52 411 246 140 3 chr10 17956366 17956494 -127632794 - MIR SINE MIR -62 146 12 220 287 180 43 chr10 17956958 17957331 -127631957 + L2 LINE L2 2465 2888 -426 315 243 88 88 chr10 17958617 17958753 -127630535 - MER5B DNA MER1_type -36 153 4 2113 113 24 71 chr10 17959724 17960105 -127629183 + L1PA12 LINE L1 5806 6168 0 413 357 80 4 chr10 17960670 17960919 -127628369 + L3 LINE CR1 143 410 -1167 440 274 91 17 chr10 17960996 17961171 -127628117 + MIR SINE MIR 15 202 -60 450 346 179 16 chr10 17961292 17961801 -127627487 + L3 LINE CR1 634 1225 -352 1078 150 0 0 chr10 17962019 17962179 -127627109 - AluSg/x SINE Alu -16 294 135 327 195 102 59 chr10 17963436 17963554 -127625734 - L2 LINE L2 -4 3268 3146 22 0 0 0 chr10 17965366 17965388 -127623900 + AT_rich Low_complexity Low_complexity 1 22 0 248 208 0 0 chr10 17965428 17965476 -127623812 - L1MC4 LINE L1 -1339 6703 6656 423 308 126 28 chr10 17967147 17967329 -127621959 - MIR3 SINE MIR -7 201 2 208 127 36 0 chr10 17968146 17968201 -127621087 + (TA)n Simple_repeat Simple_repeat 1 57 0 307 177 40 17 chr10 17968220 17968395 -127620893 + (TA)n Simple_repeat Simple_repeat 1 179 0 1955 122 0 78 chr10 17969430 17969765 -127619523 - AluSx SINE Alu -3 309 1 426 304 109 14 chr10 17972119 17972339 -127616949 + MIR SINE MIR 19 259 -3 1130 171 0 0 chr10 17972553 17972740 -127616548 - AluSg/x SINE Alu -8 302 116 180 0 0 0 chr10 17972852 17972872 -127616416 + (TAA)n Simple_repeat Simple_repeat 2 21 0 200 314 14 0 chr10 17973179 17973249 -127616039 + GA-rich Low_complexity Low_complexity 1 71 0 198 375 156 0 chr10 17973952 17974080 -127615208 + L2 LINE L2 3116 3263 -9 448 346 53 14 chr10 17974350 17974633 -127614655 + L1ME2 LINE L1 134 427 -5969 2257 104 0 3 chr10 17975159 17975458 -127613830 + AluSc SINE Alu 1 298 -11 7773 248 74 62 chr10 17975503 17976554 -127612734 + L1ME2 LINE L1 790 1828 -4403 2318 92 0 13 chr10 17976554 17976868 -127612420 + AluSx SINE Alu 1 310 -2 7773 248 74 62 chr10 17976868 17978131 -127611157 + L1ME2 LINE L1 1828 3075 -3156 2314 91 7 0 chr10 17978131 17978428 -127610860 + AluSq SINE Alu 1 299 -14 7773 248 74 62 chr10 17978428 17980409 -127608879 + L1ME2 LINE L1 3075 5146 -1085 2396 59 3 0 chr10 17980409 17980699 -127608589 + AluY SINE Alu 1 291 -20 7773 248 74 62 chr10 17980699 17981139 -127608149 + L1ME2 LINE L1 5146 5579 -652 1638 213 130 0 chr10 17981150 17981550 -127607738 - MER66A LTR ERV1 0 478 27 1949 238 21 37 chr10 17981574 17981921 -127607367 + L1ME2 LINE L1 5609 5945 -288 2275 79 7 3 chr10 17981921 17982213 -127607075 + AluSg SINE Alu 1 293 -17 1949 238 21 37 chr10 17982213 17982433 -127606855 + L1ME2 LINE L1 5945 6167 -66 2269 98 13 0 chr10 17984194 17984501 -127604787 - AluSp SINE Alu -2 311 1 2164 117 7 0 chr10 17984849 17985157 -127604131 + AluSq SINE Alu 1 310 -3 186 304 22 0 chr10 17985199 17985245 -127604043 - MIR SINE MIR -127 81 35 326 211 18 83 chr10 17985426 17985535 -127603753 + MER5A DNA MER1_type 83 184 -5 575 223 105 46 chr10 17986099 17986337 -127602951 + MER112 DNA MER1_type 9 260 0 481 268 0 18 chr10 17987904 17988016 -127601272 - MIR3 SINE MIR -11 197 88 542 219 55 134 chr10 17989094 17989423 -127599865 - L1MC4 LINE L1 0 8042 7740 652 182 28 35 chr10 17990101 17990244 -127599044 + MIR SINE MIR 100 241 -21 588 266 23 12 chr10 17990884 17991057 -127598231 + L1ME LINE L1 20 194 -6202 * 1930 244 48 26 chr10 17991047 17991737 -127597551 + L1ME LINE L1 663 1367 -5029 601 258 56 48 chr10 17991724 17991976 -127597312 + L1ME1 LINE L1 5850 6103 -63 * 3074 163 14 64 chr10 17992961 17993613 -127595675 - L1MB8 LINE L1 -109 6069 5451 1862 173 7 13 chr10 17993616 17993922 -127595366 - AluJb SINE Alu -8 304 1 5767 213 25 14 chr10 17993953 17995402 -127593886 - L1MB8 LINE L1 -983 5163 3700 209 226 0 19 chr10 17996447 17996500 -127592788 + A-rich Low_complexity Low_complexity 2 53 0 301 233 0 0 chr10 17996532 17996592 -127592696 + AluJ/FLAM SINE Alu 1 60 -242 377 249 63 91 chr10 17996653 17996874 -127592414 + L1ME LINE L1 3165 3379 -2836 233 281 111 46 chr10 17997053 17997441 -127591847 + L1ME LINE L1 3574 3986 -2229 2425 83 3 0 chr10 17997525 17997826 -127591462 - AluSp SINE Alu -11 302 1 309 267 86 76 chr10 17997840 17997945 -127591343 + MIR SINE MIR 5 110 -152 212 267 188 10 chr10 17998170 17998271 -127591017 - L2 LINE L2 0 3272 3154 1286 236 184 38 chr10 17998345 17998976 -127590312 + MER20B DNA MER1_type 1 723 -60 263 333 35 44 chr10 17999021 17999135 -127590153 - L2 LINE L2 -194 3078 2966 376 241 117 29 chr10 17999139 17999154 -127590134 + L1ME LINE L1 5514 5526 -664 2403 110 0 0 chr10 17999154 17999464 -127589824 - AluSx SINE Alu -2 310 1 376 241 117 29 chr10 17999464 17999585 -127589703 + L1ME LINE L1 5526 5662 -528 420 301 43 0 chr10 17999589 17999775 -127589513 + L1ME LINE L1 5698 5891 -299 458 247 86 84 chr10 18000628 18001006 -127588282 + MLT1I LTR MaLR 27 378 -31 255 61 0 0 chr10 18002151 18002184 -127587104 + (CAT)n Simple_repeat Simple_repeat 1 33 0 199 392 98 0 chr10 18002235 18002378 -127586910 + L2 LINE L2 2738 2894 -420 209 343 27 0 chr10 18002672 18002745 -127586543 + L2 LINE L2 3239 3313 0 234 221 132 0 chr10 18002776 18002844 -127586444 - MIR SINE MIR -105 157 81 2202 119 0 10 chr10 18003316 18003619 -127585669 - AluSx SINE Alu -12 300 1 240 209 0 0 chr10 18005874 18005917 -127583371 + MIR SINE MIR 105 147 -61 21 57 0 0 chr10 18005977 18006012 -127583276 + AT_rich Low_complexity Low_complexity 1 35 0 186 376 64 18 chr10 18006303 18006412 -127582876 - MIR SINE MIR -65 143 30 601 288 126 0 chr10 18006842 18007040 -127582248 + MIR SINE MIR 37 259 -3 185 288 17 0 chr10 18007058 18007117 -127582171 + MIR SINE MIR 203 262 0 21 57 0 0 chr10 18007146 18007181 -127582107 + AT_rich Low_complexity Low_complexity 1 35 0 2152 112 3 0 chr10 18007304 18007589 -127581699 + AluSp SINE Alu 1 286 -27 294 50 0 0 chr10 18007589 18007629 -127581659 + (CATA)n Simple_repeat Simple_repeat 2 41 0 226 224 60 15 chr10 18008065 18008132 -127581156 + MIR SINE MIR 69 138 -70 252 234 62 16 chr10 18008223 18008287 -127581001 - MER5A DNA MER1_type -120 69 3 2414 84 0 0 chr10 18010046 18010344 -127578944 - AluSc SINE Alu -11 298 1 2239 109 3 0 chr10 18011544 18011855 -127577433 - AluSx SINE Alu 0 312 1 1325 278 26 11 chr10 18013491 18013923 -127575365 + L1MC5 LINE L1 5297 5737 -597 1254 169 65 26 chr10 18013925 18014156 -127575132 + AluJb SINE Alu 3 242 -70 840 290 95 35 chr10 18014198 18015265 -127574023 + L1MC5 LINE L1 5721 6831 -977 575 263 11 60 chr10 18015418 18015703 -127573585 + L1MC5 LINE L1 6963 7233 -728 313 269 147 0 chr10 18015824 18015980 -127573308 + L1MC5 LINE L1 7292 7470 -491 1012 129 7 0 chr10 18015988 18016143 -127573145 + MER41B LTR ERV1 480 635 0 481 169 22 0 chr10 18016143 18016232 -127573056 + MER41B-int LTR ERV1 1 91 -5855 * 1461 114 38 0 chr10 18016228 18016438 -127572850 + MER41B-int LTR ERV1 5729 5946 0 3613 134 0 2 chr10 18016441 18016986 -127572302 + MER41B LTR ERV1 4 547 -88 262 260 21 31 chr10 18017622 18017718 -127571570 + L1ME LINE L1 658 752 -5453 1157 274 61 31 chr10 18017915 18018525 -127570763 + L1ME LINE L1 1121 1748 -4648 3837 159 45 46 chr10 18018542 18019454 -127569834 + L1MA9 LINE L1 4204 5114 -1032 5291 134 28 52 chr10 18019458 18020533 -127568755 + L1MA9 LINE L1 5264 6312 0 2094 270 122 17 chr10 18020579 18021942 -127567346 + L1ME LINE L1 2544 4049 -2166 873 304 41 37 chr10 18021973 18022494 -127566794 + MLT1H1 LTR MaLR 32 549 0 1548 257 104 12 chr10 18022513 18023292 -127565996 + L1ME LINE L1 4064 4914 -1301 1927 168 0 9 chr10 18023647 18023962 -127565326 + AluJb SINE Alu 1 312 0 504 287 42 42 chr10 18025808 18026024 -127563264 + MIR SINE MIR 13 228 -34 289 323 19 92 chr10 18026200 18026334 -127562954 + MIR SINE MIR 21 163 -99 1947 151 0 0 chr10 18026334 18026667 -127562621 - AluSx SINE Alu 0 333 1 2144 130 0 34 chr10 18026676 18026998 -127562290 - AluSx SINE Alu -1 311 1 289 323 19 92 chr10 18026998 18027112 -127562176 + MIR SINE MIR 171 261 -1 358 207 47 18 chr10 18028778 18028893 -127560395 + (TA)n Simple_repeat Simple_repeat 2 125 -50 2077 108 21 0 chr10 18028893 18029181 -127560107 - AluSg SINE Alu -16 294 1 358 207 47 18 chr10 18029181 18029234 -127560054 + (TA)n Simple_repeat Simple_repeat 125 175 0 317 265 60 50 chr10 18029793 18029993 -127559295 + Charlie7 DNA MER1_type 59 260 -2352 2231 110 0 0 chr10 18030083 18030375 -127558913 + AluSx SINE Alu 1 292 -20 26 30 0 0 chr10 18030375 18030408 -127558880 + AT_rich Low_complexity Low_complexity 1 33 0 1914 103 22 7 chr10 18030422 18030695 -127558593 + AluSx SINE Alu 23 299 -13 212 209 100 73 chr10 18030696 18030806 -127558482 - MIR SINE MIR -91 171 59 731 267 30 45 chr10 18030872 18031209 -127558079 + Charlie7 DNA MER1_type 310 641 -1971 762 249 126 40 chr10 18031296 18031572 -127557716 + Charlie7 DNA MER1_type 800 1128 -1484 2598 49 0 0 chr10 18031572 18031876 -127557412 - AluY SINE Alu -6 305 2 762 249 126 40 chr10 18031876 18032029 -127557259 + Charlie7 DNA MER1_type 1128 1266 -1346 850 236 33 9 chr10 18032216 18032428 -127556860 - MIR SINE MIR -44 218 2 246 62 0 0 chr10 18032457 18032489 -127556799 + (TG)n Simple_repeat Simple_repeat 2 33 0 570 367 47 13 chr10 18032526 18032973 -127556315 + L1ME LINE L1 4910 5371 -844 332 307 63 24 chr10 18033014 18033219 -127556069 + L1ME LINE L1 5447 5659 -531 277 298 50 8 chr10 18033258 18033379 -127555909 + MLT1J LTR MaLR 5 130 -381 2201 118 17 0 chr10 18034607 18034903 -127554385 - AluSx SINE Alu -11 301 1 283 292 25 25 chr10 18035310 18035430 -127553858 + L1ME LINE L1 5507 5626 -495 2095 114 28 0 chr10 18035722 18036011 -127553277 + AluSx SINE Alu 1 297 -15 22 35 0 0 chr10 18036205 18036234 -127553054 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr10 18036610 18036631 -127552657 + AT_rich Low_complexity Low_complexity 1 21 0 450 253 109 35 chr10 18036860 18037034 -127552254 + MIR SINE MIR 38 224 -38 2218 117 3 0 chr10 18037064 18037373 -127551915 + AluSx SINE Alu 1 310 -2 216 227 0 91 chr10 18037467 18037533 -127551755 + L2 LINE L2 3252 3311 -2 256 330 21 21 chr10 18037739 18037833 -127551455 - MIR SINE MIR -86 122 29 2330 106 0 0 chr10 18039042 18039345 -127549943 + AluSx SINE Alu 1 303 -9 439 139 47 0 chr10 18040958 18041044 -127548244 + MER53 DNA DNA 6 95 -94 1575 87 5 28 chr10 18041446 18041664 -127547624 - AluSx SINE Alu -3 307 95 708 66 0 0 chr10 18041719 18041810 -127547478 - AluSx SINE Alu -221 91 1 267 326 76 0 chr10 18041880 18041972 -127547316 + MIR SINE MIR 31 129 -133 1773 135 29 4 chr10 18042513 18042817 -127546471 - AluSx SINE Alu 0 311 1 2147 105 51 0 chr10 18043458 18043754 -127545534 + AluSq SINE Alu 1 311 -2 3021 28 0 3 chr10 18045426 18045787 -127543501 + L1PA4 LINE L1 5793 6152 -3 191 381 125 6 chr10 18045945 18046105 -127543183 + L3 LINE CR1 67 245 -1332 291 275 64 28 chr10 18046166 18046275 -127543013 - L2 LINE L2 -146 3126 3014 2568 61 0 0 chr10 18048497 18048808 -127540480 - AluY SINE Alu 0 311 1 2094 145 0 0 chr10 18048908 18049212 -127540076 - AluSx SINE Alu -8 304 1 246 232 10 20 chr10 18049264 18049363 -127539925 + (CATATA)n Simple_repeat Simple_repeat 1 98 0 570 151 0 0 chr10 18051235 18051341 -127537947 + CT-rich Low_complexity Low_complexity 1 106 0 1721 153 0 31 chr10 18051341 18051635 -127537653 - AluJo SINE Alu -7 305 21 737 272 62 25 chr10 18052254 18052497 -127536791 + MIR SINE MIR 2 253 -9 1317 155 12 0 chr10 18052831 18053083 -127536205 + L1MA4 LINE L1 5994 6248 -52 27 0 0 0 chr10 18053084 18053111 -127536177 + AT_rich Low_complexity Low_complexity 1 27 0 917 187 14 147 chr10 18054265 18054687 -127534601 + L1 LINE L1 4914 5279 -867 2374 43 0 0 chr10 18055125 18055431 -127533857 + AluY SINE Alu 2 307 0 1167 202 4 4 chr10 18055501 18055744 -127533544 - L1ME1 LINE L1 -269 5897 5655 838 178 43 12 chr10 18055733 18056001 -127533287 - L1ME1 LINE L1 -723 5443 5170 * 960 202 39 53 chr10 18056009 18056291 -127532997 + L1ME1 LINE L1 5885 6162 -4 303 258 374 22 chr10 18057307 18057489 -127531799 + MIR SINE MIR 16 261 -1 2288 71 0 0 chr10 18058049 18058371 -127530917 + AluY SINE Alu 1 322 0 297 75 0 0 chr10 18059033 18059073 -127530215 + (GA)n Simple_repeat Simple_repeat 1 40 0 181 325 134 75 chr10 18059153 18059481 -127529807 - L2 LINE L2 -348 2966 2659 1783 100 0 0 chr10 18059481 18059711 -127529577 - AluSg SINE Alu -31 279 50 181 325 134 75 chr10 18059711 18059856 -127529432 - L2 LINE L2 -655 2659 2524 2301 108 0 22 chr10 18059856 18060170 -127529118 + AluSx SINE Alu 1 307 -5 181 325 134 75 chr10 18060170 18060283 -127529005 - L2 LINE L2 -790 2524 2344 418 230 16 0 chr10 18060401 18060505 -127528783 + MER5A DNA MER1_type 4 109 -80 923 255 117 44 chr10 18060642 18061183 -127528105 - HAL1 LINE L1 -1293 1214 635 2065 96 36 23 chr10 18061630 18061932 -127527356 + AluSx SINE Alu 1 306 -6 2033 130 9 41 chr10 18064118 18064433 -127524855 - AluSg SINE Alu -4 306 2 271 336 67 8 chr10 18064536 18064655 -127524633 - L2 LINE L2 -5 3267 3142 466 194 229 21 chr10 18065094 18065238 -127524050 - L1MDb LINE L1 -4626 1780 1607 2168 113 3 0 chr10 18065238 18065540 -127523748 - AluSc SINE Alu -6 303 1 906 184 3 30 chr10 18065557 18065811 -127523477 - L1MDa LINE L1 -4933 1473 1228 422 110 35 179 chr10 18065806 18065951 -127523337 + L1MDa LINE L1 1457 1580 -4826 * 2338 217 104 25 chr10 18066007 18067059 -127522229 - L1MDb LINE L1 -5187 1219 8 517 170 107 27 chr10 18067305 18067417 -127521871 - L2 LINE L2 0 3313 3193 2025 106 11 7 chr10 18069046 18069328 -127519960 + AluSx SINE Alu 1 283 -29 321 0 25 0 chr10 18069328 18069368 -127519920 + (CAAAA)n Simple_repeat Simple_repeat 2 60 0 1100 147 5 5 chr10 18071458 18071656 -127517632 - L1MB3 LINE L1 0 6183 5986 2014 171 5 13 chr10 18071658 18072043 -127517245 - L1MB3 LINE L1 -295 5888 5507 22 80 0 0 chr10 18072718 18072768 -127516520 + AT_rich Low_complexity Low_complexity 1 50 0 4468 175 34 10 chr10 18073556 18074458 -127514830 - L1MB7 LINE L1 -7 6177 5254 207 100 0 0 chr10 18075076 18075106 -127514182 + (TG)n Simple_repeat Simple_repeat 1 30 0 307 68 23 0 chr10 18075137 18075181 -127514107 - MADE1 DNA Mariner 0 80 36 414 125 111 0 chr10 18075214 18075286 -127514002 - MADE1 DNA Mariner 0 80 1 22 80 0 0 chr10 18075768 18075818 -127513470 + AT_rich Low_complexity Low_complexity 1 50 0 539 305 176 0 chr10 18075865 18076052 -127513236 - MIR SINE MIR -28 234 15 24 77 0 0 chr10 18078603 18078655 -127510633 + AT_rich Low_complexity Low_complexity 1 52 0 2009 99 39 18 chr10 18079018 18079301 -127509987 + AluSx SINE Alu 1 289 -23 2181 126 0 0 chr10 18080314 18080615 -127508673 - AluSx SINE Alu -11 301 1 285 272 204 0 chr10 18080705 18080896 -127508392 + L1MC4a LINE L1 5730 5959 -1849 203 0 0 36 chr10 18083014 18083042 -127506246 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 23 0 0 0 chr10 18083167 18083190 -127506098 + AT_rich Low_complexity Low_complexity 1 23 0 26 30 0 0 chr10 18083613 18083646 -127505642 + AT_rich Low_complexity Low_complexity 1 33 0 21 0 0 0 chr10 18084341 18084362 -127504926 + AT_rich Low_complexity Low_complexity 1 21 0 2344 90 0 7 chr10 18084541 18084851 -127504437 - AluSg1 SINE Alu -1 308 1 192 40 0 0 chr10 18086328 18086353 -127502935 + (A)n Simple_repeat Simple_repeat 1 25 0 980 105 8 0 chr10 18086508 18086641 -127502647 + AluSq/x SINE Alu 3 136 -177 1452 158 0 0 chr10 18086641 18086862 -127502426 + AluSx SINE Alu 1 221 -91 19560 34 2 1 chr10 18087445 18090612 -127498676 + L1PA4 LINE L1 2983 6154 -1 202 289 0 0 chr10 18091192 18091237 -127498051 + L2 LINE L2 3136 3180 -92 499 266 70 0 chr10 18091425 18091553 -127497735 + MIR SINE MIR 55 191 -71 1763 166 3 0 chr10 18092102 18092385 -127496903 + AluJo SINE Alu 1 284 -28 30 0 0 0 chr10 18092385 18092415 -127496873 + AT_rich Low_complexity Low_complexity 1 30 0 2129 119 73 14 chr10 18092552 18092896 -127496392 + THE1B LTR MaLR 1 364 0 210 192 61 131 chr10 18093176 18093275 -127496013 - MIR SINE MIR -78 130 34 244 352 16 0 chr10 18095053 18095178 -127494110 - L1M4 LINE L1 -1988 4158 4032 279 0 0 0 chr10 18095192 18095223 -127494065 + (TG)n Simple_repeat Simple_repeat 2 32 0 1120 235 167 51 chr10 18095223 18095695 -127493593 + MER76 LTR ERV 162 688 0 448 259 0 0 chr10 18095848 18095960 -127493328 - HAL1b LINE L1 -659 689 578 246 328 86 0 chr10 18095966 18096094 -127493194 - HAL1b LINE L1 -1110 238 100 1002 267 73 50 chr10 18096100 18096456 -127492832 + L1ME1 LINE L1 1242 1588 -4808 892 133 0 15 chr10 18096456 18096591 -127492697 + FLAM_C SINE Alu 1 133 0 1002 267 73 50 chr10 18096591 18097074 -127492214 + L1ME1 LINE L1 1588 2100 -4296 1374 226 92 68 chr10 18097185 18097786 -127491502 + L1ME1 LINE L1 5605 6219 -16 2187 102 34 0 chr10 18097849 18098143 -127491145 - AluSg SINE Alu -6 304 1 307 167 30 0 chr10 18099204 18099270 -127490018 - L1MB7 LINE L1 0 6184 6117 1989 141 0 17 chr10 18101255 18101582 -127487706 - AluSx SINE Alu 0 322 1 300 27 0 0 chr10 18101794 18101831 -127487457 + (CA)n Simple_repeat Simple_repeat 2 38 0 2102 146 0 0 chr10 18102475 18102777 -127486511 + AluSx SINE Alu 2 303 -9 25 31 0 0 chr10 18102817 18102849 -127486439 + AT_rich Low_complexity Low_complexity 1 32 0 33 80 0 0 chr10 18103585 18103660 -127485628 + AT_rich Low_complexity Low_complexity 1 75 0 356 326 80 71 chr10 18103674 18104097 -127485191 + L3b LINE CR1 1149 1575 -8 2310 94 7 0 chr10 18104340 18104638 -127484650 + AluSq SINE Alu 2 301 -12 433 314 72 43 chr10 18105110 18105387 -127483901 + MLT1J LTR MaLR 25 309 -202 311 311 37 44 chr10 18105449 18105584 -127483704 + L2 LINE L2 3139 3272 0 856 289 73 74 chr10 18105923 18106488 -127482800 + MLT1K LTR MaLR 2 565 -23 247 265 165 9 chr10 18106947 18107122 -127482166 + L1ME LINE L1 5373 5567 -554 289 282 45 18 chr10 18107377 18107487 -127481801 + HAL1b LINE L1 1227 1339 -9 2186 108 0 3 chr10 18107510 18107796 -127481492 - AluSg SINE Alu -24 286 2 44 35 0 0 chr10 18108486 18108544 -127480744 + AT_rich Low_complexity Low_complexity 1 58 0 610 261 43 0 chr10 18109036 18109197 -127480091 + MIR SINE MIR 38 205 -57 6378 39 22 0 chr10 18109350 18110170 -127479118 + L1PA5 LINE L1 5342 6178 0 411 318 50 31 chr10 18110174 18110295 -127478993 + L1ME4a LINE L1 5530 5647 -474 2277 178 95 28 chr10 18110295 18110768 -127478520 + MLT1D LTR MaLR 1 505 0 411 318 50 31 chr10 18110768 18111005 -127478283 + L1ME4a LINE L1 5647 5895 -226 311 350 19 25 chr10 18111127 18111284 -127478004 + L2 LINE L2 3158 3313 0 22 0 0 0 chr10 18111356 18111378 -127477910 + AT_rich Low_complexity Low_complexity 1 22 0 610 269 32 76 chr10 18111559 18111808 -127477480 - L2 LINE L2 0 3313 3076 28 86 0 0 chr10 18112039 18112109 -127477179 + AT_rich Low_complexity Low_complexity 1 70 0 201 239 45 30 chr10 18112404 18112471 -127476817 - L3 LINE CR1 -64 1513 1446 247 183 164 67 chr10 18112503 18112607 -127476681 - L2 LINE L2 0 3313 3200 1006 280 69 25 chr10 18114893 18115511 -127473777 - L2 LINE L2 -85 3228 2579 581 299 108 20 chr10 18116178 18116429 -127472859 - L2 LINE L2 -705 2609 2337 6440 201 42 9 chr10 18116873 18117162 -127472126 + L1PA16 LINE L1 3879 4157 -2009 2103 96 4 0 chr10 18117162 18117434 -127471854 + AluSx SINE Alu 1 273 -39 6440 201 42 9 chr10 18117434 18118731 -127470557 + L1PA16 LINE L1 4157 5537 -629 2204 112 3 10 chr10 18118731 18119045 -127470243 + AluSq SINE Alu 1 312 -1 6440 201 42 9 chr10 18119045 18119697 -127469591 + L1PA16 LINE L1 5537 6166 0 786 271 105 90 chr10 18120724 18121258 -127468030 + LTR67 LTR ERVL 3 544 -13 4350 167 52 23 chr10 18121658 18121833 -127467455 + L1MB4 LINE L1 5215 5384 -796 2432 84 0 3 chr10 18121833 18122141 -127467147 + AluSq SINE Alu 3 309 -4 4350 167 52 23 chr10 18122141 18122907 -127466381 + L1MB4 LINE L1 5384 6180 0 206 220 45 71 chr10 18123033 18123103 -127466185 + MIR SINE MIR 2 83 -125 413 342 125 20 chr10 18123645 18123949 -127465339 - L2 LINE L2 -437 2877 2542 409 158 49 0 chr10 18124696 18124778 -127464510 + L2 LINE L2 3224 3309 -4 208 232 158 37 chr10 18124906 18124988 -127464300 - MIR SINE MIR -1 261 170 5312 133 34 15 chr10 18126451 18127323 -127461965 - MER4D LTR ERV1 0 903 15 239 284 222 12 chr10 18127698 18127779 -127461509 + MIR SINE MIR 49 146 -62 338 281 240 29 chr10 18129606 18129848 -127459440 - L3 LINE CR1 -7 1570 1278 1073 100 7 0 chr10 18129849 18129989 -127459299 + AluSq/x SINE Alu 1 141 -171 2125 108 7 0 chr10 18129994 18130282 -127459006 + AluSq SINE Alu 1 290 -23 337 294 168 28 chr10 18130320 18130534 -127458754 + MIR SINE MIR 14 257 -5 273 141 8 6 chr10 18131124 18131246 -127458042 + AluSp SINE Alu 121 322 0 671 200 212 0 chr10 18131368 18131538 -127457750 - MER3 DNA MER1_type -3 206 1 2120 128 17 0 chr10 18131871 18132168 -127457120 - AluSx SINE Alu -10 302 1 329 238 19 6 chr10 18133133 18133293 -127455995 + (TA)n Simple_repeat Simple_repeat 1 162 0 207 139 0 0 chr10 18133691 18133727 -127455561 + (CA)n Simple_repeat Simple_repeat 2 37 0 21 0 0 0 chr10 18133967 18133988 -127455300 + AT_rich Low_complexity Low_complexity 1 21 0 1631 153 4 4 chr10 18134978 18135226 -127454062 - AluSx SINE Alu -64 248 1 434 271 0 0 chr10 18136123 18136208 -127453080 + AluJ/FLAM SINE Alu 7 91 -221 297 0 0 0 chr10 18136210 18136243 -127453045 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 1147 133 6 6 chr10 18136250 18136423 -127452865 + FRAM SINE Alu 1 169 -7 477 76 0 0 chr10 18136926 18136992 -127452296 + (GA)n Simple_repeat Simple_repeat 1 66 0 400 296 174 10 chr10 18137536 18137732 -127451556 - MIR SINE MIR -7 255 28 1487 191 21 32 chr10 18137804 18138087 -127451201 - AluJo SINE Alu -22 290 11 22 0 0 0 chr10 18138343 18138365 -127450923 + AT_rich Low_complexity Low_complexity 1 22 0 27 0 0 0 chr10 18138415 18138442 -127450846 + AT_rich Low_complexity Low_complexity 1 27 0 862 192 0 30 chr10 18139161 18139328 -127449960 - MER5A DNA MER1_type -26 163 2 1640 176 14 20 chr10 18140937 18141232 -127448056 + AluJb SINE Alu 4 296 -16 2170 81 7 0 chr10 18141360 18141631 -127447657 - AluSq SINE Alu -28 285 13 614 242 163 19 chr10 18142378 18142593 -127446695 + MIR SINE MIR 5 250 -12 2094 125 17 0 chr10 18142758 18143054 -127446234 + AluSx SINE Alu 1 301 -11 23 0 0 0 chr10 18143647 18143670 -127445618 + AT_rich Low_complexity Low_complexity 1 23 0 3000 109 5 9 chr10 18143932 18144025 -127445263 + L1PA13 LINE L1 5734 5826 -337 2356 87 10 0 chr10 18144025 18144323 -127444965 + AluSx SINE Alu 1 301 -11 3000 109 5 9 chr10 18144323 18144661 -127444627 + L1PA13 LINE L1 5826 6163 0 273 57 0 0 chr10 18144831 18144866 -127444422 + (A)n Simple_repeat Simple_repeat 1 35 0 2347 103 79 0 chr10 18145500 18145829 -127443459 + MER1A DNA MER1_type 175 529 0 2372 104 0 0 chr10 18146004 18146313 -127442975 - AluSc SINE Alu 0 309 1 2950 159 11 0 chr10 18146888 18147346 -127441942 - L1PA16 LINE L1 -5 6161 5699 330 262 58 107 chr10 18147753 18147959 -127441329 + L2 LINE L2 3118 3313 0 264 184 92 40 chr10 18147981 18148057 -127441231 + MIR SINE MIR 175 254 -8 391 208 38 47 chr10 18148118 18148224 -127441064 - L2 LINE L2 -37 3276 3172 1563 152 42 8 chr10 18148257 18148520 -127440768 + AluJo SINE Alu 1 272 -40 243 0 0 0 chr10 18148526 18148553 -127440735 + (TC)n Simple_repeat Simple_repeat 2 28 0 2401 70 0 10 chr10 18148636 18148950 -127440338 + AluY SINE Alu 1 311 0 227 317 61 72 chr10 18149598 18149778 -127439510 + MIR SINE MIR 32 209 -53 1427 155 88 20 chr10 18150568 18150819 -127438469 - AluJb SINE Alu -22 290 23 311 300 53 101 chr10 18153387 18153764 -127435524 + L1M2 LINE L1 778 1136 -5713 883 56 0 0 chr10 18154985 18155092 -127434196 - AluSg/x SINE Alu -14 298 192 2199 120 0 0 chr10 18157036 18157328 -127431960 - AluSx SINE Alu -20 292 1 1996 128 4 0 chr10 18158181 18158495 -127430793 - AluSx SINE Alu 0 315 1 436 322 91 14 chr10 18159507 18159715 -127429573 - MIR SINE MIR -28 234 11 21 36 0 0 chr10 18161954 18161982 -127427306 + AT_rich Low_complexity Low_complexity 1 28 0 853 197 0 0 chr10 18162103 18162240 -127427048 - AluJo SINE Alu -16 296 160 859 155 27 7 chr10 18162301 18162449 -127426839 - AluJo SINE Alu -161 151 1 1825 187 0 0 chr10 18163063 18163362 -127425926 + AluSx SINE Alu 1 299 -13 298 238 0 0 chr10 18163426 18163489 -127425799 - MER94 DNA DNA -11 123 61 21 0 0 0 chr10 18163837 18163858 -127425430 + AT_rich Low_complexity Low_complexity 1 21 0 1828 129 0 0 chr10 18163978 18164233 -127425055 + AluSx SINE Alu 42 296 -16 1078 154 85 0 chr10 18164240 18164428 -127424860 + L1PA16 LINE L1 5958 6161 -5 863 179 20 0 chr10 18165042 18165193 -127424095 + MLT1A1 LTR MaLR 3 156 -209 1647 188 3 11 chr10 18165193 18165514 -127423774 + AluJb SINE Alu 1 319 0 1371 165 18 33 chr10 18165516 18165788 -127423500 + AluJo SINE Alu 21 288 -24 1242 155 24 9 chr10 18165788 18166001 -127423287 + MLT1A1 LTR MaLR 150 365 0 2144 169 15 40 chr10 18166117 18166439 -127422849 - MLT1B LTR MaLR 0 390 78 2179 131 3 0 chr10 18166439 18166737 -127422551 - AluSx SINE Alu -13 299 1 2144 169 15 40 chr10 18166737 18166811 -127422477 - MLT1B LTR MaLR -312 78 4 189 0 0 0 chr10 18166968 18166989 -127422299 + (T)n Simple_repeat Simple_repeat 1 21 0 294 229 135 94 chr10 18167210 18167306 -127421982 - L2 LINE L2 -36 3236 3137 360 289 40 83 chr10 18167680 18167957 -127421331 - L1M4b LINE L1 -5280 1579 1315 216 0 0 0 chr10 18168546 18168570 -127420718 + (TG)n Simple_repeat Simple_repeat 2 25 0 423 162 68 0 chr10 18168608 18168682 -127420606 + Tigger5 DNA MER2_type 1 79 -2244 239 264 0 0 chr10 18168691 18168744 -127420544 + Tigger5 DNA MER2_type 2271 2323 0 * 369 265 162 43 chr10 18168742 18168927 -127420361 - MLT1G1 LTR MaLR 0 567 361 611 269 72 38 chr10 18169004 18169296 -127419992 - MLT1G1 LTR MaLR -314 235 1 250 276 0 0 chr10 18169314 18169372 -127419916 + Tigger5 DNA MER2_type 21 78 -2245 2018 125 26 0 chr10 18169496 18169799 -127419489 + AluSq SINE Alu 1 311 -2 1028 192 44 125 chr10 18169927 18170312 -127418976 - MLT1A2 LTR MaLR -6 368 15 308 321 9 0 chr10 18170314 18170423 -127418865 + L1M4 LINE L1 3646 3755 -2391 1218 320 62 2 chr10 18170428 18170866 -127418422 - LTR16B LTR ERVL 0 464 1 424 304 77 66 chr10 18170926 18171026 -127418262 + L1M4 LINE L1 3796 3893 -2253 1535 181 0 87 chr10 18171026 18171358 -127417930 + AluJb SINE Alu 9 311 -1 424 304 77 66 chr10 18171358 18171381 -127417907 + L1M4 LINE L1 3893 3914 -2232 3858 122 16 26 chr10 18171381 18171955 -127417333 + MER61E LTR ERV1 2 569 0 424 304 77 66 chr10 18171955 18172061 -127417227 + L1M4 LINE L1 3914 4017 -2129 1613 172 4 15 chr10 18172061 18172334 -127416954 + AluSx SINE Alu 36 305 -7 424 304 77 66 chr10 18172334 18172456 -127416832 + L1M4 LINE L1 4017 4136 -2010 1617 210 0 23 chr10 18172456 18172756 -127416532 + AluJb SINE Alu 1 293 -19 424 304 77 66 chr10 18172756 18172773 -127416515 + L1M4 LINE L1 4136 4151 -1995 2309 100 3 3 chr10 18172773 18173074 -127416214 + AluY SINE Alu 1 301 -10 424 304 77 66 chr10 18173074 18173155 -127416133 + L1M4 LINE L1 4151 4254 -1892 509 108 0 12 chr10 18173207 18173290 -127415998 + (ATAAG)n Simple_repeat Simple_repeat 1 82 0 499 356 40 67 chr10 18174846 18175327 -127413961 - ERVL LTR ERVL -1466 4188 3695 2218 112 3 0 chr10 18175327 18175622 -127413666 - AluSx SINE Alu -16 296 1 499 356 40 67 chr10 18175622 18176152 -127413136 - ERVL LTR ERVL -1959 3695 3117 3786 321 43 17 chr10 18176605 18177104 -127412184 - ERVL LTR ERVL -1905 3091 2607 2142 134 3 0 chr10 18177104 18177402 -127411886 + AluSx SINE Alu 1 299 -13 3786 321 43 17 chr10 18177402 18178467 -127410821 - ERVL LTR ERVL -2389 2607 1421 1164 284 53 39 chr10 18178542 18178621 -127410667 - LTR16B LTR ERVL 0 464 388 2200 120 63 20 chr10 18178621 18178970 -127410318 + THE1B LTR MaLR 1 364 0 1164 284 53 39 chr10 18178970 18179323 -127409965 - LTR16B LTR ERVL -76 388 26 1732 140 125 74 chr10 18179620 18180027 -127409261 + MSTA LTR MaLR 1 428 0 546 244 27 76 chr10 18180073 18180298 -127408990 + L2 LINE L2 3100 3313 0 473 275 81 6 chr10 18180390 18180550 -127408738 - MIR SINE MIR -80 182 11 285 143 157 14 chr10 18181476 18181546 -127407742 - MADE1 DNA Mariner 0 80 1 198 150 0 0 chr10 18181760 18181800 -127407488 + (GA)n Simple_repeat Simple_repeat 2 41 0 21 0 0 0 chr10 18182084 18182105 -127407183 + AT_rich Low_complexity Low_complexity 1 21 0 257 317 20 40 chr10 18182314 18182442 -127406846 + MIR SINE MIR 38 163 -63 2311 116 0 0 chr10 18182515 18182825 -127406463 + AluSx SINE Alu 2 311 -1 389 269 174 0 chr10 18182924 18183073 -127406215 - MER5A DNA MER1_type -1 188 14 2095 108 0 21 chr10 18183262 18183572 -127405716 + AluSx SINE Alu 1 304 0 1304 203 5 0 chr10 18183667 18183889 -127405399 + AluJo SINE Alu 1 223 -89 285 344 33 0 chr10 18183967 18184089 -127405199 + MIR SINE MIR 6 131 -131 485 200 105 0 chr10 18184225 18184330 -127404958 - FLAM_A SINE Alu -17 125 10 198 311 112 15 chr10 18184414 18184553 -127404735 + MIR SINE MIR 35 188 -58 1875 141 37 7 chr10 18184616 18184913 -127404375 - AluSq SINE Alu 0 313 8 1612 149 4 47 chr10 18185028 18185303 -127403985 - AluSx SINE Alu -49 263 1 246 339 51 0 chr10 18185693 18185811 -127403477 + MIR3 SINE MIR 40 163 -45 2487 153 10 0 chr10 18185857 18186255 -127403033 - MER57A LTR ERV1 -1 402 1 4283 102 29 2 chr10 18186280 18186896 -127402392 + LTR10E LTR ERV1 1 633 0 4855 81 17 4 chr10 18187369 18188384 -127400904 - MER11A LTR ERVK 0 1266 1 378 0 0 0 chr10 18188423 18188465 -127400823 + (T)n Simple_repeat Simple_repeat 1 42 0 685 152 0 0 chr10 18189309 18189408 -127399880 + AluSg/x SINE Alu 195 293 -16 1791 155 0 10 chr10 18190016 18190307 -127398981 + AluSx SINE Alu 1 288 -24 342 114 0 0 chr10 18190322 18190366 -127398922 + Alu SINE Alu 1 44 -258 1452 174 27 19 chr10 18190366 18190574 -127398714 - THE1-int LTR MaLR -592 988 776 1751 112 0 0 chr10 18190574 18190807 -127398481 - AluSc SINE Alu -48 261 29 1963 118 0 24 chr10 18190807 18191095 -127398193 + THE1-int LTR MaLR 708 988 -592 299 136 0 0 chr10 18191095 18191139 -127398149 - AluSc SINE Alu -259 44 1 1869 155 0 10 chr10 18191155 18191445 -127397843 - AluSx SINE Alu -25 287 1 1788 123 0 0 chr10 18193562 18193805 -127395483 + AluSx SINE Alu 43 285 -27 2178 126 0 7 chr10 18194408 18194717 -127394571 - AluSx SINE Alu -3 309 3 1825 162 3 30 chr10 18195075 18195378 -127393910 + AluJb SINE Alu 1 295 -17 541 172 98 8 chr10 18195380 18195502 -127393786 + FLAM_C SINE Alu 1 133 0 317 247 59 0 chr10 18195530 18195615 -127393673 - L2 LINE L2 -32 3281 3192 234 150 0 0 chr10 18195618 18195658 -127393630 + (TATATG)n Simple_repeat Simple_repeat 1 40 0 370 199 15 23 chr10 18195688 18195819 -127393469 + (TA)n Simple_repeat Simple_repeat 1 130 0 231 174 0 0 chr10 18195836 18195882 -127393406 - LTR66 LTR ERVL -171 439 394 * 261 109 0 0 chr10 18195844 18195890 -127393398 + LTR66 LTR ERVL 394 439 -171 2725 163 62 57 chr10 18196584 18197181 -127392107 - LTR18B LTR ERVL -14 600 1 261 0 0 0 chr10 18197549 18197578 -127391710 + (CA)n Simple_repeat Simple_repeat 1 29 0 245 95 0 24 chr10 18197838 18197880 -127391408 + (TTTC)n Simple_repeat Simple_repeat 4 44 0 608 159 29 0 chr10 18197911 18198049 -127391239 + CT-rich Low_complexity Low_complexity 2 143 0 1585 193 7 17 chr10 18198072 18198368 -127390920 - AluJo SINE Alu -19 293 1 840 256 18 27 chr10 18198572 18198795 -127390493 - MER58A DNA MER1_type 0 224 4 1780 174 166 38 chr10 18199858 18200305 -127388983 - MLT1D LTR MaLR 0 505 2 1116 254 55 23 chr10 18200919 18201409 -127387879 + LTR10B LTR ERV1 6 505 0 2162 132 0 3 chr10 18202388 18202691 -127386597 + AluSx SINE Alu 1 302 -10 2108 209 67 54 chr10 18202745 18203342 -127385946 - MER77 LTR ERV1 0 605 1 479 321 125 8 chr10 18203399 18203751 -127385537 + L1ME LINE L1 3071 3463 -2683 384 289 50 16 chr10 18203824 18203945 -127385343 - LTR16C LTR ERVL -366 125 1 462 266 124 74 chr10 18203956 18204170 -127385118 + L1ME LINE L1 5384 5586 -535 186 43 0 0 chr10 18204170 18204193 -127385095 + (TG)n Simple_repeat Simple_repeat 2 24 0 462 266 124 74 chr10 18204193 18204396 -127384892 + L1ME LINE L1 5586 5822 -299 761 191 8 0 chr10 18204402 18204533 -127384755 + FLAM_C SINE Alu 2 133 -10 33 0 0 0 chr10 18204535 18204568 -127384720 + AT_rich Low_complexity Low_complexity 1 33 0 1693 131 200 17 chr10 18204872 18205232 -127384056 - MSTA LTR MaLR -2 426 1 289 76 24 11 chr10 18205386 18205442 -127383846 - MLT2B1 LTR ERVL 0 520 482 404 209 23 0 chr10 18205480 18205652 -127383636 + (TAGA)n Simple_repeat Simple_repeat 4 179 0 1647 123 83 45 chr10 18205654 18205987 -127383301 + THE1C LTR MaLR 3 409 -19 10407 120 32 10 chr10 18205987 18207533 -127381755 + THE1C-int LTR MaLR 1 1580 0 1712 169 52 35 chr10 18207533 18207900 -127381388 + THE1C LTR MaLR 1 373 -2 2259 227 6 28 chr10 18207957 18207990 -127381298 - MLT2B2 LTR ERVL -20 467 435 814 68 20 27 chr10 18207990 18208136 -127381152 + (GAAA)n Simple_repeat Simple_repeat 4 148 0 2259 227 6 28 chr10 18208136 18208599 -127380689 - MLT2B2 LTR ERVL -52 435 1 347 325 26 7 chr10 18208732 18208886 -127380402 + MER103 DNA DNA 8 164 -2 2337 127 19 101 chr10 18209298 18209387 -127379901 - MSTA LTR MaLR 0 428 333 1951 121 0 44 chr10 18209387 18209685 -127379603 - AluSx SINE Alu -27 285 1 2337 127 19 101 chr10 18209685 18209861 -127379427 - MSTA LTR MaLR -95 333 215 2316 100 7 0 chr10 18209861 18210160 -127379128 - AluSp SINE Alu -12 301 1 2337 127 19 101 chr10 18210160 18210359 -127378929 - MSTA LTR MaLR -213 215 1 774 244 55 39 chr10 18210599 18210853 -127378435 - LTR16B LTR ERVL -1 463 206 3084 109 109 69 chr10 18211233 18211712 -127377576 + MER4A LTR ERV1 17 528 -136 2223 99 0 3 chr10 18211712 18212004 -127377284 + AluY SINE Alu 1 291 -20 3084 109 109 69 chr10 18212004 18212147 -127377141 + MER4A LTR ERV1 528 664 0 2512 73 0 0 chr10 18213627 18213930 -127375358 - AluY SINE Alu -8 303 1 1963 121 60 0 chr10 18214890 18215171 -127374117 + AluSx SINE Alu 1 298 -14 244 342 53 33 chr10 18215540 18215692 -127373596 + MIR SINE MIR 18 172 -90 2567 139 37 57 chr10 18215781 18215840 -127373448 - L1MA9 LINE L1 0 6312 6253 1784 155 3 30 chr10 18215840 18216137 -127373151 + AluJb SINE Alu 1 289 -23 2567 139 37 57 chr10 18216137 18216298 -127372990 - L1MA9 LINE L1 -59 6253 6090 180 111 0 0 chr10 18216298 18216325 -127372963 + (TG)n Simple_repeat Simple_repeat 2 28 0 2567 139 37 57 chr10 18216325 18216771 -127372517 - L1MA9 LINE L1 -222 6090 5714 1872 151 3 10 chr10 18217297 18217596 -127371692 - AluJo SINE Alu -15 297 1 198 150 33 17 chr10 18217830 18217890 -127371398 + (TG)n Simple_repeat Simple_repeat 2 62 0 2264 123 0 0 chr10 18218000 18218308 -127370980 - AluSx SINE Alu -4 308 1 2462 60 0 19 chr10 18218829 18219144 -127370144 - AluY SINE Alu -2 309 1 1973 137 32 0 chr10 18219449 18219733 -127369555 - AluSx SINE Alu -19 293 1 1790 175 21 0 chr10 18219736 18220027 -127369261 - AluJo SINE Alu -15 297 1 1818 166 0 44 chr10 18220511 18220831 -127368457 + AluJo SINE Alu 1 306 -6 1673 192 0 3 chr10 18220993 18221280 -127368008 - AluJo SINE Alu -26 286 1 2174 130 33 28 chr10 18221864 18222226 -127367062 - THE1B LTR MaLR 0 364 1 1914 159 6 13 chr10 18223030 18223462 -127365826 + AluJb SINE Alu 1 430 0 245 274 116 21 chr10 18223646 18223741 -127365547 + MIR SINE MIR 70 173 -89 1642 182 17 14 chr10 18224187 18224484 -127364804 + AluJo SINE Alu 1 298 -14 5889 71 5 0 chr10 18224647 18225450 -127363838 - L1PA7 LINE L1 0 6154 5348 253 211 19 0 chr10 18226112 18226164 -127363124 + MER94 DNA DNA 82 134 0 21 0 0 0 chr10 18226176 18226197 -127363091 + AT_rich Low_complexity Low_complexity 1 21 0 300 323 54 6 chr10 18226377 18226544 -127362744 - L1ME LINE L1 -451 5719 5545 1297 217 151 57 chr10 18227602 18229561 -127359727 + SATR1 Satellite Satellite 1 2144 -413 1944 116 0 11 chr10 18229563 18229840 -127359448 - AluSx SINE Alu -38 274 1 335 251 154 69 chr10 18230274 18230446 -127358842 + MLT1L LTR MaLR 11 167 -448 2173 114 3 0 chr10 18230446 18230743 -127358545 + AluSg SINE Alu 1 298 -12 504 0 0 0 chr10 18230744 18230800 -127358488 + (AATAG)n Simple_repeat Simple_repeat 1 56 0 335 251 154 69 chr10 18230800 18230872 -127358416 + MLT1L LTR MaLR 166 278 -337 246 254 34 0 chr10 18231225 18231284 -127358004 + MIR SINE MIR 188 248 -14 312 70 0 0 chr10 18231527 18231570 -127357718 + (CA)n Simple_repeat Simple_repeat 1 43 0 538 341 52 13 chr10 18231853 18232082 -127357206 + MIR SINE MIR 11 248 -14 339 130 0 0 chr10 18232089 18232143 -127357145 - AluSx SINE Alu -12 290 237 313 0 0 0 chr10 18232141 18232178 -127357110 - tRNA-Gly-GGA tRNA tRNA -38 37 1 * 1504 157 4 20 chr10 18232185 18232434 -127356854 - AluSx SINE Alu -67 245 1 1122 248 99 39 chr10 18232633 18233039 -127356249 + L1ME LINE L1 22 467 -5929 1951 146 31 34 chr10 18233039 18233395 -127355893 - THE1A LTR MaLR 0 355 1 1122 248 99 39 chr10 18233395 18233501 -127355787 + L1ME LINE L1 467 565 -5831 1526 196 8 43 chr10 18233505 18233857 -127355431 + MER6A DNA MER2_type 1 340 -265 2112 254 50 64 chr10 18233937 18234302 -127354986 + L1ME LINE L1 634 1003 -5393 1692 214 14 14 chr10 18234302 18234667 -127354621 + MLT1A1 LTR MaLR 1 365 0 2112 254 50 64 chr10 18234667 18235516 -127353772 + L1ME LINE L1 1003 1831 -4565 6302 90 5 1 chr10 18235516 18236714 -127352574 + L1PA8A LINE L1 4925 6126 -5 1588 149 6 98 chr10 18236784 18237100 -127352188 - AluJo SINE Alu -25 287 1 305 196 39 20 chr10 18237107 18237209 -127352079 + L1ME LINE L1 1841 1944 -4452 3076 258 94 4 chr10 18237211 18238525 -127350763 + L1ME LINE L1 2239 3671 -2544 1779 223 85 25 chr10 18238555 18239430 -127349858 + L1ME LINE L1 4746 5672 -563 207 0 0 0 chr10 18239548 18239571 -127349717 + (TTA)n Simple_repeat Simple_repeat 3 25 0 379 329 137 35 chr10 18239791 18240214 -127349074 - L3b LINE CR1 -10 1573 1108 1989 145 0 3 chr10 18240962 18241258 -127348030 - AluSx SINE Alu -17 295 1 22 0 0 0 chr10 18241264 18241286 -127348002 + AT_rich Low_complexity Low_complexity 1 22 0 642 197 40 88 chr10 18241480 18241596 -127347692 - L1ME2 LINE L1 -173 5991 5871 2147 120 0 3 chr10 18241596 18241896 -127347392 - AluSx SINE Alu -13 299 1 642 197 40 88 chr10 18241896 18241969 -127347319 - L1ME2 LINE L1 -293 5871 5843 2109 120 147 5 chr10 18241969 18242344 -127346944 + MSTA LTR MaLR 1 428 0 642 197 40 88 chr10 18242344 18242428 -127346860 - L1ME2 LINE L1 -321 5843 5757 365 261 18 18 chr10 18242997 18243031 -127346257 - MIR SINE MIR -78 184 151 2402 82 7 0 chr10 18243031 18243335 -127345953 - AluSp SINE Alu -7 306 1 365 261 18 18 chr10 18243335 18243411 -127345877 - MIR SINE MIR -110 152 74 497 258 145 6 chr10 18244679 18244838 -127344450 - MIR SINE MIR 0 262 82 378 358 37 0 chr10 18244848 18244982 -127344306 - L2 LINE L2 0 3313 3175 2363 128 22 112 chr10 18245091 18245647 -127343641 + LTR10A LTR ERV1 1 506 -103 615 357 105 5 chr10 18246066 18246475 -127342813 + L3 LINE CR1 877 1326 -251 1189 178 92 43 chr10 18246476 18246627 -127342661 + MLT1A1 LTR MaLR 1 143 -222 2145 115 0 10 chr10 18246627 18246931 -127342357 + AluSg SINE Alu 1 301 -9 1189 178 92 43 chr10 18246931 18247127 -127342161 + MLT1A1 LTR MaLR 143 365 0 298 314 32 70 chr10 18247225 18247410 -127341878 - L2 LINE L2 -67 3205 3028 218 273 0 61 chr10 18247405 18247471 -127341817 + L2 LINE L2 3251 3312 -1 * 2033 130 14 0 chr10 18247681 18247973 -127341315 + AluSg SINE Alu 3 298 -12 291 282 19 19 chr10 18248061 18248164 -127341124 - L2 LINE L2 -2 3311 3209 845 246 46 54 chr10 18248883 18249143 -127340145 - MIR SINE MIR 0 262 5 2135 140 5 42 chr10 18249260 18249638 -127339650 - THE1B LTR MaLR 0 364 1 217 250 60 60 chr10 18249972 18250072 -127339216 - L2 LINE L2 -46 3267 3168 249 333 63 55 chr10 18250418 18250824 -127338464 - L2 LINE L2 -192 3080 2659 600 251 70 104 chr10 18250920 18251335 -127337953 + MLT1H1 LTR MaLR 68 443 -112 1754 161 44 3 chr10 18251335 18251633 -127337655 + AluJo SINE Alu 1 310 -2 600 251 70 104 chr10 18251633 18251737 -127337551 + MLT1H1 LTR MaLR 443 549 -6 387 129 20 10 chr10 18251804 18251905 -127337383 + (TCTA)n Simple_repeat Simple_repeat 3 104 0 1900 163 3 3 chr10 18251912 18252243 -127337045 - MLT2C1 LTR ERVL -66 331 1 1844 79 7 76 chr10 18252710 18252987 -127336301 + AluY SINE Alu 46 303 -8 271 309 138 8 chr10 18254447 18254570 -127334718 - MIR SINE MIR -3 259 121 240 35 0 0 chr10 18254947 18254976 -127334312 + (CA)n Simple_repeat Simple_repeat 2 30 0 695 99 0 0 chr10 18255443 18255556 -127333732 + FLAM_A SINE Alu 25 137 0 325 331 47 24 chr10 18256258 18256385 -127332903 + MIR SINE MIR 17 146 -62 3699 138 28 6 chr10 18256556 18257194 -127332094 + L1MA7 LINE L1 5639 6290 -1 24 0 0 0 chr10 18257969 18257993 -127331295 + AT_rich Low_complexity Low_complexity 1 24 0 244 269 65 32 chr10 18258101 18258194 -127331094 + L2 LINE L2 3172 3267 -5 217 226 19 19 chr10 18259741 18259794 -127329494 - L3 LINE CR1 -1 1576 1524 257 284 196 0 chr10 18260425 18260527 -127328761 - L2 LINE L2 -1 3271 3150 1823 171 10 13 chr10 18261402 18261700 -127327588 - AluSx SINE Alu -15 297 1 1957 108 33 49 chr10 18262142 18262447 -127326841 - AluSg SINE Alu -10 300 1 309 262 0 0 chr10 18263585 18263646 -127325642 + polypurine Low_complexity Low_complexity 1 61 0 601 201 17 11 chr10 18263646 18263825 -127325463 + GA-rich Low_complexity Low_complexity 1 180 0 670 276 155 6 chr10 18265391 18265906 -127323382 + L1MEc LINE L1 1731 2322 -4074 617 119 10 0 chr10 18265910 18266011 -127323277 + (GAA)n Simple_repeat Simple_repeat 1 102 0 2797 235 62 23 chr10 18266214 18266530 -127322758 + L1MEc LINE L1 3250 3552 -2663 306 0 0 0 chr10 18266530 18266564 -127322724 + (CA)n Simple_repeat Simple_repeat 2 35 0 2797 235 62 23 chr10 18266564 18267251 -127322037 + L1MEc LINE L1 3552 4292 -1923 2322 94 0 0 chr10 18267725 18268022 -127321266 - AluSg SINE Alu -13 297 1 474 291 24 18 chr10 18268627 18268792 -127320496 - MER63A DNA MER1_type -6 204 39 311 343 48 14 chr10 18269905 18270051 -127319237 - MIR SINE MIR -111 151 1 1229 236 4 19 chr10 18270386 18270657 -127318631 + Tigger7 DNA MER2_type 1 267 -2220 521 184 10 0 chr10 18270655 18270753 -127318535 + Tigger7 DNA MER2_type 2489 2587 0 * 952 239 124 43 chr10 18271639 18271986 -127317302 - LTR33 LTR ERVL -120 401 27 2482 119 8 3 chr10 18272157 18272519 -127316769 - THE1B LTR MaLR 0 364 1 604 260 28 163 chr10 18273031 18273127 -127316161 - L2 LINE L2 -4 3309 3202 2069 98 28 63 chr10 18273127 18273445 -127315843 + AluSp SINE Alu 2 308 -5 604 260 28 163 chr10 18273445 18273925 -127315363 - L2 LINE L2 -111 3202 2811 416 272 0 29 chr10 18273942 18274045 -127315243 + MER5A DNA MER1_type 10 109 -80 640 223 40 17 chr10 18274085 18274260 -127315028 - L1MB8 LINE L1 -1 6177 5999 * 2829 223 65 34 chr10 18274251 18275006 -127314282 - L1MEc LINE L1 -3166 3049 2271 2241 66 38 10 chr10 18275006 18275295 -127313993 - AluY SINE Alu -14 297 1 2829 223 65 34 chr10 18275295 18275712 -127313576 - L1MEc LINE L1 -3944 2271 1868 2057 288 64 9 chr10 18275815 18276514 -127312774 - L2 LINE L2 -508 2806 2069 2023 139 7 7 chr10 18276514 18276824 -127312464 + AluSx SINE Alu 1 310 -2 188 299 15 15 chr10 18276965 18277032 -127312256 + MER5A DNA MER1_type 122 188 -1 276 349 108 0 chr10 18277457 18277623 -127311665 + MIR SINE MIR 53 236 -26 453 139 0 38 chr10 18277723 18277802 -127311486 - MLT1F LTR MaLR -4 538 463 * 594 259 35 0 chr10 18277799 18277942 -127311346 - MLT1F LTR MaLR -369 173 26 3852 143 52 19 chr10 18277943 18278591 -127310697 + LTR51 LTR ERV1 1 670 -1 387 0 0 0 chr10 18279084 18279127 -127310161 + (CA)n Simple_repeat Simple_repeat 1 43 0 222 345 149 0 chr10 18279138 18279225 -127310063 + MIR3 SINE MIR 55 154 -54 1872 117 32 32 chr10 18279445 18279780 -127309508 + AluSx SINE Alu 2 336 0 960 133 13 13 chr10 18279963 18280114 -127309174 - FRAM SINE Alu -26 150 1 263 286 0 14 chr10 18281246 18281316 -127307972 + MLT1J2 LTR MaLR 263 331 -119 2340 159 45 23 chr10 18281974 18282414 -127306874 + LTR7 LTR ERV1 1 450 0 376 229 59 42 chr10 18282464 18282582 -127306706 - L2 LINE L2 0 3272 3153 2382 88 0 3 chr10 18283857 18284164 -127305124 + AluY SINE Alu 1 306 -5 207 244 0 0 chr10 18284279 18284357 -127304931 + GA-rich Low_complexity Low_complexity 1 78 0 593 89 89 0 chr10 18284439 18284529 -127304759 + MER4A LTR ERV1 1 98 -566 1739 128 174 76 chr10 18284529 18284897 -127304391 + MER4A LTR ERV1 261 664 0 2999 97 145 36 chr10 18284900 18285457 -127303831 + MER4A-int LTR ERV1 1 618 -5980 344 177 0 38 chr10 18285462 18285541 -127303747 + MER4A-int LTR ERV1 751 826 -5772 252 156 0 44 chr10 18285564 18285609 -127303679 + LTR49 LTR ERV1 271 313 -282 995 142 32 16 chr10 18285629 18285819 -127303469 + MER4A-int LTR ERV1 993 1185 -5413 294 239 0 0 chr10 18285822 18285914 -127303374 + (TG)n Simple_repeat Simple_repeat 1 92 0 680 88 42 162 chr10 18285914 18286159 -127303129 + MER4A-int LTR ERV1 566 749 -4266 4293 85 72 8 chr10 18286185 18286835 -127302453 + MER4A-int LTR ERV1 1804 2495 -4103 1401 163 75 0 chr10 18286835 18287074 -127302214 - LTR8 LTR ERV1 -434 257 1 1188 57 6 6 chr10 18287074 18287251 -127302037 + MER4A-int LTR ERV1 2737 2913 -3685 15662 101 66 17 chr10 18287270 18287306 -127301982 + MER4A-int LTR ERV1 3964 3997 -2601 1967 132 0 0 chr10 18287306 18287578 -127301710 - AluSq SINE Alu -41 272 1 15662 101 66 17 chr10 18287578 18290014 -127299274 + MER4A-int LTR ERV1 3997 6563 -35 215 31 31 0 chr10 18290014 18290046 -127299242 + (TTTG)n Simple_repeat Simple_repeat 4 36 0 15662 101 66 17 chr10 18290046 18290079 -127299209 + MER4A-int LTR ERV1 6563 6593 -5 537 88 99 11 chr10 18290090 18290181 -127299107 + MER4A LTR ERV1 1 99 -565 596 139 10 137 chr10 18290181 18290391 -127298897 + MER4A LTR ERV1 262 504 -160 1763 128 87 17 chr10 18290391 18290767 -127298521 - LTR7 LTR ERV1 0 450 1 1153 137 6 0 chr10 18290767 18290930 -127298358 + MER4B LTR ERV1 445 608 -2 1541 167 8 0 chr10 18290933 18291185 -127298103 + AluJo SINE Alu 21 274 -38 285 29 0 0 chr10 18291188 18291222 -127298066 + (CA)n Simple_repeat Simple_repeat 1 34 0 1854 81 12 142 chr10 18291222 18291566 -127297722 + AluSg SINE Alu 1 299 -11 1990 165 59 34 chr10 18291619 18292007 -127297281 - MER48 LTR ERV1 0 398 1 2044 96 3 51 chr10 18292266 18292579 -127296709 - AluSp SINE Alu -15 298 1 351 217 76 11 chr10 18292812 18292904 -127296384 - MLT1I LTR MaLR -7 402 305 529 115 0 0 chr10 18292961 18293039 -127296249 + MLT2B1 LTR ERVL 5 82 -438 3451 135 41 87 chr10 18293646 18294370 -127294918 + LTR8 LTR ERV1 1 691 0 1008 166 6 0 chr10 18294848 18295005 -127294283 - FRAM SINE Alu -25 151 1 1625 157 32 11 chr10 18295014 18295295 -127293993 - AluJo SINE Alu -25 287 1 2333 91 3 0 chr10 18295874 18296170 -127293118 - AluSp SINE Alu -16 297 1 2284 64 7 7 chr10 18296257 18296574 -127292714 - AluY SINE Alu 0 311 1 405 304 32 45 chr10 18296753 18296973 -127292315 + MIR SINE MIR 32 248 -14 362 332 109 34 chr10 18297043 18297392 -127291896 - L2 LINE L2 -1 3312 2938 872 186 6 0 chr10 18297393 18297549 -127291739 + FRAM SINE Alu 1 157 -19 237 260 55 0 chr10 18297655 18297728 -127291560 - L2 LINE L2 -650 2664 2588 366 225 47 87 chr10 18297738 18297883 -127291405 - MLT1I LTR MaLR -7 416 303 3136 136 37 29 chr10 18297883 18298399 -127290889 + MLT2B1 LTR ERVL 1 520 0 366 225 47 87 chr10 18298399 18298435 -127290853 - MLT1I LTR MaLR -120 303 267 235 264 11 46 chr10 18298530 18298617 -127290671 - MLT1I LTR MaLR -284 125 42 310 320 0 0 chr10 18298670 18298767 -127290521 - L2 LINE L2 -756 2558 2462 1838 143 122 36 chr10 18299984 18300319 -127288969 + THE1B LTR MaLR 1 364 0 27 29 0 0 chr10 18300555 18300589 -127288699 + AT_rich Low_complexity Low_complexity 1 34 0 2163 105 28 0 chr10 18300615 18300900 -127288388 + AluSp SINE Alu 2 294 -19 217 332 109 43 chr10 18301208 18301419 -127287869 + L2 LINE L2 1063 1287 -2027 2423 84 0 3 chr10 18302239 18302548 -127286740 - AluSq SINE Alu -5 308 1 2370 100 0 0 chr10 18303058 18303358 -127285930 + AluSx SINE Alu 1 300 -12 305 309 67 47 chr10 18304191 18304340 -127284948 - L2 LINE L2 -29 3243 3092 1296 167 149 32 chr10 18304617 18304648 -127284640 - LTR37A LTR ERV1 -1 425 399 1893 160 7 10 chr10 18304648 18304954 -127284334 + AluJb SINE Alu 1 305 -7 1296 167 149 32 chr10 18304954 18305264 -127284024 - LTR37A LTR ERV1 -27 399 44 2066 125 10 0 chr10 18305264 18305553 -127283735 + AluSx SINE Alu 1 292 -20 14100 41 10 2 chr10 18305555 18307948 -127281340 + L1PA5 LINE L1 3748 6150 -4 848 100 0 0 chr10 18308521 18308631 -127280657 + HY1 scRNA scRNA 1 110 -2 2207 113 3 10 chr10 18308794 18309103 -127280185 + AluSx SINE Alu 1 307 -5 480 307 29 49 chr10 18309125 18309330 -127279958 - MIR SINE MIR -16 246 46 1334 221 28 36 chr10 18309356 18309445 -127279843 + LTR37A LTR ERV1 5 93 -333 1853 205 94 13 chr10 18309445 18309893 -127279395 + MER31A LTR ERV1 1 484 -1 1334 221 28 36 chr10 18309893 18310161 -127279127 + LTR37A LTR ERV1 93 359 -67 1197 189 25 8 chr10 18310161 18310399 -127278889 + AluJo SINE Alu 62 303 -9 317 153 0 14 chr10 18310401 18310473 -127278815 + LTR37A LTR ERV1 356 426 0 467 305 52 66 chr10 18310520 18310615 -127278673 + MIR SINE MIR 11 106 -156 2273 107 0 10 chr10 18310615 18310924 -127278364 + AluY SINE Alu 1 306 -5 467 305 52 66 chr10 18310924 18311041 -127278247 + MIR SINE MIR 106 220 -42 1627 235 80 45 chr10 18311094 18311631 -127277657 + MER34B LTR ERV1 6 561 -4 302 287 222 9 chr10 18311683 18311791 -127277497 - MER5A DNA MER1_type 0 189 59 2113 127 10 0 chr10 18311806 18312106 -127277182 - AluSp SINE Alu -10 303 1 2705 203 17 11 chr10 18312172 18312705 -127276583 + LTR31 LTR ERV1 69 604 -15 197 328 17 0 chr10 18312713 18312771 -127276517 - MER5A DNA MER1_type -122 67 9 2046 105 25 0 chr10 18313397 18313682 -127275606 + AluSx SINE Alu 1 292 -20 204 40 0 0 chr10 18313686 18313711 -127275577 + (TAAA)n Simple_repeat Simple_repeat 2 26 0 36 0 0 0 chr10 18313751 18313787 -127275501 + AT_rich Low_complexity Low_complexity 1 36 0 2334 108 0 0 chr10 18314725 18315022 -127274266 - AluSx SINE Alu -15 297 1 244 338 14 0 chr10 18315199 18315273 -127274015 + Tigger8 DNA MER2_type 573 647 -19 722 113 0 182 chr10 18315362 18315521 -127273767 + AluJo SINE Alu 2 131 -171 242 256 0 64 chr10 18315522 18315567 -127273721 + AluJo SINE Alu 201 241 -61 1992 107 7 0 chr10 18315567 18315839 -127273449 + AluSp SINE Alu 34 307 -6 242 256 0 64 chr10 18315839 18315871 -127273417 + AluJo SINE Alu 241 273 -29 273 29 0 0 chr10 18317112 18317146 -127272142 + (TG)n Simple_repeat Simple_repeat 1 34 0 2138 84 15 0 chr10 18317149 18317422 -127271866 - AluSq SINE Alu -36 277 1 938 243 24 0 chr10 18318669 18318924 -127270364 + L1MA4 LINE L1 6039 6299 -1 220 276 0 0 chr10 18319186 18319244 -127270044 + T-rich Low_complexity Low_complexity 1 58 0 181 288 62 0 chr10 18319781 18319861 -127269427 - MIR SINE MIR -53 209 125 1087 324 112 18 chr10 18319878 18320434 -127268854 + L2 LINE L2 873 1480 -1834 1457 216 70 35 chr10 18320434 18320805 -127268483 - MLT1B LTR MaLR 0 390 7 211 320 181 26 chr10 18320811 18321120 -127268168 + L2 LINE L2 1476 1832 -1482 230 191 146 91 chr10 18321153 18321263 -127268025 + MER39 LTR ERV1 4 119 -588 * 789 222 128 49 chr10 18321246 18321676 -127267612 + LTR48B LTR ERV1 148 782 -5 194 217 22 0 chr10 18321682 18321728 -127267560 + L2 LINE L2 1881 1927 -1387 2497 82 0 0 chr10 18321742 18322046 -127267242 - AluSg SINE Alu -6 304 1 792 283 41 8 chr10 18322701 18322945 -127266343 + MER34 LTR ERV1 34 285 -257 317 177 16 0 chr10 18323003 18323065 -127266223 + LTR52-int LTR ERVL 693 755 -4588 2072 130 0 16 chr10 18323289 18323597 -127265691 - AluSx SINE Alu -8 304 2 402 78 0 0 chr10 18323598 18323649 -127265639 - L1M4 LINE L1 -577 5607 5557 285 241 28 74 chr10 18323794 18323902 -127265386 + LTR52-int LTR ERVL 503 605 -2951 2437 87 3 0 chr10 18324225 18324523 -127264765 - AluSx SINE Alu -13 299 1 1870 147 0 51 chr10 18324526 18324840 -127264448 - AluJo SINE Alu -12 300 3 2719 78 3 0 chr10 18325083 18325431 -127263857 - L1PA13 LINE L1 -26 6137 5789 2400 70 10 0 chr10 18325445 18325743 -127263545 - AluSp SINE Alu -12 301 1 2299 109 7 0 chr10 18326229 18326532 -127262756 + AluSx SINE Alu 1 305 -7 241 239 0 0 chr10 18327511 18327557 -127261731 + MIR SINE MIR 107 152 -110 279 258 161 0 chr10 18327728 18327852 -127261436 - MIR SINE MIR -32 230 87 1815 156 7 14 chr10 18327939 18328228 -127261060 - AluJb SINE Alu -25 287 1 212 314 20 0 chr10 18328242 18328293 -127260995 - L3b LINE CR1 -17 1566 1515 1889 126 0 0 chr10 18328330 18328592 -127260696 - AluSx SINE Alu -18 294 33 193 243 100 43 chr10 18328758 18328828 -127260460 + L2 LINE L2 3194 3267 -5 1451 225 38 67 chr10 18329834 18330289 -127258999 - L1MC5 LINE L1 -51 7910 7474 2423 69 0 3 chr10 18330289 18330593 -127258695 - AluY SINE Alu -8 303 1 1451 225 38 67 chr10 18330593 18330720 -127258568 - L1MC5 LINE L1 -487 7474 7345 26 30 0 0 chr10 18330745 18330778 -127258510 + AT_rich Low_complexity Low_complexity 1 33 0 1448 218 62 107 chr10 18330826 18331534 -127257754 - L1MC5 LINE L1 -632 7329 6658 2146 129 0 3 chr10 18331534 18331836 -127257452 - AluSx SINE Alu -11 301 1 1448 218 62 107 chr10 18331836 18331927 -127257361 - L1MC5 LINE L1 -1303 6658 6564 895 136 0 0 chr10 18332062 18332180 -127257108 + FLAM_C SINE Alu 1 118 -15 554 282 69 69 chr10 18332552 18332710 -127256578 - HAL1b LINE L1 -683 665 508 2267 97 3 3 chr10 18332710 18333021 -127256267 - AluSq SINE Alu -2 311 1 554 282 69 69 chr10 18333021 18333312 -127255976 - HAL1b LINE L1 -839 509 216 882 145 0 0 chr10 18333449 18333580 -127255708 - FLAM_C SINE Alu -12 131 1 204 342 13 7 chr10 18333590 18333739 -127255549 + T-rich Low_complexity Low_complexity 4 153 0 1598 188 0 34 chr10 18333789 18334087 -127255201 - AluJo SINE Alu -4 308 21 789 189 0 54 chr10 18335475 18335623 -127253665 - FLAM_C SINE Alu -2 141 2 459 265 86 86 chr10 18336188 18336501 -127252787 + HAL1 LINE L1 1322 1634 -873 426 311 72 17 chr10 18336540 18336720 -127252568 - MLT1J LTR MaLR -108 403 214 677 256 0 12 chr10 18336848 18337008 -127252280 - MLT1J LTR MaLR -325 186 29 640 289 155 34 chr10 18337058 18337968 -127251320 + L1ME3A LINE L1 4074 5093 -1053 234 0 0 0 chr10 18338162 18338188 -127251100 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 392 331 104 21 chr10 18338211 18338703 -127250585 + L1ME3A LINE L1 5347 5882 -288 2102 105 0 68 chr10 18338768 18339091 -127250197 + AluSx SINE Alu 1 301 -11 1946 178 65 11 chr10 18340520 18340875 -127248413 - THE1C LTR MaLR -1 374 1 276 284 194 26 chr10 18340946 18341101 -127248187 - MIR SINE MIR -1 261 81 1271 210 63 71 chr10 18341174 18341622 -127247666 - MER66A LTR ERV1 0 478 97 1876 147 31 10 chr10 18341626 18341919 -127247369 - AluJo SINE Alu 0 312 14 834 185 0 0 chr10 18342865 18342995 -127246293 - FLAM_C SINE Alu -3 130 1 533 140 43 0 chr10 18343234 18343327 -127245961 - LTR49 LTR ERV1 -5 590 494 23 0 0 0 chr10 18343332 18343355 -127245933 + AT_rich Low_complexity Low_complexity 1 23 0 1794 68 5 0 chr10 18343493 18343712 -127245576 - AluY SINE Alu -91 220 1 2978 123 43 54 chr10 18343739 18343987 -127245301 - MER39B LTR ERV1 -122 531 282 2158 138 39 30 chr10 18343987 18344348 -127244940 - THE1B LTR MaLR 0 364 1 2978 123 43 54 chr10 18344348 18344393 -127244895 - MER39B LTR ERV1 -371 282 238 1402 201 60 7 chr10 18344393 18344677 -127244611 - AluJo SINE Alu -13 299 1 2978 123 43 54 chr10 18344677 18344919 -127244369 - MER39B LTR ERV1 -415 238 1 344 267 30 10 chr10 18345009 18345110 -127244178 - L2 LINE L2 0 3313 3211 207 256 0 33 chr10 18345164 18345254 -127244034 + A-rich Low_complexity Low_complexity 4 90 0 235 229 92 76 chr10 18345987 18346118 -127243170 + MIR3 SINE MIR 24 156 -52 2363 79 26 0 chr10 18346896 18347199 -127242089 + AluY SINE Alu 1 311 0 28 0 0 0 chr10 18347220 18347248 -127242040 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr10 18347839 18347867 -127241421 + AT_rich Low_complexity Low_complexity 1 28 0 2006 117 0 17 chr10 18347961 18348251 -127241037 - AluSx SINE Alu -9 303 19 287 202 138 32 chr10 18348544 18348665 -127240623 - MIR3 SINE MIR -62 146 15 337 246 24 157 chr10 18349279 18349527 -127239761 - L2 LINE L2 -219 3053 2839 409 276 25 111 chr10 18349835 18350169 -127239119 - L2 LINE L2 -604 2710 2408 3628 119 33 4 chr10 18350169 18350680 -127238608 - MER1A DNA MER1_type -1 526 1 409 276 25 111 chr10 18350680 18350707 -127238581 - L2 LINE L2 -906 2408 2380 364 309 101 14 chr10 18350710 18350849 -127238439 - MIR SINE MIR -91 171 21 663 301 101 39 chr10 18351228 18351613 -127237675 - L2 LINE L2 0 3313 2905 835 176 8 0 chr10 18352348 18352479 -127236809 - FLAM_A SINE Alu -1 132 1 226 284 53 0 chr10 18352529 18352624 -127236664 - L1M4 LINE L1 -2243 3903 3804 2272 93 3 0 chr10 18352712 18353003 -127236285 + AluSg SINE Alu 1 292 -18 2110 128 0 7 chr10 18353030 18353326 -127235962 + AluSx SINE Alu 1 294 -18 1568 169 19 51 chr10 18354427 18354741 -127234547 - AluJo SINE Alu -4 308 5 1724 166 0 34 chr10 18355078 18355394 -127233894 - AluJo SINE Alu 0 306 1 2850 16 0 0 chr10 18355531 18355841 -127233447 + AluYa5 SINE Alu 1 310 -1 186 200 13 27 chr10 18356151 18356226 -127233062 + (TA)n Simple_repeat Simple_repeat 1 74 0 287 144 61 15 chr10 18356333 18356465 -127232823 + (TA)n Simple_repeat Simple_repeat 1 138 0 487 126 52 29 chr10 18356507 18356681 -127232607 + (TA)n Simple_repeat Simple_repeat 1 178 0 180 109 43 22 chr10 18356725 18356771 -127232517 + (TA)n Simple_repeat Simple_repeat 1 47 0 248 188 0 47 chr10 18358437 18358501 -127230787 - L1MC5 LINE L1 -45 7916 7856 1369 217 11 49 chr10 18358697 18359065 -127230223 - MLT1A1 LTR MaLR -11 354 1 530 274 138 19 chr10 18359066 18359399 -127229889 - MER57A LTR ERV1 0 403 9 719 239 27 63 chr10 18359409 18359631 -127229657 - MER58A DNA MER1_type -9 215 2 360 249 150 98 chr10 18359959 18360227 -127229061 - L1M2 LINE L1 -5766 1083 830 207 114 0 0 chr10 18360227 18360262 -127229026 + (CGG)n Simple_repeat Simple_repeat 2 36 0 360 249 150 98 chr10 18360262 18360375 -127228913 - L1M2 LINE L1 -6019 830 677 198 0 0 0 chr10 18360375 18360397 -127228891 + (CTG)n Simple_repeat Simple_repeat 3 24 0 360 249 150 98 chr10 18360397 18360420 -127228868 - L1M2 LINE L1 -6172 677 657 37 0 0 0 chr10 18360449 18360486 -127228802 + GC_rich Low_complexity Low_complexity 1 37 0 2260 116 0 0 chr10 18361162 18361456 -127227832 + AluSq SINE Alu 1 294 -19 22 0 0 0 chr10 18361510 18361532 -127227756 + AT_rich Low_complexity Low_complexity 1 22 0 1570 260 86 19 chr10 18361538 18361799 -127227489 + L1ME3A LINE L1 5590 5832 -338 315 0 0 0 chr10 18361799 18361834 -127227454 + (CA)n Simple_repeat Simple_repeat 2 36 0 1570 260 86 19 chr10 18361834 18362107 -127227181 + L1ME3A LINE L1 5832 6160 -10 370 285 69 15 chr10 18362408 18362538 -127226750 + MIR SINE MIR 52 188 -74 596 244 30 111 chr10 18362889 18362959 -127226329 - MIR SINE MIR -6 256 182 2554 117 41 34 chr10 18362959 18363395 -127225893 - L1PB4 LINE L1 -7 6149 5711 596 244 30 111 chr10 18363395 18363595 -127225693 - MIR SINE MIR -80 182 8 255 31 0 0 chr10 18363621 18363653 -127225635 + (TG)n Simple_repeat Simple_repeat 2 33 0 1899 163 0 3 chr10 18363795 18364096 -127225192 + AluSx SINE Alu 1 300 -12 405 295 73 70 chr10 18365236 18365592 -127223696 - L1M4 LINE L1 -2985 3161 2805 1869 117 10 33 chr10 18365619 18365953 -127223335 + AluY SINE Alu 1 311 0 1788 144 54 4 chr10 18366438 18366715 -127222573 + AluSx SINE Alu 1 291 -21 26 30 0 0 chr10 18366715 18366748 -127222540 + AT_rich Low_complexity Low_complexity 1 33 0 3713 74 18 10 chr10 18367022 18367537 -127221751 - L1PA11 LINE L1 -348 5826 5308 1912 125 38 3 chr10 18367538 18367825 -127221463 - AluSx SINE Alu -15 297 1 184 395 53 0 chr10 18367844 18367958 -127221330 - L2 LINE L2 -508 2806 2687 247 238 16 0 chr10 18368204 18368267 -127221021 + (TA)n Simple_repeat Simple_repeat 1 64 0 2202 98 40 0 chr10 18368398 18368694 -127220594 + AluSg SINE Alu 1 308 -2 224 323 68 62 chr10 18369316 18369771 -127219517 - L2 LINE L2 -823 2491 2034 206 259 52 0 chr10 18372087 18372145 -127217143 + L2 LINE L2 3148 3208 -64 2270 102 0 0 chr10 18372929 18373224 -127216064 + AluSg SINE Alu 1 295 -15 1820 208 35 37 chr10 18373409 18373487 -127215801 + L1M4 LINE L1 4885 4962 -1216 1846 116 25 7 chr10 18373487 18373791 -127215497 + AluSx SINE Alu 1 309 0 1820 208 35 37 chr10 18373791 18374303 -127214985 + L1M4 LINE L1 4962 5469 -709 823 453 36 22 chr10 18374590 18374868 -127214420 + AluSx SINE Alu 1 282 -30 6790 40 2 0 chr10 18374880 18375676 -127213612 - L1PA3 LINE L1 -2 6153 5356 * 8116 31 0 4 chr10 18375663 18376642 -127212646 + L1PA3 LINE L1 4386 5360 -786 249 342 101 9 chr10 18376700 18376928 -127212360 + L2 LINE L2 2399 2647 -667 944 190 13 0 chr10 18376969 18377127 -127212161 - AluJb SINE Alu -26 286 127 1755 103 0 9 chr10 18377152 18377384 -127211904 + AluSg/x SINE Alu 68 297 -15 470 313 27 14 chr10 18377433 18377580 -127211708 + L2 LINE L2 3116 3264 -8 292 217 0 43 chr10 18377657 18377726 -127211562 + MER96B DNA MER1_type? 32 97 -320 617 122 0 0 chr10 18377729 18377819 -127211469 + MLT2B1 LTR ERVL 5 94 -426 701 150 18 9 chr10 18377826 18377939 -127211349 - AluJb SINE Alu -25 287 174 1748 185 76 47 chr10 18377952 18378358 -127210930 + MLT2B1 LTR ERVL 100 517 -3 277 154 0 0 chr10 18378358 18378406 -127210882 - MER96B DNA MER1_type? -101 316 269 941 148 6 60 chr10 18378406 18378588 -127210700 + AluJo SINE Alu 122 293 -19 923 133 4 124 chr10 18378595 18378760 -127210528 - MER96B DNA MER1_type? -164 253 123 1917 156 0 3 chr10 18378760 18379048 -127210240 + AluJb SINE Alu 1 287 -25 923 133 4 124 chr10 18379048 18379116 -127210172 - MER96B DNA MER1_type? -294 123 48 710 243 75 45 chr10 18379152 18379341 -127209947 + MER34B LTR ERV1 270 471 -94 1868 157 10 0 chr10 18379341 18379640 -127209648 - AluSg SINE Alu -8 302 1 710 243 75 45 chr10 18379640 18379718 -127209570 + MER34B LTR ERV1 471 545 -20 447 293 52 65 chr10 18380029 18380173 -127209115 - MIR SINE MIR -13 249 108 862 144 0 182 chr10 18380173 18380409 -127208879 + 7SK RNA RNA 1 193 0 447 293 52 65 chr10 18380409 18380493 -127208795 - MIR SINE MIR -154 108 24 187 170 19 19 chr10 18380535 18380588 -127208700 + CT-rich Low_complexity Low_complexity 3 55 0 474 196 149 0 chr10 18380601 18380708 -127208580 - L2 LINE L2 -1 3312 3190 1026 219 28 36 chr10 18380711 18380962 -127208326 + LTR8 LTR ERV1 1 249 -442 1047 244 23 99 chr10 18381183 18381658 -127207630 + L1ME2 LINE L1 5649 6087 -77 386 235 200 0 chr10 18381577 18381692 -127207596 + L1MA10 LINE L1 6169 6306 -28 * 214 278 68 98 chr10 18381729 18381934 -127207354 + MIR SINE MIR 6 204 -58 346 305 81 38 chr10 18382285 18383040 -127206248 - L1M4 LINE L1 -501 5683 4860 2027 150 0 0 chr10 18384018 18384318 -127204970 - AluJb SINE Alu -12 300 1 298 212 76 0 chr10 18385611 18385677 -127203611 + Tigger7 DNA MER2_type 2417 2487 0 260 222 19 0 chr10 18387538 18387592 -127201696 + L1ME3A LINE L1 6095 6149 -21 1642 159 18 25 chr10 18387621 18387897 -127201391 + AluJo SINE Alu 1 274 -38 674 146 28 28 chr10 18387900 18388078 -127201210 + GA-rich Low_complexity Low_complexity 1 178 0 201 138 0 0 chr10 18388078 18388107 -127201181 + (GGAA)n Simple_repeat Simple_repeat 1 29 0 219 139 0 0 chr10 18389015 18389051 -127200237 + (CA)n Simple_repeat Simple_repeat 2 37 0 21 36 0 0 chr10 18389121 18389149 -127200139 + AT_rich Low_complexity Low_complexity 1 28 0 1985 124 41 0 chr10 18389193 18389483 -127199805 - AluSx SINE Alu -9 303 2 22 35 0 0 chr10 18389592 18389621 -127199667 + AT_rich Low_complexity Low_complexity 1 29 0 300 27 0 0 chr10 18390508 18390545 -127198743 + (CA)n Simple_repeat Simple_repeat 2 38 0 220 208 42 28 chr10 18390574 18390646 -127198642 + (TATG)n Simple_repeat Simple_repeat 3 75 0 402 121 96 0 chr10 18390653 18390810 -127198478 + (TA)n Simple_repeat Simple_repeat 1 172 0 217 196 52 12 chr10 18390841 18391014 -127198274 + (TA)n Simple_repeat Simple_repeat 1 180 0 244 171 26 53 chr10 18391014 18391090 -127198198 + (TTATA)n Simple_repeat Simple_repeat 5 78 0 185 107 54 18 chr10 18391109 18391165 -127198123 + (TA)n Simple_repeat Simple_repeat 1 58 0 208 121 0 0 chr10 18392429 18392462 -127196826 + (CAAAAA)n Simple_repeat Simple_repeat 4 36 0 265 271 8 33 chr10 18392498 18392620 -127196668 - MER103 DNA DNA -46 120 2 1976 125 0 22 chr10 18393109 18393421 -127195867 + AluSg1 SINE Alu 5 309 0 1641 193 0 11 chr10 18393423 18393708 -127195580 + AluJo SINE Alu 1 282 -30 22 70 0 0 chr10 18393708 18393751 -127195537 + AT_rich Low_complexity Low_complexity 1 43 0 644 210 8 0 chr10 18394516 18394635 -127194653 + LTR31 LTR ERV1 499 618 -1 230 269 0 0 chr10 18394641 18394708 -127194580 - MER63 DNA MER1_type -36 1025 959 * 360 203 0 14 chr10 18394690 18394764 -127194524 - MER63 DNA MER1_type -310 750 678 636 226 221 0 chr10 18394980 18395170 -127194118 - MIR SINE MIR -22 240 9 320 282 18 9 chr10 18396669 18396779 -127192509 - L2 LINE L2 -8 3305 3195 6817 86 49 4 chr10 18397586 18398266 -127191022 - L1PA8 LINE L1 -2 6170 5464 1830 126 23 4 chr10 18398266 18398529 -127190759 - AluSx SINE Alu -12 300 33 6817 86 49 4 chr10 18398529 18398859 -127190429 - L1PA8 LINE L1 -708 5464 5150 3864 131 10 2 chr10 18398859 18399471 -127189817 + L1P LINE L1 4305 4921 -1225 378 0 0 0 chr10 18399471 18399513 -127189775 + (TA)n Simple_repeat Simple_repeat 2 43 0 2252 115 7 0 chr10 18399613 18399917 -127189371 - AluSx SINE Alu -6 306 1 1898 276 200 27 chr10 18399920 18400764 -127188524 + L2 LINE L2 1941 3020 -252 2410 160 70 5 chr10 18400764 18401164 -127188124 - MSTB LTR MaLR 0 426 1 1898 276 200 27 chr10 18401164 18401469 -127187819 + L2 LINE L2 3020 3271 -1 1478 154 62 19 chr10 18401898 18402157 -127187131 - AluJo SINE Alu -42 270 1 329 328 8 8 chr10 18402290 18402409 -127186879 - MIR SINE MIR -125 137 19 2460 90 0 0 chr10 18402520 18402831 -127186457 + AluSq SINE Alu 1 311 -2 253 385 17 17 chr10 18402835 18403014 -127186274 - L3 LINE CR1 -1339 238 60 1926 156 6 16 chr10 18403059 18403374 -127185914 + AluJb SINE Alu 1 312 0 2363 50 4 0 chr10 18403941 18404219 -127185069 + AluY SINE Alu 1 279 -32 187 54 54 0 chr10 18404222 18404259 -127185029 + A-rich Low_complexity Low_complexity 2 40 0 879 278 101 42 chr10 18404449 18404556 -127184732 + LTR16A LTR ERVL 51 150 -300 1798 162 126 26 chr10 18404556 18404945 -127184343 - MSTA LTR MaLR 0 428 1 879 278 101 42 chr10 18404945 18405215 -127184073 + LTR16A LTR ERVL 150 450 0 1581 173 20 34 chr10 18405381 18405676 -127183612 - AluJb SINE Alu -21 291 1 26 30 0 0 chr10 18405822 18405855 -127183433 + AT_rich Low_complexity Low_complexity 1 33 0 293 232 113 82 chr10 18407146 18407340 -127181948 + L2 LINE L2 3114 3313 0 2142 120 3 3 chr10 18407912 18408213 -127181075 - AluSx SINE Alu -11 301 1 205 231 19 0 chr10 18408534 18408586 -127180702 + (TA)n Simple_repeat Simple_repeat 1 53 0 248 217 0 0 chr10 18408618 18408664 -127180624 - LTR16C LTR ERVL 0 491 446 1766 172 14 3 chr10 18408672 18408969 -127180319 + AluSx SINE Alu 1 300 -12 729 118 28 28 chr10 18408972 18409150 -127180138 + GA-rich Low_complexity Low_complexity 3 180 0 856 234 85 55 chr10 18409157 18409225 -127180063 - LTR16C LTR ERVL -48 443 379 2873 184 28 4 chr10 18409225 18409731 -127179557 + LTR53 LTR ERVL 2 519 0 856 234 85 55 chr10 18409731 18410025 -127179263 - LTR16C LTR ERVL -112 379 70 2131 110 3 10 chr10 18410206 18410505 -127178783 + AluSx SINE Alu 1 297 -15 626 248 124 0 chr10 18410618 18410771 -127178517 - MER5A DNA MER1_type -5 184 13 187 325 57 31 chr10 18411952 18412146 -127177142 - L2 LINE L2 -222 3050 2852 432 171 0 0 chr10 18412687 18412763 -127176525 - Alu SINE Alu -1 311 236 1326 164 0 9 chr10 18412957 18413171 -127176117 - AluJo SINE Alu -100 212 1 5699 121 25 5 chr10 18413288 18414250 -127175038 - L1PB3 LINE L1 0 6154 5175 245 230 40 105 chr10 18414306 18414458 -127174830 + MLT1J2 LTR MaLR 1 142 -308 451 258 33 17 chr10 18414948 18415068 -127174220 + MIR SINE MIR 19 140 -122 820 276 144 29 chr10 18415084 18415719 -127173569 - L2 LINE L2 -4 3309 2605 3168 101 43 0 chr10 18416005 18416283 -127173005 + MER57B LTR ERV1 1 304 -130 210 71 0 0 chr10 18416283 18416311 -127172977 + (TTTA)n Simple_repeat Simple_repeat 4 31 0 3168 101 43 0 chr10 18416311 18416448 -127172840 + MER57B LTR ERV1 304 434 0 290 278 83 9 chr10 18416719 18416827 -127172461 + L1ME LINE L1 5387 5502 -619 180 0 0 0 chr10 18418062 18418082 -127171206 + (CA)n Simple_repeat Simple_repeat 2 21 0 541 264 68 0 chr10 18418745 18418908 -127170380 + MIR SINE MIR 79 252 -10 1593 180 37 19 chr10 18419221 18419543 -127169745 + MER65C LTR ERV1 1 328 -133 1979 131 70 59 chr10 18419543 18419699 -127169589 + THE1B LTR MaLR 3 156 -208 3937 40 0 0 chr10 18419699 18420149 -127169139 - L1PA4 LINE L1 0 6155 5706 1979 131 70 59 chr10 18420149 18420350 -127168938 + THE1B LTR MaLR 156 364 0 632 168 17 8 chr10 18420350 18420468 -127168820 + MER65C LTR ERV1 321 439 -22 1107 142 14 71 chr10 18420501 18420712 -127168576 - AluJo SINE Alu -27 285 87 290 157 0 0 chr10 18470713 18470764 -127118524 + Alu SINE Alu 252 302 0 2312 116 0 0 chr10 18471036 18471338 -127117950 - AluSx SINE Alu -10 302 1 1870 147 0 51 chr10 18471341 18471655 -127117633 - AluJo SINE Alu -12 300 3 2719 78 3 0 chr10 18471898 18472246 -127117042 - L1PA13 LINE L1 -26 6137 5789 2409 70 10 0 chr10 18472260 18472559 -127116729 - AluSp SINE Alu -11 302 1 2299 109 7 0 chr10 18473045 18473348 -127115940 + AluSx SINE Alu 1 305 -7 241 239 0 0 chr10 18474328 18474374 -127114914 + MIR SINE MIR 107 152 -110 279 258 161 0 chr10 18474545 18474669 -127114619 - MIR SINE MIR -32 230 87 1815 156 7 14 chr10 18474756 18475045 -127114243 - AluJb SINE Alu -25 287 1 212 314 20 0 chr10 18475059 18475110 -127114178 - L3b LINE CR1 -17 1566 1515 1866 130 0 0 chr10 18475147 18475409 -127113879 - AluSx SINE Alu -18 294 33 193 243 100 43 chr10 18475575 18475645 -127113643 + L2 LINE L2 3194 3267 -5 1076 226 37 66 chr10 18476649 18477105 -127112183 - L1MC5 LINE L1 -51 7910 7468 2509 59 0 7 chr10 18477108 18477415 -127111873 - AluY SINE Alu -6 305 1 325 0 0 0 chr10 18477429 18477464 -127111824 - U2 snRNA snRNA -153 35 1 400 214 40 24 chr10 18477464 18477590 -127111698 - L1MC5 LINE L1 -489 7472 7345 26 30 0 0 chr10 18477615 18477648 -127111640 + AT_rich Low_complexity Low_complexity 1 33 0 1413 218 64 107 chr10 18477696 18478404 -127110884 - L1MC5 LINE L1 -632 7329 6653 2251 116 0 3 chr10 18478404 18478705 -127110583 - AluSx SINE Alu -12 300 1 1413 218 64 107 chr10 18478705 18478801 -127110487 - L1MC5 LINE L1 -1308 6653 6554 293 176 0 0 chr10 18478908 18478959 -127110329 + FLAM SINE Alu 68 118 -15 592 280 69 69 chr10 18479331 18479489 -127109799 - HAL1b LINE L1 -683 665 508 2275 96 3 3 chr10 18479489 18479801 -127109487 - AluSq SINE Alu -1 312 1 592 280 69 69 chr10 18479801 18480092 -127109196 - HAL1b LINE L1 -839 509 216 882 145 0 0 chr10 18480229 18480360 -127108928 - FLAM_C SINE Alu -12 131 1 204 342 13 7 chr10 18480370 18480519 -127108769 + T-rich Low_complexity Low_complexity 4 153 0 1622 185 0 34 chr10 18480569 18480867 -127108421 - AluJo SINE Alu -4 308 21 2240 109 3 0 chr10 18481450 18481753 -127107535 - AluSg SINE Alu -6 304 1 1821 132 3 24 chr10 18483026 18483314 -127105974 + AluSx SINE Alu 1 282 -30 6928 30 2 0 chr10 18483326 18484122 -127105166 - L1PA3 LINE L1 -2 6153 5356 * 8114 31 0 4 chr10 18484109 18485088 -127104200 + L1PA3 LINE L1 4386 5360 -786 249 342 101 9 chr10 18485146 18485374 -127103914 + L2 LINE L2 2399 2647 -667 944 190 13 0 chr10 18485415 18485573 -127103715 - AluJb SINE Alu -26 286 127 1751 119 16 8 chr10 18485578 18485830 -127103458 + AluSg SINE Alu 42 295 -15 516 304 20 14 chr10 18485879 18486027 -127103261 + L2 LINE L2 3116 3264 -8 292 217 0 43 chr10 18486105 18486174 -127103114 + MER96B DNA MER1_type? 32 97 -320 595 133 0 0 chr10 18486177 18486267 -127103021 + MLT2B1 LTR ERVL 5 94 -421 701 150 18 9 chr10 18486274 18486387 -127102901 - AluJb SINE Alu -25 287 174 1748 185 76 47 chr10 18486400 18486806 -127102482 + MLT2B1 LTR ERVL 100 517 -3 277 154 0 0 chr10 18486806 18486854 -127102434 - MER96B DNA MER1_type? -101 316 269 941 148 6 60 chr10 18486854 18487036 -127102252 + AluJo SINE Alu 122 293 -19 923 133 4 124 chr10 18487043 18487208 -127102080 - MER96B DNA MER1_type? -164 253 123 1917 156 0 3 chr10 18487208 18487496 -127101792 + AluJb SINE Alu 1 287 -25 923 133 4 124 chr10 18487496 18487564 -127101724 - MER96B DNA MER1_type? -294 123 48 710 243 75 45 chr10 18487600 18487789 -127101499 + MER34B LTR ERV1 270 471 -94 1868 157 10 0 chr10 18487789 18488088 -127101200 - AluSg SINE Alu -8 302 1 710 243 75 45 chr10 18488088 18488166 -127101122 + MER34B LTR ERV1 471 545 -20 447 293 52 65 chr10 18488477 18488621 -127100667 - MIR SINE MIR -13 249 108 862 144 0 182 chr10 18488621 18488857 -127100431 + 7SK RNA RNA 1 193 0 447 293 52 65 chr10 18488857 18488941 -127100347 - MIR SINE MIR -154 108 24 471 196 149 0 chr10 18489124 18489231 -127100057 - L2 LINE L2 -1 3312 3190 2368 182 40 118 chr10 18489250 18490003 -127099285 + LTR8A LTR ERV1 34 727 0 219 188 43 29 chr10 18490015 18490084 -127099204 - L2 LINE L2 -122 3191 3122 1363 223 59 56 chr10 18490393 18490819 -127098469 - MER110A LTR ERV1 0 468 42 789 189 0 54 chr10 18492516 18492664 -127096624 - FLAM_C SINE Alu -2 141 2 459 265 86 86 chr10 18493229 18493542 -127095746 + HAL1 LINE L1 1322 1634 -873 426 311 72 17 chr10 18493581 18493761 -127095527 - MLT1J LTR MaLR -108 403 214 697 250 0 12 chr10 18493889 18494049 -127095239 - MLT1J LTR MaLR -325 186 29 640 289 155 34 chr10 18494099 18495009 -127094279 + L1ME3A LINE L1 4074 5093 -1053 234 0 0 0 chr10 18495203 18495229 -127094059 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 404 327 104 21 chr10 18495252 18495744 -127093544 + L1ME3A LINE L1 5347 5882 -288 2102 105 0 68 chr10 18495809 18496132 -127093156 + AluSx SINE Alu 1 301 -11 1167 170 66 0 chr10 18497407 18497619 -127091669 - THE1C LTR MaLR -1 374 149 927 170 0 7 chr10 18498663 18498810 -127090478 - FRAM SINE Alu -30 146 1 1790 150 46 29 chr10 18499136 18499443 -127089845 + AluSx SINE Alu 1 312 0 216 0 0 0 chr10 18499882 18499906 -127089382 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 697 250 78 96 chr10 18500187 18500467 -127088821 + MLT1H LTR MaLR 3 286 -263 1696 147 55 20 chr10 18500467 18500759 -127088529 + AluJo SINE Alu 10 311 -1 697 250 78 96 chr10 18500759 18500918 -127088370 + MLT1H LTR MaLR 286 446 -103 2159 146 48 31 chr10 18501090 18501446 -127087842 - THE1B LTR MaLR -2 362 1 2223 96 3 3 chr10 18501985 18502277 -127087011 + AluSg1 SINE Alu 1 292 -17 21 71 0 0 chr10 18502820 18502862 -127086426 + AT_rich Low_complexity Low_complexity 1 42 0 1700 166 15 0 chr10 18503788 18504059 -127085229 - AluJo SINE Alu -37 275 1 318 367 25 32 chr10 18504320 18504478 -127084810 - MIR3 SINE MIR -34 174 18 1914 155 10 0 chr10 18504873 18505177 -127084111 - AluJo SINE Alu -5 307 1 464 256 226 0 chr10 18505953 18506121 -127083167 - MIR SINE MIR -43 219 14 2078 120 0 40 chr10 18506446 18506770 -127082518 - AluSx SINE Alu -1 311 1 1750 184 29 41 chr10 18506802 18507119 -127082169 + Charlie4a DNA MER1_type 49 361 -1600 2187 116 0 3 chr10 18507119 18507422 -127081866 - AluSg SINE Alu -8 302 1 1750 184 29 41 chr10 18507422 18507517 -127081771 + Charlie4a DNA MER1_type 361 456 -52 748 263 80 9 chr10 18507988 18508201 -127081087 + MIR SINE MIR 15 242 -20 1496 166 3 55 chr10 18508390 18508679 -127080609 - MLT2D LTR ERVL 0 414 141 1298 190 38 90 chr10 18508681 18508900 -127080388 - MLT1A1 LTR MaLR -5 360 166 2140 141 0 0 chr10 18508900 18509206 -127080082 - AluSg SINE Alu -4 306 1 1298 190 38 90 chr10 18509206 18509354 -127079934 - MLT1A1 LTR MaLR -199 166 12 898 107 57 7 chr10 18509365 18509505 -127079783 - MLT2D LTR ERVL -267 147 1 910 264 100 73 chr10 18510138 18510374 -127078914 + LTR16B LTR ERVL 2 230 -234 1926 124 13 23 chr10 18510374 18510681 -127078607 + AluSx SINE Alu 1 304 -8 910 264 100 73 chr10 18510681 18510895 -127078393 + LTR16B LTR ERVL 230 464 0 287 341 39 0 chr10 18510971 18511100 -127078188 - MER94 DNA DNA 0 134 1 383 186 115 109 chr10 18511190 18511346 -127077942 - MER103 DNA DNA 0 166 10 937 225 42 80 chr10 18512240 18512686 -127076602 + MLT1A1 LTR MaLR 1 365 0 757 184 6 11 chr10 18512787 18512966 -127076322 + GA-rich Low_complexity Low_complexity 3 180 0 23 0 0 0 chr10 18513335 18513358 -127075930 + AT_rich Low_complexity Low_complexity 1 23 0 932 130 15 0 chr10 18513634 18513765 -127075523 + AluJo SINE Alu 3 135 -177 1179 95 0 0 chr10 18513918 18514065 -127075223 + AluSq SINE Alu 130 276 -37 820 36 27 0 chr10 18514070 18514181 -127075107 + (GAAA)n Simple_repeat Simple_repeat 2 115 0 1954 141 3 0 chr10 18515026 18515309 -127073979 - AluSx SINE Alu -13 299 16 7325 69 23 0 chr10 18515319 18516515 -127072773 - L1PA8 LINE L1 -1 6171 4967 1327 219 8 78 chr10 18516520 18516904 -127072384 + MLT2B1 LTR ERVL 8 364 -156 390 318 169 17 chr10 18516904 18517216 -127072072 + L2 LINE L2 2654 3010 -262 2136 101 3 48 chr10 18517499 18517815 -127071473 - AluSg SINE Alu -8 302 1 1824 115 0 0 chr10 18518626 18518870 -127070418 - AluSx SINE Alu -9 303 60 526 291 33 28 chr10 18519043 18519225 -127070063 - MER5A DNA MER1_type -6 183 1 2866 98 0 6 chr10 18519282 18519648 -127069640 + THE1B LTR MaLR 1 364 0 3531 74 7 2 chr10 18519875 18520323 -127068965 - L1PA13 LINE L1 -4 6159 5710 870 160 0 0 chr10 18520373 18520498 -127068790 + FLAM_A SINE Alu 1 125 -8 719 268 55 70 chr10 18521150 18521339 -127067949 + L2 LINE L2 7 190 -3124 2012 150 7 3 chr10 18521339 18521632 -127067656 + AluSx SINE Alu 1 294 -18 719 268 55 70 chr10 18521632 18521770 -127067518 + L2 LINE L2 190 329 -2985 1540 256 40 6 chr10 18522036 18522568 -127066720 + L1ME2 LINE L1 2797 3346 -2800 656 208 61 122 chr10 18522582 18522732 -127066556 + L1ME2 LINE L1 3510 3631 -2515 2246 113 0 0 chr10 18522732 18523025 -127066263 - AluSx SINE Alu -19 293 1 656 208 61 122 chr10 18523025 18523201 -127066087 + L1ME2 LINE L1 3631 3816 -2330 699 210 0 62 chr10 18523219 18523381 -127065907 + MSTD LTR MaLR 2 153 -243 781 114 35 0 chr10 18523419 18523533 -127065755 + MSTD LTR MaLR 279 396 0 257 264 23 11 chr10 18523533 18523620 -127065668 + L1ME2 LINE L1 3851 3938 -2208 846 165 0 119 chr10 18523627 18523821 -127065467 + AluSg/x SINE Alu 141 311 -1 362 228 0 0 chr10 18523836 18523920 -127065368 + L1MC/D LINE L1 5731 5814 -357 1572 254 103 15 chr10 18523923 18524506 -127064782 + L1ME2 LINE L1 3962 4595 -1551 2419 241 35 19 chr10 18524508 18525158 -127064130 + L1ME2 LINE L1 5493 6153 -11 632 241 67 27 chr10 18525189 18525413 -127063875 + L2 LINE L2 3080 3312 -1 2179 98 0 7 chr10 18525436 18525752 -127063536 - AluSq SINE Alu 0 314 1 736 240 35 66 chr10 18526028 18526316 -127062972 - MER97c DNA MER1_type? 0 1090 812 2195 104 0 7 chr10 18526401 18526698 -127062590 + AluSx SINE Alu 1 295 -17 2302 232 31 28 chr10 18526975 18527578 -127061710 - MER97b DNA MER1_type? -448 605 1 2227 107 10 0 chr10 18527636 18527927 -127061361 + AluSx SINE Alu 1 294 -18 614 173 8 0 chr10 18527930 18528063 -127061225 + (TA)n Simple_repeat Simple_repeat 1 134 0 2099 215 23 14 chr10 18528076 18528509 -127060779 - MER65C LTR ERV1 -24 437 1 2148 107 3 7 chr10 18528856 18529146 -127060142 + AluSx SINE Alu 2 290 -22 1425 180 77 15 chr10 18530142 18530414 -127058874 - AluJo SINE Alu -23 289 1 1509 221 179 2 chr10 18530440 18530869 -127058419 - MLT1D LTR MaLR 0 505 1 2188 110 10 0 chr10 18531004 18531295 -127057993 + AluSx SINE Alu 2 295 -17 4161 151 48 69 chr10 18531762 18531823 -127057465 - L1MB7 LINE L1 -8 6176 6115 2298 93 0 13 chr10 18531823 18532123 -127057165 + AluSx SINE Alu 1 296 -16 4161 151 48 69 chr10 18532123 18532727 -127056561 - L1MB7 LINE L1 -69 6115 5500 2343 142 72 5 chr10 18532727 18533128 -127056160 + MSTA LTR MaLR 1 428 0 4161 151 48 69 chr10 18533128 18533195 -127056093 - L1MB7 LINE L1 -684 5500 5433 2028 147 3 6 chr10 18533195 18533507 -127055781 - AluSq SINE Alu 0 313 3 4161 151 48 69 chr10 18533507 18533791 -127055497 - L1MB7 LINE L1 -751 5433 5186 1832 143 10 14 chr10 18534865 18535159 -127054129 - AluJb SINE Alu -19 293 1 1238 100 0 18 chr10 18535591 18535761 -127053527 + AluSx SINE Alu 1 167 -145 716 153 0 0 chr10 18535877 18535995 -127053293 + AluSp SINE Alu 1 118 -195 441 0 0 0 chr10 18536026 18536075 -127053213 + (TAAA)n Simple_repeat Simple_repeat 3 51 0 328 250 148 0 chr10 18536075 18536183 -127053105 + HsTC2 DNA Tc2 21 144 -1754 * 917 183 27 174 chr10 18536180 18536591 -127052697 + HsTC2 DNA Tc2 1281 1751 -147 210 71 0 0 chr10 18536591 18536619 -127052669 + (CA)n Simple_repeat Simple_repeat 1 28 0 1845 156 3 14 chr10 18536629 18536924 -127052364 - AluJb SINE Alu -20 292 1 917 183 27 174 chr10 18536924 18537017 -127052271 + HsTC2 DNA Tc2 1761 1890 -8 915 277 100 34 chr10 18537004 18537383 -127051905 - MLT1J LTR MaLR -14 497 94 * 727 249 38 33 chr10 18537387 18537600 -127051688 - MER58C DNA MER1_type -1 214 1 1975 113 85 3 chr10 18537638 18537921 -127051367 - AluSx SINE Alu -6 306 1 2087 123 0 13 chr10 18538094 18538396 -127050892 + AluSg SINE Alu 1 298 -12 3661 137 22 98 chr10 18538402 18538787 -127050501 + L1MB3 LINE L1 5440 5853 -330 2522 69 0 3 chr10 18538787 18539093 -127050195 + AluY SINE Alu 1 305 -6 3661 137 22 98 chr10 18539093 18539457 -127049831 + L1MB3 LINE L1 5853 6243 60 2132 87 0 7 chr10 18539457 18539746 -127049542 + L1PA7 LINE L1 5868 6154 0 2135 131 3 0 chr10 18539750 18540048 -127049240 + AluSp SINE Alu 1 299 -14 3661 137 22 98 chr10 18540048 18540097 -127049191 + L1MB3 LINE L1 6132 6183 0 2468 67 0 0 chr10 18540105 18540402 -127048886 + AluY SINE Alu 1 297 -14 1126 247 193 30 chr10 18540592 18540826 -127048462 + MER20B DNA MER1_type 1 195 -588 2612 178 74 17 chr10 18540826 18541086 -127048202 - MER41D LTR ERV1 0 557 313 2418 101 0 0 chr10 18541086 18541392 -127047896 + AluSq SINE Alu 1 306 -7 2612 178 74 17 chr10 18541392 18541658 -127047630 - MER41D LTR ERV1 -244 313 1 1126 247 193 30 chr10 18541658 18541962 -127047326 + MER20B DNA MER1_type 195 627 -156 2193 139 40 3 chr10 18542309 18542662 -127046626 - MLT2D LTR ERVL -48 366 1 2318 107 0 0 chr10 18543246 18543544 -127045744 - AluSg SINE Alu -12 298 1 509 332 71 5 chr10 18543644 18543855 -127045433 - MIR SINE MIR -15 247 23 2817 160 6 26 chr10 18543857 18544151 -127045137 - MER66B LTR ERV1 0 486 203 2215 117 7 0 chr10 18544151 18544458 -127044830 + AluSx SINE Alu 1 309 -3 2817 160 6 26 chr10 18544458 18544632 -127044656 - MER66B LTR ERV1 -283 203 27 1284 153 51 16 chr10 18544688 18544943 -127044345 + MER21A LTR ERV1 1 264 -667 2822 184 51 19 chr10 18544948 18545481 -127043807 + MER21A LTR ERV1 376 925 -6 1539 184 7 14 chr10 18546037 18546325 -127042963 + AluJb SINE Alu 1 286 -26 235 177 32 0 chr10 18546325 18546387 -127042901 + (TA)n Simple_repeat Simple_repeat 1 64 0 232 174 65 76 chr10 18546394 18546486 -127042802 - L1MC4 LINE L1 -1337 6705 6615 679 230 0 0 chr10 18547214 18547340 -127041948 + FLAM_C SINE Alu 2 127 -16 24 0 0 0 chr10 18547340 18547364 -127041924 + AT_rich Low_complexity Low_complexity 1 24 0 2955 77 25 10 chr10 18547938 18548330 -127040958 + MLT2A1 LTR ERVL 1 398 -46 309 73 41 77 chr10 18548331 18548586 -127040702 + (TA)n Simple_repeat Simple_repeat 1 245 0 221 145 29 43 chr10 18548589 18548658 -127040630 + (TATAA)n Simple_repeat Simple_repeat 2 69 0 185 0 0 39 chr10 18548772 18548798 -127040490 + (TA)n Simple_repeat Simple_repeat 1 25 0 257 0 0 29 chr10 18548821 18548855 -127040433 + (TA)n Simple_repeat Simple_repeat 1 33 0 240 82 49 33 chr10 18548875 18548936 -127040352 + (TA)n Simple_repeat Simple_repeat 2 63 0 315 309 33 26 chr10 18549034 18549186 -127040102 + L3 LINE CR1 977 1129 -448 1724 171 7 31 chr10 18549263 18549556 -127039732 + AluJo SINE Alu 3 288 -24 265 167 0 0 chr10 18549656 18549704 -127039584 + Alu SINE Alu 249 296 -5 291 266 42 56 chr10 18549704 18549847 -127039441 - L3 LINE CR1 -43 1534 1394 740 297 92 44 chr10 18549863 18550382 -127038906 - MLT1H LTR MaLR 0 549 6 2206 82 0 37 chr10 18550396 18550713 -127038575 + AluSx SINE Alu 1 306 0 779 185 15 0 chr10 18550803 18550938 -127038350 - MSTC LTR MaLR 0 428 292 1485 153 45 45 chr10 18550938 18551016 -127038272 - L1MA4 LINE L1 -5 6166 6090 4195 101 20 23 chr10 18551016 18551076 -127038212 - LTR43 LTR ERV1 -2 600 541 2235 109 13 0 chr10 18551076 18551380 -127037908 + AluSg SINE Alu 1 308 -2 4195 101 20 23 chr10 18551380 18551921 -127037367 - LTR43 LTR ERV1 -61 541 1 2138 123 0 0 chr10 18551927 18552220 -127037068 - AluSx SINE Alu -19 293 1 1485 153 45 45 chr10 18552220 18552508 -127036780 - L1MA4 LINE L1 -85 6086 5770 2097 118 6 13 chr10 18552508 18552822 -127036466 - AluSx SINE Alu 0 312 1 269 319 12 31 chr10 18552877 18553040 -127036248 + C-rich Low_complexity Low_complexity 6 165 0 1585 128 35 86 chr10 18553148 18553409 -127035879 - MSTC LTR MaLR -131 297 53 2265 117 0 0 chr10 18553409 18553708 -127035580 + AluSx SINE Alu 1 299 -13 1585 128 35 86 chr10 18553708 18553759 -127035529 - MSTC LTR MaLR -375 53 1 220 319 0 0 chr10 18553760 18553832 -127035456 - L3 LINE CR1 -262 1315 1244 424 243 19 9 chr10 18553924 18554031 -127035257 + MER5A DNA MER1_type 82 189 0 349 326 116 0 chr10 18554249 18554387 -127034901 + MLT1K LTR MaLR 60 213 -375 937 101 0 0 chr10 18554691 18554810 -127034478 - AluSg SINE Alu -191 119 1 1654 202 154 14 chr10 18556219 18556654 -127032634 + LTR54B LTR ERV1 1 496 -2 2103 109 0 0 chr10 18557278 18557584 -127031704 - AluSx SINE Alu 0 322 17 429 338 76 19 chr10 18557732 18557942 -127031346 + MLT1J2 LTR MaLR 99 320 -130 1677 163 10 42 chr10 18558054 18558360 -127030928 - AluSx SINE Alu -16 296 1 2000 122 0 0 chr10 18558793 18559080 -127030208 - AluSx SINE Alu 0 306 20 2406 82 0 7 chr10 18559082 18559387 -127029901 - AluSc SINE Alu -6 303 1 466 210 210 0 chr10 18559449 18559573 -127029715 - MLT1A1 LTR MaLR -215 150 1 598 257 155 54 chr10 18560243 18560262 -127029026 - L2 LINE L2 0 3313 3297 2016 108 22 0 chr10 18560262 18560530 -127028758 + AluSq SINE Alu 28 301 -12 598 257 155 54 chr10 18560530 18561061 -127028227 - L2 LINE L2 -16 3297 2711 1097 106 0 0 chr10 18561065 18561207 -127028081 - AluSg/x SINE Alu -17 293 152 414 317 48 59 chr10 18561231 18561390 -127027898 - L2 LINE L2 -626 2688 2532 2121 115 0 10 chr10 18561390 18561686 -127027602 - AluSx SINE Alu -9 303 11 414 317 48 59 chr10 18561686 18561816 -127027472 - L2 LINE L2 -782 2532 2402 186 296 14 0 chr10 18561963 18562034 -127027254 + L2 LINE L2 3200 3271 -1 757 211 54 11 chr10 18562392 18562577 -127026711 - MIR SINE MIR -48 214 22 516 305 45 0 chr10 18563103 18563280 -127026008 + MIR SINE MIR 78 262 0 1789 146 57 4 chr10 18563305 18563586 -127025702 - AluJb SINE Alu -16 296 1 2717 228 49 37 chr10 18564384 18565479 -127023809 + L1M4 LINE L1 2298 3405 -2741 899 137 0 39 chr10 18565486 18565639 -127023649 - AluSg/x SINE Alu -59 253 107 1696 114 5 106 chr10 18565801 18566169 -127023119 - L1MB8 LINE L1 -6 6172 5842 221 325 25 25 chr10 18566169 18566289 -127022999 + L2 LINE L2 3189 3308 -5 6510 188 15 8 chr10 18566974 18568099 -127021189 - L1M1 LINE L1 -6274 1291 159 1321 57 36 5 chr10 18568199 18568393 -127020895 - L1PA15-16 LINE L1 -3927 2922 2723 1231 191 0 0 chr10 18568411 18568621 -127020667 - MER2 DNA MER2_type -135 210 1 429 324 21 14 chr10 18568903 18569193 -127020095 - L1M4 LINE L1 -2166 3980 3689 573 275 141 36 chr10 18570140 18570275 -127019013 - MLT1K LTR MaLR -115 473 354 2736 115 36 7 chr10 18570275 18570691 -127018597 - MSTA LTR MaLR 0 428 1 573 275 141 36 chr10 18570691 18570831 -127018457 - MLT1K LTR MaLR -234 354 169 1176 151 5 19 chr10 18571578 18571784 -127017504 - MLT1A1 LTR MaLR -162 203 1 350 321 15 15 chr10 18571894 18572025 -127017263 - L2 LINE L2 0 3272 3142 394 287 106 21 chr10 18573497 18573712 -127015576 + MIR SINE MIR 31 262 0 2260 125 33 39 chr10 18573932 18574292 -127014996 - THE1B LTR MaLR -6 358 1 1948 178 19 26 chr10 18574991 18575368 -127013920 - MSTD LTR MaLR -22 374 1 1345 229 55 20 chr10 18575371 18575769 -127013519 + L1MC/D LINE L1 5267 5678 -2130 237 253 102 121 chr10 18576248 18576414 -127012874 + MIR SINE MIR 29 191 -71 1014 170 42 0 chr10 18577584 18577796 -127011492 - L1MB4 LINE L1 0 6180 5960 380 217 12 0 chr10 18577796 18577879 -127011409 - L1MB4 LINE L1 -614 5566 5483 182 37 37 0 chr10 18577883 18577910 -127011378 + (TTG)n Simple_repeat Simple_repeat 2 29 0 1440 137 0 109 chr10 18577913 18578242 -127011046 - AluJb SINE Alu -9 293 1 1164 175 5 10 chr10 18578264 18578464 -127010824 - AluJb SINE Alu -8 304 106 1112 291 79 19 chr10 18578703 18579173 -127010115 - L2 LINE L2 -432 2882 2385 574 199 51 80 chr10 18579335 18579611 -127009677 + L1ME1 LINE L1 3684 3951 -2195 27 29 0 0 chr10 18579819 18579853 -127009435 + AT_rich Low_complexity Low_complexity 1 34 0 1672 171 0 8 chr10 18579974 18580237 -127009051 - AluSx SINE Alu -43 269 9 8651 106 18 18 chr10 18580247 18581741 -127007547 - L1M1 LINE L1 -4219 3346 1778 5645 159 23 1 chr10 18581886 18583437 -127005851 - L1MA3 LINE L1 -326 5979 4381 225 94 0 0 chr10 18583437 18583469 -127005819 + (TG)n Simple_repeat Simple_repeat 2 33 0 5645 159 23 1 chr10 18583469 18583623 -127005665 - L1MA3 LINE L1 -1924 4381 4232 3432 194 54 32 chr10 18583779 18584745 -127004543 + L1ME1 LINE L1 5158 6158 -8 281 81 0 0 chr10 18585030 18585067 -127004221 + L1MA2 LINE L1 6154 6190 -114 234 295 60 116 chr10 18585794 18586147 -127003141 + L2 LINE L2 2896 3228 -44 332 218 252 14 chr10 18586213 18586360 -127002928 + LTR50 LTR ERVL 82 263 -532 304 217 43 26 chr10 18586392 18586507 -127002781 - L1M4 LINE L1 -2946 3698 3582 258 189 27 54 chr10 18586534 18586608 -127002680 + LTR50 LTR ERVL 498 569 -226 283 272 74 0 chr10 18586762 18586843 -127002445 + LTR33A LTR ERVL 437 523 0 815 121 25 32 chr10 18586961 18587118 -127002170 + L1MA5 LINE L1 6123 6278 -22 423 253 0 0 chr10 18587139 18587309 -127001979 + (TA)n Simple_repeat Simple_repeat 1 170 0 40 0 0 0 chr10 18587356 18587396 -127001892 + AT_rich Low_complexity Low_complexity 1 40 0 3257 236 82 19 chr10 18587448 18588607 -127000681 + L1MC4a LINE L1 2319 3550 -2596 192 354 46 0 chr10 18589141 18589206 -127000082 - MIR SINE MIR -155 107 40 1017 239 141 25 chr10 18589236 18589634 -126999654 + MER113 DNA MER1_type? 34 477 -44 594 270 61 74 chr10 18590063 18590389 -126998899 + L1MC4a LINE L1 5609 5930 -1878 42 0 0 0 chr10 18590590 18590632 -126998656 + AT_rich Low_complexity Low_complexity 1 42 0 365 214 0 45 chr10 18590640 18590752 -126998536 - L1ME4a LINE L1 -59 6062 5956 1045 168 5 37 chr10 18591087 18591277 -126998011 - AluJb SINE Alu -11 301 118 835 121 0 0 chr10 18591288 18591404 -126997884 - FLAM_C SINE Alu -5 138 23 4949 207 27 34 chr10 18591534 18592600 -126996688 - L1M4 LINE L1 -5483 1059 1 1243 187 137 20 chr10 18593198 18593541 -126995747 + MER31B LTR ERV1 40 422 -44 2314 89 3 13 chr10 18593545 18593859 -126995429 + AluSp SINE Alu 1 311 -2 21 0 0 0 chr10 18593974 18593995 -126995293 + AT_rich Low_complexity Low_complexity 1 21 0 397 181 131 20 chr10 18594412 18594521 -126994767 + L1M LINE L1 5260 5383 -805 2147 112 7 26 chr10 18594521 18594824 -126994464 + AluSx SINE Alu 1 297 -15 397 181 131 20 chr10 18594824 18594835 -126994453 + L1M LINE L1 5383 5391 -797 2057 149 10 0 chr10 18595183 18595492 -126993796 + AluJb SINE Alu 1 312 0 194 275 0 72 chr10 18595850 18595919 -126993369 - L2 LINE L2 -213 3059 2996 2265 92 10 0 chr10 18596001 18596293 -126992995 + AluY SINE Alu 1 295 -16 1072 143 65 0 chr10 18596293 18596461 -126992827 + AluSg/x SINE Alu 132 310 0 1311 173 41 0 chr10 18596462 18596705 -126992583 + L1ME LINE L1 5320 5572 -594 1570 113 10 63 chr10 18597027 18597328 -126991960 + AluY SINE Alu 1 285 -16 3535 143 31 5 chr10 18597789 18598362 -126990926 - L1MB5 LINE L1 -8 6166 5579 213 300 64 36 chr10 18598686 18598796 -126990492 - L2 LINE L2 -1 3312 3200 217 240 20 0 chr10 18599793 18599843 -126989445 - MIR3 SINE MIR -11 197 147 192 237 0 0 chr10 18599811 18599849 -126989439 - L3b LINE CR1 -26 1557 1520 * 2048 145 9 29 chr10 18599861 18600205 -126989083 - MER1B DNA MER1_type -2 337 1 232 265 88 0 chr10 18600206 18600274 -126989014 - MIR SINE MIR -70 138 65 277 214 54 0 chr10 18600932 18600988 -126988300 + MER4-int LTR ERV1 1112 1170 -5428 439 333 0 0 chr10 18600988 18601111 -126988177 + (TG)n Simple_repeat Simple_repeat 2 124 0 6163 114 30 3 chr10 18601517 18602611 -126986677 + L1PA16 LINE L1 5026 6156 -10 2392 97 0 3 chr10 18602611 18602921 -126986367 + AluSq SINE Alu 1 309 -4 6163 114 30 3 chr10 18602921 18602933 -126986355 + L1PA16 LINE L1 6156 6166 0 26 0 0 0 chr10 18603021 18603047 -126986241 + AT_rich Low_complexity Low_complexity 1 26 0 363 302 83 10 chr10 18603110 18603302 -126985986 + L1M4 LINE L1 4279 4484 -1662 321 284 125 57 chr10 18603729 18603905 -126985383 - MIR SINE MIR -67 195 8 209 258 0 16 chr10 18604482 18604544 -126984744 + G-rich Low_complexity Low_complexity 2 62 0 1784 37 14 5 chr10 18606354 18606571 -126982717 + L1PA5 LINE L1 5936 6154 0 636 277 83 14 chr10 18606671 18606960 -126982328 - HAL1 LINE L1 -848 1659 1351 483 207 0 0 chr10 18607117 18607204 -126982084 + MER58B DNA MER1_type 1 87 -254 791 149 137 19 chr10 18607210 18607371 -126981917 + MSTA LTR MaLR 200 379 -49 1265 158 51 8 chr10 18607381 18607615 -126981673 + MER58B DNA MER1_type 97 340 -1 1290 146 124 41 chr10 18607695 18607962 -126981326 - AluJb SINE Alu -13 289 1 255 268 0 0 chr10 18608074 18608145 -126981143 - L1ME3A LINE L1 -25 6145 6075 447 191 113 9 chr10 18608149 18608264 -126981024 - L1ME3A LINE L1 -282 5888 5762 4351 211 66 11 chr10 18608405 18609637 -126979651 - L1MEc LINE L1 -2857 3358 2110 1380 150 22 22 chr10 18609644 18609911 -126979377 - AluSx SINE Alu -6 306 40 267 342 42 0 chr10 18611052 18611172 -126978116 + L2 LINE L2 2934 3058 -214 1633 269 71 4 chr10 18611924 18612459 -126976829 + L1ME3A LINE L1 5597 6167 -3 245 204 112 82 chr10 18613984 18614082 -126975206 + MIR SINE MIR 70 170 -92 2537 184 28 2 chr10 18614272 18614740 -126974548 + L1MB2 LINE L1 5690 6169 -2 1550 196 7 14 chr10 18614749 18615040 -126974248 + AluJb SINE Alu 2 290 -22 278 275 61 61 chr10 18615101 18615232 -126974056 + HAL1 LINE L1 6 136 -2371 184 242 0 0 chr10 18616132 18616165 -126973123 + L2 LINE L2 3219 3251 -21 289 203 0 72 chr10 18616330 18616399 -126972889 - L2 LINE L2 -9 3304 3241 891 139 7 0 chr10 18616652 18616789 -126972499 + FLAM_C SINE Alu 1 138 -5 2229 145 25 30 chr10 18617049 18617415 -126971873 + THE1B LTR MaLR 1 364 0 381 228 123 57 chr10 18618181 18618392 -126970896 - MER102b DNA MER1_type 0 341 117 253 238 55 85 chr10 18618448 18618612 -126970676 + MIR3 SINE MIR 29 187 -21 411 108 0 181 chr10 18619035 18619323 -126969965 - L1P LINE L1 -804 5342 5107 35373 91 11 15 chr10 18619331 18623552 -126965736 + L1P LINE L1 2 4202 -1944 279 0 0 0 chr10 18623552 18623583 -126965705 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 35373 91 11 15 chr10 18623583 18624501 -126964787 + L1P LINE L1 4202 5122 -1024 280 241 60 12 chr10 18624717 18624800 -126964488 + L2 LINE L2 2605 2691 -623 2212 133 0 0 chr10 18624912 18625221 -126964067 - AluSx SINE Alu -3 309 1 1647 162 7 42 chr10 18625508 18625817 -126963471 + AluJo SINE Alu 1 298 -14 806 146 7 15 chr10 18625822 18625959 -126963329 + AluJo SINE Alu 1 136 -176 4142 84 9 0 chr10 18625960 18626485 -126962803 + L1PA10 LINE L1 5634 6163 -5 767 152 64 0 chr10 18627239 18627364 -126961924 + FLAM_C SINE Alu 1 133 0 306 231 125 29 chr10 18627450 18627554 -126961734 + L2 LINE L2 3134 3247 -25 453 217 200 0 chr10 18627785 18627900 -126961388 - MER91C DNA MER1_type -2 138 1 738 244 85 10 chr10 18628014 18628215 -126961073 - MLT1J LTR MaLR -295 216 1 208 333 48 0 chr10 18628319 18628403 -126960885 + L2 LINE L2 2584 2671 -643 1952 131 0 31 chr10 18628545 18628858 -126960430 - AluSx SINE Alu 0 304 1 659 206 38 60 chr10 18629120 18629304 -126959984 + MLT1E2 LTR MaLR 1 180 -446 1388 142 0 0 chr10 18629310 18629507 -126959781 - AluSg/x SINE Alu -14 296 100 1126 124 6 17 chr10 18629512 18629690 -126959598 + THE1C LTR MaLR 200 375 0 256 289 22 22 chr10 18629864 18629954 -126959334 + L1MC/D LINE L1 4886 4975 -1171 411 285 166 57 chr10 18630205 18630294 -126958994 + L1MC/D LINE L1 5278 5356 -795 7594 48 10 0 chr10 18630294 18631424 -126957864 + L1PA7 LINE L1 5014 6154 0 411 285 166 57 chr10 18631424 18631702 -126957586 + L1MC/D LINE L1 5356 5683 -468 2353 92 0 0 chr10 18633682 18633977 -126955311 + AluSg SINE Alu 1 295 -15 2606 36 0 3 chr10 18635454 18635756 -126953532 + AluY SINE Alu 1 301 -10 390 257 153 0 chr10 18636367 18636511 -126952777 - MIR SINE MIR 0 262 97 337 115 33 16 chr10 18637287 18637379 -126951909 - Alu SINE Alu 0 331 239 393 39 0 0 chr10 18637858 18637909 -126951379 + (TG)n Simple_repeat Simple_repeat 1 51 0 2057 149 10 0 chr10 18637974 18638283 -126951005 - AluJb SINE Alu 0 312 1 2214 96 13 26 chr10 18638642 18638944 -126950344 - AluSq SINE Alu -15 298 1 2236 91 0 14 chr10 18639568 18639902 -126949386 + AluSq SINE Alu 1 330 0 833 205 81 91 chr10 18640035 18640342 -126948946 + L1MC4 LINE L1 7457 7760 -282 2985 109 12 2 chr10 18640346 18640767 -126948521 + MER57B LTR ERV1 10 434 0 1071 201 66 18 chr10 18640767 18641040 -126948248 + L1MC4 LINE L1 7757 8042 0 205 261 0 0 chr10 18641653 18641699 -126947589 + L2 LINE L2 3255 3300 -13 1145 153 137 46 chr10 18642208 18642470 -126946818 + MER4B LTR ERV1 1 286 -324 1607 116 8 25 chr10 18642470 18642674 -126946614 - AluSg/x SINE Alu -5 307 106 2066 171 108 35 chr10 18642674 18643130 -126946158 + LTR2B LTR ERV1 1 489 -1 1607 116 8 25 chr10 18643130 18643166 -126946122 - AluSg/x SINE Alu -206 106 71 2401 97 6 17 chr10 18643166 18643516 -126945772 + MER4E LTR ERV1 434 779 0 282 106 0 0 chr10 18644602 18644649 -126944639 + (CAT)n Simple_repeat Simple_repeat 1 47 0 1905 159 0 24 chr10 18644652 18644948 -126944340 - AluJo SINE Alu -23 289 1 1600 287 139 47 chr10 18645920 18646018 -126943270 - MER115 DNA AcHobo -8 685 597 2123 143 0 9 chr10 18646018 18646333 -126942955 - AluSx SINE Alu 0 312 1 1600 287 139 47 chr10 18646333 18646854 -126942434 - MER115 DNA AcHobo -96 597 9 196 243 106 87 chr10 18647273 18647335 -126941953 + MIR3 SINE MIR 7 66 -187 2238 125 0 0 chr10 18647335 18647640 -126941648 - AluSx SINE Alu -7 305 1 196 243 106 87 chr10 18647640 18647714 -126941574 + MIR3 SINE MIR 66 160 -93 1600 134 115 7 chr10 18648279 18648548 -126940740 + AluSg1 SINE Alu 2 299 -10 2137 126 3 0 chr10 18648680 18648973 -126940315 - AluSq SINE Alu -19 294 1 1199 127 6 6 chr10 18650030 18650203 -126939085 - AluSc SINE Alu -11 298 126 2471 93 0 0 chr10 18650206 18650517 -126938771 - AluSx SINE Alu -1 311 1 1197 154 20 36 chr10 18651130 18651377 -126937911 + AluJo SINE Alu 67 309 -3 1956 110 46 7 chr10 18652514 18652796 -126936492 - AluSx SINE Alu -19 293 1 2302 115 0 0 chr10 18653336 18653648 -126935640 + AluJb SINE Alu 1 312 0 249 202 55 73 chr10 18653662 18653771 -126935517 + L1ME4a LINE L1 5997 6103 -18 270 195 6 0 chr10 18653774 18653830 -126935458 + Alu SINE Alu 1 39 -262 180 264 308 0 chr10 18653830 18653921 -126935367 + L2 LINE L2 3135 3253 -60 373 366 48 52 chr10 18655151 18655628 -126933660 + L2 LINE L2 2570 3044 -228 1937 115 52 0 chr10 18655676 18655984 -126933304 - AluSx SINE Alu 0 322 1 315 264 207 0 chr10 18656170 18656310 -126932978 + L2 LINE L2 3117 3285 -28 233 336 19 19 chr10 18656373 18656392 -126932896 + L2 LINE L2 3168 3186 -86 2434 90 0 0 chr10 18656392 18656692 -126932596 - AluSx SINE Alu -12 300 1 233 336 19 19 chr10 18656692 18656776 -126932512 + L2 LINE L2 3185 3271 -1 2144 114 0 3 chr10 18657431 18657729 -126931559 - AluSx SINE Alu -15 297 1 1595 106 66 4 chr10 18657897 18658153 -126931135 - L1MA8 LINE L1 -5 6286 6015 2301 95 0 0 chr10 18658251 18658546 -126930742 - AluSx SINE Alu -17 295 1 1171 164 16 62 chr10 18659455 18659562 -126929726 + L1MB3 LINE L1 5683 5793 -390 2475 50 17 3 chr10 18659562 18659863 -126929425 + AluY SINE Alu 1 305 -6 1171 164 16 62 chr10 18659863 18659999 -126929289 + L1MB3 LINE L1 5793 5915 -268 1842 151 0 3 chr10 18660080 18660365 -126928923 - AluJb SINE Alu -28 284 1 1277 139 13 21 chr10 18660365 18660602 -126928686 + L1MB3 LINE L1 5908 6142 -41 2264 117 0 0 chr10 18660602 18660902 -126928386 + AluSx SINE Alu 1 300 -12 2185 136 0 0 chr10 18661031 18661339 -126927949 + AluSx SINE Alu 1 308 -4 1092 186 36 5 chr10 18661339 18661559 -126927729 + AluJo SINE Alu 86 312 0 683 217 114 53 chr10 18661864 18662163 -126927125 + Charlie7 DNA MER1_type 323 639 -1973 471 211 62 16 chr10 18662183 18662311 -126926977 - MIR SINE MIR -20 242 109 299 188 0 0 chr10 18662369 18662417 -126926871 + Charlie7 DNA MER1_type 642 689 -1923 288 242 0 44 chr10 18662430 18662521 -126926767 + Charlie7 DNA MER1_type 2525 2611 -1 227 302 70 39 chr10 18662526 18662655 -126926633 - MIR3 SINE MIR -73 135 3 1532 171 3 58 chr10 18663378 18663687 -126925601 - AluJo SINE Alu -20 292 1 366 197 40 0 chr10 18663697 18663773 -126925515 - L1MC5 LINE L1 -723 7238 7160 268 358 17 17 chr10 18663825 18663865 -126925423 + Tigger8 DNA MER2_type 2 41 -625 1943 135 36 0 chr10 18663865 18664146 -126925142 - AluSx SINE Alu -21 291 1 268 358 17 17 chr10 18664146 18664225 -126925063 + Tigger8 DNA MER2_type 40 121 -545 2196 197 22 78 chr10 18664290 18664515 -126924773 + L1ME LINE L1 5119 5355 -811 2394 84 3 0 chr10 18664515 18664812 -126924476 - AluY SINE Alu -13 298 1 2196 197 22 78 chr10 18664812 18665095 -126924193 + L1ME LINE L1 5355 5590 -576 1777 137 4 11 chr10 18665095 18665373 -126923915 + AluSx SINE Alu 37 312 0 2196 197 22 78 chr10 18665373 18665587 -126923701 + L1ME LINE L1 5590 5814 -352 1823 139 57 0 chr10 18665727 18666007 -126923281 + AluJb SINE Alu 1 296 -16 563 305 45 0 chr10 18666032 18666209 -126923079 - MIR SINE MIR 0 262 78 2252 74 23 3 chr10 18666357 18666656 -126922632 - AluY SINE Alu -6 305 1 2516 57 0 3 chr10 18667044 18667340 -126921948 + AluY SINE Alu 1 295 -16 789 189 8 0 chr10 18667351 18667483 -126921805 + FLAM_A SINE Alu 1 133 0 423 282 68 48 chr10 18667791 18667997 -126921291 - L2 LINE L2 -101 3212 3003 2357 74 3 6 chr10 18667998 18668310 -126920978 + AluY SINE Alu 1 311 0 450 0 0 0 chr10 18668457 18668507 -126920781 + (TG)n Simple_repeat Simple_repeat 2 51 0 811 174 0 0 chr10 18668507 18668628 -126920660 - FLAM_A SINE Alu -9 124 4 666 165 128 0 chr10 18669521 18669630 -126919658 + FLAM_C SINE Alu 2 124 -19 238 336 92 0 chr10 18669954 18670073 -126919215 - L1ME LINE L1 -5610 460 331 1993 101 7 28 chr10 18670735 18671061 -126918227 - AluY SINE Alu 0 320 1 530 238 138 24 chr10 18671213 18671423 -126917865 + MIR SINE MIR 16 249 -13 656 138 0 60 chr10 18671573 18671689 -126917599 + FLAM_C SINE Alu 25 133 -10 2075 117 0 3 chr10 18671694 18671992 -126917296 + AluSx SINE Alu 1 297 -15 2357 69 10 3 chr10 18672000 18672305 -126916983 + AluY SINE Alu 5 311 0 180 0 0 0 chr10 18672654 18672674 -126916614 + (A)n Simple_repeat Simple_repeat 1 20 0 318 270 161 78 chr10 18672754 18673392 -126915896 + L1M2 LINE L1 543 1233 -5616 23 68 0 0 chr10 18673408 18673452 -126915836 + GC_rich Low_complexity Low_complexity 1 44 0 761 208 52 13 chr10 18673769 18673923 -126915365 - FRAM SINE Alu -6 160 1 210 150 0 0 chr10 18674042 18674082 -126915206 + (T)n Simple_repeat Simple_repeat 1 40 0 1950 86 8 4 chr10 18674083 18674340 -126914948 - AluSx SINE Alu -54 258 1 369 58 0 0 chr10 18674365 18674417 -126914871 + (TG)n Simple_repeat Simple_repeat 2 53 0 876 95 44 14 chr10 18674429 18674575 -126914713 + LTR7 LTR ERV1 1 199 -251 301 197 53 40 chr10 18674597 18674673 -126914615 + MIR SINE MIR 55 131 -131 553 113 12 0 chr10 18674695 18674775 -126914513 + AluS SINE Alu 222 302 -7 2248 115 3 0 chr10 18674779 18675084 -126914204 + AluSx SINE Alu 1 306 -6 2995 214 121 38 chr10 18675084 18676146 -126913142 + L1ME1 LINE L1 4180 5466 -700 2320 108 0 0 chr10 18676146 18676452 -126912836 + AluSq SINE Alu 1 306 -7 2995 214 121 38 chr10 18676452 18677151 -126912137 + L1ME1 LINE L1 5466 6105 -61 2068 114 21 0 chr10 18677156 18677446 -126911842 + AluSx SINE Alu 1 296 -16 21 36 0 0 chr10 18677488 18677516 -126911772 + AT_rich Low_complexity Low_complexity 1 28 0 469 260 143 0 chr10 18677961 18678115 -126911173 - MIR SINE MIR -66 196 21 201 365 138 0 chr10 18678193 18678352 -126910936 - L2 LINE L2 -202 3070 2890 2112 122 3 0 chr10 18678506 18678794 -126910494 + AluSx SINE Alu 1 289 -23 2054 69 77 0 chr10 18678993 18679289 -126909999 + AluY SINE Alu 1 311 0 2281 118 0 10 chr10 18679290 18679604 -126909684 - L1PB3 LINE L1 -14 6140 5830 1826 142 52 0 chr10 18679791 18680080 -126909208 - AluSx SINE Alu -8 304 1 1718 221 46 67 chr10 18680929 18681241 -126908047 - L1ME1 LINE L1 -5 6230 5913 685 203 10 99 chr10 18681241 18681312 -126907976 + MER45A DNA AcHobo 4 80 -1501 2169 120 0 0 chr10 18681312 18681613 -126907675 + AluY SINE Alu 1 301 -10 685 203 10 99 chr10 18681613 18681733 -126907555 + MER45A DNA AcHobo 80 178 0 1718 221 46 67 chr10 18681733 18681928 -126907360 - L1ME1 LINE L1 -322 5913 5736 756 185 8 0 chr10 18681928 18682058 -126907230 + FLAM_C SINE Alu 2 132 -1 1718 221 46 67 chr10 18682058 18682159 -126907129 - L1ME1 LINE L1 -499 5736 5634 2352 78 3 0 chr10 18682160 18682453 -126906835 - AluY SINE Alu -17 294 1 1202 140 95 0 chr10 18682775 18683019 -126906269 - L1ME1 LINE L1 -594 5641 5448 1457 146 43 94 chr10 18683019 18683347 -126905941 - AluJo SINE Alu -1 311 1 2072 108 0 11 chr10 18683349 18683635 -126905653 - AluSg SINE Alu -19 291 9 1202 140 95 0 chr10 18683635 18683771 -126905517 - L1ME1 LINE L1 -787 5448 5276 661 164 86 0 chr10 18683776 18683892 -126905396 - FLAM_C SINE Alu -5 138 13 1713 223 20 9 chr10 18683900 18684353 -126904935 - L1ME1 LINE L1 -951 5264 4807 6551 39 6 15 chr10 18684355 18685153 -126904135 - SVA Other Other 0 1386 596 212 175 0 53 chr10 18685229 18685286 -126904002 + T-rich Low_complexity Low_complexity 1 54 0 4353 69 53 63 chr10 18685585 18686314 -126902974 - SVA Other Other -520 866 145 12840 88 65 5 chr10 18686349 18688367 -126900921 - HERVH LTR ERV1 -5574 2139 1 688 86 0 19 chr10 18688369 18688474 -126900814 - LTR7 LTR ERV1 -2 448 346 2229 106 0 7 chr10 18688804 18689105 -126900183 + AluSx SINE Alu 1 299 -13 261 282 0 64 chr10 18689229 18689307 -126899981 - MIR3 SINE MIR -28 180 108 378 153 203 51 chr10 18690218 18690336 -126898952 - Charlie2 DNA MER1_type -2 2860 2725 2496 257 22 39 chr10 18690534 18690623 -126898665 - L1ME1 LINE L1 -2605 3610 3521 925 115 0 0 chr10 18690623 18690753 -126898535 + FLAM_C SINE Alu 1 130 -3 2496 257 22 39 chr10 18690753 18691792 -126897496 - L1ME1 LINE L1 -2694 3521 2501 3067 268 56 79 chr10 18691796 18692504 -126896784 - L1ME1 LINE L1 -4025 2371 1648 309 119 0 34 chr10 18692504 18692563 -126896725 + MER2 DNA MER2_type 23 79 -266 3067 268 56 79 chr10 18692563 18692905 -126896383 - L1ME1 LINE L1 -4748 1648 1300 2243 65 3 55 chr10 18692905 18693212 -126896076 - AluSp SINE Alu -22 291 1 3067 268 56 79 chr10 18693212 18693425 -126895863 - L1ME1 LINE L1 -5096 1300 1084 2453 59 0 19 chr10 18693425 18693732 -126895556 - AluY SINE Alu -10 301 1 3067 268 56 79 chr10 18693732 18694438 -126894850 - L1ME1 LINE L1 -5312 1084 403 2291 94 3 3 chr10 18694438 18694736 -126894552 - AluSq SINE Alu -15 298 1 3067 268 56 79 chr10 18694736 18695097 -126894191 - L1ME1 LINE L1 -5993 403 35 23 33 0 0 chr10 18695100 18695130 -126894158 + AT_rich Low_complexity Low_complexity 1 30 0 887 284 97 15 chr10 18695230 18695698 -126893590 + MLT1G1 LTR MaLR 1 557 -38 2403 83 3 0 chr10 18695716 18696016 -126893272 - AluSp SINE Alu -10 303 3 217 286 0 0 chr10 18696089 18696138 -126893150 - L2 LINE L2 -10 3303 3255 330 298 76 19 chr10 18696407 18696565 -126892723 + L2 LINE L2 3147 3313 0 261 362 52 33 chr10 18696559 18696672 -126892616 - L2 LINE L2 -547 2767 2647 * 1487 233 19 21 chr10 18696672 18697046 -126892242 - MLT1A2 LTR MaLR 0 374 2 261 362 52 33 chr10 18697046 18697142 -126892146 - L2 LINE L2 -667 2647 2554 2269 110 0 3 chr10 18697293 18697603 -126891685 - AluSx SINE Alu -3 309 1 38 22 0 0 chr10 18697870 18697915 -126891373 + AT_rich Low_complexity Low_complexity 1 45 0 344 212 82 41 chr10 18698424 18698570 -126890718 - L1ME4a LINE L1 -2 6119 5968 684 167 147 13 chr10 18698741 18698891 -126890397 - MIR SINE MIR -11 251 82 346 286 82 27 chr10 18698896 18699121 -126890167 - L1ME4a LINE L1 -433 5688 5503 1651 48 19 5 chr10 18699164 18699373 -126889915 - AluSx SINE Alu -100 212 1 183 42 0 0 chr10 18701433 18701457 -126887831 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 264 301 120 36 chr10 18701739 18701935 -126887353 + MIR SINE MIR 34 252 -10 873 231 23 14 chr10 18702497 18702713 -126886575 - MER20 DNA MER1_type -1 218 1 21 36 0 0 chr10 18703296 18703324 -126885964 + AT_rich Low_complexity Low_complexity 1 28 0 537 240 8 16 chr10 18703377 18703502 -126885786 + L2 LINE L2 3190 3313 0 542 268 174 13 chr10 18703578 18703813 -126885475 + L2 LINE L2 1888 2160 -1154 852 228 36 36 chr10 18703847 18704071 -126885217 + MIR SINE MIR 2 225 -37 1035 315 11 14 chr10 18704101 18704463 -126884825 + L2 LINE L2 2185 2545 -769 1661 143 25 7 chr10 18704468 18704748 -126884540 + LTR12 LTR ERV1 1 285 -429 350 200 11 0 chr10 18704749 18704839 -126884449 + LTR30 LTR ERV1 553 643 -79 567 139 0 0 chr10 18704840 18704926 -126884362 + LTR12 LTR ERV1 481 566 -148 752 311 118 35 chr10 18704926 18705435 -126883853 + L2 LINE L2 2540 3125 -188 1744 163 36 7 chr10 18705435 18705736 -126883552 + AluJo SINE Alu 1 310 -2 752 311 118 35 chr10 18705736 18705942 -126883346 + L2 LINE L2 3125 3313 0 774 154 0 8 chr10 18706104 18706227 -126883061 - AluSq/x SINE Alu -190 122 1 198 313 21 21 chr10 18706583 18706679 -126882609 + MIR SINE MIR 107 202 -60 388 346 110 53 chr10 18706700 18707097 -126882191 + L2 LINE L2 2318 2754 -560 2596 65 0 0 chr10 18707097 18707405 -126881883 + AluY SINE Alu 1 308 -3 388 346 110 53 chr10 18707405 18707536 -126881752 + L2 LINE L2 2754 2876 -438 310 239 91 11 chr10 18707607 18707695 -126881593 + MIR SINE MIR 162 256 -6 427 327 40 55 chr10 18709259 18709534 -126879754 + MER21B LTR ERV1 32 302 -561 * 761 206 0 0 chr10 18709533 18709693 -126879595 + ALR/Alpha Satellite centromeric 1 160 -12 469 267 58 58 chr10 18709833 18709853 -126879435 + MER21B LTR ERV1 471 490 -441 1422 193 48 12 chr10 18709853 18710185 -126879103 - MER2 DNA MER2_type 0 344 1 469 267 58 58 chr10 18710185 18710441 -126878847 + MER21B LTR ERV1 489 780 -151 2333 70 0 0 chr10 18710525 18710841 -126878447 - AluY SINE Alu 0 316 1 768 227 33 93 chr10 18712229 18712347 -126876941 - HAL1 LINE L1 -1534 973 849 2227 87 3 3 chr10 18712347 18712634 -126876654 + AluY SINE Alu 16 302 -9 768 227 33 93 chr10 18712634 18712881 -126876407 - HAL1 LINE L1 -1658 849 630 446 204 0 20 chr10 18712889 18712987 -126876301 - L1MEc LINE L1 -2309 4117 4022 2321 190 91 57 chr10 18712987 18713688 -126875600 - MER50 LTR ERV1 0 734 10 3616 222 46 18 chr10 18713689 18714828 -126874460 - L1MEc LINE L1 -2396 4030 2860 1563 147 124 8 chr10 18714841 18715106 -126874182 - AluJb SINE Alu -16 296 1 3368 166 25 40 chr10 18715106 18715783 -126873505 - L1MEc LINE L1 -3948 2478 1938 1733 167 27 10 chr10 18715783 18716082 -126873206 - AluJo SINE Alu -8 304 1 3368 166 25 40 chr10 18716082 18716298 -126872990 - L1MEc LINE L1 -4488 1938 1720 21 0 0 0 chr10 18716515 18716536 -126872752 + AT_rich Low_complexity Low_complexity 1 21 0 945 191 0 0 chr10 18716924 18717092 -126872196 + FAM SINE Alu 1 168 -7 214 331 194 21 chr10 18717683 18718018 -126871270 + L2 LINE L2 2076 2468 -846 793 256 40 18 chr10 18718915 18719138 -126870150 + MIR SINE MIR 6 233 -29 220 217 0 22 chr10 18719847 18719893 -126869395 + CT-rich Low_complexity Low_complexity 1 45 0 1152 159 53 4 chr10 18720220 18720465 -126868823 + ORSL DNA AcHobo 2 258 -17 672 174 162 0 chr10 18720594 18720761 -126868527 - L1MB3 LINE L1 -9 6174 5981 29 28 0 0 chr10 18720782 18720818 -126868470 + AT_rich Low_complexity Low_complexity 1 36 0 189 107 0 0 chr10 18721556 18721584 -126867704 + (CATATA)n Simple_repeat Simple_repeat 6 33 0 312 262 303 20 chr10 18721609 18721853 -126867435 - L1MC4a LINE L1 -1635 6173 5861 2455 74 0 10 chr10 18722707 18723016 -126866272 - AluY SINE Alu -5 306 1 278 333 91 8 chr10 18723253 18723385 -126865903 - MIR SINE MIR 0 262 120 2050 126 17 0 chr10 18723448 18723741 -126865547 - AluSq SINE Alu -15 298 1 392 301 57 53 chr10 18723853 18724062 -126865226 - L2 LINE L2 -20 3293 3084 1046 251 178 11 chr10 18724258 18724617 -126864671 - L2 LINE L2 -2414 900 482 2895 175 50 38 chr10 18724651 18725367 -126863921 - L1MC2 LINE L1 -55 6289 5565 368 311 105 20 chr10 18725372 18725983 -126863305 - L1MC2 LINE L1 -1115 5031 4369 1913 93 20 96 chr10 18726006 18726349 -126862939 - AluYb8 SINE Alu -1 317 1 391 309 0 25 chr10 18726349 18726511 -126862777 - L2 LINE L2 -1600 1714 1557 364 301 98 30 chr10 18726630 18726763 -126862525 - MIR3 SINE MIR -63 145 4 186 252 243 0 chr10 18727676 18727783 -126861505 - MIR SINE MIR -3 259 127 249 239 0 0 chr10 18730037 18730083 -126859205 + MIR SINE MIR 5 50 -212 188 367 0 0 chr10 18730085 18730145 -126859143 + MIR SINE MIR 201 260 -2 688 233 133 79 chr10 18730573 18731120 -126858168 - MLT1G1 LTR MaLR 0 567 4 2124 136 3 0 chr10 18731542 18731837 -126857451 + AluSx SINE Alu 1 296 -16 447 284 18 0 chr10 18731969 18732078 -126857210 + L2 LINE L2 3150 3260 -12 325 320 0 8 chr10 18732942 18733070 -126856218 - MER94 DNA DNA -4 130 4 26 30 0 0 chr10 18733201 18733234 -126856054 + AT_rich Low_complexity Low_complexity 1 33 0 212 231 0 0 chr10 18734019 18734058 -126855230 + L2 LINE L2 3263 3301 -12 1491 182 38 40 chr10 18734299 18734580 -126854708 - L1MB7 LINE L1 -25 6159 5878 2020 126 7 10 chr10 18734580 18734873 -126854415 - AluSx SINE Alu -20 292 1 1491 182 38 40 chr10 18734873 18734938 -126854350 - L1MB7 LINE L1 -306 5878 5814 * 3575 177 84 21 chr10 18734929 18735884 -126853404 - L1MB2 LINE L1 -4 6167 5148 1088 213 36 115 chr10 18735914 18736530 -126852758 - L1MB2 LINE L1 -2559 3587 3021 * 3429 138 98 44 chr10 18736515 18736736 -126852552 - L1MB3 LINE L1 -1 6182 5974 1626 186 59 3 chr10 18736736 18737026 -126852262 - AluJo SINE Alu -6 306 1 3429 138 98 44 chr10 18737026 18737507 -126851781 - L1MB3 LINE L1 -209 5974 5442 844 245 69 8 chr10 18737520 18737895 -126851393 - L1MB2 LINE L1 -3104 3042 2645 1114 224 162 13 chr10 18739188 18739640 -126849648 - L1ME2 LINE L1 -3 6232 5723 1402 264 44 6 chr10 18739690 18740190 -126849098 - L1ME2 LINE L1 -3265 2950 2432 1396 198 21 11 chr10 18740489 18740772 -126848516 - AluJb SINE Alu -22 290 5 567 266 149 17 chr10 18740833 18741236 -126848052 - L1ME2 LINE L1 -5215 1181 726 21 0 0 0 chr10 18741855 18741876 -126847412 + AT_rich Low_complexity Low_complexity 1 21 0 1370 122 18 62 chr10 18742692 18743117 -126846171 - LTR42 LTR ERVL -11 484 1 2076 117 3 10 chr10 18743693 18743991 -126845297 - AluSg SINE Alu -14 296 1 1936 116 12 61 chr10 18744507 18744834 -126844454 + AluSx SINE Alu 1 311 -1 1847 139 7 7 chr10 18745776 18746077 -126843211 - AluSx SINE Alu -11 301 1 531 258 174 7 chr10 18747068 18747223 -126842065 + MER5A DNA MER1_type 9 189 0 781 216 36 21 chr10 18747340 18747534 -126841754 - MIR3 SINE MIR -9 199 3 2356 55 0 0 chr10 18748551 18748826 -126840462 + AluY SINE Alu 1 275 -36 216 0 0 0 chr10 18748826 18748850 -126840438 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 292 264 9 5 chr10 18748935 18749044 -126840244 - L2 LINE L2 -1 3271 3115 216 184 20 0 chr10 18749055 18749104 -126840184 - MIR SINE MIR -15 247 198 246 283 157 26 chr10 18749132 18749323 -126839965 - L1MDa LINE L1 -4179 2361 2146 691 236 25 19 chr10 18749398 18749555 -126839733 - MIR SINE MIR -92 170 13 447 329 123 18 chr10 18750914 18751419 -126837869 - L1MC4a LINE L1 -1914 5894 5337 400 352 53 11 chr10 18751438 18751702 -126837586 - L1MC4a LINE L1 -861 5285 5011 1211 179 54 8 chr10 18753160 18753468 -126835820 - MLT1A1 LTR MaLR 0 365 8 2006 88 0 33 chr10 18754269 18754543 -126834745 - AluSq SINE Alu -48 265 1 25 0 0 0 chr10 18755083 18755108 -126834180 + AT_rich Low_complexity Low_complexity 1 25 0 26 30 0 0 chr10 18756027 18756060 -126833228 + AT_rich Low_complexity Low_complexity 1 33 0 23 33 0 0 chr10 18757690 18757720 -126831568 + AT_rich Low_complexity Low_complexity 1 30 0 426 326 132 10 chr10 18757792 18758096 -126831192 - L1ME LINE L1 -297 5824 5484 901 194 148 5 chr10 18758736 18758932 -126830356 + MER58A DNA MER1_type 1 224 0 741 275 18 18 chr10 18758932 18759153 -126830135 + Charlie2 DNA MER1_type 68 288 -2494 922 220 153 3 chr10 18759177 18759459 -126829829 + Charlie2 DNA MER1_type 1855 2178 -684 * 1092 231 176 12 chr10 18759457 18759947 -126829341 + Charlie2 DNA MER1_type 2287 2856 -6 2333 100 0 3 chr10 18760042 18760352 -126828936 + AluSg SINE Alu 1 309 -1 21 0 0 0 chr10 18760735 18760756 -126828532 + AT_rich Low_complexity Low_complexity 1 21 0 830 163 0 0 chr10 18761411 18761540 -126827748 - FRAM SINE Alu -16 160 32 1592 156 22 18 chr10 18763105 18763407 -126825881 + AluJb SINE Alu 6 308 0 269 235 90 57 chr10 18763585 18763686 -126825602 + MER5A DNA MER1_type 18 127 -51 1325 226 0 3 chr10 18763686 18763991 -126825297 - AluY SINE Alu -5 306 3 269 235 90 57 chr10 18763991 18764045 -126825243 + MER5A DNA MER1_type 127 178 0 2292 84 0 3 chr10 18764442 18764763 -126824525 + AluY SINE Alu 1 311 0 2130 78 29 46 chr10 18765193 18765500 -126823788 - AluY SINE Alu -8 303 2 23 33 0 0 chr10 18765799 18765829 -126823459 + AT_rich Low_complexity Low_complexity 1 30 0 2041 173 34 32 chr10 18766357 18766905 -126822383 + MLT2A2 LTR ERVL 1 554 0 48 88 0 0 chr10 18767386 18767511 -126821777 + AT_rich Low_complexity Low_complexity 1 125 0 1089 120 20 0 chr10 18767566 18767716 -126821572 - AluSg/x SINE Alu -16 294 142 317 24 0 0 chr10 18767716 18767757 -126821531 + MADE1 DNA Mariner 40 80 0 24 32 0 0 chr10 18767757 18767788 -126821500 + AT_rich Low_complexity Low_complexity 1 31 0 1743 126 59 0 chr10 18768216 18768486 -126820802 - AluSx SINE Alu -20 292 7 371 260 104 46 chr10 18768953 18769126 -126820162 - MIR SINE MIR -3 259 77 1877 168 3 0 chr10 18769257 18769555 -126819733 - AluJo SINE Alu -13 299 1 2333 87 3 0 chr10 18770219 18770517 -126818771 + AluSq SINE Alu 1 299 -14 1884 152 18 18 chr10 18770704 18771039 -126818249 - MER1B DNA MER1_type 0 337 3 1148 100 6 0 chr10 18772018 18772178 -126817110 - L1PA10 LINE L1 -5 6163 6003 531 261 133 18 chr10 18772322 18772548 -126816740 - MIR SINE MIR -1 261 10 206 32 32 0 chr10 18772753 18772784 -126816504 + (TTTG)n Simple_repeat Simple_repeat 4 35 0 1923 122 37 0 chr10 18772784 18773054 -126816234 - AluSx SINE Alu -32 280 1 243 61 0 0 chr10 18773244 18773277 -126816011 + (TG)n Simple_repeat Simple_repeat 2 34 0 24 0 0 0 chr10 18773601 18773625 -126815663 + AT_rich Low_complexity Low_complexity 1 24 0 564 193 13 2 chr10 18774008 18774028 -126815260 + MER58A DNA MER1_type 30 48 -2372 2492 52 0 23 chr10 18774028 18774337 -126814951 - AluY SINE Alu -8 303 2 564 193 13 2 chr10 18774337 18774475 -126814813 + MER58A DNA MER1_type 48 224 0 287 348 62 48 chr10 18776643 18776933 -126812355 + L2 LINE L2 2976 3269 -3 198 217 43 0 chr10 18777535 18777581 -126811707 - L2 LINE L2 -20 3252 3205 21 0 0 0 chr10 18777627 18777648 -126811640 + AT_rich Low_complexity Low_complexity 1 21 0 655 268 143 0 chr10 18778263 18778487 -126810801 - MIR SINE MIR 0 262 7 213 276 17 0 chr10 18778887 18778945 -126810343 - L2 LINE L2 -1484 1830 1772 210 273 151 29 chr10 18778961 18779133 -126810155 - L2 LINE L2 -1744 1570 1378 * 1269 279 116 74 chr10 18779128 18780447 -126808841 + L2 LINE L2 1847 3222 -91 209 286 0 0 chr10 18780542 18780591 -126808697 + L2 LINE L2 3220 3268 -4 222 118 0 0 chr10 18781537 18781571 -126807717 + (TA)n Simple_repeat Simple_repeat 2 35 0 751 268 47 37 chr10 18782479 18782778 -126806510 + AluSp SINE Alu 2 303 0 1416 174 10 84 chr10 18783364 18783675 -126805613 - AluJo SINE Alu -24 288 1 2249 113 0 7 chr10 18784711 18785012 -126804276 + AluSx SINE Alu 1 299 -13 2335 101 3 0 chr10 18785373 18785670 -126803618 + AluSx SINE Alu 3 300 -12 1961 152 0 10 chr10 18786300 18786603 -126802685 - AluJb SINE Alu -12 300 1 2288 98 3 19 chr10 18786966 18787144 -126802144 - AluSx SINE Alu 0 312 140 2141 110 3 35 chr10 18787144 18787461 -126801827 - AluSq SINE Alu -6 307 1 2288 98 3 19 chr10 18787461 18787599 -126801689 - AluSx SINE Alu -172 140 1 184 296 80 0 chr10 18787923 18788011 -126801277 + MIR3 SINE MIR 108 202 -6 2180 130 0 0 chr10 18788704 18789005 -126800283 - AluSx SINE Alu -11 301 1 242 29 29 0 chr10 18789054 18789089 -126800199 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 544 96 0 12 chr10 18789093 18789176 -126800112 - L1PA13 LINE L1 -19 6144 6063 1094 141 13 0 chr10 18789176 18789332 -126799956 - AluSx SINE Alu -154 158 1 4618 86 5 0 chr10 18789420 18790022 -126799266 - L1PA12 LINE L1 -44 6124 5520 1856 158 0 20 chr10 18790452 18790755 -126798533 - AluJb SINE Alu -5 307 11 2098 102 0 41 chr10 18791063 18791389 -126797899 - AluSq SINE Alu 0 314 1 1684 147 51 17 chr10 18792123 18792416 -126796872 + AluJo SINE Alu 1 303 -9 2118 125 3 0 chr10 18792439 18792734 -126796554 - AluSx SINE Alu -16 296 1 297 326 0 23 chr10 18792774 18792906 -126796382 - MIR SINE MIR -132 130 2 375 226 49 123 chr10 18793302 18793454 -126795834 - MIR SINE MIR -40 222 87 1805 171 3 7 chr10 18793454 18793753 -126795535 + AluJo SINE Alu 1 298 -14 375 226 49 123 chr10 18793753 18793804 -126795484 - MIR SINE MIR -175 87 34 2047 141 0 10 chr10 18793892 18794197 -126795091 - AluSx SINE Alu 0 312 11 457 356 24 10 chr10 18794568 18794776 -126794512 + MIR SINE MIR 41 251 -11 208 196 18 18 chr10 18795017 18795073 -126794215 + (TTATG)n Simple_repeat Simple_repeat 4 59 0 437 323 90 0 chr10 18795718 18795907 -126793381 - MIR SINE MIR 0 262 57 1909 39 0 13 chr10 18795917 18796150 -126793138 + AluY SINE Alu 81 310 -1 2795 88 3 0 chr10 18796784 18797147 -126792141 - THE1B LTR MaLR 0 364 1 2288 111 0 3 chr10 18797549 18797855 -126791433 + AluSx SINE Alu 1 305 -7 251 314 83 0 chr10 18798370 18798491 -126790797 - L3 LINE CR1 -342 1235 1105 185 266 127 13 chr10 18798624 18798703 -126790585 - L3 LINE CR1 -972 605 518 565 92 20 0 chr10 18798713 18798811 -126790477 + (TA)n Simple_repeat Simple_repeat 2 101 0 1629 171 55 0 chr10 18798816 18799091 -126790197 - AluJo SINE Alu -22 290 1 1055 167 142 54 chr10 18799346 18799586 -126789702 + AluJo SINE Alu 39 299 -13 504 261 72 43 chr10 18799928 18800135 -126789153 + MIR SINE MIR 2 214 -48 2081 168 28 91 chr10 18800649 18800969 -126788319 - MLT1C LTR MaLR 0 467 187 1995 124 38 7 chr10 18800969 18801259 -126788029 - AluSc SINE Alu -10 299 1 2081 168 28 91 chr10 18801259 18801433 -126787855 - MLT1C LTR MaLR -280 187 4 4833 198 67 76 chr10 18801437 18802818 -126786470 - MLT1C-int LTR MaLR -1 1370 2 2164 187 34 55 chr10 18802826 18803297 -126785991 - MLT1C LTR MaLR -6 461 1 2418 87 0 0 chr10 18803320 18803630 -126785658 + AluSg SINE Alu 1 310 0 1733 143 56 4 chr10 18805393 18805659 -126783629 - AluJo SINE Alu -32 280 1 315 325 32 0 chr10 18805689 18805815 -126783473 - L2 LINE L2 0 3272 3143 2154 132 3 3 chr10 18805892 18806188 -126783100 + AluSx SINE Alu 3 298 -14 4710 183 46 16 chr10 18806869 18808732 -126780556 - L1MB4 LINE L1 -10 6406 4487 537 107 49 0 chr10 18808734 18808856 -126780432 + (TG)n Simple_repeat Simple_repeat 2 129 0 738 214 6 13 chr10 18808856 18809015 -126780273 - L1MB4 LINE L1 -1893 4489 4332 361 271 156 44 chr10 18809022 18809247 -126780041 - L1MB4 LINE L1 -6022 362 113 1959 170 14 24 chr10 18809247 18809445 -126779843 + MER47A DNA MER2_type 1 195 -2128 3070 168 54 87 chr10 18809445 18810257 -126779031 - LTR1 LTR ERV1 0 785 1 1959 170 14 24 chr10 18810257 18810428 -126778860 + MER47A DNA MER2_type 195 366 0 307 317 0 10 chr10 18810429 18810530 -126778758 - L1MB4 LINE L1 -6271 113 14 2255 106 0 0 chr10 18810730 18811023 -126778265 + AluSx SINE Alu 1 293 -19 22 0 0 0 chr10 18811452 18811474 -126777814 + AT_rich Low_complexity Low_complexity 1 22 0 2147 141 0 3 chr10 18811726 18812039 -126777249 - AluSx SINE Alu 0 312 1 214 198 18 63 chr10 18812551 18812662 -126776626 + CT-rich Low_complexity Low_complexity 4 109 0 822 254 10 5 chr10 18813982 18814191 -126775097 + MIR SINE MIR 51 260 -2 836 226 62 25 chr10 18814225 18814250 -126775038 - MER33 DNA MER1_type -2333 252 229 2179 131 0 0 chr10 18814250 18814548 -126774740 - AluSx SINE Alu -14 298 1 836 226 62 25 chr10 18814548 18814765 -126774523 - MER33 DNA MER1_type -2356 229 1 1466 161 9 85 chr10 18815024 18815341 -126773947 - AluJb SINE Alu -19 293 1 669 185 22 99 chr10 18815842 18816023 -126773265 + MER63B DNA MER1_type 2 195 -1493 2204 105 0 10 chr10 18816023 18816328 -126772960 - AluSg SINE Alu -8 302 1 669 185 22 99 chr10 18816328 18816350 -126772938 + MER63B DNA MER1_type 195 1035 -27 266 316 31 0 chr10 18816489 18816587 -126772701 - MIR3 SINE MIR -6 202 102 338 159 14 0 chr10 18817088 18817157 -126772131 + (TA)n Simple_repeat Simple_repeat 1 70 0 2125 138 0 3 chr10 18817157 18817454 -126771834 - AluJb SINE Alu -15 297 2 598 158 271 0 chr10 18817459 18817592 -126771696 + MER58B DNA MER1_type 173 341 0 653 103 0 0 chr10 18818457 18818544 -126770744 + L1PA5 LINE L1 10 96 -6365 * 39454 68 3 3 chr10 18818529 18824386 -126764902 + L1PA5 LINE L1 612 6469 0 27 0 0 0 chr10 18824386 18824413 -126764875 + AT_rich Low_complexity Low_complexity 1 27 0 546 313 50 5 chr10 18825533 18825746 -126763542 - MIR SINE MIR -6 256 36 1983 108 73 3 chr10 18825824 18826112 -126763176 - AluSx SINE Alu -4 308 1 702 221 51 33 chr10 18826216 18826444 -126762844 - MIR SINE MIR 0 262 38 1888 110 11 0 chr10 18826965 18827229 -126762059 - AluSx SINE Alu -4 308 42 203 309 0 0 chr10 18827275 18827330 -126761958 + L2 LINE L2 3206 3260 -12 1093 288 91 32 chr10 18827399 18827861 -126761427 - LTR16C LTR ERVL -2 489 1 2345 103 6 6 chr10 18828112 18828423 -126760865 + AluSx SINE Alu 1 311 -1 253 292 82 55 chr10 18829430 18829649 -126759639 - L2 LINE L2 -1 3312 3088 1953 140 34 0 chr10 18829673 18829966 -126759322 + AluSx SINE Alu 1 303 -9 217 315 43 0 chr10 18829992 18830084 -126759204 - L2 LINE L2 -344 2970 2875 988 218 5 5 chr10 18830187 18830393 -126758895 - MER67C LTR ERV1 0 710 505 404 219 67 9 chr10 18830394 18830499 -126758789 - MER67C LTR ERV1 -374 336 226 348 24 0 0 chr10 18830596 18830637 -126758651 + (TG)n Simple_repeat Simple_repeat 2 42 0 1807 168 10 89 chr10 18830674 18830807 -126758481 - MLT2D LTR ERVL -48 366 224 1937 157 3 6 chr10 18830807 18831119 -126758169 + AluJo SINE Alu 1 311 -1 1807 168 10 89 chr10 18831119 18831377 -126757911 - MLT2D LTR ERVL -190 224 6 197 358 11 0 chr10 18831422 18831517 -126757771 - L2 LINE L2 -823 2491 2396 586 133 0 0 chr10 18832567 18832657 -126756631 + MLT2D LTR ERVL 6 95 -319 21 0 0 0 chr10 18832955 18832976 -126756312 + AT_rich Low_complexity Low_complexity 1 21 0 1832 169 10 7 chr10 18833489 18833784 -126755504 + AluJo SINE Alu 3 298 -14 31 0 0 0 chr10 18835932 18835963 -126753325 + AT_rich Low_complexity Low_complexity 1 31 0 416 299 33 65 chr10 18836032 18836216 -126753072 - MER5A DNA MER1_type -1 188 11 1513 199 29 0 chr10 18836607 18836888 -126752400 + AluJo SINE Alu 4 292 -20 199 194 81 0 chr10 18837247 18837309 -126751979 - MIR SINE MIR -3 259 193 2082 116 3 13 chr10 18837333 18837635 -126751653 - AluSx SINE Alu -1 311 13 215 322 76 25 chr10 18838052 18838170 -126751118 + L3 LINE CR1 1442 1565 -12 357 24 0 0 chr10 18838518 18838560 -126750728 + (A)n Simple_repeat Simple_repeat 1 42 0 2311 77 3 0 chr10 18839221 18839519 -126749769 - AluY SINE Alu -12 299 1 2121 121 0 0 chr10 18841264 18841574 -126747714 - AluSx SINE Alu 0 312 3 1887 131 0 58 chr10 18842220 18842533 -126746755 - AluJb SINE Alu -17 295 1 481 201 38 72 chr10 18842665 18842874 -126746414 + Charlie4 DNA MER1_type 1754 1955 -6 287 333 0 0 chr10 18842875 18842944 -126746344 - L2 LINE L2 -47 3225 3157 330 67 0 0 chr10 18843033 18843078 -126746210 + (TG)n Simple_repeat Simple_repeat 2 46 0 228 364 30 43 chr10 18843092 18843196 -126746092 - L2 LINE L2 -472 2842 2738 1058 181 5 11 chr10 18843196 18843384 -126745904 - L1MB3 LINE L1 0 6183 5997 228 364 30 43 chr10 18843384 18843510 -126745778 - L2 LINE L2 -576 2738 2615 744 273 74 25 chr10 18843512 18843879 -126745409 - L2 LINE L2 -839 2475 2091 2544 122 8 0 chr10 18844142 18844495 -126744793 - L1PA16 LINE L1 -9 6157 5802 24 32 0 0 chr10 18844664 18844695 -126744593 + AT_rich Low_complexity Low_complexity 1 31 0 2452 68 0 0 chr10 18844695 18844988 -126744300 - AluY SINE Alu -18 293 1 235 268 36 0 chr10 18846369 18846425 -126742863 - L2 LINE L2 -12 3301 3244 296 268 27 9 chr10 18846910 18847022 -126742266 - L1ME3A LINE L1 -3 6167 6054 32 0 0 0 chr10 18847062 18847094 -126742194 + AT_rich Low_complexity Low_complexity 1 32 0 1640 263 64 45 chr10 18847128 18847642 -126741646 - L1ME3A LINE L1 -153 6017 5487 2054 113 0 13 chr10 18847642 18847942 -126741346 - AluSx SINE Alu -15 297 2 1640 263 64 45 chr10 18847942 18848050 -126741238 - L1ME3A LINE L1 -683 5487 5383 728 280 138 58 chr10 18848051 18848335 -126740953 - L1ME3A LINE L1 -817 5329 5069 1831 176 0 0 chr10 18848335 18848650 -126740638 - AluSx SINE Alu 0 315 1 728 280 138 58 chr10 18848650 18849057 -126740231 - L1ME3A LINE L1 -1077 5069 4581 248 186 17 0 chr10 18849069 18849128 -126740160 + CT-rich Low_complexity Low_complexity 3 62 0 1877 135 7 11 chr10 18849132 18849406 -126739882 - AluSx SINE Alu -39 273 1 635 242 26 0 chr10 18849413 18849566 -126739722 - L1ME3A LINE L1 -1980 4166 4010 1711 184 7 3 chr10 18849574 18849879 -126739409 - AluJo SINE Alu -6 306 1 842 170 7 0 chr10 18850958 18851093 -126738195 + AluJo SINE Alu 1 136 -176 647 223 0 23 chr10 18851768 18851898 -126737390 - FLAM_A SINE Alu -6 127 1 2017 103 44 0 chr10 18852049 18852344 -126736944 - AluSx SINE Alu 0 307 1 213 39 0 0 chr10 18853776 18853802 -126735486 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 1399 129 0 0 chr10 18853819 18854012 -126735276 - AluSx SINE Alu -115 197 5 3743 145 14 47 chr10 18854981 18855614 -126733674 - LTR9 LTR ERV1 0 612 1 2234 113 0 25 chr10 18855761 18856081 -126733207 + AluSx SINE Alu 1 312 0 2085 121 13 0 chr10 18856750 18857056 -126732232 - AluSx SINE Alu -2 310 1 301 306 0 25 chr10 18857088 18857209 -126732079 - L1ME LINE L1 -305 5816 5699 373 333 44 39 chr10 18857891 18858071 -126731217 - L1ME LINE L1 -456 5665 5485 309 244 22 68 chr10 18858675 18858811 -126730477 + MER5B DNA MER1_type 29 164 -25 600 229 19 45 chr10 18858830 18858987 -126730301 + MER5B DNA MER1_type 1 153 -25 263 380 28 28 chr10 18859027 18859380 -126729908 - L2 LINE L2 -1879 1435 1083 201 267 143 19 chr10 18859576 18859681 -126729607 + MER5B DNA MER1_type 60 177 -1 820 225 6 0 chr10 18860663 18860832 -126728456 - AluJb SINE Alu -10 302 133 2789 72 3 53 chr10 18861050 18861424 -126727864 + THE1A LTR MaLR 1 355 0 317 271 33 66 chr10 18861930 18862052 -126727236 - L2 LINE L2 -5 3267 3150 36 0 0 0 chr10 18862363 18862399 -126726889 + AT_rich Low_complexity Low_complexity 1 36 0 36 97 0 0 chr10 18862447 18862560 -126726728 + AT_rich Low_complexity Low_complexity 1 113 0 1021 122 0 0 chr10 18862775 18862906 -126726382 + FLAM_C SINE Alu 1 131 -2 883 214 0 79 chr10 18863248 18863463 -126725825 + MER63A DNA MER1_type 2 199 -11 194 256 0 23 chr10 18863758 18863801 -126725487 - MIR SINE MIR -29 233 192 1492 166 9 116 chr10 18863906 18864047 -126725241 + AluJo SINE Alu 2 88 -214 2319 77 3 10 chr10 18864047 18864358 -126724930 + AluY SINE Alu 1 309 -2 1492 166 9 116 chr10 18864358 18864553 -126724735 + AluJo SINE Alu 88 302 0 195 341 47 54 chr10 18864600 18864729 -126724559 + L2 LINE L2 3186 3313 0 638 130 0 0 chr10 18864731 18864823 -126724465 + FRAM SINE Alu 16 107 -69 231 88 0 0 chr10 18864845 18864879 -126724409 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 198 327 0 0 chr10 18865274 18865329 -126723959 + L2 LINE L2 2762 2816 -498 630 223 37 78 chr10 18865356 18865470 -126723818 + MIR SINE MIR 38 139 -123 1613 174 3 43 chr10 18865470 18865769 -126723519 + AluJo SINE Alu 1 287 -25 630 223 37 78 chr10 18865769 18865873 -126723415 + MIR SINE MIR 139 246 -16 207 338 113 15 chr10 18865883 18866087 -126723201 + L2 LINE L2 2837 3060 -212 1827 160 3 3 chr10 18866409 18866691 -126722597 - AluSx SINE Alu -27 285 4 2046 113 13 7 chr10 18867788 18868089 -126721199 - AluSx SINE Alu -9 303 1 27 49 0 0 chr10 18868475 18868516 -126720772 + AT_rich Low_complexity Low_complexity 1 41 0 492 211 82 34 chr10 18868808 18868955 -126720333 + MER117 DNA MER1_type 1 154 -43 2131 106 0 3 chr10 18869186 18869522 -126719766 - AluSq SINE Alu 0 335 1 406 230 105 47 chr10 18870144 18870335 -126718953 - L2 LINE L2 0 3313 3112 394 362 49 21 chr10 18870560 18870748 -126718540 - MER5A DNA MER1_type 0 178 1 327 267 107 15 chr10 18870784 18870915 -126718373 + MIR SINE MIR 2 144 -118 2214 105 6 13 chr10 18871362 18871675 -126717613 + AluSq SINE Alu 3 313 0 252 0 0 0 chr10 18872285 18872313 -126716975 + (TTTTA)n Simple_repeat Simple_repeat 3 30 0 1620 134 111 4 chr10 18872323 18872585 -126716703 - AluJb SINE Alu -22 290 1 359 312 50 22 chr10 18872696 18872860 -126716428 - MIR SINE MIR -62 146 9 803 177 0 0 chr10 18873377 18873501 -126715787 + FLAM_C SINE Alu 2 125 -18 210 71 0 0 chr10 18873740 18873768 -126715520 + (TAA)n Simple_repeat Simple_repeat 3 30 0 256 301 86 11 chr10 18873769 18873862 -126715426 - MIR SINE MIR 0 262 163 22 35 0 0 chr10 18873990 18874019 -126715269 + AT_rich Low_complexity Low_complexity 1 29 0 764 218 0 8 chr10 18874210 18874343 -126714945 + FLAM_A SINE Alu 1 132 -1 2048 99 4 4 chr10 18875626 18875899 -126713389 + AluSx SINE Alu 1 273 -39 21 0 0 0 chr10 18875946 18875967 -126713321 + AT_rich Low_complexity Low_complexity 1 21 0 42588 39 0 3 chr10 18876423 18881523 -126707765 - L1PA3 LINE L1 -1062 5084 2 8092 24 0 0 chr10 18881525 18882563 -126706725 + L1PA3 LINE L1 5104 6141 -14 619 202 22 45 chr10 18883418 18883596 -126705692 - Charlie7 DNA MER1_type -1 2611 2438 288 324 20 0 chr10 18883587 18883689 -126705599 - Charlie7 DNA MER1_type -2507 105 2 * 326 272 48 16 chr10 18883798 18883923 -126705365 - L1MC4 LINE L1 -10 8032 7904 256 284 128 28 chr10 18884063 18884345 -126704943 - L1MC4 LINE L1 -227 7815 7506 259 319 140 41 chr10 18884411 18884703 -126704585 + MARNA DNA Mariner 12 332 -254 22 56 0 0 chr10 18886554 18886590 -126702698 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr10 18889808 18889836 -126699452 + AT_rich Low_complexity Low_complexity 1 28 0 364 219 50 106 chr10 18890588 18890709 -126698579 + Charlie8 DNA MER1_type 34 146 -184 2282 57 7 0 chr10 18890709 18891016 -126698272 + AluY SINE Alu 1 309 0 364 219 50 106 chr10 18891016 18891053 -126698235 + Charlie8 DNA MER1_type 146 184 -146 2248 93 3 0 chr10 18891153 18891442 -126697846 - AluSp SINE Alu -23 290 1 1243 187 137 20 chr10 18891446 18891789 -126697499 - MER31B LTR ERV1 -44 422 40 779 158 141 5 chr10 18891890 18892074 -126697214 + Charlie5 DNA MER1_type 32 240 -2372 339 244 0 12 chr10 18892074 18892156 -126697132 + Charlie5 DNA MER1_type 2544 2624 0 756 235 6 6 chr10 18892200 18892366 -126696922 + MLT1E LTR MaLR 1 166 -427 1232 152 66 0 chr10 18892382 18892579 -126696709 + MLT1E LTR MaLR 377 586 -7 915 154 40 0 chr10 18892632 18892781 -126696507 + L1PA15 LINE L1 5992 6146 -19 2178 117 0 0 chr10 18892792 18893091 -126696197 + AluSx SINE Alu 1 299 -13 890 206 143 5 chr10 18893329 18893552 -126695736 + HERVL40 LTR ERVL 5277 5530 0 1486 249 83 9 chr10 18893553 18893999 -126695289 + LTR40a LTR ERVL 2 480 -39 249 187 80 27 chr10 18894261 18894306 -126694982 + MIR3 SINE MIR 105 157 -51 1953 130 3 54 chr10 18894306 18894656 -126694632 + AluSq SINE Alu 1 313 0 249 187 80 27 chr10 18894656 18894685 -126694603 + MIR3 SINE MIR 157 183 -25 190 339 0 0 chr10 18894720 18894782 -126694506 - L2 LINE L2 -1 3312 3251 * 620 236 191 0 chr10 18894750 18894949 -126694339 - MIR SINE MIR -25 237 1 183 310 95 26 chr10 18894960 18895076 -126694212 - L2 LINE L2 -6 3307 3184 338 221 74 0 chr10 18895779 18895874 -126693414 - LTR33 LTR ERVL -307 214 113 209 236 70 108 chr10 18896711 18896868 -126692420 + MER5A DNA MER1_type 39 189 0 2018 113 20 30 chr10 18897052 18897352 -126691936 - AluSx SINE Alu -15 297 1 196 221 44 59 chr10 18897628 18897696 -126691592 - L2 LINE L2 -3169 145 79 888 152 0 23 chr10 18897914 18898046 -126691242 - FLAM_A SINE Alu -4 129 1 3026 185 16 4 chr10 18898553 18899104 -126690184 + MER68 LTR ERV1 5 562 0 731 225 75 21 chr10 18899318 18899731 -126689557 + LTR54 LTR ERV1 1 495 -15 1407 170 9 0 chr10 18899731 18899960 -126689328 - AluJo SINE Alu -17 295 65 207 0 0 0 chr10 18900025 18900048 -126689240 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1483 161 25 49 chr10 18900052 18900337 -126688951 + AluJo SINE Alu 14 291 -21 2184 112 0 7 chr10 18900344 18900639 -126688649 + AluSq SINE Alu 3 295 -18 696 289 128 22 chr10 18900645 18901048 -126688240 - L2 LINE L2 -90 3223 2761 2158 115 3 0 chr10 18901229 18901517 -126687771 + AluSx SINE Alu 1 289 -23 913 163 62 0 chr10 18901630 18901790 -126687498 - AluSp SINE Alu -9 304 135 1545 166 4 4 chr10 18952189 18952436 -126636852 + AluSx SINE Alu 39 285 -27 207 338 113 15 chr10 18952758 18952962 -126636326 - L2 LINE L2 -212 3060 2837 278 227 93 0 chr10 18952972 18953047 -126636241 - MIR SINE MIR -16 246 165 1221 148 5 63 chr10 18953076 18953299 -126635989 - AluJo SINE Alu -25 287 78 1915 164 3 0 chr10 18953735 18954033 -126635255 + AluJo SINE Alu 1 299 -13 359 260 104 46 chr10 18954164 18954337 -126634951 + MIR SINE MIR 77 259 -3 214 155 52 0 chr10 18954699 18954757 -126634531 + GA-rich Low_complexity Low_complexity 5 65 0 1050 167 142 54 chr10 18955110 18955350 -126633938 + AluJo SINE Alu 39 299 -13 564 261 72 43 chr10 18955692 18955899 -126633389 + MIR SINE MIR 2 214 -48 283 314 83 0 chr10 18956622 18956743 -126632545 - L3 LINE CR1 -342 1235 1105 204 299 115 11 chr10 18956876 18956963 -126632325 - L3 LINE CR1 -972 605 510 532 87 22 0 chr10 18956965 18957057 -126632231 + (TA)n Simple_repeat Simple_repeat 2 95 0 1155 175 55 33 chr10 18957062 18957336 -126631952 - AluJo SINE Alu -22 290 11 2022 100 7 34 chr10 18958046 18958337 -126630951 - AluSg SINE Alu -24 286 4 278 328 25 25 chr10 18959163 18959285 -126630003 - MIR SINE MIR -121 141 20 2098 62 4 0 chr10 18959454 18959713 -126629575 + AluY SINE Alu 35 294 -17 2054 129 0 0 chr10 18961246 18961554 -126627734 - AluSx SINE Alu 0 312 5 1663 154 0 26 chr10 18961680 18961953 -126627335 - AluJb SINE Alu -36 276 11 2079 102 0 41 chr10 18962261 18962603 -126626685 - AluSq SINE Alu 0 330 1 1670 147 51 17 chr10 18963338 18963631 -126625657 + AluJo SINE Alu 1 303 -9 2120 122 3 0 chr10 18963654 18963949 -126625339 - AluSx SINE Alu -16 296 1 333 326 0 23 chr10 18963989 18964121 -126625167 - MIR SINE MIR -132 130 2 392 243 66 59 chr10 18964517 18964669 -126624619 - MIR SINE MIR -40 222 70 1306 168 15 27 chr10 18964669 18964931 -126624357 + AluJo SINE Alu 1 259 -53 1500 147 35 12 chr10 18965059 18965318 -126623970 - AluSx SINE Alu -37 275 11 513 359 24 9 chr10 18965689 18965901 -126623387 + MIR SINE MIR 41 255 -7 208 196 18 18 chr10 18966138 18966194 -126623094 + (TTATG)n Simple_repeat Simple_repeat 4 59 0 492 323 90 0 chr10 18966839 18967028 -126622260 - MIR SINE MIR 0 262 57 1894 39 0 13 chr10 18967038 18967271 -126622017 + AluY SINE Alu 81 310 -1 302 317 35 42 chr10 18967514 18967656 -126621632 - L1M LINE L1 -2412 5396 5256 2941 88 3 0 chr10 18967906 18968269 -126621019 - THE1B LTR MaLR 0 364 1 541 152 33 11 chr10 18968670 18968762 -126620526 + AluSx SINE Alu 2 95 -218 2046 113 13 7 chr10 18969199 18969500 -126619788 + AluSx SINE Alu 1 303 -9 2223 110 0 28 chr10 18970597 18970914 -126618374 + AluSx SINE Alu 4 311 -1 1609 90 42 0 chr10 18971067 18971279 -126618009 + AluSx SINE Alu 70 290 -20 24 32 0 0 chr10 18971709 18971740 -126617548 + AT_rich Low_complexity Low_complexity 1 31 0 326 24 0 0 chr10 18971740 18971781 -126617507 - MADE1 DNA Mariner 0 80 40 1091 120 20 0 chr10 18971781 18971931 -126617357 + AluSg/x SINE Alu 142 294 -16 48 88 0 0 chr10 18971986 18972111 -126617177 + AT_rich Low_complexity Low_complexity 1 125 0 2086 171 34 32 chr10 18972592 18973140 -126616148 - MLT2A2 LTR ERVL 0 554 1 31 0 0 0 chr10 18975392 18975423 -126613865 + AT_rich Low_complexity Low_complexity 1 31 0 416 299 33 65 chr10 18975492 18975676 -126613612 - MER5A DNA MER1_type -1 188 11 199 194 81 0 chr10 18976231 18976293 -126612995 - MIR SINE MIR -3 259 193 2065 114 3 13 chr10 18976317 18976615 -126612673 - AluSx SINE Alu -2 310 16 215 322 76 25 chr10 18977038 18977156 -126612132 + L3 LINE CR1 1442 1565 -12 204 111 0 0 chr10 18977491 18977527 -126611761 + (A)n Simple_repeat Simple_repeat 1 36 0 22 0 0 0 chr10 18978185 18978207 -126611081 + AT_rich Low_complexity Low_complexity 1 22 0 458 129 119 0 chr10 18978328 18978429 -126610859 - AluSp SINE Alu -200 113 1 758 200 131 0 chr10 18978430 18978605 -126610683 - L1PB4 LINE L1 -2 6154 5957 1726 198 0 0 chr10 18978781 18979116 -126610172 + AluJo SINE Alu 3 337 0 544 171 0 0 chr10 18979490 18979578 -126609710 - MLT2D LTR ERVL -321 93 6 228 364 10 0 chr10 18979623 18979722 -126609566 - L2 LINE L2 -823 2491 2392 205 377 58 0 chr10 18980624 18980762 -126608526 + L2 LINE L2 2392 2537 -777 587 133 0 0 chr10 18980768 18980858 -126608430 + MLT2D LTR ERVL 6 95 -319 21 0 0 0 chr10 18981155 18981176 -126608112 + AT_rich Low_complexity Low_complexity 1 21 0 1496 179 12 0 chr10 18981689 18981929 -126607359 + AluJo SINE Alu 3 245 -67 2085 121 13 0 chr10 18982603 18982909 -126606379 - AluSx SINE Alu -2 310 1 301 306 0 25 chr10 18982941 18983062 -126606226 - L1ME LINE L1 -305 5816 5699 373 333 44 39 chr10 18983744 18983924 -126605364 - L1ME LINE L1 -456 5665 5485 213 39 0 0 chr10 18985219 18985245 -126604043 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 1399 129 0 0 chr10 18985262 18985455 -126603833 - AluSx SINE Alu -115 197 5 3091 151 14 54 chr10 18986424 18987000 -126602288 - LTR9 LTR ERV1 0 612 60 1620 134 111 4 chr10 18987212 18987474 -126601814 + AluJb SINE Alu 1 290 -22 252 0 0 0 chr10 18987484 18987512 -126601776 + (TAAAA)n Simple_repeat Simple_repeat 3 30 0 2246 105 3 10 chr10 18988245 18988558 -126600730 - AluSq SINE Alu 0 313 3 362 265 103 7 chr10 18989002 18989138 -126600150 - MIR SINE MIR -112 150 2 416 353 48 27 chr10 18989174 18989362 -126599926 + MER5A DNA MER1_type 1 178 0 406 230 105 47 chr10 18989587 18989778 -126599510 + L2 LINE L2 3112 3313 0 2200 106 0 3 chr10 18990400 18990693 -126598595 + AluSq SINE Alu 1 292 -21 2069 166 30 91 chr10 18991044 18991363 -126597925 - MLT1C LTR MaLR 0 467 187 2058 118 38 3 chr10 18991363 18991652 -126597636 - AluSc SINE Alu -10 299 1 2069 166 30 91 chr10 18991652 18991826 -126597462 - MLT1C LTR MaLR -280 187 4 5129 198 67 77 chr10 18991830 18993212 -126596076 - MLT1C-int LTR MaLR -1 1370 2 2208 181 34 55 chr10 18993220 18993691 -126595597 - MLT1C LTR MaLR -6 461 1 2239 95 3 0 chr10 18993714 18993999 -126595289 + AluSg SINE Alu 1 286 -24 933 219 26 63 chr10 18994163 18994433 -126594855 + Charlie4 DNA MER1_type 35 294 -1667 1874 133 0 63 chr10 18994447 18994764 -126594524 - AluJb SINE Alu -15 297 1 467 203 30 79 chr10 18994896 18995098 -126594190 + Charlie4 DNA MER1_type 1754 1945 -16 517 88 0 12 chr10 18995354 18995434 -126593854 + Alu SINE Alu 233 311 0 22 0 0 0 chr10 18995686 18995708 -126593580 + AT_rich Low_complexity Low_complexity 1 22 0 2231 106 0 0 chr10 18996137 18996430 -126592858 - AluSx SINE Alu -19 293 1 299 317 0 10 chr10 18996630 18996731 -126592557 + L1MB4 LINE L1 14 113 -6271 1979 170 14 24 chr10 18996732 18996903 -126592385 - MER47A DNA MER2_type -1957 366 195 3313 171 54 84 chr10 18996903 18997712 -126591576 + LTR1 LTR ERV1 1 785 0 1979 170 14 24 chr10 18997712 18997910 -126591378 - MER47A DNA MER2_type -2128 195 1 355 267 156 44 chr10 18997910 18998135 -126591153 + L1MB4 LINE L1 113 362 -6022 4604 184 45 30 chr10 18998142 19000297 -126588991 + L1MB4 LINE L1 4332 6406 -10 2123 83 31 24 chr10 19001110 19001400 -126587888 - AluY SINE Alu -18 293 2 23 33 0 0 chr10 19001699 19001729 -126587559 + AT_rich Low_complexity Low_complexity 1 30 0 203 295 133 9 chr10 19002345 19002450 -126586838 + MER5B DNA MER1_type 60 177 -1 841 222 6 0 chr10 19003429 19003600 -126585688 - AluJb SINE Alu -8 304 133 2776 75 3 53 chr10 19003818 19004192 -126585096 + THE1A LTR MaLR 1 355 0 317 271 33 66 chr10 19004699 19004821 -126584467 - L2 LINE L2 -5 3267 3150 36 0 0 0 chr10 19005132 19005168 -126584120 + AT_rich Low_complexity Low_complexity 1 36 0 36 97 0 0 chr10 19005217 19005330 -126583958 + AT_rich Low_complexity Low_complexity 1 113 0 1021 122 0 0 chr10 19005545 19005676 -126583612 + FLAM_C SINE Alu 1 131 -2 883 214 0 79 chr10 19006018 19006233 -126583055 + MER63A DNA MER1_type 2 199 -11 194 256 0 23 chr10 19006528 19006571 -126582717 - MIR SINE MIR -29 233 192 1492 166 9 116 chr10 19006676 19006817 -126582471 + AluJo SINE Alu 2 88 -214 2302 80 3 13 chr10 19006817 19007129 -126582159 + AluY SINE Alu 1 309 -2 1492 166 9 116 chr10 19007129 19007324 -126581964 + AluJo SINE Alu 88 302 0 195 341 47 54 chr10 19007371 19007500 -126581788 + L2 LINE L2 3186 3313 0 638 130 0 0 chr10 19007502 19007594 -126581694 + FRAM SINE Alu 16 107 -69 231 88 0 0 chr10 19007616 19007650 -126581638 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 198 327 0 0 chr10 19008045 19008100 -126581188 + L2 LINE L2 2762 2816 -498 482 239 1 11 chr10 19008127 19008243 -126581045 + MIR SINE MIR 38 151 -62 281 174 0 82 chr10 19008243 19008341 -126580947 + AluJ/FLAM SINE Alu 1 90 -212 226 259 28 25 chr10 19008397 19008721 -126580567 + CT-rich Low_complexity Low_complexity 1 325 0 282 249 23 39 chr10 19008733 19008958 -126580330 + CT-rich Low_complexity Low_complexity 1 221 0 24 0 0 0 chr10 19009166 19009190 -126580098 + AT_rich Low_complexity Low_complexity 1 24 0 243 61 0 0 chr10 19009511 19009544 -126579744 + (CA)n Simple_repeat Simple_repeat 2 34 0 1892 122 37 4 chr10 19009734 19010005 -126579283 + AluSx SINE Alu 1 280 -32 206 32 32 0 chr10 19010005 19010036 -126579252 + (CAAA)n Simple_repeat Simple_repeat 4 35 0 509 261 133 18 chr10 19010241 19010467 -126578821 + MIR SINE MIR 10 261 -1 905 218 17 0 chr10 19010592 19010771 -126578517 + L1PA12 LINE L1 5983 6164 -4 2074 148 18 24 chr10 19011751 19012088 -126577200 + MER1B DNA MER1_type 3 337 0 1832 93 4 12 chr10 19012275 19012532 -126576756 - AluSq SINE Alu -14 299 45 218 368 33 41 chr10 19013087 19013202 -126576086 - L2 LINE L2 -460 2854 2740 1058 181 5 11 chr10 19013202 19013390 -126575898 - L1MB3 LINE L1 0 6183 5997 218 368 33 41 chr10 19013390 19013516 -126575772 - L2 LINE L2 -574 2740 2615 759 270 74 25 chr10 19013518 19013885 -126575403 - L2 LINE L2 -839 2475 2091 2501 128 8 0 chr10 19014148 19014501 -126574787 - L1PA16 LINE L1 -9 6157 5802 24 32 0 0 chr10 19014670 19014701 -126574587 + AT_rich Low_complexity Low_complexity 1 31 0 2391 75 0 3 chr10 19014701 19014995 -126574293 - AluY SINE Alu -18 293 1 235 268 36 0 chr10 19016378 19016434 -126572854 - L2 LINE L2 -12 3301 3244 296 268 27 9 chr10 19016919 19017031 -126572257 - L1ME3A LINE L1 -3 6167 6054 32 0 0 0 chr10 19017071 19017103 -126572185 + AT_rich Low_complexity Low_complexity 1 32 0 1643 263 64 45 chr10 19017137 19017651 -126571637 - L1ME3A LINE L1 -153 6017 5487 1993 116 0 17 chr10 19017651 19017952 -126571336 - AluSx SINE Alu -15 297 2 1643 263 64 45 chr10 19017952 19018060 -126571228 - L1ME3A LINE L1 -683 5487 5383 716 281 139 55 chr10 19018061 19018341 -126570947 - L1ME3A LINE L1 -817 5329 5074 1809 180 0 0 chr10 19018341 19018664 -126570624 - AluSx SINE Alu 0 323 1 716 281 139 55 chr10 19018664 19019073 -126570215 - L1ME3A LINE L1 -1072 5074 4581 263 161 18 0 chr10 19019094 19019150 -126570138 + CT-rich Low_complexity Low_complexity 1 57 0 1877 135 7 11 chr10 19019150 19019424 -126569864 - AluSx SINE Alu -39 273 1 635 242 26 0 chr10 19019431 19019584 -126569704 - L1ME3A LINE L1 -1980 4166 4010 1711 184 7 3 chr10 19019592 19019897 -126569391 - AluJo SINE Alu -6 306 1 842 170 7 0 chr10 19020976 19021111 -126568177 + AluJo SINE Alu 1 136 -176 1655 153 0 0 chr10 19021856 19022097 -126567191 - AluSx SINE Alu -71 241 1 214 198 18 63 chr10 19022609 19022720 -126566568 + CT-rich Low_complexity Low_complexity 4 109 0 191 86 57 0 chr10 19023562 19023597 -126565691 - L3 LINE CR1 -173 1404 1368 180 286 20 61 chr10 19023574 19023672 -126565616 - L3b LINE CR1 -193 1390 1297 * 923 252 5 5 chr10 19024040 19024250 -126565038 + MIR SINE MIR 51 260 -2 858 226 62 25 chr10 19024284 19024309 -126564979 - MER33 DNA MER1_type -2333 252 229 2160 131 0 0 chr10 19024309 19024607 -126564681 - AluSx SINE Alu -14 298 1 858 226 62 25 chr10 19024607 19024824 -126564464 - MER33 DNA MER1_type -2356 229 1 1403 164 13 88 chr10 19025083 19025400 -126563888 - AluJb SINE Alu -19 293 1 656 190 22 99 chr10 19025901 19026082 -126563206 + MER63B DNA MER1_type 2 195 -1493 2313 97 0 3 chr10 19026082 19026382 -126562906 - AluSg SINE Alu -11 299 1 656 190 22 99 chr10 19026382 19026404 -126562884 + MER63B DNA MER1_type 195 1035 -27 304 312 50 21 chr10 19026544 19026685 -126562603 - MIR3 SINE MIR -6 202 58 304 169 0 17 chr10 19027152 19027211 -126562077 - L1MC4 LINE L1 -1337 6705 6648 2072 145 0 3 chr10 19027212 19027508 -126561780 - AluJb SINE Alu -17 295 1 577 318 50 5 chr10 19027896 19028109 -126561179 - MIR SINE MIR -6 256 36 1951 103 72 7 chr10 19028187 19028477 -126560811 - AluSx SINE Alu -3 309 1 760 221 53 33 chr10 19028581 19028809 -126560479 - MIR SINE MIR 0 262 38 1819 118 11 0 chr10 19029330 19029593 -126559695 - AluSx SINE Alu -5 307 42 220 309 0 0 chr10 19029639 19029694 -126559594 + L2 LINE L2 3206 3260 -12 1127 288 91 32 chr10 19029763 19030225 -126559063 - LTR16C LTR ERVL -2 489 1 2317 103 7 7 chr10 19030476 19030786 -126558502 + AluSx SINE Alu 1 310 -2 201 363 71 0 chr10 19030979 19031092 -126558196 + L2 LINE L2 3193 3313 0 376 302 223 30 chr10 19031793 19032036 -126557252 - L2 LINE L2 -1 3312 3117 1907 132 35 3 chr10 19032036 19032324 -126556964 + AluSx SINE Alu 1 297 -15 376 302 223 30 chr10 19032324 19032448 -126556840 - L2 LINE L2 -196 3117 2874 1008 214 5 5 chr10 19032551 19032757 -126556531 - MER67C LTR ERV1 0 710 505 405 219 67 9 chr10 19032758 19032863 -126556425 - MER67C LTR ERV1 -374 336 226 240 35 0 0 chr10 19032960 19032989 -126556299 + (TG)n Simple_repeat Simple_repeat 2 30 0 1261 193 11 108 chr10 19033026 19033159 -126556129 - MLT2D LTR ERVL -48 366 222 1994 153 0 6 chr10 19033159 19033472 -126555816 + AluJo SINE Alu 1 311 -1 1261 193 11 108 chr10 19033472 19033700 -126555588 - MLT2D LTR ERVL -192 222 40 803 177 0 0 chr10 19034503 19034627 -126554661 + FLAM_C SINE Alu 2 125 -18 210 71 0 0 chr10 19034867 19034895 -126554393 + (TAA)n Simple_repeat Simple_repeat 3 30 0 256 301 86 11 chr10 19034896 19034989 -126554299 - MIR SINE MIR 0 262 163 22 35 0 0 chr10 19035117 19035146 -126554142 + AT_rich Low_complexity Low_complexity 1 29 0 764 218 0 8 chr10 19035314 19035447 -126553841 + FLAM_A SINE Alu 1 132 -1 2153 107 0 23 chr10 19035564 19035872 -126553416 + AluSx SINE Alu 1 301 -11 200 314 14 0 chr10 19036255 19036325 -126552963 + MIR SINE MIR 96 166 -96 265 279 0 0 chr10 19037545 19037613 -126551675 + MER117 DNA MER1_type 107 174 -23 1900 167 0 3 chr10 19037739 19038050 -126551238 - AluSx SINE Alu -1 311 2 2227 109 3 0 chr10 19039174 19039468 -126549820 + AluSg1 SINE Alu 1 295 -14 203 238 95 76 chr10 19039604 19039709 -126549579 - MIR SINE MIR -90 172 66 2218 105 3 7 chr10 19040004 19040308 -126548980 - AluSx SINE Alu -9 303 1 1978 143 8 37 chr10 19040347 19040724 -126548564 - L1PA16 LINE L1 0 6166 5801 202 268 187 24 chr10 19041451 19041574 -126547714 - MIR SINE MIR -78 184 42 2108 132 7 0 chr10 19041701 19041996 -126547292 - AluSx SINE Alu -15 297 1 512 288 99 44 chr10 19042419 19042784 -126546504 - L1MC4a LINE L1 -1841 5967 5583 182 279 49 0 chr10 19043058 19043119 -126546169 + MIR SINE MIR 84 147 -115 204 125 0 0 chr10 19043696 19043728 -126545560 + (T)n Simple_repeat Simple_repeat 1 32 0 204 250 39 0 chr10 19044164 19044216 -126545072 - L2 LINE L2 -29 3243 3190 189 206 122 10 chr10 19044497 19044580 -126544708 - MIR SINE MIR -99 109 14 979 189 0 17 chr10 19044943 19045123 -126544165 + AluJb SINE Alu 135 311 -1 25 83 0 0 chr10 19045287 19045347 -126543941 + AT_rich Low_complexity Low_complexity 1 60 0 803 138 0 15 chr10 19046114 19046244 -126543044 + FLAM_C SINE Alu 1 128 -5 221 167 48 0 chr10 19046465 19046507 -126542781 + L3b LINE CR1 1290 1333 -250 33 56 0 0 chr10 19047076 19047130 -126542158 + AT_rich Low_complexity Low_complexity 1 54 0 294 29 0 0 chr10 19049366 19049401 -126539887 + (TG)n Simple_repeat Simple_repeat 2 36 0 261 291 53 53 chr10 19049671 19049741 -126539547 + MIR SINE MIR 111 180 -82 1724 166 59 3 chr10 19049741 19050049 -126539239 - AluJb SINE Alu 0 312 1 261 291 53 53 chr10 19050049 19050129 -126539159 + MIR SINE MIR 179 261 -1 210 246 0 18 chr10 19050130 19050187 -126539101 + (TTG)n Simple_repeat Simple_repeat 3 58 0 2140 109 0 7 chr10 19050481 19050788 -126538500 - AluSq SINE Alu 0 305 1 230 305 69 38 chr10 19050824 19050955 -126538333 - L2 LINE L2 -1692 1622 1488 2592 52 0 3 chr10 19051087 19051396 -126537892 + AluY SINE Alu 1 308 -3 2312 96 0 3 chr10 19051685 19051988 -126537300 + AluSx SINE Alu 1 302 -10 274 358 128 0 chr10 19052958 19053106 -126536182 - MIR3 SINE MIR -7 201 35 253 238 0 0 chr10 19053380 19053443 -126535845 - MIR SINE MIR -108 154 92 501 293 30 79 chr10 19053486 19053752 -126535536 + L1MEd LINE L1 369 621 -5498 268 275 24 65 chr10 19053936 19054183 -126535105 - L1MEc LINE L1 -4735 1575 1339 2155 141 0 0 chr10 19054292 19054583 -126534705 - AluSg SINE Alu -18 292 2 439 292 24 76 chr10 19054638 19054926 -126534362 - L1MEc LINE L1 -4928 1191 919 1822 171 0 0 chr10 19055129 19055416 -126533872 - AluSx SINE Alu -25 287 1 395 294 74 74 chr10 19055583 19056067 -126533221 - L1MEc LINE L1 -5561 558 72 1825 162 3 23 chr10 19056067 19056376 -126532912 - AluJb SINE Alu -9 303 1 395 294 74 74 chr10 19056376 19056402 -126532886 - L1MEc LINE L1 -6046 73 48 30 21 0 21 chr10 19056805 19056826 -126532462 + AT_rich Low_complexity Low_complexity 1 21 -26 2137 111 0 10 chr10 19056826 19057115 -126532173 + AluSq SINE Alu 1 286 -27 30 21 0 21 chr10 19057115 19057141 -126532147 + AT_rich Low_complexity Low_complexity 21 47 0 217 233 0 0 chr10 19059608 19059651 -126529637 + CT-rich Low_complexity Low_complexity 2 44 0 2095 135 0 0 chr10 19059799 19060095 -126529193 - AluSx SINE Alu -10 302 7 207 286 50 79 chr10 19060242 19060345 -126528943 - MIR SINE MIR -29 233 134 2264 119 7 0 chr10 19060345 19060647 -126528641 + AluSp SINE Alu 1 304 -9 207 286 50 79 chr10 19060647 19060683 -126528605 - MIR SINE MIR -128 134 98 240 289 72 0 chr10 19061853 19061936 -126527352 - MIR SINE MIR -87 175 87 255 170 0 0 chr10 19062065 19062112 -126527176 + GA-rich Low_complexity Low_complexity 1 47 0 182 253 172 92 chr10 19062648 19062735 -126526553 - MER5B DNA MER1_type -50 128 35 512 211 11 22 chr10 19062861 19063041 -126526247 + CT-rich Low_complexity Low_complexity 1 178 0 846 126 6 33 chr10 19063056 19063238 -126526050 + (TTC)n Simple_repeat Simple_repeat 2 178 0 1411 207 25 22 chr10 19063247 19063522 -126525766 - AluJo SINE Alu -36 276 1 216 191 0 0 chr10 19063844 19063891 -126525397 + (CAAA)n Simple_repeat Simple_repeat 2 48 0 1626 136 56 70 chr10 19063994 19064368 -126524920 - THE1C LTR MaLR 0 375 7 186 360 0 0 chr10 19069248 19069298 -126519990 - MIR SINE MIR -193 69 20 1977 205 42 36 chr10 19069883 19070381 -126518907 - MLT1D LTR MaLR 0 505 5 190 300 80 20 chr10 19070456 19070556 -126518732 - L3 LINE CR1 -146 1431 1326 5159 100 4 4 chr10 19071070 19071839 -126517449 - L1PB1 LINE L1 -1 6150 5382 2269 123 0 0 chr10 19072047 19072348 -126516940 - AluSx SINE Alu -11 301 1 21 0 0 0 chr10 19072497 19072518 -126516770 + AT_rich Low_complexity Low_complexity 1 21 0 187 120 20 20 chr10 19072867 19072917 -126516371 + (TA)n Simple_repeat Simple_repeat 1 50 0 379 160 77 13 chr10 19073024 19073180 -126516108 + (TA)n Simple_repeat Simple_repeat 2 167 0 367 140 0 35 chr10 19073180 19073261 -126516027 - FLAM_A SINE Alu -70 62 10 21 36 0 0 chr10 19073319 19073347 -126515941 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr10 19074077 19074099 -126515189 + AT_rich Low_complexity Low_complexity 1 22 0 1007 169 6 0 chr10 19074464 19074624 -126514664 - FRAM SINE Alu -12 164 4 253 247 0 67 chr10 19074685 19074774 -126514514 + MIR3 SINE MIR 125 207 -1 1957 123 3 30 chr10 19075161 19075463 -126513825 - AluSq SINE Alu -19 294 1 284 297 101 27 chr10 19075909 19076057 -126513231 + MIR SINE MIR 103 261 -1 24 53 0 0 chr10 19076244 19076282 -126513006 + AT_rich Low_complexity Low_complexity 1 38 0 316 253 117 93 chr10 19077146 19077308 -126511980 - MIR SINE MIR -60 202 37 1311 150 137 82 chr10 19077471 19077764 -126511524 - AluJo SINE Alu -3 309 1 297 326 257 17 chr10 19077924 19078332 -126510956 + L3 LINE CR1 1070 1575 -2 1812 180 0 3 chr10 19078934 19079218 -126510070 - AluJo SINE Alu -19 293 11 1611 190 0 7 chr10 19079783 19080067 -126509221 - AluJo SINE Alu -30 282 1 2160 130 38 19 chr10 19080224 19080592 -126508696 - THE1C LTR MaLR 0 375 1 268 318 109 18 chr10 19080702 19080812 -126508476 - MER91A DNA MER1_type 0 196 77 191 111 0 22 chr10 19081611 19081656 -126507632 + (CAT)n Simple_repeat Simple_repeat 2 45 0 182 289 0 0 chr10 19081657 19081702 -126507586 - MIR SINE MIR -6 256 212 525 104 0 0 chr10 19082078 19082155 -126507133 + (TTCC)n Simple_repeat Simple_repeat 4 80 0 201 226 0 0 chr10 19082147 19082200 -126507088 + C-rich Low_complexity Low_complexity 6 58 0 * 1992 111 4 0 chr10 19082233 19082495 -126506793 - AluSq SINE Alu -46 267 5 414 195 0 0 chr10 19082872 19082954 -126506334 + MER41B LTR ERV1 468 549 -86 1647 65 0 9 chr10 19082971 19083225 -126506063 + AluY SINE Alu 67 318 0 2143 118 3 10 chr10 19083596 19083900 -126505388 - AluSg SINE Alu -7 303 2 2141 248 20 11 chr10 19084347 19084981 -126504307 - L1MCa LINE L1 -3276 3150 2511 5019 217 92 75 chr10 19084987 19085225 -126504063 - L1MCa LINE L1 -3951 2475 2243 800 159 0 36 chr10 19085225 19085363 -126503925 - FLAM_C SINE Alu 0 133 1 5019 217 92 75 chr10 19085363 19086556 -126502732 - L1MCa LINE L1 -4183 2243 984 3580 128 2 24 chr10 19086556 19086929 -126502359 + MER1A DNA MER1_type 1 361 -2339 2288 64 0 0 chr10 19086929 19087261 -126502027 - AluY SINE Alu 0 334 3 3580 128 2 24 chr10 19087261 19087425 -126501863 + MER1A DNA MER1_type 361 527 0 5019 217 92 75 chr10 19087425 19088425 -126500863 - L1MCa LINE L1 -5442 984 2 2356 87 0 3 chr10 19088527 19088826 -126500462 + AluSc SINE Alu 1 298 -11 273 119 0 0 chr10 19088935 19088977 -126500311 + (TTCC)n Simple_repeat Simple_repeat 1 42 0 1846 158 0 4 chr10 19088977 19089256 -126500032 - AluJo SINE Alu -34 278 1 759 127 67 40 chr10 19090168 19090190 -126499098 - L1PA8 LINE L1 0 6172 6152 2354 110 3 0 chr10 19090190 19090500 -126498788 - AluSx SINE Alu -1 311 1 204 40 0 0 chr10 19090504 19090529 -126498759 + (TTTTA)n Simple_repeat Simple_repeat 1 25 0 759 127 67 40 chr10 19090529 19090651 -126498637 - L1PA8 LINE L1 -22 6150 6019 1486 167 3 123 chr10 19090692 19091057 -126498231 + AluJb SINE Alu 1 324 0 1606 124 295 3 chr10 19091523 19091869 -126497419 - MER66A LTR ERV1 -5 473 27 722 184 0 0 chr10 19092452 19092566 -126496722 + FLAM_C SINE Alu 3 116 -27 276 100 0 0 chr10 19092566 19092606 -126496682 + (TAAAA)n Simple_repeat Simple_repeat 1 40 0 1294 210 59 16 chr10 19092731 19093036 -126496252 - MER58B DNA MER1_type -22 319 2 194 279 15 59 chr10 19094142 19094210 -126495078 - L2 LINE L2 -20 3293 3229 2246 91 10 3 chr10 19095619 19095928 -126493360 + AluSq SINE Alu 1 311 -2 29 60 0 0 chr10 19096193 19096243 -126493045 + AT_rich Low_complexity Low_complexity 1 50 0 2293 95 0 0 chr10 19097210 19097506 -126491782 + AluSq SINE Alu 1 296 -17 21 36 0 0 chr10 19098023 19098051 -126491237 + AT_rich Low_complexity Low_complexity 1 28 0 516 61 0 0 chr10 19098606 19098672 -126490616 + U4 snRNA snRNA 1 66 -79 1518 217 18 39 chr10 19098676 19099188 -126490100 - L1M4c LINE L1 -3643 3001 2556 2195 141 0 0 chr10 19099188 19099500 -126489788 - AluSx SINE Alu 0 312 1 1518 217 18 39 chr10 19099500 19099577 -126489711 - L1M4c LINE L1 -4088 2556 2479 1262 127 0 0 chr10 19099607 19099773 -126489515 + AluSg/x SINE Alu 130 295 -17 825 281 103 20 chr10 19099817 19100386 -126488902 - L1M4c LINE L1 -4406 2419 1675 3183 246 15 36 chr10 19100401 19101264 -126488024 - L1M4c LINE L1 -5697 845 1 685 277 66 16 chr10 19101544 19101786 -126487502 + MIR SINE MIR 9 262 0 1528 108 0 19 chr10 19104077 19104291 -126484997 - AluSc SINE Alu -8 301 92 2225 113 3 0 chr10 19104363 19104674 -126484614 - AluSx SINE Alu 0 312 1 206 136 23 0 chr10 19104892 19104936 -126484352 + (TAGA)n Simple_repeat Simple_repeat 2 46 0 24 0 0 0 chr10 19105080 19105104 -126484184 + AT_rich Low_complexity Low_complexity 1 24 0 239 218 23 35 chr10 19105644 19105731 -126483557 + T-rich Low_complexity Low_complexity 1 86 0 2261 113 33 33 chr10 19107335 19107699 -126481589 - THE1B LTR MaLR 0 364 1 2413 97 0 0 chr10 19108005 19108316 -126480972 + AluSq SINE Alu 1 311 -2 207 0 0 0 chr10 19108519 19108542 -126480746 + (CTAG)n Simple_repeat Simple_repeat 2 24 0 273 274 87 58 chr10 19109150 19109358 -126479930 - L2 LINE L2 0 3313 3100 698 214 127 0 chr10 19109376 19109441 -126479847 - MER69 DNA AcHobo 0 2526 2471 1798 157 3 29 chr10 19109441 19109754 -126479534 + AluJo SINE Alu 1 305 -7 698 214 127 0 chr10 19109754 19109899 -126479389 - MER69 DNA AcHobo -55 2471 2288 451 127 0 0 chr10 19109899 19109970 -126479318 - MLT1B LTR MaLR -2 388 318 404 272 11 43 chr10 19110003 19110187 -126479101 + (TATG)n Simple_repeat Simple_repeat 3 180 0 322 273 16 49 chr10 19110213 19110396 -126478892 + (TATATG)n Simple_repeat Simple_repeat 2 178 0 268 208 13 52 chr10 19110431 19110585 -126478703 + (TATG)n Simple_repeat Simple_repeat 2 149 0 299 257 28 28 chr10 19110587 19110696 -126478592 + (TATATG)n Simple_repeat Simple_repeat 4 112 0 226 194 14 69 chr10 19110710 19110854 -126478434 + (TATG)n Simple_repeat Simple_repeat 2 137 0 1480 198 92 9 chr10 19110863 19111201 -126478087 - MLT2D LTR ERVL -48 366 1 1297 220 83 94 chr10 19111201 19111996 -126477292 - MER69 DNA AcHobo -283 2243 1458 479 299 11 75 chr10 19112130 19112173 -126477115 - MER69 DNA AcHobo -593 633 589 1731 89 8 8 chr10 19112173 19112409 -126476879 - AluSq SINE Alu -2 311 76 479 299 11 75 chr10 19112409 19112646 -126476642 - MER69 DNA AcHobo -637 589 371 437 253 67 41 chr10 19112662 19112715 -126476573 + MLT2C1 LTR ERVL 17 213 -182 597 194 7 29 chr10 19112715 19112854 -126476434 + MLT1E3 LTR MaLR 87 222 -402 204 40 0 0 chr10 19112933 19112958 -126476330 + (TCCCC)n Simple_repeat Simple_repeat 1 25 0 184 137 39 20 chr10 19112958 19113009 -126476279 + CT-rich Low_complexity Low_complexity 3 54 0 1725 203 0 3 chr10 19113015 19113325 -126475963 - AluJo SINE Alu -3 309 1 225 0 0 0 chr10 19113547 19113572 -126475716 + (TA)n Simple_repeat Simple_repeat 1 25 0 2342 84 0 3 chr10 19113572 19113868 -126475420 - AluSq SINE Alu -18 295 1 1139 165 57 70 chr10 19113888 19114204 -126475084 - MER69 DNA AcHobo -2206 320 9 2147 105 96 0 chr10 19114626 19114958 -126474330 + THE1B LTR MaLR 1 364 0 2938 172 25 73 chr10 19115324 19116050 -126473238 + LTR8 LTR ERV1 1 691 0 239 128 149 0 chr10 19116050 19116097 -126473191 + MER5B DNA MER1_type 79 132 -46 690 210 118 105 chr10 19116162 19116552 -126472736 + MSTD LTR MaLR 2 396 0 334 225 0 25 chr10 19116842 19116922 -126472366 + MSTC LTR MaLR 19 96 -332 21 0 0 0 chr10 19117034 19117055 -126472233 + AT_rich Low_complexity Low_complexity 1 21 0 500 290 16 32 chr10 19117609 19117795 -126471493 - MER5A DNA MER1_type 0 189 7 2761 143 33 22 chr10 19118276 19118767 -126470521 + MER41E LTR ERV1 17 512 0 225 0 0 0 chr10 19119371 19119396 -126469892 + (A)n Simple_repeat Simple_repeat 1 25 0 1135 296 183 22 chr10 19121731 19122664 -126466624 + L2 LINE L2 2207 3303 -10 325 264 72 83 chr10 19122745 19122938 -126466350 - L2 LINE L2 -1257 2057 1867 273 283 66 19 chr10 19123155 19123261 -126466027 + MER5B DNA MER1_type 68 178 0 3383 170 29 31 chr10 19123475 19123816 -126465472 - L1MB3 LINE L1 -6 6177 5837 2039 101 74 20 chr10 19123816 19124113 -126465175 - AluSp SINE Alu 0 313 1 3383 170 29 31 chr10 19124113 19124540 -126464748 - L1MB3 LINE L1 -346 5837 5411 2464 86 0 0 chr10 19124697 19124998 -126464290 + AluSc SINE Alu 1 301 -8 2706 149 65 19 chr10 19125118 19125165 -126464123 + LTR49 LTR ERV1 1 44 -551 569 100 0 0 chr10 19125165 19125245 -126464043 - MADE1 DNA Mariner 0 80 1 2706 149 65 19 chr10 19125245 19125715 -126463573 + LTR49 LTR ERV1 44 549 -46 207 0 0 0 chr10 19125715 19125738 -126463550 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2706 149 65 19 chr10 19125738 19125788 -126463500 + LTR49 LTR ERV1 549 595 0 383 302 129 5 chr10 19126004 19126206 -126463082 - MIR SINE MIR -30 232 6 1939 101 22 53 chr10 19126395 19126713 -126462575 - AluSg SINE Alu -2 308 1 1991 146 10 3 chr10 19126766 19127068 -126462220 - AluSx SINE Alu -8 304 1 1961 184 35 79 chr10 19127349 19127831 -126461457 + MLT2B1 LTR ERVL 1 458 -62 2033 148 0 0 chr10 19127831 19128134 -126461154 + AluSx SINE Alu 1 303 -9 1961 184 35 79 chr10 19128134 19128195 -126461093 + MLT2B1 LTR ERVL 458 520 0 279 269 157 19 chr10 19128855 19128963 -126460325 + L2 LINE L2 3100 3222 -50 601 233 89 35 chr10 19129035 19129079 -126460209 - MIR SINE MIR -19 243 203 2068 128 7 0 chr10 19129079 19129376 -126459912 - AluSx SINE Alu -13 299 1 601 233 89 35 chr10 19129376 19129533 -126459755 - MIR SINE MIR -59 203 31 333 274 26 13 chr10 19129997 19130150 -126459138 + (TA)n Simple_repeat Simple_repeat 2 156 0 1664 189 4 4 chr10 19130251 19130532 -126458756 - AluJo SINE Alu -31 281 1 2659 26 0 3 chr10 19130802 19131106 -126458182 + AluY SINE Alu 1 303 -8 357 208 239 31 chr10 19131109 19131268 -126458020 - HAL1 LINE L1 -296 2211 2020 997 231 224 12 chr10 19131398 19131884 -126457404 - HAL1 LINE L1 -928 1579 991 285 322 55 27 chr10 19132011 19132157 -126457131 - HAL1 LINE L1 -2011 496 347 281 237 237 35 chr10 19132158 19132272 -126457016 - MER63A DNA MER1_type -1 209 73 438 265 129 56 chr10 19132358 19132645 -126456643 - HAL1 LINE L1 -2152 355 48 381 266 171 19 chr10 19132831 19133014 -126456274 - MIR SINE MIR -16 246 40 1708 106 101 53 chr10 19133362 19133720 -126455568 - THE1C LTR MaLR 0 375 1 1252 191 15 53 chr10 19133811 19134267 -126455021 + MLT2B1 LTR ERVL 1 520 0 258 278 69 0 chr10 19134303 19134375 -126454913 - MER91C DNA MER1_type -30 110 34 437 314 19 19 chr10 19134826 19134985 -126454303 - L2 LINE L2 0 3313 3155 236 321 212 52 chr10 19136665 19137033 -126452255 - L2 LINE L2 -18 3254 2828 192 222 0 0 chr10 19137152 19137188 -126452100 - MIR SINE MIR -61 147 112 234 0 0 0 chr10 19137251 19137277 -126452011 + (A)n Simple_repeat Simple_repeat 1 26 0 1726 191 91 0 chr10 19137726 19138087 -126451201 + MSTD LTR MaLR 3 396 0 311 247 187 13 chr10 19138091 19138241 -126451047 - L1ME4a LINE L1 0 6121 5946 613 203 94 22 chr10 19138982 19139120 -126450168 + MLT1E LTR MaLR 22 169 -424 * 1198 206 26 9 chr10 19139117 19139345 -126449943 + MLT1E LTR MaLR 362 593 0 2266 120 0 3 chr10 19139727 19140036 -126449252 + AluSq SINE Alu 1 308 -5 22 0 0 0 chr10 19140239 19140261 -126449027 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr10 19140351 19140379 -126448909 + AT_rich Low_complexity Low_complexity 1 28 0 12094 99 9 3 chr10 19140469 19142182 -126447106 - L1P LINE L1 -1171 4975 3252 7039 108 19 1 chr10 19142180 19143221 -126446067 + L1P LINE L1 2196 3255 -2891 * 22 0 0 0 chr10 19143227 19143249 -126446039 + AT_rich Low_complexity Low_complexity 1 22 0 198 284 123 12 chr10 19143415 19143496 -126445792 + MIR3 SINE MIR 8 97 -111 5108 148 47 16 chr10 19143937 19144810 -126444478 + MER49 LTR ERV1 15 914 -9 1648 112 0 9 chr10 19144936 19145160 -126444128 + AluSp SINE Alu 79 300 -13 2138 110 0 23 chr10 19145455 19145755 -126443533 + AluSx SINE Alu 1 293 -19 5324 84 132 0 chr10 19145805 19146535 -126442753 - LTR12 LTR ERV1 0 826 1 755 185 44 54 chr10 19146710 19146915 -126442373 - pTR5 LTR ERV1 -1493 945 743 2341 106 0 3 chr10 19148287 19148598 -126440690 - AluSg SINE Alu 0 310 1 296 271 163 23 chr10 19149931 19150060 -126439228 - MER5B DNA MER1_type -1 177 31 2190 112 0 7 chr10 19150061 19150365 -126438923 - AluSg SINE Alu -8 302 1 28 0 0 0 chr10 19150734 19150762 -126438526 + AT_rich Low_complexity Low_complexity 1 28 0 200 265 60 12 chr10 19151809 19151892 -126437396 + MIR SINE MIR 117 203 -59 229 254 0 34 chr10 19152482 19152541 -126436747 - MER5B DNA MER1_type -121 57 1 232 246 46 0 chr10 19154438 19154503 -126434785 + MIR SINE MIR 64 131 -131 21 57 0 0 chr10 19154638 19154673 -126434615 + AT_rich Low_complexity Low_complexity 1 35 0 1800 220 17 98 chr10 19155669 19156259 -126433029 - MER34 LTR ERV1 0 542 1 457 287 138 35 chr10 19156314 19156514 -126432774 - L2 LINE L2 -6 3307 3068 1245 193 49 58 chr10 19156514 19156840 -126432448 + MER33 DNA MER1_type 2 324 0 457 287 138 35 chr10 19156840 19156921 -126432367 - L2 LINE L2 -245 3068 2997 1796 178 0 31 chr10 19158684 19159004 -126430284 + AluJo SINE Alu 1 310 -2 186 353 92 29 chr10 19159940 19160113 -126429175 + L2 LINE L2 458 641 -2673 265 139 70 0 chr10 19160311 19160354 -126428934 + L2 LINE L2 3213 3258 -14 2376 96 0 0 chr10 19160735 19161036 -126428252 + AluSq SINE Alu 1 301 -12 1664 197 3 3 chr10 19162115 19162419 -126426869 - AluJo SINE Alu -6 306 3 1176 213 145 61 chr10 19162445 19162498 -126426790 - L1MC5 LINE L1 -284 7677 7630 2241 97 0 13 chr10 19162498 19162796 -126426492 + AluSx SINE Alu 1 294 -18 1176 213 145 61 chr10 19162796 19163334 -126425954 - L1MC5 LINE L1 -331 7630 7036 2400 57 0 13 chr10 19163412 19163711 -126425577 + AluY SINE Alu 1 295 -16 31 0 0 0 chr10 19163711 19163742 -126425546 + AT_rich Low_complexity Low_complexity 1 31 0 371 323 45 18 chr10 19163940 19164160 -126425128 - L1M4 LINE L1 -1886 4260 4035 644 224 31 85 chr10 19164195 19164454 -126424834 - L1M4 LINE L1 -4576 2249 2005 19964 153 39 20 chr10 19164465 19166483 -126422805 - L1MA2 LINE L1 -4 7719 5741 369 0 0 0 chr10 19166483 19166524 -126422764 + (TG)n Simple_repeat Simple_repeat 2 42 0 19964 153 39 20 chr10 19166524 19172062 -126417226 - L1MA2 LINE L1 -1982 5741 16 1612 240 42 71 chr10 19172064 19172225 -126417063 - L1M4 LINE L1 -4779 1867 1703 1958 127 0 27 chr10 19172225 19172524 -126416764 - AluSx SINE Alu -15 297 7 1612 240 42 71 chr10 19172524 19173136 -126416152 - L1M4 LINE L1 -4943 1703 1107 198 355 37 37 chr10 19174140 19174247 -126415041 - L2 LINE L2 -8 3264 3158 726 224 19 6 chr10 19174698 19174854 -126414434 + MER5A DNA MER1_type 32 189 0 1324 186 17 0 chr10 19177359 19177590 -126411698 - MIR SINE MIR -25 237 3 1937 64 113 39 chr10 19178714 19178997 -126410291 + AluY SINE Alu 1 304 -7 1783 173 14 0 chr10 19179008 19179297 -126409991 + AluJo SINE Alu 1 293 -19 2240 99 0 0 chr10 19179301 19179603 -126409685 + AluSg SINE Alu 1 302 0 761 168 74 0 chr10 19180496 19180645 -126408643 - L1MB2 LINE L1 -18 6153 5994 2094 130 10 0 chr10 19180861 19181161 -126408127 + AluSx SINE Alu 1 303 -9 29 78 0 0 chr10 19181585 19181649 -126407639 + AT_rich Low_complexity Low_complexity 1 64 0 1623 155 125 39 chr10 19182127 19182463 -126406825 - MLT1A1 LTR MaLR 0 365 1 1609 215 7 0 chr10 19182523 19182825 -126406463 + AluJo SINE Alu 1 304 -8 1677 163 0 23 chr10 19182848 19183148 -126406140 + AluJo SINE Alu 5 297 -15 910 150 0 0 chr10 19183690 19183830 -126405458 + AluJb SINE Alu 1 140 -172 2032 122 0 0 chr10 19183843 19184113 -126405175 + AluSx SINE Alu 20 289 -23 1526 171 25 22 chr10 19184113 19184388 -126404900 + MSTB LTR MaLR 147 422 -4 585 285 140 12 chr10 19184397 19184804 -126404484 + LTR33 LTR ERVL 45 503 -18 2233 80 28 0 chr10 19185434 19185721 -126403567 + AluSx SINE Alu 1 295 -17 278 271 8 0 chr10 19186073 19186191 -126403097 + (TA)n Simple_repeat Simple_repeat 2 120 0 26 0 0 0 chr10 19186545 19186571 -126402717 + AT_rich Low_complexity Low_complexity 1 26 0 2438 93 0 0 chr10 19187605 19187917 -126401371 + AluSx SINE Alu 1 312 0 22 80 0 0 chr10 19188721 19188771 -126400517 + AT_rich Low_complexity Low_complexity 1 50 0 452 316 75 5 chr10 19192303 19192490 -126396798 - MIR SINE MIR -3 259 60 2403 42 0 78 chr10 19192516 19192850 -126396438 + AluY SINE Alu 4 311 0 243 154 39 0 chr10 19192893 19192945 -126396343 + (TTCA)n Simple_repeat Simple_repeat 1 54 0 205 233 0 0 chr10 19193107 19193150 -126396138 - MIR SINE MIR -37 225 183 865 125 0 0 chr10 19193804 19193924 -126395364 - AluSg/x SINE Alu -18 294 175 2112 116 13 7 chr10 19194814 19195115 -126394173 + AluSx SINE Alu 1 303 -9 1193 194 184 3 chr10 19195784 19196093 -126393195 - MLT1A1 LTR MaLR 0 365 1 2227 116 3 0 chr10 19197029 19197340 -126391948 + AluSx SINE Alu 1 312 0 2452 99 5 27 chr10 19197477 19197879 -126391409 - L1MA2 LINE L1 0 6304 5912 22 0 0 0 chr10 19200027 19200049 -126389239 + AT_rich Low_complexity Low_complexity 1 22 0 3492 97 57 0 chr10 19200510 19201017 -126388271 + L1PA10 LINE L1 5617 6152 -16 315 304 22 22 chr10 19202250 19202385 -126386903 - LTR16C LTR ERVL 0 491 357 3912 103 4 2 chr10 19203237 19203790 -126385498 - MER41A LTR ERV1 0 554 1 3301 98 16 18 chr10 19203928 19204418 -126384870 + MER1A DNA MER1_type 40 528 -1 30 69 0 0 chr10 19204812 19204870 -126384418 + AT_rich Low_complexity Low_complexity 1 58 0 1212 111 60 18 chr10 19206574 19206791 -126382497 + Tigger2a DNA MER2_type 1 226 -208 195 42 0 0 chr10 19206867 19206891 -126382397 + (TTCC)n Simple_repeat Simple_repeat 1 24 0 2035 139 3 0 chr10 19206891 19207179 -126382109 - AluSx SINE Alu -19 293 5 1337 134 45 0 chr10 19207180 19207404 -126381884 + Tigger2a DNA MER2_type 191 424 -10 2306 87 3 3 chr10 19208381 19208680 -126380608 + AluSc SINE Alu 1 299 -10 30 45 0 0 chr10 19208890 19208934 -126380354 + AT_rich Low_complexity Low_complexity 1 44 0 2755 211 35 13 chr10 19209049 19209141 -126380147 - L1 LINE L1 -1105 5041 4952 1672 186 3 14 chr10 19209141 19209465 -126379823 - AluJo SINE Alu 0 321 1 2755 211 35 13 chr10 19209465 19210124 -126379164 - L1 LINE L1 -1194 4952 4273 25 0 0 0 chr10 19211426 19211451 -126377837 + AT_rich Low_complexity Low_complexity 1 25 0 365 194 65 0 chr10 19211586 19211679 -126377609 + Charlie5 DNA MER1_type 1 99 -2513 5031 176 32 13 chr10 19211679 19212830 -126376458 - L1MC1 LINE L1 -11 7760 6589 571 114 23 0 chr10 19212830 19212918 -126376370 + LTR23 LTR ERV1 320 409 -28 7930 264 34 31 chr10 19212928 19213109 -126376179 - L1MC1 LINE L1 -985 6599 6420 2001 91 0 0 chr10 19213109 19213352 -126375936 - AluSg SINE Alu -18 292 50 7930 264 34 31 chr10 19213352 19215778 -126373510 - L1MC1 LINE L1 -1164 6420 4002 5060 150 8 0 chr10 19215778 19217115 -126372173 - L1PA15 LINE L1 0 6165 4799 7930 264 34 31 chr10 19217115 19220464 -126368824 - L1MC1 LINE L1 -3582 4002 7 6706 187 69 13 chr10 19220473 19221027 -126368261 - L1MCa LINE L1 -3572 2854 2333 4883 40 0 2 chr10 19221027 19221623 -126367665 - L1PA4 LINE L1 0 6155 5561 6706 187 69 13 chr10 19221623 19223597 -126365691 - L1MCa LINE L1 -4093 2333 58 2159 112 0 0 chr10 19224508 19224810 -126364478 - AluSx SINE Alu 0 306 5 1080 75 8 0 chr10 19224832 19224965 -126364323 - AluSc SINE Alu -175 134 1 24 53 0 0 chr10 19225585 19225623 -126363665 + AT_rich Low_complexity Low_complexity 1 38 0 2057 75 90 7 chr10 19226054 19226333 -126362955 - AluY SINE Alu -9 302 1 1239 13 0 20 chr10 19226391 19226583 -126362705 - L1PA2 LINE L1 0 6155 6008 917 161 16 31 chr10 19226717 19226909 -126362379 - MLT1D LTR MaLR 0 505 317 2313 116 0 6 chr10 19227044 19227355 -126361933 + AluSx SINE Alu 1 309 -3 2151 123 7 3 chr10 19227497 19227805 -126361483 + AluSc SINE Alu 1 309 0 1977 95 8 11 chr10 19228148 19228442 -126360846 + AluSq SINE Alu 24 316 0 192 77 0 0 chr10 19228972 19228998 -126360290 + (GGA)n Simple_repeat Simple_repeat 2 27 0 1762 201 7 0 chr10 19229202 19229496 -126359792 + AluJo SINE Alu 1 296 -16 2250 120 3 0 chr10 19230244 19230543 -126358745 + AluSq SINE Alu 1 300 -13 684 250 26 16 chr10 19230613 19230805 -126358483 + MER20 DNA MER1_type 2 195 -24 1519 133 0 5 chr10 19231054 19231264 -126358024 + AluSg/x SINE Alu 86 294 -18 213 39 0 0 chr10 19231267 19231293 -126357995 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 402 74 0 0 chr10 19231292 19231346 -126357942 + (CA)n Simple_repeat Simple_repeat 2 55 0 1011 161 0 0 chr10 19231360 19231540 -126357748 + (TA)n Simple_repeat Simple_repeat 1 180 0 321 315 0 0 chr10 19231550 19231639 -126357649 - L1MC4 LINE L1 -1340 6702 6614 * 329 311 0 0 chr10 19231591 19231681 -126357607 + L1MC4 LINE L1 6614 6703 -1339 1534 163 76 14 chr10 19231951 19232240 -126357048 + AluJo SINE Alu 1 307 -5 504 267 41 72 chr10 19233793 19233860 -126355428 - MER5A DNA MER1_type 0 189 121 1775 173 0 26 chr10 19233860 19234166 -126355122 + AluJo SINE Alu 1 298 -14 504 267 41 72 chr10 19234166 19234293 -126354995 - MER5A DNA MER1_type -68 121 1 574 302 104 5 chr10 19235839 19236061 -126353227 + MIR SINE MIR 13 256 -6 183 333 48 0 chr10 19236767 19236830 -126352458 - MIR3 SINE MIR -4 204 139 637 232 52 57 chr10 19236842 19237053 -126352235 - MIR SINE MIR -2 260 51 195 354 80 9 chr10 19237063 19237176 -126352112 - MIR SINE MIR -58 150 30 274 306 20 20 chr10 19237389 19237487 -126351801 + MIR3 SINE MIR 78 175 -33 1599 206 63 25 chr10 19237618 19238060 -126351228 + MLT1C LTR MaLR 6 464 -3 2274 110 10 0 chr10 19238065 19238374 -126350914 - AluSx SINE Alu 0 312 1 181 315 46 54 chr10 19238492 19238622 -126350666 + L3 LINE CR1 598 726 -851 302 286 94 36 chr10 19238984 19239208 -126350080 + L1ME4a LINE L1 5816 6052 -69 21 0 0 0 chr10 19239278 19239299 -126349989 + AT_rich Low_complexity Low_complexity 1 21 0 4538 218 113 61 chr10 19239399 19240394 -126348894 + L1MCa LINE L1 21 963 -5463 1714 186 0 0 chr10 19240394 19240668 -126348620 + AluJb SINE Alu 1 274 -38 255 203 0 0 chr10 19240668 19240737 -126348551 + GA-rich Low_complexity Low_complexity 2 70 0 200 119 0 24 chr10 19240737 19240779 -126348509 + (GGGA)n Simple_repeat Simple_repeat 4 44 0 4538 218 113 61 chr10 19240779 19242090 -126347198 + L1MCa LINE L1 962 2544 -3882 728 188 0 16 chr10 19242111 19242239 -126347049 + AluJ SINE Alu 1 126 -186 2412 172 69 6 chr10 19242278 19242785 -126346503 + L1MB3 LINE L1 5631 6169 -14 5762 234 60 27 chr10 19242793 19244731 -126344557 + L1MCa LINE L1 2553 4555 -1871 812 172 57 62 chr10 19244846 19245038 -126344250 + AluJ SINE Alu 120 310 -2 189 283 98 11 chr10 19245173 19245265 -126344023 - MIR SINE MIR -13 249 150 216 328 0 0 chr10 19246339 19246406 -126342882 - MIR SINE MIR -12 250 184 359 253 136 0 chr10 19246566 19246734 -126342554 + MIR SINE MIR 47 248 -14 309 208 52 62 chr10 19246838 19246934 -126342354 - MIR SINE MIR 0 262 168 942 205 35 0 chr10 19246979 19247177 -126342111 + MER7C DNA MER2_type 1 205 -397 1486 150 34 116 chr10 19247177 19247462 -126341826 - MER4A LTR ERV1 0 664 426 3306 66 0 0 chr10 19247462 19247887 -126341401 - L1PA5 LINE L1 0 6154 5730 1486 150 34 116 chr10 19247887 19248041 -126341247 - MER4A LTR ERV1 -238 426 261 608 121 0 10 chr10 19248041 19248140 -126341148 - MER4A LTR ERV1 -566 98 1 1906 144 5 95 chr10 19248141 19248300 -126340988 + MER7C DNA MER2_type 203 375 -2653 1715 103 21 0 chr10 19248300 19248534 -126340754 + AluSg SINE Alu 59 297 -13 1906 144 5 95 chr10 19248534 19248804 -126340484 + MER7C DNA MER2_type 375 593 -9 324 260 39 10 chr10 19248921 19249025 -126340263 - MIR SINE MIR -138 124 18 2298 99 0 3 chr10 19250276 19250580 -126338708 + AluSg SINE Alu 1 303 -7 1014 174 122 4 chr10 19250591 19250861 -126338427 + L1MA4 LINE L1 5991 6292 -8 24 32 0 0 chr10 19250862 19250893 -126338395 + AT_rich Low_complexity Low_complexity 1 31 0 2236 109 0 0 chr10 19251160 19251462 -126337826 + AluSx SINE Alu 1 302 -10 2313 206 42 34 chr10 19251780 19252426 -126336862 - L1MB4 LINE L1 -213 5967 5317 5498 189 11 34 chr10 19252432 19253420 -126335868 - L1MC1 LINE L1 -7 6606 5664 1217 176 30 21 chr10 19253420 19253653 -126335635 - MER46A DNA MER2_type 0 236 2 5498 189 11 34 chr10 19253653 19254247 -126335041 - L1MC1 LINE L1 -949 5664 5058 806 189 0 0 chr10 19254255 19254408 -126334880 + MER46A DNA MER2_type 26 178 -58 4969 242 50 28 chr10 19254409 19254560 -126334728 - L1MC1 LINE L1 -1828 4598 4452 186 43 0 0 chr10 19254560 19254583 -126334705 + (TTTTC)n Simple_repeat Simple_repeat 4 26 0 4969 242 50 28 chr10 19254583 19256210 -126333078 - L1MC1 LINE L1 -1974 4452 2781 2648 169 87 82 chr10 19256239 19256972 -126332316 - L1MC1 LINE L1 -5639 787 51 698 210 55 55 chr10 19256987 19257278 -126332010 - L1MB4 LINE L1 -810 5336 5046 289 287 147 21 chr10 19257312 19257455 -126331833 - MIR SINE MIR -50 212 52 1927 239 43 9 chr10 19257456 19257996 -126331292 + MER99 DNA DNA 2 559 -269 500 229 136 7 chr10 19257983 19258123 -126331165 + MER99 DNA DNA 668 825 -3 * 1070 197 9 21 chr10 19258289 19258522 -126330766 - MLT1D LTR MaLR 0 505 276 1013 198 18 123 chr10 19258538 19258938 -126330350 - MLT1A1 LTR MaLR -5 360 3 3662 179 89 4 chr10 19258938 19259699 -126329589 + LTR1B LTR ERV1 1 826 0 870 227 72 19 chr10 19259705 19259969 -126329319 - MLT1D LTR MaLR -225 280 3 1992 111 9 63 chr10 19260504 19260820 -126328468 + AluSq SINE Alu 1 299 -14 373 290 87 25 chr10 19261170 19261742 -126327546 - L1ME LINE L1 -508 5654 5043 247 349 23 14 chr10 19261748 19261963 -126327325 - L1ME LINE L1 -1134 5012 4796 635 242 8 0 chr10 19262068 19262196 -126327092 - FLAM_A SINE Alu -4 129 1 402 158 53 83 chr10 19262298 19262340 -126326948 - L1ME3A LINE L1 -18 6152 6110 2186 92 0 4 chr10 19262340 19262646 -126326642 + AluSg SINE Alu 1 305 0 402 158 53 83 chr10 19262646 19262735 -126326553 - L1ME3A LINE L1 -60 6110 6024 1833 181 0 0 chr10 19263283 19263582 -126325706 - AluJo SINE Alu -12 300 2 2616 62 0 0 chr10 19263813 19264118 -126325170 + AluY SINE Alu 1 305 -6 272 291 94 55 chr10 19264127 19264254 -126325034 + MIR3 SINE MIR 41 172 -36 220 233 108 50 chr10 19264262 19264317 -126324971 + MIR SINE MIR 132 182 -80 1842 158 44 116 chr10 19264317 19264861 -126324427 + MLT1D LTR MaLR 1 505 0 220 233 108 50 chr10 19264861 19264925 -126324363 + MIR SINE MIR 182 258 -4 234 0 0 0 chr10 19265165 19265191 -126324097 + (TATG)n Simple_repeat Simple_repeat 2 27 0 454 363 39 37 chr10 19265263 19265671 -126323617 + L2 LINE L2 2565 2973 -341 782 233 37 0 chr10 19265935 19266124 -126323164 - MER3 DNA MER1_type -13 196 1 2090 98 26 36 chr10 19266356 19266661 -126322627 - AluSc SINE Alu -7 302 1 295 194 16 0 chr10 19266718 19266780 -126322508 + LTR37A LTR ERV1 116 178 -248 608 231 62 8 chr10 19266809 19267051 -126322237 + LTR37B LTR ERV1 210 464 -4 2214 107 0 10 chr10 19267086 19267384 -126321904 + AluSg1 SINE Alu 1 295 -14 279 26 0 0 chr10 19267699 19267738 -126321550 + LTR37B LTR ERV1 426 464 -4 1648 164 0 74 chr10 19267739 19268063 -126321225 + AluJo SINE Alu 1 300 -12 28 48 0 0 chr10 19268490 19268532 -126320756 + AT_rich Low_complexity Low_complexity 1 42 0 740 258 104 73 chr10 19268548 19268785 -126320503 - MER34 LTR ERV1 -19 523 295 1440 109 45 9 chr10 19268785 19269006 -126320282 + MER30 DNA MER1_type 2 230 0 740 258 104 73 chr10 19269006 19269275 -126320013 - MER34 LTR ERV1 -247 295 1 307 325 167 0 chr10 19269352 19269472 -126319816 - L2 LINE L2 0 3272 3133 311 191 43 9 chr10 19269853 19269968 -126319320 + (TA)n Simple_repeat Simple_repeat 1 119 0 185 220 202 55 chr10 19270978 19271087 -126318201 - MIR3 SINE MIR -54 154 30 533 159 28 11 chr10 19272495 19272671 -126316617 + (TCTCTG)n Simple_repeat Simple_repeat 2 180 0 249 229 189 41 chr10 19273197 19273319 -126315969 - MIR SINE MIR -53 209 70 188 262 157 48 chr10 19273589 19273759 -126315529 + L2 LINE L2 687 886 -2428 197 0 0 67 chr10 19273759 19273789 -126315499 + (TCTCTG)n Simple_repeat Simple_repeat 3 30 0 188 262 157 48 chr10 19273789 19273828 -126315460 + L2 LINE L2 886 919 -2395 * 220 297 198 0 chr10 19273800 19273901 -126315387 + MIR SINE MIR 70 190 -72 184 347 48 16 chr10 19274278 19274402 -126314886 + L2 LINE L2 1290 1417 -1897 187 254 213 57 chr10 19274638 19274760 -126314528 + L2 LINE L2 3173 3313 0 182 185 108 77 chr10 19274763 19274828 -126314460 - MIR3 SINE MIR -50 158 92 243 0 0 0 chr10 19274874 19274901 -126314387 + (ATTG)n Simple_repeat Simple_repeat 1 27 0 1905 114 11 4 chr10 19274901 19275181 -126314107 - AluSx SINE Alu -30 282 1 493 301 193 1 chr10 19275377 19275693 -126313595 + L2 LINE L2 2665 3042 -271 1361 146 0 23 chr10 19276069 19276289 -126312999 + AluJo SINE Alu 85 299 -13 25 31 0 0 chr10 19276291 19276323 -126312965 + AT_rich Low_complexity Low_complexity 1 32 0 300 219 62 0 chr10 19277922 19277986 -126311302 + L2 LINE L2 3205 3272 0 3651 28 13 0 chr10 19277989 19278447 -126310841 - L1PA5 LINE L1 -436 5719 5256 3807 33 2 0 chr10 19278447 19278896 -126310392 + L1PA5 LINE L1 5700 6153 -1 3360 156 23 26 chr10 19279738 19280115 -126309173 - LTR36 LTR ERV1 -2 609 233 2328 94 7 0 chr10 19280115 19280422 -126308866 - AluSx SINE Alu -3 309 1 3360 156 23 26 chr10 19280422 19280655 -126308633 - LTR36 LTR ERV1 -378 233 1 208 307 35 44 chr10 19280978 19281092 -126308196 - L2 LINE L2 -23 3249 3137 305 284 142 22 chr10 19281592 19281726 -126307562 + MIR SINE MIR 34 183 -79 2282 87 3 3 chr10 19282560 19282858 -126306430 - AluSc SINE Alu -11 298 1 2311 97 0 3 chr10 19283496 19283806 -126305482 - AluY SINE Alu -2 309 1 490 216 151 8 chr10 19283810 19284069 -126305219 + LTR37A LTR ERV1 78 373 -53 384 207 43 9 chr10 19284074 19284190 -126305098 + LTR37A LTR ERV1 289 408 -18 1573 234 26 86 chr10 19284262 19284785 -126304503 + LTR9 LTR ERV1 1 479 -133 2213 103 6 10 chr10 19284785 19285096 -126304192 - AluSx SINE Alu -2 310 1 1573 234 26 86 chr10 19285096 19285223 -126304065 + LTR9 LTR ERV1 479 612 0 2151 105 20 3 chr10 19286042 19286346 -126302942 + AluY SINE Alu 1 309 -2 275 291 77 56 chr10 19286570 19286766 -126302522 + MIR SINE MIR 20 219 -43 1709 181 0 30 chr10 19287532 19287836 -126301452 - AluJb SINE Alu -13 299 5 289 216 0 0 chr10 19288223 19288274 -126301014 - MIR SINE MIR -79 129 79 27 29 0 0 chr10 19290712 19290746 -126298542 + AT_rich Low_complexity Low_complexity 1 34 0 504 272 103 5 chr10 19290746 19290930 -126298358 - MIR SINE MIR 0 262 61 280 271 0 0 chr10 19291305 19291364 -126297924 - MER113 DNA MER1_type? -5 516 458 25 31 0 0 chr10 19291472 19291504 -126297784 + AT_rich Low_complexity Low_complexity 1 32 0 705 318 28 16 chr10 19291636 19291888 -126297400 - MIR SINE MIR -1 261 7 244 220 9 28 chr10 19292212 19292321 -126296967 + (CATA)n Simple_repeat Simple_repeat 4 110 0 276 203 108 14 chr10 19294171 19294245 -126295043 - L2 LINE L2 -3 3310 3230 180 0 0 0 chr10 19295246 19295266 -126294022 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 208 296 126 44 chr10 19296144 19296303 -126292985 + MIR SINE MIR 19 190 -72 1918 114 3 48 chr10 19296328 19296652 -126292636 - AluSc SINE Alu 0 317 7 387 0 0 0 chr10 19296821 19296864 -126292424 + (TG)n Simple_repeat Simple_repeat 2 44 0 482 277 76 64 chr10 19297049 19297378 -126291910 + L2 LINE L2 2136 2468 -846 1718 145 72 3 chr10 19297521 19297811 -126291477 - AluSx SINE Alu -2 310 1 1007 75 0 0 chr10 19298272 19298392 -126290896 + AluSq/x SINE Alu 27 146 -167 463 162 0 0 chr10 19298393 19298467 -126290821 + Alu SINE Alu 237 310 -1 3825 150 60 15 chr10 19298723 19299457 -126289831 + LTR1B LTR ERV1 1 785 0 2493 260 195 23 chr10 19299536 19300546 -126288742 - L2 LINE L2 -632 2682 1499 2364 92 0 0 chr10 19300643 19300948 -126288340 - AluY SINE Alu -2 309 5 383 232 37 18 chr10 19301116 19301340 -126287948 + GA-rich Low_complexity Low_complexity 1 228 0 2213 119 0 6 chr10 19301341 19301652 -126287636 + AluSx SINE Alu 1 309 -3 458 86 0 0 chr10 19302183 19302241 -126287047 + AluYa8 SINE Alu 165 222 -88 28 0 0 0 chr10 19302249 19302277 -126287011 + AT_rich Low_complexity Low_complexity 1 28 0 477 290 11 49 chr10 19303150 19303333 -126285955 - MER69A DNA AcHobo -1 176 1 2047 115 21 7 chr10 19303827 19304114 -126285174 - AluSx SINE Alu -13 299 9 581 211 112 85 chr10 19304129 19304436 -126284852 - L1M4 LINE L1 -991 5155 4835 1465 228 60 20 chr10 19304436 19304787 -126284501 + MLT1A1 LTR MaLR 1 365 0 581 211 112 85 chr10 19304787 19304854 -126284434 - L1M4 LINE L1 -1311 4835 4771 * 1827 253 29 40 chr10 19304850 19305160 -126284128 + L1ME3A LINE L1 5149 5461 -709 1593 268 17 28 chr10 19305160 19305626 -126283662 + LTR40b LTR ERVL 2 462 0 1827 253 29 40 chr10 19305626 19306010 -126283278 + L1ME3A LINE L1 5461 5845 -325 272 348 18 0 chr10 19306127 19306239 -126283049 + L2 LINE L2 1552 1665 -1649 972 267 73 13 chr10 19306240 19306555 -126282733 + L1ME3A LINE L1 5837 6170 0 191 305 63 11 chr10 19306929 19307024 -126282264 - MIR SINE MIR -2 260 161 1941 131 10 20 chr10 19307809 19308107 -126281181 + AluJb SINE Alu 3 297 -15 964 114 34 13 chr10 19308212 19308361 -126280927 - MLT1A1 LTR MaLR -213 152 1 2800 87 19 5 chr10 19308646 19309014 -126280274 + THE1C LTR MaLR 1 373 -2 225 196 0 0 chr10 19309224 19309280 -126280008 + (TA)n Simple_repeat Simple_repeat 2 57 0 3296 43 0 0 chr10 19310009 19310377 -126278911 - L1PA4 LINE L1 -11 6144 5777 1771 148 4 14 chr10 19310467 19310744 -126278544 - AluJo SINE Alu -15 297 24 294 47 58 47 chr10 19310809 19310895 -126278393 + (TG)n Simple_repeat Simple_repeat 2 88 0 254 134 56 26 chr10 19310942 19311132 -126278156 + (TG)n Simple_repeat Simple_repeat 1 238 0 239 106 61 45 chr10 19311286 19311352 -126277936 + (TG)n Simple_repeat Simple_repeat 1 67 0 222 310 138 35 chr10 19311722 19311896 -126277392 - MIR SINE MIR -64 198 7 279 190 0 0 chr10 19312057 19312115 -126277173 + CT-rich Low_complexity Low_complexity 3 60 0 186 191 0 0 chr10 19312282 19312324 -126276964 + (CATATA)n Simple_repeat Simple_repeat 4 45 0 567 218 103 6 chr10 19312351 19312507 -126276781 + MIR SINE MIR 81 251 -11 1441 185 56 87 chr10 19312646 19313110 -126276178 + MER66A LTR ERV1 99 478 0 288 299 19 65 chr10 19313915 19314022 -126275266 - MIR3 SINE MIR -3 205 104 3077 224 30 5 chr10 19315654 19316398 -126272890 + L1M4 LINE L1 3963 4724 -1422 646 197 26 46 chr10 19316413 19316565 -126272723 + L1MB5 LINE L1 6026 6174 0 225 351 129 12 chr10 19317045 19317216 -126272072 + MIR SINE MIR 66 256 -6 220 315 195 0 chr10 19317384 19317533 -126271755 - L3b LINE CR1 -259 1324 1147 1940 115 7 28 chr10 19318111 19318398 -126270890 + AluSx SINE Alu 1 281 -31 405 0 0 0 chr10 19318398 19318443 -126270845 + (CA)n Simple_repeat Simple_repeat 1 45 0 937 191 94 83 chr10 19318506 19318902 -126270386 + L1M4 LINE L1 4752 5285 -861 2186 116 0 0 chr10 19318902 19319203 -126270085 + AluSc SINE Alu 1 301 -8 937 191 94 83 chr10 19319203 19319290 -126269998 + L1M4 LINE L1 5285 5369 -777 2203 169 5 10 chr10 19319290 19319680 -126269608 - L1M3 LINE L1 -381 5802 5415 42746 34 22 21 chr10 19319829 19325844 -126263444 - L1PA2 LINE L1 -135 6020 1 441 0 0 0 chr10 19325915 19325964 -126263324 + (TA)n Simple_repeat Simple_repeat 1 49 0 2010 141 7 0 chr10 19325964 19326255 -126263033 - AluSq SINE Alu -20 293 1 252 324 89 23 chr10 19326622 19326768 -126262520 + MIR3 SINE MIR 38 188 -54 746 186 6 14 chr10 19327280 19327323 -126261965 - L1M2 LINE L1 -696 5478 5436 2310 93 0 3 chr10 19327323 19327623 -126261665 - AluY SINE Alu -12 299 1 195 42 0 0 chr10 19327625 19327649 -126261639 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 746 186 6 14 chr10 19327649 19327798 -126261490 - L1M2 LINE L1 -739 5435 5330 1695 160 0 7 chr10 19327798 19328086 -126261202 - AluY SINE Alu -25 286 1 746 186 6 14 chr10 19328086 19328139 -126261149 - L1M2 LINE L1 -844 5330 5278 2432 73 0 7 chr10 19329690 19329991 -126259297 + AluY SINE Alu 1 299 -12 2292 108 0 3 chr10 19330366 19330671 -126258617 + AluSq SINE Alu 1 304 -9 2216 121 0 0 chr10 19330765 19331063 -126258225 + AluSx SINE Alu 1 298 -14 1658 152 0 0 chr10 19331338 19331582 -126257706 - AluJb SINE Alu -68 244 1 1763 157 19 28 chr10 19333897 19334221 -126255067 + L1MB5 LINE L1 5854 6174 0 239 293 30 40 chr10 19334479 19334578 -126254710 + MIR SINE MIR 40 137 -125 989 283 47 24 chr10 19334607 19334989 -126254299 - MER110 LTR ERV1 -20 471 81 292 276 89 24 chr10 19335352 19335475 -126253813 + MIR SINE MIR 16 146 -62 22 0 0 0 chr10 19335543 19335565 -126253723 + AT_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr10 19335934 19335956 -126253332 + (TTTTTG)n Simple_repeat Simple_repeat 1 22 0 212 331 86 43 chr10 19336084 19336247 -126253041 + MIR3 SINE MIR 18 187 -21 2274 110 0 3 chr10 19336726 19337036 -126252252 - AluSx SINE Alu -3 309 1 1952 133 21 0 chr10 19337487 19337772 -126251516 + AluSx SINE Alu 1 291 -21 487 188 149 53 chr10 19338861 19339217 -126250071 + Zaphod DNA AcHobo 601 990 -3041 363 270 36 0 chr10 19339256 19339393 -126249895 + L1M4 LINE L1 3047 3188 -2958 833 246 116 69 chr10 19339417 19339926 -126249362 + L1MEc LINE L1 1389 1921 -4475 2248 66 4 7 chr10 19339967 19340241 -126249047 - L1PA8 LINE L1 -3 6169 5897 1592 61 0 0 chr10 19340244 19340441 -126248847 + L1PA8 LINE L1 5682 5878 -294 1355 244 66 15 chr10 19340436 19341100 -126248188 + L1MEc LINE L1 1961 2609 -3606 * 725 248 56 85 chr10 19342055 19342374 -126246914 + MLT1J1 LTR MaLR 12 321 -125 363 236 56 49 chr10 19343777 19343921 -126245367 - L2 LINE L2 0 3313 3169 561 68 0 0 chr10 19344219 19344293 -126244995 + (TTCC)n Simple_repeat Simple_repeat 2 75 0 5475 126 6 0 chr10 19344827 19345650 -126243638 - L1PB1 LINE L1 -1 6150 5323 1071 69 0 8 chr10 19345960 19346091 -126243197 + AluSg SINE Alu 5 134 -176 2307 99 0 7 chr10 19346091 19346395 -126242893 + AluSq SINE Alu 1 302 -11 2052 110 0 0 chr10 19346629 19346939 -126242349 + AluSx SINE Alu 1 310 0 328 249 118 81 chr10 19347556 19347777 -126241511 + L1M2 LINE L1 779 1007 -5842 205 298 0 0 chr10 19349067 19349124 -126240164 + (TA)n Simple_repeat Simple_repeat 2 58 0 184 302 0 0 chr10 19349913 19349956 -126239332 - L2 LINE L2 -83 3230 3188 2133 111 0 7 chr10 19351187 19351514 -126237774 - AluSx SINE Alu 0 325 1 1639 185 13 4 chr10 19351690 19352018 -126237270 + MER33 DNA MER1_type 1 323 -1 2038 140 0 16 chr10 19353441 19353611 -126235677 - AluSx SINE Alu -9 303 139 2092 117 0 26 chr10 19353611 19353920 -126235368 - AluSx SINE Alu -11 301 1 2038 140 0 16 chr10 19353920 19354057 -126235231 - AluSx SINE Alu -173 139 1 1841 159 7 39 chr10 19355847 19356156 -126233132 + AluJo SINE Alu 1 299 -13 22 35 0 0 chr10 19356306 19356335 -126232953 + AT_rich Low_complexity Low_complexity 1 29 0 395 285 38 44 chr10 19356974 19357132 -126232156 - MIR SINE MIR -18 244 88 2311 102 3 0 chr10 19357516 19357819 -126231469 + AluSp SINE Alu 1 304 -9 225 0 0 0 chr10 19357990 19358015 -126231273 + (T)n Simple_repeat Simple_repeat 1 25 0 249 57 0 0 chr10 19359844 19359879 -126229409 + (A)n Simple_repeat Simple_repeat 1 35 0 2116 120 0 0 chr10 19360693 19361015 -126228273 - AluSx SINE Alu 0 323 2 1178 201 135 66 chr10 19361465 19361592 -126227696 + MLT1B LTR MaLR 1 118 -272 2279 119 0 0 chr10 19361592 19361902 -126227386 - AluSx SINE Alu -2 310 1 1178 201 135 66 chr10 19361902 19362137 -126227151 + MLT1B LTR MaLR 118 388 -2 2220 251 46 42 chr10 19362184 19362941 -126226347 - L1ME3A LINE L1 -7 6163 5404 294 73 0 0 chr10 19362985 19363026 -126226262 + (GA)n Simple_repeat Simple_repeat 2 42 0 208 132 0 38 chr10 19363032 19363085 -126226203 + (TA)n Simple_repeat Simple_repeat 1 51 0 25 0 0 0 chr10 19363170 19363195 -126226093 + AT_rich Low_complexity Low_complexity 1 25 0 2060 87 0 99 chr10 19363881 19364213 -126225075 + AluSp SINE Alu 1 299 -14 650 298 101 0 chr10 19364392 19364620 -126224668 + MIR SINE MIR 12 262 0 432 290 51 7 chr10 19364729 19364867 -126224421 - MIR SINE MIR -116 146 3 218 316 0 0 chr10 19366144 19366201 -126223087 + CT-rich Low_complexity Low_complexity 2 58 0 1700 137 0 29 chr10 19368818 19369095 -126220193 + AluSx SINE Alu 43 311 -1 319 284 119 8 chr10 19370303 19370437 -126218851 - MIR SINE MIR -24 238 90 204 40 0 0 chr10 19372598 19372623 -126216665 + (TTCA)n Simple_repeat Simple_repeat 3 27 0 211 288 45 68 chr10 19372778 19372955 -126216333 - L2 LINE L2 -180 3092 2920 1082 177 6 0 chr10 19373117 19373298 -126215990 - AluSg/x SINE Alu -42 268 87 1672 131 123 0 chr10 19373940 19374200 -126215088 - AluSx SINE Alu -20 292 1 1644 68 0 5 chr10 19374376 19374582 -126214706 + L1PA4 LINE L1 5951 6155 0 1958 179 8 17 chr10 19374790 19375147 -126214141 + L1PA16 LINE L1 5813 6166 0 295 306 83 0 chr10 19375259 19375380 -126213908 + MIR SINE MIR 24 154 -108 866 145 101 0 chr10 19375814 19375952 -126213336 + FRAM SINE Alu 1 152 -24 264 30 0 0 chr10 19376172 19376205 -126213083 + (TG)n Simple_repeat Simple_repeat 2 34 0 29 18 0 55 chr10 19376841 19376896 -126212392 + AT_rich Low_complexity Low_complexity 1 52 0 805 282 241 10 chr10 19377478 19377893 -126211395 - MLT1K LTR MaLR -3 585 75 2117 125 20 0 chr10 19378549 19378852 -126210436 - AluSq SINE Alu -4 309 1 2134 119 0 20 chr10 19379744 19380046 -126209242 - AluSx SINE Alu -16 296 1 1161 188 86 139 chr10 19381324 19381486 -126207802 - MER4C LTR ERV1 -1 464 295 1232 151 192 41 chr10 19381486 19381757 -126207531 + AluJb SINE Alu 1 312 0 1161 188 86 139 chr10 19381757 19382084 -126207204 - MER4C LTR ERV1 -170 295 1 23 0 0 0 chr10 19382679 19382702 -126206586 + AT_rich Low_complexity Low_complexity 1 23 0 402 237 104 22 chr10 19384669 19384804 -126204484 + MIR SINE MIR 104 249 -13 2167 113 0 3 chr10 19384833 19385157 -126204131 + AluSg SINE Alu 1 310 0 1604 190 0 24 chr10 19385711 19386070 -126203218 - AluJo SINE Alu 0 352 1 747 230 26 7 chr10 19386330 19386482 -126202806 + FRAM SINE Alu 1 155 -11 332 207 45 117 chr10 19386593 19386688 -126202600 - L1ME4a LINE L1 -3 6118 6018 2187 109 3 3 chr10 19386688 19386990 -126202298 + AluSx SINE Alu 1 302 -10 332 207 45 117 chr10 19386990 19387160 -126202128 - L1ME4a LINE L1 -103 6018 5872 365 324 105 5 chr10 19387177 19387396 -126201892 + MIR SINE MIR 9 249 -13 21 36 0 0 chr10 19387475 19387503 -126201785 + AT_rich Low_complexity Low_complexity 1 28 0 2701 99 31 6 chr10 19387543 19387898 -126201390 - THE1B LTR MaLR 0 364 1 584 289 21 5 chr10 19388027 19388214 -126201074 + MIR SINE MIR 58 247 -15 1790 191 13 43 chr10 19388498 19388804 -126200484 - L1MC3 LINE L1 -13 7772 7458 870 143 0 71 chr10 19388804 19388838 -126200450 - L1PA11 LINE L1 0 6174 6139 237 108 0 0 chr10 19388838 19388875 -126200413 + (CAATT)n Simple_repeat Simple_repeat 4 40 0 870 143 0 71 chr10 19388875 19389008 -126200280 - L1PA11 LINE L1 -35 6139 6019 1663 158 8 8 chr10 19389008 19389274 -126200014 - AluJb SINE Alu -40 272 7 1790 191 13 43 chr10 19389274 19389358 -126199930 - L1MC3 LINE L1 -325 7460 7393 280 103 172 0 chr10 19389356 19389414 -126199874 - L1MB7 LINE L1 0 6184 6117 * 659 289 141 0 chr10 19389900 19390170 -126199118 - L2 LINE L2 0 3313 3006 3109 101 7 30 chr10 19390239 19390278 -126199010 - MSTA LTR MaLR -2 426 388 2343 102 3 0 chr10 19390278 19390583 -126198705 + AluSp SINE Alu 1 306 -7 3109 101 7 30 chr10 19390583 19390979 -126198309 - MSTA LTR MaLR -40 388 1 239 261 91 0 chr10 19391063 19391151 -126198137 + LTR11 LTR ERV 401 496 -188 265 253 13 0 chr10 19391201 19391276 -126198012 - L2 LINE L2 -183 3089 3014 21 36 0 0 chr10 19392243 19392271 -126197017 + AT_rich Low_complexity Low_complexity 1 28 0 516 189 0 0 chr10 19392330 19392473 -126196815 + CT-rich Low_complexity Low_complexity 1 143 0 1534 154 44 22 chr10 19392473 19392745 -126196543 - AluJo SINE Alu -34 278 1 247 247 0 14 chr10 19392766 19392839 -126196449 - L1ME4a LINE L1 -3 6118 6047 978 150 0 35 chr10 19393113 19393286 -126196002 - AluJo SINE Alu -25 287 121 614 304 124 34 chr10 19393533 19394056 -126195232 - L1ME4a LINE L1 -139 5982 5413 465 323 71 24 chr10 19394966 19395304 -126193984 - L2 LINE L2 -463 2851 2498 344 304 58 58 chr10 19395309 19395516 -126193772 - MIR SINE MIR -48 214 8 3719 124 4 0 chr10 19395589 19396122 -126193166 - L1PB1 LINE L1 -4 6147 5613 189 0 0 0 chr10 19396409 19396430 -126192858 + (TTCA)n Simple_repeat Simple_repeat 4 24 0 849 179 0 24 chr10 19396477 19396645 -126192643 - FRAM SINE Alu -5 171 8 3419 197 14 31 chr10 19396648 19397176 -126192112 - L1MB5 LINE L1 -37 6137 5622 1303 72 15 26 chr10 19397176 19397371 -126191917 - L1MA4 LINE L1 -1 6299 6107 3419 197 14 31 chr10 19397371 19397546 -126191742 - L1MB5 LINE L1 -552 5622 5446 600 302 44 44 chr10 19397904 19398219 -126191069 - L2 LINE L2 0 3313 2999 639 200 106 64 chr10 19400163 19400398 -126188890 - MIR SINE MIR -17 245 1 1833 127 3 77 chr10 19400434 19400757 -126188531 - AluJb SINE Alu -13 299 1 355 145 0 26 chr10 19401106 19401182 -126188106 + (TCTCC)n Simple_repeat Simple_repeat 2 75 0 320 295 45 27 chr10 19401287 19401399 -126187889 + L2 LINE L2 3159 3272 0 501 244 43 13 chr10 19401473 19401653 -126187635 - MLT1L LTR MaLR 0 615 397 315 279 38 0 chr10 19401735 19401814 -126187474 - MLT1L LTR MaLR -346 269 188 229 305 0 0 chr10 19401785 19401844 -126187444 - MLT1K LTR MaLR -357 231 173 * 35 24 0 0 chr10 19402025 19402067 -126187221 + AT_rich Low_complexity Low_complexity 1 42 0 247 203 39 55 chr10 19402089 19402271 -126187017 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 * 294 222 60 18 chr10 19402182 19402349 -126186939 + (TA)n Simple_repeat Simple_repeat 2 175 0 21 57 0 0 chr10 19402395 19402430 -126186858 + AT_rich Low_complexity Low_complexity 1 35 0 1118 294 109 29 chr10 19403327 19404081 -126185207 - L2 LINE L2 -13 3300 2484 390 21 0 0 chr10 19404081 19404128 -126185160 + (TG)n Simple_repeat Simple_repeat 2 48 0 1118 294 109 29 chr10 19404128 19404161 -126185127 - L2 LINE L2 -829 2484 2455 53 17 0 0 chr10 19404621 19404681 -126184607 + AT_rich Low_complexity Low_complexity 1 60 0 184 289 19 0 chr10 19405283 19405335 -126183953 - L2 LINE L2 -1 3271 3219 2130 122 0 0 chr10 19405415 19405702 -126183586 - AluSx SINE Alu -13 299 13 1395 177 25 11 chr10 19405718 19405995 -126183293 - L1MA5A LINE L1 -2 6295 6015 243 301 62 0 chr10 19406672 19406785 -126182503 + MIR SINE MIR 126 245 -17 204 256 51 51 chr10 19408701 19408779 -126180509 + MIR SINE MIR 35 112 -150 352 272 24 104 chr10 19408826 19408951 -126180337 + L2 LINE L2 3199 3313 0 638 284 120 9 chr10 19409316 19409541 -126179747 + MIR SINE MIR 13 262 0 2115 130 0 16 chr10 19410125 19410432 -126178856 - AluSx SINE Alu -10 302 1 1389 111 94 148 chr10 19411014 19411146 -126178142 + MER44D DNA MER2_type 1 139 -2352 2070 126 0 0 chr10 19411146 19411432 -126177856 - AluSx SINE Alu -10 302 17 1389 111 94 148 chr10 19411432 19411650 -126177638 + MER44D DNA MER2_type 139 602 -7 264 151 75 0 chr10 19411938 19411991 -126177297 + L1MA8 LINE L1 6232 6288 -3 815 158 0 0 chr10 19412324 19412444 -126176844 + FLAM_C SINE Alu 1 120 -23 1835 137 3 7 chr10 19412490 19412774 -126176514 + AluJo SINE Alu 23 305 -7 486 270 38 27 chr10 19414640 19414825 -126174463 + MIR SINE MIR 3 189 -73 552 358 29 8 chr10 19414994 19415240 -126174048 + MIR SINE MIR 12 262 0 217 242 0 45 chr10 19415298 19415364 -126173924 + GA-rich Low_complexity Low_complexity 5 67 0 21 0 0 0 chr10 19415710 19415731 -126173557 + AT_rich Low_complexity Low_complexity 1 21 0 409 304 45 56 chr10 19415810 19416096 -126173192 - L1ME3A LINE L1 -241 5929 5647 359 294 56 13 chr10 19416276 19416455 -126172833 - L1ME3A LINE L1 -479 5642 5458 344 283 86 0 chr10 19416485 19416683 -126172605 - L1ME3A LINE L1 -814 5332 5118 196 271 43 14 chr10 19417399 19417469 -126171819 + MIR3 SINE MIR 96 167 -41 2316 112 0 3 chr10 19418484 19418796 -126170492 + AluSx SINE Alu 1 311 -1 2033 138 0 3 chr10 19420154 19420443 -126168845 + AluSq SINE Alu 1 288 -25 185 286 186 0 chr10 19421169 19421239 -126168049 - L2 LINE L2 0 3272 3190 969 257 100 55 chr10 19421270 19421342 -126167946 - L2 LINE L2 -90 3223 3156 2146 136 0 0 chr10 19421342 19421651 -126167637 + AluSx SINE Alu 1 309 -3 969 257 100 55 chr10 19421651 19421979 -126167309 - L2 LINE L2 -157 3156 2805 193 328 15 15 chr10 19422556 19422623 -126166665 - MIR3 SINE MIR -31 177 111 1817 139 55 0 chr10 19422740 19423014 -126166274 + AluY SINE Alu 1 289 -22 1950 165 0 3 chr10 19423022 19423319 -126165969 + AluJb SINE Alu 1 296 -16 1907 139 14 3 chr10 19423912 19424206 -126165082 - AluSx SINE Alu -15 297 1 23 0 0 0 chr10 19424235 19424258 -126165030 + AT_rich Low_complexity Low_complexity 1 23 0 229 65 0 0 chr10 19424258 19424304 -126164984 - LTR66 LTR ERVL -171 439 394 252 213 0 0 chr10 19424304 19424365 -126164923 + L1MC4 LINE L1 6636 6696 -1346 522 0 0 0 chr10 19424366 19424424 -126164864 + (GA)n Simple_repeat Simple_repeat 2 59 0 824 139 49 0 chr10 19424536 19424658 -126164630 - AluSq/x SINE Alu -184 129 2 2248 154 0 23 chr10 19424688 19425032 -126164256 + MER1B DNA MER1_type 1 336 -1 1911 152 7 10 chr10 19425495 19425797 -126163491 + AluSx SINE Alu 3 303 -9 1280 237 78 72 chr10 19426015 19426490 -126162798 + L1MC5 LINE L1 7101 7583 -378 366 23 0 0 chr10 19426490 19426533 -126162755 + (CA)n Simple_repeat Simple_repeat 2 44 0 1280 237 78 72 chr10 19426533 19426728 -126162560 + L1MC5 LINE L1 7583 7775 -186 2177 124 0 0 chr10 19426755 19427053 -126162235 + AluSx SINE Alu 1 298 -14 240 207 207 50 chr10 19429468 19429589 -126159699 - MIR SINE MIR -82 180 41 404 167 22 0 chr10 19429639 19429729 -126159559 + CT-rich Low_complexity Low_complexity 1 92 0 1688 199 7 0 chr10 19429729 19430035 -126159253 - AluJb SINE Alu -4 308 1 1971 159 0 0 chr10 19430111 19430420 -126158868 - AluJb SINE Alu -1 311 3 201 207 17 52 chr10 19430612 19430670 -126158618 - MIR SINE MIR -112 96 41 1426 218 93 34 chr10 19431596 19432013 -126157275 - LTR47B LTR ERVL 0 443 2 180 143 0 0 chr10 19432223 19432236 -126157052 + (A)n Simple_repeat Simple_repeat 1 13 -22 2174 108 0 31 chr10 19432236 19432559 -126156729 + AluSq SINE Alu 1 313 0 180 143 0 0 chr10 19432559 19432580 -126156708 + (A)n Simple_repeat Simple_repeat 12 35 0 247 271 29 0 chr10 19432660 19432730 -126156558 + MIR SINE MIR 31 102 -160 2166 117 3 10 chr10 19432848 19433147 -126156141 - AluSq SINE Alu -16 297 1 2341 93 0 7 chr10 19435277 19435578 -126153710 - AluSx SINE Alu -8 304 6 415 243 0 107 chr10 19436326 19436495 -126152793 - MIR SINE MIR -52 210 60 1698 162 21 10 chr10 19436910 19437200 -126152088 + AluJb SINE Alu 1 293 -19 193 277 108 12 chr10 19437650 19437733 -126151555 + MIR SINE MIR 32 122 -86 188 333 48 48 chr10 19437821 19437926 -126151362 - L2 LINE L2 -10 3303 3199 2950 174 55 5 chr10 19438385 19438965 -126150323 + L1MB3 LINE L1 5532 6140 -43 2684 34 0 0 chr10 19438966 19439264 -126150024 + AluY SINE Alu 1 298 -13 1795 165 0 17 chr10 19439275 19439566 -126149722 + AluJo SINE Alu 1 286 -26 2245 128 141 11 chr10 19439894 19440270 -126149018 + MSTA LTR MaLR 2 426 -2 1917 245 17 21 chr10 19441283 19441752 -126147536 + MLT1C LTR MaLR 1 467 0 250 333 117 17 chr10 19442903 19443023 -126146265 + MIR3 SINE MIR 43 174 -34 3134 94 48 64 chr10 19443269 19443767 -126145521 - L1PB4 LINE L1 0 6156 5667 491 320 80 40 chr10 19444625 19445025 -126144263 + L2 LINE L2 2285 2700 -614 1409 138 111 16 chr10 19445112 19445401 -126143887 + MER4A LTR ERV1 264 638 -26 1553 77 5 0 chr10 19445504 19445698 -126143590 + L1PA7 LINE L1 5957 6151 -3 30 27 0 0 chr10 19445830 19445867 -126143421 + AT_rich Low_complexity Low_complexity 1 37 0 342 206 0 0 chr10 19446171 19446244 -126143044 + (TATG)n Simple_repeat Simple_repeat 3 75 0 23 33 0 0 chr10 19446307 19446337 -126142951 + AT_rich Low_complexity Low_complexity 1 30 0 2386 54 6 78 chr10 19446807 19447138 -126142150 + AluY SINE Alu 1 307 -4 2183 153 36 61 chr10 19447577 19448020 -126141268 + MSTB1 LTR MaLR 1 432 0 2786 191 12 18 chr10 19448815 19449319 -126139969 + MLT1D LTR MaLR 5 505 0 1575 186 0 39 chr10 19449424 19449735 -126139553 - AluJo SINE Alu -13 299 1 407 296 177 10 chr10 19450219 19450422 -126138866 + MIR SINE MIR 16 252 -10 22 0 0 0 chr10 19450429 19450451 -126138837 + AT_rich Low_complexity Low_complexity 1 22 0 1817 210 37 68 chr10 19450548 19450681 -126138607 + LTR55 LTR ERV 1 136 -412 1740 171 0 19 chr10 19450681 19450870 -126138418 - AluJo SINE Alu -8 304 122 194 0 39 0 chr10 19450870 19450896 -126138392 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1740 171 0 19 chr10 19450896 19451016 -126138272 - AluJo SINE Alu -190 122 1 1817 210 37 68 chr10 19451016 19451444 -126137844 + LTR55 LTR ERV 136 545 -3 614 200 70 1 chr10 19451719 19451859 -126137429 - MLT1A1 LTR MaLR 0 374 231 1111 153 99 10 chr10 19452016 19452218 -126137070 - MLT1A1 LTR MaLR -145 220 1 2462 303 195 26 chr10 19452832 19454603 -126134685 + L2 LINE L2 965 3046 -267 366 255 37 93 chr10 19455285 19455348 -126133940 + MIR SINE MIR 48 113 -149 2226 115 0 10 chr10 19455348 19455652 -126133636 - AluSx SINE Alu -11 301 1 366 255 37 93 chr10 19455652 19455688 -126133600 + MIR SINE MIR 113 149 -113 2096 149 131 11 chr10 19455688 19456070 -126133218 - MSTA LTR MaLR 0 428 1 366 255 37 93 chr10 19456070 19456130 -126133158 + MIR SINE MIR 149 199 -63 539 283 147 20 chr10 19457100 19457298 -126131990 + MIR SINE MIR 13 235 -27 419 297 173 40 chr10 19459050 19459739 -126129549 + L2 LINE L2 2535 3313 0 1769 161 0 17 chr10 19460762 19461084 -126128204 + AluJb SINE Alu 1 317 0 403 277 107 20 chr10 19461123 19461474 -126127814 - MLT1J LTR MaLR -63 448 6 285 237 0 17 chr10 19461479 19461538 -126127750 - L2 LINE L2 -31 3241 3184 448 357 77 21 chr10 19461657 19461859 -126127429 + L2 LINE L2 2925 3153 -119 2174 115 0 0 chr10 19461859 19462147 -126127141 - AluSx SINE Alu -24 288 1 448 357 77 21 chr10 19462147 19462269 -126127019 + L2 LINE L2 3153 3267 -5 2014 106 11 3 chr10 19462549 19462866 -126126422 + AluSq SINE Alu 1 319 0 1550 185 0 46 chr10 19463386 19463525 -126125763 + AluJo SINE Alu 1 120 -192 1972 127 0 78 chr10 19463525 19463856 -126125432 + AluSx SINE Alu 1 305 -7 1550 185 0 46 chr10 19463856 19464018 -126125270 + AluJo SINE Alu 120 288 -24 24 32 0 0 chr10 19466753 19466784 -126122504 + AT_rich Low_complexity Low_complexity 1 31 0 1457 76 0 0 chr10 19468282 19468467 -126120821 - L1MA2 LINE L1 0 6304 6120 2664 252 51 47 chr10 19468467 19469249 -126120039 - L1ME3A LINE L1 -14 6156 5368 1865 120 74 11 chr10 19469249 19469533 -126119755 - AluSg SINE Alu -8 302 1 2664 252 51 47 chr10 19469533 19469608 -126119680 - L1ME3A LINE L1 -802 5368 5295 457 329 46 20 chr10 19469678 19469931 -126119357 + MIR SINE MIR 3 261 -1 316 371 35 0 chr10 19470317 19470433 -126118855 - MIR SINE MIR -62 146 27 21 0 0 0 chr10 19470486 19470507 -126118781 + AT_rich Low_complexity Low_complexity 1 21 0 2064 116 3 3 chr10 19470709 19471003 -126118285 + AluSx SINE Alu 1 294 -18 323 192 14 0 chr10 19471071 19471144 -126118144 + (TATG)n Simple_repeat Simple_repeat 2 75 0 21 0 0 0 chr10 19471297 19471318 -126117970 + AT_rich Low_complexity Low_complexity 1 21 0 2294 121 0 0 chr10 19471426 19471733 -126117555 + AluSx SINE Alu 1 307 -5 459 245 105 7 chr10 19472002 19472145 -126117143 + MIR SINE MIR 95 251 -11 221 341 63 40 chr10 19472311 19472437 -126116851 - L2 LINE L2 -5 3267 3139 757 303 71 88 chr10 19473693 19474112 -126115176 + L2 LINE L2 2219 2621 -693 2119 176 24 11 chr10 19474112 19474482 -126114806 - THE1C LTR MaLR 0 375 1 757 303 71 88 chr10 19474482 19474812 -126114476 + L2 LINE L2 2621 2955 -359 213 346 0 25 chr10 19474919 19475000 -126114288 + L2 LINE L2 3231 3309 -4 203 88 29 0 chr10 19476109 19476143 -126113145 + (TTTC)n Simple_repeat Simple_repeat 2 36 0 2660 116 17 8 chr10 19476607 19476968 -126112320 + THE1B LTR MaLR 1 364 0 359 323 21 53 chr10 19476970 19477159 -126112129 + MER5A DNA MER1_type 7 189 0 252 256 22 44 chr10 19477405 19477463 -126111825 - MLT1K LTR MaLR -486 102 45 233 29 0 29 chr10 19477463 19477498 -126111790 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 252 256 22 44 chr10 19477498 19477529 -126111759 - MLT1K LTR MaLR -543 45 15 1303 50 0 19 chr10 19479570 19479730 -126109558 + L1PA11 LINE L1 6017 6173 -1 21 36 0 0 chr10 19479731 19479759 -126109529 + AT_rich Low_complexity Low_complexity 1 28 0 259 212 0 91 chr10 19480617 19480683 -126108605 + AluJb SINE Alu 1 60 -242 2050 143 3 0 chr10 19480683 19480976 -126108312 - AluSx SINE Alu -18 294 1 1464 141 0 28 chr10 19480978 19481227 -126108061 + AluJb SINE Alu 52 293 -19 328 358 58 8 chr10 19481781 19481901 -126107387 - L2 LINE L2 0 3272 3147 851 151 0 0 chr10 19482294 19482413 -126106875 + FLAM_C SINE Alu 1 119 -24 21 0 0 0 chr10 19482808 19482829 -126106459 + AT_rich Low_complexity Low_complexity 1 21 0 1963 138 3 3 chr10 19482835 19483124 -126106164 + AluJb SINE Alu 5 293 -19 2042 130 3 0 chr10 19483894 19484178 -126105110 + AluSx SINE Alu 1 285 -27 560 248 177 20 chr10 19484343 19484541 -126104747 - MIR SINE MIR -5 257 29 416 322 57 11 chr10 19484572 19484749 -126104539 - MER91A DNA MER1_type -11 185 1 356 336 65 18 chr10 19484982 19485199 -126104089 - MIR SINE MIR -28 234 8 303 298 53 30 chr10 19485417 19485548 -126103740 - L2 LINE L2 -10 3303 3170 231 274 27 27 chr10 19485720 19485793 -126103495 - LTR16C LTR ERVL -14 477 405 1978 120 0 4 chr10 19485825 19486099 -126103189 + AluSx SINE Alu 33 305 -7 295 258 57 69 chr10 19486581 19486740 -126102548 + MIR SINE MIR 98 254 -8 475 141 0 0 chr10 19486839 19486910 -126102378 - THE1B LTR MaLR 0 375 305 7646 50 2 1 chr10 19486911 19487922 -126101366 + L1PA5 LINE L1 5132 6148 -6 27 0 0 0 chr10 19488156 19488183 -126101105 + AT_rich Low_complexity Low_complexity 1 27 0 2131 99 9 37 chr10 19488183 19488507 -126100781 - THE1B LTR MaLR -49 315 1 834 231 102 106 chr10 19489291 19489781 -126099507 + MLT1G1 LTR MaLR 108 595 0 745 249 95 4 chr10 19489993 19490234 -126099054 - Charlie4a DNA MER1_type -32 476 214 2549 58 0 6 chr10 19490332 19490644 -126098644 + AluY SINE Alu 2 311 0 836 225 48 5 chr10 19490810 19491019 -126098269 - Charlie4a DNA MER1_type -275 233 16 2107 134 0 0 chr10 19491143 19491435 -126097853 + AluSx SINE Alu 1 292 -20 1927 177 44 61 chr10 19491560 19491665 -126097623 - MLT1C LTR MaLR 0 467 362 2038 155 3 0 chr10 19491665 19491969 -126097319 + AluJo SINE Alu 1 305 -7 1927 177 44 61 chr10 19491969 19492338 -126096950 - MLT1C LTR MaLR -105 362 1 261 0 0 0 chr10 19492773 19492802 -126096486 + (CA)n Simple_repeat Simple_repeat 2 30 0 2074 149 0 0 chr10 19492860 19493168 -126096120 + AluSx SINE Alu 2 309 -3 2501 81 0 0 chr10 19493381 19493690 -126095598 - AluY SINE Alu -2 309 1 360 64 0 0 chr10 19494188 19494235 -126095053 + (T)n Simple_repeat Simple_repeat 1 47 0 1401 107 5 0 chr10 19494236 19494423 -126094865 - AluSx SINE Alu -124 188 1 2274 102 0 0 chr10 19496472 19496766 -126092522 + AluSg SINE Alu 1 294 -16 866 288 145 8 chr10 19498485 19498877 -126090411 - L2 LINE L2 -3 3310 2865 234 0 0 0 chr10 19500095 19500121 -126089167 + (T)n Simple_repeat Simple_repeat 1 26 0 471 290 130 10 chr10 19500915 19501122 -126088166 + MIR SINE MIR 1 232 -30 1752 156 3 45 chr10 19501359 19501667 -126087621 + AluJo SINE Alu 1 295 -17 2173 115 3 3 chr10 19502183 19502479 -126086809 + AluSq SINE Alu 1 296 -17 732 174 6 31 chr10 19503016 19503233 -126086055 + L1PA2 LINE L1 5999 6211 0 1031 165 0 0 chr10 19503616 19503774 -126085514 + AluJb SINE Alu 91 248 -64 3110 104 10 16 chr10 19504143 19504631 -126084657 + L1PB1 LINE L1 5666 6150 -1 1625 189 6 25 chr10 19504990 19505308 -126083980 + AluJo SINE Alu 1 312 0 1783 197 0 0 chr10 19505715 19506025 -126083263 - AluJo SINE Alu -2 310 1 313 302 60 20 chr10 19507406 19507555 -126081733 - Charlie8 DNA MER1_type -2260 157 3 882 122 0 0 chr10 19507628 19507751 -126081537 + FRAM SINE Alu 38 160 -16 184 301 56 28 chr10 19507870 19508013 -126081275 - L2 LINE L2 -1392 1922 1776 1979 141 3 0 chr10 19508952 19509242 -126080046 + AluSg SINE Alu 1 291 -19 351 206 206 53 chr10 19509257 19509427 -126079861 + L2 LINE L2 3117 3312 -1 2117 133 0 3 chr10 19509758 19510066 -126079222 - AluSx SINE Alu -1 311 5 945 167 10 16 chr10 19510097 19510289 -126078999 - L1PA15 LINE L1 -22 6143 5953 2261 89 7 3 chr10 19511229 19511533 -126077755 - AluSg SINE Alu -5 305 1 1500 393 3 0 chr10 19512100 19512408 -126076880 + AluSp SINE Alu 1 309 -4 1493 124 0 14 chr10 19512443 19512660 -126076628 - AluSx SINE Alu -96 216 3 238 234 74 84 chr10 19512741 19513040 -126076248 - HAL1 LINE L1 -1401 1106 811 2304 159 26 7 chr10 19513170 19513586 -126075702 - Tigger2a DNA MER2_type -8 426 3 23 0 0 0 chr10 19514131 19514154 -126075134 + AT_rich Low_complexity Low_complexity 1 23 0 189 352 74 0 chr10 19514758 19514866 -126074422 + MIR SINE MIR 147 262 0 844 219 38 9 chr10 19515043 19515253 -126074035 - MER20 DNA MER1_type 0 219 4 2055 121 0 7 chr10 19516829 19517111 -126072177 + AluSx SINE Alu 1 280 -32 266 0 0 29 chr10 19517112 19517147 -126072141 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1403 181 0 110 chr10 19517153 19517489 -126071799 + AluJo SINE Alu 1 299 -3 1326 197 138 26 chr10 19517502 19517893 -126071395 + MER63B DNA MER1_type 2 436 0 204 250 18 0 chr10 19517901 19517957 -126071331 + (TATATG)n Simple_repeat Simple_repeat 2 58 0 1607 218 6 19 chr10 19518224 19518540 -126070748 - AluJo SINE Alu 0 312 1 225 382 15 7 chr10 19518909 19519011 -126070277 + L2 LINE L2 1865 1970 -1344 2636 152 30 14 chr10 19519011 19519505 -126069783 - L1PA16 LINE L1 -1 6165 5664 225 382 15 7 chr10 19519505 19519538 -126069750 + L2 LINE L2 1970 2001 -1313 371 317 10 0 chr10 19519555 19519659 -126069629 - L2 LINE L2 0 3313 3209 6199 103 19 0 chr10 19519676 19521385 -126067903 + L1PA8 LINE L1 4412 6151 -21 38 0 0 0 chr10 19521385 19521423 -126067865 + AT_rich Low_complexity Low_complexity 1 38 0 578 274 98 8 chr10 19521515 19521770 -126067518 - L2 LINE L2 -225 3088 2811 202 156 44 0 chr10 19522088 19522133 -126067155 + (CTTTG)n Simple_repeat Simple_repeat 2 48 0 748 252 65 4 chr10 19522299 19522545 -126066743 + MIR SINE MIR 2 262 0 1670 104 0 0 chr10 19523217 19523458 -126065830 + L1MA1 LINE L1 6054 6294 -8 1871 157 0 10 chr10 19523649 19523949 -126065339 + AluJo SINE Alu 1 297 -15 25 0 0 0 chr10 19524643 19524668 -126064620 + AT_rich Low_complexity Low_complexity 1 25 0 1960 145 13 0 chr10 19524735 19525038 -126064250 - AluJo SINE Alu -5 307 1 230 327 27 36 chr10 19526067 19526177 -126063111 - L2 LINE L2 -211 3061 2953 1953 144 0 35 chr10 19526349 19526661 -126062627 + AluSx SINE Alu 1 301 -11 308 233 70 0 chr10 19526662 19526748 -126062540 - MIR SINE MIR -25 237 146 475 254 16 0 chr10 19526767 19526893 -126062395 + MER45A DNA AcHobo 46 173 -5 1776 167 0 20 chr10 19526972 19527272 -126062016 - AluJo SINE Alu -16 296 3 638 131 42 24 chr10 19527283 19527451 -126061837 + CT-rich Low_complexity Low_complexity 4 174 0 204 195 61 24 chr10 19527466 19527548 -126061740 + CT-rich Low_complexity Low_complexity 4 88 0 1484 182 38 4 chr10 19527550 19527814 -126061474 - AluJb SINE Alu -39 273 1 1981 136 0 7 chr10 19528516 19528802 -126060486 - AluJb SINE Alu -23 289 6 1986 142 3 16 chr10 19529191 19529507 -126059781 - AluSx SINE Alu 0 312 1 809 229 17 22 chr10 19529995 19530174 -126059114 + MER5B DNA MER1_type 1 178 0 272 200 171 0 chr10 19530718 19530788 -126058500 - Charlie1 DNA MER1_type -2678 83 2 204 40 0 0 chr10 19531275 19531300 -126057988 + (A)n Simple_repeat Simple_repeat 1 25 0 2120 123 0 16 chr10 19531601 19531918 -126057370 - AluSx SINE Alu 0 312 1 1572 199 36 0 chr10 19532146 19532423 -126056865 + AluJo SINE Alu 1 287 -25 2252 99 0 0 chr10 19532452 19532744 -126056544 - AluSg SINE Alu -18 292 1 2257 103 0 0 chr10 19532771 19533061 -126056227 - AluSc SINE Alu -19 290 1 897 200 0 18 chr10 19533085 19533250 -126056038 + FRAM SINE Alu 1 162 -4 215 314 121 32 chr10 19533458 19533582 -126055706 - MIR SINE MIR -58 150 16 593 321 88 25 chr10 19533663 19534270 -126055018 - L2 LINE L2 -257 3015 2264 1083 174 5 18 chr10 19536337 19536555 -126052733 - MER20 DNA MER1_type -4 215 1 207 283 221 0 chr10 19536570 19536683 -126052605 - MIR SINE MIR -6 256 119 1697 122 30 64 chr10 19537074 19537369 -126051919 + AluSx SINE Alu 5 289 -23 420 20 0 0 chr10 19537562 19537611 -126051677 + (CA)n Simple_repeat Simple_repeat 2 50 0 570 220 35 78 chr10 19537872 19538114 -126051174 - LTR37B LTR ERV1 -2 466 236 2100 136 7 3 chr10 19538114 19538415 -126050873 + AluSq SINE Alu 1 302 -11 570 220 35 78 chr10 19538415 19538454 -126050834 - LTR37B LTR ERV1 -232 236 197 365 262 35 48 chr10 19538662 19538807 -126050481 - L1ME4a LINE L1 -16 6105 5963 1484 183 98 7 chr10 19538856 19539177 -126050111 - AluJo SINE Alu 0 347 1 22 0 0 0 chr10 19539314 19539336 -126049952 + AT_rich Low_complexity Low_complexity 1 22 0 320 138 0 15 chr10 19539599 19539664 -126049624 - L1MA9 LINE L1 -34 6278 6215 * 1670 183 42 13 chr10 19539639 19540230 -126049058 + L1M2 LINE L1 4929 5535 -743 325 252 205 16 chr10 19540267 19540394 -126048894 - L1ME4a LINE L1 -287 5883 5733 448 171 18 9 chr10 19540395 19540506 -126048782 + CT-rich Low_complexity Low_complexity 1 112 0 1971 159 10 7 chr10 19540506 19540815 -126048473 - AluJo SINE Alu -2 310 1 281 289 61 18 chr10 19540900 19541014 -126048274 - L1ME4a LINE L1 -516 5654 5536 2064 128 0 0 chr10 19541014 19541304 -126047984 + AluSx SINE Alu 1 290 -22 1304 227 40 12 chr10 19541366 19541687 -126047601 - MER58B DNA MER1_type -10 331 2 238 288 96 44 chr10 19541687 19541937 -126047351 - L1M3 LINE L1 -667 5516 5254 739 163 8 0 chr10 19544119 19544242 -126045046 + FLAM_C SINE Alu 1 124 -19 215 137 0 39 chr10 19544594 19544645 -126044643 + (TATATG)n Simple_repeat Simple_repeat 4 52 0 473 295 42 6 chr10 19545130 19545296 -126043992 + MIR SINE MIR 14 185 -77 2063 109 3 11 chr10 19546144 19546427 -126042861 - AluSx SINE Alu -15 297 17 252 152 0 22 chr10 19546463 19546509 -126042779 + AluSp SINE Alu 116 160 -143 194 83 56 0 chr10 19546541 19546577 -126042711 + A-rich Low_complexity Low_complexity 2 39 0 319 285 101 76 chr10 19546677 19547045 -126042243 - L1ME4a LINE L1 -180 5941 5565 445 124 155 21 chr10 19547279 19547376 -126041912 + LTR9B LTR ERV1 449 558 -86 2283 91 0 0 chr10 19547913 19548209 -126041079 - AluSg SINE Alu -14 296 1 1928 143 0 0 chr10 19548389 19548668 -126040620 - AluJb SINE Alu -33 279 1 1675 117 38 62 chr10 19548933 19549248 -126040040 - AluSx SINE Alu 0 308 1 210 330 26 0 chr10 19549250 19549349 -126039939 + MIR SINE MIR 52 153 -61 363 213 0 0 chr10 19550203 19550283 -126039005 + (TGGA)n Simple_repeat Simple_repeat 2 81 0 1974 107 40 0 chr10 19550285 19550557 -126038731 - AluSx SINE Alu -27 285 3 1540 188 7 11 chr10 19550593 19550870 -126038418 + AluJo SINE Alu 1 276 -36 1620 174 31 43 chr10 19551300 19551627 -126037661 + L1MB3 LINE L1 5858 6180 -3 21 36 0 0 chr10 19551684 19551712 -126037576 + AT_rich Low_complexity Low_complexity 1 28 0 2356 82 0 3 chr10 19551719 19552010 -126037278 + AluSq SINE Alu 1 290 -23 183 42 0 0 chr10 19552019 19552043 -126037245 + (TAA)n Simple_repeat Simple_repeat 2 25 0 318 291 27 27 chr10 19552043 19552185 -126037103 - MIR SINE MIR -80 182 41 666 160 0 0 chr10 19552575 19552675 -126036613 - FRAM SINE Alu -22 154 55 189 107 0 0 chr10 19552899 19552927 -126036361 + (T)n Simple_repeat Simple_repeat 1 28 0 2263 102 0 0 chr10 19554887 19555180 -126034108 + AluSg SINE Alu 2 294 -16 195 289 0 60 chr10 19555819 19555902 -126033386 + MIR SINE MIR 76 153 -109 1706 125 33 4 chr10 19556636 19556950 -126032338 + Tigger4(Zombi) DNA MER2_type 1 2725 -6 2247 113 0 6 chr10 19557380 19557691 -126031597 - AluSg1 SINE Alu 0 309 1 180 111 0 0 chr10 19558167 19558194 -126031094 + (TTA)n Simple_repeat Simple_repeat 2 28 0 1849 175 10 0 chr10 19558382 19558685 -126030603 - AluJb SINE Alu -6 306 1 2689 26 3 0 chr10 19558694 19558998 -126030290 - AluY SINE Alu -6 305 1 434 226 105 50 chr10 19559033 19559214 -126030074 - MER20B DNA MER1_type -62 721 531 949 238 70 30 chr10 19559285 19559613 -126029675 - MER20B DNA MER1_type -381 402 62 182 347 105 32 chr10 19559693 19559788 -126029500 + L2 LINE L2 3170 3271 -1 1879 152 0 3 chr10 19559860 19560143 -126029145 - AluSx SINE Alu -30 282 1 309 300 0 0 chr10 19560144 19560224 -126029064 - L2 LINE L2 0 3313 3234 324 0 0 0 chr10 19560253 19560289 -126028999 + (TC)n Simple_repeat Simple_repeat 2 37 0 1889 154 0 7 chr10 19560973 19561291 -126027997 - AluSx SINE Alu 0 316 1 1432 95 0 5 chr10 19561320 19561509 -126027779 - L1PA7 LINE L1 0 6154 5967 246 239 70 0 chr10 19561874 19561945 -126027343 - MIR SINE MIR -85 177 102 1772 155 14 17 chr10 19561950 19562241 -126027047 - AluJo SINE Alu -22 290 1 348 287 70 0 chr10 19562255 19562370 -126026918 - MIR SINE MIR -38 224 102 1725 162 7 24 chr10 19562946 19563243 -126026045 + AluJb SINE Alu 20 311 -1 248 207 9 81 chr10 19563576 19563687 -126025601 - AluJb SINE Alu -169 133 31 1694 118 118 11 chr10 19564251 19564531 -126024757 + AluSg SINE Alu 1 310 0 276 305 62 45 chr10 19565249 19565421 -126023867 + MIR SINE MIR 3 174 -82 1884 136 13 27 chr10 19565542 19565843 -126023445 - AluSq SINE Alu -13 300 4 2160 127 3 0 chr10 19565893 19566192 -126023096 - AluSx SINE Alu -12 300 1 361 342 30 40 chr10 19566577 19566776 -126022512 - MIR3 SINE MIR -4 204 8 276 324 140 0 chr10 19566807 19566943 -126022345 + MIR3 SINE MIR 23 177 -31 2565 53 0 0 chr10 19567777 19568076 -126021212 + AluY SINE Alu 2 300 -11 1441 100 220 17 chr10 19568154 19568395 -126020893 + AluSg1 SINE Alu 1 290 -19 21 0 0 0 chr10 19568871 19568892 -126020396 + AT_rich Low_complexity Low_complexity 1 21 0 2208 123 0 0 chr10 19571215 19571515 -126017773 + AluSx SINE Alu 1 300 -12 770 153 178 13 chr10 19571629 19571786 -126017502 + MER3 DNA MER1_type 1 183 -26 315 247 27 0 chr10 19571807 19571880 -126017408 + MER5A DNA MER1_type 11 85 -104 1909 156 0 19 chr10 19571883 19572190 -126017098 - AluSx SINE Alu -11 301 1 268 296 0 0 chr10 19572425 19572513 -126016775 + (TA)n Simple_repeat Simple_repeat 2 89 0 310 241 118 59 chr10 19572518 19572688 -126016600 - L1ME LINE L1 -418 5703 5524 8071 20 0 4 chr10 19572800 19573999 -126015289 - L1PA4 LINE L1 -2 6153 4949 2090 141 3 0 chr10 19573999 19574296 -126014992 - AluSq SINE Alu -14 299 2 8071 20 0 4 chr10 19574296 19574326 -126014962 - L1PA4 LINE L1 -1206 4949 4920 291 288 247 7 chr10 19574338 19574484 -126014804 + MIR SINE MIR 82 262 0 1048 166 0 33 chr10 19574525 19574706 -126014582 - AluJo SINE Alu -137 175 1 200 274 20 0 chr10 19574829 19574880 -126014408 - L2 LINE L2 0 3313 3262 479 335 138 5 chr10 19574992 19575216 -126014072 - MIR SINE MIR -1 261 8 897 142 0 35 chr10 19576036 19576177 -126013111 + AluJo SINE Alu 1 136 -176 214 300 3 35 chr10 19576386 19576471 -126012817 - MIR3 SINE MIR -53 155 92 1287 133 36 0 chr10 19576618 19576814 -126012474 + AluJo SINE Alu 93 295 -17 4630 112 14 26 chr10 19577502 19578060 -126011228 + L1MA2 LINE L1 5561 6109 -195 2726 114 57 71 chr10 19578060 19578553 -126010735 - LTR19A LTR ERV1 0 486 1 4630 112 14 26 chr10 19578553 19578725 -126010563 + L1MA2 LINE L1 6109 6282 -22 1591 219 49 0 chr10 19578969 19579294 -126009994 - MER58B DNA MER1_type 0 341 1 1675 170 31 7 chr10 19580057 19580345 -126008943 + AluJo SINE Alu 1 295 -17 195 271 86 0 chr10 19580492 19580562 -126008726 - L2 LINE L2 -12 3301 3226 1575 142 8 132 chr10 19580732 19580793 -126008495 - L1MB3 LINE L1 -1 6182 6115 2060 132 6 6 chr10 19580793 19581104 -126008184 - AluSx SINE Alu -1 311 1 1575 142 8 132 chr10 19581104 19581296 -126007992 - L1MB3 LINE L1 -68 6115 5989 1794 174 0 4 chr10 19581296 19581577 -126007711 - AluJb SINE Alu -32 280 1 1575 142 8 132 chr10 19581577 19581702 -126007586 - L1MB3 LINE L1 -194 5989 5850 2296 114 0 0 chr10 19582038 19582346 -126006942 - AluSx SINE Alu -4 308 1 405 96 0 0 chr10 19582819 19582871 -126006417 + Alu SINE Alu 2 53 -258 379 191 191 22 chr10 19582885 19582974 -126006314 + L1ME LINE L1 5523 5626 -544 2227 94 3 3 chr10 19583000 19583298 -126005990 + AluSg SINE Alu 1 298 -12 4641 77 7 0 chr10 19583971 19584554 -126004734 - L1PA10 LINE L1 -3 6165 5579 450 277 98 36 chr10 19584835 19585059 -126004229 - L2 LINE L2 -526 2788 2551 463 256 91 35 chr10 19585099 19585298 -126003990 - L2 LINE L2 -29 3284 3075 2213 121 0 0 chr10 19585304 19585594 -126003694 - AluSx SINE Alu -22 290 1 1763 177 3 16 chr10 19586032 19586348 -126002940 + AluJb SINE Alu 1 312 0 466 227 43 64 chr10 19586524 19586587 -126002701 - MER5B DNA MER1_type -2 176 113 2113 111 17 10 chr10 19586587 19586884 -126002404 + AluSx SINE Alu 1 299 -13 466 227 43 64 chr10 19586884 19586961 -126002327 - MER5B DNA MER1_type -65 113 39 1204 95 0 85 chr10 19587062 19587251 -126002037 + AluSp SINE Alu 129 301 -12 627 277 99 52 chr10 19587329 19587903 -126001385 - L1MC4a LINE L1 -1923 5885 5261 2440 62 0 13 chr10 19587989 19588295 -126000993 - AluY SINE Alu -9 302 1 201 292 77 15 chr10 19588384 19588449 -126000839 + L2 LINE L2 3154 3222 -50 186 337 117 18 chr10 19588696 19588859 -126000429 + L2 LINE L2 2880 3058 -214 235 165 94 59 chr10 19589011 19589096 -126000192 - L2 LINE L2 -37 3276 3189 1145 208 0 0 chr10 19589338 19589554 -125999734 - AluJb SINE Alu -4 308 93 831 167 0 0 chr10 19589677 19589803 -125999485 - FLAM_C SINE Alu -17 126 1 1835 152 7 10 chr10 19590889 19591185 -125998103 - AluJo SINE Alu -17 295 1 268 217 101 39 chr10 19591599 19591728 -125997560 - L1M LINE L1 -2406 5402 5266 2188 103 0 3 chr10 19591966 19592258 -125997030 - AluSg SINE Alu -19 291 1 258 314 38 38 chr10 19592606 19592711 -125996577 - MIR SINE MIR -63 145 41 759 280 123 68 chr10 19593201 19593391 -125995897 - L2 LINE L2 0 3313 3135 2100 135 7 3 chr10 19593391 19593695 -125995593 + AluJb SINE Alu 1 305 -7 759 280 123 68 chr10 19593695 19593975 -125995313 - L2 LINE L2 -178 3135 2817 * 1389 261 55 17 chr10 19593955 19594414 -125994874 - L2 LINE L2 -1197 2117 1642 2102 116 39 0 chr10 19594673 19594958 -125994330 + AluSq SINE Alu 1 296 -17 1882 117 7 58 chr10 19595693 19596002 -125993286 - AluSg SINE Alu -17 293 1 369 245 252 7 chr10 19596367 19596514 -125992774 + MIR SINE MIR 80 262 0 206 105 26 0 chr10 19596840 19596878 -125992410 + GA-rich Low_complexity Low_complexity 2 40 0 439 315 113 70 chr10 19596925 19597325 -125991963 + L2 LINE L2 2876 3292 -21 2051 133 0 0 chr10 19597703 19597997 -125991291 - AluSx SINE Alu -12 300 7 2262 95 3 0 chr10 19598234 19598517 -125990771 - AluSx SINE Alu -28 284 1 1615 125 9 0 chr10 19598931 19599155 -125990133 + AluSx SINE Alu 1 226 -86 734 146 0 31 chr10 19599255 19599385 -125989903 - FRAM SINE Alu -21 155 30 804 127 475 12 chr10 19599387 19599646 -125989642 + LTR29 LTR ERV1 46 424 -198 784 181 58 6 chr10 19599640 19599811 -125989477 + LTR49 LTR ERV1 416 595 0 * 2583 143 46 22 chr10 19600070 19600093 -125989195 + MER4C LTR ERV1 1 22 -443 2043 127 10 0 chr10 19600093 19600392 -125988896 + AluSq SINE Alu 1 302 -11 2583 143 46 22 chr10 19600392 19600822 -125988466 + MER4C LTR ERV1 22 465 0 3814 136 20 36 chr10 19600862 19601114 -125988174 + MER41B LTR ERV1 1 255 -380 4123 116 14 31 chr10 19601114 19601291 -125987997 + MER51A LTR ERV1 1 179 -455 1970 152 0 23 chr10 19601291 19601594 -125987694 - AluSx SINE Alu -16 296 1 4123 116 14 31 chr10 19601594 19602061 -125987227 + MER51A LTR ERV1 179 634 0 3814 136 20 36 chr10 19602061 19602453 -125986835 + MER41B LTR ERV1 255 635 0 227 289 13 0 chr10 19602518 19602594 -125986694 + MIR SINE MIR 168 244 -18 2737 244 63 30 chr10 19602805 19603615 -125985673 + MER21B LTR ERV1 12 848 -15 414 144 5 0 chr10 19603907 19603980 -125985308 + MER4C LTR ERV1 389 452 -13 318 324 88 0 chr10 19604281 19604429 -125984859 - MIR3 SINE MIR -19 189 29 185 296 28 78 chr10 19605353 19605495 -125983793 + MER5B DNA MER1_type 1 135 -43 2465 96 0 0 chr10 19605788 19606100 -125983188 + AluSx SINE Alu 1 312 0 2332 98 0 3 chr10 19607000 19607305 -125981983 - AluSq SINE Alu -9 304 1 268 222 65 9 chr10 19607757 19607865 -125981423 + (TATAG)n Simple_repeat Simple_repeat 2 115 0 * 312 136 57 62 chr10 19607846 19608022 -125981266 + (TA)n Simple_repeat Simple_repeat 2 176 0 635 150 0 0 chr10 19608022 19608122 -125981166 - AluS SINE Alu -211 101 2 21 0 0 0 chr10 19608216 19608237 -125981051 + AT_rich Low_complexity Low_complexity 1 21 0 226 250 0 0 chr10 19608642 19608694 -125980594 + MIR3 SINE MIR 103 154 -54 1262 153 59 21 chr10 19609309 19609545 -125979743 - AluJo SINE Alu -11 301 57 26 0 0 0 chr10 19609545 19609571 -125979717 + AT_rich Low_complexity Low_complexity 1 26 0 2069 132 4 0 chr10 19609669 19609979 -125979309 + AluSp SINE Alu 1 311 0 1715 176 29 10 chr10 19610084 19610390 -125978898 - AluJb SINE Alu 0 312 1 2018 119 7 0 chr10 19611416 19611693 -125977595 - AluSx SINE Alu -33 279 1 1464 155 40 16 chr10 19612073 19612325 -125976963 + AluJo SINE Alu 39 296 -16 2103 132 3 0 chr10 19612586 19612890 -125976398 + AluSx SINE Alu 1 305 -7 258 300 105 32 chr10 19613099 19613221 -125976067 + L2 LINE L2 2149 2261 -1053 2203 128 0 0 chr10 19613221 19613519 -125975769 - AluSx SINE Alu -14 298 1 258 300 105 32 chr10 19613519 19613643 -125975645 + L2 LINE L2 2261 2413 -901 199 255 99 45 chr10 19613848 19614116 -125975172 - L2 LINE L2 -696 2618 2259 994 149 52 17 chr10 19614123 19614297 -125974991 - AluJ SINE Alu 0 312 133 514 309 105 41 chr10 19614424 19614836 -125974452 - L2 LINE L2 -1275 2039 1655 1386 179 12 86 chr10 19614836 19615160 -125974128 + AluJb SINE Alu 1 300 -12 514 309 105 41 chr10 19615160 19615194 -125974094 - L2 LINE L2 -1659 1655 1625 881 137 0 15 chr10 19615194 19615325 -125973963 - AluJ SINE Alu -173 129 1 514 309 105 41 chr10 19615325 19615505 -125973783 - L2 LINE L2 -1689 1625 1372 2362 110 0 0 chr10 19615510 19615820 -125973468 + AluSg SINE Alu 1 310 0 1909 147 3 7 chr10 19616012 19616297 -125972991 + AluJo SINE Alu 1 284 -28 198 0 0 0 chr10 19616780 19616802 -125972486 + (A)n Simple_repeat Simple_repeat 1 22 0 1252 119 45 15 chr10 19616868 19617070 -125972218 + MER1B DNA MER1_type 132 339 0 1941 123 55 0 chr10 19617353 19617646 -125971642 + AluSp SINE Alu 1 309 -4 1858 169 10 0 chr10 19617662 19617958 -125971330 - AluJb SINE Alu -13 299 1 210 256 0 0 chr10 19618450 19618493 -125970795 + (TATG)n Simple_repeat Simple_repeat 2 44 0 2067 124 31 0 chr10 19618551 19618842 -125970446 - AluSx SINE Alu -12 300 1 2307 103 3 0 chr10 19619502 19619803 -125969485 + AluSx SINE Alu 1 302 -10 266 313 62 18 chr10 19620052 19620164 -125969124 - L2 LINE L2 0 3313 3197 455 313 120 6 chr10 19620429 19620719 -125968569 + L2 LINE L2 2732 3053 -260 1254 186 115 0 chr10 19620727 19620980 -125968308 - AluJo SINE Alu -30 282 1 1483 214 33 52 chr10 19621037 19621401 -125967887 + MLT1A1 LTR MaLR 1 357 -8 263 299 104 7 chr10 19621404 19621558 -125967730 + L2 LINE L2 3115 3283 -30 250 336 100 0 chr10 19621588 19621698 -125967590 + L3 LINE CR1 430 550 -1027 658 266 76 55 chr10 19621839 19622366 -125966922 + MER34 LTR ERV1 1 538 -4 193 283 100 30 chr10 19622506 19622700 -125966588 + L3 LINE CR1 1151 1399 -178 2371 74 0 37 chr10 19623039 19623362 -125965926 + AluY SINE Alu 1 311 0 437 250 81 7 chr10 19623669 19623805 -125965483 + MLT1J2 LTR MaLR 1 146 -304 2359 104 3 0 chr10 19624297 19624605 -125964683 - AluSp SINE Alu -4 309 1 1517 198 14 4 chr10 19624824 19625102 -125964186 + AluJo SINE Alu 1 281 -31 332 203 0 0 chr10 19625125 19625184 -125964104 + L1MB3 LINE L1 5671 5729 -442 1735 151 14 7 chr10 19625268 19625560 -125963728 + L1MB3 LINE L1 5704 5997 -186 1116 106 65 0 chr10 19625564 19625734 -125963554 + MSTA LTR MaLR 1 181 -247 1929 141 28 3 chr10 19625734 19626025 -125963263 - AluSx SINE Alu -14 298 1 1608 153 21 24 chr10 19627158 19627446 -125961842 - AluJo SINE Alu -14 298 12 806 178 32 81 chr10 19627639 19627886 -125961402 + MER106A DNA MER1_type 2 236 0 215 350 40 0 chr10 19628137 19628237 -125961051 - L2 LINE L2 -1 3271 3168 1976 128 0 17 chr10 19628279 19628575 -125960713 + AluSx SINE Alu 1 291 -21 369 293 171 43 chr10 19628733 19629225 -125960063 - L2 LINE L2 -337 2977 2423 801 204 0 7 chr10 19629505 19629657 -125959631 + FRAM SINE Alu 1 151 -25 1390 218 3 17 chr10 19629783 19630072 -125959216 - AluJo SINE Alu -27 285 1 2113 107 12 47 chr10 19631277 19631596 -125957692 + AluSx SINE Alu 1 308 -4 340 264 182 0 chr10 19632519 19632640 -125956648 + MIR SINE MIR 41 183 -79 2511 50 10 3 chr10 19632809 19633109 -125956179 - AluY SINE Alu -7 304 3 674 242 6 0 chr10 19633514 19633671 -125955617 + MER5A DNA MER1_type 5 162 -27 2009 115 46 26 chr10 19633707 19634012 -125955276 - AluSq SINE Alu -2 311 1 878 194 6 18 chr10 19634059 19634224 -125955064 + FRAM SINE Alu 2 164 -2 891 200 0 18 chr10 19634548 19634713 -125954575 - FRAM SINE Alu -4 162 1 2094 129 0 23 chr10 19634737 19635046 -125954242 + AluSc SINE Alu 1 302 -7 1630 149 11 39 chr10 19635685 19635967 -125953321 + AluJo SINE Alu 1 274 -38 411 21 0 0 chr10 19635970 19636018 -125953270 + (CA)n Simple_repeat Simple_repeat 1 48 0 215 182 45 0 chr10 19636818 19636862 -125952426 + GA-rich Low_complexity Low_complexity 4 49 0 774 157 0 0 chr10 19636864 19636985 -125952303 - FLAM_C SINE Alu -22 121 1 1859 89 25 29 chr10 19641144 19641424 -125947864 + L1MA1 LINE L1 6017 6295 -7 28 48 0 0 chr10 19641424 19641466 -125947822 + AT_rich Low_complexity Low_complexity 1 42 0 1333 183 45 32 chr10 19642410 19642853 -125946435 - L1MB8 LINE L1 -6 6172 5597 1853 139 22 0 chr10 19642977 19643251 -125946037 + AluSx SINE Alu 1 280 -32 243 0 0 0 chr10 19643253 19643280 -125946008 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3251 132 33 4 chr10 19643640 19644119 -125945169 + MER1A DNA MER1_type 37 529 0 686 262 185 22 chr10 19644287 19644412 -125944876 - HAL1 LINE L1 -866 1641 1538 2126 135 3 0 chr10 19644412 19644723 -125944565 - AluSx SINE Alu 0 312 1 686 262 185 22 chr10 19644723 19645277 -125944011 - HAL1 LINE L1 -969 1538 851 2272 130 0 0 chr10 19645533 19645840 -125943448 - AluSx SINE Alu -5 307 1 1068 168 25 29 chr10 19646151 19646340 -125942948 - AluJo SINE Alu -10 302 113 1614 138 22 11 chr10 19646340 19646615 -125942673 + AluSq SINE Alu 24 301 -12 1068 168 25 29 chr10 19646615 19646663 -125942625 - AluJo SINE Alu -199 113 66 234 152 0 43 chr10 19646787 19646833 -125942455 - Alu SINE Alu -189 113 70 1755 194 3 13 chr10 19647298 19647613 -125941675 + AluJo SINE Alu 1 312 0 631 218 56 22 chr10 19647881 19648060 -125941228 - L1MB2 LINE L1 -36 6135 5951 451 206 21 0 chr10 19648057 19648154 -125941134 - L1MA4A LINE L1 -23 6280 6182 * 1306 158 65 1 chr10 19648162 19648525 -125940763 - L1MB1 LINE L1 -131 6052 5702 1808 140 19 0 chr10 19648527 19648792 -125940496 - AluSx SINE Alu -7 305 36 354 285 57 0 chr10 19648943 19649066 -125940222 - MIR SINE MIR -97 165 36 216 353 143 12 chr10 19649534 19649877 -125939411 + L2 LINE L2 1956 2343 -971 1818 168 20 3 chr10 19650047 19650350 -125938938 - AluJo SINE Alu -4 308 1 376 181 76 29 chr10 19650367 19650472 -125938816 - MER103 DNA DNA -2 164 55 2172 123 0 3 chr10 19651088 19651381 -125937907 - AluSx SINE Alu -20 292 1 533 289 26 68 chr10 19652448 19652714 -125936574 + MIR SINE MIR 3 257 -5 311 243 0 27 chr10 19652736 19652810 -125936478 - MIR SINE MIR -155 107 36 1109 159 10 5 chr10 19652839 19653046 -125936242 - MLT1A1 LTR MaLR -157 208 1 2177 138 0 0 chr10 19653118 19653416 -125935872 + AluSx SINE Alu 1 298 -14 936 84 0 0 chr10 19654092 19654223 -125935065 + (TA)n Simple_repeat Simple_repeat 1 131 0 2280 106 0 0 chr10 19654286 19654588 -125934700 - AluSc SINE Alu -7 302 1 2411 67 3 3 chr10 19654683 19654980 -125934308 + AluSq SINE Alu 1 297 -16 1716 169 54 10 chr10 19655212 19655508 -125933780 + AluJb SINE Alu 1 309 -3 2180 113 13 3 chr10 19656085 19656385 -125932903 + AluSg SINE Alu 1 303 -7 329 342 86 7 chr10 19657033 19657185 -125932103 - MIR SINE MIR -52 210 47 2149 135 0 3 chr10 19657597 19657900 -125931388 + AluSq SINE Alu 1 302 -11 180 334 122 29 chr10 19658087 19658473 -125930815 - L2 LINE L2 -1161 2153 1732 235 254 108 87 chr10 19658610 19658898 -125930390 + MLT1H LTR MaLR 114 407 -142 2256 106 3 0 chr10 19659061 19659362 -125929926 + AluSx SINE Alu 1 302 -10 2059 109 0 0 chr10 19659863 19660137 -125929151 - AluSx SINE Alu -4 308 35 1761 103 0 0 chr10 19660568 19660827 -125928461 - AluSc SINE Alu 0 308 50 2261 109 0 0 chr10 19660938 19661260 -125928028 + MER57B LTR ERV1 1 322 -112 923 262 91 80 chr10 19662110 19662648 -125926640 - MER41C LTR ERV1 -9 545 2 971 163 43 59 chr10 19662764 19662810 -125926478 - MLT2B1 LTR ERVL 0 520 475 204 40 0 0 chr10 19662810 19662835 -125926453 + (CA)n Simple_repeat Simple_repeat 2 26 0 189 0 0 0 chr10 19662834 19662855 -125926433 + (GA)n Simple_repeat Simple_repeat 2 22 0 * 971 163 43 59 chr10 19662835 19663248 -125926040 - MLT2B1 LTR ERVL -45 475 1 26 0 0 0 chr10 19663369 19663395 -125925893 + AT_rich Low_complexity Low_complexity 1 26 0 2256 121 0 6 chr10 19663788 19664103 -125925185 - AluSp SINE Alu 0 313 1 2019 125 7 20 chr10 19665206 19665501 -125923787 - AluSq SINE Alu -22 291 1 24 32 0 0 chr10 19666487 19666518 -125922770 + AT_rich Low_complexity Low_complexity 1 31 0 1701 204 64 9 chr10 19666638 19667074 -125922214 - MER66B LTR ERV1 0 486 27 552 279 126 10 chr10 19667189 19667587 -125921701 - L1ME3A LINE L1 -217 5936 5493 563 283 111 78 chr10 19667598 19667886 -125921402 - L1ME3A LINE L1 -748 5381 5104 1381 229 0 14 chr10 19667886 19668202 -125921086 + AluJo SINE Alu 1 312 0 563 283 111 78 chr10 19668202 19669059 -125920229 - L1ME3A LINE L1 -1025 5104 4277 701 210 0 0 chr10 19669059 19669183 -125920105 + FLAM_C SINE Alu 1 124 -9 563 283 111 78 chr10 19669183 19669457 -125919831 - L1ME3A LINE L1 -1852 4277 4013 1928 84 4 0 chr10 19669457 19669708 -125919580 - AluSp SINE Alu -13 300 49 563 283 111 78 chr10 19669708 19670323 -125918965 - L1ME3A LINE L1 -2116 4013 3278 308 255 36 31 chr10 19670489 19670681 -125918607 - L1ME3A LINE L1 -3139 2990 2798 2166 119 10 0 chr10 19670906 19671208 -125918080 + AluSx SINE Alu 1 305 -7 21 0 0 0 chr10 19671214 19671235 -125918053 + AT_rich Low_complexity Low_complexity 1 21 0 350 314 46 17 chr10 19671643 19671968 -125917320 - L1MEd LINE L1 -4762 1548 1173 927 126 0 15 chr10 19672046 19672181 -125917107 + FLAM_C SINE Alu 1 133 0 1613 158 10 38 chr10 19672208 19672499 -125916789 + AluJo SINE Alu 19 301 -11 1088 169 5 30 chr10 19672932 19673133 -125916155 + AluJb SINE Alu 89 284 -28 1609 177 10 30 chr10 19673483 19673782 -125915506 - AluJo SINE Alu -19 293 1 2208 133 0 0 chr10 19674264 19674564 -125914724 - AluSg SINE Alu -10 300 1 321 47 0 0 chr10 19674940 19674983 -125914305 + (TG)n Simple_repeat Simple_repeat 2 44 0 1641 167 11 11 chr10 19675052 19675368 -125913920 + AluJb SINE Alu 1 316 0 210 174 0 0 chr10 19675600 19675646 -125913642 + (TA)n Simple_repeat Simple_repeat 2 47 0 181 367 51 10 chr10 19675717 19675815 -125913473 - L2 LINE L2 -343 2971 2870 363 117 17 0 chr10 19676184 19676244 -125913044 - HY1 scRNA scRNA -5 107 47 369 0 0 0 chr10 19676375 19676416 -125912872 + (TTG)n Simple_repeat Simple_repeat 2 42 0 248 247 14 27 chr10 19676757 19676830 -125912458 - LTR33A LTR ERVL -8 515 444 257 192 0 0 chr10 19677005 19677057 -125912231 - Charlie1 DNA MER1_type -1 2760 2709 929 164 0 0 chr10 19677068 19677202 -125912086 - AluJo SINE Alu -178 134 1 308 247 0 0 chr10 19677206 19677283 -125912005 - Charlie1 DNA MER1_type -45 2716 2640 954 246 0 9 chr10 19677299 19677523 -125911765 - Charlie1 DNA MER1_type -2539 222 1 1952 149 0 3 chr10 19678011 19678300 -125910988 - AluJb SINE Alu -24 288 1 367 243 84 9 chr10 19679818 19679925 -125909363 - Tigger2 DNA MER2_type 0 2718 2604 331 221 0 0 chr10 19779927 19780004 -125809284 + AluSp/q SINE Alu 226 302 -1 1686 176 3 3 chr10 19780228 19780530 -125808758 + AluSx SINE Alu 1 302 -10 519 270 16 8 chr10 19780886 19781012 -125808276 - MER5A DNA MER1_type -4 185 59 3799 196 40 19 chr10 19781112 19782157 -125807131 - L1MB3 LINE L1 -67 6116 5046 1939 155 94 13 chr10 19782993 19783387 -125805901 + MSTA LTR MaLR 3 428 0 1148 221 10 31 chr10 19784170 19784459 -125804829 + AluSg SINE Alu 1 283 -17 718 164 0 31 chr10 19784876 19785004 -125804284 + FLAM_C SINE Alu 3 126 -7 21 57 0 0 chr10 19786270 19786305 -125802983 + AT_rich Low_complexity Low_complexity 1 35 0 1935 106 0 87 chr10 19786456 19786534 -125802754 + Tigger3(Golem) DNA MER2_type 2702 2785 -243 1747 146 71 10 chr10 19786534 19786828 -125802460 - AluSx SINE Alu 0 312 1 1935 106 0 87 chr10 19786828 19786842 -125802446 + Tigger3(Golem) DNA MER2_type 2785 2799 -229 2278 97 0 23 chr10 19786842 19787152 -125802136 - AluSg SINE Alu -7 303 1 1935 106 0 87 chr10 19787152 19787416 -125801872 + Tigger3(Golem) DNA MER2_type 2799 3028 0 741 263 30 26 chr10 19787450 19787682 -125801606 - MSTD LTR MaLR 0 396 164 1191 149 0 6 chr10 19787683 19787857 -125801431 + AluSx SINE Alu 2 174 -138 371 195 12 0 chr10 19787964 19788046 -125801242 + Tigger4(Zombi) DNA MER2_type 2608 2690 -41 1327 211 78 24 chr10 19788059 19788433 -125800855 - L1MB7 LINE L1 -291 5893 5500 26 0 0 0 chr10 19788436 19788462 -125800826 + AT_rich Low_complexity Low_complexity 1 26 0 1966 128 0 30 chr10 19788464 19788760 -125800528 + AluSx SINE Alu 1 287 -25 1987 119 42 0 chr10 19789123 19789409 -125799879 + AluSg SINE Alu 1 298 -12 27 29 0 0 chr10 19789582 19789616 -125799672 + AT_rich Low_complexity Low_complexity 1 34 0 1290 141 5 14 chr10 19790148 19790361 -125798927 - AluJb SINE Alu -16 296 86 305 346 98 8 chr10 19791367 19791500 -125797788 - MIR3 SINE MIR -36 172 28 2013 153 0 13 chr10 19791751 19792064 -125797224 + AluSx SINE Alu 1 309 -3 1055 257 22 4 chr10 19792834 19793060 -125796228 + MIR SINE MIR 23 252 -10 1242 109 0 6 chr10 19793145 19793320 -125795968 - AluSg/x SINE Alu -2 308 135 1341 150 85 65 chr10 19793925 19794218 -125795070 - AluJo SINE Alu -3 299 1 773 137 12 12 chr10 19794824 19794985 -125794303 + CT-rich Low_complexity Low_complexity 4 164 0 6931 41 3 0 chr10 19795091 19795943 -125793345 + L1PA4 LINE L1 5298 6152 -3 979 116 0 12 chr10 19795960 19796124 -125793164 + L1MA1 LINE L1 6141 6302 0 1041 233 105 102 chr10 19796141 19797132 -125792156 + MER31-int LTR ERV1 1377 2370 -2566 453 203 0 0 chr10 19797158 19797237 -125792051 - FRAM/FAM SINE Alu -98 78 1 1631 160 7 14 chr10 19797558 19797833 -125791455 - AluJb SINE Alu -13 299 27 1540 89 0 246 chr10 19797936 19798331 -125790957 - AluSq SINE Alu -15 298 1 2171 184 20 13 chr10 19798351 19798856 -125790432 - L1MC/D LINE L1 -633 5700 5185 1961 160 7 0 chr10 19798878 19799172 -125790116 - AluSx SINE Alu -16 296 1 694 201 0 30 chr10 19799203 19799337 -125789951 + FLAM_C SINE Alu 2 131 -12 300 91 0 0 chr10 19799403 19799447 -125789841 + (TG)n Simple_repeat Simple_repeat 1 44 0 2149 242 136 36 chr10 19799500 19800463 -125788825 - L1MC4a LINE L1 0 7808 6750 207 333 0 0 chr10 19800479 19800545 -125788743 + (TATATG)n Simple_repeat Simple_repeat 4 69 0 414 200 0 0 chr10 19800556 19800636 -125788652 - Tigger7 DNA MER2_type -7 2580 2501 378 222 0 48 chr10 19800653 19800842 -125788446 + (TA)n Simple_repeat Simple_repeat 1 180 0 323 201 14 42 chr10 19800895 19801039 -125788249 - Tigger7 DNA MER2_type -82 2505 2366 679 249 111 82 chr10 19801320 19801755 -125787533 + HAL1b LINE L1 352 806 -542 861 160 0 0 chr10 19801755 19801886 -125787402 + FLAM_C SINE Alu 1 131 -2 679 249 111 82 chr10 19801886 19801984 -125787304 + HAL1b LINE L1 806 900 -448 2183 110 10 7 chr10 19801988 19802288 -125787000 + AluSg SINE Alu 1 301 -9 264 198 0 62 chr10 19802454 19802477 -125786811 + CT-rich Low_complexity Low_complexity 3 26 -52 2101 119 0 0 chr10 19802477 19802755 -125786533 - AluSx SINE Alu -34 278 1 264 198 0 62 chr10 19802755 19802812 -125786476 + CT-rich Low_complexity Low_complexity 26 78 0 26 0 0 0 chr10 19803274 19803300 -125785988 + AT_rich Low_complexity Low_complexity 1 26 0 433 228 13 0 chr10 19804183 19804262 -125785026 + Tigger3b DNA MER2_type 1 80 -1151 1979 110 0 0 chr10 19804263 19804527 -125784761 + AluSq SINE Alu 1 264 -49 511 108 0 0 chr10 19804540 19804614 -125784674 + Alu SINE Alu 238 311 -1 3900 143 62 16 chr10 19804630 19805130 -125784158 + Tigger3b DNA MER2_type 65 610 -2418 1846 138 19 44 chr10 19805130 19805449 -125783839 + AluSx SINE Alu 1 311 -1 3900 143 62 16 chr10 19805449 19805680 -125783608 + Tigger3b DNA MER2_type 610 829 -402 502 260 130 0 chr10 19806292 19806492 -125782796 - MLT1J2 LTR MaLR -209 241 16 1180 259 65 24 chr10 19806493 19806829 -125782459 - L1ME1 LINE L1 -25 6141 5792 1879 219 43 36 chr10 19806829 19807196 -125782092 + L1ME LINE L1 5094 5454 -712 1772 102 4 20 chr10 19807196 19807450 -125781838 - AluSq SINE Alu -9 304 55 1879 219 43 36 chr10 19807450 19807772 -125781516 + L1ME LINE L1 5454 5772 -394 6237 119 28 6 chr10 19809941 19810913 -125778375 - L1PA15 LINE L1 0 6165 5162 231 36 0 0 chr10 19810913 19810941 -125778347 + (TTG)n Simple_repeat Simple_repeat 3 30 0 6237 119 28 6 chr10 19810941 19811000 -125778288 - L1PA15 LINE L1 -1003 5162 5106 653 176 0 19 chr10 19811745 19811853 -125777435 + AluJo/FLAM SINE Alu 16 121 -191 2084 139 3 0 chr10 19811853 19812147 -125777141 - AluSx SINE Alu -17 295 1 23 33 0 0 chr10 19812148 19812178 -125777110 + AT_rich Low_complexity Low_complexity 1 30 0 301 265 128 0 chr10 19813199 19813301 -125775987 + L1MC4 LINE L1 6591 6705 -1337 1705 185 0 20 chr10 19814450 19814753 -125774535 + AluJb SINE Alu 1 297 -15 2161 115 10 0 chr10 19815477 19815773 -125773515 + AluSq SINE Alu 1 299 -14 335 83 0 21 chr10 19815938 19815986 -125773302 + AluSp SINE Alu 1 47 -255 22 0 0 0 chr10 19816323 19816345 -125772943 + AT_rich Low_complexity Low_complexity 1 22 0 1967 116 30 30 chr10 19816513 19816814 -125772474 + AluSg SINE Alu 1 301 -9 353 85 0 0 chr10 19817441 19817488 -125771800 - MADE1 DNA Mariner 0 80 34 1863 100 35 4 chr10 19817488 19817747 -125771541 + AluSp SINE Alu 34 300 -13 1909 153 33 3 chr10 19817854 19818154 -125771134 + AluJb SINE Alu 1 309 -3 249 304 71 77 chr10 19818470 19818638 -125770650 + MIR SINE MIR 3 169 -93 23 33 0 0 chr10 19818820 19818850 -125770438 + AT_rich Low_complexity Low_complexity 1 30 0 1714 153 29 73 chr10 19819670 19819872 -125769416 - MER2 DNA MER2_type -16 329 147 2018 114 47 3 chr10 19819872 19820170 -125769118 + AluSq SINE Alu 1 311 -2 1714 153 29 73 chr10 19820170 19820308 -125768980 - MER2 DNA MER2_type -198 147 4 2098 136 3 3 chr10 19821127 19821428 -125767860 - AluSx SINE Alu -11 301 1 1022 236 124 4 chr10 19821431 19821706 -125767582 + MLT1B LTR MaLR 83 390 0 958 134 0 0 chr10 19821985 19822119 -125767169 + AluSg/x SINE Alu 155 288 -24 1269 142 13 36 chr10 19822129 19822462 -125766826 + LTR54 LTR ERV1 96 481 -29 2039 131 0 0 chr10 19822462 19822760 -125766528 + AluY SINE Alu 1 298 -13 1269 142 13 36 chr10 19822760 19822790 -125766498 + LTR54 LTR ERV1 481 510 0 963 258 38 30 chr10 19822804 19823071 -125766217 + MER31-int LTR ERV1 1916 2184 -4147 664 92 0 0 chr10 19823297 19823384 -125765904 + AluSg/x SINE Alu 214 300 -9 1982 125 46 0 chr10 19823636 19823917 -125765371 + AluSg SINE Alu 1 294 -16 286 297 0 27 chr10 19823929 19824003 -125765285 + MER31-int LTR ERV1 3124 3195 -4342 251 333 51 92 chr10 19824002 19824197 -125765091 + MER31-int LTR ERV1 2355 2541 -3790 * 656 222 5 69 chr10 19824298 19824514 -125764774 + MER31-int LTR ERV1 648 849 -6688 308 218 35 46 chr10 19824589 19824666 -125764622 + MER31-int LTR ERV1 2827 2904 -3359 2419 109 0 0 chr10 19824666 19824978 -125764310 + AluSx SINE Alu 1 312 0 418 104 59 32 chr10 19824980 19825073 -125764215 + MER31-int LTR ERV1 1290 1379 -3557 610 108 81 0 chr10 19825074 19825185 -125764103 + L1MA1 LINE L1 6009 6128 -174 * 5288 41 2 0 chr10 19825182 19825822 -125763466 + L1P LINE L1 4576 5216 -930 1105 123 0 22 chr10 19826079 19826258 -125763030 + AluSg/x SINE Alu 135 309 -1 1003 264 22 4 chr10 19826339 19826566 -125762722 - MIR SINE MIR -10 252 22 249 33 0 0 chr10 19827402 19827432 -125761856 + (CA)n Simple_repeat Simple_repeat 2 31 0 338 311 19 0 chr10 19828053 19828156 -125761132 + MIR SINE MIR 127 231 -31 2571 120 92 5 chr10 19828174 19828566 -125760722 - MSTA LTR MaLR 0 428 3 332 325 42 78 chr10 19829651 19830060 -125759228 + L2 LINE L2 2863 3256 -16 1949 158 191 8 chr10 19831238 19831600 -125757688 - MSTA LTR MaLR 0 428 1 2190 128 3 0 chr10 19832270 19832576 -125756712 - AluSx SINE Alu -5 307 1 2056 241 54 56 chr10 19832724 19833318 -125755970 - MLT1E LTR MaLR 0 593 1 2102 113 26 19 chr10 19833569 19833878 -125755410 + AluSx SINE Alu 1 311 -1 823 298 51 28 chr10 19834133 19834522 -125754766 - MLT1I LTR MaLR -8 401 4 2353 46 0 7 chr10 19834563 19834871 -125754417 + AluY SINE Alu 1 306 0 2270 100 3 25 chr10 19834969 19835288 -125754000 + AluSx SINE Alu 1 312 0 238 268 306 0 chr10 19835335 19835492 -125753796 + L2 LINE L2 3037 3241 -72 533 186 207 7 chr10 19836156 19836296 -125752992 + MSTD LTR MaLR 10 177 -219 667 154 9 0 chr10 19836310 19836420 -125752868 - Alu SINE Alu 0 310 200 22 0 0 0 chr10 19837166 19837188 -125752100 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr10 19838003 19838024 -125751264 + AT_rich Low_complexity Low_complexity 1 21 0 228 35 0 0 chr10 19838024 19838053 -125751235 + (CA)n Simple_repeat Simple_repeat 2 30 0 1627 133 117 0 chr10 19838055 19838311 -125750977 - AluSq SINE Alu -27 286 1 2130 114 3 3 chr10 19839080 19839378 -125749910 - AluSg SINE Alu -12 298 1 30 0 0 0 chr10 19839417 19839447 -125749841 + AT_rich Low_complexity Low_complexity 1 30 0 35 0 0 0 chr10 19839671 19839706 -125749582 + AT_rich Low_complexity Low_complexity 1 35 0 2195 95 0 13 chr10 19840020 19840325 -125748963 + AluY SINE Alu 1 301 -10 1953 125 10 20 chr10 19840639 19840942 -125748346 + AluSx SINE Alu 1 300 -12 1475 170 82 0 chr10 19841495 19841777 -125747511 - AluSx SINE Alu -2 310 6 186 103 0 0 chr10 19841946 19841975 -125747313 + (TCC)n Simple_repeat Simple_repeat 2 30 0 1191 193 83 15 chr10 19842001 19842266 -125747022 - AluJo SINE Alu -19 283 1 1359 130 5 14 chr10 19842914 19843129 -125746159 + AluJb SINE Alu 86 298 -14 190 154 77 0 chr10 19843582 19843621 -125745667 - MIR SINE MIR -4 258 217 252 271 151 60 chr10 19844091 19844257 -125745031 + MIR SINE MIR 69 249 -13 1974 125 42 0 chr10 19846055 19846344 -125742944 - AluSx SINE Alu -11 301 1 237 290 240 0 chr10 19846650 19846750 -125742538 + L2 LINE L2 3190 3313 0 2240 104 0 3 chr10 19846861 19847158 -125742130 - AluSx SINE Alu -16 296 1 467 214 73 90 chr10 19847350 19847584 -125741704 + MER106A DNA MER1_type 7 236 0 1127 92 0 0 chr10 19847605 19847747 -125741541 - AluSx SINE Alu -36 274 133 1979 126 30 7 chr10 19848086 19848387 -125740901 + AluSg SINE Alu 1 308 -2 431 333 154 0 chr10 19848760 19848961 -125740327 + MIR SINE MIR 31 262 0 855 131 25 0 chr10 19849845 19849967 -125739321 - AluSx SINE Alu -188 125 1 195 100 0 0 chr10 19850130 19850160 -125739128 + (TCC)n Simple_repeat Simple_repeat 2 31 0 1250 170 87 19 chr10 19850186 19850451 -125738837 - AluJo SINE Alu -29 283 1 2271 105 0 0 chr10 19851552 19851858 -125737430 - AluSg1 SINE Alu -3 306 1 287 249 173 94 chr10 19851859 19852085 -125737203 - L1ME3A LINE L1 -222 5948 5694 30 0 0 0 chr10 19852290 19852320 -125736968 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr10 19855203 19855224 -125734064 + AT_rich Low_complexity Low_complexity 1 21 0 23 78 0 0 chr10 19855854 19855905 -125733383 + AT_rich Low_complexity Low_complexity 1 51 0 1465 98 29 98 chr10 19856844 19856988 -125732300 - Tigger4(Zombi) DNA MER2_type -202 2529 2377 2313 114 0 0 chr10 19856988 19857296 -125731992 - AluSx SINE Alu -4 308 1 1465 98 29 98 chr10 19857296 19857309 -125731979 - Tigger4(Zombi) DNA MER2_type -354 2377 2365 2619 39 0 13 chr10 19857309 19857617 -125731671 - AluY SINE Alu -7 304 1 1465 98 29 98 chr10 19857617 19857774 -125731514 - Tigger4(Zombi) DNA MER2_type -366 2365 2236 659 164 100 0 chr10 19857780 19857920 -125731368 - Tigger4(Zombi) DNA MER2_type -2570 161 8 814 198 139 4 chr10 19857928 19858166 -125731122 + L1MB7 LINE L1 5914 6183 -1 654 196 125 22 chr10 19858920 19859104 -125730184 + MER63A DNA MER1_type 1 203 -7 1519 210 10 3 chr10 19860094 19860385 -125728903 - AluJo SINE Alu -19 293 1 1781 170 0 26 chr10 19860498 19860809 -125728479 + AluJb SINE Alu 1 303 -9 258 268 62 77 chr10 19860970 19861242 -125728046 + L1ME4a LINE L1 5750 6017 -104 727 205 92 20 chr10 19861413 19861608 -125727680 - L1ME2 LINE L1 -13 6151 5943 566 259 88 29 chr10 19861997 19862398 -125726890 - L1MC4a LINE L1 -630 5540 5480 2103 122 0 7 chr10 19862657 19862961 -125726327 - AluSg SINE Alu -8 302 1 778 171 14 7 chr10 19863036 19863060 -125726228 - AluJo SINE Alu -171 141 119 194 0 39 0 chr10 19863060 19863086 -125726202 + (TTTG)n Simple_repeat Simple_repeat 1 27 0 778 171 14 7 chr10 19863086 19863201 -125726087 - AluJo SINE Alu -193 119 1 207 0 0 0 chr10 19863203 19863226 -125726062 + (T)n Simple_repeat Simple_repeat 1 23 0 718 252 13 30 chr10 19863411 19863641 -125725647 - HAL1b LINE L1 -773 575 350 2133 120 7 3 chr10 19863704 19864013 -125725275 - AluSx SINE Alu -2 310 1 423 275 109 31 chr10 19864304 19864653 -125724635 - L1MC4a LINE L1 -1911 5897 5522 1639 127 0 0 chr10 19864911 19865147 -125724141 + AluSx SINE Alu 1 236 -76 1544 202 7 3 chr10 19865247 19865534 -125723754 - AluJb SINE Alu -19 293 6 26 30 0 0 chr10 19865714 19865747 -125723541 + AT_rich Low_complexity Low_complexity 1 33 0 2319 104 0 0 chr10 19866014 19866323 -125722965 - AluSc SINE Alu 0 309 1 636 142 18 0 chr10 19867133 19867246 -125722042 + FLAM_C SINE Alu 1 115 -18 207 167 0 0 chr10 19867288 19867330 -125721958 + (TGAA)n Simple_repeat Simple_repeat 3 44 0 2109 119 0 3 chr10 19869258 19869560 -125719728 - AluSx SINE Alu -10 302 2 268 312 54 57 chr10 19870155 19870439 -125718849 - L2 LINE L2 -264 3008 2737 334 204 175 39 chr10 19870569 19870672 -125718616 + MER5B DNA MER1_type 62 178 0 2324 101 3 22 chr10 19871097 19871415 -125717873 - AluSx SINE Alu 0 312 1 22 35 0 0 chr10 19871425 19871454 -125717834 + AT_rich Low_complexity Low_complexity 1 29 0 1707 146 27 0 chr10 19871454 19871714 -125717574 - AluSx SINE Alu -45 267 1 2434 70 0 3 chr10 19871959 19872261 -125717027 - AluY SINE Alu -10 301 1 1713 175 4 0 chr10 19872385 19872665 -125716623 - AluSg SINE Alu -29 281 1 657 252 0 0 chr10 19872673 19872800 -125716488 - FLAM_C SINE Alu -6 127 1 2382 94 0 3 chr10 19872843 19873151 -125716137 - AluY SINE Alu -4 307 1 989 142 47 0 chr10 19873605 19873753 -125715535 + AluJb SINE Alu 135 289 -23 865 211 76 87 chr10 19874841 19874949 -125714339 + MER39 LTR ERV1 228 336 -317 2206 135 0 0 chr10 19874949 19875253 -125714035 + AluSx SINE Alu 1 304 -8 865 211 76 87 chr10 19875253 19875617 -125713671 + MER39 LTR ERV1 336 653 0 1783 178 14 0 chr10 19875743 19876024 -125713264 + AluJo SINE Alu 1 285 -27 1065 139 18 0 chr10 19876025 19876191 -125713097 + AluSg/x SINE Alu 133 301 -11 615 332 61 40 chr10 19876191 19876690 -125712598 - L2 LINE L2 -18 3295 2778 2089 111 44 0 chr10 19876690 19876988 -125712300 - AluSq SINE Alu -2 311 1 615 332 61 40 chr10 19876988 19877132 -125712156 - L2 LINE L2 -535 2778 2638 1841 169 10 3 chr10 19877992 19878293 -125710995 - AluJo SINE Alu -9 303 1 1963 140 0 0 chr10 19879524 19879810 -125709478 - AluJb SINE Alu -26 286 1 192 315 19 0 chr10 19879831 19879885 -125709403 - L2 LINE L2 -558 2756 2702 21 36 0 0 chr10 19880525 19880553 -125708735 + AT_rich Low_complexity Low_complexity 1 28 0 292 250 12 24 chr10 19880980 19881064 -125708224 + Tigger7 DNA MER2_type 3 85 -254 276 100 0 0 chr10 19881107 19881147 -125708141 + (GGGAGA)n Simple_repeat Simple_repeat 4 43 0 1910 130 11 7 chr10 19881210 19881494 -125707794 + AluSx SINE Alu 3 287 -25 21 0 0 0 chr10 19881495 19881516 -125707772 + AT_rich Low_complexity Low_complexity 1 21 0 460 179 0 43 chr10 19882283 19882423 -125706865 + Tigger7 DNA MER2_type 2366 2499 -88 223 232 18 18 chr10 19882423 19882479 -125706809 + (TATATG)n Simple_repeat Simple_repeat 5 60 0 567 175 0 48 chr10 19882479 19882668 -125706620 + (TA)n Simple_repeat Simple_repeat 1 180 0 518 148 0 0 chr10 19882683 19882764 -125706524 + Tigger7 DNA MER2_type 2401 2481 -6 580 177 38 118 chr10 19882856 19883042 -125706246 + L1MD3 LINE L1 6800 6970 -1025 208 360 93 14 chr10 19883056 19883195 -125706093 - L2 LINE L2 -1452 1862 1713 22 0 0 0 chr10 19885151 19885173 -125704115 + AT_rich Low_complexity Low_complexity 1 22 0 436 241 38 0 chr10 19887555 19887586 -125701702 - L1MA10 LINE L1 -21 6313 6283 437 279 32 19 chr10 19887586 19887744 -125701544 - L1ME1 LINE L1 -45 6121 5962 885 229 188 17 chr10 19887780 19888073 -125701215 - MLT1D LTR MaLR -117 388 46 1400 164 13 8 chr10 19888144 19888382 -125700906 - AluJb SINE Alu -73 239 1 564 167 28 28 chr10 19888759 19888867 -125700421 - AluSx SINE Alu -85 227 120 580 40 0 0 chr10 19888874 19888948 -125700340 - AluSx SINE Alu -239 74 1 3307 125 105 66 chr10 19889718 19890383 -125698905 + LTR8 LTR ERV1 1 691 0 888 230 17 6 chr10 19890937 19891111 -125698177 + MER5A DNA MER1_type 14 189 0 2241 103 3 3 chr10 19891463 19891765 -125697523 - AluSx SINE Alu -10 302 1 2241 112 7 0 chr10 19891983 19892287 -125697001 - AluSq SINE Alu -5 308 3 2425 177 52 14 chr10 19892291 19892787 -125696501 - L1MC1 LINE L1 -5 6328 5814 277 214 14 0 chr10 19892831 19892901 -125696387 - L1ME3A LINE L1 -15 6155 6085 403 264 112 28 chr10 19893488 19893666 -125695622 + MLT1J2 LTR MaLR 254 446 -4 226 274 78 30 chr10 19893954 19894224 -125695064 - L1MEd LINE L1 -3653 2729 2447 1179 248 18 16 chr10 19894345 19894728 -125694560 + L1ME1 LINE L1 4769 5152 -994 2071 108 50 0 chr10 19894731 19895009 -125694279 - AluSp SINE Alu -21 292 1 1717 251 134 14 chr10 19895012 19895802 -125693486 + L1ME1 LINE L1 5277 6161 -5 292 328 56 7 chr10 19895869 19896153 -125693135 - L1MEd LINE L1 -4814 1570 1273 371 279 64 47 chr10 19896292 19896464 -125692824 - L1MEd LINE L1 -5934 438 264 26 0 0 0 chr10 19896517 19896543 -125692745 + AT_rich Low_complexity Low_complexity 1 26 0 32 26 0 0 chr10 19897295 19897334 -125691954 + AT_rich Low_complexity Low_complexity 1 39 0 326 41 0 41 chr10 19898589 19898638 -125690650 + (TCCCC)n Simple_repeat Simple_repeat 5 51 0 2080 121 0 0 chr10 19898640 19898920 -125690368 - AluSx SINE Alu -32 280 1 2021 148 0 7 chr10 19899043 19899340 -125689948 - AluSx SINE Alu -17 295 1 29 28 0 0 chr10 19899599 19899635 -125689653 + AT_rich Low_complexity Low_complexity 1 36 0 28 0 0 0 chr10 19900090 19900118 -125689170 + AT_rich Low_complexity Low_complexity 1 28 0 23 33 0 0 chr10 19900415 19900445 -125688843 + AT_rich Low_complexity Low_complexity 1 30 0 1258 289 131 38 chr10 19900489 19900543 -125688745 + L2 LINE L2 1945 1993 -1321 2373 93 3 0 chr10 19900543 19900845 -125688443 - AluSp SINE Alu -10 303 1 1258 289 131 38 chr10 19900845 19901143 -125688145 + L2 LINE L2 1993 2262 -1052 2159 120 0 29 chr10 19901143 19901451 -125687837 - AluSx SINE Alu -13 299 1 1258 289 131 38 chr10 19901451 19901723 -125687565 + L2 LINE L2 2262 2628 -686 667 309 138 13 chr10 19901723 19902115 -125687173 - MLT1J2 LTR MaLR 0 450 10 1247 263 48 103 chr10 19902117 19902195 -125687093 + L2 LINE L2 2691 2772 -541 188 0 74 0 chr10 19902195 19902222 -125687066 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1247 263 48 103 chr10 19902222 19902348 -125686940 + L2 LINE L2 2772 2903 -410 3379 96 4 0 chr10 19902348 19902837 -125686451 - L1MA2 LINE L1 0 6304 5814 1247 263 48 103 chr10 19902837 19903064 -125686224 + L2 LINE L2 2903 3077 -236 2186 118 3 0 chr10 19903064 19903361 -125685927 - AluSq SINE Alu -15 298 1 1247 263 48 103 chr10 19903361 19903566 -125685722 + L2 LINE L2 3077 3292 -21 1947 164 90 81 chr10 19904208 19904739 -125684549 + LTR10A LTR ERV1 13 548 -61 478 68 0 68 chr10 19904819 19904861 -125684427 - THE1B LTR MaLR -295 69 33 2437 203 25 61 chr10 19904861 19905496 -125683792 + LTR9 LTR ERV1 1 612 0 478 68 0 68 chr10 19905496 19905527 -125683761 - THE1B LTR MaLR -331 33 1 309 284 344 5 chr10 19905623 19905841 -125683447 + MLT1H LTR MaLR 258 549 0 2054 158 0 0 chr10 19906923 19907233 -125682055 - AluSx SINE Alu -2 310 1 941 129 0 0 chr10 19907236 19907368 -125681920 - AluSq/x SINE Alu -180 132 1 2022 152 0 7 chr10 19908183 19908492 -125680796 - AluJb SINE Alu -5 307 1 279 188 125 62 chr10 19908798 19908878 -125680410 + L2 LINE L2 3227 3311 -2 289 254 0 0 chr10 19908900 19908959 -125680329 - L2 LINE L2 -17 3255 3197 2020 138 3 28 chr10 19909103 19909423 -125679865 - AluSq SINE Alu -1 312 1 909 336 65 18 chr10 19910093 19910551 -125678737 + L2 LINE L2 1713 2192 -1122 233 146 21 0 chr10 19910571 19910619 -125678669 + L1MB7 LINE L1 6132 6180 -4 2913 90 12 117 chr10 19910702 19911061 -125678227 - L1PB1 LINE L1 0 6151 5756 192 77 0 0 chr10 19911061 19911087 -125678201 + (TA)n Simple_repeat Simple_repeat 2 27 0 2913 90 12 117 chr10 19911087 19911254 -125678034 - L1PB1 LINE L1 -395 5756 5693 186 43 0 0 chr10 19911254 19911277 -125678011 + (TCTA)n Simple_repeat Simple_repeat 4 26 0 2913 90 12 117 chr10 19911277 19911347 -125677941 - L1PB1 LINE L1 -458 5693 5617 879 340 110 26 chr10 19911352 19911920 -125677368 + L2 LINE L2 2470 3140 -173 3334 132 13 17 chr10 19911920 19912449 -125676839 - MER1A DNA MER1_type 0 527 1 879 340 110 26 chr10 19912449 19912639 -125676649 + L2 LINE L2 3140 3313 0 24 0 0 0 chr10 19913370 19913394 -125675894 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr10 19913434 19913456 -125675832 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr10 19913578 19913602 -125675686 + AT_rich Low_complexity Low_complexity 1 24 0 32 43 0 0 chr10 19913811 19913857 -125675431 + AT_rich Low_complexity Low_complexity 1 46 0 2090 114 0 23 chr10 19914043 19914350 -125674938 - AluSg SINE Alu -10 300 1 1441 297 101 26 chr10 19915384 19916377 -125672911 - L2 LINE L2 0 3313 2238 1906 142 44 25 chr10 19916410 19916777 -125672511 + THE1C LTR MaLR 1 374 -1 495 277 173 12 chr10 19917168 19917417 -125671871 - L2 LINE L2 0 3313 3025 1701 182 3 10 chr10 19917971 19918273 -125671015 - AluJo SINE Alu -12 300 1 779 148 49 0 chr10 19918480 19918622 -125670666 - L1MA3 LINE L1 0 6305 6157 2124 99 44 10 chr10 19918651 19918945 -125670343 + AluSq SINE Alu 1 304 -9 386 285 87 50 chr10 19919115 19919357 -125669931 + MIR SINE MIR 4 254 -8 4589 188 50 16 chr10 19919834 19921461 -125667827 - L1MB3 LINE L1 -2 6181 4488 2463 112 22 0 chr10 19921461 19921817 -125667471 - THE1B LTR MaLR 0 364 1 4589 188 50 16 chr10 19921817 19921999 -125667289 - L1MB3 LINE L1 -1695 4488 4314 1970 155 0 7 chr10 19922290 19922586 -125666702 - AluSx SINE Alu -18 294 1 2182 97 0 3 chr10 19922650 19922940 -125666348 - AluSq SINE Alu -24 289 1 243 394 39 0 chr10 19922972 19923076 -125666212 + MIR SINE MIR 52 159 -103 2025 140 0 10 chr10 19924278 19924586 -125664702 + AluSx SINE Alu 1 305 -7 206 309 145 65 chr10 19925769 19926170 -125663118 - L2 LINE L2 -337 2977 2545 365 49 18 35 chr10 19926183 19926243 -125663045 + AluJb SINE Alu 87 139 -163 376 221 74 156 chr10 19926283 19926527 -125662761 - MIR SINE MIR -21 241 18 866 252 116 26 chr10 19928398 19928855 -125660433 - L1ME4a LINE L1 -5 6116 5619 4050 166 20 4 chr10 19928874 19929574 -125659714 + MER50 LTR ERV1 1 711 -23 620 183 14 114 chr10 19929631 19929850 -125659438 - L1MB7 LINE L1 -66 6118 5922 1727 243 50 38 chr10 19929949 19930447 -125658841 + MLT1F LTR MaLR 38 541 -1 1167 265 121 44 chr10 19930844 19931419 -125657869 + MLT1G LTR MaLR 1 590 0 225 101 89 30 chr10 19931655 19931824 -125657464 + (TA)n Simple_repeat Simple_repeat 2 180 0 24 0 0 0 chr10 19931916 19931940 -125657348 + AT_rich Low_complexity Low_complexity 1 24 0 2184 175 40 52 chr10 19931940 19932386 -125656902 - MLT2B2 LTR ERVL -74 441 1 410 315 112 39 chr10 19932489 19932775 -125656513 - L2 LINE L2 -2 3311 3005 5204 139 14 13 chr10 19934311 19936278 -125653010 - L1PA15 LINE L1 -4 6161 4111 21 36 0 0 chr10 19936457 19936485 -125652803 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr10 19937391 19937414 -125651874 + AT_rich Low_complexity Low_complexity 1 23 0 229 229 0 16 chr10 19938031 19938092 -125651196 - LTR66 LTR ERVL -157 453 394 337 282 92 43 chr10 19938831 19938994 -125650294 + MIR3 SINE MIR 21 191 -17 228 35 0 0 chr10 19939246 19939275 -125650013 + (TTCTC)n Simple_repeat Simple_repeat 4 32 0 2258 116 0 0 chr10 19939275 19939585 -125649703 - AluSx SINE Alu -2 310 1 334 287 148 0 chr10 19939657 19939779 -125649509 - MER5A DNA MER1_type -1 188 49 2432 76 0 10 chr10 19939911 19940214 -125649074 - AluY SINE Alu -11 300 1 2329 97 57 14 chr10 19941235 19941584 -125647704 + THE1B LTR MaLR 1 364 0 275 354 30 30 chr10 19941674 19941838 -125647450 + MER5A DNA MER1_type 24 187 -2 859 199 5 0 chr10 19942233 19942429 -125646859 - L1 LINE L1 -1648 4498 4302 4309 128 15 0 chr10 19942429 19943078 -125646210 + L1PA16 LINE L1 5497 6157 -9 329 258 188 23 chr10 19943091 19943219 -125646069 + MER5B DNA MER1_type 29 177 -1 1817 145 52 55 chr10 19943748 19944113 -125645175 - THE1B LTR MaLR 0 364 1 224 324 127 70 chr10 19944127 19944269 -125645019 - L2 LINE L2 0 3272 3123 278 327 25 25 chr10 19944414 19944576 -125644712 - L2 LINE L2 -182 3090 2929 2354 97 0 13 chr10 19944661 19944972 -125644316 - AluY SINE Alu -4 307 1 23 68 0 0 chr10 19946814 19946858 -125642430 + AT_rich Low_complexity Low_complexity 1 44 0 631 294 71 5 chr10 19947043 19947254 -125642034 + L1PA16 LINE L1 2 226 -6561 1151 261 60 23 chr10 19947547 19947945 -125641343 + L1PA16 LINE L1 1267 1679 -5108 14519 223 26 18 chr10 19947959 19949635 -125639653 + L1PA16 LINE L1 1996 3657 -3160 2411 65 0 10 chr10 19949635 19949927 -125639361 + AluY SINE Alu 3 291 -20 14519 223 26 18 chr10 19949927 19953040 -125636248 + L1PA16 LINE L1 3657 6817 0 3068 194 36 58 chr10 19953156 19953951 -125635337 - L1MB8 LINE L1 -5 6173 5396 23 68 0 0 chr10 19953976 19954020 -125635268 + AT_rich Low_complexity Low_complexity 1 44 0 808 146 0 31 chr10 19955280 19955410 -125633878 - FLAM_C SINE Alu -7 126 1 872 250 97 38 chr10 19955859 19955917 -125633371 + MER45C DNA AcHobo 1 54 -899 1670 186 30 19 chr10 19955917 19956288 -125633000 - THE1C LTR MaLR 0 375 1 872 250 97 38 chr10 19956288 19956517 -125632771 + MER45C DNA AcHobo 54 305 -648 458 143 161 143 chr10 19956563 19956582 -125632706 + MER45C DNA AcHobo 783 800 -781 216 0 0 0 chr10 19956582 19956606 -125632682 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 458 143 161 143 chr10 19956606 19956754 -125632534 + MER45C DNA AcHobo 800 953 0 23 0 0 0 chr10 19957001 19957024 -125632264 + AT_rich Low_complexity Low_complexity 1 23 0 1691 197 27 0 chr10 19958622 19958922 -125630366 - AluJb SINE Alu -4 308 1 208 176 59 0 chr10 19958967 19959018 -125630270 + (TCTA)n Simple_repeat Simple_repeat 4 57 0 180 0 0 0 chr10 19959140 19959160 -125630128 + (GAAAA)n Simple_repeat Simple_repeat 2 21 0 22 35 0 0 chr10 19959290 19959319 -125629969 + AT_rich Low_complexity Low_complexity 1 29 0 1650 177 33 10 chr10 19960549 19960854 -125628434 + AluJo SINE Alu 1 312 0 663 111 0 0 chr10 19962206 19962296 -125626992 + AluSg/x SINE Alu 208 297 -15 616 227 7 0 chr10 19962363 19962504 -125626784 - L1MA10 LINE L1 -13 6321 6180 359 169 8 34 chr10 19962525 19962643 -125626645 + CT-rich Low_complexity Low_complexity 3 117 0 1529 52 0 33 chr10 19962644 19962856 -125626432 + L1PA6 LINE L1 5950 6154 0 1708 197 72 69 chr10 19963552 19964329 -125624959 - L1MC/D LINE L1 -593 5751 4991 4185 55 21 69 chr10 19964331 19965444 -125623844 - MER11A LTR ERVK -2 1264 1 444 206 9 0 chr10 19965444 19965551 -125623737 - L1MC/D LINE L1 -1150 4996 4889 5653 237 57 19 chr10 19965653 19967519 -125621769 - L1MC/D LINE L1 -1262 4884 2949 342 80 0 0 chr10 19968677 19968727 -125620561 + (TC)n Simple_repeat Simple_repeat 2 51 0 1030 162 0 0 chr10 19968730 19968884 -125620404 - AluJb SINE Alu -23 289 136 598 233 91 28 chr10 19969519 19969695 -125619593 - MER5A DNA MER1_type -1 188 2 6592 51 6 3 chr10 19970121 19971759 -125617529 + L1PA4 LINE L1 4550 6152 -3 2305 108 3 0 chr10 19972277 19972574 -125616714 + AluSx SINE Alu 1 298 -14 414 300 90 60 chr10 19972721 19973021 -125616267 + MLT1H LTR MaLR 13 321 -228 899 261 0 0 chr10 19973067 19973243 -125616045 + MER58A DNA MER1_type 1 176 -48 412 173 205 47 chr10 19973289 19973416 -125615872 + MLT1H LTR MaLR 402 548 -1 191 345 133 0 chr10 19973530 19973643 -125615645 - MIR3 SINE MIR -4 204 77 21 36 0 0 chr10 19974017 19974045 -125615243 + AT_rich Low_complexity Low_complexity 1 28 0 491 323 117 22 chr10 19974890 19975293 -125613995 - L1M4 LINE L1 -2167 3979 3539 1083 158 42 9 chr10 19975309 19975524 -125613764 - L1PA14 LINE L1 -70 6091 5870 6429 80 7 1 chr10 19975681 19976553 -125612735 - L1PA7 LINE L1 -3 6151 5275 1109 82 0 0 chr10 19976554 19976701 -125612587 + L1PA7 LINE L1 5121 5267 -879 309 279 96 29 chr10 19976856 19977064 -125612224 - L1M4 LINE L1 -778 5368 5147 249 316 102 31 chr10 19977301 19977526 -125611762 - L1M4 LINE L1 -1343 4803 4563 352 313 147 11 chr10 19978173 19978528 -125610760 - L1MC4a LINE L1 -1878 5864 5462 28 0 0 0 chr10 19978684 19978712 -125610576 + AT_rich Low_complexity Low_complexity 1 28 0 516 275 106 88 chr10 19978839 19978905 -125610383 - L1MC4a LINE L1 -1089 4991 4928 1394 202 7 37 chr10 19978905 19979202 -125610086 - AluJo SINE Alu -23 289 2 516 275 106 88 chr10 19979202 19979814 -125609474 - L1MC4a LINE L1 -1152 4928 4301 1966 144 7 3 chr10 19980751 19981050 -125608238 - AluSx SINE Alu -12 300 1 4057 125 20 14 chr10 19982038 19982728 -125606560 + L1MA5A LINE L1 5600 6293 -4 309 277 75 75 chr10 19982776 19982964 -125606324 - L1MC4a LINE L1 -5881 189 2 30 0 0 0 chr10 19983288 19983318 -125605970 + AT_rich Low_complexity Low_complexity 1 30 0 325 291 29 39 chr10 19983515 19983618 -125605670 - MER5A DNA MER1_type -19 170 69 1671 187 0 23 chr10 19984196 19984501 -125604787 - AluJb SINE Alu -14 298 1 545 260 88 28 chr10 19985073 19985254 -125604034 + MIR SINE MIR 40 231 -31 339 339 17 0 chr10 19985303 19985418 -125603870 + MER5B DNA MER1_type 3 119 -59 269 219 110 14 chr10 19986432 19986505 -125602783 + MIR SINE MIR 90 169 -93 241 127 0 48 chr10 19986525 19986588 -125602700 + (TTTTA)n Simple_repeat Simple_repeat 1 60 0 198 174 22 22 chr10 19986592 19986638 -125602650 + MIR SINE MIR 212 257 -5 2224 120 47 33 chr10 19987180 19987539 -125601749 + THE1B LTR MaLR 1 364 0 269 246 223 31 chr10 19987625 19987755 -125601533 + LTR16C LTR ERVL 100 254 -237 381 242 45 8 chr10 19987798 19987930 -125601358 + LTR16C LTR ERVL 354 490 -1 1460 215 19 25 chr10 19988045 19988408 -125600880 + MLT1A1 LTR MaLR 1 361 -4 2050 132 0 16 chr10 19988490 19988793 -125600495 + AluSx SINE Alu 1 298 -14 432 308 98 62 chr10 19989302 19989688 -125599600 - MLT1J LTR MaLR 0 511 112 27 0 0 0 chr10 19991747 19991774 -125597514 + AT_rich Low_complexity Low_complexity 1 27 0 1792 135 48 10 chr10 19992005 19992294 -125596994 - AluSg SINE Alu -10 300 1 3705 124 0 8 chr10 19992761 19993292 -125595996 - MER1A DNA MER1_type 0 527 1 260 53 26 0 chr10 19993422 19993460 -125595828 + (TA)n Simple_repeat Simple_repeat 2 40 0 282 259 0 86 chr10 19994421 19994502 -125594786 - Tigger2 DNA MER2_type 0 2718 2645 1129 162 125 88 chr10 19994511 19994783 -125594505 - AluJb SINE Alu -30 282 1 181 351 120 37 chr10 19995272 19995514 -125593774 + L3b LINE CR1 1227 1488 -95 957 254 14 0 chr10 19995562 19995782 -125593506 - MER58A DNA MER1_type -1 223 1 2095 107 10 7 chr10 19995958 19996249 -125593039 - AluSq SINE Alu -21 292 1 223 329 24 12 chr10 19996321 19996403 -125592885 + L2 LINE L2 3226 3308 -5 1549 303 58 14 chr10 19997216 19997770 -125591518 + L1MEc LINE L1 70 647 -5749 604 288 87 17 chr10 19997803 19998147 -125591141 + L1MEc LINE L1 996 1363 -5033 * 4546 246 97 40 chr10 19998128 19999392 -125589896 + L1MEc LINE L1 1740 2930 -3285 1971 149 3 0 chr10 19999392 19999688 -125589600 + AluSq SINE Alu 3 299 -14 4546 246 97 40 chr10 19999688 20000966 -125588322 + L1MEc LINE L1 2930 4399 -1816 484 191 27 27 chr10 20000964 20001074 -125588214 + L1PB4 LINE L1 6045 6154 -2 * 543 261 16 49 chr10 20001086 20001270 -125588018 + L1ME2 LINE L1 5935 6112 -52 4673 231 37 100 chr10 20001305 20003892 -125585396 - L1 LINE L1 -1537 4609 2186 2121 119 3 0 chr10 20003894 20004188 -125585100 - AluSx SINE Alu -17 295 1 215 235 0 0 chr10 20006411 20006462 -125582826 + L2 LINE L2 3190 3240 -73 1951 146 3 10 chr10 20006902 20007203 -125582085 + AluJb SINE Alu 1 299 -13 288 300 18 27 chr10 20007222 20007332 -125581956 + MER5B DNA MER1_type 1 109 -69 613 144 39 0 chr10 20007668 20007772 -125581516 + L1PB1 LINE L1 75 182 -6681 * 6267 159 9 39 chr10 20007763 20009927 -125579361 + L1PB1 LINE L1 4780 6867 0 3252 260 60 6 chr10 20010864 20012044 -125577244 - L1M4 LINE L1 -1430 4716 3473 669 145 79 13 chr10 20012021 20012173 -125577115 - L1MC3 LINE L1 -2 7783 7622 * 1457 250 68 71 chr10 20012177 20012781 -125576507 - LTR9B LTR ERV1 -36 608 7 1885 183 93 0 chr10 20012785 20013183 -125576105 - L1MC3 LINE L1 -1206 6579 6145 778 228 38 82 chr10 20013152 20013494 -125575794 - L1MCa LINE L1 -5213 1213 887 * 291 152 0 0 chr10 20013491 20013537 -125575751 - L1MDa LINE L1 -3423 3117 3072 * 1290 68 6 11 chr10 20013537 20013713 -125575575 - LTR7 LTR ERV1 -2 448 274 944 253 30 37 chr10 20013834 20014237 -125575051 - L1MDa LINE L1 -3571 2969 2570 1231 190 24 16 chr10 20014287 20014534 -125574754 - L1MB1 LINE L1 -23 6145 5897 * 1769 242 59 41 chr10 20014532 20015222 -125574066 - L1MDa LINE L1 -3950 2590 1914 2251 102 0 16 chr10 20015222 20015525 -125573763 + AluY SINE Alu 1 298 -13 1769 242 59 41 chr10 20015525 20015541 -125573747 - L1MDa LINE L1 -4626 1914 1900 1582 171 0 90 chr10 20015541 20015896 -125573392 - AluJb SINE Alu 0 312 1 1769 242 59 41 chr10 20015896 20015970 -125573318 - L1MDa LINE L1 -4640 1900 1795 1291 124 10 0 chr10 20015971 20016165 -125573123 + L1PA16 LINE L1 5859 6054 -112 186 306 50 63 chr10 20018455 20018677 -125570611 + L2 LINE L2 701 919 -2395 180 135 0 0 chr10 20019057 20019094 -125570194 + (TC)n Simple_repeat Simple_repeat 2 38 0 22 0 0 0 chr10 20019171 20019193 -125570095 + AT_rich Low_complexity Low_complexity 1 22 0 1254 162 71 12 chr10 20019332 20019585 -125569703 + AluJb SINE Alu 26 293 -19 1485 223 135 24 chr10 20021053 20021476 -125567812 + MLT1D LTR MaLR 1 479 -26 2035 114 0 0 chr10 20021476 20021787 -125567501 + AluY SINE Alu 12 322 0 1485 223 135 24 chr10 20021787 20021815 -125567473 + MLT1D LTR MaLR 479 503 -2 962 244 30 33 chr10 20021865 20022136 -125567152 + LTR46-int LTR ERV1 675 944 -4642 577 303 47 73 chr10 20022162 20022779 -125566509 + LTR46-int LTR ERV1 4242 5371 -2347 228 35 0 0 chr10 20024776 20024805 -125564483 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 972 125 0 0 chr10 20024913 20025049 -125564239 + AluSg/x SINE Alu 161 296 -16 22 0 0 0 chr10 20025468 20025490 -125563798 + AT_rich Low_complexity Low_complexity 1 22 0 216 0 0 0 chr10 20025624 20025648 -125563640 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 263 300 107 29 chr10 20025977 20026117 -125563171 + MIR SINE MIR 69 219 -43 1024 298 135 27 chr10 20026916 20027757 -125561531 - L2 LINE L2 -12 3301 2379 915 197 2 14 chr10 20027810 20027826 -125561462 - L1PB3 LINE L1 0 6151 6136 372 43 0 0 chr10 20027826 20027872 -125561416 + (TCTA)n Simple_repeat Simple_repeat 1 46 0 915 197 2 14 chr10 20027872 20028046 -125561242 - L1PB3 LINE L1 -15 6136 5964 367 211 28 0 chr10 20028087 20028196 -125561092 + (CATA)n Simple_repeat Simple_repeat 3 114 0 317 244 37 24 chr10 20028383 20028465 -125560823 - MIR SINE MIR -171 91 9 218 325 137 8 chr10 20031429 20031546 -125557742 - L2 LINE L2 -260 3053 2922 1898 155 0 7 chr10 20032593 20032897 -125556391 - AluJo SINE Alu -10 302 1 1967 176 62 36 chr10 20033700 20034086 -125555202 - MSTD LTR MaLR 0 396 1 21 0 0 0 chr10 20034314 20034335 -125554953 + AT_rich Low_complexity Low_complexity 1 21 0 916 100 0 0 chr10 20034335 20034455 -125554833 - L1MA3 LINE L1 -5 6300 6181 836 204 34 17 chr10 20036281 20036457 -125552831 + MER5A DNA MER1_type 11 189 0 813 228 28 38 chr10 20036465 20036676 -125552612 + MER3 DNA MER1_type 1 209 0 423 189 126 45 chr10 20037659 20037770 -125551518 - MIR3 SINE MIR -6 202 83 215 211 0 0 chr10 20038920 20038958 -125550330 + polypurine Low_complexity Low_complexity 3 40 0 638 129 83 76 chr10 20039382 20039514 -125549774 - FLAM_C SINE Alu 0 133 1 532 116 32 42 chr10 20039615 20039710 -125549578 - L1P LINE L1 -1552 4594 4501 1178 143 261 29 chr10 20040399 20040644 -125548644 - AluJo SINE Alu 0 302 1 1728 138 12 0 chr10 20040871 20041124 -125548164 - AluSx SINE Alu -13 299 44 434 109 62 0 chr10 20041639 20041703 -125547585 - AluJo SINE Alu -178 134 67 1746 209 63 56 chr10 20041754 20042184 -125547104 - Tigger2a DNA MER2_type 0 434 2 2314 93 0 3 chr10 20042226 20042516 -125546772 + AluY SINE Alu 1 289 -22 21 0 0 0 chr10 20043327 20043348 -125545940 + AT_rich Low_complexity Low_complexity 1 21 0 2489 85 0 0 chr10 20044244 20044550 -125544738 + AluSg SINE Alu 1 306 -4 344 179 0 0 chr10 20044562 20044618 -125544670 + AluJ/FLAM SINE Alu 2 57 -245 336 248 43 60 chr10 20044863 20044980 -125544308 + L2 LINE L2 3158 3272 0 510 58 35 11 chr10 20045997 20046084 -125543204 + (GAAA)n Simple_repeat Simple_repeat 2 90 0 1993 154 21 21 chr10 20046946 20047283 -125542005 - MER44D DNA MER2_type -2 607 1 21 0 0 0 chr10 20047386 20047407 -125541881 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 20047462 20047483 -125541805 + AT_rich Low_complexity Low_complexity 1 21 0 3033 172 4 4 chr10 20047578 20048124 -125541164 - L1P LINE L1 -1101 5045 4500 1938 157 0 0 chr10 20048795 20049094 -125540194 - AluSg SINE Alu -10 300 2 331 170 0 0 chr10 20049094 20049147 -125540141 + MER58A DNA MER1_type 172 224 0 601 290 97 13 chr10 20049316 20049554 -125539734 + MLT1L LTR MaLR 113 370 -245 1745 139 44 17 chr10 20049581 20049875 -125539413 + AluSg SINE Alu 1 302 -8 1692 150 66 4 chr10 20050689 20050963 -125538325 - AluSx SINE Alu -19 293 3 317 75 19 0 chr10 20051303 20051356 -125537932 + (TG)n Simple_repeat Simple_repeat 2 55 0 1644 43 0 0 chr10 20051386 20051573 -125537715 - L1PA6 LINE L1 0 6154 5968 2227 122 3 0 chr10 20052404 20052716 -125536572 + AluSq SINE Alu 1 313 0 1761 169 0 17 chr10 20053119 20053409 -125535879 - AluSx SINE Alu -25 287 3 301 252 208 38 chr10 20053439 20053598 -125535690 + L2 LINE L2 3123 3308 -5 2205 120 0 13 chr10 20053743 20054051 -125535237 + AluSc SINE Alu 1 304 -5 1044 191 71 0 chr10 20054242 20054452 -125534836 - MSTA LTR MaLR 0 428 204 2966 94 3 0 chr10 20054978 20055341 -125533947 - THE1B LTR MaLR 0 364 1 1557 173 17 23 chr10 20056183 20056483 -125532805 - AluJo SINE Alu -10 302 5 305 297 120 56 chr10 20057124 20057481 -125531807 + L1MEd LINE L1 676 1055 -5064 289 335 54 14 chr10 20057527 20057748 -125531540 + HAL1 LINE L1 1231 1460 -1047 3848 207 59 9 chr10 20057901 20058714 -125530574 - MER21B LTR ERV1 -5 858 5 2897 195 68 17 chr10 20058716 20059373 -125529915 + MER44D DNA MER2_type 15 705 0 473 330 94 26 chr10 20059769 20060111 -125529177 + L2 LINE L2 2026 2390 -924 185 281 75 34 chr10 20060392 20060538 -125528750 - L2 LINE L2 -722 2592 2441 612 212 0 0 chr10 20060726 20060839 -125528449 - AluJb SINE Alu -14 298 186 414 216 0 0 chr10 20060882 20060970 -125528318 + AluJ/FLAM SINE Alu 12 99 -213 2704 148 2 0 chr10 20060989 20061423 -125527865 - MER1A DNA MER1_type -36 493 59 240 227 80 0 chr10 20061732 20061807 -125527481 - LTR41 LTR ERVL -5 768 688 1890 89 0 4 chr10 20061972 20062209 -125527079 + AluSq SINE Alu 1 236 -77 207 204 0 0 chr10 20064316 20064360 -125524928 + (CATATA)n Simple_repeat Simple_repeat 4 47 0 1592 109 0 0 chr10 20065747 20065949 -125523339 - AluSc SINE Alu -107 202 1 820 228 29 29 chr10 20065952 20066268 -125523020 - L1M1 LINE L1 -3954 3611 3296 337 174 12 12 chr10 20066303 20066389 -125522899 - L1MCa LINE L1 -4403 2023 1938 * 2085 215 89 19 chr10 20066386 20067014 -125522274 + L1ME1 LINE L1 5334 6005 -161 703 154 51 0 chr10 20067456 20067573 -125521715 + FLAM_A SINE Alu 1 123 -10 30 27 0 0 chr10 20068023 20068060 -125521228 + AT_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr10 20068624 20068647 -125520641 + AT_rich Low_complexity Low_complexity 1 23 0 37 23 0 0 chr10 20068912 20068956 -125520332 + AT_rich Low_complexity Low_complexity 1 44 0 23 0 0 0 chr10 20069281 20069304 -125519984 + AT_rich Low_complexity Low_complexity 1 23 0 2106 120 10 3 chr10 20069725 20070024 -125519264 - AluSx SINE Alu -11 301 1 806 343 32 18 chr10 20070063 20070238 -125519050 + L2 LINE L2 925 1096 -2218 4848 60 0 2 chr10 20070238 20070826 -125518462 - LTR14C LTR ERVK 0 587 1 806 343 32 18 chr10 20070826 20070988 -125518300 + L2 LINE L2 1096 1267 -2047 240 375 91 12 chr10 20071051 20071304 -125517984 - L2 LINE L2 -810 2504 2232 1396 165 131 15 chr10 20071487 20071738 -125517550 + AluJo SINE Alu 1 286 -16 351 0 0 0 chr10 20071738 20071777 -125517511 + (CAAT)n Simple_repeat Simple_repeat 2 40 0 1396 165 131 15 chr10 20071777 20071792 -125517496 + AluJo SINE Alu 286 298 -4 301 293 93 34 chr10 20071938 20072143 -125517145 - L2 LINE L2 -1400 1914 1698 246 105 0 0 chr10 20072293 20072331 -125516957 + (GA)n Simple_repeat Simple_repeat 2 39 0 253 323 189 0 chr10 20072673 20072800 -125516488 - MIR SINE MIR 0 262 112 184 256 0 0 chr10 20072978 20073017 -125516271 - MIR SINE MIR -89 119 81 612 234 136 7 chr10 20073148 20073302 -125515986 - MIR SINE MIR -65 197 24 324 179 30 0 chr10 20075087 20075154 -125514134 - L1MA10 LINE L1 -13 6321 6253 1633 199 22 49 chr10 20075642 20076049 -125513239 - MLT2B3 LTR ERVL -158 396 1 807 274 91 87 chr10 20076360 20076877 -125512411 - L2 LINE L2 -1 3312 2799 1770 144 0 8 chr10 20076877 20077141 -125512147 - AluJo SINE Alu -14 298 37 807 274 91 87 chr10 20077141 20077234 -125512054 - L2 LINE L2 -514 2799 2708 1923 138 3 20 chr10 20077234 20077530 -125511758 - AluSx SINE Alu -21 291 1 807 274 91 87 chr10 20077530 20077754 -125511534 - L2 LINE L2 -605 2708 2472 1093 223 77 21 chr10 20077974 20078301 -125510987 - MLT1C LTR MaLR -120 347 3 918 234 33 29 chr10 20078394 20078667 -125510621 - LTR40b LTR ERVL -52 410 137 180 0 0 0 chr10 20078965 20078985 -125510303 + (A)n Simple_repeat Simple_repeat 1 20 0 2060 142 0 0 chr10 20079005 20079307 -125509981 + AluSx SINE Alu 1 302 -10 267 333 28 9 chr10 20079357 20079465 -125509823 - MIR SINE MIR -147 115 6 2395 128 16 3 chr10 20080191 20080559 -125508729 + THE1C LTR MaLR 1 373 -2 902 290 86 25 chr10 20081261 20081439 -125507849 - MLT1G1 LTR MaLR 0 595 429 819 164 0 0 chr10 20081439 20081567 -125507721 - FLAM_C SINE Alu -4 129 2 902 290 86 25 chr10 20081567 20081897 -125507391 - MLT1G1 LTR MaLR -166 429 10 1681 124 0 4 chr10 20081953 20082195 -125507093 - AluSx SINE Alu -25 287 47 21 0 0 0 chr10 20082484 20082505 -125506783 + AT_rich Low_complexity Low_complexity 1 21 0 1984 160 61 27 chr10 20083414 20083919 -125505369 + MLT2A2 LTR ERVL 8 554 0 1898 152 7 3 chr10 20084262 20084552 -125504736 - AluJb SINE Alu -21 291 1 3165 90 76 0 chr10 20084987 20085474 -125503814 - L1MA3 LINE L1 -8 6297 5774 298 206 31 41 chr10 20085496 20085593 -125503695 + LTR16C LTR ERVL 366 461 -30 375 228 88 15 chr10 20086782 20086918 -125502370 - MER104 DNA Tc2 -34 146 1 558 229 0 0 chr10 20087439 20087579 -125501709 - L1MD3 LINE L1 -10 7985 7846 2228 103 7 0 chr10 20087584 20087884 -125501404 + AluSx SINE Alu 5 306 -6 15748 198 36 16 chr10 20087932 20088853 -125500435 + ERVL-D LTR ERVL 176 1077 -4687 225 0 0 0 chr10 20088853 20088878 -125500410 + (TTGG)n Simple_repeat Simple_repeat 1 25 0 15748 198 36 16 chr10 20088878 20090935 -125498353 + ERVL-D LTR ERVL 1077 3314 -2450 1462 187 39 42 chr10 20090935 20091219 -125498069 - AluJb SINE Alu -29 283 1 15748 198 36 16 chr10 20091219 20091972 -125497316 + ERVL-D LTR ERVL 3314 4051 -1713 3636 169 67 11 chr10 20091976 20092709 -125496579 + ERVL-D LTR ERVL 4969 5742 -22 364 119 15 0 chr10 20092746 20092813 -125496475 + ERVL-D LTR ERVL 5681 5748 -16 1110 210 62 80 chr10 20092822 20093174 -125496114 + MLT2D LTR ERVL 1 296 -118 369 281 0 0 chr10 20093170 20093252 -125496036 + MLT2D LTR ERVL 240 321 -93 * 261 81 0 0 chr10 20093256 20093293 -125495995 + MLT2C2 LTR ERVL 428 464 0 3343 154 31 25 chr10 20093294 20093968 -125495320 - MER67C LTR ERV1 -32 678 1 281 265 76 23 chr10 20093968 20094100 -125495188 - L1ME LINE L1 -285 5862 5724 386 85 17 0 chr10 20094115 20094174 -125495114 + (TCC)n Simple_repeat Simple_repeat 2 61 0 479 157 0 74 chr10 20094222 20094343 -125494945 + AluSg/x SINE Alu 173 284 -25 1679 103 16 119 chr10 20094603 20094915 -125494373 - AluSx SINE Alu -32 280 1 335 301 91 13 chr10 20094927 20095312 -125493976 - L1ME LINE L1 -816 5313 4899 505 286 112 4 chr10 20095725 20096001 -125493287 - L1ME LINE L1 -4918 1201 896 43 81 0 0 chr10 20096136 20096235 -125493053 + AT_rich Low_complexity Low_complexity 1 99 0 307 197 39 39 chr10 20096238 20096416 -125492872 + (TAA)n Simple_repeat Simple_repeat 3 180 0 * 337 163 26 84 chr10 20096360 20096550 -125492738 + (TTATA)n Simple_repeat Simple_repeat 2 180 0 345 298 146 7 chr10 20096572 20096723 -125492565 - L1ME LINE L1 -5339 780 609 3882 48 0 0 chr10 20096987 20097470 -125491818 - L1PA4 LINE L1 0 6155 5673 346 324 32 74 chr10 20097514 20097826 -125491462 - L1ME LINE L1 -5818 301 3 1514 112 14 14 chr10 20099081 20099296 -125489992 + AluSg/x SINE Alu 91 305 -7 592 288 27 22 chr10 20099304 20099488 -125489800 - MIR SINE MIR -24 238 54 365 380 21 0 chr10 20099983 20100125 -125489163 - MIR3 SINE MIR -11 197 53 267 286 0 0 chr10 20101192 20101269 -125488019 - L1ME LINE L1 -426 5695 5619 2156 198 128 68 chr10 20101463 20102242 -125487046 + LTR1B LTR ERV1 1 826 0 265 278 72 0 chr10 20102247 20102344 -125486944 - MIR SINE MIR -54 208 105 392 338 122 5 chr10 20103134 20103347 -125485941 - MIR SINE MIR -13 249 12 2079 123 14 0 chr10 20103950 20104242 -125485046 + AluSx SINE Alu 1 296 -16 243 0 0 0 chr10 20104609 20104636 -125484652 + (T)n Simple_repeat Simple_repeat 1 27 0 2592 51 3 3 chr10 20104821 20105137 -125484151 + AluYb8 SINE Alu 1 316 -2 198 0 0 0 chr10 20105445 20105467 -125483821 + (TTTA)n Simple_repeat Simple_repeat 1 22 0 894 108 0 0 chr10 20105467 20105587 -125483701 - AluSc SINE Alu -32 277 158 465 315 94 8 chr10 20105976 20106230 -125483058 + LTR33A LTR ERVL 227 502 -21 2029 188 53 2 chr10 20106338 20106775 -125482513 + MLT1C LTR MaLR 6 464 -3 1908 146 23 3 chr10 20106976 20107278 -125482010 + AluSx SINE Alu 3 310 -2 816 231 108 10 chr10 20107444 20107647 -125481641 - MER58A DNA MER1_type -1 223 1 6502 88 13 2 chr10 20107808 20108756 -125480532 + L1PA10 LINE L1 5210 6164 -4 825 293 64 45 chr10 20108784 20109374 -125479914 - L1ME3A LINE L1 -295 5875 5258 21 57 0 0 chr10 20109681 20109716 -125479572 + AT_rich Low_complexity Low_complexity 1 35 0 214 233 23 12 chr10 20109718 20109804 -125479484 + (TATAA)n Simple_repeat Simple_repeat 4 90 0 1407 298 56 38 chr10 20110783 20111514 -125477774 - L1ME3A LINE L1 -36 6945 6202 330 284 66 65 chr10 20111545 20113100 -125476188 - L1M4b LINE L1 -3892 3065 1359 25 0 0 0 chr10 20114036 20114061 -125475227 + AT_rich Low_complexity Low_complexity 1 25 0 300 303 120 17 chr10 20114169 20114344 -125474944 - MLT1E LTR MaLR -9 558 366 1493 177 44 6 chr10 20114481 20114798 -125474490 - L1MA9 LINE L1 0 6312 5984 337 317 0 4 chr10 20114802 20114885 -125474403 - MLT1E LTR MaLR -203 392 240 292 311 22 73 chr10 20114987 20115189 -125474099 + MLT1H1 LTR MaLR 66 224 -306 262 283 98 11 chr10 20115530 20115622 -125473666 + L2 LINE L2 3163 3262 -10 2038 43 51 0 chr10 20116027 20116283 -125473005 + AluY SINE Alu 43 311 0 296 330 0 43 chr10 20116308 20116402 -125472886 - L2 LINE L2 -15 3298 3209 2777 7 0 0 chr10 20116682 20116982 -125472306 - AluYa5 SINE Alu -11 300 1 559 208 0 0 chr10 20117155 20117251 -125472037 - MLT1E LTR MaLR -458 135 40 617 205 49 58 chr10 20117273 20117484 -125471804 + L1MA10 LINE L1 5985 6332 -2 22 0 0 0 chr10 20117696 20117718 -125471570 + AT_rich Low_complexity Low_complexity 1 22 0 383 293 160 13 chr10 20118377 20118533 -125470755 + MIR SINE MIR 19 176 -68 234 150 25 0 chr10 20118539 20118579 -125470709 - MER75 DNA T2_type 0 504 464 298 225 0 50 chr10 20118618 20118698 -125470590 + MIR SINE MIR 187 262 0 1487 220 74 55 chr10 20118718 20118763 -125470525 - MLT2B1 LTR ERVL -7 513 470 7815 129 32 9 chr10 20118763 20120029 -125469259 + HSMAR2 DNA Mariner 5 1299 -3 1487 220 74 55 chr10 20120029 20120456 -125468832 - MLT2B1 LTR ERVL -50 470 32 306 317 25 0 chr10 20120908 20121028 -125468260 - MIR SINE MIR 0 262 140 1800 211 44 47 chr10 20121345 20121753 -125467535 - MER74A LTR ERVL -31 527 121 225 222 19 0 chr10 20121872 20121926 -125467362 - MER74B LTR ERVL -518 104 50 22 0 0 0 chr10 20123364 20123386 -125465902 + AT_rich Low_complexity Low_complexity 1 22 0 240 331 39 78 chr10 20123970 20124124 -125465164 + L2 LINE L2 2383 2530 -784 228 241 0 0 chr10 20125030 20125088 -125464200 + CT-rich Low_complexity Low_complexity 3 60 0 1255 213 37 43 chr10 20125194 20125476 -125463812 + MER58B DNA MER1_type 19 300 -2120 2379 89 0 0 chr10 20125476 20125768 -125463520 + AluSc SINE Alu 1 292 -17 1255 213 37 43 chr10 20125768 20125809 -125463479 + MER58B DNA MER1_type 300 340 -1 412 255 136 11 chr10 20125818 20126002 -125463286 + MER3 DNA MER1_type 1 207 -2 248 234 0 0 chr10 20126178 20126225 -125463063 + L2 LINE L2 3213 3259 -13 28 0 0 0 chr10 20126719 20126747 -125462541 + AT_rich Low_complexity Low_complexity 1 28 0 1044 218 116 57 chr10 20126921 20127274 -125462014 + MLT1A2 LTR MaLR 1 374 0 669 285 141 18 chr10 20128036 20128419 -125460869 - MLT1H LTR MaLR -16 533 104 326 231 145 0 chr10 20128507 20128624 -125460664 - L1MC/D LINE L1 -2001 5807 5674 2198 101 0 64 chr10 20128638 20128965 -125460323 - AluSg SINE Alu -4 306 1 239 289 24 12 chr10 20129462 20129545 -125459743 + L2 LINE L2 3227 3310 -3 1686 179 6 28 chr10 20130599 20130918 -125458370 + AluJo SINE Alu 1 312 0 22 56 0 0 chr10 20131442 20131478 -125457810 + GC_rich Low_complexity Low_complexity 1 36 0 462 79 0 0 chr10 20131802 20131865 -125457423 + (TTCC)n Simple_repeat Simple_repeat 3 65 0 2191 75 0 11 chr10 20131867 20132148 -125457140 - AluY SINE Alu -33 278 1 1730 148 11 7 chr10 20132370 20132648 -125456640 - AluJo SINE Alu -25 287 9 294 273 81 30 chr10 20132811 20132910 -125456378 - MER5A DNA MER1_type -77 112 9 478 319 34 43 chr10 20133443 20133650 -125455638 - MIR SINE MIR -44 218 14 320 299 63 32 chr10 20133953 20134174 -125455114 - L1MC4a LINE L1 -1903 5839 5612 1217 148 30 5 chr10 20134471 20134673 -125454615 - AluSg/x SINE Alu 0 312 106 432 127 0 0 chr10 20134673 20134736 -125454552 + AluS SINE Alu 18 80 -233 352 304 42 19 chr10 20135013 20135227 -125454061 - L1MC4a LINE L1 -1109 4971 4753 833 212 54 40 chr10 20135243 20135465 -125453823 - LTR40a LTR ERVL 0 519 295 833 231 57 24 chr10 20135465 20135763 -125453525 - L1MC4a LINE L1 -3161 2919 2612 435 233 78 0 chr10 20135884 20136000 -125453288 - L1MC4a LINE L1 -4633 1628 1504 1247 184 87 3 chr10 20136015 20136314 -125452974 - L1MB2 LINE L1 0 6171 5848 1010 279 50 52 chr10 20136346 20137481 -125451807 - L1ME LINE L1 -4624 1456 332 356 287 52 46 chr10 20137532 20137706 -125451582 - L1ME LINE L1 -5846 224 50 13209 137 20 2 chr10 20137727 20139817 -125449471 - Tigger1 DNA MER2_type -1 2417 291 543 226 0 0 chr10 20139819 20139925 -125449363 + AluJb SINE Alu 192 297 -15 251 226 65 0 chr10 20139925 20139987 -125449301 - Tigger1 DNA MER2_type -2127 291 226 632 162 123 84 chr10 20139990 20140144 -125449144 + AluJo SINE Alu 71 230 -82 209 30 61 0 chr10 20140179 20140212 -125449076 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1378 157 4 8 chr10 20140212 20140442 -125448846 - Tigger1 DNA MER2_type -2189 229 1 2040 111 6 47 chr10 20140816 20141157 -125448131 + L1PB1 LINE L1 5825 6151 0 256 318 0 0 chr10 20141765 20141831 -125447457 + L2 LINE L2 3236 3301 -12 2276 125 0 0 chr10 20143167 20143479 -125445809 - AluSx SINE Alu 0 312 1 40 67 0 0 chr10 20145418 20145493 -125443795 + AT_rich Low_complexity Low_complexity 1 75 0 22 88 0 0 chr10 20146856 20146913 -125442375 + AT_rich Low_complexity Low_complexity 1 57 0 827 326 34 17 chr10 20146979 20147335 -125441953 - MLT1K LTR MaLR -85 503 142 184 315 54 117 chr10 20147522 20147608 -125441680 - L2 LINE L2 -7 3265 3175 2625 156 30 6 chr10 20147608 20148076 -125441212 + L1PA16 LINE L1 5687 6165 -1 184 315 54 117 chr10 20148076 20148322 -125440966 - L2 LINE L2 -97 3175 2954 2050 93 4 0 chr10 20148930 20149198 -125440090 + AluSg SINE Alu 41 309 -1 470 320 74 22 chr10 20149865 20150134 -125439154 - ERVL LTR ERVL -3048 2716 2434 627 245 112 65 chr10 20150139 20150417 -125438871 + ERVL LTR ERVL 3285 3575 -2189 2973 112 13 7 chr10 20150700 20151154 -125438134 - L1PA10 LINE L1 -1 6167 5711 274 210 61 99 chr10 20151276 20151457 -125437831 - L1MEc LINE L1 -4839 1557 1384 225 226 23 45 chr10 20151497 20151674 -125437614 + (TTTA)n Simple_repeat Simple_repeat 1 173 0 * 329 199 38 15 chr10 20151551 20151682 -125437606 + (TA)n Simple_repeat Simple_repeat 2 135 0 2018 120 17 7 chr10 20151770 20152070 -125437218 - AluSq SINE Alu -10 303 1 239 281 68 55 chr10 20152076 20152531 -125436757 - L1MEc LINE L1 -5026 1179 719 2074 134 0 3 chr10 20153154 20153452 -125435836 - AluSx SINE Alu -15 297 1 272 198 30 10 chr10 20154000 20154101 -125435187 + CT-rich Low_complexity Low_complexity 3 105 0 260 192 0 154 chr10 20154365 20154469 -125434819 - L2 LINE L2 -1 3271 3184 527 260 35 40 chr10 20154639 20154839 -125434449 - L1MA9 LINE L1 -49 6263 6065 2022 106 7 0 chr10 20154839 20155113 -125434175 - AluSg SINE Alu -11 299 24 1574 220 27 11 chr10 20155133 20155501 -125433787 + L1MA9 LINE L1 5710 6083 -229 260 331 69 15 chr10 20155587 20155717 -125433571 - L2 LINE L2 -178 3094 2958 318 308 0 45 chr10 20156028 20156161 -125433127 - L2 LINE L2 -839 2475 2349 288 53 0 0 chr10 20156186 20156224 -125433064 + (TG)n Simple_repeat Simple_repeat 2 39 0 198 395 122 6 chr10 20156982 20157154 -125432134 + MIR3 SINE MIR 16 207 -1 2836 3 0 0 chr10 20158911 20159217 -125430071 - AluYa5 SINE Alu -5 306 1 2168 209 63 70 chr10 20161786 20162441 -125426847 - MER82 DNA MER2_type -1 652 3 2313 78 19 29 chr10 20162944 20163251 -125426037 - AluSx SINE Alu -8 304 1 327 214 192 66 chr10 20164095 20164277 -125425011 + MLT1K LTR MaLR 376 580 -8 1864 172 0 3 chr10 20164505 20164796 -125424492 - AluSx SINE Alu -20 292 3 32 0 0 0 chr10 20164809 20164841 -125424447 + AT_rich Low_complexity Low_complexity 1 32 0 212 238 48 48 chr10 20165902 20165986 -125423302 - MIR3 SINE MIR -4 204 121 2106 129 7 7 chr10 20166059 20166368 -125422920 - AluSx SINE Alu -3 309 1 295 210 10 70 chr10 20166373 20166473 -125422815 - HAL1 LINE L1 -1 2506 2413 620 280 106 0 chr10 20166764 20167028 -125422260 - HAL1 LINE L1 -651 1856 1565 1718 216 21 5 chr10 20167049 20167438 -125421850 - MER65C LTR ERV1 0 461 67 713 333 57 34 chr10 20167439 20167857 -125421431 - HAL1 LINE L1 -1376 1131 704 1031 243 15 53 chr10 20167857 20168198 -125421090 + MLT2C1 LTR ERVL 1 328 -69 396 290 57 105 chr10 20168373 20168707 -125420581 - HAL1 LINE L1 -2167 340 23 1947 112 65 7 chr10 20168748 20169046 -125420242 - AluSx SINE Alu 0 312 1 1553 281 31 19 chr10 20170326 20170898 -125418390 - MLT1H1 LTR MaLR 0 555 1 279 322 91 50 chr10 20170909 20171108 -125418180 + MIR SINE MIR 56 262 0 2187 112 12 0 chr10 20171122 20171444 -125417844 - THE1B LTR MaLR -6 358 33 8971 108 11 39 chr10 20171444 20172889 -125416399 - THE1B-int LTR MaLR -52 1528 124 3059 47 3 3 chr10 20172890 20173272 -125416016 - L1PA5 LINE L1 -3 6151 5770 819 77 0 0 chr10 20173272 20173376 -125415912 - AluY SINE Alu -8 303 200 1326 87 19 29 chr10 20173619 20173825 -125415463 - AluY SINE Alu -107 204 1 4120 47 3 2 chr10 20173825 20174484 -125414804 - L1P2 LINE L1 -368 5786 5127 * 4918 69 0 30 chr10 20174482 20175194 -125414094 + L1P2 LINE L1 4437 5127 -1019 843 114 0 0 chr10 20175191 20175322 -125413966 - THE1B-int LTR MaLR -1449 131 1 * 2583 110 6 6 chr10 20175322 20175686 -125413602 - THE1B LTR MaLR 0 364 1 775 274 90 0 chr10 20175948 20176182 -125413106 - MIR SINE MIR 0 262 8 1935 81 25 7 chr10 20176343 20176627 -125412661 + L1MA1 LINE L1 6014 6302 0 21 57 0 0 chr10 20176985 20177020 -125412268 + AT_rich Low_complexity Low_complexity 1 35 0 35528 38 25 2 chr10 20177149 20182600 -125406688 + L1PA3 LINE L1 567 6151 -4 25 0 0 0 chr10 20182600 20182625 -125406663 + AT_rich Low_complexity Low_complexity 1 25 0 288 279 29 0 chr10 20182859 20182963 -125406325 - L1ME LINE L1 -5961 109 3 647 192 47 131 chr10 20182984 20183204 -125406084 - L1MA10 LINE L1 -1 6333 6143 2240 118 6 6 chr10 20183204 20183517 -125405771 + AluSp SINE Alu 1 313 0 647 192 47 131 chr10 20183517 20183593 -125405695 - L1MA10 LINE L1 -191 6143 6062 752 163 20 0 chr10 20183710 20183857 -125405431 - L1MB1 LINE L1 -119 6049 5900 * 1203 183 28 16 chr10 20183854 20184136 -125405152 + L1MB1 LINE L1 5643 5933 -233 25 31 0 0 chr10 20184195 20184227 -125405061 + AT_rich Low_complexity Low_complexity 1 32 0 1584 206 0 0 chr10 20184228 20184515 -125404773 - AluJb SINE Alu -25 287 1 234 0 0 0 chr10 20184754 20184780 -125404508 + (TG)n Simple_repeat Simple_repeat 2 27 0 239 328 58 32 chr10 20185091 20185280 -125404008 - MLT1K LTR MaLR -18 570 377 404 140 11 0 chr10 20185910 20186003 -125403285 + (TCTA)n Simple_repeat Simple_repeat 1 94 0 596 204 0 0 chr10 20186021 20186129 -125403159 + FLAM_C SINE Alu 24 131 -12 430 270 6 0 chr10 20186134 20186312 -125402976 + (TA)n Simple_repeat Simple_repeat 2 180 0 200 211 0 53 chr10 20186422 20186479 -125402809 + (TCTA)n Simple_repeat Simple_repeat 1 54 0 21 36 0 0 chr10 20187311 20187339 -125401949 + AT_rich Low_complexity Low_complexity 1 28 0 225 375 27 43 chr10 20187762 20187870 -125401418 + MIR SINE MIR 45 150 -112 2194 120 0 0 chr10 20187870 20188161 -125401127 + AluSx SINE Alu 5 295 -17 225 375 27 43 chr10 20188161 20188261 -125401027 + MIR SINE MIR 150 250 -12 5435 40 0 0 chr10 20188441 20189124 -125400164 + L1PA5 LINE L1 5494 6176 0 405 226 274 0 chr10 20190340 20190486 -125398802 - MER5A DNA MER1_type -3 186 1 438 216 138 52 chr10 20190543 20190775 -125398513 - MLT1L LTR MaLR -40 575 324 222 118 0 0 chr10 20190980 20191014 -125398274 + (TTCC)n Simple_repeat Simple_repeat 1 34 0 1084 110 51 11 chr10 20191015 20191224 -125398064 - MLT2A2 LTR ERVL 0 453 292 959 299 108 47 chr10 20191742 20192327 -125396961 + L2 LINE L2 2372 3083 -230 2678 152 34 13 chr10 20192327 20192801 -125396487 + LTR45B LTR ERV1 3 486 -3 959 299 108 47 chr10 20192801 20193047 -125396241 + L2 LINE L2 3083 3313 0 758 191 24 175 chr10 20193225 20193383 -125395905 - L1ME2 LINE L1 0 6444 6264 4202 149 29 27 chr10 20193383 20194166 -125395122 - LTR1 LTR ERV1 0 785 1 758 191 24 175 chr10 20194166 20194444 -125394844 - L1ME2 LINE L1 -180 6264 6093 2487 54 0 0 chr10 20194444 20194738 -125394550 - AluY SINE Alu -17 294 1 758 191 24 175 chr10 20194738 20194808 -125394480 - L1ME2 LINE L1 -351 6093 6014 323 187 40 0 chr10 20194802 20194877 -125394411 - L1M4 LINE L1 -3400 2746 2669 * 632 231 65 15 chr10 20194863 20195835 -125393453 - L1ME2 LINE L1 -434 6010 4868 339 192 50 20 chr10 20195831 20195930 -125393358 - L1ME2 LINE L1 -3400 3026 2925 * 239 182 117 13 chr10 20195999 20196034 -125393254 - L1ME2 LINE L1 -5543 883 853 486 0 0 0 chr10 20196034 20196088 -125393200 + (TTTA)n Simple_repeat Simple_repeat 3 56 0 239 182 117 13 chr10 20196088 20196129 -125393159 - L1ME2 LINE L1 -5573 853 799 292 140 18 18 chr10 20196130 20196187 -125393101 + LTR45 LTR ERV1 469 525 0 1298 207 17 20 chr10 20196195 20196495 -125392793 - L1ME2 LINE L1 -5628 798 500 752 209 87 6 chr10 20196492 20196664 -125392624 - L1ME2 LINE L1 -6220 206 21 * 591 258 52 104 chr10 20196665 20197753 -125391535 - L1ME LINE L1 -4958 1122 102 3756 175 43 7 chr10 20197769 20198449 -125390839 + MER44D DNA MER2_type 1 704 -1 1004 215 54 90 chr10 20198462 20198830 -125390458 + MLT1C LTR MaLR 113 467 0 423 174 0 0 chr10 20198830 20198916 -125390372 + (CA)n Simple_repeat Simple_repeat 1 86 0 880 218 35 123 chr10 20199464 20199864 -125389424 + MLT1A1 LTR MaLR 1 365 0 192 333 35 0 chr10 20200148 20200235 -125389053 - L2 LINE L2 -234 3079 2990 229 313 40 10 chr10 20200341 20200440 -125388848 - L2 LINE L2 -517 2797 2696 719 123 0 8 chr10 20200440 20200570 -125388718 - L1P LINE L1 -1440 4706 4578 2819 77 0 0 chr10 20200570 20200928 -125388360 + L1PA7 LINE L1 5785 6147 -7 445 165 44 0 chr10 20200946 20201037 -125388251 - L1MA7 LINE L1 -370 5942 5848 1284 141 55 108 chr10 20201038 20201400 -125387888 + L1MA7 LINE L1 5939 6281 -10 1315 280 32 62 chr10 20201975 20202510 -125386778 - LTR40a LTR ERVL 0 519 1 504 317 115 16 chr10 20203496 20203862 -125385426 - L2 LINE L2 0 3313 2912 294 217 117 50 chr10 20203910 20204030 -125385258 - MIR SINE MIR -46 216 89 1496 203 35 17 chr10 20204180 20204525 -125384763 - MLT1A2 LTR MaLR -20 354 4 383 340 151 28 chr10 20204688 20204979 -125384309 + L2 LINE L2 2946 3272 0 294 206 32 0 chr10 20204978 20205041 -125384247 + MIR SINE MIR 86 150 -112 * 2457 40 3 3 chr10 20205748 20206044 -125383244 - AluYa5 SINE Alu -15 296 1 524 208 0 0 chr10 20206217 20206313 -125382975 - MLT1E LTR MaLR -458 135 40 574 187 55 55 chr10 20206362 20206546 -125382742 + L1MA10 LINE L1 5991 6332 -2 22 0 0 0 chr10 20206758 20206780 -125382508 + AT_rich Low_complexity Low_complexity 1 22 0 369 301 160 13 chr10 20207439 20207595 -125381693 + MIR SINE MIR 19 176 -68 914 255 89 30 chr10 20207802 20208360 -125380928 - HAL1b LINE L1 -424 2083 399 241 207 0 17 chr10 20208385 20208443 -125380845 + (TA)n Simple_repeat Simple_repeat 1 57 0 1000 180 86 66 chr10 20208446 20208840 -125380448 - L1MC4 LINE L1 0 8042 7641 818 219 59 83 chr10 20208929 20209454 -125379834 - HAL1 LINE L1 -1144 1363 850 603 303 98 94 chr10 20209440 20209951 -125379337 - LTR33 LTR ERVL -8 513 1 * 248 317 37 0 chr10 20209951 20210033 -125379255 - HAL1 LINE L1 -1635 872 788 1619 188 14 10 chr10 20210176 20210468 -125378820 - AluJo SINE Alu -14 298 6 320 269 23 85 chr10 20210573 20210703 -125378585 - HAL1 LINE L1 -2295 212 91 212 260 27 27 chr10 20213859 20213932 -125375356 + MIR SINE MIR 75 147 -61 29 47 0 0 chr10 20214777 20214820 -125374468 + AT_rich Low_complexity Low_complexity 1 43 0 26456 98 16 5 chr10 20214941 20219656 -125369632 - L1PA7 LINE L1 0 6154 1395 1879 214 5 22 chr10 20219645 20220056 -125369232 - L1MCb LINE L1 -5128 917 514 * 21 0 0 0 chr10 20220243 20220264 -125369024 + AT_rich Low_complexity Low_complexity 1 21 0 231 337 166 5 chr10 20220714 20220907 -125368381 + L2 LINE L2 2616 2839 -475 257 287 191 0 chr10 20221175 20221290 -125367998 + L2 LINE L2 3134 3270 -2 348 117 17 0 chr10 20221396 20221456 -125367832 - L1MB5 LINE L1 -7 6167 6107 1398 192 27 69 chr10 20221488 20221863 -125367425 - L1MB5 LINE L1 -33 6141 5783 402 143 33 0 chr10 20222450 20222541 -125366747 + (TA)n Simple_repeat Simple_repeat 2 95 0 317 148 45 40 chr10 20222600 20222776 -125366512 + (TA)n Simple_repeat Simple_repeat 1 177 0 456 308 0 0 chr10 20223102 20223222 -125366066 + MER58B DNA MER1_type 222 341 0 180 111 0 0 chr10 20225145 20225172 -125364116 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 261 0 0 0 chr10 20225922 20225951 -125363337 + (TA)n Simple_repeat Simple_repeat 2 30 0 315 0 0 0 chr10 20225951 20225986 -125363302 + (T)n Simple_repeat Simple_repeat 1 35 0 1657 156 0 53 chr10 20226086 20226368 -125362920 - AluJo SINE Alu -45 267 1 445 268 168 6 chr10 20226374 20226553 -125362735 + L2 LINE L2 2004 2211 -1103 24 32 0 0 chr10 20227519 20227550 -125361738 + AT_rich Low_complexity Low_complexity 1 31 0 756 263 84 5 chr10 20228107 20228373 -125360915 - MER110A LTR ERV1 0 468 213 1973 102 0 7 chr10 20228772 20229057 -125360231 - L1PA8 LINE L1 -3 6169 5887 1877 47 0 0 chr10 20229057 20229290 -125359998 + L1PA8 LINE L1 5653 5885 -287 492 328 110 60 chr10 20229342 20229749 -125359539 - L3 LINE CR1 -166 1411 971 2035 129 17 0 chr10 20229749 20230036 -125359252 + AluSx SINE Alu 6 297 -15 492 328 110 60 chr10 20230036 20230147 -125359141 - L3 LINE CR1 -606 971 867 447 313 95 29 chr10 20230154 20230397 -125358891 + MIR SINE MIR 3 261 -1 613 294 14 32 chr10 20230678 20230896 -125358392 - MER58C DNA MER1_type 0 215 2 2510 55 3 3 chr10 20231354 20231661 -125357627 + AluY SINE Alu 1 307 -4 23 54 0 0 chr10 20231712 20231749 -125357539 + AT_rich Low_complexity Low_complexity 1 37 0 1980 124 0 17 chr10 20232403 20232701 -125356587 + AluSc SINE Alu 1 293 -16 2389 43 43 16 chr10 20233879 20234182 -125355106 - AluY SINE Alu 0 311 1 387 77 0 0 chr10 20234370 20234422 -125354866 - Alu SINE Alu -9 293 242 589 280 16 54 chr10 20234461 20234647 -125354641 + MIR SINE MIR 18 196 -66 2196 83 4 0 chr10 20234698 20234976 -125354312 - AluY SINE Alu -16 295 17 5384 207 49 24 chr10 20235197 20237709 -125351579 - L1MC1 LINE L1 0 6613 4027 1545 210 64 69 chr10 20237731 20238102 -125351186 - L1MC1 LINE L1 -3915 2692 2320 372 59 0 0 chr10 20238102 20238153 -125351135 + (TA)n Simple_repeat Simple_repeat 2 52 0 1545 210 64 69 chr10 20238153 20238976 -125350312 - L1MC1 LINE L1 -4287 2320 1461 854 161 0 0 chr10 20239017 20239147 -125350141 - FLAM_C SINE Alu -3 130 1 2230 108 6 0 chr10 20239928 20240253 -125349035 - pTR5 LTR ERV1 -2046 392 66 313 245 31 20 chr10 20240253 20240351 -125348937 - LTR30 LTR ERV1 -80 642 544 2252 211 43 103 chr10 20240355 20241216 -125348072 - pTR5 LTR ERV1 -417 2021 743 212 367 41 10 chr10 20241531 20241629 -125347659 + L2 LINE L2 3171 3271 -1 30 0 0 0 chr10 20241844 20241874 -125347414 + AT_rich Low_complexity Low_complexity 1 30 0 1952 108 0 7 chr10 20241943 20242212 -125347076 - AluSc SINE Alu -8 301 35 188 263 0 0 chr10 20242318 20242356 -125346932 - L2 LINE L2 -11 3302 3265 21 0 0 0 chr10 20242417 20242438 -125346850 + AT_rich Low_complexity Low_complexity 1 21 0 1591 194 16 68 chr10 20243502 20243883 -125345405 + MLT1A2 LTR MaLR 1 361 -13 346 295 209 34 chr10 20243921 20244270 -125345018 + LTR16C LTR ERVL 73 482 -9 1658 233 7 55 chr10 20244498 20244757 -125344531 + MER57B LTR ERV1 1 230 -204 2180 132 0 0 chr10 20244757 20245068 -125344220 - AluSx SINE Alu -1 311 1 1658 233 7 55 chr10 20245068 20245264 -125344024 + MER57B LTR ERV1 230 434 0 454 335 25 25 chr10 20245268 20245465 -125343823 + MER57B-int LTR ERV1 3 199 -7338 201 292 0 83 chr10 20245551 20245647 -125343641 - MER5A DNA MER1_type -42 147 60 511 174 0 0 chr10 20246429 20246515 -125342773 + AluSc SINE Alu 210 295 -14 296 306 99 0 chr10 20248144 20248255 -125341033 + L2 LINE L2 3138 3259 -13 210 118 0 0 chr10 20249517 20249551 -125339737 + (T)n Simple_repeat Simple_repeat 1 34 0 1096 173 5 0 chr10 20249598 20249783 -125339505 - MER50 LTR ERV1 -23 711 526 2171 143 42 20 chr10 20250529 20250885 -125338403 - THE1B LTR MaLR 0 364 1 185 246 15 0 chr10 20251167 20251232 -125338056 + (CATA)n Simple_repeat Simple_repeat 3 68 0 987 99 35 0 chr10 20251814 20251955 -125337333 + L1PA11 LINE L1 6025 6170 -4 190 107 0 0 chr10 20252154 20252182 -125337106 - MIR SINE MIR -122 140 113 193 288 88 38 chr10 20252715 20252795 -125336493 + L2 LINE L2 3186 3269 -3 312 362 38 9 chr10 20253028 20253133 -125336155 - L2 LINE L2 0 3272 3165 406 288 135 22 chr10 20253254 20253483 -125335805 - MLT1K LTR MaLR -69 519 265 1294 302 57 28 chr10 20253868 20254836 -125334452 + L1M4 LINE L1 4077 5092 -1065 2187 116 0 13 chr10 20254836 20255137 -125334151 - AluSx SINE Alu -13 299 3 1294 302 57 28 chr10 20255137 20255414 -125333874 + L1M4 LINE L1 5092 5360 -797 401 242 193 53 chr10 20255423 20255744 -125333544 + L1M4 LINE L1 5465 5835 -339 3705 183 22 62 chr10 20256165 20257009 -125332279 + L1PA16 LINE L1 5341 6151 -15 2329 113 0 0 chr10 20257553 20257853 -125331435 - AluSx SINE Alu -10 302 3 239 313 111 46 chr10 20257935 20258242 -125331046 + L1MEd LINE L1 59 385 -5734 21355 65 5 7 chr10 20258276 20263268 -125326020 + L1PA5 LINE L1 1192 6154 0 1163 146 20 185 chr10 20263675 20264080 -125325208 + MER44D DNA MER2_type 1 608 -1 766 222 71 10 chr10 20264086 20264284 -125325004 + MER63A DNA MER1_type 1 210 0 1115 153 6 0 chr10 20314886 20315056 -125274232 + AluSg/x SINE Alu 134 304 -8 448 222 115 127 chr10 20315062 20315270 -125274018 - MER66A LTR ERV1 -77 401 295 2394 90 3 0 chr10 20315270 20315582 -125273706 + AluSp SINE Alu 1 313 0 448 222 115 127 chr10 20315582 20315779 -125273509 - MER66A LTR ERV1 -183 295 97 1223 178 89 22 chr10 20316305 20316575 -125272713 + MER2 DNA MER2_type 58 345 0 203 348 62 53 chr10 20316579 20316761 -125272527 - MIR SINE MIR -56 206 27 270 229 0 0 chr10 20317150 20317220 -125272068 + CT-rich Low_complexity Low_complexity 1 70 0 293 329 90 18 chr10 20317907 20318074 -125271214 + MIR SINE MIR 51 229 -33 402 205 259 9 chr10 20318697 20318809 -125270479 + MIR SINE MIR 31 170 -92 1230 278 109 54 chr10 20319644 20320433 -125268855 - L1ME LINE L1 -4485 1776 1032 1715 170 109 0 chr10 20320433 20320763 -125268525 - MER47A DNA MER2_type 0 366 1 1230 278 109 54 chr10 20320763 20321101 -125268187 - L1ME LINE L1 -5229 1032 714 2079 134 3 10 chr10 20321101 20321415 -125267873 - AluSx SINE Alu 0 312 1 1230 278 109 54 chr10 20321415 20321774 -125267514 - L1ME LINE L1 -5547 714 154 307 333 45 18 chr10 20322176 20322287 -125267001 - L2 LINE L2 -20 3252 3139 1009 261 46 15 chr10 20322484 20322813 -125266475 - MER58B DNA MER1_type 0 341 3 2031 136 0 10 chr10 20323184 20323479 -125265809 - AluSx SINE Alu -20 292 1 33 56 0 0 chr10 20323509 20323563 -125265725 + AT_rich Low_complexity Low_complexity 1 54 0 1901 141 60 20 chr10 20323672 20324019 -125265269 + MER46B DNA MER2_type 1 236 0 1891 220 43 77 chr10 20325477 20326122 -125263166 + MLT1E2 LTR MaLR 1 618 -8 363 73 44 0 chr10 20326511 20326579 -125262709 + (TCTA)n Simple_repeat Simple_repeat 4 74 0 2689 229 54 25 chr10 20326593 20327431 -125261857 - L1M4 LINE L1 -1006 5638 4777 255 338 21 55 chr10 20327996 20328141 -125261147 + MIR SINE MIR 17 156 -106 241 326 11 0 chr10 20328275 20328364 -125260924 + MIR SINE MIR 172 261 -1 25 31 0 0 chr10 20328371 20328403 -125260885 + AT_rich Low_complexity Low_complexity 1 32 0 493 137 0 49 chr10 20328410 20328512 -125260776 - L1PA11 LINE L1 -2 6172 6076 5049 243 59 15 chr10 20328520 20330024 -125259264 - L1M4 LINE L1 -2192 4452 2831 7198 159 12 1 chr10 20330024 20332056 -125257232 + L1PA11 LINE L1 4130 6174 0 5049 243 59 15 chr10 20332056 20332627 -125256661 - L1M4 LINE L1 -3813 2831 2287 3846 254 94 21 chr10 20332680 20333090 -125256198 - L1M4 LINE L1 -5237 1305 926 1724 184 45 28 chr10 20333090 20333449 -125255839 - MLT1A1 LTR MaLR 0 365 1 3846 254 94 21 chr10 20333449 20334253 -125255035 - L1M4 LINE L1 -5616 926 2 3190 119 92 0 chr10 20336930 20337461 -125251827 - LTR19B LTR ERV1 0 580 1 1769 106 8 0 chr10 20337821 20338085 -125251203 - L1MA2 LINE L1 0 6304 6039 415 198 104 10 chr10 20338532 20338628 -125250660 + MER81 DNA DNA 10 114 0 186 103 0 0 chr10 20338793 20338822 -125250466 + (T)n Simple_repeat Simple_repeat 1 29 0 22 0 0 0 chr10 20338828 20338850 -125250438 + AT_rich Low_complexity Low_complexity 1 22 0 42809 31 21 1 chr10 20338850 20344883 -125244405 - L1HS LINE L1 0 6155 1 403 324 28 16 chr10 20347320 20347502 -125241786 - MIR SINE MIR 0 262 79 3085 140 53 2 chr10 20347861 20348388 -125240900 + MER41C LTR ERV1 1 554 0 2067 191 35 116 chr10 20348941 20349607 -125239681 - LTR9 LTR ERV1 0 612 1 27 22 0 22 chr10 20350014 20350028 -125239260 + AT_rich Low_complexity Low_complexity 1 14 -30 1991 112 17 14 chr10 20350028 20350315 -125238973 - AluSx SINE Alu -14 298 11 27 22 0 22 chr10 20350315 20350345 -125238943 + AT_rich Low_complexity Low_complexity 14 44 0 566 277 114 20 chr10 20351309 20351511 -125237777 - MIR SINE MIR -10 252 32 184 135 68 0 chr10 20351511 20351585 -125237703 + (TA)n Simple_repeat Simple_repeat 1 79 0 29 28 0 0 chr10 20351604 20351640 -125237648 + AT_rich Low_complexity Low_complexity 1 36 0 235 129 45 52 chr10 20351671 20351826 -125237462 + (TATAA)n Simple_repeat Simple_repeat 5 158 0 422 133 66 12 chr10 20351869 20352035 -125237253 + (TA)n Simple_repeat Simple_repeat 2 176 0 24 0 0 0 chr10 20352069 20352093 -125237195 + AT_rich Low_complexity Low_complexity 1 24 0 342 208 60 6 chr10 20352112 20352311 -125236977 + (TA)n Simple_repeat Simple_repeat 1 209 0 272 135 27 36 chr10 20352314 20352425 -125236863 + (TATAA)n Simple_repeat Simple_repeat 1 110 0 1994 128 3 3 chr10 20353115 20353413 -125235875 - AluSx SINE Alu -14 298 1 2266 78 31 0 chr10 20353544 20353838 -125235450 + AluY SINE Alu 1 303 -8 216 0 0 0 chr10 20354209 20354233 -125235055 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 21 0 0 0 chr10 20354785 20354806 -125234482 + AT_rich Low_complexity Low_complexity 1 21 0 4770 175 50 29 chr10 20355151 20356300 -125232988 - L1MA6 LINE L1 0 7321 6153 359 36 55 0 chr10 20356339 20356394 -125232894 - L1MA4A LINE L1 -21 6282 6225 640 154 0 26 chr10 20356395 20356512 -125232776 - L1MA4A LINE L1 -275 6028 5915 * 5411 217 45 12 chr10 20356507 20358164 -125231124 - L1MA6 LINE L1 -2557 4610 2899 2520 234 37 49 chr10 20358191 20358660 -125230628 - L1MA6 LINE L1 -4521 2647 2174 2846 9 0 9 chr10 20358660 20358981 -125230307 - AluYb8 SINE Alu 0 318 1 2520 234 37 49 chr10 20358981 20359515 -125229773 - L1MA6 LINE L1 -4994 2174 1696 1736 340 8 10 chr10 20359892 20360490 -125228798 - L1MA6 LINE L1 -6569 599 3 337 385 117 15 chr10 20361604 20362066 -125227222 - L2 LINE L2 -2513 801 293 22 0 0 0 chr10 20362414 20362436 -125226852 + AT_rich Low_complexity Low_complexity 1 22 0 195 186 0 0 chr10 20363699 20363742 -125225546 + CT-rich Low_complexity Low_complexity 3 45 0 236 344 11 11 chr10 20363749 20363842 -125225446 + C-rich Low_complexity Low_complexity 2 94 0 233 253 0 12 chr10 20363842 20363925 -125225363 + CT-rich Low_complexity Low_complexity 2 83 0 465 34 0 0 chr10 20364057 20364116 -125225172 + (CA)n Simple_repeat Simple_repeat 2 60 0 1610 134 71 0 chr10 20364656 20364895 -125224393 + AluSx SINE Alu 38 293 -19 1011 235 4 28 chr10 20364924 20364974 -125224314 + MER74A LTR ERVL 194 244 -314 1776 207 24 3 chr10 20364974 20365356 -125223932 - MLT1B LTR MaLR 0 390 1 1011 235 4 28 chr10 20365356 20365552 -125223736 + MER74A LTR ERVL 244 434 -124 594 112 10 10 chr10 20365594 20365692 -125223596 + L1PA13 LINE L1 6053 6150 -13 1784 119 0 0 chr10 20365919 20366163 -125223125 + AluSg SINE Alu 60 303 -7 2351 95 0 19 chr10 20367071 20367386 -125221902 + AluSx SINE Alu 1 309 -3 606 295 48 51 chr10 20368133 20368469 -125220819 - L2 LINE L2 0 3313 2979 2879 141 50 28 chr10 20368475 20369066 -125220222 - MER4B LTR ERV1 0 779 9 2386 240 99 180 chr10 20369130 20369542 -125219746 - L2 LINE L2 -518 2796 2352 5181 84 13 0 chr10 20369542 20370223 -125219065 - LTR8 LTR ERV1 -1 690 1 2386 240 99 180 chr10 20370223 20370719 -125218569 - L2 LINE L2 -962 2352 1818 1489 153 57 82 chr10 20370719 20371008 -125218280 + L1MB5 LINE L1 5817 6112 -62 2174 120 3 0 chr10 20371008 20371308 -125217980 - AluSq SINE Alu -12 301 1 2202 101 14 0 chr10 20371308 20371604 -125217684 - AluSx SINE Alu -12 300 1 1489 153 57 82 chr10 20371604 20371680 -125217608 + L1MB5 LINE L1 6110 6174 0 2386 240 99 180 chr10 20371680 20372998 -125216290 - L2 LINE L2 -1496 1818 418 2095 106 0 33 chr10 20372998 20373300 -125215988 - AluSx SINE Alu -20 292 1 2386 240 99 180 chr10 20373300 20373360 -125215928 - L2 LINE L2 -2896 418 355 222 37 0 0 chr10 20373563 20373590 -125215698 + (TG)n Simple_repeat Simple_repeat 1 27 0 1663 177 3 43 chr10 20374190 20374489 -125214799 + AluJo SINE Alu 3 289 -23 2262 129 0 0 chr10 20375200 20375510 -125213778 - AluSx SINE Alu -2 310 1 1101 128 0 0 chr10 20375534 20375714 -125213574 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 219 263 0 0 chr10 20375762 20375819 -125213469 + T-rich Low_complexity Low_complexity 1 57 0 30 0 0 0 chr10 20376962 20376992 -125212296 + AT_rich Low_complexity Low_complexity 1 30 0 3239 75 20 2 chr10 20377027 20377469 -125211819 - L1PA10 LINE L1 -11 6157 5708 989 236 62 22 chr10 20377517 20377792 -125211496 - L1MCb LINE L1 -5047 998 713 2661 231 147 14 chr10 20379248 20379988 -125209300 - MER21B LTR ERV1 -19 844 6 259 220 29 18 chr10 20379992 20380281 -125209007 + (TA)n Simple_repeat Simple_repeat 1 292 0 291 162 30 0 chr10 20380925 20381024 -125208264 + (TATG)n Simple_repeat Simple_repeat 3 104 0 24 0 0 0 chr10 20382063 20382087 -125207201 + AT_rich Low_complexity Low_complexity 1 24 0 1418 118 0 14 chr10 20383194 20383405 -125205883 - AluSg/x SINE Alu -6 306 99 440 66 0 165 chr10 20384694 20384785 -125204503 + MADE1 DNA Mariner 1 76 -4 21 0 0 0 chr10 20385318 20385339 -125203949 + AT_rich Low_complexity Low_complexity 1 21 0 1911 154 7 3 chr10 20385425 20385718 -125203570 - AluSx SINE Alu -18 294 1 931 185 46 0 chr10 20385826 20386021 -125203267 + MER3 DNA MER1_type 2 205 -4 402 50 33 0 chr10 20386605 20386665 -125202623 - L1PA6 LINE L1 0 6154 6093 2200 109 0 13 chr10 20387517 20387829 -125201459 + AluSg SINE Alu 1 308 -2 2204 122 3 0 chr10 20388616 20388911 -125200377 - AluSx SINE Alu -14 298 3 479 238 182 0 chr10 20389937 20390080 -125199208 + MER5A DNA MER1_type 21 189 0 23 0 0 0 chr10 20390227 20390250 -125199038 + AT_rich Low_complexity Low_complexity 1 23 0 2938 169 44 11 chr10 20390627 20390720 -125198568 + L1MA9 LINE L1 5676 5765 -547 393 22 0 0 chr10 20390720 20390766 -125198522 + (TG)n Simple_repeat Simple_repeat 2 47 0 2938 169 44 11 chr10 20390766 20391289 -125197999 + L1MA9 LINE L1 5765 6312 0 1888 147 32 0 chr10 20391414 20391755 -125197533 + L1MB3 LINE L1 5828 6179 -4 2626 52 0 0 chr10 20392084 20392391 -125196897 + AluY SINE Alu 1 307 -4 323 292 25 42 chr10 20393697 20393817 -125195471 + MER94 DNA DNA 17 134 0 427 214 141 32 chr10 20394399 20394557 -125194731 + MER8 DNA MER2_type 50 345 0 358 326 144 5 chr10 20394890 20395077 -125194211 + MIR SINE MIR 22 234 -28 1959 146 0 32 chr10 20395555 20395871 -125193417 + AluSx SINE Alu 1 306 -6 215 345 35 0 chr10 20396902 20396989 -125192299 - L3b LINE CR1 -275 1308 1219 740 165 16 8 chr10 20397223 20397350 -125191938 - FLAM_C SINE Alu -14 129 2 367 295 93 0 chr10 20398539 20398668 -125190620 + MIR SINE MIR 115 255 -7 198 0 0 0 chr10 20398982 20399004 -125190284 + (TA)n Simple_repeat Simple_repeat 2 23 0 525 58 0 0 chr10 20399255 20399324 -125189964 + (TCTA)n Simple_repeat Simple_repeat 1 69 0 1262 140 0 39 chr10 20399326 20399533 -125189755 - AluSg/x SINE Alu -29 283 85 1732 239 27 23 chr10 20399871 20400389 -125188899 - L1ME1 LINE L1 -2 6164 5645 216 0 0 0 chr10 20400410 20400434 -125188854 + (TTTTTG)n Simple_repeat Simple_repeat 3 26 0 1011 294 21 50 chr10 20400434 20400853 -125188435 - L1MEc LINE L1 -5834 562 156 350 356 97 36 chr10 20400978 20401368 -125187920 - L1MC/D LINE L1 -1985 5823 5410 849 274 109 33 chr10 20401395 20402062 -125187226 - L1MC/D LINE L1 -1634 4512 3795 664 330 68 57 chr10 20402500 20403627 -125185661 - L1M4 LINE L1 -1461 4685 3540 1472 186 100 4 chr10 20403627 20403907 -125185381 + AluJo SINE Alu 1 307 -5 664 330 68 57 chr10 20403907 20404043 -125185245 - L1M4 LINE L1 -2606 3540 3407 269 291 146 0 chr10 20405819 20405929 -125183359 + MIR SINE MIR 8 133 -129 184 283 87 0 chr10 20406028 20406074 -125183214 + L2 LINE L2 3210 3259 -13 189 147 0 0 chr10 20406478 20406512 -125182776 + (TTTTC)n Simple_repeat Simple_repeat 1 34 0 2001 88 92 3 chr10 20407454 20407738 -125181550 - AluY SINE Alu 0 311 3 299 352 48 16 chr10 20408822 20408947 -125180341 - L2 LINE L2 -8 3264 3136 180 125 0 0 chr10 20409416 20409448 -125179840 + (TG)n Simple_repeat Simple_repeat 1 32 0 217 219 0 0 chr10 20409831 20409872 -125179416 + GA-rich Low_complexity Low_complexity 3 43 0 33 90 0 0 chr10 20410059 20410148 -125179140 + AT_rich Low_complexity Low_complexity 1 89 0 6661 27 0 0 chr10 20410371 20411174 -125178114 - L1P LINE L1 -2210 3936 3134 4785 9 0 0 chr10 20411170 20411709 -125177579 + L1HS LINE L1 5616 6154 -1 * 258 116 0 0 chr10 20411723 20411766 -125177522 + (A)n Simple_repeat Simple_repeat 1 43 0 604 207 58 46 chr10 20411836 20411941 -125177347 + MER3 DNA MER1_type 1 64 -98 2104 108 0 4 chr10 20411941 20412265 -125177023 + AluSc SINE Alu 1 323 0 604 207 58 46 chr10 20412265 20412332 -125176956 + MER3 DNA MER1_type 64 129 -33 200 167 21 0 chr10 20412466 20412514 -125176774 + CT-rich Low_complexity Low_complexity 2 50 0 4879 106 9 36 chr10 20412768 20413043 -125176245 + L1PA14 LINE L1 5403 5684 -477 1840 165 0 22 chr10 20413043 20413359 -125175929 + AluJb SINE Alu 1 309 -3 4879 106 9 36 chr10 20413359 20413863 -125175425 + L1PA14 LINE L1 5684 6161 0 21 36 0 0 chr10 20414613 20414641 -125174647 + AT_rich Low_complexity Low_complexity 1 28 0 267 259 0 0 chr10 20414871 20414929 -125174359 + L2 LINE L2 3213 3270 -2 216 0 0 0 chr10 20415436 20415460 -125173828 + (TA)n Simple_repeat Simple_repeat 2 25 0 1315 113 0 21 chr10 20415459 20415695 -125173593 - AluSp SINE Alu 0 335 104 489 67 0 0 chr10 20415695 20415755 -125173533 + AluS SINE Alu 19 78 -235 2424 138 23 9 chr10 20416479 20416914 -125172374 + L1MA4 LINE L1 5853 6293 -7 307 306 88 16 chr10 20417034 20417210 -125172078 + MIR SINE MIR 3 192 -70 191 296 197 38 chr10 20417210 20417271 -125172017 + MIR SINE MIR 1 51 -211 2101 126 0 0 chr10 20417271 20417572 -125171716 + AluY SINE Alu 1 301 -10 191 296 197 38 chr10 20417572 20417642 -125171646 + MIR SINE MIR 51 153 -109 276 225 28 14 chr10 20418106 20418177 -125171111 + MIR SINE MIR 159 230 -32 201 265 103 0 chr10 20418191 20418259 -125171029 + L2 LINE L2 3226 3300 -13 476 318 7 0 chr10 20419343 20419491 -125169797 + MER46C DNA MER2_type 190 338 0 196 329 0 76 chr10 20420100 20420179 -125169109 + L3b LINE CR1 1500 1572 -11 306 285 225 7 chr10 20420946 20421097 -125168191 + MIR SINE MIR 73 256 -6 23 33 0 0 chr10 20421605 20421635 -125167653 + AT_rich Low_complexity Low_complexity 1 30 0 231 235 47 24 chr10 20421635 20421720 -125167568 - L1MC4 LINE L1 -1339 6703 6617 225 262 71 0 chr10 20421651 20421735 -125167553 + L1MC4 LINE L1 6614 6703 -1339 * 279 293 0 0 chr10 20421740 20421863 -125167425 + (TA)n Simple_repeat Simple_repeat 1 123 0 234 176 78 0 chr10 20421863 20421914 -125167374 + L1MC4 LINE L1 6648 6702 -1340 362 115 11 35 chr10 20421916 20422003 -125167285 + (TA)n Simple_repeat Simple_repeat 1 85 0 330 193 108 0 chr10 20422013 20422096 -125167192 - L1MC4 LINE L1 -1339 6703 6612 537 98 9 70 chr10 20422100 20422337 -125166951 + (TA)n Simple_repeat Simple_repeat 1 222 0 226 207 49 0 chr10 20422338 20422420 -125166868 - L1MC4 LINE L1 -1341 6701 6616 235 333 42 31 chr10 20423550 20423742 -125165546 - L1MC/D LINE L1 -494 5748 5555 1636 216 63 24 chr10 20424079 20424504 -125164784 - MER39 LTR ERV1 0 707 266 240 297 14 14 chr10 20424516 20424590 -125164698 - MER34C LTR ERV1 -506 79 6 188 182 23 0 chr10 20424719 20424763 -125164525 + CT-rich Low_complexity Low_complexity 2 46 0 235 170 38 0 chr10 20424933 20424986 -125164302 + (TATG)n Simple_repeat Simple_repeat 3 57 0 180 0 0 0 chr10 20425657 20425677 -125163611 + (TA)n Simple_repeat Simple_repeat 2 21 0 34 24 0 0 chr10 20425767 20425808 -125163480 + AT_rich Low_complexity Low_complexity 1 41 0 2844 7 0 0 chr10 20426560 20426867 -125162421 - AluYb8 SINE Alu -11 307 1 645 199 0 0 chr10 20426971 20427122 -125162166 + (TG)n Simple_repeat Simple_repeat 1 151 0 2171 87 3 13 chr10 20427188 20427488 -125161800 + AluY SINE Alu 1 297 -14 1058 116 6 29 chr10 20427650 20427823 -125161465 - MER39 LTR ERV1 0 707 539 1470 198 7 10 chr10 20427882 20428170 -125161118 - MER39 LTR ERV1 -164 543 257 309 197 169 0 chr10 20428144 20428215 -125161073 - MER39 LTR ERV1 -574 133 51 * 1180 228 8 0 chr10 20429307 20429561 -125159727 + L1MB1 LINE L1 5884 6139 -29 1454 149 124 8 chr10 20429561 20429810 -125159478 + AluSg1 SINE Alu 1 278 -31 21 71 0 0 chr10 20429857 20429899 -125159389 + AT_rich Low_complexity Low_complexity 1 42 0 3803 219 30 22 chr10 20430585 20432046 -125157242 + L1MA9 LINE L1 4813 6274 -38 27 0 0 0 chr10 20432214 20432241 -125157047 + AT_rich Low_complexity Low_complexity 1 27 0 211 200 120 0 chr10 20432371 20432446 -125156842 - MIR SINE MIR -44 218 135 2347 56 20 20 chr10 20432518 20432823 -125156465 - AluY SINE Alu -6 305 1 1972 138 3 0 chr10 20434731 20435041 -125154247 - AluSx SINE Alu 0 311 1 194 0 39 0 chr10 20435697 20435723 -125153565 + (TTTA)n Simple_repeat Simple_repeat 3 29 0 270 0 0 0 chr10 20436008 20436038 -125153250 + (TG)n Simple_repeat Simple_repeat 2 31 0 180 311 0 16 chr10 20437305 20437366 -125151922 - MIR SINE MIR -18 244 185 650 320 43 46 chr10 20437442 20437789 -125151499 - L2 LINE L2 -141 3172 2827 297 257 301 0 chr10 20437805 20437846 -125151442 + MER5B DNA MER1_type 1 28 -150 1751 142 50 3 chr10 20437846 20438163 -125151125 + L1PA16 LINE L1 5832 6163 -3 297 257 301 0 chr10 20438163 20438257 -125151031 + MER5B DNA MER1_type 28 177 -1 * 407 290 145 0 chr10 20438257 20438392 -125150896 - L2 LINE L2 -502 2812 2657 1683 250 57 38 chr10 20438416 20438964 -125150324 - MER90 LTR ERV1 -35 579 22 461 252 8 30 chr10 20438967 20439098 -125150190 - L2 LINE L2 -665 2649 2522 6820 218 28 54 chr10 20439119 20441909 -125147379 + L1MB3 LINE L1 3144 5870 -313 2151 108 3 14 chr10 20441909 20442197 -125147091 + AluSx SINE Alu 1 285 -27 6820 218 28 54 chr10 20442197 20442212 -125147076 + L1MB3 LINE L1 5870 5884 -299 21 0 0 0 chr10 20442215 20442236 -125147052 + AT_rich Low_complexity Low_complexity 1 21 0 1408 193 12 15 chr10 20442236 20442567 -125146721 + L1MB3 LINE L1 5854 6183 0 1414 242 29 27 chr10 20442588 20442964 -125146324 + MLT1E2 LTR MaLR 248 624 -2 452 283 79 14 chr10 20443015 20443305 -125145983 - L1MEc LINE L1 -4805 1591 1283 2109 133 7 0 chr10 20443466 20443768 -125145520 + AluJb SINE Alu 1 304 -8 195 129 0 0 chr10 20444034 20444065 -125145223 + (TA)n Simple_repeat Simple_repeat 1 31 0 643 283 242 11 chr10 20444709 20445073 -125144215 + L2 LINE L2 1501 1948 -1366 1165 167 133 21 chr10 20445081 20445321 -125143967 + Tigger7 DNA MER2_type 1 267 -2220 368 281 0 11 chr10 20445326 20445415 -125143873 + Tigger7 DNA MER2_type 2399 2486 -1 1253 257 126 16 chr10 20445418 20445870 -125143418 + L2 LINE L2 1961 2462 -852 2425 294 195 45 chr10 20445871 20447124 -125142164 + L2 LINE L2 1125 2188 -1125 1832 159 55 25 chr10 20447124 20447488 -125141800 - THE1C LTR MaLR 0 375 1 2425 294 195 45 chr10 20447488 20448129 -125141159 + L2 LINE L2 2188 3300 -13 185 0 40 0 chr10 20448130 20448155 -125141133 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 554 64 51 0 chr10 20448222 20448300 -125140988 - AluSg/x SINE Alu -11 299 218 1885 268 19 29 chr10 20448331 20448854 -125140434 - LTR40a LTR ERVL -1 518 1 24 0 0 0 chr10 20449055 20449079 -125140209 + AT_rich Low_complexity Low_complexity 1 24 0 196 315 75 95 chr10 20449580 20449711 -125139577 + MIR SINE MIR 9 141 -121 2078 136 0 0 chr10 20449711 20450036 -125139252 + AluSx SINE Alu 1 325 0 1410 182 37 14 chr10 20450043 20450340 -125138948 + AluJb SINE Alu 1 304 -8 196 315 75 95 chr10 20450340 20450398 -125138890 + MIR SINE MIR 147 204 -58 234 0 0 0 chr10 20450838 20450864 -125138424 + (T)n Simple_repeat Simple_repeat 1 26 0 238 224 0 0 chr10 20451342 20451391 -125137897 + (TA)n Simple_repeat Simple_repeat 2 50 0 2213 101 0 3 chr10 20452018 20452306 -125136982 - AluSc SINE Alu -22 287 1 449 314 83 18 chr10 20453030 20453263 -125136025 + MIR SINE MIR 17 262 0 227 213 21 0 chr10 20453282 20453329 -125135959 + CT-rich Low_complexity Low_complexity 1 48 0 348 285 64 64 chr10 20455618 20455790 -125133498 - L2 LINE L2 -26 3287 3116 76 51 0 0 chr10 20456219 20456337 -125132951 + AT_rich Low_complexity Low_complexity 1 118 0 1734 167 25 48 chr10 20457567 20457686 -125131602 - MER44D DNA MER2_type -1884 603 483 2077 120 3 7 chr10 20457686 20457994 -125131294 - AluSx SINE Alu -5 307 1 1734 167 25 48 chr10 20457994 20458357 -125130931 - MER44D DNA MER2_type -2004 483 1 280 344 23 23 chr10 20458800 20458928 -125130360 + MER5A DNA MER1_type 34 161 -28 575 242 34 62 chr10 20458940 20459118 -125130170 + MER5B DNA MER1_type 6 178 0 22 0 0 0 chr10 20460241 20460263 -125129025 + AT_rich Low_complexity Low_complexity 1 22 0 219 329 71 41 chr10 20460423 20460629 -125128659 - MIR SINE MIR -30 232 27 1855 110 41 7 chr10 20461615 20461907 -125127381 + AluSx SINE Alu 11 312 0 2246 229 59 55 chr10 20462352 20463376 -125125912 - L1ME1 LINE L1 -92 6143 5125 1344 126 0 0 chr10 20463541 20463724 -125125564 - AluSg SINE Alu -127 183 1 2404 258 71 26 chr10 20463756 20464641 -125124647 - L1ME1 LINE L1 -5436 960 36 7329 139 7 2 chr10 20464775 20465938 -125123350 - HSMAR2 DNA Mariner -4 1298 70 219 124 105 19 chr10 20465940 20466045 -125123243 + (TATAA)n Simple_repeat Simple_repeat 2 115 0 469 135 52 21 chr10 20466048 20466144 -125123144 - HSMAR2 DNA Mariner -1202 100 2 256 315 23 23 chr10 20466278 20466300 -125122988 + CT-rich Low_complexity Low_complexity 2 23 -108 2170 134 3 0 chr10 20466300 20466607 -125122681 - AluSg SINE Alu -2 308 1 256 315 23 23 chr10 20466607 20466714 -125122574 + CT-rich Low_complexity Low_complexity 22 131 0 2545 64 0 3 chr10 20466856 20467167 -125122121 + AluY SINE Alu 1 310 -1 317 348 101 34 chr10 20467254 20467432 -125121856 + L2 LINE L2 2597 2786 -528 2180 98 24 0 chr10 20467725 20468012 -125121276 - AluSc SINE Alu -11 298 5 302 260 135 10 chr10 20468045 20468149 -125121139 + L2 LINE L2 3149 3265 -7 21 0 0 0 chr10 20468337 20468358 -125120930 + AT_rich Low_complexity Low_complexity 1 21 0 255 374 122 0 chr10 20468782 20468929 -125120359 - MIR3 SINE MIR -1 207 43 1602 183 44 3 chr10 20469621 20469916 -125119372 - AluJo SINE Alu -5 307 1 27 29 0 0 chr10 20571544 20571578 -125017710 + AT_rich Low_complexity Low_complexity 1 34 0 269 319 74 15 chr10 20571635 20571770 -125017518 - MIR SINE MIR -29 233 91 233 210 73 145 chr10 20571892 20572016 -125017272 - MER117 DNA MER1_type -1 196 82 2053 115 45 3 chr10 20572027 20572315 -125016973 + AluSx SINE Alu 1 300 -12 294 329 58 7 chr10 20573052 20573189 -125016099 + MIR SINE MIR 12 155 -107 25 0 0 0 chr10 20573262 20573287 -125016001 + AT_rich Low_complexity Low_complexity 1 25 0 275 270 56 0 chr10 20574051 20574140 -125015148 - MIR SINE MIR -16 246 153 761 309 49 10 chr10 20574359 20574666 -125014622 + MER46C DNA MER2_type 20 338 0 312 272 25 12 chr10 20574666 20574747 -125014541 - MIR SINE MIR -105 157 76 1885 142 22 0 chr10 20574794 20575093 -125014195 + AluSx SINE Alu 1 305 0 2262 93 10 16 chr10 20575618 20575928 -125013360 - AluY SINE Alu -3 308 1 1184 102 0 0 chr10 20576514 20576680 -125012608 - L1PA10 LINE L1 -4 6164 5999 428 331 141 0 chr10 20578018 20578281 -125011007 - L2 LINE L2 0 3313 3014 349 320 155 36 chr10 20578547 20578966 -125010322 - L2 LINE L2 -18 3295 2827 255 61 0 0 chr10 20579385 20579418 -125009870 + (CA)n Simple_repeat Simple_repeat 2 34 0 30 45 0 0 chr10 20579953 20579997 -125009291 + AT_rich Low_complexity Low_complexity 1 44 0 23 68 0 0 chr10 20580061 20580105 -125009183 + AT_rich Low_complexity Low_complexity 1 44 0 25 31 0 0 chr10 20580146 20580178 -125009110 + AT_rich Low_complexity Low_complexity 1 32 0 42 36 0 0 chr10 20580612 20580668 -125008620 + AT_rich Low_complexity Low_complexity 1 56 0 5990 187 100 70 chr10 20580728 20581286 -125008002 - L1MC3 LINE L1 -18 7767 7228 284 267 0 0 chr10 20581286 20581361 -125007927 - MLT1F1 LTR MaLR -458 109 35 5990 187 100 70 chr10 20581361 20582522 -125006766 - L1MC3 LINE L1 -557 7228 5919 248 234 39 0 chr10 20582742 20582819 -125006469 + T-rich Low_complexity Low_complexity 3 82 0 23 0 0 0 chr10 20583013 20583036 -125006252 + AT_rich Low_complexity Low_complexity 1 23 0 2498 179 37 76 chr10 20583568 20584238 -125005050 - L1MB3 LINE L1 -115 6068 5425 47 33 0 0 chr10 20584613 20584674 -125004614 + AT_rich Low_complexity Low_complexity 1 61 0 1444 189 7 30 chr10 20584759 20585056 -125004232 + AluJo SINE Alu 1 290 -22 38701 73 16 2 chr10 20585856 20591852 -124997436 - L1PA5 LINE L1 -2 6152 79 1127 156 7 0 chr10 20592598 20597818 -124991470 + ALR/Alpha Satellite centromeric 1 5252 -31 34 108 0 0 chr10 20598259 20598398 -124990890 + AT_rich Low_complexity Low_complexity 1 139 0 1823 107 0 0 chr10 20598722 20598965 -124990323 - AluSc SINE Alu -10 299 57 2351 151 32 53 chr10 20599113 20599255 -124990033 - MER65C LTR ERV1 0 461 317 815 147 7 0 chr10 20599255 20599391 -124989897 + L1PA15 LINE L1 6016 6152 -13 2351 151 32 53 chr10 20599391 20599719 -124989569 - MER65C LTR ERV1 -144 317 1 1966 155 5 47 chr10 20600210 20600590 -124988698 - MLT1A1 LTR MaLR 0 365 2 721 264 83 25 chr10 20602374 20602616 -124986672 + MIR SINE MIR 7 262 0 1046 214 39 18 chr10 20602802 20603083 -124986205 + L1MB8 LINE L1 5890 6176 -2 1199 144 0 83 chr10 20603093 20603141 -124986147 + AluJo SINE Alu 83 133 -179 1965 139 3 3 chr10 20603141 20603436 -124985852 + AluSx SINE Alu 1 295 -17 1199 144 0 83 chr10 20603436 20603616 -124985672 + AluJo SINE Alu 133 292 -20 376 84 14 14 chr10 20603952 20604023 -124985265 + (TA)n Simple_repeat Simple_repeat 2 72 0 310 186 17 0 chr10 20604032 20604091 -124985197 - Tigger5 DNA MER2_type 0 2323 2264 242 191 0 0 chr10 20604111 20604153 -124985135 - Tigger5 DNA MER2_type -2268 55 14 350 219 14 14 chr10 20604154 20604227 -124985061 - Tigger5 DNA MER2_type 0 2323 2251 290 273 0 0 chr10 20604196 20604251 -124985037 - Tigger5 DNA MER2_type -2268 55 1 * 354 45 0 0 chr10 20604253 20604297 -124984991 + (CA)n Simple_repeat Simple_repeat 1 44 0 632 320 17 22 chr10 20604954 20605185 -124984103 + MIR SINE MIR 17 246 -16 1158 107 0 0 chr10 20606297 20606486 -124982802 - AluSc SINE Alu 0 320 132 2345 191 63 2 chr10 20606834 20607279 -124982009 - MER70A LTR ERVL 0 472 1 21 36 0 0 chr10 20607411 20607439 -124981849 + AT_rich Low_complexity Low_complexity 1 28 0 242 311 27 0 chr10 20608198 20608272 -124981016 + MLT1I LTR MaLR 115 190 -219 204 125 0 0 chr10 20608439 20608471 -124980817 + (TA)n Simple_repeat Simple_repeat 1 32 0 47 53 0 0 chr10 20609299 20609374 -124979914 + AT_rich Low_complexity Low_complexity 1 75 0 1529 163 31 16 chr10 20611117 20611375 -124977913 + AluJb SINE Alu 6 267 -45 1872 237 59 7 chr10 20611710 20612149 -124977139 + MER74A LTR ERVL 97 558 0 29 0 0 0 chr10 20612691 20612720 -124976568 + AT_rich Low_complexity Low_complexity 1 29 0 6236 157 20 19 chr10 20612720 20613100 -124976188 - L1PB1 LINE L1 -1 6150 5772 342 0 0 0 chr10 20613100 20613138 -124976150 + (TG)n Simple_repeat Simple_repeat 2 39 0 6236 157 20 19 chr10 20613138 20614910 -124974378 - L1PB1 LINE L1 -379 5772 3999 1511 201 17 10 chr10 20615087 20615375 -124973913 - AluJb SINE Alu -22 290 1 372 279 85 78 chr10 20615494 20615988 -124973300 - L1M4 LINE L1 -653 5521 5015 1320 200 3 40 chr10 20615997 20616201 -124973087 - MLT1B LTR MaLR -4 386 195 1608 159 125 6 chr10 20616201 20616369 -124972919 - MER46B DNA MER2_type -2498 233 108 22 35 0 0 chr10 20616369 20616398 -124972890 + AT_rich Low_complexity Low_complexity 1 29 0 1608 159 125 6 chr10 20616398 20616521 -124972767 - MER46B DNA MER2_type -2623 108 1 1320 200 3 40 chr10 20616521 20616616 -124972672 - MLT1B LTR MaLR -195 195 98 2260 79 0 4 chr10 20616619 20616899 -124972389 + AluY SINE Alu 1 279 -32 459 45 0 0 chr10 20616899 20616965 -124972323 + AluY SINE Alu 241 306 -4 545 232 7 53 chr10 20617002 20617153 -124972135 - MLT1B LTR MaLR -246 144 1 38 0 0 0 chr10 20617320 20617358 -124971930 + AT_rich Low_complexity Low_complexity 1 38 0 2137 130 0 0 chr10 20617348 20617640 -124971648 - AluSx SINE Alu -20 292 1 29 0 0 0 chr10 20618481 20618510 -124970778 + AT_rich Low_complexity Low_complexity 1 29 0 525 259 35 24 chr10 20618535 20618705 -124970583 + MER5B DNA MER1_type 3 174 -4 471 243 78 66 chr10 20619069 20619312 -124969976 - Charlie2 DNA MER1_type -634 2228 1983 9212 192 43 19 chr10 20619322 20622465 -124966823 - L1MA10 LINE L1 -2 6332 3114 189 220 0 51 chr10 20622660 20622719 -124966569 + MIR SINE MIR 175 230 -32 188 289 0 0 chr10 20622686 20622738 -124966550 + L2 LINE L2 3202 3253 -19 * 4677 164 23 20 chr10 20622768 20623651 -124965637 - L1MB3 LINE L1 -7 6176 5292 22 88 0 0 chr10 20624080 20624137 -124965151 + AT_rich Low_complexity Low_complexity 1 57 0 368 330 64 12 chr10 20624369 20624542 -124964746 - MIR SINE MIR -15 247 66 2458 56 0 0 chr10 20624591 20624878 -124964410 + AluY SINE Alu 1 287 -24 557 366 98 0 chr10 20625835 20626081 -124963207 + MER115 DNA AcHobo 57 326 -367 281 26 0 26 chr10 20626915 20626954 -124962334 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 2425 199 20 66 chr10 20626973 20627576 -124961712 - LTR9 LTR ERV1 0 612 38 313 289 56 38 chr10 20628888 20629086 -124960202 + MIR SINE MIR 15 255 -7 576 244 154 56 chr10 20629126 20629450 -124959838 - MLT1J2 LTR MaLR -23 427 72 194 271 140 56 chr10 20629737 20629844 -124959444 - L2 LINE L2 -1030 2284 2169 197 189 151 19 chr10 20630665 20630718 -124958570 + MER5A DNA MER1_type 120 179 -10 5022 184 117 9 chr10 20631868 20632110 -124957178 + L1PA16 LINE L1 4124 4339 -1827 402 21 0 0 chr10 20632110 20632157 -124957131 + (CA)n Simple_repeat Simple_repeat 2 48 0 5022 184 117 9 chr10 20632157 20633742 -124955546 + L1PA16 LINE L1 4339 6157 -9 3981 146 3 13 chr10 20634125 20634798 -124954490 + L1PB3 LINE L1 5488 6153 -1 2451 54 0 7 chr10 20634819 20635117 -124954171 + AluY SINE Alu 1 296 -15 353 269 91 88 chr10 20635133 20635441 -124953847 + L1ME4a LINE L1 5546 5854 -267 26 30 0 0 chr10 20636966 20636999 -124952289 + AT_rich Low_complexity Low_complexity 1 33 0 203 275 165 0 chr10 20640769 20640860 -124948428 - L2 LINE L2 -778 2536 2431 21 71 0 0 chr10 20641621 20641663 -124947625 + AT_rich Low_complexity Low_complexity 1 42 0 539 307 119 59 chr10 20641777 20642266 -124947022 - MLT1H1 LTR MaLR 0 555 38 30 27 0 0 chr10 20642409 20642446 -124946842 + AT_rich Low_complexity Low_complexity 1 37 0 1474 188 9 32 chr10 20642448 20642789 -124946499 - L1MB3 LINE L1 -10 6173 5841 2168 95 7 20 chr10 20642985 20643290 -124945998 + AluSg SINE Alu 1 301 -9 6513 211 31 19 chr10 20643442 20644436 -124944852 + L1PA12 LINE L1 2117 3097 -4487 2025 158 0 0 chr10 20644436 20644734 -124944554 - AluSx SINE Alu -14 298 1 6513 211 31 19 chr10 20644734 20646086 -124943202 + L1PA12 LINE L1 3097 4497 -3087 1341 206 39 52 chr10 20648804 20649134 -124940154 + MLT2D LTR ERVL 89 414 0 23 0 0 0 chr10 20649248 20649271 -124940017 + AT_rich Low_complexity Low_complexity 1 23 0 1562 205 43 0 chr10 20649335 20649662 -124939626 - L1 LINE L1 -2261 3885 3545 351 286 53 21 chr10 20649769 20650017 -124939271 + L1 LINE L1 4806 5059 -1087 697 249 60 90 chr10 20650277 20650642 -124938646 - L2 LINE L2 -1 3312 2959 592 243 47 24 chr10 20650664 20650833 -124938455 - MER20 DNA MER1_type -1 218 46 1663 132 20 0 chr10 20651207 20651457 -124937831 + AluJb SINE Alu 1 255 -57 327 49 0 0 chr10 20651470 20651511 -124937777 + (GAAAA)n Simple_repeat Simple_repeat 3 43 0 28 99 0 0 chr10 20651642 20651733 -124937555 + AT_rich Low_complexity Low_complexity 1 91 0 24 91 0 0 chr10 20651922 20651988 -124937300 + AT_rich Low_complexity Low_complexity 1 66 0 214 296 0 0 chr10 20653300 20653354 -124935934 - L2 LINE L2 -5 3267 3214 244 265 140 29 chr10 20653611 20653747 -124935541 - MIR SINE MIR -92 170 20 216 224 0 0 chr10 20654026 20654093 -124935195 + (CA)n Simple_repeat Simple_repeat 2 68 0 2923 6 0 0 chr10 20654122 20654439 -124934849 - AluYb8 SINE Alu -1 317 1 237 266 0 0 chr10 20654501 20654595 -124934693 + GA-rich Low_complexity Low_complexity 3 96 0 1721 171 60 37 chr10 20654706 20655087 -124934201 + MLT1B LTR MaLR 1 390 0 866 226 6 6 chr10 20655363 20655540 -124933748 - MER5B DNA MER1_type -1 177 1 316 318 70 16 chr10 20655687 20655816 -124933472 + HAL1 LINE L1 818 953 -1554 259 259 12 0 chr10 20656041 20656122 -124933166 + (TA)n Simple_repeat Simple_repeat 2 83 0 559 246 47 47 chr10 20656184 20656314 -124932974 + L1MC5 LINE L1 7701 7833 -128 2044 180 56 15 chr10 20656314 20656725 -124932563 - MSTA LTR MaLR 0 428 1 559 246 47 47 chr10 20656725 20656826 -124932462 + L1MC5 LINE L1 7832 7932 -29 464 243 62 66 chr10 20657345 20657604 -124931684 - L2 LINE L2 0 3313 3056 183 354 10 21 chr10 20657760 20657856 -124931432 - MIR SINE MIR -8 254 160 1327 197 62 0 chr10 20657964 20658269 -124931019 + MER33 DNA MER1_type 1 324 0 504 304 108 27 chr10 20658592 20658964 -124930324 - MER93a LTR ERV1 0 402 1 1615 315 43 38 chr10 20658965 20659264 -124930024 - MER93a-int LTR ERV1 -395 7142 6846 6252 113 29 18 chr10 20659264 20660222 -124929066 - LTR5 LTR ERVK 0 969 1 1615 315 43 38 chr10 20660222 20660836 -124928452 - MER93a-int LTR ERV1 -691 6846 6225 1072 233 32 109 chr10 20661300 20661704 -124927584 - MER93a-int LTR ERV1 -1341 6196 5824 3209 229 50 77 chr10 20662031 20662544 -124926744 - MER93a-int LTR ERV1 -1497 3439 2913 1952 175 62 52 chr10 20662544 20662915 -124926373 + MSTB LTR MaLR 1 378 -48 2416 76 0 0 chr10 20662915 20663216 -124926072 + AluY SINE Alu 1 301 -10 1952 175 62 52 chr10 20663216 20663266 -124926022 + MSTB LTR MaLR 378 426 0 3209 229 50 77 chr10 20663266 20664838 -124924450 - MER93a-int LTR ERV1 -2023 2913 1916 275 186 0 0 chr10 20664901 20664944 -124924344 - MER34 LTR ERV1 0 542 500 394 179 49 81 chr10 20664952 20665003 -124924285 - MER34 LTR ERV1 -288 254 203 2322 84 0 34 chr10 20665003 20665325 -124923963 - AluY SINE Alu 0 311 1 394 179 49 81 chr10 20665325 20665396 -124923892 - MER34 LTR ERV1 -339 203 136 283 273 40 0 chr10 20665398 20665497 -124923791 - MER93a-int LTR ERV1 -2477 2394 2292 1097 226 65 42 chr10 20665519 20665952 -124923336 - MER93a-int LTR ERV1 -3470 1466 1024 519 196 5 38 chr10 20666072 20666256 -124923032 + CT-rich Low_complexity Low_complexity 3 180 0 394 291 0 28 chr10 20666333 20666474 -124922814 - MER34C LTR ERV1 -155 430 294 594 266 107 52 chr10 20667127 20667360 -124921928 - MER93a-int LTR ERV1 -7289 248 3 577 287 71 45 chr10 20667367 20667747 -124921541 - MER93a LTR ERV1 -12 390 1 1275 203 40 47 chr10 20668939 20669240 -124920048 + AluJb SINE Alu 3 301 -11 367 329 129 6 chr10 20669527 20669697 -124919591 - MIR SINE MIR -71 191 1 21 0 0 0 chr10 20670909 20670930 -124918358 + AT_rich Low_complexity Low_complexity 1 21 0 1133 201 7 26 chr10 20671748 20672021 -124917267 - L1MCb LINE L1 -5077 968 701 584 283 12 12 chr10 20672125 20672298 -124916990 - MIR SINE MIR -78 184 12 766 231 61 38 chr10 20672512 20672724 -124916564 - MIR SINE MIR -44 218 2 2066 99 35 3 chr10 20673652 20673936 -124915352 + AluSx SINE Alu 1 293 -19 2044 118 0 43 chr10 20674328 20674672 -124914616 - AluSp SINE Alu 0 313 1 22 35 0 0 chr10 20675814 20675843 -124913445 + AT_rich Low_complexity Low_complexity 1 29 0 1058 225 46 26 chr10 20676288 20676595 -124912693 + MER119 DNA MER1_type 157 469 -114 2240 105 0 0 chr10 20677770 20678075 -124911213 + AluSc SINE Alu 1 305 -4 2233 217 71 12 chr10 20678154 20678716 -124910572 + L1MCa LINE L1 1 595 -5831 254 260 41 0 chr10 20678720 20678793 -124910495 + L1MCa LINE L1 2088 2163 -4263 * 701 242 73 45 chr10 20678792 20679378 -124909910 + L1MCa LINE L1 2116 2719 -3707 680 193 80 0 chr10 20679364 20679551 -124909737 + L1M4 LINE L1 4487 4688 -1458 * 756 194 32 11 chr10 20679552 20679738 -124909550 + L1MC2 LINE L1 6149 6338 -6 410 94 60 0 chr10 20679779 20679896 -124909392 + (TA)n Simple_repeat Simple_repeat 1 124 0 395 281 76 12 chr10 20680561 20680732 -124908556 - MIR SINE MIR 0 262 81 2000 123 0 4 chr10 20680785 20681062 -124908226 - AluSg SINE Alu -30 280 5 21 0 0 0 chr10 20681351 20681372 -124907916 + AT_rich Low_complexity Low_complexity 1 21 0 2071 165 89 2 chr10 20681958 20682352 -124906936 - MSTA LTR MaLR 0 428 1 472 249 58 75 chr10 20682364 20682605 -124906683 + MLT1K LTR MaLR 194 430 -158 241 320 104 41 chr10 20683181 20683380 -124905908 + L1ME4a LINE L1 5478 5663 -458 2124 95 3 0 chr10 20683380 20683696 -124905592 - AluSg SINE Alu 0 317 1 241 320 104 41 chr10 20683696 20683860 -124905428 + L1ME4a LINE L1 5663 5865 -256 287 221 70 0 chr10 20683971 20684057 -124905231 - L1MC4 LINE L1 -1337 6705 6614 343 291 45 34 chr10 20684078 20684257 -124905031 + L1ME4a LINE L1 5935 6115 -6 684 307 87 63 chr10 20684593 20684863 -124904425 + LTR33A LTR ERVL 23 310 -213 469 46 0 0 chr10 20684863 20684928 -124904360 - L1PA6 LINE L1 0 6154 6090 684 307 87 63 chr10 20684928 20685103 -124904185 + LTR33A LTR ERVL 310 479 -44 181 0 69 0 chr10 20685240 20685269 -124904019 + (CATTA)n Simple_repeat Simple_repeat 5 35 0 330 357 91 32 chr10 20685409 20685800 -124903488 - L2 LINE L2 -230 3083 2640 836 191 169 0 chr10 20685822 20686011 -124903277 - MLT1A1 LTR MaLR 0 365 145 241 232 259 9 chr10 20686014 20686126 -124903162 + L2 LINE L2 2946 3085 -228 785 143 41 7 chr10 20686253 20686400 -124902888 - MLT1A1 LTR MaLR -213 152 1 571 309 77 9 chr10 20687647 20687867 -124901421 - MIR SINE MIR -26 236 2 1356 181 15 15 chr10 20688190 20688365 -124900923 - AluJb SINE Alu -3 309 132 396 103 0 0 chr10 20688365 20688423 -124900865 + (TG)n Simple_repeat Simple_repeat 1 58 0 1356 181 15 15 chr10 20688423 20688517 -124900771 - AluJb SINE Alu -179 133 40 819 148 0 16 chr10 20689348 20689476 -124899812 + FLAM_C SINE Alu 3 128 -15 40 59 0 0 chr10 20690899 20690967 -124898321 + AT_rich Low_complexity Low_complexity 1 68 0 273 360 12 0 chr10 20691318 20691479 -124897809 - L1M4 LINE L1 -3600 2546 2384 433 188 20 20 chr10 20691554 20691655 -124897633 + LTR56 LTR ERV1 1 101 -344 545 216 10 0 chr10 20691663 20691765 -124897523 - AluJb SINE Alu -77 235 133 1461 214 3 34 chr10 20691765 20692087 -124897201 - AluJb SINE Alu 0 312 1 2041 127 20 6 chr10 20692087 20692434 -124896854 + LTR56 LTR ERV1 94 445 0 1940 151 7 0 chr10 20692703 20693001 -124896287 - AluSq SINE Alu -13 300 1 1711 182 38 58 chr10 20693467 20693863 -124895425 - MLT1B LTR MaLR -2 388 1 399 249 35 81 chr10 20693950 20694147 -124895141 - HAL1 LINE L1 -899 1608 1421 336 316 158 27 chr10 20694352 20694681 -124894607 - HAL1 LINE L1 -1319 1188 817 225 0 0 0 chr10 20696300 20696325 -124892963 + (T)n Simple_repeat Simple_repeat 1 25 0 773 174 0 27 chr10 20696325 20696474 -124892814 + Tigger1 DNA MER2_type 55 199 -2219 2096 125 7 0 chr10 20696475 20696780 -124892508 - AluSq SINE Alu -6 307 1 4106 134 30 30 chr10 20697048 20697774 -124891514 + Tigger1 DNA MER2_type 192 917 -1501 2848 144 40 6 chr10 20697753 20698233 -124891055 + Tigger1 DNA MER2_type 1920 2415 -3 * 334 356 59 0 chr10 20698243 20698378 -124890910 - MIR3 SINE MIR -61 147 5 5122 99 45 6 chr10 20698816 20699725 -124889563 - L1PA13 LINE L1 -4 6159 5214 6584 181 32 4 chr10 20699734 20701036 -124888252 - L1PA13 LINE L1 -1645 4501 3163 22 56 0 0 chr10 20701174 20701210 -124888078 + AT_rich Low_complexity Low_complexity 1 36 0 287 196 0 20 chr10 20702339 20702390 -124886898 + L3 LINE CR1 1517 1566 -11 623 296 25 20 chr10 20702413 20702609 -124886679 - L2 LINE L2 -1 3312 3116 1182 166 30 21 chr10 20702609 20702844 -124886444 - MSTB LTR MaLR 0 426 190 5511 78 23 18 chr10 20702865 20703634 -124885654 - L1PA10 LINE L1 -4 6164 5392 1024 154 126 0 chr10 20703640 20703815 -124885473 - MSTB LTR MaLR -229 197 1 389 336 77 40 chr10 20703815 20704150 -124885138 - L2 LINE L2 -193 3120 2778 6149 226 81 40 chr10 20704578 20707380 -124881908 - L1MC2 LINE L1 -1 6623 3939 2045 125 4 0 chr10 20707380 20707692 -124881596 + AluSx SINE Alu 1 313 0 6149 226 81 40 chr10 20707692 20708055 -124881233 - L1MC2 LINE L1 -2685 3939 3592 6747 55 8 21 chr10 20708055 20708665 -124880623 + L1PA7 LINE L1 5078 5673 -481 2157 110 0 10 chr10 20708665 20708974 -124880314 + AluSc SINE Alu 1 306 -3 6747 55 8 21 chr10 20708974 20709444 -124879844 + L1PA7 LINE L1 5673 6148 -6 6149 226 81 40 chr10 20709444 20710029 -124879259 - L1MC2 LINE L1 -3032 3592 2708 240 246 33 0 chr10 20710052 20710113 -124879175 - MLT1A1 LTR MaLR -6 359 297 2272 223 11 113 chr10 20710124 20710495 -124878793 - L1MC2 LINE L1 -5716 710 303 2134 90 4 0 chr10 20710495 20710772 -124878516 + AluSg1 SINE Alu 1 278 -31 600 50 0 0 chr10 20710772 20710852 -124878436 + (TAGA)n Simple_repeat Simple_repeat 1 80 0 2272 223 11 113 chr10 20710852 20711133 -124878155 - L1MC2 LINE L1 -6122 304 146 1673 152 58 36 chr10 20711133 20711463 -124877825 + MER1B DNA MER1_type 1 337 0 2272 223 11 113 chr10 20711463 20711588 -124877700 - L1MC2 LINE L1 -6280 146 10 1458 155 174 35 chr10 20712265 20712639 -124876649 + MSTB LTR MaLR 1 426 0 21 57 0 0 chr10 20712772 20712807 -124876481 + AT_rich Low_complexity Low_complexity 1 35 0 1916 87 36 71 chr10 20714608 20714917 -124874371 - AluY SINE Alu -13 298 1 241 130 19 19 chr10 20715129 20715183 -124874105 + (TA)n Simple_repeat Simple_repeat 2 55 0 261 0 0 0 chr10 20716796 20716825 -124872463 + (TTG)n Simple_repeat Simple_repeat 2 30 0 188 283 192 17 chr10 20716996 20717116 -124872172 + L2 LINE L2 772 912 -2402 226 284 11 45 chr10 20717317 20717405 -124871883 - MIR SINE MIR -27 235 151 21 71 0 0 chr10 20718072 20718114 -124871174 + AT_rich Low_complexity Low_complexity 1 42 0 205 37 37 56 chr10 20718115 20718169 -124871119 + (TTA)n Simple_repeat Simple_repeat 1 53 0 278 226 48 0 chr10 20718195 20718319 -124870969 + (TA)n Simple_repeat Simple_repeat 2 131 0 1655 232 68 18 chr10 20721034 20721474 -124867814 + MLT1C LTR MaLR 6 467 0 341 283 20 10 chr10 20722699 20722798 -124866490 + L2 LINE L2 3208 3307 -6 473 291 91 17 chr10 20723032 20723207 -124866081 + MIR3 SINE MIR 19 206 -2 771 244 0 6 chr10 20723554 20723710 -124865578 - MER8 DNA MER2_type 0 239 85 559 258 0 0 chr10 20723711 20723831 -124865457 + MER63 DNA MER1_type 673 792 -270 318 26 0 0 chr10 20723937 20723976 -124865312 + (CA)n Simple_repeat Simple_repeat 1 39 0 312 220 40 40 chr10 20724447 20724547 -124864741 - LTR67 LTR ERVL -21 536 437 204 208 38 0 chr10 20726168 20726221 -124863067 + (TA)n Simple_repeat Simple_repeat 2 56 0 * 208 151 0 57 chr10 20726186 20726239 -124863049 + (TATAA)n Simple_repeat Simple_repeat 3 52 0 1913 143 0 0 chr10 20726865 20727130 -124862158 + AluSx SINE Alu 3 267 -45 22 0 0 0 chr10 20728599 20728621 -124860667 + AT_rich Low_complexity Low_complexity 1 22 0 42771 35 21 2 chr10 20729646 20735706 -124853582 - L1PA3 LINE L1 0 6155 2 1916 150 0 0 chr10 20737114 20737394 -124851894 - AluSx SINE Alu -30 282 3 374 57 19 0 chr10 20737630 20737683 -124851605 + (TAGA)n Simple_repeat Simple_repeat 2 55 0 593 121 61 0 chr10 20738702 20738867 -124850421 + (TA)n Simple_repeat Simple_repeat 2 176 0 216 67 0 0 chr10 20739155 20739185 -124850103 + (TG)n Simple_repeat Simple_repeat 1 30 0 2421 136 36 45 chr10 20739188 20739658 -124849630 - L1MC1 LINE L1 -11 6322 5857 1933 140 10 7 chr10 20739940 20740247 -124849041 - AluSq SINE Alu -1 312 5 947 269 87 39 chr10 20740594 20741007 -124848281 - LTR16A LTR ERVL 0 450 18 516 32 0 0 chr10 20741182 20741244 -124848044 + (CA)n Simple_repeat Simple_repeat 2 63 0 239 269 37 90 chr10 20742247 20742381 -124846907 + MIR3 SINE MIR 77 203 -5 4713 102 7 1 chr10 20742758 20743444 -124845844 + L1PB2 LINE L1 5460 6149 -2 364 262 101 40 chr10 20744424 20744573 -124844715 + MIR SINE MIR 49 206 -56 29 0 0 0 chr10 20744740 20744769 -124844519 + AT_rich Low_complexity Low_complexity 1 29 0 1767 166 3 32 chr10 20744901 20745215 -124844073 + AluJo SINE Alu 1 305 -7 649 196 0 12 chr10 20745216 20745379 -124843909 + GA-rich Low_complexity Low_complexity 2 162 0 191 300 69 46 chr10 20746036 20746166 -124843122 - L2 LINE L2 0 3313 3181 228 319 14 0 chr10 20746231 20746300 -124842988 + L1ME2 LINE L1 6008 6077 -87 994 217 14 14 chr10 20746700 20746917 -124842371 + U3 snRNA snRNA 1 217 0 600 346 101 23 chr10 20746927 20747583 -124841705 - L2 LINE L2 -834 2480 1774 221 179 0 0 chr10 20747890 20747929 -124841359 + A-rich Low_complexity Low_complexity 1 39 0 459 329 26 0 chr10 20748320 20748475 -124840813 - LTR33 LTR ERVL -360 161 3 196 307 69 30 chr10 20748742 20748843 -124840445 + MIR SINE MIR 114 218 -44 1466 219 23 13 chr10 20749329 20749635 -124839653 - AluJo SINE Alu -3 309 1 25 31 0 0 chr10 20749635 20749667 -124839621 + AT_rich Low_complexity Low_complexity 1 32 0 24 0 0 0 chr10 20749925 20749949 -124839339 + AT_rich Low_complexity Low_complexity 1 24 0 262 294 0 11 chr10 20750385 20750477 -124838811 + (TA)n Simple_repeat Simple_repeat 2 92 0 3676 144 31 69 chr10 20750494 20750650 -124838638 + Tigger1 DNA MER2_type 1 161 -2257 7342 43 4 0 chr10 20750650 20752150 -124837138 - L1PA5 LINE L1 -1 6153 4651 3676 144 31 69 chr10 20752150 20752701 -124836587 + Tigger1 DNA MER2_type 161 681 -1737 2092 142 12 6 chr10 20752838 20753182 -124836106 + Tigger1 DNA MER2_type 714 1059 -1359 847 208 0 6 chr10 20753213 20753381 -124835907 + Tigger1 DNA MER2_type 2252 2418 0 1849 133 13 41 chr10 20753603 20753919 -124835369 - AluSx SINE Alu -3 309 3 213 94 0 0 chr10 20753925 20753957 -124835331 + (T)n Simple_repeat Simple_repeat 1 32 0 25 0 0 0 chr10 20754091 20754116 -124835172 + AT_rich Low_complexity Low_complexity 1 25 0 1171 202 40 21 chr10 20755665 20755999 -124833289 - MLT1B LTR MaLR 0 390 4 210 118 0 0 chr10 20758394 20758428 -124830860 + (ATG)n Simple_repeat Simple_repeat 2 35 0 1737 175 31 8 chr10 20758535 20758890 -124830398 - L1MA6 LINE L1 0 6300 5938 643 292 59 9 chr10 20759175 20759394 -124829894 + MIR SINE MIR 26 255 -7 202 174 43 0 chr10 20759421 20759467 -124829821 + GA-rich Low_complexity Low_complexity 3 50 0 1973 148 107 18 chr10 20761017 20761408 -124827880 - MSTA LTR MaLR -2 426 1 352 330 140 61 chr10 20761692 20762164 -124827124 + L2 LINE L2 2235 2743 -571 469 266 203 10 chr10 20762549 20762756 -124826532 - MIR SINE MIR -9 253 7 258 180 0 0 chr10 20762928 20762978 -124826310 + L1MA5 LINE L1 6251 6300 0 1430 123 8 0 chr10 20763452 20763687 -124825601 + L1MA5A LINE L1 6059 6295 -2 1663 197 10 7 chr10 20763689 20763989 -124825299 + AluJo SINE Alu 1 301 -11 37 39 0 0 chr10 20764014 20764065 -124825223 + AT_rich Low_complexity Low_complexity 1 51 0 21 0 0 0 chr10 20764610 20764631 -124824657 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 20764774 20764795 -124824493 + AT_rich Low_complexity Low_complexity 1 21 0 295 98 48 17 chr10 20766364 20766428 -124822860 + L1PA13 LINE L1 6065 6129 -34 5493 121 8 4 chr10 20766466 20767302 -124821986 - L1PA13 LINE L1 -55 6108 5269 324 332 98 59 chr10 20767419 20767705 -124821583 + L2 LINE L2 2056 2352 -962 235 185 169 0 chr10 20767979 20768044 -124821244 + Charlie2 DNA MER1_type 2228 2303 -559 595 152 98 9 chr10 20768481 20768622 -124820666 + AluJb SINE Alu 161 311 0 624 260 121 26 chr10 20768633 20768756 -124820532 + Charlie2 DNA MER1_type 2442 2552 -310 1349 118 74 22 chr10 20768756 20768985 -124820303 - L1PA15 LINE L1 0 6165 5925 624 260 121 26 chr10 20768985 20769242 -124820046 + Charlie2 DNA MER1_type 2552 2858 -4 26 30 0 0 chr10 20769835 20769868 -124819420 + AT_rich Low_complexity Low_complexity 1 33 0 22 35 0 0 chr10 20769927 20769956 -124819332 + AT_rich Low_complexity Low_complexity 1 29 0 280 318 60 34 chr10 20770124 20770473 -124818815 + HAL1b LINE L1 67 424 -924 377 293 131 41 chr10 20770499 20771201 -124818087 + L1MC/D LINE L1 3893 4657 -1489 364 329 35 48 chr10 20771409 20771640 -124817648 + L1MC/D LINE L1 4807 5034 -1112 2422 177 22 84 chr10 20771994 20772541 -124816747 - MLT2B2 LTR ERVL -2 513 1 984 248 138 21 chr10 20772546 20772929 -124816359 + L1MC/D LINE L1 5373 5800 -2008 2148 123 6 22 chr10 20773201 20773517 -124815771 + AluSx SINE Alu 1 311 -1 704 227 71 0 chr10 20773538 20773679 -124815609 + FRAM SINE Alu 1 151 -15 233 372 41 8 chr10 20773686 20773807 -124815481 - MIR SINE MIR -128 134 10 229 360 12 12 chr10 20774155 20774241 -124815047 + MIR SINE MIR 29 114 -148 795 316 78 73 chr10 20774879 20776052 -124813236 + L1ME LINE L1 4046 5224 -922 1780 127 12 82 chr10 20776073 20776404 -124812884 + AluSx SINE Alu 1 308 -4 401 312 66 68 chr10 20776593 20777032 -124812256 + L1ME LINE L1 5321 5758 -363 5929 108 31 4 chr10 20779615 20780590 -124808698 - L1PA13 LINE L1 -11 6152 5167 518 333 93 35 chr10 20780608 20781059 -124808229 - LTR33 LTR ERVL -1 520 44 2095 136 3 0 chr10 20781567 20781861 -124807427 + AluSx SINE Alu 1 295 -17 593 156 0 90 chr10 20782299 20782421 -124806867 - 5S rRNA rRNA -1 120 10 2074 143 0 6 chr10 20782444 20782758 -124806530 - AluSx SINE Alu 0 312 1 180 0 0 0 chr10 20783435 20783455 -124805833 + (CAA)n Simple_repeat Simple_repeat 2 21 0 262 271 6 73 chr10 20784108 20784285 -124805003 + L1MEd LINE L1 977 1141 -4978 28 48 0 0 chr10 20784478 20784520 -124804768 + AT_rich Low_complexity Low_complexity 1 42 0 853 167 0 0 chr10 20784525 20784663 -124804625 - AluSg/x SINE Alu -19 291 154 2228 118 0 0 chr10 20785153 20785450 -124803838 + AluSx SINE Alu 1 297 -15 2446 90 0 0 chr10 20786355 20786665 -124802623 + AluSq SINE Alu 1 310 -3 2159 114 3 7 chr10 20788617 20788923 -124800365 - AluSq SINE Alu -6 307 3 22 35 0 0 chr10 20789027 20789056 -124800232 + AT_rich Low_complexity Low_complexity 1 29 0 2073 98 0 46 chr10 20791686 20791992 -124797296 + AluSq SINE Alu 1 292 -21 1083 282 144 2 chr10 20792304 20792726 -124796562 + LTR33 LTR ERVL 32 513 -8 196 382 0 0 chr10 20793405 20793460 -124795828 - MIR SINE MIR -167 95 41 6165 41 1 0 chr10 20793765 20794513 -124794775 + L1PA4 LINE L1 5406 6154 -1 29 28 0 0 chr10 20794529 20794565 -124794723 + AT_rich Low_complexity Low_complexity 1 36 0 2096 124 0 3 chr10 20794944 20795242 -124794046 + AluSx SINE Alu 1 297 -15 248 279 38 25 chr10 20795316 20795395 -124793893 + L2 LINE L2 3232 3311 -2 307 242 113 57 chr10 20796108 20796232 -124793056 + MER94 DNA DNA 1 131 -3 605 304 12 21 chr10 20796387 20796627 -124792661 + L1MEc LINE L1 779 1016 -6122 559 238 28 18 chr10 20797355 20797367 -124791921 + L1MEc LINE L1 1538 1548 -5470 6159 87 24 2 chr10 20797367 20798645 -124790643 - L1PA14 LINE L1 -2 6159 4856 559 238 28 18 chr10 20798645 20798890 -124790398 + L1MEc LINE L1 1548 1936 -5082 494 308 47 49 chr10 20798873 20799282 -124790006 + L1MEc LINE L1 2339 2746 -4392 * 185 214 24 0 chr10 20800186 20800228 -124789060 - MIR SINE MIR -3 259 217 596 240 26 52 chr10 20800430 20800622 -124788666 - LTR67 LTR ERVL -7 550 364 312 355 0 0 chr10 20800721 20800831 -124788457 - LTR67 LTR ERVL -346 211 102 216 387 13 13 chr10 20800989 20801139 -124788149 - L2 LINE L2 -414 2900 2751 228 205 0 0 chr10 20801259 20801298 -124787990 + AluJ/monomer SINE Alu 1 39 -263 529 266 29 7 chr10 20801382 20801521 -124787767 - MIR SINE MIR -112 150 9 21 0 0 0 chr10 20801807 20801828 -124787460 + AT_rich Low_complexity Low_complexity 1 21 0 1634 163 0 8 chr10 20801828 20802085 -124787203 - AluJo SINE Alu -21 291 37 229 26 53 0 chr10 20803784 20803822 -124785466 + (TTG)n Simple_repeat Simple_repeat 2 41 0 192 234 0 0 chr10 20804095 20804142 -124785146 + (TATATG)n Simple_repeat Simple_repeat 2 48 0 243 43 0 0 chr10 20804146 20804192 -124785096 + LTR66 LTR ERVL 394 439 -171 683 273 67 25 chr10 20804508 20804746 -124784542 + MIR SINE MIR 15 262 0 888 162 35 0 chr10 20806179 20806377 -124782911 - L1MA2 LINE L1 0 6304 6100 2339 108 0 0 chr10 20806488 20806794 -124782494 + AluSp SINE Alu 1 306 -7 235 314 9 57 chr10 20806894 20806999 -124782289 + MIR SINE MIR 107 206 -56 239 54 27 0 chr10 20807110 20807147 -124782141 + (CA)n Simple_repeat Simple_repeat 2 39 0 320 301 35 64 chr10 20807183 20807356 -124781932 + MIR3 SINE MIR 34 201 -7 480 286 56 6 chr10 20807862 20808023 -124781265 - MIR SINE MIR 0 262 94 26 0 0 0 chr10 20808129 20808155 -124781133 + AT_rich Low_complexity Low_complexity 1 26 0 23 78 0 0 chr10 20808325 20808376 -124780912 + AT_rich Low_complexity Low_complexity 1 51 0 7032 39 1 0 chr10 20809570 20810419 -124778869 + L1PA4 LINE L1 5305 6154 -1 189 378 51 11 chr10 20811198 20811315 -124777973 - MIR SINE MIR -76 132 5 3603 141 0 3 chr10 20811647 20812220 -124777068 - L1PB4 LINE L1 0 6156 5586 669 260 37 98 chr10 20812402 20812810 -124776478 - L1MDa LINE L1 -6123 417 35 180 0 0 0 chr10 20812829 20812849 -124776439 + (TAAAA)n Simple_repeat Simple_repeat 5 24 0 34 0 0 0 chr10 20813314 20813348 -124775940 + AT_rich Low_complexity Low_complexity 1 34 0 1140 203 101 85 chr10 20813634 20813871 -124775417 - MER34B LTR ERV1 0 565 333 207 0 0 0 chr10 20813871 20813894 -124775394 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1140 203 101 85 chr10 20813894 20814208 -124775080 - MER34B LTR ERV1 -232 333 5 1497 359 54 34 chr10 20814382 20815345 -124773943 + L2 LINE L2 206 1187 -2127 358 334 140 50 chr10 20815359 20815796 -124773492 + HAL1 LINE L1 14 489 -2018 776 163 7 22 chr10 20815797 20815932 -124773356 + FLAM_C SINE Alu 1 133 0 2055 173 8 19 chr10 20815991 20816030 -124773258 - MLT1A1 LTR MaLR 0 365 327 2141 156 68 24 chr10 20816030 20816217 -124773071 + MSTA LTR MaLR 1 178 -250 180 0 0 0 chr10 20816217 20816237 -124773051 + (TC)n Simple_repeat Simple_repeat 2 21 0 2141 156 68 24 chr10 20816237 20816459 -124772829 + MSTA LTR MaLR 178 428 0 2055 173 8 19 chr10 20816459 20816788 -124772500 - MLT1A1 LTR MaLR -38 327 1 755 248 129 118 chr10 20817023 20818417 -124770871 + HAL1 LINE L1 758 2166 -341 363 23 0 0 chr10 20818689 20818733 -124770555 + (CA)n Simple_repeat Simple_repeat 1 44 0 189 397 0 32 chr10 20818740 20818866 -124770422 + L2 LINE L2 1233 1354 -1960 319 302 23 16 chr10 20819152 20819281 -124770007 + L2 LINE L2 1698 1827 -1487 319 245 163 0 chr10 20819364 20819462 -124769826 + L2 LINE L2 3185 3298 -15 1729 53 0 49 chr10 20819502 20819727 -124769561 - AluY SINE Alu -13 298 85 1902 157 0 26 chr10 20819958 20820270 -124769018 + AluSx SINE Alu 1 304 -8 207 200 0 22 chr10 20820546 20820591 -124768697 + T-rich Low_complexity Low_complexity 4 47 0 21 0 0 0 chr10 20820897 20820918 -124768370 + AT_rich Low_complexity Low_complexity 1 21 0 2196 112 6 10 chr10 20821034 20821346 -124767942 - AluSx SINE Alu -1 311 1 2324 78 0 16 chr10 20821723 20822030 -124767258 + AluY SINE Alu 1 302 -9 249 264 38 0 chr10 20822445 20822551 -124766737 + (TA)n Simple_repeat Simple_repeat 2 111 0 319 368 52 52 chr10 20822581 20822831 -124766457 - L2 LINE L2 -170 3143 2894 182 327 0 0 chr10 20822892 20822947 -124766341 + L2 LINE L2 3245 3299 -14 267 206 88 0 chr10 20824003 20824071 -124765217 + MIR SINE MIR 109 182 -80 969 192 29 0 chr10 20824071 20824243 -124765045 + MER5A DNA MER1_type 1 177 -12 204 338 86 56 chr10 20824560 20824794 -124764494 - L2 LINE L2 -221 3051 2811 22603 147 14 12 chr10 20825299 20830479 -124758809 - L1PA10 LINE L1 -11 6157 961 741 158 178 0 chr10 20830481 20830627 -124758661 - AluSc SINE Alu -12 297 126 842 149 0 8 chr10 20831634 20831768 -124757520 + AluSq/x SINE Alu 1 133 -179 277 296 132 13 chr10 20832050 20832202 -124757086 - MIR SINE MIR -73 189 20 2799 67 0 21 chr10 20832385 20832761 -124756527 - L1PA8 LINE L1 -2 6170 5803 389 284 92 7 chr10 20832851 20832992 -124756296 + MIR SINE MIR 107 259 -3 1978 157 13 0 chr10 20833096 20833395 -124755893 + AluSx SINE Alu 1 303 -9 21 0 0 0 chr10 20833723 20833744 -124755544 + AT_rich Low_complexity Low_complexity 1 21 0 292 313 0 25 chr10 20833954 20834034 -124755254 + L2 LINE L2 3186 3263 -9 295 308 20 56 chr10 20834121 20834319 -124754969 - MLT1K LTR MaLR -24 564 374 3868 169 13 4 chr10 20834650 20835348 -124753940 - MER50 LTR ERV1 -30 704 1 354 205 0 0 chr10 20836337 20836415 -124752873 + MADE1 DNA Mariner 3 80 0 2059 118 0 20 chr10 20836512 20836537 -124752751 - AluSx SINE Alu 0 308 284 657 0 0 0 chr10 20836537 20836610 -124752678 + (TTATG)n Simple_repeat Simple_repeat 2 74 0 2059 118 0 20 chr10 20836610 20836898 -124752390 - AluSx SINE Alu -24 284 1 1555 193 33 0 chr10 20836914 20837188 -124752100 - AluJo SINE Alu -29 283 1 219 114 0 0 chr10 20837860 20837895 -124751393 + (TG)n Simple_repeat Simple_repeat 2 36 0 24 0 0 0 chr10 20839350 20839374 -124749914 + AT_rich Low_complexity Low_complexity 1 24 0 306 167 22 11 chr10 20839378 20839468 -124749820 + (TAGA)n Simple_repeat Simple_repeat 1 91 0 344 129 0 57 chr10 20841321 20841413 -124747875 + (TA)n Simple_repeat Simple_repeat 2 87 -31 12792 38 7 0 chr10 20841413 20843744 -124745544 + L1PA5 LINE L1 3805 6146 -8 344 129 0 57 chr10 20843744 20843775 -124745513 + (TA)n Simple_repeat Simple_repeat 87 118 0 2370 124 19 35 chr10 20843883 20844028 -124745260 - THE1B LTR MaLR 0 364 218 2255 115 0 19 chr10 20844028 20844341 -124744947 - AluSg SINE Alu -2 308 2 2370 124 19 35 chr10 20844341 20844565 -124744723 - THE1B LTR MaLR -146 218 1 1826 154 17 30 chr10 20845145 20845443 -124743845 + AluSx SINE Alu 3 296 -16 180 125 0 0 chr10 20845648 20845680 -124743608 + (GA)n Simple_repeat Simple_repeat 2 33 0 1903 195 56 0 chr10 20845680 20846074 -124743214 - MLT2C2 LTR ERVL -48 416 1 202 266 25 13 chr10 20846241 20846320 -124742968 + CT-rich Low_complexity Low_complexity 2 81 0 2866 53 6 3 chr10 20847362 20847747 -124741541 + L1PA8 LINE L1 5794 6179 0 257 242 61 0 chr10 20847794 20847860 -124741428 + GA-rich Low_complexity Low_complexity 1 70 0 2174 169 60 7 chr10 20848073 20848476 -124740812 - MSTA LTR MaLR 0 428 5 360 0 0 0 chr10 20848540 20848580 -124740708 + (CA)n Simple_repeat Simple_repeat 2 41 0 1706 158 40 4 chr10 20849395 20849667 -124739621 + AluJb SINE Alu 1 282 -30 284 226 58 51 chr10 20849867 20850004 -124739284 + Charlie2 DNA MER1_type 67 204 -2658 333 606 0 11 chr10 20850176 20850356 -124738932 + polypyrimidine Low_complexity Low_complexity 3 180 0 249 141 50 50 chr10 20850340 20850461 -124738827 + CT-rich Low_complexity Low_complexity 2 122 0 * 247 335 39 0 chr10 20850515 20850697 -124738591 + Charlie2a DNA MER1_type 1474 1662 -1200 369 277 9 0 chr10 20850720 20850832 -124738456 + Charlie2a DNA MER1_type 2749 2861 -1 2128 148 0 0 chr10 20852197 20852507 -124736781 + AluSx SINE Alu 1 310 -2 1306 218 76 17 chr10 20852812 20853156 -124736132 - MLT1A2 LTR MaLR -6 368 5 711 192 0 0 chr10 20853449 20853574 -124735714 + AluJb SINE Alu 1 125 -187 354 134 0 0 chr10 20854227 20854294 -124734994 + (TCC)n Simple_repeat Simple_repeat 3 69 0 1686 110 3 116 chr10 20854886 20855228 -124734060 - AluSq SINE Alu 0 315 9 328 252 62 86 chr10 20855270 20855480 -124733808 + LTR33 LTR ERVL 12 216 -305 757 155 4 23 chr10 20855555 20855821 -124733467 + CT-rich Low_complexity Low_complexity 1 261 0 429 268 71 11 chr10 20855822 20856005 -124733283 + LTR33 LTR ERVL 327 520 -1 1554 154 30 77 chr10 20856251 20856549 -124732739 + AluSx SINE Alu 1 284 -28 42 0 0 0 chr10 20856572 20856614 -124732674 + AT_rich Low_complexity Low_complexity 1 42 0 1513 225 0 25 chr10 20856910 20857230 -124732058 - AluJo SINE Alu 0 312 1 2319 104 0 3 chr10 20857237 20857546 -124731742 - AluSx SINE Alu -3 309 2 1601 146 30 86 chr10 20857708 20858009 -124731279 + AluSx SINE Alu 1 284 -28 191 159 23 23 chr10 20858129 20858173 -124731115 + MIR3 SINE MIR 156 199 -9 282 200 88 0 chr10 20858590 20858670 -124730618 + FRAM SINE Alu 55 141 -25 281 176 0 0 chr10 20859090 20859141 -124730147 + CT-rich Low_complexity Low_complexity 3 53 0 429 268 71 11 chr10 20859142 20859325 -124729963 + LTR33 LTR ERVL 327 520 -1 1625 148 30 74 chr10 20859571 20859868 -124729420 + AluSx SINE Alu 1 284 -28 191 159 23 23 chr10 20859988 20860032 -124729256 + MIR3 SINE MIR 156 199 -9 615 155 10 10 chr10 20860443 20860546 -124728742 + FRAM SINE Alu 46 148 -28 358 298 85 0 chr10 20861787 20861881 -124727407 - L2 LINE L2 -9 3304 3203 3017 121 76 0 chr10 20862150 20862612 -124726676 - LOR1a LTR ERV1 0 497 1 308 189 15 106 chr10 20863352 20863484 -124725804 - MER5C DNA MER1_type 0 324 205 730 92 0 25 chr10 20863489 20863609 -124725679 + LTR9B LTR ERV1 445 561 -83 712 227 74 0 chr10 20863612 20863815 -124725473 - MER5C DNA MER1_type -106 218 1 4009 149 37 36 chr10 20864316 20865100 -124724188 - LTR1 LTR ERV1 0 785 1 298 265 0 0 chr10 20865409 20865492 -124723796 - L1ME4a LINE L1 -93 6028 5946 697 194 15 15 chr10 20865617 20865818 -124723470 - Charlie1a DNA MER1_type -6 1449 1249 25 51 0 0 chr10 20865818 20865857 -124723431 + AT_rich Low_complexity Low_complexity 1 39 0 2188 144 24 92 chr10 20866051 20866508 -124722780 - MSTB LTR MaLR 0 426 1 328 238 59 0 chr10 20866548 20866649 -124722639 - Charlie1a DNA MER1_type -311 1144 1038 2302 125 59 7 chr10 20866649 20867056 -124722232 + MSTA LTR MaLR 1 428 0 * 2849 215 50 80 chr10 20867056 20868124 -124721164 - Charlie1a DNA MER1_type -417 1038 3 327 85 0 0 chr10 20868128 20868175 -124721113 - MSTB LTR MaLR 0 426 380 1740 169 0 0 chr10 20868175 20868429 -124720859 + AluSx SINE Alu 1 254 -58 255 31 0 0 chr10 20868441 20868473 -124720815 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 1102 99 6 11 chr10 20868476 20868657 -124720631 + (GAA)n Simple_repeat Simple_repeat 1 180 0 204 40 0 0 chr10 20868659 20868684 -124720604 + (CAG)n Simple_repeat Simple_repeat 2 26 0 2072 179 13 5 chr10 20868694 20869080 -124720208 - MSTB LTR MaLR -37 389 1 362 320 88 0 chr10 20869084 20869278 -124720010 - L1ME4a LINE L1 -270 5851 5641 1154 204 82 22 chr10 20869322 20869591 -124719697 + AluJo SINE Alu 1 285 -17 777 76 0 0 chr10 20869592 20869697 -124719591 + (TA)n Simple_repeat Simple_repeat 2 106 0 314 200 33 33 chr10 20870254 20870344 -124718944 - L1MC4 LINE L1 -1340 6702 6613 354 339 15 15 chr10 20873149 20873279 -124716009 - L2 LINE L2 -2 3270 3141 229 307 23 34 chr10 20873277 20873365 -124715923 + MIR3 SINE MIR 116 202 -6 * 1947 168 0 0 chr10 20873378 20873682 -124715606 + AluJo SINE Alu 2 305 -7 1784 170 0 26 chr10 20874514 20874825 -124714463 + AluJo SINE Alu 1 303 -9 1185 144 0 0 chr10 20874967 20875141 -124714147 + FRAM SINE Alu 1 167 -9 4436 197 35 19 chr10 20875802 20876222 -124713066 + L1MB4 LINE L1 4152 4564 -1616 2398 117 11 16 chr10 20876222 20876597 -124712691 + THE1C LTR MaLR 3 375 0 4436 197 35 19 chr10 20876597 20878165 -124711123 + L1MB4 LINE L1 4564 6162 -18 25 0 0 0 chr10 20878171 20878196 -124711092 + AT_rich Low_complexity Low_complexity 1 25 0 472 136 0 0 chr10 20878203 20878284 -124711004 + L1MB8 LINE L1 6097 6177 -1 249 303 0 13 chr10 20880569 20880645 -124708643 + (TG)n Simple_repeat Simple_repeat 2 76 0 198 0 0 0 chr10 20880656 20880678 -124708610 + (TG)n Simple_repeat Simple_repeat 2 23 0 2778 16 0 3 chr10 20880786 20881098 -124708190 - AluY SINE Alu 0 311 1 243 125 0 0 chr10 20881872 20881912 -124707376 + (CA)n Simple_repeat Simple_repeat 1 40 0 1148 154 127 0 chr10 20882427 20882554 -124706734 - L1MA9 LINE L1 -14 6298 6189 252 0 0 0 chr10 20882554 20882582 -124706706 + (TG)n Simple_repeat Simple_repeat 1 28 0 1148 154 127 0 chr10 20882582 20882713 -124706575 - L1MA9 LINE L1 -123 6189 6007 2304 104 0 0 chr10 20883327 20883624 -124705664 - AluSq SINE Alu -16 297 1 962 234 34 75 chr10 20884293 20884762 -124704526 - L1MC5 LINE L1 -90 7871 7422 37 0 0 0 chr10 20884763 20884800 -124704488 + AT_rich Low_complexity Low_complexity 1 37 0 306 299 112 52 chr10 20885838 20886400 -124702888 - MLT1L LTR MaLR -6 609 14 455 269 29 0 chr10 20887467 20887571 -124701717 + U6 snRNA snRNA 1 107 0 23 0 0 0 chr10 20887730 20887753 -124701535 + AT_rich Low_complexity Low_complexity 1 23 0 1833 169 3 3 chr10 20887791 20888098 -124701190 - AluJb SINE Alu -5 307 1 477 256 55 6 chr10 20888112 20888276 -124701012 + L1ME LINE L1 5643 5814 -307 1815 179 117 28 chr10 20888297 20888329 -124700959 - MLT1D LTR MaLR -7 498 470 1459 209 3 10 chr10 20888329 20888450 -124700838 + AluJo SINE Alu 1 121 -191 393 22 0 0 chr10 20888450 20888496 -124700792 + (TAA)n Simple_repeat Simple_repeat 3 48 0 1459 209 3 10 chr10 20888496 20888675 -124700613 + AluJo SINE Alu 121 299 -13 1815 179 117 28 chr10 20888675 20889071 -124700217 - MLT1D LTR MaLR -35 470 32 266 325 25 25 chr10 20890373 20890493 -124698795 + MIR SINE MIR 72 191 -71 393 321 129 5 chr10 20892147 20892340 -124696948 - MIR SINE MIR -1 261 45 811 321 71 42 chr10 20892683 20893299 -124695989 - Tigger8 DNA MER2_type -9 657 24 303 191 22 11 chr10 20893702 20893791 -124695497 + GA-rich Low_complexity Low_complexity 2 91 0 5656 171 20 31 chr10 20894226 20896224 -124693064 - L1PA13 LINE L1 -4 6159 4168 214 203 0 17 chr10 20896644 20896703 -124692585 + T-rich Low_complexity Low_complexity 3 60 0 1157 141 4 98 chr10 20897074 20897308 -124691980 + AluJb SINE Alu 85 296 -16 1894 123 18 21 chr10 20897310 20897623 -124691665 + AluSx SINE Alu 1 312 0 2161 100 0 4 chr10 20898366 20898672 -124690616 + AluSx SINE Alu 2 306 0 525 242 83 0 chr10 20898719 20898839 -124690449 + FLAM_A SINE Alu 1 130 -3 301 306 0 97 chr10 20898986 20899172 -124690116 + MER5A DNA MER1_type 3 170 -19 180 0 0 0 chr10 20899309 20899329 -124689959 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 2115 97 4 4 chr10 20899329 20899607 -124689681 - AluSq SINE Alu -33 280 3 1532 156 0 33 chr10 20899913 20900157 -124689131 + AluJb SINE Alu 1 236 -76 185 83 28 0 chr10 20900182 20900218 -124689070 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 236 196 0 0 chr10 20900222 20900273 -124689015 + LTR66 LTR ERVL 389 439 -171 856 213 6 0 chr10 20900281 20900445 -124688843 + FRAM SINE Alu 1 165 -11 2500 178 83 99 chr10 20900575 20901312 -124687976 + LTR8A LTR ERV1 1 725 -2 1953 146 0 27 chr10 20901399 20901694 -124687594 + AluJb SINE Alu 1 287 -25 1689 172 61 22 chr10 20902365 20902726 -124686562 - THE1C LTR MaLR 0 375 1 2260 156 9 36 chr10 20904735 20905092 -124684196 + L1MB3 LINE L1 5742 6086 -97 1965 155 0 0 chr10 20905092 20905383 -124683905 - AluSx SINE Alu -21 291 1 2260 156 9 36 chr10 20905383 20905475 -124683813 + L1MB3 LINE L1 6086 6179 -4 1425 153 118 38 chr10 20905903 20906190 -124683098 - AluJb SINE Alu -2 310 1 25 31 0 0 chr10 20906558 20906590 -124682698 + AT_rich Low_complexity Low_complexity 1 32 0 8587 248 45 49 chr10 20906635 20909062 -124680226 + L1MB7 LINE L1 2 2439 -4233 1792 159 10 13 chr10 20909062 20909370 -124679918 + AluSx SINE Alu 1 307 -5 8587 248 45 49 chr10 20909370 20911716 -124677572 + L1MB7 LINE L1 2439 4844 -1828 1480 218 70 24 chr10 20911716 20912087 -124677201 + MLT1B LTR MaLR 1 388 -2 8587 248 45 49 chr10 20912087 20913354 -124675934 + L1MB7 LINE L1 4844 6116 -556 2388 172 39 20 chr10 20913359 20913853 -124675435 + L1MB7 LINE L1 6164 6666 -16 2558 138 14 21 chr10 20916466 20916902 -124672386 - Tigger2a DNA MER2_type -1 433 1 516 278 117 24 chr10 20917433 20917638 -124671650 - MIR SINE MIR -27 235 12 186 189 0 0 chr10 20918521 20918558 -124670730 + T-rich Low_complexity Low_complexity 1 37 0 228 235 0 44 chr10 20920273 20920341 -124668947 + A-rich Low_complexity Low_complexity 1 65 0 414 0 0 0 chr10 20920384 20920430 -124668858 + (TG)n Simple_repeat Simple_repeat 2 47 0 335 23 23 0 chr10 20921188 20921232 -124668056 + (CA)n Simple_repeat Simple_repeat 2 46 0 212 294 119 24 chr10 20921716 20921842 -124667446 - L2 LINE L2 -791 2523 2386 296 296 39 58 chr10 20921848 20922054 -124667234 + MLT1J LTR MaLR 1 202 -309 753 268 29 35 chr10 20922085 20922557 -124666731 + L1ME3A LINE L1 5591 6093 -71 648 267 95 30 chr10 20923825 20923957 -124665331 + MIR SINE MIR 15 137 -125 6091 168 36 17 chr10 20923957 20925164 -124664124 - Tigger3b DNA MER2_type -1 1230 1 648 267 95 30 chr10 20925164 20925263 -124664025 + MIR SINE MIR 137 261 -1 1015 123 0 13 chr10 20925714 20925868 -124663420 - AluSg/x SINE Alu -1 309 158 466 225 0 0 chr10 20925868 20925957 -124663331 - MLT1A2 LTR MaLR -281 93 5 192 77 0 0 chr10 20925961 20925987 -124663301 + (TG)n Simple_repeat Simple_repeat 1 26 0 22 103 0 0 chr10 20927057 20927135 -124662153 + AT_rich Low_complexity Low_complexity 1 78 0 24 67 0 0 chr10 20927224 20927269 -124662019 + AT_rich Low_complexity Low_complexity 1 45 0 340 169 0 46 chr10 20927279 20927344 -124661944 - L2 LINE L2 -10 3262 3201 2212 157 53 22 chr10 20927863 20928051 -124661237 + MSTB LTR MaLR 1 182 -244 2278 84 0 0 chr10 20928051 20928360 -124660928 + AluSp SINE Alu 1 309 0 2212 157 53 22 chr10 20928360 20928583 -124660705 + MSTB LTR MaLR 182 426 0 1940 166 10 0 chr10 20929272 20929580 -124659708 + AluSx SINE Alu 1 311 -1 251 289 24 24 chr10 20930040 20930123 -124659165 - MIR SINE MIR -104 158 76 1912 202 6 3 chr10 20930268 20930630 -124658658 + MLT1A1 LTR MaLR 1 363 -2 183 398 43 0 chr10 20931220 20931313 -124657975 + L2 LINE L2 3150 3246 -26 2805 16 0 9 chr10 20931596 20931913 -124657375 - AluYb8 SINE Alu -4 314 1 892 196 108 5 chr10 20933487 20933701 -124655587 + MER46A DNA MER2_type 1 236 0 1275 181 4 4 chr10 20933776 20934030 -124655258 + L1MA6 LINE L1 6047 6300 0 2082 133 13 7 chr10 20934171 20934611 -124654677 + AluSx SINE Alu 1 442 0 574 114 23 8 chr10 20934479 20934792 -124654496 + GA-rich Low_complexity Low_complexity 1 315 0 361 339 101 31 chr10 20934849 20935206 -124654082 + L2 LINE L2 2268 2649 -665 215 381 79 7 chr10 20935467 20935606 -124653682 + L2 LINE L2 3122 3270 -2 1592 145 40 48 chr10 20935724 20936076 -124653212 - LTR23 LTR ERV1 0 437 89 1644 167 52 46 chr10 20936091 20936252 -124653036 + LTR35 LTR ERV1 251 410 -208 2748 191 5 45 chr10 20936252 20936791 -124652497 - MER41D LTR ERV1 0 557 41 1932 116 0 31 chr10 20936791 20937084 -124652204 + AluSc SINE Alu 9 292 -17 2748 191 5 45 chr10 20937084 20937124 -124652164 - MER41D LTR ERV1 -516 41 1 1644 167 52 46 chr10 20937124 20937168 -124652120 + LTR35 LTR ERV1 410 452 -166 2188 96 23 0 chr10 20937168 20937469 -124651819 - AluSg SINE Alu -2 308 1 1644 167 52 46 chr10 20937469 20937628 -124651660 + LTR35 LTR ERV1 452 618 0 1099 308 70 35 chr10 20937654 20938282 -124651006 + L1ME3A LINE L1 11 728 -6131 1887 112 32 18 chr10 20938282 20938560 -124650728 - AluSx SINE Alu -28 284 3 1099 308 70 35 chr10 20938560 20938643 -124650645 + L1ME3A LINE L1 728 807 -6052 2184 112 0 3 chr10 20938650 20938953 -124650335 + AluSx SINE Alu 1 302 -10 1351 194 48 35 chr10 20939030 20939319 -124649969 + AluJo SINE Alu 14 306 -6 1719 240 63 63 chr10 20939322 20940570 -124648718 + L1ME3A LINE L1 858 2099 -4833 1397 229 16 10 chr10 20940569 20940957 -124648331 + L1ME3A LINE L1 3540 3929 -3028 * 454 280 153 50 chr10 20941062 20941803 -124647485 + L1ME3A LINE L1 4967 5837 -1120 2100 167 17 0 chr10 20941803 20942163 -124647125 + MER47A DNA MER2_type 1 366 0 454 280 153 50 chr10 20942163 20942408 -124646880 + L1ME3A LINE L1 5837 6055 -902 1408 190 38 19 chr10 20942414 20942677 -124646611 - AluJb SINE Alu -44 268 1 396 192 39 128 chr10 20942724 20942927 -124646361 + L1ME3A LINE L1 6129 6313 -660 866 184 37 32 chr10 20942927 20943117 -124646171 + MLT1A2 LTR MaLR 1 191 -183 321 188 0 0 chr10 20943117 20943197 -124646091 + CT-rich Low_complexity Low_complexity 1 80 0 759 231 22 11 chr10 20943227 20943409 -124645879 + MLT1A2 LTR MaLR 191 374 0 251 246 264 0 chr10 20943450 20943560 -124645728 + L1ME3A LINE L1 6311 6449 -532 261 0 0 0 chr10 20943595 20943624 -124645664 + (TA)n Simple_repeat Simple_repeat 2 30 0 367 249 108 58 chr10 20943653 20943894 -124645394 + L1ME3A LINE L1 6467 6719 -262 3231 201 31 57 chr10 20946111 20946941 -124642347 - L1MB7 LINE L1 -51 6631 5842 4401 182 14 13 chr10 20946941 20947733 -124641555 - MER54B LTR ERVL 0 793 1 3231 201 31 57 chr10 20947733 20948040 -124641248 - L1MB7 LINE L1 -840 5842 5529 1151 218 40 30 chr10 20948039 20948443 -124640845 - L1MB7 LINE L1 -4896 1646 1239 * 22 35 0 0 chr10 20948794 20948823 -124640465 + AT_rich Low_complexity Low_complexity 1 29 0 2267 113 0 0 chr10 20949792 20950093 -124639195 + AluSx SINE Alu 1 301 -11 1310 208 27 67 chr10 20950591 20950799 -124638489 - MLT1A2 LTR MaLR -11 363 175 2136 126 7 0 chr10 20950799 20951101 -124638187 - AluSx SINE Alu -6 306 3 1310 208 27 67 chr10 20951101 20951267 -124638021 - MLT1A2 LTR MaLR -199 175 4 27 29 0 0 chr10 20951538 20951572 -124637716 + AT_rich Low_complexity Low_complexity 1 34 0 1560 211 10 7 chr10 20951574 20951873 -124637415 - AluJb SINE Alu -10 302 3 1911 179 47 28 chr10 20951905 20952454 -124636834 + MLT2A1 LTR ERVL 1 554 0 201 254 0 0 chr10 20953215 20953274 -124636014 + (TA)n Simple_repeat Simple_repeat 2 60 0 278 26 26 0 chr10 20953276 20953315 -124635973 + (GA)n Simple_repeat Simple_repeat 1 40 0 538 175 24 63 chr10 20955234 20955395 -124633893 - FLAM_A SINE Alu 0 133 1 1291 278 55 80 chr10 20955613 20956917 -124632371 - L1MEc LINE L1 -4310 2812 1541 279 79 0 0 chr10 20956922 20956960 -124632328 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 790 201 0 20 chr10 20956964 20957113 -124632175 - FRAM SINE Alu -30 146 1 935 288 53 12 chr10 20957114 20957454 -124631834 - L1MEc LINE L1 -5091 1332 979 1740 184 33 50 chr10 20957822 20958219 -124631069 + MLT1B LTR MaLR 1 390 0 4584 66 12 0 chr10 20958512 20959408 -124629880 + L1P3 LINE L1 4756 5657 -497 234 255 0 0 chr10 20959825 20959876 -124629412 - MIR SINE MIR -28 234 184 822 148 30 108 chr10 20959898 20959965 -124629323 - MER3 DNA MER1_type -13 196 125 5584 115 19 7 chr10 20959965 20960984 -124628304 - L1PA13 LINE L1 -5 6158 5131 822 148 30 108 chr10 20960984 20961119 -124628169 - MER3 DNA MER1_type -84 125 10 2466 81 0 3 chr10 20961171 20961481 -124627807 + AluY SINE Alu 1 309 -2 2017 122 0 20 chr10 20961918 20962222 -124627066 + AluSx SINE Alu 1 298 -14 183 269 167 28 chr10 20962633 20962741 -124626547 + L2 LINE L2 3190 3312 -1 817 195 39 5 chr10 20963090 20963271 -124626017 - L1MA9 LINE L1 -364 5948 5775 263 128 49 61 chr10 20963277 20963441 -124625847 + (TA)n Simple_repeat Simple_repeat 2 163 0 2510 167 4 17 chr10 20963482 20963954 -124625334 - L1MA9 LINE L1 -543 5769 5304 2181 64 0 4 chr10 20964045 20964311 -124624977 - AluY SINE Alu -19 292 28 201 147 0 0 chr10 20964348 20964382 -124624906 + (CATATA)n Simple_repeat Simple_repeat 2 35 0 1969 102 39 14 chr10 20964522 20964807 -124624481 + AluSc SINE Alu 1 292 -17 1686 154 34 27 chr10 20964837 20964955 -124624333 + AluJo SINE Alu 10 126 -186 216 0 0 0 chr10 20964955 20964979 -124624309 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1686 154 34 27 chr10 20964979 20965152 -124624136 + AluJo SINE Alu 126 303 -9 206 214 0 0 chr10 20965239 20965281 -124624007 + GA-rich Low_complexity Low_complexity 1 42 0 187 273 78 78 chr10 20965576 20965704 -124623584 - L3b LINE CR1 -336 1247 1120 475 202 87 60 chr10 20968359 20968577 -124620711 - L1M4 LINE L1 -1357 4789 4566 2353 107 7 0 chr10 20968672 20968982 -124620306 - AluSx SINE Alu 0 312 1 396 336 46 23 chr10 20969922 20970139 -124619149 + L2 LINE L2 2545 2766 -548 225 0 0 0 chr10 20970277 20970302 -124618986 + (T)n Simple_repeat Simple_repeat 1 25 0 1250 130 4 15 chr10 20970634 20970873 -124618415 + AluY SINE Alu 1 301 -10 311 274 75 9 chr10 20971622 20971728 -124617560 + MLT1K LTR MaLR 1 113 -475 374 218 0 163 chr10 20972063 20972210 -124617078 + L2 LINE L2 3182 3304 -9 3132 129 35 0 chr10 20972550 20973062 -124616226 - L1PA13 LINE L1 0 6163 5634 240 128 0 0 chr10 20973048 20973087 -124616201 + L1PA13 LINE L1 5617 5655 -506 191 208 21 42 chr10 20973336 20973384 -124615904 + L2 LINE L2 3261 3307 -6 380 255 52 46 chr10 20973969 20974122 -124615166 + MIR SINE MIR 12 165 -97 303 71 0 0 chr10 20975436 20975478 -124613810 + (GA)n Simple_repeat Simple_repeat 2 43 0 338 333 94 66 chr10 20975862 20976180 -124613108 - L2 LINE L2 0 3272 2946 241 171 0 0 chr10 20976310 20976351 -124612937 - Alu SINE Alu -259 43 3 1835 165 0 16 chr10 20977014 20977317 -124611971 + AluJo SINE Alu 3 300 -12 233 296 0 0 chr10 20978011 20978065 -124611223 + L2 LINE L2 3252 3305 -8 225 0 0 0 chr10 20978508 20978533 -124610755 + (GA)n Simple_repeat Simple_repeat 1 25 0 * 393 22 0 0 chr10 20978532 20978578 -124610710 + (TG)n Simple_repeat Simple_repeat 2 47 0 1319 154 158 12 chr10 20979109 20979384 -124609904 - AluJo SINE Alu 0 312 2 2068 142 0 0 chr10 20980026 20980328 -124608960 + AluSq SINE Alu 1 302 -11 1459 99 54 18 chr10 20980377 20980598 -124608690 - MER30 DNA MER1_type -1 229 1 356 317 69 7 chr10 20980614 20980759 -124608529 + MIR SINE MIR 25 178 -84 252 281 118 37 chr10 20981456 20981591 -124607697 - MIR3 SINE MIR -5 203 58 21 36 0 0 chr10 20981615 20981643 -124607645 + AT_rich Low_complexity Low_complexity 1 28 0 310 313 62 39 chr10 20982525 20982704 -124606584 - L1ME4a LINE L1 -1 6120 5938 624 258 66 1 chr10 20982713 20982905 -124606383 + MIR SINE MIR 61 262 0 989 207 0 11 chr10 20983116 20983304 -124605984 + AluJb SINE Alu 1 186 -126 21 0 0 0 chr10 20984113 20984134 -124605154 + AT_rich Low_complexity Low_complexity 1 21 0 2736 154 29 10 chr10 20984683 20985201 -124604087 + L1MA4A LINE L1 5774 6301 -2 189 0 0 0 chr10 20985693 20985714 -124603574 + (TTTTTA)n Simple_repeat Simple_repeat 2 22 0 1653 155 54 30 chr10 20985719 20986016 -124603272 - AluJo SINE Alu -8 304 1 188 302 0 0 chr10 20986244 20986297 -124602991 + MIR SINE MIR 94 146 -62 2108 202 29 27 chr10 20986639 20987124 -124602164 - MER66B LTR ERV1 0 486 1 2016 122 48 14 chr10 20987914 20988266 -124601022 - THE1B LTR MaLR 0 364 1 547 256 119 0 chr10 20988589 20988757 -124600531 + MER5A DNA MER1_type 1 188 -1 398 341 83 18 chr10 20988821 20989050 -124600238 - MIR SINE MIR -4 258 15 616 128 0 0 chr10 20989160 20989246 -124600042 + AluJ/FLAM SINE Alu 1 86 -226 21 36 0 0 chr10 20989253 20989281 -124600007 + AT_rich Low_complexity Low_complexity 1 28 0 2082 147 33 14 chr10 20990522 20990890 -124598398 + THE1C LTR MaLR 1 375 0 2070 144 0 7 chr10 20992663 20992969 -124596319 - AluSx SINE Alu -7 305 2 322 195 184 0 chr10 20993138 20993225 -124596063 + MER5A DNA MER1_type 10 112 -77 1883 132 3 66 chr10 20993245 20993578 -124595710 + AluJb SINE Alu 1 312 0 738 189 0 0 chr10 20994512 20994678 -124594610 - FLAM_C SINE Alu 0 166 1 908 185 49 0 chr10 20995498 20995682 -124593606 + MER20 DNA MER1_type 1 193 -26 21 0 0 0 chr10 20996065 20996086 -124593202 + AT_rich Low_complexity Low_complexity 1 21 0 350 231 135 19 chr10 20996161 20996265 -124593023 + L2 LINE L2 3190 3305 -8 180 0 0 0 chr10 20996349 20996369 -124592919 + (TTG)n Simple_repeat Simple_repeat 2 21 0 333 330 9 9 chr10 20996501 20996607 -124592681 + MIR SINE MIR 36 141 -67 1342 171 4 0 chr10 20996616 20996850 -124592438 - MER46A DNA MER2_type 0 236 2 2220 112 0 31 chr10 20996926 20997247 -124592041 + AluY SINE Alu 1 311 0 486 46 0 0 chr10 20997478 20997543 -124591745 + (CA)n Simple_repeat Simple_repeat 2 66 0 424 297 126 16 chr10 20998127 20998309 -124590979 - MIR SINE MIR 0 262 61 321 339 55 0 chr10 20999418 20999545 -124589743 + L2 LINE L2 3138 3271 -1 1909 181 79 10 chr10 20999942 21000142 -124589146 - MSTB1 LTR MaLR 0 432 247 315 49 0 0 chr10 21000142 21000183 -124589105 + (GA)n Simple_repeat Simple_repeat 1 41 0 1909 181 79 10 chr10 21000183 21000367 -124588921 - MSTB1 LTR MaLR -185 247 16 240 43 43 21 chr10 21000367 21000414 -124588874 + (CAAA)n Simple_repeat Simple_repeat 2 49 0 1909 181 79 10 chr10 21000414 21000432 -124588856 - MSTB1 LTR MaLR -416 16 1 181 319 0 0 chr10 21000759 21000806 -124588482 - L3b LINE CR1 -9 1574 1528 2033 140 7 0 chr10 21000859 21001152 -124588136 - AluSx SINE Alu -17 295 1 307 211 28 162 chr10 21001702 21001844 -124587444 + L2 LINE L2 3143 3265 -7 2259 103 0 31 chr10 21002135 21002456 -124586832 - AluSx SINE Alu 0 312 2 23 33 0 0 chr10 21003245 21003275 -124586013 + AT_rich Low_complexity Low_complexity 1 30 0 256 288 41 0 chr10 21003504 21003577 -124585711 - L2 LINE L2 -1 3312 3237 1347 191 61 22 chr10 21005148 21005426 -124583862 - AluJo SINE Alu -23 289 1 23 33 0 0 chr10 21005638 21005668 -124583620 + AT_rich Low_complexity Low_complexity 1 30 0 181 324 73 29 chr10 21005788 21005856 -124583432 - L2 LINE L2 -18 3295 3225 1255 192 71 47 chr10 21007320 21007684 -124581604 - MLT1D LTR MaLR -42 463 91 3272 193 13 44 chr10 21007707 21008187 -124581101 - LTR39 LTR ERV1 0 783 336 2058 140 10 0 chr10 21008187 21008487 -124580801 - AluSq SINE Alu -10 303 1 3272 193 13 44 chr10 21008487 21008795 -124580493 - LTR39 LTR ERV1 -447 336 20 234 234 47 0 chr10 21008784 21008848 -124580440 - MLT1D LTR MaLR -192 313 247 * 23 0 0 0 chr10 21009196 21009219 -124580069 + AT_rich Low_complexity Low_complexity 1 23 0 1328 145 4 4 chr10 21009239 21009466 -124579822 - L1PA15 LINE L1 -7 6158 5932 1680 153 0 81 chr10 21010243 21010576 -124578712 + AluJb SINE Alu 7 312 0 230 160 20 0 chr10 21010577 21010627 -124578661 + GA-rich Low_complexity Low_complexity 3 53 0 235 289 67 19 chr10 21010639 21010743 -124578545 + MIR SINE MIR 106 214 -48 33 85 0 0 chr10 21010743 21010825 -124578463 + AT_rich Low_complexity Low_complexity 1 82 0 21 36 0 0 chr10 21010894 21010922 -124578366 + AT_rich Low_complexity Low_complexity 1 28 0 215 211 0 19 chr10 21011533 21011549 -124577739 + (CTA)n Simple_repeat Simple_repeat 1 16 -35 2301 114 0 0 chr10 21011549 21011848 -124577440 - AluSx SINE Alu -13 299 1 215 211 0 19 chr10 21011848 21011883 -124577405 + (CTA)n Simple_repeat Simple_repeat 16 51 0 469 297 110 38 chr10 21011955 21012164 -124577124 - MIR SINE MIR -13 249 26 2008 84 18 25 chr10 21012745 21013031 -124576257 + AluSq SINE Alu 26 309 -4 429 303 21 28 chr10 21013037 21013179 -124576109 + L2 LINE L2 3172 3312 -1 857 189 0 51 chr10 21014531 21014706 -124574582 - FRAM SINE Alu 0 166 1 198 340 134 43 chr10 21015804 21016013 -124573275 - L2 LINE L2 -219 3053 2826 198 402 0 0 chr10 21016077 21016164 -124573124 + L3 LINE CR1 1469 1555 -22 1386 99 0 11 chr10 21017566 21017747 -124571541 + AluSg/x SINE Alu 127 305 -7 189 0 0 0 chr10 21017747 21017768 -124571520 + (GA)n Simple_repeat Simple_repeat 2 22 0 244 189 27 0 chr10 21018315 21018389 -124570899 + GA-rich Low_complexity Low_complexity 1 76 0 518 301 142 28 chr10 21018494 21018889 -124570399 + MLT1J LTR MaLR 23 462 -49 776 203 7 20 chr10 21019328 21019476 -124569812 - FRAM SINE Alu -19 157 12 199 255 0 0 chr10 21020430 21020477 -124568811 + L2 LINE L2 3216 3262 -10 188 300 0 0 chr10 21020603 21020643 -124568645 - MIR SINE MIR -18 244 205 1643 173 14 38 chr10 21021381 21021728 -124567560 - MER44D DNA MER2_type 0 609 1 2159 137 0 0 chr10 21022238 21022538 -124566750 - AluSx SINE Alu -12 300 1 183 323 32 43 chr10 21023564 21023657 -124565631 - MIR SINE MIR -142 120 29 395 328 101 21 chr10 21023716 21023954 -124565334 + L3 LINE CR1 764 1020 -557 180 77 0 0 chr10 21023999 21024025 -124565263 + (TTTTTG)n Simple_repeat Simple_repeat 2 27 0 2562 50 0 19 chr10 21024067 21024384 -124564904 - AluY SINE Alu 0 311 1 376 209 45 68 chr10 21024987 21025007 -124564281 - Charlie1b DNA MER1_type -2259 502 483 1849 135 26 32 chr10 21025007 21025319 -124563969 - AluJb SINE Alu -2 310 1 376 209 45 68 chr10 21025319 21025475 -124563813 - Charlie1b DNA MER1_type -2278 483 330 10312 28 2 0 chr10 21025479 21027473 -124561815 - L1PA3 LINE L1 0 6155 4155 3438 30 2 0 chr10 21027473 21027901 -124561387 + L1PA3 LINE L1 3715 4143 -2003 1055 237 73 19 chr10 21027901 21028218 -124561070 - Charlie1b DNA MER1_type -188 335 2 2281 119 0 3 chr10 21028361 21028671 -124560617 + AluSx SINE Alu 1 309 -3 29 0 0 0 chr10 21030325 21030354 -124558934 + AT_rich Low_complexity Low_complexity 1 29 0 422 266 111 29 chr10 21030947 21031154 -124558134 - MIR SINE MIR -19 243 20 25 0 0 0 chr10 21031338 21031363 -124557925 + AT_rich Low_complexity Low_complexity 1 25 0 1593 150 0 7 chr10 21031363 21031636 -124557652 - L1PA16 LINE L1 -3 6163 5893 1046 76 0 0 chr10 21031665 21031797 -124557491 - AluY SINE Alu -179 132 1 261 0 0 0 chr10 21031799 21031828 -124557460 + (T)n Simple_repeat Simple_repeat 1 29 0 23 0 0 0 chr10 21031879 21031902 -124557386 + AT_rich Low_complexity Low_complexity 1 23 0 760 244 77 27 chr10 21033313 21033534 -124555754 - MIR SINE MIR -28 234 3 200 57 0 29 chr10 21035351 21035386 -124553902 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 24 53 0 0 chr10 21035645 21035683 -124553605 + AT_rich Low_complexity Low_complexity 1 38 0 235 98 0 0 chr10 21035765 21035806 -124553482 - L1PA7 LINE L1 -3 6151 6111 * 3631 62 10 0 chr10 21035799 21036285 -124553003 + L1PA7 LINE L1 5389 5879 -275 832 212 24 91 chr10 21036467 21036807 -124552481 - MER33 DNA MER1_type -7 317 1 954 154 6 30 chr10 21036896 21037065 -124552223 + FRAM SINE Alu 1 165 -11 202 276 121 20 chr10 21037451 21037644 -124551644 + MIR SINE MIR 8 260 -2 649 317 55 39 chr10 21037877 21038189 -124551099 + L2 LINE L2 2961 3277 -36 2382 85 3 19 chr10 21038350 21038667 -124550621 - AluSp SINE Alu -1 312 1 300 314 12 0 chr10 21038826 21038912 -124550376 - MIR SINE MIR -67 141 55 24 32 0 0 chr10 21038979 21039010 -124550278 + AT_rich Low_complexity Low_complexity 1 31 0 26 64 0 0 chr10 21039168 21039215 -124550073 + AT_rich Low_complexity Low_complexity 1 47 0 613 146 0 0 chr10 21039312 21039415 -124549873 - L1PA16 LINE L1 0 6166 6064 11858 175 12 7 chr10 21041730 21042097 -124547191 - L1PB1 LINE L1 0 6867 6503 329 0 0 24 chr10 21042097 21042139 -124547149 + (TG)n Simple_repeat Simple_repeat 2 42 0 198 103 0 0 chr10 21042143 21042172 -124547116 + (TA)n Simple_repeat Simple_repeat 2 30 0 11858 175 12 7 chr10 21042172 21043534 -124545754 - L1PB1 LINE L1 -366 6501 5148 216 0 0 0 chr10 21043534 21043558 -124545730 + (TTTTA)n Simple_repeat Simple_repeat 4 27 0 11858 175 12 7 chr10 21043558 21045462 -124543826 - L1PB1 LINE L1 -1719 5148 3208 1007 123 17 102 chr10 21045472 21045708 -124543580 - L1PB1 LINE L1 -6014 849 634 1113 152 10 0 chr10 21045708 21045906 -124543382 - L1PB1 LINE L1 -6663 200 1 677 240 45 54 chr10 21047037 21047279 -124542009 - L2 LINE L2 -1 3312 3073 218 189 0 19 chr10 21047292 21047327 -124541961 + (TG)n Simple_repeat Simple_repeat 2 37 -16 2405 215 35 13 chr10 21047327 21047872 -124541416 - MER74A LTR ERVL 0 558 2 218 189 0 19 chr10 21047872 21047889 -124541399 + (TG)n Simple_repeat Simple_repeat 37 53 0 207 298 0 18 chr10 21047892 21047949 -124541339 - L2 LINE L2 -239 3074 3019 245 271 24 0 chr10 21048823 21048908 -124540380 - Charlie2 DNA MER1_type 0 2862 2776 239 284 112 9 chr10 21048975 21049091 -124540197 + L2 LINE L2 2481 2608 -706 418 266 26 53 chr10 21049261 21049603 -124539685 - Charlie2 DNA MER1_type -300 2562 2230 287 238 36 0 chr10 21049649 21049733 -124539555 - Charlie2 DNA MER1_type -2471 311 225 231 143 0 0 chr10 21050929 21050964 -124538324 - MIR SINE MIR -21 241 207 243 0 0 0 chr10 21051291 21051318 -124537970 + (TA)n Simple_repeat Simple_repeat 1 27 0 454 257 33 20 chr10 21051430 21051582 -124537706 - MIR SINE MIR 0 262 109 207 0 0 0 chr10 21051714 21051737 -124537551 + (T)n Simple_repeat Simple_repeat 1 23 0 2046 142 3 3 chr10 21051851 21052161 -124537127 + AluSg SINE Alu 1 310 0 436 275 104 28 chr10 21052689 21052871 -124536417 - MIR3 SINE MIR -3 205 10 1059 169 135 82 chr10 21054244 21054599 -124534689 + THE1C LTR MaLR 1 374 -1 198 156 0 0 chr10 21055038 21055083 -124534205 + (CA)n Simple_repeat Simple_repeat 2 46 0 608 188 0 14 chr10 21055147 21055291 -124533997 + GA-rich Low_complexity Low_complexity 3 144 0 258 314 32 51 chr10 21055743 21055899 -124533389 - MIR SINE MIR -47 215 63 1870 225 63 33 chr10 21055932 21056765 -124532523 - L1MDa LINE L1 -3700 2840 1984 468 306 11 6 chr10 21056778 21056958 -124532330 - L1MDa LINE L1 -6359 181 1 231 114 0 0 chr10 21056979 21057014 -124532274 + (GAA)n Simple_repeat Simple_repeat 2 36 0 1939 121 9 65 chr10 21057249 21057571 -124531717 - AluSx SINE Alu -8 304 1 217 286 231 39 chr10 21057661 21057843 -124531445 - MIR SINE MIR 0 262 46 217 305 99 33 chr10 21060951 21061102 -124528186 + L3 LINE CR1 1203 1363 -214 1341 137 85 102 chr10 21061357 21061759 -124527529 + LTR1 LTR ERV1 12 406 -379 411 202 0 12 chr10 21061759 21061843 -124527445 - 7SLRNA srpRNA srpRNA -236 84 2 704 211 0 0 chr10 21061847 21061980 -124527308 - FLAM_C SINE Alu 0 133 1 185 65 32 0 chr10 21062032 21062063 -124527225 + (TTTTA)n Simple_repeat Simple_repeat 2 33 0 1180 198 40 36 chr10 21062068 21062320 -124526968 - AluJo SINE Alu -30 282 30 307 264 33 74 chr10 21062836 21062957 -124526331 + MER91A DNA MER1_type 18 133 -63 2138 118 7 10 chr10 21062975 21063281 -124526007 - AluSx SINE Alu -7 305 1 184 29 29 29 chr10 21064410 21064444 -124524844 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 1467 174 34 4 chr10 21064913 21065178 -124524110 + AluJo SINE Alu 10 282 -30 185 333 0 0 chr10 21065874 21065931 -124523357 + MIR SINE MIR 91 147 -115 203 182 23 0 chr10 21068198 21068242 -124521046 + (TTCA)n Simple_repeat Simple_repeat 1 45 0 2315 80 3 16 chr10 21068542 21068855 -124520433 + AluSc SINE Alu 1 309 0 2047 112 13 0 chr10 21069013 21069325 -124519963 - L1PB3 LINE L1 -184 5970 5655 2253 129 0 0 chr10 21069780 21070083 -124519205 - AluSx SINE Alu -7 305 3 849 125 7 29 chr10 21070123 21070259 -124519029 + AluSq/x SINE Alu 1 133 -179 231 229 14 14 chr10 21071681 21071715 -124517573 + GA-rich Low_complexity Low_complexity 3 36 -36 1967 141 3 7 chr10 21071715 21072021 -124517267 + AluSx SINE Alu 6 310 -2 231 229 14 14 chr10 21072021 21072056 -124517232 + GA-rich Low_complexity Low_complexity 35 72 0 252 0 0 0 chr10 21072983 21073011 -124516277 + (TG)n Simple_repeat Simple_repeat 2 29 0 202 358 11 0 chr10 21074120 21074215 -124515073 + MIR SINE MIR 46 141 -121 258 170 0 0 chr10 21074380 21074394 -124514894 + (CA)n Simple_repeat Simple_repeat 2 15 -39 2121 120 0 0 chr10 21074394 21074693 -124514595 + AluSg1 SINE Alu 11 309 0 258 170 0 0 chr10 21074693 21074731 -124514557 + (CA)n Simple_repeat Simple_repeat 14 54 0 716 158 23 12 chr10 21074801 21074972 -124514316 + GA-rich Low_complexity Low_complexity 1 173 0 552 229 86 70 chr10 21077109 21077353 -124511935 - L1ME3A LINE L1 0 6170 5923 1108 229 5 0 chr10 21077353 21077576 -124511712 - MER58A DNA MER1_type 0 224 1 675 227 7 32 chr10 21077618 21077772 -124511516 - MER63A DNA MER1_type -3 207 58 218 226 38 0 chr10 21077826 21077879 -124511409 + MIR SINE MIR 94 148 -114 357 24 0 0 chr10 21078572 21078614 -124510674 + (TA)n Simple_repeat Simple_repeat 2 43 0 1954 174 100 3 chr10 21079333 21079723 -124509565 - MSTA LTR MaLR 0 428 1 22 0 0 0 chr10 21081316 21081338 -124507950 + AT_rich Low_complexity Low_complexity 1 22 0 352 303 139 56 chr10 21083091 21083358 -124505930 + L3b LINE CR1 1202 1490 -93 2001 140 3 16 chr10 21083511 21083826 -124505462 + AluSx SINE Alu 1 311 -1 2065 154 35 35 chr10 21085500 21085699 -124503589 - MER57A LTR ERV1 0 403 205 2268 86 0 3 chr10 21085699 21086013 -124503275 + AluSq SINE Alu 1 313 0 2065 154 35 35 chr10 21086013 21086216 -124503072 - MER57A LTR ERV1 -197 206 1 519 182 6 116 chr10 21087439 21087608 -124501680 + MLT1D LTR MaLR 18 166 -339 1906 147 23 14 chr10 21087608 21088043 -124501245 - MER1A DNA MER1_type 0 533 1 1094 211 92 57 chr10 21088043 21088370 -124500918 + MLT1D LTR MaLR 160 498 -7 335 322 50 8 chr10 21088382 21088503 -124500785 + MIR SINE MIR 8 133 -129 284 155 0 17 chr10 21088695 21088753 -124500535 + CT-rich Low_complexity Low_complexity 2 58 0 216 97 0 0 chr10 21089405 21089436 -124499852 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 220 336 40 27 chr10 21089647 21089796 -124499492 + MIR SINE MIR 28 178 -84 2024 111 62 0 chr10 21089893 21090181 -124499107 + AluSc SINE Alu 1 306 -3 5722 177 30 25 chr10 21091012 21093187 -124496101 + L1PA16 LINE L1 3956 6157 -9 21 36 0 0 chr10 21093187 21093215 -124496073 + AT_rich Low_complexity Low_complexity 1 28 0 200 206 0 0 chr10 21093240 21093274 -124496014 + polypyrimidine Low_complexity Low_complexity 3 36 0 22 0 0 0 chr10 21093915 21093937 -124495351 + AT_rich Low_complexity Low_complexity 1 22 0 1475 99 0 5 chr10 21093958 21094150 -124495138 - AluSx SINE Alu -75 237 47 203 314 172 6 chr10 21094254 21094423 -124494865 - L2 LINE L2 -627 2687 2491 24 32 0 0 chr10 21095624 21095655 -124493633 + AT_rich Low_complexity Low_complexity 1 31 0 379 88 0 0 chr10 21096110 21096167 -124493121 - AluJo SINE Alu 0 302 246 984 186 5 42 chr10 21096170 21096363 -124492925 - AluJo SINE Alu -126 186 1 290 305 55 23 chr10 21096579 21096707 -124492581 + MIR SINE MIR 117 248 -14 2154 114 10 0 chr10 21096828 21097118 -124492170 + AluSq SINE Alu 1 293 -20 648 197 87 6 chr10 21097337 21097520 -124491768 + Charlie5 DNA MER1_type 2388 2585 -27 243 325 0 48 chr10 21097690 21097773 -124491515 + L2 LINE L2 3192 3270 -43 476 274 97 37 chr10 21098527 21098848 -124490440 - L1MC4a LINE L1 -308 5813 5542 216 0 0 0 chr10 21099846 21099870 -124489418 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 203 321 36 0 chr10 21100142 21100198 -124489090 - MIR SINE MIR -64 144 87 1324 216 7 28 chr10 21101106 21101393 -124487895 + AluJo SINE Alu 1 281 -31 189 0 0 0 chr10 21101418 21101439 -124487849 + (TAAAA)n Simple_repeat Simple_repeat 4 24 0 230 281 0 0 chr10 21101548 21101605 -124487683 + CT-rich Low_complexity Low_complexity 3 59 0 186 43 0 0 chr10 21103363 21103386 -124485902 + (T)n Simple_repeat Simple_repeat 1 23 0 1980 112 7 3 chr10 21103415 21103719 -124485569 - AluY SINE Alu -6 305 1 2186 73 0 20 chr10 21103741 21104041 -124485247 + AluY SINE Alu 9 302 -9 811 21 0 0 chr10 21104412 21104506 -124484782 - L1PA4 LINE L1 -379 5776 5683 3051 43 3 0 chr10 21104506 21104877 -124484411 + L1PA4 LINE L1 5779 6153 -2 626 239 38 38 chr10 21105097 21105281 -124484007 + MER63A DNA MER1_type 1 184 -26 351 241 15 83 chr10 21105697 21105830 -124483458 + L2 LINE L2 3122 3245 -27 609 300 14 14 chr10 21105832 21106042 -124483246 + LTR16A LTR ERVL 211 420 -30 383 243 0 23 chr10 21107161 21107334 -124481954 + (TA)n Simple_repeat Simple_repeat 1 169 0 358 229 33 0 chr10 21107348 21107501 -124481787 + (TA)n Simple_repeat Simple_repeat 1 158 0 790 296 102 42 chr10 21108961 21109345 -124479943 + L3 LINE CR1 1143 1553 -24 1936 131 3 3 chr10 21109345 21109642 -124479646 - AluSx SINE Alu -15 297 1 790 296 102 42 chr10 21109642 21109659 -124479629 + L3 LINE CR1 1553 1568 -9 183 218 36 55 chr10 21112726 21112781 -124476507 - L2 LINE L2 0 3272 3219 2143 204 17 0 chr10 21113227 21113639 -124475649 + L1PA15 LINE L1 5746 6164 -1 435 174 0 0 chr10 21114252 21114338 -124474950 + (TA)n Simple_repeat Simple_repeat 1 86 0 241 119 0 0 chr10 21114343 21114385 -124474903 - LTR66 LTR ERVL -175 435 394 198 143 0 0 chr10 21114385 21114420 -124474868 + (TA)n Simple_repeat Simple_repeat 2 36 0 303 293 181 17 chr10 21115697 21115813 -124473475 + L2 LINE L2 3138 3272 0 503 226 51 69 chr10 21116066 21116202 -124473086 - HAL1 LINE L1 -109 2398 2265 2292 60 0 14 chr10 21116202 21116524 -124472764 + AluY SINE Alu 1 318 0 503 226 51 69 chr10 21116524 21116603 -124472685 - HAL1 LINE L1 -242 2265 2186 1918 259 78 57 chr10 21116666 21116795 -124472493 - HAL1 LINE L1 -707 1800 1675 1859 124 4 0 chr10 21116795 21117052 -124472236 + AluSx SINE Alu 45 302 -10 1918 259 78 57 chr10 21117052 21117233 -124472055 - HAL1 LINE L1 -832 1675 1499 2259 107 0 3 chr10 21117233 21117543 -124471745 - AluSg SINE Alu -1 309 1 1918 259 78 57 chr10 21117543 21118213 -124471075 - HAL1 LINE L1 -1008 1499 798 378 250 34 0 chr10 21118285 21118373 -124470915 + MER5A DNA MER1_type 9 99 -90 409 256 15 38 chr10 21118410 21118543 -124470745 - HAL1 LINE L1 -1839 668 539 1677 215 8 32 chr10 21118590 21118962 -124470326 - MLT1A2 LTR MaLR -11 363 1 315 167 106 15 chr10 21118970 21119036 -124470252 - HAL1 LINE L1 -2029 478 407 300 354 27 0 chr10 21119141 21119288 -124470000 - HAL1 LINE L1 -2355 152 2 186 274 118 0 chr10 21120286 21120337 -124468951 + L2 LINE L2 3242 3298 -15 1741 161 25 0 chr10 21120412 21120697 -124468591 - AluSx SINE Alu -15 297 6 854 198 16 21 chr10 21121406 21121593 -124467695 - MLT1A2 LTR MaLR 0 374 189 437 306 0 61 chr10 21121739 21121919 -124467369 - MLT1A2 LTR MaLR -205 169 1 249 53 79 0 chr10 21122372 21122410 -124466878 - MIR SINE MIR -67 141 101 278 279 10 29 chr10 21124749 21124853 -124464435 + MER5A DNA MER1_type 4 105 -84 194 266 0 24 chr10 21125754 21125882 -124463406 + MER5A DNA MER1_type 1 183 -6 214 135 0 0 chr10 21126054 21126091 -124463197 - L2 LINE L2 -1 3312 3276 625 291 43 19 chr10 21126772 21127030 -124462258 + L2 LINE L2 2664 2927 -387 222 37 0 0 chr10 21127114 21127141 -124462147 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 261 119 0 0 chr10 21127568 21127610 -124461678 + (A)n Simple_repeat Simple_repeat 1 42 0 2253 79 0 22 chr10 21128583 21128898 -124460390 - AluY SINE Alu -3 308 1 2198 114 3 13 chr10 21129814 21130130 -124459158 - AluSq SINE Alu 0 313 1 45 69 0 0 chr10 21130666 21130753 -124458535 + AT_rich Low_complexity Low_complexity 1 87 0 2126 128 0 0 chr10 21130782 21131078 -124458210 - AluSg SINE Alu -14 296 1 2322 92 3 0 chr10 21131995 21132290 -124456998 + AluSp SINE Alu 1 296 -17 237 313 43 39 chr10 21133975 21134107 -124455181 + MIR SINE MIR 7 153 -63 2042 120 3 3 chr10 21134443 21134750 -124454538 - AluSx SINE Alu 0 307 1 24 0 0 0 chr10 21134805 21134829 -124454459 + AT_rich Low_complexity Low_complexity 1 24 0 207 0 0 0 chr10 21135284 21135307 -124453981 + (T)n Simple_repeat Simple_repeat 1 23 0 1539 171 6 84 chr10 21135343 21135676 -124453612 - AluJo SINE Alu -3 309 3 2182 97 3 3 chr10 21135774 21136072 -124453216 - AluSx SINE Alu -14 298 1 2850 191 27 16 chr10 21136184 21136740 -124452548 - MER68 LTR ERV1 0 562 1 214 377 84 31 chr10 21136742 21136933 -124452355 - L2 LINE L2 -111 3161 2961 861 134 22 8 chr10 21137188 21137322 -124451966 + AluJo SINE Alu 1 136 -176 1814 168 0 19 chr10 21137328 21137637 -124451651 + AluJo SINE Alu 1 303 -9 2234 106 48 31 chr10 21137689 21138047 -124451241 - THE1B LTR MaLR 0 364 1 218 323 55 31 chr10 21140903 21141030 -124448258 - MIR SINE MIR -98 164 35 183 42 0 0 chr10 21141300 21141324 -124447964 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 185 276 92 11 chr10 21141360 21141447 -124447841 + MIR3 SINE MIR 104 197 -11 2056 135 3 0 chr10 21143290 21143586 -124445702 - AluSq SINE Alu -14 299 3 372 281 18 26 chr10 21143890 21144004 -124445284 + MER81 DNA DNA 1 113 -1 1354 249 27 31 chr10 21144240 21144458 -124444830 - MER89 LTR ERV1 0 559 342 2118 114 4 0 chr10 21144458 21144760 -124444528 - AluSx SINE Alu 0 304 2 1354 249 27 31 chr10 21144760 21145002 -124444286 - MER89 LTR ERV1 -217 342 1 2460 144 41 5 chr10 21146486 21146897 -124442391 - MSTB LTR MaLR 0 426 1 1737 154 38 0 chr10 21146937 21147229 -124442059 + AluSx SINE Alu 1 303 -9 384 300 138 6 chr10 21148663 21148823 -124440465 - MER5A DNA MER1_type 0 189 9 2109 123 7 3 chr10 21149302 21149603 -124439685 + AluSx SINE Alu 1 302 -10 2169 147 40 8 chr10 21149696 21150049 -124439239 + THE1B LTR MaLR 1 364 0 1814 144 6 31 chr10 21153335 21153655 -124435633 - AluSx SINE Alu 0 312 1 270 116 0 0 chr10 21154198 21154241 -124435047 + (CCTA)n Simple_repeat Simple_repeat 4 46 0 24 32 0 0 chr10 21154328 21154359 -124434929 + AT_rich Low_complexity Low_complexity 1 31 0 1050 90 17 11 chr10 21155196 21155298 -124433990 + (TTCC)n Simple_repeat Simple_repeat 1 281 0 1050 90 17 11 chr10 21155298 21155476 -124433812 + (TTCC)n Simple_repeat Simple_repeat 1 179 0 258 206 0 0 chr10 21156367 21156435 -124432853 + (TG)n Simple_repeat Simple_repeat 1 68 0 198 150 0 0 chr10 21158104 21158144 -124431144 + (GA)n Simple_repeat Simple_repeat 1 40 0 277 269 59 24 chr10 21158928 21159078 -124430210 - Charlie8 DNA MER1_type -2132 285 136 731 154 0 31 chr10 21160026 21160156 -124429132 + FLAM_C SINE Alu 1 126 -7 1563 203 38 38 chr10 21160481 21160851 -124428437 + MLT1B LTR MaLR 1 370 -20 1272 172 60 34 chr10 21161044 21161312 -124427976 - AluJo SINE Alu -1 311 37 222 174 0 0 chr10 21161585 21161631 -124427657 + (TA)n Simple_repeat Simple_repeat 2 47 0 204 111 67 0 chr10 21162211 21162256 -124427032 + T-rich Low_complexity Low_complexity 2 49 0 1139 99 82 11 chr10 21162285 21162467 -124426821 - L1PA8 LINE L1 -2 6170 5976 2309 72 3 7 chr10 21162697 21163025 -124426263 - AluSg SINE Alu 0 310 1 306 275 166 46 chr10 21163242 21163526 -124425762 - L2 LINE L2 0 3313 2996 238 136 62 0 chr10 21164106 21164187 -124425101 + (TA)n Simple_repeat Simple_repeat 2 87 0 1834 156 117 14 chr10 21164391 21164750 -124424538 + MSTD LTR MaLR 1 396 0 198 71 0 0 chr10 21165589 21165617 -124423671 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 4832 136 40 36 chr10 21165627 21166297 -124422991 - L1PA16 LINE L1 -9 6157 5480 2143 113 14 0 chr10 21166297 21166590 -124422698 - AluSp SINE Alu -16 297 1 4832 136 40 36 chr10 21166590 21166819 -124422469 - L1PA16 LINE L1 -686 5480 5254 38 22 0 0 chr10 21166897 21166942 -124422346 + AT_rich Low_complexity Low_complexity 1 45 0 220 292 0 15 chr10 21167210 21167275 -124422013 + L2 LINE L2 3180 3243 -70 385 271 221 0 chr10 21167569 21167691 -124421597 + MER5B DNA MER1_type 28 176 -2 433 161 74 19 chr10 21167825 21167987 -124421301 + (TATAA)n Simple_repeat Simple_repeat 4 174 0 443 181 78 0 chr10 21168000 21168166 -124421122 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 1407 196 110 46 chr10 21168226 21168598 -124420690 + MSTD LTR MaLR 1 396 0 604 220 187 0 chr10 21169192 21169342 -124419946 - MER5B DNA MER1_type 0 178 1 30 0 0 0 chr10 21170606 21170636 -124418652 + AT_rich Low_complexity Low_complexity 1 30 0 520 268 49 41 chr10 21171283 21171479 -124417809 + MLT1H LTR MaLR 11 251 -298 1885 145 7 10 chr10 21171479 21171782 -124417506 - MER101 LTR ERV1 0 474 173 1550 176 112 0 chr10 21172284 21172596 -124416692 + MER7A DNA MER2_type 2 346 0 2082 134 3 0 chr10 21173007 21173306 -124415982 + AluSx SINE Alu 1 300 -12 1497 193 40 50 chr10 21173723 21174101 -124415187 + MLT1A2 LTR MaLR 1 374 0 1096 86 0 0 chr10 21174953 21175105 -124414183 - L1PA5 LINE L1 -1 6153 6002 2015 97 31 17 chr10 21175572 21175861 -124413427 + AluSg SINE Alu 18 310 0 232 241 165 13 chr10 21177324 21177403 -124411885 - HAL1b LINE L1 -15 1333 1243 2199 233 53 56 chr10 21177539 21178199 -124411089 + MER72 LTR ERV1 1 658 -64 399 56 19 0 chr10 21178324 21178378 -124410910 + MER72 LTR ERV1 668 722 0 330 306 20 20 chr10 21178554 21178701 -124410587 - HAL1b LINE L1 -538 810 664 1120 237 30 79 chr10 21179250 21179643 -124409645 - MLT1A2 LTR MaLR 0 374 1 207 0 0 0 chr10 21180182 21180205 -124409083 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 42 36 0 0 chr10 21181380 21181436 -124407852 + AT_rich Low_complexity Low_complexity 1 56 0 324 70 0 0 chr10 21181687 21181730 -124407558 + (TTCC)n Simple_repeat Simple_repeat 4 46 0 1210 77 0 16 chr10 21181740 21181922 -124407366 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 1904 131 4 0 chr10 21181927 21182202 -124407086 - AluSx SINE Alu -36 276 1 386 315 76 20 chr10 21182219 21182416 -124406872 - MLT1K LTR MaLR -190 398 191 1842 135 4 0 chr10 21182797 21183057 -124406231 - AluSx SINE Alu -45 267 7 22 35 0 0 chr10 21185086 21185115 -124404173 + AT_rich Low_complexity Low_complexity 1 29 0 227 336 39 55 chr10 21185123 21185251 -124404037 + MIR SINE MIR 40 165 -97 492 298 36 18 chr10 21185293 21185461 -124403827 - MIR SINE MIR -48 214 44 765 226 62 16 chr10 21186282 21186525 -124402763 - L1MCc LINE L1 -6133 290 37 8046 162 12 34 chr10 21186727 21188988 -124400300 + L1PA14 LINE L1 3913 6154 -7 432 0 0 0 chr10 21188988 21189036 -124400252 + (TA)n Simple_repeat Simple_repeat 2 49 0 631 240 56 34 chr10 21189056 21189289 -124399999 - Charlie7 DNA MER1_type -1939 673 436 521 232 10 0 chr10 21189297 21189396 -124399892 - MER5A DNA MER1_type -80 109 10 928 187 42 0 chr10 21189404 21189570 -124399718 - MER58B DNA MER1_type 0 341 169 291 114 0 0 chr10 21190315 21190359 -124398929 + (A)n Simple_repeat Simple_repeat 1 44 0 192 239 88 80 chr10 21191394 21191507 -124397781 + MIR SINE MIR 108 221 -41 740 235 157 16 chr10 21191590 21191909 -124397379 - MER31A LTR ERV1 -18 467 104 457 231 12 0 chr10 21191989 21192126 -124397162 + (TGGA)n Simple_repeat Simple_repeat 4 145 -20 2853 24 0 0 chr10 21192126 21192457 -124396831 + L1PA4 LINE L1 5823 6153 -2 457 231 12 0 chr10 21192457 21192479 -124396809 + (TGGA)n Simple_repeat Simple_repeat 145 165 0 228 304 188 9 chr10 21193581 21193693 -124395595 + MIR SINE MIR 6 137 -125 21 0 0 0 chr10 21195584 21195605 -124393683 + AT_rich Low_complexity Low_complexity 1 21 0 946 112 20 0 chr10 21195732 21195884 -124393404 - L1MA4A LINE L1 -4 6299 6145 767 302 34 11 chr10 21195890 21196125 -124393163 + MIR SINE MIR 1 230 -32 326 230 296 0 chr10 21196588 21196723 -124392565 + MER5A DNA MER1_type 9 183 -6 1786 141 41 3 chr10 21197623 21197914 -124391374 - AluJo SINE Alu -10 302 1 198 0 0 0 chr10 21198081 21198103 -124391185 + (A)n Simple_repeat Simple_repeat 1 22 0 192 374 12 24 chr10 21198482 21198565 -124390723 + MIR SINE MIR 11 92 -170 2494 245 23 15 chr10 21198591 21199256 -124390032 - L1MC4a LINE L1 -1 7807 7138 322 269 162 107 chr10 21199613 21199736 -124389552 - MIR SINE MIR -12 250 108 2156 104 0 10 chr10 21199736 21200052 -124389236 + AluSc SINE Alu 1 309 0 322 269 162 107 chr10 21200052 21200144 -124389144 - MIR SINE MIR -154 108 23 24 67 0 0 chr10 21200461 21200506 -124388782 + AT_rich Low_complexity Low_complexity 1 45 0 2244 83 0 0 chr10 21201808 21202086 -124387202 - AluY SINE Alu -7 304 27 184 324 20 74 chr10 21202247 21202395 -124386893 + L2 LINE L2 2375 2514 -800 631 303 29 61 chr10 21202413 21202461 -124386827 + LTR16C LTR ERVL 224 272 -219 190 56 56 0 chr10 21202461 21202497 -124386791 + T-rich Low_complexity Low_complexity 3 40 0 631 303 29 61 chr10 21202497 21202725 -124386563 + LTR16C LTR ERVL 272 491 0 246 350 89 32 chr10 21202763 21203009 -124386279 - L2 LINE L2 -337 2977 2718 3402 134 31 8 chr10 21203024 21203538 -124385750 - MER1A DNA MER1_type 0 529 4 377 21 0 0 chr10 21204582 21204629 -124384659 + MADE1 DNA Mariner 1 47 -33 28 0 0 0 chr10 21204725 21204753 -124384535 + AT_rich Low_complexity Low_complexity 1 28 0 2217 96 3 7 chr10 21204996 21205297 -124383991 + AluSq SINE Alu 1 300 -13 301 136 30 0 chr10 21206196 21206262 -124383026 + (TA)n Simple_repeat Simple_repeat 1 68 0 22 0 0 0 chr10 21206377 21206399 -124382889 + AT_rich Low_complexity Low_complexity 1 22 0 1575 165 38 10 chr10 21206976 21207267 -124382021 + AluJo SINE Alu 4 302 -10 1092 172 6 0 chr10 21207273 21207453 -124381835 + FRAM SINE Alu 1 176 0 2548 93 34 8 chr10 21208936 21209291 -124379997 + THE1B LTR MaLR 1 364 0 1757 130 6 71 chr10 21209658 21209981 -124379307 + AluSp SINE Alu 2 303 -10 1115 39 22 28 chr10 21209984 21210165 -124379123 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1913 163 0 7 chr10 21212782 21213082 -124376206 - AluJo SINE Alu -14 298 1 569 298 87 14 chr10 21213903 21214121 -124375167 + MIR SINE MIR 16 249 -13 246 139 0 0 chr10 21215402 21215445 -124373843 - L1MB3 LINE L1 -3 6180 6138 235 143 18 18 chr10 21215495 21215551 -124373737 + CT-rich Low_complexity Low_complexity 2 57 0 1187 198 0 22 chr10 21215767 21215994 -124373294 + AluJo SINE Alu 79 300 -12 28 71 0 0 chr10 21216616 21216672 -124372616 + AT_rich Low_complexity Low_complexity 1 56 0 5970 66 88 0 chr10 21216726 21217557 -124371731 + L1PA8 LINE L1 5269 6172 0 316 234 81 32 chr10 21217561 21217685 -124371603 + L1ME LINE L1 5204 5333 -813 481 276 35 7 chr10 21217698 21217843 -124371445 + L1MCa LINE L1 140 288 -6276 1846 171 42 35 chr10 21217844 21218372 -124370916 - MLT2A2 LTR ERVL 0 554 18 1208 263 75 25 chr10 21218376 21218814 -124370474 + L1MCa LINE L1 106 565 -5480 563 205 141 46 chr10 21218975 21219238 -124370050 + L1MCa LINE L1 1289 1576 -4988 1234 164 19 157 chr10 21219287 21219352 -124369936 + L1MC3 LINE L1 7413 7485 -300 2113 110 3 28 chr10 21219352 21219669 -124369619 + AluSc SINE Alu 1 309 0 1234 164 19 157 chr10 21219669 21220036 -124369252 + L1MC3 LINE L1 7485 7785 0 371 295 24 43 chr10 21220028 21220235 -124369053 + L1ME LINE L1 5346 5548 -2260 * 312 164 25 118 chr10 21220345 21220473 -124368815 + L1ME LINE L1 5720 5844 -277 236 51 0 51 chr10 21220527 21220566 -124368722 + (TATG)n Simple_repeat Simple_repeat 4 40 0 2515 47 0 7 chr10 21220787 21221088 -124368200 + AluY SINE Alu 1 299 -12 1641 175 14 7 chr10 21223771 21223917 -124365371 - AluJo SINE Alu -30 282 132 254 29 29 0 chr10 21223917 21223952 -124365336 + (TTTTA)n Simple_repeat Simple_repeat 2 37 0 1641 175 14 7 chr10 21223952 21224085 -124365203 - AluJo SINE Alu -180 132 1 506 316 138 0 chr10 21226230 21226448 -124362840 + MIR SINE MIR 15 262 0 414 0 0 0 chr10 21226763 21226809 -124362479 + (TG)n Simple_repeat Simple_repeat 2 47 0 230 332 102 34 chr10 21226878 21227113 -124362175 - L2 LINE L2 -217 3055 2805 230 222 0 0 chr10 21230008 21230053 -124359235 + L2 LINE L2 3262 3306 -7 1519 255 75 27 chr10 21230199 21230681 -124358607 + MLT1D LTR MaLR 1 505 0 1538 205 7 3 chr10 21231283 21231566 -124357722 - AluSx SINE Alu -28 284 1 214 174 43 0 chr10 21231931 21231977 -124357311 - MIR SINE MIR -139 123 76 192 152 0 0 chr10 21232289 21232322 -124356966 + CT-rich Low_complexity Low_complexity 5 37 0 181 107 0 0 chr10 21232486 21232514 -124356774 - L2 LINE L2 -1 3271 3244 875 175 88 58 chr10 21232591 21232899 -124356389 - MER33 DNA MER1_type -7 317 1 279 358 30 0 chr10 21233301 21233435 -124355853 - L2 LINE L2 -563 2751 2614 526 188 78 13 chr10 21233479 21233633 -124355655 + MER103 DNA DNA 3 166 0 212 338 15 15 chr10 21233939 21234075 -124355213 + GA-rich Low_complexity Low_complexity 5 140 0 22 0 0 0 chr10 21235420 21235442 -124353846 + AT_rich Low_complexity Low_complexity 1 22 0 191 150 50 20 chr10 21235477 21235577 -124353711 + (TTATA)n Simple_repeat Simple_repeat 3 105 0 1497 212 85 21 chr10 21235684 21235936 -124353352 - MLT1D LTR MaLR -17 488 195 366 80 0 0 chr10 21235936 21235986 -124353302 + (TG)n Simple_repeat Simple_repeat 2 51 0 1497 212 85 21 chr10 21235986 21236167 -124353121 - MLT1D LTR MaLR -310 195 27 28 29 0 0 chr10 21236667 21236702 -124352586 + AT_rich Low_complexity Low_complexity 1 35 0 364 241 54 0 chr10 21236777 21236889 -124352399 - L1ME4a LINE L1 -32 6089 5972 22 0 0 0 chr10 21238475 21238497 -124350791 + AT_rich Low_complexity Low_complexity 1 22 0 2033 119 3 20 chr10 21239389 21239692 -124349596 - AluSx SINE Alu -12 300 3 1611 295 71 12 chr10 21240118 21240707 -124348581 - L2 LINE L2 -767 2547 1924 611 201 103 58 chr10 21240707 21240931 -124348357 - ORSL DNA AcHobo 0 275 42 383 263 55 89 chr10 21240947 21241183 -124348105 - L2 LINE L2 -1384 1930 1703 198 0 0 0 chr10 21241185 21241207 -124348081 + (GA)n Simple_repeat Simple_repeat 1 22 0 2348 90 6 3 chr10 21241225 21241536 -124347752 - AluSx SINE Alu 0 312 1 513 338 26 22 chr10 21241578 21241809 -124347479 - L2 LINE L2 -1823 1491 1260 21 0 0 0 chr10 21241870 21241891 -124347397 + AT_rich Low_complexity Low_complexity 1 21 0 2236 104 3 0 chr10 21242364 21242662 -124346626 + AluSc SINE Alu 1 299 -10 192 317 109 0 chr10 21243392 21243493 -124345795 + MIR SINE MIR 36 147 -115 254 351 8 30 chr10 21244196 21244330 -124344958 + L2 LINE L2 2889 3019 -253 351 59 0 88 chr10 21244602 21244704 -124344584 + (TA)n Simple_repeat Simple_repeat 1 93 0 207 371 62 10 chr10 21244841 21244938 -124344350 + L2 LINE L2 3121 3222 -50 24 0 0 0 chr10 21245512 21245536 -124343752 + AT_rich Low_complexity Low_complexity 1 24 0 278 250 131 0 chr10 21245877 21245961 -124343327 - MER103 DNA DNA -10 156 62 229 341 87 16 chr10 21248658 21248784 -124340504 - L2 LINE L2 -10 3262 3128 1329 205 15 111 chr10 21249449 21249854 -124339434 + MLT1A2 LTR MaLR 9 374 0 264 303 87 46 chr10 21251002 21251220 -124338068 + L2 LINE L2 2479 2705 -609 1971 157 7 0 chr10 21251434 21251740 -124337548 + AluSx SINE Alu 1 308 -4 191 378 20 26 chr10 21251742 21251893 -124337395 + L2 LINE L2 2707 2856 -458 234 343 0 0 chr10 21251910 21251983 -124337305 + L2 LINE L2 3228 3300 -13 234 312 112 114 chr10 21252007 21252437 -124336851 - L2 LINE L2 -40 3232 2804 29 60 0 0 chr10 21253302 21253352 -124335936 + AT_rich Low_complexity Low_complexity 1 50 0 428 271 112 38 chr10 21254551 21254971 -124334317 + L1M4 LINE L1 4154 4604 -1542 203 256 0 0 chr10 21254986 21255029 -124334259 + (TG)n Simple_repeat Simple_repeat 2 44 0 268 261 0 0 chr10 21255627 21255692 -124333596 + (TA)n Simple_repeat Simple_repeat 2 66 0 327 25 0 0 chr10 21255696 21255736 -124333552 + (CA)n Simple_repeat Simple_repeat 2 41 0 364 333 92 31 chr10 21256309 21256504 -124332784 - MIR SINE MIR -10 252 46 2476 82 125 5 chr10 21256788 21257188 -124332100 - LTR7 LTR ERV1 -2 448 1 2323 98 50 13 chr10 21257188 21257566 -124331722 - HERVH LTR ERV1 0 7713 7322 1386 109 23 14 chr10 21257564 21257785 -124331503 - HERVH LTR ERV1 -1894 5819 5597 * 4404 138 1 1 chr10 21257782 21258443 -124330845 - HERVH LTR ERV1 -2564 5149 4489 3298 114 12 6 chr10 21258446 21258945 -124330343 - HERVH LTR ERV1 -3720 3993 3492 902 142 20 0 chr10 21258935 21259083 -124330205 - HERVH LTR ERV1 -4423 3290 3140 * 20103 93 11 28 chr10 21259077 21262115 -124327173 - HERVH LTR ERV1 -4726 2987 1 2424 92 125 5 chr10 21262117 21262517 -124326771 - LTR7 LTR ERV1 -2 448 1 246 336 52 0 chr10 21263334 21263450 -124325838 - MIR SINE MIR -68 194 73 35 24 0 0 chr10 21263516 21263558 -124325730 + AT_rich Low_complexity Low_complexity 1 42 0 183 217 12 24 chr10 21263563 21263646 -124325642 + (CATA)n Simple_repeat Simple_repeat 2 83 0 504 146 68 3 chr10 21263692 21263990 -124325298 + (TA)n Simple_repeat Simple_repeat 1 317 0 663 161 61 8 chr10 21264048 21264446 -124324842 + (TA)n Simple_repeat Simple_repeat 1 419 0 695 197 0 0 chr10 21265186 21265308 -124323980 + FLAM_A SINE Alu 4 125 -8 11850 218 50 38 chr10 21265827 21268879 -124320409 - L1MA9 LINE L1 0 7333 4573 2320 111 0 0 chr10 21268879 21269177 -124320111 - AluSq SINE Alu -15 298 1 11850 218 50 38 chr10 21269177 21272362 -124316926 - L1MA9 LINE L1 -2760 4573 1428 1325 206 43 20 chr10 21272362 21272664 -124316624 - L1MA9 LINE L1 -6726 365 2 460 237 72 29 chr10 21274732 21274871 -124314417 - MIR SINE MIR -46 216 72 3079 172 20 25 chr10 21275154 21275758 -124313530 + MER6A DNA MER2_type 2 602 -3 198 326 54 62 chr10 21275978 21276107 -124313181 + MIR SINE MIR 75 202 -60 2167 136 0 0 chr10 21276109 21276410 -124312878 + AluSx SINE Alu 1 301 -11 4081 55 0 0 chr10 21276984 21277495 -124311793 + L1PA7 LINE L1 5644 6154 0 2350 68 3 0 chr10 21277497 21277791 -124311497 + AluY SINE Alu 1 328 -63 207 161 0 0 chr10 21277791 21277822 -124311466 + (CAAA)n Simple_repeat Simple_repeat 4 34 0 2350 68 3 0 chr10 21277822 21277887 -124311401 + AluY SINE Alu 328 391 0 450 0 0 0 chr10 21277888 21277938 -124311350 + (TCTA)n Simple_repeat Simple_repeat 1 50 0 183 184 0 0 chr10 21278387 21278425 -124310863 + (TAG)n Simple_repeat Simple_repeat 3 40 0 21 57 0 0 chr10 21278504 21278539 -124310749 + AT_rich Low_complexity Low_complexity 1 35 0 235 304 65 70 chr10 21280804 21281034 -124308254 + MIR SINE MIR 7 235 -27 906 129 0 80 chr10 21281114 21281315 -124307973 - AluSq SINE Alu -32 281 97 21 0 0 0 chr10 21281782 21281803 -124307485 + AT_rich Low_complexity Low_complexity 1 21 0 198 306 20 0 chr10 21282404 21282453 -124306835 - L3 LINE CR1 -106 1471 1422 552 292 0 0 chr10 21282565 21282695 -124306593 + MER94 DNA DNA 1 130 -4 182 289 105 13 chr10 21283264 21283340 -124305948 - L2 LINE L2 -49 3264 3182 444 324 14 0 chr10 21283534 21283676 -124305612 + MIR SINE MIR 109 252 -10 7741 57 10 2 chr10 21284530 21285562 -124303726 - L1P LINE L1 -3531 2615 1576 354 191 8 76 chr10 21286030 21286161 -124303127 - L1 LINE L1 -1174 4972 4851 3607 100 0 24 chr10 21286168 21286717 -124302571 + L1PB1 LINE L1 5615 6150 -1 644 66 33 0 chr10 21286990 21287081 -124302207 + THE1A LTR MaLR 3 96 -259 226 301 41 57 chr10 21287279 21287402 -124301886 - L1MC/D LINE L1 -2154 5654 5534 336 359 36 48 chr10 21287435 21287683 -124301605 - MIR SINE MIR 0 262 18 228 331 169 0 chr10 21288402 21288556 -124300732 + MIR SINE MIR 11 190 -72 34 42 0 0 chr10 21288613 21288661 -124300627 + AT_rich Low_complexity Low_complexity 1 48 0 184 337 116 0 chr10 21288798 21288884 -124300404 + MIR SINE MIR 40 135 -73 379 113 0 70 chr10 21291114 21291185 -124298103 + HERVH LTR ERV1 7648 7713 0 1651 98 107 87 chr10 21291185 21291624 -124297664 + LTR7 LTR ERV1 1 448 -2 371 333 92 31 chr10 21291908 21292103 -124297185 + MIR SINE MIR 46 252 -10 381 22 0 0 chr10 21292676 21292722 -124296566 + (TG)n Simple_repeat Simple_repeat 2 47 0 268 261 0 0 chr10 21292726 21292791 -124296497 + (TA)n Simple_repeat Simple_repeat 1 65 0 1840 148 0 63 chr10 21293702 21294020 -124295268 - AluJb SINE Alu -14 298 1 835 237 48 19 chr10 21295064 21295271 -124294017 + MER58A DNA MER1_type 10 222 -2 4862 134 20 27 chr10 21295883 21296849 -124292439 + L1MA5A LINE L1 5117 6080 -217 206 179 75 15 chr10 21296854 21296921 -124292367 + (TATAA)n Simple_repeat Simple_repeat 5 75 0 1168 106 26 5 chr10 21296950 21297139 -124292149 + L1MA5A LINE L1 6099 6291 -6 2290 82 0 13 chr10 21299005 21299310 -124289978 - AluY SINE Alu -8 303 3 182 324 73 0 chr10 21299480 21299548 -124289740 - MIR SINE MIR -60 148 76 336 149 45 0 chr10 21299755 21299822 -124289466 + T-rich Low_complexity Low_complexity 1 70 0 778 144 35 6 chr10 21299822 21299996 -124289292 + CT-rich Low_complexity Low_complexity 1 179 0 239 178 44 0 chr10 21301766 21301811 -124287477 - MIR SINE MIR -59 149 103 336 154 69 25 chr10 21301811 21301903 -124287385 + L1MA7 LINE L1 6020 6115 -197 900 185 28 5 chr10 21301928 21302139 -124287149 + L1MA7 LINE L1 6064 6279 -12 263 356 11 0 chr10 21302169 21302259 -124287029 - MIR SINE MIR -157 105 15 307 284 142 26 chr10 21302610 21302765 -124286523 - MER5A DNA MER1_type -16 173 1 336 24 0 0 chr10 21302826 21302867 -124286421 + (CA)n Simple_repeat Simple_repeat 2 42 0 1964 149 39 33 chr10 21304145 21304507 -124284781 - THE1B LTR MaLR 0 364 1 3951 178 61 92 chr10 21304710 21306016 -124283272 - MER11A LTR ERVK 0 1266 1 1542 137 26 26 chr10 21306095 21306366 -124282922 - MER44D DNA MER2_type -32 577 37 2982 124 4 61 chr10 21308342 21308496 -124280792 - L1PA13 LINE L1 -1 6162 6001 2438 89 0 0 chr10 21308496 21308809 -124280479 - AluSp SINE Alu 0 313 1 2982 124 4 61 chr10 21308809 21309196 -124280092 - L1PA13 LINE L1 -162 6001 5652 1382 187 41 29 chr10 21309200 21309515 -124279773 - L1MC1 LINE L1 -6 6327 6009 307 96 0 0 chr10 21309518 21309570 -124279718 - L1PB1 LINE L1 -1 6150 6099 361 136 17 0 chr10 21309570 21309629 -124279659 - L1PA13 LINE L1 -498 5663 5604 * 738 147 0 0 chr10 21309625 21309741 -124279547 + L1PA13 LINE L1 5497 5612 -549 181 298 35 35 chr10 21310627 21310684 -124278604 + L2 LINE L2 3203 3259 -13 336 332 26 4 chr10 21310710 21310845 -124278443 - MIR SINE MIR -62 146 17 335 279 60 69 chr10 21311856 21312164 -124277124 - L1M4 LINE L1 -5188 1446 996 475 259 80 12 chr10 21312874 21313036 -124276252 - MIR SINE MIR -1 261 89 186 150 0 0 chr10 21313190 21313230 -124276058 + (CATAT)n Simple_repeat Simple_repeat 3 42 0 2251 98 3 0 chr10 21313553 21313849 -124275439 + AluSx SINE Alu 1 297 -15 27 29 0 0 chr10 21315222 21315256 -124274032 + AT_rich Low_complexity Low_complexity 1 34 0 1132 145 0 0 chr10 21315257 21315416 -124273872 - AluSg/x SINE Alu -25 287 129 867 156 0 0 chr10 21316286 21316427 -124272861 - FRAM SINE Alu -15 161 21 917 174 72 62 chr10 21317831 21318063 -124271225 + AluJb SINE Alu 86 319 0 256 295 95 9 chr10 21318534 21318639 -124270649 + MER91C DNA MER1_type 1 114 -26 997 329 99 24 chr10 21318657 21319509 -124269779 + L2 LINE L2 2419 3313 0 190 370 0 0 chr10 21319954 21320008 -124269280 - L3 LINE CR1 -124 1453 1400 1093 118 0 13 chr10 21320209 21320361 -124268927 + FRAM SINE Alu 2 151 -25 580 246 106 10 chr10 21320467 21320674 -124268614 - MLT1H LTR MaLR 0 549 323 27 0 0 0 chr10 21320681 21320708 -124268580 + AT_rich Low_complexity Low_complexity 1 27 0 1966 133 34 0 chr10 21321115 21321409 -124267879 + AluSp SINE Alu 1 304 -9 270 0 0 0 chr10 21321409 21321439 -124267849 + (GA)n Simple_repeat Simple_repeat 1 30 0 * 832 73 24 0 chr10 21321437 21321561 -124267727 + (GGAA)n Simple_repeat Simple_repeat 2 128 0 1731 108 88 57 chr10 21322147 21322443 -124266845 + AluSx SINE Alu 1 305 -7 201 74 0 0 chr10 21322765 21322792 -124266496 + (TATTG)n Simple_repeat Simple_repeat 3 29 0 1797 180 0 22 chr10 21324171 21324488 -124264800 - AluJb SINE Alu -2 310 1 2571 38 0 3 chr10 21324644 21324958 -124264330 - L1PA2 LINE L1 -2 6153 5841 219 336 103 20 chr10 21327616 21327762 -124261526 - L3b LINE CR1 -166 1417 1260 28 0 0 0 chr10 21328003 21328031 -124261257 + AT_rich Low_complexity Low_complexity 1 28 0 301 280 130 20 chr10 21329310 21329510 -124259778 - L1ME LINE L1 -475 5646 5425 2077 126 3 0 chr10 21330180 21330474 -124258814 - AluSx SINE Alu -16 296 2 747 258 30 0 chr10 21330612 21330810 -124258478 + MER3 DNA MER1_type 5 208 -1 302 226 0 0 chr10 21330768 21330830 -124258458 - MER3 DNA MER1_type -119 90 29 * 43 0 0 0 chr10 21330830 21330873 -124258415 + AT_rich Low_complexity Low_complexity 1 43 0 23 78 0 0 chr10 21330949 21331000 -124258288 + AT_rich Low_complexity Low_complexity 1 51 0 555 144 0 0 chr10 21331813 21331903 -124257385 + AluJ/FLAM SINE Alu 1 90 -222 1015 161 10 10 chr10 21331903 21332095 -124257193 + L1PB4 LINE L1 5965 6156 0 502 87 0 0 chr10 21332102 21332171 -124257117 - MER39B LTR ERV1 -584 69 1 183 80 0 0 chr10 21332210 21332235 -124257053 + (A)n Simple_repeat Simple_repeat 1 25 0 825 93 60 7 chr10 21332474 21332624 -124256664 - L1MA4A LINE L1 0 6303 6146 1594 45 0 0 chr10 21334591 21334789 -124254499 + L1PA5 LINE L1 5954 6151 -3 193 367 22 0 chr10 21334844 21334934 -124254354 - L3 LINE CR1 -78 1499 1408 796 286 33 4 chr10 21335149 21335390 -124253898 - MIR SINE MIR -5 257 10 841 172 0 28 chr10 21335392 21335537 -124253751 + AluJo SINE Alu 7 147 -165 1567 179 28 10 chr10 21335537 21335827 -124253461 + AluJo SINE Alu 5 299 -13 1070 168 79 5 chr10 21336237 21336377 -124252911 - L1MA9 LINE L1 -4 6308 6145 228 35 0 0 chr10 21336377 21336406 -124252882 + (TG)n Simple_repeat Simple_repeat 2 30 0 1070 168 79 5 chr10 21336406 21336479 -124252809 - L1MA9 LINE L1 -167 6145 6079 42 57 0 0 chr10 21337397 21337467 -124251821 + AT_rich Low_complexity Low_complexity 1 70 0 1229 178 124 29 chr10 21337472 21337747 -124251541 + AluJo SINE Alu 1 301 -1 361 245 39 29 chr10 21338355 21338457 -124250831 - L2 LINE L2 -18 3295 3193 310 324 48 9 chr10 21339260 21339365 -124249923 + L2 LINE L2 3166 3274 -39 413 223 11 21 chr10 21339430 21339524 -124249764 + MER81 DNA DNA 22 114 0 257 369 8 16 chr10 21339794 21339916 -124249372 - MIR SINE MIR -65 143 23 469 254 60 40 chr10 21340902 21341103 -124248185 - L2 LINE L2 -1 3312 3108 421 378 66 33 chr10 21341258 21341879 -124247409 - L2 LINE L2 0 3313 2657 198 71 0 0 chr10 21341879 21341907 -124247381 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 421 378 66 33 chr10 21341907 21342045 -124247243 - L2 LINE L2 -656 2657 2525 270 0 0 0 chr10 21342057 21342087 -124247201 + (TG)n Simple_repeat Simple_repeat 1 30 0 768 265 56 29 chr10 21342097 21342403 -124246885 - L1ME2 LINE L1 -9 6138 5825 2461 205 43 41 chr10 21342561 21343122 -124246166 - MER77 LTR ERV1 -43 562 1 206 61 0 30 chr10 21343153 21343186 -124246102 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 227 276 9 145 chr10 21343867 21344088 -124245200 - MIR SINE MIR -21 241 51 454 301 94 42 chr10 21344890 21345465 -124243823 - L1ME2 LINE L1 -914 5215 4611 309 309 67 24 chr10 21345538 21345748 -124243540 - L1ME2 LINE L1 -3283 2846 2628 441 299 52 48 chr10 21345777 21346218 -124243070 - L1ME2 LINE L1 -4969 1150 708 442 424 118 18 chr10 21346794 21347905 -124241383 - L2 LINE L2 -955 2359 1138 189 94 0 0 chr10 21347926 21347958 -124241330 + (A)n Simple_repeat Simple_repeat 1 32 0 252 0 0 0 chr10 21349424 21349452 -124239836 + (T)n Simple_repeat Simple_repeat 1 28 0 200 145 14 43 chr10 21352289 21352358 -124236930 + CT-rich Low_complexity Low_complexity 2 68 0 363 292 25 17 chr10 21352481 21352601 -124236687 - L2 LINE L2 0 3313 3193 2386 92 0 3 chr10 21352666 21352970 -124236318 - AluSq SINE Alu -10 303 1 305 282 26 8 chr10 21353776 21353893 -124235395 - L1MA9 LINE L1 -38 6274 6156 804 156 0 15 chr10 21354534 21354669 -124234619 + FLAM_A SINE Alu 1 133 0 217 225 12 12 chr10 21354803 21354883 -124234405 + GA-rich Low_complexity Low_complexity 2 81 0 686 300 81 9 chr10 21354893 21355116 -124234172 - MIR SINE MIR -17 245 7 2212 91 3 3 chr10 21355140 21355436 -124233852 - AluSx SINE Alu -12 300 5 2212 120 3 0 chr10 21355801 21356102 -124233186 - AluSx SINE Alu -10 302 1 21 0 0 0 chr10 21356655 21356676 -124232612 + AT_rich Low_complexity Low_complexity 1 21 0 190 211 0 0 chr10 21357489 21357527 -124231761 - MER5B DNA MER1_type -2 176 139 343 330 19 0 chr10 21357570 21357673 -124231615 + MER5B DNA MER1_type 51 155 -23 302 321 0 47 chr10 21357763 21357869 -124231419 - MER5A DNA MER1_type -85 104 4 752 89 0 0 chr10 21358137 21358238 -124231050 - MER30 DNA MER1_type -129 101 1 313 182 26 39 chr10 21358301 21358378 -124230910 + MER116 DNA Mariner 5 80 0 303 368 68 76 chr10 21358965 21359375 -124229913 - L2 LINE L2 -1 3271 2865 629 345 79 32 chr10 21359449 21360106 -124229182 - L2 LINE L2 -478 2836 2149 917 107 0 8 chr10 21360112 21360243 -124229045 + AluJb SINE Alu 6 135 -177 794 101 0 106 chr10 21360636 21360863 -124228425 - L1PA8 LINE L1 -77 6095 5893 1106 290 36 28 chr10 21360864 21361254 -124228034 - L2 LINE L2 -797 2517 2125 47 33 0 0 chr10 21362238 21362299 -124226989 + AT_rich Low_complexity Low_complexity 1 61 0 2559 73 0 0 chr10 21362740 21363083 -124226205 + L1PA8 LINE L1 5830 6172 0 21 36 0 0 chr10 21364083 21364111 -124225177 + AT_rich Low_complexity Low_complexity 1 28 0 3534 131 4 4 chr10 21364313 21364872 -124224416 - L1PA13 LINE L1 0 6163 5605 1095 136 24 15 chr10 21365251 21365457 -124223831 - L1MA5 LINE L1 -2 6298 6091 26 64 0 0 chr10 21366021 21366068 -124223220 + AT_rich Low_complexity Low_complexity 1 47 0 1188 162 24 0 chr10 21366090 21366300 -124222988 - L1MA5 LINE L1 -222 6078 5864 321 303 59 34 chr10 21366334 21366453 -124222835 - MER5A DNA MER1_type -45 144 23 246 226 0 0 chr10 21367370 21367432 -124221856 - L1MC4 LINE L1 -1328 6714 6653 234 222 0 0 chr10 21367432 21367486 -124221802 + (CATATA)n Simple_repeat Simple_repeat 1 54 0 1173 15 0 0 chr10 21368366 21368499 -124220789 + L1PA5 LINE L1 6007 6139 -15 192 40 0 0 chr10 21368499 21368524 -124220764 + (TA)n Simple_repeat Simple_repeat 1 25 0 345 54 0 5 chr10 21369501 21369559 -124219729 - L1PA4 LINE L1 -145 5986 5937 1451 18 0 0 chr10 21369559 21369724 -124219564 + L1PA4 LINE L1 5987 6155 0 407 298 18 89 chr10 21369824 21370049 -124219239 - MIR SINE MIR -1 261 53 349 178 14 27 chr10 21371101 21371174 -124218114 + MER58B DNA MER1_type 262 333 -8 351 0 0 0 chr10 21372095 21372134 -124217154 + (TG)n Simple_repeat Simple_repeat 2 40 0 21 0 0 0 chr10 21372531 21372552 -124216736 + AT_rich Low_complexity Low_complexity 1 21 0 1383 12 0 6 chr10 21372552 21372715 -124216573 - L1PA5 LINE L1 -12 6142 5981 271 276 107 86 chr10 21374336 21374579 -124214709 - MIR SINE MIR -3 259 12 194 0 39 0 chr10 21375256 21375282 -124214006 + (TTTG)n Simple_repeat Simple_repeat 1 27 0 2078 101 0 7 chr10 21375284 21375560 -124213728 - AluSc SINE Alu -35 274 1 969 127 0 0 chr10 21375560 21375702 -124213586 - AluSg/x SINE Alu -9 303 162 353 21 0 0 chr10 21376362 21376410 -124212878 - L1MA3 LINE L1 0 6305 6258 447 271 31 0 chr10 21376804 21376933 -124212355 - L1M4 LINE L1 -2022 4124 3992 270 288 133 26 chr10 21377084 21377386 -124211902 + L1ME2 LINE L1 3884 4217 -1929 180 0 0 0 chr10 21378707 21378727 -124210561 + (A)n Simple_repeat Simple_repeat 1 20 0 600 264 98 71 chr10 21379105 21379578 -124209710 + L1MEc LINE L1 2065 2523 -3692 1739 150 0 72 chr10 21379578 21379912 -124209376 + AluJb SINE Alu 2 311 -1 600 264 98 71 chr10 21379912 21380187 -124209101 + L1MEc LINE L1 2523 2789 -3426 945 155 37 5 chr10 21380187 21380374 -124208914 + L1MA9 LINE L1 6120 6312 0 600 264 98 71 chr10 21380374 21380729 -124208559 + L1MEc LINE L1 2789 3206 -3009 30 27 0 0 chr10 21380729 21380766 -124208522 + AT_rich Low_complexity Low_complexity 1 37 0 600 264 98 71 chr10 21380766 21380880 -124208408 + L1MEc LINE L1 3206 3315 -2900 2368 224 65 34 chr10 21380891 21380923 -124208365 + L1ME2 LINE L1 5127 5157 -1007 1529 165 49 14 chr10 21380923 21381208 -124208080 + AluJo SINE Alu 1 295 -17 2368 224 65 34 chr10 21381208 21381572 -124207716 + L1ME2 LINE L1 5157 5508 -656 252 59 0 0 chr10 21381572 21381606 -124207682 + (CA)n Simple_repeat Simple_repeat 1 34 0 2368 224 65 34 chr10 21381606 21382078 -124207210 + L1ME2 LINE L1 5508 6152 -12 937 160 0 6 chr10 21382433 21382589 -124206699 + AluJo SINE Alu 1 155 -157 740 270 15 27 chr10 21382622 21382881 -124206407 - MIR SINE MIR -5 257 2 1742 164 0 32 chr10 21383005 21383316 -124205972 - AluJo SINE Alu -11 301 1 213 121 0 0 chr10 21383845 21383878 -124205410 + (T)n Simple_repeat Simple_repeat 1 33 0 341 301 53 15 chr10 21384702 21384835 -124204453 - MIR SINE MIR -2 260 123 33 56 0 14 chr10 21385386 21385417 -124203871 + AT_rich Low_complexity Low_complexity 1 31 -40 2095 114 0 10 chr10 21385417 21385706 -124203582 + AluSx SINE Alu 1 286 -26 33 56 0 14 chr10 21385706 21385746 -124203542 + AT_rich Low_complexity Low_complexity 31 71 0 529 174 0 31 chr10 21385953 21386051 -124203237 - AluJb SINE Alu -8 304 210 279 122 0 0 chr10 21387399 21387448 -124201840 + (TA)n Simple_repeat Simple_repeat 2 50 0 253 213 13 53 chr10 21387452 21387527 -124201761 + CT-rich Low_complexity Low_complexity 1 72 0 1967 137 0 30 chr10 21387622 21387921 -124201367 + AluSx SINE Alu 1 290 -22 340 255 0 43 chr10 21387924 21388018 -124201270 - L1MC4 LINE L1 -1339 6703 6614 338 310 10 0 chr10 21387932 21388032 -124201256 + L1MC4 LINE L1 6614 6714 -1328 * 1968 131 58 17 chr10 21388583 21388943 -124200345 - THE1C LTR MaLR 0 375 1 3222 127 21 10 chr10 21389188 21389702 -124199586 - L1PA15 LINE L1 -7 6158 5639 180 0 0 0 chr10 21389969 21389989 -124199299 + (A)n Simple_repeat Simple_repeat 1 20 0 1832 168 30 0 chr10 21390763 21391061 -124198227 + AluJo SINE Alu 3 309 -3 357 62 0 0 chr10 21391180 21391228 -124198060 + (TGGA)n Simple_repeat Simple_repeat 1 48 0 226 306 14 0 chr10 21391231 21391303 -124197985 + GA-rich Low_complexity Low_complexity 4 76 0 646 253 6 12 chr10 21391602 21391768 -124197520 - MIR SINE MIR -1 261 97 2071 103 3 7 chr10 21391978 21392269 -124197019 - AluSx SINE Alu -22 290 1 609 304 25 0 chr10 21392423 21392584 -124196704 + MIR SINE MIR 13 177 -85 2222 110 0 22 chr10 21393034 21393352 -124195936 + AluSx SINE Alu 1 311 -1 2214 107 7 0 chr10 21394091 21394389 -124194899 + AluSq SINE Alu 1 300 -13 1933 153 13 0 chr10 21395606 21395907 -124193381 - AluSx SINE Alu -7 305 1 1487 195 3 58 chr10 21396436 21396744 -124192544 + AluJb SINE Alu 6 296 -16 470 284 0 31 chr10 21397590 21397717 -124191571 - MIR3 SINE MIR -4 204 82 251 303 25 33 chr10 21398185 21398307 -124190981 - L1ME4a LINE L1 -46 6075 5955 2221 180 102 7 chr10 21398567 21399028 -124190260 - MLT1D LTR MaLR 0 505 1 299 294 0 0 chr10 21399057 21399142 -124190146 - MER104 DNA Tc2 -77 103 19 2277 110 0 13 chr10 21399240 21399549 -124189739 + AluSx SINE Alu 1 305 -7 694 300 101 0 chr10 21399670 21399907 -124189381 - MIR SINE MIR 0 262 2 185 339 54 31 chr10 21401319 21401449 -124187839 - L2 LINE L2 -1698 1616 1484 995 213 80 3 chr10 21401453 21401754 -124187534 + MER33 DNA MER1_type 1 324 0 429 241 88 58 chr10 21401899 21402036 -124187252 - L2 LINE L2 0 3313 3173 29 28 0 0 chr10 21402274 21402310 -124186978 + AT_rich Low_complexity Low_complexity 1 36 0 2051 134 0 0 chr10 21402340 21402657 -124186631 + AluSx SINE Alu 1 317 0 435 119 0 0 chr10 21404409 21404476 -124184812 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 2126 141 0 0 chr10 21405361 21405673 -124183615 - AluSx SINE Alu 0 312 1 27 29 0 0 chr10 21405805 21405839 -124183449 + AT_rich Low_complexity Low_complexity 1 34 0 457 349 60 13 chr10 21406306 21406538 -124182750 + L3 LINE CR1 1290 1532 -45 251 53 0 0 chr10 21407077 21407115 -124182173 - L1MA3 LINE L1 0 6305 6268 2134 123 0 3 chr10 21407247 21407555 -124181733 - AluSg SINE Alu 0 310 4 2514 61 0 3 chr10 21407983 21408294 -124180994 + AluY SINE Alu 1 310 -1 21 36 0 0 chr10 21408667 21408695 -124180593 + AT_rich Low_complexity Low_complexity 1 28 0 4515 205 20 18 chr10 21409327 21410652 -124178636 - L1MA9 LINE L1 -36 6276 4948 2175 99 3 0 chr10 21410830 21411114 -124178174 + AluSp SINE Alu 2 286 -27 2966 174 105 79 chr10 21411194 21412290 -124176998 + L1PA12 LINE L1 1 1801 -5780 5708 101 21 8 chr10 21412291 21413725 -124175563 + L1PA14 LINE L1 4672 6152 -9 22 35 0 0 chr10 21413872 21413901 -124175387 + AT_rich Low_complexity Low_complexity 1 29 0 365 330 93 31 chr10 21414038 21414490 -124174798 + HAL1b LINE L1 128 607 -741 319 348 80 0 chr10 21415181 21415319 -124173969 + MLT1J2 LTR MaLR 255 403 -47 22 35 0 0 chr10 21415715 21415744 -124173544 + AT_rich Low_complexity Low_complexity 1 29 0 221 225 247 22 chr10 21416050 21416139 -124173149 + L2 LINE L2 3202 3310 -3 202 342 18 36 chr10 21416543 21416654 -124172634 - MIR3 SINE MIR -40 168 60 194 0 0 37 chr10 21417012 21417039 -124172249 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 562 242 15 0 chr10 21418376 21418508 -124170780 - MER94 DNA DNA 0 134 1 2014 132 0 0 chr10 21418989 21419269 -124170019 + AluSx SINE Alu 1 280 -32 273 29 0 0 chr10 21419271 21419305 -124169983 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 217 333 29 54 chr10 21419685 21419790 -124169498 - L2 LINE L2 -788 2526 2427 1959 114 82 0 chr10 21419790 21420070 -124169218 - AluSq SINE Alu -10 303 1 217 333 29 54 chr10 21420070 21420168 -124169120 - L2 LINE L2 -887 2427 2328 372 59 0 0 chr10 21420375 21420426 -124168862 + (CA)n Simple_repeat Simple_repeat 2 52 0 27 29 0 0 chr10 21421655 21421689 -124167599 + AT_rich Low_complexity Low_complexity 1 34 0 2352 231 9 6 chr10 21421870 21422394 -124166894 + MER97b DNA MER1_type? 40 565 -488 562 233 28 75 chr10 21422464 21422717 -124166571 + MER97c DNA MER1_type? 850 1090 0 218 175 0 18 chr10 21422781 21422838 -124166450 + (TA)n Simple_repeat Simple_repeat 2 57 0 1580 180 24 21 chr10 21422990 21423108 -124166180 + AluJb SINE Alu 1 117 -195 195 42 0 0 chr10 21423108 21423132 -124166156 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 1580 180 24 21 chr10 21423132 21423302 -124165986 + AluJb SINE Alu 117 290 -22 322 171 13 13 chr10 21423305 21423381 -124165907 + GA-rich Low_complexity Low_complexity 1 76 0 343 211 168 12 chr10 21424082 21424243 -124165045 - MER53 DNA DNA -3 186 1 400 244 181 31 chr10 21424518 21424678 -124164610 + MER5A DNA MER1_type 4 187 -2 2155 118 0 0 chr10 21424886 21425174 -124164114 + AluSx SINE Alu 1 288 -24 24 0 0 0 chr10 21425177 21425201 -124164087 + AT_rich Low_complexity Low_complexity 1 24 0 2164 93 4 0 chr10 21426209 21426489 -124162799 + AluSg SINE Alu 24 304 -6 270 276 0 0 chr10 21426757 21426815 -124162473 - MIR SINE MIR -64 144 87 2414 106 26 13 chr10 21427011 21427399 -124161889 - L1MA2 LINE L1 -209 6095 5703 25 0 0 0 chr10 21428603 21428628 -124160660 + AT_rich Low_complexity Low_complexity 1 25 0 186 71 0 0 chr10 21429147 21429175 -124160113 + (CAAA)n Simple_repeat Simple_repeat 4 31 0 29 28 0 0 chr10 21430160 21430196 -124159092 + AT_rich Low_complexity Low_complexity 1 36 0 1036 55 78 0 chr10 21431850 21431978 -124157310 - MER85 DNA T2_type 0 139 2 1025 189 61 0 chr10 21432148 21432344 -124156944 - MER3 DNA MER1_type -1 208 1 245 276 0 48 chr10 21432493 21432615 -124156673 + MIR SINE MIR 78 190 -72 21 0 0 0 chr10 21433143 21433164 -124156124 + AT_rich Low_complexity Low_complexity 1 21 0 255 291 13 0 chr10 21433561 21433640 -124155648 + (CATATA)n Simple_repeat Simple_repeat 2 81 0 297 0 0 0 chr10 21433662 21433695 -124155593 + (TG)n Simple_repeat Simple_repeat 2 34 0 1065 184 0 0 chr10 21433697 21433860 -124155428 + FRAM SINE Alu 1 163 -3 368 247 0 0 chr10 21433865 21433946 -124155342 - MIR3 SINE MIR -41 167 87 252 212 15 45 chr10 21434565 21434631 -124154657 - L2 LINE L2 -15 3298 3235 1723 92 4 0 chr10 21435925 21436152 -124153136 - AluSp SINE Alu -85 228 1 21 36 0 0 chr10 21439490 21439518 -124149770 + AT_rich Low_complexity Low_complexity 1 28 0 1518 185 53 20 chr10 21439643 21439945 -124149343 - AluJb SINE Alu 0 312 1 268 277 20 40 chr10 21440063 21440164 -124149124 - L2 LINE L2 -188 3084 2986 43374 53 1 4 chr10 21440724 21446885 -124142403 - L1PA4 LINE L1 -8 6147 3 390 321 144 32 chr10 21446917 21447637 -124141651 - L2 LINE L2 -896 2418 1618 319 315 98 94 chr10 21447940 21448216 -124141072 + L2 LINE L2 2996 3272 0 891 248 102 98 chr10 21448724 21449224 -124140064 + MLT1L LTR MaLR 19 520 -95 10881 72 5 13 chr10 21449349 21450770 -124138518 - L1P LINE L1 -4736 1410 1 831 124 0 0 chr10 21450778 21450891 -124138397 - AluSp/q SINE Alu -15 298 186 2922 56 56 11 chr10 21452839 21453216 -124136072 - L1PA10 LINE L1 -4 6164 5771 2174 137 0 0 chr10 21453585 21453884 -124135404 + AluSx SINE Alu 1 299 -13 332 308 69 0 chr10 21453891 21454021 -124135267 + MIR SINE MIR 76 214 -48 23 0 0 0 chr10 21454353 21454376 -124134912 + AT_rich Low_complexity Low_complexity 1 23 0 2497 226 122 14 chr10 21454689 21455409 -124133879 - MER21B LTR ERV1 -52 811 14 1503 196 3 27 chr10 21455671 21455972 -124133316 + AluJb SINE Alu 3 296 -16 194 397 0 0 chr10 21456072 21456145 -124133143 - L2 LINE L2 0 3313 3241 642 301 78 0 chr10 21456170 21456389 -124132899 - MIR SINE MIR -26 236 1 627 270 218 31 chr10 21456419 21456912 -124132376 - L2 LINE L2 -78 3235 2624 3395 132 23 0 chr10 21456955 21457439 -124131849 + MER1A DNA MER1_type 33 527 -2 1852 213 40 9 chr10 21457441 21457869 -124131419 - MER74C LTR ERVL -2 458 18 424 202 29 0 chr10 21457911 21458015 -124131273 - L2 LINE L2 -742 2572 2466 387 231 31 136 chr10 21458183 21458477 -124130811 + L1ME4a LINE L1 5630 5892 -229 249 231 51 13 chr10 21458509 21458587 -124130701 - MIR SINE MIR -2 260 180 746 204 20 7 chr10 21458945 21459097 -124130191 - Tigger2 DNA MER2_type -1 2717 2564 * 1205 134 10 14 chr10 21459094 21459303 -124129985 - Tigger2 DNA MER2_type -2510 208 1 2024 121 10 7 chr10 21459865 21460162 -124129126 + AluSg SINE Alu 1 298 -12 715 227 102 32 chr10 21460312 21460528 -124128760 + MIR SINE MIR 32 262 0 1653 232 178 29 chr10 21460545 21460787 -124128501 - MLT1H LTR MaLR 0 549 344 2810 10 0 0 chr10 21460787 21461090 -124128198 - AluY SINE Alu -8 303 1 1653 232 178 29 chr10 21461090 21461325 -124127963 - MLT1H LTR MaLR -205 344 1 304 319 38 52 chr10 21461327 21461537 -124127751 - L2 LINE L2 -1036 2278 2072 222 344 122 43 chr10 21462258 21462537 -124126751 - L2 LINE L2 -2394 920 620 2214 141 133 13 chr10 21462598 21462995 -124126293 + MER65A LTR ERV1 1 445 0 869 183 0 0 chr10 21463061 21463192 -124126096 + FLAM_A SINE Alu 1 131 -2 261 312 37 9 chr10 21463270 21463379 -124125909 + L1ME LINE L1 5454 5565 -556 1987 154 128 21 chr10 21463535 21463918 -124125370 - MSTA LTR MaLR 0 428 5 5719 129 20 14 chr10 21463918 21464797 -124124491 - MSTA-int LTR MaLR -1 1579 695 1384 142 0 5 chr10 21464781 21464993 -124124295 - MSTA-int LTR MaLR -1367 213 3 * 1730 179 130 41 chr10 21464995 21465386 -124123902 - MSTA LTR MaLR 0 428 3 326 328 61 114 chr10 21465802 21466282 -124123006 - L2 LINE L2 -20 3252 2799 403 246 242 16 chr10 21466361 21466617 -124122671 + L2 LINE L2 3000 3313 0 830 285 73 7 chr10 21467017 21467291 -124121997 - LTR16C LTR ERVL -1 490 199 4449 194 51 6 chr10 21467330 21468154 -124121134 - MER21B LTR ERV1 -2 861 1 2610 207 18 2 chr10 21468399 21468854 -124120434 - MER70A LTR ERVL -10 462 1 1802 193 0 0 chr10 21468869 21469180 -124120108 - AluJb SINE Alu 0 312 2 1984 140 0 7 chr10 21469914 21470221 -124119067 + AluSx SINE Alu 1 305 -7 843 256 122 36 chr10 21470441 21470852 -124118436 + L2 LINE L2 2867 3312 -1 2676 206 19 71 chr10 21470910 21471556 -124117732 + LTR9 LTR ERV1 1 612 0 2153 169 0 55 chr10 21473765 21474184 -124115104 - MER57A LTR ERV1 -5 398 3 498 202 0 19 chr10 21474203 21474307 -124114981 - MER57A-int LTR ERV1 -29 7508 7407 684 218 113 56 chr10 21474307 21474591 -124114697 - LTR54 LTR ERV1 -210 300 1 2842 219 43 93 chr10 21474591 21475547 -124113741 - MER57A-int LTR ERV1 -490 7326 6419 322 154 0 0 chr10 21475548 21475600 -124113688 - MER57A-int LTR ERV1 -1346 6470 6419 * 2153 205 68 14 chr10 21475569 21476037 -124113251 - MER57A-int LTR ERV1 -1251 6286 5825 4833 191 63 77 chr10 21476340 21477899 -124111389 - MER57A-int LTR ERV1 -1720 5817 4281 38 68 0 0 chr10 21478106 21478179 -124111109 + AT_rich Low_complexity Low_complexity 1 73 0 21 36 0 0 chr10 21478262 21478290 -124110998 + AT_rich Low_complexity Low_complexity 1 28 0 514 224 0 0 chr10 21478486 21478584 -124110704 - MER57A-int LTR ERV1 -2886 3445 3348 1257 204 23 66 chr10 21478608 21478912 -124110376 - MER57A-int LTR ERV1 -2960 3371 3081 495 173 36 103 chr10 21478905 21479156 -124110132 - MER57A-int LTR ERV1 -3724 1982 1083 * 849 268 70 33 chr10 21479156 21479428 -124109860 - MER34C LTR ERV1 -155 430 149 386 303 35 14 chr10 21479428 21479570 -124109718 - MER57A-int LTR ERV1 -4138 985 841 3401 231 27 38 chr10 21479680 21480518 -124108770 - MER57A-int LTR ERV1 -6708 829 1 2322 179 0 34 chr10 21480518 21480931 -124108357 - MER57A LTR ERV1 0 403 5 425 232 283 15 chr10 21481028 21481226 -124108062 + MIR SINE MIR 7 257 -5 758 202 8 0 chr10 21481416 21481545 -124107743 - FLAM_C SINE Alu -2 131 2 368 296 75 38 chr10 21481739 21481925 -124107363 - MIR SINE MIR 0 262 70 980 238 66 24 chr10 21481926 21482264 -124107024 + MSTD LTR MaLR 1 396 0 4964 238 79 35 chr10 21482266 21483925 -124105363 + MSTD-int LTR MaLR 2 1730 -5 407 204 11 21 chr10 21483934 21484027 -124105261 + MSTD LTR MaLR 5 96 -332 909 166 24 6 chr10 21484044 21484213 -124105075 + MSTD LTR MaLR 225 396 0 1078 260 28 69 chr10 21484405 21484797 -124104491 + MER72 LTR ERV1 1 376 -346 2014 199 54 14 chr10 21484930 21485356 -124103932 + MER72 LTR ERV1 279 721 -1 207 0 0 0 chr10 21486014 21486037 -124103251 + (A)n Simple_repeat Simple_repeat 1 23 0 2829 189 14 0 chr10 21486543 21487056 -124102232 + MLT2B1 LTR ERVL 1 520 0 250 271 138 55 chr10 21487159 21487340 -124101948 - L2 LINE L2 0 3313 3118 473 267 77 72 chr10 21487800 21487995 -124101293 + MIR SINE MIR 53 248 -14 39 0 0 0 chr10 21488015 21488054 -124101234 + AT_rich Low_complexity Low_complexity 1 39 0 36552 47 1 3 chr10 21488059 21492814 -124096474 - L1P LINE L1 -1398 4748 4 1795 161 0 33 chr10 21493440 21493773 -124095515 + AluJb SINE Alu 1 323 0 1545 173 106 3 chr10 21495455 21495738 -124093550 + AluJo SINE Alu 1 312 0 1313 238 36 44 chr10 21496505 21496917 -124092371 + LTR9 LTR ERV1 191 599 -13 2225 92 0 7 chr10 21496964 21497256 -124092032 + AluSp SINE Alu 12 301 -12 636 256 82 101 chr10 21498061 21498648 -124090640 + HAL1 LINE L1 1385 1960 -547 460 279 102 37 chr10 21498656 21499005 -124090283 + L1ME1 LINE L1 3583 3956 -2190 471 229 65 0 chr10 21499006 21499201 -124090087 + L1ME1 LINE L1 5221 5444 -722 877 154 15 0 chr10 21499202 21499338 -124089950 - AluJb SINE Alu -17 295 158 702 186 84 99 chr10 21499352 21499448 -124089840 + L1ME1 LINE L1 5459 5555 -611 2011 120 0 41 chr10 21499448 21499785 -124089503 - AluSc SINE Alu 0 325 1 1192 148 40 0 chr10 21499795 21499997 -124089291 - L1PB4 LINE L1 -1 6155 5946 702 186 84 99 chr10 21499997 21500151 -124089137 + L1ME1 LINE L1 5564 5717 -449 1297 210 17 33 chr10 21500151 21500640 -124088648 + MER74B LTR ERVL 53 616 -6 349 227 81 8 chr10 21500656 21500803 -124088485 + L1ME1 LINE L1 5727 5899 -285 1134 198 93 43 chr10 21500835 21500958 -124088330 + AluJo SINE Alu 11 126 -186 450 0 0 0 chr10 21500958 21501008 -124088280 + (CA)n Simple_repeat Simple_repeat 1 50 0 1134 198 93 43 chr10 21501008 21501142 -124088146 + AluJo SINE Alu 126 281 -31 948 245 42 0 chr10 21501151 21501412 -124087876 + L1ME1 LINE L1 5876 6147 -19 824 193 44 17 chr10 21501412 21501593 -124087695 - MLT1D LTR MaLR 0 505 320 2189 111 0 0 chr10 21501716 21502005 -124087283 + AluSg SINE Alu 1 289 -21 265 236 28 0 chr10 21502020 21502092 -124087196 - MLT1D LTR MaLR -357 148 75 390 253 13 0 chr10 21502097 21502176 -124087112 - MER5A DNA MER1_type -103 86 7 1573 187 0 32 chr10 21502504 21502788 -124086500 - AluJo SINE Alu -26 286 12 259 103 0 0 chr10 21503101 21503140 -124086148 - MADE1 DNA Mariner -37 43 5 512 287 58 20 chr10 21504616 21504964 -124084324 + L1ME4a LINE L1 4358 4718 -1428 424 280 107 42 chr10 21505103 21505263 -124084025 + L1ME4a LINE L1 5409 5557 -564 2147 141 33 28 chr10 21505263 21505625 -124083663 - THE1B LTR MaLR 0 364 1 424 280 107 42 chr10 21505625 21505961 -124083327 + L1ME4a LINE L1 5557 5935 -186 2068 109 9 58 chr10 21506111 21506440 -124082848 + AluSq SINE Alu 1 313 0 205 360 56 24 chr10 21507545 21507670 -124081618 + MIR SINE MIR 20 148 -114 3045 68 2 5 chr10 21507950 21508359 -124080929 + L1PA13 LINE L1 5753 6160 -3 2215 113 0 3 chr10 21509559 21509861 -124079427 - AluSx SINE Alu -11 301 1 2267 136 11 3 chr10 21510479 21510831 -124078457 + THE1A LTR MaLR 1 355 0 2671 102 0 3 chr10 21512658 21513021 -124076267 - THE1B LTR MaLR -2 362 1 755 206 0 0 chr10 21513024 21513155 -124076133 + FRAM SINE Alu 28 158 -18 556 282 83 34 chr10 21513170 21513548 -124075740 + LTR16A LTR ERVL 18 418 -32 237 319 159 14 chr10 21513676 21513814 -124075474 + MIR SINE MIR 105 262 0 2014 196 24 9 chr10 21513976 21514395 -124074893 + MSTB1 LTR MaLR 8 432 0 23 0 0 0 chr10 21515288 21515311 -124073977 + AT_rich Low_complexity Low_complexity 1 23 0 562 307 133 16 chr10 21515710 21516199 -124073089 - L1ME LINE L1 -359 5803 5258 25 51 0 0 chr10 21516220 21516259 -124073029 + AT_rich Low_complexity Low_complexity 1 39 0 13133 188 35 22 chr10 21516470 21519487 -124069801 - L1PB1 LINE L1 0 6867 3890 180 0 0 0 chr10 21519487 21519507 -124069781 + (TTG)n Simple_repeat Simple_repeat 2 21 0 13133 188 35 22 chr10 21519507 21522863 -124066425 - L1PB1 LINE L1 -2977 3890 216 3367 69 5 7 chr10 21522863 21523312 -124065976 - LTR7 LTR ERV1 -2 448 1 13133 188 35 22 chr10 21523312 21523526 -124065762 - L1PB1 LINE L1 -6651 216 6 499 323 101 46 chr10 21523537 21524064 -124065224 - L1ME LINE L1 -1194 4952 4409 516 257 28 86 chr10 21524196 21524523 -124064765 - L1ME LINE L1 -1985 4161 3854 293 188 0 14 chr10 21524946 21525015 -124064273 - MER41B LTR ERV1 -310 325 258 2137 101 0 44 chr10 21525122 21525442 -124063846 - AluSp SINE Alu 0 307 1 494 331 61 27 chr10 21525821 21526196 -124063092 - L1ME LINE L1 -2320 3826 3439 243 284 134 25 chr10 21526237 21526505 -124062783 - L1ME LINE L1 -2751 3395 3069 1795 150 97 29 chr10 21526505 21526845 -124062443 - THE1B LTR MaLR -1 363 1 243 284 134 25 chr10 21526845 21526970 -124062318 - L1ME LINE L1 -3077 3069 2959 2031 238 73 18 chr10 21527059 21527996 -124061292 - L1ME1 LINE L1 -179 5987 5008 306 329 142 15 chr10 21528268 21528542 -124060746 - L1ME3 LINE L1 -211 5951 5643 664 252 28 8 chr10 21528585 21528835 -124060453 - L1ME3 LINE L1 -563 5607 5353 3648 139 11 26 chr10 21528849 21529310 -124059978 - Tigger1 DNA MER2_type -7 2411 1961 2398 73 0 3 chr10 21529310 21529610 -124059678 + AluY SINE Alu 1 299 -12 3648 139 11 26 chr10 21529610 21529790 -124059498 - Tigger1 DNA MER2_type -457 1961 1780 610 254 244 3 chr10 21529852 21530151 -124059137 - HsTC2 DNA Tc2 -1508 390 20 345 298 39 0 chr10 21530163 21530267 -124059021 + MER81 DNA DNA 1 108 -6 2774 13 0 3 chr10 21530334 21530643 -124058645 + AluYa5 SINE Alu 1 308 -3 306 324 76 36 chr10 21530921 21531171 -124058117 - L2 LINE L2 -58 3255 2996 2325 111 0 0 chr10 21531327 21531634 -124057654 - AluSx SINE Alu -5 307 1 460 88 71 80 chr10 21531641 21531754 -124057534 + L1MA9 LINE L1 6129 6240 -72 253 110 68 0 chr10 21531754 21531827 -124057461 + (TA)n Simple_repeat Simple_repeat 1 78 0 226 132 113 0 chr10 21531830 21531883 -124057405 - L1MA9 LINE L1 -9 6303 6245 240 122 102 0 chr10 21531894 21531943 -124057345 + L1MA9 LINE L1 6256 6309 -3 346 284 98 76 chr10 21532076 21532351 -124056937 - L1MEd LINE L1 -5555 564 284 345 293 65 16 chr10 21532505 21532628 -124056660 - L1MEd LINE L1 -5922 197 69 241 302 127 16 chr10 21533220 21533346 -124055942 + MIR SINE MIR 2 141 -121 286 367 51 0 chr10 21533575 21533673 -124055615 + L2 LINE L2 3116 3218 -54 276 30 0 0 chr10 21534061 21534094 -124055194 + (TG)n Simple_repeat Simple_repeat 2 34 0 2680 88 3 0 chr10 21534631 21534985 -124054303 - THE1A LTR MaLR 0 355 1 279 109 250 0 chr10 21535193 21535257 -124054031 + MADE1 DNA Mariner 1 80 0 1540 191 28 58 chr10 21535508 21535870 -124053418 + MLT2B3 LTR ERVL 204 554 0 3801 239 78 70 chr10 21535870 21537591 -124051697 + MLT1A1-int LTR MaLR 1 1735 0 1233 164 38 116 chr10 21537596 21537992 -124051296 + MLT1A1 LTR MaLR 1 365 0 3331 287 67 16 chr10 21538046 21539217 -124050071 - L2 LINE L2 -384 2930 1701 286 333 133 6 chr10 21539935 21540100 -124049188 - MIR SINE MIR -21 241 56 277 388 23 0 chr10 21541167 21541296 -124047992 - L2 LINE L2 -957 2357 2226 381 328 140 8 chr10 21541641 21541906 -124047382 - L1M4 LINE L1 -1550 4596 4297 226 185 65 65 chr10 21542022 21542114 -124047174 + L1M4 LINE L1 4725 4816 -1330 439 314 79 60 chr10 21542184 21542604 -124046684 + L1M4 LINE L1 4878 5305 -841 21 0 0 0 chr10 21542704 21542725 -124046563 + AT_rich Low_complexity Low_complexity 1 21 0 363 317 90 64 chr10 21543760 21544369 -124044919 + L1ME LINE L1 4676 5300 -846 274 381 17 0 chr10 21544517 21544698 -124044590 + L1ME LINE L1 5465 5648 -514 741 319 126 17 chr10 21544952 21545357 -124043931 - MLT1G1 LTR MaLR 0 595 147 283 246 71 56 chr10 21545485 21545611 -124043677 - MLT1G1-int LTR MaLR -30 1341 1214 406 269 0 9 chr10 21546470 21546578 -124042710 - MLT1G1-int LTR MaLR -826 545 439 634 308 147 8 chr10 21546978 21547345 -124041943 - L2 LINE L2 -908 2406 1989 1973 130 43 10 chr10 21547351 21547652 -124041636 + AluSx SINE Alu 1 311 -1 3715 133 14 67 chr10 21549655 21549813 -124039475 + L1MA8 LINE L1 5548 5713 -578 1358 222 21 21 chr10 21549813 21549967 -124039321 - AluJo SINE Alu -24 288 132 207 0 0 0 chr10 21549967 21549990 -124039298 + (TTG)n Simple_repeat Simple_repeat 2 24 0 1358 222 21 21 chr10 21549990 21550123 -124039165 - AluJo SINE Alu -179 133 1 3715 133 14 67 chr10 21550123 21550476 -124038812 + L1MA8 LINE L1 5713 6008 -283 2497 64 0 0 chr10 21550476 21550787 -124038501 + AluY SINE Alu 1 311 0 3715 133 14 67 chr10 21550787 21551039 -124038249 + L1MA8 LINE L1 6008 6272 -19 308 268 57 8 chr10 21551052 21551175 -124038113 + L1ME4a LINE L1 5960 6088 -33 25 31 0 0 chr10 21551207 21551239 -124038049 + AT_rich Low_complexity Low_complexity 1 32 0 2160 129 3 3 chr10 21551451 21551753 -124037535 + AluSx SINE Alu 1 302 -10 638 282 60 30 chr10 21552272 21552506 -124036782 - MIR SINE MIR -20 242 2 2117 127 7 3 chr10 21553687 21553986 -124035302 + AluSx SINE Alu 1 300 -12 23 33 0 0 chr10 21554642 21554672 -124034616 + AT_rich Low_complexity Low_complexity 1 30 0 2223 124 0 0 chr10 21555188 21555495 -124033793 + AluSg SINE Alu 1 307 -3 240 35 0 0 chr10 21556414 21556443 -124032845 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 351 325 52 100 chr10 21556780 21556859 -124032429 + L2 LINE L2 2997 3078 -194 1218 205 46 60 chr10 21556859 21557229 -124032059 + MLT1A1 LTR MaLR 1 365 0 351 325 52 100 chr10 21557229 21557438 -124031850 + L2 LINE L2 3078 3271 -1 216 0 0 0 chr10 21557661 21557685 -124031603 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 566 63 13 0 chr10 21557873 21557952 -124031336 + (TTTCC)n Simple_repeat Simple_repeat 5 84 0 690 13 0 0 chr10 21558088 21558167 -124031121 + (TTTCC)n Simple_repeat Simple_repeat 3 81 0 22 35 0 0 chr10 21559989 21560018 -124029270 + AT_rich Low_complexity Low_complexity 1 29 0 323 231 26 0 chr10 21560105 21560183 -124029105 - L1MB8 LINE L1 -6 6172 6093 2254 153 19 2 chr10 21560215 21560632 -124028656 - L1MB4 LINE L1 -33 6147 5724 775 133 24 12 chr10 21562281 21562447 -124026841 + CT-rich Low_complexity Low_complexity 1 168 0 1003 180 84 63 chr10 21562447 21562686 -124026602 - AluJo SINE Alu -18 294 51 633 154 0 0 chr10 21564979 21565083 -124024205 - MER5A DNA MER1_type -83 106 3 2229 129 3 0 chr10 21565677 21565980 -124023308 - AluSp SINE Alu -9 304 1 28 48 0 0 chr10 21566047 21566089 -124023199 + AT_rich Low_complexity Low_complexity 1 42 0 5689 101 18 9 chr10 21566705 21567734 -124021554 + L1PA10 LINE L1 5135 6172 0 2215 96 13 7 chr10 21568116 21568419 -124020869 + AluSx SINE Alu 1 305 -7 1927 149 7 3 chr10 21569241 21569550 -124019738 - AluSq SINE Alu -3 310 1 1985 173 5 16 chr10 21569613 21569982 -124019306 + MLT1A1 LTR MaLR 1 365 0 320 328 72 8 chr10 21569995 21570120 -124019168 - L2 LINE L2 0 3272 3140 1684 162 23 42 chr10 21570293 21570602 -124018686 + AluJo SINE Alu 1 303 -9 321 26 0 0 chr10 21570632 21570670 -124018618 + (CA)n Simple_repeat Simple_repeat 1 38 0 1906 254 27 24 chr10 21571445 21572146 -124017142 + L1M4 LINE L1 4594 5296 -850 * 6603 42 1 8 chr10 21572144 21573014 -124016274 - L1PA5 LINE L1 -1048 5098 4235 7406 41 1 1 chr10 21573014 21574061 -124015227 + L1PA5 LINE L1 5106 6152 -2 7962 214 23 12 chr10 21574095 21576012 -124013276 - L1PA15 LINE L1 -2 6163 4217 2297 74 14 0 chr10 21576012 21576308 -124012980 - AluY SINE Alu -11 300 1 7962 214 23 12 chr10 21576308 21577211 -124012077 - L1PA15 LINE L1 -1948 4217 3326 216 0 0 0 chr10 21577315 21577339 -124011949 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 26 0 0 0 chr10 21577339 21577365 -124011923 + AT_rich Low_complexity Low_complexity 1 26 0 2345 82 0 22 chr10 21577635 21577953 -124011335 - AluY SINE Alu 0 311 1 1577 247 87 49 chr10 21578406 21578809 -124010479 + L1MEc LINE L1 425 811 -5585 291 28 0 0 chr10 21578809 21578845 -124010443 + (TA)n Simple_repeat Simple_repeat 1 36 0 1577 247 87 49 chr10 21578845 21580050 -124009238 + L1MEc LINE L1 811 2167 -4229 2227 116 0 0 chr10 21580050 21580344 -124008944 + AluSc SINE Alu 1 294 -15 1577 247 87 49 chr10 21580344 21580635 -124008653 + L1MEc LINE L1 2167 2445 -3951 263 278 11 0 chr10 21580806 21580896 -124008392 + L1MEc LINE L1 2567 2657 -3558 955 235 29 7 chr10 21580911 21581183 -124008105 + L1MEc LINE L1 3572 3849 -2366 1494 226 7 0 chr10 21581194 21581482 -124007806 + AluJo SINE Alu 3 292 -20 24 32 0 0 chr10 21581538 21581569 -124007719 + AT_rich Low_complexity Low_complexity 1 31 0 4031 116 14 5 chr10 21582180 21582799 -124006489 + L1PA13 LINE L1 5537 6161 -2 704 109 0 179 chr10 21583317 21583501 -124005787 + MLT2A1 LTR ERVL 294 444 0 227 284 74 0 chr10 21584451 21584546 -124004742 - L1ME4a LINE L1 -53 6068 5967 7015 201 115 30 chr10 21584585 21585105 -124004183 + Tigger1 DNA MER2_type 1 475 -1943 2618 95 33 0 chr10 21585105 21585495 -124003793 + MLT2A2 LTR ERVL 1 403 -50 7015 201 115 30 chr10 21585495 21586813 -124002475 + Tigger1 DNA MER2_type 475 2417 -1 418 273 78 55 chr10 21586829 21587262 -124002026 - L1ME4a LINE L1 -234 5887 5445 439 336 75 29 chr10 21587265 21587545 -124001743 + L1M4 LINE L1 4544 4836 -1310 697 330 94 15 chr10 21587726 21587948 -124001340 + L2 LINE L2 2874 3077 -236 2077 151 3 0 chr10 21587948 21588253 -124001035 - AluSq SINE Alu -7 306 1 697 330 94 15 chr10 21588253 21588436 -124000852 + L2 LINE L2 3077 3311 -2 22 0 0 0 chr10 21588984 21589006 -124000282 + AT_rich Low_complexity Low_complexity 1 22 0 2776 88 3 0 chr10 21589507 21589869 -123999419 + THE1B LTR MaLR 1 363 -1 408 297 91 67 chr10 21590136 21590309 -123998979 - MIR SINE MIR 0 262 71 780 109 86 0 chr10 21590309 21590437 -123998851 + MER85 DNA T2_type 1 139 0 408 297 91 67 chr10 21590437 21590510 -123998778 - MIR SINE MIR -191 71 1 1117 201 122 43 chr10 21590593 21590915 -123998373 - MLT1C LTR MaLR 0 405 101 1889 159 7 19 chr10 21590915 21591224 -123998064 - AluSx SINE Alu -5 307 3 1117 201 122 43 chr10 21591224 21591326 -123997962 - MLT1C LTR MaLR -304 101 8 1726 170 18 14 chr10 21591780 21592095 -123997193 + AluSx SINE Alu 1 316 0 1569 151 14 51 chr10 21593643 21593935 -123995353 + AluJo SINE Alu 26 306 -6 1236 275 22 24 chr10 21594462 21594873 -123994415 - LTR40a LTR ERVL -14 505 96 8428 153 12 5 chr10 21594926 21595027 -123994261 + Tigger3(Golem) DNA MER2_type 1 100 -2929 2434 133 68 2 chr10 21595027 21595456 -123993832 + MSTB2 LTR MaLR 1 457 0 8428 153 12 5 chr10 21595456 21596791 -123992497 + Tigger3(Golem) DNA MER2_type 100 1447 -1582 3164 135 13 26 chr10 21596795 21597401 -123991887 + Tigger3(Golem) DNA MER2_type 1558 2155 -874 1690 152 0 17 chr10 21597773 21598069 -123991219 - L1PB4 LINE L1 -7 6149 5859 270 244 111 44 chr10 21599414 21599504 -123989784 + MIR SINE MIR 39 134 -128 23833 46 6 0 chr10 21599621 21602810 -123986478 + L1P LINE L1 1239 4446 -1700 2248 153 12 75 chr10 21603132 21603740 -123985548 - L1MCb LINE L1 -4878 1167 709 923 224 32 8 chr10 21603731 21603981 -123985307 - L1MCb LINE L1 -6152 412 157 * 23 33 0 0 chr10 21604013 21604043 -123985245 + AT_rich Low_complexity Low_complexity 1 30 0 352 293 20 27 chr10 21604392 21604542 -123984746 - MIR SINE MIR -24 238 90 655 169 19 50 chr10 21604547 21604707 -123984581 - MER33 DNA MER1_type -169 155 1 567 282 115 4 chr10 21604795 21605029 -123984259 - MIR SINE MIR 0 262 3 313 358 74 18 chr10 21605883 21606112 -123983176 - MIR SINE MIR -1 261 20 353 294 111 7 chr10 21606136 21606284 -123983004 - MIR SINE MIR -73 135 9 22 0 0 0 chr10 21606995 21607017 -123982271 + AT_rich Low_complexity Low_complexity 1 22 0 278 290 40 30 chr10 21607158 21607358 -123981930 - L1ME2 LINE L1 -232 5932 5731 1329 202 95 26 chr10 21607436 21607783 -123981505 - MLT1B LTR MaLR -19 371 1 344 304 212 0 chr10 21607810 21607994 -123981294 + MIR SINE MIR 16 238 -24 1653 183 0 11 chr10 21608044 21608318 -123980970 + AluJo SINE Alu 11 281 -31 301 383 10 0 chr10 21608339 21608532 -123980756 - L1ME2 LINE L1 -2169 5639 5445 339 318 7 61 chr10 21608776 21608924 -123980364 - MER5A DNA MER1_type 0 189 50 183 316 41 31 chr10 21609094 21609192 -123980096 + MIR3 SINE MIR 105 203 -5 349 259 127 0 chr10 21609744 21609910 -123979378 + L1ME LINE L1 5476 5662 -459 2059 136 0 3 chr10 21610201 21610487 -123978801 + AluSx SINE Alu 1 285 -27 27 0 0 0 chr10 21610487 21610514 -123978774 + AT_rich Low_complexity Low_complexity 1 27 0 251 263 0 0 chr10 21611270 21611327 -123977961 + CT-rich Low_complexity Low_complexity 2 58 0 1436 100 50 5 chr10 21611380 21611600 -123977688 + MER30 DNA MER1_type 1 230 0 21 0 0 0 chr10 21612153 21612174 -123977114 + AT_rich Low_complexity Low_complexity 1 21 0 3203 187 30 3 chr10 21613146 21613789 -123975499 - LTR62 LTR ERVK -8 711 52 2311 64 0 3 chr10 21614992 21615295 -123973993 + AluY SINE Alu 2 303 0 12300 77 3 4 chr10 21615450 21617133 -123972155 + L1P LINE L1 1 1681 -4465 38561 51 2 2 chr10 21617325 21622390 -123966898 - L1P LINE L1 -1083 5063 1 1195 214 29 63 chr10 21622542 21622626 -123966662 + MLT1A1 LTR MaLR 1 86 -279 1798 184 0 0 chr10 21622626 21622939 -123966349 - AluSx SINE Alu 0 315 3 1195 214 29 63 chr10 21622939 21623006 -123966282 + MLT1A1 LTR MaLR 86 154 -211 1836 139 78 20 chr10 21623006 21623350 -123965938 + THE1B LTR MaLR 1 364 0 1195 214 29 63 chr10 21623350 21623574 -123965714 + MLT1A1 LTR MaLR 154 365 0 1597 189 7 23 chr10 21624349 21624650 -123964638 - AluJb SINE Alu -16 296 1 225 200 20 0 chr10 21624876 21624926 -123964362 + CT-rich Low_complexity Low_complexity 2 52 0 206 209 47 0 chr10 21625167 21625210 -123964078 + MER5A DNA MER1_type 144 188 -1 685 329 27 9 chr10 21627531 21627750 -123961538 + MIR SINE MIR 1 223 -39 2223 146 72 0 chr10 21627764 21628168 -123961120 - MER1A DNA MER1_type 0 529 97 251 75 25 0 chr10 21628286 21628326 -123960962 - LTR62 LTR ERVK -668 51 11 393 318 43 2 chr10 21628781 21628951 -123960337 - MIR3 SINE MIR -44 218 33 23 68 0 0 chr10 21630170 21630214 -123959074 + AT_rich Low_complexity Low_complexity 1 44 0 4154 173 48 46 chr10 21630276 21630770 -123958518 + L1MA10 LINE L1 4456 4948 -1386 180 0 0 0 chr10 21630770 21630790 -123958498 + (CA)n Simple_repeat Simple_repeat 1 20 0 4154 173 48 46 chr10 21630790 21631413 -123957875 + L1MA10 LINE L1 4948 5569 -765 1989 135 3 0 chr10 21631413 21631820 -123957468 + AluSx SINE Alu 1 408 0 4154 173 48 46 chr10 21631820 21632268 -123957020 + L1MA10 LINE L1 5569 6032 -302 1865 141 44 56 chr10 21632268 21632609 -123956679 + MER1B DNA MER1_type 1 337 0 4154 173 48 46 chr10 21632609 21632911 -123956377 + L1MA10 LINE L1 6032 6332 -2 1343 168 23 61 chr10 21634023 21634187 -123955101 - AluJo SINE Alu -31 281 129 378 0 0 0 chr10 21634187 21634229 -123955059 + (TA)n Simple_repeat Simple_repeat 2 43 0 1343 168 23 61 chr10 21634229 21634326 -123954962 - AluJo SINE Alu -183 129 30 181 303 28 55 chr10 21636603 21636712 -123952576 - MIR SINE MIR -104 158 53 31180 48 3 1 chr10 21637026 21641959 -123947329 - L1PA4 LINE L1 -3 6152 1210 11705 28 1 15 chr10 21642603 21644769 -123944519 + L1PA4 LINE L1 3998 6152 -3 536 277 27 0 chr10 21644947 21645131 -123944157 - MER5A DNA MER1_type 0 189 1 558 307 47 43 chr10 21645222 21645479 -123943809 + MIR SINE MIR 2 259 -3 2102 104 0 44 chr10 21645479 21645796 -123943492 + AluY SINE Alu 1 303 -8 1620 302 167 7 chr10 21645856 21646538 -123942750 + L2 LINE L2 520 1310 -2004 251 347 24 16 chr10 21646634 21646758 -123942530 + LTR16C LTR ERVL 65 189 -302 1587 205 36 31 chr10 21647781 21648230 -123941058 - MLT1C LTR MaLR -9 458 8 703 271 34 30 chr10 21648771 21649040 -123940248 + MLT1I LTR MaLR 1 270 -139 23 0 0 0 chr10 21649496 21649519 -123939769 + AT_rich Low_complexity Low_complexity 1 23 0 214 370 0 12 chr10 21651099 21651180 -123938108 - MIR3 SINE MIR -9 199 120 2192 125 0 13 chr10 21651879 21652191 -123937097 - AluSq SINE Alu -5 308 1 652 180 0 23 chr10 21652229 21652357 -123936931 - MER94 DNA DNA -2 132 8 1604 123 29 48 chr10 21652531 21652841 -123936447 + L1MA1 LINE L1 5997 6300 -2 2756 222 58 9 chr10 21652987 21653744 -123935544 + L1PB3 LINE L1 5358 6151 -3 1067 229 0 8 chr10 21654240 21654484 -123934804 - L1PB4 LINE L1 -3 6153 5912 265 282 14 0 chr10 21655492 21655563 -123933725 + MIR3 SINE MIR 122 193 -15 284 250 111 76 chr10 21656091 21656235 -123933053 + MIR3 SINE MIR 13 161 -47 330 182 0 0 chr10 21656588 21656654 -123932634 + (TA)n Simple_repeat Simple_repeat 1 66 0 1632 62 5 0 chr10 21656654 21656865 -123932423 - L1PA5 LINE L1 -15 6139 5928 1780 28 5 0 chr10 21656867 21657084 -123932204 + L1P2 LINE L1 5490 5707 -447 682 196 18 105 chr10 21657738 21657967 -123931321 + MER3 DNA MER1_type 1 209 0 229 182 0 91 chr10 21657978 21658033 -123931255 - MLT1J1 LTR MaLR -393 53 4 24 0 0 0 chr10 21658636 21658660 -123930628 + AT_rich Low_complexity Low_complexity 1 24 0 700 186 32 0 chr10 21659534 21659658 -123929630 + FLAM_C SINE Alu 2 129 -14 357 174 0 0 chr10 21659659 21659728 -123929560 + (CATA)n Simple_repeat Simple_repeat 2 70 0 21 0 0 0 chr10 21660139 21660160 -123929128 + AT_rich Low_complexity Low_complexity 1 21 0 643 270 30 100 chr10 21660160 21660263 -123929025 - MIR SINE MIR -3 259 150 2347 123 34 14 chr10 21660263 21660620 -123928668 - THE1B LTR MaLR 0 364 1 643 270 30 100 chr10 21660620 21660804 -123928484 - MIR SINE MIR -112 150 3 197 257 0 0 chr10 21660841 21660876 -123928412 + L2 LINE L2 3211 3245 -27 1687 192 69 5 chr10 21661135 21661510 -123927778 - MLT1D LTR MaLR -106 399 1 180 0 0 0 chr10 21662106 21662126 -123927162 + (A)n Simple_repeat Simple_repeat 1 20 0 442 296 155 24 chr10 21662126 21662332 -123926956 + MIR SINE MIR 20 252 -10 555 271 66 6 chr10 21662978 21663159 -123926129 - Charlie8 DNA MER1_type -2193 224 33 754 152 7 7 chr10 21663941 21664079 -123925209 - L1PB2 LINE L1 -2 6149 6012 5887 264 36 18 chr10 21664184 21667705 -123921583 - L1PA13 LINE L1 -2777 4020 1 1514 188 0 0 chr10 21667720 21667996 -123921292 + L1MC/D LINE L1 5311 5586 -758 396 200 30 0 chr10 21667996 21668091 -123921197 + L1MC2 LINE L1 6242 6344 0 21 0 0 0 chr10 21668142 21668163 -123921125 + AT_rich Low_complexity Low_complexity 1 21 0 244 252 39 19 chr10 21669366 21669469 -123919819 + L1ME LINE L1 5410 5514 -648 2096 219 99 10 chr10 21669665 21670475 -123918813 - L1ME1 LINE L1 -143 6023 5135 185 309 0 0 chr10 21670906 21670961 -123918327 - MIR SINE MIR -6 256 202 369 391 21 11 chr10 21671286 21671475 -123917813 - MIR SINE MIR -49 213 23 379 272 132 44 chr10 21672480 21672730 -123916558 + L2 LINE L2 2332 2603 -711 766 178 76 23 chr10 21672841 21673105 -123916183 - MER33 DNA MER1_type 0 324 47 2222 178 19 9 chr10 21674260 21674681 -123914607 + MSTB LTR MaLR 1 425 -1 240 300 9 9 chr10 21675935 21676045 -123913243 - L1MC4 LINE L1 0 8042 7933 521 246 60 32 chr10 21676093 21676341 -123912947 - L1MC4 LINE L1 -190 7852 7598 24 0 0 0 chr10 21676347 21676371 -123912917 + AT_rich Low_complexity Low_complexity 1 24 0 269 23 0 70 chr10 21676372 21676415 -123912873 + (TTTTA)n Simple_repeat Simple_repeat 2 41 0 8923 31 0 0 chr10 21676415 21678257 -123911031 - L1PA4 LINE L1 -4 6151 4305 27722 59 2 7 chr10 21678257 21682029 -123907259 - L1PA4 LINE L1 -2388 3758 7 23 0 0 0 chr10 21682184 21682207 -123907081 + AT_rich Low_complexity Low_complexity 1 23 0 2136 123 0 3 chr10 21683120 21683421 -123905867 + AluSc SINE Alu 1 300 -9 1345 221 17 25 chr10 21684050 21684407 -123904881 + MLT1A1 LTR MaLR 1 354 -11 265 338 100 23 chr10 21685359 21685565 -123903723 - MIR SINE MIR -36 226 2 1034 311 95 7 chr10 21685698 21686351 -123902937 - L2 LINE L2 -37 3276 2557 282 143 0 0 chr10 21687093 21687142 -123902146 + (A)n Simple_repeat Simple_repeat 1 49 0 415 189 7 115 chr10 21687855 21688003 -123901285 + MLT1E2 LTR MaLR 18 149 -477 1414 135 0 0 chr10 21688952 21689152 -123900136 + AluSx SINE Alu 12 211 -101 24 0 0 0 chr10 21689152 21689176 -123900112 + AT_rich Low_complexity Low_complexity 1 24 0 1390 224 78 20 chr10 21690001 21690399 -123898889 + L1MB8 LINE L1 5406 5826 -352 * 1580 171 55 64 chr10 21690393 21690531 -123898757 + L1MB8 LINE L1 5762 5900 -278 2175 140 0 0 chr10 21690531 21690839 -123898449 - AluSq SINE Alu -5 308 1 1580 171 55 64 chr10 21690839 21691121 -123898167 + L1MB8 LINE L1 5900 6178 0 231 213 0 0 chr10 21692022 21692069 -123897219 + L1MB8 LINE L1 6132 6178 0 423 133 76 38 chr10 21692142 21692247 -123897041 - L1MB8 LINE L1 -11 6167 6059 279 0 0 0 chr10 21693336 21693367 -123895921 + (T)n Simple_repeat Simple_repeat 1 31 0 421 260 102 0 chr10 21746580 21746757 -123842531 + L1ME4a LINE L1 5750 5944 -177 23 33 0 0 chr10 21746816 21746846 -123842442 + AT_rich Low_complexity Low_complexity 1 30 0 264 100 0 0 chr10 21747887 21747927 -123841361 + (ATG)n Simple_repeat Simple_repeat 3 42 0 1999 146 7 0 chr10 21748129 21748438 -123840850 - AluSx SINE Alu 0 312 2 23 0 0 0 chr10 21748449 21748472 -123840816 + AT_rich Low_complexity Low_complexity 1 23 0 201 245 38 9 chr10 21749118 21749224 -123840064 + (TA)n Simple_repeat Simple_repeat 1 109 0 384 298 38 0 chr10 21749290 21749448 -123839840 + LTR65 LTR ERV1 1 164 -505 240 125 100 0 chr10 21749986 21750026 -123839262 + LTR65 LTR ERV1 605 648 -21 351 0 0 0 chr10 21750040 21750079 -123839209 + (CA)n Simple_repeat Simple_repeat 2 40 0 219 170 0 0 chr10 21750649 21750696 -123838592 + (AACTG)n Simple_repeat Simple_repeat 4 50 0 411 293 61 57 chr10 21751115 21751327 -123837961 - MIR SINE MIR -14 248 36 2110 157 0 0 chr10 21751453 21751765 -123837523 + AluSx SINE Alu 1 312 0 21 0 0 0 chr10 21751943 21751964 -123837324 + AT_rich Low_complexity Low_complexity 1 21 0 729 275 168 42 chr10 21752777 21753497 -123835791 - HAL1 LINE L1 0 2507 1697 655 216 42 85 chr10 21753554 21753813 -123835475 - HAL1 LINE L1 -921 1586 1339 1099 213 37 54 chr10 21753925 21754221 -123835067 - MER21B LTR ERV1 -107 756 466 1084 243 13 59 chr10 21754334 21754604 -123834684 - MER21B LTR ERV1 -573 290 34 2688 108 6 0 chr10 21754604 21754966 -123834322 + THE1B LTR MaLR 1 364 0 1084 243 13 59 chr10 21754966 21754999 -123834289 - MER21B LTR ERV1 -829 34 1 242 189 21 53 chr10 21755007 21755102 -123834186 - HAL1 LINE L1 -1163 1344 1253 308 240 62 129 chr10 21755209 21755434 -123833854 - HAL1 LINE L1 -2275 232 23 2192 205 36 71 chr10 21755435 21756068 -123833220 + LTR9 LTR ERV1 2 612 0 259 360 72 0 chr10 21758178 21758289 -123830999 + L2 LINE L2 3147 3265 -7 2153 85 4 7 chr10 21759523 21759831 -123829457 - AluSc SINE Alu 0 307 1 2621 259 126 13 chr10 21760547 21761522 -123827766 + L2 LINE L2 1812 2896 -418 269 304 140 49 chr10 21761546 21761789 -123827499 + L2 LINE L2 3049 3313 0 1045 279 97 66 chr10 21761800 21762235 -123827053 + L2 LINE L2 2422 2842 -471 793 197 0 0 chr10 21762235 21762367 -123826921 - FLAM_C SINE Alu -1 132 1 1045 279 97 66 chr10 21762367 21762816 -123826472 + L2 LINE L2 2842 3312 -1 219 69 0 0 chr10 21764029 21764058 -123825230 + (T)n Simple_repeat Simple_repeat 1 29 0 27 62 0 0 chr10 21764898 21764946 -123824342 + AT_rich Low_complexity Low_complexity 1 48 0 21 57 0 0 chr10 21765088 21765123 -123824165 + AT_rich Low_complexity Low_complexity 1 35 0 210 208 0 0 chr10 21765663 21765716 -123823572 + (CA)n Simple_repeat Simple_repeat 2 54 0 22 35 0 0 chr10 21765761 21765790 -123823498 + AT_rich Low_complexity Low_complexity 1 29 0 1699 256 156 18 chr10 21765849 21765937 -123823351 - L1MC4a LINE L1 -1732 6076 6002 1800 165 14 22 chr10 21765937 21766295 -123822993 - THE1A LTR MaLR 0 355 1 1699 256 156 18 chr10 21766295 21766929 -123822359 - L1MC4a LINE L1 -1806 6002 5254 326 320 82 70 chr10 21767181 21767753 -123821535 - L1MC4a LINE L1 -1158 4988 4410 411 304 67 42 chr10 21767889 21768202 -123821086 - HAL1b LINE L1 -807 541 221 248 269 64 57 chr10 21768294 21768435 -123820853 - MIR SINE MIR -10 252 111 196 347 0 13 chr10 21768939 21769014 -123820274 - MIR3 SINE MIR -46 162 89 27 49 0 0 chr10 21770402 21770443 -123818845 + AT_rich Low_complexity Low_complexity 1 41 0 1760 183 10 3 chr10 21770840 21771140 -123818148 - AluJo SINE Alu -6 306 5 210 208 62 0 chr10 21772973 21773021 -123816267 - L2 LINE L2 0 3272 3222 201 147 0 0 chr10 21773143 21773177 -123816111 + (CATA)n Simple_repeat Simple_repeat 2 35 0 568 270 74 38 chr10 21774853 21775079 -123814209 + MIR SINE MIR 26 256 -6 348 312 15 50 chr10 21775542 21775744 -123813544 - L2 LINE L2 0 3313 3119 4699 288 112 22 chr10 21777080 21778448 -123810840 - L2 LINE L2 -6 3307 2064 1789 156 111 26 chr10 21778448 21778827 -123810461 - MLT2D LTR ERVL 0 414 4 4699 288 112 22 chr10 21778827 21778929 -123810359 - L2 LINE L2 -1249 2064 1973 2137 99 21 0 chr10 21778929 21779211 -123810077 + AluSx SINE Alu 2 289 -23 4699 288 112 22 chr10 21779211 21780188 -123809100 - L2 LINE L2 -1340 1973 634 729 313 30 13 chr10 21780188 21780418 -123808870 - L2 LINE L2 -539 2775 2542 941 255 132 78 chr10 21780419 21780621 -123808667 - L2 LINE L2 -2616 698 508 3590 162 82 1 chr10 21780621 21781289 -123807999 + MER72 LTR ERV1 1 722 0 941 255 132 78 chr10 21781289 21781678 -123807610 - L2 LINE L2 -2806 508 75 665 280 47 4 chr10 21782188 21782424 -123806864 - L2 LINE L2 -2197 1117 872 383 269 79 95 chr10 21783021 21783326 -123805962 - MER102b DNA MER1_type -4 337 38 772 251 35 0 chr10 21783622 21783825 -123805463 - LTR16A LTR ERVL -17 433 224 255 247 21 62 chr10 21783878 21783975 -123805313 - LTR16A1 LTR ERVL -364 93 1 2316 90 76 17 chr10 21784217 21784561 -123804727 - THE1B LTR MaLR 0 364 1 193 296 111 25 chr10 21786886 21786967 -123802321 - MIR3 SINE MIR -15 193 106 714 211 0 96 chr10 21789306 21789524 -123799764 - MER51C LTR ERV1 0 640 444 489 251 68 11 chr10 21790504 21790632 -123798656 - Charlie1 DNA MER1_type 0 2761 2617 2348 96 0 0 chr10 21790632 21790925 -123798363 - AluSq SINE Alu -20 293 1 489 251 68 11 chr10 21790925 21790987 -123798301 - Charlie1 DNA MER1_type -144 2617 2560 28 29 0 0 chr10 21790987 21791022 -123798266 + AT_rich Low_complexity Low_complexity 1 35 0 383 277 62 15 chr10 21791050 21791180 -123798108 - Charlie1 DNA MER1_type -2625 136 1 533 304 144 19 chr10 21792498 21792761 -123796527 + L2 LINE L2 222 517 -2797 281 294 18 0 chr10 21792868 21792977 -123796311 - L1ME LINE L1 -362 5759 5649 16014 96 6 2 chr10 21793153 21796253 -123793035 - L1PA7 LINE L1 -1 6153 3037 1758 68 4 0 chr10 21796553 21796801 -123792487 - L1PA7 LINE L1 -4046 2100 1852 561 207 136 20 chr10 21796891 21797089 -123792199 - L1ME2 LINE L1 -16 6148 5928 412 271 99 40 chr10 21797137 21797805 -123791483 - L1MCc LINE L1 -4853 2088 1228 2048 148 5 44 chr10 21798238 21798623 -123790665 - L1MC1 LINE L1 0 6333 5964 264 291 11 40 chr10 21799058 21799233 -123790055 - MER41B LTR ERV1 -208 427 258 670 224 7 7 chr10 21801356 21801508 -123787780 + MLT1A1 LTR MaLR 10 161 -204 907 188 29 14 chr10 21801547 21801754 -123787534 + MLT1A1 LTR MaLR 156 365 0 245 231 0 0 chr10 21801767 21801819 -123787469 + MER112 DNA MER1_type 209 260 0 227 175 18 0 chr10 21802287 21802344 -123786944 + GA-rich Low_complexity Low_complexity 2 59 0 1901 130 31 14 chr10 21803835 21804127 -123785161 - AluSq SINE Alu -3 310 14 2256 111 0 16 chr10 21804350 21804665 -123784623 - AluSx SINE Alu -2 310 1 2315 167 17 14 chr10 21805015 21805435 -123783853 + MSTB LTR MaLR 1 421 -5 1336 194 22 80 chr10 21805587 21805901 -123783387 + AluJb SINE Alu 1 296 -16 2140 98 14 11 chr10 21807239 21807526 -123781762 + AluSq SINE Alu 1 288 -25 200 175 25 0 chr10 21807954 21807994 -123781294 + L2 LINE L2 3273 3313 0 455 208 8 0 chr10 21808711 21808836 -123780452 + (TG)n Simple_repeat Simple_repeat 1 126 0 551 333 127 26 chr10 21808866 21809332 -123779956 - L2 LINE L2 -346 2968 2456 2022 128 122 31 chr10 21809569 21809961 -123779327 + MSTA LTR MaLR 1 428 0 2372 104 0 3 chr10 21810398 21810707 -123778581 + AluSq SINE Alu 1 308 -5 975 179 19 24 chr10 21811404 21811611 -123777677 + MLT1C LTR MaLR 2 207 -260 193 346 122 9 chr10 21813258 21813365 -123775923 - MIR3 SINE MIR -76 132 14 22 0 0 0 chr10 21813987 21814009 -123775279 + AT_rich Low_complexity Low_complexity 1 22 0 1803 24 0 0 chr10 21814690 21814902 -123774386 + L1PA4 LINE L1 5941 6152 -3 1200 249 83 8 chr10 21817105 21817491 -123771797 + L1ME1 LINE L1 5654 6068 -98 2160 171 5 7 chr10 21817771 21818175 -123771113 - MER57A LTR ERV1 0 403 1 1185 230 115 15 chr10 21818374 21818705 -123770583 - MLT1A1 LTR MaLR 0 365 2 29 28 0 0 chr10 21819300 21819336 -123769952 + AT_rich Low_complexity Low_complexity 1 36 0 1797 193 0 0 chr10 21819338 21819633 -123769655 + AluJb SINE Alu 4 298 -14 267 153 34 0 chr10 21820042 21820101 -123769187 - MLT1A1 LTR MaLR -15 350 290 988 47 0 0 chr10 21820101 21820230 -123769058 - L1P LINE L1 -1691 4455 4327 6207 53 1 0 chr10 21820230 21820998 -123768290 + L1PA5 LINE L1 5372 6141 -13 252 0 0 0 chr10 21821002 21821030 -123768258 + (TAAA)n Simple_repeat Simple_repeat 1 28 0 1005 219 38 86 chr10 21821030 21821427 -123767861 - MLT1C LTR MaLR -56 411 34 1941 157 0 13 chr10 21821863 21822168 -123767120 - AluSx SINE Alu -11 301 1 376 254 78 56 chr10 21822201 21822343 -123766945 + MIR SINE MIR 110 254 -8 275 317 24 16 chr10 21822429 21822552 -123766736 - MIR3 SINE MIR 0 208 85 1932 123 6 63 chr10 21823029 21823347 -123765941 + AluSx SINE Alu 1 300 -12 1741 176 80 8 chr10 21823677 21824041 -123765247 + MLT1B LTR MaLR 1 390 0 2557 105 8 3 chr10 21824563 21824925 -123764363 + THE1B LTR MaLR 1 364 0 185 359 97 10 chr10 21824993 21825096 -123764192 - L2 LINE L2 -805 2509 2398 1332 182 13 33 chr10 21825180 21825482 -123763806 + L1MB7 LINE L1 5849 6144 -40 650 212 97 0 chr10 21826254 21826419 -123762869 + MER20 DNA MER1_type 39 219 0 24 32 0 0 chr10 21827508 21827539 -123761749 + AT_rich Low_complexity Low_complexity 1 31 0 287 389 25 13 chr10 21827976 21828133 -123761155 + L2 LINE L2 2735 2893 -421 2183 99 0 0 chr10 21828210 21828493 -123760795 + AluSx SINE Alu 14 296 -16 1672 172 7 21 chr10 21828518 21828803 -123760485 - AluJo SINE Alu -31 281 1 551 180 69 85 chr10 21831138 21831327 -123757961 - MER53 DNA DNA -2 187 2 2166 121 0 3 chr10 21833112 21833409 -123755879 + AluSc SINE Alu 1 296 -13 1309 237 45 28 chr10 21835990 21836153 -123753135 + L1ME1 LINE L1 5693 5852 -314 1718 123 0 0 chr10 21836153 21836389 -123752899 + AluSq SINE Alu 65 300 -13 1309 237 45 28 chr10 21836389 21836647 -123752641 + L1ME1 LINE L1 5852 6121 -45 953 244 137 14 chr10 21836664 21837088 -123752200 + L1ME1 LINE L1 5694 6184 0 253 322 122 0 chr10 21837158 21837273 -123752015 + L2 LINE L2 3136 3264 -8 410 229 16 49 chr10 21837316 21837438 -123751850 - MIR SINE MIR -30 232 115 1611 190 63 14 chr10 21838089 21838437 -123750851 - MLT1A1 LTR MaLR 0 365 1 359 331 78 13 chr10 21839092 21839246 -123750042 + MIR SINE MIR 13 176 -86 21 0 0 0 chr10 21839655 21839676 -123749612 + AT_rich Low_complexity Low_complexity 1 21 0 26 30 0 0 chr10 21839704 21839737 -123749551 + AT_rich Low_complexity Low_complexity 1 33 0 1832 211 67 4 chr10 21840722 21841262 -123748026 + MER114 LTR ERV 75 648 0 1135 234 56 36 chr10 21841267 21841900 -123747388 - L1MEc LINE L1 -3681 2534 1918 426 193 167 0 chr10 21841964 21842078 -123747210 - MER63 DNA MER1_type -302 760 2 470 302 68 0 chr10 21842174 21842439 -123746849 - L1MEc LINE L1 -5407 989 707 22 35 0 0 chr10 21843319 21843348 -123745940 + AT_rich Low_complexity Low_complexity 1 29 0 2185 137 0 0 chr10 21843375 21843682 -123745606 + AluSq SINE Alu 1 307 -6 3843 94 24 0 chr10 21845607 21846148 -123743140 - MER41A LTR ERV1 0 554 1 234 314 178 35 chr10 21846229 21846487 -123742801 + L3 LINE CR1 1257 1551 -26 2393 88 0 0 chr10 21847160 21847457 -123741831 + AluSg SINE Alu 3 299 -11 1980 133 41 49 chr10 21847852 21848219 -123741069 + THE1B LTR MaLR 1 364 0 323 256 15 12 chr10 21849681 21849763 -123739525 + MIR SINE MIR 40 123 -85 2101 128 3 0 chr10 21850516 21850813 -123738475 + AluSx SINE Alu 1 298 -14 28 0 0 0 chr10 21850818 21850846 -123738442 + AT_rich Low_complexity Low_complexity 1 28 0 1803 157 44 73 chr10 21851934 21852161 -123737127 - MER57A LTR ERV1 0 403 192 2136 121 0 25 chr10 21852161 21852476 -123736812 + AluSx SINE Alu 3 309 -3 1803 157 44 73 chr10 21852476 21852656 -123736632 - MER57A LTR ERV1 -211 192 8 997 159 18 36 chr10 21854999 21855219 -123734069 - MER4B LTR ERV1 -394 216 1 1402 206 0 65 chr10 21855856 21855989 -123733299 + AluJo SINE Alu 1 141 -171 239 0 32 0 chr10 21855989 21856020 -123733268 + (TTG)n Simple_repeat Simple_repeat 2 33 0 1983 138 3 3 chr10 21856022 21856304 -123732984 - AluSx SINE Alu -30 282 1 1402 206 0 65 chr10 21856304 21856488 -123732800 + AluJo SINE Alu 142 300 -12 1082 252 128 9 chr10 21856909 21857254 -123732034 - MLT1E LTR MaLR -2 591 206 360 0 0 0 chr10 21857696 21857736 -123731552 + (TAA)n Simple_repeat Simple_repeat 2 41 0 341 179 45 8 chr10 21857936 21858070 -123731218 + GA-rich Low_complexity Low_complexity 3 141 0 592 259 142 49 chr10 21858547 21859183 -123730105 - HAL1 LINE L1 -141 2366 1672 478 259 78 48 chr10 21859861 21859899 -123729389 + L1M4 LINE L1 2217 2252 -3894 2056 138 13 10 chr10 21859899 21860204 -123729084 + AluSx SINE Alu 1 306 -6 478 259 78 48 chr10 21860204 21860511 -123728777 + L1M4 LINE L1 2252 2590 -3556 1337 200 84 26 chr10 21860511 21860856 -123728432 - MLT1A1 LTR MaLR 0 365 1 478 259 78 48 chr10 21860856 21861097 -123728191 + L1M4 LINE L1 2590 2822 -3324 2162 135 0 0 chr10 21861726 21862029 -123727259 - AluSx SINE Alu -9 303 1 302 316 79 14 chr10 21862267 21862406 -123726882 - L1ME4a LINE L1 -27 6094 5947 25 51 0 0 chr10 21862592 21862631 -123726657 + AT_rich Low_complexity Low_complexity 1 39 0 1287 128 66 4 chr10 21862631 21862873 -123726415 - L1MA4 LINE L1 -2 6298 6042 204 97 0 0 chr10 21863747 21863778 -123725510 + (TCTCC)n Simple_repeat Simple_repeat 5 35 0 651 159 0 19 chr10 21863781 21863888 -123725400 - FLAM_A SINE Alu -34 108 4 296 206 14 0 chr10 21863937 21864010 -123725278 + L1MA10 LINE L1 6260 6333 -1 1888 208 44 13 chr10 21864012 21864540 -123724748 - L1M4c LINE L1 -3906 2478 1935 202 313 101 0 chr10 21865344 21865443 -123723845 + MIR SINE MIR 101 209 -53 251 182 15 76 chr10 21865680 21865746 -123723542 - MIR3 SINE MIR -8 200 139 1789 190 45 30 chr10 21866508 21866749 -123722539 + MLT2D LTR ERVL 1 252 -162 2052 110 0 44 chr10 21866749 21867066 -123722222 - AluSx SINE Alu -9 303 1 1789 190 45 30 chr10 21867066 21867224 -123722064 + MLT2D LTR ERVL 252 406 -8 389 286 9 9 chr10 21867972 21868077 -123721211 - MIR SINE MIR -67 141 37 23 33 0 0 chr10 21868219 21868249 -123721039 + AT_rich Low_complexity Low_complexity 1 30 0 2333 76 0 7 chr10 21868878 21869182 -123720106 + AluY SINE Alu 1 302 -9 5272 138 42 24 chr10 21869280 21870268 -123719020 - L1MA8 LINE L1 -2 6289 5285 2242 80 22 26 chr10 21871352 21871665 -123717623 - AluSx SINE Alu 0 312 1 22 35 0 0 chr10 21871906 21871935 -123717353 + AT_rich Low_complexity Low_complexity 1 29 0 1702 225 28 5 chr10 21873022 21873448 -123715840 + MER63B DNA MER1_type 1 436 0 612 269 107 5 chr10 21873456 21873653 -123715635 + MIR SINE MIR 46 262 0 2889 112 9 2 chr10 21873675 21874122 -123715166 + MER41B LTR ERV1 95 544 -91 1757 116 14 28 chr10 21874454 21874724 -123714564 + L1PA15 LINE L1 5886 6153 -12 1949 141 157 5 chr10 21874724 21875093 -123714195 - MSTA LTR MaLR 0 428 4 1757 116 14 28 chr10 21875093 21875106 -123714182 + L1PA15 LINE L1 6153 6165 0 2020 168 23 29 chr10 21875106 21875424 -123713864 + MSTB LTR MaLR 41 358 -68 1925 101 101 0 chr10 21875424 21875692 -123713596 - AluSc SINE Alu -12 297 3 2020 168 23 29 chr10 21875692 21875759 -123713529 + MSTB LTR MaLR 358 424 -2 561 270 66 21 chr10 21875905 21876146 -123713142 - MER112 DNA MER1_type -2 254 3 6940 66 0 14 chr10 21876248 21877576 -123711712 + L1PA8 LINE L1 4842 6162 -10 569 239 43 38 chr10 21878086 21878270 -123711018 - L1ME1 LINE L1 -20 6146 5962 28 0 0 0 chr10 21878276 21878304 -123710984 + AT_rich Low_complexity Low_complexity 1 28 0 1602 182 23 23 chr10 21879294 21879601 -123709687 - AluJo SINE Alu -5 307 1 1998 144 13 0 chr10 21879601 21879899 -123709389 - AluSx SINE Alu -10 302 1 206 143 29 0 chr10 21879937 21879972 -123709316 + (TATG)n Simple_repeat Simple_repeat 3 38 0 1920 141 4 0 chr10 21880482 21880758 -123708530 + AluSx SINE Alu 1 277 -35 422 0 0 36 chr10 21880790 21880845 -123708443 + (TAAA)n Simple_repeat Simple_repeat 2 54 0 1081 66 0 0 chr10 21880845 21880981 -123708307 + L1PA10 LINE L1 6032 6167 -1 296 252 78 0 chr10 21881294 21881397 -123707891 + MER117 DNA MER1_type 47 157 -40 1989 167 0 3 chr10 21881589 21881894 -123707394 - AluJb SINE Alu -6 306 3 1502 113 0 5 chr10 21882010 21882214 -123707074 - AluSc SINE Alu 0 309 107 21 0 0 0 chr10 21883191 21883212 -123706076 + AT_rich Low_complexity Low_complexity 1 21 0 350 275 98 79 chr10 21886867 21887285 -123702003 - L1MEc LINE L1 -4094 2302 1877 212 167 0 0 chr10 21887293 21887329 -123701959 + (TG)n Simple_repeat Simple_repeat 1 36 0 2246 115 0 34 chr10 21887517 21887840 -123701448 - AluSx SINE Alu 0 312 1 1958 154 0 13 chr10 21888150 21888461 -123700827 + AluJb SINE Alu 1 307 -5 1848 202 108 27 chr10 21888549 21889069 -123700219 - MER68 LTR ERV1 0 562 1 677 172 30 98 chr10 21889384 21889587 -123699701 - MER20 DNA MER1_type 0 219 31 240 299 27 61 chr10 21889681 21889828 -123699460 - MIR SINE MIR -54 208 67 636 295 98 9 chr10 21889872 21890096 -123699192 - MIR SINE MIR 0 262 19 2226 84 0 3 chr10 21892055 21892367 -123696921 - AluSx SINE Alu 0 311 1 415 294 32 105 chr10 21893902 21894273 -123695015 - L2 LINE L2 -14 3258 2915 2058 98 4 0 chr10 21896753 21897028 -123692260 - AluSg1 SINE Alu -33 276 1 2089 133 10 7 chr10 21897654 21897963 -123691325 + AluSx SINE Alu 1 310 -2 372 321 42 31 chr10 21898532 21898725 -123690563 - MIR SINE MIR -56 206 12 1547 162 29 42 chr10 21899964 21900273 -123689015 + AluJo SINE Alu 1 305 -7 6584 54 13 1 chr10 21900377 21901620 -123687668 - L1P2 LINE L1 -410 5744 4492 201 39 0 0 chr10 21901880 21901906 -123687382 + (TTG)n Simple_repeat Simple_repeat 2 27 0 796 168 0 0 chr10 21901920 21902051 -123687237 - FLAM_C SINE Alu 0 133 3 230 273 56 25 chr10 21902594 21902755 -123686533 + L1ME LINE L1 3681 3846 -2300 22 0 0 0 chr10 21902929 21902951 -123686337 + AT_rich Low_complexity Low_complexity 1 22 0 237 261 11 0 chr10 21902965 21903057 -123686231 + L1ME LINE L1 5337 5429 -2379 366 342 12 0 chr10 21903075 21903236 -123686052 + L1ME LINE L1 5582 5744 -426 1372 209 27 48 chr10 21903247 21903556 -123685732 + MLT1A1 LTR MaLR 1 302 -63 2121 148 0 3 chr10 21903556 21903866 -123685422 + AluJo SINE Alu 1 309 -3 1372 209 27 48 chr10 21903866 21903929 -123685359 + MLT1A1 LTR MaLR 302 365 0 1994 136 0 7 chr10 21904617 21904903 -123684385 + AluSx SINE Alu 1 284 -28 213 39 0 0 chr10 21904903 21904929 -123684359 + (CAAG)n Simple_repeat Simple_repeat 2 27 0 348 227 0 0 chr10 21905191 21905279 -123684009 + (TG)n Simple_repeat Simple_repeat 1 88 0 339 25 0 0 chr10 21906226 21906266 -123683022 + (TG)n Simple_repeat Simple_repeat 2 41 0 1280 231 105 43 chr10 21906268 21906688 -123682600 - MLT2B1 LTR ERVL -74 446 1 613 271 29 0 chr10 21906691 21906861 -123682427 + MER5B DNA MER1_type 4 178 0 350 360 29 29 chr10 21907333 21907472 -123681816 + L2 LINE L2 3134 3272 0 338 297 74 48 chr10 21907987 21908216 -123681072 + L2 LINE L2 3079 3313 0 4707 267 80 17 chr10 21908442 21910542 -123678746 + L1MEc LINE L1 175 2405 -3991 3426 222 44 38 chr10 21910535 21911526 -123677762 + L1M4 LINE L1 2 998 -5544 * 1024 203 0 16 chr10 21911538 21911725 -123677563 - AluJb SINE Alu -7 305 122 943 201 58 64 chr10 21911725 21912053 -123677235 + L1M4 LINE L1 1041 1366 -5176 761 284 150 18 chr10 21912070 21912457 -123676831 + MLT1G3 LTR MaLR 93 530 0 2289 108 0 0 chr10 21913804 21914101 -123675187 - AluSc SINE Alu -12 297 1 755 191 8 0 chr10 21915011 21915142 -123674146 + FLAM_A SINE Alu 1 132 -1 1694 144 3 75 chr10 21915249 21915568 -123673720 + AluSq SINE Alu 1 296 -17 771 321 116 11 chr10 21915687 21916135 -123673153 - LTR33 LTR ERVL -22 499 5 315 317 50 31 chr10 21917324 21917485 -123671803 + MIR3 SINE MIR 42 205 -3 1926 162 42 0 chr10 21917509 21917842 -123671446 + MER7A DNA MER2_type 1 345 -1 255 220 0 0 chr10 21918698 21918748 -123670540 + MIR SINE MIR 79 128 -134 1154 225 171 7 chr10 21918801 21919241 -123670047 - L1M4 LINE L1 -1253 4893 4382 3194 143 55 74 chr10 21919310 21920014 -123669274 - LTR8 LTR ERV1 0 691 1 204 365 32 32 chr10 21920191 21920317 -123668971 + L2 LINE L2 3168 3293 -20 229 345 23 11 chr10 21921252 21921339 -123667949 + MIR SINE MIR 41 128 -80 2294 114 22 13 chr10 21921707 21922078 -123667210 + THE1B LTR MaLR 1 364 0 195 381 39 35 chr10 21922393 21922624 -123666664 - L2 LINE L2 -213 3059 2828 2223 142 19 39 chr10 21922653 21922671 -123666617 - MER57A LTR ERV1 -1 402 385 2022 141 3 3 chr10 21922671 21922976 -123666312 + AluSx SINE Alu 1 305 -7 2223 142 19 39 chr10 21922976 21923367 -123665921 - MER57A LTR ERV1 -18 385 1 502 152 50 0 chr10 21925806 21925905 -123663383 + MER5A DNA MER1_type 9 112 -77 231 339 150 0 chr10 21926613 21926740 -123662548 - L3b LINE CR1 -270 1313 1168 211 237 105 26 chr10 21926741 21926817 -123662471 - MIR SINE MIR 0 262 181 2014 157 0 23 chr10 21926955 21927300 -123661988 + MER1B DNA MER1_type 1 337 0 574 319 47 14 chr10 21927989 21928202 -123661086 - MIR SINE MIR -38 224 5 368 278 35 77 chr10 21928887 21929056 -123660232 - MLT1J LTR MaLR -92 419 258 443 334 13 5 chr10 21929256 21929441 -123659847 - MIR3 SINE MIR -8 200 15 359 247 54 32 chr10 21930091 21930184 -123659104 - MIR SINE MIR -134 128 34 6367 163 38 12 chr10 21930427 21931462 -123657826 + L1MA8 LINE L1 3256 4335 -1811 1806 169 3 7 chr10 21931462 21931763 -123657525 + AluJb SINE Alu 1 300 -12 6367 163 38 12 chr10 21931763 21932065 -123657223 + L1MA8 LINE L1 4335 4628 -1518 249 109 0 0 chr10 21932094 21932140 -123657148 + (TTTA)n Simple_repeat Simple_repeat 1 46 0 40900 33 22 1 chr10 21932141 21938154 -123651134 - L1PA2 LINE L1 -13 6142 2 3783 163 75 27 chr10 21938202 21939781 -123649507 + L1MA8 LINE L1 4632 6279 -12 196 226 161 58 chr10 21939789 21939944 -123649344 - L2 LINE L2 -13 3300 3130 317 361 19 0 chr10 21941081 21941189 -123648099 - L3 LINE CR1 -371 1206 1097 716 306 65 25 chr10 21941478 21941834 -123647454 - MLT1J LTR MaLR -141 370 1 315 303 37 0 chr10 21941838 21941947 -123647341 - MIR SINE MIR -87 175 63 633 312 163 35 chr10 21942116 21942738 -123646550 + L2 LINE L2 2568 3261 -52 2155 117 0 3 chr10 21942791 21943098 -123646190 - AluSc SINE Alu -3 306 1 782 263 75 94 chr10 21943152 21943608 -123645680 - L2 LINE L2 0 3313 2867 217 337 61 10 chr10 21943606 21943704 -123645584 - L3 LINE CR1 -797 780 678 * 3359 233 78 28 chr10 21943799 21945868 -123643420 + L1MD1 LINE L1 3547 5887 -355 819 217 19 0 chr10 21945868 21946029 -123643259 + FRAM SINE Alu 1 164 -2 3359 233 78 28 chr10 21946029 21946404 -123642884 + L1MD1 LINE L1 5887 6242 0 405 261 78 9 chr10 21946766 21946996 -123642292 - L1M4 LINE L1 -1504 4642 4397 776 360 61 32 chr10 21947341 21947866 -123641422 - L3 LINE CR1 -1031 546 7 236 260 40 110 chr10 21949973 21950073 -123639215 - L2 LINE L2 -19 3294 3202 407 264 50 43 chr10 21951034 21951174 -123638114 + MIR3 SINE MIR 3 143 -65 1693 158 7 7 chr10 21951274 21951553 -123637735 - AluSx SINE Alu -5 307 29 2398 154 32 11 chr10 21951587 21952023 -123637265 + MER65A LTR ERV1 1 445 0 1770 155 47 6 chr10 21952024 21952341 -123636947 + MLT1B LTR MaLR 1 330 -60 2147 194 14 14 chr10 21952480 21952902 -123636386 + MSTB LTR MaLR 1 422 -4 569 264 0 0 chr10 21953034 21953163 -123636125 + L1ME LINE L1 5488 5616 -505 386 265 102 20 chr10 21953262 21953458 -123635830 + L1ME LINE L1 5500 5711 -410 1972 94 28 0 chr10 21953485 21953771 -123635517 - L1PB1 LINE L1 -2 6149 5856 1905 151 3 16 chr10 21954081 21954392 -123634896 + AluJo SINE Alu 1 307 -5 197 313 0 16 chr10 21957586 21957650 -123631638 + L2 LINE L2 3210 3272 0 1408 189 91 8 chr10 21958177 21958442 -123630846 + AluJo SINE Alu 1 287 -25 1916 128 34 52 chr10 21959634 21960016 -123629272 - THE1C LTR MaLR 0 375 1 206 406 28 0 chr10 21967112 21967218 -123622070 + L3 LINE CR1 1450 1558 -19 231 242 16 0 chr10 21969396 21969458 -123619830 + MIR SINE MIR 188 250 -12 21 0 0 0 chr10 21969745 21969766 -123619522 + AT_rich Low_complexity Low_complexity 1 21 0 1520 187 21 21 chr10 21970028 21970312 -123618976 + AluJo SINE Alu 2 285 -27 285 190 0 25 chr10 21970315 21970394 -123618894 - L1MC4 LINE L1 -1342 6700 6624 229 156 0 0 chr10 21970397 21970442 -123618846 - LTR66 LTR ERVL -172 438 394 2170 103 10 3 chr10 21970792 21971092 -123618196 + AluSx SINE Alu 11 312 0 1561 199 34 0 chr10 21971854 21972150 -123617138 - AluJo SINE Alu -1 311 6 224 294 98 29 chr10 21972346 21972448 -123616840 - MIR SINE MIR -44 218 110 273 119 0 0 chr10 21972585 21972627 -123616661 + (A)n Simple_repeat Simple_repeat 1 42 0 2138 119 7 10 chr10 21972981 21973284 -123616004 + AluSq SINE Alu 1 302 -11 1961 159 0 6 chr10 21974003 21974317 -123614971 - AluJb SINE Alu 0 312 1 376 172 75 0 chr10 21974961 21975054 -123614234 - L1MB4 LINE L1 -3 6177 6078 300 338 90 8 chr10 21975379 21975512 -123613776 - MIR SINE MIR -115 147 4 182 114 0 29 chr10 21976008 21976043 -123613245 + (TG)n Simple_repeat Simple_repeat 2 35 0 2164 102 16 16 chr10 21976543 21976856 -123612432 + AluSq SINE Alu 1 313 0 1432 184 10 30 chr10 21978284 21978588 -123610700 + AluJo SINE Alu 6 303 -9 1874 152 0 0 chr10 21979617 21979900 -123609388 - AluSx SINE Alu -12 300 18 3014 202 39 44 chr10 21980277 21980386 -123608902 - L1MA9 LINE L1 -30 6282 6174 225 0 0 0 chr10 21980386 21980411 -123608877 + (TG)n Simple_repeat Simple_repeat 1 25 0 3014 202 39 44 chr10 21980411 21981074 -123608214 - L1MA9 LINE L1 -138 6174 5514 1908 146 54 0 chr10 21981664 21981958 -123607330 - AluSx SINE Alu -2 310 1 243 368 140 0 chr10 21982029 21982143 -123607145 + L2 LINE L2 3178 3307 -6 192 343 48 19 chr10 21983399 21983504 -123605784 - MIR SINE MIR -71 137 30 1563 121 12 0 chr10 21983613 21983862 -123605426 + L1MA5A LINE L1 6040 6291 -6 234 0 0 0 chr10 21984274 21984300 -123604988 + (TA)n Simple_repeat Simple_repeat 2 27 0 34 24 0 0 chr10 21984419 21984460 -123604828 + AT_rich Low_complexity Low_complexity 1 41 0 569 290 159 12 chr10 21984498 21984750 -123604538 - L2 LINE L2 -1 3312 3024 1489 289 51 46 chr10 21985065 21985769 -123603519 - L2 LINE L2 -321 2992 2287 2164 128 0 0 chr10 21986032 21986328 -123602960 + AluSx SINE Alu 1 296 -16 410 294 25 103 chr10 21986883 21987243 -123602045 + L2 LINE L2 2941 3272 0 1780 154 11 3 chr10 21987505 21987791 -123601497 + AluSx SINE Alu 1 288 -24 23 0 0 0 chr10 21988520 21988543 -123600745 + AT_rich Low_complexity Low_complexity 1 23 0 693 189 172 18 chr10 21991285 21991454 -123597834 - MIR SINE MIR -5 257 63 191 254 0 36 chr10 21991797 21991852 -123597436 - L2 LINE L2 -505 2809 2757 1463 49 6 0 chr10 21992783 21992966 -123596322 - L1PA5 LINE L1 0 6154 5971 33 25 0 0 chr10 21993625 21993665 -123595623 + AT_rich Low_complexity Low_complexity 1 40 0 26 30 0 0 chr10 21993708 21993741 -123595547 + AT_rich Low_complexity Low_complexity 1 33 0 492 195 47 8 chr10 21993902 21994030 -123595258 + L1MB7 LINE L1 6052 6184 0 1300 201 42 50 chr10 21994778 21995061 -123594227 + AluJo SINE Alu 4 284 -18 327 49 0 0 chr10 21995061 21995102 -123594186 + (CA)n Simple_repeat Simple_repeat 2 42 0 1850 168 3 0 chr10 21996237 21996529 -123592759 - AluJb SINE Alu -19 293 1 1813 160 45 0 chr10 21997561 21997848 -123591440 + AluSx SINE Alu 3 302 -10 234 230 163 96 chr10 21998730 21998908 -123590380 + MIR SINE MIR 52 241 -21 293 375 50 0 chr10 21999121 21999241 -123590047 + L2 LINE L2 3146 3271 -1 1789 112 35 14 chr10 21999529 21999815 -123589473 - L1PA13 LINE L1 -13 6150 5859 180 0 0 0 chr10 22000176 22000196 -123589092 + (TTG)n Simple_repeat Simple_repeat 2 21 0 952 162 0 0 chr10 22000199 22000347 -123588941 - AluJb SINE Alu -25 287 140 24 0 0 0 chr10 22000525 22000549 -123588739 + AT_rich Low_complexity Low_complexity 1 24 0 2178 133 3 0 chr10 22001005 22001314 -123587974 + AluSx SINE Alu 1 310 -2 249 341 59 30 chr10 22001754 22001889 -123587399 - MIR3 SINE MIR -62 146 8 406 233 53 48 chr10 22001904 22002110 -123587178 + MER113 DNA MER1_type? 6 212 -309 226 225 141 14 chr10 22002527 22002598 -123586690 + MIR SINE MIR 182 261 -1 265 255 0 11 chr10 22002789 22002803 -123586485 + (TA)n Simple_repeat Simple_repeat 1 14 -79 192 97 0 0 chr10 22002803 22002834 -123586454 + (TCTA)n Simple_repeat Simple_repeat 4 34 0 265 255 0 11 chr10 22002834 22002913 -123586375 + (TA)n Simple_repeat Simple_repeat 14 93 0 353 182 13 57 chr10 22003024 22003183 -123586105 + (TA)n Simple_repeat Simple_repeat 1 152 0 1125 157 25 5 chr10 22003250 22003448 -123585840 - L1PB4 LINE L1 -1 6155 5954 2041 120 10 33 chr10 22005841 22006141 -123583147 + AluSx SINE Alu 6 298 -14 3349 73 4 0 chr10 22008098 22008552 -123580736 + L1PA13 LINE L1 5707 6162 -1 249 139 0 0 chr10 22009151 22009194 -123580094 + (GGGA)n Simple_repeat Simple_repeat 3 45 0 192 135 0 0 chr10 22009227 22009264 -123580024 + (GA)n Simple_repeat Simple_repeat 2 38 0 624 296 188 0 chr10 22009458 22009671 -123579617 - MIR SINE MIR -7 255 3 3380 18 0 0 chr10 22009673 22010058 -123579230 + L1PA3 LINE L1 5768 6152 -3 809 104 0 37 chr10 22011263 22011397 -123577891 + FRAM SINE Alu 46 174 -2 230 271 79 57 chr10 22012808 22012948 -123576340 + MLT1K LTR MaLR 441 583 -5 322 143 0 32 chr10 22013580 22013643 -123575645 - MLT1F1 LTR MaLR 0 567 507 265 220 0 0 chr10 22013702 22013752 -123575536 - MLT1I LTR MaLR -266 143 94 254 327 29 29 chr10 22014024 22014128 -123575160 - L2 LINE L2 -541 2773 2670 840 65 0 0 chr10 22014136 22014243 -123575045 + AluY SINE Alu 201 307 -4 272 271 336 11 chr10 22014251 22014513 -123574775 - L2 LINE L2 -652 2662 2316 245 163 0 0 chr10 22014916 22014959 -123574329 + MLT1L LTR MaLR 145 187 -428 313 206 137 0 chr10 22016425 22016498 -123572790 + MIR SINE MIR 71 153 -109 14911 127 28 11 chr10 22016499 22016692 -123572596 + Tigger1 DNA MER2_type 1 189 -2229 2191 103 7 0 chr10 22016692 22016984 -123572304 - AluSx SINE Alu -18 294 1 14911 127 28 11 chr10 22016984 22017009 -123572279 + Tigger1 DNA MER2_type 189 212 -2206 2212 143 6 3 chr10 22017009 22017351 -123571937 + MER61A LTR ERV1 1 343 0 14911 127 28 11 chr10 22017351 22019508 -123569780 + Tigger1 DNA MER2_type 212 2418 0 751 315 94 26 chr10 22020162 22020546 -123568742 + MLT1K LTR MaLR 167 576 -12 243 146 0 0 chr10 22020548 22020589 -123568699 + (CAT)n Simple_repeat Simple_repeat 1 41 0 249 108 0 0 chr10 22022072 22022109 -123567179 + (ATG)n Simple_repeat Simple_repeat 1 37 0 517 246 152 16 chr10 22022111 22022302 -123566986 - MLT1K LTR MaLR -12 576 360 210 370 9 9 chr10 22022700 22022808 -123566480 + MIR SINE MIR 37 144 -64 21 36 0 0 chr10 22023030 22023058 -123566230 + AT_rich Low_complexity Low_complexity 1 28 0 1914 169 54 3 chr10 22023069 22023460 -123565828 - L1MA7 LINE L1 -12 6279 5869 1537 245 33 6 chr10 22023467 22023830 -123565458 + MLT1A2 LTR MaLR 2 374 0 1737 148 62 3 chr10 22024150 22024474 -123564814 - L1MA5 LINE L1 0 6300 5958 224 165 68 29 chr10 22024786 22024889 -123564399 + (TA)n Simple_repeat Simple_repeat 2 108 0 21 0 0 0 chr10 22027624 22027645 -123561643 + AT_rich Low_complexity Low_complexity 1 21 0 1674 95 4 4 chr10 22028237 22028480 -123560808 + MER75B DNA T2_type 1 243 0 2026 144 6 54 chr10 22028914 22029268 -123560020 + MER1B DNA MER1_type 1 337 0 1824 175 25 28 chr10 22029834 22030229 -123559059 + MSTD LTR MaLR 3 396 0 358 330 0 0 chr10 22030351 22030451 -123558837 + MIR SINE MIR 157 256 -6 386 289 56 41 chr10 22030584 22030781 -123558507 - MIR3 SINE MIR -1 207 8 540 207 36 21 chr10 22031513 22031653 -123557635 + Charlie2a DNA MER1_type 913 1054 -1808 1153 242 114 31 chr10 22031687 22031955 -123557333 + Charlie2a DNA MER1_type 2235 2479 -383 2211 90 0 37 chr10 22031955 22032255 -123557033 + AluSg SINE Alu 1 289 -21 1153 242 114 31 chr10 22032255 22032540 -123556748 + Charlie2a DNA MER1_type 2479 2834 -28 180 217 0 0 chr10 22033497 22033543 -123555745 + A-rich Low_complexity Low_complexity 4 49 0 1529 75 0 0 chr10 22033861 22034062 -123555226 + L1MA3 LINE L1 5735 5935 -370 552 178 0 0 chr10 22034062 22034152 -123555136 + AluJo SINE Alu 96 185 -127 1833 176 11 11 chr10 22034152 22034504 -123554784 + L1MA3 LINE L1 5954 6305 0 22 0 0 0 chr10 22034508 22034530 -123554758 + AT_rich Low_complexity Low_complexity 1 22 0 1947 162 3 0 chr10 22035023 22035326 -123553962 - AluJo SINE Alu -8 304 1 2081 93 7 27 chr10 22035404 22035704 -123553584 + AluSc SINE Alu 1 294 -15 183 42 0 0 chr10 22035972 22035996 -123553292 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 40 0 0 0 chr10 22037256 22037296 -123551992 + AT_rich Low_complexity Low_complexity 1 40 0 1817 142 53 0 chr10 22037303 22037584 -123551704 - AluSq SINE Alu -17 296 1 187 323 46 0 chr10 22037851 22037916 -123551372 + L2 LINE L2 3186 3253 -19 728 260 113 17 chr10 22039245 22039476 -123549812 - MIR SINE MIR -2 260 8 190 226 179 24 chr10 22039783 22039867 -123549421 - MIR SINE MIR -14 248 152 23 33 0 0 chr10 22040000 22040030 -123549258 + AT_rich Low_complexity Low_complexity 1 30 0 213 39 0 0 chr10 22041023 22041049 -123548239 + (A)n Simple_repeat Simple_repeat 1 26 0 2129 87 0 7 chr10 22041663 22041940 -123547348 - AluY SINE Alu -36 275 1 1927 197 20 0 chr10 22042297 22042648 -123546640 - MER47A DNA MER2_type -7 359 2 22 0 0 0 chr10 22043324 22043346 -123545942 + AT_rich Low_complexity Low_complexity 1 22 0 638 87 0 48 chr10 22043346 22043449 -123545839 - L1MA2 LINE L1 0 6304 6207 215 327 183 27 chr10 22044162 22044425 -123544863 - L2 LINE L2 -69 3244 2941 1013 250 9 22 chr10 22045739 22045967 -123543321 - MIR SINE MIR -26 236 12 1047 175 0 5 chr10 22046673 22046867 -123542421 + L1MB3 LINE L1 5990 6182 -1 290 291 23 46 chr10 22047197 22047372 -123541916 - L1ME LINE L1 -696 5466 5296 21 0 0 0 chr10 22047476 22047497 -123541791 + AT_rich Low_complexity Low_complexity 1 21 0 672 323 30 31 chr10 22048079 22048682 -123540606 - L1ME LINE L1 -1089 5057 4456 279 0 0 0 chr10 22048772 22048803 -123540485 + (TG)n Simple_repeat Simple_repeat 2 32 0 2210 116 3 0 chr10 22050506 22050807 -123538481 + AluSx SINE Alu 1 302 -10 260 303 28 49 chr10 22051695 22051837 -123537451 - MER5A DNA MER1_type -28 161 23 3987 89 11 2 chr10 22052991 22053540 -123535748 + MER41A LTR ERV1 1 554 0 212 167 21 0 chr10 22053925 22053973 -123535315 + GA-rich Low_complexity Low_complexity 3 51 0 328 255 27 34 chr10 22054205 22054354 -123534934 - L1M4 LINE L1 -1501 4645 4498 721 294 112 42 chr10 22054709 22055181 -123534107 + MLT1K LTR MaLR 77 581 -7 2035 152 3 3 chr10 22055197 22055500 -123533788 - AluSx SINE Alu -9 303 1 425 299 16 16 chr10 22055832 22055959 -123533329 + MLT2E LTR ERVL 30 156 -472 297 0 0 0 chr10 22056180 22056213 -123533075 + (CAGC)n Simple_repeat Simple_repeat 2 34 0 22 35 0 0 chr10 22056544 22056573 -123532715 + AT_rich Low_complexity Low_complexity 1 29 0 580 293 47 16 chr10 22057643 22057834 -123531454 - MIR SINE MIR -38 224 28 2988 167 14 61 chr10 22057852 22058494 -123530794 + LTR9 LTR ERV1 1 612 0 310 266 203 16 chr10 22059689 22059817 -123529471 + MIR SINE MIR 110 261 -1 2145 120 0 0 chr10 22060542 22060841 -123528447 + AluSg1 SINE Alu 1 299 -10 185 309 49 25 chr10 22061007 22061088 -123528200 + L2 LINE L2 3174 3256 -16 326 218 128 0 chr10 22062151 22062229 -123527059 + L2 LINE L2 3185 3272 0 957 198 202 4 chr10 22062393 22062645 -123526643 + AluJo SINE Alu 1 302 0 499 207 35 12 chr10 22062649 22062818 -123526470 + GA-rich Low_complexity Low_complexity 2 174 0 26 0 0 0 chr10 22062898 22062924 -123526364 + AT_rich Low_complexity Low_complexity 1 26 0 331 279 125 0 chr10 22062942 22063046 -123526242 + L2 LINE L2 3156 3272 0 353 331 211 20 chr10 22063257 22063858 -123525430 - L3 LINE CR1 -102 1475 760 813 152 0 0 chr10 22064713 22064838 -123524450 - FLAM_C SINE Alu -8 125 1 297 278 104 26 chr10 22065227 22065342 -123523946 - L3 LINE CR1 -68 1509 1386 1003 50 14 50 chr10 22066510 22066651 -123522637 + L1PA10 LINE L1 6025 6160 -8 2114 112 0 20 chr10 22066706 22067001 -123522287 + AluSx SINE Alu 5 293 -19 829 233 60 23 chr10 22067063 22067278 -123522010 + MIR SINE MIR 3 225 -37 403 306 9 0 chr10 22067374 22067482 -123521806 - L2 LINE L2 -4 3309 3201 1797 180 7 0 chr10 22067873 22068178 -123521110 - AluJb SINE Alu -5 307 1 230 139 0 23 chr10 22071421 22071464 -123517824 - MER94 DNA DNA -92 42 1 372 209 110 68 chr10 22072844 22073035 -123516253 + MLT1J LTR MaLR 313 511 0 259 295 6 90 chr10 22074468 22074624 -123514664 + L3 LINE CR1 1029 1171 -406 1657 188 3 10 chr10 22074655 22075002 -123514286 + AluJo SINE Alu 7 351 0 2345 63 0 47 chr10 22075094 22075412 -123513876 + AluY SINE Alu 1 303 -8 354 283 15 4 chr10 22075858 22075985 -123513303 + MIR SINE MIR 43 170 -63 180 111 0 0 chr10 22076035 22076062 -123513226 + (TTG)n Simple_repeat Simple_repeat 3 29 0 369 261 292 5 chr10 22076299 22076494 -123512794 - MIR SINE MIR 0 262 12 327 49 0 0 chr10 22076938 22076979 -123512309 + (TA)n Simple_repeat Simple_repeat 1 41 0 323 298 101 38 chr10 22077204 22077362 -123511926 + MIR3 SINE MIR 30 197 -11 216 255 0 0 chr10 22077590 22077641 -123511647 + CT-rich Low_complexity Low_complexity 3 53 0 28 0 0 0 chr10 22077675 22077703 -123511585 + AT_rich Low_complexity Low_complexity 1 28 0 416 261 7 43 chr10 22079056 22079194 -123510094 - MER103 DNA DNA -11 155 23 207 114 0 0 chr10 22079211 22079246 -123510042 + (CTAAT)n Simple_repeat Simple_repeat 4 38 0 288 329 74 20 chr10 22080007 22080156 -123509132 - MIR3 SINE MIR -2 206 50 325 224 132 0 chr10 22080170 22080246 -123509042 - L2 LINE L2 -1 3271 3186 180 325 145 0 chr10 22080725 22080808 -123508480 + MIR SINE MIR 38 132 -130 2181 79 3 51 chr10 22080857 22081003 -123508285 + AluSg SINE Alu 1 126 -184 2016 110 3 67 chr10 22081003 22081331 -123507957 + AluSx SINE Alu 1 307 -5 2181 79 3 51 chr10 22081331 22081499 -123507789 + AluSg SINE Alu 126 300 -10 28 29 0 0 chr10 22081981 22082016 -123507272 + AT_rich Low_complexity Low_complexity 1 35 0 2421 60 0 13 chr10 22082583 22082881 -123506407 + AluY SINE Alu 1 294 -17 445 211 73 9 chr10 22083406 22083515 -123505773 + LTR37A LTR ERV1 52 167 -259 901 140 13 20 chr10 22083518 22083668 -123505620 - MER44D DNA MER2_type -1 604 456 4890 131 21 9 chr10 22083668 22084480 -123504808 + L1PB3 LINE L1 5331 6152 -2 827 153 131 11 chr10 22084495 22084671 -123504617 - MER44D DNA MER2_type -142 467 1 713 199 75 0 chr10 22084721 22084907 -123504381 + LTR37A LTR ERV1 225 424 -2 251 282 0 24 chr10 22086228 22086313 -123502975 + (CATA)n Simple_repeat Simple_repeat 1 83 0 207 263 42 111 chr10 22086519 22086709 -123502579 + MIR SINE MIR 20 196 -66 441 291 61 27 chr10 22086858 22087006 -123502282 - L3b LINE CR1 -16 1567 1415 1944 158 7 0 chr10 22087433 22087743 -123501545 - AluJb SINE Alu 0 312 1 2201 100 37 7 chr10 22087773 22088073 -123501215 + AluSc SINE Alu 1 309 0 627 226 226 0 chr10 22088484 22088661 -123500627 + MER20 DNA MER1_type 3 219 0 225 0 0 0 chr10 22088790 22088815 -123500473 + (A)n Simple_repeat Simple_repeat 1 25 0 232 290 134 46 chr10 22091391 22091629 -123497659 - L2 LINE L2 -741 2573 2315 22 35 0 0 chr10 22091653 22091682 -123497606 + AT_rich Low_complexity Low_complexity 1 29 0 390 256 72 8 chr10 22092073 22092198 -123497090 + MIR SINE MIR 4 136 -126 1138 167 167 26 chr10 22092286 22092628 -123496660 - Charlie5 DNA MER1_type 0 2623 2234 521 226 0 0 chr10 22092636 22092738 -123496550 - Charlie5 DNA MER1_type -2506 106 5 747 254 52 86 chr10 22092971 22093357 -123495931 + L2 LINE L2 1463 1835 -1479 1220 105 3 6 chr10 22093430 22093627 -123495661 + L1PB4 LINE L1 5581 5780 -376 183 42 0 0 chr10 22093631 22093655 -123495633 + (TA)n Simple_repeat Simple_repeat 2 25 0 2131 118 34 55 chr10 22093924 22094305 -123494983 + L1PB4 LINE L1 5782 6154 -2 1304 307 130 30 chr10 22094318 22095024 -123494264 + L2 LINE L2 2118 2894 -420 427 326 23 19 chr10 22096328 22096543 -123492745 + L2 LINE L2 2381 2596 -718 2926 63 0 11 chr10 22096587 22096967 -123492321 + L1PA8 LINE L1 5784 6159 -13 2193 119 0 13 chr10 22097828 22098131 -123491157 + AluSx SINE Alu 1 299 -13 725 306 65 32 chr10 22098753 22099184 -123490104 + MLT1J2 LTR MaLR 6 450 0 323 310 62 16 chr10 22099382 22099511 -123489777 - L2 LINE L2 -1 3271 3137 267 269 103 0 chr10 22100579 22100657 -123488631 - MIR SINE MIR -73 189 104 41242 46 2 1 chr10 22101830 22107978 -123481310 + L1PA4 LINE L1 1 6155 0 38 18 0 18 chr10 22108470 22108492 -123480796 + AT_rich Low_complexity Low_complexity 1 22 -33 2044 126 0 3 chr10 22108492 22108794 -123480494 + AluSq SINE Alu 1 301 -12 38 18 0 18 chr10 22108794 22108827 -123480461 + AT_rich Low_complexity Low_complexity 22 55 0 215 286 25 84 chr10 22109567 22109686 -123479602 + L2 LINE L2 2979 3090 -182 489 305 84 28 chr10 22110202 22110437 -123478851 + MIR SINE MIR 14 261 -1 1508 162 0 12 chr10 22110826 22111067 -123478221 - AluSg/x SINE Alu -1 311 74 324 0 0 0 chr10 22112057 22112093 -123477195 + (CA)n Simple_repeat Simple_repeat 1 36 0 802 125 307 6 chr10 22112298 22112474 -123476814 + MER30 DNA MER1_type 1 229 -1 512 55 0 0 chr10 22113476 22113549 -123475739 - L1P LINE L1 -1950 4196 4124 2242 82 0 7 chr10 22113549 22113850 -123475438 + L1PA8 LINE L1 5868 6168 -4 296 295 108 29 chr10 22114504 22114643 -123474645 + L2 LINE L2 3121 3270 -2 794 168 0 29 chr10 22115363 22115500 -123473788 + FLAM_C SINE Alu 1 133 0 2210 127 0 0 chr10 22116530 22116838 -123472450 + AluSx SINE Alu 1 308 -4 2241 136 0 0 chr10 22117002 22117343 -123471945 + AluSx SINE Alu 5 345 0 1343 171 65 85 chr10 22117476 22117874 -123471414 + MLT1B LTR MaLR 1 390 0 198 0 0 0 chr10 22117882 22117904 -123471384 + (T)n Simple_repeat Simple_repeat 1 22 0 275 363 10 0 chr10 22118222 22118324 -123470964 - L2 LINE L2 0 3272 3170 219 69 0 0 chr10 22118401 22118430 -123470858 + (A)n Simple_repeat Simple_repeat 1 29 0 180 284 86 12 chr10 22118723 22118804 -123470484 - L2 LINE L2 -45 3268 3182 1847 108 62 56 chr10 22118856 22119197 -123470091 - MER61A LTR ERV1 0 343 1 318 336 48 73 chr10 22119866 22120196 -123469092 - L2 LINE L2 -413 2901 2580 337 234 18 0 chr10 22125009 22125120 -123464168 + (TA)n Simple_repeat Simple_repeat 2 114 0 501 262 93 46 chr10 22126278 22126515 -123462773 + MIR SINE MIR 14 261 -1 396 0 0 0 chr10 22127379 22127423 -123461865 + (CA)n Simple_repeat Simple_repeat 2 45 0 748 167 0 36 chr10 22127935 22128073 -123461215 - FLAM_C SINE Alu 0 133 1 2045 137 105 3 chr10 22128682 22129062 -123460226 - MSTB1 LTR MaLR -13 419 1 405 294 69 0 chr10 22129121 22129281 -123460007 + MLT1K LTR MaLR 354 524 -64 1037 277 95 25 chr10 22129486 22130129 -123459159 - L2 LINE L2 -1 3312 2628 358 239 194 0 chr10 22131565 22131699 -123457589 + L1ME2 LINE L1 5725 5884 -280 2230 112 0 0 chr10 22131721 22132016 -123457272 + AluSx SINE Alu 1 295 -17 1652 184 0 20 chr10 22132598 22132891 -123456397 + AluJo SINE Alu 1 287 -25 30 59 0 0 chr10 22133649 22133700 -123455588 + AT_rich Low_complexity Low_complexity 1 51 0 24 32 0 0 chr10 22133843 22133874 -123455414 + AT_rich Low_complexity Low_complexity 1 31 0 2198 138 3 0 chr10 22133909 22134220 -123455068 - AluSx SINE Alu 0 312 1 724 279 90 9 chr10 22134284 22134506 -123454782 + MIR SINE MIR 3 242 -20 1934 135 10 43 chr10 22134732 22135036 -123454252 + AluJb SINE Alu 1 294 -18 24 32 0 0 chr10 22135758 22135789 -123453499 + AT_rich Low_complexity Low_complexity 1 31 0 1421 12 0 0 chr10 22135823 22135985 -123453303 - L1PA2 LINE L1 -2 6153 5992 2470 73 0 0 chr10 22135988 22136288 -123453000 - AluY SINE Alu -11 300 1 2349 93 0 19 chr10 22136838 22137150 -123452138 + AluSc SINE Alu 1 306 -3 269 333 27 9 chr10 22137518 22137617 -123451671 - MIR SINE MIR -13 249 146 1627 189 3 20 chr10 22137617 22137923 -123451365 - AluJo SINE Alu -9 303 3 269 333 27 9 chr10 22137923 22137934 -123451354 - MIR SINE MIR -116 146 137 333 267 22 74 chr10 22138438 22138573 -123450715 - MIR SINE MIR -130 132 5 1782 187 26 10 chr10 22138619 22138924 -123450364 - AluJb SINE Alu -2 310 1 23 33 0 0 chr10 22138932 22138962 -123450326 + AT_rich Low_complexity Low_complexity 1 30 0 2159 106 13 23 chr10 22140428 22140730 -123448558 + AluSx SINE Alu 1 299 -13 3485 142 10 3 chr10 22140730 22141315 -123447973 + L1PA16 LINE L1 5578 6166 0 180 0 0 0 chr10 22141938 22141958 -123447330 + (GGA)n Simple_repeat Simple_repeat 3 22 0 1787 167 14 7 chr10 22142851 22143145 -123446143 + AluJo SINE Alu 1 296 -16 784 143 0 0 chr10 22143514 22143633 -123445655 + FLAM_C SINE Alu 3 121 -22 1317 203 68 15 chr10 22144101 22144367 -123444921 - AluJo SINE Alu -30 282 3 735 169 0 0 chr10 22145348 22145466 -123443822 - FLAM_C SINE Alu -15 118 1 633 280 134 22 chr10 22145954 22146358 -123442930 + MLT1K LTR MaLR 140 588 0 210 397 0 13 chr10 22147534 22147612 -123441676 + MIR3 SINE MIR 124 200 -8 3502 135 9 8 chr10 22149094 22149619 -123439669 + MER1A DNA MER1_type 1 526 -1 24 32 0 0 chr10 22150043 22150074 -123439214 + AT_rich Low_complexity Low_complexity 1 31 0 406 307 270 10 chr10 22151604 22152015 -123437273 + L2 LINE L2 350 867 -2447 380 283 102 17 chr10 22152162 22152339 -123436949 + L2 LINE L2 864 1055 -2259 376 167 62 21 chr10 22152341 22152437 -123436851 + L1M4 LINE L1 4506 4605 -1541 2183 273 138 8 chr10 22152440 22153289 -123435999 + L2 LINE L2 1061 2019 -1295 370 214 12 24 chr10 22153273 22153357 -123435931 + L2 LINE L2 3229 3311 -2 * 367 261 114 44 chr10 22153738 22154098 -123435190 + L1M4 LINE L1 4479 4863 -1283 1250 226 148 2 chr10 22154216 22154641 -123434647 + Charlie4a DNA MER1_type 22 508 0 1773 169 35 12 chr10 22154669 22155013 -123434275 + MLT1A1 LTR MaLR 14 365 0 2357 149 50 38 chr10 22155984 22156479 -123432809 - L1PA16 LINE L1 0 6166 5666 810 302 56 57 chr10 22156593 22157133 -123432155 + LTR67 LTR ERVL 1 539 -18 2529 57 0 19 chr10 22157140 22157457 -123431831 - AluY SINE Alu 0 311 1 261 301 16 41 chr10 22157809 22157932 -123431356 - MLT1G1 LTR MaLR -16 579 460 2759 115 11 29 chr10 22158920 22159362 -123429926 - Tigger2a DNA MER2_type 0 434 1 490 274 108 32 chr10 22160802 22161034 -123428254 - MIR SINE MIR -13 249 1 189 0 0 0 chr10 22161555 22161576 -123427712 + (CTCA)n Simple_repeat Simple_repeat 1 21 0 396 0 0 0 chr10 22161846 22161890 -123427398 + (A)n Simple_repeat Simple_repeat 1 44 0 634 318 32 12 chr10 22162551 22162803 -123426485 + MIR SINE MIR 6 262 0 1987 154 0 19 chr10 22163691 22164003 -123425285 + AluJo SINE Alu 1 306 -6 218 371 0 0 chr10 22164534 22164623 -123424665 + G-rich Low_complexity Low_complexity 1 89 0 982 47 78 0 chr10 22166029 22166157 -123423131 - MER85 DNA T2_type 0 139 2 2124 126 134 11 chr10 22166879 22167260 -123422028 - MSTA LTR MaLR 0 428 1 180 0 0 0 chr10 22167378 22167398 -123421890 + (T)n Simple_repeat Simple_repeat 1 20 0 21 0 0 0 chr10 22168654 22168675 -123420613 + AT_rich Low_complexity Low_complexity 1 21 0 2426 60 0 13 chr10 22168814 22169112 -123420176 + AluY SINE Alu 1 294 -17 410 211 73 9 chr10 22169637 22169746 -123419542 + LTR37A LTR ERV1 52 167 -259 852 140 13 20 chr10 22169749 22169899 -123419389 - MER44D DNA MER2_type -1 604 456 4627 133 21 9 chr10 22169899 22170711 -123418577 + L1PB3 LINE L1 5331 6152 -2 777 152 85 12 chr10 22170737 22170902 -123418386 - MER44D DNA MER2_type -162 447 1 660 199 75 0 chr10 22170952 22171138 -123418150 + LTR37A LTR ERV1 225 424 -2 1984 114 82 17 chr10 22171967 22172319 -123416969 - THE1C LTR MaLR 0 375 1 25 65 0 0 chr10 22173164 22173210 -123416078 + AT_rich Low_complexity Low_complexity 1 46 0 203 310 69 23 chr10 22173462 22173549 -123415739 - L2 LINE L2 -13 3300 3210 691 188 27 27 chr10 22173618 22173767 -123415521 - MER33 DNA MER1_type -175 149 1 40 37 0 0 chr10 22173973 22174027 -123415261 + AT_rich Low_complexity Low_complexity 1 54 0 313 262 270 0 chr10 22174781 22174907 -123414381 - MIR SINE MIR -26 236 77 235 209 0 0 chr10 22175267 22175310 -123413978 + MER63A DNA MER1_type 1 43 -167 34 24 0 0 chr10 22175310 22175351 -123413937 + AT_rich Low_complexity Low_complexity 1 41 0 254 243 14 0 chr10 22175374 22175444 -123413844 + MER63A DNA MER1_type 140 210 0 2619 103 24 2 chr10 22175700 22176109 -123413179 - L1MA1 LINE L1 0 6302 5885 203 171 0 0 chr10 22177492 22177533 -123411755 + T-rich Low_complexity Low_complexity 1 41 0 1784 186 14 0 chr10 22177577 22177872 -123411416 + AluJo SINE Alu 1 299 -13 222 274 24 24 chr10 22177893 22177977 -123411311 - MIR SINE MIR -38 224 141 1075 157 28 6 chr10 22178984 22179162 -123410126 + AluJo SINE Alu 121 302 -10 276 102 0 0 chr10 22179573 22179622 -123409666 - Alu SINE Alu -1 301 253 761 176 0 0 chr10 22179628 22179753 -123409535 - FLAM_C SINE Alu -18 125 1 373 264 80 49 chr10 22180306 22180469 -123408819 - L1M4 LINE L1 -2195 3951 3784 1357 136 226 0 chr10 22181551 22181794 -123407494 - AluSx SINE Alu -14 298 1 5140 22 0 0 chr10 22181951 22182539 -123406749 - L1PA3 LINE L1 -5 6150 5563 30 0 0 0 chr10 22182995 22183025 -123406263 + AT_rich Low_complexity Low_complexity 1 30 0 1951 153 0 29 chr10 22183087 22183401 -123405887 - AluSx SINE Alu -7 305 1 23 0 0 0 chr10 22184599 22184622 -123404666 + AT_rich Low_complexity Low_complexity 1 23 0 484 291 54 35 chr10 22184712 22184768 -123404520 + MIR SINE MIR 8 61 -201 2218 113 3 0 chr10 22184768 22185060 -123404228 + AluSx SINE Alu 1 293 -19 484 291 54 35 chr10 22185060 22185248 -123404040 + MIR SINE MIR 61 250 -12 2035 85 7 14 chr10 22185259 22185577 -123403711 + AluY SINE Alu 1 316 0 296 279 84 84 chr10 22185938 22186117 -123403171 + MIR3 SINE MIR 28 206 -2 448 325 142 21 chr10 22186202 22186534 -123402754 + L1MC4a LINE L1 4790 5161 -985 1843 274 71 15 chr10 22186622 22187399 -123401889 + L1MC4a LINE L1 5254 6073 -1735 21 36 0 0 chr10 22187437 22187465 -123401823 + AT_rich Low_complexity Low_complexity 1 28 0 228 208 21 0 chr10 22187678 22187726 -123401562 + L1MC4a LINE L1 6611 6659 -1149 239 310 0 14 chr10 22189132 22189203 -123400085 - L2 LINE L2 -62 3251 3182 899 196 7 0 chr10 22189218 22189371 -123399917 + AluJo SINE Alu 124 277 -35 29 0 0 0 chr10 22189376 22189405 -123399883 + AT_rich Low_complexity Low_complexity 1 29 0 2259 102 3 0 chr10 22189629 22189922 -123399366 - AluSx SINE Alu -18 294 1 1675 164 3 50 chr10 22190845 22191163 -123398125 + AluJo SINE Alu 1 303 -9 273 286 247 19 chr10 22192257 22192411 -123396877 + MIR3 SINE MIR 14 202 -6 1907 156 3 31 chr10 22192964 22193285 -123396003 + AluJo SINE Alu 1 312 0 227 145 58 0 chr10 22194565 22194634 -123394654 + (TA)n Simple_repeat Simple_repeat 2 74 0 1001 142 12 6 chr10 22194651 22194820 -123394468 - MER44D DNA MER2_type 0 605 436 1603 53 61 0 chr10 22194820 22195048 -123394240 - L1P5 LINE L1 -597 5554 5313 292 151 0 0 chr10 22195037 22195090 -123394198 + L1PB1 LINE L1 6095 6147 -4 * 930 131 95 12 chr10 22195107 22195275 -123394013 - MER44D DNA MER2_type -157 452 1 352 264 31 8 chr10 22195275 22195404 -123393884 + (TA)n Simple_repeat Simple_repeat 1 132 0 537 325 30 22 chr10 22197140 22197483 -123391805 + L1MC4a LINE L1 5561 5818 -303 32 43 0 0 chr10 22197737 22197783 -123391505 + AT_rich Low_complexity Low_complexity 1 46 0 1735 157 25 7 chr10 22197784 22198065 -123391223 - AluJo SINE Alu -26 286 1 375 219 96 102 chr10 22198639 22198785 -123390503 + MER5A DNA MER1_type 1 147 -42 2381 75 3 0 chr10 22198785 22199079 -123390209 - AluY SINE Alu -16 295 1 375 219 96 102 chr10 22199079 22199119 -123390169 + MER5A DNA MER1_type 147 186 -3 21 0 0 0 chr10 22199217 22199238 -123390050 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr10 22200494 22200514 -123388774 + (A)n Simple_repeat Simple_repeat 1 20 0 2329 133 128 8 chr10 22200632 22201014 -123388274 + MSTA LTR MaLR 1 428 0 1056 47 78 0 chr10 22201737 22201865 -123387423 + MER85 DNA T2_type 2 139 0 2106 132 3 0 chr10 22253649 22253952 -123335336 + AluY SINE Alu 1 304 -7 551 284 51 33 chr10 22254021 22254301 -123334987 - LTR16A LTR ERVL -1 490 164 442 253 108 6 chr10 22254309 22254467 -123334821 - MER63A DNA MER1_type -36 174 1 22 0 0 0 chr10 22254903 22254925 -123334363 + AT_rich Low_complexity Low_complexity 1 22 0 1634 159 11 39 chr10 22254932 22255215 -123334073 + AluJo SINE Alu 5 279 -33 190 115 39 19 chr10 22255252 22255304 -123333984 + A-rich Low_complexity Low_complexity 3 55 0 3225 168 32 19 chr10 22256160 22256754 -123332534 - LTR26 LTR ERV1 -1 602 1 461 273 99 12 chr10 22256929 22257090 -123332198 + MER5B DNA MER1_type 1 175 -3 2211 113 0 0 chr10 22257618 22257955 -123331333 + AluSq SINE Alu 3 313 0 2200 108 0 0 chr10 22257959 22258247 -123331041 + AluSg SINE Alu 1 288 -22 288 227 0 0 chr10 22258959 22259047 -123330241 + (CA)n Simple_repeat Simple_repeat 2 89 0 1092 223 34 30 chr10 22259628 22259924 -123329364 + AluJo SINE Alu 2 298 -4 1699 128 4 55 chr10 22260382 22260508 -123328780 - AluSq SINE Alu -54 259 153 2613 52 7 0 chr10 22260508 22260815 -123328473 - AluY SINE Alu -2 309 1 1699 128 4 55 chr10 22260815 22260961 -123328327 - AluSq SINE Alu -160 153 1 347 271 187 23 chr10 22261317 22261531 -123327757 - MIR SINE MIR -1 261 13 899 209 0 0 chr10 22262118 22262281 -123327007 + FRAM SINE Alu 1 163 -13 191 323 30 20 chr10 22262367 22262466 -123326822 - MER5A DNA MER1_type -76 113 14 862 223 58 27 chr10 22262710 22262745 -123326543 - MIR SINE MIR -6 256 224 3579 92 4 6 chr10 22262745 22263232 -123326056 + LTR19A LTR ERV1 1 486 0 862 223 58 27 chr10 22263232 22263420 -123325868 - MIR SINE MIR -38 224 26 595 88 0 0 chr10 22263793 22263873 -123325415 - LTR26B LTR ERV1 -451 80 1 1364 168 66 31 chr10 22264019 22264327 -123324961 + L1MB7 LINE L1 5848 6184 0 1497 173 73 30 chr10 22264327 22264791 -123324497 + LTR54 LTR ERV1 1 496 -2 820 194 6 12 chr10 22264950 22265120 -123324168 - L1P3 LINE L1 -530 5624 5456 802 179 23 33 chr10 22265120 22265327 -123323961 + L1M4c LINE L1 1668 1901 -4481 569 198 0 20 chr10 22265339 22265440 -123323848 - FLAM_A SINE Alu -43 99 1 2262 189 27 50 chr10 22265440 22266328 -123322960 + L1M4c LINE L1 1894 2760 -3622 583 195 58 32 chr10 22266573 22266727 -123322561 + L1MA10 LINE L1 6177 6334 0 258 232 18 0 chr10 22266729 22266785 -123322503 + L2 LINE L2 2737 2793 -521 299 236 14 0 chr10 22266818 22266890 -123322398 + L2 LINE L2 3238 3310 -3 21 36 0 0 chr10 22266993 22267021 -123322267 + AT_rich Low_complexity Low_complexity 1 28 0 2453 172 79 16 chr10 22267035 22267541 -123321747 + L1MB8 LINE L1 5588 6125 -53 665 208 7 21 chr10 22267561 22267705 -123321583 - AluSq SINE Alu -20 293 152 1551 157 57 0 chr10 22267870 22268132 -123321156 + AluSg SINE Alu 8 284 -26 27 29 0 0 chr10 22268139 22268173 -123321115 + AT_rich Low_complexity Low_complexity 1 34 0 1111 117 6 53 chr10 22268173 22268344 -123320944 + AluSg/x SINE Alu 127 289 -21 413 213 16 63 chr10 22268434 22268561 -123320727 + MIR SINE MIR 92 212 -50 5353 90 18 42 chr10 22269438 22270315 -123318973 - L1P LINE L1 -2039 4107 3252 843 274 39 8 chr10 22270794 22271053 -123318235 - MER69 DNA AcHobo -2128 398 132 858 113 0 0 chr10 22271054 22271169 -123318119 + AluSg SINE Alu 1 115 -195 2001 144 0 0 chr10 22271171 22271456 -123317832 + AluSg SINE Alu 1 285 -25 889 142 0 68 chr10 22271494 22271699 -123317589 + AluSg SINE Alu 109 299 -13 299 281 76 76 chr10 22271904 22272167 -123317121 + LTR67 LTR ERVL 277 539 -18 2557 57 0 19 chr10 22272174 22272490 -123316798 - AluY SINE Alu -1 310 1 302 243 8 68 chr10 22272821 22272965 -123316323 - MLT1G1 LTR MaLR -2 579 460 2843 118 11 29 chr10 22273953 22274395 -123314893 - Tigger2a DNA MER2_type 0 434 1 415 260 113 35 chr10 22275854 22276067 -123313221 - MIR SINE MIR -33 229 1 189 0 0 0 chr10 22276588 22276609 -123312679 + (CTCA)n Simple_repeat Simple_repeat 1 21 0 387 0 0 0 chr10 22276879 22276922 -123312366 + (A)n Simple_repeat Simple_repeat 1 43 0 564 312 27 14 chr10 22277576 22277834 -123311454 + MIR SINE MIR 4 262 0 1981 154 0 19 chr10 22278722 22279034 -123310254 + AluJo SINE Alu 1 306 -6 218 371 0 0 chr10 22279565 22279654 -123309634 + G-rich Low_complexity Low_complexity 1 89 0 1010 47 78 0 chr10 22281060 22281188 -123308100 - MER85 DNA T2_type 0 139 2 2200 133 128 8 chr10 22281911 22282293 -123306995 - MSTA LTR MaLR 0 428 1 21 0 0 0 chr10 22283680 22283701 -123305587 + AT_rich Low_complexity Low_complexity 1 21 0 314 219 96 102 chr10 22283801 22283841 -123305447 - MER5A DNA MER1_type -3 186 147 2378 68 3 7 chr10 22283841 22284137 -123305151 + AluY SINE Alu 1 295 -16 314 219 96 102 chr10 22284137 22284283 -123305005 - MER5A DNA MER1_type -42 147 1 1727 160 25 7 chr10 22284857 22285138 -123304150 + AluJo SINE Alu 1 286 -26 32 43 0 0 chr10 22285139 22285185 -123304103 + AT_rich Low_complexity Low_complexity 1 46 0 527 324 30 22 chr10 22285439 22285782 -123303506 - L1MC4a LINE L1 -303 5818 5561 352 264 31 8 chr10 22287519 22287648 -123301640 + (TA)n Simple_repeat Simple_repeat 1 132 0 1007 131 95 12 chr10 22287648 22287816 -123301472 + MER44D DNA MER2_type 1 452 -157 309 151 0 0 chr10 22287833 22287886 -123301402 - L1PB1 LINE L1 -4 6147 6095 1612 56 65 0 chr10 22287886 22288101 -123301187 + L1P5 LINE L1 5324 5552 -599 1078 146 12 6 chr10 22288101 22288272 -123301016 + MER44D DNA MER2_type 434 605 0 227 145 58 0 chr10 22288289 22288358 -123300930 + (TA)n Simple_repeat Simple_repeat 2 74 0 1905 156 3 31 chr10 22289638 22289959 -123299329 - AluJo SINE Alu 0 312 1 225 286 247 19 chr10 22290512 22290666 -123298622 - MIR3 SINE MIR -6 202 14 1658 164 3 50 chr10 22291760 22292078 -123297210 - AluJo SINE Alu -9 303 1 2307 99 3 0 chr10 22293001 22293294 -123295994 + AluSx SINE Alu 1 294 -18 29 0 0 0 chr10 22293518 22293547 -123295741 + AT_rich Low_complexity Low_complexity 1 29 0 893 196 7 0 chr10 22293552 22293705 -123295583 - AluJo SINE Alu -35 277 124 224 310 0 14 chr10 22293720 22293791 -123295497 + L2 LINE L2 3182 3251 -62 1559 157 25 47 chr10 22294901 22295219 -123294069 - AluJo SINE Alu -1 311 1 304 321 42 31 chr10 22296458 22296651 -123292637 + MIR SINE MIR 12 206 -56 2002 130 20 3 chr10 22297220 22297521 -123291767 - AluSx SINE Alu -6 306 1 2100 98 4 0 chr10 22298148 22298423 -123290865 + AluSg1 SINE Alu 1 276 -33 439 293 32 104 chr10 22300904 22301279 -123288009 + L2 LINE L2 2915 3262 -10 2159 95 0 3 chr10 22302811 22303123 -123286165 + AluSx SINE Alu 1 311 0 631 287 105 5 chr10 22305081 22305290 -123283998 + MIR SINE MIR 19 248 -14 209 222 0 0 chr10 22305295 22305340 -123283948 + (TTA)n Simple_repeat Simple_repeat 3 47 0 226 299 27 61 chr10 22305349 22305496 -123283792 + MIR SINE MIR 67 208 -54 752 186 20 93 chr10 22305590 22305794 -123283494 + MER20 DNA MER1_type 31 219 0 2105 201 106 27 chr10 22306109 22306630 -123282658 + MER68 LTR ERV1 1 562 0 1938 154 0 13 chr10 22306718 22307029 -123282259 - AluJb SINE Alu -5 307 1 2237 115 0 28 chr10 22307339 22307660 -123281628 + AluSx SINE Alu 1 312 0 234 242 16 0 chr10 22307675 22307737 -123281551 + L1P LINE L1 1900 1962 -4184 212 167 0 0 chr10 22307851 22307887 -123281401 + (CA)n Simple_repeat Simple_repeat 1 36 0 332 275 98 79 chr10 22307895 22308313 -123280975 + L1MEc LINE L1 1877 2302 -4094 21 0 0 0 chr10 22311961 22311982 -123277306 + AT_rich Low_complexity Low_complexity 1 21 0 1461 112 0 15 chr10 22312942 22313148 -123276140 + AluSc SINE Alu 107 309 0 1935 171 0 3 chr10 22313264 22313568 -123275720 + AluJb SINE Alu 3 305 -7 354 243 78 0 chr10 22313761 22313864 -123275424 - MER117 DNA MER1_type -40 157 47 1157 66 0 0 chr10 22314177 22314313 -123274975 - L1PA10 LINE L1 -1 6167 6032 386 0 0 39 chr10 22314313 22314364 -123274924 + (TTTA)n Simple_repeat Simple_repeat 2 50 0 225 156 0 0 chr10 22314364 22314396 -123274892 - AluSx SINE Alu -18 284 253 1913 141 4 0 chr10 22314396 22314672 -123274616 - AluSx SINE Alu -35 277 1 206 143 29 0 chr10 22315182 22315217 -123274071 + (CATA)n Simple_repeat Simple_repeat 3 38 0 1951 151 13 0 chr10 22315255 22315553 -123273735 + AluSx SINE Alu 1 302 -10 1608 179 23 23 chr10 22315553 22315860 -123273428 + AluJo SINE Alu 1 307 -5 28 0 0 0 chr10 22316849 22316877 -123272411 + AT_rich Low_complexity Low_complexity 1 28 0 648 232 55 48 chr10 22316883 22317083 -123272205 + L1ME1 LINE L1 5962 6162 -20 230 245 255 46 chr10 22317314 22317510 -123271778 + HAL1 LINE L1 1347 1583 -924 7368 69 11 12 chr10 22317581 22318901 -123270387 - L1PA8 LINE L1 -10 6162 4842 610 306 50 12 chr10 22319008 22319250 -123270038 + MER112 DNA MER1_type 8 258 -2 2205 166 23 29 chr10 22319390 22319457 -123269831 - MSTB LTR MaLR -2 424 358 1861 109 101 0 chr10 22319457 22319724 -123269564 + AluSc SINE Alu 3 296 -13 2205 166 23 29 chr10 22319724 22320042 -123269246 - MSTB LTR MaLR -68 358 41 1896 116 14 28 chr10 22320042 22320055 -123269233 - L1PA15 LINE L1 0 6165 6153 2122 141 157 5 chr10 22320055 22320424 -123268864 + MSTA LTR MaLR 4 428 0 1896 116 14 28 chr10 22320424 22320694 -123268594 - L1PA15 LINE L1 -12 6153 5886 3116 112 9 2 chr10 22321026 22321473 -123267815 - MER41B LTR ERV1 -91 544 95 627 264 107 5 chr10 22321495 22321692 -123267596 - MIR SINE MIR 0 262 46 1889 228 28 5 chr10 22321700 22322126 -123267162 - MER63B DNA MER1_type 0 436 1 22 35 0 0 chr10 22323214 22323243 -123266045 + AT_rich Low_complexity Low_complexity 1 29 0 2248 80 22 26 chr10 22323484 22323797 -123265491 + AluSx SINE Alu 1 312 0 5778 143 44 9 chr10 22324882 22325377 -123263911 + L1MA8 LINE L1 5285 5761 -530 180 0 0 0 chr10 22325377 22325397 -123263891 + (CA)n Simple_repeat Simple_repeat 2 21 0 5778 143 44 9 chr10 22325397 22325872 -123263416 + L1MA8 LINE L1 5761 6289 -2 2357 76 0 7 chr10 22325970 22326274 -123263014 - AluY SINE Alu -9 302 1 24 32 0 0 chr10 22326903 22326934 -123262354 + AT_rich Low_complexity Low_complexity 1 31 0 384 286 9 9 chr10 22327076 22327181 -123262107 + MIR SINE MIR 37 141 -67 180 0 0 0 chr10 22327823 22327843 -123261445 + (A)n Simple_repeat Simple_repeat 1 20 0 1963 190 45 30 chr10 22327929 22328087 -123261201 - MLT2D LTR ERVL -8 406 252 2026 114 0 44 chr10 22328087 22328404 -123260884 + AluSx SINE Alu 1 303 -9 1963 190 45 30 chr10 22328404 22328645 -123260643 - MLT2D LTR ERVL -162 252 1 248 182 15 76 chr10 22329405 22329471 -123259817 + MIR3 SINE MIR 139 200 -8 189 313 101 0 chr10 22329708 22329807 -123259481 - MIR SINE MIR -53 209 101 2124 218 36 6 chr10 22330611 22331139 -123258149 + L1M4c LINE L1 1935 2478 -3906 328 206 14 0 chr10 22331141 22331214 -123258074 - L1MA10 LINE L1 -1 6333 6260 688 159 0 19 chr10 22331263 22331370 -123257918 + FLAM_A SINE Alu 4 108 -34 204 97 0 0 chr10 22331373 22331404 -123257884 + (GGAGA)n Simple_repeat Simple_repeat 5 35 0 1419 128 66 4 chr10 22332278 22332520 -123256768 + L1MA4 LINE L1 6042 6298 -2 25 51 0 0 chr10 22332520 22332559 -123256729 + AT_rich Low_complexity Low_complexity 1 39 0 232 266 75 11 chr10 22332792 22332886 -123256402 + HAL1b LINE L1 1232 1331 -17 2184 136 0 0 chr10 22333123 22333433 -123255855 + AluSx SINE Alu 1 310 -2 637 262 120 0 chr10 22334906 22335089 -123254199 + MIR SINE MIR 44 248 -14 286 288 64 36 chr10 22335834 22336005 -123253283 + L1ME1 LINE L1 5505 5677 -493 248 261 72 68 chr10 22336029 22336251 -123253037 + L1ME1 LINE L1 5777 5999 -167 1713 146 57 36 chr10 22336915 22337216 -123252072 - AluJb SINE Alu -5 307 1 378 111 0 0 chr10 22339782 22339836 -123249452 - MER5A DNA MER1_type -2 187 134 1326 271 69 15 chr10 22339854 22340333 -123248955 + L2 LINE L2 1559 2063 -1251 844 221 12 0 chr10 22340333 22340505 -123248783 + MLT1B LTR MaLR 1 174 -216 322 237 34 45 chr10 22340539 22340777 -123248511 + (ATATG)n Simple_repeat Simple_repeat 1 235 0 215 82 52 67 chr10 22340813 22340948 -123248340 + (TA)n Simple_repeat Simple_repeat 1 133 0 1877 135 0 80 chr10 22341759 22342086 -123247202 + AluJb SINE Alu 6 306 -6 1476 153 91 11 chr10 22342987 22343298 -123245990 + AluSx SINE Alu 1 312 0 940 174 0 0 chr10 22343298 22343453 -123245835 + AluJb SINE Alu 134 288 -24 190 172 0 0 chr10 22345034 22345063 -123244225 - L2 LINE L2 -18 3254 3226 2489 57 3 0 chr10 22346347 22346646 -123242642 - AluY SINE Alu -11 300 1 298 376 31 47 chr10 22346946 22347074 -123242214 + L3 LINE CR1 1281 1405 -172 1730 148 31 14 chr10 22347074 22347364 -123241924 + AluJb SINE Alu 1 295 -17 298 376 31 47 chr10 22347364 22347490 -123241798 + L3 LINE CR1 1405 1531 -46 764 240 203 31 chr10 22347788 22348109 -123241179 + MLT1K LTR MaLR 210 585 -3 1784 168 0 11 chr10 22348252 22348564 -123240724 - AluJo SINE Alu 0 309 1 1655 159 29 0 chr10 22350278 22350555 -123238733 + AluJo SINE Alu 9 293 -19 229 161 16 16 chr10 22350555 22350617 -123238671 + (TTA)n Simple_repeat Simple_repeat 1 62 0 459 252 160 0 chr10 22350889 22351020 -123238268 - MER5B DNA MER1_type -2 176 25 1165 233 55 70 chr10 22351052 22351184 -123238104 - MLT1C LTR MaLR -3 464 332 2052 140 13 3 chr10 22351184 22351492 -123237796 - AluSq SINE Alu -2 311 1 1165 233 55 70 chr10 22351492 22351783 -123237505 - MLT1C LTR MaLR -135 332 59 2028 149 0 0 chr10 22352083 22352378 -123236910 + AluSx SINE Alu 1 295 -17 874 166 6 19 chr10 22352553 22352710 -123236578 + FRAM SINE Alu 4 158 -18 2177 125 0 3 chr10 22352710 22353013 -123236275 + AluSx SINE Alu 1 302 -10 2293 79 0 3 chr10 22353168 22353458 -123235830 + AluY SINE Alu 1 289 -22 321 26 0 0 chr10 22353458 22353496 -123235792 + (TA)n Simple_repeat Simple_repeat 2 39 0 218 299 140 19 chr10 22354114 22354221 -123235067 + MIR SINE MIR 108 227 -35 185 260 40 0 chr10 22354191 22354241 -123235047 + L2 LINE L2 3201 3252 -20 * 1413 206 20 13 chr10 22354744 22355145 -123234143 + L1MB8 LINE L1 5512 5948 -230 2223 99 7 3 chr10 22355614 22355916 -123233372 - AluY SINE Alu -8 303 1 571 295 95 17 chr10 22355987 22356228 -123233060 + MIR SINE MIR 3 262 0 2223 99 7 3 chr10 22357519 22357821 -123231467 - AluY SINE Alu -8 303 1 1844 152 0 7 chr10 22357839 22358149 -123231139 - AluJo SINE Alu 0 308 1 3546 176 19 39 chr10 22358805 22359206 -123230082 + L1MB3 LINE L1 5219 5626 -548 2365 106 0 6 chr10 22359206 22359518 -123229770 + AluSx SINE Alu 3 312 0 3546 176 19 39 chr10 22359518 22360127 -123229161 + L1MB3 LINE L1 5626 6173 -1 2283 77 0 11 chr10 22360366 22360691 -123228597 + AluY SINE Alu 1 322 0 315 243 50 60 chr10 22362426 22362559 -123226729 - MIR SINE MIR -62 146 52 841 259 43 21 chr10 22363209 22363491 -123225797 - MARNA DNA Mariner -19 567 280 235 255 69 88 chr10 22363698 22363888 -123225400 - MARNA DNA Mariner -357 229 42 2169 126 7 3 chr10 22363888 22364198 -123225090 - AluSx SINE Alu -1 311 1 235 255 69 88 chr10 22364198 22364223 -123225065 - MARNA DNA Mariner -544 42 18 1954 218 24 27 chr10 22364430 22364989 -123224299 + L1MC4 LINE L1 6441 7089 -797 1693 248 116 8 chr10 22365024 22365524 -123223764 + L1MC4 LINE L1 7352 7905 -137 270 0 0 0 chr10 22365579 22365609 -123223679 + (A)n Simple_repeat Simple_repeat 1 30 0 2181 123 3 0 chr10 22365805 22366105 -123223183 - AluSx SINE Alu -11 301 1 231 159 116 87 chr10 22366112 22366181 -123223107 - MER21A LTR ERV1 -295 636 566 1650 124 0 0 chr10 22366647 22366873 -123222415 + AluJb SINE Alu 42 267 -45 1036 101 0 71 chr10 22367501 22367670 -123221618 + AluSg/x SINE Alu 154 310 0 1662 173 0 43 chr10 22368383 22368684 -123220604 + AluJo SINE Alu 1 288 -24 1994 152 3 0 chr10 22369539 22369841 -123219447 + AluJb SINE Alu 1 303 -9 745 239 146 58 chr10 22371031 22371263 -123218025 - MLT1I LTR MaLR 0 409 130 1447 189 60 7 chr10 22371263 22371544 -123217744 + AluJo SINE Alu 3 298 -14 745 239 146 58 chr10 22371544 22371687 -123217601 - MLT1I LTR MaLR -279 130 1 248 315 11 11 chr10 22371778 22371867 -123217421 - MER117 DNA MER1_type -107 90 2 285 278 26 17 chr10 22373015 22373130 -123216158 + L2 LINE L2 2217 2332 -982 1205 108 165 19 chr10 22373381 22373593 -123215695 - MER2 DNA MER2_type -97 248 6 244 381 127 11 chr10 22373843 22374213 -123215075 + L2 LINE L2 2222 2634 -680 1618 173 7 22 chr10 22374692 22374970 -123214318 - AluJo SINE Alu -34 278 5 216 0 0 0 chr10 22375269 22375293 -123213995 + (TTCA)n Simple_repeat Simple_repeat 3 26 0 387 0 0 0 chr10 22375629 22375672 -123213616 + (TAA)n Simple_repeat Simple_repeat 1 43 0 1650 130 4 65 chr10 22377117 22377263 -123212025 + AluSq SINE Alu 1 124 -189 2596 55 7 0 chr10 22377263 22377572 -123211716 + AluY SINE Alu 1 311 0 1650 130 4 65 chr10 22377572 22377701 -123211587 + AluSq SINE Alu 124 259 -54 323 266 79 96 chr10 22378075 22378252 -123211036 + MER5A DNA MER1_type 16 189 0 426 247 162 45 chr10 22378898 22379052 -123210236 + MIR3 SINE MIR 21 192 -16 360 0 0 0 chr10 22379531 22379571 -123209717 + (TG)n Simple_repeat Simple_repeat 2 41 0 1541 197 25 4 chr10 22379571 22379850 -123209438 - AluJo SINE Alu -27 285 1 23 0 0 0 chr10 22380154 22380177 -123209111 + AT_rich Low_complexity Low_complexity 1 23 0 2105 98 0 27 chr10 22380213 22380509 -123208779 + AluSg SINE Alu 1 288 -22 288 227 0 0 chr10 22381222 22381310 -123207978 + (CA)n Simple_repeat Simple_repeat 2 89 0 1435 193 13 27 chr10 22381891 22382192 -123207096 + AluJo SINE Alu 3 299 -13 23 0 0 0 chr10 22383006 22383029 -123206259 + AT_rich Low_complexity Low_complexity 1 23 0 598 279 97 21 chr10 22384362 22384717 -123204571 + MLT1J LTR MaLR 101 503 -8 197 315 14 41 chr10 22384956 22385029 -123204259 - L2 LINE L2 -19 3253 3183 5399 224 83 60 chr10 22385305 22385864 -123203424 - L1ME1 LINE L1 -5 6230 5685 1549 85 43 9 chr10 22385864 22386075 -123203213 - L1PA10 LINE L1 -1 6167 5950 5399 224 83 60 chr10 22386075 22386258 -123203030 - L1ME1 LINE L1 -550 5685 5508 2298 84 0 3 chr10 22386258 22386555 -123202733 - AluY SINE Alu -15 296 1 5399 224 83 60 chr10 22386555 22388226 -123201062 - L1ME1 LINE L1 -727 5508 3758 23073 74 11 2 chr10 22388228 22391951 -123197337 - L1PA6 LINE L1 -2 6152 2405 9014 89 2 5 chr10 22391951 22393185 -123196103 - L1P LINE L1 -1899 4247 3018 1022 251 130 22 chr10 22393188 22393634 -123195654 - L1ME1 LINE L1 -2453 3762 3269 8441 79 3 6 chr10 22393932 22395802 -123193486 + L1PA6 LINE L1 4278 6154 0 523 173 0 16 chr10 22396069 22396196 -123193092 + GA-rich Low_complexity Low_complexity 3 127 0 4222 225 63 35 chr10 22396898 22399220 -123190068 - L1ME1 LINE L1 -2936 3279 917 1506 226 11 58 chr10 22399224 22399605 -123189683 - MLT1A2 LTR MaLR -11 363 1 1962 243 90 55 chr10 22399605 22399714 -123189574 - L1ME1 LINE L1 -5472 924 820 1698 196 7 7 chr10 22399714 22400020 -123189268 - AluJo SINE Alu -6 306 1 1962 243 90 55 chr10 22400020 22400764 -123188524 - L1ME1 LINE L1 -5576 820 42 626 274 63 38 chr10 22400837 22401074 -123188214 + MIR SINE MIR 3 245 -17 426 209 64 0 chr10 22402311 22402421 -123186867 - L1MC4 LINE L1 0 8042 7926 233 254 35 21 chr10 22402421 22402563 -123186725 + (TA)n Simple_repeat Simple_repeat 2 145 0 * 251 153 38 61 chr10 22402465 22402596 -123186692 + (TATAA)n Simple_repeat Simple_repeat 1 128 0 1418 249 120 43 chr10 22402656 22403137 -123186151 - L1MC4 LINE L1 -150 7892 7449 1794 169 3 17 chr10 22403137 22403438 -123185850 + AluJo SINE Alu 1 297 -15 294 29 0 0 chr10 22403438 22403473 -123185815 + (TA)n Simple_repeat Simple_repeat 2 36 0 1418 249 120 43 chr10 22403473 22403708 -123185580 - L1MC4 LINE L1 -592 7450 7120 207 0 0 0 chr10 22403729 22403752 -123185536 + (A)n Simple_repeat Simple_repeat 1 23 0 265 386 58 0 chr10 22404648 22404819 -123184469 - L3 LINE CR1 -1 1576 1396 2143 123 0 0 chr10 22405053 22405376 -123183912 - AluSx SINE Alu 0 323 1 206 241 35 17 chr10 22406775 22406891 -123182397 + (TA)n Simple_repeat Simple_repeat 2 119 0 1644 189 3 26 chr10 22407721 22408033 -123181255 + AluJo SINE Alu 1 305 -7 357 125 0 0 chr10 22408245 22408301 -123180987 + (CA)n Simple_repeat Simple_repeat 1 56 0 195 261 92 0 chr10 22409613 22409678 -123179610 - MIR3 SINE MIR -25 183 113 267 156 45 97 chr10 22409700 22409742 -123179546 + L1MC5 LINE L1 6876 6919 -1090 2089 124 0 10 chr10 22409742 22410048 -123179240 + AluSg SINE Alu 1 303 -7 267 156 45 97 chr10 22410048 22410138 -123179150 + L1MC5 LINE L1 6919 7007 -1002 439 306 10 14 chr10 22410214 22410423 -123178865 + L1MC5 LINE L1 6984 7191 -770 574 244 35 103 chr10 22410575 22411087 -123178201 + L1MC5 LINE L1 7260 7736 -225 1200 134 13 38 chr10 22412076 22412315 -123176973 + L1MCa LINE L1 1701 1933 -4493 216 0 0 0 chr10 22412321 22412345 -123176943 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 576 198 0 20 chr10 22412360 22412461 -123176827 - FLAM_A SINE Alu -43 99 1 5103 217 24 24 chr10 22412461 22414474 -123174814 + L1MCa LINE L1 1938 3951 -2475 4480 179 30 9 chr10 22415027 22416226 -123173062 - L1MB7 LINE L1 -19 6165 4940 511 283 109 30 chr10 22416492 22416722 -123172566 + MIR SINE MIR 15 262 0 2137 126 3 13 chr10 22416989 22417291 -123171997 + AluSx SINE Alu 1 299 -13 247 293 75 35 chr10 22417884 22418058 -123171230 + MARNA DNA Mariner 104 284 -302 246 400 23 17 chr10 22419192 22419367 -123169921 + MER5A DNA MER1_type 13 188 -1 895 209 0 0 chr10 22419378 22419541 -123169747 - FRAM SINE Alu -13 163 1 424 271 187 23 chr10 22420129 22420343 -123168945 + MIR SINE MIR 13 261 -1 1468 179 69 35 chr10 22420699 22420989 -123168299 + AluJo SINE Alu 1 300 -12 275 67 44 0 chr10 22420989 22421034 -123168254 + GA-rich Low_complexity Low_complexity 1 47 0 431 311 196 9 chr10 22421643 22421862 -123167426 - MIR SINE MIR 0 262 3 22 0 0 0 chr10 22421866 22421888 -123167400 + AT_rich Low_complexity Low_complexity 1 22 0 1891 113 13 50 chr10 22422915 22423216 -123166072 + AluSx SINE Alu 1 290 -22 21 0 0 0 chr10 22423218 22423239 -123166049 + AT_rich Low_complexity Low_complexity 1 21 0 1791 73 0 0 chr10 22423784 22424017 -123165271 + L1PA8 LINE L1 5938 6170 -2 1774 215 73 18 chr10 22424034 22424583 -123164705 + L1MC4 LINE L1 7463 8041 -1 263 376 97 18 chr10 22425553 22425718 -123163570 + L3b LINE CR1 1368 1545 -38 1141 138 69 62 chr10 22425726 22425986 -123163302 + MER1B DNA MER1_type 78 339 0 197 83 28 0 chr10 22426034 22426070 -123163218 + (TG)n Simple_repeat Simple_repeat 1 37 0 2296 108 3 0 chr10 22426213 22426518 -123162770 + AluSq SINE Alu 1 306 -7 349 326 57 14 chr10 22426684 22426825 -123162463 + MIR3 SINE MIR 42 188 -20 2115 131 0 3 chr10 22427490 22427795 -123161493 + AluSx SINE Alu 1 304 -8 187 319 112 35 chr10 22427797 22427913 -123161375 + MIR SINE MIR 29 153 -55 371 345 125 8 chr10 22428115 22428492 -123160796 + L1MC4a LINE L1 5412 5832 -1976 315 224 0 0 chr10 22428526 22428584 -123160704 + L2 LINE L2 3256 3313 0 316 308 72 37 chr10 22428594 22428808 -123160480 - MIR SINE MIR -43 219 3 212 211 0 0 chr10 22429086 22429124 -123160164 - L2 LINE L2 -16 3256 3219 187 366 98 0 chr10 22430366 22430549 -123158739 + L2 LINE L2 1656 1856 -1458 295 301 228 52 chr10 22430926 22431251 -123158037 - L2 LINE L2 -1 3312 2931 290 197 14 26 chr10 22431286 22431369 -123157919 + MER21A LTR ERV1 1 83 -780 242 158 134 85 chr10 22431464 22431546 -123157742 + MER21A LTR ERV1 70 155 -776 2157 123 0 7 chr10 22431562 22431871 -123157417 - AluSc SINE Alu -2 307 1 2589 188 66 88 chr10 22431912 22432335 -123156953 + MER21A LTR ERV1 115 513 -418 2203 130 0 0 chr10 22432335 22432636 -123156652 - AluSx SINE Alu -11 301 1 2589 188 66 88 chr10 22432636 22433028 -123156260 + MER21A LTR ERV1 513 912 -19 28 29 0 0 chr10 22433200 22433235 -123156053 + AT_rich Low_complexity Low_complexity 1 35 0 730 258 60 95 chr10 22434517 22435105 -123154183 + L2 LINE L2 2652 3313 0 820 163 8 0 chr10 22435515 22435644 -123153644 + FRAM SINE Alu 39 168 -8 454 213 16 63 chr10 22436161 22436288 -123153000 - MIR SINE MIR -50 212 92 1112 128 0 52 chr10 22436378 22436550 -123152738 - AluSg/x SINE Alu -21 291 129 27 29 0 0 chr10 22436550 22436584 -123152704 + AT_rich Low_complexity Low_complexity 1 34 0 1921 118 48 0 chr10 22436591 22436862 -123152426 - AluSg SINE Alu -26 284 1 2288 121 0 0 chr10 22437226 22437524 -123151764 + AluSx SINE Alu 1 298 -14 2830 90 11 54 chr10 22437874 22437968 -123151320 - L1MA2 LINE L1 0 6304 6208 2218 96 0 0 chr10 22437968 22438261 -123151027 + AluSg SINE Alu 1 293 -17 2830 90 11 54 chr10 22438261 22438631 -123150657 - L1MA2 LINE L1 -96 6208 5860 2050 130 3 7 chr10 22440337 22440636 -123148652 + AluSx SINE Alu 1 298 -14 1710 128 13 99 chr10 22440794 22441176 -123148112 + MLT1B LTR MaLR 37 385 -5 298 381 95 6 chr10 22441206 22441374 -123147914 - L3 LINE CR1 -1282 295 113 403 173 90 147 chr10 22441383 22441539 -123147749 - MIR SINE MIR 0 262 116 247 207 69 0 chr10 22441541 22441599 -123147689 - MIR SINE MIR -115 147 86 840 158 0 0 chr10 22444231 22444385 -123144903 - FLAM_C SINE Alu 0 154 1 1178 272 71 67 chr10 22444877 22445565 -123143723 + MER21B LTR ERV1 24 714 -149 476 240 80 29 chr10 22445994 22446169 -123143119 - MIR SINE MIR -4 258 75 256 325 120 40 chr10 22446161 22446435 -123142853 - L2 LINE L2 -417 2897 2602 * 210 296 56 0 chr10 22448186 22448257 -123141031 - MIR SINE MIR -57 205 131 278 77 0 0 chr10 22448650 22448689 -123140599 + 5S rRNA rRNA 2 40 -81 2253 51 0 0 chr10 22449030 22449303 -123139985 + AluY SINE Alu 39 311 0 399 271 130 5 chr10 22449303 22449495 -123139793 + MER112 DNA MER1_type 35 250 -10 361 348 87 5 chr10 22449615 22449822 -123139466 - MIR SINE MIR -7 255 32 607 276 45 71 chr10 22451541 22451820 -123137468 + L1MC4 LINE L1 7630 7915 -127 2255 80 0 7 chr10 22451820 22452121 -123137167 + AluY SINE Alu 1 299 -12 360 0 0 0 chr10 22452121 22452161 -123137127 + (TA)n Simple_repeat Simple_repeat 2 41 0 607 276 45 71 chr10 22452161 22452304 -123136984 + L1MC4 LINE L1 7913 8042 0 2194 112 3 0 chr10 22454107 22454419 -123134869 + AluSp SINE Alu 1 313 0 666 250 7 20 chr10 22454613 22454765 -123134523 + MIR SINE MIR 108 257 -5 24 0 0 0 chr10 22456897 22456921 -123132367 + GC_rich Low_complexity Low_complexity 1 24 0 570 283 35 45 chr10 22458218 22458416 -123130872 + MIR SINE MIR 43 238 -24 1776 146 0 42 chr10 22459046 22459354 -123129934 - AluJo SINE Alu -15 297 3 701 220 56 84 chr10 22460156 22460489 -123128799 + MLT1I LTR MaLR 98 547 -2 2356 73 3 0 chr10 22460578 22460881 -123128407 - AluY SINE Alu -7 304 1 258 261 261 13 chr10 22461311 22461468 -123127820 - L2 LINE L2 -1 3312 3117 1830 165 124 81 chr10 22461969 22462150 -123127138 + MLT1D LTR MaLR 1 173 -332 3880 123 36 2 chr10 22462150 22462733 -123126555 + LTR26 LTR ERV1 1 603 0 1830 165 124 81 chr10 22462733 22462909 -123126379 + MLT1D LTR MaLR 173 387 -118 2003 144 3 0 chr10 22462909 22463215 -123126073 + AluSx SINE Alu 1 307 -5 1830 165 124 81 chr10 22463215 22463340 -123125948 + MLT1D LTR MaLR 387 505 0 25 0 0 0 chr10 22464002 22464027 -123125261 + AT_rich Low_complexity Low_complexity 1 25 0 1935 144 0 3 chr10 22464033 22464331 -123124957 + AluSp SINE Alu 1 297 -16 313 140 0 0 chr10 22464351 22464401 -123124887 + L1PA8 LINE L1 6122 6171 -1 1624 181 0 13 chr10 22465243 22465542 -123123746 + AluJo SINE Alu 1 295 -17 1340 158 60 54 chr10 22465724 22466040 -123123248 - MER33 DNA MER1_type -2 322 5 239 308 0 33 chr10 22466299 22466416 -123122872 + GA-rich Low_complexity Low_complexity 4 176 0 2398 118 19 16 chr10 22466798 22467161 -123122127 + THE1B LTR MaLR 1 364 0 359 247 205 8 chr10 22467772 22468011 -123121277 + L1ME4a LINE L1 5814 6099 -22 2256 82 7 7 chr10 22468541 22468847 -123120441 - AluSx SINE Alu -2 310 5 22 0 0 0 chr10 22469285 22469307 -123119981 + AT_rich Low_complexity Low_complexity 1 22 0 201 39 0 0 chr10 22469307 22469333 -123119955 + (CA)n Simple_repeat Simple_repeat 2 27 0 22 0 0 0 chr10 22469548 22469570 -123119718 + AT_rich Low_complexity Low_complexity 1 22 0 390 21 0 0 chr10 22469570 22469617 -123119671 + (CA)n Simple_repeat Simple_repeat 2 48 0 424 189 0 63 chr10 22469620 22469715 -123119573 + MLT1A1 LTR MaLR 24 112 -253 1748 158 41 35 chr10 22469729 22469866 -123119422 + MER2 DNA MER2_type 1 136 -209 1711 109 0 0 chr10 22469866 22470096 -123119192 - MER30 DNA MER1_type 0 230 1 1748 158 41 35 chr10 22470096 22470300 -123118988 + MER2 DNA MER2_type 136 344 -1 384 22 0 0 chr10 22470301 22470346 -123118942 + (TG)n Simple_repeat Simple_repeat 2 46 0 245 167 100 0 chr10 22470365 22470425 -123118863 - L1MCa LINE L1 -4495 1931 1866 204 125 0 0 chr10 22470437 22470469 -123118819 + (CATA)n Simple_repeat Simple_repeat 2 33 0 932 129 13 13 chr10 22470493 22470642 -123118646 + THE1C LTR MaLR 216 375 0 2558 195 29 65 chr10 22470646 22470794 -123118494 - L1MCa LINE L1 -5798 628 476 416 66 0 16 chr10 22470794 22470855 -123118433 + (TTA)n Simple_repeat Simple_repeat 1 60 0 1839 135 0 0 chr10 22470863 22471130 -123118158 - AluJb SINE Alu -45 267 1 2558 195 29 65 chr10 22471130 22471603 -123117685 - L1MCa LINE L1 -5957 469 21 1900 120 38 0 chr10 22471915 22472206 -123117082 - AluSq SINE Alu -11 302 1 1230 217 119 65 chr10 22472359 22472768 -123116520 + MLT1D LTR MaLR 1 441 -64 2221 76 0 16 chr10 22472768 22473083 -123116205 - AluY SINE Alu -1 310 1 1230 217 119 65 chr10 22473083 22473152 -123116136 + MLT1D LTR MaLR 441 505 0 252 352 88 8 chr10 22473365 22473490 -123115798 + L2 LINE L2 3137 3271 -1 1648 175 3 16 chr10 22473514 22473822 -123115466 + AluJo SINE Alu 1 304 -8 901 238 71 8 chr10 22474528 22474768 -123114520 - MIR SINE MIR -5 257 3 186 43 0 0 chr10 22475462 22475485 -123113803 + (TTCA)n Simple_repeat Simple_repeat 2 24 0 1411 171 38 7 chr10 22475505 22475792 -123113496 - AluSx SINE Alu -9 303 8 28 0 0 0 chr10 22475935 22475963 -123113325 + AT_rich Low_complexity Low_complexity 1 28 0 1326 173 0 0 chr10 22476147 22476367 -123112921 - AluSq SINE Alu -93 220 1 706 223 0 0 chr10 22476377 22476507 -123112781 - FLAM_C SINE Alu 0 133 4 215 181 21 32 chr10 22476605 22476699 -123112589 + CT-rich Low_complexity Low_complexity 2 94 0 274 204 9 37 chr10 22476754 22476862 -123112426 + CT-rich Low_complexity Low_complexity 2 106 0 1441 155 44 44 chr10 22477322 22477619 -123111669 - AluJo SINE Alu -11 301 5 788 158 30 8 chr10 22477621 22477754 -123111534 - AluJo SINE Alu -175 137 2 2143 117 0 0 chr10 22477930 22478237 -123111051 - AluSg SINE Alu -3 307 1 1092 139 28 0 chr10 22478470 22478685 -123110603 - AluSp SINE Alu -12 301 81 200 222 0 16 chr10 22478943 22479006 -123110282 + T-rich Low_complexity Low_complexity 1 62 0 1057 147 80 46 chr10 22480139 22480266 -123109022 + L1MA4A LINE L1 6056 6177 -126 2191 118 3 0 chr10 22480266 22480570 -123108718 + AluSx SINE Alu 1 305 -7 1057 147 80 46 chr10 22480570 22480680 -123108608 + L1MA4A LINE L1 6177 6301 -2 1380 141 3 141 chr10 22480952 22481124 -123108164 + AluJo SINE Alu 1 100 -212 1931 125 0 7 chr10 22481124 22481434 -123107854 + AluSx SINE Alu 1 308 0 1380 141 3 141 chr10 22481434 22481622 -123107666 + AluJo SINE Alu 100 312 0 1963 166 17 17 chr10 22481851 22482195 -123107093 + MER49 LTR ERV1 1 344 -579 2871 118 4 21 chr10 22482350 22482808 -123106480 - MER1A DNA MER1_type 0 529 1 895 333 32 3 chr10 22482814 22483096 -123106192 - L2 LINE L2 -571 2743 2454 1610 161 54 0 chr10 22483121 22483401 -123105887 - AluJb SINE Alu -17 295 1 203 204 0 19 chr10 22483532 22483586 -123105702 + (TA)n Simple_repeat Simple_repeat 2 54 0 233 234 21 43 chr10 22483587 22483681 -123105607 + L1MC4 LINE L1 6614 6705 -1337 294 159 0 0 chr10 22483694 22483763 -123105525 + (TA)n Simple_repeat Simple_repeat 2 70 0 332 247 47 12 chr10 22483765 22483850 -123105438 + L1MC4 LINE L1 6614 6701 -1341 324 247 21 62 chr10 22483793 22483890 -123105398 - L1MC4 LINE L1 -1336 6706 6614 * 350 241 46 11 chr10 22483882 22483969 -123105319 + L1MC4 LINE L1 6614 6703 -1339 342 242 55 0 chr10 22483890 22483981 -123105307 - L1MC4 LINE L1 -1335 6707 6612 * 369 0 0 0 chr10 22484062 22484103 -123105185 + (TAGA)n Simple_repeat Simple_repeat 2 42 0 252 0 0 0 chr10 22484144 22484172 -123105116 + (GACTG)n Simple_repeat Simple_repeat 4 31 0 2152 174 62 8 chr10 22484269 22484655 -123104633 + MSTB LTR MaLR 20 426 0 1487 177 0 93 chr10 22484865 22485028 -123104260 - MLT1D LTR MaLR -192 313 197 3880 123 36 2 chr10 22485028 22485611 -123103677 - LTR26 LTR ERV1 0 603 1 1487 177 0 93 chr10 22485611 22485792 -123103496 - MLT1D LTR MaLR -308 197 1 258 261 261 13 chr10 22486293 22486450 -123102838 + L2 LINE L2 3117 3312 -1 2216 64 3 0 chr10 22486880 22487223 -123102065 + AluY SINE Alu 1 344 0 642 200 7 37 chr10 22487429 22487564 -123101724 - FLAM_A SINE Alu 0 142 12 1824 116 11 14 chr10 22487626 22487911 -123101377 + AluSx SINE Alu 27 310 -2 484 171 0 0 chr10 22488068 22488144 -123101144 - AluJ/FRAM SINE Alu -20 292 217 225 94 0 0 chr10 22488171 22488203 -123101085 + (A)n Simple_repeat Simple_repeat 1 32 0 705 172 78 0 chr10 22488207 22488335 -123100953 + AluJo SINE Alu 6 143 -169 2807 85 3 0 chr10 22489158 22489562 -123099726 - L1PA2 LINE L1 0 6155 5770 1836 160 3 10 chr10 22489575 22489888 -123099400 - AluJb SINE Alu -1 311 1 2310 126 87 0 chr10 22490357 22490747 -123098541 - L1MA9 LINE L1 -354 5958 5535 2170 110 0 3 chr10 22490993 22491292 -123097996 + AluSx SINE Alu 1 298 -14 22 0 0 0 chr10 22492814 22492836 -123096452 + AT_rich Low_complexity Low_complexity 1 22 0 252 121 0 0 chr10 22492836 22492869 -123096419 + Alu SINE Alu 1 33 -269 223 242 17 75 chr10 22493206 22493326 -123095962 + C-rich Low_complexity Low_complexity 5 117 0 318 260 22 50 chr10 22493328 22493509 -123095779 + (CCCCG)n Simple_repeat Simple_repeat 3 178 0 230 256 30 45 chr10 22493596 22493729 -123095559 + C-rich Low_complexity Low_complexity 3 133 0 817 161 9 85 chr10 22493910 22494134 -123095154 - AluJo SINE Alu -105 207 1 1009 159 53 43 chr10 22494427 22494634 -123094654 + MER3 DNA MER1_type 1 209 0 1319 157 25 103 chr10 22494911 22495047 -123094241 + AluYb8 SINE Alu 3 148 -170 2148 114 0 3 chr10 22495047 22495353 -123093935 + AluSx SINE Alu 1 305 -7 1319 157 25 103 chr10 22495353 22495535 -123093753 + AluYb8 SINE Alu 148 296 -22 328 200 0 15 chr10 22495817 22495882 -123093406 - MER82 DNA MER2_type -580 73 10 1869 158 0 3 chr10 22495890 22496188 -123093100 + AluSx SINE Alu 9 305 -7 679 231 30 0 chr10 22496275 22496409 -123092879 + LTR16C LTR ERVL 146 283 -208 1090 202 20 0 chr10 22496410 22496613 -123092675 + MER58A DNA MER1_type 2 208 -16 683 198 198 0 chr10 22496626 22496808 -123092480 + LTR16C LTR ERVL 274 491 0 1659 181 8 77 chr10 22496946 22497105 -123092183 + MLT1A1 LTR MaLR 1 169 -196 1987 108 63 0 chr10 22497105 22497392 -123091896 + AluSx SINE Alu 6 310 -2 1659 181 8 77 chr10 22497392 22497597 -123091691 + MLT1A1 LTR MaLR 169 340 -25 261 0 0 0 chr10 22497597 22497626 -123091662 + (T)n Simple_repeat Simple_repeat 1 29 0 460 214 39 65 chr10 22498192 22498236 -123091052 + MIR SINE MIR 113 157 -105 2368 200 10 79 chr10 22498236 22498340 -123090948 + MER87 LTR ERV1 1 111 -430 2241 97 0 0 chr10 22498340 22498640 -123090648 - AluSq SINE Alu -13 300 1 2368 200 10 79 chr10 22498640 22499116 -123090172 + MER87 LTR ERV1 111 541 0 460 214 39 65 chr10 22499116 22499225 -123090063 + MIR SINE MIR 157 262 0 1624 172 47 0 chr10 22500648 22500944 -123088344 - AluJb SINE Alu -2 310 1 435 259 68 132 chr10 22502190 22502730 -123086558 - MLT1L LTR MaLR -37 577 46 1547 125 0 26 chr10 22503019 22503251 -123086037 + AluSg/x SINE Alu 85 310 -2 750 235 6 0 chr10 22503288 22503458 -123085830 + MIR SINE MIR 92 262 0 1864 126 0 30 chr10 22503464 22503596 -123085692 - AluSq SINE Alu -52 261 140 2298 109 0 0 chr10 22503596 22503900 -123085388 - AluSq SINE Alu -9 304 1 1864 126 0 30 chr10 22503900 22504036 -123085252 - AluSq SINE Alu -173 140 1 699 186 0 0 chr10 22504063 22504181 -123085107 - FRAM SINE Alu -58 118 1 402 233 75 55 chr10 22504195 22504341 -123084947 + LTR16C LTR ERVL 341 489 -2 2334 75 0 0 chr10 22504437 22504718 -123084570 - AluY SINE Alu -29 282 2 255 272 71 65 chr10 22504826 22504995 -123084293 - MIR SINE MIR -21 241 72 1744 195 65 24 chr10 22505215 22505480 -123083808 + MER63B DNA MER1_type 1 291 -771 1621 184 0 27 chr10 22505480 22505774 -123083514 - AluJo SINE Alu -26 286 1 1744 195 65 24 chr10 22505774 22505923 -123083365 + MER63B DNA MER1_type 291 432 -4 1925 151 7 0 chr10 22505955 22506240 -123083048 + AluSx SINE Alu 1 287 -25 2299 68 51 3 chr10 22506312 22506605 -123082683 - AluSg SINE Alu -3 307 1 744 214 107 41 chr10 22506685 22506881 -123082407 + MER3 DNA MER1_type 1 209 0 995 177 17 0 chr10 22507708 22507883 -123081405 + AluSg/x SINE Alu 131 308 -2 1636 169 59 0 chr10 22507897 22508169 -123081119 + AluJo SINE Alu 1 288 -24 2285 108 0 3 chr10 22508474 22508771 -123080517 + AluSq SINE Alu 1 296 -17 1835 112 93 0 chr10 22509104 22509373 -123079915 + AluSx SINE Alu 1 294 -18 417 39 0 0 chr10 22509638 22509689 -123079599 + (CA)n Simple_repeat Simple_repeat 2 52 0 387 0 0 0 chr10 22509988 22510031 -123079257 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 726 111 0 0 chr10 22510399 22510498 -123078790 - AluS SINE Alu -212 100 2 872 148 0 7 chr10 22510601 22510736 -123078552 + AluJb SINE Alu 85 218 -94 244 170 0 19 chr10 22510736 22510789 -123078499 + FAM SINE Alu 125 176 -3 1545 186 0 39 chr10 22510799 22511111 -123078177 + AluJo SINE Alu 1 300 -12 1160 117 0 6 chr10 22511457 22511639 -123077649 - AluSg/x SINE Alu 0 302 122 2111 102 25 0 chr10 22511650 22511924 -123077364 - AluY SINE Alu -30 281 1 224 280 204 0 chr10 22512062 22512155 -123077133 + L2 LINE L2 3149 3260 -12 1068 224 86 4 chr10 22512156 22512411 -123076877 + L1ME1 LINE L1 5487 5762 -404 577 151 0 0 chr10 22512431 22512517 -123076771 + AluJ/FLAM SINE Alu 2 87 -225 1428 140 91 30 chr10 22512517 22512782 -123076506 + AluJo SINE Alu 21 301 -11 1031 165 41 37 chr10 22512783 22512797 -123076491 + L1ME1 LINE L1 5776 5788 -378 2255 130 122 10 chr10 22512797 22513182 -123076106 + MSTA LTR MaLR 1 428 0 1031 165 41 37 chr10 22513182 22513385 -123075903 + L1ME1 LINE L1 5788 5994 -172 298 327 0 35 chr10 22513405 22513518 -123075770 - MLT1J LTR MaLR -99 412 304 727 182 0 8 chr10 22513523 22513655 -123075633 - L1MB4 LINE L1 -143 6037 5907 1299 147 0 15 chr10 22514022 22514219 -123075069 - AluJb SINE Alu -34 278 85 3663 151 10 16 chr10 22514330 22514941 -123074347 - L1MB4 LINE L1 -259 5924 5318 899 211 6 0 chr10 22514946 22515121 -123074167 - FRAM SINE Alu 0 176 1 1230 216 26 53 chr10 22515121 22515501 -123073787 - L1MB4 LINE L1 -820 5326 4957 239 103 13 51 chr10 22515510 22515588 -123073700 + (TTTTA)n Simple_repeat Simple_repeat 3 77 0 199 26 0 79 chr10 22515653 22515691 -123073597 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 2073 146 3 0 chr10 22515711 22516006 -123073282 + AluSx SINE Alu 1 296 -16 3223 88 20 24 chr10 22516027 22516482 -123072806 + MLT2A2 LTR ERVL 1 453 0 1964 92 81 15 chr10 22516558 22516829 -123072459 + AluSq SINE Alu 1 289 -24 348 209 198 0 chr10 22517390 22517476 -123071812 + MLT1C LTR MaLR 1 103 -364 1513 175 111 47 chr10 22517494 22517837 -123071451 + MLT1A1 LTR MaLR 1 365 0 2212 118 3 0 chr10 22518603 22518900 -123070388 + AluSp SINE Alu 1 298 -15 1011 125 0 7 chr10 22518909 22519053 -123070235 + AluSp SINE Alu 1 143 -170 1117 110 0 0 chr10 22520014 22520168 -123069120 - AluSq SINE Alu -159 154 1 857 129 62 33 chr10 22520168 22520308 -123068980 + L1MA9 LINE L1 6127 6268 -32 2139 87 20 47 chr10 22520308 22520606 -123068682 - AluY SINE Alu -20 291 2 857 129 62 33 chr10 22520606 22520639 -123068649 + L1MA9 LINE L1 6268 6299 -1 1638 158 15 29 chr10 22520656 22520929 -123068359 + AluJo SINE Alu 12 280 -32 185 361 108 8 chr10 22520962 22521092 -123068196 + MIR SINE MIR 50 192 -70 191 302 0 0 chr10 22521685 22521738 -123067550 + L3 LINE CR1 1339 1391 -186 731 245 224 14 chr10 22522275 22522565 -123066723 + MLT1E LTR MaLR 3 353 -240 1108 117 31 162 chr10 22522567 22522781 -123066507 - Tigger2a DNA MER2_type -2274 444 276 1983 146 0 0 chr10 22522781 22523068 -123066220 - AluSx SINE Alu -25 287 1 1108 117 31 162 chr10 22523068 22523143 -123066145 - Tigger2a DNA MER2_type -2442 276 193 48 0 0 0 chr10 22523147 22523195 -123066093 + AT_rich Low_complexity Low_complexity 1 48 0 1290 113 0 49 chr10 22523195 22523399 -123065889 - Tigger2a DNA MER2_type -240 194 1 894 208 4 85 chr10 22523399 22523622 -123065666 + MLT1E LTR MaLR 360 563 -30 433 279 171 8 chr10 22523699 22523957 -123065331 + LTR16C LTR ERVL 188 487 -4 2260 86 0 71 chr10 22523980 22524306 -123064982 - AluSp SINE Alu -10 303 1 1529 160 0 4 chr10 22524307 22524544 -123064744 - AluSg/x SINE Alu -6 306 71 2309 107 0 7 chr10 22524775 22525085 -123064203 - AluSx SINE Alu -4 308 1 280 281 12 0 chr10 22525089 22525171 -123064117 + MIR SINE MIR 102 184 -78 362 207 0 35 chr10 22525397 22525484 -123063804 - FLAM SINE Alu -1 132 49 1687 168 3 13 chr10 22525734 22526032 -123063256 + AluJo SINE Alu 1 295 -17 394 240 20 60 chr10 22526276 22526426 -123062862 - MIR3 SINE MIR -30 178 35 982 216 19 9 chr10 22526628 22526841 -123062447 - MER58B DNA MER1_type 0 341 127 811 153 42 58 chr10 22526851 22527040 -123062248 - AluJo SINE Alu 0 312 127 2046 116 42 0 chr10 22527060 22527344 -123061944 + AluSx SINE Alu 1 296 -16 1846 176 10 0 chr10 22528472 22528768 -123060520 - AluJo SINE Alu -13 299 1 314 250 0 0 chr10 22529065 22529129 -123060159 + MER91 DNA MER1_type 127 190 0 240 221 12 58 chr10 22529207 22529293 -123059995 + MLT1K LTR MaLR 486 567 -21 2411 93 0 0 chr10 22530497 22530798 -123058490 - AluSg SINE Alu -9 301 1 2211 113 0 0 chr10 22530802 22531139 -123058149 - AluSq SINE Alu 0 313 3 461 273 99 12 chr10 22531667 22531828 -123057460 - MER5B DNA MER1_type -3 175 1 3268 165 32 19 chr10 22532003 22532597 -123056691 + LTR26 LTR ERV1 1 602 -1 190 115 39 19 chr10 22533453 22533505 -123055783 + T-rich Low_complexity Low_complexity 3 55 0 1634 159 11 39 chr10 22533542 22533825 -123055463 - AluJo SINE Alu -33 279 5 22 0 0 0 chr10 22533832 22533854 -123055434 + AT_rich Low_complexity Low_complexity 1 22 0 442 253 108 6 chr10 22534290 22534448 -123054840 + MER63A DNA MER1_type 1 174 -36 551 284 51 33 chr10 22534456 22534736 -123054552 + LTR16A LTR ERVL 164 490 -1 2456 98 0 0 chr10 22534805 22535110 -123054178 - AluSx SINE Alu -7 305 1 1506 147 105 0 chr10 22535321 22535587 -123053701 + AluJo SINE Alu 1 294 -18 1857 146 121 34 chr10 22535960 22536433 -123052855 - MER69 DNA AcHobo 0 2526 2013 485 280 69 26 chr10 22536411 22536600 -123052688 - MER69 DNA AcHobo -641 585 389 * 2544 62 7 0 chr10 22536948 22537257 -123052031 - AluY SINE Alu 0 311 1 388 308 34 27 chr10 22538220 22538366 -123050922 + LTR67 LTR ERVL 4 150 -407 771 283 118 33 chr10 22538499 22538747 -123050541 - LTR16C LTR ERVL -12 479 189 1275 189 55 120 chr10 22538747 22539164 -123050124 + MLT1B LTR MaLR 1 390 0 771 283 118 33 chr10 22539164 22539279 -123050009 - LTR16C LTR ERVL -302 189 85 527 191 84 0 chr10 22539437 22539568 -123049720 + LTR67 LTR ERVL 411 552 -5 612 267 113 39 chr10 22539740 22540129 -123049159 + L1ME4a LINE L1 5582 5999 -122 3030 182 39 20 chr10 22541033 22541458 -123047830 - LTR26E LTR ERV1 0 622 180 2251 131 0 0 chr10 22541458 22541770 -123047518 - AluSx SINE Alu 0 312 1 3030 182 39 20 chr10 22541770 22541954 -123047334 - LTR26E LTR ERV1 -442 180 1 824 250 74 46 chr10 22542030 22542314 -123046974 + LTR33 LTR ERVL 38 329 -192 3926 138 25 0 chr10 22542454 22543042 -123046246 - LTR26 LTR ERV1 0 603 1 408 303 28 0 chr10 22543042 22543184 -123046104 - MLT1J2 LTR MaLR -52 398 253 629 224 25 25 chr10 22543217 22543378 -123045910 - MLT1J2 LTR MaLR -281 169 9 313 306 81 8 chr10 22543536 22543660 -123045628 - MLT1J LTR MaLR -146 365 233 610 66 11 44 chr10 22543784 22543875 -123045413 - MER53 DNA DNA 0 189 102 241 333 0 0 chr10 22543962 22544040 -123045248 - MLT1L LTR MaLR -537 78 1 421 348 29 22 chr10 22544050 22544323 -123044965 + MLT1L LTR MaLR 210 484 -131 2176 121 7 7 chr10 22544606 22544911 -123044377 + AluSq SINE Alu 1 305 -8 1777 164 33 7 chr10 22545693 22545997 -123043291 + AluJb SINE Alu 1 312 0 296 172 66 25 chr10 22546505 22546627 -123042661 + (TA)n Simple_repeat Simple_repeat 2 128 0 241 194 54 31 chr10 22546656 22546785 -123042503 + (TA)n Simple_repeat Simple_repeat 1 132 0 242 208 56 28 chr10 22547534 22547606 -123041682 - MIR SINE MIR -20 242 169 309 113 14 28 chr10 22548627 22548698 -123040590 + (TA)n Simple_repeat Simple_repeat 2 71 0 201 241 0 0 chr10 22548859 22548913 -123040375 + GA-rich Low_complexity Low_complexity 3 56 0 664 195 0 27 chr10 22548962 22549147 -123040141 + (CA)n Simple_repeat Simple_repeat 1 180 0 229 330 9 0 chr10 22549205 22549314 -123039974 - L1ME4a LINE L1 -21 6100 5991 985 162 7 0 chr10 22549651 22549805 -123039483 + FRAM SINE Alu 1 146 -30 593 228 43 5 chr10 22549945 22550129 -123039159 - MER69 DNA AcHobo -57 2469 2279 1763 174 0 34 chr10 22550139 22550467 -123038821 - AluJb SINE Alu 0 318 1 1160 286 70 15 chr10 22550470 22550869 -123038419 - MER69 DNA AcHobo -1974 552 132 858 113 0 0 chr10 22550870 22550985 -123038303 + AluSg SINE Alu 1 115 -195 2191 139 0 0 chr10 22550987 22551297 -123037991 + AluSg SINE Alu 1 310 0 1499 87 0 5 chr10 22551305 22551500 -123037788 + AluSg SINE Alu 102 295 -15 407 185 185 0 chr10 22551500 22551619 -123037669 - MER69 DNA AcHobo -1085 141 1 475 319 31 12 chr10 22552047 22552210 -123037078 + MIR SINE MIR 20 185 -77 721 264 81 65 chr10 22553071 22553605 -123035683 - MER34 LTR ERV1 0 542 1 25 65 0 0 chr10 22553724 22553770 -123035518 + AT_rich Low_complexity Low_complexity 1 46 0 2462 156 75 22 chr10 22553972 22554409 -123034879 - L1 LINE L1 -1357 4789 4320 2235 110 7 0 chr10 22554409 22554709 -123034579 - AluSq SINE Alu -10 303 2 2462 156 75 22 chr10 22554709 22554776 -123034512 - L1 LINE L1 -1826 4320 4258 * 3658 151 0 2 chr10 22554768 22555372 -123033916 + L1 LINE L1 4764 5366 -780 1731 156 11 3 chr10 22555375 22555657 -123033631 + AluJo SINE Alu 5 288 -24 832 108 58 7 chr10 22555664 22555803 -123033485 + L1MA9 LINE L1 6161 6306 -6 2051 131 7 0 chr10 22555996 22556286 -123033002 - AluSx SINE Alu -4 308 17 1227 137 0 0 chr10 22556683 22556858 -123032430 - AluSq SINE Alu -138 175 1 180 321 84 46 chr10 22556864 22556995 -123032293 + MER5B DNA MER1_type 41 176 -2 1526 145 83 18 chr10 22557893 22558169 -123031119 - AluJo SINE Alu -17 295 2 494 61 0 0 chr10 22558170 22558236 -123031052 - L1 LINE L1 -1823 4323 4258 * 3658 151 0 2 chr10 22558228 22558832 -123030456 + L1 LINE L1 4764 5366 -780 1731 156 11 3 chr10 22558835 22559117 -123030171 + AluJo SINE Alu 5 288 -24 832 108 58 7 chr10 22559124 22559263 -123030025 + L1MA9 LINE L1 6161 6306 -6 2051 131 7 0 chr10 22559456 22559746 -123029542 - AluSx SINE Alu -4 308 17 948 102 0 22 chr10 22560121 22560258 -123029030 + AluJo SINE Alu 1 134 -178 931 96 0 22 chr10 22560714 22560849 -123028439 + FLAM_C SINE Alu 1 132 -1 7371 125 28 6 chr10 22561146 22561314 -123027974 - L1MA3 LINE L1 0 7724 7561 2210 130 0 0 chr10 22561314 22561613 -123027675 - AluSq SINE Alu -14 299 1 7371 125 28 6 chr10 22561613 22563682 -123025606 - L1MA3 LINE L1 -163 7561 5438 * 11920 145 26 1 chr10 22563659 22565505 -123023783 - L1MA3 LINE L1 -5657 1908 15 1319 27 0 22 chr10 22566207 22566391 -123022897 + (TTC)n Simple_repeat Simple_repeat 1 180 0 1621 209 3 3 chr10 22566693 22567004 -123022284 - AluJo SINE Alu -1 311 1 339 255 112 81 chr10 22567504 22567665 -123021623 + MLT1I LTR MaLR 244 409 0 1758 186 0 0 chr10 22567689 22567979 -123021309 + AluJb SINE Alu 1 290 -22 201 247 216 10 chr10 22568268 22568365 -123020923 + MIR SINE MIR 35 151 -111 226 352 80 0 chr10 22568753 22568878 -123020410 + MIR SINE MIR 20 154 -108 2130 130 0 0 chr10 22569155 22569455 -123019833 - AluSx SINE Alu -12 300 1 359 279 70 8 chr10 22569652 22569781 -123019507 - L2 LINE L2 0 3272 3136 2456 90 3 0 chr10 22569808 22570119 -123019169 + AluSx SINE Alu 1 312 0 1966 166 17 17 chr10 22570348 22570692 -123018596 + MER49 LTR ERV1 1 344 -579 2867 117 5 7 chr10 22570847 22571256 -123018032 - MER1A DNA MER1_type 0 529 122 799 333 32 3 chr10 22571311 22571593 -123017695 - L2 LINE L2 -571 2743 2454 1746 157 54 0 chr10 22571618 22571898 -123017390 - AluJb SINE Alu -17 295 1 203 204 0 19 chr10 22572029 22572083 -123017205 + (TA)n Simple_repeat Simple_repeat 1 53 0 247 234 21 43 chr10 22572084 22572178 -123017110 + L1MC4 LINE L1 6614 6705 -1337 741 144 27 0 chr10 22572191 22572493 -123016795 + (TA)n Simple_repeat Simple_repeat 1 310 0 369 0 0 0 chr10 22572559 22572600 -123016688 + (TAGA)n Simple_repeat Simple_repeat 2 42 0 252 0 0 0 chr10 22572641 22572669 -123016619 + (GACTG)n Simple_repeat Simple_repeat 4 31 0 2139 174 62 8 chr10 22572766 22573152 -123016136 + MSTB LTR MaLR 20 426 0 1902 150 0 10 chr10 22573563 22573857 -123015431 + AluJo SINE Alu 1 291 -21 1708 138 87 0 chr10 22573889 22574165 -123015123 - AluSx SINE Alu -12 300 1 2283 115 0 10 chr10 22574887 22575199 -123014089 - AluSx SINE Alu -3 309 1 748 267 36 24 chr10 22575360 22575607 -123013681 - MIR SINE MIR 0 262 13 2231 110 0 0 chr10 22575724 22576055 -123013233 - AluSx SINE Alu 0 312 1 2092 130 0 0 chr10 22576164 22576449 -123012839 - AluSx SINE Alu -19 293 9 2306 84 9 37 chr10 22577048 22577370 -123011918 + AluSq SINE Alu 1 313 0 2448 71 3 0 chr10 22578366 22578660 -123010628 + AluY SINE Alu 1 295 -16 1835 112 93 0 chr10 22578992 22579261 -123010027 + AluSx SINE Alu 1 294 -18 417 39 0 0 chr10 22579526 22579577 -123009711 + (CA)n Simple_repeat Simple_repeat 2 52 0 387 0 0 0 chr10 22579876 22579919 -123009369 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 1979 159 0 10 chr10 22580550 22580864 -123008424 + AluJb SINE Alu 1 311 -1 2623 80 42 13 chr10 22580875 22581261 -123008027 + L1PA15 LINE L1 5768 6164 -1 1704 130 0 20 chr10 22581926 22582180 -123007108 - AluSx SINE Alu -6 306 58 300 135 38 38 chr10 22582505 22582652 -123006636 + GA-rich Low_complexity Low_complexity 1 147 0 28 48 0 0 chr10 22582673 22582715 -123006573 + AT_rich Low_complexity Low_complexity 1 42 0 1168 124 20 50 chr10 22582801 22583003 -123006285 - AluSg/x SINE Alu -15 295 100 902 159 0 0 chr10 22583128 22583266 -123006022 + AluJb SINE Alu 166 303 -9 2307 113 0 3 chr10 22583317 22583626 -123005662 - AluSx SINE Alu -4 308 1 280 281 12 0 chr10 22583630 22583712 -123005576 + MIR SINE MIR 102 184 -78 362 207 0 35 chr10 22583938 22584025 -123005263 - FLAM SINE Alu -1 132 49 1687 168 3 13 chr10 22584275 22584573 -123004715 + AluJo SINE Alu 1 295 -17 402 240 20 60 chr10 22584817 22584967 -123004321 - MIR3 SINE MIR -30 178 35 982 216 19 9 chr10 22585169 22585382 -123003906 - MER58B DNA MER1_type 0 341 127 811 153 42 58 chr10 22585392 22585581 -123003707 - AluJo SINE Alu 0 312 127 484 232 30 0 chr10 22585581 22585601 -123003687 - MER58B DNA MER1_type -239 102 84 1953 135 34 3 chr10 22585601 22585897 -123003391 + AluSx SINE Alu 1 305 -7 484 232 30 0 chr10 22585897 22585975 -123003313 - MER58B DNA MER1_type -257 84 1 2073 114 32 23 chr10 22586723 22587031 -123002257 - AluSx SINE Alu -1 311 1 697 195 0 0 chr10 22587454 22587577 -123001711 - FLAM_A SINE Alu -10 123 1 200 200 0 0 chr10 22587579 22587614 -123001674 + T-rich Low_complexity Low_complexity 2 36 0 1702 203 27 25 chr10 22587620 22588025 -123001263 - L1MC1 LINE L1 -6 6327 5922 4045 91 0 30 chr10 22588778 22588959 -123000329 + MER41A LTR ERV1 1 186 -368 2340 83 0 35 chr10 22588959 22589272 -123000016 + AluSx SINE Alu 1 302 -10 4045 91 0 30 chr10 22589272 22589660 -122999628 + MER41A LTR ERV1 186 553 -1 968 180 172 27 chr10 22589661 22589922 -122999366 - MER46C DNA MER2_type -28 310 12 1982 127 0 37 chr10 22590032 22590356 -122998932 + AluSx SINE Alu 1 312 0 859 200 19 0 chr10 22591037 22591192 -122998096 + FRAM SINE Alu 4 161 -15 610 133 10 10 chr10 22591344 22591442 -122997846 + MER4A LTR ERV1 1 98 -566 1657 146 25 55 chr10 22591443 22591798 -122997490 + MER4A LTR ERV1 262 664 0 2247 82 0 23 chr10 22592667 22592970 -122996318 + AluY SINE Alu 1 296 -15 1751 187 0 0 chr10 22593373 22593662 -122995626 + AluSx SINE Alu 3 291 -21 281 183 0 70 chr10 22593674 22593745 -122995543 + L1MC5 LINE L1 5381 5446 -2362 566 220 98 53 chr10 22593761 22594025 -122995263 + L1MC5 LINE L1 7317 7592 -369 454 263 89 17 chr10 22594071 22594250 -122995038 + MIR SINE MIR 70 261 -1 2128 129 0 0 chr10 22594305 22594599 -122994689 + AluSg SINE Alu 1 294 -16 2016 138 0 0 chr10 22594599 22594888 -122994400 + AluSg1 SINE Alu 1 290 -19 294 143 0 0 chr10 22594993 22595042 -122994246 + (TA)n Simple_repeat Simple_repeat 1 49 0 2215 106 0 3 chr10 22595046 22595338 -122993950 - AluSg1 SINE Alu -18 291 1 556 274 44 0 chr10 22596049 22596184 -122993104 + MER58B DNA MER1_type 200 340 -1 3735 142 87 22 chr10 22596460 22597199 -122992089 + LTR48 LTR ERV1 1 787 0 2302 120 0 0 chr10 22597415 22597723 -122991565 + AluSx SINE Alu 1 308 -4 2164 96 33 7 chr10 22597824 22598126 -122991162 + AluSg SINE Alu 1 310 0 315 113 0 0 chr10 22599686 22599739 -122989549 + (T)n Simple_repeat Simple_repeat 1 53 0 2152 102 0 0 chr10 22601270 22601544 -122987744 - AluSx SINE Alu -18 294 21 1595 134 5 0 chr10 22602221 22602444 -122986844 + AluSx SINE Alu 1 224 -88 884 141 0 0 chr10 22602444 22602565 -122986723 + AluSp SINE Alu 132 252 -61 1559 192 7 20 chr10 22602852 22603016 -122986272 - AluJo SINE Alu -14 298 138 1966 118 0 14 chr10 22603016 22603295 -122985993 - AluSx SINE Alu -15 297 23 1559 192 7 20 chr10 22603295 22603432 -122985856 - AluJo SINE Alu -174 138 1 22 0 0 0 chr10 22603789 22603811 -122985477 + AT_rich Low_complexity Low_complexity 1 22 0 561 177 11 33 chr10 22604144 22604325 -122984963 + GA-rich Low_complexity Low_complexity 2 178 0 258 269 68 19 chr10 22604331 22604490 -122984798 + MIR SINE MIR 95 262 0 232 228 123 0 chr10 22604940 22604997 -122984291 - MLT1K LTR MaLR -23 565 502 1892 145 28 3 chr10 22605155 22605444 -122983844 + AluJo SINE Alu 1 296 -16 237 261 216 11 chr10 22605833 22605921 -122983367 - L2 LINE L2 -19 3253 3148 255 61 0 0 chr10 22605953 22605986 -122983302 + (GGGGA)n Simple_repeat Simple_repeat 5 37 0 261 286 14 0 chr10 22606199 22606269 -122983019 - L2 LINE L2 -519 2795 2725 2235 84 11 0 chr10 22606295 22606580 -122982708 - AluSq SINE Alu -25 288 1 760 191 0 0 chr10 22607167 22607298 -122981990 - FLAM_A SINE Alu -2 131 1 2017 131 10 7 chr10 22607560 22607858 -122981430 - AluJb SINE Alu -13 299 1 2497 70 0 16 chr10 22608246 22608560 -122980728 + AluY SINE Alu 1 309 -2 1630 173 14 14 chr10 22608684 22608973 -122980315 + AluJo SINE Alu 1 289 -23 2445 79 3 3 chr10 22609125 22609428 -122979860 + AluSp SINE Alu 1 303 -10 2284 123 0 0 chr10 22609675 22609977 -122979311 + AluSx SINE Alu 3 304 -8 2311 102 0 0 chr10 22610143 22610438 -122978850 + AluSx SINE Alu 1 295 -17 730 179 0 8 chr10 22610981 22611115 -122978173 + FLAM_C SINE Alu 1 133 0 487 266 6 19 chr10 22611263 22611421 -122977867 + MIR SINE MIR 74 229 -33 2646 68 0 0 chr10 22611507 22611818 -122977470 - AluY SINE Alu 0 311 1 1083 36 42 12 chr10 22611818 22611986 -122977302 + (TTTC)n Simple_repeat Simple_repeat 2 174 0 886 185 0 0 chr10 22611990 22612125 -122977163 - AluJo SINE Alu -37 275 141 611 188 0 0 chr10 22612125 22612226 -122977062 - AluJo SINE Alu -207 105 5 223 265 0 29 chr10 22612390 22612458 -122976830 + (TATG)n Simple_repeat Simple_repeat 4 69 0 2019 132 7 0 chr10 22612612 22612908 -122976380 - AluJo SINE Alu -14 298 1 50 31 0 0 chr10 22613009 22613073 -122976215 + AT_rich Low_complexity Low_complexity 1 64 0 2417 96 0 0 chr10 22613206 22613507 -122975781 + AluSc SINE Alu 1 301 -8 2420 80 0 10 chr10 22613507 22613809 -122975479 + AluSq SINE Alu 1 299 -14 460 224 42 55 chr10 22613950 22614115 -122975173 - MER31B LTR ERV1 -287 179 17 1005 208 95 0 chr10 22614308 22614539 -122974749 + L1PB4 LINE L1 5892 6144 -12 1209 118 0 0 chr10 22614540 22614701 -122974587 - AluSp SINE Alu -16 297 137 189 0 0 0 chr10 22615073 22615094 -122974194 + (A)n Simple_repeat Simple_repeat 1 21 0 1421 218 119 13 chr10 22615564 22615949 -122973339 + MER31B LTR ERV1 1 426 -40 2143 117 7 7 chr10 22615950 22616250 -122973038 + AluSx SINE Alu 1 300 -12 2369 96 0 6 chr10 22616256 22616570 -122972718 + AluSx SINE Alu 1 312 0 406 255 38 0 chr10 22616617 22616723 -122972565 + MARNA DNA Mariner 266 375 -211 1178 111 29 0 chr10 22616764 22616936 -122972352 + AluSg/x SINE Alu 123 299 -13 235 253 192 20 chr10 22616963 22617062 -122972226 - MARNA DNA Mariner -396 190 75 1540 130 3 144 chr10 22617210 22617390 -122971898 - AluJo SINE Alu -8 304 100 207 0 0 0 chr10 22617390 22617413 -122971875 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2048 125 0 7 chr10 22617413 22617700 -122971588 - AluSx SINE Alu -27 285 1 1540 130 3 144 chr10 22617700 22617872 -122971416 - AluJo SINE Alu -210 102 1 902 139 74 55 chr10 22618144 22618254 -122971034 - L1MA4A LINE L1 -2 6301 6184 2365 118 0 0 chr10 22618254 22618559 -122970729 - AluSx SINE Alu -7 305 1 902 139 74 55 chr10 22618559 22618650 -122970638 - L1MA4A LINE L1 -119 6184 6096 398 156 26 0 chr10 22619132 22619209 -122970079 + AluSp/q SINE Alu 225 303 0 553 131 19 0 chr10 22619211 22619318 -122969970 - L1MA4A LINE L1 -231 6072 5964 2247 65 43 0 chr10 22619663 22619941 -122969347 - AluY SINE Alu -20 291 2 1040 147 147 0 chr10 22619965 22620142 -122969146 - AluJo SINE Alu -26 286 84 887 319 65 18 chr10 22620457 22620906 -122968382 + L3b LINE CR1 1111 1580 -3 283 268 124 0 chr10 22621818 22621915 -122967373 + L2 LINE L2 3189 3297 -16 1587 158 40 0 chr10 22621944 22622197 -122967091 - AluJo SINE Alu -49 263 1 2364 164 56 92 chr10 22622902 22623233 -122966055 - L1PB4 LINE L1 -17 6139 5837 2492 41 3 7 chr10 22623233 22623524 -122965764 - AluY SINE Alu -12 299 10 2364 164 56 92 chr10 22623524 22623782 -122965506 - L1PB4 LINE L1 -319 5837 5571 2214 100 10 7 chr10 22623792 22624092 -122965196 - AluSx SINE Alu -11 301 1 2260 115 0 0 chr10 22624092 22624396 -122964892 - AluSx SINE Alu -8 304 1 180 321 84 46 chr10 22624402 22624533 -122964755 + MER5B DNA MER1_type 41 176 -2 1505 146 84 18 chr10 22625431 22625705 -122963583 - AluJo SINE Alu -17 295 4 334 239 10 166 chr10 22626130 22626192 -122963096 - MER5B DNA MER1_type -5 173 103 2537 49 3 7 chr10 22626192 22626500 -122962788 + AluY SINE Alu 1 307 -4 334 239 10 166 chr10 22626500 22626583 -122962705 - MER5B DNA MER1_type -75 103 9 2311 115 3 0 chr10 22626583 22626888 -122962400 + AluSx SINE Alu 1 306 -6 334 239 10 166 chr10 22626888 22626899 -122962389 - MER5B DNA MER1_type -169 9 52 2236 104 7 0 chr10 22626899 22627196 -122962092 + AluSq SINE Alu 5 303 -10 334 239 10 166 chr10 22627196 22627242 -122962046 - MER5B DNA MER1_type -125 53 1 2156 105 3 0 chr10 22627285 22627570 -122961718 + AluSx SINE Alu 23 308 -4 1663 155 19 11 chr10 22627681 22627786 -122961502 + AluJb SINE Alu 30 133 -179 2197 126 3 0 chr10 22627786 22628088 -122961200 + AluSx SINE Alu 1 303 -9 1663 155 19 11 chr10 22628088 22628253 -122961035 + AluJb SINE Alu 133 302 -10 978 19 0 0 chr10 22628370 22628477 -122960811 + U6 snRNA snRNA 1 107 0 7992 12 0 0 chr10 22628479 22629687 -122959601 + L1PA2 LINE L1 4967 6155 0 702 172 78 0 chr10 22630506 22630634 -122958654 - AluJo SINE Alu -169 143 6 225 94 0 0 chr10 22630638 22630670 -122958618 + (T)n Simple_repeat Simple_repeat 1 32 0 483 171 0 0 chr10 22630697 22630773 -122958515 + AluJ/FRAM SINE Alu 217 292 -20 1931 116 11 14 chr10 22630930 22631215 -122958073 - AluSx SINE Alu -2 310 27 654 199 7 37 chr10 22631275 22631411 -122957877 + FLAM_A SINE Alu 11 142 0 2221 57 0 4 chr10 22631617 22631942 -122957346 - AluY SINE Alu 0 344 21 26 30 0 0 chr10 22631947 22631980 -122957308 + AT_rich Low_complexity Low_complexity 1 33 0 1858 175 3 0 chr10 22631987 22632279 -122957009 + AluJb SINE Alu 1 293 -19 533 117 65 5 chr10 22632312 22632932 -122956356 + (TA)n Simple_repeat Simple_repeat 1 657 0 385 126 55 12 chr10 22633251 22633512 -122955776 + (TA)n Simple_repeat Simple_repeat 1 272 0 267 139 72 0 chr10 22633524 22633690 -122955598 + (TA)n Simple_repeat Simple_repeat 2 179 0 1724 186 0 7 chr10 22633844 22634145 -122955143 + AluJo SINE Alu 1 299 -13 2320 101 13 0 chr10 22634944 22635124 -122954164 - AluSx SINE Alu -1 311 124 225 0 0 0 chr10 22635124 22635149 -122954139 + (TG)n Simple_repeat Simple_repeat 2 26 0 2320 101 13 0 chr10 22635149 22635275 -122954013 - AluSx SINE Alu -188 124 1 3757 143 19 36 chr10 22635336 22635616 -122953672 - L1MB3 LINE L1 -71 6112 5829 2315 98 13 0 chr10 22635616 22635923 -122953365 - AluSp SINE Alu -2 311 1 3757 143 19 36 chr10 22635923 22636332 -122952956 - L1MB3 LINE L1 -354 5829 5435 404 143 0 0 chr10 22636338 22636401 -122952887 - Alu SINE Alu -16 296 234 2313 87 7 0 chr10 22636442 22636728 -122952560 - AluSx SINE Alu -19 293 6 269 143 0 0 chr10 22636735 22636777 -122952511 - L1MB3 LINE L1 -744 5439 5398 1986 145 3 35 chr10 22637111 22637429 -122951859 + AluJo SINE Alu 1 308 -4 2280 116 0 0 chr10 22637885 22638187 -122951101 - AluSg SINE Alu -8 302 1 296 83 0 21 chr10 22638192 22638240 -122951048 + MADE1 DNA Mariner 34 80 0 1213 195 17 47 chr10 22638438 22638736 -122950552 - AluJo SINE Alu -13 289 1 220 276 51 31 chr10 22639159 22639257 -122950031 + MIR SINE MIR 27 126 -136 183 114 0 0 chr10 22639257 22639292 -122949996 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 2471 74 3 3 chr10 22639470 22639769 -122949519 + AluSp SINE Alu 1 299 -14 1654 257 124 17 chr10 22640188 22640243 -122949045 - L1MB3 LINE L1 -891 5255 5207 1977 147 23 0 chr10 22640243 22640542 -122948746 - AluJo SINE Alu -6 306 1 1654 257 124 17 chr10 22640542 22641140 -122948148 - L1MB3 LINE L1 -939 5207 4532 261 155 138 0 chr10 22641180 22641238 -122948050 - L1MB3 LINE L1 -1600 4546 4481 995 147 0 0 chr10 22641249 22641399 -122947889 - AluJb SINE Alu -3 309 160 2403 75 3 13 chr10 22641399 22641707 -122947581 - HERVL LTR ERVL -2165 3489 3185 2403 202 60 21 chr10 22641707 22641757 -122947531 - MLT1F1 LTR MaLR -12 555 508 1704 154 95 0 chr10 22641757 22642042 -122947246 - AluJb SINE Alu 0 312 1 2294 123 3 0 chr10 22642045 22642354 -122946934 - AluSq SINE Alu -3 310 1 2403 202 60 21 chr10 22642354 22642833 -122946455 - MLT1F1 LTR MaLR -60 507 1 21 36 0 0 chr10 22643071 22643099 -122946189 + AT_rich Low_complexity Low_complexity 1 28 0 1805 143 0 0 chr10 22643365 22643630 -122945658 - AluSx SINE Alu -15 297 33 2294 91 0 7 chr10 22644037 22644333 -122944955 - AluSg1 SINE Alu -15 294 1 195 306 0 0 chr10 22644334 22644419 -122944869 + T-rich Low_complexity Low_complexity 1 85 0 * 704 86 9 0 chr10 22644399 22644504 -122944784 + (TTCC)n Simple_repeat Simple_repeat 4 109 0 1764 192 13 0 chr10 22644520 22644828 -122944460 - AluJo SINE Alu 0 312 1 1258 123 0 0 chr10 22644840 22645019 -122944269 - AluY SINE Alu -14 297 119 1218 151 5 0 chr10 22645124 22645323 -122943965 + AluSg/x SINE Alu 110 309 -1 180 277 31 31 chr10 22645416 22645481 -122943807 - MIR3 SINE MIR -31 177 113 1021 231 58 0 chr10 22645756 22646033 -122943255 - MER5C DNA MER1_type -2 322 30 270 308 56 0 chr10 22646592 22646699 -122942589 + MIR SINE MIR 89 201 -61 494 339 41 14 chr10 22646848 22647066 -122942222 + MLT1K LTR MaLR 23 246 -342 1726 151 3 56 chr10 22647558 22647707 -122941581 + AluJb SINE Alu 1 127 -185 2181 127 3 0 chr10 22647707 22648006 -122941282 + AluSq SINE Alu 1 300 -13 1726 151 3 56 chr10 22648006 22648161 -122941127 + AluJb SINE Alu 127 289 -23 2307 103 3 3 chr10 22648453 22648755 -122940533 + AluSq SINE Alu 1 302 -11 455 189 26 120 chr10 22648777 22648968 -122940320 - L1MC5 LINE L1 -60 7901 7729 2208 99 14 0 chr10 22648969 22649287 -122940001 - AluSp SINE Alu 0 324 3 1677 199 3 3 chr10 22649287 22649589 -122939699 - AluJo SINE Alu -10 302 1 32 0 0 0 chr10 22649595 22649627 -122939661 + AT_rich Low_complexity Low_complexity 1 32 0 2414 69 0 0 chr10 22649627 22649916 -122939372 - AluY SINE Alu -22 289 1 2165 114 0 0 chr10 22649927 22650216 -122939072 - AluSq SINE Alu -24 289 1 1065 244 31 39 chr10 22650232 22650646 -122938642 - L1MC5 LINE L1 -240 7721 7311 293 287 69 0 chr10 22651918 22652019 -122937269 + L2 LINE L2 3149 3256 -16 921 206 57 0 chr10 22652316 22652510 -122936778 - MLT1D LTR MaLR 0 505 301 1906 162 3 3 chr10 22652580 22652883 -122936405 + AluSp SINE Alu 1 303 -10 1707 162 19 26 chr10 22652919 22653228 -122936060 + AluJo SINE Alu 1 307 -5 497 273 37 51 chr10 22653305 22653521 -122935767 + MLT1J LTR MaLR 64 276 -235 1144 120 0 0 chr10 22653670 22653851 -122935437 - AluJo/FRAM SINE Alu 0 314 134 2231 116 3 0 chr10 22653851 22654154 -122935134 - AluSq SINE Alu -9 304 1 2069 140 59 6 chr10 22654197 22654553 -122934735 + THE1C LTR MaLR 1 375 0 2023 149 3 0 chr10 22654700 22654996 -122934292 - AluSx SINE Alu -15 297 1 1067 143 0 7 chr10 22655375 22655702 -122933586 + AluSx SINE Alu 1 326 0 666 296 33 25 chr10 22656334 22656574 -122932714 - MIR SINE MIR -20 242 1 1032 126 23 11 chr10 22656599 22656773 -122932515 + AluSg/x SINE Alu 120 295 -17 2051 109 3 0 chr10 22656785 22657099 -122932189 + AluSg SINE Alu 1 310 0 803 156 54 0 chr10 22657111 22657278 -122932010 - L1MA8 LINE L1 -12 6279 6104 983 97 6 68 chr10 22657286 22657462 -122931826 + FAM SINE Alu 1 48 -1 295 68 23 0 chr10 22657467 22657522 -122931766 - L1MA8 LINE L1 -189 6102 6044 313 248 201 7 chr10 22657544 22657693 -122931595 - MER104 DNA Tc2 -1 179 2 1531 189 0 16 chr10 22658470 22658782 -122930506 - AluJo SINE Alu -5 307 1 1795 102 8 4 chr10 22658917 22659173 -122930115 - AluSc SINE Alu -12 297 41 396 133 2 0 chr10 22659173 22659244 -122930044 - AluJo/FLAM SINE Alu -169 133 71 456 350 13 27 chr10 22659278 22659578 -122929710 + L2 LINE L2 1985 2280 -1034 237 347 24 29 chr10 22659844 22660014 -122929274 + L2 LINE L2 2737 2905 -409 2135 120 3 0 chr10 22660018 22660350 -122928938 - AluSx SINE Alu 0 312 1 704 186 0 23 chr10 22660797 22660926 -122928362 - FLAM_A SINE Alu -7 126 1 1379 175 35 14 chr10 22661043 22661328 -122927960 + AluJo SINE Alu 1 291 -21 26 0 0 0 chr10 22661341 22661367 -122927921 + AT_rich Low_complexity Low_complexity 1 26 0 257 149 21 0 chr10 22661367 22661414 -122927874 - MLT1B LTR MaLR -342 48 1 1889 146 0 0 chr10 22661497 22661823 -122927465 - AluSx SINE Alu 0 328 3 186 162 0 54 chr10 22662285 22662322 -122926966 + MIR SINE MIR 220 254 -8 712 224 81 6 chr10 22662412 22662586 -122926702 + MIR SINE MIR 3 189 -73 2065 123 12 110 chr10 22662618 22662774 -122926514 + MLT1B LTR MaLR 1 171 -219 2027 119 10 10 chr10 22662774 22663086 -122926202 + AluSx SINE Alu 1 312 0 2065 123 12 110 chr10 22663086 22663358 -122925930 + MLT1B LTR MaLR 171 387 -3 4559 72 14 7 chr10 22663413 22664434 -122924854 - MER11A LTR ERVK 0 1266 1 2086 125 0 0 chr10 22664525 22664820 -122924468 - AluSg SINE Alu -15 295 1 24 32 0 0 chr10 22666019 22666050 -122923238 + AT_rich Low_complexity Low_complexity 1 31 0 1893 137 3 10 chr10 22666258 22666557 -122922731 - AluSx SINE Alu -15 297 1 2098 155 64 50 chr10 22666764 22667108 -122922180 + MSTB LTR MaLR 1 354 -72 2057 119 3 0 chr10 22667108 22667411 -122921877 + AluSx SINE Alu 1 304 -8 2098 155 64 50 chr10 22667411 22667486 -122921802 + MSTB LTR MaLR 354 426 0 567 280 88 53 chr10 22667520 22667964 -122921324 + MLT1J1 LTR MaLR 3 437 -9 935 180 0 116 chr10 22668347 22668580 -122920708 + AluJo SINE Alu 1 206 -106 270 0 0 0 chr10 22668758 22668788 -122920500 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 1968 118 0 4 chr10 22668788 22669068 -122920220 - AluSx SINE Alu -33 279 1 22 41 0 55 chr10 22669217 22669238 -122920050 + AT_rich Low_complexity Low_complexity 1 22 -47 1829 88 0 8 chr10 22669238 22669487 -122919801 - AluSg SINE Alu -26 284 38 22 41 0 55 chr10 22669487 22669504 -122919784 + AT_rich Low_complexity Low_complexity 22 38 -31 949 173 0 24 chr10 22669504 22669672 -122919616 - FAM SINE Alu -11 164 1 22 41 0 55 chr10 22669672 22669705 -122919583 + AT_rich Low_complexity Low_complexity 38 69 0 302 275 60 54 chr10 22669928 22670095 -122919193 - L1MC5 LINE L1 -425 7536 7369 2266 84 3 0 chr10 22670394 22670692 -122918596 - AluSp SINE Alu -14 299 1 776 136 0 8 chr10 22671443 22671561 -122917727 - FRAM SINE Alu -8 168 52 586 188 29 12 chr10 22671598 22671768 -122917520 + CT-rich Low_complexity Low_complexity 1 173 0 240 35 0 0 chr10 22671769 22671798 -122917490 + (TCCC)n Simple_repeat Simple_repeat 3 31 0 530 159 0 167 chr10 22671800 22672106 -122917182 - FLAM_C SINE Alu 0 284 2 1252 227 88 34 chr10 22672321 22672733 -122916555 + MLT1C LTR MaLR 17 451 -16 1625 138 96 0 chr10 22672832 22673092 -122916196 - AluSx SINE Alu -27 285 1 1814 163 0 3 chr10 22673094 22673400 -122915888 - AluJo SINE Alu -7 305 1 2291 78 0 0 chr10 22673413 22673708 -122915580 - AluY SINE Alu -16 295 1 2011 142 0 0 chr10 22673812 22674123 -122915165 - AluSq SINE Alu -2 311 1 1737 173 0 0 chr10 22674489 22674772 -122914516 + AluJo SINE Alu 7 289 -23 26 30 0 0 chr10 22674773 22674806 -122914482 + AT_rich Low_complexity Low_complexity 1 33 0 653 296 84 50 chr10 22674856 22675238 -122914050 + MLT1J2 LTR MaLR 45 439 -11 1833 168 7 3 chr10 22675923 22676232 -122913056 + AluJb SINE Alu 1 310 -2 496 288 19 19 chr10 22676408 22676551 -122912737 - MIR SINE MIR -3 259 114 2324 70 0 7 chr10 22676551 22676851 -122912437 + AluSq SINE Alu 1 298 -15 496 288 19 19 chr10 22676851 22676867 -122912421 - MIR SINE MIR -147 115 100 22 0 0 0 chr10 22676867 22676889 -122912399 + AT_rich Low_complexity Low_complexity 1 22 0 1482 180 63 0 chr10 22676902 22677186 -122912102 + AluJb SINE Alu 4 305 -7 304 271 0 0 chr10 22677216 22677286 -122912002 - MIR SINE MIR -141 121 52 1046 152 0 12 chr10 22677395 22677560 -122911728 + FRAM SINE Alu 4 166 0 472 286 76 12 chr10 22677661 22677832 -122911456 + MIR SINE MIR 80 261 -1 2855 102 7 5 chr10 22678219 22678632 -122910656 + L1PA13 LINE L1 5750 6163 0 1128 189 99 0 chr10 22679473 22679706 -122909582 + AluJb SINE Alu 49 304 -8 2008 120 0 16 chr10 22679708 22680016 -122909272 + AluSq SINE Alu 1 303 -10 279 0 0 0 chr10 22680110 22680141 -122909147 + (T)n Simple_repeat Simple_repeat 1 31 0 372 266 9 126 chr10 22680701 22680784 -122908504 + MER5A DNA MER1_type 1 92 -97 2281 84 3 0 chr10 22680784 22681082 -122908206 + AluSp SINE Alu 1 299 -14 372 266 9 126 chr10 22681082 22681212 -122908076 + MER5A DNA MER1_type 92 189 0 1083 168 0 24 chr10 22681370 22681578 -122907710 - AluSx SINE Alu -12 298 96 844 119 0 0 chr10 22681680 22681798 -122907490 - AluSx SINE Alu -195 118 1 1612 101 0 0 chr10 22681900 22682119 -122907169 + AluSg/x SINE Alu 83 301 -9 371 123 15 0 chr10 22682221 22682286 -122907002 - L1MA9 LINE L1 -3 6309 6244 1441 155 44 44 chr10 22682287 22682584 -122906704 - AluJo SINE Alu -11 301 5 788 158 30 8 chr10 22682586 22682719 -122906569 - AluJo SINE Alu -175 137 2 2143 117 0 0 chr10 22682894 22683201 -122906087 - AluSg SINE Alu -3 307 1 2169 92 0 7 chr10 22683434 22683737 -122905551 - AluSp SINE Alu -12 301 1 1932 129 3 19 chr10 22683880 22684189 -122905099 + AluSx SINE Alu 2 305 -7 2191 95 0 25 chr10 22684230 22684547 -122904741 - AluSx SINE Alu -3 309 1 413 230 105 63 chr10 22684864 22685055 -122904233 + MER34 LTR ERV1 344 542 0 973 172 10 5 chr10 22685177 22685369 -122903919 + AluJo SINE Alu 120 312 0 433 297 36 0 chr10 22685392 22685503 -122903785 + MIR SINE MIR 90 204 -58 2153 98 0 14 chr10 22685503 22685800 -122903488 + AluSx SINE Alu 1 293 -19 280 250 200 8 chr10 22685802 22685922 -122903366 + L2 LINE L2 3171 3313 0 1958 126 3 3 chr10 22686006 22686308 -122902980 - AluJb SINE Alu -10 302 1 1380 212 64 91 chr10 22687545 22688073 -122901215 - LTR9 LTR ERV1 -15 597 84 2069 119 0 7 chr10 22688073 22688368 -122900920 - AluSx SINE Alu -19 293 1 1476 108 0 14 chr10 22688396 22688610 -122900678 - MER4B LTR ERV1 -398 212 2 2876 130 21 9 chr10 22688610 22688943 -122900345 - MER39 LTR ERV1 -263 444 103 3138 191 43 16 chr10 22688943 22689549 -122899739 + LTR26E LTR ERV1 1 622 0 2876 130 21 9 chr10 22689549 22689652 -122899636 - MER39 LTR ERV1 -604 103 3 26 0 0 27 chr10 22690109 22690121 -122899167 + AT_rich Low_complexity Low_complexity 1 12 -24 2140 103 10 0 chr10 22690121 22690413 -122898875 - AluSx SINE Alu -17 295 1 26 0 0 27 chr10 22690413 22690437 -122898851 + AT_rich Low_complexity Low_complexity 12 36 0 858 153 15 0 chr10 22690464 22690595 -122898693 - FLAM_C SINE Alu 0 133 1 1597 151 8 11 chr10 22690652 22690917 -122898371 + AluSx SINE Alu 32 295 -17 1412 214 62 60 chr10 22690989 22691157 -122898131 - MER39 LTR ERV1 -1 706 540 2348 81 0 0 chr10 22691157 22691454 -122897834 - AluSg SINE Alu -13 297 1 1412 214 62 60 chr10 22691454 22691779 -122897509 - MER39 LTR ERV1 -167 540 1 2302 72 0 16 chr10 22692239 22692545 -122896743 + AluSp SINE Alu 1 301 -12 1764 114 53 0 chr10 22692735 22692998 -122896290 + AluSq SINE Alu 23 299 -14 2249 87 6 6 chr10 22693235 22693547 -122895741 + AluSp SINE Alu 1 312 -1 1381 198 39 58 chr10 22693760 22693847 -122895441 + MER4D LTR ERV1 548 635 -268 1824 153 0 6 chr10 22693847 22694160 -122895128 + AluJb SINE Alu 1 311 -1 1381 198 39 58 chr10 22694160 22694435 -122894853 + MER4D LTR ERV1 635 903 0 1156 162 83 42 chr10 22694457 22694485 -122894803 + LTR8 LTR ERV1 14 39 -652 2499 62 0 0 chr10 22694485 22694793 -122894495 + AluY SINE Alu 1 308 -3 1156 162 83 42 chr10 22694793 22695033 -122894255 + LTR8 LTR ERV1 39 276 -415 315 0 0 0 chr10 22696052 22696087 -122893201 + (A)n Simple_repeat Simple_repeat 1 35 0 1580 205 42 46 chr10 22696097 22696537 -122892751 + LTR8 LTR ERV1 293 727 0 2144 73 0 3 chr10 22696587 22696873 -122892415 - AluY SINE Alu -3 308 24 1653 138 29 11 chr10 22697042 22697180 -122892108 + AluSg SINE Alu 3 137 -173 2067 104 0 16 chr10 22697180 22697489 -122891799 + AluSg SINE Alu 1 304 -6 1653 138 29 11 chr10 22697489 22697626 -122891662 + AluSg SINE Alu 137 283 -27 965 211 146 39 chr10 22697698 22697978 -122891310 + HsTC2 DNA Tc2 1 310 -1588 712 215 43 5 chr10 22697984 22698170 -122891118 + HsTC2 DNA Tc2 1706 1898 0 387 292 88 15 chr10 22698603 22698740 -122890548 - L2 LINE L2 -1 3271 3125 1408 186 23 107 chr10 22698767 22699160 -122890128 - MLT1A1 LTR MaLR -5 360 1 576 208 21 21 chr10 22699235 22699379 -122889909 - LTR33 LTR ERVL -4 517 374 1604 189 0 19 chr10 22699532 22699849 -122889439 - AluJo SINE Alu 0 312 2 492 265 149 60 chr10 22699965 22700171 -122889117 + MLT1J LTR MaLR 8 251 -260 1548 186 25 3 chr10 22700171 22700456 -122888832 - AluJo SINE Alu -21 291 1 492 265 149 60 chr10 22700456 22700551 -122888737 + MLT1J LTR MaLR 251 336 -175 269 146 49 61 chr10 22700581 22700663 -122888625 + MLT1J1 LTR MaLR 366 446 0 457 128 186 0 chr10 22700829 22700931 -122888357 + FLAM_A SINE Alu 22 142 0 321 310 62 7 chr10 22701197 22701342 -122887946 + MIR SINE MIR 76 228 -34 2096 117 3 0 chr10 22701743 22702043 -122887245 + AluSp SINE Alu 1 301 -12 1648 171 0 10 chr10 22702104 22702396 -122886892 - AluJo SINE Alu -23 289 1 729 169 32 32 chr10 22702396 22702535 -122886753 + MER57A LTR ERV1 246 387 -16 1579 174 33 10 chr10 22702535 22702840 -122886448 - AluJb SINE Alu 0 312 1 729 169 32 32 chr10 22702840 22702854 -122886434 + MER57A LTR ERV1 386 399 -4 1431 235 91 52 chr10 22702892 22703377 -122885911 + MLT1H LTR MaLR 46 549 0 4751 144 66 4 chr10 22703462 22704240 -122885048 + LTR1B LTR ERV1 1 826 0 359 176 49 92 chr10 22705103 22705214 -122884074 - L1ME4a LINE L1 -38 6083 5978 1664 167 24 0 chr10 22705214 22705501 -122883787 - AluJo SINE Alu -18 294 1 359 176 49 92 chr10 22705501 22705531 -122883757 - L1ME4a LINE L1 -143 5978 5948 2180 99 38 0 chr10 22705816 22706108 -122883180 + AluSx SINE Alu 1 303 -9 32 67 0 0 chr10 22706765 22706825 -122882463 + AT_rich Low_complexity Low_complexity 1 60 0 765 167 8 8 chr10 22706955 22707087 -122882201 + FLAM_C SINE Alu 1 132 -1 445 286 40 107 chr10 22707317 22707434 -122881854 + MIR SINE MIR 10 133 -129 1035 103 0 27 chr10 22707434 22707619 -122881669 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 1356 158 150 4 chr10 22707619 22707866 -122881422 - AluJo SINE Alu -19 283 1 445 286 40 107 chr10 22707866 22707999 -122881289 + MIR SINE MIR 131 244 -18 241 95 0 0 chr10 22708033 22708075 -122881213 - Alu SINE Alu 0 300 259 690 79 30 0 chr10 22708075 22708176 -122881112 + AluSp/q SINE Alu 205 308 -5 215 288 0 0 chr10 22708462 22708521 -122880767 + MIR SINE MIR 74 132 -130 28 48 0 0 chr10 22708894 22708936 -122880352 + AT_rich Low_complexity Low_complexity 1 42 0 1886 155 7 7 chr10 22709637 22709940 -122879348 + AluJb SINE Alu 1 303 -9 874 291 83 32 chr10 22709949 22710323 -122878965 + MER34 LTR ERV1 1 393 -149 1061 146 0 11 chr10 22710323 22710501 -122878787 - AluSg/x SINE Alu 0 310 135 315 143 0 0 chr10 22710502 22710551 -122878737 + MER39 LTR ERV1 555 603 -104 1435 149 9 9 chr10 22710553 22710775 -122878513 + AluSc SINE Alu 2 223 -86 919 131 0 0 chr10 22710992 22711122 -122878166 - AluSg/x SINE Alu -26 286 157 508 133 95 139 chr10 22711143 22711194 -122878094 + MER39 LTR ERV1 555 607 -100 1995 132 0 4 chr10 22711194 22711500 -122877788 + AluY SINE Alu 2 306 0 508 133 95 139 chr10 22711500 22711603 -122877685 + MER39 LTR ERV1 607 705 -2 2005 166 0 0 chr10 22711659 22711961 -122877327 - AluJo SINE Alu -10 302 1 2190 112 3 0 chr10 22711986 22712281 -122877007 - AluY SINE Alu -15 296 1 1835 157 31 3 chr10 22712283 22712576 -122876712 - AluJo SINE Alu -11 301 1 209 33 33 0 chr10 22713334 22713364 -122875924 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 1431 191 60 4 chr10 22713367 22713634 -122875654 - AluJb SINE Alu -30 282 1 2582 77 0 0 chr10 22714003 22714314 -122874974 + AluSx SINE Alu 1 311 -1 2396 94 0 0 chr10 22714487 22714794 -122874494 + AluSg SINE Alu 1 307 -3 2401 80 7 0 chr10 22714954 22715253 -122874035 - AluSq SINE Alu -12 301 1 1332 129 36 13 chr10 22715464 22715688 -122873600 + LTR39 LTR ERV1 1 229 -554 2162 123 3 0 chr10 22715688 22715990 -122873298 - AluSx SINE Alu -9 303 1 965 201 63 0 chr10 22715990 22716164 -122873124 + LTR39 LTR ERV1 599 783 0 2294 97 0 10 chr10 22716422 22716732 -122872556 + AluSx SINE Alu 1 307 -5 2122 139 0 3 chr10 22716800 22717101 -122872187 + AluSq SINE Alu 1 300 -13 32 26 0 0 chr10 22717116 22717155 -122872133 + AT_rich Low_complexity Low_complexity 1 39 0 2315 100 0 0 chr10 22718640 22718940 -122870348 + AluSc SINE Alu 1 300 -9 433 178 0 0 chr10 22719161 22719234 -122870054 - MLT1A1 LTR MaLR 0 365 293 2300 103 7 3 chr10 22719251 22719561 -122869727 - AluSx SINE Alu -1 311 1 1539 202 17 10 chr10 22719567 22719859 -122869429 - AluJb SINE Alu -18 294 1 1588 215 6 3 chr10 22719862 22720173 -122869115 - AluJo SINE Alu 0 312 1 1975 140 0 29 chr10 22720173 22720487 -122868801 - MLT1A1 LTR MaLR -60 305 1 1049 156 0 23 chr10 22720558 22720731 -122868557 + FRAM SINE Alu 1 168 -8 945 242 139 26 chr10 22720777 22721165 -122868123 - LTR16A LTR ERVL 0 450 19 208 303 90 41 chr10 22721639 22721761 -122867527 + L2 LINE L2 3133 3260 -12 1780 137 113 18 chr10 22721764 22722100 -122867188 + LTR29 LTR ERV1 1 303 -319 1615 246 43 66 chr10 22722100 22722725 -122866563 - LTR9 LTR ERV1 0 612 2 1780 137 113 18 chr10 22722725 22722927 -122866361 + LTR29 LTR ERV1 303 622 0 3778 134 8 31 chr10 22723037 22723353 -122865935 - MER4D LTR ERV1 -9 894 572 2144 87 50 4 chr10 22723353 22723630 -122865658 + AluSg SINE Alu 1 290 -20 3778 134 8 31 chr10 22723630 22723911 -122865377 - MER4D LTR ERV1 -331 572 309 2169 141 3 0 chr10 22723911 22724223 -122865065 + AluSq SINE Alu 1 313 0 3778 134 8 31 chr10 22724223 22724241 -122865047 - MER4D LTR ERV1 -594 309 292 496 265 123 12 chr10 22724248 22724410 -122864878 + LTR1 LTR ERV1 38 217 -568 598 189 32 41 chr10 22724468 22724651 -122864637 + LTR1B LTR ERV1 343 493 -333 268 213 27 153 chr10 22724660 22724810 -122864478 + LTR28 LTR ERV1 848 978 -42 2110 127 9 9 chr10 22724858 22725173 -122864115 - MER4D LTR ERV1 -557 315 1 1424 115 91 12 chr10 22725753 22726006 -122863282 + MER34C LTR ERV1 5 277 -308 1020 212 106 106 chr10 22726070 22726627 -122862661 - LTR1B LTR ERV1 -237 589 33 1671 151 45 10 chr10 22726700 22726992 -122862296 + MER34C LTR ERV1 252 553 -32 228 200 0 0 chr10 22726992 22727027 -122862261 + MER34C LTR ERV1 1 35 -550 * 656 177 130 95 chr10 22726996 22727265 -122862023 + MER39 LTR ERV1 5 263 -390 2370 95 13 0 chr10 22727265 22727569 -122861719 - AluSx SINE Alu -4 308 1 656 177 130 95 chr10 22727569 22727582 -122861706 + MER39 LTR ERV1 263 274 -379 2704 173 25 42 chr10 22727582 22727814 -122861474 + MER87 LTR ERV1 1 235 -306 2210 110 0 7 chr10 22727814 22728113 -122861175 + AluSp SINE Alu 1 297 -16 2704 173 25 42 chr10 22728113 22728287 -122861001 + MER87 LTR ERV1 235 398 -143 2156 128 3 0 chr10 22728287 22728584 -122860704 - AluSx SINE Alu -14 298 1 2704 173 25 42 chr10 22728584 22728726 -122860562 + MER87 LTR ERV1 398 541 0 656 177 130 95 chr10 22728726 22728742 -122860546 + MER39 LTR ERV1 274 461 -192 3759 169 49 24 chr10 22728742 22729489 -122859799 - LTR1B LTR ERV1 0 785 1 891 151 32 91 chr10 22729489 22729530 -122859758 + MER39 LTR ERV1 502 544 -163 1170 150 6 0 chr10 22729530 22729703 -122859585 + FAM SINE Alu 1 174 -1 891 151 32 91 chr10 22729703 22729771 -122859517 + MER39 LTR ERV1 544 614 -93 1868 118 89 4 chr10 22729771 22730042 -122859246 + AluSq SINE Alu 1 294 -19 891 151 32 91 chr10 22730042 22730150 -122859138 + MER39 LTR ERV1 614 707 0 2056 160 18 18 chr10 22730199 22730432 -122858856 - MER1B DNA MER1_type -2373 339 104 2097 122 34 71 chr10 22730432 22730810 -122858478 - THE1B LTR MaLR 0 364 1 2056 160 18 18 chr10 22730810 22730913 -122858375 - MER1B DNA MER1_type -2607 105 3 2118 138 0 19 chr10 22731480 22731798 -122857490 + AluSx SINE Alu 1 312 0 454 214 79 43 chr10 22732035 22732175 -122857113 - L1ME LINE L1 -616 5505 5361 924 142 25 19 chr10 22732618 22732780 -122856508 - Tigger7 DNA MER2_type 0 2487 2325 1923 95 3 79 chr10 22732798 22733103 -122856185 + AluSx SINE Alu 11 292 -20 5972 39 1 16 chr10 22733203 22733898 -122855390 + SVA Other Other 702 1386 0 508 212 93 8 chr10 22734092 22734210 -122855078 - FLAM_C SINE Alu -1 132 5 1581 150 43 8 chr10 22734218 22734544 -122854744 - AluJb SINE Alu 0 355 21 4366 103 36 6 chr10 22734567 22735205 -122854083 - MER4D LTR ERV1 -246 657 1 949 114 29 7 chr10 22735211 22735351 -122853937 - MER39 LTR ERV1 -269 438 296 867 250 22 14 chr10 22735784 22736018 -122853270 + LTR48 LTR ERV1 11 214 -430 973 121 0 7 chr10 22736042 22736183 -122853105 + FLAM_C SINE Alu 1 140 -3 1895 175 145 30 chr10 22736185 22736689 -122852599 + LTR48 LTR ERV1 226 787 0 2157 119 3 7 chr10 22737006 22737316 -122851972 + AluSx SINE Alu 1 309 -3 393 198 121 36 chr10 22737321 22737437 -122851851 + MIR SINE MIR 30 154 -62 1923 136 0 29 chr10 22738469 22738778 -122850510 + AluJo SINE Alu 1 300 -12 2942 146 14 93 chr10 22738800 22739425 -122849863 - MER6A DNA MER2_type -260 605 33 2123 127 0 7 chr10 22739425 22739725 -122849563 + AluSq SINE Alu 1 298 -15 2942 146 14 93 chr10 22739725 22739755 -122849533 - MER6A DNA MER2_type -832 33 2 1840 162 7 3 chr10 22740177 22740480 -122848808 - AluJo SINE Alu -8 304 1 225 31 62 0 chr10 22740602 22740634 -122848654 - AluY SINE Alu -267 34 1 1532 163 4 4 chr10 22740753 22740993 -122848295 + AluJo SINE Alu 40 279 -33 333 0 0 0 chr10 22740994 22741031 -122848257 + (TAAA)n Simple_repeat Simple_repeat 1 37 0 475 269 82 0 chr10 22741058 22741229 -122848059 + MIR SINE MIR 12 196 -66 1148 137 75 156 chr10 22741529 22741836 -122847452 - AluJo SINE Alu -18 284 3 1828 119 56 0 chr10 22741847 22742152 -122847136 - AluSx SINE Alu 0 321 2 2226 121 0 6 chr10 22742521 22742834 -122846454 - AluSq SINE Alu -2 311 1 422 186 153 0 chr10 22742869 22742993 -122846295 + L1ME4a LINE L1 5979 6121 0 1826 167 6 16 chr10 22743010 22743321 -122845967 + AluJb SINE Alu 5 312 0 792 204 0 0 chr10 22743346 22743478 -122845810 + FLAM_A SINE Alu 1 132 -1 2276 99 7 3 chr10 22743613 22743916 -122845372 - AluSq SINE Alu -7 306 3 439 239 78 14 chr10 22744391 22744419 -122844869 - MER5A DNA MER1_type 0 189 164 1768 162 3 31 chr10 22744419 22744740 -122844548 - AluJo SINE Alu 0 312 1 439 239 78 14 chr10 22744740 22744853 -122844435 - MER5A DNA MER1_type -25 164 39 806 171 0 0 chr10 22744881 22745004 -122844284 + FLAM_C SINE Alu 1 123 -20 1640 176 28 3 chr10 22745022 22745138 -122844150 + AluJb SINE Alu 1 113 -199 200 86 29 0 chr10 22745138 22745173 -122844115 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 1640 176 28 3 chr10 22745173 22745340 -122843948 + AluJb SINE Alu 113 291 -21 279 303 11 22 chr10 22745341 22745430 -122843858 - MER5B DNA MER1_type -30 148 61 1712 75 13 0 chr10 22745503 22745729 -122843559 - L1PA10 LINE L1 -1 6167 5939 1827 169 7 10 chr10 22745946 22746241 -122843047 + AluJo SINE Alu 6 299 -13 1758 180 0 27 chr10 22746241 22746380 -122842908 + AluSx SINE Alu 2 143 -169 2215 110 3 0 chr10 22746380 22746672 -122842616 + AluSp SINE Alu 1 293 -20 1758 180 0 27 chr10 22746672 22746826 -122842462 + AluSx SINE Alu 143 287 -25 23 78 0 0 chr10 22746828 22746879 -122842409 + AT_rich Low_complexity Low_complexity 1 51 0 825 140 0 0 chr10 22746922 22747036 -122842252 + FLAM_C SINE Alu 11 124 -19 2582 146 21 5 chr10 22747060 22747479 -122841809 + MSTA LTR MaLR 3 428 0 1245 181 0 0 chr10 22748489 22748688 -122840600 + AluJb SINE Alu 86 284 -28 2133 118 0 7 chr10 22748706 22749038 -122840250 - AluSx SINE Alu 0 330 1 257 259 62 0 chr10 22749182 22749263 -122840025 - L2 LINE L2 -1 3312 3227 540 280 50 61 chr10 22749291 22749424 -122839864 + Charlie8 DNA MER1_type 1 131 -210 2295 97 3 0 chr10 22749424 22749723 -122839565 + AluSg SINE Alu 2 301 -9 540 280 50 61 chr10 22749723 22749850 -122839438 + Charlie8 DNA MER1_type 131 258 -83 183 156 0 0 chr10 22751049 22751081 -122838207 + (TA)n Simple_repeat Simple_repeat 2 33 0 194 222 0 22 chr10 22751191 22751236 -122838052 + MIR SINE MIR 97 140 -68 2082 164 0 0 chr10 22751246 22751558 -122837730 + AluJb SINE Alu 1 312 0 2205 105 7 3 chr10 22751558 22751863 -122837425 + AluSc SINE Alu 1 306 -3 490 315 63 57 chr10 22752160 22752606 -122836682 + L1MEd LINE L1 323 774 -5345 2442 81 3 0 chr10 22752606 22752904 -122836384 + AluSp SINE Alu 2 300 -13 490 315 63 57 chr10 22752904 22753016 -122836272 + L1MEd LINE L1 774 884 -5235 492 239 60 0 chr10 22753041 22753158 -122836130 - L2 LINE L2 -19 3294 3171 24 67 0 0 chr10 22753261 22753306 -122835982 + AT_rich Low_complexity Low_complexity 1 45 0 2172 104 3 10 chr10 22753746 22754044 -122835244 - AluSc SINE Alu -13 296 1 2155 110 0 26 chr10 22754044 22754352 -122834936 - AluSx SINE Alu -12 300 1 849 79 0 9 chr10 22754352 22754466 -122834822 - MER41B LTR ERV1 -477 158 46 2179 121 0 0 chr10 22754713 22755020 -122834268 + AluSx SINE Alu 1 307 -5 2207 100 0 39 chr10 22755617 22755928 -122833360 - AluSg1 SINE Alu -8 301 3 22 0 0 0 chr10 22755934 22755956 -122833332 + AT_rich Low_complexity Low_complexity 1 22 0 247 226 48 0 chr10 22755989 22756051 -122833237 - L2 LINE L2 0 3272 3208 22 0 0 0 chr10 22756476 22756498 -122832790 + AT_rich Low_complexity Low_complexity 1 22 0 1882 153 11 3 chr10 22756531 22756818 -122832470 + AluSx SINE Alu 1 289 -23 1976 154 7 0 chr10 22758053 22758346 -122830942 - AluJb SINE Alu -17 295 1 1661 197 20 0 chr10 22759009 22759313 -122829975 - AluJo SINE Alu -2 310 1 291 218 23 11 chr10 22759381 22759468 -122829820 - LTR33 LTR ERVL -3 518 431 1088 196 3 107 chr10 22759468 22759759 -122829529 - MLT1B LTR MaLR 0 390 130 999 193 0 0 chr10 22759759 22759920 -122829368 - FRAM SINE Alu -15 161 1 787 156 0 21 chr10 22759921 22760062 -122829226 - MLT1B LTR MaLR -252 138 1 2133 125 7 0 chr10 22760062 22760365 -122828923 + AluSx SINE Alu 1 305 -7 336 295 9 0 chr10 22760366 22760471 -122828817 - LTR33 LTR ERVL -85 436 331 606 172 52 0 chr10 22760493 22760609 -122828679 + FRAM SINE Alu 55 176 0 2170 100 41 0 chr10 22760612 22760903 -122828385 + AluSg SINE Alu 1 303 -7 2337 122 3 0 chr10 22761734 22762045 -122827243 + AluSx SINE Alu 1 312 0 2346 77 0 3 chr10 22762157 22762442 -122826846 + AluSc SINE Alu 10 293 -16 847 157 0 8 chr10 22762630 22762764 -122826524 + FLAM_C SINE Alu 1 133 0 2345 81 0 3 chr10 22762826 22763123 -122826165 - AluY SINE Alu -10 301 6 282 29 0 0 chr10 22763139 22763174 -122826114 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2347 71 0 4 chr10 22763177 22763458 -122825830 - AluSq SINE Alu -33 280 1 2129 135 0 3 chr10 22763459 22763789 -122825499 - AluSx SINE Alu 0 312 1 268 197 0 0 chr10 22764126 22764187 -122825101 + L1MB4 LINE L1 6120 6180 0 2441 93 0 0 chr10 22764548 22764859 -122824429 + AluY SINE Alu 1 311 0 2487 90 0 0 chr10 22764877 22765176 -122824112 + AluSg SINE Alu 1 299 -11 1962 147 3 17 chr10 22765180 22765479 -122823809 + AluSx SINE Alu 1 295 -17 377 333 38 0 chr10 22765548 22765680 -122823608 - L2 LINE L2 -2 3270 3134 2314 84 0 23 chr10 22765824 22766133 -122823155 - AluSc SINE Alu -7 302 1 2137 136 0 16 chr10 22766692 22767001 -122822287 + AluSx SINE Alu 1 304 -8 1075 158 0 0 chr10 22767214 22767379 -122821909 + AluSg/x SINE Alu 135 299 -11 2066 113 0 63 chr10 22767624 22767943 -122821345 + AluSg SINE Alu 8 306 -4 1083 113 0 108 chr10 22767954 22768139 -122821149 + AluJb SINE Alu 136 300 -12 401 341 14 0 chr10 22768146 22768284 -122821004 + L1MC4a LINE L1 5538 5677 -2131 400 266 23 62 chr10 22768300 22768477 -122820811 + L1MC4a LINE L1 5764 5933 -1875 2173 130 0 0 chr10 22768573 22768874 -122820414 + AluSx SINE Alu 12 312 0 677 240 0 0 chr10 22769008 22769137 -122820151 + FLAM_A SINE Alu 1 129 -4 1646 97 0 0 chr10 22769174 22769381 -122819907 + AluSc SINE Alu 82 288 -21 2505 64 0 0 chr10 22769401 22769699 -122819589 + AluY SINE Alu 1 298 -13 604 146 0 0 chr10 22769744 22769833 -122819455 - AluSg/x SINE Alu -21 288 200 499 269 15 23 chr10 22770027 22770157 -122819131 + FLAM_A SINE Alu 1 129 -4 1646 97 0 0 chr10 22770197 22770404 -122818884 + AluSc SINE Alu 82 288 -21 2505 64 0 0 chr10 22770424 22770722 -122818566 + AluY SINE Alu 1 298 -13 2149 114 0 0 chr10 22770767 22771047 -122818241 - AluSx SINE Alu -21 291 12 1797 183 3 7 chr10 22771525 22771820 -122817468 + AluJo SINE Alu 1 294 -18 2064 142 0 26 chr10 22772191 22772501 -122816787 + AluSx SINE Alu 1 302 -10 1716 115 0 0 chr10 22772627 22772853 -122816435 - AluSg/x SINE Alu -4 305 80 1961 126 19 0 chr10 22772948 22773217 -122816071 + AluSx SINE Alu 23 296 -16 2379 162 25 32 chr10 22773464 22773855 -122815433 + MSTA LTR MaLR 1 390 -38 2135 123 26 0 chr10 22773855 22774157 -122815131 - AluSx SINE Alu -1 311 2 2379 162 25 32 chr10 22774157 22774196 -122815092 + MSTA LTR MaLR 390 428 0 2021 128 12 40 chr10 22774388 22774709 -122814579 - AluSx SINE Alu 0 312 1 180 111 0 0 chr10 22774718 22774745 -122814543 + (TA)n Simple_repeat Simple_repeat 1 27 0 1955 136 10 10 chr10 22774745 22775030 -122814258 - AluSx SINE Alu -24 288 1 2232 132 0 3 chr10 22775042 22775353 -122813935 - AluSg SINE Alu 0 310 1 1947 169 0 0 chr10 22775418 22775719 -122813569 - AluJb SINE Alu -11 301 1 4717 160 34 21 chr10 22775719 22776390 -122812898 + Charlie1 DNA MER1_type 1780 2469 -292 2574 77 3 0 chr10 22776390 22776701 -122812587 - AluSp SINE Alu -1 312 1 4717 160 34 21 chr10 22776701 22776998 -122812290 + Charlie1 DNA MER1_type 2469 2761 0 2389 94 3 0 chr10 22777668 22777966 -122811322 + AluSg SINE Alu 1 299 -11 868 159 0 0 chr10 22778126 22778258 -122811030 + FLAM_C SINE Alu 1 132 -1 30 0 0 0 chr10 22778406 22778436 -122810852 + AT_rich Low_complexity Low_complexity 1 30 0 1269 111 28 0 chr10 22778472 22778652 -122810636 - AluSx SINE Alu -1 311 127 911 123 46 0 chr10 22778755 22778885 -122810403 - AluSx SINE Alu -177 136 1 548 203 36 7 chr10 22778894 22779032 -122810256 - MLT1J2 LTR MaLR -308 142 1 2129 95 0 0 chr10 22779068 22779332 -122809956 + AluSx SINE Alu 1 264 -48 398 322 21 73 chr10 22779354 22779587 -122809701 - L2 LINE L2 -432 2882 2662 760 167 7 43 chr10 22779587 22779725 -122809563 + FLAM_C SINE Alu 1 133 0 2357 96 0 0 chr10 22779800 22780093 -122809195 - AluSg SINE Alu -17 293 1 192 340 124 10 chr10 22780111 22780305 -122808983 - L2 LINE L2 -952 2362 2147 416 283 9 0 chr10 22780380 22780486 -122808802 + MER63A DNA MER1_type 104 210 0 2364 72 7 10 chr10 22780540 22780845 -122808443 + AluY SINE Alu 1 304 -7 1253 111 0 28 chr10 22780845 22781026 -122808262 + AluSg/x SINE Alu 134 309 -3 242 352 11 80 chr10 22781093 22781155 -122808133 - L2 LINE L2 -1357 1957 1892 1761 144 10 40 chr10 22781155 22781453 -122807835 - AluJb SINE Alu -14 298 10 242 352 11 80 chr10 22781453 22781566 -122807722 - L2 LINE L2 -1422 1892 1794 353 169 56 0 chr10 22781566 22781655 -122807633 + AluJ/FLAM SINE Alu 2 95 -207 23 33 0 0 chr10 22781778 22781808 -122807480 + AT_rich Low_complexity Low_complexity 1 30 0 1043 172 0 6 chr10 22781843 22782012 -122807276 + AluSg/x SINE Alu 124 291 -19 292 234 0 0 chr10 22782012 22782076 -122807212 + U3 snRNA snRNA 3 66 -151 868 154 0 0 chr10 22782144 22782267 -122807021 - FLAM_A SINE Alu -10 123 1 1659 160 25 7 chr10 22782391 22782673 -122806615 + AluJb SINE Alu 18 304 -8 516 322 109 22 chr10 22782701 22782968 -122806320 + L2 LINE L2 3016 3305 -8 2240 123 7 0 chr10 22782982 22783291 -122805997 + AluSx SINE Alu 1 311 -1 2206 101 31 0 chr10 22783415 22783703 -122805585 - AluSq SINE Alu -15 298 2 1864 119 20 0 chr10 22783752 22784004 -122805284 - AluSx SINE Alu -55 257 1 857 216 267 26 chr10 22784044 22784460 -122804828 - MLT1H LTR MaLR -9 540 25 1357 215 9 87 chr10 22784576 22784911 -122804377 + AluJo SINE Alu 1 309 -3 1576 148 3 77 chr10 22785499 22785810 -122803478 - AluJb SINE Alu -14 298 11 23 0 0 0 chr10 22786237 22786260 -122803028 + AT_rich Low_complexity Low_complexity 1 23 0 914 192 0 13 chr10 22786316 22786472 -122802816 - FRAM SINE Alu -11 165 12 21 0 0 0 chr10 22787474 22787495 -122801793 + AT_rich Low_complexity Low_complexity 1 21 0 2327 101 0 7 chr10 22788309 22788607 -122800681 + AluSg SINE Alu 1 296 -14 22 35 0 0 chr10 22789353 22789382 -122799906 + AT_rich Low_complexity Low_complexity 1 29 0 2210 110 7 13 chr10 22790072 22790382 -122798906 + AluSg SINE Alu 1 308 -2 301 241 0 25 chr10 22798652 22798731 -122790557 + GA-rich Low_complexity Low_complexity 3 79 0 2399 83 3 10 chr10 22801678 22801992 -122787296 - AluSx SINE Alu 0 312 1 21 36 0 0 chr10 22802634 22802662 -122786626 + AT_rich Low_complexity Low_complexity 1 28 0 195 42 0 0 chr10 22803660 22803684 -122785604 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 185 228 140 18 chr10 22804386 22804443 -122784845 - L2 LINE L2 0 3272 3209 441 0 0 0 chr10 22805551 22805600 -122783688 + (TG)n Simple_repeat Simple_repeat 2 50 0 211 213 27 0 chr10 22805601 22805676 -122783612 + GA-rich Low_complexity Low_complexity 2 78 0 26 50 0 0 chr10 22806981 22807021 -122782267 + GC_rich Low_complexity Low_complexity 1 40 0 29 60 0 0 chr10 22807471 22807521 -122781767 + GC_rich Low_complexity Low_complexity 1 50 0 279 0 0 0 chr10 22807782 22807813 -122781475 + (T)n Simple_repeat Simple_repeat 1 31 0 24 0 0 0 chr10 22808193 22808217 -122781071 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr10 22808632 22808653 -122780635 + AT_rich Low_complexity Low_complexity 1 21 0 2471 78 7 0 chr10 22810963 22811269 -122778019 + AluSx SINE Alu 3 310 -2 390 91 0 0 chr10 22813563 22813618 -122775670 + (TCC)n Simple_repeat Simple_repeat 2 56 0 393 22 0 0 chr10 22813797 22813843 -122775445 + (TGG)n Simple_repeat Simple_repeat 2 47 0 22 0 0 0 chr10 22818754 22818776 -122770512 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr10 22821027 22821058 -122768230 + GC_rich Low_complexity Low_complexity 1 31 0 208 121 0 0 chr10 22821082 22821115 -122768173 + (GGGGA)n Simple_repeat Simple_repeat 2 34 0 37 0 0 0 chr10 22822136 22822173 -122767115 + GC_rich Low_complexity Low_complexity 1 37 0 252 189 19 0 chr10 22825407 22825460 -122763828 - L2 LINE L2 -7 3265 3212 315 0 0 0 chr10 22826762 22826797 -122762491 + (TA)n Simple_repeat Simple_repeat 2 36 0 323 296 12 0 chr10 22826820 22826901 -122762387 + L2 LINE L2 3230 3311 -2 24 0 0 0 chr10 22827630 22827654 -122761634 + AT_rich Low_complexity Low_complexity 1 24 0 1669 199 3 3 chr10 22827880 22828171 -122761117 - AluJb SINE Alu -21 291 1 22 0 0 0 chr10 22828298 22828320 -122760968 + AT_rich Low_complexity Low_complexity 1 22 0 637 173 73 0 chr10 22828324 22828434 -122760854 + FLAM_C SINE Alu 1 118 -15 2329 93 0 16 chr10 22828448 22828760 -122760528 + AluY SINE Alu 1 307 -4 813 164 0 23 chr10 22828760 22828888 -122760400 - AluJo/FLAM SINE Alu -177 125 1 1908 131 0 0 chr10 22829215 22829475 -122759813 + AluSq SINE Alu 1 260 -53 200 33 0 33 chr10 22829484 22829514 -122759774 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2125 126 14 0 chr10 22829565 22829859 -122759429 + AluSx SINE Alu 1 298 -14 3061 145 32 21 chr10 22829860 22830424 -122758864 + L1MB3 LINE L1 5604 6173 -10 2031 129 0 14 chr10 22830425 22830719 -122758569 - AluSx SINE Alu -22 290 1 32 43 0 0 chr10 22830777 22830823 -122758465 + AT_rich Low_complexity Low_complexity 1 46 0 2239 101 24 7 chr10 22830952 22831248 -122758040 - AluSq SINE Alu -12 301 1 792 270 69 13 chr10 22831339 22831572 -122757716 + MLT2E LTR ERVL 8 253 -375 624 272 13 64 chr10 22831613 22831758 -122757530 + MLT2E LTR ERVL 338 468 -160 1740 163 7 17 chr10 22831758 22832058 -122757230 - AluJo SINE Alu -13 299 3 624 272 13 64 chr10 22832058 22832147 -122757141 + MLT2E LTR ERVL 468 560 -68 819 189 6 24 chr10 22832162 22832331 -122756957 - AluJo SINE Alu -74 238 73 1612 173 69 7 chr10 22832960 22833249 -122756039 + AluJb SINE Alu 5 311 -1 2174 115 3 7 chr10 22833257 22833561 -122755727 + AluSg1 SINE Alu 1 303 -6 680 229 0 0 chr10 22833825 22833956 -122755332 + AluJo/FLAM SINE Alu 1 131 -171 2224 133 0 0 chr10 22833959 22834260 -122755028 + AluSq SINE Alu 2 302 -11 1761 162 7 14 chr10 22834284 22834568 -122754720 + AluJb SINE Alu 1 282 -30 759 91 0 0 chr10 22834594 22834693 -122754595 + HY3 scRNA scRNA 1 99 -2 2095 119 6 13 chr10 22835694 22836005 -122753283 - AluSx SINE Alu -3 309 1 1508 175 27 38 chr10 22836350 22836554 -122752734 - AluJb SINE Alu -23 289 87 2140 111 3 13 chr10 22836554 22836852 -122752436 - AluSp SINE Alu -18 295 1 1508 175 27 38 chr10 22836852 22836939 -122752349 - AluJb SINE Alu -225 87 1 1141 138 6 0 chr10 22837054 22837228 -122752060 - AluSg/x SINE Alu -4 308 134 2264 102 0 13 chr10 22837228 22837533 -122751755 - AluSq SINE Alu -12 301 1 1603 168 45 41 chr10 22837772 22837919 -122751369 - AluJb SINE Alu -19 293 148 2366 91 7 10 chr10 22837919 22838227 -122751061 - AluSp SINE Alu -6 307 1 1603 168 45 41 chr10 22838227 22838371 -122750917 - AluJb SINE Alu -164 148 1 180 0 0 0 chr10 22839177 22839197 -122750091 + (T)n Simple_repeat Simple_repeat 1 20 0 2103 122 17 0 chr10 22839257 22839552 -122749736 + AluSq SINE Alu 2 301 -12 1211 119 28 0 chr10 22839553 22839730 -122749558 + AluSg/x SINE Alu 126 307 -5 1570 135 82 50 chr10 22839737 22839873 -122749415 + AluJb SINE Alu 1 131 -181 1865 148 13 17 chr10 22839873 22840171 -122749117 + AluSx SINE Alu 1 297 -15 1570 135 82 50 chr10 22840171 22840315 -122748973 + AluJb SINE Alu 131 290 -22 26 50 0 0 chr10 22840444 22840484 -122748804 + AT_rich Low_complexity Low_complexity 1 40 0 1792 167 3 3 chr10 22840642 22840941 -122748347 + AluSx SINE Alu 1 299 -13 1554 168 21 10 chr10 22840991 22841153 -122748135 - AluJo SINE Alu -18 294 126 2163 107 7 7 chr10 22841153 22841451 -122747837 - AluSx SINE Alu -14 298 1 1554 168 21 10 chr10 22841451 22841579 -122747709 - AluJo SINE Alu -186 126 1 2107 118 7 3 chr10 22842052 22842341 -122746947 + AluSq SINE Alu 1 290 -23 1328 209 17 50 chr10 22842360 22842661 -122746627 + AluJo SINE Alu 2 292 -20 1214 93 43 0 chr10 22842721 22842883 -122746405 - AluSg/x SINE Alu -9 303 135 2284 116 0 0 chr10 22842884 22843186 -122746102 - AluSp SINE Alu -11 302 1 32 0 0 0 chr10 22843219 22843251 -122746037 + AT_rich Low_complexity Low_complexity 1 32 0 2132 120 0 3 chr10 22843252 22843544 -122745744 - AluSp SINE Alu -22 291 1 326 305 61 8 chr10 22843768 22843899 -122745389 - MIR SINE MIR -3 259 122 2352 88 3 0 chr10 22844629 22844923 -122744365 + AluSp SINE Alu 1 295 -18 1593 201 7 0 chr10 22845448 22845732 -122743556 - AluJo SINE Alu -26 286 1 26 0 0 0 chr10 22845829 22845855 -122743433 + AT_rich Low_complexity Low_complexity 1 26 0 1826 163 7 3 chr10 22845855 22846144 -122743144 - AluSx SINE Alu -22 290 1 1372 149 12 99 chr10 22846176 22846498 -122742790 - AluJb SINE Alu -18 294 1 2145 101 28 0 chr10 22846500 22846788 -122742500 - AluSp SINE Alu -17 296 1 1162 92 0 0 chr10 22846793 22846935 -122742353 - AluSq/x SINE Alu -171 142 1 707 150 9 0 chr10 22847164 22847277 -122742011 - FLAM_A SINE Alu -5 137 24 1957 121 6 58 chr10 22847285 22847598 -122741690 - AluSx SINE Alu -9 303 7 306 280 86 31 chr10 22847945 22848128 -122741160 - L1MEd LINE L1 -4862 1257 1055 2192 118 13 0 chr10 22848128 22848434 -122740854 - AluY SINE Alu -1 310 1 306 280 86 31 chr10 22848434 22848507 -122740781 - L1MEd LINE L1 -5064 1055 987 1969 104 45 7 chr10 22848888 22849175 -122740113 - AluSg SINE Alu -12 298 1 1950 100 86 4 chr10 22849425 22849704 -122739584 - AluSx SINE Alu -10 302 1 1904 158 3 3 chr10 22850300 22850597 -122738691 - AluSx SINE Alu -15 297 1 2264 86 22 32 chr10 22850677 22850990 -122738298 - AluSg SINE Alu 0 310 1 243 0 0 0 chr10 22851055 22851082 -122738206 + (T)n Simple_repeat Simple_repeat 1 27 0 21 0 0 0 chr10 22851520 22851541 -122737747 + AT_rich Low_complexity Low_complexity 1 21 0 1847 141 11 0 chr10 22851566 22851836 -122737452 - AluSx SINE Alu -18 294 22 908 172 7 0 chr10 22851838 22851989 -122737299 - AluJo SINE Alu -158 154 3 2376 99 0 3 chr10 22852154 22852457 -122736831 - AluSq SINE Alu -11 302 1 199 140 0 53 chr10 22852517 22852574 -122736714 + (TTTTC)n Simple_repeat Simple_repeat 3 56 0 285 261 34 34 chr10 22852578 22852697 -122736591 + CT-rich Low_complexity Low_complexity 3 121 0 1569 230 112 72 chr10 22852711 22853091 -122736197 - HAL1 LINE L1 -606 1901 1538 2071 140 3 3 chr10 22853091 22853391 -122735897 - AluSx SINE Alu -12 300 1 1569 230 112 72 chr10 22853391 22853405 -122735883 - HAL1 LINE L1 -969 1538 1526 2267 126 7 0 chr10 22853405 22853715 -122735573 - AluSx SINE Alu 0 312 1 1569 230 112 72 chr10 22853715 22854084 -122735204 - HAL1 LINE L1 -981 1526 1106 265 205 116 4 chr10 22854136 22854205 -122735083 - AluJ/FLAM SINE Alu -236 66 1 2163 95 3 33 chr10 22854219 22854524 -122734764 - AluSc SINE Alu -13 296 1 2234 107 7 0 chr10 22854574 22854884 -122734404 - AluSq SINE Alu -1 312 1 259 278 120 73 chr10 22854888 22854965 -122734323 - HAL1 LINE L1 -1429 1078 1006 209 56 0 28 chr10 22854965 22855001 -122734287 + (TTTAA)n Simple_repeat Simple_repeat 3 37 0 1993 133 3 0 chr10 22855001 22855286 -122734002 - AluSx SINE Alu -26 286 1 259 278 120 73 chr10 22855286 22855439 -122733849 - HAL1 LINE L1 -1501 1006 862 1945 108 36 46 chr10 22855439 22855744 -122733544 - AluSp SINE Alu -11 302 1 2125 92 46 0 chr10 22855745 22856026 -122733262 - AluSx SINE Alu -18 294 1 259 278 120 73 chr10 22856026 22856133 -122733155 - HAL1 LINE L1 -1644 863 721 265 258 96 110 chr10 22856261 22856626 -122732662 - HAL1 LINE L1 -1995 512 153 421 251 262 55 chr10 22857329 22857676 -122731612 - MLT1K LTR MaLR -167 421 3 2356 99 3 3 chr10 22857701 22858014 -122731274 - AluSq SINE Alu 0 313 1 502 141 10 61 chr10 22858143 22858242 -122731046 + FRAM SINE Alu 77 170 -6 769 128 0 66 chr10 22858296 22858448 -122730840 - FLAM_C SINE Alu 0 143 5 28 0 0 0 chr10 22858456 22858484 -122730804 + AT_rich Low_complexity Low_complexity 1 28 0 385 243 86 111 chr10 22858530 22858850 -122730438 - L1M4 LINE L1 -1273 4873 4563 2117 121 14 0 chr10 22858850 22859140 -122730148 - AluSg SINE Alu -15 295 2 385 243 86 111 chr10 22859140 22859214 -122730074 - L1M4 LINE L1 -1583 4563 4489 3757 184 42 65 chr10 22859218 22859774 -122729514 - L1MB4 LINE L1 -3 6177 5610 2183 80 28 3 chr10 22859774 22860062 -122729226 - AluSp SINE Alu -18 295 1 3757 184 42 65 chr10 22860062 22860193 -122729095 - L1MB4 LINE L1 -570 5610 5478 1296 236 51 20 chr10 22860193 22860348 -122728940 - AluJo SINE Alu 0 302 153 222 37 0 0 chr10 22860348 22860375 -122728913 + (CCA)n Simple_repeat Simple_repeat 2 28 0 1296 236 51 20 chr10 22860375 22860512 -122728776 - AluJo SINE Alu -149 153 1 3757 184 42 65 chr10 22860512 22861001 -122728287 - L1MB4 LINE L1 -702 5478 4979 2020 102 0 48 chr10 22861001 22861322 -122727966 - AluSg SINE Alu 0 307 1 3757 184 42 65 chr10 22861322 22861575 -122727713 - L1MB4 LINE L1 -1201 4979 4722 2264 109 0 0 chr10 22861575 22861868 -122727420 - AluSp SINE Alu -19 294 2 3757 184 42 65 chr10 22861868 22862089 -122727199 - L1MB4 LINE L1 -1458 4722 4583 2381 109 0 0 chr10 22862089 22862400 -122726888 - AluSq SINE Alu -1 312 2 3757 184 42 65 chr10 22862400 22862543 -122726745 - L1MB4 LINE L1 -1597 4583 4438 1940 81 12 0 chr10 22862573 22862820 -122726468 - AluSp SINE Alu -1 312 63 281 95 0 0 chr10 22862820 22862862 -122726426 - L1M4c LINE L1 -6326 58 17 * 1125 206 124 57 chr10 22862861 22863006 -122726282 - L1MD1 LINE L1 -197 6045 5911 2046 129 7 0 chr10 22863006 22863300 -122725988 + AluSx SINE Alu 1 296 -16 1125 206 124 57 chr10 22863300 22863553 -122725735 - L1MD1 LINE L1 -331 5911 5433 2296 78 0 0 chr10 22863555 22863875 -122725413 - AluY SINE Alu 0 320 1 1055 178 138 40 chr10 22863886 22864133 -122725155 - AluJo SINE Alu -21 291 21 426 156 3 46 chr10 22864146 22864237 -122725051 - L1MD1 LINE L1 -802 5440 5362 659 183 0 0 chr10 22864237 22864341 -122724947 - U6 snRNA snRNA -3 104 1 426 156 3 46 chr10 22864341 22864386 -122724902 - L1MD1 LINE L1 -880 5362 5317 1544 82 0 10 chr10 22864410 22864604 -122724684 + AluSp SINE Alu 108 299 -14 1144 212 79 80 chr10 22864605 22865064 -122724224 - L1MDa LINE L1 -3464 3076 2618 2055 137 0 3 chr10 22865064 22865370 -122723918 - AluSg SINE Alu -5 305 1 1793 181 0 0 chr10 22865370 22865669 -122723619 - AluJo SINE Alu -13 299 1 1144 212 79 80 chr10 22865669 22865709 -122723579 - L1MDa LINE L1 -3921 2619 2580 1914 146 10 16 chr10 22865709 22866018 -122723270 - AluSx SINE Alu -5 307 1 1144 212 79 80 chr10 22866018 22866100 -122723188 - L1MDa LINE L1 -3960 2580 2499 1940 147 14 0 chr10 22866100 22866386 -122722902 - AluSq SINE Alu -18 295 6 1144 212 79 80 chr10 22866386 22866463 -122722825 - L1MDa LINE L1 -4041 2499 2404 2378 86 3 0 chr10 22866575 22866876 -122722412 - AluSp SINE Alu -11 302 1 2608 268 52 38 chr10 22866884 22867579 -122721709 - L1MDa LINE L1 -5452 1088 288 2255 96 7 0 chr10 22867579 22867881 -122721407 - AluSx SINE Alu -8 304 1 2608 268 52 38 chr10 22867881 22868173 -122721115 - L1MDa LINE L1 -6252 288 2 1021 225 205 10 chr10 22868164 22868355 -122720933 - L1MEc LINE L1 -2958 3257 3105 * 1882 123 7 32 chr10 22868355 22868698 -122720590 - AluSg1 SINE Alu 0 309 1 1021 225 205 10 chr10 22868698 22869018 -122720270 - L1MEc LINE L1 -3110 3105 2634 818 175 12 31 chr10 22869029 22869189 -122720099 - AluJo/FRAM SINE Alu -22 290 134 2296 92 7 0 chr10 22869189 22869484 -122719804 - AluSx SINE Alu -15 297 1 1283 155 97 54 chr10 22869508 22869661 -122719627 - AluJb SINE Alu -22 290 145 2214 122 3 0 chr10 22869661 22869972 -122719316 - AluSp SINE Alu -1 312 1 306 73 0 0 chr10 22869976 22870017 -122719271 + (TG)n Simple_repeat Simple_repeat 2 42 0 1283 155 97 54 chr10 22870017 22870136 -122719152 - AluJb SINE Alu -169 143 1 2381 264 60 37 chr10 22870393 22871450 -122717838 - L1MEc LINE L1 -5308 1088 8 3190 222 131 98 chr10 22871460 22872380 -122716908 - L1MEc LINE L1 -743 5472 4584 1890 146 37 3 chr10 22872380 22872674 -122716614 - AluSx SINE Alu -8 304 1 3190 222 131 98 chr10 22872674 22873052 -122716236 - L1MEc LINE L1 -1631 4584 4220 690 223 7 14 chr10 22873052 22873191 -122716097 - MER74A LTR ERVL 0 558 421 3190 222 131 98 chr10 22873191 22873381 -122715907 - L1MEc LINE L1 -1995 4220 4038 1501 118 49 37 chr10 22873381 22873627 -122715661 - AluSx SINE Alu -63 249 1 3190 222 131 98 chr10 22873627 22874170 -122715118 - L1MEc LINE L1 -2177 4038 3514 4495 117 13 11 chr10 22874170 22874804 -122714484 - MER41B LTR ERV1 0 635 1 3190 222 131 98 chr10 22874804 22874942 -122714346 - L1MEc LINE L1 -2701 3514 3382 297 0 0 0 chr10 22874942 22874975 -122714313 + (TTTTA)n Simple_repeat Simple_repeat 1 33 0 1852 154 0 18 chr10 22874975 22875260 -122714028 - AluSx SINE Alu -32 280 1 3190 222 131 98 chr10 22875260 22875654 -122713634 - L1MEc LINE L1 -2832 3383 2445 1855 157 0 37 chr10 22875671 22875995 -122713293 - AluSx SINE Alu 0 312 1 2355 68 10 0 chr10 22876006 22876302 -122712986 - AluY SINE Alu -12 299 1 272 233 105 0 chr10 22876304 22876390 -122712898 - L1MEc LINE L1 -4004 2392 2298 2367 97 0 0 chr10 22876395 22876694 -122712594 - AluSp SINE Alu -14 299 1 3223 202 71 27 chr10 22876721 22877225 -122712063 - L1MB7 LINE L1 -106 6078 5597 2147 110 3 29 chr10 22877225 22877534 -122711754 - AluSx SINE Alu -11 301 1 3223 202 71 27 chr10 22877534 22877642 -122711646 - L1MB7 LINE L1 -587 5597 5495 2067 130 3 16 chr10 22877642 22877958 -122711330 - AluSx SINE Alu 0 312 1 3223 202 71 27 chr10 22877958 22878439 -122710849 - L1MB7 LINE L1 -689 5495 4936 1352 278 95 52 chr10 22878507 22879326 -122709962 - L1MEc LINE L1 -4382 2014 1145 2320 93 3 3 chr10 22879326 22879626 -122709662 - AluSp SINE Alu -13 300 1 1352 278 95 52 chr10 22879626 22879770 -122709518 - L1MEc LINE L1 -5251 1145 1009 906 186 11 11 chr10 22879770 22879947 -122709341 - FRAM SINE Alu 0 176 1 2351 83 0 7 chr10 22880153 22880453 -122708835 - AluY SINE Alu -13 298 1 1985 138 0 39 chr10 22880464 22880775 -122708513 - AluSg SINE Alu -11 299 1 2420 70 3 7 chr10 22880808 22881109 -122708179 - AluY SINE Alu -11 300 1 1895 113 39 53 chr10 22881120 22881289 -122707999 - MER7C DNA MER2_type -2665 363 200 1826 157 78 28 chr10 22881289 22881646 -122707642 + THE1C LTR MaLR 1 375 0 1895 113 39 53 chr10 22881646 22881813 -122707475 - MER7C DNA MER2_type -2828 200 32 1233 133 76 4 chr10 22881824 22881873 -122707415 + Tigger7 DNA MER2_type 2347 2391 -196 1904 126 19 35 chr10 22881873 22882183 -122707105 - AluSx SINE Alu -7 305 1 1233 133 76 4 chr10 22882183 22882358 -122706930 + Tigger7 DNA MER2_type 2391 2587 0 452 312 141 44 chr10 22882358 22882653 -122706635 - L2 LINE L2 -680 2634 2369 2004 141 10 3 chr10 22882653 22882951 -122706337 + AluSx SINE Alu 1 300 -12 452 312 141 44 chr10 22882951 22883222 -122706066 - L2 LINE L2 -945 2369 2013 1708 187 82 41 chr10 22883232 22883626 -122705662 - MSTB LTR MaLR -1 400 1 2543 48 3 0 chr10 22883636 22883931 -122705357 - AluY SINE Alu -15 296 1 2258 85 0 10 chr10 22883931 22884226 -122705062 - AluSc SINE Alu -17 292 1 804 173 0 0 chr10 22884250 22884377 -122704911 - FLAM_C SINE Alu -16 127 1 279 188 0 50 chr10 22884460 22884561 -122704727 + (TA)n Simple_repeat Simple_repeat 1 96 0 262 322 0 0 chr10 22884572 22884659 -122704629 - L1MC4 LINE L1 -1342 6700 6614 236 261 45 23 chr10 22884581 22884669 -122704619 + L1MC4 LINE L1 6614 6703 -1339 * 1906 145 3 19 chr10 22884676 22884987 -122704301 - AluJb SINE Alu -6 306 1 2168 107 3 3 chr10 22885525 22885825 -122703463 - AluSp SINE Alu -13 300 1 2049 124 10 0 chr10 22886369 22886660 -122702628 + AluSx SINE Alu 1 294 -18 1541 161 9 82 chr10 22886881 22887211 -122702077 + AluJb SINE Alu 1 306 -6 339 225 159 84 chr10 22887718 22887823 -122701465 - L1MC4 LINE L1 -1864 5944 5848 2088 124 16 10 chr10 22887823 22888129 -122701159 - AluSx SINE Alu -3 309 2 339 225 159 84 chr10 22888129 22888414 -122700874 - L1MC4 LINE L1 -1960 5848 5525 351 158 87 47 chr10 22888437 22888564 -122700724 - L1MC4 LINE L1 -2340 5468 5337 1354 156 176 4 chr10 22888584 22888840 -122700448 - AluSg1 SINE Alu -9 300 1 819 224 6 18 chr10 22889088 22889253 -122700035 - FRAM SINE Alu -12 164 2 180 219 0 0 chr10 22889646 22889687 -122699601 + C-rich Low_complexity Low_complexity 3 43 0 1547 168 24 40 chr10 22889707 22890004 -122699284 - AluJo SINE Alu -20 292 1 884 259 39 65 chr10 22890017 22890108 -122699180 - L1MEd LINE L1 -2708 3421 3329 2246 109 3 0 chr10 22890108 22890402 -122698886 - AluSx SINE Alu -17 295 1 884 259 39 65 chr10 22890402 22890800 -122698488 - L1MEd LINE L1 -2800 3329 2945 1511 134 4 35 chr10 22890802 22891063 -122698225 - AluJb SINE Alu 0 312 60 301 243 0 0 chr10 22891098 22891172 -122698116 - L1MEd LINE L1 -3176 2953 2880 24 0 0 0 chr10 22891330 22891354 -122697934 + AT_rich Low_complexity Low_complexity 1 24 0 2055 145 10 0 chr10 22891487 22891784 -122697504 - AluSx SINE Alu -12 300 1 2393 62 0 28 chr10 22892207 22892527 -122696761 - AluY SINE Alu 0 311 1 429 306 97 49 chr10 22892575 22892863 -122696425 - L1MEd LINE L1 -4874 1245 972 1581 183 38 3 chr10 22892863 22893152 -122696136 - AluJo SINE Alu -13 299 1 429 306 97 49 chr10 22893152 22893408 -122695880 - L1MEd LINE L1 -5147 972 661 2079 145 3 0 chr10 22893408 22893719 -122695569 + AluSx SINE Alu 1 312 0 429 306 97 49 chr10 22893719 22893846 -122695442 - L1MEd LINE L1 -5458 661 541 2092 107 13 19 chr10 22894032 22894340 -122694948 + AluSp SINE Alu 1 306 -7 1118 32 0 0 chr10 22894488 22894612 -122694676 + AluSp/q SINE Alu 174 297 -16 26 30 0 0 chr10 22895875 22895908 -122693380 + AT_rich Low_complexity Low_complexity 1 33 0 25 0 0 0 chr10 22896397 22896422 -122692866 + AT_rich Low_complexity Low_complexity 1 25 0 27 0 0 0 chr10 22896514 22896541 -122692747 + AT_rich Low_complexity Low_complexity 1 27 0 3604 230 115 22 chr10 22896831 22897125 -122692163 - L1MC4 LINE L1 0 8042 7777 1971 149 3 7 chr10 22897125 22897433 -122691855 - AluSx SINE Alu -3 309 3 3604 230 115 22 chr10 22897433 22898352 -122690936 - L1MC4 LINE L1 -265 7777 6636 1870 143 17 20 chr10 22898365 22898659 -122690629 + AluSx SINE Alu 1 293 -19 2240 98 3 3 chr10 22898661 22898956 -122690332 + AluSg SINE Alu 1 295 -15 1256 116 0 0 chr10 22898956 22899120 -122690168 + AluSg/x SINE Alu 134 297 -15 470 246 166 0 chr10 22899158 22899345 -122689943 - L1MC4 LINE L1 -1363 6679 6462 1576 174 4 29 chr10 22899354 22899635 -122689653 - AluJb SINE Alu -38 274 1 272 292 81 47 chr10 22899735 22899971 -122689317 - L1M4 LINE L1 -1159 4987 4744 315 0 0 0 chr10 22900132 22900167 -122689121 + (CA)n Simple_repeat Simple_repeat 2 36 0 1679 198 7 7 chr10 22900716 22901009 -122688279 - AluJb SINE Alu -19 293 1 1285 203 23 62 chr10 22901294 22901600 -122687688 - AluJo SINE Alu -8 294 1 207 0 0 0 chr10 22901610 22901633 -122687655 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 2471 47 0 13 chr10 22902497 22902795 -122686493 - AluY SINE Alu -17 294 1 1997 122 13 45 chr10 22902818 22903129 -122686159 - AluSq SINE Alu -12 301 1 230 232 10 61 chr10 22903278 22903377 -122685911 - L1MC5 LINE L1 -51 7910 7817 1860 195 49 42 chr10 22903394 22903845 -122685443 - MLT1C LTR MaLR -13 454 1 1018 238 49 121 chr10 22903846 22904090 -122685198 - MLT1C-int LTR MaLR -1 1734 1474 1742 127 45 4 chr10 22904090 22904358 -122684930 + AluSx SINE Alu 11 289 -23 1018 238 49 121 chr10 22904358 22904596 -122684692 - MLT1C-int LTR MaLR -261 1474 946 852 188 0 0 chr10 22904736 22904874 -122684414 + FAM SINE Alu 1 48 -1 1252 183 20 36 chr10 22904874 22905156 -122684132 - MER47B DNA MER2_type -84 334 2 1390 187 41 10 chr10 22905206 22905500 -122683788 - AluJb SINE Alu -9 303 1 1784 158 121 36 chr10 22905630 22906017 -122683271 + Tigger1 DNA MER2_type 2 421 -1997 4404 147 33 4 chr10 22906017 22906740 -122682548 + Tigger1 DNA MER2_type 1326 2069 -349 661 196 54 0 chr10 22906745 22906857 -122682431 + FLAM_C SINE Alu 2 119 -24 394 228 0 0 chr10 22906879 22906958 -122682330 + Tigger1 DNA MER2_type 2109 2187 -231 2214 100 13 3 chr10 22907082 22907381 -122681907 - AluSp SINE Alu -11 302 1 972 275 105 49 chr10 22907546 22907919 -122681369 - L1M4c LINE L1 -4502 2455 2105 1748 168 0 34 chr10 22907919 22908240 -122681048 - AluJo SINE Alu -2 310 1 972 275 105 49 chr10 22908240 22908573 -122680715 - L1M4c LINE L1 -4852 2105 1659 790 200 111 33 chr10 22908595 22908865 -122680423 - L1M4c LINE L1 -5361 1498 1208 355 220 46 55 chr10 22909298 22909491 -122679797 - L1M4c LINE L1 -5646 1213 798 279 190 0 0 chr10 22909581 22909639 -122679649 - L1MA7 LINE L1 -2 6289 6232 192 77 0 0 chr10 22909645 22909671 -122679617 + (CA)n Simple_repeat Simple_repeat 1 26 0 764 301 82 48 chr10 22909678 22910034 -122679254 - L1M4c LINE L1 -6046 813 446 1030 243 84 13 chr10 22910048 22910357 -122678931 - L1M4c LINE L1 -6489 370 40 32 26 0 0 chr10 22910382 22910421 -122678867 + AT_rich Low_complexity Low_complexity 1 39 0 2332 90 0 37 chr10 22910748 22911070 -122678218 - AluSq SINE Alu -1 312 3 332 261 72 14 chr10 22912435 22912573 -122676715 + MIR SINE MIR 110 255 -7 2264 118 3 0 chr10 22912676 22912982 -122676306 + AluSx SINE Alu 2 308 -4 1801 177 0 13 chr10 22913384 22913695 -122675593 + AluSx SINE Alu 2 308 -4 1854 133 29 42 chr10 22913703 22914011 -122675277 + AluJo SINE Alu 1 304 -8 2362 103 3 0 chr10 22914939 22915250 -122674038 + AluSp SINE Alu 1 312 -1 22 0 0 0 chr10 22915733 22915755 -122673533 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr10 22916341 22916369 -122672919 + AT_rich Low_complexity Low_complexity 1 28 0 198 103 0 0 chr10 22916834 22916863 -122672425 + (TA)n Simple_repeat Simple_repeat 1 29 0 785 154 60 20 chr10 22917636 22917785 -122671503 + AluJb SINE Alu 133 287 -25 1875 116 37 34 chr10 22917990 22918284 -122671004 + AluSg SINE Alu 1 295 -15 778 172 0 0 chr10 22918399 22918527 -122670761 - AluSg/x SINE Alu -14 298 171 1754 124 27 8 chr10 22918528 22918787 -122670501 - AluSg SINE Alu -44 266 3 375 23 0 0 chr10 22918789 22918833 -122670455 + (CA)n Simple_repeat Simple_repeat 2 45 0 2360 68 26 23 chr10 22919682 22919991 -122669297 - AluSg SINE Alu 0 310 1 321 243 27 0 chr10 22920107 22920181 -122669107 + Tigger5 DNA MER2_type 1 76 -2247 396 205 0 0 chr10 22920184 22920262 -122669026 - Tigger5 DNA MER2_type -4 2319 2242 24 53 0 0 chr10 22920414 22920452 -122668836 + AT_rich Low_complexity Low_complexity 1 38 0 1960 109 32 3 chr10 22920461 22920746 -122668542 - AluSq SINE Alu -20 293 1 1916 59 4 43 chr10 22920751 22921007 -122668281 - AluY SINE Alu -15 296 51 2444 58 0 3 chr10 22921014 22921308 -122667980 - AluY SINE Alu -18 293 1 21 36 0 0 chr10 22921367 22921395 -122667893 + GC_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr10 22921657 22921681 -122667607 + AT_rich Low_complexity Low_complexity 1 24 0 1748 145 16 35 chr10 22921910 22922227 -122667061 - AluJo SINE Alu -1 311 1 2299 242 70 27 chr10 22922457 22923209 -122666079 - MER21B LTR ERV1 -60 803 19 321 195 65 26 chr10 22923233 22923310 -122665978 - MER21B LTR ERV1 -776 87 8 185 152 0 30 chr10 22923587 22923620 -122665668 - MIR SINE MIR -145 117 86 572 184 54 78 chr10 22926163 22926408 -122662880 - MSTC LTR MaLR -151 245 3 997 207 51 113 chr10 22926826 22927339 -122661949 - L1MC4 LINE L1 -6 8036 7556 586 312 19 31 chr10 22927497 22927856 -122661432 - MLT1F-int LTR MaLR -770 601 247 1066 246 112 57 chr10 22928004 22928195 -122661093 - MLT1F LTR MaLR 0 542 363 2154 117 3 19 chr10 22928195 22928504 -122660784 - AluSx SINE Alu -8 304 1 1983 116 33 23 chr10 22928504 22928807 -122660481 - AluSx SINE Alu -6 306 1 1066 246 112 57 chr10 22928807 22929017 -122660271 - MLT1F LTR MaLR -178 364 118 184 125 0 42 chr10 22929035 22929083 -122660205 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 234 137 20 0 chr10 22929089 22929140 -122660148 - L1MB4 LINE L1 -2 6178 6127 233 214 236 0 chr10 22929164 22929253 -122660035 - MLT1F LTR MaLR -432 110 1 471 208 72 8 chr10 22929253 22929378 -122659910 - L1MC4 LINE L1 -763 7279 7147 787 178 13 32 chr10 22929592 22929749 -122659539 + FRAM SINE Alu 13 166 -10 806 210 75 50 chr10 22930194 22930582 -122658706 + LTR40b LTR ERVL 1 462 0 2504 58 0 13 chr10 22930793 22931104 -122658184 + AluY SINE Alu 2 308 -3 21 0 0 0 chr10 22931196 22931217 -122658071 + AT_rich Low_complexity Low_complexity 1 21 0 1650 146 158 47 chr10 22931241 22931626 -122657662 - MSTA LTR MaLR 0 428 1 26 30 0 0 chr10 22932183 22932216 -122657072 + AT_rich Low_complexity Low_complexity 1 33 0 187 349 0 15 chr10 22932290 22932356 -122656932 - L2 LINE L2 -8 3305 3241 468 253 57 0 chr10 22932576 22932734 -122656554 - MER104 DNA Tc2 -13 167 1 404 217 160 0 chr10 22932903 22933009 -122656279 + MIR SINE MIR 114 236 -26 1552 168 66 11 chr10 22933186 22933460 -122655828 + AluJo SINE Alu 1 289 -23 2467 238 75 35 chr10 22933472 22933746 -122655542 - L1MC4 LINE L1 -155 7887 7625 1769 127 35 0 chr10 22933746 22934005 -122655283 + AluSx SINE Alu 26 293 -19 2467 238 75 35 chr10 22934005 22934777 -122654511 - L1MC4 LINE L1 -417 7625 6799 1875 134 19 0 chr10 22935141 22935409 -122653879 - AluSx SINE Alu -19 293 21 953 126 0 0 chr10 22935483 22935626 -122653662 - AluSp/q SINE Alu -6 307 165 403 175 0 0 chr10 22935626 22935689 -122653599 - AluS SINE Alu -250 63 1 198 0 0 0 chr10 22935689 22935711 -122653577 + (T)n Simple_repeat Simple_repeat 1 22 0 1675 173 0 29 chr10 22935880 22936193 -122653095 - AluJo SINE Alu -8 304 1 1410 109 5 0 chr10 22936329 22936522 -122652766 - AluSq SINE Alu -4 309 116 3225 294 66 17 chr10 22936748 22937922 -122651366 - HERVL40 LTR ERVL -2769 2761 1530 503 202 0 0 chr10 22937924 22938013 -122651275 - MER58C DNA MER1_type 0 215 127 629 249 75 19 chr10 22938106 22938319 -122650969 - HERVL40 LTR ERVL -3995 1535 1311 545 174 0 0 chr10 22938323 22938409 -122650879 + AluJ/FLAM SINE Alu 1 86 -226 300 244 70 43 chr10 22938441 22938556 -122650732 - HERVL40 LTR ERVL -4218 1312 1195 1014 251 67 25 chr10 22938562 22938889 -122650399 - HERVL40 LTR ERVL -5188 342 2 1762 149 41 28 chr10 22938952 22939754 -122649534 - MER21B LTR ERV1 -49 814 70 286 136 17 17 chr10 22939867 22939926 -122649362 - MER21A LTR ERV1 -864 67 9 229 109 91 0 chr10 22939926 22939981 -122649307 + (TTATA)n Simple_repeat Simple_repeat 5 64 0 451 123 71 18 chr10 22939981 22940151 -122649137 + (TA)n Simple_repeat Simple_repeat 2 180 0 1155 254 70 14 chr10 22940202 22940560 -122648728 - LTR40b LTR ERVL -84 378 1 549 274 82 21 chr10 22940651 22940953 -122648335 - MLT1J1 LTR MaLR -129 321 1 372 283 105 47 chr10 22940975 22941233 -122648055 - HAL1b LINE L1 -14 1334 1062 918 163 11 45 chr10 22941233 22941411 -122647877 + AluJo SINE Alu 104 275 -37 284 256 0 0 chr10 22941429 22941511 -122647777 - HAL1b LINE L1 -331 1017 936 332 301 65 0 chr10 22941529 22941652 -122647636 - MLT1L LTR MaLR -6 609 479 2196 92 3 7 chr10 22941832 22942127 -122647161 + AluSq SINE Alu 1 294 -19 2398 94 0 0 chr10 22942138 22942447 -122646841 + AluSx SINE Alu 1 309 -3 2259 112 0 16 chr10 22942780 22943092 -122646196 - AluSx SINE Alu -1 311 5 826 224 125 13 chr10 22943140 22943453 -122645835 - HAL1b LINE L1 -579 769 422 364 321 77 24 chr10 22943539 22943707 -122645581 - HAL1b LINE L1 -1096 252 76 1579 176 36 13 chr10 22944393 22944694 -122644594 - AluJb SINE Alu -4 308 1 187 384 41 0 chr10 22945368 22945441 -122643847 - L3 LINE CR1 -1273 304 229 2071 140 3 3 chr10 22945686 22945993 -122643295 + AluSx SINE Alu 1 307 -5 2448 66 0 3 chr10 22946617 22946919 -122642369 - AluY SINE Alu -10 301 1 297 263 174 54 chr10 22946940 22947138 -122642150 - L1ME LINE L1 -324 5797 5559 651 209 0 16 chr10 22947138 22947267 -122642021 + FLAM_A SINE Alu 1 127 -6 297 263 174 54 chr10 22947267 22947327 -122641961 - L1ME LINE L1 -562 5559 5508 23 78 0 0 chr10 22947511 22947562 -122641726 + AT_rich Low_complexity Low_complexity 1 51 0 2491 118 6 3 chr10 22948445 22948808 -122640480 - THE1B LTR MaLR 0 364 1 1737 178 0 4 chr10 22948864 22949140 -122640148 - AluJb SINE Alu -37 275 1 444 252 110 62 chr10 22949261 22949680 -122639608 - MLT1H LTR MaLR -107 448 52 318 118 0 78 chr10 22949764 22949850 -122639438 + AluJo SINE Alu 80 139 -163 1136 188 109 33 chr10 22949853 22950129 -122639159 + AluJb SINE Alu 1 297 -15 21 0 0 0 chr10 22950516 22950537 -122638751 + AT_rich Low_complexity Low_complexity 1 21 0 2125 114 0 0 chr10 22950798 22951133 -122638155 - AluSg SINE Alu 0 335 1 2320 109 0 0 chr10 22951664 22951975 -122637313 - AluY SINE Alu 0 311 1 401 283 160 11 chr10 22952110 22952297 -122636991 + MIR SINE MIR 48 262 0 1912 256 71 31 chr10 22952335 22952834 -122636454 - L2 LINE L2 -434 2880 2349 2474 191 43 74 chr10 22952834 22953479 -122635809 - MLT1E2 LTR MaLR -1 625 1 1912 256 71 31 chr10 22953479 22953616 -122635672 - L2 LINE L2 -965 2349 2219 412 248 69 41 chr10 22954046 22954224 -122635064 - MIR SINE MIR -63 145 17 2203 113 0 7 chr10 22954799 22955109 -122634179 + AluSg SINE Alu 3 310 0 1327 101 0 0 chr10 22955674 22955842 -122633446 + AluSq SINE Alu 1 168 -145 950 142 0 17 chr10 22955862 22956038 -122633250 + (GGAGAA)n Simple_repeat Simple_repeat 3 175 0 438 232 0 0 chr10 22956051 22956163 -122633125 + GA-rich Low_complexity Low_complexity 49 160 0 2160 110 0 17 chr10 22956568 22956869 -122632419 - AluSx SINE Alu -16 296 1 2131 131 3 0 chr10 22958448 22958746 -122630542 + AluSx SINE Alu 1 299 -13 23 33 0 0 chr10 22959151 22959181 -122630107 + AT_rich Low_complexity Low_complexity 1 30 0 204 240 0 0 chr10 22959548 22959598 -122629690 + (TA)n Simple_repeat Simple_repeat 2 51 0 486 156 3 75 chr10 22959660 22959781 -122629507 - L1MD3 LINE L1 -13 7982 7655 1674 115 11 19 chr10 22962976 22963236 -122626052 + AluSq SINE Alu 1 258 -55 2128 245 199 92 chr10 22963554 22964597 -122624691 - L2 LINE L2 -1090 2224 885 715 162 0 0 chr10 22964597 22964708 -122624580 + FLAM_C SINE Alu 1 111 -32 2128 245 199 92 chr10 22964708 22964997 -122624291 - L2 LINE L2 -2429 885 628 1425 196 49 28 chr10 22965000 22965326 -122623962 - MER58B DNA MER1_type -1 340 8 1159 276 138 21 chr10 22965337 22965851 -122623437 - L2 LINE L2 -2736 578 5 493 84 0 0 chr10 22966021 22966092 -122623196 - L1MA4 LINE L1 -9 6291 6221 2274 111 0 3 chr10 22966817 22967123 -122622165 + AluSx SINE Alu 2 306 -6 1611 229 88 27 chr10 22967842 22968353 -122620935 - L1ME1 LINE L1 -21 6145 5604 2086 105 3 10 chr10 22968376 22968672 -122620616 - AluY SINE Alu -17 294 1 655 182 120 47 chr10 22968673 22968931 -122620357 - L1ME1 LINE L1 -752 5394 5118 2088 118 10 0 chr10 22969219 22969515 -122619773 - AluSq SINE Alu -14 299 1 300 230 0 0 chr10 22969618 22969692 -122619596 - L1MCa LINE L1 -1791 4635 4562 1495 157 57 21 chr10 22969694 22969974 -122619314 - AluJb SINE Alu -22 290 1 2098 235 81 35 chr10 22970139 22970183 -122619105 - L1MCa LINE L1 -3039 3387 3346 2173 113 3 0 chr10 22970183 22970485 -122618803 + AluSx SINE Alu 1 303 -9 1796 112 15 4 chr10 22970485 22970742 -122618546 + AluSq SINE Alu 44 305 -8 2098 235 81 35 chr10 22970742 22971487 -122617801 - L1MCa LINE L1 -3080 3346 2529 731 126 0 0 chr10 22971487 22971590 -122617698 - U6 snRNA snRNA -4 103 1 2098 235 81 35 chr10 22971590 22971865 -122617423 - L1MCa LINE L1 -3897 2529 2268 * 4906 212 74 24 chr10 22971856 22973205 -122616083 - L1MCa LINE L1 -4815 1611 195 1375 112 0 0 chr10 22973216 22973403 -122615885 - AluSp SINE Alu -4 309 123 2026 113 10 10 chr10 22973408 22973701 -122615587 - AluY SINE Alu -5 306 14 480 220 60 27 chr10 22973701 22973851 -122615437 - L1MCa LINE L1 -6252 174 20 902 184 126 95 chr10 22973852 22974155 -122615133 - L1MEc LINE L1 -3118 3097 2774 1756 85 89 26 chr10 22974155 22974426 -122614862 - AluSc SINE Alu -4 305 18 902 184 126 95 chr10 22974426 22974583 -122614705 - L1MEc LINE L1 -3441 2774 2623 992 220 55 124 chr10 22974637 22974782 -122614506 - L1MEc LINE L1 -3900 2496 2343 2280 125 0 0 chr10 22974782 22975094 -122614194 - AluSx SINE Alu 0 312 1 992 220 55 124 chr10 22975094 22975120 -122614168 - L1MEc LINE L1 -4053 2343 2317 1980 136 3 13 chr10 22975120 22975436 -122613852 - AluSp SINE Alu 0 313 1 992 220 55 124 chr10 22975436 22975593 -122613695 - L1MEc LINE L1 -4079 2317 2151 1402 157 114 0 chr10 22975593 22975848 -122613440 - AluSx SINE Alu -28 284 1 992 220 55 124 chr10 22975848 22976231 -122613057 - L1MEc LINE L1 -4245 2151 1833 2212 104 3 3 chr10 22976231 22976539 -122612749 + AluSc SINE Alu 1 308 -1 992 220 55 124 chr10 22976539 22976566 -122612722 - L1MEc LINE L1 -4563 1833 1806 610 203 112 21 chr10 22976587 22976730 -122612558 + Tigger7 DNA MER2_type 4 159 -2328 568 272 61 78 chr10 22976745 22977369 -122611919 - L1MEc LINE L1 -4581 1815 1203 23 0 0 0 chr10 22977485 22977508 -122611780 + AT_rich Low_complexity Low_complexity 1 23 0 259 214 38 145 chr10 22979364 22979495 -122609793 - L2 LINE L2 0 3313 3197 1957 120 32 0 chr10 22980880 22981163 -122608125 - AluSx SINE Alu -18 294 3 1380 161 42 110 chr10 22981222 22981356 -122607932 + AluJb SINE Alu 1 143 -169 1775 170 11 0 chr10 22981356 22981633 -122607655 + AluJb SINE Alu 3 282 -30 1380 161 42 110 chr10 22981633 22981833 -122607455 + AluJb SINE Alu 143 312 0 378 0 0 0 chr10 22982017 22982059 -122607229 + (TG)n Simple_repeat Simple_repeat 2 43 0 713 168 10 149 chr10 22982060 22982268 -122607020 - AluY SINE Alu -26 285 107 1391 98 0 5 chr10 22982269 22982453 -122606835 - AluSg SINE Alu -127 183 1 198 0 0 0 chr10 22983167 22983189 -122606099 + (T)n Simple_repeat Simple_repeat 1 22 0 198 103 0 0 chr10 22984812 22984841 -122604447 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 182 268 36 0 chr10 22984841 22984897 -122604391 - L2 LINE L2 -300 2972 2915 * 358 242 248 0 chr10 22984892 22985041 -122604247 - MIR SINE MIR 0 262 77 617 281 26 70 chr10 22985101 22985329 -122603959 - MER20 DNA MER1_type 0 219 2 2124 82 43 3 chr10 22985996 22986278 -122603010 + AluY SINE Alu 1 293 -18 2418 90 0 0 chr10 22986287 22986599 -122602689 + AluSx SINE Alu 1 312 0 232 255 0 0 chr10 22986827 22986878 -122602410 - MIR SINE MIR -19 243 193 1746 166 29 26 chr10 22987228 22987571 -122601717 + MER2 DNA MER2_type 1 344 0 410 264 41 8 chr10 22987707 22987828 -122601460 + L2 LINE L2 3148 3272 0 1989 131 0 3 chr10 22987944 22988251 -122601037 - AluSc SINE Alu 0 306 1 848 72 88 0 chr10 22989335 22989460 -122599828 + MER85 DNA T2_type 1 136 -3 997 151 42 26 chr10 22989534 22989726 -122599562 - MER46A DNA MER2_type 0 236 42 2081 117 33 0 chr10 22990050 22990349 -122598939 - AluSx SINE Alu -3 309 1 1992 113 58 0 chr10 22990544 22990818 -122598470 + AluSx SINE Alu 7 296 -16 212 264 138 11 chr10 22991208 22991295 -122597993 - MIR SINE MIR -161 101 4 820 163 65 0 chr10 22993596 22993749 -122595539 - AluSq SINE Alu -14 299 137 955 175 0 48 chr10 22993838 22994027 -122595261 - FRAM SINE Alu 0 176 1 238 281 55 85 chr10 22994097 22994332 -122594956 + L2 LINE L2 2149 2376 -938 2215 95 0 24 chr10 22995196 22995490 -122593798 - AluSx SINE Alu -25 287 1 24 67 0 0 chr10 22996241 22996286 -122593002 + AT_rich Low_complexity Low_complexity 1 45 0 1965 135 3 3 chr10 22996549 22996852 -122592436 + AluSx SINE Alu 1 303 0 553 155 9 9 chr10 22999395 22999511 -122589777 + (TA)n Simple_repeat Simple_repeat 2 117 0 228 391 71 18 chr10 22999565 22999790 -122589498 - L2 LINE L2 -527 2787 2551 26 64 0 0 chr10 23000222 23000269 -122589019 + AT_rich Low_complexity Low_complexity 1 47 0 184 326 0 0 chr10 23000692 23000741 -122588547 + L2 LINE L2 2581 2629 -685 1827 147 3 29 chr10 23001733 23002040 -122587248 + AluSx SINE Alu 3 301 -11 252 0 0 0 chr10 23002170 23002198 -122587090 + (TTA)n Simple_repeat Simple_repeat 2 29 0 687 161 0 0 chr10 23002206 23002318 -122586970 - FLAM_C SINE Alu -31 112 1 1662 170 13 27 chr10 23002335 23002635 -122586653 - AluJo SINE Alu -16 296 1 578 307 31 21 chr10 23003461 23003787 -122585501 - L1MEd LINE L1 -4869 1250 922 293 193 0 0 chr10 23003890 23003947 -122585341 - L1MC4 LINE L1 0 8042 7986 784 239 56 0 chr10 23003948 23004145 -122585143 - L1MC4 LINE L1 -140 7902 7695 364 259 9 9 chr10 23004265 23004373 -122584915 - L1MC4 LINE L1 -697 7345 7238 779 172 89 6 chr10 23004374 23004543 -122584745 - L1MC4 LINE L1 -970 7072 6890 828 181 39 44 chr10 23004552 23004734 -122584554 - MLT1E2 LTR MaLR -3 623 443 517 192 32 16 chr10 23004744 23004869 -122584419 - MLT1E2 LTR MaLR -293 333 207 1318 133 133 8 chr10 23004907 23005147 -122584141 - AluSx SINE Alu -2 310 41 352 267 188 34 chr10 23005152 23005328 -122583960 - MLT1E2 LTR MaLR -420 204 2 253 236 81 34 chr10 23005412 23005560 -122583728 - L1MEd LINE L1 -5284 835 681 653 259 125 102 chr10 23005565 23005997 -122583291 - L1MEd LINE L1 -5473 646 205 27 29 0 0 chr10 23006037 23006071 -122583217 + AT_rich Low_complexity Low_complexity 1 34 0 329 73 0 0 chr10 23006168 23006209 -122583079 - MER4E LTR ERV1 -73 693 653 279 292 0 0 chr10 23006210 23006282 -122583006 - L1MEd LINE L1 -6046 73 2 298 258 72 0 chr10 23006319 23006416 -122582872 + L2 LINE L2 1868 1971 -1343 713 312 36 24 chr10 23006631 23006878 -122582410 + L2 LINE L2 2598 2847 -467 225 254 0 30 chr10 23006891 23006958 -122582330 - LTR67 LTR ERVL -3 554 490 2213 110 3 0 chr10 23007033 23007334 -122581954 + AluSq SINE Alu 1 302 -11 10747 179 55 43 chr10 23007771 23008716 -122580572 - L1M2 LINE L1 -2 7003 6070 2245 114 0 0 chr10 23008716 23009022 -122580266 - AluSx SINE Alu -5 307 2 10747 179 55 43 chr10 23009022 23011448 -122577840 - L1M2 LINE L1 -935 6070 3674 1927 136 3 11 chr10 23011448 23011734 -122577554 - AluSx SINE Alu -26 286 3 252 77 0 0 chr10 23011744 23011783 -122577505 + (TCTCG)n Simple_repeat Simple_repeat 2 40 0 2175 118 0 0 chr10 23011785 23012072 -122577216 - AluSc SINE Alu -22 287 1 10747 179 55 43 chr10 23012072 23013398 -122575890 - L1M2 LINE L1 -3339 3666 2357 2322 96 0 3 chr10 23013398 23013691 -122575597 - AluSg SINE Alu -18 292 1 10747 179 55 43 chr10 23013691 23013857 -122575431 - L1M2 LINE L1 -4648 2357 2194 1763 167 43 0 chr10 23013857 23014156 -122575132 - AluSx SINE Alu 0 312 1 10747 179 55 43 chr10 23014156 23014177 -122575111 - L1M2 LINE L1 -4811 2194 2175 261 0 0 0 chr10 23014177 23014206 -122575082 + (TC)n Simple_repeat Simple_repeat 2 30 0 234 0 0 0 chr10 23014205 23014231 -122575057 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 10747 179 55 43 chr10 23014206 23014565 -122574723 - L1M2 LINE L1 -4830 2175 1592 923 185 0 123 chr10 23014669 23014945 -122574343 + AluJb SINE Alu 69 310 -2 509 271 73 18 chr10 23015806 23016024 -122573264 + MIR SINE MIR 3 232 -30 21 71 0 0 chr10 23016244 23016286 -122573002 + AT_rich Low_complexity Low_complexity 1 42 0 222 265 130 60 chr10 23020161 23020539 -122568749 - L2 LINE L2 -174 3139 2736 259 280 51 57 chr10 23020692 23020867 -122568421 - L2 LINE L2 -566 2748 2575 1142 134 12 0 chr10 23020912 23021084 -122568204 - AluSg/x SINE Alu -25 287 114 5756 243 89 16 chr10 23021217 23022678 -122566610 - L1M2 LINE L1 -5279 1570 3 277 260 0 0 chr10 23022764 23022814 -122566474 + L1M2 LINE L1 844 893 -5956 265 313 31 0 chr10 23022842 23022938 -122566350 - MIR SINE MIR -75 187 89 269 310 103 7 chr10 23023357 23023512 -122565776 + L2 LINE L2 1962 2131 -1183 407 328 112 40 chr10 23023552 23023669 -122565619 + L2 LINE L2 2383 2490 -824 2689 30 3 0 chr10 23023669 23023970 -122565318 - AluY SINE Alu -9 302 1 407 328 112 40 chr10 23023970 23024297 -122564991 + L2 LINE L2 2490 2859 -455 224 280 119 21 chr10 23024506 23024649 -122564639 + L2 LINE L2 3152 3308 -5 215 125 25 0 chr10 23024649 23024689 -122564599 + GA-rich Low_complexity Low_complexity 4 44 0 492 266 90 41 chr10 23025370 23025615 -122563673 - MIR SINE MIR -5 257 3 2256 103 23 0 chr10 23025709 23026009 -122563279 - AluSx SINE Alu -5 307 1 1649 145 52 45 chr10 23026211 23026521 -122562767 - AluJb SINE Alu 0 312 1 485 288 103 52 chr10 23026874 23027145 -122562143 - MER102a DNA MER1_type 0 330 46 189 321 88 15 chr10 23027189 23027326 -122561962 + L2 LINE L2 2221 2367 -947 280 314 102 0 chr10 23027360 23027478 -122561810 + MIR SINE MIR 49 178 -84 2211 113 3 0 chr10 23027766 23028057 -122561231 + AluSx SINE Alu 1 292 -20 1617 152 18 73 chr10 23028066 23028394 -122560894 + AluJo SINE Alu 1 310 -2 293 290 109 77 chr10 23028448 23028669 -122560619 + L2 LINE L2 3045 3272 0 186 43 0 0 chr10 23028826 23028849 -122560439 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1084 197 10 25 chr10 23028853 23029051 -122560237 - AluJo SINE Alu -31 281 87 1157 178 53 0 chr10 23029254 23029462 -122559826 - MER20 DNA MER1_type 0 219 1 377 183 49 24 chr10 23029838 23029920 -122559368 - AluS SINE Alu -218 84 1 585 296 246 14 chr10 23029923 23030419 -122558869 - L2 LINE L2 -778 2536 1926 514 183 0 0 chr10 23030419 23030512 -122558776 + AluJb SINE Alu 136 228 -84 272 286 118 35 chr10 23030567 23030822 -122558466 - L2 LINE L2 -1433 1881 1606 241 251 182 5 chr10 23030838 23031025 -122558263 - L2 LINE L2 -1811 1503 1284 2252 89 3 3 chr10 23031326 23031618 -122557670 + AluSg SINE Alu 1 292 -18 1465 211 145 15 chr10 23031967 23032435 -122556853 + L2 LINE L2 1900 2428 -886 242 270 71 86 chr10 23032554 23032936 -122556352 + L2 LINE L2 2854 3294 -19 22 0 0 0 chr10 23036737 23036759 -122552529 + AT_rich Low_complexity Low_complexity 1 22 0 294 219 67 46 chr10 23037384 23037510 -122551778 + MER5B DNA MER1_type 15 168 -21 981 137 0 0 chr10 23038173 23038319 -122550969 - FRAM SINE Alu -31 145 1 2289 90 13 0 chr10 23038940 23039240 -122550048 - AluSx SINE Alu -8 304 1 784 245 66 10 chr10 23039679 23039875 -122549413 + AluJo SINE Alu 86 292 -20 2214 105 18 0 chr10 23039894 23040179 -122549109 + AluSp SINE Alu 1 290 -23 241 324 37 0 chr10 23040561 23040669 -122548619 - MIR SINE MIR -32 230 119 713 177 51 19 chr10 23041962 23042120 -122547168 + AluJo SINE Alu 122 284 -28 252 213 33 0 chr10 23042136 23042197 -122547091 - MLT1A1 LTR MaLR -28 337 275 624 189 8 23 chr10 23042254 23042386 -122546902 - MLT1A1 LTR MaLR -235 130 1 1516 149 75 26 chr10 23042835 23043103 -122546185 - AluJo SINE Alu -31 281 1 261 0 0 0 chr10 23044305 23044334 -122544954 + (CAA)n Simple_repeat Simple_repeat 2 30 0 2723 54 148 8 chr10 23044712 23045104 -122544184 - LTR7 LTR ERV1 -3 447 1 186 71 0 0 chr10 23045219 23045247 -122544041 + (CGGGGG)n Simple_repeat Simple_repeat 4 31 0 184 265 60 36 chr10 23046051 23046134 -122543154 - MIR SINE MIR -61 147 63 413 250 36 42 chr10 23046506 23046674 -122542614 - MIR SINE MIR -35 227 61 332 288 18 9 chr10 23046861 23046972 -122542316 + MARNA DNA Mariner 317 428 -158 1273 152 9 18 chr10 23047157 23047381 -122541907 + AluJo SINE Alu 82 303 -9 1591 155 59 35 chr10 23048505 23048726 -122540562 + MER46B DNA MER2_type 1 109 -2622 2146 120 0 0 chr10 23048726 23049018 -122540270 + AluSx SINE Alu 19 310 -2 1591 155 59 35 chr10 23049018 23049137 -122540151 + MER46B DNA MER2_type 109 224 -12 26 0 0 0 chr10 23050128 23050154 -122539134 + AT_rich Low_complexity Low_complexity 1 26 0 268 294 34 50 chr10 23053277 23053396 -122535892 - MIR SINE MIR -37 225 109 987 181 0 0 chr10 23053708 23053863 -122535425 + FRAM SINE Alu 1 151 -25 358 339 11 0 chr10 23054025 23054163 -122535125 + L1MC4a LINE L1 5421 5562 -605 599 106 80 53 chr10 23054205 23054318 -122534970 + MER3 DNA MER1_type 94 209 0 338 143 0 0 chr10 23054275 23054324 -122534964 - MER3 DNA MER1_type -119 90 42 * 332 286 38 15 chr10 23054324 23054457 -122534831 + L1MC4a LINE L1 5560 5695 -426 1873 152 0 13 chr10 23054469 23054772 -122534516 + AluSx SINE Alu 1 299 -13 2211 86 31 3 chr10 23054852 23055143 -122534145 + AluSx SINE Alu 1 299 -13 24 0 0 0 chr10 23055148 23055172 -122534116 + AT_rich Low_complexity Low_complexity 1 24 0 1901 108 9 93 chr10 23055480 23055812 -122533476 - AluSx SINE Alu -8 304 1 554 277 185 20 chr10 23055889 23056192 -122533096 - Charlie7 DNA MER1_type -243 2369 2017 1061 136 0 7 chr10 23056195 23056349 -122532939 - FRAM SINE Alu -23 153 1 667 194 147 54 chr10 23056351 23056506 -122532782 - Charlie7 DNA MER1_type -603 2009 1870 2205 107 7 3 chr10 23056506 23056806 -122532482 - AluSx SINE Alu -11 301 1 667 194 147 54 chr10 23056806 23056908 -122532380 - Charlie7 DNA MER1_type -742 1870 1728 356 273 29 29 chr10 23057179 23057318 -122531970 - Charlie7 DNA MER1_type -972 1640 1502 582 301 91 46 chr10 23057340 23057669 -122531619 - Charlie7 DNA MER1_type -2266 346 3 410 181 17 36 chr10 23057678 23057816 -122531472 + L1MC4a LINE L1 5716 5819 -302 262 223 177 29 chr10 23057824 23057999 -122531289 + L1ME4a LINE L1 5894 6094 -27 787 132 15 37 chr10 23058804 23058940 -122530348 - FLAM_A SINE Alu 0 133 1 2144 110 3 0 chr10 23059140 23059432 -122529856 + AluSg SINE Alu 1 293 -17 295 357 32 0 chr10 23059982 23060139 -122529149 - MIR3 SINE MIR -11 197 36 325 43 43 0 chr10 23060186 23060233 -122529055 - L1PA6 LINE L1 0 6154 6106 2175 123 3 0 chr10 23060264 23060566 -122528722 + AluSx SINE Alu 1 303 -9 690 179 0 86 chr10 23061011 23061162 -122528126 - FLAM_A SINE Alu -4 138 1 812 191 23 74 chr10 23061166 23061289 -122527999 - L1ME2 LINE L1 0 6164 6055 2138 133 3 0 chr10 23061289 23061583 -122527705 + AluSx SINE Alu 1 295 -17 812 191 23 74 chr10 23061583 23061674 -122527614 - L1ME2 LINE L1 -109 6055 5961 298 328 118 9 chr10 23061921 23062150 -122527138 + MIR SINE MIR 8 261 -1 204 256 0 49 chr10 23062235 23062317 -122526971 + L2 LINE L2 1358 1435 -1879 236 320 126 26 chr10 23062574 23062843 -122526445 + L2 LINE L2 2009 2304 -1010 567 292 129 10 chr10 23062887 23063096 -122526192 - MIR SINE MIR -24 238 5 2240 85 3 3 chr10 23063254 23063561 -122525727 - AluSp SINE Alu 0 307 1 1408 180 0 78 chr10 23063818 23063961 -122525327 - L1M LINE L1 -743 5403 5250 2370 102 0 3 chr10 23063961 23064274 -122525014 - AluSx SINE Alu 0 312 1 1408 180 0 78 chr10 23064274 23064520 -122524768 - L1M LINE L1 -896 5250 5058 2350 213 57 6 chr10 23064542 23065080 -122524208 - L1M4 LINE L1 -1657 4489 3909 2120 116 3 0 chr10 23065080 23065373 -122523915 - AluSx SINE Alu -18 294 1 2350 213 57 6 chr10 23065373 23065502 -122523786 - L1M4 LINE L1 -2237 3909 3788 756 198 56 6 chr10 23065510 23065672 -122523616 - FRAM SINE Alu -7 169 1 2924 222 58 33 chr10 23065672 23066321 -122522967 - L1M4 LINE L1 -2352 3794 3163 2263 137 89 5 chr10 23066321 23066716 -122522572 - MSTA LTR MaLR 0 428 1 2924 222 58 33 chr10 23066716 23067392 -122521896 - L1M4 LINE L1 -2983 3163 2362 2801 0 0 0 chr10 23067435 23067735 -122521553 + AluYa5 SINE Alu 1 300 -11 2142 78 0 11 chr10 23068082 23068352 -122520936 - AluY SINE Alu -44 267 1 225 0 0 0 chr10 23068907 23068932 -122520356 + (T)n Simple_repeat Simple_repeat 1 25 0 358 274 32 0 chr10 23069776 23069871 -122519417 + L3 LINE CR1 1307 1404 -173 199 258 202 45 chr10 23071281 23071370 -122517918 + MIR SINE MIR 37 139 -69 230 278 116 46 chr10 23071443 23071481 -122517807 - MIR3 SINE MIR -63 145 111 2200 115 0 20 chr10 23071481 23071785 -122517503 + AluSx SINE Alu 1 298 -14 230 278 116 46 chr10 23071785 23071920 -122517368 - MIR3 SINE MIR -97 111 3 39762 60 4 4 chr10 23072185 23075016 -122514272 + L1PA5 LINE L1 2 2832 -3322 2580 43 7 0 chr10 23075016 23075318 -122513970 + AluY SINE Alu 2 305 -6 39762 60 4 4 chr10 23075318 23078639 -122510649 + L1PA5 LINE L1 2831 6154 0 218 338 0 13 chr10 23079334 23079411 -122509877 + GA-rich Low_complexity Low_complexity 4 79 0 333 0 0 0 chr10 23080003 23080040 -122509248 + (TA)n Simple_repeat Simple_repeat 1 37 0 * 351 0 0 0 chr10 23080039 23080078 -122509210 + (GA)n Simple_repeat Simple_repeat 2 40 0 1734 106 57 19 chr10 23080079 23080344 -122508944 - AluSx SINE Alu -35 277 3 2221 125 0 0 chr10 23080621 23080917 -122508371 + AluSx SINE Alu 1 296 -16 333 185 11 22 chr10 23080917 23081009 -122508279 + GA-rich Low_complexity Low_complexity 1 91 0 11054 207 97 37 chr10 23081029 23083303 -122505985 + L1MB8 LINE L1 5 2139 -5043 2198 136 0 0 chr10 23083303 23083613 -122505675 + AluSx SINE Alu 1 310 -2 11054 207 97 37 chr10 23083613 23086050 -122503238 + L1MB8 LINE L1 2139 4426 -2756 2145 119 0 7 chr10 23086050 23086353 -122502935 + AluSx SINE Alu 1 301 -11 11054 207 97 37 chr10 23086353 23086601 -122502687 + L1MB8 LINE L1 4426 4657 -2525 2024 126 11 0 chr10 23086601 23086879 -122502409 + AluSx SINE Alu 3 283 -29 11054 207 97 37 chr10 23086879 23087239 -122502049 + L1MB8 LINE L1 4657 4994 -2188 1669 174 0 24 chr10 23087239 23087526 -122501762 + AluJb SINE Alu 1 280 -32 192 97 0 0 chr10 23087529 23087560 -122501728 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 1761 178 31 3 chr10 23087568 23087861 -122501427 + AluJo SINE Alu 1 301 -11 11054 207 97 37 chr10 23087861 23088422 -122500866 + L1MB8 LINE L1 5001 5526 -1656 1328 187 0 0 chr10 23088422 23088657 -122500631 - MER46A DNA MER2_type 0 236 2 11054 207 97 37 chr10 23088657 23088781 -122500507 + L1MB8 LINE L1 5526 6418 -764 767 212 53 12 chr10 23088773 23089018 -122500270 + L1MB8 LINE L1 6715 6969 -230 * 430 208 148 38 chr10 23089046 23089282 -122500006 + L1MB8 LINE L1 6917 7178 -21 * 4571 170 18 18 chr10 23089226 23089546 -122499742 - L1MB1 LINE L1 -22 6146 5827 2474 84 0 0 chr10 23089546 23089845 -122499443 - AluSx SINE Alu -13 299 1 4571 170 18 18 chr10 23089845 23091057 -122498231 - L1MB1 LINE L1 -341 5827 4618 24 32 0 0 chr10 23091059 23091090 -122498198 + AT_rich Low_complexity Low_complexity 1 31 0 1918 180 35 33 chr10 23091098 23091493 -122497795 + MSTD LTR MaLR 1 396 0 1217 274 74 6 chr10 23091744 23092306 -122496982 + L2 LINE L2 2535 3143 -170 242 320 124 7 chr10 23092465 23092618 -122496670 - MLT1J LTR MaLR -323 188 18 1696 191 3 16 chr10 23092864 23093178 -122496110 - AluJb SINE Alu -2 310 1 363 287 227 0 chr10 23093295 23093595 -122495693 - HAL1 LINE L1 -735 1772 1405 416 279 84 67 chr10 23093837 23094242 -122495046 + L1ME4a LINE L1 5477 5888 -233 340 297 99 42 chr10 23094540 23094732 -122494556 + MIR SINE MIR 19 221 -41 5658 89 49 8 chr10 23094807 23095706 -122493582 + L1PA14 LINE L1 5207 6143 -18 462 36 0 0 chr10 23097165 23097221 -122492067 + (TG)n Simple_repeat Simple_repeat 1 56 0 206 118 0 0 chr10 23097439 23097473 -122491815 + (A)n Simple_repeat Simple_repeat 1 34 0 192 40 0 0 chr10 23098420 23098445 -122490843 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 317 171 129 0 chr10 23098454 23098524 -122490764 + Tigger4(Zombi) DNA MER2_type 1 79 -2652 237 200 0 100 chr10 23098852 23098912 -122490376 - L2 LINE L2 -9 3263 3210 333 0 0 0 chr10 23099015 23099052 -122490236 + (CA)n Simple_repeat Simple_repeat 2 38 0 21 0 0 0 chr10 23100229 23100250 -122489038 + AT_rich Low_complexity Low_complexity 1 21 0 203 191 0 24 chr10 23100708 23100750 -122488538 + GA-rich Low_complexity Low_complexity 4 44 0 22 0 0 0 chr10 23101957 23101979 -122487309 + AT_rich Low_complexity Low_complexity 1 22 0 27 0 0 0 chr10 23102051 23102078 -122487210 + AT_rich Low_complexity Low_complexity 1 27 0 21 0 0 0 chr10 23102822 23102843 -122486445 + AT_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr10 23102948 23102975 -122486313 + AT_rich Low_complexity Low_complexity 1 27 0 233 154 122 0 chr10 23103085 23103208 -122486080 + (TA)n Simple_repeat Simple_repeat 2 139 0 778 188 45 122 chr10 23103448 23103735 -122485553 - MLT1B LTR MaLR -125 265 1 3949 202 65 10 chr10 23103807 23104722 -122484566 + HERVL74 LTR ERVL 1134 2098 -3587 881 222 19 5 chr10 23104866 23105078 -122484210 + HERVL74 LTR ERVL 2261 2475 -1081 329 258 33 8 chr10 23105129 23105249 -122484039 + L1M4 LINE L1 5140 5262 -884 * 1688 216 40 47 chr10 23105244 23105636 -122483652 - L1ME LINE L1 -381 5783 5399 2332 108 0 0 chr10 23105636 23105932 -122483356 - AluSg SINE Alu -14 296 1 1688 216 40 47 chr10 23105932 23106122 -122483166 - L1ME LINE L1 -765 5399 5209 732 175 100 38 chr10 23106130 23106290 -122482998 - FRAM SINE Alu -5 171 2 349 252 56 0 chr10 23106320 23106427 -122482861 - L1MD3 LINE L1 -14 7981 7869 748 244 0 0 chr10 23106434 23106590 -122482698 + MLT1F LTR MaLR 7 162 -380 312 27 0 0 chr10 23106592 23106629 -122482659 + (CA)n Simple_repeat Simple_repeat 2 38 0 319 179 0 0 chr10 23106634 23106690 -122482598 - L1MC4 LINE L1 -1339 6703 6648 618 14 0 0 chr10 23106726 23106797 -122482491 + (TC)n Simple_repeat Simple_repeat 2 72 0 228 67 0 0 chr10 23106796 23106826 -122482462 + (TA)n Simple_repeat Simple_repeat 1 30 0 * 406 198 0 22 chr10 23106826 23106917 -122482371 + MLT1F LTR MaLR 165 253 -289 2290 57 30 30 chr10 23106967 23107263 -122482025 - AluY SINE Alu -15 296 1 1398 198 52 27 chr10 23107295 23107623 -122481665 + LTR40b LTR ERVL 127 462 0 1441 263 50 64 chr10 23107624 23108202 -122481086 + HERVL40 LTR ERVL 1 570 -4960 597 237 19 121 chr10 23108253 23108510 -122480778 + HERVL40 LTR ERVL 597 827 -4703 186 158 84 116 chr10 23108510 23108605 -122480683 - MIR SINE MIR -121 141 50 520 255 106 34 chr10 23108610 23108818 -122480470 + HERVL40 LTR ERVL 937 1159 -4371 465 197 8 63 chr10 23108992 23109119 -122480169 + LTR40b LTR ERVL 289 408 -54 548 178 30 30 chr10 23109166 23109301 -122479987 - L1ME LINE L1 -942 5204 5070 2279 73 11 0 chr10 23109323 23109610 -122479678 - AluSq SINE Alu -14 299 10 2287 50 0 21 chr10 23109710 23109990 -122479298 + AluY SINE Alu 32 305 -6 7338 87 22 20 chr10 23110467 23111535 -122477753 + MER11C LTR ERVK 1 1071 0 2107 106 3 10 chr10 23111927 23112219 -122477069 + AluSc SINE Alu 1 290 -19 2303 114 0 0 chr10 23112454 23112760 -122476528 + AluSx SINE Alu 1 306 -6 2173 155 85 19 chr10 23112761 23113244 -122476044 - L1MB8 LINE L1 -24 6154 5640 3727 166 65 55 chr10 23113244 23114147 -122475141 - MER21A LTR ERV1 -6 925 14 214 356 148 15 chr10 23114181 23114316 -122474972 + L2 LINE L2 3116 3268 -4 262 352 14 35 chr10 23114949 23114971 -122474317 - MIR3 SINE MIR -18 190 169 1997 106 29 0 chr10 23114971 23115298 -122473990 + AluSx SINE Alu 1 335 0 262 352 14 35 chr10 23115298 23115416 -122473872 - MIR3 SINE MIR -39 169 52 1484 119 22 9 chr10 23116444 23116670 -122472618 + MER30 DNA MER1_type 1 229 -1 277 158 35 35 chr10 23116827 23116884 -122472404 + L2 LINE L2 3214 3270 -2 3435 197 69 53 chr10 23117518 23117568 -122471720 - L1MB4 LINE L1 0 6180 6132 2096 137 0 9 chr10 23117568 23117883 -122471405 - AluSq SINE Alu -1 312 1 3435 197 69 53 chr10 23117883 23118772 -122470516 - L1MB4 LINE L1 -48 6132 5259 2083 117 3 3 chr10 23118772 23119062 -122470226 + AluSq SINE Alu 12 301 -12 3435 197 69 53 chr10 23119062 23119135 -122470153 - L1MB4 LINE L1 -921 5259 5189 866 165 0 0 chr10 23119135 23119262 -122470026 - FLAM_C SINE Alu -6 127 1 3435 197 69 53 chr10 23119262 23119957 -122469331 - L1MB4 LINE L1 -991 5189 4451 239 287 0 69 chr10 23120092 23120193 -122469095 - L1ME LINE L1 -285 5885 5792 1633 208 112 7 chr10 23120193 23120611 -122468677 - MLT1C LTR MaLR 0 467 6 557 259 77 33 chr10 23120631 23120905 -122468383 - L1ME LINE L1 -342 5779 5494 264 298 21 0 chr10 23121071 23121165 -122468123 - MIR SINE MIR -98 164 69 584 199 23 23 chr10 23121356 23121527 -122467761 - L1MC5 LINE L1 -39 7922 7752 238 341 0 8 chr10 23121563 23121689 -122467599 - L1MB4 LINE L1 -2409 3737 3613 1935 130 7 20 chr10 23121842 23122004 -122467284 - AluSx SINE Alu -16 296 138 2344 79 3 25 chr10 23122004 23122321 -122466967 - AluY SINE Alu 0 311 2 1935 130 7 20 chr10 23122321 23122458 -122466830 - AluSx SINE Alu -174 138 1 315 289 58 8 chr10 23122458 23122689 -122466599 - L1MEc LINE L1 -3861 2354 2150 434 330 107 12 chr10 23123045 23123623 -122465665 - HAL1 LINE L1 -785 1722 1090 329 280 79 37 chr10 23123685 23123874 -122465414 - L1MEc LINE L1 -5193 1012 816 313 282 161 0 chr10 23124043 23124167 -122465121 - L1MEc LINE L1 -5734 471 328 2444 83 0 0 chr10 23124315 23124615 -122464673 + AluY SINE Alu 1 300 -11 392 340 104 24 chr10 23125130 23125551 -122463737 + L2 LINE L2 2201 2655 -659 2078 134 0 3 chr10 23125996 23126302 -122462986 + AluSg SINE Alu 1 305 -5 949 265 43 4 chr10 23126307 23126541 -122462747 + MIR SINE MIR 20 262 0 2437 79 0 0 chr10 23126789 23127094 -122462194 + AluY SINE Alu 1 305 -6 41902 39 2 6 chr10 23127142 23129691 -122459597 + L1PA4 LINE L1 2 2561 -3594 6100 65 14 46 chr10 23129691 23131449 -122457839 + SVA Other Other 3 1385 -1 41902 39 2 6 chr10 23131449 23135071 -122454217 + L1PA4 LINE L1 2561 6155 0 185 298 0 0 chr10 23135132 23135179 -122454109 - L2 LINE L2 -705 2609 2563 207 311 132 33 chr10 23135306 23135518 -122453770 - L2 LINE L2 -932 2382 2150 415 226 83 45 chr10 23135668 23135801 -122453487 + L2 LINE L2 3175 3312 -1 2243 110 3 0 chr10 23136199 23136498 -122452790 - AluY SINE Alu -11 300 1 1841 142 3 42 chr10 23136549 23136665 -122452623 - AluSx SINE Alu -15 297 178 2244 152 22 0 chr10 23136665 23137021 -122452267 + THE1B LTR MaLR 1 364 0 1841 142 3 42 chr10 23137021 23137213 -122452075 - AluSx SINE Alu -134 178 1 1458 168 24 38 chr10 23137559 23137851 -122451437 + AluJb SINE Alu 1 288 -24 2042 104 57 0 chr10 23138163 23138443 -122450845 - AluSg SINE Alu -14 296 1 269 253 6 133 chr10 23138912 23139078 -122450210 + MIR SINE MIR 118 262 0 252 165 237 62 chr10 23139520 23139617 -122449671 - MIR SINE MIR -28 234 121 5314 149 34 26 chr10 23140108 23141355 -122447933 - L1MA4 LINE L1 0 6300 5048 1888 222 73 19 chr10 23141356 23141814 -122447474 + L1MB5 LINE L1 2551 3061 -3085 2323 112 0 10 chr10 23141814 23142126 -122447162 + AluSx SINE Alu 1 309 -3 1888 222 73 19 chr10 23142126 23142361 -122446927 + L1MB5 LINE L1 3061 3282 -2864 5692 199 48 39 chr10 23142361 23144579 -122444709 + L1MB5 LINE L1 3578 5776 -398 2504 71 3 0 chr10 23144579 23144889 -122444399 + AluY SINE Alu 1 311 0 378 0 0 0 chr10 23144899 23144941 -122444347 + (CA)n Simple_repeat Simple_repeat 2 43 0 5692 199 48 39 chr10 23144941 23145303 -122443985 + L1MB5 LINE L1 5784 6174 0 519 225 35 31 chr10 23145307 23145502 -122443786 + L1ME LINE L1 5423 5615 -506 224 178 133 0 chr10 23145503 23145548 -122443740 + L2 LINE L2 3258 3308 -5 239 326 87 33 chr10 23145692 23145784 -122443504 + MIR SINE MIR 29 125 -137 1674 96 27 0 chr10 23146403 23146623 -122442665 + AluSg/x SINE Alu 86 311 -1 180 0 0 0 chr10 23147157 23147177 -122442111 + (A)n Simple_repeat Simple_repeat 1 20 0 21 36 0 0 chr10 23147663 23147691 -122441597 + AT_rich Low_complexity Low_complexity 1 28 0 1477 178 56 86 chr10 23148990 23149434 -122439854 - MER63B DNA MER1_type 0 436 6 2140 116 3 3 chr10 23149548 23149842 -122439446 - AluSx SINE Alu -18 294 1 1410 116 0 0 chr10 23150479 23150693 -122438595 + AluSc SINE Alu 98 311 0 236 241 17 0 chr10 23151376 23151434 -122437854 - 5S rRNA rRNA -29 92 34 22 70 0 0 chr10 23151596 23151639 -122437649 + AT_rich Low_complexity Low_complexity 1 43 0 310 242 121 0 chr10 23152154 23152245 -122437043 + MIR SINE MIR 128 229 -33 2325 96 3 0 chr10 23152596 23152889 -122436399 - AluSx SINE Alu -18 294 1 2073 104 0 11 chr10 23153221 23153544 -122435744 + AluSg SINE Alu 5 324 0 752 105 65 0 chr10 23153821 23153945 -122435343 - MLT1C LTR MaLR -335 132 1 346 238 101 70 chr10 23154034 23154261 -122435027 + L1ME1 LINE L1 2060 2293 -4103 4003 83 3 23 chr10 23154264 23154707 -122434581 + MER41A LTR ERV1 1 433 -121 2242 85 3 0 chr10 23154707 23155024 -122434264 - AluSp SINE Alu 0 318 1 4003 83 3 23 chr10 23155024 23155144 -122434144 + MER41A LTR ERV1 433 554 0 2220 123 0 0 chr10 23155234 23155535 -122433753 - AluSx SINE Alu -11 301 1 561 269 164 2 chr10 23155552 23155657 -122433631 + L1ME1 LINE L1 3052 3139 -3076 2353 94 3 0 chr10 23155657 23155966 -122433322 + AluSp SINE Alu 1 310 -3 561 269 164 2 chr10 23155966 23156262 -122433026 + L1ME1 LINE L1 3139 3518 -2697 1230 246 83 16 chr10 23156275 23156723 -122432565 + L1ME1 LINE L1 3678 4155 -2060 1502 161 3 71 chr10 23156726 23157050 -122432238 + AluJb SINE Alu 1 302 -10 2557 241 50 25 chr10 23157052 23157146 -122432142 + L1ME1 LINE L1 5017 5107 -1128 2070 107 0 4 chr10 23157146 23157452 -122431836 + AluY SINE Alu 1 305 0 2557 241 50 25 chr10 23157452 23158506 -122430782 + L1ME1 LINE L1 5107 6191 -44 398 274 0 25 chr10 23158403 23158560 -122430728 + L1MA10 LINE L1 6248 6400 -3 * 2293 122 0 0 chr10 23158659 23158962 -122430326 + AluSx SINE Alu 1 303 -9 1410 275 73 14 chr10 23159101 23160142 -122429146 + L1M4 LINE L1 2225 3326 -2820 429 237 30 46 chr10 23160144 23160275 -122429013 - MER3 DNA MER1_type -1 208 80 1340 119 19 5 chr10 23160386 23160596 -122428692 + MER41E LTR ERV1 1 213 -299 2470 80 0 13 chr10 23160596 23160908 -122428380 + AluSx SINE Alu 1 308 -4 723 184 75 128 chr10 23160908 23160932 -122428356 + L1MD2 LINE L1 5724 5748 -611 2335 88 7 0 chr10 23160932 23161229 -122428059 - AluSp SINE Alu -14 299 1 723 184 75 128 chr10 23161229 23161509 -122427779 + L1MD2 LINE L1 5748 6012 -347 4734 123 31 89 chr10 23161511 23161976 -122427312 + MER4D LTR ERV1 1 454 -449 412 119 0 0 chr10 23161976 23162043 -122427245 + Alu SINE Alu 237 303 -9 4734 123 31 89 chr10 23162043 23162469 -122426819 + MER4D LTR ERV1 454 903 0 267 298 26 18 chr10 23162469 23162583 -122426705 + L1MD2 LINE L1 6019 6133 -226 536 213 37 37 chr10 23162594 23162758 -122426530 + L1MD2 LINE L1 6196 6359 0 533 266 77 40 chr10 23162763 23163116 -122426172 + L1M4 LINE L1 3633 3998 -2148 3097 200 103 84 chr10 23163135 23163298 -122425990 + L1ME3A LINE L1 5 163 -6379 1875 167 3 6 chr10 23163298 23163610 -122425678 + AluJo SINE Alu 1 311 -1 3097 200 103 84 chr10 23163610 23164467 -122424821 + L1ME3A LINE L1 163 1002 -5540 1715 153 47 0 chr10 23164467 23164741 -122424547 - AluSx SINE Alu -25 287 1 3097 200 103 84 chr10 23164741 23164880 -122424408 + L1ME3A LINE L1 1002 1137 -5405 2141 105 17 3 chr10 23164880 23165176 -122424112 - AluSx SINE Alu -12 300 1 3097 200 103 84 chr10 23165176 23165647 -122423641 + L1ME3A LINE L1 1137 1675 -4867 1966 172 91 35 chr10 23165647 23166111 -122423177 + LTR2B LTR ERV1 1 490 0 1414 236 184 22 chr10 23166111 23166789 -122422499 + L1ME3A LINE L1 1672 2459 -4187 * 1748 213 41 61 chr10 23166771 23166940 -122422348 + L1MB7 LINE L1 5649 5820 -364 1536 172 6 57 chr10 23166940 23167254 -122422034 + AluJo SINE Alu 1 298 -14 1748 213 41 61 chr10 23167254 23167623 -122421665 + L1MB7 LINE L1 5820 6176 -8 2105 123 0 22 chr10 23167669 23167986 -122421302 - AluSx SINE Alu -1 311 2 1417 206 0 0 chr10 23168009 23168262 -122421026 - AluJo SINE Alu -59 253 1 1192 278 110 30 chr10 23168309 23168450 -122420838 + L1ME3A LINE L1 4550 4678 -1986 2039 141 3 0 chr10 23168450 23168747 -122420541 + AluSx SINE Alu 1 298 -14 1192 278 110 30 chr10 23168747 23168922 -122420366 + L1ME3A LINE L1 4678 4838 -1826 1990 135 7 3 chr10 23168922 23169218 -122420070 - AluSx SINE Alu -15 297 1 1192 278 110 30 chr10 23169218 23169802 -122419486 + L1ME3A LINE L1 4838 5374 -1290 1595 208 3 0 chr10 23169802 23170090 -122419198 + AluJb SINE Alu 4 292 -20 228 67 0 0 chr10 23170090 23170120 -122419168 + (TA)n Simple_repeat Simple_repeat 2 31 0 1192 278 110 30 chr10 23170120 23170564 -122418724 + L1ME3A LINE L1 5373 6082 -582 1079 169 94 0 chr10 23170565 23170778 -122418510 - Tigger2 DNA MER2_type 0 2718 2486 4172 160 23 12 chr10 23170835 23171571 -122417717 - Tigger2 DNA MER2_type -1974 744 1 860 277 146 17 chr10 23171617 23172028 -122417260 + L1ME3A LINE L1 6154 6617 -51 14274 137 29 29 chr10 23172029 23172148 -122417140 - Tigger1 DNA MER2_type 0 2418 2300 2152 118 0 0 chr10 23172148 23172437 -122416851 + AluSx SINE Alu 1 289 -23 14274 137 29 29 chr10 23172437 23174679 -122414609 - Tigger1 DNA MER2_type -118 2300 54 2330 92 0 0 chr10 23174679 23174973 -122414315 + AluY SINE Alu 1 294 -17 14274 137 29 29 chr10 23174973 23175012 -122414276 - Tigger1 DNA MER2_type -2363 55 17 1692 186 0 0 chr10 23175779 23176058 -122413230 + AluSx SINE Alu 6 284 -28 396 0 0 0 chr10 23176058 23176102 -122413186 + (CA)n Simple_repeat Simple_repeat 2 45 0 2016 201 81 3 chr10 23176311 23176695 -122412593 - MER47B DNA MER2_type -3 415 2 302 313 112 0 chr10 23176720 23176854 -122412434 + L1MC/D LINE L1 4903 5051 -1095 455 289 74 42 chr10 23177039 23177351 -122411937 + L1MC/D LINE L1 5308 5629 -2179 208 147 0 0 chr10 23177380 23177414 -122411874 + (TATG)n Simple_repeat Simple_repeat 1 34 0 15208 177 38 14 chr10 23177676 23181703 -122407585 + L1PA13 LINE L1 1981 6113 -50 2358 148 52 2 chr10 23181816 23182222 -122407066 - MSTA LTR MaLR 0 428 3 6772 209 163 35 chr10 23182347 23182941 -122406347 + L1MDa LINE L1 94 611 -5929 2131 113 0 26 chr10 23182941 23183251 -122406037 + AluSx SINE Alu 6 307 -5 6772 209 163 35 chr10 23183251 23183715 -122405573 + L1MDa LINE L1 611 1014 -5526 2264 112 3 0 chr10 23183715 23184018 -122405270 + AluSx SINE Alu 1 304 -8 6772 209 163 35 chr10 23184018 23185154 -122404134 + L1MDa LINE L1 1014 2569 -3971 234 0 0 0 chr10 23185163 23185189 -122404099 + (CA)n Simple_repeat Simple_repeat 2 27 0 4162 252 40 41 chr10 23185243 23186151 -122403137 + L1MDa LINE L1 2486 3393 -3147 1999 139 10 3 chr10 23186151 23186454 -122402834 + AluSx SINE Alu 1 305 -7 4162 252 40 41 chr10 23186454 23187095 -122402193 + L1MDa LINE L1 3393 4001 -2539 2071 140 0 7 chr10 23187095 23187395 -122401893 + AluSq SINE Alu 1 298 -15 4162 252 40 41 chr10 23187395 23187483 -122401805 + L1MDa LINE L1 4001 4088 -2452 1267 181 47 106 chr10 23187483 23187870 -122401418 + MLT1A1 LTR MaLR 2 365 0 7377 209 58 28 chr10 23187870 23189551 -122399737 + MLT1A1-int LTR MaLR 1 1731 -4 1137 185 41 123 chr10 23189563 23189953 -122399335 + MLT1A1 LTR MaLR 1 358 -7 1038 236 30 27 chr10 23189956 23190257 -122399031 + L1MDa LINE L1 4085 4386 -2154 724 147 147 12 chr10 23190269 23190536 -122398752 + MER1B DNA MER1_type 1 339 0 1880 233 29 14 chr10 23190543 23191105 -122398183 + L1MDa LINE L1 4398 4967 -1573 1269 165 169 0 chr10 23191110 23191358 -122397930 + Tigger3(Golem) DNA MER2_type 2 291 -2738 1331 126 0 74 chr10 23191358 23191589 -122397699 - AluSq SINE Alu -12 301 88 329 136 0 0 chr10 23191594 23191653 -122397635 + Tigger3(Golem) DNA MER2_type 282 340 -2689 3396 240 47 14 chr10 23191658 23192512 -122396776 + L1PA12 LINE L1 11 892 -6689 686 241 40 45 chr10 23192503 23192702 -122396586 - L1PA12 LINE L1 -6774 807 610 * 860 110 45 19 chr10 23192720 23192867 -122396421 - Tigger3(Golem) DNA MER2_type -325 2704 2551 2281 123 0 0 chr10 23192867 23193176 -122396112 + AluSx SINE Alu 1 309 -3 27 0 0 0 chr10 23194758 23194785 -122394503 + AT_rich Low_complexity Low_complexity 1 27 0 2039 105 50 0 chr10 23195134 23195411 -122393877 - AluSx SINE Alu -21 291 1 25 31 0 0 chr10 23195610 23195642 -122393646 + AT_rich Low_complexity Low_complexity 1 32 0 2186 95 30 0 chr10 23195730 23196025 -122393263 - AluSq SINE Alu -9 304 1 299 267 218 0 chr10 23196385 23196486 -122392802 - L2 LINE L2 0 3272 3150 252 233 17 0 chr10 23196499 23196559 -122392729 + MLT1A1 LTR MaLR 1 61 -444 483 187 22 65 chr10 23196560 23196699 -122392589 - L2 LINE L2 -69 3244 3112 22 0 0 0 chr10 23197273 23197295 -122391993 + AT_rich Low_complexity Low_complexity 1 22 0 243 250 89 0 chr10 23198493 23198549 -122390739 + L2 LINE L2 3204 3264 -8 1006 261 4 8 chr10 23199429 23199689 -122389599 + MIR SINE MIR 1 259 -3 317 332 153 37 chr10 23200232 23200500 -122388788 + L3 LINE CR1 1042 1340 -237 1979 133 0 3 chr10 23200501 23200787 -122388501 + AluSx SINE Alu 1 285 -27 587 62 83 3 chr10 23200795 23201086 -122388202 + (TA)n Simple_repeat Simple_repeat 1 314 0 267 299 0 0 chr10 23201086 23201153 -122388135 + L3 LINE CR1 1366 1432 -145 272 213 33 0 chr10 23201452 23201513 -122387775 + L2 LINE L2 3210 3272 0 2225 108 0 7 chr10 23201690 23201997 -122387291 - AluSx SINE Alu -7 305 1 322 198 151 38 chr10 23202293 23202399 -122386889 + L2 LINE L2 3192 3309 -4 327 304 60 29 chr10 23202440 23202620 -122386668 + MLT1J2 LTR MaLR 67 245 -164 2018 115 35 0 chr10 23202925 23203213 -122386075 - AluSx SINE Alu -12 300 3 1544 117 49 12 chr10 23203369 23203616 -122385672 + L1PA10 LINE L1 5891 6146 -22 619 148 23 0 chr10 23203618 23203632 -122385656 + GA-rich Low_complexity Low_complexity 1 13 -242 611 26 13 0 chr10 23203632 23203709 -122385579 + (GGAGA)n Simple_repeat Simple_repeat 2 79 0 619 148 23 0 chr10 23203709 23203868 -122385420 + GA-rich Low_complexity Low_complexity 13 255 0 365 123 0 0 chr10 23203868 23203925 -122385363 + (GGAA)n Simple_repeat Simple_repeat 2 58 0 242 250 161 27 chr10 23204433 23204506 -122384782 - L3 LINE CR1 -19 1558 1496 1812 159 19 30 chr10 23204506 23204876 -122384412 + MER47A DNA MER2_type 1 366 0 242 250 161 27 chr10 23204876 23204914 -122384374 - L3 LINE CR1 -81 1496 1432 246 143 16 32 chr10 23204964 23205027 -122384261 + T-rich Low_complexity Low_complexity 3 64 0 401 285 60 33 chr10 23205028 23205179 -122384109 + MIR3 SINE MIR 47 201 -7 552 240 138 30 chr10 23205974 23206307 -122382981 + L1MC5 LINE L1 7557 7925 -36 803 317 117 41 chr10 23206732 23207169 -122382119 + L1M4 LINE L1 2223 2625 -3521 2470 77 0 0 chr10 23207169 23207480 -122381808 + AluY SINE Alu 1 311 0 803 317 117 41 chr10 23207480 23208019 -122381269 + L1M4 LINE L1 2625 3273 -2873 185 135 243 0 chr10 23208033 23208070 -122381218 + MIR SINE MIR 98 143 -119 307 263 16 78 chr10 23208615 23208771 -122380517 - MLT2E LTR ERVL -361 162 19 402 48 81 0 chr10 23209356 23209418 -122379870 + L1MA9 LINE L1 6245 6311 -1 327 359 101 29 chr10 23209450 23209726 -122379562 - L2 LINE L2 -800 2514 2219 256 327 222 33 chr10 23209762 23210279 -122379009 - L2 LINE L2 -1265 2049 1435 1918 107 33 0 chr10 23210683 23210954 -122378334 - AluY SINE Alu 0 311 32 1416 218 9 88 chr10 23210991 23211446 -122377842 + L1ME LINE L1 5360 5778 -392 1037 209 142 29 chr10 23211452 23211763 -122377525 + MLT1A1 LTR MaLR 1 346 -19 284 152 0 0 chr10 23211909 23211955 -122377333 + Tigger2 DNA MER2_type 2 47 -2671 511 202 0 11 chr10 23212056 23212150 -122377138 + Tigger2 DNA MER2_type 2611 2703 -15 1286 104 0 0 chr10 23212544 23212707 -122376581 - AluSg/x SINE Alu -13 297 135 1350 143 196 14 chr10 23212960 23213240 -122376048 + MER44D DNA MER2_type 9 609 0 2273 106 3 6 chr10 23213858 23214169 -122375119 - AluSq SINE Alu -3 310 1 511 86 14 0 chr10 23214496 23214566 -122374722 - AluJ/FRAM SINE Alu -18 294 224 5621 144 9 1 chr10 23214573 23215453 -122373835 + Tigger1 DNA MER2_type 28 914 -1504 2055 85 4 0 chr10 23215526 23215785 -122373503 + AluSg SINE Alu 34 293 -17 1926 126 4 7 chr10 23216935 23217213 -122372075 + AluSx SINE Alu 4 280 -32 204 40 0 0 chr10 23217213 23217238 -122372050 + (CAAT)n Simple_repeat Simple_repeat 4 28 0 574 106 11 53 chr10 23217240 23217334 -122371954 - FLAM_A SINE Alu -25 117 28 23 54 0 0 chr10 23217578 23217615 -122371673 + AT_rich Low_complexity Low_complexity 1 37 0 26 30 0 0 chr10 23217994 23218027 -122371261 + AT_rich Low_complexity Low_complexity 1 33 0 276 100 0 0 chr10 23218278 23218318 -122370970 + (A)n Simple_repeat Simple_repeat 1 40 0 22 35 0 0 chr10 23219809 23219838 -122369450 + AT_rich Low_complexity Low_complexity 1 29 0 751 172 0 0 chr10 23221479 23221601 -122367687 + FLAM_A SINE Alu 1 122 -11 207 0 0 0 chr10 23221604 23221627 -122367661 + (TTAAA)n Simple_repeat Simple_repeat 3 25 0 2541 49 13 0 chr10 23221829 23222133 -122367155 + AluY SINE Alu 1 308 -3 23 54 0 0 chr10 23222614 23222651 -122366637 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr10 23223993 23224014 -122365274 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr10 23227632 23227655 -122361633 + AT_rich Low_complexity Low_complexity 1 23 0 24 100 0 0 chr10 23229507 23229587 -122359701 + AT_rich Low_complexity Low_complexity 1 80 0 1711 150 0 62 chr10 23230509 23230815 -122358473 - AluJo SINE Alu -25 287 1 248 296 0 0 chr10 23230817 23230871 -122358417 - Tigger3(Golem) DNA MER2_type -2975 54 1 2394 209 28 4 chr10 23230925 23231461 -122357827 + L1MB7 LINE L1 5627 6175 -9 1603 168 66 0 chr10 23231481 23231755 -122357533 - AluJb SINE Alu -20 292 1 515 212 49 108 chr10 23233029 23233232 -122356056 - MER112 DNA MER1_type -12 248 58 1986 122 11 0 chr10 23235492 23235778 -122353510 - AluSx SINE Alu -23 289 1 1792 152 10 21 chr10 23237558 23237848 -122351440 + AluJb SINE Alu 1 287 -25 458 237 59 30 chr10 23237910 23238079 -122351209 + L1M4 LINE L1 5 178 -6364 330 261 152 43 chr10 23238147 23238285 -122351003 + L1M4 LINE L1 330 482 -6060 667 102 213 0 chr10 23238295 23238403 -122350885 - AluJb SINE Alu -181 131 1 625 93 187 13 chr10 23238490 23238640 -122350648 + Tigger3(Golem) DNA MER2_type 2385 2560 -469 1049 76 0 182 chr10 23238647 23238883 -122350405 + 7SK RNA RNA 1 193 0 4149 221 56 43 chr10 23238883 23239185 -122350103 + L1M4 LINE L1 541 838 -5808 6358 120 88 22 chr10 23239185 23240337 -122348951 + Tigger3b DNA MER2_type 2 1230 -1 4149 221 56 43 chr10 23240337 23241538 -122347750 + L1M4 LINE L1 838 2081 -4565 1829 139 91 15 chr10 23241538 23241877 -122347411 + MLT1A1 LTR MaLR 1 365 0 4149 221 56 43 chr10 23241877 23242521 -122346767 + L1M4 LINE L1 2081 2715 -3931 701 215 56 0 chr10 23242524 23242668 -122346620 - MER6 DNA MER2_type 0 865 -7 2684 211 47 16 chr10 23242711 23243412 -122345876 + L1M4 LINE L1 2718 3440 -3204 331 214 65 78 chr10 23243741 23243895 -122345393 + L1M4 LINE L1 3418 3569 -3075 22 0 0 0 chr10 23243963 23243985 -122345303 + AT_rich Low_complexity Low_complexity 1 22 0 1166 195 28 0 chr10 23243986 23244201 -122345087 - MER58A DNA MER1_type 0 224 4 2165 94 0 3 chr10 23244377 23244692 -122344596 - AluSc SINE Alu 0 309 1 1733 137 63 19 chr10 23244912 23245278 -122344010 + Tigger3(Golem) DNA MER2_type 1 3028 -1 180 0 0 0 chr10 23245447 23245467 -122343821 + (A)n Simple_repeat Simple_repeat 1 20 0 21 0 0 0 chr10 23245641 23245662 -122343626 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 23245718 23245746 -122343542 + AT_rich Low_complexity Low_complexity 1 28 0 2422 47 0 56 chr10 23246473 23246795 -122342493 + AluY SINE Alu 1 304 -7 207 0 0 0 chr10 23248326 23248349 -122340939 + (TTTA)n Simple_repeat Simple_repeat 3 25 0 233 247 129 41 chr10 23248790 23248960 -122340328 - L1MC/D LINE L1 -1961 5847 5663 292 254 254 0 chr10 23249038 23249160 -122340128 - MER112 DNA MER1_type -96 164 12 261 200 67 83 chr10 23249224 23249344 -122339944 - L1P3 LINE L1 -512 5660 5543 2194 107 7 0 chr10 23249535 23249844 -122339444 - AluSx SINE Alu -1 311 1 195 129 0 0 chr10 23249897 23249928 -122339360 + (T)n Simple_repeat Simple_repeat 1 31 0 294 330 160 15 chr10 23250261 23250467 -122338821 - L3 LINE CR1 -92 1485 1250 1133 192 64 0 chr10 23251340 23251574 -122337714 + MER5C DNA MER1_type 1 249 -75 676 181 0 45 chr10 23252603 23252758 -122336530 + L1MA9 LINE L1 6156 6303 -9 1628 231 132 14 chr10 23253921 23254422 -122334866 - HsTC2 DNA Tc2 -22 1876 1317 2188 120 0 7 chr10 23254422 23254723 -122334565 - AluSx SINE Alu -11 301 3 280 274 0 118 chr10 23254760 23254855 -122334433 - HsTC2 DNA Tc2 -1751 147 71 2410 75 0 10 chr10 23254855 23255160 -122334128 + AluY SINE Alu 1 302 -9 280 274 0 118 chr10 23255160 23255199 -122334089 - HsTC2 DNA Tc2 -1827 71 29 394 292 139 0 chr10 23255251 23255395 -122333893 + MIR SINE MIR 75 238 -24 252 283 62 26 chr10 23255720 23255833 -122333455 + MLT1J1 LTR MaLR 59 175 -271 454 226 29 29 chr10 23255934 23256071 -122333217 + MLT1J LTR MaLR 374 510 -1 483 170 19 38 chr10 23256163 23256269 -122333019 + L1MC4a LINE L1 6731 6834 -974 * 1294 223 94 12 chr10 23256267 23256608 -122332680 + L1ME1 LINE L1 5794 6162 -4 210 143 0 0 chr10 23256634 23256669 -122332619 + (A)n Simple_repeat Simple_repeat 1 35 0 2136 122 0 6 chr10 23256678 23256990 -122332298 + AluSq SINE Alu 1 310 -3 3098 219 121 15 chr10 23256998 23257725 -122331563 + L1MC4a LINE L1 6849 7684 -124 3203 126 76 2 chr10 23257725 23258241 -122331047 - MER41C LTR ERV1 0 554 1 3098 219 121 15 chr10 23258241 23258381 -122330907 + L1MC4a LINE L1 7684 7808 0 422 249 57 57 chr10 23258398 23258643 -122330645 + L1MEd LINE L1 960 1204 -4915 232 325 93 38 chr10 23258698 23258935 -122330353 + HAL1 LINE L1 1413 1662 -845 1831 149 17 7 chr10 23259156 23259458 -122329830 + AluJb SINE Alu 3 307 -5 300 232 58 32 chr10 23259866 23260021 -122329267 + L1MEd LINE L1 2114 2272 -3857 1848 129 7 7 chr10 23260129 23260424 -122328864 - MER41-int LTR ERV1 -2456 3490 3196 1326 136 0 76 chr10 23260955 23261205 -122328083 + AluJb SINE Alu 74 304 -8 1600 259 72 2 chr10 23261365 23261870 -122327418 - L2 LINE L2 0 3313 2776 4823 155 24 17 chr10 23261914 23262749 -122326539 - L1MB4 LINE L1 -12 6168 5323 562 67 0 44 chr10 23262749 23262839 -122326449 - L1PA8 LINE L1 -6 6166 6081 4823 155 24 17 chr10 23262839 23262960 -122326328 - L1MB4 LINE L1 -857 5323 5204 1094 201 96 12 chr10 23262966 23263215 -122326073 - AluJb SINE Alu -22 290 21 250 242 50 8 chr10 23263255 23263375 -122325913 - L1M4c LINE L1 -4041 2343 2219 288 200 15 0 chr10 23263396 23263461 -122325827 + L1M4c LINE L1 2135 2200 -4184 1132 217 104 41 chr10 23263462 23263780 -122325508 - L2 LINE L2 -534 2780 2443 2059 130 16 0 chr10 23263851 23264158 -122325130 - AluSx SINE Alu 0 312 1 2054 136 0 10 chr10 23264239 23264540 -122324748 + AluSx SINE Alu 1 298 -14 658 142 0 99 chr10 23264904 23264941 -122324347 + L1MB7 LINE L1 5915 5954 -230 2208 87 7 0 chr10 23264941 23265241 -122324047 + AluY SINE Alu 1 302 -9 658 142 0 99 chr10 23265241 23265253 -122324035 + L1MB7 LINE L1 5954 5966 -218 658 196 40 0 chr10 23265253 23265401 -122323887 + L1MB7 LINE L1 6022 6175 -9 2251 82 17 0 chr10 23266477 23266769 -122322519 + AluSg SINE Alu 1 297 -13 297 0 0 0 chr10 23266812 23266845 -122322443 + (TG)n Simple_repeat Simple_repeat 2 34 0 468 214 84 65 chr10 23266876 23267030 -122322258 - L2 LINE L2 -597 2717 2561 379 202 16 0 chr10 23267033 23267157 -122322131 + (TA)n Simple_repeat Simple_repeat 1 126 0 1813 198 32 11 chr10 23267274 23267648 -122321640 + MSTD LTR MaLR 4 385 -11 689 140 118 38 chr10 23267945 23268131 -122321157 + L1MA8 LINE L1 6088 6288 -3 1126 129 60 51 chr10 23268499 23268716 -122320572 + MER20 DNA MER1_type 1 219 0 779 216 100 29 chr10 23268719 23268960 -122320328 + MIR SINE MIR 5 262 0 285 98 0 0 chr10 23269802 23269843 -122319445 + (T)n Simple_repeat Simple_repeat 1 41 0 8686 94 4 3 chr10 23370049 23371236 -122218052 + L1PA7 LINE L1 365 1552 -4594 * 40646 55 46 2 chr10 23371217 23376710 -122212578 + L1P1 LINE L1 1 5740 -415 4835 91 6 1 chr10 23376819 23377470 -122211818 + L1PA2 LINE L1 5500 6153 -2 26967 69 47 1 chr10 23377490 23381664 -122207624 + L1PA7 LINE L1 1522 5892 -262 2099 91 3 18 chr10 23381818 23382103 -122207185 + L1PA7 LINE L1 5870 6150 -4 1884 155 7 3 chr10 23382319 23382616 -122206672 + AluJb SINE Alu 1 298 -14 240 220 0 20 chr10 23382792 23382842 -122206446 + L2 LINE L2 3244 3292 -21 215 289 26 13 chr10 23383624 23383700 -122205588 - L2 LINE L2 0 3272 3196 487 329 56 9 chr10 23383718 23383934 -122205354 + MLT1J LTR MaLR 286 511 0 1675 167 0 16 chr10 23384940 23385251 -122204037 - L1P LINE L1 -5840 306 1 430 261 49 20 chr10 23385342 23385545 -122203743 - L1ME4a LINE L1 -169 5952 5744 717 180 58 58 chr10 23385750 23385939 -122203349 - MER53 DNA DNA 0 189 1 369 216 155 26 chr10 23385967 23386083 -122203205 - L1ME4a LINE L1 -603 5518 5388 965 321 70 40 chr10 23386543 23387125 -122202163 + L2 LINE L2 2267 2866 -448 1747 168 0 7 chr10 23388378 23388670 -122200618 + AluJo SINE Alu 17 306 -6 1639 148 0 72 chr10 23388934 23389239 -122200049 + AluJo SINE Alu 2 284 -28 609 264 22 48 chr10 23389380 23389611 -122199677 + AluJo SINE Alu 2 226 -86 402 94 0 0 chr10 23390178 23390231 -122199057 - Alu SINE Alu -25 287 235 226 113 16 145 chr10 23390686 23390748 -122198540 - MER20B DNA MER1_type -653 130 77 816 152 0 43 chr10 23391116 23391254 -122198034 - FLAM_C SINE Alu -1 132 1 2043 143 0 6 chr10 23392294 23392608 -122196680 - AluSx SINE Alu 0 312 1 646 175 42 0 chr10 23392672 23392792 -122196496 - L1MA5A LINE L1 -1 6296 6172 1880 148 24 7 chr10 23392792 23393082 -122196206 - AluJb SINE Alu -7 305 11 1262 113 90 143 chr10 23393085 23393386 -122195902 + LTR12 LTR ERV1 1 285 -429 342 214 11 0 chr10 23393387 23393476 -122195812 + LTR30 LTR ERV1 553 642 -80 707 155 18 22 chr10 23393476 23393616 -122195672 + LTR12 LTR ERV1 300 584 -130 * 27632 112 13 16 chr10 23393598 23398426 -122190862 + HERV9 LTR ERV1 54 4953 -3446 4964 111 48 14 chr10 23398403 23399359 -122189929 + HERV9 LTR ERV1 709 1740 -5156 * 5294 119 11 4 chr10 23399369 23400134 -122189154 + HERV9 LTR ERV1 7630 8399 0 1042 132 7 19 chr10 23400324 23400514 -122188774 + LTR12 LTR ERV1 72 1984 -454 345 142 52 164 chr10 23400485 23400619 -122188669 + LTR12 LTR ERV1 159 277 -437 * 330 263 10 0 chr10 23400619 23400718 -122188570 + LTR30 LTR ERV1 544 643 -79 745 99 0 0 chr10 23400719 23400820 -122188468 + LTR12 LTR ERV1 481 581 -133 2756 108 69 77 chr10 23400828 23401336 -122187952 - L1MA5A LINE L1 -121 6176 5673 287 330 26 36 chr10 23401711 23401905 -122187383 + L2 LINE L2 2552 2743 -571 2370 96 0 0 chr10 23401911 23402214 -122187074 + AluY SINE Alu 1 303 -8 1102 285 38 12 chr10 23402290 23402690 -122186598 - L1M4 LINE L1 -1805 4405 3996 22 35 0 0 chr10 23402719 23402748 -122186540 + AT_rich Low_complexity Low_complexity 1 29 0 1412 204 20 30 chr10 23402886 23403185 -122186103 - AluJo SINE Alu -16 296 1 3540 165 47 45 chr10 23403186 23404379 -122184909 - L1MA9 LINE L1 -346 5966 4757 * 4549 142 29 31 chr10 23404373 23404481 -122184807 - L1MA9 LINE L1 -1622 4524 4417 1620 173 48 7 chr10 23404481 23404781 -122184507 + AluJo SINE Alu 1 311 0 4549 142 29 31 chr10 23404781 23405511 -122183777 - L1MA9 LINE L1 -1729 4417 3687 2407 244 82 28 chr10 23405510 23406194 -122183094 - L1M4 LINE L1 -5420 721 1 * 198 0 0 0 chr10 23406601 23406623 -122182665 + (ATG)n Simple_repeat Simple_repeat 3 24 0 6166 119 11 5 chr10 23407458 23408684 -122180604 + L1PA16 LINE L1 4901 6149 -17 2437 101 0 0 chr10 23409616 23409924 -122179364 + AluSx SINE Alu 3 310 -2 2290 145 17 9 chr10 23409941 23410285 -122179003 - MER7A DNA MER2_type 0 346 2 294 125 0 0 chr10 23410705 23410753 -122178535 + (CAT)n Simple_repeat Simple_repeat 3 50 0 282 333 9 9 chr10 23410771 23410879 -122178409 - MIR SINE MIR -14 248 141 461 145 0 0 chr10 23410879 23410941 -122178347 - Alu SINE Alu -17 295 234 192 324 108 22 chr10 23411075 23411214 -122178074 - L2 LINE L2 -1 3271 3121 1098 167 0 0 chr10 23411890 23412052 -122177236 + FRAM SINE Alu 1 162 -4 2229 181 67 31 chr10 23412131 23412651 -122176637 - LTR55 LTR ERV -9 539 1 249 276 133 0 chr10 23412925 23413023 -122176265 + MIR SINE MIR 96 206 -56 2094 189 48 17 chr10 23413456 23413869 -122175419 + MSTB LTR MaLR 1 426 0 297 309 21 0 chr10 23414201 23414295 -122174993 + L2 LINE L2 3218 3313 0 22 35 0 0 chr10 23414631 23414660 -122174628 + AT_rich Low_complexity Low_complexity 1 29 0 2542 176 44 0 chr10 23414712 23415120 -122174168 - MSTB LTR MaLR 0 426 1 4870 137 51 20 chr10 23415274 23415930 -122173358 - L1MA8 LINE L1 -4 6287 5598 2252 55 0 98 chr10 23415930 23416258 -122173030 - AluY SINE Alu -15 296 1 4870 137 51 20 chr10 23416258 23416441 -122172847 - L1MA8 LINE L1 -693 5598 5422 245 208 0 0 chr10 23416441 23416494 -122172794 - AluJ/monomer SINE Alu -9 293 241 1983 111 7 0 chr10 23416616 23416886 -122172402 - AluSx SINE Alu -40 272 1 3063 143 31 44 chr10 23416886 23417522 -122171766 - L1MA8 LINE L1 -728 5440 4803 21 0 0 0 chr10 23418002 23418023 -122171265 + AT_rich Low_complexity Low_complexity 1 21 0 349 269 39 0 chr10 23418264 23418368 -122170920 + LTR16A LTR ERVL 3 110 -340 472 294 12 12 chr10 23418420 23418580 -122170708 + LTR16A LTR ERVL 202 361 -89 417 128 13 39 chr10 23418975 23419053 -122170235 + L1PA16 LINE L1 6091 6166 0 21 0 0 0 chr10 23419593 23419614 -122169674 + AT_rich Low_complexity Low_complexity 1 21 0 431 196 18 62 chr10 23420679 23420791 -122168497 + MIR SINE MIR 109 215 -47 1759 172 0 21 chr10 23420791 23421076 -122168212 + AluJo SINE Alu 1 279 -33 2454 73 0 0 chr10 23421424 23421726 -122167562 - AluY SINE Alu -9 302 1 6158 79 0 4 chr10 23421795 23422188 -122167100 - L1PB1 LINE L1 -5 6146 5753 261 0 0 0 chr10 23422188 23422217 -122167071 + (CA)n Simple_repeat Simple_repeat 2 30 0 6158 79 0 4 chr10 23422217 23423095 -122166193 - L1PB1 LINE L1 -398 5753 4910 1832 166 3 16 chr10 23423681 23423988 -122165300 - AluJo SINE Alu -9 303 1 1735 184 20 0 chr10 23425528 23425827 -122163461 - AluJo SINE Alu -7 305 1 3834 196 78 27 chr10 23426575 23427300 -122161988 + L1MCb LINE L1 4 690 -5874 2396 96 0 0 chr10 23427300 23427603 -122161685 + AluSc SINE Alu 1 303 -6 3834 196 78 27 chr10 23427603 23428155 -122161133 + L1MCb LINE L1 690 1212 -5352 2626 99 6 3 chr10 23428155 23428518 -122160770 - THE1B LTR MaLR 0 364 1 3834 196 78 27 chr10 23428518 23428965 -122160323 + L1MCb LINE L1 1212 1802 -4762 2226 162 23 39 chr10 23429440 23429693 -122159595 - MSTB LTR MaLR 0 426 180 2111 119 0 7 chr10 23429693 23429999 -122159289 + AluSx SINE Alu 2 305 0 2226 162 23 39 chr10 23429999 23430177 -122159111 - MSTB LTR MaLR -246 180 1 204 40 0 0 chr10 23430598 23430623 -122158665 + (CAA)n Simple_repeat Simple_repeat 3 27 0 2140 136 3 7 chr10 23431607 23431917 -122157371 + AluJo SINE Alu 1 309 -3 464 174 9 43 chr10 23432028 23432143 -122157145 - MER74B LTR ERVL -511 111 1 728 226 132 23 chr10 23432606 23432863 -122156425 + MER87 LTR ERV1 257 541 0 1394 228 58 17 chr10 23432870 23433283 -122156005 + MER74B LTR ERVL 183 612 -10 222 246 0 15 chr10 23434210 23434275 -122155013 + (TATAA)n Simple_repeat Simple_repeat 2 65 0 25 51 0 0 chr10 23434339 23434378 -122154910 + AT_rich Low_complexity Low_complexity 1 39 0 802 294 63 44 chr10 23434882 23435249 -122154039 - L2 LINE L2 -8 3305 2932 4012 232 50 23 chr10 23435317 23435650 -122153638 + L1 LINE L1 2639 2962 -3184 2260 104 0 0 chr10 23435650 23435948 -122153340 + AluY SINE Alu 1 298 -13 4012 232 50 23 chr10 23435948 23436083 -122153205 + L1 LINE L1 2962 3092 -3054 2212 126 10 0 chr10 23436083 23436393 -122152895 + AluSq SINE Alu 1 313 0 4012 232 50 23 chr10 23436393 23437256 -122152032 + L1 LINE L1 3092 4007 -2139 1062 227 60 25 chr10 23437255 23437608 -122151680 - L1M4 LINE L1 -3114 3032 2668 * 340 315 56 5 chr10 23437648 23437864 -122151424 - L1M4 LINE L1 -2205 3941 3715 475 297 115 70 chr10 23438177 23438534 -122150754 - L2 LINE L2 -10 3262 2890 219 150 25 0 chr10 23439310 23439350 -122149938 - L2 LINE L2 -5 3308 3268 201 317 37 49 chr10 23439506 23439670 -122149618 - L2 LINE L2 -410 2904 2743 1569 180 3 27 chr10 23439684 23439978 -122149310 - AluJo SINE Alu -25 287 1 26 0 0 0 chr10 23440003 23440029 -122149259 + AT_rich Low_complexity Low_complexity 1 26 0 29198 120 13 58 chr10 23440029 23446465 -122142823 - L1PA7 LINE L1 -11 6143 12 563 238 46 65 chr10 23446474 23446893 -122142395 - L1MC5 LINE L1 -908 6900 6499 1850 165 7 4 chr10 23447047 23447326 -122141962 + AluJo SINE Alu 6 285 -27 21 0 0 0 chr10 23448506 23448527 -122140761 + AT_rich Low_complexity Low_complexity 1 21 0 343 301 71 0 chr10 23448772 23448885 -122140403 - MIR SINE MIR -19 243 123 9201 154 131 54 chr10 23448974 23450667 -122138621 + L1MCa LINE L1 19 1582 -4844 1500 160 9 0 chr10 23450667 23450898 -122138390 + AluJb SINE Alu 73 305 -7 9201 154 131 54 chr10 23450898 23451067 -122138221 + L1MCa LINE L1 1582 1737 -4689 2143 144 21 0 chr10 23451067 23451406 -122137882 + MER7A DNA MER2_type 2 345 -1 9201 154 131 54 chr10 23451406 23451425 -122137863 + L1MCa LINE L1 1737 1753 -4673 2454 65 0 10 chr10 23451425 23451734 -122137554 - AluY SINE Alu -5 306 1 9201 154 131 54 chr10 23451734 23451999 -122137289 + L1MCa LINE L1 1753 1996 -4430 1483 142 146 8 chr10 23451999 23452253 -122137035 + AluJb SINE Alu 13 301 -11 9201 154 131 54 chr10 23452253 23452596 -122136692 + L1MCa LINE L1 1996 2311 -4115 2172 112 7 0 chr10 23452596 23452891 -122136397 - AluSq SINE Alu -16 297 1 9201 154 131 54 chr10 23452891 23453222 -122136066 + L1MCa LINE L1 2311 3051 -3375 811 155 0 0 chr10 23453737 23453853 -122135435 + FLAM_A SINE Alu 2 117 -16 27 49 0 0 chr10 23454062 23454103 -122135185 + AT_rich Low_complexity Low_complexity 1 41 0 30 0 0 0 chr10 23454143 23454173 -122135115 + AT_rich Low_complexity Low_complexity 1 30 0 519 175 77 108 chr10 23454603 23454715 -122134573 - MER5A DNA MER1_type 0 189 84 1937 130 65 3 chr10 23454715 23455008 -122134280 - AluJb SINE Alu -1 311 1 519 175 77 108 chr10 23455008 23455089 -122134199 - MER5A DNA MER1_type -105 84 2 1369 182 0 45 chr10 23456799 23457068 -122132220 + AluJo SINE Alu 37 293 -19 26 64 0 0 chr10 23457314 23457361 -122131927 + AT_rich Low_complexity Low_complexity 1 47 0 1669 224 28 71 chr10 23457458 23458024 -122131264 + MER34 LTR ERV1 1 542 0 563 83 28 9 chr10 23458713 23458822 -122130466 + (TG)n Simple_repeat Simple_repeat 1 111 0 29 47 0 0 chr10 23459827 23459870 -122129418 + AT_rich Low_complexity Low_complexity 1 43 0 655 198 43 0 chr10 23459870 23459986 -122129302 - FLAM_A SINE Alu -12 121 1 190 273 23 0 chr10 23460672 23460716 -122128572 + MIR SINE MIR 33 77 -131 2284 59 40 16 chr10 23460902 23461205 -122128083 - AluY SINE Alu -1 310 1 2108 120 30 0 chr10 23461604 23461904 -122127384 - AluSx SINE Alu -3 309 1 221 227 0 0 chr10 23462253 23462297 -122126991 - L2 LINE L2 -2 3311 3268 2030 173 45 47 chr10 23462370 23462840 -122126448 - MER74A LTR ERVL -73 485 15 1633 190 7 0 chr10 23462840 23463129 -122126159 + AluJo SINE Alu 3 293 -19 2030 173 45 47 chr10 23463129 23463144 -122126144 - MER74A LTR ERVL -543 15 1 366 307 23 47 chr10 23464343 23464558 -122124730 - MER63A DNA MER1_type 0 210 1 1944 139 3 7 chr10 23465126 23465421 -122123867 + AluJo SINE Alu 1 294 -18 1673 141 86 7 chr10 23466016 23466285 -122123003 + AluJo SINE Alu 1 290 -22 579 346 82 16 chr10 23466347 23466782 -122122506 - L2 LINE L2 -266 3006 2537 245 222 16 16 chr10 23467087 23467150 -122122138 + GA-rich Low_complexity Low_complexity 2 64 0 559 373 150 4 chr10 23467169 23467721 -122121567 - L2 LINE L2 -2417 897 265 201 272 12 99 chr10 23467686 23467767 -122121521 + L2 LINE L2 3229 3302 -11 * 4796 221 74 41 chr10 23468530 23469858 -122119430 - L1ME1 LINE L1 -5 6230 4947 2339 129 73 22 chr10 23469858 23470269 -122119019 - MSTB1 LTR MaLR 0 432 1 4796 221 74 41 chr10 23470269 23471562 -122117726 - L1ME1 LINE L1 -1288 4947 3473 2528 74 3 0 chr10 23471562 23471871 -122117417 - AluY SINE Alu -1 310 1 4796 221 74 41 chr10 23471871 23472486 -122116802 - L1ME1 LINE L1 -2762 3473 2880 1664 201 19 50 chr10 23472478 23472900 -122116388 - L1MB8 LINE L1 -1 6177 5769 * 1494 255 51 34 chr10 23472893 23473543 -122115745 - L1ME1 LINE L1 -3324 2891 2231 * 1050 166 4 22 chr10 23473546 23473775 -122115513 + MER1B DNA MER1_type 1 278 -61 1076 212 77 91 chr10 23473775 23474322 -122114966 - L1ME1 LINE L1 -4124 2272 1734 732 172 127 19 chr10 23474323 23474480 -122114808 + MER6B DNA MER2_type 32 205 -5 719 278 61 16 chr10 23474483 23474925 -122114363 - L1ME1 LINE L1 -4923 1473 1012 996 211 57 0 chr10 23475166 23475450 -122113838 - MER33 DNA MER1_type -32 292 1 2258 88 7 0 chr10 23475579 23475876 -122113412 - AluSc SINE Alu -10 299 1 1197 294 51 11 chr10 23475923 23476277 -122113011 + LTR16C LTR ERVL 101 468 -23 958 245 130 81 chr10 23476447 23476753 -122112535 + HAL1b LINE L1 73 363 -985 1747 184 0 0 chr10 23476753 23477041 -122112247 - AluJo SINE Alu -24 288 1 958 245 130 81 chr10 23477041 23477429 -122111859 + HAL1b LINE L1 363 813 -535 2436 111 0 0 chr10 23477429 23477781 -122111507 + L1PA13 LINE L1 5811 6162 -1 958 245 130 81 chr10 23477781 23477884 -122111404 + HAL1b LINE L1 813 910 -438 324 279 93 19 chr10 23478321 23478482 -122110806 + L1 LINE L1 3514 3686 -2460 433 278 226 39 chr10 23478627 23478933 -122110355 - L2 LINE L2 -994 2320 1958 1871 121 197 0 chr10 23479163 23479519 -122109769 - MSTA LTR MaLR -2 426 1 300 260 239 28 chr10 23479519 23479804 -122109484 - L2 LINE L2 -1389 1925 1581 209 33 33 0 chr10 23479913 23479943 -122109345 + (TTA)n Simple_repeat Simple_repeat 3 33 0 384 288 159 41 chr10 23479991 23480331 -122108957 - HAL1 LINE L1 -813 1694 1315 2275 101 7 0 chr10 23480509 23480807 -122108481 + AluSx SINE Alu 3 302 -10 27 0 0 0 chr10 23483582 23483609 -122105679 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr10 23483692 23483720 -122105568 + AT_rich Low_complexity Low_complexity 1 28 0 1942 140 17 0 chr10 23483820 23484113 -122105175 - AluSq SINE Alu -15 298 1 536 242 92 38 chr10 23484122 23484412 -122104876 - L1ME3 LINE L1 -2 6160 5844 37066 89 7 13 chr10 23484412 23490622 -122098666 + L1PA6 LINE L1 11 6181 0 705 194 124 0 chr10 23490636 23490822 -122098466 - L1ME3 LINE L1 -324 5838 5630 1516 280 79 34 chr10 23490830 23491712 -122097576 - L1ME3 LINE L1 -1032 5114 4193 1037 252 47 38 chr10 23491712 23492030 -122097258 - LTR40b LTR ERVL 0 462 142 39 50 0 0 chr10 23492350 23492410 -122096878 + AT_rich Low_complexity Low_complexity 1 60 0 1664 174 39 7 chr10 23492429 23492711 -122096577 + AluJb SINE Alu 1 291 -21 3786 197 1 1 chr10 23492730 23493501 -122095787 - L1 LINE L1 -2026 4120 3350 3279 213 13 0 chr10 23493495 23494205 -122095083 + L1 LINE L1 4116 4834 -1312 * 2423 84 3 0 chr10 23495455 23495764 -122093524 + AluSx SINE Alu 1 310 -2 252 100 0 0 chr10 23496020 23496060 -122093228 + (TTCC)n Simple_repeat Simple_repeat 4 43 0 1703 163 25 4 chr10 23496094 23496370 -122092918 - AluJo SINE Alu -30 282 1 273 269 137 6 chr10 23496409 23496584 -122092704 - HAL1 LINE L1 -220 2287 2090 898 264 109 48 chr10 23496644 23497084 -122092204 - HAL1 LINE L1 -2040 467 1 315 190 21 120 chr10 23499239 23499381 -122089907 + MIR SINE MIR 81 208 -54 268 253 13 13 chr10 23500368 23500443 -122088845 - MER20B DNA MER1_type 0 783 709 989 229 78 72 chr10 23500539 23500897 -122088391 - MLT1G1 LTR MaLR -173 393 43 943 130 269 10 chr10 23500913 23501121 -122088167 + AluSg SINE Alu 4 265 -45 279 226 19 0 chr10 23501131 23501184 -122088104 - MLT1G1 LTR MaLR -541 54 1 645 251 59 0 chr10 23501184 23501371 -122087917 - MER20B DNA MER1_type -69 714 517 26 30 0 0 chr10 23503073 23503106 -122086182 + AT_rich Low_complexity Low_complexity 1 33 0 493 228 22 60 chr10 23503273 23503457 -122085831 - MER96B DNA MER1_type? 0 417 241 252 323 44 25 chr10 23503689 23503847 -122085441 - MER20B DNA MER1_type -606 177 17 1506 144 6 113 chr10 23504516 23504843 -122084445 - AluJb SINE Alu -10 292 1 1642 169 3 60 chr10 23505682 23506001 -122083287 + AluJo SINE Alu 1 301 -11 762 206 0 7 chr10 23506481 23506622 -122082666 + MER69A DNA AcHobo 36 175 -2 646 302 67 76 chr10 23506684 23507253 -122082035 + L1MB8 LINE L1 4489 5052 -1094 1060 171 0 11 chr10 23507302 23507483 -122081805 - AluJb SINE Alu 0 312 134 2913 191 7 17 chr10 23507737 23508328 -122080960 + L1MB8 LINE L1 5574 6158 -20 855 310 59 26 chr10 23508436 23508975 -122080313 + L1ME4a LINE L1 5355 5911 -210 234 0 0 0 chr10 23509280 23509306 -122079982 + (CAAAAA)n Simple_repeat Simple_repeat 3 28 0 192 125 0 0 chr10 23510118 23510150 -122079138 + (TATATG)n Simple_repeat Simple_repeat 3 34 0 1475 113 0 0 chr10 23510150 23510345 -122078943 - AluSg/x SINE Alu -18 292 98 1780 118 63 41 chr10 23510851 23511214 -122078074 - THE1C LTR MaLR 0 375 5 205 306 0 0 chr10 23511305 23511390 -122077898 + A-rich Low_complexity Low_complexity 1 85 0 935 286 84 35 chr10 23511432 23511838 -122077450 + LTR16A LTR ERVL 25 450 0 1054 311 44 19 chr10 23511838 23512314 -122076974 + HERV16 LTR ERVL 1 488 -4508 1211 274 59 13 chr10 23512663 23513134 -122076154 + HERV16 LTR ERVL 933 1425 -3571 1287 189 51 31 chr10 23513293 23513547 -122075741 + AluJo SINE Alu 1 259 -53 198 0 0 0 chr10 23513548 23513570 -122075718 + (GAAAA)n Simple_repeat Simple_repeat 3 24 0 269 264 140 67 chr10 23513723 23513916 -122075372 + HERV16 LTR ERVL 1833 2039 -2957 1343 181 4 0 chr10 23513917 23514149 -122075139 + AluJo SINE Alu 68 300 -12 349 210 0 25 chr10 23514163 23514244 -122075044 + MLT1H1 LTR MaLR 469 547 -8 243 298 21 21 chr10 23514478 23514572 -122074716 + MLT1-int LTR MaLR 398 491 -880 1644 144 100 10 chr10 23514683 23514982 -122074306 - L1MC3 LINE L1 -354 7431 7106 807 112 30 37 chr10 23515017 23515151 -122074137 - FLAM_C SINE Alu 0 133 1 281 222 12 25 chr10 23515172 23515253 -122074035 - L1M4 LINE L1 -1305 4841 4762 4749 174 22 39 chr10 23515294 23516689 -122072599 - L1MB3 LINE L1 -2 6181 4810 925 227 118 5 chr10 23516703 23517033 -122072255 + MLT2B1 LTR ERVL 1 520 0 360 266 62 79 chr10 23517190 23517543 -122071745 - L1ME4a LINE L1 -125 5996 5650 1233 209 12 91 chr10 23518175 23518581 -122070707 + MLT1A2 LTR MaLR 1 374 0 186 43 0 0 chr10 23519091 23519114 -122070174 + (A)n Simple_repeat Simple_repeat 1 23 0 285 272 200 8 chr10 23519166 23519291 -122069997 + L1ME3A LINE L1 5999 6147 -23 427 129 0 0 chr10 23520365 23520427 -122068861 - AluJo SINE Alu -16 296 235 815 167 7 0 chr10 23520427 23520565 -122068723 - AluJo SINE Alu -163 149 11 373 278 112 16 chr10 23521296 23521483 -122067805 + MIR SINE MIR 20 224 -38 708 0 0 0 chr10 23522526 23522601 -122066687 - tRNA-Asn-AAC tRNA tRNA -2 75 1 21 0 0 0 chr10 23525067 23525088 -122064200 + AT_rich Low_complexity Low_complexity 1 21 0 2236 100 7 3 chr10 23525088 23525388 -122063900 + AluSq SINE Alu 1 301 -12 1879 160 0 25 chr10 23525712 23526031 -122063257 + AluJo SINE Alu 1 311 -1 21 57 0 0 chr10 23526048 23526083 -122063205 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr10 23526210 23526233 -122063055 + AT_rich Low_complexity Low_complexity 1 23 0 1585 189 35 0 chr10 23527090 23527210 -122062078 + AluJo SINE Alu 1 115 -197 207 0 0 0 chr10 23527210 23527233 -122062055 + (TAA)n Simple_repeat Simple_repeat 2 24 0 1585 189 35 0 chr10 23527233 23527397 -122061891 + AluJo SINE Alu 115 295 -17 1444 151 0 9 chr10 23527608 23527840 -122061448 + AluSg/x SINE Alu 79 308 -2 240 305 128 21 chr10 23528537 23528678 -122060610 - MIR SINE MIR -1 261 106 2461 93 0 0 chr10 23529116 23529428 -122059860 + AluSx SINE Alu 1 312 0 878 220 83 17 chr10 23529696 23529937 -122059351 - MIR SINE MIR -5 257 1 386 198 188 9 chr10 23530026 23530164 -122059124 - L1MD3 LINE L1 -1 8040 7890 5662 163 18 98 chr10 23530171 23530384 -122058904 - L1 LINE L1 -2362 3784 3555 2294 97 13 3 chr10 23530384 23530692 -122058596 - AluSq SINE Alu -1 312 2 5662 163 18 98 chr10 23530692 23531910 -122057378 - L1 LINE L1 -2591 3555 2469 1495 167 65 114 chr10 23531885 23532028 -122057260 - L1MC4 LINE L1 -124 7918 7770 * 1719 142 68 25 chr10 23532028 23532309 -122056979 - AluSx SINE Alu -19 293 1 1495 167 65 114 chr10 23532309 23532638 -122056650 - L1MC4 LINE L1 -272 7770 7469 31 0 0 0 chr10 23532842 23532873 -122056415 + AT_rich Low_complexity Low_complexity 1 31 0 23 54 0 0 chr10 23533722 23533759 -122055529 + AT_rich Low_complexity Low_complexity 1 37 0 3755 186 64 28 chr10 23534133 23535481 -122053807 + L1MB7 LINE L1 4769 6167 -17 1773 166 0 46 chr10 23535688 23535832 -122053456 + AluJo SINE Alu 1 150 -162 1810 174 0 7 chr10 23535832 23536131 -122053157 + AluJb SINE Alu 1 297 -15 1773 166 0 46 chr10 23536131 23536311 -122052977 + AluJo SINE Alu 150 310 -2 210 256 23 0 chr10 23536441 23536484 -122052804 - L2 LINE L2 -10 3262 3219 209 270 79 22 chr10 23536861 23536950 -122052338 + L2 LINE L2 1891 1984 -1330 877 122 24 0 chr10 23537421 23537544 -122051744 + AluJo SINE Alu 11 136 -176 301 314 194 27 chr10 23537574 23538017 -122051271 + L2 LINE L2 2154 2670 -644 441 290 53 30 chr10 23538091 23538222 -122051066 + MER119 DNA MER1_type 1 134 -449 559 244 16 0 chr10 23538223 23538350 -122050938 + MER119 DNA MER1_type 455 583 0 1639 160 68 4 chr10 23539001 23539282 -122050006 + AluJo SINE Alu 1 299 -13 2217 92 7 7 chr10 23539298 23539593 -122049695 - AluSq SINE Alu -18 295 1 288 369 49 16 chr10 23539650 23539772 -122049516 + L2 LINE L2 3138 3263 -9 1378 78 6 11 chr10 23540076 23540256 -122049032 - AluSq SINE Alu -134 179 1 353 344 46 15 chr10 23540313 23540444 -122048844 + L2 LINE L2 3138 3272 0 322 305 57 40 chr10 23540583 23540900 -122048388 + MLT1L LTR MaLR 1 389 -226 2157 104 10 3 chr10 23542197 23542495 -122046793 + AluSq SINE Alu 1 300 -13 301 283 92 38 chr10 23542703 23542838 -122046450 - L1M4 LINE L1 -861 5285 5159 1717 164 122 3 chr10 23542838 23543149 -122046139 - MER7A DNA MER2_type 0 346 1 301 283 92 38 chr10 23543149 23543241 -122046047 - L1M4 LINE L1 -987 5159 5073 2208 101 0 29 chr10 23543241 23543547 -122045741 - AluSc SINE Alu -12 297 1 301 283 92 38 chr10 23543547 23543664 -122045624 - L1M4 LINE L1 -1073 5073 4921 207 0 0 0 chr10 23544508 23544531 -122044757 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 456 67 0 0 chr10 23544732 23544792 -122044496 + (TTTA)n Simple_repeat Simple_repeat 1 60 0 1143 108 37 70 chr10 23549113 23549327 -122039961 - AluSq SINE Alu -104 209 3 194 400 0 0 chr10 23549431 23549516 -122039772 - MIR SINE MIR -130 132 48 2191 104 0 42 chr10 23549544 23549851 -122039437 - AluSg SINE Alu -14 296 3 1871 114 0 29 chr10 23550110 23550391 -122038897 - AluSg SINE Alu -9 301 29 2354 79 0 3 chr10 23551100 23551403 -122037885 + AluY SINE Alu 1 302 -9 1380 115 103 33 chr10 23551404 23551647 -122037641 - MER51B LTR ERV1 -117 260 1 2282 263 83 34 chr10 23552538 23553684 -122035604 + L2 LINE L2 2111 3313 0 965 191 5 16 chr10 23553787 23553976 -122035312 - AluJo SINE Alu -7 305 119 219 293 17 0 chr10 23553977 23554035 -122035253 + L2 LINE L2 3247 3305 -8 628 212 80 80 chr10 23554043 23554269 -122035019 + MIR SINE MIR 11 236 -26 2386 97 7 0 chr10 23554494 23554803 -122034485 + AluSx SINE Alu 1 311 -1 1988 107 0 21 chr10 23554842 23555123 -122034165 + L1PA15 LINE L1 5888 6162 -3 1819 129 0 74 chr10 23557847 23558172 -122031116 - AluJo SINE Alu -10 302 2 570 311 138 73 chr10 23559046 23559675 -122029613 + L2 LINE L2 1893 2569 -745 2069 141 3 0 chr10 23559675 23559974 -122029314 - AluJo SINE Alu -12 300 1 570 311 138 73 chr10 23559974 23560012 -122029276 + L2 LINE L2 2569 2603 -711 827 230 49 49 chr10 23560085 23560350 -122028938 - L1ME3A LINE L1 0 6170 5906 391 282 53 121 chr10 23560353 23560549 -122028739 + L2 LINE L2 2708 2872 -441 1951 108 22 7 chr10 23560549 23560826 -122028462 - AluSx SINE Alu -13 299 19 391 282 53 121 chr10 23560826 23561035 -122028253 + L2 LINE L2 2872 3093 -220 1753 150 0 36 chr10 23561200 23561507 -122027781 + AluSx SINE Alu 1 296 -16 1636 186 4 0 chr10 23561709 23561988 -122027300 + AluJb SINE Alu 1 280 -32 713 69 0 10 chr10 23561988 23562089 -122027199 + (GGAA)n Simple_repeat Simple_repeat 2 101 0 1271 212 4 4 chr10 23562610 23562869 -122026419 - AluJo SINE Alu -53 259 1 322 54 54 0 chr10 23563282 23563338 -122025950 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 1456 172 13 50 chr10 23563340 23563642 -122025646 + AluJo SINE Alu 1 291 -21 464 291 9 62 chr10 23564057 23564267 -122025021 + L2 LINE L2 2393 2591 -723 707 276 121 46 chr10 23564290 23564703 -122024585 - MLT1L LTR MaLR -8 607 164 2596 112 5 32 chr10 23564711 23565085 -122024203 + THE1B LTR MaLR 1 364 0 275 139 0 0 chr10 23565153 23565196 -122024092 + LTR67 LTR ERVL 97 139 -418 1792 142 3 70 chr10 23566247 23566389 -122022899 + AluJb SINE Alu 1 151 -161 1577 94 0 10 chr10 23566389 23566592 -122022696 + AluSg/x SINE Alu 98 298 -14 2223 111 0 0 chr10 23566593 23566881 -122022407 + AluSx SINE Alu 3 290 -22 225 0 0 0 chr10 23566888 23566913 -122022375 + (CA)n Simple_repeat Simple_repeat 2 26 0 1792 142 3 70 chr10 23566913 23567076 -122022212 + AluJb SINE Alu 157 295 -17 375 284 53 64 chr10 23567838 23568102 -122021186 + MARNA DNA Mariner 214 474 -112 1879 100 35 52 chr10 23568170 23568460 -122020828 + AluSg SINE Alu 1 285 -25 630 326 98 29 chr10 23568470 23568945 -122020343 + L2 LINE L2 2766 3271 -1 2275 114 0 0 chr10 23569271 23569570 -122019718 + AluSx SINE Alu 1 299 -13 428 312 144 0 chr10 23569693 23569895 -122019393 - MIR SINE MIR -1 261 31 1994 123 0 42 chr10 23569957 23570265 -122019023 + AluJo SINE Alu 6 300 -12 959 227 82 118 chr10 23570407 23570986 -122018302 - MLT1F1 LTR MaLR 0 567 1 891 165 0 25 chr10 23570993 23571151 -122018137 - FRAM SINE Alu -22 154 1 1857 117 75 0 chr10 23571268 23571549 -122017739 + AluSx SINE Alu 1 302 -10 282 29 0 0 chr10 23571713 23571748 -122017540 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 776 176 8 0 chr10 23571749 23571868 -122017420 - FLAM_C SINE Alu -23 120 2 1912 105 4 0 chr10 23572497 23572754 -122016534 - AluSc SINE Alu -51 258 1 22 0 0 0 chr10 23573084 23573106 -122016182 + AT_rich Low_complexity Low_complexity 1 22 0 1471 123 33 0 chr10 23573364 23573576 -122015712 - AluSg/x SINE Alu -8 304 86 1713 143 7 38 chr10 23573671 23573985 -122015303 + AluJb SINE Alu 1 305 0 2056 133 3 0 chr10 23574453 23574762 -122014526 + AluSx SINE Alu 1 310 -2 197 318 16 16 chr10 23574924 23574987 -122014301 - L2 LINE L2 0 3272 3210 2172 113 0 0 chr10 23575696 23576005 -122013283 + AluSx SINE Alu 1 309 0 234 174 0 0 chr10 23576010 23576056 -122013232 - L1 LINE L1 -1826 4320 4275 3035 212 17 11 chr10 23576123 23576830 -122012458 - L1 LINE L1 -1888 4258 3548 454 158 50 0 chr10 23576832 23576933 -122012355 - L1ME LINE L1 -725 5439 5334 1595 136 13 0 chr10 23576933 23577169 -122012119 + AluSx SINE Alu 1 239 -73 25 0 0 0 chr10 23577275 23577300 -122011988 + GC_rich Low_complexity Low_complexity 1 25 0 2137 105 3 3 chr10 23580893 23581187 -122008101 - AluSg SINE Alu -16 294 1 1085 253 59 96 chr10 23581190 23581599 -122007689 - L1ME LINE L1 -924 5222 4799 2387 76 0 0 chr10 23581599 23581901 -122007387 - AluY SINE Alu -9 302 1 1085 253 59 96 chr10 23581901 23581975 -122007313 - L1ME LINE L1 -1347 4799 4724 1888 107 0 46 chr10 23581975 23582255 -122007033 - AluSg1 SINE Alu -11 298 32 1085 253 59 96 chr10 23582255 23582434 -122006854 - L1ME LINE L1 -1422 4724 4584 351 0 0 0 chr10 23582458 23582497 -122006791 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 233 281 53 79 chr10 23582534 23582648 -122006640 - L2 LINE L2 -4 3268 3158 743 244 74 48 chr10 23582861 23583091 -122006197 - MIR SINE MIR -15 247 12 231 88 0 0 chr10 23583296 23583330 -122005958 + (TGG)n Simple_repeat Simple_repeat 2 35 0 329 261 70 35 chr10 23583417 23583532 -122005756 + ERVL LTR ERVL 1886 2004 -3760 785 288 24 71 chr10 23583583 23583778 -122005510 + L2 LINE L2 2992 3166 -147 2038 141 28 0 chr10 23583778 23584069 -122005219 - AluSx SINE Alu -13 299 1 785 288 24 71 chr10 23584069 23584210 -122005078 + L2 LINE L2 3166 3312 -1 1552 160 30 15 chr10 23584271 23584534 -122004754 - AluJo SINE Alu -41 271 5 314 255 83 78 chr10 23584587 23584791 -122004497 + ERVL LTR ERVL 2137 2341 -3423 1199 315 67 20 chr10 23585055 23585393 -122003895 + ERVL LTR ERVL 4757 5133 -631 1888 171 0 7 chr10 23585393 23585692 -122003596 - AluSx SINE Alu -14 298 2 1199 315 67 20 chr10 23585692 23585906 -122003382 + ERVL LTR ERVL 5133 5335 -429 473 158 89 10 chr10 23585949 23586050 -122003238 + FLAM_C SINE Alu 1 109 -34 216 0 0 0 chr10 23586055 23586079 -122003209 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 210 300 29 0 chr10 23586412 23586482 -122002806 + CT-rich Low_complexity Low_complexity 3 74 0 1886 189 93 56 chr10 23586972 23587377 -122001911 - MER63 DNA MER1_type 0 1061 632 2008 118 14 0 chr10 23587377 23587657 -122001631 + AluSx SINE Alu 1 284 -28 1886 189 93 56 chr10 23587657 23587755 -122001533 - MER63 DNA MER1_type -429 632 539 297 206 103 10 chr10 23587796 23587893 -122001395 + LTR67 LTR ERVL 452 557 0 1863 146 0 30 chr10 23588206 23588507 -122000781 - AluJo SINE Alu -20 292 1 251 237 0 51 chr10 23588507 23588566 -122000722 - L2 LINE L2 -12 3301 3246 21 0 0 0 chr10 23588785 23588806 -122000482 + AT_rich Low_complexity Low_complexity 1 21 0 609 211 0 17 chr10 23588806 23589172 -122000116 + (CATATA)n Simple_repeat Simple_repeat 1 359 0 308 303 11 0 chr10 23589213 23589302 -121999986 - L1MC4 LINE L1 -1339 6703 6614 * 348 264 11 0 chr10 23589232 23589319 -121999969 + L1MC4 LINE L1 6615 6702 -1340 1536 158 47 18 chr10 23589319 23589598 -121999690 - AluJo SINE Alu -25 287 1 656 258 156 54 chr10 23589712 23590316 -121998972 - MLT2F LTR ERVL -2 626 1 278 214 57 0 chr10 23590346 23590416 -121998872 + MIR SINE MIR 111 184 -78 1678 200 0 3 chr10 23590575 23590865 -121998423 + AluJo SINE Alu 1 289 -23 642 222 32 11 chr10 23591197 23591382 -121997906 + MER53 DNA DNA 1 189 0 289 196 0 0 chr10 23591889 23591945 -121997343 + L1M4 LINE L1 5157 5212 -934 1054 228 82 7 chr10 23591949 23592252 -121997036 + L1ME1 LINE L1 3434 3759 -2387 858 124 0 8 chr10 23592252 23592373 -121996915 + AluJb SINE Alu 1 120 -192 5714 202 44 23 chr10 23592411 23593285 -121996003 + L1ME1 LINE L1 3760 4613 -1553 1608 141 96 4 chr10 23593285 23593555 -121995733 + AluSx SINE Alu 1 295 -17 5714 202 44 23 chr10 23593555 23594753 -121994535 + L1ME1 LINE L1 4613 5888 -278 2238 95 3 0 chr10 23594753 23595061 -121994227 + AluSp SINE Alu 1 309 0 5714 202 44 23 chr10 23595061 23595292 -121993996 + L1ME1 LINE L1 5888 6112 -54 377 296 23 30 chr10 23596034 23596188 -121993100 - MIR SINE MIR -65 143 36 238 204 20 0 chr10 23596203 23596252 -121993036 - L2 LINE L2 -1 3312 3263 213 121 0 0 chr10 23597938 23597971 -121991317 + (A)n Simple_repeat Simple_repeat 1 33 0 2243 90 7 0 chr10 23598580 23598869 -121990419 - AluSc SINE Alu -18 291 1 205 225 0 28 chr10 23599641 23599712 -121989576 + CT-rich Low_complexity Low_complexity 3 71 0 1730 145 27 0 chr10 23600728 23600990 -121988298 + AluSx SINE Alu 44 312 0 23 33 0 0 chr10 23601083 23601113 -121988175 + AT_rich Low_complexity Low_complexity 1 30 0 927 82 0 8 chr10 23601176 23601298 -121987990 + AluSq/x SINE Alu 1 121 -191 218 31 0 31 chr10 23601298 23601330 -121987958 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 25 31 0 0 chr10 23603204 23603236 -121986052 + AT_rich Low_complexity Low_complexity 1 32 0 23 33 0 0 chr10 23605940 23605970 -121983318 + AT_rich Low_complexity Low_complexity 1 30 0 200 86 29 0 chr10 23606550 23606585 -121982703 + (TTTC)n Simple_repeat Simple_repeat 1 36 0 476 302 79 69 chr10 23608445 23609074 -121980214 - L2 LINE L2 0 3313 2597 2095 86 61 0 chr10 23609552 23609832 -121979456 + AluSx SINE Alu 1 297 -15 428 271 0 0 chr10 23610055 23610162 -121979126 + MIR SINE MIR 151 257 -5 21 0 0 0 chr10 23610678 23610699 -121978589 + AT_rich Low_complexity Low_complexity 1 21 0 502 205 98 0 chr10 23611103 23611215 -121978073 - MER91C DNA MER1_type -17 123 1 322 376 17 12 chr10 23611273 23611446 -121977842 + L2 LINE L2 2736 2909 -405 481 352 98 19 chr10 23611519 23611939 -121977349 + L2 LINE L2 2521 2973 -341 7585 27 8 0 chr10 23612407 23613638 -121975650 - L1PA3 LINE L1 0 6155 4921 628 257 137 13 chr10 23613667 23613893 -121975395 - MIR SINE MIR -7 255 2 864 182 0 25 chr10 23614222 23614381 -121974907 - AluSg/x SINE Alu -21 289 135 1033 95 19 0 chr10 23614381 23614539 -121974749 + L1MB4 LINE L1 6020 6180 0 335 118 106 24 chr10 23614630 23614715 -121974573 - L1PA16 LINE L1 0 6166 6075 21 0 0 0 chr10 23615100 23615121 -121974167 + AT_rich Low_complexity Low_complexity 1 21 0 527 157 222 0 chr10 23615197 23615305 -121973983 + FLAM_C SINE Alu 1 132 -1 216 0 0 0 chr10 23615712 23615736 -121973552 + (TTCC)n Simple_repeat Simple_repeat 1 24 0 1862 149 35 14 chr10 23616237 23616526 -121972762 + AluSx SINE Alu 1 295 -17 22 70 0 0 chr10 23616570 23616613 -121972675 + AT_rich Low_complexity Low_complexity 1 43 0 450 158 28 20 chr10 23616805 23617060 -121972228 + (TA)n Simple_repeat Simple_repeat 1 257 0 1575 173 50 20 chr10 23617282 23617582 -121971706 + AluJb SINE Alu 1 309 -3 1366 195 25 7 chr10 23617630 23617907 -121971381 + L1MB4 LINE L1 5310 5591 -589 547 174 15 8 chr10 23617907 23618018 -121971270 + L1MB4 LINE L1 6048 6180 0 235 61 30 0 chr10 23618498 23618531 -121970757 + U2 snRNA snRNA 1 34 -154 730 252 83 15 chr10 23618946 23619147 -121970141 + MIR SINE MIR 50 262 0 4707 155 21 15 chr10 23620542 23621406 -121967882 + L1MB5 LINE L1 5293 6161 -13 389 60 194 0 chr10 23623809 23623876 -121965412 - MADE1 DNA Mariner 0 80 1 838 245 45 25 chr10 23624353 23624598 -121964690 + MIR SINE MIR 2 251 -11 236 327 36 36 chr10 23625217 23625327 -121963961 - MIR SINE MIR -149 113 4 22 35 0 0 chr10 23625515 23625544 -121963744 + AT_rich Low_complexity Low_complexity 1 29 0 2331 89 3 0 chr10 23626082 23626374 -121962914 - AluSg SINE Alu -17 293 1 525 132 9 0 chr10 23626965 23627071 -121962217 + Tigger7 DNA MER2_type 2262 2368 -119 307 83 21 0 chr10 23627076 23627124 -121962164 - L1PB4 LINE L1 -8 6148 6100 231 282 56 0 chr10 23627703 23627774 -121961514 - MIR SINE MIR -71 137 63 235 91 200 0 chr10 23628277 23628332 -121960956 - L1MA8 LINE L1 -113 6178 6113 1824 170 0 27 chr10 23629311 23629611 -121959677 + AluJb SINE Alu 3 294 -18 2093 112 30 0 chr10 23630404 23630700 -121958588 - AluSq SINE Alu -8 305 1 442 211 0 9 chr10 23630811 23630925 -121958363 + Charlie5 DNA MER1_type 11 123 -2489 1545 154 67 16 chr10 23630925 23631296 -121957992 + Charlie5 DNA MER1_type 2233 2622 0 183 220 0 0 chr10 23631390 23631440 -121957848 + (CATA)n Simple_repeat Simple_repeat 2 51 0 201 244 0 0 chr10 23631440 23631481 -121957807 + (TG)n Simple_repeat Simple_repeat 1 41 0 1643 208 108 49 chr10 23631484 23631626 -121957662 + MLT1F LTR MaLR 1 133 -409 1601 158 79 0 chr10 23631626 23631904 -121957384 + AluJo SINE Alu 1 300 -12 1643 208 108 49 chr10 23631904 23632271 -121957017 + MLT1F LTR MaLR 133 540 -2 274 249 43 11 chr10 23632286 23632318 -121956970 + L1MC/D LINE L1 5691 5721 -400 198 0 0 0 chr10 23632318 23632340 -121956948 + (CAAAC)n Simple_repeat Simple_repeat 3 24 0 274 249 43 11 chr10 23632340 23632426 -121956862 + L1MC/D LINE L1 5721 5820 -301 197 196 98 0 chr10 23632646 23632697 -121956591 + L2 LINE L2 3167 3222 -91 38 22 0 0 chr10 23632785 23632830 -121956458 + AT_rich Low_complexity Low_complexity 1 45 0 2311 122 0 0 chr10 23632875 23633187 -121956101 - AluSx SINE Alu 0 312 1 305 125 0 0 chr10 23633190 23633238 -121956050 - L1PB4 LINE L1 -31 6125 6078 1175 200 200 69 chr10 23634111 23634587 -121954701 + MLT1F LTR MaLR 1 538 -4 1804 159 7 0 chr10 23634628 23634917 -121954371 - AluJo SINE Alu -21 291 1 1569 180 21 32 chr10 23635117 23635428 -121953860 - AluSx SINE Alu 0 310 3 440 195 90 132 chr10 23636065 23636288 -121953000 + Charlie8 DNA MER1_type 5 228 -2189 21 0 0 0 chr10 23637407 23637428 -121951860 + AT_rich Low_complexity Low_complexity 1 21 0 2341 97 0 3 chr10 23638183 23638483 -121950805 + AluSg1 SINE Alu 3 301 -8 203 171 0 24 chr10 23638487 23638528 -121950760 + GA-rich Low_complexity Low_complexity 2 41 0 270 308 64 0 chr10 23638662 23638740 -121950548 + L2 LINE L2 3229 3311 -2 741 289 93 14 chr10 23638792 23639148 -121950140 - MLT1L LTR MaLR -10 605 222 25 65 0 0 chr10 23639970 23640016 -121949272 + AT_rich Low_complexity Low_complexity 1 46 0 195 288 14 27 chr10 23640344 23640417 -121948871 + L2 LINE L2 3242 3313 0 1087 183 27 27 chr10 23642931 23643150 -121946138 - MER20 DNA MER1_type 0 219 1 21 36 0 0 chr10 23643832 23643860 -121945428 + AT_rich Low_complexity Low_complexity 1 28 0 293 233 29 68 chr10 23644669 23644772 -121944516 + L2 LINE L2 3174 3272 0 28 48 0 0 chr10 23647347 23647389 -121941899 + AT_rich Low_complexity Low_complexity 1 42 0 25 31 0 0 chr10 23647497 23647529 -121941759 + AT_rich Low_complexity Low_complexity 1 32 0 205 179 26 0 chr10 23648059 23648098 -121941190 + CT-rich Low_complexity Low_complexity 3 42 0 760 196 12 0 chr10 23648858 23649031 -121940257 - L1M4 LINE L1 -783 5363 5189 4340 172 43 7 chr10 23649269 23649548 -121939740 - L1MB8 LINE L1 0 6178 5911 1643 185 17 14 chr10 23649548 23649835 -121939453 - AluJo SINE Alu -24 288 1 4340 172 43 7 chr10 23649835 23650644 -121938644 - L1MB8 LINE L1 -267 5911 5041 1207 137 114 24 chr10 23650748 23650991 -121938297 - MSTA LTR MaLR 0 428 160 2199 124 11 8 chr10 23650991 23651345 -121937943 + THE1A LTR MaLR 1 355 0 1207 137 114 24 chr10 23651345 23651356 -121937932 - MSTA LTR MaLR -268 160 151 3198 187 66 52 chr10 23651988 23652025 -121937263 + L1M4 LINE L1 4215 4250 -1896 270 56 0 0 chr10 23652025 23652061 -121937227 + (CA)n Simple_repeat Simple_repeat 1 36 0 3198 187 66 52 chr10 23652061 23652129 -121937159 + L1M4 LINE L1 4250 4316 -1830 1927 118 0 69 chr10 23652129 23652435 -121936853 - AluSx SINE Alu -19 293 9 3198 187 66 52 chr10 23652435 23653274 -121936014 + L1M4 LINE L1 4316 5177 -969 1665 194 7 10 chr10 23653274 23653567 -121935721 + AluJo SINE Alu 3 294 -18 3198 187 66 52 chr10 23653567 23653625 -121935663 + L1M4 LINE L1 5177 5233 -913 2239 109 0 0 chr10 23653652 23653945 -121935343 - AluSx SINE Alu -19 293 1 1977 166 3 29 chr10 23653956 23654341 -121934947 - L1MB8 LINE L1 -1 6177 5803 746 273 77 9 chr10 23656817 23657037 -121932251 + MIR SINE MIR 10 244 -18 3109 59 5 2 chr10 23657964 23658370 -121930918 - L1PA3 LINE L1 -4 6151 5745 24 32 0 0 chr10 23661002 23661033 -121928255 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr10 23667604 23667632 -121921656 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr10 23669211 23669233 -121920055 + GC_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr10 23673558 23673579 -121915709 + GC_rich Low_complexity Low_complexity 1 21 0 209 244 13 39 chr10 23673715 23673793 -121915495 + C-rich Low_complexity Low_complexity 5 80 0 210 143 0 0 chr10 23679033 23679068 -121910220 + (GGGAGA)n Simple_repeat Simple_repeat 3 37 0 920 23 8 23 chr10 23679108 23679238 -121910050 + (TTC)n Simple_repeat Simple_repeat 2 129 0 1730 166 92 3 chr10 23679535 23679914 -121909374 - L1MD2 LINE L1 -17 6342 5930 2130 100 0 0 chr10 23680671 23680942 -121908346 - AluSc SINE Alu -14 295 25 1952 137 27 3 chr10 23681508 23681678 -121907610 - AluSx SINE Alu -10 302 121 216 0 0 0 chr10 23681678 23681702 -121907586 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1952 137 27 3 chr10 23681702 23681824 -121907464 - AluSx SINE Alu -191 121 3 303 389 78 18 chr10 23683273 23683440 -121905848 + L2 LINE L2 2924 3100 -172 236 293 13 27 chr10 23683613 23683688 -121905600 - MIR SINE MIR -119 89 16 1984 100 43 4 chr10 23684568 23684849 -121904439 + AluY SINE Alu 1 292 -19 255 61 0 0 chr10 23684871 23684904 -121904384 + (TG)n Simple_repeat Simple_repeat 2 34 0 2169 96 31 0 chr10 23685193 23685485 -121903803 - AluSq SINE Alu -11 302 2 483 302 79 69 chr10 23686299 23686928 -121902360 - L2 LINE L2 0 3313 2597 2106 86 61 0 chr10 23687406 23687686 -121901602 + AluSx SINE Alu 1 297 -15 427 271 0 0 chr10 23687909 23688016 -121901272 + MIR SINE MIR 151 257 -5 21 0 0 0 chr10 23688532 23688553 -121900735 + AT_rich Low_complexity Low_complexity 1 21 0 510 205 98 0 chr10 23688957 23689069 -121900219 - MER91C DNA MER1_type -17 123 1 323 376 17 12 chr10 23689127 23689300 -121899988 + L2 LINE L2 2736 2909 -405 484 324 77 79 chr10 23689373 23690044 -121899244 + L2 LINE L2 2521 3186 -86 40581 34 24 2 chr10 23690261 23696280 -121893008 - L1PA3 LINE L1 0 6155 1 332 274 96 38 chr10 23696533 23696690 -121892598 - L2 LINE L2 -15 3298 3133 436 267 35 161 chr10 23697340 23697800 -121891488 - L2 LINE L2 0 3272 2871 2448 58 0 16 chr10 23698968 23699280 -121890008 - AluY SINE Alu -4 307 1 2066 86 0 7 chr10 23699729 23699998 -121889290 - AluSc SINE Alu -42 267 1 204 40 0 0 chr10 23700194 23700219 -121889069 + (A)n Simple_repeat Simple_repeat 1 25 0 2053 93 43 7 chr10 23700650 23700928 -121888360 + AluSx SINE Alu 1 288 -24 229 340 93 0 chr10 23701029 23701126 -121888162 - L2 LINE L2 -11 3261 3156 1330 188 45 51 chr10 23701148 23701440 -121887848 + AluJo SINE Alu 1 290 -22 399 210 76 8 chr10 23701619 23701738 -121887550 - MLT1J LTR MaLR -384 127 1 1922 98 106 53 chr10 23701881 23701994 -121887294 - MER51B LTR ERV1 0 377 271 2356 59 0 3 chr10 23701994 23702297 -121886991 + AluY SINE Alu 1 302 -9 1922 98 106 53 chr10 23702297 23702541 -121886747 - MER51B LTR ERV1 -106 271 1 2254 269 85 31 chr10 23703371 23704579 -121884709 + L2 LINE L2 2048 3313 0 1091 174 5 15 chr10 23704677 23704873 -121884415 - AluJo SINE Alu 0 312 119 227 293 17 0 chr10 23704874 23704932 -121884356 + L2 LINE L2 3247 3305 -8 647 212 80 80 chr10 23704940 23705166 -121884122 + MIR SINE MIR 11 236 -26 2385 97 7 0 chr10 23705391 23705700 -121883588 + AluSx SINE Alu 1 311 -1 1847 107 0 21 chr10 23705739 23706020 -121883268 + L1PA15 LINE L1 5888 6162 -3 1961 90 26 48 chr10 23706130 23706440 -121882848 - AluSx SINE Alu -9 303 1 206 377 19 19 chr10 23706527 23706633 -121882655 - MIR SINE MIR -62 146 41 2173 104 0 42 chr10 23706654 23706961 -121882327 - AluSg SINE Alu -14 296 3 1879 114 0 29 chr10 23707220 23707501 -121881787 - AluSg SINE Alu -9 301 29 2483 73 0 0 chr10 23708210 23708510 -121880778 + AluY SINE Alu 1 300 -11 1877 166 13 0 chr10 23708625 23708927 -121880361 - AluSx SINE Alu -6 306 1 22 35 0 0 chr10 23709773 23709802 -121879486 + AT_rich Low_complexity Low_complexity 1 29 0 207 182 45 30 chr10 23709935 23710001 -121879287 + (TTATA)n Simple_repeat Simple_repeat 4 70 0 328 290 32 0 chr10 23710009 23710102 -121879186 + MIR3 SINE MIR 106 201 -7 25 0 0 0 chr10 23710335 23710360 -121878928 + AT_rich Low_complexity Low_complexity 1 25 0 925 127 0 0 chr10 23710446 23710572 -121878716 + AluJ SINE Alu 1 126 -186 1102 114 6 11 chr10 23710583 23710759 -121878529 + LTR9 LTR ERV1 438 612 0 2364 152 21 44 chr10 23710761 23711138 -121878150 + HUERS-P3 LTR ERV1 2 367 -8552 2569 50 0 0 chr10 23711138 23711436 -121877852 - AluY SINE Alu -13 298 1 2364 152 21 44 chr10 23711436 23711533 -121877755 + HUERS-P3 LTR ERV1 367 465 -8454 446 82 0 27 chr10 23711542 23711615 -121877673 + LTR9 LTR ERV1 457 527 -85 1233 138 0 16 chr10 23711624 23711812 -121877476 + AluJ SINE Alu 127 311 -1 1838 216 137 13 chr10 23711814 23712346 -121876942 - L1ME3A LINE L1 -121 6049 5452 6043 193 24 56 chr10 23712383 23713011 -121876277 - L1MB5 LINE L1 -8 6166 5520 1774 147 61 3 chr10 23713011 23713304 -121875984 + AluSx SINE Alu 1 310 -2 6043 193 24 56 chr10 23713304 23714562 -121874726 - L1MB5 LINE L1 -654 5520 4398 2221 106 0 0 chr10 23714562 23714871 -121874417 + AluSx SINE Alu 1 309 0 6043 193 24 56 chr10 23714871 23715696 -121873592 - L1MB5 LINE L1 -1776 4398 3548 480 189 70 59 chr10 23715698 23715799 -121873489 - L1ME3A LINE L1 -725 5439 5341 1971 148 10 0 chr10 23715799 23716089 -121873199 + AluSx SINE Alu 1 293 -19 480 189 70 59 chr10 23716089 23716226 -121873062 - L1ME3A LINE L1 -823 5341 5188 183 80 0 0 chr10 23716376 23716401 -121872887 + (CA)n Simple_repeat Simple_repeat 1 25 0 1712 144 7 25 chr10 23716463 23716740 -121872548 - AluJb SINE Alu -36 276 5 655 203 0 8 chr10 23717211 23717334 -121871954 - AluJb SINE Alu -190 122 1 1222 127 6 11 chr10 23718037 23718218 -121871070 - AluJo SINE Alu -66 246 67 348 345 21 7 chr10 23718677 23718819 -121870469 - MIR SINE MIR 0 262 119 1755 173 0 27 chr10 23719059 23719360 -121869928 - AluJb SINE Alu -19 293 1 1599 164 58 0 chr10 23719679 23719954 -121869334 - AluJo SINE Alu -17 295 5 208 143 0 0 chr10 23720351 23720386 -121868902 + (A)n Simple_repeat Simple_repeat 1 35 0 2424 68 0 0 chr10 23720551 23720846 -121868442 + AluY SINE Alu 1 295 -16 180 0 0 0 chr10 23720988 23721008 -121868280 + (TA)n Simple_repeat Simple_repeat 2 21 0 430 259 63 52 chr10 23721692 23721866 -121867422 + MIR SINE MIR 17 192 -70 321 176 0 27 chr10 23721884 23721958 -121867330 + Charlie5 DNA MER1_type 28 99 -2513 369 90 333 0 chr10 23721969 23722047 -121867241 + Charlie5 DNA MER1_type 2234 2337 -275 2161 107 3 0 chr10 23722076 23722365 -121866923 - AluSp SINE Alu -23 290 1 67 65 0 0 chr10 23722511 23722634 -121866654 + AT_rich Low_complexity Low_complexity 1 123 0 21 0 0 0 chr10 23723388 23723409 -121865879 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr10 23725798 23725820 -121863468 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr10 23727124 23727145 -121862143 + AT_rich Low_complexity Low_complexity 1 21 0 2470 60 0 3 chr10 23727632 23727931 -121861357 - AluY SINE Alu -13 298 1 200 217 109 65 chr10 23728250 23728342 -121860946 + MIR SINE MIR 30 125 -83 340 233 89 11 chr10 23728475 23728565 -121860723 - MER91B DNA MER1_type -4 186 90 570 148 0 111 chr10 23728582 23728717 -121860571 - MER91B DNA MER1_type -60 130 11 28 29 0 0 chr10 23729097 23729132 -121860156 + AT_rich Low_complexity Low_complexity 1 35 0 1002 212 146 25 chr10 23729344 23729618 -121859670 + HERV16 LTR ERVL 953 1259 -3737 932 333 36 0 chr10 23729824 23730127 -121859161 + HERV16 LTR ERVL 1263 1576 -3420 641 303 17 0 chr10 23730142 23730320 -121858968 + HERV16 LTR ERVL 1681 1861 -3135 1541 302 42 58 chr10 23730355 23730567 -121858721 + HERV16 LTR ERVL 3126 3340 -2424 1842 181 7 0 chr10 23730567 23730871 -121858417 + AluJo SINE Alu 1 306 -6 1541 302 42 58 chr10 23730871 23731485 -121857803 + HERV16 LTR ERVL 3340 3939 -1825 1086 312 66 42 chr10 23731590 23732739 -121856549 + HERV16 LTR ERVL 4071 5346 -418 374 295 36 36 chr10 23733727 23733839 -121855449 + L2 LINE L2 3161 3272 0 366 107 0 0 chr10 23734164 23734220 -121855068 + (TG)n Simple_repeat Simple_repeat 1 56 0 219 234 19 84 chr10 23737097 23737204 -121852084 + MIR SINE MIR 134 233 -29 600 252 8 78 chr10 23737218 23737460 -121851828 + MIR SINE MIR 31 255 -7 317 194 56 0 chr10 23737778 23737850 -121851438 + MIR SINE MIR 116 191 -71 242 286 168 29 chr10 23738330 23738842 -121850446 - L1 LINE L1 -1098 5048 4476 240 290 117 19 chr10 23738978 23739192 -121850096 - L1 LINE L1 -1857 4289 4055 403 327 126 6 chr10 23739289 23739607 -121849681 + L1MC4a LINE L1 5527 5882 -1926 1503 82 0 0 chr10 23739616 23739798 -121849490 + AluSx SINE Alu 1 182 -130 22 35 0 0 chr10 23739844 23739873 -121849415 + AT_rich Low_complexity Low_complexity 1 29 0 305 293 73 58 chr10 23739954 23740145 -121849143 - L1 LINE L1 -2228 3918 3725 1429 191 75 14 chr10 23740182 23740464 -121848824 - AluJb SINE Alu -12 300 2 1875 87 8 4 chr10 23740757 23740998 -121848290 + AluY SINE Alu 55 296 -15 203 189 0 0 chr10 23741021 23741058 -121848230 + T-rich Low_complexity Low_complexity 1 37 0 597 237 124 27 chr10 23741281 23741467 -121847821 + MARNA DNA Mariner 299 502 -84 549 319 58 16 chr10 23743442 23743755 -121845533 - L1ME1 LINE L1 -15 6151 5826 763 175 15 0 chr10 23745310 23745447 -121843841 - L1PB4 LINE L1 -3 6153 6015 191 0 103 0 chr10 23745500 23745529 -121843759 + A-rich Low_complexity Low_complexity 1 32 0 429 262 117 44 chr10 23745605 23745811 -121843477 + L2 LINE L2 3092 3312 -1 540 180 9 63 chr10 23746602 23746713 -121842575 - L2 LINE L2 -2 3311 3207 21 36 0 0 chr10 23747177 23747205 -121842083 + AT_rich Low_complexity Low_complexity 1 28 0 594 264 29 11 chr10 23747610 23747784 -121841504 + MER5B DNA MER1_type 2 178 0 1117 193 11 0 chr10 23747813 23748000 -121841288 - MER5A DNA MER1_type 0 189 1 207 0 0 0 chr10 23748362 23748385 -121840903 + (CA)n Simple_repeat Simple_repeat 2 24 0 203 152 0 0 chr10 23748386 23748419 -121840869 + GA-rich Low_complexity Low_complexity 2 34 0 790 227 197 65 chr10 23749061 23749493 -121839795 - MLT1H LTR MaLR -8 541 53 1169 179 104 21 chr10 23749496 23749775 -121839513 + L1ME1 LINE L1 5864 6165 -1 542 254 87 6 chr10 23749835 23750008 -121839280 - MIR3 SINE MIR -13 195 9 2635 187 55 4 chr10 23751613 23752106 -121837182 - LTR53 LTR ERVL -1 518 1 195 309 84 104 chr10 23752240 23752538 -121836750 - L2 LINE L2 -12 3260 2969 436 260 127 100 chr10 23753189 23753520 -121835768 + L2 LINE L2 2932 3271 -1 1737 228 44 52 chr10 23753531 23754172 -121835116 + L1MC5 LINE L1 7296 7931 -30 543 240 65 54 chr10 23755068 23755302 -121833986 - MIR SINE MIR -2 260 20 1639 180 0 18 chr10 23755358 23755642 -121833646 - AluJo SINE Alu -20 292 14 230 277 85 11 chr10 23756313 23756407 -121832881 - MIR SINE MIR 0 262 162 2487 191 94 49 chr10 23757297 23757968 -121831320 + L1ME3A LINE L1 5461 6161 -9 1910 149 0 14 chr10 23758039 23758356 -121830932 + AluJb SINE Alu 1 313 0 1713 207 36 17 chr10 23758710 23759068 -121830220 - MLT1A1 LTR MaLR 0 365 1 831 149 0 30 chr10 23759373 23759507 -121829781 + AluJo SINE Alu 5 134 -178 710 278 5 43 chr10 23759798 23760007 -121829281 - MIR SINE MIR -1 261 61 338 203 203 117 chr10 23760017 23760048 -121829240 - MER5B DNA MER1_type -1 177 150 1776 139 16 36 chr10 23760048 23760227 -121829061 - AluJo SINE Alu -15 297 125 2516 64 0 0 chr10 23760227 23760538 -121828750 + AluY SINE Alu 1 311 0 1776 139 16 36 chr10 23760538 23760661 -121828627 - AluJo SINE Alu -187 125 1 338 203 203 117 chr10 23760661 23760792 -121828496 - MER5B DNA MER1_type -28 150 1 331 220 229 28 chr10 23760962 23761071 -121828217 + MIR3 SINE MIR 75 205 -3 1006 184 0 0 chr10 23762404 23762572 -121826716 - FRAM SINE Alu 0 176 9 257 281 41 48 chr10 23763634 23763780 -121825508 + L1ME LINE L1 5634 5778 -343 1954 134 0 13 chr10 23764129 23764427 -121824861 - AluJo SINE Alu -16 296 3 1993 115 45 3 chr10 23765701 23765989 -121823299 + AluJo SINE Alu 1 300 -12 34 0 0 0 chr10 23765991 23766025 -121823263 + AT_rich Low_complexity Low_complexity 1 34 0 1772 142 9 64 chr10 23766549 23766879 -121822409 + AluJo SINE Alu 1 312 0 352 248 119 55 chr10 23767094 23767296 -121821992 + LTR45 LTR ERV1 372 586 -17 243 0 0 0 chr10 23768050 23768077 -121821211 + (CA)n Simple_repeat Simple_repeat 1 27 0 191 175 25 0 chr10 23768174 23768214 -121821074 - L2 LINE L2 -22 3250 3210 697 264 63 38 chr10 23768361 23768600 -121820688 - MIR SINE MIR 0 262 18 1029 164 0 0 chr10 23768731 23768890 -121820398 - FRAM SINE Alu -22 154 1 2044 120 7 0 chr10 23768903 23769186 -121820102 - AluSx SINE Alu -25 287 3 1952 141 3 3 chr10 23769842 23770139 -121819149 - AluJo SINE Alu -15 297 1 261 0 0 0 chr10 23770688 23770717 -121818571 + (GA)n Simple_repeat Simple_repeat 2 30 0 191 61 30 0 chr10 23770784 23770817 -121818471 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 263 203 14 0 chr10 23771424 23771493 -121817795 + GA-rich Low_complexity Low_complexity 2 71 0 240 269 48 62 chr10 23771583 23771676 -121817612 - MIR SINE MIR -40 222 130 1709 141 17 47 chr10 23771676 23771975 -121817313 - AluJo SINE Alu -22 290 1 240 269 48 62 chr10 23771975 23772026 -121817262 - MIR SINE MIR -132 130 80 184 272 210 25 chr10 23772168 23772249 -121817039 + L3b LINE CR1 1485 1580 -3 727 230 0 73 chr10 23772890 23773138 -121816150 - L1MC5 LINE L1 -36 7925 7696 1719 180 3 16 chr10 23773261 23773567 -121815721 + AluJo SINE Alu 2 303 -9 517 194 142 0 chr10 23773617 23773751 -121815537 - MIR SINE MIR -28 234 82 2168 142 0 0 chr10 23774561 23774872 -121814416 - AluSx SINE Alu -1 311 1 851 129 8 23 chr10 23775328 23775460 -121813828 - FLAM_C SINE Alu -3 130 1 1702 180 50 0 chr10 23776644 23776986 -121812302 + AluJb SINE Alu 1 312 0 614 271 45 40 chr10 23777537 23777593 -121811695 - MIR SINE MIR -13 249 195 1742 188 109 0 chr10 23777593 23777922 -121811366 - MLT1A1 LTR MaLR 0 365 1 614 271 45 40 chr10 23777922 23778112 -121811176 - MIR SINE MIR -67 195 2 1816 158 0 58 chr10 23778637 23778967 -121810321 - AluJo SINE Alu -1 311 1 251 314 124 0 chr10 23779469 23779590 -121809698 + L2 LINE L2 3136 3271 -1 1590 152 20 12 chr10 23779800 23780079 -121809209 - AluJb SINE Alu 0 312 32 508 328 48 32 chr10 23780260 23780510 -121808778 - MIR SINE MIR 0 262 9 304 198 37 0 chr10 23782081 23782162 -121807126 + L1ME2 LINE L1 6080 6163 -1 1355 162 142 10 chr10 23782171 23782480 -121806808 + L1MC3 LINE L1 7436 7785 0 189 0 0 0 chr10 23786576 23786597 -121802691 + (TC)n Simple_repeat Simple_repeat 1 21 0 290 225 14 0 chr10 23787051 23787122 -121802166 - MIR SINE MIR -110 152 81 198 0 0 0 chr10 23787170 23787192 -121802096 + (CACCAT)n Simple_repeat Simple_repeat 3 24 0 1792 140 52 78 chr10 23787340 23787725 -121801563 + THE1C LTR MaLR 1 375 0 648 215 134 11 chr10 23788457 23788643 -121800645 - MIR SINE MIR 0 262 54 1468 155 8 8 chr10 23788764 23789003 -121800285 - AluJb SINE Alu -69 243 5 992 205 31 35 chr10 23789977 23790066 -121799222 + MER96B DNA MER1_type? 1 89 -328 1576 142 19 91 chr10 23790066 23790384 -121798904 - AluJb SINE Alu -17 295 1 992 205 31 35 chr10 23790384 23790552 -121798736 + MER96B DNA MER1_type? 89 257 -160 267 309 64 0 chr10 23791008 23791118 -121798170 - MIR SINE MIR -33 229 113 333 374 52 22 chr10 23791486 23791810 -121797478 - L1ME LINE L1 -532 5589 5256 475 273 57 19 chr10 23842379 23842588 -121746700 - L2 LINE L2 -727 2587 2371 312 278 103 67 chr10 23842657 23842880 -121746408 - L2 LINE L2 -843 2471 2241 564 139 10 20 chr10 23842914 23843015 -121746273 + FRAM SINE Alu 72 171 -5 1711 183 0 16 chr10 23843036 23843347 -121745941 + AluJo SINE Alu 1 306 -6 2528 59 0 3 chr10 23843350 23843654 -121745634 + AluY SINE Alu 1 303 -8 1454 165 24 24 chr10 23844232 23844486 -121744802 + AluJo SINE Alu 1 254 -58 199 75 0 50 chr10 23844513 23844553 -121744735 + (GAGAA)n Simple_repeat Simple_repeat 5 42 0 498 118 227 18 chr10 23844564 23844674 -121744614 + L1MB2 LINE L1 5692 5824 -356 1116 174 20 28 chr10 23844808 23845061 -121744227 + L1MB2 LINE L1 5910 6160 -11 1088 258 139 49 chr10 23845189 23845674 -121743614 - MLT1F1 LTR MaLR -18 549 23 236 224 15 15 chr10 23845685 23845752 -121743536 + HAL1b LINE L1 317 383 -965 353 306 38 19 chr10 23845768 23845928 -121743360 + HAL1b LINE L1 450 612 -736 794 225 48 5 chr10 23845944 23846131 -121743157 + MER58A DNA MER1_type 30 224 0 283 269 59 25 chr10 23846142 23846261 -121743027 + HAL1b LINE L1 639 761 -587 349 288 83 46 chr10 23846688 23847292 -121741996 + L1 LINE L1 2197 2822 -3324 22 0 0 0 chr10 23847317 23847339 -121741949 + AT_rich Low_complexity Low_complexity 1 22 0 2171 148 22 8 chr10 23847378 23847735 -121741553 + Tigger1 DNA MER2_type 1 362 -2056 5518 73 11 3 chr10 23847735 23848633 -121740655 - L1PA8 LINE L1 -208 5964 5061 15419 134 29 12 chr10 23848733 23849836 -121739452 - L1P3 LINE L1 -2674 3787 2705 201 39 0 0 chr10 23849836 23849862 -121739426 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 15419 134 29 12 chr10 23849862 23851697 -121737591 - L1P3 LINE L1 -3756 2705 779 503 242 51 32 chr10 23851750 23851907 -121737381 + MLT1D LTR MaLR 210 369 -136 870 225 64 0 chr10 23851907 23852094 -121737194 - L1M4 LINE L1 -527 6155 5957 3145 212 76 10 chr10 23852106 23852921 -121736367 - L1M4 LINE L1 -1092 5552 4684 623 207 57 7 chr10 23852923 23853063 -121736225 + MLT1A2 LTR MaLR 228 374 0 814 244 61 0 chr10 23853064 23853277 -121736011 - L1M4 LINE L1 -2028 4616 4391 784 201 29 42 chr10 23853297 23853536 -121735752 - L1M4 LINE L1 -3097 3547 3312 * 1700 205 37 42 chr10 23853513 23853875 -121735413 - L1M4 LINE L1 -4945 1597 1236 1761 148 31 17 chr10 23853875 23854165 -121735123 - AluSx SINE Alu -18 294 1 1700 205 37 42 chr10 23854165 23854284 -121735004 - L1M4 LINE L1 -5306 1236 1118 1772 90 32 111 chr10 23854576 23854919 -121734369 - L1P3 LINE L1 -3640 2821 2506 * 9775 130 28 3 chr10 23854916 23856405 -121732883 - L1P3 LINE L1 -4935 1526 1 653 241 151 25 chr10 23856553 23856752 -121732536 - MER58A DNA MER1_type 0 224 1 213 214 0 0 chr10 23856804 23856846 -121732442 + GA-rich Low_complexity Low_complexity 4 45 0 1275 157 0 14 chr10 23856850 23857066 -121732222 + AluJo SINE Alu 100 312 0 191 379 63 0 chr10 23857121 23857216 -121732072 - MER5A DNA MER1_type 0 189 89 450 235 10 0 chr10 23857411 23857509 -121731779 + MIR SINE MIR 44 142 -66 2305 110 0 3 chr10 23857781 23858090 -121731198 - AluSx SINE Alu -4 308 1 27 0 0 0 chr10 23858313 23858340 -121730948 + AT_rich Low_complexity Low_complexity 1 27 0 1291 136 4 75 chr10 23858347 23858575 -121730713 - AluJo SINE Alu -49 263 52 2261 103 15 29 chr10 23859663 23860003 -121729285 - MER1B DNA MER1_type -2 335 1 192 182 0 0 chr10 23862121 23862165 -121727123 + (CAT)n Simple_repeat Simple_repeat 2 45 0 216 0 0 0 chr10 23862195 23862219 -121727069 + (A)n Simple_repeat Simple_repeat 1 24 0 243 88 0 0 chr10 23862298 23862332 -121726956 + (CTCA)n Simple_repeat Simple_repeat 2 35 0 185 182 18 0 chr10 23862418 23862473 -121726815 + (CA)n Simple_repeat Simple_repeat 1 56 0 385 241 31 98 chr10 23864636 23864857 -121724431 + MIR SINE MIR 11 217 -45 477 50 0 0 chr10 23865367 23865427 -121723861 + (GA)n Simple_repeat Simple_repeat 1 60 0 2207 110 10 0 chr10 23866219 23866511 -121722777 - AluSp SINE Alu -18 295 1 278 272 39 10 chr10 23867113 23867216 -121722072 + (TATG)n Simple_repeat Simple_repeat 2 107 0 1737 146 4 15 chr10 23871580 23871854 -121717434 - AluJo SINE Alu -16 296 26 2046 138 3 0 chr10 23872294 23872584 -121716704 - AluJo SINE Alu -21 291 1 200 303 15 0 chr10 23873270 23873336 -121715952 + MIR SINE MIR 81 147 -61 1668 67 9 0 chr10 23874074 23874284 -121715004 + AluY SINE Alu 100 311 0 241 289 35 35 chr10 23877765 23877907 -121711381 + MIR SINE MIR 10 151 -111 266 281 164 20 chr10 23877955 23878101 -121711187 - MIR SINE MIR -56 206 40 216 0 0 0 chr10 23878259 23878283 -121711005 + (T)n Simple_repeat Simple_repeat 1 24 0 1848 167 0 16 chr10 23878323 23878629 -121710659 + AluJb SINE Alu 1 301 -11 610 223 94 5 chr10 23879669 23879871 -121709417 + MIR SINE MIR 15 234 -28 471 227 100 27 chr10 23880007 23880157 -121709131 + MIR SINE MIR 76 236 -26 1454 88 60 9 chr10 23880269 23880484 -121708804 + MER30 DNA MER1_type 4 229 -1 594 298 44 24 chr10 23886349 23886601 -121702687 + MIR SINE MIR 2 258 -4 237 268 105 42 chr10 23887462 23887652 -121701636 + L2 LINE L2 1804 2005 -1309 211 356 10 29 chr10 23887652 23887756 -121701532 + L2 LINE L2 3149 3250 -22 257 270 96 89 chr10 23887786 23887985 -121701303 + L2 LINE L2 2109 2305 -967 8723 56 9 4 chr10 23887985 23889050 -121700238 + MER11C LTR ERVK 1 1071 0 257 270 96 89 chr10 23889050 23889600 -121699688 + L2 LINE L2 2305 3154 -118 254 350 70 14 chr10 23890080 23890223 -121699065 - MIR3 SINE MIR -25 183 33 214 286 71 41 chr10 23891188 23891286 -121698002 - L2 LINE L2 -4 3268 3168 300 83 0 0 chr10 23892342 23892390 -121696898 + (TG)n Simple_repeat Simple_repeat 2 49 0 25 51 0 0 chr10 23892500 23892539 -121696749 + AT_rich Low_complexity Low_complexity 1 39 0 462 267 48 12 chr10 23892853 23893018 -121696270 - MIR SINE MIR -6 256 86 846 257 52 0 chr10 23893322 23893532 -121695756 + Charlie1a DNA MER1_type 2 222 -1233 4459 190 64 38 chr10 23893716 23894838 -121694450 + Charlie1a DNA MER1_type 301 1451 -4 784 250 9 47 chr10 23894851 23895031 -121694257 - MER58A DNA MER1_type -2196 224 53 1745 167 43 7 chr10 23895031 23895331 -121693957 + AluJb SINE Alu 1 311 -1 784 250 9 47 chr10 23895331 23895382 -121693906 - MER58A DNA MER1_type -2367 53 2 186 175 35 53 chr10 23895414 23895471 -121693817 + L2 LINE L2 2706 2761 -553 670 258 194 25 chr10 23895485 23895799 -121693489 + L2 LINE L2 2932 3298 -15 372 328 51 15 chr10 23897669 23897864 -121691424 + MIR SINE MIR 21 222 -40 2339 108 0 0 chr10 23898356 23898662 -121690626 + AluSg SINE Alu 2 307 -3 436 226 219 7 chr10 23899254 23899400 -121689888 + MIR SINE MIR 61 237 -25 2162 101 10 17 chr10 23899500 23899797 -121689491 + AluSx SINE Alu 10 304 -8 215 331 31 54 chr10 23899807 23899937 -121689351 - L2 LINE L2 -4 3309 3183 1151 168 66 1 chr10 23899986 23900352 -121688936 + MSTB1 LTR MaLR 1 432 0 216 275 64 28 chr10 23900425 23900534 -121688754 + L2 LINE L2 1597 1709 -1605 331 267 223 5 chr10 23900639 23900841 -121688447 + L1MC5 LINE L1 7620 7865 -96 240 362 107 26 chr10 23900887 23901431 -121687857 + L2 LINE L2 1698 2285 -1029 2100 137 0 9 chr10 23902321 23902636 -121686652 + AluSx SINE Alu 1 312 0 772 209 0 0 chr10 23903066 23903205 -121686083 + FLAM_C SINE Alu 2 140 -3 783 123 0 0 chr10 23904175 23904289 -121684999 + FLAM_A SINE Alu 29 142 0 1913 118 55 14 chr10 23904529 23904818 -121684470 + AluJo SINE Alu 1 301 -11 330 132 0 0 chr10 23905383 23905436 -121683852 + (GGGAA)n Simple_repeat Simple_repeat 4 56 0 189 0 0 0 chr10 23905589 23905610 -121683678 + (A)n Simple_repeat Simple_repeat 1 21 0 1832 150 49 3 chr10 23906653 23906939 -121682349 - AluSx SINE Alu -13 299 1 2416 97 0 0 chr10 23907575 23907874 -121681414 - AluSx SINE Alu -13 299 1 610 294 57 4 chr10 23907875 23908103 -121681185 - MIR SINE MIR -17 245 6 219 114 0 0 chr10 23909662 23909697 -121679591 + (TGAA)n Simple_repeat Simple_repeat 2 36 0 23 0 0 0 chr10 23909787 23909810 -121679478 + AT_rich Low_complexity Low_complexity 1 23 0 264 159 63 48 chr10 23910843 23910906 -121678382 - MARNA DNA Mariner -182 404 341 1444 172 89 61 chr10 23910943 23911304 -121677984 + MLT1A2 LTR MaLR 1 371 -3 586 315 35 13 chr10 23911479 23911623 -121677665 - MIR SINE MIR -7 255 103 1794 167 3 20 chr10 23911623 23911917 -121677371 + AluJo SINE Alu 1 289 -23 586 315 35 13 chr10 23911917 23912004 -121677284 - MIR SINE MIR -159 103 19 669 300 16 24 chr10 23913178 23913425 -121675863 - MIR SINE MIR -11 251 7 298 229 292 0 chr10 23915049 23915193 -121674095 - MER5A DNA MER1_type 0 189 4 1968 155 0 13 chr10 23915436 23915740 -121673548 - AluSx SINE Alu -11 301 2 237 310 9 60 chr10 23916219 23916335 -121672953 - MIR SINE MIR -65 197 88 1775 145 4 4 chr10 23916523 23916785 -121672503 + AluSx SINE Alu 7 268 -44 181 269 0 19 chr10 23916843 23916895 -121672393 + MIR SINE MIR 102 152 -110 2458 73 3 0 chr10 23916966 23917268 -121672020 + AluSp SINE Alu 1 303 -10 400 200 60 0 chr10 23917746 23917846 -121671442 - MIR3 SINE MIR -11 197 92 1744 190 7 0 chr10 23919118 23919423 -121669865 + AluJo SINE Alu 1 307 -5 14012 113 12 27 chr10 23920194 23922403 -121666885 - L1P LINE L1 -3393 2753 578 360 304 8 33 chr10 23922527 23922803 -121666485 + GA-rich Low_complexity Low_complexity 1 269 0 210 191 0 0 chr10 23922816 23922858 -121666430 + GA-rich Low_complexity Low_complexity 2 43 0 207 296 0 56 chr10 23922874 23922999 -121666289 + GA-rich Low_complexity Low_complexity 2 119 0 1227 200 29 18 chr10 23923719 23923999 -121665289 - L1MB8 LINE L1 -11 6167 5885 372 273 49 7 chr10 23924981 23925124 -121664164 - MIR3 SINE MIR -25 183 35 216 271 0 17 chr10 23925368 23925427 -121663861 - L2 LINE L2 -10 3303 3246 341 20 40 0 chr10 23925669 23925719 -121663569 + AluSx SINE Alu 249 300 0 2019 153 0 3 chr10 23926679 23927023 -121662265 + AluJo SINE Alu 5 347 0 745 173 8 0 chr10 23927272 23927405 -121661883 - FLAM_A SINE Alu 0 142 9 273 268 52 10 chr10 23927414 23927511 -121661777 - L2 LINE L2 -14 3299 3199 24 0 0 0 chr10 23927689 23927713 -121661575 + AT_rich Low_complexity Low_complexity 1 24 0 229 247 49 37 chr10 23928326 23928407 -121660881 + L2 LINE L2 3230 3311 -2 294 95 0 0 chr10 23928699 23928741 -121660547 + (CA)n Simple_repeat Simple_repeat 1 42 0 1691 119 0 24 chr10 23930780 23931031 -121658257 + AluJo SINE Alu 54 298 -14 1868 136 108 0 chr10 23931514 23931837 -121657451 - MER46B DNA MER2_type -3 233 1 1740 162 0 40 chr10 23933287 23933590 -121655698 + AluJo SINE Alu 1 291 -21 362 386 78 0 chr10 23933706 23933859 -121655429 + L2 LINE L2 3087 3251 -21 498 233 35 0 chr10 23935516 23935632 -121653656 + L1MEd LINE L1 829 948 -5424 293 265 58 73 chr10 23935720 23935815 -121653473 + L1MEd LINE L1 1307 1402 -5161 1690 146 19 62 chr10 23935815 23936137 -121653151 + AluJo SINE Alu 5 312 0 293 265 58 73 chr10 23936137 23936304 -121652984 + L1MEd LINE L1 1402 1691 -4872 225 317 203 32 chr10 23937469 23938575 -121650713 - L2 LINE L2 -952 2362 1068 307 260 14 14 chr10 23938973 23939046 -121650242 - MIR3 SINE MIR -4 204 132 1327 181 113 15 chr10 23939825 23940091 -121649197 - AluJo SINE Alu -20 292 1 477 306 78 17 chr10 23941026 23941206 -121648082 - MIR SINE MIR -31 231 41 2375 110 0 0 chr10 23944129 23944439 -121644849 - AluSx SINE Alu -2 310 1 197 359 23 23 chr10 23945090 23945218 -121644070 + MIR SINE MIR 18 145 -63 597 250 165 5 chr10 23945237 23945437 -121643851 + Charlie8 DNA MER1_type 34 265 -2152 281 318 70 23 chr10 23945853 23945982 -121643306 + MLT1K LTR MaLR 436 570 -18 254 267 20 96 chr10 23946699 23946845 -121642443 + HAL1 LINE L1 10 144 -2363 283 289 44 0 chr10 23947391 23947481 -121641807 + HAL1 LINE L1 808 901 -1606 255 300 120 15 chr10 23947567 23947767 -121641521 + HAL1 LINE L1 2132 2352 -155 232 296 37 65 chr10 23947778 23947886 -121641402 + L1MC1 LINE L1 5831 5935 -1873 2925 239 50 45 chr10 23948271 23949227 -121640061 + Charlie7 DNA MER1_type 213 1173 -1439 2360 217 84 52 chr10 23949255 23950061 -121639227 + Charlie7 DNA MER1_type 1575 2406 -206 360 0 0 0 chr10 23952294 23952334 -121636954 + (A)n Simple_repeat Simple_repeat 1 40 0 3294 140 32 10 chr10 23953159 23953755 -121635533 - MER4B LTR ERV1 -1 778 1 895 227 16 11 chr10 23954759 23954944 -121634344 + AluJo SINE Alu 2 187 -125 2836 222 107 23 chr10 23955890 23955917 -121633371 + L1MC4a LINE L1 6918 6941 -994 1390 251 8 51 chr10 23955917 23956308 -121632980 + MLT1A2 LTR MaLR 1 374 0 2836 222 107 23 chr10 23956308 23957111 -121632177 + L1MC4a LINE L1 6941 7935 0 428 307 74 35 chr10 23957688 23957919 -121631369 - MIR SINE MIR -8 254 15 182 211 197 13 chr10 23958654 23958730 -121630558 + L2 LINE L2 3173 3262 -10 1538 190 17 40 chr10 23959786 23960138 -121629150 + L1MC1 LINE L1 5989 6332 -1 199 311 198 34 chr10 23960509 23960747 -121628541 - L2 LINE L2 -842 2472 2196 1483 167 36 75 chr10 23960952 23961257 -121628031 - AluJb SINE Alu -9 303 11 394 190 170 13 chr10 23961617 23961742 -121627546 + MLT1H LTR MaLR 382 503 -46 21 36 0 0 chr10 23962901 23962929 -121626359 + AT_rich Low_complexity Low_complexity 1 28 0 252 0 0 0 chr10 23964718 23964746 -121624542 + (T)n Simple_repeat Simple_repeat 1 28 0 396 243 0 0 chr10 23965854 23965928 -121623360 - MIR3 SINE MIR -21 187 114 1586 171 10 36 chr10 23966139 23966443 -121622845 - AluJo SINE Alu -6 306 11 246 100 125 0 chr10 23966933 23966973 -121622315 + MLT1K LTR MaLR 523 567 -21 307 267 75 41 chr10 23967541 23967687 -121621601 - L3b LINE CR1 -154 1429 1279 887 214 52 19 chr10 23967930 23968140 -121621148 + MER58A DNA MER1_type 7 223 -1 668 316 147 22 chr10 23968142 23968639 -121620649 + L2 LINE L2 78 636 -2678 786 224 79 92 chr10 23968658 23969114 -121620174 + L2 LINE L2 2212 2661 -653 498 243 144 58 chr10 23969253 23969545 -121619743 + L2 LINE L2 2996 3312 -1 1771 184 3 16 chr10 23969967 23970283 -121619005 + AluJo SINE Alu 1 312 0 1505 149 0 108 chr10 23970390 23970725 -121618563 - AluJo SINE Alu -13 299 1 380 36 54 0 chr10 23971619 23971675 -121617613 + (CAAAA)n Simple_repeat Simple_repeat 1 59 0 312 137 0 0 chr10 23972012 23972063 -121617225 + (TG)n Simple_repeat Simple_repeat 2 52 0 220 292 0 0 chr10 23974689 23974737 -121614551 + L2 LINE L2 3137 3184 -88 1183 163 44 10 chr10 23974962 23975165 -121614123 - AluJb SINE Alu -17 295 86 437 268 13 51 chr10 23975665 23975822 -121613466 + L2 LINE L2 2202 2352 -962 202 275 104 75 chr10 23975917 23976263 -121613025 + L2 LINE L2 2622 2977 -337 2041 114 13 24 chr10 23976826 23977124 -121612164 - AluSx SINE Alu -17 295 1 1476 195 32 3 chr10 23977522 23977804 -121611484 + AluJo SINE Alu 8 297 -15 1627 96 167 0 chr10 23978338 23978601 -121610687 + AluSx SINE Alu 4 306 0 767 163 24 0 chr10 23979666 23979789 -121609499 + FLAM_C SINE Alu 3 128 -5 448 317 40 22 chr10 23980995 23981222 -121608066 + MLT1K LTR MaLR 134 364 -224 2191 101 34 0 chr10 23981233 23981531 -121607757 + AluSq SINE Alu 6 313 0 454 339 12 6 chr10 23983409 23983577 -121605711 - MIR SINE MIR -10 252 84 296 279 106 37 chr10 23983712 23983873 -121605415 + MIR3 SINE MIR 32 203 -5 1164 97 58 0 chr10 23984016 23984171 -121605117 + AluSq SINE Alu 1 164 -149 1008 114 7 0 chr10 23984365 23984505 -121604783 + AluSg/x SINE Alu 137 277 -35 259 329 34 68 chr10 23984746 23984892 -121604396 + L2 LINE L2 3122 3262 -10 2222 109 3 3 chr10 23984892 23985196 -121604092 + AluSx SINE Alu 1 304 -8 1148 209 35 14 chr10 23985534 23985816 -121603472 + L1MC1 LINE L1 6046 6333 0 1881 142 3 30 chr10 23986053 23986355 -121602933 - AluJo SINE Alu -7 305 12 233 219 229 31 chr10 23986393 23986489 -121602799 + L2 LINE L2 3199 3313 0 257 263 66 103 chr10 23987836 23988049 -121601239 + MIR SINE MIR 48 252 -10 278 73 0 0 chr10 23988164 23988205 -121601083 - L1ME4a LINE L1 -2 6119 6079 273 247 82 10 chr10 23988293 23988390 -121600898 - L1ME4a LINE L1 -56 6065 5962 253 304 71 40 chr10 23988488 23988712 -121600576 - L1ME4a LINE L1 -296 5825 5595 1284 89 0 0 chr10 23988727 23988907 -121600381 + (TA)n Simple_repeat Simple_repeat 1 180 0 303 173 0 0 chr10 23988912 23988964 -121600324 - L1MC4 LINE L1 -1339 6703 6652 324 247 136 6 chr10 23989635 23989797 -121599491 - L1ME4a LINE L1 0 6121 5939 1797 144 0 40 chr10 23990159 23990457 -121598831 - AluJo SINE Alu -26 286 1 336 200 0 0 chr10 23990492 23990572 -121598716 + (TA)n Simple_repeat Simple_repeat 1 80 0 248 294 59 0 chr10 23990601 23990703 -121598585 - L1ME4a LINE L1 -459 5662 5555 459 0 0 0 chr10 23992569 23992620 -121596668 + (TG)n Simple_repeat Simple_repeat 2 52 0 255 93 0 0 chr10 23992638 23992681 -121596607 + (CAGA)n Simple_repeat Simple_repeat 2 44 0 2028 116 0 0 chr10 23992681 23992949 -121596339 - AluSg SINE Alu -38 272 5 309 206 0 14 chr10 23993959 23994032 -121595256 + Tigger3(Golem) DNA MER2_type 2 73 -2956 * 719 184 0 0 chr10 23994030 23994155 -121595133 + Tigger3(Golem) DNA MER2_type 2903 3027 -2 1926 139 4 0 chr10 23994802 23995076 -121594212 + AluJb SINE Alu 1 275 -37 189 196 0 0 chr10 23995851 23995897 -121593391 + (TA)n Simple_repeat Simple_repeat 2 47 0 202 368 9 9 chr10 23996076 23996182 -121593106 - MIR SINE MIR 0 262 157 270 0 0 0 chr10 23996451 23996481 -121592807 + (CA)n Simple_repeat Simple_repeat 2 31 0 28 29 0 0 chr10 23996612 23996647 -121592641 + AT_rich Low_complexity Low_complexity 1 35 0 210 323 31 8 chr10 23997017 23997147 -121592141 + C-rich Low_complexity Low_complexity 2 134 0 268 324 84 78 chr10 23998730 23999026 -121590262 + L2 LINE L2 2926 3223 -49 199 316 38 13 chr10 23999050 23999129 -121590159 - MIR SINE MIR -105 103 23 31 0 0 0 chr10 23999303 23999334 -121589954 + AT_rich Low_complexity Low_complexity 1 31 0 213 39 0 0 chr10 24000083 24000109 -121589179 + (A)n Simple_repeat Simple_repeat 1 26 0 285 241 0 0 chr10 24000162 24000216 -121589072 - L2 LINE L2 -7 3306 3253 1547 179 34 30 chr10 24000327 24000450 -121588838 + AluJo SINE Alu 1 122 -190 279 0 0 0 chr10 24000450 24000481 -121588807 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 1547 179 34 30 chr10 24000481 24000654 -121588634 + AluJo SINE Alu 122 298 -14 2333 92 0 13 chr10 24000973 24001277 -121588011 + AluSg SINE Alu 1 300 -10 232 206 14 41 chr10 24001705 24001778 -121587510 + T-rich Low_complexity Low_complexity 3 73 0 478 290 81 11 chr10 24002364 24002550 -121586738 - L2 LINE L2 -20 3293 3095 375 198 164 0 chr10 24002670 24002786 -121586502 + MER20B DNA MER1_type 590 724 -59 233 232 137 21 chr10 24003222 24003317 -121585971 + L1MC5 LINE L1 7809 7914 -47 207 0 0 0 chr10 24004179 24004202 -121585086 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 416 271 70 25 chr10 24004386 24004585 -121584703 + L1MC4a LINE L1 5635 5842 -1966 3627 168 82 50 chr10 24004674 24005763 -121583525 + L1MB7 LINE L1 5057 6184 0 24 53 0 0 chr10 24005936 24005974 -121583314 + AT_rich Low_complexity Low_complexity 1 38 0 346 254 25 8 chr10 24005985 24006107 -121583181 + L1ME4a LINE L1 5995 6118 -3 368 246 36 0 chr10 24006256 24006366 -121582922 - MLT1H1 LTR MaLR -2 553 440 409 278 66 103 chr10 24006448 24007009 -121582279 + MER34 LTR ERV1 3 542 0 1773 195 0 3 chr10 24007059 24007366 -121581922 + AluJb SINE Alu 1 306 -6 24 0 0 0 chr10 24007366 24007390 -121581898 + AT_rich Low_complexity Low_complexity 1 24 0 1300 196 81 22 chr10 24007446 24007768 -121581520 - MER58B DNA MER1_type 0 341 1 246 32 0 0 chr10 24008730 24008761 -121580527 + (CAA)n Simple_repeat Simple_repeat 2 32 0 258 271 131 8 chr10 24009052 24009174 -121580114 + MIR SINE MIR 16 152 -110 360 0 0 0 chr10 24009503 24009543 -121579745 + (CA)n Simple_repeat Simple_repeat 1 40 0 1486 181 18 78 chr10 24011080 24011411 -121577877 + AluJo SINE Alu 1 311 -1 297 362 8 16 chr10 24011831 24011958 -121577330 - L3 LINE CR1 -118 1459 1334 1438 188 39 39 chr10 24012128 24012437 -121576851 - AluJo SINE Alu -3 309 1 938 237 69 74 chr10 24012871 24013212 -121576076 + L1MA9 LINE L1 5824 6165 -147 270 116 0 0 chr10 24013212 24013255 -121576033 + (CA)n Simple_repeat Simple_repeat 2 44 0 938 237 69 74 chr10 24013255 24013267 -121576021 + L1MA9 LINE L1 6165 6176 -136 1021 254 111 3 chr10 24013267 24013574 -121575714 + MER2 DNA MER2_type 4 343 -1 938 237 69 74 chr10 24013574 24013666 -121575622 + L1MA9 LINE L1 6176 6268 -44 1932 151 0 0 chr10 24014136 24014420 -121574868 - AluJo SINE Alu -28 284 1 1444 149 23 15 chr10 24015085 24015347 -121573941 - MER2 DNA MER2_type -81 264 1 771 175 67 129 chr10 24015791 24016031 -121573257 - MIR SINE MIR -35 227 3 301 285 234 0 chr10 24016340 24016498 -121572790 - MIR SINE MIR -66 196 2 3533 116 9 17 chr10 24017593 24018119 -121571169 - MER1A DNA MER1_type -1 526 5 621 274 6 6 chr10 24019641 24019820 -121569468 - MER8 DNA MER2_type -60 179 1 305 235 169 30 chr10 24019833 24019999 -121569289 + Charlie7 DNA MER1_type 13 201 -2411 1328 200 38 9 chr10 24020097 24020417 -121568871 + Charlie7 DNA MER1_type 1506 1834 -778 794 244 161 40 chr10 24020454 24021049 -121568239 + Charlie7 DNA MER1_type 1942 2608 -4 1165 186 140 19 chr10 24021284 24021591 -121567697 + MER2 DNA MER2_type 1 344 0 1652 185 0 34 chr10 24023101 24023399 -121565889 + AluJo SINE Alu 1 288 -24 288 53 0 0 chr10 24023415 24023453 -121565835 + (CA)n Simple_repeat Simple_repeat 2 39 0 714 230 43 25 chr10 24023985 24024220 -121565068 + L1ME LINE L1 5501 5739 -382 593 75 0 0 chr10 24024250 24024330 -121564958 - MADE1 DNA Mariner 0 80 1 228 253 28 118 chr10 24026178 24026356 -121562932 - MER91A DNA MER1_type 0 196 35 431 322 45 31 chr10 24027666 24027958 -121561330 + L1MEd LINE L1 509 804 -5315 1540 295 120 33 chr10 24028480 24028791 -121560497 - L2 LINE L2 0 3313 3031 2033 142 0 10 chr10 24028791 24029100 -121560188 + AluJo SINE Alu 1 306 -6 1540 295 120 33 chr10 24029100 24029961 -121559327 - L2 LINE L2 -282 3031 2035 222 313 0 0 chr10 24030006 24030089 -121559199 - L2 LINE L2 -1417 1897 1815 790 194 31 6 chr10 24030179 24030350 -121558938 + FRAM SINE Alu 1 41 0 738 199 161 0 chr10 24030468 24030629 -121558659 + MER3 DNA MER1_type 23 209 0 296 302 116 63 chr10 24030675 24030943 -121558345 - L2 LINE L2 -1856 1458 1177 324 0 0 0 chr10 24031094 24031130 -121558158 + (A)n Simple_repeat Simple_repeat 1 36 0 265 270 238 0 chr10 24031283 24031409 -121557879 - MER5A DNA MER1_type -2 187 32 2443 103 38 22 chr10 24031494 24031863 -121557425 - THE1C LTR MaLR 0 375 1 641 306 9 0 chr10 24031961 24032177 -121557111 + L2 LINE L2 2807 3024 -289 745 177 0 0 chr10 24032673 24032786 -121556502 + FLAM_C SINE Alu 6 118 -25 633 256 98 0 chr10 24032803 24033002 -121556286 - MIR SINE MIR 0 262 40 436 223 32 0 chr10 24033549 24033643 -121555645 + Charlie4 DNA MER1_type 1851 1947 -14 352 250 21 42 chr10 24034346 24034442 -121554846 + MER5A DNA MER1_type 16 109 -80 1373 189 4 15 chr10 24034484 24034744 -121554544 - AluJo SINE Alu -45 267 11 520 324 88 0 chr10 24034891 24035095 -121554193 - MIR SINE MIR -9 253 32 23 0 0 0 chr10 24035731 24035754 -121553534 + AT_rich Low_complexity Low_complexity 1 23 0 242 257 133 9 chr10 24037177 24037282 -121552006 - MIR3 SINE MIR -13 195 78 229 184 41 0 chr10 24037682 24037731 -121551557 + L2 LINE L2 3261 3311 -2 327 25 0 0 chr10 24038581 24038621 -121550667 + (TG)n Simple_repeat Simple_repeat 2 41 0 22 80 0 0 chr10 24039025 24039075 -121550213 + GC_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr10 24039417 24039438 -121549850 + GC_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 24039551 24039579 -121549709 + GC_rich Low_complexity Low_complexity 1 28 0 267 133 0 0 chr10 24039780 24039825 -121549463 + (GGA)n Simple_repeat Simple_repeat 1 45 0 35 41 0 0 chr10 24040081 24040130 -121549158 + GC_rich Low_complexity Low_complexity 1 49 0 4015 181 40 32 chr10 24041357 24041548 -121547740 - MER6 DNA MER2_type -27 838 650 1812 168 0 13 chr10 24041548 24041858 -121547430 - AluJb SINE Alu -6 306 1 4015 181 40 32 chr10 24041858 24042254 -121547034 - MER6 DNA MER2_type -215 650 259 437 0 19 0 chr10 24042254 24042307 -121546981 + (CA)n Simple_repeat Simple_repeat 2 55 0 4015 181 40 32 chr10 24042307 24042341 -121546947 - MER6 DNA MER2_type -606 259 227 1901 164 0 10 chr10 24042341 24042651 -121546637 + AluJo SINE Alu 5 311 -1 4015 181 40 32 chr10 24042651 24042868 -121546420 - MER6 DNA MER2_type -638 227 -9 216 196 232 0 chr10 24043194 24043250 -121546038 + MIR SINE MIR 64 133 -75 1597 158 51 41 chr10 24043527 24043819 -121545469 + AluJo SINE Alu 3 297 -15 22 35 0 0 chr10 24044147 24044176 -121545112 + AT_rich Low_complexity Low_complexity 1 29 0 701 120 10 0 chr10 24044478 24044612 -121544676 - FRAM SINE Alu 0 181 47 915 179 12 0 chr10 24044704 24044866 -121544422 + FRAM SINE Alu 12 175 -1 1813 144 7 11 chr10 24045637 24045965 -121543323 - AluJb SINE Alu 0 327 1 364 210 50 8 chr10 24046966 24047085 -121542203 + L1ME4a LINE L1 5797 5920 -201 707 188 34 0 chr10 24047129 24047246 -121542042 + AluJo SINE Alu 16 136 -176 371 208 149 32 chr10 24047273 24047427 -121541861 + L1ME4a LINE L1 5939 6110 -11 24 32 0 0 chr10 24047808 24047839 -121541449 + AT_rich Low_complexity Low_complexity 1 31 0 1701 172 30 10 chr10 24047945 24048242 -121541046 + AluJo SINE Alu 1 303 -9 301 100 0 0 chr10 24048524 24048564 -121540724 - U2 snRNA snRNA -147 41 2 582 208 0 9 chr10 24048718 24048824 -121540464 - FRAM SINE Alu -80 96 1 1008 106 0 0 chr10 24049576 24049717 -121539571 - AluSg/x SINE Alu 0 310 170 227 336 182 14 chr10 24050268 24050411 -121538877 - L2 LINE L2 -2 3270 3104 1777 160 3 29 chr10 24050483 24050789 -121538499 + AluJo SINE Alu 6 303 -9 1123 144 77 0 chr10 24051002 24051197 -121538091 - AluJo SINE Alu -102 210 1 235 322 0 23 chr10 24051209 24051296 -121537992 - L1ME LINE L1 -233 5912 5828 433 198 75 0 chr10 24052175 24052281 -121537007 + MIR SINE MIR 139 252 -10 936 241 235 3 chr10 24052290 24052609 -121536679 - L2 LINE L2 0 3313 2921 1375 156 46 83 chr10 24052658 24052960 -121536328 + AluJo SINE Alu 11 301 -11 1022 201 51 33 chr10 24053052 24053266 -121536022 + MER58A DNA MER1_type 6 223 -1 467 297 104 69 chr10 24053322 24053814 -121535474 - MLT1K LTR MaLR -13 575 67 418 284 30 22 chr10 24053970 24054104 -121535184 - L1ME LINE L1 -543 5561 5427 2325 94 0 0 chr10 24054135 24054432 -121534856 - AluSg SINE Alu -13 297 1 1106 273 93 3 chr10 24054460 24054826 -121534462 - LTR16A LTR ERVL 0 450 52 2105 101 7 14 chr10 24055314 24055602 -121533686 - AluSx SINE Alu -26 286 1 334 279 78 27 chr10 24055752 24055971 -121533317 - L1ME LINE L1 -1548 4581 4352 2516 251 73 18 chr10 24056350 24057112 -121532176 - L1ME LINE L1 -1891 4238 3435 741 250 31 0 chr10 24057124 24057352 -121531936 - L1ME LINE L1 -3758 2371 2137 * 5825 181 27 30 chr10 24057333 24058251 -121531037 - L1MCa LINE L1 -1768 4796 3877 2390 81 3 0 chr10 24058251 24058547 -121530741 - AluY SINE Alu -14 297 1 5825 181 27 30 chr10 24058547 24059003 -121530285 - L1MCa LINE L1 -2687 3877 5 784 289 186 14 chr10 24059076 24059516 -121529772 + L2 LINE L2 2214 2729 -585 534 312 35 6 chr10 24059506 24059676 -121529612 + L2 LINE L2 2893 3067 -246 * 423 293 8 8 chr10 24059722 24059855 -121529433 - L1ME LINE L1 -5373 746 614 233 307 107 54 chr10 24059859 24060064 -121529224 - L1ME LINE L1 -5573 546 331 230 256 121 68 chr10 24060134 24060341 -121528947 - L1ME LINE L1 -5899 220 3 1374 193 3 49 chr10 24060429 24060537 -121528751 + AluJo SINE Alu 20 131 -181 2131 58 4 0 chr10 24060537 24060794 -121528494 - AluY SINE Alu -18 293 36 1374 193 3 49 chr10 24060794 24060990 -121528298 + AluJo SINE Alu 131 310 -2 1437 202 21 21 chr10 24061171 24061458 -121527830 - AluJo SINE Alu -25 287 1 570 222 108 121 chr10 24061474 24061849 -121527439 + L1ME1 LINE L1 5439 5825 -341 23 33 0 0 chr10 24061917 24061947 -121527341 + AT_rich Low_complexity Low_complexity 1 30 0 865 233 47 116 chr10 24061949 24062432 -121526856 + MER34B LTR ERV1 1 539 -3 1613 166 48 7 chr10 24062472 24062761 -121526527 + AluJo SINE Alu 1 301 -11 245 264 195 8 chr10 24063215 24063461 -121525827 - L1M4 LINE L1 -3650 2496 2205 738 240 90 36 chr10 24063495 24063774 -121525514 - MLT1H LTR MaLR -3 546 253 2263 103 7 0 chr10 24063817 24064117 -121525171 + AluSx SINE Alu 1 302 -10 2016 129 0 0 chr10 24064131 24064452 -121524836 + AluSx SINE Alu 5 325 0 23 0 0 0 chr10 24065519 24065542 -121523746 + AT_rich Low_complexity Low_complexity 1 23 0 2356 104 0 0 chr10 24065550 24065836 -121523452 + AluY SINE Alu 1 289 -22 225 0 0 0 chr10 24065836 24065861 -121523427 + (CA)n Simple_repeat Simple_repeat 2 26 0 2356 104 0 0 chr10 24065861 24065883 -121523405 + AluY SINE Alu 288 309 -2 1150 256 168 34 chr10 24066030 24066507 -121522781 - MLT1H LTR MaLR 0 549 9 2257 109 0 0 chr10 24066531 24066825 -121522463 + AluSx SINE Alu 2 295 -17 257 325 86 7 chr10 24067187 24067338 -121521950 + MIR3 SINE MIR 20 182 -26 21 36 0 0 chr10 24067436 24067464 -121521824 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr10 24067536 24067557 -121521731 + AT_rich Low_complexity Low_complexity 1 21 0 2077 124 0 7 chr10 24067670 24067998 -121521290 + AluSx SINE Alu 1 326 0 2543 140 40 5 chr10 24068941 24069342 -121519946 + MSTA LTR MaLR 3 417 -11 197 192 19 58 chr10 24069765 24069817 -121519471 - L2 LINE L2 -2 3311 3262 744 251 97 20 chr10 24070063 24070258 -121519030 + MLT1H LTR MaLR 1 210 -339 32286 35 1 2 chr10 24070272 24074917 -121514371 + L1PA4 LINE L1 1536 6174 0 1622 152 24 3 chr10 24075404 24075693 -121513595 - L1MA5A LINE L1 0 6297 6003 51 31 0 0 chr10 24075851 24075916 -121513372 + AT_rich Low_complexity Low_complexity 1 65 0 611 320 68 8 chr10 24076027 24076393 -121512895 + L1ME4a LINE L1 5509 5896 -225 486 0 0 0 chr10 24076728 24076782 -121512506 + (TATAA)n Simple_repeat Simple_repeat 4 57 0 489 244 115 13 chr10 24076999 24077155 -121512133 - MIR SINE MIR -56 206 35 458 261 94 20 chr10 24077508 24077673 -121511615 - MIR SINE MIR -64 144 3 239 206 0 128 chr10 24078524 24078626 -121510662 + L1MC4 LINE L1 6615 6703 -1339 601 202 9 0 chr10 24080699 24080813 -121508475 + FLAM_A SINE Alu 6 120 -22 21 0 0 0 chr10 24080821 24080842 -121508446 + AT_rich Low_complexity Low_complexity 1 21 0 1652 169 0 29 chr10 24080932 24081210 -121508078 - AluJo SINE Alu -20 292 23 225 241 0 17 chr10 24081346 24081404 -121507884 + Charlie4 DNA MER1_type 1901 1957 -4 362 267 52 26 chr10 24081709 24081825 -121507463 + MIR SINE MIR 95 213 -49 2154 117 10 0 chr10 24081874 24082172 -121507116 - AluSx SINE Alu -11 301 1 2130 67 0 0 chr10 24083560 24083813 -121505475 + AluY SINE Alu 45 297 -14 1734 162 0 88 chr10 24084144 24084520 -121504768 - MER2 DNA MER2_type -1 343 1 334 263 86 19 chr10 24084532 24084741 -121504547 - L1MC5 LINE L1 -102 7859 7637 225 0 0 0 chr10 24085022 24085047 -121504241 + (T)n Simple_repeat Simple_repeat 1 25 0 2306 103 3 3 chr10 24085082 24085394 -121503894 + AluSp SINE Alu 1 312 -1 1827 178 0 7 chr10 24085573 24085871 -121503417 + AluJb SINE Alu 1 296 -16 419 294 106 6 chr10 24085980 24086140 -121503148 + MIR SINE MIR 87 262 0 2343 97 3 3 chr10 24086547 24086857 -121502431 + AluY SINE Alu 1 310 -1 779 267 72 13 chr10 24086900 24087136 -121502152 - MIR SINE MIR 0 262 13 1831 175 0 7 chr10 24087270 24087567 -121501721 - AluJb SINE Alu -17 295 1 1830 141 0 61 chr10 24088376 24088517 -121500771 + AluJo SINE Alu 1 116 -196 2327 73 0 3 chr10 24088517 24088827 -121500461 + AluSc SINE Alu 1 309 0 1830 141 0 61 chr10 24088827 24088995 -121500293 + AluJo SINE Alu 116 293 -19 991 118 26 26 chr10 24089248 24089443 -121499845 + L1MA4 LINE L1 5997 6191 -109 498 99 129 0 chr10 24089547 24089648 -121499640 + L1MA4 LINE L1 6181 6294 -6 2216 131 0 0 chr10 24089674 24089986 -121499302 + AluSx SINE Alu 1 312 0 2296 114 0 0 chr10 24091296 24091604 -121497684 + AluSx SINE Alu 1 308 -4 721 284 64 8 chr10 24093323 24093559 -121495729 + MIR SINE MIR 14 262 0 243 0 0 0 chr10 24094273 24094300 -121494988 + (TG)n Simple_repeat Simple_repeat 2 28 0 1166 161 100 34 chr10 24094876 24095245 -121494043 - MSTC LTR MaLR 0 428 3 702 182 8 0 chr10 24095501 24095622 -121493666 - FLAM_A SINE Alu -10 132 11 318 325 149 5 chr10 24095667 24095855 -121493433 + MIR SINE MIR 5 219 -43 206 320 0 0 chr10 24095919 24095969 -121493319 - L2 LINE L2 -77 3236 3187 233 167 0 0 chr10 24096337 24096373 -121492915 - L2 LINE L2 -15 3298 3263 298 319 138 54 chr10 24096414 24096840 -121492448 - L2 LINE L2 -995 2319 1858 3977 74 10 21 chr10 24096861 24096938 -121492350 + L1PA10 LINE L1 5256 5332 -836 2608 30 7 3 chr10 24096938 24097241 -121492047 + AluY SINE Alu 1 304 -7 3977 74 10 21 chr10 24097241 24097860 -121491428 + L1PA10 LINE L1 5332 6008 -160 2566 105 3 3 chr10 24097979 24098352 -121490936 + L1PA10 LINE L1 5794 6166 -2 4964 136 20 20 chr10 24098352 24098573 -121490715 - L1PA16 LINE L1 -22 6144 5925 1378 197 55 24 chr10 24098573 24098862 -121490426 - AluJo SINE Alu -14 298 1 4964 136 20 20 chr10 24098862 24099566 -121489722 - L1PA16 LINE L1 -241 5925 5219 189 337 0 0 chr10 24099572 24099664 -121489624 - L2 LINE L2 -1434 1880 1789 737 246 140 5 chr10 24099768 24099975 -121489313 + MIR SINE MIR 28 262 0 891 248 53 0 chr10 24100881 24101107 -121488181 + MIR SINE MIR 12 249 -13 1703 148 8 0 chr10 24102491 24102741 -121486547 - AluSx SINE Alu -60 252 1 1828 113 126 92 chr10 24103012 24103426 -121485862 - MSTA LTR MaLR 0 428 1 21 95 0 0 chr10 24103560 24103623 -121485665 + AT_rich Low_complexity Low_complexity 1 63 0 2380 100 7 0 chr10 24104459 24104769 -121484519 + AluSx SINE Alu 1 312 0 263 250 12 25 chr10 24105290 24105370 -121483918 + L2 LINE L2 3161 3239 -74 823 167 0 0 chr10 24105393 24105519 -121483769 - FLAM_A SINE Alu -7 126 1 536 296 45 0 chr10 24105888 24106067 -121483221 + MIR SINE MIR 8 194 -68 396 0 0 0 chr10 24106293 24106337 -121482951 + (CA)n Simple_repeat Simple_repeat 2 45 0 255 61 0 0 chr10 24107232 24107265 -121482023 + (CA)n Simple_repeat Simple_repeat 2 34 0 2088 103 14 0 chr10 24107297 24107587 -121481701 - AluSx SINE Alu -18 294 1 387 297 69 0 chr10 24107709 24107810 -121481478 - L2 LINE L2 -11 3261 3154 1936 225 91 22 chr10 24107874 24108496 -121480792 - L1ME1 LINE L1 -323 5912 5242 759 99 8 30 chr10 24108499 24108630 -121480658 - L1MA6 LINE L1 -305 5995 5868 2038 115 7 11 chr10 24108640 24108946 -121480342 + AluSx SINE Alu 1 305 0 792 259 74 70 chr10 24108956 24109182 -121480106 - L1ME1 LINE L1 -972 5243 5019 1571 157 95 0 chr10 24109182 24109456 -121479832 + AluJb SINE Alu 5 304 -8 792 259 74 70 chr10 24109456 24109754 -121479534 - L1ME1 LINE L1 -1196 5019 4717 1586 125 42 0 chr10 24109754 24109994 -121479294 - AluSx SINE Alu -10 302 53 861 126 152 5 chr10 24110120 24110311 -121478977 - MER44D DNA MER2_type -97 512 24 4966 226 104 46 chr10 24110342 24111726 -121477562 - L1ME1 LINE L1 -1710 4505 3203 2382 103 0 0 chr10 24111726 24112028 -121477260 + AluSx SINE Alu 1 302 -10 4966 226 104 46 chr10 24112028 24113358 -121475930 - L1ME1 LINE L1 -3012 3203 1627 711 140 0 0 chr10 24113416 24113523 -121475765 + U6 snRNA snRNA 1 107 0 340 110 137 0 chr10 24113523 24113596 -121475692 + L1MB4 LINE L1 6098 6180 0 251 205 13 26 chr10 24113795 24113873 -121475415 + (TA)n Simple_repeat Simple_repeat 1 77 0 239 159 79 0 chr10 24113889 24113952 -121475336 - L1MC4 LINE L1 -196 7846 7779 2289 98 23 0 chr10 24113976 24114281 -121475007 - AluSp SINE Alu -1 312 1 5497 147 36 14 chr10 24114286 24115153 -121474135 - L1MA8 LINE L1 0 6291 5445 2034 83 72 4 chr10 24115153 24115430 -121473858 - AluSx SINE Alu -16 296 1 5497 147 36 14 chr10 24115430 24116339 -121472949 - L1MA8 LINE L1 -846 5445 4466 1046 156 39 9 chr10 24116337 24116568 -121472720 - L1MA8 LINE L1 -2527 3619 3382 * 897 221 96 63 chr10 24116573 24116967 -121472321 - L1MC4 LINE L1 -264 7778 7372 28 79 0 0 chr10 24116985 24117048 -121472240 + AT_rich Low_complexity Low_complexity 1 63 0 1203 100 12 0 chr10 24117381 24117541 -121471747 - AluSg/x SINE Alu -18 294 133 784 248 78 70 chr10 24117663 24118134 -121471154 - L1ME3A LINE L1 -5 6165 5692 941 265 30 3 chr10 24118285 24118617 -121470671 - L1ME3A LINE L1 -569 5601 5261 342 290 149 25 chr10 24119009 24119364 -121469924 - L1MC4a LINE L1 -1519 6289 5891 2397 212 36 18 chr10 24119373 24119778 -121469510 - L1ME1 LINE L1 -5 6161 5740 2301 143 20 79 chr10 24119778 24120233 -121469055 + MSTA LTR MaLR 1 428 0 2397 212 36 18 chr10 24120233 24120439 -121468849 - L1ME1 LINE L1 -426 5740 5539 1603 167 16 0 chr10 24120936 24121194 -121468094 - AluJo SINE Alu -15 297 36 180 111 0 0 chr10 24121698 24121725 -121467563 + (TATATG)n Simple_repeat Simple_repeat 3 29 0 227 257 0 14 chr10 24121732 24121806 -121467482 + L1MC4 LINE L1 6614 6686 -1356 2378 85 0 3 chr10 24121908 24122202 -121467086 + AluSg SINE Alu 1 293 -17 1845 182 7 0 chr10 24122341 24122637 -121466651 + AluJb SINE Alu 1 298 -14 500 120 0 11 chr10 24122711 24122803 -121466485 + (TCTA)n Simple_repeat Simple_repeat 4 94 0 271 146 0 36 chr10 24123206 24123261 -121466027 + MLT1H LTR MaLR 123 175 -374 240 204 37 0 chr10 24123412 24123466 -121465822 + MER63 DNA MER1_type 3 684 -378 1144 147 0 0 chr10 24123486 24123656 -121465632 + AluJo SINE Alu 126 295 -17 1410 206 43 45 chr10 24123676 24123943 -121465345 + MER63 DNA MER1_type 682 948 -113 1888 176 3 6 chr10 24123943 24124256 -121465032 - AluSx SINE Alu 0 312 1 1410 206 43 45 chr10 24124256 24124325 -121464963 + MER63 DNA MER1_type 948 1019 -42 2088 121 8 51 chr10 24124325 24124696 -121464592 + THE1A LTR MaLR 1 355 0 1410 206 43 45 chr10 24124696 24124732 -121464556 + MER63 DNA MER1_type 1019 1054 -7 709 243 7 0 chr10 24125458 24125602 -121463686 - FRAM SINE Alu -30 146 2 1855 184 7 3 chr10 24125652 24125962 -121463326 - AluJb SINE Alu -1 311 1 1906 123 0 42 chr10 24126813 24127144 -121462144 - AluSq SINE Alu 0 313 1 1534 191 0 25 chr10 24129059 24129341 -121459947 - AluJo SINE Alu -13 299 25 198 103 0 0 chr10 24131637 24131666 -121457622 + (CA)n Simple_repeat Simple_repeat 2 30 0 2787 218 34 57 chr10 24131784 24132773 -121456515 - L1ME1 LINE L1 0 6166 5215 1809 134 0 46 chr10 24132773 24133057 -121456231 - AluSx SINE Alu -7 305 35 2787 218 34 57 chr10 24133057 24133258 -121456030 - L1ME1 LINE L1 -951 5215 5011 437 195 58 0 chr10 24133267 24133354 -121455934 - MIR SINE MIR -13 249 158 6003 116 3 17 chr10 24133414 24133889 -121455399 - L1PB1 LINE L1 0 6151 5671 2149 132 0 13 chr10 24133889 24134200 -121455088 - AluSx SINE Alu -4 308 2 6003 116 3 17 chr10 24134200 24134774 -121454514 - L1PB1 LINE L1 -480 5671 5116 1705 172 67 65 chr10 24135067 24135498 -121453790 - MSTB1 LTR MaLR 0 432 1 2201 118 7 0 chr10 24136208 24136514 -121452774 + AluSx SINE Alu 4 311 -1 1842 154 0 20 chr10 24137273 24137572 -121451716 - AluJo SINE Alu -19 293 1 290 323 232 11 chr10 24138072 24138335 -121450953 - L2 LINE L2 -556 2758 2438 992 131 0 0 chr10 24138443 24138573 -121450715 + FLAM_C SINE Alu 1 130 -3 978 130 0 0 chr10 24140464 24140595 -121448693 - FLAM_C SINE Alu -2 131 1 589 272 62 36 chr10 24140980 24141175 -121448113 + MLT1I LTR MaLR 7 206 -203 2392 99 0 0 chr10 24141187 24141491 -121447797 - AluSx SINE Alu -8 304 1 293 186 68 0 chr10 24141559 24141618 -121447670 + MLT1I LTR MaLR 347 409 0 904 205 12 1 chr10 24141737 24141924 -121447364 - MLT1B LTR MaLR -14 374 173 804 159 0 16 chr10 24141942 24142068 -121447220 - FLAM_A SINE Alu -8 134 11 361 210 97 32 chr10 24142081 24142205 -121447083 - MLT1B LTR MaLR -213 177 46 2274 105 0 0 chr10 24142255 24142550 -121446738 - AluSc SINE Alu -14 295 1 1709 153 45 11 chr10 24142553 24142840 -121446448 - AluJb SINE Alu -15 297 1 23 68 0 0 chr10 24143322 24143366 -121445922 + AT_rich Low_complexity Low_complexity 1 44 0 225 0 0 0 chr10 24143523 24143548 -121445740 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 208 68 23 45 chr10 24144159 24144203 -121445085 + (CATTA)n Simple_repeat Simple_repeat 3 45 0 212 315 0 0 chr10 24145301 24145355 -121443933 + L2 LINE L2 3137 3190 -82 957 189 6 6 chr10 24145546 24145705 -121443583 - FRAM SINE Alu -4 162 4 387 0 0 0 chr10 24146667 24146710 -121442578 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 2183 101 0 0 chr10 24146713 24146990 -121442298 - AluSx SINE Alu -31 281 5 2112 176 89 5 chr10 24147309 24147701 -121441587 + MSTB1 LTR MaLR 8 432 0 289 224 82 35 chr10 24148136 24148221 -121441067 + MLT1I LTR MaLR 278 366 -43 310 194 25 6 chr10 24148221 24148306 -121440982 - L1M4c LINE L1 -4907 1373 1292 1224 201 37 15 chr10 24148425 24148698 -121440590 - MLT1C LTR MaLR 0 467 189 984 167 35 48 chr10 24148725 24148952 -121440336 - MLT1C LTR MaLR -243 224 1 6104 83 11 11 chr10 24149488 24149852 -121439436 - L1PB1 LINE L1 0 6151 5788 450 0 0 0 chr10 24149852 24149902 -121439386 + (TA)n Simple_repeat Simple_repeat 1 50 0 6104 83 11 11 chr10 24149902 24150381 -121438907 - L1PB1 LINE L1 -362 5789 5308 2393 181 135 34 chr10 24150475 24151134 -121438154 + LTR48 LTR ERV1 8 766 -21 1680 285 73 48 chr10 24151148 24151814 -121437474 + L1MEc LINE L1 289 996 -5400 2130 138 0 0 chr10 24151814 24152112 -121437176 + AluSg SINE Alu 1 298 -12 1680 285 73 48 chr10 24152112 24152562 -121436726 + L1MEc LINE L1 996 1433 -4963 3863 277 39 42 chr10 24152580 24153731 -121435557 + L1PBa LINE L1 3 1148 -5715 2114 122 66 12 chr10 24153731 24154051 -121435237 + MER1B DNA MER1_type 1 337 0 3863 277 39 42 chr10 24154051 24154547 -121434741 + L1PBa LINE L1 1148 1644 -5219 449 318 108 49 chr10 24154937 24155160 -121434128 - MIR SINE MIR -25 237 2 2184 60 0 4 chr10 24155837 24156106 -121433182 + AluY SINE Alu 43 310 -1 24 53 0 0 chr10 24156529 24156567 -121432721 + AT_rich Low_complexity Low_complexity 1 38 0 260 301 68 23 chr10 24157521 24157654 -121431634 - MIR SINE MIR -6 256 118 1926 137 57 36 chr10 24157662 24157998 -121431290 - MER61A LTR ERV1 0 343 1 22601 79 33 28 chr10 24157998 24161629 -121427659 - MER61A-int LTR ERV1 0 5217 1475 1253 81 29 48 chr10 24161629 24161814 -121427474 - AluY SINE Alu -4 307 125 261 0 0 0 chr10 24161814 24161843 -121427445 + (TG)n Simple_repeat Simple_repeat 2 30 0 1253 81 29 48 chr10 24161843 24161867 -121427421 - AluY SINE Alu -186 125 102 8353 83 8 48 chr10 24162285 24164188 -121425100 + L1PA6 LINE L1 4291 6154 0 29134 70 6 2 chr10 24164196 24167923 -121421365 + L1PA4 LINE L1 7 3745 -2401 8203 45 9 2 chr10 24167923 24169640 -121419648 + L1PA4 LINE L1 4428 6151 -4 3350 216 6 11 chr10 24169640 24170562 -121418726 - L1 LINE L1 -3393 2753 1838 15399 39 1 4 chr10 24170706 24172561 -121416727 - L1P LINE L1 -811 5335 3487 14048 138 8 23 chr10 24172558 24174834 -121414454 - L1P LINE L1 -3892 2254 13 * 11577 189 26 11 chr10 24174841 24177850 -121411438 + L1PB3 LINE L1 2743 5806 -348 1991 188 88 32 chr10 24177850 24178314 -121410974 + LTR2B LTR ERV1 1 490 0 11577 189 26 11 chr10 24178314 24178668 -121410620 + L1PB3 LINE L1 5806 6153 -1 28 0 0 0 chr10 24178668 24178696 -121410592 + AT_rich Low_complexity Low_complexity 1 28 0 443 269 13 45 chr10 24179620 24179776 -121409512 + MER77 LTR ERV1 55 205 -400 958 274 40 105 chr10 24179821 24180393 -121408895 + MER21B LTR ERV1 134 668 -195 270 86 0 0 chr10 24180385 24180420 -121408868 + MER39 LTR ERV1 627 661 -46 * 2384 153 206 6 chr10 24180419 24180890 -121408398 - MER39 LTR ERV1 -15 692 128 651 214 0 126 chr10 24180896 24181111 -121408177 - MER51C LTR ERV1 0 640 453 537 154 144 0 chr10 24181443 24181547 -121407741 - MER39 LTR ERV1 -588 119 1 331 307 92 23 chr10 24181698 24181916 -121407372 - L2 LINE L2 -340 2974 2742 2058 113 137 32 chr10 24182163 24182711 -121406577 + MER4A LTR ERV1 1 664 0 537 320 31 9 chr10 24182713 24182938 -121406350 - L2 LINE L2 -904 2410 2181 2464 116 82 64 chr10 24182973 24183411 -121405877 - MER4E LTR ERV1 0 779 334 1085 83 0 7 chr10 24183412 24183556 -121405732 - MER4E LTR ERV1 -622 144 2 2605 175 40 61 chr10 24183557 24184163 -121405125 - LTR26E LTR ERV1 -29 593 1 600 161 12 125 chr10 24184326 24184451 -121404837 + Ricksha DNA DNA 2 73 -1108 1668 156 21 7 chr10 24184451 24184734 -121404554 + AluJb SINE Alu 3 289 -23 600 161 12 125 chr10 24184734 24184776 -121404512 + Ricksha DNA DNA 73 118 -1063 1579 144 12 75 chr10 24184796 24184876 -121404412 + Ricksha DNA DNA 2174 2257 -989 2408 78 14 0 chr10 24184876 24185172 -121404116 + AluY SINE Alu 1 300 -11 1579 144 12 75 chr10 24185172 24185410 -121403878 + Ricksha DNA DNA 2257 2472 -774 2070 165 41 33 chr10 24185653 24186197 -121403091 - MLT2A2 LTR ERVL 0 554 1 2112 109 20 3 chr10 24186617 24186911 -121402377 - AluSq SINE Alu -14 299 1 229 280 37 19 chr10 24187599 24187706 -121401582 + L1M4 LINE L1 5188 5296 -850 842 158 9 59 chr10 24188259 24188480 -121400808 + AluJb SINE Alu 1 210 -102 4072 119 20 31 chr10 24188852 24189213 -121400075 - L1PB1 LINE L1 -4 6147 5796 420 71 0 0 chr10 24189213 24189269 -121400019 + (CA)n Simple_repeat Simple_repeat 2 57 0 4072 119 20 31 chr10 24189269 24189607 -121399681 - L1PB1 LINE L1 -355 5796 5456 1422 235 31 52 chr10 24189966 24190055 -121399233 - L1MC/D LINE L1 -569 5790 5701 2318 179 19 27 chr10 24190055 24190468 -121398820 + MLT2D LTR ERVL 5 414 0 1422 235 31 52 chr10 24190468 24190854 -121398434 - L1MC/D LINE L1 -658 5701 5325 1813 166 80 19 chr10 24191223 24191596 -121397692 + LTR2B LTR ERV1 95 490 0 322 275 0 0 chr10 24191606 24191686 -121397602 - L1MD2 LINE L1 -260 6099 6020 787 172 48 126 chr10 24191686 24192058 -121397230 + LTR9B LTR ERV1 1 343 -301 23 86 0 0 chr10 24192235 24192293 -121396995 + GC_rich Low_complexity Low_complexity 1 58 0 5279 92 0 9 chr10 24192474 24193166 -121396122 - L1PA6 LINE L1 0 6154 5469 910 232 29 51 chr10 24193504 24193575 -121395713 - L1MC/D LINE L1 -1373 4773 4702 2169 125 0 0 chr10 24193575 24193871 -121395417 - AluSx SINE Alu -16 296 1 910 232 29 51 chr10 24193871 24194114 -121395174 - L1MC/D LINE L1 -1444 4702 4466 388 264 39 16 chr10 24194116 24194245 -121395043 + MER20B DNA MER1_type 648 779 -4 614 288 107 55 chr10 24194266 24194631 -121394657 - L2 LINE L2 -1159 2155 1772 333 248 51 8 chr10 24194780 24194897 -121394391 + L1MA10 LINE L1 6212 6333 -1 3813 144 17 8 chr10 24196062 24197049 -121392239 - L1 LINE L1 -3503 4062 3066 26 0 0 0 chr10 24198660 24198686 -121390602 + AT_rich Low_complexity Low_complexity 1 26 0 1996 132 0 0 chr10 24198727 24199007 -121390281 + AluSx SINE Alu 1 280 -32 256 286 97 65 chr10 24199209 24199671 -121389617 - L1MC/D LINE L1 -1756 4390 3914 1632 191 24 3 chr10 24201213 24201507 -121387781 + AluJo SINE Alu 1 300 -12 726 309 100 28 chr10 24202205 24202594 -121386694 + LTR33 LTR ERVL 105 521 0 251 373 60 15 chr10 24202673 24202807 -121386481 - L2 LINE L2 -7 3265 3126 192 131 16 131 chr10 24203003 24203064 -121386224 - L2 LINE L2 -188 3084 3031 618 219 39 67 chr10 24203987 24204344 -121384944 - L1MC5 LINE L1 -32 7929 7583 * 4281 69 23 0 chr10 24204342 24204904 -121384384 + L1P LINE L1 3917 4491 -1655 310 221 295 0 chr10 24205066 24205188 -121384100 + MIR SINE MIR 76 233 -29 241 340 43 0 chr10 24207306 24207400 -121381888 - L2 LINE L2 -5 3308 3211 8385 105 3 1 chr10 24208183 24209248 -121380040 - THE1-int LTR MaLR -10 1570 501 195 69 0 0 chr10 24209248 24209277 -121380011 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 8385 105 3 1 chr10 24209277 24209337 -121379951 - THE1-int LTR MaLR -1079 501 443 338 264 169 14 chr10 24210972 24211120 -121378168 + MLT1H LTR MaLR 379 549 0 289 255 41 10 chr10 24211120 24211218 -121378070 + MLT1H-int LTR MaLR 1 101 -1634 1219 187 84 8 chr10 24211869 24212131 -121377157 + AluJo SINE Alu 1 282 -30 1570 108 31 4 chr10 24212502 24212762 -121376526 - L1PBa LINE L1 -4246 2617 2351 * 2117 199 20 11 chr10 24212753 24213302 -121375986 - L1PBa LINE L1 -5073 1790 1093 512 161 0 73 chr10 24213830 24213954 -121375334 - Tigger1 DNA MER2_type 0 2418 2304 4256 178 35 70 chr10 24213955 24215033 -121374255 + L1M1 LINE L1 11 1050 -6515 238 289 12 24 chr10 24216574 24216657 -121372631 + MLT1H LTR MaLR 210 291 -258 874 158 0 46 chr10 24218078 24218230 -121371058 - AluSq/x SINE Alu -167 145 1 1613 156 22 0 chr10 24218230 24218505 -121370783 - L1M4 LINE L1 -374 5810 5530 1579 217 27 12 chr10 24218505 24219056 -121370232 - L1MCa LINE L1 -4320 2287 1538 2539 134 70 20 chr10 24219804 24220245 -121369043 + LTR32 LTR ERVL 9 471 0 198 302 72 22 chr10 24220249 24220388 -121368900 + MIR SINE MIR 105 250 -12 482 198 12 0 chr10 24220574 24220655 -121368633 - MER44D DNA MER2_type -623 82 1 * 3470 90 26 80 chr10 24220653 24221113 -121368175 + MER41A LTR ERV1 1 425 -129 1719 133 0 16 chr10 24221113 24221361 -121367927 - AluSx SINE Alu -63 249 6 3470 90 26 80 chr10 24221361 24221477 -121367811 + MER41A LTR ERV1 425 546 -8 355 271 129 14 chr10 24221791 24221931 -121367357 - MIR SINE MIR -59 203 48 940 103 7 44 chr10 24221966 24222102 -121367186 + FRAM SINE Alu 16 146 -30 2846 181 42 9 chr10 24222202 24222756 -121366532 + LTR49 LTR ERV1 1 572 -23 477 0 0 0 chr10 24223229 24223282 -121366006 + (T)n Simple_repeat Simple_repeat 1 53 0 890 117 86 12 chr10 24223295 24223458 -121365830 + LTR49 LTR ERV1 421 595 0 385 205 51 0 chr10 24223459 24223537 -121365751 + MER92B LTR ERV1 62 143 -493 1463 150 59 4 chr10 24223538 24223791 -121365497 + LTR24C LTR ERV1 1 267 -368 492 148 0 83 chr10 24224312 24224420 -121364868 - L1PA11 LINE L1 0 6174 6076 1756 128 103 36 chr10 24224423 24224781 -121364507 + LTR24C LTR ERV1 251 632 -3 584 178 9 89 chr10 24224798 24225011 -121364277 + MER92B LTR ERV1 152 347 -289 387 281 25 8 chr10 24225417 24225538 -121363750 + L2 LINE L2 3159 3281 -32 320 214 25 31 chr10 24226051 24226210 -121363078 + (TA)n Simple_repeat Simple_repeat 1 158 0 476 268 52 30 chr10 24226406 24226675 -121362613 - L1M4 LINE L1 -935 5211 4937 416 201 48 54 chr10 24226682 24226857 -121362431 - MLT1I LTR MaLR 0 409 284 512 284 113 37 chr10 24227093 24227666 -121361622 - L1M4 LINE L1 -1214 4932 4316 1549 168 9 65 chr10 24228109 24228430 -121360858 + AluJo SINE Alu 1 303 -9 262 290 170 0 chr10 24229006 24229106 -121360182 + L2 LINE L2 3138 3254 -18 306 290 65 71 chr10 24230109 24230278 -121359010 + MER5B DNA MER1_type 4 171 -7 1822 197 57 20 chr10 24230797 24231147 -121358141 + MLT1A1 LTR MaLR 1 363 -2 1619 218 11 84 chr10 24231976 24232227 -121357061 + MLT1C LTR MaLR 25 226 -241 2549 93 41 11 chr10 24232227 24232591 -121356697 - THE1C LTR MaLR 0 375 1 1619 218 11 84 chr10 24232591 24232817 -121356471 + MLT1C LTR MaLR 226 467 0 380 144 89 67 chr10 24233333 24233423 -121355865 - L1MC/D LINE L1 -428 5814 5723 1252 171 28 116 chr10 24233425 24233582 -121355706 - MER63B DNA MER1_type -731 331 222 1869 179 127 24 chr10 24233582 24234040 -121355248 + LTR22 LTR ERVK 1 505 -4 1252 171 28 116 chr10 24234040 24234245 -121355043 - MER63B DNA MER1_type -840 222 1 2202 123 40 40 chr10 24234326 24234701 -121354587 + THE1C LTR MaLR 1 375 0 239 180 0 20 chr10 24235228 24235278 -121354010 - MLT1I LTR MaLR -61 329 281 691 253 119 16 chr10 24235559 24235753 -121353535 + MIR SINE MIR 49 262 0 237 65 0 0 chr10 24236016 24236047 -121353241 + (GGA)n Simple_repeat Simple_repeat 1 31 0 1142 180 83 80 chr10 24236352 24236713 -121352575 - MLT1A2 LTR MaLR 0 374 13 207 69 0 0 chr10 24237617 24237646 -121351642 + (TTTTA)n Simple_repeat Simple_repeat 1 29 0 1172 53 0 0 chr10 24237651 24237803 -121351485 - L1PA5 LINE L1 -40 6114 5963 2372 232 41 5 chr10 24237905 24238543 -121350745 - L1ME1 LINE L1 -43 6123 5463 2069 138 0 10 chr10 24238705 24239003 -121350285 + AluSx SINE Alu 1 295 -17 1355 122 105 8 chr10 24239947 24240194 -121349094 - MSTA LTR MaLR 0 428 158 2148 188 62 9 chr10 24240332 24240885 -121348403 - L1PBa LINE L1 -4584 1620 1039 4996 163 25 13 chr10 24240929 24241840 -121347448 - L1PBa LINE L1 -5281 923 2 277 214 143 32 chr10 24242007 24242133 -121347155 - L2 LINE L2 -774 2540 2401 633 265 41 103 chr10 24242619 24243223 -121346065 + L1MEc LINE L1 310 876 -5520 * 1132 237 49 20 chr10 24243215 24243700 -121345588 + L1MEc LINE L1 2096 2562 -3653 489 201 0 29 chr10 24243708 24243847 -121345441 + L1M4 LINE L1 4388 4522 -1624 251 133 22 0 chr10 24243855 24243900 -121345388 + L1ME LINE L1 5530 5575 -587 1960 120 10 10 chr10 24243920 24244211 -121345077 - AluJb SINE Alu -21 291 1 2832 117 28 9 chr10 24244214 24244675 -121344613 + Tigger1 DNA MER2_type 1799 2268 -150 802 223 7 0 chr10 24244677 24244825 -121344463 + AluJo SINE Alu 3 151 -161 509 146 10 0 chr10 24245010 24245106 -121344182 + L1M4 LINE L1 4615 4711 -1435 1577 175 0 15 chr10 24245107 24245370 -121343918 + AluJo SINE Alu 1 259 -53 277 345 82 0 chr10 24245505 24245615 -121343673 - MER91C DNA MER1_type -13 127 9 2197 202 42 49 chr10 24245997 24246612 -121342676 + L1MC4a LINE L1 7006 7616 -192 1695 208 0 16 chr10 24247720 24248028 -121341260 + AluJb SINE Alu 1 303 -9 250 396 135 5 chr10 24248956 24249163 -121340125 + L2 LINE L2 2815 3048 -224 2701 88 3 8 chr10 24249390 24249754 -121339534 - THE1B LTR MaLR 0 364 3 1909 159 10 7 chr10 24250710 24251005 -121338283 - AluSx SINE Alu -16 296 1 350 181 72 0 chr10 24251790 24251873 -121337415 + FLAM_A SINE Alu 40 128 -5 2542 111 3 19 chr10 24252017 24252387 -121336901 - THE1B LTR MaLR 0 364 1 11148 98 12 25 chr10 24252387 24253987 -121335301 - THE1B-int LTR MaLR 0 1580 1 2451 126 0 21 chr10 24253987 24254359 -121334929 - THE1B LTR MaLR 0 364 1 21 57 0 0 chr10 24254983 24255018 -121334270 + AT_rich Low_complexity Low_complexity 1 35 0 2538 99 35 17 chr10 24255248 24255651 -121333637 - MSTA LTR MaLR 0 428 19 1669 175 68 11 chr10 24257446 24257800 -121331488 - MLT1A2 LTR MaLR 0 374 1 674 124 0 0 chr10 24258597 24258694 -121330594 - FRAM SINE Alu -55 121 25 327 113 0 13 chr10 24258734 24258806 -121330482 + Alu SINE Alu 247 301 -1 213 65 0 0 chr10 24258847 24258878 -121330410 + (TG)n Simple_repeat Simple_repeat 2 32 0 2401 84 0 3 chr10 24260771 24261079 -121328209 + AluSc SINE Alu 1 307 -2 1166 158 36 10 chr10 24261372 24261568 -121327720 - AluJo SINE Alu -23 289 89 1369 206 55 98 chr10 24261859 24262093 -121327195 + L1MC5 LINE L1 6640 6882 -1079 1426 205 74 37 chr10 24262093 24262391 -121326897 + AluJo SINE Alu 1 309 -3 1369 206 55 98 chr10 24262391 24262769 -121326519 + L1MC5 LINE L1 6882 7226 -735 234 291 78 28 chr10 24262806 24262947 -121326341 + L1MC4 LINE L1 7328 7475 -567 956 192 8 79 chr10 24263129 24263494 -121325794 - L1MC3 LINE L1 0 7785 7324 1831 172 3 0 chr10 24263494 24263784 -121325504 - AluJo SINE Alu -21 291 1 956 192 8 79 chr10 24263784 24263895 -121325393 - L1MC3 LINE L1 -461 7324 7207 282 240 0 90 chr10 24263912 24264012 -121325276 - MLT1F1 LTR MaLR -442 125 35 4364 235 63 24 chr10 24264012 24265397 -121323891 - L1MC3 LINE L1 -688 7097 5659 6307 43 4 1 chr10 24265401 24266205 -121323083 - L1PA6 LINE L1 -5 6149 5344 5492 249 54 24 chr10 24266217 24268306 -121320982 + L1ME LINE L1 3272 5418 -758 338 272 53 105 chr10 24268417 24268645 -121320643 + MIR SINE MIR 11 226 -36 277 332 14 120 chr10 24268636 24268853 -121320435 - L2 LINE L2 -114 3158 2965 * 543 351 137 25 chr10 24268943 24269576 -121319712 - L2 LINE L2 -498 2816 2113 564 149 0 0 chr10 24269618 24269705 -121319583 + FLAM_A SINE Alu 26 112 -30 437 337 116 42 chr10 24269741 24270147 -121319141 - L2 LINE L2 -1258 2056 1621 225 294 0 35 chr10 24270394 24270479 -121318809 - LTR33A LTR ERVL -144 379 298 199 245 19 0 chr10 24270582 24270635 -121318653 + L2 LINE L2 3259 3312 -1 192 173 0 77 chr10 24271811 24271863 -121317425 - MIR SINE MIR -60 148 101 327 309 46 13 chr10 24272106 24272258 -121317030 + L1ME LINE L1 5617 5773 -348 2187 118 13 0 chr10 24272459 24272763 -121316525 + AluSx SINE Alu 1 308 -4 423 132 0 0 chr10 24272767 24272835 -121316453 + (GA)n Simple_repeat Simple_repeat 2 69 0 278 59 0 0 chr10 24272835 24272869 -121316419 + (GGAAA)n Simple_repeat Simple_repeat 2 35 0 246 178 110 0 chr10 24273079 24273152 -121316136 + L1ME4a LINE L1 6029 6109 -12 2053 109 0 11 chr10 24273263 24273548 -121315740 - AluSx SINE Alu -30 282 1 28 29 0 0 chr10 24274026 24274061 -121315227 + AT_rich Low_complexity Low_complexity 1 35 0 2269 82 10 3 chr10 24274629 24274923 -121314365 - AluSg SINE Alu -14 296 1 395 271 19 19 chr10 24275233 24275340 -121313948 - L2 LINE L2 -22 3291 3185 354 316 46 40 chr10 24276536 24276710 -121312578 + MIR SINE MIR 61 235 -27 1991 81 0 0 chr10 24277339 24277616 -121311672 + AluY SINE Alu 39 315 0 517 276 99 70 chr10 24278272 24278515 -121310773 + MIR SINE MIR 13 262 0 21 0 0 0 chr10 24279057 24279078 -121310210 + AT_rich Low_complexity Low_complexity 1 21 0 315 219 55 0 chr10 24279078 24279151 -121310137 - MER3 DNA MER1_type -131 78 2 24 67 0 0 chr10 24279371 24279416 -121309872 + AT_rich Low_complexity Low_complexity 1 45 0 676 172 18 123 chr10 24279793 24279872 -121309416 - MER3 DNA MER1_type -5 204 118 749 153 0 0 chr10 24279872 24279990 -121309298 + FLAM_C SINE Alu 1 118 -15 676 172 18 123 chr10 24279990 24280137 -121309151 - MER3 DNA MER1_type -91 118 2 1996 142 3 0 chr10 24280605 24280900 -121308388 - AluJb SINE Alu -16 296 1 25 0 0 0 chr10 24280900 24280925 -121308363 + AT_rich Low_complexity Low_complexity 1 25 0 936 314 118 24 chr10 24281591 24282418 -121306870 - L2 LINE L2 0 3313 2401 695 272 44 92 chr10 24282904 24283500 -121305788 + L1ME2 LINE L1 310 876 -5520 * 1132 237 49 20 chr10 24283492 24283977 -121305311 + L1ME2 LINE L1 2096 2562 -3653 489 201 0 29 chr10 24283985 24284124 -121305164 + L1ME2 LINE L1 4457 4591 -1624 1799 210 39 58 chr10 24284132 24284187 -121305101 + L1ME2 LINE L1 5599 5653 -578 2033 147 3 0 chr10 24284187 24284479 -121304809 - AluJo SINE Alu -15 297 5 1799 210 39 58 chr10 24284479 24285075 -121304213 + L1ME2 LINE L1 5653 6214 -17 275 216 0 0 chr10 24285238 24285289 -121303999 + L2 LINE L2 3263 3313 0 478 369 66 26 chr10 24285362 24285939 -121303349 - L2 LINE L2 -1824 1490 891 1953 228 84 20 chr10 24286255 24286813 -121302475 + L1ME3 LINE L1 5462 6055 -107 320 271 134 53 chr10 24286885 24287147 -121302141 - L1MDa LINE L1 -3934 2281 2040 23 68 0 0 chr10 24287154 24287198 -121302090 + AT_rich Low_complexity Low_complexity 1 44 0 2259 100 0 3 chr10 24287348 24287647 -121301641 + AluSx SINE Alu 1 298 -14 223 229 157 0 chr10 24288249 24288319 -121300969 - MIR3 SINE MIR -3 205 125 323 295 22 79 chr10 24289412 24289551 -121299737 - MIR SINE MIR -12 250 120 993 147 84 0 chr10 24290216 24290406 -121298882 + L1MC3 LINE L1 6892 7097 -688 246 326 0 11 chr10 24290406 24290498 -121298790 + MLT1F1 LTR MaLR 35 125 -442 408 149 68 0 chr10 24290498 24290572 -121298716 + L1MC3 LINE L1 7190 7268 -517 822 154 0 23 chr10 24290577 24290707 -121298581 + AluJb SINE Alu 3 129 -183 1788 174 0 31 chr10 24290721 24291042 -121298246 + AluJb SINE Alu 1 311 -1 2107 182 88 15 chr10 24291047 24291524 -121297764 + L1MC3 LINE L1 7264 7775 -10 6354 246 59 25 chr10 24292249 24294636 -121294652 + L1MEc LINE L1 74 2380 -3835 2499 67 0 0 chr10 24294636 24294934 -121294354 - AluY SINE Alu -13 298 1 6354 246 59 25 chr10 24294934 24295546 -121293742 + L1MEc LINE L1 2380 2970 -3245 2024 132 16 3 chr10 24295546 24295849 -121293439 + AluSc SINE Alu 1 307 -2 6354 246 59 25 chr10 24295849 24296598 -121292690 + L1MEc LINE L1 2970 3941 -2274 1592 218 68 60 chr10 24296598 24297099 -121292189 + MLT1D LTR MaLR 1 505 0 6354 246 59 25 chr10 24297099 24297416 -121291872 + L1MEc LINE L1 3941 4246 -1969 326 168 253 0 chr10 24297496 24297591 -121291697 - L1ME2 LINE L1 -274 5890 5772 1580 200 53 43 chr10 24297592 24298018 -121291270 - L1ME2 LINE L1 -543 5623 5197 294 215 66 33 chr10 24298014 24298074 -121291214 - L1MC2 LINE L1 -1 6343 6286 * 1960 142 0 40 chr10 24298074 24298398 -121290890 + AluJb SINE Alu 1 311 -1 294 215 66 33 chr10 24298398 24298458 -121290830 - L1MC2 LINE L1 -58 6286 6219 2773 171 37 4 chr10 24298474 24298965 -121290323 - MLT2B2 LTR ERVL 0 515 9 480 312 139 14 chr10 24299034 24299329 -121289959 - L2 LINE L2 -15 3298 2967 1838 106 8 0 chr10 24300064 24300309 -121288979 + AluSx SINE Alu 47 293 -19 274 200 22 60 chr10 24300377 24300562 -121288726 + (TATAA)n Simple_repeat Simple_repeat 1 178 0 726 216 12 6 chr10 24301250 24301412 -121287876 - MIR SINE MIR 0 262 100 1055 151 0 35 chr10 24301597 24301769 -121287519 + AluJb SINE Alu 127 292 -20 356 170 17 2 chr10 24302337 24302406 -121286882 + MIR SINE MIR 112 181 -27 2135 115 0 7 chr10 24302417 24302721 -121286567 - AluSx SINE Alu 0 302 1 213 39 0 0 chr10 24303841 24303867 -121285421 + (CA)n Simple_repeat Simple_repeat 2 27 0 1651 169 142 17 chr10 24304388 24304803 -121284485 - MLT1C LTR MaLR 0 467 1 296 280 93 0 chr10 24306655 24306762 -121282526 - MIR SINE MIR -77 185 69 284 277 39 54 chr10 24306935 24307065 -121282223 - MIR SINE MIR -63 199 72 1155 244 29 59 chr10 24307179 24307308 -121281980 + L1M4 LINE L1 4062 4193 -1953 2420 88 0 0 chr10 24307308 24307586 -121281702 + AluSc SINE Alu 1 281 -28 288 0 0 0 chr10 24307586 24307618 -121281670 + (CA)n Simple_repeat Simple_repeat 1 32 0 2420 88 0 0 chr10 24307618 24307645 -121281643 + AluSc SINE Alu 280 306 -3 1155 244 29 59 chr10 24307645 24307957 -121281331 + L1M4 LINE L1 4193 4490 -1656 1430 271 137 51 chr10 24308037 24308135 -121281153 - L1ME LINE L1 -4141 2120 2032 2144 117 3 7 chr10 24308135 24308435 -121280853 - AluSx SINE Alu -13 299 1 1430 271 137 51 chr10 24308435 24309899 -121279389 - L1ME LINE L1 -4229 2032 428 439 223 11 0 chr10 24310121 24310215 -121279073 - L1ME LINE L1 -5606 464 370 250 204 0 0 chr10 24310227 24310271 -121279017 - MLT2D LTR ERVL -8 445 402 1845 124 55 66 chr10 24310295 24310674 -121278614 - THE1C LTR MaLR 0 375 1 1722 191 29 3 chr10 24310710 24311024 -121278264 - MLT2D LTR ERVL -62 352 31 800 214 73 0 chr10 24311033 24311211 -121278077 - ERVL-D LTR ERVL 0 5764 5574 * 1689 108 60 4 chr10 24311208 24311459 -121277829 - ERVL-D LTR ERVL -975 4789 4525 1738 156 45 7 chr10 24312194 24312483 -121276805 - AluJb SINE Alu -12 300 1 501 341 72 43 chr10 24313956 24314542 -121274746 - L2 LINE L2 -337 2977 2375 4715 178 35 11 chr10 24314573 24315129 -121274159 - L1MB3 LINE L1 -1 6182 5641 2203 119 7 0 chr10 24315129 24315432 -121273856 - AluSx SINE Alu -4 308 4 4715 178 35 11 chr10 24315432 24316125 -121273163 - L1MB3 LINE L1 -542 5641 4903 202 343 14 14 chr10 24316130 24316203 -121273085 + MIR3 SINE MIR 130 202 -6 1707 160 0 18 chr10 24316706 24316988 -121272300 + AluJo SINE Alu 1 277 -35 378 0 0 0 chr10 24316988 24317030 -121272258 + (TAA)n Simple_repeat Simple_repeat 1 42 0 2375 94 0 0 chr10 24317444 24317752 -121271536 - AluY SINE Alu -3 308 1 462 291 39 22 chr10 24317878 24318060 -121271228 - LTR33 LTR ERVL -2 519 335 2030 131 3 0 chr10 24318323 24318637 -121270651 - AluSx SINE Alu 0 315 1 419 347 107 44 chr10 24318667 24318974 -121270314 - HAL1b LINE L1 -577 771 485 2061 117 0 32 chr10 24318974 24319283 -121270005 + AluSq SINE Alu 4 302 -11 419 347 107 44 chr10 24319283 24319592 -121269696 - HAL1b LINE L1 -863 485 116 336 349 102 29 chr10 24319892 24320443 -121268845 + L2 LINE L2 1706 2296 -1018 2027 147 44 6 chr10 24321880 24322241 -121267047 - THE1C LTR MaLR 0 375 1 22 0 0 0 chr10 24323147 24323169 -121266119 + AT_rich Low_complexity Low_complexity 1 22 0 31 0 0 0 chr10 24324432 24324463 -121264825 + AT_rich Low_complexity Low_complexity 1 31 0 191 315 81 36 chr10 24324624 24324735 -121264553 + L3 LINE CR1 1060 1175 -402 1921 114 0 11 chr10 24325800 24326072 -121263216 + AluSx SINE Alu 10 278 -34 189 0 0 0 chr10 24326075 24326096 -121263192 + (CAAA)n Simple_repeat Simple_repeat 1 21 0 2404 88 0 0 chr10 24326753 24327060 -121262228 - AluY SINE Alu -4 307 1 442 297 39 22 chr10 24327186 24327368 -121261920 - LTR33 LTR ERVL -2 519 335 2030 131 3 0 chr10 24327631 24327945 -121261343 - AluSx SINE Alu 0 315 1 419 347 107 44 chr10 24327975 24328282 -121261006 - HAL1b LINE L1 -577 771 485 1992 119 0 35 chr10 24328282 24328592 -121260696 + AluSq SINE Alu 4 302 -11 419 347 107 44 chr10 24328592 24328901 -121260387 - HAL1b LINE L1 -863 485 116 336 349 102 29 chr10 24329201 24329752 -121259536 + L2 LINE L2 1706 2296 -1018 2027 147 44 6 chr10 24331189 24331550 -121257738 - THE1C LTR MaLR 0 375 1 22 0 0 0 chr10 24332457 24332479 -121256809 + AT_rich Low_complexity Low_complexity 1 22 0 31 0 0 0 chr10 24333743 24333774 -121255514 + AT_rich Low_complexity Low_complexity 1 31 0 191 315 81 36 chr10 24333935 24334046 -121255242 + L3 LINE CR1 1060 1175 -402 1882 114 0 15 chr10 24335111 24335384 -121253904 + AluSx SINE Alu 10 278 -34 189 0 0 0 chr10 24335387 24335408 -121253880 + (CAAA)n Simple_repeat Simple_repeat 1 21 0 329 308 8 17 chr10 24335529 24335646 -121253642 - MIR SINE MIR -127 135 20 27 87 0 0 chr10 24337468 24337537 -121251751 + AT_rich Low_complexity Low_complexity 1 69 0 1727 156 0 63 chr10 24337890 24338192 -121251096 - AluJo SINE Alu -21 291 9 388 275 34 143 chr10 24338829 24339243 -121250045 + L2 LINE L2 2921 3289 -24 2099 128 0 13 chr10 24339281 24339641 -121249647 + AluSx SINE Alu 1 312 0 414 261 79 36 chr10 24343518 24343683 -121245605 - MIR SINE MIR -15 247 76 184 200 31 0 chr10 24343975 24344040 -121245248 + CT-rich Low_complexity Low_complexity 2 68 0 197 87 0 65 chr10 24344445 24344491 -121244797 + (T)n Simple_repeat Simple_repeat 1 43 0 301 318 94 60 chr10 24344507 24344774 -121244514 - L2 LINE L2 -21 3292 3017 228 326 14 56 chr10 24346717 24346861 -121242427 - L2 LINE L2 -208 3064 2927 202 288 65 39 chr10 24347151 24347423 -121241865 - L2 LINE L2 -212 3060 2776 863 154 0 15 chr10 24347428 24347564 -121241724 + AluJo SINE Alu 1 134 -178 447 309 134 4 chr10 24347596 24347842 -121241446 - L2 LINE L2 -541 2773 2496 21 57 0 0 chr10 24349134 24349169 -121240119 + AT_rich Low_complexity Low_complexity 1 35 0 433 113 0 0 chr10 24350293 24350364 -121238924 + 5S rRNA rRNA 42 112 -9 23 0 0 0 chr10 24350827 24350850 -121238438 + AT_rich Low_complexity Low_complexity 1 23 0 666 252 102 39 chr10 24351590 24351923 -121237365 + L1ME3A LINE L1 5609 5962 -208 762 144 0 8 chr10 24352278 24352403 -121236885 + FLAM_C SINE Alu 1 124 -19 661 197 167 31 chr10 24352546 24352791 -121236497 - MIR SINE MIR 0 262 3 224 391 76 0 chr10 24352901 24352993 -121236295 - L2 LINE L2 -19 3253 3155 437 356 98 32 chr10 24353278 24353593 -121235695 + L2 LINE L2 2937 3272 0 1034 194 246 6 chr10 24354203 24354544 -121234744 - MLT1D LTR MaLR 0 505 83 353 22 22 0 chr10 24355552 24355598 -121233690 + (TTTC)n Simple_repeat Simple_repeat 2 48 0 1786 151 95 0 chr10 24355601 24355886 -121233402 - AluSx SINE Alu 0 312 1 928 170 23 47 chr10 24356694 24356865 -121232423 + FAM SINE Alu 4 170 -5 1525 147 12 16 chr10 24356892 24357137 -121232151 + AluJo SINE Alu 15 258 -54 2488 50 13 0 chr10 24357947 24358246 -121231042 + AluY SINE Alu 1 303 -8 584 265 59 116 chr10 24358423 24358595 -121230693 - L2 LINE L2 -4 3309 3129 2275 111 3 0 chr10 24358595 24358901 -121230387 + AluSx SINE Alu 1 307 -5 584 265 59 116 chr10 24358901 24359370 -121229918 - L2 LINE L2 -184 3129 2685 211 264 0 57 chr10 24359429 24359482 -121229806 - L3b LINE CR1 -21 1562 1513 2257 65 34 14 chr10 24360438 24360730 -121228558 + AluSc SINE Alu 1 298 -11 2084 142 0 0 chr10 24360842 24361137 -121228151 + AluJb SINE Alu 9 303 -9 24 32 0 0 chr10 24361243 24361274 -121228014 + AT_rich Low_complexity Low_complexity 1 31 0 2118 101 0 24 chr10 24362499 24362809 -121226479 - AluSg SINE Alu 0 303 1 767 153 6 17 chr10 24363140 24363317 -121225971 + CT-rich Low_complexity Low_complexity 3 177 0 758 196 0 6 chr10 24363361 24363529 -121225759 + CT-rich Low_complexity Low_complexity 1 167 0 798 217 0 10 chr10 24363568 24364070 -121225218 + CT-rich Low_complexity Low_complexity 1 496 0 252 279 36 72 chr10 24364125 24364236 -121225052 + L2 LINE L2 3182 3288 -25 736 292 5 0 chr10 24364299 24364484 -121224804 + MIR SINE MIR 71 256 -6 278 312 78 81 chr10 24365451 24365904 -121223384 + L2 LINE L2 2246 2698 -616 2030 133 3 32 chr10 24365904 24366213 -121223075 - AluSx SINE Alu -12 300 1 278 312 78 81 chr10 24366213 24366314 -121222974 + L2 LINE L2 2698 2798 -516 1150 146 34 75 chr10 24366472 24366767 -121222521 - L1MA9 LINE L1 0 6312 6030 341 333 37 30 chr10 24366812 24366947 -121222341 + L2 LINE L2 3127 3262 -10 23 33 0 0 chr10 24366947 24366977 -121222311 + AT_rich Low_complexity Low_complexity 1 30 0 235 309 98 16 chr10 24367210 24367333 -121221955 + MIR SINE MIR 113 245 -17 3260 63 4 35 chr10 24367538 24367998 -121221290 + L1PA13 LINE L1 5716 6161 -2 750 158 72 0 chr10 24368871 24369010 -121220278 - L2 LINE L2 0 3313 3165 21 0 0 0 chr10 24370083 24370104 -121219184 + AT_rich Low_complexity Low_complexity 1 21 0 2081 130 0 3 chr10 24370497 24370808 -121218480 + AluSx SINE Alu 1 310 0 2419 86 0 0 chr10 24371529 24371831 -121217457 - AluY SINE Alu -9 302 1 3018 199 76 17 chr10 24372413 24372545 -121216743 - L1ME1 LINE L1 -50 6116 5993 1643 150 49 59 chr10 24372545 24372852 -121216436 - AluJb SINE Alu 0 312 9 3018 199 76 17 chr10 24372852 24373130 -121216158 - L1ME1 LINE L1 -173 5993 5733 2011 110 7 28 chr10 24373130 24373450 -121215838 - AluSx SINE Alu 0 314 1 3018 199 76 17 chr10 24373450 24373812 -121215476 - L1ME1 LINE L1 -433 5733 5296 * 5518 120 7 23 chr10 24373808 24374836 -121214452 - L1PA16 LINE L1 0 6166 5157 818 250 18 0 chr10 24374829 24375057 -121214231 - L1ME1 LINE L1 -836 5310 5079 * 790 239 17 4 chr10 24375127 24375357 -121213931 - L1ME1 LINE L1 -1066 5080 4848 4820 236 42 40 chr10 24375372 24377409 -121211879 + L1MDb LINE L1 23 2054 -4352 366 23 0 0 chr10 24377409 24377452 -121211836 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 4820 236 42 40 chr10 24377452 24379687 -121209601 + L1MDb LINE L1 2054 4318 -2088 644 198 120 0 chr10 24379685 24379852 -121209436 - L1MD2 LINE L1 -130 6229 6043 * 2170 227 26 41 chr10 24379855 24380587 -121208701 - L1M4 LINE L1 -1216 4930 4210 1265 199 99 95 chr10 24380586 24380874 -121208414 - L1MDb LINE L1 -4820 1260 975 * 1719 171 3 10 chr10 24380874 24381172 -121208116 + AluJo SINE Alu 3 298 -14 1265 199 99 95 chr10 24381172 24381719 -121207569 - L1MDb LINE L1 -5105 975 456 319 289 142 64 chr10 24381752 24381970 -121207318 - L1MDb LINE L1 -5564 506 272 284 288 32 32 chr10 24382353 24382478 -121206810 - L1MDb LINE L1 -5935 135 11 808 193 57 124 chr10 24382480 24382916 -121206372 - LTR37B LTR ERV1 -57 396 6 256 200 0 55 chr10 24383016 24383071 -121206217 - L2 LINE L2 -8 3305 3254 840 249 6 6 chr10 24383226 24383403 -121205885 + MER8 DNA MER2_type 1 177 -62 238 172 121 17 chr10 24383381 24383439 -121205849 + MER2 DNA MER2_type 282 345 0 * 410 165 0 25 chr10 24383439 24383511 -121205777 - Tigger2 DNA MER2_type -2648 70 1 210 264 19 0 chr10 24383606 24383659 -121205629 + GA-rich Low_complexity Low_complexity 2 55 0 700 186 0 8 chr10 24384983 24385101 -121204187 + FLAM_C SINE Alu 1 117 -16 22 35 0 0 chr10 24385102 24385131 -121204157 + AT_rich Low_complexity Low_complexity 1 29 0 35 24 0 0 chr10 24385359 24385401 -121203887 + AT_rich Low_complexity Low_complexity 1 42 0 225 261 0 0 chr10 24386153 24386241 -121203047 + (TA)n Simple_repeat Simple_repeat 1 88 0 246 311 100 54 chr10 24386275 24386800 -121202488 - L2 LINE L2 -4 3268 2612 192 275 53 61 chr10 24386830 24386961 -121202327 - L2 LINE L2 -822 2492 2363 184 254 0 55 chr10 24386978 24387033 -121202255 + L2 LINE L2 3221 3272 0 270 278 124 10 chr10 24387455 24387552 -121201736 - MIR SINE MIR -61 147 40 371 334 43 34 chr10 24387763 24387995 -121201293 + L2 LINE L2 2092 2329 -985 2088 141 7 82 chr10 24387995 24388399 -121200889 - MLT1A2 LTR MaLR 0 374 1 371 334 43 34 chr10 24388399 24388431 -121200857 + L2 LINE L2 2329 2359 -955 209 338 0 0 chr10 24388892 24388960 -121200328 + L2 LINE L2 1371 1438 -1876 377 264 139 21 chr10 24388990 24389134 -121200154 + MIR SINE MIR 18 178 -84 22 0 0 0 chr10 24389183 24389205 -121200083 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr10 24389379 24389400 -121199888 + AT_rich Low_complexity Low_complexity 1 21 0 445 320 64 25 chr10 24389482 24389685 -121199603 - MIR SINE MIR -41 221 11 27 62 0 0 chr10 24391189 24391237 -121198051 + AT_rich Low_complexity Low_complexity 1 48 0 21 95 0 0 chr10 24391472 24391535 -121197753 + AT_rich Low_complexity Low_complexity 1 63 0 501 265 124 50 chr10 24392302 24392844 -121196444 + L1M4 LINE L1 4352 4927 -1219 351 252 78 13 chr10 24393112 24393237 -121196051 - MLT1J1 LTR MaLR -39 370 232 680 152 19 9 chr10 24393819 24393924 -121195364 - AluJb SINE Alu -24 288 183 268 81 0 0 chr10 24393925 24393962 -121195326 + MADE1 DNA Mariner 15 51 -29 2369 101 0 0 chr10 24394099 24394407 -121194881 - AluSx SINE Alu -4 308 1 422 267 37 7 chr10 24394944 24395079 -121194209 + MIR SINE MIR 19 157 -105 * 775 259 103 13 chr10 24395069 24395301 -121193987 - MIR SINE MIR 0 262 10 199 294 0 0 chr10 24395295 24395346 -121193942 + MIR SINE MIR 156 206 -56 * 345 82 0 0 chr10 24395373 24395422 -121193866 + (TG)n Simple_repeat Simple_repeat 2 50 0 637 217 82 9 chr10 24395520 24395700 -121193588 - MER58B DNA MER1_type -19 322 1 2101 185 89 9 chr10 24395958 24396244 -121193044 - LTR40b LTR ERVL 0 462 129 2286 99 10 0 chr10 24396244 24396537 -121192751 + AluSp SINE Alu 1 296 -17 2101 185 89 9 chr10 24396537 24396678 -121192610 - LTR40b LTR ERVL -333 129 1 209 218 51 0 chr10 24396774 24396852 -121192436 + (TA)n Simple_repeat Simple_repeat 1 82 0 572 248 130 39 chr10 24397166 24397363 -121191925 + MIR SINE MIR 11 233 -29 1951 184 82 10 chr10 24397363 24397764 -121191524 - MER95 LTR ERV -1 430 1 572 248 130 39 chr10 24397764 24397796 -121191492 + MIR SINE MIR 233 261 -1 2102 124 3 3 chr10 24398078 24398376 -121190912 - AluSx SINE Alu -13 299 2 2134 130 0 0 chr10 24398617 24398917 -121190371 - AluSx SINE Alu -12 300 1 320 209 204 57 chr10 24400603 24400831 -121188457 - MER34C LTR ERV1 -21 739 385 259 216 20 0 chr10 24400999 24401050 -121188238 - MER34 LTR ERV1 -467 75 24 402 21 0 0 chr10 24401187 24401234 -121188054 + (TA)n Simple_repeat Simple_repeat 2 48 0 1496 183 10 29 chr10 24401241 24401547 -121187741 + AluJo SINE Alu 1 300 -12 2240 113 3 3 chr10 24401582 24401892 -121187396 + AluSq SINE Alu 1 310 -3 587 307 58 0 chr10 24402437 24402626 -121186662 + MIR SINE MIR 52 251 -11 732 223 84 37 chr10 24402860 24403192 -121186096 + LTR35 LTR ERV1 350 618 0 1075 206 30 11 chr10 24403222 24403489 -121185799 + L1MA4 LINE L1 6029 6300 0 4592 143 45 35 chr10 24403615 24403898 -121185390 + LTR39 LTR ERV1 1 280 -503 2051 96 0 53 chr10 24403898 24404226 -121185062 + AluSx SINE Alu 1 312 0 4592 143 45 35 chr10 24404226 24404716 -121184572 + LTR39 LTR ERV1 280 783 0 909 247 58 55 chr10 24404801 24404951 -121184337 + MER39 LTR ERV1 1 149 -393 4137 156 11 0 chr10 24404951 24405579 -121183709 + MER41B LTR ERV1 1 635 0 909 247 58 55 chr10 24405579 24405933 -121183355 + MER39 LTR ERV1 149 539 -3 327 174 101 64 chr10 24407462 24407571 -121181717 - L1ME4a LINE L1 -19 6102 5990 4621 81 0 0 chr10 24407623 24408177 -121181111 - MER41A LTR ERV1 0 554 1 246 32 0 0 chr10 24408867 24408898 -121180390 + (T)n Simple_repeat Simple_repeat 1 31 0 974 210 49 38 chr10 24409439 24409706 -121179582 - MER39 LTR ERV1 0 707 438 1519 121 58 4 chr10 24409708 24409948 -121179340 - LTR45 LTR ERV1 0 525 273 2099 166 44 30 chr10 24409948 24410494 -121178794 - MLT2A2 LTR ERVL 0 554 1 1415 121 86 93 chr10 24410494 24410773 -121178515 - LTR45 LTR ERV1 -248 277 1 260 279 133 62 chr10 24410773 24410985 -121178303 - MER34 LTR ERV1 -268 439 2 22 80 0 0 chr10 24411734 24411784 -121177504 + AT_rich Low_complexity Low_complexity 1 50 0 475 254 52 46 chr10 24412587 24412760 -121176528 - MIR3 SINE MIR -1 207 34 2929 201 16 67 chr10 24412827 24413081 -121176207 + LTR8 LTR ERV1 16 282 -409 2689 139 55 0 chr10 24413081 24413485 -121175803 - MSTB LTR MaLR 0 426 1 2929 201 16 67 chr10 24413485 24413927 -121175361 + LTR8 LTR ERV1 282 676 -15 217 288 80 56 chr10 24414126 24414251 -121175037 + MIR3 SINE MIR 31 158 -50 201 323 63 47 chr10 24414288 24414415 -121174873 - MIR3 SINE MIR -76 132 4 1094 215 81 63 chr10 24414586 24415052 -121174236 - MER39 LTR ERV1 0 707 42 2284 109 3 3 chr10 24415052 24415364 -121173924 + AluSx SINE Alu 1 312 0 257 246 0 0 chr10 24415377 24415434 -121173854 - MER34 LTR ERV1 -485 57 1 1461 168 0 93 chr10 24415486 24415659 -121173629 - AluJo SINE Alu -21 291 160 2225 115 0 31 chr10 24415659 24415981 -121173307 - AluSx SINE Alu 0 312 1 1461 168 0 93 chr10 24415981 24416128 -121173160 - AluJo SINE Alu -152 160 1 225 256 0 0 chr10 24416974 24417017 -121172271 + L2 LINE L2 3255 3297 -16 1860 113 6 77 chr10 24417898 24418209 -121171079 - AluSx SINE Alu -23 289 1 234 231 111 19 chr10 24419336 24419444 -121169844 + L1ME4a LINE L1 5984 6101 -20 2318 99 0 0 chr10 24419498 24419802 -121169486 - AluSg SINE Alu -6 304 1 785 182 56 10 chr10 24419809 24420007 -121169281 + Charlie1 DNA MER1_type 2550 2756 -5 216 274 0 20 chr10 24420028 24420079 -121169209 + MIR SINE MIR 30 79 -129 440 313 171 9 chr10 24420102 24420313 -121168975 + MIR SINE MIR 18 262 0 1864 153 0 19 chr10 24420398 24420705 -121168583 - AluJb SINE Alu -11 301 1 235 247 21 46 chr10 24421082 24421209 -121168079 + CT-rich Low_complexity Low_complexity 1 123 0 1693 159 0 48 chr10 24421808 24422103 -121167185 + AluJo SINE Alu 11 291 -21 809 92 0 0 chr10 24423108 24423206 -121166082 - AluSg/x SINE Alu -21 291 194 976 166 6 0 chr10 24423232 24423389 -121165899 + AluSx SINE Alu 1 158 -154 1318 129 15 5 chr10 24423490 24423716 -121165572 + AluY SINE Alu 80 307 0 1653 179 32 0 chr10 24423776 24424084 -121165204 + MER33 DNA MER1_type 3 320 -4 1744 172 69 0 chr10 24424370 24424661 -121164627 + AluJo SINE Alu 1 311 -1 1410 163 61 30 chr10 24425440 24425704 -121163584 - AluJo SINE Alu -5 307 36 2073 231 4 41 chr10 24426352 24426842 -121162446 + MLT2B1 LTR ERVL 7 478 -42 208 135 0 0 chr10 24427888 24427925 -121161363 + (A)n Simple_repeat Simple_repeat 1 37 0 565 308 97 0 chr10 24428066 24428303 -121160985 + MIR SINE MIR 3 262 0 677 295 48 22 chr10 24428498 24428725 -121160563 + MIR SINE MIR 23 255 -7 26932 36 1 1 chr10 24429761 24433774 -121155514 - L1PA4 LINE L1 0 7574 3555 2036 156 0 0 chr10 24433906 24434214 -121155074 - AluSx SINE Alu -4 308 1 1361 203 13 41 chr10 24434217 24434532 -121154756 - AluJo SINE Alu -2 310 5 1585 208 10 14 chr10 24434898 24435192 -121154096 + AluJo SINE Alu 4 296 -6 1966 135 42 0 chr10 24435403 24435692 -121153596 - AluSx SINE Alu -11 301 1 292 335 85 13 chr10 24436200 24436395 -121152893 + L3b LINE CR1 1033 1243 -340 234 128 0 0 chr10 24436419 24436458 -121152830 + (TATG)n Simple_repeat Simple_repeat 4 42 0 4213 165 23 1 chr10 24436757 24437440 -121151848 + MER44D DNA MER2_type 6 703 -2 779 316 98 67 chr10 24437519 24438412 -121150876 + L2 LINE L2 290 1224 -2090 2236 109 0 10 chr10 24438412 24438714 -121150574 + AluSx SINE Alu 1 299 -13 779 316 98 67 chr10 24438714 24438924 -121150364 + L2 LINE L2 1224 1426 -1888 759 325 59 28 chr10 24439117 24439662 -121149626 + L2 LINE L2 2226 2787 -527 3020 118 41 51 chr10 24439806 24440116 -121149172 - LTR45B LTR ERV1 0 489 184 1830 104 112 0 chr10 24440116 24440376 -121148912 - AluSg SINE Alu -19 291 3 3020 118 41 51 chr10 24440376 24440555 -121148733 - LTR45B LTR ERV1 -305 184 5 381 333 13 31 chr10 24440612 24440771 -121148517 + L2 LINE L2 3117 3272 0 2082 112 14 10 chr10 24440886 24441180 -121148108 + AluSx SINE Alu 1 295 -17 197 33 33 0 chr10 24443269 24443299 -121145989 + (TA)n Simple_repeat Simple_repeat 1 31 0 2169 118 0 0 chr10 24443299 24443586 -121145702 - AluSx SINE Alu -25 287 1 2139 108 105 31 chr10 24443656 24444007 -121145281 + MER51B LTR ERV1 1 377 0 1830 148 25 3 chr10 24444365 24444649 -121144639 + AluJo SINE Alu 5 294 -18 180 0 0 0 chr10 24444733 24444753 -121144535 + (T)n Simple_repeat Simple_repeat 1 20 0 231 133 0 0 chr10 24445333 24445378 -121143910 + (TTCA)n Simple_repeat Simple_repeat 4 48 0 189 0 0 0 chr10 24445777 24445798 -121143490 + (TTCA)n Simple_repeat Simple_repeat 1 21 0 733 264 102 86 chr10 24446270 24446690 -121142598 + LTR16A LTR ERVL 24 450 0 21 0 0 0 chr10 24446755 24446776 -121142512 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 24446958 24446979 -121142309 + AT_rich Low_complexity Low_complexity 1 21 0 452 258 126 26 chr10 24447370 24447641 -121141647 + L1ME4a LINE L1 5711 6008 -113 22 0 0 0 chr10 24447687 24447709 -121141579 + AT_rich Low_complexity Low_complexity 1 22 0 1107 141 0 0 chr10 24447763 24447926 -121141362 - AluSg/x SINE Alu -7 303 141 312 162 0 0 chr10 24447926 24447976 -121141312 - AluSp SINE Alu -129 174 133 2221 95 3 7 chr10 24448255 24448549 -121140739 + AluSg SINE Alu 1 293 -17 25 75 0 0 chr10 24448734 24448787 -121140501 + AT_rich Low_complexity Low_complexity 1 53 0 464 328 33 0 chr10 24449286 24449466 -121139822 + MER5A DNA MER1_type 4 189 0 1584 122 48 71 chr10 24449943 24450238 -121139050 + AluJb SINE Alu 4 291 -21 326 296 80 59 chr10 24450608 24450895 -121138393 + L2 LINE L2 2991 3283 -30 2272 114 0 19 chr10 24450907 24451223 -121138065 - AluSx SINE Alu -2 310 1 297 265 15 0 chr10 24452032 24452100 -121137188 - L2 LINE L2 0 3313 3245 1803 146 36 4 chr10 24452631 24452905 -121136383 + AluSx SINE Alu 4 286 -26 2293 45 69 3 chr10 24453103 24453393 -121135895 - AluY SINE Alu -2 309 1 271 221 73 0 chr10 24453988 24454056 -121135232 - L2 LINE L2 0 3272 3200 2176 111 6 16 chr10 24454218 24454533 -121134755 - AluSx SINE Alu 0 312 1 202 233 100 33 chr10 24455454 24455514 -121133774 + L2 LINE L2 3201 3264 -8 2390 81 10 0 chr10 24455759 24456055 -121133233 + AluY SINE Alu 1 299 -12 270 0 0 0 chr10 24456058 24456088 -121133200 + (TA)n Simple_repeat Simple_repeat 1 30 0 * 369 0 0 0 chr10 24456087 24456128 -121133160 + (GA)n Simple_repeat Simple_repeat 2 42 0 841 176 0 0 chr10 24456208 24456339 -121132949 - FLAM_C SINE Alu -2 131 1 186 103 0 0 chr10 24457124 24457153 -121132135 + (A)n Simple_repeat Simple_repeat 1 29 0 945 121 8 0 chr10 24458269 24458401 -121130887 + AluSq/x SINE Alu 1 133 -179 28 0 0 0 chr10 24458401 24458429 -121130859 + AT_rich Low_complexity Low_complexity 1 28 0 1938 134 3 74 chr10 24458934 24459270 -121130018 + AluSx SINE Alu 1 312 0 230 250 0 18 chr10 24459918 24459974 -121129314 + L2 LINE L2 3251 3305 -8 242 327 37 28 chr10 24460319 24460426 -121128862 + MIR SINE MIR 2 109 -153 365 146 0 0 chr10 24460437 24460492 -121128796 + MER61A LTR ERV1 7 61 -282 1612 182 32 47 chr10 24460502 24460904 -121128384 + MER61-int LTR ERV1 1 396 -4821 2490 70 0 10 chr10 24460904 24461218 -121128070 + AluY SINE Alu 1 311 0 363 162 56 100 chr10 24461285 24461465 -121127823 - MER61-int LTR ERV1 -4517 700 448 2227 92 23 0 chr10 24461469 24461772 -121127516 + AluSx SINE Alu 1 310 -2 406 81 32 0 chr10 24461916 24461978 -121127310 + Alu SINE Alu 240 303 -8 738 210 74 6 chr10 24462571 24462747 -121126541 - MER5A DNA MER1_type 0 189 2 2140 132 0 16 chr10 24462792 24463096 -121126192 - AluJo SINE Alu -13 299 1 2771 10 0 10 chr10 24463266 24463574 -121125714 - AluYb8 SINE Alu -13 305 1 2344 108 0 0 chr10 24463888 24464195 -121125093 + AluSq SINE Alu 1 307 -6 1598 175 7 0 chr10 24464570 24464855 -121124433 + AluJo SINE Alu 12 298 -14 1939 162 0 13 chr10 24465354 24465668 -121123620 + AluJb SINE Alu 3 312 0 2049 123 3 3 chr10 24465810 24466102 -121123186 - AluJo SINE Alu 0 312 21 339 370 50 6 chr10 24466971 24467152 -121122136 + MIR3 SINE MIR 4 192 -16 2228 94 0 0 chr10 24467589 24467876 -121121412 + AluSx SINE Alu 1 287 -25 2988 260 85 63 chr10 24468214 24470020 -121119268 + L1ME2 LINE L1 36 1880 -4516 897 118 0 22 chr10 24470031 24470166 -121119122 + FLAM_C SINE Alu 11 142 -1 704 199 114 57 chr10 24470166 24470261 -121119027 + L1ME2 LINE L1 1868 1956 -4440 1649 181 87 16 chr10 24470261 24470582 -121118706 + MER2 DNA MER2_type 1 344 0 704 199 114 57 chr10 24470582 24470818 -121118470 + L1ME2 LINE L1 1956 2218 -4178 368 309 0 34 chr10 24471328 24471477 -121117811 - L2 LINE L2 -2657 657 514 230 285 77 69 chr10 24471866 24471996 -121117292 + MIR SINE MIR 41 171 -91 23 78 0 0 chr10 24472127 24472178 -121117110 + AT_rich Low_complexity Low_complexity 1 51 0 1717 173 4 4 chr10 24473624 24473902 -121115386 + AluJo SINE Alu 1 278 -34 23 33 0 0 chr10 24474490 24474520 -121114768 + AT_rich Low_complexity Low_complexity 1 30 0 252 0 0 0 chr10 24474604 24474632 -121114656 + (CA)n Simple_repeat Simple_repeat 2 29 0 1565 272 118 57 chr10 24474704 24475338 -121113950 + L1ME2 LINE L1 3732 4326 -1889 2340 151 0 6 chr10 24475338 24475688 -121113600 + MER7A DNA MER2_type 1 346 0 1565 272 118 57 chr10 24475688 24476130 -121113158 + L1ME2 LINE L1 4326 4906 -1309 3741 138 41 35 chr10 24476130 24476791 -121112497 + L1MA7 LINE L1 5619 6283 -8 1565 272 118 57 chr10 24476791 24477032 -121112256 + L1ME2 LINE L1 4906 5131 -1084 1003 318 79 14 chr10 24477230 24477814 -121111474 + L1ME2 LINE L1 5196 5838 -395 2064 134 178 8 chr10 24477814 24478180 -121111108 - MSTA LTR MaLR 0 428 1 1003 318 79 14 chr10 24478180 24478364 -121110924 + L1ME2 LINE L1 5838 6009 -224 2197 135 3 0 chr10 24478683 24478994 -121110294 + AluJb SINE Alu 1 312 0 258 284 86 37 chr10 24479052 24479214 -121110074 - MLT1K LTR MaLR -21 567 398 240 315 79 79 chr10 24479326 24479497 -121109791 - MLT1K LTR MaLR -285 303 130 1232 122 16 126 chr10 24479497 24479743 -121109545 + MER20 DNA MER1_type 1 219 0 240 315 79 79 chr10 24479743 24479838 -121109450 - MLT1K LTR MaLR -457 131 37 543 296 119 44 chr10 24480123 24480670 -121108618 - L1ME4a LINE L1 -214 5907 5320 261 57 0 0 chr10 24480968 24481003 -121108285 + (TG)n Simple_repeat Simple_repeat 1 35 0 2592 184 114 73 chr10 24481020 24481747 -121107541 - LTR48 LTR ERV1 -30 757 1 224 310 64 89 chr10 24482228 24482431 -121106857 - MIR3 SINE MIR -3 205 8 886 316 43 39 chr10 24482845 24483333 -121105955 - MLT1J LTR MaLR -20 491 2 296 323 175 31 chr10 24483667 24483896 -121105392 - MIR SINE MIR 0 262 1 275 281 0 0 chr10 24484000 24484064 -121105224 + MIR SINE MIR 64 127 -81 6173 217 71 20 chr10 24484071 24485284 -121104004 + L1ME1 LINE L1 3648 4798 -1368 2169 94 14 0 chr10 24485284 24485560 -121103728 + AluSx SINE Alu 1 280 -32 225 0 0 0 chr10 24485560 24485585 -121103703 + (CAAT)n Simple_repeat Simple_repeat 4 28 0 6173 217 71 20 chr10 24485585 24485622 -121103666 + L1ME1 LINE L1 4798 4832 -1334 191 0 0 94 chr10 24485622 24485654 -121103634 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 6173 217 71 20 chr10 24485654 24486665 -121102623 + L1ME1 LINE L1 4832 6025 -141 329 204 0 31 chr10 24486720 24486818 -121102470 + G-rich Low_complexity Low_complexity 5 99 0 199 157 39 0 chr10 24486871 24486922 -121102366 + GA-rich Low_complexity Low_complexity 1 53 0 25 31 0 0 chr10 24487140 24487172 -121102116 + GC_rich Low_complexity Low_complexity 1 32 0 192 149 0 0 chr10 24487786 24487833 -121101455 + (TG)n Simple_repeat Simple_repeat 2 48 0 260 230 81 27 chr10 24488233 24488307 -121100981 - L2 LINE L2 -17 3255 3178 347 270 76 38 chr10 24488490 24488675 -121100613 + L1ME LINE L1 5632 5823 -298 1218 204 124 13 chr10 24488760 24489059 -121100229 - MLT1A2 LTR MaLR -7 367 36 286 271 100 59 chr10 24489108 24489278 -121100010 + MIR SINE MIR 86 262 0 1881 178 54 47 chr10 24490275 24490662 -121098626 - MLT1B LTR MaLR 0 390 1 1018 204 0 0 chr10 24491036 24491198 -121098090 + FAM SINE Alu 5 166 -9 2390 108 136 36 chr10 24491879 24492268 -121097020 - MSTA LTR MaLR 0 428 1 252 0 0 0 chr10 24492447 24492475 -121096813 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 4632 73 10 13 chr10 24492476 24493079 -121096209 - L1PB1 LINE L1 -7 6144 5544 817 184 20 14 chr10 24493273 24493566 -121095722 - L1MD3 LINE L1 0 7995 7529 1331 238 269 20 chr10 24493648 24494283 -121095005 - L1MC4 LINE L1 -132 7910 7118 266 267 95 9 chr10 24494763 24494868 -121094420 + MIR3 SINE MIR 86 199 -9 575 291 147 17 chr10 24495946 24496293 -121092995 + L2 LINE L2 2566 2957 -357 239 195 24 85 chr10 24496444 24496526 -121092762 + L2 LINE L2 3235 3311 -2 318 26 0 0 chr10 24496664 24496703 -121092585 + (TG)n Simple_repeat Simple_repeat 2 40 0 832 193 9 57 chr10 24496704 24497022 -121092266 - L1MA4A LINE L1 -29 6274 5911 977 274 82 16 chr10 24497987 24498366 -121090922 + LTR33 LTR ERVL 102 505 -16 266 343 75 49 chr10 24498387 24498839 -121090449 + L2 LINE L2 2412 2875 -439 234 313 68 41 chr10 24499092 24499239 -121090049 + L2 LINE L2 3080 3230 -42 2340 87 13 3 chr10 24499418 24499717 -121089571 - AluSq SINE Alu -11 302 1 2337 103 0 0 chr10 24499935 24500235 -121089053 - AluSx SINE Alu -12 300 1 2157 111 31 0 chr10 24500727 24501016 -121088272 + AluSx SINE Alu 1 298 -14 721 217 70 0 chr10 24503118 24503275 -121086013 + MER3 DNA MER1_type 2 122 -87 335 100 0 73 chr10 24503275 24503385 -121085903 + (TTTAA)n Simple_repeat Simple_repeat 3 104 0 381 177 0 25 chr10 24503392 24503471 -121085817 + MER3 DNA MER1_type 131 207 -2 837 165 71 39 chr10 24503816 24503998 -121085290 + MIR SINE MIR 41 228 -34 2287 80 20 3 chr10 24504041 24504341 -121084947 - AluSx SINE Alu -5 307 3 1653 191 154 12 chr10 24505018 24505426 -121083862 + MLT1C LTR MaLR 1 466 -1 2179 139 0 0 chr10 24505527 24505828 -121083460 + AluSx SINE Alu 1 301 -11 581 223 129 20 chr10 24505872 24506074 -121083214 - MIR SINE MIR -9 253 30 500 328 80 10 chr10 24506118 24506319 -121082969 - MIR SINE MIR -33 229 15 21 0 0 0 chr10 24507309 24507330 -121081958 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr10 24507554 24507583 -121081705 + AT_rich Low_complexity Low_complexity 1 29 0 327 273 197 25 chr10 24507597 24507661 -121081627 - MIR SINE MIR -27 235 183 6417 130 16 7 chr10 24507661 24508575 -121080713 - MER49 LTR ERV1 0 923 1 327 273 197 25 chr10 24508575 24508708 -121080580 - MIR SINE MIR -79 183 4 1423 199 40 59 chr10 24508770 24509017 -121080271 + Charlie1 DNA MER1_type 2349 2586 -175 1159 137 106 70 chr10 24509017 24509075 -121080213 + MER46A DNA MER2_type 1 55 -2676 1758 137 74 0 chr10 24509075 24509345 -121079943 - AluSx SINE Alu -17 295 6 1159 137 106 70 chr10 24509345 24509513 -121079775 + MER46A DNA MER2_type 55 235 -1 1423 199 40 59 chr10 24509513 24509686 -121079602 + Charlie1 DNA MER1_type 2586 2761 0 201 39 0 0 chr10 24509790 24509816 -121079472 + (T)n Simple_repeat Simple_repeat 1 26 0 511 241 148 42 chr10 24510090 24510306 -121078982 - MIR SINE MIR -1 261 23 1944 119 40 0 chr10 24511038 24511354 -121077934 - AluSx SINE Alu 0 312 1 447 219 93 20 chr10 24511860 24512011 -121077277 - MIR SINE MIR -9 253 92 330 111 0 83 chr10 24512491 24512563 -121076725 - MSTA LTR MaLR 0 426 361 2328 147 55 0 chr10 24512595 24512975 -121076313 - MSTA LTR MaLR -27 401 1 2422 93 3 0 chr10 24513525 24513836 -121075452 + AluSp SINE Alu 1 312 -1 224 200 30 44 chr10 24514260 24514395 -121074893 + (TATAA)n Simple_repeat Simple_repeat 2 134 0 480 254 14 60 chr10 24514420 24514526 -121074762 - L1M1 LINE L1 -4576 3170 3061 2272 109 0 6 chr10 24514526 24514838 -121074450 - AluSg SINE Alu 0 310 1 480 254 14 60 chr10 24514838 24514991 -121074297 - L1M1 LINE L1 -4685 3061 2851 * 4859 220 50 66 chr10 24514981 24516543 -121072745 - L1M4 LINE L1 -1197 4949 3413 2533 55 0 7 chr10 24516543 24516851 -121072437 + AluY SINE Alu 1 306 -5 4859 220 50 66 chr10 24516851 24516977 -121072311 - L1M4 LINE L1 -2733 3413 3287 475 254 52 46 chr10 24517690 24517863 -121071425 - MIR3 SINE MIR -1 207 34 2929 201 16 67 chr10 24517930 24518184 -121071104 + LTR8 LTR ERV1 16 282 -409 2689 139 55 0 chr10 24518184 24518588 -121070700 - MSTB LTR MaLR 0 426 1 2929 201 16 67 chr10 24518588 24519030 -121070258 + LTR8 LTR ERV1 282 676 -15 217 288 80 56 chr10 24519229 24519354 -121069934 + MIR3 SINE MIR 31 158 -50 201 323 63 47 chr10 24519391 24519518 -121069770 - MIR3 SINE MIR -76 132 4 1094 215 81 63 chr10 24519689 24520155 -121069133 - MER39 LTR ERV1 0 707 42 2220 104 3 3 chr10 24520155 24520453 -121068835 + AluSx SINE Alu 1 298 -14 224 200 30 44 chr10 24520890 24521025 -121068263 + (TATAA)n Simple_repeat Simple_repeat 2 134 0 480 254 14 60 chr10 24521050 24521156 -121068132 - L1M1 LINE L1 -4576 3170 3061 2261 112 0 6 chr10 24521156 24521468 -121067820 - AluSg SINE Alu 0 310 1 480 254 14 60 chr10 24521468 24521621 -121067667 - L1M1 LINE L1 -4685 3061 2851 * 7174 224 52 95 chr10 24521611 24523173 -121066115 - L1MCa LINE L1 -1197 5229 3602 2517 58 0 7 chr10 24523173 24523481 -121065807 + AluY SINE Alu 1 306 -5 7174 224 52 95 chr10 24523481 24523714 -121065574 - L1MCa LINE L1 -2824 3602 3361 943 53 0 0 chr10 24523714 24523827 -121065461 - AluY SINE Alu -6 305 193 7174 224 52 95 chr10 24523827 24525112 -121064176 - L1MCa LINE L1 -3065 3361 2023 284 0 28 0 chr10 24525112 24525148 -121064140 + (CA)n Simple_repeat Simple_repeat 2 38 0 7174 224 52 95 chr10 24525148 24525531 -121063757 - L1MCa LINE L1 -4403 2023 1639 1794 175 0 7 chr10 24525531 24525823 -121063465 - AluJo SINE Alu -22 290 1 7174 224 52 95 chr10 24525823 24526004 -121063284 - L1MCa LINE L1 -4787 1639 1452 755 185 9 37 chr10 24526004 24526193 -121063095 - MLT1A1 LTR MaLR 0 443 209 664 274 44 68 chr10 24526193 24526533 -121062755 - L1MCa LINE L1 -5689 727 396 446 311 64 17 chr10 24526649 24526884 -121062404 + HERV16 LTR ERVL 2060 2305 -2691 743 167 40 16 chr10 24527036 24527162 -121062126 + FLAM_A SINE Alu 1 129 -4 1646 170 7 14 chr10 24528402 24528684 -121060604 - AluJb SINE Alu -19 293 14 5054 118 8 5 chr10 24528874 24529609 -121059679 + L1PA13 LINE L1 5427 6163 0 801 123 0 72 chr10 24529646 24529784 -121059504 - FLAM_A SINE Alu 0 142 15 1638 158 25 11 chr10 24530221 24530505 -121058783 + AluJo SINE Alu 11 298 -14 1788 249 18 20 chr10 24530620 24531058 -121058230 + L1MC5 LINE L1 5389 5825 -1983 2424 218 142 88 chr10 24531078 24531783 -121057505 + L1MC5 LINE L1 6082 6747 -1214 1212 178 66 56 chr10 24531783 24532070 -121057218 + AluJo SINE Alu 1 290 -22 2424 218 142 88 chr10 24532070 24532291 -121056997 + L1MC5 LINE L1 6747 6955 -1006 1529 189 0 34 chr10 24532291 24532582 -121056706 + AluJb SINE Alu 1 281 -31 819 56 32 8 chr10 24532585 24532710 -121056578 + (GAAA)n Simple_repeat Simple_repeat 2 129 0 2424 218 142 88 chr10 24532710 24533464 -121055824 + L1MC5 LINE L1 6956 7881 -80 358 319 113 61 chr10 24533470 24533699 -121055589 + L1MEc LINE L1 175 415 -5981 2338 90 3 10 chr10 24533928 24534240 -121055048 + AluY SINE Alu 1 310 -1 597 247 23 6 chr10 24534512 24534686 -121054602 + MER104 DNA Tc2 4 180 0 279 331 78 21 chr10 24534724 24534866 -121054422 - L2 LINE L2 -467 2847 2698 410 119 0 0 chr10 24534872 24534931 -121054357 + MSTB1 LTR MaLR 1 59 -373 818 159 28 88 chr10 24536460 24536745 -121052543 + MER31-int LTR ERV1 1270 1686 -3250 247 260 240 0 chr10 24537610 24537710 -121051578 + L2 LINE L2 3174 3297 -16 219 225 0 0 chr10 24537676 24537716 -121051572 + MIR SINE MIR 219 258 -4 * 2061 179 35 5 chr10 24537881 24538256 -121051032 + MSTB LTR MaLR 41 426 0 1166 322 45 27 chr10 24538275 24539011 -121050277 - L2 LINE L2 -650 2664 1916 382 250 88 36 chr10 24539083 24539275 -121050013 + L1P5 LINE L1 5270 5471 -683 * 5417 163 22 3 chr10 24539256 24540942 -121048346 + L1PA16 LINE L1 4379 6099 -67 462 302 116 35 chr10 24541043 24541536 -121047752 + L1ME4a LINE L1 5578 6110 -11 1753 159 17 0 chr10 24542432 24542734 -121046554 - AluJb SINE Alu -5 307 1 577 281 101 60 chr10 24542906 24543088 -121046200 - MIR SINE MIR -12 250 56 1693 163 13 10 chr10 24543088 24543389 -121045899 - AluJo SINE Alu -10 302 1 577 281 101 60 chr10 24543389 24543423 -121045865 - MIR SINE MIR -206 56 25 1267 84 0 0 chr10 24543460 24543626 -121045662 - AluSg/x SINE Alu -22 290 125 345 186 53 0 chr10 24543626 24543739 -121045549 + (TA)n Simple_repeat Simple_repeat 2 120 0 876 147 0 0 chr10 24543740 24543883 -121045405 - FLAM_C SINE Alu 0 143 1 180 0 0 0 chr10 24544747 24544767 -121044521 + (CA)n Simple_repeat Simple_repeat 2 21 0 392 355 113 0 chr10 24544809 24544995 -121044293 + L2 LINE L2 2871 3077 -195 359 317 31 25 chr10 24545253 24545414 -121043874 + L2 LINE L2 3111 3272 0 771 201 0 0 chr10 24546407 24546581 -121042707 + (TG)n Simple_repeat Simple_repeat 1 174 0 1942 136 0 3 chr10 24546669 24546970 -121042318 - AluSx SINE Alu -12 300 1 466 290 78 61 chr10 24546972 24547327 -121041961 - L1ME3A LINE L1 -281 5889 5523 2194 101 0 0 chr10 24547327 24547623 -121041665 + AluSc SINE Alu 1 296 -13 466 290 78 61 chr10 24547623 24547739 -121041549 - L1ME3A LINE L1 -647 5523 5410 2169 104 0 25 chr10 24547833 24548150 -121041138 - AluSx SINE Alu -3 309 1 220 356 0 39 chr10 24548258 24548362 -121040926 + MIR SINE MIR 6 105 -157 727 264 43 39 chr10 24548407 24548638 -121040650 + MIR SINE MIR 5 236 -26 280 274 34 12 chr10 24548709 24548818 -121040470 - MIR SINE MIR -49 159 47 2046 136 0 10 chr10 24549869 24550179 -121039109 + AluSx SINE Alu 1 307 -5 251 133 79 0 chr10 24550228 24550393 -121038895 + (ATATG)n Simple_repeat Simple_repeat 3 180 0 293 152 48 8 chr10 24550401 24550526 -121038762 + (TATAA)n Simple_repeat Simple_repeat 5 134 0 298 113 49 28 chr10 24550648 24550790 -121038498 + (TA)n Simple_repeat Simple_repeat 2 146 0 10108 24 0 6 chr10 24550797 24552741 -121036547 + L1PA3 LINE L1 4214 6153 -2 376 34 68 62 chr10 24552755 24552932 -121036356 + (TA)n Simple_repeat Simple_repeat 1 178 0 1794 160 0 10 chr10 24553515 24553822 -121035466 + AluJo SINE Alu 1 304 -8 2043 257 36 15 chr10 24553897 24554423 -121034865 + MLT1H1 LTR MaLR 19 555 0 437 290 26 19 chr10 24554431 24554586 -121034702 + L1MB8 LINE L1 5590 5745 -425 669 185 23 7 chr10 24554874 24555145 -121034143 + GA-rich Low_complexity Low_complexity 1 275 0 310 298 24 0 chr10 24555158 24555242 -121034046 + GA-rich Low_complexity Low_complexity 3 88 0 246 287 85 54 chr10 24555379 24555508 -121033780 + L2 LINE L2 3180 3312 -1 2155 51 0 98 chr10 24557164 24557526 -121031762 - AluY SINE Alu 0 311 1 1993 90 53 30 chr10 24557744 24558043 -121031245 + AluSg SINE Alu 1 306 -4 241 341 63 0 chr10 24558170 24558296 -121030992 + L2 LINE L2 3137 3270 -2 585 289 26 56 chr10 24558325 24558591 -121030697 - MIR SINE MIR 0 262 5 185 357 122 0 chr10 24558609 24558707 -121030581 + L3 LINE CR1 502 611 -966 544 221 161 93 chr10 24558722 24559089 -121030199 - MLT1J2 LTR MaLR 0 450 59 1793 186 13 23 chr10 24559091 24559478 -121029810 + L1MB8 LINE L1 5795 6177 -1 259 311 81 43 chr10 24559488 24559649 -121029639 + L3 LINE CR1 770 936 -641 2141 115 0 0 chr10 24559887 24560182 -121029106 - AluSx SINE Alu -13 299 5 1322 148 4 37 chr10 24561016 24561260 -121028028 + AluJo SINE Alu 75 310 -2 303 140 0 0 chr10 24561268 24561318 -121027970 + (GGGA)n Simple_repeat Simple_repeat 3 52 0 2057 117 3 3 chr10 24561940 24562238 -121027050 + AluSx SINE Alu 1 298 -14 213 255 151 47 chr10 24562359 24562465 -121026823 + MIR SINE MIR 124 240 -22 1285 204 55 67 chr10 24562914 24563335 -121025953 + MLT1D LTR MaLR 1 416 -89 756 152 7 29 chr10 24563341 24563357 -121025931 - AluJb SINE Alu -176 136 121 189 74 0 0 chr10 24563357 24563384 -121025904 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 756 152 7 29 chr10 24563384 24563505 -121025783 - AluJb SINE Alu -191 121 2 1871 145 7 0 chr10 24563558 24563848 -121025440 + AluSx SINE Alu 14 305 -7 319 171 143 0 chr10 24563849 24563919 -121025369 + MLT1D LTR MaLR 426 505 0 625 150 0 47 chr10 24564157 24564284 -121025004 + FLAM_A SINE Alu 22 142 0 1064 232 90 12 chr10 24565241 24565564 -121023724 + L1ME3A LINE L1 5602 5949 -221 227 263 166 51 chr10 24565628 24565803 -121023485 + L1ME3A LINE L1 5962 6156 -14 415 295 96 26 chr10 24565877 24566378 -121022910 - L1ME4a LINE L1 0 6121 5586 319 320 41 8 chr10 24566685 24566807 -121022481 + MIR SINE MIR 117 242 -20 1203 286 35 33 chr10 24567159 24567585 -121021703 - MLT1J2 LTR MaLR 0 450 24 246 273 0 0 chr10 24567634 24567689 -121021599 + (TA)n Simple_repeat Simple_repeat 2 56 0 305 265 72 12 chr10 24567690 24567773 -121021515 - L1MC4 LINE L1 -1340 6702 6615 1696 164 29 0 chr10 24568596 24568876 -121020412 + AluJb SINE Alu 4 291 -21 413 233 25 36 chr10 24570154 24570291 -121018997 - MIR SINE MIR -63 145 43 23 0 0 0 chr10 24572726 24572749 -121016539 + GC_rich Low_complexity Low_complexity 1 23 0 501 352 86 12 chr10 24574396 24574723 -121014565 + L2 LINE L2 2422 2772 -542 24 0 0 0 chr10 24574998 24575022 -121014266 + AT_rich Low_complexity Low_complexity 1 24 0 249 276 0 0 chr10 24575186 24575244 -121014044 + L2 LINE L2 3214 3271 -1 1378 285 29 27 chr10 24575457 24575902 -121013386 - MLT1J LTR MaLR -65 446 1 922 256 75 47 chr10 24576113 24576473 -121012815 - MLT1I LTR MaLR -1 408 39 241 176 59 82 chr10 24577550 24577635 -121011653 - AluSc SINE Alu 0 299 217 1707 141 19 0 chr10 24577761 24578030 -121011258 - AluSg SINE Alu -36 274 1 214 347 61 20 chr10 24578159 24578257 -121011031 + L2 LINE L2 3170 3271 -1 1517 153 117 0 chr10 24578360 24578634 -121010654 + AluJb SINE Alu 1 306 -6 230 206 48 0 chr10 24578683 24578746 -121010542 + Charlie7 DNA MER1_type 44 109 -2503 * 372 173 45 60 chr10 24578724 24578857 -121010431 + Charlie7 DNA MER1_type 2437 2567 -45 879 282 66 63 chr10 24578915 24578958 -121010330 + MLT1J LTR MaLR 36 77 -434 4428 29 0 2 chr10 24578958 24579464 -121009824 + L1PA5 LINE L1 5636 6142 -12 198 0 0 0 chr10 24579464 24579486 -121009802 + (TA)n Simple_repeat Simple_repeat 1 22 0 879 282 66 63 chr10 24579492 24579859 -121009429 + MLT1J LTR MaLR 77 447 -64 321 327 128 49 chr10 24580127 24580353 -121008935 - MIR SINE MIR -6 256 13 244 315 0 0 chr10 24580538 24580611 -121008677 + (TA)n Simple_repeat Simple_repeat 1 73 0 248 188 25 25 chr10 24580774 24580854 -121008434 + (TTAA)n Simple_repeat Simple_repeat 2 81 0 1753 174 26 0 chr10 24581876 24582180 -121007108 - AluJb SINE Alu 0 312 1 573 232 33 20 chr10 24582482 24582633 -121006655 - MIR SINE MIR -2 260 108 1265 145 5 10 chr10 24583683 24583890 -121005398 + L1PB3 LINE L1 5946 6151 -3 1071 133 0 16 chr10 24584130 24584318 -121004970 + L1MA4 LINE L1 6115 6299 -1 26 0 0 0 chr10 24584319 24584345 -121004943 + AT_rich Low_complexity Low_complexity 1 26 0 1283 146 163 12 chr10 24584476 24584743 -121004545 - AluSx SINE Alu 0 304 1 521 210 116 55 chr10 24584794 24584975 -121004313 - L1MC4a LINE L1 -1874 5934 5743 1006 151 0 0 chr10 24585609 24585775 -121003513 + FRAM SINE Alu 4 169 -7 587 163 0 0 chr10 24585896 24585988 -121003300 + AluJ/FLAM SINE Alu 6 97 -215 677 176 0 0 chr10 24586114 24586222 -121003066 + FLAM_C SINE Alu 11 118 -25 296 193 0 0 chr10 24586251 24586308 -121002980 + MIR SINE MIR 68 124 -84 189 107 0 0 chr10 24586920 24586948 -121002340 + (GA)n Simple_repeat Simple_repeat 2 29 0 823 192 0 0 chr10 24586974 24587125 -121002163 + FRAM SINE Alu 5 155 -21 378 42 0 0 chr10 24587460 24587508 -121001780 + (TC)n Simple_repeat Simple_repeat 2 49 0 288 0 0 0 chr10 24587792 24587824 -121001464 + (TG)n Simple_repeat Simple_repeat 1 32 0 2018 106 0 0 chr10 24588218 24588493 -121000795 + AluSx SINE Alu 1 275 -37 360 0 0 0 chr10 24588868 24588908 -121000380 + (CA)n Simple_repeat Simple_repeat 2 41 0 23 78 0 0 chr10 24590477 24590528 -120998760 + GC_rich Low_complexity Low_complexity 1 51 0 23 33 0 0 chr10 24590694 24590724 -120998564 + GC_rich Low_complexity Low_complexity 1 30 0 23 0 0 0 chr10 24591048 24591071 -120998217 + GC_rich Low_complexity Low_complexity 1 23 0 246 195 32 41 chr10 24591237 24591360 -120997928 + (CGG)n Simple_repeat Simple_repeat 1 122 0 228 220 0 0 chr10 24591513 24591572 -120997716 + G-rich Low_complexity Low_complexity 5 63 0 23 0 0 0 chr10 24591768 24591791 -120997497 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr10 24592485 24592509 -120996779 + AT_rich Low_complexity Low_complexity 1 24 0 327 257 0 67 chr10 24592886 24592991 -120996297 - MIR SINE MIR -80 182 85 212 143 0 0 chr10 24595937 24595972 -120993316 + (CCCCCT)n Simple_repeat Simple_repeat 6 40 0 201 213 0 0 chr10 24604833 24604880 -120984408 + (TA)n Simple_repeat Simple_repeat 2 48 0 26 50 0 0 chr10 24605280 24605320 -120983968 + AT_rich Low_complexity Low_complexity 1 40 0 193 214 129 29 chr10 24607004 24607074 -120982214 + L2 LINE L2 3196 3272 0 455 253 65 65 chr10 24607150 24607336 -120981952 + MLT1H LTR MaLR 106 291 -258 183 318 53 58 chr10 24607598 24607787 -120981501 - L2 LINE L2 -1104 2210 2023 839 190 69 75 chr10 24607787 24608111 -120981177 + L1MA9 LINE L1 5990 6305 -7 2056 151 0 0 chr10 24608130 24608435 -120980853 + AluJb SINE Alu 1 305 -7 2002 156 0 10 chr10 24608834 24609135 -120980153 - AluSx SINE Alu -14 298 1 1722 191 66 66 chr10 24609436 24609869 -120979419 - MLT1C LTR MaLR 0 467 32 207 0 0 0 chr10 24609869 24609892 -120979396 + (TG)n Simple_repeat Simple_repeat 1 23 0 1722 191 66 66 chr10 24609892 24609925 -120979363 - MLT1C LTR MaLR -434 33 1 2106 186 103 5 chr10 24610355 24610780 -120978508 + MLT1C LTR MaLR 1 467 0 414 0 0 0 chr10 24611191 24611237 -120978051 + (GA)n Simple_repeat Simple_repeat 1 46 0 464 241 200 38 chr10 24611486 24611776 -120977512 + L1ME3A LINE L1 895 1231 -4888 303 245 64 21 chr10 24611821 24612012 -120977276 + L1ME3A LINE L1 1266 1619 -871 242 318 112 17 chr10 24612254 24612657 -120976631 + L1ME3A LINE L1 2105 2545 -3584 383 281 161 35 chr10 24612786 24613152 -120976136 + L1ME3A LINE L1 2847 3166 -2963 2102 132 0 3 chr10 24613152 24613448 -120975840 + AluSx SINE Alu 1 295 -17 383 281 161 35 chr10 24613448 24613672 -120975616 + L1ME3A LINE L1 3166 3511 -2618 2075 96 0 0 chr10 24614329 24614589 -120974699 - AluSg SINE Alu -16 294 35 601 281 143 25 chr10 24614617 24615148 -120974140 + L1ME3A LINE L1 3553 4146 -1983 902 273 121 35 chr10 24615178 24615735 -120973553 + L1ME3A LINE L1 5241 5851 -294 1556 172 20 26 chr10 24617176 24617478 -120971810 - AluJb SINE Alu -12 300 1 21 36 0 0 chr10 24618785 24618813 -120970475 + AT_rich Low_complexity Low_complexity 1 28 0 1652 197 0 17 chr10 24618915 24619215 -120970073 + AluJo SINE Alu 1 295 -17 295 239 51 77 chr10 24619361 24619478 -120969810 - MIR SINE MIR -48 214 101 628 264 63 10 chr10 24619611 24619817 -120969471 + MIR SINE MIR 6 218 -44 1776 135 212 33 chr10 24620076 24620439 -120968849 - MSTA LTR MaLR 0 428 1 444 182 0 0 chr10 24620610 24620676 -120968612 - U4 snRNA snRNA -79 66 1 1523 179 59 0 chr10 24621418 24621691 -120967597 + L1PA16 LINE L1 5873 6161 -5 479 171 0 146 chr10 24621768 24621891 -120967397 + AluJb SINE Alu 86 190 -122 497 121 205 0 chr10 24621891 24621974 -120967314 - AluJ/FLAM SINE Alu -210 102 3 1624 157 33 47 chr10 24622107 24622407 -120966881 - AluJb SINE Alu -15 297 2 13689 65 6 0 chr10 24623159 24624907 -120964381 + L1PA5 LINE L1 741 2498 -3648 385 22 0 0 chr10 24625031 24625076 -120964212 + L1PA5 LINE L1 2521 2565 -3581 24456 44 7 0 chr10 24625076 24628724 -120960564 + L1PA5 LINE L1 2497 6154 0 407 210 30 0 chr10 24628730 24628830 -120960458 + L1ME3A LINE L1 2395 2497 -3649 1111 285 88 39 chr10 24628867 24629076 -120960212 + L1ME3A LINE L1 4386 4583 -1581 236 77 26 0 chr10 24629076 24629115 -120960173 + (TTTTG)n Simple_repeat Simple_repeat 5 44 0 1111 285 88 39 chr10 24629115 24630047 -120959241 + L1ME3A LINE L1 4583 5585 -579 1173 164 84 19 chr10 24630104 24630318 -120958970 - AluJb SINE Alu -22 290 63 457 299 86 73 chr10 24630318 24630703 -120958585 + MLT1J LTR MaLR 78 467 -44 701 286 46 46 chr10 24630739 24631089 -120958199 + L1ME3A LINE L1 5600 5949 -221 1914 177 0 0 chr10 24632007 24632301 -120956987 + AluJo SINE Alu 5 298 -14 277 217 0 0 chr10 24633167 24633235 -120956053 + L1PA13 LINE L1 5508 5575 -576 3603 93 2 14 chr10 24633367 24633853 -120955435 + L1PA13 LINE L1 5676 6155 -8 2268 103 10 10 chr10 24633897 24634209 -120955079 + AluSq SINE Alu 1 312 -1 645 217 28 7 chr10 24634221 24634364 -120954924 + L1ME2 LINE L1 4713 4858 -1288 267 284 68 11 chr10 24634386 24634474 -120954814 - MLT1G1 LTR MaLR -502 93 1 2407 187 66 81 chr10 24634474 24634668 -120954620 + L1ME2 LINE L1 5125 5320 -844 800 170 28 44 chr10 24634668 24634850 -120954438 + L1MB2 LINE L1 5991 6169 -2 2407 187 66 81 chr10 24634850 24635003 -120954285 + L1ME2 LINE L1 5320 5474 -690 2017 91 11 11 chr10 24635003 24635131 -120954157 + AluSg SINE Alu 5 132 -187 2613 47 0 19 chr10 24635131 24635448 -120953840 + AluY SINE Alu 1 311 0 2017 91 11 11 chr10 24635448 24635634 -120953654 + AluSg SINE Alu 131 319 0 2407 187 66 81 chr10 24635634 24635760 -120953528 + L1ME2 LINE L1 5474 5600 -564 2273 111 3 0 chr10 24635760 24636058 -120953230 + AluSx SINE Alu 1 299 -13 3640 82 21 4 chr10 24636059 24636532 -120952756 - L1PA15 LINE L1 -13 6152 5672 2407 187 66 81 chr10 24636532 24636929 -120952359 + L1ME2 LINE L1 5599 5981 -183 460 247 110 13 chr10 24637124 24637278 -120952010 + L1ME2 LINE L1 5987 6155 -9 357 331 22 29 chr10 24637429 24637565 -120951723 + L2 LINE L2 3136 3270 -2 281 305 110 61 chr10 24638786 24638950 -120950338 + L2 LINE L2 3058 3229 -43 30 45 0 0 chr10 24639246 24639290 -120949998 + AT_rich Low_complexity Low_complexity 1 44 0 1294 148 0 28 chr10 24639331 24639547 -120949741 + AluJb SINE Alu 88 297 -15 779 298 99 3 chr10 24639577 24639859 -120949429 + L1MC4a LINE L1 6612 6920 -888 274 157 9 222 chr10 24639900 24640008 -120949280 + MLT1D-int LTR MaLR 568 652 -719 2195 210 39 124 chr10 24640063 24640843 -120948445 + MLT1D-int LTR MaLR 659 1371 0 986 210 19 19 chr10 24640843 24641057 -120948231 + MLT1D LTR MaLR 1 214 -291 902 289 132 32 chr10 24641057 24641305 -120947983 + L1MEc LINE L1 1276 1498 -4717 2213 112 3 7 chr10 24641305 24641610 -120947678 - AluSg SINE Alu -6 304 1 902 289 132 32 chr10 24641610 24642732 -120946556 + L1MEc LINE L1 1498 2749 -3466 1038 110 18 25 chr10 24642743 24642906 -120946382 + AluSp SINE Alu 1 162 -151 1452 72 5 10 chr10 24643019 24643212 -120946076 + AluSp SINE Alu 109 300 -13 1052 206 67 58 chr10 24643214 24643405 -120945883 + L1MEc LINE L1 2753 2941 -3274 1868 171 3 0 chr10 24643405 24643697 -120945591 - AluJb SINE Alu -19 293 1 1052 206 67 58 chr10 24643697 24643971 -120945317 + L1MEc LINE L1 2941 3222 -2993 5144 166 20 9 chr10 24643972 24645879 -120943409 + L1PA15 LINE L1 4247 6165 0 433 207 62 78 chr10 24645891 24646084 -120943204 + L1MEc LINE L1 3206 3395 -2820 704 140 9 0 chr10 24646086 24646193 -120943095 + Tigger3(Golem) DNA MER2_type 1 108 -2921 746 111 21 21 chr10 24646193 24646337 -120942951 + Tigger3(Golem) DNA MER2_type 2284 2427 -602 949 132 7 14 chr10 24646346 24646490 -120942798 - AluJb SINE Alu -27 285 143 3740 112 33 10 chr10 24646491 24647090 -120942198 + Tigger3(Golem) DNA MER2_type 2416 3028 -1 342 229 62 56 chr10 24647102 24647281 -120942007 + L1MEc LINE L1 3406 3585 -2630 1527 90 0 24 chr10 24648454 24648666 -120940622 + AluSq SINE Alu 105 311 -2 1936 163 3 0 chr10 24650322 24650610 -120938678 + AluJo SINE Alu 1 289 -23 229 321 69 23 chr10 24651549 24651767 -120937521 - L1MEd LINE L1 -4945 1174 947 24 53 0 0 chr10 24651877 24651915 -120937373 + AT_rich Low_complexity Low_complexity 1 38 0 337 305 11 21 chr10 24651969 24652064 -120937224 - L2 LINE L2 -1 3312 3219 281 357 54 67 chr10 24652120 24652230 -120937058 - L2 LINE L2 -838 2476 2366 212 0 36 0 chr10 24652230 24652258 -120937030 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 281 357 54 67 chr10 24652258 24652337 -120936951 - L2 LINE L2 -948 2366 2288 2255 104 51 25 chr10 24652337 24652692 -120936596 + THE1B LTR MaLR 1 364 0 281 357 54 67 chr10 24652692 24652815 -120936473 - L2 LINE L2 -1026 2288 2167 2234 102 0 7 chr10 24653718 24654011 -120935277 - AluSq SINE Alu -22 291 1 27 0 0 0 chr10 24654014 24654041 -120935247 + AT_rich Low_complexity Low_complexity 1 27 0 1689 188 10 7 chr10 24655561 24655853 -120933435 - AluJo SINE Alu -19 293 1 1036 268 68 37 chr10 24655879 24656424 -120932864 + L1MCa LINE L1 65 582 -5841 1023 290 103 69 chr10 24656436 24657071 -120932217 + L1MCa LINE L1 464 1129 -5294 1685 196 0 4 chr10 24657071 24657352 -120931936 + AluJb SINE Alu 2 281 -31 1023 290 103 69 chr10 24657352 24657441 -120931847 + L1MCa LINE L1 1129 1213 -5210 201 262 0 0 chr10 24657473 24657515 -120931773 + (TATG)n Simple_repeat Simple_repeat 2 43 0 295 206 41 0 chr10 24657535 24657608 -120931680 + L1MCa LINE L1 1251 1326 -5097 1029 189 37 0 chr10 24758452 24758643 -120830645 - MER45B DNA AcHobo -1 1039 842 526 178 0 11 chr10 24758655 24758745 -120830543 - FLAM_C SINE Alu -26 117 29 1519 207 0 17 chr10 24758893 24759192 -120830096 - AluSx SINE Alu -18 294 1 976 219 0 0 chr10 24759534 24759717 -120829571 + AluJo SINE Alu 118 300 -12 3088 152 77 54 chr10 24759720 24760275 -120829013 + L1MB7 LINE L1 5480 6021 -163 1820 172 3 0 chr10 24760275 24760572 -120828716 + AluJb SINE Alu 14 311 -1 3088 152 77 54 chr10 24760572 24760585 -120828703 + L1MB7 LINE L1 6021 6032 -152 1435 184 43 29 chr10 24760585 24760706 -120828582 + AluJo SINE Alu 1 119 -192 225 0 0 0 chr10 24760706 24760731 -120828557 + (TAA)n Simple_repeat Simple_repeat 1 25 0 1435 184 43 29 chr10 24760731 24760916 -120828372 + AluJo SINE Alu 119 311 0 3088 152 77 54 chr10 24760916 24761007 -120828281 + L1MB7 LINE L1 6032 6158 -26 207 0 0 0 chr10 24761111 24761134 -120828154 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 230 236 73 0 chr10 24761614 24761669 -120827619 - L2 LINE L2 -4 3268 3210 1963 136 0 17 chr10 24761831 24762133 -120827155 - AluSx SINE Alu -15 297 1 302 311 60 24 chr10 24762190 24762357 -120826931 + MIR SINE MIR 82 254 -8 671 254 75 25 chr10 24762506 24762707 -120826581 + MER57B LTR ERV1 1 211 -223 702 232 14 0 chr10 24762948 24763090 -120826198 - L1ME3A LINE L1 -5 6165 6022 525 169 0 119 chr10 24763877 24763944 -120825344 + U13 snRNA snRNA 1 50 -54 1751 179 10 0 chr10 24763944 24764245 -120825043 + AluJo SINE Alu 4 307 -5 525 169 0 119 chr10 24764245 24764295 -120824993 + U13 snRNA snRNA 50 104 0 396 228 25 0 chr10 24764487 24764566 -120824722 + MER21B LTR ERV1 5 85 -778 1534 174 3 63 chr10 24764732 24764907 -120824381 - AluJo SINE Alu -14 298 114 198 0 0 0 chr10 24764907 24764929 -120824359 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 1996 108 41 0 chr10 24764930 24765198 -120824090 - AluSc SINE Alu -30 279 1 1534 174 3 63 chr10 24765198 24765336 -120823952 - AluJo SINE Alu -197 115 2 1459 94 14 9 chr10 24765513 24765725 -120823563 - L1MA2 LINE L1 0 6304 6092 1728 230 113 62 chr10 24765740 24766254 -120823034 + MLT1F LTR MaLR 1 540 -2 342 194 0 0 chr10 24766288 24766350 -120822938 - MSTA LTR MaLR -1 427 366 885 129 8 0 chr10 24766743 24766867 -120822421 - FLAM_C SINE Alu -18 125 1 26 50 0 0 chr10 24766867 24766907 -120822381 + AT_rich Low_complexity Low_complexity 1 40 0 2190 149 136 18 chr10 24767272 24767655 -120821633 + MSTA LTR MaLR 1 428 0 279 343 61 0 chr10 24767667 24767766 -120821522 - L2 LINE L2 0 3272 3168 929 148 0 0 chr10 24767975 24768103 -120821185 + FLAM_C SINE Alu 1 128 -5 351 0 0 0 chr10 24768509 24768548 -120820740 + (TG)n Simple_repeat Simple_repeat 2 40 0 1719 174 31 3 chr10 24768548 24768835 -120820453 - AluJb SINE Alu -17 295 1 22 35 0 0 chr10 24769502 24769531 -120819757 + AT_rich Low_complexity Low_complexity 1 29 0 804 178 0 0 chr10 24769572 24769701 -120819587 - AluJb SINE Alu -183 129 1 1032 112 0 0 chr10 24769734 24769877 -120819411 + L1PB1 LINE L1 6008 6150 -1 189 0 0 0 chr10 24770084 24770105 -120819183 + (CA)n Simple_repeat Simple_repeat 1 21 0 2594 134 7 19 chr10 24770220 24770637 -120818651 - MER50 LTR ERV1 -321 413 2 345 289 67 0 chr10 24770638 24770742 -120818546 + MER34B LTR ERV1 452 562 -3 303 311 25 19 chr10 24770769 24770930 -120818358 - LTR23 LTR ERV1 0 437 276 1753 152 0 62 chr10 24770933 24771255 -120818033 + AluJo SINE Alu 1 302 -10 1355 145 18 26 chr10 24771282 24771510 -120817778 - L1PA16 LINE L1 0 6166 5941 1080 151 73 5 chr10 24771613 24771819 -120817469 + MSTB1 LTR MaLR 213 432 0 895 192 5 96 chr10 24771991 24772122 -120817166 - MER5A DNA MER1_type 0 189 82 1770 169 36 0 chr10 24772122 24772423 -120816865 - AluSx SINE Alu 0 312 1 895 192 5 96 chr10 24772423 24772499 -120816789 - MER5A DNA MER1_type -107 82 1 744 266 107 60 chr10 24772575 24773090 -120816198 - MER34 LTR ERV1 -3 539 1 319 246 109 18 chr10 24773123 24773233 -120816055 - MIR SINE MIR -51 211 92 1822 122 0 8 chr10 24773497 24773752 -120815536 - AluSq SINE Alu -60 253 1 570 180 0 36 chr10 24773908 24774019 -120815269 + FLAM_C SINE Alu 37 143 0 25 51 0 0 chr10 24774649 24774688 -120814600 + AT_rich Low_complexity Low_complexity 1 39 0 1465 163 0 4 chr10 24774711 24774950 -120814338 + AluJo SINE Alu 75 312 0 495 33 0 0 chr10 24775580 24775641 -120813647 + (TTCC)n Simple_repeat Simple_repeat 4 64 0 1827 160 33 0 chr10 24775666 24775843 -120813445 - AluSx SINE Alu -2 310 117 207 114 0 0 chr10 24775843 24775878 -120813410 + (TG)n Simple_repeat Simple_repeat 2 36 0 1827 160 33 0 chr10 24775878 24776000 -120813288 - AluSx SINE Alu -195 117 1 222 37 0 0 chr10 24776524 24776551 -120812737 + (CA)n Simple_repeat Simple_repeat 2 28 0 854 195 19 0 chr10 24776579 24776733 -120812555 - AluJb SINE Alu -24 288 132 1815 133 3 67 chr10 24776736 24777051 -120812237 - AluSx SINE Alu -17 295 1 3484 178 11 40 chr10 24777368 24778086 -120811202 - Tigger5 DNA MER2_type -647 1676 980 1184 211 0 5 chr10 24778093 24778306 -120810982 - AluJo SINE Alu -100 212 1 475 202 22 0 chr10 24778318 24778407 -120810881 - Tigger5 DNA MER2_type -2232 91 1 2154 134 3 10 chr10 24778636 24778943 -120810345 + AluSx SINE Alu 1 305 -7 238 340 54 27 chr10 24779240 24779425 -120809863 + LTR67 LTR ERVL 64 253 -304 248 273 121 10 chr10 24779528 24779627 -120809661 + LTR67 LTR ERVL 445 554 -3 715 206 0 8 chr10 24780140 24780271 -120809017 + FLAM_C SINE Alu 2 131 -12 828 121 171 0 chr10 24781124 24781264 -120808024 + MSTA LTR MaLR 1 164 -264 853 166 6 6 chr10 24781370 24781527 -120807761 + FRAM SINE Alu 20 176 0 1681 186 7 13 chr10 24781769 24782075 -120807213 - AluJo SINE Alu -7 305 2 4002 113 51 10 chr10 24782204 24782790 -120806498 + MER4B LTR ERV1 1 610 0 22 56 0 0 chr10 24782830 24782866 -120806422 + AT_rich Low_complexity Low_complexity 1 36 0 270 0 0 0 chr10 24783443 24783473 -120805815 + (A)n Simple_repeat Simple_repeat 1 30 0 1141 157 0 16 chr10 24783473 24783664 -120805624 + AluSp SINE Alu 121 308 -5 200 122 24 0 chr10 24784376 24784417 -120804871 + (TG)n Simple_repeat Simple_repeat 1 42 0 2233 119 28 14 chr10 24784829 24785181 -120804107 - MER21A LTR ERV1 0 931 575 21 0 0 0 chr10 24785529 24785550 -120803738 + AT_rich Low_complexity Low_complexity 1 21 0 205 146 0 42 chr10 24786144 24786187 -120803101 + (TA)n Simple_repeat Simple_repeat 1 42 0 2192 117 0 10 chr10 24786187 24786486 -120802802 - AluSq SINE Alu -17 296 1 992 199 0 25 chr10 24786507 24786708 -120802580 - AluJ SINE Alu -1 311 116 327 197 15 15 chr10 24787603 24787669 -120801619 + AluJ/FLAM SINE Alu 1 66 -236 551 111 0 0 chr10 24787769 24787850 -120801438 + AluY SINE Alu 201 281 -30 3685 145 9 14 chr10 24787864 24788445 -120800843 - MER50 LTR ERV1 -156 578 1 875 165 0 15 chr10 24788471 24788604 -120800684 - AluJ SINE Alu -171 131 1 391 300 8 8 chr10 24788767 24788897 -120800391 - L3b LINE CR1 -352 1231 1102 402 162 0 29 chr10 24789104 24789172 -120800116 + AluJ/FLAM SINE Alu 3 68 -244 975 169 5 50 chr10 24789280 24789330 -120799958 - Charlie1 DNA MER1_type -199 2562 2511 1888 142 3 39 chr10 24789330 24789639 -120799649 + AluJb SINE Alu 1 298 -14 975 169 5 50 chr10 24789639 24789789 -120799499 - Charlie1 DNA MER1_type -250 2511 2371 286 314 0 0 chr10 24789794 24789864 -120799424 - Charlie1 DNA MER1_type -2690 71 2 270 280 92 46 chr10 24789889 24790107 -120799181 - L2 LINE L2 -1155 2159 1932 188 33 0 33 chr10 24790289 24790319 -120798969 + (TTG)n Simple_repeat Simple_repeat 2 30 0 817 141 31 0 chr10 24790319 24790442 -120798846 - FRAM SINE Alu -26 150 24 1297 228 92 42 chr10 24790455 24790881 -120798407 + MLT1J LTR MaLR 65 511 0 1717 162 13 36 chr10 24791034 24791342 -120797946 + AluJb SINE Alu 1 301 -11 381 282 67 41 chr10 24791393 24791588 -120797700 + LTR33 LTR ERVL 1 200 -321 383 190 0 153 chr10 24791703 24791764 -120797524 + LTR33 LTR ERVL 405 435 -86 892 140 0 22 chr10 24791764 24791900 -120797388 - FLAM_C SINE Alu 0 133 1 383 190 0 153 chr10 24791900 24791975 -120797313 + LTR33 LTR ERVL 435 520 -1 194 328 90 33 chr10 24791976 24792098 -120797190 - L2 LINE L2 -2065 1249 1121 950 210 46 25 chr10 24792281 24792519 -120796769 - MER90 LTR ERV1 -8 606 364 948 171 0 0 chr10 24792543 24792701 -120796587 - FRAM SINE Alu -1 175 18 607 304 33 8 chr10 24792708 24792951 -120796337 - MER90 LTR ERV1 -316 259 11 1979 165 0 0 chr10 24792984 24793287 -120796001 - AluJb SINE Alu -9 303 1 1010 172 5 30 chr10 24793355 24793579 -120795709 + AluJb SINE Alu 118 312 0 863 195 0 58 chr10 24794229 24794403 -120794885 + AluJo SINE Alu 22 185 -127 2556 151 38 31 chr10 24794537 24794962 -120794326 - MSTC LTR MaLR 0 428 1 2999 193 35 7 chr10 24795151 24795696 -120793592 - MER68 LTR ERV1 0 562 3 708 172 31 8 chr10 24795865 24795993 -120793295 + AluJ SINE Alu 1 131 -171 21 71 0 0 chr10 24796436 24796478 -120792810 + AT_rich Low_complexity Low_complexity 1 42 0 200 179 51 0 chr10 24796605 24796644 -120792644 + L2 LINE L2 3010 3050 -222 209 341 71 0 chr10 24797283 24797368 -120791920 + MIR SINE MIR 23 113 -95 387 303 67 0 chr10 24797368 24797487 -120791801 - L2 LINE L2 0 3313 3187 825 170 80 37 chr10 24797974 24798162 -120791126 + AluJ SINE Alu 117 312 0 1263 177 57 21 chr10 24798181 24798292 -120790996 + AluJb SINE Alu 9 115 -197 222 37 0 0 chr10 24798292 24798319 -120790969 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 1263 177 57 21 chr10 24798319 24798489 -120790799 + AluJb SINE Alu 115 300 -12 29 47 0 0 chr10 24798778 24798821 -120790467 + GC_rich Low_complexity Low_complexity 1 43 0 216 196 0 0 chr10 24800591 24800637 -120788651 + T-rich Low_complexity Low_complexity 1 46 0 204 125 0 0 chr10 24801227 24801259 -120788029 + (TTA)n Simple_repeat Simple_repeat 3 34 0 771 139 7 44 chr10 24801313 24801450 -120787838 - FRAM SINE Alu -44 132 1 282 313 111 35 chr10 24801576 24801720 -120787568 + L2 LINE L2 2895 3049 -223 513 169 0 11 chr10 24802155 24802244 -120787044 + MER4A LTR ERV1 1 88 -576 1360 142 23 28 chr10 24802254 24802557 -120786731 + MER4A LTR ERV1 261 620 -44 2031 157 0 0 chr10 24802557 24802869 -120786419 - AluSx SINE Alu 0 312 1 3874 147 43 6 chr10 24802870 24803491 -120785797 - MER4D LTR ERV1 -259 644 1 183 100 0 0 chr10 24803612 24803642 -120785646 + (TTATA)n Simple_repeat Simple_repeat 2 31 0 1612 185 3 3 chr10 24803645 24803932 -120785356 - AluJo SINE Alu -25 287 1 21 0 0 0 chr10 24803934 24803955 -120785333 + AT_rich Low_complexity Low_complexity 1 21 0 25 51 0 0 chr10 24804017 24804056 -120785232 + AT_rich Low_complexity Low_complexity 1 39 0 2284 86 0 7 chr10 24804258 24804587 -120784701 - AluY SINE Alu 0 311 1 231 114 0 0 chr10 24804870 24804905 -120784383 + (TC)n Simple_repeat Simple_repeat 1 35 0 389 295 94 13 chr10 24805214 24805363 -120783925 - MIR3 SINE MIR -11 197 37 425 285 108 0 chr10 24805753 24805911 -120783377 - MER112 DNA MER1_type -6 254 80 516 32 0 0 chr10 24806084 24806146 -120783142 + (TG)n Simple_repeat Simple_repeat 2 63 0 914 199 11 6 chr10 24806148 24806324 -120782964 - MER20 DNA MER1_type 0 219 43 1667 165 7 13 chr10 24806391 24806694 -120782594 - AluJo SINE Alu -11 301 1 1784 172 0 10 chr10 24806703 24807000 -120782288 - AluJo SINE Alu -13 299 6 2039 212 77 18 chr10 24807220 24807659 -120781629 - MER21B LTR ERV1 -11 852 388 583 183 66 36 chr10 24807705 24807842 -120781446 - MER21B LTR ERV1 -636 227 87 1527 180 0 4 chr10 24807843 24808098 -120781190 + AluJo SINE Alu 21 274 -38 254 234 0 0 chr10 24808202 24808249 -120781039 - AluJ SINE Alu -118 184 138 321 218 173 23 chr10 24808340 24808473 -120780815 + MIR3 SINE MIR 33 185 -23 372 212 182 30 chr10 24808582 24808714 -120780574 + MIR SINE MIR 47 198 -64 341 247 41 21 chr10 24808715 24808812 -120780476 + MIR SINE MIR 153 251 -11 896 150 0 0 chr10 24808963 24809096 -120780192 - AluJ SINE Alu -169 133 1 2489 87 0 0 chr10 24809590 24809900 -120779388 + AluSg SINE Alu 1 310 0 1386 167 19 68 chr10 24809919 24810230 -120779058 + AluJo SINE Alu 5 300 -12 832 200 31 19 chr10 24810289 24810449 -120778839 + AluJo SINE Alu 121 282 -30 204 67 0 0 chr10 24810624 24810654 -120778634 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 593 167 10 0 chr10 24810664 24810760 -120778528 - AluJo SINE Alu -37 275 179 * 680 189 9 0 chr10 24810759 24810870 -120778418 - AluJo SINE Alu -180 132 21 409 307 9 0 chr10 24810957 24811071 -120778217 + L2 LINE L2 3155 3269 -3 366 257 81 15 chr10 24811189 24811325 -120777963 - L1ME LINE L1 -476 5645 5501 1982 98 11 3 chr10 24812169 24812474 -120776814 - AluSx SINE Alu 0 307 1 22 56 0 0 chr10 24812854 24812890 -120776398 + AT_rich Low_complexity Low_complexity 1 36 0 282 300 0 0 chr10 24813427 24813517 -120775771 + MIR SINE MIR 63 152 -110 2175 133 0 0 chr10 24813674 24813976 -120775312 + AluSx SINE Alu 1 302 -10 1724 154 23 39 chr10 24815195 24815500 -120773788 - AluJo SINE Alu -12 300 1 246 272 22 54 chr10 24815723 24815815 -120773473 + LTR67 LTR ERVL 454 542 -15 2114 231 104 113 chr10 24815828 24816249 -120773039 - HAL1 LINE L1 -906 1601 1178 2130 127 27 0 chr10 24816249 24816548 -120772740 - AluSx SINE Alu -5 307 1 2114 231 104 113 chr10 24816548 24817603 -120771685 - HAL1 LINE L1 -1329 1178 139 234 0 0 0 chr10 24817710 24817736 -120771552 + (CAA)n Simple_repeat Simple_repeat 1 26 0 1993 137 7 10 chr10 24817755 24818062 -120771226 - AluSx SINE Alu -6 306 1 1553 182 0 52 chr10 24818299 24818413 -120770875 - AluJo SINE Alu -20 292 174 2914 77 8 0 chr10 24818413 24818765 -120770523 + THE1A LTR MaLR 1 355 0 1553 182 0 52 chr10 24818765 24818958 -120770330 - AluJo SINE Alu -138 174 1 525 340 44 6 chr10 24820052 24820281 -120769007 + MIR SINE MIR 4 237 -25 349 369 83 30 chr10 24820306 24820737 -120768551 + L2 LINE L2 2009 2462 -852 1192 186 68 79 chr10 24821378 24821744 -120767544 + MLT1A1 LTR MaLR 1 362 -3 1682 168 3 47 chr10 24822219 24822541 -120766747 - AluJb SINE Alu -4 308 1 1574 176 10 36 chr10 24822565 24822872 -120766416 - AluJo SINE Alu -13 299 1 209 250 36 83 chr10 24823268 24823331 -120765957 + L2 LINE L2 3193 3253 -19 1919 149 7 10 chr10 24823331 24823499 -120765789 - AluSx SINE Alu -11 301 133 2060 112 3 17 chr10 24823499 24823823 -120765465 - AluSc SINE Alu 0 309 1 1919 149 7 10 chr10 24823823 24823956 -120765332 - AluSx SINE Alu -179 133 1 209 250 36 83 chr10 24823956 24823976 -120765312 + L2 LINE L2 3253 3272 0 2093 89 17 3 chr10 24824697 24824988 -120764300 + AluSq SINE Alu 1 295 -18 273 312 25 64 chr10 24825227 24825384 -120763904 + MIR SINE MIR 112 262 0 719 210 12 42 chr10 24825500 24825667 -120763621 + FRAM SINE Alu 1 156 -20 1864 160 23 7 chr10 24825986 24826292 -120762996 + AluJo SINE Alu 1 311 -1 3028 171 23 37 chr10 24826579 24827000 -120762288 - Tigger5 DNA MER2_type 0 2323 1911 1649 122 191 7 chr10 24827000 24827304 -120761984 - MER46B DNA MER2_type -1 235 1 3028 171 23 37 chr10 24827304 24827483 -120761805 - Tigger5 DNA MER2_type -412 1911 1731 3147 130 16 36 chr10 24827493 24827537 -120761751 - L1PA16 LINE L1 0 6166 6123 1856 131 45 17 chr10 24827537 24827827 -120761461 + AluSx SINE Alu 1 298 -14 3147 130 16 36 chr10 24827827 24828283 -120761005 - L1PA16 LINE L1 -43 6123 5676 973 206 65 67 chr10 24828386 24828802 -120760486 - MER21A LTR ERV1 -422 441 1 1804 187 132 127 chr10 24828802 24829036 -120760252 + LTR8A LTR ERV1 42 273 -454 2083 117 0 4 chr10 24829036 24829337 -120759951 - AluSx SINE Alu 0 310 11 1804 187 132 127 chr10 24829337 24829784 -120759504 + LTR8A LTR ERV1 273 727 0 189 356 200 0 chr10 24829789 24829879 -120759409 - L2 LINE L2 -31 3241 3134 2090 152 18 3 chr10 24829908 24830243 -120759045 - LTR26B LTR ERV1 0 531 192 936 111 19 0 chr10 24830247 24830409 -120758879 + (TTTC)n Simple_repeat Simple_repeat 4 168 0 786 168 16 8 chr10 24830409 24830534 -120758754 - AluJb SINE Alu -52 260 135 1383 47 37 88 chr10 24830534 24830749 -120758539 - LTR26B LTR ERV1 -327 204 1 1975 137 6 51 chr10 24830801 24831115 -120758173 + AluSx SINE Alu 1 300 -12 3060 128 14 0 chr10 24831254 24831675 -120757613 + MSTA LTR MaLR 1 427 -1 1088 199 94 26 chr10 24831828 24832094 -120757194 - L1MB7 LINE L1 -19 6165 5882 783 207 0 21 chr10 24832738 24832878 -120756410 + AluJo SINE Alu 3 139 -173 1825 146 0 11 chr10 24832880 24833160 -120756128 + AluJo SINE Alu 11 287 -25 580 188 21 0 chr10 24833186 24833282 -120756006 + AluJ/FLAM SINE Alu 2 99 -213 886 161 0 19 chr10 24833282 24833437 -120755851 + AluJo/FRAM SINE Alu 161 312 0 1450 147 77 63 chr10 24833961 24834260 -120755028 + AluJb SINE Alu 1 303 -9 2296 90 0 3 chr10 24834355 24834654 -120754634 - AluSg SINE Alu -12 298 1 5652 72 15 0 chr10 24834826 24835507 -120753781 - LTR8 LTR ERV1 0 691 1 468 165 0 13 chr10 24835507 24835586 -120753702 - MSTB LTR MaLR -348 78 1 252 241 0 0 chr10 24835711 24835765 -120753523 + MLT1K LTR MaLR 532 585 -3 3508 150 45 20 chr10 24836031 24836617 -120752671 + LTR26E LTR ERV1 1 604 -18 1599 152 117 72 chr10 24836617 24837046 -120752242 + LTR7 LTR ERV1 1 448 -2 3508 150 45 20 chr10 24837046 24837064 -120752224 + LTR26E LTR ERV1 604 620 -2 225 296 28 0 chr10 24837232 24837303 -120751985 + MER5B DNA MER1_type 7 79 -99 180 0 0 0 chr10 24837331 24837351 -120751937 + (CG)n Simple_repeat Simple_repeat 2 21 0 * 345 24 0 0 chr10 24837350 24837392 -120751896 + (CA)n Simple_repeat Simple_repeat 1 42 0 1993 142 72 70 chr10 24837542 24837876 -120751412 + MER34C LTR ERV1 37 369 -216 2334 171 25 2 chr10 24837876 24838269 -120751019 - MER57A LTR ERV1 0 403 2 1993 142 72 70 chr10 24838269 24838290 -120750998 + MER34C LTR ERV1 369 388 -197 2172 124 0 3 chr10 24838290 24838597 -120750691 - AluSc SINE Alu -3 306 1 1993 142 72 70 chr10 24838597 24838683 -120750605 + MER34C LTR ERV1 388 480 -105 1409 187 41 41 chr10 24838679 24838973 -120750315 - MER50 LTR ERV1 -23 711 418 * 297 161 65 0 chr10 24839073 24839135 -120750153 + L1MB8 LINE L1 5225 5290 -856 839 196 8 0 chr10 24839146 24839279 -120750009 + AluJo SINE Alu 2 135 -177 1510 207 3 10 chr10 24839279 24839593 -120749695 + AluJb SINE Alu 1 312 0 1061 232 0 67 chr10 24839595 24839786 -120749502 + L1MB8 LINE L1 5300 5504 -674 1061 120 78 51 chr10 24839786 24840003 -120749285 + L1MB8 LINE L1 5945 6167 -11 1061 232 0 67 chr10 24840003 24840160 -120749128 + L1MB8 LINE L1 5504 5672 -506 2266 113 0 3 chr10 24840160 24840461 -120748827 - AluSx SINE Alu -12 300 1 1061 232 0 67 chr10 24840461 24840993 -120748295 + L1MB8 LINE L1 5672 6143 -35 2404 74 0 7 chr10 24840993 24841292 -120747996 - AluSq SINE Alu -16 297 1 1061 232 0 67 chr10 24841292 24841326 -120747962 + L1MB8 LINE L1 6143 6178 0 817 119 24 0 chr10 24841565 24841691 -120747597 - L1MA5A LINE L1 -4 6293 6165 1819 113 106 3 chr10 24841709 24841992 -120747296 - AluSx SINE Alu 0 312 1 2043 124 0 3 chr10 24842771 24843098 -120746190 - AluSx SINE Alu 0 326 1 2044 132 0 10 chr10 24843106 24843442 -120745846 - AluSx SINE Alu 0 333 1 809 257 126 5 chr10 24843485 24843699 -120745589 - MIR SINE MIR -1 261 22 1720 173 30 7 chr10 24843699 24843994 -120745294 - AluJo SINE Alu -6 306 5 2465 69 0 0 chr10 24844010 24844314 -120744974 - AluY SINE Alu -7 304 1 253 222 14 28 chr10 24845349 24845421 -120743867 + GA-rich Low_complexity Low_complexity 6 76 0 1648 156 3 63 chr10 24845836 24846151 -120743137 + AluJo SINE Alu 15 310 -2 2246 199 74 31 chr10 24846422 24846757 -120742531 - MER97a DNA MER1_type? -11 883 511 1841 116 48 24 chr10 24846757 24847050 -120742238 + AluSq SINE Alu 1 300 -13 2246 199 74 31 chr10 24847050 24847296 -120741992 - MER97a DNA MER1_type? -383 511 277 921 176 176 70 chr10 24847305 24847577 -120741711 + AluJo SINE Alu 8 308 -4 2184 109 0 32 chr10 24847595 24847906 -120741382 + AluSq SINE Alu 1 301 -12 558 259 119 13 chr10 24847906 24848142 -120741146 - MER97c DNA MER1_type? -809 281 21 1854 163 10 7 chr10 24848269 24848564 -120740724 - AluJo SINE Alu -11 301 6 1380 189 21 60 chr10 24848610 24848759 -120740529 + AluJo SINE Alu 1 135 -177 2239 115 3 0 chr10 24848759 24849055 -120740233 + AluSq SINE Alu 1 297 -16 1380 189 21 60 chr10 24849055 24849190 -120740098 + AluJo SINE Alu 135 274 -38 335 152 0 15 chr10 24849203 24849269 -120740019 + GA-rich Low_complexity Low_complexity 4 68 0 1431 157 0 0 chr10 24849281 24849498 -120739790 + AluJb SINE Alu 87 303 -9 2810 134 4 47 chr10 24849610 24850079 -120739209 + MER41B LTR ERV1 1 449 -186 1861 139 31 7 chr10 24850080 24850367 -120738921 + AluSx SINE Alu 1 294 -18 547 147 0 0 chr10 24850372 24850467 -120738821 + (GGGAA)n Simple_repeat Simple_repeat 3 97 0 204 289 0 26 chr10 24850577 24850653 -120738635 + MER5A DNA MER1_type 65 138 -51 2201 117 10 0 chr10 24850744 24851042 -120738246 + AluSg SINE Alu 1 301 -9 220 295 47 87 chr10 24851262 24851411 -120737877 + MER5A DNA MER1_type 47 189 0 367 284 55 24 chr10 24851420 24851547 -120737741 - MIR SINE MIR 0 262 132 1830 175 7 10 chr10 24851776 24852229 -120737059 + AluJo SINE Alu 1 452 0 300 283 42 58 chr10 24852946 24853066 -120736222 - MIR SINE MIR -142 120 3 2115 136 7 0 chr10 24853139 24853447 -120735841 + AluSg SINE Alu 1 310 0 1735 96 0 40 chr10 24854042 24854292 -120734996 + L1MA4A LINE L1 6045 6284 -19 520 358 118 0 chr10 24854431 24854727 -120734561 + L2 LINE L2 2520 2850 -464 2576 125 17 6 chr10 24854754 24855114 -120734174 - THE1B LTR MaLR 0 364 1 243 29 0 29 chr10 24855442 24855477 -120733811 + L1MA6 LINE L1 6114 6147 -153 1640 165 18 21 chr10 24855674 24855959 -120733329 + AluJo SINE Alu 1 284 -28 180 0 0 0 chr10 24856408 24856428 -120732860 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1863 171 3 7 chr10 24856741 24857039 -120732249 - AluJo SINE Alu -15 297 1 261 119 0 0 chr10 24857328 24857370 -120731918 + (A)n Simple_repeat Simple_repeat 1 42 0 1878 123 98 0 chr10 24857455 24857716 -120731572 + AluSg SINE Alu 1 292 -18 240 35 0 0 chr10 24857716 24857745 -120731543 + (CA)n Simple_repeat Simple_repeat 2 30 0 1878 123 98 0 chr10 24857745 24857760 -120731528 + AluSg SINE Alu 292 304 -6 385 336 89 21 chr10 24857991 24858226 -120731062 + L2 LINE L2 2252 2502 -812 315 312 42 38 chr10 24858242 24858456 -120730832 + L2 LINE L2 2775 2986 -286 906 200 29 54 chr10 24858609 24858814 -120730474 - MLT1B LTR MaLR 0 390 191 441 138 0 0 chr10 24858821 24858901 -120730387 + (GA)n Simple_repeat Simple_repeat 1 80 0 1796 128 54 27 chr10 24858939 24859236 -120730052 - AluJo SINE Alu -7 305 1 682 136 79 102 chr10 24859239 24859306 -120729982 - MLT1B LTR MaLR -217 173 106 2399 89 3 0 chr10 24859306 24859608 -120729680 - AluSq SINE Alu -10 303 1 682 136 79 102 chr10 24859608 24859717 -120729571 - MLT1B LTR MaLR -284 106 1 330 256 184 8 chr10 24859718 24859843 -120729445 + L2 LINE L2 3167 3313 0 701 222 46 75 chr10 24859888 24860127 -120729161 - MIR SINE MIR -22 240 9 27 0 0 0 chr10 24860165 24860192 -120729096 + AT_rich Low_complexity Low_complexity 1 27 0 503 278 95 27 chr10 24860199 24860462 -120728826 - L2 LINE L2 -2 3311 3031 2255 79 0 30 chr10 24862172 24862475 -120726813 + AluSp SINE Alu 1 294 -19 2109 186 180 36 chr10 24862475 24863093 -120726195 - MER39 LTR ERV1 0 707 1 2566 162 34 134 chr10 24863093 24863239 -120726049 + L1MB7 LINE L1 5189 5348 -836 1410 196 85 0 chr10 24863239 24863520 -120725768 + AluJb SINE Alu 4 308 -4 2566 162 34 134 chr10 24863520 24863879 -120725409 + L1MB7 LINE L1 5348 5586 -598 1927 152 0 34 chr10 24863879 24864202 -120725086 - AluSx SINE Alu 0 312 1 2566 162 34 134 chr10 24864202 24864507 -120724781 + L1MB7 LINE L1 5586 5920 -264 2182 114 6 16 chr10 24864609 24864925 -120724363 + AluSq SINE Alu 1 313 0 442 92 0 103 chr10 24865023 24865047 -120724241 + MLT1A1 LTR MaLR 1 26 -339 1801 136 51 90 chr10 24865047 24865437 -120723851 + THE1C LTR MaLR 1 375 0 442 92 0 103 chr10 24865437 24865499 -120723789 + MLT1A1 LTR MaLR 26 78 -287 267 176 0 20 chr10 24865498 24865549 -120723739 + MSTA LTR MaLR 379 428 0 * 711 158 0 25 chr10 24865549 24865669 -120723619 + MLT1A1 LTR MaLR 20 136 -229 2263 218 98 73 chr10 24865676 24865957 -120723331 + MER21B LTR ERV1 1 273 -590 1685 180 21 0 chr10 24865957 24866240 -120723048 - AluJo SINE Alu -23 289 1 2263 218 98 73 chr10 24866240 24866415 -120722873 + MER21B LTR ERV1 273 442 -421 4673 66 2 0 chr10 24866415 24866973 -120722315 + L1PA5 LINE L1 5595 6153 -1 2263 218 98 73 chr10 24866973 24867327 -120721961 + MER21B LTR ERV1 442 833 -30 2172 122 23 0 chr10 24867328 24867655 -120721633 - AluSx SINE Alu 0 334 1 1182 185 69 0 chr10 24867668 24867884 -120721404 + MLT1A1 LTR MaLR 132 362 -3 180 0 0 0 chr10 24868169 24868189 -120721099 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1685 137 48 11 chr10 24868191 24868461 -120720827 - AluJo SINE Alu -21 291 12 180 0 0 0 chr10 24868474 24868494 -120720794 + (TTG)n Simple_repeat Simple_repeat 2 21 0 854 94 8 24 chr10 24868502 24868629 -120720659 - FRAM SINE Alu -30 146 22 430 289 78 32 chr10 24868839 24869209 -120720079 + L1MC4 LINE L1 7444 7830 -212 967 220 0 0 chr10 24869264 24869423 -120719865 + FAM SINE Alu 1 159 -16 811 143 9 0 chr10 24869527 24869639 -120719649 - AluJb SINE Alu -194 118 6 2410 143 11 3 chr10 24870759 24871122 -120718166 + MER47A DNA MER2_type 1 366 0 1722 171 0 24 chr10 24871493 24871791 -120717497 - AluJo SINE Alu -21 291 1 734 81 0 0 chr10 24872205 24872291 -120716997 + AluSp/q SINE Alu 199 284 -29 249 169 56 70 chr10 24872310 24872381 -120716907 + MER41A LTR ERV1 364 433 -121 22 56 0 0 chr10 24872381 24872417 -120716871 + AT_rich Low_complexity Low_complexity 1 36 0 3332 211 78 21 chr10 24872527 24872880 -120716408 - MER45B DNA AcHobo -240 800 469 2700 197 50 4 chr10 24872880 24873398 -120715890 - MER34 LTR ERV1 0 542 1 3332 211 78 21 chr10 24873398 24873798 -120715490 - MER45B DNA AcHobo -571 469 4 404 207 134 177 chr10 24874224 24874456 -120714832 + MIR SINE MIR 20 241 -21 180 0 0 0 chr10 24874607 24874627 -120714661 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 774 169 0 0 chr10 24874630 24874748 -120714540 - FLAM_C SINE Alu -15 118 1 944 150 0 0 chr10 24874988 24875121 -120714167 + AluSq/x SINE Alu 1 133 -179 246 32 0 0 chr10 24875121 24875152 -120714136 + (A)n Simple_repeat Simple_repeat 1 31 0 423 94 0 0 chr10 24875306 24875359 -120713929 - Alu SINE Alu -259 53 1 1089 286 26 52 chr10 24875406 24875871 -120713417 - HAL1 LINE L1 -1509 998 546 26 30 0 0 chr10 24875894 24875927 -120713361 + AT_rich Low_complexity Low_complexity 1 33 0 814 191 0 0 chr10 24875955 24876102 -120713186 - FRAM SINE Alu -32 144 1 1451 228 53 36 chr10 24876103 24876515 -120712773 - HAL1 LINE L1 -1952 555 137 783 206 0 0 chr10 24876532 24876658 -120712630 - FLAM_A SINE Alu -6 127 2 2323 119 0 0 chr10 24876816 24877128 -120712160 - AluSx SINE Alu 0 312 1 226 367 43 0 chr10 24877157 24877296 -120711992 + L2 LINE L2 2552 2696 -618 402 369 25 25 chr10 24877377 24877575 -120711713 + L2 LINE L2 2875 3072 -200 29 0 0 0 chr10 24877925 24877954 -120711334 + AT_rich Low_complexity Low_complexity 1 29 0 1808 161 0 27 chr10 24877973 24878272 -120711016 + AluJo SINE Alu 6 296 -16 1812 151 39 3 chr10 24878397 24878707 -120710581 - AluSx SINE Alu 0 320 1 38 0 0 0 chr10 24879666 24879704 -120709584 + AT_rich Low_complexity Low_complexity 1 38 0 1949 158 3 3 chr10 24880149 24880460 -120708828 - AluJo SINE Alu 0 312 2 1927 164 0 0 chr10 24881158 24881456 -120707832 + AluJo SINE Alu 1 298 -14 200 247 72 113 chr10 24881613 24881710 -120707578 + MIR SINE MIR 82 174 -88 260 135 0 19 chr10 24881772 24881824 -120707464 + (CAT)n Simple_repeat Simple_repeat 2 52 0 593 247 54 12 chr10 24882126 24882292 -120706996 + MLT1I LTR MaLR 237 409 0 887 208 110 114 chr10 24882383 24882691 -120706597 - AluJo SINE Alu -4 308 2 781 192 0 8 chr10 24883141 24883266 -120706022 - FLAM_C SINE Alu -9 124 1 291 114 0 0 chr10 24883340 24883384 -120705904 + (GGA)n Simple_repeat Simple_repeat 3 46 0 1391 50 0 6 chr10 24883386 24883567 -120705721 + (GAA)n Simple_repeat Simple_repeat 1 180 0 555 269 21 14 chr10 24883958 24884099 -120705189 + MIR SINE MIR 9 150 -112 1754 177 3 13 chr10 24884177 24884477 -120704811 - AluJo SINE Alu -15 297 1 2179 97 0 53 chr10 24885343 24885663 -120703625 - AluY SINE Alu -8 303 1 604 148 26 35 chr10 24885668 24885783 -120703505 - FRAM SINE Alu 0 40 1 342 289 103 13 chr10 24885795 24885951 -120703337 - L1ME4a LINE L1 -6 6115 5946 1725 194 0 0 chr10 24886402 24886696 -120702592 - AluJo SINE Alu -18 294 1 2060 140 3 0 chr10 24886885 24887185 -120702103 + AluSx SINE Alu 1 301 -11 723 220 119 0 chr10 24887798 24887966 -120701322 - MER5A DNA MER1_type 0 189 2 2253 123 0 0 chr10 24887972 24888280 -120701008 - AluSx SINE Alu -2 310 3 360 264 43 61 chr10 24888687 24888850 -120700438 - MIR SINE MIR -71 191 32 205 283 0 17 chr10 24888899 24888959 -120700329 - L2 LINE L2 -1339 1975 1917 1311 158 19 142 chr10 24889073 24889396 -120699892 + AluJb SINE Alu 1 283 -19 334 94 31 0 chr10 24890441 24890505 -120698783 + (TA)n Simple_repeat Simple_repeat 2 67 0 189 0 0 0 chr10 24890505 24890526 -120698762 + (GA)n Simple_repeat Simple_repeat 2 22 0 1526 192 0 11 chr10 24890526 24890807 -120698481 - AluJo SINE Alu -34 278 1 373 159 43 0 chr10 24891113 24891182 -120698106 + MIR SINE MIR 105 176 -86 816 155 9 0 chr10 24891207 24891323 -120697965 - FLAM_C SINE Alu -25 118 2 304 224 30 0 chr10 24891324 24891391 -120697897 + MIR SINE MIR 167 235 -27 2209 117 13 0 chr10 24891783 24892081 -120697207 - AluSx SINE Alu -10 302 1 232 293 47 28 chr10 24892442 24892548 -120696740 + MIR3 SINE MIR 92 199 -9 2563 63 0 0 chr10 24893144 24893444 -120695844 - AluY SINE Alu -11 300 1 2324 119 15 0 chr10 24894088 24894424 -120694864 - L1PA13 LINE L1 -14 6149 5809 2074 122 3 20 chr10 24894861 24895157 -120694131 - AluSg SINE Alu -19 291 1 26 0 0 0 chr10 24895167 24895193 -120694095 + AT_rich Low_complexity Low_complexity 1 26 0 243 0 0 0 chr10 24895193 24895220 -120694068 + (CA)n Simple_repeat Simple_repeat 2 28 0 2051 141 0 0 chr10 24895443 24895742 -120693546 - AluSx SINE Alu -13 299 1 2175 80 0 17 chr10 24895844 24896180 -120693108 - AluY SINE Alu 0 331 1 745 257 148 43 chr10 24896186 24896817 -120692471 - L1ME3 LINE L1 -295 5850 5158 1359 149 0 14 chr10 24896818 24897032 -120692256 + AluJb SINE Alu 1 211 -101 1584 17 0 0 chr10 24897072 24897249 -120692039 + AluY SINE Alu 127 303 -8 310 305 18 24 chr10 24897325 24897492 -120691796 - L1ME3 LINE L1 -1078 5051 4886 705 234 80 48 chr10 24897531 24897882 -120691406 - L1ME3 LINE L1 -4863 1256 895 954 124 29 0 chr10 24898300 24898437 -120690851 - AluJb SINE Alu -171 141 1 286 358 55 22 chr10 24898439 24898713 -120690575 - L1ME3 LINE L1 -5710 409 127 6491 32 0 1 chr10 24899290 24900006 -120689282 - L1PA3 LINE L1 0 6155 5441 37131 40 113 2 chr10 24900106 24905101 -120684187 - L1P1 LINE L1 -579 5576 12 228 167 21 0 chr10 24905240 24905288 -120684000 + (CATATA)n Simple_repeat Simple_repeat 2 50 0 2555 177 133 4 chr10 24905448 24905935 -120683353 + MER44D DNA MER2_type 1 605 0 5944 80 47 3 chr10 24906054 24906801 -120682487 - LTR17 LTR ERV1 0 780 1 2035 116 0 27 chr10 24906912 24907205 -120682083 + AluSg1 SINE Alu 5 289 -20 212 357 123 56 chr10 24907564 24907816 -120681472 - L2 LINE L2 -4 3268 3000 672 160 5 43 chr10 24907964 24908151 -120681137 + CT-rich Low_complexity Low_complexity 1 180 0 2020 143 0 3 chr10 24908154 24908461 -120680827 - AluJb SINE Alu -6 306 1 1196 211 23 0 chr10 24910202 24910420 -120678868 + MER58A DNA MER1_type 2 224 0 916 268 121 16 chr10 24910431 24910745 -120678543 - MLT1I LTR MaLR 0 409 63 2421 159 32 25 chr10 24910761 24911169 -120678119 + LTR57 LTR ERVL 1 411 0 357 213 13 27 chr10 24911224 24911299 -120677989 - Tigger2a DNA MER2_type 0 434 361 691 169 52 70 chr10 24911299 24911449 -120677839 - L1PA16 LINE L1 -4 6162 6014 975 135 0 0 chr10 24911449 24911619 -120677669 + (TTCC)n Simple_repeat Simple_repeat 4 173 0 691 169 52 70 chr10 24911619 24911640 -120677648 - L1PA16 LINE L1 -152 6014 5994 1799 172 3 17 chr10 24911640 24911936 -120677352 - AluJb SINE Alu -20 292 1 4718 146 55 12 chr10 24911937 24912902 -120676386 - L1PA16 LINE L1 -125 6041 5018 2397 123 11 24 chr10 24912902 24913283 -120676005 - Tigger2a DNA MER2_type -58 376 1 707 219 273 44 chr10 24913594 24913909 -120675379 - LTR16A LTR ERVL -1 449 63 * 3182 143 9 28 chr10 24913907 24914447 -120674841 - MER34B LTR ERV1 -33 532 3 1133 289 51 28 chr10 24914461 24914894 -120674394 - L2 LINE L2 -2313 1001 559 244 366 12 0 chr10 24914964 24915046 -120674242 + MIR3 SINE MIR 117 199 -9 218 298 97 8 chr10 24915493 24915617 -120673671 + L2 LINE L2 3162 3296 -17 1757 159 17 21 chr10 24915618 24915907 -120673381 - AluJo SINE Alu -24 288 1 357 250 80 18 chr10 24916644 24916756 -120672532 + MIR3 SINE MIR 74 192 -16 2692 124 16 56 chr10 24917045 24917490 -120671798 - MSTA LTR MaLR -1 427 1 1113 237 85 75 chr10 24917641 24917837 -120671451 - MER34 LTR ERV1 0 542 349 672 240 0 0 chr10 24917837 24917962 -120671326 - FLAM_C SINE Alu -8 125 1 1113 237 85 75 chr10 24917962 24918297 -120670991 - MER34 LTR ERV1 -193 349 6 243 88 0 0 chr10 24918363 24918397 -120670891 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 294 50 0 0 chr10 24919007 24919047 -120670241 + (CA)n Simple_repeat Simple_repeat 1 40 0 4445 115 63 72 chr10 24919086 24919685 -120669603 - L1MC1 LINE L1 -86 6247 5657 1492 148 155 30 chr10 24919685 24919949 -120669339 + AluJb SINE Alu 1 297 -5 4445 115 63 72 chr10 24919949 24920178 -120669110 - L1MC1 LINE L1 -676 5657 5427 2324 97 0 0 chr10 24920261 24920551 -120668737 + AluSg SINE Alu 1 290 -20 399 259 0 0 chr10 24920932 24921017 -120668271 - MIR SINE MIR -148 114 30 367 280 112 85 chr10 24921120 24921569 -120667719 + MLT1L LTR MaLR 75 560 -55 920 166 0 13 chr10 24922143 24922300 -120666988 + FRAM SINE Alu 1 155 -21 21 0 0 0 chr10 24922997 24923018 -120666270 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr10 24923506 24923534 -120665754 + AT_rich Low_complexity Low_complexity 1 28 0 506 169 0 0 chr10 24924750 24924833 -120664455 + MLT1K LTR MaLR 506 588 0 272 264 41 66 chr10 24925569 24925690 -120663598 + L2 LINE L2 2141 2258 -1056 1267 208 4 12 chr10 24925692 24925947 -120663341 - AluJb SINE Alu -5 307 55 523 92 69 0 chr10 24925947 24926034 -120663254 + L1MA1 LINE L1 6106 6198 -104 825 168 7 13 chr10 24926139 24926294 -120662994 + L1MA1 LINE L1 6149 6302 0 366 127 63 16 chr10 24926310 24926373 -120662915 - AluJb SINE Alu -236 66 1 321 350 148 27 chr10 24926373 24926832 -120662456 + L2 LINE L2 2253 2824 -448 1776 156 0 49 chr10 24926832 24926971 -120662317 + AluJo SINE Alu 1 145 -167 2228 100 0 0 chr10 24926971 24927306 -120661982 + AluY SINE Alu 1 311 0 1776 156 0 49 chr10 24927306 24927494 -120661794 + AluJo SINE Alu 145 312 0 321 350 148 27 chr10 24927494 24927749 -120661539 + L2 LINE L2 2824 3047 -225 800 134 14 42 chr10 24928486 24928628 -120660660 - FLAM_C SINE Alu -1 142 5 781 259 102 13 chr10 24929839 24930075 -120659213 - MIR SINE MIR 0 262 6 228 360 54 37 chr10 24930605 24930902 -120658386 + L2 LINE L2 2065 2366 -948 23 54 0 0 chr10 24930991 24931028 -120658260 + AT_rich Low_complexity Low_complexity 1 37 0 415 255 111 74 chr10 24931055 24931271 -120658017 - MIR SINE MIR -36 226 3 330 262 108 100 chr10 24931444 24931723 -120657565 - LTR33 LTR ERVL -97 424 144 284 247 59 24 chr10 24935288 24935373 -120653915 + MIR SINE MIR 35 122 -86 1603 143 87 11 chr10 24935861 24936126 -120653162 - AluJb SINE Alu -27 285 1 23 54 0 0 chr10 24936129 24936166 -120653122 + AT_rich Low_complexity Low_complexity 1 37 0 1099 266 106 56 chr10 24936168 24936774 -120652514 - HAL1 LINE L1 -13 2494 1859 28 0 0 0 chr10 24936839 24936867 -120652421 + AT_rich Low_complexity Low_complexity 1 28 0 263 257 69 62 chr10 24937026 24937170 -120652118 - HAL1 LINE L1 -651 1856 1712 2459 105 63 0 chr10 24937176 24937510 -120651778 + THE1A LTR MaLR 1 355 0 9267 135 19 113 chr10 24937510 24939254 -120650034 + THE1A-int LTR MaLR 1 1580 0 2709 81 32 3 chr10 24939254 24939599 -120649689 + THE1A LTR MaLR 1 355 0 2492 244 96 42 chr10 24939605 24940144 -120649144 - HAL1 LINE L1 -805 1702 1193 2442 93 0 0 chr10 24940144 24940455 -120648833 - AluY SINE Alu 0 311 1 2492 244 96 42 chr10 24940455 24940883 -120648405 - HAL1 LINE L1 -1314 1193 683 1626 191 0 27 chr10 24941000 24941298 -120647990 - AluJb SINE Alu -22 290 1 471 297 91 32 chr10 24942356 24942412 -120646876 + MIR SINE MIR 25 76 -186 2217 118 8 87 chr10 24942412 24942778 -120646510 + MER1B DNA MER1_type 1 337 0 471 297 91 32 chr10 24942778 24942940 -120646348 + MIR SINE MIR 76 256 -6 31 44 0 0 chr10 24942971 24943016 -120646272 + AT_rich Low_complexity Low_complexity 1 45 0 2218 113 0 22 chr10 24943626 24943944 -120645344 - AluSq SINE Alu -2 311 1 1229 62 0 6 chr10 24944353 24944513 -120644775 + AluY SINE Alu 139 297 -14 455 94 0 0 chr10 24944546 24944610 -120644678 + L1MA9 LINE L1 6087 6150 -162 345 109 0 0 chr10 24944764 24944819 -120644469 + (TG)n Simple_repeat Simple_repeat 2 56 0 247 317 195 6 chr10 24945122 24945286 -120644002 + MIR SINE MIR 3 197 -65 27 87 0 0 chr10 24945286 24945355 -120643933 + AT_rich Low_complexity Low_complexity 1 69 0 2099 162 58 31 chr10 24945474 24946002 -120643286 + MLT2A2 LTR ERVL 1 554 0 22 56 0 0 chr10 24946101 24946137 -120643151 + AT_rich Low_complexity Low_complexity 1 36 0 456 305 63 47 chr10 24946547 24946959 -120642329 - L1MC4a LINE L1 -395 5726 5416 1827 170 0 0 chr10 24946959 24947276 -120642012 - AluJo SINE Alu 0 317 1 456 305 63 47 chr10 24947276 24947312 -120641976 - L1MC4a LINE L1 -705 5416 5382 1528 195 9 46 chr10 24947641 24947989 -120641299 - L1MB8 LINE L1 -3 6175 5841 342 251 82 86 chr10 24947964 24948207 -120641081 - L1MB8 LINE L1 -1095 5051 4810 * 867 181 0 0 chr10 24948256 24948400 -120640888 - FRAM SINE Alu -32 144 1 444 291 26 62 chr10 24948401 24948573 -120640715 - L1MB8 LINE L1 -1396 4750 4585 2102 133 0 0 chr10 24948573 24948886 -120640402 - AluSx SINE Alu 0 313 1 444 291 26 62 chr10 24948886 24948939 -120640349 - L1MB8 LINE L1 -1561 4585 4532 1882 155 14 0 chr10 24949475 24949753 -120639535 - AluJo SINE Alu -30 282 1 629 272 87 5 chr10 24951481 24951665 -120637623 + MIR SINE MIR 32 230 -32 1562 176 0 65 chr10 24952521 24952827 -120636461 - AluJo SINE Alu -6 306 21 210 244 0 0 chr10 24952959 24953000 -120636288 + L2 LINE L2 3226 3266 -6 1807 162 81 8 chr10 24953658 24954053 -120635235 - L1MD1 LINE L1 0 6636 6213 932 167 7 0 chr10 24954053 24954203 -120635085 + FRAM SINE Alu 1 149 -27 7789 225 47 27 chr10 24954237 24955665 -120633623 - L1MD1 LINE L1 -458 6178 4780 1704 184 0 7 chr10 24955665 24955947 -120633341 - AluSx SINE Alu -32 280 1 7789 225 47 27 chr10 24955947 24956401 -120632887 - L1MD1 LINE L1 -1856 4780 4336 2139 134 3 0 chr10 24956401 24956700 -120632588 + AluSx SINE Alu 1 300 -12 7789 225 47 27 chr10 24956700 24958159 -120631129 - L1MD1 LINE L1 -2300 4336 2769 1776 148 64 15 chr10 24958173 24958579 -120630709 - L1MD1 LINE L1 -3890 2650 2225 2641 221 63 3 chr10 24958581 24959196 -120630092 + MER82 DNA MER2_type 1 652 -1 4195 208 75 24 chr10 24959205 24959715 -120629573 - L1MD1 LINE L1 -4477 2063 1580 252 0 0 0 chr10 24959715 24959743 -120629545 + (TA)n Simple_repeat Simple_repeat 2 29 0 4195 208 75 24 chr10 24959743 24960503 -120628785 - L1MD1 LINE L1 -4960 1580 656 201 162 0 0 chr10 24962777 24962814 -120626474 + A-rich Low_complexity Low_complexity 1 37 0 1565 185 0 73 chr10 24962865 24963179 -120626109 - AluJo SINE Alu -21 291 1 2373 74 0 26 chr10 24963765 24964077 -120625211 + AluY SINE Alu 1 304 -7 1866 199 8 8 chr10 24964379 24964755 -120624533 + L1M3e LINE L1 466 841 -6648 2493 259 19 34 chr10 24964953 24965874 -120623414 + L1M3e LINE L1 1885 2791 -4774 302 277 66 36 chr10 24965904 24966041 -120623247 + L1ME4a LINE L1 5366 5506 -615 712 312 23 0 chr10 24966053 24966271 -120623017 + MIR SINE MIR 33 255 -7 578 271 74 11 chr10 24966308 24966592 -120622696 + L1ME4a LINE L1 5527 5828 -293 924 42 0 0 chr10 24966613 24966731 -120622557 - L1PA4 LINE L1 -3 6152 6035 22 0 0 0 chr10 24966823 24966845 -120622443 + AT_rich Low_complexity Low_complexity 1 22 0 238 171 0 0 chr10 24967041 24967082 -120622206 - MLT1B LTR MaLR 0 390 350 829 190 13 25 chr10 24967108 24967266 -120622022 - FRAM SINE Alu -10 156 1 1530 168 21 4 chr10 24967789 24968069 -120621219 + MLT1B LTR MaLR 1 285 -105 1059 328 133 24 chr10 24968766 24969752 -120619536 - L2 LINE L2 -2 3270 2182 725 71 0 0 chr10 24969921 24970019 -120619269 - L1PB3 LINE L1 -1 6153 6056 759 240 76 26 chr10 24970381 24970897 -120618391 - MLT2F LTR ERVL -4 659 80 385 253 34 68 chr10 24972523 24972669 -120616619 - MLT1K LTR MaLR -1 587 447 297 0 0 0 chr10 24972848 24972881 -120616407 + (CA)n Simple_repeat Simple_repeat 1 33 0 846 263 60 101 chr10 24973107 24973709 -120615579 + MER77 LTR ERV1 24 601 -4 183 216 27 0 chr10 24974242 24974279 -120615009 + L2 LINE L2 3191 3228 -85 1801 233 69 67 chr10 24974281 24974934 -120614354 - MER76 LTR ERV -34 654 1 273 273 13 26 chr10 24974934 24975011 -120614277 + L2 LINE L2 3181 3256 -16 15401 63 17 1 chr10 24977825 24980662 -120608626 - L1PA6 LINE L1 0 6154 3288 32120 41 1 2 chr10 24980683 24985658 -120603630 - L1PA4 LINE L1 0 6155 1218 13125 132 10 19 chr10 24985785 24988036 -120601252 - L1PA6 LINE L1 -3905 2241 13 1769 149 14 0 chr10 24988293 24988582 -120600706 + L1PB4 LINE L1 5861 6153 -3 516 278 72 61 chr10 24989315 24989721 -120599567 - L1MC5 LINE L1 -37 7924 7507 2323 107 3 0 chr10 24989721 24990031 -120599257 - AluSp SINE Alu -2 311 1 516 278 72 61 chr10 24990031 24990231 -120599057 - L1MC5 LINE L1 -454 7507 7311 2683 36 0 0 chr10 24990235 24990542 -120598746 - AluY SINE Alu -4 307 1 216 310 0 0 chr10 24991629 24991687 -120597601 - MIR SINE MIR -139 123 66 2026 149 3 13 chr10 24991861 24992176 -120597112 - AluSx SINE Alu 0 312 1 1840 166 3 28 chr10 24992346 24992666 -120596622 + AluJb SINE Alu 1 312 0 890 137 0 30 chr10 24993358 24993489 -120595799 - FLAM_C SINE Alu -16 127 1 240 264 25 41 chr10 24994710 24994831 -120594457 + LTR67 LTR ERVL 428 546 -11 1769 160 19 41 chr10 24996322 24996640 -120592648 - AluJo SINE Alu -1 311 1 1891 158 3 13 chr10 24996949 24997247 -120592041 + AluJo SINE Alu 6 300 -12 476 263 56 25 chr10 24997433 24997593 -120591695 - MIR SINE MIR -1 261 97 865 165 0 0 chr10 24998258 24998391 -120590897 - FLAM_C SINE Alu 0 133 1 272 322 68 0 chr10 24998494 24998640 -120590648 - MER103 DNA DNA -8 158 3 2070 130 0 13 chr10 24999134 24999441 -120589847 - AluSx SINE Alu -9 303 1 1563 220 54 2 chr10 25000758 25001163 -120588125 - LTR16A LTR ERVL -1 449 24 1480 194 7 44 chr10 25001702 25001995 -120587293 - AluJo SINE Alu -30 282 1 770 228 72 5 chr10 25002054 25002247 -120587041 + MIR SINE MIR 47 252 -10 419 324 118 15 chr10 25002341 25002545 -120586743 - MIR SINE MIR -15 247 23 1471 67 5 0 chr10 25002593 25002787 -120586501 - L1PA7 LINE L1 0 6154 5960 3572 118 5 5 chr10 25004244 25004796 -120584492 - L1PA14 LINE L1 -1 6160 5609 223 133 17 17 chr10 25005907 25005967 -120583321 + (TA)n Simple_repeat Simple_repeat 1 60 0 332 291 82 72 chr10 25006331 25006650 -120582638 + L1ME3A LINE L1 5849 6170 0 2220 114 3 0 chr10 25006717 25007016 -120582272 - AluSx SINE Alu -12 300 1 358 256 0 0 chr10 25007147 25007225 -120582063 - MIR SINE MIR -17 245 168 1772 167 21 15 chr10 25007237 25007573 -120581715 - MER2 DNA MER2_type 0 345 8 272 270 183 22 chr10 25007818 25007955 -120581333 - L2 LINE L2 0 3272 3114 200 385 28 0 chr10 25008410 25008519 -120580769 + L2 LINE L2 3160 3271 -42 2094 135 0 0 chr10 25009506 25009803 -120579485 + AluSx SINE Alu 1 297 -15 292 189 0 40 chr10 25010144 25010218 -120579070 - Charlie7 DNA MER1_type -2507 105 35 1671 170 3 10 chr10 25010746 25011034 -120578254 - AluJo SINE Alu -26 286 1 697 221 25 65 chr10 25011409 25011555 -120577733 + MIR SINE MIR 16 153 -109 818 176 0 15 chr10 25011555 25011686 -120577602 + FLAM_C SINE Alu 1 129 -4 697 221 25 65 chr10 25011686 25011738 -120577550 + MIR SINE MIR 153 206 -56 216 274 16 16 chr10 25011885 25011947 -120577341 + L2 LINE L2 3155 3216 -56 * 539 208 39 15 chr10 25011943 25012073 -120577215 - MIR SINE MIR -91 171 39 439 251 86 23 chr10 25012264 25012439 -120576849 - MIR SINE MIR -57 205 20 27 0 0 0 chr10 25012754 25012781 -120576507 + AT_rich Low_complexity Low_complexity 1 27 0 2335 72 13 0 chr10 25013835 25014141 -120575147 + AluY SINE Alu 1 310 -1 284 231 0 0 chr10 25014207 25014259 -120575029 - MER5B DNA MER1_type -124 54 3 1904 142 61 17 chr10 25014637 25014996 -120574292 + THE1C LTR MaLR 1 375 0 2070 145 0 3 chr10 25015102 25015406 -120573882 + AluSx SINE Alu 1 303 -9 286 291 126 28 chr10 25016254 25016612 -120572676 + L1ME LINE L1 3493 3885 -2261 2088 120 10 0 chr10 25016993 25017285 -120572003 + AluSx SINE Alu 1 295 -17 334 351 18 7 chr10 25017345 25017630 -120571658 + L1ME LINE L1 4522 4809 -1337 38 0 0 0 chr10 25017991 25018029 -120571259 + AT_rich Low_complexity Low_complexity 1 38 0 695 228 14 7 chr10 25018079 25018224 -120571064 - FRAM SINE Alu -30 146 1 379 295 110 28 chr10 25018269 25018669 -120570619 + L1ME LINE L1 5319 5751 -370 329 181 0 110 chr10 25018951 25019078 -120570210 + L1M4 LINE L1 5195 5307 -839 4905 244 58 54 chr10 25019107 25020937 -120568351 + L1M4 LINE L1 17 1838 -4806 2189 129 0 0 chr10 25020937 25021232 -120568056 + AluSg SINE Alu 1 295 -15 4905 244 58 54 chr10 25021232 25021570 -120567718 + L1M4 LINE L1 1838 2173 -4471 1996 161 0 0 chr10 25021570 25021869 -120567419 - AluSx SINE Alu -13 299 1 4905 244 58 54 chr10 25021869 25022100 -120567188 + L1M4 LINE L1 2173 2402 -4242 4563 138 8 25 chr10 25022100 25022904 -120566384 - L1MA6 LINE L1 0 6300 5511 4905 244 58 54 chr10 25022904 25023793 -120565495 + L1M4 LINE L1 2402 3331 -3313 855 75 8 0 chr10 25023867 25023987 -120565301 + L1PB2 LINE L1 6028 6148 -3 281 135 19 0 chr10 25024063 25024115 -120565173 + C-rich Low_complexity Low_complexity 3 55 0 2060 120 0 0 chr10 25024120 25024395 -120564893 - AluSx SINE Alu -37 275 1 712 296 104 27 chr10 25024396 25024846 -120564442 - L1MEc LINE L1 -3200 3340 2856 336 267 10 0 chr10 25024989 25025090 -120564198 - L1MC4 LINE L1 -13 8029 7928 240 295 0 0 chr10 25025123 25025184 -120564104 + A-rich Low_complexity Low_complexity 3 63 0 239 226 113 67 chr10 25025260 25025455 -120563833 - L1MEc LINE L1 -3906 2642 2431 2091 121 20 3 chr10 25025537 25025834 -120563454 + AluSx SINE Alu 1 302 -10 304 305 43 51 chr10 25025930 25026186 -120563102 - L1MEc LINE L1 -5597 933 680 237 175 0 0 chr10 25026947 25026987 -120562301 + MIR SINE MIR 77 116 -146 871 245 14 92 chr10 25027241 25027534 -120561754 - MER102b DNA MER1_type -1091 337 75 2036 147 0 6 chr10 25027534 25027846 -120561442 + AluSx SINE Alu 1 310 -2 871 245 14 92 chr10 25027846 25027911 -120561377 - MER102b DNA MER1_type -1353 75 7 1429 215 57 16 chr10 25028862 25029248 -120560040 - MLT1C LTR MaLR -1 466 65 1020 175 0 27 chr10 25029254 25029437 -120559851 + Tigger4(Zombi) DNA MER2_type 1 178 -2553 12460 122 35 15 chr10 25029442 25031528 -120557760 + Tigger4(Zombi) DNA MER2_type 568 2694 -37 240 123 88 35 chr10 25031529 25031586 -120557702 - MLT1C LTR MaLR -407 60 1 256 200 33 78 chr10 25031757 25031847 -120557441 - MIR3 SINE MIR -4 204 119 24 67 0 0 chr10 25031959 25032004 -120557284 + AT_rich Low_complexity Low_complexity 1 45 0 1328 253 58 20 chr10 25032577 25032817 -120556471 + L1MC4 LINE L1 7437 7666 -376 2048 134 0 0 chr10 25032817 25033109 -120556179 - AluJb SINE Alu -19 293 2 1328 253 58 20 chr10 25033109 25033314 -120555974 + L1MC4 LINE L1 7666 7899 -143 307 309 133 39 chr10 25033444 25033700 -120555588 - L1M4 LINE L1 -1571 4575 4296 423 296 79 54 chr10 25033775 25033895 -120555393 - L1M4 LINE L1 -1921 4225 4109 467 110 44 11 chr10 25033895 25033986 -120555302 - L1MA5A LINE L1 -5 6292 6199 423 296 79 54 chr10 25033986 25034460 -120554828 - L1M4 LINE L1 -2037 4109 3616 1786 133 4 0 chr10 25034938 25035194 -120554094 + AluSg SINE Alu 38 294 -16 27 62 0 0 chr10 25035257 25035305 -120553983 + AT_rich Low_complexity Low_complexity 1 48 0 287 301 75 23 chr10 25035604 25035777 -120553511 - L1MC/D LINE L1 -1933 5875 5694 243 288 0 14 chr10 25035800 25035873 -120553415 - LTR33A LTR ERVL 0 523 452 1433 320 17 10 chr10 25036673 25037266 -120552022 - ERVL LTR ERVL -382 5382 4786 482 286 57 21 chr10 25037397 25037589 -120551699 - ERVL LTR ERVL -1161 4603 4405 1718 173 36 19 chr10 25038247 25038606 -120550682 - MLT1A1 LTR MaLR 0 365 1 207 186 0 0 chr10 25039047 25039090 -120550198 + (CATATA)n Simple_repeat Simple_repeat 1 43 0 31 0 0 0 chr10 25039148 25039179 -120550109 + AT_rich Low_complexity Low_complexity 1 31 0 1827 78 0 12 chr10 25040474 25040717 -120548571 + AluY SINE Alu 72 311 0 275 291 127 37 chr10 25040781 25040915 -120548373 - MIR3 SINE MIR -38 170 25 351 235 20 20 chr10 25041823 25041921 -120547367 + MER3 DNA MER1_type 5 102 -107 1658 199 3 16 chr10 25041933 25042240 -120547048 + AluJb SINE Alu 1 303 -9 2687 129 65 17 chr10 25042244 25042334 -120546954 + L1MA3 LINE L1 5760 5844 -461 1813 148 75 31 chr10 25042334 25042693 -120546595 + THE1C LTR MaLR 1 375 0 2687 129 65 17 chr10 25042693 25043123 -120546165 + L1MA3 LINE L1 5844 6305 0 390 134 85 0 chr10 25043143 25043225 -120546063 + MER3 DNA MER1_type 104 192 -17 293 327 200 32 chr10 25043898 25044424 -120544864 - L2 LINE L2 -2441 873 260 219 316 163 0 chr10 25046710 25046808 -120542480 + L2 LINE L2 3155 3268 -4 3190 144 61 15 chr10 25047507 25048096 -120541192 + Ricksha DNA DNA 9 624 -1422 802 119 0 30 chr10 25048101 25048235 -120541053 + Ricksha DNA DNA 1056 1185 -861 1787 144 0 0 chr10 25048355 25048612 -120540676 + AluSq SINE Alu 1 257 -56 314 258 197 1 chr10 25048833 25049141 -120540147 + LTR16A LTR ERVL 52 450 0 2077 153 7 0 chr10 25049526 25049834 -120539454 - AluSx SINE Alu 0 312 3 388 333 81 52 chr10 25050225 25050317 -120538971 + L1MEd LINE L1 601 689 -1801 200 125 25 0 chr10 25050317 25050357 -120538931 + A-rich Low_complexity Low_complexity 3 43 0 388 333 81 52 chr10 25050357 25050947 -120538341 + L1MEd LINE L1 689 1551 -939 1770 142 68 4 chr10 25050974 25051255 -120538033 + AluSx SINE Alu 13 311 -1 392 267 184 26 chr10 25051825 25052517 -120536771 + L1ME3 LINE L1 2872 3672 -2457 365 204 23 11 chr10 25052639 25052727 -120536561 - MER74A LTR ERVL 0 558 470 723 137 8 0 chr10 25052751 25052868 -120536420 - MER74A LTR ERVL -440 118 1 336 268 109 22 chr10 25052874 25053012 -120536276 + HsTC2a DNA Tc2 66 215 -529 341 280 156 32 chr10 25053076 25053294 -120535994 + L1ME3 LINE L1 4999 5243 -886 429 238 82 105 chr10 25053321 25053469 -120535819 + L1ME3 LINE L1 5315 5465 -680 1788 150 7 31 chr10 25053469 25053762 -120535526 - AluJo SINE Alu -22 290 5 429 238 82 105 chr10 25053762 25053928 -120535360 + L1ME3 LINE L1 5465 5622 -523 969 244 90 18 chr10 25053999 25054331 -120534957 - LTR16B LTR ERVL -2 462 107 314 311 61 0 chr10 25054438 25054570 -120534718 + L1ME3 LINE L1 5725 5864 -281 40725 52 4 3 chr10 25054646 25060792 -120528496 - L1PA4 LINE L1 0 6155 1 24 85 0 0 chr10 25061365 25061424 -120527864 + AT_rich Low_complexity Low_complexity 1 59 0 28 0 0 0 chr10 25062260 25062288 -120527000 + AT_rich Low_complexity Low_complexity 1 28 0 1205 269 99 54 chr10 25062377 25063299 -120525989 - HAL1 LINE L1 -112 2395 1433 23 0 0 0 chr10 25063299 25063322 -120525966 + AT_rich Low_complexity Low_complexity 1 23 0 573 286 83 67 chr10 25063665 25064113 -120525175 - HAL1 LINE L1 -1504 1003 549 1946 251 64 16 chr10 25064126 25064764 -120524524 - L1ME1 LINE L1 -18 6217 5549 359 210 59 8 chr10 25064774 25064893 -120524395 - L1ME1 LINE L1 -1433 4782 4658 5391 265 109 44 chr10 25065042 25066391 -120522897 + L1MEc LINE L1 35 1295 -4920 2337 80 0 7 chr10 25066391 25066690 -120522598 + AluY SINE Alu 1 297 -14 5391 265 109 44 chr10 25066690 25066902 -120522386 + L1MEc LINE L1 1295 1492 -4723 1529 184 9 57 chr10 25066902 25067218 -120522070 + AluJo SINE Alu 12 312 0 5391 265 109 44 chr10 25067218 25067819 -120521469 + L1MEc LINE L1 1492 2053 -4162 2358 121 49 0 chr10 25067819 25068184 -120521104 - L1PA16 LINE L1 -9 6157 5775 5391 265 109 44 chr10 25068184 25068359 -120520929 + L1MEc LINE L1 2053 2215 -4000 7329 29 17 1 chr10 25068359 25069667 -120519621 + L1PA3 LINE L1 4830 6152 -3 5391 265 109 44 chr10 25069667 25071596 -120517692 + L1MEc LINE L1 2215 4584 -1631 338 44 0 0 chr10 25071714 25071759 -120517529 + L1PA16 LINE L1 6112 6156 -10 725 273 74 0 chr10 25071775 25072086 -120517202 - L1ME1 LINE L1 -4041 2355 2022 285 75 0 0 chr10 25073087 25073127 -120516161 + (CA)n Simple_repeat Simple_repeat 1 40 0 2049 147 46 0 chr10 25073133 25073481 -120515807 - MER47A DNA MER2_type 0 366 3 1678 177 49 57 chr10 25073558 25073926 -120515362 - MLT1A1 LTR MaLR 0 365 1 1116 205 77 48 chr10 25073944 25073985 -120515303 + MER76 LTR ERV 1 39 -649 2242 82 0 7 chr10 25073985 25074277 -120515011 - AluY SINE Alu -21 290 1 1116 205 77 48 chr10 25074277 25074797 -120514491 + MER76 LTR ERV 39 667 -21 2336 71 0 14 chr10 25075559 25075854 -120513434 + AluY SINE Alu 10 300 -11 252 231 0 0 chr10 25079296 25079374 -120509914 + (TA)n Simple_repeat Simple_repeat 1 78 0 480 35 0 0 chr10 25079775 25079833 -120509455 + (TG)n Simple_repeat Simple_repeat 1 58 0 234 245 20 0 chr10 25080281 25080330 -120508958 + polypyrimidine Low_complexity Low_complexity 1 50 0 230 244 0 26 chr10 25080344 25080422 -120508866 + (TATATG)n Simple_repeat Simple_repeat 2 77 0 465 300 93 20 chr10 25080502 25080652 -120508636 - L2 LINE L2 -4 3268 3108 229 333 43 26 chr10 25084624 25084741 -120504547 - L2 LINE L2 -1 3271 3153 308 273 91 0 chr10 25084867 25084977 -120504311 + L2 LINE L2 3153 3272 0 1855 155 7 30 chr10 25085682 25085985 -120503303 + AluJb SINE Alu 1 296 -16 291 212 106 47 chr10 25086693 25086778 -120502510 - MIR3 SINE MIR -35 173 84 1015 187 4 3 chr10 25086881 25087118 -120502170 - AluJb SINE Alu -14 298 2 316 233 110 7 chr10 25087400 25087513 -120501775 - MIR3 SINE MIR -2 206 78 253 327 19 28 chr10 25087608 25087715 -120501573 + MIR SINE MIR 22 127 -135 940 199 0 0 chr10 25087716 25087882 -120501406 - FRAM SINE Alu 0 166 1 407 288 18 68 chr10 25087906 25088069 -120501219 + L2 LINE L2 3159 3313 0 1443 314 70 10 chr10 25088211 25089110 -120500178 + L2 LINE L2 2360 3313 0 418 293 16 0 chr10 25089106 25089229 -120500059 + MIR SINE MIR 138 262 0 * 387 0 0 0 chr10 25090760 25090803 -120498485 + (CA)n Simple_repeat Simple_repeat 2 44 0 23 54 0 0 chr10 25090899 25090936 -120498352 + AT_rich Low_complexity Low_complexity 1 37 0 1198 60 7 0 chr10 25090938 25091087 -120498201 - AluY SINE Alu -129 182 33 434 262 105 47 chr10 25091588 25091760 -120497528 + MER63A DNA MER1_type 29 210 0 206 214 24 0 chr10 25091800 25091842 -120497446 + CT-rich Low_complexity Low_complexity 3 45 0 502 237 68 96 chr10 25091876 25092095 -120497193 - MER58C DNA MER1_type -2 213 1 487 223 18 12 chr10 25092140 25092306 -120496982 + (TA)n Simple_repeat Simple_repeat 1 167 0 5828 195 49 25 chr10 25092368 25094853 -120494435 - L1MB7 LINE L1 0 6184 3641 1579 149 67 0 chr10 25095550 25095832 -120493456 + L1PB4 LINE L1 5854 6154 -2 1998 146 44 39 chr10 25096064 25096426 -120492862 - THE1B LTR MaLR 0 364 1 317 325 32 32 chr10 25096474 25096631 -120492657 - MIR3 SINE MIR -49 159 3 208 304 215 18 chr10 25096663 25096968 -120492320 - L2 LINE L2 -338 2975 2615 1744 180 0 16 chr10 25097339 25097650 -120491638 + AluJo SINE Alu 5 310 -2 234 286 39 26 chr10 25097849 25097926 -120491362 - MIR SINE MIR -108 154 77 240 244 24 12 chr10 25098141 25098223 -120491065 + (TGAA)n Simple_repeat Simple_repeat 1 83 0 1016 174 42 46 chr10 25099272 25099513 -120489775 + MLT1D LTR MaLR 6 245 -260 478 179 120 0 chr10 25099578 25099695 -120489593 + MLT1D LTR MaLR 370 500 -5 408 333 94 44 chr10 25101944 25102349 -120486939 + L2 LINE L2 2209 2633 -681 456 238 21 28 chr10 25102355 25102498 -120486790 - LTR16A1 LTR ERVL 0 457 316 210 224 105 79 chr10 25102608 25102684 -120486604 + L2 LINE L2 2898 2975 -338 1935 166 15 100 chr10 25102791 25103272 -120486016 - LTR47B LTR ERVL 0 443 4 23 0 0 0 chr10 25103800 25103823 -120485465 + AT_rich Low_complexity Low_complexity 1 23 0 342 282 19 0 chr10 25105421 25105524 -120483764 - MIR SINE MIR 0 262 158 495 108 0 36 chr10 25106191 25106274 -120483014 - MADE1 DNA Mariner 0 80 1 328 130 29 0 chr10 25106915 25106984 -120482304 + GA-rich Low_complexity Low_complexity 1 71 0 2720 147 18 74 chr10 25107074 25107394 -120481894 + L1MB5 LINE L1 5578 5914 -260 1886 162 0 3 chr10 25107394 25107716 -120481572 + AluJo SINE Alu 3 312 0 2720 147 18 74 chr10 25107716 25107746 -120481542 + L1MB5 LINE L1 5914 5944 -230 2046 95 15 4 chr10 25107746 25108019 -120481269 + AluSc SINE Alu 17 292 -17 2720 147 18 74 chr10 25108019 25108291 -120480997 + L1MB5 LINE L1 5944 6166 -8 21 36 0 0 chr10 25108427 25108455 -120480833 + AT_rich Low_complexity Low_complexity 1 28 0 2103 132 26 59 chr10 25110025 25110481 -120478807 + L1MB3 LINE L1 5736 6176 -7 268 286 167 0 chr10 25110793 25110877 -120478411 - MIR SINE MIR -122 140 43 255 241 46 11 chr10 25111103 25111190 -120478098 - MLT1L LTR MaLR -353 262 173 23 0 0 0 chr10 25111524 25111547 -120477741 + AT_rich Low_complexity Low_complexity 1 23 0 2426 151 31 24 chr10 25111912 25112337 -120476951 - MSTA LTR MaLR 0 428 1 30 0 0 0 chr10 25114451 25114481 -120474807 + AT_rich Low_complexity Low_complexity 1 30 0 2940 33 10 0 chr10 25114499 25114888 -120474400 + L1P LINE L1 4994 5386 -760 1753 117 0 22 chr10 25115073 25115347 -120473941 - AluY SINE Alu -4 307 40 2259 108 3 10 chr10 25115376 25115673 -120473615 + AluSx SINE Alu 3 297 -15 21 36 0 0 chr10 25115696 25115724 -120473564 + AT_rich Low_complexity Low_complexity 1 28 0 6751 62 19 0 chr10 25115747 25116779 -120472509 - L1PA7 LINE L1 -6 6148 5131 440 51 0 0 chr10 25116780 25116839 -120472449 + L1PA7 LINE L1 5061 5119 -1027 4638 187 69 18 chr10 25116839 25118003 -120471285 - L1MC1 LINE L1 -5 6328 5225 2312 82 7 0 chr10 25118003 25118296 -120470992 - AluY SINE Alu -16 295 1 4638 187 69 18 chr10 25118296 25119158 -120470130 - L1MC1 LINE L1 -1108 5225 4078 2305 175 7 12 chr10 25119180 25119757 -120469531 - MER72 LTR ERV1 -28 694 82 2102 221 45 22 chr10 25119758 25120361 -120468927 - L1MC1 LINE L1 -2057 4089 3473 541 248 57 52 chr10 25120377 25120607 -120468681 - MER2 DNA MER2_type -1 344 114 864 242 49 0 chr10 25120608 25120914 -120468374 - L1MC1 LINE L1 -2860 3286 2966 2018 130 3 0 chr10 25121110 25121395 -120467893 - AluSx SINE Alu -14 298 13 25 31 0 0 chr10 25121423 25121455 -120467833 + AT_rich Low_complexity Low_complexity 1 32 0 1050 221 105 3 chr10 25121490 25121784 -120467504 + MER2 DNA MER2_type 11 334 -11 24 32 0 0 chr10 25122153 25122184 -120467104 + AT_rich Low_complexity Low_complexity 1 31 0 2132 125 0 16 chr10 25122380 25122683 -120466605 - AluSx SINE Alu -14 298 1 291 257 64 105 chr10 25122744 25122900 -120466388 - L1ME3A LINE L1 -232 5938 5777 1189 109 15 25 chr10 25122900 25123101 -120466187 - L1PA13 LINE L1 -5 6158 5960 291 257 64 105 chr10 25123101 25123286 -120466002 - L1ME3A LINE L1 -393 5777 5611 932 104 0 0 chr10 25123322 25123470 -120465818 - AluSg/x SINE Alu 0 303 156 574 274 19 14 chr10 25123470 25123858 -120465430 - L1ME3A LINE L1 -603 5567 5177 410 228 32 51 chr10 25123859 25124017 -120465271 - L1MA10 LINE L1 -4 6330 6176 * 690 211 22 28 chr10 25123994 25124174 -120465114 - L1ME LINE L1 -471 5695 5517 616 270 68 73 chr10 25124169 25124629 -120464659 - L1ME3A LINE L1 -953 5193 4737 * 1758 176 0 10 chr10 25124629 25124919 -120464369 - AluJo SINE Alu -25 287 1 616 270 68 73 chr10 25124919 25125251 -120464037 - L1ME3A LINE L1 -1409 4737 4405 2146 95 18 3 chr10 25125303 25125587 -120463701 - AluSc SINE Alu -21 288 1 2106 273 70 38 chr10 25126833 25127106 -120462182 - L2 LINE L2 0 3313 3050 2026 158 52 3 chr10 25127106 25127474 -120461814 + L1PB4 LINE L1 5757 6142 -14 2106 273 70 38 chr10 25127474 25128319 -120460969 - L2 LINE L2 -263 3050 2157 1703 189 11 3 chr10 25128468 25128753 -120460535 - AluJo SINE Alu -25 287 1 1056 115 0 0 chr10 25128887 25129026 -120460262 + AluSg/x SINE Alu 149 287 -25 211 229 16 33 chr10 25129429 25129490 -120459798 + CT-rich Low_complexity Low_complexity 4 63 0 483 316 143 23 chr10 25130018 25130369 -120458919 - L2 LINE L2 -553 2761 2369 360 280 49 35 chr10 25130372 25130446 -120458842 - L2 LINE L2 -1251 2063 1992 2645 147 7 16 chr10 25130446 25130876 -120458412 - MSTB LTR MaLR 0 426 1 360 280 49 35 chr10 25130876 25130944 -120458344 - L2 LINE L2 -1322 1992 1919 216 365 51 26 chr10 25132011 25132167 -120457121 - L2 LINE L2 -181 3091 2932 1497 231 12 34 chr10 25132776 25133192 -120456096 - MLT2D LTR ERVL -7 407 1 359 236 0 0 chr10 25133302 25133374 -120455914 + L2 LINE L2 3242 3313 0 2303 147 24 22 chr10 25134125 25134504 -120454784 + MSTB1 LTR MaLR 15 397 -35 2463 81 0 0 chr10 25134504 25134812 -120454476 - AluY SINE Alu -2 309 2 2303 147 24 22 chr10 25134812 25134847 -120454441 + MSTB1 LTR MaLR 397 430 -2 186 369 50 30 chr10 25136225 25136423 -120452865 + L2 LINE L2 200 401 -2913 378 330 17 8 chr10 25136424 25136542 -120452746 + L2 LINE L2 3153 3271 -1 496 211 12 23 chr10 25136542 25136713 -120452575 + GA-rich Low_complexity Low_complexity 1 169 0 319 371 88 17 chr10 25136757 25137110 -120452178 + L2 LINE L2 444 821 -2493 737 345 124 16 chr10 25137182 25137506 -120451782 + L2 LINE L2 1782 2070 -1244 2133 111 17 0 chr10 25137506 25137795 -120451493 - AluSc SINE Alu -14 295 2 737 345 124 16 chr10 25137795 25138454 -120450834 + L2 LINE L2 2070 2871 -443 193 274 179 34 chr10 25138684 25138801 -120450487 + L2 LINE L2 3180 3313 0 494 70 14 0 chr10 25139025 25139096 -120450192 + (TTCCC)n Simple_repeat Simple_repeat 4 75 0 1882 166 0 6 chr10 25139105 25139418 -120449870 - AluSx SINE Alu 0 312 2 445 275 75 44 chr10 25140951 25141111 -120448177 - MIR SINE MIR -40 222 58 261 340 107 55 chr10 25141984 25142275 -120447013 + L2 LINE L2 2958 3263 -9 241 344 22 11 chr10 25143438 25143528 -120445760 + MIR SINE MIR 35 125 -83 1741 171 0 43 chr10 25144033 25144355 -120444933 - AluJo SINE Alu -4 308 1 23 20 8 0 chr10 25144748 25144818 -120444470 + AT_rich Low_complexity Low_complexity 1 30 0 3875 198 50 26 chr10 25144840 25145598 -120443690 - L1MB3 LINE L1 -8 6175 5437 2275 122 0 0 chr10 25145598 25145910 -120443378 - AluSx SINE Alu 0 312 1 3875 198 50 26 chr10 25145910 25146659 -120442629 - L1MB3 LINE L1 -746 5437 4635 303 214 0 0 chr10 25146698 25146768 -120442520 + CT-rich Low_complexity Low_complexity 1 70 0 1716 158 0 0 chr10 25146768 25147028 -120442260 - AluSq SINE Alu -1 312 53 2893 180 30 2 chr10 25147028 25147672 -120441616 - L1MB3 LINE L1 -1504 4642 3981 276 305 78 16 chr10 25147785 25147913 -120441375 + MIR SINE MIR 6 141 -121 961 127 0 0 chr10 25148752 25148878 -120440410 + FLAM_C SINE Alu 1 126 -17 1093 180 9 73 chr10 25149062 25149295 -120439993 + AluJo SINE Alu 1 218 -94 3081 142 9 4 chr10 25149359 25149910 -120439378 - L1P LINE L1 -3004 3142 2589 11371 112 24 6 chr10 25149910 25150214 -120439074 + L1PA8A LINE L1 3199 3496 -2650 195 42 0 0 chr10 25150214 25150238 -120439050 + (CAA)n Simple_repeat Simple_repeat 1 24 0 11371 112 24 6 chr10 25150238 25151796 -120437492 + L1PA8A LINE L1 3496 5094 -1052 454 141 0 0 chr10 25151870 25151948 -120437340 - MSTB1 LTR MaLR 0 432 355 5956 74 16 0 chr10 25152007 25152991 -120436297 + L1PA8A LINE L1 5098 6095 -36 440 111 0 37 chr10 25153023 25153104 -120436184 - MSTB1 LTR MaLR 0 432 355 2371 38 72 0 chr10 25153276 25153566 -120435722 - AluY SINE Alu 0 311 1 1705 148 71 41 chr10 25153613 25153977 -120435311 + THE1C LTR MaLR 1 375 0 2115 143 0 9 chr10 25154637 25154985 -120434303 - AluSx SINE Alu 0 345 1 836 135 0 57 chr10 25155547 25155688 -120433600 + FLAM_C SINE Alu 1 133 -10 442 281 0 25 chr10 25156472 25156593 -120432695 + L2 LINE L2 3188 3305 -8 4102 132 6 60 chr10 25157071 25157800 -120431488 - LTR8 LTR ERV1 0 691 3 300 272 126 0 chr10 25159661 25159764 -120429524 - MLT1J2 LTR MaLR -61 389 274 410 257 184 11 chr10 25159795 25159974 -120429314 - MLT1J2 LTR MaLR -240 210 1 311 26 0 0 chr10 25160948 25160986 -120428302 + U2 snRNA snRNA 1 38 -150 7599 25 4 0 chr10 25161308 25162244 -120427044 - L1P LINE L1 -1245 4901 3962 1119 318 64 7 chr10 25162440 25163065 -120426223 + MER115 DNA AcHobo 1 692 -1 254 239 65 154 chr10 25163287 25163580 -120425708 - L2 LINE L2 -739 2575 2309 180 0 0 0 chr10 25164433 25164453 -120424835 + (TA)n Simple_repeat Simple_repeat 2 21 0 39 68 0 0 chr10 25164640 25164714 -120424574 + AT_rich Low_complexity Low_complexity 1 74 0 2175 118 0 10 chr10 25164773 25165077 -120424211 - AluSx SINE Alu -11 301 1 3391 129 63 3 chr10 25165159 25165757 -120423531 - LTR24C LTR ERV1 -1 634 1 2178 118 7 3 chr10 25166027 25166332 -120422956 - AluSg SINE Alu -3 307 2 1986 184 36 2 chr10 25166570 25166983 -120422305 - MER89 LTR ERV1 -131 428 2 394 281 48 0 chr10 25166986 25167132 -120422156 - L1ME3A LINE L1 -329 5841 5689 1780 178 40 0 chr10 25167866 25168187 -120421101 + MER7A DNA MER2_type 12 343 -3 7954 197 49 47 chr10 25168245 25168794 -120420494 - L1MA10 LINE L1 -43 6527 5981 2167 97 0 0 chr10 25168794 25169072 -120420216 - AluSq SINE Alu -33 280 3 7954 197 49 47 chr10 25169072 25170530 -120418758 - L1MA10 LINE L1 -589 5981 4527 1690 146 0 4 chr10 25170530 25170791 -120418497 - AluSx SINE Alu -17 295 36 7954 197 49 47 chr10 25170791 25171182 -120418106 - L1MA10 LINE L1 -2043 4527 4138 1489 126 31 0 chr10 25171182 25171405 -120417883 + MER30 DNA MER1_type 1 230 0 7954 197 49 47 chr10 25171405 25172131 -120417157 - L1MA10 LINE L1 -2432 4138 3393 1219 239 35 37 chr10 25172128 25172891 -120416397 - L1MA10 LINE L1 -3588 2794 2030 * 449 351 76 54 chr10 25172994 25173593 -120415695 + L2 LINE L2 2589 3198 -74 202 225 0 0 chr10 25173634 25173674 -120415614 + (CATA)n Simple_repeat Simple_repeat 3 42 0 196 287 181 11 chr10 25173677 25173771 -120415517 + MIR3 SINE MIR 47 156 -52 210 302 23 47 chr10 25175382 25175468 -120413820 - L2 LINE L2 0 3272 3189 1710 203 3 13 chr10 25176006 25176317 -120412971 + AluJo SINE Alu 1 308 -4 322 315 101 39 chr10 25176387 25176565 -120412723 - MIR3 SINE MIR -7 201 13 444 372 13 13 chr10 25177489 25177720 -120411568 + MIR SINE MIR 22 252 -10 327 311 0 0 chr10 25177998 25178088 -120411200 - L1MC4 LINE L1 -1339 6703 6614 686 119 53 35 chr10 25178113 25178383 -120410905 + (CATATA)n Simple_repeat Simple_repeat 1 274 0 307 318 0 0 chr10 25178386 25178474 -120410814 - L1MC4 LINE L1 -1341 6701 6614 * 361 197 46 0 chr10 25178458 25178567 -120410721 - L1MCa LINE L1 -1339 6983 1995 344 273 23 0 chr10 25178492 25178580 -120410708 + L1MC4 LINE L1 6614 6703 -1339 * 313 244 47 23 chr10 25178586 25178672 -120410616 - L1MC4 LINE L1 -1339 6703 6616 251 231 0 22 chr10 25178673 25178764 -120410524 - L1MC4 LINE L1 -1340 6702 6614 251 157 20 0 chr10 25178765 25178816 -120410472 + (TA)n Simple_repeat Simple_repeat 2 53 0 198 0 0 0 chr10 25178817 25178839 -120410449 + (TATG)n Simple_repeat Simple_repeat 3 24 0 1625 176 3 7 chr10 25178844 25179128 -120410160 - AluJb SINE Alu -29 283 1 844 207 17 81 chr10 25179340 25179698 -120409590 - L1MC5 LINE L1 -48 7913 7579 2323 87 0 34 chr10 25180573 25180895 -120408393 - AluY SINE Alu 0 311 1 3294 177 81 30 chr10 25183425 25184170 -120405118 - LTR39 LTR ERV1 0 783 1 416 252 52 26 chr10 25184293 25184408 -120404880 + MIR SINE MIR 37 154 -108 306 0 0 0 chr10 25184434 25184468 -120404820 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 2121 127 3 0 chr10 25184473 25184756 -120404532 - AluSx SINE Alu -28 284 1 1450 182 4 16 chr10 25184960 25185213 -120404075 - AluJo SINE Alu -26 286 37 380 288 94 24 chr10 25185395 25185551 -120403737 - MIR SINE MIR -74 188 18 2107 130 140 8 chr10 25185551 25185929 -120403359 - MSTA LTR MaLR 0 428 1 380 288 94 24 chr10 25185929 25185942 -120403346 - MIR SINE MIR -244 18 7 2142 153 67 21 chr10 25186975 25187407 -120401881 - MLT1C LTR MaLR -15 452 1 6050 64 0 4 chr10 25188802 25189581 -120399707 + L1PA7 LINE L1 5376 6151 -3 524 272 131 15 chr10 25189709 25189915 -120399373 - MIR SINE MIR 0 262 33 469 234 32 24 chr10 25191006 25191130 -120398158 - MIR SINE MIR -24 238 114 795 285 98 30 chr10 25191328 25191756 -120397532 + LTR16A LTR ERVL 1 457 0 195 42 0 0 chr10 25191969 25191993 -120397295 + (CA)n Simple_repeat Simple_repeat 1 24 0 4656 105 10 31 chr10 25193004 25193778 -120395510 + L1PA13 LINE L1 5400 6157 -6 2033 96 68 7 chr10 25193825 25194118 -120395170 + AluSq SINE Alu 1 311 -2 651 336 111 38 chr10 25195764 25196288 -120393000 + L1MEd LINE L1 458 1019 -5511 333 242 91 28 chr10 25196632 25196884 -120392404 + L1MEd LINE L1 1345 1612 -4918 469 330 57 9 chr10 25196924 25197151 -120392137 + HAL1 LINE L1 1361 1598 -909 379 286 93 6 chr10 25197534 25197716 -120391572 + L1MEd LINE L1 2384 2581 -3959 243 223 69 34 chr10 25197719 25197894 -120391394 + L1M4 LINE L1 4249 4429 -1717 2178 135 8 3 chr10 25197933 25198288 -120391000 + MER47A DNA MER2_type 1 357 -9 275 237 11 0 chr10 25198289 25198382 -120390906 + (TCTA)n Simple_repeat Simple_repeat 4 97 0 * 282 149 18 54 chr10 25198369 25198537 -120390751 + (TA)n Simple_repeat Simple_repeat 1 162 0 225 97 65 32 chr10 25198549 25198611 -120390677 + (CTATA)n Simple_repeat Simple_repeat 2 65 0 2767 180 160 31 chr10 25199110 25199959 -120389329 - L1MB7 LINE L1 -2 6182 5227 604 277 88 36 chr10 25200076 25200495 -120388793 - L1ME4a LINE L1 -202 5919 5479 247 287 35 27 chr10 25200937 25201086 -120388202 + MIR SINE MIR 18 259 -3 193 286 0 71 chr10 25201801 25201885 -120387403 - MIR3 SINE MIR -6 202 125 26 0 0 27 chr10 25201957 25201974 -120387314 + AT_rich Low_complexity Low_complexity 1 17 -19 2536 65 0 0 chr10 25201974 25202281 -120387007 + AluY SINE Alu 1 307 -4 26 0 0 27 chr10 25202281 25202300 -120386988 + AT_rich Low_complexity Low_complexity 17 36 0 1638 112 4 4 chr10 25202882 25202901 -120386387 - AluSg/x SINE Alu 0 312 294 208 0 0 0 chr10 25202901 25202924 -120386364 + (TTTG)n Simple_repeat Simple_repeat 1 180 0 1638 112 4 4 chr10 25202924 25203136 -120386152 - AluSg/x SINE Alu -17 295 69 532 107 13 0 chr10 25203136 25203211 -120386077 + AluS SINE Alu 5 80 -232 331 315 9 18 chr10 25204030 25204141 -120385147 - MIR3 SINE MIR -2 206 97 911 194 0 13 chr10 25204419 25204574 -120384714 + AluJo SINE Alu 1 153 -159 375 278 0 0 chr10 25204590 25204680 -120384608 - L1MC4 LINE L1 -1339 6703 6614 347 300 0 0 chr10 25204606 25204696 -120384592 + L1MC4 LINE L1 6614 6703 -1339 * 225 178 0 0 chr10 25204702 25204747 -120384541 + (CA)n Simple_repeat Simple_repeat 2 46 0 484 85 71 7 chr10 25204843 25204984 -120384304 + (TA)n Simple_repeat Simple_repeat 1 150 0 865 301 48 0 chr10 25205730 25206019 -120383269 + MLT1J LTR MaLR 1 303 -208 280 333 131 18 chr10 25206411 25206579 -120382709 + MIR3 SINE MIR 20 206 -2 375 23 0 0 chr10 25207705 25207749 -120381539 + (TG)n Simple_repeat Simple_repeat 1 44 0 2153 188 25 58 chr10 25209729 25210260 -120379028 - MLT1E2 LTR MaLR -111 515 3 220 272 19 38 chr10 25210492 25210599 -120378689 + GA-rich Low_complexity Low_complexity 1 105 0 1753 172 0 13 chr10 25210603 25210911 -120378377 + AluJb SINE Alu 3 306 -6 2426 87 6 0 chr10 25210959 25211270 -120378018 + AluSq SINE Alu 1 313 0 269 50 0 25 chr10 25211270 25211310 -120377978 + (TA)n Simple_repeat Simple_repeat 2 40 0 399 310 16 0 chr10 25211420 25211549 -120377739 - MER94 DNA DNA -2 132 2 453 313 58 50 chr10 25212363 25212622 -120376666 + MIR SINE MIR 1 261 -1 488 128 21 64 chr10 25213009 25213103 -120376185 + AluJo SINE Alu 128 217 -95 240 297 74 74 chr10 25213523 25213671 -120375617 - L2 LINE L2 0 3272 3125 697 213 40 23 chr10 25213729 25213903 -120375385 + MER5B DNA MER1_type 2 178 0 354 250 0 0 chr10 25214130 25214198 -120375090 - L2 LINE L2 -11 3302 3235 331 330 80 17 chr10 25214227 25214403 -120374885 + MER5A DNA MER1_type 3 189 0 185 281 46 78 chr10 25214469 25214622 -120374666 - L2 LINE L2 -219 3053 2906 205 191 0 21 chr10 25217200 25217247 -120372041 + GA-rich Low_complexity Low_complexity 1 46 0 510 114 0 0 chr10 25217278 25217357 -120371931 + (TAGG)n Simple_repeat Simple_repeat 1 79 0 270 95 0 0 chr10 25217433 25217475 -120371813 + (CA)n Simple_repeat Simple_repeat 2 43 0 885 186 166 77 chr10 25217726 25218133 -120371155 + L1 LINE L1 4950 5391 -775 337 225 0 25 chr10 25218390 25218470 -120370818 - HAL1b LINE L1 -437 911 834 3369 213 70 22 chr10 25218528 25219341 -120369947 - MER21B LTR ERV1 -11 852 1 2076 110 120 3 chr10 25219357 25219683 -120369605 - THE1B LTR MaLR 0 364 1 532 254 15 0 chr10 25219743 25219873 -120369415 + MIR SINE MIR 131 262 0 1044 106 14 0 chr10 25219967 25220108 -120369180 + AluSg/x SINE Alu 156 298 -14 306 305 99 46 chr10 25220327 25220478 -120368810 - L1MEd LINE L1 -4905 1214 1056 635 262 57 9 chr10 25220996 25221206 -120368082 - L2 LINE L2 0 3313 3094 1043 241 147 105 chr10 25221284 25221978 -120367310 - L2 LINE L2 -728 2586 1864 719 82 49 8 chr10 25222525 25222647 -120366641 + MLT1B LTR MaLR 1 127 -263 1034 143 11 0 chr10 25222944 25223126 -120366162 + MLT1B LTR MaLR 131 314 -76 1174 185 0 151 chr10 25223137 25223254 -120366034 - L1PB4 LINE L1 0 6156 6023 1749 137 29 22 chr10 25223254 25223531 -120365757 + AluJb SINE Alu 1 279 -33 1174 185 0 151 chr10 25223531 25223797 -120365491 - L1PB4 LINE L1 -133 6023 5831 475 157 34 12 chr10 25223799 25223904 -120365384 + MLT1B LTR MaLR 300 388 -2 1752 192 0 23 chr10 25224150 25224452 -120364836 - AluJb SINE Alu -17 295 1 373 312 148 8 chr10 25224702 25224939 -120364349 - L1ME LINE L1 -333 5788 5519 2066 141 10 0 chr10 25225067 25225372 -120363916 - AluSx SINE Alu -4 308 1 2283 114 3 0 chr10 25226769 25227066 -120362222 - AluSq SINE Alu -15 298 1 744 344 20 4 chr10 25227508 25227761 -120361527 + MIR SINE MIR 6 262 0 447 273 43 22 chr10 25227839 25227978 -120361310 - L2 LINE L2 -297 3016 2875 2050 132 0 0 chr10 25228439 25228778 -120360510 - AluSx SINE Alu 0 340 2 1164 288 58 27 chr10 25230300 25230993 -120358295 - HAL1 LINE L1 -1734 773 10 557 325 150 15 chr10 25230996 25231351 -120357937 + L2 LINE L2 1813 2119 -1195 19888 94 23 3 chr10 25231351 25235066 -120354222 - L1PA7 LINE L1 0 6154 2377 557 325 150 15 chr10 25235066 25235365 -120353923 + L2 LINE L2 2119 2555 -759 400 292 92 0 chr10 25235564 25235684 -120353604 + L2 LINE L2 3142 3272 0 738 94 0 0 chr10 25236191 25236297 -120352991 + L1PA5 LINE L1 6048 6153 -1 275 330 93 25 chr10 25237098 25237216 -120352072 + L2 LINE L2 3141 3266 -6 1827 124 148 9 chr10 25237286 25237625 -120351663 - MSTA LTR MaLR 0 428 43 41645 41 2 1 chr10 25237625 25243766 -120345522 - L1PA3 LINE L1 -1 6154 10 313 185 0 0 chr10 25243775 25243829 -120345459 - MSTA LTR MaLR -374 54 1 331 280 120 63 chr10 25244136 25244311 -120344977 - MER5A DNA MER1_type -4 185 1 209 191 0 0 chr10 25244414 25244456 -120344832 + (TATG)n Simple_repeat Simple_repeat 2 43 0 197 294 0 0 chr10 25244791 25244842 -120344446 + MIR SINE MIR 103 153 -55 260 208 0 14 chr10 25245033 25245105 -120344183 + (TA)n Simple_repeat Simple_repeat 1 71 0 264 154 0 0 chr10 25245726 25245778 -120343510 + (TATATG)n Simple_repeat Simple_repeat 3 54 0 238 286 0 0 chr10 25245853 25245909 -120343379 + MIR3 SINE MIR 151 206 -2 1944 184 3 0 chr10 25247441 25247824 -120341464 - AluJb SINE Alu 0 384 1 2793 213 38 7 chr10 25247994 25248601 -120340687 + MLT1E2 LTR MaLR 1 626 0 464 317 30 18 chr10 25249275 25249442 -120339846 - L2 LINE L2 -436 2878 2710 436 268 23 5 chr10 25249683 25249820 -120339468 + MIR SINE MIR 56 192 -58 898 202 93 75 chr10 25249925 25250311 -120338977 + MSTD LTR MaLR 1 393 -3 531 293 130 19 chr10 25250603 25250684 -120338604 - MIR SINE MIR -24 238 167 288 0 0 0 chr10 25250684 25250716 -120338572 + (TTA)n Simple_repeat Simple_repeat 2 33 0 531 293 130 19 chr10 25250716 25250842 -120338446 - MIR SINE MIR -95 167 8 21 0 0 0 chr10 25251026 25251047 -120338241 + AT_rich Low_complexity Low_complexity 1 21 0 285 51 0 0 chr10 25251125 25251164 -120338124 + (CA)n Simple_repeat Simple_repeat 2 40 0 2199 161 19 38 chr10 25251297 25251719 -120337569 - MLT2D LTR ERVL 0 414 1 265 310 34 56 chr10 25251801 25252069 -120337219 - L1MC/D LINE L1 -2264 5544 5283 7675 24 4 2 chr10 25253460 25254701 -120334587 - L1PA3 LINE L1 0 6155 4915 379 42 0 0 chr10 25254702 25254750 -120334538 + 5S rRNA rRNA 1 48 -73 270 0 0 0 chr10 25255736 25255766 -120333522 + (T)n Simple_repeat Simple_repeat 1 30 0 300 329 19 52 chr10 25255974 25256129 -120333159 + MIR3 SINE MIR 20 169 -39 705 282 75 9 chr10 25257186 25257399 -120331889 - MIR SINE MIR -15 247 21 314 291 28 85 chr10 25257464 25257605 -120331683 - MIR SINE MIR -83 179 47 228 111 0 0 chr10 25257605 25257641 -120331647 + (T)n Simple_repeat Simple_repeat 1 36 0 195 352 62 31 chr10 25258595 25258757 -120330531 - MIR3 SINE MIR -26 182 16 2213 152 10 2 chr10 25259175 25259570 -120329718 - L1PA16 LINE L1 0 6166 5769 4369 66 0 2 chr10 25259570 25260130 -120329158 - L1PA6 LINE L1 0 6154 5593 2280 165 28 28 chr10 25260439 25260864 -120328424 + MSTB LTR MaLR 1 425 -1 410 256 188 23 chr10 25260939 25261072 -120328216 - MER5B DNA MER1_type -1 177 23 272 243 83 19 chr10 25261138 25261282 -120328006 - MIR SINE MIR 0 208 56 520 246 0 74 chr10 25261792 25261967 -120327321 - L2 LINE L2 -2 3311 3150 * 588 225 130 12 chr10 25261958 25262127 -120327161 - MIR SINE MIR -57 205 17 337 323 127 13 chr10 25262144 25262431 -120326857 - L2 LINE L2 -212 3101 2782 23 0 0 0 chr10 25262440 25262463 -120326825 + AT_rich Low_complexity Low_complexity 1 23 0 3854 125 36 5 chr10 25262619 25263252 -120326036 - L1PA16 LINE L1 0 6166 5514 1720 157 0 9 chr10 25263252 25263576 -120325712 - L1P4 LINE L1 -573 5593 5273 681 348 13 16 chr10 25264770 25265033 -120324255 - MIR SINE MIR 0 262 3 187 286 143 48 chr10 25265110 25265236 -120324052 + L2 LINE L2 3100 3237 -35 1017 274 134 25 chr10 25265416 25265886 -120323402 - LTR33 LTR ERVL 0 521 1 204 229 0 0 chr10 25265974 25266022 -120323266 - L2 LINE L2 -1 3312 3265 4963 165 28 7 chr10 25268211 25269140 -120320148 - L1MC1 LINE L1 0 6333 5385 1371 151 12 4 chr10 25269571 25269816 -120319472 - MLT2D LTR ERVL -167 247 1 265 310 34 56 chr10 25269898 25270166 -120319122 - L1MC/D LINE L1 -2264 5544 5283 18292 34 0 0 chr10 25271558 25274546 -120314742 - L1PA3 LINE L1 0 6155 3166 851 183 7 108 chr10 25274788 25275067 -120314221 + MLT1A1 LTR MaLR 115 365 0 183 281 56 11 chr10 25275380 25275469 -120313819 + MIR SINE MIR 47 139 -123 252 143 0 0 chr10 25275831 25275873 -120313415 + (A)n Simple_repeat Simple_repeat 1 42 0 370 298 78 27 chr10 25275940 25276131 -120313157 + MIR SINE MIR 9 213 -49 892 246 106 47 chr10 25276131 25276517 -120312771 + MLT1I LTR MaLR 1 409 0 370 298 78 27 chr10 25276517 25276567 -120312721 + MIR SINE MIR 213 259 -3 1751 230 37 7 chr10 25277151 25277612 -120311676 + MER39 LTR ERV1 233 707 0 1256 108 0 0 chr10 25278563 25278749 -120310539 - L1PA12 LINE L1 -191 5977 5792 820 239 86 17 chr10 25279703 25280541 -120308747 - L1ME3A LINE L1 -70 6100 5216 267 264 34 34 chr10 25280763 25280911 -120308377 - L1ME3A LINE L1 -1812 4334 4187 * 504 266 54 20 chr10 25280900 25281103 -120308185 - L1ME3A LINE L1 -2462 3684 3475 261 222 32 0 chr10 25281437 25281500 -120307788 - MER20B DNA MER1_type -718 65 1 2089 139 3 10 chr10 25281554 25281863 -120307425 + AluSx SINE Alu 1 307 -5 321 253 0 0 chr10 25281863 25281951 -120307337 + GA-rich Low_complexity Low_complexity 6 96 0 246 218 0 0 chr10 25281993 25282048 -120307240 - MER112 DNA MER1_type -111 149 95 991 233 66 66 chr10 25282419 25282887 -120306401 + L1ME3 LINE L1 5379 5846 -316 1707 133 52 3 chr10 25282929 25283253 -120306035 + L1MB2 LINE L1 5804 6143 -28 214 189 19 0 chr10 25283503 25283532 -120305756 + (TA)n Simple_repeat Simple_repeat 1 33 -21 207 0 0 0 chr10 25283532 25283555 -120305733 + (TG)n Simple_repeat Simple_repeat 2 24 0 214 189 19 0 chr10 25283555 25283578 -120305710 + (TA)n Simple_repeat Simple_repeat 33 54 0 24 0 0 0 chr10 25283917 25283941 -120305347 + AT_rich Low_complexity Low_complexity 1 24 0 1177 48 0 0 chr10 25285708 25285853 -120303435 - L1PA3 LINE L1 -3 6152 6008 261 0 0 0 chr10 25286015 25286044 -120303244 + (CTTG)n Simple_repeat Simple_repeat 4 32 0 1515 167 8 12 chr10 25286044 25286294 -120302994 - AluJb SINE Alu -55 257 7 322 264 28 0 chr10 25286294 25286366 -120302922 + MIR3 SINE MIR 85 158 -50 * 324 354 113 70 chr10 25286361 25286731 -120302557 + L2 LINE L2 2881 3266 -6 662 240 27 38 chr10 25286742 25286925 -120302363 - L2 LINE L2 0 3313 3133 481 341 44 36 chr10 25287530 25287782 -120301506 + MIR SINE MIR 8 261 -1 186 43 0 0 chr10 25289590 25289613 -120299675 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 227 434 7 0 chr10 25290286 25290422 -120298866 - L2 LINE L2 -189 3083 2947 1837 158 4 4 chr10 25290544 25290823 -120298465 - AluJo SINE Alu -23 289 11 241 185 31 0 chr10 25291274 25291339 -120297949 + GA-rich Low_complexity Low_complexity 3 69 0 890 197 8 38 chr10 25291667 25291906 -120297382 + L1MD3 LINE L1 7763 7994 -1 2034 145 7 0 chr10 25292910 25293207 -120296081 + AluSc SINE Alu 1 299 -10 185 132 26 0 chr10 25293231 25293269 -120296019 + CT-rich Low_complexity Low_complexity 3 41 0 1568 276 18 12 chr10 25294005 25294515 -120294773 - L1MEc LINE L1 -5847 549 37 1870 146 24 0 chr10 25295042 25295330 -120293958 + AluSq SINE Alu 1 295 -18 1547 207 32 45 chr10 25295393 25295833 -120293455 - MLT1C LTR MaLR 0 467 34 390 227 25 8 chr10 25295880 25295999 -120293289 + LTR33 LTR ERVL 1 121 -400 384 134 12 37 chr10 25296620 25296702 -120292586 + MER116 DNA Mariner 1 80 0 6777 66 75 0 chr10 25296722 25297473 -120291815 - L1PA7 LINE L1 -16 6138 5347 2244 119 0 31 chr10 25297473 25297792 -120291496 - AluSc SINE Alu 0 309 1 6777 66 75 0 chr10 25297792 25298140 -120291148 - L1PA7 LINE L1 -807 5347 5026 2106 88 28 3 chr10 25298162 25298445 -120290843 - AluSc SINE Alu -19 290 1 255 186 0 0 chr10 25298451 25298494 -120290794 - tRNA-Leu-CTT tRNA tRNA -42 43 1 711 209 27 0 chr10 25299654 25299802 -120289486 + MER45A DNA AcHobo 1 152 -26 23 54 0 0 chr10 25300617 25300654 -120288634 + AT_rich Low_complexity Low_complexity 1 37 0 292 230 58 11 chr10 25301176 25301263 -120288025 + L1M4 LINE L1 5495 5585 -599 357 24 0 0 chr10 25301490 25301532 -120287756 + (TG)n Simple_repeat Simple_repeat 1 42 0 765 48 0 29 chr10 25301543 25301647 -120287641 - L1PA8 LINE L1 -7 6165 6065 255 210 0 32 chr10 25301729 25301791 -120287497 + (TATATG)n Simple_repeat Simple_repeat 5 64 0 4123 189 28 19 chr10 25302054 25302620 -120286668 - L1MB8 LINE L1 -1 6177 5618 2179 117 3 3 chr10 25302620 25302927 -120286361 - AluSq SINE Alu -6 307 1 4123 189 28 19 chr10 25302927 25303390 -120285898 - L1MB8 LINE L1 -560 5618 5134 1999 129 81 35 chr10 25303390 25303738 -120285550 - THE1B LTR MaLR 0 364 1 4123 189 28 19 chr10 25303738 25303880 -120285408 - L1MB8 LINE L1 -1044 5134 4995 1913 174 10 22 chr10 25303878 25304281 -120285007 + L1MA7 LINE L1 5791 6188 -103 * 773 149 0 0 chr10 25304283 25304417 -120284871 + MER4B LTR ERV1 1 134 -476 3706 155 38 6 chr10 25304419 25305108 -120284180 - MER50 LTR ERV1 -23 711 1 3478 144 123 3 chr10 25305110 25305769 -120283519 + MER4D LTR ERV1 132 869 -34 2669 74 0 0 chr10 25305771 25306136 -120283152 + L1PA8A LINE L1 5559 5923 -208 22 56 0 0 chr10 25306137 25306173 -120283115 + AT_rich Low_complexity Low_complexity 1 36 0 3053 69 16 0 chr10 25306234 25306665 -120282623 + L1PA8A LINE L1 5677 6169 -3 474 299 8 8 chr10 25306949 25307066 -120282222 - MIR SINE MIR -118 144 28 206 356 66 7 chr10 25307755 25307889 -120281399 + MIR SINE MIR 11 154 -62 315 285 111 21 chr10 25307946 25308090 -120281198 + MIR SINE MIR 48 204 -58 620 127 6 158 chr10 25308106 25308264 -120281024 + AluJb SINE Alu 1 134 -178 349 372 42 37 chr10 25309708 25309899 -120279389 - MIR3 SINE MIR -7 201 10 480 269 45 8 chr10 25310919 25311087 -120278201 - MIR SINE MIR -21 187 6 22 35 0 0 chr10 25312223 25312252 -120277036 + AT_rich Low_complexity Low_complexity 1 29 0 210 298 66 58 chr10 25312842 25312963 -120276325 - MIR SINE MIR -64 144 23 490 297 126 36 chr10 25313445 25314058 -120275230 - HAL1 LINE L1 -1304 1203 536 252 250 83 0 chr10 25315610 25315694 -120273594 + L3 LINE CR1 1392 1482 -95 283 286 82 73 chr10 25315732 25315952 -120273336 - MIR SINE MIR -33 229 8 414 0 0 0 chr10 25316121 25316167 -120273121 + (TC)n Simple_repeat Simple_repeat 1 46 0 2108 123 0 0 chr10 25316167 25316449 -120272839 - AluSq SINE Alu -28 285 1 348 253 133 52 chr10 25316513 25316837 -120272451 - MLT1H LTR MaLR -142 407 58 2340 139 50 38 chr10 25316866 25317289 -120271999 - MSTA LTR MaLR 0 428 1 239 250 23 23 chr10 25317337 25317425 -120271863 - MLT1H-int LTR MaLR -35 1336 1249 431 35 0 0 chr10 25317976 25318033 -120271255 - L1PA8 LINE L1 -505 5667 5611 * 3692 69 9 9 chr10 25317991 25318524 -120270764 + L1PA8 LINE L1 5639 6171 -1 180 212 141 35 chr10 25319756 25319841 -120269447 + L3 LINE CR1 1483 1576 -1 1559 180 64 15 chr10 25319917 25320244 -120269044 + MER2 DNA MER2_type 1 343 -1 247 309 0 0 chr10 25320415 25320483 -120268805 - L2 LINE L2 -1 3271 3204 343 280 64 0 chr10 25320492 25320617 -120268671 + Charlie1 DNA MER1_type 1 133 -2628 380 212 48 42 chr10 25320626 25320681 -120268607 + Charlie1 DNA MER1_type 2445 2498 -263 2424 74 0 0 chr10 25320681 25320978 -120268310 + AluY SINE Alu 1 297 -14 380 212 48 42 chr10 25320978 25321087 -120268201 + Charlie1 DNA MER1_type 2498 2610 -151 1113 159 82 4 chr10 25321088 25321189 -120268099 - L1MA8 LINE L1 -21 6270 6178 315 71 0 0 chr10 25321189 25321231 -120268057 + (TG)n Simple_repeat Simple_repeat 1 42 0 1113 159 82 4 chr10 25321231 25321386 -120267902 - L1MA8 LINE L1 -113 6178 5994 558 187 13 13 chr10 25321476 25321626 -120267662 - Charlie1 DNA MER1_type -2 2759 2610 232 297 79 20 chr10 25321734 25321835 -120267453 + MLT2E LTR ERVL 35 141 -487 1234 194 72 31 chr10 25322787 25323256 -120266032 - MER39 LTR ERV1 -3 704 5 259 360 65 0 chr10 25323442 25323595 -120265693 + MIR SINE MIR 85 247 -15 341 300 0 36 chr10 25324456 25324566 -120264722 - MIR3 SINE MIR -3 205 100 240 209 12 81 chr10 25326409 25326495 -120262793 - 7SK RNA RNA -69 124 45 2421 93 0 0 chr10 25326615 25326917 -120262371 - AluSx SINE Alu -10 302 1 2095 120 0 74 chr10 25327139 25327465 -120261823 - AluSx SINE Alu -10 302 1 231 316 168 11 chr10 25328703 25328798 -120260490 - L2 LINE L2 -20 3252 3143 341 22 22 0 chr10 25329036 25329082 -120260206 + (TG)n Simple_repeat Simple_repeat 2 48 0 250 279 107 21 chr10 25329421 25329582 -120259706 + MIR SINE MIR 10 183 -65 436 327 67 7 chr10 25329988 25330138 -120259150 + L2 LINE L2 3111 3269 -3 30 0 0 0 chr10 25330289 25330319 -120258969 + AT_rich Low_complexity Low_complexity 1 30 0 1625 160 4 26 chr10 25333385 25333654 -120255634 + AluJo SINE Alu 25 287 -25 2655 99 5 5 chr10 25333778 25334152 -120255136 + THE1C LTR MaLR 2 375 0 243 0 0 0 chr10 25334653 25334680 -120254608 + (CA)n Simple_repeat Simple_repeat 2 28 0 200 289 19 0 chr10 25334852 25334904 -120254384 + L2 LINE L2 3218 3270 -2 254 401 46 0 chr10 25334913 25335065 -120254223 - L2 LINE L2 -34 3279 3121 324 227 52 84 chr10 25335072 25335226 -120254062 - MIR SINE MIR -10 252 104 4884 122 5 13 chr10 25336242 25337069 -120252219 - L1PB2 LINE L1 -3 6148 5329 22 0 0 0 chr10 25337426 25337448 -120251840 + AT_rich Low_complexity Low_complexity 1 22 0 207 0 0 0 chr10 25337547 25337570 -120251718 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 2167 106 3 0 chr10 25337576 25337860 -120251428 - AluSg SINE Alu -25 285 1 532 286 78 19 chr10 25338660 25338866 -120250422 + MIR SINE MIR 21 238 -24 296 235 15 15 chr10 25339082 25339150 -120250138 + MIR SINE MIR 13 80 -182 441 0 0 0 chr10 25341742 25341791 -120247497 + (TAGA)n Simple_repeat Simple_repeat 1 49 0 21 36 0 0 chr10 25342714 25342742 -120246546 + AT_rich Low_complexity Low_complexity 1 28 0 468 320 69 10 chr10 25343111 25343314 -120245974 - MIR SINE MIR 0 262 48 260 311 66 16 chr10 25344566 25344688 -120244600 - MIR SINE MIR -70 192 65 1912 166 0 10 chr10 25344787 25345088 -120244200 + AluJo SINE Alu 1 298 -14 1921 188 127 103 chr10 25346512 25347150 -120242138 - MER82 DNA MER2_type 0 653 1 32 43 0 0 chr10 25348534 25348580 -120240708 + AT_rich Low_complexity Low_complexity 1 46 0 247 208 0 0 chr10 25348845 25348898 -120240390 - MLT1I LTR MaLR -28 381 329 2072 150 3 0 chr10 25349057 25349385 -120239903 + AluSx SINE Alu 1 329 0 302 257 33 59 chr10 25349999 25350151 -120239137 + L1M4 LINE L1 1066 1213 -5329 192 158 0 0 chr10 25350169 25350207 -120239081 + (TATAG)n Simple_repeat Simple_repeat 2 39 0 731 281 18 18 chr10 25350207 25350424 -120238864 + MIR SINE MIR 1 217 -45 1968 151 3 28 chr10 25350624 25350943 -120238345 - AluJo SINE Alu -1 311 1 262 216 63 27 chr10 25351185 25351296 -120237992 + L1MEc LINE L1 40 154 -5965 396 277 188 33 chr10 25351620 25352013 -120237275 + L1MEc LINE L1 561 1014 -5105 1006 38 15 8 chr10 25352019 25352180 -120237108 + L1PA4 LINE L1 6020 6155 0 3883 145 29 14 chr10 25352203 25352926 -120236362 + L1MA8 LINE L1 5556 6289 -2 39 0 0 0 chr10 25352980 25353019 -120236269 + AT_rich Low_complexity Low_complexity 1 39 0 648 276 56 14 chr10 25353122 25353336 -120235952 - MER58A DNA MER1_type 0 224 2 285 273 70 38 chr10 25353432 25353618 -120235670 + L1MEc LINE L1 1214 1428 -1062 358 312 65 20 chr10 25353624 25353823 -120235465 + L1ME3A LINE L1 34 241 -6301 249 283 69 14 chr10 25354141 25354286 -120235002 + L1ME3A LINE L1 722 874 -5668 243 0 0 0 chr10 25354421 25354448 -120234840 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 447 288 34 34 chr10 25354456 25354751 -120234537 + L1ME3A LINE L1 1007 1301 -5245 3602 198 26 30 chr10 25354764 25356403 -120232885 + L1MC2 LINE L1 4222 5858 -486 728 264 60 41 chr10 25356402 25356717 -120232571 + L1ME3A LINE L1 4389 4709 -1935 * 1628 260 72 29 chr10 25356813 25356978 -120232310 + L1ME3 LINE L1 5985 6141 -519 1178 206 4 59 chr10 25356978 25357231 -120232057 - MER8 DNA MER2_type 0 239 1 1628 260 72 29 chr10 25357231 25357650 -120231638 + L1ME3 LINE L1 6141 6594 -66 4330 244 77 7 chr10 25357716 25359680 -120229608 - L1ME1 LINE L1 -5 6230 4130 2570 245 60 42 chr10 25359661 25360717 -120228571 - L1ME1 LINE L1 -2303 3912 2838 * 1127 275 17 3 chr10 25360753 25361044 -120228244 - L1ME1 LINE L1 -6066 330 36 448 195 107 33 chr10 25361055 25361270 -120228018 + L1ME3A LINE L1 4815 5045 -1599 503 306 184 10 chr10 25361449 25361645 -120227643 + MIR SINE MIR 9 238 -24 225 224 85 85 chr10 25361856 25362079 -120227209 + L1ME3A LINE L1 6227 6449 -219 3932 178 12 40 chr10 25363715 25363806 -120225482 - L1MB3 LINE L1 -8 6175 6083 1743 166 58 22 chr10 25363806 25364168 -120225120 + THE1C LTR MaLR 1 375 0 3932 178 12 40 chr10 25364168 25364892 -120224396 - L1MB3 LINE L1 -100 6083 5383 1720 178 4 0 chr10 25364908 25365183 -120224105 - AluJb SINE Alu -36 276 1 1451 188 87 7 chr10 25365833 25366120 -120223168 - AluJb SINE Alu -2 310 1 937 252 44 0 chr10 25367329 25367535 -120221753 + MER58A DNA MER1_type 1 215 -9 1998 145 0 13 chr10 25367860 25368164 -120221124 + AluJb SINE Alu 1 300 -12 858 272 85 0 chr10 25368662 25368886 -120220402 + MIR SINE MIR 20 262 0 205 286 60 24 chr10 25369274 25369358 -120219930 + L3b LINE CR1 1294 1380 -203 2161 152 55 31 chr10 25370054 25370469 -120218819 - MSTB LTR MaLR -1 425 1 1955 122 0 73 chr10 25370769 25371096 -120218192 + AluSx SINE Alu 3 305 -7 289 250 25 145 chr10 25372284 25372331 -120216957 - MER5B DNA MER1_type 0 189 138 2113 122 27 0 chr10 25372331 25372627 -120216661 - AluSx SINE Alu -8 304 1 289 250 25 145 chr10 25372627 25372779 -120216509 - MER5B DNA MER1_type -51 138 3 2178 202 7 0 chr10 25372875 25373290 -120215998 + MER47B DNA MER2_type 1 418 0 231 223 8 15 chr10 25373290 25373414 -120215874 + (TA)n Simple_repeat Simple_repeat 1 123 0 319 133 0 50 chr10 25373416 25373476 -120215812 + MLT2B1 LTR ERVL 464 520 0 262 291 176 20 chr10 25374424 25374623 -120214665 - MIR SINE MIR -13 249 20 198 148 16 33 chr10 25375100 25375161 -120214127 + (CA)n Simple_repeat Simple_repeat 1 60 0 1677 245 50 39 chr10 25378553 25379226 -120210062 - HAL1 LINE L1 -770 1737 1057 258 32 0 0 chr10 25379669 25379700 -120209588 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 237 65 0 0 chr10 25379806 25379837 -120209451 + (ATG)n Simple_repeat Simple_repeat 2 32 0 752 305 12 31 chr10 25379839 25379982 -120209306 - MIR SINE MIR -8 254 117 1684 138 202 17 chr10 25379982 25380343 -120208945 - MSTA LTR MaLR 0 428 1 752 305 12 31 chr10 25380343 25380455 -120208833 - MIR SINE MIR -145 117 4 198 143 0 0 chr10 25380790 25380825 -120208463 + (CA)n Simple_repeat Simple_repeat 2 36 0 250 267 62 62 chr10 25380917 25381063 -120208225 + MIR SINE MIR 66 211 -51 2066 135 3 0 chr10 25382032 25382328 -120206960 + AluSx SINE Alu 1 297 -15 2480 76 0 0 chr10 25382334 25382638 -120206650 + AluSg SINE Alu 1 304 -6 933 94 0 0 chr10 25382992 25383120 -120206168 - L1PA7 LINE L1 -1 6153 6026 5347 58 6 0 chr10 25383127 25384311 -120204977 - L1PA7 LINE L1 -236 5918 4730 5522 96 9 0 chr10 25384511 25385615 -120203673 - L1PB2 LINE L1 0 6151 5074 276 325 65 32 chr10 25387199 25387213 -120202075 - L2 LINE L2 -7 3265 3253 207 0 0 0 chr10 25387213 25387236 -120202052 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 276 325 65 32 chr10 25387236 25387344 -120201944 - L2 LINE L2 -19 3253 3139 679 261 37 29 chr10 25387761 25388006 -120201282 - L2 LINE L2 -924 2390 2144 2063 157 30 3 chr10 25388204 25388542 -120200746 - MER7A DNA MER2_type 0 346 2 1743 199 0 0 chr10 25388569 25388871 -120200417 + AluJb SINE Alu 2 303 -9 22 0 0 0 chr10 25389534 25389556 -120199732 + AT_rich Low_complexity Low_complexity 1 22 0 808 188 0 0 chr10 25389787 25389936 -120199352 + FRAM SINE Alu 23 171 -5 553 304 75 25 chr10 25390143 25390581 -120198707 + L1MEd LINE L1 569 1028 -5091 1356 158 165 11 chr10 25390588 25390848 -120198440 + AluJo SINE Alu 1 300 -2 1811 170 21 0 chr10 25390855 25391184 -120198104 - L1MB1 LINE L1 -4 6400 6065 10813 192 44 19 chr10 25391184 25393155 -120196133 - L1MB1 LINE L1 -721 5683 3627 2039 85 48 0 chr10 25393155 25393448 -120195840 - AluYa5 SINE Alu 0 306 1 10813 192 44 19 chr10 25393448 25394070 -120195218 - L1MB1 LINE L1 -2777 3627 3022 1133 219 29 33 chr10 25394096 25394338 -120194950 + AluJo SINE Alu 1 241 -71 579 220 69 17 chr10 25394433 25394606 -120194682 - L1MB1 LINE L1 -3402 2980 2799 * 1844 280 37 13 chr10 25394596 25395597 -120193691 - L1MB1 LINE L1 -4024 2358 1257 518 179 36 18 chr10 25395611 25395723 -120193565 - L1M3d LINE L1 -4722 1169 1056 * 43958 42 1 1 chr10 25395721 25401875 -120187413 - L1PA4 LINE L1 0 6155 1 2214 284 58 40 chr10 25401875 25403386 -120185902 - L1M3d LINE L1 -4819 1072 1 1669 162 0 8 chr10 25403419 25403684 -120185604 - AluJo SINE Alu -10 302 40 434 280 10 31 chr10 25403686 25403879 -120185409 + L1MEd LINE L1 1025 1213 -4906 29 70 0 0 chr10 25405449 25405506 -120183782 + AT_rich Low_complexity Low_complexity 1 57 0 1664 194 0 10 chr10 25405619 25405908 -120183380 - AluJo SINE Alu -22 290 5 193 319 50 34 chr10 25406288 25406407 -120182881 - L2 LINE L2 -557 2757 2637 1367 167 4 4 chr10 25406445 25406672 -120182616 + AluJb SINE Alu 86 312 0 392 267 95 50 chr10 25406828 25407090 -120182198 - L2 LINE L2 -822 2492 2219 204 333 155 14 chr10 25407250 25407547 -120181741 + L3 LINE CR1 1233 1571 -6 2082 117 0 30 chr10 25407645 25407974 -120181314 + AluSx SINE Alu 1 312 0 1692 199 16 0 chr10 25408245 25408582 -120180706 - AluJb SINE Alu 0 342 1 414 0 0 0 chr10 25408703 25408749 -120180539 + (CA)n Simple_repeat Simple_repeat 2 47 0 281 130 65 0 chr10 25408926 25408972 -120180316 - AluJ/FRAM SINE Alu -26 276 228 2333 105 0 0 chr10 25409183 25409487 -120179801 - AluSx SINE Alu -8 304 1 284 289 62 39 chr10 25410168 25410296 -120178992 - MIR3 SINE MIR -68 140 10 2107 150 0 10 chr10 25410446 25410760 -120178528 - AluSx SINE Alu -1 311 1 6276 116 20 5 chr10 25410762 25411727 -120177561 - L1PA11 LINE L1 -8 6166 5198 242 318 204 0 chr10 25412127 25412259 -120177029 + MIR3 SINE MIR 47 205 -3 1520 121 70 0 chr10 25415196 25415411 -120173877 + MER30 DNA MER1_type 1 230 0 6230 89 11 8 chr10 25415813 25416682 -120172606 - L1PA10 LINE L1 0 6168 5297 181 379 0 0 chr10 25416935 25417001 -120172287 + MIR SINE MIR 52 117 -145 24 32 0 0 chr10 25417286 25417317 -120171971 + AT_rich Low_complexity Low_complexity 1 31 0 314 358 94 20 chr10 25417325 25417579 -120171709 - L2 LINE L2 -800 2514 2242 905 273 38 73 chr10 25417595 25417991 -120171297 + L2 LINE L2 2932 3313 0 233 172 86 0 chr10 25417990 25418048 -120171240 - MIR SINE MIR -19 243 181 * 504 308 40 12 chr10 25418064 25418311 -120170977 - L2 LINE L2 -1093 2221 1968 2569 33 3 3 chr10 25418489 25418791 -120170497 - AluY SINE Alu -9 302 1 1880 170 0 0 chr10 25419274 25419562 -120169726 + AluJb SINE Alu 6 293 -19 381 117 0 0 chr10 25421829 25421889 -120167399 + (TA)n Simple_repeat Simple_repeat 2 61 0 7961 35 0 0 chr10 25421889 25423310 -120165978 - L1PA5 LINE L1 -12 6142 4718 2419 72 3 0 chr10 25423310 25423616 -120165672 + L1PA5 LINE L1 4430 4736 -1410 1795 166 0 40 chr10 25423733 25424058 -120165230 - AluJo SINE Alu 0 312 1 248 325 98 44 chr10 25425556 25425944 -120163344 + L2 LINE L2 1496 1904 -1410 264 268 107 13 chr10 25425944 25426469 -120162819 + L1MD3 LINE L1 5589 6092 -74 445 31 16 16 chr10 25426469 25426533 -120162755 + (TG)n Simple_repeat Simple_repeat 1 64 0 264 268 107 13 chr10 25426533 25426583 -120162705 + L1MD3 LINE L1 6092 6136 -30 1659 179 14 21 chr10 25426583 25426740 -120162548 - AluJb SINE Alu -23 289 132 207 0 0 0 chr10 25426740 25426763 -120162525 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2095 118 0 3 chr10 25426763 25427050 -120162238 - AluSq SINE Alu -27 286 1 1659 179 14 21 chr10 25427050 25427181 -120162107 - AluJb SINE Alu -178 134 2 6265 21 0 0 chr10 25427231 25427903 -120161385 - L1PA3 LINE L1 -3 6152 5481 8487 54 0 8 chr10 25427903 25428961 -120160327 - L1P LINE L1 -5090 1056 7 1110 326 106 41 chr10 25429024 25429404 -120159884 + L2 LINE L2 1965 2319 -953 1616 188 10 17 chr10 25429404 25429696 -120159592 + AluJo SINE Alu 3 292 -20 1110 326 106 41 chr10 25429696 25430537 -120158751 + L2 LINE L2 2319 3263 -9 1491 200 46 14 chr10 25430848 25431133 -120158155 + AluJo SINE Alu 1 294 -18 324 0 0 0 chr10 25432303 25432339 -120156949 + (TG)n Simple_repeat Simple_repeat 2 37 0 1019 152 24 30 chr10 25432383 25432548 -120156740 + AluJo SINE Alu 105 268 -44 210 37 0 0 chr10 25432724 25432751 -120156537 + (TTTTTA)n Simple_repeat Simple_repeat 2 28 0 3127 68 5 0 chr10 25432766 25433148 -120156140 - L1PA6 LINE L1 -1 6153 5770 230 0 33 0 chr10 25433148 25433178 -120156110 + (TA)n Simple_repeat Simple_repeat 1 31 0 2403 22 0 7 chr10 25433177 25433440 -120155848 - L1PA5 LINE L1 -3 6151 5884 248 0 0 30 chr10 25434626 25434659 -120154629 + (CAAAA)n Simple_repeat Simple_repeat 4 35 0 296 256 13 0 chr10 25435237 25435315 -120153973 + MER116 DNA Mariner 1 79 -1 856 209 41 0 chr10 25435464 25435636 -120153652 + L1MB7 LINE L1 5987 6165 -19 4415 211 33 16 chr10 25435639 25436374 -120152914 + L1MC/D LINE L1 4157 4924 -1340 2729 118 3 0 chr10 25436374 25436737 -120152551 + THE1B LTR MaLR 1 364 0 4415 211 33 16 chr10 25436737 25437344 -120151944 + L1MC/D LINE L1 4924 5519 -745 642 221 59 45 chr10 25437328 25437550 -120151738 + L1MC1 LINE L1 4664 4888 -1258 * 561 68 14 0 chr10 25437550 25437623 -120151665 + THE1C LTR MaLR 1 74 -301 4685 154 29 18 chr10 25437626 25438423 -120150865 + L1MC1 LINE L1 5528 6333 0 315 0 0 0 chr10 25438637 25438672 -120150616 + (ATG)n Simple_repeat Simple_repeat 3 37 0 452 233 39 39 chr10 25439262 25439391 -120149897 - L2 LINE L2 0 3313 3185 1173 220 86 78 chr10 25439729 25440216 -120149072 + MLT1J LTR MaLR 2 492 -19 210 37 0 0 chr10 25440429 25440456 -120148832 + (TTGG)n Simple_repeat Simple_repeat 2 28 0 5953 102 7 0 chr10 25440459 25441271 -120148017 - L1PA15 LINE L1 -1 6164 5347 205 350 21 10 chr10 25442148 25442245 -120147043 + L3 LINE CR1 349 446 -1131 1979 128 4 0 chr10 25442405 25442709 -120146579 - AluSx SINE Alu 0 305 1 897 188 12 0 chr10 25443445 25443610 -120145678 - AluJb SINE Alu -13 299 133 1671 151 6 111 chr10 25445343 25445675 -120143613 - AluJo SINE Alu -1 301 5 1435 177 157 48 chr10 25446002 25446153 -120143135 + MLT1C LTR MaLR 1 134 -492 2242 71 0 7 chr10 25446153 25446464 -120142824 - AluY SINE Alu 0 309 1 1435 177 157 48 chr10 25446464 25446726 -120142562 + MLT1C LTR MaLR 134 619 -7 901 187 35 6 chr10 25447418 25447589 -120141699 - MER45A DNA AcHobo 0 178 3 795 86 9 0 chr10 25447819 25447924 -120141364 + L1PA4 LINE L1 6042 6147 -8 268 308 13 0 chr10 25448102 25448180 -120141108 - L2 LINE L2 -25 3247 3169 515 317 135 20 chr10 25448237 25448824 -120140464 + L2 LINE L2 2645 3303 -10 338 271 21 21 chr10 25449334 25449430 -120139858 + MER81 DNA DNA 1 96 -18 725 207 1 2 chr10 25449912 25450057 -120139231 - MER58B DNA MER1_type -1 340 197 449 152 0 0 chr10 25450038 25450104 -120139184 + MER58B DNA MER1_type 264 329 -12 * 537 165 0 0 chr10 25450115 25450194 -120139094 - MER58A DNA MER1_type -28 79 1 2071 79 4 32 chr10 25450614 25450893 -120138395 - AluSp SINE Alu -20 293 23 1807 145 34 24 chr10 25450936 25451232 -120138056 + AluJb SINE Alu 1 299 -13 942 143 30 6 chr10 25451575 25451743 -120137545 + L1PA15 LINE L1 5994 6165 0 3153 115 31 4 chr10 25455579 25456032 -120133256 - L1PA16 LINE L1 -3 6163 5699 336 381 69 6 chr10 25456192 25456352 -120132936 - MIR3 SINE MIR -25 183 14 21 36 0 0 chr10 25456380 25456408 -120132880 + AT_rich Low_complexity Low_complexity 1 28 0 210 122 61 20 chr10 25456459 25456508 -120132780 + (TATAA)n Simple_repeat Simple_repeat 2 52 0 291 28 0 0 chr10 25456705 25456741 -120132547 + (TG)n Simple_repeat Simple_repeat 1 36 0 543 300 95 24 chr10 25456777 25457176 -120132112 - L1ME3A LINE L1 -206 6196 5755 772 241 35 11 chr10 25457176 25457350 -120131938 + MER5B DNA MER1_type 1 178 0 543 300 95 24 chr10 25457350 25457431 -120131857 - L1ME3A LINE L1 -647 5755 5681 496 324 61 39 chr10 25457539 25457869 -120131419 - L1ME3A LINE L1 -904 5478 5142 23 54 0 0 chr10 25457921 25457958 -120131330 + AT_rich Low_complexity Low_complexity 1 37 0 696 286 78 20 chr10 25457958 25458510 -120130778 - L1ME3A LINE L1 -1890 4488 3839 2209 116 7 0 chr10 25458570 25458862 -120130426 + AluSg SINE Alu 1 294 -16 378 0 0 0 chr10 25458901 25458943 -120130345 + (TG)n Simple_repeat Simple_repeat 1 42 0 324 313 86 25 chr10 25458946 25459144 -120130144 - L1ME3A LINE L1 -2643 3739 3530 410 312 28 28 chr10 25459382 25459629 -120129659 - L1ME3A LINE L1 -4749 1635 1389 474 304 108 27 chr10 25459648 25460287 -120129001 - L1ME3A LINE L1 -4910 1462 772 287 289 66 79 chr10 25460422 25460650 -120128638 - L1ME3A LINE L1 -5864 508 284 586 143 0 0 chr10 25463760 25463844 -120125444 - FRAM SINE Alu -26 150 67 1059 273 78 18 chr10 25465499 25465894 -120123394 - MLT1J2 LTR MaLR -31 419 1 2058 151 3 0 chr10 25466869 25467167 -120122121 + AluSx SINE Alu 1 299 -13 1899 166 0 10 chr10 25468159 25468455 -120120833 - AluJo SINE Alu -19 293 1 314 282 0 0 chr10 25468654 25468725 -120120563 + MIR SINE MIR 84 154 -108 369 285 127 36 chr10 25470423 25470676 -120118612 + MARNA DNA Mariner 269 544 -42 27 29 0 0 chr10 25471540 25471574 -120117714 + AT_rich Low_complexity Low_complexity 1 34 0 1595 191 27 3 chr10 25471726 25472025 -120117263 - AluJo SINE Alu -6 306 1 341 381 62 14 chr10 25472072 25472361 -120116927 - L1ME4a LINE L1 -236 5885 5583 398 308 65 32 chr10 25472886 25473119 -120116169 - L1ME4a LINE L1 -1219 4927 4681 507 339 18 41 chr10 25473133 25473320 -120115968 + MIR SINE MIR 15 198 -64 2673 179 89 54 chr10 25473320 25473656 -120115632 - MER44D DNA MER2_type -1882 605 357 2036 117 10 3 chr10 25473656 25473956 -120115332 + AluY SINE Alu 1 302 -9 2673 179 89 54 chr10 25473956 25474327 -120114961 - MER44D DNA MER2_type -2130 357 1 507 339 18 41 chr10 25474327 25474360 -120114928 + MIR SINE MIR 198 230 -32 317 291 211 36 chr10 25474527 25474774 -120114514 + L1MDa LINE L1 40 329 -6211 245 225 0 108 chr10 25475256 25475367 -120113921 + L1MDa LINE L1 909 1007 -5536 492 77 0 0 chr10 25475381 25475446 -120113842 + MLT1A1 LTR MaLR 247 311 -54 476 126 6 6 chr10 25475488 25475582 -120113706 + MLT1A1 LTR MaLR 296 365 0 1349 129 26 33 chr10 25475582 25475854 -120113434 - Charlie5 DNA MER1_type -110 2502 2233 765 133 0 16 chr10 25476064 25476192 -120113096 + L1PB4 LINE L1 6031 6156 0 2241 96 14 7 chr10 25476845 25477138 -120112150 - AluSx SINE Alu -17 295 1 1897 161 45 34 chr10 25479084 25479629 -120109659 - MLT2A2 LTR ERVL -1 553 2 1315 167 14 0 chr10 25480063 25480285 -120109003 + AluJb SINE Alu 85 309 -3 225 0 0 0 chr10 25480582 25480607 -120108681 + (A)n Simple_repeat Simple_repeat 1 25 0 189 149 0 164 chr10 25480612 25480679 -120108609 - MER5A DNA MER1_type -75 114 59 2230 113 33 0 chr10 25481136 25481438 -120107850 + AluSx SINE Alu 1 312 0 2526 140 16 21 chr10 25481962 25482390 -120106898 + MSTB LTR MaLR 1 426 0 1989 140 3 16 chr10 25482751 25483059 -120106229 - AluSx SINE Alu -8 304 1 29 47 0 0 chr10 25483151 25483194 -120106094 + AT_rich Low_complexity Low_complexity 1 43 0 1252 145 69 28 chr10 25483194 25483483 -120105805 + L1MA4 LINE L1 6000 6300 0 2145 130 10 0 chr10 25483583 25483890 -120105398 - AluSq SINE Alu -3 310 1 205 270 96 35 chr10 25484849 25484964 -120104324 - MIR SINE MIR -56 206 85 642 254 62 31 chr10 25485327 25485520 -120103768 - MIR3 SINE MIR -7 201 3 183 129 0 0 chr10 25485624 25485655 -120103633 + (TCCC)n Simple_repeat Simple_repeat 4 34 0 1821 134 3 59 chr10 25487420 25487534 -120101754 + AluJo SINE Alu 14 133 -179 2722 10 0 0 chr10 25487534 25487832 -120101456 - AluYa5 SINE Alu -13 298 1 1821 134 3 59 chr10 25487832 25488022 -120101266 + AluJo SINE Alu 133 301 -11 227 217 101 0 chr10 25488026 25488095 -120101193 + MIR SINE MIR 139 214 -48 315 206 0 0 chr10 25488098 25488161 -120101127 + L1MB3 LINE L1 5906 5968 -203 1295 134 0 6 chr10 25488168 25488347 -120100941 + AluSx SINE Alu 1 178 -134 844 120 0 0 chr10 25488402 25488519 -120100769 + AluSx SINE Alu 181 297 -13 1011 172 14 9 chr10 25488520 25488735 -120100553 + L1MB3 LINE L1 5960 6175 -8 559 293 0 58 chr10 25488925 25489099 -120100189 - MIR3 SINE MIR -22 186 23 2076 127 3 7 chr10 25489114 25489413 -120099875 + AluSx SINE Alu 1 298 -14 403 208 13 67 chr10 25489542 25489594 -120099694 - L1MA10 LINE L1 0 6334 6283 1130 272 59 2 chr10 25489594 25490032 -120099256 - L1ME2 LINE L1 -34 6130 5668 1941 223 58 23 chr10 25490038 25490554 -120098734 + MER74A LTR ERVL 1 534 -24 1380 229 47 3 chr10 25490582 25491175 -120098113 - L1ME2 LINE L1 -507 5659 5039 653 243 76 5 chr10 25491186 25491396 -120097892 + L1ME LINE L1 5330 5554 -612 507 153 126 0 chr10 25492927 25493038 -120096250 + L1ME LINE L1 5542 5666 -500 2167 88 0 14 chr10 25493073 25493369 -120095919 + AluY SINE Alu 1 292 -19 1759 209 50 53 chr10 25493428 25494090 -120095198 - L1ME2 LINE L1 -1131 5015 4356 1835 215 80 48 chr10 25496177 25496702 -120092586 - MLT1F LTR MaLR 0 542 1 374 327 18 18 chr10 25496807 25496972 -120092316 + MIR3 SINE MIR 31 195 -13 663 164 0 49 chr10 25497454 25497576 -120091712 + FLAM_A SINE Alu 5 120 -13 25 31 0 0 chr10 25497576 25497608 -120091680 + AT_rich Low_complexity Low_complexity 1 32 0 718 299 85 15 chr10 25497789 25498141 -120091147 + L2 LINE L2 2899 3313 0 1024 174 58 47 chr10 25499918 25500029 -120089259 + L1MA4 LINE L1 6022 6130 -170 1725 153 49 17 chr10 25500029 25500316 -120088972 + AluSx SINE Alu 1 296 -16 1024 174 58 47 chr10 25500316 25500479 -120088809 + L1MA4 LINE L1 6130 6299 -1 354 45 0 0 chr10 25500846 25500890 -120088398 + (TG)n Simple_repeat Simple_repeat 2 45 0 1296 185 182 3 chr10 25501318 25501631 -120087657 - MSTD LTR MaLR 0 396 28 358 274 154 10 chr10 25501787 25501988 -120087300 - MIR SINE MIR 0 262 33 206 284 59 39 chr10 25502839 25502941 -120086347 + L2 LINE L2 2793 2896 -418 256 261 270 0 chr10 25502997 25503108 -120086180 + L2 LINE L2 3105 3245 -68 1818 105 67 8 chr10 25505096 25505414 -120083874 + AluSp SINE Alu 1 334 0 605 318 14 14 chr10 25505464 25505675 -120083613 - MIR SINE MIR -15 247 37 867 313 19 0 chr10 25505985 25506241 -120083047 + MIR SINE MIR 2 262 0 3467 114 4 52 chr10 25506549 25507103 -120082185 + MER1A DNA MER1_type 1 527 0 184 286 0 0 chr10 25507298 25507340 -120081948 + MIR SINE MIR 205 246 -16 792 224 33 17 chr10 25508056 25508264 -120081024 + MLT1C LTR MaLR 272 464 -3 2279 87 2 107 chr10 25508298 25508426 -120080862 - L1PB1 LINE L1 0 6151 6011 201 39 0 0 chr10 25508426 25508452 -120080836 + (TTG)n Simple_repeat Simple_repeat 1 26 0 1956 126 3 18 chr10 25508452 25508738 -120080550 - AluSx SINE Alu -30 282 1 2279 87 2 107 chr10 25508738 25509009 -120080279 - L1PB1 LINE L1 -138 6013 5793 222 118 0 0 chr10 25509009 25509043 -120080245 + (TG)n Simple_repeat Simple_repeat 2 35 0 644 130 46 0 chr10 25509048 25509156 -120080132 - L1PB1 LINE L1 -251 5900 5788 8690 159 56 44 chr10 25509156 25510830 -120078458 - pTR5 LTR ERV1 -3 2435 743 360 0 0 0 chr10 25510835 25510875 -120078413 + (TA)n Simple_repeat Simple_repeat 2 41 0 1269 140 26 50 chr10 25510907 25511166 -120078122 - L1MC2 LINE L1 -328 5793 5583 223 304 14 0 chr10 25511888 25511957 -120077331 - MIR SINE MIR -72 190 121 903 212 113 92 chr10 25512551 25512797 -120076491 - MER34 LTR ERV1 0 542 303 2284 118 98 28 chr10 25512797 25513156 -120076132 + MSTA LTR MaLR 1 392 -36 1977 140 7 3 chr10 25513156 25513464 -120075824 - AluSx SINE Alu -3 309 1 2284 118 98 28 chr10 25513464 25513504 -120075784 + MSTA LTR MaLR 392 428 0 903 212 113 92 chr10 25513504 25513798 -120075490 - MER34 LTR ERV1 -239 303 1 1518 124 0 0 chr10 25513854 25514071 -120075217 - AluSg/x SINE Alu -3 309 93 767 314 125 39 chr10 25514619 25515512 -120073776 - L2 LINE L2 0 3272 2301 1840 126 0 21 chr10 25515731 25516016 -120073272 + AluSx SINE Alu 1 279 -33 306 0 0 0 chr10 25516016 25516050 -120073238 + (CA)n Simple_repeat Simple_repeat 1 34 0 2432 188 58 0 chr10 25516454 25516885 -120072403 + MSTB2 LTR MaLR 2 457 0 210 233 14 27 chr10 25516951 25517024 -120072264 + CT-rich Low_complexity Low_complexity 1 72 0 838 309 61 31 chr10 25517191 25517550 -120071738 - L3 LINE CR1 -62 1515 1146 1971 139 0 0 chr10 25519090 25519384 -120069904 + AluSq SINE Alu 1 294 -19 983 163 6 0 chr10 25519387 25519553 -120069735 + AluSg/x SINE Alu 126 292 -18 510 283 134 10 chr10 25519683 25519973 -120069315 - HAL1b LINE L1 -586 762 437 314 280 47 89 chr10 25520023 25520185 -120069103 - HAL1 LINE L1 -1167 1340 1190 1894 146 3 0 chr10 25520185 25520486 -120068802 + AluSx SINE Alu 1 302 -10 314 280 47 89 chr10 25520486 25520559 -120068729 - HAL1 LINE L1 -1317 1190 1115 2166 103 3 0 chr10 25521185 25521485 -120067803 + AluSp SINE Alu 1 301 -12 1860 125 48 0 chr10 25521492 25521781 -120067507 + AluSx SINE Alu 1 303 -9 2415 74 0 3 chr10 25522400 25522711 -120066577 + AluY SINE Alu 1 310 -1 406 262 24 16 chr10 25522711 25522837 -120066451 + MIR SINE MIR 117 243 -19 21 36 0 0 chr10 25523005 25523033 -120066255 + AT_rich Low_complexity Low_complexity 1 28 0 2313 178 29 43 chr10 25523082 25523309 -120065979 - MER39 LTR ERV1 0 707 478 1713 158 0 29 chr10 25523309 25523620 -120065668 + AluJo SINE Alu 1 302 -10 2313 178 29 43 chr10 25523620 25523899 -120065389 - MER39 LTR ERV1 -229 478 5 1551 174 52 0 chr10 25524488 25524775 -120064513 + AluJb SINE Alu 1 302 -10 1153 96 128 41 chr10 25524956 25525175 -120064113 + L1MA1 LINE L1 6065 6302 0 739 249 70 91 chr10 25525294 25525336 -120063952 - MER39 LTR ERV1 -65 584 543 1882 130 35 0 chr10 25525336 25525620 -120063668 - AluSx SINE Alu -18 294 1 739 249 70 91 chr10 25525620 25526054 -120063234 - MER39 LTR ERV1 -106 543 1 1548 199 3 13 chr10 25526354 25526656 -120062632 - AluJo SINE Alu -11 301 3 828 137 0 46 chr10 25526670 25526801 -120062487 - FLAM_C SINE Alu -8 125 1 405 0 0 0 chr10 25527378 25527423 -120061865 + (CA)n Simple_repeat Simple_repeat 2 46 0 2062 127 3 0 chr10 25527482 25527782 -120061506 + AluSx SINE Alu 1 301 -11 983 163 6 0 chr10 25527987 25528153 -120061135 - AluSg/x SINE Alu -18 292 126 1971 139 0 0 chr10 25528156 25528450 -120060838 - AluSq SINE Alu -19 294 1 838 309 61 31 chr10 25529990 25530349 -120058939 + L3 LINE CR1 1146 1515 -62 210 233 14 27 chr10 25530516 25530589 -120058699 + GA-rich Low_complexity Low_complexity 1 72 0 2432 188 58 0 chr10 25530655 25531086 -120058202 - MSTB2 LTR MaLR 0 457 2 306 0 0 0 chr10 25531490 25531524 -120057764 + (TG)n Simple_repeat Simple_repeat 1 34 0 1038 130 35 30 chr10 25531524 25531724 -120057564 - AluSg/x SINE Alu -33 277 77 180 77 0 0 chr10 25531837 25531863 -120057425 + (TTCC)n Simple_repeat Simple_repeat 1 26 0 509 229 0 0 chr10 25531864 25531969 -120057319 - FLAM_A SINE Alu -37 105 1 1292 161 6 114 chr10 25532050 25532391 -120056897 - AluJb SINE Alu -8 304 1 375 257 133 40 chr10 25532584 25532810 -120056478 + LTR33 LTR ERVL 271 517 -4 1665 148 7 24 chr10 25533330 25533620 -120055668 + AluJo SINE Alu 1 285 -27 324 0 0 0 chr10 25533620 25533656 -120055632 + (CA)n Simple_repeat Simple_repeat 2 37 0 326 192 90 0 chr10 25533669 25533747 -120055541 + MER53 DNA DNA 105 189 0 401 217 0 0 chr10 25534414 25534483 -120054805 - L2 LINE L2 0 3313 3245 762 171 0 0 chr10 25536022 25536145 -120053143 + AluJ SINE Alu 11 133 -179 331 314 11 59 chr10 25536226 25536497 -120052791 + MLT1J LTR MaLR 3 260 -251 1393 139 0 0 chr10 25537151 25537360 -120051928 + AluSg/x SINE Alu 92 300 -10 751 185 6 67 chr10 25537385 25537563 -120051725 + AluJ SINE Alu 118 284 -28 771 267 19 77 chr10 25538439 25538486 -120050802 - MLT1A1 LTR MaLR -2 363 315 2121 110 7 0 chr10 25538486 25538794 -120050494 - AluSx SINE Alu -2 310 1 771 267 19 77 chr10 25538794 25539109 -120050179 - MLT1A1 LTR MaLR -50 315 22 1775 121 0 27 chr10 25539909 25540207 -120049081 - AluSx SINE Alu -22 290 1 265 284 8 30 chr10 25540519 25540653 -120048635 + CT-rich Low_complexity Low_complexity 4 134 0 382 214 12 0 chr10 25541070 25541154 -120048134 + L1MB1 LINE L1 6060 6144 -24 225 0 0 0 chr10 25541154 25541179 -120048109 + (TG)n Simple_repeat Simple_repeat 2 26 0 787 223 29 6 chr10 25541365 25541540 -120047748 - MIR SINE MIR -61 201 23 26 64 0 0 chr10 25542407 25542454 -120046834 + AT_rich Low_complexity Low_complexity 1 47 0 1525 274 29 35 chr10 25542578 25543089 -120046199 + MLT1E3 LTR MaLR 26 533 -91 249 258 117 62 chr10 25543704 25543832 -120045456 + L1MC/D LINE L1 5620 5754 -2054 1315 216 3 30 chr10 25544195 25544496 -120044792 + AluJo SINE Alu 1 293 -19 1404 126 0 23 chr10 25545041 25545256 -120044032 - AluSx SINE Alu -102 210 1 277 219 16 16 chr10 25545508 25545572 -120043716 - MER20B DNA MER1_type -696 87 24 188 325 136 26 chr10 25548741 25548895 -120040393 - L2 LINE L2 -993 2321 2151 680 264 72 48 chr10 25549140 25549182 -120040106 + MIR SINE MIR 1 41 -221 809 208 141 14 chr10 25549182 25549466 -120039822 + MER33 DNA MER1_type 5 324 0 680 264 72 48 chr10 25549466 25549673 -120039615 + MIR SINE MIR 41 256 -6 2398 78 0 0 chr10 25549674 25549981 -120039307 - AluSx SINE Alu -1 311 5 856 166 43 11 chr10 25552784 25552971 -120036317 + MER63 DNA MER1_type 12 204 -857 1548 199 3 13 chr10 25553704 25554006 -120035282 - AluJo SINE Alu -11 301 3 828 137 0 46 chr10 25554020 25554151 -120035137 - FLAM_C SINE Alu -8 125 1 966 84 15 0 chr10 25554572 25554703 -120034585 - AluSq/x SINE Alu -180 133 1 354 98 0 0 chr10 25556051 25556102 -120033186 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 1917 121 4 0 chr10 25556107 25556380 -120032908 - AluSg SINE Alu -36 274 1 408 127 25 14 chr10 25556955 25557041 -120032247 + AluS SINE Alu 1 60 -243 431 187 36 92 chr10 25557333 25557584 -120031704 + AluSg1 SINE Alu 5 241 -68 233 384 53 8 chr10 25557608 25557741 -120031547 - L2 LINE L2 -12 3260 3122 1592 176 0 40 chr10 25557949 25558272 -120031016 + AluJo SINE Alu 1 310 -2 670 128 0 20 chr10 25558431 25558533 -120030755 - MSTC LTR MaLR -327 101 2 698 209 0 53 chr10 25559264 25559451 -120029837 + FRAM SINE Alu 1 176 0 372 290 97 39 chr10 25559520 25559727 -120029561 + Charlie8 DNA MER1_type 103 321 -2096 2096 128 3 19 chr10 25560054 25560367 -120028921 + AluSx SINE Alu 1 308 -4 833 195 30 61 chr10 25560376 25560607 -120028681 + AluJb SINE Alu 85 308 -4 312 27 0 0 chr10 25561793 25561830 -120027458 + (TG)n Simple_repeat Simple_repeat 1 37 0 1875 85 25 2 chr10 25563553 25563829 -120025459 - L1PA8 LINE L1 -183 5989 5709 1683 160 16 26 chr10 25565155 25565462 -120023826 + AluJo SINE Alu 1 304 -8 321 330 0 0 chr10 25565468 25565571 -120023717 - MER5A DNA MER1_type -83 106 4 1313 169 8 16 chr10 25567787 25568029 -120021259 + THE1A LTR MaLR 1 240 -115 214 234 0 31 chr10 25568562 25568626 -120020662 + (TATG)n Simple_repeat Simple_repeat 2 63 0 2346 117 0 3 chr10 25568750 25569059 -120020229 + AluSx SINE Alu 2 309 -3 1439 133 0 0 chr10 25569910 25570120 -120019168 - MSTC LTR MaLR -218 210 1 1507 123 8 41 chr10 25570748 25570992 -120018296 + MER46A DNA MER2_type 1 236 0 1617 108 23 0 chr10 25571031 25571245 -120018043 + AluSx SINE Alu 1 219 -93 352 170 0 0 chr10 25571346 25571399 -120017889 - AluS SINE Alu -233 68 16 242 279 15 0 chr10 25571486 25571554 -120017734 - MIR SINE MIR -176 86 18 799 208 0 40 chr10 25571767 25571940 -120017348 + FRAM SINE Alu 8 173 -3 1924 139 17 7 chr10 25572399 25572693 -120016595 - AluSx SINE Alu -15 297 1 540 279 77 37 chr10 25574977 25575274 -120014014 - L2 LINE L2 0 3313 3005 187 244 35 116 chr10 25576930 25577016 -120012272 + L3 LINE CR1 1363 1441 -136 543 260 60 97 chr10 25577025 25577227 -120012061 - L2 LINE L2 0 3313 3105 925 138 26 62 chr10 25577227 25577422 -120011866 + MER53 DNA DNA 2 189 0 543 260 60 97 chr10 25577422 25577709 -120011579 - L2 LINE L2 -208 3105 2739 1219 138 94 0 chr10 25577717 25577888 -120011400 - AluJo SINE Alu -2 310 116 582 28 0 0 chr10 25577888 25577960 -120011328 + (TATTG)n Simple_repeat Simple_repeat 2 73 0 1219 138 94 0 chr10 25577960 25577991 -120011297 - AluJo SINE Alu -196 116 89 444 313 24 14 chr10 25578004 25578212 -120011076 - L2 LINE L2 -601 2713 2504 287 164 91 0 chr10 25578215 25578270 -120011018 + AluJo SINE Alu 90 149 -153 991 127 58 5 chr10 25578547 25578752 -120010536 - AluY SINE Alu -95 216 1 1739 177 10 10 chr10 25578752 25579057 -120010231 - AluJo SINE Alu -6 306 2 1276 164 5 14 chr10 25579752 25579959 -120009329 + AluJo SINE Alu 3 207 -105 672 76 54 0 chr10 25580385 25580477 -120008811 - MER41B LTR ERV1 -4 631 535 1034 129 5 86 chr10 25580479 25580665 -120008623 - AluSg/x SINE Alu 0 312 142 2294 117 0 0 chr10 25580867 25581174 -120008114 - AluY SINE Alu -3 308 2 2033 96 0 74 chr10 25581175 25581498 -120007790 - AluSq SINE Alu -14 299 1 517 195 65 0 chr10 25581946 25582069 -120007219 + MER94 DNA DNA 1 131 -3 22 56 0 0 chr10 25582181 25582217 -120007071 + AT_rich Low_complexity Low_complexity 1 36 0 2451 63 0 7 chr10 25583740 25584041 -120005247 - AluY SINE Alu -12 299 1 1902 133 10 20 chr10 25584363 25584664 -120004624 - AluJo SINE Alu -10 302 5 195 69 0 0 chr10 25585566 25585595 -120003693 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 1962 107 0 49 chr10 25587049 25587376 -120001912 + AluY SINE Alu 1 311 0 423 160 0 0 chr10 25587923 25587998 -120001290 + (TG)n Simple_repeat Simple_repeat 2 76 0 698 202 0 0 chr10 25588309 25588428 -120000860 - FLAM_A SINE Alu -10 123 5 296 240 156 10 chr10 25588523 25588619 -120000669 - MER81 DNA DNA 0 114 5 2051 145 0 0 chr10 25588973 25589269 -120000019 + AluSx SINE Alu 1 296 -16 698 157 0 0 chr10 25590897 25591005 -119998283 + FLAM_C SINE Alu 2 109 -34 3391 65 11 11 chr10 25592106 25592552 -119996736 - MER41A LTR ERV1 -108 446 1 856 156 0 120 chr10 25592997 25593189 -119996099 - AluJb SINE Alu -8 304 136 1737 119 95 41 chr10 25593614 25593909 -119995379 - AluSx SINE Alu -1 311 1 1970 161 0 0 chr10 25594282 25594586 -119994702 - AluJo SINE Alu -8 304 1 186 43 0 0 chr10 25596244 25596267 -119993021 + (CA)n Simple_repeat Simple_repeat 1 23 0 372 22 0 0 chr10 25597308 25597353 -119991935 + (TG)n Simple_repeat Simple_repeat 2 46 0 347 299 82 8 chr10 25598194 25598328 -119990960 + MIR SINE MIR 48 191 -71 1801 127 38 31 chr10 25598490 25598781 -119990507 - AluJb SINE Alu -19 293 1 224 175 0 0 chr10 25598794 25598834 -119990454 - MIR SINE MIR -114 148 109 24 0 0 0 chr10 25599002 25599026 -119990262 + AT_rich Low_complexity Low_complexity 1 24 0 5369 116 51 4 chr10 25599755 25600753 -119988535 - L1PA16 LINE L1 -1 6165 5111 1924 169 19 16 chr10 25600902 25601274 -119988014 - L1PB4 LINE L1 -3 6153 5781 238 271 13 0 chr10 25601278 25601429 -119987859 + (TA)n Simple_repeat Simple_repeat 1 153 0 2059 148 3 0 chr10 25602188 25602499 -119986789 - AluSx SINE Alu 0 312 1 1521 214 3 23 chr10 25603273 25603572 -119985716 - AluJb SINE Alu -19 293 1 245 258 117 62 chr10 25603935 25604063 -119985225 - L1MC/D LINE L1 -2054 5754 5620 1793 167 17 0 chr10 25604371 25604658 -119984630 + AluSx SINE Alu 2 293 -19 183 80 0 0 chr10 25604749 25604774 -119984514 + (TTTTC)n Simple_repeat Simple_repeat 1 25 0 842 64 0 0 chr10 25604797 25604907 -119984381 - L1PA13 LINE L1 -3 6160 6051 813 121 0 57 chr10 25604924 25605064 -119984224 - FLAM_C SINE Alu -11 132 1 2304 84 0 17 chr10 25605149 25605447 -119983841 + AluY SINE Alu 1 293 -18 2587 68 3 0 chr10 25606023 25606332 -119982956 + AluSq SINE Alu 1 310 -3 372 96 5 35 chr10 25608074 25608140 -119981148 - Alu SINE Alu -9 293 240 24 32 0 0 chr10 25608545 25608576 -119980712 + AT_rich Low_complexity Low_complexity 1 31 0 1015 179 0 22 chr10 25609076 25609260 -119980028 + AluJb SINE Alu 133 312 0 340 254 40 48 chr10 25609599 25609725 -119979563 - MIR3 SINE MIR -52 156 32 2264 107 0 3 chr10 25610168 25610466 -119978822 - AluSx SINE Alu -15 297 1 207 0 0 0 chr10 25611358 25611381 -119977907 + (A)n Simple_repeat Simple_repeat 1 23 0 254 338 106 7 chr10 25612910 25613061 -119976227 - MIR3 SINE MIR -3 205 40 944 201 0 0 chr10 25613343 25613492 -119975796 + AluJb SINE Alu 134 282 -30 224 211 0 0 chr10 25613604 25613656 -119975632 + (CA)n Simple_repeat Simple_repeat 1 52 0 2693 36 0 3 chr10 25613895 25614204 -119975084 - AluY SINE Alu -3 308 1 1405 224 0 14 chr10 25614651 25614937 -119974351 + AluJo SINE Alu 12 293 -19 1684 170 31 14 chr10 25615778 25616072 -119973216 + AluJo SINE Alu 1 299 -13 2080 137 7 0 chr10 25616526 25616825 -119972463 + AluSx SINE Alu 1 301 -11 2367 83 7 0 chr10 25617656 25617956 -119971332 + AluY SINE Alu 1 302 -9 1262 168 9 23 chr10 25618061 25618281 -119971007 + AluSg/x SINE Alu 89 305 -7 2245 100 0 7 chr10 25619169 25619469 -119969819 - AluSx SINE Alu -14 298 1 201 182 0 0 chr10 25619794 25619827 -119969461 + A-rich Low_complexity Low_complexity 1 33 0 687 112 0 0 chr10 25620082 25620189 -119969099 + (TC)n Simple_repeat Simple_repeat 2 108 0 1520 154 3 68 chr10 25620190 25620483 -119968805 - AluJo SINE Alu -38 274 1 216 353 60 17 chr10 25621004 25621120 -119968168 - L2 LINE L2 -32 3281 3161 2366 104 0 0 chr10 25621420 25621718 -119967570 - AluSx SINE Alu -14 298 1 252 231 0 0 chr10 25621800 25621852 -119967436 + LTR30 LTR ERV1 1 52 -670 1001 191 40 56 chr10 25621852 25622156 -119967132 + LTR12 LTR ERV1 53 2032 -406 364 149 15 0 chr10 25622156 25622223 -119967065 + LTR30 LTR ERV1 551 618 -104 590 129 58 79 chr10 25622223 25622362 -119966926 + LTR12 LTR ERV1 352 487 -227 717 171 0 16 chr10 25622837 25622960 -119966328 - FLAM_C SINE Alu -21 122 2 7490 21 0 0 chr10 25623714 25624560 -119964728 + L1PA2 LINE L1 5297 6142 -13 1651 183 3 7 chr10 25624590 25624885 -119964403 + AluJo SINE Alu 1 294 -18 1196 201 3 81 chr10 25625415 25625524 -119963764 + AluJo SINE Alu 29 145 -167 2147 111 3 3 chr10 25625524 25625813 -119963475 + AluSx SINE Alu 1 289 -23 1196 201 3 81 chr10 25625813 25626011 -119963277 + AluJo SINE Alu 145 312 0 372 290 97 39 chr10 25626080 25626287 -119963001 + Charlie8 DNA MER1_type 103 321 -2096 249 301 68 110 chr10 25626344 25626563 -119962725 + MIR SINE MIR 34 243 -19 1560 191 7 7 chr10 25626881 25627169 -119962119 + AluJo SINE Alu 6 293 -19 183 80 0 0 chr10 25627234 25627259 -119962029 + (TTCA)n Simple_repeat Simple_repeat 2 26 0 230 358 0 18 chr10 25627283 25627392 -119961896 - L2 LINE L2 -43 3229 3123 832 107 0 107 chr10 25627440 25627589 -119961699 + FLAM_C SINE Alu 1 133 0 444 147 0 0 chr10 25628225 25628300 -119960988 + (TG)n Simple_repeat Simple_repeat 2 76 0 555 129 73 8 chr10 25628460 25628584 -119960704 + L1MC3 LINE L1 5267 5398 -2387 * 5392 188 59 75 chr10 25628574 25630510 -119958778 + L1PA16 LINE L1 4212 6177 11 2135 137 0 10 chr10 25630510 25630823 -119958465 + AluSg SINE Alu 1 310 0 5392 188 59 75 chr10 25630823 25631024 -119958264 + L1PA16 LINE L1 6177 6380 214 1909 162 7 7 chr10 25631024 25631332 -119957956 - AluSx SINE Alu -4 308 1 5392 188 59 75 chr10 25631332 25631585 -119957703 + L1PA16 LINE L1 6380 6636 470 2397 99 3 0 chr10 25631585 25631897 -119957391 + AluSp SINE Alu 1 313 0 5392 188 59 75 chr10 25631897 25632511 -119956777 + L1PA16 LINE L1 6636 7258 1092 760 167 17 0 chr10 25632511 25632631 -119956657 - FLAM_C SINE Alu -20 123 2 5392 188 59 75 chr10 25632631 25632645 -119956643 + L1PA16 LINE L1 7258 5936 -230 2299 88 10 0 chr10 25632645 25632939 -119956349 - AluY SINE Alu -14 297 1 5392 188 59 75 chr10 25632939 25633167 -119956121 + L1PA16 LINE L1 5935 6165 -1 1044 194 4 66 chr10 25633176 25633418 -119955870 + L1MC3 LINE L1 6201 6427 -1358 1000 169 39 10 chr10 25633431 25633638 -119955650 + L1MC3 LINE L1 7570 7782 -3 2423 82 3 0 chr10 25633884 25634188 -119955100 - AluY SINE Alu -6 305 1 2165 122 0 3 chr10 25634533 25634829 -119954459 + AluSq SINE Alu 1 295 -18 1958 118 0 83 chr10 25636319 25636657 -119952631 - AluSx SINE Alu -2 310 1 2378 69 16 0 chr10 25637198 25637504 -119951784 + AluY SINE Alu 1 311 0 321 330 0 0 chr10 25639277 25639380 -119949908 + MER5A DNA MER1_type 4 106 -83 1730 159 13 26 chr10 25639386 25639694 -119949594 - AluJo SINE Alu -8 304 1 1864 132 34 20 chr10 25640863 25641158 -119948130 - AluSq SINE Alu -14 299 1 1940 148 0 7 chr10 25641785 25642076 -119947212 + AluJb SINE Alu 6 294 -18 192 337 27 60 chr10 25642571 25642755 -119946533 + MIR3 SINE MIR 16 193 -15 4048 196 42 50 chr10 25643426 25643979 -119945309 - L1MD2 LINE L1 -197 6145 5589 2311 114 0 0 chr10 25643979 25644286 -119945002 - AluSg SINE Alu -3 307 1 4048 196 42 50 chr10 25644286 25644317 -119944971 - L1MD2 LINE L1 -753 5589 5559 1725 162 7 16 chr10 25644317 25644620 -119944668 + AluJb SINE Alu 5 304 -8 4048 196 42 50 chr10 25644620 25645034 -119944254 - L1MD2 LINE L1 -783 5559 5153 2205 116 0 0 chr10 25645034 25645326 -119943962 + AluSq SINE Alu 1 292 -21 4048 196 42 50 chr10 25645326 25645621 -119943667 - L1MD2 LINE L1 -1189 5153 4857 706 99 40 0 chr10 25645621 25645722 -119943566 - AluSq/x SINE Alu -205 107 3 534 161 21 0 chr10 25645736 25645829 -119943459 + L1M4 LINE L1 5189 5283 -863 3561 230 67 29 chr10 25645832 25646034 -119943254 - L1MD2 LINE L1 -1280 4849 4656 2516 70 0 10 chr10 25646034 25646348 -119942940 - AluY SINE Alu 0 311 1 3561 230 67 29 chr10 25646348 25647243 -119942045 - L1MD2 LINE L1 -1473 4656 3711 479 281 87 32 chr10 25647237 25647368 -119941920 - L1MD2 LINE L1 -853 1637 1515 * 180 0 0 0 chr10 25647368 25647388 -119941900 + (TA)n Simple_repeat Simple_repeat 2 21 0 479 281 87 32 chr10 25647388 25647573 -119941715 - L1MD2 LINE L1 -975 1515 1342 348 24 0 0 chr10 25647573 25647614 -119941674 + (TG)n Simple_repeat Simple_repeat 2 42 0 479 281 87 32 chr10 25647614 25647874 -119941414 - L1MD2 LINE L1 -1148 1342 984 811 227 91 12 chr10 25648045 25648287 -119941001 + MLT1I LTR MaLR 149 409 0 26 30 0 0 chr10 25648695 25648728 -119940560 + AT_rich Low_complexity Low_complexity 1 33 0 200 302 0 0 chr10 25649374 25649437 -119939851 - MIR SINE MIR -13 249 187 2528 152 25 23 chr10 25649452 25649501 -119939787 + Tigger2a DNA MER2_type 1 48 -2660 3375 202 79 4 chr10 25649501 25650184 -119939104 + MER50 LTR ERV1 1 734 0 2528 152 25 23 chr10 25650184 25650567 -119938721 + Tigger2a DNA MER2_type 48 434 0 190 216 307 0 chr10 25650568 25650656 -119938632 - MIR SINE MIR -90 172 58 224 309 0 15 chr10 25651013 25651081 -119938207 + MIR SINE MIR 4 70 -192 186 300 20 0 chr10 25651092 25651142 -119938146 + MIR SINE MIR 211 261 -1 2021 104 82 4 chr10 25651185 25651464 -119937824 + AluSg SINE Alu 1 301 -9 1097 246 104 26 chr10 25651536 25652176 -119937112 + L2 LINE L2 2527 3231 -82 2083 103 0 0 chr10 25652326 25652599 -119936689 - AluSx SINE Alu -39 273 1 1306 178 38 48 chr10 25652680 25652972 -119936316 + AluJo SINE Alu 1 289 -23 725 181 116 0 chr10 25653605 25653760 -119935528 + MER5A DNA MER1_type 17 189 0 1787 179 81 27 chr10 25654753 25655122 -119934166 - MLT1B LTR MaLR -1 389 1 21 0 0 0 chr10 25655698 25655719 -119933569 + AT_rich Low_complexity Low_complexity 1 21 0 2293 125 3 0 chr10 25657009 25657320 -119931968 + AluSq SINE Alu 1 312 -1 217 274 0 0 chr10 25658053 25658104 -119931184 + CT-rich Low_complexity Low_complexity 2 52 0 594 75 0 0 chr10 25658122 25658202 -119931086 + (TTCC)n Simple_repeat Simple_repeat 1 80 0 198 71 0 0 chr10 25658814 25658842 -119930446 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 1344 64 0 6 chr10 25659091 25659264 -119930024 - L1PA5 LINE L1 -1 6153 5982 13930 52 6 2 chr10 25659364 25661711 -119927577 - L1PA5 LINE L1 -143 6011 3658 1703 167 7 24 chr10 25661906 25662221 -119927067 + AluJo SINE Alu 1 310 0 205 287 30 20 chr10 25662479 25662580 -119926708 - L3b LINE CR1 -175 1408 1307 204 371 0 0 chr10 25663017 25663087 -119926201 + L3b LINE CR1 1296 1365 -218 525 248 8 0 chr10 25663833 25663950 -119925338 - MER96B DNA MER1_type? -2 415 298 2015 82 4 11 chr10 25663953 25664222 -119925066 + AluY SINE Alu 5 271 -40 313 139 7 7 chr10 25664375 25664463 -119924825 - L1ME LINE L1 -366 5785 5695 204 289 122 0 chr10 25664465 25664555 -119924733 - MIR SINE MIR -92 116 16 201 133 0 0 chr10 25665675 25665705 -119923583 + (TG)n Simple_repeat Simple_repeat 2 31 0 2304 289 137 25 chr10 25666404 25667275 -119922013 + L2 LINE L2 1715 2487 -826 2086 102 51 0 chr10 25667275 25667550 -119921738 - AluSx SINE Alu -23 289 1 2304 289 137 25 chr10 25667550 25668111 -119921177 + L2 LINE L2 2487 3312 -1 2281 122 0 0 chr10 25669189 25669493 -119919795 - AluSq SINE Alu -9 304 1 1214 276 18 38 chr10 25670571 25670966 -119918322 - MER115 DNA AcHobo -25 668 282 1481 164 19 58 chr10 25672026 25672338 -119916950 - AluJo SINE Alu -12 300 1 2189 102 26 10 chr10 25672974 25673278 -119916010 + AluSx SINE Alu 2 310 -2 588 220 75 31 chr10 25673556 25673715 -119915573 + MIR SINE MIR 92 257 -5 471 296 11 21 chr10 25673881 25674070 -119915218 - L1ME3A LINE L1 -206 5964 5778 666 290 101 38 chr10 25674207 25675045 -119914243 - L1ME3A LINE L1 -597 5573 4685 243 0 0 0 chr10 25675067 25675094 -119914194 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1925 157 0 3 chr10 25675096 25675383 -119913905 - AluSx SINE Alu -26 286 1 492 328 153 16 chr10 25675450 25675966 -119913322 - L1ME3A LINE L1 -1830 4316 3730 2908 90 6 11 chr10 25675997 25676363 -119912925 - THE1B LTR MaLR 0 364 1 296 68 0 0 chr10 25676981 25677025 -119912263 - AluY SINE Alu 0 302 259 1786 109 0 49 chr10 25677125 25677392 -119911896 - AluY SINE Alu -57 254 1 1864 157 28 0 chr10 25677465 25677627 -119911661 - AluSx SINE Alu -17 295 120 1954 100 0 4 chr10 25677627 25677887 -119911401 - AluSc SINE Alu -4 305 47 1864 157 28 0 chr10 25677887 25678011 -119911277 - AluSx SINE Alu -192 120 1 21 0 0 0 chr10 25678243 25678264 -119911024 + AT_rich Low_complexity Low_complexity 1 21 0 257 290 75 47 chr10 25678591 25678698 -119910590 + L2 LINE L2 3162 3271 -1 2385 88 3 0 chr10 25678771 25679076 -119910212 - AluSc SINE Alu -3 306 1 570 190 17 31 chr10 25679482 25679645 -119909643 + MER69 DNA AcHobo 9 2526 0 471 333 125 27 chr10 25679689 25680137 -119909151 - L1ME4a LINE L1 -223 5898 5407 2020 129 3 10 chr10 25680516 25680810 -119908478 + AluSx SINE Alu 1 292 -20 941 242 62 0 chr10 25681234 25681461 -119907827 + MIR SINE MIR 14 254 -8 989 283 114 37 chr10 25681525 25682235 -119907053 + L2 LINE L2 2522 3313 0 1232 216 42 19 chr10 25682488 25682798 -119906490 + L1ME1 LINE L1 5818 6134 -32 2476 113 21 16 chr10 25682804 25683183 -119906105 - L1PB1 LINE L1 -1 6150 5770 1742 147 3 11 chr10 25683220 25683505 -119905783 - AluSx SINE Alu -29 283 1 2183 117 0 3 chr10 25684314 25684612 -119904676 + AluSx SINE Alu 1 297 -15 442 139 236 0 chr10 25684969 25685041 -119904247 + AluS SINE Alu 2 90 -222 544 218 20 0 chr10 25685042 25685143 -119904145 - AluJo SINE Alu -125 187 85 1251 223 108 47 chr10 25685303 25685644 -119903644 + MER82 DNA MER2_type 1 362 -291 1174 134 5 37 chr10 25685707 25685894 -119903394 - AluJo SINE Alu -36 276 96 614 131 50 30 chr10 25685928 25686027 -119903261 - AluJo SINE Alu -211 101 1 1134 271 11 4 chr10 25686091 25686364 -119902924 + MER82 DNA MER2_type 379 653 0 500 136 0 12 chr10 25686441 25686522 -119902766 - MADE1 DNA Mariner 0 80 1 1418 181 3 59 chr10 25687202 25687354 -119901934 - AluJo SINE Alu -25 287 159 2249 124 0 0 chr10 25687354 25687653 -119901635 - AluSg SINE Alu -11 299 1 1418 181 3 59 chr10 25687653 25687804 -119901484 - AluJo SINE Alu -153 159 1 2865 93 8 16 chr10 25688204 25688582 -119900706 + THE1C LTR MaLR 1 375 0 349 303 30 8 chr10 25688969 25689101 -119900187 + L3 LINE CR1 1248 1382 -195 288 328 146 5 chr10 25689089 25689281 -119900007 + MIR SINE MIR 23 241 -21 * 209 307 45 34 chr10 25689313 25689401 -119899887 - L2 LINE L2 0 3313 3225 1986 119 59 0 chr10 25689600 25689886 -119899402 - AluSx SINE Alu -9 303 1 200 226 12 36 chr10 25689952 25690036 -119899252 + T-rich Low_complexity Low_complexity 2 83 0 305 263 0 0 chr10 25690888 25690968 -119898320 - MER116 DNA Mariner 0 80 1 2401 85 3 0 chr10 25691276 25691581 -119897707 + AluY SINE Alu 1 306 -5 1021 169 39 10 chr10 25691827 25692034 -119897254 - L1MC3 LINE L1 -3 7782 7570 1055 194 4 66 chr10 25692047 25692289 -119896999 - L1MC3 LINE L1 -1358 6427 6201 5444 188 58 76 chr10 25692298 25692526 -119896762 - L1PA16 LINE L1 -1 6165 5935 2304 85 10 0 chr10 25692526 25692820 -119896468 + AluY SINE Alu 1 297 -14 5444 188 58 76 chr10 25692820 25692834 -119896454 - L1PA16 LINE L1 -231 5935 5922 808 167 17 0 chr10 25692834 25692954 -119896334 + FLAM_C SINE Alu 2 123 -20 5444 188 58 76 chr10 25692954 25693569 -119895719 - L1PA16 LINE L1 -244 5922 5298 2417 96 3 0 chr10 25693569 25693881 -119895407 - AluSp SINE Alu 0 313 1 5444 188 58 76 chr10 25693881 25694134 -119895154 - L1PA16 LINE L1 -868 5298 5042 1906 162 7 7 chr10 25694134 25694442 -119894846 + AluSx SINE Alu 1 308 -4 5444 188 58 76 chr10 25694442 25694643 -119894645 - L1PA16 LINE L1 -1124 5042 4839 2165 131 0 10 chr10 25694643 25694956 -119894332 - AluSg SINE Alu 0 310 1 5444 188 58 76 chr10 25694956 25696898 -119892390 - L1PA16 LINE L1 -1327 4839 4212 567 129 73 8 chr10 25696888 25697012 -119892276 - L1MC3 LINE L1 -2387 5398 5267 * 423 160 0 0 chr10 25697172 25697247 -119892041 + (CA)n Simple_repeat Simple_repeat 2 76 0 2171 92 3 7 chr10 25697791 25698099 -119891189 - AluSx SINE Alu 0 307 1 230 339 80 37 chr10 25699417 25699661 -119889627 - L2 LINE L2 -253 3019 2701 31 44 0 0 chr10 25699845 25699890 -119889398 + AT_rich Low_complexity Low_complexity 1 45 0 194 307 119 11 chr10 25699899 25700075 -119889213 - L2 LINE L2 -1365 1949 1755 180 152 0 0 chr10 25700174 25700207 -119889081 + GA-rich Low_complexity Low_complexity 3 35 0 189 0 0 0 chr10 25700270 25700291 -119888997 + (GGA)n Simple_repeat Simple_repeat 1 21 0 2251 95 7 0 chr10 25701356 25701650 -119887638 - AluSx SINE Alu -16 296 1 2145 122 0 3 chr10 25701995 25702291 -119886997 + AluSq SINE Alu 1 295 -18 1962 115 0 83 chr10 25703781 25704119 -119885169 - AluSx SINE Alu -2 310 1 2439 49 16 0 chr10 25704659 25704963 -119884325 + AluY SINE Alu 1 309 -2 432 296 82 13 chr10 25706740 25706849 -119882439 + MER5A DNA MER1_type 4 129 -60 1715 159 13 26 chr10 25706849 25707157 -119882131 - AluJo SINE Alu -8 304 1 432 296 82 13 chr10 25707157 25707206 -119882082 + MER5A DNA MER1_type 129 173 -16 294 203 16 16 chr10 25707902 25707966 -119881322 + MER20B DNA MER1_type 24 87 -696 2139 121 0 34 chr10 25708218 25708540 -119880748 + AluSx SINE Alu 1 311 -1 860 226 196 1 chr10 25708656 25709172 -119880116 + MER20B DNA MER1_type 109 783 0 2179 141 0 0 chr10 25709265 25709577 -119879711 + AluSx SINE Alu 1 312 0 1625 169 50 7 chr10 25710161 25710440 -119878848 - AluJo SINE Alu -12 300 10 1720 133 4 4 chr10 25711317 25711565 -119877723 - AluSx SINE Alu -12 300 53 2113 121 0 3 chr10 25711565 25711862 -119877426 - AluSx SINE Alu -16 296 1 2276 102 0 0 chr10 25712512 25712807 -119876481 + AluSx SINE Alu 1 295 -17 2294 137 63 18 chr10 25712807 25713187 -119876101 - LTR32 LTR ERVL -63 408 12 793 261 176 60 chr10 25713271 25713767 -119875521 - L2 LINE L2 -2 3311 2874 1957 151 0 7 chr10 25713767 25714065 -119875223 - AluJo SINE Alu -16 296 1 793 261 176 60 chr10 25714065 25714462 -119874826 - L2 LINE L2 -439 2874 2311 34 42 0 0 chr10 25715078 25715126 -119874162 + AT_rich Low_complexity Low_complexity 1 48 0 1315 202 109 8 chr10 25715126 25715383 -119873905 - AluJo SINE Alu -19 283 1 297 311 203 12 chr10 25715500 25715825 -119873463 - L2 LINE L2 -338 2976 2590 1444 215 63 6 chr10 25715947 25716416 -119872872 - MER87 LTR ERV1 0 541 21 282 304 146 23 chr10 25716448 25716708 -119872580 - L2 LINE L2 -882 2432 2141 1810 171 3 31 chr10 25718243 25718564 -119870724 + AluJb SINE Alu 1 312 0 2087 131 7 0 chr10 25719590 25719887 -119869401 + AluSx SINE Alu 1 299 -13 348 127 0 0 chr10 25719887 25719942 -119869346 + (GGGA)n Simple_repeat Simple_repeat 1 55 0 282 116 0 0 chr10 25720086 25720129 -119869159 + (CA)n Simple_repeat Simple_repeat 1 43 0 434 261 29 14 chr10 25720147 25720285 -119869003 - MER103 DNA DNA -25 141 2 383 262 104 12 chr10 25720364 25720528 -119868760 + MIR SINE MIR 27 205 -57 636 257 57 11 chr10 25720967 25721142 -119868146 - MIR SINE MIR -7 255 73 1874 152 0 3 chr10 25721464 25721770 -119867518 + AluJb SINE Alu 1 305 0 22 0 0 0 chr10 25723055 25723077 -119866211 + AT_rich Low_complexity Low_complexity 1 22 0 2196 109 3 10 chr10 25723083 25723385 -119865903 + AluSx SINE Alu 1 300 -12 1702 176 7 3 chr10 25723388 25723677 -119865611 + AluJb SINE Alu 5 294 -18 1726 92 26 0 chr10 25724593 25724820 -119864468 - AluSg/x SINE Alu -10 300 68 2303 78 7 10 chr10 25725409 25725715 -119863573 + AluY SINE Alu 1 305 -6 921 176 0 34 chr10 25726349 25726525 -119862763 + AluJb SINE Alu 137 306 -6 491 222 20 0 chr10 25727068 25727167 -119862121 + MER81 DNA DNA 13 113 -1 778 204 0 0 chr10 25728031 25728163 -119861125 - FLAM_A SINE Alu -1 132 1 817 149 25 19 chr10 25728482 25728643 -119860645 - MER119 DNA MER1_type -54 529 368 626 195 0 16 chr10 25728644 25728772 -119860516 + MLT2D LTR ERVL 2 127 -287 821 145 8 0 chr10 25728772 25728889 -119860399 + FLAM_C SINE Alu 3 120 -13 731 126 20 13 chr10 25728893 25729044 -119860244 + (TAGA)n Simple_repeat Simple_repeat 1 152 0 1355 163 8 54 chr10 25729045 25729303 -119859985 + MLT2D LTR ERVL 121 366 -48 1655 195 62 21 chr10 25729382 25729720 -119859568 - MER119 DNA MER1_type -231 352 1 2427 91 7 0 chr10 25729841 25730149 -119859139 + AluSx SINE Alu 1 310 -2 2468 72 0 13 chr10 25731505 25731809 -119857479 + AluY SINE Alu 1 300 -11 2079 152 61 13 chr10 25731819 25731995 -119857293 + L1MB3 LINE L1 5552 5718 -465 1917 135 20 24 chr10 25731995 25732291 -119856997 + AluSx SINE Alu 1 295 -17 2079 152 61 13 chr10 25732291 25732679 -119856609 + L1MB3 LINE L1 5718 6169 -14 1946 135 0 17 chr10 25732683 25732997 -119856291 - AluSx SINE Alu 0 309 1 189 250 12 95 chr10 25733008 25733092 -119856196 - MER5B DNA MER1_type -45 133 57 262 77 0 0 chr10 25733338 25733377 -119855911 + L1MA3 LINE L1 6267 6305 0 1173 194 17 69 chr10 25733672 25733960 -119855328 - AluJo SINE Alu 0 312 40 360 0 0 0 chr10 25734532 25734572 -119854716 + (TG)n Simple_repeat Simple_repeat 2 41 0 1753 148 11 15 chr10 25734742 25735013 -119854275 + AluJo SINE Alu 19 288 -24 2057 131 0 0 chr10 25735024 25735334 -119853954 + AluSx SINE Alu 1 310 0 562 250 83 31 chr10 25738173 25738228 -119851060 - MIR SINE MIR -45 217 166 1913 126 47 0 chr10 25738228 25738506 -119850782 - AluJo SINE Alu -10 302 12 562 250 83 31 chr10 25738506 25738642 -119850646 - MIR SINE MIR -96 166 16 3212 131 10 12 chr10 25738809 25739298 -119849990 - LOR1a LTR ERV1 -7 490 3 296 158 0 73 chr10 25739721 25740032 -119849256 + (TA)n Simple_repeat Simple_repeat 1 288 0 304 311 49 37 chr10 25740340 25740504 -119848784 + MIR SINE MIR 97 262 0 2389 99 0 0 chr10 25740757 25741060 -119848228 + AluSq SINE Alu 1 303 -10 1829 168 7 0 chr10 25741361 25741653 -119847635 - AluJb SINE Alu -18 294 1 1918 163 3 0 chr10 25741681 25741982 -119847306 - AluJo SINE Alu -10 302 1 2194 105 0 3 chr10 25742539 25742834 -119846454 - AluSq SINE Alu -13 300 7 195 292 100 50 chr10 25743241 25743361 -119845927 + L3 LINE CR1 317 442 -1135 2067 117 0 11 chr10 25743773 25744056 -119845232 - AluSx SINE Alu -24 288 9 684 139 28 0 chr10 25744172 25744280 -119845008 - L1PA16 LINE L1 -9 6157 6047 341 297 132 62 chr10 25744490 25744830 -119844458 + L3b LINE CR1 1102 1465 -118 772 199 8 8 chr10 25744998 25745129 -119844159 + FLAM_A SINE Alu 1 131 -2 602 85 11 0 chr10 25745132 25745226 -119844062 + (GGAA)n Simple_repeat Simple_repeat 2 96 0 243 253 162 40 chr10 25745401 25745500 -119843788 + L2 LINE L2 3160 3270 -2 1551 194 95 14 chr10 25745686 25746032 -119843256 + L1MB8 LINE L1 5657 6030 -148 1229 108 0 6 chr10 25746034 25746200 -119843088 - AluSg/x SINE Alu -15 297 133 432 245 38 0 chr10 25746200 25746324 -119842964 + L1MB7 LINE L1 6021 6149 -25 1620 167 14 21 chr10 25746324 25746657 -119842631 - AluJo SINE Alu 0 333 3 2065 102 3 7 chr10 25746706 25746990 -119842298 + AluSq SINE Alu 1 283 -30 2337 202 26 22 chr10 25747515 25748123 -119841165 + L1M3 LINE L1 4848 5457 -723 252 214 0 0 chr10 25748122 25748164 -119841124 - L1M4 LINE L1 -711 5467 5426 * 2261 110 3 3 chr10 25748345 25748655 -119840633 - AluSg SINE Alu 0 310 1 241 302 54 31 chr10 25749723 25749852 -119839436 + MIR SINE MIR 119 250 -12 348 348 81 5 chr10 25750270 25750491 -119838797 - MIR SINE MIR -14 248 11 2246 125 44 36 chr10 25750910 25751271 -119838017 + THE1B LTR MaLR 1 364 0 420 321 79 42 chr10 25752388 25752578 -119836710 + MIR3 SINE MIR 5 201 -7 25 51 0 0 chr10 25753046 25753085 -119836203 + AT_rich Low_complexity Low_complexity 1 39 0 317 336 64 39 chr10 25753151 25753365 -119835923 - L1MC4a LINE L1 -1766 6042 5818 2360 89 7 0 chr10 25753365 25753668 -119835620 - AluSx SINE Alu -7 305 1 317 336 64 39 chr10 25753668 25753736 -119835552 - L1MC4a LINE L1 -1990 5818 5753 269 266 149 39 chr10 25753814 25754183 -119835105 - L1MC4a LINE L1 -725 5441 5296 282 323 52 47 chr10 25754280 25754704 -119834584 - L1MC4a LINE L1 -979 5167 4742 22 70 0 0 chr10 25754885 25754928 -119834360 + AT_rich Low_complexity Low_complexity 1 43 0 2539 114 22 75 chr10 25756509 25756893 -119832395 - L1MB2 LINE L1 0 6171 5813 2229 64 0 30 chr10 25756893 25757189 -119832099 + AluY SINE Alu 1 287 -24 2539 114 22 75 chr10 25757189 25757259 -119832029 - L1MB2 LINE L1 -358 5813 5741 2106 123 7 3 chr10 25757280 25757582 -119831706 - AluSx SINE Alu -9 303 1 21 0 0 0 chr10 25758293 25758314 -119830974 + AT_rich Low_complexity Low_complexity 1 21 0 898 143 7 0 chr10 25758488 25758635 -119830653 - L1MA9 LINE L1 -5 6307 6160 1872 122 68 0 chr10 25758786 25759064 -119830224 + AluSx SINE Alu 1 297 -15 1404 174 80 31 chr10 25759576 25759863 -119829425 + AluJb SINE Alu 1 301 -11 245 239 204 44 chr10 25760115 25760228 -119829060 - MIR SINE MIR -13 249 119 2058 132 3 7 chr10 25761656 25761959 -119827329 - AluSx SINE Alu -10 302 1 195 42 0 0 chr10 25764131 25764155 -119825133 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 3873 154 141 12 chr10 25764949 25765681 -119823607 - LTR1B LTR ERV1 0 826 1 1581 203 56 17 chr10 25765999 25766359 -119822929 - MLT1A2 LTR MaLR 0 374 1 2439 91 0 0 chr10 25766448 25766756 -119822532 - AluSg SINE Alu 0 310 3 208 250 0 0 chr10 25766929 25766981 -119822307 - MIR SINE MIR -93 169 118 1926 156 71 24 chr10 25767220 25767598 -119821690 + MSTD LTR MaLR 1 396 0 314 226 137 24 chr10 25767647 25767771 -119821517 - MIR3 SINE MIR -49 159 22 247 210 14 168 chr10 25769488 25769631 -119819657 + MARNA DNA Mariner 440 560 -26 204 125 0 0 chr10 25769753 25769785 -119819503 + (TTTTC)n Simple_repeat Simple_repeat 3 34 0 2118 143 0 9 chr10 25769787 25770102 -119819186 - AluSx SINE Alu 0 312 1 343 335 71 27 chr10 25770155 25770379 -119818909 - MIR SINE MIR -26 236 3 2168 100 0 4 chr10 25770750 25771030 -119818258 - AluSx SINE Alu -6 306 28 281 253 103 34 chr10 25771693 25771839 -119817449 - L1ME4a LINE L1 -11 6110 5955 1863 167 0 16 chr10 25771879 25772196 -119817092 - AluJb SINE Alu 0 312 1 2413 66 0 25 chr10 25772402 25772721 -119816567 + AluY SINE Alu 1 311 0 272 329 60 7 chr10 25772828 25772977 -119816311 - MIR SINE MIR -8 254 98 574 110 8 31 chr10 25773422 25773668 -119815620 + AluSx SINE Alu 1 310 0 1817 178 0 22 chr10 25774261 25774575 -119814713 - AluJo SINE Alu -5 307 1 2415 90 0 0 chr10 25774684 25774983 -119814305 - AluSq SINE Alu -14 299 1 215 222 0 19 chr10 25775444 25775479 -119813809 + CT-rich Low_complexity Low_complexity 3 38 -17 1521 169 0 55 chr10 25775479 25775805 -119813483 - AluJo SINE Alu 0 312 5 215 222 0 19 chr10 25775805 25775823 -119813465 + CT-rich Low_complexity Low_complexity 38 55 0 183 42 0 0 chr10 25776400 25776424 -119812864 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 2158 136 0 0 chr10 25776866 25777176 -119812112 + AluSx SINE Alu 1 310 -2 204 237 0 51 chr10 25777754 25777813 -119811475 + T-rich Low_complexity Low_complexity 4 59 0 942 145 62 0 chr10 25778422 25778601 -119810687 - MIR SINE MIR -3 259 70 351 0 0 0 chr10 25779883 25779922 -119809366 + (TG)n Simple_repeat Simple_repeat 2 40 0 2619 53 0 0 chr10 25780687 25780989 -119808299 + AluY SINE Alu 1 302 -9 878 172 53 24 chr10 25781301 25781470 -119807818 - AluJb SINE Alu -138 174 1 1690 116 31 41 chr10 25782518 25782696 -119806592 + L1PA16 LINE L1 5867 6042 -124 2120 174 73 16 chr10 25782696 25783132 -119806156 - LOR1b LTR ERV1 0 461 1 1690 116 31 41 chr10 25783132 25783247 -119806041 + L1PA16 LINE L1 6042 6157 -9 1715 173 7 7 chr10 25785371 25785678 -119803610 - AluJo SINE Alu -5 307 1 276 318 117 7 chr10 25786904 25787058 -119802230 - MIR3 SINE MIR -6 202 32 1817 149 22 4 chr10 25787073 25787348 -119801940 + AluJo SINE Alu 1 280 -32 210 37 0 0 chr10 25787348 25787375 -119801913 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 2084 146 0 3 chr10 25790361 25790669 -119798619 + AluSq SINE Alu 1 307 -6 1528 148 0 59 chr10 25790936 25791207 -119798081 + AluSx SINE Alu 1 255 -57 360 0 0 0 chr10 25791207 25791247 -119798041 + (TAAA)n Simple_repeat Simple_repeat 3 42 0 2054 156 24 15 chr10 25791947 25792281 -119797007 + MER1B DNA MER1_type 1 337 0 22 70 0 0 chr10 25793042 25793085 -119796203 + AT_rich Low_complexity Low_complexity 1 43 0 1225 156 14 14 chr10 25793428 25793639 -119795649 - AluJb SINE Alu 0 312 102 1316 188 7 33 chr10 25843644 25843916 -119745372 - AluJo SINE Alu -36 276 12 898 169 0 0 chr10 25844475 25844611 -119744677 + MER2 DNA MER2_type 1 136 -209 532 227 74 51 chr10 25844652 25844868 -119744420 + MER2 DNA MER2_type 125 345 0 2141 111 3 0 chr10 25845097 25845386 -119743902 - AluSx SINE Alu -13 299 10 1705 167 10 7 chr10 25845918 25846211 -119743077 + AluJo SINE Alu 6 299 -13 1553 169 52 14 chr10 25846211 25846331 -119742957 + AluJb SINE Alu 1 115 -197 186 43 0 0 chr10 25846331 25846354 -119742934 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 1553 169 52 14 chr10 25846354 25846523 -119742765 + AluJb SINE Alu 115 301 -11 454 223 127 6 chr10 25846799 25846956 -119742332 - MIR SINE MIR 0 262 87 2563 108 11 6 chr10 25847765 25848127 -119741161 - THE1B LTR MaLR 0 364 1 22 0 0 0 chr10 25848152 25848174 -119741114 + AT_rich Low_complexity Low_complexity 1 22 0 2421 101 0 3 chr10 25849900 25850206 -119739082 + AluSq SINE Alu 1 305 -8 2012 125 0 7 chr10 25850797 25851110 -119738178 + AluSx SINE Alu 3 313 0 300 216 152 117 chr10 25851110 25851281 -119738007 - MER5B DNA MER1_type -1 177 1 2444 85 0 3 chr10 25852596 25852902 -119736386 + AluSq SINE Alu 1 305 -8 379 160 4 4 chr10 25853325 25853400 -119735888 - Alu SINE Alu -246 53 1 643 296 149 13 chr10 25853420 25853941 -119735347 + L2 LINE L2 2716 3312 -1 2294 122 0 0 chr10 25855019 25855323 -119733965 - AluSq SINE Alu -9 304 1 1223 276 18 38 chr10 25856401 25856796 -119732492 - MER115 DNA AcHobo -25 668 282 1494 164 19 58 chr10 25857856 25858168 -119731120 - AluJo SINE Alu -12 300 1 2186 103 26 10 chr10 25858804 25859106 -119730182 + AluSx SINE Alu 2 308 -4 574 208 75 31 chr10 25859380 25859539 -119729749 + MIR SINE MIR 92 257 -5 448 291 16 26 chr10 25859706 25859895 -119729393 - L1ME3A LINE L1 -206 5964 5778 664 288 101 38 chr10 25860032 25860870 -119728418 - L1ME3A LINE L1 -597 5573 4685 243 0 0 0 chr10 25860892 25860919 -119728369 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1951 157 0 3 chr10 25860921 25861208 -119728080 - AluSx SINE Alu -26 286 1 439 328 153 16 chr10 25861275 25861791 -119727497 - L1ME3A LINE L1 -1830 4316 3730 2795 90 6 8 chr10 25861822 25862187 -119727101 - THE1B LTR MaLR 0 364 1 2217 102 0 41 chr10 25862804 25863119 -119726169 - AluY SINE Alu -9 302 1 1880 157 28 0 chr10 25863192 25863354 -119725934 - AluSx SINE Alu -17 295 120 1965 100 0 4 chr10 25863354 25863614 -119725674 - AluSc SINE Alu -4 305 47 1880 157 28 0 chr10 25863614 25863738 -119725550 - AluSx SINE Alu -192 120 1 21 0 0 0 chr10 25863970 25863991 -119725297 + AT_rich Low_complexity Low_complexity 1 21 0 221 290 75 47 chr10 25864318 25864425 -119724863 + L2 LINE L2 3162 3271 -1 2405 88 3 0 chr10 25864498 25864803 -119724485 - AluSc SINE Alu -3 306 1 570 190 17 31 chr10 25865209 25865372 -119723916 + MER69 DNA AcHobo 9 2526 0 471 333 125 27 chr10 25865416 25865864 -119723424 - L1ME4a LINE L1 -223 5898 5407 2020 129 3 10 chr10 25866243 25866537 -119722751 + AluSx SINE Alu 1 292 -20 413 297 95 23 chr10 25867338 25867554 -119721734 + MIR SINE MIR 19 250 -12 415 211 0 11 chr10 25868534 25868624 -119720664 - L2 LINE L2 -1 3312 3224 839 117 102 22 chr10 25868640 25868777 -119720511 + FRAM SINE Alu 21 168 -8 259 324 33 56 chr10 25868777 25868990 -119720298 - L2 LINE L2 -94 3219 3012 1062 236 114 64 chr10 25868990 25869540 -119719748 - HAL1 LINE L1 -898 1609 1032 347 304 63 87 chr10 25869548 25869761 -119719527 - HAL1 LINE L1 -1575 932 728 1553 196 0 11 chr10 25869761 25870036 -119719252 + AluJb SINE Alu 1 272 -40 347 304 63 87 chr10 25870036 25870154 -119719134 - HAL1 LINE L1 -1779 728 609 3849 132 2 8 chr10 25870297 25870827 -119718461 - MER1A DNA MER1_type 0 527 1 334 264 100 36 chr10 25870986 25871126 -119718162 - HAL1 LINE L1 -2358 149 1 650 210 107 24 chr10 25871242 25871432 -119717856 - MLT1G1 LTR MaLR 0 595 332 254 183 0 33 chr10 25871608 25871668 -119717620 - MLT1G1 LTR MaLR -374 175 118 2347 100 20 0 chr10 25872019 25872318 -119716970 - AluSx SINE Alu -7 305 1 1762 186 3 0 chr10 25872365 25872655 -119716633 - AluJo SINE Alu -21 291 1 186 128 0 0 chr10 25873205 25873244 -119716044 + (T)n Simple_repeat Simple_repeat 1 39 0 368 306 52 52 chr10 25873440 25873613 -119715675 - MIR3 SINE MIR -16 192 20 240 35 0 0 chr10 25873898 25873927 -119715361 + (TC)n Simple_repeat Simple_repeat 2 30 0 2258 106 6 6 chr10 25873927 25874239 -119715049 - AluSx SINE Alu 0 312 1 1668 177 7 3 chr10 25874248 25874536 -119714752 - AluJo SINE Alu -23 289 1 266 326 11 11 chr10 25874699 25874794 -119714494 - MIR3 SINE MIR -50 158 64 2250 112 0 0 chr10 25875761 25876056 -119713232 - AluSx SINE Alu -17 295 1 2478 75 0 0 chr10 25876372 25876680 -119712608 + AluY SINE Alu 1 308 -3 255 61 0 0 chr10 25877802 25877835 -119711453 + (A)n Simple_repeat Simple_repeat 1 33 0 1724 215 66 35 chr10 25879375 25879863 -119709425 - MLT1D LTR MaLR -2 503 1 201 213 0 0 chr10 25882539 25882586 -119706702 + (TG)n Simple_repeat Simple_repeat 1 47 0 533 282 82 20 chr10 25882762 25882807 -119706481 - MIR SINE MIR -1 261 220 2044 132 31 0 chr10 25882807 25883095 -119706193 - AluSx SINE Alu -13 299 3 533 282 82 20 chr10 25883095 25883294 -119705994 - MIR SINE MIR -42 220 2 580 254 92 40 chr10 25883562 25883889 -119705399 + L1MC5 LINE L1 7581 7924 -37 2026 119 3 3 chr10 25883893 25884207 -119705081 - AluSx SINE Alu 0 314 1 201 444 41 0 chr10 25884237 25884406 -119704882 + L2 LINE L2 2999 3174 -98 408 276 122 13 chr10 25884982 25885138 -119704150 - MIR SINE MIR -38 224 52 8182 20 0 0 chr10 25885278 25886201 -119703087 - L1PA4 LINE L1 -3 6152 5230 222 37 0 0 chr10 25886294 25886321 -119702967 + (GAAAA)n Simple_repeat Simple_repeat 4 30 0 710 304 9 17 chr10 25886569 25886799 -119702489 - MIR SINE MIR -3 259 32 2047 50 35 15 chr10 25887102 25887397 -119701891 - L1PA5 LINE L1 0 6154 5890 2329 96 0 0 chr10 25887745 25888036 -119701252 + AluSc SINE Alu 1 291 -18 1752 173 6 6 chr10 25888270 25888582 -119700706 - AluJb SINE Alu 0 312 1 23 0 0 0 chr10 25890158 25890181 -119699107 + AT_rich Low_complexity Low_complexity 1 23 0 633 243 101 0 chr10 25890572 25890741 -119698547 - MIR SINE MIR -59 203 18 21 0 0 0 chr10 25890813 25890834 -119698454 + AT_rich Low_complexity Low_complexity 1 21 0 1683 97 10 59 chr10 25892241 25892287 -119697001 + L1MA2 LINE L1 6029 6076 -228 2418 58 7 29 chr10 25892287 25892595 -119696693 + AluY SINE Alu 1 301 -10 1683 97 10 59 chr10 25892595 25892838 -119696450 + L1MA2 LINE L1 6076 6304 0 310 317 30 64 chr10 25892871 25893073 -119696215 - MIR3 SINE MIR -6 202 8 26 0 0 0 chr10 25895208 25895234 -119694054 + AT_rich Low_complexity Low_complexity 1 26 0 1864 149 10 3 chr10 25895786 25896081 -119693207 - AluJb SINE Alu -15 297 1 2278 98 3 0 chr10 25896601 25896897 -119692391 - AluSx SINE Alu -15 297 1 22 0 0 0 chr10 25896907 25896929 -119692359 + AT_rich Low_complexity Low_complexity 1 22 0 288 169 0 133 chr10 25897223 25897240 -119692048 - AluJo SINE Alu 0 302 284 252 59 0 0 chr10 25897240 25897274 -119692014 + (TG)n Simple_repeat Simple_repeat 1 34 0 288 169 0 133 chr10 25897274 25897339 -119691949 - AluJo SINE Alu -18 284 231 1492 151 12 27 chr10 25897339 25897598 -119691690 - AluJo SINE Alu -57 255 1 433 262 48 0 chr10 25898496 25898622 -119690666 + MIR SINE MIR 80 211 -51 1031 173 16 26 chr10 25898827 25899018 -119690270 + MER5A DNA MER1_type 1 189 0 215 426 15 15 chr10 25899317 25899453 -119689835 + L2 LINE L2 3123 3258 -14 213 333 13 0 chr10 25899450 25899528 -119689760 - MIR3 SINE MIR -5 203 125 * 1607 202 0 34 chr10 25899536 25899858 -119689430 + AluJo SINE Alu 1 311 -1 235 0 0 54 chr10 25901224 25901261 -119688027 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 2016 131 0 3 chr10 25901269 25901552 -119687736 - AluSx SINE Alu -30 282 1 311 264 30 12 chr10 25901947 25902114 -119687174 + (TA)n Simple_repeat Simple_repeat 1 170 0 180 0 0 0 chr10 25903330 25903350 -119685938 + (TCTG)n Simple_repeat Simple_repeat 2 21 0 1723 160 4 7 chr10 25904390 25904671 -119684617 - AluJb SINE Alu -21 291 12 402 74 0 0 chr10 25907683 25907737 -119681551 + (TG)n Simple_repeat Simple_repeat 2 55 0 24 77 0 0 chr10 25908923 25908975 -119680313 + AT_rich Low_complexity Low_complexity 1 52 0 1769 148 7 11 chr10 25909004 25909317 -119679971 - AluSx SINE Alu 0 317 6 189 0 0 0 chr10 25909508 25909529 -119679759 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 2184 101 0 0 chr10 25909529 25909807 -119679481 - AluSx SINE Alu -32 280 3 315 164 0 49 chr10 25911423 25911484 -119677804 - Tigger2a DNA MER2_type 0 434 377 2366 97 0 13 chr10 25911499 25911809 -119677479 + AluSx SINE Alu 1 306 -6 909 164 6 40 chr10 25911919 25912096 -119677192 - Tigger2a DNA MER2_type -263 171 1 1866 189 59 66 chr10 25912461 25912949 -119676339 - MLT1D LTR MaLR 0 505 21 2258 120 0 0 chr10 25914740 25915040 -119674248 + AluSq SINE Alu 1 300 -13 333 159 19 9 chr10 25916606 25916713 -119672575 + (CA)n Simple_repeat Simple_repeat 1 108 0 922 241 27 27 chr10 25917017 25917278 -119672010 - MIR SINE MIR 0 262 2 952 157 26 92 chr10 25919319 25919401 -119669887 - MER20 DNA MER1_type 0 219 133 2871 143 13 4 chr10 25919401 25919854 -119669434 - MSTB2 LTR MaLR 0 457 1 952 157 26 92 chr10 25919854 25920000 -119669288 - MER20 DNA MER1_type -86 133 6 636 250 0 7 chr10 25920239 25920387 -119668901 + MIR SINE MIR 26 172 -90 1925 154 13 13 chr10 25922542 25922841 -119666447 + AluJo SINE Alu 3 301 -11 469 298 19 0 chr10 25923056 25923264 -119666024 + L2 LINE L2 2545 2756 -558 189 0 0 0 chr10 25923906 25923927 -119665361 + (TTTTTA)n Simple_repeat Simple_repeat 5 25 0 * 600 153 0 0 chr10 25923926 25924044 -119665244 + (TA)n Simple_repeat Simple_repeat 1 118 0 2333 79 16 16 chr10 25924044 25924349 -119664939 - AluSx SINE Alu -7 305 1 895 157 13 26 chr10 25924375 25924528 -119664760 - FRAM SINE Alu -15 151 1 21 0 0 0 chr10 25924892 25924913 -119664375 + AT_rich Low_complexity Low_complexity 1 21 0 402 278 87 10 chr10 25925180 25925468 -119663820 + L2 LINE L2 2911 3313 0 189 275 25 38 chr10 25925576 25925656 -119663632 - MIR SINE MIR -87 175 97 908 283 102 20 chr10 25925672 25926132 -119663156 + L2 LINE L2 2304 2801 -513 330 284 0 71 chr10 25926147 25926274 -119663014 - MER94 DNA DNA -15 119 2 1169 266 64 39 chr10 25926292 25926776 -119662512 + L2 LINE L2 2815 3310 -3 304 232 14 0 chr10 25928738 25928807 -119660481 + L2 LINE L2 3238 3307 -6 543 122 12 12 chr10 25928974 25929056 -119660232 + AluJ/FRAM SINE Alu 214 295 -17 1919 141 37 7 chr10 25929390 25929688 -119659600 + AluJb SINE Alu 1 307 -5 2515 93 0 0 chr10 25931226 25931538 -119657750 - AluSx SINE Alu 0 312 1 2269 96 7 0 chr10 25932801 25933094 -119656194 - AluSx SINE Alu -17 295 1 338 200 0 0 chr10 25933717 25933787 -119655501 - AluS SINE Alu -3 299 230 1044 66 0 0 chr10 25933787 25933908 -119655380 - AluSq/x SINE Alu -192 121 1 186 133 0 0 chr10 25935343 25935373 -119653915 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 313 294 17 17 chr10 25936528 25936647 -119652641 - MIR SINE MIR -30 232 114 193 273 0 61 chr10 25937101 25937167 -119652121 - MIR SINE MIR -111 151 90 400 240 47 16 chr10 25937267 25937396 -119651892 - MIR SINE MIR -63 199 67 1778 175 45 0 chr10 25937399 25937685 -119651603 + AluJb SINE Alu 1 299 -13 1240 99 6 11 chr10 25937750 25937931 -119651357 + L1PB3 LINE L1 5968 6147 -7 1554 160 53 11 chr10 25938489 25938771 -119650517 + AluJb SINE Alu 1 294 -18 364 279 121 46 chr10 25939097 25939377 -119649911 - MARNA DNA Mariner -13 573 273 2301 109 3 6 chr10 25939399 25939712 -119649576 + AluSx SINE Alu 1 312 0 306 0 0 0 chr10 25940133 25940167 -119649121 + (TG)n Simple_repeat Simple_repeat 2 35 0 195 42 0 0 chr10 25940206 25940230 -119649058 + (TG)n Simple_repeat Simple_repeat 2 25 0 186 133 0 0 chr10 25940269 25940299 -119648989 + (TG)n Simple_repeat Simple_repeat 2 31 0 267 31 0 0 chr10 25940338 25940370 -119648918 + (TG)n Simple_repeat Simple_repeat 2 33 0 794 147 8 0 chr10 25940749 25940878 -119648410 + FLAM_C SINE Alu 1 130 -3 180 163 0 0 chr10 25941012 25941055 -119648233 + A-rich Low_complexity Low_complexity 1 43 0 2691 39 0 3 chr10 25941685 25941997 -119647291 - AluY SINE Alu 0 311 1 225 65 0 0 chr10 25942189 25942220 -119647068 + (T)n Simple_repeat Simple_repeat 1 31 0 203 263 0 92 chr10 25942565 25942641 -119646647 - L2 LINE L2 -53 3219 3151 1767 168 17 0 chr10 25942659 25942951 -119646337 + AluSg SINE Alu 1 297 -13 458 345 26 9 chr10 25943486 25943718 -119645570 - Charlie8 DNA MER1_type -2172 245 10 353 321 36 21 chr10 25944907 25945047 -119644241 - MER5B DNA MER1_type -1 177 36 2369 298 104 25 chr10 25946503 25947931 -119641357 + L1MEc LINE L1 45 1586 -4810 2278 240 78 6 chr10 25947929 25948613 -119640675 + L1M4 LINE L1 3589 4321 -1825 * 294 169 26 52 chr10 25948617 25948694 -119640594 + L1ME LINE L1 5770 5844 -322 252 235 153 31 chr10 25949226 25949246 -119640042 - L2 LINE L2 0 3313 3297 2592 108 19 100 chr10 25949246 25949718 -119639570 - Tigger2a DNA MER2_type 0 434 1 252 235 153 31 chr10 25949718 25949795 -119639493 - L2 LINE L2 -16 3297 3204 312 250 20 20 chr10 25949830 25949930 -119639358 + MIR SINE MIR 36 135 -73 429 259 18 0 chr10 25950134 25950246 -119639042 + MER5B DNA MER1_type 10 123 -55 192 258 97 21 chr10 25950652 25950745 -119638543 - L2 LINE L2 -294 3019 2920 689 87 0 0 chr10 25950748 25950840 -119638448 + AluSg/x SINE Alu 209 300 -9 1329 143 14 21 chr10 25951120 25951356 -119637932 + L1M3 LINE L1 5441 5664 -519 1943 105 0 25 chr10 25951387 25951663 -119637625 + AluY SINE Alu 37 305 -6 517 286 102 0 chr10 25951880 25952076 -119637212 - MIR SINE MIR -45 217 2 291 318 0 23 chr10 25952815 25952944 -119636344 - MIR SINE MIR -116 146 21 922 143 0 0 chr10 25953661 25953794 -119635494 + FLAM_A SINE Alu 1 133 0 2544 70 3 3 chr10 25954699 25955012 -119634276 + AluSp SINE Alu 1 313 0 32 86 0 0 chr10 25955594 25955675 -119633613 + AT_rich Low_complexity Low_complexity 1 81 0 2234 107 0 3 chr10 25955675 25955965 -119633323 - AluSx SINE Alu -23 289 1 1832 188 3 0 chr10 25956387 25956695 -119632593 + AluJo SINE Alu 1 309 -3 327 270 104 26 chr10 25957042 25957157 -119632131 + MER5A DNA MER1_type 66 189 0 1582 145 35 75 chr10 25957475 25957793 -119631495 + AluJb SINE Alu 1 305 -7 734 192 45 0 chr10 25957921 25958077 -119631211 + L1MA4 LINE L1 6127 6289 -11 201 121 0 0 chr10 25958170 25958203 -119631085 + (TTC)n Simple_repeat Simple_repeat 1 33 0 2132 128 7 0 chr10 25958310 25958607 -119630681 + AluSx SINE Alu 1 299 -13 854 171 40 92 chr10 25960064 25960292 -119628996 + MER20 DNA MER1_type 1 216 -3 276 100 0 0 chr10 25960339 25960379 -119628909 + (TC)n Simple_repeat Simple_repeat 1 40 0 427 276 8 16 chr10 25960926 25961053 -119628235 - L2 LINE L2 0 3313 3188 605 92 0 31 chr10 25961151 25961249 -119628039 + FLAM_C SINE Alu 48 142 -1 225 0 0 0 chr10 25961249 25961274 -119628014 + (TA)n Simple_repeat Simple_repeat 2 26 0 1062 162 15 41 chr10 25961281 25961478 -119627810 + AluJb SINE Alu 118 309 -3 24 0 0 0 chr10 25961478 25961502 -119627786 + AT_rich Low_complexity Low_complexity 1 24 0 1700 125 0 106 chr10 25961509 25961661 -119627627 + AluJo SINE Alu 3 107 -205 2007 120 57 0 chr10 25961661 25961944 -119627344 + AluSx SINE Alu 1 299 -13 1700 125 0 106 chr10 25961944 25962102 -119627186 + AluJo SINE Alu 107 280 -32 714 152 0 32 chr10 25962807 25962932 -119626356 + FRAM SINE Alu 33 153 -23 1504 138 89 0 chr10 25963312 25963559 -119625729 + AluSx SINE Alu 1 269 -43 1435 154 6 115 chr10 25963605 25963935 -119625353 + AluJo SINE Alu 3 296 -6 212 167 0 0 chr10 25964220 25964256 -119625032 + (CAT)n Simple_repeat Simple_repeat 3 38 0 715 180 21 142 chr10 25965621 25965860 -119623428 + MER63A DNA MER1_type 1 210 0 1780 152 7 14 chr10 25966304 25966593 -119622695 + AluJb SINE Alu 1 287 -25 855 289 88 41 chr10 25966761 25967339 -119621949 + L2 LINE L2 2682 3313 0 1214 221 45 26 chr10 25967592 25967908 -119621380 + L1ME1 LINE L1 5818 6139 -45 2580 91 16 67 chr10 25967908 25968294 -119620994 - L1PB1 LINE L1 -1 6150 5787 2457 97 3 0 chr10 25968294 25968605 -119620683 - AluSx SINE Alu 0 312 1 2580 91 16 67 chr10 25968605 25968648 -119620640 - L1PB1 LINE L1 -364 5787 5743 1214 221 45 26 chr10 25968648 25968695 -119620593 + L1ME1 LINE L1 6139 6184 0 201 133 0 0 chr10 25969905 25969935 -119619353 + (TG)n Simple_repeat Simple_repeat 2 31 0 1558 275 124 24 chr10 25970634 25971456 -119617832 + L2 LINE L2 1715 2618 -696 1460 195 0 45 chr10 25971973 25972260 -119617028 + AluJo SINE Alu 1 274 -38 345 140 0 0 chr10 25972265 25972322 -119616966 + (CA)n Simple_repeat Simple_repeat 1 57 0 283 256 0 35 chr10 25972464 25972550 -119616738 - MIR SINE MIR -66 142 60 300 27 0 0 chr10 25973159 25973196 -119616092 + (TG)n Simple_repeat Simple_repeat 1 37 0 238 282 53 30 chr10 25973728 25973859 -119615429 + MIR SINE MIR 16 149 -113 4413 206 48 46 chr10 25974265 25974986 -119614302 - L1MD2 LINE L1 -16 6326 5608 2311 114 0 0 chr10 25974986 25975293 -119613995 - AluSg SINE Alu -3 307 1 4413 206 48 46 chr10 25975293 25975324 -119613964 - L1MD2 LINE L1 -734 5608 5579 1725 162 7 16 chr10 25975324 25975627 -119613661 + AluJb SINE Alu 5 304 -8 4413 206 48 46 chr10 25975627 25976041 -119613247 - L1MD2 LINE L1 -763 5579 5150 2205 116 0 0 chr10 25976041 25976333 -119612955 + AluSq SINE Alu 1 292 -21 4413 206 48 46 chr10 25976333 25976628 -119612660 - L1MD2 LINE L1 -1192 5150 4857 706 99 40 0 chr10 25976628 25976729 -119612559 - AluSq/x SINE Alu -206 107 3 534 161 21 0 chr10 25976743 25976836 -119612452 + L1M4 LINE L1 5189 5283 -863 3561 230 67 29 chr10 25976839 25977041 -119612247 - L1MD2 LINE L1 -1280 4849 4656 2516 70 0 10 chr10 25977041 25977355 -119611933 - AluY SINE Alu 0 311 1 3561 230 67 29 chr10 25977355 25978250 -119611038 - L1MD2 LINE L1 -1473 4656 3711 479 281 87 32 chr10 25978244 25978375 -119610913 - L1MD2 LINE L1 -853 1637 1515 * 180 0 0 0 chr10 25978375 25978395 -119610893 + (TA)n Simple_repeat Simple_repeat 2 21 0 479 281 87 32 chr10 25978395 25978580 -119610708 - L1MD2 LINE L1 -975 1515 1342 348 24 0 0 chr10 25978580 25978621 -119610667 + (TG)n Simple_repeat Simple_repeat 2 42 0 479 281 87 32 chr10 25978621 25978881 -119610407 - L1MD2 LINE L1 -1148 1342 984 811 227 91 12 chr10 25979052 25979294 -119609994 + MLT1I LTR MaLR 149 409 0 26 30 0 0 chr10 25979702 25979735 -119609553 + AT_rich Low_complexity Low_complexity 1 33 0 200 302 0 0 chr10 25980381 25980444 -119608844 - MIR SINE MIR -13 249 187 2528 152 25 23 chr10 25980459 25980508 -119608780 + Tigger2a DNA MER2_type 1 48 -2660 3375 202 79 4 chr10 25980508 25981191 -119608097 + MER50 LTR ERV1 1 734 0 2528 152 25 23 chr10 25981191 25981574 -119607714 + Tigger2a DNA MER2_type 48 434 0 190 216 307 0 chr10 25981575 25981663 -119607625 - MIR SINE MIR -90 172 58 186 300 20 0 chr10 25982127 25982177 -119607111 + MIR SINE MIR 211 261 -1 2038 100 82 4 chr10 25982220 25982499 -119606789 + AluSg SINE Alu 1 301 -9 1158 241 103 28 chr10 25982571 25983216 -119606072 + L2 LINE L2 2527 3235 -78 2364 101 0 0 chr10 25983245 25983553 -119605735 - AluSx SINE Alu -4 308 1 1306 178 38 48 chr10 25983634 25983926 -119605362 + AluJo SINE Alu 1 289 -23 725 181 116 0 chr10 25984559 25984714 -119604574 + MER5A DNA MER1_type 17 189 0 1787 179 81 27 chr10 25985707 25986076 -119603212 - MLT1B LTR MaLR -1 389 1 21 0 0 0 chr10 25986652 25986673 -119602615 + AT_rich Low_complexity Low_complexity 1 21 0 2247 127 3 6 chr10 25987963 25988277 -119601011 + AluSq SINE Alu 1 313 0 217 274 0 0 chr10 25989007 25989058 -119600230 + CT-rich Low_complexity Low_complexity 2 52 0 594 75 0 0 chr10 25989076 25989156 -119600132 + (TTCC)n Simple_repeat Simple_repeat 1 80 0 219 36 0 0 chr10 25989768 25989796 -119599492 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 13796 52 3 3 chr10 25990045 25992523 -119596765 - L1PA5 LINE L1 -1 6153 3670 1720 167 7 24 chr10 25992729 25993044 -119596244 + AluJo SINE Alu 1 310 0 183 349 0 0 chr10 25993838 25993901 -119595387 + L3b LINE CR1 1296 1358 -225 594 193 25 144 chr10 25994654 25994774 -119594514 + MER96B DNA MER1_type? 3 136 -281 2041 82 4 11 chr10 25994774 25995043 -119594245 + AluY SINE Alu 5 271 -40 594 193 25 144 chr10 25995043 25995071 -119594217 + MER96B DNA MER1_type? 136 124 -293 1376 179 0 12 chr10 25995071 25995311 -119593977 + L1MC1 LINE L1 6086 6322 -11 594 193 25 144 chr10 25995311 25995363 -119593925 + MER96B DNA MER1_type? 123 180 -237 451 206 0 0 chr10 25996460 25996533 -119592755 + AluJ/FLAM SINE Alu 2 74 -238 761 132 0 0 chr10 25997088 25997194 -119592094 + FLAM_C SINE Alu 2 107 -36 545 161 31 0 chr10 25997216 25997346 -119591942 + GA-rich Low_complexity Low_complexity 1 134 0 2328 105 0 0 chr10 25997417 25997723 -119591565 - AluSg1 SINE Alu -3 306 1 216 0 0 0 chr10 25997909 25997933 -119591355 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 2076 100 4 7 chr10 25997936 25998215 -119591073 - AluSx SINE Alu -28 284 7 2328 104 0 0 chr10 25998922 25999219 -119590069 - AluSg SINE Alu -13 297 1 1931 156 0 10 chr10 25999467 25999756 -119589532 - AluSx SINE Alu -26 286 1 716 139 0 16 chr10 25999758 25999880 -119589408 - FLAM_A SINE Alu -2 140 21 411 309 44 12 chr10 26000870 26001037 -119588251 - MIR3 SINE MIR -24 184 13 214 238 0 0 chr10 26002385 26002427 -119586861 + GA-rich Low_complexity Low_complexity 1 42 0 204 170 19 38 chr10 26004841 26004894 -119584394 + CT-rich Low_complexity Low_complexity 2 53 0 255 170 0 0 chr10 26005720 26005767 -119583521 + T-rich Low_complexity Low_complexity 1 47 0 2055 130 0 35 chr10 26006631 26006946 -119582342 + AluJb SINE Alu 1 304 -8 2890 175 29 43 chr10 26007632 26007693 -119581595 - MER73 LTR ERVL 0 644 584 2347 80 0 0 chr10 26007693 26007980 -119581308 - AluY SINE Alu -24 287 1 2890 175 29 43 chr10 26007980 26008571 -119580717 - MER73 LTR ERVL -60 584 1 913 183 0 24 chr10 26008692 26008856 -119580432 - FRAM SINE Alu -17 159 1 332 311 172 0 chr10 26009019 26009170 -119580118 + MIR SINE MIR 68 244 -18 2144 119 3 3 chr10 26009181 26009476 -119579812 + AluSx SINE Alu 1 295 -17 256 213 93 73 chr10 26010569 26010719 -119578569 - MIR SINE MIR -3 259 107 1150 258 109 39 chr10 26011631 26012062 -119577226 - MER20B DNA MER1_type -322 461 1 2003 149 0 7 chr10 26012317 26012619 -119576669 + AluSx SINE Alu 1 300 -12 553 249 18 12 chr10 26012916 26013085 -119576203 - MER5B DNA MER1_type -6 172 3 2299 129 91 10 chr10 26014547 26014942 -119574346 - MSTA LTR MaLR 0 428 2 651 155 28 79 chr10 26016093 26016127 -119573161 + L1MA5A LINE L1 6112 6146 -154 2274 99 0 0 chr10 26016127 26016419 -119572869 - AluSg SINE Alu -18 292 1 651 155 28 79 chr10 26016419 26016567 -119572721 + L1MA5A LINE L1 6146 6284 -16 318 145 43 14 chr10 26016650 26016719 -119572569 + L1MA5A LINE L1 6221 6291 -6 1508 154 47 8 chr10 26017179 26017432 -119571856 + AluJo SINE Alu 33 295 -17 463 327 54 43 chr10 26017549 26017827 -119571461 - L3 LINE CR1 -525 1052 772 1729 161 50 20 chr10 26018024 26018322 -119570966 - AluJo SINE Alu -5 307 1 617 236 71 57 chr10 26018566 26018778 -119570510 + MER20 DNA MER1_type 5 219 0 216 245 19 19 chr10 26019034 26019087 -119570201 + CT-rich Low_complexity Low_complexity 2 54 0 23 0 0 0 chr10 26019853 26019876 -119569412 + AT_rich Low_complexity Low_complexity 1 23 0 1702 150 44 49 chr10 26020002 26020369 -119568919 + MLT1A1 LTR MaLR 1 365 0 1040 258 97 27 chr10 26020461 26021124 -119568164 - L1ME3A LINE L1 -8 6162 5406 805 233 110 27 chr10 26021138 26021442 -119567846 - MLT1E LTR MaLR -3 590 316 2303 235 48 32 chr10 26021612 26022530 -119566758 - L1ME1 LINE L1 -9 6155 5253 2167 139 0 0 chr10 26022530 26022833 -119566455 - AluSx SINE Alu -8 304 2 2303 235 48 32 chr10 26022833 26023630 -119565658 - L1ME1 LINE L1 -911 5253 4470 2362 86 3 0 chr10 26023630 26023933 -119565355 + AluSx SINE Alu 1 304 -8 2303 235 48 32 chr10 26023933 26024840 -119564448 - L1ME1 LINE L1 -1694 4470 3433 2136 137 0 0 chr10 26024840 26025147 -119564141 - AluSx SINE Alu -5 307 1 2303 235 48 32 chr10 26025147 26025330 -119563958 - L1ME1 LINE L1 -2731 3433 3254 710 225 57 16 chr10 26025440 26025684 -119563604 - L1M4 LINE L1 -2237 3909 3656 441 213 0 57 chr10 26025806 26025947 -119563341 - L1 LINE L1 -2168 3978 3846 587 254 71 8 chr10 26025985 26026225 -119563063 + MIR SINE MIR 5 259 -3 271 282 100 9 chr10 26026271 26026381 -119562907 + MER115 DNA AcHobo 2 121 -572 430 315 45 6 chr10 26026486 26026664 -119562624 + MER115 DNA AcHobo 162 346 -347 513 248 0 0 chr10 26026690 26026811 -119562477 + MER115 DNA AcHobo 563 683 -10 1847 113 146 7 chr10 26027199 26027474 -119561814 + AluSq SINE Alu 1 313 0 2386 47 7 23 chr10 26027650 26027949 -119561339 + AluY SINE Alu 1 294 -17 889 219 14 35 chr10 26027997 26028376 -119560912 - MER54B LTR ERVL 0 793 453 1601 143 17 123 chr10 26029811 26030160 -119559128 + AluJo SINE Alu 1 312 0 2178 121 0 3 chr10 26031858 26032156 -119557132 + AluSx SINE Alu 1 297 -15 335 250 18 53 chr10 26032501 26032644 -119556644 + MIR SINE MIR 25 156 -52 424 204 53 26 chr10 26032646 26032759 -119556529 - MLT1J LTR MaLR 0 511 396 298 173 0 0 chr10 26032934 26032986 -119556302 - MLT1J LTR MaLR -361 150 99 331 291 23 0 chr10 26033041 26033127 -119556161 + MIR SINE MIR 174 261 -1 304 217 248 12 chr10 26033399 26033560 -119555728 - MER102b DNA MER1_type -27 314 116 301 293 75 9 chr10 26034913 26035019 -119554269 + L1ME LINE L1 712 824 -5295 468 331 55 7 chr10 26035026 26035171 -119554117 - MIR SINE MIR -83 179 28 774 285 79 29 chr10 26035259 26036007 -119553281 + L1ME LINE L1 895 1717 -4593 402 206 115 99 chr10 26036546 26036789 -119552499 + L1ME LINE L1 2264 2510 -3619 279 256 93 17 chr10 26036977 26037149 -119552139 + L1ME LINE L1 2729 2913 -3216 342 299 136 0 chr10 26037420 26037604 -119551684 + L1ME LINE L1 4784 4992 -1137 435 219 70 31 chr10 26037701 26037829 -119551459 - L2 LINE L2 -5 3308 3176 211 274 41 55 chr10 26037902 26037975 -119551313 - MIR SINE MIR -186 76 5 560 184 37 29 chr10 26038048 26038184 -119551104 + MER105 DNA DNA 47 183 -21 439 191 11 0 chr10 26038184 26038273 -119551015 + AluJ/FRAM SINE Alu 217 306 -6 310 263 137 99 chr10 26039239 26039288 -119550000 + L1ME LINE L1 5287 5333 -816 2213 111 3 16 chr10 26039288 26039604 -119549684 + AluSx SINE Alu 1 312 0 310 263 137 99 chr10 26039604 26039847 -119549441 + L1ME LINE L1 5333 5523 -626 851 150 0 8 chr10 26039853 26039986 -119549302 + AluJb SINE Alu 6 137 -175 872 243 188 25 chr10 26040156 26040886 -119548402 + L1M4 LINE L1 2113 2961 -3185 1216 131 180 71 chr10 26040983 26041250 -119548038 + AluJb SINE Alu 1 296 -6 832 228 159 31 chr10 26041286 26041769 -119547519 + MER20B DNA MER1_type 239 783 0 185 326 0 0 chr10 26041769 26041818 -119547470 + MIR3 SINE MIR 153 201 -7 387 262 134 27 chr10 26041863 26042049 -119547239 - MIR SINE MIR -27 235 14 189 94 0 0 chr10 26043080 26043112 -119546176 + (TA)n Simple_repeat Simple_repeat 2 33 0 1569 168 34 4 chr10 26045636 26045904 -119543384 + AluJb SINE Alu 1 276 -36 713 172 25 8 chr10 26046031 26046153 -119543135 - AluJb SINE Alu -186 126 3 199 316 152 38 chr10 26046519 26046677 -119542611 + MIR3 SINE MIR 31 206 -2 942 252 102 22 chr10 26046913 26047326 -119541962 + L1MC4 LINE L1 7597 8042 0 820 175 109 53 chr10 26047374 26047659 -119541629 + Zaphod DNA AcHobo 3377 3677 -354 416 244 71 24 chr10 26047700 26047868 -119541420 + L1MC5 LINE L1 7726 7901 -60 198 71 0 0 chr10 26049811 26049839 -119539449 + (A)n Simple_repeat Simple_repeat 1 28 0 584 128 21 0 chr10 26051027 26051121 -119538167 - AluJ/FRAM SINE Alu -3 309 214 330 210 0 0 chr10 26051123 26051185 -119538103 - AluJo/FLAM SINE Alu -192 110 49 963 163 326 0 chr10 26051413 26051634 -119537654 + AluJb SINE Alu 18 310 -2 309 191 0 0 chr10 26053054 26053117 -119536171 + L1MC5 LINE L1 7156 7218 -743 785 118 44 59 chr10 26053234 26053369 -119535919 + FLAM_C SINE Alu 1 133 0 631 186 322 0 chr10 26056486 26056663 -119532625 + Tigger7 DNA MER2_type 1 234 -2253 568 165 10 0 chr10 26056664 26056761 -119532527 + Tigger7 DNA MER2_type 2482 2579 -8 201 276 66 40 chr10 26057079 26057155 -119532133 + L2 LINE L2 3228 3305 -8 776 248 96 22 chr10 26057679 26057909 -119531379 + MIR SINE MIR 10 256 -6 290 241 115 11 chr10 26057971 26058058 -119531230 - MIR SINE MIR -2 260 165 185 270 0 0 chr10 26058101 26058138 -119531150 + L2 LINE L2 3249 3285 -28 2341 84 0 0 chr10 26058722 26059021 -119530267 + AluY SINE Alu 1 299 -12 22 0 0 0 chr10 26059414 26059436 -119529852 + AT_rich Low_complexity Low_complexity 1 22 0 29 60 0 0 chr10 26060393 26060443 -119528845 + AT_rich Low_complexity Low_complexity 1 50 0 222 327 71 9 chr10 26061314 26061427 -119527861 - L2 LINE L2 -249 3064 2945 1327 281 239 35 chr10 26061495 26062586 -119526702 - L2 LINE L2 -497 2817 1448 1750 73 14 5 chr10 26062586 26062806 -119526482 + AluSq SINE Alu 1 222 -91 1327 281 239 35 chr10 26062806 26062938 -119526350 - L2 LINE L2 -1866 1448 1344 24 32 0 0 chr10 26063077 26063108 -119526180 + AT_rich Low_complexity Low_complexity 1 31 0 583 329 111 19 chr10 26064543 26064972 -119524316 + L1MC4a LINE L1 4533 5005 -1141 590 285 129 16 chr10 26065222 26065477 -119523811 + L1MC4a LINE L1 5313 5538 -2270 1698 99 53 19 chr10 26065477 26065739 -119523549 + AluSq SINE Alu 40 310 -3 590 285 129 16 chr10 26065739 26065978 -119523310 + L1MC4a LINE L1 5538 5863 -1945 21 0 0 0 chr10 26068769 26068790 -119520498 + AT_rich Low_complexity Low_complexity 1 21 0 2222 92 17 0 chr10 26068964 26069258 -119520030 + AluSx SINE Alu 1 299 -13 376 314 39 69 chr10 26069998 26070290 -119518998 + MLT1K LTR MaLR 138 412 -176 2257 118 0 10 chr10 26070290 26070603 -119518685 + AluSx SINE Alu 1 310 -2 376 314 39 69 chr10 26070603 26070775 -119518513 + MLT1K LTR MaLR 412 588 0 2330 74 0 3 chr10 26071441 26071753 -119517535 + AluY SINE Alu 1 311 0 267 329 0 24 chr10 26073057 26073139 -119516149 + MIR3 SINE MIR 77 156 -52 2289 84 28 0 chr10 26073383 26073667 -119515621 + AluSg SINE Alu 5 296 -14 2301 105 0 10 chr10 26073773 26074077 -119515211 + AluSq SINE Alu 1 301 -12 252 241 213 35 chr10 26074441 26074582 -119514706 + MIR SINE MIR 20 185 -77 1917 129 10 26 chr10 26074635 26074944 -119514344 - AluSx SINE Alu -6 306 3 22 0 0 0 chr10 26074946 26074968 -119514320 + AT_rich Low_complexity Low_complexity 1 22 0 510 179 0 0 chr10 26075855 26075950 -119513338 + Charlie3 DNA MER1_type 1 95 -2615 217 211 84 42 chr10 26076801 26076872 -119512416 - MER91C DNA MER1_type -30 110 37 * 401 313 13 40 chr10 26076863 26077013 -119512275 + MIR SINE MIR 22 167 -95 819 272 57 73 chr10 26077111 26077796 -119511492 - L2 LINE L2 -3 3310 2635 25 0 0 0 chr10 26080887 26080912 -119508376 + AT_rich Low_complexity Low_complexity 1 25 0 477 0 0 0 chr10 26081302 26081355 -119507933 + (TA)n Simple_repeat Simple_repeat 2 54 0 2328 107 0 0 chr10 26083206 26083506 -119505782 - AluSx SINE Alu -10 302 3 207 267 0 0 chr10 26083919 26083964 -119505324 + GA-rich Low_complexity Low_complexity 1 45 0 216 0 0 0 chr10 26084168 26084192 -119505096 + (A)n Simple_repeat Simple_repeat 1 24 0 24 32 0 0 chr10 26084434 26084465 -119504823 + AT_rich Low_complexity Low_complexity 1 31 0 225 320 0 52 chr10 26084696 26084793 -119504495 + MIR3 SINE MIR 15 106 -102 259 350 25 33 chr10 26084817 26084937 -119504351 + MIR SINE MIR 2 120 -142 2070 156 22 14 chr10 26085155 26085515 -119503773 + MLT1A1 LTR MaLR 1 363 -2 294 143 0 0 chr10 26087641 26087690 -119501598 + (TA)n Simple_repeat Simple_repeat 2 50 0 368 250 23 0 chr10 26087695 26087783 -119501505 - L1MC4 LINE L1 -1339 6703 6614 336 284 23 0 chr10 26087719 26087807 -119501481 + L1MC4 LINE L1 6614 6703 -1339 * 279 0 0 0 chr10 26087821 26087852 -119501436 + (TA)n Simple_repeat Simple_repeat 1 31 0 2346 88 0 28 chr10 26087852 26088169 -119501119 - AluSg SINE Alu 0 310 3 1932 151 0 3 chr10 26089369 26089661 -119499627 - AluSx SINE Alu -21 291 1 1958 104 0 0 chr10 26089993 26090266 -119499022 + AluSq SINE Alu 44 316 0 1792 147 26 36 chr10 26090583 26090889 -119498399 - AluJb SINE Alu -9 303 1 23 78 0 0 chr10 26091928 26091979 -119497309 + AT_rich Low_complexity Low_complexity 1 51 0 22 0 0 0 chr10 26092449 26092471 -119496817 + AT_rich Low_complexity Low_complexity 1 22 0 928 74 0 8 chr10 26092752 26092873 -119496415 - AluSg/x SINE Alu -3 306 187 488 272 118 48 chr10 26094197 26094394 -119494894 - MIR SINE MIR -12 250 33 2196 96 3 3 chr10 26094394 26094713 -119494575 - AluSg SINE Alu 0 310 1 488 272 118 48 chr10 26094713 26094743 -119494545 - MIR SINE MIR -229 33 7 284 316 116 11 chr10 26094732 26094827 -119494461 - L2 LINE L2 -46 3226 3122 * 217 341 12 12 chr10 26094974 26095056 -119494232 - MER5B DNA MER1_type -95 83 2 810 140 260 0 chr10 26095159 26095309 -119493979 + MER5A DNA MER1_type 1 189 0 265 261 201 38 chr10 26095692 26095876 -119493412 + L2 LINE L2 3100 3313 0 233 241 234 55 chr10 26095875 26096020 -119493268 - MIR SINE MIR -58 204 34 * 2332 84 0 7 chr10 26096735 26097033 -119492255 - AluSg SINE Alu -14 296 1 21 0 0 0 chr10 26097883 26097904 -119491384 + AT_rich Low_complexity Low_complexity 1 21 0 233 377 0 0 chr10 26097965 26098042 -119491246 + MIR SINE MIR 2 78 -184 373 178 44 0 chr10 26098068 26098158 -119491130 + MER53 DNA DNA 96 189 0 543 257 46 29 chr10 26098167 26098342 -119490946 + MIR SINE MIR 85 262 0 202 244 0 0 chr10 26098402 26098447 -119490841 + L2 LINE L2 3219 3263 -9 28 79 0 0 chr10 26098734 26098797 -119490491 + AT_rich Low_complexity Low_complexity 1 63 0 819 157 0 0 chr10 26099034 26099155 -119490133 + 5S rRNA rRNA 1 121 0 23 0 0 0 chr10 26099155 26099178 -119490110 + AT_rich Low_complexity Low_complexity 1 23 0 2208 107 0 10 chr10 26100582 26100882 -119488406 + AluSg1 SINE Alu 1 297 -12 395 239 152 49 chr10 26100905 26101089 -119488199 - L1MC5 LINE L1 -60 7901 7699 2681 20 0 0 chr10 26101115 26101412 -119487876 + AluY SINE Alu 14 310 -1 332 234 0 0 chr10 26101720 26101784 -119487504 + L2 LINE L2 3245 3308 -5 300 137 0 20 chr10 26102014 26102065 -119487223 - L2 LINE L2 -2 3311 3262 274 83 0 0 chr10 26102395 26102431 -119486857 + U6 snRNA snRNA 2 37 -70 786 149 22 30 chr10 26102748 26102882 -119486406 - FLAM_C SINE Alu 0 133 1 409 294 123 72 chr10 26103336 26104049 -119485239 + L2 LINE L2 1799 2548 -766 185 309 85 21 chr10 26104045 26104139 -119485149 + L2 LINE L2 2953 3052 -220 * 1960 162 0 10 chr10 26104167 26104470 -119484818 + AluSx SINE Alu 1 300 -12 670 256 144 18 chr10 26104578 26104863 -119484425 - L2 LINE L2 -8 3305 2985 1265 171 167 0 chr10 26105238 26105477 -119483811 + AluJb SINE Alu 1 279 -33 794 186 0 0 chr10 26105496 26105620 -119483668 + FLAM_C SINE Alu 1 124 -9 402 158 85 0 chr10 26105650 26105732 -119483556 + L1MA6 LINE L1 6208 6296 -4 321 248 119 20 chr10 26106521 26106622 -119482666 - L2 LINE L2 -3 3310 3200 2065 117 10 7 chr10 26106707 26107007 -119482281 - AluSx SINE Alu -11 301 1 261 301 29 10 chr10 26107233 26107336 -119481952 - L3 LINE CR1 -284 1293 1189 2227 97 7 3 chr10 26107366 26107666 -119481622 + AluSq SINE Alu 1 301 -12 242 283 0 0 chr10 26107878 26107938 -119481350 + (TATG)n Simple_repeat Simple_repeat 3 62 0 327 240 64 72 chr10 26108836 26108961 -119480327 + L1ME LINE L1 1071 1194 -5011 263 200 35 12 chr10 26108989 26109074 -119480214 + L1ME LINE L1 1599 1685 -4711 650 160 0 113 chr10 26109093 26109243 -119480045 + FLAM_A SINE Alu 1 133 0 832 269 21 8 chr10 26110024 26110356 -119478932 + LTR16B LTR ERVL 54 442 -22 609 265 73 5 chr10 26110423 26110642 -119478646 + L1ME LINE L1 3785 4018 -2197 226 187 119 75 chr10 26110642 26110776 -119478512 + L1ME LINE L1 4575 4714 -1501 272 250 71 0 chr10 26110786 26110870 -119478418 + L1ME LINE L1 4793 4882 -1333 803 191 111 0 chr10 26110870 26111032 -119478256 - MER58C DNA MER1_type 0 215 36 743 300 78 13 chr10 26111037 26111513 -119477775 + L1ME LINE L1 4873 5379 -836 1455 233 24 5 chr10 26111528 26111905 -119477383 + L1ME LINE L1 5455 5838 -401 666 251 0 0 chr10 26111936 26112099 -119477189 - L1ME1 LINE L1 -5 6161 5999 2495 49 10 13 chr10 26112161 26112465 -119476823 + AluY SINE Alu 1 303 -8 534 210 0 67 chr10 26112465 26112584 -119476704 - FLAM_A SINE Alu -27 115 5 385 169 101 0 chr10 26112600 26112689 -119476599 - L1ME1 LINE L1 -209 5955 5858 * 11533 66 11 9 chr10 26112686 26114400 -119474888 + L1PA5 LINE L1 3853 5402 -744 2683 85 30 82 chr10 26114446 26115120 -119474168 + SVA Other Other 393 868 -603 1291 84 0 28 chr10 26115225 26115474 -119473814 + SVA Other Other 625 866 -520 6477 65 13 51 chr10 26115491 26116483 -119472805 + SVA Other Other 433 1386 0 5856 58 13 7 chr10 26116483 26117237 -119472051 + L1PA5 LINE L1 5392 6150 -4 2124 178 19 2 chr10 26117239 26117667 -119471621 + L1ME2 LINE L1 5280 5714 -460 2327 85 7 0 chr10 26117731 26118024 -119471264 - AluSp SINE Alu -18 295 1 737 183 8 0 chr10 26118082 26118213 -119471075 - FLAM_C SINE Alu -1 132 1 620 214 143 0 chr10 26118255 26118409 -119470879 + MIR SINE MIR 41 216 -46 231 188 0 0 chr10 26118438 26118486 -119470802 + (CAT)n Simple_repeat Simple_repeat 1 48 0 1074 117 6 25 chr10 26118657 26118820 -119470468 + FRAM SINE Alu 11 170 -6 206 150 25 25 chr10 26119506 26119586 -119469702 + (TTATA)n Simple_repeat Simple_repeat 4 83 0 23 0 0 0 chr10 26120670 26120693 -119468595 + AT_rich Low_complexity Low_complexity 1 23 0 592 260 95 21 chr10 26120735 26120954 -119468334 + MIR SINE MIR 15 245 -17 626 276 106 5 chr10 26121329 26121546 -119467742 - MER8 DNA MER2_type 0 239 1 2189 115 0 0 chr10 26121952 26122238 -119467050 - AluSx SINE Alu -26 286 1 644 207 50 45 chr10 26122238 26122417 -119466871 - MER20 DNA MER1_type -38 181 2 2203 100 0 3 chr10 26122684 26123005 -119466283 + AluSc SINE Alu 1 320 0 985 195 104 45 chr10 26123785 26124139 -119465149 + L1ME2 LINE L1 5742 6116 -48 1276 181 159 50 chr10 26124152 26124432 -119464856 + L1MD3 LINE L1 7547 7885 -110 2256 74 0 3 chr10 26124432 26124739 -119464549 - AluY SINE Alu 0 306 1 1276 181 159 50 chr10 26124739 26124854 -119464434 + L1MD3 LINE L1 7885 7986 -9 615 211 19 26 chr10 26125638 26125794 -119463494 - L2 LINE L2 -880 2434 2280 554 270 201 5 chr10 26126418 26126622 -119462666 - MIR SINE MIR -2 260 17 2322 186 113 32 chr10 26126629 26127188 -119462100 + MER6A DNA MER2_type 2 605 0 22 0 0 0 chr10 26127574 26127596 -119461692 + AT_rich Low_complexity Low_complexity 1 22 0 271 296 96 35 chr10 26127738 26127853 -119461435 - MIR3 SINE MIR -6 202 81 340 333 45 32 chr10 26127929 26128085 -119461203 + MIR SINE MIR 88 245 -17 21 0 0 0 chr10 26128481 26128502 -119460786 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr10 26128956 26128979 -119460309 + AT_rich Low_complexity Low_complexity 1 23 0 439 293 99 33 chr10 26129016 26129258 -119460030 + HAL1 LINE L1 1017 1274 -1233 4319 226 166 16 chr10 26129277 26130133 -119459155 + L2 LINE L2 684 1410 -1904 1677 167 16 39 chr10 26130133 26130439 -119458849 - AluJo SINE Alu -13 299 1 4319 226 166 16 chr10 26130439 26130981 -119458307 + L2 LINE L2 1410 2292 -1022 349 211 13 0 chr10 26131187 26131263 -119458025 + MLT1J1 LTR MaLR 68 144 -302 1822 213 60 70 chr10 26131292 26131989 -119457299 + L1ME1 LINE L1 4314 5003 -1143 2243 113 3 10 chr10 26131989 26132291 -119456997 + AluSx SINE Alu 1 300 -12 1822 213 60 70 chr10 26132291 26132395 -119456893 + L1ME1 LINE L1 5003 5107 -1039 289 125 36 0 chr10 26132462 26132518 -119456770 + L1ME1 LINE L1 5127 5184 -962 1822 139 14 37 chr10 26132522 26132661 -119456627 + AluJo SINE Alu 1 142 -170 2125 102 46 0 chr10 26132661 26132946 -119456342 + AluSx SINE Alu 1 298 -14 1822 139 14 37 chr10 26132946 26133101 -119456187 + AluJo SINE Alu 142 288 -24 192 152 0 0 chr10 26133124 26133157 -119456131 + (CA)n Simple_repeat Simple_repeat 2 34 0 2380 188 68 39 chr10 26133158 26133999 -119455289 + L1ME1 LINE L1 5180 6161 -5 1994 131 7 7 chr10 26134278 26134576 -119454712 + AluSx SINE Alu 4 301 -11 329 198 0 79 chr10 26134691 26134792 -119454496 - L1PA16 LINE L1 -4 6162 6070 1537 106 38 0 chr10 26134861 26135096 -119454192 + L1PB4 LINE L1 5908 6151 -5 490 296 116 5 chr10 26135125 26135324 -119453964 + MIR SINE MIR 32 252 -10 1933 119 0 58 chr10 26135331 26135641 -119453647 + AluSg SINE Alu 1 292 -18 265 283 22 43 chr10 26136214 26136306 -119452982 - L2 LINE L2 -1 3312 3223 1569 181 21 91 chr10 26136321 26136390 -119452898 - L1MD2 LINE L1 -1 6358 6286 850 135 0 8 chr10 26136390 26136523 -119452765 + FLAM_C SINE Alu 2 133 0 1569 181 21 91 chr10 26136523 26136884 -119452404 - L1MD2 LINE L1 -73 6286 5958 1047 168 13 109 chr10 26136902 26137205 -119452083 - AluSq SINE Alu -2 311 38 3416 152 3 8 chr10 26137206 26137564 -119451724 - L1MD2 LINE L1 -389 5970 5615 1736 161 60 14 chr10 26137564 26137911 -119451377 - MLT1A1 LTR MaLR -2 363 1 3416 152 3 8 chr10 26137911 26138159 -119451129 - L1MD2 LINE L1 -744 5615 5367 1865 23 0 0 chr10 26138208 26138422 -119450866 - L1PA4 LINE L1 -16 6139 5926 188 407 23 0 chr10 26138501 26138587 -119450701 - MIR SINE MIR -85 123 36 281 305 8 8 chr10 26139593 26139721 -119449567 + L1MB8 LINE L1 6046 6173 -5 630 253 131 15 chr10 26140312 26140510 -119448778 + MIR SINE MIR 20 240 -22 2161 79 7 4 chr10 26141245 26141525 -119447763 + AluY SINE Alu 21 301 -10 840 132 0 0 chr10 26141902 26142023 -119447265 - AluJb SINE Alu -13 299 179 1912 165 0 0 chr10 26142414 26142711 -119446577 + AluSx SINE Alu 1 297 -15 2251 105 0 7 chr10 26143042 26143348 -119445940 - AluSx SINE Alu -8 304 1 2054 104 0 0 chr10 26144008 26144267 -119445021 + AluSq SINE Alu 6 264 -49 1722 169 11 0 chr10 26144558 26144876 -119444412 + AluJb SINE Alu 1 321 0 254 268 12 0 chr10 26144930 26145012 -119444276 + L1ME LINE L1 5800 5882 -239 1063 145 25 133 chr10 26145312 26145553 -119443735 + AluJb SINE Alu 1 215 -97 185 319 210 42 chr10 26145648 26145767 -119443521 + L2 LINE L2 3116 3254 -18 282 246 0 142 chr10 26146464 26146518 -119442770 - MIR SINE MIR -11 197 171 2110 108 0 7 chr10 26146518 26146813 -119442475 + AluSx SINE Alu 1 293 -19 282 246 0 142 chr10 26146813 26146892 -119442396 - MIR SINE MIR -37 171 82 441 313 54 27 chr10 26147463 26147610 -119441678 - MIR3 SINE MIR -27 181 31 409 255 82 96 chr10 26147684 26147867 -119441421 - L1ME4a LINE L1 0 6121 5937 1894 148 0 14 chr10 26147867 26148158 -119441130 + AluJb SINE Alu 1 287 -25 1031 138 0 11 chr10 26148168 26148349 -119440939 + (TATATG)n Simple_repeat Simple_repeat 2 180 0 409 255 82 96 chr10 26148349 26148902 -119440386 - L1ME4a LINE L1 -193 5928 5385 2160 115 3 0 chr10 26148960 26149248 -119440040 + AluSx SINE Alu 5 293 -19 297 151 0 0 chr10 26149263 26149316 -119439972 + (CA)n Simple_repeat Simple_repeat 2 54 0 472 311 110 16 chr10 26150531 26150785 -119438503 - L2 LINE L2 -894 2420 2143 33 43 0 0 chr10 26150795 26150842 -119438446 + AT_rich Low_complexity Low_complexity 1 47 0 1102 243 60 44 chr10 26150905 26150959 -119438329 + L1ME3A LINE L1 5716 5768 -402 2140 125 13 6 chr10 26150959 26151270 -119438018 + AluSq SINE Alu 1 313 0 1102 243 60 44 chr10 26151270 26151647 -119437641 + L1ME3A LINE L1 5768 6154 -16 249 312 113 32 chr10 26151669 26151748 -119437540 + L2 LINE L2 2703 2774 -540 2260 70 0 54 chr10 26151748 26152062 -119437226 - AluSq SINE Alu -16 297 1 249 312 113 32 chr10 26152062 26152203 -119437085 + L2 LINE L2 2774 2941 -373 229 303 76 62 chr10 26152286 26152431 -119436857 + L2 LINE L2 3150 3296 -17 2389 199 60 0 chr10 26152677 26153180 -119436108 + MER68 LTR ERV1 1 533 -29 2221 123 13 0 chr10 26153182 26153525 -119435763 + AluSx SINE Alu 1 347 0 1583 230 45 68 chr10 26153592 26153700 -119435588 + MLT1E LTR MaLR 28 137 -456 2110 129 7 0 chr10 26153700 26153994 -119435294 + AluSx SINE Alu 5 300 -12 1583 230 45 68 chr10 26153994 26154458 -119434830 + MLT1E LTR MaLR 137 587 -6 653 228 127 47 chr10 26154468 26154931 -119434357 + L1MEc LINE L1 79 622 -5774 723 314 61 19 chr10 26155012 26155423 -119433865 + HERV16 LTR ERVL 1002 1429 -3567 230 174 0 22 chr10 26155748 26155794 -119433494 + GA-rich Low_complexity Low_complexity 4 48 0 2376 89 0 9 chr10 26155984 26156300 -119432988 + AluSq SINE Alu 1 313 0 237 287 139 41 chr10 26156682 26156804 -119432484 - MIR3 SINE MIR -19 189 56 2234 87 3 0 chr10 26157727 26158034 -119431254 - AluSx SINE Alu 0 308 1 473 275 188 5 chr10 26158101 26158308 -119430980 + MIR SINE MIR 18 262 0 437 247 160 33 chr10 26159233 26159383 -119429905 - MER5A DNA MER1_type -12 177 9 524 277 171 27 chr10 26159873 26160244 -119429044 - L2 LINE L2 -237 3076 2660 2572 59 0 3 chr10 26160534 26160840 -119428448 - AluY SINE Alu -6 305 1 1272 170 31 18 chr10 26160981 26161204 -119428084 - AluJb SINE Alu -1 311 86 391 252 46 0 chr10 26161235 26161366 -119427922 + L1ME LINE L1 5616 5752 -369 22 0 0 0 chr10 26161655 26161677 -119427611 + AT_rich Low_complexity Low_complexity 1 22 0 350 313 146 26 chr10 26161752 26161985 -119427303 - MIR SINE MIR 0 262 2 646 257 69 10 chr10 26162290 26162492 -119426796 + Charlie8 DNA MER1_type 2 215 -2202 1866 134 42 23 chr10 26162688 26162867 -119426421 - AluJb SINE Alu 0 312 123 2167 120 3 13 chr10 26162867 26163176 -119426112 - AluSx SINE Alu -4 308 3 1866 134 42 23 chr10 26163176 26163302 -119425986 - AluJb SINE Alu -189 123 1 253 283 151 46 chr10 26165623 26165775 -119423513 + MIR SINE MIR 79 246 -16 652 306 133 28 chr10 26165807 26166373 -119422915 + L2 LINE L2 2130 2754 -560 208 336 164 0 chr10 26166617 26166739 -119422549 + L2 LINE L2 2085 2226 -1088 2936 160 34 24 chr10 26166844 26167432 -119421856 - L1PB4 LINE L1 -5 6151 5558 2114 180 9 32 chr10 26167435 26167865 -119421423 + L1 LINE L1 3256 3694 -2452 1735 187 3 7 chr10 26167865 26168164 -119421124 + AluJo SINE Alu 1 298 -14 2114 180 9 32 chr10 26168164 26168180 -119421108 + L1 LINE L1 3694 3709 -2437 225 0 0 0 chr10 26168180 26168205 -119421083 + (CAA)n Simple_repeat Simple_repeat 3 27 0 2114 180 9 32 chr10 26168205 26168285 -119421003 + L1 LINE L1 3709 3771 -2375 487 288 87 93 chr10 26168735 26169058 -119420230 + L2 LINE L2 2944 3264 -8 2178 118 0 0 chr10 26169228 26169525 -119419763 + AluSg SINE Alu 6 302 -8 303 234 0 0 chr10 26169526 26169603 -119419685 + GA-rich Low_complexity Low_complexity 1 77 0 373 185 111 85 chr10 26170239 26170331 -119418957 + MLT1D LTR MaLR 12 100 -367 2059 126 7 7 chr10 26170331 26170625 -119418663 - AluSx SINE Alu -18 294 1 373 185 111 85 chr10 26170625 26170757 -119418531 + MLT1D LTR MaLR 100 256 -211 1901 153 46 6 chr10 26170774 26171101 -119418187 + MER2 DNA MER2_type 1 340 -4 24 32 0 0 chr10 26171839 26171870 -119417418 + AT_rich Low_complexity Low_complexity 1 31 0 832 142 0 8 chr10 26172048 26172182 -119417106 - FLAM_C SINE Alu 0 133 1 2377 88 13 0 chr10 26173162 26173469 -119415819 + AluY SINE Alu 1 311 0 343 267 0 0 chr10 26175543 26175618 -119413670 - MIR SINE MIR -185 77 3 1723 120 39 25 chr10 26175619 26175931 -119413357 + AluJo SINE Alu 1 316 0 1488 167 26 34 chr10 26176284 26176553 -119412735 + AluJo SINE Alu 1 267 -45 1148 119 0 0 chr10 26176600 26176751 -119412537 + AluSq/x SINE Alu 1 151 -162 1455 161 66 49 chr10 26177004 26177309 -119411979 - AluJb SINE Alu -2 310 1 2287 105 0 3 chr10 26178255 26178551 -119410737 - AluSx SINE Alu -15 297 3 207 0 0 0 chr10 26178943 26178966 -119410322 + (TTTG)n Simple_repeat Simple_repeat 3 25 0 1598 126 114 11 chr10 26179406 26179677 -119409611 + AluSg SINE Alu 1 299 -11 27 29 0 0 chr10 26180528 26180562 -119408726 + AT_rich Low_complexity Low_complexity 1 34 0 829 138 29 36 chr10 26181087 26181225 -119408063 + FLAM_C SINE Alu 1 137 -6 347 282 74 20 chr10 26181273 26181422 -119407866 + HAL1b LINE L1 58 214 -1134 393 253 99 50 chr10 26181483 26181665 -119407623 + MLT1J LTR MaLR 71 261 -250 468 176 0 0 chr10 26181669 26181754 -119407534 + MER53 DNA DNA 1 85 -104 295 202 10 71 chr10 26181685 26181784 -119407504 - MER53 DNA DNA -7 182 90 * 183 80 0 0 chr10 26181785 26181810 -119407478 + (A)n Simple_repeat Simple_repeat 1 25 0 825 178 14 7 chr10 26181869 26182015 -119407273 + AluJo SINE Alu 5 151 -161 519 213 0 0 chr10 26182024 26182118 -119407170 - AluJ/FLAM SINE Alu -217 95 2 996 231 42 5 chr10 26182250 26182466 -119406822 - MER58A DNA MER1_type 0 224 1 2182 114 3 7 chr10 26182499 26182798 -119406490 - AluSq SINE Alu -15 298 1 25 0 0 0 chr10 26182873 26182898 -119406390 + AT_rich Low_complexity Low_complexity 1 25 0 804 176 0 0 chr10 26182900 26183025 -119406263 - FLAM_C SINE Alu -18 125 1 225 282 77 0 chr10 26183134 26183212 -119406076 - MLT1J LTR MaLR -52 459 376 322 133 0 167 chr10 26183275 26183317 -119405971 - MER53 DNA DNA 0 189 167 1946 112 0 76 chr10 26183317 26183643 -119405645 - AluSg SINE Alu 0 303 1 322 133 0 167 chr10 26183643 26183689 -119405599 - MER53 DNA DNA -22 167 115 1292 152 0 27 chr10 26183690 26183914 -119405374 - AluJo SINE Alu -11 301 84 216 0 0 0 chr10 26184032 26184056 -119405232 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 2264 68 0 7 chr10 26184058 26184337 -119404951 - AluSg1 SINE Alu -32 277 1 302 261 42 2 chr10 26184367 26184500 -119404788 + L1P5 LINE L1 5306 5442 -712 1773 92 0 9 chr10 26184715 26184944 -119404344 + AluSg/x SINE Alu 65 291 -21 1123 273 64 8 chr10 26185042 26185430 -119403858 + L2 LINE L2 2389 2798 -516 650 219 89 113 chr10 26185525 26185895 -119403393 + L2 LINE L2 2936 3296 -17 681 266 0 0 chr10 26185909 26186067 -119403221 + FRAM SINE Alu 4 161 -5 328 123 15 15 chr10 26186071 26186136 -119403152 + A-rich Low_complexity Low_complexity 4 68 0 227 180 0 80 chr10 26186269 26186319 -119402969 + Alu SINE Alu 123 168 -135 460 139 0 14 chr10 26186319 26186391 -119402897 + AluJ/FLAM SINE Alu 15 85 -227 1764 144 118 9 chr10 26186715 26187063 -119402225 + LOR1b LTR ERV1 1 386 -75 2280 93 7 0 chr10 26187076 26187365 -119401923 + AluSc SINE Alu 1 291 -18 24 32 0 0 chr10 26187426 26187457 -119401831 + AT_rich Low_complexity Low_complexity 1 31 0 24 32 0 0 chr10 26187463 26187494 -119401794 + AT_rich Low_complexity Low_complexity 1 31 0 28 0 0 0 chr10 26187505 26187533 -119401755 + AT_rich Low_complexity Low_complexity 1 28 0 232 259 23 23 chr10 26187543 26187674 -119401614 + (TTTA)n Simple_repeat Simple_repeat 3 133 0 2235 119 0 0 chr10 26187897 26188199 -119401089 - AluSq SINE Alu -11 302 1 234 0 0 0 chr10 26189311 26189337 -119399951 + (A)n Simple_repeat Simple_repeat 1 26 0 2190 99 3 3 chr10 26189625 26189919 -119399369 + AluSx SINE Alu 1 294 -18 2032 123 35 0 chr10 26190869 26191154 -119398134 - AluSx SINE Alu -17 295 1 1180 218 45 42 chr10 26191380 26191442 -119397846 + Charlie2 DNA MER1_type 2426 2486 -376 1585 185 3 54 chr10 26191442 26191755 -119397533 + AluJo SINE Alu 1 297 -15 1477 181 34 31 chr10 26191760 26192052 -119397236 + AluJo SINE Alu 3 295 -17 1180 218 45 42 chr10 26192052 26192160 -119397128 + Charlie2 DNA MER1_type 2489 2595 -267 2079 128 3 13 chr10 26192160 26192473 -119396815 - AluSx SINE Alu -2 310 1 1180 218 45 42 chr10 26192473 26192695 -119396593 + Charlie2 DNA MER1_type 2595 2826 -36 2594 67 0 3 chr10 26193191 26193527 -119395761 - AluY SINE Alu 0 335 1 297 0 0 0 chr10 26193659 26193692 -119395596 + (TG)n Simple_repeat Simple_repeat 2 34 0 1822 172 0 0 chr10 26193693 26193978 -119395310 - AluSx SINE Alu -27 285 1 1459 155 4 4 chr10 26194091 26194317 -119394971 + AluSx SINE Alu 61 286 -26 1900 134 14 7 chr10 26194927 26195210 -119394078 + AluSx SINE Alu 1 285 -27 29 0 0 0 chr10 26195210 26195239 -119394049 + AT_rich Low_complexity Low_complexity 1 29 0 471 288 78 29 chr10 26195778 26195983 -119393305 - MIR SINE MIR -42 220 6 2145 107 11 0 chr10 26196061 26196364 -119392924 + AluSx SINE Alu 1 306 0 225 128 0 0 chr10 26196365 26196404 -119392884 + L1MDa LINE L1 83 121 -6419 * 4292 135 67 52 chr10 26196403 26197092 -119392196 + L1MD1 LINE L1 5378 6083 -159 2393 79 0 25 chr10 26197092 26197410 -119391878 - AluSq SINE Alu -3 310 1 4292 135 67 52 chr10 26197410 26197562 -119391726 + L1MD1 LINE L1 6083 6231 -11 2113 135 0 10 chr10 26197707 26198018 -119391270 + AluSx SINE Alu 1 308 -4 263 158 0 0 chr10 26198270 26198327 -119390961 - L1MB3 LINE L1 0 6183 6127 678 152 22 36 chr10 26198354 26198462 -119390826 - L1MB3 LINE L1 -245 5938 5831 1603 191 10 10 chr10 26198462 26198760 -119390528 - AluJo SINE Alu -14 298 1 678 152 22 36 chr10 26198760 26198789 -119390499 - L1MB3 LINE L1 -352 5831 5803 2235 83 3 38 chr10 26198789 26199103 -119390185 + AluSx SINE Alu 1 303 -9 1866 133 4 4 chr10 26199180 26199451 -119389837 + AluJb SINE Alu 18 288 -24 1822 161 10 73 chr10 26199465 26199876 -119389412 - L1MB3 LINE L1 -377 5806 5422 809 21 21 0 chr10 26200187 26200284 -119389004 - AluY SINE Alu -3 308 210 817 165 8 8 chr10 26200306 26200439 -119388849 - FLAM_C SINE Alu 0 133 1 1275 111 6 11 chr10 26200555 26200736 -119388552 - AluSx SINE Alu -131 181 2 26 0 0 0 chr10 26200736 26200762 -119388526 + AT_rich Low_complexity Low_complexity 1 26 0 191 250 27 88 chr10 26200891 26201039 -119388249 + L2 LINE L2 2948 3086 -186 795 196 0 0 chr10 26201149 26201282 -119388006 + FLAM_C SINE Alu 1 133 0 1978 117 185 27 chr10 26201296 26201663 -119387625 - MSTA LTR MaLR -3 425 1 246 296 148 0 chr10 26202483 26202571 -119386717 + L3 LINE CR1 1449 1549 -28 231 215 15 15 chr10 26203729 26203794 -119385494 + L1MC4 LINE L1 6639 6703 -1339 216 111 0 0 chr10 26203794 26203830 -119385458 + (TA)n Simple_repeat Simple_repeat 2 37 0 2049 125 7 20 chr10 26203913 26204210 -119385078 - AluSx SINE Alu -19 293 1 2140 128 0 10 chr10 26204225 26204537 -119384751 - AluSx SINE Alu -3 309 1 4827 129 52 45 chr10 26204919 26204999 -119384289 + Tigger3b DNA MER2_type 1 79 -2949 2033 123 0 14 chr10 26204999 26205321 -119383967 + AluSx SINE Alu 1 312 0 4827 129 52 45 chr10 26205321 26205866 -119383422 + Tigger3b DNA MER2_type 79 638 -2390 2022 144 0 0 chr10 26205866 26206164 -119383124 + AluSx SINE Alu 1 298 -14 4827 129 52 45 chr10 26206164 26206458 -119382830 + Tigger3b DNA MER2_type 638 928 -303 704 160 0 69 chr10 26206581 26206712 -119382576 + FLAM_C SINE Alu 2 123 -10 23 0 0 0 chr10 26206712 26206735 -119382553 + AT_rich Low_complexity Low_complexity 1 23 0 387 41 0 0 chr10 26208032 26208081 -119381207 + (TC)n Simple_repeat Simple_repeat 1 49 0 242 346 71 30 chr10 26208083 26208378 -119380910 + L2 LINE L2 2183 2489 -825 485 91 13 0 chr10 26208494 26208571 -119380717 + L1MA9 LINE L1 6234 6311 -1 209 30 61 0 chr10 26208712 26208745 -119380543 + (TTTA)n Simple_repeat Simple_repeat 4 38 0 904 176 0 20 chr10 26208749 26208902 -119380386 - AluJb SINE Alu -23 289 140 1849 140 43 10 chr10 26209002 26209302 -119379986 - AluSx SINE Alu -2 310 1 23 54 0 0 chr10 26209304 26209341 -119379947 + AT_rich Low_complexity Low_complexity 1 37 0 315 151 174 0 chr10 26209848 26209934 -119379354 + L1M4 LINE L1 4296 4396 -1750 * 495 460 21 61 chr10 26209907 26209937 -119379351 + L1MEc LINE L1 5 35 -6361 180 0 0 0 chr10 26209937 26209957 -119379331 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 495 460 21 61 chr10 26209957 26210304 -119378984 + L1MEc LINE L1 35 367 -6029 1755 177 20 3 chr10 26210335 26210670 -119378618 + AluJo SINE Alu 8 347 0 465 184 16 16 chr10 26210672 26210797 -119378491 + GA-rich Low_complexity Low_complexity 3 127 0 3142 245 60 12 chr10 26210804 26211721 -119377567 + L1MEc LINE L1 393 1353 -5043 249 292 0 10 chr10 26211755 26211851 -119377437 + L1MEc LINE L1 2518 2612 -3603 * 1096 204 43 26 chr10 26211822 26212167 -119377121 + L1MEc LINE L1 3740 4138 -2077 1341 121 35 65 chr10 26212171 26212196 -119377092 + AluSg/x SINE Alu 86 110 -236 2779 82 3 0 chr10 26212196 26212550 -119376738 + THE1A LTR MaLR 1 355 0 1341 121 35 65 chr10 26212550 26212792 -119376496 + AluSg/x SINE Alu 110 346 0 384 240 164 34 chr10 26213396 26213542 -119375746 + MER5A DNA MER1_type 13 177 -12 411 275 188 5 chr10 26214466 26214673 -119374615 - MIR SINE MIR 0 262 18 2092 112 18 0 chr10 26214740 26215042 -119374246 + AluSx SINE Alu 1 307 0 222 231 31 0 chr10 26215047 26215112 -119374176 - MIR SINE MIR -150 112 46 1379 197 4 0 chr10 26216944 26217193 -119372095 - L1PB4 LINE L1 0 6156 5907 1318 128 4 100 chr10 26217245 26217526 -119371762 - L1PA16 LINE L1 -230 5936 5683 1370 148 0 43 chr10 26217934 26218164 -119371124 + AluJb SINE Alu 93 312 0 2282 127 15 66 chr10 26218910 26219033 -119370255 - MLT1B LTR MaLR 0 390 262 2164 114 33 0 chr10 26219033 26219332 -119369956 - AluSx SINE Alu -3 309 1 2282 127 15 66 chr10 26219332 26219506 -119369782 - MLT1B LTR MaLR -128 262 117 1779 187 42 22 chr10 26219506 26219864 -119369424 + MLT1A1 LTR MaLR 1 365 0 2282 127 15 66 chr10 26219864 26219976 -119369312 - MLT1B LTR MaLR -273 117 1 1888 178 0 3 chr10 26220232 26220536 -119368752 + AluJo SINE Alu 1 303 -9 1655 183 7 13 chr10 26220846 26221146 -119368142 + AluJo SINE Alu 5 302 -10 930 120 0 0 chr10 26221160 26221293 -119367995 + FLAM_C SINE Alu 1 133 0 2118 137 0 0 chr10 26221919 26222212 -119367076 - AluSx SINE Alu -19 293 1 257 300 50 78 chr10 26222310 26222490 -119366798 + L2 LINE L2 3138 3312 -1 782 279 70 30 chr10 26222735 26223036 -119366252 + L3 LINE CR1 1133 1445 -132 1785 124 0 4 chr10 26223108 26223357 -119365931 - AluSx SINE Alu -47 265 18 1879 153 0 38 chr10 26223409 26223723 -119365565 + AluJo SINE Alu 1 302 -10 380 74 19 0 chr10 26223723 26223777 -119365511 - HAL1 LINE L1 -1482 1025 971 2205 131 0 0 chr10 26224771 26225083 -119364205 + AluSx SINE Alu 1 312 0 790 263 114 105 chr10 26225147 26225839 -119363449 - HAL1 LINE L1 -140 2367 1662 2196 120 0 10 chr10 26225839 26226140 -119363148 - AluSx SINE Alu -14 298 1 790 263 114 105 chr10 26226140 26226425 -119362863 - HAL1 LINE L1 -845 1662 1381 1612 182 6 42 chr10 26226758 26227071 -119362217 + AluJo SINE Alu 1 302 -10 560 262 37 0 chr10 26227252 26227416 -119361872 + MER112 DNA MER1_type 80 249 -11 462 303 105 110 chr10 26227419 26227685 -119361603 + L3 LINE CR1 580 846 -731 1470 193 44 4 chr10 26227685 26227982 -119361306 - AluJo SINE Alu 0 308 1 462 303 105 110 chr10 26227982 26228113 -119361175 + L3 LINE CR1 846 976 -601 1822 153 0 14 chr10 26228188 26228483 -119360805 - AluSx SINE Alu -21 291 1 186 43 0 0 chr10 26228540 26228563 -119360725 + (T)n Simple_repeat Simple_repeat 1 23 0 1012 166 0 6 chr10 26228682 26228851 -119360437 + AluJb SINE Alu 136 303 -9 294 189 0 19 chr10 26228863 26228916 -119360372 - Alu SINE Alu -248 54 3 57 16 0 0 chr10 26228928 26228992 -119360296 + AT_rich Low_complexity Low_complexity 1 64 0 2431 95 0 0 chr10 26229492 26229797 -119359491 + AluSg SINE Alu 1 305 -5 263 176 54 68 chr10 26230011 26230085 -119359203 + AluSp SINE Alu 97 169 -134 2161 133 0 0 chr10 26230779 26231081 -119358207 - AluSq SINE Alu -11 302 1 1627 165 7 24 chr10 26231086 26231247 -119358041 - AluJo SINE Alu -18 294 139 1962 160 10 3 chr10 26231247 26231553 -119357735 - AluJb SINE Alu -4 308 1 1627 165 7 24 chr10 26231553 26231688 -119357600 - AluJo SINE Alu -173 139 3 609 151 12 0 chr10 26231868 26231954 -119357334 + AluS SINE Alu 2 88 -225 1161 125 6 6 chr10 26232056 26232224 -119357064 - AluSx SINE Alu -144 168 1 2202 182 78 25 chr10 26232229 26232679 -119356609 + MLT2B1 LTR ERVL 5 485 -35 2635 113 83 10 chr10 26232679 26233078 -119356210 + MSTA LTR MaLR 1 428 0 2202 182 78 25 chr10 26233078 26233117 -119356171 + MLT2B1 LTR ERVL 485 520 0 758 179 0 8 chr10 26233414 26233537 -119355751 + FLAM_C SINE Alu 1 122 -11 351 316 9 26 chr10 26233776 26233890 -119355398 + L2 LINE L2 3178 3289 -24 206 326 67 0 chr10 26234203 26234292 -119354996 + MIR SINE MIR 84 146 -62 1938 127 33 0 chr10 26234363 26234669 -119354619 - AluSx SINE Alu 0 315 1 201 143 125 89 chr10 26235278 26235334 -119353954 - L2 LINE L2 -56 3257 3200 1232 263 178 61 chr10 26235765 26236907 -119352381 - L2 LINE L2 -37 3276 2009 472 325 146 36 chr10 26236942 26237305 -119351983 - L2 LINE L2 0 3272 2870 1338 130 10 0 chr10 26237411 26237611 -119351677 - AluSx SINE Alu -57 255 54 227 322 168 37 chr10 26237617 26238207 -119351081 - L2 LINE L2 -616 2698 2032 288 0 0 0 chr10 26238735 26238767 -119350521 + (CA)n Simple_repeat Simple_repeat 2 33 0 1706 141 36 7 chr10 26240492 26240769 -119348519 - AluJo SINE Alu -7 305 21 1859 159 27 3 chr10 26241053 26241348 -119347940 - AluJb SINE Alu -9 303 2 2263 122 3 0 chr10 26241721 26242032 -119347256 - AluSx SINE Alu 0 312 1 754 185 7 30 chr10 26242044 26242179 -119347109 - FLAM_C SINE Alu -1 132 1 23 0 0 29 chr10 26243254 26243270 -119346018 + AT_rich Low_complexity Low_complexity 1 16 -17 2291 86 7 3 chr10 26243270 26243561 -119345727 + AluSx SINE Alu 1 292 -20 23 0 0 29 chr10 26243561 26243578 -119345710 + AT_rich Low_complexity Low_complexity 16 33 0 593 178 178 7 chr10 26243602 26243754 -119345534 - MIR SINE MIR -1 261 84 642 200 0 0 chr10 26243786 26243891 -119345397 + AluSq/x SINE Alu 3 107 -205 202 192 19 19 chr10 26243911 26243963 -119345325 + (TAA)n Simple_repeat Simple_repeat 2 53 0 879 211 6 6 chr10 26243988 26244154 -119345134 - AluJo SINE Alu -146 166 1 304 346 29 0 chr10 26244157 26244261 -119345027 - MIR SINE MIR -60 148 42 2828 160 20 71 chr10 26244607 26244828 -119344460 + LTR64 LTR ERVK 1 232 -326 1979 114 34 20 chr10 26244828 26245125 -119344163 - AluSx SINE Alu -11 301 1 2828 160 20 71 chr10 26245125 26245491 -119343797 + LTR64 LTR ERVK 232 558 0 558 105 58 0 chr10 26245647 26245733 -119343555 + AluY SINE Alu 204 294 -17 1788 165 3 10 chr10 26245784 26246075 -119343213 + AluJo SINE Alu 1 289 -23 2200 104 4 0 chr10 26246086 26246366 -119342922 + AluSx SINE Alu 6 286 -26 252 269 65 11 chr10 26246532 26246625 -119342663 - L2 LINE L2 -6 3266 3169 1231 167 4 44 chr10 26246974 26247201 -119342087 - AluJo SINE Alu -9 303 86 358 232 29 29 chr10 26247249 26247391 -119341897 + MIR SINE MIR 11 151 -62 525 292 129 10 chr10 26247392 26247601 -119341687 + MIR SINE MIR 21 254 -8 211 363 44 0 chr10 26247613 26247704 -119341584 + MIR SINE MIR 167 261 -1 1508 192 18 59 chr10 26247794 26248132 -119341156 - MLT1D LTR MaLR -1 504 181 1241 87 0 6 chr10 26248141 26248302 -119340986 - AluSp SINE Alu -16 297 138 918 153 41 29 chr10 26248305 26248475 -119340813 - MLT1D LTR MaLR -316 189 18 1811 132 3 53 chr10 26248717 26249020 -119340268 - AluJo SINE Alu -22 290 3 1568 193 33 20 chr10 26249550 26249856 -119339432 + AluJo SINE Alu 1 310 -2 195 42 0 0 chr10 26249876 26249900 -119339388 + (TTTTC)n Simple_repeat Simple_repeat 3 26 0 641 165 83 0 chr10 26249903 26250012 -119339276 - FLAM_C SINE Alu -24 119 2 419 236 154 0 chr10 26250388 26250511 -119338777 - MIR SINE MIR -49 213 72 758 154 15 22 chr10 26250513 26250649 -119338639 + AluJb SINE Alu 85 219 -93 407 188 0 0 chr10 26250651 26250720 -119338568 + AluSp/q SINE Alu 190 258 -45 987 123 6 11 chr10 26250744 26250923 -119338365 + (GAAA)n Simple_repeat Simple_repeat 3 180 0 892 129 79 7 chr10 26251857 26251996 -119337292 + FAM SINE Alu 18 166 -19 182 229 83 0 chr10 26252112 26252160 -119337128 + L2 LINE L2 3262 3313 0 1669 155 38 17 chr10 26252190 26252481 -119336807 + AluJo SINE Alu 1 297 -15 2816 196 22 17 chr10 26252490 26253032 -119336256 - MER44D DNA MER2_type 0 605 6 1548 152 168 0 chr10 26253495 26253804 -119335484 + MER46B DNA MER2_type 1 236 0 2113 137 0 0 chr10 26254024 26254324 -119334964 + AluSx SINE Alu 1 300 -12 22 0 0 0 chr10 26254503 26254525 -119334763 + AT_rich Low_complexity Low_complexity 1 22 0 3025 115 31 31 chr10 26254530 26254669 -119334619 - L1MB2 LINE L1 -7 6164 6026 1327 106 125 19 chr10 26254669 26254877 -119334411 + MER30 DNA MER1_type 1 230 0 3025 115 31 31 chr10 26254877 26255214 -119334074 - L1MB2 LINE L1 -144 6027 5688 1784 87 4 0 chr10 26255868 26256099 -119333189 - L1PA8 LINE L1 0 6172 5941 2437 45 0 7 chr10 26257243 26257535 -119331753 - AluY SINE Alu -20 291 2 2037 120 30 7 chr10 26257699 26257999 -119331289 - AluSq SINE Alu -6 307 1 1985 96 11 28 chr10 26258327 26258609 -119330679 - AluSq SINE Alu -5 308 32 304 263 38 0 chr10 26258649 26258729 -119330559 - L2 LINE L2 -5 3267 3185 676 270 58 39 chr10 26258753 26259012 -119330276 + Charlie7 DNA MER1_type 1 264 -2348 1933 112 9 71 chr10 26259037 26259360 -119329928 - AluSx SINE Alu -7 305 3 2558 217 35 68 chr10 26259402 26259887 -119329401 - L1MB8 LINE L1 0 6178 5678 955 32 24 0 chr10 26259887 26260013 -119329275 + (TTTC)n Simple_repeat Simple_repeat 2 130 0 1603 171 16 0 chr10 26260017 26260274 -119329014 - AluSx SINE Alu -51 261 1 2558 217 35 68 chr10 26260274 26260987 -119328301 - L1MB8 LINE L1 -503 5675 5024 1182 106 12 0 chr10 26261035 26261196 -119328092 - AluSg/x SINE Alu -17 295 133 342 253 0 10 chr10 26261196 26261295 -119327993 - L1MB8 LINE L1 -1143 5003 4906 * 3896 236 30 35 chr10 26261288 26262358 -119326930 - L1MB8 LINE L1 -1572 4574 3509 1389 146 172 4 chr10 26262358 26262625 -119326663 - AluJb SINE Alu 0 312 1 3896 236 30 35 chr10 26262625 26262735 -119326553 - L1MB8 LINE L1 -2637 3509 3400 499 106 15 0 chr10 26262740 26262806 -119326482 + AluJ/FLAM SINE Alu 2 68 -244 5965 53 0 7 chr10 26262896 26262907 -119326381 + L1P LINE L1 3042 3052 -3094 5242 69 0 0 chr10 26262907 26263527 -119325761 - L1PA5 LINE L1 -5 6149 5530 5965 53 0 7 chr10 26263527 26264283 -119325005 + L1P LINE L1 3052 3804 -2342 694 244 62 31 chr10 26264280 26264337 -119324951 - L1MB8 LINE L1 -2740 3406 3352 * 786 125 62 47 chr10 26264337 26264465 -119324823 - FLAM_C SINE Alu -3 130 1 694 244 62 31 chr10 26264465 26264731 -119324557 - L1MB8 LINE L1 -2794 3352 3073 5654 193 24 20 chr10 26264766 26266538 -119322750 + L1PBa LINE L1 1 985 -5219 1012 117 7 0 chr10 26266538 26266675 -119322613 + AluSq/x SINE Alu 1 138 -174 10329 187 26 6 chr10 26266677 26268779 -119320509 + L1 LINE L1 2230 4373 -1773 579 85 0 12 chr10 26268782 26268864 -119320424 + L1P5 LINE L1 5447 5527 -624 1876 158 3 3 chr10 26268864 26269155 -119320133 - AluJb SINE Alu -20 292 2 936 156 0 15 chr10 26269176 26269311 -119319977 - FLAM_C SINE Alu 0 133 1 1596 197 44 38 chr10 26269311 26269776 -119319512 - L1MB8 LINE L1 -3061 3085 2615 374 234 219 0 chr10 26269892 26270020 -119319268 - L1MEc LINE L1 -4699 1697 1542 751 236 117 37 chr10 26270044 26270396 -119318892 - L1MEc LINE L1 -5020 1376 997 1962 140 13 0 chr10 26270477 26270777 -119318511 - AluSx SINE Alu -8 304 1 399 256 30 57 chr10 26270893 26270972 -119318316 + L1MEc LINE L1 1515 1544 -963 2453 125 120 5 chr10 26270972 26271356 -119317932 + MSTA LTR MaLR 1 428 0 399 256 30 57 chr10 26271356 26271479 -119317809 + L1MEc LINE L1 1544 1669 -838 1698 176 63 9 chr10 26271485 26271804 -119317484 + MER7A DNA MER2_type 1 334 -12 387 290 105 15 chr10 26272124 26272270 -119317018 + MER5A DNA MER1_type 26 183 -6 1027 212 46 92 chr10 26272314 26272630 -119316658 - MER21B LTR ERV1 -107 809 497 796 230 91 34 chr10 26272629 26272938 -119316350 - MER21B LTR ERV1 -486 377 1 * 2102 140 109 18 chr10 26273001 26273387 -119315901 - MSTA LTR MaLR -2 426 6 417 281 67 28 chr10 26273411 26273589 -119315699 + MIR SINE MIR 14 198 -64 1733 162 3 26 chr10 26273597 26273899 -119315389 + AluJo SINE Alu 1 295 -17 21 0 0 0 chr10 26274267 26274288 -119315000 + AT_rich Low_complexity Low_complexity 1 21 0 223 68 85 0 chr10 26274328 26274387 -119314901 + (TA)n Simple_repeat Simple_repeat 1 64 0 2015 129 28 3 chr10 26274603 26274890 -119314398 - AluSx SINE Alu -18 294 1 606 180 0 0 chr10 26275089 26275189 -119314099 + FLAM_C SINE Alu 32 131 -12 21 0 0 0 chr10 26275189 26275210 -119314078 + AT_rich Low_complexity Low_complexity 1 21 0 1484 252 96 67 chr10 26275238 26275609 -119313679 + MLT1G1 LTR MaLR 2 361 -234 771 198 86 30 chr10 26275609 26275806 -119313482 + MER3 DNA MER1_type 2 209 0 1484 252 96 67 chr10 26275806 26275909 -119313379 + MLT1G1 LTR MaLR 361 460 -135 2239 107 3 0 chr10 26275909 26276208 -119313080 - AluSg SINE Alu -10 300 1 1484 252 96 67 chr10 26276208 26276296 -119312992 + MLT1G1 LTR MaLR 460 581 -14 1661 144 44 44 chr10 26276304 26276602 -119312686 - AluJo SINE Alu -4 308 11 376 256 0 0 chr10 26277020 26277098 -119312190 - MER91A DNA MER1_type -38 158 81 558 108 0 0 chr10 26278174 26278257 -119311031 + (CA)n Simple_repeat Simple_repeat 2 84 0 1730 163 0 18 chr10 26280907 26281190 -119308098 + AluJo SINE Alu 5 282 -30 195 308 55 22 chr10 26281760 26281851 -119307437 + MIR SINE MIR 156 249 -13 444 323 111 0 chr10 26282495 26282684 -119306604 + L3b LINE CR1 1150 1359 -224 1710 133 0 0 chr10 26282765 26283005 -119306283 - AluSx SINE Alu -72 240 1 820 166 83 7 chr10 26283006 26283151 -119306137 - AluJb SINE Alu -24 288 133 794 168 0 0 chr10 26283763 26283882 -119305406 + FLAM_A SINE Alu 13 131 -11 2076 93 41 0 chr10 26283887 26284156 -119305132 + AluSx SINE Alu 6 285 -27 889 238 32 20 chr10 26284440 26284688 -119304600 + MIR SINE MIR 12 262 0 207 0 0 0 chr10 26285829 26285852 -119303436 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1884 156 7 7 chr10 26286065 26286372 -119302916 + AluJo SINE Alu 1 307 -5 2035 144 30 0 chr10 26286393 26286692 -119302596 + AluSx SINE Alu 1 308 -4 1003 103 0 58 chr10 26286699 26286854 -119302434 + FRAM SINE Alu 27 172 -4 2180 120 0 19 chr10 26286855 26287171 -119302117 + AluSx SINE Alu 1 310 -2 2450 107 79 60 chr10 26289567 26289816 -119299472 + MSTA LTR MaLR 1 263 -165 1805 152 50 0 chr10 26289816 26290093 -119299195 - AluSx SINE Alu -21 291 1 2450 107 79 60 chr10 26290093 26290263 -119299025 + MSTA LTR MaLR 263 428 0 514 311 40 0 chr10 26290274 26290425 -119298863 + L2 LINE L2 3111 3267 -5 2288 106 0 3 chr10 26290645 26290946 -119298342 + AluSx SINE Alu 1 300 -12 510 169 38 141 chr10 26291729 26291766 -119297522 - HAL1 LINE L1 -10 2497 2458 1822 145 7 3 chr10 26291766 26292092 -119297196 + AluSx SINE Alu 1 327 0 510 169 38 141 chr10 26292092 26292266 -119297022 - HAL1 LINE L1 -49 2458 2307 760 182 15 8 chr10 26292354 26292486 -119296802 - FLAM_C SINE Alu 0 133 1 24 32 0 0 chr10 26292566 26292597 -119296691 + AT_rich Low_complexity Low_complexity 1 31 0 231 238 286 0 chr10 26292789 26292894 -119296394 - L1MC4 LINE L1 -312 7730 7596 1107 149 52 85 chr10 26292904 26292916 -119296372 + Tigger1 DNA MER2_type 2 13 -2405 1924 119 0 11 chr10 26292916 26293185 -119296103 - AluSx SINE Alu -9 303 38 1107 149 52 85 chr10 26293185 26293420 -119295868 + Tigger1 DNA MER2_type 13 241 -2177 2139 99 7 16 chr10 26293420 26293724 -119295564 - AluSx SINE Alu -7 305 5 3809 106 38 34 chr10 26293727 26294340 -119294948 + Tigger1 DNA MER2_type 1076 1690 -728 636 167 25 7 chr10 26294342 26294580 -119294708 + AluJ SINE Alu 2 301 -11 5103 111 23 8 chr10 26294580 26295310 -119293978 + Tigger1 DNA MER2_type 1678 2418 0 2075 135 0 0 chr10 26295381 26295684 -119293604 + AluSx SINE Alu 1 303 0 203 304 0 0 chr10 26295698 26295754 -119293534 + L2 LINE L2 3257 3312 -1 225 196 0 0 chr10 26296174 26296220 -119293068 + GA-rich Low_complexity Low_complexity 2 47 0 2267 128 0 0 chr10 26296626 26296938 -119292350 + AluSx SINE Alu 1 312 0 448 198 18 30 chr10 26297325 26297492 -119291796 + GA-rich Low_complexity Low_complexity 1 165 0 266 203 0 14 chr10 26297537 26297606 -119291682 + GA-rich Low_complexity Low_complexity 2 69 0 1981 132 42 3 chr10 26298351 26298640 -119290648 - AluSx SINE Alu -12 300 1 864 195 11 74 chr10 26299064 26299254 -119290034 - AluJo SINE Alu -84 228 51 1354 166 40 8 chr10 26299444 26299691 -119289597 - L1MA4A LINE L1 0 6303 6049 1814 159 7 7 chr10 26300665 26300954 -119288334 - AluJo SINE Alu -23 289 1 2021 104 4 0 chr10 26301370 26301638 -119287650 + AluSx SINE Alu 35 303 -9 228 297 11 11 chr10 26303254 26303345 -119285943 + L1MC4 LINE L1 6613 6703 -1339 1695 166 6 56 chr10 26303354 26303673 -119285615 - AluJo SINE Alu -9 303 1 292 187 75 84 chr10 26304185 26304292 -119284996 + MLT1K LTR MaLR 461 566 -22 1135 143 0 11 chr10 26304447 26304622 -119284666 - FRAM SINE Alu -6 170 1 2447 159 39 14 chr10 26305286 26305319 -119283969 - L1MA6 LINE L1 -4 6296 6265 2688 121 3 18 chr10 26305319 26305700 -119283588 + THE1C LTR MaLR 1 375 0 2447 159 39 14 chr10 26305700 26306107 -119283181 - L1MA6 LINE L1 -35 6265 5845 984 182 0 12 chr10 26306394 26306564 -119282724 - FRAM SINE Alu -7 169 2 746 150 0 17 chr10 26306643 26306763 -119282525 + FLAM_C SINE Alu 2 119 -24 180 0 0 0 chr10 26306763 26306783 -119282505 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 383 284 21 0 chr10 26306833 26306928 -119282360 + MIR SINE MIR 158 254 -8 2229 110 0 0 chr10 26306959 26307249 -119282039 + AluSg SINE Alu 1 290 -20 612 175 0 0 chr10 26307259 26307356 -119281932 - FLAM_C SINE Alu -8 135 39 274 242 125 47 chr10 26307502 26307630 -119281658 - HAL1 LINE L1 -2112 395 258 819 204 25 13 chr10 26307721 26307878 -119281410 - AluJo SINE Alu -152 160 2 2055 148 0 0 chr10 26308169 26308466 -119280822 - AluSx SINE Alu -15 297 1 307 222 14 0 chr10 26308470 26308542 -119280746 - MIR SINE MIR -101 161 89 681 103 93 0 chr10 26308544 26308641 -119280647 + AluSq/x SINE Alu 1 106 -207 2260 93 0 13 chr10 26309854 26310155 -119279133 - AluSq SINE Alu -16 297 1 485 139 25 13 chr10 26310230 26310309 -119278979 + MADE1 DNA Mariner 1 80 0 809 265 31 27 chr10 26310488 26310711 -119278577 + MIR SINE MIR 25 248 -14 1391 109 27 50 chr10 26310748 26310969 -119278319 - AluSg/x SINE Alu 0 310 95 1021 86 17 11 chr10 26311321 26311495 -119277793 + (TTTC)n Simple_repeat Simple_repeat 4 178 0 1489 178 19 11 chr10 26311504 26311841 -119277447 - AluJo SINE Alu 0 375 37 248 275 18 128 chr10 26312375 26312433 -119276855 + L2 LINE L2 2963 3005 -267 2271 107 7 0 chr10 26312433 26312742 -119276546 + AluSx SINE Alu 2 312 0 248 275 18 128 chr10 26312742 26312792 -119276496 + L2 LINE L2 3005 3059 -213 971 131 0 0 chr10 26313179 26313309 -119275979 - FLAM_A SINE Alu 0 133 4 335 181 44 0 chr10 26313503 26313663 -119275625 + (TA)n Simple_repeat Simple_repeat 2 168 0 21 36 0 0 chr10 26315502 26315530 -119273758 + AT_rich Low_complexity Low_complexity 1 28 0 1651 147 11 26 chr10 26316201 26316467 -119272821 + AluJo SINE Alu 24 285 -27 2158 119 0 28 chr10 26317650 26317968 -119271320 + AluSq SINE Alu 1 309 -4 505 202 23 31 chr10 26318078 26318207 -119271081 + L1ME3A LINE L1 6038 6165 -5 252 254 62 54 chr10 26318256 26318386 -119270902 - MIR3 SINE MIR -37 171 41 1256 169 153 8 chr10 26318439 26318577 -119270711 - AluJo SINE Alu -13 299 182 216 0 0 0 chr10 26318577 26318601 -119270687 + (TTA)n Simple_repeat Simple_repeat 1 24 0 1256 169 153 8 chr10 26318601 26318723 -119270565 - AluJo SINE Alu -130 182 1 297 0 0 0 chr10 26318996 26319029 -119270259 + (CA)n Simple_repeat Simple_repeat 2 34 0 212 360 51 23 chr10 26319575 26319750 -119269538 + L2 LINE L2 2173 2352 -962 1593 194 0 20 chr10 26319759 26320052 -119269236 + AluJb SINE Alu 1 287 -25 2073 119 30 0 chr10 26320052 26320347 -119268941 - AluSc SINE Alu -5 304 1 1646 102 16 0 chr10 26320569 26320815 -119268473 - L1MA3 LINE L1 -232 6073 5824 872 209 0 6 chr10 26321783 26321955 -119267333 + AluJo SINE Alu 123 293 -19 2234 115 0 3 chr10 26322045 26322341 -119266947 + AluSx SINE Alu 1 295 -17 931 132 0 183 chr10 26323309 26323544 -119265744 - 7SK RNA RNA -1 192 1 265 293 40 0 chr10 26323670 26323745 -119265543 + MIR SINE MIR 89 166 -96 1375 209 54 7 chr10 26323745 26324022 -119265266 + AluJo SINE Alu 1 290 -22 315 384 20 20 chr10 26324150 26324296 -119264992 + L2 LINE L2 3127 3272 0 2041 129 0 32 chr10 26324601 26324910 -119264378 + AluSx SINE Alu 1 299 -13 180 320 142 41 chr10 26325046 26325243 -119264045 + MIR SINE MIR 37 253 -9 191 260 20 0 chr10 26325577 26325627 -119263661 - MIR SINE MIR -115 147 97 305 217 0 0 chr10 26325639 26325699 -119263589 - AluJb SINE Alu -78 224 165 378 224 112 43 chr10 26325803 26325825 -119263463 - L1MA10 LINE L1 -1 6333 6312 3028 236 32 47 chr10 26325825 26326317 -119262971 - L1ME1 LINE L1 -9 6157 5659 2259 125 0 0 chr10 26326317 26326628 -119262660 + AluY SINE Alu 1 311 0 3028 236 32 47 chr10 26326628 26326719 -119262569 - L1ME1 LINE L1 -507 5659 5568 2250 132 0 0 chr10 26326719 26327030 -119262258 + AluSx SINE Alu 2 312 0 3028 236 32 47 chr10 26327030 26327415 -119261873 - L1ME1 LINE L1 -598 5568 5209 1013 202 149 10 chr10 26327420 26327722 -119261566 + L2 LINE L2 2447 2790 -524 292 320 64 74 chr10 26329622 26329685 -119259603 - MIR SINE MIR -39 223 161 1092 123 0 0 chr10 26329685 26329840 -119259448 + L1PA16 LINE L1 6010 6164 -2 292 320 64 74 chr10 26329840 26329979 -119259309 - MIR SINE MIR -101 161 23 2973 259 118 20 chr10 26330338 26331542 -119257746 + L2 LINE L2 1881 3206 -107 459 274 85 57 chr10 26331722 26331970 -119257318 - MLT1L LTR MaLR -134 481 227 472 300 106 82 chr10 26332110 26332796 -119256492 - HAL1 LINE L1 -1425 1082 380 247 48 24 24 chr10 26333056 26333098 -119256190 + (CATAT)n Simple_repeat Simple_repeat 2 43 0 1609 191 14 0 chr10 26333140 26333445 -119255843 - AluJo SINE Alu 0 309 1 341 280 9 0 chr10 26333485 26333592 -119255696 - MIR3 SINE MIR -10 198 91 490 227 67 0 chr10 26333709 26333859 -119255429 + MIR SINE MIR 103 262 0 4187 106 18 3 chr10 26333953 26335004 -119254284 + L1PA10 LINE L1 4731 5789 -379 189 229 0 0 chr10 26335004 26335052 -119254236 + (TATATG)n Simple_repeat Simple_repeat 3 50 0 2809 108 11 0 chr10 26335052 26335424 -119253864 + L1PA10 LINE L1 5782 6157 -11 2136 120 20 7 chr10 26337098 26337399 -119251889 + THE1B LTR MaLR 1 305 -59 9888 147 27 25 chr10 26337408 26339124 -119250164 + L1P LINE L1 11 1730 -4416 7334 45 9 7 chr10 26339226 26340096 -119249192 + L1PA6 LINE L1 5282 6153 -1 554 82 0 0 chr10 26340096 26340169 -119249119 + THE1B LTR MaLR 292 364 0 510 278 151 28 chr10 26340706 26340918 -119248370 + MIR SINE MIR 25 262 0 1691 123 112 0 chr10 26341001 26341261 -119248027 - AluSx SINE Alu -23 289 1 2265 107 0 7 chr10 26342194 26342493 -119246795 - AluSc SINE Alu -11 298 2 641 200 91 30 chr10 26342606 26342771 -119246517 + MER104 DNA Tc2 6 180 0 215 274 0 27 chr10 26342792 26342865 -119246423 + T-rich Low_complexity Low_complexity 4 74 0 343 158 0 0 chr10 26343054 26343111 -119246177 - Alu SINE Alu 0 302 246 2204 60 0 14 chr10 26343234 26343518 -119245770 + AluY SINE Alu 32 311 0 783 184 0 8 chr10 26344376 26344501 -119244787 + FRAM SINE Alu 23 146 -30 255 103 0 0 chr10 26344504 26344543 -119244745 + (CA)n Simple_repeat Simple_repeat 2 40 0 377 335 33 7 chr10 26345067 26345219 -119244069 + MIR SINE MIR 13 168 -94 7291 233 80 23 chr10 26345433 26348141 -119241147 + L1ME1 LINE L1 2715 5602 -564 2229 124 3 0 chr10 26348141 26348440 -119240848 - AluSx SINE Alu -12 300 1 7291 233 80 23 chr10 26348440 26348655 -119240633 + L1ME1 LINE L1 5602 5803 -363 566 60 0 12 chr10 26348662 26348746 -119240542 + (GAA)n Simple_repeat Simple_repeat 2 84 0 3414 123 35 10 chr10 26348753 26349351 -119239937 + MER4B LTR ERV1 1 779 0 1024 231 86 25 chr10 26349351 26349677 -119239611 + L1ME1 LINE L1 5834 6334 0 1316 221 132 72 chr10 26349978 26350550 -119238738 + MLT1E1 LTR MaLR 1 654 0 1557 180 14 24 chr10 26350737 26351031 -119238257 - AluJo SINE Alu -19 293 3 1246 100 0 0 chr10 26352003 26352163 -119237125 - AluSg/x SINE Alu -10 300 141 1380 192 139 9 chr10 26352769 26353092 -119236196 - MLT1A1 LTR MaLR 0 365 1 357 322 63 21 chr10 26353133 26353276 -119236012 + MLT1K LTR MaLR 190 338 -250 1908 137 3 45 chr10 26353406 26353719 -119235569 - AluJb SINE Alu -12 300 1 266 318 0 0 chr10 26353740 26353803 -119235485 + MLT1K LTR MaLR 518 580 -8 537 311 69 49 chr10 26353834 26354242 -119235046 - L1ME4a LINE L1 -295 5826 5411 1626 201 14 0 chr10 26354663 26354957 -119234331 - AluJo SINE Alu -11 301 4 815 137 0 0 chr10 26354959 26355076 -119234212 - AluJo SINE Alu -176 136 20 2201 140 6 26 chr10 26355442 26355785 -119233503 - MER1B DNA MER1_type -1 336 1 267 118 0 0 chr10 26356157 26356208 -119233080 - LTR66 LTR ERVL -169 441 391 2242 110 10 0 chr10 26356337 26356638 -119232650 + AluSp SINE Alu 1 304 -9 391 282 51 8 chr10 26357031 26357148 -119232140 - MIR SINE MIR -140 122 1 2183 104 7 3 chr10 26357528 26357837 -119231451 - AluSg SINE Alu 0 310 1 348 261 97 37 chr10 26358036 26358170 -119231118 + MIR SINE MIR 3 144 -118 1399 202 52 0 chr10 26358280 26358394 -119230894 + AluJo SINE Alu 1 108 -204 191 30 0 61 chr10 26358394 26358427 -119230861 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 1399 202 52 0 chr10 26358427 26358599 -119230689 + AluJo SINE Alu 108 302 -10 267 31 0 0 chr10 26358599 26358631 -119230657 + (GA)n Simple_repeat Simple_repeat 1 32 0 232 171 0 0 chr10 26359310 26359351 -119229937 - L1 LINE L1 -1503 4643 4603 * 2668 132 76 40 chr10 26359349 26359601 -119229687 + L1MA6 LINE L1 5362 5603 -697 900 172 0 0 chr10 26359601 26359729 -119229559 + FLAM_C SINE Alu 1 128 -5 2668 132 76 40 chr10 26359729 26359975 -119229313 + L1MA6 LINE L1 5603 5878 -422 928 234 19 10 chr10 26359972 26360102 -119229186 - L1MEc LINE L1 -6150 246 112 * 1430 156 116 7 chr10 26360102 26360377 -119228911 - AluJo SINE Alu -7 305 1 928 234 19 10 chr10 26360377 26360455 -119228833 - L1MEc LINE L1 -6284 112 36 1733 121 42 170 chr10 26362462 26362891 -119226397 - MLT1A2 LTR MaLR 0 374 1 185 355 86 0 chr10 26362891 26362984 -119226304 - MIR SINE MIR -99 163 63 300 274 47 9 chr10 26363463 26363569 -119225719 - MIR SINE MIR -50 212 103 1207 192 220 0 chr10 26363715 26363960 -119225328 + AluJo SINE Alu 1 299 -3 2442 98 37 40 chr10 26364228 26364604 -119224684 - THE1C LTR MaLR 0 375 1 2940 9 0 0 chr10 26364618 26364934 -119224354 + AluYb8 SINE Alu 1 316 -2 304 185 0 15 chr10 26365035 26365100 -119224188 + MER5A DNA MER1_type 4 67 -122 1057 142 0 0 chr10 26365104 26365252 -119224036 + FRAM SINE Alu 1 140 -36 212 180 40 0 chr10 26365277 26365327 -119223961 + MER5A DNA MER1_type 61 112 -77 312 143 148 174 chr10 26365472 26365579 -119223709 + MIR SINE MIR 60 161 -101 3914 153 45 17 chr10 26365579 26366183 -119223105 - L1MC1 LINE L1 -1 6332 5705 2105 128 3 0 chr10 26366183 26366472 -119222816 + AluSx SINE Alu 1 290 -22 3914 153 45 17 chr10 26366472 26366561 -119222727 - L1MC1 LINE L1 -628 5705 5620 312 143 148 174 chr10 26366561 26366649 -119222639 + MIR SINE MIR 161 250 -12 385 231 13 0 chr10 26366660 26366738 -119222550 - MER115 DNA AcHobo 0 693 615 606 218 35 2 chr10 26367788 26367950 -119221338 + L1MB8 LINE L1 5625 5792 -378 482 224 87 43 chr10 26367991 26368152 -119221136 + L1MB8 LINE L1 5992 6159 -19 264 30 0 0 chr10 26368152 26368185 -119221103 + (TG)n Simple_repeat Simple_repeat 2 34 0 1793 161 3 7 chr10 26368185 26368470 -119220818 - AluJb SINE Alu -28 284 1 485 246 15 52 chr10 26368488 26368622 -119220666 - FLAM_C SINE Alu -3 130 2 332 362 9 0 chr10 26368645 26368750 -119220538 + MER5A DNA MER1_type 63 168 -21 22 0 0 0 chr10 26368808 26368830 -119220458 + AT_rich Low_complexity Low_complexity 1 22 0 254 208 7 174 chr10 26368974 26369123 -119220165 + MER103 DNA DNA 42 165 -1 2015 147 0 16 chr10 26369755 26370062 -119219226 - AluSx SINE Alu -10 302 1 47 19 0 0 chr10 26370153 26370207 -119219081 + AT_rich Low_complexity Low_complexity 1 54 0 1702 176 3 19 chr10 26370656 26370969 -119218319 - AluJb SINE Alu -4 308 1 836 265 88 42 chr10 26371273 26371619 -119217669 + L2 LINE L2 2358 2686 -627 1881 160 3 10 chr10 26371619 26371925 -119217363 + AluJo SINE Alu 1 304 -8 836 265 88 42 chr10 26371925 26372247 -119217041 + L2 LINE L2 2686 3056 -257 1700 171 3 17 chr10 26372582 26372874 -119216414 - AluJo SINE Alu -24 288 1 365 331 95 6 chr10 26373319 26373488 -119215800 + MIR SINE MIR 52 235 -27 548 251 157 18 chr10 26373633 26373856 -119215432 + MIR SINE MIR 6 259 -3 1840 172 7 13 chr10 26373971 26374273 -119215015 + AluJb SINE Alu 1 300 -12 617 195 16 0 chr10 26376055 26376178 -119213110 + MIR SINE MIR 51 175 -87 1843 142 25 0 chr10 26376218 26376499 -119212789 - AluJb SINE Alu -24 288 1 1697 172 21 0 chr10 26376824 26377150 -119212138 - AluSq SINE Alu 0 332 1 234 253 156 13 chr10 26377245 26377359 -119211929 - L1MC/D LINE L1 -1901 5907 5764 1758 112 0 25 chr10 26377359 26377601 -119211687 - MER46A DNA MER2_type 0 236 1 234 253 156 13 chr10 26377601 26377640 -119211648 - L1MC/D LINE L1 -2044 5764 5732 408 337 97 48 chr10 26377654 26378096 -119211192 + L2 LINE L2 1896 2359 -955 638 232 173 42 chr10 26378214 26378550 -119210738 + L2 LINE L2 2934 3313 0 237 178 0 0 chr10 26379770 26379815 -119209473 + G-rich Low_complexity Low_complexity 2 46 0 27 0 0 0 chr10 26379816 26379843 -119209445 + GC_rich Low_complexity Low_complexity 1 27 0 201 206 0 48 chr10 26379973 26380036 -119209252 + (CCG)n Simple_repeat Simple_repeat 2 61 0 221 267 9 0 chr10 26380274 26380390 -119208898 + (CACCT)n Simple_repeat Simple_repeat 1 117 0 204 241 35 17 chr10 26381311 26381369 -119207919 - MER5A DNA MER1_type -9 180 122 2522 101 122 10 chr10 26382074 26382459 -119206829 - MSTA LTR MaLR 0 428 1 1619 188 0 7 chr10 26382776 26383058 -119206230 + AluJo SINE Alu 1 280 -32 180 0 0 0 chr10 26383068 26383088 -119206200 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1284 135 16 0 chr10 26383246 26383431 -119205857 - L1PA15 LINE L1 0 6165 5978 213 218 0 0 chr10 26383570 26383625 -119205663 + T-rich Low_complexity Low_complexity 1 55 0 2988 130 4 30 chr10 26383627 26383857 -119205431 - L1MA6 LINE L1 0 6300 6066 2085 153 24 12 chr10 26383857 26384190 -119205098 + MER1B DNA MER1_type 1 337 0 2988 130 4 30 chr10 26384190 26384458 -119204830 - L1MA6 LINE L1 -234 6066 5815 931 201 0 34 chr10 26384459 26384578 -119204710 - L1 LINE L1 -1039 5107 4995 2107 117 0 0 chr10 26384578 26384886 -119204402 - AluSx SINE Alu 0 308 1 931 201 0 34 chr10 26384886 26384969 -119204319 - L1 LINE L1 -1151 4995 4911 428 282 0 67 chr10 26386641 26386790 -119202498 + MER103 DNA DNA 16 154 -12 1940 117 3 77 chr10 26387531 26387855 -119201433 - AluSx SINE Alu -12 300 1 982 110 0 22 chr10 26387857 26387993 -119201295 - AluJo/FLAM SINE Alu -169 133 1 514 266 142 19 chr10 26388352 26388619 -119200669 - L1ME4a LINE L1 -248 5873 5574 603 286 28 11 chr10 26388926 26389104 -119200184 + MIR SINE MIR 37 217 -45 751 229 57 17 chr10 26391102 26391277 -119198011 - MER20 DNA MER1_type 0 219 38 1730 179 10 3 chr10 26391884 26392181 -119197107 + AluJb SINE Alu 1 299 -13 286 245 107 68 chr10 26392238 26392386 -119196902 + MIR SINE MIR 36 186 -63 233 342 13 0 chr10 26392733 26392812 -119196476 - L3 LINE CR1 -120 1457 1378 636 254 68 0 chr10 26393845 26394022 -119195266 + MIR SINE MIR 74 262 0 336 175 0 0 chr10 26394264 26394327 -119194961 + (TG)n Simple_repeat Simple_repeat 1 63 0 474 193 0 48 chr10 26394741 26394928 -119194360 + (TG)n Simple_repeat Simple_repeat 1 178 0 787 124 5 38 chr10 26394948 26395133 -119194155 + (TG)n Simple_repeat Simple_repeat 2 180 0 2108 136 0 0 chr10 26395984 26396292 -119192996 - AluSx SINE Alu -4 308 1 1896 146 3 23 chr10 26397530 26397831 -119191457 + AluJo SINE Alu 5 299 -13 2235 100 0 10 chr10 26397839 26398140 -119191148 + AluSx SINE Alu 1 298 -14 384 264 65 68 chr10 26398151 26398433 -119190855 + L1MB8 LINE L1 637 1122 -6341 273 304 39 20 chr10 26398783 26398885 -119190403 + L1MB8 LINE L1 1704 1807 -5656 2078 232 60 30 chr10 26398909 26398962 -119190326 + L1MB8 LINE L1 3407 3457 -4128 1870 122 0 0 chr10 26398962 26399216 -119190072 + AluSq SINE Alu 49 302 -11 2078 232 60 30 chr10 26399216 26399418 -119189870 + L1MB8 LINE L1 3457 3652 -3933 2222 114 0 3 chr10 26399418 26399717 -119189571 + AluSx SINE Alu 13 310 -2 2078 232 60 30 chr10 26399717 26400706 -119188582 + L1MB8 LINE L1 3652 7186 -399 482 235 116 39 chr10 26400711 26400932 -119188356 + L1MB8 LINE L1 7324 7578 -18 246 32 0 0 chr10 26400932 26400963 -119188325 + (TG)n Simple_repeat Simple_repeat 2 32 0 827 156 16 8 chr10 26400963 26401091 -119188197 - AluJb SINE Alu -28 284 156 24 0 0 0 chr10 26401440 26401464 -119187824 + AT_rich Low_complexity Low_complexity 1 24 0 441 0 0 0 chr10 26401966 26402015 -119187273 + (TG)n Simple_repeat Simple_repeat 2 50 0 496 259 26 0 chr10 26403142 26403258 -119186030 + MER45A DNA AcHobo 58 176 -2 1159 173 5 36 chr10 26403408 26403628 -119185660 + AluJo SINE Alu 81 293 -19 295 176 0 27 chr10 26403628 26403702 -119185586 + GA-rich Low_complexity Low_complexity 3 74 0 192 77 0 0 chr10 26403715 26403741 -119185547 + (GAAAA)n Simple_repeat Simple_repeat 5 30 0 21 0 0 0 chr10 26405122 26405143 -119184145 + AT_rich Low_complexity Low_complexity 1 21 0 379 235 0 31 chr10 26405150 26405248 -119184040 + L1MA10 LINE L1 6240 6334 0 1268 199 8 4 chr10 26405335 26405571 -119183717 + AluJb SINE Alu 49 285 -27 297 211 79 13 chr10 26405728 26405804 -119183484 + MIR SINE MIR 103 183 -79 2278 68 0 0 chr10 26406281 26406599 -119182689 - AluY SINE Alu 0 318 1 224 95 48 16 chr10 26406833 26406896 -119182392 + (TA)n Simple_repeat Simple_repeat 2 66 0 5525 34 8 0 chr10 26407514 26408131 -119181157 + L1PA4 LINE L1 5531 6152 -3 242 317 250 0 chr10 26408296 26408460 -119180828 + L3 LINE CR1 400 604 -973 2689 118 17 0 chr10 26408481 26408837 -119180451 + THE1B LTR MaLR 1 362 -2 3280 95 0 0 chr10 26408839 26409269 -119180019 + THE1B-int LTR MaLR 1 430 -1150 6493 20 0 0 chr10 26409309 26410005 -119179283 - L1PA3 LINE L1 0 6155 5460 271 295 225 0 chr10 26410105 26410234 -119179054 + MIR SINE MIR 49 206 -56 2242 113 7 0 chr10 26410249 26410551 -119178737 + AluSx SINE Alu 1 304 -8 241 286 34 122 chr10 26411013 26411339 -119177949 - L3 LINE CR1 -37 1540 1192 255 329 0 0 chr10 26411437 26411519 -119177769 + (CA)n Simple_repeat Simple_repeat 2 83 0 1953 120 16 35 chr10 26412630 26412946 -119176342 - AluSx SINE Alu -2 310 1 236 233 14 0 chr10 26414565 26414638 -119174650 + GA-rich Low_complexity Low_complexity 3 76 0 229 292 0 5 chr10 26415404 26415534 -119173754 + MIR SINE MIR 53 236 -26 847 152 0 0 chr10 26415707 26415832 -119173456 - FLAM_C SINE Alu -18 125 1 1191 274 87 19 chr10 26416078 26416457 -119172831 - MLT1I LTR MaLR -4 405 1 501 267 124 40 chr10 26416460 26416685 -119172603 + L2 LINE L2 3020 3263 -50 3083 135 45 97 chr10 26416802 26417462 -119171826 - LTR1 LTR ERV1 0 785 160 1935 125 11 21 chr10 26417743 26418030 -119171258 - AluSx SINE Alu -26 286 3 351 242 21 21 chr10 26419454 26419549 -119169739 + L2 LINE L2 3167 3261 -11 205 162 0 0 chr10 26419555 26419592 -119169696 + (CAGG)n Simple_repeat Simple_repeat 2 38 0 591 15 0 0 chr10 26420116 26420184 -119169104 + (TA)n Simple_repeat Simple_repeat 2 69 0 33 73 0 0 chr10 26420361 26420429 -119168859 + AT_rich Low_complexity Low_complexity 1 68 0 1032 133 0 0 chr10 26420429 26420609 -119168679 + (TA)n Simple_repeat Simple_repeat 1 180 0 2017 143 0 10 chr10 26420611 26420905 -119168383 - AluSx SINE Alu -21 291 1 241 277 213 0 chr10 26420935 26421029 -119168259 - L2 LINE L2 -1 3312 3199 230 158 0 0 chr10 26421170 26421208 -119168080 - LTR33 LTR ERVL -4 517 480 523 140 21 11 chr10 26421227 26421320 -119167968 - AluJ/FRAM SINE Alu 0 312 219 842 130 0 15 chr10 26421344 26421475 -119167813 - FLAM_C SINE Alu 0 143 15 591 246 34 29 chr10 26421482 26421657 -119167631 - LTR33 LTR ERVL -51 470 295 868 20 20 0 chr10 26422080 26422182 -119167106 - L1P LINE L1 -899 5247 5144 2338 39 0 0 chr10 26422182 26422463 -119166825 + L1P LINE L1 4862 5142 -1004 8101 114 15 3 chr10 26422472 26423613 -119165675 + THE1B-int LTR MaLR 427 1580 0 2772 101 8 16 chr10 26423613 26423980 -119165308 + THE1B LTR MaLR 1 364 0 540 276 291 21 chr10 26423986 26424323 -119164965 + L3 LINE CR1 652 1079 -498 2119 121 3 7 chr10 26424389 26424696 -119164592 + AluSq SINE Alu 1 306 -7 198 351 0 0 chr10 26425169 26425226 -119164062 + L2 LINE L2 3215 3271 -1 237 301 68 0 chr10 26425606 26425679 -119163609 - MIR3 SINE MIR -7 201 124 181 384 0 47 chr10 26426025 26426111 -119163177 - MIR3 SINE MIR -14 194 113 23 33 0 0 chr10 26426481 26426511 -119162777 + AT_rich Low_complexity Low_complexity 1 30 0 822 229 18 70 chr10 26429099 26429326 -119159962 - MER58A DNA MER1_type 0 224 10 180 0 0 0 chr10 26429389 26429409 -119159879 + (T)n Simple_repeat Simple_repeat 1 20 0 1774 147 0 4 chr10 26429726 26429998 -119159290 + AluJb SINE Alu 27 297 -15 852 154 28 0 chr10 26430046 26430189 -119159099 - MER2 DNA MER2_type -144 201 55 292 339 141 17 chr10 26430209 26430507 -119158781 - L3 LINE CR1 -872 705 371 216 130 0 0 chr10 26430747 26430793 -119158495 + (TA)n Simple_repeat Simple_repeat 2 47 0 1684 141 99 0 chr10 26431004 26431266 -119158022 + AluJb SINE Alu 11 298 -14 1719 144 0 0 chr10 26436445 26436688 -119152600 - AluSx SINE Alu -69 243 1 23 54 0 0 chr10 26437334 26437371 -119151917 + AT_rich Low_complexity Low_complexity 1 37 0 2048 119 0 10 chr10 26437587 26437897 -119151391 + AluSx SINE Alu 6 312 0 1223 102 0 6 chr10 26437898 26438064 -119151224 + AluSp SINE Alu 135 299 -14 1602 121 158 4 chr10 26438116 26438381 -119150907 + AluSx SINE Alu 1 306 -6 235 326 21 57 chr10 26438543 26438684 -119150604 - L2 LINE L2 -212 3060 2925 456 348 103 32 chr10 26438711 26439217 -119150071 + L2 LINE L2 1291 1832 -1482 455 291 85 0 chr10 26439397 26439596 -119149692 - L1ME3A LINE L1 -213 5957 5742 1575 242 48 88 chr10 26440538 26441310 -119147978 - HAL1 LINE L1 -567 1940 1200 2065 130 7 0 chr10 26441346 26441638 -119147650 + AluSx SINE Alu 1 294 -18 574 275 40 7 chr10 26441690 26441839 -119147449 + MLT1H LTR MaLR 75 228 -321 441 229 136 0 chr10 26441973 26442091 -119147197 + MLT1H LTR MaLR 422 555 0 1104 283 104 82 chr10 26442092 26442351 -119146937 - HAL1 LINE L1 -1305 1202 950 740 206 0 0 chr10 26442351 26442482 -119146806 - FLAM_C SINE Alu -1 132 2 1104 283 104 82 chr10 26442482 26443338 -119145950 - HAL1 LINE L1 -1557 950 62 466 292 41 23 chr10 26443349 26443520 -119145768 + LTR67 LTR ERVL 384 557 0 1635 161 62 0 chr10 26443647 26443938 -119145350 + AluJo SINE Alu 1 309 -3 315 255 117 7 chr10 26443938 26444083 -119145205 - MER103 DNA DNA -3 163 3 207 100 0 0 chr10 26444306 26444336 -119144952 + (TATG)n Simple_repeat Simple_repeat 4 33 0 * 409 62 31 0 chr10 26444335 26444400 -119144888 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 536 224 109 0 chr10 26444522 26444687 -119144601 - MER63 DNA MER1_type -767 294 112 2234 118 0 0 chr10 26445410 26445707 -119143581 + AluSp SINE Alu 4 300 -13 2121 128 45 31 chr10 26446243 26446602 -119142686 + THE1B LTR MaLR 1 364 0 313 301 201 24 chr10 26447299 26447548 -119141740 - L2 LINE L2 -546 2768 2476 1877 141 3 7 chr10 26449432 26449722 -119139566 + AluJb SINE Alu 1 289 -23 1045 275 75 33 chr10 26449817 26449995 -119139293 - MLT1H LTR MaLR 0 595 426 655 11 122 0 chr10 26449995 26450085 -119139203 + L1PA5 LINE L1 6054 6154 0 1045 275 75 33 chr10 26450085 26450490 -119138798 - MLT1H LTR MaLR -169 426 1 2320 54 13 10 chr10 26450506 26450804 -119138484 - AluY SINE Alu -12 299 1 478 311 80 0 chr10 26451035 26451321 -119137967 - L1ME4a LINE L1 -224 5897 5589 1496 242 34 49 chr10 26451346 26451933 -119137355 - L1MDa LINE L1 -4704 1836 1259 * 1736 219 63 34 chr10 26451931 26452438 -119136850 + L1MC4 LINE L1 7521 8042 0 2029 96 0 22 chr10 26452458 26452729 -119136559 - AluSq SINE Alu -48 265 1 760 182 44 19 chr10 26452842 26453001 -119136287 + FRAM SINE Alu 1 163 -13 588 291 76 0 chr10 26453020 26453230 -119136058 + L1MC4 LINE L1 7639 7864 -178 22 0 0 0 chr10 26453512 26453534 -119135754 + AT_rich Low_complexity Low_complexity 1 22 0 1091 301 54 32 chr10 26453607 26454425 -119134863 - L1MEc LINE L1 -4901 1360 525 1907 158 0 0 chr10 26454521 26454827 -119134461 - AluJo SINE Alu 0 310 5 917 316 18 34 chr10 26454937 26455380 -119133908 - L1MEc LINE L1 -5625 445 10 571 257 57 23 chr10 26456629 26456804 -119132484 + MIR SINE MIR 31 211 -51 655 268 110 13 chr10 26459130 26459358 -119129930 + MIR SINE MIR 5 254 -8 317 282 0 0 chr10 26459390 26459468 -119129820 - L2 LINE L2 -14 3299 3222 2283 105 14 0 chr10 26459640 26459936 -119129352 + AluSx SINE Alu 1 300 -12 22 0 0 0 chr10 26459945 26459967 -119129321 + AT_rich Low_complexity Low_complexity 1 22 0 2457 127 61 20 chr10 26459994 26460403 -119128885 - MSTB LTR MaLR 0 426 1 2554 101 20 0 chr10 26460423 26460780 -119128508 - THE1B LTR MaLR 0 364 1 2662 128 31 0 chr10 26461475 26461888 -119127400 - MSTA LTR MaLR -2 426 1 23 0 0 0 chr10 26462510 26462533 -119126755 + AT_rich Low_complexity Low_complexity 1 23 0 1552 141 51 33 chr10 26462630 26462906 -119126382 + AluJo SINE Alu 1 281 -31 2138 112 31 0 chr10 26462906 26463199 -119126089 - AluSq SINE Alu -6 307 5 2120 151 25 3 chr10 26463293 26463685 -119125603 - L1MA7 LINE L1 0 6291 5891 370 300 0 8 chr10 26463803 26463933 -119125355 - L1ME LINE L1 -336 5785 5657 23 0 0 0 chr10 26463972 26463995 -119125293 + AT_rich Low_complexity Low_complexity 1 23 0 239 196 0 0 chr10 26464195 26464241 -119125047 - L1ME4a LINE L1 -3 6118 6073 2256 107 0 3 chr10 26464273 26464572 -119124716 + AluSq SINE Alu 1 298 -15 1007 64 6 19 chr10 26464582 26464738 -119124550 + (TTTC)n Simple_repeat Simple_repeat 2 155 0 353 325 22 51 chr10 26464777 26464818 -119124470 - MIR SINE MIR -62 146 105 1751 168 28 0 chr10 26464818 26465109 -119124179 - AluJo SINE Alu -13 299 1 353 325 22 51 chr10 26465109 26465264 -119124024 - MIR SINE MIR -103 105 4 198 0 0 0 chr10 26465680 26465702 -119123586 + (A)n Simple_repeat Simple_repeat 1 22 0 233 214 0 0 chr10 26466120 26466162 -119123126 + (CAT)n Simple_repeat Simple_repeat 1 42 0 571 259 30 8 chr10 26466216 26466347 -119122941 - MIR SINE MIR -108 154 21 7884 13 0 0 chr10 26466980 26468255 -119121033 + L1PA2 LINE L1 4879 6155 0 2265 110 0 3 chr10 26473848 26474158 -119115130 + AluSx SINE Alu 1 309 -3 771 107 42 0 chr10 26474158 26474375 -119114913 + GA-rich Low_complexity Low_complexity 1 226 0 474 18 0 0 chr10 26474377 26474432 -119114856 + (GAAA)n Simple_repeat Simple_repeat 2 56 0 1999 113 36 0 chr10 26475056 26475331 -119113957 - AluSx SINE Alu -27 285 1 189 390 25 25 chr10 26475543 26475661 -119113627 + L2 LINE L2 3137 3254 -18 1959 135 0 23 chr10 26475935 26476239 -119113049 - AluSx SINE Alu -15 297 1 197 181 29 67 chr10 26477468 26477573 -119111715 + A-rich Low_complexity Low_complexity 2 102 0 189 147 0 0 chr10 26477605 26477639 -119111649 + (GGGA)n Simple_repeat Simple_repeat 1 34 0 306 256 70 0 chr10 26478537 26478623 -119110665 + MIR SINE MIR 98 189 -73 254 331 71 52 chr10 26478863 26479017 -119110271 - L2 LINE L2 -254 3018 2862 2433 77 0 10 chr10 26479023 26479334 -119109954 - AluY SINE Alu -3 308 1 439 246 70 35 chr10 26479360 26479502 -119109786 - L2 LINE L2 -13 3300 3154 2360 96 0 0 chr10 26479562 26479864 -119109424 + AluY SINE Alu 1 302 -9 187 260 100 0 chr10 26479899 26479949 -119109339 - MIR SINE MIR -112 150 96 351 194 43 115 chr10 26480081 26480220 -119109068 + L1MA9 LINE L1 6122 6250 -62 2441 174 42 10 chr10 26481420 26481920 -119107368 - Charlie1b DNA MER1_type -7 516 1 246 368 120 0 chr10 26482293 26482410 -119106878 + L3b LINE CR1 1398 1528 -55 1089 329 94 50 chr10 26484701 26485614 -119103674 - L3 LINE CR1 -80 1497 545 454 294 165 7 chr10 26485880 26486082 -119103206 + MIR SINE MIR 10 241 -21 2252 96 0 13 chr10 26486506 26486808 -119102480 - AluY SINE Alu -13 298 1 270 302 94 20 chr10 26487011 26487213 -119102075 - L1ME LINE L1 -230 5891 5675 26 30 0 0 chr10 26487214 26487247 -119102041 + AT_rich Low_complexity Low_complexity 1 33 0 1369 150 0 10 chr10 26487273 26487480 -119101808 - AluJo SINE Alu -21 291 87 256 191 0 0 chr10 26487864 26487906 -119101382 + L2 LINE L2 3184 3225 -47 240 241 0 0 chr10 26488622 26488676 -119100612 + L3 LINE CR1 1215 1268 -309 600 219 60 13 chr10 26489250 26489401 -119099887 + MER3 DNA MER1_type 48 205 -4 647 279 55 45 chr10 26489917 26490225 -119099063 + Charlie7 DNA MER1_type 54 364 -2248 * 2278 226 139 34 chr10 26490220 26491241 -119098047 + Charlie7 DNA MER1_type 1474 2601 -11 25 51 0 0 chr10 26491307 26491346 -119097942 + AT_rich Low_complexity Low_complexity 1 39 0 325 163 272 0 chr10 26494685 26494777 -119094511 + L2 LINE L2 3196 3312 -1 21 0 0 0 chr10 26495622 26495643 -119093645 + AT_rich Low_complexity Low_complexity 1 21 0 544 297 64 39 chr10 26496515 26496798 -119092490 - L2 LINE L2 -1 3312 3023 326 189 95 0 chr10 26498027 26498101 -119091187 - MER69 DNA AcHobo -7 2519 2439 * 1087 291 123 5 chr10 26498098 26498497 -119090791 - MER69 DNA AcHobo -2055 471 26 245 272 170 14 chr10 26499490 26499637 -119089651 + MLT1-int LTR MaLR 290 459 -912 2125 106 14 0 chr10 26499714 26499997 -119089291 - AluSx SINE Alu -25 287 1 2548 152 8 15 chr10 26500007 26500480 -119088808 - L1MB2 LINE L1 -2 6169 5700 973 216 67 24 chr10 26500554 26500586 -119088702 + L1MD3 LINE L1 7713 7742 -253 2277 139 32 5 chr10 26500586 26500966 -119088322 - MLT1B LTR MaLR 0 390 1 973 216 67 24 chr10 26500966 26501188 -119088100 + L1MD3 LINE L1 7742 7978 -17 2408 69 0 0 chr10 26501256 26501547 -119087741 + AluY SINE Alu 1 291 -20 256 250 144 28 chr10 26501754 26501934 -119087354 + L1ME4a LINE L1 3438 3638 -2508 864 279 143 48 chr10 26502136 26502623 -119086665 + L1ME4a LINE L1 3870 4309 -1917 2242 100 10 0 chr10 26502623 26502922 -119086366 + AluSq SINE Alu 4 305 -8 864 279 143 48 chr10 26502922 26503031 -119086257 + L1ME4a LINE L1 4309 4406 -1820 2247 140 109 0 chr10 26503031 26503417 -119085871 + MSTA LTR MaLR 1 428 0 864 279 143 48 chr10 26503417 26503879 -119085409 + L1ME4a LINE L1 4406 4823 -1403 1428 162 57 153 chr10 26503879 26504317 -119084971 + MSTD LTR MaLR 1 396 0 864 279 143 48 chr10 26504317 26504396 -119084892 + L1ME4a LINE L1 4823 4893 -1333 2289 99 0 0 chr10 26504396 26504698 -119084590 - AluSc SINE Alu -7 302 1 864 279 143 48 chr10 26504698 26505233 -119084055 + L1ME4a LINE L1 4893 5707 -519 21 0 0 0 chr10 26505890 26505911 -119083377 + AT_rich Low_complexity Low_complexity 1 21 0 2311 96 3 22 chr10 26506397 26506711 -119082577 + AluSg SINE Alu 1 308 -2 423 0 0 0 chr10 26506944 26506991 -119082297 + (CA)n Simple_repeat Simple_repeat 2 48 0 2173 147 0 12 chr10 26507826 26508166 -119081122 + MER1B DNA MER1_type 1 336 -1 1356 210 83 35 chr10 26508275 26508698 -119080590 + LTR40c LTR ERVL 1 443 -22 242 222 104 52 chr10 26508962 26509097 -119080191 + L1ME4a LINE L1 5978 6119 -2 2528 47 3 7 chr10 26509263 26509561 -119079727 + AluY SINE Alu 1 297 -14 2196 214 16 87 chr10 26509581 26510317 -119078971 + L1PA15 LINE L1 2612 3282 -2864 2225 123 33 36 chr10 26510317 26510682 -119078606 - THE1B LTR MaLR 0 364 1 2196 214 16 87 chr10 26510682 26510781 -119078507 + L1PA15 LINE L1 3282 3387 -2759 13486 52 2 3 chr10 26510796 26513291 -119075997 + L1PA5 LINE L1 3652 6147 -7 8920 174 18 38 chr10 26513283 26515690 -119073598 + L1PA15 LINE L1 3387 5786 -379 * 1644 136 86 44 chr10 26515690 26516050 -119073238 - THE1C LTR MaLR 0 375 1 8920 174 18 38 chr10 26516050 26516423 -119072865 + L1PA15 LINE L1 5786 6165 0 382 300 55 61 chr10 26519010 26519303 -119069985 + HAL1 LINE L1 811 1101 -1406 978 279 142 22 chr10 26519326 26519995 -119069293 + HAL1 LINE L1 1169 1917 -590 2157 126 3 3 chr10 26520044 26520354 -119068934 + AluSx SINE Alu 1 310 -2 2109 125 0 0 chr10 26521005 26521293 -119067995 - AluSx SINE Alu -24 288 1 943 276 54 43 chr10 26522001 26522446 -119066842 + L2 LINE L2 2827 3276 -37 1507 134 127 14 chr10 26522454 26522730 -119066558 - MER47A DNA MER2_type 0 366 60 256 28 0 0 chr10 26522777 26522813 -119066475 - L1PA2 LINE L1 -5 6150 6115 240 250 0 0 chr10 26522813 26522865 -119066423 - MER47A DNA MER2_type -308 58 7 542 309 81 13 chr10 26522875 26523111 -119066177 - MIR SINE MIR -10 252 1 1998 156 16 24 chr10 26523146 26523524 -119065764 - THE1C LTR MaLR 0 375 1 247 389 54 6 chr10 26523981 26524148 -119065140 + MER5A DNA MER1_type 8 182 -7 313 234 85 11 chr10 26524258 26524352 -119064936 + MIR3 SINE MIR 100 200 -8 1856 161 7 0 chr10 26524919 26525223 -119064065 + AluJb SINE Alu 1 306 0 399 41 0 0 chr10 26525666 26525715 -119063573 + (CA)n Simple_repeat Simple_repeat 2 50 0 17961 43 1 29 chr10 26525752 26528285 -119061003 - L1PA5 LINE L1 -1 6153 3754 2469 72 0 3 chr10 26528285 26528589 -119060699 + AluY SINE Alu 1 303 -8 17961 43 1 29 chr10 26528589 26529696 -119059592 - L1PA5 LINE L1 -2400 3754 2617 263 30 0 0 chr10 26529695 26529728 -119059560 + L1PA5 LINE L1 2578 2610 -3536 * 2251 64 50 0 chr10 26529728 26530008 -119059280 - AluY SINE Alu -17 294 1 232 312 11 11 chr10 26530244 26530337 -119058951 + (CATATA)n Simple_repeat Simple_repeat 4 96 0 1271 194 9 0 chr10 26530407 26530624 -119058664 + MER20 DNA MER1_type 1 219 0 918 178 32 42 chr10 26531105 26531360 -119057928 + AluJo SINE Alu 2 304 -8 758 205 35 6 chr10 26531492 26531663 -119057625 - MER104 DNA MER2_type -1 179 4 1837 174 0 0 chr10 26533532 26533830 -119055458 + AluJb SINE Alu 1 298 -14 223 287 191 7 chr10 26534271 26534407 -119054881 - L3 LINE CR1 -107 1470 1310 349 257 182 7 chr10 26534508 26534656 -119054632 - L2 LINE L2 0 3313 3140 1413 148 27 0 chr10 26534851 26535074 -119054214 - AluJo SINE Alu -83 229 1 2029 134 3 10 chr10 26536575 26536865 -119052423 - AluSx SINE Alu -22 290 3 3127 181 36 34 chr10 26537052 26537342 -119051946 - LTR39 LTR ERV1 0 783 495 2152 109 10 0 chr10 26537342 26537636 -119051652 - AluSq SINE Alu -16 297 1 3127 181 36 34 chr10 26537636 26537985 -119051303 - LTR39 LTR ERV1 -288 495 143 304 107 107 0 chr10 26538038 26538094 -119051194 - L1PA10 LINE L1 -1 6167 6106 889 123 7 45 chr10 26538102 26538256 -119051032 - LTR39 LTR ERV1 -633 150 3 346 323 31 8 chr10 26538258 26538388 -119050900 + L3 LINE CR1 1438 1570 -7 2717 126 41 7 chr10 26538720 26539134 -119050154 - MSTA LTR MaLR 0 428 1 1969 131 34 0 chr10 26539210 26539508 -119049780 + AluSx SINE Alu 1 308 -4 846 125 8 16 chr10 26539863 26539991 -119049297 + FLAM_C SINE Alu 5 131 -2 242 336 89 53 chr10 26540606 26540926 -119048362 - L2 LINE L2 -16 3256 2949 1710 171 17 14 chr10 26540926 26541219 -119048069 + AluJo SINE Alu 1 294 -18 2153 111 3 7 chr10 26541219 26541525 -119047763 + AluSc SINE Alu 1 305 -4 242 336 89 53 chr10 26541525 26541619 -119047669 - L2 LINE L2 -322 2950 2826 275 319 0 0 chr10 26542428 26542500 -119046788 - L2 LINE L2 -8 3305 3234 1944 152 0 20 chr10 26543362 26543664 -119045624 + AluJo SINE Alu 1 296 -16 882 204 11 34 chr10 26544525 26544701 -119044587 - FRAM SINE Alu -4 172 1 251 307 0 40 chr10 26544763 26544838 -119044450 - L2 LINE L2 -39 3274 3203 1915 102 4 0 chr10 26544944 26545198 -119044090 + AluSq SINE Alu 1 255 -58 184 352 116 36 chr10 26545554 26545855 -119043433 + L3b LINE CR1 1109 1433 -150 189 0 0 0 chr10 26546130 26546151 -119043137 + (T)n Simple_repeat Simple_repeat 1 21 0 200 199 0 4 chr10 26546620 26546664 -119042624 + MIR SINE MIR 114 157 -51 1142 120 0 24 chr10 26546780 26546947 -119042341 - AluSg/x SINE Alu -11 301 139 398 241 52 108 chr10 26547006 26547218 -119042070 - MIR SINE MIR 0 262 63 2508 138 96 5 chr10 26547410 26547836 -119041452 + MER4C LTR ERV1 1 465 0 483 215 176 71 chr10 26547930 26548188 -119041100 + LTR16A1 LTR ERVL 82 386 -71 2081 137 3 0 chr10 26548188 26548487 -119040801 - AluSx SINE Alu -12 300 1 483 215 176 71 chr10 26548487 26548568 -119040720 + LTR16A1 LTR ERVL 386 457 0 1898 152 118 0 chr10 26548855 26549178 -119040110 - MER46B DNA MER2_type 0 236 1 264 30 0 0 chr10 26549594 26549627 -119039661 + (CAAA)n Simple_repeat Simple_repeat 1 33 0 23 33 0 0 chr10 26550351 26550381 -119038907 + AT_rich Low_complexity Low_complexity 1 30 0 525 246 89 13 chr10 26550486 26550710 -119038578 - L1ME4a LINE L1 -190 5931 5691 1748 194 0 0 chr10 26550729 26551028 -119038260 - AluJb SINE Alu -13 299 1 541 184 20 116 chr10 26551087 26551234 -119038054 + FLAM_A SINE Alu 1 133 0 1674 148 151 42 chr10 26552203 26552560 -119036728 - MSTD LTR MaLR 0 396 1 292 340 0 10 chr10 26552799 26552899 -119036389 + MIR3 SINE MIR 89 187 -21 359 273 144 15 chr10 26554515 26554647 -119034641 + MER115 DNA AcHobo 18 166 -527 799 239 17 6 chr10 26554647 26554827 -119034461 + MER5A DNA MER1_type 3 184 -5 392 245 21 11 chr10 26554836 26554930 -119034358 + MER115 DNA AcHobo 159 253 -440 688 213 65 7 chr10 26555037 26555192 -119034096 + MER115 DNA AcHobo 530 693 0 282 116 0 0 chr10 26555207 26555250 -119034038 + (TTCA)n Simple_repeat Simple_repeat 3 45 0 1386 171 92 39 chr10 26555250 26555607 -119033681 - L1M4b LINE L1 -5246 1613 1238 860 230 138 0 chr10 26555629 26555846 -119033442 - L1M4b LINE L1 -6602 257 11 21 0 0 0 chr10 26555855 26555876 -119033412 + AT_rich Low_complexity Low_complexity 1 21 0 2100 121 7 0 chr10 26555882 26556196 -119033092 + AluSx SINE Alu 1 316 0 429 273 0 0 chr10 26556199 26556276 -119033012 - L2 LINE L2 -22 3250 3174 1905 135 16 29 chr10 26557034 26557346 -119031942 + AluSx SINE Alu 1 308 -4 21 0 0 0 chr10 26557789 26557810 -119031478 + AT_rich Low_complexity Low_complexity 1 21 0 688 301 19 120 chr10 26557922 26558001 -119031287 - L2 LINE L2 -1 3271 3186 2146 118 0 7 chr10 26558001 26558298 -119030990 + AluSx SINE Alu 1 295 -17 688 301 19 120 chr10 26558298 26558643 -119030645 - L2 LINE L2 -86 3186 2890 1042 163 0 0 chr10 26559022 26559169 -119030119 + FRAM SINE Alu 1 147 -19 21698 151 31 15 chr10 26559221 26559770 -119029518 - L1MA2 LINE L1 0 7723 7184 2297 91 3 3 chr10 26559770 26560077 -119029211 - AluSg SINE Alu -3 307 1 21698 151 31 15 chr10 26560077 26562043 -119027245 - L1MA2 LINE L1 -539 7184 5251 1985 149 0 0 chr10 26562043 26562325 -119026963 - AluJb SINE Alu -30 282 1 21698 151 31 15 chr10 26562325 26563697 -119025591 - L1MA2 LINE L1 -2472 5251 3903 1790 205 0 0 chr10 26563697 26564009 -119025279 - AluJb SINE Alu 0 312 1 21698 151 31 15 chr10 26564009 26567710 -119021578 - L1MA2 LINE L1 -3820 3903 12 230 294 0 0 chr10 26568279 26568330 -119020958 + polypurine Low_complexity Low_complexity 1 51 0 1940 158 6 13 chr10 26568586 26568897 -119020391 + AluJo SINE Alu 1 309 -3 281 255 75 0 chr10 26569120 26569226 -119020062 - MER97b DNA MER1_type? -194 859 746 963 73 32 0 chr10 26569227 26569382 -119019906 + AluSc SINE Alu 156 314 0 367 141 52 104 chr10 26569382 26569517 -119019771 - MER97b DNA MER1_type? -328 725 598 5899 118 21 14 chr10 26569517 26570428 -119018860 - L1MA4A LINE L1 -1 6302 5254 1480 176 0 11 chr10 26570475 26570742 -119018546 + AluJo SINE Alu 17 280 -32 194 79 0 26 chr10 26570747 26570785 -119018503 + (CAAA)n Simple_repeat Simple_repeat 2 38 0 2406 225 54 14 chr10 26570790 26571346 -119017942 - MER97a DNA MER1_type? -316 578 1 300 286 67 17 chr10 26572703 26572822 -119016466 + MIR3 SINE MIR 69 193 -15 1323 66 6 12 chr10 26573376 26573543 -119015745 + L1PA10 LINE L1 5994 6159 -9 1628 170 64 7 chr10 26574104 26574386 -119014902 - LTR32 LTR ERVL 0 471 174 2125 128 3 10 chr10 26574524 26574836 -119014452 + AluSx SINE Alu 1 310 -2 2154 142 0 0 chr10 26577500 26577842 -119011446 - AluSx SINE Alu 0 342 1 274 342 70 9 chr10 26578072 26578186 -119011102 - MIR SINE MIR -113 149 29 315 213 176 9 chr10 26578324 26578432 -119010856 + MER5B DNA MER1_type 46 171 -7 4801 175 52 13 chr10 26578868 26579737 -119009551 + MER4D LTR ERV1 1 903 0 1793 139 0 77 chr10 26579946 26580051 -119009237 + AluJb SINE Alu 1 112 -200 4437 115 24 6 chr10 26580051 26580675 -119008613 - MER41B LTR ERV1 0 635 1 1793 139 0 77 chr10 26580675 26580721 -119008567 + AluJb SINE Alu 112 160 -152 2157 111 3 7 chr10 26580721 26581027 -119008261 + AluSg SINE Alu 1 305 -5 1793 139 0 77 chr10 26581027 26581212 -119008076 + AluJb SINE Alu 160 312 0 1878 164 3 3 chr10 26581338 26581649 -119007639 - AluSx SINE Alu -1 311 1 1959 144 3 7 chr10 26581796 26582095 -119007193 + AluSx SINE Alu 1 298 -14 1665 166 26 29 chr10 26582307 26582614 -119006674 - AluJo SINE Alu -6 306 1 326 224 0 0 chr10 26582933 26583000 -119006288 + MIR SINE MIR 89 155 -107 985 267 32 4 chr10 26583098 26583349 -119005939 - MIR SINE MIR -2 260 3 988 217 75 5 chr10 26584675 26584887 -119004401 - MIR SINE MIR 0 262 36 2192 122 3 0 chr10 26585154 26585458 -119003830 - AluSx SINE Alu -7 305 1 187 203 31 16 chr10 26585686 26585750 -119003538 + CT-rich Low_complexity Low_complexity 3 67 0 353 115 0 0 chr10 26585873 26585925 -119003363 + Alu SINE Alu 250 301 -1 346 356 22 0 chr10 26585975 26586110 -119003178 - MIR3 SINE MIR -41 167 30 223 286 200 9 chr10 26586929 26587034 -119002254 - MIR3 SINE MIR -40 168 44 291 319 265 15 chr10 26587200 26587404 -119001884 + MIR SINE MIR 2 256 -6 * 331 326 30 30 chr10 26587399 26587534 -119001754 + MIR3 SINE MIR 50 184 -24 22 80 0 0 chr10 26588143 26588193 -119001095 + AT_rich Low_complexity Low_complexity 1 50 0 239 366 79 10 chr10 26588733 26588834 -119000454 + MIR SINE MIR 33 116 -92 845 270 5 5 chr10 26589375 26589575 -118999713 + MIR SINE MIR 49 248 -14 561 245 41 20 chr10 26589933 26590080 -118999208 - MIR3 SINE MIR -25 183 34 22 0 0 0 chr10 26590147 26590169 -118999119 + AT_rich Low_complexity Low_complexity 1 22 0 28 0 0 0 chr10 26593037 26593065 -118996223 + GC_rich Low_complexity Low_complexity 1 28 0 574 240 0 8 chr10 26594046 26594171 -118995117 + L2 LINE L2 3190 3313 0 238 346 10 50 chr10 26594695 26594796 -118994492 + MIR SINE MIR 28 124 -84 1475 148 25 44 chr10 26595010 26595327 -118993961 - MER33 DNA MER1_type 0 324 14 186 71 0 0 chr10 26595547 26595575 -118993713 + (CA)n Simple_repeat Simple_repeat 2 29 0 693 252 78 71 chr10 26595621 26595930 -118993358 - L2 LINE L2 0 3313 3003 285 333 56 40 chr10 26596645 26596771 -118992517 + MIR SINE MIR 20 147 -61 290 234 186 10 chr10 26597153 26597257 -118992031 - MER5A DNA MER1_type -72 106 1 180 0 0 0 chr10 26597318 26597338 -118991950 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 471 278 86 6 chr10 26597416 26597578 -118991710 - MIR SINE MIR -11 251 77 892 215 32 16 chr10 26597608 26597794 -118991494 - MER5A DNA MER1_type 0 189 1 4159 119 35 30 chr10 26598802 26599439 -118989849 - MER51C LTR ERV1 0 640 1 2650 121 35 42 chr10 26599550 26599906 -118989382 + L1MA8 LINE L1 5838 6192 -99 1906 159 0 3 chr10 26599906 26600195 -118989093 + AluSx SINE Alu 9 296 -16 2650 121 35 42 chr10 26600195 26600292 -118988996 + L1MA8 LINE L1 6192 6288 -3 796 207 0 0 chr10 26600446 26600586 -118988702 - FLAM_C SINE Alu -2 141 2 402 147 0 0 chr10 26600913 26600981 -118988307 + (TCC)n Simple_repeat Simple_repeat 3 70 0 752 233 0 0 chr10 26601628 26601761 -118987527 + FLAM_A SINE Alu 1 133 0 234 0 0 0 chr10 26602153 26602179 -118987109 + (T)n Simple_repeat Simple_repeat 1 26 0 2455 224 17 82 chr10 26602371 26603012 -118986276 + L1ME1 LINE L1 5334 6015 -151 2444 67 3 16 chr10 26603012 26603327 -118985961 + AluY SINE Alu 1 311 0 2455 224 17 82 chr10 26603327 26603343 -118985945 + L1ME1 LINE L1 6015 6030 -136 2430 97 0 0 chr10 26603343 26603652 -118985636 + AluSg SINE Alu 1 309 -1 2455 224 17 82 chr10 26603652 26603785 -118985503 + L1ME1 LINE L1 6030 6089 -77 4277 66 193 2 chr10 26603785 26604361 -118984927 + LTR12 LTR ERV1 3 688 0 2455 224 17 82 chr10 26604361 26604429 -118984859 + L1ME1 LINE L1 6089 6160 -6 2153 134 3 0 chr10 26604449 26604755 -118984533 - AluSx SINE Alu -5 307 1 249 281 0 0 chr10 26604974 26605031 -118984257 - L2 LINE L2 -1 3312 3256 627 270 169 41 chr10 26605071 26605676 -118983612 - L2 LINE L2 -48 3265 2545 3131 157 19 6 chr10 26605704 26606240 -118983048 + L1MA3 LINE L1 5762 6304 -1 1037 270 41 47 chr10 26606444 26606995 -118982293 + L1MB4 LINE L1 5279 5836 -344 22 0 0 0 chr10 26607127 26607149 -118982139 + AT_rich Low_complexity Low_complexity 1 22 0 182 174 22 0 chr10 26607224 26607270 -118982018 + GA-rich Low_complexity Low_complexity 4 50 0 195 42 0 0 chr10 26609567 26609591 -118979697 + (A)n Simple_repeat Simple_repeat 1 24 0 2174 126 0 10 chr10 26609995 26610296 -118978992 - AluSx SINE Alu -11 301 4 248 0 0 30 chr10 26610393 26610426 -118978862 + (TTTTTG)n Simple_repeat Simple_repeat 3 34 0 565 121 85 99 chr10 26610797 26610938 -118978350 + MER53 DNA DNA 1 139 -50 790 175 42 0 chr10 26610939 26611059 -118978229 + FLAM_C SINE Alu 2 126 -17 2037 109 21 14 chr10 26611154 26611439 -118977849 + AluSc SINE Alu 1 287 -22 268 261 0 0 chr10 26611446 26611511 -118977777 + MER53 DNA DNA 125 189 0 1666 197 7 14 chr10 26611617 26611911 -118977377 - AluJo SINE Alu -20 292 1 291 104 0 0 chr10 26612149 26612197 -118977091 + (TC)n Simple_repeat Simple_repeat 1 48 0 346 281 78 7 chr10 26612576 26612729 -118976559 + L1MC/D LINE L1 5620 5783 -2025 1270 297 70 30 chr10 26612758 26613053 -118976235 + L1ME LINE L1 4106 4388 -1758 2045 133 6 16 chr10 26613053 26613368 -118975920 + AluSx SINE Alu 1 312 0 1270 297 70 30 chr10 26613368 26613866 -118975422 + L1ME LINE L1 4388 4931 -1215 985 301 35 56 chr10 26613871 26614303 -118974985 + LTR16A LTR ERVL 28 450 0 955 250 117 25 chr10 26614310 26614926 -118974362 + L1ME LINE L1 4943 5630 -540 2217 176 3 16 chr10 26614926 26615296 -118973992 + MLT1A1 LTR MaLR 1 365 0 955 250 117 25 chr10 26615296 26615377 -118973911 + L1ME LINE L1 5630 5702 -468 572 224 85 76 chr10 26615395 26615443 -118973845 + L1M3 LINE L1 5614 5660 -520 2128 81 0 0 chr10 26615443 26615703 -118973585 - AluY SINE Alu -9 302 43 572 224 85 76 chr10 26615703 26615867 -118973421 + L1M3 LINE L1 5660 5828 -352 2052 135 3 14 chr10 26616059 26616355 -118972933 + AluSx SINE Alu 1 293 -19 1663 116 43 0 chr10 26616504 26616762 -118972526 + L1MA4 LINE L1 6018 6286 -14 1772 179 0 10 chr10 26616867 26617168 -118972120 + AluJo SINE Alu 1 298 -14 192 40 0 0 chr10 26617168 26617193 -118972095 + (GA)n Simple_repeat Simple_repeat 2 26 0 2202 176 53 10 chr10 26617426 26617771 -118971517 + MLT2D LTR ERVL 1 330 -84 323 22 0 22 chr10 26617771 26617816 -118971472 + (TC)n Simple_repeat Simple_repeat 1 44 0 * 342 0 0 0 chr10 26617815 26617853 -118971435 + (CA)n Simple_repeat Simple_repeat 1 38 0 2202 176 53 10 chr10 26617816 26617904 -118971384 + MLT2D LTR ERVL 330 414 0 651 206 116 0 chr10 26618511 26618657 -118970631 - MER5A DNA MER1_type -26 163 1 1772 162 7 10 chr10 26618728 26619018 -118970270 - AluJo SINE Alu -23 289 1 196 391 16 0 chr10 26619192 26619256 -118970032 - L2 LINE L2 -92 3180 3116 451 241 98 8 chr10 26619560 26619693 -118969595 - MLT1B LTR MaLR -245 145 1 2188 109 3 7 chr10 26619747 26620051 -118969237 + AluSx SINE Alu 1 303 -9 2195 162 34 29 chr10 26620110 26620658 -118968630 + MLT2A2 LTR ERVL 3 554 0 799 198 12 6 chr10 26620686 26620848 -118968440 + MER3 DNA MER1_type 7 122 -87 2333 98 16 0 chr10 26621303 26621610 -118967678 + AluSx SINE Alu 1 312 0 234 324 36 54 chr10 26621725 26621836 -118967452 + MIR SINE MIR 13 121 -87 3164 128 20 0 chr10 26621840 26622380 -118966908 + L1MA5A LINE L1 5669 6292 -5 205 89 44 22 chr10 26622489 26622534 -118966754 + CT-rich Low_complexity Low_complexity 2 47 0 813 188 0 40 chr10 26622537 26622686 -118966602 - FLAM_C SINE Alu 0 143 1 306 408 40 26 chr10 26622727 26623183 -118966105 + L2 LINE L2 2372 2833 -481 2294 99 3 0 chr10 26623374 26623668 -118965620 + AluSx SINE Alu 1 295 -17 2128 122 7 0 chr10 26623801 26624095 -118965193 - AluSx SINE Alu -16 296 1 1486 256 36 17 chr10 26624097 26624518 -118964770 + LTR47B LTR ERVL 15 443 0 260 250 0 33 chr10 26624518 26624574 -118964714 - MER94 DNA DNA -77 57 4 258 258 200 17 chr10 26625560 26625710 -118963578 + L1ME LINE L1 5475 5596 -525 1657 150 13 80 chr10 26625710 26626023 -118963265 + AluSx SINE Alu 1 292 -20 258 258 200 17 chr10 26626023 26626167 -118963121 + L1ME LINE L1 5596 5823 -298 23 33 0 0 chr10 26626193 26626223 -118963065 + AT_rich Low_complexity Low_complexity 1 30 0 1766 144 17 34 chr10 26626290 26626588 -118962700 + AluJo SINE Alu 3 295 -17 608 101 72 15 chr10 26626622 26626630 -118962658 + (TA)n Simple_repeat Simple_repeat 1 7 -300 216 0 0 0 chr10 26626630 26626654 -118962634 + (TG)n Simple_repeat Simple_repeat 2 25 0 608 101 72 15 chr10 26626654 26626913 -118962375 + (TA)n Simple_repeat Simple_repeat 7 307 0 567 255 15 152 chr10 26627005 26627082 -118962206 + L2 LINE L2 2927 3013 -259 2973 94 3 0 chr10 26627082 26627445 -118961843 - THE1B LTR MaLR 0 364 1 567 255 15 152 chr10 26627445 26627763 -118961525 + L2 LINE L2 3013 3268 -4 582 227 170 35 chr10 26627978 26628207 -118961081 + MIR SINE MIR 3 262 0 496 122 178 0 chr10 26628325 26628415 -118960873 + MLT2B1 LTR ERVL 1 106 -409 1223 184 14 78 chr10 26628421 26628513 -118960775 + AluJb SINE Alu 26 122 -190 5560 36 12 8 chr10 26628513 26629151 -118960137 + L1PA5 LINE L1 5514 6154 0 237 65 0 0 chr10 26629151 26629182 -118960106 + (TA)n Simple_repeat Simple_repeat 2 32 0 1223 184 14 78 chr10 26629182 26629381 -118959907 + AluJb SINE Alu 120 299 -13 1275 238 55 28 chr10 26629381 26629742 -118959546 + MLT2B1 LTR ERVL 110 480 -40 319 269 13 0 chr10 26629742 26629767 -118959521 + L1MC4 LINE L1 6620 6696 -1344 459 0 0 0 chr10 26629767 26629818 -118959470 + (TA)n Simple_repeat Simple_repeat 1 51 0 528 149 0 23 chr10 26629918 26630005 -118959283 + AluJ/FRAM SINE Alu 214 298 -14 463 303 147 53 chr10 26631034 26631470 -118957818 - L2 LINE L2 -2 3311 2835 4452 166 24 21 chr10 26631519 26632677 -118956611 + L1MB3 LINE L1 4969 6128 -55 726 187 0 8 chr10 26632677 26632800 -118956488 + FLAM_A SINE Alu 1 122 -11 4452 166 24 21 chr10 26632800 26632855 -118956433 + L1MB3 LINE L1 6128 6181 -2 472 301 104 66 chr10 26632858 26633209 -118956079 - L2 LINE L2 -556 2758 2391 2130 114 3 10 chr10 26633209 26633515 -118955773 + AluSg SINE Alu 6 309 -1 472 301 104 66 chr10 26633515 26633529 -118955759 - L2 LINE L2 -923 2391 2379 345 276 103 94 chr10 26633525 26633594 -118955694 + L2 LINE L2 2912 2979 -334 * 1927 138 7 3 chr10 26633594 26633883 -118955405 - AluSx SINE Alu -22 290 1 345 276 103 94 chr10 26633883 26634154 -118955134 + L2 LINE L2 2979 3255 -58 1441 168 45 16 chr10 26634313 26634622 -118954666 - L1MA7 LINE L1 -10 6281 5964 202 282 199 46 chr10 26634654 26634785 -118954503 - L2 LINE L2 -1975 1339 1189 * 306 171 207 0 chr10 26634761 26634843 -118954445 - L2 LINE L2 -4 3268 3170 2485 74 0 3 chr10 26635384 26635694 -118953594 + AluY SINE Alu 1 309 -2 248 237 97 44 chr10 26636950 26637064 -118952224 + MIR SINE MIR 23 142 -66 908 297 34 31 chr10 26637178 26637595 -118951693 - LTR16A LTR ERVL -8 442 25 1887 154 94 30 chr10 26639257 26639659 -118949629 - MSTB1 LTR MaLR -4 428 1 1301 109 24 148 chr10 26639798 26639920 -118949368 + L1MA5A LINE L1 6004 6139 -158 2163 118 3 0 chr10 26639920 26640207 -118949081 + AluSx SINE Alu 1 288 -24 1301 109 24 148 chr10 26640207 26640415 -118948873 + L1MA5A LINE L1 6139 6293 -4 2105 148 0 0 chr10 26640418 26640716 -118948572 + AluSx SINE Alu 1 298 -14 402 311 48 6 chr10 26640817 26640984 -118948304 - MIR SINE MIR 0 262 89 565 244 58 6 chr10 26641247 26641403 -118947885 + FRAM SINE Alu 1 164 -2 1889 130 53 0 chr10 26642624 26642800 -118946488 - AluJo SINE Alu -3 309 111 282 56 0 0 chr10 26642800 26642836 -118946452 + (TTTA)n Simple_repeat Simple_repeat 4 39 0 1889 130 53 0 chr10 26642836 26642943 -118946345 - AluJo SINE Alu -201 111 11 814 199 0 7 chr10 26643114 26643254 -118946034 - L1PB4 LINE L1 -14 6142 6002 3892 97 32 0 chr10 26643254 26643791 -118945497 - MER41A LTR ERV1 0 554 1 12265 92 24 8 chr10 26643801 26645283 -118944005 - MER41A-int LTR ERV1 -12 5934 3610 2122 138 3 0 chr10 26645283 26645580 -118943708 + AluSx SINE Alu 1 298 -14 12265 92 24 8 chr10 26645580 26646095 -118943193 - MER41A-int LTR ERV1 -2336 3610 3105 3342 145 55 10 chr10 26646112 26646727 -118942561 - L1PB4 LINE L1 -153 6003 5361 584 274 52 52 chr10 26647266 26647518 -118941770 - MIR SINE MIR 0 262 11 447 125 0 0 chr10 26648217 26648289 -118940999 + (CA)n Simple_repeat Simple_repeat 2 73 0 724 265 58 29 chr10 26648298 26648645 -118940643 + L1ME4a LINE L1 5603 5959 -162 859 208 0 0 chr10 26648858 26649007 -118940281 + AluJo SINE Alu 126 274 -38 305 162 29 0 chr10 26649316 26649384 -118939904 + L1MA4 LINE L1 6224 6293 -7 32 0 0 0 chr10 26649386 26649418 -118939870 + AT_rich Low_complexity Low_complexity 1 32 0 201 194 0 56 chr10 26649981 26650053 -118939235 + T-rich Low_complexity Low_complexity 2 69 0 2045 125 0 0 chr10 26650062 26650350 -118938938 + AluSx SINE Alu 1 288 -24 564 203 42 28 chr10 26651689 26651832 -118937456 + FRAM SINE Alu 31 175 -1 426 127 0 0 chr10 26652149 26652220 -118937068 + (GGGA)n Simple_repeat Simple_repeat 4 74 0 393 203 80 0 chr10 26652646 26652784 -118936504 - MER3 DNA MER1_type 0 2585 2437 383 104 149 0 chr10 26652789 26652856 -118936432 - MER3 DNA MER1_type -92 117 41 4076 113 17 1 chr10 26653564 26654683 -118934605 + L1PA13 LINE L1 4716 5853 -310 2008 95 7 7 chr10 26654784 26655078 -118934210 + L1PA13 LINE L1 5856 6149 -14 1894 143 0 0 chr10 26655254 26655519 -118933769 + AluSx SINE Alu 1 265 -47 249 109 0 0 chr10 26655556 26655602 -118933686 + (TTAA)n Simple_repeat Simple_repeat 3 48 0 3088 247 78 31 chr10 26656127 26657865 -118931423 + L1MEc LINE L1 73 2056 -4340 1971 236 56 5 chr10 26658058 26658913 -118930375 + L1MEc LINE L1 2319 3338 -2877 1549 153 0 8 chr10 26659767 26660016 -118929272 - AluJo SINE Alu -15 297 51 280 268 78 13 chr10 26662357 26662510 -118926778 - MLT1J1 LTR MaLR -5 441 279 445 271 66 13 chr10 26662612 26662763 -118926525 - MLT1J2 LTR MaLR -21 429 271 336 325 124 62 chr10 26663525 26663848 -118925440 + L2 LINE L2 2925 3267 -5 384 343 99 21 chr10 26663998 26664240 -118925048 + MIR SINE MIR 2 262 0 2052 116 3 14 chr10 26664832 26665145 -118924143 + AluSx SINE Alu 1 310 0 717 308 166 56 chr10 26665226 26666345 -118922943 - L2 LINE L2 -2 3270 2037 478 113 47 0 chr10 26667150 26667256 -118922032 + GA-rich Low_complexity Low_complexity 2 112 0 240 236 56 0 chr10 26667878 26667950 -118921338 + (CATATA)n Simple_repeat Simple_repeat 3 78 0 466 270 69 16 chr10 26667994 26668183 -118921105 - L1MC4a LINE L1 -1922 5886 5688 2378 98 0 13 chr10 26668871 26669188 -118920100 + AluSq SINE Alu 1 313 0 1946 131 51 51 chr10 26669846 26670221 -118919067 - THE1C LTR MaLR 0 375 1 22 35 0 0 chr10 26670912 26670941 -118918347 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr10 26671450 26671478 -118917810 + AT_rich Low_complexity Low_complexity 1 28 0 578 244 103 62 chr10 26671589 26671631 -118917657 - HsTC2 DNA Tc2 2 1900 1861 2102 98 0 0 chr10 26671631 26671905 -118917383 + AluSx SINE Alu 21 294 -18 578 244 103 62 chr10 26671905 26672097 -118917191 - HsTC2 DNA Tc2 -37 1861 1678 2969 173 66 41 chr10 26672097 26672812 -118916476 + MER44D DNA MER2_type 1 605 0 578 244 103 62 chr10 26672812 26673011 -118916277 - HsTC2 DNA Tc2 -220 1678 1272 * 742 223 101 92 chr10 26673003 26673140 -118916148 - HsTC2 DNA Tc2 -1526 372 238 2333 100 0 0 chr10 26673140 26673439 -118915849 - AluSx SINE Alu -13 299 1 742 223 101 92 chr10 26673439 26673460 -118915828 - HsTC2 DNA Tc2 -1660 238 219 2335 95 0 3 chr10 26673460 26673756 -118915532 - AluSx SINE Alu -17 295 1 742 223 101 92 chr10 26673756 26673964 -118915324 - HsTC2 DNA Tc2 -1679 219 2 897 199 0 36 chr10 26674260 26674426 -118914862 + AluJo SINE Alu 1 160 -152 850 308 113 9 chr10 26675244 26675700 -118913588 - L2 LINE L2 -63 3250 2745 601 278 139 21 chr10 26677008 26677289 -118911999 + L2 LINE L2 2995 3308 -5 180 270 0 0 chr10 26678044 26678081 -118911207 - L2 LINE L2 -18 3254 3218 1156 216 28 28 chr10 26678822 26679076 -118910212 + AluJo SINE Alu 7 260 -52 2107 148 0 0 chr10 26679615 26679912 -118909376 - AluSx SINE Alu -15 297 1 255 244 103 13 chr10 26679927 26680005 -118909283 + L2 LINE L2 3229 3313 0 534 225 92 21 chr10 26680637 26680779 -118908509 + MIR SINE MIR 17 168 -94 639 217 23 0 chr10 26680879 26681008 -118908280 + MIR SINE MIR 131 262 0 323 370 16 8 chr10 26681331 26681458 -118907830 + L2 LINE L2 2632 2759 -555 407 383 105 20 chr10 26681521 26681913 -118907375 + L2 LINE L2 2832 3256 -16 674 267 61 51 chr10 26682822 26683165 -118906123 - MLT1I LTR MaLR -18 391 1 28 29 0 0 chr10 26683986 26684021 -118905267 + AT_rich Low_complexity Low_complexity 1 35 0 1559 262 48 32 chr10 26684083 26684769 -118904519 - LTR51 LTR ERV1 -70 738 1 1025 178 13 49 chr10 26684870 26685095 -118904193 - MER20 DNA MER1_type 0 219 3 1017 255 134 86 chr10 26685178 26685569 -118903719 - MLT1G LTR MaLR 0 590 167 2112 124 10 0 chr10 26685569 26685868 -118903420 - AluSx SINE Alu -10 302 1 1017 255 134 86 chr10 26685868 26686044 -118903244 - MLT1G LTR MaLR -423 167 1 198 0 0 0 chr10 26686389 26686411 -118902877 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 6153 137 16 1 chr10 26686414 26687963 -118901325 - L1PB1 LINE L1 -3 6148 4579 62 36 0 0 chr10 26689466 26689549 -118899739 + AT_rich Low_complexity Low_complexity 1 83 0 183 80 0 0 chr10 26689962 26689987 -118899301 + (A)n Simple_repeat Simple_repeat 1 25 0 2146 144 46 8 chr10 26690093 26690461 -118898827 + MSTB1 LTR MaLR 51 432 0 229 240 60 20 chr10 26690462 26690562 -118898726 + L1M4 LINE L1 5693 5796 -382 294 309 56 16 chr10 26690854 26690980 -118898308 - MLT1I LTR MaLR -2 407 277 240 135 54 108 chr10 26691084 26691158 -118898130 - MLT1J2 LTR MaLR -313 137 68 292 291 40 0 chr10 26691721 26691851 -118897437 - L1ME LINE L1 -708 5462 5328 368 294 56 0 chr10 26691950 26692110 -118897178 - L1ME LINE L1 -1072 5074 4906 602 271 39 6 chr10 26693464 26693645 -118895643 + MLT1J LTR MaLR 1 187 -324 21 0 0 0 chr10 26693896 26693917 -118895371 + AT_rich Low_complexity Low_complexity 1 21 0 502 256 196 0 chr10 26694195 26694363 -118894925 - MIR SINE MIR -56 206 6 270 265 129 41 chr10 26694363 26694533 -118894755 - Charlie8 DNA MER1_type -2158 259 75 26 30 0 0 chr10 26695888 26695921 -118893367 + AT_rich Low_complexity Low_complexity 1 33 0 240 385 0 10 chr10 26696057 26696153 -118893135 - MIR SINE MIR -162 100 6 2606 216 45 35 chr10 26696517 26696805 -118892483 - L1ME2 LINE L1 0 6164 5880 2457 62 0 19 chr10 26696805 26697114 -118892174 - AluY SINE Alu -8 303 1 2606 216 45 35 chr10 26697114 26697561 -118891727 - L1ME2 LINE L1 -284 5880 5422 24 32 0 0 chr10 26697689 26697720 -118891568 + AT_rich Low_complexity Low_complexity 1 31 0 349 309 34 20 chr10 26697749 26697953 -118891335 - L1ME4a LINE L1 -275 6240 6034 303 298 166 33 chr10 26697975 26698156 -118891132 - L1ME4a LINE L1 -1959 4581 4377 1502 129 99 1 chr10 26698252 26698573 -118890715 + L1MA8 LINE L1 5917 6277 -23 180 179 0 0 chr10 26699085 26699124 -118890164 + T-rich Low_complexity Low_complexity 1 39 0 560 313 51 59 chr10 26699729 26700202 -118889086 - L1MC/D LINE L1 -2007 5801 5333 293 208 150 92 chr10 26700400 26700520 -118888768 + MIR SINE MIR 104 230 -32 240 59 0 0 chr10 26700732 26700766 -118888522 + (GTTTG)n Simple_repeat Simple_repeat 1 34 0 1316 205 0 30 chr10 26700868 26701136 -118888152 - AluJb SINE Alu -52 260 1 4452 148 19 23 chr10 26701483 26702344 -118886944 - L1MA9 LINE L1 -14 6298 5345 3716 144 25 6 chr10 26702394 26703061 -118886227 - L1MA9 LINE L1 -1168 4978 4299 234 151 0 57 chr10 26703534 26703587 -118885701 + CT-rich Low_complexity Low_complexity 5 54 0 211 264 0 0 chr10 26703689 26703758 -118885530 + (TTCA)n Simple_repeat Simple_repeat 1 69 0 476 282 92 20 chr10 26703894 26704089 -118885199 - L2 LINE L2 -901 2413 2205 1749 104 3 74 chr10 26705786 26706084 -118883204 - AluSx SINE Alu -35 277 1 2318 265 39 16 chr10 26707282 26708497 -118880791 - L1MEc LINE L1 -3230 3310 2091 243 88 0 0 chr10 26708497 26708531 -118880757 + (TG)n Simple_repeat Simple_repeat 1 34 0 2318 265 39 16 chr10 26708531 26708586 -118880702 - L1MEc LINE L1 -4449 2091 2039 303 185 0 0 chr10 26708609 26708663 -118880625 - MLT2B3 LTR ERVL 0 520 467 220 194 0 0 chr10 26708663 26708699 -118880589 + polypyrimidine Low_complexity Low_complexity 2 37 0 189 0 0 0 chr10 26708722 26708743 -118880545 + (TATG)n Simple_repeat Simple_repeat 4 24 0 2095 214 85 19 chr10 26708766 26709239 -118880049 - MLT2B3 LTR ERVL -46 508 5 508 211 30 23 chr10 26709243 26709376 -118879912 - L1MEc LINE L1 -4561 1979 1846 490 239 181 32 chr10 26709561 26709749 -118879539 - MIR SINE MIR 0 262 47 342 340 77 13 chr10 26709815 26709971 -118879317 - MIR3 SINE MIR -34 174 9 266 353 42 8 chr10 26710500 26710619 -118878669 + MIR SINE MIR 16 138 -70 351 274 12 0 chr10 26710639 26710723 -118878565 - L2 LINE L2 0 3272 3188 2148 80 42 0 chr10 26710932 26711220 -118878068 - AluY SINE Alu -11 300 1 31 76 0 0 chr10 26712404 26712470 -118876818 + AT_rich Low_complexity Low_complexity 1 66 0 2147 117 3 3 chr10 26715249 26715547 -118873741 - AluSg SINE Alu -12 298 1 21 57 0 0 chr10 26715847 26715882 -118873406 + AT_rich Low_complexity Low_complexity 1 35 0 580 325 105 18 chr10 26716561 26716903 -118872385 + L2 LINE L2 2369 2740 -574 2522 53 0 0 chr10 26716917 26717216 -118872072 - AluY SINE Alu -12 299 1 327 318 162 0 chr10 26717271 26717425 -118871863 + L2 LINE L2 2881 3059 -213 1157 260 46 48 chr10 26717439 26717896 -118871392 - LTR16A1 LTR ERVL -1 456 1 216 161 65 16 chr10 26717941 26718003 -118871285 + (TCTA)n Simple_repeat Simple_repeat 2 66 0 221 0 35 0 chr10 26718003 26718032 -118871256 + (ATTG)n Simple_repeat Simple_repeat 3 32 0 973 256 14 5 chr10 26718138 26718353 -118870935 - MIR SINE MIR 0 262 46 337 359 57 13 chr10 26718670 26718829 -118870459 + MIR3 SINE MIR 32 197 -11 483 207 25 25 chr10 26719405 26719526 -118869762 + MIR SINE MIR 24 144 -118 21 0 0 0 chr10 26720230 26720251 -118869037 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr10 26720551 26720575 -118868713 + AT_rich Low_complexity Low_complexity 1 24 0 2458 209 38 12 chr10 26720636 26721214 -118868074 - L1MA9 LINE L1 -39 6273 5681 1058 178 0 0 chr10 26721324 26721498 -118867790 - AluSx SINE Alu -4 308 135 445 123 0 0 chr10 26721498 26721563 -118867725 - AluSx SINE Alu -248 65 1 1933 169 43 62 chr10 26721564 26722079 -118867209 - MLT1D LTR MaLR 0 505 1 234 302 0 0 chr10 26722301 26722364 -118866924 + GA-rich Low_complexity Low_complexity 2 64 0 208 299 0 52 chr10 26722754 26722831 -118866457 + MIR3 SINE MIR 120 192 -16 207 341 110 0 chr10 26722846 26722928 -118866360 - MER5B DNA MER1_type -5 173 83 1214 234 54 28 chr10 26723247 26723564 -118865724 - L1ME2 LINE L1 -10 6154 5826 2352 71 0 34 chr10 26723564 26723886 -118865402 - AluY SINE Alu 0 311 1 1214 234 54 28 chr10 26723886 26723922 -118865366 - L1ME2 LINE L1 -338 5826 5792 686 211 83 39 chr10 26724058 26724238 -118865050 - MER58C DNA MER1_type 0 215 28 463 161 92 0 chr10 26724254 26724341 -118864947 + MER3 DNA MER1_type 1 95 -114 336 361 147 12 chr10 26724341 26724593 -118864695 + L3 LINE CR1 252 537 -1040 960 177 59 30 chr10 26724658 26724861 -118864427 - MER3 DNA MER1_type 0 209 1 545 277 6 60 chr10 26724861 26725027 -118864261 + L3 LINE CR1 584 740 -837 354 234 0 32 chr10 26725164 26725258 -118864030 - MER103 DNA DNA -45 121 31 391 318 28 28 chr10 26725263 26725439 -118863849 + L3 LINE CR1 780 955 -622 215 143 61 0 chr10 26725604 26725653 -118863635 + (TTTG)n Simple_repeat Simple_repeat 2 53 0 629 294 70 0 chr10 26725892 26726079 -118863209 + MIR SINE MIR 5 204 -58 254 214 129 14 chr10 26726170 26726240 -118863048 - MIR SINE MIR -112 150 73 328 311 68 40 chr10 26726806 26726954 -118862334 - L2 LINE L2 -5 3267 3116 229 289 0 0 chr10 26728041 26728093 -118861195 + (CATA)n Simple_repeat Simple_repeat 2 53 0 243 88 0 0 chr10 26728482 26728516 -118860772 + (CA)n Simple_repeat Simple_repeat 1 34 0 299 85 21 0 chr10 26728516 26728563 -118860725 + (GA)n Simple_repeat Simple_repeat 1 48 0 1742 164 31 0 chr10 26728873 26729160 -118860128 - AluJo SINE Alu -13 299 4 1102 258 87 49 chr10 26729173 26729648 -118859640 - L1MC4a LINE L1 -1929 5879 5379 1905 73 55 0 chr10 26729648 26729920 -118859368 - L1PA10 LINE L1 -11 6157 5871 1102 258 87 49 chr10 26729920 26729999 -118859289 - L1MC4a LINE L1 -2429 5379 5304 4539 195 37 18 chr10 26730023 26731081 -118858207 - L1MB3 LINE L1 0 6183 5073 2493 116 6 6 chr10 26731081 26731443 -118857845 + THE1B LTR MaLR 1 362 -2 4539 195 37 18 chr10 26731443 26732080 -118857208 - L1MB3 LINE L1 -1110 5073 4450 500 288 98 80 chr10 26732086 26733126 -118856162 - L1MC4a LINE L1 -855 5291 4270 4774 216 52 25 chr10 26733126 26734541 -118854747 - Charlie1a DNA MER1_type 0 1455 3 500 288 98 80 chr10 26734541 26734722 -118854566 - L1MC4a LINE L1 -1876 4270 4094 1466 29 0 0 chr10 26734722 26734895 -118854393 + L1PA4 LINE L1 5977 6149 -6 500 288 98 80 chr10 26734895 26735584 -118853704 - L1MC4a LINE L1 -2052 4094 3332 2216 90 0 0 chr10 26735584 26735886 -118853402 - AluSc SINE Alu 0 304 3 500 288 98 80 chr10 26735886 26736228 -118853060 - L1MC4a LINE L1 -2814 3332 2997 21 36 0 0 chr10 26736248 26736276 -118853012 + AT_rich Low_complexity Low_complexity 1 28 0 235 155 0 35 chr10 26736318 26736376 -118852912 + (TA)n Simple_repeat Simple_repeat 2 57 0 258 32 0 0 chr10 26736389 26736420 -118852868 + (CA)n Simple_repeat Simple_repeat 2 32 0 279 285 113 40 chr10 26736448 26736928 -118852360 - L1MC4a LINE L1 -3321 2825 2311 991 295 8 11 chr10 26737389 26737759 -118851529 - HAL1b LINE L1 -735 613 245 1804 240 86 31 chr10 26737761 26738310 -118850978 - MER119 DNA MER1_type 0 583 5 384 209 0 0 chr10 26738348 26738439 -118850849 + (TATG)n Simple_repeat Simple_repeat 3 93 0 2113 108 14 14 chr10 26738541 26738837 -118850451 - AluSx SINE Alu -16 296 1 1959 119 22 0 chr10 26739204 26739512 -118849776 - AluSx SINE Alu 0 314 1 198 324 14 14 chr10 26740240 26740314 -118848974 + L2 LINE L2 2694 2767 -547 305 330 74 80 chr10 26740595 26740946 -118848342 + L2 LINE L2 2915 3263 -9 411 301 18 9 chr10 26742540 26742653 -118846635 + MIR3 SINE MIR 54 167 -41 267 31 0 0 chr10 26743135 26743167 -118846121 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 2504 59 3 0 chr10 26743589 26743896 -118845392 + AluY SINE Alu 1 308 -3 10321 120 16 28 chr10 26743996 26744331 -118844957 - Tigger1 DNA MER2_type -788 1630 1293 2318 80 3 0 chr10 26744331 26744633 -118844655 - AluY SINE Alu -8 303 1 10321 120 16 28 chr10 26744633 26745017 -118844271 - Tigger1 DNA MER2_type -1125 1293 906 1390 194 45 21 chr10 26745017 26745306 -118843982 - AluJo SINE Alu -16 296 1 10321 120 16 28 chr10 26745306 26746233 -118843055 - Tigger1 DNA MER2_type -1512 906 2 1872 164 0 34 chr10 26746309 26746632 -118842656 - AluJo SINE Alu 0 312 1 3449 118 13 85 chr10 26746778 26746957 -118842331 - L1MA6 LINE L1 -388 5912 5722 198 0 0 0 chr10 26746957 26746979 -118842309 + (CA)n Simple_repeat Simple_repeat 2 23 0 3449 118 13 85 chr10 26746979 26747431 -118841857 - L1MA6 LINE L1 -578 5722 5343 2636 104 46 22 chr10 26747431 26747846 -118841442 - L1PA11 LINE L1 0 6174 5750 3449 118 13 85 chr10 26747846 26748012 -118841276 - L1MA6 LINE L1 -957 5343 5167 1759 177 54 3 chr10 26748009 26748342 -118840946 + L1MA7 LINE L1 5909 6258 -33 * 395 208 52 0 chr10 26748342 26748419 -118840869 + Tigger5 DNA MER2_type 1 81 -2242 298 270 79 22 chr10 26748419 26748508 -118840780 - Tigger5 DNA MER2_type -6 2317 2224 * 394 268 0 0 chr10 26748487 26748569 -118840719 + Tigger5 DNA MER2_type 2242 2323 0 275 167 0 0 chr10 26748569 26748617 -118840671 + L1MA9 LINE L1 6265 6312 0 291 85 0 0 chr10 26748734 26748781 -118840507 + (CA)n Simple_repeat Simple_repeat 2 48 0 25 0 0 0 chr10 26749348 26749373 -118839915 + AT_rich Low_complexity Low_complexity 1 25 0 2177 123 0 0 chr10 26750134 26750436 -118838852 + AluSq SINE Alu 1 302 -11 2435 50 0 13 chr10 26750639 26750940 -118838348 + AluY SINE Alu 1 297 -14 987 73 46 20 chr10 26751499 26751650 -118837638 - L1PA2 LINE L1 0 6155 6001 1454 178 22 38 chr10 26752409 26752724 -118836564 - AluJo SINE Alu 0 312 3 274 234 218 0 chr10 26753303 26753427 -118835861 + L1MC5 LINE L1 7757 7907 -54 254 222 222 32 chr10 26753588 26753714 -118835574 - MER5B DNA MER1_type -28 150 1 251 287 35 11 chr10 26753902 26753989 -118835299 - MIR3 SINE MIR -7 201 113 204 297 0 68 chr10 26754015 26754089 -118835199 - L2 LINE L2 -9 3263 3195 301 226 97 73 chr10 26756140 26756264 -118833024 + MIR SINE MIR 80 206 -56 21 0 0 0 chr10 26756482 26756503 -118832785 + AT_rich Low_complexity Low_complexity 1 21 0 505 279 49 22 chr10 26757349 26757532 -118831756 + MIR SINE MIR 75 262 0 1109 279 122 28 chr10 26757882 26758416 -118830872 + MLT1L LTR MaLR 15 598 -17 2646 254 72 13 chr10 26758634 26759816 -118829472 - L1ME3A LINE L1 0 6170 4917 334 134 96 4 chr10 26759872 26760111 -118829177 + (TA)n Simple_repeat Simple_repeat 1 260 0 842 230 70 33 chr10 26760179 26760479 -118828809 - L1ME3A LINE L1 -1424 4722 4412 430 202 50 0 chr10 26760495 26760594 -118828694 - FLAM_A SINE Alu -2 140 37 10649 193 44 18 chr10 26760729 26763394 -118825894 - L1PBa LINE L1 -1510 5352 2607 793 288 77 9 chr10 26763496 26763965 -118825323 - L1M LINE L1 -743 5403 4917 325 126 96 18 chr10 26764020 26764290 -118824998 + (TA)n Simple_repeat Simple_repeat 1 291 0 2087 230 94 62 chr10 26764357 26764678 -118824610 - L1M4 LINE L1 -1424 4722 4413 1420 146 146 22 chr10 26764678 26764946 -118824342 - AluJo SINE Alu 0 302 2 2087 230 94 62 chr10 26764946 26765566 -118823722 - L1M4 LINE L1 -1733 4413 3750 249 198 17 112 chr10 26765831 26765947 -118823341 - L1ME LINE L1 -5926 144 40 697 316 90 32 chr10 26766123 26766956 -118822332 + L1MEc LINE L1 940 1820 -4576 210 37 0 0 chr10 26767496 26767523 -118821765 + (CAAAAA)n Simple_repeat Simple_repeat 2 28 0 327 213 66 16 chr10 26768154 26768276 -118821012 - L1ME4a LINE L1 -16 6105 5978 364 348 79 17 chr10 26769243 26769421 -118819867 - MER5A DNA MER1_type 0 189 1 1237 103 82 30 chr10 26769933 26770166 -118819122 - L1MA8 LINE L1 -4 6287 6043 1998 169 35 3 chr10 26770423 26770766 -118818522 - MLT1A1 LTR MaLR -11 354 1 25 0 0 0 chr10 26772112 26772137 -118817151 + AT_rich Low_complexity Low_complexity 1 25 0 585 318 23 18 chr10 26772522 26772739 -118816549 + MIR SINE MIR 8 225 -37 1605 237 53 12 chr10 26772750 26773167 -118816121 - MLT1D LTR MaLR -66 439 6 360 0 0 0 chr10 26774057 26774097 -118815191 + (CA)n Simple_repeat Simple_repeat 2 41 0 2478 175 55 17 chr10 26774656 26775053 -118814235 - MLT1D LTR MaLR -8 497 78 1789 158 158 13 chr10 26775053 26775427 -118813861 + MSTA LTR MaLR 1 428 0 2478 175 55 17 chr10 26775427 26775504 -118813784 - MLT1D LTR MaLR -427 78 5 24 53 0 0 chr10 26775910 26775948 -118813340 + AT_rich Low_complexity Low_complexity 1 38 0 183 80 0 0 chr10 26777360 26777385 -118811903 + (T)n Simple_repeat Simple_repeat 1 25 0 1801 92 4 0 chr10 26777391 26777652 -118811636 - L1PA11 LINE L1 0 6174 5913 532 15 0 0 chr10 26779087 26779152 -118810136 + L1PA3 LINE L1 6091 6155 0 1077 195 90 67 chr10 26779347 26779737 -118809551 - L1 LINE L1 -3826 2502 2098 1991 135 3 3 chr10 26779737 26780033 -118809255 + AluSq SINE Alu 3 298 -15 1077 195 90 67 chr10 26780033 26780168 -118809120 - L1 LINE L1 -4230 2098 1968 1895 172 47 7 chr10 26780279 26781907 -118807381 - L1 LINE L1 -4083 1245 3 2079 148 19 23 chr10 26781955 26782318 -118806970 + THE1B LTR MaLR 1 426 -2 11262 106 6 1 chr10 26782320 26783893 -118805395 + THE1B-int LTR MaLR 1 1580 0 2310 115 19 22 chr10 26783893 26784258 -118805030 + THE1B LTR MaLR 1 364 0 1276 238 36 30 chr10 26784258 26784725 -118804563 - L1M4 LINE L1 -3270 2876 2407 4650 200 33 26 chr10 26784748 26784796 -118804492 - L1MB2 LINE L1 -9 6162 6116 6695 81 12 11 chr10 26784796 26786514 -118802774 - L1PA7 LINE L1 -14 6140 4425 4650 200 33 26 chr10 26786514 26788352 -118800936 - L1MB2 LINE L1 -55 6116 4261 411 243 145 25 chr10 26788343 26788578 -118800710 - L1M4 LINE L1 -3717 2429 2167 * 256 233 0 41 chr10 26788632 26788705 -118800583 - L3 LINE CR1 -557 1020 951 721 212 31 62 chr10 26788915 26788951 -118800337 + MIR SINE MIR 65 101 -161 2917 142 27 8 chr10 26788951 26789429 -118799859 - LTR45B LTR ERV1 0 489 3 721 212 31 62 chr10 26789429 26789585 -118799703 + MIR SINE MIR 101 251 -11 560 333 42 17 chr10 26789526 26789763 -118799525 - MIR SINE MIR -6 256 14 * 281 312 178 32 chr10 26789759 26790102 -118799186 - L3 LINE CR1 -878 699 307 * 24 0 0 0 chr10 26790578 26790602 -118798686 + AT_rich Low_complexity Low_complexity 1 24 0 1061 272 137 41 chr10 26791298 26791953 -118797335 - L1ME3A LINE L1 -42 6128 5537 1857 139 11 41 chr10 26791953 26792321 -118796967 - L1MA8 LINE L1 -4 6287 5931 1061 272 137 41 chr10 26792321 26793173 -118796115 - L1ME3A LINE L1 -633 5537 4468 420 309 55 14 chr10 26793179 26793396 -118795892 - L1ME3A LINE L1 -3623 2523 2298 672 292 46 29 chr10 26793565 26793805 -118795483 + LTR16C LTR ERVL 248 491 0 2200 133 37 0 chr10 26793815 26794222 -118795066 + L1PA13 LINE L1 5189 5607 -556 * 22112 30 3 0 chr10 26794220 26796902 -118792386 - L1P LINE L1 -1517 4629 1941 7503 29 7 1 chr10 26796902 26798386 -118790902 + L1PA3 LINE L1 4664 6152 -3 3024 140 29 4 chr10 26798424 26798916 -118790372 + L1PA13 LINE L1 5593 6096 -67 1034 282 65 23 chr10 26798995 26799697 -118789591 - L1MEc LINE L1 -3035 3180 2449 3925 234 60 30 chr10 26799775 26801097 -118788191 - L1MD2 LINE L1 -18 6410 5012 183 42 0 0 chr10 26801097 26801121 -118788167 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 3925 234 60 30 chr10 26801121 26801772 -118787516 - L1MD2 LINE L1 -1416 5012 4382 657 291 31 88 chr10 26802082 26802696 -118786592 - L1MD2 LINE L1 -4586 1810 1232 3869 161 37 1 chr10 26802886 26803615 -118785673 - L1MB7 LINE L1 0 6184 5430 453 211 109 51 chr10 26803669 26803844 -118785444 - L1ME3A LINE L1 -76 6094 5910 502 259 118 84 chr10 26804006 26804307 -118784981 - L1MEc LINE L1 -4169 2227 1903 1683 195 13 10 chr10 26804307 26804614 -118784674 - AluJo SINE Alu -4 308 1 502 259 118 84 chr10 26804614 26804786 -118784502 - L1MEc LINE L1 -4493 1903 1738 413 224 12 0 chr10 26805610 26805695 -118783593 - L2 LINE L2 -1 3312 3227 413 264 88 50 chr10 26805873 26806055 -118783233 - L1ME3A LINE L1 -221 5949 5761 226 333 12 0 chr10 26806070 26806154 -118783134 - L1ME3A LINE L1 -516 5648 5564 308 396 55 0 chr10 26806249 26806431 -118782857 - L2 LINE L2 -616 2698 2507 840 296 137 48 chr10 26806544 26807231 -118782057 - L2 LINE L2 -1159 2155 1408 2095 118 0 16 chr10 26808343 26808658 -118780630 - AluSg SINE Alu 0 310 1 740 219 168 0 chr10 26809393 26809589 -118779699 + MIR SINE MIR 31 259 -3 7229 197 34 28 chr10 26810483 26813035 -118776253 - L1MB2 LINE L1 -4 6167 3612 2312 92 0 3 chr10 26813035 26813328 -118775960 - AluSc SINE Alu -15 294 3 7229 197 34 28 chr10 26813328 26813552 -118775736 - L1MB2 LINE L1 -2559 3612 3391 7039 183 91 45 chr10 26814167 26815367 -118773921 + MER52A LTR ERV1 50 1194 -561 2241 152 25 0 chr10 26815367 26815722 -118773566 + THE1B LTR MaLR 1 364 0 10565 112 8 31 chr10 26815722 26817339 -118771949 + THE1B-int LTR MaLR 1 1580 0 2500 129 3 0 chr10 26817339 26817702 -118771586 + THE1B LTR MaLR 1 364 0 7039 183 91 45 chr10 26817702 26818036 -118771252 + MER52A LTR ERV1 1193 1755 0 22 35 0 0 chr10 26818043 26818072 -118771216 + AT_rich Low_complexity Low_complexity 1 29 0 255 314 49 10 chr10 26819028 26819130 -118770158 + L2 LINE L2 2052 2157 -1157 374 219 0 0 chr10 26819130 26819203 -118770085 - 7SK RNA RNA 0 193 121 709 198 0 16 chr10 26819239 26819365 -118769923 - 7SK RNA RNA -68 125 2 1272 261 41 26 chr10 26819367 26819758 -118769530 + L2 LINE L2 2143 2539 -775 295 359 35 28 chr10 26819774 26819916 -118769372 - MIR SINE MIR -113 149 7 27 0 0 0 chr10 26820385 26820412 -118768876 + AT_rich Low_complexity Low_complexity 1 27 0 203 203 0 51 chr10 26820860 26820919 -118768369 + T-rich Low_complexity Low_complexity 3 58 0 270 81 0 0 chr10 26821014 26821051 -118768237 + (CCTA)n Simple_repeat Simple_repeat 2 38 0 584 286 0 0 chr10 26821890 26822037 -118767251 - MLT1E LTR MaLR -9 645 499 770 164 0 0 chr10 26822038 26822154 -118767134 + FLAM_C SINE Alu 1 116 -17 905 275 57 45 chr10 26822329 26822727 -118766561 - MLT1E LTR MaLR -146 447 45 237 135 0 0 chr10 26823236 26823273 -118766015 + MLT1E3 LTR MaLR 1 37 -587 1473 235 27 46 chr10 26823367 26823813 -118765475 + MLT1E3 LTR MaLR 130 624 0 2231 136 3 45 chr10 26824414 26824505 -118764783 + MER1B DNA MER1_type 1 94 -2618 1881 163 70 14 chr10 26824505 26824860 -118764428 - THE1C LTR MaLR 0 375 1 2231 136 3 45 chr10 26824860 26825122 -118764166 + MER1B DNA MER1_type 94 339 0 242 236 55 0 chr10 26825504 26825559 -118763729 + L2 LINE L2 3256 3313 0 2938 221 31 36 chr10 26827469 26828268 -118761020 + L1MC4 LINE L1 7239 8033 -9 32 0 0 0 chr10 26828429 26828461 -118760827 + AT_rich Low_complexity Low_complexity 1 32 0 263 288 12 0 chr10 26828614 26828694 -118760594 - L1ME LINE L1 -280 5841 5761 21 36 0 0 chr10 26830788 26830816 -118758472 + AT_rich Low_complexity Low_complexity 1 28 0 273 57 0 0 chr10 26831017 26831052 -118758236 + (T)n Simple_repeat Simple_repeat 1 35 0 585 287 61 81 chr10 26831677 26831985 -118757303 + LTR16C LTR ERVL 97 397 -94 3543 120 43 26 chr10 26831985 26832608 -118756680 - LTR24C LTR ERV1 -1 634 1 585 287 61 81 chr10 26832608 26832693 -118756595 + LTR16C LTR ERVL 397 482 -9 1582 308 70 0 chr10 26832894 26833439 -118755849 + L2 LINE L2 2155 2737 -577 195 42 0 0 chr10 26833439 26833463 -118755825 + (CCCTAA)n Simple_repeat Simple_repeat 5 28 0 198 365 107 6 chr10 26835173 26835332 -118753956 + L2 LINE L2 1535 1709 -1605 2076 125 0 0 chr10 26835861 26836163 -118753125 + AluSg SINE Alu 3 304 0 268 284 0 45 chr10 26836165 26836253 -118753035 - MIR3 SINE MIR -46 162 79 2540 62 3 0 chr10 26837177 26837486 -118751802 + AluY SINE Alu 1 310 -1 1640 158 3 53 chr10 26838556 26838859 -118750429 + AluJo SINE Alu 3 290 -22 478 295 8 0 chr10 26840384 26840513 -118748775 + MIR SINE MIR 14 143 -119 1800 190 58 15 chr10 26840519 26841221 -118748067 + L1MB7 LINE L1 4968 5704 -480 1691 166 36 15 chr10 26841222 26841553 -118747735 + L1MB7 LINE L1 5845 6182 -2 193 328 0 0 chr10 26841562 26841629 -118747659 + MIR SINE MIR 146 212 -50 273 243 57 0 chr10 26842225 26842295 -118746993 - MIR SINE MIR -57 151 78 27 62 0 0 chr10 26844069 26844117 -118745171 + AT_rich Low_complexity Low_complexity 1 48 0 9731 62 96 5 chr10 26844290 26845639 -118743649 - L1P LINE L1 -4674 1472 1 3417 182 45 8 chr10 26845971 26846538 -118742750 - L1MB4 LINE L1 -109 6071 5470 230 0 33 0 chr10 26846538 26846568 -118742720 + (TTG)n Simple_repeat Simple_repeat 2 32 0 3417 182 45 8 chr10 26846568 26846726 -118742562 - L1MB4 LINE L1 -710 5470 5319 760 161 8 0 chr10 26846735 26846865 -118742423 - L1MC1 LINE L1 -195 6138 6008 * 3746 211 19 31 chr10 26846862 26847048 -118742240 - L1MB4 LINE L1 -814 5332 5145 1605 192 3 14 chr10 26847048 26847335 -118741953 - AluJo SINE Alu -28 284 1 3746 211 19 31 chr10 26847335 26848083 -118741205 - L1MB4 LINE L1 -1001 5145 4409 1613 128 57 60 chr10 26849147 26849429 -118739859 + MER1B DNA MER1_type 59 339 0 2368 99 14 3 chr10 26849604 26849948 -118739340 - L1PB1 LINE L1 -15 6136 5789 202 182 0 0 chr10 26849948 26849981 -118739307 + (TG)n Simple_repeat Simple_repeat 1 33 0 269 168 0 84 chr10 26849981 26850076 -118739212 + L1MC4 LINE L1 6617 6703 -1339 3146 106 18 4 chr10 26850086 26850279 -118739009 - L1PB1 LINE L1 -369 5782 5593 8524 46 11 5 chr10 26850279 26852132 -118737156 - L1PA6 LINE L1 -8 6146 4281 3146 106 18 4 chr10 26852132 26852393 -118736895 - L1PB1 LINE L1 -558 5593 5322 755 245 39 0 chr10 26852400 26852604 -118736684 + L1PB1 LINE L1 5104 5315 -831 242 285 16 114 chr10 26852909 26853032 -118736256 + MIR SINE MIR 35 145 -117 4668 151 30 0 chr10 26853032 26853793 -118735495 - Tigger1 DNA MER2_type -1631 787 4 24 0 0 0 chr10 26855632 26855656 -118733632 + AT_rich Low_complexity Low_complexity 1 24 0 14175 23 12 0 chr10 26856471 26858896 -118730392 + L1PA3 LINE L1 3717 6152 -3 284 307 122 34 chr10 26859182 26859420 -118729868 + L1MC/D LINE L1 5491 5749 -2059 293 339 38 60 chr10 26859651 26859834 -118729454 - L2 LINE L2 0 3313 3135 386 316 98 35 chr10 26859912 26860086 -118729202 - MIR SINE MIR -77 185 1 427 107 27 0 chr10 26860414 26860489 -118728799 + (TG)n Simple_repeat Simple_repeat 1 77 0 667 175 0 36 chr10 26860570 26860735 -118728553 - FLAM_C SINE Alu 0 161 2 2208 75 3 11 chr10 26860780 26861086 -118728202 + AluY SINE Alu 1 304 0 422 275 118 34 chr10 26861586 26861764 -118727524 + MIR SINE MIR 1 193 -69 798 326 73 78 chr10 26862017 26862997 -118726291 - L2 LINE L2 -2 3311 2346 984 188 0 0 chr10 26863008 26863189 -118726099 + MER53 DNA DNA 9 189 0 589 336 97 17 chr10 26863201 26863612 -118725676 - L2 LINE L2 -985 2329 1886 1948 154 0 0 chr10 26864135 26864428 -118724860 - AluJb SINE Alu -17 295 3 242 287 35 0 chr10 26864460 26864547 -118724741 + L1M4 LINE L1 4910 4999 -1147 341 364 90 42 chr10 26864578 26865169 -118724119 - L2 LINE L2 -1407 1907 1289 1249 198 4 0 chr10 26865777 26866009 -118723279 + MER58B DNA MER1_type 98 330 -11 2070 132 41 41 chr10 26866009 26866373 -118722915 - THE1B LTR MaLR 0 364 1 209 388 9 26 chr10 26868492 26868608 -118720680 + MER5A DNA MER1_type 76 189 0 583 303 89 88 chr10 26869368 26869995 -118719293 + L2 LINE L2 2231 2861 -453 1297 203 0 76 chr10 26869995 26870177 -118719111 - AluJo SINE Alu -20 292 143 2138 130 0 0 chr10 26870177 26870477 -118718811 + AluSx SINE Alu 1 300 -12 1297 203 0 76 chr10 26870477 26870610 -118718678 - AluJo SINE Alu -169 143 1 583 303 89 88 chr10 26870610 26870711 -118718577 + L2 LINE L2 2861 2960 -354 744 215 141 16 chr10 26870864 26871055 -118718233 - MER20 DNA MER1_type -2 217 3 296 245 21 0 chr10 26871139 26871233 -118718055 + (TG)n Simple_repeat Simple_repeat 2 97 0 219 278 119 56 chr10 26871993 26872119 -118717169 + MIR3 SINE MIR 5 138 -70 480 277 165 11 chr10 26872134 26872322 -118716966 - MIR SINE MIR -3 259 43 2077 134 23 0 chr10 26873751 26874056 -118715232 - AluSx SINE Alu 0 312 1 23 33 0 0 chr10 26874096 26874126 -118715162 + AT_rich Low_complexity Low_complexity 1 30 0 15385 121 28 5 chr10 26874286 26875291 -118713997 + Tigger1 DNA MER2_type 1 982 -1436 2267 87 3 29 chr10 26875291 26875601 -118713687 - AluY SINE Alu -9 302 1 15385 121 28 5 chr10 26875601 26876957 -118712331 + Tigger1 DNA MER2_type 982 2416 -2 405 86 0 0 chr10 26876957 26877015 -118712273 + (TGGA)n Simple_repeat Simple_repeat 1 58 0 197 349 159 20 chr10 26878051 26878246 -118711042 - MIR SINE MIR -25 237 16 748 223 26 56 chr10 26879652 26879885 -118709403 + LTR12 LTR ERV1 238 463 -251 216 0 0 0 chr10 26880347 26880371 -118708917 + (CA)n Simple_repeat Simple_repeat 2 25 0 228 244 82 44 chr10 26880376 26880478 -118708810 - MER51D LTR ERV1 0 657 547 4745 127 34 8 chr10 26880478 26881237 -118708051 - MER4E LTR ERV1 0 779 1 228 244 82 44 chr10 26881237 26881269 -118708019 - MER51D LTR ERV1 -110 547 518 2797 149 54 31 chr10 26881309 26881881 -118707407 - LTR60 LTR ERV1 0 586 2 342 323 87 0 chr10 26881899 26882026 -118707262 + MIR SINE MIR 53 190 -72 304 311 119 90 chr10 26882418 26882662 -118706626 - L2 LINE L2 -49 3223 2973 2254 281 81 19 chr10 26882665 26883140 -118706148 + L2 LINE L2 2016 2563 -751 2446 85 3 0 chr10 26883140 26883447 -118705841 + AluY SINE Alu 1 308 -3 2254 281 81 19 chr10 26883447 26883773 -118705515 + L2 LINE L2 2563 2867 -447 996 195 147 51 chr10 26883859 26884192 -118705096 + MLT1A1 LTR MaLR 1 365 0 213 247 86 49 chr10 26884505 26884586 -118704702 + L2 LINE L2 2649 2732 -582 16586 37 5 0 chr10 26884594 26887394 -118701894 - L1PA5 LINE L1 0 6154 3350 1534 217 56 13 chr10 26887501 26887874 -118701414 + MLT1D LTR MaLR 3 391 -114 457 319 7 7 chr10 26888254 26888392 -118700896 + L2 LINE L2 3134 3271 -1 287 337 36 98 chr10 26890154 26890347 -118698941 - MIR3 SINE MIR -7 201 21 304 183 56 0 chr10 26890574 26890645 -118698643 + MER116 DNA Mariner 6 80 0 1226 203 8 4 chr10 26890923 26891160 -118698128 - L1MC4 LINE L1 -1013 7029 6792 279 54 0 0 chr10 26892122 26892159 -118697129 + (TG)n Simple_repeat Simple_repeat 2 38 0 4020 46 0 4 chr10 26892280 26892777 -118696511 - L1PA5 LINE L1 -4 6150 5656 544 215 54 34 chr10 26892779 26892984 -118696304 - HAL1b LINE L1 -311 1037 829 248 280 0 13 chr10 26893013 26893088 -118696200 - HAL1b LINE L1 -931 417 344 1890 106 8 0 chr10 26893090 26893346 -118695942 - AluSq SINE Alu -55 258 1 21 36 0 0 chr10 26893428 26893456 -118695832 + AT_rich Low_complexity Low_complexity 1 28 0 200 294 0 55 chr10 26893641 26893750 -118695538 + T-rich Low_complexity Low_complexity 3 105 0 2357 172 24 2 chr10 26893948 26894413 -118694875 - L1MB4 LINE L1 0 6180 5706 3355 214 69 12 chr10 26894438 26895203 -118694085 + MER54A LTR ERVL 93 901 0 1695 156 13 15 chr10 26895203 26895536 -118693752 - L1P2 LINE L1 -445 5709 5374 1581 211 3 7 chr10 26895820 26896114 -118693174 - AluJo SINE Alu -19 293 1 1402 255 59 15 chr10 26896232 26896624 -118692664 + L2 LINE L2 2135 2543 -771 464 260 80 47 chr10 26896773 26896923 -118692365 + L2 LINE L2 3158 3312 -1 597 330 25 13 chr10 26897302 26897538 -118691750 + L2 LINE L2 2804 3042 -271 1183 249 61 9 chr10 26899029 26899359 -118689929 + MLT1A1 LTR MaLR 1 347 -18 1320 249 27 22 chr10 26899571 26899977 -118689311 + L1ME1 LINE L1 5741 6148 -18 272 254 138 35 chr10 26900130 26900363 -118688925 - L1MEd LINE L1 -2944 3185 2911 1827 150 0 48 chr10 26900363 26900676 -118688612 - AluJb SINE Alu -14 298 1 272 254 138 35 chr10 26900676 26900753 -118688535 - L1MEd LINE L1 -3218 2911 2843 2011 154 3 0 chr10 26900805 26901104 -118688184 - AluSq SINE Alu -13 300 1 330 132 0 0 chr10 26901195 26901248 -118688040 + (CATA)n Simple_repeat Simple_repeat 2 54 0 927 296 88 11 chr10 26901248 26901795 -118687493 - L1MEd LINE L1 -3384 2745 2157 21 57 0 0 chr10 26901964 26901999 -118687289 + AT_rich Low_complexity Low_complexity 1 35 0 253 293 35 0 chr10 26902051 26902109 -118687179 + MIR SINE MIR 4 63 -199 3275 104 21 4 chr10 26902112 26902591 -118686697 + LTR15 LTR ERV1 1 487 -6 373 295 31 8 chr10 26902622 26902751 -118686537 + MIR SINE MIR 120 251 -11 297 169 0 0 chr10 26902756 26902815 -118686473 + (CAG)n Simple_repeat Simple_repeat 2 60 0 203 111 37 37 chr10 26903181 26903235 -118686053 + (TTAA)n Simple_repeat Simple_repeat 1 54 0 1082 304 96 40 chr10 26903284 26904246 -118685042 - L1MEd LINE L1 -4902 1217 332 219 36 0 0 chr10 26904459 26904487 -118684801 + (TC)n Simple_repeat Simple_repeat 2 29 0 1629 191 0 20 chr10 26904706 26905010 -118684278 + AluJo SINE Alu 1 298 -14 504 333 14 0 chr10 26906067 26906214 -118683074 + MIR3 SINE MIR 33 181 -27 350 236 210 19 chr10 26906590 26906747 -118682541 - MER5A DNA MER1_type 0 189 3 23 0 0 0 chr10 26907802 26907825 -118681463 + AT_rich Low_complexity Low_complexity 1 23 0 2062 131 10 3 chr10 26907980 26908285 -118681003 + AluJb SINE Alu 1 307 -5 284 263 71 50 chr10 26908882 26908981 -118680307 + MIR SINE MIR 31 131 -77 242 256 26 13 chr10 26909466 26909544 -118679744 + GA-rich Low_complexity Low_complexity 1 79 0 1664 139 87 4 chr10 26910018 26910284 -118679004 + AluSq SINE Alu 1 288 -25 209 362 111 39 chr10 26910532 26910839 -118678449 - L2 LINE L2 -24 3289 2961 367 326 43 0 chr10 26911935 26912073 -118677215 + MIR SINE MIR 111 254 -8 218 309 149 0 chr10 26912091 26912185 -118677103 - MIR SINE MIR -76 132 25 27 49 0 0 chr10 26913821 26913862 -118675426 + AT_rich Low_complexity Low_complexity 1 41 0 2173 123 40 40 chr10 26914157 26914532 -118674756 + THE1C LTR MaLR 1 375 0 240 295 134 13 chr10 26915219 26915368 -118673920 - L2 LINE L2 -29 3284 3118 272 347 0 0 chr10 26915629 26915724 -118673564 - L2 LINE L2 -556 2758 2664 330 336 31 87 chr10 26916043 26916468 -118672820 - MLT1I LTR MaLR -8 401 1 840 268 51 104 chr10 26916908 26917479 -118671809 - MLT1H1 LTR MaLR 0 555 1 2071 128 7 0 chr10 26917636 26917924 -118671364 - AluSx SINE Alu -22 290 1 2361 221 58 2 chr10 26918104 26918709 -118670579 + L1MC1 LINE L1 4696 5334 -812 1398 199 33 13 chr10 26918710 26919016 -118670272 + L1MC1 LINE L1 6016 6327 -6 31 26 0 0 chr10 26919061 26919099 -118670189 + AT_rich Low_complexity Low_complexity 1 38 0 26 0 0 0 chr10 26919581 26919607 -118669681 + AT_rich Low_complexity Low_complexity 1 26 0 786 171 89 13 chr10 26920359 26920517 -118668771 - MER5B DNA MER1_type 0 178 9 542 320 75 72 chr10 26920895 26921510 -118667778 + L1MEd LINE L1 90 706 -5413 625 270 146 28 chr10 26921692 26922471 -118666817 + L1M4 LINE L1 4068 4938 -1208 1070 232 13 18 chr10 26922473 26922614 -118666674 + MER58A DNA MER1_type 2 143 -2277 2055 142 39 94 chr10 26922614 26923072 -118666216 + Tigger2a DNA MER2_type 1 433 -1 1070 232 13 18 chr10 26923072 26923154 -118666134 + MER58A DNA MER1_type 143 224 0 426 242 70 53 chr10 26923166 26923451 -118665837 + L1M4 LINE L1 4942 5231 -915 287 83 0 0 chr10 26924257 26924293 -118664995 + U2 snRNA snRNA 1 36 -152 615 275 18 92 chr10 26924334 26924432 -118664856 - L3 LINE CR1 -600 977 873 1562 224 75 14 chr10 26924432 26924803 -118664485 + MSTD LTR MaLR 3 396 0 615 275 18 92 chr10 26924803 26925039 -118664249 - L3 LINE CR1 -704 873 668 216 0 0 0 chr10 26925091 26925115 -118664173 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1343 170 6 112 chr10 26925126 26925438 -118663850 - AluJb SINE Alu -33 279 1 26 64 0 0 chr10 26925538 26925585 -118663703 + AT_rich Low_complexity Low_complexity 1 47 0 2133 225 90 54 chr10 26925824 26926183 -118663105 + MLT1E1 LTR MaLR 1 394 -260 180 0 0 0 chr10 26926183 26926203 -118663085 + (CAAAA)n Simple_repeat Simple_repeat 5 24 0 2133 225 90 54 chr10 26926203 26926474 -118662814 + MLT1E1 LTR MaLR 394 654 0 21185 46 49 3 chr10 26928467 26931186 -118658102 + L1P LINE L1 1 2845 -3301 748 293 12 30 chr10 26931322 26931653 -118657635 + L1ME1 LINE L1 5824 6148 -18 526 263 158 56 chr10 26931795 26932040 -118657248 - L1MDa LINE L1 -2931 3609 3322 1448 196 3 48 chr10 26932040 26932352 -118656936 - AluJb SINE Alu -14 298 1 526 263 158 56 chr10 26932352 26932429 -118656859 - L1MDa LINE L1 -3218 3322 3254 2106 137 3 0 chr10 26932480 26932780 -118656508 - AluSq SINE Alu -12 301 1 312 137 0 0 chr10 26932871 26932922 -118656366 + (CATA)n Simple_repeat Simple_repeat 2 52 0 884 263 41 26 chr10 26933111 26933560 -118655728 - L1MDa LINE L1 -3616 2924 2471 195 222 0 22 chr10 26983714 26983759 -118605529 + MIR SINE MIR 216 259 -3 609 277 62 36 chr10 26984660 26984884 -118604404 - MLT1I LTR MaLR -18 391 162 28 29 0 0 chr10 26985824 26985859 -118603429 + AT_rich Low_complexity Low_complexity 1 35 0 1465 213 7 0 chr10 26986039 26986326 -118602962 - LTR51 LTR ERV1 -155 516 228 424 237 35 9 chr10 26986493 26986607 -118602681 - MER101B LTR ERV1 -453 117 1 1045 178 13 49 chr10 26986708 26986933 -118602355 - MER20 DNA MER1_type 0 219 3 868 233 139 88 chr10 26987016 26987407 -118601881 - MLT1G LTR MaLR 0 590 167 2167 124 10 0 chr10 26987407 26987706 -118601582 - AluSx SINE Alu -10 302 1 868 233 139 88 chr10 26987706 26987882 -118601406 - MLT1G LTR MaLR -423 167 1 198 0 0 0 chr10 26988227 26988249 -118601039 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 13090 182 42 13 chr10 26988252 26993062 -118596226 - L1PB1 LINE L1 -3 6864 1905 3514 10 2 0 chr10 26993062 26993464 -118595824 - L1PA2 LINE L1 -1 6154 5752 231 211 0 0 chr10 26995910 26996005 -118593283 + (TA)n Simple_repeat Simple_repeat 1 95 0 667 200 0 0 chr10 26996029 26996154 -118593134 - FAM SINE Alu -26 159 35 370 259 85 55 chr10 26996378 26996579 -118592709 + L2 LINE L2 3092 3298 -15 2211 165 57 23 chr10 26996591 26997063 -118592225 - L1MB7 LINE L1 -16 6168 5681 21 57 0 0 chr10 26997694 26997729 -118591559 + AT_rich Low_complexity Low_complexity 1 35 0 208 354 105 79 chr10 27005156 27005272 -118584016 + L2 LINE L2 2897 3009 -263 384 212 44 66 chr10 27005272 27005344 -118583944 + MER94 DNA DNA 1 70 -64 1809 164 3 23 chr10 27005344 27005643 -118583645 + AluJo SINE Alu 1 293 -19 384 212 44 66 chr10 27005643 27005707 -118583581 + MER94 DNA DNA 70 134 0 208 354 105 79 chr10 27005707 27005943 -118583345 + L2 LINE L2 3009 3258 -14 2153 113 0 7 chr10 27007236 27007527 -118581761 + AluSq SINE Alu 1 289 -24 2019 157 0 3 chr10 27007685 27007991 -118581297 + AluJo SINE Alu 1 305 -7 270 369 89 0 chr10 27008013 27008170 -118581118 + MIR3 SINE MIR 36 206 -2 273 57 0 0 chr10 27008170 27008205 -118581083 + (TG)n Simple_repeat Simple_repeat 2 36 0 25 0 0 0 chr10 27009442 27009467 -118579821 + AT_rich Low_complexity Low_complexity 1 25 0 1473 82 0 0 chr10 27009467 27009661 -118579627 - L1PA7 LINE L1 -4 6150 5957 2465 73 26 2 chr10 27009661 27010232 -118579056 + L1P3 LINE L1 5023 5603 -551 505 98 49 0 chr10 27010262 27010344 -118578944 - L1MA1 LINE L1 -6 7715 7630 13966 167 38 34 chr10 27010452 27017365 -118571923 - L1MA1 LINE L1 -405 7319 14 2020 153 7 0 chr10 27017376 27017677 -118571611 - AluSq SINE Alu -10 303 1 815 266 111 74 chr10 27018221 27018706 -118570582 + MLT1J LTR MaLR 3 505 -6 576 245 86 68 chr10 27018972 27019250 -118570038 - LTR26 LTR ERV1 0 727 348 970 183 58 144 chr10 27019726 27020038 -118569250 - LTR8 LTR ERV1 -436 255 1 28322 115 25 69 chr10 27020386 27026588 -118562700 + L1PA7 LINE L1 12 5923 -231 5216 54 9 1 chr10 27026588 27027239 -118562049 + L1PA7 LINE L1 5490 6147 -7 3385 140 25 27 chr10 27027784 27028414 -118560874 + L1PB4 LINE L1 5520 6148 -8 448 259 26 99 chr10 27028924 27029156 -118560132 + MLT1I LTR MaLR 194 408 -1 1901 162 17 28 chr10 27029371 27029397 -118559891 - L1PA15 LINE L1 -17 6148 6123 1917 161 0 3 chr10 27029397 27029688 -118559600 - AluJb SINE Alu -22 290 1 1901 162 17 28 chr10 27029688 27030020 -118559268 - L1PA15 LINE L1 -42 6123 5794 2244 88 115 6 chr10 27031347 27031687 -118557601 + MER51B LTR ERV1 1 377 0 817 121 0 0 chr10 27031983 27032099 -118557189 - AluJb SINE Alu -14 298 183 256 156 0 0 chr10 27032118 27032163 -118557125 + AluJb SINE Alu 67 111 -191 * 356 231 0 0 chr10 27032160 27032238 -118557050 - AluJ/FLAM SINE Alu -233 69 1 2016 153 0 0 chr10 27033179 27033467 -118555821 - AluSx SINE Alu -24 288 1 1834 167 0 0 chr10 27034440 27034727 -118554561 - AluJb SINE Alu -25 287 1 4169 54 5 0 chr10 27034928 27035500 -118553788 - L1P LINE L1 -5571 575 1 1785 116 20 3 chr10 27035506 27035807 -118553481 - L1PBa LINE L1 -4950 1913 1608 428 88 0 0 chr10 27035808 27035865 -118553423 - U6 snRNA snRNA -1 106 50 406 352 62 6 chr10 27036163 27036325 -118552963 + MIR3 SINE MIR 21 191 -17 2287 180 165 10 chr10 27037086 27037679 -118551609 - MER76 LTR ERV -2 686 2 437 243 118 0 chr10 27037718 27037854 -118551434 + L1MB8 LINE L1 2510 2661 -3485 * 4630 183 61 34 chr10 27037852 27039917 -118549371 + L1MB8 LINE L1 4062 6172 -6 2228 117 10 3 chr10 27039934 27040241 -118549047 + AluSx SINE Alu 1 309 -3 549 311 52 16 chr10 27040287 27040596 -118548692 + L1ME3 LINE L1 47 366 -5704 485 254 105 28 chr10 27040608 27040856 -118548432 - LTR41 LTR ERVL -7 766 500 1421 236 149 13 chr10 27040984 27041695 -118547593 + L1ME3 LINE L1 2117 2924 -3156 1642 255 55 7 chr10 27042185 27042770 -118546518 + L1ME3 LINE L1 4262 4874 -1206 2157 91 14 0 chr10 27042813 27043100 -118546188 + AluY SINE Alu 1 291 -20 229 316 0 0 chr10 27044036 27044112 -118545176 + L1ME3 LINE L1 5825 5900 -196 198 243 71 29 chr10 27044931 27045001 -118544287 + MIR SINE MIR 50 122 -140 236 240 110 20 chr10 27045502 27045602 -118543686 - MIR SINE MIR -90 172 64 455 285 65 34 chr10 27046587 27046878 -118542410 - L1MC4a LINE L1 -1884 5924 5625 226 403 47 20 chr10 27047005 27047154 -118542134 + MER5B DNA MER1_type 23 175 -3 892 241 53 4 chr10 27047503 27047748 -118541540 + MIR SINE MIR 4 260 -2 901 126 24 0 chr10 27048064 27048191 -118541097 + AluSq/x SINE Alu 1 130 -182 261 0 0 0 chr10 27048191 27048220 -118541068 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1416 143 0 108 chr10 27048221 27048480 -118540808 + AluSx SINE Alu 57 287 -25 192 77 0 0 chr10 27048483 27048509 -118540779 + (CAGA)n Simple_repeat Simple_repeat 2 27 0 1502 246 140 19 chr10 27048875 27049404 -118539884 + MLT1E LTR MaLR 1 593 0 409 336 14 7 chr10 27049685 27049831 -118539457 - MIR SINE MIR -114 148 2 31 99 0 0 chr10 27049911 27050012 -118539276 + AT_rich Low_complexity Low_complexity 1 101 0 334 314 83 0 chr10 27050892 27051013 -118538275 - MER91B DNA MER1_type -58 132 2 26 30 0 0 chr10 27051398 27051431 -118537857 + AT_rich Low_complexity Low_complexity 1 33 0 2234 112 147 5 chr10 27051483 27051858 -118537430 + MSTA LTR MaLR 1 428 0 192 77 0 0 chr10 27052050 27052076 -118537212 + (TTG)n Simple_repeat Simple_repeat 2 27 0 388 230 42 108 chr10 27052288 27052322 -118536966 - L1ME4a LINE L1 -153 5968 5933 788 214 0 88 chr10 27052322 27052514 -118536774 - FAM SINE Alu 0 175 1 388 230 42 108 chr10 27052514 27052692 -118536596 - L1ME4a LINE L1 -188 5933 5770 21 0 0 0 chr10 27053356 27053377 -118535911 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr10 27053468 27053490 -118535798 + AT_rich Low_complexity Low_complexity 1 22 0 7513 30 6 0 chr10 27053803 27054785 -118534503 + L1PA5 LINE L1 5159 6145 -9 297 0 0 0 chr10 27054785 27054818 -118534470 + (TA)n Simple_repeat Simple_repeat 2 34 0 287 288 17 0 chr10 27054885 27055028 -118534260 - L1ME4a LINE L1 -581 5581 5434 227 294 49 10 chr10 27055106 27055208 -118534080 - L1ME4a LINE L1 -837 5309 5204 232 139 76 13 chr10 27055663 27055742 -118533546 + (TTATA)n Simple_repeat Simple_repeat 1 84 0 2413 83 3 3 chr10 27056289 27056591 -118532697 + AluSq SINE Alu 1 302 -11 2148 125 0 0 chr10 27056881 27057169 -118532119 - AluSx SINE Alu -24 288 1 1461 234 23 0 chr10 27057233 27057587 -118531701 - L1PB4 LINE L1 -8 6148 5787 264 282 14 0 chr10 27058133 27058204 -118531084 + MIR SINE MIR 86 157 -105 23 54 0 0 chr10 27058427 27058464 -118530824 + AT_rich Low_complexity Low_complexity 1 37 0 6318 64 2 0 chr10 27058464 27059308 -118529980 - L1PA7 LINE L1 -7 6147 5302 201 178 0 0 chr10 27059492 27059537 -118529751 + CT-rich Low_complexity Low_complexity 3 47 0 266 290 80 20 chr10 27059545 27059645 -118529643 - L2 LINE L2 -2 3270 3165 778 228 37 5 chr10 27061297 27061488 -118527800 + L1P LINE L1 4821 5021 -1125 2375 78 0 0 chr10 27061488 27061782 -118527506 + AluY SINE Alu 1 294 -17 778 228 37 5 chr10 27061782 27061805 -118527483 + L1P LINE L1 5021 5042 -1104 244 180 20 0 chr10 27062367 27062417 -118526871 + Alu SINE Alu 2 52 -256 236 96 115 0 chr10 27062417 27062494 -118526794 + Alu SINE Alu 245 327 0 214 314 26 85 chr10 27062494 27062647 -118526641 + MIR SINE MIR 20 163 -99 402 219 36 122 chr10 27063111 27063240 -118526048 - LTR41 LTR ERVL -10 763 669 1873 157 20 16 chr10 27063240 27063546 -118525742 + AluSx SINE Alu 1 307 -5 402 219 36 122 chr10 27063546 27063694 -118525594 - LTR41 LTR ERVL -104 669 510 306 190 117 61 chr10 27063959 27064122 -118525166 - LTR41 LTR ERVL -601 172 1 237 139 0 0 chr10 27064324 27064367 -118524921 + (TTTC)n Simple_repeat Simple_repeat 2 44 0 23791 37 0 0 chr10 27064475 27067513 -118521775 - L1P LINE L1 -1034 5112 2075 552 213 73 0 chr10 27068659 27068795 -118520493 + MER103 DNA DNA 3 148 -18 265 169 48 24 chr10 27068824 27068907 -118520381 + L1ME4a LINE L1 5984 6068 -53 196 222 79 32 chr10 27069651 27069714 -118519574 + L2 LINE L2 2102 2167 -1147 864 272 19 38 chr10 27071580 27071845 -118517443 + MIR SINE MIR 3 262 0 3525 106 6 0 chr10 27072596 27073089 -118516199 + LOR1a LTR ERV1 2 497 0 2043 118 3 37 chr10 27073237 27073558 -118515730 + AluSg SINE Alu 1 310 0 1844 181 0 0 chr10 27073949 27074253 -118515035 - AluSx SINE Alu -8 304 1 236 258 55 86 chr10 27074540 27074668 -118514620 + L2 LINE L2 3145 3268 -4 596 285 42 72 chr10 27074803 27075164 -118514124 + MER93a LTR ERV1 53 402 0 200 362 0 0 chr10 27076880 27076938 -118512350 - MIR SINE MIR -130 78 21 2088 110 55 58 chr10 27077750 27078115 -118511173 + THE1B LTR MaLR 1 364 0 1381 148 48 65 chr10 27078590 27078723 -118510565 + AluJo SINE Alu 1 135 -167 2570 17 0 14 chr10 27078723 27079054 -118510234 + AluYb8 SINE Alu 2 328 0 1381 148 48 65 chr10 27079054 27079209 -118510079 + AluJo SINE Alu 135 285 -17 567 100 0 11 chr10 27080913 27081003 -118508285 - AluSg/x SINE Alu -3 306 218 435 307 139 36 chr10 27081484 27081927 -118507361 - L2 LINE L2 -5 3267 2716 883 255 56 4 chr10 27082546 27082777 -118506511 + MIR SINE MIR 10 252 -10 641 330 16 33 chr10 27083304 27083570 -118505718 - MIR SINE MIR 0 262 3 349 175 63 0 chr10 27085129 27085192 -118504096 + L2 LINE L2 3242 3308 -5 1198 41 0 0 chr10 27085470 27085617 -118503671 - L1PA4 LINE L1 -4 6151 6005 245 301 231 32 chr10 27086992 27087148 -118502140 + MIR3 SINE MIR 9 195 -13 269 281 0 49 chr10 27087460 27087542 -118501746 + L2 LINE L2 3236 3313 0 1183 239 82 31 chr10 27087639 27088128 -118501160 - MER113 DNA MER1_type? -3 518 5 624 193 40 62 chr10 27089655 27089831 -118499457 - MER97a DNA MER1_type? -722 172 1 343 141 71 10 chr10 27089872 27089971 -118499317 + GA-rich Low_complexity Low_complexity 4 108 0 6311 30 6 0 chr10 27089979 27090774 -118498514 - L1P LINE L1 -1385 4761 3962 21 0 0 0 chr10 27093157 27093178 -118496110 + AT_rich Low_complexity Low_complexity 1 21 0 2265 199 97 8 chr10 27093803 27094452 -118494836 - L1M4 LINE L1 -3189 3455 2749 363 296 126 0 chr10 27094463 27094662 -118494626 + L1ME4a LINE L1 5507 5730 -391 304 274 105 0 chr10 27094675 27094799 -118494489 + L1ME4a LINE L1 5798 5934 -187 2524 72 0 0 chr10 27095366 27095673 -118493615 - AluY SINE Alu 0 311 5 2919 258 70 8 chr10 27097217 27098382 -118490906 - L1M4 LINE L1 -2789 3357 2121 805 258 97 12 chr10 27098388 27098818 -118490470 - L1M4 LINE L1 -3828 2816 2357 2374 252 128 41 chr10 27098947 27100006 -118489282 - L1M4 LINE L1 -5380 1162 12 352 329 77 18 chr10 27100668 27100838 -118488450 + MIR3 SINE MIR 9 188 -20 5015 80 30 1 chr10 27100841 27101541 -118487747 - LTR30 LTR ERV1 -2 720 1 804 251 18 0 chr10 27102429 27102592 -118486696 - MER5A DNA MER1_type 0 189 24 561 324 119 60 chr10 27102765 27103698 -118485590 - L2 LINE L2 -452 2862 1875 248 286 0 0 chr10 27104974 27105030 -118484258 + L2 LINE L2 3205 3260 -12 2231 87 0 27 chr10 27105724 27106023 -118483265 + AluSx SINE Alu 5 295 -17 24 0 0 0 chr10 27106054 27106078 -118483210 + AT_rich Low_complexity Low_complexity 1 24 0 1071 158 6 0 chr10 27107437 27107608 -118481680 + FAM SINE Alu 1 172 -3 234 0 0 0 chr10 27109236 27109262 -118480026 + (A)n Simple_repeat Simple_repeat 1 26 0 2318 113 0 0 chr10 27109696 27109997 -118479291 + AluSg SINE Alu 3 303 -7 1094 161 0 0 chr10 27110010 27110171 -118479117 + AluSg/x SINE Alu 137 297 -15 858 202 16 16 chr10 27110501 27110689 -118478599 + MER5A DNA MER1_type 2 189 0 335 151 14 0 chr10 27111145 27111218 -118478070 - L1PB3 LINE L1 0 6154 6081 1835 114 23 8 chr10 27111319 27111581 -118477707 - AluSq SINE Alu -47 266 1 21 0 0 0 chr10 27111778 27111799 -118477489 + AT_rich Low_complexity Low_complexity 1 21 0 2236 120 0 0 chr10 27112228 27112536 -118476752 - AluSc SINE Alu 0 309 2 5017 84 3 0 chr10 27112796 27113454 -118475834 + PABL_A LTR ERV1 1 660 0 217 341 100 4 chr10 27113506 27113646 -118475642 + MIR SINE MIR 47 208 -54 762 186 0 0 chr10 27114302 27114431 -118474857 + FLAM_C SINE Alu 4 132 -1 357 305 11 46 chr10 27114656 27114812 -118474476 - MIR3 SINE MIR -14 194 44 420 283 110 7 chr10 27114902 27115047 -118474241 - MIR3 SINE MIR -8 200 41 688 197 54 27 chr10 27115091 27115238 -118474050 + L3 LINE CR1 244 394 -1183 278 211 253 21 chr10 27116078 27116173 -118473115 + L3 LINE CR1 558 674 -903 316 372 41 25 chr10 27116219 27116415 -118472873 + L3 LINE CR1 1377 1575 -2 586 329 104 37 chr10 27117254 27117775 -118471513 - L2 LINE L2 -223 3049 2491 1709 163 62 3 chr10 27118213 27118501 -118470787 - AluJo SINE Alu -7 305 1 29 0 0 0 chr10 27119306 27119335 -118469953 + AT_rich Low_complexity Low_complexity 1 29 0 411 304 33 24 chr10 27120352 27120687 -118468601 + L1ME4a LINE L1 5531 5868 -253 2472 126 40 26 chr10 27120829 27121251 -118468037 + MSTA LTR MaLR 1 428 0 660 266 28 20 chr10 27121303 27121555 -118467733 - MLT2F LTR ERVL -15 648 395 235 167 0 21 chr10 27121557 27121605 -118467683 + MLT1K LTR MaLR 540 586 -2 1641 198 7 3 chr10 27122256 27122559 -118466729 + AluJo SINE Alu 2 305 -7 749 58 0 10 chr10 27123063 27123167 -118466121 + (GAAA)n Simple_repeat Simple_repeat 2 104 0 264 167 0 0 chr10 27123167 27123215 -118466073 + GA-rich Low_complexity Low_complexity 2 49 0 1049 114 12 0 chr10 27123224 27123391 -118465897 + (GAAA)n Simple_repeat Simple_repeat 1 169 0 381 252 36 0 chr10 27124216 27124355 -118464933 - L1MA10 LINE L1 -9 6325 6182 229 294 18 18 chr10 27124800 27124909 -118464379 + GA-rich Low_complexity Low_complexity 3 111 0 2574 222 118 36 chr10 27125648 27126388 -118462900 - L1ME1 LINE L1 -55 6111 5433 2755 152 35 106 chr10 27126388 27127132 -118462156 - LTR8 LTR ERV1 0 691 1 2574 222 118 36 chr10 27127132 27127187 -118462101 - L1ME1 LINE L1 -733 5433 5384 921 212 0 0 chr10 27127187 27127352 -118461936 - FRAM SINE Alu 0 166 2 2574 222 118 36 chr10 27127352 27127761 -118461527 - L1ME1 LINE L1 -782 5384 5010 2366 109 64 12 chr10 27127761 27128165 -118461123 - MSTA LTR MaLR -3 425 1 2574 222 118 36 chr10 27128165 27128749 -118460539 - L1ME1 LINE L1 -1156 5010 4161 6412 146 9 7 chr10 27128768 27130862 -118458426 - L1MA2 LINE L1 -1 7722 5620 4163 188 58 21 chr10 27130868 27132158 -118457130 - L1MA2 LINE L1 -2807 4758 3415 * 8118 118 82 5 chr10 27132150 27132892 -118456396 - L1MA2 LINE L1 -5029 2536 1853 198 0 0 0 chr10 27132892 27132914 -118456374 + (TC)n Simple_repeat Simple_repeat 2 23 0 8118 118 82 5 chr10 27132914 27133507 -118455781 - L1MA2 LINE L1 -5712 1853 1097 405 105 18 0 chr10 27133681 27133738 -118455550 - AluSp SINE Alu -122 191 134 1126 128 0 21 chr10 27133738 27133926 -118455362 - AluSg/x SINE Alu -8 304 121 216 129 16 32 chr10 27134078 27134140 -118455148 + CT-rich Low_complexity Low_complexity 2 62 0 216 355 16 13 chr10 27134166 27134362 -118454926 + CT-rich Low_complexity Low_complexity 1 196 0 242 254 17 34 chr10 27134537 27134655 -118454633 + CT-rich Low_complexity Low_complexity 5 120 0 870 180 47 55 chr10 27134776 27135032 -118454256 + pTR5 LTR ERV1 1774 2027 -411 321 202 32 21 chr10 27135034 27135128 -118454160 + LTR30 LTR ERV1 548 642 -80 1649 99 152 4 chr10 27135129 27135451 -118453837 + LTR12 LTR ERV1 375 714 0 2002 112 3 17 chr10 27135455 27135762 -118453526 + AluSx SINE Alu 1 303 0 223 321 12 12 chr10 27135878 27135962 -118453326 + MIR SINE MIR 8 91 -171 352 80 0 0 chr10 27135977 27136027 -118453261 + MADE1 DNA Mariner 25 74 -6 304 269 28 28 chr10 27136035 27136143 -118453145 + MIR SINE MIR 117 224 -38 519 173 144 0 chr10 27136783 27136887 -118452401 + Tigger1 DNA MER2_type 2299 2417 -1 2142 248 61 40 chr10 27136896 27137016 -118452272 + L1M4 LINE L1 356 472 -6070 2265 77 3 7 chr10 27137016 27137303 -118451985 + AluSc SINE Alu 1 286 -23 2142 248 61 40 chr10 27137303 27137925 -118451363 + L1M4 LINE L1 472 1113 -5429 488 226 99 28 chr10 27137933 27138145 -118451143 + L1M4 LINE L1 1536 1762 -4884 276 128 0 0 chr10 27138274 27138321 -118450967 - HERVH LTR ERV1 -2067 5646 5600 7845 112 2 1 chr10 27138322 27139506 -118449782 - HERVH LTR ERV1 -2287 4242 3962 3556 173 41 2 chr10 27139799 27140435 -118448853 - L1M1 LINE L1 -6889 676 16 4180 254 64 14 chr10 27140458 27142586 -118446702 - L1MEc LINE L1 -1998 4217 2010 2427 302 87 25 chr10 27142587 27143378 -118445910 - L1MEc LINE L1 -4432 1964 1224 1929 130 3 50 chr10 27143378 27143712 -118445576 - AluSc SINE Alu 0 309 1 2427 302 87 25 chr10 27143712 27144717 -118444571 - L1MEc LINE L1 -5172 1224 55 967 244 46 34 chr10 27145399 27146081 -118443207 + L1M4 LINE L1 1797 2578 -4068 257 46 132 34 chr10 27146088 27146149 -118443139 - MLT2A1 LTR ERVL 0 453 388 202 108 77 0 chr10 27146241 27146306 -118442982 + (TATAA)n Simple_repeat Simple_repeat 5 74 0 2822 69 23 5 chr10 27146332 27146725 -118442563 - MLT2A1 LTR ERVL -44 400 1 3945 243 29 30 chr10 27146725 27148299 -118440989 + L1M4 LINE L1 2580 4152 -2492 1665 164 82 37 chr10 27148304 27148531 -118440757 + L1MC3 LINE L1 7358 7612 -173 2565 66 0 0 chr10 27148531 27148835 -118440453 + AluY SINE Alu 1 304 -7 1665 164 82 37 chr10 27148835 27149010 -118440278 + L1MC3 LINE L1 7612 7778 -7 1394 188 68 34 chr10 27149319 27149447 -118439841 + AluJo SINE Alu 3 125 -187 414 0 0 0 chr10 27149447 27149493 -118439795 + (TAA)n Simple_repeat Simple_repeat 2 47 0 1394 188 68 34 chr10 27149493 27149657 -118439631 + AluJo SINE Alu 125 305 -7 716 61 0 10 chr10 27149674 27149773 -118439515 + (GGAA)n Simple_repeat Simple_repeat 3 100 0 22 35 0 0 chr10 27150865 27150894 -118438394 + AT_rich Low_complexity Low_complexity 1 29 0 31 44 0 0 chr10 27152718 27152763 -118436525 + AT_rich Low_complexity Low_complexity 1 45 0 2039 128 62 0 chr10 27153120 27153408 -118435880 - AluSx SINE Alu -6 306 1 917 184 168 76 chr10 27153709 27154104 -118435184 - MLT2B1 LTR ERVL -53 501 1 2293 108 0 3 chr10 27154704 27155030 -118434258 - AluSq SINE Alu 0 313 1 466 245 63 106 chr10 27155043 27155374 -118433914 - L2 LINE L2 -64 3249 2933 3408 305 128 30 chr10 27155418 27155539 -118433749 - L2 LINE L2 0 3313 3205 2209 106 41 52 chr10 27155539 27155907 -118433381 + THE1B LTR MaLR 1 364 0 3408 305 128 30 chr10 27155907 27157553 -118431735 - L2 LINE L2 -108 3205 1279 2103 155 19 14 chr10 27157553 27157915 -118431373 + THE1B LTR MaLR 1 364 0 3408 305 128 30 chr10 27157915 27158290 -118430998 - L2 LINE L2 -2034 1279 942 2032 159 3 0 chr10 27158299 27158607 -118430681 + AluSx SINE Alu 1 309 -3 236 360 7 4 chr10 27159007 27159170 -118430118 + C-rich Low_complexity Low_complexity 2 276 0 183 158 12 37 chr10 27159181 27159263 -118430025 + (CAG)n Simple_repeat Simple_repeat 1 80 0 754 39 0 19 chr10 27159274 27159378 -118429910 + (GAA)n Simple_repeat Simple_repeat 1 102 0 209 306 0 0 chr10 27159481 27159530 -118429758 + polypyrimidine Low_complexity Low_complexity 3 51 0 873 108 0 14 chr10 27160506 27160645 -118428643 + LTR7 LTR ERV1 312 448 -2 1320 252 72 20 chr10 27160645 27161244 -118428044 + L1M4 LINE L1 4233 4862 -1284 402 213 110 8 chr10 27161711 27161838 -118427450 + MER39B LTR ERV1 5 144 -509 834 173 7 7 chr10 27161838 27161988 -118427300 + AluSq/x SINE Alu 1 150 -162 372 157 12 12 chr10 27162018 27162101 -118427187 + GA-rich Low_complexity Low_complexity 3 85 0 1019 88 18 12 chr10 27162101 27162272 -118427016 + (GGAA)n Simple_repeat Simple_repeat 4 175 0 365 224 31 0 chr10 27162346 27162444 -118426844 + MER39B LTR ERV1 137 237 -416 24 32 0 0 chr10 27162444 27162475 -118426813 + AT_rich Low_complexity Low_complexity 1 31 0 792 133 0 0 chr10 27162475 27162588 -118426700 - FLAM_C SINE Alu -16 117 5 2427 129 9 14 chr10 27162600 27163019 -118426269 + MER39B LTR ERV1 232 648 -5 2201 103 3 0 chr10 27163198 27163521 -118425767 - AluSx SINE Alu 0 324 1 494 228 12 18 chr10 27164116 27164287 -118425001 + CT-rich Low_complexity Low_complexity 4 173 0 2586 116 6 0 chr10 27164298 27164660 -118424628 + THE1B LTR MaLR 1 364 0 229 218 26 0 chr10 27164672 27164750 -118424538 + CT-rich Low_complexity Low_complexity 2 81 0 2826 167 78 15 chr10 27164827 27165433 -118423855 - LTR48B LTR ERV1 0 644 1 1792 102 110 0 chr10 27165540 27165832 -118423456 - AluSx SINE Alu 0 320 1 482 248 117 7 chr10 27166051 27166196 -118423092 + MIR SINE MIR 95 255 -7 1892 169 3 0 chr10 27166314 27166610 -118422678 - AluJo SINE Alu -15 297 1 1344 141 4 4 chr10 27166684 27166911 -118422377 + L1MA4A LINE L1 6066 6292 -11 2764 82 20 5 chr10 27167391 27167783 -118421505 + L1PA10 LINE L1 5767 6164 -4 192 200 0 0 chr10 27168274 27168334 -118420954 + A-rich Low_complexity Low_complexity 1 60 0 1911 199 28 114 chr10 27168399 27169068 -118420220 - LTR9 LTR ERV1 0 612 1 309 264 0 11 chr10 27169197 27169288 -118420000 - L1ME2 LINE L1 -180 5984 5895 581 197 78 0 chr10 27169384 27169526 -118419762 + L1M4 LINE L1 4699 4851 -1295 4474 175 18 28 chr10 27169530 27170818 -118418470 - L1MB4 LINE L1 0 6180 4907 438 190 30 30 chr10 27170822 27170922 -118418366 + L1M4 LINE L1 4844 4943 -1203 1172 129 21 5 chr10 27170954 27171147 -118418141 + THE1C LTR MaLR 121 316 -59 928 98 0 8 chr10 27171147 27171270 -118418018 + AluSq/x SINE Alu 1 122 -191 222 37 0 0 chr10 27171270 27171297 -118417991 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 509 61 0 0 chr10 27171297 27171363 -118417925 + THE1C LTR MaLR 308 373 -2 2406 112 0 0 chr10 27171419 27171731 -118417557 + AluSx SINE Alu 1 312 0 4016 215 45 15 chr10 27171752 27173495 -118415793 + L1MB5 LINE L1 4364 6165 -9 450 276 16 0 chr10 27173479 27173671 -118415617 + L1M4 LINE L1 5135 5329 -817 * 992 234 23 69 chr10 27173678 27174028 -118415260 + L1M4 LINE L1 16 349 -6193 13914 121 34 1 chr10 27174028 27176265 -118413023 + Tigger1 DNA MER2_type 1 2309 -109 1835 163 3 3 chr10 27176265 27176554 -118412734 - AluJo SINE Alu -13 299 11 15937 100 18 26 chr10 27176809 27179429 -118409859 - HERVH LTR ERV1 -5112 2601 1 2675 95 92 5 chr10 27179431 27179843 -118409445 - LTR7 LTR ERV1 -2 448 1 3263 231 96 34 chr10 27179843 27181316 -118407972 - L1MB4 LINE L1 -1907 4239 2675 295 133 100 0 chr10 27181322 27181382 -118407906 - MLT1B LTR MaLR 0 390 325 2221 118 10 0 chr10 27181382 27181688 -118407600 + AluSx SINE Alu 1 309 -3 445 169 52 0 chr10 27182072 27182149 -118407139 + MER2 DNA MER2_type 1 81 -264 1176 138 57 29 chr10 27182243 27182489 -118406799 + MER2 DNA MER2_type 93 345 0 2083 121 3 0 chr10 27182511 27182851 -118406437 + AluSq SINE Alu 1 341 0 2099 97 3 17 chr10 27183104 27183423 -118405865 - AluSq SINE Alu 0 315 1 1751 134 8 85 chr10 27184016 27184382 -118404906 - MER44D DNA MER2_type -1 608 1 2724 128 16 5 chr10 27184430 27184853 -118404435 + MSTA LTR MaLR 1 428 0 1436 131 29 48 chr10 27184903 27185310 -118403978 + MLT1C LTR MaLR 1 390 0 234 229 66 0 chr10 27185539 27185600 -118403688 - MIR3 SINE MIR -36 172 108 2314 114 48 11 chr10 27185763 27186114 -118403174 + THE1B LTR MaLR 1 364 0 2106 138 0 3 chr10 27186292 27186597 -118402691 + AluSc SINE Alu 1 304 -5 1583 208 54 3 chr10 27186736 27187107 -118402181 + MLT1B LTR MaLR 1 390 0 456 19 0 0 chr10 27187286 27187339 -118401949 + (CA)n Simple_repeat Simple_repeat 2 54 0 1277 183 28 20 chr10 27187812 27188277 -118401011 + MLT1D LTR MaLR 1 505 0 1458 135 15 132 chr10 27189320 27189661 -118399627 - AluJo SINE Alu -1 301 1 423 304 31 6 chr10 27190509 27190670 -118398618 + MIR SINE MIR 12 176 -86 330 73 0 0 chr10 27190796 27190837 -118398451 - MSTA LTR MaLR 0 426 386 2305 99 3 13 chr10 27190837 27191149 -118398139 + AluSc SINE Alu 1 309 0 1978 150 94 19 chr10 27191169 27191542 -118397746 - MSTA LTR MaLR -27 401 1 432 241 80 55 chr10 27192127 27192203 -118397085 - MIR SINE MIR -3 259 186 2001 115 45 3 chr10 27192203 27192489 -118396799 - AluSx SINE Alu -6 306 9 432 241 80 55 chr10 27192489 27192611 -118396677 - MIR SINE MIR -76 186 56 985 230 231 17 chr10 27192693 27192750 -118396538 - MLT1F1 LTR MaLR -8 559 516 2265 98 0 3 chr10 27192750 27193047 -118396241 + AluSc SINE Alu 4 299 -10 985 230 231 17 chr10 27193047 27193446 -118395842 - MLT1F1 LTR MaLR -51 516 1 531 128 47 0 chr10 27193618 27193704 -118395584 + FLAM_A SINE Alu 36 125 -17 1209 136 121 0 chr10 27193866 27194065 -118395223 - AluSg/x SINE Alu -5 305 83 2076 109 13 7 chr10 27194798 27195102 -118394186 + AluSx SINE Alu 1 306 -6 2280 110 0 0 chr10 27195755 27196055 -118393233 + AluSq SINE Alu 1 300 -13 1817 266 67 19 chr10 27196061 27196684 -118392604 - MER115 DNA AcHobo -40 653 1 252 219 0 41 chr10 27197033 27197106 -118392182 + L2 LINE L2 2794 2863 -451 218 122 14 54 chr10 27197286 27197360 -118391928 + (CCCCCG)n Simple_repeat Simple_repeat 5 75 0 5873 83 17 1 chr10 27197791 27198575 -118390713 - L1PA10 LINE L1 0 6168 5373 407 244 148 0 chr10 27198678 27198813 -118390475 - MLT1J LTR MaLR -349 162 8 23 0 0 0 chr10 27198950 27198973 -118390315 + AT_rich Low_complexity Low_complexity 1 23 0 517 286 84 10 chr10 27199187 27199390 -118389898 + MIR SINE MIR 32 249 -13 207 0 0 0 chr10 27199400 27199423 -118389865 + (CA)n Simple_repeat Simple_repeat 1 23 0 228 67 0 0 chr10 27199647 27199677 -118389611 + (T)n Simple_repeat Simple_repeat 1 30 0 190 240 20 20 chr10 27199768 27199818 -118389470 + MIR SINE MIR 71 120 -88 21 0 0 0 chr10 27199871 27199892 -118389396 + AT_rich Low_complexity Low_complexity 1 21 0 222 282 12 12 chr10 27200770 27200855 -118388433 - MIR SINE MIR -26 236 152 201 74 0 0 chr10 27201906 27201933 -118387355 + (CCTA)n Simple_repeat Simple_repeat 1 27 0 1715 164 4 7 chr10 27202060 27202334 -118386954 + AluJo SINE Alu 16 288 -24 1537 202 50 23 chr10 27202987 27203329 -118385959 + LTR53 LTR ERVL 3 353 -166 892 174 30 42 chr10 27203558 27203633 -118385655 - FRAM SINE Alu -149 163 89 8440 71 4 6 chr10 27203633 27204706 -118384582 + MER11C LTR ERVK 1 1071 0 892 174 30 42 chr10 27204706 27204797 -118384491 - FRAM SINE Alu -223 89 1 1043 111 0 0 chr10 27204876 27205011 -118384277 + AluSq/x SINE Alu 1 135 -178 2185 132 3 0 chr10 27205011 27205321 -118383967 + AluSx SINE Alu 1 311 -1 250 262 191 14 chr10 27205377 27205518 -118383770 + MER5A DNA MER1_type 1 166 -23 281 33 33 49 chr10 27206179 27206240 -118383048 + (TTTTA)n Simple_repeat Simple_repeat 2 61 0 1779 165 11 0 chr10 27206243 27206522 -118382766 - AluSx SINE Alu -30 282 1 208 239 0 0 chr10 27206561 27206607 -118382681 + MER5B DNA MER1_type 1 46 -132 238 219 0 0 chr10 27206643 27206684 -118382604 - MLT2B1 LTR ERVL 0 515 475 427 113 0 0 chr10 27206730 27206792 -118382496 + MADE1 DNA Mariner 1 62 -18 1484 236 92 7 chr10 27206799 27207232 -118382056 - MLT2B1 LTR ERVL -50 470 1 614 218 30 69 chr10 27207232 27207364 -118381924 + MIR SINE MIR 69 192 -70 1734 162 34 27 chr10 27207364 27207660 -118381628 + AluJb SINE Alu 1 298 -14 614 218 30 69 chr10 27207660 27207729 -118381559 + MIR SINE MIR 192 262 0 201 341 11 34 chr10 27207780 27207868 -118381420 - MER5A DNA MER1_type -98 91 6 804 321 84 26 chr10 27207906 27208479 -118380809 + Charlie7 DNA MER1_type 71 676 -1936 1525 156 4 42 chr10 27208520 27208783 -118380505 + AluJo SINE Alu 6 258 -54 315 0 0 0 chr10 27208787 27208822 -118380466 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 250 180 33 16 chr10 27209718 27209779 -118379509 - MER116 DNA Mariner 0 80 19 460 329 66 0 chr10 27210107 27210320 -118378968 + MARNA DNA Mariner 18 244 -342 1616 179 10 35 chr10 27211076 27211389 -118377899 - AluJo SINE Alu -7 305 1 674 209 8 8 chr10 27213913 27214047 -118375241 + AluSg/x SINE Alu 164 297 -15 1307 185 0 13 chr10 27214047 27214274 -118375014 + AluSx SINE Alu 1 224 -88 967 251 110 28 chr10 27214390 27214716 -118374572 - MLT1A1 LTR MaLR -12 353 1 739 288 88 23 chr10 27215258 27215644 -118373644 - LTR16C LTR ERVL -9 482 72 387 0 0 0 chr10 27216802 27216845 -118372443 + (A)n Simple_repeat Simple_repeat 1 43 0 392 254 45 30 chr10 27217568 27217702 -118371586 + MIR SINE MIR 109 244 -18 191 323 73 16 chr10 27218393 27218517 -118370771 + MER5A DNA MER1_type 40 170 -19 252 45 27 100 chr10 27218861 27218971 -118370317 + (TA)n Simple_repeat Simple_repeat 1 102 0 212 130 57 24 chr10 27219035 27219158 -118370130 + (TATAG)n Simple_repeat Simple_repeat 4 130 0 214 172 69 23 chr10 27219158 27219245 -118370043 + (CTATA)n Simple_repeat Simple_repeat 1 91 0 222 116 43 67 chr10 27219245 27219409 -118369879 + (TA)n Simple_repeat Simple_repeat 1 160 0 603 284 74 9 chr10 27219538 27219977 -118369311 - L2 LINE L2 -161 3152 2678 303 244 24 0 chr10 27220412 27220494 -118368794 + CT-rich Low_complexity Low_complexity 2 85 0 2094 194 35 30 chr10 27220656 27221119 -118368169 - MLT1D LTR MaLR -38 467 3 207 0 0 0 chr10 27221460 27221483 -118367805 + (A)n Simple_repeat Simple_repeat 1 23 0 321 278 19 28 chr10 27221618 27221726 -118367562 + MLT1G1 LTR MaLR 258 364 -231 2573 132 18 34 chr10 27223775 27223909 -118365379 - L1PA16 LINE L1 -13 6153 6018 2061 138 0 3 chr10 27223909 27224220 -118365068 - AluSq SINE Alu -3 310 1 2573 132 18 34 chr10 27224220 27224523 -118364765 - L1PA16 LINE L1 -148 6018 5723 899 296 157 14 chr10 27225069 27225854 -118363434 + L2 LINE L2 36 932 -2382 278 347 95 12 chr10 27226225 27226467 -118362821 - L2 LINE L2 -18 3254 2993 216 0 0 0 chr10 27227067 27227091 -118362197 + (TC)n Simple_repeat Simple_repeat 1 24 0 * 333 62 0 0 chr10 27227090 27227138 -118362150 + (CA)n Simple_repeat Simple_repeat 1 48 0 244 205 26 39 chr10 27227345 27227423 -118361865 + (CATATA)n Simple_repeat Simple_repeat 4 80 0 2369 149 41 12 chr10 27228598 27229014 -118360274 + MSTA LTR MaLR 1 428 0 1486 196 22 10 chr10 27229024 27229336 -118359952 + MLT1B LTR MaLR 1 316 -74 202 375 164 0 chr10 27230649 27230777 -118358511 - L2 LINE L2 -1 3271 3123 192 287 189 7 chr10 27230853 27230996 -118358292 - MIR3 SINE MIR -13 195 27 2499 84 55 3 chr10 27231027 27231371 -118357917 + THE1B LTR MaLR 3 364 0 864 238 14 19 chr10 27231827 27232037 -118357251 + MER63A DNA MER1_type 2 210 0 3665 100 22 0 chr10 27232241 27232742 -118356546 + MER75 DNA T2_type 1 512 -2 1314 207 78 15 chr10 27233085 27233141 -118356147 + MLT1A1 LTR MaLR 11 62 -303 4281 80 2 18 chr10 27233141 27233704 -118355584 - MER41A LTR ERV1 0 554 1 1314 207 78 15 chr10 27233704 27233981 -118355307 + MLT1A1 LTR MaLR 62 365 0 3021 120 87 4 chr10 27234156 27234616 -118354672 - MER41E LTR ERV1 0 512 15 2782 174 29 57 chr10 27235352 27235968 -118353320 + LTR9 LTR ERV1 14 612 0 183 156 0 0 chr10 27236347 27236379 -118352909 + (TG)n Simple_repeat Simple_repeat 2 33 0 186 311 155 0 chr10 27239094 27239197 -118350091 + MIR3 SINE MIR 84 202 -6 287 316 76 13 chr10 27239746 27239904 -118349384 - MIR SINE MIR -47 215 48 1578 153 96 3 chr10 27240006 27240288 -118349000 + AluSq SINE Alu 1 308 -5 1146 60 0 78 chr10 27240346 27240512 -118348776 + AluY SINE Alu 1 153 -158 2685 66 0 6 chr10 27240514 27240863 -118348425 - LTR7 LTR ERV1 -2 448 102 1792 94 64 0 chr10 27240865 27241131 -118348157 - HERVH LTR ERV1 -109 7604 7322 1349 117 42 9 chr10 27241129 27241342 -118347946 - HERVH LTR ERV1 -1894 5819 5600 * 3923 145 14 3 chr10 27241343 27241998 -118347290 - HERVH LTR ERV1 -2564 5149 4488 3198 117 0 6 chr10 27242000 27242505 -118346783 - HERVH LTR ERV1 -3720 3993 3492 867 140 7 0 chr10 27242495 27242645 -118346643 - HERVH LTR ERV1 -4423 3290 3140 * 9408 100 10 8 chr10 27242639 27244085 -118345203 - HERVH LTR ERV1 -4726 2987 1540 8102 169 60 21 chr10 27244101 27245992 -118343296 - HERVH LTR ERV1 -4819 1835 1 3188 62 0 70 chr10 27245994 27246476 -118342812 - LTR7 LTR ERV1 -2 448 1 919 117 14 0 chr10 27246499 27246644 -118342644 + AluY SINE Alu 157 303 -8 197 276 31 61 chr10 27246693 27246791 -118342497 + L2 LINE L2 3125 3219 -94 241 195 0 0 chr10 27246792 27246833 -118342455 + MER63 DNA MER1_type 1 41 -395 264 222 222 0 chr10 27246958 27247039 -118342249 + L2 LINE L2 3212 3310 -3 4297 152 19 24 chr10 27247086 27247236 -118342052 + LTR39 LTR ERV1 1 150 -633 1629 227 44 75 chr10 27247236 27247867 -118341421 - LTR9 LTR ERV1 0 612 1 4297 152 19 24 chr10 27247867 27248495 -118340793 + LTR39 LTR ERV1 150 775 -8 187 347 0 20 chr10 27249009 27249058 -118340230 + L2 LINE L2 3136 3183 -89 685 273 108 0 chr10 27249388 27249564 -118339724 + MIR SINE MIR 17 211 -51 1744 171 0 54 chr10 27249570 27249886 -118339402 + AluJb SINE Alu 1 299 -13 392 352 51 15 chr10 27250342 27250538 -118338750 + MIR3 SINE MIR 1 203 -5 1591 208 0 16 chr10 27250603 27250906 -118338382 - AluJo SINE Alu -14 298 1 2433 136 62 5 chr10 27251424 27251829 -118337459 - MSTA LTR MaLR 0 428 1 351 271 41 41 chr10 27251965 27252135 -118337153 - L1ME4a LINE L1 -1 6120 5951 1649 154 3 28 chr10 27252159 27252472 -118336816 - AluJo SINE Alu 0 310 5 2336 110 0 0 chr10 27252510 27252820 -118336468 - AluSx SINE Alu -2 310 1 3971 157 27 10 chr10 27252969 27253663 -118335625 - MER39 LTR ERV1 -1 706 1 637 261 10 24 chr10 27253663 27253861 -118335427 - L1ME4a LINE L1 -312 5809 5613 2251 115 3 10 chr10 27255933 27256247 -118333041 - AluSx SINE Alu 0 312 1 2275 91 7 0 chr10 27257283 27257580 -118331708 - AluY SINE Alu -12 299 1 1886 128 14 27 chr10 27258279 27258575 -118330713 + AluSq SINE Alu 13 304 -9 711 129 39 7 chr10 27258589 27258744 -118330544 + GA-rich Low_complexity Low_complexity 1 160 0 372 321 68 0 chr10 27259406 27259568 -118329720 - MER5A DNA MER1_type -14 175 3 421 268 71 0 chr10 27260006 27260133 -118329155 - MIR SINE MIR -98 164 29 2266 128 3 0 chr10 27260244 27260556 -118328732 - AluSq SINE Alu 0 313 1 1651 174 24 27 chr10 27262129 27262457 -118326831 - AluJo SINE Alu 0 332 6 342 266 21 11 chr10 27262866 27262960 -118326328 + GA-rich Low_complexity Low_complexity 2 96 0 2100 166 41 37 chr10 27263026 27263109 -118326179 - L1MA4 LINE L1 -10 6290 6209 1710 153 7 24 chr10 27263109 27263397 -118325891 + AluJo SINE Alu 14 296 -16 2100 166 41 37 chr10 27263397 27263777 -118325511 - L1MA4 LINE L1 -91 6209 5825 222 227 0 0 chr10 27264436 27264480 -118324808 + (CATATA)n Simple_repeat Simple_repeat 2 45 0 194 253 95 53 chr10 27264484 27264579 -118324709 - L2 LINE L2 -5 3267 3169 233 217 0 0 chr10 27264787 27264833 -118324455 + (TGAA)n Simple_repeat Simple_repeat 3 48 0 2287 102 0 0 chr10 27264988 27265282 -118324006 + AluSx SINE Alu 1 294 -18 1144 203 72 51 chr10 27265406 27265834 -118323454 - LTR56 LTR ERV1 0 445 9 1984 155 49 45 chr10 27266851 27267296 -118321992 - MER67A LTR ERV1 0 543 97 2925 74 14 61 chr10 27267316 27267761 -118321527 + L1PA10 LINE L1 5730 6153 -15 721 125 0 0 chr10 27267795 27267907 -118321381 - MER67A LTR ERV1 -431 112 1 685 353 12 4 chr10 27267927 27268185 -118321103 + MIR SINE MIR 3 262 0 214 127 0 36 chr10 27268565 27268620 -118320668 + (CAAAG)n Simple_repeat Simple_repeat 2 54 0 987 305 27 14 chr10 27268628 27268999 -118320289 - MLT1I LTR MaLR -8 401 26 5128 124 17 20 chr10 27269018 27269899 -118319389 - L1PA15 LINE L1 0 6165 5288 318 26 0 0 chr10 27270103 27270142 -118319146 + (CA)n Simple_repeat Simple_repeat 2 40 0 307 286 138 42 chr10 27270232 27270515 -118318773 + HAL1b LINE L1 505 814 -534 206 291 0 0 chr10 27270558 27270613 -118318675 - MIR SINE MIR -16 246 192 30 97 0 0 chr10 27270720 27270813 -118318475 + AT_rich Low_complexity Low_complexity 1 93 0 1624 193 3 32 chr10 27270815 27271131 -118318157 - AluJo SINE Alu -5 307 1 1233 194 41 116 chr10 27271153 27271833 -118317455 + Zaphod DNA AcHobo 816 1444 -2587 272 258 15 0 chr10 27271831 27271897 -118317391 + Zaphod DNA AcHobo 3964 4030 -1 * 1453 28 4 173 chr10 27272036 27272290 -118316998 + L1PA5 LINE L1 5935 6145 -9 21 0 0 0 chr10 27272665 27272686 -118316602 + AT_rich Low_complexity Low_complexity 1 21 0 181 198 22 0 chr10 27272898 27272989 -118316299 + A-rich Low_complexity Low_complexity 1 93 0 454 281 57 46 chr10 27273279 27273542 -118315746 + L1MC4a LINE L1 3243 3508 -2638 227 123 41 14 chr10 27273692 27273765 -118315523 + (TA)n Simple_repeat Simple_repeat 2 76 0 454 282 93 46 chr10 27273846 27274343 -118314945 + L1MC4a LINE L1 3731 4250 -1896 307 185 46 15 chr10 27274521 27274586 -118314702 - MER20 DNA MER1_type -152 67 1 390 286 71 0 chr10 27274586 27274740 -118314548 + L1MC4a LINE L1 5737 5901 -1907 21 36 0 0 chr10 27275823 27275851 -118313437 + AT_rich Low_complexity Low_complexity 1 28 0 1817 108 46 26 chr10 27276584 27276680 -118312608 + Tigger2a DNA MER2_type 1 94 -2614 204 40 0 0 chr10 27276680 27276705 -118312583 + (TCC)n Simple_repeat Simple_repeat 2 26 0 1817 108 46 26 chr10 27276705 27276914 -118312374 + Tigger2a DNA MER2_type 94 312 -122 3168 131 43 8 chr10 27276914 27277045 -118312243 - MER41C LTR ERV1 0 554 429 2086 134 47 33 chr10 27277045 27277404 -118311884 + THE1B LTR MaLR 1 364 0 3168 131 43 8 chr10 27277404 27277807 -118311481 - MER41C LTR ERV1 -125 429 1 248 146 0 0 chr10 27277807 27277846 -118311442 + Tigger2a DNA MER2_type 309 347 -87 2195 84 3 0 chr10 27277846 27278131 -118311157 - AluSx SINE Alu -26 286 1 248 252 117 9 chr10 27278270 27278484 -118310804 - L1M4 LINE L1 -2949 3197 2961 427 321 17 7 chr10 27278848 27279144 -118310144 - L1M4 LINE L1 -3584 2562 2264 24 32 0 0 chr10 27279236 27279267 -118310021 + AT_rich Low_complexity Low_complexity 1 31 0 884 234 24 19 chr10 27279435 27279644 -118309644 - MIR SINE MIR 0 262 53 513 319 42 25 chr10 27279648 27279933 -118309355 + L1M4 LINE L1 5023 5312 -834 2470 53 0 3 chr10 27280859 27281158 -118308130 + AluY SINE Alu 1 298 -13 1712 158 3 7 chr10 27281376 27281684 -118307604 - AluSq SINE Alu 0 307 1 237 307 13 0 chr10 27283150 27283225 -118306063 - L3 LINE CR1 -1 1576 1501 233 222 16 16 chr10 27283249 27283312 -118305976 + CT-rich Low_complexity Low_complexity 2 64 0 270 0 0 0 chr10 27283312 27283342 -118305946 + (CA)n Simple_repeat Simple_repeat 1 30 0 227 332 173 29 chr10 27283346 27283554 -118305734 - L3 LINE CR1 -222 1355 1118 551 136 117 0 chr10 27284179 27284282 -118305006 - 5S rRNA rRNA -6 115 1 321 294 137 33 chr10 27284423 27284576 -118304712 - L2 LINE L2 -2 3270 3102 193 323 187 59 chr10 27284952 27285011 -118304277 - L2 LINE L2 -638 2676 2626 1965 153 7 17 chr10 27285011 27285311 -118303977 + AluJo SINE Alu 1 297 -15 193 323 187 59 chr10 27285311 27285626 -118303662 - L2 LINE L2 -688 2626 2254 307 346 43 14 chr10 27287764 27287972 -118301316 + MIR SINE MIR 8 221 -41 186 282 0 0 chr10 27288732 27288771 -118300517 + MER5B DNA MER1_type 11 49 -129 370 328 8 8 chr10 27288802 27288927 -118300361 + MER5B DNA MER1_type 52 176 -2 794 286 54 41 chr10 27289142 27289684 -118299604 + L2 LINE L2 2733 3276 -37 425 125 0 0 chr10 27289727 27289791 -118299497 - U6 snRNA snRNA -43 64 1 23 0 0 0 chr10 27290013 27290036 -118299252 + AT_rich Low_complexity Low_complexity 1 23 0 2155 114 0 3 chr10 27290036 27290352 -118298936 - L1PB1 LINE L1 -1 6150 5836 489 76 0 0 chr10 27291893 27291959 -118297329 + (TG)n Simple_repeat Simple_repeat 2 67 0 2172 87 18 0 chr10 27291962 27292239 -118297049 - AluSq SINE Alu -31 282 1 1089 140 95 20 chr10 27292462 27292662 -118296626 - AluJo SINE Alu -12 300 86 259 348 62 18 chr10 27292983 27293095 -118296193 - MIR SINE MIR -73 135 19 2177 128 0 0 chr10 27293149 27293453 -118295835 - AluSx SINE Alu -8 304 1 244 255 0 0 chr10 27293903 27293950 -118295338 - MER91 DNA MER1_type -76 64 18 859 135 0 0 chr10 27293990 27294116 -118295172 - FLAM_C SINE Alu -6 127 2 335 275 13 0 chr10 27294176 27294262 -118295026 + MIR SINE MIR 57 143 -65 2006 161 105 10 chr10 27294349 27294740 -118294548 - MSTA LTR MaLR 0 428 1 761 187 13 20 chr10 27295578 27295728 -118293560 + MIR SINE MIR 41 189 -73 1981 143 3 13 chr10 27296497 27296811 -118292477 + AluY SINE Alu 1 311 0 9647 179 31 21 chr10 27296855 27298812 -118290476 - ERVL LTR ERVL -338 5426 3451 2881 206 43 22 chr10 27298957 27299559 -118289729 - ERVL LTR ERVL -4274 1490 902 3531 195 26 83 chr10 27299559 27300586 -118288702 + LTR5 LTR ERVK 1 969 0 1972 126 55 30 chr10 27300586 27300952 -118288336 - THE1C LTR MaLR 0 375 1 2881 206 43 22 chr10 27300952 27301018 -118288270 - ERVL LTR ERVL -4861 903 807 726 247 38 4 chr10 27301050 27301285 -118288003 + L1ME3A LINE L1 5758 6000 -170 493 120 27 0 chr10 27301815 27301890 -118287398 + AluSg/x SINE Alu 206 282 -30 180 0 0 0 chr10 27301898 27301918 -118287370 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 1791 126 66 3 chr10 27302134 27302420 -118286868 + AluSx SINE Alu 1 304 -8 3290 149 8 13 chr10 27303060 27303590 -118285698 - MER1A DNA MER1_type 0 527 1 838 205 13 0 chr10 27303674 27303830 -118285458 - FRAM SINE Alu -17 159 2 202 241 74 0 chr10 27304500 27304554 -118284734 - MIR SINE MIR -88 174 117 2381 53 0 0 chr10 27304588 27304927 -118284361 - AluY SINE Alu 0 339 1 278 267 12 12 chr10 27306280 27306366 -118282922 - MLT1I LTR MaLR 0 409 324 380 324 116 0 chr10 27306400 27306616 -118282672 - MLT1I LTR MaLR -152 257 17 395 128 0 13 chr10 27307072 27307150 -118282138 + (TTCCC)n Simple_repeat Simple_repeat 1 77 0 1636 85 5 0 chr10 27307697 27307909 -118281379 - AluSc SINE Alu -96 213 1 25 0 0 0 chr10 27308333 27308358 -118280930 + AT_rich Low_complexity Low_complexity 1 25 0 447 35 0 0 chr10 27310921 27310978 -118278310 + (CA)n Simple_repeat Simple_repeat 2 58 0 200 238 0 0 chr10 27311408 27311450 -118277838 + (TAAA)n Simple_repeat Simple_repeat 1 42 0 506 302 81 48 chr10 27311897 27312583 -118276705 + L1ME4a LINE L1 5317 6030 -91 375 233 175 0 chr10 27312583 27312686 -118276602 - FLAM_A SINE Alu -12 121 1 506 302 81 48 chr10 27312686 27312743 -118276545 + L1ME4a LINE L1 6030 6084 -37 1958 171 12 30 chr10 27312783 27313186 -118276102 + L1MA4A LINE L1 5902 6297 -6 23 54 0 0 chr10 27314566 27314603 -118274685 + AT_rich Low_complexity Low_complexity 1 37 0 617 144 126 27 chr10 27318273 27318384 -118270904 + FLAM_C SINE Alu 1 122 -21 1162 178 0 11 chr10 27318453 27318644 -118270644 + AluJo SINE Alu 95 283 -29 421 328 125 32 chr10 27319156 27319851 -118269437 + L1M4 LINE L1 2860 3619 -2527 271 146 0 0 chr10 27319944 27319985 -118269303 + Alu SINE Alu 1 41 -259 1629 133 4 0 chr10 27319985 27320218 -118269070 + AluSg/x SINE Alu 72 305 -5 428 295 125 57 chr10 27320291 27320732 -118268556 + L1M4 LINE L1 3807 4277 -1869 303 313 24 0 chr10 27322101 27322184 -118267104 + polypurine Low_complexity Low_complexity 1 85 0 393 129 0 0 chr10 27322234 27322304 -118266984 + (TTCCC)n Simple_repeat Simple_repeat 5 74 0 1365 156 107 42 chr10 27322310 27322599 -118266689 - AluJo SINE Alu -2 310 3 37 62 0 0 chr10 27322993 27323058 -118266230 + AT_rich Low_complexity Low_complexity 1 65 0 580 276 112 30 chr10 27323116 27323348 -118265940 - MIR SINE MIR 0 262 12 210 105 0 0 chr10 27323561 27323599 -118265689 + (T)n Simple_repeat Simple_repeat 1 38 0 207 0 0 0 chr10 27323642 27323665 -118265623 + (TTTTA)n Simple_repeat Simple_repeat 2 24 0 595 90 0 22 chr10 27323665 27323749 -118265539 - L1PA11 LINE L1 -11 6163 6081 1558 179 3 27 chr10 27323749 27324046 -118265242 - AluJo SINE Alu -22 290 1 21 0 0 0 chr10 27324599 27324620 -118264668 + AT_rich Low_complexity Low_complexity 1 21 0 900 197 0 13 chr10 27324896 27325048 -118264240 + FRAM SINE Alu 1 150 -16 330 250 95 60 chr10 27325087 27325228 -118264060 + L1MC4 LINE L1 7836 7987 -55 2150 122 42 31 chr10 27325228 27325588 -118263700 - THE1B LTR MaLR 0 364 1 330 250 95 60 chr10 27325588 27325646 -118263642 + L1MC4 LINE L1 7987 8042 0 198 0 0 0 chr10 27325748 27325770 -118263518 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 2050 133 3 0 chr10 27325773 27326058 -118263230 - AluSx SINE Alu -26 286 1 2469 67 0 3 chr10 27326301 27326613 -118262675 - AluY SINE Alu 0 311 1 529 200 50 0 chr10 27327864 27327984 -118261304 + MLT1D LTR MaLR 31 156 -349 228 93 23 0 chr10 27327987 27328030 -118261258 - MLT2A1 LTR ERVL -400 44 1 209 216 20 0 chr10 27328176 27328227 -118261061 + A-rich Low_complexity Low_complexity 5 56 0 1172 190 28 14 chr10 27328289 27328505 -118260783 - AluJb SINE Alu -35 277 59 608 151 0 0 chr10 27328507 27328600 -118260688 - AluJ/FLAM SINE Alu -219 93 1 661 224 174 20 chr10 27329320 27329516 -118259772 + MIR SINE MIR 13 238 -24 1740 212 94 113 chr10 27329773 27329861 -118259427 + MER97a DNA MER1_type? 9 97 -797 2354 91 0 3 chr10 27329861 27330157 -118259131 + AluY SINE Alu 1 295 -16 1740 212 94 113 chr10 27330157 27330238 -118259050 + MER97a DNA MER1_type? 97 178 -716 652 188 31 23 chr10 27330238 27330366 -118258922 + FLAM_A SINE Alu 5 133 0 1740 212 94 113 chr10 27330366 27331081 -118258207 + MER97a DNA MER1_type? 178 877 -17 2787 85 0 11 chr10 27331685 27332051 -118257237 + THE1B LTR MaLR 3 364 0 2078 154 0 0 chr10 27332542 27332848 -118256440 - AluSx SINE Alu -5 307 2 371 265 112 70 chr10 27332895 27333110 -118256178 - HAL1 LINE L1 -3 2504 2281 307 164 16 0 chr10 27333190 27333251 -118256037 - HAL1 LINE L1 -1166 1341 1280 2001 145 7 0 chr10 27333253 27333550 -118255738 - AluSq SINE Alu -13 300 2 24 32 0 0 chr10 27333557 27333588 -118255700 + AT_rich Low_complexity Low_complexity 1 31 0 888 92 33 0 chr10 27333662 27333782 -118255506 - AluSq/x SINE Alu -188 124 1 475 261 139 12 chr10 27333782 27333947 -118255341 - HAL1 LINE L1 -1220 1287 1102 257 260 0 0 chr10 27334729 27334802 -118254486 - HAL1 LINE L1 -826 1681 1609 308 270 81 45 chr10 27335002 27335113 -118254175 - HAL1 LINE L1 -1146 1361 1247 22 70 0 0 chr10 27335114 27335157 -118254131 + AT_rich Low_complexity Low_complexity 1 43 0 358 309 138 4 chr10 27335157 27335403 -118253885 + L1M4 LINE L1 4316 4594 -1552 261 191 29 0 chr10 27335592 27335660 -118253628 - L1M4 LINE L1 -994 5152 5083 411 32 81 0 chr10 27335663 27335725 -118253563 + MER41A LTR ERV1 400 466 -88 5624 213 35 62 chr10 27335761 27336376 -118252912 - L1M4 LINE L1 -1053 5093 4463 507 230 0 0 chr10 27336376 27336463 -118252825 - AluJ/FLAM SINE Alu -225 87 1 5624 213 35 62 chr10 27336463 27337525 -118251763 - L1M4 LINE L1 -1683 4463 3378 240 308 39 39 chr10 27338056 27338134 -118251154 - L2 LINE L2 0 3272 3195 2219 123 0 7 chr10 27338595 27338904 -118250384 - AluSg SINE Alu -3 307 1 403 278 26 92 chr10 27338905 27339202 -118250086 - L1MEc LINE L1 -975 1601 1411 5056 56 0 0 chr10 27339400 27340030 -118249258 + L1PA5 LINE L1 5525 6154 0 21 0 0 0 chr10 27340071 27340092 -118249196 + AT_rich Low_complexity Low_complexity 1 21 0 834 204 0 0 chr10 27340116 27340263 -118249025 + AluJb SINE Alu 137 283 -29 1951 131 3 13 chr10 27340356 27340662 -118248626 - AluSx SINE Alu -9 303 1 490 242 70 112 chr10 27342067 27342467 -118246821 - L1MC4 LINE L1 -21 8021 7640 1420 169 118 14 chr10 27342467 27342746 -118246542 - AluSg1 SINE Alu -1 308 1 490 242 70 112 chr10 27342746 27342791 -118246497 - L1MC4 LINE L1 -402 7640 7595 2053 135 0 0 chr10 27343339 27343635 -118245653 + AluY SINE Alu 2 297 -14 300 302 35 17 chr10 27343789 27343905 -118245383 - MIR SINE MIR -137 125 8 1375 191 64 0 chr10 27344496 27344747 -118244541 + Tigger7 DNA MER2_type 1 267 -466 562 124 31 21 chr10 27344774 27344871 -118244417 + MER4A LTR ERV1 1 98 -566 1756 119 182 27 chr10 27344871 27345206 -118244082 + MER4A LTR ERV1 261 647 -17 1038 176 32 68 chr10 27345814 27346035 -118243253 - MER20 DNA MER1_type 0 219 7 2517 126 22 0 chr10 27347777 27348133 -118241155 + THE1B LTR MaLR 1 364 0 545 193 7 0 chr10 27348133 27348268 -118241020 + CT-rich Low_complexity Low_complexity 3 138 0 583 317 16 20 chr10 27348274 27348577 -118240711 + MER39 LTR ERV1 237 538 -169 721 55 0 28 chr10 27350181 27350290 -118238998 + (TTCC)n Simple_repeat Simple_repeat 1 106 0 364 271 52 0 chr10 27350302 27350398 -118238890 - L2 LINE L2 -24 3289 3189 340 187 0 40 chr10 27350825 27350881 -118238407 + MADE1 DNA Mariner 1 55 -25 2252 103 10 0 chr10 27350881 27351181 -118238107 + AluSx SINE Alu 3 305 -7 340 187 0 40 chr10 27351181 27351199 -118238089 + MADE1 DNA Mariner 55 72 -8 228 200 11 21 chr10 27352283 27352378 -118236910 - MER5C DNA MER1_type -59 265 172 827 209 0 0 chr10 27352399 27352538 -118236750 + AluJb SINE Alu 135 273 -39 1574 222 60 21 chr10 27352569 27353042 -118236246 - MER39 LTR ERV1 0 707 11 248 182 169 0 chr10 27353051 27353128 -118236160 - MER5C DNA MER1_type -205 119 30 2960 117 30 26 chr10 27353276 27353606 -118235682 - MER4C LTR ERV1 0 465 131 1943 141 32 0 chr10 27353606 27353889 -118235399 - AluJb SINE Alu -20 292 1 2960 117 30 26 chr10 27353889 27354020 -118235268 - MER4C LTR ERV1 -334 131 2 255 339 14 26 chr10 27355076 27355228 -118234060 + MIR3 SINE MIR 1 149 -72 1990 150 3 3 chr10 27355241 27355541 -118233747 + AluJb SINE Alu 1 300 -12 1001 35 17 0 chr10 27356587 27356702 -118232586 - L1PA6 LINE L1 -7 6147 6031 258 35 0 0 chr10 27356706 27356735 -118232553 + L1P LINE L1 3557 3585 -2561 7536 44 33 0 chr10 27357172 27358102 -118231186 - L1PA7 LINE L1 -7 6147 5215 198 0 0 0 chr10 27358580 27358602 -118230686 + (TAAAA)n Simple_repeat Simple_repeat 5 26 0 250 305 37 0 chr10 27358678 27358760 -118230528 + MIR SINE MIR 161 245 -17 625 200 8 8 chr10 27359176 27359344 -118229944 - AluSc SINE Alu 0 349 182 1313 156 39 68 chr10 27359777 27360085 -118229203 + ERVL-D LTR ERVL 5459 5757 -7 1582 202 78 36 chr10 27360085 27360472 -118228816 + MLT2D LTR ERVL 1 403 -11 600 330 117 22 chr10 27360796 27361445 -118227843 - L1MEc LINE L1 -3306 2909 2199 1832 161 3 10 chr10 27362540 27362844 -118226444 + AluJb SINE Alu 1 302 -10 713 118 0 0 chr10 27364173 27364266 -118225022 + AluY SINE Alu 193 285 -26 821 270 54 0 chr10 27364270 27364492 -118224796 - MIR SINE MIR 0 262 29 618 156 0 0 chr10 27364571 27364661 -118224627 + AluJ/FLAM SINE Alu 2 91 -221 400 304 60 61 chr10 27364672 27365009 -118224279 - MLT1J LTR MaLR -82 533 115 2132 133 3 7 chr10 27365026 27365335 -118223953 + AluSg SINE Alu 1 308 -2 263 319 76 0 chr10 27365395 27365514 -118223774 - L1MEc LINE L1 -5724 672 545 326 398 14 0 chr10 27365589 27365800 -118223488 - L1MEc LINE L1 -6012 384 171 1652 199 67 105 chr10 27366161 27366816 -118222472 - LTR1B LTR ERV1 0 826 197 * 1762 183 3 6 chr10 27366811 27367133 -118222155 - LTR1B LTR ERV1 -505 321 1 23 54 0 0 chr10 27367144 27367181 -118222107 + AT_rich Low_complexity Low_complexity 1 37 0 216 67 0 0 chr10 27367238 27367268 -118222020 + (TTTTTG)n Simple_repeat Simple_repeat 3 32 0 673 255 109 5 chr10 27368386 27368570 -118220718 - MIR SINE MIR -6 256 54 328 390 17 0 chr10 27368720 27368838 -118220450 - L2 LINE L2 -10 3262 3143 628 248 0 0 chr10 27369025 27369146 -118220142 + FLAM_A SINE Alu 15 135 -7 274 300 20 67 chr10 27369612 27369762 -118219526 - MIR SINE MIR -74 188 46 2004 141 3 0 chr10 27369855 27370138 -118219150 + AluSx SINE Alu 1 284 -28 350 317 43 24 chr10 27370581 27370745 -118218543 + MIR SINE MIR 85 251 -11 1366 180 77 23 chr10 27372360 27372660 -118216628 + L1MC4 LINE L1 6782 7097 -945 2193 161 5 72 chr10 27372674 27373121 -118216167 + LTR9 LTR ERV1 1 417 -195 485 92 0 0 chr10 27373181 27373246 -118216042 - Alu SINE Alu -8 302 238 410 170 57 85 chr10 27373246 27373352 -118215936 + LTR9 LTR ERV1 515 779 0 2176 253 40 21 chr10 27373360 27373393 -118215895 + L1MC4 LINE L1 7266 7297 -745 4359 155 66 32 chr10 27373393 27374149 -118215139 - LTR39 LTR ERV1 -1 782 1 2176 253 40 21 chr10 27374149 27374786 -118214502 + L1MC4 LINE L1 7297 8042 0 345 314 175 11 chr10 27374924 27375198 -118214090 + L1ME4a LINE L1 5738 6056 -65 1334 233 149 20 chr10 27375428 27375918 -118213370 + LTR48B LTR ERV1 92 644 0 3000 83 92 2 chr10 27376980 27377391 -118211897 - LTR7 LTR ERV1 -2 448 1 366 284 117 12 chr10 27377411 27377573 -118211715 + MIR SINE MIR 84 262 0 856 300 163 33 chr10 27377722 27378581 -118210707 + L2 LINE L2 2358 3308 -5 668 251 70 70 chr10 27379145 27379444 -118209844 + LTR16A LTR ERVL 123 421 -29 2172 122 58 50 chr10 27379461 27379822 -118209466 + THE1B LTR MaLR 1 364 0 1823 160 39 15 chr10 27380144 27380475 -118208813 + MER44D DNA MER2_type 1 609 0 2396 125 36 23 chr10 27380490 27380875 -118208413 + MLT1B LTR MaLR 1 390 0 477 0 0 0 chr10 27381565 27381618 -118207670 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 34 24 0 0 chr10 27381618 27381659 -118207629 + AT_rich Low_complexity Low_complexity 1 41 0 5444 135 34 23 chr10 27382472 27383334 -118205954 - MER4D LTR ERV1 0 872 2 2754 117 0 14 chr10 27383668 27384037 -118205251 + THE1B LTR MaLR 1 364 0 10679 114 40 34 chr10 27384037 27385608 -118203680 + THE1B-int LTR MaLR 1 1580 0 2683 117 17 6 chr10 27385608 27385968 -118203320 + THE1B LTR MaLR 1 364 0 801 164 43 0 chr10 27386788 27386928 -118202360 - FRAM SINE Alu -30 146 1 2171 137 0 0 chr10 27386968 27387267 -118202021 - AluSx SINE Alu -13 299 1 188 268 0 0 chr10 27388098 27388139 -118201149 + MIR SINE MIR 196 236 -26 693 152 0 0 chr10 27388290 27388382 -118200906 + AluJ/FLAM SINE Alu 4 95 -217 403 241 12 0 chr10 27388382 27388544 -118200744 + (TA)n Simple_repeat Simple_repeat 1 164 0 2293 177 26 0 chr10 27388710 27389099 -118200189 - Tigger1 DNA MER2_type -2019 399 1 1046 155 0 0 chr10 27390420 27390581 -118198707 + FRAM SINE Alu 14 174 -2 3738 88 15 0 chr10 27390762 27391241 -118198047 + LTR19A LTR ERV1 1 486 0 2149 121 0 7 chr10 27392816 27393122 -118196166 - AluSx SINE Alu -8 304 1 236 314 0 0 chr10 27393240 27393326 -118195962 - L1MC4 LINE L1 -1342 6700 6615 * 294 269 0 0 chr10 27393254 27393332 -118195956 + (TA)n Simple_repeat Simple_repeat 1 78 0 207 0 0 0 chr10 27393380 27393403 -118195885 + (TATG)n Simple_repeat Simple_repeat 4 26 0 289 0 0 0 chr10 27393776 27393808 -118195480 + (TTTA)n Simple_repeat Simple_repeat 2 156 0 522 73 29 0 chr10 27393808 27393876 -118195412 - AluSg/x SINE Alu -29 283 214 1035 105 0 0 chr10 27393902 27394035 -118195253 - AluSq/x SINE Alu -180 133 1 606 178 10 0 chr10 27394647 27394748 -118194540 - U4 snRNA snRNA -1 144 43 477 128 0 96 chr10 27394795 27394889 -118194399 - FRAM SINE Alu -19 157 73 348 183 110 0 chr10 27395038 27395120 -118194168 + MIR SINE MIR 117 207 -55 2172 107 7 0 chr10 27395300 27395599 -118193689 + AluY SINE Alu 1 301 -10 3911 138 12 49 chr10 27395603 27396361 -118192927 + L1MB3 LINE L1 5444 6173 -10 352 284 0 0 chr10 27396551 27396639 -118192649 + MIR SINE MIR 60 147 -115 2256 87 0 3 chr10 27396691 27396991 -118192297 + AluY SINE Alu 1 299 -12 1587 158 3 76 chr10 27396988 27397291 -118191997 - AluJo SINE Alu -31 281 1 * 224 287 46 11 chr10 27397296 27397383 -118191905 + MIR SINE MIR 167 256 -6 324 65 0 0 chr10 27399372 27399418 -118189870 + MADE1 DNA Mariner 1 46 -34 552 333 10 10 chr10 27399599 27399803 -118189485 - MIR SINE MIR 0 262 59 2769 159 62 18 chr10 27399882 27400380 -118188908 + MLT2B1 LTR ERVL 1 520 0 397 286 28 136 chr10 27401351 27401520 -118187768 + L2 LINE L2 2998 3111 -202 2248 94 0 20 chr10 27401520 27401817 -118187471 + AluSx SINE Alu 2 292 -20 397 286 28 136 chr10 27401817 27402000 -118187288 + L2 LINE L2 3111 3312 -1 289 317 96 36 chr10 27402247 27402414 -118186874 + MIR3 SINE MIR 4 180 -28 616 163 0 68 chr10 27402622 27402769 -118186519 - FLAM_C SINE Alu 0 143 7 2484 74 0 0 chr10 27402782 27403078 -118186210 - AluSg SINE Alu -14 296 1 1779 154 27 10 chr10 27403104 27403403 -118185885 - AluJb SINE Alu -8 304 1 185 328 45 0 chr10 27404296 27404363 -118184925 - MIR SINE MIR -144 118 49 * 226 213 66 16 chr10 27404361 27404422 -118184866 + L2 LINE L2 3250 3313 0 206 253 181 12 chr10 27404787 27404870 -118184418 + MIR SINE MIR 74 170 -92 656 140 221 15 chr10 27405401 27405537 -118183751 - AluSg/x SINE Alu -12 300 137 602 148 98 25 chr10 27405609 27405731 -118183557 + FLAM_A SINE Alu 11 141 -1 1812 176 83 13 chr10 27405734 27406235 -118183053 + LTR65 LTR ERV1 53 669 0 2287 89 3 13 chr10 27406326 27406628 -118182660 + AluSc SINE Alu 1 299 -10 1801 169 128 58 chr10 27406628 27407112 -118182176 - Charlie1b DNA MER1_type -5 518 1 2443 52 0 19 chr10 27407614 27407921 -118181367 - AluY SINE Alu -10 301 1 23 54 0 0 chr10 27410517 27410554 -118178734 + AT_rich Low_complexity Low_complexity 1 37 0 339 329 7 27 chr10 27411343 27411489 -118177799 + MIR SINE MIR 106 248 -14 629 289 42 71 chr10 27411632 27411940 -118177348 + MER102b DNA MER1_type 37 335 -6 203 238 12 75 chr10 27412068 27412148 -118177140 - MIR SINE MIR -68 194 120 346 289 233 8 chr10 27412844 27413097 -118176191 - L2 LINE L2 -339 2975 2666 492 268 187 29 chr10 27413951 27414857 -118174431 - L1MEd LINE L1 -3044 3496 2440 561 279 97 22 chr10 27415181 27415624 -118173664 - L1MEd LINE L1 -794 2107 1533 471 316 76 26 chr10 27415626 27416090 -118173198 - LTR33A LTR ERVL 0 523 9 306 296 0 23 chr10 27416094 27416182 -118173106 - L1MEd LINE L1 -5007 1523 1438 10180 203 63 40 chr10 27416189 27416587 -118172701 - L1MB3 LINE L1 -10 6984 6597 2035 157 0 0 chr10 27416587 27416893 -118172395 - AluSx SINE Alu -6 306 1 10180 203 63 40 chr10 27416893 27418360 -118170928 - L1MB3 LINE L1 -397 6597 5166 324 0 0 0 chr10 27418360 27418396 -118170892 + (TG)n Simple_repeat Simple_repeat 1 36 0 10180 203 63 40 chr10 27418396 27421301 -118167987 - L1MB3 LINE L1 -1828 5166 1972 2436 81 3 0 chr10 27421301 27421611 -118167677 + AluY SINE Alu 1 311 0 10180 203 63 40 chr10 27421611 27421991 -118167297 - L1MB3 LINE L1 -5022 1972 1602 2473 84 3 0 chr10 27422084 27422395 -118166893 - AluSp SINE Alu 0 313 2 1175 259 39 55 chr10 27422494 27422931 -118166357 - L2 LINE L2 -8 3305 2876 201 387 63 0 chr10 27423410 27423521 -118165767 + MIR SINE MIR 20 137 -71 251 296 16 80 chr10 27424515 27424640 -118164648 - L2 LINE L2 0 3313 3197 568 256 40 0 chr10 27424654 27424779 -118164509 - L2 LINE L2 0 3313 3184 813 320 56 70 chr10 27424946 27425514 -118163774 - L2 LINE L2 -1840 1474 915 189 240 0 20 chr10 27426410 27426460 -118162828 + MIR3 SINE MIR 132 180 -28 187 327 220 13 chr10 27428723 27428882 -118160406 + MIR3 SINE MIR 15 206 -2 1417 171 13 112 chr10 27430581 27430966 -118158322 - MLT1A1 LTR MaLR 0 365 19 1697 131 11 58 chr10 27431039 27431314 -118157974 - AluSx SINE Alu -17 295 34 5547 114 12 6 chr10 27431433 27431845 -118157443 - L1PA13 LINE L1 0 6163 5755 2155 125 54 23 chr10 27431845 27432198 -118157090 + THE1B LTR MaLR 1 364 0 5547 114 12 6 chr10 27432198 27433566 -118155722 - L1PA13 LINE L1 -408 5755 4379 1892 168 6 0 chr10 27433580 27433920 -118155368 - L1PA13 LINE L1 -1702 4444 4103 291 28 0 0 chr10 27434506 27434542 -118154746 + (TG)n Simple_repeat Simple_repeat 2 37 0 487 261 39 64 chr10 27434747 27434950 -118154338 - HAL1 LINE L1 -2299 208 11 2448 124 3 8 chr10 27435108 27435479 -118153809 - Tigger2a DNA MER2_type -25 419 51 668 165 0 9 chr10 27435458 27435573 -118153715 - Tigger2a DNA MER2_type -320 114 1 * 423 252 55 0 chr10 27438834 27438961 -118150327 + L1ME1 LINE L1 6029 6162 -4 23 33 0 0 chr10 27439053 27439083 -118150205 + AT_rich Low_complexity Low_complexity 1 30 0 5554 77 17 16 chr10 27439138 27439966 -118149322 - L1M1 LINE L1 -4251 3314 2486 4058 204 21 23 chr10 27439971 27440663 -118148625 - L1M1 LINE L1 -6681 884 193 189 0 0 0 chr10 27440663 27440684 -118148604 + (TC)n Simple_repeat Simple_repeat 2 22 0 4058 204 21 23 chr10 27440684 27440864 -118148424 - L1M1 LINE L1 -7372 193 14 463 322 95 14 chr10 27440991 27441274 -118148014 - L2 LINE L2 0 3313 3008 1337 287 93 58 chr10 27441507 27442760 -118146528 + L1ME LINE L1 36 1331 -5065 2041 266 82 25 chr10 27442801 27443340 -118145948 + L1ME LINE L1 1390 1897 -4318 3003 171 26 16 chr10 27443340 27443661 -118145627 + MER44D DNA MER2_type 2 387 -2100 2142 84 21 14 chr10 27443661 27443947 -118145341 + AluY SINE Alu 1 288 -23 3003 171 26 16 chr10 27443947 27444169 -118145119 + MER44D DNA MER2_type 387 605 0 2041 266 82 25 chr10 27444169 27445693 -118143595 + L1ME LINE L1 1897 3631 -2584 980 318 22 5 chr10 27446129 27446532 -118142756 - L1M4c LINE L1 -4571 2388 1979 1020 140 0 0 chr10 27446534 27446691 -118142597 - AluSg/x SINE Alu 0 312 156 3451 208 66 31 chr10 27446692 27447692 -118141596 - L1M4c LINE L1 -4983 1976 903 4559 128 6 0 chr10 27447704 27448406 -118140882 - L1P LINE L1 -1512 4634 3929 3650 107 0 0 chr10 27448405 27448947 -118140341 + L1P LINE L1 4752 5293 -853 * 413 58 0 0 chr10 27448947 27448993 -118140295 + L1PA10 LINE L1 6100 6151 -17 1398 229 61 20 chr10 27449026 27449541 -118139747 - L1M4c LINE L1 -5963 896 2 596 246 99 78 chr10 27449578 27449604 -118139684 + L1ME LINE L1 3699 3723 -2492 2632 213 78 30 chr10 27449604 27450293 -118138995 - MER72 LTR ERV1 0 722 1 596 246 99 78 chr10 27450293 27450640 -118138648 + L1ME LINE L1 3723 4080 -2135 1113 272 45 0 chr10 27450695 27451008 -118138280 + L1ME LINE L1 5456 5782 -451 1992 133 65 31 chr10 27452949 27453301 -118135987 - THE1B LTR MaLR 0 364 1 795 219 91 0 chr10 27454442 27454629 -118134659 - MER20 DNA MER1_type -2 217 14 2461 66 0 3 chr10 27454658 27454963 -118134325 + AluY SINE Alu 1 304 -7 235 250 19 0 chr10 27455099 27455151 -118134137 + L2 LINE L2 3251 3303 -10 2363 137 119 7 chr10 27455412 27455876 -118133412 - L1MC2 LINE L1 0 6344 5831 1334 206 85 19 chr10 27455977 27456455 -118132833 + L1ME1 LINE L1 4960 5466 -700 950 157 63 26 chr10 27456466 27456657 -118132631 + L1PB1 LINE L1 3 200 -6663 13075 101 114 16 chr10 27456657 27457959 -118131329 + L1PB1 LINE L1 634 2226 -4637 2448 66 0 7 chr10 27457959 27458260 -118131028 - AluY SINE Alu -12 299 1 13075 101 114 16 chr10 27458260 27459087 -118130201 + L1PB1 LINE L1 2226 2971 -3892 1574 199 82 3 chr10 27459095 27459411 -118129877 + LTR9B LTR ERV1 304 644 0 10875 179 20 13 chr10 27459412 27459659 -118129629 + L1PB1 LINE L1 3510 3754 -3113 2002 152 0 0 chr10 27459659 27459962 -118129326 + AluSx SINE Alu 1 303 -9 10875 179 20 13 chr10 27459962 27460092 -118129196 + L1PB1 LINE L1 3754 3882 -2985 207 0 0 0 chr10 27460092 27460115 -118129173 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 10875 179 20 13 chr10 27460115 27463076 -118126212 + L1PB1 LINE L1 3882 6867 0 26 0 0 0 chr10 27463076 27463102 -118126186 + AT_rich Low_complexity Low_complexity 1 26 0 1260 236 60 23 chr10 27463102 27463512 -118125776 + L1ME1 LINE L1 5457 5892 -278 1612 141 56 30 chr10 27463644 27463948 -118125340 - AluJo SINE Alu 0 312 1 517 230 72 0 chr10 27464242 27464381 -118124907 + MIR SINE MIR 114 262 0 39052 51 3 1 chr10 27465221 27470921 -118118367 - L1PA5 LINE L1 -7 6147 435 880 293 69 18 chr10 27472232 27472624 -118116664 + MLT1L LTR MaLR 142 553 -62 2307 74 0 3 chr10 27473593 27473901 -118115387 - AluY SINE Alu 0 307 1 738 314 69 31 chr10 27474394 27474814 -118114474 + L2 LINE L2 2311 2746 -568 365 118 0 0 chr10 27475381 27475432 -118113856 - Alu SINE Alu -8 293 243 1860 135 168 11 chr10 27475482 27475852 -118113436 - MSTA LTR MaLR 0 428 1 1743 173 0 18 chr10 27476406 27476689 -118112599 + AluJo SINE Alu 4 281 -31 1804 174 142 74 chr10 27476956 27477526 -118111762 - LTR10A LTR ERV1 0 609 1 184 356 41 0 chr10 27477654 27477727 -118111561 + L2 LINE L2 3179 3254 -18 222 337 54 36 chr10 27477747 27477913 -118111375 + MIR SINE MIR 68 236 -26 286 250 16 0 chr10 27477959 27478023 -118111265 + L2 LINE L2 3248 3312 -1 4734 207 78 23 chr10 27479013 27480339 -118108949 + L1MC4 LINE L1 6473 7904 -138 201 147 0 0 chr10 27480379 27480413 -118108875 + (TATATG)n Simple_repeat Simple_repeat 3 36 0 20614 30 8 7 chr10 27480832 27484096 -118105192 + L1PA3 LINE L1 2886 6152 -3 195 230 69 69 chr10 27484450 27484537 -118104751 + MIR3 SINE MIR 108 194 -14 196 318 152 0 chr10 27484993 27485059 -118104229 - L3 LINE CR1 -3 1574 1499 2331 101 10 0 chr10 27485157 27485464 -118103824 - AluSg SINE Alu 0 310 1 292 270 0 45 chr10 27485498 27485587 -118103701 - MIR3 SINE MIR -40 168 84 544 158 0 21 chr10 27485720 27485815 -118103473 - AluSg/x SINE Alu -19 290 198 1698 177 0 32 chr10 27485849 27486160 -118103128 + AluJb SINE Alu 1 301 -11 9084 175 21 17 chr10 27486202 27488987 -118100301 + L1PB3 LINE L1 3369 6154 0 277 194 0 28 chr10 27489185 27489257 -118100031 - MLT2D LTR ERVL -295 119 50 271 98 0 0 chr10 27489340 27489381 -118099907 - MLT2D LTR ERVL -373 41 1 264 326 31 0 chr10 27490225 27490323 -118098965 + MIR3 SINE MIR 87 187 -21 25 65 0 0 chr10 27492274 27492320 -118096968 + AT_rich Low_complexity Low_complexity 1 46 0 42 36 0 0 chr10 27492678 27492734 -118096554 + AT_rich Low_complexity Low_complexity 1 56 0 579 242 0 0 chr10 27493365 27493493 -118095795 + MER94 DNA DNA 4 131 -3 883 229 46 29 chr10 27493674 27493914 -118095374 - L1MB8 LINE L1 -1 6177 5934 482 0 0 17 chr10 27493914 27493973 -118095315 + (TTTA)n Simple_repeat Simple_repeat 2 59 0 1513 61 0 0 chr10 27493973 27494154 -118095134 - AluY SINE Alu -24 287 107 1293 104 0 0 chr10 27494155 27494318 -118094970 - AluY SINE Alu -148 163 1 1268 183 21 7 chr10 27494318 27494586 -118094702 - L1MB8 LINE L1 -241 5913 5662 209 238 0 0 chr10 27494747 27494789 -118094499 + (TA)n Simple_repeat Simple_repeat 1 42 0 34 24 0 0 chr10 27496750 27496791 -118092497 + AT_rich Low_complexity Low_complexity 1 41 0 1622 215 24 1 chr10 27499025 27499431 -118089857 - L1PA15-16 LINE L1 -3845 3004 2591 360 319 29 91 chr10 27499491 27499732 -118089556 + L2 LINE L2 3031 3256 -16 784 331 128 20 chr10 27500089 27500494 -118088794 - L3 LINE CR1 -12 1565 1117 2159 87 4 0 chr10 27501409 27501686 -118087602 - AluY SINE Alu -17 294 17 1897 172 0 0 chr10 27502050 27502347 -118086941 - AluJb SINE Alu -15 297 1 387 270 116 21 chr10 27502363 27502596 -118086692 - L1ME4a LINE L1 -188 5933 5679 23 33 0 0 chr10 27502643 27502673 -118086615 + AT_rich Low_complexity Low_complexity 1 30 0 619 305 62 13 chr10 27502796 27503022 -118086266 - MIR SINE MIR -12 250 14 1921 237 69 14 chr10 27503328 27503818 -118085470 - LTR40a LTR ERVL 0 519 3 483 298 50 32 chr10 27503953 27504232 -118085056 - L1MEd LINE L1 -4862 1257 974 22 80 0 0 chr10 27505018 27505068 -118084220 + AT_rich Low_complexity Low_complexity 1 50 0 21 0 0 0 chr10 27505434 27505455 -118083833 + AT_rich Low_complexity Low_complexity 1 21 0 598 202 18 0 chr10 27506361 27506495 -118082793 - FLAM_A SINE Alu 0 140 5 2389 78 0 3 chr10 27507037 27507343 -118081945 + AluSg SINE Alu 1 305 -5 339 355 69 16 chr10 27507683 27507765 -118081523 + L2 LINE L2 2304 2380 -934 2060 107 0 24 chr10 27507765 27508081 -118081207 - AluSg SINE Alu 0 309 1 339 355 69 16 chr10 27508081 27508186 -118081102 + L2 LINE L2 2380 2502 -812 32 26 0 0 chr10 27509524 27509563 -118079725 + AT_rich Low_complexity Low_complexity 1 39 0 305 267 119 0 chr10 27510269 27510370 -118078918 - MIR3 SINE MIR -1 207 95 2278 77 0 20 chr10 27510643 27510941 -118078347 - AluY SINE Alu -19 292 1 407 302 9 93 chr10 27511673 27511888 -118077400 + MIR SINE MIR 32 228 -34 256 296 0 0 chr10 27511944 27511998 -118077290 + L2 LINE L2 3241 3294 -19 8987 171 80 14 chr10 27512207 27512326 -118076962 - L1 LINE L1 -1161 6404 6294 1366 131 123 78 chr10 27512326 27512685 -118076603 - THE1C LTR MaLR 0 375 1 8987 171 80 14 chr10 27512685 27513724 -118075564 - L1 LINE L1 -1271 6294 5325 2031 68 0 68 chr10 27513724 27514039 -118075249 - AluSp SINE Alu 0 319 24 8987 171 80 14 chr10 27514039 27514881 -118074407 - L1 LINE L1 -2240 5325 4269 3362 122 0 4 chr10 27514887 27515377 -118073911 - MER75 DNA T2_type -24 490 3 19368 157 40 6 chr10 27515379 27516037 -118073251 - L1 LINE L1 -3280 4285 3651 216 67 0 0 chr10 27516037 27516067 -118073221 + (TTG)n Simple_repeat Simple_repeat 2 31 0 19368 157 40 6 chr10 27516067 27517852 -118071436 - L1 LINE L1 -3914 3651 1657 333 0 0 0 chr10 27517852 27517889 -118071399 + (TC)n Simple_repeat Simple_repeat 2 38 0 19368 157 40 6 chr10 27517889 27519260 -118070028 - L1 LINE L1 -5908 1657 334 450 0 0 0 chr10 27520069 27520119 -118069169 + (TAGA)n Simple_repeat Simple_repeat 1 50 0 255 114 0 0 chr10 27520156 27520191 -118069097 + MER21A LTR ERV1 34 68 -863 2486 170 133 113 chr10 27520301 27521119 -118068169 + MER21A LTR ERV1 70 904 -27 202 200 50 0 chr10 27521146 27521186 -118068102 + MER91B DNA MER1_type 36 77 -113 2496 58 0 13 chr10 27522194 27522504 -118066784 + AluY SINE Alu 1 306 -5 206 269 19 0 chr10 27523236 27523288 -118066000 + (TATATG)n Simple_repeat Simple_repeat 2 54 0 1345 278 75 8 chr10 27523381 27523871 -118065417 - L2 LINE L2 -933 2381 1859 275 292 77 15 chr10 27523872 27524002 -118065286 + L1MC4a LINE L1 7315 7452 -356 709 293 171 10 chr10 27524024 27524369 -118064919 - L2 LINE L2 -1469 1845 1422 2306 104 13 0 chr10 27524369 27524676 -118064612 - AluY SINE Alu 0 311 1 709 293 171 10 chr10 27524676 27524740 -118064548 - L2 LINE L2 -1892 1422 1370 266 193 0 0 chr10 27524777 27524834 -118064454 + L1ME4a LINE L1 6063 6119 -2 384 98 0 7 chr10 27524920 27524984 -118064304 - Alu SINE Alu -251 49 1 186 97 75 21 chr10 27526239 27526332 -118062956 + (TA)n Simple_repeat Simple_repeat 2 99 0 967 265 15 0 chr10 27526425 27526629 -118062659 + MER58A DNA MER1_type 5 211 -13 229 246 16 0 chr10 27527881 27527942 -118061346 + (TA)n Simple_repeat Simple_repeat 2 63 0 527 281 145 42 chr10 27528043 27528246 -118061042 - L2 LINE L2 -4 3309 3128 2137 129 0 3 chr10 27528246 27528555 -118060733 + AluSg SINE Alu 1 308 -2 527 281 145 42 chr10 27528555 27528971 -118060317 - L2 LINE L2 -185 3128 2625 278 263 20 81 chr10 27529170 27529201 -118060087 + LTR33 LTR ERVL 5 36 -485 1867 195 87 19 chr10 27529201 27529672 -118059616 + MLT1D LTR MaLR 3 505 0 278 263 20 81 chr10 27529672 27529739 -118059549 + LTR33 LTR ERVL 36 97 -424 586 266 86 27 chr10 27529748 27529970 -118059318 + LTR33 LTR ERVL 221 455 -66 2339 195 66 2 chr10 27529973 27530430 -118058858 + L1MCa LINE L1 28 513 -5913 3490 181 49 32 chr10 27530431 27531230 -118058058 + L1MCa LINE L1 613 1424 -5002 4308 171 26 4 chr10 27532519 27533321 -118055967 - L1MC1 LINE L1 -5 6328 5509 3310 232 33 2 chr10 27533323 27534197 -118055091 - L1MC1 LINE L1 -1405 4741 3841 224 306 67 15 chr10 27534404 27534538 -118054750 + L2 LINE L2 3165 3305 -8 1871 100 0 16 chr10 27534576 27534678 -118054610 + AluSx SINE Alu 35 137 -168 2189 106 0 13 chr10 27534678 27535021 -118054267 + AluSp SINE Alu 1 313 0 1871 100 0 16 chr10 27535021 27535193 -118054095 + AluSx SINE Alu 137 305 0 2532 70 0 3 chr10 27535619 27535931 -118053357 - AluY SINE Alu 0 311 1 249 376 36 21 chr10 27536082 27536405 -118052883 - L2 LINE L2 -211 3061 2702 224 325 48 16 chr10 27536764 27536890 -118052398 - L2 LINE L2 0 3313 3184 2154 95 7 0 chr10 27536962 27537236 -118052052 + AluSc SINE Alu 22 297 -12 356 131 33 0 chr10 27537309 27537370 -118051918 - L1M4 LINE L1 -898 5248 5186 228 190 52 35 chr10 27537891 27537949 -118051339 - LTR33 LTR ERVL -6 515 457 1089 236 7 7 chr10 27537983 27538271 -118051017 - L1M4 LINE L1 -974 5172 4885 3105 274 133 37 chr10 27538618 27540005 -118049283 - L2 LINE L2 -2 3311 2058 2227 107 3 7 chr10 27540005 27540315 -118048973 + AluSx SINE Alu 2 310 -2 3105 274 133 37 chr10 27540315 27540537 -118048751 - L2 LINE L2 -1255 2058 1859 2601 26 3 19 chr10 27540537 27540846 -118048442 + AluY SINE Alu 1 304 -7 3105 274 133 37 chr10 27540846 27540888 -118048400 - L2 LINE L2 -1454 1859 1507 384 117 0 78 chr10 27544359 27544417 -118044871 + L1ME1 LINE L1 5775 5827 -337 1469 158 21 4 chr10 27544417 27544651 -118044637 + AluJo SINE Alu 65 302 -10 384 117 0 78 chr10 27544651 27544669 -118044619 + L1ME1 LINE L1 5827 5845 -319 1886 90 7 80 chr10 27544697 27544998 -118044290 + AluY SINE Alu 1 279 -32 291 98 0 0 chr10 27544998 27545065 -118044223 + Alu SINE Alu 241 307 0 23 0 0 0 chr10 27545065 27545088 -118044200 + AT_rich Low_complexity Low_complexity 1 23 0 1279 209 36 10 chr10 27545088 27545394 -118043894 + L1ME1 LINE L1 5845 6158 -8 417 325 36 16 chr10 27545713 27545965 -118043323 - L1M4 LINE L1 -1146 5000 4744 244 87 101 0 chr10 27545983 27546052 -118043236 + (TA)n Simple_repeat Simple_repeat 1 76 0 2573 224 15 5 chr10 27546059 27546671 -118042617 - L1 LINE L1 -904 6263 5646 1771 136 3 10 chr10 27546685 27546979 -118042309 - L1PB1 LINE L1 0 6867 6576 425 109 0 70 chr10 27546981 27547248 -118042040 + (TA)n Simple_repeat Simple_repeat 1 248 0 13840 197 60 17 chr10 27547268 27553496 -118035792 - L1PB1 LINE L1 -360 6507 6 1829 154 51 2 chr10 27553521 27553931 -118035357 - L1 LINE L1 -1510 5657 5228 1082 135 81 9 chr10 27553933 27554155 -118035133 - Tigger7 DNA MER2_type 0 2491 2254 246 62 0 0 chr10 27554155 27554187 -118035101 + (TC)n Simple_repeat Simple_repeat 1 32 0 3454 162 71 3 chr10 27554189 27554836 -118034452 - Tigger7 DNA MER2_type -1755 732 42 1316 209 0 3 chr10 27554846 27555138 -118034150 - L1 LINE L1 -1941 5226 4936 3974 209 23 14 chr10 27555555 27555896 -118033392 - L1 LINE L1 -2201 4966 4630 1818 180 0 16 chr10 27555896 27556213 -118033075 - AluJo SINE Alu 0 312 1 3974 209 23 14 chr10 27556213 27556983 -118032305 - L1 LINE L1 -2537 4630 3845 1326 213 27 45 chr10 27557103 27557460 -118031828 - L1 LINE L1 -6769 399 48 1777 156 46 22 chr10 27557460 27557826 -118031462 - THE1C LTR MaLR 0 375 1 1326 213 27 45 chr10 27557826 27557872 -118031416 - L1 LINE L1 -7120 48 3 26 50 0 0 chr10 27559561 27559601 -118029687 + AT_rich Low_complexity Low_complexity 1 40 0 185 222 0 0 chr10 27559888 27559933 -118029355 - L2 LINE L2 -6 3307 3263 2228 82 10 0 chr10 27560726 27561017 -118028271 + AluY SINE Alu 1 294 -17 464 330 108 0 chr10 27561115 27561300 -118027988 + MIR SINE MIR 56 260 -2 220 205 0 0 chr10 27561340 27561379 -118027909 + L2 LINE L2 3216 3254 -18 652 279 25 5 chr10 27562375 27562576 -118026712 - LTR33 LTR ERVL -296 225 21 180 366 40 30 chr10 27562916 27563017 -118026271 - L2 LINE L2 -9 3263 3162 541 286 81 24 chr10 27563029 27563239 -118026049 - MIR SINE MIR -13 249 28 292 200 0 0 chr10 27563262 27563312 -118025976 - L2 LINE L2 0 3313 3264 223 198 55 66 chr10 27563387 27563478 -118025810 - L2 LINE L2 -1891 1423 1334 2457 65 3 0 chr10 27563588 27563881 -118025407 + AluY SINE Alu 1 294 -17 191 86 35 52 chr10 27565073 27565131 -118024157 + G-rich Low_complexity Low_complexity 4 60 0 27 29 0 0 chr10 27565288 27565322 -118023966 + AT_rich Low_complexity Low_complexity 1 34 0 233 274 177 52 chr10 27565817 27566218 -118023070 + L2 LINE L2 1980 2430 -884 2534 62 0 0 chr10 27566722 27567028 -118022260 - AluY SINE Alu -4 307 2 200 247 286 0 chr10 27568049 27568126 -118021162 - MIR3 SINE MIR 0 208 110 402 333 118 0 chr10 27568126 27568330 -118020958 + MIR SINE MIR 1 228 -34 * 579 218 109 12 chr10 27568309 27568474 -118020814 + L2 LINE L2 3127 3307 -6 223 308 192 0 chr10 27569050 27569170 -118020118 - MIR SINE MIR -10 252 110 228 281 12 0 chr10 27569207 27569289 -118019999 + (CATATA)n Simple_repeat Simple_repeat 5 87 0 1315 169 72 63 chr10 27569312 27569674 -118019614 - L1MB8 LINE L1 -1 6177 5813 38004 72 10 7 chr10 27569696 27575819 -118013469 - L1PA5 LINE L1 -3 6151 11 2865 191 27 17 chr10 27575821 27577019 -118012269 - L1MB8 LINE L1 -345 5833 4622 270 0 0 0 chr10 27577174 27577204 -118012084 + (CA)n Simple_repeat Simple_repeat 2 31 0 865 316 55 25 chr10 27577268 27577905 -118011383 - L1MC4a LINE L1 -1898 5910 5255 23 68 0 0 chr10 27578124 27578168 -118011120 + AT_rich Low_complexity Low_complexity 1 44 0 336 300 50 27 chr10 27578256 27578556 -118010732 - L1MC4a LINE L1 -1314 4832 4526 22 0 0 0 chr10 27578661 27578683 -118010605 + AT_rich Low_complexity Low_complexity 1 22 0 465 282 95 25 chr10 27578728 27579253 -118010035 - L1MC4a LINE L1 -1904 4242 3681 202 253 67 27 chr10 27579381 27579456 -118009832 + MER5A DNA MER1_type 87 164 -25 2260 103 0 3 chr10 27579508 27579809 -118009479 + AluY SINE Alu 1 300 -11 397 278 99 81 chr10 27579897 27580343 -118008945 - L1MC4a LINE L1 -2703 3443 2990 1141 221 72 0 chr10 27581586 27581835 -118007453 + Tigger7 DNA MER2_type 1 267 -466 515 168 0 40 chr10 27581834 27581935 -118007353 + Tigger7 DNA MER2_type 2490 2586 -1 * 1604 193 23 20 chr10 27583164 27583470 -118005818 - AluJo SINE Alu -3 309 3 227 175 0 0 chr10 27584903 27584943 -118004345 + CT-rich Low_complexity Low_complexity 1 40 0 2112 123 10 3 chr10 27585493 27585802 -118003486 + AluSx SINE Alu 1 311 -1 341 320 64 6 chr10 27586019 27586175 -118003113 + MIR3 SINE MIR 35 199 -9 403 348 85 0 chr10 27587020 27587138 -118002150 - L2 LINE L2 -9 3263 3136 360 403 28 17 chr10 27587290 27587578 -118001710 - L2 LINE L2 -400 2914 2624 2220 183 24 21 chr10 27588408 27588873 -118000415 - MLT1C LTR MaLR -1 466 1 1050 163 36 50 chr10 27589024 27589245 -118000043 - MER20 DNA MER1_type 0 219 2 6048 66 5 23 chr10 27589631 27590500 -117998788 - L1PA13 LINE L1 -11 6152 5300 689 275 122 59 chr10 27590660 27590935 -117998353 + L2 LINE L2 2489 2745 -568 2239 100 0 7 chr10 27590935 27591235 -117998053 - AluSx SINE Alu -14 298 1 689 275 122 59 chr10 27591235 27591732 -117997556 + L2 LINE L2 2745 3294 -19 1553 173 20 39 chr10 27592177 27592483 -117996805 + AluJo SINE Alu 1 300 -12 199 278 11 100 chr10 27592739 27592829 -117996459 - L2 LINE L2 -7 3306 3225 2168 92 0 4 chr10 27593785 27594058 -117995230 + AluSx SINE Alu 15 286 -26 344 372 28 0 chr10 27594789 27594934 -117994354 + L2 LINE L2 2531 2679 -635 225 154 0 0 chr10 27595003 27595042 -117994246 + CT-rich Low_complexity Low_complexity 3 41 0 241 268 141 0 chr10 27595130 27595201 -117994087 + L2 LINE L2 3191 3271 -1 439 330 125 47 chr10 27595208 27595763 -117993525 + L1M4 LINE L1 4778 5403 -743 2338 93 0 0 chr10 27595948 27596259 -117993029 + AluY SINE Alu 1 311 0 1489 158 0 20 chr10 27596268 27596514 -117992774 + AluJo SINE Alu 64 304 -8 346 300 0 0 chr10 27599292 27599382 -117989906 + MIR3 SINE MIR 65 154 -54 208 291 0 0 chr10 27599567 27599622 -117989666 + MIR3 SINE MIR 151 205 -3 42 71 0 0 chr10 27600060 27600144 -117989144 + AT_rich Low_complexity Low_complexity 1 84 0 1794 157 0 20 chr10 27602415 27602715 -117986573 - AluJb SINE Alu -18 294 1 949 213 0 0 chr10 27605901 27606070 -117983218 - FRAM SINE Alu -15 161 1 593 188 13 34 chr10 27606822 27606971 -117982317 + L1MC4 LINE L1 7897 8042 0 224 293 85 37 chr10 27607408 27607490 -117981798 - MIR SINE MIR -104 104 19 32 43 0 0 chr10 27607649 27607695 -117981593 + AT_rich Low_complexity Low_complexity 1 46 0 2117 104 33 3 chr10 27607999 27608298 -117980990 + AluSq SINE Alu 3 310 -3 2004 132 7 7 chr10 27609040 27609344 -117979944 + AluSx SINE Alu 1 304 -8 21 0 0 0 chr10 27609399 27609420 -117979868 + AT_rich Low_complexity Low_complexity 1 21 0 3515 120 92 21 chr10 27609589 27610645 -117978643 + MER11A LTR ERVK 1 1236 0 23 39 0 39 chr10 27611528 27611552 -117977736 + AT_rich Low_complexity Low_complexity 1 24 -26 1882 102 8 16 chr10 27611552 27611807 -117977481 - AluSp SINE Alu -24 289 37 23 39 0 39 chr10 27611807 27611834 -117977454 + AT_rich Low_complexity Low_complexity 24 50 0 1591 137 67 39 chr10 27611914 27612198 -117977090 + AluSx SINE Alu 1 292 -20 194 172 276 0 chr10 27612369 27612427 -117976861 - L2 LINE L2 -251 3062 2989 2395 97 0 3 chr10 27612706 27613016 -117976272 + AluSx SINE Alu 1 309 -3 1080 115 0 33 chr10 27613250 27613432 -117975856 + AluY SINE Alu 129 304 -7 282 286 16 0 chr10 27616904 27616967 -117972321 + MIR SINE MIR 40 103 -105 329 217 69 79 chr10 27617986 27618189 -117971099 + L1M4 LINE L1 4290 4490 -1656 212 0 36 0 chr10 27618514 27618542 -117970746 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 2119 105 0 0 chr10 27618544 27618821 -117970467 - AluY SINE Alu -29 282 6 342 264 76 36 chr10 27620170 27620334 -117968954 - MIR SINE MIR -61 147 4 2334 87 0 0 chr10 27620648 27620937 -117968351 + AluSx SINE Alu 1 289 -23 201 245 20 0 chr10 27621447 27621496 -117967792 - L3b LINE CR1 -5 1578 1529 992 161 21 32 chr10 27622347 27622493 -117966795 + MER5A DNA MER1_type 1 146 -43 2355 88 0 10 chr10 27622493 27622798 -117966490 + AluSq SINE Alu 1 302 -11 992 161 21 32 chr10 27622798 27622837 -117966451 + MER5A DNA MER1_type 146 184 -5 1330 177 56 76 chr10 27623967 27624363 -117964925 - MLT1B LTR MaLR -2 388 1 860 133 0 0 chr10 27624430 27624550 -117964738 + FLAM_C SINE Alu 1 120 -13 245 250 0 0 chr10 27624947 27625011 -117964277 + (ATG)n Simple_repeat Simple_repeat 2 65 0 567 229 14 7 chr10 27625646 27625657 -117963631 - L1MA10 LINE L1 -2 6332 6322 421 282 41 18 chr10 27625657 27625827 -117963461 - L1ME1 LINE L1 -4 6162 5989 3118 203 43 75 chr10 27625835 27626825 -117962463 - L1MDa LINE L1 -1222 5318 4362 2258 123 0 0 chr10 27626825 27627134 -117962154 - AluSx SINE Alu -3 309 1 3118 203 43 75 chr10 27627134 27627200 -117962088 - L1MDa LINE L1 -2178 4362 4295 1901 137 232 29 chr10 27627224 27627629 -117961659 - L1MA8 LINE L1 -2 6289 5767 252 0 0 0 chr10 27627629 27627657 -117961631 + (TG)n Simple_repeat Simple_repeat 2 29 0 1901 137 232 29 chr10 27627657 27627739 -117961549 - L1MA8 LINE L1 -524 5767 5703 4158 235 124 12 chr10 27627739 27629334 -117959954 - L1MDa LINE L1 -2273 4267 2475 877 225 38 21 chr10 27629345 27629585 -117959703 - L1MDa LINE L1 -6117 604 361 436 257 164 33 chr10 27629847 27630030 -117959258 - MIR SINE MIR 0 262 56 414 286 106 25 chr10 27630738 27630937 -117958351 - MIR SINE MIR -28 234 20 2147 123 7 3 chr10 27631769 27632079 -117957209 - AluSx SINE Alu -1 311 1 1240 115 5 0 chr10 27634289 27634480 -117954808 - L1PA13 LINE L1 -3 6160 5969 246 290 111 44 chr10 27635320 27635420 -117953868 + MIR SINE MIR 3 95 -167 1275 122 0 80 chr10 27635420 27635658 -117953630 + MER20 DNA MER1_type 1 219 0 246 290 111 44 chr10 27635658 27635742 -117953546 + MIR SINE MIR 95 195 -67 2353 87 0 10 chr10 27635844 27636154 -117953134 - AluY SINE Alu -4 307 1 22 0 0 0 chr10 27636259 27636281 -117953007 + AT_rich Low_complexity Low_complexity 1 22 0 2128 79 61 0 chr10 27636609 27636889 -117952399 - AluY SINE Alu -14 297 1 2407 61 0 61 chr10 27636948 27637278 -117952010 - AluY SINE Alu -1 310 1 1498 171 19 26 chr10 27638005 27638274 -117951014 + AluJo SINE Alu 46 312 0 607 265 14 62 chr10 27639104 27639315 -117949973 + MIR SINE MIR 3 203 -59 25 0 0 0 chr10 27639357 27639382 -117949906 + AT_rich Low_complexity Low_complexity 1 25 0 182 263 0 35 chr10 27639498 27639555 -117949733 - L2 LINE L2 -2 3270 3216 296 232 37 49 chr10 27639719 27639801 -117949487 + L2 LINE L2 3232 3312 -1 208 342 171 34 chr10 27640908 27642477 -117946811 - L2 LINE L2 -557 2757 975 199 327 139 0 chr10 27642714 27642815 -117946473 - MIR3 SINE MIR -36 172 58 756 218 42 0 chr10 27643981 27644146 -117945142 + AluJo SINE Alu 120 291 -21 242 211 211 0 chr10 27645784 27645860 -117943428 + L2 LINE L2 3160 3251 -21 532 278 14 0 chr10 27647088 27647232 -117942056 + MER112 DNA MER1_type 111 256 -4 747 216 125 26 chr10 27647385 27647649 -117941639 + MER46C DNA MER2_type 10 299 -39 191 337 12 12 chr10 27652933 27653019 -117936269 + MIR3 SINE MIR 87 172 -36 2583 44 0 0 chr10 27653613 27653909 -117935379 + AluY SINE Alu 1 296 -15 1822 116 0 4 chr10 27655931 27656182 -117933106 + AluSx SINE Alu 62 311 -1 2012 86 52 0 chr10 27656391 27656687 -117932601 - AluY SINE Alu 0 310 1 2300 109 0 13 chr10 27656690 27657003 -117932285 - AluSq SINE Alu -4 309 1 1111 131 171 0 chr10 27657003 27657202 -117932086 + MER6 DNA MER2_type 633 865 0 2254 94 0 3 chr10 27657447 27657735 -117931553 - AluSx SINE Alu -25 287 1 272 290 66 66 chr10 27657790 27658197 -117931091 + L1ME LINE L1 3814 4220 -1926 381 305 106 39 chr10 27658949 27659483 -117929805 + L1ME LINE L1 5122 5691 -430 306 205 48 0 chr10 27659501 27659584 -117929704 + L1ME LINE L1 5751 5837 -284 22 0 0 0 chr10 27660249 27660271 -117929017 + AT_rich Low_complexity Low_complexity 1 22 0 2602 55 3 0 chr10 27660843 27661151 -117928137 + AluY SINE Alu 1 309 -2 683 189 24 0 chr10 27661543 27661670 -117927618 + FLAM_A SINE Alu 4 133 0 2360 116 0 0 chr10 27662930 27663240 -117926048 - AluSx SINE Alu -2 310 1 633 294 101 32 chr10 27663469 27663864 -117925424 - L1MC4a LINE L1 -298 5823 5459 2480 80 0 0 chr10 27663864 27664166 -117925122 - AluY SINE Alu -9 302 1 633 294 101 32 chr10 27664166 27664384 -117924904 - L1MC4a LINE L1 -662 5459 5257 1238 140 72 0 chr10 27664895 27665088 -117924200 - MLT1B LTR MaLR 0 390 184 7822 30 7 1 chr10 27665091 27666668 -117922620 - L1PA4 LINE L1 0 6155 4574 1067 24 0 0 chr10 27666668 27666791 -117922497 + L1PA4 LINE L1 4464 4586 -1560 1316 116 26 0 chr10 27666791 27666981 -117922307 - MLT1B LTR MaLR -195 195 1 2189 123 10 0 chr10 27667384 27667693 -117921595 + AluSx SINE Alu 1 312 0 194 352 64 59 chr10 27667725 27667961 -117921327 - L2 LINE L2 -668 2646 2410 238 330 66 19 chr10 27668180 27668286 -117921002 - L2 LINE L2 -24 3289 3179 319 115 0 0 chr10 27668383 27668435 -117920853 + MADE1 DNA Mariner 29 80 0 22 35 0 0 chr10 27669403 27669432 -117919856 + AT_rich Low_complexity Low_complexity 1 29 0 192 77 0 0 chr10 27670221 27670247 -117919041 + (TCCC)n Simple_repeat Simple_repeat 1 26 0 2270 117 3 7 chr10 27670247 27670555 -117918733 - AluSq SINE Alu -6 307 1 230 347 129 35 chr10 27671541 27672077 -117917211 + L2 LINE L2 2384 2969 -345 262 254 28 0 chr10 27672459 27672530 -117916758 + (CATA)n Simple_repeat Simple_repeat 3 75 0 313 185 204 9 chr10 27672544 27672652 -117916636 - L1MB8 LINE L1 -7 6171 6043 201 260 0 0 chr10 27672931 27672981 -117916307 + CT-rich Low_complexity Low_complexity 2 51 0 21 0 0 0 chr10 27676939 27676960 -117912328 + GC_rich Low_complexity Low_complexity 1 21 0 333 0 0 0 chr10 27677599 27677636 -117911652 + (CA)n Simple_repeat Simple_repeat 1 37 0 22 35 0 0 chr10 27678366 27678395 -117910893 + AT_rich Low_complexity Low_complexity 1 29 0 315 71 0 0 chr10 27682734 27682776 -117906512 + (TG)n Simple_repeat Simple_repeat 2 43 0 2031 117 0 0 chr10 27686039 27686305 -117902983 - AluSx SINE Alu -11 301 36 849 198 75 16 chr10 27686611 27686798 -117902490 + MER20 DNA MER1_type 7 204 -15 1997 129 0 72 chr10 27687571 27687934 -117901354 + MER1B DNA MER1_type 1 337 0 2321 99 0 13 chr10 27687955 27688258 -117901030 + AluSx SINE Alu 1 299 -13 1083 190 57 14 chr10 27689024 27689235 -117900053 + AluJb SINE Alu 83 302 -10 187 98 0 49 chr10 27689288 27689329 -117899959 + (GGGAA)n Simple_repeat Simple_repeat 4 42 0 1596 178 7 22 chr10 27689473 27689772 -117899516 - AluJo SINE Alu 0 305 11 2089 118 3 10 chr10 27689855 27690152 -117899136 + AluSq SINE Alu 3 297 -16 244 200 0 0 chr10 27690393 27690443 -117898845 + (TG)n Simple_repeat Simple_repeat 2 51 0 1726 185 150 70 chr10 27690657 27691117 -117898171 - MLT1D LTR MaLR -4 501 5 2039 100 0 85 chr10 27691517 27691848 -117897440 - AluSx SINE Alu -7 305 3 300 264 81 47 chr10 27692079 27692227 -117897061 - MIR SINE MIR -27 235 83 2434 80 6 10 chr10 27693089 27693402 -117895886 + AluSq SINE Alu 1 312 -1 338 286 10 0 chr10 27693404 27693502 -117895786 - MIR SINE MIR -59 149 51 618 319 5 14 chr10 27693603 27693813 -117895475 + MIR SINE MIR 23 230 -32 2309 101 0 3 chr10 27693925 27694221 -117895067 - AluSx SINE Alu -17 295 1 327 224 40 0 chr10 27694653 27694729 -117894559 - L3 LINE CR1 -3 1574 1496 944 168 7 0 chr10 27695162 27695317 -117893971 - FRAM SINE Alu -13 163 8 2412 105 0 0 chr10 27695335 27695648 -117893640 - AluSq SINE Alu 0 313 1 257 295 41 16 chr10 27696421 27696543 -117892745 + MIR SINE MIR 126 250 -12 2026 114 22 0 chr10 27696773 27697046 -117892242 + AluSx SINE Alu 1 279 -33 417 20 0 0 chr10 27697046 27697096 -117892192 + (CA)n Simple_repeat Simple_repeat 1 50 0 478 149 0 10 chr10 27698224 27698311 -117890977 - L1MB8 LINE L1 -220 5958 5876 256 200 0 0 chr10 27699010 27699055 -117890233 + L2 LINE L2 3267 3311 -2 1038 168 25 0 chr10 27699887 27700084 -117889204 - L1MA4 LINE L1 0 6300 6099 2075 176 124 0 chr10 27700123 27700533 -117888755 - LOR1b LTR ERV1 0 461 1 2064 104 3 7 chr10 27700666 27700954 -117888334 - AluSq SINE Alu -26 287 1 244 306 66 50 chr10 27700975 27701096 -117888192 + L2 LINE L2 3158 3280 -33 1577 173 0 53 chr10 27702359 27702682 -117886606 + AluJb SINE Alu 1 306 -6 29 70 0 0 chr10 27704166 27704223 -117885065 + AT_rich Low_complexity Low_complexity 1 57 0 2388 39 0 32 chr10 27704487 27704795 -117884493 + AluY SINE Alu 1 298 -13 317 311 0 30 chr10 27706362 27706497 -117882791 - MER94 DNA DNA 0 134 4 471 314 78 12 chr10 27706907 27707152 -117882136 + MIR SINE MIR 1 261 -1 480 258 107 31 chr10 27707257 27707416 -117881872 - MIR3 SINE MIR -34 174 4 641 263 161 10 chr10 27707591 27707796 -117881492 - MIR SINE MIR -15 247 12 5395 130 26 70 chr10 27708215 27708693 -117880595 - L1MA8 LINE L1 -3 6288 5791 2444 67 0 10 chr10 27708693 27709007 -117880281 - AluY SINE Alu 0 311 1 5395 130 26 70 chr10 27709007 27709154 -117880134 - L1MA8 LINE L1 -500 5791 5639 2099 112 7 0 chr10 27709154 27709449 -117879839 - AluSx SINE Alu -15 297 1 5395 130 26 70 chr10 27709449 27709510 -117879778 - L1MA8 LINE L1 -652 5639 5577 2133 99 0 0 chr10 27709510 27709837 -117879451 - AluSx SINE Alu 0 327 1 5395 130 26 70 chr10 27709837 27711165 -117878123 - L1MA8 LINE L1 -714 5577 4342 286 307 223 18 chr10 27711501 27711667 -117877621 + MIR SINE MIR 47 246 -16 3197 251 133 54 chr10 27711918 27712901 -117876387 + L2 LINE L2 1036 1940 -1373 1548 160 0 32 chr10 27712901 27713183 -117876105 + AluJb SINE Alu 1 273 -39 3197 251 133 54 chr10 27713183 27714062 -117875226 + L2 LINE L2 1940 3147 -166 210 71 0 0 chr10 27714062 27714090 -117875198 + (CA)n Simple_repeat Simple_repeat 2 29 0 3197 251 133 54 chr10 27714090 27714272 -117875016 + L2 LINE L2 3147 3313 0 206 220 17 85 chr10 27716338 27716397 -117872891 - MIR3 SINE MIR -23 185 131 21 0 0 0 chr10 27720979 27721000 -117868288 + GC_rich Low_complexity Low_complexity 1 21 0 423 0 0 0 chr10 27721639 27721686 -117867602 + (CA)n Simple_repeat Simple_repeat 1 47 0 22 35 0 0 chr10 27722416 27722445 -117866843 + AT_rich Low_complexity Low_complexity 1 29 0 315 71 0 0 chr10 27726784 27726826 -117862462 + (TG)n Simple_repeat Simple_repeat 2 43 0 1919 117 0 0 chr10 27730089 27730355 -117858933 - AluSx SINE Alu -11 301 36 858 198 75 16 chr10 27730661 27730848 -117858440 + MER20 DNA MER1_type 7 204 -15 2019 129 0 72 chr10 27731621 27731984 -117857304 + MER1B DNA MER1_type 1 337 0 2195 99 0 13 chr10 27732005 27732308 -117856980 + AluSx SINE Alu 1 299 -13 1008 190 57 14 chr10 27733074 27733285 -117856003 + AluJb SINE Alu 83 302 -10 187 98 0 49 chr10 27733338 27733379 -117855909 + (GGGAA)n Simple_repeat Simple_repeat 4 42 0 216 0 0 0 chr10 27733523 27733547 -117855741 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1485 178 0 22 chr10 27733553 27733822 -117855466 - AluJo SINE Alu -39 273 11 1964 118 3 10 chr10 27733905 27734202 -117855086 + AluSq SINE Alu 3 297 -16 244 200 0 0 chr10 27734443 27734493 -117854795 + (TG)n Simple_repeat Simple_repeat 2 51 0 1734 185 150 70 chr10 27734707 27735167 -117854121 - MLT1D LTR MaLR -4 501 5 1913 100 0 85 chr10 27735567 27735898 -117853390 - AluSx SINE Alu -7 305 3 364 264 81 47 chr10 27736129 27736277 -117853011 - MIR SINE MIR -27 235 83 2306 80 6 10 chr10 27737139 27737452 -117851836 + AluSq SINE Alu 1 312 -1 378 279 23 45 chr10 27737454 27737586 -117851702 - MIR SINE MIR -59 149 20 707 319 5 14 chr10 27737653 27737863 -117851425 + MIR SINE MIR 23 230 -32 2179 101 0 3 chr10 27737975 27738271 -117851017 - AluSx SINE Alu -17 295 1 356 224 40 0 chr10 27738703 27738779 -117850509 - L3 LINE CR1 -3 1574 1496 886 168 7 0 chr10 27739212 27739367 -117849921 - FRAM SINE Alu -13 163 8 2291 105 0 0 chr10 27739385 27739698 -117849590 - AluSq SINE Alu 0 313 1 213 312 11 11 chr10 27740184 27740277 -117849011 - L2 LINE L2 -39 3274 3182 314 295 41 16 chr10 27740471 27740593 -117848695 + MIR SINE MIR 126 250 -12 1907 114 22 0 chr10 27740823 27741096 -117848192 + AluSx SINE Alu 1 279 -33 417 20 0 0 chr10 27741096 27741146 -117848142 + (CA)n Simple_repeat Simple_repeat 1 50 0 200 238 0 79 chr10 27742671 27742734 -117846554 - L2 LINE L2 -87 3226 3169 641 354 23 4 chr10 27742760 27743020 -117846268 - L2 LINE L2 -223 3090 2826 31 26 0 0 chr10 27743449 27743487 -117845801 + AT_rich Low_complexity Low_complexity 1 38 0 1673 147 0 0 chr10 27743585 27743844 -117845444 + AluSx SINE Alu 39 297 -15 2254 62 0 36 chr10 27743851 27744156 -117845132 + AluY SINE Alu 5 298 -13 305 309 98 0 chr10 27744349 27744472 -117844816 - L3 LINE CR1 -140 1437 1303 2259 52 0 21 chr10 27745067 27745383 -117843905 - AluY SINE Alu 0 310 1 310 293 7 71 chr10 27745437 27745577 -117843711 - L3 LINE CR1 -404 1173 1043 4695 144 20 45 chr10 27747111 27747967 -117841321 + L1MB3 LINE L1 5287 6163 -20 2312 102 0 3 chr10 27747967 27748281 -117841007 + AluSq SINE Alu 1 313 0 1537 39 10 34 chr10 27748284 27748490 -117840798 + L1PA10 LINE L1 5968 6168 0 4695 144 20 45 chr10 27748490 27748540 -117840748 + L1MB3 LINE L1 6165 6174 -9 2166 87 7 20 chr10 27748540 27748839 -117840449 - AluSq SINE Alu -18 295 1 195 321 56 51 chr10 27749894 27750066 -117839222 - L2 LINE L2 -162 3110 2935 4103 77 71 6 chr10 27750066 27750586 -117838702 - MER41A LTR ERV1 0 554 1 195 321 56 51 chr10 27750586 27750609 -117838679 - L2 LINE L2 -337 2935 2914 2431 99 0 0 chr10 27750711 27751023 -117838265 + AluSx SINE Alu 1 312 0 4579 149 65 11 chr10 27751061 27751804 -117837484 - LTR39 LTR ERV1 0 783 1 1908 96 4 0 chr10 27752181 27752432 -117836856 - AluSx SINE Alu -32 280 29 1296 187 79 18 chr10 27753127 27753405 -117835883 - AluJo SINE Alu -17 295 1 2217 88 6 64 chr10 27753966 27754296 -117834992 - AluY SINE Alu 0 311 1 676 278 110 0 chr10 27754440 27754613 -117834675 + MIR SINE MIR 29 220 -42 313 260 58 10 chr10 27754759 27754863 -117834425 - L1ME LINE L1 -492 5629 5521 2301 105 0 26 chr10 27755436 27755749 -117833539 - AluSx SINE Alu -7 305 1 2165 111 3 10 chr10 27755758 27756056 -117833232 - AluSp SINE Alu -17 296 1 24 32 0 0 chr10 27756202 27756233 -117833055 + AT_rich Low_complexity Low_complexity 1 31 0 1766 96 15 165 chr10 27756969 27757141 -117832147 - MER1B DNA MER1_type -2377 335 253 1857 109 4 0 chr10 27757141 27757398 -117831890 - AluSx SINE Alu -17 295 38 1766 96 15 165 chr10 27757398 27757619 -117831669 - MER1B DNA MER1_type -2459 253 1 913 284 210 23 chr10 27757699 27758750 -117830538 - L2 LINE L2 -502 2812 1565 411 83 0 0 chr10 27758759 27758819 -117830469 + (GGAA)n Simple_repeat Simple_repeat 1 60 0 182 291 0 0 chr10 27759075 27759130 -117830158 - L3b LINE CR1 0 1583 1529 3476 189 52 87 chr10 27759142 27760167 -117829121 - L1MC4 LINE L1 -1 8041 7053 2160 119 3 0 chr10 27760194 27760489 -117828799 + AluSx SINE Alu 1 296 -16 292 204 0 91 chr10 27761171 27761259 -117828029 - MIR SINE MIR 0 262 183 193 306 20 0 chr10 27761371 27761420 -117827868 - MIR SINE MIR -165 97 48 4435 164 39 42 chr10 27761459 27761911 -117827377 - L1MB3 LINE L1 -2 6181 5729 2286 115 0 13 chr10 27761911 27762216 -117827072 - AluSx SINE Alu -11 301 1 4435 164 39 42 chr10 27762216 27762980 -117826308 - L1MB3 LINE L1 -454 5729 4976 497 296 96 58 chr10 27763162 27763446 -117825842 - L1ME4a LINE L1 -178 5943 5632 2213 101 7 0 chr10 27763446 27763742 -117825546 + AluSx SINE Alu 1 298 -14 497 296 96 58 chr10 27763742 27763933 -117825355 - L1ME4a LINE L1 -489 5632 5450 962 83 8 30 chr10 27763994 27764127 -117825161 - L1MA1 LINE L1 -1 6301 6172 896 230 9 14 chr10 27764498 27764711 -117824577 - L1MB3 LINE L1 -2500 3646 3435 247 352 55 0 chr10 27764715 27764843 -117824445 - L1ME4a LINE L1 -2061 4085 3951 266 250 0 16 chr10 27764846 27764910 -117824378 + CT-rich Low_complexity Low_complexity 2 64 0 450 291 124 37 chr10 27764911 27765892 -117823396 - L1ME4a LINE L1 -2201 3945 2879 241 323 75 11 chr10 27767050 27767143 -117822145 + MIR SINE MIR 9 107 -155 314 322 120 19 chr10 27767203 27767411 -117821877 - MIR SINE MIR -10 252 24 2281 67 13 10 chr10 27767411 27767709 -117821579 - AluY SINE Alu -12 299 1 191 333 56 0 chr10 27767740 27767812 -117821476 + MIR SINE MIR 108 183 -79 2280 101 0 3 chr10 27768304 27768601 -117820687 - AluSc SINE Alu -13 296 1 248 311 0 0 chr10 27769140 27769214 -117820074 + MER5A DNA MER1_type 7 80 -109 507 250 66 40 chr10 27769216 27769368 -117819920 + L2 LINE L2 3158 3313 0 356 269 83 9 chr10 27769366 27769474 -117819814 + MER5A DNA MER1_type 71 186 -3 * 208 250 0 0 chr10 27769616 27769664 -117819624 - L2 LINE L2 -4 3309 3262 326 190 70 73 chr10 27770023 27770132 -117819156 + MIR3 SINE MIR 74 183 -25 606 254 111 29 chr10 27770793 27771073 -117818215 - MER20B DNA MER1_type 0 783 481 236 180 0 40 chr10 27771114 27771164 -117818124 - MER20B DNA MER1_type -669 114 67 2624 47 0 0 chr10 27771285 27771584 -117817704 + AluY SINE Alu 1 299 -12 229 232 87 14 chr10 27774526 27774595 -117814693 + MER5C DNA MER1_type 2 75 -249 2240 114 0 0 chr10 27774860 27775158 -117814130 - AluSx SINE Alu -14 298 1 183 167 0 0 chr10 27775308 27775338 -117813950 - MIR SINE MIR -59 149 120 2409 99 0 0 chr10 27775680 27775984 -117813304 + AluSq SINE Alu 1 304 -9 21 0 0 0 chr10 27777193 27777214 -117812074 + AT_rich Low_complexity Low_complexity 1 21 0 1480 145 58 58 chr10 27778978 27779288 -117810000 + AluJo SINE Alu 1 310 -2 2234 108 3 19 chr10 27779469 27779785 -117809503 - AluSx SINE Alu -1 311 1 269 352 85 77 chr10 27779975 27780353 -117808935 - L2 LINE L2 -21 3251 2871 21 0 0 0 chr10 27781088 27781109 -117808179 + AT_rich Low_complexity Low_complexity 1 21 0 734 226 198 19 chr10 27781458 27781670 -117807618 - MIR SINE MIR -3 259 10 24 0 0 0 chr10 27782734 27782758 -117806530 + AT_rich Low_complexity Low_complexity 1 24 0 1807 151 169 20 chr10 27783325 27783675 -117805613 - MER4A LTR ERV1 0 664 263 611 103 21 10 chr10 27783675 27783772 -117805516 - MER4A LTR ERV1 -566 98 1 1001 149 0 0 chr10 27783814 27783962 -117805326 + L1PB4 LINE L1 5996 6143 -13 29 0 0 0 chr10 27783962 27783991 -117805297 + AT_rich Low_complexity Low_complexity 1 29 0 866 271 72 11 chr10 27784261 27784538 -117804750 - HAL1 LINE L1 -1796 711 418 189 333 92 46 chr10 27784848 27785043 -117804245 - L3 LINE CR1 -641 936 733 2054 148 0 0 chr10 27785044 27785341 -117803947 - AluSx SINE Alu -15 297 1 695 256 136 55 chr10 27785376 27785869 -117803419 - L1ME4a LINE L1 -1 6120 5588 352 277 192 11 chr10 27785877 27786054 -117803234 - L3 LINE CR1 -872 705 497 1079 320 97 82 chr10 27786114 27787243 -117802045 + L3 LINE CR1 429 1574 -3 305 305 40 20 chr10 27787330 27787481 -117801807 + MER103 DNA DNA 11 164 -2 2345 86 7 7 chr10 27787663 27787967 -117801321 - AluY SINE Alu -7 304 1 3086 118 7 16 chr10 27790452 27790901 -117798387 - MER65A LTR ERV1 0 445 1 890 97 0 0 chr10 27792892 27793005 -117796283 - AluSg/x SINE Alu -13 299 187 21 0 0 0 chr10 27793257 27793278 -117796010 + AT_rich Low_complexity Low_complexity 1 21 0 195 300 118 27 chr10 27793628 27793738 -117795550 - L2 LINE L2 -672 2642 2523 2426 96 0 0 chr10 27796264 27796576 -117792712 - AluSx SINE Alu 0 312 1 298 325 91 20 chr10 27796875 27797072 -117792216 - MIR SINE MIR 0 262 52 452 322 41 6 chr10 27797540 27797711 -117791577 + MER5B DNA MER1_type 2 178 0 366 80 0 0 chr10 27798597 27798647 -117790641 + (CA)n Simple_repeat Simple_repeat 1 50 0 1005 186 35 30 chr10 27798680 27798879 -117790409 - MER3 DNA MER1_type 0 209 10 1856 172 82 18 chr10 27799063 27799406 -117789882 - MLT1A1 LTR MaLR 0 365 1 2109 114 0 39 chr10 27800019 27800325 -117788963 - AluSx SINE Alu -18 294 1 3650 150 105 0 chr10 27800774 27801381 -117787907 - LTR51 LTR ERV1 0 671 1 180 310 37 132 chr10 27802666 27803021 -117786267 - L2 LINE L2 -11 3261 2941 21 82 0 0 chr10 27804534 27804583 -117784705 + AT_rich Low_complexity Low_complexity 1 49 0 545 103 0 11 chr10 27806535 27806622 -117782666 + (GGGA)n Simple_repeat Simple_repeat 4 89 0 407 218 62 38 chr10 27807871 27808040 -117781248 - L1MD3 LINE L1 0 7995 7772 1158 147 0 0 chr10 27808068 27808238 -117781050 - AluSg/x SINE Alu -9 303 134 2245 105 0 7 chr10 27808238 27808544 -117780744 - AluSx SINE Alu -8 304 1 263 195 0 49 chr10 27808570 27808652 -117780636 - L1MC5 LINE L1 -279 7682 7605 555 308 81 9 chr10 27809238 27809362 -117779926 + MIR SINE MIR 17 131 -131 4000 94 59 0 chr10 27809362 27809885 -117779403 + MER41A LTR ERV1 1 554 0 555 308 81 9 chr10 27809885 27809981 -117779307 + MIR SINE MIR 131 253 -9 188 184 20 0 chr10 27810396 27810445 -117778843 + (TA)n Simple_repeat Simple_repeat 1 50 0 3176 102 13 55 chr10 27810898 27811564 -117777724 + LTR8A LTR ERV1 1 727 0 3082 126 53 25 chr10 27812063 27812660 -117776628 - MER4B LTR ERV1 0 779 1 2015 136 13 7 chr10 27814292 27814593 -117774695 + AluJb SINE Alu 1 303 -9 851 236 15 15 chr10 27814738 27814937 -117774351 + MIR SINE MIR 33 231 -31 1455 178 36 77 chr10 27815430 27815709 -117773579 + MLT1A1 LTR MaLR 16 278 -87 1519 199 28 7 chr10 27815709 27815995 -117773293 + AluJo SINE Alu 1 292 -20 1455 178 36 77 chr10 27815995 27816080 -117773208 + MLT1A1 LTR MaLR 278 365 0 510 17 0 0 chr10 27816147 27816206 -117773082 + (CA)n Simple_repeat Simple_repeat 2 60 0 324 0 0 0 chr10 27816868 27816904 -117772384 + (TG)n Simple_repeat Simple_repeat 1 36 0 1726 141 64 7 chr10 27818033 27818316 -117770972 - AluSx SINE Alu -13 299 1 2178 112 0 3 chr10 27818682 27818994 -117770294 + AluSx SINE Alu 1 311 -1 1585 178 24 21 chr10 27819468 27819755 -117769533 - AluJb SINE Alu -22 290 3 2468 76 3 0 chr10 27820701 27821003 -117768285 - AluSp SINE Alu -10 303 1 256 277 146 36 chr10 27821267 27821404 -117767884 - L2 LINE L2 0 3313 3162 1165 149 0 5 chr10 27821419 27821614 -117767674 + L1MA6 LINE L1 6107 6300 0 553 164 17 0 chr10 27821616 27821732 -117767556 + GA-rich Low_complexity Low_complexity 3 120 0 294 262 33 49 chr10 27822276 27822398 -117766890 - L2 LINE L2 -634 2680 2561 248 203 142 35 chr10 27823501 27823698 -117765590 + HAL1 LINE L1 1066 1283 -1224 898 148 49 0 chr10 27823700 27823842 -117765446 + L1PB3 LINE L1 5998 6146 -8 21 57 0 0 chr10 27823842 27823877 -117765411 + AT_rich Low_complexity Low_complexity 1 35 0 588 182 27 9 chr10 27823886 27823996 -117765292 + FLAM_A SINE Alu 11 122 -20 2384 96 0 3 chr10 27824004 27824307 -117764981 + AluSp SINE Alu 1 302 -11 280 300 108 42 chr10 27824407 27824740 -117764548 + L1MEd LINE L1 11 365 -5754 1546 264 90 26 chr10 27824742 27825328 -117763960 - L2 LINE L2 -2595 719 96 3631 95 2 12 chr10 27825613 27825971 -117763317 - L1PB1 LINE L1 -1 6150 5797 450 0 0 0 chr10 27825971 27826021 -117763267 + (TG)n Simple_repeat Simple_repeat 1 50 0 3631 95 2 12 chr10 27826021 27826155 -117763133 - L1PB1 LINE L1 -354 5797 5663 2115 145 3 0 chr10 27826669 27826980 -117762308 + AluSx SINE Alu 1 312 0 180 0 0 0 chr10 27827904 27827924 -117761364 + (TA)n Simple_repeat Simple_repeat 2 21 0 416 315 19 56 chr10 27828013 27828114 -117761174 - L1ME LINE L1 -389 5732 5642 2004 147 0 16 chr10 27828114 27828289 -117760999 - AluJb SINE Alu -3 309 140 1908 113 28 14 chr10 27828289 27828580 -117760708 - AluSq SINE Alu -18 295 1 2004 147 0 16 chr10 27828580 27828718 -117760570 - AluJb SINE Alu -172 140 1 416 315 19 56 chr10 27828718 27828829 -117760459 - L1ME LINE L1 -479 5642 5528 335 174 12 0 chr10 27829540 27829626 -117759662 + (TA)n Simple_repeat Simple_repeat 2 88 0 2636 155 8 0 chr10 27830002 27830402 -117758886 - MER57A LTR ERV1 0 403 1 298 312 85 21 chr10 27830880 27831021 -117758267 - MIR3 SINE MIR -31 177 28 387 263 39 90 chr10 27831858 27832113 -117757175 - L1M4 LINE L1 -3095 3233 2992 6360 92 14 52 chr10 27832139 27833293 -117755995 + L1PA10 LINE L1 5049 6166 -2 221 194 0 32 chr10 27833425 27833487 -117755801 + (TATATG)n Simple_repeat Simple_repeat 5 64 0 453 273 16 16 chr10 27833607 27833728 -117755560 + L2 LINE L2 3190 3310 -3 354 247 72 0 chr10 27833961 27834058 -117755230 + MER91C DNA MER1_type 36 139 -1 294 29 0 0 chr10 27834219 27834254 -117755034 + (TC)n Simple_repeat Simple_repeat 1 35 0 4562 80 102 2 chr10 27835214 27835814 -117753474 + PABL_A LTR ERV1 1 660 0 5132 104 10 18 chr10 27835815 27836546 -117752742 + PABL_A-int LTR ERV1 2 726 -4289 576 52 0 0 chr10 27836547 27836624 -117752664 - Alu SINE Alu -3 306 230 1487 43 0 16 chr10 27836624 27836810 -117752478 + PABL_A-int LTR ERV1 717 899 -4116 * 3826 63 2 4 chr10 27836802 27837306 -117751982 + PABL_A-int LTR ERV1 1151 1653 -3362 907 156 271 0 chr10 27837306 27837505 -117751783 - LTR8 LTR ERV1 -438 253 1 1356 42 47 5 chr10 27837505 27837696 -117751592 + PABL_A-int LTR ERV1 1862 2060 -2955 5257 229 29 12 chr10 27837696 27839014 -117750274 - L1M4 LINE L1 -4066 1262 14 676 127 59 34 chr10 27839590 27839708 -117749580 + FLAM_C SINE Alu 13 133 -10 1741 111 88 50 chr10 27839714 27840011 -117749277 - AluSx SINE Alu -4 308 1 347 252 137 8 chr10 27840372 27840503 -117748785 + L2 LINE L2 3158 3305 -8 2981 181 22 67 chr10 27840790 27841431 -117747857 - LTR9 LTR ERV1 0 612 1 6198 120 3 1 chr10 27841615 27842559 -117746729 + L1PA13 LINE L1 5215 6163 0 1457 158 10 86 chr10 27843088 27843352 -117745936 + MSTA LTR MaLR 148 388 -40 1927 150 7 0 chr10 27843352 27843645 -117745643 - AluSx SINE Alu -17 295 1 1457 158 10 86 chr10 27843645 27843684 -117745604 + MSTA LTR MaLR 388 428 0 710 265 31 6 chr10 27844587 27844922 -117744366 + FRAM SINE Alu 1 203 0 678 153 0 48 chr10 27844892 27845081 -117744207 + GA-rich Low_complexity Low_complexity 1 180 0 841 161 0 17 chr10 27845121 27845301 -117743987 + GA-rich Low_complexity Low_complexity 4 180 0 315 164 0 0 chr10 27846356 27846417 -117742871 + (CA)n Simple_repeat Simple_repeat 2 62 0 1079 116 46 0 chr10 27847304 27847477 -117741811 + L1MA4 LINE L1 6115 6295 -5 23 0 0 0 chr10 27847575 27847598 -117741690 + AT_rich Low_complexity Low_complexity 1 23 0 222 292 0 0 chr10 27847604 27847652 -117741636 - MIR SINE MIR -4 258 211 2256 76 20 17 chr10 27847960 27847983 -117741305 - AluSc SINE Alu -6 303 282 531 0 0 0 chr10 27847983 27848042 -117741246 + (TATG)n Simple_repeat Simple_repeat 2 60 0 2256 76 20 17 chr10 27848042 27848320 -117740968 - AluSc SINE Alu -27 282 1 383 314 39 76 chr10 27848320 27848804 -117740484 - L1M4 LINE L1 -939 5207 4742 439 316 46 0 chr10 27848841 27848993 -117740295 - MIR SINE MIR -102 160 2 882 70 0 31 chr10 27848999 27849128 -117740160 + AluY SINE Alu 187 311 0 21 36 0 0 chr10 27849199 27849227 -117740061 + AT_rich Low_complexity Low_complexity 1 28 0 1835 141 48 0 chr10 27849306 27849596 -117739692 + AluSx SINE Alu 1 304 -8 754 300 50 27 chr10 27849800 27850240 -117739048 - L1M4 LINE L1 -2027 4119 3670 198 278 19 0 chr10 27851475 27851529 -117737759 - L2 LINE L2 -575 2739 2685 3932 94 53 22 chr10 27851530 27852598 -117736690 + MER11A LTR ERVK 1 1266 0 222 361 98 15 chr10 27853127 27853332 -117735956 + L2 LINE L2 2643 2864 -450 2183 103 4 0 chr10 27853561 27853871 -117735417 - AluY SINE Alu 0 311 1 2232 112 0 0 chr10 27853873 27854167 -117735121 - AluSg SINE Alu -16 294 1 225 271 33 90 chr10 27854184 27854306 -117734982 - MLT1K LTR MaLR -286 302 188 684 174 16 16 chr10 27854498 27854619 -117734669 + MER2 DNA MER2_type 1 121 -224 189 0 0 0 chr10 27854619 27854640 -117734648 + (TA)n Simple_repeat Simple_repeat 2 22 0 686 132 70 18 chr10 27854640 27854754 -117734534 - FLAM_C SINE Alu -13 130 11 526 143 0 0 chr10 27854763 27854854 -117734434 + MER2 DNA MER2_type 120 210 -135 2747 113 60 21 chr10 27855528 27855961 -117733327 + LTR7 LTR ERV1 1 450 0 411 21 0 0 chr10 27856644 27856692 -117732596 + (GA)n Simple_repeat Simple_repeat 1 48 0 1383 202 67 5 chr10 27858338 27858764 -117730524 + MLT1D LTR MaLR 1 491 -14 990 204 58 119 chr10 27858774 27859151 -117730137 - MLT1A1 LTR MaLR -11 354 1 571 164 82 9 chr10 27859160 27859270 -117730018 + MLT1D-int LTR MaLR 2 119 -1252 1231 251 130 14 chr10 27859641 27860063 -117729225 + MER20B DNA MER1_type 124 594 -189 434 123 86 12 chr10 27860061 27860142 -117729146 - LTR52 LTR ERVL -29 392 306 * 5242 132 19 12 chr10 27860143 27860949 -117728339 + L1MC2 LINE L1 5532 6342 -2 434 300 130 22 chr10 27861013 27861290 -117727998 + L1MC/D LINE L1 5283 5589 -2219 551 240 8 8 chr10 27861290 27861411 -117727877 - MLT1E LTR MaLR 0 593 473 1667 228 39 3 chr10 27861423 27861969 -117727319 + Charlie1 DNA MER1_type 1817 2454 -307 206 130 19 37 chr10 27863608 27863662 -117725626 + (TTTG)n Simple_repeat Simple_repeat 3 55 0 597 190 0 17 chr10 27865417 27865533 -117723755 - AluSg/x SINE Alu -2 310 197 3086 118 7 16 chr10 27868092 27868541 -117720747 - MER65A LTR ERV1 0 445 1 890 97 0 0 chr10 27870532 27870645 -117718643 - AluSg/x SINE Alu -13 299 187 21 0 0 0 chr10 27870897 27870918 -117718370 + AT_rich Low_complexity Low_complexity 1 21 0 195 300 118 27 chr10 27871268 27871378 -117717910 - L2 LINE L2 -672 2642 2523 2426 96 0 0 chr10 27873904 27874216 -117715072 - AluSx SINE Alu 0 312 1 298 325 91 20 chr10 27874515 27874712 -117714576 - MIR SINE MIR 0 262 52 440 328 41 6 chr10 27875180 27875351 -117713937 + MER5B DNA MER1_type 2 178 0 366 80 0 0 chr10 27876237 27876287 -117713001 + (CA)n Simple_repeat Simple_repeat 1 50 0 1005 186 35 30 chr10 27876320 27876519 -117712769 - MER3 DNA MER1_type 0 209 10 1540 184 87 19 chr10 27876703 27877024 -117712264 - MLT1A1 LTR MaLR 0 365 23 963 280 224 19 chr10 27877031 27877966 -117711322 + L2 LINE L2 1687 2812 -502 1766 96 15 165 chr10 27878046 27878267 -117711021 + MER1B DNA MER1_type 1 139 -2573 1857 109 4 0 chr10 27878267 27878524 -117710764 + AluSx SINE Alu 38 295 -17 1766 96 15 165 chr10 27878524 27878696 -117710592 + MER1B DNA MER1_type 139 335 -4 24 32 0 0 chr10 27879432 27879463 -117709825 + AT_rich Low_complexity Low_complexity 1 31 0 2165 111 3 10 chr10 27879609 27879907 -117709381 + AluSp SINE Alu 1 296 -17 2301 105 0 26 chr10 27879916 27880229 -117709059 + AluSx SINE Alu 1 305 -7 313 260 58 10 chr10 27880802 27880906 -117708382 + L1ME LINE L1 5521 5629 -492 676 278 110 0 chr10 27881052 27881225 -117708063 - MIR SINE MIR -42 220 29 2190 91 6 64 chr10 27881369 27881699 -117707589 + AluY SINE Alu 1 311 0 1296 187 79 18 chr10 27882260 27882538 -117706750 + AluJo SINE Alu 1 295 -17 1908 96 4 0 chr10 27883233 27883484 -117705804 + AluSx SINE Alu 29 280 -32 2241 170 104 18 chr10 27883861 27884314 -117704974 + LTR39 LTR ERV1 1 492 -291 777 172 16 0 chr10 27885066 27885194 -117704094 - FLAM_C SINE Alu -3 130 1 1766 180 0 0 chr10 27885862 27886140 -117703148 + AluSx SINE Alu 3 280 -32 325 151 14 14 chr10 27886142 27886215 -117703073 + GA-rich Low_complexity Low_complexity 3 75 0 6169 33 30 3 chr10 27886693 27887417 -117701871 - L1PA3 LINE L1 0 6155 5412 2684 66 22 19 chr10 27888240 27888602 -117700686 + L1PA11 LINE L1 5686 6048 -126 397 87 0 29 chr10 27888904 27888973 -117700315 + (GGAA)n Simple_repeat Simple_repeat 2 68 0 494 330 110 42 chr10 27888977 27889694 -117699594 - L1 LINE L1 -1098 5048 4283 723 243 119 5 chr10 27889782 27889967 -117699321 + MER58A DNA MER1_type 19 224 0 648 332 55 7 chr10 27890017 27890464 -117698824 - L1 LINE L1 -2013 4133 3666 1666 183 0 30 chr10 27890909 27891210 -117698078 + AluJo SINE Alu 1 292 -20 2019 66 8 0 chr10 27891495 27891739 -117697549 - L1PA8 LINE L1 -15 6157 5912 412 274 65 38 chr10 27892095 27892152 -117697136 - MIR SINE MIR -29 233 179 1726 182 0 26 chr10 27892152 27892460 -117696828 - AluJo SINE Alu -10 302 3 412 274 65 38 chr10 27892460 27892588 -117696700 - MIR SINE MIR -83 179 43 369 217 76 131 chr10 27893129 27893191 -117696097 + LTR41 LTR ERVL 1 65 -708 3727 183 13 37 chr10 27893191 27893956 -117695332 - L1MB8 LINE L1 0 6178 5432 369 217 76 131 chr10 27893956 27894091 -117695197 + LTR41 LTR ERVL 65 187 -586 314 228 84 109 chr10 27894350 27894473 -117694815 + LTR41 LTR ERVL 586 690 -105 1032 147 70 0 chr10 27894473 27894630 -117694658 - FAM SINE Alu -7 168 1 314 228 84 109 chr10 27894630 27894734 -117694554 + LTR41 LTR ERVL 690 795 0 30 0 0 0 chr10 27895797 27895827 -117693461 + AT_rich Low_complexity Low_complexity 1 30 0 270 304 140 14 chr10 27896004 27896218 -117693070 + MIR SINE MIR 20 260 -2 1107 197 38 94 chr10 27896488 27896837 -117692451 + MLT1B LTR MaLR 1 321 -69 5783 145 25 16 chr10 27897581 27898541 -117690747 - LTR5 LTR ERVK 0 969 1 497 267 62 14 chr10 27901975 27902121 -117687167 - L2 LINE L2 -1 3312 3160 270 287 23 0 chr10 27902259 27902346 -117686942 - MER117 DNA MER1_type -64 133 45 1700 218 0 15 chr10 27902408 27902738 -117686550 + MLT1A1 LTR MaLR 1 325 -40 968 133 144 6 chr10 27902738 27902919 -117686369 + MSTA LTR MaLR 1 206 -222 2316 149 56 30 chr10 27902920 27903438 -117685850 - MLT2A2 LTR ERVL 0 554 1 1002 153 139 20 chr10 27903438 27903640 -117685648 + MSTA LTR MaLR 203 428 0 377 67 0 0 chr10 27903640 27903685 -117685603 + MLT1A1 LTR MaLR 321 365 0 2374 95 0 0 chr10 27904189 27904495 -117684793 - AluSg SINE Alu -4 306 1 1999 113 42 0 chr10 27905800 27906084 -117683204 + AluSx SINE Alu 1 296 -16 36 0 0 0 chr10 27906146 27906182 -117683106 + AT_rich Low_complexity Low_complexity 1 36 0 988 114 11 86 chr10 27906352 27906554 -117682734 - AluSg/x SINE Alu 0 310 132 1584 161 0 8 chr10 27906554 27906809 -117682479 - AluSx SINE Alu -22 290 38 1924 146 13 3 chr10 27908104 27908413 -117680875 + AluJb SINE Alu 1 312 0 2554 42 0 10 chr10 27908548 27908855 -117680433 + AluY SINE Alu 1 304 -7 186 43 0 0 chr10 27909232 27909255 -117680033 + (TG)n Simple_repeat Simple_repeat 2 24 0 774 150 45 0 chr10 27910100 27910233 -117679055 - MER2 DNA MER2_type -25 320 182 4523 99 55 68 chr10 27910289 27910726 -117678562 + L1MA4A LINE L1 5362 5785 -518 2196 125 3 0 chr10 27910726 27911031 -117678257 + AluSg SINE Alu 1 306 -4 4523 99 55 68 chr10 27911031 27911381 -117677907 + L1MA4A LINE L1 5785 6138 -165 2097 101 0 0 chr10 27911481 27911748 -117677540 - AluSg SINE Alu -43 267 1 2083 113 0 30 chr10 27912269 27912570 -117676718 + AluSx SINE Alu 1 292 -20 1839 181 7 0 chr10 27912750 27913059 -117676229 - AluJb SINE Alu -1 311 1 458 129 0 0 chr10 27913365 27913435 -117675853 - Alu SINE Alu -1 309 240 * 615 222 0 22 chr10 27913430 27913565 -117675723 + AluY SINE Alu 98 229 -82 1674 91 0 0 chr10 27914059 27914269 -117675019 + AluSg/x SINE Alu 80 289 -21 342 188 139 30 chr10 27914274 27914375 -117674913 + L1MC5 LINE L1 7646 7757 -204 1582 183 0 14 chr10 27914542 27914831 -117674457 - AluJo SINE Alu -14 298 14 25 31 0 0 chr10 27914870 27914902 -117674386 + AT_rich Low_complexity Low_complexity 1 32 0 3640 109 103 26 chr10 27915913 27916959 -117672329 + MER11A LTR ERVK 1 1232 -4 208 231 77 0 chr10 27917509 27917574 -117671714 + L2 LINE L2 3244 3313 0 916 179 109 10 chr10 27917757 27917958 -117671330 + AluJo SINE Alu 85 305 -7 233 88 0 0 chr10 27918306 27918340 -117670948 - L1P LINE L1 -879 5287 5254 * 6629 206 9 10 chr10 27918311 27919706 -117669582 - L1 LINE L1 -864 5282 3889 1756 143 3 40 chr10 27919834 27920134 -117669154 + AluJo SINE Alu 1 289 -23 325 91 0 254 chr10 27920462 27920572 -117668716 - L1MA10 LINE L1 -2 6332 6251 21 0 0 0 chr10 27921094 27921115 -117668173 + GC_rich Low_complexity Low_complexity 1 21 0 1362 180 112 25 chr10 27921753 27922031 -117667257 - AluJo SINE Alu 0 302 1 1284 148 5 0 chr10 27922244 27922440 -117666848 - AluSg/x SINE Alu -16 296 100 282 29 0 0 chr10 27922907 27922942 -117666346 + (CA)n Simple_repeat Simple_repeat 2 36 0 1624 166 34 88 chr10 27923047 27923146 -117666142 + MLT1A1 LTR MaLR 1 104 -261 2306 132 24 32 chr10 27923146 27923524 -117665764 - THE1C LTR MaLR 0 375 1 1624 166 34 88 chr10 27923524 27923703 -117665585 + MLT1A1 LTR MaLR 104 255 -110 2627 190 34 58 chr10 27923703 27924329 -117664959 + LTR9 LTR ERV1 2 612 0 1624 166 34 88 chr10 27924329 27924435 -117664853 + MLT1A1 LTR MaLR 255 365 0 243 0 0 0 chr10 27924584 27924611 -117664677 + (TG)n Simple_repeat Simple_repeat 2 28 0 2043 86 27 38 chr10 27924611 27924903 -117664385 - AluY SINE Alu -22 289 1 382 259 107 56 chr10 27924903 27925119 -117664169 - MIR SINE MIR -13 249 23 5806 65 0 0 chr10 27925605 27926301 -117662987 + L1PA5 LINE L1 5453 6148 -6 2227 123 0 0 chr10 27926463 27926771 -117662517 - AluSx SINE Alu 0 312 5 2287 65 0 0 chr10 27927258 27927533 -117661755 - L1PA5 LINE L1 -1 6153 5879 810 42 0 0 chr10 27927534 27927630 -117661658 + L1PA5 LINE L1 5794 5889 -265 457 277 90 86 chr10 27927918 27927945 -117661343 + L2 LINE L2 1727 1752 -1562 1463 209 11 4 chr10 27927945 27928223 -117661065 - AluJo SINE Alu -32 280 1 457 277 90 86 chr10 27928223 27928718 -117660570 + L2 LINE L2 1752 2251 -1063 656 305 71 20 chr10 27928865 27929160 -117660128 - HERV16 LTR ERVL -4685 311 2 1435 249 26 13 chr10 27929162 27929548 -117659740 - LTR16A LTR ERVL -1 449 59 341 222 170 46 chr10 27929585 27929738 -117659550 + MIR SINE MIR 91 262 0 25 0 0 0 chr10 27929760 27929785 -117659503 + AT_rich Low_complexity Low_complexity 1 25 0 2397 93 0 0 chr10 27929844 27930154 -117659134 - AluY SINE Alu -1 310 1 181 250 76 76 chr10 27930176 27930268 -117659020 + L2 LINE L2 3124 3215 -98 495 289 31 31 chr10 27930377 27930605 -117658683 + L2 LINE L2 567 794 -2520 292 200 24 40 chr10 27931565 27931690 -117657598 + (TA)n Simple_repeat Simple_repeat 1 123 0 3591 75 10 20 chr10 27931873 27932382 -117656906 + L1PA8 LINE L1 5594 6097 -75 332 293 71 87 chr10 27932526 27932862 -117656426 - L1MC/D LINE L1 -2054 5754 5427 5201 81 6 0 chr10 27932862 27933520 -117655768 + L1PA8 LINE L1 5511 6172 0 332 293 71 87 chr10 27933520 27933691 -117655597 - L1MC/D LINE L1 -2381 5427 5255 32 43 0 0 chr10 27933985 27934031 -117655257 + AT_rich Low_complexity Low_complexity 1 46 0 230 81 27 0 chr10 27934041 27934078 -117655210 + (TCTA)n Simple_repeat Simple_repeat 1 38 0 1013 233 173 67 chr10 27934105 27934435 -117654853 - MSTD LTR MaLR 0 396 1 25 0 0 0 chr10 27935065 27935090 -117654198 + AT_rich Low_complexity Low_complexity 1 25 0 469 332 48 34 chr10 27935101 27935577 -117653711 - L1MC/D LINE L1 -2006 4140 3658 972 166 0 0 chr10 27936006 27936157 -117653131 + FAM SINE Alu 20 170 -15 24 0 0 0 chr10 27936212 27936236 -117653052 + AT_rich Low_complexity Low_complexity 1 24 0 318 233 217 0 chr10 27937053 27937182 -117652106 + L1MCc LINE L1 1378 1534 -4889 243 294 99 41 chr10 27937419 27937640 -117651648 + L1MCc LINE L1 1773 2006 -4925 1856 159 0 0 chr10 27937640 27937917 -117651371 + AluSx SINE Alu 1 277 -35 369 0 0 0 chr10 27937921 27937962 -117651326 + (TAAA)n Simple_repeat Simple_repeat 1 41 0 226 214 0 36 chr10 27937974 27938030 -117651258 + L1MCc LINE L1 2026 2079 -5043 571 217 37 56 chr10 27938195 27938356 -117650932 - MER5B DNA MER1_type -4 174 17 1904 152 0 34 chr10 27938655 27938978 -117650310 + AluSx SINE Alu 1 312 0 364 200 211 0 chr10 27939434 27939529 -117649759 + L1MA8 LINE L1 5989 6103 -188 1085 141 6 0 chr10 27939529 27939692 -117649596 + FRAM SINE Alu 1 158 -18 996 148 38 11 chr10 27939695 27939878 -117649410 + L1MA8 LINE L1 6099 6286 -5 180 0 0 0 chr10 27939879 27939899 -117649389 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1746 125 3 81 chr10 27939903 27940200 -117649088 - AluSx SINE Alu -38 274 1 1666 185 0 30 chr10 27940708 27941010 -117648278 + AluJb SINE Alu 1 293 -19 1010 283 83 26 chr10 27941731 27942081 -117647207 - MLT1J LTR MaLR -30 481 112 286 214 0 29 chr10 27943133 27943203 -117646085 + GA-rich Low_complexity Low_complexity 1 68 0 2088 135 3 0 chr10 27943286 27943583 -117645705 + AluSx SINE Alu 1 298 -14 840 185 0 0 chr10 27943594 27943729 -117645559 + FLAM_C SINE Alu 2 136 -7 1662 201 7 3 chr10 27943739 27944042 -117645246 + AluJo SINE Alu 3 306 -6 756 190 14 7 chr10 27944733 27944875 -117644413 + FRAM SINE Alu 2 144 -32 276 309 94 42 chr10 27944894 27945085 -117644203 - L2 LINE L2 -411 2903 2703 405 369 45 11 chr10 27945100 27945279 -117644009 + MIR SINE MIR 11 195 -67 780 165 8 0 chr10 27945282 27945403 -117643885 + FLAM_C SINE Alu 2 123 -20 631 333 183 0 chr10 27945425 27945785 -117643503 - L2 LINE L2 -605 2709 2284 883 256 70 32 chr10 27945967 27946283 -117643005 + LTR37A LTR ERV1 99 426 0 962 208 15 34 chr10 27946689 27946954 -117642334 + L1M4 LINE L1 4904 5163 -983 2063 137 0 0 chr10 27947226 27947549 -117641739 - AluSx SINE Alu 0 323 1 7966 31 2 0 chr10 27947651 27948924 -117640364 - L1PA4 LINE L1 -6 6149 4875 539 175 0 53 chr10 27949098 27949212 -117640076 + FLAM_A SINE Alu 35 142 0 1682 171 4 7 chr10 27949828 27950108 -117639180 + AluJo SINE Alu 9 287 -25 1555 160 23 4 chr10 27950180 27950436 -117638852 - L1PA16 LINE L1 0 6166 5906 2355 229 38 72 chr10 27950576 27951277 -117638011 - L1ME1 LINE L1 -4 6162 5488 735 157 0 82 chr10 27951277 27951411 -117637877 - FLAM_A SINE Alu -10 123 1 2355 229 38 72 chr10 27951411 27951477 -117637811 - L1ME1 LINE L1 -678 5488 5421 1336 180 85 39 chr10 27951518 27951801 -117637487 + AluJo SINE Alu 1 296 -16 323 302 0 12 chr10 27951808 27951894 -117637394 - MER5B DNA MER1_type -91 87 3 2760 137 66 15 chr10 27952150 27952484 -117636804 + L1MC3 LINE L1 5262 5628 -2157 4089 94 73 25 chr10 27952484 27953088 -117636200 + LTR10E LTR ERV1 1 633 0 2760 137 66 15 chr10 27953088 27953221 -117636067 + L1MC3 LINE L1 5628 5753 -2032 381 73 59 29 chr10 27953221 27953252 -117636036 + MER41D LTR ERV1 1 30 -527 2164 105 34 7 chr10 27953252 27953546 -117635742 - AluSg SINE Alu -8 302 1 381 73 59 29 chr10 27953546 27953582 -117635706 + MER41D LTR ERV1 30 70 -487 2986 171 44 4 chr10 27953582 27954086 -117635202 + MER41D LTR ERV1 29 552 -5 1249 174 0 0 chr10 27954092 27954305 -117634983 + L1MC3 LINE L1 5755 5967 -1818 1921 141 7 0 chr10 27954380 27954664 -117634624 + AluSx SINE Alu 24 309 -3 451 316 46 0 chr10 27955326 27955478 -117633810 + LTR16A LTR ERVL 258 416 -34 252 212 45 0 chr10 27955721 27955787 -117633501 + MLT1K LTR MaLR 509 577 -11 1117 101 0 126 chr10 27955880 27955946 -117633342 + Tigger2a DNA MER2_type 1 74 -2634 2446 80 3 3 chr10 27955946 27956257 -117633031 - AluY SINE Alu 0 311 1 1117 101 0 126 chr10 27956257 27956397 -117632891 + Tigger2a DNA MER2_type 74 181 -253 1668 129 16 4 chr10 27956555 27956810 -117632478 + Tigger2a DNA MER2_type 187 444 0 21 57 0 0 chr10 27957282 27957317 -117631971 + AT_rich Low_complexity Low_complexity 1 35 0 934 162 0 0 chr10 27957487 27957623 -117631665 + MER1A DNA MER1_type 1 136 -391 2654 101 6 8 chr10 27957623 27957988 -117631300 - THE1B LTR MaLR 0 364 1 * 3049 92 8 0 chr10 27957988 27958364 -117630924 + MER1A DNA MER1_type 132 510 -19 351 243 157 0 chr10 27958390 27958530 -117630758 - MLT1F1 LTR MaLR -40 527 366 274 257 103 18 chr10 27958663 27958791 -117630497 - MLT1F1 LTR MaLR -371 178 1 2195 108 0 0 chr10 27959194 27959480 -117629808 - AluSx SINE Alu -18 294 9 407 330 179 18 chr10 27959542 27959821 -117629467 + L2 LINE L2 176 499 -2815 212 200 0 20 chr10 27960021 27960071 -117629217 + T-rich Low_complexity Low_complexity 32 80 0 204 159 23 0 chr10 27960062 27960106 -117629182 + (TTTA)n Simple_repeat Simple_repeat 4 48 0 * 1713 145 58 0 chr10 27960114 27960390 -117628898 - AluJo SINE Alu -20 292 1 286 120 0 40 chr10 27960431 27960481 -117628807 - MER94 DNA DNA -86 48 1 206 319 25 0 chr10 27960549 27960668 -117628620 + L2 LINE L2 774 895 -2419 666 333 58 21 chr10 27960719 27961185 -117628103 + L2 LINE L2 1177 1659 -1655 871 171 12 18 chr10 27961203 27961413 -117627875 + AluJo SINE Alu 120 328 0 1305 316 91 23 chr10 27961413 27961473 -117627815 + L2 LINE L2 1712 1767 -1547 2380 136 31 0 chr10 27961473 27961826 -117627462 + THE1B LTR MaLR 1 364 0 1305 316 91 23 chr10 27961826 27962594 -117626694 + L2 LINE L2 1767 2596 -718 2371 128 35 56 chr10 27962595 27962789 -117626499 + Tigger2a DNA MER2_type 1 198 -2510 1658 169 20 23 chr10 27962789 27963091 -117626197 + AluJo SINE Alu 1 301 -11 2371 128 35 56 chr10 27963091 27963327 -117625961 + Tigger2a DNA MER2_type 198 422 -12 4573 123 22 3 chr10 27963327 27964016 -117625272 + MER50 LTR ERV1 1 702 -32 370 367 107 11 chr10 27964109 27964379 -117624909 + L2 LINE L2 2635 2930 -384 195 255 0 0 chr10 27964381 27964428 -117624860 + L2 LINE L2 2482 2528 -786 1660 169 11 22 chr10 27964460 27964732 -117624556 - AluJo SINE Alu -38 274 6 1009 301 62 24 chr10 27964737 27965204 -117624084 + L2 LINE L2 2516 3001 -312 704 287 58 12 chr10 27965299 27965602 -117623686 + L2 LINE L2 2728 3043 -270 344 60 20 0 chr10 27965606 27965656 -117623632 - MER50 LTR ERV1 -544 190 140 196 30 61 0 chr10 27965674 27965707 -117623581 + (TAAA)n Simple_repeat Simple_repeat 4 38 0 763 81 65 0 chr10 27965708 27965832 -117623456 + Tigger2a DNA MER2_type 195 326 -118 729 104 0 9 chr10 27965834 27965940 -117623348 - MER50 LTR ERV1 -629 105 1 1441 134 28 28 chr10 27965940 27966194 -117623094 - Tigger2 DNA MER2_type -12 2706 2453 323 253 66 36 chr10 27966206 27966372 -117622916 + L2 LINE L2 3057 3227 -86 624 266 60 52 chr10 27966668 27966920 -117622368 - L1MC/D LINE L1 -2077 5731 5478 270 0 0 0 chr10 27967324 27967354 -117621934 + (TAAAA)n Simple_repeat Simple_repeat 1 30 0 273 299 24 39 chr10 27969182 27969309 -117619979 + MIR3 SINE MIR 43 167 -41 23 0 0 0 chr10 27969945 27969968 -117619320 + AT_rich Low_complexity Low_complexity 1 23 0 199 271 157 0 chr10 27970977 27971047 -117618241 - MIR SINE MIR -142 120 40 229 230 115 106 chr10 27971742 27971855 -117617433 - L1ME3 LINE L1 -81 6081 5968 1399 110 0 11 chr10 27972162 27972353 -117616935 + AluSx SINE Alu 1 189 -123 1441 165 31 39 chr10 27972827 27973087 -117616201 - AluJb SINE Alu -54 258 1 1549 230 228 29 chr10 27973134 27973895 -117615393 - L2 LINE L2 -40 3273 2346 337 243 39 29 chr10 27973960 27974063 -117615225 - MIR SINE MIR -89 173 70 2182 96 0 4 chr10 27974073 27974345 -117614943 + AluSc SINE Alu 7 277 -32 746 50 0 10 chr10 27974346 27974446 -117614842 + (GAAA)n Simple_repeat Simple_repeat 2 100 0 814 126 7 63 chr10 27974661 27974804 -117614484 - FLAM_C SINE Alu -7 136 2 780 160 112 0 chr10 27975978 27976103 -117613185 + FRAM SINE Alu 1 139 -37 293 42 0 42 chr10 27976105 27976153 -117613135 + (TAGA)n Simple_repeat Simple_repeat 1 46 0 316 305 0 24 chr10 27976155 27976237 -117613051 - L2 LINE L2 -93 3179 3100 2187 82 10 16 chr10 27976345 27976650 -117612638 + AluY SINE Alu 5 307 -4 407 218 0 0 chr10 27976884 27976971 -117612317 - MER33 DNA MER1_type 0 324 238 456 169 14 0 chr10 27976975 27977046 -117612242 - AluJ/FRAM SINE Alu -17 295 224 850 143 24 0 chr10 27977055 27977181 -117612107 - FLAM_C SINE Alu -10 133 5 38 51 0 0 chr10 27977368 27977427 -117611861 + AT_rich Low_complexity Low_complexity 1 59 0 801 145 0 8 chr10 27977457 27977574 -117611714 - AluJb SINE Alu -178 134 19 906 138 31 0 chr10 27977583 27977742 -117611546 - MER33 DNA MER1_type -160 164 1 207 146 0 0 chr10 27978534 27978575 -117610713 + (TG)n Simple_repeat Simple_repeat 1 41 0 286 273 162 0 chr10 27978675 27978774 -117610514 - MIR SINE MIR 0 262 148 1729 171 14 0 chr10 27978979 27979265 -117610023 + AluJo SINE Alu 3 292 -20 361 182 15 0 chr10 27979462 27979528 -117609760 + MIR SINE MIR 183 249 -13 2160 117 0 19 chr10 27979937 27980245 -117609043 - AluSx SINE Alu -10 302 1 30 27 0 0 chr10 27980385 27980422 -117608866 + AT_rich Low_complexity Low_complexity 1 37 0 812 152 0 8 chr10 27980513 27980638 -117608650 - FLAM_C SINE Alu -19 124 1 251 342 8 17 chr10 27980919 27981036 -117608252 + MIR3 SINE MIR 89 204 -4 338 189 78 22 chr10 27981476 27981566 -117607722 - MIR SINE MIR -96 166 72 350 264 168 0 chr10 27981778 27981903 -117607385 + MIR SINE MIR 101 246 -16 1483 153 71 0 chr10 27981923 27982178 -117607110 - L1PB4 LINE L1 0 6156 5884 839 298 52 87 chr10 27982921 27983038 -117606250 + L1MB8 LINE L1 5328 5420 -758 4849 93 61 12 chr10 27983038 27983408 -117605880 + L1MA2 LINE L1 5552 5902 -402 1798 112 0 135 chr10 27983408 27983764 -117605524 + AluSg1 SINE Alu 1 308 -1 4849 93 61 12 chr10 27983764 27984098 -117605190 + L1MA2 LINE L1 5902 6304 0 839 298 52 87 chr10 27984098 27984198 -117605090 + L1MB8 LINE L1 5420 5522 -656 2065 81 50 11 chr10 27984496 27984779 -117604509 + AluSg SINE Alu 1 294 -16 1570 169 49 20 chr10 27984972 27985479 -117603809 + L1MB8 LINE L1 5565 6139 -39 209 354 33 74 chr10 27985578 27985821 -117603467 - L2 LINE L2 -400 2914 2682 1018 154 0 0 chr10 27985852 27986008 -117603280 + AluJb SINE Alu 147 302 -10 323 341 116 0 chr10 27986816 27986989 -117602299 + MIR SINE MIR 68 260 -2 1348 245 142 18 chr10 27986997 27987504 -117601784 - MLT1G LTR MaLR 0 590 21 821 178 0 0 chr10 27987621 27987756 -117601532 + AluJo SINE Alu 1 135 -177 1681 205 0 0 chr10 27987756 27988049 -117601239 + AluJo SINE Alu 1 293 -19 971 94 0 16 chr10 27988181 27988308 -117600980 - AluSq/x SINE Alu -188 125 1 539 181 21 0 chr10 27988489 27988583 -117600705 - MER5A DNA MER1_type 0 189 94 1137 200 0 19 chr10 27988588 27988798 -117600490 + AluJo SINE Alu 77 282 -30 368 167 119 36 chr10 27988811 27988895 -117600393 - MER5A DNA MER1_type -98 91 1 403 299 157 10 chr10 27989057 27989261 -117600027 - MIR SINE MIR -7 255 22 620 88 0 0 chr10 27989707 27989787 -117599501 - MADE1 DNA Mariner 0 80 1 578 113 127 0 chr10 27990204 27990346 -117598942 - Tigger3(Golem) DNA MER2_type -504 2525 2366 2061 120 36 3 chr10 27990351 27990652 -117598636 - AluSx SINE Alu -1 311 1 1846 137 7 42 chr10 27990696 27991003 -117598285 - L1PA16 LINE L1 -1 6165 5870 2088 156 11 22 chr10 27991177 27991357 -117597931 + MER47A DNA MER2_type 4 180 -2143 2174 118 0 7 chr10 27991357 27991661 -117597627 + AluSx SINE Alu 1 302 -10 2088 156 11 22 chr10 27991661 27991845 -117597443 + MER47A DNA MER2_type 180 364 -2 774 261 14 24 chr10 27992070 27992288 -117597000 - MIR SINE MIR -9 253 37 2175 101 3 3 chr10 27992787 27993085 -117596203 - AluSc SINE Alu -11 298 1 303 28 0 0 chr10 27993672 27993708 -117595580 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 2121 124 7 7 chr10 27993759 27994066 -117595222 + AluSx SINE Alu 1 307 -5 605 311 95 10 chr10 27994222 27994528 -117594760 - HsTC2 DNA Tc2 -1068 830 499 348 279 47 100 chr10 27994550 27994834 -117594454 - HsTC2 DNA Tc2 -1609 289 28 2177 125 7 0 chr10 27994834 27995137 -117594151 + AluSx SINE Alu 1 305 -7 348 279 47 100 chr10 27995137 27995163 -117594125 - HsTC2 DNA Tc2 -1870 28 2 613 213 45 0 chr10 27995596 27995751 -117593537 + L1MA8 LINE L1 6130 6291 0 2181 126 7 0 chr10 27996224 27996534 -117592754 - AluSx SINE Alu 0 312 1 374 297 64 8 chr10 27996668 27996851 -117592437 + MIR SINE MIR 15 201 -61 1968 134 26 23 chr10 27997065 27997176 -117592112 + AluJo SINE Alu 7 116 -196 1578 110 9 0 chr10 27997176 27997395 -117591893 - AluSg/x SINE Alu -16 296 76 1968 134 26 23 chr10 27997395 27997588 -117591700 + AluJo SINE Alu 116 312 0 325 259 35 17 chr10 27997612 27997728 -117591560 - L1MC4 LINE L1 -6 8036 7919 2370 110 0 0 chr10 27997907 27998217 -117591071 - AluSx SINE Alu -2 310 1 679 226 126 50 chr10 27998230 27998469 -117590819 - L1MC4 LINE L1 -491 7551 7295 189 368 15 0 chr10 27998767 27998835 -117590453 - L2 LINE L2 -44 3228 3160 1126 176 45 10 chr10 27998859 27999058 -117590230 - AluJo SINE Alu -23 289 84 531 299 227 20 chr10 27999072 27999473 -117589815 - L2 LINE L2 0 3313 2830 546 147 0 0 chr10 27999521 27999596 -117589692 + AluS SINE Alu 2 76 -236 1170 107 6 0 chr10 27999596 27999755 -117589533 + AluSc SINE Alu 145 304 -5 447 180 279 6 chr10 27999763 27999924 -117589364 - L2 LINE L2 -1059 2255 2051 532 167 0 211 chr10 27999926 28000153 -117589135 - MER69 DNA AcHobo -1 2525 2347 35 24 0 0 chr10 28000172 28000214 -117589074 + AT_rich Low_complexity Low_complexity 1 42 0 585 213 82 16 chr10 28000497 28000680 -117588608 - MER69 DNA AcHobo -246 2280 2086 260 234 26 39 chr10 28001159 28001236 -117588052 - MER69 DNA AcHobo -1150 76 1 624 223 95 0 chr10 28001238 28001386 -117587902 - L2 LINE L2 -1262 2052 1891 914 118 0 15 chr10 28001431 28001566 -117587722 - FLAM_C SINE Alu 0 143 11 306 331 63 21 chr10 28001575 28001717 -117587571 - L2 LINE L2 -1408 1906 1759 1702 161 25 38 chr10 28002280 28002596 -117586692 - AluJo SINE Alu 0 312 1 387 0 0 0 chr10 28002637 28002680 -117586608 + (TG)n Simple_repeat Simple_repeat 2 44 0 23 0 0 0 chr10 28003487 28003510 -117585778 + AT_rich Low_complexity Low_complexity 1 23 0 2004 107 3 17 chr10 28003636 28003925 -117585363 + AluSq SINE Alu 22 306 -7 498 261 53 37 chr10 28004107 28004295 -117584993 + MIR SINE MIR 72 262 0 1206 181 0 0 chr10 28004517 28004721 -117584567 - AluJo SINE Alu -8 304 101 217 0 0 0 chr10 28005104 28005128 -117584160 + (TTTTG)n Simple_repeat Simple_repeat 1 170 0 2091 96 11 7 chr10 28005128 28005408 -117583880 - AluSx SINE Alu -1 304 1 229 247 169 11 chr10 28006172 28006261 -117583027 + MIR SINE MIR 20 122 -86 387 262 135 14 chr10 28006398 28006539 -117582749 - MIR SINE MIR -48 214 57 938 118 0 22 chr10 28006750 28006885 -117582403 + FLAM_C SINE Alu 1 132 -1 31 0 0 0 chr10 28006890 28006921 -117582367 + AT_rich Low_complexity Low_complexity 1 31 0 180 0 0 0 chr10 28008014 28008034 -117581254 + (TC)n Simple_repeat Simple_repeat 2 21 0 1848 141 17 0 chr10 28009044 28009335 -117579953 - AluJo SINE Alu -16 296 1 2079 130 0 0 chr10 28010545 28010854 -117578434 + AluSx SINE Alu 1 309 0 394 206 152 78 chr10 28011104 28011145 -117578143 + L1MC5 LINE L1 7671 7708 -253 2182 123 0 0 chr10 28011145 28011446 -117577842 + AluSq SINE Alu 1 301 -12 394 206 152 78 chr10 28011446 28011647 -117577641 + L1MC5 LINE L1 7708 7931 -30 2204 125 3 0 chr10 28011799 28012110 -117577178 + AluSx SINE Alu 1 312 0 225 256 209 39 chr10 28012113 28012242 -117577046 - MIR3 SINE MIR -23 185 35 2302 93 0 0 chr10 28012562 28012852 -117576436 - AluSx SINE Alu -10 302 13 5887 148 35 43 chr10 28013299 28014379 -117574909 - MER11C LTR ERVK 0 1071 1 1398 149 0 5 chr10 28014648 28014856 -117574432 - AluJb SINE Alu -21 291 85 2188 128 3 0 chr10 28015348 28015652 -117573636 + AluSg SINE Alu 1 305 -5 2265 108 0 0 chr10 28015799 28016096 -117573192 - AluSc SINE Alu 0 309 13 884 115 0 65 chr10 28016290 28016429 -117572859 + FLAM_C SINE Alu 2 131 -2 460 69 69 0 chr10 28016690 28016806 -117572482 + (TA)n Simple_repeat Simple_repeat 1 124 0 46 33 0 0 chr10 28017584 28017644 -117571644 + AT_rich Low_complexity Low_complexity 1 60 0 1759 156 60 23 chr10 28017708 28018009 -117571279 + AluJo SINE Alu 1 312 0 1707 104 0 0 chr10 28018072 28018294 -117570994 + AluY SINE Alu 1 222 -89 1296 149 0 5 chr10 28018312 28018513 -117570775 - AluSq SINE Alu -113 200 1 1954 113 0 0 chr10 28018805 28019062 -117570226 - AluSx SINE Alu -55 257 1 1997 139 7 0 chr10 28019262 28019557 -117569731 + AluSx SINE Alu 1 297 -15 1713 134 4 12 chr10 28020033 28020287 -117569001 + AluJo SINE Alu 17 268 -44 606 143 0 0 chr10 28020287 28020371 -117568917 + AluSg/x SINE Alu 216 299 -10 2088 164 0 0 chr10 28020964 28021276 -117568012 + AluJb SINE Alu 1 312 0 2300 94 0 3 chr10 28023395 28023693 -117565595 + AluY SINE Alu 1 297 -14 392 151 55 0 chr10 28024013 28024086 -117565202 + L1MA3 LINE L1 6173 6249 -56 2384 94 0 0 chr10 28024389 28024698 -117564590 + AluY SINE Alu 1 309 -2 2263 114 0 7 chr10 28025463 28025769 -117563519 + AluSx SINE Alu 1 304 -8 1597 159 58 7 chr10 28025814 28026091 -117563197 - AluJo SINE Alu -21 291 1 197 211 410 0 chr10 28026408 28026503 -117562785 + L2 LINE L2 1023 1156 -2158 905 126 0 8 chr10 28026553 28026680 -117562608 - FLAM_C SINE Alu -7 126 1 659 305 11 21 chr10 28026680 28026867 -117562421 + L2 LINE L2 1374 1558 -1756 735 267 61 16 chr10 28026882 28027276 -117562012 + L2 LINE L2 2720 3143 -170 1679 157 4 4 chr10 28027305 28027566 -117561722 - AluJo SINE Alu -34 278 18 328 143 0 0 chr10 28027614 28027663 -117561625 + AluJ/FLAM SINE Alu 18 66 -236 228 230 14 54 chr10 28027736 28027810 -117561478 + L2 LINE L2 3214 3284 -29 440 243 209 51 chr10 28028015 28028246 -117561042 - L2 LINE L2 -337 2977 2689 1712 154 13 27 chr10 28028246 28028545 -117560743 + AluJo SINE Alu 1 295 -17 440 243 209 51 chr10 28028545 28028605 -117560683 - L2 LINE L2 -625 2689 2640 25 51 0 0 chr10 28029517 28029556 -117559732 + AT_rich Low_complexity Low_complexity 1 39 0 520 204 54 0 chr10 28030629 28030722 -117558566 + 5S rRNA rRNA 6 103 -18 2219 123 0 0 chr10 28030993 28031303 -117557985 - AluSg SINE Alu 0 310 1 1700 176 0 11 chr10 28031486 28031770 -117557518 + AluJo SINE Alu 1 281 -31 378 0 0 0 chr10 28031770 28031812 -117557476 + (CA)n Simple_repeat Simple_repeat 1 42 0 1943 145 0 10 chr10 28032094 28032383 -117556905 + AluSx SINE Alu 1 286 -26 211 172 0 250 chr10 28032512 28032640 -117556648 + L2 LINE L2 3137 3232 -40 829 136 0 0 chr10 28033046 28033164 -117556124 - FLAM_C SINE Alu -15 118 1 921 157 0 0 chr10 28033657 28033797 -117555491 - AluJb SINE Alu -28 284 145 751 177 197 14 chr10 28034171 28034318 -117554970 + FAM SINE Alu 2 175 0 2021 92 33 11 chr10 28034796 28035069 -117554219 - AluSc SINE Alu -30 279 1 2134 109 3 38 chr10 28035896 28036216 -117553072 - AluSc SINE Alu 0 309 1 312 218 38 45 chr10 28036236 28036369 -117552919 - MLT1J2 LTR MaLR 0 466 351 596 250 14 14 chr10 28036458 28036602 -117552686 - MLT1J LTR MaLR -312 199 56 628 268 59 117 chr10 28036894 28037133 -117552155 - MER34 LTR ERV1 -18 524 273 2956 104 21 52 chr10 28037133 28037309 -117551979 - MER4C LTR ERV1 0 465 285 1931 124 40 7 chr10 28037309 28037608 -117551680 + AluSx SINE Alu 2 310 -2 2956 104 21 52 chr10 28037608 28037910 -117551378 - MER4C LTR ERV1 -180 285 2 628 268 59 117 chr10 28037910 28038226 -117551062 - MER34 LTR ERV1 -269 273 1 620 198 62 62 chr10 28038263 28038490 -117550798 - L1ME3A LINE L1 -39 6131 5905 1056 173 14 36 chr10 28038491 28038711 -117550577 - AluJb SINE Alu -18 294 80 1882 234 22 44 chr10 28038735 28038992 -117550296 - L1ME3A LINE L1 -316 5854 5593 2057 143 7 0 chr10 28038992 28039299 -117549989 - AluSx SINE Alu -3 309 1 1522 109 24 0 chr10 28039301 28039511 -117549777 - AluSg/x SINE Alu -14 298 84 1882 234 22 44 chr10 28039511 28039792 -117549496 - L1ME3A LINE L1 -578 5592 5325 2214 128 103 35 chr10 28040004 28040076 -117549212 - MSTA LTR MaLR 0 428 362 1921 96 0 57 chr10 28040076 28040356 -117548932 + AluSq SINE Alu 38 301 -12 2214 128 103 35 chr10 28040356 28040680 -117548608 - MSTA LTR MaLR -66 362 5 434 153 0 214 chr10 28041048 28041179 -117548109 + AluJb SINE Alu 1 103 -209 984 251 0 18 chr10 28041179 28041406 -117547882 + MSTD LTR MaLR 174 396 0 2438 180 136 103 chr10 28042678 28042809 -117546479 - Charlie2 DNA MER1_type -1 2861 2736 2256 115 0 0 chr10 28042809 28043097 -117546191 - AluSx SINE Alu -24 288 1 2438 180 136 103 chr10 28043097 28043250 -117546038 - Charlie2 DNA MER1_type -126 2736 2589 1276 179 27 0 chr10 28043250 28043473 -117545815 - L1MC1 LINE L1 0 6333 6105 2438 180 136 103 chr10 28043473 28043781 -117545507 - Charlie2 DNA MER1_type -273 2589 2293 2097 87 55 45 chr10 28043781 28044091 -117545197 + AluSq SINE Alu 1 313 0 2438 180 136 103 chr10 28044091 28044439 -117544849 - Charlie2 DNA MER1_type -569 2293 1888 483 273 212 0 chr10 28044452 28044650 -117544638 - Charlie2 DNA MER1_type -2532 330 91 767 176 15 15 chr10 28044733 28044864 -117544424 + FLAM_C SINE Alu 1 131 -2 640 224 203 10 chr10 28045048 28045403 -117543885 + MER39 LTR ERV1 9 469 -238 1755 187 17 28 chr10 28045447 28045800 -117543488 - MER4D LTR ERV1 -8 895 547 683 182 6 12 chr10 28045799 28045947 -117543341 - MER4E LTR ERV1 -589 283 28 * 291 157 0 0 chr10 28045964 28046015 -117543273 + CT-rich Low_complexity Low_complexity 2 52 0 1862 155 28 0 chr10 28046047 28046338 -117542950 + AluJb SINE Alu 1 299 -13 896 179 27 11 chr10 28046358 28046542 -117542746 + MER39 LTR ERV1 521 707 0 1177 228 131 60 chr10 28046669 28047164 -117542124 - MER39 LTR ERV1 0 707 1 350 232 36 72 chr10 28047451 28047479 -117541809 - L1ME4a LINE L1 0 6121 6094 2207 92 0 3 chr10 28047479 28047783 -117541505 + AluSc SINE Alu 1 303 0 350 232 36 72 chr10 28047783 28047891 -117541397 - L1ME4a LINE L1 -27 6094 5989 1950 139 23 7 chr10 28048306 28048607 -117540681 + AluJo SINE Alu 1 306 -6 2354 98 3 0 chr10 28048726 28049032 -117540256 - AluSq SINE Alu -6 307 1 443 258 15 22 chr10 28049117 28049305 -117539983 - MLT1H LTR MaLR -221 192 36 240 357 110 34 chr10 28049341 28049604 -117539684 + L2 LINE L2 2870 3152 -120 1805 165 0 0 chr10 28049695 28049968 -117539320 + AluJo SINE Alu 1 273 -39 2148 138 0 6 chr10 28050668 28050979 -117538309 - AluSx SINE Alu -1 311 3 619 152 0 0 chr10 28051128 28051227 -117538061 - L1MB4 LINE L1 0 6180 6082 844 173 0 8 chr10 28051269 28051402 -117537886 - FLAM_A SINE Alu -1 132 1 2468 71 0 0 chr10 28051450 28051744 -117537544 + AluSg SINE Alu 1 294 -16 533 248 118 7 chr10 28051761 28051914 -117537374 + MIR SINE MIR 64 233 -29 1886 128 57 4 chr10 28052112 28052393 -117536895 + AluSg SINE Alu 1 296 -14 2504 54 0 0 chr10 28052427 28052721 -117536567 + AluY SINE Alu 1 294 -17 966 157 13 7 chr10 28052843 28052996 -117536292 + FRAM SINE Alu 2 155 -21 479 252 224 0 chr10 28053013 28053160 -117536128 - MER5A DNA MER1_type -8 181 2 1930 147 0 26 chr10 28053513 28053820 -117535468 - AluJo SINE Alu -2 310 12 251 248 74 33 chr10 28053996 28054117 -117535171 + Charlie8 DNA MER1_type 116 241 -2176 861 165 0 0 chr10 28055221 28055354 -117533934 + FLAM_A SINE Alu 1 133 0 300 192 10 101 chr10 28055504 28055603 -117533685 + Charlie8 DNA MER1_type 123 212 -2205 28 71 0 0 chr10 28056134 28056190 -117533098 + AT_rich Low_complexity Low_complexity 1 56 0 24 32 0 0 chr10 28056318 28056349 -117532939 + AT_rich Low_complexity Low_complexity 1 31 0 1897 101 14 0 chr10 28056358 28056634 -117532654 - L1MA1 LINE L1 0 6302 6023 313 276 191 13 chr10 28056796 28056948 -117532340 - MIR SINE MIR -81 181 3 1792 144 6 58 chr10 28057626 28057952 -117531336 - AluJb SINE Alu -3 309 1 387 295 105 57 chr10 28058620 28058692 -117530596 + L1ME4a LINE L1 3997 4064 -2082 2025 148 0 3 chr10 28058692 28058995 -117530293 + AluSx SINE Alu 1 302 -10 387 295 105 57 chr10 28058995 28059402 -117529886 + L1ME4a LINE L1 4064 4515 -1631 2480 67 0 3 chr10 28059402 28059699 -117529589 + AluSg SINE Alu 1 296 -14 387 295 105 57 chr10 28059699 28059809 -117529479 + L1ME4a LINE L1 4515 4618 -1528 365 248 81 6 chr10 28060007 28060168 -117529120 + L1ME4a LINE L1 4882 5054 -1092 1701 174 16 7 chr10 28060170 28060474 -117528814 + AluJo SINE Alu 1 307 -5 431 111 0 14 chr10 28060484 28060556 -117528732 + (GGAA)n Simple_repeat Simple_repeat 2 72 0 365 278 125 44 chr10 28060557 28061335 -117527953 + L1ME4a LINE L1 5040 5885 -236 636 155 0 0 chr10 28061335 28061432 -117527856 + AluJ/FLAM SINE Alu 2 98 -214 33 0 0 0 chr10 28061533 28061566 -117527722 + AT_rich Low_complexity Low_complexity 1 33 0 1193 89 0 0 chr10 28062219 28062377 -117526911 - L1MA5A LINE L1 0 6297 6140 1789 174 3 0 chr10 28063209 28063497 -117525791 - AluJb SINE Alu -23 289 1 21 57 0 0 chr10 28063835 28063870 -117525418 + AT_rich Low_complexity Low_complexity 1 35 0 963 177 62 29 chr10 28063904 28064113 -117525175 + MER20 DNA MER1_type 1 216 -3 2161 119 3 3 chr10 28064226 28064538 -117524750 + AluSx SINE Alu 1 312 0 209 227 0 106 chr10 28064563 28064629 -117524659 + L2 LINE L2 3208 3266 -47 * 688 272 141 12 chr10 28064626 28064946 -117524342 - L2 LINE L2 -58 3255 2895 266 234 16 0 chr10 28065082 28065146 -117524142 - MIR SINE MIR -179 83 19 295 306 111 0 chr10 28065353 28065461 -117523827 + MER5A DNA MER1_type 7 126 -63 2183 96 0 51 chr10 28066384 28066520 -117522768 + AluSx SINE Alu 1 142 -170 2797 19 0 0 chr10 28066520 28066831 -117522457 + AluY SINE Alu 1 311 0 2183 96 0 51 chr10 28066831 28067008 -117522280 + AluSx SINE Alu 142 298 -14 296 325 152 10 chr10 28067097 28067294 -117521994 + MIR SINE MIR 38 262 0 674 178 76 0 chr10 28067327 28067445 -117521843 - MER5A DNA MER1_type 0 189 63 6380 209 84 76 chr10 28067469 28068447 -117520841 - L1MA6 LINE L1 -1 7259 6290 2237 99 0 16 chr10 28068447 28068786 -117520502 - AluSq SINE Alu 0 313 1 6380 209 84 76 chr10 28068786 28069228 -117520060 - L1MA6 LINE L1 -970 6290 5853 1194 163 0 0 chr10 28069228 28069430 -117519858 - L1PA4 LINE L1 -1 6154 5953 6380 209 84 76 chr10 28069430 28071105 -117518183 - L1MA6 LINE L1 -1407 5853 3996 3127 254 82 26 chr10 28071097 28072655 -117516633 - L1MA6 LINE L1 -4095 2011 68 * 653 248 22 63 chr10 28072801 28073023 -117516265 + L2 LINE L2 3084 3296 -17 537 110 0 0 chr10 28073025 28073107 -117516181 + (TGGA)n Simple_repeat Simple_repeat 3 84 0 1813 162 7 7 chr10 28073156 28073446 -117515842 + AluJo SINE Alu 1 290 -22 1740 187 3 3 chr10 28073455 28073802 -117515486 + AluJo SINE Alu 1 347 0 2491 71 0 0 chr10 28074162 28074459 -117514829 - AluSg SINE Alu -13 297 1 283 271 38 90 chr10 28074482 28074509 -117514779 - L2 LINE L2 0 3313 3286 1684 170 0 21 chr10 28074509 28074797 -117514491 + AluJo SINE Alu 1 282 -30 283 271 38 90 chr10 28074797 28074902 -117514386 - L2 LINE L2 -27 3286 3188 181 302 38 0 chr10 28074899 28074952 -117514336 + L2 LINE L2 1849 1903 -1411 * 903 226 26 107 chr10 28075342 28075687 -117513601 - MLT1C LTR MaLR -2 465 149 2003 145 3 3 chr10 28075726 28076022 -117513266 - AluJo SINE Alu -16 296 1 698 173 49 37 chr10 28076023 28076185 -117513103 - MLT1C LTR MaLR -303 164 1 1673 189 13 0 chr10 28076732 28077038 -117512250 - AluJo SINE Alu -2 310 1 216 296 153 10 chr10 28077134 28077232 -117512056 + MIR3 SINE MIR 87 198 -10 250 231 0 0 chr10 28077533 28077585 -117511703 - L3b LINE CR1 -1 1582 1531 210 114 29 0 chr10 28078786 28078821 -117510467 + MIR SINE MIR 105 140 -122 209 253 200 0 chr10 28078788 28078863 -117510425 + MIR3 SINE MIR 108 197 -11 * 336 24 0 0 chr10 28079264 28079305 -117509983 + (CA)n Simple_repeat Simple_repeat 1 41 0 401 310 43 49 chr10 28079498 28079637 -117509651 - L2 LINE L2 -17 3255 3116 1520 199 14 0 chr10 28079637 28079928 -117509360 + AluJo SINE Alu 3 297 -15 401 310 43 49 chr10 28079928 28079972 -117509316 - L2 LINE L2 -156 3116 3073 1463 148 19 53 chr10 28080428 28080691 -117508597 + AluJo SINE Alu 11 264 -48 1798 105 10 85 chr10 28080747 28081042 -117508246 - AluSx SINE Alu -1 311 39 2369 88 7 0 chr10 28082165 28082503 -117506785 - AluY SINE Alu 0 340 1 348 151 4 0 chr10 28082524 28082599 -117506689 - Alu SINE Alu 0 302 249 186 278 37 0 chr10 28082600 28082654 -117506634 + L3 LINE CR1 437 492 -1085 187 277 21 0 chr10 28082778 28082825 -117506463 + L3 LINE CR1 1064 1111 -466 1677 175 11 0 chr10 28083655 28083964 -117505324 + AluJo SINE Alu 1 312 0 1101 159 0 0 chr10 28084344 28084514 -117504774 + FRAM SINE Alu 1 170 -6 1893 164 0 0 chr10 28085660 28085970 -117503318 + AluSx SINE Alu 3 312 0 1057 212 47 74 chr10 28086753 28087092 -117502196 - MER87 LTR ERV1 -1 540 211 742 155 17 0 chr10 28087280 28087396 -117501892 + FLAM_A SINE Alu 4 121 -12 1641 199 4 0 chr10 28087410 28087691 -117501597 - AluSx SINE Alu -30 282 1 29 47 0 0 chr10 28087691 28087734 -117501554 + AT_rich Low_complexity Low_complexity 1 43 0 828 88 9 0 chr10 28087911 28088024 -117501264 + AluJb SINE Alu 169 282 -30 34 42 0 0 chr10 28088025 28088073 -117501215 + AT_rich Low_complexity Low_complexity 1 48 0 377 317 131 42 chr10 28088163 28088286 -117501002 + L1M2 LINE L1 899 1010 -5839 195 42 0 0 chr10 28088286 28088310 -117500978 + (CCG)n Simple_repeat Simple_repeat 2 25 0 377 317 131 42 chr10 28088310 28088498 -117500790 + L1M2 LINE L1 1010 1238 -5611 21 0 0 0 chr10 28089320 28089341 -117499947 + AT_rich Low_complexity Low_complexity 1 21 0 966 155 72 43 chr10 28090895 28090968 -117498320 - MER30 DNA MER1_type -17 213 144 1654 198 0 3 chr10 28090968 28091256 -117498032 + AluSx SINE Alu 1 287 -25 966 155 72 43 chr10 28091256 28091389 -117497899 - MER30 DNA MER1_type -86 144 1 546 151 0 21 chr10 28091693 28091786 -117497502 + MER65B LTR ERV1 1 91 -440 376 308 139 31 chr10 28092433 28092858 -117496430 - L1MEc LINE L1 -3526 2689 2219 1884 164 0 16 chr10 28092858 28093175 -117496113 - AluJo SINE Alu 0 312 1 243 79 0 0 chr10 28093455 28093493 -117495795 + (CA)n Simple_repeat Simple_repeat 1 38 0 525 298 127 27 chr10 28093526 28094077 -117495211 - L1MEc LINE L1 -4734 1662 1057 2592 159 21 7 chr10 28094082 28094516 -117494772 - L1MC1 LINE L1 0 6333 5894 3369 239 46 37 chr10 28094517 28095609 -117493679 - L1M4 LINE L1 -793 5353 4252 344 259 26 79 chr10 28095942 28096131 -117493157 + L1M4 LINE L1 3878 4056 -2090 1104 273 58 17 chr10 28096158 28096506 -117492782 - MER74A LTR ERVL -17 541 180 850 224 18 0 chr10 28096574 28096744 -117492544 - MER74A LTR ERVL -385 173 1 2189 163 44 21 chr10 28097144 28097573 -117491715 + Tigger6a DNA MER2_type 38 476 -607 241 215 190 0 chr10 28097604 28097683 -117491605 + L1MC5 LINE L1 7287 7380 -581 2356 142 61 17 chr10 28097684 28098058 -117491230 - MSTB LTR MaLR 0 426 31 1832 152 72 36 chr10 28098058 28098420 -117490868 - THE1C LTR MaLR 0 375 1 2356 142 61 17 chr10 28098420 28098453 -117490835 - MSTB LTR MaLR -395 31 1 258 169 52 26 chr10 28098462 28098539 -117490749 + L1MC5 LINE L1 7382 7460 -501 2107 121 0 0 chr10 28098694 28099002 -117490286 + AluSg1 SINE Alu 1 308 0 326 188 70 86 chr10 28099040 28099226 -117490062 + L1MC5 LINE L1 7603 7785 -176 366 203 47 68 chr10 28099267 28099415 -117489873 + L1MC5 LINE L1 7787 7931 -30 2077 118 0 20 chr10 28099528 28099825 -117489463 - AluSq SINE Alu -22 291 1 1506 162 12 0 chr10 28100350 28100597 -117488691 + AluSx SINE Alu 36 285 -27 218 103 0 26 chr10 28101496 28101535 -117487753 + (TA)n Simple_repeat Simple_repeat 2 39 0 650 226 8 0 chr10 28102841 28102965 -117486323 - AluSq/x SINE Alu -186 126 2 261 304 99 32 chr10 28103400 28103565 -117485723 + MIR SINE MIR 36 225 -37 189 167 56 37 chr10 28105325 28105379 -117483909 + MIR3 SINE MIR 118 172 -36 193 147 29 0 chr10 28107200 28107234 -117482054 + MIR SINE MIR 118 152 -56 193 147 29 0 chr10 28109039 28109073 -117480215 + MIR SINE MIR 118 152 -56 1520 162 0 0 chr10 28109202 28109430 -117479858 - AluSx SINE Alu -84 228 1 280 344 115 13 chr10 28109663 28109820 -117479468 + MIR SINE MIR 24 196 -66 184 277 36 24 chr10 28109854 28109937 -117479351 + MIR SINE MIR 166 249 -13 898 193 6 6 chr10 28111860 28112026 -117477262 - L1PB1 LINE L1 -2 6149 5984 1666 179 0 10 chr10 28112030 28112326 -117476962 - AluSx SINE Alu -19 293 1 183 42 0 0 chr10 28112760 28112784 -117476504 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2087 142 0 0 chr10 28112888 28113197 -117476091 - AluSc SINE Alu 0 309 1 25 0 0 0 chr10 28113543 28113568 -117475720 + AT_rich Low_complexity Low_complexity 1 25 0 1770 199 0 0 chr10 28113906 28114213 -117475075 + AluJo SINE Alu 1 307 -5 1831 149 14 3 chr10 28115370 28115665 -117473623 + AluJb SINE Alu 12 309 -3 2119 109 0 3 chr10 28115665 28115986 -117473302 + AluSg SINE Alu 1 320 0 669 126 107 0 chr10 28116147 28116250 -117473038 + AluJb SINE Alu 169 282 -30 32 43 0 0 chr10 28116252 28116298 -117472990 + AT_rich Low_complexity Low_complexity 1 46 0 234 65 0 0 chr10 28116792 28116823 -117472465 - MER30 DNA MER1_type -199 31 1 1622 98 13 27 chr10 28117050 28117274 -117472014 - L1PA10 LINE L1 0 6168 5948 593 118 0 21 chr10 28117361 28117454 -117471834 + MER65A LTR ERV1 1 91 -354 537 295 126 30 chr10 28118060 28118535 -117470753 - L1M4 LINE L1 -3478 2668 2148 1850 164 6 10 chr10 28118544 28118856 -117470432 - AluJo SINE Alu -1 311 1 1772 179 0 7 chr10 28118947 28119243 -117470045 - AluSx SINE Alu -18 294 1 2151 111 0 3 chr10 28119254 28119551 -117469737 - AluSx SINE Alu -16 296 1 2205 93 3 56 chr10 28119704 28120028 -117469260 - AluSc SINE Alu -2 307 1 2017 130 13 3 chr10 28120230 28120529 -117468759 + AluSg SINE Alu 1 302 -8 810 200 30 65 chr10 28120649 28120879 -117468409 + L2 LINE L2 3091 3312 -1 23 0 0 0 chr10 28120990 28121013 -117468275 + AT_rich Low_complexity Low_complexity 1 23 0 234 308 42 25 chr10 28121587 28121707 -117467581 + HAL1 LINE L1 1605 1726 -781 263 299 77 29 chr10 28122191 28122398 -117466890 + L1MEc LINE L1 2240 2456 -3940 2066 105 0 20 chr10 28122618 28122912 -117466376 + AluSx SINE Alu 23 310 -2 1664 178 0 11 chr10 28123542 28123871 -117465417 - AluJb SINE Alu 0 326 1 308 244 100 0 chr10 28124150 28124240 -117465048 - MIR SINE MIR -111 151 53 838 204 0 0 chr10 28124317 28124474 -117464814 - FRAM SINE Alu -18 158 2 24 0 0 0 chr10 28125364 28125388 -117463900 + AT_rich Low_complexity Low_complexity 1 24 0 2941 170 33 27 chr10 28125506 28126053 -117463235 - MER44D DNA MER2_type 0 605 1 218 307 251 7 chr10 28126319 28126606 -117462682 + L3b LINE CR1 1112 1468 -115 1757 136 58 0 chr10 28127001 28127295 -117461993 + L1PA16 LINE L1 5523 5833 -333 * 1884 43 0 9 chr10 28127290 28127523 -117461765 - L1PA4 LINE L1 -79 6076 5846 664 43 0 33 chr10 28127523 28127605 -117461683 + L1PA4 LINE L1 6067 6155 0 2163 115 68 0 chr10 28127613 28127935 -117461353 + L1PA16 LINE L1 5814 6157 -9 26 30 0 0 chr10 28127935 28127968 -117461320 + AT_rich Low_complexity Low_complexity 1 33 0 286 301 51 64 chr10 28128269 28128425 -117460863 - L2 LINE L2 -1 3271 3118 180 308 94 8 chr10 28128843 28128960 -117460328 - L2 LINE L2 -1276 2038 1912 576 56 0 0 chr10 28129046 28129118 -117460170 + L1PA3 LINE L1 6081 6152 -3 21 57 0 0 chr10 28130045 28130080 -117459208 + AT_rich Low_complexity Low_complexity 1 35 0 3017 137 35 4 chr10 28130163 28130654 -117458634 + L1MA9 LINE L1 5802 6307 -5 1914 104 6 130 chr10 28130874 28131219 -117458069 + AluSq SINE Alu 1 302 -1 38 0 0 0 chr10 28131220 28131258 -117458030 + AT_rich Low_complexity Low_complexity 1 38 0 832 172 8 0 chr10 28131907 28132029 -117457259 + FLAM_C SINE Alu 2 124 -19 340 261 60 45 chr10 28132297 28132340 -117456948 - MIR3 SINE MIR -17 191 150 1755 137 9 70 chr10 28132340 28132668 -117456620 - AluJo SINE Alu -4 308 1 340 261 60 45 chr10 28132668 28132758 -117456530 - MIR3 SINE MIR -58 150 56 819 216 0 0 chr10 28133217 28133370 -117455918 + MLT1A1 LTR MaLR 1 153 -212 2498 65 7 0 chr10 28133764 28134071 -117455217 + AluY SINE Alu 1 309 -2 1342 203 29 14 chr10 28134253 28134534 -117454754 - AluJo SINE Alu -12 300 16 391 367 77 0 chr10 28134622 28134818 -117454470 + MIR SINE MIR 52 262 0 236 368 30 77 chr10 28134845 28134935 -117454353 + L2 LINE L2 2989 3082 -190 3042 91 66 5 chr10 28134935 28135362 -117453926 + MLT2A2 LTR ERVL 1 453 0 236 368 30 77 chr10 28135362 28135505 -117453783 + L2 LINE L2 3082 3211 -61 2130 123 0 3 chr10 28135980 28136290 -117452998 + AluSx SINE Alu 1 309 -3 1812 109 0 116 chr10 28136290 28136641 -117452647 + AluSx SINE Alu 1 315 0 197 105 0 26 chr10 28137608 28137646 -117451642 + (TA)n Simple_repeat Simple_repeat 2 38 0 695 208 0 0 chr10 28138871 28138996 -117450292 - FLAM_C SINE Alu -17 126 2 276 336 47 16 chr10 28139437 28139565 -117449723 + MIR SINE MIR 48 179 -83 691 208 0 0 chr10 28141738 28141863 -117447425 - AluJb SINE Alu -186 126 2 403 296 153 6 chr10 28142276 28142452 -117446836 + MIR SINE MIR 24 225 -37 693 224 0 0 chr10 28144304 28144429 -117444859 - FLAM_C SINE Alu -17 126 2 263 304 43 26 chr10 28144864 28144979 -117444309 + MIR SINE MIR 36 152 -56 181 196 54 36 chr10 28146749 28146805 -117442483 + MIR3 SINE MIR 116 172 -36 814 201 18 6 chr10 28148985 28149149 -117440139 - L1PB1 LINE L1 -2 6149 5984 1558 192 0 10 chr10 28149153 28149450 -117439838 - AluSx SINE Alu -18 294 1 2083 112 0 0 chr10 28149976 28150304 -117438984 - AluSc SINE Alu 0 328 1 1354 209 0 0 chr10 28150947 28151200 -117438088 + AluJo SINE Alu 53 305 -7 1859 155 3 0 chr10 28152340 28152630 -117436658 + AluJb SINE Alu 3 293 -19 2057 100 4 4 chr10 28152630 28152963 -117436325 + AluSg SINE Alu 1 333 0 655 123 75 0 chr10 28153127 28153233 -117436055 + AluJb SINE Alu 169 282 -30 28 61 0 0 chr10 28153235 28153284 -117436004 + AT_rich Low_complexity Low_complexity 1 49 0 2613 51 0 6 chr10 28153932 28154243 -117435045 - AluY SINE Alu -2 309 1 730 160 216 44 chr10 28154577 28154654 -117434634 - MER30 DNA MER1_type -17 213 151 1897 147 3 3 chr10 28154654 28154939 -117434349 + AluSx SINE Alu 5 289 -23 730 160 216 44 chr10 28154939 28155042 -117434246 - MER30 DNA MER1_type -79 151 2 1552 116 14 0 chr10 28155289 28155496 -117433792 - L1PA10 LINE L1 -11 6157 5948 576 129 0 21 chr10 28155583 28155676 -117433612 + MER65B LTR ERV1 1 91 -440 386 296 148 30 chr10 28156281 28156747 -117432541 - L1MEc LINE L1 -3478 2737 2217 1746 175 10 3 chr10 28156764 28157072 -117432216 - AluJo SINE Alu -2 310 1 204 40 0 0 chr10 28157362 28157387 -117431901 + (CA)n Simple_repeat Simple_repeat 2 26 0 369 0 0 0 chr10 28157549 28157590 -117431698 + (CA)n Simple_repeat Simple_repeat 2 42 0 502 281 123 38 chr10 28157595 28158178 -117431110 - L1MEc LINE L1 -4708 1688 1056 2739 167 27 2 chr10 28158182 28158661 -117430627 - L1MC1 LINE L1 0 6333 5843 1102 219 190 11 chr10 28158661 28159040 -117430248 - MSTB2 LTR MaLR -10 447 1 418 152 0 51 chr10 28159071 28159150 -117430138 - AluS SINE Alu -10 299 225 3917 202 29 37 chr10 28159150 28160743 -117428545 - L1MC1 LINE L1 -519 5825 4252 291 264 54 72 chr10 28161073 28161240 -117428048 + L1P LINE L1 3878 4041 -2105 1509 223 19 22 chr10 28161282 28161650 -117427638 - MER74A LTR ERVL -13 545 179 902 199 36 0 chr10 28161700 28161866 -117427422 - MER74A LTR ERVL -386 172 1 2071 181 67 0 chr10 28162238 28162642 -117426646 + Tigger6a DNA MER2_type 38 468 -615 229 180 140 20 chr10 28162633 28162683 -117426605 + Tigger6a DNA MER2_type 707 762 -321 * 2186 156 68 29 chr10 28162760 28163136 -117426152 - MSTB LTR MaLR 0 426 31 1832 140 76 36 chr10 28163136 28163493 -117425795 - THE1C LTR MaLR -4 371 1 2186 156 68 29 chr10 28163493 28163526 -117425762 - MSTB LTR MaLR -395 31 1 518 206 31 140 chr10 28163526 28163948 -117425340 + L1MC5 LINE L1 7377 7752 -209 317 255 14 55 chr10 28164019 28164164 -117425124 + L1MC5 LINE L1 7790 7928 -33 1803 129 0 14 chr10 28164761 28165041 -117424247 + AluSx SINE Alu 36 311 -1 375 327 18 6 chr10 28166612 28166780 -117422508 + MER117 DNA MER1_type 2 171 -26 289 251 0 135 chr10 28166971 28167064 -117422224 - L1ME3A LINE L1 -223 5947 5884 1655 158 32 7 chr10 28167064 28167343 -117421945 + AluJo SINE Alu 1 286 -26 289 251 0 135 chr10 28167343 28167412 -117421876 - L1ME3A LINE L1 -286 5884 5807 312 250 107 36 chr10 28167419 28167559 -117421729 + L1MEd LINE L1 561 710 -5409 24 32 0 0 chr10 28167768 28167799 -117421489 + AT_rich Low_complexity Low_complexity 1 31 0 1661 83 0 0 chr10 28168902 28169118 -117420170 + AluSq SINE Alu 5 220 -93 408 179 0 0 chr10 28169491 28169558 -117419730 - AluSq/x SINE Alu -191 122 56 1715 164 30 20 chr10 28169592 28169956 -117419332 + AluJo SINE Alu 1 367 0 2291 102 10 0 chr10 28170151 28170456 -117418832 + AluSx SINE Alu 1 308 -4 1940 152 0 7 chr10 28170943 28171233 -117418055 - AluSx SINE Alu -22 290 3 2041 120 7 7 chr10 28171245 28171544 -117417744 - AluSx SINE Alu -13 299 1 1389 101 0 0 chr10 28171886 28172065 -117417223 + AluSg SINE Alu 1 179 -131 264 243 15 36 chr10 28172241 28172348 -117416940 + Alu SINE Alu 233 280 -20 1170 118 6 0 chr10 28172517 28172678 -117416610 - AluSq SINE Alu -18 295 134 2553 45 0 19 chr10 28172678 28172992 -117416296 - AluYb8 SINE Alu -10 308 1 256 167 13 13 chr10 28173278 28173356 -117415932 + (TA)n Simple_repeat Simple_repeat 2 79 0 232 274 131 24 chr10 28173437 28173484 -117415804 - MIR SINE MIR -1 261 220 2322 89 0 0 chr10 28173484 28173775 -117415513 - AluSg SINE Alu -7 303 13 232 274 131 24 chr10 28173775 28173811 -117415477 - MIR SINE MIR -42 220 169 392 184 149 0 chr10 28173870 28173984 -117415304 + L1MB7 LINE L1 6045 6175 -9 1783 163 3 3 chr10 28174950 28175268 -117414020 - AluJo SINE Alu 0 312 1 1590 203 16 16 chr10 28175325 28175635 -117413653 + AluJb SINE Alu 1 310 -2 2216 100 0 0 chr10 28175809 28176099 -117413189 + AluSq SINE Alu 1 290 -23 345 243 103 44 chr10 28176128 28176264 -117413024 - MIR SINE MIR -115 147 4 1117 103 0 0 chr10 28176427 28176583 -117412705 + AluY SINE Alu 136 291 -20 1032 90 0 0 chr10 28176596 28176741 -117412547 + (GGAA)n Simple_repeat Simple_repeat 4 148 0 1699 156 42 10 chr10 28177144 28177433 -117411855 + AluJb SINE Alu 1 298 -14 846 172 12 25 chr10 28177437 28177600 -117411688 + AluJo SINE Alu 1 161 -151 604 226 34 72 chr10 28177600 28177808 -117411480 + L2 LINE L2 3113 3312 -1 196 308 64 13 chr10 28178139 28178217 -117411071 - L2 LINE L2 -59 3254 3173 331 299 97 37 chr10 28179105 28179537 -117409751 + L1MEc LINE L1 2110 2567 -3579 2008 116 0 7 chr10 28179549 28179825 -117409463 + AluSx SINE Alu 24 297 -15 1662 182 0 11 chr10 28180532 28180850 -117408438 - AluJb SINE Alu 0 315 1 317 267 88 18 chr10 28181126 28181245 -117408043 - MIR SINE MIR -61 147 21 880 204 0 0 chr10 28181294 28181451 -117407837 - FRAM SINE Alu -19 157 1 24 0 0 0 chr10 28182343 28182367 -117406921 + AT_rich Low_complexity Low_complexity 1 24 0 2941 167 37 28 chr10 28182485 28183030 -117406258 - MER44D DNA MER2_type 0 605 1 214 318 269 7 chr10 28183297 28183583 -117405705 + L3b LINE CR1 1112 1472 -111 3863 128 55 0 chr10 28183977 28184576 -117404712 + L1PA16 LINE L1 5523 6154 -12 204 97 0 0 chr10 28184581 28184612 -117404676 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 258 320 51 64 chr10 28184919 28185075 -117404213 - L2 LINE L2 -1 3271 3118 181 274 120 34 chr10 28185493 28185610 -117403678 - L2 LINE L2 -1276 2038 1912 3003 144 41 4 chr10 28186689 28187182 -117402106 + L1MA9 LINE L1 5802 6312 0 1955 114 0 57 chr10 28187395 28187748 -117401540 + AluY SINE Alu 1 311 0 1865 127 6 73 chr10 28187756 28188070 -117401218 + AluSq SINE Alu 1 293 -20 32 0 0 0 chr10 28188125 28188157 -117401131 + AT_rich Low_complexity Low_complexity 1 32 0 800 169 8 0 chr10 28188809 28188927 -117400361 + FLAM_C SINE Alu 2 120 -23 359 301 45 57 chr10 28189196 28189238 -117400050 - MIR3 SINE MIR -17 191 150 1696 158 3 47 chr10 28189238 28189595 -117399693 - AluJo SINE Alu 0 344 1 359 301 45 57 chr10 28189595 28189727 -117399561 - MIR3 SINE MIR -58 150 18 2148 184 17 0 chr10 28190145 28190504 -117398784 + MLT1A1 LTR MaLR 1 365 0 2307 96 51 61 chr10 28190577 28190832 -117398456 + L1PA11 LINE L1 5802 6058 -116 792 173 0 43 chr10 28190832 28190971 -117398317 + FLAM_C SINE Alu 1 133 0 1314 171 171 0 chr10 28190977 28191248 -117398040 + AluSx SINE Alu 3 314 0 2307 96 51 61 chr10 28191248 28191359 -117397929 + L1PA11 LINE L1 6063 6172 -2 249 122 20 0 chr10 28191515 28191564 -117397724 - MIR SINE MIR -49 213 164 1551 175 43 0 chr10 28191929 28192209 -117397079 - AluJb SINE Alu -20 292 1 832 191 0 19 chr10 28192720 28192877 -117396411 - AluJb SINE Alu -2 310 157 23 0 0 0 chr10 28192956 28192979 -117396309 + AT_rich Low_complexity Low_complexity 1 23 0 22 70 0 0 chr10 28193358 28193401 -117395887 + AT_rich Low_complexity Low_complexity 1 43 0 423 0 0 0 chr10 28193840 28193887 -117395401 + (TA)n Simple_repeat Simple_repeat 2 48 0 2137 112 3 0 chr10 28193889 28194176 -117395112 - AluSq SINE Alu -25 288 1 372 280 212 15 chr10 28194684 28194948 -117394340 + L1M4 LINE L1 4519 4834 -1312 1516 184 10 33 chr10 28195887 28196192 -117393096 - AluJo SINE Alu -14 298 1 2142 123 7 3 chr10 28196652 28196952 -117392336 - AluSx SINE Alu -7 305 5 315 276 128 100 chr10 28198279 28198757 -117390531 - L1M2 LINE L1 -5701 1148 658 1797 158 0 35 chr10 28199636 28199947 -117389341 + AluJo SINE Alu 1 300 -12 2257 109 0 6 chr10 28200180 28200492 -117388796 - AluSx SINE Alu -2 310 1 499 141 40 20 chr10 28200960 28201059 -117388229 - FLAM_C SINE Alu -3 140 40 805 126 0 0 chr10 28201118 28201229 -117388059 + FLAM_C SINE Alu 1 111 -32 1853 123 33 74 chr10 28201230 28201621 -117387667 + THE1C LTR MaLR 1 375 0 9663 112 66 8 chr10 28201624 28203115 -117386173 + THE1C-int LTR MaLR 4 1580 0 1899 143 66 39 chr10 28203116 28203480 -117385808 + THE1C LTR MaLR 2 375 0 884 153 0 0 chr10 28203490 28203621 -117385667 + FRAM SINE Alu 1 123 -53 283 295 21 0 chr10 28203834 28203929 -117385359 - MIR SINE MIR -16 246 150 183 283 57 19 chr10 28203955 28204008 -117385280 - MIR SINE MIR -197 65 11 398 185 0 0 chr10 28204156 28204221 -117385067 + AluJ/FLAM SINE Alu 1 65 -237 2615 48 0 3 chr10 28204577 28204888 -117384400 + AluY SINE Alu 2 311 0 376 245 43 29 chr10 28204909 28205048 -117384240 - L1ME4a LINE L1 -17 6104 5964 29 21 0 21 chr10 28205579 28205606 -117383682 + AT_rich Low_complexity Low_complexity 1 28 -18 701 153 48 16 chr10 28205606 28205730 -117383558 - FLAM_C SINE Alu -5 128 1 29 21 0 21 chr10 28205730 28205749 -117383539 + AT_rich Low_complexity Low_complexity 28 46 0 30 27 0 0 chr10 28206244 28206281 -117383007 + AT_rich Low_complexity Low_complexity 1 37 0 1930 132 0 0 chr10 28206284 28206549 -117382739 - AluSx SINE Alu -24 288 24 834 189 0 38 chr10 28206924 28207083 -117382205 + FRAM SINE Alu 4 156 -20 322 152 0 0 chr10 28207085 28207131 -117382157 + Alu SINE Alu 1 46 -254 4063 142 29 4 chr10 28207599 28208295 -117380993 - MER50 LTR ERV1 -20 714 2 342 252 139 9 chr10 28208902 28209017 -117380271 + L2 LINE L2 3141 3270 -2 652 134 0 45 chr10 28209538 28209650 -117379638 + FRAM SINE Alu 69 175 -1 2337 94 0 3 chr10 28210074 28210373 -117378915 + AluSq SINE Alu 1 298 -15 2250 105 3 10 chr10 28210667 28210973 -117378315 + AluSg SINE Alu 1 304 -6 837 235 199 35 chr10 28211424 28211790 -117377498 + LTR16A LTR ERVL 25 450 0 2173 110 27 3 chr10 28211850 28212151 -117377137 + AluSx SINE Alu 1 308 -4 2194 104 28 0 chr10 28213064 28213352 -117375936 - AluSx SINE Alu -14 298 3 21 0 0 56 chr10 28214051 28214071 -117375217 + AT_rich Low_complexity Low_complexity 1 20 -14 1979 135 17 0 chr10 28214071 28214360 -117374928 + AluSx SINE Alu 1 294 -18 21 0 0 56 chr10 28214360 28214375 -117374913 + AT_rich Low_complexity Low_complexity 20 34 0 2158 123 0 3 chr10 28214878 28215188 -117374100 - AluSx SINE Alu -2 310 2 2004 128 17 0 chr10 28215699 28215987 -117373301 - AluSx SINE Alu -6 306 14 2362 109 0 0 chr10 28216136 28216439 -117372849 + AluSq SINE Alu 1 303 -10 2061 121 17 3 chr10 28217148 28217437 -117371851 + AluSx SINE Alu 2 294 -18 21 0 0 0 chr10 28218183 28218204 -117371084 + AT_rich Low_complexity Low_complexity 1 21 0 2097 110 31 7 chr10 28218683 28218973 -117370315 + AluSx SINE Alu 1 297 -15 366 23 0 0 chr10 28219084 28219127 -117370161 + (CA)n Simple_repeat Simple_repeat 2 44 0 2058 138 3 0 chr10 28220095 28220393 -117368895 + AluSx SINE Alu 1 299 -13 317 305 105 24 chr10 28220845 28221055 -117368233 - L2 LINE L2 -189 3083 2857 216 349 12 0 chr10 28221052 28221138 -117368150 + MIR3 SINE MIR 98 184 -24 * 1943 161 0 16 chr10 28222233 28222550 -117366738 - AluSx SINE Alu 0 312 1 804 164 0 16 chr10 28223467 28223595 -117365693 + FLAM_C SINE Alu 2 127 -16 2212 103 7 0 chr10 28224452 28224743 -117364545 + AluSx SINE Alu 1 293 -19 220 309 24 12 chr10 28224887 28224971 -117364317 - MIR SINE MIR -79 129 45 1260 96 0 12 chr10 28225156 28225323 -117363965 - AluSg/x SINE Alu -4 308 144 1486 208 68 25 chr10 28225349 28225743 -117363545 - L1MC4 LINE L1 -283 7759 7349 1079 98 0 0 chr10 28225744 28225877 -117363411 + AluSq/x SINE Alu 1 133 -180 2193 107 7 0 chr10 28225880 28226171 -117363117 + AluSq SINE Alu 1 293 -20 311 169 208 0 chr10 28226176 28226253 -117363035 - L1MC4 LINE L1 -690 7352 7260 270 224 142 13 chr10 28226247 28226361 -117362927 - L1MC4 LINE L1 -692 7190 6993 * 1853 197 154 105 chr10 28226667 28226735 -117362553 - L1MC4 LINE L1 -848 6960 6897 2108 124 3 7 chr10 28226735 28227042 -117362246 - AluSx SINE Alu -6 306 1 1853 197 154 105 chr10 28227042 28227725 -117361563 - L1MC4 LINE L1 -911 6897 6249 916 71 94 0 chr10 28227725 28227852 -117361436 - MER85 DNA T2_type 0 139 1 1853 197 154 105 chr10 28227852 28227867 -117361421 - L1MC4 LINE L1 -1559 6249 6236 2640 46 0 0 chr10 28227867 28228171 -117361117 - AluY SINE Alu -7 304 1 1853 197 154 105 chr10 28228171 28228287 -117361001 - L1MC4 LINE L1 -1572 6236 6127 2047 139 7 3 chr10 28228287 28228597 -117360691 + AluJb SINE Alu 1 311 -1 1853 197 154 105 chr10 28228597 28228884 -117360404 - L1MC4 LINE L1 -1681 6127 5816 980 53 0 0 chr10 28228906 28229019 -117360269 + AluSg SINE Alu 21 133 -177 2090 122 3 0 chr10 28229019 28229307 -117359981 + AluSx SINE Alu 1 289 -23 24 0 0 0 chr10 28229307 28229331 -117359957 + AT_rich Low_complexity Low_complexity 1 24 0 1373 265 89 18 chr10 28229331 28229769 -117359519 - L1MC4 LINE L1 -1991 5817 5349 1149 78 0 0 chr10 28229773 28229915 -117359373 - AluSg/x SINE Alu -34 276 135 325 291 78 8 chr10 28230486 28230675 -117358613 + MIR SINE MIR 13 261 -1 1870 73 135 0 chr10 28230798 28231057 -117358231 + AluSx SINE Alu 1 294 -18 1864 146 11 7 chr10 28231652 28231939 -117357349 + AluJo SINE Alu 1 288 -24 493 269 126 9 chr10 28231944 28232167 -117357121 - MIR SINE MIR 0 262 14 295 263 60 45 chr10 28233658 28233791 -117355497 + MIR SINE MIR 58 192 -70 2296 75 31 3 chr10 28235418 28235711 -117353577 + AluSg SINE Alu 9 309 -1 326 298 163 0 chr10 28236204 28236382 -117352906 - MIR SINE MIR -55 207 1 1709 135 53 18 chr10 28237679 28237814 -117351474 + AluJo SINE Alu 1 130 -182 2218 89 10 35 chr10 28237814 28238127 -117351161 + AluY SINE Alu 1 305 -6 1709 135 53 18 chr10 28238127 28238272 -117351016 + AluJo SINE Alu 130 291 -21 609 232 11 89 chr10 28239019 28239162 -117350126 + MER5B DNA MER1_type 4 130 -48 2052 117 6 31 chr10 28239162 28239479 -117349809 + AluSx SINE Alu 1 309 -3 609 232 11 89 chr10 28239479 28239525 -117349763 + MER5B DNA MER1_type 130 178 0 425 229 153 59 chr10 28239661 28239831 -117349457 + MER5A DNA MER1_type 1 186 -3 2295 93 3 7 chr10 28239836 28240136 -117349152 - AluSx SINE Alu -13 299 1 279 333 0 10 chr10 28240738 28240834 -117348454 - MER5B DNA MER1_type -83 95 1 263 233 120 38 chr10 28241746 28241879 -117347409 + HAL1 LINE L1 784 927 -1580 409 309 169 12 chr10 28241886 28242135 -117347153 + HAL1 LINE L1 982 1269 -1238 234 248 130 91 chr10 28242174 28242320 -117346968 + HAL1 LINE L1 1510 1649 -858 268 22 44 22 chr10 28242320 28242365 -117346923 + (TTTTA)n Simple_repeat Simple_repeat 2 47 0 2162 72 7 4 chr10 28242369 28242646 -117346642 - AluSc SINE Alu -31 278 1 234 248 130 91 chr10 28242646 28242724 -117346564 + HAL1 LINE L1 1651 1748 -759 1662 182 0 11 chr10 28242882 28243208 -117346080 - AluJb SINE Alu 0 323 1 317 267 88 18 chr10 28243484 28243603 -117345685 - MIR SINE MIR -61 147 21 880 204 0 0 chr10 28243652 28243809 -117345479 - FRAM SINE Alu -19 157 1 24 0 0 0 chr10 28244701 28244725 -117344563 + AT_rich Low_complexity Low_complexity 1 24 0 2941 167 37 28 chr10 28244842 28245387 -117343901 - MER44D DNA MER2_type 0 605 1 214 318 269 7 chr10 28245654 28245940 -117343348 + L3b LINE CR1 1112 1472 -111 3863 128 55 0 chr10 28246334 28246933 -117342355 + L1PA16 LINE L1 5523 6154 -12 204 97 0 0 chr10 28246938 28246969 -117342319 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 258 320 51 64 chr10 28247276 28247432 -117341856 - L2 LINE L2 -1 3271 3118 181 274 120 34 chr10 28247850 28247967 -117341321 - L2 LINE L2 -1276 2038 1912 3003 144 41 4 chr10 28249046 28249539 -117339749 + L1MA9 LINE L1 5802 6312 0 2197 83 0 62 chr10 28249752 28250077 -117339211 + AluY SINE Alu 1 305 -6 282 204 86 54 chr10 28250351 28250444 -117338844 + HAL1 LINE L1 2218 2313 -194 2375 104 3 0 chr10 28250451 28250759 -117338529 + AluSx SINE Alu 1 309 -3 2054 132 58 23 chr10 28254211 28254559 -117334729 - MER46B DNA MER2_type 0 236 2 1044 224 15 5 chr10 28254616 28254821 -117334467 + MER58A DNA MER1_type 17 223 -1 2153 109 7 0 chr10 28255110 28255404 -117333884 + AluSx SINE Alu 14 309 -3 453 153 0 59 chr10 28255879 28255964 -117333324 - Tigger5 DNA MER2_type -2 2321 2242 332 269 13 0 chr10 28255954 28256032 -117333256 + Tigger5 DNA MER2_type 2242 2320 -3 * 471 179 0 13 chr10 28256032 28256109 -117333179 - Tigger5 DNA MER2_type -2245 78 3 183 344 0 0 chr10 28258665 28258729 -117330559 - MIR SINE MIR -125 137 74 208 245 0 19 chr10 28259013 28259066 -117330222 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 1028 169 17 6 chr10 28259071 28259248 -117330040 - AluJo SINE Alu -50 262 84 203 57 86 0 chr10 28260744 28260779 -117328509 + A-rich Low_complexity Low_complexity 3 40 0 24 85 0 0 chr10 28261080 28261139 -117328149 + AT_rich Low_complexity Low_complexity 1 59 0 189 0 0 0 chr10 28262088 28262109 -117327179 + (CTA)n Simple_repeat Simple_repeat 3 23 0 2299 93 0 3 chr10 28262678 28262978 -117326310 + AluSq SINE Alu 10 308 -5 23 0 0 0 chr10 28264963 28264986 -117324302 + AT_rich Low_complexity Low_complexity 1 23 0 2276 110 3 0 chr10 28265492 28265801 -117323487 + AluSx SINE Alu 1 310 -2 1787 145 23 10 chr10 28265818 28266122 -117323166 - AluJo SINE Alu -4 308 1 23 0 0 0 chr10 28266359 28266382 -117322906 + AT_rich Low_complexity Low_complexity 1 23 0 438 108 0 0 chr10 28266502 28266567 -117322721 + (TA)n Simple_repeat Simple_repeat 1 65 0 421 263 112 13 chr10 28266588 28266820 -117322468 - L1ME3A LINE L1 -223 5947 5693 534 174 47 160 chr10 28266847 28266899 -117322389 - MER5A DNA MER1_type 0 189 133 1886 148 3 7 chr10 28266899 28267190 -117322098 - AluJo SINE Alu -22 290 1 534 174 47 160 chr10 28267190 28267350 -117321938 - MER5A DNA MER1_type -56 133 1 539 203 117 0 chr10 28267358 28267486 -117321802 - Charlie1 DNA MER1_type 0 2761 2619 * 909 252 78 0 chr10 28267479 28267685 -117321603 - Charlie1 DNA MER1_type -2534 227 6 675 289 30 26 chr10 28267690 28267960 -117321328 - L1ME3A LINE L1 -508 5656 5386 21 0 0 0 chr10 28268185 28268206 -117321082 + AT_rich Low_complexity Low_complexity 1 21 0 2164 132 9 12 chr10 28269488 28269830 -117319458 - MER2 DNA MER2_type 0 344 4 807 264 0 6 chr10 28270302 28270469 -117318819 + MER8 DNA MER2_type 2 167 -72 458 138 0 11 chr10 28270499 28270586 -117318702 + (GGGA)n Simple_repeat Simple_repeat 3 88 0 1840 159 33 12 chr10 28271600 28271933 -117317355 + MER58B DNA MER1_type 2 341 0 613 201 87 14 chr10 28272415 28272579 -117316709 + L1ME3A LINE L1 5983 6152 -18 25 21 0 43 chr10 28272626 28272647 -117316641 + AT_rich Low_complexity Low_complexity 1 21 -24 2175 104 3 0 chr10 28272647 28272934 -117316354 + AluSx SINE Alu 1 288 -24 25 21 0 43 chr10 28272934 28272959 -117316329 + AT_rich Low_complexity Low_complexity 21 45 0 2169 95 27 0 chr10 28273146 28273440 -117315848 + AluSp SINE Alu 1 302 -11 21 0 0 0 chr10 28274853 28274874 -117314414 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr10 28277596 28277619 -117311669 + AT_rich Low_complexity Low_complexity 1 23 0 1474 152 91 23 chr10 28277672 28277936 -117311352 + AluJb SINE Alu 1 282 -30 1987 118 38 0 chr10 28278095 28278382 -117310906 - AluSx SINE Alu -14 298 1 27 0 0 0 chr10 28278427 28278454 -117310834 + AT_rich Low_complexity Low_complexity 1 27 0 764 168 172 13 chr10 28278527 28278808 -117310480 + MER93b LTR ERV1 20 371 -2 1249 187 74 21 chr10 28278888 28279214 -117310074 + MER2 DNA MER2_type 1 343 -1 335 252 115 81 chr10 28279571 28279893 -117309395 + L1M4 LINE L1 5002 5334 -812 525 116 63 0 chr10 28280269 28280364 -117308924 + L1MB3 LINE L1 6082 6182 -1 268 284 27 0 chr10 28280730 28280804 -117308484 + (TATG)n Simple_repeat Simple_repeat 2 77 0 1818 155 21 0 chr10 28282380 28282664 -117306624 + AluJb SINE Alu 1 290 -22 21 0 0 0 chr10 28283097 28283118 -117306170 + AT_rich Low_complexity Low_complexity 1 21 0 344 298 66 16 chr10 28283228 28283349 -117305939 - L2 LINE L2 -587 2727 2601 1623 254 95 4 chr10 28283537 28284002 -117305286 + LTR40a LTR ERVL 8 514 -5 1428 244 48 96 chr10 28284008 28285116 -117304172 + HERVL40 LTR ERVL 1 1023 -4507 1352 160 0 30 chr10 28285127 28285358 -117303930 - AluJo SINE Alu -29 283 60 1622 289 52 12 chr10 28285361 28285935 -117303353 + HERVL40 LTR ERVL 1018 1614 -3916 4920 239 60 5 chr10 28285935 28287238 -117302050 + HERVL40 LTR ERVL 2526 3978 -1552 3912 145 103 27 chr10 28287240 28287326 -117301962 + L1MB2 LINE L1 5287 5365 -806 2323 92 0 0 chr10 28287326 28287621 -117301667 + AluSc SINE Alu 1 295 -14 3912 145 103 27 chr10 28287621 28288356 -117300932 + L1MB2 LINE L1 5365 6171 0 2243 221 147 38 chr10 28288361 28288989 -117300299 + HERVL40 LTR ERVL 3965 4660 -870 297 232 50 88 chr10 28289235 28289416 -117299872 + HERVL40 LTR ERVL 2456 2629 -408 489 335 38 9 chr10 28289591 28289907 -117299381 + MER89-int LTR ERV1 6179 6503 -298 * 1246 231 53 12 chr10 28289777 28290120 -117299168 + HERVL40 LTR ERVL 2780 5529 -1 1431 221 52 93 chr10 28290121 28290323 -117298965 + LTR40a LTR ERVL 1 210 -309 2113 123 0 10 chr10 28290323 28290624 -117298664 + AluSx SINE Alu 1 298 -14 1431 221 52 93 chr10 28290624 28290960 -117298328 + LTR40a LTR ERVL 210 517 -2 2008 110 7 20 chr10 28291104 28291403 -117297885 - AluSx SINE Alu -17 295 1 589 327 201 5 chr10 28291667 28292110 -117297178 + L2 LINE L2 2176 2705 -609 2351 118 6 8 chr10 28292868 28293224 -117296064 + THE1A LTR MaLR 1 355 0 2627 46 0 3 chr10 28293515 28293821 -117295467 + AluY SINE Alu 1 305 -6 6548 64 26 16 chr10 28294508 28295413 -117293875 - L1PA12 LINE L1 0 6168 5254 784 112 0 0 chr10 28295424 28295531 -117293757 - U6 snRNA snRNA 0 107 1 1894 167 7 7 chr10 28295671 28295976 -117293312 + AluJb SINE Alu 1 305 -7 522 278 127 20 chr10 28296332 28296735 -117292553 + L1ME3A LINE L1 4551 4996 -1150 438 233 26 78 chr10 28296752 28296945 -117292343 + L1ME3A LINE L1 5769 5951 -219 955 153 45 116 chr10 28298777 28298845 -117290443 + AluJb SINE Alu 85 156 -156 1951 133 40 3 chr10 28298845 28299147 -117290141 + AluSq SINE Alu 1 313 0 955 153 45 116 chr10 28299147 28299320 -117289968 + AluJb SINE Alu 156 309 -3 641 272 11 69 chr10 28299339 28299615 -117289673 + MIR SINE MIR 3 262 0 2238 106 7 0 chr10 28299746 28300048 -117289240 + AluSx SINE Alu 1 304 -8 541 229 29 29 chr10 28300050 28300225 -117289063 + HAL1 LINE L1 1383 1557 -950 2878 154 27 19 chr10 28300249 28300832 -117288456 + L1 LINE L1 4107 4694 -1452 318 120 0 0 chr10 28300834 28300884 -117288404 + AluSc SINE Alu 246 295 -4 582 177 0 0 chr10 28300893 28300989 -117288299 + AluJb SINE Alu 203 298 -14 976 232 46 57 chr10 28300993 28301155 -117288133 + L1MA9 LINE L1 5943 6105 -207 2015 136 31 43 chr10 28301155 28301507 -117287781 + MER7A DNA MER2_type 1 346 0 976 232 46 57 chr10 28301507 28301639 -117287649 + L1MA9 LINE L1 6105 6235 -77 1960 145 49 9 chr10 28301639 28301963 -117287325 - MER1B DNA MER1_type 0 337 1 976 232 46 57 chr10 28301963 28302016 -117287272 + L1MA9 LINE L1 6235 6287 -25 674 220 65 18 chr10 28302052 28302220 -117287068 + MIR SINE MIR 1 176 -86 695 288 33 33 chr10 28302828 28303127 -117286161 + L1MEd LINE L1 103 401 -5804 1915 188 45 19 chr10 28303127 28303547 -117285741 + MLT1D LTR MaLR 71 501 -4 284 242 78 16 chr10 28303719 28303847 -117285441 + L1MEd LINE L1 738 873 -5332 * 298 201 79 50 chr10 28303845 28303984 -117285304 + L1MEd LINE L1 2146 2288 -4108 23 33 0 0 chr10 28304139 28304169 -117285119 + AT_rich Low_complexity Low_complexity 1 30 0 189 0 0 0 chr10 28304889 28304910 -117284378 + (A)n Simple_repeat Simple_repeat 1 21 0 2191 104 0 3 chr10 28304986 28305285 -117284003 + AluSx SINE Alu 1 298 -14 434 206 0 0 chr10 28305287 28305379 -117283909 + L1MC4a LINE L1 7402 7493 -315 766 170 7 0 chr10 28305379 28305514 -117283774 + FLAM_C SINE Alu 1 136 -7 574 214 0 0 chr10 28305514 28305626 -117283662 + AluJb SINE Alu 183 294 -18 1914 90 93 0 chr10 28305632 28305900 -117283388 + AluSp SINE Alu 1 293 -20 943 228 100 53 chr10 28305903 28306149 -117283139 + L1MC4 LINE L1 7567 7833 -209 1959 157 3 0 chr10 28306149 28306454 -117282834 + AluJb SINE Alu 1 306 -6 943 228 100 53 chr10 28306454 28306527 -117282761 + L1MC4 LINE L1 7833 7901 -141 414 303 148 48 chr10 28307536 28307873 -117281415 - LTR33 LTR ERVL -143 378 8 245 326 135 35 chr10 28307924 28308154 -117281134 - L2 LINE L2 -211 3061 2809 371 304 0 51 chr10 28308669 28308807 -117280481 - L2 LINE L2 -24 3289 3159 23 33 0 0 chr10 28308879 28308909 -117280379 + AT_rich Low_complexity Low_complexity 1 30 0 2122 141 0 0 chr10 28308984 28309282 -117280006 + AluSx SINE Alu 1 298 -14 270 299 201 7 chr10 28309530 28309684 -117279604 - MIR SINE MIR -49 213 30 25 0 0 0 chr10 28310295 28310320 -117278968 + AT_rich Low_complexity Low_complexity 1 25 0 358 263 119 31 chr10 28311840 28312000 -117277288 - L1ME LINE L1 -5341 729 556 1888 139 0 30 chr10 28312075 28312376 -117276912 + AluJb SINE Alu 1 292 -20 895 249 120 59 chr10 28312386 28312693 -117276595 - L1ME LINE L1 -5540 530 180 2167 109 14 0 chr10 28312693 28312987 -117276301 + AluSx SINE Alu 1 298 -14 895 249 120 59 chr10 28312987 28313169 -117276119 - L1ME LINE L1 -5890 180 11 2015 106 0 4 chr10 28313351 28313624 -117275664 + AluSx SINE Alu 29 300 -12 2469 64 3 0 chr10 28313871 28314168 -117275120 + AluSx SINE Alu 1 298 -14 1570 193 3 3 chr10 28314183 28314468 -117274820 + AluJo SINE Alu 25 309 -3 955 234 79 69 chr10 28314642 28315098 -117274190 + MER21B LTR ERV1 295 739 -6 1023 221 9 18 chr10 28315386 28315612 -117273676 - MER58A DNA MER1_type 0 224 1 21 0 0 0 chr10 28315696 28315717 -117273571 + AT_rich Low_complexity Low_complexity 1 21 0 346 266 43 0 chr10 28315769 28315863 -117273425 + GA-rich Low_complexity Low_complexity 3 100 0 21 89 0 0 chr10 28315904 28315960 -117273328 + AT_rich Low_complexity Low_complexity 1 56 0 1059 218 123 35 chr10 28316747 28317147 -117272141 - MLT1D LTR MaLR -59 446 12 964 162 26 24 chr10 28317455 28317806 -117271482 - MLT1B LTR MaLR 0 390 3 2139 123 0 20 chr10 28317850 28318151 -117271137 + AluSx SINE Alu 1 295 -17 1359 171 81 8 chr10 28318484 28318869 -117270419 + Charlie1 DNA MER1_type 2343 2755 -6 438 333 36 31 chr10 28319094 28319289 -117269999 + MIR3 SINE MIR 3 198 -10 4217 197 46 34 chr10 28320412 28320512 -117268776 + Tigger6a DNA MER2_type 2 99 -1498 1682 187 3 14 chr10 28320512 28320801 -117268487 + AluJo SINE Alu 4 289 -23 4217 197 46 34 chr10 28320801 28321768 -117267520 + Tigger6a DNA MER2_type 99 1082 -1 306 0 0 0 chr10 28321870 28321904 -117267384 + (TG)n Simple_repeat Simple_repeat 1 34 0 1967 121 22 0 chr10 28321904 28322177 -117267111 - AluSx SINE Alu -33 279 1 260 245 0 0 chr10 28322360 28322413 -117266875 + AluSp SINE Alu 123 175 -128 907 157 30 45 chr10 28322414 28322612 -117266676 + L1MB3 LINE L1 5981 6175 -8 2074 111 0 10 chr10 28322757 28323045 -117266243 + AluSx SINE Alu 1 285 -27 377 263 32 70 chr10 28323127 28323218 -117266070 + L1MEc LINE L1 1787 1880 -4516 1947 115 29 70 chr10 28323218 28323531 -117265757 + AluSx SINE Alu 1 300 -12 377 263 32 70 chr10 28323531 28323584 -117265704 + L1MEc LINE L1 1880 1933 -4463 2102 110 0 36 chr10 28323584 28323892 -117265396 + AluSg1 SINE Alu 1 297 -12 377 263 32 70 chr10 28323892 28324062 -117265226 + L1MEc LINE L1 1933 2090 -4306 1703 232 29 64 chr10 28324148 28324600 -117264688 + L1MEc LINE L1 2384 2804 -3411 3315 124 19 55 chr10 28324600 28325223 -117264065 + L1MA9 LINE L1 5706 6306 -6 1703 232 29 64 chr10 28325223 28325469 -117263819 + L1MEc LINE L1 2804 3057 -3158 2275 84 10 14 chr10 28325470 28325767 -117263521 - AluSg1 SINE Alu -13 296 1 23 0 0 0 chr10 28326213 28326236 -117263052 + AT_rich Low_complexity Low_complexity 1 23 0 2318 90 3 32 chr10 28326410 28326721 -117262567 - AluSp SINE Alu -11 302 1 1930 184 3 7 chr10 28326836 28327146 -117262142 - AluJb SINE Alu -3 309 1 1847 151 3 10 chr10 28327203 28327523 -117261765 + AluJb SINE Alu 1 312 0 342 220 110 0 chr10 28328484 28328602 -117260686 - L1MB7 LINE L1 -9 6175 6045 212 319 163 28 chr10 28328603 28328697 -117260591 + MIR SINE MIR 102 223 -39 2167 104 0 0 chr10 28328697 28328984 -117260304 + AluSg SINE Alu 13 299 -11 212 319 163 28 chr10 28328984 28329030 -117260258 + MIR SINE MIR 223 261 -1 196 135 19 19 chr10 28329122 28329174 -117260114 + (TA)n Simple_repeat Simple_repeat 1 52 0 2228 96 3 0 chr10 28329211 28329514 -117259774 - AluY SINE Alu -7 304 1 2525 69 0 0 chr10 28329787 28330093 -117259195 + AluSq SINE Alu 1 306 -7 2073 140 0 3 chr10 28330217 28330524 -117258764 - AluSg SINE Alu 0 310 5 2124 129 0 0 chr10 28330878 28331173 -117258115 + AluSx SINE Alu 5 299 -13 1863 168 0 10 chr10 28331183 28331474 -117257814 + AluSx SINE Alu 1 288 -24 21 0 0 0 chr10 28331474 28331495 -117257793 + AT_rich Low_complexity Low_complexity 1 21 0 745 138 16 0 chr10 28331719 28331842 -117257446 + FLAM_C SINE Alu 1 125 -8 1662 196 66 0 chr10 28331842 28332235 -117257053 - Tigger6a DNA MER2_type -625 458 40 886 176 74 0 chr10 28332620 28332796 -117256492 + MER74A LTR ERVL 1 189 -369 1217 236 20 10 chr10 28332835 28333208 -117256080 + MER74A LTR ERVL 179 611 -11 378 274 59 87 chr10 28333225 28333444 -117255844 - L1M4 LINE L1 -2090 4056 3844 3671 210 38 10 chr10 28333811 28335315 -117253973 + L1MC1 LINE L1 4284 5825 -519 419 157 0 36 chr10 28335315 28335398 -117253890 + AluS SINE Alu 227 306 -5 335 171 0 61 chr10 28335429 28335511 -117253777 + MSTB2 LTR MaLR 1 77 -351 828 220 34 34 chr10 28335531 28335795 -117253493 + MSTB2 LTR MaLR 184 447 -10 2253 180 31 4 chr10 28335795 28336273 -117253015 + L1MC1 LINE L1 5843 6333 0 405 294 107 18 chr10 28336276 28336836 -117252452 + L1MEc LINE L1 955 1582 -4728 369 0 0 0 chr10 28336865 28336906 -117252382 + (TG)n Simple_repeat Simple_repeat 2 42 0 1937 146 10 10 chr10 28337196 28337505 -117251783 + AluJo SINE Alu 1 309 -3 657 310 139 24 chr10 28337505 28337973 -117251315 + L1MEc LINE L1 2135 2656 -3473 589 97 0 21 chr10 28338572 28338665 -117250623 - MER65B LTR ERV1 -440 91 1 1377 126 18 22 chr10 28338752 28338974 -117250314 + L1PA10 LINE L1 5948 6168 0 626 166 221 44 chr10 28339199 28339302 -117249986 + MER30 DNA MER1_type 1 84 -146 1911 147 3 3 chr10 28339302 28339587 -117249701 - AluSx SINE Alu -23 289 5 626 166 221 44 chr10 28339587 28339664 -117249624 + MER30 DNA MER1_type 84 213 -17 26 64 0 0 chr10 28340633 28340680 -117248608 + AT_rich Low_complexity Low_complexity 1 47 0 770 106 9 0 chr10 28340681 28340794 -117248494 - AluJb SINE Alu -30 282 169 2208 93 0 0 chr10 28340958 28341267 -117248021 - AluSg SINE Alu 0 309 1 1654 166 35 0 chr10 28341267 28341555 -117247733 - AluJb SINE Alu -11 301 3 229 185 123 25 chr10 28342635 28342716 -117246572 + L1MC4 LINE L1 6959 7047 -995 1981 138 3 7 chr10 28342717 28343022 -117246266 + AluSx SINE Alu 1 304 -8 257 183 122 0 chr10 28343160 28343291 -117245997 + L1MC4 LINE L1 7137 7352 -690 2046 131 7 0 chr10 28343296 28343587 -117245701 - AluSq SINE Alu -20 293 1 1102 98 0 0 chr10 28343587 28343720 -117245568 - AluSg1 SINE Alu -176 133 1 257 213 17 148 chr10 28343722 28343952 -117245336 - L1MC5 LINE L1 -380 7581 7382 853 126 132 33 chr10 28343961 28343994 -117245294 + MSTB LTR MaLR 1 29 -397 1725 145 66 38 chr10 28343994 28344359 -117244929 + THE1C LTR MaLR 1 375 0 853 126 132 33 chr10 28344359 28344507 -117244781 + MSTB LTR MaLR 29 200 -226 5616 42 1 0 chr10 28344507 28345671 -117243617 - L1PA5 LINE L1 -202 5952 4788 1424 72 0 0 chr10 28345671 28345851 -117243437 + L1PA5 LINE L1 5966 6146 -8 533 15 15 0 chr10 28345851 28345917 -117243371 + (TA)n Simple_repeat Simple_repeat 1 67 0 1766 171 0 3 chr10 28346953 28347245 -117242043 + AluJb SINE Alu 1 291 -21 213 366 143 17 chr10 28347538 28347713 -117241575 - L2 LINE L2 -4 3268 3072 * 217 306 53 77 chr10 28347681 28348004 -117241284 - L2 LINE L2 -1428 1886 1572 499 174 33 16 chr10 28348269 28348390 -117240898 + MSTA LTR MaLR 185 307 -121 3262 208 46 28 chr10 28348553 28350097 -117239191 + L1MC2 LINE L1 4252 5824 -520 1588 206 10 0 chr10 28350097 28350393 -117238895 + AluSx SINE Alu 1 299 -13 3262 208 46 28 chr10 28350393 28350418 -117238870 + L1MC2 LINE L1 5824 5847 -497 497 151 157 60 chr10 28350429 28350595 -117238693 + MSTC LTR MaLR 1 182 -246 228 143 20 0 chr10 28351299 28351348 -117237940 + MIR SINE MIR 164 213 -49 215 172 125 62 chr10 28351479 28351504 -117237784 + MIR SINE MIR 85 107 -101 5659 107 8 3 chr10 28351504 28351615 -117237673 - L1PA11 LINE L1 -2 6172 6063 215 77 0 26 chr10 28351615 28351654 -117237634 + (TTTA)n Simple_repeat Simple_repeat 2 39 0 1899 126 0 34 chr10 28351654 28351947 -117237341 - AluSx SINE Alu -29 283 1 5659 107 8 3 chr10 28351947 28352961 -117236327 - L1PA11 LINE L1 -110 6064 5037 215 172 125 62 chr10 28352961 28352999 -117236289 + MIR SINE MIR 107 152 -56 236 333 105 43 chr10 28353135 28353345 -117235943 + L2 LINE L2 2811 3033 -239 1834 166 3 10 chr10 28353771 28354073 -117235215 + AluJb SINE Alu 1 300 -12 253 246 0 0 chr10 28354317 28354382 -117234906 + AluJ/FLAM SINE Alu 1 65 -237 1749 144 7 18 chr10 28354382 28354660 -117234628 + AluJo SINE Alu 36 310 -2 24 0 0 0 chr10 28354781 28354805 -117234483 + AT_rich Low_complexity Low_complexity 1 24 0 2494 86 0 0 chr10 28355037 28355340 -117233948 - AluSx SINE Alu -9 303 1 3806 193 37 19 chr10 28355511 28356808 -117232480 + Charlie1a DNA MER1_type 14 1389 -66 2371 113 0 0 chr10 28356809 28357119 -117232169 + AluSg SINE Alu 1 310 0 555 324 221 25 chr10 28357149 28357628 -117231660 - L2 LINE L2 -923 2391 2007 1634 146 54 37 chr10 28357628 28357922 -117231366 - AluJo SINE Alu -13 299 1 555 324 221 25 chr10 28357922 28358443 -117230845 - L2 LINE L2 -1307 2007 1195 544 157 17 17 chr10 28358463 28358578 -117230710 + FLAM_A SINE Alu 20 134 -8 2287 107 3 0 chr10 28358629 28358928 -117230360 + AluSp SINE Alu 1 300 -13 1955 154 0 7 chr10 28359333 28359632 -117229656 + AluSx SINE Alu 1 297 -15 379 245 52 43 chr10 28359636 28359888 -117229400 + L1 LINE L1 3084 3332 -2814 2184 112 0 7 chr10 28359888 28360191 -117229097 + AluSx SINE Alu 1 301 -11 379 245 52 43 chr10 28360191 28360648 -117228640 + L1 LINE L1 3332 3975 -2171 * 1753 218 65 28 chr10 28360647 28361183 -117228105 + L1ME1 LINE L1 5549 6104 -62 700 115 26 0 chr10 28361239 28361352 -117227936 + L1MB4 LINE L1 6065 6180 0 222 323 111 20 chr10 28362359 28362458 -117226830 + MIR3 SINE MIR 78 185 -23 1273 255 81 26 chr10 28362468 28363055 -117226233 + L1MC4a LINE L1 5317 5821 -341 2249 126 19 19 chr10 28363242 28363614 -117225674 - Tigger1 DNA MER2_type -97 2321 1950 745 203 0 23 chr10 28363616 28363744 -117225544 + FLAM_A SINE Alu 2 126 -16 2237 118 0 0 chr10 28363752 28364057 -117225231 + AluSq SINE Alu 1 305 -8 12253 117 41 20 chr10 28364064 28365284 -117224004 - Tigger1 DNA MER2_type -462 1956 763 2318 99 0 3 chr10 28365284 28365586 -117223702 - AluSg SINE Alu -9 301 1 2173 117 0 7 chr10 28365596 28365896 -117223392 - AluY SINE Alu -13 298 1 12253 117 41 20 chr10 28365896 28365956 -117223332 - Tigger1 DNA MER2_type -1663 755 698 2185 120 0 7 chr10 28365956 28366265 -117223023 - AluSg SINE Alu -3 307 1 12253 117 41 20 chr10 28366265 28366888 -117222400 - Tigger1 DNA MER2_type -1720 698 1 29 0 0 0 chr10 28366902 28366931 -117222357 + AT_rich Low_complexity Low_complexity 1 29 0 279 264 25 63 chr10 28367266 28367317 -117221971 + L1MC4a LINE L1 6531 6582 -1226 2575 47 0 0 chr10 28367317 28367613 -117221675 + AluY SINE Alu 1 296 -15 279 264 25 63 chr10 28367613 28367720 -117221568 + L1MC4a LINE L1 6582 6683 -1125 1187 117 58 0 chr10 28367773 28367979 -117221309 + L1MA8 LINE L1 6072 6289 -2 2954 191 146 31 chr10 28368231 28368716 -117220572 - L1ME1 LINE L1 -22 6144 5543 1781 165 7 16 chr10 28368716 28369019 -117220269 + AluJb SINE Alu 5 304 -8 2954 191 146 31 chr10 28369019 28369273 -117220015 - L1ME1 LINE L1 -623 5543 5320 818 148 0 15 chr10 28369273 28369408 -117219880 - FRAM SINE Alu -18 158 26 2126 125 0 0 chr10 28369633 28369929 -117219359 + AluSx SINE Alu 1 296 -16 464 274 31 75 chr10 28369960 28370215 -117219073 - L1MC4 LINE L1 -366 7676 7433 1142 265 26 20 chr10 28370278 28370621 -117218667 - HsTC2b DNA Tc2 -570 345 1 2258 84 0 7 chr10 28370673 28370981 -117218307 + AluY SINE Alu 1 306 0 1039 134 0 7 chr10 28371611 28371760 -117217528 + AluJb SINE Alu 1 148 -164 923 46 0 0 chr10 28371973 28372081 -117217207 + AluY SINE Alu 194 301 -10 21 0 0 0 chr10 28372127 28372148 -117217140 + AT_rich Low_complexity Low_complexity 1 21 0 2277 77 3 39 chr10 28372356 28372668 -117216620 - AluY SINE Alu -10 301 1 264 122 0 0 chr10 28373272 28373313 -117215975 + (GAAAA)n Simple_repeat Simple_repeat 3 43 0 1255 149 107 9 chr10 28373784 28373999 -117215289 + MER46A DNA MER2_type 1 236 0 428 296 142 21 chr10 28374205 28374438 -117214850 + MIR SINE MIR 1 261 -1 2477 92 0 0 chr10 28374515 28374821 -117214467 + AluSx SINE Alu 1 306 -6 1897 140 49 0 chr10 28374831 28375117 -117214171 + AluSx SINE Alu 1 300 -12 236 391 0 9 chr10 28375145 28375255 -117214033 + MIR SINE MIR 28 136 -126 261 0 0 0 chr10 28375260 28375289 -117213999 + (A)n Simple_repeat Simple_repeat 1 29 0 23 0 0 0 chr10 28375543 28375566 -117213722 + AT_rich Low_complexity Low_complexity 1 23 0 2381 102 0 3 chr10 28375864 28376177 -117213111 + AluSx SINE Alu 1 312 0 1834 164 0 10 chr10 28376185 28376489 -117212799 + AluJb SINE Alu 1 301 -11 980 136 13 13 chr10 28376549 28376704 -117212584 + AluJb SINE Alu 157 311 -1 285 29 0 0 chr10 28377356 28377390 -117211898 + (A)n Simple_repeat Simple_repeat 1 34 0 180 0 0 0 chr10 28378992 28379012 -117210276 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 216 143 0 0 chr10 28379426 28379468 -117209820 + (TTGGGG)n Simple_repeat Simple_repeat 3 44 0 350 270 63 27 chr10 28380342 28380453 -117208835 - L2 LINE L2 0 3272 3158 1413 189 14 11 chr10 28380590 28380870 -117208418 - AluJo SINE Alu -27 285 5 282 269 10 58 chr10 28381618 28381722 -117207566 - MIR SINE MIR -79 183 85 2111 159 40 38 chr10 28381755 28381952 -117207336 + MSTA LTR MaLR 1 196 -232 1552 166 0 111 chr10 28381952 28382284 -117207004 + AluJb SINE Alu 2 296 -6 2111 159 40 38 chr10 28382284 28382513 -117206775 + MSTA LTR MaLR 196 428 0 696 189 6 11 chr10 28382612 28382792 -117206496 + GA-rich Low_complexity Low_complexity 2 180 0 478 156 25 54 chr10 28382796 28382945 -117206343 + L1ME1 LINE L1 5188 5332 -840 737 143 71 0 chr10 28382945 28383057 -117206231 + AluJb SINE Alu 2 121 -191 1018 225 21 55 chr10 28383073 28383088 -117206200 + L1ME1 LINE L1 5877 5891 -275 1699 146 78 20 chr10 28383088 28383383 -117205905 + AluSx SINE Alu 1 312 0 2208 113 3 7 chr10 28383384 28383693 -117205595 + AluSp SINE Alu 6 313 0 1018 225 21 55 chr10 28383693 28383930 -117205358 + L1ME1 LINE L1 5891 6122 -44 2264 108 0 0 chr10 28383930 28384227 -117205061 + AluSx SINE Alu 2 298 -14 1018 225 21 55 chr10 28384227 28384260 -117205028 + L1ME1 LINE L1 6122 6155 -11 671 206 63 0 chr10 28384281 28384407 -117204881 + FRAM SINE Alu 29 162 -14 2463 87 3 0 chr10 28384569 28384879 -117204409 + AluSq SINE Alu 1 311 -2 1813 169 140 3 chr10 28385612 28385955 -117203333 - MLT1B LTR MaLR 0 390 1 2222 125 0 3 chr10 28386016 28386329 -117202959 - AluSx SINE Alu 0 312 1 2239 119 0 3 chr10 28386336 28386647 -117202641 - AluSg SINE Alu 0 310 1 274 203 17 17 chr10 28386899 28386958 -117202330 + LTR33A LTR ERVL 457 515 -8 535 174 41 0 chr10 28386991 28387089 -117202199 + U13 snRNA snRNA 1 102 -2 802 184 14 0 chr10 28387113 28387254 -117202034 + FAM SINE Alu 23 165 -20 23 0 0 0 chr10 28387351 28387374 -117201914 + AT_rich Low_complexity Low_complexity 1 23 0 2152 115 3 0 chr10 28387674 28387978 -117201310 - AluSg SINE Alu -4 306 2 392 167 0 0 chr10 28387995 28388067 -117201221 + CT-rich Low_complexity Low_complexity 3 74 0 216 0 0 0 chr10 28388869 28388893 -117200395 + (CA)n Simple_repeat Simple_repeat 2 25 0 256 313 31 31 chr10 28388893 28389047 -117200241 + L1ME4a LINE L1 5631 5787 -334 2329 92 3 3 chr10 28389047 28389352 -117199936 + AluSx SINE Alu 1 305 -7 256 313 31 31 chr10 28389352 28389389 -117199899 + L1ME4a LINE L1 5786 5822 -299 1332 157 22 54 chr10 28389391 28389648 -117199640 + L1M1 LINE L1 5101 5354 -828 423 0 0 0 chr10 28389648 28389695 -117199593 + (CA)n Simple_repeat Simple_repeat 2 48 0 1332 157 22 54 chr10 28389695 28389779 -117199509 + L1M1 LINE L1 5354 5439 -743 1153 73 0 0 chr10 28389784 28389920 -117199368 + AluSq/x SINE Alu 1 136 -177 2018 125 48 0 chr10 28389920 28390215 -117199073 + AluSx SINE Alu 1 309 -3 1083 144 0 6 chr10 28390216 28390390 -117198898 + L1M1 LINE L1 5432 5604 -696 1833 183 0 3 chr10 28390392 28390693 -117198595 + AluJo SINE Alu 1 300 -12 189 0 0 0 chr10 28390716 28390737 -117198551 + (CA)n Simple_repeat Simple_repeat 2 22 0 248 193 72 24 chr10 28390743 28390826 -117198462 + L1ME4a LINE L1 5974 6060 -61 1722 134 94 11 chr10 28390878 28391153 -117198135 - AluJo SINE Alu -14 298 1 2367 106 0 0 chr10 28391202 28391513 -117197775 - AluSx SINE Alu -1 311 1 545 212 94 41 chr10 28391800 28391970 -117197318 + MLT1L LTR MaLR 433 611 -4 1450 221 27 22 chr10 28392228 28392599 -117196689 - MLT1B LTR MaLR -6 384 12 1903 164 3 13 chr10 28392704 28393016 -117196272 - AluSx SINE Alu -3 309 1 2188 113 3 0 chr10 28393130 28393422 -117195866 - AluSg SINE Alu -17 293 1 364 357 33 19 chr10 28393611 28393821 -117195467 - L2 LINE L2 -489 2825 2613 296 259 170 0 chr10 28393888 28394000 -117195288 - MIR SINE MIR -130 132 2 1962 160 3 0 chr10 28394315 28394621 -117194667 + AluJb SINE Alu 1 307 -5 1391 185 0 115 chr10 28394770 28395110 -117194178 + AluJo SINE Alu 2 302 0 2153 165 131 0 chr10 28395184 28395566 -117193722 + MSTB1 LTR MaLR 1 432 0 28 0 0 0 chr10 28395855 28395883 -117193405 + AT_rich Low_complexity Low_complexity 1 28 0 992 221 46 14 chr10 28396068 28396285 -117193003 + MER58A DNA MER1_type 1 224 0 256 224 0 0 chr10 28396294 28396343 -117192945 + MER5B DNA MER1_type 2 50 -128 4663 184 26 38 chr10 28396381 28397590 -117191698 - L1MA9 LINE L1 -30 6282 5089 300 229 0 144 chr10 28397593 28397711 -117191577 - MER5B DNA MER1_type -11 167 67 1543 96 10 0 chr10 28397865 28398064 -117191224 + AluSc SINE Alu 1 201 -108 1762 110 8 8 chr10 28398170 28398424 -117190864 + AluSx SINE Alu 56 309 -3 207 0 0 0 chr10 28398436 28398459 -117190829 + (TA)n Simple_repeat Simple_repeat 2 24 0 2183 118 0 0 chr10 28400304 28400592 -117188696 + AluSq SINE Alu 1 288 -25 1122 136 0 11 chr10 28400804 28400980 -117188308 + AluSq SINE Alu 1 174 -139 668 224 8 8 chr10 28401291 28401425 -117187863 - FLAM_A SINE Alu -1 141 8 1137 166 42 0 chr10 28401445 28401666 -117187622 - AluJo SINE Alu 0 309 81 1547 253 85 40 chr10 28401666 28402184 -117187104 - L1M4 LINE L1 -5988 554 14 1765 187 0 0 chr10 28402208 28402507 -117186781 - AluJo SINE Alu -8 304 6 180 330 27 71 chr10 28402523 28402635 -117186653 + MIR SINE MIR 53 159 -103 2064 109 3 0 chr10 28402663 28403000 -117186288 + AluSx SINE Alu 1 338 0 867 164 8 0 chr10 28403024 28403152 -117186136 + FLAM_C SINE Alu 1 129 -4 1634 106 0 5 chr10 28403193 28403410 -117185878 - AluSg/x SINE Alu -23 287 72 1568 200 0 7 chr10 28403573 28403868 -117185420 - AluJo SINE Alu -16 296 4 207 0 0 0 chr10 28403890 28403913 -117185375 + (TC)n Simple_repeat Simple_repeat 2 24 0 2025 79 41 38 chr10 28403913 28404203 -117185085 - AluY SINE Alu -13 298 8 24 0 0 0 chr10 28404542 28404566 -117184722 + AT_rich Low_complexity Low_complexity 1 24 0 1926 126 4 0 chr10 28404912 28405226 -117184062 + AluSc SINE Alu 1 315 0 1613 179 0 10 chr10 28405718 28406014 -117183274 + AluSx SINE Alu 1 293 -19 835 198 32 0 chr10 28406022 28406179 -117183109 + L1PB1 LINE L1 5988 6149 -2 1105 152 0 0 chr10 28406658 28406823 -117182465 + AluJb SINE Alu 144 308 -4 3710 202 34 37 chr10 28406823 28407764 -117181524 + L1M4 LINE L1 4325 5262 -884 937 154 0 19 chr10 28407764 28407778 -117181510 + AluSg/x SINE Alu 120 133 -177 2077 128 3 3 chr10 28407778 28408083 -117181205 + AluSx SINE Alu 1 305 -7 937 154 0 19 chr10 28408083 28408224 -117181064 + AluSg/x SINE Alu 133 272 -38 1086 182 28 0 chr10 28408369 28408387 -117180901 + L1M4 LINE L1 5278 5294 -890 2281 106 0 0 chr10 28408387 28408698 -117180590 + AluY SINE Alu 1 311 0 1086 182 28 0 chr10 28408698 28408918 -117180370 + L1M4 LINE L1 5294 5517 -667 526 215 42 103 chr10 28408937 28409108 -117180180 + MER3 DNA MER1_type 4 161 -48 2276 107 13 0 chr10 28409108 28409416 -117179872 + AluSx SINE Alu 1 312 0 526 215 42 103 chr10 28409416 28409458 -117179830 + MER3 DNA MER1_type 161 204 -5 1951 137 0 51 chr10 28409833 28409960 -117179328 + AluJo SINE Alu 1 133 -179 2282 112 0 0 chr10 28409960 28410256 -117179032 - AluSx SINE Alu -16 296 1 1951 137 0 51 chr10 28410256 28410442 -117178846 + AluJo SINE Alu 133 298 -14 2093 120 30 0 chr10 28410995 28411296 -117177992 - AluSx SINE Alu -2 310 1 180 77 0 0 chr10 28411627 28411653 -117177635 + (A)n Simple_repeat Simple_repeat 1 26 0 473 331 102 0 chr10 28411736 28411893 -117177395 - MER91A DNA MER1_type -23 173 1 1430 185 56 14 chr10 28412094 28412381 -117176907 + AluJo SINE Alu 1 299 -13 308 89 0 0 chr10 28412381 28412426 -117176862 + (GGA)n Simple_repeat Simple_repeat 1 45 0 345 157 13 50 chr10 28412486 28412645 -117176643 + T-rich Low_complexity Low_complexity 6 158 0 24 91 0 0 chr10 28412656 28412722 -117176566 + AT_rich Low_complexity Low_complexity 1 66 0 34 98 0 0 chr10 28412745 28412837 -117176451 + AT_rich Low_complexity Low_complexity 1 92 0 1120 198 39 4 chr10 28413130 28413387 -117175901 + L1MC3 LINE L1 7513 7778 -7 21 0 0 0 chr10 28413398 28413419 -117175869 + AT_rich Low_complexity Low_complexity 1 21 0 216 162 0 0 chr10 28414064 28414101 -117175187 + GA-rich Low_complexity Low_complexity 2 38 0 2556 53 3 0 chr10 28414904 28415208 -117174080 - AluY SINE Alu -6 305 1 1606 175 54 0 chr10 28415994 28416274 -117173014 + AluJo SINE Alu 1 295 -17 1118 302 40 30 chr10 28417198 28417695 -117171593 - MLT1J LTR MaLR -9 502 1 2412 88 0 3 chr10 28417899 28418207 -117171081 + AluSq SINE Alu 1 307 -6 209 213 0 0 chr10 28418515 28418562 -117170726 + (TA)n Simple_repeat Simple_repeat 1 47 0 212 264 34 20 chr10 28418690 28418838 -117170450 + (TA)n Simple_repeat Simple_repeat 1 150 0 389 190 13 0 chr10 28418965 28419044 -117170244 + LTR24C LTR ERV1 556 635 0 24 0 0 0 chr10 28419099 28419123 -117170165 + AT_rich Low_complexity Low_complexity 1 24 0 2095 96 13 35 chr10 28419140 28419454 -117169834 + AluSc SINE Alu 3 309 0 2378 57 7 17 chr10 28421267 28421568 -117167720 + AluY SINE Alu 1 298 -13 2219 109 10 10 chr10 28421638 28421950 -117167338 + AluSx SINE Alu 1 312 0 203 191 15 0 chr10 28422077 28422145 -117167143 + (TA)n Simple_repeat Simple_repeat 1 69 0 2550 188 81 14 chr10 28422176 28422730 -117166558 - LTR49 LTR ERV1 0 595 5 360 0 0 0 chr10 28422730 28422770 -117166518 + (TG)n Simple_repeat Simple_repeat 2 41 0 195 162 0 0 chr10 28423653 28423690 -117165598 + (TG)n Simple_repeat Simple_repeat 2 38 0 282 148 0 0 chr10 28423725 28423779 -117165509 + (TG)n Simple_repeat Simple_repeat 1 54 0 22 0 0 0 chr10 28423858 28423880 -117165408 + AT_rich Low_complexity Low_complexity 1 22 0 2883 62 0 0 chr10 28424139 28424480 -117164808 + L1PA7 LINE L1 5801 6141 -13 1487 205 72 11 chr10 28424926 28425287 -117164001 + LTR49 LTR ERV1 211 593 -2 1874 180 43 7 chr10 28425291 28425701 -117163587 + LTR49-int LTR ERV1 1 1327 -4619 2657 180 15 27 chr10 28425736 28426002 -117163286 + LTR49-int LTR ERV1 361 629 -5317 8305 53 2 0 chr10 28426002 28426966 -117162322 + LTR5 LTR ERVK 1 966 -3 2657 180 15 27 chr10 28426966 28427227 -117162061 + LTR49-int LTR ERV1 629 1476 -4470 2664 190 35 8 chr10 28427267 28427777 -117161511 + LTR49-int LTR ERV1 840 1363 -4968 1032 175 62 5 chr10 28427779 28427973 -117161315 - L1PA16 LINE L1 -3 6163 5959 1180 153 37 23 chr10 28428112 28428309 -117160979 + LTR49-int LTR ERV1 1372 1574 -4757 5654 108 26 2 chr10 28428309 28429116 -117160172 + L1MA1 LINE L1 5477 6302 0 1180 153 37 23 chr10 28429116 28429134 -117160154 + LTR49-int LTR ERV1 1574 1590 -4741 2021 128 3 3 chr10 28429420 28429710 -117159578 - AluSg SINE Alu -20 290 1 323 26 0 0 chr10 28431270 28431308 -117157980 - L1PA12 LINE L1 -351 5817 5780 2492 99 0 14 chr10 28431308 28431645 -117157643 + L1PA12 LINE L1 5830 6168 0 2011 71 26 11 chr10 28431797 28432066 -117157222 + AluY SINE Alu 39 311 0 989 224 49 109 chr10 28432378 28432775 -117156513 - MLT1A2 LTR MaLR -3 372 1 349 270 45 9 chr10 28432776 28432887 -117156401 + L1M4 LINE L1 3540 3654 -2492 446 271 32 72 chr10 28432940 28433191 -117156097 + L1M4 LINE L1 4644 4884 -1262 585 292 67 33 chr10 28433257 28433549 -117155739 - L2 LINE L2 -268 3045 2748 1568 104 0 42 chr10 28433749 28433923 -117155365 - L1P LINE L1 -959 5187 5025 1846 93 93 0 chr10 28433923 28434213 -117155075 - AluSg SINE Alu 0 314 1 1568 104 0 42 chr10 28434213 28434297 -117154991 - L1P LINE L1 -1121 5025 4939 6739 84 12 22 chr10 28434297 28434897 -117154391 + L1PA8 LINE L1 5184 5773 -399 2356 91 0 10 chr10 28434897 28435204 -117154084 + AluY SINE Alu 1 304 -7 6739 84 12 22 chr10 28435204 28435592 -117153696 + L1PA8 LINE L1 5773 6163 -9 32 26 0 0 chr10 28435599 28435638 -117153650 + AT_rich Low_complexity Low_complexity 1 39 0 1287 177 55 25 chr10 28436919 28437235 -117152053 + MER33 DNA MER1_type 1 318 -6 1276 149 0 0 chr10 28437717 28437905 -117151383 - AluSx SINE Alu -94 218 31 6339 135 94 23 chr10 28437905 28439649 -117149639 + pTR5 LTR ERV1 743 2295 -143 237 134 6 0 chr10 28439660 28439708 -117149580 - Alu SINE Alu -267 35 1 2273 126 0 0 chr10 28440253 28440563 -117148725 + AluSg SINE Alu 1 310 0 237 250 231 9 chr10 28440933 28441041 -117148247 - MIR SINE MIR -117 145 14 22 35 0 0 chr10 28442091 28442120 -117147168 + AT_rich Low_complexity Low_complexity 1 29 0 2488 75 0 3 chr10 28443124 28443431 -117145857 - AluY SINE Alu -5 306 1 330 161 145 65 chr10 28443614 28443738 -117145550 + MIR SINE MIR 95 228 -34 1193 226 73 35 chr10 28443744 28444058 -117145230 + MER31-int LTR ERV1 638 963 -3973 229 156 44 0 chr10 28444121 28444166 -117145122 + (CATATA)n Simple_repeat Simple_repeat 2 48 0 324 221 160 55 chr10 28444197 28444378 -117144910 + MER31-int LTR ERV1 1141 1340 -3596 1574 159 51 14 chr10 28444379 28444675 -117144613 + MER67A LTR ERV1 156 462 -81 182 266 202 9 chr10 28444772 28444881 -117144407 - L2 LINE L2 -1371 1943 1814 22 35 0 0 chr10 28445494 28445523 -117143765 + AT_rich Low_complexity Low_complexity 1 29 0 1668 97 0 0 chr10 28445935 28446151 -117143137 + AluSc SINE Alu 74 289 -20 2436 58 0 16 chr10 28446151 28446460 -117142828 + AluY SINE Alu 1 304 -7 2365 77 3 7 chr10 28446616 28446916 -117142372 - AluY SINE Alu -11 300 2 2133 114 0 7 chr10 28447150 28447458 -117141830 + AluSx SINE Alu 1 306 -6 22 35 0 0 chr10 28447979 28448008 -117141280 + AT_rich Low_complexity Low_complexity 1 29 0 2200 89 0 67 chr10 28448133 28448460 -117140828 + AluY SINE Alu 1 305 -6 2310 97 3 13 chr10 28448604 28448913 -117140375 - AluSc SINE Alu -3 306 1 2271 91 0 7 chr10 28448916 28449214 -117140074 - AluSg1 SINE Alu -13 296 1 23 0 0 0 chr10 28449699 28449722 -117139566 + AT_rich Low_complexity Low_complexity 1 23 0 2242 93 7 32 chr10 28449897 28450207 -117139081 - AluSp SINE Alu -11 302 1 1889 184 3 7 chr10 28450322 28450632 -117138656 - AluJb SINE Alu -3 309 1 215 368 61 0 chr10 28451997 28452111 -117137177 + MIR SINE MIR 80 200 -62 183 120 0 0 chr10 28452278 28452303 -117136985 - MIR SINE MIR -68 140 116 209 356 35 17 chr10 28454095 28454210 -117135078 - MIR SINE MIR -122 140 24 744 200 0 0 chr10 28454634 28454759 -117134529 + AluJb SINE Alu 2 126 -186 204 300 17 42 chr10 28456460 28456580 -117132708 - MIR SINE MIR -12 250 134 * 394 284 165 17 chr10 28456555 28456731 -117132557 - MIR SINE MIR -37 225 24 336 24 0 0 chr10 28457012 28457053 -117132235 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 1349 188 12 0 chr10 28459217 28459462 -117129826 - AluSx SINE Alu -29 283 36 2193 89 0 24 chr10 28459968 28460259 -117129029 + AluSq SINE Alu 7 290 -23 6829 68 2 5 chr10 28460446 28461325 -117127963 + L1PA8A LINE L1 5254 6130 -1 753 264 77 110 chr10 28462109 28462826 -117126462 + L2 LINE L2 2109 2801 -513 259 313 17 73 chr10 28462963 28463142 -117126146 + L2 LINE L2 2948 3116 -156 2040 93 42 39 chr10 28464514 28464824 -117124464 - AluSx SINE Alu -1 311 1 2307 127 41 120 chr10 28464905 28465370 -117123918 + MSTA LTR MaLR 1 428 0 1925 143 14 0 chr10 28465806 28466092 -117123196 + AluSq SINE Alu 1 290 -23 2343 105 0 3 chr10 28466095 28466401 -117122887 + AluSx SINE Alu 1 305 -7 223 154 15 31 chr10 28466611 28466676 -117122612 + (CAAA)n Simple_repeat Simple_repeat 1 64 0 859 134 10 139 chr10 28466725 28466926 -117122362 - MER2 DNA MER2_type -170 175 1 237 239 60 0 chr10 28467024 28467091 -117122197 + MER5A DNA MER1_type 31 101 -88 766 245 5 22 chr10 28467416 28467600 -117121688 + MIR SINE MIR 58 238 -24 249 333 30 85 chr10 28467681 28467754 -117121534 + L2 LINE L2 2842 2918 -354 1740 142 0 111 chr10 28467754 28467949 -117121339 - AluJo SINE Alu -6 306 164 2141 92 18 0 chr10 28467949 28468230 -117121058 - AluSq SINE Alu -27 286 1 1740 142 0 111 chr10 28468230 28468378 -117120910 - AluJo SINE Alu -148 164 1 249 333 30 85 chr10 28468378 28468574 -117120714 + L2 LINE L2 2918 3096 -176 409 111 0 0 chr10 28468717 28468771 -117120517 - Alu SINE Alu -254 55 2 180 0 26 79 chr10 28468984 28469022 -117120266 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 240 240 67 0 chr10 28469923 28469998 -117119290 - LTR40b LTR ERVL 0 462 383 345 305 49 59 chr10 28470002 28470205 -117119083 + LTR40a LTR ERVL 209 409 -110 283 310 0 0 chr10 28470203 28470261 -117119027 - LTR40a LTR ERVL -222 297 240 * 345 234 143 0 chr10 28470341 28470418 -117118870 - LTR40b LTR ERVL -293 169 82 2403 91 0 0 chr10 28470426 28470724 -117118564 + AluSx SINE Alu 1 298 -14 1855 165 0 10 chr10 28470734 28471025 -117118263 + AluSx SINE Alu 1 288 -24 21 0 0 0 chr10 28471025 28471046 -117118242 + AT_rich Low_complexity Low_complexity 1 21 0 975 67 8 0 chr10 28471279 28471398 -117117890 + AluY SINE Alu 9 128 -183 1766 199 67 3 chr10 28471398 28471789 -117117499 - Tigger6a DNA MER2_type -630 453 38 934 188 74 0 chr10 28472172 28472348 -117116940 + MER74A LTR ERVL 1 189 -369 1388 226 13 7 chr10 28472387 28472688 -117116600 + MER74A LTR ERVL 179 481 -77 287 318 45 23 chr10 28472955 28473087 -117116201 - MIR SINE MIR -114 148 14 2105 119 3 3 chr10 28473427 28473720 -117115568 + AluSg SINE Alu 1 293 -17 2186 107 0 20 chr10 28474522 28474822 -117114466 + AluSx SINE Alu 1 294 -18 2374 105 20 80 chr10 28475611 28476010 -117113278 + THE1C LTR MaLR 1 375 0 679 247 101 31 chr10 28476124 28476351 -117112937 + MIR SINE MIR 20 262 0 1912 158 7 3 chr10 28476441 28476738 -117112550 + AluJo SINE Alu 1 298 -14 494 222 0 9 chr10 28476752 28476860 -117112428 + MER104 DNA Tc2 3 109 -71 3603 241 48 34 chr10 28477086 28477106 -117112182 - L1 LINE L1 -2917 3229 3211 2427 98 0 6 chr10 28477106 28477421 -117111867 + AluSq SINE Alu 1 313 0 3603 241 48 34 chr10 28477421 28478824 -117110464 - L1 LINE L1 -2935 3211 1750 5137 160 62 30 chr10 28478852 28478977 -117110311 - L1PBb LINE L1 -4759 1445 1325 1937 125 24 20 chr10 28478977 28479272 -117110016 - AluSx SINE Alu -16 296 1 5137 160 62 30 chr10 28479272 28480548 -117108740 - L1PBb LINE L1 -4879 1325 1 2754 298 47 36 chr10 28480529 28482132 -117107156 - L1PBa LINE L1 -5240 1623 3 * 769 210 14 0 chr10 28482324 28482467 -117106821 - AluSq/x SINE Alu -167 145 1 341 217 0 0 chr10 28482590 28482650 -117106638 + MLT1H1 LTR MaLR 1 60 -495 878 204 66 15 chr10 28482653 28482849 -117106439 + AluJo SINE Alu 89 294 -18 1371 246 102 44 chr10 28482850 28483330 -117105958 + MLT1H1 LTR MaLR 48 555 0 2263 105 0 0 chr10 28483625 28483919 -117105369 + AluSc SINE Alu 1 294 -15 23 54 0 0 chr10 28484008 28484045 -117105243 + AT_rich Low_complexity Low_complexity 1 37 0 433 272 14 48 chr10 28484099 28484246 -117105042 + MIR SINE MIR 5 146 -116 836 182 8 0 chr10 28484252 28484384 -117104904 + AluJo SINE Alu 2 134 -178 393 254 51 8 chr10 28484389 28484507 -117104781 + MIR SINE MIR 136 258 -4 202 298 0 0 chr10 28484529 28484576 -117104712 + MIR SINE MIR 13 59 -203 345 278 41 0 chr10 28484780 28484877 -117104411 + L3 LINE CR1 1460 1560 -17 1291 132 0 0 chr10 28485280 28485462 -117103826 - AluJ SINE Alu -2 310 129 1685 179 0 13 chr10 28485470 28485771 -117103517 - AluJo SINE Alu -15 297 1 775 169 0 8 chr10 28485820 28485938 -117103350 - AluJ SINE Alu -192 120 4 1590 215 129 22 chr10 28486526 28487014 -117102274 - L1ME3A LINE L1 0 6170 5631 319 200 56 11 chr10 28487882 28487972 -117101316 - L1MC4 LINE L1 -6 8036 7943 1429 175 57 0 chr10 28487987 28488233 -117101055 - AluJb SINE Alu -52 260 1 403 196 125 107 chr10 28488251 28488419 -117100869 - L1MC4 LINE L1 -105 7937 7767 650 151 0 0 chr10 28488419 28488512 -117100776 + AluSx SINE Alu 3 95 -218 1638 99 14 5 chr10 28488529 28488752 -117100536 + AluSx SINE Alu 74 298 -14 632 187 33 169 chr10 28488753 28489084 -117100204 - L1MC4 LINE L1 -267 7775 7490 * 676 216 75 37 chr10 28489083 28489324 -117099964 - L1ME4a LINE L1 -295 5826 5577 427 250 35 81 chr10 28489424 28489596 -117099692 + L1MC4a LINE L1 7294 7457 -351 621 280 94 37 chr10 28489987 28490390 -117098898 - L1MC4 LINE L1 -4 8038 7613 27 29 0 0 chr10 28490598 28490632 -117098656 + AT_rich Low_complexity Low_complexity 1 34 0 859 153 0 0 chr10 28492223 28492354 -117096934 + AluJo SINE Alu 1 131 -181 1965 137 39 0 chr10 28492360 28492645 -117096643 + AluSx SINE Alu 3 298 -14 907 220 23 0 chr10 28492690 28492867 -117096421 + AluJo SINE Alu 118 298 -14 1428 162 165 13 chr10 28493032 28493335 -117095953 + L1MB7 LINE L1 5823 6171 -13 2223 118 0 3 chr10 28494560 28494865 -117094423 - AluSq SINE Alu -7 306 3 1608 179 24 30 chr10 28495804 28496101 -117093187 + AluJo SINE Alu 1 295 -17 569 230 0 0 chr10 28496119 28496219 -117093069 + FRAM SINE Alu 1 100 -76 1134 194 158 26 chr10 28496278 28496582 -117092706 + MER2 DNA MER2_type 1 344 0 2121 106 0 0 chr10 28496834 28497108 -117092180 - AluSx SINE Alu -38 274 1 870 157 0 15 chr10 28497514 28497648 -117091640 - FLAM_C SINE Alu -1 132 1 216 196 0 0 chr10 28497650 28497696 -117091592 + T-rich Low_complexity Low_complexity 2 47 0 2140 126 10 0 chr10 28497698 28498007 -117091281 - AluSp SINE Alu -1 312 1 1798 148 38 14 chr10 28498779 28499070 -117090218 + AluJb SINE Alu 1 298 -14 1223 112 0 0 chr10 28499120 28499290 -117089998 - AluSg/x SINE Alu -9 303 134 2142 119 3 0 chr10 28499346 28499648 -117089640 - AluSx SINE Alu -9 303 1 893 102 14 54 chr10 28500157 28500304 -117088984 + L1PB3 LINE L1 6011 6151 -3 24 32 0 0 chr10 28500306 28500337 -117088951 + AT_rich Low_complexity Low_complexity 1 31 0 570 113 38 0 chr10 28500426 28500506 -117088782 - AluSg/x SINE Alu -13 297 215 684 175 114 0 chr10 28500558 28500672 -117088616 - FLAM_A SINE Alu -6 127 1 2454 93 0 3 chr10 28500692 28501005 -117088283 - AluSq SINE Alu -1 312 1 2096 145 7 0 chr10 28501144 28501454 -117087834 - AluJb SINE Alu 0 312 1 1140 161 55 5 chr10 28501477 28501676 -117087612 + AluJb SINE Alu 83 291 -21 442 318 112 40 chr10 28501684 28502058 -117087230 - L2 LINE L2 -2659 655 255 1969 116 3 27 chr10 28502905 28503037 -117086251 + AluSx SINE Alu 6 140 -172 2144 116 0 28 chr10 28503037 28503357 -117085931 + AluSx SINE Alu 1 311 -1 1969 116 3 27 chr10 28503357 28503517 -117085771 + AluSx SINE Alu 140 291 -21 417 239 28 0 chr10 28504034 28504143 -117085145 - L1MC4 LINE L1 -5 8037 7926 490 152 168 0 chr10 28504237 28504362 -117084926 - L1ME1 LINE L1 -5 6161 6016 1225 184 88 33 chr10 28504373 28504704 -117084584 - L1ME1 LINE L1 -582 5602 5254 2400 56 10 13 chr10 28504722 28505025 -117084263 - AluY SINE Alu -9 302 1 2431 70 0 16 chr10 28505035 28505349 -117083939 - AluY SINE Alu -2 309 1 438 221 49 8 chr10 28505349 28505530 -117083758 - L1M4 LINE L1 -3931 2755 2525 1788 171 7 0 chr10 28505539 28505868 -117083420 + AluSx SINE Alu 1 331 0 1089 228 134 55 chr10 28505909 28506691 -117082597 - L1M4 LINE L1 -4706 1940 1107 2080 134 3 7 chr10 28507043 28507350 -117081938 - AluSx SINE Alu -6 306 1 607 149 30 0 chr10 28507467 28507635 -117081653 + (TA)n Simple_repeat Simple_repeat 1 173 0 1530 130 130 16 chr10 28508307 28508560 -117080728 - AluSg SINE Alu -15 295 14 306 250 176 27 chr10 28508728 28508957 -117080331 - LTR41 LTR ERVL 0 795 510 2377 88 3 0 chr10 28509560 28509854 -117079434 - AluSg SINE Alu -15 295 1 857 174 12 124 chr10 28509885 28509972 -117079316 - AluJo SINE Alu -92 220 125 2235 118 0 7 chr10 28509972 28510276 -117079012 - AluSx SINE Alu -8 304 3 2195 92 6 47 chr10 28510286 28510603 -117078685 - AluSx SINE Alu -7 305 2 857 174 12 124 chr10 28510603 28510746 -117078542 - AluJo SINE Alu -197 115 6 326 156 32 50 chr10 28510757 28510837 -117078451 + LTR41 LTR ERVL 440 771 0 21 0 0 0 chr10 28510918 28510939 -117078349 + AT_rich Low_complexity Low_complexity 1 21 0 886 149 0 0 chr10 28510941 28511062 -117078226 - FLAM_C SINE Alu -12 121 1 181 299 0 30 chr10 28511219 28511286 -117078002 + L2 LINE L2 3201 3265 -7 2430 56 3 17 chr10 28511554 28511856 -117077432 + AluY SINE Alu 1 298 -13 1595 118 77 37 chr10 28512357 28512629 -117076659 - AluSx SINE Alu -1 311 29 2046 126 7 13 chr10 28512974 28513283 -117076005 + AluJb SINE Alu 1 307 -5 1343 140 212 8 chr10 28514714 28514964 -117074324 + AluJo SINE Alu 2 302 0 2351 110 0 0 chr10 28515103 28515411 -117073877 + AluSq SINE Alu 1 308 -5 2513 37 0 3 chr10 28515545 28515841 -117073447 + AluY SINE Alu 1 295 -16 885 111 8 8 chr10 28516083 28516209 -117073079 + FLAM_C SINE Alu 1 126 -17 200 217 0 0 chr10 28516241 28516287 -117073001 + A-rich Low_complexity Low_complexity 1 46 0 1761 163 3 14 chr10 28516441 28516757 -117072531 + AluSx SINE Alu 1 313 0 1799 102 81 35 chr10 28516916 28517200 -117072088 - AluY SINE Alu -14 297 1 2106 126 0 0 chr10 28517200 28517486 -117071802 - AluSx SINE Alu -18 294 9 2204 123 0 7 chr10 28517602 28517912 -117071376 - AluSx SINE Alu -4 308 1 1967 155 3 3 chr10 28518711 28519008 -117070280 - AluSx SINE Alu -15 297 1 445 222 0 9 chr10 28519255 28519363 -117069925 - MER104 DNA Tc2 -71 109 3 1949 155 7 3 chr10 28519377 28519674 -117069614 - AluJo SINE Alu -14 298 1 692 247 101 31 chr10 28519764 28519991 -117069297 - MIR SINE MIR 0 262 20 2281 95 20 80 chr10 28520105 28520504 -117068784 - THE1C LTR MaLR 0 375 1 2186 107 0 20 chr10 28521293 28521593 -117067695 - AluSx SINE Alu -18 294 1 2203 109 3 3 chr10 28522395 28522688 -117066600 - AluSg SINE Alu -17 293 1 376 306 106 15 chr10 28523028 28523227 -117066061 + MIR SINE MIR 14 230 -32 1763 174 7 0 chr10 28523265 28523580 -117065708 - AluJb SINE Alu 0 317 1 706 120 19 0 chr10 28523976 28524084 -117065204 - AluSx SINE Alu -5 304 195 1100 113 0 0 chr10 28524089 28524230 -117065058 - AluSx SINE Alu -171 141 1 1796 190 7 3 chr10 28524579 28524884 -117064404 - AluJo SINE Alu -6 306 1 739 132 0 0 chr10 28525966 28526072 -117063216 + U6 snRNA snRNA 1 106 -1 1794 157 10 17 chr10 28526308 28526601 -117062687 + AluJo SINE Alu 1 291 -21 289 336 74 7 chr10 28527040 28527189 -117062099 - MIR SINE MIR -47 215 57 2384 107 0 7 chr10 28527322 28527632 -117061656 + AluSg SINE Alu 1 308 -2 21 0 0 0 chr10 28528209 28528230 -117061058 + AT_rich Low_complexity Low_complexity 1 21 0 2170 157 33 28 chr10 28528260 28528688 -117060600 - Tigger2a DNA MER2_type 0 434 5 2536 69 0 0 chr10 28528995 28529298 -117059990 + AluSg SINE Alu 1 303 -7 204 280 0 0 chr10 28529357 28529407 -117059881 - MER91 DNA MER1_type -62 128 79 2197 118 0 13 chr10 28529503 28529808 -117059480 - AluSq SINE Alu -12 301 1 2205 105 6 16 chr10 28530147 28530461 -117058827 - AluSp SINE Alu -2 311 1 651 275 7 0 chr10 28530480 28530629 -117058659 - MER58A DNA MER1_type 0 151 2 821 144 0 8 chr10 28530802 28530952 -117058336 - FLAM_C SINE Alu 0 149 1 197 240 82 111 chr10 28531213 28531384 -117057904 - L2 LINE L2 -787 2527 2362 21 0 0 0 chr10 28531605 28531626 -117057662 + AT_rich Low_complexity Low_complexity 1 21 0 348 321 124 19 chr10 28531646 28531855 -117057433 - MIR SINE MIR -16 246 16 307 116 13 247 chr10 28532254 28532358 -117056930 - L1P5 LINE L1 -279 5875 5819 2257 89 3 0 chr10 28532358 28532649 -117056639 + AluY SINE Alu 1 292 -19 307 116 13 247 chr10 28532649 28532702 -117056586 - L1P5 LINE L1 -335 5819 5755 1917 157 0 4 chr10 28534205 28534518 -117054770 - AluSg SINE Alu 0 312 1 2096 130 3 0 chr10 28534520 28534819 -117054469 - AluSx SINE Alu -9 303 4 6385 216 55 24 chr10 28537121 28537831 -117051457 - L1 LINE L1 -2234 3912 3226 2424 96 0 6 chr10 28537831 28538144 -117051144 + AluSq SINE Alu 3 313 0 6385 216 55 24 chr10 28538144 28539547 -117049741 - L1 LINE L1 -2920 3226 1750 4767 161 60 30 chr10 28539575 28539700 -117049588 - L1PBb LINE L1 -4759 1445 1325 1926 153 24 0 chr10 28539700 28539995 -117049293 - AluSx SINE Alu -10 302 1 4767 161 60 30 chr10 28539995 28541272 -117048016 - L1PBb LINE L1 -4879 1325 1 2297 311 37 27 chr10 28541253 28542857 -117046431 - L1PBa LINE L1 -5240 1623 3 * 2552 41 0 29 chr10 28542920 28543234 -117046054 + AluY SINE Alu 1 305 -6 2283 108 0 3 chr10 28543429 28543724 -117045564 + AluSg SINE Alu 1 294 -16 1980 152 17 0 chr10 28543974 28544271 -117045017 - AluSx SINE Alu -10 302 1 1549 194 60 0 chr10 28544271 28544554 -117044734 - AluJo SINE Alu -8 304 5 754 173 0 0 chr10 28544785 28544912 -117044376 + FLAM_C SINE Alu 1 127 -6 2147 125 0 10 chr10 28545171 28545476 -117043812 - AluSg SINE Alu -2 308 7 1870 131 60 35 chr10 28545927 28546293 -117042995 - THE1C LTR MaLR 0 375 1 2159 146 33 5 chr10 28546570 28546961 -117042327 + MSTA LTR MaLR 1 402 -26 263 125 0 0 chr10 28546994 28547034 -117042254 + MSTA LTR MaLR 389 428 0 2266 95 3 0 chr10 28547298 28547583 -117041705 + AluSx SINE Alu 12 297 -15 23 33 0 0 chr10 28547619 28547649 -117041639 + AT_rich Low_complexity Low_complexity 1 30 0 2255 98 13 3 chr10 28548233 28548538 -117040750 + AluSc SINE Alu 1 308 -1 186 71 0 0 chr10 28548640 28548668 -117040620 + (T)n Simple_repeat Simple_repeat 1 28 0 395 263 169 78 chr10 28549041 28549361 -117039927 - L2 LINE L2 -18 3295 2947 228 167 24 0 chr10 28549917 28549959 -117039329 - MER57A LTR ERV1 -66 337 295 2358 103 3 6 chr10 28550774 28551086 -117038202 + AluSx SINE Alu 1 311 -1 2277 107 33 0 chr10 28551336 28551635 -117037653 + AluSx SINE Alu 1 309 -3 486 198 72 54 chr10 28551868 28552011 -117037277 - MER5A DNA MER1_type -40 149 4 1660 137 27 34 chr10 28552542 28552834 -117036454 + AluJb SINE Alu 11 300 -12 2232 101 0 17 chr10 28554178 28554476 -117034812 - AluSx SINE Alu -19 293 1 2038 111 56 0 chr10 28554476 28554763 -117034525 - AluSx SINE Alu -6 306 3 238 268 0 0 chr10 28554810 28554866 -117034422 - Charlie1 DNA MER1_type 0 2761 2706 359 286 103 33 chr10 28554955 28555161 -117034127 - L1ME3A LINE L1 -207 5963 5744 2125 110 0 7 chr10 28555180 28555510 -117033778 + AluY SINE Alu 1 311 0 2166 96 3 7 chr10 28555518 28555811 -117033477 + AluSc SINE Alu 1 292 -17 227 196 0 0 chr10 28555871 28555927 -117033361 - Charlie1 DNA MER1_type -76 2685 2630 376 266 144 6 chr10 28555980 28556153 -117033135 - Charlie1 DNA MER1_type -2562 199 3 2424 94 0 0 chr10 28556428 28556737 -117032551 - AluSc SINE Alu 0 309 1 192 40 0 0 chr10 28556883 28556908 -117032380 + (CA)n Simple_repeat Simple_repeat 2 26 0 2111 139 10 0 chr10 28557593 28557896 -117031392 - AluSq SINE Alu -7 306 1 2272 102 0 0 chr10 28557928 28558221 -117031067 + AluSx SINE Alu 13 305 -7 200 254 42 56 chr10 28558365 28558436 -117030852 - L2 LINE L2 -1056 2258 2189 256 379 52 26 chr10 28559331 28559484 -117029804 + L2 LINE L2 2573 2729 -585 250 282 122 30 chr10 28559663 28559794 -117029494 + L2 LINE L2 2912 3054 -218 1855 131 50 0 chr10 28559807 28560089 -117029199 - AluSx SINE Alu -14 298 3 207 277 0 0 chr10 28560112 28560159 -117029129 + L2 LINE L2 3221 3267 -5 436 171 0 34 chr10 28560803 28560891 -117028397 + AluJ/FRAM SINE Alu 217 301 -11 28 0 0 0 chr10 28560899 28560927 -117028361 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr10 28561075 28561097 -117028191 + AT_rich Low_complexity Low_complexity 1 22 0 225 0 0 0 chr10 28561263 28561288 -117028000 + (TTTTTG)n Simple_repeat Simple_repeat 5 29 0 2454 85 3 0 chr10 28564146 28564453 -117024835 - AluSg SINE Alu -2 308 1 231 133 0 0 chr10 28565472 28565517 -117023771 + (ATG)n Simple_repeat Simple_repeat 1 45 0 701 250 75 48 chr10 28565691 28566023 -117023265 + L1ME LINE L1 5379 5659 -462 2002 111 7 0 chr10 28566352 28566654 -117022634 + AluSx SINE Alu 1 304 0 207 0 0 0 chr10 28566669 28566692 -117022596 + (TAG)n Simple_repeat Simple_repeat 1 23 0 2133 116 7 7 chr10 28566752 28567055 -117022233 - AluSq SINE Alu -10 303 1 25 0 0 0 chr10 28567709 28567734 -117021554 + AT_rich Low_complexity Low_complexity 1 25 0 200 302 0 0 chr10 28567774 28567837 -117021451 + T-rich Low_complexity Low_complexity 1 63 0 421 268 179 37 chr10 28568170 28568416 -117020872 - L2 LINE L2 -1407 1907 1627 2236 126 0 0 chr10 28568951 28569252 -117020036 - AluSx SINE Alu -11 301 1 808 256 18 27 chr10 28569527 28569746 -117019542 + MIR SINE MIR 32 248 -14 27 62 0 0 chr10 28570243 28570291 -117018997 + AT_rich Low_complexity Low_complexity 1 48 0 1879 161 3 10 chr10 28570300 28570605 -117018683 + AluJo SINE Alu 1 303 -9 1682 164 16 131 chr10 28571104 28571424 -117017864 - L1M4 LINE L1 -864 5282 5050 1684 114 40 120 chr10 28571424 28571611 -117017677 - AluSx SINE Alu -13 299 147 2305 97 0 0 chr10 28571611 28571922 -117017366 - AluY SINE Alu 0 311 1 1684 114 40 120 chr10 28571922 28572059 -117017229 - AluSx SINE Alu -165 147 1 1682 164 16 131 chr10 28572059 28572288 -117017000 - L1M4 LINE L1 -1096 5050 4796 714 190 7 0 chr10 28572322 28572459 -117016829 - L1MEc LINE L1 -4274 2122 1985 376 255 69 22 chr10 28572530 28572806 -117016482 - L1MEc LINE L1 -4904 1357 1000 1670 272 83 37 chr10 28572816 28573333 -117015955 - L1MEc LINE L1 -5651 745 190 2311 105 0 3 chr10 28573333 28573646 -117015642 - AluSx SINE Alu 0 312 1 1670 272 83 37 chr10 28573646 28573779 -117015509 - L1MEc LINE L1 -6206 190 65 459 318 62 88 chr10 28573794 28574146 -117015142 + L2 LINE L2 2930 3272 0 501 307 84 13 chr10 28574608 28574917 -117014371 - L1ME4a LINE L1 -283 5838 5508 2335 87 0 7 chr10 28574924 28575222 -117014066 - AluSg SINE Alu -14 296 1 2204 107 0 7 chr10 28575728 28576027 -117013261 - AluSx SINE Alu -15 297 1 29 47 0 0 chr10 28576524 28576567 -117012721 + AT_rich Low_complexity Low_complexity 1 43 0 197 277 0 0 chr10 28576678 28576725 -117012563 + L2 LINE L2 3226 3272 0 219 192 39 64 chr10 28578065 28578143 -117011145 + MIR SINE MIR 176 251 -11 428 279 84 6 chr10 28580442 28580621 -117008667 - L2 LINE L2 -410 2904 2712 26 64 0 0 chr10 28580932 28580979 -117008309 + AT_rich Low_complexity Low_complexity 1 47 0 1639 84 0 50 chr10 28581287 28581525 -117007763 - AluY SINE Alu -6 305 80 2127 124 0 13 chr10 28581554 28581728 -117007560 - AluSx SINE Alu -5 307 137 2300 105 0 3 chr10 28581728 28582041 -117007247 - AluSx SINE Alu 0 312 1 2127 124 0 13 chr10 28582041 28582173 -117007115 - AluSx SINE Alu -175 137 5 21 0 0 0 chr10 28582564 28582585 -117006703 + AT_rich Low_complexity Low_complexity 1 21 0 2561 162 44 25 chr10 28582664 28583182 -117006106 - L1MB8 LINE L1 0 6178 5651 25 31 0 0 chr10 28583604 28583636 -117005652 + AT_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr10 28583666 28583694 -117005594 + AT_rich Low_complexity Low_complexity 1 28 0 693 267 24 34 chr10 28584320 28584526 -117004762 - MIR SINE MIR -24 238 35 758 224 22 22 chr10 28584802 28584985 -117004303 - MER58A DNA MER1_type -4 220 38 2116 124 6 39 chr10 28585600 28585787 -117003501 - MER46B DNA MER2_type -2495 236 190 2427 45 38 3 chr10 28585787 28586079 -117003209 - AluY SINE Alu -9 302 1 2116 124 6 39 chr10 28586079 28586242 -117003046 - MER46B DNA MER2_type -2541 190 23 1449 179 97 24 chr10 28586242 28586571 -117002717 - MER47A DNA MER2_type 0 366 14 335 246 0 0 chr10 28586582 28586651 -117002637 - MER47A DNA MER2_type -297 69 1 584 180 45 0 chr10 28586849 28586960 -117002328 - L1M3 LINE L1 -404 5779 5664 1869 128 75 0 chr10 28587317 28587598 -117001690 + AluSx SINE Alu 2 303 -9 1648 182 7 4 chr10 28588928 28589203 -117000085 + AluJo SINE Alu 5 280 -32 204 40 0 0 chr10 28589203 28589228 -117000060 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 261 0 0 0 chr10 28590385 28590414 -116998874 + (TG)n Simple_repeat Simple_repeat 2 30 0 499 81 0 14 chr10 28590434 28590508 -116998780 + MER34C LTR ERV1 424 496 -89 1903 125 26 42 chr10 28591034 28591346 -116997942 - AluSx SINE Alu -5 307 1 1928 119 16 3 chr10 28591965 28592268 -116997020 - L1PA13 LINE L1 -3 6160 5854 1759 102 27 5 chr10 28592269 28592690 -116996598 + L1P4 LINE L1 5067 5496 -665 * 3081 139 28 11 chr10 28592677 28593245 -116996043 + L1M2 LINE L1 5219 5797 -503 480 282 176 0 chr10 28593217 28593405 -116995883 + L1PA16 LINE L1 5936 6156 -10 * 1991 135 3 10 chr10 28593433 28593730 -116995558 + AluSq SINE Alu 1 295 -18 2067 149 95 46 chr10 28593731 28594227 -116995061 + L1MA5 LINE L1 5776 6295 -5 398 259 202 6 chr10 28594257 28594436 -116994852 + MLT1G1 LTR MaLR 78 251 -279 * 559 234 69 7 chr10 28594433 28594578 -116994710 + MLT1G1 LTR MaLR 429 582 -13 256 305 10 0 chr10 28594878 28594976 -116994312 - MLT1G3 LTR MaLR -180 415 228 1754 143 16 147 chr10 28594980 28595136 -116994152 - L1 LINE L1 -908 5238 5063 2091 68 0 15 chr10 28595136 28595399 -116993889 - AluY SINE Alu -52 259 1 1754 143 16 147 chr10 28595399 28595738 -116993550 - L1 LINE L1 -1083 5063 4808 2268 86 24 0 chr10 28595960 28596252 -116993036 + AluY SINE Alu 1 299 -12 30 27 0 0 chr10 28597215 28597252 -116992036 + AT_rich Low_complexity Low_complexity 1 37 0 1117 165 5 31 chr10 28597294 28597488 -116991800 - AluJo SINE Alu -123 189 1 420 216 222 6 chr10 28597606 28597768 -116991520 - L1ME1 LINE L1 -4 6162 5966 1730 119 84 21 chr10 28597817 28598102 -116991186 + AluSg SINE Alu 1 303 -7 1775 157 3 20 chr10 28598105 28598405 -116990883 + AluJo SINE Alu 1 295 -17 200 191 0 0 chr10 28598437 28598479 -116990809 + (TG)n Simple_repeat Simple_repeat 1 42 0 379 337 86 6 chr10 28598863 28599026 -116990262 - MIR3 SINE MIR -3 205 30 23 0 0 0 chr10 28600084 28600107 -116989181 + AT_rich Low_complexity Low_complexity 1 23 0 437 189 75 9 chr10 28600820 28600926 -116988362 - L1MA9 LINE L1 -37 6275 6163 1776 183 10 0 chr10 28601560 28601861 -116987427 - AluSx SINE Alu -8 304 1 927 224 0 0 chr10 28602962 28603127 -116986161 + FAM SINE Alu 1 165 -10 1963 138 0 47 chr10 28603586 28603906 -116985382 + AluJo SINE Alu 1 305 -7 2262 101 0 3 chr10 28605255 28605553 -116983735 + AluSg SINE Alu 1 297 -13 26 50 0 0 chr10 28606342 28606382 -116982906 + AT_rich Low_complexity Low_complexity 1 40 0 2037 130 3 10 chr10 28606719 28607018 -116982270 - AluSx SINE Alu -11 301 5 245 298 126 95 chr10 28607950 28608303 -116980985 + L2 LINE L2 2745 3108 -164 561 229 43 0 chr10 28609388 28609528 -116979760 - L1MC4 LINE L1 -141 7901 7756 1586 208 83 19 chr10 28609543 28610066 -116979222 - L1MC4 LINE L1 -332 7710 7005 2971 214 40 64 chr10 28610081 28611026 -116978262 - L1MD3 LINE L1 -1 8038 7133 451 175 21 21 chr10 28611077 28611174 -116978114 - L1MC4 LINE L1 -1041 7001 6905 324 138 50 75 chr10 28611186 28611242 -116978046 - L1MC4 LINE L1 -1507 6535 6480 3792 162 57 48 chr10 28611242 28612096 -116977192 - MER6 DNA MER2_type -3 862 1 324 138 50 75 chr10 28612096 28612119 -116977169 - L1MC4 LINE L1 -1562 6480 6458 2071 182 46 116 chr10 28612447 28613105 -116976183 + LTR9 LTR ERV1 1 612 0 495 214 251 35 chr10 28613242 28613361 -116975927 - L1M4 LINE L1 -1489 4657 4565 2151 83 3 21 chr10 28613361 28613672 -116975616 - AluY SINE Alu 0 306 1 495 214 251 35 chr10 28613672 28614066 -116975222 - L1M4 LINE L1 -1581 4565 4032 801 187 22 0 chr10 28614109 28614248 -116975040 - MLT1E1 LTR MaLR 0 654 513 712 206 36 24 chr10 28614255 28614620 -116974668 + LTR9-int LTR ERV1 196 684 -5914 299 159 14 29 chr10 28614979 28615048 -116974240 + LTR9-int LTR ERV1 743 810 -5788 1901 78 19 183 chr10 28616376 28616787 -116972501 - LTR14A LTR ERVK 0 344 1 2134 118 0 0 chr10 28617827 28618114 -116971174 - AluSc SINE Alu -22 287 1 592 214 19 0 chr10 28618122 28618225 -116971063 - FLAM_C SINE Alu -36 107 3 347 328 6 70 chr10 28618393 28618564 -116970724 + MER4A-int LTR ERV1 2549 2708 -4093 264 270 43 60 chr10 28619326 28619511 -116969777 + MER4A-int LTR ERV1 4561 4742 -3014 1207 316 57 44 chr10 28620501 28621527 -116967761 + MER4A-int LTR ERV1 5633 6671 -451 399 41 0 0 chr10 28621885 28621934 -116967354 + (TG)n Simple_repeat Simple_repeat 2 50 0 480 272 72 31 chr10 28621937 28622132 -116967156 + MER4A-int LTR ERV1 6395 6597 -1 2173 123 0 38 chr10 28622138 28622479 -116966809 + MER4A LTR ERV1 1 328 -336 475 72 0 29 chr10 28622570 28622639 -116966649 + MER4A LTR ERV1 356 422 -242 2160 87 7 21 chr10 28622665 28622954 -116966334 + AluSp SINE Alu 13 297 -16 528 175 196 35 chr10 28622975 28623118 -116966170 + MER4C LTR ERV1 300 465 0 770 178 109 83 chr10 28623120 28623396 -116965892 + MER4-int LTR ERV1 1 283 -6315 462 201 120 27 chr10 28623463 28623647 -116965641 + MER4-int LTR ERV1 473 673 -5925 890 168 0 0 chr10 28625498 28625629 -116963659 - FLAM_C SINE Alu -1 132 2 262 196 0 0 chr10 28625753 28625804 -116963484 + MER4A-int LTR ERV1 3104 3154 -1800 8201 20 0 0 chr10 28626966 28628540 -116960748 - L1PA4 LINE L1 -16 6139 4566 568 339 42 58 chr10 28629265 28629932 -116959356 + MER4A-int LTR ERV1 2139 2794 -1853 1359 324 51 37 chr10 28630367 28631384 -116957904 + MER4A-int LTR ERV1 5633 6663 -459 768 196 22 80 chr10 28631751 28631975 -116957313 + MER4A-int LTR ERV1 6385 6595 -3 1999 143 9 59 chr10 28631984 28632380 -116956908 + MER4A LTR ERV1 1 224 -241 298 218 0 0 chr10 28632637 28632692 -116956596 + MER4-int LTR ERV1 750 804 -5794 2732 159 16 26 chr10 28632792 28633245 -116956043 + MER83 LTR ERV1 1 448 0 2401 63 10 0 chr10 28635150 28635453 -116953835 - AluY SINE Alu -5 306 1 1955 121 0 17 chr10 28635910 28636225 -116953063 - AluSx SINE Alu 0 310 1 180 0 26 79 chr10 28636437 28636475 -116952813 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 240 240 67 0 chr10 28637376 28637451 -116951837 - LTR40a LTR ERVL 0 519 440 345 305 49 59 chr10 28637455 28637658 -116951630 + LTR40a LTR ERVL 209 409 -110 297 293 0 0 chr10 28637656 28637714 -116951574 - LTR40a LTR ERVL -222 297 240 * 356 216 196 61 chr10 28637795 28637879 -116951409 - LTR40a LTR ERVL -351 168 97 2422 90 0 0 chr10 28637879 28638179 -116951109 + AluSx SINE Alu 1 300 -12 356 216 196 61 chr10 28638179 28638242 -116951046 - LTR40a LTR ERVL -422 97 1 334 0 43 0 chr10 28638505 28638551 -116950737 + (TTTA)n Simple_repeat Simple_repeat 2 49 0 1832 136 4 4 chr10 28638562 28638834 -116950454 - AluSx SINE Alu -40 272 1 1541 176 46 40 chr10 28638867 28639169 -116950119 + AluJo SINE Alu 1 304 -8 377 282 86 21 chr10 28639364 28639598 -116949690 + L1MEc LINE L1 1390 1604 -4780 310 281 45 0 chr10 28640304 28640393 -116948895 + L1 LINE L1 4739 4831 -1315 1677 157 10 33 chr10 28641319 28641624 -116947664 - AluJo SINE Alu -14 298 1 414 185 0 0 chr10 28642110 28642191 -116947097 - AluS SINE Alu -4 306 226 274 180 101 34 chr10 28642231 28642320 -116946968 + L1P LINE L1 3878 3972 -2174 1669 225 33 110 chr10 28642386 28642985 -116946303 - MER74A LTR ERVL -5 553 1 1891 158 66 64 chr10 28643391 28643829 -116945459 + Tigger6a DNA MER2_type 38 476 -607 2391 147 59 17 chr10 28643940 28644315 -116944973 - MSTB LTR MaLR 0 426 31 1865 141 75 36 chr10 28644315 28644676 -116944612 - THE1C LTR MaLR 0 375 1 2391 147 59 17 chr10 28644676 28644709 -116944579 - MSTB LTR MaLR -395 31 1 354 199 17 152 chr10 28644718 28644949 -116944339 + L1MC5 LINE L1 7382 7581 -380 2034 111 0 0 chr10 28644951 28645222 -116944066 + AluSg1 SINE Alu 1 271 -38 198 91 0 0 chr10 28645231 28645264 -116944024 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 989 149 0 0 chr10 28695376 28695524 -116893764 + AluJb SINE Alu 149 296 -16 229 184 0 0 chr10 28695524 28695562 -116893726 + Tigger4(Zombi) DNA MER2_type 41 78 -2653 1877 107 16 0 chr10 28695563 28695816 -116893472 + AluSx SINE Alu 30 286 -26 1441 164 59 12 chr10 28696110 28696366 -116892922 + AluJb SINE Alu 11 278 -34 2179 84 32 3 chr10 28698144 28698428 -116890860 + AluSq SINE Alu 1 292 -21 2102 120 7 23 chr10 28698890 28699191 -116890097 + AluSx SINE Alu 1 296 -16 1920 125 14 4 chr10 28701020 28701342 -116887946 - AluSq SINE Alu 0 325 1 2534 79 0 0 chr10 28701431 28701735 -116887553 - AluSc SINE Alu -4 305 2 2150 82 43 0 chr10 28701994 28702275 -116887013 + AluSp SINE Alu 2 294 -19 2297 113 6 0 chr10 28703182 28703493 -116885795 - AluSq SINE Alu 0 313 1 216 97 0 0 chr10 28703744 28703775 -116885513 + (TCCC)n Simple_repeat Simple_repeat 4 34 0 449 17 0 17 chr10 28703786 28703845 -116885443 + (TG)n Simple_repeat Simple_repeat 2 59 0 1563 117 13 9 chr10 28703891 28704121 -116885167 + AluSg/x SINE Alu 73 303 -7 393 96 0 0 chr10 28704121 28704173 -116885115 - U2 snRNA snRNA -136 52 1 542 295 46 72 chr10 28704192 28704582 -116884706 + MLT1J LTR MaLR 132 511 0 2332 86 3 10 chr10 28704641 28704945 -116884343 + AluSp SINE Alu 1 302 -11 2058 120 0 3 chr10 28705001 28705323 -116883965 + AluSx SINE Alu 1 321 0 2422 72 0 0 chr10 28705388 28705681 -116883607 + AluSc SINE Alu 1 293 -16 2244 97 10 0 chr10 28706593 28706883 -116882405 + AluSp SINE Alu 1 293 -20 236 240 132 66 chr10 28707098 28707219 -116882069 - MIR SINE MIR -77 185 57 29 47 0 0 chr10 28707688 28707731 -116881557 + AT_rich Low_complexity Low_complexity 1 43 0 1774 147 56 3 chr10 28708318 28708603 -116880685 - AluSx SINE Alu -12 300 1 21 0 0 0 chr10 28708614 28708635 -116880653 + AT_rich Low_complexity Low_complexity 1 21 0 367 301 30 38 chr10 28708798 28708931 -116880357 - L2 LINE L2 -4 3268 3137 2166 110 7 0 chr10 28709502 28709811 -116879477 + AluY SINE Alu 1 311 0 1117 121 0 12 chr10 28709861 28710027 -116879261 - AluSg/x SINE Alu -12 298 135 1373 128 92 12 chr10 28710430 28710681 -116878607 + AluY SINE Alu 33 303 -8 4020 75 69 4 chr10 28710712 28711109 -116878179 + MER41A LTR ERV1 1 441 -113 2256 99 0 43 chr10 28711109 28711431 -116877857 - AluSx SINE Alu -4 308 1 4020 75 69 4 chr10 28711431 28711553 -116877735 + MER41A LTR ERV1 441 554 0 1472 193 37 3 chr10 28711564 28711859 -116877429 + AluJo SINE Alu 1 305 -7 1913 119 0 0 chr10 28712198 28712451 -116876837 + AluSx SINE Alu 5 257 -55 325 159 0 63 chr10 28712606 28712669 -116876619 - L2 LINE L2 0 3313 3255 1761 143 16 48 chr10 28713643 28713958 -116875330 - AluJo SINE Alu -6 306 2 2319 107 0 7 chr10 28714134 28714442 -116874846 + AluSq SINE Alu 5 310 -3 798 132 0 9 chr10 28714492 28714606 -116874682 - FLAM_C SINE Alu -25 118 6 994 174 17 6 chr10 28714656 28714828 -116874460 + FAM SINE Alu 2 175 0 2586 62 0 0 chr10 28715519 28715828 -116873460 + AluY SINE Alu 1 309 -2 835 171 185 38 chr10 28716292 28716503 -116872785 - AluSx SINE Alu -70 242 1 1341 176 77 15 chr10 28716601 28716874 -116872414 - AluJo SINE Alu -22 290 1 22 56 0 0 chr10 28716964 28717000 -116872288 + AT_rich Low_complexity Low_complexity 1 36 0 1323 167 13 9 chr10 28717013 28717241 -116872047 + AluJb SINE Alu 3 231 -81 1700 124 8 4 chr10 28717381 28717640 -116871648 - AluY SINE Alu -51 260 1 500 17 0 0 chr10 28717660 28717718 -116871570 - MER41A LTR ERV1 -97 457 400 2184 91 17 3 chr10 28717781 28718078 -116871210 + AluSx SINE Alu 1 301 -11 310 283 53 44 chr10 28718080 28718193 -116871095 + MIR3 SINE MIR 41 154 -54 280 350 29 19 chr10 28718526 28718629 -116870659 + MIR SINE MIR 2 105 -157 180 226 0 0 chr10 28718651 28718682 -116870606 + L2 LINE L2 3264 3294 -19 733 325 77 31 chr10 28718792 28719183 -116870105 - L2 LINE L2 -1 3312 2904 2080 233 113 30 chr10 28719185 28719310 -116869978 - L2 LINE L2 -781 2533 2420 2140 99 27 3 chr10 28719310 28719603 -116869685 - AluSq SINE Alu -13 300 1 2080 233 113 30 chr10 28719603 28720203 -116869085 - L2 LINE L2 -894 2420 1748 242 270 230 11 chr10 28720271 28720445 -116868843 - L2 LINE L2 -1921 1393 1182 345 278 41 0 chr10 28720567 28720664 -116868624 + L3 LINE CR1 1460 1560 -17 1277 133 0 0 chr10 28721067 28721247 -116868041 - AluJ SINE Alu -4 308 129 1671 183 0 13 chr10 28721255 28721556 -116867732 - AluJo SINE Alu -15 297 1 775 169 0 8 chr10 28721605 28721723 -116867565 - AluJ SINE Alu -192 120 4 1590 215 129 22 chr10 28722311 28722799 -116866489 - L1ME3A LINE L1 0 6170 5631 319 200 56 11 chr10 28723667 28723757 -116865531 - L1MC4 LINE L1 -6 8036 7943 1429 175 57 0 chr10 28723772 28724018 -116865270 - AluJb SINE Alu -52 260 1 403 196 125 107 chr10 28724036 28724204 -116865084 - L1MC4 LINE L1 -105 7937 7767 650 151 0 0 chr10 28724204 28724297 -116864991 + AluSx SINE Alu 3 95 -218 1638 99 14 5 chr10 28724314 28724537 -116864751 + AluSx SINE Alu 72 296 -14 626 187 33 172 chr10 28724538 28724870 -116864418 - L1MC4 LINE L1 -267 7775 7490 * 676 216 75 37 chr10 28724869 28725110 -116864178 - L1ME4a LINE L1 -295 5826 5577 427 250 35 81 chr10 28725210 28725382 -116863906 + L1MC4a LINE L1 7294 7457 -351 470 292 100 39 chr10 28725772 28726162 -116863126 - L1MC4 LINE L1 -4 8038 7625 27 29 0 0 chr10 28726379 28726413 -116862875 + AT_rich Low_complexity Low_complexity 1 34 0 859 153 0 0 chr10 28728004 28728135 -116861153 + AluJo SINE Alu 1 131 -181 1950 140 39 0 chr10 28728141 28728426 -116860862 + AluSx SINE Alu 3 298 -14 907 220 23 0 chr10 28728471 28728648 -116860640 + AluJo SINE Alu 118 298 -14 1428 162 165 13 chr10 28728813 28729116 -116860172 + L1MB7 LINE L1 5823 6171 -13 2223 118 0 3 chr10 28730341 28730646 -116858642 - AluSq SINE Alu -7 306 3 1608 179 24 30 chr10 28731585 28731882 -116857406 + AluJo SINE Alu 1 295 -17 569 230 0 0 chr10 28731900 28732000 -116857288 + FRAM SINE Alu 1 100 -76 1134 194 158 26 chr10 28732059 28732363 -116856925 + MER2 DNA MER2_type 1 344 0 2121 106 0 0 chr10 28732615 28732889 -116856399 - AluSx SINE Alu -38 274 1 896 149 0 15 chr10 28733295 28733429 -116855859 - FLAM_C SINE Alu -1 132 1 258 200 12 47 chr10 28733431 28733479 -116855809 + T-rich Low_complexity Low_complexity 1 46 -36 2060 151 3 0 chr10 28733479 28733790 -116855498 - AluSp SINE Alu -1 312 1 258 200 12 47 chr10 28733790 28733826 -116855462 + T-rich Low_complexity Low_complexity 46 82 0 2366 94 0 0 chr10 28734311 28734610 -116854678 + AluSx SINE Alu 1 299 -13 423 195 110 8 chr10 28734704 28734822 -116854466 + Charlie7 DNA MER1_type 2452 2581 -31 791 163 0 37 chr10 28734847 28734982 -116854306 - FLAM_C SINE Alu -3 130 1 2027 110 46 0 chr10 28735096 28735378 -116853910 - AluSx SINE Alu -17 295 1 811 301 106 3 chr10 28735439 28735798 -116853490 - L1ME4a LINE L1 -114 6007 5612 339 188 0 43 chr10 28736165 28736234 -116853054 + AluJo SINE Alu 78 143 -159 2282 73 11 7 chr10 28736234 28736520 -116852768 + AluSx SINE Alu 1 287 -25 2174 109 0 3 chr10 28737073 28737375 -116851913 - AluSc SINE Alu -8 301 1 360 151 15 9 chr10 28737466 28737547 -116851741 - MER41B LTR ERV1 -88 547 388 227 332 161 16 chr10 28737631 28737824 -116851464 - L2 LINE L2 -225 3047 2827 1548 170 4 4 chr10 28737824 28738077 -116851211 + AluSx SINE Alu 1 253 -59 1634 155 0 4 chr10 28738222 28738467 -116850821 + AluSx SINE Alu 11 254 -58 1431 160 115 4 chr10 28738726 28738995 -116850293 - AluJb SINE Alu -13 299 1 1462 105 12 17 chr10 28739269 28739622 -116849666 + L1MA3 LINE L1 5254 5607 -698 2321 88 3 0 chr10 28739622 28739918 -116849370 + AluSp SINE Alu 1 297 -16 1462 105 12 17 chr10 28739918 28740518 -116848770 + L1MA3 LINE L1 5607 6287 -18 626 156 73 9 chr10 28740544 28740653 -116848635 - FLAM_C SINE Alu -17 116 1 37 0 0 0 chr10 28740683 28740720 -116848568 + AT_rich Low_complexity Low_complexity 1 37 0 739 197 0 0 chr10 28740910 28741027 -116848261 + AluJo/FLAM SINE Alu 2 118 -194 2225 133 0 0 chr10 28741027 28741335 -116847953 + AluSx SINE Alu 1 308 -4 22 56 0 0 chr10 28741429 28741465 -116847823 + AT_rich Low_complexity Low_complexity 1 36 0 2195 110 0 13 chr10 28741844 28742012 -116847276 - AluSx SINE Alu -11 301 132 1919 127 4 0 chr10 28742012 28742288 -116847000 - AluSp SINE Alu -5 308 32 2234 101 3 3 chr10 28742288 28742586 -116846702 - AluSx SINE Alu -14 298 1 2195 110 0 13 chr10 28742586 28742716 -116846572 - AluSx SINE Alu -178 134 6 442 318 112 40 chr10 28743563 28743937 -116845351 + L2 LINE L2 255 655 -2659 1105 160 55 10 chr10 28743945 28744145 -116845143 - AluJb SINE Alu -21 291 83 2096 145 7 0 chr10 28744168 28744478 -116844810 + AluJb SINE Alu 1 312 0 2454 93 0 3 chr10 28744611 28744924 -116844364 + AluSq SINE Alu 1 312 -1 684 175 114 0 chr10 28744944 28745058 -116844230 + FLAM_A SINE Alu 1 127 -6 564 114 38 0 chr10 28745110 28745189 -116844099 + AluSg/x SINE Alu 217 298 -14 24 32 0 0 chr10 28745278 28745309 -116843979 + AT_rich Low_complexity Low_complexity 1 31 0 893 102 14 54 chr10 28745311 28745458 -116843830 - L1PB3 LINE L1 -3 6151 6011 1107 143 6 0 chr10 28745967 28746135 -116843153 + AluSx SINE Alu 1 169 -143 2063 139 0 0 chr10 28746299 28746594 -116842694 + AluSx SINE Alu 1 295 -17 1878 179 68 46 chr10 28746681 28747138 -116842150 - MLT1C LTR MaLR 0 467 1 2273 82 3 0 chr10 28747393 28747706 -116841582 - AluSp SINE Alu 0 314 1 243 235 59 0 chr10 28747708 28747776 -116841512 + L2 LINE L2 1872 1943 -1371 233 312 197 45 chr10 28747824 28748039 -116841249 + L2 LINE L2 2138 2319 -995 2412 96 0 0 chr10 28748039 28748341 -116840947 + AluSx SINE Alu 1 302 -10 233 312 197 45 chr10 28748341 28748683 -116840605 + L2 LINE L2 2319 2780 -534 2099 125 6 13 chr10 28749059 28749370 -116839918 - AluSg1 SINE Alu 0 309 1 193 362 142 16 chr10 28749834 28749961 -116839327 + L2 LINE L2 3112 3254 -18 2201 113 0 13 chr10 28750333 28750635 -116838653 + AluSx SINE Alu 1 298 -14 2352 97 0 10 chr10 28751496 28751807 -116837481 + AluY SINE Alu 1 308 -3 2646 163 27 29 chr10 28752342 28752599 -116836689 - MER83 LTR ERV1 0 448 190 2150 110 0 0 chr10 28752599 28752910 -116836378 - AluSx SINE Alu 0 311 1 2646 163 27 29 chr10 28752910 28753100 -116836188 - MER83 LTR ERV1 -258 190 1 2278 95 0 20 chr10 28753321 28753625 -116835663 + AluSq SINE Alu 1 298 -15 2123 91 14 17 chr10 28753877 28754011 -116835277 + AluSg SINE Alu 1 134 -176 2299 101 0 3 chr10 28754011 28754318 -116834970 + AluY SINE Alu 1 306 -5 2123 91 14 17 chr10 28754318 28754479 -116834809 + AluSg SINE Alu 134 295 -15 1666 177 14 0 chr10 28754686 28754968 -116834320 + AluJb SINE Alu 5 290 -22 832 156 8 8 chr10 28755036 28755164 -116834124 - FLAM_C SINE Alu -5 128 1 2011 74 0 19 chr10 28755486 28755773 -116833515 - AluSc SINE Alu 0 308 27 1926 149 19 13 chr10 28755920 28756228 -116833060 - AluJb SINE Alu -2 310 1 989 250 59 34 chr10 28756238 28756562 -116832726 - L2 LINE L2 0 3313 2982 2383 88 0 0 chr10 28756771 28757065 -116832223 - AluSx SINE Alu -6 306 13 2179 92 49 0 chr10 28757572 28757856 -116831432 + AluSx SINE Alu 5 302 -10 999 174 6 0 chr10 28757856 28758017 -116831271 + AluSg/x SINE Alu 134 295 -17 2309 83 3 0 chr10 28758026 28758315 -116830973 + AluSx SINE Alu 2 291 -21 2132 110 0 0 chr10 28759237 28759528 -116829760 + AluSg SINE Alu 1 291 -19 2107 142 0 0 chr10 28759687 28759983 -116829305 + AluSx SINE Alu 1 296 -16 595 221 18 90 chr10 28761126 28761447 -116827841 + MER34B LTR ERV1 5 360 -205 733 83 10 0 chr10 28761447 28761543 -116827745 - AluSg SINE Alu -213 97 1 762 179 0 0 chr10 28761577 28761694 -116827594 + FLAM_C SINE Alu 2 118 -25 26 0 0 27 chr10 28761696 28761708 -116827580 + AT_rich Low_complexity Low_complexity 1 12 -24 2548 21 21 0 chr10 28761708 28761988 -116827300 + L1PA5 LINE L1 5861 6146 -8 26 0 0 27 chr10 28761988 28762012 -116827276 + AT_rich Low_complexity Low_complexity 12 36 0 24 24 0 24 chr10 28762191 28762220 -116827068 + AT_rich Low_complexity Low_complexity 1 30 -11 2190 121 0 0 chr10 28762220 28762510 -116826778 + AluSx SINE Alu 1 290 -22 24 24 0 24 chr10 28762510 28762522 -116826766 + AT_rich Low_complexity Low_complexity 30 41 0 542 323 113 5 chr10 28762919 28763241 -116826047 - L2 LINE L2 -617 2697 2284 241 143 24 0 chr10 28763258 28763300 -116825988 + MLT1F1 LTR MaLR 17 59 -508 2547 156 96 19 chr10 28763300 28763819 -116825469 + L1MC1 LINE L1 5768 6326 -7 1970 132 0 14 chr10 28763819 28764115 -116825173 + AluSq SINE Alu 1 292 -21 1084 174 126 30 chr10 28764132 28764465 -116824823 + L1 LINE L1 3049 3413 -2733 24 32 0 0 chr10 28764501 28764532 -116824756 + AT_rich Low_complexity Low_complexity 1 31 0 310 216 150 65 chr10 28764568 28764721 -116824567 - MLT1K LTR MaLR -302 286 121 2209 89 3 10 chr10 28764907 28765198 -116824090 + AluSg SINE Alu 1 289 -21 417 239 28 0 chr10 28765715 28765824 -116823464 - L1MC4 LINE L1 -5 8037 7926 490 152 168 0 chr10 28765918 28766043 -116823245 - L1ME1 LINE L1 -5 6161 6016 1239 187 85 30 chr10 28766054 28766385 -116822903 - L1ME1 LINE L1 -582 5602 5254 2448 56 3 16 chr10 28766404 28766708 -116822580 - AluY SINE Alu -11 300 1 181 299 0 30 chr10 28766976 28767043 -116822245 - L2 LINE L2 -7 3265 3201 886 149 0 0 chr10 28767200 28767321 -116821967 + FLAM_C SINE Alu 1 121 -12 21 0 0 0 chr10 28767323 28767344 -116821944 + AT_rich Low_complexity Low_complexity 1 21 0 326 156 32 50 chr10 28767425 28767505 -116821783 - LTR41 LTR ERVL 0 523 440 857 174 12 124 chr10 28767516 28767659 -116821629 + AluJo SINE Alu 6 163 -149 2178 92 6 48 chr10 28767659 28767974 -116821314 + AluSx SINE Alu 2 303 -9 2217 119 0 7 chr10 28767984 28768286 -116821002 + AluSx SINE Alu 3 302 -10 857 174 12 124 chr10 28768286 28768373 -116820915 + AluJo SINE Alu 173 220 -92 2391 85 3 0 chr10 28768404 28768698 -116820590 + AluSg SINE Alu 1 295 -15 306 250 176 27 chr10 28769301 28769530 -116819758 + LTR41 LTR ERVL 510 795 0 1547 127 130 16 chr10 28769698 28769951 -116819337 + AluSg SINE Alu 14 295 -15 527 144 29 0 chr10 28770617 28770756 -116818532 + (TA)n Simple_repeat Simple_repeat 2 144 0 2080 134 3 7 chr10 28770873 28771180 -116818108 + AluSx SINE Alu 1 306 -6 1089 228 134 55 chr10 28771532 28772314 -116816974 + L1ME LINE L1 1107 1940 -4706 1787 171 7 0 chr10 28772355 28772681 -116816607 - AluSx SINE Alu 0 328 1 419 208 54 13 chr10 28772690 28772871 -116816417 + L1ME LINE L1 2525 2755 -3931 2431 70 0 16 chr10 28772871 28773185 -116816103 + AluY SINE Alu 1 309 -2 2301 72 10 13 chr10 28773195 28773501 -116815787 + AluY SINE Alu 1 305 -6 25 0 0 0 chr10 28774124 28774149 -116815139 + AT_rich Low_complexity Low_complexity 1 25 0 423 0 0 0 chr10 28774562 28774609 -116814679 + (TG)n Simple_repeat Simple_repeat 2 48 0 1726 104 100 4 chr10 28774815 28775097 -116814191 - AluSq SINE Alu 0 307 1 2398 86 3 0 chr10 28775434 28775737 -116813551 + AluSg SINE Alu 1 304 -6 1972 122 27 20 chr10 28775906 28776201 -116813087 + AluSx SINE Alu 1 297 -15 1283 217 112 0 chr10 28776743 28777001 -116812287 + AluJo SINE Alu 1 287 -15 195 167 0 0 chr10 28777003 28777045 -116812243 + (TATG)n Simple_repeat Simple_repeat 3 44 0 314 333 175 4 chr10 28777091 28777314 -116811974 + L1ME LINE L1 4226 4480 -2164 386 297 126 50 chr10 28777377 28777892 -116811396 + L1ME LINE L1 4603 5156 -1488 674 292 120 47 chr10 28778420 28778886 -116810402 + L1ME LINE L1 5816 6315 -304 795 111 21 175 chr10 28779275 28779511 -116809777 + AluSp SINE Alu 124 330 0 749 130 19 0 chr10 28779571 28779679 -116809609 + FLAM_C SINE Alu 16 125 -18 456 358 121 9 chr10 28780130 28780460 -116808828 + L2 LINE L2 2365 2731 -583 182 417 12 0 chr10 28780824 28780908 -116808380 + L2 LINE L2 3186 3270 -2 1723 205 30 0 chr10 28781606 28781909 -116807379 - AluJb SINE Alu 0 312 1 22 0 0 0 chr10 28782347 28782369 -116806919 + AT_rich Low_complexity Low_complexity 1 22 0 28 0 0 0 chr10 28782390 28782418 -116806870 + AT_rich Low_complexity Low_complexity 1 28 0 226 296 40 19 chr10 28783119 28783262 -116806026 + MER5A DNA MER1_type 1 183 -6 21 0 0 31 chr10 28783351 28783362 -116805926 + AT_rich Low_complexity Low_complexity 1 11 -20 2135 116 7 3 chr10 28783362 28783672 -116805616 - AluY SINE Alu 0 311 1 21 0 0 31 chr10 28783672 28783692 -116805596 + AT_rich Low_complexity Low_complexity 11 31 0 500 17 0 0 chr10 28783693 28783751 -116805537 - MER41A LTR ERV1 -97 457 400 1307 90 6 0 chr10 28783855 28784041 -116805247 + AluSp SINE Alu 118 304 0 2305 70 7 10 chr10 28784068 28784367 -116804921 + AluY SINE Alu 1 298 -13 993 107 75 164 chr10 28785373 28785516 -116803772 + L1MD3 LINE L1 7730 7837 -158 2392 67 0 0 chr10 28785516 28785801 -116803487 + AluY SINE Alu 7 291 -20 993 107 75 164 chr10 28785801 28785938 -116803350 + L1MD3 LINE L1 7837 7985 -10 25 0 0 0 chr10 28786356 28786381 -116802907 + AT_rich Low_complexity Low_complexity 1 25 0 1214 200 55 4 chr10 28787145 28787380 -116801908 + AluJo SINE Alu 46 292 -20 820 179 0 8 chr10 28787862 28787996 -116801292 + AluJo SINE Alu 2 134 -178 1776 236 167 24 chr10 28788180 28788772 -116800516 + LTR41 LTR ERVL 1 677 -96 1535 142 9 9 chr10 28788845 28789097 -116800191 - AluSx SINE Alu 0 312 58 2182 149 43 19 chr10 28789101 28789529 -116799759 + Tigger2 DNA MER2_type 13 2718 0 452 302 54 34 chr10 28789837 28790096 -116799192 + L1ME LINE L1 5519 5786 -335 2024 153 3 10 chr10 28790096 28790409 -116798879 + AluSx SINE Alu 1 311 -1 452 302 54 34 chr10 28790409 28790444 -116798844 + L1ME LINE L1 5786 5819 -302 2101 115 3 28 chr10 28790461 28790782 -116798506 + AluSq SINE Alu 1 313 0 622 155 31 0 chr10 28790782 28790879 -116798409 + AluJo/FRAM SINE Alu 197 296 -16 262 284 43 17 chr10 28790912 28791028 -116798260 - MIR SINE MIR -11 251 133 3783 119 38 35 chr10 28791031 28791589 -116797699 + MER41B LTR ERV1 1 563 -72 2257 97 10 0 chr10 28791589 28791889 -116797399 - AluY SINE Alu -7 304 2 3783 119 38 35 chr10 28791889 28791961 -116797327 + MER41B LTR ERV1 563 633 -2 516 179 1 120 chr10 28791968 28792118 -116797170 + MSTD LTR MaLR 13 145 -251 2601 42 0 7 chr10 28792272 28792579 -116796709 + AluY SINE Alu 5 309 -2 549 324 96 10 chr10 28793513 28793849 -116795439 + L2 LINE L2 2644 3008 -264 1350 73 6 0 chr10 28795231 28795408 -116793880 - AluSq SINE Alu -5 308 131 21 0 0 0 chr10 28795963 28795984 -116793304 + GC_rich Low_complexity Low_complexity 1 21 0 254 297 59 10 chr10 28796550 28796651 -116792637 - MIR SINE MIR -72 136 31 2235 66 0 62 chr10 28796671 28796991 -116792297 - AluY SINE Alu -10 301 2 1841 107 7 65 chr10 28797179 28797488 -116791800 - AluSx SINE Alu -21 291 1 1986 77 110 4 chr10 28797498 28797771 -116791517 - AluSq SINE Alu -11 302 1 31 26 0 0 chr10 28798294 28798332 -116790956 + AT_rich Low_complexity Low_complexity 1 38 0 1372 191 58 7 chr10 28798906 28799183 -116790105 + AluJo SINE Alu 1 291 -21 304 163 0 0 chr10 28799493 28799542 -116789746 - MLT2C2 LTR ERVL 0 464 416 810 193 0 37 chr10 28799585 28799746 -116789542 + AluJo SINE Alu 1 155 -157 1655 130 20 80 chr10 28799790 28800091 -116789197 - AluSx SINE Alu -29 283 1 1429 178 36 46 chr10 28800658 28800961 -116788327 - AluJb SINE Alu -8 304 5 2414 106 0 0 chr10 28801137 28801449 -116787839 + AluSq SINE Alu 1 312 -1 2200 102 3 3 chr10 28801894 28802189 -116787099 + AluSq SINE Alu 1 295 -18 30 0 0 0 chr10 28802196 28802226 -116787062 + AT_rich Low_complexity Low_complexity 1 30 0 430 342 78 22 chr10 28802569 28803016 -116786272 + L1MC/D LINE L1 5301 5772 -2036 2174 113 0 20 chr10 28803049 28803351 -116785937 + AluSx SINE Alu 1 296 -16 351 245 74 64 chr10 28803468 28803581 -116785707 + MER46C DNA MER2_type 1 111 -227 2281 99 3 3 chr10 28803581 28803885 -116785403 - AluSq SINE Alu -9 304 1 351 245 74 64 chr10 28803885 28804014 -116785274 + MER46C DNA MER2_type 111 293 -45 2319 97 0 26 chr10 28804287 28804598 -116784690 - AluY SINE Alu -8 303 1 1037 145 0 41 chr10 28804608 28804780 -116784508 - AluSg/x SINE Alu -18 294 130 1709 170 21 7 chr10 28804816 28805105 -116784183 - AluJo SINE Alu -17 295 3 2166 108 0 0 chr10 28805319 28805606 -116783682 - AluSx SINE Alu -25 287 1 319 193 20 29 chr10 28806213 28806286 -116783002 + AluJ/FLAM SINE Alu 1 57 -245 600 86 0 37 chr10 28806286 28806367 -116782921 - AluSg/x SINE Alu -17 295 218 37 0 0 0 chr10 28806495 28806532 -116782756 + AT_rich Low_complexity Low_complexity 1 37 0 739 197 0 0 chr10 28806722 28806839 -116782449 + AluJo/FLAM SINE Alu 2 118 -194 2241 130 0 0 chr10 28806839 28807147 -116782141 + AluSx SINE Alu 1 308 -4 22 56 0 0 chr10 28807241 28807277 -116782011 + AT_rich Low_complexity Low_complexity 1 36 0 2247 105 0 13 chr10 28807656 28807824 -116781464 - AluSx SINE Alu -11 301 132 1919 127 4 0 chr10 28807824 28808100 -116781188 - AluSp SINE Alu -5 308 32 2236 104 3 3 chr10 28808100 28808398 -116780890 - AluSx SINE Alu -14 298 1 2247 105 0 13 chr10 28808398 28808533 -116780755 - AluSx SINE Alu -178 134 1 2481 57 3 3 chr10 28808822 28809123 -116780165 + AluY SINE Alu 1 301 -10 2419 96 0 0 chr10 28809133 28809445 -116779843 + AluSx SINE Alu 1 312 0 1603 159 36 0 chr10 28809503 28809755 -116779533 + AluJo SINE Alu 13 273 -39 2318 98 0 3 chr10 28810547 28810844 -116778444 - AluSx SINE Alu -16 296 1 1952 147 0 16 chr10 28811101 28811408 -116777880 + AluSx SINE Alu 1 302 -10 35 71 0 0 chr10 28812009 28812079 -116777209 + AT_rich Low_complexity Low_complexity 1 70 0 333 308 173 0 chr10 28812504 28812660 -116776628 - MER5A DNA MER1_type 0 189 7 1084 175 28 5 chr10 28812660 28812877 -116776411 + L1MC/D LINE L1 4523 4744 -1402 577 250 78 0 chr10 28813000 28813192 -116776096 + L1MC/D LINE L1 5574 5780 -2028 965 249 19 83 chr10 28813193 28813554 -116775734 - MER46C DNA MER2_type 0 338 1 1796 185 0 13 chr10 28813713 28814027 -116775261 + AluSx SINE Alu 1 310 -2 2115 137 0 3 chr10 28814637 28814950 -116774338 - AluSx SINE Alu 0 312 1 1747 160 3 32 chr10 28815699 28816012 -116773276 + AluJb SINE Alu 1 304 -8 1843 144 0 47 chr10 28816165 28816485 -116772803 + AluJo SINE Alu 7 311 -1 257 311 9 9 chr10 28816694 28816800 -116772488 + L1MC/D LINE L1 5739 5844 -1964 2278 103 0 0 chr10 28816826 28817118 -116772170 + AluSx SINE Alu 1 292 -20 694 164 0 25 chr10 28817151 28817273 -116772015 - AluSg/x SINE Alu -10 299 181 468 154 0 0 chr10 28817294 28817359 -116771929 - AluS SINE Alu -247 66 2 22 0 0 0 chr10 28817706 28817728 -116771560 + AT_rich Low_complexity Low_complexity 1 22 0 944 158 19 0 chr10 28818227 28818385 -116770903 - L1PA16 LINE L1 -2 6164 6004 336 64 0 0 chr10 28818527 28818574 -116770714 + (CA)n Simple_repeat Simple_repeat 2 48 0 1421 100 28 104 chr10 28818630 28818711 -116770577 - MER30 DNA MER1_type 0 230 144 1981 121 0 57 chr10 28818711 28819042 -116770246 - AluSx SINE Alu 0 312 1 1421 100 28 104 chr10 28819042 28819209 -116770079 - MER30 DNA MER1_type -86 144 1 207 0 0 0 chr10 28819781 28819804 -116769484 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2050 113 3 3 chr10 28819806 28820089 -116769199 - AluSx SINE Alu -29 283 1 400 220 9 46 chr10 28820144 28820253 -116769035 - MER5B DNA MER1_type -68 110 6 2124 112 0 10 chr10 28820371 28820667 -116768621 + AluSg SINE Alu 1 293 -17 351 0 0 0 chr10 28820869 28820908 -116768380 + (TA)n Simple_repeat Simple_repeat 2 40 0 2354 88 0 10 chr10 28820908 28821214 -116768074 - AluSx SINE Alu -8 304 2 375 110 0 18 chr10 28821399 28821654 -116767634 + AluSx SINE Alu 1 298 -4 2238 117 0 0 chr10 28822609 28822907 -116766381 + AluSx SINE Alu 2 299 -13 2138 139 0 0 chr10 28823328 28823630 -116765658 + AluSx SINE Alu 1 302 -10 240 86 29 0 chr10 28824248 28824283 -116765005 + U2 snRNA snRNA 1 36 -152 453 69 17 0 chr10 28824351 28824409 -116764879 - U7 snRNA snRNA -3 60 2 2228 116 7 0 chr10 28824419 28824720 -116764568 - AluSx SINE Alu -9 303 1 27 73 0 0 chr10 28825016 28825071 -116764217 + AT_rich Low_complexity Low_complexity 1 55 0 2344 100 3 0 chr10 28825238 28825539 -116763749 + AluSx SINE Alu 1 302 -10 1478 171 47 7 chr10 28825546 28825821 -116763467 + AluJb SINE Alu 6 291 -21 2361 81 3 13 chr10 28825852 28826160 -116763128 + AluSp SINE Alu 1 305 -8 21 0 0 0 chr10 28826583 28826604 -116762684 + AT_rich Low_complexity Low_complexity 1 21 0 2284 108 0 0 chr10 28826743 28827050 -116762238 + AluSx SINE Alu 1 307 -5 1936 133 7 10 chr10 28827924 28828225 -116761063 + AluJb SINE Alu 1 300 -12 256 269 86 47 chr10 28828254 28828488 -116760800 + L1ME4a LINE L1 5704 5946 -175 2193 110 13 0 chr10 28828699 28828999 -116760289 + AluSx SINE Alu 1 304 -8 2189 113 20 0 chr10 28829715 28830008 -116759280 - AluSq SINE Alu -14 299 1 2063 50 25 109 chr10 28830020 28830370 -116758918 - AluY SINE Alu 0 311 1 2167 105 3 0 chr10 28831009 28831303 -116757985 + AluSp SINE Alu 1 295 -18 427 249 144 22 chr10 28831387 28831631 -116757657 + L1MDa LINE L1 1552 1867 -4730 22 0 0 0 chr10 28831685 28831707 -116757581 + AT_rich Low_complexity Low_complexity 1 22 0 2213 85 0 3 chr10 28831831 28832141 -116757147 - AluSx SINE Alu 0 309 1 297 230 48 26 chr10 28833319 28833407 -116755881 + MIR SINE MIR 30 117 -91 807 142 7 47 chr10 28833680 28833828 -116755460 + FLAM_C SINE Alu 2 143 0 23 0 0 0 chr10 28834805 28834828 -116754460 + AT_rich Low_complexity Low_complexity 1 23 0 282 56 0 0 chr10 28835186 28835222 -116754066 + (CA)n Simple_repeat Simple_repeat 1 36 0 362 297 109 11 chr10 28835648 28835823 -116753465 + MIR SINE MIR 16 207 -55 841 204 0 25 chr10 28837194 28837356 -116751932 + FRAM SINE Alu 1 158 -18 784 118 0 0 chr10 28844297 28844399 -116744889 + AluSp/q SINE Alu 157 258 -55 27 29 0 0 chr10 28844656 28844690 -116744598 + GC_rich Low_complexity Low_complexity 1 34 0 2261 80 35 0 chr10 28845172 28845459 -116743829 + AluSc SINE Alu 1 297 -12 234 91 0 0 chr10 28845932 28845965 -116743323 + (CA)n Simple_repeat Simple_repeat 1 33 0 2032 83 0 0 chr10 28846008 28846261 -116743027 - AluSc SINE Alu -56 253 1 1783 105 0 4 chr10 28846375 28846614 -116742674 - L1PA7 LINE L1 0 6154 5917 5890 64 18 0 chr10 28846615 28847377 -116741911 + L1P LINE L1 3984 4759 -1387 21 89 0 0 chr10 28847575 28847631 -116741657 + AT_rich Low_complexity Low_complexity 1 56 0 23 33 0 0 chr10 28847773 28847803 -116741485 + AT_rich Low_complexity Low_complexity 1 30 0 243 133 0 0 chr10 28847902 28847947 -116741341 - Alu SINE Alu -6 297 253 1849 128 0 54 chr10 28848085 28848381 -116740907 + AluSx SINE Alu 1 280 -32 4491 237 60 91 chr10 28848402 28850125 -116739163 + pTR5 LTR ERV1 769 2438 0 2312 73 7 7 chr10 28852364 28852666 -116736622 - AluSg SINE Alu -8 302 1 1562 249 148 24 chr10 28853242 28853940 -116735348 - MER20B DNA MER1_type 0 784 1 183 172 0 0 chr10 28855480 28855509 -116733779 + MIR SINE MIR 94 122 -86 24 67 0 0 chr10 28855598 28855643 -116733645 + AT_rich Low_complexity Low_complexity 1 45 0 273 163 0 0 chr10 28855732 28855781 -116733507 + (TATATG)n Simple_repeat Simple_repeat 5 53 0 704 165 119 0 chr10 28855782 28855891 -116733397 - FLAM_C SINE Alu -11 122 1 240 167 21 21 chr10 28856072 28856120 -116733168 + L3 LINE CR1 1354 1401 -176 203 161 0 0 chr10 28856313 28856344 -116732944 + (TATATG)n Simple_repeat Simple_repeat 4 34 0 1991 125 7 3 chr10 28856659 28856955 -116732333 - AluSq SINE Alu -16 297 1 243 133 0 0 chr10 28857093 28857138 -116732150 + Alu SINE Alu 253 297 -6 23 33 0 0 chr10 28857236 28857266 -116732022 + AT_rich Low_complexity Low_complexity 1 30 0 1773 105 0 12 chr10 28858056 28858304 -116730984 + AluSg SINE Alu 31 275 -35 351 44 0 0 chr10 28858305 28858350 -116730938 + (TC)n Simple_repeat Simple_repeat 2 46 0 213 216 0 0 chr10 28858350 28858387 -116730901 + (TATG)n Simple_repeat Simple_repeat 3 39 0 1451 208 7 11 chr10 28858613 28858930 -116730358 - AluJo SINE Alu 0 316 1 297 271 37 19 chr10 28860566 28860673 -116728615 + MIR3 SINE MIR 97 205 -3 1697 151 47 7 chr10 28860857 28860977 -116728311 + AluJo SINE Alu 1 115 -197 219 114 0 0 chr10 28860977 28861012 -116728276 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1697 151 47 7 chr10 28861012 28861169 -116728119 + AluJo SINE Alu 115 289 -23 1030 160 0 43 chr10 28861436 28861623 -116727665 - AluSx SINE Alu 0 310 132 264 290 14 0 chr10 28861961 28862030 -116727258 - L2 LINE L2 0 3272 3203 1987 192 58 7 chr10 28862089 28862505 -116726783 - MLT1D LTR MaLR -12 493 57 4919 214 30 22 chr10 28862506 28864322 -116724966 - L1MB4 LINE L1 -91 6089 4289 186 103 0 0 chr10 28864322 28864351 -116724937 + (TG)n Simple_repeat Simple_repeat 2 30 0 4919 214 30 22 chr10 28864351 28864531 -116724757 - L1MB4 LINE L1 -1891 4289 4112 2001 134 0 32 chr10 28864531 28864845 -116724443 - AluSx SINE Alu -8 304 1 4919 214 30 22 chr10 28864845 28864958 -116724330 - L1MB4 LINE L1 -2068 4112 3969 2138 134 0 0 chr10 28864958 28865263 -116724025 - AluSx SINE Alu -7 305 1 6840 230 56 27 chr10 28865547 28868200 -116721088 - L1ME1 LINE L1 -303 6257 3523 5511 161 23 20 chr10 28868323 28870179 -116719109 + L1PA13 LINE L1 4248 6148 -15 604 171 0 0 chr10 28870182 28870270 -116719018 - AluSx SINE Alu -183 130 43 2657 273 44 21 chr10 28870282 28871903 -116717385 - L1ME1 LINE L1 -3114 3426 1517 2059 122 0 42 chr10 28872446 28872758 -116716530 - AluSx SINE Alu -13 299 1 1967 136 11 0 chr10 28873292 28873592 -116715696 - AluSx SINE Alu 0 303 1 182 369 45 18 chr10 28874746 28874857 -116714431 + MIR SINE MIR 21 134 -74 2562 257 47 17 chr10 28875022 28875511 -116713777 - L1ME1 LINE L1 -5016 1524 1051 2106 132 3 0 chr10 28875511 28875807 -116713481 - AluSx SINE Alu -15 297 1 2562 257 47 17 chr10 28875807 28876619 -116712669 - L1ME1 LINE L1 -5489 1051 22 22 0 0 0 chr10 28877340 28877362 -116711926 + AT_rich Low_complexity Low_complexity 1 22 0 246 296 93 81 chr10 28877545 28877792 -116711496 - L3 LINE CR1 -263 1314 1065 277 260 208 13 chr10 28878511 28878665 -116710623 - L2 LINE L2 0 3313 3130 383 246 276 0 chr10 28878960 28879094 -116710194 - MIR SINE MIR -5 257 87 213 250 108 75 chr10 28879145 28879188 -116710100 + MIR SINE MIR 69 109 -153 1957 150 0 4 chr10 28879188 28879468 -116709820 - AluSx SINE Alu -33 279 1 213 250 108 75 chr10 28879468 28879544 -116709744 + MIR SINE MIR 109 192 -70 839 249 68 31 chr10 28879553 28879874 -116709414 - MER46C DNA MER2_type -5 333 1 390 278 87 8 chr10 28879997 28880102 -116709186 + MIR SINE MIR 103 221 -41 2269 95 0 0 chr10 28880102 28880397 -116708891 + AluSg SINE Alu 1 295 -15 390 278 87 8 chr10 28880397 28880417 -116708871 + MIR SINE MIR 221 238 -24 21 0 0 0 chr10 28880448 28880469 -116708819 + AT_rich Low_complexity Low_complexity 1 21 0 813 196 9 85 chr10 28880984 28881208 -116708080 + MER3 DNA MER1_type 3 209 0 1699 158 14 45 chr10 28881327 28881643 -116707645 - AluJo SINE Alu 0 307 1 321 369 89 13 chr10 28882212 28882448 -116706840 + MIR SINE MIR 3 256 -6 500 120 22 0 chr10 28882740 28882832 -116706456 + L1MA7 LINE L1 6196 6289 -2 2386 88 0 7 chr10 28882842 28883147 -116706141 + AluSq SINE Alu 1 303 -10 21 0 0 0 chr10 28883368 28883389 -116705899 + AT_rich Low_complexity Low_complexity 1 21 0 453 204 41 0 chr10 28883727 28883825 -116705463 - MER99 DNA DNA -725 103 2 471 113 0 0 chr10 28884165 28884236 -116705052 + (TCTCC)n Simple_repeat Simple_repeat 3 73 0 536 183 11 0 chr10 28884247 28884340 -116704948 - AluJ/FLAM SINE Alu -215 97 4 619 266 73 66 chr10 28884474 28884733 -116704555 + MIR SINE MIR 2 262 0 1762 107 19 8 chr10 28886656 28886945 -116702343 + AluSc SINE Alu 24 309 0 405 86 0 0 chr10 28887961 28888019 -116701269 + (CA)n Simple_repeat Simple_repeat 2 59 0 10199 33 11 128 chr10 28888668 28890195 -116699093 - SVA Other Other 0 1386 38 279 0 0 0 chr10 28890200 28890231 -116699057 + (GGGAGA)n Simple_repeat Simple_repeat 1 31 0 186 184 40 92 chr10 28890784 28890860 -116698428 - L2 LINE L2 0 3313 3242 207 0 0 0 chr10 28891560 28891583 -116697705 + (CATATA)n Simple_repeat Simple_repeat 2 24 0 680 256 92 22 chr10 28891592 28891909 -116697379 - L1MC4a LINE L1 -1883 5925 5587 41968 40 4 0 chr10 28891962 28898094 -116691194 + L1PA4 LINE L1 7 6162 0 632 189 20 117 chr10 28898103 28898299 -116690989 - MER31-int LTR ERV1 -4122 814 638 285 178 139 40 chr10 28898308 28898409 -116690879 - MIR SINE MIR -34 228 118 22 35 0 0 chr10 28898448 28898477 -116690811 + AT_rich Low_complexity Low_complexity 1 29 0 2483 72 3 0 chr10 28899197 28899501 -116689787 + AluY SINE Alu 1 305 -6 216 0 0 0 chr10 28899927 28899951 -116689337 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 221 224 252 19 chr10 28901028 28901135 -116688153 + MIR SINE MIR 14 145 -117 1908 101 8 0 chr10 28901502 28901760 -116687528 - AluSg SINE Alu -16 294 35 2131 82 4 4 chr10 28901856 28902137 -116687151 - AluY SINE Alu -30 281 1 1864 176 0 0 chr10 28902456 28902758 -116686530 + AluSx SINE Alu 1 302 -10 1062 205 60 3 chr10 28903195 28903497 -116685791 - MER33 DNA MER1_type 0 324 6 2367 67 27 0 chr10 28904318 28904615 -116684673 + AluY SINE Alu 1 305 -6 192 200 0 0 chr10 28904758 28904798 -116684490 + (TA)n Simple_repeat Simple_repeat 1 40 0 776 185 0 0 chr10 28905474 28905609 -116683679 + AluJo SINE Alu 1 135 -177 25 51 0 0 chr10 28905729 28905768 -116683520 + AT_rich Low_complexity Low_complexity 1 39 0 569 202 0 0 chr10 28906219 28906323 -116682965 - U6 snRNA snRNA -2 105 2 2144 96 0 4 chr10 28908022 28908303 -116680985 - AluSc SINE Alu -18 291 12 400 87 54 0 chr10 28908310 28908402 -116680886 + (TA)n Simple_repeat Simple_repeat 2 98 0 508 81 64 23 chr10 28908418 28908591 -116680697 + (TA)n Simple_repeat Simple_repeat 1 180 0 1847 135 38 7 chr10 28908846 28909134 -116680154 + AluSq SINE Alu 7 303 -10 261 335 88 26 chr10 28909168 28909362 -116679926 + MIR SINE MIR 26 231 -31 569 202 0 0 chr10 28911175 28911279 -116678009 + U6 snRNA snRNA 2 105 -2 25 51 0 0 chr10 28911734 28911773 -116677515 + AT_rich Low_complexity Low_complexity 1 39 0 776 185 0 0 chr10 28911893 28912028 -116677260 - AluJo SINE Alu -177 135 1 192 200 0 0 chr10 28912704 28912744 -116676544 + (TA)n Simple_repeat Simple_repeat 1 40 0 2192 84 3 7 chr10 28912886 28913172 -116676116 - AluSx SINE Alu -5 307 23 467 331 76 18 chr10 28913277 28913606 -116675682 - L1M4 LINE L1 -3679 2467 2120 520 183 30 179 chr10 28914888 28915123 -116674165 - L2 LINE L2 -1 3312 3113 836 195 6 24 chr10 28915123 28915287 -116674001 - AluJo SINE Alu -151 161 1 1705 158 39 11 chr10 28915297 28915582 -116673706 - AluJb SINE Alu -19 293 1 204 209 31 194 chr10 28917061 28917190 -116672098 - MIR SINE MIR -87 175 68 2037 146 0 19 chr10 28917275 28917584 -116671704 + AluSx SINE Alu 1 303 -9 1665 143 18 35 chr10 28918044 28918330 -116670958 + AluJo SINE Alu 1 281 -31 317 296 131 30 chr10 28919233 28919528 -116669760 - L1 LINE L1 -1315 4831 4502 25 31 0 0 chr10 28920002 28920034 -116669254 + AT_rich Low_complexity Low_complexity 1 32 0 2152 104 0 16 chr10 28920965 28921274 -116668014 - AluY SINE Alu -7 304 1 803 219 0 24 chr10 28921291 28921499 -116667789 + FRAM SINE Alu 1 196 0 1740 185 30 0 chr10 28922017 28922319 -116666969 + AluJb SINE Alu 1 311 -1 27 62 0 0 chr10 28922326 28922374 -116666914 + AT_rich Low_complexity Low_complexity 1 48 0 196 192 137 0 chr10 28922660 28922733 -116666555 + MIR SINE MIR 131 213 -49 5614 112 16 11 chr10 28922890 28922994 -116666294 - L1PA11 LINE L1 -2 6172 6070 414 0 0 0 chr10 28922994 28923040 -116666248 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 1940 132 0 24 chr10 28923040 28923327 -116665961 - AluSx SINE Alu -28 284 5 5614 112 16 11 chr10 28923327 28924342 -116664946 - L1PA11 LINE L1 -103 6071 5037 213 327 0 0 chr10 28924342 28924394 -116664894 + MIR3 SINE MIR 115 166 -42 250 354 72 11 chr10 28925153 28925334 -116663954 + L2 LINE L2 2181 2372 -942 23 0 0 0 chr10 28925542 28925565 -116663723 + AT_rich Low_complexity Low_complexity 1 23 0 2257 86 3 3 chr10 28925859 28926151 -116663137 - AluY SINE Alu -14 297 6 727 251 76 28 chr10 28926205 28926416 -116662872 + MER58A DNA MER1_type 4 224 0 237 313 25 0 chr10 28926495 28926575 -116662713 + MLT1L LTR MaLR 1 82 -533 454 294 95 19 chr10 28926606 28926817 -116662471 + MLT1L LTR MaLR 144 370 -245 1982 122 41 3 chr10 28926843 28927137 -116662151 + AluSg SINE Alu 1 305 -5 1775 138 18 4 chr10 28927748 28928057 -116661231 - AluSx SINE Alu 0 315 3 22 56 0 0 chr10 28928185 28928221 -116661067 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr10 28928598 28928626 -116660662 + AT_rich Low_complexity Low_complexity 1 28 0 1920 168 43 47 chr10 28929052 28929492 -116659796 + Tigger2 DNA MER2_type 1 2718 0 401 109 0 0 chr10 28929543 28929598 -116659690 + FLAM SINE Alu 67 121 -12 357 43 0 0 chr10 28929602 28929649 -116659639 + (CATA)n Simple_repeat Simple_repeat 2 48 0 41 21 0 0 chr10 28929764 28929812 -116659476 + AT_rich Low_complexity Low_complexity 1 48 0 220 244 0 0 chr10 28930081 28930126 -116659162 + (TA)n Simple_repeat Simple_repeat 1 45 0 189 328 109 0 chr10 28930602 28930721 -116658567 + MIR SINE MIR 90 221 -41 820 176 0 0 chr10 28930795 28930931 -116658357 + AluJo SINE Alu 1 136 -176 25 75 0 0 chr10 28931067 28931120 -116658168 + AT_rich Low_complexity Low_complexity 1 53 0 578 200 0 0 chr10 28931558 28931663 -116657625 - U6 snRNA snRNA -2 105 1 754 226 10 29 chr10 28933500 28933708 -116655580 + MSTB2 LTR MaLR 248 451 -6 2626 162 23 2 chr10 28933708 28934190 -116655098 + L1MC1 LINE L1 5842 6333 0 660 265 103 36 chr10 28934193 28934746 -116654542 + L1MEd LINE L1 947 1579 -4731 231 61 0 0 chr10 28934778 28934811 -116654477 + (TG)n Simple_repeat Simple_repeat 2 34 0 662 208 0 8 chr10 28935099 28935224 -116654064 + FLAM_C SINE Alu 1 124 -19 868 38 19 0 chr10 28935491 28935596 -116653692 - AluY SINE Alu -11 300 194 617 350 85 27 chr10 28935600 28935801 -116653487 - L1M4 LINE L1 -3353 2793 2605 2065 94 10 7 chr10 28935801 28936089 -116653199 - AluSx SINE Alu -1 311 23 617 350 85 27 chr10 28936089 28936524 -116652764 - L1M4 LINE L1 -3541 2605 2120 319 318 29 69 chr10 28936931 28937104 -116652184 - HAL1 LINE L1 -737 1770 1605 460 177 28 222 chr10 28937807 28938055 -116651233 - L2 LINE L2 -1 3312 3113 844 189 6 24 chr10 28938055 28938219 -116651069 - AluJo SINE Alu -151 161 1 1693 158 39 11 chr10 28938229 28938514 -116650774 - AluJb SINE Alu -19 293 1 207 209 31 194 chr10 28939993 28940122 -116649166 - MIR SINE MIR -87 175 68 2008 146 0 19 chr10 28940207 28940516 -116648772 + AluSx SINE Alu 1 303 -9 1659 143 18 35 chr10 28940976 28941262 -116648026 + AluJo SINE Alu 1 281 -31 307 314 171 43 chr10 28942165 28942445 -116646843 - L1 LINE L1 -1315 4831 4516 25 31 0 0 chr10 28942933 28942965 -116646323 + AT_rich Low_complexity Low_complexity 1 32 0 2146 104 0 16 chr10 28943896 28944205 -116645083 - AluY SINE Alu -7 304 1 801 219 0 24 chr10 28944222 28944433 -116644855 + FRAM SINE Alu 1 199 0 1730 178 31 0 chr10 28944951 28945243 -116644045 + AluJb SINE Alu 1 301 -11 27 62 0 0 chr10 28945260 28945308 -116643980 + AT_rich Low_complexity Low_complexity 1 48 0 196 192 137 0 chr10 28945594 28945667 -116643621 + MIR SINE MIR 131 213 -49 5645 111 16 11 chr10 28945824 28945928 -116643360 - L1PA11 LINE L1 -2 6172 6070 486 0 0 0 chr10 28945928 28945982 -116643306 + (TTTA)n Simple_repeat Simple_repeat 2 55 0 1952 129 0 24 chr10 28945982 28946269 -116643019 - AluSx SINE Alu -28 284 5 5645 111 16 11 chr10 28946269 28947284 -116642004 - L1PA11 LINE L1 -103 6071 5037 204 346 0 0 chr10 28947284 28947336 -116641952 + MIR3 SINE MIR 115 166 -42 250 354 72 11 chr10 28948096 28948277 -116641011 + L2 LINE L2 2181 2372 -942 23 0 0 0 chr10 28948485 28948508 -116640780 + AT_rich Low_complexity Low_complexity 1 23 0 2242 89 3 3 chr10 28948800 28949092 -116640196 - AluY SINE Alu -14 297 6 727 251 76 28 chr10 28949146 28949357 -116639931 + MER58A DNA MER1_type 4 224 0 237 313 25 0 chr10 28949436 28949516 -116639772 + MLT1L LTR MaLR 1 82 -533 439 299 95 19 chr10 28949547 28949758 -116639530 + MLT1L LTR MaLR 144 370 -245 1982 122 41 3 chr10 28949784 28950078 -116639210 + AluSg SINE Alu 1 305 -5 1775 138 18 4 chr10 28950689 28950998 -116638290 - AluSx SINE Alu 0 315 3 22 56 0 0 chr10 28951126 28951162 -116638126 + AT_rich Low_complexity Low_complexity 1 36 0 21 36 0 0 chr10 28951539 28951567 -116637721 + AT_rich Low_complexity Low_complexity 1 28 0 1920 168 43 47 chr10 28951993 28952433 -116636855 + Tigger2 DNA MER2_type 1 2718 0 401 109 0 0 chr10 28952484 28952539 -116636749 + FLAM SINE Alu 67 121 -12 360 59 0 0 chr10 28952543 28952594 -116636694 + (CATA)n Simple_repeat Simple_repeat 2 52 0 41 21 0 0 chr10 28952709 28952757 -116636531 + AT_rich Low_complexity Low_complexity 1 48 0 220 244 0 0 chr10 28953026 28953071 -116636217 + (TA)n Simple_repeat Simple_repeat 1 45 0 189 328 109 0 chr10 28953547 28953666 -116635622 + MIR SINE MIR 90 221 -41 820 176 0 0 chr10 28953740 28953876 -116635412 + AluJo SINE Alu 1 136 -176 25 75 0 0 chr10 28954012 28954065 -116635223 + AT_rich Low_complexity Low_complexity 1 53 0 578 200 0 0 chr10 28954503 28954608 -116634680 - U6 snRNA snRNA -2 105 1 2231 114 0 3 chr10 28956630 28956937 -116632351 - AluSq SINE Alu -7 306 1 2161 136 0 0 chr10 28957189 28957490 -116631798 - AluSx SINE Alu -10 302 2 207 244 93 35 chr10 28958176 28958262 -116631026 + L2 LINE L2 3175 3265 -48 22 70 0 0 chr10 28959174 28959217 -116630071 + AT_rich Low_complexity Low_complexity 1 43 0 284 321 19 0 chr10 28959272 28959378 -116629910 - MER102b DNA MER1_type -1 340 233 684 251 101 64 chr10 28960430 28960686 -116628602 + MIR SINE MIR 2 261 -1 457 272 11 33 chr10 28960778 28960962 -116628326 + MER104 DNA MER2_type 1 180 0 23 68 0 0 chr10 28961766 28961810 -116627478 + AT_rich Low_complexity Low_complexity 1 44 0 302 337 79 28 chr10 28962212 28962390 -116626898 - L1ME LINE L1 -444 5677 5491 1774 251 62 21 chr10 28962825 28963530 -116625758 - L1ME LINE L1 -941 5205 4472 1226 146 32 4 chr10 28963921 28964156 -116625132 - L1M4 LINE L1 -441 5733 5490 2289 91 6 15 chr10 28965097 28965438 -116623850 - L1PA12 LINE L1 -1 6167 5830 27 29 0 0 chr10 28965600 28965634 -116623654 + AT_rich Low_complexity Low_complexity 1 34 0 1035 93 35 0 chr10 28966201 28966373 -116622915 + CT-rich Low_complexity Low_complexity 3 180 0 2220 118 0 0 chr10 28967138 28967615 -116621673 - AluSx SINE Alu 0 477 1 256 298 10 10 chr10 28967731 28967835 -116621453 - MER113 DNA MER1_type? -313 208 105 1130 145 22 57 chr10 28970679 28970697 -116618591 - LTR49-int LTR ERV1 -4741 1590 1573 5225 110 18 5 chr10 28970697 28971512 -116617776 - L1MA1 LINE L1 0 6302 5477 1130 145 22 57 chr10 28971512 28971549 -116617739 - LTR49-int LTR ERV1 -4758 1573 1536 2007 136 3 3 chr10 28971549 28971844 -116617444 - AluSg SINE Alu -15 295 1 1130 145 22 57 chr10 28971844 28972014 -116617274 - LTR49-int LTR ERV1 -4795 1536 1372 5093 176 39 27 chr10 28972109 28972138 -116617150 - LTR49-int LTR ERV1 -4933 1398 1371 1032 187 10 5 chr10 28972138 28972341 -116616947 + L1PA16 LINE L1 5959 6162 -4 5093 176 39 27 chr10 28972341 28973426 -116615862 - LTR49-int LTR ERV1 -4960 1371 361 1885 177 42 10 chr10 28973427 28973843 -116615445 - LTR49-int LTR ERV1 -4615 1331 1 1460 208 72 11 chr10 28973847 28974208 -116615080 - LTR49 LTR ERV1 -2 593 211 2883 62 0 0 chr10 28974658 28974999 -116614289 - L1PA7 LINE L1 -13 6141 5801 28 29 0 0 chr10 28975240 28975275 -116614013 + AT_rich Low_complexity Low_complexity 1 35 0 317 196 0 28 chr10 28975354 28975461 -116613827 + (CA)n Simple_repeat Simple_repeat 1 104 0 252 184 0 0 chr10 28975496 28975545 -116613743 + (CA)n Simple_repeat Simple_repeat 2 50 0 282 143 0 0 chr10 28976807 28976849 -116612439 - MER41-int LTR ERV1 -4679 1267 1226 253 252 29 0 chr10 28977015 28977118 -116612170 + (TA)n Simple_repeat Simple_repeat 1 106 0 226 246 0 0 chr10 28977887 28977944 -116611344 + (TA)n Simple_repeat Simple_repeat 2 58 0 441 66 0 0 chr10 28978008 28978069 -116611219 + (TCTA)n Simple_repeat Simple_repeat 3 63 0 308 311 8 0 chr10 28978070 28978202 -116611086 + (TA)n Simple_repeat Simple_repeat 2 134 0 1791 109 4 15 chr10 28978805 28979071 -116610217 + AluSx SINE Alu 41 303 -9 237 230 0 0 chr10 28979881 28979955 -116609333 + (TA)n Simple_repeat Simple_repeat 1 74 0 195 42 0 0 chr10 28979980 28980004 -116609284 + (CA)n Simple_repeat Simple_repeat 1 24 0 189 74 0 0 chr10 28980192 28980219 -116609069 + (TATG)n Simple_repeat Simple_repeat 4 30 0 198 156 0 0 chr10 28980466 28980511 -116608777 + (TA)n Simple_repeat Simple_repeat 1 45 0 1067 283 46 38 chr10 28981017 28981515 -116607773 + MLT1J LTR MaLR 1 502 -9 1215 209 35 4 chr10 28982478 28982732 -116606556 - MER31B LTR ERV1 -203 263 2 624 160 10 0 chr10 28982835 28982935 -116606353 - MLT1E1 LTR MaLR -31 623 523 25 0 0 0 chr10 28983339 28983364 -116605924 + AT_rich Low_complexity Low_complexity 1 25 0 2300 169 23 21 chr10 28984420 28984851 -116604437 - L1MB7 LINE L1 -67 6117 5686 1237 207 114 4 chr10 28986848 28987119 -116602169 - AluJb SINE Alu 0 302 2 1837 124 58 7 chr10 28987133 28987407 -116601881 - AluSg1 SINE Alu -21 288 1 223 354 0 0 chr10 28987479 28987558 -116601730 + CT-rich Low_complexity Low_complexity 3 81 0 26 30 0 0 chr10 28987703 28987736 -116601552 + AT_rich Low_complexity Low_complexity 1 33 0 25 31 0 0 chr10 28987897 28987929 -116601359 + AT_rich Low_complexity Low_complexity 1 32 0 2178 121 3 6 chr10 28987929 28988242 -116601046 - AluSx SINE Alu 0 312 1 192 77 0 0 chr10 28988586 28988612 -116600676 + (TTTTC)n Simple_repeat Simple_repeat 4 29 0 808 187 0 0 chr10 28988886 28989009 -116600279 + FLAM_C SINE Alu 2 124 -19 1530 180 10 20 chr10 28989024 28989318 -116599970 + AluJo SINE Alu 1 291 -21 387 291 34 29 chr10 28990159 28990334 -116598954 - MLT1K LTR MaLR -23 565 390 251 342 52 19 chr10 28990526 28990681 -116598607 - MLT1K LTR MaLR -382 206 47 2167 125 50 36 chr10 28990759 28991118 -116598170 + THE1B LTR MaLR 1 364 0 2433 76 0 0 chr10 28992299 28992589 -116596699 - AluSc SINE Alu -19 290 1 931 67 0 8 chr10 28992589 28992709 -116596579 - AluSx SINE Alu 0 310 192 839 85 0 0 chr10 28992713 28992819 -116596469 - AluSx SINE Alu -174 138 33 1738 156 17 10 chr10 28993090 28993378 -116595910 + AluJb SINE Alu 5 294 -18 1976 129 50 0 chr10 28993652 28993932 -116595356 - AluSx SINE Alu -18 294 1 1172 216 6 3 chr10 28994197 28994229 -116595059 + L1MB1 LINE L1 5921 5951 -238 2090 121 0 0 chr10 28994229 28994538 -116594750 + AluSx SINE Alu 1 309 0 1172 216 6 3 chr10 28994538 28994749 -116594539 + L1MB1 LINE L1 5951 6155 -34 998 164 0 62 chr10 28995754 28995931 -116593357 - FRAM SINE Alu 0 166 1 2133 109 3 7 chr10 28996997 28997291 -116591997 - AluSc SINE Alu -14 295 3 802 161 0 86 chr10 28997732 28997906 -116591382 + L1MA10 LINE L1 6137 6295 -39 2184 114 7 0 chr10 28997924 28998223 -116591065 - AluSx SINE Alu -11 301 1 5588 118 30 11 chr10 28998229 28999090 -116590198 - L1PA15 LINE L1 0 6165 5288 2541 126 19 0 chr10 28999090 28999462 -116589826 - L1PA16 LINE L1 -8 6158 5780 233 188 0 0 chr10 28999462 28999505 -116589783 + L1MA10 LINE L1 6282 6324 -10 225 0 0 0 chr10 28999547 28999572 -116589716 + (A)n Simple_repeat Simple_repeat 1 25 0 263 250 15 0 chr10 29001488 29001556 -116587732 + (TG)n Simple_repeat Simple_repeat 2 70 0 1595 111 4 8 chr10 29002105 29002391 -116586897 - AluSq SINE Alu 0 313 77 477 248 14 86 chr10 29003250 29003460 -116585828 + L2 LINE L2 3119 3313 0 2352 122 73 20 chr10 29004075 29004419 -116584869 + THE1B LTR MaLR 1 362 -2 1062 280 49 107 chr10 29005037 29005126 -116584162 + L1MEc LINE L1 20 113 -6283 1867 129 96 0 chr10 29005126 29005406 -116583882 + AluJb SINE Alu 1 307 -5 1062 280 49 107 chr10 29005406 29006231 -116583057 + L1MEc LINE L1 113 881 -5515 1568 238 70 12 chr10 29006235 29006634 -116582654 + MLT1F LTR MaLR 7 428 -114 1257 90 7 0 chr10 29006638 29006793 -116582495 + AluSx SINE Alu 1 156 -156 2108 89 0 38 chr10 29006794 29007085 -116582203 + AluSx SINE Alu 21 300 -12 623 166 182 53 chr10 29007326 29007573 -116581715 + L1MC5 LINE L1 7319 7597 -364 4207 149 23 17 chr10 29007584 29008288 -116581000 - L1MC1 LINE L1 0 6333 5626 823 363 20 25 chr10 29008552 29008995 -116580293 - L1M3a LINE L1 -5503 452 12 3486 152 90 4 chr10 29009001 29010093 -116579195 - L1MCa LINE L1 -4166 2478 1193 2347 174 4 123 chr10 29010095 29010631 -116578657 - MER70A LTR ERVL 0 472 1 15761 150 26 40 chr10 29010654 29011946 -116577342 - MER70A-int LTR ERVL -10 5013 3705 2603 101 28 17 chr10 29011946 29012303 -116576985 + THE1B LTR MaLR 1 361 -3 15761 150 26 40 chr10 29012303 29013809 -116575479 - MER70A-int LTR ERVL -1318 3705 2252 619 168 10 0 chr10 29013801 29013902 -116575386 - MER70-int LTR ERVL -1678 3345 3244 * 665 280 86 106 chr10 29013936 29014055 -116575233 - L1MCa LINE L1 -5813 729 609 1808 119 8 0 chr10 29014055 29014306 -116574982 + AluSx SINE Alu 57 309 -3 665 280 86 106 chr10 29014306 29014662 -116574626 - L1MCa LINE L1 -5933 609 272 2219 79 7 20 chr10 29014662 29014965 -116574323 - AluSx SINE Alu -13 299 1 665 280 86 106 chr10 29014965 29015232 -116574056 - L1MCa LINE L1 -6270 272 1 1848 140 13 23 chr10 29015588 29015896 -116573392 + AluJo SINE Alu 6 310 -2 1143 244 88 34 chr10 29015933 29016433 -116572855 + L1ME4a LINE L1 4696 5222 -924 31 68 0 0 chr10 29016630 29016689 -116572599 + AT_rich Low_complexity Low_complexity 1 59 0 1812 116 8 4 chr10 29016736 29016994 -116572294 - AluSx SINE Alu -14 298 40 195 42 0 0 chr10 29018605 29018629 -116570659 + (A)n Simple_repeat Simple_repeat 1 24 0 729 191 0 107 chr10 29019462 29019630 -116569658 - Tigger3(Golem) DNA MER2_type -2876 153 4 377 287 135 33 chr10 29019641 29020003 -116569285 + L1ME4a LINE L1 5384 5782 -339 356 243 39 88 chr10 29020069 29020250 -116569038 + L1ME4a LINE L1 5923 6094 -27 400 157 0 60 chr10 29020488 29020571 -116568717 - Tigger3b DNA MER2_type -380 852 775 203 55 109 55 chr10 29020575 29020630 -116568658 + (TTAAA)n Simple_repeat Simple_repeat 3 60 0 1038 78 30 104 chr10 29020634 29020852 -116568436 - Tigger3b DNA MER2_type -2241 788 592 2361 68 0 10 chr10 29020852 29021179 -116568109 + AluY SINE Alu 1 311 0 1038 78 30 104 chr10 29021179 29021229 -116568059 - Tigger3b DNA MER2_type -2437 592 540 1185 128 11 16 chr10 29021229 29021416 -116567872 + AluSg/x SINE Alu 122 307 -5 2039 119 92 0 chr10 29021417 29021753 -116567535 - Tigger3b DNA MER2_type -703 528 162 * 3796 135 25 8 chr10 29021751 29022364 -116566924 + Tigger3b DNA MER2_type 609 1231 0 244 0 0 0 chr10 29023852 29023879 -116565409 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2098 95 29 41 chr10 29023879 29024194 -116565094 - AluSx SINE Alu 0 338 1 371 233 12 12 chr10 29024420 29024506 -116564782 + Tigger7 DNA MER2_type 2401 2486 -1 2386 85 0 0 chr10 29024820 29025115 -116564173 + AluSx SINE Alu 1 295 -17 385 324 70 14 chr10 29026053 29026195 -116563093 - MER5B DNA MER1_type -5 173 24 385 289 51 51 chr10 29026661 29026817 -116562471 + L1MB4 LINE L1 5 160 -6382 1385 77 0 0 chr10 29027024 29027194 -116562094 + AluY SINE Alu 129 298 -13 1841 166 3 17 chr10 29027241 29027543 -116561745 + AluJo SINE Alu 11 308 -4 7624 231 49 15 chr10 29027546 29028004 -116561284 + L1MB4 LINE L1 2551 2992 -3652 2151 167 0 0 chr10 29028004 29028316 -116560972 + AluSx SINE Alu 1 312 0 7624 231 49 15 chr10 29028316 29028863 -116560425 + L1MB4 LINE L1 2992 3519 -3125 1502 226 80 0 chr10 29028863 29029199 -116560089 - MLT1A1 LTR MaLR 0 365 3 7624 231 49 15 chr10 29029199 29030772 -116558516 + L1MB4 LINE L1 3519 5218 -1426 1382 189 37 40 chr10 29030773 29031153 -116558135 + L1MB4 LINE L1 6297 6675 -3 1404 174 0 0 chr10 29031624 29031843 -116557445 - AluJb SINE Alu -93 219 1 716 303 65 3 chr10 29034385 29034722 -116554566 - L1MC4a LINE L1 -1961 5847 5490 1187 175 68 115 chr10 29035051 29035434 -116553854 + MLT1A1 LTR MaLR 1 365 0 23 0 0 0 chr10 29035446 29035469 -116553819 + AT_rich Low_complexity Low_complexity 1 23 0 460 314 135 16 chr10 29035604 29035923 -116553365 + MLT1J2 LTR MaLR 65 421 -29 2187 124 0 3 chr10 29036473 29036772 -116552516 + AluSx SINE Alu 1 298 -14 976 238 75 14 chr10 29036946 29037181 -116552107 - MER114 LTR ERV -5 643 424 1832 156 11 0 chr10 29037181 29037463 -116551825 + AluSq SINE Alu 1 285 -28 976 238 75 14 chr10 29037463 29037656 -116551632 - MER114 LTR ERV -224 424 189 41235 47 5 1 chr10 29037665 29043785 -116545503 + L1PA4 LINE L1 11 6155 0 1417 207 12 61 chr10 29043798 29044208 -116545080 + MLT2C1 LTR ERVL 1 390 -7 249 57 0 0 chr10 29044209 29044244 -116545044 + (TA)n Simple_repeat Simple_repeat 2 36 0 5687 246 50 20 chr10 29044265 29046398 -116542890 + ERVL-C1-C1 LTR ERVL 25 2292 -3472 12893 186 66 24 chr10 29046400 29046754 -116542534 + ERVL-C1-C1 LTR ERVL 2465 2803 -2961 774 164 0 16 chr10 29046754 29046882 -116542406 + AluJo/FLAM SINE Alu 1 126 -176 1974 125 7 10 chr10 29046885 29047182 -116542106 + AluSx SINE Alu 1 296 -16 12893 186 66 24 chr10 29047182 29047380 -116541908 + ERVL-C1-C1 LTR ERVL 2804 2992 -2772 273 29 0 0 chr10 29047380 29047414 -116541874 + (TTG)n Simple_repeat Simple_repeat 1 34 0 2098 113 7 0 chr10 29047418 29047700 -116541588 - AluSp SINE Alu -29 284 1 12893 186 66 24 chr10 29047700 29049767 -116539521 + ERVL-C1-C1 LTR ERVL 2994 5222 -542 1232 86 48 32 chr10 29049767 29049954 -116539334 + MER30B DNA MER1_type 1 190 0 12893 186 66 24 chr10 29049954 29050137 -116539151 + ERVL-C1-C1 LTR ERVL 5222 5396 -368 550 239 58 0 chr10 29050176 29050331 -116538957 + ERVL-C1-C1 LTR ERVL 5522 5685 -79 9274 29 8 1 chr10 29050337 29051533 -116537755 + L1P LINE L1 2575 3778 -2368 415 110 0 14 chr10 29051546 29051619 -116537669 + ERVL-C1-C1 LTR ERVL 5686 5757 -7 1468 149 13 112 chr10 29051629 29052012 -116537276 + MLT2C1 LTR ERVL 5 349 -48 186 133 0 0 chr10 29052013 29052043 -116537245 + (TCCC)n Simple_repeat Simple_repeat 3 32 0 372 22 0 0 chr10 29052047 29052092 -116537196 + (TG)n Simple_repeat Simple_repeat 2 46 0 376 246 62 15 chr10 29052151 29052346 -116536942 - MER114 LTR ERV -444 204 1 499 228 36 55 chr10 29052426 29052844 -116536444 + L1ME LINE L1 1260 1668 -4716 2995 261 50 16 chr10 29052854 29054087 -116535201 + L1ME LINE L1 3126 4399 -1983 2347 264 63 22 chr10 29054088 29055044 -116534244 + L1ME LINE L1 4455 5457 -925 2140 73 4 0 chr10 29055044 29055303 -116533985 - AluY SINE Alu -17 294 35 2347 264 63 22 chr10 29055303 29055365 -116533923 + L1ME LINE L1 5457 5515 -867 1265 134 40 102 chr10 29055388 29055663 -116533625 + AluJo SINE Alu 39 296 -16 600 206 111 10 chr10 29055666 29055865 -116533423 + L1ME LINE L1 5538 5756 -642 4840 200 62 26 chr10 29055896 29056381 -116532907 + MER45R DNA AcHobo 52 518 -1063 2288 94 7 0 chr10 29056381 29056679 -116532609 + AluSx SINE Alu 1 300 -12 4840 200 62 26 chr10 29056679 29057439 -116531849 + MER45R DNA AcHobo 518 1341 -240 779 193 75 53 chr10 29057604 29057721 -116531567 + L1M4 LINE L1 4143 4256 -1890 195 42 0 0 chr10 29057721 29057745 -116531543 + (CA)n Simple_repeat Simple_repeat 1 24 0 779 193 75 53 chr10 29057745 29057855 -116531433 + L1M4 LINE L1 4256 4375 -1771 227 266 19 39 chr10 29057854 29058008 -116531280 + L1M4 LINE L1 2282 2432 -3714 * 277 232 43 0 chr10 29059067 29059136 -116530152 + L2 LINE L2 3242 3313 0 612 233 16 21 chr10 29059272 29059465 -116529823 - HAL1b LINE L1 -551 797 606 365 238 48 60 chr10 29059547 29059715 -116529573 - HAL1b LINE L1 -872 476 311 315 313 26 26 chr10 29059840 29059955 -116529333 - HAL1b LINE L1 -1163 185 71 1296 157 18 44 chr10 29060289 29060518 -116528770 + AluJo SINE Alu 21 243 -69 537 281 76 25 chr10 29060556 29060794 -116528494 + HAL1 LINE L1 273 522 -1985 211 247 26 0 chr10 29060842 29060919 -116528369 + (TTA)n Simple_repeat Simple_repeat 1 79 0 684 133 0 0 chr10 29060933 29061031 -116528257 - AluJ/FLAM SINE Alu -214 98 1 209 56 0 28 chr10 29061244 29061280 -116528008 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 1475 182 6 20 chr10 29061286 29061392 -116527896 + L1MA4 LINE L1 5963 6069 -231 1240 152 190 8 chr10 29061392 29061655 -116527633 + AluYa5 SINE Alu 1 311 0 1475 182 6 20 chr10 29061655 29061889 -116527399 + L1MA4 LINE L1 6069 6298 -2 332 329 13 58 chr10 29062031 29062186 -116527102 - HAL1 LINE L1 -891 1616 1469 303 242 0 55 chr10 29062178 29062269 -116527019 - L1MC4 LINE L1 -1343 6699 6614 * 702 98 17 75 chr10 29062279 29062453 -116526835 + (TATATG)n Simple_repeat Simple_repeat 5 168 0 311 239 57 34 chr10 29062457 29062545 -116526743 + L1MC4 LINE L1 6614 6703 -1339 291 170 18 74 chr10 29062558 29063043 -116526245 + (CATA)n Simple_repeat Simple_repeat 1 457 0 383 231 61 0 chr10 29063047 29063194 -116526094 + (TA)n Simple_repeat Simple_repeat 2 157 0 701 139 98 0 chr10 29063225 29063347 -116525941 - AluSq/x SINE Alu -178 134 1 2263 94 40 0 chr10 29063391 29063690 -116525598 + AluSq SINE Alu 1 311 -2 894 177 26 151 chr10 29063933 29063992 -116525296 - MLT2B3 LTR ERVL -8 546 481 2068 116 36 13 chr10 29063992 29064294 -116524994 + AluSx SINE Alu 1 309 -3 894 177 26 151 chr10 29064294 29064545 -116524743 - MLT2B3 LTR ERVL -73 481 275 363 44 0 0 chr10 29065747 29065792 -116523496 + (TTCC)n Simple_repeat Simple_repeat 2 46 0 582 163 12 25 chr10 29065870 29066030 -116523258 + CT-rich Low_complexity Low_complexity 4 161 0 912 174 12 8 chr10 29066136 29066384 -116522904 + CT-rich Low_complexity Low_complexity 1 249 0 1457 204 19 41 chr10 29066390 29066709 -116522579 - AluJo SINE Alu 0 312 1 192 313 75 62 chr10 29067631 29067711 -116521577 + L2 LINE L2 3138 3218 -54 852 152 0 41 chr10 29067871 29068016 -116521272 + FLAM_C SINE Alu 1 139 -4 537 350 62 0 chr10 29069131 29069374 -116519914 + MIR SINE MIR 5 262 0 239 289 141 4 chr10 29069466 29069708 -116519580 - L1 LINE L1 -2191 3955 3681 447 246 164 30 chr10 29069906 29070466 -116518822 - L1 LINE L1 -2638 3508 2874 1615 159 3 53 chr10 29070526 29070828 -116518460 - AluJo SINE Alu -25 287 1 357 366 54 9 chr10 29071170 29071394 -116517894 - HAL1 LINE L1 -761 1746 1513 2074 117 14 10 chr10 29071467 29071757 -116517531 - AluSx SINE Alu -21 291 1 6308 128 20 27 chr10 29071769 29072613 -116516675 - L1MA3 LINE L1 0 6305 5456 2074 153 0 13 chr10 29072613 29072926 -116516362 - AluSx SINE Alu -3 309 1 6308 128 20 27 chr10 29072926 29074053 -116515235 - L1MA3 LINE L1 -849 5456 4354 571 101 25 0 chr10 29074061 29074140 -116515148 + AluSg/x SINE Alu 209 289 -23 26 30 0 0 chr10 29074758 29074791 -116514497 + AT_rich Low_complexity Low_complexity 1 33 0 1558 154 47 25 chr10 29075044 29075323 -116513965 + AluJo SINE Alu 5 289 -23 315 49 0 0 chr10 29075324 29075365 -116513923 + (CA)n Simple_repeat Simple_repeat 2 42 0 1513 239 5 46 chr10 29075670 29076084 -116513204 + MLT2C1 LTR ERVL 1 397 0 254 253 214 32 chr10 29076149 29076303 -116512985 - L1MC4a LINE L1 -1894 5914 5733 525 236 89 130 chr10 29076320 29077121 -116512167 - HAL1 LINE L1 -924 1583 816 2624 164 45 24 chr10 29077432 29077939 -116511349 - L1MB3 LINE L1 -12 6171 5654 262 250 20 60 chr10 29078240 29078340 -116510948 + MIR SINE MIR 7 102 -160 252 86 0 0 chr10 29079263 29079298 -116509990 + (TG)n Simple_repeat Simple_repeat 2 36 0 196 312 54 43 chr10 29079755 29079848 -116509440 - MIR3 SINE MIR -6 202 109 4308 139 12 145 chr10 29080064 29081105 -116508183 - MER4D LTR ERV1 0 903 1 2094 76 0 4 chr10 29081274 29081560 -116507728 + AluY SINE Alu 40 324 0 1957 133 66 36 chr10 29081562 29081924 -116507364 - THE1C LTR MaLR -2 373 1 210 71 0 0 chr10 29082046 29082074 -116507214 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 364 218 38 16 chr10 29082325 29082455 -116506833 + MIR SINE MIR 41 176 -63 2236 174 31 7 chr10 29082519 29082924 -116506364 - MSTA LTR MaLR 0 428 21 1603 198 47 0 chr10 29083270 29083589 -116505699 + MER58B DNA MER1_type 6 339 -2 805 265 57 5 chr10 29083636 29083847 -116505441 - MIR SINE MIR -10 252 31 3599 64 2 9 chr10 29084694 29085145 -116504143 + LTR7 LTR ERV1 1 448 -2 2995 112 4 32 chr10 29085147 29085619 -116503669 + HERVH LTR ERV1 1 459 -7254 3977 222 19 52 chr10 29085677 29087392 -116501896 + HERVH LTR ERV1 800 2265 -4389 * 18687 70 9 8 chr10 29087389 29089871 -116499417 + HERVH LTR ERV1 5229 7713 0 3641 58 2 9 chr10 29089871 29090322 -116498966 + LTR7 LTR ERV1 1 448 -2 197 339 0 0 chr10 29090931 29090987 -116498301 - L2 LINE L2 -43 3270 3215 1539 284 52 36 chr10 29091440 29091523 -116497765 - L2 LINE L2 -133 3180 3100 568 270 40 23 chr10 29091523 29091697 -116497591 - MER5B DNA MER1_type 0 178 2 1539 284 52 36 chr10 29091697 29092445 -116496843 - L2 LINE L2 -213 3100 2328 2195 114 0 10 chr10 29093892 29094191 -116495097 - AluSx SINE Alu -16 296 1 515 237 25 0 chr10 29094406 29094524 -116494764 - MIR SINE MIR -72 190 70 1995 116 0 69 chr10 29095866 29096184 -116493104 + AluSx SINE Alu 1 296 -16 1172 199 0 0 chr10 29096597 29096808 -116492480 - L1MB1 LINE L1 -34 6155 5945 2066 124 0 0 chr10 29096808 29097117 -116492171 - AluSx SINE Alu 0 309 1 25 0 0 0 chr10 29097413 29097438 -116491850 + AT_rich Low_complexity Low_complexity 1 25 0 2309 103 3 0 chr10 29097635 29097935 -116491353 + AluSx SINE Alu 1 301 -11 1386 175 49 8 chr10 29097942 29098205 -116491083 + AluJb SINE Alu 6 279 -33 1323 80 6 0 chr10 29098261 29098424 -116490864 + AluSp SINE Alu 11 174 -139 2088 131 0 16 chr10 29098544 29098850 -116490438 - AluJb SINE Alu 0 312 12 28 0 0 0 chr10 29099122 29099150 -116490138 + AT_rich Low_complexity Low_complexity 1 28 0 225 222 30 61 chr10 29099259 29099358 -116489930 + L1MC4 LINE L1 7947 8042 0 760 96 0 0 chr10 29099823 29099917 -116489371 + AluS SINE Alu 3 96 -216 674 270 42 20 chr10 29099931 29100260 -116489028 - L1MCc LINE L1 -4891 1532 1341 595 231 84 35 chr10 29100266 29100551 -116488737 + L1ME3A LINE L1 5153 5452 -710 314 164 60 0 chr10 29100576 29100643 -116488645 + MER115 DNA AcHobo 583 653 -40 258 125 0 42 chr10 29100676 29100724 -116488564 - L1MC4 LINE L1 -5 8037 7992 1041 278 118 25 chr10 29100742 29101120 -116488168 + L1ME3A LINE L1 5464 5914 -256 2288 102 0 0 chr10 29101120 29101413 -116487875 + AluSc SINE Alu 1 293 -16 1041 278 118 25 chr10 29101413 29101602 -116487686 + L1ME3A LINE L1 5914 6084 -86 1217 76 0 0 chr10 29101795 29101939 -116487349 - AluSc SINE Alu -143 166 23 1056 100 0 0 chr10 29101939 29102079 -116487209 + AluSg/x SINE Alu 171 310 0 22 56 0 0 chr10 29102571 29102607 -116486681 + AT_rich Low_complexity Low_complexity 1 36 0 24 0 0 0 chr10 29102639 29102663 -116486625 + AT_rich Low_complexity Low_complexity 1 24 0 2210 232 45 57 chr10 29103327 29103888 -116485400 - MLT2B3 LTR ERVL 0 554 1 1442 165 61 61 chr10 29103909 29104206 -116485082 - AluJo SINE Alu -15 297 1 256 289 0 78 chr10 29104206 29104348 -116484940 + MIR SINE MIR 65 195 -67 2110 118 6 13 chr10 29104355 29104668 -116484620 + AluSx SINE Alu 1 311 -1 1172 214 24 0 chr10 29105492 29105702 -116483586 - MER20 DNA MER1_type -4 215 1 265 299 104 28 chr10 29105908 29106052 -116483236 - MIR SINE MIR -10 252 98 916 119 8 0 chr10 29106052 29106178 -116483110 + AluSq/x SINE Alu 1 127 -185 1921 162 0 6 chr10 29106189 29106503 -116482785 + AluSx SINE Alu 1 312 0 700 149 85 14 chr10 29107127 29107268 -116482020 - L1ME3A LINE L1 -12 6158 6008 437 277 96 30 chr10 29107750 29107916 -116481372 + MER5B DNA MER1_type 2 178 0 378 322 106 24 chr10 29108413 29108621 -116480667 - MIR SINE MIR -1 261 37 2247 104 7 0 chr10 29108799 29109086 -116480202 + AluSg SINE Alu 9 297 -13 266 225 25 25 chr10 29109335 29109415 -116479873 - MLT1K LTR MaLR 0 588 509 825 272 126 60 chr10 29109429 29109959 -116479329 - MER34B LTR ERV1 0 565 1 35 0 0 0 chr10 29110021 29110056 -116479232 + AT_rich Low_complexity Low_complexity 1 35 0 4905 109 16 3 chr10 29110056 29110735 -116478553 - L1PB1 LINE L1 0 6151 5464 25 31 0 0 chr10 29110842 29110874 -116478414 + AT_rich Low_complexity Low_complexity 1 32 0 2692 88 38 0 chr10 29110962 29111304 -116477984 - THE1A LTR MaLR 0 355 1 719 359 83 16 chr10 29111512 29112003 -116477285 - MLT1K LTR MaLR -62 526 3 2395 185 54 22 chr10 29112989 29113540 -116475748 - LTR27 LTR ERV1 -141 685 3 462 269 110 0 chr10 29113774 29113919 -116475369 + L1MDa LINE L1 1001 1161 -5379 1348 185 31 10 chr10 29113919 29114209 -116475079 - LTR54 LTR ERV1 0 510 239 4488 140 11 3 chr10 29114215 29114915 -116474373 - L1MA4A LINE L1 -4 6299 5594 5065 138 25 89 chr10 29114915 29115067 -116474221 + L1M1 LINE L1 4250 4410 -1893 195 42 0 0 chr10 29115067 29115091 -116474197 + (TAAAA)n Simple_repeat Simple_repeat 4 27 0 5065 138 25 89 chr10 29115091 29116236 -116473052 + L1M1 LINE L1 4410 5438 -865 189 0 0 0 chr10 29116236 29116257 -116473031 + (CA)n Simple_repeat Simple_repeat 2 22 0 5065 138 25 89 chr10 29116257 29116390 -116472898 + L1M1 LINE L1 5438 5578 -725 899 213 72 5 chr10 29116442 29116663 -116472625 - LTR54 LTR ERV1 -274 236 1 825 180 0 0 chr10 29116681 29116803 -116472485 + FAM SINE Alu 10 131 -54 1979 214 48 67 chr10 29116805 29117465 -116471823 + L1MDa LINE L1 1300 1947 -4593 304 258 97 32 chr10 29117513 29117590 -116471698 + L1MDa LINE L1 2085 2156 -4384 5196 103 7 16 chr10 29117590 29118287 -116471001 + LTR8 LTR ERV1 1 691 0 304 258 97 32 chr10 29118287 29118364 -116470924 + L1MDa LINE L1 2156 2249 -4291 * 1578 249 100 16 chr10 29118349 29118988 -116470300 + L1MDa LINE L1 3306 3998 -2542 680 212 38 52 chr10 29118981 29119193 -116470095 + L1MDa LINE L1 3868 4076 -2464 * 2346 68 0 42 chr10 29119200 29119509 -116469779 + AluY SINE Alu 1 296 -15 5642 174 28 20 chr10 29119513 29120868 -116468420 - L1MC1 LINE L1 -122 6211 4837 995 184 12 0 chr10 29120974 29121137 -116468151 + FAM SINE Alu 1 165 -10 2377 75 7 0 chr10 29121145 29121438 -116467850 + AluY SINE Alu 1 295 -16 436 322 72 10 chr10 29121566 29121774 -116467514 - LTR33 LTR ERVL -4 517 297 683 298 44 29 chr10 29121836 29122111 -116467177 - ERVL LTR ERVL -984 4780 4502 727 209 0 0 chr10 29122417 29122555 -116466733 + FLAM_A SINE Alu 2 139 0 269 297 40 0 chr10 29123582 29123656 -116465632 - L2 LINE L2 -999 2315 2239 988 155 44 33 chr10 29123656 29123837 -116465451 + AluJo SINE Alu 38 220 -92 283 173 0 0 chr10 29123837 29123889 -116465399 + FAM SINE Alu 127 178 -1 1839 194 66 50 chr10 29124052 29124552 -116464736 - Charlie1b DNA MER1_type 0 523 16 932 262 142 16 chr10 29124725 29125042 -116464246 - L2 LINE L2 0 3313 2957 301 224 0 0 chr10 29125160 29125209 -116464079 - L2 LINE L2 -20 3252 3204 222 281 126 60 chr10 29125491 29125658 -116463630 - MIR SINE MIR -65 197 20 357 226 73 48 chr10 29126827 29126951 -116462337 - MIR SINE MIR -86 176 50 19602 32 3 0 chr10 29127222 29130352 -116458936 + L1PA4 LINE L1 3013 6147 -8 405 0 0 0 chr10 29130427 29130472 -116458816 + (CA)n Simple_repeat Simple_repeat 1 45 0 1165 119 17 0 chr10 29131087 29131263 -116458025 + L1P LINE L1 461 639 -5507 9186 25 6 1 chr10 29131271 29133137 -116456151 + L1PA4 LINE L1 4281 6154 -1 2499 190 47 6 chr10 29133180 29133674 -116455614 + L1MCa LINE L1 27 540 -5886 701 126 8 8 chr10 29133672 29133799 -116455489 + L1MCa LINE L1 1880 2006 -4420 * 2282 62 0 0 chr10 29135019 29135317 -116453971 - AluSc SINE Alu 0 308 11 270 240 67 0 chr10 29135608 29135683 -116453605 - MER116 DNA Mariner 0 80 1 1818 163 7 7 chr10 29135802 29136091 -116453197 - AluJo SINE Alu -23 289 1 549 250 8 0 chr10 29136103 29136227 -116453061 - FLAM_C SINE Alu -8 125 1 331 331 104 0 chr10 29136731 29136885 -116452403 + MIR3 SINE MIR 5 174 -34 1439 165 97 25 chr10 29137227 29137506 -116451782 + AluJo SINE Alu 2 300 -12 256 388 24 24 chr10 29139433 29139683 -116449605 + L2 LINE L2 2909 3158 -114 343 304 20 20 chr10 29139702 29139804 -116449484 - L2 LINE L2 -16 3256 3155 188 294 183 32 chr10 29140058 29140184 -116449104 + MIR3 SINE MIR 7 151 -57 1461 192 175 83 chr10 29140313 29140683 -116448605 - L1MC4 LINE L1 -1 8041 7706 1919 137 7 14 chr10 29140683 29140976 -116448312 - AluSx SINE Alu -21 291 1 1461 192 175 83 chr10 29140976 29141425 -116447863 - L1MC4 LINE L1 -336 7706 7071 794 172 0 8 chr10 29141425 29141559 -116447729 - FLAM_A SINE Alu 0 133 1 1461 192 175 83 chr10 29141559 29141610 -116447678 - L1MC4 LINE L1 -971 7071 7026 28 0 0 0 chr10 29141750 29141778 -116447510 + AT_rich Low_complexity Low_complexity 1 28 0 1860 153 7 3 chr10 29141778 29142072 -116447216 - AluSx SINE Alu -13 299 5 2204 113 0 10 chr10 29142503 29142805 -116446483 - AluSx SINE Alu -13 299 1 320 270 83 83 chr10 29143974 29144204 -116445084 + HAL1b LINE L1 15 244 -1104 1747 154 29 10 chr10 29144229 29144535 -116444753 - AluJo SINE Alu 0 312 1 983 185 6 0 chr10 29145058 29145215 -116444073 + AluJb SINE Alu 137 294 -18 353 263 142 76 chr10 29145439 29145728 -116443560 - L1 LINE L1 -2945 3201 2894 2208 119 0 6 chr10 29145744 29146055 -116443233 + AluSx SINE Alu 1 309 -3 2288 104 0 0 chr10 29146550 29146849 -116442439 + AluSx SINE Alu 1 299 -13 2176 212 40 90 chr10 29147166 29148534 -116440754 - L1ME1 LINE L1 -25 6141 4848 2034 234 177 12 chr10 29148577 29149352 -116439936 + L1M4 LINE L1 3797 4699 -1447 1008 206 32 12 chr10 29149359 29149612 -116439676 - L1MEc LINE L1 -2096 4286 4029 * 2035 247 58 33 chr10 29149610 29150105 -116439183 - L1 LINE L1 -2649 3733 3207 2230 125 0 0 chr10 29150105 29150416 -116438872 + AluSx SINE Alu 2 312 0 2035 247 58 33 chr10 29150416 29150746 -116438542 - L1 LINE L1 -3175 3207 2887 3356 85 17 4 chr10 29150852 29151324 -116437964 + L1PB1 LINE L1 5674 6151 0 250 224 52 95 chr10 29151381 29151497 -116437791 + MER21B LTR ERV1 356 466 -397 189 0 0 0 chr10 29151616 29151637 -116437651 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 1145 234 81 11 chr10 29151658 29152686 -116436602 - L1MEc LINE L1 -2667 3715 2190 949 258 48 0 chr10 29152736 29153070 -116436218 - L1MEc LINE L1 -4999 1564 1215 613 157 0 91 chr10 29153073 29153271 -116436017 - AluJ SINE Alu -3 309 130 1146 108 0 0 chr10 29153287 29153445 -116435843 + AluY SINE Alu 2 159 -152 2116 75 0 4 chr10 29153588 29153856 -116435432 + AluY SINE Alu 37 303 -8 778 180 0 0 chr10 29153856 29153984 -116435304 - AluJ SINE Alu -174 128 1 343 231 19 10 chr10 29154037 29154141 -116435147 - L1MEc LINE L1 -5461 1102 998 255 217 60 12 chr10 29154198 29154281 -116435007 - Charlie7 DNA MER1_type -2221 391 305 561 231 71 38 chr10 29154282 29154494 -116434794 + Charlie7 DNA MER1_type 381 599 -2013 22 35 0 0 chr10 29156650 29156679 -116432609 + AT_rich Low_complexity Low_complexity 1 29 0 235 294 41 0 chr10 29157241 29157427 -116431861 + (TCTA)n Simple_repeat Simple_repeat 1 193 0 341 312 229 11 chr10 29158363 29158805 -116430483 - L1ME LINE L1 -358 5804 5267 26 0 0 0 chr10 29160848 29160874 -116428414 + AT_rich Low_complexity Low_complexity 1 26 0 250 222 14 28 chr10 29161296 29161356 -116427932 - MER58A DNA MER1_type 0 224 166 434 156 13 13 chr10 29161356 29161433 -116427855 - MER58A DNA MER1_type 0 112 36 227 336 67 0 chr10 29161558 29161662 -116427626 - L2 LINE L2 -10 3303 3193 375 298 120 13 chr10 29161833 29161991 -116427297 + MER5B DNA MER1_type 1 175 -3 515 247 178 20 chr10 29164030 29164176 -116425112 + MER5A DNA MER1_type 18 186 -3 1026 178 104 0 chr10 29164184 29164386 -116424902 + MER58A DNA MER1_type 1 223 -1 209 289 0 0 chr10 29164458 29164510 -116424778 - MER5B DNA MER1_type -124 54 3 874 277 165 39 chr10 29164697 29164911 -116424377 - L2 LINE L2 -59 3254 3068 1368 100 91 0 chr10 29164911 29165121 -116424167 - MER30 DNA MER1_type 0 230 2 874 277 165 39 chr10 29165121 29165558 -116423730 - L2 LINE L2 -245 3068 2687 2462 49 10 0 chr10 29165558 29165846 -116423442 + AluY SINE Alu 4 294 -17 874 277 165 39 chr10 29165846 29166052 -116423236 - L2 LINE L2 -626 2687 2264 1093 166 78 5 chr10 29166108 29166313 -116422975 + AluJb SINE Alu 87 306 -6 2371 288 112 11 chr10 29166319 29167245 -116422043 - L2 LINE L2 -1171 2143 1124 810 293 38 0 chr10 29169910 29170149 -116419139 - MIR SINE MIR 0 262 15 21 0 0 0 chr10 29171097 29171118 -116418170 + AT_rich Low_complexity Low_complexity 1 21 0 506 310 137 51 chr10 29171573 29172025 -116417263 + MLT1K LTR MaLR 80 570 -18 303 294 46 18 chr10 29172112 29172221 -116417067 - HAL1b LINE L1 -54 1294 1183 372 279 90 75 chr10 29172382 29172474 -116416814 - L1MC4a LINE L1 -158 6027 5938 1769 164 13 13 chr10 29172474 29172785 -116416503 - AluJo SINE Alu -1 311 1 372 279 90 75 chr10 29172785 29173158 -116416130 - L1MC4a LINE L1 -247 5938 5555 622 138 28 0 chr10 29173202 29173311 -116415977 - L1PA16 LINE L1 -4 6162 6051 2327 99 0 0 chr10 29173324 29173616 -116415672 - AluSx SINE Alu -20 292 1 323 302 116 13 chr10 29173667 29173841 -116415447 - L1MC4a LINE L1 -780 5430 5239 21 36 0 0 chr10 29173923 29173951 -116415337 + AT_rich Low_complexity Low_complexity 1 28 0 425 220 93 0 chr10 29174162 29174280 -116415008 + Charlie4 DNA MER1_type 1821 1949 -12 243 242 128 71 chr10 29174672 29174883 -116414405 - L1 LINE L1 -1619 4591 4369 270 246 0 0 chr10 29175049 29175106 -116414182 - L1ME1 LINE L1 -53 6113 6057 1427 179 21 39 chr10 29175106 29175391 -116413897 + AluJo SINE Alu 1 280 -32 255 270 81 45 chr10 29175409 29175520 -116413768 - L1ME1 LINE L1 -96 6070 5956 1248 193 34 0 chr10 29175674 29175913 -116413375 - AluJo SINE Alu -21 291 45 1613 143 29 0 chr10 29175938 29176176 -116413112 + AluSq SINE Alu 3 247 -66 2232 57 0 11 chr10 29176286 29176568 -116412720 - AluY SINE Alu 0 311 33 834 129 22 22 chr10 29176687 29176826 -116412462 - AluJb SINE Alu -173 139 1 310 307 96 60 chr10 29176881 29177132 -116412156 - L1MC4a LINE L1 -1008 5202 4943 797 252 145 29 chr10 29177149 29177679 -116411609 - L2 LINE L2 -1 3312 2720 5474 121 50 8 chr10 29177679 29178648 -116410640 + L1MA4A LINE L1 5290 6298 -5 309 136 51 0 chr10 29178644 29178703 -116410585 + L1MA7 LINE L1 6140 6201 -90 * 679 274 129 70 chr10 29178723 29179110 -116410178 - MLT1J LTR MaLR 0 511 102 1634 259 110 60 chr10 29179191 29179579 -116409709 - L2 LINE L2 -582 2732 2365 189 0 0 0 chr10 29179579 29179600 -116409688 + (TTTTG)n Simple_repeat Simple_repeat 5 25 0 2342 74 3 29 chr10 29179605 29179914 -116409374 - AluSp SINE Alu -12 301 1 1634 259 110 60 chr10 29179914 29180238 -116409050 - L2 LINE L2 -952 2362 1978 700 262 81 28 chr10 29180242 29180490 -116408798 - MIR SINE MIR 0 262 2 348 266 53 41 chr10 29180490 29180654 -116408634 - L2 LINE L2 -1352 1962 1797 184 226 19 0 chr10 29180670 29180723 -116408565 - L2 LINE L2 -1618 1696 1643 1935 201 92 0 chr10 29180726 29181140 -116408148 + MER66A LTR ERV1 27 478 0 1605 318 92 21 chr10 29181140 29181911 -116407377 - L2 LINE L2 -1655 1659 834 2345 38 14 0 chr10 29181975 29182267 -116407021 - L1PA4 LINE L1 0 6155 5860 189 0 0 0 chr10 29182402 29182423 -116406865 + (T)n Simple_repeat Simple_repeat 1 21 0 338 290 63 18 chr10 29182457 29182877 -116406411 - L1MC4a LINE L1 -1523 4687 4248 252 300 59 27 chr10 29183018 29183238 -116406050 - L1MC4a LINE L1 -2201 4009 3783 370 306 44 29 chr10 29183449 29183655 -116405633 - L1MC4a LINE L1 -2747 3463 3255 31 26 0 0 chr10 29183661 29183699 -116405589 + AT_rich Low_complexity Low_complexity 1 38 0 1931 221 130 39 chr10 29183704 29184099 -116405189 - L1MD2 LINE L1 0 6359 5883 1705 166 46 3 chr10 29184099 29184383 -116404905 - AluJo SINE Alu -16 296 1 1931 221 130 39 chr10 29184383 29184624 -116404664 - L1MD2 LINE L1 -476 5883 5665 1835 174 13 0 chr10 29184841 29185139 -116404149 - AluJb SINE Alu -8 304 3 232 256 41 66 chr10 29185232 29185353 -116403935 - L1MC4a LINE L1 -3313 2897 2780 461 322 49 6 chr10 29185652 29185835 -116403453 - MIR SINE MIR -15 247 57 2390 82 0 10 chr10 29185844 29186150 -116403138 - AluSx SINE Alu -9 303 1 21 36 0 0 chr10 29186520 29186548 -116402740 + AT_rich Low_complexity Low_complexity 1 28 0 183 42 0 0 chr10 29186623 29186647 -116402641 + (TG)n Simple_repeat Simple_repeat 1 24 0 548 127 0 13 chr10 29187274 29187353 -116401935 - AluJ SINE Alu -28 284 207 687 227 0 0 chr10 29187369 29187501 -116401787 - AluJ SINE Alu -169 133 2 2259 85 7 0 chr10 29187569 29187874 -116401414 + AluSx SINE Alu 1 307 -5 407 186 39 10 chr10 29188362 29188464 -116400824 - L1M4 LINE L1 -1198 4948 4844 24 0 0 0 chr10 29188989 29189013 -116400275 + AT_rich Low_complexity Low_complexity 1 24 0 2354 77 3 0 chr10 29189398 29189698 -116399590 - AluSc SINE Alu -8 301 1 1705 157 26 0 chr10 29189832 29190137 -116399151 - L1MC1 LINE L1 -5 6328 6016 1973 101 4 4 chr10 29190137 29190405 -116398883 + AluSq SINE Alu 1 268 -45 1547 141 8 8 chr10 29190508 29190749 -116398539 + AluSp SINE Alu 71 311 -2 187 267 33 33 chr10 29191169 29191229 -116398059 + MER5A DNA MER1_type 44 103 -86 340 343 0 0 chr10 29191331 29191477 -116397811 + MERVL LTR ERVL 881 1026 -4459 270 254 0 15 chr10 29191479 29191546 -116397742 + MLT2F LTR ERVL 1 66 -597 7033 110 6 0 chr10 29191647 29192758 -116396530 + L1P LINE L1 2450 3567 -2579 2688 230 80 60 chr10 29192877 29194633 -116394655 - L1MC4a LINE L1 -4516 1625 1 2048 123 41 3 chr10 29194638 29194930 -116394358 - AluSx SINE Alu -9 303 1 353 310 60 73 chr10 29195005 29195237 -116394051 - L1ME LINE L1 -546 5575 5347 640 208 56 22 chr10 29195870 29196048 -116393240 + MER53 DNA DNA 1 184 -5 2088 127 3 0 chr10 29197215 29197506 -116391782 - AluSx SINE Alu -20 292 1 22 35 0 0 chr10 29197572 29197601 -116391687 + AT_rich Low_complexity Low_complexity 1 29 0 283 311 0 0 chr10 29197738 29197844 -116391444 + L1P LINE L1 3589 3694 -2452 930 231 65 15 chr10 29197847 29198107 -116391181 + MER82 DNA MER2_type 2 274 -379 582 262 14 0 chr10 29198228 29198369 -116390919 + MER82 DNA MER2_type 511 653 0 380 238 167 52 chr10 29198521 29198731 -116390557 + L1MC/D LINE L1 4586 4819 -1327 592 248 84 97 chr10 29199109 29199318 -116389970 + L1MC/D LINE L1 5325 5535 -635 2037 122 0 0 chr10 29199318 29199597 -116389691 + AluSg1 SINE Alu 21 299 -10 592 248 84 97 chr10 29199597 29199900 -116389388 + L1MC/D LINE L1 5535 5824 -346 27 29 0 0 chr10 29200252 29200286 -116389002 + AT_rich Low_complexity Low_complexity 1 34 0 427 253 115 35 chr10 29200977 29201151 -116388137 + MER5A DNA MER1_type 1 188 -1 24 0 0 0 chr10 29201885 29201909 -116387379 + AT_rich Low_complexity Low_complexity 1 24 0 225 256 41 83 chr10 29202106 29202227 -116387061 - MLT1H LTR MaLR 0 549 434 383 231 8 16 chr10 29202378 29202499 -116386789 - MLT1H LTR MaLR -383 166 47 450 0 0 0 chr10 29203084 29203134 -116386154 + (TA)n Simple_repeat Simple_repeat 2 51 0 1206 219 43 78 chr10 29203367 29203822 -116385466 + MLT1H LTR MaLR 3 517 -32 326 208 0 94 chr10 29204371 29204477 -116384811 - MLT1H LTR MaLR 0 549 454 243 133 0 0 chr10 29205142 29205187 -116384101 + (TTTTC)n Simple_repeat Simple_repeat 5 49 0 * 452 121 10 30 chr10 29205183 29205282 -116384006 + (TCC)n Simple_repeat Simple_repeat 3 99 0 1346 174 5 0 chr10 29205307 29205526 -116383762 + AluSg/x SINE Alu 85 304 -6 1393 193 40 33 chr10 29205532 29205807 -116383481 - AluJo SINE Alu -35 277 1 2338 94 48 23 chr10 29207455 29207806 -116381482 + THE1B LTR MaLR 1 360 -4 62 58 0 0 chr10 29208239 29208343 -116380945 + AT_rich Low_complexity Low_complexity 1 104 0 1923 164 7 3 chr10 29208400 29208704 -116380584 + AluJo SINE Alu 6 310 -2 258 324 83 85 chr10 29209283 29209898 -116379390 + L2 LINE L2 2699 3313 0 227 256 87 120 chr10 29209909 29210151 -116379137 - L2 LINE L2 -33 3239 3006 1624 174 10 24 chr10 29210341 29210635 -116378653 + AluJb SINE Alu 3 292 -20 1490 174 58 34 chr10 29210765 29211059 -116378229 + AluJo SINE Alu 2 302 -10 413 279 111 20 chr10 29211064 29211269 -116378019 - L2 LINE L2 -260 3012 2790 572 308 82 29 chr10 29211320 29211475 -116377813 - LTR33 LTR ERVL 0 521 376 1896 106 91 0 chr10 29211475 29211750 -116377538 + AluSg SINE Alu 1 300 -10 572 308 82 29 chr10 29211750 29212048 -116377240 - LTR33 LTR ERVL -145 376 44 1792 129 18 3 chr10 29212120 29212406 -116376882 - L1PB4 LINE L1 -13 6143 5854 218 56 28 0 chr10 29212412 29212448 -116376840 + (TTGTG)n Simple_repeat Simple_repeat 1 37 0 2200 108 3 3 chr10 29212448 29212744 -116376544 - AluSc SINE Alu -13 296 1 2232 118 18 33 chr10 29212746 29213080 -116376208 - L1PB4 LINE L1 -290 5866 5537 2295 112 0 0 chr10 29213080 29213376 -116375912 + AluSx SINE Alu 1 296 -16 2232 118 18 33 chr10 29213376 29213440 -116375848 - L1PB4 LINE L1 -619 5537 5474 748 299 29 17 chr10 29213974 29214215 -116375073 + MIR SINE MIR 1 244 -18 203 239 0 0 chr10 29214397 29214443 -116374845 - L2 LINE L2 -5 3308 3263 461 180 20 10 chr10 29215434 29215534 -116373754 - MER63C DNA MER1_type -5 925 825 221 156 0 47 chr10 29215534 29215598 -116373690 + A-rich Low_complexity Low_complexity 1 61 0 210 37 0 0 chr10 29215804 29215831 -116373457 + (CAAAAA)n Simple_repeat Simple_repeat 1 27 0 907 196 52 83 chr10 29215834 29215902 -116373386 - MER63C DNA MER1_type -226 835 766 1708 180 0 17 chr10 29215902 29216196 -116373092 + AluJo SINE Alu 22 310 -2 907 196 52 83 chr10 29216196 29216424 -116372864 - MER63C DNA MER1_type -295 766 547 182 33 67 0 chr10 29216424 29216454 -116372834 + T-rich Low_complexity Low_complexity 2 33 0 907 196 52 83 chr10 29216454 29216482 -116372806 - MER63C DNA MER1_type -514 547 520 934 253 109 0 chr10 29216484 29216777 -116372511 + MER58B DNA MER1_type 2 326 -15 885 203 52 44 chr10 29216776 29217047 -116372241 - MER63C DNA MER1_type -390 540 268 * 226 158 0 0 chr10 29217044 29217082 -116372206 + MER63 DNA MER1_type 489 526 -534 * 6627 195 60 30 chr10 29217143 29219614 -116369674 + L1M4c LINE L1 9 2634 -3748 279 238 89 0 chr10 29219715 29219816 -116369472 + L1M4c LINE L1 2632 2741 -3641 3951 264 202 23 chr10 29219816 29221364 -116367924 + L2 LINE L2 1078 2902 -412 292 250 53 0 chr10 29221390 29221466 -116367822 + L2 LINE L2 3186 3265 -48 2084 131 35 44 chr10 29221535 29221902 -116367386 + THE1B LTR MaLR 1 364 0 195 42 0 0 chr10 29223447 29223471 -116365817 + (T)n Simple_repeat Simple_repeat 1 24 0 341 64 0 0 chr10 29223655 29223702 -116365586 - MADE1 DNA Mariner 0 80 34 1994 238 53 46 chr10 29223719 29224421 -116364867 + L1ME3 LINE L1 5449 6155 -7 204 213 213 0 chr10 29224715 29224776 -116364512 - MER5B DNA MER1_type -101 77 4 499 316 32 0 chr10 29224885 29225043 -116364245 - HAL1 LINE L1 -1824 683 521 1428 202 93 0 chr10 29225043 29225375 -116363913 - MSTB LTR MaLR 0 426 64 2474 124 18 0 chr10 29225375 29225755 -116363533 - MSTB-int LTR MaLR -17 1634 1248 295 355 88 15 chr10 29225801 29226074 -116363214 - HAL1 LINE L1 -2070 437 145 505 237 40 0 chr10 29226164 29226309 -116362979 - L1ME3 LINE L1 0 6170 6019 963 284 30 47 chr10 29226320 29226721 -116362567 - LTR16A LTR ERVL 0 450 57 942 267 20 0 chr10 29226749 29227045 -116362243 - L1ME3 LINE L1 -151 6011 5710 1462 246 101 21 chr10 29227047 29227445 -116361843 - L1ME3 LINE L1 -2978 3168 2803 2236 116 0 0 chr10 29227445 29227737 -116361551 + AluY SINE Alu 1 292 -19 1462 246 101 21 chr10 29227737 29228186 -116361102 - L1ME3 LINE L1 -3343 2803 2223 1314 219 57 7 chr10 29228487 29228665 -116360623 - AluJo SINE Alu 0 312 112 209 33 33 0 chr10 29228665 29228695 -116360593 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1314 219 57 7 chr10 29228695 29228813 -116360475 - AluJo SINE Alu -200 112 1 1647 164 13 59 chr10 29229268 29229573 -116359715 - AluJo SINE Alu -21 291 1 2029 153 0 3 chr10 29230545 29230846 -116358442 - AluSx SINE Alu -12 300 1 359 352 83 32 chr10 29232640 29232856 -116356432 + L2 LINE L2 2560 2786 -528 919 191 0 6 chr10 29232907 29233064 -116356224 - FRAM SINE Alu -23 153 1 1656 137 8 0 chr10 29233400 29233648 -116355640 - AluSg SINE Alu 0 310 61 342 0 0 0 chr10 29234157 29234195 -116355093 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 249 327 28 9 chr10 29234215 29234322 -116354966 + L1ME3A LINE L1 5989 6097 -73 228 35 0 0 chr10 29235577 29235606 -116353682 + (GA)n Simple_repeat Simple_repeat 2 30 0 354 319 70 5 chr10 29236620 29236805 -116352483 + L2 LINE L2 3045 3241 -31 186 43 0 0 chr10 29236821 29236844 -116352444 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 894 176 29 12 chr10 29236929 29237099 -116352189 + FRAM SINE Alu 1 173 -3 1856 159 3 0 chr10 29237538 29237828 -116351460 + AluJo SINE Alu 1 291 -21 367 380 28 0 chr10 29237910 29238089 -116351199 + L3 LINE CR1 323 506 -1071 197 211 19 0 chr10 29238162 29238214 -116351074 + L3 LINE CR1 639 691 -886 1294 222 73 22 chr10 29238223 29238538 -116350750 + MER2 DNA MER2_type 15 345 0 403 391 9 5 chr10 29238547 29238759 -116350529 + L3 LINE CR1 695 907 -670 508 289 139 27 chr10 29238775 29239069 -116350219 + L3 LINE CR1 1117 1443 -134 2160 133 128 16 chr10 29240806 29241189 -116348099 + MSTA LTR MaLR 1 426 -2 2404 98 0 3 chr10 29243581 29243887 -116345401 + AluY SINE Alu 2 306 -5 2273 122 0 0 chr10 29244748 29245059 -116344229 - AluSx SINE Alu 0 312 2 213 260 87 120 chr10 29245247 29245489 -116343799 + L2 LINE L2 3006 3239 -33 258 328 78 80 chr10 29245500 29246115 -116343173 - L2 LINE L2 0 3313 2699 1931 165 7 0 chr10 29246694 29246997 -116342291 - AluJo SINE Alu -2 310 6 62 58 0 0 chr10 29247054 29247158 -116342130 + AT_rich Low_complexity Low_complexity 1 104 0 2509 94 48 23 chr10 29247591 29247942 -116341346 - THE1B LTR MaLR -4 360 1 5988 213 64 43 chr10 29249658 29251893 -116337395 + L1MB2 LINE L1 2648 5154 -2411 1346 142 47 39 chr10 29251893 29252126 -116337162 + MER46A DNA MER2_type 1 235 -1 5988 213 64 43 chr10 29252126 29253084 -116336204 + L1MB2 LINE L1 5154 6090 -1475 1361 220 37 3 chr10 29253368 29253549 -116335739 - AluJb SINE Alu -2 310 114 189 0 0 0 chr10 29253549 29253570 -116335718 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 1361 220 37 3 chr10 29253570 29253683 -116335605 - AluJb SINE Alu -198 114 6 32284 108 14 56 chr10 29254115 29254130 -116335158 - L1PA7 LINE L1 0 6154 6140 2660 129 21 0 chr10 29254130 29254511 -116334777 - L1PA16 LINE L1 -9 6157 5769 32284 108 14 56 chr10 29254511 29260915 -116328373 - L1PA7 LINE L1 -14 6140 13 1472 100 91 0 chr10 29260915 29261135 -116328153 - L1PA16 LINE L1 -381 5785 5546 213 39 0 0 chr10 29261388 29261414 -116327874 + (TTTTG)n Simple_repeat Simple_repeat 5 30 0 273 308 98 42 chr10 29262045 29262188 -116327100 - L2 LINE L2 -5 3308 3158 1679 192 14 83 chr10 29262197 29262529 -116326759 - MLT2D LTR ERVL -2 412 117 1988 153 0 7 chr10 29262529 29262837 -116326451 + AluSx SINE Alu 1 306 -6 1679 192 14 83 chr10 29262837 29262947 -116326341 - MLT2D LTR ERVL -297 117 1 1797 198 177 62 chr10 29263901 29264461 -116324827 - MLT1E3 LTR MaLR 0 624 1 1353 203 25 60 chr10 29264498 29264979 -116324309 + L1MB2 LINE L1 6438 6897 -688 * 1389 230 55 28 chr10 29264974 29265374 -116323914 + L1ME1 LINE L1 5751 6161 -5 23 0 0 0 chr10 29265622 29265645 -116323643 + AT_rich Low_complexity Low_complexity 1 23 0 623 219 4 8 chr10 29265828 29265979 -116323309 + L1MB2 LINE L1 7088 7241 -349 827 118 79 8 chr10 29265982 29266109 -116323179 + AluJo SINE Alu 1 136 -176 1123 199 103 10 chr10 29266112 29266404 -116322884 + L1MB2 LINE L1 7232 7550 -40 226 173 0 115 chr10 29266713 29266765 -116322523 + Alu SINE Alu 2 47 -253 553 237 94 57 chr10 29266799 29267183 -116322105 - L1MEd LINE L1 -4867 1252 855 356 204 0 3 chr10 29267203 29267272 -116322016 + MSTB LTR MaLR 1 67 -361 28 29 0 0 chr10 29267295 29267330 -116321958 + AT_rich Low_complexity Low_complexity 1 35 0 409 255 10 10 chr10 29267627 29267725 -116321563 + MER5B DNA MER1_type 21 118 -60 1711 200 100 13 chr10 29268677 29269057 -116320231 + MSTB LTR MaLR 14 426 0 1037 232 42 32 chr10 29269163 29269647 -116319641 - MLT1E LTR MaLR -9 584 1 576 277 83 32 chr10 29269846 29270099 -116319189 - MLT1J LTR MaLR -8 503 238 186 43 0 0 chr10 29270321 29270344 -116318944 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 781 116 27 0 chr10 29270361 29270473 -116318815 - AluJb SINE Alu -189 123 9 2021 146 7 0 chr10 29270494 29270796 -116318492 - AluSq SINE Alu -9 304 1 37 0 0 0 chr10 29270944 29270981 -116318307 + AT_rich Low_complexity Low_complexity 1 37 0 1857 228 68 20 chr10 29271540 29271997 -116317291 + MLT1D LTR MaLR 1 479 -26 27 62 0 0 chr10 29272154 29272202 -116317086 + AT_rich Low_complexity Low_complexity 1 48 0 1724 194 3 0 chr10 29272596 29272900 -116316388 + AluJo SINE Alu 1 305 -7 38 68 0 0 chr10 29273627 29273700 -116315588 + AT_rich Low_complexity Low_complexity 1 73 0 25 51 0 0 chr10 29273993 29274032 -116315256 + AT_rich Low_complexity Low_complexity 1 39 0 336 176 0 0 chr10 29274289 29274361 -116314927 - L1MA4A LINE L1 -230 6073 5998 446 272 27 82 chr10 29274393 29274650 -116314638 - L2 LINE L2 -837 2477 2235 393 198 55 11 chr10 29274789 29274880 -116314408 + MER94 DNA DNA 6 100 -34 1574 179 24 31 chr10 29275178 29275319 -116313969 + AluJo SINE Alu 1 141 -171 2418 73 0 19 chr10 29275319 29275633 -116313655 + AluY SINE Alu 1 308 -3 1574 179 24 31 chr10 29275633 29275782 -116313506 + AluJo SINE Alu 141 289 -23 610 315 12 12 chr10 29275916 29276167 -116313121 + L1ME2 LINE L1 5698 5948 -216 1099 154 0 0 chr10 29276179 29276348 -116312940 - AluSg/x SINE Alu -9 301 133 1639 61 0 5 chr10 29276350 29276546 -116312742 - AluSq SINE Alu -118 195 1 1723 192 0 0 chr10 29276903 29277241 -116312047 - AluJb SINE Alu 0 346 9 1014 109 15 0 chr10 29277244 29277381 -116311907 - AluJo SINE Alu -173 139 1 492 208 69 0 chr10 29278352 29278448 -116310840 + MLT1D LTR MaLR 10 112 -393 2007 106 60 42 chr10 29278448 29278779 -116310509 + THE1B LTR MaLR 2 338 -26 403 86 103 0 chr10 29278805 29278863 -116310425 + THE1B LTR MaLR 301 364 0 * 1980 175 56 41 chr10 29278863 29279256 -116310032 + MLT1D LTR MaLR 107 505 0 437 262 198 5 chr10 29279697 29279884 -116309404 + HAL1 LINE L1 816 1038 -1469 1750 101 27 0 chr10 29280184 29280441 -116308847 + L1PA10 LINE L1 5905 6168 0 507 273 7 0 chr10 29280448 29280598 -116308690 - L1ME LINE L1 -3312 2903 2753 1382 152 14 0 chr10 29280598 29280808 -116308480 + AluJo SINE Alu 91 303 -9 436 246 85 73 chr10 29280930 29281272 -116308016 - L1ME LINE L1 -4519 1877 1532 525 272 113 9 chr10 29281328 29281648 -116307640 - L1ME LINE L1 -5070 1135 783 1863 172 27 64 chr10 29281688 29281867 -116307421 + MSTD LTR MaLR 1 185 -211 2386 104 0 0 chr10 29281867 29282174 -116307114 - AluSx SINE Alu 0 312 6 1863 172 27 64 chr10 29282174 29282402 -116306886 + MSTD LTR MaLR 185 393 -3 1964 142 48 62 chr10 29282596 29283064 -116306224 + L1MB1 LINE L1 5703 6163 -5 2217 134 280 78 chr10 29283070 29283398 -116305890 + L1MCa LINE L1 1033 1293 -5133 243 61 0 0 chr10 29283398 29283431 -116305857 + (CA)n Simple_repeat Simple_repeat 1 33 0 2217 134 280 78 chr10 29283431 29283898 -116305390 + L1MCa LINE L1 1293 1989 -4437 1716 172 25 0 chr10 29283899 29284178 -116305110 + AluJb SINE Alu 1 286 -26 865 203 34 0 chr10 29284195 29284343 -116304945 + FRAM SINE Alu 4 156 -20 286 171 110 0 chr10 29284344 29284426 -116304862 + L1MCa LINE L1 1979 2069 -4357 5022 215 109 27 chr10 29284448 29285363 -116303925 + L1MB8 LINE L1 3403 4241 -1937 225 62 0 0 chr10 29285363 29285395 -116303893 + tRNA-Gly-GGA tRNA tRNA 7 38 -37 5022 215 109 27 chr10 29285395 29286789 -116302499 + L1MB8 LINE L1 4241 5955 -223 300 125 18 47 chr10 29286794 29286864 -116302424 + AluSp SINE Alu 120 181 -122 2346 108 68 5 chr10 29287016 29287386 -116301902 + MSTA LTR MaLR 36 428 0 1773 146 75 87 chr10 29288036 29288179 -116301109 - Tigger2a DNA MER2_type -2275 433 290 2103 133 7 3 chr10 29288179 29288487 -116300801 + AluSx SINE Alu 1 309 -3 1773 146 75 87 chr10 29288487 29288781 -116300507 - Tigger2a DNA MER2_type -2418 290 1 615 298 94 69 chr10 29288945 29289831 -116299457 + L2 LINE L2 2315 3230 -42 863 189 123 16 chr10 29290476 29290720 -116298568 - LOR1a LTR ERV1 0 497 228 2153 87 55 29 chr10 29290766 29291113 -116298175 - THE1B LTR MaLR -8 356 1 395 200 35 9 chr10 29291603 29291718 -116297570 + LTR33A LTR ERVL 405 522 -1 21 0 0 0 chr10 29291911 29291932 -116297356 + AT_rich Low_complexity Low_complexity 1 21 0 2343 89 0 3 chr10 29292015 29292319 -116296969 + AluY SINE Alu 1 303 -8 1204 121 0 28 chr10 29292319 29292501 -116296787 + AluSg/x SINE Alu 134 310 -2 372 346 62 6 chr10 29292760 29292810 -116296478 - MER5A DNA MER1_type 0 189 143 216 0 0 0 chr10 29292810 29292834 -116296454 + (CAAA)n Simple_repeat Simple_repeat 3 26 0 372 346 62 6 chr10 29292834 29292962 -116296326 - MER5A DNA MER1_type -46 143 1 531 0 0 0 chr10 29293022 29293081 -116296207 + (TG)n Simple_repeat Simple_repeat 1 59 0 257 0 30 0 chr10 29293080 29293113 -116296175 + (GA)n Simple_repeat Simple_repeat 1 34 0 * 383 148 0 0 chr10 29293319 29293380 -116295908 - L1PB1 LINE L1 -252 5899 5839 418 122 0 0 chr10 29293380 29293453 -116295835 + L1PB1 LINE L1 6076 6149 -2 2117 135 0 3 chr10 29294828 29295132 -116294156 - AluSx SINE Alu -9 303 1 2107 129 0 0 chr10 29295599 29295893 -116293395 - AluSx SINE Alu -4 308 15 1896 160 0 10 chr10 29296359 29296659 -116292629 + AluJb SINE Alu 3 299 -13 1772 174 14 0 chr10 29296971 29297321 -116291967 - L1MB4 LINE L1 -29 6151 5797 2182 132 0 0 chr10 29297335 29297639 -116291649 - AluSx SINE Alu -8 304 1 234 209 58 93 chr10 29299666 29299752 -116289536 + L2 LINE L2 3226 3308 -5 711 253 114 62 chr10 29299898 29300451 -116288837 + HAL1b LINE L1 310 891 -457 198 0 0 0 chr10 29301240 29301262 -116288026 + (TC)n Simple_repeat Simple_repeat 1 22 0 * 270 0 0 0 chr10 29301261 29301291 -116287997 + (CA)n Simple_repeat Simple_repeat 1 30 0 253 188 0 14 chr10 29301291 29301360 -116287928 + L1ME3A LINE L1 5242 5309 -837 5257 144 33 19 chr10 29301436 29302464 -116286824 + L1MA6 LINE L1 5258 6299 -1 1306 177 113 11 chr10 29302469 29302735 -116286553 + AluJb SINE Alu 1 293 -19 1052 244 61 43 chr10 29302844 29303287 -116286001 + L1ME3A LINE L1 5437 5887 -283 396 21 0 0 chr10 29303284 29303332 -116285956 + L1P LINE L1 5233 5280 -866 * 230 79 0 26 chr10 29303823 29303861 -116285427 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 1377 216 107 5 chr10 29303876 29304261 -116285027 - Zaphod DNA AcHobo 0 4031 3608 359 284 37 0 chr10 29304694 29304856 -116284432 + (TA)n Simple_repeat Simple_repeat 1 168 0 267 118 29 49 chr10 29304863 29304965 -116284323 + (TATAA)n Simple_repeat Simple_repeat 5 104 0 47 19 0 0 chr10 29304965 29305019 -116284269 + AT_rich Low_complexity Low_complexity 1 54 0 369 216 54 0 chr10 29305019 29305186 -116284102 + (TA)n Simple_repeat Simple_repeat 1 176 0 195 42 0 0 chr10 29305212 29305236 -116284052 + (TA)n Simple_repeat Simple_repeat 1 24 0 278 50 0 0 chr10 29305631 29305671 -116283617 + L1MA1 LINE L1 6263 6302 0 210 377 14 0 chr10 29305813 29305882 -116283406 + L2 LINE L2 3157 3226 -46 563 106 73 8 chr10 29307326 29307449 -116281839 + GA-rich Low_complexity Low_complexity 5 135 0 700 254 45 69 chr10 29307781 29307909 -116281379 + MER58B DNA MER1_type 5 135 -2285 2755 75 5 24 chr10 29307909 29308280 -116281008 - THE1B LTR MaLR 0 364 1 700 254 45 69 chr10 29308280 29308485 -116280803 + MER58B DNA MER1_type 135 330 -11 503 150 106 9 chr10 29308614 29308727 -116280561 + MLT1B LTR MaLR 1 124 -266 1959 122 0 0 chr10 29308743 29309006 -116280282 + AluSx SINE Alu 35 297 -15 273 119 0 0 chr10 29309084 29309126 -116280162 + (TC)n Simple_repeat Simple_repeat 2 43 0 520 224 34 7 chr10 29309144 29309291 -116279997 + MLT1B LTR MaLR 192 342 -48 352 318 46 29 chr10 29310580 29310753 -116278535 - MIR SINE MIR -40 222 47 424 315 39 39 chr10 29311974 29312155 -116277133 - MIR3 SINE MIR -21 187 41 22 0 0 0 chr10 29313166 29313188 -116276100 + AT_rich Low_complexity Low_complexity 1 22 0 204 325 0 0 chr10 29314565 29314605 -116274683 + MIR SINE MIR 31 70 -138 21 82 0 0 chr10 29315435 29315484 -116273804 + AT_rich Low_complexity Low_complexity 1 49 0 316 265 105 25 chr10 29315619 29315819 -116273469 - L1ME LINE L1 -340 5781 5566 312 294 63 56 chr10 29315955 29316207 -116273081 - L1ME LINE L1 -810 5336 5083 444 270 158 21 chr10 29317599 29317808 -116271480 + MIR SINE MIR 20 250 -12 319 305 16 53 chr10 29318396 29318586 -116270702 + MIR SINE MIR 47 229 -33 2176 106 26 3 chr10 29318767 29319069 -116270219 - AluSx SINE Alu -3 309 1 21 36 0 0 chr10 29319434 29319462 -116269826 + AT_rich Low_complexity Low_complexity 1 28 0 276 287 0 11 chr10 29319569 29319656 -116269632 - L1MC/D LINE L1 -2021 5787 5702 1064 129 0 47 chr10 29319816 29319986 -116269302 + AluSx SINE Alu 1 162 -150 23 68 0 0 chr10 29320436 29320480 -116268808 + AT_rich Low_complexity Low_complexity 1 44 0 22 80 0 0 chr10 29321823 29321873 -116267415 + AT_rich Low_complexity Low_complexity 1 50 0 260 289 46 98 chr10 29322655 29322789 -116266499 + MIR3 SINE MIR 21 144 -64 1835 157 3 20 chr10 29322789 29323095 -116266193 + AluJo SINE Alu 1 301 -11 260 289 46 98 chr10 29323095 29323154 -116266134 + MIR3 SINE MIR 144 204 -4 25 51 0 0 chr10 29323662 29323701 -116265587 + AT_rich Low_complexity Low_complexity 1 39 0 1667 105 24 4 chr10 29323802 29324079 -116265209 + AluSg SINE Alu 30 311 0 803 247 0 0 chr10 29324188 29324358 -116264930 + MIR SINE MIR 72 241 -21 1940 156 53 8 chr10 29324485 29324844 -116264444 + THE1C LTR MaLR 1 375 0 222 280 137 17 chr10 29324885 29325031 -116264257 - MER5A DNA MER1_type -27 151 4 21 0 0 0 chr10 29325134 29325155 -116264133 + AT_rich Low_complexity Low_complexity 1 21 0 3307 148 9 12 chr10 29325218 29325787 -116263501 - L1PA16 LINE L1 0 6166 5600 227 244 0 33 chr10 29326530 29326620 -116262668 + (CGGGG)n Simple_repeat Simple_repeat 5 91 0 204 190 35 0 chr10 29327577 29327635 -116261653 + T-rich Low_complexity Low_complexity 6 65 0 299 281 0 0 chr10 29328175 29328257 -116261031 - MIR3 SINE MIR -14 194 113 308 310 99 41 chr10 29328656 29328756 -116260532 + L1MC/D LINE L1 2843 2936 -3210 1632 157 27 34 chr10 29328756 29329049 -116260239 + AluJb SINE Alu 1 291 -21 308 310 99 41 chr10 29329049 29329341 -116259947 + L1MC/D LINE L1 2936 3258 -2888 29 28 0 0 chr10 29329857 29329893 -116259395 + AT_rich Low_complexity Low_complexity 1 36 0 2422 93 0 0 chr10 29330642 29330953 -116258335 - AluY SINE Alu 0 311 1 293 290 137 27 chr10 29331142 29331325 -116257963 - MIR SINE MIR -59 203 1 1409 202 41 3 chr10 29331856 29332148 -116257140 - AluJo SINE Alu -7 305 3 1520 163 42 49 chr10 29332946 29333253 -116256035 + AluJo SINE Alu 8 312 0 1071 99 17 0 chr10 29333260 29333432 -116255856 + (GAAA)n Simple_repeat Simple_repeat 2 176 0 21 36 0 0 chr10 29333518 29333546 -116255742 + AT_rich Low_complexity Low_complexity 1 28 0 1989 146 3 16 chr10 29333857 29334173 -116255115 + AluSx SINE Alu 1 312 0 6905 25 4 9 chr10 29334594 29335368 -116253920 + L1PA4 LINE L1 5386 6155 0 346 281 266 0 chr10 29335388 29335591 -116253697 + L1ME3A LINE L1 5906 6162 -8 * 418 289 59 40 chr10 29335587 29335891 -116253397 + L1MC/D LINE L1 3914 4223 -1923 1031 263 13 0 chr10 29336573 29336809 -116252479 - MIR SINE MIR -22 240 2 686 273 118 49 chr10 29336969 29337394 -116251894 + L1MC/D LINE L1 5260 5713 -2095 2432 97 0 0 chr10 29337398 29337708 -116251580 - AluSg SINE Alu 0 310 1 186 43 0 0 chr10 29338165 29338188 -116251100 + (CAT)n Simple_repeat Simple_repeat 3 25 0 353 264 0 0 chr10 29339074 29339146 -116250142 + L2 LINE L2 3201 3272 0 291 372 9 0 chr10 29339202 29339315 -116249973 + MIR SINE MIR 34 147 -115 339 283 14 67 chr10 29340524 29340670 -116248618 - MIR SINE MIR -66 142 20 2396 51 3 51 chr10 29342097 29342410 -116246878 - AluY SINE Alu -13 298 1 2392 124 36 30 chr10 29342631 29342993 -116246295 - THE1B LTR MaLR 0 364 1 1261 156 113 40 chr10 29344289 29344590 -116244698 + MER33 DNA MER1_type 2 324 0 1238 133 0 57 chr10 29344927 29345137 -116244151 + MER2 DNA MER2_type 1 198 -147 2268 121 0 0 chr10 29345202 29345508 -116243780 - AluSx SINE Alu -6 306 1 267 194 81 16 chr10 29345528 29345590 -116243698 + MER2 DNA MER2_type 264 329 -16 2111 110 7 3 chr10 29345654 29345945 -116243343 - AluSc SINE Alu -17 292 1 201 208 21 0 chr10 29345967 29346015 -116243273 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 852 198 148 16 chr10 29346955 29347198 -116242090 - ORSL DNA AcHobo 0 275 1 5334 147 20 3 chr10 29347622 29347814 -116241474 + L1MB3 LINE L1 5284 5471 -712 315 0 0 0 chr10 29347814 29347849 -116241439 + (CA)n Simple_repeat Simple_repeat 2 36 0 5334 147 20 3 chr10 29347849 29348534 -116240754 + L1MB3 LINE L1 5471 6176 -7 356 239 45 65 chr10 29348704 29348740 -116240548 - L1MC4a LINE L1 -1865 5943 5908 1843 183 0 0 chr10 29348740 29349046 -116240242 + AluJo SINE Alu 1 306 -6 356 239 45 65 chr10 29349046 29349164 -116240124 - L1MC4a LINE L1 -1900 5908 5792 228 294 78 20 chr10 29349201 29349303 -116239985 - L1MC4a LINE L1 -2258 5550 5443 21 36 0 0 chr10 29349491 29349519 -116239769 + AT_rich Low_complexity Low_complexity 1 28 0 505 300 65 60 chr10 29349630 29350443 -116238845 - L1MC4a LINE L1 -1097 5049 4233 2139 117 0 3 chr10 29350487 29350778 -116238510 - AluSx SINE Alu -22 290 1 232 200 55 0 chr10 29350809 29350864 -116238424 - L1P LINE L1 -1907 4239 4182 275 238 32 0 chr10 29351388 29351451 -116237837 - MIR SINE MIR -13 249 185 1524 65 0 0 chr10 29352445 29352631 -116236657 + L1PA6 LINE L1 5969 6154 0 234 91 0 0 chr10 29353699 29353732 -116235556 + (A)n Simple_repeat Simple_repeat 1 33 0 23 0 0 0 chr10 29354017 29354040 -116235248 + AT_rich Low_complexity Low_complexity 1 23 0 6937 119 58 38 chr10 29354339 29354512 -116234776 + Tigger3b DNA MER2_type 1 169 -2859 2020 113 3 7 chr10 29354512 29354821 -116234467 + AluSx SINE Alu 1 308 0 6937 119 58 38 chr10 29354821 29354986 -116234302 + Tigger3b DNA MER2_type 169 329 -2699 2277 100 3 7 chr10 29354986 29355285 -116234003 + AluSx SINE Alu 1 298 -14 6937 119 58 38 chr10 29355285 29355788 -116233500 + Tigger3b DNA MER2_type 329 821 -2207 230 81 27 0 chr10 29355788 29355825 -116233463 + (CTCA)n Simple_repeat Simple_repeat 1 38 0 6937 119 58 38 chr10 29355825 29355899 -116233389 + Tigger3b DNA MER2_type 821 892 -2136 1575 137 53 114 chr10 29355899 29356046 -116233242 - MER1B DNA MER1_type -2374 336 182 2274 105 0 16 chr10 29356046 29356359 -116232929 + AluSg SINE Alu 1 308 -2 1575 137 53 114 chr10 29356359 29356569 -116232719 - MER1B DNA MER1_type -2528 182 1 6937 119 58 38 chr10 29356569 29356855 -116232433 + Tigger3b DNA MER2_type 892 1230 -1 1839 182 0 3 chr10 29357379 29357676 -116231612 + AluJo SINE Alu 1 296 -16 211 219 0 0 chr10 29357677 29357718 -116231570 + (CATATA)n Simple_repeat Simple_repeat 2 42 0 238 258 217 0 chr10 29357728 29357848 -116231440 - L1ME4a LINE L1 -1 6120 5975 1169 131 66 22 chr10 29358109 29358292 -116230996 - MER1B DNA MER1_type -23 316 126 434 339 87 0 chr10 29358292 29358510 -116230778 - MIR SINE MIR -13 249 13 2567 49 0 7 chr10 29358791 29359097 -116230191 - AluY SINE Alu -7 304 1 627 78 0 52 chr10 29359687 29359802 -116229486 + (GGAA)n Simple_repeat Simple_repeat 2 110 0 213 39 0 0 chr10 29359803 29359829 -116229459 + (GAGAA)n Simple_repeat Simple_repeat 3 28 0 2242 109 7 0 chr10 29359831 29360124 -116229164 - AluSx SINE Alu -17 295 1 1047 95 12 30 chr10 29360357 29360525 -116228763 - AluSg/x SINE Alu -17 295 131 686 286 31 22 chr10 29362529 29362756 -116226532 - MIR SINE MIR -30 232 4 2206 98 3 7 chr10 29363386 29363682 -116225606 + AluSg SINE Alu 1 295 -15 313 142 3 42 chr10 29363682 29363759 -116225529 - L1M1 LINE L1 -621 5535 5459 743 299 29 17 chr10 29364281 29364522 -116224766 + MIR SINE MIR 1 244 -18 198 239 0 0 chr10 29364704 29364750 -116224538 - L2 LINE L2 -5 3308 3263 551 160 20 10 chr10 29365741 29365841 -116223447 - MER63C DNA MER1_type -5 925 825 191 35 0 35 chr10 29365843 29365872 -116223416 + (GAAA)n Simple_repeat Simple_repeat 2 29 0 21 0 0 0 chr10 29365883 29365904 -116223384 + AT_rich Low_complexity Low_complexity 1 21 0 183 42 0 0 chr10 29366109 29366133 -116223155 + (CAAAAA)n Simple_repeat Simple_repeat 1 24 0 1056 196 52 83 chr10 29366140 29366208 -116223080 - MER63C DNA MER1_type -226 834 765 1674 180 0 17 chr10 29366208 29366502 -116222786 + AluJo SINE Alu 22 310 -2 1056 196 52 83 chr10 29366502 29366730 -116222558 - MER63C DNA MER1_type -295 765 546 182 33 67 0 chr10 29366730 29366760 -116222528 + T-rich Low_complexity Low_complexity 2 33 0 1056 196 52 83 chr10 29366760 29366788 -116222500 - MER63C DNA MER1_type -514 546 519 1053 244 107 7 chr10 29366790 29367089 -116222199 + MER58B DNA MER1_type 2 330 -11 1016 203 52 44 chr10 29367082 29367353 -116221935 - MER63C DNA MER1_type -390 540 268 * 250 157 137 0 chr10 29367345 29367396 -116221892 + MER63 DNA MER1_type 480 537 -523 * 7425 195 60 30 chr10 29367449 29369919 -116219369 + L1M4c LINE L1 9 2634 -3748 330 198 99 10 chr10 29370020 29370121 -116219167 + L1M4c LINE L1 2632 2741 -3641 1343 307 109 19 chr10 29370121 29370662 -116218626 + L2 LINE L2 1078 1667 -1647 323 252 101 22 chr10 29370662 29370801 -116218487 + L2 LINE L2 1842 1991 -1323 21 0 0 0 chr10 29371500 29371521 -116217767 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr10 29372884 29372907 -116216381 + AT_rich Low_complexity Low_complexity 1 23 0 840 176 62 23 chr10 29373046 29373222 -116216066 + MER5A DNA MER1_type 3 185 -4 346 319 117 52 chr10 29374387 29374882 -116214406 + L1M2 LINE L1 387 913 -5936 342 115 0 0 chr10 29376816 29376868 -116212420 + (CA)n Simple_repeat Simple_repeat 2 53 0 21 0 0 0 chr10 29377977 29377998 -116211290 + GC_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr10 29378103 29378127 -116211161 + GC_rich Low_complexity Low_complexity 1 24 0 339 65 0 0 chr10 29379088 29379134 -116210154 + (TG)n Simple_repeat Simple_repeat 2 47 0 318 197 16 0 chr10 29380405 29380466 -116208822 - MSTD LTR MaLR -334 62 1 209 384 0 0 chr10 29380748 29380834 -116208454 + MER5A DNA MER1_type 45 130 -59 796 151 52 135 chr10 29380887 29381212 -116208076 - Charlie7 DNA MER1_type 0 2612 2315 2253 100 25 0 chr10 29381214 29381680 -116207608 - L1P4 LINE L1 -569 5594 5121 652 248 62 16 chr10 29381696 29381954 -116207334 - L1M1 LINE L1 -4289 3276 3007 992 239 183 10 chr10 29381988 29382403 -116206885 - Charlie7 DNA MER1_type -406 2206 1720 247 303 98 8 chr10 29382741 29382873 -116206415 - MIR SINE MIR 0 262 119 25 31 0 0 chr10 29383284 29383316 -116205972 + AT_rich Low_complexity Low_complexity 1 32 0 274 346 41 8 chr10 29383706 29383949 -116205339 - L1MC4a LINE L1 -399 7409 7159 391 274 65 60 chr10 29383987 29384202 -116205086 - L1MC5 LINE L1 -743 7218 7003 310 232 14 0 chr10 29384887 29385025 -116204263 + (CA)n Simple_repeat Simple_repeat 2 141 0 272 288 25 0 chr10 29385060 29385140 -116204148 - MER81 DNA DNA -32 82 1 423 193 255 0 chr10 29386393 29386532 -116202756 - MER5A DNA MER1_type -6 183 4 1925 216 6 33 chr10 29386542 29387052 -116202236 + L1MA9 LINE L1 5778 6273 -39 1436 171 51 20 chr10 29387339 29387631 -116201657 - AluJo SINE Alu -11 301 1 1127 229 109 68 chr10 29387966 29388419 -116200869 - MLT1J LTR MaLR -3 508 32 938 247 18 18 chr10 29388419 29388642 -116200646 + MER58A DNA MER1_type 2 224 0 1127 229 109 68 chr10 29388642 29388676 -116200612 - MLT1J LTR MaLR -479 32 1 2222 141 0 0 chr10 29388677 29388990 -116200298 - AluSq SINE Alu 0 313 1 2811 164 57 0 chr10 29389401 29389931 -116199357 - LTR31 LTR ERV1 -9 610 51 1684 204 10 16 chr10 29390520 29390833 -116198455 - AluJo SINE Alu -1 311 1 1987 81 153 16 chr10 29391695 29392015 -116197273 + THE1B LTR MaLR 1 364 0 25 0 0 0 chr10 29392164 29392189 -116197099 + AT_rich Low_complexity Low_complexity 1 25 0 33 43 0 0 chr10 29392382 29392429 -116196859 + AT_rich Low_complexity Low_complexity 1 47 0 337 273 0 34 chr10 29392861 29392949 -116196339 + L2 LINE L2 3005 3089 -224 213 39 0 0 chr10 29392960 29392986 -116196302 + (TTCC)n Simple_repeat Simple_repeat 1 26 0 629 202 17 6 chr10 29393010 29393188 -116196100 + CT-rich Low_complexity Low_complexity 1 180 0 1660 190 16 16 chr10 29393381 29393691 -116195597 - AluJo SINE Alu -2 310 1 330 286 136 13 chr10 29393710 29393864 -116195424 + L2 LINE L2 3119 3291 -22 2474 224 57 27 chr10 29393871 29394684 -116194604 - L1MCa LINE L1 -5279 891 49 374 216 0 0 chr10 29394962 29395050 -116194238 - L1PA16 LINE L1 0 6166 6079 3864 148 19 10 chr10 29395069 29395930 -116193358 - L1PB4 LINE L1 -176 5980 5116 569 253 87 39 chr10 29395952 29396371 -116192917 - MLT1J LTR MaLR 0 511 33 278 67 22 0 chr10 29396659 29396704 -116192584 + (TG)n Simple_repeat Simple_repeat 2 47 0 1295 166 92 87 chr10 29396781 29397172 -116192116 - MSTD LTR MaLR -3 393 1 284 247 71 12 chr10 29397884 29397969 -116191319 - MIR SINE MIR -6 256 167 3916 158 24 3 chr10 29398637 29399333 -116189955 - MER50 LTR ERV1 -23 711 1 1382 185 5 68 chr10 29400037 29400404 -116188884 - MER2 DNA MER2_type 0 344 1 2051 112 35 3 chr10 29400853 29401140 -116188148 - AluSx SINE Alu -16 296 1 233 210 16 48 chr10 29401802 29401864 -116187424 - MIR SINE MIR -113 149 90 208 259 0 0 chr10 29402015 29402069 -116187219 + A-rich Low_complexity Low_complexity 1 54 0 352 310 80 21 chr10 29404110 29404349 -116184939 - MLT1L LTR MaLR -10 605 353 330 78 0 169 chr10 29404522 29404565 -116184723 + L1MA8 LINE L1 6039 6065 -226 1640 145 4 0 chr10 29404565 29404806 -116184482 - AluSx SINE Alu -42 270 29 330 78 0 169 chr10 29404806 29404839 -116184449 + L1MA8 LINE L1 6065 6102 -189 1349 124 0 0 chr10 29404956 29405142 -116184146 + AluSg/x SINE Alu 111 296 -14 1926 127 3 45 chr10 29405995 29406309 -116182979 + AluSx SINE Alu 1 301 -11 206 355 36 9 chr10 29408601 29408711 -116180577 + L2 LINE L2 3160 3272 0 324 0 0 0 chr10 29410809 29410845 -116178443 + (TG)n Simple_repeat Simple_repeat 2 37 0 523 332 21 5 chr10 29412987 29413180 -116176108 + MIR3 SINE MIR 9 204 -4 225 298 51 72 chr10 29413530 29413812 -116175476 - L1M4 LINE L1 -1101 5045 4780 3152 96 7 0 chr10 29413812 29414258 -116175030 - L1PA10 LINE L1 -10 6158 5710 225 298 51 72 chr10 29414258 29414546 -116174742 - L1M4 LINE L1 -1366 4780 4487 512 315 16 63 chr10 29414892 29415460 -116173828 - L1M4 LINE L1 -2098 4048 3508 1695 160 34 17 chr10 29415603 29415897 -116173391 - AluJo SINE Alu -13 299 1 26 34 0 51 chr10 29416817 29416876 -116172412 + AT_rich Low_complexity Low_complexity 1 56 0 213 39 0 0 chr10 29417368 29417394 -116171894 + (TTC)n Simple_repeat Simple_repeat 2 27 0 1721 220 127 17 chr10 29418244 29418763 -116170525 - MLT1E2 LTR MaLR 0 626 51 962 141 0 0 chr10 29419149 29419291 -116169997 - AluJb SINE Alu -2 310 169 536 283 73 20 chr10 29419359 29419606 -116169682 - MIR SINE MIR 0 262 3 466 187 22 0 chr10 29419915 29420006 -116169282 - MIR SINE MIR -32 230 138 180 0 0 0 chr10 29421570 29421590 -116167698 + (T)n Simple_repeat Simple_repeat 1 20 0 1079 129 9 58 chr10 29422049 29422217 -116167071 + L1MA8 LINE L1 6077 6252 -39 1772 174 3 3 chr10 29422217 29422499 -116166789 + AluSx SINE Alu 1 282 -30 443 18 0 18 chr10 29422502 29422559 -116166729 + (TAAAA)n Simple_repeat Simple_repeat 2 57 0 1079 129 9 58 chr10 29422559 29422610 -116166678 + L1MA8 LINE L1 6254 6289 -2 1308 217 3 32 chr10 29422658 29422967 -116166321 - MLT1F1 LTR MaLR 0 567 268 246 210 0 0 chr10 29422961 29423023 -116166265 - MLT1F1 LTR MaLR -232 335 274 * 322 165 25 16 chr10 29423134 29423236 -116166052 - MLT1F1 LTR MaLR -222 371 274 263 140 0 0 chr10 29423306 29423356 -116165932 - MLT1F1 LTR MaLR -244 323 274 * 334 156 0 20 chr10 29423325 29423424 -116165864 - MLT1F1 LTR MaLR -232 335 264 263 185 0 15 chr10 29423391 29423456 -116165832 - MLT1F1 LTR MaLR -236 331 268 * 283 169 0 0 chr10 29423482 29423541 -116165747 - MLT1F1 LTR MaLR -232 335 277 246 155 17 0 chr10 29423544 29423602 -116165686 - MLT1F1 LTR MaLR -232 335 277 * 574 249 79 0 chr10 29423574 29423739 -116165549 - MLT1F1 LTR MaLR -232 335 158 372 164 0 0 chr10 29423793 29423854 -116165434 - 7SK RNA RNA 0 193 133 294 190 17 0 chr10 29423903 29423961 -116165327 - MLT1F1 LTR MaLR -508 59 1 446 294 128 41 chr10 29424049 29424393 -116164895 - L1M4 LINE L1 -2166 3980 3607 22 35 0 0 chr10 29425112 29425141 -116164147 + AT_rich Low_complexity Low_complexity 1 29 0 303 240 0 13 chr10 29425143 29425218 -116164070 - L1ME4a LINE L1 -6 6115 6042 618 237 0 0 chr10 29425246 29425410 -116163878 - FLAM_A SINE Alu 0 164 1 2200 148 16 82 chr10 29426182 29426326 -116162962 - L1MB7 LINE L1 0 6184 6032 1976 136 18 0 chr10 29426326 29426606 -116162682 - AluSx SINE Alu -27 285 1 2200 148 16 82 chr10 29426606 29426975 -116162313 - L1MB7 LINE L1 -152 6032 5705 1335 196 82 7 chr10 29426988 29427268 -116162020 - AluJo SINE Alu -11 301 1 1175 140 9 88 chr10 29427696 29427924 -116161364 + AluJo SINE Alu 87 296 -16 1557 36 5 0 chr10 29428143 29428335 -116160953 - L1PA5 LINE L1 0 6154 5962 458 258 33 82 chr10 29428411 29428717 -116160571 - L1ME LINE L1 -298 5823 5533 363 228 18 90 chr10 29429026 29429087 -116160201 - L1MA10 LINE L1 0 6334 6274 734 231 30 41 chr10 29429087 29429693 -116159595 - L1ME1 LINE L1 -44 6122 5423 248 275 56 70 chr10 29429751 29429893 -116159395 + MIR SINE MIR 73 212 -50 274 271 52 42 chr10 29429943 29430039 -116159249 + MIR3 SINE MIR 81 177 -31 231 204 0 0 chr10 29430090 29430139 -116159149 + (TA)n Simple_repeat Simple_repeat 2 50 0 21 0 0 0 chr10 29430336 29430357 -116158931 + AT_rich Low_complexity Low_complexity 1 21 0 422 275 162 27 chr10 29431178 29431549 -116157739 + MLT1H LTR MaLR 22 442 -107 636 271 6 18 chr10 29431986 29432156 -116157132 + MER5B DNA MER1_type 1 168 -10 279 93 0 0 chr10 29432581 29432624 -116156664 + MADE1 DNA Mariner 2 44 -36 342 304 36 7 chr10 29432637 29432775 -116156513 + MIR SINE MIR 120 261 -1 210 360 96 22 chr10 29432804 29432982 -116156306 - L3 LINE CR1 -155 1422 1232 1863 171 45 11 chr10 29433073 29433448 -116155840 - MLT1B LTR MaLR -2 388 1 262 208 0 99 chr10 29433616 29433717 -116155571 + LTR67 LTR ERVL 459 549 -8 2404 116 33 8 chr10 29434009 29434372 -116154916 + THE1C LTR MaLR 1 372 -3 632 183 50 0 chr10 29434567 29434714 -116154574 + MLT1J LTR MaLR 3 118 -328 316 249 183 6 chr10 29434805 29434974 -116154314 + MLT1J LTR MaLR 313 511 0 229 26 26 26 chr10 29435301 29435340 -116153948 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 189 271 29 71 chr10 29435541 29435611 -116153677 - L2 LINE L2 -2819 495 429 225 200 0 20 chr10 29435915 29435965 -116153323 + CT-rich Low_complexity Low_complexity 2 50 0 826 137 0 0 chr10 29435972 29436089 -116153199 - FLAM_C SINE Alu -16 117 1 329 239 37 0 chr10 29437951 29438060 -116151228 - L1M4 LINE L1 -3180 2966 2854 26 0 0 0 chr10 29438369 29438395 -116150893 + AT_rich Low_complexity Low_complexity 1 26 0 1925 115 79 0 chr10 29438398 29438677 -116150611 + AluSx SINE Alu 1 301 -11 207 0 0 0 chr10 29438677 29438700 -116150588 + (TA)n Simple_repeat Simple_repeat 2 24 0 248 189 27 14 chr10 29438719 29438793 -116150495 - L1M4 LINE L1 -3653 2493 2419 352 290 197 25 chr10 29439011 29439290 -116149998 + MLT1L LTR MaLR 141 467 -148 350 272 169 26 chr10 29439620 29439815 -116149473 + L1ME4a LINE L1 5694 5916 -205 212 256 122 0 chr10 29440417 29440499 -116148789 + MIR SINE MIR 100 191 -71 528 244 83 71 chr10 29441467 29441680 -116147608 + MLT1K LTR MaLR 315 533 -55 2431 88 0 3 chr10 29441680 29441985 -116147303 + AluSx SINE Alu 1 304 -8 528 244 83 71 chr10 29441985 29442025 -116147263 + MLT1K LTR MaLR 533 571 -17 1002 224 153 25 chr10 29443212 29443604 -116145684 + MLT1H LTR MaLR 71 549 0 1464 166 59 4 chr10 29445989 29446242 -116143046 + AluJo SINE Alu 40 306 -6 758 206 17 11 chr10 29447180 29447355 -116141933 + MLT1B LTR MaLR 215 390 0 27759 63 1 12 chr10 29448003 29452458 -116136830 - L1PA5 LINE L1 -157 5997 1591 609 299 69 18 chr10 29452744 29452961 -116136327 - MIR SINE MIR -24 238 11 1719 169 18 0 chr10 29453266 29453545 -116135743 - AluJo SINE Alu -14 298 15 2100 138 3 7 chr10 29453689 29453993 -116135295 - AluSx SINE Alu -9 303 1 576 250 7 0 chr10 29454518 29454666 -116134622 - L1ME LINE L1 -448 5722 5574 321 312 164 12 chr10 29455252 29455502 -116133786 - L2 LINE L2 -125 3188 2901 1336 178 0 9 chr10 29455502 29455727 -116133561 + AluJb SINE Alu 83 305 -7 2335 89 16 0 chr10 29455783 29456087 -116133201 + AluSx SINE Alu 2 310 -2 276 280 172 13 chr10 29456442 29456599 -116132689 - MIR SINE MIR 0 262 81 27 29 0 0 chr10 29457381 29457415 -116131873 + AT_rich Low_complexity Low_complexity 1 34 0 22 35 0 0 chr10 29457475 29457504 -116131784 + AT_rich Low_complexity Low_complexity 1 29 0 241 203 0 51 chr10 29459115 29459194 -116130094 + (TTAA)n Simple_repeat Simple_repeat 1 75 0 275 316 137 0 chr10 29459584 29459723 -116129565 + MIR SINE MIR 32 189 -73 200 295 16 0 chr10 29459730 29459791 -116129497 + (TATATG)n Simple_repeat Simple_repeat 3 64 0 2253 155 7 59 chr10 29459791 29460003 -116129285 + Tigger2a DNA MER2_type 1 178 -2530 1479 122 5 5 chr10 29460003 29460225 -116129063 - AluSq SINE Alu -6 307 86 2253 155 7 59 chr10 29460225 29460470 -116128818 + Tigger2a DNA MER2_type 178 434 0 279 236 205 37 chr10 29461377 29461538 -116127750 + MLT1J LTR MaLR 2 189 -322 249 309 100 0 chr10 29461862 29461972 -116127316 - MER91A DNA MER1_type -71 125 5 * 340 365 103 28 chr10 29461971 29462292 -116126996 + L2 LINE L2 2923 3267 -5 23 0 0 0 chr10 29463012 29463035 -116126253 + AT_rich Low_complexity Low_complexity 1 23 0 255 31 0 0 chr10 29463398 29463430 -116125858 + (TG)n Simple_repeat Simple_repeat 1 32 0 863 254 71 29 chr10 29464303 29464543 -116124745 + MIR SINE MIR 9 258 -4 286 388 47 8 chr10 29467733 29467991 -116121297 + L2 LINE L2 1830 2097 -1217 433 286 187 14 chr10 29469224 29469507 -116119781 - L1ME4a LINE L1 -16 6105 5774 248 252 28 37 chr10 29469563 29469670 -116119618 - L1ME4a LINE L1 -503 5618 5513 22 35 0 0 chr10 29470102 29470131 -116119157 + AT_rich Low_complexity Low_complexity 1 29 0 206 341 85 23 chr10 29473301 29473477 -116115811 + L2 LINE L2 2872 3058 -214 276 347 78 33 chr10 29473762 29474004 -116115284 - L2 LINE L2 -423 2891 2639 318 267 39 16 chr10 29474085 29474200 -116115088 + L1 LINE L1 4887 5005 -1141 2078 153 15 6 chr10 29474200 29474540 -116114748 - MER61A LTR ERV1 0 343 1 318 267 39 16 chr10 29474540 29474602 -116114686 + L1 LINE L1 5005 5064 -1082 1743 337 114 24 chr10 29474628 29476346 -116112942 + L2 LINE L2 720 2591 -723 269 258 136 77 chr10 29476671 29476892 -116112396 - L2 LINE L2 -2295 1019 786 2155 112 3 3 chr10 29476918 29477221 -116112067 - AluSx SINE Alu -9 303 1 3098 141 29 4 chr10 29477533 29478050 -116111238 - L1PB4 LINE L1 -13 6143 5614 255 356 175 6 chr10 29479064 29479224 -116110064 + MIR SINE MIR 15 201 -61 1124 152 15 108 chr10 29479634 29479903 -116109385 + AluJo SINE Alu 4 247 -65 180 111 0 0 chr10 29480005 29480032 -116109256 + (A)n Simple_repeat Simple_repeat 1 27 0 232 281 16 0 chr10 29480121 29480185 -116109103 + MIR SINE MIR 188 252 -10 2127 126 17 0 chr10 29480949 29481251 -116108037 - AluSq SINE Alu -6 307 1 600 275 60 30 chr10 29483562 29483762 -116105526 + MIR SINE MIR 8 213 -49 2700 16 7 3 chr10 29484030 29484339 -116104949 + AluY SINE Alu 1 310 -1 1378 194 114 19 chr10 29484412 29484773 -116104515 + MSTD LTR MaLR 1 395 -1 1426 195 84 22 chr10 29485067 29485436 -116103852 + L2 LINE L2 2222 2613 -701 2103 105 0 4 chr10 29485810 29486115 -116103173 + AluSc SINE Alu 4 307 0 501 252 24 39 chr10 29486119 29486325 -116102963 + L1ME1 LINE L1 2320 2522 -3874 2803 213 83 35 chr10 29486382 29487194 -116102094 + L1ME1 LINE L1 4951 5723 -512 1902 150 0 0 chr10 29487194 29487474 -116101814 + AluSx SINE Alu 1 280 -32 201 39 0 0 chr10 29487474 29487500 -116101788 + (CAAAA)n Simple_repeat Simple_repeat 5 30 0 2803 213 83 35 chr10 29487500 29487900 -116101388 + L1ME1 LINE L1 5722 6226 -9 703 206 82 11 chr10 29489337 29489448 -116099840 + MER33 DNA MER1_type 2 133 -2452 1931 99 0 0 chr10 29489448 29489701 -116099587 + AluSq SINE Alu 44 296 -17 703 206 82 11 chr10 29489701 29489773 -116099515 + MER33 DNA MER1_type 133 198 -126 2461 134 50 24 chr10 29489781 29490198 -116099090 + Tigger2a DNA MER2_type 7 434 0 623 136 48 24 chr10 29490198 29490323 -116098965 + MER33 DNA MER1_type 236 363 0 224 239 0 28 chr10 29491261 29491332 -116097956 + CT-rich Low_complexity Low_complexity 4 72 0 1240 86 0 0 chr10 29491524 29491676 -116097612 - AluSg/x SINE Alu -12 298 147 225 0 0 0 chr10 29492557 29492582 -116096706 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 1947 155 0 3 chr10 29492890 29493187 -116096101 + AluJo SINE Alu 1 296 -16 2161 118 0 0 chr10 29493725 29494012 -116095276 - AluSx SINE Alu -25 287 1 496 289 22 33 chr10 29494535 29494715 -116094573 - L3 LINE CR1 -9 1568 1391 204 389 26 9 chr10 29494993 29495106 -116094182 - MIR SINE MIR -87 121 6 267 233 12 23 chr10 29495467 29495553 -116093735 + (TATATG)n Simple_repeat Simple_repeat 3 87 0 261 305 39 39 chr10 29495565 29495646 -116093642 - L2 LINE L2 -4 3309 3226 3195 209 32 2 chr10 29495646 29496279 -116093009 + MER82 DNA MER2_type 1 652 -1 261 305 39 39 chr10 29496279 29496325 -116092963 - L2 LINE L2 -86 3227 3182 183 80 0 0 chr10 29496998 29497023 -116092265 + (GTTTG)n Simple_repeat Simple_repeat 2 26 0 413 357 6 6 chr10 29497204 29497375 -116091913 + G-rich Low_complexity Low_complexity 2 172 0 404 335 46 0 chr10 29497513 29497665 -116091623 - MIR SINE MIR 0 262 104 259 268 12 49 chr10 29497960 29498042 -116091246 - MER5A DNA MER1_type -63 126 48 578 350 27 48 chr10 29498141 29498435 -116090853 + L2 LINE L2 2977 3264 -8 348 247 66 96 chr10 29498899 29499065 -116090223 - MIR SINE MIR -74 188 28 2263 132 52 45 chr10 29499214 29499637 -116089651 - MSTB1 LTR MaLR -2 430 5 2221 117 3 0 chr10 29500388 29500686 -116088602 + AluSx SINE Alu 1 299 -13 5825 97 12 4 chr10 29500738 29501595 -116087693 + L1PA10 LINE L1 5328 6191 0 17587 56 2 0 chr10 29502042 29504322 -116084966 - L1P LINE L1 -2921 3225 942 6815 105 1 0 chr10 29504329 29505271 -116084017 + L1P LINE L1 11 953 -5193 226 320 33 33 chr10 29505701 29505823 -116083465 + L2 LINE L2 3143 3264 -8 223 247 41 0 chr10 29508138 29508235 -116081053 + (TA)n Simple_repeat Simple_repeat 1 101 0 798 308 159 10 chr10 29508567 29508957 -116080331 - L3 LINE CR1 -287 1290 843 462 226 37 92 chr10 29509172 29509240 -116080048 + MER5B DNA MER1_type 1 71 -107 1917 184 11 35 chr10 29509240 29509614 -116079674 + MLT1A1 LTR MaLR 1 365 0 462 226 37 92 chr10 29509614 29509709 -116079579 + MER5B DNA MER1_type 71 155 -23 522 301 104 6 chr10 29509761 29509924 -116079364 + MIR SINE MIR 58 236 -26 1653 155 65 25 chr10 29510123 29510401 -116078887 + AluJo SINE Alu 1 289 -23 398 280 0 93 chr10 29510579 29510648 -116078640 + MER5B DNA MER1_type 2 76 -102 1541 186 22 11 chr10 29510648 29510923 -116078365 + AluJb SINE Alu 3 280 -32 582 15 0 0 chr10 29510927 29510994 -116078294 + (GAAA)n Simple_repeat Simple_repeat 2 68 0 398 280 0 93 chr10 29510994 29511112 -116078176 + MER5B DNA MER1_type 79 176 -2 5521 227 52 45 chr10 29511221 29512995 -116076293 + L1M4 LINE L1 15 1817 -4829 241 333 32 59 chr10 29513190 29513376 -116075912 + L1M3d LINE L1 204 384 -5507 798 277 105 48 chr10 29513511 29513982 -116075306 + L1M4 LINE L1 552 1288 -5358 2247 115 0 3 chr10 29513986 29514291 -116074997 + AluSc SINE Alu 1 304 -5 258 138 0 0 chr10 29514295 29514353 -116074935 + (TA)n Simple_repeat Simple_repeat 1 58 0 1124 199 138 20 chr10 29514462 29514820 -116074468 + L1ME2 LINE L1 5236 5642 -522 367 279 165 0 chr10 29514817 29514975 -116074313 + L1ME2 LINE L1 5935 6118 -46 * 728 171 0 0 chr10 29516248 29516371 -116072917 + FRAM SINE Alu 1 40 0 275 297 93 22 chr10 29516699 29516881 -116072407 + HAL1b LINE L1 272 466 -882 1863 148 44 0 chr10 29516931 29517271 -116072017 + AluJb SINE Alu 1 353 0 295 213 38 12 chr10 29517317 29517397 -116071891 + HAL1b LINE L1 559 640 -708 2220 132 0 0 chr10 29517670 29517980 -116071308 + AluSx SINE Alu 1 310 -2 22 0 0 0 chr10 29518159 29518181 -116071107 + AT_rich Low_complexity Low_complexity 1 22 0 662 298 61 71 chr10 29518215 29518715 -116070573 + L1M4 LINE L1 2645 3148 -3496 1588 191 18 4 chr10 29518715 29518988 -116070300 + AluJo SINE Alu 5 281 -31 1018 15 31 0 chr10 29518991 29519121 -116070167 + (GAAA)n Simple_repeat Simple_repeat 1 134 0 662 298 61 71 chr10 29519121 29520417 -116068871 + L1M4 LINE L1 3150 4444 -2200 1626 196 11 0 chr10 29520417 29520693 -116068595 - AluJo SINE Alu -25 287 9 662 298 61 71 chr10 29520693 29520933 -116068355 + L1M4 LINE L1 4444 4685 -1959 880 138 0 0 chr10 29520938 29521068 -116068220 + AluSg/x SINE Alu 170 299 -11 882 239 62 19 chr10 29521092 29521301 -116067987 - MER58A DNA MER1_type 0 224 7 330 300 43 61 chr10 29521307 29521584 -116067704 + L1M4 LINE L1 4737 5008 -1636 517 177 30 103 chr10 29521590 29521743 -116067545 + L1MD3 LINE L1 6193 7981 0 510 309 63 61 chr10 29522652 29523114 -116066174 + L2 LINE L2 1898 2360 -954 331 339 17 34 chr10 29523117 29523235 -116066053 - L2 LINE L2 0 3272 3157 536 289 87 16 chr10 29523847 29524089 -116065199 - MIR SINE MIR 0 262 4 462 211 53 23 chr10 29524171 29524304 -116064984 - HAL1b LINE L1 -43 1305 1169 860 305 66 31 chr10 29524363 29524878 -116064410 - HAL1b LINE L1 -441 907 375 433 299 170 44 chr10 29524885 29525233 -116064055 - HAL1b LINE L1 -1009 1410 12 1234 167 144 30 chr10 29525315 29525578 -116063710 + AluJo SINE Alu 3 295 -17 948 64 40 0 chr10 29525579 29525704 -116063584 + AluY SINE Alu 178 307 -4 231 36 0 0 chr10 29526172 29526200 -116063088 + (GAAA)n Simple_repeat Simple_repeat 2 29 0 922 135 21 0 chr10 29526917 29527058 -116062230 - MER47A DNA MER2_type 0 366 223 1367 170 5 9 chr10 29527058 29527282 -116062006 - AluJo SINE Alu -84 228 6 1259 133 28 0 chr10 29527282 29527493 -116061795 - MER47A DNA MER2_type -149 217 1 525 275 149 58 chr10 29527635 29528017 -116061271 + L2 LINE L2 2897 3313 0 1515 193 33 13 chr10 29528025 29528326 -116060962 + AluJo SINE Alu 1 307 -5 245 370 31 52 chr10 29528360 29528649 -116060639 - L2 LINE L2 -465 2849 2567 2281 97 60 20 chr10 29528974 29529323 -116059965 + THE1B LTR MaLR 1 363 -1 287 214 8 0 chr10 29529482 29529613 -116059675 + (TA)n Simple_repeat Simple_repeat 2 133 0 324 226 294 7 chr10 29530433 29530579 -116058709 - MIR SINE MIR -71 191 4 27 29 0 0 chr10 29530695 29530729 -116058559 + AT_rich Low_complexity Low_complexity 1 34 0 227 154 77 0 chr10 29530912 29530964 -116058324 - L1MC4 LINE L1 -1339 6703 6648 231 88 0 0 chr10 29530968 29531002 -116058286 + (CA)n Simple_repeat Simple_repeat 2 35 0 769 134 0 0 chr10 29532440 29532559 -116056729 - AluSg/x SINE Alu 0 309 191 1715 178 72 35 chr10 29533013 29533057 -116056231 + MLT1B LTR MaLR 1 42 -348 1906 108 35 14 chr10 29533057 29533343 -116055945 - AluSq SINE Alu -11 302 11 1715 178 72 35 chr10 29533343 29533674 -116055614 + MLT1B LTR MaLR 42 390 0 1998 130 14 0 chr10 29533709 29533993 -116055295 - AluSx SINE Alu -3 309 22 1692 154 0 80 chr10 29534548 29534886 -116054402 + AluJo SINE Alu 1 311 -1 290 156 0 101 chr10 29535310 29535509 -116053779 + (TA)n Simple_repeat Simple_repeat 2 180 0 1812 178 7 10 chr10 29536320 29536629 -116052659 + AluJo SINE Alu 3 310 -2 180 0 0 0 chr10 29536713 29536733 -116052555 + (T)n Simple_repeat Simple_repeat 1 20 0 2440 177 9 2 chr10 29537201 29537647 -116051641 + MER6 DNA MER2_type 417 865 0 243 218 45 100 chr10 29537823 29537933 -116051355 - L1MC4 LINE L1 -15 8027 7924 247 296 12 37 chr10 29538096 29538177 -116051111 - L2 LINE L2 -4 3309 3231 2293 112 0 25 chr10 29538623 29538944 -116050344 + AluSq SINE Alu 1 313 0 301 219 51 0 chr10 29540530 29540667 -116048621 + (TA)n Simple_repeat Simple_repeat 1 144 0 1367 170 14 11 chr10 29540795 29541078 -116048210 - L1MA4 LINE L1 -11 6289 6006 984 173 0 0 chr10 29541719 29541869 -116047419 + FRAM SINE Alu 2 151 -25 216 0 0 0 chr10 29543179 29543203 -116046085 + (T)n Simple_repeat Simple_repeat 1 24 0 550 299 128 79 chr10 29543573 29544229 -116045059 - L2 LINE L2 -5 3267 2575 1015 167 0 6 chr10 29544988 29545150 -116044138 - AluSc SINE Alu -14 295 135 315 287 87 58 chr10 29545302 29546050 -116043238 + L1 LINE L1 4268 5037 -1109 1955 142 21 15 chr10 29546152 29546695 -116042593 - L1MA4 LINE L1 -640 5660 5119 270 136 17 0 chr10 29546698 29546757 -116042531 + L1PB4 LINE L1 6096 6155 -1 869 168 30 50 chr10 29546767 29546969 -116042319 + L1 LINE L1 4854 5051 -1095 499 336 36 81 chr10 29547789 29547993 -116041295 - L2 LINE L2 -2067 1247 1066 363 68 68 0 chr10 29547993 29548052 -116041236 + L1PB4 LINE L1 6093 6155 -1 499 336 36 81 chr10 29548052 29548231 -116041057 - L2 LINE L2 -2248 1066 881 27 0 0 0 chr10 29548753 29548780 -116040508 + AT_rich Low_complexity Low_complexity 1 27 0 24 32 0 0 chr10 29549839 29549870 -116039418 + AT_rich Low_complexity Low_complexity 1 31 0 2218 113 0 31 chr10 29550861 29551219 -116038069 + AluSx SINE Alu 1 348 0 1315 206 32 0 chr10 29551862 29552181 -116037107 + AluJo SINE Alu 1 328 0 273 265 60 0 chr10 29552384 29552467 -116036821 - HsTC2 DNA Tc2 -11 1887 1800 1352 209 43 0 chr10 29552581 29552859 -116036429 - AluJb SINE Alu -22 290 1 300 245 31 71 chr10 29552882 29552980 -116036308 + L1ME4a LINE L1 5735 5828 -1980 311 264 110 0 chr10 29553060 29553151 -116036137 + L1ME4a LINE L1 5997 6097 -24 677 221 61 17 chr10 29553251 29553290 -116035998 - MER3 DNA MER1_type -9 200 164 1729 167 44 3 chr10 29553290 29553583 -116035705 - AluSx SINE Alu -7 305 1 677 221 61 17 chr10 29553583 29553724 -116035564 - MER3 DNA MER1_type -45 164 12 351 206 92 8 chr10 29554049 29554180 -116035108 - Charlie2a DNA MER1_type -5 2857 2716 521 201 35 30 chr10 29554182 29554351 -116034937 - Charlie2a DNA MER1_type -1220 1642 1473 190 132 38 0 chr10 29554432 29554485 -116034803 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 371 254 0 26 chr10 29554490 29554604 -116034684 - Charlie2b DNA MER1_type -2116 666 556 240 289 21 31 chr10 29554605 29554702 -116034586 - Charlie2b DNA MER1_type -2553 309 214 231 281 0 0 chr10 29554740 29554804 -116034484 + (CATATA)n Simple_repeat Simple_repeat 4 67 0 332 333 213 21 chr10 29554860 29555611 -116033677 + L2 LINE L2 1755 2649 -665 22 0 0 0 chr10 29556390 29556412 -116032876 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr10 29556917 29556939 -116032349 + AT_rich Low_complexity Low_complexity 1 22 0 23617 120 12 77 chr10 29557009 29561725 -116027563 + L1P LINE L1 9 4421 -1725 931 137 0 0 chr10 29562358 29562497 -116026791 + AluSg/x SINE Alu 169 307 -3 568 308 52 15 chr10 29562523 29562851 -116026437 - L1M4 LINE L1 -1264 4882 4543 7103 52 7 2 chr10 29563277 29565018 -116024270 + L1PA7 LINE L1 4407 6153 -1 222 324 59 39 chr10 29565144 29565246 -116024042 - MIR3 SINE MIR -23 185 82 2241 130 0 0 chr10 29567562 29567869 -116021419 + AluSx SINE Alu 1 307 -5 1782 153 11 14 chr10 29568500 29568819 -116020469 + AluJo SINE Alu 1 318 0 2507 253 9 9 chr10 29568823 29569476 -116019812 + MER82 DNA MER2_type 1 653 0 239 263 74 21 chr10 29569814 29569909 -116019379 + L2 LINE L2 3164 3263 -50 2259 106 12 0 chr10 29571158 29571478 -116017810 - L1PA15 LINE L1 -6 6159 5836 3676 122 16 2 chr10 29571478 29572193 -116017095 + L1PA15 LINE L1 5109 5830 -335 554 286 41 27 chr10 29572246 29572642 -116016646 - L1MC4 LINE L1 -624 7418 7018 284 225 0 11 chr10 29572687 29572776 -116016512 + (TA)n Simple_repeat Simple_repeat 1 88 0 894 255 34 45 chr10 29572781 29573247 -116016041 + L1MCa LINE L1 1038 1498 -4928 1786 190 9 3 chr10 29573255 29573597 -116015691 - MLT1A1 LTR MaLR -1 364 21 542 247 13 13 chr10 29573603 29573761 -116015527 + L1MCa LINE L1 1684 1841 -4766 248 274 128 10 chr10 29574420 29574495 -116014793 + L1MD3 LINE L1 6439 6530 -1465 2663 123 33 26 chr10 29574495 29574925 -116014363 + Tigger2a DNA MER2_type 1 433 -1 248 274 128 10 chr10 29574925 29574951 -116014337 + L1MD3 LINE L1 6530 6552 -1443 * 1529 260 43 11 chr10 29574943 29575662 -116013626 + L1MCa LINE L1 2793 3534 -2892 324 290 51 0 chr10 29576517 29576693 -116012595 - LTR33A LTR ERVL -2 521 337 279 150 0 50 chr10 29576755 29576815 -116012473 - LTR33A LTR ERVL -327 196 140 26 30 0 0 chr10 29578459 29578492 -116010796 + AT_rich Low_complexity Low_complexity 1 33 0 276 306 298 8 chr10 29579190 29579311 -116009977 + MER91A DNA MER1_type 19 174 -22 693 181 36 22 chr10 29579682 29579820 -116009468 - AluJo SINE Alu -60 252 113 416 269 254 21 chr10 29579922 29580115 -116009173 - HAL1 LINE L1 -1778 729 492 313 284 55 0 chr10 29580416 29580525 -116008763 + L1ME LINE L1 5529 5643 -478 343 271 181 30 chr10 29580786 29580952 -116008336 - HAL1 LINE L1 -2265 242 52 31 0 0 0 chr10 29581390 29581421 -116007867 + AT_rich Low_complexity Low_complexity 1 31 0 630 306 56 46 chr10 29582506 29583023 -116006265 - ERVL LTR ERVL -450 5314 4793 4913 233 70 20 chr10 29583438 29584062 -116005226 - L1ME1 LINE L1 -306 6254 5662 2186 113 0 22 chr10 29584062 29584380 -116004908 - AluY SINE Alu 0 311 1 4913 233 70 20 chr10 29584380 29586401 -116002887 - L1ME1 LINE L1 -898 5662 3468 4999 182 69 15 chr10 29586512 29588322 -116000966 + L1PA8 LINE L1 4248 6160 -12 470 188 0 0 chr10 29588322 29588407 -116000881 - AluSq/x SINE Alu -182 130 46 396 0 0 0 chr10 29588407 29588451 -116000837 + (TATG)n Simple_repeat Simple_repeat 2 45 0 2498 255 51 20 chr10 29588540 29590050 -115999238 - L1ME1 LINE L1 -3285 3255 1732 2132 121 0 26 chr10 29590626 29590982 -115998306 - AluSx SINE Alu 0 312 1 23 54 0 0 chr10 29590987 29591024 -115998264 + AT_rich Low_complexity Low_complexity 1 37 0 1995 122 25 0 chr10 29591514 29591840 -115997448 - AluSx SINE Alu 0 333 1 2374 259 54 20 chr10 29593270 29593755 -115995533 - L1ME1 LINE L1 -5016 1524 1057 2140 128 3 0 chr10 29593755 29594051 -115995237 - AluSx SINE Alu -15 297 1 2374 259 54 20 chr10 29594051 29594863 -115994425 - L1ME1 LINE L1 -5483 1057 22 22 0 0 0 chr10 29595581 29595603 -115993685 + AT_rich Low_complexity Low_complexity 1 22 0 189 287 78 52 chr10 29595786 29595901 -115993387 - L3 LINE CR1 -263 1314 1197 338 248 248 13 chr10 29596761 29596910 -115992378 - L2 LINE L2 0 3313 3130 1799 209 62 66 chr10 29597912 29598491 -115990797 + L1ME3A LINE L1 5509 6085 -85 355 241 48 0 chr10 29598576 29598721 -115990567 + L1MD3 LINE L1 7842 7993 -2 835 165 0 0 chr10 29598896 29599017 -115990271 - FLAM_C SINE Alu -22 121 1 2261 229 76 40 chr10 29600485 29601258 -115988030 - L1ME2 LINE L1 0 6164 5359 1828 134 64 40 chr10 29601258 29601587 -115987701 - MER1B DNA MER1_type 0 337 1 2261 229 76 40 chr10 29601587 29601620 -115987668 - L1ME2 LINE L1 -805 5359 5329 477 163 23 0 chr10 29601624 29601710 -115987578 - AluSg/x SINE Alu -14 295 208 653 290 48 17 chr10 29602418 29602649 -115986639 + MIR SINE MIR 9 246 -16 2268 114 0 0 chr10 29603629 29603926 -115985362 - AluSx SINE Alu -15 297 1 204 125 0 0 chr10 29603972 29604004 -115985284 + (TG)n Simple_repeat Simple_repeat 1 32 0 498 371 36 46 chr10 29604622 29605010 -115984278 - L2 LINE L2 -60 3212 2829 186 103 0 0 chr10 29605508 29605537 -115983751 + (CAG)n Simple_repeat Simple_repeat 1 29 0 484 265 136 54 chr10 29605993 29606325 -115982963 - MLT1J LTR MaLR 0 511 153 981 167 172 0 chr10 29606380 29606566 -115982722 - AluJo SINE Alu -8 304 87 626 261 29 0 chr10 29606580 29606818 -115982470 - L1MEc LINE L1 -3686 2529 2285 347 291 99 45 chr10 29606850 29607073 -115982215 - L1MEc LINE L1 -4135 2261 2027 525 206 69 28 chr10 29607274 29607453 -115981835 - L1MA10 LINE L1 0 6334 5988 262 246 0 0 chr10 29607478 29607539 -115981749 - L1MEc LINE L1 -6300 96 36 837 270 57 63 chr10 29607613 29608633 -115980655 - L1MEd LINE L1 -4688 1622 561 572 288 106 19 chr10 29608668 29609213 -115980075 - L1MC4a LINE L1 -722 5432 5284 258 111 16 159 chr10 29609895 29609958 -115979330 - MER2 DNA MER2_type -12 333 280 1396 220 10 30 chr10 29609989 29610289 -115978999 + AluJo SINE Alu 1 294 -18 1949 130 36 20 chr10 29611247 29611368 -115977920 + AluSx SINE Alu 1 119 -193 186 71 0 0 chr10 29611368 29611396 -115977892 + (TAAAA)n Simple_repeat Simple_repeat 2 29 0 1949 130 36 20 chr10 29611396 29611575 -115977713 + AluSx SINE Alu 119 306 -6 396 288 36 39 chr10 29611732 29612013 -115977275 + L1ME LINE L1 5533 5812 -309 2186 105 3 7 chr10 29612013 29612309 -115976979 - AluSc SINE Alu -14 295 1 606 255 68 29 chr10 29612313 29612614 -115976674 - L1M4c LINE L1 -4870 1443 777 25 37 0 0 chr10 29612806 29612833 -115976455 + GC_rich Low_complexity Low_complexity 1 27 0 515 234 14 95 chr10 29612958 29613180 -115976108 + MER3 DNA MER1_type 6 209 0 1753 168 3 32 chr10 29613298 29613607 -115975681 - AluJo SINE Alu -12 300 1 356 375 85 9 chr10 29614109 29614333 -115974955 + MIR SINE MIR 3 243 -19 604 74 0 0 chr10 29614640 29614735 -115974553 + L1MA7 LINE L1 6196 6290 -1 2214 94 0 10 chr10 29614744 29615087 -115974201 + AluSq SINE Alu 1 340 0 22 0 0 0 chr10 29615318 29615340 -115973948 + AT_rich Low_complexity Low_complexity 1 22 0 493 184 41 0 chr10 29615673 29615771 -115973517 - MER99 DNA DNA -725 103 2 203 231 77 88 chr10 29615776 29615867 -115973421 - MER91A DNA MER1_type -104 92 3 250 152 0 45 chr10 29616093 29616159 -115973129 + CT-rich Low_complexity Low_complexity 4 66 0 561 265 84 50 chr10 29618990 29619228 -115970060 - MIR SINE MIR -15 247 2 592 170 0 0 chr10 29619361 29619455 -115969833 + AluJ/FLAM SINE Alu 4 97 -215 273 98 0 0 chr10 29619467 29619508 -115969780 + (GGGGA)n Simple_repeat Simple_repeat 4 44 0 1443 231 64 32 chr10 29619638 29620438 -115968850 - L1MDa LINE L1 -3562 2978 2153 3933 223 73 23 chr10 29621077 29622649 -115966639 - L1MDa LINE L1 -4379 2161 251 252 0 0 0 chr10 29622649 29622677 -115966611 + (TTG)n Simple_repeat Simple_repeat 3 30 0 3933 223 73 23 chr10 29622677 29622942 -115966346 - L1MDa LINE L1 -6289 251 1 2019 256 79 22 chr10 29622934 29623875 -115965413 - L1M4c LINE L1 -4489 1895 902 * 376 178 0 0 chr10 29623886 29623959 -115965329 - MSTC LTR MaLR -355 73 1 765 325 116 37 chr10 29623959 29625112 -115964176 + L2 LINE L2 1575 3123 -190 350 252 274 0 chr10 29625676 29625811 -115963477 - MIR SINE MIR -10 252 81 1960 154 0 0 chr10 29625908 29626187 -115963101 - AluSx SINE Alu -33 279 1 211 197 115 16 chr10 29626202 29626263 -115963025 + MIR SINE MIR 126 192 -70 812 256 75 34 chr10 29626272 29626592 -115962696 - MER46C DNA MER2_type -5 333 1 325 269 115 0 chr10 29626715 29626819 -115962469 + MIR SINE MIR 103 218 -44 2219 102 0 3 chr10 29626819 29627114 -115962174 + AluSg SINE Alu 1 294 -16 21 0 0 0 chr10 29627155 29627176 -115962112 + AT_rich Low_complexity Low_complexity 1 21 0 894 234 92 107 chr10 29628335 29628998 -115960290 + LTR50 LTR ERVL 20 672 -123 39 22 0 0 chr10 29630328 29630374 -115958914 + AT_rich Low_complexity Low_complexity 1 46 0 450 152 0 0 chr10 29630381 29630447 -115958841 - AluS SINE Alu -26 285 220 906 118 77 72 chr10 29630554 29630749 -115958539 - L1PA16 LINE L1 -247 5919 5724 1251 169 78 13 chr10 29630842 29631073 -115958215 - AluJo SINE Alu -13 299 54 606 263 105 19 chr10 29631089 29631355 -115957933 - HERVL LTR ERVL -1230 4424 4136 211 227 59 118 chr10 29631358 29631477 -115957811 - L3 LINE CR1 -77 1500 1389 1254 111 53 0 chr10 29631747 29631954 -115957334 - L1MB3 LINE L1 -3 6180 5963 441 265 57 62 chr10 29633196 29633471 -115955817 + LTR16A LTR ERVL 147 438 -12 429 353 56 15 chr10 29633482 29633751 -115955537 + L2 LINE L2 2623 2902 -412 240 220 20 0 chr10 29633826 29633876 -115955412 + L2 LINE L2 3263 3313 0 1615 166 24 104 chr10 29634369 29634545 -115954743 + MLT1B LTR MaLR 1 190 -200 1700 147 45 49 chr10 29634545 29634831 -115954457 + AluJb SINE Alu 1 285 -27 1615 166 24 104 chr10 29634831 29635075 -115954213 + MLT1B LTR MaLR 190 387 -3 2468 124 0 8 chr10 29635165 29635545 -115953743 - MER1A DNA MER1_type 0 529 153 352 333 0 16 chr10 29635885 29636011 -115953277 - L2 LINE L2 -23 3290 3167 868 179 0 73 chr10 29636022 29636201 -115953087 + FRAM SINE Alu 1 166 0 1826 115 0 95 chr10 29636861 29637165 -115952123 + AluSx SINE Alu 1 275 -37 2093 183 52 7 chr10 29637353 29637796 -115951492 + MLT1D LTR MaLR 31 493 -12 245 304 14 0 chr10 29637855 29637924 -115951364 + L2 LINE L2 3203 3272 0 1006 151 5 48 chr10 29638263 29638449 -115950839 + AluSg/x SINE Alu 132 309 -1 1740 124 0 93 chr10 29638717 29639039 -115950249 - AluJo SINE Alu -20 292 1 266 333 0 10 chr10 29639219 29639318 -115949970 - MIR3 SINE MIR -3 205 108 1559 208 3 3 chr10 29640970 29641259 -115948029 + AluJo SINE Alu 1 289 -23 385 321 42 9 chr10 29641558 29641891 -115947397 - L1M4c LINE L1 -4022 2362 2019 400 186 12 12 chr10 29641934 29642020 -115947268 - L1MD1 LINE L1 -16 6226 6141 2820 221 16 10 chr10 29642070 29642749 -115946539 - L1MD1 LINE L1 -72 6170 5488 974 180 45 36 chr10 29642775 29642997 -115946291 - MLT1A2 LTR MaLR -133 241 18 1545 199 151 5 chr10 29643015 29643432 -115945856 - MLT1A2-int LTR MaLR 0 1735 1258 2303 153 49 14 chr10 29643501 29643793 -115945495 - L1MC1 LINE L1 -177 6156 5841 1677 211 25 25 chr10 29643793 29644118 -115945170 + MLT1A1 LTR MaLR 1 328 -37 2066 112 44 0 chr10 29644118 29644414 -115944874 - AluSc SINE Alu 0 309 1 1677 211 25 25 chr10 29644414 29644453 -115944835 + MLT1A1 LTR MaLR 327 365 0 2303 153 49 14 chr10 29644453 29644605 -115944683 - L1MC1 LINE L1 -492 5841 5696 790 229 16 28 chr10 29644606 29644859 -115944429 - L1MD1 LINE L1 -2092 4054 3805 1645 244 46 28 chr10 29644905 29645619 -115943669 - L1MD1 LINE L1 -2475 3671 2945 2617 146 6 2 chr10 29645638 29646119 -115943169 + L1 LINE L1 4478 4960 -1186 2910 128 17 50 chr10 29646140 29646657 -115942631 + L1PA16 LINE L1 5660 6159 -7 323 306 211 33 chr10 29647140 29647476 -115941812 + L2 LINE L2 2221 2616 -698 196 255 39 59 chr10 29647660 29647762 -115941526 + L2 LINE L2 2977 3076 -196 342 0 0 0 chr10 29648568 29648606 -115940682 + (TG)n Simple_repeat Simple_repeat 2 39 0 2529 92 14 0 chr10 29648993 29649351 -115939937 - L1PB1 LINE L1 0 6151 5789 862 330 104 29 chr10 29649398 29650119 -115939169 + L2 LINE L2 1840 2614 -700 311 333 10 0 chr10 29650251 29650353 -115938935 + MER5A DNA MER1_type 1 103 -86 1436 178 37 40 chr10 29650499 29650797 -115938491 - AluJb SINE Alu -15 297 1 320 359 94 6 chr10 29651114 29651284 -115938004 + L2 LINE L2 3087 3271 -1 3673 34 2 0 chr10 29651329 29651767 -115937521 + L1PA4 LINE L1 5716 6154 -1 187 325 0 12 chr10 29651927 29652010 -115937278 - L2 LINE L2 -688 2626 2545 2880 190 23 29 chr10 29652061 29652681 -115936607 - MLT1E3 LTR MaLR 0 624 9 2181 103 3 0 chr10 29653152 29653444 -115935844 + AluSx SINE Alu 1 293 -19 24 0 0 0 chr10 29654061 29654085 -115935203 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr10 29654232 29654254 -115935034 + AT_rich Low_complexity Low_complexity 1 22 0 816 152 0 0 chr10 29654290 29654415 -115934873 - FRAM SINE Alu -10 166 42 312 161 18 0 chr10 29654415 29654471 -115934817 + MSTB1 LTR MaLR 271 327 -105 372 184 58 29 chr10 29654594 29654768 -115934520 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 561 320 71 0 chr10 29655092 29655289 -115933999 - MIR SINE MIR 0 262 52 359 331 143 15 chr10 29655354 29655620 -115933668 - HAL1 LINE L1 -756 1751 1452 2072 112 42 68 chr10 29655680 29656065 -115933223 - THE1C LTR MaLR 0 375 1 979 249 138 13 chr10 29656653 29657051 -115932237 - MER20B DNA MER1_type -29 754 307 1185 162 13 40 chr10 29658037 29658265 -115931023 - AluJb SINE Alu -8 304 83 188 179 0 26 chr10 29658535 29658574 -115930714 + L2 LINE L2 3217 3254 -18 457 292 72 26 chr10 29659760 29659955 -115929333 + MIR SINE MIR 3 206 -56 2517 71 0 0 chr10 29660291 29660599 -115928689 + AluY SINE Alu 1 308 -3 837 271 31 9 chr10 29660740 29660969 -115928319 - MIR SINE MIR -11 251 18 997 98 0 0 chr10 29662109 29662241 -115927047 + FLAM_C SINE Alu 1 132 -1 2118 123 0 7 chr10 29665273 29665575 -115923713 - AluSx SINE Alu -12 300 1 560 179 0 0 chr10 29666690 29666785 -115922503 - AluJb SINE Alu -28 284 190 1597 186 0 4 chr10 29666788 29667057 -115922231 - AluJb SINE Alu -44 268 1 235 233 95 17 chr10 29668939 29669055 -115920233 + L1ME LINE L1 28 152 -5918 274 331 38 6 chr10 29669218 29669378 -115919910 + L1ME LINE L1 320 484 -5586 1825 265 114 26 chr10 29669544 29669672 -115919616 + L1ME LINE L1 526 641 -5439 242 29 29 0 chr10 29669672 29669707 -115919581 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 1825 265 114 26 chr10 29669707 29670013 -115919275 + L1ME LINE L1 641 919 -5161 180 0 0 0 chr10 29670013 29670033 -115919255 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1825 265 114 26 chr10 29670033 29671044 -115918244 + L1ME LINE L1 919 2075 -4005 450 0 0 0 chr10 29671049 29671099 -115918189 + (CA)n Simple_repeat Simple_repeat 2 51 0 389 221 81 23 chr10 29671101 29671273 -115918015 + L1 LINE L1 3821 4002 -2144 1308 181 26 20 chr10 29671354 29671696 -115917592 + L1M4 LINE L1 4981 5324 -822 1941 154 7 7 chr10 29671696 29672001 -115917287 + AluSx SINE Alu 1 305 -7 1340 188 60 94 chr10 29672005 29672114 -115917174 + L1 LINE L1 3973 4084 -2062 1927 130 0 68 chr10 29672114 29672437 -115916851 + AluSx SINE Alu 1 301 -11 1340 188 60 94 chr10 29672437 29672616 -115916672 + L1 LINE L1 4084 4268 -1878 333 47 0 0 chr10 29672616 29672659 -115916629 + (CA)n Simple_repeat Simple_repeat 2 44 0 1340 188 60 94 chr10 29672659 29672870 -115916418 + L1 LINE L1 4268 4456 -1690 187 303 15 45 chr10 29673000 29673066 -115916222 - MER5B DNA MER1_type -83 95 32 1467 93 44 4 chr10 29673080 29673305 -115915983 + L1PA8 LINE L1 5938 6171 -1 241 253 157 10 chr10 29673318 29673529 -115915759 - L1MC/D LINE L1 -705 5817 5576 1995 147 3 0 chr10 29673602 29673901 -115915387 - AluSx SINE Alu -12 300 1 228 346 87 51 chr10 29673901 29674271 -115915017 - L2 LINE L2 -521 2793 2411 424 355 101 14 chr10 29674480 29674826 -115914462 - L2 LINE L2 -2315 999 624 264 216 23 23 chr10 29674832 29674920 -115914368 + MER20B DNA MER1_type 2 89 -694 2328 109 0 0 chr10 29675093 29675397 -115913891 - AluSx SINE Alu -8 304 1 750 180 71 42 chr10 29675642 29675881 -115913407 + MER20B DNA MER1_type 515 760 -23 2304 70 11 7 chr10 29676986 29677273 -115912015 - AluY SINE Alu -23 288 1 42 0 0 0 chr10 29677659 29677701 -115911587 + AT_rich Low_complexity Low_complexity 1 42 0 1579 79 34 38 chr10 29677712 29677758 -115911530 - L1MA1 LINE L1 -4 6298 6253 192 40 0 0 chr10 29677758 29677783 -115911505 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2194 106 0 3 chr10 29677783 29678066 -115911222 - AluSc SINE Alu -27 282 1 1579 79 34 38 chr10 29678066 29678284 -115911004 - L1MA1 LINE L1 -47 6255 6034 506 287 102 0 chr10 29678299 29678466 -115910822 - MIR SINE MIR -13 249 66 6443 206 53 107 chr10 29678762 29678911 -115910377 - L1MCa LINE L1 -912 5514 5359 2394 80 3 0 chr10 29678911 29679213 -115910075 + AluY SINE Alu 1 303 -8 6443 206 53 107 chr10 29679213 29680321 -115908967 - L1MCa LINE L1 -1067 5359 4193 227 191 0 0 chr10 29680321 29680363 -115908925 - AluSx SINE Alu -6 296 255 1634 134 0 0 chr10 29680363 29680579 -115908709 - AluSx SINE Alu -96 216 1 6443 206 53 107 chr10 29680579 29680720 -115908568 - L1MCa LINE L1 -2232 4194 4047 302 211 39 39 chr10 29680720 29680824 -115908464 - MER46A DNA MER2_type -2 234 131 6443 206 53 107 chr10 29680824 29682810 -115906478 - L1MCa LINE L1 -2379 4047 2180 1933 157 0 25 chr10 29682810 29683129 -115906159 - AluJb SINE Alu -1 311 1 461 297 18 0 chr10 29683261 29683426 -115905862 + L1ME3A LINE L1 4458 4625 -1521 377 210 25 95 chr10 29683498 29683698 -115905590 + L1ME3A LINE L1 5377 5562 -600 1866 184 70 25 chr10 29683713 29684115 -115905173 + MSTB1 LTR MaLR 1 420 -12 750 276 68 13 chr10 29684185 29684496 -115904792 + L1ME3A LINE L1 5613 5940 -230 2026 156 13 0 chr10 29684497 29684799 -115904489 + AluSx SINE Alu 1 306 -6 327 301 104 38 chr10 29684943 29685289 -115903999 + HAL1b LINE L1 230 598 -750 2345 84 0 7 chr10 29686520 29686829 -115902459 + AluY SINE Alu 1 307 -4 389 321 146 49 chr10 29687111 29687641 -115901647 + L2 LINE L2 2720 3289 -24 4454 213 92 27 chr10 29688845 29690210 -115899078 - Charlie1a DNA MER1_type 0 1455 3 2900 170 34 80 chr10 29690389 29691161 -115898127 + L1MB8 LINE L1 5437 6172 -6 382 211 11 0 chr10 29691233 29691328 -115897960 + MER53 DNA DNA 94 189 0 2136 118 3 0 chr10 29691393 29691690 -115897598 + AluSx SINE Alu 1 298 -14 252 338 35 98 chr10 29692060 29692375 -115896913 + L2 LINE L2 2697 2956 -316 2383 107 0 0 chr10 29692375 29692675 -115896613 - AluSx SINE Alu -12 300 1 252 338 35 98 chr10 29692675 29692956 -115896332 + L2 LINE L2 2956 3253 -19 782 119 16 0 chr10 29692989 29693115 -115896173 + L1MA3 LINE L1 6178 6305 0 2081 131 10 10 chr10 29693487 29693800 -115895488 + AluSq SINE Alu 1 313 0 1754 154 33 27 chr10 29694146 29694476 -115894812 - THE1B LTR MaLR -32 332 1 859 118 0 0 chr10 29694663 29694782 -115894506 - AluSq/x SINE Alu -194 119 1 25 0 0 0 chr10 29695415 29695440 -115893848 + AT_rich Low_complexity Low_complexity 1 25 0 1734 174 3 3 chr10 29695543 29695830 -115893458 - AluJo SINE Alu -25 287 1 26 88 0 0 chr10 29695885 29695953 -115893335 + AT_rich Low_complexity Low_complexity 1 68 0 1885 155 7 19 chr10 29696430 29696739 -115892549 + AluSx SINE Alu 1 305 -7 186 150 0 0 chr10 29699436 29699476 -115889812 + (TG)n Simple_repeat Simple_repeat 2 41 0 277 200 42 25 chr10 29699695 29699815 -115889473 + (TTATA)n Simple_repeat Simple_repeat 1 122 0 668 132 0 0 chr10 29699832 29699923 -115889365 + AluS SINE Alu 1 91 -221 31 68 0 0 chr10 29699923 29699982 -115889306 + AT_rich Low_complexity Low_complexity 1 59 0 224 130 22 0 chr10 29699988 29700034 -115889254 + (TATAA)n Simple_repeat Simple_repeat 5 51 0 2241 118 3 0 chr10 29700851 29701156 -115888132 + AluSx SINE Alu 1 306 -6 25 31 0 0 chr10 29701210 29701242 -115888046 + AT_rich Low_complexity Low_complexity 1 32 0 884 166 33 13 chr10 29703708 29703859 -115885429 - FRAM SINE Alu -11 155 2 1553 250 150 31 chr10 29704106 29704685 -115884603 + L2 LINE L2 2304 2951 -363 182 143 0 29 chr10 29704751 29704786 -115884502 + L2 LINE L2 2917 2950 -364 963 260 110 31 chr10 29704948 29705302 -115883986 + L2 LINE L2 2916 3297 -16 351 217 74 69 chr10 29705307 29705482 -115883806 + HAL1 LINE L1 2300 2475 -32 253 231 13 26 chr10 29705488 29705566 -115883722 + MER116 DNA Mariner 1 77 -3 384 256 107 48 chr10 29705573 29705862 -115883426 + L1M4 LINE L1 5028 5333 -813 1213 73 0 0 chr10 29706582 29706732 -115882556 + AluSc SINE Alu 156 305 -4 379 310 108 6 chr10 29707129 29707287 -115882001 + MIR SINE MIR 14 187 -75 35 0 0 0 chr10 29708176 29708211 -115881077 + AT_rich Low_complexity Low_complexity 1 35 0 1778 145 48 7 chr10 29710499 29710788 -115878500 - AluSx SINE Alu -11 301 1 533 123 9 26 chr10 29711101 29711215 -115878073 + (TCC)n Simple_repeat Simple_repeat 3 114 0 1121 240 47 8 chr10 29711221 29711357 -115877931 - AluJo SINE Alu -44 268 139 183 80 0 0 chr10 29711357 29711382 -115877906 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 1121 240 47 8 chr10 29711382 29711503 -115877785 - AluJo SINE Alu -173 139 1 700 200 32 0 chr10 29711505 29711630 -115877658 - FLAM_A SINE Alu -4 129 1 526 313 42 17 chr10 29711642 29711882 -115877406 - MIR SINE MIR -15 247 2 2432 96 0 0 chr10 29712258 29712571 -115876717 - AluSq SINE Alu 0 313 1 554 207 179 0 chr10 29713161 29713301 -115875987 + MER5A DNA MER1_type 25 189 0 656 254 53 16 chr10 29713907 29714096 -115875192 + MIR SINE MIR 19 214 -48 433 282 7 35 chr10 29714513 29714703 -115874585 + MLT1E LTR MaLR 1 188 -379 249 83 0 0 chr10 29714730 29714766 -115874522 + (TC)n Simple_repeat Simple_repeat 1 36 0 932 193 29 19 chr10 29714766 29714973 -115874315 - MLT1D LTR MaLR -260 245 37 661 306 177 8 chr10 29715020 29715471 -115873817 + L2 LINE L2 2787 3313 0 1840 78 142 15 chr10 29715548 29715816 -115873472 + AluSx SINE Alu 1 302 -10 251 309 96 51 chr10 29715837 29716170 -115873118 - L2 LINE L2 -879 2435 2088 1107 134 36 62 chr10 29716438 29716475 -115872813 + L1PB4 LINE L1 5937 5973 -183 1142 99 204 0 chr10 29716475 29716666 -115872622 - MER30 DNA MER1_type 0 230 1 1107 134 36 62 chr10 29716666 29716852 -115872436 + L1PB4 LINE L1 5973 6154 -2 530 168 25 17 chr10 29717009 29717128 -115872160 + MLT1D LTR MaLR 1 120 -385 1537 212 13 13 chr10 29717130 29717437 -115871851 + AluJo SINE Alu 5 311 -1 2402 92 3 0 chr10 29717624 29717929 -115871359 + AluSx SINE Alu 1 306 -6 2377 95 3 0 chr10 29718284 29718590 -115870698 - AluSp SINE Alu -6 307 1 278 221 29 48 chr10 29718719 29718823 -115870465 + L1ME1 LINE L1 926 1027 -5092 38 51 0 0 chr10 29718836 29718895 -115870393 + AT_rich Low_complexity Low_complexity 1 59 0 871 172 0 14 chr10 29719006 29719151 -115870137 + FLAM_C SINE Alu 1 143 0 181 143 54 0 chr10 29719254 29719310 -115869978 + (CATATA)n Simple_repeat Simple_repeat 6 64 0 706 305 92 23 chr10 29719406 29719928 -115869360 + L1ME1 LINE L1 3985 4542 -1587 1058 199 13 101 chr10 29719947 29720264 -115869024 - AluJo SINE Alu -12 290 2 278 284 168 39 chr10 29721296 29721581 -115867707 + MLT1D LTR MaLR 124 445 -104 263 325 42 8 chr10 29721878 29721998 -115867290 + MIR SINE MIR 50 173 -89 1867 150 0 7 chr10 29722131 29722467 -115866821 + AluJb SINE Alu 1 334 0 2115 114 0 0 chr10 29722764 29723069 -115866219 + AluSx SINE Alu 1 305 0 29 70 0 0 chr10 29723211 29723268 -115866020 + AT_rich Low_complexity Low_complexity 1 57 0 252 0 0 0 chr10 29723607 29723635 -115865653 + (A)n Simple_repeat Simple_repeat 1 28 0 2202 157 24 19 chr10 29723814 29724234 -115865054 + MSTB2 LTR MaLR 34 455 -2 533 291 80 22 chr10 29724268 29724632 -115864656 + L1ME1 LINE L1 4865 5249 -880 1279 284 67 26 chr10 29724632 29725128 -115864160 - MLT1E2 LTR MaLR 0 626 111 1938 254 51 59 chr10 29725146 29725185 -115864103 + L1ME1 LINE L1 5245 5283 -866 2159 79 10 3 chr10 29725185 29725476 -115863812 - AluY SINE Alu -18 293 1 1938 254 51 59 chr10 29725476 29726338 -115862950 + L1ME1 LINE L1 5283 6139 -10 2347 57 3 20 chr10 29726338 29726634 -115862654 + AluY SINE Alu 13 303 -8 510 289 68 44 chr10 29726673 29726967 -115862321 - L1MEc LINE L1 -4358 2038 1738 23 33 0 0 chr10 29727230 29727260 -115862028 + AT_rich Low_complexity Low_complexity 1 30 0 2354 103 0 0 chr10 29728060 29728360 -115860928 - AluSq SINE Alu -13 300 1 1590 140 76 73 chr10 29728445 29728787 -115860501 - MER2 DNA MER2_type -1 343 1 1722 168 0 26 chr10 29729350 29729653 -115859635 - AluJb SINE Alu -17 295 1 2327 111 0 6 chr10 29730205 29730520 -115858768 - AluSq SINE Alu 0 313 1 212 245 41 20 chr10 29730852 29730901 -115858387 - L3 LINE CR1 -11 1566 1517 436 259 75 14 chr10 29731164 29731311 -115857977 + MIR SINE MIR 102 257 -5 1101 163 0 11 chr10 29731566 29731744 -115857544 + AluSg/x SINE Alu 123 298 -14 350 224 0 9 chr10 29731925 29732032 -115857256 + (TA)n Simple_repeat Simple_repeat 2 107 0 2624 110 36 0 chr10 29732295 29732712 -115856576 - LTR3b LTR ERVK -68 432 1 225 108 0 0 chr10 29732769 29732806 -115856482 + (CA)n Simple_repeat Simple_repeat 2 38 0 389 272 41 14 chr10 29732841 29732988 -115856300 + MIR SINE MIR 110 260 -2 21 0 0 0 chr10 29733073 29733094 -115856194 + AT_rich Low_complexity Low_complexity 1 21 0 2076 130 3 3 chr10 29733485 29733786 -115855502 + AluSx SINE Alu 1 301 -11 1322 151 72 34 chr10 29734710 29735001 -115854287 - THE1C LTR MaLR -73 302 1 2271 65 14 0 chr10 29735660 29735976 -115853312 - AluY SINE Alu 0 320 1 530 364 65 32 chr10 29736244 29736708 -115852580 + L2 LINE L2 340 818 -2496 596 211 65 16 chr10 29736729 29736852 -115852436 + FLAM_C SINE Alu 3 131 -12 330 365 34 24 chr10 29736913 29737121 -115852167 + L2 LINE L2 912 1121 -2193 23 0 0 0 chr10 29738646 29738669 -115850619 + AT_rich Low_complexity Low_complexity 1 23 0 1429 36 0 0 chr10 29738707 29738873 -115850415 + AluY SINE Alu 146 311 0 28 29 0 0 chr10 29739405 29739440 -115849848 + AT_rich Low_complexity Low_complexity 1 35 0 1677 84 0 5 chr10 29740049 29740263 -115849025 + AluSg SINE Alu 1 213 -97 3763 133 46 27 chr10 29741860 29742044 -115847244 + Tigger3b DNA MER2_type 21 200 -2828 1726 121 3 25 chr10 29742044 29742147 -115847141 + AluSg SINE Alu 32 136 -174 2392 31 41 10 chr10 29742147 29742439 -115846849 + AluY SINE Alu 1 301 -10 1726 121 3 25 chr10 29742439 29742617 -115846671 + AluSg SINE Alu 136 307 -3 3763 133 46 27 chr10 29742617 29743109 -115846179 + Tigger3b DNA MER2_type 200 710 -521 1915 155 0 3 chr10 29744045 29744341 -115844947 + AluJo SINE Alu 1 295 -17 226 0 29 29 chr10 29744988 29745023 -115844265 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 2143 103 7 7 chr10 29745026 29745318 -115843970 - AluSq SINE Alu -21 292 1 21 0 0 0 chr10 29746071 29746092 -115843196 + AT_rich Low_complexity Low_complexity 1 21 0 1194 284 99 15 chr10 29746925 29747893 -115841395 + L1ME3A LINE L1 5100 6165 -5 209 321 110 28 chr10 29747899 29748117 -115841171 - L2 LINE L2 -81 3232 2997 * 522 288 119 43 chr10 29748102 29748380 -115840908 - L2 LINE L2 -447 2867 2569 597 200 0 9 chr10 29748400 29748510 -115840778 - MER58A DNA MER1_type 0 152 44 2173 114 0 3 chr10 29748557 29748854 -115840434 + AluSg1 SINE Alu 6 301 -8 834 205 6 0 chr10 29748854 29749010 -115840278 + AluJo/FRAM SINE Alu 135 291 -21 27 73 0 0 chr10 29749684 29749739 -115839549 + AT_rich Low_complexity Low_complexity 1 55 0 32 0 0 0 chr10 29751272 29751304 -115837984 + AT_rich Low_complexity Low_complexity 1 32 0 2442 76 0 25 chr10 29752115 29752432 -115836856 + AluY SINE Alu 1 309 -2 23 33 0 0 chr10 29752491 29752521 -115836767 + AT_rich Low_complexity Low_complexity 1 30 0 521 265 27 7 chr10 29752977 29753124 -115836164 + MIR SINE MIR 63 212 -50 2239 115 3 13 chr10 29753127 29753439 -115835849 + AluSx SINE Alu 1 309 -3 407 371 105 3 chr10 29753742 29754055 -115835233 + L1MB8 LINE L1 4821 5165 -981 2074 222 60 22 chr10 29804083 29804663 -115784625 - L1MCa LINE L1 -3655 2771 2215 2018 139 0 25 chr10 29804663 29804979 -115784309 - AluJb SINE Alu -4 308 1 2074 222 60 22 chr10 29804979 29805568 -115783720 - L1MCa LINE L1 -4211 2215 1466 8470 215 55 37 chr10 29806312 29806427 -115782861 + L1MC2 LINE L1 2065 2176 -4448 1510 199 0 25 chr10 29806427 29806744 -115782544 + AluJb SINE Alu 1 309 -3 8470 215 55 37 chr10 29806744 29808585 -115780703 + L1MC2 LINE L1 2176 3982 -2642 1057 153 8 111 chr10 29808585 29808846 -115780442 + MER46A DNA MER2_type 1 234 -2 8470 215 55 37 chr10 29808846 29808987 -115780301 + L1MC2 LINE L1 3982 4119 -2505 1634 134 0 0 chr10 29808987 29809203 -115780085 + AluSx SINE Alu 1 216 -96 245 167 0 0 chr10 29809203 29809245 -115780043 + AluSx SINE Alu 255 296 -6 8470 215 55 37 chr10 29809245 29810354 -115778934 + L1MC2 LINE L1 4119 5206 -1418 2364 83 3 0 chr10 29810354 29810656 -115778632 - AluY SINE Alu -8 303 1 8470 215 55 37 chr10 29810656 29811142 -115778146 + L1MC2 LINE L1 5206 5682 -942 2264 112 0 16 chr10 29811142 29811456 -115777832 - AluSg SINE Alu -1 309 1 8470 215 55 37 chr10 29811456 29812189 -115777099 + L1MC2 LINE L1 5682 6615 -9 3761 169 19 72 chr10 29812191 29813109 -115776179 + L1MB8 LINE L1 5304 6172 -6 382 211 11 0 chr10 29813181 29813276 -115776012 + MER53 DNA DNA 94 189 0 2146 117 3 0 chr10 29813341 29813639 -115775649 + AluSx SINE Alu 1 299 -13 252 338 35 98 chr10 29814009 29814324 -115774964 + L2 LINE L2 2697 2956 -316 2393 106 0 0 chr10 29814324 29814625 -115774663 - AluSx SINE Alu -11 301 1 252 338 35 98 chr10 29814625 29814906 -115774382 + L2 LINE L2 2956 3253 -19 782 119 16 0 chr10 29814939 29815065 -115774223 + L1MA3 LINE L1 6178 6305 0 2065 132 10 10 chr10 29815437 29815748 -115773540 + AluSq SINE Alu 1 311 -2 1697 164 33 27 chr10 29816097 29816427 -115772861 - THE1B LTR MaLR -32 332 1 1168 196 157 16 chr10 29816760 29817015 -115772273 - AluJb SINE Alu -11 291 1 234 0 0 0 chr10 29817022 29817048 -115772240 + (CA)n Simple_repeat Simple_repeat 2 27 0 223 274 55 14 chr10 29817875 29817948 -115771340 - MIR SINE MIR -71 191 116 180 0 0 0 chr10 29820639 29820659 -115768629 + (A)n Simple_repeat Simple_repeat 1 20 0 318 214 119 12 chr10 29821005 29821089 -115768199 + MIR SINE MIR 157 249 -13 735 180 102 90 chr10 29821272 29821303 -115767985 + L1MD2 LINE L1 6101 6130 -229 2282 123 0 0 chr10 29821303 29821604 -115767684 + AluSx SINE Alu 1 301 -11 735 180 102 90 chr10 29821604 29821828 -115767460 + L1MD2 LINE L1 6130 6359 0 199 324 0 14 chr10 29821842 29821916 -115767372 + MIR SINE MIR 170 242 -20 28 29 0 0 chr10 29822106 29822141 -115767147 + AT_rich Low_complexity Low_complexity 1 35 0 263 331 81 69 chr10 29822676 29822936 -115766352 - L2 LINE L2 0 3272 3010 1715 166 134 6 chr10 29822936 29823286 -115766002 + MSTD LTR MaLR 1 395 -1 234 376 68 8 chr10 29823311 29823428 -115765860 - L2 LINE L2 -12 3260 3137 24 67 0 0 chr10 29823750 29823795 -115765493 + AT_rich Low_complexity Low_complexity 1 45 0 1739 157 42 26 chr10 29824557 29824863 -115764425 + AluJo SINE Alu 1 311 -1 464 224 66 28 chr10 29825079 29825293 -115763995 - LTR41 LTR ERVL 0 795 556 895 170 5 27 chr10 29825748 29825936 -115763352 - LTR41 LTR ERVL -589 184 1 2063 153 97 8 chr10 29825974 29826367 -115762921 + MSTA LTR MaLR 1 428 0 354 198 12 0 chr10 29826367 29826453 -115762835 + AluJo SINE Alu 43 129 -173 1056 164 0 12 chr10 29826463 29826628 -115762660 + AluJo SINE Alu 137 299 -3 2418 164 8 53 chr10 29826908 29827406 -115761882 + MLT2B2 LTR ERVL 1 379 -35 412 116 101 0 chr10 29827414 29827483 -115761805 + MADE1 DNA Mariner 5 80 0 1022 170 0 0 chr10 29828245 29828404 -115760884 - FRAM SINE Alu -6 160 2 621 260 65 25 chr10 29828910 29829110 -115760178 - L2 LINE L2 -418 2896 2689 972 158 18 6 chr10 29829110 29829274 -115760014 + AluJ SINE Alu 136 301 -11 1743 290 174 12 chr10 29829282 29830082 -115759206 - L2 LINE L2 -612 2702 1774 1366 199 8 8 chr10 29830090 29830346 -115758942 - AluJo SINE Alu -20 292 37 598 247 145 49 chr10 29830349 29830653 -115758635 - L2 LINE L2 -1659 1655 1323 2160 111 14 10 chr10 29830655 29830952 -115758336 + AluSg SINE Alu 1 298 -12 189 0 0 0 chr10 29830952 29830973 -115758315 + (GA)n Simple_repeat Simple_repeat 2 22 0 3251 153 20 79 chr10 29831737 29832471 -115756817 + LTR8 LTR ERV1 1 691 0 283 293 105 23 chr10 29832643 29832776 -115756512 - L2 LINE L2 -259 3054 2911 501 292 146 0 chr10 29832789 29832967 -115756321 + MIR SINE MIR 24 227 -35 723 164 0 45 chr10 29833232 29833366 -115755922 + AluJo SINE Alu 1 128 -174 601 143 10 0 chr10 29833366 29833464 -115755824 + AluJo SINE Alu 190 288 -24 2160 130 7 0 chr10 29834391 29834699 -115754589 + AluSx SINE Alu 3 312 0 21 0 0 0 chr10 29835919 29835940 -115753348 + AT_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr10 29836927 29836955 -115752333 + AT_rich Low_complexity Low_complexity 1 28 0 1752 143 50 17 chr10 29839358 29839658 -115749630 + AluJb SINE Alu 1 310 -2 2354 68 10 0 chr10 29839716 29840008 -115749280 + AluY SINE Alu 1 295 -16 1610 82 0 5 chr10 29840079 29840287 -115749001 + AluSg/x SINE Alu 87 293 -19 2186 103 38 0 chr10 29841056 29841347 -115747941 + AluSx SINE Alu 1 302 -10 37 23 0 0 chr10 29842001 29842045 -115747243 + AT_rich Low_complexity Low_complexity 1 44 0 1819 209 32 4 chr10 29842232 29842962 -115746326 + L1MB4 LINE L1 4907 5649 -531 2360 188 4 31 chr10 29843027 29843400 -115745888 + L1MB4 LINE L1 5643 5998 -182 2113 108 24 0 chr10 29843400 29843688 -115745600 - AluSx SINE Alu -17 295 1 2360 188 4 31 chr10 29843688 29843867 -115745421 + L1MB4 LINE L1 5998 6180 0 5297 90 0 6 chr10 29844450 29845162 -115744126 - L1PA10 LINE L1 -5 6163 5456 2373 98 16 0 chr10 29845626 29845933 -115743355 + AluSx SINE Alu 1 312 0 406 277 59 63 chr10 29845952 29846644 -115742644 + L1MC/D LINE L1 921 1654 -4656 2620 55 0 0 chr10 29846750 29847058 -115742230 + AluY SINE Alu 1 308 -3 647 300 112 47 chr10 29847111 29847618 -115741670 + L1MC/D LINE L1 1832 2371 -3939 2092 102 3 11 chr10 29847674 29847986 -115741302 + AluSx SINE Alu 1 310 0 1417 289 128 20 chr10 29847986 29849209 -115740079 + L1MC/D LINE L1 2475 3829 -2300 1700 151 32 21 chr10 29849215 29849494 -115739794 + AluJo SINE Alu 1 282 -30 297 0 0 0 chr10 29849499 29849532 -115739756 + (CA)n Simple_repeat Simple_repeat 2 34 0 576 232 141 9 chr10 29849554 29849774 -115739514 + MER69 DNA AcHobo 2178 2426 -100 1496 151 94 39 chr10 29850235 29850566 -115738722 + L1MC3 LINE L1 6343 6691 -1094 2403 63 0 35 chr10 29850566 29850884 -115738404 + AluY SINE Alu 1 307 -4 847 152 7 21 chr10 29850895 29851040 -115738248 + FLAM_C SINE Alu 1 143 0 212 216 34 11 chr10 29851040 29851128 -115738160 + GA-rich Low_complexity Low_complexity 2 91 0 192 125 0 0 chr10 29851122 29851154 -115738134 + (CGAAA)n Simple_repeat Simple_repeat 2 33 0 * 4623 180 38 31 chr10 29851154 29851928 -115737360 + L1MC3 LINE L1 6675 7460 -325 1750 156 11 4 chr10 29851928 29852246 -115737042 - AluJb SINE Alu 0 323 4 4623 180 38 31 chr10 29852246 29852553 -115736735 + L1MC3 LINE L1 7460 7764 -21 311 284 137 66 chr10 29852580 29852851 -115736437 + L1MC/D LINE L1 4769 5058 -1071 356 301 126 15 chr10 29853057 29853326 -115735962 + L1MC/D LINE L1 5267 5565 -2226 2154 118 0 6 chr10 29856273 29856587 -115732701 - AluSx SINE Alu 0 312 1 506 327 161 0 chr10 29856868 29857091 -115732197 + MIR SINE MIR 2 260 -2 182 203 0 17 chr10 29858055 29858114 -115731174 + (TATG)n Simple_repeat Simple_repeat 3 60 0 4116 182 93 93 chr10 29859694 29861148 -115728140 + Charlie1a DNA MER1_type 1 1454 -1 445 205 40 3 chr10 29861158 29861308 -115727980 - MER58B DNA MER1_type 0 341 30 295 333 29 9 chr10 29862613 29862718 -115726570 + MIR SINE MIR 1 107 -155 596 90 0 0 chr10 29862802 29862880 -115726408 - AluSp/q SINE Alu -19 294 217 2620 232 72 8 chr10 29862880 29863708 -115725580 + L1M4c LINE L1 974 1854 -4530 933 188 38 61 chr10 29863749 29864010 -115725278 - THE1B LTR MaLR -109 255 1 427 248 198 13 chr10 29864036 29864193 -115725095 + MLT1I LTR MaLR 224 409 0 1654 181 49 0 chr10 29865774 29866100 -115723188 + MER7A DNA MER2_type 6 345 -1 419 198 28 38 chr10 29866114 29866220 -115723068 + L2 LINE L2 3209 3313 0 35 0 0 0 chr10 29866268 29866303 -115722985 + AT_rich Low_complexity Low_complexity 1 35 0 2055 109 14 0 chr10 29866447 29866722 -115722566 + AluSx SINE Alu 1 279 -33 352 309 70 5 chr10 29867320 29867521 -115721767 + L1MC4 LINE L1 7814 8027 -15 2062 122 11 0 chr10 29868323 29868635 -115720653 + AluSx SINE Alu 1 315 0 703 175 0 17 chr10 29868916 29869036 -115720252 + FLAM_A SINE Alu 1 118 -15 2051 120 0 27 chr10 29870045 29870346 -115718942 - AluSg SINE Alu -17 293 1 2208 128 0 0 chr10 29870854 29871166 -115718122 + AluSx SINE Alu 1 312 0 1970 95 19 4 chr10 29872287 29872550 -115716738 - AluSx SINE Alu -45 267 1 2057 120 34 0 chr10 29872554 29872845 -115716443 - AluSg SINE Alu -9 301 1 332 284 34 40 chr10 29873550 29873698 -115715590 + L1MC/D LINE L1 5620 5766 -2042 201 325 231 26 chr10 29873960 29874077 -115715211 + L2 LINE L2 3132 3272 0 2947 17 0 6 chr10 29874552 29874899 -115714389 + L1PA2 LINE L1 5811 6155 0 216 0 0 0 chr10 29875523 29875547 -115713741 + (TA)n Simple_repeat Simple_repeat 1 24 0 2210 120 0 0 chr10 29875549 29875840 -115713448 - AluSx SINE Alu -21 291 1 28 0 0 0 chr10 29875840 29875868 -115713420 + AT_rich Low_complexity Low_complexity 1 28 0 213 348 241 0 chr10 29875909 29876021 -115713267 - L2 LINE L2 -8 3264 3126 1860 144 7 26 chr10 29876437 29876742 -115712546 + AluSx SINE Alu 1 299 -13 1767 158 0 14 chr10 29876837 29877121 -115712167 + AluJb SINE Alu 1 280 -32 2185 125 13 0 chr10 29877632 29877935 -115711353 + AluSx SINE Alu 1 307 -5 772 140 0 9 chr10 29878904 29879018 -115710270 + AluJo/FLAM SINE Alu 1 113 -199 2239 88 3 3 chr10 29879020 29879326 -115709962 + AluSx SINE Alu 13 318 0 825 40 0 0 chr10 29879326 29879427 -115709861 + (TA)n Simple_repeat Simple_repeat 1 101 0 804 87 0 0 chr10 29879440 29879544 -115709744 - AluSc SINE Alu -205 104 1 2209 120 0 0 chr10 29879922 29880231 -115709057 + AluSx SINE Alu 1 309 -3 1700 156 29 7 chr10 29881163 29881439 -115707849 + AluJo SINE Alu 1 282 -30 29 0 0 0 chr10 29881722 29881751 -115707537 + AT_rich Low_complexity Low_complexity 1 29 0 250 238 71 24 chr10 29882017 29882101 -115707187 - L2 LINE L2 -1288 2026 1939 1822 174 0 0 chr10 29882426 29882707 -115706581 + AluJb SINE Alu 2 282 -30 1974 109 29 0 chr10 29883109 29883408 -115705880 - AluSx SINE Alu 0 307 1 213 282 155 0 chr10 29883428 29883499 -115705789 - MIR SINE MIR -150 112 31 859 120 0 8 chr10 29883618 29883743 -115705545 + FRAM SINE Alu 47 170 -6 236 341 90 78 chr10 29883802 29884057 -115705231 + L2 LINE L2 3004 3261 -11 845 249 61 9 chr10 29884207 29884420 -115704868 + MER58A DNA MER1_type 1 224 0 514 270 66 135 chr10 29884434 29884617 -115704671 - L2 LINE L2 0 3313 3119 1258 128 66 26 chr10 29884617 29884844 -115704444 + MER46A DNA MER2_type 1 236 0 514 270 66 135 chr10 29884844 29884903 -115704385 - L2 LINE L2 -194 3119 3058 1611 186 3 10 chr10 29884903 29885193 -115704095 + AluJb SINE Alu 1 288 -24 207 0 0 0 chr10 29885196 29885219 -115704069 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 514 270 66 135 chr10 29885219 29885562 -115703726 - L2 LINE L2 -257 3056 2769 2190 117 0 10 chr10 29885599 29885899 -115703389 + AluSx SINE Alu 1 297 -15 1319 93 0 0 chr10 29885920 29886092 -115703196 + AluY SINE Alu 134 305 -6 1770 138 4 14 chr10 29886663 29886939 -115702349 - AluJo SINE Alu -1 311 39 204 192 0 58 chr10 29887537 29887555 -115701733 + G-rich Low_complexity Low_complexity 6 23 -31 728 181 8 0 chr10 29887555 29887682 -115701606 + FLAM_A SINE Alu 1 128 -5 204 192 0 58 chr10 29887682 29887715 -115701573 + G-rich Low_complexity Low_complexity 23 54 0 2242 103 0 7 chr10 29888843 29889143 -115700145 + AluSc SINE Alu 1 298 -11 399 187 44 0 chr10 29889451 29889542 -115699746 + L1ME3A LINE L1 6064 6158 -12 2302 106 3 3 chr10 29890055 29890367 -115698921 - AluSx SINE Alu 0 312 1 848 264 24 0 chr10 29891000 29891212 -115698076 + AluJo SINE Alu 4 220 -92 2547 59 10 0 chr10 29891243 29891548 -115697740 - AluY SINE Alu -3 308 1 21 36 0 0 chr10 29891548 29891576 -115697712 + AT_rich Low_complexity Low_complexity 1 28 0 629 316 65 37 chr10 29892264 29892556 -115696732 + L2 LINE L2 2227 2534 -780 2234 117 0 0 chr10 29892556 29892856 -115696432 - AluSx SINE Alu -12 300 1 629 316 65 37 chr10 29892856 29892965 -115696323 + L2 LINE L2 2534 2639 -675 2548 70 0 0 chr10 29893180 29893480 -115695808 - AluSx SINE Alu -12 300 1 218 212 59 119 chr10 29894009 29894060 -115695228 - MIR SINE MIR -32 230 178 1630 167 36 14 chr10 29894060 29894336 -115694952 + AluJb SINE Alu 1 282 -30 180 0 0 0 chr10 29894338 29894358 -115694930 + (CAAT)n Simple_repeat Simple_repeat 2 21 0 218 212 59 119 chr10 29894358 29894421 -115694867 - MIR SINE MIR -85 177 120 1405 87 12 127 chr10 29894421 29894673 -115694615 + MER30 DNA MER1_type 8 230 0 21 36 0 0 chr10 29895196 29895224 -115694064 + AT_rich Low_complexity Low_complexity 1 28 0 1932 109 87 0 chr10 29896596 29896872 -115692416 + AluSx SINE Alu 1 300 -12 1872 173 56 0 chr10 29897373 29897697 -115691591 + MER2 DNA MER2_type 1 342 -2 2161 128 0 28 chr10 29898218 29898538 -115690750 - AluSx SINE Alu -1 311 1 804 302 20 8 chr10 29898774 29899022 -115690266 - MIR SINE MIR 0 262 12 447 304 99 31 chr10 29900421 29900612 -115688676 + MIR SINE MIR 47 250 -12 1214 105 0 0 chr10 29900669 29900831 -115688457 - AluSg/x SINE Alu -17 295 134 1155 100 0 0 chr10 29900831 29900981 -115688307 - Ricksha DNA DNA -1203 2043 1894 1648 142 0 0 chr10 29900981 29901221 -115688067 - AluSx SINE Alu -13 299 60 706 167 167 37 chr10 29901258 29901474 -115687814 - LTR65 LTR ERV1 -244 425 182 1264 139 0 0 chr10 29901605 29901785 -115687503 - FRAM SINE Alu -1 175 1 401 89 59 15 chr10 29903635 29903770 -115685518 + (TCTA)n Simple_repeat Simple_repeat 1 141 0 1583 196 11 0 chr10 29903770 29904045 -115685243 - AluJo SINE Alu -25 287 10 284 337 106 39 chr10 29905102 29905545 -115683743 + L2 LINE L2 2771 3240 -32 1857 89 12 0 chr10 29907558 29907804 -115681484 - AluY SINE Alu -62 249 1 21 36 0 0 chr10 29907804 29907832 -115681456 + AT_rich Low_complexity Low_complexity 1 28 0 629 316 65 37 chr10 29908520 29908812 -115680476 + L2 LINE L2 2227 2534 -780 2234 117 0 0 chr10 29908812 29909112 -115680176 - AluSx SINE Alu -12 300 1 629 316 65 37 chr10 29909112 29909221 -115680067 + L2 LINE L2 2534 2639 -675 2548 70 0 0 chr10 29909436 29909736 -115679552 - AluSx SINE Alu -12 300 1 218 212 59 119 chr10 29910265 29910316 -115678972 - MIR SINE MIR -32 230 178 1630 167 36 14 chr10 29910316 29910592 -115678696 + AluJb SINE Alu 1 282 -30 180 0 0 0 chr10 29910594 29910614 -115678674 + (CAAT)n Simple_repeat Simple_repeat 2 21 0 218 212 59 119 chr10 29910614 29910677 -115678611 - MIR SINE MIR -85 177 120 1405 87 12 127 chr10 29910677 29910929 -115678359 + MER30 DNA MER1_type 8 230 0 21 36 0 0 chr10 29911452 29911480 -115677808 + AT_rich Low_complexity Low_complexity 1 28 0 1932 109 87 0 chr10 29912852 29913128 -115676160 + AluSx SINE Alu 1 300 -12 1872 173 56 0 chr10 29913629 29913953 -115675335 + MER2 DNA MER2_type 1 342 -2 2161 128 0 28 chr10 29914474 29914794 -115674494 - AluSx SINE Alu -1 311 1 804 302 20 8 chr10 29915030 29915278 -115674010 - MIR SINE MIR 0 262 12 447 304 99 31 chr10 29916677 29916868 -115672420 + MIR SINE MIR 47 250 -12 2278 102 0 0 chr10 29916925 29917220 -115672068 - AluSx SINE Alu -17 295 1 1107 193 72 77 chr10 29918512 29918595 -115670693 + L1MC5 LINE L1 6984 7066 -895 2251 102 3 3 chr10 29918595 29918890 -115670398 - AluSp SINE Alu -18 295 1 1107 193 72 77 chr10 29918890 29919210 -115670078 + L1MC5 LINE L1 7066 7385 -576 21 0 0 0 chr10 29919251 29919272 -115670016 + AT_rich Low_complexity Low_complexity 1 21 0 2347 99 0 6 chr10 29919469 29919781 -115669507 + AluY SINE Alu 2 311 0 2672 221 38 32 chr10 29919977 29920669 -115668619 + Charlie1a DNA MER1_type 1 696 -759 783 113 20 67 chr10 29920677 29920827 -115668461 + L1MA10 LINE L1 6090 6232 -102 535 183 250 12 chr10 29920837 29921001 -115668287 - Charlie1 DNA MER1_type -497 2264 2062 587 133 0 0 chr10 29921007 29921097 -115668191 + L1MA10 LINE L1 6235 6324 -10 3075 170 92 27 chr10 29921106 29921649 -115667639 + Charlie1 DNA MER1_type 2007 2608 -153 2018 148 0 3 chr10 29921649 29921946 -115667342 - AluJb SINE Alu -16 296 1 3075 170 92 27 chr10 29921946 29922109 -115667179 + Charlie1 DNA MER1_type 2608 2759 -2 2306 101 0 3 chr10 29922423 29922720 -115666568 + AluSx SINE Alu 1 296 -16 319 278 189 39 chr10 29923012 29923192 -115666096 - L2 LINE L2 -516 2798 2592 1909 173 0 0 chr10 29923223 29923524 -115665764 - AluSx SINE Alu -11 301 1 281 247 86 74 chr10 29923700 29923862 -115665426 - L1MC5 LINE L1 -30 7931 7768 2170 123 0 3 chr10 29923877 29924178 -115665110 - AluSq SINE Alu -13 300 1 1928 117 3 27 chr10 29924729 29925029 -115664259 + AluSx SINE Alu 1 293 -19 3845 123 116 9 chr10 29925036 29925720 -115663568 + Tigger3(Golem) DNA MER2_type 2273 3029 0 475 263 53 29 chr10 29925909 29926080 -115663208 - MER5B DNA MER1_type -1 177 3 230 258 19 126 chr10 29926696 29926855 -115662433 + L1ME LINE L1 5378 5519 -643 367 301 123 21 chr10 29927111 29927347 -115661941 - L2 LINE L2 -5 3308 3049 1876 80 52 52 chr10 29927431 29927720 -115661568 + AluY SINE Alu 1 289 -22 593 230 182 10 chr10 29928156 29928365 -115660923 - MIR SINE MIR -10 252 8 673 261 11 27 chr10 29928375 29928559 -115660729 + MER5A DNA MER1_type 9 189 0 14895 125 41 6 chr10 29930485 29930822 -115658466 - Tigger1 DNA MER2_type -1 2417 2093 2178 114 3 3 chr10 29930822 29931120 -115658168 + AluSx SINE Alu 1 298 -14 14895 125 41 6 chr10 29931120 29933084 -115656204 - Tigger1 DNA MER2_type -325 2093 34 2489 57 0 7 chr10 29933172 29933472 -115655816 - AluY SINE Alu -13 298 1 2001 105 41 27 chr10 29934075 29934370 -115654918 + AluSx SINE Alu 1 299 -13 23 0 0 0 chr10 29935976 29935999 -115653289 + GC_rich Low_complexity Low_complexity 1 23 0 379 255 116 107 chr10 29936071 29936503 -115652785 + L1M2 LINE L1 478 1226 -5623 284 337 106 39 chr10 29938283 29938726 -115650562 - L2 LINE L2 -32 3240 2771 1583 196 11 0 chr10 29939783 29940058 -115649230 + AluJo SINE Alu 10 287 -25 401 89 59 15 chr10 29940058 29940193 -115649095 + (TAGA)n Simple_repeat Simple_repeat 1 141 0 1264 139 0 0 chr10 29942043 29942223 -115647065 + FRAM SINE Alu 1 175 -1 1099 194 144 92 chr10 29942354 29942607 -115646681 + LTR65 LTR ERV1 182 420 -249 1868 97 0 0 chr10 29942607 29942845 -115646443 + AluSx SINE Alu 60 297 -15 1099 194 144 92 chr10 29942845 29943049 -115646239 + LTR65 LTR ERV1 420 663 -6 2169 169 61 17 chr10 29943064 29943407 -115645881 + MSTB LTR MaLR 1 366 -60 2388 96 0 0 chr10 29943407 29943709 -115645579 - AluSx SINE Alu -10 302 1 2169 169 61 17 chr10 29943709 29943773 -115645515 + MSTB LTR MaLR 366 426 0 557 90 0 13 chr10 29944265 29944343 -115644945 - MADE1 DNA Mariner -3 77 1 275 320 100 0 chr10 29944394 29944494 -115644794 + L2 LINE L2 3154 3263 -9 845 170 7 0 chr10 29945008 29945143 -115644145 + AluJo SINE Alu 1 136 -176 273 29 0 0 chr10 29945167 29945201 -115644087 + (CA)n Simple_repeat Simple_repeat 2 35 0 413 161 138 11 chr10 29945387 29945474 -115643814 - LTR12 LTR ERV1 0 714 617 287 218 69 0 chr10 29945474 29945561 -115643727 - LTR30 LTR ERV1 -70 652 560 333 193 72 12 chr10 29945562 29945645 -115643643 - LTR12 LTR ERV1 -422 292 205 1268 126 42 59 chr10 29945684 29945922 -115643366 - LTR12 LTR ERV1 -480 234 1 2197 127 0 9 chr10 29946633 29946948 -115642340 + AluSx SINE Alu 1 312 0 1767 154 3 40 chr10 29947108 29947407 -115641881 - AluJb SINE Alu -23 289 2 502 186 24 89 chr10 29947567 29947691 -115641597 - L2 LINE L2 -2 3270 3155 303 175 35 0 chr10 29948169 29948226 -115641062 + MER102a DNA MER1_type 53 111 -219 1682 190 13 10 chr10 29948268 29948579 -115640709 + AluJo SINE Alu 1 312 0 848 141 5 32 chr10 29948593 29948778 -115640510 + GA-rich Low_complexity Low_complexity 1 180 0 290 265 43 43 chr10 29948799 29948961 -115640327 + MER102a DNA MER1_type 169 330 0 332 98 39 0 chr10 29949049 29949100 -115640188 + L1MC3 LINE L1 7045 7097 -688 275 259 24 0 chr10 29949101 29949186 -115640102 + MLT1F1 LTR MaLR 36 122 -445 2701 161 89 47 chr10 29949188 29949557 -115639731 + L1MC3 LINE L1 7187 7590 -195 2276 113 7 0 chr10 29949557 29949866 -115639422 + AluSx SINE Alu 1 311 -1 2701 161 89 47 chr10 29949866 29950068 -115639220 + L1MC3 LINE L1 7590 7782 -3 1727 177 0 23 chr10 29950639 29950944 -115638344 + AluJo SINE Alu 1 298 -14 326 243 14 0 chr10 29951200 29951270 -115638018 - MER91B DNA MER1_type -26 164 94 524 180 72 18 chr10 29951291 29951402 -115637886 - MER91B DNA MER1_type -60 130 14 396 286 21 7 chr10 29951600 29951740 -115637548 + MIR SINE MIR 121 262 0 2027 148 3 3 chr10 29951797 29952100 -115637188 + AluSx SINE Alu 1 303 -9 2527 108 129 5 chr10 29952379 29952760 -115636528 - MSTA LTR MaLR 0 428 1 1067 123 0 7 chr10 29952793 29952939 -115636349 + AluJo SINE Alu 6 150 -162 1616 156 76 4 chr10 29953087 29953363 -115635925 + AluSx SINE Alu 1 296 -16 30 0 0 0 chr10 29953880 29953910 -115635378 + AT_rich Low_complexity Low_complexity 1 30 0 514 316 47 26 chr10 29954757 29954947 -115634341 - MIR SINE MIR -62 200 7 2180 107 3 3 chr10 29954980 29955269 -115634019 - AluSx SINE Alu -11 301 13 378 0 0 0 chr10 29955344 29955386 -115633902 + (TG)n Simple_repeat Simple_repeat 2 43 0 188 33 0 33 chr10 29955772 29955802 -115633486 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 1567 190 7 10 chr10 29956288 29956400 -115632888 + AluJo SINE Alu 22 133 -179 2418 74 3 0 chr10 29956400 29956699 -115632589 + AluY SINE Alu 1 300 -11 1567 190 7 10 chr10 29956699 29956875 -115632413 + AluJo SINE Alu 133 309 -3 748 209 0 0 chr10 29956958 29957087 -115632201 + FLAM_C SINE Alu 1 129 -4 457 264 40 0 chr10 29957274 29957399 -115631889 - L2 LINE L2 -7 3306 3177 1917 178 26 6 chr10 29957461 29957804 -115631484 + MLT1A1 LTR MaLR 16 365 0 189 195 0 49 chr10 29957826 29957867 -115631421 - MIR SINE MIR -26 236 198 803 274 83 0 chr10 29957874 29958126 -115631162 - Charlie4a DNA MER1_type 0 508 236 603 211 89 83 chr10 29958197 29958349 -115630939 - MIR SINE MIR -73 189 34 1491 173 0 4 chr10 29958349 29958580 -115630708 - AluJb SINE Alu -77 235 6 603 211 89 83 chr10 29958580 29958607 -115630681 - MIR SINE MIR -228 34 9 1818 150 0 56 chr10 29958760 29958877 -115630411 + AluJo SINE Alu 1 123 -189 2258 123 0 0 chr10 29958877 29959185 -115630103 - AluSx SINE Alu -4 308 1 1818 150 0 56 chr10 29959185 29959387 -115629901 + AluJo SINE Alu 123 302 -10 21 0 0 0 chr10 29960961 29960982 -115628306 + AT_rich Low_complexity Low_complexity 1 21 0 2336 60 0 11 chr10 29962745 29963030 -115626258 + AluY SINE Alu 18 299 -12 312 255 81 36 chr10 29963503 29963629 -115625659 + L1ME LINE L1 1 131 -5939 484 200 24 0 chr10 29963630 29963715 -115625573 + FAM SINE Alu 1 78 -98 366 247 11 34 chr10 29963747 29963836 -115625452 + FAM SINE Alu 81 167 -8 1643 203 0 19 chr10 29964022 29964338 -115624950 - AluJo SINE Alu -2 310 1 540 283 112 0 chr10 29964366 29964553 -115624735 + L2 LINE L2 3105 3312 -1 1960 149 7 0 chr10 29964947 29965252 -115624036 - AluSx SINE Alu 0 307 1 381 43 0 0 chr10 29965617 29965664 -115623624 + (TG)n Simple_repeat Simple_repeat 2 48 0 244 236 211 62 chr10 29965951 29966059 -115623229 - MIR SINE MIR -1 261 170 1943 159 0 3 chr10 29966059 29966348 -115622940 - AluJo SINE Alu -24 288 1 244 236 211 62 chr10 29966348 29966447 -115622841 - MIR SINE MIR -92 170 23 2241 98 7 10 chr10 29966523 29966830 -115622458 - AluSq SINE Alu -7 306 1 2185 114 0 26 chr10 29967296 29967603 -115621685 + AluSx SINE Alu 1 299 -13 1369 236 54 22 chr10 29968243 29968611 -115620677 - MLT1F LTR MaLR 0 542 163 837 29 0 29 chr10 29968613 29968716 -115620572 - AluY SINE Alu -15 296 197 535 243 181 7 chr10 29968716 29968860 -115620428 - MLT1F LTR MaLR -371 171 3 325 306 52 17 chr10 29968932 29969105 -115620183 + L1ME LINE L1 2843 3021 -3059 987 187 6 12 chr10 29969114 29969280 -115620008 + FRAM SINE Alu 1 165 -1 1848 87 0 90 chr10 29969281 29969569 -115619719 - AluY SINE Alu -49 262 1 253 242 11 33 chr10 29969623 29969714 -115619574 + L1ME LINE L1 3136 3224 -2856 1051 163 0 11 chr10 29969748 29969926 -115619362 + FRAM SINE Alu 1 176 0 1192 110 0 0 chr10 29970008 29970171 -115619117 + AluSg/x SINE Alu 144 306 -6 432 0 0 0 chr10 29970209 29970257 -115619031 + (CA)n Simple_repeat Simple_repeat 1 48 0 370 222 118 52 chr10 29970322 29970457 -115618831 - L2 LINE L2 0 3313 3170 1985 88 22 18 chr10 29970468 29970740 -115618548 - AluSc SINE Alu -10 299 27 209 145 87 0 chr10 29970796 29970865 -115618423 + GA-rich Low_complexity Low_complexity 2 76 0 2109 120 3 13 chr10 29971507 29971815 -115617473 + AluSx SINE Alu 1 305 -7 1259 221 0 41 chr10 29972446 29972740 -115616548 - AluJo SINE Alu 0 312 31 2075 120 0 23 chr10 29973293 29973592 -115615696 + AluSx SINE Alu 1 292 -20 24 0 0 0 chr10 29973592 29973616 -115615672 + AT_rich Low_complexity Low_complexity 1 24 0 446 295 52 80 chr10 29974445 29974696 -115614592 + L1ME LINE L1 3637 3880 -2200 10151 163 24 1 chr10 29974923 29977416 -115611872 - L1PA13 LINE L1 -11 6152 3607 617 253 84 69 chr10 29977477 29977679 -115611609 + MLT1G1 LTR MaLR 150 392 -176 231 223 75 53 chr10 29977704 29977798 -115611490 + MLT1H LTR MaLR 456 595 0 901 221 22 40 chr10 29977918 29978144 -115611144 - MER58A DNA MER1_type -1 223 2 1022 281 113 73 chr10 29978196 29978556 -115610732 - L2 LINE L2 -821 2493 2149 2646 157 19 32 chr10 29978556 29978988 -115610300 + MSTB LTR MaLR 1 426 0 1022 281 113 73 chr10 29978988 29979315 -115609973 - L2 LINE L2 -1165 2149 1778 282 304 94 12 chr10 29979532 29979703 -115609585 + L1ME LINE L1 3940 4124 -1956 919 187 8 92 chr10 29979766 29980017 -115609271 + MER63C DNA MER1_type 255 484 -446 407 159 14 0 chr10 29980018 29980087 -115609201 - MSTB2 LTR MaLR 0 457 388 1668 162 0 18 chr10 29980087 29980359 -115608929 + AluJb SINE Alu 1 267 -45 904 104 35 12 chr10 29980361 29980534 -115608754 + GA-rich Low_complexity Low_complexity 4 180 0 182 171 24 0 chr10 29980559 29980600 -115608688 + A-rich Low_complexity Low_complexity 3 44 0 2158 144 83 19 chr10 29980604 29980978 -115608310 - MSTB2 LTR MaLR -57 400 3 1934 167 8 25 chr10 29980979 29981344 -115607944 + MER63C DNA MER1_type 480 838 -92 612 209 31 31 chr10 29981346 29981509 -115607779 + MER63C DNA MER1_type 768 930 0 27 0 0 0 chr10 29981709 29981736 -115607552 + AT_rich Low_complexity Low_complexity 1 27 0 622 205 42 18 chr10 29981749 29981915 -115607373 + L1ME LINE L1 4424 4593 -1487 2136 93 0 0 chr10 29982403 29982671 -115606617 - AluSc SINE Alu -41 268 1 372 251 104 27 chr10 29982681 29982868 -115606420 + L1ME LINE L1 5080 5251 -847 997 209 104 14 chr10 29982868 29983165 -115606123 - MER33 DNA MER1_type 0 324 1 372 251 104 27 chr10 29983165 29983296 -115605992 + L1ME LINE L1 5251 5423 -675 1180 210 0 5 chr10 29983360 29983579 -115605709 + AluJb SINE Alu 87 304 -8 200 239 22 0 chr10 29983583 29983629 -115605659 + GA-rich Low_complexity Low_complexity 2 48 0 2327 83 0 32 chr10 29984151 29984463 -115604825 - AluY SINE Alu -9 302 1 1013 268 40 43 chr10 29984840 29985213 -115604075 - MER110 LTR ERV1 -15 476 105 2033 140 0 10 chr10 29985503 29985811 -115603477 + AluSx SINE Alu 5 309 -3 229 270 110 0 chr10 29985839 29985939 -115603349 + MLT1L LTR MaLR 487 597 -18 397 336 55 23 chr10 29986021 29986241 -115603047 - L2 LINE L2 -480 2834 2608 404 283 20 0 chr10 29986295 29986394 -115602894 - L2 LINE L2 0 3313 3213 199 200 0 44 chr10 29986494 29986539 -115602749 - MIR SINE MIR -103 159 117 839 182 0 0 chr10 29986555 29986687 -115602601 + FLAM_A SINE Alu 1 132 -1 1884 146 9 19 chr10 29986889 29987204 -115602084 - AluJo SINE Alu 0 312 1 2839 98 3 11 chr10 29987425 29987792 -115601496 - THE1B LTR MaLR 0 364 1 763 306 41 18 chr10 29987854 29988194 -115601094 + L2 LINE L2 2862 3209 -104 1867 167 0 10 chr10 29988510 29988810 -115600478 - AluSx SINE Alu -15 297 1 228 83 62 0 chr10 29989129 29989177 -115600111 + (TA)n Simple_repeat Simple_repeat 2 52 0 195 214 45 79 chr10 29989186 29989275 -115600013 + L2 LINE L2 2211 2296 -1018 355 329 7 0 chr10 29989564 29989701 -115599587 + LTR67 LTR ERVL 418 555 -2 1717 161 68 7 chr10 29989754 29990046 -115599242 + AluJo SINE Alu 1 310 -2 2462 35 6 41 chr10 29990158 29990472 -115598816 - AluY SINE Alu -8 303 1 1860 156 13 3 chr10 29990769 29991077 -115598211 - AluJb SINE Alu 0 312 2 2592 53 0 0 chr10 29991190 29991494 -115597794 - AluY SINE Alu -7 304 1 2302 109 3 0 chr10 29991937 29992248 -115597040 + AluSx SINE Alu 1 312 0 181 191 0 85 chr10 29992262 29992309 -115596979 + MER5A DNA MER1_type 43 85 -104 1461 181 0 15 chr10 29992714 29992979 -115596309 + AluJo SINE Alu 44 304 -8 567 0 0 0 chr10 29992980 29993043 -115596245 + (GGAAA)n Simple_repeat Simple_repeat 1 63 0 2126 123 0 0 chr10 29993092 29993430 -115595858 - AluSx SINE Alu 0 338 1 1308 195 13 42 chr10 29994614 29994779 -115594509 + L1ME1 LINE L1 5276 5444 -722 1930 101 7 61 chr10 29994779 29994925 -115594363 + AluSg SINE Alu 1 153 -159 2833 3 0 0 chr10 29994925 29995223 -115594065 + AluYa5 SINE Alu 1 298 -13 1930 101 7 61 chr10 29995223 29995404 -115593884 + AluSg SINE Alu 153 312 0 2438 56 3 37 chr10 29995407 29995729 -115593559 + AluY SINE Alu 1 311 0 1308 195 13 42 chr10 29995729 29995866 -115593422 + L1ME1 LINE L1 5446 5574 -592 1158 219 40 92 chr10 29995869 29996348 -115592940 + L1ME1 LINE L1 5685 6301 -33 1568 176 16 38 chr10 29996374 29996693 -115592595 - AluJo SINE Alu 0 312 1 1459 90 30 5 chr10 29997463 29997663 -115591625 + AluSc SINE Alu 96 300 -9 186 43 0 0 chr10 29997666 29997689 -115591599 + (GGA)n Simple_repeat Simple_repeat 3 25 0 1503 170 28 60 chr10 29997765 29998082 -115591206 + AluJo SINE Alu 1 307 -5 28 0 0 0 chr10 29998360 29998388 -115590900 + AT_rich Low_complexity Low_complexity 1 28 0 2174 122 0 0 chr10 29998394 29998682 -115590606 - AluSx SINE Alu -24 288 1 263 320 7 34 chr10 29998922 29999069 -115590219 + GA-rich Low_complexity Low_complexity 6 148 0 3919 147 6 14 chr10 29999121 29999768 -115589520 - LTR48B LTR ERV1 -2 642 1 539 205 34 0 chr10 29999867 29999984 -115589304 + L1PB4 LINE L1 6033 6153 -3 1981 169 0 0 chr10 29999992 30000294 -115588994 + AluJb SINE Alu 1 302 -10 1547 166 63 0 chr10 30000937 30001221 -115588067 - AluJo SINE Alu -9 303 2 2323 119 0 0 chr10 30001954 30002265 -115587023 - AluSx SINE Alu -1 311 1 2406 77 7 7 chr10 30002423 30002723 -115586565 - AluSc SINE Alu -9 300 1 1138 132 9 71 chr10 30003009 30003221 -115586067 + AluJo SINE Alu 1 199 -113 1458 120 0 0 chr10 30003232 30003424 -115585864 + AluSg/x SINE Alu 112 303 -9 901 188 38 0 chr10 30003424 30003584 -115585704 + AluJo/FRAM SINE Alu 134 299 -13 455 173 19 0 chr10 30003589 30003693 -115585595 + GA-rich Low_complexity Low_complexity 4 109 0 352 223 64 0 chr10 30003703 30003797 -115585491 - L2 LINE L2 -354 2960 2861 616 321 11 5 chr10 30003957 30004147 -115585141 - MER91A DNA MER1_type -2 194 4 1822 190 76 66 chr10 30004372 30004642 -115584646 - MLT1D LTR MaLR 0 505 226 354 23 0 0 chr10 30004642 30004685 -115584603 + (CA)n Simple_repeat Simple_repeat 1 43 0 1822 190 76 66 chr10 30004685 30004914 -115584374 - MLT1D LTR MaLR -279 226 1 3183 97 41 0 chr10 30005042 30005505 -115583783 + L1PA16 LINE L1 5676 6157 -9 22 0 0 0 chr10 30005505 30005527 -115583761 + AT_rich Low_complexity Low_complexity 1 22 0 1397 211 30 30 chr10 30005860 30006164 -115583124 + AluJo SINE Alu 1 304 -8 504 328 20 10 chr10 30006230 30006425 -115582863 - MIR SINE MIR -55 207 11 2176 133 0 0 chr10 30006442 30006743 -115582545 + AluSx SINE Alu 1 301 -11 242 192 77 0 chr10 30006743 30006821 -115582467 - L1MC4 LINE L1 -1346 6696 6613 233 179 18 36 chr10 30007835 30007891 -115581397 - L2 LINE L2 -75 3238 3184 211 198 70 0 chr10 30007912 30007998 -115581290 + (TA)n Simple_repeat Simple_repeat 2 93 0 1737 114 107 4 chr10 30008121 30008393 -115580895 - AluSx SINE Alu -12 300 1 566 253 15 64 chr10 30009051 30009253 -115580035 - MIR SINE MIR -58 204 13 2021 146 3 3 chr10 30009561 30009856 -115579432 + AluJb SINE Alu 1 295 -17 797 203 122 10 chr10 30010743 30010940 -115578348 - MIR SINE MIR -26 236 18 2208 107 0 0 chr10 30010956 30011276 -115578012 - AluY SINE Alu 0 320 1 309 257 78 49 chr10 30011314 30011559 -115577729 + L1ME4a LINE L1 5869 6120 -1 2197 123 10 0 chr10 30011762 30012063 -115577225 - AluSx SINE Alu -8 304 1 1714 160 35 7 chr10 30013058 30013340 -115575948 - AluJb SINE Alu -22 290 1 1645 105 9 105 chr10 30013351 30013408 -115575880 - L1MB4 LINE L1 0 6180 6119 1751 143 16 50 chr10 30013408 30013730 -115575558 + AluJo SINE Alu 1 311 -1 1645 105 9 105 chr10 30013730 30013909 -115575379 - L1MB4 LINE L1 -61 6119 5983 1943 161 3 0 chr10 30013909 30014208 -115575080 - AluJb SINE Alu -12 300 1 1645 105 9 105 chr10 30014208 30014304 -115574984 - L1MB4 LINE L1 -197 5983 5879 1006 180 43 36 chr10 30014304 30014526 -115574762 - MLT2B1 LTR ERVL -10 510 283 2164 97 3 3 chr10 30015619 30015907 -115573381 - AluSx SINE Alu -16 296 9 1405 170 51 16 chr10 30016248 30016486 -115572802 + MER33 DNA MER1_type 1 243 -2342 1678 160 7 14 chr10 30016486 30016780 -115572508 - AluJb SINE Alu -20 292 1 1405 170 51 16 chr10 30016780 30016860 -115572428 + MER33 DNA MER1_type 243 319 -5 434 316 30 86 chr10 30016877 30017146 -115572142 - MIR SINE MIR 0 262 9 1143 133 0 0 chr10 30017983 30018291 -115570997 + (TCCA)n Simple_repeat Simple_repeat 1 308 0 185 358 32 0 chr10 30018292 30018387 -115570901 - L2 LINE L2 -49 3264 3167 1811 168 6 16 chr10 30018405 30018721 -115570567 - MER4D LTR ERV1 -11 892 580 479 131 0 91 chr10 30018772 30018903 -115570385 - MER4E LTR ERV1 -589 283 62 * 1603 142 77 4 chr10 30018889 30019163 -115570125 - MER49 LTR ERV1 -629 294 1 372 314 48 72 chr10 30019300 30019328 -115569960 - L2 LINE L2 -345 2969 2942 3766 141 51 2 chr10 30019328 30019931 -115569357 + MER41B LTR ERV1 2 634 -1 372 314 48 72 chr10 30019931 30020236 -115569052 - L2 LINE L2 -372 2942 2644 514 239 131 11 chr10 30020968 30021144 -115568144 + LTR33 LTR ERVL 5 201 -320 1590 154 22 11 chr10 30021148 30021420 -115567868 + AluJo SINE Alu 5 279 -33 318 216 0 0 chr10 30021462 30021536 -115567752 + G-rich Low_complexity Low_complexity 2 75 0 276 188 0 0 chr10 30021554 30021623 -115567665 + A-rich Low_complexity Low_complexity 1 69 0 312 294 103 0 chr10 30021634 30021760 -115567528 + L1MCa LINE L1 1162 1300 -5126 3977 194 44 19 chr10 30022038 30023015 -115566273 + L1PA11 LINE L1 3161 4161 -1985 832 144 104 146 chr10 30023421 30023449 -115565839 + L1MB2 LINE L1 5469 5497 -778 6263 118 4 0 chr10 30023449 30024567 -115564721 + L1PA11 LINE L1 5043 6174 0 832 144 104 146 chr10 30024567 30024859 -115564429 + L1MB2 LINE L1 5497 5775 -500 1900 157 9 15 chr10 30024966 30025298 -115563990 + L1MB2 LINE L1 5835 6164 -7 939 259 91 3 chr10 30025305 30025602 -115563686 - L2 LINE L2 -609 2705 2383 1220 271 49 13 chr10 30025603 30026100 -115563188 + ERVL LTR ERVL 4285 4829 -825 1379 122 0 69 chr10 30026180 30026316 -115562972 - L1M2 LINE L1 -559 5741 5597 2482 60 0 3 chr10 30026316 30026616 -115562672 - AluY SINE Alu -12 299 1 2330 102 3 0 chr10 30026616 30026921 -115562367 - AluSg SINE Alu -4 306 1 1379 122 0 69 chr10 30026921 30027028 -115562260 - L1M2 LINE L1 -701 5599 5514 2334 97 0 10 chr10 30027029 30027328 -115561960 + AluSx SINE Alu 2 297 -15 738 143 0 0 chr10 30027359 30027471 -115561817 - AluJb SINE Alu -9 303 192 1749 144 0 0 chr10 30027861 30028118 -115561170 + Tigger3(Golem) DNA MER2_type 2769 3025 -4 1053 236 91 15 chr10 30028445 30028843 -115560445 - L1M4 LINE L1 -1432 4714 4287 233 239 0 15 chr10 30028840 30028907 -115560381 - L1MC/D LINE L1 -707 5535 5470 * 328 144 83 23 chr10 30029099 30029145 -115560143 + (TATAG)n Simple_repeat Simple_repeat 1 43 -97 410 76 197 0 chr10 30029145 30029211 -115560077 + MADE1 DNA Mariner 2 80 0 328 144 83 23 chr10 30029211 30029296 -115559992 + (TATAG)n Simple_repeat Simple_repeat 43 140 0 4568 164 32 66 chr10 30029297 30029803 -115559485 - L1MB1 LINE L1 -65 6103 5581 2477 82 0 0 chr10 30029803 30030109 -115559179 - AluY SINE Alu -5 306 1 4568 164 32 66 chr10 30030109 30030289 -115558999 - L1MB1 LINE L1 -587 5581 5396 264 30 0 0 chr10 30030289 30030322 -115558966 + (TG)n Simple_repeat Simple_repeat 2 34 0 4568 164 32 66 chr10 30030322 30031453 -115557835 - L1MB1 LINE L1 -772 5396 4358 1203 292 63 60 chr10 30031579 30031876 -115557412 - L1M3d LINE L1 -5230 661 366 2296 51 27 0 chr10 30031876 30032172 -115557116 - AluY SINE Alu -7 304 1 1203 292 63 60 chr10 30032172 30032525 -115556763 - L1M3d LINE L1 -5525 366 9 189 0 0 0 chr10 30032533 30032554 -115556734 + (TC)n Simple_repeat Simple_repeat 2 22 0 * 333 0 0 0 chr10 30032553 30032590 -115556698 + (TG)n Simple_repeat Simple_repeat 2 38 0 1822 157 34 7 chr10 30032592 30032885 -115556403 - AluSx SINE Alu -11 301 1 1543 169 13 91 chr10 30032888 30033178 -115556110 - L1MC/D LINE L1 -743 5403 5203 2155 145 24 0 chr10 30033178 30033516 -115555772 - MER7A DNA MER2_type 0 346 3 1543 169 13 91 chr10 30033516 30033819 -115555469 - L1MC/D LINE L1 -943 5203 4878 280 267 0 0 chr10 30033965 30034051 -115555237 - MIR SINE MIR -2 260 175 2272 89 20 0 chr10 30034196 30034489 -115554799 + AluSp SINE Alu 1 299 -14 580 216 86 86 chr10 30034511 30034849 -115554439 - L1MC5 LINE L1 -60 7901 7564 554 154 0 0 chr10 30034945 30035036 -115554252 + L1MB3 LINE L1 5764 5854 -329 2510 168 13 49 chr10 30035193 30035210 -115554078 + L1MA6 LINE L1 5763 5779 -521 2053 143 3 10 chr10 30035210 30035517 -115553771 + AluSx SINE Alu 1 305 -7 2510 168 13 49 chr10 30035517 30035529 -115553759 + L1MA6 LINE L1 5779 5790 -510 270 81 0 0 chr10 30035529 30035566 -115553722 + (CA)n Simple_repeat Simple_repeat 2 38 0 2510 168 13 49 chr10 30035566 30035726 -115553562 + L1MA6 LINE L1 5790 5954 -346 2158 74 0 45 chr10 30035726 30036036 -115553252 + AluY SINE Alu 1 296 -15 2510 168 13 49 chr10 30036036 30036183 -115553105 + L1MA6 LINE L1 5954 6105 -195 2399 124 14 8 chr10 30036183 30036545 -115552743 - THE1B LTR MaLR 0 364 1 2510 168 13 49 chr10 30036545 30036754 -115552534 + L1MA6 LINE L1 6105 6291 -9 865 118 22 7 chr10 30037461 30037596 -115551692 + FLAM_C SINE Alu 7 143 0 29 28 0 0 chr10 30037713 30037749 -115551539 + AT_rich Low_complexity Low_complexity 1 36 0 1464 167 0 20 chr10 30038835 30039086 -115550202 - AluJb SINE Alu -2 310 65 1375 230 92 72 chr10 30039605 30039994 -115549294 + L1M3d LINE L1 684 1064 -4827 2032 147 0 10 chr10 30039994 30040293 -115548995 + AluJo SINE Alu 1 296 -16 1375 230 92 72 chr10 30040293 30040401 -115548887 + L1M3d LINE L1 1064 1168 -4723 1906 144 18 4 chr10 30040401 30040727 -115548561 + AluSx SINE Alu 1 330 0 1375 230 92 72 chr10 30040727 30040827 -115548461 + L1M3d LINE L1 1168 1295 -4596 1839 207 70 27 chr10 30040831 30041271 -115548017 + LTR2B LTR ERV1 32 490 0 3310 262 37 26 chr10 30041272 30042059 -115547229 + L1M1 LINE L1 2542 3319 -4246 2113 129 7 0 chr10 30042059 30042378 -115546910 - AluSx SINE Alu 0 321 1 3310 262 37 26 chr10 30042378 30042699 -115546589 + L1M1 LINE L1 3319 3635 -3930 2262 109 0 3 chr10 30042699 30043002 -115546286 - AluSx SINE Alu -10 302 1 3310 262 37 26 chr10 30043002 30043926 -115545362 + L1M1 LINE L1 3635 4593 -2972 913 159 0 6 chr10 30043930 30044100 -115545188 + L1M1 LINE L1 5634 5802 -1763 2233 89 18 0 chr10 30044101 30044381 -115544907 + AluSg SINE Alu 1 285 -25 609 144 0 0 chr10 30044694 30044791 -115544497 - FRAM SINE Alu -11 165 69 738 129 11 140 chr10 30044793 30044971 -115544317 - MER20 DNA MER1_type -64 155 1 1747 199 3 3 chr10 30045061 30045363 -115543925 - AluJb SINE Alu -8 304 3 2369 98 0 0 chr10 30045446 30045753 -115543535 - AluY SINE Alu -4 307 1 1073 154 36 64 chr10 30045755 30045975 -115543313 - AluJo SINE Alu -17 295 82 1477 157 68 6 chr10 30045975 30046288 -115543000 - L1PA16 LINE L1 0 6154 5801 2094 140 0 7 chr10 30046329 30046629 -115542659 + AluSx SINE Alu 1 298 -14 2911 160 39 30 chr10 30047138 30047681 -115541607 - MLT2B3 LTR ERVL -6 548 1 1693 129 0 24 chr10 30047681 30047936 -115541352 + AluSx SINE Alu 48 296 -16 863 132 0 0 chr10 30047938 30048052 -115541236 + AluSq/x SINE Alu 1 114 -198 288 158 0 0 chr10 30048053 30048110 -115541178 + A-rich Low_complexity Low_complexity 1 57 0 189 0 0 0 chr10 30048183 30048204 -115541084 + (T)n Simple_repeat Simple_repeat 1 21 0 2488 21 45 3 chr10 30048628 30048916 -115540372 - AluY SINE Alu -11 300 1 2364 86 0 7 chr10 30049568 30049870 -115539418 + AluY SINE Alu 1 300 -11 1546 97 21 8 chr10 30049877 30050114 -115539174 + LTR7 LTR ERV1 211 450 0 451 300 56 50 chr10 30050301 30050709 -115538579 - L1ME4a LINE L1 -153 5968 5562 2361 85 3 0 chr10 30050718 30051012 -115538276 - AluSp SINE Alu -18 295 1 2230 91 0 17 chr10 30051064 30051360 -115537928 - AluSx SINE Alu -9 303 13 484 254 7 36 chr10 30052118 30052256 -115537032 - MER94 DNA DNA 0 134 1 502 191 197 0 chr10 30053087 30053234 -115536054 - MIR SINE MIR -1 261 86 1979 107 70 4 chr10 30053478 30053750 -115535538 - AluSg SINE Alu -20 290 1 405 200 0 0 chr10 30053779 30053849 -115535439 + AluJ/FLAM SINE Alu 3 72 -230 1654 286 17 11 chr10 30053868 30054402 -115534886 - LTR48B LTR ERV1 -2 642 106 1284 129 0 0 chr10 30054759 30054930 -115534358 - AluSx SINE Alu -141 171 1 1271 163 0 5 chr10 30054930 30055133 -115534155 + AluJo SINE Alu 102 303 -9 225 0 0 0 chr10 30056368 30056393 -115532895 + (A)n Simple_repeat Simple_repeat 1 25 0 21 0 0 0 chr10 30056715 30056736 -115532552 + AT_rich Low_complexity Low_complexity 1 21 0 2400 55 0 10 chr10 30058500 30058789 -115530499 + AluY SINE Alu 18 303 -8 307 255 81 36 chr10 30059261 30059387 -115529901 + L1ME LINE L1 1 131 -5939 452 200 24 0 chr10 30059388 30059473 -115529815 + FAM SINE Alu 1 78 -98 410 237 11 32 chr10 30059505 30059598 -115529690 + FAM SINE Alu 81 171 -4 1674 199 0 19 chr10 30059781 30060097 -115529191 - AluJo SINE Alu -2 310 1 497 261 82 0 chr10 30060178 30060312 -115528976 + L2 LINE L2 3168 3312 -1 1975 149 7 0 chr10 30060706 30061011 -115528277 - AluSx SINE Alu 0 307 1 309 51 0 0 chr10 30061376 30061415 -115527873 + (TG)n Simple_repeat Simple_repeat 2 40 0 187 248 143 0 chr10 30061702 30061807 -115527481 - MIR SINE MIR -1 261 142 1958 159 0 3 chr10 30061810 30062099 -115527189 - AluJo SINE Alu -24 288 1 2259 98 7 10 chr10 30062274 30062581 -115526707 - AluSq SINE Alu -7 306 1 2172 117 0 26 chr10 30063047 30063354 -115525934 + AluSx SINE Alu 1 299 -13 1406 234 54 22 chr10 30063994 30064362 -115524926 - MLT1F LTR MaLR 0 542 163 832 29 0 39 chr10 30064364 30064467 -115524821 - AluY SINE Alu -16 295 197 536 243 181 7 chr10 30064467 30064611 -115524677 - MLT1F LTR MaLR -371 171 3 307 306 52 17 chr10 30064683 30064856 -115524432 + L1M4 LINE L1 2909 3087 -3059 915 192 6 12 chr10 30064865 30065032 -115524256 + FRAM SINE Alu 1 166 0 1845 90 0 90 chr10 30065033 30065321 -115523967 - AluY SINE Alu -49 262 1 244 242 11 33 chr10 30065375 30065466 -115523822 + L1M4 LINE L1 3202 3290 -2856 1060 163 0 11 chr10 30065500 30065678 -115523610 + FRAM SINE Alu 1 176 0 1201 110 0 0 chr10 30065760 30065923 -115523365 + AluSg/x SINE Alu 144 306 -6 432 0 0 0 chr10 30065962 30066010 -115523278 + (CA)n Simple_repeat Simple_repeat 1 48 0 329 222 137 43 chr10 30066075 30066192 -115523096 - L2 LINE L2 0 3313 3186 2170 106 7 13 chr10 30066221 30066523 -115522765 - AluSx SINE Alu -12 300 1 2617 53 0 0 chr10 30066966 30067270 -115522018 + AluY SINE Alu 1 304 -7 1905 153 13 3 chr10 30067383 30067691 -115521597 + AluJb SINE Alu 2 312 0 2503 32 6 41 chr10 30067990 30068304 -115520984 + AluY SINE Alu 1 303 -8 1683 168 68 7 chr10 30068416 30068708 -115520580 - AluJo SINE Alu -2 310 1 349 329 7 0 chr10 30068761 30068898 -115520390 - LTR67 LTR ERVL -2 555 418 228 83 62 0 chr10 30069285 30069333 -115519955 + (TA)n Simple_repeat Simple_repeat 1 51 0 1901 163 0 10 chr10 30069652 30069952 -115519336 + AluSx SINE Alu 1 297 -15 675 306 41 18 chr10 30070268 30070608 -115518680 - L2 LINE L2 -104 3209 2862 2697 98 3 11 chr10 30070670 30071037 -115518251 + THE1B LTR MaLR 1 364 0 1898 146 9 19 chr10 30071258 30071573 -115517715 + AluJo SINE Alu 1 312 0 188 282 155 0 chr10 30072377 30072448 -115516840 - MIR SINE MIR -150 112 31 887 121 0 0 chr10 30072567 30072691 -115516597 + FRAM SINE Alu 47 170 -6 225 368 88 7 chr10 30072869 30073005 -115516283 + L2 LINE L2 3115 3261 -11 870 249 61 9 chr10 30073155 30073368 -115515920 + MER58A DNA MER1_type 1 224 0 388 304 30 15 chr10 30073382 30073517 -115515771 - L2 LINE L2 0 3272 3136 1296 110 75 35 chr10 30073565 30073792 -115515496 + MER46A DNA MER2_type 1 236 0 1619 186 3 10 chr10 30073851 30074141 -115515147 + AluJb SINE Alu 1 288 -24 207 0 0 0 chr10 30074144 30074167 -115515121 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr10 30074173 30074195 -115515093 + AT_rich Low_complexity Low_complexity 1 22 0 235 365 109 21 chr10 30074318 30074510 -115514778 - L2 LINE L2 -337 2977 2769 2198 117 0 10 chr10 30074547 30074847 -115514441 + AluSx SINE Alu 1 297 -15 1299 102 0 0 chr10 30074868 30075034 -115514254 + AluSg/x SINE Alu 133 298 -12 406 333 61 21 chr10 30075047 30075326 -115513962 - L2 LINE L2 -798 2516 2227 21 36 0 0 chr10 30076014 30076042 -115513246 + AT_rich Low_complexity Low_complexity 1 28 0 2573 59 10 0 chr10 30076042 30076347 -115512941 + AluY SINE Alu 1 308 -3 868 264 24 0 chr10 30076378 30076590 -115512698 - AluJo SINE Alu -92 220 4 2315 106 3 3 chr10 30077223 30077535 -115511753 + AluSx SINE Alu 1 312 0 434 187 44 0 chr10 30078048 30078139 -115511149 - L1ME3A LINE L1 -12 6158 6064 2264 103 0 7 chr10 30078447 30078747 -115510541 - AluSc SINE Alu -11 298 1 723 181 8 0 chr10 30079908 30080035 -115509253 - FLAM_A SINE Alu -5 128 1 1760 138 4 14 chr10 30080651 30080927 -115508361 + AluJo SINE Alu 39 311 -1 1187 120 0 0 chr10 30081503 30081670 -115507618 - AluY SINE Alu -11 300 134 2398 78 0 0 chr10 30082139 30082435 -115506853 - AluY SINE Alu -15 296 1 401 167 0 26 chr10 30082632 30082710 -115506578 + LTR33 LTR ERVL 446 521 0 2204 100 3 0 chr10 30083086 30083413 -115505875 + AluSp SINE Alu 2 329 0 1064 261 4 11 chr10 30083413 30083662 -115505626 - MIR SINE MIR -8 254 5 2105 122 0 0 chr10 30083864 30084152 -115505136 + AluSx SINE Alu 23 310 -2 243 253 47 93 chr10 30084327 30084432 -115504856 - MER5A DNA MER1_type -1 188 91 1682 166 155 59 chr10 30084432 30084547 -115504741 + MLT1D LTR MaLR 3 106 -399 2076 113 74 0 chr10 30084547 30084831 -115504457 + AluSq SINE Alu 1 305 -8 1682 166 155 59 chr10 30084831 30085172 -115504116 + MLT1D LTR MaLR 106 503 -2 243 253 47 93 chr10 30085172 30085216 -115504072 - MER5A DNA MER1_type -98 91 46 3464 155 4 6 chr10 30085216 30085740 -115503548 + MER1A DNA MER1_type 1 523 -4 192 217 101 43 chr10 30086054 30086072 -115503216 + MIR SINE MIR 79 95 -167 1717 225 14 100 chr10 30086072 30086455 -115502833 - LTR26B LTR ERV1 -3 528 113 1691 172 0 27 chr10 30086455 30086752 -115502536 + AluJo SINE Alu 1 289 -23 189 0 0 0 chr10 30086755 30086776 -115502512 + (TAAA)n Simple_repeat Simple_repeat 4 24 0 1717 225 14 100 chr10 30086776 30086966 -115502322 - LTR26B LTR ERV1 -420 111 1 192 217 101 43 chr10 30086966 30087016 -115502272 + MIR SINE MIR 95 151 -111 309 285 85 8 chr10 30087069 30087199 -115502089 + L1M4 LINE L1 3850 3989 -2157 2074 136 0 10 chr10 30087354 30087649 -115501639 - AluSx SINE Alu -20 292 1 25 31 0 0 chr10 30088362 30088394 -115500894 + AT_rich Low_complexity Low_complexity 1 32 0 842 139 0 16 chr10 30088603 30088732 -115500556 + FLAM_C SINE Alu 1 127 -16 2112 131 20 0 chr10 30088849 30089147 -115500141 - AluSx SINE Alu -6 306 3 233 216 0 27 chr10 30089381 30089455 -115499833 + CT-rich Low_complexity Low_complexity 2 73 0 2134 125 0 3 chr10 30089795 30090092 -115499196 - AluSx SINE Alu -16 296 1 2233 104 0 0 chr10 30090667 30090954 -115498334 + AluY SINE Alu 1 287 -24 5600 132 15 26 chr10 30090956 30091803 -115497485 - L1PA16 LINE L1 -4 6162 5325 1610 195 21 7 chr10 30091803 30092090 -115497198 - AluJo SINE Alu -21 291 1 5600 132 15 26 chr10 30092090 30092215 -115497073 - L1PA16 LINE L1 -841 5325 5200 2871 102 9 47 chr10 30092264 30092312 -115496976 + MER57B LTR ERV1 1 49 -385 2143 89 34 3 chr10 30092312 30092604 -115496684 - AluSq SINE Alu -12 301 1 2871 102 9 47 chr10 30092604 30093006 -115496282 + MER57B LTR ERV1 49 434 0 237 307 87 31 chr10 30094299 30094368 -115494920 - L2 LINE L2 -5 3308 3244 2504 75 0 3 chr10 30094368 30094673 -115494615 + AluSp SINE Alu 1 304 -9 237 307 87 31 chr10 30094673 30094730 -115494558 - L2 LINE L2 -69 3244 3175 2154 159 75 31 chr10 30094825 30095303 -115493985 - MLT1D LTR MaLR 0 505 7 204 368 78 19 chr10 30095610 30095868 -115493420 - L2 LINE L2 -710 2604 2332 895 218 6 6 chr10 30095882 30096047 -115493241 + MER45A DNA AcHobo 1 165 -13 2581 82 62 3 chr10 30096576 30096930 -115492358 - THE1C LTR MaLR 0 375 1 482 252 0 0 chr10 30097084 30097195 -115492093 + FRAM SINE Alu 1 111 -65 246 211 18 0 chr10 30097283 30097340 -115491948 + AluJ/monomer SINE Alu 244 301 -1 2205 117 0 0 chr10 30097417 30097715 -115491573 + AluSx SINE Alu 1 298 -14 24 0 0 0 chr10 30097715 30097739 -115491549 + AT_rich Low_complexity Low_complexity 1 24 0 1976 144 23 0 chr10 30098173 30098478 -115490810 + AluSx SINE Alu 1 312 0 1731 167 17 20 chr10 30098496 30098795 -115490493 + AluJo SINE Alu 3 300 -12 918 98 17 23 chr10 30098821 30098995 -115490293 + (GAAA)n Simple_repeat Simple_repeat 4 176 0 655 264 73 41 chr10 30099156 30099541 -115489747 + MLT1J2 LTR MaLR 22 409 0 1163 220 0 0 chr10 30099629 30099856 -115489432 - AluJo SINE Alu -7 305 79 2629 45 0 6 chr10 30100156 30100467 -115488821 - AluY SINE Alu -2 309 1 1909 130 46 0 chr10 30100467 30100751 -115488537 - AluSx SINE Alu -14 298 2 643 278 144 17 chr10 30100766 30101183 -115488105 - L1MC/D LINE L1 -2081 5727 5258 1936 139 39 32 chr10 30101350 30101660 -115487628 - AluSx SINE Alu 0 312 1 821 103 0 0 chr10 30101665 30101772 -115487516 - AluSq/x SINE Alu -205 107 1 674 271 33 19 chr10 30101917 30102131 -115487157 - U3 snRNA snRNA 0 217 1 818 162 6 0 chr10 30102210 30102389 -115486899 + CT-rich Low_complexity Low_complexity 1 180 0 695 170 9 6 chr10 30102409 30102770 -115486518 + CT-rich Low_complexity Low_complexity 1 362 0 255 125 0 0 chr10 30103337 30103377 -115485911 + (TGAA)n Simple_repeat Simple_repeat 2 41 0 2044 134 0 26 chr10 30103480 30103793 -115485495 + AluSx SINE Alu 6 310 -2 1695 189 10 3 chr10 30103966 30104268 -115485020 - AluJo SINE Alu -8 304 1 205 340 53 0 chr10 30104543 30104637 -115484651 + L2 LINE L2 3196 3294 -19 2005 135 0 4 chr10 30105174 30105455 -115483833 + AluSx SINE Alu 5 284 -28 976 204 0 57 chr10 30105474 30105704 -115483584 + MER20 DNA MER1_type 3 219 0 755 187 0 0 chr10 30106192 30106315 -115482973 + FLAM_A SINE Alu 1 123 -10 979 238 63 3 chr10 30106320 30106623 -115482665 - L1MC/D LINE L1 -970 5176 4856 2297 92 6 25 chr10 30106633 30106949 -115482339 + AluSp SINE Alu 1 310 -3 449 180 31 11 chr10 30106995 30107143 -115482145 + L1MC/D LINE L1 5183 5333 -838 724 199 8 0 chr10 30107143 30107274 -115482014 + FLAM_A SINE Alu 1 132 -1 1923 104 18 0 chr10 30107313 30107592 -115481696 + L1MC/D LINE L1 5315 5598 -735 280 114 0 0 chr10 30107592 30107636 -115481652 + Alu SINE Alu 254 297 -3 2296 120 0 0 chr10 30107746 30108055 -115481233 + AluSg SINE Alu 1 309 -1 2180 114 7 0 chr10 30108392 30108698 -115480590 - AluSx SINE Alu -2 310 3 2964 155 27 12 chr10 30108881 30109392 -115479896 + Tigger1 DNA MER2_type 1 519 -1899 4900 151 42 23 chr10 30109393 30109982 -115479306 - L1PB4 LINE L1 -76 6080 5503 1432 171 77 21 chr10 30109982 30110268 -115479020 - AluJo SINE Alu -10 302 1 4900 151 42 23 chr10 30110268 30110279 -115479009 - L1PB4 LINE L1 -653 5503 5494 2334 73 0 36 chr10 30110279 30110581 -115478707 - AluY SINE Alu -18 293 3 4900 151 42 23 chr10 30110581 30111039 -115478249 - L1PB4 LINE L1 -662 5494 4988 1561 125 27 0 chr10 30111039 30111263 -115478025 + MER30 DNA MER1_type 1 230 0 4900 151 42 23 chr10 30111263 30111544 -115477744 - L1PB4 LINE L1 -1168 4988 4714 3135 112 24 4 chr10 30111544 30111999 -115477289 + Tigger1 DNA MER2_type 1950 2413 -5 1211 255 105 20 chr10 30112060 30112452 -115476836 + MLT1J1 LTR MaLR 17 441 -5 2101 111 31 3 chr10 30112474 30112763 -115476525 - AluSx SINE Alu -15 297 1 492 318 130 12 chr10 30112769 30113099 -115476189 - L1MC4a LINE L1 -1930 5878 5510 504 218 79 71 chr10 30113403 30113832 -115475456 - MLT1H LTR MaLR 0 530 60 535 271 20 39 chr10 30113852 30114055 -115475233 - HERV16 LTR ERVL -1340 3656 3458 887 180 0 0 chr10 30114060 30114210 -115475078 - FRAM SINE Alu -3 173 24 1949 132 48 0 chr10 30114551 30114840 -115474448 + AluSx SINE Alu 1 303 -9 565 311 85 9 chr10 30114969 30115443 -115473845 - HERV16 LTR ERVL -2440 3214 2675 2286 122 3 0 chr10 30115449 30115753 -115473535 - AluSx SINE Alu -7 305 1 280 250 87 17 chr10 30115982 30116154 -115473134 - L1M1 LINE L1 -835 5468 5285 21 95 0 0 chr10 30116172 30116235 -115473053 + AT_rich Low_complexity Low_complexity 1 63 0 22 70 0 0 chr10 30116245 30116288 -115473000 + AT_rich Low_complexity Low_complexity 1 43 0 37 110 0 0 chr10 30116354 30116517 -115472771 + AT_rich Low_complexity Low_complexity 1 163 0 589 333 79 33 chr10 30116602 30116690 -115472598 + L2 LINE L2 1834 1916 -1398 2197 128 0 0 chr10 30116690 30116987 -115472301 + AluSx SINE Alu 1 297 -15 589 333 79 33 chr10 30116987 30117417 -115471871 + L2 LINE L2 1916 2376 -938 485 266 39 7 chr10 30117417 30117571 -115471717 + L2 LINE L2 1768 1926 -1388 1241 190 33 94 chr10 30117584 30117915 -115471373 - AluJo SINE Alu -1 311 1 263 318 48 21 chr10 30117920 30118109 -115471179 + L2 LINE L2 2842 3035 -237 1634 178 46 4 chr10 30119166 30119447 -115469841 + AluJo SINE Alu 1 293 -19 1347 307 30 22 chr10 30120011 30120690 -115468598 + ERVL LTR ERVL 2154 2852 -2633 1822 166 7 7 chr10 30120708 30120997 -115468291 + AluJo SINE Alu 1 289 -23 409 270 20 59 chr10 30121016 30121168 -115468120 + ERVL LTR ERVL 2949 3094 -2560 1262 288 30 30 chr10 30121198 30121664 -115467624 + ERVL LTR ERVL 3280 3745 -2019 2631 186 20 5 chr10 30121734 30122181 -115467107 - MER82 DNA MER2_type -1 652 199 332 102 0 0 chr10 30122268 30122317 -115466971 - MLT2B3 LTR ERVL -8 512 464 434 108 17 42 chr10 30122317 30122437 -115466851 + (TA)n Simple_repeat Simple_repeat 2 118 0 936 227 86 39 chr10 30122519 30122775 -115466513 - MLT2B3 LTR ERVL -286 268 1 608 266 0 0 chr10 30123044 30123183 -115466105 - MER82 DNA MER2_type -514 139 1 3028 92 34 75 chr10 30123507 30124239 -115465049 - MER51A LTR ERV1 0 634 1 1062 307 60 41 chr10 30124241 30124952 -115464336 + L2 LINE L2 1846 2570 -744 2111 102 20 36 chr10 30125388 30125692 -115463596 + AluSx SINE Alu 1 299 -13 1813 136 7 52 chr10 30126508 30126634 -115462654 + AluJo SINE Alu 5 135 -177 186 43 0 0 chr10 30126634 30126657 -115462631 + (TA)n Simple_repeat Simple_repeat 1 23 0 1813 136 7 52 chr10 30126657 30126838 -115462450 + AluJo SINE Alu 135 298 -14 312 27 0 0 chr10 30126847 30126884 -115462404 + (CA)n Simple_repeat Simple_repeat 2 38 0 365 358 81 11 chr10 30127258 30127529 -115461759 + L1MC/D LINE L1 5454 5743 -2065 235 254 15 15 chr10 30127559 30127626 -115461662 - MIR SINE MIR -24 238 172 338 261 0 9 chr10 30127638 30127659 -115461629 - L1MA4A LINE L1 -2 6301 5969 2217 106 0 29 chr10 30127659 30127971 -115461317 - AluSx SINE Alu -9 303 1 4956 127 20 1 chr10 30127971 30128728 -115460560 - L1PB4 LINE L1 -6 6150 5380 294 280 30 30 chr10 30128753 30128853 -115460435 - MIR SINE MIR -120 142 43 2368 84 0 47 chr10 30128861 30129183 -115460105 - AluSq SINE Alu -6 307 1 2209 128 0 0 chr10 30129349 30129647 -115459641 + AluSx SINE Alu 1 298 -14 1851 143 49 0 chr10 30129725 30130011 -115459277 + AluSq SINE Alu 1 300 -13 258 33 0 0 chr10 30130106 30130136 -115459152 - LTR6A LTR ERV1 -462 102 73 1116 137 0 19 chr10 30131209 30131370 -115457918 - FRAM SINE Alu -24 152 1 2106 134 0 0 chr10 30131389 30131680 -115457608 + AluSx SINE Alu 1 291 -21 475 350 30 18 chr10 30131748 30131998 -115457290 - MIR SINE MIR -9 253 3 718 179 32 0 chr10 30132456 30132579 -115456709 + AluJo/FLAM SINE Alu 1 127 -175 1433 175 52 4 chr10 30132581 30132850 -115456438 + AluJo SINE Alu 1 282 -30 1683 193 17 0 chr10 30133075 30133370 -115455918 - AluJb SINE Alu -12 300 1 210 105 0 0 chr10 30133381 30133419 -115455869 + (TTTC)n Simple_repeat Simple_repeat 3 40 0 1835 142 0 62 chr10 30133421 30133730 -115455558 - AluJb SINE Alu -22 290 1 2397 48 45 0 chr10 30133803 30134092 -115455196 + AluY SINE Alu 1 302 -9 2379 98 0 13 chr10 30134712 30135028 -115454260 - AluSx SINE Alu 0 312 1 258 188 232 0 chr10 30135209 30135278 -115454010 - MLT1J2 LTR MaLR 0 450 366 577 245 177 10 chr10 30135349 30135541 -115453747 - MLT1J2 LTR MaLR -207 243 20 2139 179 6 0 chr10 30135589 30135953 -115453335 + MER47A DNA MER2_type 1 366 0 243 240 23 154 chr10 30136575 30136796 -115452492 - 7SK RNA RNA -1 192 1 1753 159 13 40 chr10 30136898 30137199 -115452089 + AluJo SINE Alu 7 299 -13 1639 168 50 18 chr10 30137571 30137730 -115451558 - AluJo SINE Alu -23 289 116 270 0 0 0 chr10 30137730 30137760 -115451528 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1639 168 50 18 chr10 30137760 30137880 -115451408 - AluJo SINE Alu -196 116 1 612 250 28 6 chr10 30138320 30138496 -115450792 + MIR SINE MIR 13 192 -70 1938 100 32 11 chr10 30138501 30138780 -115450508 + AluSq SINE Alu 5 289 -24 188 316 0 26 chr10 30138802 30138878 -115450410 + MIR SINE MIR 185 258 -4 2402 85 0 0 chr10 30138958 30139252 -115450036 + AluSp SINE Alu 1 294 -19 185 342 177 13 chr10 30139403 30139561 -115449727 + L2 LINE L2 2573 2756 -558 226 189 176 14 chr10 30139776 30139850 -115449438 + MER5A DNA MER1_type 24 109 -80 1603 160 0 107 chr10 30139892 30140061 -115449227 - AluSx SINE Alu 0 302 185 2032 123 0 33 chr10 30140061 30140361 -115448927 - AluSx SINE Alu -22 290 1 1603 160 0 107 chr10 30140361 30140529 -115448759 - AluSx SINE Alu -117 185 1 1905 172 7 0 chr10 30140884 30141214 -115448074 + AluSx SINE Alu 1 312 0 25 0 0 0 chr10 30141371 30141396 -115447892 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr10 30141457 30141480 -115447808 + AT_rich Low_complexity Low_complexity 1 23 0 2041 120 10 36 chr10 30141503 30141811 -115447477 - AluSx SINE Alu -12 300 1 227 284 25 0 chr10 30142079 30142160 -115447128 + L1ME LINE L1 5533 5615 -506 1700 173 4 0 chr10 30142186 30142458 -115446830 + AluJo SINE Alu 28 300 -12 2172 106 0 0 chr10 30142666 30142950 -115446338 + AluSx SINE Alu 3 286 -26 337 294 40 8 chr10 30143214 30143340 -115445948 - MIR SINE MIR -72 190 61 2146 118 0 7 chr10 30144492 30144789 -115444499 + AluSx SINE Alu 1 295 -17 2107 156 72 33 chr10 30145008 30145463 -115443825 - MLT1D LTR MaLR -26 479 7 204 368 78 19 chr10 30145770 30146028 -115443260 - L2 LINE L2 -710 2604 2332 895 218 6 6 chr10 30146042 30146207 -115443081 + MER45A DNA AcHobo 1 165 -13 2581 82 62 3 chr10 30146736 30147090 -115442198 - THE1C LTR MaLR 0 375 1 482 252 0 0 chr10 30147244 30147355 -115441933 + FRAM SINE Alu 1 111 -65 246 211 18 0 chr10 30147443 30147500 -115441788 + AluJ/monomer SINE Alu 244 301 -1 2327 98 0 3 chr10 30147577 30147874 -115441414 + AluSx SINE Alu 1 296 -16 273 278 189 39 chr10 30148166 30148346 -115440942 - L2 LINE L2 -516 2798 2592 1893 176 0 0 chr10 30148377 30148678 -115440610 - AluSx SINE Alu -11 301 1 270 247 86 74 chr10 30148854 30149016 -115440272 - L1MC5 LINE L1 -30 7931 7768 2161 126 0 3 chr10 30149031 30149332 -115439956 - AluSq SINE Alu -13 300 1 1951 117 3 27 chr10 30149883 30150183 -115439105 + AluSx SINE Alu 1 293 -19 3815 124 116 9 chr10 30150190 30150874 -115438414 + MER7A DNA MER2_type 2272 336 0 419 263 53 29 chr10 30151063 30151234 -115438054 - MER5B DNA MER1_type -1 177 3 308 301 123 21 chr10 30152265 30152501 -115436787 - L2 LINE L2 -5 3308 3049 1899 80 52 52 chr10 30152585 30152874 -115436414 + AluY SINE Alu 1 289 -22 530 230 182 10 chr10 30153310 30153519 -115435769 - MIR SINE MIR -10 252 8 618 261 11 27 chr10 30153529 30153713 -115435575 + MER5A DNA MER1_type 9 189 0 14588 124 42 6 chr10 30155639 30155976 -115433312 - Tigger1 DNA MER2_type -1 2417 2093 2197 114 3 3 chr10 30155976 30156274 -115433014 + AluSx SINE Alu 1 298 -14 14588 124 42 6 chr10 30156274 30158203 -115431085 - Tigger1 DNA MER2_type -325 2093 70 2166 122 0 0 chr10 30158663 30158951 -115430337 + AluSx SINE Alu 1 288 -24 28 0 0 0 chr10 30158957 30158985 -115430303 + AT_rich Low_complexity Low_complexity 1 28 0 1503 170 28 60 chr10 30159263 30159580 -115429708 - AluJo SINE Alu -5 307 1 213 39 0 0 chr10 30159656 30159682 -115429606 + (TCC)n Simple_repeat Simple_repeat 3 28 0 2307 90 7 13 chr10 30159685 30159850 -115429438 - AluSc SINE Alu -11 298 134 2892 16 0 0 chr10 30159850 30160163 -115429125 - AluYb8 SINE Alu -5 313 1 2307 90 7 13 chr10 30160163 30160297 -115428991 - AluSc SINE Alu -175 134 1 2315 64 7 7 chr10 30160307 30160605 -115428683 - AluYa5 SINE Alu -13 298 1 900 75 14 96 chr10 30160605 30160751 -115428537 - AluSg SINE Alu -176 134 1 789 191 0 6 chr10 30160754 30160916 -115428372 - L1ME LINE L1 -730 5436 5276 2115 123 0 0 chr10 30162100 30162443 -115426845 + AluSx SINE Alu 1 343 0 675 94 0 0 chr10 30162492 30162588 -115426700 + (TTTCC)n Simple_repeat Simple_repeat 3 98 0 1389 173 0 16 chr10 30162588 30162831 -115426457 - AluJo SINE Alu -30 282 44 2302 109 3 0 chr10 30163297 30163608 -115425680 - AluSx SINE Alu 0 312 1 2617 53 0 0 chr10 30164051 30164355 -115424933 + AluY SINE Alu 1 304 -7 1883 154 13 3 chr10 30164468 30164773 -115424515 + AluJb SINE Alu 2 309 -3 2503 32 6 41 chr10 30165075 30165389 -115423899 + AluY SINE Alu 1 303 -8 1675 168 69 7 chr10 30165501 30165792 -115423496 - AluJo SINE Alu -3 309 1 349 329 7 0 chr10 30165845 30165982 -115423306 - LTR67 LTR ERVL -2 555 418 195 104 62 0 chr10 30166369 30166417 -115422871 + (TA)n Simple_repeat Simple_repeat 1 51 0 1901 163 0 10 chr10 30166736 30167036 -115422252 + AluSx SINE Alu 1 297 -15 656 300 44 21 chr10 30167352 30167692 -115421596 - L2 LINE L2 -104 3209 2862 2487 114 5 14 chr10 30167754 30168121 -115421167 + THE1B LTR MaLR 1 364 0 1962 142 3 19 chr10 30168342 30168659 -115420629 + AluJo SINE Alu 1 312 0 791 182 0 0 chr10 30168868 30169000 -115420288 - FLAM_A SINE Alu -1 132 1 192 200 0 44 chr10 30169016 30169061 -115420227 + MIR SINE MIR 117 159 -103 375 283 20 0 chr10 30169161 30169260 -115420028 + L2 LINE L2 3213 3313 0 335 336 55 23 chr10 30169314 30169534 -115419754 + L2 LINE L2 2608 2834 -480 2042 140 0 10 chr10 30169743 30170051 -115419237 - AluSx SINE Alu -3 309 5 990 260 48 51 chr10 30170343 30170716 -115418572 + MER110 LTR ERV1 105 476 -15 2444 78 0 31 chr10 30171093 30171414 -115417874 + AluY SINE Alu 1 311 0 6257 156 17 56 chr10 30221432 30222415 -115366873 - L1 LINE L1 -881 5265 4344 2446 81 0 7 chr10 30222415 30222723 -115366565 + AluY SINE Alu 2 307 -4 6257 156 17 56 chr10 30222723 30223037 -115366251 - L1 LINE L1 -1802 4344 4019 668 228 28 11 chr10 30223043 30223223 -115366065 - L1 LINE L1 -3734 2412 2230 2450 77 0 0 chr10 30223237 30223548 -115365740 + AluY SINE Alu 1 311 0 541 133 0 0 chr10 30223707 30223782 -115365506 - AluS SINE Alu -237 76 2 1349 191 53 38 chr10 30224815 30224843 -115364445 - L1M4 LINE L1 -3149 2997 2971 1610 182 0 45 chr10 30224843 30224999 -115364289 - AluJo SINE Alu -13 299 162 2293 65 0 68 chr10 30224999 30225322 -115363966 - AluY SINE Alu -10 301 1 1610 182 0 45 chr10 30225322 30225478 -115363810 - AluJo SINE Alu -150 162 1 1349 191 53 38 chr10 30225478 30225560 -115363728 - L1M4 LINE L1 -3175 2971 2892 218 56 28 0 chr10 30225560 30225596 -115363692 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 2254 102 10 0 chr10 30225598 30225893 -115363395 - AluSp SINE Alu -15 298 1 1349 191 53 38 chr10 30225893 30226119 -115363169 - L1M4 LINE L1 -3254 2892 2652 566 156 128 18 chr10 30226159 30226268 -115363020 - FLAM_C SINE Alu -16 127 7 382 236 146 14 chr10 30226283 30226427 -115362861 - L1M4 LINE L1 -3536 2610 2448 6339 116 11 23 chr10 30226496 30227496 -115361792 - L1MA5A LINE L1 0 6297 5310 2178 110 7 0 chr10 30227496 30227788 -115361500 - AluSx SINE Alu -18 294 1 1687 116 56 8 chr10 30228336 30228615 -115360673 + AluSx SINE Alu 21 311 0 816 164 0 8 chr10 30228652 30228780 -115360508 - FLAM_C SINE Alu -16 127 1 605 214 24 0 chr10 30228912 30229038 -115360250 + MER5A DNA MER1_type 61 189 0 2125 181 65 117 chr10 30229483 30229565 -115359723 - LTR8A LTR ERV1 -3 724 639 2054 124 0 0 chr10 30229565 30229838 -115359450 + AluSx SINE Alu 1 273 -39 2125 181 65 117 chr10 30229838 30230518 -115358770 - LTR8A LTR ERV1 -88 639 1 244 237 85 0 chr10 30231089 30231148 -115358140 + MIR SINE MIR 84 147 -61 2246 102 3 3 chr10 30231160 30231454 -115357834 - AluSx SINE Alu -18 294 1 1877 178 0 0 chr10 30231479 30231777 -115357511 - AluJb SINE Alu -14 298 1 1523 79 0 88 chr10 30232106 30232357 -115356931 + AluSq SINE Alu 78 308 0 23 0 0 0 chr10 30233086 30233109 -115356179 + AT_rich Low_complexity Low_complexity 1 23 0 1599 188 14 0 chr10 30233109 30233391 -115355897 - AluJo SINE Alu -26 286 1 2161 114 0 23 chr10 30233463 30233769 -115355519 + AluSg SINE Alu 1 299 -11 2476 72 0 0 chr10 30234110 30234402 -115354886 - AluSq SINE Alu -21 292 1 2393 87 7 0 chr10 30234641 30234941 -115354347 + AluSq SINE Alu 1 302 -11 265 342 40 7 chr10 30235433 30235585 -115353703 - L3 LINE CR1 -159 1418 1262 336 269 50 25 chr10 30235953 30236072 -115353216 - MIR3 SINE MIR -22 186 65 321 121 52 0 chr10 30236205 30236263 -115353025 + L1ME4a LINE L1 6060 6120 -1 1909 142 14 3 chr10 30236280 30236576 -115352712 + AluSx SINE Alu 11 309 -3 738 167 0 15 chr10 30236586 30236718 -115352570 + FLAM_C SINE Alu 1 130 -3 864 75 0 0 chr10 30236718 30236825 -115352463 + U6 snRNA snRNA 1 107 0 24 0 0 0 chr10 30237628 30237652 -115351636 + GC_rich Low_complexity Low_complexity 1 24 0 1860 155 18 0 chr10 30239237 30239549 -115349739 + AluSx SINE Alu 3 319 0 806 163 0 0 chr10 30239552 30239675 -115349613 + AluJo SINE Alu 84 206 -106 2402 85 0 0 chr10 30239885 30240179 -115349109 + AluSp SINE Alu 1 294 -19 181 340 183 13 chr10 30240335 30240488 -115348800 + L2 LINE L2 2578 2756 -558 226 189 176 14 chr10 30240703 30240777 -115348511 + MER5A DNA MER1_type 24 109 -80 1603 160 0 107 chr10 30240819 30240988 -115348300 - AluSx SINE Alu 0 302 185 2032 123 0 33 chr10 30240988 30241288 -115348000 - AluSx SINE Alu -22 290 1 1603 160 0 107 chr10 30241288 30241456 -115347832 - AluSx SINE Alu -117 185 1 1905 172 7 0 chr10 30241811 30242141 -115347147 + AluSx SINE Alu 1 312 0 25 0 0 0 chr10 30242297 30242322 -115346966 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr10 30242383 30242406 -115346882 + AT_rich Low_complexity Low_complexity 1 23 0 2041 120 10 36 chr10 30242429 30242737 -115346551 - AluSx SINE Alu -12 300 1 227 284 25 0 chr10 30243005 30243086 -115346202 + L1ME LINE L1 5533 5615 -506 1700 173 4 0 chr10 30243112 30243384 -115345904 + AluJo SINE Alu 28 300 -12 2071 114 0 7 chr10 30243588 30243877 -115345411 + AluSx SINE Alu 3 289 -23 337 294 40 8 chr10 30244138 30244264 -115345024 - MIR SINE MIR -72 190 61 2164 115 0 7 chr10 30245416 30245712 -115343576 + AluSx SINE Alu 1 294 -18 1920 147 29 3 chr10 30245718 30246030 -115343258 + MER7A DNA MER2_type 1 318 -28 438 169 14 0 chr10 30246131 30246202 -115343086 + MER7A DNA MER2_type 262 333 -3 1053 236 91 15 chr10 30246529 30246927 -115342361 - L1M4 LINE L1 -1432 4714 4287 233 239 0 15 chr10 30246924 30246991 -115342297 - L1MC/D LINE L1 -707 5535 5470 * 328 144 83 23 chr10 30247183 30247229 -115342059 + (TATAG)n Simple_repeat Simple_repeat 1 43 -97 410 76 197 0 chr10 30247229 30247295 -115341993 + MADE1 DNA Mariner 2 80 0 328 144 83 23 chr10 30247295 30247380 -115341908 + (TATAG)n Simple_repeat Simple_repeat 43 140 0 5327 163 29 67 chr10 30247381 30247887 -115341401 - L1MB1 LINE L1 -65 7522 6998 2477 82 0 0 chr10 30247887 30248193 -115341095 - AluY SINE Alu -5 306 1 5327 163 29 67 chr10 30248193 30248373 -115340915 - L1MB1 LINE L1 -589 6998 6813 264 30 0 0 chr10 30248373 30248406 -115340882 + (TG)n Simple_repeat Simple_repeat 2 34 0 5327 163 29 67 chr10 30248406 30249521 -115339767 - L1MB1 LINE L1 -774 6813 5810 2185 91 18 0 chr10 30249521 30249862 -115339426 - AluSg SINE Alu 0 346 1 5327 163 29 67 chr10 30249862 30250033 -115339255 - L1MB1 LINE L1 -1777 5810 5634 1918 269 45 49 chr10 30250037 30251031 -115338257 - L1MB1 LINE L1 -2972 4593 3596 2262 109 0 3 chr10 30251031 30251334 -115337954 + AluSx SINE Alu 1 302 -10 1918 269 45 49 chr10 30251334 30251655 -115337633 - L1MB1 LINE L1 -3969 3596 3275 2114 129 7 0 chr10 30251655 30251974 -115337314 + AluSx SINE Alu 1 321 0 1918 269 45 49 chr10 30251974 30252761 -115336527 - L1MB1 LINE L1 -4290 3275 2542 1839 207 70 27 chr10 30252762 30253202 -115336086 - LTR2B LTR ERV1 0 490 32 1455 227 91 71 chr10 30253206 30253306 -115335982 - L1M3d LINE L1 -4596 1295 1198 1905 144 18 4 chr10 30253306 30253632 -115335656 - AluSx SINE Alu 0 330 1 1455 227 91 71 chr10 30253632 30253740 -115335548 - L1M3d LINE L1 -4693 1198 1094 2018 151 0 10 chr10 30253740 30254039 -115335249 - AluJo SINE Alu -16 296 1 1455 227 91 71 chr10 30254039 30254436 -115334852 - L1M3d LINE L1 -4797 1094 676 1153 284 76 62 chr10 30254591 30255119 -115334169 - L1M3d LINE L1 -5235 656 351 2659 43 0 0 chr10 30255119 30255423 -115333865 - AluY SINE Alu -7 304 1 1153 284 76 62 chr10 30255423 30255772 -115333516 - L1M3d LINE L1 -5540 351 9 189 0 0 0 chr10 30255780 30255801 -115333487 + (TC)n Simple_repeat Simple_repeat 2 22 0 * 333 0 0 0 chr10 30255800 30255837 -115333451 + (TG)n Simple_repeat Simple_repeat 2 38 0 1822 157 34 7 chr10 30255839 30256132 -115333156 - AluSx SINE Alu -11 301 1 1543 169 13 91 chr10 30256135 30256425 -115332863 - L1MC/D LINE L1 -743 5403 5203 2155 145 24 0 chr10 30256425 30256763 -115332525 - MER7A DNA MER2_type 0 346 3 1543 169 13 91 chr10 30256763 30257066 -115332222 - L1MC/D LINE L1 -943 5203 4878 280 267 0 0 chr10 30257212 30257298 -115331990 - MIR SINE MIR -2 260 175 2272 89 20 0 chr10 30257443 30257736 -115331552 + AluSp SINE Alu 1 299 -14 580 216 86 86 chr10 30257758 30258096 -115331192 - L1MC5 LINE L1 -60 7901 7564 2321 164 8 10 chr10 30258192 30258594 -115330694 + L1MB2 LINE L1 5764 6164 -7 450 175 217 0 chr10 30258601 30258721 -115330567 - L2 LINE L2 -609 2705 2560 649 313 32 4 chr10 30258831 30259077 -115330211 + ERVL LTR ERVL 4441 4693 -1071 1497 116 19 107 chr10 30259289 30259425 -115329863 - L1M2 LINE L1 -559 5741 5595 2482 60 0 3 chr10 30259425 30259725 -115329563 - AluY SINE Alu -12 299 1 2330 102 3 0 chr10 30259725 30260030 -115329258 - AluSg SINE Alu -4 306 1 1497 116 19 107 chr10 30260030 30260137 -115329151 - L1M2 LINE L1 -704 5596 5481 2334 97 0 10 chr10 30260137 30260436 -115328852 + AluSx SINE Alu 2 297 -15 1497 116 19 107 chr10 30260436 30260467 -115328821 - L1M2 LINE L1 -819 5481 5491 1967 178 0 0 chr10 30260467 30260770 -115328518 - AluJo SINE Alu -9 303 1 1497 116 19 107 chr10 30260770 30260802 -115328486 - L1M2 LINE L1 -808 5492 5459 342 221 47 35 chr10 30260831 30260917 -115328371 + AluY SINE Alu 1 87 -221 1748 150 7 18 chr10 30261041 30261327 -115327961 + AluSx SINE Alu 21 303 -9 270 81 0 0 chr10 30261339 30261376 -115327912 + (CA)n Simple_repeat Simple_repeat 2 38 0 2503 162 13 49 chr10 30261376 30261536 -115327752 + L1MA6 LINE L1 5792 5956 -344 2158 74 0 45 chr10 30261536 30261846 -115327442 + AluY SINE Alu 1 296 -15 2503 162 13 49 chr10 30261846 30261992 -115327296 + L1MA6 LINE L1 5956 6106 -194 2399 124 14 8 chr10 30261992 30262354 -115326934 - THE1B LTR MaLR 0 364 1 2503 162 13 49 chr10 30262354 30262563 -115326725 + L1MA6 LINE L1 6106 6291 -9 865 118 22 7 chr10 30263270 30263405 -115325883 + FLAM_C SINE Alu 7 143 0 29 28 0 0 chr10 30263522 30263558 -115325730 + AT_rich Low_complexity Low_complexity 1 36 0 1932 153 0 16 chr10 30264644 30264957 -115324331 - AluJb SINE Alu -2 310 3 1992 103 70 4 chr10 30264986 30265258 -115324030 + AluSg SINE Alu 1 290 -20 502 191 197 0 chr10 30265502 30265649 -115323639 + MIR SINE MIR 86 261 -1 484 254 7 36 chr10 30266480 30266618 -115322670 + MER94 DNA DNA 1 134 0 2230 91 0 17 chr10 30267376 30267672 -115321616 + AluSx SINE Alu 13 303 -9 1041 102 32 13 chr10 30267724 30267881 -115321407 + AluSp SINE Alu 1 160 -153 1441 88 6 0 chr10 30268006 30268188 -115321100 + AluSp SINE Alu 113 295 -18 437 301 56 50 chr10 30268197 30268601 -115320687 + L1ME4a LINE L1 5562 5964 -157 1516 97 21 13 chr10 30268792 30269030 -115320258 - LTR7 LTR ERV1 0 450 211 2364 86 0 7 chr10 30269037 30269339 -115319949 - AluY SINE Alu -11 300 1 2506 21 45 3 chr10 30269991 30270281 -115319007 + AluY SINE Alu 1 302 -9 288 158 0 0 chr10 30270354 30270411 -115318877 + T-rich Low_complexity Low_complexity 1 57 0 848 140 0 0 chr10 30270412 30270526 -115318762 - AluSq/x SINE Alu -199 114 1 1693 129 0 24 chr10 30270528 30270783 -115318505 - AluSx SINE Alu -16 296 48 2911 160 39 30 chr10 30270783 30271326 -115317962 + MLT2B3 LTR ERVL 1 548 -6 2094 140 0 7 chr10 30271835 30272135 -115317153 - AluSx SINE Alu -14 298 1 1590 139 64 6 chr10 30272176 30272490 -115316798 + L1PA16 LINE L1 5801 6163 0 1073 154 36 64 chr10 30272490 30272710 -115316578 + AluJo SINE Alu 82 295 -17 2359 101 0 0 chr10 30272712 30273019 -115316269 + AluY SINE Alu 1 307 -4 1747 199 3 3 chr10 30273102 30273404 -115315884 + AluJb SINE Alu 3 304 -8 738 129 11 140 chr10 30273494 30273672 -115315616 + MER20 DNA MER1_type 1 155 -64 609 144 0 0 chr10 30273674 30273771 -115315517 + FRAM SINE Alu 69 165 -11 1872 135 50 4 chr10 30274297 30274578 -115314710 - AluSx SINE Alu -18 294 1 1612 182 18 0 chr10 30275307 30275624 -115313664 - AluJo SINE Alu 0 312 13 500 294 31 0 chr10 30275631 30275794 -115313494 - L1ME LINE L1 -303 5818 5651 266 325 11 0 chr10 30276328 30276420 -115312868 + MER5A DNA MER1_type 25 127 -62 892 192 12 12 chr10 30276477 30276649 -115312639 - AluJo SINE Alu -16 296 125 1984 153 3 3 chr10 30276700 30276995 -115312293 - AluSx SINE Alu -17 295 1 260 248 124 66 chr10 30277323 30277444 -115311844 + MLT1I LTR MaLR 279 406 -3 1989 142 34 0 chr10 30277624 30277919 -115311369 + AluSx SINE Alu 1 305 -7 1997 140 3 3 chr10 30278440 30278733 -115310555 + AluSx SINE Alu 1 293 -19 315 0 0 0 chr10 30278738 30278773 -115310515 + (TG)n Simple_repeat Simple_repeat 2 36 0 911 219 45 0 chr10 30278814 30278992 -115310296 - AluJo SINE Alu -92 220 35 243 61 0 0 chr10 30278995 30279028 -115310260 + (TTG)n Simple_repeat Simple_repeat 1 33 0 428 264 25 0 chr10 30279245 30279366 -115309922 - MER113 DNA MER1_type? -64 457 334 2375 111 40 3 chr10 30279455 30279806 -115309482 - THE1B LTR MaLR 0 364 1 2297 113 8 23 chr10 30279806 30280160 -115309128 - Tigger2 DNA MER2_type -29 2689 2341 629 208 8 0 chr10 30280261 30280522 -115308766 + FRAM SINE Alu 56 417 -142 686 71 0 10 chr10 30280522 30280620 -115308668 + (GGAA)n Simple_repeat Simple_repeat 4 100 0 2334 91 3 7 chr10 30280920 30281218 -115308070 - AluSp SINE Alu -12 301 5 1318 158 8 73 chr10 30281222 30281503 -115307785 - AluJb SINE Alu 0 303 40 2325 95 0 0 chr10 30282034 30282328 -115306960 - AluSx SINE Alu -14 298 5 244 269 39 13 chr10 30282654 30282732 -115306556 + MIR3 SINE MIR 78 157 -51 5209 68 43 1 chr10 30282816 30283509 -115305779 - LTR30 LTR ERV1 0 722 1 2390 83 0 10 chr10 30283573 30283875 -115305413 + AluSc SINE Alu 1 299 -10 1219 98 0 11 chr10 30284121 30284295 -115304993 - AluY SINE Alu -12 299 128 1510 213 174 8 chr10 30284414 30284892 -115304396 - L1M4c LINE L1 -2900 3482 2926 1071 192 19 161 chr10 30284916 30285016 -115304272 + MLT1A1 LTR MaLR 1 114 -251 2362 64 0 38 chr10 30285016 30285329 -115303959 - AluY SINE Alu -10 301 1 1071 192 19 161 chr10 30285329 30285650 -115303638 + MLT1A1 LTR MaLR 114 362 -3 2402 72 13 3 chr10 30285655 30285959 -115303329 + AluSp SINE Alu 1 307 -6 1949 212 105 49 chr10 30285968 30286866 -115302422 - L1M4c LINE L1 -4002 2561 1405 2289 101 3 3 chr10 30287290 30287587 -115301701 - AluSp SINE Alu -16 297 1 1695 157 17 20 chr10 30288288 30288587 -115300701 + AluSx SINE Alu 1 298 -14 2441 254 108 25 chr10 30288962 30289133 -115300155 - L2 LINE L2 -287 3026 2871 2281 98 7 3 chr10 30289133 30289440 -115299848 + AluSc SINE Alu 1 308 -1 2441 254 108 25 chr10 30289440 30290367 -115298921 - L2 LINE L2 -442 2871 1826 1912 152 7 3 chr10 30290421 30290711 -115298577 - AluSx SINE Alu -21 291 1 985 170 0 6 chr10 30290718 30290877 -115298411 - FRAM SINE Alu -25 151 1 1766 137 10 17 chr10 30291746 30292039 -115297249 + AluJo SINE Alu 1 291 -21 237 108 0 0 chr10 30293001 30293108 -115296180 + (CGG)n Simple_repeat Simple_repeat 1 107 0 1162 100 18 118 chr10 30293301 30293413 -115295875 + LOR1a LTR ERV1 300 382 -115 2336 78 0 0 chr10 30293413 30293724 -115295564 + AluY SINE Alu 1 311 0 1162 100 18 118 chr10 30293724 30293830 -115295458 + LOR1a LTR ERV1 382 497 0 663 186 7 57 chr10 30294322 30294462 -115294826 + FLAM_A SINE Alu 1 133 0 2227 98 0 0 chr10 30294468 30294745 -115294543 + AluSg1 SINE Alu 1 277 -32 1236 51 17 11 chr10 30294746 30294923 -115294365 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 978 244 96 94 chr10 30295281 30295632 -115293656 + LTR16A LTR ERVL 18 372 -78 5280 83 4 24 chr10 30295632 30295797 -115293491 - L1MA2 LINE L1 -7 6297 6130 2443 51 0 41 chr10 30295797 30296112 -115293176 - AluY SINE Alu -9 302 1 5280 83 4 24 chr10 30296112 30296697 -115292591 - L1MA2 LINE L1 -174 6130 5562 978 244 96 94 chr10 30296697 30296771 -115292517 + LTR16A LTR ERVL 372 444 -6 224 205 0 0 chr10 30297384 30297423 -115291865 + polypurine Low_complexity Low_complexity 3 41 0 2312 122 0 0 chr10 30297453 30297765 -115291523 + AluSx SINE Alu 1 312 0 2285 74 7 17 chr10 30297831 30298129 -115291159 + AluY SINE Alu 1 295 -16 21 0 0 0 chr10 30298268 30298289 -115290999 + AT_rich Low_complexity Low_complexity 1 21 0 1886 150 0 10 chr10 30298819 30299113 -115290175 + AluJo SINE Alu 1 291 -21 2085 129 13 10 chr10 30299464 30299775 -115289513 + AluSx SINE Alu 1 312 0 375 226 0 12 chr10 30299920 30300004 -115289284 + MLT1F1 LTR MaLR 1 83 -484 1892 163 0 10 chr10 30300017 30300323 -115288965 + AluJb SINE Alu 3 305 -7 185 282 181 79 chr10 30300339 30300616 -115288672 + L2 LINE L2 2942 3246 -26 270 0 0 0 chr10 30300929 30300959 -115288329 + (TTTTTG)n Simple_repeat Simple_repeat 2 31 0 557 199 24 12 chr10 30301226 30301392 -115287896 + GA-rich Low_complexity Low_complexity 2 169 0 948 261 79 3 chr10 30301392 30301683 -115287605 - LTR16B LTR ERVL -151 313 1 209 0 97 0 chr10 30302005 30302036 -115287252 + A-rich Low_complexity Low_complexity 2 35 0 772 164 0 0 chr10 30302368 30302496 -115286792 - FLAM_C SINE Alu -4 139 12 245 283 0 0 chr10 30303253 30303306 -115285982 + AluS SINE Alu 5 57 -246 3703 184 68 15 chr10 30303453 30304703 -115284585 + L1MB5 LINE L1 4851 6166 -8 1595 169 108 19 chr10 30304739 30304799 -115284489 - MSTD LTR MaLR -2 394 341 2212 91 3 14 chr10 30304799 30305095 -115284193 + AluSg SINE Alu 1 293 -17 1595 169 108 19 chr10 30305095 30305396 -115283892 - MSTD LTR MaLR -55 341 1 360 331 33 65 chr10 30305397 30305672 -115283616 + L2 LINE L2 2158 2423 -891 508 257 151 18 chr10 30305672 30305890 -115283398 - MIR SINE MIR -12 250 4 403 342 89 0 chr10 30305890 30306091 -115283197 + L2 LINE L2 2423 2641 -673 28 0 0 0 chr10 30306110 30306138 -115283150 + AT_rich Low_complexity Low_complexity 1 28 0 1911 232 164 12 chr10 30306317 30306907 -115282381 + L2 LINE L2 615 1294 -2020 1640 209 8 16 chr10 30306909 30307272 -115282016 - MLT1A1 LTR MaLR -5 360 1 1248 242 60 56 chr10 30307314 30307540 -115281748 + L2 LINE L2 1332 1555 -1759 698 221 118 31 chr10 30307540 30307617 -115281671 + MER58C DNA MER1_type 4 73 -2347 2323 100 7 3 chr10 30307617 30307926 -115281362 - AluSg SINE Alu 0 310 1 698 221 118 31 chr10 30307926 30308043 -115281245 + MER58C DNA MER1_type 73 215 0 1248 242 60 56 chr10 30308043 30308263 -115281025 + L2 LINE L2 1555 1780 -1534 27 0 0 0 chr10 30308265 30308292 -115280996 + AT_rich Low_complexity Low_complexity 1 27 0 399 315 73 12 chr10 30308300 30308465 -115280823 + L2 LINE L2 3138 3312 -1 410 203 0 0 chr10 30308780 30308849 -115280439 + MER5A DNA MER1_type 5 73 -116 826 267 70 18 chr10 30309697 30309899 -115279389 + MLT1J LTR MaLR 22 243 -268 2606 45 0 0 chr10 30309899 30310208 -115279080 - AluY SINE Alu -2 309 1 826 267 70 18 chr10 30310208 30310278 -115279010 + MLT1J LTR MaLR 243 308 -203 2519 44 0 13 chr10 30310527 30310825 -115278463 + AluY SINE Alu 1 294 -17 403 30 0 30 chr10 30310868 30310935 -115278353 + L1PA15 LINE L1 6101 6165 0 21 57 0 19 chr10 30311004 30311025 -115278263 + AT_rich Low_complexity Low_complexity 1 21 -31 2385 67 0 3 chr10 30311025 30311324 -115277964 + AluY SINE Alu 1 298 -13 21 57 0 19 chr10 30311324 30311355 -115277933 + AT_rich Low_complexity Low_complexity 21 52 0 2202 99 10 0 chr10 30311980 30312272 -115277016 - AluSc SINE Alu -14 295 1 356 313 112 33 chr10 30312392 30312606 -115276682 + MIR SINE MIR 2 232 -30 212 222 14 83 chr10 30312941 30313013 -115276275 + MER5B DNA MER1_type 109 175 -3 281 314 73 36 chr10 30313034 30313171 -115276117 + L2 LINE L2 1102 1243 -2071 * 1081 263 116 23 chr10 30313161 30313650 -115275638 - L2 LINE L2 -148 3165 2616 406 249 11 115 chr10 30314018 30314237 -115275051 + MER20B DNA MER1_type 1 202 -17 470 332 56 12 chr10 30314258 30314508 -115274780 + L2 LINE L2 1887 2147 -1167 638 254 12 0 chr10 30314508 30314673 -115274615 + L1M4 LINE L1 1 167 -6375 268 171 46 9 chr10 30314673 30314827 -115274461 + AluSq SINE Alu 1 197 -106 1962 139 10 3 chr10 30314853 30315147 -115274141 + AluSx SINE Alu 2 297 -15 1959 113 13 23 chr10 30316946 30317246 -115272042 + AluSx SINE Alu 1 297 -15 185 154 128 26 chr10 30318598 30318637 -115270651 - L2 LINE L2 -2 3270 3228 2212 112 7 0 chr10 30319288 30319591 -115269697 + AluSx SINE Alu 1 305 -7 1006 197 143 65 chr10 30319595 30319874 -115269414 + AluJo SINE Alu 2 302 0 1927 151 34 3 chr10 30320548 30320846 -115268442 - AluSx SINE Alu -5 307 1 612 100 27 55 chr10 30322404 30322514 -115266774 - AluSg/x SINE Alu 0 312 206 181 296 34 34 chr10 30322598 30322686 -115266602 - MIR SINE MIR -46 216 129 774 324 172 16 chr10 30322743 30323265 -115266023 + L2 LINE L2 2508 3110 -203 241 275 78 56 chr10 30323863 30324005 -115265283 + L2 LINE L2 3150 3294 -19 302 233 27 14 chr10 30324103 30324176 -115265112 - MER5A DNA MER1_type -75 114 41 1012 184 93 48 chr10 30324208 30324518 -115264770 - MER33 DNA MER1_type 0 324 1 1720 149 29 7 chr10 30324890 30325165 -115264123 - AluSx SINE Alu -27 285 5 218 281 247 27 chr10 30325363 30325509 -115263779 + MIR SINE MIR 49 226 -36 2049 93 86 4 chr10 30325768 30326047 -115263241 + AluSx SINE Alu 1 302 -10 276 305 39 39 chr10 30326067 30326195 -115263093 + MER5B DNA MER1_type 2 129 -49 2014 108 42 0 chr10 30326196 30326484 -115262804 + AluSp SINE Alu 1 300 -13 2271 98 0 0 chr10 30328239 30328536 -115260752 + AluSq SINE Alu 1 297 -16 23 33 0 0 chr10 30328859 30328889 -115260399 + AT_rich Low_complexity Low_complexity 1 30 0 2312 99 0 10 chr10 30328896 30329210 -115260078 - AluSq SINE Alu -2 311 1 548 214 56 0 chr10 30329738 30329864 -115259424 + MER3 DNA MER1_type 1 133 -76 1753 191 0 25 chr10 30329869 30330183 -115259105 - AluJb SINE Alu -4 308 3 1903 128 7 20 chr10 30330869 30331167 -115258121 + AluSg SINE Alu 1 294 -16 229 317 147 5 chr10 30332500 30332724 -115256564 + MARNA DNA Mariner 185 440 -146 315 0 0 0 chr10 30332771 30332806 -115256482 + (TG)n Simple_repeat Simple_repeat 2 36 0 2040 108 47 17 chr10 30332806 30333102 -115256186 - AluSx SINE Alu -7 305 1 207 0 0 0 chr10 30333832 30333855 -115255433 + (T)n Simple_repeat Simple_repeat 1 23 0 208 279 0 0 chr10 30333867 30333910 -115255378 + MIR3 SINE MIR 139 181 -27 1540 172 66 30 chr10 30334673 30334858 -115254430 - MER2 DNA MER2_type 0 344 140 1913 148 7 7 chr10 30334858 30335155 -115254133 - AluSx SINE Alu -15 297 1 1540 172 66 30 chr10 30335155 30335301 -115253987 - MER2 DNA MER2_type -204 140 1 236 324 141 25 chr10 30335599 30335949 -115253339 + L2 LINE L2 2647 3070 -202 347 273 27 18 chr10 30335999 30336109 -115253179 + L2 LINE L2 2344 2454 -860 347 244 248 54 chr10 30336114 30336372 -115252916 + L2 LINE L2 2624 2931 -383 1114 151 25 29 chr10 30336374 30336619 -115252669 - MER31A LTR ERV1 -2 483 240 526 190 39 84 chr10 30336619 30336944 -115252344 + MSTD LTR MaLR 1 389 -7 563 160 0 0 chr10 30336944 30337038 -115252250 - MER31A LTR ERV1 -240 245 152 2559 195 58 25 chr10 30337039 30338093 -115251195 - L1M2 LINE L1 -628 5684 4595 1616 191 10 14 chr10 30338400 30338694 -115250594 + AluJb SINE Alu 1 293 -19 2223 121 0 0 chr10 30338779 30339076 -115250212 + AluY SINE Alu 1 297 -14 967 187 87 4 chr10 30339242 30339483 -115249805 - MER93a LTR ERV1 -24 378 118 22 35 0 0 chr10 30339543 30339572 -115249716 + AT_rich Low_complexity Low_complexity 1 29 0 186 342 13 63 chr10 30340040 30340119 -115249169 - L2 LINE L2 -37 3235 3161 261 0 0 0 chr10 30340123 30340152 -115249136 + (TG)n Simple_repeat Simple_repeat 2 30 0 490 261 167 74 chr10 30340176 30340468 -115248820 - L2 LINE L2 -159 3154 2806 1086 211 121 44 chr10 30340468 30340880 -115248408 - LTR56 LTR ERV1 -1 444 1 490 261 167 74 chr10 30340880 30341020 -115248268 - L2 LINE L2 -507 2806 2680 1398 161 23 87 chr10 30341046 30341345 -115247943 + AluJb SINE Alu 1 280 -32 558 228 108 56 chr10 30341370 30341620 -115247668 - L2 LINE L2 -860 2454 2192 386 229 56 49 chr10 30341659 30341803 -115247485 - MER58B DNA MER1_type 0 341 197 622 244 87 87 chr10 30341848 30342159 -115247129 - L2 LINE L2 -1145 2169 1859 1533 148 11 23 chr10 30342635 30342899 -115246389 + MER1B DNA MER1_type 3 263 -76 2086 123 7 7 chr10 30343050 30343342 -115245946 - AluSx SINE Alu -20 292 1 973 115 0 0 chr10 30344061 30344191 -115245097 - AluSq/x SINE Alu -183 130 1 1981 106 3 70 chr10 30344556 30344885 -115244403 - AluSc SINE Alu -2 307 1 1477 157 96 4 chr10 30344981 30345266 -115244022 + AluJb SINE Alu 1 309 0 2319 200 98 35 chr10 30345656 30346341 -115242947 - L1MD2 LINE L1 -20 6339 5612 1146 120 0 18 chr10 30346357 30346524 -115242764 - FRAM SINE Alu -13 163 1 180 257 158 69 chr10 30347135 30347236 -115242052 + L2 LINE L2 3200 3309 -4 844 231 69 71 chr10 30347562 30348125 -115241163 - HAL1b LINE L1 -786 562 1 1677 159 61 14 chr10 30348729 30349024 -115240264 - AluJo SINE Alu -3 309 1 1913 142 0 16 chr10 30349361 30349534 -115239754 - AluSg SINE Alu -6 304 137 1424 58 16 0 chr10 30349534 30349723 -115239565 - L1PA5 LINE L1 -1 6153 5962 1913 142 0 16 chr10 30349723 30349858 -115239430 - AluSg SINE Alu -173 137 1 249 268 125 48 chr10 30351554 30351722 -115237566 - L2 LINE L2 -1 3312 3132 1927 99 99 3 chr10 30351933 30352216 -115237072 - AluSx SINE Alu -2 310 1 22 35 0 0 chr10 30352884 30352913 -115236375 + AT_rich Low_complexity Low_complexity 1 29 0 2266 101 0 0 chr10 30353045 30353341 -115235947 + AluSg SINE Alu 3 298 -12 314 186 105 35 chr10 30353348 30353434 -115235854 - L2 LINE L2 -208 3105 3014 2124 120 3 0 chr10 30353516 30353815 -115235473 + AluSq SINE Alu 1 300 -13 261 155 2 56 chr10 30354135 30354195 -115235093 - FLAM SINE Alu -12 121 72 885 204 40 22 chr10 30354230 30354455 -115234833 - L1MB8 LINE L1 -125 6053 5825 1914 202 65 61 chr10 30354691 30355137 -115234151 - L1MB8 LINE L1 -9 6169 5726 1820 125 50 7 chr10 30355137 30355434 -115233854 - AluSg SINE Alu 0 310 1 1964 139 0 3 chr10 30355442 30355730 -115233558 - AluSx SINE Alu -25 287 1 1914 202 65 61 chr10 30355730 30355829 -115233459 - L1MB8 LINE L1 -458 5720 5613 192 40 0 0 chr10 30355927 30355952 -115233336 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 1321 119 9 22 chr10 30356086 30356313 -115232975 - L1PA16 LINE L1 -7 6159 5936 1503 191 61 16 chr10 30356361 30356778 -115232510 - L1MB8 LINE L1 -570 5608 5172 1838 161 56 3 chr10 30356833 30357155 -115232133 + MER7A DNA MER2_type 10 346 0 236 242 32 16 chr10 30357448 30357510 -115231778 - MER20B DNA MER1_type -352 431 369 268 188 333 21 chr10 30357575 30357671 -115231617 - MER20B DNA MER1_type -435 348 223 936 205 151 0 chr10 30357774 30358033 -115231255 - MER33 DNA MER1_type -25 299 2 185 319 0 42 chr10 30358787 30358859 -115230429 + MER5A DNA MER1_type 4 72 -117 1595 179 21 14 chr10 30358863 30359162 -115230126 + AluSx SINE Alu 1 301 0 2268 203 49 79 chr10 30361821 30362240 -115227048 - MER68 LTR ERV1 -8 554 155 714 178 31 0 chr10 30362240 30362369 -115226919 - FLAM_A SINE Alu 0 133 1 2268 203 49 79 chr10 30362369 30362520 -115226768 - MER68 LTR ERV1 -407 155 1 1873 88 4 31 chr10 30362529 30362816 -115226472 - AluSx SINE Alu 0 312 33 186 291 128 23 chr10 30363263 30363349 -115225939 + L2 LINE L2 2229 2323 -991 192 409 54 21 chr10 30363422 30363608 -115225680 + L2 LINE L2 2552 2743 -571 194 273 91 0 chr10 30364860 30364915 -115224373 - L2 LINE L2 -17 3296 3237 237 381 126 14 chr10 30365030 30365563 -115223725 - L2 LINE L2 -5 3267 2668 1819 114 96 0 chr10 30365796 30366068 -115223220 + AluSx SINE Alu 1 298 -14 325 245 293 0 chr10 30366075 30366287 -115223001 - LTR50 LTR ERVL -43 752 479 409 202 73 18 chr10 30366359 30366468 -115222820 - LTR50 LTR ERVL -666 129 15 186 133 0 0 chr10 30366515 30366545 -115222743 + (T)n Simple_repeat Simple_repeat 1 30 0 1624 158 9 53 chr10 30367384 30367706 -115221582 + AluJo SINE Alu 5 312 0 666 183 0 0 chr10 30367967 30368082 -115221206 + FLAM_A SINE Alu 1 115 -18 1198 169 164 50 chr10 30368119 30368503 -115220785 - Charlie1b DNA MER1_type -94 429 2 230 327 35 26 chr10 30369460 30369573 -115219715 + MIR SINE MIR 34 147 -61 703 109 138 52 chr10 30369723 30369897 -115219391 - L1MA5A LINE L1 -2 6295 6107 1870 162 30 0 chr10 30371025 30371322 -115217966 + AluJb SINE Alu 1 306 -6 21 57 0 0 chr10 30371670 30371705 -115217583 + AT_rich Low_complexity Low_complexity 1 35 0 1491 153 99 11 chr10 30372565 30372847 -115216441 + AluJo SINE Alu 3 309 -3 2118 127 3 3 chr10 30373328 30373628 -115215660 + AluSc SINE Alu 1 300 -9 314 264 81 34 chr10 30373743 30373891 -115215397 - L1ME4a LINE L1 -123 5998 5844 248 286 48 24 chr10 30373919 30374003 -115215285 - L1ME4a LINE L1 -2015 5793 5708 1717 99 144 4 chr10 30374472 30374735 -115214553 + AluSx SINE Alu 1 300 -12 679 197 40 26 chr10 30374884 30375036 -115214252 - MER20B DNA MER1_type -1 218 65 23 54 0 0 chr10 30376357 30376394 -115212894 + AT_rich Low_complexity Low_complexity 1 37 0 605 200 0 0 chr10 30378949 30379054 -115210234 - FLAM_C SINE Alu -38 105 1 320 250 143 0 chr10 30380316 30380400 -115208888 + L2 LINE L2 3207 3302 -11 450 254 113 14 chr10 30381690 30381903 -115207385 + L1M4 LINE L1 5127 5360 -786 3678 198 72 18 chr10 30381910 30383055 -115206233 + L1MB4 LINE L1 4970 6179 -1 1252 123 128 0 chr10 30384127 30384330 -115204958 + MER30 DNA MER1_type 2 230 0 2331 72 0 7 chr10 30384637 30384929 -115204359 + AluY SINE Alu 1 290 -21 474 65 0 0 chr10 30384929 30384991 -115204297 + (TA)n Simple_repeat Simple_repeat 2 63 0 22 70 0 0 chr10 30385065 30385108 -115204180 + AT_rich Low_complexity Low_complexity 1 43 0 1783 146 46 4 chr10 30385436 30385717 -115203571 + AluSx SINE Alu 1 293 -19 201 333 0 0 chr10 30386217 30386265 -115203023 - L3 LINE CR1 -15 1562 1515 217 250 143 93 chr10 30386282 30386422 -115202866 + MER5B DNA MER1_type 29 175 -3 182 265 103 15 chr10 30386454 30386522 -115202766 - MIR SINE MIR -119 143 70 1512 166 63 11 chr10 30387034 30387318 -115201970 - AluJb SINE Alu -9 303 5 193 293 64 71 chr10 30387484 30387624 -115201664 - L3 LINE CR1 -985 592 454 909 271 80 23 chr10 30387676 30388164 -115201124 - L1ME LINE L1 -419 5743 5230 208 275 87 14 chr10 30388915 30388984 -115200304 + MIR SINE MIR 72 145 -117 1739 136 0 4 chr10 30390109 30390367 -115198921 + AluSx SINE Alu 44 300 -12 1297 170 70 4 chr10 30390593 30390822 -115198466 + AluJb SINE Alu 1 244 -68 2184 97 27 7 chr10 30390913 30391211 -115198077 - AluSq SINE Alu -9 304 1 521 151 170 0 chr10 30393987 30394093 -115195195 + FLAM_C SINE Alu 1 124 -9 1424 153 13 4 chr10 30394112 30394348 -115194940 + AluSx SINE Alu 41 278 -34 579 222 90 21 chr10 30394360 30394504 -115194784 + AluJb SINE Alu 140 293 -19 2371 28 43 0 chr10 30395097 30395379 -115193909 - AluY SINE Alu -17 294 1 1446 205 18 7 chr10 30396299 30396582 -115192706 - MARNA DNA Mariner -39 547 262 2012 138 0 16 chr10 30397782 30398086 -115191202 + AluSx SINE Alu 1 299 -13 2275 105 0 3 chr10 30399983 30400288 -115189000 + AluSx SINE Alu 1 304 -8 22 35 0 0 chr10 30400377 30400406 -115188882 + AT_rich Low_complexity Low_complexity 1 29 0 29 0 0 0 chr10 30400431 30400460 -115188828 + AT_rich Low_complexity Low_complexity 1 29 0 27 0 0 0 chr10 30400941 30400968 -115188320 + AT_rich Low_complexity Low_complexity 1 27 0 192 77 0 0 chr10 30402150 30402176 -115187112 + (TTC)n Simple_repeat Simple_repeat 2 27 0 180 0 0 0 chr10 30402202 30402222 -115187066 + (T)n Simple_repeat Simple_repeat 1 20 0 2300 78 3 0 chr10 30402867 30403163 -115186125 - AluSp SINE Alu -16 297 1 195 100 0 0 chr10 30403401 30403431 -115185857 + (C)n Simple_repeat Simple_repeat 1 30 0 491 298 231 18 chr10 30404248 30404755 -115184533 + L2 LINE L2 2184 2798 -516 528 167 115 0 chr10 30404899 30404995 -115184293 + FLAM_C SINE Alu 2 108 -35 255 312 43 11 chr10 30405912 30406005 -115183283 + L2 LINE L2 3208 3303 -10 1012 141 107 5 chr10 30406211 30406417 -115182871 + L1MA5A LINE L1 5382 5608 -689 970 167 0 0 chr10 30406418 30406580 -115182708 + AluSg/x SINE Alu 135 296 -14 2166 138 126 20 chr10 30406580 30407031 -115182257 + L1MA5A LINE L1 5600 6098 -199 1864 94 11 120 chr10 30407036 30407386 -115181902 - AluSx SINE Alu 0 312 1 644 282 40 20 chr10 30408459 30408707 -115180581 - L1MC4 LINE L1 0 8042 7790 2066 119 7 0 chr10 30408707 30409002 -115180286 + AluSx SINE Alu 1 297 -15 605 263 57 99 chr10 30410386 30410521 -115178767 + L2 LINE L2 2945 3084 -229 2223 110 0 0 chr10 30410521 30410829 -115178459 - AluSx SINE Alu -4 308 1 605 263 57 99 chr10 30410829 30411046 -115178242 + L2 LINE L2 3084 3282 -31 1295 180 94 8 chr10 30411046 30411313 -115177975 + AluJo SINE Alu 2 291 -21 605 263 57 99 chr10 30411313 30411343 -115177945 + L2 LINE L2 3282 3312 -1 1703 149 11 4 chr10 30411975 30412283 -115177005 - AluJo SINE Alu 0 310 1 1199 126 23 96 chr10 30412700 30412961 -115176327 + AluJo SINE Alu 71 312 0 293 286 49 94 chr10 30412986 30413101 -115176187 + MIR SINE MIR 47 149 -113 1521 193 20 13 chr10 30413101 30413401 -115175887 - AluJb SINE Alu -10 302 1 293 286 49 94 chr10 30413401 30413509 -115175779 + MIR SINE MIR 149 260 -2 246 128 0 0 chr10 30413972 30414011 -115175277 + (TG)n Simple_repeat Simple_repeat 2 40 0 2196 103 3 0 chr10 30414064 30414376 -115174912 + AluSp SINE Alu 1 313 0 2669 127 16 35 chr10 30414445 30414879 -115174409 - MSTB LTR MaLR 0 426 1 1798 138 32 0 chr10 30415526 30415808 -115173480 - AluSx SINE Alu -21 291 1 1441 243 63 69 chr10 30415808 30416175 -115173113 - L2 LINE L2 -3 3310 2942 1580 151 35 28 chr10 30416175 30416460 -115172828 + AluJo SINE Alu 6 292 -20 1441 243 63 69 chr10 30416460 30416991 -115172297 - L2 LINE L2 -371 2942 2400 2065 135 3 0 chr10 30417236 30417547 -115171741 + AluSx SINE Alu 1 312 0 282 243 29 107 chr10 30418000 30418104 -115171184 - MER94 DNA DNA -1 133 41 2246 99 3 0 chr10 30418104 30418406 -115170882 + AluSx SINE Alu 5 307 -5 282 243 29 107 chr10 30418406 30418441 -115170847 - MER94 DNA DNA -93 41 5 21 0 0 0 chr10 30418965 30418986 -115170302 + AT_rich Low_complexity Low_complexity 1 21 0 1706 148 24 3 chr10 30418986 30419277 -115170011 + AluJo SINE Alu 1 297 -15 210 171 0 0 chr10 30419355 30419390 -115169898 + (TA)n Simple_repeat Simple_repeat 2 36 0 459 253 55 108 chr10 30419433 30419968 -115169320 - L1MC4a LINE L1 -449 5672 5441 3948 161 20 56 chr10 30420169 30420219 -115169069 - L1MB1 LINE L1 -1 6167 6117 2180 99 3 3 chr10 30420219 30420522 -115168766 - AluSq SINE Alu -10 303 1 3948 161 20 56 chr10 30420522 30420831 -115168457 - L1MB1 LINE L1 -51 6117 5798 1886 147 7 0 chr10 30420831 30421130 -115168158 - AluSx SINE Alu -11 301 1 3948 161 20 56 chr10 30421130 30421575 -115167713 - L1MB1 LINE L1 -370 5798 5391 1320 181 50 32 chr10 30421575 30421852 -115167436 + MSTB1 LTR MaLR 1 282 -150 449 289 67 36 chr10 30421864 30422058 -115167230 + MIR SINE MIR 20 219 -43 2031 114 0 26 chr10 30422333 30422639 -115166649 - AluSx SINE Alu -10 302 5 2182 114 10 0 chr10 30423095 30423401 -115165887 + AluSq SINE Alu 1 309 -4 1484 165 71 8 chr10 30423716 30423983 -115165305 + AluJo SINE Alu 1 284 -28 1700 161 0 20 chr10 30424979 30425278 -115164010 + AluJb SINE Alu 1 293 -19 184 337 87 66 chr10 30425278 30425349 -115163939 + L3b LINE CR1 1257 1325 -258 2000 106 17 7 chr10 30425349 30425641 -115163647 - AluSx SINE Alu -16 296 2 184 337 87 66 chr10 30425641 30425765 -115163523 + L3b LINE CR1 1325 1456 -127 1331 195 52 37 chr10 30426674 30426702 -115162586 - L1M4 LINE L1 -3149 2997 2971 1494 182 0 45 chr10 30426702 30426858 -115162430 - AluJo SINE Alu -13 299 162 2160 65 0 68 chr10 30426858 30427181 -115162107 - AluY SINE Alu -10 301 1 1494 182 0 45 chr10 30427181 30427337 -115161951 - AluJo SINE Alu -150 162 1 1331 195 52 37 chr10 30427337 30427419 -115161869 - L1M4 LINE L1 -3175 2971 2892 218 56 28 0 chr10 30427419 30427455 -115161833 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 2127 102 10 0 chr10 30427457 30427752 -115161536 - AluSp SINE Alu -15 298 1 1331 195 52 37 chr10 30427752 30427985 -115161303 - L1M4 LINE L1 -3254 2892 2645 568 156 128 18 chr10 30428018 30428127 -115161161 - FLAM_C SINE Alu -16 127 7 367 236 146 14 chr10 30428142 30428286 -115161002 - L1M4 LINE L1 -3536 2610 2448 6662 134 13 36 chr10 30428355 30429356 -115159932 - L1MA5A LINE L1 0 6297 5367 1925 130 7 0 chr10 30429356 30429648 -115159640 - AluSx SINE Alu -18 294 1 6662 134 13 36 chr10 30429648 30430675 -115158613 - L1MA5A LINE L1 -930 5367 4318 2352 71 0 0 chr10 30430675 30430985 -115158303 + AluY SINE Alu 2 311 0 1903 116 3 27 chr10 30431005 30431298 -115157990 + AluSx SINE Alu 9 294 -18 2150 105 0 0 chr10 30431298 30431603 -115157685 + AluY SINE Alu 1 305 -6 308 239 15 0 chr10 30431606 30431673 -115157615 - MER106A DNA MER1_type -168 68 1 799 265 106 50 chr10 30431683 30432023 -115157265 + L2 LINE L2 2915 3279 -34 2229 102 0 10 chr10 30432023 30432328 -115156960 - AluSp SINE Alu -11 302 1 799 265 106 50 chr10 30432328 30432365 -115156923 + L2 LINE L2 3279 3313 0 2157 103 7 0 chr10 30432504 30432804 -115156484 + AluSq SINE Alu 1 302 -11 2162 88 7 3 chr10 30434217 30434512 -115154776 - AluSx SINE Alu -14 298 3 23 33 0 0 chr10 30434523 30434553 -115154735 + AT_rich Low_complexity Low_complexity 1 30 0 1552 175 3 34 chr10 30434553 30434850 -115154438 - AluJo SINE Alu -24 288 1 2102 93 0 10 chr10 30435122 30435411 -115153877 + AluSx SINE Alu 13 298 -14 1773 77 3 181 chr10 30435966 30436099 -115153189 + AluSx SINE Alu 1 156 -157 4520 42 4 14 chr10 30436099 30436652 -115152636 + SVA Other Other 835 1381 -5 1773 77 3 181 chr10 30436652 30436894 -115152394 + AluSx SINE Alu 156 313 0 228 35 0 0 chr10 30436998 30437027 -115152261 + (TG)n Simple_repeat Simple_repeat 2 30 0 896 159 0 0 chr10 30437334 30437466 -115151822 + AluJo/FLAM SINE Alu 2 133 -169 1968 110 4 0 chr10 30437466 30437747 -115151541 + AluSp SINE Alu 21 302 -11 2443 80 0 0 chr10 30438091 30438402 -115150886 + AluSq SINE Alu 1 311 -2 371 85 34 0 chr10 30438406 30438465 -115150823 + A-rich Low_complexity Low_complexity 4 64 0 2080 112 3 7 chr10 30438477 30438782 -115150506 + AluSx SINE Alu 3 306 -6 237 292 75 74 chr10 30438820 30439076 -115150212 + MIR3 SINE MIR 4 262 0 385 174 14 0 chr10 30439248 30439317 -115149971 + MER5A DNA MER1_type 1 70 -119 2110 128 3 0 chr10 30439364 30439669 -115149619 - AluSx SINE Alu -5 307 2 2342 81 0 0 chr10 30439671 30439969 -115149319 - AluSx SINE Alu -14 298 1 1566 119 56 8 chr10 30440517 30440796 -115148492 + AluSx SINE Alu 21 311 0 810 172 0 8 chr10 30440821 30440955 -115148333 - AluJo SINE Alu -174 138 6 659 214 24 0 chr10 30441093 30441219 -115148069 + MER5A DNA MER1_type 61 189 0 227 340 80 43 chr10 30441334 30441496 -115147792 - MIR3 SINE MIR -23 185 18 2127 181 65 117 chr10 30441664 30441746 -115147542 - LTR8A LTR ERV1 -3 724 639 1946 121 0 0 chr10 30441746 30442019 -115147269 + AluSx SINE Alu 1 273 -39 2127 181 65 117 chr10 30442019 30442699 -115146589 - LTR8A LTR ERV1 -88 639 1 268 237 85 0 chr10 30443270 30443329 -115145959 + MIR SINE MIR 84 147 -61 2118 102 3 3 chr10 30443341 30443635 -115145653 - AluSx SINE Alu -18 294 1 23 0 0 0 chr10 30443637 30443660 -115145628 + AT_rich Low_complexity Low_complexity 1 23 0 1773 174 0 0 chr10 30443660 30443958 -115145330 - AluJb SINE Alu -14 298 1 1396 88 0 88 chr10 30444287 30444538 -115144750 + AluSq SINE Alu 78 308 0 23 0 0 0 chr10 30445266 30445289 -115143999 + AT_rich Low_complexity Low_complexity 1 23 0 1491 188 14 0 chr10 30445289 30445571 -115143717 - AluJo SINE Alu -26 286 1 2051 111 0 23 chr10 30445643 30445949 -115143339 + AluSg SINE Alu 1 299 -11 2342 72 0 0 chr10 30446290 30446582 -115142706 - AluSq SINE Alu -21 292 1 2304 90 6 0 chr10 30446821 30447132 -115142156 + AluSq SINE Alu 1 313 0 336 338 46 7 chr10 30447620 30447771 -115141517 - L3 LINE CR1 -159 1418 1262 383 257 42 69 chr10 30448139 30448283 -115141005 - MIR3 SINE MIR -22 186 47 315 121 52 0 chr10 30448391 30448449 -115140839 + L1ME4a LINE L1 6060 6120 -1 1796 142 14 3 chr10 30448466 30448762 -115140526 + AluSx SINE Alu 11 309 -3 753 165 0 15 chr10 30448772 30448905 -115140383 + FLAM_C SINE Alu 1 131 -2 864 75 0 0 chr10 30448905 30449012 -115140276 + U6 snRNA snRNA 1 107 0 24 0 0 0 chr10 30449815 30449839 -115139449 + GC_rich Low_complexity Low_complexity 1 24 0 200 351 18 0 chr10 30451348 30451405 -115137883 - MIR SINE MIR -113 149 92 453 149 0 0 chr10 30451424 30451736 -115137552 + AluSx SINE Alu 3 314 0 1176 171 9 0 chr10 30451739 30451955 -115137333 + AluJb SINE Alu 84 301 -11 1687 149 0 0 chr10 30452020 30452282 -115137006 - AluSx SINE Alu -40 272 11 1994 125 24 0 chr10 30452819 30453108 -115136180 - AluSx SINE Alu -16 296 1 234 100 0 0 chr10 30453137 30453167 -115136121 + U2 snRNA snRNA 1 30 -158 817 182 14 0 chr10 30453185 30453333 -115135955 - FRAM SINE Alu -17 159 10 600 148 0 0 chr10 30453339 30453427 -115135861 - AluJ/FLAM SINE Alu -223 89 2 207 0 0 0 chr10 30454028 30454051 -115135237 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1165 199 96 4 chr10 30454458 30454719 -115134569 + AluJo SINE Alu 15 299 -13 950 119 6 25 chr10 30454827 30454986 -115134302 + AluJo SINE Alu 7 162 -150 2238 63 7 7 chr10 30456616 30456919 -115132369 + AluSg SINE Alu 3 305 -5 180 125 0 0 chr10 30458430 30458462 -115130826 + (CGGGG)n Simple_repeat Simple_repeat 3 34 0 24 32 0 0 chr10 30458850 30458881 -115130407 + GC_rich Low_complexity Low_complexity 1 31 0 251 341 0 0 chr10 30459516 30459683 -115129605 + (TG)n Simple_repeat Simple_repeat 2 168 0 2216 87 10 0 chr10 30464697 30464986 -115124302 + AluSg SINE Alu 1 292 -18 349 167 15 0 chr10 30465288 30465354 -115123934 - AluSg/x SINE Alu -26 274 208 1422 115 5 5 chr10 30465405 30465613 -115123675 - AluSq SINE Alu -105 208 1 280 259 36 98 chr10 30466983 30467095 -115122193 + MIR SINE MIR 79 183 -79 249 33 0 0 chr10 30468511 30468541 -115120747 + (TG)n Simple_repeat Simple_repeat 1 30 0 192 229 0 0 chr10 30469010 30469045 -115120243 + L2 LINE L2 3149 3183 -89 2144 102 3 0 chr10 30469804 30470099 -115119189 - AluSp SINE Alu -4 309 14 1286 155 68 8 chr10 30470176 30470427 -115118861 - AluJo SINE Alu -46 266 1 473 194 0 11 chr10 30470441 30470534 -115118754 - FLAM_C SINE Alu -18 125 34 27 62 0 0 chr10 30470656 30470704 -115118584 + AT_rich Low_complexity Low_complexity 1 48 0 1179 228 3 14 chr10 30470773 30471062 -115118226 - L1MA4 LINE L1 -11 6289 6004 1741 166 0 13 chr10 30471994 30472296 -115116992 - AluJb SINE Alu -14 298 1 1103 141 131 5 chr10 30472330 30472529 -115116759 + MSTA LTR MaLR 1 224 -204 240 163 0 0 chr10 30472533 30472576 -115116712 + C-rich Low_complexity Low_complexity 4 46 0 609 133 33 20 chr10 30472595 30472745 -115116543 + CT-rich Low_complexity Low_complexity 3 154 0 957 158 133 20 chr10 30472762 30472965 -115116323 + MSTA LTR MaLR 203 428 0 443 217 157 0 chr10 30472989 30473104 -115116184 + MIR SINE MIR 27 159 -103 958 142 6 24 chr10 30473109 30473278 -115116010 - FRAM SINE Alu 0 40 1 314 127 18 0 chr10 30473302 30473357 -115115931 + MIR SINE MIR 169 224 -38 2355 79 7 0 chr10 30473504 30473807 -115115481 + AluSx SINE Alu 1 305 -7 1716 161 0 3 chr10 30474268 30474554 -115114734 + AluJb SINE Alu 1 285 -27 2255 111 0 0 chr10 30474648 30474955 -115114333 + AluSx SINE Alu 1 307 -5 1830 149 13 20 chr10 30475049 30475351 -115113937 + AluJo SINE Alu 1 300 -12 2043 132 3 0 chr10 30475789 30476093 -115113195 - AluSx SINE Alu -3 309 5 1055 128 13 0 chr10 30476130 30476286 -115113002 - AluJb SINE Alu -25 287 130 21 36 0 0 chr10 30476532 30476560 -115112728 + AT_rich Low_complexity Low_complexity 1 28 0 1800 157 3 10 chr10 30477125 30477430 -115111858 + AluJo SINE Alu 9 311 -1 660 191 7 29 chr10 30477473 30477609 -115111679 - AluSq/x SINE Alu -178 134 2 2105 110 7 3 chr10 30477946 30478254 -115111034 - AluSp SINE Alu -4 309 1 2117 107 7 0 chr10 30478451 30478740 -115110548 - AluSx SINE Alu -18 294 4 1825 146 3 19 chr10 30479735 30480043 -115109245 - AluJo SINE Alu -9 303 1 926 127 0 0 chr10 30480104 30480238 -115109050 - AluSg/x SINE Alu -45 265 132 2080 121 7 0 chr10 30480238 30480535 -115108753 - AluSx SINE Alu -13 299 1 188 286 14 29 chr10 30480692 30480762 -115108526 + L3 LINE CR1 1404 1472 -105 1989 64 0 0 chr10 30480897 30481146 -115108142 - AluY SINE Alu -6 305 57 256 360 0 0 chr10 30481217 30481292 -115107996 + MER5C DNA MER1_type 9 83 -241 488 138 0 0 chr10 30481298 30481378 -115107910 - MADE1 DNA Mariner 0 80 1 1891 117 60 0 chr10 30481381 30481663 -115107625 - AluSx SINE Alu -13 299 1 386 82 0 0 chr10 30481663 30481712 -115107576 - MSTB LTR MaLR -372 54 6 1592 170 7 24 chr10 30482525 30482819 -115106469 - AluJo SINE Alu -18 294 6 2097 124 0 13 chr10 30482901 30483216 -115106072 - AluSx SINE Alu -1 311 1 2212 92 7 0 chr10 30483492 30483785 -115105503 - AluSc SINE Alu -14 295 1 1712 179 0 19 chr10 30484110 30484422 -115104866 - AluJo SINE Alu -6 306 1 1977 128 3 0 chr10 30484525 30484823 -115104465 + AluSq SINE Alu 1 299 -14 1646 171 0 7 chr10 30485002 30485301 -115103987 + AluJb SINE Alu 14 310 -2 279 343 97 6 chr10 30486015 30486190 -115103098 - MIR3 SINE MIR -6 202 12 * 908 223 66 0 chr10 30486163 30486360 -115102928 + MIR SINE MIR 53 262 0 2137 90 0 10 chr10 30486736 30487035 -115102253 - AluSx SINE Alu -16 296 1 944 180 0 27 chr10 30487234 30487417 -115101871 - FRAM SINE Alu -3 173 1 719 174 0 36 chr10 30487423 30487600 -115101688 - FLAM_C SINE Alu 0 172 1 2208 101 0 0 chr10 30487812 30488108 -115101180 - AluSx SINE Alu -16 296 1 33 56 0 0 chr10 30488108 30488162 -115101126 + AT_rich Low_complexity Low_complexity 1 54 0 1965 113 0 4 chr10 30488176 30488442 -115100846 - AluSg SINE Alu -45 265 1 39 0 0 20 chr10 30488442 30488478 -115100810 + AT_rich Low_complexity Low_complexity 1 37 -12 1810 155 0 7 chr10 30488478 30488769 -115100519 - AluJo SINE Alu -23 289 1 39 0 0 20 chr10 30488769 30488782 -115100506 + AT_rich Low_complexity Low_complexity 37 49 0 216 256 39 13 chr10 30488986 30489064 -115100224 + (TTGGGG)n Simple_repeat Simple_repeat 1 80 0 224 313 229 21 chr10 30489286 30489364 -115099924 + MIR SINE MIR 89 149 -113 2316 71 7 7 chr10 30489364 30489673 -115099615 + AluSx SINE Alu 1 309 -3 224 313 229 21 chr10 30489673 30489738 -115099550 + MIR SINE MIR 149 262 0 207 0 0 0 chr10 30490829 30490852 -115098436 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 1892 121 25 0 chr10 30490852 30491133 -115098155 - AluSq SINE Alu -25 288 1 375 304 74 7 chr10 30491261 30491409 -115097879 - MIR3 SINE MIR -49 159 2 2089 100 0 0 chr10 30492481 30492760 -115096528 + AluSx SINE Alu 27 305 -7 401 177 13 0 chr10 30492836 30492915 -115096373 - AluJo SINE Alu -3 309 230 948 185 45 6 chr10 30492916 30493094 -115096194 - AluJo SINE Alu -127 185 1 246 261 28 61 chr10 30493177 30493357 -115095931 - L1ME4a LINE L1 -21 6100 5927 244 97 0 0 chr10 30493370 30493401 -115095887 + MLT1A1 LTR MaLR 1 31 -334 685 174 0 72 chr10 30493401 30493539 -115095749 - FLAM_A SINE Alu -5 128 1 724 162 0 0 chr10 30493539 30493650 -115095638 - AluJo/FLAM SINE Alu -188 124 14 1786 173 21 27 chr10 30493658 30493993 -115095295 + MLT1A1 LTR MaLR 33 365 0 1629 176 3 20 chr10 30494003 30494305 -115094983 - AluJo SINE Alu -15 297 1 185 368 0 0 chr10 30494410 30494486 -115094802 + MIR SINE MIR 20 95 -167 1054 116 0 0 chr10 30494532 30494678 -115094610 + AluSg SINE Alu 1 146 -164 181 267 13 40 chr10 30494810 30494885 -115094403 + L3 LINE CR1 617 689 -888 1257 153 14 0 chr10 30495087 30495302 -115093986 - AluJb SINE Alu -8 304 87 1442 196 0 7 chr10 30496879 30497149 -115092139 - AluJb SINE Alu -20 292 25 1651 198 96 8 chr10 30497691 30498055 -115091233 + MSTD LTR MaLR 1 396 0 822 152 0 41 chr10 30498128 30498273 -115091015 - FLAM_C SINE Alu 0 143 5 282 206 194 45 chr10 30498530 30498685 -115090603 + MIR SINE MIR 35 212 -50 461 327 47 68 chr10 30498707 30498964 -115090324 + L2 LINE L2 2937 3198 -74 982 200 21 109 chr10 30498964 30498978 -115090310 - AluJo SINE Alu -1 301 287 927 109 0 0 chr10 30498978 30499116 -115090172 + (TTCC)n Simple_repeat Simple_repeat 3 140 0 982 200 21 109 chr10 30499116 30499431 -115089857 - AluJo SINE Alu -15 287 1 269 26 0 26 chr10 30499431 30499470 -115089818 + (TTTTA)n Simple_repeat Simple_repeat 5 42 0 1946 121 0 4 chr10 30499470 30499751 -115089537 - AluSx SINE Alu -32 280 1 461 327 47 68 chr10 30499751 30499830 -115089458 + L2 LINE L2 3195 3268 -4 1640 202 0 0 chr10 30500068 30500360 -115088928 + AluJb SINE Alu 6 297 -15 183 42 0 0 chr10 30500388 30500412 -115088876 + (TTG)n Simple_repeat Simple_repeat 1 24 0 595 273 82 6 chr10 30500912 30501095 -115088193 + MIR SINE MIR 15 211 -51 1274 133 10 0 chr10 30501128 30501324 -115087964 - AluJo SINE Alu -11 301 104 1859 105 0 14 chr10 30501324 30501601 -115087687 + AluSx SINE Alu 37 309 -3 288 264 28 0 chr10 30501649 30501721 -115087567 - MIR SINE MIR -2 260 187 2283 112 0 3 chr10 30504341 30504644 -115084644 + AluSg SINE Alu 1 302 -8 22 35 0 0 chr10 30504733 30504762 -115084526 + AT_rich Low_complexity Low_complexity 1 29 0 29 0 0 0 chr10 30504787 30504816 -115084472 + AT_rich Low_complexity Low_complexity 1 29 0 27 0 0 0 chr10 30505297 30505324 -115083964 + AT_rich Low_complexity Low_complexity 1 27 0 517 129 0 59 chr10 30506050 30506151 -115083137 + AluSg/x SINE Alu 218 312 0 195 183 26 174 chr10 30506193 30506263 -115083025 - MIR SINE MIR -2 260 212 1905 164 7 0 chr10 30506263 30506568 -115082720 - AluJb SINE Alu -5 307 1 195 183 26 174 chr10 30506568 30506612 -115082676 - MIR SINE MIR -50 212 163 22 0 0 0 chr10 30507517 30507539 -115081749 + AT_rich Low_complexity Low_complexity 1 22 0 2287 84 3 3 chr10 30509016 30509329 -115079959 - AluSp SINE Alu 0 313 1 1801 174 3 19 chr10 30509349 30509666 -115079622 - AluJb SINE Alu 0 312 1 732 74 0 11 chr10 30510536 30510631 -115078657 - AluY SINE Alu -179 132 39 2236 128 0 0 chr10 30510653 30510951 -115078337 - AluSx SINE Alu -14 298 1 1663 177 30 7 chr10 30510978 30511277 -115078011 + AluJo SINE Alu 1 306 -6 2261 123 0 0 chr10 30512373 30512674 -115076614 - AluSx SINE Alu -11 301 1 1977 117 75 34 chr10 30512894 30513252 -115076036 + THE1C LTR MaLR 1 373 -2 210 269 268 0 chr10 30514217 30514311 -115074977 - MIR SINE MIR -75 133 47 1676 186 3 31 chr10 30514316 30514634 -115074654 + AluJo SINE Alu 1 309 -3 2238 106 27 0 chr10 30514643 30514944 -115074344 + AluSg SINE Alu 1 309 -1 2241 87 32 23 chr10 30515220 30515530 -115073758 + AluSq SINE Alu 1 313 0 187 0 88 29 chr10 30516221 30516255 -115073033 + CT-rich Low_complexity Low_complexity 5 40 0 2209 100 17 0 chr10 30516269 30516559 -115072729 - AluSx SINE Alu -17 295 1 257 0 30 0 chr10 30516574 30516607 -115072681 + (TTTTC)n Simple_repeat Simple_repeat 1 34 0 1057 122 6 6 chr10 30516622 30516802 -115072486 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2027 160 0 0 chr10 30516824 30517131 -115072157 - AluSx SINE Alu -5 307 1 1719 169 3 10 chr10 30517214 30517510 -115071778 - AluJb SINE Alu -18 294 1 1131 257 78 50 chr10 30517544 30518296 -115070992 - L2 LINE L2 0 3313 2535 2387 95 0 3 chr10 30518296 30518600 -115070688 - AluSx SINE Alu -9 303 1 1131 257 78 50 chr10 30518600 30518677 -115070611 - L2 LINE L2 -778 2535 2462 992 28 14 14 chr10 30518864 30519006 -115070282 + (TCTA)n Simple_repeat Simple_repeat 3 144 0 229 152 13 101 chr10 30519272 30519351 -115069937 - L1P LINE L1 -3098 3048 2977 354 323 83 6 chr10 30519801 30519986 -115069302 - MIR SINE MIR -54 154 1 2257 103 17 0 chr10 30520000 30520301 -115068987 - AluSq SINE Alu -7 306 1 509 222 28 0 chr10 30520565 30520673 -115068615 - MIR SINE MIR -146 116 6 1763 146 0 32 chr10 30520925 30521229 -115068059 + AluJo SINE Alu 12 306 0 971 142 26 7 chr10 30521624 30521779 -115067509 - LTR26E LTR ERV1 0 622 465 211 150 33 0 chr10 30521809 30521869 -115067419 + (TA)n Simple_repeat Simple_repeat 1 62 0 682 144 9 9 chr10 30521916 30522027 -115067261 - AluJo SINE Alu -117 195 85 2285 129 10 50 chr10 30522027 30522429 -115066859 - LTR26B LTR ERV1 -145 386 1 2993 132 16 0 chr10 30522565 30523006 -115066282 + MER83 LTR ERV1 1 448 0 981 193 0 0 chr10 30523159 30523335 -115065953 + FRAM SINE Alu 1 174 -2 858 278 93 10 chr10 30523630 30523932 -115065356 + LTR33A LTR ERVL 1 327 -196 492 206 0 0 chr10 30523970 30524062 -115065226 + LTR33A LTR ERVL 419 510 -13 180 305 211 33 chr10 30524253 30524830 -115064458 - L2 LINE L2 -674 2640 1961 2961 112 7 2 chr10 30524831 30525261 -115064027 + MER57B LTR ERV1 3 434 0 796 151 7 7 chr10 30525698 30525850 -115063438 + CT-rich Low_complexity Low_complexity 3 154 0 2267 100 7 0 chr10 30525852 30526152 -115063136 - AluSx SINE Alu -2 310 9 310 208 25 138 chr10 30526739 30526898 -115062390 - MER5B DNA MER1_type -4 174 34 5180 151 49 36 chr10 30526957 30527581 -115061707 + L1MA9 LINE L1 5160 5774 -538 2111 126 3 0 chr10 30527581 30527890 -115061398 - AluSx SINE Alu 0 310 1 5180 151 49 36 chr10 30527890 30528242 -115061046 + L1MA9 LINE L1 5774 6120 -192 387 0 0 0 chr10 30528242 30528285 -115061003 + (CA)n Simple_repeat Simple_repeat 1 43 0 5180 151 49 36 chr10 30528285 30528405 -115060883 + L1MA9 LINE L1 6120 6270 -42 1510 210 28 3 chr10 30528405 30528691 -115060597 - AluJo SINE Alu -11 301 9 5180 151 49 36 chr10 30528691 30528721 -115060567 + L1MA9 LINE L1 6270 6298 -14 749 112 28 98 chr10 30528795 30528938 -115060350 - FLAM_C SINE Alu 0 133 1 334 259 62 0 chr10 30529794 30529875 -115059413 - L2 LINE L2 -2 3311 3226 2574 170 70 20 chr10 30529918 30530472 -115058816 + MER34C LTR ERV1 1 582 -3 423 275 46 51 chr10 30530575 30530780 -115058508 - L2 LINE L2 -234 3079 2875 2839 143 53 42 chr10 30530780 30531305 -115057983 - LTR26B LTR ERV1 0 531 1 423 275 46 51 chr10 30531305 30531384 -115057904 - L2 LINE L2 -438 2875 2797 1991 229 45 46 chr10 30531405 30531975 -115057313 + MER77 LTR ERV1 54 601 -4 318 245 11 43 chr10 30532012 30532106 -115057182 - L2 LINE L2 -513 2801 2711 199 54 54 0 chr10 30532106 30532143 -115057145 + (TA)n Simple_repeat Simple_repeat 2 40 0 30498 92 7 21 chr10 30532143 30532615 -115056673 - L1PA7 LINE L1 -6 6463 5986 2335 88 0 3 chr10 30532615 30532910 -115056378 - AluSc SINE Alu -13 296 3 30498 92 7 21 chr10 30532910 30536440 -115052848 - L1PA7 LINE L1 -483 5986 2557 2369 95 0 0 chr10 30536440 30536734 -115052554 - AluSq SINE Alu -19 294 1 30498 92 7 21 chr10 30536734 30538111 -115051177 - L1PA7 LINE L1 -3912 2557 1162 659 124 0 0 chr10 30538109 30538198 -115051090 - L1PA7 LINE L1 -6365 96 8 * 1888 142 7 33 chr10 30538209 30538511 -115050777 - AluJo SINE Alu -18 294 1 638 287 102 20 chr10 30538511 30538863 -115050425 - L2 LINE L2 -600 2714 2334 828 167 8 0 chr10 30538892 30539024 -115050264 - FLAM_C SINE Alu 0 133 1 257 94 0 0 chr10 30539126 30539179 -115050109 - LTR66 LTR ERVL -163 447 395 1193 157 4 68 chr10 30539668 30539903 -115049385 - AluJb SINE Alu -8 304 85 809 176 0 0 chr10 30539982 30540107 -115049181 - FLAM_A SINE Alu -8 125 1 63 44 0 0 chr10 30541233 30541324 -115047964 + AT_rich Low_complexity Low_complexity 1 91 0 228 163 31 62 chr10 30541332 30541461 -115047827 + (TTATA)n Simple_repeat Simple_repeat 2 126 0 2126 114 0 0 chr10 30541912 30542192 -115047096 - AluSg SINE Alu -30 280 1 2121 122 3 3 chr10 30543293 30543588 -115045700 - AluSx SINE Alu -17 295 1 23 0 0 0 chr10 30543904 30543927 -115045361 + AT_rich Low_complexity Low_complexity 1 23 0 254 226 73 48 chr10 30543928 30544052 -115045236 - L1MC5 LINE L1 -36 7925 7799 784 260 91 21 chr10 30544164 30544449 -115044839 + L1ME LINE L1 5260 5564 -600 1817 179 3 3 chr10 30544449 30544750 -115044538 + AluJb SINE Alu 1 301 -11 2256 121 0 0 chr10 30544830 30545135 -115044153 + AluSq SINE Alu 1 305 -8 2051 130 3 0 chr10 30545225 30545518 -115043770 + AluSx SINE Alu 16 309 -3 1830 209 61 2 chr10 30545848 30546241 -115043047 - MER90 LTR ERV1 -20 594 179 742 98 49 0 chr10 30546239 30546341 -115042947 - U6 snRNA snRNA 0 107 1 * 1045 210 5 10 chr10 30546339 30546544 -115042744 - MER90 LTR ERV1 -410 204 1 904 268 74 43 chr10 30546587 30546938 -115042350 - MLT1J LTR MaLR -7 504 143 256 311 33 25 chr10 30549849 30549971 -115039317 - MIR3 SINE MIR -32 176 54 25 31 0 0 chr10 30550038 30550070 -115039218 + AT_rich Low_complexity Low_complexity 1 32 0 2157 135 3 0 chr10 30550070 30550373 -115038915 + AluSx SINE Alu 1 304 -8 1169 178 5 0 chr10 30550498 30550689 -115038599 + AluJb SINE Alu 89 280 -32 1688 180 34 17 chr10 30551727 30552083 -115037205 - MLT1A1 LTR MaLR -3 362 1 2213 122 0 0 chr10 30552174 30552469 -115036819 - AluY SINE Alu -16 295 1 2043 83 0 24 chr10 30555326 30555652 -115033636 - AluY SINE Alu 0 319 1 1564 185 17 3 chr10 30555655 30555947 -115033341 - AluJo SINE Alu -16 296 1 2384 86 0 9 chr10 30556117 30556432 -115032856 - AluSq SINE Alu -1 312 1 189 0 0 0 chr10 30556643 30556664 -115032624 + (TCTCCC)n Simple_repeat Simple_repeat 5 25 0 9183 60 10 110 chr10 30556681 30558219 -115031069 + SVA Other Other 2 1385 -1 22 0 0 0 chr10 30558219 30558241 -115031047 + AT_rich Low_complexity Low_complexity 1 22 0 804 160 0 8 chr10 30558688 30558813 -115030475 + FLAM_C SINE Alu 1 124 -9 2679 96 14 14 chr10 30558832 30559196 -115030092 + THE1B LTR MaLR 1 364 0 890 173 23 12 chr10 30559196 30559369 -115029919 + FRAM SINE Alu 2 176 0 1903 141 138 23 chr10 30560305 30560689 -115028599 + MSTA LTR MaLR 1 428 0 469 253 81 81 chr10 30560728 30560949 -115028339 + HAL1 LINE L1 863 1083 -1424 635 107 0 0 chr10 30560951 30561035 -115028253 - AluJ SINE Alu -21 291 208 821 132 0 96 chr10 30561036 30561084 -115028204 - AluJ SINE Alu -161 151 100 2304 150 68 5 chr10 30561084 30561483 -115027805 - MSTA LTR MaLR 0 428 5 821 132 0 96 chr10 30561483 30561601 -115027687 - AluJ SINE Alu -212 100 1 874 178 0 0 chr10 30561602 30561752 -115027536 - MER5A DNA MER1_type -36 153 4 645 332 0 23 chr10 30561768 30561985 -115027303 + MIR SINE MIR 51 262 0 1416 148 65 7 chr10 30562166 30562443 -115026845 + AluJb SINE Alu 3 295 -17 1610 179 10 14 chr10 30562985 30563282 -115026006 + AluJb SINE Alu 1 296 -16 1054 159 0 0 chr10 30563797 30563967 -115025321 - FRAM SINE Alu -5 171 2 261 83 0 0 chr10 30565035 30565071 -115024217 + (CA)n Simple_repeat Simple_repeat 2 37 0 235 216 21 72 chr10 30565091 30565188 -115024100 - L1MC4 LINE L1 -1337 6705 6614 2324 168 0 57 chr10 30565197 30565267 -115024021 - Tigger2a DNA MER2_type -2274 434 362 1905 126 0 23 chr10 30565267 30565568 -115023720 - AluSx SINE Alu -18 294 1 2217 91 0 0 chr10 30565578 30565874 -115023414 - AluSq SINE Alu -16 297 2 2324 168 0 57 chr10 30565874 30566251 -115023037 - Tigger2a DNA MER2_type -2355 353 2 2037 92 4 0 chr10 30566425 30566686 -115022602 - MLT2A2 LTR ERVL -191 262 1 1445 196 112 16 chr10 30566686 30566997 -115022291 - MLT1D LTR MaLR -163 342 2 451 51 17 0 chr10 30567034 30567093 -115022195 + MADE1 DNA Mariner 3 62 -18 365 113 0 0 chr10 30567091 30567144 -115022144 + MADE1 DNA Mariner 28 80 0 * 1597 158 3 34 chr10 30567276 30567587 -115021701 + AluJo SINE Alu 1 302 0 1578 187 0 16 chr10 30567665 30567970 -115021318 - AluJo SINE Alu -12 300 1 208 333 71 0 chr10 30568388 30568472 -115020816 - MIR3 SINE MIR -11 197 108 362 158 53 26 chr10 30569110 30569186 -115020102 - MER58B DNA MER1_type -1 340 263 1692 158 3 7 chr10 30569202 30569493 -115019795 - AluJo SINE Alu -22 290 1 1431 41 0 0 chr10 30569520 30569690 -115019598 - AluY SINE Alu -18 293 124 394 141 295 0 chr10 30569702 30569780 -115019508 - MER58B DNA MER1_type -235 106 6 511 238 9 103 chr10 30569790 30570004 -115019284 - L2 LINE L2 -555 2759 2566 531 297 83 21 chr10 30571498 30571690 -115017598 - MIR SINE MIR -5 257 54 482 218 59 0 chr10 30571968 30572069 -115017219 - ORSL DNA AcHobo 0 275 169 403 335 18 36 chr10 30572379 30572546 -115016742 - MIR3 SINE MIR -24 184 21 29 47 0 0 chr10 30572898 30572941 -115016347 + AT_rich Low_complexity Low_complexity 1 43 0 3128 157 34 12 chr10 30572962 30573244 -115016044 - L1PA16 LINE L1 -9 6157 5883 1656 151 11 4 chr10 30573244 30573543 -115015745 + AluJb SINE Alu 3 303 0 3128 157 34 12 chr10 30573543 30573819 -115015469 - L1PA16 LINE L1 -283 5883 5586 553 229 8 0 chr10 30575427 30575545 -115013743 + MER94 DNA DNA 15 133 -1 24 0 0 0 chr10 30578429 30578453 -115010835 + AT_rich Low_complexity Low_complexity 1 24 0 423 265 124 80 chr10 30578531 30578958 -115010330 - L1ME4a LINE L1 -77 6044 5599 2157 188 8 48 chr10 30579097 30579540 -115009748 + MLT2B3 LTR ERVL 1 374 -146 1208 181 20 138 chr10 30579569 30579730 -115009558 + AluYb8 SINE Alu 1 101 -207 2096 114 3 0 chr10 30579730 30580020 -115009268 - AluSx SINE Alu -21 291 1 1208 181 20 138 chr10 30580020 30580206 -115009082 + AluYb8 SINE Alu 101 307 -1 181 365 144 19 chr10 30580324 30580532 -115008756 + L2 LINE L2 2381 2614 -700 894 123 0 36 chr10 30580799 30580937 -115008351 + FLAM_C SINE Alu 1 133 0 1142 176 22 36 chr10 30580974 30581196 -115008092 - MER20 DNA MER1_type 0 219 1 185 296 123 0 chr10 30581202 30581283 -115008005 + L2 LINE L2 2767 2857 -457 700 256 59 29 chr10 30581503 30581776 -115007512 - MLT1J1 LTR MaLR -165 281 1 22 0 0 0 chr10 30582011 30582033 -115007255 + AT_rich Low_complexity Low_complexity 1 22 0 2283 93 7 0 chr10 30582376 30582686 -115006602 + AluSx SINE Alu 1 312 0 323 270 0 0 chr10 30582802 30582876 -115006412 + AluJ/FLAM SINE Alu 1 74 -228 617 165 0 0 chr10 30582878 30582975 -115006313 + AluJb SINE Alu 190 286 -26 279 0 0 0 chr10 30582978 30583009 -115006279 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 1475 192 0 35 chr10 30583116 30583429 -115005859 + AluJo SINE Alu 1 302 -10 1491 153 102 4 chr10 30584578 30584852 -115004436 + AluJo SINE Alu 3 303 -9 2226 86 0 0 chr10 30584873 30585163 -115004125 + AluSx SINE Alu 1 290 -22 292 197 13 40 chr10 30586626 30586702 -115002586 + (CATATA)n Simple_repeat Simple_repeat 3 76 0 1639 163 14 17 chr10 30586733 30587027 -115002261 - AluJo SINE Alu -19 293 1 362 238 0 0 chr10 30587059 30587139 -115002149 + MIR3 SINE MIR 82 161 -47 195 388 0 0 chr10 30587491 30587576 -115001712 + L3 LINE CR1 400 484 -1093 1567 147 4 47 chr10 30587992 30588271 -115001017 + AluJo SINE Alu 1 267 -45 1680 204 70 103 chr10 30588587 30589220 -115000068 + LTR9 LTR ERV1 1 612 0 28 29 0 0 chr10 30589492 30589527 -114999761 + AT_rich Low_complexity Low_complexity 1 35 0 2297 62 0 3 chr10 30589680 30589971 -114999317 - AluY SINE Alu -1 310 21 1866 140 7 0 chr10 30590000 30590300 -114998988 + AluSx SINE Alu 3 304 -8 1684 139 76 0 chr10 30590939 30591227 -114998061 - L1MA2 LINE L1 -4 6300 5991 876 133 0 15 chr10 30591227 30591362 -114997926 - AluJo/FRAM SINE Alu -46 266 134 1543 148 6 88 chr10 30591363 30591694 -114997594 - AluSg SINE Alu -6 304 1 423 0 0 0 chr10 30592066 30592113 -114997175 + (CA)n Simple_repeat Simple_repeat 2 48 0 274 83 0 0 chr10 30594181 30594217 -114995071 - L2 LINE L2 -6 3307 3272 423 304 7 0 chr10 30594988 30595136 -114994152 + L1ME4a LINE L1 5971 6119 -2 1996 122 0 3 chr10 30597042 30597338 -114991950 - AluSx SINE Alu -17 295 1 4128 139 19 2 chr10 30597357 30597981 -114991307 + MER41B LTR ERV1 1 635 0 202 298 43 0 chr10 30597987 30598034 -114991254 + L2 LINE L2 3262 3310 -3 754 196 74 12 chr10 30598102 30598265 -114991023 + FRAM SINE Alu 4 176 0 421 154 22 0 chr10 30598303 30598394 -114990894 + GA-rich Low_complexity Low_complexity 3 95 0 249 274 14 60 chr10 30599067 30599200 -114990088 + L1MC4a LINE L1 4489 4610 -1536 2150 179 18 18 chr10 30599200 30599596 -114989692 - MSTD LTR MaLR 0 396 1 249 274 14 60 chr10 30599596 30599677 -114989611 + L1MC4a LINE L1 4610 4693 -1453 1560 171 20 43 chr10 30599678 30599982 -114989306 - AluJo SINE Alu -15 297 1 2026 120 3 0 chr10 30600041 30600332 -114988956 + AluSg SINE Alu 1 292 -18 305 294 28 28 chr10 30600378 30600487 -114988801 + L1MC4a LINE L1 5217 5325 -821 2299 109 3 0 chr10 30600566 30600888 -114988400 - pTR5 LTR ERV1 -2041 397 75 297 198 55 63 chr10 30600888 30601021 -114988267 - LTR30 LTR ERV1 -94 606 375 3258 165 61 32 chr10 30601021 30601782 -114987506 - pTR5 LTR ERV1 -439 1999 6 515 261 79 62 chr10 30601847 30602138 -114987150 + L1MC4a LINE L1 5530 5825 -1983 1929 112 54 3 chr10 30602143 30602438 -114986850 + AluSx SINE Alu 1 310 -2 1359 116 98 5 chr10 30602510 30602734 -114986554 + AluSx SINE Alu 60 304 -8 214 162 0 0 chr10 30602862 30602899 -114986389 + (TG)n Simple_repeat Simple_repeat 1 37 0 233 233 17 0 chr10 30603223 30603283 -114986005 + L1 LINE L1 5221 5281 -865 2439 54 40 0 chr10 30603511 30603808 -114985480 - AluY SINE Alu -2 309 1 2618 96 53 50 chr10 30604805 30604957 -114984331 - LTR56 LTR ERV1 0 445 295 2313 83 21 3 chr10 30604957 30605247 -114984041 + AluSc SINE Alu 1 295 -14 2618 96 53 50 chr10 30605247 30605531 -114983757 - LTR56 LTR ERV1 -150 295 8 30 59 0 0 chr10 30605997 30606048 -114983240 + AT_rich Low_complexity Low_complexity 1 51 0 22 35 0 0 chr10 30606060 30606089 -114983199 + AT_rich Low_complexity Low_complexity 1 29 0 1518 166 0 4 chr10 30606171 30606418 -114982870 - AluJo SINE Alu -9 303 58 1112 166 19 9 chr10 30606451 30606662 -114982626 - L1PA16 LINE L1 -12 6154 5942 1862 159 0 30 chr10 30607089 30607385 -114981903 + AluJo SINE Alu 1 287 -25 408 20 0 0 chr10 30607385 30607434 -114981854 + (CATA)n Simple_repeat Simple_repeat 2 50 0 255 191 0 0 chr10 30608815 30608878 -114980410 + CT-rich Low_complexity Low_complexity 2 64 0 229 253 242 22 chr10 30609633 30609815 -114979473 + L1ME3A LINE L1 2400 2621 -3525 183 222 0 0 chr10 30609841 30609886 -114979402 + (TATG)n Simple_repeat Simple_repeat 3 47 0 315 299 13 0 chr10 30609955 30610032 -114979256 - MER2 DNA MER2_type 0 345 268 204 170 21 21 chr10 30610041 30610088 -114979200 + A-rich Low_complexity Low_complexity 4 50 0 1247 129 5 15 chr10 30610107 30610308 -114978980 - MER2 DNA MER2_type -134 211 13 958 295 144 18 chr10 30610356 30610441 -114978847 + L1ME3A LINE L1 2797 2870 -3276 2579 68 0 0 chr10 30610441 30610749 -114978539 + AluSq SINE Alu 1 308 -5 958 295 144 18 chr10 30610749 30611919 -114977369 + L1ME3A LINE L1 2870 4256 -1890 459 247 151 89 chr10 30611946 30612238 -114977050 - LTR33 LTR ERVL 0 521 248 396 0 0 0 chr10 30612238 30612282 -114977006 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 1856 131 0 7 chr10 30612291 30612566 -114976722 - AluSx SINE Alu -39 273 1 2292 117 0 0 chr10 30612572 30612879 -114976409 - AluSx SINE Alu -5 307 1 459 247 151 89 chr10 30612879 30613054 -114976234 - LTR33 LTR ERVL -284 237 7 960 249 56 108 chr10 30613130 30613285 -114976003 + L1ME3A LINE L1 4495 4657 -1489 2055 111 50 0 chr10 30613285 30613565 -114975723 - AluSx SINE Alu -10 302 9 960 249 56 108 chr10 30613565 30614233 -114975055 + L1ME3A LINE L1 4657 5275 -871 995 274 53 12 chr10 30614309 30614648 -114974640 + L1ME3A LINE L1 5276 5628 -534 340 135 0 0 chr10 30614648 30614700 -114974588 + MER116 DNA Mariner 29 80 0 363 265 89 56 chr10 30614701 30615023 -114974265 + L1ME3A LINE L1 5641 5975 -195 2046 128 3 26 chr10 30615312 30615618 -114973670 + AluSx SINE Alu 1 299 -13 199 133 133 83 chr10 30615801 30615861 -114973427 + L2 LINE L2 3246 3308 -5 234 284 59 10 chr10 30615870 30615972 -114973316 + L1ME LINE L1 5373 5479 -2329 263 247 0 52 chr10 30616189 30616266 -114973022 + L1ME LINE L1 5746 5818 -303 2373 81 0 13 chr10 30616333 30616640 -114972648 - AluY SINE Alu -8 303 1 2084 130 0 7 chr10 30617361 30617660 -114971628 - AluSx SINE Alu -15 297 1 1776 130 0 11 chr10 30618245 30618507 -114970781 + AluJb SINE Alu 40 298 -14 1687 100 0 9 chr10 30618664 30618893 -114970395 - AluSc SINE Alu 0 309 83 40 0 0 0 chr10 30619671 30619711 -114969577 + AT_rich Low_complexity Low_complexity 1 40 0 1810 159 40 10 chr10 30620309 30620487 -114968801 - AluJo SINE Alu -1 311 119 195 42 0 0 chr10 30620487 30620511 -114968777 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1810 159 40 10 chr10 30620511 30620634 -114968654 - AluJo SINE Alu -193 119 1 536 198 0 37 chr10 30621736 30622108 -114967180 + CT-rich Low_complexity Low_complexity 1 180 0 295 229 0 0 chr10 30622108 30622169 -114967119 - AluJo SINE Alu 0 673 241 1426 154 13 21 chr10 30622282 30622515 -114966773 - AluJo SINE Alu -81 231 1 1683 188 4 0 chr10 30622947 30623224 -114966064 + AluJb SINE Alu 3 280 -32 741 162 31 12 chr10 30623224 30623466 -114965822 + GA-rich Low_complexity Low_complexity 1 246 0 1515 133 34 19 chr10 30623988 30624251 -114965037 + L1MA6 LINE L1 6034 6300 0 1627 185 7 7 chr10 30624367 30624643 -114964645 - AluJo SINE Alu -36 276 1 279 0 0 0 chr10 30625164 30625195 -114964093 + (A)n Simple_repeat Simple_repeat 1 31 0 1573 132 64 39 chr10 30625896 30626176 -114963112 - AluJo SINE Alu -15 297 11 1517 200 22 0 chr10 30627416 30627691 -114961597 + AluJb SINE Alu 1 281 -31 359 250 23 0 chr10 30628404 30628492 -114960796 + L1MC4 LINE L1 6614 6703 -1339 222 118 0 0 chr10 30628495 30628529 -114960759 + (TA)n Simple_repeat Simple_repeat 1 34 0 2199 112 0 3 chr10 30628529 30628823 -114960465 - AluSx SINE Alu -19 293 1 259 274 113 116 chr10 30629446 30629826 -114959462 - L2 LINE L2 -131 3182 2804 1673 253 37 16 chr10 30629933 30630443 -114958845 - L2 LINE L2 -685 2629 2109 758 295 114 47 chr10 30630447 30630698 -114958590 - L2 LINE L2 -2477 837 604 3668 153 25 2 chr10 30630698 30631287 -114958001 - LTR26 LTR ERV1 0 603 1 758 295 114 47 chr10 30631287 30631432 -114957856 - L2 LINE L2 -2710 604 470 2407 94 0 0 chr10 30631432 30631730 -114957558 + AluSc SINE Alu 1 298 -11 758 295 114 47 chr10 30631730 30631970 -114957318 - L2 LINE L2 -2844 470 157 868 187 28 16 chr10 30632662 30632844 -114956444 - AluJo SINE Alu -11 301 118 259 128 0 0 chr10 30632858 30632897 -114956391 - MER65B LTR ERV1 -492 39 1 369 200 36 27 chr10 30633000 30633110 -114956178 + L2 LINE L2 2435 2545 -769 1000 136 0 0 chr10 30633116 30633256 -114956032 + FRAM SINE Alu 1 140 -36 545 167 0 0 chr10 30633256 30633346 -114955942 - AluJ/FLAM SINE Alu -221 91 2 1023 329 96 7 chr10 30633347 30633901 -114955387 + HERV16 LTR ERVL 151 753 -4243 519 277 99 0 chr10 30634040 30634181 -114955107 + HERV16 LTR ERVL 910 1064 -3932 433 257 71 0 chr10 30634230 30634343 -114954945 + HERV16 LTR ERVL 1150 1270 -3726 2114 142 3 0 chr10 30634496 30634791 -114954497 + AluSx SINE Alu 1 296 -16 854 279 66 4 chr10 30634805 30635049 -114954239 + HERV16 LTR ERVL 1686 1944 -3052 713 309 115 26 chr10 30635074 30635543 -114953745 + LTR16B LTR ERVL 8 462 -2 1928 141 7 3 chr10 30636852 30637135 -114952153 + AluJb SINE Alu 18 301 -11 2123 107 7 7 chr10 30637202 30637500 -114951788 - AluSc SINE Alu -7 302 5 226 252 101 25 chr10 30638646 30638761 -114950527 + MLT1L LTR MaLR 135 258 -357 1030 244 115 65 chr10 30638761 30639257 -114950031 + LTR33 LTR ERVL 1 521 0 514 310 83 20 chr10 30639257 30639557 -114949731 + MLT1L LTR MaLR 252 570 -45 1573 174 28 25 chr10 30639601 30639883 -114949405 - AluJo SINE Alu -25 287 5 180 77 0 0 chr10 30640196 30640222 -114949066 + (TG)n Simple_repeat Simple_repeat 2 27 0 22 80 0 0 chr10 30640688 30640738 -114948550 + AT_rich Low_complexity Low_complexity 1 50 0 1800 175 0 7 chr10 30640901 30641192 -114948096 - AluJo SINE Alu -23 289 1 1881 156 0 31 chr10 30641793 30642113 -114947175 + AluJb SINE Alu 1 310 -2 266 260 16 57 chr10 30642161 30642284 -114947004 + MIR SINE MIR 74 191 -71 183 331 58 16 chr10 30642700 30642942 -114946346 + L2 LINE L2 2510 2761 -553 1285 290 133 37 chr10 30643160 30643204 -114946084 + L2 LINE L2 1423 1461 -1853 2092 125 0 23 chr10 30643204 30643507 -114945781 - AluSx SINE Alu -16 296 1 1285 290 133 37 chr10 30643507 30643958 -114945330 + L2 LINE L2 1461 1867 -1447 2077 136 10 0 chr10 30643958 30644267 -114945021 - AluSx SINE Alu 0 312 1 1285 290 133 37 chr10 30644267 30644843 -114944445 + L2 LINE L2 1867 2598 -716 204 125 0 0 chr10 30644845 30644877 -114944411 + (TTC)n Simple_repeat Simple_repeat 2 33 0 454 239 26 17 chr10 30645006 30645123 -114944165 + MIR3 SINE MIR 83 200 -8 2305 74 0 0 chr10 30645353 30645676 -114943612 - AluY SINE Alu 0 323 1 442 260 49 16 chr10 30645950 30646073 -114943215 - L2 LINE L2 0 3313 3187 1024 182 51 14 chr10 30646215 30646429 -114942859 - L1MA9 LINE L1 -153 6159 5938 470 118 40 0 chr10 30646429 30646504 -114942784 + L1MA9 LINE L1 6234 6312 0 2462 74 3 0 chr10 30646657 30646955 -114942333 + AluY SINE Alu 1 299 -12 2083 112 21 0 chr10 30647865 30648151 -114941137 - AluSx SINE Alu -8 304 13 769 214 14 0 chr10 30648366 30648511 -114940777 - Tigger3(Golem) DNA MER2_type -2 3027 2881 2211 93 3 7 chr10 30648545 30648847 -114940441 - AluY SINE Alu -7 304 4 236 279 156 39 chr10 30648992 30649146 -114940142 + MER3 DNA MER1_type 2 126 -83 247 204 0 19 chr10 30649359 30649413 -114939875 + (CA)n Simple_repeat Simple_repeat 1 53 0 2931 7 0 0 chr10 30650140 30650450 -114938838 - AluY SINE Alu -1 310 1 318 220 0 0 chr10 30650488 30650588 -114938700 + (TG)n Simple_repeat Simple_repeat 1 100 0 823 121 0 0 chr10 30651334 30651450 -114937838 + FLAM_C SINE Alu 20 135 -8 21 57 0 0 chr10 30651457 30651492 -114937796 + AT_rich Low_complexity Low_complexity 1 35 0 2211 100 28 0 chr10 30651504 30651793 -114937495 + AluSg SINE Alu 3 299 -11 364 217 7 28 chr10 30652038 30652181 -114937107 + T-rich Low_complexity Low_complexity 3 142 0 22 35 0 0 chr10 30652345 30652374 -114936914 + AT_rich Low_complexity Low_complexity 1 29 0 202 122 73 0 chr10 30652470 30652511 -114936777 + (TATG)n Simple_repeat Simple_repeat 1 44 0 1018 178 0 6 chr10 30653527 30653696 -114935592 + FRAM SINE Alu 1 161 -15 1373 102 5 5 chr10 30654809 30655005 -114934283 - AluSg/x SINE Alu 0 312 117 677 233 133 89 chr10 30655053 30655396 -114933892 - MER34 LTR ERV1 0 542 167 1939 137 0 7 chr10 30655396 30655695 -114933593 + AluSx SINE Alu 1 297 -15 677 233 133 89 chr10 30655695 30655870 -114933418 - MER34 LTR ERV1 -375 167 1 1353 151 5 0 chr10 30656082 30656294 -114932994 + AluSx SINE Alu 1 213 -99 691 286 44 18 chr10 30657319 30657546 -114931742 + MIR SINE MIR 28 260 -2 4491 51 7 0 chr10 30657603 30658154 -114931134 - L1PA7 LINE L1 -4 6150 5596 1431 159 11 30 chr10 30658798 30659062 -114930226 + AluJo SINE Alu 18 276 -36 180 0 0 0 chr10 30659067 30659087 -114930201 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 234 276 66 0 chr10 30659099 30659175 -114930113 + MER5A DNA MER1_type 52 132 -57 2106 109 10 3 chr10 30659221 30659523 -114929765 - AluSc SINE Alu -5 304 1 1650 136 110 4 chr10 30661698 30661970 -114927318 + AluSx SINE Alu 1 301 -11 5053 185 140 104 chr10 30662413 30664107 -114925181 - MER52A LTR ERV1 0 1755 1 367 340 79 46 chr10 30664785 30665088 -114924200 + L1MC4a LINE L1 4369 4681 -1465 355 287 92 8 chr10 30665100 30665351 -114923937 + L1MC4a LINE L1 4742 5013 -1133 2061 133 0 0 chr10 30665364 30665665 -114923623 + AluSx SINE Alu 1 301 -11 476 283 23 40 chr10 30665719 30666072 -114923216 + L1MC5 LINE L1 7581 7927 -34 764 179 0 0 chr10 30666075 30666198 -114923090 + FLAM_C SINE Alu 2 124 -19 1994 123 7 0 chr10 30666210 30666510 -114922778 + AluSx SINE Alu 1 302 -10 315 259 60 43 chr10 30666510 30666617 -114922671 + L1MC4a LINE L1 5028 5139 -1007 204 138 46 0 chr10 30666649 30666714 -114922574 + (TA)n Simple_repeat Simple_repeat 2 69 0 555 244 249 41 chr10 30666846 30667301 -114921987 + L1MC4a LINE L1 5297 5403 -743 1214 125 87 168 chr10 30667403 30667549 -114921739 - MER44D DNA MER2_type -1882 609 453 1494 194 0 14 chr10 30667549 30667833 -114921455 + AluJo SINE Alu 1 280 -32 1214 125 87 168 chr10 30667833 30667895 -114921393 - MER44D DNA MER2_type -2038 453 388 1855 116 0 72 chr10 30667895 30668215 -114921073 + AluSx SINE Alu 1 297 -15 1214 125 87 168 chr10 30668215 30668374 -114920914 - MER44D DNA MER2_type -2103 388 1 2229 95 0 0 chr10 30669421 30669715 -114919573 - AluSq SINE Alu -19 294 1 22 0 0 0 chr10 30669725 30669747 -114919541 + AT_rich Low_complexity Low_complexity 1 22 0 278 310 100 0 chr10 30670690 30670790 -114918498 - MIR SINE MIR -150 112 3 484 245 37 31 chr10 30671926 30672089 -114917199 - MER5B DNA MER1_type -13 165 2 865 215 6 0 chr10 30672214 30672386 -114916902 + FRAM SINE Alu 1 172 -4 2080 110 0 19 chr10 30672702 30673010 -114916278 + AluSx SINE Alu 1 302 -10 2331 157 96 26 chr10 30674015 30674513 -114914775 - L1MB3 LINE L1 0 6183 5651 1379 218 200 43 chr10 30674571 30674719 -114914569 - MER50 LTR ERV1 -19 715 592 1898 93 72 0 chr10 30674719 30674997 -114914291 + AluSx SINE Alu 1 298 -14 1379 218 200 43 chr10 30674997 30675458 -114913830 - MER50 LTR ERV1 -142 592 10 1832 149 0 7 chr10 30675931 30676226 -114913062 - AluJo SINE Alu -15 297 5 2147 135 28 38 chr10 30677524 30677562 -114911726 - L1MC1 LINE L1 -15 6318 6281 1855 173 0 0 chr10 30677562 30677868 -114911420 + AluJb SINE Alu 1 306 -6 2147 135 28 38 chr10 30677868 30678086 -114911202 - L1MC1 LINE L1 -52 6281 6065 1584 165 71 9 chr10 30678086 30678426 -114910862 - MER46B DNA MER2_type 0 236 1 2147 135 28 38 chr10 30678426 30678560 -114910728 - L1MC1 LINE L1 -268 6065 5931 2014 138 0 3 chr10 30680145 30680450 -114908838 - AluSx SINE Alu -8 304 1 443 195 195 0 chr10 30681286 30681409 -114907879 + L2 LINE L2 3167 3313 0 2385 71 3 3 chr10 30682223 30682532 -114906756 - AluSg1 SINE Alu 0 309 1 1014 191 92 97 chr10 30683168 30683634 -114905654 - MER4C LTR ERV1 0 465 2 2604 96 14 3 chr10 30685206 30685570 -114903718 - L1PA13 LINE L1 -2 6161 5794 471 114 0 0 chr10 30685888 30685967 -114903321 + L1MA5A LINE L1 6214 6292 -5 1349 184 25 22 chr10 30686776 30686900 -114902388 + AluJb SINE Alu 4 126 -186 1506 186 72 0 chr10 30686900 30687191 -114902097 + AluJb SINE Alu 1 312 0 1349 184 25 22 chr10 30687191 30687343 -114901945 + AluJb SINE Alu 126 281 -31 2253 174 22 26 chr10 30687555 30688014 -114901274 - LTR32 LTR ERVL 0 471 15 1948 131 0 7 chr10 30688662 30688959 -114900329 + AluJb SINE Alu 1 295 -17 1587 160 29 11 chr10 30689488 30689805 -114899483 - AluJo SINE Alu 0 324 3 542 176 9 19 chr10 30690021 30690129 -114899159 - L1MB3 LINE L1 -8 6175 6069 202 235 118 35 chr10 30690229 30690314 -114898974 + L3 LINE CR1 1365 1456 -121 1103 113 40 17 chr10 30690319 30690496 -114898792 + MER4D LTR ERV1 1 181 -722 5365 123 12 10 chr10 30690496 30691302 -114897986 + L1PA15 LINE L1 5350 6157 -8 3360 141 65 73 chr10 30691302 30691998 -114897290 + MER4D LTR ERV1 183 872 0 3145 122 8 112 chr10 30692613 30693254 -114896034 + MER4B LTR ERV1 1 574 -36 536 237 0 52 chr10 30693692 30693827 -114895461 + L2 LINE L2 3180 3307 -6 192 307 0 67 chr10 30693832 30693907 -114895381 + L2 LINE L2 3133 3202 -70 200 182 0 0 chr10 30694734 30694767 -114894521 + CT-rich Low_complexity Low_complexity 2 34 0 354 45 0 0 chr10 30694770 30694814 -114894474 + (CA)n Simple_repeat Simple_repeat 2 45 0 2237 112 0 0 chr10 30695280 30695584 -114893704 - AluSx SINE Alu -8 304 1 218 296 57 23 chr10 30695823 30695911 -114893377 + L2 LINE L2 2954 3044 -228 1537 185 14 20 chr10 30696023 30696320 -114892968 - AluJo SINE Alu -17 295 1 393 169 60 0 chr10 30696325 30696408 -114892880 - L1PA16 LINE L1 0 6166 6079 988 160 0 11 chr10 30696498 30696679 -114892609 + AluJb SINE Alu 134 312 0 206 31 0 31 chr10 30696986 30697018 -114892270 + (TTTG)n Simple_repeat Simple_repeat 4 34 0 1971 115 4 0 chr10 30697018 30697297 -114891991 - AluSx SINE Alu -32 280 1 3729 111 23 6 chr10 30697642 30698157 -114891131 + MER1A DNA MER1_type 4 527 0 1488 152 17 52 chr10 30698501 30698790 -114890498 + AluJo SINE Alu 2 280 -32 3474 101 8 10 chr10 30699912 30700406 -114888882 - LOR1a LTR ERV1 0 497 5 1353 228 37 34 chr10 30700704 30701002 -114888286 - AluJo SINE Alu -2 300 2 2011 191 50 46 chr10 30701097 30701600 -114887688 + MLT1D LTR MaLR 1 505 0 242 238 262 0 chr10 30701754 30701838 -114887450 + L2 LINE L2 3208 3313 0 1618 170 17 17 chr10 30701883 30702172 -114887116 - AluJb SINE Alu -23 289 1 1789 121 83 78 chr10 30702415 30702614 -114886674 + THE1C LTR MaLR 1 204 -171 225 0 0 0 chr10 30702614 30702639 -114886649 + (TC)n Simple_repeat Simple_repeat 1 25 0 1789 121 83 78 chr10 30702639 30702812 -114886476 + THE1C LTR MaLR 204 375 0 1956 128 0 0 chr10 30703006 30703319 -114885969 + AluSx SINE Alu 1 313 0 316 360 84 27 chr10 30703321 30703582 -114885706 - L2 LINE L2 -20 3252 2977 226 280 20 0 chr10 30703582 30703632 -114885656 - L2 LINE L2 -12 3260 3210 22 0 0 0 chr10 30703640 30703662 -114885626 + AT_rich Low_complexity Low_complexity 1 22 0 745 168 0 0 chr10 30703717 30703836 -114885452 - AluJb SINE Alu -1 311 193 1035 245 32 0 chr10 30703891 30704107 -114885181 - MER58A DNA MER1_type -1 223 1 1834 178 3 3 chr10 30706082 30706386 -114882902 - AluJo SINE Alu -7 305 2 734 282 61 69 chr10 30706531 30707273 -114882015 + L2 LINE L2 2539 3283 -30 2277 115 0 0 chr10 30707446 30707741 -114881547 + AluSx SINE Alu 1 295 -17 380 127 0 0 chr10 30707965 30708020 -114881268 - Alu SINE Alu -6 296 242 2088 221 74 46 chr10 30708293 30708349 -114880939 - L1ME1 LINE L1 -5 6161 6108 1709 183 7 17 chr10 30708349 30708650 -114880638 - AluJo SINE Alu -14 298 1 2088 221 74 46 chr10 30708650 30709244 -114880044 - L1ME1 LINE L1 -58 6108 5493 662 62 0 0 chr10 30709246 30709327 -114879961 - THE1B LTR MaLR 0 364 284 474 54 0 0 chr10 30709327 30709383 -114879905 - THE1B LTR MaLR -308 56 1 1249 165 0 19 chr10 30710000 30710206 -114879082 + AluJb SINE Alu 1 202 -110 2291 85 3 0 chr10 30710393 30710706 -114878582 - AluY SINE Alu 0 314 1 1703 139 68 25 chr10 30710968 30711249 -114878039 - AluJo SINE Alu -6 306 14 243 229 0 0 chr10 30711482 30711543 -114877745 + (TATG)n Simple_repeat Simple_repeat 3 63 0 1805 98 124 0 chr10 30712568 30712833 -114876455 + AluSx SINE Alu 5 302 0 1875 151 0 7 chr10 30713107 30713391 -114875897 - AluJo SINE Alu -30 282 1 198 0 0 0 chr10 30713419 30713441 -114875847 + (TG)n Simple_repeat Simple_repeat 2 23 0 191 303 0 15 chr10 30713980 30714046 -114875242 - L2 LINE L2 -214 3058 2994 804 172 0 8 chr10 30714299 30714433 -114874855 + FLAM_C SINE Alu 1 133 0 2343 94 0 0 chr10 30715078 30715376 -114873912 - AluSc SINE Alu -11 298 1 1707 168 18 4 chr10 30715659 30715933 -114873355 - AluJb SINE Alu -34 278 1 1626 178 34 20 chr10 30715933 30716226 -114873062 - AluJo SINE Alu -15 297 1 1673 186 10 10 chr10 30717481 30717788 -114871500 - AluJb SINE Alu -5 307 1 183 143 29 0 chr10 30718739 30718774 -114870514 + MER5A DNA MER1_type 1 36 -153 215 269 104 0 chr10 30718974 30719041 -114870247 - L2 LINE L2 -1 3312 3239 521 278 44 28 chr10 30719119 30719299 -114869989 + MIR SINE MIR 6 188 -74 2401 156 44 29 chr10 30719379 30719833 -114869455 - LOR1b LTR ERV1 0 461 1 898 180 4 146 chr10 30720024 30720094 -114869194 + L1MB8 LINE L1 3909 3987 -2159 2057 112 41 0 chr10 30720094 30720388 -114868900 + AluSc SINE Alu 1 306 -3 898 180 4 146 chr10 30720388 30720563 -114868725 + L1MB8 LINE L1 3987 4119 -2027 2815 178 34 38 chr10 30720563 30720586 -114868702 + MLT2B3 LTR ERVL 1 23 -531 2270 180 36 79 chr10 30720586 30721165 -114868123 + MLT2B3 LTR ERVL 1 554 0 2815 178 34 38 chr10 30721165 30721697 -114867591 + MLT2B3 LTR ERVL 23 554 0 4540 189 56 37 chr10 30721699 30722753 -114866535 + L1MB8 LINE L1 4117 5149 -1029 2193 134 132 5 chr10 30722753 30723133 -114866155 - MSTA LTR MaLR 0 428 1 761 163 23 0 chr10 30723133 30723262 -114866026 + FLAM_C SINE Alu 1 132 -1 4540 189 56 37 chr10 30723262 30724219 -114865069 + L1MB8 LINE L1 5148 6165 -13 255 31 0 0 chr10 30724224 30724256 -114865032 + (TG)n Simple_repeat Simple_repeat 2 33 0 553 284 209 48 chr10 30724282 30724613 -114864675 - L2 LINE L2 -799 2515 2239 279 0 0 0 chr10 30724613 30724644 -114864644 + (GA)n Simple_repeat Simple_repeat 2 32 0 553 284 209 48 chr10 30724644 30724957 -114864331 - L2 LINE L2 -1075 2239 1767 1085 195 108 16 chr10 30725331 30725582 -114863706 - AluJo SINE Alu -25 287 14 2180 172 34 3 chr10 30726116 30726500 -114862788 - MSTD LTR MaLR 0 396 1 1550 172 0 69 chr10 30727088 30727407 -114861881 - AluJo SINE Alu -15 297 1 216 0 0 0 chr10 30728268 30728292 -114860996 + (T)n Simple_repeat Simple_repeat 1 24 0 237 33 0 0 chr10 30728609 30728639 -114860649 + (CA)n Simple_repeat Simple_repeat 2 31 0 228 163 0 0 chr10 30728917 30728960 -114860328 + A-rich Low_complexity Low_complexity 1 43 0 414 217 104 26 chr10 30730131 30730246 -114859042 - L2 LINE L2 -2 3311 3188 2146 125 0 0 chr10 30730680 30730976 -114858312 - AluSx SINE Alu -16 296 1 686 175 0 0 chr10 30731563 30731683 -114857605 - AluSg/x SINE Alu 0 312 193 2143 123 0 7 chr10 30733278 30733571 -114855717 + AluSx SINE Alu 1 291 -21 2036 125 25 0 chr10 30733795 30734147 -114855141 - AluSx SINE Alu 0 359 1 2012 114 11 0 chr10 30734658 30734975 -114854313 - AluSq SINE Alu 0 320 1 795 131 31 15 chr10 30735008 30735138 -114854150 - FLAM_C SINE Alu -1 132 1 24 32 0 0 chr10 30735201 30735232 -114854056 + AT_rich Low_complexity Low_complexity 1 31 0 2248 111 10 0 chr10 30736497 30736794 -114852494 + AluSq SINE Alu 1 300 -13 2235 119 3 0 chr10 30736795 30737098 -114852190 + AluSc SINE Alu 1 304 -5 646 233 0 0 chr10 30737175 30737308 -114851980 + FLAM_A SINE Alu 6 138 -4 2235 100 0 13 chr10 30737784 30738084 -114851204 - AluSq SINE Alu -17 296 1 2056 192 54 18 chr10 30738084 30738524 -114850764 - L1MD1 LINE L1 -7 6235 5777 1016 241 98 50 chr10 30738533 30738757 -114850531 - L1MD1 LINE L1 -1185 4961 4749 2223 96 0 26 chr10 30738757 30739059 -114850229 - AluSx SINE Alu -16 296 3 1016 241 98 50 chr10 30739059 30739155 -114850133 - L1MD1 LINE L1 -1397 4749 4659 1565 186 7 24 chr10 30739155 30739474 -114849814 + AluJb SINE Alu 1 314 0 1016 241 98 50 chr10 30739474 30739571 -114849717 - L1MD1 LINE L1 -1487 4659 4522 206 121 0 0 chr10 30741883 30741916 -114847372 + (TTTTTG)n Simple_repeat Simple_repeat 4 36 0 313 282 77 51 chr10 30742819 30742975 -114846313 + MER20B DNA MER1_type 5 164 -619 2304 98 0 16 chr10 30743114 30743420 -114845868 - AluSg SINE Alu -8 302 2 207 0 0 0 chr10 30743509 30743532 -114845756 + (TG)n Simple_repeat Simple_repeat 2 24 0 2298 119 0 3 chr10 30743853 30744164 -114845124 - AluSx SINE Alu -1 311 2 2290 106 0 0 chr10 30744577 30744878 -114844410 - AluSg SINE Alu -9 301 1 1107 83 0 0 chr10 30744878 30745011 -114844277 - AluSg SINE Alu -177 133 1 340 289 66 90 chr10 30746303 30746383 -114842905 - MIR SINE MIR 0 262 182 1615 154 41 41 chr10 30746383 30746675 -114842613 - AluJo SINE Alu -18 294 3 340 289 66 90 chr10 30746675 30746850 -114842438 - MIR SINE MIR -80 182 13 276 218 115 0 chr10 30746910 30746997 -114842291 - MER5A DNA MER1_type -84 105 9 1623 178 10 17 chr10 30750376 30750668 -114838620 - AluJo SINE Alu -22 290 1 2108 116 3 3 chr10 30750938 30751231 -114838057 - AluSq SINE Alu -20 293 1 2559 56 0 31 chr10 30751246 30751567 -114837721 - AluY SINE Alu 0 311 1 203 235 20 0 chr10 30752223 30752274 -114837014 - MIR3 SINE MIR -32 176 125 22 0 0 0 chr10 30752578 30752600 -114836688 + AT_rich Low_complexity Low_complexity 1 22 0 954 160 89 0 chr10 30752754 30752967 -114836321 - L1 LINE L1 -1593 4553 4322 4083 90 3 7 chr10 30752969 30753536 -114835752 + L1PB2 LINE L1 5586 6150 -1 2278 108 0 0 chr10 30753544 30753839 -114835449 + AluSc SINE Alu 1 295 -14 1608 183 0 4 chr10 30753877 30754145 -114835143 + AluJo SINE Alu 1 267 -45 24 0 0 0 chr10 30754161 30754185 -114835103 + AT_rich Low_complexity Low_complexity 1 24 0 236 170 0 94 chr10 30756309 30756415 -114832873 + (ACATG)n Simple_repeat Simple_repeat 4 99 0 2236 77 32 3 chr10 30756727 30757012 -114832276 + AluSx SINE Alu 1 293 -19 186 133 0 0 chr10 30757123 30757153 -114832135 + (TAA)n Simple_repeat Simple_repeat 2 31 0 26 30 0 0 chr10 30757170 30757203 -114832085 + AT_rich Low_complexity Low_complexity 1 33 0 924 128 19 6 chr10 30757512 30757668 -114831620 + L1PA16 LINE L1 6005 6162 -4 2149 146 3 0 chr10 30757929 30758238 -114831050 - AluJb SINE Alu 0 312 3 256 267 89 11 chr10 30758699 30758789 -114830499 - L2 LINE L2 -6 3266 3170 189 107 0 0 chr10 30761139 30761167 -114828121 + (TTA)n Simple_repeat Simple_repeat 2 29 0 183 184 0 0 chr10 30761820 30761858 -114827430 + CT-rich Low_complexity Low_complexity 4 41 0 243 61 0 0 chr10 30761868 30761901 -114827387 + (CA)n Simple_repeat Simple_repeat 2 34 0 417 39 0 0 chr10 30761901 30761952 -114827336 + (TCCA)n Simple_repeat Simple_repeat 4 54 0 2635 55 0 3 chr10 30762677 30762988 -114826300 - AluY SINE Alu -1 310 1 205 191 0 32 chr10 30764546 30764609 -114824679 + GA-rich Low_complexity Low_complexity 2 62 0 30 0 0 0 chr10 30764780 30764810 -114824478 + AT_rich Low_complexity Low_complexity 1 30 0 1707 148 0 22 chr10 30764821 30765091 -114824197 - AluJo SINE Alu -23 289 26 230 326 133 0 chr10 30766409 30766507 -114822781 + MIR SINE MIR 49 159 -103 429 196 84 9 chr10 30766531 30766638 -114822650 - MER63 DNA MER1_type -273 789 675 249 281 21 30 chr10 30767007 30767173 -114822115 - MIR SINE MIR -17 191 30 2420 83 3 3 chr10 30767931 30768243 -114821045 - AluSx SINE Alu 0 312 1 477 297 70 16 chr10 30768685 30768941 -114820347 + L3 LINE CR1 1109 1378 -199 22 70 0 0 chr10 30769458 30769501 -114819787 + AT_rich Low_complexity Low_complexity 1 43 0 2132 87 61 0 chr10 30769601 30769878 -114819410 + AluY SINE Alu 1 294 -17 23 33 0 0 chr10 30770244 30770274 -114819014 + AT_rich Low_complexity Low_complexity 1 30 0 546 235 53 21 chr10 30770309 30770496 -114818792 - L1MB8 LINE L1 0 6178 5986 512 148 30 20 chr10 30771263 30771364 -114817924 + L1MC4 LINE L1 7813 7914 -128 273 138 72 58 chr10 30771697 30771790 -114817498 + (TATAA)n Simple_repeat Simple_repeat 5 102 -42 1947 157 0 3 chr10 30771790 30772077 -114817211 - AluSx SINE Alu -26 286 1 273 138 72 58 chr10 30772077 30772121 -114817167 + (TATAA)n Simple_repeat Simple_repeat 102 144 0 346 268 138 8 chr10 30772651 30772774 -114816514 + MER20B DNA MER1_type 1 139 -644 26 0 0 0 chr10 30773144 30773170 -114816118 + AT_rich Low_complexity Low_complexity 1 26 0 1925 157 0 7 chr10 30773324 30773617 -114815671 + AluJb SINE Alu 1 291 -21 204 97 0 0 chr10 30773641 30773672 -114815616 + (GGGGA)n Simple_repeat Simple_repeat 5 35 0 213 121 0 0 chr10 30774257 30774290 -114814998 + (TG)n Simple_repeat Simple_repeat 2 34 0 25 83 0 0 chr10 30775204 30775264 -114814024 + AT_rich Low_complexity Low_complexity 1 60 0 285 75 0 0 chr10 30775368 30775408 -114813880 + (TG)n Simple_repeat Simple_repeat 2 41 0 213 266 0 47 chr10 30775434 30775498 -114813790 + L2 LINE L2 3180 3240 -73 1587 174 10 40 chr10 30776060 30776358 -114812930 - AluJo SINE Alu -23 289 1 1097 159 11 0 chr10 30776383 30776559 -114812729 - AluJb SINE Alu 0 312 135 204 262 167 0 chr10 30776681 30776765 -114812523 + L2 LINE L2 3132 3229 -43 191 61 30 0 chr10 30777105 30777138 -114812150 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 2177 98 0 7 chr10 30777140 30777425 -114811863 - AluSq SINE Alu -30 283 1 678 194 0 8 chr10 30777603 30777727 -114811561 + FLAM_C SINE Alu 1 123 -10 2241 82 0 53 chr10 30778139 30778443 -114810845 - AluSg SINE Alu -10 300 13 23 86 0 0 chr10 30778471 30778529 -114810759 + AT_rich Low_complexity Low_complexity 1 58 0 1864 164 0 22 chr10 30778581 30778893 -114810395 - AluJo SINE Alu -7 305 1 1894 150 3 20 chr10 30780260 30780566 -114808722 - AluJo SINE Alu -11 301 1 222 235 0 0 chr10 30780625 30780676 -114808612 + T-rich Low_complexity Low_complexity 1 51 0 7870 19 0 15 chr10 30780686 30781781 -114807507 - L1PA3 LINE L1 0 6155 5066 2522 87 0 0 chr10 30784838 30785147 -114804141 - AluSc SINE Alu 0 309 1 1955 129 16 19 chr10 30785939 30786248 -114803040 - AluJb SINE Alu -3 309 2 242 268 28 0 chr10 30787012 30787083 -114802205 + GA-rich Low_complexity Low_complexity 4 76 0 934 235 176 12 chr10 30787115 30787434 -114801854 + L3 LINE CR1 771 1141 -436 972 62 78 0 chr10 30787511 30787640 -114801648 + MER85 DNA T2_type 1 139 0 1655 112 42 0 chr10 30787930 30788189 -114801099 + L1MA2 LINE L1 6035 6304 0 582 181 211 0 chr10 30789264 30789397 -114799891 - L1ME2 LINE L1 0 6164 6004 304 246 94 58 chr10 30790162 30790300 -114798988 + MIR SINE MIR 44 186 -76 1523 256 93 9 chr10 30790433 30790971 -114798317 - L2 LINE L2 -434 2880 2298 1811 143 3 18 chr10 30791514 30791843 -114797445 - AluJo SINE Alu 0 325 1 1660 241 21 26 chr10 30791880 30792299 -114796989 - MER47B DNA MER2_type 0 418 2 186 71 0 0 chr10 30793583 30793611 -114795677 + (TTTTA)n Simple_repeat Simple_repeat 1 28 0 2306 108 0 3 chr10 30793787 30794094 -114795194 - AluSq SINE Alu -7 306 1 1427 151 20 0 chr10 30794301 30794546 -114794742 - L1PA15 LINE L1 -2 6163 5914 334 321 127 27 chr10 30795862 30796083 -114793205 - MIR SINE MIR 0 262 20 1740 190 3 3 chr10 30796191 30796501 -114792787 - AluJo SINE Alu -2 310 1 303 122 0 0 chr10 30797631 30797680 -114791608 + (GAA)n Simple_repeat Simple_repeat 2 50 0 674 131 0 9 chr10 30800160 30800267 -114789021 + FLAM_C SINE Alu 25 130 -13 1905 157 0 16 chr10 30800520 30800833 -114788455 - AluJo SINE Alu -4 308 1 404 317 6 19 chr10 30801324 30801485 -114787803 - L1MC5 LINE L1 -109 7852 7694 2297 82 7 0 chr10 30801519 30801801 -114787487 - AluSx SINE Alu -3 309 26 1851 165 7 0 chr10 30801974 30802265 -114787023 - AluJb SINE Alu -19 293 1 2374 76 7 10 chr10 30802693 30802997 -114786291 + AluSx SINE Alu 1 303 -9 2366 102 0 0 chr10 30802997 30803301 -114785987 + AluSc SINE Alu 1 304 -5 2369 110 0 3 chr10 30804119 30804429 -114784859 + AluSc SINE Alu 1 309 0 180 125 0 0 chr10 30805080 30805112 -114784176 + (TTTA)n Simple_repeat Simple_repeat 3 34 0 1585 156 107 0 chr10 30805114 30805377 -114783911 - AluJb SINE Alu -21 291 1 441 154 71 13 chr10 30809051 30809205 -114780083 + L1MA4A LINE L1 6055 6278 -25 2196 113 0 0 chr10 30809470 30809781 -114779507 - AluY SINE Alu 0 311 1 1741 156 0 29 chr10 30809783 30810097 -114779191 - AluJo SINE Alu -7 305 1 2099 118 0 0 chr10 30811843 30812149 -114777139 - AluSx SINE Alu -6 306 1 219 88 0 0 chr10 30812297 30812331 -114776957 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 1853 134 3 3 chr10 30812333 30812616 -114776672 - AluSx SINE Alu -29 283 1 1837 122 3 52 chr10 30813265 30813593 -114775695 - AluJo SINE Alu 0 312 1 228 280 38 61 chr10 30814685 30814817 -114774471 + MIR SINE MIR 65 193 -69 197 187 27 107 chr10 30815917 30815992 -114773296 - MIR3 SINE MIR -30 178 110 778 136 40 0 chr10 30816047 30816172 -114773116 + AluJo SINE Alu 6 135 -177 1361 213 3 20 chr10 30816181 30816477 -114772811 + AluJo SINE Alu 1 291 -21 25 108 0 0 chr10 30816477 30816579 -114772709 + AT_rich Low_complexity Low_complexity 1 102 0 1779 96 122 4 chr10 30817163 30817434 -114771854 - AluSg1 SINE Alu -6 303 1 325 216 0 14 chr10 30820322 30820396 -114768892 - Charlie5 DNA MER1_type -27 2585 2513 1628 170 42 0 chr10 30820532 30820820 -114768468 + AluJb SINE Alu 1 300 -12 2255 99 0 3 chr10 30820852 30821156 -114768132 - AluSp SINE Alu -10 303 1 657 119 0 0 chr10 30821342 30821443 -114767845 + (TC)n Simple_repeat Simple_repeat 2 102 0 324 243 0 0 chr10 30823100 30823248 -114766040 + (TG)n Simple_repeat Simple_repeat 2 149 0 1299 186 107 25 chr10 30824548 30824865 -114764423 - MER2 DNA MER2_type 0 344 2 5796 191 23 18 chr10 30824872 30825354 -114763934 - L1MC1 LINE L1 0 6333 5855 2032 94 3 20 chr10 30825354 30825674 -114763614 - AluSq SINE Alu 0 313 9 5796 191 23 18 chr10 30825674 30827022 -114762266 - L1MC1 LINE L1 -478 5855 4491 270 164 0 0 chr10 30828014 30828069 -114761219 + (CA)n Simple_repeat Simple_repeat 2 56 0 224 284 34 11 chr10 30829228 30829316 -114759972 + CT-rich Low_complexity Low_complexity 1 90 0 889 266 46 4 chr10 30829317 30829576 -114759712 - L1MC4 LINE L1 -152 7890 7621 1513 185 10 10 chr10 30831732 30832024 -114757264 - AluJo SINE Alu -20 292 1 1988 116 3 3 chr10 30832294 30832587 -114756701 - AluSq SINE Alu -20 293 1 2275 83 0 22 chr10 30832605 30832918 -114756370 - AluSx SINE Alu -1 311 6 183 362 0 0 chr10 30833799 30833846 -114755442 - MIR SINE MIR -139 69 23 23 0 0 0 chr10 30834538 30834561 -114754727 + AT_rich Low_complexity Low_complexity 1 23 0 925 183 26 65 chr10 30836484 30836529 -114752759 + MER58A DNA MER1_type 4 49 -2371 1814 143 30 7 chr10 30836529 30836830 -114752458 - AluJo SINE Alu -4 308 1 925 183 26 65 chr10 30836830 30837013 -114752275 + MER58A DNA MER1_type 49 223 -1 256 185 15 146 chr10 30838077 30838207 -114751081 - MLT1K LTR MaLR -8 580 468 676 294 37 15 chr10 30838295 30838649 -114750639 - MLT1K LTR MaLR -174 414 21 184 339 189 16 chr10 30839242 30839564 -114749724 + L3 LINE CR1 1199 1576 -1 837 149 0 22 chr10 30840121 30840255 -114749033 - FLAM_C SINE Alu 0 133 3 1818 159 0 0 chr10 30840875 30841176 -114748112 + AluJb SINE Alu 1 301 -11 310 272 33 11 chr10 30842333 30842425 -114746863 - MIR SINE MIR -150 112 19 231 330 75 9 chr10 30843856 30843962 -114745326 + MER5B DNA MER1_type 66 178 0 23 0 0 0 chr10 30844932 30844955 -114744333 + AT_rich Low_complexity Low_complexity 1 23 0 433 264 55 31 chr10 30847174 30847337 -114741951 - MER5B DNA MER1_type 0 178 12 1805 147 0 16 chr10 30848400 30848706 -114740582 + AluJo SINE Alu 12 312 0 1197 183 39 0 chr10 30849203 30849433 -114739855 - L1MA6 LINE L1 -75 6225 5987 21 36 0 0 chr10 30849501 30849529 -114739759 + AT_rich Low_complexity Low_complexity 1 28 0 387 56 0 0 chr10 30849535 30849589 -114739699 + (CA)n Simple_repeat Simple_repeat 2 55 0 193 219 16 94 chr10 30851058 30851122 -114738166 - L2 LINE L2 0 3272 3214 376 315 27 40 chr10 30851333 30851482 -114737806 - MIR SINE MIR -107 155 9 1683 143 0 14 chr10 30851769 30852048 -114737240 - AluJb SINE Alu -1 311 37 571 219 128 16 chr10 30852139 30852326 -114736962 + MIR SINE MIR 20 227 -35 2031 102 3 10 chr10 30853560 30853853 -114735435 + AluSg SINE Alu 1 291 -19 1346 188 41 11 chr10 30854031 30854302 -114734986 + AluJo SINE Alu 14 292 -20 413 255 223 48 chr10 30854954 30855330 -114733958 + L2 LINE L2 2871 3312 -1 1697 140 0 19 chr10 30855412 30855676 -114733612 + AluJb SINE Alu 21 279 -33 459 0 0 0 chr10 30856077 30856128 -114733160 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 1525 152 57 8 chr10 30856133 30856397 -114732891 - AluJo SINE Alu -35 277 1 1032 150 0 6 chr10 30858586 30858753 -114730535 - AluJb SINE Alu -3 309 144 237 200 0 0 chr10 30861599 30861644 -114727644 - L2 LINE L2 -4 3268 3224 296 309 53 0 chr10 30861741 30861835 -114727453 - L2 LINE L2 -53 3219 3121 285 98 0 0 chr10 30862057 30862098 -114727190 + (TA)n Simple_repeat Simple_repeat 2 42 0 3110 167 124 3 chr10 30862114 30862760 -114726528 + L1MB7 LINE L1 5452 6176 -8 783 212 59 6 chr10 30863011 30863181 -114726107 - AluJb SINE Alu -12 300 122 402 262 161 0 chr10 30863611 30863760 -114725528 - MIR SINE MIR -10 252 80 24 32 0 0 chr10 30863935 30863966 -114725322 + AT_rich Low_complexity Low_complexity 1 31 0 261 285 94 60 chr10 30863998 30864233 -114725055 - L1ME LINE L1 -255 5866 5624 338 201 40 7 chr10 30864410 30864559 -114724729 + (TA)n Simple_repeat Simple_repeat 1 154 0 393 291 147 26 chr10 30864562 30864943 -114724345 - L1ME LINE L1 -751 5395 4969 207 296 43 43 chr10 30865204 30865390 -114723898 - MIR SINE MIR -13 249 64 618 185 23 118 chr10 30865431 30865672 -114723616 - MLT1J LTR MaLR -206 409 110 181 180 20 40 chr10 30865751 30865801 -114723487 - MIR SINE MIR -137 71 23 1828 177 0 7 chr10 30866256 30866566 -114722722 - AluJo SINE Alu -2 310 3 2642 140 74 21 chr10 30869498 30869801 -114719487 - LOR1a LTR ERV1 -1 496 158 1713 171 24 11 chr10 30869801 30870088 -114719200 - AluJo SINE Alu -13 299 9 2642 140 74 21 chr10 30870088 30870255 -114719033 - LOR1a LTR ERV1 -339 158 1 613 309 39 0 chr10 30870392 30870599 -114718689 - MIR SINE MIR -3 259 45 1512 228 0 3 chr10 30870620 30870914 -114718374 - AluJo SINE Alu -19 293 1 25 0 0 0 chr10 30871213 30871238 -114718050 + AT_rich Low_complexity Low_complexity 1 25 0 957 172 10 44 chr10 30871404 30871608 -114717680 + AluJo SINE Alu 101 297 -15 1624 141 62 72 chr10 30871613 30871904 -114717384 + AluJo SINE Alu 1 288 -24 39 0 0 0 chr10 30871908 30871947 -114717341 + AT_rich Low_complexity Low_complexity 1 39 0 25 0 0 0 chr10 30872844 30872869 -114716419 + AT_rich Low_complexity Low_complexity 1 25 0 2071 120 14 3 chr10 30873676 30873968 -114715320 + AluSx SINE Alu 1 295 -17 2362 109 0 0 chr10 30874793 30875097 -114714191 + AluSx SINE Alu 3 306 -6 1537 228 35 83 chr10 30875806 30876260 -114713028 + L1MB7 LINE L1 5668 6096 -88 1679 181 14 0 chr10 30876260 30876553 -114712735 + AluJo SINE Alu 1 297 -15 1537 228 35 83 chr10 30876553 30876615 -114712673 + L1MB7 LINE L1 6096 6159 -25 965 175 0 0 chr10 30876864 30877018 -114712270 + AluJb SINE Alu 148 301 -11 1408 211 24 10 chr10 30877334 30877632 -114711656 + AluJo SINE Alu 1 302 -10 1848 173 7 0 chr10 30878382 30878677 -114710611 + AluJb SINE Alu 1 297 -15 1887 157 7 3 chr10 30879322 30879609 -114709679 + AluJo SINE Alu 1 288 -24 1929 150 45 25 chr10 30879684 30880043 -114709245 + MLT1B LTR MaLR 22 387 -3 194 188 29 43 chr10 30880084 30880153 -114709135 - L2 LINE L2 -213 3059 2992 675 299 44 6 chr10 30882825 30883146 -114706142 - LTR16B LTR ERVL -1 463 131 1995 147 0 13 chr10 30883173 30883479 -114705809 - MER1B DNA MER1_type 0 339 38 736 270 57 5 chr10 30884238 30884449 -114704839 + MIR SINE MIR 31 252 -10 1645 186 40 15 chr10 30884494 30884822 -114704466 - MER58B DNA MER1_type 0 341 6 1335 167 22 13 chr10 30885176 30885404 -114703884 + MSTA LTR MaLR 1 230 -198 1254 204 26 0 chr10 30885420 30885650 -114703638 + MSTA LTR MaLR 191 426 0 411 250 26 0 chr10 30885711 30885827 -114703461 - MIR SINE MIR -62 200 82 3536 55 23 5 chr10 30885849 30886285 -114703003 + MLT2A1 LTR ERVL 1 444 0 2310 98 101 24 chr10 30886285 30886663 -114702625 + MER61C LTR ERV1 28 434 0 4683 158 11 66 chr10 30887228 30888184 -114701104 + MER4D LTR ERV1 1 903 0 636 83 31 10 chr10 30888860 30888956 -114700332 + MER4A LTR ERV1 1 98 -566 1839 146 6 19 chr10 30888956 30889306 -114699982 + MER4A LTR ERV1 261 664 0 274 290 0 0 chr10 30889322 30889391 -114699897 + (TA)n Simple_repeat Simple_repeat 1 69 0 2599 138 62 15 chr10 30889767 30890238 -114699050 + L1MB3 LINE L1 5684 6176 -7 234 0 0 0 chr10 30890389 30890415 -114698873 + (TA)n Simple_repeat Simple_repeat 2 27 0 1406 239 7 47 chr10 30890417 30890823 -114698465 - MLT2C1 LTR ERVL -7 390 1 225 0 0 0 chr10 30890826 30890851 -114698437 + (TA)n Simple_repeat Simple_repeat 2 26 0 339 96 0 0 chr10 30890866 30890918 -114698370 + (TG)n Simple_repeat Simple_repeat 1 52 0 591 184 208 0 chr10 30891144 30891269 -114698019 - FRAM SINE Alu -20 156 6 2008 165 72 78 chr10 30891322 30891861 -114697427 + LTR10A LTR ERV1 13 548 -61 973 201 73 29 chr10 30891870 30892143 -114697145 + LTR10A-int LTR ERV1 1 285 -6364 252 272 65 22 chr10 30892405 30892497 -114696791 + LTR10A-int LTR ERV1 975 1070 -5579 5760 85 9 47 chr10 30892505 30893653 -114695635 + HERV17 LTR ERV1 704 1719 -5177 388 202 167 0 chr10 30893656 30893740 -114695548 - LTR8 LTR ERV1 -438 253 156 1649 95 42 4 chr10 30893740 30894003 -114695285 + Harlequin LTR ERV1 1807 2079 -4817 647 149 28 0 chr10 30894003 30894110 -114695178 + MSTD LTR MaLR 287 396 0 1394 262 128 31 chr10 30894122 30894722 -114694566 - MER21B LTR ERV1 -144 787 38 611 151 0 28 chr10 30894735 30894841 -114694447 - FRAM SINE Alu -10 166 64 6963 131 22 18 chr10 30894939 30897124 -114692164 + L1MA3 LINE L1 4113 6305 0 246 327 40 25 chr10 30897197 30897399 -114691889 + HAL1 LINE L1 1513 1717 -790 28 0 0 0 chr10 30897580 30897608 -114691680 + AT_rich Low_complexity Low_complexity 1 28 0 1412 222 29 0 chr10 30897842 30898121 -114691167 + AluJo SINE Alu 1 287 -25 226 264 236 24 chr10 30898187 30898741 -114690547 + L1M4 LINE L1 2220 2891 -3255 1407 196 14 39 chr10 30899186 30899472 -114689816 + AluJo SINE Alu 1 279 -33 927 172 0 9 chr10 30899472 30899703 -114689585 + GA-rich Low_complexity Low_complexity 1 228 0 1083 91 11 11 chr10 30899795 30899971 -114689317 + (GAAA)n Simple_repeat Simple_repeat 1 176 0 192 259 0 0 chr10 30900048 30900102 -114689186 + GA-rich Low_complexity Low_complexity 4 57 0 880 132 0 13 chr10 30900122 30900281 -114689007 + (GGAA)n Simple_repeat Simple_repeat 4 160 0 2401 53 11 0 chr10 30900591 30900876 -114688412 - AluY SINE Alu -23 288 1 1905 176 76 83 chr10 30901960 30902476 -114686812 + MLT2B3 LTR ERVL 35 546 -8 414 130 13 52 chr10 30902702 30902779 -114686509 - FLAM SINE Alu -12 131 58 3426 197 24 83 chr10 30902982 30904012 -114685276 - LTR5 LTR ERVK 0 969 1 238 294 73 9 chr10 30904401 30904412 -114684876 - MIR SINE MIR -95 167 158 1859 167 52 0 chr10 30904412 30904741 -114684547 - MER7A DNA MER2_type -1 345 2 238 294 73 9 chr10 30904741 30904838 -114684450 - MIR SINE MIR -104 158 52 553 250 42 24 chr10 30905320 30905488 -114683800 - MER5B DNA MER1_type -4 174 4 807 209 11 11 chr10 30905500 30905677 -114683611 - MER5B DNA MER1_type -1 177 1 1935 263 39 26 chr10 30906025 30906610 -114682678 + MLT1E LTR MaLR 1 593 0 201 405 8 16 chr10 30906635 30906761 -114682527 - MIR SINE MIR -64 144 20 242 0 0 0 chr10 30906928 30906955 -114682333 - L1P LINE L1 -2054 4092 4066 * 4628 10 0 0 chr10 30906954 30907466 -114681822 + L1HS LINE L1 5644 6155 0 252 0 0 0 chr10 30907471 30907499 -114681789 + (A)n Simple_repeat Simple_repeat 1 28 0 190 283 38 0 chr10 30908081 30908134 -114681154 - MIR SINE MIR -78 130 76 304 266 28 0 chr10 30909875 30909984 -114679304 - L1M2 LINE L1 -443 5857 5746 * 461 237 9 9 chr10 30909982 30910096 -114679192 - L1MA5 LINE L1 -441 5859 5746 431 246 8 23 chr10 30910094 30910224 -114679064 - L1MA6 LINE L1 -441 5859 5732 * 434 286 68 13 chr10 30910391 30910625 -114678663 + L1MEd LINE L1 811 1057 -5062 21 57 0 0 chr10 30910878 30910913 -114678375 + AT_rich Low_complexity Low_complexity 1 35 0 2283 108 16 0 chr10 30910914 30911219 -114678069 - AluSx SINE Alu -2 310 1 1063 172 0 0 chr10 30911270 30911433 -114677855 + AluJb SINE Alu 1 163 -149 478 200 0 0 chr10 30911435 30911520 -114677768 - FLAM_A SINE Alu -35 107 23 1921 223 21 13 chr10 30911527 30911997 -114677291 + L1MB4 LINE L1 4246 4719 -1427 1859 184 24 3 chr10 30911997 30912371 -114676917 + L1MB4 LINE L1 5797 6178 -2 1967 151 0 20 chr10 30912830 30913135 -114676153 + AluSx SINE Alu 1 299 -13 2182 217 93 74 chr10 30913136 30913669 -114675619 + L1MC4 LINE L1 7104 7662 -380 2208 97 0 72 chr10 30913669 30913989 -114675299 + AluSx SINE Alu 1 297 -15 2182 217 93 74 chr10 30913989 30914360 -114674928 + L1MC4 LINE L1 7662 8025 -17 24 32 0 0 chr10 30914468 30914499 -114674789 + AT_rich Low_complexity Low_complexity 1 31 0 385 271 28 9 chr10 30914902 30915009 -114674279 + L2 LINE L2 3197 3305 -8 207 300 0 0 chr10 30915985 30916045 -114673243 - L2 LINE L2 -559 2755 2696 261 98 0 0 chr10 30916872 30916913 -114672375 + (TAA)n Simple_repeat Simple_repeat 1 41 0 1499 154 96 32 chr10 30917265 30917545 -114671743 - AluJo SINE Alu -12 300 3 259 326 121 0 chr10 30917884 30918016 -114671272 - MIR3 SINE MIR -27 181 34 740 197 0 0 chr10 30918557 30918694 -114670594 + AluJo SINE Alu 1 137 -175 1518 185 27 20 chr10 30918694 30918986 -114670302 + AluJb SINE Alu 1 294 -18 275 230 68 0 chr10 30919130 30919204 -114670084 + MER116 DNA Mariner 1 79 -1 416 35 0 17 chr10 30919593 30919651 -114669637 - L1PA7 LINE L1 -3 6151 6095 2505 71 3 0 chr10 30919755 30920064 -114669224 + AluSx SINE Alu 1 310 -2 257 154 0 0 chr10 30921848 30921887 -114667401 + L2 LINE L2 3214 3252 -20 1988 142 3 16 chr10 30921976 30922279 -114667009 + AluSx SINE Alu 1 299 -13 467 258 38 15 chr10 30922310 30922442 -114666846 + L2 LINE L2 2956 3090 -223 2638 127 52 40 chr10 30922447 30922982 -114666306 + MER57B-int LTR ERV1 1018 3648 -4168 1659 136 11 0 chr10 30922967 30923246 -114666042 - MER41-int LTR ERV1 -3342 4195 3914 * 1661 130 0 8 chr10 30923244 30923506 -114665782 - MER41-int LTR ERV1 -2435 2580 2321 753 54 0 0 chr10 30923506 30923599 -114665689 - AluYa5/8 SINE Alu -16 294 202 1697 89 4 4 chr10 30923599 30923847 -114665441 - MER41-int LTR ERV1 -2868 3078 2831 568 92 51 31 chr10 30923831 30923929 -114665359 + MER57B-int LTR ERV1 4905 5004 -2533 * 12096 117 54 9 chr10 30923928 30924792 -114664496 + MER57B-int LTR ERV1 5249 6073 -1464 2322 105 3 0 chr10 30924792 30925097 -114664191 - AluSp SINE Alu -7 306 1 12096 117 54 9 chr10 30925097 30926052 -114663236 + MER57B-int LTR ERV1 6073 7150 -387 673 141 23 31 chr10 30926052 30926180 -114663108 + LTR54B LTR ERV1 5 131 -367 1643 78 122 0 chr10 30926181 30926411 -114662877 + MER57B-int LTR ERV1 7280 7537 0 2849 128 7 2 chr10 30926411 30926840 -114662448 + MER57B LTR ERV1 1 431 -3 1580 153 4 8 chr10 30926842 30927091 -114662197 + AluJo SINE Alu 50 297 -15 24 0 0 0 chr10 30927091 30927115 -114662173 + AT_rich Low_complexity Low_complexity 1 24 0 5548 202 20 21 chr10 30927164 30928229 -114661059 - L1MC1 LINE L1 -2 6331 5267 1720 186 3 3 chr10 30928229 30928520 -114660768 - AluJb SINE Alu -20 292 2 5548 202 20 21 chr10 30928520 30929720 -114659568 - L1MC1 LINE L1 -1066 5267 4071 429 200 22 0 chr10 30929718 30929808 -114659480 - L1M4 LINE L1 -1762 4384 4293 * 1889 182 3 6 chr10 30929841 30930154 -114659134 - AluJb SINE Alu 0 312 1 1500 297 84 45 chr10 30930881 30931548 -114657740 + HERV16 LTR ERVL 1585 2277 -2719 1054 144 0 0 chr10 30931616 30931776 -114657512 + FRAM SINE Alu 5 164 -2 2264 87 0 3 chr10 30931785 30932073 -114657215 + AluY SINE Alu 18 304 -7 198 281 0 16 chr10 30932243 30932307 -114656981 - L2 LINE L2 -4 3268 3206 916 179 0 31 chr10 30932665 30932827 -114656461 - FRAM SINE Alu -19 157 1 422 228 19 95 chr10 30933845 30933952 -114655336 + MIR SINE MIR 90 183 -79 1640 182 7 13 chr10 30933952 30934254 -114655034 + AluJo SINE Alu 1 300 -12 422 228 19 95 chr10 30934254 30934304 -114654984 + MIR SINE MIR 183 235 -27 7214 188 151 19 chr10 30934852 30936403 -114652885 - MER52A LTR ERV1 0 1755 1 1833 160 0 3 chr10 30936752 30937064 -114652224 + AluJb SINE Alu 1 311 0 744 187 27 13 chr10 30937681 30937831 -114651457 + FRAM SINE Alu 4 155 -21 1189 193 166 14 chr10 30937831 30938193 -114651095 - L1MC4 LINE L1 -738 7304 6888 349 232 128 16 chr10 30938557 30938682 -114650606 - L2 LINE L2 -4 3309 3171 2713 140 20 27 chr10 30939180 30939425 -114649863 + L1PB4 LINE L1 5708 5950 -206 1854 158 32 0 chr10 30939425 30939704 -114649584 + AluJb SINE Alu 3 290 -22 2713 140 20 27 chr10 30939704 30939907 -114649381 + L1PB4 LINE L1 5950 6153 -3 24 0 0 0 chr10 30940297 30940321 -114648967 + AT_rich Low_complexity Low_complexity 1 24 0 186 71 0 0 chr10 30940372 30940400 -114648888 + (TTTA)n Simple_repeat Simple_repeat 4 31 0 258 263 25 0 chr10 30940999 30941079 -114648209 - MIR3 SINE MIR -33 175 94 548 233 47 31 chr10 30941506 30941635 -114647653 - MER20 DNA MER1_type -36 183 53 333 47 0 0 chr10 30941691 30941734 -114647554 + (CA)n Simple_repeat Simple_repeat 2 44 0 2103 111 0 80 chr10 30941734 30941922 -114647366 - AluSx SINE Alu -13 299 146 2333 97 0 3 chr10 30941922 30942222 -114647066 - AluSx SINE Alu -13 299 1 2103 111 0 80 chr10 30942222 30942358 -114646930 - AluSx SINE Alu -166 146 1 292 342 44 13 chr10 30942372 30942530 -114646758 - MIR SINE MIR -71 191 29 217 352 9 29 chr10 30942647 30942752 -114646536 + L3b LINE CR1 1479 1581 -2 2226 114 3 0 chr10 30943521 30943818 -114645470 + AluSx SINE Alu 1 298 -14 1921 145 0 40 chr10 30944739 30945063 -114644225 - AluJb SINE Alu -1 311 1 863 141 0 0 chr10 30945065 30945193 -114644095 - AluJo/FLAM SINE Alu -179 133 6 29 84 0 0 chr10 30945390 30945461 -114643827 + AT_rich Low_complexity Low_complexity 1 71 0 201 279 31 112 chr10 30945549 30945623 -114643665 - MIR3 SINE MIR -55 153 97 2790 119 47 9 chr10 30945623 30946053 -114643235 + MER83 LTR ERV1 3 448 0 201 279 31 112 chr10 30946053 30946139 -114643149 - MIR3 SINE MIR -111 97 6 1684 283 85 16 chr10 30946478 30946711 -114642577 + L2 LINE L2 1892 2107 -1207 1199 179 92 118 chr10 30946711 30947107 -114642181 + MER4C LTR ERV1 2 386 -79 351 0 0 0 chr10 30947107 30947146 -114642142 + (TG)n Simple_repeat Simple_repeat 2 40 0 1199 179 92 118 chr10 30947146 30947225 -114642063 + MER4C LTR ERV1 386 465 0 1684 283 85 16 chr10 30947225 30947828 -114641460 + L2 LINE L2 2107 2786 -528 532 258 14 83 chr10 30948205 30948422 -114640866 + L2 LINE L2 3112 3313 0 1452 249 75 22 chr10 30948627 30949081 -114640207 + MLT1F LTR MaLR 60 537 -5 270 260 60 30 chr10 30949109 30949209 -114640079 - MIR SINE MIR -108 154 52 192 97 0 0 chr10 30950463 30950494 -114638794 + (GA)n Simple_repeat Simple_repeat 2 32 0 187 360 8 32 chr10 30951594 30951719 -114637569 - MIR3 SINE MIR -21 187 66 272 359 0 0 chr10 30952312 30952418 -114636870 + L2 LINE L2 2266 2371 -943 191 261 0 0 chr10 30952449 30952495 -114636793 + L2 LINE L2 3221 3266 -6 2781 121 91 0 chr10 30952610 30953063 -114636225 + L1PB3 LINE L1 5660 6153 -1 2120 132 0 3 chr10 30953205 30953516 -114635772 - AluSx SINE Alu -2 310 1 1892 157 0 22 chr10 30953516 30953828 -114635460 - AluJb SINE Alu -6 306 1 318 218 129 10 chr10 30953903 30954004 -114635284 - MIR SINE MIR -56 206 94 944 101 0 0 chr10 30954195 30954314 -114634974 + FLAM_C SINE Alu 1 119 -24 465 103 28 28 chr10 30954314 30954421 -114634867 + (TA)n Simple_repeat Simple_repeat 2 108 0 24 53 0 0 chr10 30954439 30954477 -114634811 + AT_rich Low_complexity Low_complexity 1 38 0 304 236 297 0 chr10 30954627 30954775 -114634513 - MIR SINE MIR -54 208 17 1224 205 95 3 chr10 30955052 30955307 -114633981 + AluJo SINE Alu 1 286 -26 360 0 0 0 chr10 30955307 30955347 -114633941 + (CA)n Simple_repeat Simple_repeat 1 40 0 1224 205 95 3 chr10 30955347 30955374 -114633914 + AluJo SINE Alu 286 309 -3 225 0 0 0 chr10 30956115 30956140 -114633148 + (TA)n Simple_repeat Simple_repeat 1 25 0 2118 130 7 0 chr10 30956491 30956784 -114632504 + AluSx SINE Alu 1 295 -17 21 36 0 0 chr10 30956858 30956886 -114632402 + AT_rich Low_complexity Low_complexity 1 28 0 289 186 18 26 chr10 30956971 30957084 -114632204 + (TA)n Simple_repeat Simple_repeat 1 112 0 1814 161 3 0 chr10 30957084 30957370 -114631918 - AluJo SINE Alu -25 287 1 1700 208 25 11 chr10 30957413 30957778 -114631510 + MLT1A2 LTR MaLR 1 370 -4 2699 23 7 3 chr10 30957917 30958225 -114631063 - AluY SINE Alu -2 309 1 202 326 11 22 chr10 30958392 30958481 -114630807 + L2 LINE L2 3185 3272 0 340 323 46 32 chr10 30958501 30958679 -114630609 + MIR SINE MIR 5 184 -77 183 328 123 0 chr10 30960734 30960856 -114628432 - MIR SINE MIR -57 205 69 557 254 40 23 chr10 30961057 30961230 -114628058 - MIR SINE MIR -1 261 86 2298 107 0 7 chr10 30961774 30962084 -114627204 + AluSx SINE Alu 5 312 0 854 231 0 27 chr10 30962870 30963056 -114626232 + MER41D LTR ERV1 1 181 -376 6953 123 128 108 chr10 30963056 30964709 -114624579 - pTR5 LTR ERV1 -7 2431 745 1718 192 51 16 chr10 30964709 30965079 -114624209 + MER41D LTR ERV1 166 548 -9 1176 165 55 42 chr10 30965090 30965182 -114624106 - Tigger3(Golem) DNA MER2_type -2 3027 2938 2410 60 0 0 chr10 30965182 30965500 -114623788 + AluY SINE Alu 1 318 0 1176 165 55 42 chr10 30965500 30965642 -114623646 - Tigger3(Golem) DNA MER2_type -91 2938 2789 4256 53 23 5 chr10 30965653 30966256 -114623032 + Harlequin LTR ERV1 1961 2574 -4322 * 24575 110 11 16 chr10 30966255 30969816 -114619472 + Harlequin LTR ERV1 3352 6896 0 3940 42 38 0 chr10 30969816 30970288 -114619000 + LTR2B LTR ERV1 1 490 0 478 95 0 0 chr10 30970288 30970362 -114618926 + AluSc SINE Alu 236 309 0 672 219 44 15 chr10 30970362 30970499 -114618789 - Tigger3(Golem) DNA MER2_type -2888 141 1 1425 182 0 55 chr10 30970777 30970922 -114618366 + AluJo SINE Alu 1 122 -190 2115 115 21 0 chr10 30970922 30971209 -114618079 + AluSx SINE Alu 1 293 -19 1425 182 0 55 chr10 30971209 30971370 -114617918 + AluJo SINE Alu 122 290 -22 5043 154 26 20 chr10 30972105 30973019 -114616269 - MER49 LTR ERV1 -1 922 3 281 169 17 0 chr10 30973042 30973101 -114616187 + CT-rich Low_complexity Low_complexity 1 60 0 2029 137 7 3 chr10 30973101 30973400 -114615888 - AluSx SINE Alu -4 308 9 646 238 48 12 chr10 30973497 30973665 -114615623 - MER5A DNA MER1_type 0 189 16 823 259 50 27 chr10 30973670 30973967 -114615321 + LTR16A LTR ERVL 119 422 -28 3710 151 3 9 chr10 30974400 30974593 -114614695 - LTR39 LTR ERV1 0 783 591 1954 137 35 0 chr10 30974593 30974877 -114614411 + AluSx SINE Alu 2 295 -17 3710 151 3 9 chr10 30974877 30975265 -114614023 - LTR39 LTR ERV1 -192 591 205 926 70 160 26 chr10 30975266 30975422 -114613866 + L1PA8 LINE L1 5995 6171 -1 * 1803 229 47 16 chr10 30975421 30975930 -114613358 + L1ME3A LINE L1 5634 6162 -8 1569 193 58 20 chr10 30976154 30976502 -114612786 - MLT1A1 LTR MaLR -2 363 3 219 36 0 0 chr10 30976738 30976766 -114612522 + (CAGAGA)n Simple_repeat Simple_repeat 3 30 0 508 255 43 43 chr10 30977212 30977396 -114611892 + MIR3 SINE MIR 4 187 -21 1469 98 229 0 chr10 30977550 30977795 -114611493 + AluSx SINE Alu 1 301 -1 1162 206 31 103 chr10 30977862 30978091 -114611197 - MLT1B LTR MaLR -3 387 200 333 0 0 0 chr10 30978091 30978128 -114611160 + (TG)n Simple_repeat Simple_repeat 2 38 0 1162 206 31 103 chr10 30978128 30978315 -114610973 - MLT1B LTR MaLR -190 200 1 1931 150 0 34 chr10 30978867 30979187 -114610101 + AluJb SINE Alu 1 309 -3 2641 241 88 20 chr10 30979596 30979915 -114609373 - L1ME3A LINE L1 -6 6164 5868 1400 135 8 45 chr10 30979915 30980159 -114609129 + MER46A DNA MER2_type 2 236 0 2641 241 88 20 chr10 30980159 30980653 -114608635 - L1ME3A LINE L1 -302 5868 5295 3267 87 93 10 chr10 30980698 30981190 -114608098 - L1PA11 LINE L1 0 6174 5642 853 150 7 21 chr10 30981216 30981356 -114607932 + AluJo SINE Alu 1 138 -174 1733 113 0 0 chr10 30981376 30981597 -114607691 - AluSg/x SINE Alu -20 292 72 308 215 0 25 chr10 30982163 30982242 -114607046 + L2 LINE L2 3163 3239 -74 300 227 31 10 chr10 30982976 30983073 -114606215 + (TA)n Simple_repeat Simple_repeat 2 100 0 261 0 0 0 chr10 30983075 30983104 -114606184 + (TG)n Simple_repeat Simple_repeat 2 30 0 2028 140 0 25 chr10 30983191 30983506 -114605782 - AluSx SINE Alu -3 309 3 207 0 0 0 chr10 30985423 30985446 -114603842 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 222 37 0 0 chr10 30987009 30987036 -114602252 + (CA)n Simple_repeat Simple_repeat 2 28 0 3652 155 38 41 chr10 30987732 30988461 -114600827 - LTR8A LTR ERV1 0 727 1 2040 173 12 46 chr10 30988811 30989221 -114600067 - MSTD LTR MaLR 0 396 1 413 296 64 54 chr10 30989573 30989776 -114599512 + MIR SINE MIR 34 238 -24 213 174 43 0 chr10 30990097 30990143 -114599145 + (TTAG)n Simple_repeat Simple_repeat 2 49 0 416 203 83 124 chr10 30990997 30991238 -114598050 - L2 LINE L2 -1 3312 3082 23 0 0 0 chr10 30991705 30991728 -114597560 + AT_rich Low_complexity Low_complexity 1 23 0 815 157 0 8 chr10 30991728 30991862 -114597426 - FLAM_C SINE Alu 0 133 1 21 0 0 0 chr10 30992369 30992390 -114596898 + AT_rich Low_complexity Low_complexity 1 21 0 1175 149 0 0 chr10 30992488 30992656 -114596632 - AluSx SINE Alu -11 299 132 13445 54 6 0 chr10 30992656 30995087 -114594201 - L1PA6 LINE L1 -2 6152 3718 5388 157 37 30 chr10 30995088 30996061 -114593227 - L1P LINE L1 -5153 993 14 753 167 71 0 chr10 30996061 30996187 -114593101 - AluSx SINE Alu -177 136 2 365 162 0 14 chr10 30996196 30996270 -114593018 + (TG)n Simple_repeat Simple_repeat 2 74 0 306 179 0 0 chr10 30996270 30996326 -114592962 + L1MC4 LINE L1 6648 6703 -1339 422 91 13 0 chr10 30996462 30996539 -114592749 + (TCTA)n Simple_repeat Simple_repeat 4 81 0 334 347 59 6 chr10 30996636 30996806 -114592482 - MIR3 SINE MIR -5 203 25 2060 145 0 16 chr10 30997149 30997466 -114591822 + AluJb SINE Alu 1 312 0 186 319 83 0 chr10 30998954 30999026 -114590262 - L2 LINE L2 -44 3228 3151 763 132 0 0 chr10 30999161 30999275 -114590013 - L1MB3 LINE L1 -242 5941 5828 1262 202 19 0 chr10 30999292 30999549 -114589739 + L1MD3 LINE L1 7577 7838 -157 313 304 97 23 chr10 31000232 31000467 -114588821 - MIR SINE MIR -10 252 2 375 23 0 0 chr10 31001007 31001051 -114588237 + (CA)n Simple_repeat Simple_repeat 1 44 0 2123 134 3 0 chr10 31001784 31002083 -114587205 - AluSx SINE Alu -12 300 1 675 174 0 33 chr10 31002100 31002221 -114587067 - FLAM_C SINE Alu -17 126 10 183 372 16 33 chr10 31002359 31002480 -114586808 + MIR SINE MIR 26 144 -118 375 262 85 6 chr10 31004639 31004803 -114584485 + MIR SINE MIR 86 262 0 1645 132 12 103 chr10 31005550 31005869 -114583419 - AluJb SINE Alu -22 290 1 206 216 273 0 chr10 31006110 31006198 -114583090 - MIR SINE MIR 0 262 151 376 291 29 34 chr10 31006598 31006660 -114582628 + MER5B DNA MER1_type 1 62 -116 1696 164 51 7 chr10 31006660 31006953 -114582335 + AluJo SINE Alu 1 306 -6 376 291 29 34 chr10 31006953 31007065 -114582223 + MER5B DNA MER1_type 62 174 -4 401 222 8 34 chr10 31007538 31007655 -114581633 - MER5B DNA MER1_type -61 117 4 574 202 0 20 chr10 31007806 31008005 -114581283 + CT-rich Low_complexity Low_complexity 1 194 0 1378 176 42 93 chr10 31008061 31008217 -114581071 - MER96B DNA MER1_type? -5 412 250 1958 142 3 56 chr10 31008217 31008540 -114580748 + AluSq SINE Alu 1 306 -7 1378 176 42 93 chr10 31008540 31008791 -114580497 - MER96B DNA MER1_type? -167 250 26 1933 142 0 0 chr10 31009770 31010045 -114579243 + AluJo SINE Alu 1 275 -37 902 210 125 67 chr10 31010066 31010457 -114578831 + LTR37B LTR ERV1 51 464 -4 1563 145 105 14 chr10 31010630 31010906 -114578382 - AluJo SINE Alu -11 301 1 543 251 41 12 chr10 31011153 31011324 -114577964 - MER5B DNA MER1_type 0 178 3 23 0 0 0 chr10 31011684 31011707 -114577581 + AT_rich Low_complexity Low_complexity 1 23 0 231 173 0 0 chr10 31011808 31011860 -114577428 + C-rich Low_complexity Low_complexity 1 52 0 956 174 0 18 chr10 31012761 31012928 -114576360 - FRAM SINE Alu -15 161 1 362 333 104 9 chr10 31012930 31013161 -114576127 - MIR SINE MIR -2 260 8 385 293 79 45 chr10 31013504 31013705 -114575583 + L1ME4a LINE L1 5736 5950 -171 1771 174 3 19 chr10 31013705 31014021 -114575267 + AluJo SINE Alu 1 311 -1 385 293 79 45 chr10 31014021 31014085 -114575203 + L1ME4a LINE L1 5950 6010 -111 1945 138 17 3 chr10 31014859 31015149 -114574139 - AluJo SINE Alu -15 297 4 2088 103 3 23 chr10 31015160 31015495 -114573793 - AluSx SINE Alu 0 312 1 204 346 68 0 chr10 31015858 31015991 -114573297 + MIR SINE MIR 65 206 -56 1566 138 57 8 chr10 31016100 31016347 -114572941 - AluJo SINE Alu -23 289 31 285 269 67 42 chr10 31016351 31016470 -114572818 - L2 LINE L2 -11 3302 3181 1594 91 59 18 chr10 31018224 31018445 -114570843 + MER30 DNA MER1_type 1 230 0 799 185 0 0 chr10 31018585 31018704 -114570584 - FLAM_C SINE Alu -23 120 2 1886 108 73 0 chr10 31018766 31019025 -114570263 - AluSx SINE Alu -32 280 3 1881 160 3 0 chr10 31020927 31021220 -114568068 + AluJo SINE Alu 1 294 -18 2244 128 0 0 chr10 31021364 31021676 -114567612 - AluSx SINE Alu 0 312 1 1762 158 17 20 chr10 31021744 31022041 -114567247 - AluJb SINE Alu -16 296 1 258 216 0 0 chr10 31022108 31022159 -114567129 - MER117 DNA MER1_type -78 119 69 590 285 144 30 chr10 31022207 31022611 -114566677 - LTR16A LTR ERVL 0 450 1 230 0 0 32 chr10 31022677 31022708 -114566580 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 989 299 29 8 chr10 31022738 31023113 -114566175 + L1ME4a LINE L1 5495 5877 -244 273 170 0 0 chr10 31023158 31023205 -114566083 - MER3 DNA MER1_type -9 200 154 2384 176 54 45 chr10 31023211 31023569 -114565719 + L1MA9 LINE L1 5752 6105 -207 1891 149 4 0 chr10 31023569 31023844 -114565444 + AluSx SINE Alu 1 276 -36 2384 176 54 45 chr10 31023844 31023892 -114565396 + L1MA9 LINE L1 6105 6151 -161 321 26 0 0 chr10 31023892 31023930 -114565358 + (CA)n Simple_repeat Simple_repeat 1 38 0 2384 176 54 45 chr10 31023930 31024078 -114565210 + L1MA9 LINE L1 6151 6312 0 700 211 0 78 chr10 31024091 31024143 -114565145 - MER3 DNA MER1_type 4 166 112 2865 10 0 0 chr10 31024143 31024454 -114564834 - AluYa5 SINE Alu 0 311 1 700 211 0 78 chr10 31024454 31024581 -114564707 - MER3 DNA MER1_type -50 112 1 209 276 48 9 chr10 31025160 31025265 -114564023 - MIR SINE MIR -14 248 140 26 50 0 0 chr10 31025393 31025433 -114563855 + AT_rich Low_complexity Low_complexity 1 40 0 251 209 30 15 chr10 31026490 31026557 -114562731 + (TATG)n Simple_repeat Simple_repeat 3 70 0 974 111 0 22 chr10 31026662 31026797 -114562491 + FLAM_C SINE Alu 1 132 -1 2072 294 110 24 chr10 31027227 31027914 -114561374 + L1MEc LINE L1 49 676 -5720 4185 130 7 0 chr10 31027914 31028512 -114560776 + LTR43 LTR ERV1 1 602 0 2072 294 110 24 chr10 31028512 31029224 -114560064 + L1MEc LINE L1 676 1568 -4828 1786 146 24 28 chr10 31029232 31029337 -114559951 + AluJb SINE Alu 1 105 -207 2587 122 5 19 chr10 31029337 31029706 -114559582 - THE1B LTR MaLR 0 364 1 1786 146 24 28 chr10 31029706 31029887 -114559401 + AluJb SINE Alu 105 286 -26 2202 215 44 47 chr10 31029902 31030601 -114558687 + L1MEc LINE L1 1577 2273 -4123 907 207 23 0 chr10 31030634 31030808 -114558480 + MER58A DNA MER1_type 43 220 -4 1820 258 60 26 chr10 31030809 31031406 -114557882 + L1MEc LINE L1 2225 2847 -3368 3923 121 4 9 chr10 31031406 31031936 -114557352 + MER1A DNA MER1_type 1 527 0 1820 258 60 26 chr10 31031936 31031992 -114557296 + L1MEc LINE L1 2847 2900 -3315 1592 257 20 20 chr10 31031993 31032157 -114557131 - HAL1 LINE L1 -674 1833 1670 1007 332 45 22 chr10 31032157 31032666 -114556622 + LTR33 LTR ERVL 1 521 0 1592 257 20 20 chr10 31032666 31032957 -114556331 - HAL1 LINE L1 -836 1671 1378 543 195 0 0 chr10 31032966 31033053 -114556235 - Tigger7 DNA MER2_type -11 2480 2394 1464 230 0 4 chr10 31033059 31033320 -114555968 - Tigger7 DNA MER2_type -2227 260 1 2667 261 95 51 chr10 31033338 31034356 -114554932 - HAL1 LINE L1 -1165 1342 370 189 0 0 0 chr10 31034356 31034377 -114554911 + (TTG)n Simple_repeat Simple_repeat 1 21 0 2667 261 95 51 chr10 31034377 31034597 -114554691 - HAL1 LINE L1 -2137 370 44 2203 230 68 30 chr10 31034597 31035197 -114554091 - MLT1E2 LTR MaLR -1 625 3 2667 261 95 51 chr10 31035197 31035241 -114554047 - HAL1 LINE L1 -2463 44 3 534 325 45 29 chr10 31035273 31035581 -114553707 + L3 LINE CR1 1136 1448 -129 1508 180 71 19 chr10 31035664 31035986 -114553302 + MER44D DNA MER2_type 1 609 0 644 198 33 0 chr10 31036087 31036208 -114553080 - L2 LINE L2 -1 3312 3188 201 376 58 31 chr10 31036495 31036721 -114552567 + L2 LINE L2 2822 3053 -219 2314 113 0 3 chr10 31036721 31037032 -114552256 - AluSx SINE Alu -2 310 1 1387 153 57 66 chr10 31037299 31037646 -114551642 + AluJo SINE Alu 13 356 0 2849 138 5 25 chr10 31039239 31039680 -114549608 + Tigger2a DNA MER2_type 3 434 0 2124 132 0 0 chr10 31039861 31040164 -114549124 - AluSg SINE Alu -7 303 1 855 237 47 0 chr10 31040750 31040940 -114548348 + MER58A DNA MER1_type 23 221 -3 1914 166 0 6 chr10 31041004 31041317 -114547971 + AluJo SINE Alu 1 311 -1 1145 243 122 8 chr10 31041908 31042377 -114546911 - Charlie7 DNA MER1_type -5 2607 2086 729 269 228 8 chr10 31042377 31042771 -114546517 - L1MC/D LINE L1 -1990 5818 5338 7436 214 94 57 chr10 31042890 31045625 -114543663 + L1MC3 LINE L1 4283 7240 -545 408 229 36 0 chr10 31045625 31045708 -114543580 + MLT1F1 LTR MaLR 45 130 -437 7436 214 94 57 chr10 31045708 31046257 -114543031 + L1MC3 LINE L1 7240 7767 -18 784 246 87 4 chr10 31046258 31046510 -114542778 - Charlie7 DNA MER1_type -898 1714 1442 1068 190 41 37 chr10 31046876 31047145 -114542143 - L1MB5 LINE L1 -1 6173 5904 507 263 62 39 chr10 31047151 31047330 -114541958 + MER5A DNA MER1_type 1 183 -6 1186 203 60 56 chr10 31048533 31048799 -114540489 + AluJo SINE Alu 1 267 -45 21 36 0 0 chr10 31048820 31048848 -114540440 + AT_rich Low_complexity Low_complexity 1 28 0 233 259 17 0 chr10 31049010 31049068 -114540220 + MIR SINE MIR 203 261 -1 225 180 0 0 chr10 31049743 31049793 -114539495 + (TG)n Simple_repeat Simple_repeat 1 50 0 201 224 20 41 chr10 31050583 31050632 -114538656 - MIR3 SINE MIR -51 157 110 2508 149 45 12 chr10 31051005 31051231 -114538057 - Tigger2 DNA MER2_type 0 2718 2501 1942 156 13 3 chr10 31051231 31051538 -114537750 + AluJb SINE Alu 1 310 -2 2508 149 45 12 chr10 31051538 31051734 -114537554 - Tigger2 DNA MER2_type -217 2501 2282 359 209 0 0 chr10 31051736 31051803 -114537485 - Tigger2 DNA MER2_type -2651 67 1 4124 98 11 21 chr10 31054244 31054429 -114534859 + MER41A LTR ERV1 1 186 -368 2383 96 0 3 chr10 31054429 31054742 -114534546 + AluSx SINE Alu 1 312 0 4124 98 11 21 chr10 31054742 31055116 -114534172 + MER41A LTR ERV1 186 554 0 260 363 14 14 chr10 31055257 31055403 -114533885 + MER5A DNA MER1_type 7 152 -37 2269 65 0 21 chr10 31055530 31055847 -114533441 - AluY SINE Alu 0 311 1 2094 132 3 0 chr10 31056012 31056307 -114532981 + AluSx SINE Alu 1 296 -16 28 0 0 0 chr10 31056408 31056436 -114532852 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr10 31056676 31056699 -114532589 + AT_rich Low_complexity Low_complexity 1 23 0 1136 197 94 23 chr10 31056885 31057351 -114531937 + MLT1E LTR MaLR 1 593 0 450 275 60 71 chr10 31057373 31057819 -114531469 - L1MEd LINE L1 -1032 1458 924 213 39 0 0 chr10 31057960 31057986 -114531302 + (TG)n Simple_repeat Simple_repeat 1 26 0 1931 173 76 6 chr10 31058619 31058960 -114530328 - MLT1A1 LTR MaLR 0 365 1 490 339 39 26 chr10 31059278 31059508 -114529780 + MIR SINE MIR 30 262 0 1679 245 60 23 chr10 31059609 31060090 -114529198 + MLT2B1 LTR ERVL 3 501 -19 300 50 25 0 chr10 31060112 31060152 -114529136 + MLT2B1 LTR ERVL 469 509 -6 2388 80 0 3 chr10 31061933 31062235 -114527053 - AluSg SINE Alu -9 301 1 1889 163 3 0 chr10 31062322 31062616 -114526672 + AluJo SINE Alu 1 295 -17 210 91 0 0 chr10 31063752 31063785 -114525503 + (CA)n Simple_repeat Simple_repeat 2 34 0 2227 92 3 3 chr10 31064418 31064701 -114524587 - AluSp SINE Alu -30 283 1 2250 108 0 0 chr10 31064701 31064997 -114524291 - AluSg1 SINE Alu -13 296 1 2684 55 3 0 chr10 31065539 31065869 -114523419 - L1PA13 LINE L1 -18 6145 5815 1274 109 0 0 chr10 31065874 31066039 -114523249 - AluSg/x SINE Alu -21 291 127 2300 112 0 0 chr10 31066041 31066353 -114522935 - AluSx SINE Alu 0 312 1 2242 83 13 0 chr10 31066355 31066656 -114522632 - L1PA12 LINE L1 -340 5828 5524 203 336 71 9 chr10 31066893 31067006 -114522282 + L2 LINE L2 3148 3267 -5 547 146 22 29 chr10 31067337 31067474 -114521814 + CT-rich Low_complexity Low_complexity 4 139 0 1029 104 0 33 chr10 31067560 31067743 -114521545 + (TTTC)n Simple_repeat Simple_repeat 1 177 0 1708 162 59 4 chr10 31068761 31069033 -114520255 + AluJo SINE Alu 1 287 -25 1765 146 79 0 chr10 31069637 31069904 -114519384 - AluJo SINE Alu -24 288 1 2332 103 0 0 chr10 31069921 31070223 -114519065 + AluSg SINE Alu 1 302 -8 256 343 0 0 chr10 31070229 31070302 -114518986 - L2 LINE L2 -32 3240 3168 597 237 51 32 chr10 31070321 31070574 -114518714 - L1ME4a LINE L1 -210 5911 5654 319 252 59 115 chr10 31071503 31071635 -114517653 - L1ME4a LINE L1 -568 5553 5415 1613 190 3 14 chr10 31071635 31071919 -114517369 - AluJo SINE Alu -30 282 2 319 252 59 115 chr10 31071919 31072035 -114517253 - L1ME4a LINE L1 -706 5415 5294 230 0 33 0 chr10 31072035 31072065 -114517223 + (TC)n Simple_repeat Simple_repeat 2 32 0 * 396 0 0 0 chr10 31072064 31072108 -114517180 + (TG)n Simple_repeat Simple_repeat 1 44 0 319 252 59 115 chr10 31072065 31072128 -114517160 - L1ME4a LINE L1 -826 5295 5299 349 318 105 14 chr10 31072225 31072521 -114516767 - L1ME4a LINE L1 -1083 5063 4741 182 37 37 0 chr10 31074160 31074187 -114515101 + (CAAAAA)n Simple_repeat Simple_repeat 1 28 0 718 154 39 23 chr10 31075564 31075694 -114513594 - FLAM_C SINE Alu -10 133 2 212 196 0 22 chr10 31076260 31076306 -114512982 + CT-rich Low_complexity Low_complexity 3 47 0 751 161 9 34 chr10 31076360 31076590 -114512698 + CT-rich Low_complexity Low_complexity 1 224 0 1675 209 0 0 chr10 31078081 31078363 -114510925 - AluJo SINE Alu -30 282 1 196 229 29 29 chr10 31079101 31079171 -114510117 - L3 LINE CR1 -3 1574 1505 2425 140 56 12 chr10 31080654 31081062 -114508226 - MSTB LTR MaLR 0 426 1 21 0 0 0 chr10 31081758 31081779 -114507509 + AT_rich Low_complexity Low_complexity 1 21 0 2284 100 0 0 chr10 31081853 31082144 -114507144 - AluSx SINE Alu -21 291 1 1475 107 0 15 chr10 31082726 31082932 -114506356 - AluSg/x SINE Alu -11 299 97 790 245 169 8 chr10 31083616 31083925 -114505363 + L1ME2 LINE L1 5681 6052 -112 289 97 0 0 chr10 31083929 31083980 -114505308 + FLAM_A SINE Alu 84 119 -14 245 178 46 11 chr10 31083982 31084156 -114505132 + (TA)n Simple_repeat Simple_repeat 1 180 0 1489 234 3 3 chr10 31084176 31084462 -114504826 - AluJo SINE Alu -26 286 1 232 231 205 0 chr10 31084462 31084540 -114504748 + L1ME3 LINE L1 6039 6132 -30 282 238 42 7 chr10 31084544 31084716 -114504572 + (TA)n Simple_repeat Simple_repeat 1 178 0 190 286 0 0 chr10 31084749 31084798 -114504490 - MIR SINE MIR -7 255 207 180 0 0 0 chr10 31087133 31087153 -114502135 + (T)n Simple_repeat Simple_repeat 1 20 0 1035 159 13 94 chr10 31087618 31087851 -114501437 - MER20 DNA MER1_type -2 217 4 213 200 0 0 chr10 31088346 31088391 -114500897 + G-rich Low_complexity Low_complexity 1 45 0 251 91 0 0 chr10 31088740 31088773 -114500515 + (TTCCC)n Simple_repeat Simple_repeat 4 36 0 485 167 56 19 chr10 31088773 31088935 -114500353 + CT-rich Low_complexity Low_complexity 1 168 0 479 189 0 21 chr10 31088935 31089030 -114500258 - AluJ/FRAM SINE Alu -3 309 217 683 171 8 0 chr10 31089059 31089176 -114500112 - FLAM_C SINE Alu -15 118 1 323 227 21 31 chr10 31090894 31090991 -114498297 + MIR SINE MIR 6 101 -161 1026 165 24 0 chr10 31091005 31091169 -114498119 - FRAM SINE Alu -16 160 1 188 340 106 0 chr10 31091181 31091275 -114498013 + MIR SINE MIR 144 247 -15 564 148 0 137 chr10 31092160 31092343 -114496945 - Charlie5 DNA MER1_type -84 2528 2371 2331 98 0 9 chr10 31093652 31093967 -114495321 + AluSq SINE Alu 1 312 -1 27 0 0 0 chr10 31094073 31094100 -114495188 + AT_rich Low_complexity Low_complexity 1 27 0 327 298 10 10 chr10 31094504 31094625 -114494663 + MIR SINE MIR 32 153 -55 320 348 130 0 chr10 31094625 31094855 -114494433 + MIR SINE MIR 3 262 0 2118 122 10 26 chr10 31094870 31095182 -114494106 - AluSx SINE Alu -5 307 1 236 75 0 25 chr10 31095566 31095606 -114493682 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 2216 118 7 0 chr10 31095949 31096246 -114493042 - AluSg SINE Alu -11 299 1 2206 124 0 9 chr10 31096451 31096766 -114492522 - AluSx SINE Alu 0 312 1 378 236 231 36 chr10 31097252 31097447 -114491841 - L1MC/D LINE L1 -497 5624 5521 1639 175 0 22 chr10 31097964 31098278 -114491010 - AluJo SINE Alu 0 312 6 497 213 0 0 chr10 31098312 31098392 -114490896 - AluJ/FLAM SINE Alu -230 82 3 262 271 0 0 chr10 31099346 31099405 -114489883 - L2 LINE L2 -9 3263 3205 288 335 150 21 chr10 31099947 31100281 -114489007 - L2 LINE L2 -1001 2313 1937 180 0 0 0 chr10 31100498 31100518 -114488770 + (TTTTTA)n Simple_repeat Simple_repeat 2 21 0 940 114 0 66 chr10 31102671 31102838 -114486450 + AluJb SINE Alu 154 309 -3 180 0 0 0 chr10 31102959 31102979 -114486309 + (TAAAAA)n Simple_repeat Simple_repeat 2 21 0 2050 141 79 50 chr10 31103141 31103560 -114485728 + MSTB1 LTR MaLR 2 432 0 319 308 22 75 chr10 31105461 31105688 -114483600 - MIR SINE MIR -25 237 23 1748 199 0 6 chr10 31107468 31107780 -114481508 - AluJb SINE Alu -2 310 1 206 310 26 9 chr10 31108261 31108377 -114480911 - L2 LINE L2 -638 2676 2559 677 219 71 120 chr10 31108662 31108987 -114480301 + L1MD2 LINE L1 5869 6177 -182 1206 164 220 12 chr10 31108999 31109249 -114480039 - AluJb SINE Alu 0 302 1 1298 169 12 0 chr10 31109609 31109851 -114479437 + L1MB4 LINE L1 5935 6179 -1 2352 135 112 0 chr10 31110418 31110803 -114478485 - MSTA LTR MaLR 0 428 1 648 253 66 48 chr10 31111393 31111666 -114477622 - L1ME4a LINE L1 -242 5879 5602 210 255 184 31 chr10 31112902 31113000 -114476288 + L2 LINE L2 3190 3302 -11 838 288 9 4 chr10 31113055 31113288 -114476000 - MIR SINE MIR 0 262 29 21 0 0 0 chr10 31113533 31113554 -114475734 + AT_rich Low_complexity Low_complexity 1 21 0 201 318 0 0 chr10 31113578 31113641 -114475647 + (CATATA)n Simple_repeat Simple_repeat 1 63 0 1295 271 61 76 chr10 31113641 31113949 -114475339 - L1MC4 LINE L1 -128 7914 7603 1536 101 128 130 chr10 31113949 31114325 -114474963 - THE1C LTR MaLR 0 375 1 1295 271 61 76 chr10 31114325 31114754 -114474534 - L1MC4 LINE L1 -439 7603 7188 948 133 95 0 chr10 31115377 31115535 -114473753 + FRAM SINE Alu 1 172 -4 2284 86 0 7 chr10 31116725 31117026 -114472262 - AluY SINE Alu -12 299 1 227 277 102 106 chr10 31117296 31117531 -114471757 - L2 LINE L2 -36 3236 3003 1595 179 69 135 chr10 31117545 31118080 -114471208 - MLT2B1 LTR ERVL 0 520 21 186 143 0 0 chr10 31118172 31118207 -114471081 + (CA)n Simple_repeat Simple_repeat 2 36 0 674 280 75 10 chr10 31118855 31119055 -114470233 - MIR SINE MIR -4 258 46 408 156 0 0 chr10 31119063 31119127 -114470161 + AluS SINE Alu 229 292 -18 1395 232 14 0 chr10 31119151 31119440 -114469848 + AluJb SINE Alu 1 293 -19 242 279 59 0 chr10 31119473 31119541 -114469747 + MIR SINE MIR 34 105 -157 24 0 0 0 chr10 31119927 31119951 -114469337 + AT_rich Low_complexity Low_complexity 1 24 0 360 289 12 52 chr10 31120479 31120568 -114468720 - MIR SINE MIR -17 245 165 2459 231 72 4 chr10 31120568 31121082 -114468206 - MLT1H LTR MaLR 0 549 1 360 289 12 52 chr10 31121082 31121165 -114468123 - MIR SINE MIR -97 165 80 338 165 113 30 chr10 31121854 31121987 -114467301 + L1ME4a LINE L1 5976 6119 -2 185 259 74 0 chr10 31122501 31122555 -114466733 - L3 LINE CR1 -138 1439 1382 327 349 41 30 chr10 31122669 31122838 -114466450 + L2 LINE L2 3102 3272 0 213 39 0 0 chr10 31123386 31123412 -114465876 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1835 148 21 0 chr10 31123416 31123699 -114465589 - AluJo SINE Alu -23 289 1 655 305 162 11 chr10 31124138 31124509 -114464779 - L3 LINE CR1 -72 1505 1079 1409 195 3 78 chr10 31125127 31125461 -114463827 + AluJo SINE Alu 1 309 -3 217 331 73 53 chr10 31126750 31126901 -114462387 + MIR3 SINE MIR 32 185 -23 379 169 0 0 chr10 31127017 31127076 -114462212 + polypyrimidine Low_complexity Low_complexity 2 60 0 666 209 6 16 chr10 31127077 31127259 -114462029 + CT-rich Low_complexity Low_complexity 1 180 0 1437 213 30 16 chr10 31127262 31127567 -114461721 - AluJo SINE Alu -3 309 1 228 205 31 58 chr10 31128647 31128729 -114460559 - MIR SINE MIR -66 142 61 679 134 0 9 chr10 31129491 31129603 -114459685 + FLAM_C SINE Alu 32 142 -1 236 134 60 90 chr10 31129653 31129720 -114459568 + L1MC4 LINE L1 7923 7987 -55 449 202 64 0 chr10 31129728 31129822 -114459466 - MLT1B LTR MaLR 0 390 291 823 181 7 40 chr10 31129966 31130115 -114459173 + FRAM SINE Alu 1 144 -32 1933 162 27 15 chr10 31131395 31131728 -114457560 - MER44D DNA MER2_type -1 608 2 1225 236 18 60 chr10 31131735 31131857 -114457431 - MLT1A2 LTR MaLR -2 372 246 1881 141 0 72 chr10 31131857 31132191 -114457097 - AluJo SINE Alu -2 310 1 1225 236 18 60 chr10 31132191 31132453 -114456835 - MLT1A2 LTR MaLR -128 246 4 234 186 47 81 chr10 31133315 31133401 -114455887 - MIR SINE MIR -52 210 128 423 346 6 19 chr10 31134338 31134494 -114454794 + MIR3 SINE MIR 52 205 -3 2007 221 10 25 chr10 31135266 31135668 -114453620 - MSTD LTR MaLR 0 396 1 182 300 0 62 chr10 31135779 31135859 -114453429 + MIR SINE MIR 80 154 -108 801 180 4 132 chr10 31136018 31136246 -114453042 + MER20 DNA MER1_type 2 200 -19 2399 84 0 13 chr10 31136335 31136644 -114452644 - AluSg SINE Alu -5 305 1 1415 158 57 4 chr10 31136659 31136905 -114452383 - AluJo SINE Alu -30 282 24 904 231 160 12 chr10 31137082 31137573 -114451715 + LTR50 LTR ERVL 52 731 -64 1590 205 3 3 chr10 31137573 31137861 -114451427 - AluJo SINE Alu -24 288 1 904 231 160 12 chr10 31137861 31137938 -114451350 + LTR50 LTR ERVL 731 795 0 228 167 0 0 chr10 31138392 31138440 -114450848 + (TG)n Simple_repeat Simple_repeat 1 48 0 27 29 0 0 chr10 31138622 31138656 -114450632 + AT_rich Low_complexity Low_complexity 1 34 0 219 170 0 0 chr10 31139652 31139699 -114449589 + (TG)n Simple_repeat Simple_repeat 1 47 0 578 174 35 0 chr10 31139798 31139913 -114449375 + L1M4 LINE L1 4145 4263 -1883 1072 208 51 55 chr10 31140404 31140623 -114448665 + MLT1A1 LTR MaLR 1 219 -146 1482 188 0 8 chr10 31140623 31140878 -114448410 + AluJo SINE Alu 35 287 -25 215 31 31 0 chr10 31140883 31140915 -114448373 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 1072 208 51 55 chr10 31140915 31141122 -114448166 + MLT1A1 LTR MaLR 223 365 0 22 35 0 0 chr10 31141739 31141768 -114447520 + AT_rich Low_complexity Low_complexity 1 29 0 2334 153 9 3 chr10 31141799 31142145 -114447143 - MER7A DNA MER2_type 0 346 1 193 343 157 10 chr10 31142166 31142268 -114447020 - MIR SINE MIR -76 132 16 667 254 30 12 chr10 31142755 31142924 -114446364 - MER5B DNA MER1_type -4 174 3 900 210 11 6 chr10 31142938 31143114 -114446174 - MER5B DNA MER1_type -1 177 1 307 299 287 0 chr10 31143442 31143609 -114445679 - MIR SINE MIR 0 262 48 360 58 29 43 chr10 31145044 31145113 -114444175 + (TTTC)n Simple_repeat Simple_repeat 2 69 0 2899 130 7 31 chr10 31145225 31145670 -114443618 + MER57B LTR ERV1 1 434 0 384 40 0 0 chr10 31146423 31146473 -114442815 + (CA)n Simple_repeat Simple_repeat 2 51 0 34 42 0 0 chr10 31146661 31146709 -114442579 + AT_rich Low_complexity Low_complexity 1 48 0 713 272 58 73 chr10 31146809 31147273 -114442015 + LTR16A LTR ERVL 1 450 0 3861 153 14 16 chr10 31147450 31148085 -114441203 + L1PA16 LINE L1 5520 6153 -13 32 0 0 0 chr10 31148672 31148704 -114440584 + AT_rich Low_complexity Low_complexity 1 32 0 1743 177 3 25 chr10 31149326 31149642 -114439646 + AluJo SINE Alu 1 309 -3 224 254 51 0 chr10 31150051 31150110 -114439178 + L2 LINE L2 3211 3272 0 562 167 0 67 chr10 31150138 31150258 -114439030 + FLAM_C SINE Alu 2 113 -30 3844 125 12 4 chr10 31151265 31151827 -114437461 - L1PB3 LINE L1 -3 6151 5585 455 340 34 10 chr10 31151832 31152038 -114437250 - MIR SINE MIR -50 212 2 439 322 20 7 chr10 31153497 31153643 -114435645 - MIR SINE MIR -97 165 18 26 50 0 0 chr10 31153668 31153708 -114435580 + AT_rich Low_complexity Low_complexity 1 40 0 3918 88 27 8 chr10 31153724 31154250 -114435038 - L1PA10 LINE L1 -1 6167 5632 277 299 35 0 chr10 31154509 31154596 -114434692 + MIR SINE MIR 67 156 -106 320 125 4 2 chr10 31154596 31154852 -114434436 + AluSx SINE Alu 1 299 -2 205 364 45 0 chr10 31155382 31155470 -114433818 + MIR SINE MIR 81 172 -90 2264 103 3 0 chr10 31155526 31155826 -114433462 + AluSx SINE Alu 1 301 -11 248 267 221 0 chr10 31155879 31155965 -114433323 + L2 LINE L2 3166 3270 -2 1854 121 452 11 chr10 31156085 31156525 -114432763 + MER51A LTR ERV1 1 634 0 596 135 31 0 chr10 31156666 31156762 -114432526 - L1MD1 LINE L1 0 6242 6144 1718 196 3 3 chr10 31156764 31157086 -114432202 - L1MD1 LINE L1 -267 5975 5654 267 217 116 14 chr10 31157086 31157155 -114432133 + MLT1J1 LTR MaLR 347 422 -24 539 153 73 56 chr10 31157287 31157439 -114431849 - MIR SINE MIR -2 260 103 1695 151 15 11 chr10 31157476 31157747 -114431541 + THE1B LTR MaLR 93 364 0 300 194 21 21 chr10 31157747 31157840 -114431448 - L1MCc LINE L1 -5058 2064 1972 6607 131 70 37 chr10 31157846 31158565 -114430723 + Tigger3b DNA MER2_type 2 777 -2251 4498 112 41 2 chr10 31158565 31159181 -114430107 + LTR9B LTR ERV1 5 644 0 6607 131 70 37 chr10 31159181 31159651 -114429637 + Tigger3b DNA MER2_type 777 1230 -1 2477 75 0 7 chr10 31159672 31159980 -114429308 + AluY SINE Alu 1 306 -5 273 266 0 0 chr10 31160018 31160082 -114429206 + CT-rich Low_complexity Low_complexity 1 64 0 758 261 70 40 chr10 31160088 31160360 -114428928 - L1M4 LINE L1 -2076 4070 3791 2049 263 97 13 chr10 31160360 31160907 -114428381 + MLT1E LTR MaLR 1 593 0 1135 272 262 15 chr10 31160914 31161392 -114427896 + MLT1E-int LTR MaLR 9 627 -744 643 283 21 16 chr10 31161594 31161785 -114427503 + MLT1E-int LTR MaLR 692 883 -488 935 235 77 98 chr10 31161896 31162313 -114426975 + MLT1E-int LTR MaLR 964 1371 0 1041 278 35 82 chr10 31162321 31162530 -114426758 + MLT1E LTR MaLR 37 219 -374 2271 136 0 0 chr10 31162530 31162840 -114426448 + AluSx SINE Alu 1 310 -2 1041 278 35 82 chr10 31162840 31163033 -114426255 + MLT1E LTR MaLR 219 420 -173 821 201 23 23 chr10 31163043 31163217 -114426071 + MLT1E LTR MaLR 1 174 -331 3183 271 73 24 chr10 31163220 31164635 -114424653 - L1MEc LINE L1 -4317 2079 562 1536 204 73 14 chr10 31164635 31165003 -114424285 + MLT1B LTR MaLR 1 390 0 3183 271 73 24 chr10 31165003 31165555 -114423733 - L1MEc LINE L1 -5834 562 39 711 271 83 22 chr10 31165557 31165964 -114423324 - L1MCc LINE L1 -4887 1536 1129 371 344 13 7 chr10 31166368 31166519 -114422769 - L1MCc LINE L1 -6009 414 263 200 203 0 54 chr10 31167174 31167248 -114422040 + T-rich Low_complexity Low_complexity 2 71 0 853 134 0 15 chr10 31167406 31167540 -114421748 + AluSg/x SINE Alu 178 309 -1 281 330 106 37 chr10 31167584 31167802 -114421486 - MIR SINE MIR -7 255 23 3907 102 86 3 chr10 31168040 31168635 -114420653 + LTR9B LTR ERV1 1 644 0 655 207 67 16 chr10 31168739 31168932 -114420356 + L1ME2 LINE L1 5953 6155 -9 246 81 0 0 chr10 31168936 31168973 -114420315 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 1495 196 7 18 chr10 31168976 31169252 -114420036 - AluJo SINE Alu -30 282 10 387 0 0 0 chr10 31169272 31169315 -114419973 + (CA)n Simple_repeat Simple_repeat 2 44 0 2244 105 0 0 chr10 31169323 31169609 -114419679 - AluSc SINE Alu -23 286 1 445 159 30 50 chr10 31170830 31170968 -114418320 + MER51A LTR ERV1 1 136 -241 286 105 0 53 chr10 31170982 31171039 -114418249 + MER51B LTR ERV1 109 162 -215 * 1723 121 40 62 chr10 31171031 31171129 -114418159 + MER51B LTR ERV1 63 162 -215 2103 121 7 0 chr10 31171129 31171426 -114417862 + AluSx SINE Alu 1 299 -13 1723 121 40 62 chr10 31171426 31171649 -114417639 + MER51B LTR ERV1 162 377 0 261 83 0 0 chr10 31171897 31171933 -114417355 + (T)n Simple_repeat Simple_repeat 1 36 0 1892 137 0 34 chr10 31174176 31174469 -114414819 + AluSq SINE Alu 1 283 -30 2150 98 3 0 chr10 31175663 31175950 -114413338 + AluSq SINE Alu 23 310 -3 493 256 83 24 chr10 31176069 31176237 -114413051 + MIR SINE MIR 11 188 -74 374 240 10 30 chr10 31176661 31176761 -114412527 + MER5A DNA MER1_type 9 106 -83 1527 198 35 35 chr10 31176794 31177162 -114412126 + MLT1A2 LTR MaLR 7 374 0 387 74 0 0 chr10 31177192 31177246 -114412042 - MADE1 DNA Mariner -26 54 1 383 186 93 0 chr10 31178724 31178821 -114410467 + MER5A DNA MER1_type 4 109 -80 455 117 0 0 chr10 31178848 31178908 -114410380 + AluJ/FRAM SINE Alu 226 285 -27 272 305 54 121 chr10 31179871 31180094 -114409194 + MIR SINE MIR 30 237 -25 2151 130 0 0 chr10 31181208 31181508 -114407780 + AluSx SINE Alu 1 300 -12 520 319 51 54 chr10 31182222 31182382 -114406906 + L3 LINE CR1 431 591 -986 2184 119 0 7 chr10 31182382 31182677 -114406611 - AluSq SINE Alu -18 295 3 520 319 51 54 chr10 31182677 31182830 -114406458 + L3 LINE CR1 591 743 -834 688 236 31 12 chr10 31183458 31183619 -114405669 + FRAM SINE Alu 3 166 0 247 243 54 0 chr10 31183727 31183801 -114405487 + L2 LINE L2 2897 2974 -298 1498 184 4 23 chr10 31184168 31184429 -114404859 + AluJo SINE Alu 1 256 -56 213 319 59 50 chr10 31184735 31184854 -114404434 + MIR3 SINE MIR 58 177 -31 2453 80 18 108 chr10 31185026 31185426 -114403862 - THE1B LTR MaLR 0 364 1 2467 67 0 3 chr10 31185694 31185992 -114403296 + AluY SINE Alu 1 297 -14 431 280 37 37 chr10 31186397 31186595 -114402693 + MIR SINE MIR 32 231 -31 328 257 124 45 chr10 31186752 31187130 -114402158 - LTR33 LTR ERVL -19 502 24 3511 127 79 99 chr10 31187355 31188156 -114401132 - LTR1 LTR ERV1 0 785 1 1947 129 0 4 chr10 31189673 31189944 -114399344 + AluSx SINE Alu 12 281 -31 22 0 0 0 chr10 31191399 31191421 -114397867 + AT_rich Low_complexity Low_complexity 1 22 0 1754 184 0 0 chr10 31191606 31191914 -114397374 + AluJo SINE Alu 1 308 0 23 33 0 0 chr10 31193034 31193064 -114396224 + AT_rich Low_complexity Low_complexity 1 30 0 217 259 138 16 chr10 31193129 31193223 -114396065 + MIR SINE MIR 98 200 -62 1028 224 105 119 chr10 31193483 31193904 -114395384 + MLT1G LTR MaLR 12 424 -166 1859 132 0 3 chr10 31193904 31194200 -114395088 + L1MA6 LINE L1 6006 6300 0 1028 224 105 119 chr10 31194200 31194357 -114394931 + MLT1G LTR MaLR 424 582 -8 261 282 0 0 chr10 31194813 31194884 -114394404 + MIR SINE MIR 172 242 -20 1868 149 7 19 chr10 31195674 31195982 -114393306 - AluJo SINE Alu -8 304 1 388 250 0 0 chr10 31196409 31196501 -114392787 + MIR SINE MIR 166 257 -5 193 318 36 45 chr10 31196507 31196617 -114392671 - MIR SINE MIR -95 167 59 2043 130 0 3 chr10 31196758 31197071 -114392217 + AluSx SINE Alu 1 312 0 240 163 0 0 chr10 31197320 31197363 -114391925 + A-rich Low_complexity Low_complexity 1 43 0 2188 130 0 0 chr10 31199488 31199787 -114389501 + AluSx SINE Alu 1 299 -13 1491 103 121 52 chr10 31200528 31200800 -114388488 + AluSx SINE Alu 1 291 -21 1471 196 33 33 chr10 31201262 31201563 -114387725 + AluJo SINE Alu 1 301 -1 1712 139 161 60 chr10 31202087 31202142 -114387146 - MER4A LTR ERV1 0 664 616 2436 106 0 0 chr10 31202142 31202454 -114386834 + AluSx SINE Alu 1 312 0 1712 139 161 60 chr10 31202454 31202764 -114386524 - MER4A LTR ERV1 -48 616 262 564 96 32 21 chr10 31202767 31202861 -114386427 - MER4A LTR ERV1 -569 95 1 322 194 9 9 chr10 31203726 31203834 -114385454 + GA-rich Low_complexity Low_complexity 1 108 0 307 283 158 26 chr10 31204015 31204167 -114385121 - MER5A DNA MER1_type 0 189 18 2391 86 6 13 chr10 31204315 31204629 -114384659 - AluSx SINE Alu 0 312 1 1518 178 48 7 chr10 31204655 31205026 -114384262 + AluJo SINE Alu 2 383 0 2486 63 7 0 chr10 31205112 31205414 -114383874 + AluY SINE Alu 1 304 -7 183 258 24 97 chr10 31205758 31205882 -114383406 - MIR SINE MIR -64 144 30 1717 168 40 23 chr10 31206202 31206506 -114382782 - AluJo SINE Alu -3 309 1 439 259 0 30 chr10 31206506 31206637 -114382651 - MIR SINE MIR -38 224 98 1379 277 138 31 chr10 31206648 31206704 -114382584 - MLT1G1 LTR MaLR -5 590 541 2448 72 0 3 chr10 31206704 31206997 -114382291 + AluSc SINE Alu 1 292 -17 1379 277 138 31 chr10 31206997 31207460 -114381828 - MLT1G1 LTR MaLR -54 541 15 202 294 88 0 chr10 31207484 31207552 -114381736 - MIR SINE MIR -175 87 14 662 142 126 24 chr10 31207765 31207892 -114381396 + FLAM_C SINE Alu 3 142 -1 260 343 20 10 chr10 31207904 31208003 -114381285 - MER5A DNA MER1_type -5 184 85 1813 155 17 31 chr10 31208009 31208300 -114380988 + AluJo SINE Alu 1 287 -25 184 341 22 22 chr10 31208315 31208406 -114380882 - MER5A DNA MER1_type -92 97 7 782 285 141 52 chr10 31208414 31208909 -114380379 + LTR67 LTR ERVL 5 543 -14 1571 157 80 0 chr10 31209068 31209342 -114379946 - AluJo SINE Alu -16 296 1 2563 40 7 0 chr10 31209403 31209699 -114379589 - AluY SINE Alu -13 298 1 615 223 0 8 chr10 31209917 31210038 -114379250 + FLAM_A SINE Alu 2 121 -12 2385 104 0 0 chr10 31210550 31210881 -114378407 - AluSx SINE Alu 0 312 1 1399 220 300 3 chr10 31211013 31211626 -114377662 + LTR50 LTR ERVL 1 795 0 662 213 0 16 chr10 31211780 31211907 -114377381 + FLAM_C SINE Alu 2 126 -17 462 275 8 22 chr10 31212552 31212788 -114376500 + L1MDa LINE L1 1259 1499 -5031 908 231 17 54 chr10 31212891 31213189 -114376099 + L1MA9 LINE L1 5996 6282 -30 2282 122 0 0 chr10 31213279 31213591 -114375697 - AluSx SINE Alu 0 312 1 363 286 51 34 chr10 31213838 31214013 -114375275 - MIR SINE MIR -15 247 70 1638 164 47 89 chr10 31214613 31215064 -114374224 - MSTB1 LTR MaLR 0 432 1 461 320 144 19 chr10 31215428 31215740 -114373548 + L2 LINE L2 2959 3309 -4 282 95 0 0 chr10 31217458 31217500 -114371788 + (CA)n Simple_repeat Simple_repeat 1 42 0 198 0 0 0 chr10 31217499 31217521 -114371767 + (GA)n Simple_repeat Simple_repeat 2 23 0 * 187 318 45 11 chr10 31217823 31217911 -114371377 + L2 LINE L2 3182 3272 -41 300 281 45 0 chr10 31218074 31218163 -114371125 - L1MC4 LINE L1 -1337 6705 6613 267 152 0 0 chr10 31218163 31218209 -114371079 + (TA)n Simple_repeat Simple_repeat 1 46 0 186 103 0 0 chr10 31218208 31218237 -114371051 + (GA)n Simple_repeat Simple_repeat 2 30 0 * 1607 187 3 7 chr10 31218239 31218522 -114370766 - AluJo SINE Alu -30 282 1 440 303 77 0 chr10 31218685 31218840 -114370448 + MIR SINE MIR 81 247 -15 204 227 23 0 chr10 31219548 31219592 -114369696 - L2 LINE L2 -14 3258 3214 198 267 44 22 chr10 31219601 31219691 -114369597 - L2 LINE L2 -1254 2060 1969 218 254 28 0 chr10 31221789 31221860 -114367428 + L2 LINE L2 3201 3273 -40 739 253 178 18 chr10 31222054 31222442 -114366846 + MLT1J2 LTR MaLR 1 450 0 253 253 53 0 chr10 31222819 31222894 -114366394 + A-rich Low_complexity Low_complexity 4 82 0 2347 88 14 0 chr10 31223612 31223909 -114365379 - AluSc SINE Alu -7 302 2 428 274 76 32 chr10 31225104 31225261 -114364027 - L2 LINE L2 0 3313 3150 573 215 5 126 chr10 31226959 31227150 -114362138 + MLT1A1 LTR MaLR 198 365 0 1556 165 11 37 chr10 31227285 31227558 -114361730 - MLT1A1 LTR MaLR 0 365 100 2491 70 0 0 chr10 31228872 31229171 -114360117 - AluY SINE Alu -12 299 1 268 170 64 32 chr10 31229774 31229868 -114359420 - MER113 DNA MER1_type? -405 116 20 1650 151 33 15 chr10 31230531 31230826 -114358462 + AluJo SINE Alu 7 306 0 252 0 0 0 chr10 31231556 31231584 -114357704 + (CA)n Simple_repeat Simple_repeat 1 28 0 5123 132 30 6 chr10 31231617 31232421 -114356867 + L1PA16 LINE L1 5344 6166 0 225 71 0 0 chr10 31232428 31232456 -114356832 + AluSp SINE Alu 7 34 -266 1885 77 6 144 chr10 31232456 31232782 -114356506 + AluSp SINE Alu 18 298 -15 405 58 0 0 chr10 31232864 31232916 -114356372 + (TG)n Simple_repeat Simple_repeat 1 52 0 626 308 21 17 chr10 31233450 31233684 -114355604 - MIR SINE MIR 0 262 28 5076 131 8 24 chr10 31234050 31234846 -114354442 + LTR39 LTR ERV1 1 783 0 2335 109 0 0 chr10 31235013 31235317 -114353971 + AluSg SINE Alu 1 304 -6 2400 169 17 21 chr10 31235876 31236076 -114353212 + MSTB LTR MaLR 1 200 -226 2259 113 3 0 chr10 31236076 31236385 -114352903 + AluSx SINE Alu 1 310 -2 2400 169 17 21 chr10 31236385 31236604 -114352684 + MSTB LTR MaLR 200 418 -8 1183 214 105 27 chr10 31237165 31237616 -114351672 + MLT1E LTR MaLR 3 557 -31 1739 108 0 9 chr10 31237646 31237877 -114351411 - AluSx SINE Alu -83 229 1 320 225 11 0 chr10 31240014 31240103 -114349185 + GA-rich Low_complexity Low_complexity 1 90 0 637 174 35 99 chr10 31240126 31240197 -114349091 - MLT1A2 LTR MaLR -213 161 87 2555 66 7 0 chr10 31240197 31240500 -114348788 + AluY SINE Alu 1 305 -6 637 174 35 99 chr10 31240500 31240600 -114348688 - MLT1A2 LTR MaLR -287 87 1 1618 293 13 14 chr10 31240603 31241225 -114348063 - L2 LINE L2 -2004 1310 690 1830 200 36 34 chr10 31241226 31241660 -114347628 + LTR37B LTR ERV1 7 444 -24 2122 123 19 16 chr10 31241660 31241970 -114347318 - AluSx SINE Alu -1 311 1 1129 279 57 36 chr10 31242004 31242095 -114347193 - L2 LINE L2 -2618 696 608 2353 96 3 0 chr10 31242095 31242397 -114346891 + AluSx SINE Alu 1 303 -9 1129 279 57 36 chr10 31242397 31242725 -114346563 - L2 LINE L2 -2706 608 268 552 128 10 78 chr10 31242817 31242916 -114346372 + MLT1B LTR MaLR 1 92 -298 1285 189 60 91 chr10 31242916 31243291 -114345997 - MLT1A1 LTR MaLR -2 426 1 1020 184 148 41 chr10 31243292 31243352 -114345936 + MLT1B LTR MaLR 91 143 -247 2304 99 0 0 chr10 31243352 31243645 -114345643 - AluSq SINE Alu -20 293 1 1020 184 148 41 chr10 31243645 31243855 -114345433 + MLT1B LTR MaLR 143 390 0 288 29 0 0 chr10 31244150 31244185 -114345103 + MADE1 DNA Mariner 2 36 -44 2268 111 0 3 chr10 31244925 31245232 -114344056 + AluSx SINE Alu 1 306 -6 2360 114 48 69 chr10 31245752 31245974 -114343314 - MSTC LTR MaLR 0 428 203 2214 128 0 3 chr10 31245974 31246286 -114343002 - AluSx SINE Alu -1 311 1 2360 114 48 69 chr10 31246286 31246399 -114342889 - MSTC LTR MaLR -225 203 102 2338 114 3 0 chr10 31246399 31246707 -114342581 - AluSx SINE Alu -3 309 1 2360 114 48 69 chr10 31246707 31246807 -114342481 - MSTC LTR MaLR -326 102 1 213 265 0 0 chr10 31248052 31248101 -114341187 + (GGCTG)n Simple_repeat Simple_repeat 5 53 0 26 30 0 0 chr10 31249746 31249779 -114339509 + AT_rich Low_complexity Low_complexity 1 33 0 1781 175 0 16 chr10 31249782 31250085 -114339203 - AluJo SINE Alu -14 298 1 2313 108 36 28 chr10 31250497 31250858 -114338430 + THE1B LTR MaLR 1 364 0 2198 116 0 0 chr10 31252534 31252819 -114336469 + AluSg SINE Alu 9 293 -17 22 56 0 0 chr10 31253177 31253213 -114336075 + AT_rich Low_complexity Low_complexity 1 36 0 456 296 74 40 chr10 31253352 31253649 -114335639 - L2 LINE L2 -2 3311 3005 213 121 0 0 chr10 31253747 31253780 -114335508 + (CA)n Simple_repeat Simple_repeat 2 34 0 916 130 0 0 chr10 31254111 31254234 -114335054 + FRAM SINE Alu 30 152 -24 1315 81 0 0 chr10 31254514 31254688 -114334600 - L1MA1 LINE L1 0 6302 6129 1980 107 0 86 chr10 31255645 31255971 -114333317 + AluSq SINE Alu 1 298 -15 2358 100 3 0 chr10 31256293 31256603 -114332685 - AluSx SINE Alu -1 311 1 313 235 10 10 chr10 31256628 31256730 -114332558 + CT-rich Low_complexity Low_complexity 3 104 0 264 372 19 29 chr10 31256868 31257059 -114332229 - MIR SINE MIR -55 207 19 202 353 49 38 chr10 31257143 31257327 -114331961 - MER5A DNA MER1_type -1 188 3 758 219 44 11 chr10 31257928 31258111 -114331177 - MER5A DNA MER1_type 0 189 1 2307 100 10 0 chr10 31258269 31258570 -114330718 + AluSx SINE Alu 1 304 -8 2077 138 33 30 chr10 31259270 31259632 -114329656 + THE1B LTR MaLR 2 364 0 2273 86 0 26 chr10 31260101 31260404 -114328884 - AluSp SINE Alu -16 297 3 305 280 21 29 chr10 31260709 31260823 -114328465 + MIR3 SINE MIR 67 180 -28 1728 281 156 7 chr10 31261289 31261764 -114327524 + HAL1 LINE L1 2 405 -2102 1739 128 55 14 chr10 31261764 31262053 -114327235 + AluJo SINE Alu 5 305 -7 1728 281 156 7 chr10 31262053 31262328 -114326960 + HAL1 LINE L1 405 864 -1643 198 0 0 0 chr10 31262346 31262368 -114326920 + (TA)n Simple_repeat Simple_repeat 2 23 0 657 285 51 5 chr10 31262763 31262977 -114326311 - MIR SINE MIR -13 249 26 25 0 0 0 chr10 31263074 31263099 -114326189 + AT_rich Low_complexity Low_complexity 1 25 0 644 303 82 22 chr10 31263117 31263484 -114325804 - L1ME LINE L1 -342 5779 5391 1700 174 23 48 chr10 31264035 31264345 -114324943 - AluJo SINE Alu -10 302 1 471 78 0 0 chr10 31265073 31265137 -114324151 + (CATTT)n Simple_repeat Simple_repeat 2 65 0 1886 133 0 14 chr10 31265138 31265424 -114323864 - AluJb SINE Alu -30 282 1 1282 62 0 19 chr10 31265463 31265653 -114323635 + AluSp SINE Alu 129 315 0 318 290 19 37 chr10 31266652 31266814 -114322474 + MLT1L LTR MaLR 22 180 -435 2228 116 7 0 chr10 31266837 31267147 -114322141 - AluSx SINE Alu 0 312 1 270 267 99 30 chr10 31267246 31267347 -114321941 + MLT1L LTR MaLR 371 478 -137 2324 105 0 0 chr10 31267680 31267976 -114321312 + AluSq SINE Alu 1 296 -17 232 121 0 0 chr10 31267993 31268026 -114321262 - LTR54 LTR ERV1 -71 439 407 1326 105 6 11 chr10 31268066 31268247 -114321041 - L1PB1 LINE L1 0 6151 5972 373 231 0 0 chr10 31268483 31268561 -114320727 - MER116 DNA Mariner -1 79 2 1598 150 31 69 chr10 31268993 31269313 -114319975 + AluJb SINE Alu 1 308 -4 373 229 108 90 chr10 31269327 31269400 -114319888 + L1ME4a LINE L1 5600 5670 -451 308 64 21 0 chr10 31269400 31269447 -114319841 + (TAGA)n Simple_repeat Simple_repeat 1 48 0 2072 109 22 0 chr10 31269454 31269729 -114319559 + AluSx SINE Alu 10 290 -22 373 229 108 90 chr10 31269729 31269750 -114319538 + L1ME4a LINE L1 5675 5694 -427 399 41 0 0 chr10 31269750 31269799 -114319489 + (TAGA)n Simple_repeat Simple_repeat 4 52 0 373 229 108 90 chr10 31269799 31269918 -114319370 + L1ME4a LINE L1 5694 5826 -295 378 241 34 87 chr10 31269976 31270183 -114319105 + L2 LINE L2 3107 3302 -11 2026 142 0 3 chr10 31270640 31270951 -114318337 + AluJo SINE Alu 1 310 -2 1404 157 35 4 chr10 31271521 31271751 -114317537 - AluJo SINE Alu -5 307 71 589 285 23 50 chr10 31271822 31272043 -114317245 - MIR SINE MIR -11 251 37 393 22 0 0 chr10 31273117 31273163 -114316125 + (TG)n Simple_repeat Simple_repeat 1 46 0 2217 105 34 0 chr10 31273302 31273598 -114315690 + AluSx SINE Alu 1 306 -6 347 354 88 32 chr10 31273628 31273802 -114315486 + L2 LINE L2 1734 1897 -1417 528 160 118 25 chr10 31273802 31273921 -114315367 - MER94 DNA DNA -4 130 1 347 354 88 32 chr10 31273921 31274314 -114314974 + L2 LINE L2 1897 2341 -973 2119 113 10 0 chr10 31274314 31274605 -114314683 + AluSx SINE Alu 1 294 -18 347 354 88 32 chr10 31274605 31274658 -114314630 + L2 LINE L2 2341 2390 -924 313 249 46 19 chr10 31274724 31274848 -114314440 + MLT1H LTR MaLR 437 555 0 388 280 102 47 chr10 31275737 31275973 -114313315 + MLT1H LTR MaLR 4 252 -297 357 198 47 93 chr10 31276047 31276216 -114313072 + MLT1H LTR MaLR 387 552 -3 697 113 9 9 chr10 31276472 31276587 -114312701 + HSMAR2 DNA Mariner 1186 1300 -2 3761 156 61 119 chr10 31276653 31277575 -114311713 + MER21A LTR ERV1 36 903 -28 763 255 42 42 chr10 31277880 31278119 -114311169 - MLT1C LTR MaLR -22 445 207 840 163 0 15 chr10 31278120 31278255 -114311033 - FLAM_C SINE Alu 0 133 1 1701 168 3 34 chr10 31278451 31278742 -114310546 - AluJo SINE Alu -30 282 1 660 262 2 3 chr10 31278746 31278899 -114310389 - MLT1C LTR MaLR -215 175 22 223 257 19 67 chr10 31278944 31279049 -114310239 + L2 LINE L2 2773 2872 -442 1313 112 0 11 chr10 31279499 31279678 -114309610 + AluSg/x SINE Alu 84 260 -52 946 176 106 10 chr10 31279982 31280181 -114309107 + L1PB4 LINE L1 5895 6112 -44 1257 265 75 43 chr10 31280334 31280802 -114308486 - LTR33 LTR ERVL -38 483 1 485 284 32 42 chr10 31280890 31281080 -114308208 - MIR3 SINE MIR -7 201 14 222 37 0 0 chr10 31281863 31281890 -114307398 + (GTTTG)n Simple_repeat Simple_repeat 2 28 0 300 320 96 0 chr10 31282194 31282319 -114306969 - L2 LINE L2 0 3272 3136 542 245 41 54 chr10 31282516 31282663 -114306625 + MIR SINE MIR 10 154 -108 2153 101 24 0 chr10 31282965 31283252 -114306036 + AluSp SINE Alu 1 294 -19 786 156 16 0 chr10 31283281 31283403 -114305885 + FLAM_C SINE Alu 1 124 -19 1688 135 43 46 chr10 31283608 31283911 -114305377 + AluSx SINE Alu 1 302 -10 1858 153 0 27 chr10 31284763 31285064 -114304224 + AluSx SINE Alu 1 293 -19 1440 156 36 57 chr10 31285899 31286200 -114303088 - AluJo SINE Alu -16 296 2 261 83 0 0 chr10 31286200 31286236 -114303052 + (A)n Simple_repeat Simple_repeat 1 36 0 403 231 146 75 chr10 31286273 31286594 -114302694 - L1MC5 LINE L1 -66 7895 7552 990 200 25 10 chr10 31286608 31286808 -114302480 + AluJb SINE Alu 86 288 -24 418 285 106 22 chr10 31286835 31287156 -114302132 - L1MC5 LINE L1 -415 7393 7261 1152 249 63 92 chr10 31287194 31287786 -114301502 - L1MC4 LINE L1 -733 7228 6668 979 276 47 17 chr10 31287878 31288284 -114301004 - L1 LINE L1 -1710 4436 4019 243 0 0 0 chr10 31288291 31288318 -114300970 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 561 131 0 0 chr10 31288320 31288404 -114300884 - AluY SINE Alu -10 301 218 403 209 89 73 chr10 31288438 31288629 -114300659 - L1 LINE L1 -2157 3989 3796 380 304 0 0 chr10 31289718 31289843 -114299445 + (CCA)n Simple_repeat Simple_repeat 2 126 0 307 320 0 0 chr10 31290098 31290201 -114299087 + (CCA)n Simple_repeat Simple_repeat 2 104 0 332 226 47 28 chr10 31290460 31290566 -114298722 - L3b LINE CR1 -188 1395 1288 604 266 54 33 chr10 31291769 31291953 -114297335 + MIR SINE MIR 64 251 -11 1947 119 11 0 chr10 31292420 31292698 -114296590 + AluSx SINE Alu 1 281 -31 276 53 0 0 chr10 31292701 31292739 -114296549 + (TAAA)n Simple_repeat Simple_repeat 2 39 0 209 185 37 0 chr10 31292811 31292865 -114296423 + L2 LINE L2 2572 2627 -687 754 141 92 43 chr10 31292865 31293028 -114296260 + MER49 LTR ERV1 1 171 -752 * 3015 126 61 18 chr10 31293009 31293502 -114295786 + MER49 LTR ERV1 410 923 0 473 297 102 95 chr10 31293502 31293756 -114295532 + L2 LINE L2 2624 2875 -397 2174 109 3 3 chr10 31293756 31294050 -114295238 - AluSx SINE Alu -18 294 1 473 297 102 95 chr10 31294050 31294133 -114295155 + L2 LINE L2 2875 2956 -316 1722 172 43 20 chr10 31294133 31294435 -114294853 - AluJb SINE Alu -1 311 3 473 297 102 95 chr10 31294435 31294717 -114294571 + L2 LINE L2 2956 3266 -6 1929 135 80 0 chr10 31295075 31295364 -114293924 - AluSx SINE Alu 0 312 1 1502 229 3 0 chr10 31295797 31296107 -114293181 - L1PB4 LINE L1 0 6156 5846 1068 158 0 18 chr10 31296120 31296291 -114292997 - FRAM SINE Alu -16 160 1 2278 140 0 3 chr10 31296291 31296641 -114292647 - L1PB4 LINE L1 -338 5818 5470 1069 173 42 5 chr10 31296650 31296841 -114292447 + AluJo SINE Alu 85 282 -30 1272 274 102 19 chr10 31298345 31298808 -114290480 - MLT1H1 LTR MaLR -54 501 1 841 156 0 0 chr10 31298975 31299110 -114290178 + FRAM SINE Alu 38 172 -4 381 22 0 0 chr10 31300166 31300212 -114289076 + (TG)n Simple_repeat Simple_repeat 2 47 0 445 273 79 0 chr10 31300644 31300783 -114288505 - MIR SINE MIR -47 215 66 562 266 0 8 chr10 31300783 31300911 -114288377 + MLT1F LTR MaLR 1 127 -415 * 820 220 46 28 chr10 31300909 31301164 -114288124 + MLT1F LTR MaLR 244 505 0 1964 155 135 26 chr10 31301613 31301999 -114287289 + MSTA LTR MaLR 1 428 0 403 248 115 32 chr10 31302206 31302363 -114286925 + MIR SINE MIR 14 183 -79 338 258 11 11 chr10 31302366 31302455 -114286833 - L2 LINE L2 -1 3312 3224 2236 90 0 17 chr10 31302457 31302757 -114286531 + AluSx SINE Alu 1 295 -17 316 183 0 108 chr10 31302784 31302877 -114286411 + MIR SINE MIR 180 262 0 576 191 0 25 chr10 31303607 31303764 -114285524 + CT-rich Low_complexity Low_complexity 3 155 0 372 333 97 6 chr10 31304458 31304671 -114284617 - MIR SINE MIR -28 234 3 185 204 0 56 chr10 31304767 31304821 -114284467 - MIR SINE MIR -84 178 128 1650 179 3 17 chr10 31304826 31305122 -114284166 + AluJo SINE Alu 2 293 -19 313 200 0 113 chr10 31305465 31305545 -114283743 - AluSx SINE Alu -25 277 219 927 135 30 0 chr10 31305545 31305678 -114283610 - AluSx SINE Alu -176 137 1 2065 139 0 3 chr10 31305726 31306035 -114283253 - AluJb SINE Alu -4 308 1 504 184 73 18 chr10 31306087 31306196 -114283092 + LTR67 LTR ERVL 435 549 -8 23 33 0 0 chr10 31306207 31306237 -114283051 + AT_rich Low_complexity Low_complexity 1 30 0 828 258 163 79 chr10 31306670 31307162 -114282126 - MLT1H LTR MaLR -16 533 1 956 139 0 0 chr10 31307183 31307312 -114281976 + FLAM_C SINE Alu 2 130 -3 29 78 0 0 chr10 31307312 31307376 -114281912 + AT_rich Low_complexity Low_complexity 1 64 0 216 0 0 0 chr10 31308247 31308271 -114281017 + (A)n Simple_repeat Simple_repeat 1 24 0 2236 66 30 30 chr10 31309382 31309683 -114279605 - AluY SINE Alu -10 301 1 1073 125 19 0 chr10 31310025 31310185 -114279103 - AluY SINE Alu -18 293 131 229 65 0 0 chr10 31310197 31310243 -114279045 - LTR66 LTR ERVL -171 439 394 1019 53 38 8 chr10 31310276 31310407 -114278881 - AluY SINE Alu -176 135 1 1391 163 40 0 chr10 31311071 31311298 -114277990 - MER46A DNA MER2_type 0 236 1 6421 129 18 42 chr10 31311303 31312300 -114276988 - L1MA6 LINE L1 -1 6299 5335 2171 119 3 0 chr10 31312300 31312594 -114276694 - AluSp SINE Alu -15 298 4 6421 129 18 42 chr10 31312594 31313526 -114275762 - L1MA6 LINE L1 -965 5335 4382 257 0 30 0 chr10 31314776 31314809 -114274479 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 5102 192 22 23 chr10 31315389 31316700 -114272588 + L1MD1 LINE L1 3974 5286 -956 2019 77 29 93 chr10 31316700 31317011 -114272277 + AluY SINE Alu 1 291 -20 5102 192 22 23 chr10 31317011 31317537 -114271751 + L1MD1 LINE L1 5286 5821 -421 2319 115 0 3 chr10 31317537 31317850 -114271438 + AluSx SINE Alu 1 312 0 5102 192 22 23 chr10 31317850 31318020 -114271268 + L1MD1 LINE L1 5821 5990 -252 522 122 22 0 chr10 31318020 31318101 -114271187 + L1MD2 LINE L1 6267 6358 -1 243 0 0 0 chr10 31318315 31318342 -114270946 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1803 158 20 3 chr10 31318345 31318637 -114270651 - AluJb SINE Alu -15 297 1 29 56 0 28 chr10 31319314 31319341 -114269947 + AT_rich Low_complexity Low_complexity 1 27 -43 2654 148 53 93 chr10 31319341 31319610 -114269678 - MER7C DNA MER2_type -2430 598 320 2297 88 3 31 chr10 31319610 31319928 -114269360 + AluSp SINE Alu 1 309 -4 2654 148 53 93 chr10 31319928 31320281 -114269007 - MER7C DNA MER2_type -2708 320 1 29 56 0 28 chr10 31320281 31320325 -114268963 + AT_rich Low_complexity Low_complexity 27 70 0 545 255 43 64 chr10 31320430 31320618 -114268670 + MER5A DNA MER1_type 3 186 -3 1265 227 89 11 chr10 31320656 31320829 -114268459 + MLT1B LTR MaLR 2 160 -230 207 0 0 0 chr10 31320829 31320852 -114268436 + (TC)n Simple_repeat Simple_repeat 2 24 0 1265 227 89 11 chr10 31320852 31321039 -114268249 + MLT1B LTR MaLR 160 390 0 2247 112 3 0 chr10 31321081 31321386 -114267902 + AluSc SINE Alu 1 306 -3 367 293 75 55 chr10 31321510 31321977 -114267311 + L2 LINE L2 2749 3237 -76 839 226 20 20 chr10 31322563 31322758 -114266530 - MER63A DNA MER1_type -15 195 1 1187 188 52 111 chr10 31322982 31323315 -114265973 - MLT1A1 LTR MaLR 0 365 57 1989 152 0 16 chr10 31323315 31323631 -114265657 - AluJo SINE Alu -1 311 1 1187 188 52 111 chr10 31323631 31323685 -114265603 - MLT1A1 LTR MaLR -308 57 1 1033 154 0 0 chr10 31324160 31324322 -114264966 - AluJb SINE Alu -3 309 148 2354 84 0 0 chr10 31324556 31324853 -114264435 + AluY SINE Alu 1 297 -14 367 113 0 0 chr10 31324908 31324961 -114264327 - Alu SINE Alu -7 295 243 4315 21 0 0 chr10 31325075 31325561 -114263727 + L1PA3 LINE L1 5666 6151 -4 297 269 8 30 chr10 31325815 31325949 -114263339 + L1ME LINE L1 5727 5857 -264 25 23 0 23 chr10 31326000 31326021 -114263267 + AT_rich Low_complexity Low_complexity 1 21 -21 2269 91 0 7 chr10 31326021 31326308 -114262980 + AluSq SINE Alu 1 285 -28 25 23 0 23 chr10 31326308 31326329 -114262959 + AT_rich Low_complexity Low_complexity 21 42 0 383 225 28 0 chr10 31326342 31326413 -114262875 - Tigger3(Golem) DNA MER2_type 0 3029 2957 1466 164 8 131 chr10 31326510 31326907 -114262381 - MER7A DNA MER2_type 0 346 1 2223 85 3 3 chr10 31327019 31327487 -114261801 + AluSg SINE Alu 7 474 0 1216 22 11 27 chr10 31327304 31327566 -114261722 + (TAAAA)n Simple_repeat Simple_repeat 1 259 0 1221 168 9 40 chr10 31328788 31329014 -114260274 + AluJo SINE Alu 44 262 -50 180 0 0 0 chr10 31329032 31329052 -114260236 + (TAAAA)n Simple_repeat Simple_repeat 3 22 0 517 289 52 28 chr10 31329052 31329301 -114259987 - L3 LINE CR1 -16 1561 1307 4409 134 65 7 chr10 31329524 31330250 -114259038 + L1PA16 LINE L1 5397 6164 -2 3533 70 16 0 chr10 31330820 31331266 -114258022 + MLT2A2 LTR ERVL 1 453 0 228 292 14 0 chr10 31331675 31331747 -114257541 + L2 LINE L2 3241 3313 0 2198 112 7 0 chr10 31333706 31334001 -114255287 + AluSx SINE Alu 1 297 -15 657 202 61 10 chr10 31335261 31335449 -114253839 + L1M4 LINE L1 5625 5822 -299 2204 110 0 19 chr10 31335649 31335958 -114253330 + AluSx SINE Alu 1 303 -9 1093 226 137 30 chr10 31336436 31336827 -114252461 - MER69 DNA AcHobo -8 2518 2074 2422 94 0 0 chr10 31336827 31337124 -114252164 + AluSq SINE Alu 1 297 -16 1093 226 137 30 chr10 31337124 31337169 -114252119 - MER69 DNA AcHobo -452 2074 2035 1770 271 41 36 chr10 31337175 31337473 -114251815 - MER69 DNA AcHobo -620 606 311 2417 86 3 0 chr10 31337473 31337797 -114251491 + AluSp SINE Alu 1 325 0 1770 271 41 36 chr10 31337797 31337999 -114251289 - MER69 DNA AcHobo -915 311 112 1886 153 7 0 chr10 31337999 31338286 -114251002 + AluJo SINE Alu 1 289 -23 405 0 0 0 chr10 31338288 31338333 -114250955 + (TG)n Simple_repeat Simple_repeat 2 46 0 1770 271 41 36 chr10 31338333 31338411 -114250877 - MER69 DNA AcHobo -1114 112 18 466 260 78 13 chr10 31338484 31338638 -114250650 + L2 LINE L2 3150 3313 0 272 260 19 67 chr10 31339335 31339439 -114249849 - MIR SINE MIR -46 162 64 1759 164 24 7 chr10 31339633 31339920 -114249368 + AluJb SINE Alu 3 294 -18 357 202 227 0 chr10 31340440 31340559 -114248729 + MIR SINE MIR 51 196 -66 1817 166 36 0 chr10 31340667 31340968 -114248320 - AluJb SINE Alu 0 312 1 1349 225 70 51 chr10 31341322 31341400 -114247888 + MER63 DNA MER1_type 682 757 -304 1728 177 3 20 chr10 31341400 31341699 -114247589 + AluJo SINE Alu 1 294 -18 1349 225 70 51 chr10 31341699 31341993 -114247295 + MER63 DNA MER1_type 757 1061 0 385 189 20 133 chr10 31342000 31342083 -114247205 - L2 LINE L2 -695 2619 2528 342 0 0 0 chr10 31342083 31342121 -114247167 + (TG)n Simple_repeat Simple_repeat 1 38 0 2246 110 0 0 chr10 31342130 31342422 -114246866 - AluSx SINE Alu -20 292 1 385 189 20 133 chr10 31342422 31342524 -114246764 - L2 LINE L2 -794 2520 2446 298 246 9 9 chr10 31342805 31342915 -114246373 + GA-rich Low_complexity Low_complexity 2 111 0 2200 107 0 22 chr10 31343089 31343408 -114245880 + AluSx SINE Alu 1 312 0 802 167 8 0 chr10 31343695 31343827 -114245461 + FLAM_A SINE Alu 1 133 0 290 284 153 59 chr10 31345401 31345521 -114243767 - MIR SINE MIR -16 246 139 2229 92 3 0 chr10 31345521 31345840 -114243448 + AluSp SINE Alu 1 320 0 290 284 153 59 chr10 31345840 31345940 -114243348 - MIR SINE MIR -123 139 4 323 262 48 19 chr10 31346219 31346322 -114242966 - L2 LINE L2 0 3313 3208 603 228 62 12 chr10 31346881 31347043 -114242245 + MLT1D LTR MaLR 7 176 -329 2107 112 4 0 chr10 31347046 31347323 -114241965 + AluSp SINE Alu 1 278 -35 641 221 15 25 chr10 31347404 31347592 -114241696 + MLT1D LTR MaLR 224 505 0 662 233 0 0 chr10 31347809 31347938 -114241350 - FLAM_A SINE Alu -1 132 4 2244 117 0 0 chr10 31351449 31351740 -114237548 + AluSx SINE Alu 1 291 -21 294 271 78 42 chr10 31351940 31352132 -114237156 + L1MEd LINE L1 1062 1260 -4945 276 345 35 9 chr10 31352359 31352475 -114236813 + L1MEd LINE L1 1540 1658 -4738 3983 99 9 7 chr10 31352588 31353164 -114236124 - L1PA13 LINE L1 0 6163 5587 215 265 0 0 chr10 31353314 31353363 -114235925 + A-rich Low_complexity Low_complexity 1 49 0 4043 146 12 17 chr10 31355558 31355831 -114233457 + L1PA15 LINE L1 5513 5786 -379 2381 81 0 10 chr10 31355831 31356129 -114233159 + AluY SINE Alu 1 295 -16 4043 146 12 17 chr10 31356129 31356511 -114232777 + L1PA15 LINE L1 5786 6165 0 1833 167 3 10 chr10 31357080 31357391 -114231897 + AluJo SINE Alu 1 309 -3 240 279 97 11 chr10 31358846 31358950 -114230338 + MIR SINE MIR 37 136 -72 186 43 0 0 chr10 31358961 31358984 -114230304 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 396 269 141 6 chr10 31359314 31359470 -114229818 - MIR3 SINE MIR -13 195 19 240 220 0 0 chr10 31360288 31360338 -114228950 - MLT1K LTR MaLR -15 573 524 2202 120 0 0 chr10 31360698 31360989 -114228299 + AluSc SINE Alu 1 291 -18 549 310 0 0 chr10 31361543 31361717 -114227571 + MER5B DNA MER1_type 1 174 -4 2065 118 66 41 chr10 31361717 31362083 -114227205 + THE1C LTR MaLR 1 375 0 211 230 34 142 chr10 31362105 31362253 -114227035 + MER5B DNA MER1_type 17 148 -30 195 274 55 50 chr10 31362242 31362330 -114226958 - MER5A DNA MER1_type -54 135 39 * 260 244 0 56 chr10 31362409 31362499 -114226789 + MER5A DNA MER1_type 25 109 -80 375 267 22 37 chr10 31362533 31362646 -114226642 - MER5B DNA MER1_type -2 176 64 2283 106 0 13 chr10 31362646 31362948 -114226340 - AluSx SINE Alu -14 298 1 375 267 22 37 chr10 31362948 31362969 -114226319 - MER5B DNA MER1_type -114 64 44 192 263 0 0 chr10 31363532 31363570 -114225718 + L2 LINE L2 3217 3254 -18 1648 167 3 21 chr10 31363738 31363883 -114225405 - AluJo SINE Alu -30 282 136 207 0 0 0 chr10 31363883 31363906 -114225382 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 1938 137 4 7 chr10 31363908 31364185 -114225103 - AluSx SINE Alu -36 276 1 1648 167 3 21 chr10 31364185 31364323 -114224965 - AluJo SINE Alu -177 135 1 201 39 0 0 chr10 31365240 31365266 -114224022 + (A)n Simple_repeat Simple_repeat 1 26 0 21 36 0 0 chr10 31365476 31365504 -114223784 + AT_rich Low_complexity Low_complexity 1 28 0 1910 125 3 34 chr10 31365723 31366019 -114223269 + AluJb SINE Alu 22 308 -4 2624 171 42 9 chr10 31366367 31366817 -114222471 - MER70A LTR ERVL -7 465 1 2278 150 5 19 chr10 31367515 31367882 -114221406 - THE1B LTR MaLR 0 364 3 1934 204 25 6 chr10 31368399 31368757 -114220531 - MLT1A1 LTR MaLR 0 365 1 534 295 61 13 chr10 31368905 31369212 -114220076 - L1ME LINE L1 -419 5751 5419 523 287 46 71 chr10 31369256 31369622 -114219666 - L1ME LINE L1 -813 5333 4977 180 0 0 0 chr10 31369643 31369663 -114219625 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 265 253 27 93 chr10 31369697 31369905 -114219383 - L1ME LINE L1 -1537 4609 4420 1951 148 13 20 chr10 31369905 31370208 -114219080 - AluJb SINE Alu -11 301 1 265 253 27 93 chr10 31370208 31370256 -114219032 - L1ME LINE L1 -1726 4420 4370 1980 185 21 3 chr10 31370444 31370774 -114218514 + MER1B DNA MER1_type 2 337 0 312 384 9 22 chr10 31370817 31370844 -114218444 - L1ME LINE L1 -1975 4171 4145 218 32 32 0 chr10 31370844 31370875 -114218413 + (TG)n Simple_repeat Simple_repeat 1 32 0 312 384 9 22 chr10 31370875 31371071 -114218217 - L1ME LINE L1 -2001 4145 3951 2397 75 0 13 chr10 31371139 31371447 -114217841 + AluSx SINE Alu 1 304 -8 6684 133 37 8 chr10 31371495 31373032 -114216256 - L1MA6 LINE L1 -5 6295 4706 4933 98 9 2 chr10 31373169 31373814 -114215474 - L1PA11 LINE L1 -2 6172 5523 21 0 0 0 chr10 31373879 31373900 -114215388 + AT_rich Low_complexity Low_complexity 1 21 0 2305 85 10 13 chr10 31374059 31374364 -114214924 - AluY SINE Alu -7 304 1 337 304 102 54 chr10 31374364 31375118 -114214170 - L1ME LINE L1 -2838 3308 2519 210 91 0 0 chr10 31376244 31376277 -114213011 + (CA)n Simple_repeat Simple_repeat 2 34 0 2107 99 3 7 chr10 31376912 31377194 -114212094 - AluSp SINE Alu -32 281 1 2233 108 0 0 chr10 31377194 31377490 -114211798 - AluSg1 SINE Alu -13 296 1 2790 50 3 0 chr10 31378032 31378355 -114210933 - L1PA13 LINE L1 -18 6145 5822 1728 121 0 0 chr10 31378356 31378587 -114210701 - AluSg/x SINE Alu -10 300 70 331 215 0 25 chr10 31379153 31379232 -114210056 + L2 LINE L2 3163 3239 -74 344 327 71 15 chr10 31379930 31380196 -114209092 + LTR33 LTR ERVL 241 521 0 966 261 24 10 chr10 31380196 31380487 -114208801 - HAL1 LINE L1 -835 1672 1378 412 247 0 0 chr10 31380496 31380569 -114208719 - Tigger7 DNA MER2_type -11 2476 2404 1414 232 0 4 chr10 31380595 31380849 -114208439 - Tigger7 DNA MER2_type -2234 253 1 2673 261 95 51 chr10 31380867 31381885 -114207403 - HAL1 LINE L1 -1165 1342 370 189 0 0 0 chr10 31381885 31381906 -114207382 + (TTG)n Simple_repeat Simple_repeat 1 21 0 2673 261 95 51 chr10 31381906 31382126 -114207162 - HAL1 LINE L1 -2137 370 44 2203 230 68 30 chr10 31382126 31382726 -114206562 - MLT1E2 LTR MaLR -1 625 3 2673 261 95 51 chr10 31382726 31382770 -114206518 - HAL1 LINE L1 -2463 44 3 529 325 45 29 chr10 31382802 31383110 -114206178 + L3 LINE CR1 1136 1448 -129 1508 180 71 19 chr10 31383193 31383515 -114205773 + MER44D DNA MER2_type 1 609 0 644 198 33 0 chr10 31383616 31383737 -114205551 - L2 LINE L2 -1 3312 3188 2280 118 0 0 chr10 31384250 31384556 -114204732 - AluSx SINE Alu -2 310 5 603 254 40 23 chr10 31385102 31385275 -114204013 + MIR SINE MIR 86 261 -1 213 328 123 0 chr10 31385476 31385598 -114203690 + MIR SINE MIR 69 205 -57 4456 203 94 46 chr10 31386799 31388063 -114201225 - L1M4 LINE L1 -1218 4928 3604 233 139 26 43 chr10 31388217 31388293 -114200995 + CT-rich Low_complexity Low_complexity 1 74 0 22 35 0 0 chr10 31388980 31389009 -114200279 + AT_rich Low_complexity Low_complexity 1 29 0 527 284 105 36 chr10 31389233 31389680 -114199608 - HAL1 LINE L1 -947 1560 1083 597 282 167 8 chr10 31389688 31389940 -114199348 - L2 LINE L2 -7 3306 3015 4155 88 2 33 chr10 31390579 31391149 -114198139 + L1PB1 LINE L1 5597 6148 -3 691 285 120 37 chr10 31391420 31391795 -114197493 - MLT1J2 LTR MaLR -44 406 1 383 300 106 12 chr10 31392771 31392941 -114196347 + MIR SINE MIR 67 252 -10 205 377 23 31 chr10 31393692 31393822 -114195466 + MIR3 SINE MIR 3 131 -77 239 158 0 0 chr10 31394037 31394075 -114195213 + L1P2 LINE L1 5713 5750 -404 1546 191 0 4 chr10 31394109 31394365 -114194923 - AluJo SINE Alu -56 256 2 651 283 75 42 chr10 31395174 31395482 -114193806 + L1MD2 LINE L1 22 339 -6201 2046 225 96 67 chr10 31395612 31396581 -114192707 + L1MD2 LINE L1 876 1870 -4670 * 7478 234 46 33 chr10 31396569 31398838 -114190450 + L1MD2 LINE L1 3292 5529 -1224 1905 92 56 39 chr10 31398838 31399143 -114190145 + AluY SINE Alu 1 310 -1 7478 234 46 33 chr10 31399143 31400075 -114189213 + L1MD2 LINE L1 5529 6538 -215 237 65 0 0 chr10 31400075 31400106 -114189182 + (CA)n Simple_repeat Simple_repeat 2 32 0 7478 234 46 33 chr10 31400106 31400315 -114188973 + L1MD2 LINE L1 6538 6743 -10 1502 189 4 0 chr10 31400335 31400600 -114188688 + AluJo SINE Alu 36 301 -11 317 313 134 30 chr10 31403037 31403171 -114186117 + MER5B DNA MER1_type 30 177 -1 312 275 11 33 chr10 31403504 31403595 -114185693 - MIR SINE MIR -3 259 171 2220 102 65 26 chr10 31403608 31404143 -114185145 - MER51A LTR ERV1 0 634 1 554 288 41 0 chr10 31404143 31404313 -114184975 - MIR SINE MIR -84 178 2 2174 107 3 13 chr10 31404977 31405276 -114184012 + AluSx SINE Alu 1 296 -16 307 158 0 0 chr10 31406932 31406989 -114182299 - L1MB2 LINE L1 0 6171 6115 1195 86 0 0 chr10 31406989 31407140 -114182148 - AluSg/x SINE Alu -39 273 123 1781 36 0 2 chr10 31407144 31407558 -114181730 - SVA Other Other -893 1386 268 2312 98 7 0 chr10 31407701 31407997 -114181291 - AluSx SINE Alu -14 298 1 241 317 211 12 chr10 31408183 31408344 -114180944 + MIR3 SINE MIR 16 208 0 496 258 163 38 chr10 31408378 31408618 -114180670 - L2 LINE L2 -2 3311 3042 210 280 93 51 chr10 31409287 31409320 -114179968 - L2 LINE L2 -3 3310 3280 2464 58 3 19 chr10 31409320 31409633 -114179655 + AluY SINE Alu 1 308 -3 210 280 93 51 chr10 31409633 31409717 -114179571 - L2 LINE L2 -33 3280 3188 1013 268 43 85 chr10 31409781 31409820 -114179468 - MLT1I LTR MaLR 0 409 370 2186 130 0 0 chr10 31409820 31410120 -114179168 - AluSx SINE Alu -12 300 1 1013 268 43 85 chr10 31410120 31410502 -114178786 - MLT1I LTR MaLR -39 370 6 8907 112 14 18 chr10 31411387 31411850 -114177438 + HSMAR2 DNA Mariner 3 467 -835 239 79 26 0 chr10 31411850 31411888 -114177400 + (CTAA)n Simple_repeat Simple_repeat 3 41 0 8907 112 14 18 chr10 31411888 31412730 -114176558 + HSMAR2 DNA Mariner 467 1302 0 442 267 46 0 chr10 31413193 31413324 -114175964 + MIR SINE MIR 123 259 -3 1526 174 56 7 chr10 31413345 31413615 -114175673 + AluJo SINE Alu 12 294 -18 212 319 39 77 chr10 31413775 31413982 -114175306 + L2 LINE L2 2557 2755 -559 2194 137 0 32 chr10 31414127 31414471 -114174817 + MER1B DNA MER1_type 7 339 0 658 262 15 50 chr10 31414535 31414764 -114174524 - MLT1L LTR MaLR -2 609 295 646 250 23 23 chr10 31414809 31414981 -114174307 - MIR SINE MIR -88 174 3 252 307 13 0 chr10 31415245 31415320 -114173968 + (TATG)n Simple_repeat Simple_repeat 1 76 0 2207 95 3 46 chr10 31415685 31416011 -114173277 - AluSx SINE Alu 0 312 1 284 130 0 37 chr10 31416021 31416075 -114173213 - LTR29 LTR ERV1 -67 555 471 1827 122 91 0 chr10 31417532 31417818 -114171470 + AluSx SINE Alu 1 312 0 421 278 19 0 chr10 31417855 31417963 -114171325 + MER117 DNA MER1_type 11 120 -77 856 158 0 15 chr10 31418008 31418141 -114171147 - FLAM_C SINE Alu 0 133 3 413 250 0 11 chr10 31418242 31418330 -114170958 + MIR SINE MIR 36 122 -140 2203 237 140 9 chr10 31418954 31419645 -114169643 + LTR50 LTR ERVL 5 786 -9 2394 79 7 0 chr10 31419865 31420169 -114169119 + AluSp SINE Alu 1 306 -7 1046 97 0 0 chr10 31420762 31420896 -114168392 + AluSq/x SINE Alu 1 134 -179 484 256 29 74 chr10 31421398 31421597 -114167691 - MIR SINE MIR -28 234 46 3475 126 23 2 chr10 31421597 31422113 -114167175 + MER1A DNA MER1_type 1 527 0 484 256 29 74 chr10 31422113 31422155 -114167133 - MIR SINE MIR -216 46 4 406 200 120 10 chr10 31422500 31422600 -114166688 - L2 LINE L2 -3 3310 3200 269 277 48 54 chr10 31422981 31423147 -114166141 + L1ME LINE L1 5588 5752 -369 662 277 63 26 chr10 31423243 31423590 -114165698 + L1ME3A LINE L1 4907 5266 -880 591 259 155 20 chr10 31423599 31423896 -114165392 + L1ME3A LINE L1 5290 5626 -538 1324 244 94 30 chr10 31423973 31424407 -114164881 + MLT1C LTR MaLR 6 467 0 504 273 7 0 chr10 31424413 31424556 -114164732 + L1ME3A LINE L1 5711 5854 -316 2010 110 29 18 chr10 31424654 31424975 -114164313 - AluSx SINE Alu 0 324 1 1601 180 10 35 chr10 31426213 31426502 -114162786 + AluJo SINE Alu 1 282 -30 27 87 0 0 chr10 31426508 31426577 -114162711 + AT_rich Low_complexity Low_complexity 1 69 0 192 303 115 8 chr10 31426862 31426984 -114162304 + MIR SINE MIR 57 191 -71 401 190 0 13 chr10 31427522 31427601 -114161687 + MER116 DNA Mariner 1 78 -2 195 69 0 0 chr10 31428292 31428321 -114160967 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 1771 160 11 0 chr10 31428324 31428592 -114160696 - AluJo SINE Alu -31 281 11 1693 148 10 40 chr10 31428946 31429249 -114160039 - AluJo SINE Alu -18 294 1 2101 115 0 11 chr10 31430018 31430374 -114158914 - AluSq SINE Alu 0 355 3 216 158 0 0 chr10 31430537 31430575 -114158713 + (CA)n Simple_repeat Simple_repeat 2 39 0 864 274 35 25 chr10 31430902 31431216 -114158072 - MARNA DNA Mariner -129 457 141 1368 214 10 17 chr10 31433170 31433459 -114155829 + AluJo SINE Alu 1 287 -25 2185 138 16 24 chr10 31433550 31433927 -114155361 - THE1C LTR MaLR -1 374 1 1835 157 0 38 chr10 31434294 31434607 -114154681 + AluJb SINE Alu 1 301 -11 1921 162 0 10 chr10 31434904 31435218 -114154070 + AluJb SINE Alu 1 311 -1 180 0 0 0 chr10 31438155 31438175 -114151113 + (TG)n Simple_repeat Simple_repeat 1 20 0 24 53 0 0 chr10 31438940 31438978 -114150310 + AT_rich Low_complexity Low_complexity 1 38 0 803 159 0 0 chr10 31439547 31439673 -114149615 - FLAM_C SINE Alu -6 127 2 711 162 3 0 chr10 31439734 31440075 -114149213 + (TA)n Simple_repeat Simple_repeat 1 342 0 927 99 0 0 chr10 31440108 31440249 -114149039 + (TA)n Simple_repeat Simple_repeat 2 142 0 1629 265 140 8 chr10 31440432 31440945 -114148343 - MLT1G LTR MaLR 0 590 10 1164 246 79 3 chr10 31441182 31441512 -114147776 - MLT2B1 LTR ERVL -165 355 1 263 258 45 0 chr10 31441554 31441643 -114147645 - L2 LINE L2 -1 3312 3220 2374 82 0 3 chr10 31442080 31442373 -114146915 - AluY SINE Alu -19 292 1 6822 119 155 87 chr10 31444677 31446268 -114143020 + pTR5 LTR ERV1 741 2438 0 1699 116 4 0 chr10 31446335 31446568 -114142720 + AluSq SINE Alu 34 267 -46 398 210 12 12 chr10 31446666 31446747 -114142541 + MLT1J2 LTR MaLR 22 102 -348 1397 146 203 8 chr10 31447168 31447429 -114141859 + AluJb SINE Alu 1 312 0 921 175 0 85 chr10 31448020 31448130 -114141158 + MER3 DNA MER1_type 16 134 -75 225 0 0 0 chr10 31448130 31448155 -114141133 + (TG)n Simple_repeat Simple_repeat 2 26 0 224 30 30 0 chr10 31448154 31448187 -114141101 + (TA)n Simple_repeat Simple_repeat 1 34 0 * 921 175 0 85 chr10 31448155 31448196 -114141092 + MER3 DNA MER1_type 134 113 -96 1945 113 4 4 chr10 31448196 31448461 -114140827 - AluSq SINE Alu -48 265 1 921 175 0 85 chr10 31448461 31448551 -114140737 + MER3 DNA MER1_type 112 208 -1 789 224 0 42 chr10 31448561 31448753 -114140535 - MER58B DNA MER1_type -1 340 157 1859 172 0 10 chr10 31449792 31450095 -114139193 + AluJo SINE Alu 1 300 -12 2134 99 0 14 chr10 31450117 31450399 -114138889 + AluSx SINE Alu 26 303 -9 1968 143 55 25 chr10 31451782 31452146 -114137142 + THE1C LTR MaLR 1 375 0 1283 201 4 35 chr10 31452806 31452947 -114136341 + AluJo SINE Alu 1 132 -180 213 39 0 0 chr10 31452947 31452973 -114136315 + (TA)n Simple_repeat Simple_repeat 2 27 0 1283 201 4 35 chr10 31452973 31453090 -114136198 + AluJo SINE Alu 132 251 -61 25 31 0 0 chr10 31453104 31453136 -114136152 + AT_rich Low_complexity Low_complexity 1 32 0 268 214 11 0 chr10 31453136 31453314 -114135974 + (TA)n Simple_repeat Simple_repeat 1 180 0 292 286 6 11 chr10 31453402 31453577 -114135711 + (TA)n Simple_repeat Simple_repeat 1 174 0 432 0 0 0 chr10 31453601 31453649 -114135639 + (TG)n Simple_repeat Simple_repeat 2 49 0 2121 120 0 3 chr10 31453964 31454270 -114135018 - AluY SINE Alu 0 305 1 271 276 17 17 chr10 31454391 31454507 -114134781 + L1ME3 LINE L1 5757 5872 -1936 531 308 60 0 chr10 31454758 31454943 -114134345 + MIR SINE MIR 5 200 -62 2322 100 0 13 chr10 31454992 31455303 -114133985 + AluSg SINE Alu 4 310 0 1019 170 6 22 chr10 31455712 31455894 -114133394 - FRAM SINE Alu 0 176 1 2106 90 32 7 chr10 31456419 31456726 -114132562 - AluSx SINE Alu 0 314 1 1974 133 7 14 chr10 31456809 31457103 -114132185 + AluJo SINE Alu 1 292 -20 289 321 110 23 chr10 31458356 31458574 -114130714 - MIR SINE MIR -6 256 20 1049 125 0 0 chr10 31459492 31459628 -114129660 - AluSg/x SINE Alu -65 247 112 884 282 74 57 chr10 31460018 31460863 -114128425 - L1M4 LINE L1 -2279 3867 3003 1522 114 50 5 chr10 31460863 31461083 -114128205 + MER30 DNA MER1_type 1 230 0 884 282 74 57 chr10 31461083 31461188 -114128100 - L1M4 LINE L1 -3143 3003 2901 201 163 0 23 chr10 31463499 31463542 -114125746 + L2 LINE L2 3230 3271 -1 2366 97 7 0 chr10 31464325 31464633 -114124655 - AluSq SINE Alu -3 310 1 292 272 10 10 chr10 31464838 31464941 -114124347 + L1ME3 LINE L1 6056 6158 -4 23 54 0 0 chr10 31465713 31465750 -114123538 + AT_rich Low_complexity Low_complexity 1 37 0 275 0 29 0 chr10 31466589 31466624 -114122664 + (TTTTG)n Simple_repeat Simple_repeat 1 36 0 2066 113 0 0 chr10 31466624 31466898 -114122390 - AluSx SINE Alu -33 279 6 207 0 0 0 chr10 31466963 31466986 -114122302 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 718 141 0 0 chr10 31467530 31467629 -114121659 + 5S rRNA rRNA 22 120 -1 403 177 0 149 chr10 31467630 31467645 -114121643 + FLAM_A SINE Alu 1 17 -285 2533 128 3 8 chr10 31467645 31468011 -114121277 + THE1B LTR MaLR 1 364 0 403 177 0 149 chr10 31468011 31468136 -114121152 + FLAM_A SINE Alu 17 120 -182 186 189 0 0 chr10 31468616 31468653 -114120635 + (TATATG)n Simple_repeat Simple_repeat 2 38 0 1647 181 31 10 chr10 31469323 31469616 -114119672 - AluJo SINE Alu -13 299 1 249 207 6 6 chr10 31469577 31469638 -114119650 - AluJ/monomer SINE Alu -262 38 1 462 248 207 15 chr10 31470736 31470934 -114118354 - MER102a DNA MER1_type -31 299 64 2298 79 34 0 chr10 31470934 31471226 -114118062 + AluSq SINE Alu 1 302 -11 690 219 133 91 chr10 31472071 31472524 -114116764 - MLT1L LTR MaLR -1 614 143 1584 192 10 19 chr10 31472586 31472899 -114116389 + AluJo SINE Alu 1 310 -2 332 325 31 0 chr10 31472910 31473073 -114116215 + L2 LINE L2 1684 1851 -1463 824 211 0 12 chr10 31473073 31473239 -114116049 + FRAM SINE Alu 1 164 -12 457 311 57 0 chr10 31473244 31473421 -114115867 + L2 LINE L2 1841 2027 -1287 185 260 280 20 chr10 31473489 31473639 -114115649 + L2 LINE L2 2137 2325 -989 1675 157 6 44 chr10 31473909 31474227 -114115061 + AluJo SINE Alu 1 306 -6 2437 93 3 0 chr10 31474317 31474627 -114114661 - AluY SINE Alu 0 311 1 1701 185 3 7 chr10 31476759 31477051 -114112237 + AluJb SINE Alu 6 296 -16 1973 141 0 4 chr10 31477439 31477715 -114111573 + AluSx SINE Alu 1 275 -37 378 0 0 0 chr10 31477717 31477759 -114111529 + (TA)n Simple_repeat Simple_repeat 2 43 0 242 300 0 0 chr10 31477899 31477959 -114111329 - MER81 DNA DNA -50 64 5 227 114 23 0 chr10 31478192 31478236 -114111052 + GA-rich Low_complexity Low_complexity 3 47 0 527 173 9 0 chr10 31478370 31478480 -114110808 + (CA)n Simple_repeat Simple_repeat 2 112 0 266 115 0 39 chr10 31478481 31478533 -114110755 - MER4-int LTR ERV1 -5436 1162 1113 192 158 0 0 chr10 31478534 31478572 -114110716 + (CA)n Simple_repeat Simple_repeat 1 38 0 303 226 0 24 chr10 31478573 31478632 -114110656 - L1MC4 LINE L1 -1339 6703 6645 1705 169 3 34 chr10 31478632 31478928 -114110360 + AluJb SINE Alu 1 287 -25 303 226 0 24 chr10 31478928 31478952 -114110336 - L1MC4 LINE L1 -1397 6645 6622 420 257 18 0 chr10 31479105 31479214 -114110074 + MER81 DNA DNA 4 114 0 2258 172 12 34 chr10 31479814 31480232 -114109056 + Tigger2a DNA MER2_type 26 434 0 210 118 0 0 chr10 31481620 31481654 -114107634 + (TG)n Simple_repeat Simple_repeat 2 35 0 1465 202 0 24 chr10 31482387 31482674 -114106614 + AluJo SINE Alu 1 280 -32 351 119 0 0 chr10 31533220 31533287 -114056001 + (TATG)n Simple_repeat Simple_repeat 2 68 0 710 246 87 5 chr10 31533926 31534133 -114055155 + MIR SINE MIR 5 228 -34 929 70 86 0 chr10 31534137 31534265 -114055023 + MER85 DNA T2_type 1 139 0 764 183 0 30 chr10 31534417 31534548 -114054740 + FLAM_C SINE Alu 3 129 -14 200 169 0 17 chr10 31534552 31534611 -114054677 + (TA)n Simple_repeat Simple_repeat 1 58 0 294 258 149 46 chr10 31534659 31534853 -114054435 - MIR SINE MIR 0 262 49 2613 47 0 0 chr10 31535697 31535996 -114053292 + AluY SINE Alu 1 299 -12 2083 112 21 0 chr10 31536906 31537192 -114052096 - AluSx SINE Alu -8 304 13 769 214 14 0 chr10 31537410 31537555 -114051733 - Tigger3(Golem) DNA MER2_type -2 3027 2881 2211 93 3 7 chr10 31537589 31537891 -114051397 - AluY SINE Alu -7 304 4 236 279 156 39 chr10 31538036 31538190 -114051098 + MER3 DNA MER1_type 2 126 -83 247 204 0 19 chr10 31538403 31538457 -114050831 + (CA)n Simple_repeat Simple_repeat 1 53 0 206 121 0 0 chr10 31541067 31541100 -114048188 + (TTTTTG)n Simple_repeat Simple_repeat 4 36 0 323 282 77 51 chr10 31541893 31542049 -114047239 + MER20B DNA MER1_type 5 164 -619 2312 95 0 16 chr10 31542188 31542493 -114046795 - AluSg SINE Alu -9 301 2 2280 122 0 3 chr10 31542922 31543233 -114046055 - AluSx SINE Alu -1 311 2 2290 106 0 0 chr10 31543646 31543947 -114045341 - AluSg SINE Alu -9 301 1 1107 83 0 0 chr10 31543947 31544080 -114045208 - AluSg SINE Alu -177 133 1 188 240 20 40 chr10 31545399 31545449 -114043839 - MIR SINE MIR -201 61 13 276 218 115 0 chr10 31545509 31545596 -114043692 - MER5A DNA MER1_type -84 105 9 1671 183 0 7 chr10 31547019 31547314 -114041974 + AluJo SINE Alu 5 297 -15 1337 218 200 43 chr10 31547787 31548248 -114041040 + MER50 LTR ERV1 10 592 -142 2019 93 72 0 chr10 31548248 31548526 -114040762 - AluSx SINE Alu -14 298 1 1337 218 200 43 chr10 31548526 31548674 -114040614 + MER50 LTR ERV1 592 715 -19 2329 155 96 26 chr10 31548732 31549230 -114040058 + L1MB3 LINE L1 5651 6183 0 2206 110 0 19 chr10 31550235 31550543 -114038745 - AluSx SINE Alu -10 302 1 920 204 6 12 chr10 31550859 31551031 -114038257 - FRAM SINE Alu -6 170 1 407 245 37 31 chr10 31551156 31551319 -114037969 + MER5B DNA MER1_type 2 165 -13 238 310 100 0 chr10 31552455 31552555 -114036733 + MIR SINE MIR 3 112 -150 22 0 0 0 chr10 31553498 31553520 -114035768 + AT_rich Low_complexity Low_complexity 1 22 0 2359 95 0 0 chr10 31553530 31553824 -114035464 + AluSq SINE Alu 1 294 -19 344 207 299 0 chr10 31554870 31554957 -114034331 + MER44D DNA MER2_type 1 383 -226 1763 140 0 73 chr10 31555036 31555350 -114033938 - AluSx SINE Alu -21 291 1 186 133 0 0 chr10 31555374 31555404 -114033884 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 1601 194 0 14 chr10 31555412 31555696 -114033592 - AluJo SINE Alu -32 280 1 764 116 20 62 chr10 31555696 31555842 -114033446 + MER44D DNA MER2_type 470 609 0 470 282 81 6 chr10 31555944 31556118 -114033170 - L1MC4a LINE L1 -1934 5874 5688 513 224 139 54 chr10 31556160 31556383 -114032905 - L1MC4a LINE L1 -2249 5559 5318 204 138 46 0 chr10 31556532 31556597 -114032691 + (TA)n Simple_repeat Simple_repeat 2 69 0 2115 123 7 0 chr10 31556736 31557036 -114032252 - AluSx SINE Alu -10 302 1 756 179 0 0 chr10 31557048 31557171 -114032117 - FLAM_C SINE Alu -19 124 2 506 283 23 40 chr10 31557174 31557527 -114031761 - L1MC5 LINE L1 -34 7927 7581 2182 133 0 0 chr10 31557581 31557882 -114031406 - AluSx SINE Alu -11 301 1 353 291 92 8 chr10 31557895 31558146 -114031142 - L1MC4a LINE L1 -1133 5013 4742 4869 185 139 103 chr10 31559140 31560834 -114028454 + MER52A LTR ERV1 1 1755 0 1732 138 112 4 chr10 31561277 31561545 -114027743 - AluSx SINE Alu -15 297 1 2230 109 10 3 chr10 31563720 31564022 -114025266 + AluSc SINE Alu 1 304 -5 206 276 66 0 chr10 31564068 31564144 -114025144 - MER5A DNA MER1_type -57 132 52 180 0 0 0 chr10 31564156 31564176 -114025112 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1524 161 36 29 chr10 31564181 31564455 -114024833 - AluJo SINE Alu -36 276 1 471 357 23 23 chr10 31564755 31565021 -114024267 - HAL1 LINE L1 -1260 1247 982 2288 82 36 13 chr10 31565206 31565511 -114023777 - AluSq SINE Alu -1 312 1 2175 78 3 7 chr10 31565591 31565874 -114023414 - AluY SINE Alu -29 282 1 592 266 111 24 chr10 31565916 31566123 -114023165 + MIR SINE MIR 38 262 0 7144 90 18 2 chr10 31566350 31567792 -114021496 + L1PA8A LINE L1 4293 5756 -375 3754 90 2 10 chr10 31567845 31568366 -114020922 + L1PA10 LINE L1 5642 6158 -10 985 178 37 5 chr10 31568399 31568590 -114020698 - MLT1D LTR MaLR -308 197 1 639 147 0 0 chr10 31569318 31569413 -114019875 + FLAM_C SINE Alu 31 125 -18 1657 155 11 11 chr10 31569747 31570025 -114019263 + AluJo SINE Alu 1 278 -34 2451 82 0 3 chr10 31571651 31571957 -114017331 - AluSx SINE Alu -7 305 1 327 176 47 47 chr10 31572399 31572484 -114016804 - MLT1K LTR MaLR -39 549 465 2484 74 0 10 chr10 31573076 31573385 -114015903 + AluY SINE Alu 1 306 -5 2179 117 10 7 chr10 31574245 31574554 -114014734 + AluSx SINE Alu 1 310 -2 1072 146 6 0 chr10 31574559 31574717 -114014571 + FRAM SINE Alu 4 162 -14 208 0 62 0 chr10 31575168 31575200 -114014088 + (TTTTTA)n Simple_repeat Simple_repeat 2 35 0 6461 72 25 55 chr10 31576039 31577018 -114012270 - SVA Other Other -4 1382 433 5747 82 20 53 chr10 31577033 31577927 -114011361 - SVA Other Other -520 866 2 190 111 0 37 chr10 31577928 31577982 -114011306 + (GGGAGA)n Simple_repeat Simple_repeat 1 52 0 2269 106 7 0 chr10 31578124 31578425 -114010863 - AluSx SINE Alu -7 305 3 900 102 6 113 chr10 31578438 31578615 -114010673 - L1PB3 LINE L1 -1 6153 5996 1859 153 46 0 chr10 31579144 31579425 -114009863 + AluSx SINE Alu 1 294 -18 1283 142 52 78 chr10 31579478 31579746 -114009542 - AluJo SINE Alu -19 293 33 351 119 0 0 chr10 31579903 31579970 -114009318 + (TATG)n Simple_repeat Simple_repeat 2 68 0 710 246 87 5 chr10 31580609 31580816 -114008472 + MIR SINE MIR 5 228 -34 929 70 86 0 chr10 31580820 31580948 -114008340 + MER85 DNA T2_type 1 139 0 764 183 0 30 chr10 31581100 31581231 -114008057 + FLAM_C SINE Alu 3 129 -14 200 169 0 17 chr10 31581235 31581294 -114007994 + (TA)n Simple_repeat Simple_repeat 1 58 0 294 258 149 46 chr10 31581342 31581536 -114007752 - MIR SINE MIR 0 262 49 2651 40 0 0 chr10 31582380 31582678 -114006610 + AluY SINE Alu 1 298 -13 38 22 0 0 chr10 31583257 31583302 -114005986 + AT_rich Low_complexity Low_complexity 1 45 0 2324 98 0 3 chr10 31584307 31584612 -114004676 + AluSg SINE Alu 1 304 -6 437 259 136 7 chr10 31584621 31584768 -114004520 + MIR3 SINE MIR 37 202 -6 3666 115 72 36 chr10 31585982 31586197 -114003091 - LTR34 LTR ERV1 0 699 493 1675 151 70 7 chr10 31586197 31586481 -114002807 - AluSx SINE Alu -10 302 1 3666 115 72 36 chr10 31586481 31586927 -114002361 - LTR34 LTR ERV1 -206 493 14 370 256 78 23 chr10 31587855 31587984 -114001304 + L3 LINE CR1 1321 1456 -121 1102 113 40 17 chr10 31587989 31588166 -114001122 + MER4D LTR ERV1 1 181 -722 5352 124 12 10 chr10 31588166 31588972 -114000316 + L1PA15 LINE L1 5350 6157 -8 3355 142 65 73 chr10 31588972 31589668 -113999620 + MER4D LTR ERV1 183 872 0 3151 120 8 112 chr10 31590283 31590924 -113998364 + MER4B LTR ERV1 1 574 -36 479 237 0 52 chr10 31591362 31591497 -113997791 + L2 LINE L2 3180 3307 -6 200 182 0 0 chr10 31592404 31592437 -113996851 + CT-rich Low_complexity Low_complexity 2 34 0 393 22 0 0 chr10 31592440 31592486 -113996802 + (CA)n Simple_repeat Simple_repeat 2 47 0 2367 112 0 0 chr10 31592952 31593256 -113996032 - AluSx SINE Alu -8 304 1 181 296 57 23 chr10 31593495 31593583 -113995705 + L2 LINE L2 2954 3044 -228 1637 179 14 21 chr10 31593707 31593992 -113995296 - AluJo SINE Alu -29 283 1 391 169 48 0 chr10 31593997 31594080 -113995208 - L1PA16 LINE L1 -1 6165 6079 1052 156 0 11 chr10 31594170 31594349 -113994939 + AluJb SINE Alu 134 310 -2 206 31 0 31 chr10 31594661 31594693 -113994595 + (TTTG)n Simple_repeat Simple_repeat 4 34 0 2111 111 4 0 chr10 31594693 31594972 -113994316 - AluSx SINE Alu -32 280 1 3724 111 23 6 chr10 31595317 31595832 -113993456 + MER1A DNA MER1_type 4 527 0 1604 152 17 52 chr10 31596176 31596465 -113992823 + AluJo SINE Alu 2 280 -32 3422 105 8 10 chr10 31597587 31598081 -113991207 - LOR1a LTR ERV1 0 497 5 1375 225 37 34 chr10 31598379 31598677 -113990611 - AluJo SINE Alu -2 300 2 2043 185 50 46 chr10 31598772 31599275 -113990013 + MLT1D LTR MaLR 1 505 0 206 266 78 0 chr10 31599429 31599493 -113989795 + L2 LINE L2 3208 3276 -37 1733 170 17 17 chr10 31599558 31599847 -113989441 - AluJb SINE Alu -23 289 1 1785 121 83 78 chr10 31600091 31600290 -113988998 + THE1C LTR MaLR 1 204 -171 225 0 0 0 chr10 31600290 31600315 -113988973 + (TC)n Simple_repeat Simple_repeat 1 25 0 1785 121 83 78 chr10 31600315 31600488 -113988800 + THE1C LTR MaLR 204 375 0 2079 128 0 0 chr10 31600682 31600995 -113988293 + AluSx SINE Alu 1 313 0 244 360 84 27 chr10 31600997 31601258 -113988030 - L2 LINE L2 -20 3252 2977 209 280 20 0 chr10 31601258 31601308 -113987980 - L2 LINE L2 -12 3260 3210 22 0 0 0 chr10 31601316 31601338 -113987950 + AT_rich Low_complexity Low_complexity 1 22 0 694 169 8 0 chr10 31601393 31601511 -113987777 - AluJb SINE Alu -1 311 193 1042 245 32 0 chr10 31601566 31601782 -113987506 - MER58A DNA MER1_type -1 223 1 1834 178 3 3 chr10 31603755 31604059 -113985229 - AluJo SINE Alu -7 305 2 734 282 61 69 chr10 31604204 31604946 -113984342 + L2 LINE L2 2539 3283 -30 2277 115 0 0 chr10 31605119 31605414 -113983874 + AluSx SINE Alu 1 295 -17 380 127 0 0 chr10 31605638 31605693 -113983595 - Alu SINE Alu -6 296 242 2088 221 74 46 chr10 31605966 31606022 -113983266 - L1ME1 LINE L1 -5 6161 6108 1709 183 7 17 chr10 31606022 31606323 -113982965 - AluJo SINE Alu -14 298 1 2088 221 74 46 chr10 31606323 31606917 -113982371 - L1ME1 LINE L1 -58 6108 5493 662 62 0 0 chr10 31606919 31607000 -113982288 - THE1B LTR MaLR 0 364 284 474 54 0 0 chr10 31607000 31607056 -113982232 - THE1B LTR MaLR -308 56 1 1249 165 0 19 chr10 31607673 31607879 -113981409 + AluJb SINE Alu 1 202 -110 2291 85 3 0 chr10 31608066 31608379 -113980909 - AluY SINE Alu 0 314 1 1703 139 68 25 chr10 31608641 31608922 -113980366 - AluJo SINE Alu -6 306 14 243 229 0 0 chr10 31609155 31609216 -113980072 + (TATG)n Simple_repeat Simple_repeat 3 63 0 1791 102 124 0 chr10 31610241 31610506 -113978782 + AluSx SINE Alu 5 302 0 1935 144 0 7 chr10 31610780 31611064 -113978224 - AluJo SINE Alu -30 282 1 216 0 0 0 chr10 31611092 31611116 -113978172 + (TG)n Simple_repeat Simple_repeat 2 25 0 191 303 0 15 chr10 31611612 31611678 -113977610 - L2 LINE L2 -214 3058 2994 804 172 0 8 chr10 31611931 31612065 -113977223 + FLAM_C SINE Alu 1 133 0 2367 94 0 0 chr10 31612710 31613008 -113976280 - AluSc SINE Alu -11 298 1 1707 168 18 4 chr10 31613291 31613565 -113975723 - AluJb SINE Alu -34 278 1 1626 178 34 20 chr10 31613565 31613858 -113975430 - AluJo SINE Alu -15 297 1 1673 186 10 10 chr10 31615113 31615420 -113973868 - AluJb SINE Alu -5 307 1 183 143 29 0 chr10 31616371 31616406 -113972882 + MER5A DNA MER1_type 1 36 -153 215 269 104 0 chr10 31616606 31616673 -113972615 - L2 LINE L2 -1 3312 3239 521 278 44 28 chr10 31616751 31616931 -113972357 + MIR SINE MIR 6 188 -74 2401 156 44 29 chr10 31617011 31617465 -113971823 - LOR1b LTR ERV1 0 461 1 898 180 4 146 chr10 31617656 31617726 -113971562 + L1MB8 LINE L1 3909 3987 -2159 2025 114 40 3 chr10 31617726 31618024 -113971264 + AluSc SINE Alu 1 309 0 898 180 4 146 chr10 31618024 31618199 -113971089 + L1MB8 LINE L1 3987 4119 -2027 2815 178 34 38 chr10 31618199 31618222 -113971066 + MLT2B3 LTR ERVL 1 23 -531 2270 180 36 79 chr10 31618222 31618801 -113970487 + MLT2B3 LTR ERVL 1 554 0 2815 178 34 38 chr10 31618801 31619333 -113969955 + MLT2B3 LTR ERVL 23 554 0 4566 192 56 37 chr10 31619335 31620389 -113968899 + L1MB8 LINE L1 4117 5149 -1029 2193 134 132 5 chr10 31620389 31620769 -113968519 - MSTA LTR MaLR 0 428 1 786 139 23 8 chr10 31620769 31620898 -113968390 + FLAM_C SINE Alu 1 131 -2 4566 192 56 37 chr10 31620898 31621855 -113967433 + L1MB8 LINE L1 5148 6165 -13 255 31 0 0 chr10 31621860 31621892 -113967396 + (TG)n Simple_repeat Simple_repeat 2 33 0 568 284 209 48 chr10 31621918 31622249 -113967039 - L2 LINE L2 -799 2515 2239 315 0 0 0 chr10 31622249 31622284 -113967004 + (GA)n Simple_repeat Simple_repeat 2 36 0 568 284 209 48 chr10 31622284 31622597 -113966691 - L2 LINE L2 -1075 2239 1767 1085 195 108 16 chr10 31622968 31623222 -113966066 - AluJo SINE Alu -25 287 14 2172 172 34 3 chr10 31623754 31624138 -113965150 - MSTD LTR MaLR 0 396 1 1453 169 0 69 chr10 31624726 31625045 -113964243 - AluJo SINE Alu -15 297 1 183 42 0 0 chr10 31625760 31625784 -113963504 + (T)n Simple_repeat Simple_repeat 1 24 0 237 33 0 0 chr10 31626101 31626131 -113963157 + (CA)n Simple_repeat Simple_repeat 2 31 0 228 163 0 0 chr10 31626409 31626452 -113962836 + A-rich Low_complexity Low_complexity 1 43 0 466 217 104 26 chr10 31627623 31627738 -113961550 - L2 LINE L2 -2 3311 3188 2019 138 0 0 chr10 31628157 31628468 -113960820 - AluSx SINE Alu -1 311 1 694 175 0 0 chr10 31629054 31629174 -113960114 - AluSg/x SINE Alu 0 312 193 2014 135 0 7 chr10 31630769 31631073 -113958215 + AluSx SINE Alu 1 302 -10 1915 125 25 0 chr10 31631212 31631568 -113957720 - AluSx SINE Alu 0 363 1 1893 114 11 0 chr10 31632079 31632396 -113956892 - AluSq SINE Alu 0 320 1 777 138 31 15 chr10 31632429 31632559 -113956729 - FLAM_C SINE Alu -1 132 1 24 32 0 0 chr10 31632622 31632653 -113956635 + AT_rich Low_complexity Low_complexity 1 31 0 2121 111 10 0 chr10 31633918 31634215 -113955073 + AluSq SINE Alu 1 300 -13 2108 119 3 0 chr10 31634216 31634519 -113954769 + AluSc SINE Alu 1 304 -5 647 233 0 0 chr10 31634596 31634729 -113954559 + FLAM_A SINE Alu 6 138 -4 2108 100 0 13 chr10 31635205 31635505 -113953783 - AluSq SINE Alu -17 296 1 1388 204 74 9 chr10 31635505 31635821 -113953467 - L1MD1 LINE L1 -7 6235 5896 2147 135 28 38 chr10 31636194 31636232 -113953056 - L1MC1 LINE L1 -15 6318 6281 1855 173 0 0 chr10 31636232 31636538 -113952750 + AluJb SINE Alu 1 306 -6 2147 135 28 38 chr10 31636538 31636756 -113952532 - L1MC1 LINE L1 -52 6281 6065 1584 165 71 9 chr10 31636756 31637096 -113952192 - MER46B DNA MER2_type 0 236 1 2147 135 28 38 chr10 31637096 31637230 -113952058 - L1MC1 LINE L1 -268 6065 5931 2014 138 0 3 chr10 31638815 31639120 -113950168 - AluSx SINE Alu -8 304 1 443 195 195 0 chr10 31639956 31640079 -113949209 + L2 LINE L2 3167 3313 0 2185 80 3 3 chr10 31640912 31641201 -113948087 - AluSg1 SINE Alu -20 289 1 1022 188 92 98 chr10 31641993 31642460 -113946828 - MER4C LTR ERV1 0 465 2 2604 96 14 3 chr10 31644032 31644396 -113944892 - L1PA13 LINE L1 -2 6161 5794 471 114 0 0 chr10 31644714 31644793 -113944495 + L1MA5A LINE L1 6214 6292 -5 1349 184 25 22 chr10 31645602 31645726 -113943562 + AluJb SINE Alu 4 126 -186 1506 186 72 0 chr10 31645726 31646017 -113943271 + AluJb SINE Alu 1 312 0 1349 184 25 22 chr10 31646017 31646169 -113943119 + AluJb SINE Alu 126 281 -31 2253 174 22 26 chr10 31646381 31646840 -113942448 - LTR32 LTR ERVL 0 471 15 1948 131 0 7 chr10 31647488 31647785 -113941503 + AluJb SINE Alu 1 295 -17 1587 160 29 11 chr10 31648314 31648634 -113940654 - AluJo SINE Alu 0 327 3 2219 138 25 30 chr10 31648839 31649238 -113940050 - L1MB4 LINE L1 -2 6178 5782 1539 129 75 0 chr10 31650152 31650407 -113938881 + AluJb SINE Alu 11 284 -28 201 39 0 0 chr10 31650407 31650433 -113938855 + (CATA)n Simple_repeat Simple_repeat 2 27 0 1459 155 3 73 chr10 31650732 31651035 -113938253 - AluJo SINE Alu -22 290 9 2186 71 0 4 chr10 31651609 31651934 -113937354 - AluY SINE Alu 0 324 1 192 310 0 0 chr10 31652314 31652372 -113936916 - L2 LINE L2 0 3272 3215 497 213 86 75 chr10 31652612 31652786 -113936502 - MLT1C LTR MaLR -285 182 7 1954 128 3 0 chr10 31652842 31653132 -113936156 - AluSx SINE Alu -21 291 1 1488 172 8 11 chr10 31653447 31653709 -113935579 + AluJo SINE Alu 13 273 -39 1095 74 0 29 chr10 31653714 31653889 -113935399 + (GAAA)n Simple_repeat Simple_repeat 3 172 0 535 241 47 47 chr10 31653924 31654094 -113935194 - MIR SINE MIR 0 262 93 1926 39 9 0 chr10 31654645 31654875 -113934413 + AluY SINE Alu 66 297 -14 1383 195 18 18 chr10 31654889 31655205 -113934083 + AluJo SINE Alu 1 316 0 243 88 0 0 chr10 31655653 31655687 -113933601 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 2112 136 0 0 chr10 31655749 31656059 -113933229 - AluSx SINE Alu -2 310 1 1551 260 63 5 chr10 31656335 31656750 -113932538 + LTR16C LTR ERVL 53 491 0 519 45 0 0 chr10 31657127 31657193 -113932095 + (TC)n Simple_repeat Simple_repeat 1 66 0 1569 160 167 14 chr10 31657621 31657915 -113931373 + MER1B DNA MER1_type 1 339 0 2040 115 0 10 chr10 31658125 31658429 -113930859 - AluSc SINE Alu -8 301 1 1576 178 3 23 chr10 31659104 31659407 -113929881 + AluJo SINE Alu 6 302 -10 1939 132 0 11 chr10 31659428 31659782 -113929506 - AluSx SINE Alu 0 351 1 7629 36 1 0 chr10 31660115 31661032 -113928256 + L1PA5 LINE L1 5232 6149 -5 2739 112 13 74 chr10 31661348 31661502 -113927786 - MER65A LTR ERV1 0 445 283 2027 108 0 3 chr10 31661502 31661789 -113927499 - AluSg SINE Alu -3 307 22 2739 112 13 74 chr10 31661789 31662108 -113927180 - MER65A LTR ERV1 -162 283 1 301 203 76 25 chr10 31662381 31662460 -113926828 - L1MC4 LINE L1 0 8042 7960 549 288 63 66 chr10 31662493 31663028 -113926260 - L1MC4 LINE L1 -69 7973 7334 600 275 122 13 chr10 31663776 31664005 -113925283 - MIR SINE MIR -8 254 1 370 270 70 50 chr10 31664908 31664938 -113924350 + L1MC4a LINE L1 5407 5435 -686 2100 132 0 0 chr10 31664938 31665249 -113924039 + AluSq SINE Alu 1 311 -2 370 270 70 50 chr10 31665249 31665377 -113923911 + L1MC4a LINE L1 5435 5559 -562 1658 170 3 3 chr10 31665377 31665665 -113923623 + AluJb SINE Alu 1 288 -24 370 270 70 50 chr10 31665665 31665856 -113923432 + L1MC4a LINE L1 5559 5745 -376 1945 119 6 10 chr10 31665856 31666167 -113923121 + AluSx SINE Alu 1 310 -2 370 270 70 50 chr10 31666167 31666444 -113922844 + L1MC4a LINE L1 5745 6110 -11 2126 96 20 0 chr10 31667128 31667421 -113921867 + AluSq SINE Alu 1 299 -14 1967 120 30 13 chr10 31667503 31667802 -113921486 - AluSg SINE Alu -6 304 1 2642 144 76 11 chr10 31667882 31668340 -113920948 + LTR45B LTR ERV1 2 489 0 204 97 0 0 chr10 31668348 31668379 -113920909 + (TATG)n Simple_repeat Simple_repeat 2 32 0 1732 160 0 3 chr10 31668381 31668669 -113920619 - AluSx SINE Alu -25 287 1 2025 112 3 0 chr10 31668934 31669221 -113920067 + AluSx SINE Alu 1 288 -24 1023 133 0 0 chr10 31669222 31669395 -113919893 + AluSq SINE Alu 133 305 0 1577 133 16 67 chr10 31669972 31670287 -113919001 - AluSx SINE Alu -13 299 1 369 264 104 8 chr10 31670356 31670481 -113918807 + MIR SINE MIR 66 202 -60 1048 236 77 60 chr10 31670486 31670875 -113918413 + MLT1C LTR MaLR 6 387 -239 1416 176 64 0 chr10 31670875 31671027 -113918261 - AluJo SINE Alu -28 284 143 389 36 0 18 chr10 31671027 31671083 -113918205 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 2166 64 0 0 chr10 31671086 31671351 -113917937 - AluSc SINE Alu -32 277 13 1416 176 64 0 chr10 31671351 31671461 -113917827 - AluJo SINE Alu -170 142 1 1048 236 77 60 chr10 31671461 31671573 -113917715 + MLT1C LTR MaLR 387 626 0 208 358 38 67 chr10 31671892 31672238 -113917050 - L2 LINE L2 -12 3260 2925 1209 164 91 46 chr10 31673061 31673324 -113915964 + AluJo SINE Alu 19 293 -19 2527 193 71 47 chr10 31673324 31673968 -113915320 - L1ME1 LINE L1 -51 6115 5488 5120 117 23 12 chr10 31673968 31674738 -113914550 - MER4E LTR ERV1 0 779 1 2527 193 71 47 chr10 31674738 31674862 -113914426 - L1ME1 LINE L1 -678 5488 5368 2353 80 17 3 chr10 31674862 31675163 -113914125 - AluSg SINE Alu -5 305 1 2527 193 71 47 chr10 31675163 31675261 -113914027 - L1ME1 LINE L1 -798 5368 5225 1048 212 28 25 chr10 31675273 31675629 -113913659 - L1ME1 LINE L1 -1227 4919 4362 319 41 41 0 chr10 31675961 31676010 -113913278 + (GAAA)n Simple_repeat Simple_repeat 1 51 0 725 179 8 0 chr10 31676869 31676986 -113912302 + FLAM_C SINE Alu 7 124 -19 272 83 21 0 chr10 31676986 31677034 -113912254 + (TTTTG)n Simple_repeat Simple_repeat 3 51 0 750 163 77 61 chr10 31677034 31677280 -113912008 + LTR56 LTR ERV1 76 325 -120 698 162 68 16 chr10 31677435 31677626 -113911662 - L1ME1 LINE L1 -2130 4016 3816 387 173 67 0 chr10 31677688 31677763 -113911525 + LTR23 LTR ERV1 358 437 0 187 315 0 0 chr10 31677769 31677823 -113911465 + L2 LINE L2 2992 3045 -227 446 360 67 27 chr10 31677981 31678575 -113910713 + L2 LINE L2 2238 2855 -459 3382 197 94 22 chr10 31678621 31679475 -113909813 - L1MC4a LINE L1 -3 7805 6891 233 279 11 142 chr10 31679518 31679708 -113909580 + L2 LINE L2 2931 3095 -177 1613 187 64 124 chr10 31680817 31681367 -113907921 - LTR40a LTR ERVL 0 519 3 183 256 0 0 chr10 31681687 31681726 -113907562 + MIR SINE MIR 220 258 -4 797 239 201 26 chr10 31681726 31682074 -113907214 - MLT1I LTR MaLR 0 409 1 1651 187 0 21 chr10 31682107 31682396 -113906892 + AluJb SINE Alu 14 296 -16 258 32 0 0 chr10 31682396 31682427 -113906861 + (TA)n Simple_repeat Simple_repeat 1 31 0 378 0 0 0 chr10 31682732 31682774 -113906514 + (CA)n Simple_repeat Simple_repeat 1 42 0 2343 82 3 35 chr10 31682840 31683155 -113906133 + AluSq SINE Alu 1 305 -8 2867 16 0 0 chr10 31684145 31684456 -113904832 - AluYa5 SINE Alu 0 311 1 223 303 34 34 chr10 31684565 31684684 -113904604 + L3b LINE CR1 1249 1367 -216 2323 113 0 0 chr10 31685017 31685328 -113903960 - AluSx SINE Alu -1 311 1 2357 113 0 0 chr10 31685559 31685870 -113903418 + AluSx SINE Alu 1 311 -1 274 297 187 0 chr10 31686282 31686437 -113902851 - MIR SINE MIR 0 262 79 1847 153 39 0 chr10 31686583 31686864 -113902424 + AluJo SINE Alu 1 292 -20 2352 121 0 0 chr10 31687350 31687663 -113901625 + AluSq SINE Alu 1 313 0 1702 161 61 84 chr10 31687685 31688127 -113901161 - MSTB1 LTR MaLR 0 432 1 22 0 0 0 chr10 31688498 31688520 -113900768 + AT_rich Low_complexity Low_complexity 1 22 0 25 0 0 0 chr10 31688551 31688576 -113900712 + AT_rich Low_complexity Low_complexity 1 25 0 472 191 0 187 chr10 31689438 31689567 -113899721 + MER112 DNA MER1_type 17 78 -182 552 186 124 0 chr10 31689567 31689680 -113899608 - FLAM_A SINE Alu -5 128 2 472 191 0 187 chr10 31689680 31689801 -113899487 + MER112 DNA MER1_type 78 220 -40 607 206 8 0 chr10 31690944 31691075 -113898213 + FLAM_C SINE Alu 2 133 0 2621 58 0 0 chr10 31691678 31691989 -113897299 - AluY SINE Alu 0 311 1 1343 105 89 189 chr10 31692037 31692454 -113896834 + MLT1B LTR MaLR 2 384 -12 188 235 29 44 chr10 31692636 31692704 -113896584 - MER5A DNA MER1_type -7 182 116 * 491 198 43 56 chr10 31692648 31692810 -113896478 + MER5A DNA MER1_type 30 189 0 268 174 0 0 chr10 31695631 31695677 -113893611 - MIR SINE MIR -113 149 104 491 247 64 89 chr10 31696424 31696537 -113892751 + MIR SINE MIR 32 137 -125 1663 149 71 4 chr10 31696537 31696818 -113892470 + AluJo SINE Alu 1 300 -12 491 247 64 89 chr10 31696818 31696939 -113892349 + MIR SINE MIR 137 260 -2 188 235 39 0 chr10 31699656 31699707 -113889581 - MIR SINE MIR -116 146 94 1728 141 67 30 chr10 31699938 31700235 -113889053 - AluJo SINE Alu -4 308 1 2454 98 0 0 chr10 31700281 31700588 -113888700 - AluSg SINE Alu -3 307 1 485 32 16 0 chr10 31700628 31700691 -113888597 + (CA)n Simple_repeat Simple_repeat 2 65 0 732 179 8 0 chr10 31702710 31702833 -113886455 + FRAM SINE Alu 1 119 -57 204 137 98 59 chr10 31703169 31703220 -113886068 - L2 LINE L2 -96 3217 3165 2235 106 0 0 chr10 31703385 31703677 -113885611 - AluSx SINE Alu -20 292 1 1913 164 0 0 chr10 31703920 31704207 -113885081 + AluJo SINE Alu 1 287 -25 23 0 0 0 chr10 31704207 31704230 -113885058 + AT_rich Low_complexity Low_complexity 1 23 0 2284 108 0 22 chr10 31705088 31705402 -113883886 - AluSx SINE Alu -5 307 1 294 29 0 0 chr10 31705736 31705771 -113883517 + (TG)n Simple_repeat Simple_repeat 2 36 0 27 0 0 0 chr10 31706563 31706590 -113882698 + AT_rich Low_complexity Low_complexity 1 27 0 1296 170 59 95 chr10 31706744 31707050 -113882238 - AluJo SINE Alu -12 300 6 504 292 54 13 chr10 31707060 31707293 -113881995 - MIR SINE MIR -10 252 10 2119 114 50 3 chr10 31707890 31708188 -113881100 - AluSx SINE Alu 0 312 1 2568 213 64 86 chr10 31708385 31708876 -113880412 - L1MEc LINE L1 -3616 2599 2099 207 69 0 0 chr10 31708876 31708905 -113880383 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 2568 213 64 86 chr10 31708905 31708997 -113880291 - L1MEc LINE L1 -4116 2099 2007 1922 155 3 3 chr10 31708997 31709287 -113880001 + AluSx SINE Alu 3 292 -20 2568 213 64 86 chr10 31709287 31709922 -113879366 - L1MEc LINE L1 -4208 2007 1454 926 183 29 17 chr10 31709925 31710100 -113879188 - AluJo SINE Alu -18 294 118 1162 220 65 21 chr10 31710100 31710528 -113878760 - L1MEc LINE L1 -4954 1442 996 1625 228 132 32 chr10 31710547 31710832 -113878456 - L1MEc LINE L1 -5471 925 670 852 100 77 8 chr10 31710832 31710962 -113878326 - MER85 DNA T2_type 0 139 1 1625 228 132 32 chr10 31710962 31711006 -113878282 - L1MEc LINE L1 -5726 670 632 2129 142 7 0 chr10 31711006 31711315 -113877973 - AluSx SINE Alu -1 311 1 1625 228 132 32 chr10 31711315 31711551 -113877737 - L1MEc LINE L1 -5764 632 302 304 270 70 10 chr10 31711606 31711706 -113877582 - MER5A DNA MER1_type -80 109 4 4735 167 36 39 chr10 31711717 31711804 -113877484 - Charlie5 DNA MER1_type -6 2618 2532 2387 78 0 3 chr10 31711804 31712098 -113877190 - AluSc SINE Alu -16 293 1 4735 167 36 39 chr10 31712098 31712884 -113876404 - Charlie5 DNA MER1_type -92 2532 1747 2289 109 10 19 chr10 31712884 31713197 -113876091 - AluY SINE Alu -1 310 1 4735 167 36 39 chr10 31713197 31713390 -113875898 - Charlie5 DNA MER1_type -877 1747 1555 3172 194 63 57 chr10 31713393 31714294 -113874994 - Charlie5 DNA MER1_type -1705 907 1 1831 141 57 10 chr10 31715172 31715470 -113873818 - AluJb SINE Alu 0 312 1 374 277 27 9 chr10 31715985 31716097 -113873191 + MIR3 SINE MIR 49 162 -46 456 239 58 19 chr10 31716171 31716326 -113872962 - MER103 DNA DNA -3 163 3 1012 195 41 32 chr10 31716406 31716627 -113872661 + MER58A DNA MER1_type 1 223 -1 264 59 0 0 chr10 31716850 31716884 -113872404 + (CA)n Simple_repeat Simple_repeat 1 34 0 2284 105 10 7 chr10 31716946 31717252 -113872036 - AluSx SINE Alu -5 307 1 257 277 14 78 chr10 31717331 31717472 -113871816 - HAL1b LINE L1 -474 874 743 2129 141 47 81 chr10 31717509 31717956 -113871332 - MSTB1 LTR MaLR 0 432 1 42 0 0 0 chr10 31718096 31718138 -113871150 + AT_rich Low_complexity Low_complexity 1 42 0 582 119 0 69 chr10 31718138 31718239 -113871049 - U6 snRNA snRNA 0 107 14 440 127 0 0 chr10 31718239 31718302 -113870986 - AluS SINE Alu -255 63 1 2140 109 3 7 chr10 31718368 31718653 -113870635 - AluSx SINE Alu -13 299 16 2030 133 0 0 chr10 31718732 31719018 -113870270 - AluSx SINE Alu -16 296 11 24 0 0 0 chr10 31719302 31719326 -113869962 + AT_rich Low_complexity Low_complexity 1 24 0 761 233 112 109 chr10 31719681 31719789 -113869499 - LTR41 LTR ERVL -25 748 642 1911 140 27 10 chr10 31719789 31720081 -113869207 + AluJo SINE Alu 1 297 -15 761 233 112 109 chr10 31720081 31720716 -113868572 - LTR41 LTR ERVL -131 642 3 306 280 37 63 chr10 31720736 31720767 -113868521 - HAL1 LINE L1 -1185 1322 1292 1401 154 30 21 chr10 31720767 31721001 -113868287 + MER46A DNA MER2_type 1 236 0 306 280 37 63 chr10 31721001 31721319 -113867969 - HAL1 LINE L1 -1215 1292 982 1764 148 36 13 chr10 31721504 31721809 -113867479 - AluSq SINE Alu -1 312 1 2814 20 0 0 chr10 31721867 31722171 -113867117 - AluY SINE Alu -7 304 1 318 220 0 0 chr10 31722209 31722309 -113866979 + (TG)n Simple_repeat Simple_repeat 1 100 0 823 121 0 0 chr10 31723055 31723171 -113866117 + FLAM_C SINE Alu 20 135 -8 21 57 0 0 chr10 31723178 31723213 -113866075 + AT_rich Low_complexity Low_complexity 1 35 0 1343 279 22 106 chr10 31723225 31723547 -113865741 + AluSc SINE Alu 3 297 -12 311 205 17 17 chr10 31723818 31723935 -113865353 + T-rich Low_complexity Low_complexity 3 119 0 22 35 0 0 chr10 31724099 31724128 -113865160 + AT_rich Low_complexity Low_complexity 1 29 0 1009 179 0 6 chr10 31725283 31725451 -113863837 + FRAM SINE Alu 1 160 -16 1351 107 5 5 chr10 31726564 31726760 -113862528 - AluSg/x SINE Alu 0 312 117 320 184 37 118 chr10 31726814 31726950 -113862338 - LTR48 LTR ERV1 -9 778 654 1069 156 0 33 chr10 31727078 31727289 -113861999 + AluSc SINE Alu 91 294 -15 371 206 127 26 chr10 31727297 31727464 -113861824 - MER34 LTR ERV1 -348 237 1 1413 156 5 0 chr10 31727676 31727888 -113861400 + AluSx SINE Alu 1 213 -99 602 322 31 4 chr10 31728913 31729140 -113860148 + MIR SINE MIR 28 260 -2 4518 49 7 0 chr10 31729197 31729748 -113859540 - L1PA7 LINE L1 -4 6150 5596 180 0 0 0 chr10 31729980 31730000 -113859288 + (CAT)n Simple_repeat Simple_repeat 2 21 0 395 294 14 46 chr10 31730104 31730322 -113858966 + L1MC5 LINE L1 7010 7220 -741 511 298 57 20 chr10 31730456 31730805 -113858483 + L1MC5 LINE L1 7272 7633 -328 420 147 0 0 chr10 31730844 31730912 -113858376 - MIR SINE MIR -174 88 21 233 188 62 31 chr10 31730930 31730994 -113858294 + MIR SINE MIR 124 189 -73 229 315 34 0 chr10 31731657 31731746 -113857542 + L1MC4 LINE L1 7781 7872 -170 1572 193 7 10 chr10 31731833 31732129 -113857159 + AluJo SINE Alu 13 307 -5 349 326 49 21 chr10 31732564 31732708 -113856580 + MLT1I LTR MaLR 9 156 -253 679 150 32 0 chr10 31732792 31733052 -113856236 + CT-rich Low_complexity Low_complexity 1 268 0 267 122 41 0 chr10 31733055 31733104 -113856184 + MLT1I LTR MaLR 345 395 -14 614 279 14 19 chr10 31733243 31733451 -113855837 - MIR SINE MIR -55 207 1 447 308 27 0 chr10 31733975 31734121 -113855167 - MIR SINE MIR -75 187 38 1698 159 16 29 chr10 31734659 31734887 -113854401 + AluJo SINE Alu 1 230 -82 2375 115 62 3 chr10 31734887 31735243 -113854045 - MER51B LTR ERV1 0 377 1 1698 159 16 29 chr10 31735243 31735312 -113853976 + AluJo SINE Alu 230 296 -16 2684 48 0 0 chr10 31735312 31735621 -113853667 + AluY SINE Alu 1 309 -2 1698 159 16 29 chr10 31735621 31735637 -113853651 + AluJo SINE Alu 296 311 -1 23 0 0 0 chr10 31736230 31736253 -113853035 + AT_rich Low_complexity Low_complexity 1 23 0 358 277 28 68 chr10 31736255 31736432 -113852856 - L1MC5 LINE L1 -48 7913 7744 2077 95 81 0 chr10 31737255 31737539 -113851749 + AluSq SINE Alu 1 307 -6 8803 200 58 36 chr10 31738155 31738427 -113850861 + L1MDa LINE L1 25 289 -6251 857 122 0 30 chr10 31738427 31738558 -113850730 + FLAM_C SINE Alu 5 131 -2 8803 200 58 36 chr10 31738558 31740286 -113849002 + L1MDa LINE L1 289 2253 -4287 1536 200 3 32 chr10 31740286 31740601 -113848687 + AluJo SINE Alu 2 307 -5 8803 200 58 36 chr10 31740601 31741326 -113847962 + L1MDa LINE L1 2253 2960 -3580 436 272 16 0 chr10 31741331 31741456 -113847832 - L1M4 LINE L1 -3070 3076 2950 2477 182 8 45 chr10 31741473 31741989 -113847299 + L1MD1 LINE L1 5746 6242 0 940 143 7 0 chr10 31741997 31742137 -113847151 + FAM SINE Alu 18 158 -27 28 29 0 0 chr10 31742141 31742176 -113847112 + AT_rich Low_complexity Low_complexity 1 35 0 227 268 52 41 chr10 31742722 31742819 -113846469 + L2 LINE L2 2986 3083 -189 186 255 20 39 chr10 31742917 31742934 -113846354 + L2 LINE L2 3197 3213 -59 575 201 214 0 chr10 31742934 31743088 -113846200 + MER5A DNA MER1_type 3 189 0 186 255 20 39 chr10 31743088 31743121 -113846167 + L2 LINE L2 3213 3246 -26 2055 128 30 3 chr10 31743510 31743814 -113845474 + AluSx SINE Alu 1 312 0 1964 141 0 3 chr10 31743837 31744121 -113845167 + AluJb SINE Alu 1 283 -29 279 0 0 0 chr10 31744124 31744155 -113845133 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 1730 180 10 10 chr10 31744843 31745138 -113844150 - AluJo SINE Alu -13 299 5 2288 103 3 0 chr10 31745757 31746058 -113843230 + AluSg SINE Alu 1 302 -8 257 51 26 0 chr10 31746149 31746188 -113843100 + (GA)n Simple_repeat Simple_repeat 2 41 0 349 341 22 0 chr10 31747376 31747511 -113841777 + MIR3 SINE MIR 64 201 -7 472 302 112 6 chr10 31747836 31748015 -113841273 - MIR SINE MIR -10 252 55 182 241 56 0 chr10 31748098 31748152 -113841136 + L2 LINE L2 2728 2784 -530 1313 200 7 122 chr10 31748287 31748697 -113840591 + MLT1A1 LTR MaLR 3 365 0 226 184 0 20 chr10 31748890 31748939 -113840349 + L2 LINE L2 3262 3309 -4 2295 97 0 0 chr10 31749291 31749580 -113839708 - AluSg1 SINE Alu -18 291 3 373 140 0 0 chr10 31749780 31749837 -113839451 + FLAM SINE Alu 76 132 -1 209 300 153 7 chr10 31750451 31750601 -113838687 - MIR3 SINE MIR -7 201 30 23 0 0 0 chr10 31750825 31750848 -113838440 + AT_rich Low_complexity Low_complexity 1 23 0 1881 128 0 75 chr10 31750851 31751171 -113838117 + AluSx SINE Alu 1 296 -16 603 249 37 16 chr10 31751670 31751859 -113837429 + L1MC/D LINE L1 5569 5761 -2047 * 1733 130 0 4 chr10 31751856 31752118 -113837170 - MSTA-int LTR MaLR -1390 261 1 2098 148 65 32 chr10 31752120 31752477 -113836811 - MSTA LTR MaLR -2 426 52 1810 189 3 0 chr10 31752477 31752778 -113836510 - AluJo SINE Alu -10 302 1 2098 148 65 32 chr10 31752778 31752832 -113836456 - MSTA LTR MaLR -376 52 1 1319 280 48 46 chr10 31752832 31753415 -113835873 - L2 LINE L2 -445 2869 2286 545 265 69 111 chr10 31753454 31753468 -113835820 - MLT1J LTR MaLR -8 503 490 2505 104 11 8 chr10 31753468 31753822 -113835466 + THE1A LTR MaLR 1 355 0 545 265 69 111 chr10 31753822 31754140 -113835148 - MLT1J LTR MaLR -21 490 190 1967 147 0 3 chr10 31754140 31754433 -113834855 - AluJo SINE Alu -5 307 16 545 265 69 111 chr10 31754433 31754521 -113834767 - MLT1J LTR MaLR -321 190 100 211 270 27 14 chr10 31754941 31755015 -113834273 + GA-rich Low_complexity Low_complexity 1 75 0 1806 161 13 56 chr10 31756078 31756470 -113832818 + THE1C LTR MaLR 1 375 0 606 312 28 0 chr10 31756473 31756723 -113832565 - L1MC4 LINE L1 -981 7061 6805 2111 113 0 64 chr10 31758548 31758875 -113830413 - AluSq SINE Alu -7 306 1 2283 102 0 0 chr10 31759397 31759728 -113829560 + AluSx SINE Alu 1 331 0 370 289 168 26 chr10 31760246 31760324 -113828964 - L2 LINE L2 -188 3125 3059 2310 93 7 7 chr10 31760324 31760625 -113828663 - AluSx SINE Alu -11 301 1 370 289 168 26 chr10 31760625 31760926 -113828362 - L2 LINE L2 -254 3059 2802 1709 162 10 26 chr10 31760926 31761228 -113828060 + AluJo SINE Alu 4 300 -12 1939 123 87 0 chr10 31761228 31761504 -113827784 + AluSx SINE Alu 1 300 -12 370 289 168 26 chr10 31761504 31761613 -113827675 - L2 LINE L2 -510 2803 2554 267 157 50 0 chr10 31761694 31761805 -113827483 + CT-rich Low_complexity Low_complexity 1 116 0 496 278 5 97 chr10 31761882 31762098 -113827190 - MER91A DNA MER1_type 0 196 1 691 279 142 43 chr10 31762098 31762264 -113827024 - L2 LINE L2 -961 2353 2205 2315 103 0 13 chr10 31762264 31762576 -113826712 - AluSc SINE Alu 0 309 2 691 279 142 43 chr10 31762576 31763087 -113826201 - L2 LINE L2 -1109 2205 1609 195 69 0 0 chr10 31763456 31763485 -113825803 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 261 285 70 12 chr10 31763886 31764058 -113825230 + L1ME4a LINE L1 5269 5450 -714 1109 99 0 52 chr10 31764131 31764303 -113824985 - AluSg/x SINE Alu -16 294 132 435 271 150 31 chr10 31764303 31764551 -113824737 + L1ME4a LINE L1 5549 5766 -355 1467 196 32 54 chr10 31764551 31764924 -113824364 + MLT1A1 LTR MaLR 1 365 0 435 271 150 31 chr10 31764924 31765187 -113824101 + L1ME4a LINE L1 5766 6121 0 1250 171 5 0 chr10 31765212 31765405 -113823883 - AluJo SINE Alu -118 194 1 197 200 100 57 chr10 31765670 31765740 -113823548 + L2 LINE L2 3200 3272 0 224 309 0 0 chr10 31765832 31765900 -113823388 + MER5A DNA MER1_type 10 77 -112 2276 119 0 0 chr10 31766032 31766326 -113822962 - AluSx SINE Alu -18 294 1 224 39 0 0 chr10 31766498 31766524 -113822764 + (T)n Simple_repeat Simple_repeat 1 26 0 352 203 27 0 chr10 31767409 31767483 -113821805 - MER34 LTR ERV1 -22 520 445 225 192 77 0 chr10 31767495 31767547 -113821741 - LTR48 LTR ERV1 -118 669 614 332 258 39 45 chr10 31767587 31767742 -113821546 - LTR48B LTR ERV1 -350 294 141 * 404 261 8 25 chr10 31767721 31767840 -113821448 - MER34 LTR ERV1 -423 119 3 308 83 21 0 chr10 31767979 31768027 -113821261 + (TC)n Simple_repeat Simple_repeat 1 49 0 2010 134 40 0 chr10 31768027 31768326 -113820962 - AluSx SINE Alu -1 311 1 301 345 42 12 chr10 31768659 31768824 -113820464 + MIR SINE MIR 8 177 -85 2156 105 0 20 chr10 31768956 31769252 -113820036 - AluSx SINE Alu -22 290 1 1838 155 10 13 chr10 31770041 31770345 -113818943 + AluJo SINE Alu 1 303 -9 2215 125 0 0 chr10 31770638 31770950 -113818338 + AluSx SINE Alu 1 312 0 623 278 44 31 chr10 31772974 31773201 -113816087 + MLT1H LTR MaLR 2 231 -318 342 277 57 34 chr10 31773319 31773496 -113815792 - MLT1G LTR MaLR 0 590 410 324 265 34 26 chr10 31773682 31773799 -113815489 - MLT1G LTR MaLR -462 128 11 2083 138 0 3 chr10 31773955 31774285 -113815003 + AluSx SINE Alu 1 329 0 2239 165 41 13 chr10 31774771 31775232 -113814056 - MER101 LTR ERV1 0 474 1 477 217 0 57 chr10 31775249 31775355 -113813933 - L1M3 LINE L1 -400 5783 5684 776 285 88 40 chr10 31775674 31776247 -113813041 + MLT1G LTR MaLR 17 590 0 1361 263 25 28 chr10 31776486 31776843 -113812445 - MER115 DNA AcHobo 0 693 338 565 227 35 67 chr10 31777015 31777240 -113812048 - MER77 LTR ERV1 -4 601 414 33 0 0 0 chr10 31777390 31777423 -113811865 + AT_rich Low_complexity Low_complexity 1 33 0 2047 107 0 0 chr10 31778046 31778318 -113810970 + AluSq SINE Alu 31 302 -11 1789 153 4 14 chr10 31778484 31778765 -113810523 - AluJb SINE Alu -34 278 1 308 300 8 39 chr10 31778766 31778896 -113810392 - MIR SINE MIR -9 253 128 278 170 0 0 chr10 31778970 31779023 -113810265 - L2 LINE L2 0 3313 3261 273 278 154 25 chr10 31779492 31779654 -113809634 - L3 LINE CR1 -111 1466 1284 188 298 170 7 chr10 31779668 31779809 -113809479 - L3 LINE CR1 -270 1307 1144 1112 168 0 0 chr10 31780160 31780327 -113808961 - AluJb SINE Alu -18 294 128 2298 104 10 0 chr10 31780467 31780764 -113808524 - AluSx SINE Alu -12 300 1 605 274 58 53 chr10 31780861 31781087 -113808201 + MER115 DNA AcHobo 338 564 -129 2033 117 9 27 chr10 31781134 31781468 -113807820 - L1PA14 LINE L1 0 6161 5834 768 200 0 0 chr10 31781494 31781648 -113807640 - FLAM_C SINE Alu 0 157 4 21 0 0 0 chr10 31781849 31781870 -113807418 + AT_rich Low_complexity Low_complexity 1 21 0 2338 83 7 0 chr10 31781967 31782267 -113807021 + AluY SINE Alu 1 302 -9 241 231 30 127 chr10 31782609 31782743 -113806545 - MIR SINE MIR -79 183 63 484 106 39 7 chr10 31783578 31783796 -113805492 + (TCCA)n Simple_repeat Simple_repeat 1 293 0 579 144 50 9 chr10 31783832 31784058 -113805230 + (TCCA)n Simple_repeat Simple_repeat 1 235 0 673 133 38 14 chr10 31784080 31784377 -113804911 + (TCCA)n Simple_repeat Simple_repeat 1 304 0 1030 206 161 0 chr10 31785361 31785604 -113803684 + AluSx SINE Alu 1 282 -30 347 0 0 23 chr10 31785608 31785652 -113803636 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 610 189 18 0 chr10 31785707 31785818 -113803470 - MER81 DNA DNA 0 114 2 314 253 156 13 chr10 31787389 31787500 -113801788 - MIR SINE MIR -1 261 121 1650 192 4 4 chr10 31787500 31787781 -113801507 - AluJb SINE Alu -19 293 13 314 253 156 13 chr10 31787781 31787823 -113801465 - MIR SINE MIR -141 121 86 224 284 43 17 chr10 31787857 31787973 -113801315 - L3b LINE CR1 -152 1431 1313 26 30 0 0 chr10 31788642 31788675 -113800613 + AT_rich Low_complexity Low_complexity 1 33 0 182 289 31 31 chr10 31788983 31789080 -113800208 + L2 LINE L2 1812 1908 -1406 263 394 0 8 chr10 31789578 31789710 -113799578 + L2 LINE L2 3142 3272 0 676 257 87 9 chr10 31789813 31790031 -113799257 + MIR SINE MIR 22 256 -6 356 0 0 22 chr10 31792178 31792223 -113797065 + (TAA)n Simple_repeat Simple_repeat 2 45 0 257 245 0 0 chr10 31792843 31792896 -113796392 - L1MC5 LINE L1 -1188 6773 6721 254 290 0 0 chr10 31793626 31793695 -113795593 + MIR SINE MIR 187 255 -7 1817 184 13 0 chr10 31793911 31794216 -113795072 + AluJo SINE Alu 1 309 -3 563 228 60 48 chr10 31795814 31795981 -113793307 - MER69A DNA AcHobo -8 169 1 784 140 15 37 chr10 31796599 31796735 -113792553 - FLAM_C SINE Alu 0 133 1 360 264 47 0 chr10 31797191 31797297 -113791991 - MER103 DNA DNA -1 165 55 2189 118 6 10 chr10 31797304 31797617 -113791671 + AluSx SINE Alu 1 312 0 252 327 99 19 chr10 31798207 31798245 -113791043 - MIR SINE MIR -70 192 158 3566 60 4 2 chr10 31798245 31798696 -113790592 - L1PA13 LINE L1 -3 6160 5709 252 327 99 19 chr10 31798696 31798821 -113790467 - MIR SINE MIR -104 158 19 468 252 77 19 chr10 31800423 31800578 -113788710 + LTR37B LTR ERV1 6 169 -299 967 134 47 6 chr10 31800580 31800751 -113788537 + L1MA5 LINE L1 6059 6236 -64 887 160 13 0 chr10 31800751 31800901 -113788387 + MSTB1 LTR MaLR 1 152 -274 1603 137 72 12 chr10 31801008 31801308 -113787980 + MSTB1 LTR MaLR 130 432 0 408 94 31 0 chr10 31801308 31801372 -113787916 + L1MA5 LINE L1 6230 6295 -5 590 223 93 40 chr10 31801447 31801694 -113787594 + LTR37B LTR ERV1 198 457 -11 624 235 65 0 chr10 31802677 31802847 -113786441 + L1PB4 LINE L1 5976 6156 0 1914 167 7 0 chr10 31802938 31803238 -113786050 + AluSx SINE Alu 1 302 -10 21 57 0 0 chr10 31803796 31803831 -113785457 + AT_rich Low_complexity Low_complexity 1 35 0 393 194 15 0 chr10 31803832 31803899 -113785389 + MER45 DNA AcHobo 1513 1580 -1 2222 114 3 19 chr10 31804926 31805243 -113784045 - AluSx SINE Alu 0 312 1 373 294 56 20 chr10 31805322 31805519 -113783769 + MER31-int LTR ERV1 3855 4058 -878 1767 176 58 6 chr10 31805864 31806194 -113783094 + MLT1A1 LTR MaLR 19 365 0 823 205 72 85 chr10 31806194 31806525 -113782763 + LTR37B LTR ERV1 92 418 -50 1912 161 0 7 chr10 31806527 31806825 -113782463 - AluJo SINE Alu -16 296 1 5855 184 37 6 chr10 31807081 31808334 -113780954 - L1 LINE L1 -1715 4431 3140 2140 81 36 32 chr10 31808457 31808766 -113780522 - AluSg SINE Alu 0 310 1 1080 239 11 11 chr10 31809856 31810116 -113779172 - MIR SINE MIR 0 262 3 210 345 0 0 chr10 31810140 31810195 -113779093 + L2 LINE L2 3251 3305 -8 951 233 43 0 chr10 31811025 31811235 -113778053 + MER58A DNA MER1_type 2 220 -4 259 126 0 0 chr10 31812981 31813020 -113776268 + AluSp SINE Alu 137 170 -133 1608 167 24 20 chr10 31813025 31813318 -113775970 + AluJo SINE Alu 15 308 -4 379 315 95 45 chr10 31814365 31814724 -113774564 - L2 LINE L2 -571 2743 2367 1079 141 18 12 chr10 31814977 31815147 -113774141 + AluJb SINE Alu 126 296 -16 265 302 63 50 chr10 31815488 31815647 -113773641 + MLT1K LTR MaLR 198 358 -230 3802 177 43 55 chr10 31815835 31816133 -113773155 - L1MB7 LINE L1 -15 6169 5869 2239 193 39 55 chr10 31816133 31816174 -113773114 - MLT2B3 LTR ERVL 0 554 514 351 0 0 0 chr10 31816174 31816213 -113773075 + (TA)n Simple_repeat Simple_repeat 2 40 0 2239 193 39 55 chr10 31816213 31816732 -113772556 - MLT2B3 LTR ERVL -40 514 3 3802 177 43 55 chr10 31816732 31817638 -113771650 - L1MB7 LINE L1 -315 5869 4973 411 254 16 8 chr10 31817764 31817886 -113771402 - MER103 DNA DNA -10 156 34 1204 304 68 2 chr10 31817931 31818243 -113771045 + LTR16A LTR ERVL 25 370 -80 573 15 0 0 chr10 31818243 31818309 -113770979 + (TTCCC)n Simple_repeat Simple_repeat 1 66 0 1204 304 68 2 chr10 31818309 31818391 -113770897 + LTR16A LTR ERVL 370 445 -5 465 269 0 0 chr10 31818685 31818793 -113770495 + L2 LINE L2 3201 3308 -5 1006 105 7 20 chr10 31819039 31819192 -113770096 - AluSg/x SINE Alu -13 297 147 316 208 26 52 chr10 31819295 31819372 -113769916 - MER20 DNA MER1_type -142 77 3 921 222 124 50 chr10 31819455 31819837 -113769451 - MLT1G LTR MaLR 0 530 129 2086 137 10 0 chr10 31819846 31820145 -113769143 - AluSx SINE Alu -10 302 1 1970 92 81 18 chr10 31820771 31821044 -113768244 - AluSx SINE Alu -22 290 1 2064 128 0 41 chr10 31821172 31821491 -113767797 - AluSx SINE Alu -6 306 1 814 173 27 129 chr10 31821893 31822188 -113767100 + MER33 DNA MER1_type 6 270 -54 333 174 14 0 chr10 31822228 31822297 -113766991 + MER33 DNA MER1_type 272 341 -22 204 260 0 0 chr10 31822655 31822705 -113766583 - L2 LINE L2 -1 3312 3263 554 233 171 29 chr10 31823712 31824021 -113765267 - L1MC4 LINE L1 0 8042 7690 216 0 0 0 chr10 31824076 31824100 -113765188 + (T)n Simple_repeat Simple_repeat 1 24 0 739 225 7 0 chr10 31824148 31824299 -113764989 + MER34 LTR ERV1 1 152 -390 2169 141 0 0 chr10 31824299 31824598 -113764690 + AluSq SINE Alu 1 299 -14 1151 108 0 0 chr10 31824600 31824775 -113764513 + AluSq SINE Alu 139 313 0 490 121 52 69 chr10 31824787 31824903 -113764385 - L1ME1 LINE L1 -146 6020 5907 254 240 20 0 chr10 31825829 31825879 -113763409 + MER5A DNA MER1_type 1 51 -138 1187 232 111 24 chr10 31825881 31826379 -113762909 - MLT1F LTR MaLR -2 540 9 655 177 24 0 chr10 31826395 31826519 -113762769 + MER5A DNA MER1_type 61 187 -2 1044 191 61 14 chr10 31826671 31827086 -113762202 + MLT1D LTR MaLR 5 505 0 2182 129 39 3 chr10 31827366 31827699 -113761589 - MSTA LTR MaLR -83 345 1 1006 214 68 93 chr10 31827724 31828046 -113761242 - MER77 LTR ERV1 -240 365 52 1661 136 0 66 chr10 31828364 31828665 -113760623 - AluJb SINE Alu -31 281 1 541 282 182 42 chr10 31828859 31829179 -113760109 + L3 LINE CR1 391 773 -804 1760 148 0 23 chr10 31829179 31829483 -113759805 + AluJo SINE Alu 1 297 -15 541 282 182 42 chr10 31829483 31829541 -113759747 + L3 LINE CR1 773 822 -755 807 108 0 0 chr10 31829551 31829671 -113759617 + (TA)n Simple_repeat Simple_repeat 1 120 0 1243 290 148 21 chr10 31829829 31830350 -113758938 + L3 LINE CR1 872 1458 -119 517 270 17 63 chr10 31831994 31832168 -113757120 + MER5B DNA MER1_type 13 178 0 250 211 70 18 chr10 31832523 31832580 -113756708 + MIR3 SINE MIR 97 156 -52 2561 110 16 14 chr10 31832995 31833358 -113755930 + THE1B LTR MaLR 1 364 0 376 232 150 63 chr10 31834121 31834328 -113754960 - L2 LINE L2 -5 3308 3084 204 229 0 21 chr10 31834705 31834753 -113754535 + GA-rich Low_complexity Low_complexity 3 49 0 29 132 0 0 chr10 31835095 31835148 -113754140 + GC_rich Low_complexity Low_complexity 1 53 0 383 270 9 47 chr10 31835374 31835631 -113753657 + GA-rich Low_complexity Low_complexity 1 247 0 189 292 21 0 chr10 31835816 31835864 -113753424 - L2 LINE L2 -87 3185 3137 389 248 36 22 chr10 31836645 31836782 -113752506 + MIR3 SINE MIR 21 159 -49 1608 158 17 20 chr10 31837872 31838164 -113751124 - AluJb SINE Alu -21 291 1 353 299 19 0 chr10 31838164 31838271 -113751017 - L2 LINE L2 -12 3301 3193 277 308 83 13 chr10 31838421 31838577 -113750711 + MIR SINE MIR 89 255 -7 426 250 42 17 chr10 31838957 31839077 -113750211 + MIR SINE MIR 62 184 -78 2299 161 3 6 chr10 31839201 31839567 -113749721 - MLT1A1 LTR MaLR 0 365 1 1408 189 10 16 chr10 31839940 31840247 -113749041 + AluJo SINE Alu 1 305 -7 2284 131 103 5 chr10 31840254 31840644 -113748644 - MSTA LTR MaLR 0 428 1 787 218 73 109 chr10 31841523 31841973 -113747315 + MLT1H LTR MaLR 117 391 -18 734 222 46 42 chr10 31842032 31842261 -113747027 - MLT2D LTR ERVL 0 414 227 1007 126 116 37 chr10 31842305 31842520 -113746768 - AluJo SINE Alu -6 306 75 787 231 46 5 chr10 31842526 31842721 -113746567 - MLT2D LTR ERVL -211 203 1 303 242 121 20 chr10 31842784 31842883 -113746405 + MIR SINE MIR 19 127 -81 1710 137 161 75 chr10 31843189 31843561 -113745727 - MER4A LTR ERV1 0 664 261 580 120 22 0 chr10 31843563 31843655 -113745633 - MER4A LTR ERV1 -570 94 1 390 303 86 41 chr10 31843822 31844112 -113745176 + MLT1K LTR MaLR 124 426 -162 1316 174 8 0 chr10 31844208 31844449 -113744839 - AluJo SINE Alu -30 282 40 1386 186 6 35 chr10 31845158 31845476 -113743812 - AluJo SINE Alu -1 311 3 201 171 24 0 chr10 31845952 31845993 -113743295 + (CA)n Simple_repeat Simple_repeat 2 43 0 232 195 13 39 chr10 31846291 31846368 -113742920 + (TTA)n Simple_repeat Simple_repeat 3 77 0 200 236 27 146 chr10 31846539 31846649 -113742639 + MIR3 SINE MIR 109 205 -3 971 284 77 0 chr10 31846842 31847141 -113742147 + MER69 DNA AcHobo 2 323 -903 340 298 107 51 chr10 31847351 31847529 -113741759 + MIR SINE MIR 17 204 -58 272 276 46 11 chr10 31847692 31847779 -113741509 - MIR SINE MIR -81 127 38 578 292 19 48 chr10 31847917 31848126 -113741162 - MIR SINE MIR -58 204 2 636 225 103 9 chr10 31848479 31848639 -113740649 + MER5B DNA MER1_type 3 183 -6 1907 136 0 17 chr10 31848728 31849029 -113740259 - AluSx SINE Alu -14 298 3 1125 120 6 17 chr10 31849031 31849206 -113740082 - AluJb SINE Alu -6 306 134 2076 123 0 3 chr10 31849206 31849506 -113739782 - AluSx SINE Alu -13 299 1 345 352 48 52 chr10 31849576 31849786 -113739502 + L1MC/D LINE L1 5538 5746 -2062 2099 96 24 0 chr10 31849966 31850258 -113739030 + AluSc SINE Alu 1 299 -10 927 136 116 0 chr10 31850405 31850552 -113738736 + AluSg SINE Alu 1 164 -146 845 138 0 0 chr10 31850952 31851075 -113738213 + FLAM_C SINE Alu 3 125 -8 1594 142 3 88 chr10 31852052 31852391 -113736897 - AluJo SINE Alu -2 310 1 222 306 0 16 chr10 31852461 31852523 -113736765 + MIR SINE MIR 5 65 -197 610 199 48 12 chr10 31852596 31852762 -113736526 - MER96B DNA MER1_type? -238 179 8 408 229 98 33 chr10 31852793 31852946 -113736342 + MIR SINE MIR 86 248 -14 1852 217 48 30 chr10 31853867 31854304 -113734984 + MLT1D LTR MaLR 1 445 -60 1378 131 131 0 chr10 31854305 31854550 -113734738 - AluSx SINE Alu -8 304 28 1834 131 28 3 chr10 31854696 31854979 -113734309 + AluSx SINE Alu 1 290 -22 222 118 0 0 chr10 31855112 31855146 -113734142 + (GGA)n Simple_repeat Simple_repeat 3 36 0 2352 90 0 0 chr10 31855908 31856218 -113733070 + AluSx SINE Alu 1 310 -2 706 298 38 23 chr10 31856927 31857189 -113732099 + MLT1I LTR MaLR 144 409 0 2222 112 0 3 chr10 31857416 31857730 -113731558 + AluSq SINE Alu 1 313 0 209 326 42 32 chr10 31857949 31858044 -113731244 + L2 LINE L2 3184 3279 -34 902 265 56 20 chr10 31858215 31858521 -113730767 + L1ME3A LINE L1 5559 5875 -295 330 230 6 36 chr10 31859070 31859235 -113730053 + CT-rich Low_complexity Low_complexity 3 162 0 2136 114 0 0 chr10 31859313 31859728 -113729560 - AluSx SINE Alu 0 415 1 559 195 24 12 chr10 31859746 31859915 -113729373 + CT-rich Low_complexity Low_complexity 3 173 0 249 210 16 16 chr10 31859949 31860011 -113729277 + CT-rich Low_complexity Low_complexity 1 62 0 546 302 40 18 chr10 31861155 31861380 -113727908 + MIR SINE MIR 8 237 -25 2853 149 50 27 chr10 31861382 31861777 -113727511 + MER1A DNA MER1_type 1 412 -2288 2113 112 0 19 chr10 31861777 31862076 -113727212 + AluSx SINE Alu 1 295 -17 876 108 0 0 chr10 31862076 31862206 -113727082 + (GGAA)n Simple_repeat Simple_repeat 3 132 0 2113 112 0 19 chr10 31862206 31862219 -113727069 + AluSx SINE Alu 295 307 -5 2853 149 50 27 chr10 31862219 31862338 -113726950 + MER1A DNA MER1_type 412 527 0 29 28 0 0 chr10 31862631 31862667 -113726621 + AT_rich Low_complexity Low_complexity 1 36 0 193 148 93 0 chr10 31864036 31864090 -113725198 + (TCTCTG)n Simple_repeat Simple_repeat 2 60 0 1414 186 16 47 chr10 31864492 31864814 -113724474 + AluJo SINE Alu 1 312 0 404 62 49 25 chr10 31864819 31864900 -113724388 + GA-rich Low_complexity Low_complexity 2 84 0 1729 209 98 15 chr10 31865228 31865625 -113723663 + MLT2B1 LTR ERVL 1 430 -90 518 212 10 0 chr10 31865626 31865725 -113723563 - MLT2B1 LTR ERVL -48 472 373 1923 169 30 82 chr10 31865748 31865922 -113723366 - MSTB1 LTR MaLR -12 420 238 2149 130 119 8 chr10 31865922 31866307 -113722981 - MSTA LTR MaLR 0 428 1 1923 169 30 82 chr10 31866307 31866571 -113722717 - MSTB1 LTR MaLR -194 238 5 285 30 0 0 chr10 31866576 31866609 -113722679 + MLT2C1 LTR ERVL 365 397 0 721 282 74 12 chr10 31866922 31867299 -113721989 + L2 LINE L2 2734 3134 -179 594 163 3 24 chr10 31867301 31867436 -113721852 - L1PA16 LINE L1 -118 6038 5913 361 268 27 27 chr10 31867443 31867555 -113721733 + MLT1J2 LTR MaLR 67 178 -272 230 130 93 19 chr10 31867588 31867642 -113721646 + MLT1J1 LTR MaLR 266 323 -123 1882 131 14 14 chr10 31867910 31868200 -113721088 + AluSx SINE Alu 1 290 -22 723 24 0 0 chr10 31868200 31868285 -113721003 + (GGAA)n Simple_repeat Simple_repeat 2 86 0 1161 158 29 29 chr10 31868403 31868643 -113720645 - THE1C LTR MaLR -7 368 129 309 135 0 0 chr10 31868687 31868739 -113720549 + (GGAA)n Simple_repeat Simple_repeat 3 54 0 2501 111 30 52 chr10 31869183 31869590 -113719698 - MER48 LTR ERV1 0 398 1 325 306 138 64 chr10 31869602 31869929 -113719359 + L2 LINE L2 2863 3213 -100 1641 206 25 15 chr10 31869941 31870266 -113719022 - LTR40a LTR ERVL -13 506 179 2205 168 38 33 chr10 31870277 31870827 -113718461 - MLT2A2 LTR ERVL 0 554 1 513 210 169 0 chr10 31870829 31870953 -113718335 - LTR40a LTR ERVL -350 169 25 1403 178 165 3 chr10 31871211 31871526 -113717762 - MER47A DNA MER2_type 0 366 1 350 284 101 41 chr10 31871528 31872043 -113717245 - L1MC4a LINE L1 -355 5807 5554 395 251 164 69 chr10 31872453 31872691 -113716597 + MLT1H LTR MaLR 225 521 -34 1966 107 0 0 chr10 31872691 31872972 -113716316 - AluSg SINE Alu 0 299 19 395 251 164 69 chr10 31872972 31873011 -113716277 + MLT1H LTR MaLR 521 555 0 2589 102 3 24 chr10 31873069 31873441 -113715847 - THE1B LTR MaLR 0 364 1 2212 142 31 0 chr10 31873779 31874132 -113715156 - THE1B LTR MaLR 0 364 1 207 203 0 0 chr10 31874802 31874861 -113714427 + CT-rich Low_complexity Low_complexity 2 60 0 309 366 84 14 chr10 31874862 31875075 -113714213 + L3b LINE CR1 1268 1495 -88 2076 115 0 0 chr10 31875300 31875586 -113713702 - AluSx SINE Alu -26 286 1 324 141 0 127 chr10 31875736 31875807 -113713481 + MLT1E1 LTR MaLR 1 62 -592 2233 93 0 13 chr10 31876433 31876744 -113712544 + AluSx SINE Alu 5 311 -1 1884 125 4 0 chr10 31877122 31877435 -113711853 - AluSx SINE Alu 0 314 1 274 229 66 119 chr10 31877471 31877698 -113711590 - L1MC4 LINE L1 -1 8041 7827 832 263 98 40 chr10 31877754 31878150 -113711138 - L1ME2 LINE L1 -33 6131 5713 2028 138 10 7 chr10 31878332 31878629 -113710659 - AluSx SINE Alu -14 298 1 242 296 45 11 chr10 31879034 31879122 -113710166 + MIR3 SINE MIR 91 181 -27 251 200 0 40 chr10 31879163 31879238 -113710050 + (TATG)n Simple_repeat Simple_repeat 1 72 0 1708 168 29 83 chr10 31880080 31880214 -113709074 + MLT1A1 LTR MaLR 1 141 -224 1730 108 0 21 chr10 31880214 31880455 -113708833 + AluSx SINE Alu 64 299 -13 1708 168 29 83 chr10 31880455 31880651 -113708637 + MLT1A1 LTR MaLR 141 310 -55 1974 180 22 32 chr10 31880651 31881051 -113708237 + MSTD LTR MaLR 1 396 0 1708 168 29 83 chr10 31881051 31881105 -113708183 + MLT1A1 LTR MaLR 310 365 0 1687 279 124 58 chr10 31881114 31882006 -113707282 - MER45C DNA AcHobo 0 953 3 1119 215 42 0 chr10 31882434 31882699 -113706589 + MER69 DNA AcHobo 82 357 -2169 1909 223 62 23 chr10 31883051 31883701 -113705587 + MER69 DNA AcHobo 1845 2519 -7 701 167 0 9 chr10 31883985 31884116 -113705172 + AluSg/x SINE Alu 177 308 -308 2041 126 0 0 chr10 31884116 31884401 -113704887 + AluSx SINE Alu 1 285 -27 701 167 0 9 chr10 31884401 31884426 -113704862 + AluSg/x SINE Alu 308 616 0 310 344 117 23 chr10 31885913 31886221 -113703067 + L2 LINE L2 2481 2817 -497 1990 109 18 21 chr10 31886242 31886555 -113702733 - AluSx SINE Alu 0 312 1 457 270 0 0 chr10 31887919 31888019 -113701269 - MER81 DNA DNA 0 114 15 1444 168 47 34 chr10 31888182 31888479 -113700809 - AluJo SINE Alu -11 301 1 671 149 37 0 chr10 31888493 31888600 -113700688 - FLAM_C SINE Alu -19 124 14 2212 114 0 3 chr10 31890179 31890478 -113698810 - AluSx SINE Alu -14 298 1 284 88 123 0 chr10 31891114 31891171 -113698117 - L1MA4A LINE L1 0 6303 6240 1123 70 0 0 chr10 31891255 31891397 -113697891 + L1MA1 LINE L1 6161 6302 0 955 139 48 12 chr10 31892331 31892496 -113696792 + FAM SINE Alu 5 175 0 2521 143 11 28 chr10 31892703 31893033 -113696255 - MSTA LTR MaLR 0 428 105 2340 96 0 7 chr10 31893033 31893336 -113695952 + AluSx SINE Alu 1 301 -11 2521 143 11 28 chr10 31893336 31893440 -113695848 - MSTA LTR MaLR -323 105 1 1058 124 0 68 chr10 31893627 31893804 -113695484 - AluSg/x SINE Alu -19 293 129 1210 245 65 7 chr10 31893884 31894300 -113694988 - Charlie2 DNA MER1_type -5 2857 2418 1128 133 0 0 chr10 31894417 31894575 -113694713 + FRAM SINE Alu 1 151 -25 433 247 123 12 chr10 31895950 31896120 -113693168 + MLT1J LTR MaLR 273 461 -50 2400 113 30 25 chr10 31896127 31896489 -113692799 + THE1B LTR MaLR 1 364 0 422 282 8 8 chr10 31896650 31896767 -113692521 - L2 LINE L2 0 3313 3197 2142 107 10 7 chr10 31896938 31897238 -113692050 + AluSx SINE Alu 1 301 -11 23 33 0 0 chr10 31897516 31897546 -113691742 + AT_rich Low_complexity Low_complexity 1 30 0 2178 139 108 8 chr10 31897585 31897972 -113691316 - MSTA LTR MaLR 0 428 3 1707 265 81 11 chr10 31898007 31898561 -113690727 - L1ME3A LINE L1 -19 6151 5559 200 323 43 32 chr10 31898733 31898826 -113690462 - L2 LINE L2 -36 3236 3143 2261 116 0 3 chr10 31899045 31899346 -113689942 - AluSq SINE Alu -13 300 1 719 294 38 23 chr10 31899573 31899835 -113689453 - MLT1I LTR MaLR 0 409 144 1683 154 29 29 chr10 31900596 31900907 -113688381 + AluSx SINE Alu 1 311 -1 255 188 94 58 chr10 31900910 31900972 -113688316 - Charlie2 DNA MER1_type -489 2373 2315 1814 168 0 30 chr10 31900972 31901276 -113688012 + AluJb SINE Alu 1 295 -17 255 188 94 58 chr10 31901276 31901351 -113687937 - Charlie2 DNA MER1_type -547 2315 2231 1774 223 73 62 chr10 31901428 31901554 -113687734 + MLT1E LTR MaLR 2 125 -468 1546 146 4 0 chr10 31901554 31901845 -113687443 + L1MA4 LINE L1 6031 6322 0 1774 223 73 62 chr10 31901845 31902264 -113687024 + MLT1E LTR MaLR 125 554 -39 524 265 59 55 chr10 31902303 31902463 -113686825 - Charlie2 DNA MER1_type -2523 259 96 2138 109 0 3 chr10 31902463 31902756 -113686532 + AluSg SINE Alu 2 293 -17 524 265 59 55 chr10 31902756 31902848 -113686440 - Charlie2 DNA MER1_type -2686 96 6 1659 158 4 18 chr10 31903320 31903598 -113685690 - AluJo SINE Alu -20 292 19 299 236 16 94 chr10 31903686 31903813 -113685475 - L1ME4a LINE L1 -27 6094 5978 214 205 0 0 chr10 31905003 31905042 -113684246 - L2 LINE L2 -13 3300 3262 2018 169 22 17 chr10 31905455 31905817 -113683471 + MLT1A1 LTR MaLR 1 364 -1 1828 147 3 18 chr10 31908084 31908393 -113680895 + AluSx SINE Alu 2 306 0 366 302 23 0 chr10 31909407 31909536 -113679752 - MIR SINE MIR -15 247 116 1939 136 35 43 chr10 31909545 31909975 -113679313 + THE1C LTR MaLR 1 363 -12 231 343 10 30 chr10 31909978 31910077 -113679211 - MIR SINE MIR -150 112 16 366 271 10 0 chr10 31910676 31910772 -113678516 - L2 LINE L2 -15 3257 3161 871 166 7 0 chr10 31910979 31911118 -113678170 + AluJb SINE Alu 160 299 -13 510 261 119 30 chr10 31911118 31911421 -113677867 - L2 LINE L2 -425 2889 2560 452 198 0 55 chr10 31911615 31911706 -113677582 + MER58A DNA MER1_type 9 94 -13 2069 113 32 0 chr10 31911777 31912059 -113677229 - AluSx SINE Alu -11 301 11 661 274 68 23 chr10 31912779 31912998 -113676290 + MLT1J2 LTR MaLR 37 265 -185 841 184 12 24 chr10 31913172 31913340 -113675948 - FAM SINE Alu -9 166 1 401 331 13 19 chr10 31913387 31913544 -113675744 + MIR SINE MIR 17 172 -90 273 259 24 12 chr10 31913548 31913633 -113675655 - L2 LINE L2 -3 3310 3225 416 180 36 54 chr10 31913812 31913901 -113675387 - MER96B DNA MER1_type? 0 417 329 1624 191 0 13 chr10 31913901 31914205 -113675083 + AluJo SINE Alu 1 300 -12 416 180 36 54 chr10 31914205 31914226 -113675062 - MER96B DNA MER1_type? -88 329 309 1236 144 156 64 chr10 31914234 31914561 -113674727 - THE1B LTR MaLR -7 357 1 592 138 69 31 chr10 31914561 31914685 -113674603 + MER96B DNA MER1_type? 100 228 -189 317 265 0 4 chr10 31915307 31915552 -113673736 + (TG)n Simple_repeat Simple_repeat 1 243 0 285 260 0 0 chr10 31915569 31915738 -113673550 + (TG)n Simple_repeat Simple_repeat 2 170 0 793 76 168 0 chr10 31916319 31916412 -113672876 - MER85 DNA T2_type 0 139 20 267 31 0 0 chr10 31916412 31916444 -113672844 + (CA)n Simple_repeat Simple_repeat 1 32 0 793 76 168 0 chr10 31916444 31916469 -113672819 - MER85 DNA T2_type -119 20 1 263 219 126 93 chr10 31916622 31916655 -113672633 + MIR SINE MIR 63 93 -169 1080 143 22 0 chr10 31916655 31916837 -113672451 + MER5A DNA MER1_type 1 186 -3 263 219 126 93 chr10 31916837 31916954 -113672334 + MIR SINE MIR 93 218 -44 1941 81 4 4 chr10 31917479 31917737 -113671551 + L1PA7 LINE L1 5891 6148 -6 2093 173 63 19 chr10 31917771 31918181 -113671107 - MSTA LTR MaLR 0 428 1 2511 116 27 36 chr10 31918276 31918343 -113670945 - L1MB3 LINE L1 -2 6181 6115 2250 105 0 0 chr10 31918343 31918628 -113670660 - AluSx SINE Alu -27 285 1 2511 116 27 36 chr10 31918628 31919000 -113670288 - L1MB3 LINE L1 -68 6115 5746 2029 104 22 0 chr10 31919064 31919342 -113669946 + AluSx SINE Alu 21 304 -8 2354 106 3 6 chr10 31919529 31919841 -113669447 + AluSx SINE Alu 1 311 -1 271 101 0 0 chr10 31920260 31920304 -113668984 + Alu SINE Alu 224 259 -43 446 278 23 17 chr10 31921037 31921210 -113668078 + L1MC4 LINE L1 7396 7569 -473 934 202 27 77 chr10 31921248 31921545 -113667743 - MER34 LTR ERV1 0 542 261 926 218 42 54 chr10 31921585 31921694 -113667594 - MER34 LTR ERV1 -284 258 149 2215 129 0 0 chr10 31921694 31921989 -113667299 - AluSx SINE Alu -17 295 1 926 218 42 54 chr10 31921989 31922140 -113667148 - MER34 LTR ERV1 -393 149 1 216 0 0 0 chr10 31922188 31922212 -113667076 + (A)n Simple_repeat Simple_repeat 1 24 0 388 207 82 22 chr10 31922267 31922402 -113666886 + L1MC4 LINE L1 7690 7832 -210 343 204 106 0 chr10 31922463 31922576 -113666712 + L1MC4 LINE L1 7918 8042 0 204 260 0 0 chr10 31923583 31923633 -113665655 + L2 LINE L2 3263 3312 -1 333 174 14 0 chr10 31923991 31924060 -113665228 - MER33 DNA MER1_type -22 302 233 814 173 27 129 chr10 31924100 31924395 -113664893 - MER33 DNA MER1_type -54 270 6 2064 128 0 41 chr10 31924797 31925116 -113664172 + AluSx SINE Alu 1 306 -6 1970 92 81 18 chr10 31925244 31925517 -113663771 + AluSx SINE Alu 1 290 -22 2217 111 3 0 chr10 31926144 31926442 -113662846 + AluSx SINE Alu 1 299 -13 2901 182 26 35 chr10 31926530 31927139 -113662149 + MER6A DNA MER2_type 2 605 0 2141 148 0 0 chr10 31927438 31927743 -113661545 + AluSx SINE Alu 1 305 -7 382 138 100 50 chr10 31927892 31927972 -113661316 + AluS SINE Alu 1 84 -219 1818 166 7 7 chr10 31928008 31928315 -113660973 + AluJo SINE Alu 1 307 -5 202 250 0 42 chr10 31928317 31928365 -113660923 - L2 LINE L2 -250 3022 2977 874 152 14 7 chr10 31929259 31929404 -113659884 - MER5A DNA MER1_type -43 146 1 660 217 12 4 chr10 31929417 31929661 -113659627 + GA-rich Low_complexity Low_complexity 1 246 0 3413 141 58 2 chr10 31929662 31930231 -113659057 - LTR26 LTR ERV1 0 603 3 1100 106 0 11 chr10 31930232 31930412 -113658876 + (GGAA)n Simple_repeat Simple_repeat 1 178 0 180 77 0 0 chr10 31930412 31930438 -113658850 + (GGGA)n Simple_repeat Simple_repeat 3 28 0 434 255 0 0 chr10 31930754 31930848 -113658440 - MER5A DNA MER1_type -87 102 9 254 295 11 32 chr10 31931295 31931390 -113657898 - MER5B DNA MER1_type 0 178 86 783 155 0 0 chr10 31931439 31931555 -113657733 + FLAM_C SINE Alu 12 127 -16 3236 172 45 35 chr10 31931763 31932425 -113656863 - L1MC2 LINE L1 -162 6182 5514 2138 105 16 0 chr10 31932460 31932764 -113656524 - AluSx SINE Alu -3 309 1 1824 137 7 3 chr10 31932860 31933183 -113656105 + AluJo SINE Alu 1 324 0 3508 51 19 19 chr10 31933430 31933897 -113655391 - L1PB1 LINE L1 -1 6150 5684 1712 167 6 26 chr10 31935397 31935708 -113653580 - AluJo SINE Alu -7 305 1 976 229 36 16 chr10 31935757 31936010 -113653278 - MIR SINE MIR -2 260 3 505 150 0 0 chr10 31936147 31936256 -113653032 - AluSg/x SINE Alu 0 310 202 329 26 0 0 chr10 31936256 31936294 -113652994 - AluSp SINE Alu -132 171 134 2225 94 0 0 chr10 31936296 31936593 -113652695 - AluSg SINE Alu -13 297 1 292 283 186 59 chr10 31936598 31936835 -113652453 - L1ME LINE L1 -346 5775 5509 1558 238 145 29 chr10 31937121 31937672 -113651616 - L1ME3A LINE L1 -15 6155 5541 531 239 26 7 chr10 31937682 31937837 -113651451 + L1M4 LINE L1 5188 5345 -801 1967 183 133 38 chr10 31937873 31938348 -113650940 - MLT2B1 LTR ERVL 0 520 1 2190 86 0 19 chr10 31938443 31938758 -113650530 - AluSc SINE Alu 0 309 1 712 237 50 7 chr10 31938758 31939029 -113650259 - L1M3 LINE L1 -740 5440 5161 1981 89 41 17 chr10 31939053 31939345 -113649943 - LTR9B LTR ERV1 -345 299 1 404 211 53 0 chr10 31939346 31939422 -113649866 + Tigger3(Golem) DNA MER2_type 2950 3029 0 294 243 29 58 chr10 31939441 31939544 -113649744 + L2 LINE L2 3171 3270 -43 233 235 0 0 chr10 31939914 31939965 -113649323 + L3 LINE CR1 1088 1138 -439 1116 174 38 9 chr10 31940516 31940728 -113648560 - MER20 DNA MER1_type -1 218 1 883 124 0 0 chr10 31940949 31941078 -113648210 - FLAM_C SINE Alu 0 133 5 352 253 81 90 chr10 31941363 31941761 -113647527 - MLT1J LTR MaLR -16 495 36 1785 167 14 0 chr10 31942245 31942539 -113646749 + AluSx SINE Alu 1 298 -14 1633 143 8 4 chr10 31942540 31942798 -113646490 + AluSx SINE Alu 38 296 -16 242 333 20 20 chr10 31943441 31943543 -113645745 - MER5B DNA MER1_type -41 137 36 216 259 56 0 chr10 31943608 31943662 -113645626 - MIR SINE MIR -65 143 87 240 221 58 19 chr10 31944448 31944552 -113644736 + (CA)n Simple_repeat Simple_repeat 1 108 0 351 237 40 35 chr10 31944727 31944900 -113644388 + (CA)n Simple_repeat Simple_repeat 2 175 0 317 263 71 0 chr10 31945068 31945167 -113644121 - L2 LINE L2 0 3313 3208 933 237 46 62 chr10 31945351 31945505 -113643783 - MER33 DNA MER1_type -2261 324 169 1891 97 0 81 chr10 31945505 31945839 -113643449 + AluSx SINE Alu 1 309 0 933 237 46 62 chr10 31945839 31946008 -113643280 - MER33 DNA MER1_type -2416 169 5 360 0 0 0 chr10 31946240 31946280 -113643008 + (CA)n Simple_repeat Simple_repeat 1 40 0 709 176 0 8 chr10 31946284 31946409 -113642879 + AluSg/x SINE Alu 177 300 -12 183 42 0 0 chr10 31947044 31947068 -113642220 + (A)n Simple_repeat Simple_repeat 1 24 0 327 260 67 19 chr10 31947190 31947294 -113641994 + MIR SINE MIR 75 183 -79 1773 200 67 49 chr10 31947319 31947828 -113641460 - LTR40a LTR ERVL 0 519 2 298 306 64 43 chr10 31947835 31948070 -113641218 - MIR SINE MIR -16 246 7 350 232 0 53 chr10 31948677 31948772 -113640516 - MIR SINE MIR -5 257 168 1780 159 6 16 chr10 31950333 31950648 -113638640 - AluSx SINE Alu 0 312 1 1388 246 82 32 chr10 31950651 31951053 -113638235 - MLT1F LTR MaLR -40 502 81 7246 105 15 8 chr10 31951083 31951209 -113638079 - L1MA3 LINE L1 0 6305 6181 1855 128 20 23 chr10 31951209 31951513 -113637775 - AluSx SINE Alu -9 303 1 7246 105 15 8 chr10 31951513 31952596 -113636692 - L1MA3 LINE L1 -124 6181 5088 228 217 22 0 chr10 31952617 31952663 -113636625 - L1ME4a LINE L1 -88 6033 5987 326 295 71 92 chr10 31952801 31953096 -113636192 - L2 LINE L2 -12 3260 2972 355 288 170 7 chr10 31953192 31953345 -113635943 + MER5A DNA MER1_type 9 186 -3 405 204 14 84 chr10 31953507 31953649 -113635639 + MER104 DNA Tc2 1 132 -48 794 181 20 7 chr10 31954633 31954782 -113634506 - FRAM SINE Alu -16 160 10 1313 261 46 67 chr10 31954962 31955125 -113634163 + MLT1J LTR MaLR 1 166 -345 999 228 119 13 chr10 31955125 31955436 -113633852 + MER2 DNA MER2_type 1 344 0 1313 261 46 67 chr10 31955436 31955794 -113633494 + MLT1J LTR MaLR 166 511 0 320 320 73 8 chr10 31955873 31956018 -113633270 + MIR SINE MIR 12 163 -45 1010 122 32 79 chr10 31956131 31956257 -113633031 - Tigger4(Zombi) DNA MER2_type -3 2728 2612 2104 114 0 3 chr10 31956257 31956554 -113632734 - AluSx SINE Alu -16 296 1 1010 122 32 79 chr10 31956554 31956616 -113632672 - Tigger4(Zombi) DNA MER2_type -119 2612 2549 218 222 0 0 chr10 31956874 31956919 -113632369 + (TA)n Simple_repeat Simple_repeat 2 46 0 936 223 112 66 chr10 31956989 31957425 -113631863 - MLT1C LTR MaLR 0 467 1 2338 72 0 3 chr10 31957625 31957929 -113631359 - AluY SINE Alu -8 303 1 944 154 17 23 chr10 31959105 31959280 -113630008 + FRAM SINE Alu 1 169 -7 384 298 0 19 chr10 31959280 31959384 -113629904 + MER5A DNA MER1_type 60 161 -28 526 217 21 122 chr10 31959423 31959612 -113629676 - MER5B DNA MER1_type -6 172 3 786 178 81 35 chr10 31959621 31959795 -113629493 + MER5A DNA MER1_type 4 185 -4 184 128 26 77 chr10 31959879 31959918 -113629370 - MER5A DNA MER1_type -151 38 2 1626 175 17 0 chr10 31959949 31960241 -113629047 - AluJo SINE Alu -15 297 1 294 29 0 0 chr10 31962796 31962831 -113626457 + (CAG)n Simple_repeat Simple_repeat 2 36 0 1303 159 8 21 chr10 31964500 31964739 -113624549 - AluJb SINE Alu -18 294 59 366 23 0 0 chr10 31964828 31964871 -113624417 + (TCCCC)n Simple_repeat Simple_repeat 1 43 0 2129 92 7 0 chr10 31964872 31965165 -113624123 - AluSx SINE Alu -17 295 1 2686 13 0 0 chr10 31965174 31965477 -113623811 - AluYa5 SINE Alu -8 303 1 229 207 69 17 chr10 31965479 31965537 -113623751 + MER5A DNA MER1_type 129 189 0 539 301 54 6 chr10 31965635 31965801 -113623487 - MER5B DNA MER1_type -2 176 3 365 223 91 66 chr10 31966003 31966124 -113623164 - L1ME4a LINE L1 -4 6117 5994 569 277 20 7 chr10 31966251 31966399 -113622889 - MIR SINE MIR -22 240 91 555 280 127 34 chr10 31966396 31966632 -113622656 - MIR SINE MIR -2 260 3 * 344 311 197 12 chr10 31966705 31967030 -113622258 - L1ME4a LINE L1 -345 5776 5392 1945 123 3 0 chr10 31967365 31967649 -113621639 + AluSx SINE Alu 1 285 -27 273 57 0 0 chr10 31967653 31967688 -113621600 + (TAA)n Simple_repeat Simple_repeat 3 37 0 2129 103 0 19 chr10 31969585 31969896 -113619392 + AluSq SINE Alu 1 305 -8 189 0 0 0 chr10 31971358 31971379 -113617909 + (A)n Simple_repeat Simple_repeat 1 21 0 234 169 34 34 chr10 31971814 31971830 -113617458 + GA-rich Low_complexity Low_complexity 2 17 -43 1743 137 19 19 chr10 31971830 31972137 -113617151 + AluJo SINE Alu 6 312 0 234 169 34 34 chr10 31972137 31972179 -113617109 + GA-rich Low_complexity Low_complexity 16 60 0 220 297 55 11 chr10 31972841 31972932 -113616356 + MIR SINE MIR 117 211 -51 383 321 44 28 chr10 31973165 31973414 -113615874 + MIR SINE MIR 8 260 -2 200 238 48 0 chr10 31973960 31974002 -113615286 - L2 LINE L2 0 3272 3229 228 35 0 0 chr10 31975396 31975425 -113613863 + (TG)n Simple_repeat Simple_repeat 2 30 0 1245 208 202 18 chr10 31977331 31977658 -113611630 + MSTD LTR MaLR 2 388 -8 24 0 0 0 chr10 31978101 31978125 -113611163 + AT_rich Low_complexity Low_complexity 1 24 0 235 204 19 37 chr10 31980147 31980201 -113609087 - L2 LINE L2 -18 3295 3243 1835 158 18 0 chr10 31980233 31980517 -113608771 + AluJo SINE Alu 1 289 -23 2301 93 26 0 chr10 31980520 31980822 -113608466 + AluSg SINE Alu 1 310 0 2197 105 0 7 chr10 31981995 31982291 -113606997 - AluSq SINE Alu -19 294 1 293 200 188 0 chr10 31983226 31983311 -113605977 + L2 LINE L2 3210 3310 -3 1998 159 3 0 chr10 31983457 31983766 -113605522 + AluSx SINE Alu 1 310 -2 295 268 178 38 chr10 31984268 31984481 -113604807 - MIR SINE MIR -2 260 18 404 82 16 0 chr10 31984671 31984732 -113604556 + (CA)n Simple_repeat Simple_repeat 1 62 0 296 190 38 76 chr10 31985712 31985791 -113603497 + MIR3 SINE MIR 110 185 -23 988 258 65 90 chr10 31986405 31986702 -113602586 + L1ME4a LINE L1 5315 5618 -503 1825 160 7 3 chr10 31986702 31987016 -113602272 + AluSx SINE Alu 1 315 0 988 258 65 90 chr10 31987016 31987204 -113602084 + L1ME4a LINE L1 5618 5809 -312 1873 149 21 10 chr10 31987204 31987492 -113601796 + AluSx SINE Alu 1 291 -21 988 258 65 90 chr10 31987492 31987728 -113601560 + L1ME4a LINE L1 5809 6018 -103 436 119 15 0 chr10 31987789 31987856 -113601432 - MER116 DNA Mariner 0 80 13 21 0 0 0 chr10 31987929 31987950 -113601338 + AT_rich Low_complexity Low_complexity 1 21 0 2574 24 7 3 chr10 31988099 31988392 -113600896 - AluY SINE Alu -17 294 1 208 311 0 0 chr10 31991751 31991825 -113597463 + G-rich Low_complexity Low_complexity 3 76 0 270 116 23 0 chr10 31992300 31992343 -113596945 - Alu SINE Alu -258 44 1 2588 65 0 0 chr10 31992584 31992890 -113596398 + AluY SINE Alu 1 306 -5 1611 153 4 8 chr10 31993394 31993649 -113595639 - AluJo SINE Alu -10 302 49 3543 128 40 27 chr10 31993987 31994241 -113595047 - MER7C DNA MER2_type -2426 602 353 2233 129 0 0 chr10 31994241 31994543 -113594745 + AluSq SINE Alu 1 302 -11 3543 128 40 27 chr10 31994543 31994880 -113594408 - MER7C DNA MER2_type -2675 353 3 1635 153 38 29 chr10 31995810 31996087 -113593201 + MER33 DNA MER1_type 1 283 -2302 1735 145 43 18 chr10 31996087 31996369 -113592919 + AluJo SINE Alu 1 289 -23 1635 153 38 29 chr10 31996369 31996405 -113592883 + MER33 DNA MER1_type 283 317 -7 2215 129 7 0 chr10 31997221 31997531 -113591757 - AluSx SINE Alu 0 312 1 3719 138 18 68 chr10 31997645 31998192 -113591096 - L1MA9 LINE L1 0 6312 5816 2493 80 0 3 chr10 31998192 31998504 -113590784 - AluSp SINE Alu -2 311 1 3719 138 18 68 chr10 31998504 31998752 -113590536 - L1MA9 LINE L1 -496 5816 5557 203 88 29 0 chr10 31999270 31999304 -113589984 + (GAA)n Simple_repeat Simple_repeat 2 36 0 303 222 0 0 chr10 32001156 32001237 -113588051 + CT-rich Low_complexity Low_complexity 3 83 0 207 291 0 0 chr10 32001240 32001295 -113587993 + T-rich Low_complexity Low_complexity 2 56 0 248 333 0 0 chr10 32001752 32001827 -113587461 + (TA)n Simple_repeat Simple_repeat 2 76 0 993 166 0 0 chr10 32004267 32004418 -113584870 - AluJ SINE Alu -28 284 134 253 323 136 19 chr10 32005627 32005782 -113583506 + MIR3 SINE MIR 27 199 -9 824 138 8 15 chr10 32006479 32006609 -113582679 - AluJ SINE Alu -173 129 1 2089 120 11 0 chr10 32006659 32006943 -113582345 - AluSp SINE Alu -26 287 1 431 142 123 38 chr10 32007013 32007055 -113582233 + Tigger4(Zombi) DNA MER2_type 1 38 -323 2304 86 0 23 chr10 32007055 32007359 -113581929 - AluY SINE Alu -14 297 1 431 142 123 38 chr10 32007359 32007422 -113581866 + Tigger4(Zombi) DNA MER2_type 38 115 -246 223 263 0 11 chr10 32007777 32007952 -113581336 + (CA)n Simple_repeat Simple_repeat 2 174 0 230 95 24 0 chr10 32008010 32008052 -113581236 + (CA)n Simple_repeat Simple_repeat 2 44 0 259 221 229 0 chr10 32008577 32008699 -113580589 - MIR SINE MIR -3 259 110 363 292 93 25 chr10 32008953 32009114 -113580174 + MIR SINE MIR 28 199 -63 2285 109 3 0 chr10 32009160 32009471 -113579817 + AluSx SINE Alu 1 312 0 2512 120 17 3 chr10 32010432 32010791 -113578497 - THE1B LTR MaLR 0 364 1 1719 102 22 25 chr10 32011525 32011632 -113577656 - L1MA6 LINE L1 -6 6294 6188 2488 105 21 103 chr10 32011632 32011713 -113577575 + MSTC LTR MaLR 1 87 -341 1942 151 3 0 chr10 32011713 32012004 -113577284 - AluSg SINE Alu -18 292 1 2488 105 21 103 chr10 32012004 32012387 -113576901 + MSTC LTR MaLR 87 427 -1 1719 102 22 25 chr10 32012387 32012553 -113576735 - L1MA6 LINE L1 -112 6188 6022 2478 92 0 0 chr10 32012565 32012869 -113576419 - AluSg SINE Alu -6 304 1 1334 218 66 3 chr10 32012960 32013295 -113575993 + L1MA4 LINE L1 5945 6300 0 1779 178 3 0 chr10 32013407 32013700 -113575588 - AluJo SINE Alu -18 294 1 309 303 15 77 chr10 32013734 32013929 -113575359 + MER5A DNA MER1_type 4 186 -3 1493 165 129 0 chr10 32014649 32014921 -113574367 + AluSx SINE Alu 1 307 -5 1044 196 0 0 chr10 32014923 32015086 -113574202 + AluJo/FRAM SINE Alu 137 299 -13 521 130 13 0 chr10 32015223 32015300 -113573988 - AluS SINE Alu -234 79 2 1901 162 55 0 chr10 32015419 32015747 -113573541 - MER7A DNA MER2_type 0 346 3 2327 100 3 7 chr10 32015780 32016089 -113573199 + AluSq SINE Alu 1 308 -5 1245 239 51 20 chr10 32016379 32016769 -113572519 + MER74B LTR ERVL 211 612 -10 1286 144 116 72 chr10 32016989 32017266 -113572022 + AluJo SINE Alu 1 289 -23 1097 130 0 0 chr10 32017357 32017511 -113571777 + AluJb SINE Alu 142 295 -17 192 40 0 0 chr10 32018558 32018583 -113570705 + (TTG)n Simple_repeat Simple_repeat 2 26 0 2196 118 3 0 chr10 32018585 32018874 -113570414 - AluSx SINE Alu -18 294 5 1862 106 99 0 chr10 32019196 32019469 -113569819 + AluSx SINE Alu 1 300 -12 276 81 23 69 chr10 32019780 32019867 -113569421 + (GGGAA)n Simple_repeat Simple_repeat 2 84 0 231 274 68 14 chr10 32020298 32020328 -113568960 + MER5A DNA MER1_type 110 137 -52 1993 120 46 0 chr10 32020328 32020611 -113568677 - AluSg SINE Alu -14 296 1 231 274 68 14 chr10 32020611 32020653 -113568635 + MER5A DNA MER1_type 137 186 -3 350 291 126 22 chr10 32020844 32021026 -113568262 + MIR SINE MIR 23 223 -39 824 68 0 8 chr10 32021321 32021438 -113567850 + (TTCC)n Simple_repeat Simple_repeat 4 119 0 1726 161 10 17 chr10 32022464 32022763 -113566525 - AluJo SINE Alu -15 297 1 2343 91 0 10 chr10 32023703 32024000 -113565288 - AluSx SINE Alu -18 294 1 1143 161 11 0 chr10 32024948 32025128 -113564160 - AluSg/x SINE Alu -10 300 119 3721 174 45 4 chr10 32025129 32025824 -113563464 - L1MB4 LINE L1 -42 6138 5416 200 61 61 0 chr10 32026068 32026101 -113563187 + CT-rich Low_complexity Low_complexity 2 36 0 1977 66 55 0 chr10 32026788 32027045 -113562243 + AluY SINE Alu 35 305 -6 234 259 0 17 chr10 32028945 32029003 -113560285 - MLT1K LTR MaLR 0 588 532 2200 116 7 0 chr10 32029106 32029407 -113559881 - AluSx SINE Alu -9 303 1 21 36 0 0 chr10 32030030 32030058 -113559230 + AT_rich Low_complexity Low_complexity 1 28 0 2128 125 3 16 chr10 32030112 32030245 -113559043 + AluSc SINE Alu 1 134 -175 2384 105 3 6 chr10 32030245 32030559 -113558729 + AluSp SINE Alu 1 313 0 2128 125 3 16 chr10 32030559 32030736 -113558552 + AluSc SINE Alu 134 307 -2 269 233 8 125 chr10 32030872 32030992 -113558296 - MIR SINE MIR -61 147 42 1504 184 53 3 chr10 32031421 32031704 -113557584 + AluJo SINE Alu 1 297 -15 621 206 5 14 chr10 32031704 32031914 -113557374 + GA-rich Low_complexity Low_complexity 1 207 0 1346 222 104 64 chr10 32032009 32032457 -113556831 + MLT2B1 LTR ERVL 1 472 -48 666 85 0 0 chr10 32032457 32032551 -113556737 + (TCTA)n Simple_repeat Simple_repeat 1 94 0 1346 222 104 64 chr10 32032551 32032601 -113556687 + MLT2B1 LTR ERVL 472 519 -1 57 28 0 0 chr10 32033754 32033825 -113555463 + AT_rich Low_complexity Low_complexity 1 71 0 2131 116 14 0 chr10 32034836 32035130 -113554158 + AluSx SINE Alu 1 298 -14 189 365 153 0 chr10 32036279 32036416 -113552872 + L2 LINE L2 3099 3256 -16 310 230 53 0 chr10 32036968 32037069 -113552219 + MIR SINE MIR 103 211 -51 387 200 207 29 chr10 32037808 32037948 -113551340 - MER3 DNA MER1_type 0 209 45 1964 126 9 49 chr10 32038132 32038457 -113550831 + AluSx SINE Alu 1 312 0 408 261 67 39 chr10 32040142 32040322 -113548966 - L2 LINE L2 -9 3304 3120 1973 201 88 36 chr10 32040377 32040898 -113548390 + LTR10A LTR ERV1 1 548 -61 277 45 91 0 chr10 32040954 32040998 -113548290 - MER4B LTR ERV1 0 779 732 2104 87 7 14 chr10 32041007 32041349 -113547939 - AluSx SINE Alu 0 340 1 2962 119 34 12 chr10 32041398 32041792 -113547496 - MER4B LTR ERV1 -31 748 172 2144 108 3 7 chr10 32041792 32042080 -113547208 + AluSg SINE Alu 1 287 -23 2962 119 34 12 chr10 32042080 32042182 -113547106 - MER4B LTR ERV1 -607 172 74 25 0 0 0 chr10 32042182 32042207 -113547081 + AT_rich Low_complexity Low_complexity 1 25 0 968 104 0 0 chr10 32042207 32042332 -113546956 - AluSq/x SINE Alu -187 125 1 597 107 0 0 chr10 32042332 32042416 -113546872 - MER4B LTR ERV1 -526 84 1 2924 150 25 47 chr10 32042782 32042837 -113546451 - L1MB1 LINE L1 -17 6172 6117 2117 128 3 10 chr10 32042837 32043135 -113546153 - AluSx SINE Alu -16 296 1 2924 150 25 47 chr10 32043135 32043379 -113545909 - L1MB1 LINE L1 -72 6117 5888 2810 97 0 0 chr10 32043379 32043741 -113545547 - THE1B LTR MaLR 0 364 3 2924 150 25 47 chr10 32043741 32043999 -113545289 - L1MB1 LINE L1 -301 5888 5626 392 117 17 0 chr10 32044002 32044062 -113545226 + L1MB1 LINE L1 5572 5632 -551 231 61 0 0 chr10 32044278 32044311 -113544977 + (CA)n Simple_repeat Simple_repeat 2 34 0 1341 93 11 6 chr10 32044392 32044574 -113544714 - AluSp SINE Alu -7 306 124 2845 103 23 16 chr10 32044976 32045403 -113543885 + L1PA16 LINE L1 5728 6157 -9 243 0 0 0 chr10 32045447 32045474 -113543814 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 422 264 25 0 chr10 32045608 32045729 -113543559 - MIR SINE MIR -44 218 95 1802 111 115 7 chr10 32046007 32046277 -113543011 - AluSg SINE Alu 0 310 12 1860 138 24 34 chr10 32046805 32047103 -113542185 + AluJo SINE Alu 1 295 -17 2130 108 0 0 chr10 32047196 32047465 -113541823 - AluSx SINE Alu -43 269 1 4213 138 6 2 chr10 32047785 32048417 -113540871 + MER41B LTR ERV1 1 635 0 2276 108 3 0 chr10 32048695 32048991 -113540297 + AluSq SINE Alu 1 297 -16 530 91 0 26 chr10 32051962 32052039 -113537249 - FLAM_A SINE Alu -18 124 50 292 247 70 119 chr10 32052103 32052330 -113536958 - L2 LINE L2 -1 3312 3097 3979 186 18 35 chr10 32052347 32052856 -113536432 + L1MB5 LINE L1 5364 5880 -294 1707 163 0 52 chr10 32052856 32053181 -113536107 + AluJo SINE Alu 1 308 -4 3979 186 18 35 chr10 32053181 32053254 -113536034 + L1MB5 LINE L1 5880 5953 -221 2313 113 0 0 chr10 32053254 32053555 -113535733 + AluSx SINE Alu 1 301 -11 3979 186 18 35 chr10 32053555 32053790 -113535498 + L1MB5 LINE L1 5953 6168 -6 215 283 0 0 chr10 32053826 32053886 -113535402 - L2 LINE L2 -245 3068 3009 2438 84 7 0 chr10 32053933 32054242 -113535046 + AluSx SINE Alu 1 311 -1 2343 91 0 10 chr10 32055211 32055508 -113533780 - AluSx SINE Alu -18 294 1 1143 161 11 0 chr10 32056456 32056636 -113532652 - AluSg/x SINE Alu -10 300 119 3713 177 43 4 chr10 32056637 32057333 -113531955 - L1MB4 LINE L1 -42 6138 5416 200 61 61 0 chr10 32057577 32057610 -113531678 + CT-rich Low_complexity Low_complexity 2 36 0 1977 66 55 0 chr10 32058296 32058553 -113530735 + AluY SINE Alu 35 305 -6 234 259 0 17 chr10 32060452 32060510 -113528778 - MLT1K LTR MaLR 0 588 532 2200 116 7 0 chr10 32060613 32060914 -113528374 - AluSx SINE Alu -9 303 1 21 36 0 0 chr10 32061537 32061565 -113527723 + AT_rich Low_complexity Low_complexity 1 28 0 2116 125 3 22 chr10 32061619 32061752 -113527536 + AluSc SINE Alu 1 135 -174 2399 109 3 0 chr10 32061752 32062064 -113527224 + AluSp SINE Alu 1 313 0 2116 125 3 22 chr10 32062064 32062243 -113527045 + AluSc SINE Alu 135 307 -2 269 233 8 125 chr10 32062379 32062499 -113526789 - MIR SINE MIR -61 147 42 1504 184 53 3 chr10 32062928 32063211 -113526077 + AluJo SINE Alu 1 297 -15 621 206 5 14 chr10 32063211 32063421 -113525867 + GA-rich Low_complexity Low_complexity 1 207 0 1346 222 104 64 chr10 32063516 32063964 -113525324 + MLT2B1 LTR ERVL 1 472 -48 666 85 0 0 chr10 32063964 32064058 -113525230 + (TCTA)n Simple_repeat Simple_repeat 1 94 0 1346 222 104 64 chr10 32064058 32064108 -113525180 + MLT2B1 LTR ERVL 472 519 -1 57 28 0 0 chr10 32065261 32065332 -113523956 + AT_rich Low_complexity Low_complexity 1 71 0 2207 117 13 0 chr10 32066343 32066651 -113522637 + AluSx SINE Alu 1 312 0 180 0 0 0 chr10 32067025 32067045 -113522243 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 2152 109 0 0 chr10 32067046 32067321 -113521967 - AluSc SINE Alu -34 275 1 2056 111 0 33 chr10 32067868 32068174 -113521114 + AluSx SINE Alu 1 296 -16 342 0 0 0 chr10 32068696 32068734 -113520554 + (TG)n Simple_repeat Simple_repeat 2 39 0 2118 131 3 0 chr10 32069442 32069739 -113519549 + AluSx SINE Alu 1 298 -14 273 57 0 0 chr10 32069739 32069774 -113519514 + (GGGGA)n Simple_repeat Simple_repeat 1 35 0 521 184 31 0 chr10 32070607 32070705 -113518583 - FLAM_A SINE Alu 0 142 42 234 0 0 0 chr10 32070897 32070923 -113518365 + (T)n Simple_repeat Simple_repeat 1 26 0 2323 96 0 34 chr10 32070924 32071247 -113518041 + AluSx SINE Alu 1 312 0 356 81 0 16 chr10 32071247 32071309 -113517979 + (TA)n Simple_repeat Simple_repeat 2 62 0 1959 136 3 40 chr10 32073342 32073665 -113515623 + AluSx SINE Alu 1 311 -1 189 365 153 0 chr10 32074797 32074934 -113514354 + L2 LINE L2 3099 3256 -16 310 230 53 0 chr10 32075486 32075587 -113513701 + MIR SINE MIR 103 211 -51 387 200 207 29 chr10 32076326 32076466 -113512822 - MER3 DNA MER1_type 0 209 45 1964 126 9 49 chr10 32076650 32076975 -113512313 + AluSx SINE Alu 1 312 0 408 261 67 39 chr10 32078660 32078840 -113510448 - L2 LINE L2 -9 3304 3120 1973 201 88 36 chr10 32078895 32079416 -113509872 + LTR10A LTR ERV1 1 548 -61 277 45 91 0 chr10 32079472 32079516 -113509772 - MER4B LTR ERV1 0 766 719 2104 87 7 14 chr10 32079525 32079867 -113509421 - AluSx SINE Alu 0 340 1 2962 119 34 12 chr10 32079916 32080310 -113508978 - MER4B LTR ERV1 -31 748 172 2144 108 3 7 chr10 32080310 32080598 -113508690 + AluSg SINE Alu 1 287 -23 2962 119 34 12 chr10 32080598 32080700 -113508588 - MER4B LTR ERV1 -607 172 74 25 0 0 0 chr10 32080700 32080725 -113508563 + AT_rich Low_complexity Low_complexity 1 25 0 968 104 0 0 chr10 32080725 32080850 -113508438 - AluSq/x SINE Alu -188 125 1 597 107 0 0 chr10 32080850 32080934 -113508354 - MER4B LTR ERV1 -526 84 1 1554 124 27 60 chr10 32081303 32081355 -113507933 - L1MB1 LINE L1 -1 6167 6115 2117 128 3 10 chr10 32081355 32081653 -113507635 - AluSx SINE Alu -16 296 1 1554 124 27 60 chr10 32081653 32081897 -113507391 - L1MB1 LINE L1 -53 6115 5881 2810 97 0 0 chr10 32081897 32082259 -113507029 - THE1B LTR MaLR 0 364 3 2924 150 25 47 chr10 32082259 32082517 -113506771 - L1MB1 LINE L1 -382 5807 5626 392 117 17 0 chr10 32082520 32082580 -113506708 + L1MB1 LINE L1 5572 5632 -551 231 61 0 0 chr10 32082796 32082829 -113506459 + (CA)n Simple_repeat Simple_repeat 2 34 0 1341 93 11 6 chr10 32082910 32083092 -113506196 - AluSp SINE Alu -7 306 124 2845 103 23 16 chr10 32083494 32083921 -113505367 + L1PA16 LINE L1 5728 6157 -9 243 0 0 0 chr10 32083965 32083992 -113505296 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 422 264 25 0 chr10 32084126 32084247 -113505041 - MIR SINE MIR -44 218 95 1802 111 115 7 chr10 32084525 32084795 -113504493 - AluSg SINE Alu 0 310 12 1860 138 24 34 chr10 32085323 32085621 -113503667 + AluJo SINE Alu 1 295 -17 2130 108 0 0 chr10 32085714 32085983 -113503305 - AluSx SINE Alu -43 269 1 4213 138 6 2 chr10 32086303 32086935 -113502353 + MER41B LTR ERV1 1 635 0 2276 108 3 0 chr10 32087213 32087509 -113501779 + AluSq SINE Alu 1 297 -16 530 91 0 26 chr10 32090480 32090557 -113498731 - FLAM SINE Alu -18 125 51 292 247 70 119 chr10 32090621 32090848 -113498440 - L2 LINE L2 -1 3312 3097 3979 186 18 35 chr10 32090865 32091374 -113497914 + L1MB5 LINE L1 5364 5880 -294 1707 163 0 52 chr10 32091374 32091699 -113497589 + AluJo SINE Alu 1 308 -4 3979 186 18 35 chr10 32091699 32091772 -113497516 + L1MB5 LINE L1 5880 5953 -221 2313 113 0 0 chr10 32091772 32092073 -113497215 + AluSx SINE Alu 1 301 -11 3979 186 18 35 chr10 32092073 32092308 -113496980 + L1MB5 LINE L1 5953 6168 -6 215 283 0 0 chr10 32092344 32092404 -113496884 - L2 LINE L2 -245 3068 3009 2438 84 7 0 chr10 32092451 32092760 -113496528 + AluSx SINE Alu 1 311 -1 474 205 18 27 chr10 32093466 32093578 -113495710 - FLAM_C SINE Alu -18 125 15 193 342 25 0 chr10 32093584 32093663 -113495625 + MIR SINE MIR 67 147 -61 198 0 0 0 chr10 32094159 32094181 -113495107 + (A)n Simple_repeat Simple_repeat 1 22 0 423 66 40 0 chr10 32094407 32094483 -113494805 + (TAGA)n Simple_repeat Simple_repeat 4 82 0 198 0 0 0 chr10 32095587 32095609 -113493679 + (TG)n Simple_repeat Simple_repeat 1 22 0 2249 102 7 7 chr10 32096318 32096622 -113492666 + AluSq SINE Alu 1 304 -9 894 264 10 5 chr10 32096622 32096830 -113492458 + MER58A DNA MER1_type 4 212 -12 221 400 40 0 chr10 32097288 32097388 -113491900 + L2 LINE L2 3121 3224 -48 337 311 80 50 chr10 32098050 32098288 -113491000 + LTR67 LTR ERVL 23 267 -290 319 301 77 14 chr10 32098381 32098524 -113490764 + LTR67 LTR ERVL 392 543 -14 853 238 159 56 chr10 32098781 32099110 -113490178 + LTR33A LTR ERVL 88 467 -56 2148 116 0 0 chr10 32099110 32099421 -113489867 - AluSx SINE Alu 0 311 1 853 238 159 56 chr10 32099421 32099485 -113489803 + LTR33A LTR ERVL 467 523 0 225 0 0 0 chr10 32099747 32099772 -113489516 + (A)n Simple_repeat Simple_repeat 1 25 0 2118 136 0 0 chr10 32099772 32100066 -113489222 + AluSx SINE Alu 1 294 -18 1124 123 12 6 chr10 32100605 32100775 -113488513 - AluSc SINE Alu -16 293 123 207 170 0 64 chr10 32100799 32100815 -113488473 + CT-rich Low_complexity Low_complexity 5 20 -28 2217 122 36 31 chr10 32100815 32101175 -113488113 + THE1B LTR MaLR 1 362 -2 207 170 0 64 chr10 32101175 32101205 -113488083 + CT-rich Low_complexity Low_complexity 20 48 0 2180 120 108 57 chr10 32101432 32101839 -113487449 - MSTA LTR MaLR 0 428 1 340 268 12 0 chr10 32101928 32102010 -113487278 - MIR SINE MIR -72 136 54 2346 47 0 7 chr10 32102370 32102648 -113486640 + AluY SINE Alu 31 306 -5 181 283 38 47 chr10 32102654 32102760 -113486528 + MIR SINE MIR 133 237 -25 2562 70 0 6 chr10 32102945 32103258 -113486030 - AluY SINE Alu 0 311 1 2241 100 0 39 chr10 32103318 32103627 -113485661 - AluSx SINE Alu -15 297 1 201 83 56 0 chr10 32104029 32104065 -113485223 + (TG)n Simple_repeat Simple_repeat 1 38 0 612 113 10 10 chr10 32104118 32104215 -113485073 + MER4A LTR ERV1 1 97 -567 * 1810 138 156 77 chr10 32104212 32104590 -113484698 + MER4A LTR ERV1 257 664 0 245 320 40 32 chr10 32104812 32104937 -113484351 + L2 LINE L2 3137 3262 -10 292 262 10 48 chr10 32105740 32105843 -113483445 - MER5A DNA MER1_type -2 187 89 24 0 0 0 chr10 32105843 32105867 -113483421 + AT_rich Low_complexity Low_complexity 1 24 0 2184 100 4 0 chr10 32105880 32106159 -113483129 + AluSq SINE Alu 1 280 -33 1495 206 0 34 chr10 32106206 32106498 -113482790 - AluJo SINE Alu -30 282 1 2464 70 0 0 chr10 32107497 32107797 -113481491 + AluSg SINE Alu 1 300 -10 263 306 123 55 chr10 32108163 32108545 -113480743 + L3b LINE CR1 1167 1574 -9 644 285 52 27 chr10 32108568 32108788 -113480500 - MIR SINE MIR 0 262 38 2186 169 49 24 chr10 32108893 32109018 -113480270 - L1MA9 LINE L1 0 6312 6192 2111 142 0 0 chr10 32109018 32109327 -113479961 - AluSx SINE Alu -3 309 1 2186 169 49 24 chr10 32109327 32109667 -113479621 - L1MA9 LINE L1 -120 6192 5835 2546 55 0 3 chr10 32110227 32110539 -113478749 + AluY SINE Alu 1 311 0 2329 109 0 13 chr10 32110898 32111211 -113478077 - AluSc SINE Alu 0 309 1 1262 198 60 14 chr10 32111850 32112133 -113477155 + AluJo SINE Alu 3 298 -14 1896 159 16 13 chr10 32112628 32113040 -113476248 + AluSq SINE Alu 3 415 0 243 88 0 0 chr10 32114557 32114591 -113474697 + (CA)n Simple_repeat Simple_repeat 1 34 0 210 206 27 27 chr10 32114607 32114680 -113474608 + (CA)n Simple_repeat Simple_repeat 1 73 0 23 33 0 0 chr10 32114681 32114711 -113474577 + AT_rich Low_complexity Low_complexity 1 30 0 2298 87 3 0 chr10 32114713 32115001 -113474287 - AluSx SINE Alu -22 290 2 348 314 25 13 chr10 32115033 32115192 -113474096 - MIR SINE MIR -13 249 89 1968 150 0 3 chr10 32115705 32116005 -113473283 + AluJo SINE Alu 5 303 -9 2250 101 0 22 chr10 32116360 32116677 -113472611 - AluSx SINE Alu -2 310 1 1832 140 19 48 chr10 32116678 32116993 -113472295 - AluJo SINE Alu -4 308 3 270 309 0 12 chr10 32117527 32117611 -113471677 - L2 LINE L2 0 3272 3190 2218 123 0 3 chr10 32117867 32118176 -113471112 - AluSx SINE Alu -4 308 1 821 147 8 0 chr10 32119078 32119207 -113470081 - FLAM_C SINE Alu -3 130 1 1925 176 3 0 chr10 32119301 32119603 -113469685 + AluSx SINE Alu 1 303 -9 1034 250 89 0 chr10 32119643 32119891 -113469397 + Charlie1a DNA MER1_type 6 275 -1180 1028 154 12 0 chr10 32119903 32120065 -113469223 + FRAM SINE Alu 4 167 -9 233 132 19 19 chr10 32120070 32120123 -113469165 + Charlie1a DNA MER1_type 279 331 -1124 * 2189 152 140 64 chr10 32120120 32120248 -113469040 + Charlie1a DNA MER1_type 847 964 -1797 1722 123 0 76 chr10 32120248 32120581 -113468707 - AluSx SINE Alu 0 315 6 2189 152 140 64 chr10 32120581 32121017 -113468271 + Charlie1a DNA MER1_type 964 1455 0 776 189 16 53 chr10 32121646 32121777 -113467511 + MER5A DNA MER1_type 6 129 -60 2290 109 0 7 chr10 32121777 32122080 -113467208 - AluSx SINE Alu -11 301 1 776 189 16 53 chr10 32122080 32122138 -113467150 + MER5A DNA MER1_type 129 188 -1 1816 176 3 10 chr10 32123150 32123446 -113465842 + AluJo SINE Alu 1 294 -18 649 242 0 0 chr10 32123683 32123815 -113465473 + FLAM_A SINE Alu 1 132 -1 1157 206 64 103 chr10 32124181 32124371 -113464917 + MLT1B LTR MaLR 14 183 -207 315 0 0 0 chr10 32124371 32124406 -113464882 + (CA)n Simple_repeat Simple_repeat 1 35 0 1157 206 64 103 chr10 32124406 32124603 -113464685 + MLT1B LTR MaLR 183 386 -4 377 236 114 29 chr10 32124630 32124770 -113464518 - LTR67 LTR ERVL 0 557 406 609 241 97 5 chr10 32125675 32125870 -113463418 - HsTC2 DNA Tc2 -12 1886 1674 14880 175 52 21 chr10 32125922 32128901 -113460387 - L1PB1 LINE L1 0 6867 3981 210 37 0 0 chr10 32128901 32128928 -113460360 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 14880 175 52 21 chr10 32128928 32131994 -113457294 - L1PB1 LINE L1 -2886 3981 634 1237 127 5 0 chr10 32131994 32132191 -113457097 - L1PB1 LINE L1 -6663 200 3 1049 254 39 58 chr10 32132193 32132289 -113456999 - HsTC2 DNA Tc2 -277 1621 1525 2387 79 13 0 chr10 32132289 32132594 -113456694 - AluY SINE Alu -2 309 1 1049 254 39 58 chr10 32132594 32132856 -113456432 - HsTC2 DNA Tc2 -373 1525 1270 331 293 41 24 chr10 32132874 32132997 -113456291 - HsTC2 DNA Tc2 -1764 134 10 4364 109 11 11 chr10 32133124 32133736 -113455552 - LTR9 LTR ERV1 0 612 1 2578 138 18 35 chr10 32134180 32134615 -113454673 - MSTA LTR MaLR 0 428 1 819 225 48 66 chr10 32135891 32136110 -113453178 + MLT1E3 LTR MaLR 131 405 -219 2240 124 0 6 chr10 32136110 32136424 -113452864 + AluSx SINE Alu 1 312 0 819 225 48 66 chr10 32136424 32136501 -113452787 + MLT1E3 LTR MaLR 405 482 -142 1735 189 3 6 chr10 32136551 32136864 -113452424 - AluJo SINE Alu 0 312 1 472 264 28 38 chr10 32137045 32137490 -113451798 - L1M LINE L1 -743 5403 4982 734 306 125 72 chr10 32137495 32137610 -113451678 + L2 LINE L2 1824 1931 -1383 605 194 0 62 chr10 32137610 32137739 -113451549 + FLAM_C SINE Alu 2 122 -11 734 306 125 72 chr10 32137739 32137877 -113451411 + L2 LINE L2 1931 2060 -1254 2005 131 46 25 chr10 32137877 32138244 -113451044 + THE1C LTR MaLR 1 375 0 734 306 125 72 chr10 32138244 32138979 -113450309 + L2 LINE L2 2060 2866 -448 616 190 2 9 chr10 32139031 32139151 -113450137 - MLT1C LTR MaLR 0 467 245 3906 107 14 12 chr10 32139181 32139762 -113449526 + L1PA13 LINE L1 5582 6163 0 198 0 0 0 chr10 32140671 32140693 -113448595 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1016 174 92 128 chr10 32140698 32141002 -113448286 - MER51A LTR ERV1 -82 552 3 180 0 0 0 chr10 32141395 32141415 -113447873 + (T)n Simple_repeat Simple_repeat 1 20 0 2334 103 0 0 chr10 32141726 32142018 -113447270 - AluSx SINE Alu -20 292 1 4536 102 110 107 chr10 32142247 32143640 -113445648 + pTR5 LTR ERV1 79 2438 0 1302 174 97 17 chr10 32143976 32144264 -113445024 - AluJo SINE Alu -1 311 1 2088 110 11 0 chr10 32144418 32144721 -113444567 - AluSq SINE Alu 0 306 1 1577 196 0 18 chr10 32145602 32145882 -113443406 - AluJo SINE Alu -17 295 21 1777 133 36 33 chr10 32145890 32146191 -113443097 - AluJb SINE Alu -10 302 1 5599 202 55 77 chr10 32146193 32146697 -113442591 - L1MC3 LINE L1 -216 7569 7056 288 0 0 0 chr10 32146697 32146729 -113442559 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 2183 108 0 0 chr10 32146734 32147011 -113442277 - AluSg SINE Alu -33 277 1 5599 202 55 77 chr10 32147011 32147576 -113441712 - L1MC3 LINE L1 -733 7052 6476 751 187 0 15 chr10 32147576 32147710 -113441578 - FLAM_C SINE Alu -1 132 1 5599 202 55 77 chr10 32147710 32147899 -113441389 - L1MC3 LINE L1 -1309 6476 6284 2391 65 41 0 chr10 32147899 32148191 -113441097 + AluY SINE Alu 1 304 -7 5599 202 55 77 chr10 32148191 32148531 -113440757 - L1MC3 LINE L1 -1501 6284 5998 28 61 0 0 chr10 32148632 32148681 -113440607 + AT_rich Low_complexity Low_complexity 1 49 0 249 196 0 0 chr10 32149323 32149374 -113439914 + (CA)n Simple_repeat Simple_repeat 1 51 0 2484 80 3 3 chr10 32149395 32149707 -113439581 + AluSx SINE Alu 1 312 0 304 326 23 8 chr10 32149853 32149985 -113439303 + GA-rich Low_complexity Low_complexity 4 137 0 245 121 0 0 chr10 32150071 32150104 -113439184 - tRNA-Gly-GGC tRNA tRNA -41 33 1 2212 102 3 10 chr10 32150205 32150499 -113438789 + AluSq SINE Alu 5 296 -17 945 186 150 5 chr10 32150674 32150894 -113438394 + ORSL DNA AcHobo 24 275 0 23 0 0 0 chr10 32151096 32151119 -113438169 + AT_rich Low_complexity Low_complexity 1 23 0 851 153 0 0 chr10 32151119 32151237 -113438051 - FLAM_C SINE Alu -25 118 1 529 263 109 53 chr10 32151845 32152165 -113437123 + L2 LINE L2 2936 3273 -40 186 71 0 0 chr10 32152174 32152202 -113437086 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 235 239 73 55 chr10 32152276 32152385 -113436903 - MIR3 SINE MIR -8 200 90 314 304 26 0 chr10 32152757 32152872 -113436416 - MIR SINE MIR -111 151 34 378 74 0 0 chr10 32153084 32153138 -113436150 + (TG)n Simple_repeat Simple_repeat 2 55 0 1386 175 91 82 chr10 32153162 32153203 -113436085 - L1MC5 LINE L1 -48 7913 7874 1593 180 4 11 chr10 32153203 32153506 -113435782 + AluJb SINE Alu 7 307 0 1386 175 91 82 chr10 32153506 32153960 -113435328 - L1MC5 LINE L1 -87 7874 7413 277 224 0 0 chr10 32153958 32154016 -113435272 - L1MC4a LINE L1 -1884 5924 5867 * 1732 121 8 88 chr10 32154101 32154363 -113434925 - L1MA4 LINE L1 -3 6297 6070 1495 195 17 28 chr10 32154363 32154650 -113434638 - AluJo SINE Alu -15 297 14 1732 121 8 88 chr10 32154650 32154750 -113434538 - L1MA4 LINE L1 -230 6070 5964 623 254 90 92 chr10 32154811 32155147 -113434141 - L1MC4a LINE L1 -2058 5750 5414 840 130 0 8 chr10 32155147 32155270 -113434018 - FLAM_C SINE Alu -11 122 1 623 254 90 92 chr10 32155270 32155389 -113433899 - L1MC4a LINE L1 -2394 5414 5296 2211 105 0 30 chr10 32155547 32155851 -113433437 + AluSx SINE Alu 1 295 -17 352 342 80 13 chr10 32155946 32156171 -113433117 - MLT1I LTR MaLR -7 402 163 293 256 28 3 chr10 32156168 32156268 -113433020 - MLT1I LTR MaLR -270 139 38 * 751 160 0 8 chr10 32157163 32157288 -113432000 + AluJo SINE Alu 11 134 -178 2344 103 0 0 chr10 32157594 32157894 -113431394 + AluSx SINE Alu 1 300 -12 513 326 6 6 chr10 32158233 32158408 -113430880 + MLT1I LTR MaLR 232 406 -3 1117 234 191 37 chr10 32158809 32159129 -113430159 + HAL1 LINE L1 454 870 -1637 2127 103 3 23 chr10 32159129 32159430 -113429858 - AluSx SINE Alu -17 295 1 1117 234 191 37 chr10 32159430 32159574 -113429714 + HAL1 LINE L1 870 990 -1517 32 75 0 0 chr10 32159584 32159651 -113429637 + AT_rich Low_complexity Low_complexity 1 67 0 228 200 0 0 chr10 32160412 32160467 -113428821 + (CA)n Simple_repeat Simple_repeat 2 56 0 380 223 195 8 chr10 32160658 32160821 -113428467 + L1ME LINE L1 5470 5659 -511 2491 58 0 39 chr10 32160829 32161138 -113428150 + AluY SINE Alu 1 297 -14 846 177 19 13 chr10 32161141 32161299 -113427989 + AluJo/FRAM SINE Alu 138 296 -16 198 0 0 0 chr10 32161367 32161389 -113427899 + (A)n Simple_repeat Simple_repeat 1 22 0 279 79 0 0 chr10 32163097 32163135 -113426153 + (TG)n Simple_repeat Simple_repeat 2 39 0 726 184 0 22 chr10 32163770 32163906 -113425382 + FLAM_A SINE Alu 1 133 0 239 93 23 0 chr10 32163907 32163950 -113425338 + (GGAA)n Simple_repeat Simple_repeat 4 47 0 1708 133 0 16 chr10 32164634 32164890 -113424398 + AluSx SINE Alu 1 252 -60 183 42 0 0 chr10 32164906 32164930 -113424358 + (CAA)n Simple_repeat Simple_repeat 1 24 0 1107 161 0 11 chr10 32165303 32165483 -113423805 - FRAM SINE Alu -5 171 1 738 230 48 0 chr10 32165769 32165989 -113423299 - MIR SINE MIR -3 259 31 448 308 11 38 chr10 32166694 32166879 -113422409 + MIR SINE MIR 11 190 -72 308 308 5 43 chr10 32168153 32168364 -113420924 - MER63 DNA MER1_type -7 1681 1 423 144 62 12 chr10 32169413 32169573 -113419715 + (TAGA)n Simple_repeat Simple_repeat 2 169 0 2994 97 0 19 chr10 32169576 32169959 -113419329 - MER57B LTR ERV1 -27 407 31 5070 148 44 35 chr10 32169959 32170904 -113418384 + LTR13 LTR ERVK 1 954 0 2994 97 0 19 chr10 32170904 32170934 -113418354 - MER57B LTR ERV1 -403 31 2 635 46 11 0 chr10 32170934 32171021 -113418267 + (TAGA)n Simple_repeat Simple_repeat 2 89 0 859 271 173 46 chr10 32171083 32171265 -113418023 + MLT1L LTR MaLR 5 162 -453 1976 115 56 7 chr10 32171265 32171553 -113417735 - AluSx SINE Alu -10 302 1 859 271 173 46 chr10 32171553 32171872 -113417416 + MLT1L LTR MaLR 162 570 -45 964 194 106 13 chr10 32171883 32172110 -113417178 - L1MB8 LINE L1 -5 6173 5926 1992 149 10 0 chr10 32172110 32172406 -113416882 - AluSx SINE Alu -13 299 1 779 163 0 0 chr10 32172408 32172543 -113416745 - L1MB8 LINE L1 -352 5822 5688 14773 127 20 15 chr10 32172543 32174734 -113414554 + Tigger1 DNA MER2_type 1 2179 -239 1904 145 10 0 chr10 32174734 32175023 -113414265 - AluSx SINE Alu -18 294 3 14773 127 20 15 chr10 32175023 32175040 -113414248 + Tigger1 DNA MER2_type 2179 2194 -224 1637 88 0 4 chr10 32175040 32175266 -113414022 - L1PB1 LINE L1 0 6151 5927 14773 127 20 15 chr10 32175266 32175359 -113413929 + Tigger1 DNA MER2_type 2194 2315 -103 572 247 54 11 chr10 32175360 32175546 -113413742 - L1MB8 LINE L1 -692 5492 5299 * 6094 114 8 3 chr10 32175522 32176419 -113412869 - L1PA15 LINE L1 -1 6164 5264 1148 158 5 0 chr10 32176408 32176610 -113412678 + L1PA15 LINE L1 5080 5282 -864 * 642 131 56 9 chr10 32176610 32176717 -113412571 + Tigger1 DNA MER2_type 2307 2418 0 305 240 0 1 chr10 32176717 32176798 -113412490 - L1M4 LINE L1 -485 5689 5610 341 293 149 24 chr10 32177006 32177255 -113412033 - LTR50 LTR ERVL -112 683 404 278 278 49 52 chr10 32177600 32177761 -113411527 - LTR50 LTR ERVL -308 215 59 382 287 41 33 chr10 32177779 32177980 -113411308 + MIR SINE MIR 12 212 -50 1520 183 38 14 chr10 32178603 32178892 -113410396 + AluJo SINE Alu 1 296 -16 260 333 58 17 chr10 32179806 32179926 -113409362 + HAL1 LINE L1 8 132 -2375 626 311 56 16 chr10 32180193 32180515 -113408773 - L1MC4a LINE L1 -1881 5927 5593 587 251 51 53 chr10 32180509 32181042 -113408246 - L1MC4 LINE L1 -109 7933 7292 * 343 302 95 42 chr10 32181088 32181353 -113407935 - L1MC4a LINE L1 -515 5606 5336 420 280 85 0 chr10 32181406 32181524 -113407764 - MLT1J2 LTR MaLR -72 378 251 27 0 0 0 chr10 32181874 32181901 -113407387 + AT_rich Low_complexity Low_complexity 1 27 0 195 222 0 0 chr10 32181985 32182030 -113407258 + (CATATA)n Simple_repeat Simple_repeat 2 46 0 410 354 58 23 chr10 32182050 32182395 -113406893 - L1MC4a LINE L1 -1007 5139 4783 2461 74 0 0 chr10 32182625 32182921 -113406367 - AluY SINE Alu -15 296 1 800 273 27 33 chr10 32183345 32183675 -113405613 + L1MEc LINE L1 1552 1879 -4517 1668 156 0 76 chr10 32183678 32183816 -113405472 + AluJo SINE Alu 9 111 -201 1970 147 0 22 chr10 32183816 32184129 -113405159 + AluSx SINE Alu 1 306 -6 1668 156 0 76 chr10 32184129 32184304 -113404984 + AluJo SINE Alu 111 298 -14 781 156 0 43 chr10 32184313 32184434 -113404854 + AluJo SINE Alu 2 118 -194 270 0 0 0 chr10 32184434 32184464 -113404824 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 781 156 0 43 chr10 32184464 32184483 -113404805 + AluJo SINE Alu 118 136 -176 314 368 39 15 chr10 32184484 32184688 -113404600 + L1MEc LINE L1 1883 2091 -4305 326 306 90 37 chr10 32184741 32185057 -113404231 + MLT1I LTR MaLR 80 386 -23 349 273 0 23 chr10 32185165 32185253 -113404035 + L2 LINE L2 3146 3231 -41 3004 177 26 3 chr10 32185253 32185818 -113403470 + L1PA16 LINE L1 5588 6165 -1 417 39 0 0 chr10 32186478 32186529 -113402759 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 325 158 0 0 chr10 32187852 32187909 -113401379 - MIR SINE MIR -21 241 185 204 143 0 0 chr10 32187924 32187966 -113401322 + MIR SINE MIR 170 211 -51 326 281 22 82 chr10 32188183 32188318 -113400970 - MER5B DNA MER1_type 0 178 52 192 111 0 0 chr10 32188321 32188357 -113400931 + (TC)n Simple_repeat Simple_repeat 1 36 0 228 67 0 0 chr10 32188370 32188400 -113400888 + (TG)n Simple_repeat Simple_repeat 2 31 0 2212 126 3 3 chr10 32189269 32189578 -113399710 + AluSx SINE Alu 1 309 -3 1109 301 83 23 chr10 32189858 32190082 -113399206 + LTR67 LTR ERVL 40 249 -308 3167 189 12 67 chr10 32190082 32190813 -113398475 - LTR8 LTR ERV1 0 691 1 1109 301 83 23 chr10 32190813 32191069 -113398219 + LTR67 LTR ERVL 249 549 -8 263 288 119 69 chr10 32191233 32191393 -113397895 + MLT1K LTR MaLR 53 220 -368 434 304 119 22 chr10 32191443 32191670 -113397618 + MLT1K LTR MaLR 332 580 -8 2055 141 0 0 chr10 32191804 32192103 -113397185 + AluSx SINE Alu 4 302 -10 201 336 62 9 chr10 32192116 32192229 -113397059 - L2 LINE L2 -8 3305 3187 2642 171 2 2 chr10 32192348 32192776 -113396512 - MSTA LTR MaLR 0 428 1 1850 147 7 0 chr10 32193991 32194264 -113395024 + AluSx SINE Alu 5 279 -33 234 0 0 0 chr10 32194264 32194290 -113394998 + (CA)n Simple_repeat Simple_repeat 1 26 0 466 244 56 111 chr10 32194312 32194546 -113394742 + MLT1F1 LTR MaLR 1 221 -372 921 217 102 86 chr10 32194617 32194999 -113394289 + MLT1F1 LTR MaLR 180 567 0 446 215 132 57 chr10 32196083 32196311 -113392977 + L1MC4a LINE L1 6058 6302 -1506 789 188 0 0 chr10 32196378 32196511 -113392777 - FLAM_C SINE Alu 0 133 1 1144 235 132 41 chr10 32196622 32197060 -113392228 + MLT2B1 LTR ERVL 3 480 -40 314 162 38 0 chr10 32197071 32197144 -113392144 + (TA)n Simple_repeat Simple_repeat 1 81 -28 1819 159 0 0 chr10 32197144 32197420 -113391868 - AluSx SINE Alu -18 294 19 314 162 38 0 chr10 32197420 32197451 -113391837 + (TA)n Simple_repeat Simple_repeat 81 109 0 293 116 0 0 chr10 32197459 32197509 -113391779 + MLT2C1 LTR ERVL 350 390 -7 858 229 102 32 chr10 32197514 32197697 -113391591 + L1MC4a LINE L1 6411 6580 -1341 2298 103 0 0 chr10 32197697 32197998 -113391290 + AluSg SINE Alu 1 301 -9 858 229 102 32 chr10 32197998 32198212 -113391076 + L1MC4a LINE L1 6580 6928 -993 297 0 0 0 chr10 32198212 32198245 -113391043 + (GA)n Simple_repeat Simple_repeat 1 33 0 907 294 36 29 chr10 32198245 32198656 -113390632 + L1MC4 LINE L1 7082 7495 -547 495 288 115 56 chr10 32198640 32198951 -113390337 + L1MC4 LINE L1 7311 7602 -440 * 2183 128 0 3 chr10 32198951 32199256 -113390032 - AluSx SINE Alu -8 304 1 495 288 115 56 chr10 32199256 32199434 -113389854 + L1MC4 LINE L1 7602 7935 -107 330 98 0 0 chr10 32199454 32199505 -113389783 + (GA)n Simple_repeat Simple_repeat 1 51 0 243 209 173 36 chr10 32199528 32199638 -113389650 + L1MC4 LINE L1 7918 8042 0 826 120 0 0 chr10 32201066 32201191 -113388097 - AluSc SINE Alu -6 303 179 293 299 58 29 chr10 32201666 32201840 -113387448 - MIR SINE MIR -37 225 47 1559 169 47 30 chr10 32201844 32201954 -113387334 + AluJo SINE Alu 1 108 -204 234 0 0 0 chr10 32201954 32201980 -113387308 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 1559 169 47 30 chr10 32201980 32202170 -113387118 + AluJo SINE Alu 108 306 -6 2024 93 82 0 chr10 32202185 32202464 -113386824 + AluSp SINE Alu 5 306 -7 336 290 57 91 chr10 32203175 32203345 -113385943 + L2 LINE L2 2817 2991 -281 2438 119 50 45 chr10 32203345 32203396 -113385892 + MSTB LTR MaLR 5 54 -372 2418 100 0 3 chr10 32203396 32203707 -113385581 + AluSx SINE Alu 1 310 -2 2438 119 50 45 chr10 32203707 32204075 -113385213 + MSTB LTR MaLR 54 426 0 336 290 57 91 chr10 32204075 32204376 -113384912 + L2 LINE L2 2991 3272 0 2058 102 7 4 chr10 32204482 32204756 -113384532 + AluSq SINE Alu 29 303 -10 26 0 0 0 chr10 32205472 32205498 -113383790 + AT_rich Low_complexity Low_complexity 1 26 0 2156 115 0 3 chr10 32205498 32205785 -113383503 - AluSx SINE Alu -26 286 1 1747 171 4 11 chr10 32206046 32206360 -113382928 + AluJo SINE Alu 5 316 0 2344 103 3 0 chr10 32206463 32206765 -113382523 + AluSx SINE Alu 1 303 -9 365 175 165 10 chr10 32207575 32207672 -113381616 + MLT1L LTR MaLR 491 602 -13 1863 135 17 7 chr10 32207871 32208159 -113381129 - AluJo SINE Alu -16 296 6 442 246 116 113 chr10 32209857 32210118 -113379170 - MLT1J1 LTR MaLR 0 446 182 2351 99 0 0 chr10 32210118 32210421 -113378867 - AluSc SINE Alu -6 303 1 442 246 116 113 chr10 32210421 32210521 -113378767 - MLT1J1 LTR MaLR -264 182 84 2808 173 27 60 chr10 32210521 32211153 -113378135 + LTR36 LTR ERV1 1 611 0 2055 116 0 4 chr10 32211678 32211955 -113377333 - AluSx SINE Alu -36 276 1 1044 172 23 0 chr10 32212175 32212349 -113376939 + MSTB LTR MaLR 2 179 -247 671 169 25 0 chr10 32212338 32212456 -113376832 + MSTB LTR MaLR 312 432 0 * 1929 268 117 50 chr10 32213049 32213761 -113375527 + L1MEd LINE L1 157 820 -5490 1256 210 15 96 chr10 32213761 32213990 -113375298 + AluJo SINE Alu 1 196 -116 1821 159 0 46 chr10 32213990 32214317 -113374971 + AluJb SINE Alu 1 312 0 1256 210 15 96 chr10 32214317 32214421 -113374867 + AluJo SINE Alu 196 307 -5 1929 268 117 50 chr10 32214421 32214554 -113374734 + L1MEd LINE L1 820 943 -5367 1135 177 39 9 chr10 32214554 32214786 -113374502 + L1MB5 LINE L1 5928 6166 -8 1929 268 117 50 chr10 32214786 32215210 -113374078 + L1MEd LINE L1 943 1570 -4740 2360 106 3 0 chr10 32215210 32215511 -113373777 + AluSx SINE Alu 1 302 -10 2187 110 3 7 chr10 32215878 32216179 -113373109 + AluSx SINE Alu 10 309 -3 21 36 0 0 chr10 32216463 32216491 -113372797 + AT_rich Low_complexity Low_complexity 1 28 0 406 253 180 16 chr10 32216690 32216884 -113372404 + L1ME4a LINE L1 5547 5772 -349 473 228 39 8 chr10 32216931 32217058 -113372230 - MIR SINE MIR -10 252 122 210 319 9 71 chr10 32217104 32217217 -113372071 - MIR SINE MIR -128 134 29 231 227 176 25 chr10 32217406 32217525 -113371763 + L1ME4a LINE L1 5984 6120 -1 1252 157 32 101 chr10 32217620 32217806 -113371482 + L1MA9 LINE L1 5998 6152 -160 1954 162 0 0 chr10 32217806 32218109 -113371179 + AluJb SINE Alu 2 304 -8 1252 157 32 101 chr10 32218109 32218260 -113371028 + L1MA9 LINE L1 6152 6312 0 21 26 0 26 chr10 32218260 32218272 -113371016 + AT_rich Low_complexity Low_complexity 1 12 -26 1867 145 3 26 chr10 32218272 32218583 -113370705 - AluJb SINE Alu -8 304 1 21 26 0 26 chr10 32218583 32218609 -113370679 + AT_rich Low_complexity Low_complexity 12 38 0 221 250 0 18 chr10 32218917 32218973 -113370315 - L2 LINE L2 -1 3271 3217 692 127 71 16 chr10 32219721 32219847 -113369441 + FLAM_C SINE Alu 1 133 0 904 211 6 6 chr10 32219989 32220164 -113369124 - AluSg/x SINE Alu -17 295 121 835 128 0 48 chr10 32220169 32220178 -113369110 + (GAAA)n Simple_repeat Simple_repeat 2 10 -170 2251 139 0 0 chr10 32220178 32220488 -113368800 + AluSx SINE Alu 1 310 -2 835 128 0 48 chr10 32220488 32220666 -113368622 + (GAAA)n Simple_repeat Simple_repeat 10 180 0 227 270 48 0 chr10 32221490 32221553 -113367735 + MIR3 SINE MIR 122 187 -21 403 235 61 0 chr10 32221650 32221748 -113367540 + MIR SINE MIR 38 141 -67 2263 102 3 0 chr10 32221761 32222056 -113367232 + AluSx SINE Alu 1 296 -16 281 169 0 70 chr10 32222086 32222157 -113367131 + FLAM SINE Alu 68 133 0 595 269 75 11 chr10 32222173 32222455 -113366833 + L1MC4a LINE L1 4360 4659 -1487 1327 148 51 5 chr10 32222470 32222686 -113366602 + AluSg/x SINE Alu 84 309 -3 257 298 26 0 chr10 32222874 32222988 -113366300 + L1P LINE L1 4885 5001 -1145 1856 140 32 4 chr10 32223001 32223280 -113366008 - AluSx SINE Alu -25 287 1 38 22 0 0 chr10 32223402 32223447 -113365841 + AT_rich Low_complexity Low_complexity 1 45 0 926 242 108 71 chr10 32223517 32223754 -113365534 + L1MC4a LINE L1 5254 5481 -2327 2017 130 6 32 chr10 32223754 32224070 -113365218 + AluSx SINE Alu 1 308 -4 926 242 108 71 chr10 32224070 32224435 -113364853 + L1MC4a LINE L1 5481 5878 -1930 1038 153 0 19 chr10 32224652 32224841 -113364447 + AluSg/x SINE Alu 128 313 0 1582 164 20 27 chr10 32225168 32225461 -113363827 + AluJb SINE Alu 1 291 -21 518 236 154 50 chr10 32225819 32225941 -113363347 + MER5C DNA MER1_type 39 147 -177 2137 112 0 7 chr10 32225941 32226249 -113363039 - AluSx SINE Alu 0 306 1 518 236 154 50 chr10 32226249 32226384 -113362904 + MER5C DNA MER1_type 147 324 0 1421 135 42 75 chr10 32226431 32226645 -113362643 + MER33 DNA MER1_type 1 202 -2383 832 161 0 7 chr10 32226645 32226794 -113362494 + L1MB3 LINE L1 6033 6180 -3 1421 135 42 75 chr10 32226794 32226912 -113362376 + MER33 DNA MER1_type 202 322 -2 230 81 27 0 chr10 32227100 32227137 -113362151 + (TG)n Simple_repeat Simple_repeat 1 38 0 2011 142 137 11 chr10 32227435 32227815 -113361473 + MSTA LTR MaLR 1 428 0 669 128 10 0 chr10 32228037 32228139 -113361149 + AluJb SINE Alu 5 107 -205 201 74 0 0 chr10 32228139 32228166 -113361122 + (GA)n Simple_repeat Simple_repeat 2 28 0 249 62 0 0 chr10 32228170 32228202 -113361086 + (GGGAA)n Simple_repeat Simple_repeat 3 34 0 528 124 35 18 chr10 32228202 32228315 -113360973 + GA-rich Low_complexity Low_complexity 3 117 0 215 267 126 44 chr10 32228329 32228464 -113360824 - L2 LINE L2 -191 3081 2936 291 209 45 27 chr10 32228477 32228587 -113360701 + L1MEd LINE L1 14 125 -5994 2003 129 17 0 chr10 32228722 32229009 -113360279 - AluSx SINE Alu -13 299 8 1340 225 40 67 chr10 32229009 32229413 -113359875 + MLT2C2 LTR ERVL 3 394 -70 411 21 0 0 chr10 32229413 32229461 -113359827 + (CA)n Simple_repeat Simple_repeat 2 49 0 1340 225 40 67 chr10 32229461 32229531 -113359757 + MLT2C2 LTR ERVL 394 464 0 311 290 97 0 chr10 32229699 32229792 -113359496 + L1MEd LINE L1 433 534 -5585 24 32 0 0 chr10 32229805 32229836 -113359452 + AT_rich Low_complexity Low_complexity 1 31 0 1346 243 34 42 chr10 32229841 32229976 -113359312 - L1ME1 LINE L1 -19 6942 6807 1838 176 7 10 chr10 32229976 32230278 -113359010 - AluJb SINE Alu -11 301 1 1346 243 34 42 chr10 32230278 32230590 -113358698 - L1ME1 LINE L1 -154 6807 6499 5440 219 100 36 chr10 32230591 32232355 -113356933 - L1ME1 LINE L1 -894 6047 4171 467 160 14 1 chr10 32232382 32232464 -113356824 + MLT1A1 LTR MaLR 241 463 -42 2292 124 0 0 chr10 32232495 32232801 -113356487 - AluSx SINE Alu -6 306 1 269 228 79 10 chr10 32232802 32232903 -113356385 - L1ME1 LINE L1 -2845 4096 3989 1882 241 94 29 chr10 32232938 32233453 -113355835 - L1ME1 LINE L1 -4821 2120 1640 2058 147 3 0 chr10 32233453 32233759 -113355529 - AluSx SINE Alu -5 307 1 1882 241 94 29 chr10 32233759 32234186 -113355102 - L1ME1 LINE L1 -5301 1640 1242 2074 138 3 0 chr10 32234186 32234477 -113354811 + AluSx SINE Alu 1 292 -20 1882 241 94 29 chr10 32234477 32234739 -113354549 - L1ME1 LINE L1 -5699 1242 844 427 252 93 81 chr10 32234945 32235191 -113354097 - L1ME1 LINE L1 -5900 523 275 1518 211 0 16 chr10 32235191 32235499 -113353789 - AluJo SINE Alu -9 303 1 456 99 0 0 chr10 32235509 32235580 -113353708 + (TA)n Simple_repeat Simple_repeat 2 72 0 294 94 0 57 chr10 32235585 32235638 -113353650 - FLAM SINE Alu -1 132 83 317 309 34 28 chr10 32235699 32235877 -113353411 - L1ME1 LINE L1 -6221 202 24 * 810 209 34 28 chr10 32235865 32236042 -113353246 - L1ME LINE L1 -522 5642 5465 * 4285 198 46 53 chr10 32236039 32238321 -113350967 - L1MB4 LINE L1 -192 5988 3730 384 272 45 24 chr10 32238426 32238627 -113350661 + L1MEd LINE L1 1074 1311 -4862 2255 119 3 0 chr10 32238645 32238948 -113350340 + AluSx SINE Alu 1 304 -8 226 327 53 20 chr10 32239098 32239248 -113350040 + L1MEd LINE L1 1470 1624 -4686 459 0 0 0 chr10 32239254 32239305 -113349983 + (TA)n Simple_repeat Simple_repeat 2 52 0 412 73 0 0 chr10 32239305 32239360 -113349928 - Alu SINE Alu -9 303 249 1893 164 22 16 chr10 32239475 32239841 -113349447 + L1 LINE L1 3958 4325 -1821 2237 81 7 17 chr10 32239845 32240180 -113349108 - AluSx SINE Alu 0 312 1 2318 94 16 0 chr10 32240285 32240592 -113348696 - AluSx SINE Alu 0 312 1 229 135 0 0 chr10 32240664 32240701 -113348587 + L1P LINE L1 5214 5250 -896 2087 127 0 0 chr10 32241324 32241607 -113347681 - AluSx SINE Alu -29 283 1 4316 103 111 107 chr10 32241837 32243229 -113346059 + pTR5 LTR ERV1 79 2438 0 1291 174 97 17 chr10 32243565 32243853 -113345435 - AluJo SINE Alu -1 311 1 2068 110 11 0 chr10 32244007 32244310 -113344978 - AluSq SINE Alu 0 306 1 1566 196 0 18 chr10 32245191 32245471 -113343817 - AluJo SINE Alu -17 295 21 1769 133 36 33 chr10 32245479 32245781 -113343507 - AluJb SINE Alu -9 303 1 5726 201 53 78 chr10 32245783 32246287 -113343001 - L1MC3 LINE L1 -216 7569 7054 288 0 0 0 chr10 32246287 32246319 -113342969 + (TTTA)n Simple_repeat Simple_repeat 2 33 0 2161 108 0 0 chr10 32246324 32246601 -113342687 - AluSg SINE Alu -33 277 1 5726 201 53 78 chr10 32246601 32247170 -113342118 - L1MC3 LINE L1 -735 7050 6469 803 182 0 15 chr10 32247170 32247302 -113341986 - FLAM_C SINE Alu -3 130 1 5726 201 53 78 chr10 32247302 32247491 -113341797 - L1MC3 LINE L1 -1316 6469 6277 2350 61 41 3 chr10 32247491 32247784 -113341504 + AluY SINE Alu 1 304 -7 5726 201 53 78 chr10 32247784 32248124 -113341164 - L1MC3 LINE L1 -1508 6277 5998 28 61 0 0 chr10 32248225 32248274 -113341014 + AT_rich Low_complexity Low_complexity 1 49 0 249 196 0 0 chr10 32248916 32248967 -113340321 + (CA)n Simple_repeat Simple_repeat 1 51 0 2462 80 3 3 chr10 32248988 32249300 -113339988 + AluSx SINE Alu 1 312 0 304 326 23 8 chr10 32249446 32249578 -113339710 + GA-rich Low_complexity Low_complexity 4 137 0 244 121 0 0 chr10 32249664 32249697 -113339591 - tRNA-Gly-GGC tRNA tRNA -41 33 1 2199 102 3 10 chr10 32249798 32250092 -113339196 + AluSq SINE Alu 5 296 -17 958 186 150 5 chr10 32250267 32250487 -113338801 + ORSL DNA AcHobo 24 275 0 23 0 0 0 chr10 32250689 32250712 -113338576 + AT_rich Low_complexity Low_complexity 1 23 0 840 153 0 0 chr10 32250712 32250830 -113338458 - FLAM_C SINE Alu -25 118 1 624 263 109 53 chr10 32251438 32251758 -113337530 + L2 LINE L2 2936 3273 -40 186 71 0 0 chr10 32251767 32251795 -113337493 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 268 239 73 55 chr10 32251869 32251978 -113337310 - MIR3 SINE MIR -8 200 90 357 339 26 2 chr10 32252292 32252489 -113336799 - MIR SINE MIR -13 249 8 378 74 0 0 chr10 32252677 32252731 -113336557 + (TG)n Simple_repeat Simple_repeat 2 55 0 1355 179 93 83 chr10 32252755 32252796 -113336492 - L1MC5 LINE L1 -48 7913 7874 1589 176 4 11 chr10 32252796 32253099 -113336189 + AluJb SINE Alu 7 307 0 1355 179 93 83 chr10 32253099 32253552 -113335736 - L1MC5 LINE L1 -87 7874 7413 282 224 0 0 chr10 32253550 32253608 -113335680 - L1MC5 LINE L1 -1884 5924 5867 * 1824 116 14 94 chr10 32253693 32253955 -113335333 - L1MA4 LINE L1 -3 6297 6070 1491 195 17 28 chr10 32253955 32254242 -113335046 - AluJo SINE Alu -15 297 14 1824 116 14 94 chr10 32254242 32254342 -113334946 - L1MA4 LINE L1 -230 6070 5964 655 254 90 92 chr10 32254403 32254739 -113334549 - L1MC5 LINE L1 -2058 5750 5414 896 130 0 8 chr10 32254739 32254862 -113334426 - FLAM_C SINE Alu -11 122 1 655 254 90 92 chr10 32254862 32254981 -113334307 - L1MC5 LINE L1 -2394 5414 5296 2196 105 0 30 chr10 32255139 32255443 -113333845 + AluSx SINE Alu 1 295 -17 347 342 80 13 chr10 32255538 32255763 -113333525 - MLT1I LTR MaLR -7 402 163 290 256 28 3 chr10 32255760 32255860 -113333428 - MLT1I LTR MaLR -270 139 38 * 198 0 0 0 chr10 32257152 32257174 -113332114 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 1010 173 128 53 chr10 32257179 32257483 -113331805 - MER51A LTR ERV1 -82 552 3 189 0 0 0 chr10 32257875 32257896 -113331392 + (T)n Simple_repeat Simple_repeat 1 21 0 189 0 0 0 chr10 32258189 32258210 -113331078 + (TA)n Simple_repeat Simple_repeat 2 22 0 2039 117 7 3 chr10 32258210 32258500 -113330788 - AluSx SINE Alu -21 291 1 2001 127 30 3 chr10 32258517 32258817 -113330471 - AluSx SINE Alu -4 308 1 180 0 0 0 chr10 32259238 32259258 -113330030 + (T)n Simple_repeat Simple_repeat 1 20 0 551 147 9 18 chr10 32259560 32259669 -113329619 + L1MA7 LINE L1 4660 4767 -1379 714 130 32 8 chr10 32259676 32259799 -113329489 + L1MA7 LINE L1 5814 5939 -352 392 283 75 0 chr10 32259854 32259960 -113329328 + L1ME LINE L1 5597 5710 -411 28 86 0 0 chr10 32260049 32260119 -113329169 + AT_rich Low_complexity Low_complexity 1 70 0 266 143 63 16 chr10 32260134 32260260 -113329028 + (TA)n Simple_repeat Simple_repeat 1 132 0 274 212 47 0 chr10 32260283 32260368 -113328920 + (TA)n Simple_repeat Simple_repeat 2 90 0 597 218 45 6 chr10 32260368 32260524 -113328764 - FAM SINE Alu -23 162 1 284 299 0 0 chr10 32260911 32261018 -113328270 + C-rich Low_complexity Low_complexity 4 110 0 1650 165 0 0 chr10 32261039 32261299 -113327989 - AluSx SINE Alu -52 260 1 484 289 142 25 chr10 32261381 32261620 -113327668 + L1ME LINE L1 5469 5735 -427 1811 183 87 9 chr10 32261679 32262106 -113327182 - L1 LINE L1 -1329 4817 4358 342 67 0 0 chr10 32262207 32262252 -113327036 + (TA)n Simple_repeat Simple_repeat 1 45 0 2212 129 0 0 chr10 32262255 32262557 -113326731 - AluSx SINE Alu -9 303 2 835 278 113 61 chr10 32262852 32263378 -113325910 + L1MEc LINE L1 2144 2641 -3574 1963 147 0 0 chr10 32263378 32263703 -113325585 + AluSx SINE Alu 1 325 0 835 278 113 61 chr10 32263703 32264513 -113324775 + L1MEc LINE L1 2641 3505 -2710 714 190 9 0 chr10 32264513 32264629 -113324659 + FLAM_C SINE Alu 1 117 -26 297 0 0 0 chr10 32264633 32264666 -113324622 + (CAAA)n Simple_repeat Simple_repeat 2 34 0 317 268 118 8 chr10 32264668 32264795 -113324493 + L1MEc LINE L1 3495 3635 -2580 892 144 31 19 chr10 32264964 32265124 -113324164 - MSTD LTR MaLR -234 162 1 351 0 0 0 chr10 32265167 32265195 -113324093 + (TG)n Simple_repeat Simple_repeat 1 67 0 351 0 0 0 chr10 32265195 32265234 -113324054 + (TG)n Simple_repeat Simple_repeat 2 40 0 712 183 7 28 chr10 32265259 32265401 -113323887 + MLT1B LTR MaLR 192 330 -60 2106 85 11 0 chr10 32265402 32265684 -113323604 + THE1B-int LTR MaLR 1296 1580 0 1991 142 49 26 chr10 32265684 32266028 -113323260 + THE1B LTR MaLR 1 352 -12 12370 148 24 13 chr10 32266033 32269280 -113320008 + L1MA3 LINE L1 3020 6305 0 8657 180 25 21 chr10 32269268 32269292 -113319996 + L1 LINE L1 2901 2923 -3223 * 2130 79 28 3 chr10 32269292 32269582 -113319706 + AluY SINE Alu 1 297 -14 8657 180 25 21 chr10 32269582 32271417 -113317871 + L1 LINE L1 2923 4767 -1379 714 130 32 8 chr10 32271424 32271547 -113317741 + L1MA7 LINE L1 5814 5939 -352 407 274 75 0 chr10 32271602 32271708 -113317580 + L1ME LINE L1 5597 5710 -411 28 86 0 0 chr10 32271797 32271867 -113317421 + AT_rich Low_complexity Low_complexity 1 70 0 266 143 63 16 chr10 32271882 32272008 -113317280 + (TA)n Simple_repeat Simple_repeat 1 132 0 274 212 47 0 chr10 32272031 32272116 -113317172 + (TA)n Simple_repeat Simple_repeat 2 90 0 822 199 12 6 chr10 32272116 32272277 -113317011 - FAM SINE Alu -23 162 1 366 268 10 0 chr10 32272286 32272383 -113316905 - MIR SINE MIR -11 251 154 307 225 40 92 chr10 32272383 32272556 -113316732 - MER104 DNA Tc2 -13 167 4 312 229 60 24 chr10 32272558 32272641 -113316647 - MIR SINE MIR -107 155 70 1847 132 0 129 chr10 32272688 32273028 -113316260 + AluJo SINE Alu 1 296 -6 1661 132 44 0 chr10 32273710 32273961 -113315327 + AluSg SINE Alu 39 300 -10 251 132 38 38 chr10 32274304 32274357 -113314931 + MADE1 DNA Mariner 1 53 -27 22 0 0 0 chr10 32274443 32274465 -113314823 + AT_rich Low_complexity Low_complexity 1 22 0 30815 117 14 62 chr10 32274497 32280908 -113308380 + L1PA8 LINE L1 12 6105 -67 311 147 44 0 chr10 32280909 32280977 -113308311 + L1P LINE L1 4641 4711 -1435 * 407 94 0 0 chr10 32280962 32281026 -113308262 + L1PA8 LINE L1 6107 6170 -2 3192 135 0 17 chr10 32281040 32281522 -113307766 + LTR8 LTR ERV1 154 627 -64 2086 129 34 74 chr10 32281524 32281707 -113307581 + THE1B LTR MaLR 1 164 -200 2302 50 14 0 chr10 32281707 32282041 -113307247 + AluY SINE Alu 1 338 0 2086 129 34 74 chr10 32282041 32282235 -113307053 + THE1B LTR MaLR 164 364 0 3317 91 0 0 chr10 32282235 32282663 -113306625 + THE1B-int LTR MaLR 1 428 -1152 199 279 73 15 chr10 32282713 32282781 -113306507 - MIR3 SINE MIR -18 190 119 5212 146 13 68 chr10 32283012 32283159 -113306129 - MER4D LTR ERV1 0 903 749 2139 124 20 0 chr10 32283159 32283458 -113305830 - AluSx SINE Alu -7 305 1 5212 146 13 68 chr10 32283458 32284266 -113305022 - MER4D LTR ERV1 -154 749 1 22 0 0 0 chr10 32284393 32284415 -113304873 + AT_rich Low_complexity Low_complexity 1 22 0 2302 95 0 3 chr10 32284437 32284733 -113304555 + AluSc SINE Alu 1 295 -14 419 206 31 49 chr10 32285134 32285272 -113304016 + MIR SINE MIR 63 200 -62 245 154 0 0 chr10 32285325 32285364 -113303924 - MSTA LTR MaLR 0 426 388 1553 132 0 4 chr10 32285364 32285591 -113303697 + AluSg/x SINE Alu 87 312 0 189 107 0 0 chr10 32285596 32285624 -113303664 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 2475 138 17 27 chr10 32285624 32286029 -113303259 - MSTA LTR MaLR -27 401 1 1436 191 83 13 chr10 32286392 32286464 -113302824 + MER58B DNA MER1_type 6 72 -2348 219 36 0 0 chr10 32286464 32286492 -113302796 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1436 191 83 13 chr10 32286492 32286733 -113302555 + MER58B DNA MER1_type 72 341 0 753 299 52 0 chr10 32286778 32286989 -113302299 - MIR SINE MIR -10 252 31 414 0 0 0 chr10 32287241 32287287 -113302001 + (TG)n Simple_repeat Simple_repeat 1 46 0 1060 266 80 71 chr10 32288289 32288841 -113300447 + LTR1B LTR ERV1 33 589 -237 269 349 0 0 chr10 32289090 32289176 -113300112 - L2 LINE L2 -26 3287 3202 2528 208 183 82 chr10 32289258 32290184 -113299104 - LTR28 LTR ERV1 0 1020 2 549 288 36 4 chr10 32290649 32290818 -113298470 - MER5B DNA MER1_type 0 178 17 302 214 71 51 chr10 32290844 32290942 -113298346 - MLT1I LTR MaLR -270 139 40 2663 203 114 40 chr10 32291799 32291986 -113297302 + HAL1 LINE L1 959 1131 -1376 2089 120 17 3 chr10 32291986 32292287 -113297001 + AluSq SINE Alu 1 305 -8 2663 203 114 40 chr10 32292287 32292955 -113296333 + HAL1 LINE L1 1131 1878 -629 1862 133 29 16 chr10 32293750 32294058 -113295230 + AluSq SINE Alu 1 312 -1 307 189 54 14 chr10 32294087 32294161 -113295127 + L1MC4a LINE L1 5812 5888 -1920 2324 114 0 0 chr10 32294354 32294661 -113294627 - AluSx SINE Alu -5 307 1 546 276 142 25 chr10 32294743 32294982 -113294306 + L1ME LINE L1 5469 5735 -427 7536 164 36 29 chr10 32295041 32295504 -113293784 - L1 LINE L1 -1329 4817 4359 2177 86 7 17 chr10 32295504 32295835 -113293453 + AluSx SINE Alu 5 312 0 7536 164 36 29 chr10 32295835 32296211 -113293077 - L1 LINE L1 -1787 4359 3987 2056 118 3 3 chr10 32296211 32296524 -113292764 - AluSx SINE Alu 0 313 1 7536 164 36 29 chr10 32296524 32296591 -113292697 - L1 LINE L1 -2159 3987 3922 3044 110 36 0 chr10 32296591 32297010 -113292278 + MER57B LTR ERV1 1 434 0 7536 164 36 29 chr10 32297010 32297638 -113291650 - L1 LINE L1 -2224 3922 3269 1650 171 25 165 chr10 32297642 32298158 -113291130 - MER70B LTR ERVL -134 444 1 957 208 60 18 chr10 32298161 32298374 -113290914 - L1 LINE L1 -2882 3264 3035 1826 100 112 4 chr10 32298374 32298643 -113290645 - AluSg SINE Alu -12 298 1 957 208 60 18 chr10 32298643 32298713 -113290575 - L1 LINE L1 -3111 3035 2969 1316 229 48 0 chr10 32298714 32299046 -113290242 + L1ME1 LINE L1 4950 5297 -849 6311 146 38 12 chr10 32299050 32300760 -113288528 - L1PB2 LINE L1 0 6151 4372 258 56 0 0 chr10 32300760 32300796 -113288492 + (TTTTA)n Simple_repeat Simple_repeat 2 37 0 6311 146 38 12 chr10 32300796 32301191 -113288097 - L1PB2 LINE L1 -1779 4372 3988 617 230 0 0 chr10 32301206 32301341 -113287947 + L1ME1 LINE L1 5326 5460 -704 961 215 45 21 chr10 32301341 32301583 -113287705 + LTR52 LTR ERVL 1 248 -173 1199 144 0 26 chr10 32301583 32301778 -113287510 - AluJb SINE Alu -7 305 116 582 135 58 0 chr10 32301778 32301882 -113287406 + FLAM_C SINE Alu 2 111 -32 582 171 40 194 chr10 32302048 32302088 -113287200 + LTR52 LTR ERVL 209 254 -167 1841 146 0 56 chr10 32302088 32302282 -113287006 - AluJb SINE Alu -7 305 135 1853 151 0 35 chr10 32302282 32302594 -113286694 + AluJo SINE Alu 1 301 -11 1841 146 0 56 chr10 32302594 32302722 -113286566 - AluJb SINE Alu -177 135 1 582 171 40 194 chr10 32302722 32302749 -113286539 + LTR52 LTR ERVL 254 284 -137 752 106 19 0 chr10 32302749 32302853 -113286435 - U6 snRNA snRNA -1 106 1 582 171 40 194 chr10 32302853 32303036 -113286252 + LTR52 LTR ERVL 284 421 0 1312 213 96 147 chr10 32303039 32303360 -113285928 + L1ME1 LINE L1 5460 5796 -370 511 91 0 65 chr10 32303360 32303437 -113285851 + AluJ/FRAM SINE Alu 226 297 -15 1312 213 96 147 chr10 32303437 32303782 -113285506 + L1ME1 LINE L1 5796 6164 -2 199 238 24 0 chr10 32303871 32303913 -113285375 - L2 LINE L2 -1152 2162 2120 1417 226 163 88 chr10 32303933 32304816 -113284472 - HAL1 LINE L1 -709 1798 850 694 149 203 0 chr10 32304818 32304966 -113284322 - MLT1E LTR MaLR -5 500 323 818 128 45 0 chr10 32305263 32305396 -113283892 + MER85 DNA T2_type 1 139 0 817 269 51 62 chr10 32305464 32305820 -113283468 - MLT1E LTR MaLR -237 356 6 220 310 81 21 chr10 32305966 32306134 -113283154 - L2 LINE L2 -16 3256 3113 22 0 0 0 chr10 32306644 32306666 -113282622 + AT_rich Low_complexity Low_complexity 1 22 0 1137 133 0 6 chr10 32307547 32307705 -113281583 + AluSx SINE Alu 1 157 -155 204 182 0 0 chr10 32307756 32307800 -113281488 + GA-rich Low_complexity Low_complexity 1 44 0 233 146 21 0 chr10 32307859 32307907 -113281381 + GA-rich Low_complexity Low_complexity 3 51 0 308 254 109 55 chr10 32308517 32308615 -113280673 + L1MEd LINE L1 922 1013 -5106 2349 107 0 0 chr10 32308615 32308924 -113280364 + AluSx SINE Alu 1 309 -3 308 254 109 55 chr10 32308924 32309100 -113280188 + L1MEd LINE L1 1013 1211 -4908 1179 227 65 57 chr10 32309172 32309678 -113279610 + L1MC5 LINE L1 7404 7913 -48 2134 126 7 0 chr10 32310046 32310339 -113278949 - AluSx SINE Alu -17 295 1 2318 94 16 0 chr10 32310444 32310751 -113278537 - AluSx SINE Alu 0 312 1 229 135 0 0 chr10 32310823 32310860 -113278428 + L1P LINE L1 5214 5250 -896 2257 96 0 0 chr10 32311483 32311764 -113277524 - AluSg SINE Alu -29 281 1 1096 108 38 181 chr10 32311888 32312231 -113277057 - L1PBa LINE L1 -4763 2100 1807 1042 158 5 35 chr10 32312238 32312440 -113276848 + AluJb SINE Alu 108 303 -9 2170 127 0 0 chr10 32312526 32312826 -113276462 + AluSx SINE Alu 1 300 -12 21 0 0 0 chr10 32313694 32313715 -113275573 + AT_rich Low_complexity Low_complexity 1 21 0 2131 102 20 7 chr10 32313812 32314107 -113275181 + AluSx SINE Alu 1 299 -13 2168 111 3 23 chr10 32314118 32314424 -113274864 + AluSx SINE Alu 1 300 -12 286 254 149 45 chr10 32315000 32315134 -113274154 - MIR SINE MIR -21 241 94 827 189 26 0 chr10 32315182 32315335 -113273953 - AluSg/x SINE Alu -18 294 138 2174 101 44 0 chr10 32315373 32315670 -113273618 + AluSq SINE Alu 1 310 -3 1095 219 20 65 chr10 32315712 32315806 -113273482 - MER8 DNA MER2_type 0 239 142 2274 77 40 7 chr10 32315806 32316104 -113273184 + AluY SINE Alu 1 308 -3 1095 219 20 65 chr10 32316104 32316256 -113273032 - MER8 DNA MER2_type -97 142 4 822 189 0 0 chr10 32316763 32316890 -113272398 - FLAM_A SINE Alu -3 130 4 23 0 0 0 chr10 32317938 32317961 -113271327 + AT_rich Low_complexity Low_complexity 1 23 0 2160 107 3 0 chr10 32318112 32318401 -113270887 + AluSx SINE Alu 23 312 0 240 59 0 0 chr10 32319005 32319039 -113270249 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 200 286 0 36 chr10 32319292 32319348 -113269940 + MIR SINE MIR 87 140 -68 2137 136 0 0 chr10 32319740 32320042 -113269246 - AluSx SINE Alu -10 302 1 2244 106 17 0 chr10 32320107 32320408 -113268880 + AluSx SINE Alu 1 306 -6 2169 112 0 14 chr10 32321356 32321652 -113267636 - AluSx SINE Alu -20 292 1 1264 162 21 30 chr10 32323498 32323732 -113265556 + AluJb SINE Alu 27 258 -54 1703 176 20 0 chr10 32323743 32324039 -113265249 + AluJb SINE Alu 5 306 -6 182 333 117 18 chr10 32324075 32324186 -113265102 - L2 LINE L2 -556 2758 2637 217 322 223 0 chr10 32324485 32324606 -113264682 + L2 LINE L2 3123 3270 -2 291 54 0 0 chr10 32324732 32324769 -113264519 + (TTTTA)n Simple_repeat Simple_repeat 3 39 0 667 38 0 0 chr10 32324773 32324853 -113264435 - HY3 scRNA scRNA -2 99 20 249 163 0 23 chr10 32325332 32325375 -113263913 + Alu SINE Alu 171 212 -87 2125 112 30 3 chr10 32326348 32326652 -113262636 + AluSx SINE Alu 1 312 0 1549 139 19 15 chr10 32326664 32326923 -113262365 + AluSx SINE Alu 1 260 -52 2315 82 0 3 chr10 32327131 32327424 -113261864 - AluY SINE Alu -19 292 1 1544 203 0 3 chr10 32327513 32327799 -113261489 + AluJo SINE Alu 1 285 -27 1669 139 24 133 chr10 32327850 32328182 -113261106 + AluJo SINE Alu 1 296 -6 25 0 0 0 chr10 32328185 32328210 -113261078 + AT_rich Low_complexity Low_complexity 1 25 0 1814 118 61 17 chr10 32328336 32328633 -113260655 + AluSx SINE Alu 1 310 -2 2026 134 3 13 chr10 32329079 32329386 -113259902 + AluSx SINE Alu 1 304 -8 24 0 0 0 chr10 32329912 32329936 -113259352 + AT_rich Low_complexity Low_complexity 1 24 0 2078 116 0 38 chr10 32330821 32331158 -113258130 + AluSx SINE Alu 2 327 0 2248 118 0 0 chr10 32331180 32331476 -113257812 + AluSx SINE Alu 3 298 -14 270 306 129 14 chr10 32331764 32331973 -113257315 + L1ME LINE L1 5318 5550 -571 1925 102 0 16 chr10 32332598 32332853 -113256435 + AluSx SINE Alu 23 273 -39 243 289 24 0 chr10 32332956 32333039 -113256249 - L1ME LINE L1 -506 5615 5531 29 0 0 0 chr10 32334057 32334086 -113255202 + AT_rich Low_complexity Low_complexity 1 29 0 1684 171 63 0 chr10 32334891 32335178 -113254110 + AluJo SINE Alu 1 305 -7 5836 82 152 8 chr10 32335866 32336782 -113252506 - L1P LINE L1 -5098 1048 1 1927 116 20 3 chr10 32336788 32337089 -113252199 - L1PBa LINE L1 -4950 1913 1608 456 88 0 0 chr10 32337090 32337147 -113252141 - U6 snRNA snRNA -1 106 50 346 352 62 6 chr10 32337445 32337607 -113251681 + MIR3 SINE MIR 21 191 -17 1678 183 3 24 chr10 32341550 32341845 -113247443 - AluJo SINE Alu -23 289 1 268 180 82 0 chr10 32341856 32341917 -113247371 - MER94 DNA DNA -68 66 1 482 123 25 12 chr10 32344662 32344743 -113244545 + AluY SINE Alu 219 300 -11 777 91 0 68 chr10 32344861 32344993 -113244295 + AluSg/x SINE Alu 187 309 0 998 121 0 0 chr10 32345012 32345144 -113244144 + AluSg SINE Alu 2 133 -177 2207 105 20 3 chr10 32345144 32345448 -113243840 + AluSx SINE Alu 1 309 -3 628 285 58 23 chr10 32345494 32345803 -113243485 + L1ME LINE L1 47 366 -5704 574 254 105 28 chr10 32345815 32346063 -113243225 - LTR41 LTR ERVL -7 766 500 966 234 121 16 chr10 32346191 32346555 -113242733 + L1ME LINE L1 2117 2518 -3562 1426 220 118 8 chr10 32346600 32347119 -113242169 + L1ME LINE L1 2609 3184 -2896 11190 157 26 11 chr10 32347235 32350400 -113238888 + L1MA3 LINE L1 3091 6304 -1 2486 83 27 5 chr10 32350424 32350996 -113238292 - L1P3 LINE L1 -551 5603 5024 292 200 84 21 chr10 32351183 32351278 -113238010 - LTR41 LTR ERVL -672 101 1 2241 108 20 0 chr10 32351497 32351803 -113237485 - AluSx SINE Alu 0 312 1 21 0 0 0 chr10 32352000 32352021 -113237267 + AT_rich Low_complexity Low_complexity 1 21 0 2218 127 0 0 chr10 32352450 32352758 -113236530 - AluSc SINE Alu 0 309 2 5117 84 3 0 chr10 32353018 32353676 -113235612 + PABL_A LTR ERV1 1 660 0 200 328 0 0 chr10 32353728 32353786 -113235502 + MIR SINE MIR 48 105 -103 1574 175 111 143 chr10 32354244 32354974 -113234314 - LTR8A LTR ERV1 -20 707 1 8257 104 2 25 chr10 32355317 32356510 -113232778 + L1P3 LINE L1 5 1170 -5291 292 247 27 0 chr10 32357218 32357291 -113231997 - MLT1K LTR MaLR -6 582 508 414 174 7 0 chr10 32357343 32357443 -113231845 - AluJ/FLAM SINE Alu -235 67 1 420 207 0 34 chr10 32357669 32357794 -113231494 + L1MC/D LINE L1 5724 5837 -305 1072 277 37 35 chr10 32358531 32358935 -113230353 + MLT1I LTR MaLR 1 405 -4 2195 87 28 3 chr10 32359472 32359761 -113229527 - AluSx SINE Alu -16 296 1 27 29 0 0 chr10 32360034 32360068 -113229220 + AT_rich Low_complexity Low_complexity 1 34 0 2160 100 0 4 chr10 32360207 32360488 -113228800 - AluSx SINE Alu -32 280 1 736 174 23 0 chr10 32360598 32360730 -113228558 + AluJb SINE Alu 2 136 -176 2523 58 0 0 chr10 32360734 32361028 -113228260 + AluY SINE Alu 1 294 -17 30 0 0 0 chr10 32361028 32361058 -113228230 + AT_rich Low_complexity Low_complexity 1 30 0 779 272 53 24 chr10 32361152 32361398 -113227890 - MIR SINE MIR -9 253 1 1515 170 46 32 chr10 32361518 32361800 -113227488 + AluSx SINE Alu 1 286 -26 29 0 0 0 chr10 32361803 32361832 -113227456 + AT_rich Low_complexity Low_complexity 1 29 0 2154 126 0 0 chr10 32362273 32362574 -113226714 + AluSx SINE Alu 1 301 -11 1987 145 7 10 chr10 32363099 32363409 -113225879 + AluSx SINE Alu 1 309 -3 2117 112 3 3 chr10 32363633 32363929 -113225359 + AluSx SINE Alu 12 307 -5 237 262 135 64 chr10 32364050 32364612 -113224676 + L1M4 LINE L1 2223 2824 -3322 2305 89 3 0 chr10 32365037 32365328 -113223960 + AluSp SINE Alu 1 292 -21 693 175 35 0 chr10 32365351 32365465 -113223823 + FLAM_C SINE Alu 1 118 -15 35 0 0 0 chr10 32365476 32365511 -113223777 + AT_rich Low_complexity Low_complexity 1 35 0 1589 160 46 25 chr10 32365878 32366159 -113223129 + AluJo SINE Alu 1 287 -25 497 24 48 24 chr10 32366159 32366242 -113223046 + (CATAA)n Simple_repeat Simple_repeat 2 86 0 2244 107 0 3 chr10 32366286 32366594 -113222694 + AluSq SINE Alu 1 307 -6 2476 84 0 0 chr10 32366736 32367047 -113222241 + AluY SINE Alu 1 311 0 2094 122 20 0 chr10 32367099 32367394 -113221894 + AluSx SINE Alu 1 301 -11 381 214 0 11 chr10 32367947 32368036 -113221252 - L1MB3 LINE L1 -86 6097 6010 2249 115 0 0 chr10 32368531 32368826 -113220462 + AluSx SINE Alu 1 295 -17 888 178 43 0 chr10 32368966 32369129 -113220159 + FAM SINE Alu 1 170 -5 1855 145 11 64 chr10 32369685 32369851 -113219437 - MER44D DNA MER2_type -1882 609 436 2159 112 11 0 chr10 32369851 32370138 -113219150 + AluSx SINE Alu 1 290 -22 1855 145 11 64 chr10 32370138 32370329 -113218959 - MER44D DNA MER2_type -2055 436 1 1541 118 169 0 chr10 32371061 32371316 -113217972 + AluSx SINE Alu 1 298 -4 2038 135 0 13 chr10 32371459 32371763 -113217525 - AluSx SINE Alu -12 300 1 183 350 29 58 chr10 32371831 32372105 -113217183 + L2 LINE L2 2596 2861 -453 216 330 119 9 chr10 32372174 32372283 -113217005 + L2 LINE L2 2948 3068 -204 2162 117 3 0 chr10 32372600 32372898 -113216390 - AluSx SINE Alu -13 299 1 338 247 113 27 chr10 32373068 32373358 -113215930 - L1ME4a LINE L1 -202 5919 5599 181 326 109 80 chr10 32373528 32373659 -113215629 + L3 LINE CR1 683 809 -768 2052 118 30 3 chr10 32373659 32373955 -113215333 + AluSx SINE Alu 1 304 -8 181 326 109 80 chr10 32373955 32374384 -113214904 + L3 LINE CR1 809 1259 -318 354 200 14 0 chr10 32374958 32375028 -113214260 + MLT1K LTR MaLR 518 588 0 270 296 244 24 chr10 32375088 32375301 -113213987 + L3 LINE CR1 1316 1575 -2 2356 93 3 0 chr10 32375504 32375804 -113213484 + AluSx SINE Alu 1 301 -11 201 231 41 124 chr10 32375821 32375942 -113213346 + MIR SINE MIR 66 176 -86 268 228 81 15 chr10 32376252 32376383 -113212905 + MIR SINE MIR 73 212 -50 198 0 0 0 chr10 32377174 32377196 -113212092 + (A)n Simple_repeat Simple_repeat 1 22 0 2160 113 7 10 chr10 32377467 32377769 -113211519 + AluSx SINE Alu 3 303 -9 185 308 44 0 chr10 32377962 32378053 -113211235 - MIR3 SINE MIR -30 178 84 329 273 106 0 chr10 32378301 32378433 -113210855 - MIR SINE MIR -29 233 88 2241 103 3 0 chr10 32378458 32378748 -113210540 + AluSx SINE Alu 1 291 -21 2062 143 3 0 chr10 32379031 32379331 -113209957 - AluSx SINE Alu -9 303 3 2463 134 55 0 chr10 32379462 32379866 -113209422 + MSTB LTR MaLR 1 426 0 310 241 226 0 chr10 32380154 32380287 -113209001 - L1ME LINE L1 -459 5662 5500 2546 130 21 3 chr10 32380322 32380707 -113208581 + MSTA LTR MaLR 16 407 -21 342 294 12 28 chr10 32380730 32380904 -113208384 - L1ME LINE L1 -735 5427 5257 455 132 105 26 chr10 32381659 32381773 -113207515 + MER53 DNA DNA 3 125 -64 2202 113 0 3 chr10 32382280 32382572 -113206716 - AluSx SINE Alu -21 291 1 325 306 228 14 chr10 32382645 32383165 -113206123 - L2 LINE L2 -28 3285 2643 440 254 18 0 chr10 32383868 32383982 -113205306 + MER5B DNA MER1_type 2 117 -61 1671 160 3 20 chr10 32384469 32384762 -113204526 + AluJo SINE Alu 1 288 -24 246 161 89 0 chr10 32384830 32384886 -113204402 + MIR SINE MIR 85 145 -63 2332 104 3 0 chr10 32386879 32387187 -113202101 + AluSg SINE Alu 1 309 -1 360 0 0 0 chr10 32387239 32387279 -113202009 + (CA)n Simple_repeat Simple_repeat 2 41 0 22 35 0 0 chr10 32389432 32389461 -113199827 + AT_rich Low_complexity Low_complexity 1 29 0 348 302 151 44 chr10 32390502 32390727 -113198561 + L3 LINE CR1 1011 1259 -318 349 200 14 0 chr10 32391300 32391370 -113197918 + MLT1K LTR MaLR 518 588 0 314 285 248 33 chr10 32391430 32391644 -113197644 + L3 LINE CR1 1316 1575 -2 247 256 43 119 chr10 32391790 32391846 -113197442 + MIR SINE MIR 2 61 -177 2249 90 3 0 chr10 32391846 32392146 -113197142 + AluSx SINE Alu 1 301 -11 247 256 43 119 chr10 32392146 32392284 -113197004 + MIR SINE MIR 61 176 -62 310 252 99 23 chr10 32392594 32392725 -113196563 + MIR SINE MIR 72 212 -50 198 0 0 0 chr10 32393516 32393538 -113195750 + (A)n Simple_repeat Simple_repeat 1 22 0 2033 113 7 10 chr10 32393809 32394111 -113195177 + AluSx SINE Alu 3 303 -9 227 309 66 29 chr10 32394254 32394438 -113194850 - MIR3 SINE MIR -30 178 37 390 273 106 0 chr10 32394644 32394776 -113194512 - MIR SINE MIR -29 233 88 2033 121 3 0 chr10 32394801 32395099 -113194189 + AluSx SINE Alu 1 299 -13 219 340 130 0 chr10 32395425 32395525 -113193763 - L2 LINE L2 -212 3060 2948 268 350 29 58 chr10 32395594 32395868 -113193420 - L2 LINE L2 -453 2861 2596 1919 135 0 13 chr10 32395936 32396240 -113193048 + AluSx SINE Alu 1 300 -12 1579 114 169 0 chr10 32396381 32396636 -113192652 - AluSx SINE Alu -4 298 1 207 88 29 0 chr10 32400226 32400260 -113189028 + (CCCCCA)n Simple_repeat Simple_repeat 6 40 0 899 169 7 0 chr10 32401407 32401561 -113187727 - 7SLRNA srpRNA srpRNA -71 249 95 328 293 165 0 chr10 32402299 32402432 -113186856 - MIR SINE MIR -6 256 102 209 32 0 32 chr10 32402490 32402521 -113186767 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 1644 159 30 0 chr10 32402522 32402668 -113186620 - AluSx SINE Alu -32 280 121 513 0 0 0 chr10 32402668 32402725 -113186563 + (TG)n Simple_repeat Simple_repeat 1 57 0 1644 159 30 0 chr10 32402725 32402849 -113186439 - AluSx SINE Alu -191 121 2 238 342 7 0 chr10 32403623 32403775 -113185513 + CT-rich Low_complexity Low_complexity 1 153 0 225 0 0 0 chr10 32404004 32404029 -113185259 + (CAAAA)n Simple_repeat Simple_repeat 4 28 0 199 231 231 0 chr10 32404567 32404619 -113184669 - MIR SINE MIR -111 151 88 404 160 155 105 chr10 32405201 32405435 -113183853 - MIR SINE MIR -10 252 16 1618 168 27 7 chr10 32406499 32406791 -113182497 + AluSx SINE Alu 1 298 -14 1841 162 0 0 chr10 32407895 32408197 -113181091 + AluSx SINE Alu 1 302 -10 345 279 41 41 chr10 32408927 32409049 -113180239 - MIR3 SINE MIR -25 183 62 223 237 132 26 chr10 32409278 32409354 -113179934 - MIR SINE MIR -70 192 109 210 180 0 60 chr10 32410049 32410099 -113179189 + (TATATG)n Simple_repeat Simple_repeat 6 52 0 2025 133 3 0 chr10 32410413 32410721 -113178567 + AluSx SINE Alu 1 309 -3 869 192 6 13 chr10 32411046 32411202 -113178086 + MER5A DNA MER1_type 2 156 -33 2273 100 3 0 chr10 32411552 32411861 -113177427 + AluSp SINE Alu 1 310 -3 1623 167 4 4 chr10 32412263 32412538 -113176750 + AluJo SINE Alu 1 275 -37 574 262 141 22 chr10 32412646 32412990 -113176298 + L1ME LINE L1 5317 5701 -458 23 33 0 0 chr10 32413345 32413375 -113175913 + AT_rich Low_complexity Low_complexity 1 30 0 774 195 39 19 chr10 32413429 32413645 -113175643 - L1MB7 LINE L1 -221 5963 5771 1477 157 86 4 chr10 32414886 32415166 -113174122 - AluJb SINE Alu -9 303 1 820 170 25 25 chr10 32415313 32415472 -113173816 + AluJo SINE Alu 5 163 -149 876 142 0 14 chr10 32416438 32416579 -113172709 + AluJb SINE Alu 118 256 -56 2039 110 0 13 chr10 32417112 32417412 -113171876 + AluJb SINE Alu 9 304 -8 272 298 26 33 chr10 32417441 32417592 -113171696 - L1ME4a LINE L1 -201 5920 5771 206 311 14 14 chr10 32418186 32418260 -113171028 - L2 LINE L2 -3 3310 3237 1638 157 47 30 chr10 32419302 32419601 -113169687 + AluJb SINE Alu 1 304 -8 1825 149 3 20 chr10 32419725 32419913 -113169375 - AluSx SINE Alu -15 297 114 3596 119 39 47 chr10 32419913 32420532 -113168756 - LTR18B LTR ERVL 0 614 1 1825 149 3 20 chr10 32420532 32420645 -113168643 - AluSx SINE Alu -198 114 1 269 161 0 54 chr10 32420738 32420794 -113168494 - L1ME4a LINE L1 -360 5761 5709 * 284 197 43 51 chr10 32420790 32420907 -113168381 + L1ME LINE L1 5711 5826 -295 238 245 158 62 chr10 32421033 32421166 -113168122 + MIR3 SINE MIR 18 163 -45 1001 98 0 0 chr10 32421170 32421302 -113167986 + AluY SINE Alu 1 132 -179 2247 58 0 27 chr10 32421306 32421601 -113167687 + AluY SINE Alu 1 287 -24 484 313 33 62 chr10 32422688 32423056 -113166232 - MLT1K LTR MaLR -6 582 226 1564 189 38 58 chr10 32423126 32423522 -113165766 - MLT1B LTR MaLR 0 390 3 480 18 0 0 chr10 32423617 32423674 -113165614 + (CA)n Simple_repeat Simple_repeat 2 58 0 3015 251 76 38 chr10 32424083 32425208 -113164080 + HAL1 LINE L1 1304 2471 -36 1047 116 104 93 chr10 32425309 32425402 -113163886 + L1MA9 LINE L1 6051 6141 -171 1746 120 42 39 chr10 32425402 32425646 -113163642 - L1MA5 LINE L1 -2 6298 6051 1705 185 0 3 chr10 32425646 32425944 -113163344 - AluJb SINE Alu -15 297 1 1746 120 42 39 chr10 32425944 32426032 -113163256 - L1MA5 LINE L1 -249 6051 5965 1047 116 104 93 chr10 32426032 32426061 -113163227 + L1MA9 LINE L1 6141 6168 -144 180 0 0 0 chr10 32426061 32426081 -113163207 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1047 116 104 93 chr10 32426081 32426216 -113163072 + L1MA9 LINE L1 6168 6312 0 1781 97 93 0 chr10 32426252 32426509 -113162779 + AluSx SINE Alu 1 281 -31 351 0 0 0 chr10 32426511 32426550 -113162738 + (CA)n Simple_repeat Simple_repeat 2 40 0 462 278 15 44 chr10 32426569 32426722 -113162566 - MIR3 SINE MIR -15 193 41 181 250 21 42 chr10 32427437 32427485 -113161803 + MIR SINE MIR 20 66 -196 192 133 33 0 chr10 32427737 32427767 -113161521 + MIR SINE MIR 115 145 -63 570 202 39 8 chr10 32428191 32428320 -113160968 + MER94 DNA DNA 2 134 0 215 214 0 0 chr10 32428335 32428377 -113160911 + CT-rich Low_complexity Low_complexity 2 43 0 2355 69 0 3 chr10 32428433 32428736 -113160552 + AluSg1 SINE Alu 1 302 -7 1435 208 68 17 chr10 32429550 32429569 -113159719 - L1ME3 LINE L1 0 6162 6145 952 182 80 144 chr10 32429569 32429652 -113159636 + MSTD LTR MaLR 1 88 -308 1914 85 22 15 chr10 32429652 32429924 -113159364 - AluSc SINE Alu -14 295 22 952 182 80 144 chr10 32429924 32430263 -113159025 + MSTD LTR MaLR 88 396 0 1435 208 68 17 chr10 32430263 32430594 -113158694 - L1ME3 LINE L1 -17 6145 5794 2137 98 37 0 chr10 32430610 32430905 -113158383 - AluSg SINE Alu -4 306 1 688 296 116 5 chr10 32431241 32431457 -113157831 - MIR SINE MIR -21 241 2 261 133 0 0 chr10 32432133 32432178 -113157110 - AluJ/FLAM SINE Alu -218 84 40 287 259 0 7 chr10 32432227 32432362 -113156926 + (CA)n Simple_repeat Simple_repeat 2 135 0 27 0 0 0 chr10 32432571 32432598 -113156690 + AT_rich Low_complexity Low_complexity 1 27 0 1349 239 65 75 chr10 32432601 32433111 -113156177 + MER77 LTR ERV1 54 558 -47 613 208 32 8 chr10 32433894 32434019 -113155269 + MLT1A2 LTR MaLR 1 128 -246 19279 138 17 14 chr10 32434019 32436989 -113152299 + L1M1 LINE L1 27 3004 -4561 971 204 71 31 chr10 32436989 32437214 -113152074 - MER77 LTR ERV1 -196 409 176 1923 119 10 7 chr10 32437229 32437524 -113151764 + AluSx SINE Alu 1 296 -16 655 192 0 32 chr10 32437527 32437652 -113151636 - MER77 LTR ERV1 -484 121 1 372 225 25 0 chr10 32437659 32437739 -113151549 + MER5B DNA MER1_type 24 105 -73 1934 142 14 96 chr10 32437950 32438304 -113150984 - L1MB8 LINE L1 -55 6123 5808 796 146 23 0 chr10 32438304 32438434 -113150854 - FLAM_C SINE Alu 0 133 1 1934 142 14 96 chr10 32438434 32438508 -113150780 - L1MB8 LINE L1 -370 5808 5730 612 249 5 29 chr10 32439141 32439350 -113149938 - L1M4 LINE L1 -1721 4425 4222 2400 60 0 11 chr10 32439356 32439672 -113149616 + AluY SINE Alu 1 313 0 1222 137 0 11 chr10 32439672 32439854 -113149434 + AluSg/x SINE Alu 127 306 -4 2092 131 51 26 chr10 32439869 32440221 -113149067 + THE1B LTR MaLR 1 361 -3 1944 208 59 2 chr10 32440221 32440674 -113148614 - L1M4 LINE L1 -1923 4223 3742 284 327 137 0 chr10 32440674 32440827 -113148461 + L2 LINE L2 2616 2789 -525 1429 149 0 0 chr10 32440839 32441047 -113148241 - AluJo SINE Alu -18 294 87 705 313 68 26 chr10 32441059 32441428 -113147860 + L2 LINE L2 2793 3145 -168 189 0 0 0 chr10 32441428 32441449 -113147839 + (TTA)n Simple_repeat Simple_repeat 3 23 0 7651 26 0 0 chr10 32441449 32442435 -113146853 - L1PA4 LINE L1 -18 6137 5152 705 313 68 26 chr10 32442435 32442460 -113146828 + L2 LINE L2 3144 3203 -110 1569 196 0 11 chr10 32442515 32442796 -113146492 + AluJb SINE Alu 7 284 -28 459 239 13 45 chr10 32442821 32442976 -113146312 - L2 LINE L2 -45 3268 3119 904 222 56 65 chr10 32442992 32443048 -113146240 + L1MA9 LINE L1 5981 6036 -276 2115 107 16 16 chr10 32443048 32443357 -113145931 + AluSx SINE Alu 1 309 -3 904 222 56 65 chr10 32443357 32443606 -113145682 + L1MA9 LINE L1 6036 6283 -29 927 97 8 0 chr10 32443660 32443784 -113145504 - AluJb SINE Alu -186 126 2 1332 96 0 27 chr10 32443810 32443998 -113145290 - LTR8 LTR ERV1 -100 591 409 578 286 197 13 chr10 32443998 32444313 -113144975 - L2 LINE L2 -1415 1899 1527 2233 90 41 0 chr10 32444583 32444873 -113144415 - AluSx SINE Alu -10 302 1 1158 122 12 0 chr10 32444934 32445098 -113144190 - AluSg/x SINE Alu -12 298 133 1785 163 3 3 chr10 32445102 32445390 -113143898 - AluJb SINE Alu -24 288 1 639 217 32 26 chr10 32445402 32445578 -113143710 + L1P4 LINE L1 5593 5771 -403 2073 146 0 0 chr10 32445754 32446055 -113143233 + AluSx SINE Alu 1 301 -11 2054 163 0 0 chr10 32446070 32446376 -113142912 + AluSx SINE Alu 1 306 -6 1043 177 0 11 chr10 32446405 32446580 -113142708 + AluJo SINE Alu 1 173 -139 1987 125 66 0 chr10 32446862 32447151 -113142137 - AluSq SINE Alu -5 308 1 541 186 88 0 chr10 32447206 32447319 -113141969 - MER65C LTR ERV1 0 461 339 * 779 190 35 7 chr10 32447315 32447457 -113141831 - MER65C LTR ERV1 -313 148 3 192 231 0 0 chr10 32447817 32447856 -113141432 + MIR SINE MIR 35 73 -135 1974 160 3 3 chr10 32447912 32448224 -113141064 - AluSx SINE Alu 0 312 1 2324 107 3 0 chr10 32448707 32449007 -113140281 + AluSx SINE Alu 1 301 -11 2281 118 3 0 chr10 32449071 32449376 -113139912 + AluSp SINE Alu 1 306 -7 263 248 220 0 chr10 32449648 32449757 -113139531 - MIR SINE MIR -82 180 48 429 284 116 16 chr10 32449797 32449987 -113139301 + L1ME LINE L1 5597 5805 -316 306 158 58 12 chr10 32449992 32450163 -113139125 + (TA)n Simple_repeat Simple_repeat 1 179 0 400 218 47 18 chr10 32450183 32450353 -113138935 + (TA)n Simple_repeat Simple_repeat 2 176 0 588 121 0 0 chr10 32450355 32450446 -113138842 + (CA)n Simple_repeat Simple_repeat 2 92 0 841 214 19 0 chr10 32450452 32450611 -113138677 - FAM SINE Alu -13 162 1 307 243 9 56 chr10 32450620 32450727 -113138561 - MIR SINE MIR -11 251 150 2204 118 0 13 chr10 32450779 32451083 -113138205 + AluSx SINE Alu 1 300 -12 308 281 41 97 chr10 32451303 32451499 -113137789 + MER5A DNA MER1_type 4 188 -1 1582 188 53 0 chr10 32451564 32451846 -113137442 - AluJo SINE Alu -10 302 6 236 54 54 0 chr10 32451889 32451926 -113137362 + T-rich Low_complexity Low_complexity 2 40 0 746 162 0 0 chr10 32451928 32452045 -113137243 - FLAM_C SINE Alu -15 118 2 1295 146 130 24 chr10 32452329 32452483 -113136805 - AluJo SINE Alu 0 301 165 207 0 0 0 chr10 32452483 32452506 -113136782 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1295 146 130 24 chr10 32452506 32452625 -113136663 - AluJo SINE Alu -136 165 1 2114 139 0 0 chr10 32453156 32453457 -113135831 + AluSx SINE Alu 1 301 -11 1164 74 23 0 chr10 32453479 32453655 -113135633 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 2083 136 3 3 chr10 32453660 32453970 -113135318 + AluSx SINE Alu 2 311 -1 189 245 38 0 chr10 32454437 32454490 -113134798 - MIR SINE MIR -133 129 75 482 127 0 0 chr10 32454672 32454743 -113134545 - Alu SINE Alu -9 301 231 519 255 79 47 chr10 32454863 32455141 -113134147 + L2 LINE L2 3027 3313 0 262 325 61 31 chr10 32455912 32456075 -113133213 + MIR SINE MIR 30 197 -65 344 314 8 8 chr10 32456201 32456319 -113132969 - MIR SINE MIR -102 160 43 1764 103 0 56 chr10 32456744 32456881 -113132407 + AluSq SINE Alu 1 120 -193 2223 92 0 21 chr10 32456881 32457207 -113132081 + AluSg SINE Alu 3 322 0 1764 103 0 56 chr10 32457207 32457320 -113131968 + AluSq SINE Alu 120 238 -75 1289 171 30 34 chr10 32457352 32457616 -113131672 + AluJo SINE Alu 35 297 -15 1483 217 40 42 chr10 32457673 32457989 -113131299 + MER63B DNA MER1_type 1 317 -745 1790 153 0 0 chr10 32457989 32458257 -113131031 - AluJb SINE Alu -11 301 34 1483 217 40 42 chr10 32458257 32458341 -113130947 + MER63B DNA MER1_type 317 400 -36 365 248 72 20 chr10 32459045 32459198 -113130090 + MIR SINE MIR 102 262 0 2147 138 0 0 chr10 32459214 32459518 -113129770 - AluSq SINE Alu -7 306 3 700 181 8 15 chr10 32459620 32459753 -113129535 + FLAM_C SINE Alu 2 133 -10 1125 200 77 82 chr10 32459893 32459946 -113129342 + MLT1A1 LTR MaLR 1 53 -312 3843 111 57 23 chr10 32459946 32460066 -113129222 - MER41B LTR ERV1 0 635 521 2250 102 20 0 chr10 32460066 32460359 -113128929 + AluSx SINE Alu 1 299 -13 3843 111 57 23 chr10 32460359 32460852 -113128436 - MER41B LTR ERV1 -114 521 1 1125 200 77 82 chr10 32460852 32461163 -113128125 + MLT1A1 LTR MaLR 53 363 -2 2118 138 13 0 chr10 32461328 32461633 -113127655 - AluSx SINE Alu -3 309 1 1521 178 34 14 chr10 32461640 32461933 -113127355 - AluJb SINE Alu -13 299 1 21 0 0 0 chr10 32461984 32462005 -113127283 + AT_rich Low_complexity Low_complexity 1 21 0 2298 105 0 10 chr10 32462296 32462600 -113126688 + AluSx SINE Alu 1 301 -11 702 146 0 0 chr10 32463784 32463887 -113125401 - FRAM SINE Alu -11 165 63 3744 78 58 37 chr10 32463887 32464461 -113124827 - LTR61 LTR ERV1 -9 586 1 1073 132 15 71 chr10 32464462 32464659 -113124629 - AluJb SINE Alu -126 186 1 2183 133 0 0 chr10 32464684 32464992 -113124296 + AluSx SINE Alu 2 309 -3 2191 121 3 3 chr10 32465021 32465327 -113123961 - AluSp SINE Alu -7 306 1 1900 126 0 21 chr10 32466243 32466528 -113122760 + AluJb SINE Alu 6 284 -28 428 0 19 0 chr10 32466528 32466580 -113122708 + (CATA)n Simple_repeat Simple_repeat 2 54 0 26 0 0 0 chr10 32467546 32467572 -113121716 + AT_rich Low_complexity Low_complexity 1 26 0 2363 70 3 0 chr10 32467572 32467859 -113121429 + AluSp SINE Alu 1 288 -25 1989 113 13 10 chr10 32467859 32468161 -113121127 - AluJo SINE Alu -3 309 7 279 0 0 0 chr10 32468296 32468327 -113120961 + (GA)n Simple_repeat Simple_repeat 1 31 0 26 23 0 23 chr10 32470854 32470879 -113118409 + AT_rich Low_complexity Low_complexity 1 26 -17 2297 67 32 0 chr10 32470879 32471161 -113118127 - AluSq SINE Alu -22 291 1 26 23 0 23 chr10 32471161 32471179 -113118109 + AT_rich Low_complexity Low_complexity 26 43 0 249 237 17 0 chr10 32471905 32471964 -113117324 + U7 snRNA snRNA 3 62 -1 771 233 0 59 chr10 32472650 32472869 -113116419 - MIR SINE MIR -26 236 31 297 208 69 0 chr10 32474001 32474073 -113115215 + MIR3 SINE MIR 110 186 -22 2045 134 3 0 chr10 32474845 32475144 -113114144 + AluSx SINE Alu 1 300 -12 2374 100 0 0 chr10 32476942 32477241 -113112047 - AluSx SINE Alu -13 299 1 376 263 60 24 chr10 32478073 32478235 -113111053 - L2 LINE L2 -213 3059 2893 536 326 4 34 chr10 32478616 32478852 -113110436 - L3 LINE CR1 -1 1576 1348 546 294 87 5 chr10 32478909 32479127 -113110161 + MIR SINE MIR 13 248 -14 183 328 0 0 chr10 32479541 32479608 -113109680 + L3 LINE CR1 622 688 -889 1999 136 7 7 chr10 32479693 32479988 -113109300 + AluJb SINE Alu 2 296 -16 1649 83 5 0 chr10 32480042 32480246 -113109042 + AluSp SINE Alu 77 281 -32 207 88 0 0 chr10 32480248 32480282 -113109006 + (TAAAA)n Simple_repeat Simple_repeat 4 37 0 190 255 0 0 chr10 32480454 32480501 -113108787 + L3b LINE CR1 1186 1232 -351 504 232 144 10 chr10 32480642 32480836 -113108452 + MIR SINE MIR 31 250 -12 2238 96 0 43 chr10 32480898 32481222 -113108066 + AluSx SINE Alu 1 310 -2 204 267 59 50 chr10 32481482 32481583 -113107705 + L2 LINE L2 3169 3270 -2 761 168 0 0 chr10 32481860 32481973 -113107315 - FLAM_C SINE Alu -25 118 6 2200 125 3 0 chr10 32482038 32482341 -113106947 + AluSx SINE Alu 1 304 -8 23 33 0 0 chr10 32482494 32482524 -113106764 + AT_rich Low_complexity Low_complexity 1 30 0 446 243 0 0 chr10 32482540 32482655 -113106633 - L1ME2 LINE L1 0 6164 6053 24 0 0 0 chr10 32482671 32482695 -113106593 + AT_rich Low_complexity Low_complexity 1 24 0 741 189 0 0 chr10 32482699 32482831 -113106457 - FLAM_C SINE Alu 0 133 2 223 329 24 0 chr10 32482903 32482988 -113106300 + L2 LINE L2 3209 3295 -18 2089 112 7 3 chr10 32484195 32484528 -113104760 - AluSx SINE Alu 0 312 1 1448 245 87 32 chr10 32484560 32485022 -113104266 + L1ME3A LINE L1 5556 6042 -128 1190 123 0 0 chr10 32485034 32485205 -113104083 - AluSg/x SINE Alu -5 305 135 327 257 44 0 chr10 32485221 32485334 -113103954 + L1ME3A LINE L1 6053 6170 0 1178 132 11 6 chr10 32485430 32485604 -113103684 - AluSx SINE Alu -137 175 1 2121 116 0 35 chr10 32486595 32486906 -113102382 + AluSq SINE Alu 1 300 -13 23 33 0 0 chr10 32487390 32487420 -113101868 + AT_rich Low_complexity Low_complexity 1 30 0 202 283 0 0 chr10 32487675 32487721 -113101567 - L2 LINE L2 -17 3255 3210 1678 159 45 24 chr10 32487847 32487983 -113101305 + AluJo SINE Alu 1 133 -179 2371 84 3 0 chr10 32487983 32488279 -113101009 + AluSp SINE Alu 1 297 -16 1678 159 45 24 chr10 32488279 32488431 -113100857 + AluJo SINE Alu 133 295 -17 1757 165 23 13 chr10 32488464 32488773 -113100515 - AluSx SINE Alu 0 312 1 473 278 78 58 chr10 32488828 32489019 -113100269 - MIR SINE MIR -51 211 17 28 48 0 0 chr10 32489019 32489061 -113100227 + AT_rich Low_complexity Low_complexity 1 42 0 605 182 0 70 chr10 32489539 32489682 -113099606 + FLAM_C SINE Alu 1 133 0 554 114 44 9 chr10 32489682 32489796 -113099492 + GA-rich Low_complexity Low_complexity 3 120 0 1120 152 13 100 chr10 32490134 32490365 -113098923 + AluJo SINE Alu 85 295 -17 637 121 2 4 chr10 32491961 32492092 -113097196 - L1MB1 LINE L1 -1 6167 6053 623 167 0 0 chr10 32492501 32492597 -113096691 - FLAM_C SINE Alu -21 122 27 2288 84 0 0 chr10 32492597 32492883 -113096405 + AluSg SINE Alu 10 295 -15 27 29 0 0 chr10 32492979 32493013 -113096275 + AT_rich Low_complexity Low_complexity 1 34 0 240 147 0 0 chr10 32493662 32493696 -113095592 + Alu SINE Alu 247 280 -21 186 43 0 0 chr10 32493696 32493719 -113095569 + (T)n Simple_repeat Simple_repeat 1 23 0 605 104 52 0 chr10 32494501 32494597 -113094691 - AluSg/x SINE Alu -6 306 206 1198 130 0 0 chr10 32494620 32494789 -113094499 - AluSc SINE Alu -20 289 121 1117 72 0 0 chr10 32494937 32495075 -113094213 - AluSq/x SINE Alu -174 138 1 2425 84 0 0 chr10 32495147 32495455 -113093833 - AluSg SINE Alu -2 308 1 204 362 35 21 chr10 32495694 32495835 -113093453 + MIR3 SINE MIR 2 144 -64 207 273 18 0 chr10 32495844 32495899 -113093389 - MIR3 SINE MIR -28 180 125 555 156 55 46 chr10 32496021 32496130 -113093158 + AluJo/FLAM SINE Alu 1 110 -202 2542 50 0 0 chr10 32496130 32496427 -113092861 - AluSg SINE Alu -13 297 1 231 281 61 12 chr10 32496461 32496543 -113092745 + MLT1K LTR MaLR 313 398 -190 494 254 35 18 chr10 32496857 32497026 -113092262 - MLT1K LTR MaLR -18 570 399 989 189 92 32 chr10 32497435 32497716 -113091572 - L1MC4 LINE L1 -2 8040 7743 225 264 66 0 chr10 32497789 32497880 -113091408 - L1MC4 LINE L1 -312 7730 7634 221 386 6 43 chr10 32498123 32498286 -113091002 - L2 LINE L2 -34 3238 3082 514 274 44 9 chr10 32498847 32499065 -113090223 + L1ME1 LINE L1 5931 6161 -5 587 168 63 0 chr10 32499097 32499240 -113090048 + L1MB5 LINE L1 5179 5330 -816 2098 166 77 0 chr10 32499249 32499664 -113089624 + L1MB5 LINE L1 5587 6033 -141 792 301 93 5 chr10 32500335 32500754 -113088534 - LTR16B LTR ERVL -4 460 5 2396 68 3 7 chr10 32502494 32502801 -113086487 + AluSp SINE Alu 1 306 -7 22 35 0 0 chr10 32506083 32506112 -113083176 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr10 32506813 32506834 -113082454 + AT_rich Low_complexity Low_complexity 1 21 0 1942 139 22 27 chr10 32506937 32507273 -113082015 - L1MC/D LINE L1 -703 5630 5295 2277 100 7 0 chr10 32507273 32507582 -113081706 - AluSq SINE Alu -2 311 1 1942 139 22 27 chr10 32507582 32507612 -113081676 - L1MC/D LINE L1 -1038 5295 5266 1501 161 7 4 chr10 32507636 32507915 -113081373 - L1MA7 LINE L1 -11 6280 6001 1652 101 65 0 chr10 32507915 32508191 -113081097 - L1PA13 LINE L1 -8 6155 5860 822 287 127 19 chr10 32508628 32508997 -113080291 + MLT1I LTR MaLR 1 409 0 847 190 83 5 chr10 32509212 32509417 -113079871 - L1MD2 LINE L1 -396 5963 5743 471 167 0 0 chr10 32509561 32509651 -113079637 + T-rich Low_complexity Low_complexity 1 90 0 275 279 58 0 chr10 32510934 32511020 -113078268 + L2 LINE L2 3161 3251 -21 4562 145 55 21 chr10 32521475 32522346 -113066942 + L1MA4 LINE L1 5395 6295 -5 2331 177 24 9 chr10 32522368 32522821 -113066467 + MER4D LTR ERV1 421 880 -23 29 70 0 0 chr10 32536860 32536917 -113052371 + AT_rich Low_complexity Low_complexity 1 57 0 282 290 7 76 chr10 32538829 32538974 -113050314 + MIR SINE MIR 10 144 -118 259 317 69 0 chr10 32540429 32540530 -113048758 + MIR SINE MIR 85 192 -70 668 267 19 6 chr10 32540656 32540817 -113048471 - MIR SINE MIR -75 187 25 335 218 103 0 chr10 32541145 32541232 -113048056 - L2 LINE L2 -2 3270 3175 299 53 0 0 chr10 32545423 32545461 -113043827 + (TA)n Simple_repeat Simple_repeat 2 39 0 2161 110 0 32 chr10 32545461 32545770 -113043518 - AluSg SINE Alu -11 299 1 1866 177 0 3 chr10 32545781 32546069 -113043219 - AluJo SINE Alu -25 287 1 278 358 8 30 chr10 32546076 32546210 -113043078 - MIR3 SINE MIR -67 141 11 2300 317 61 37 chr10 32550307 32551643 -113037645 + HERVL LTR ERVL 2832 4199 -1455 1614 54 19 0 chr10 32551649 32551854 -113037434 - MER11A LTR ERVK 0 1266 1058 1733 131 0 16 chr10 32553528 32553780 -113035508 - AluJb SINE Alu -64 248 1 23 22 0 44 chr10 32553783 32553802 -113035486 + AT_rich Low_complexity Low_complexity 1 19 -24 2113 141 0 0 chr10 32553802 32554108 -113035180 + AluSx SINE Alu 1 306 -6 23 22 0 44 chr10 32554108 32554133 -113035155 + AT_rich Low_complexity Low_complexity 19 43 0 350 229 124 26 chr10 32554172 32554325 -113034963 - L1 LINE L1 -2208 3938 3771 21 57 0 0 chr10 32554442 32554477 -113034811 + AT_rich Low_complexity Low_complexity 1 35 0 361 309 104 44 chr10 32554566 32554883 -113034405 - L1 LINE L1 -2701 3445 3110 3214 17 0 0 chr10 32558184 32558732 -113030556 + L1P1 LINE L1 5014 5561 -594 332 277 54 9 chr10 32562249 32562361 -113026927 - MIR SINE MIR -113 149 33 218 256 33 56 chr10 32562443 32562483 -113026805 + MIR SINE MIR 105 144 -118 2920 147 9 9 chr10 32562483 32562911 -113026377 - MSTC LTR MaLR 0 428 1 218 256 33 56 chr10 32562911 32562960 -113026328 + MIR SINE MIR 144 192 -70 1349 76 4 44 chr10 32572327 32572552 -113016736 + HERVK9 LTR ERVK 3725 3940 -1976 2030 132 3 12 chr10 32572553 32572879 -113016409 + HERVK9 LTR ERVK 4583 4905 -1011 252 54 54 0 chr10 32572875 32572912 -113016376 - HERVK9 LTR ERVK -115 5801 5763 * 2516 69 0 3 chr10 32572913 32573216 -113016072 + AluY SINE Alu 1 302 -9 2367 92 0 16 chr10 32573370 32573686 -113015602 + AluSq SINE Alu 1 311 -2 863 130 30 0 chr10 32573690 32573821 -113015467 + AluJo SINE Alu 1 135 -177 22 0 0 0 chr10 32573821 32573843 -113015445 + AT_rich Low_complexity Low_complexity 1 22 0 3023 142 17 4 chr10 32577676 32578154 -113011134 - MER41B LTR ERV1 0 635 152 1695 105 0 13 chr10 32578154 32578393 -113010895 - AluSq SINE Alu -7 306 71 343 182 18 0 chr10 32581334 32581389 -113007899 + AluJ/FLAM SINE Alu 10 65 -237 1645 109 102 82 chr10 32585617 32585920 -113003368 - AluSx SINE Alu -3 309 1 9508 64 9 0 chr10 32588478 32589688 -112999600 - L1P LINE L1 -1145 5001 3781 2185 111 3 0 chr10 32593243 32593540 -112995748 + AluSx SINE Alu 4 301 -11 27 0 0 0 chr10 32595384 32595411 -112993877 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr10 32599203 32599231 -112990057 + AT_rich Low_complexity Low_complexity 1 28 0 311 218 0 13 chr10 32599270 32599348 -112989940 - HAL1 LINE L1 -302 2205 2129 3517 19 0 0 chr10 32599408 32599786 -112989502 - L1PA2 LINE L1 -4 6151 5774 2244 101 3 3 chr10 32599860 32600157 -112989131 - AluSq SINE Alu -16 297 1 333 191 0 0 chr10 32600362 32600409 -112988879 + T-rich Low_complexity Low_complexity 1 47 0 601 333 67 28 chr10 32600509 32600836 -112988452 - L2 LINE L2 -941 2373 2034 2081 119 20 0 chr10 32604993 32605286 -112984002 + AluSx SINE Alu 1 299 -13 211 313 9 120 chr10 32605292 32605509 -112983779 - L2 LINE L2 -2760 554 362 1393 243 181 24 chr10 32607980 32608482 -112980806 - MER20B DNA MER1_type -182 601 21 735 270 35 11 chr10 32608526 32608700 -112980588 + MER45A DNA AcHobo 1 178 0 456 88 44 0 chr10 32613848 32613916 -112975372 - BC200 scRNA scRNA -128 72 2 261 305 80 7 chr10 32613951 32614102 -112975186 - Charlie7 DNA MER1_type -16 2596 2435 2068 160 22 8 chr10 32614553 32614909 -112974379 + L1MB8 LINE L1 5818 6178 0 341 315 151 20 chr10 32616867 32617013 -112972275 + MER5A DNA MER1_type 19 183 -6 717 214 60 45 chr10 32618490 32618691 -112970597 + MER3 DNA MER1_type 6 209 0 447 277 60 42 chr10 32618762 32618928 -112970360 - MIR SINE MIR -92 170 2 225 326 146 0 chr10 32623095 32623184 -112966104 + MIR SINE MIR 29 130 -78 236 526 0 0 chr10 32624678 32624754 -112964534 + T-rich Low_complexity Low_complexity 1 76 0 291 293 123 0 chr10 32625203 32625309 -112963979 - L2 LINE L2 -1 3271 3153 23 0 0 0 chr10 32625553 32625576 -112963712 + AT_rich Low_complexity Low_complexity 1 23 0 2873 66 11 0 chr10 32625585 32625964 -112963324 + L1PA6 LINE L1 5801 6154 0 183 233 116 0 chr10 32629994 32630037 -112959251 - L2 LINE L2 -2095 1219 1172 445 282 209 45 chr10 32632795 32633345 -112955943 - L1M2 LINE L1 -5769 1080 441 842 76 0 23 chr10 32639545 32639677 -112949611 - Harlequin LTR ERV1 -4961 1935 1807 258 263 200 0 chr10 32639683 32639763 -112949525 + LTR8 LTR ERV1 158 253 -438 2417 54 6 13 chr10 32639765 32640080 -112949208 - Harlequin LTR ERV1 -5176 1720 1408 2387 67 60 0 chr10 32640060 32640391 -112948897 - Harlequin LTR ERV1 -6283 613 263 * 2570 88 34 26 chr10 32640384 32640768 -112948520 - Harlequin LTR ERV1 -6509 387 1 1944 180 120 31 chr10 32640768 32641218 -112948070 - LTR2B LTR ERV1 0 490 1 1952 134 7 0 chr10 32641218 32641495 -112947793 - AluSx SINE Alu -33 279 1 838 107 21 0 chr10 32641538 32641678 -112947610 + (TTCC)n Simple_repeat Simple_repeat 3 145 0 280 83 0 0 chr10 32641682 32641718 -112947570 + (TC)n Simple_repeat Simple_repeat 1 36 0 2067 134 10 0 chr10 32641718 32642016 -112947272 - AluSx SINE Alu -5 307 7 180 0 0 0 chr10 32642103 32642123 -112947165 + (CA)n Simple_repeat Simple_repeat 1 20 0 1208 208 148 48 chr10 32642134 32642595 -112946693 - MER97b DNA MER1_type? -269 784 278 794 203 27 0 chr10 32642595 32642743 -112946545 + FRAM SINE Alu 2 153 -23 239 179 75 0 chr10 32642751 32642818 -112946470 - MER97c DNA MER1_type? -794 296 225 2193 106 0 0 chr10 32642818 32643133 -112946155 + AluSx SINE Alu 1 315 0 227 280 68 15 chr10 32643334 32643466 -112945822 + L2 LINE L2 2895 3033 -239 388 328 54 24 chr10 32643515 32643659 -112945629 + LTR33 LTR ERVL 20 158 -363 1937 148 7 10 chr10 32643659 32643962 -112945326 - AluJb SINE Alu -5 307 6 388 328 54 24 chr10 32643962 32644263 -112945025 + LTR33 LTR ERVL 158 512 -9 189 0 0 0 chr10 32645032 32645053 -112944235 + (TTTAA)n Simple_repeat Simple_repeat 4 24 0 1619 182 27 30 chr10 32645066 32645363 -112943925 + AluJo SINE Alu 2 297 -15 2325 97 10 0 chr10 32645391 32645689 -112943599 + AluSq SINE Alu 6 306 -7 2153 130 3 0 chr10 32645697 32645989 -112943299 + AluSg SINE Alu 1 293 -17 2288 99 0 3 chr10 32645997 32646299 -112942989 + AluY SINE Alu 1 301 -10 32298 60 2 18 chr10 32646715 32650826 -112938462 + Harlequin LTR ERV1 1913 5961 -935 640 100 36 45 chr10 32650824 32650934 -112938354 + Harlequin LTR ERV1 6788 6896 0 * 2171 162 89 33 chr10 32650935 32651393 -112937895 + LTR2B LTR ERV1 7 490 0 529 118 0 0 chr10 32651501 32651577 -112937711 + LTR2B LTR ERV1 415 490 0 1806 159 48 0 chr10 32651698 32651993 -112937295 - AluSx SINE Alu -1 311 3 3582 128 2 13 chr10 32652501 32653034 -112936254 + MER1A DNA MER1_type 1 527 0 2152 113 0 0 chr10 32653261 32653543 -112935745 - AluSx SINE Alu -17 295 14 229 26 26 26 chr10 32653778 32653817 -112935471 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 472 135 10 58 chr10 32653837 32653941 -112935347 + AluJb SINE Alu 213 311 -1 2039 124 16 19 chr10 32654154 32654461 -112934827 - AluSq SINE Alu -7 306 1 21 0 0 0 chr10 32654752 32654773 -112934515 + AT_rich Low_complexity Low_complexity 1 21 0 32 26 0 0 chr10 32654983 32655022 -112934266 + AT_rich Low_complexity Low_complexity 1 39 0 759 167 0 8 chr10 32655022 32655142 -112934146 - FLAM_C SINE Alu -13 120 2 208 247 12 12 chr10 32655195 32655276 -112934012 + (TA)n Simple_repeat Simple_repeat 1 81 0 2193 116 31 0 chr10 32655314 32655607 -112933681 + AluSx SINE Alu 1 302 -10 761 209 35 54 chr10 32655612 32655871 -112933417 + MER97c DNA MER1_type? 837 1090 0 2399 101 3 0 chr10 32656067 32656373 -112932915 - AluSp SINE Alu -6 307 1 1968 156 0 0 chr10 32656375 32656733 -112932555 - AluSx SINE Alu 0 312 1 659 183 38 23 chr10 32656733 32656864 -112932424 - AluJo/FLAM SINE Alu -169 133 1 1851 172 10 0 chr10 32657891 32658188 -112931100 + AluJb SINE Alu 1 300 -12 266 261 52 35 chr10 32658527 32658642 -112930646 + L2 LINE L2 2937 3053 -219 806 181 0 0 chr10 32658834 32658961 -112930327 + FLAM_C SINE Alu 1 127 -16 21 36 0 0 chr10 32659107 32659135 -112930153 + AT_rich Low_complexity Low_complexity 1 28 0 722 148 99 77 chr10 32659137 32659319 -112929969 - AluJo SINE Alu -5 307 122 2039 119 7 0 chr10 32659780 32660066 -112929222 + AluSx SINE Alu 14 301 -11 252 77 0 0 chr10 32661251 32661290 -112927998 + (CA)n Simple_repeat Simple_repeat 2 40 0 1156 182 5 14 chr10 32661500 32661714 -112927574 + AluJo SINE Alu 87 298 -14 2160 111 0 19 chr10 32661736 32662043 -112927245 + AluSg SINE Alu 1 301 -9 596 195 55 8 chr10 32662808 32662936 -112926352 - MER94 DNA DNA 0 134 1 185 355 124 0 chr10 32663476 32663597 -112925691 + L2 LINE L2 3137 3272 0 994 184 12 0 chr10 32663960 32664123 -112925165 + FRAM SINE Alu 1 165 -11 1457 121 0 0 chr10 32664137 32664335 -112924953 + AluSg SINE Alu 1 198 -112 605 136 0 0 chr10 32664335 32664423 -112924865 - AluS SINE Alu -224 89 2 2026 100 50 4 chr10 32665001 32665281 -112924007 - AluSg SINE Alu -17 293 1 1126 153 1 28 chr10 32665817 32666126 -112923162 + MLT1A1 LTR MaLR 1 365 0 2232 116 3 0 chr10 32666402 32666703 -112922585 + AluSx SINE Alu 1 302 -10 788 188 0 0 chr10 32667368 32667501 -112921787 - FLAM_C SINE Alu 0 133 1 196 284 248 9 chr10 32667927 32668036 -112921252 + MIR SINE MIR 20 154 -108 2430 92 0 0 chr10 32668044 32668369 -112920919 + L1PB2 LINE L1 5542 5866 -285 262 91 0 0 chr10 32668369 32668431 -112920857 - Alu SINE Alu 0 314 253 234 0 0 0 chr10 32668493 32668519 -112920769 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 655 188 7 29 chr10 32668720 32669038 -112920250 + GA-rich Low_complexity Low_complexity 1 310 0 598 134 6 52 chr10 32669043 32669215 -112920073 + (GGAA)n Simple_repeat Simple_repeat 1 164 0 324 260 19 29 chr10 32669450 32669554 -112919734 - MER112 DNA MER1_type -6 254 152 338 212 71 18 chr10 32669564 32669677 -112919611 + MER91C DNA MER1_type 1 119 -21 243 167 20 187 chr10 32669700 32669850 -112919438 - MER112 DNA MER1_type -134 126 2 338 253 11 11 chr10 32670279 32670366 -112918922 + LTR67 LTR ERVL 464 550 -7 770 131 8 8 chr10 32670643 32670765 -112918523 - AluJ SINE Alu -9 303 182 804 160 15 0 chr10 32670765 32670896 -112918392 - AluJ SINE Alu -179 133 1 692 244 42 67 chr10 32672182 32672281 -112917007 - L1PB4 LINE L1 0 6156 6056 2495 72 0 0 chr10 32672281 32672574 -112916714 - AluSg SINE Alu -17 293 1 692 244 42 67 chr10 32672574 32672712 -112916576 - L1PB4 LINE L1 -100 6056 5925 217 279 93 81 chr10 32672888 32673135 -112916153 + L2 LINE L2 2641 2890 -424 737 243 49 52 chr10 32673203 32673491 -112915797 - HAL1 LINE L1 -36 2471 2185 2038 135 0 22 chr10 32673533 32673851 -112915437 + AluJo SINE Alu 1 311 -1 304 252 126 0 chr10 32673862 32673965 -112915323 - HAL1 LINE L1 -321 2186 2071 661 144 0 0 chr10 32673986 32674083 -112915205 + FLAM_A SINE Alu 30 126 -16 2308 110 0 0 chr10 32674085 32674377 -112914911 + AluSx SINE Alu 1 292 -20 182 348 54 0 chr10 32674859 32674971 -112914317 + MIR SINE MIR 128 245 -17 735 255 30 5 chr10 32675001 32675201 -112914087 + MIR SINE MIR 23 227 -35 1643 174 54 3 chr10 32675221 32675515 -112913773 + AluJb SINE Alu 2 310 -2 207 0 0 0 chr10 32675931 32675954 -112913334 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2092 103 59 0 chr10 32676406 32676696 -112912592 - AluSx SINE Alu -5 307 1 1841 157 7 3 chr10 32676712 32677029 -112912259 - AluJo SINE Alu 0 318 1 1145 114 0 40 chr10 32677180 32677355 -112911933 + AluSg/x SINE Alu 135 302 -8 2285 103 0 0 chr10 32677869 32678161 -112911127 - AluSx SINE Alu -20 292 1 261 284 0 0 chr10 32678755 32678822 -112910466 + MIR SINE MIR 36 102 -160 2055 121 9 35 chr10 32678929 32679244 -112910044 + AluSx SINE Alu 3 309 -3 525 244 28 50 chr10 32679251 32679431 -112909857 + L1MC5 LINE L1 7733 7908 -53 212 167 0 0 chr10 32679543 32679585 -112909703 + T-rich Low_complexity Low_complexity 1 42 0 281 353 0 8 chr10 32680170 32680303 -112908985 - MER117 DNA MER1_type -65 132 1 182 184 0 0 chr10 32680315 32680353 -112908935 - MIR SINE MIR -122 140 103 718 222 0 0 chr10 32680669 32680795 -112908493 - FLAM_C SINE Alu -16 127 2 2189 144 0 3 chr10 32680830 32681143 -112908145 - AluSx SINE Alu 0 312 1 180 176 0 0 chr10 32681204 32681238 -112908050 + CT-rich Low_complexity Low_complexity 2 35 0 1904 139 43 0 chr10 32681255 32681536 -112907752 + AluJb SINE Alu 1 293 -19 276 231 144 70 chr10 32681679 32681908 -112907380 + L2 LINE L2 2917 3162 -110 2282 86 0 0 chr10 32681928 32682206 -112907082 + AluSx SINE Alu 22 299 -13 1657 192 14 11 chr10 32682272 32682419 -112906869 - AluJo SINE Alu -24 288 138 1491 117 0 45 chr10 32682419 32682641 -112906647 - AluSq SINE Alu -101 212 1 1657 192 14 11 chr10 32682641 32682780 -112906508 - AluJo SINE Alu -174 138 1 402 307 43 50 chr10 32682816 32683003 -112906285 - L1M4 LINE L1 -1672 4474 4288 2038 135 20 0 chr10 32683003 32683299 -112905989 + AluJb SINE Alu 1 302 -10 402 307 43 50 chr10 32683299 32683411 -112905877 - L1M4 LINE L1 -1858 4288 4177 34 42 0 0 chr10 32683413 32683461 -112905827 + AT_rich Low_complexity Low_complexity 1 48 0 1610 161 4 8 chr10 32683468 32683728 -112905560 - AluJb SINE Alu -49 263 5 254 352 48 14 chr10 32683735 32683880 -112905408 - L1M4 LINE L1 -1963 4183 4034 537 299 112 20 chr10 32684211 32684515 -112904773 + ERVL LTR ERVL 1051 1382 -3614 289 307 111 26 chr10 32684635 32684788 -112904500 + ERVL LTR ERVL 1585 1750 -3246 22 0 0 0 chr10 32684796 32684818 -112904470 + AT_rich Low_complexity Low_complexity 1 22 0 675 191 0 0 chr10 32684818 32684933 -112904355 - FLAM_A SINE Alu -18 115 1 291 350 85 17 chr10 32684942 32685119 -112904169 + ERVL LTR ERVL 1769 1957 -3697 336 293 46 71 chr10 32685193 32685278 -112904010 + ERVL LTR ERVL 3895 3981 -1673 2197 116 3 7 chr10 32685278 32685580 -112903708 - AluSx SINE Alu -11 301 1 336 293 46 71 chr10 32685580 32685758 -112903530 + ERVL LTR ERVL 3981 4161 -1493 607 316 18 0 chr10 32685770 32685941 -112903347 + ERVL LTR ERVL 2096 2269 -3495 678 329 17 8 chr10 32685970 32686207 -112903081 + ERVL LTR ERVL 2345 2583 -3181 255 355 0 7 chr10 32686774 32686926 -112902362 + (CCA)n Simple_repeat Simple_repeat 2 152 0 2007 158 0 3 chr10 32687038 32687336 -112901952 - AluSx SINE Alu -15 297 1 1358 196 4 8 chr10 32688011 32688276 -112901012 + L1MB3 LINE L1 4700 4963 -1183 3102 131 327 32 chr10 32688278 32688996 -112900292 - MER21A LTR ERV1 -1 930 1 376 157 56 74 chr10 32688996 32689041 -112900247 + L1MB3 LINE L1 4960 5004 -1142 2164 121 0 7 chr10 32689041 32689346 -112899942 + AluSq SINE Alu 1 303 -10 376 157 56 74 chr10 32689346 32689408 -112899880 + L1MB3 LINE L1 5004 5065 -1081 4760 143 13 36 chr10 32689425 32689891 -112899397 + L1MB3 LINE L1 5304 5742 -441 2151 126 0 16 chr10 32689891 32690065 -112899223 - AluSg SINE Alu -5 305 137 2192 82 7 7 chr10 32690065 32690358 -112898930 - AluY SINE Alu -18 293 1 2151 126 0 16 chr10 32690358 32690493 -112898795 - AluSg SINE Alu -173 137 1 4760 143 13 36 chr10 32690493 32690877 -112898411 + L1MB3 LINE L1 5742 6134 -49 644 140 0 0 chr10 32690877 32690970 -112898318 - FRAM SINE Alu -28 148 56 6155 107 164 16 chr10 32691109 32692173 -112897115 + MER11B LTR ERVK 1 1222 -14 2264 112 0 0 chr10 32692178 32692474 -112896814 - AluSx SINE Alu -16 296 1 535 139 0 0 chr10 32692655 32692734 -112896554 - AluSx SINE Alu -12 300 222 1263 85 0 0 chr10 32692751 32692904 -112896384 - AluSx SINE Alu -159 153 1 2162 106 0 3 chr10 32692960 32693242 -112896046 + AluSc SINE Alu 1 281 -28 309 43 22 0 chr10 32693242 32693288 -112896000 + (TAAA)n Simple_repeat Simple_repeat 2 80 0 494 222 24 16 chr10 32693608 32693734 -112895554 + AluSq/x SINE Alu 19 145 -167 598 202 0 8 chr10 32693736 32693860 -112895428 + AluY SINE Alu 189 311 0 1009 141 0 33 chr10 32693860 32694044 -112895244 + AluSx SINE Alu 121 298 -14 208 143 0 0 chr10 32694252 32694287 -112895001 + (T)n Simple_repeat Simple_repeat 1 35 0 303 323 133 31 chr10 32694485 32694680 -112894608 - MIR SINE MIR 0 262 48 2101 105 0 3 chr10 32695017 32695312 -112893976 + AluSx SINE Alu 1 294 -18 256 230 95 40 chr10 32695439 32695513 -112893775 + MER45C DNA AcHobo 1 78 -875 850 207 21 21 chr10 32695581 32695774 -112893514 - AluJb SINE Alu -3 309 117 328 274 177 18 chr10 32695774 32695887 -112893401 + MER45C DNA AcHobo 141 271 -682 2063 134 0 0 chr10 32695971 32696292 -112892996 + AluSx SINE Alu 1 312 0 427 212 121 10 chr10 32696389 32696488 -112892800 + L2 LINE L2 3204 3313 0 2179 125 0 0 chr10 32696669 32696972 -112892316 - AluSx SINE Alu -9 303 1 2339 97 3 0 chr10 32696973 32697293 -112891995 - L1PA13 LINE L1 -467 5696 5376 3553 73 11 0 chr10 32697293 32697750 -112891538 + L1PA13 LINE L1 5692 6163 0 255 305 35 64 chr10 32698428 32698569 -112890719 + L3b LINE CR1 1230 1366 -217 26 0 0 0 chr10 32698580 32698606 -112890682 + AT_rich Low_complexity Low_complexity 1 26 0 1224 176 38 109 chr10 32698621 32698934 -112890354 - AluJo SINE Alu -21 291 1 224 312 43 11 chr10 32699036 32699129 -112890159 - L2 LINE L2 -4 3309 3214 236 277 67 25 chr10 32699249 32699368 -112889920 + L1MEd LINE L1 3 126 -5993 207 0 0 0 chr10 32699697 32699720 -112889568 + (CA)n Simple_repeat Simple_repeat 2 24 0 1341 128 5 0 chr10 32699790 32699993 -112889295 + AluSq SINE Alu 103 306 -7 312 254 89 83 chr10 32700107 32700276 -112889012 + L1MEd LINE L1 523 692 -5427 2134 104 0 3 chr10 32700276 32700573 -112888715 + AluSc SINE Alu 1 296 -13 386 245 96 59 chr10 32700596 32700918 -112888370 + L1MEd LINE L1 873 1206 -4913 1605 175 28 0 chr10 32700920 32701206 -112888082 + AluJb SINE Alu 1 294 -18 1346 157 0 0 chr10 32701206 32701422 -112887866 + AluSp SINE Alu 2 217 -96 2037 112 7 3 chr10 32701495 32701791 -112887497 + AluSq SINE Alu 1 297 -16 260 305 8 39 chr10 32701809 32701937 -112887351 + HAL1 LINE L1 1449 1572 -935 2107 89 0 26 chr10 32702169 32702471 -112886817 - AluSq SINE Alu -19 294 1 2140 112 0 0 chr10 32702472 32702766 -112886522 - AluSx SINE Alu -18 294 1 372 225 25 0 chr10 32703746 32703826 -112885462 - MER5B DNA MER1_type -73 105 24 655 192 0 32 chr10 32703833 32703958 -112885330 + MER77 LTR ERV1 1 121 -484 2031 112 3 0 chr10 32703961 32704256 -112885032 - AluSx SINE Alu -16 296 1 21 0 0 0 chr10 32704353 32704374 -112884914 + AT_rich Low_complexity Low_complexity 1 21 0 1971 136 0 3 chr10 32705242 32705543 -112883745 - AluSx SINE Alu -12 300 1 763 193 0 36 chr10 32705629 32705795 -112883493 - AluJb SINE Alu -9 303 144 1564 118 169 0 chr10 32706267 32706522 -112882766 + AluSx SINE Alu 1 298 -4 1904 138 0 13 chr10 32706665 32706969 -112882319 - AluSx SINE Alu -12 300 1 284 355 28 57 chr10 32707037 32707319 -112881969 + L2 LINE L2 2596 2869 -445 227 339 119 9 chr10 32707380 32707489 -112881799 + L2 LINE L2 2948 3068 -204 1831 53 4 4 chr10 32707806 32708034 -112881254 - AluSg/x SINE Alu -13 297 70 1894 132 7 7 chr10 32708084 32708379 -112880909 - AluJb SINE Alu -16 296 2 208 328 0 0 chr10 32708464 32708531 -112880757 - L3 LINE CR1 -889 688 622 * 233 362 102 39 chr10 32708522 32708903 -112880385 + L3 LINE CR1 880 1284 -293 2284 77 3 3 chr10 32709438 32709737 -112879551 + AluSx SINE Alu 1 299 -13 23 33 0 0 chr10 32710221 32710251 -112879037 + AT_rich Low_complexity Low_complexity 1 30 0 218 283 0 0 chr10 32710506 32710552 -112878736 - L2 LINE L2 -17 3255 3210 825 164 0 0 chr10 32710678 32710806 -112878482 + FLAM_C SINE Alu 1 128 -5 2072 116 0 3 chr10 32710814 32711107 -112878181 + AluSx SINE Alu 1 292 -20 920 156 13 118 chr10 32712088 32712325 -112876963 + AluJo SINE Alu 85 296 -16 685 122 2 4 chr10 32713921 32714054 -112875234 - L1MB1 LINE L1 -1 6167 6051 635 154 0 132 chr10 32714462 32714558 -112874730 - FLAM_C SINE Alu -190 122 48 2168 91 0 0 chr10 32714558 32714843 -112874445 + AluSg SINE Alu 10 294 -16 635 154 0 132 chr10 32714843 32714882 -112874406 - FLAM_C SINE Alu -264 48 5 887 172 197 5 chr10 32715448 32715651 -112873637 - AluSq SINE Alu -71 242 1 1750 173 0 10 chr10 32716538 32716844 -112872444 + AluJo SINE Alu 1 303 -9 2192 106 0 0 chr10 32717587 32717888 -112871400 - AluSx SINE Alu -11 301 1 1545 173 0 22 chr10 32719801 32720079 -112869209 + AluJb SINE Alu 21 292 -20 424 274 31 88 chr10 32720279 32720505 -112868783 - MIR SINE MIR -29 233 21 606 143 76 0 chr10 32720584 32720689 -112868599 + MER69A DNA AcHobo 1 113 -64 1009 176 98 25 chr10 32720689 32720835 -112868453 - L1PB3 LINE L1 -7 6147 5980 2102 112 0 20 chr10 32720835 32721140 -112868148 - AluSx SINE Alu -13 299 1 1009 176 98 25 chr10 32721140 32721197 -112868091 - L1PB3 LINE L1 -174 5980 5929 1648 105 0 0 chr10 32721357 32721585 -112867703 - AluSg/x SINE Alu 0 310 83 1203 178 23 0 chr10 32721931 32722150 -112867138 + AluJo SINE Alu 86 309 -3 192 151 170 38 chr10 32722897 32722950 -112866338 - L3 LINE CR1 -144 1433 1374 2060 103 0 13 chr10 32723128 32723429 -112865859 + AluSq SINE Alu 2 298 -15 3143 166 23 27 chr10 32723542 32724199 -112865089 - L1 LINE L1 -1280 4866 4213 1678 161 13 13 chr10 32725185 32725490 -112863798 + AluJo SINE Alu 1 305 -7 1704 110 100 4 chr10 32726132 32726413 -112862875 - AluSq SINE Alu -5 308 1 2186 113 0 0 chr10 32726493 32726794 -112862494 - AluSx SINE Alu -11 301 1 1534 168 20 37 chr10 32726797 32726984 -112862304 - AluJo SINE Alu -20 292 110 2142 121 0 0 chr10 32726984 32727281 -112862007 + AluSg SINE Alu 1 297 -13 1534 168 20 37 chr10 32727281 32727390 -112861898 - AluJo SINE Alu -202 110 1 205 274 14 41 chr10 32727512 32727585 -112861703 + MIR3 SINE MIR 125 195 -13 198 362 35 21 chr10 32727576 32727717 -112861571 - MIR3 SINE MIR -64 144 2 * 2265 91 3 0 chr10 32727956 32728263 -112861025 + AluSg SINE Alu 1 308 -2 1908 129 0 0 chr10 32728418 32728690 -112860598 + AluSx SINE Alu 1 272 -40 1436 197 41 55 chr10 32728791 32729157 -112860131 + MLT1B LTR MaLR 30 390 0 484 313 33 62 chr10 32729227 32729595 -112859693 + MLT1K LTR MaLR 226 582 -6 2140 74 0 21 chr10 32730682 32730965 -112858323 - AluSg SINE Alu -24 286 10 628 167 0 0 chr10 32730965 32731061 -112858227 + FLAM_C SINE Alu 27 122 -21 2131 120 0 7 chr10 32732565 32732873 -112856415 - AluSx SINE Alu -6 306 1 1723 85 162 4 chr10 32733073 32733332 -112855956 + AluSg SINE Alu 1 300 0 445 266 5 43 chr10 32733342 32733526 -112855762 + AluSg/x SINE Alu 121 297 -15 1442 153 9 123 chr10 32734368 32734708 -112854580 + AluJo SINE Alu 2 302 0 2174 105 3 3 chr10 32734882 32735188 -112854100 - AluSx SINE Alu -6 306 1 262 86 0 0 chr10 32735601 32735636 -112853652 - U2 snRNA snRNA -153 35 1 492 170 75 21 chr10 32735713 32735807 -112853481 + MER50 LTR ERV1 1 99 -635 930 93 0 0 chr10 32735807 32735957 -112853331 - AluSg/x SINE Alu 0 301 152 2147 85 3 31 chr10 32735975 32736293 -112852995 - AluSp SINE Alu -4 309 1 3799 131 45 3 chr10 32736295 32736890 -112852398 + MER50 LTR ERV1 92 711 -23 281 218 0 0 chr10 32736956 32737011 -112852277 - L1MC5 LINE L1 -90 7871 7817 499 263 56 33 chr10 32737019 32737232 -112852056 - L1ME3A LINE L1 -5 6165 5948 51 42 0 0 chr10 32737336 32737408 -112851880 + AT_rich Low_complexity Low_complexity 1 72 0 1346 145 0 9 chr10 32737415 32737636 -112851652 + AluJo SINE Alu 71 289 -23 318 222 101 95 chr10 32737641 32737830 -112851458 - L1MC5 LINE L1 -263 7698 7509 245 258 0 0 chr10 32738160 32738222 -112851066 + L2 LINE L2 2990 3051 -221 2059 112 0 0 chr10 32738327 32738613 -112850675 - AluSx SINE Alu -26 286 1 228 333 0 0 chr10 32738668 32738737 -112850551 + L2 LINE L2 3242 3310 -3 2041 125 3 28 chr10 32738823 32739143 -112850145 - AluSx SINE Alu 0 312 1 24 32 0 0 chr10 32739338 32739369 -112849919 + AT_rich Low_complexity Low_complexity 1 31 0 1967 131 20 0 chr10 32739457 32739817 -112849471 + AluSx SINE Alu 1 312 0 350 240 162 48 chr10 32740203 32740393 -112848895 - MLT1H LTR MaLR 0 549 345 1286 148 8 30 chr10 32740397 32740462 -112848826 + AluSg/x SINE Alu 70 135 -175 2016 116 3 0 chr10 32740462 32740772 -112848516 + AluSq SINE Alu 2 312 0 1286 148 8 30 chr10 32740772 32740942 -112848346 + AluSg/x SINE Alu 135 301 -9 239 182 0 0 chr10 32740942 32740986 -112848302 + L1MC3 LINE L1 7144 7187 -598 1773 202 9 12 chr10 32741033 32741375 -112847913 + L1MC3 LINE L1 7175 7515 -270 578 126 42 11 chr10 32741378 32741473 -112847815 + AluJ/FLAM SINE Alu 2 99 -213 1310 178 119 7 chr10 32741540 32741809 -112847479 + AluJo SINE Alu 1 299 -13 965 174 6 0 chr10 32741810 32741977 -112847311 + L1MC3 LINE L1 7510 7677 -108 1753 149 7 3 chr10 32742226 32742508 -112846780 - AluJb SINE Alu -29 283 1 925 127 35 12 chr10 32742658 32742831 -112846457 - Charlie3 DNA MER1_type -18 2692 2516 209 213 49 0 chr10 32742883 32742944 -112846344 + (TA)n Simple_repeat Simple_repeat 1 64 0 2603 128 50 26 chr10 32742953 32743070 -112846218 - MER1A DNA MER1_type -2269 433 320 2896 149 68 52 chr10 32743070 32743543 -112845745 + LTR9 LTR ERV1 1 488 -124 2343 108 0 0 chr10 32743543 32743849 -112845439 - AluSx SINE Alu -6 306 1 2896 149 68 52 chr10 32743849 32743977 -112845311 + LTR9 LTR ERV1 488 612 0 2603 128 50 26 chr10 32743977 32744282 -112845006 - MER1A DNA MER1_type -2382 320 1 1312 158 83 142 chr10 32744396 32744890 -112844398 + MER4C LTR ERV1 1 465 0 24 0 0 0 chr10 32745762 32745786 -112843502 + AT_rich Low_complexity Low_complexity 1 24 0 195 42 0 0 chr10 32745795 32745819 -112843469 + (TTA)n Simple_repeat Simple_repeat 1 24 0 826 138 0 46 chr10 32745819 32745949 -112843339 - FLAM_C SINE Alu -19 124 1 2085 130 3 0 chr10 32745953 32746245 -112843043 - AluSq SINE Alu -20 293 1 226 229 48 57 chr10 32746346 32746451 -112842837 - HAL1b LINE L1 -12 1336 1233 1917 163 0 13 chr10 32746531 32746837 -112842451 - 7SLRNA srpRNA srpRNA -14 306 5 346 176 0 0 chr10 32746837 32746888 -112842400 - FRAM/FAM SINE Alu -117 49 1 2199 117 10 0 chr10 32747408 32747698 -112841590 - AluSx SINE Alu -19 293 1 758 181 0 0 chr10 32747856 32747983 -112841305 + FLAM_A SINE Alu 1 127 -6 367 285 8 16 chr10 32748088 32748234 -112841054 + FRAM SINE Alu 25 153 -13 2136 106 51 0 chr10 32748406 32748698 -112840590 - AluSx SINE Alu -5 307 1 213 141 16 47 chr10 32748749 32748813 -112840475 + CT-rich Low_complexity Low_complexity 4 65 0 1505 239 42 13 chr10 32748823 32749275 -112840013 - L1MC5 LINE L1 -493 7468 7004 2153 106 7 3 chr10 32749573 32749865 -112839423 - AluSc SINE Alu -16 293 1 234 286 54 18 chr10 32749866 32749978 -112839310 - MIR SINE MIR -115 147 32 284 314 0 20 chr10 32750123 32750225 -112839063 + L2 LINE L2 2595 2694 -620 2156 309 67 77 chr10 32750277 32752833 -112836455 + HERVI LTR ERV1 5128 7656 -129 4199 197 51 18 chr10 32753806 32754629 -112834659 - L1MB8 LINE L1 -5 6173 5379 1663 167 4 18 chr10 32754629 32754904 -112834384 - AluJb SINE Alu -12 300 30 4199 197 51 18 chr10 32754904 32755255 -112834033 - L1MB8 LINE L1 -799 5379 5041 1720 167 3 39 chr10 32755255 32755425 -112833863 - AluJb SINE Alu -16 296 140 2329 122 0 0 chr10 32755425 32755737 -112833551 - AluSx SINE Alu 0 312 1 1720 167 3 39 chr10 32755737 32755871 -112833417 - AluJb SINE Alu -172 140 3 4199 197 51 18 chr10 32755871 32756392 -112832896 - L1MB8 LINE L1 -1137 5041 4425 924 154 0 0 chr10 32756392 32756535 -112832753 - FRAM SINE Alu -6 170 28 1790 178 3 3 chr10 32756571 32756863 -112832425 + AluJb SINE Alu 1 292 -20 23 33 0 0 chr10 32756863 32756893 -112832395 + AT_rich Low_complexity Low_complexity 1 30 0 2248 123 0 0 chr10 32756946 32757255 -112832033 - AluSx SINE Alu -3 309 1 1688 208 46 3 chr10 32757256 32757607 -112831681 - L1MC1 LINE L1 -9 6324 5959 4292 240 14 6 chr10 32757623 32758679 -112830609 - L1MC1 LINE L1 -1011 5135 4071 277 258 22 11 chr10 32758677 32758766 -112830522 - L1MB8 LINE L1 -1762 4384 4295 * 2004 146 3 13 chr10 32759015 32759330 -112829958 - AluSx SINE Alu 0 312 1 1938 156 32 51 chr10 32759548 32759606 -112829682 + MLT1A1 LTR MaLR 1 59 -306 2342 99 0 0 chr10 32759606 32759899 -112829389 + AluSc SINE Alu 1 293 -16 1938 156 32 51 chr10 32759899 32760212 -112829076 + MLT1A1 LTR MaLR 59 365 0 1168 118 72 5 chr10 32760495 32760690 -112828598 + MER83C LTR ERV1 2 209 -164 281 205 36 12 chr10 32760812 32760895 -112828393 - MER53 DNA DNA -82 107 23 * 319 195 37 0 chr10 32760825 32760907 -112828381 + MER53 DNA DNA 105 189 0 293 241 25 0 chr10 32761269 32761348 -112827940 - MIR3 SINE MIR -34 174 94 911 177 23 23 chr10 32761404 32761579 -112827709 + LTR9 LTR ERV1 438 612 0 1288 72 0 6 chr10 32761590 32761756 -112827532 + MER41-int LTR ERV1 4838 5002 -944 607 178 10 0 chr10 32761758 32761859 -112827429 + MSTD LTR MaLR 246 347 -49 601 203 45 38 chr10 32762269 32762402 -112826886 - MER20 DNA MER1_type -36 183 50 717 128 4 0 chr10 32762402 32762519 -112826769 + L1PB4 LINE L1 5685 5789 -367 25 65 0 0 chr10 32762525 32762571 -112826717 + AT_rich Low_complexity Low_complexity 1 46 0 278 126 50 44 chr10 32762578 32762737 -112826551 + (TATAA)n Simple_repeat Simple_repeat 5 164 0 30 69 0 20 chr10 32762744 32762808 -112826480 + AT_rich Low_complexity Low_complexity 1 65 -34 2318 146 13 5 chr10 32762808 32763185 -112826103 + L1PB4 LINE L1 5776 6155 -1 1884 157 0 10 chr10 32763193 32763486 -112825802 + AluSx SINE Alu 1 290 -22 30 69 0 20 chr10 32763486 32763513 -112825775 + AT_rich Low_complexity Low_complexity 72 99 0 639 157 0 0 chr10 32763520 32763622 -112825666 + FRAM SINE Alu 1 101 -75 21 0 0 0 chr10 32763629 32763650 -112825638 + AT_rich Low_complexity Low_complexity 1 21 0 1986 139 41 0 chr10 32764779 32765074 -112824214 + AluSg SINE Alu 1 307 -3 22 0 0 0 chr10 32765085 32765107 -112824181 + AT_rich Low_complexity Low_complexity 1 22 0 1182 141 77 56 chr10 32765507 32765706 -112823582 - L1PB4 LINE L1 -1 6155 5949 1698 163 71 0 chr10 32765706 32765988 -112823300 - AluJb SINE Alu -10 302 1 1182 141 77 56 chr10 32765988 32766022 -112823266 - L1PB4 LINE L1 -207 5949 5917 838 207 224 46 chr10 32766319 32766592 -112822696 + L1MC4 LINE L1 6888 7238 -804 2395 78 3 3 chr10 32766592 32766888 -112822400 + AluSc SINE Alu 1 296 -13 838 207 224 46 chr10 32766888 32766962 -112822326 + L1MC4 LINE L1 7238 7297 -745 722 229 6 22 chr10 32766962 32767145 -112822143 - AluJb SINE Alu -3 309 130 280 176 163 0 chr10 32767544 32767633 -112821655 - MIR SINE MIR -58 150 46 202 266 0 31 chr10 32768826 32768890 -112820398 + (CATA)n Simple_repeat Simple_repeat 2 63 0 1138 140 0 0 chr10 32769109 32769273 -112820015 + FRAM SINE Alu 1 164 -12 207 281 0 16 chr10 32769636 32769700 -112819588 + L2 LINE L2 3206 3268 -4 1079 151 6 0 chr10 32769870 32770036 -112819252 - FRAM SINE Alu -9 167 1 263 216 20 0 chr10 32770051 32770102 -112819186 - MERVL LTR ERVL -2713 2772 2721 * 688 264 110 35 chr10 32770100 32770327 -112818961 - MERVL LTR ERVL -3445 2319 2076 3031 88 20 5 chr10 32770334 32770732 -112818556 + MLT2A1 LTR ERVL 1 404 -40 288 186 0 0 chr10 32770742 32770801 -112818487 + (CA)n Simple_repeat Simple_repeat 2 60 0 433 55 0 0 chr10 32770805 32770860 -112818428 + MLT2A1 LTR ERVL 399 453 0 976 316 29 33 chr10 32770922 32771458 -112817830 - MERVL LTR ERVL -3052 1944 1346 274 289 13 0 chr10 32771792 32771868 -112817420 - MER116 DNA Mariner 0 80 4 899 130 0 15 chr10 32772003 32772134 -112817154 + FLAM_C SINE Alu 5 133 0 2276 113 0 10 chr10 32772649 32772951 -112816337 + AluSx SINE Alu 1 299 -13 227 257 46 55 chr10 32773202 32773311 -112815977 + L2 LINE L2 2867 2974 -339 325 277 22 51 chr10 32773410 32773547 -112815741 + MIR SINE MIR 93 225 -37 317 248 152 29 chr10 32773572 32773677 -112815611 - MIR3 SINE MIR -15 193 76 2532 67 0 3 chr10 32774712 32775012 -112814276 + AluSp SINE Alu 3 301 -12 506 284 22 11 chr10 32775093 32775276 -112814012 + MIR SINE MIR 8 192 -70 1289 172 13 0 chr10 32775284 32775511 -112813777 - MER83C LTR ERV1 0 373 144 847 169 14 0 chr10 32775611 32775759 -112813529 - AluJb SINE Alu -10 302 153 2036 76 0 4 chr10 32776045 32776340 -112812948 + AluSq SINE Alu 35 328 0 326 307 114 0 chr10 32777317 32777457 -112811831 + MIR SINE MIR 60 215 -47 1900 150 10 19 chr10 32777595 32777902 -112811386 - AluJo SINE Alu -8 304 1 367 265 38 30 chr10 32778470 32778602 -112810686 - MIR SINE MIR -113 149 17 373 282 35 33 chr10 32778763 32778926 -112810362 - MIR SINE MIR -62 146 16 2007 139 4 0 chr10 32779545 32779864 -112809424 - AluSx SINE Alu 0 320 1 2254 223 42 8 chr10 32780401 32780899 -112808389 + LTR40a LTR ERVL 4 518 -1 2130 125 0 0 chr10 32781347 32781651 -112807637 - AluSg SINE Alu 0 304 1 518 209 22 50 chr10 32781655 32781794 -112807494 + Charlie1b DNA MER1_type 86 220 -303 405 278 160 7 chr10 32782098 32782242 -112807046 + MIR SINE MIR 20 185 -77 473 265 116 43 chr10 32782342 32782644 -112806644 - L3 LINE CR1 -84 1493 1170 2236 108 0 0 chr10 32783781 32784078 -112805210 - AluSx SINE Alu -15 297 1 369 43 0 0 chr10 32784549 32784596 -112804692 + (TC)n Simple_repeat Simple_repeat 2 48 0 1921 103 48 15 chr10 32784598 32784899 -112804389 - AluSx SINE Alu 0 310 1 32 81 0 0 chr10 32785059 32785133 -112804155 + AT_rich Low_complexity Low_complexity 1 74 0 827 210 0 22 chr10 32785227 32785408 -112803880 + FRAM SINE Alu 1 176 0 2572 77 0 0 chr10 32785413 32785724 -112803564 + AluY SINE Alu 1 311 0 1826 127 10 41 chr10 32785810 32786102 -112803186 + AluSx SINE Alu 5 287 -25 626 195 26 77 chr10 32786216 32786411 -112802877 + L1MC5 LINE L1 6730 6914 -1047 2227 113 0 7 chr10 32786420 32786720 -112802568 + AluSx SINE Alu 1 298 -14 412 202 135 0 chr10 32786760 32786864 -112802424 + MIR SINE MIR 144 261 -1 1123 45 0 8 chr10 32787248 32787380 -112801908 + AluSq/x SINE Alu 1 131 -181 829 166 0 7 chr10 32788314 32788453 -112800835 + FLAM_C SINE Alu 5 142 -1 373 354 0 0 chr10 32788480 32788607 -112800681 - MER20B DNA MER1_type -528 255 129 327 310 51 19 chr10 32788773 32788931 -112800357 - MIR SINE MIR -71 191 29 6496 91 37 1 chr10 32789908 32790857 -112798431 + L1PA11 LINE L1 5191 6172 -2 22 0 0 0 chr10 32791526 32791548 -112797740 + AT_rich Low_complexity Low_complexity 1 22 0 1854 151 6 31 chr10 32791843 32792162 -112797126 - AluJb SINE Alu -1 311 1 203 282 45 90 chr10 32792501 32792588 -112796700 - MIR3 SINE MIR -42 166 88 2831 111 46 14 chr10 32792588 32793020 -112796268 + MER83 LTR ERV1 3 448 0 203 282 45 90 chr10 32793020 32793088 -112796200 - MIR3 SINE MIR -120 88 18 1466 291 98 20 chr10 32793434 32793666 -112795622 + L2 LINE L2 1892 2105 -1209 1218 165 102 133 chr10 32793666 32794146 -112795142 + MER4C LTR ERV1 1 465 0 1466 291 98 20 chr10 32794146 32794744 -112794544 + L2 LINE L2 2105 2786 -528 419 278 71 66 chr10 32795129 32795327 -112793961 + L2 LINE L2 3112 3310 -3 2279 121 0 0 chr10 32795342 32795647 -112793641 - AluSx SINE Alu 0 312 1 1348 259 74 22 chr10 32795846 32796305 -112792983 + MLT1F LTR MaLR 60 542 0 237 277 42 42 chr10 32796316 32796435 -112792853 - MIR SINE MIR -105 157 39 274 362 0 0 chr10 32799427 32799532 -112789756 + L2 LINE L2 2260 2364 -950 218 235 198 0 chr10 32799535 32799616 -112789672 + L2 LINE L2 3170 3266 -6 2422 158 44 17 chr10 32799731 32800207 -112789081 + L1PB3 LINE L1 5660 6148 -6 979 196 108 49 chr10 32800345 32800631 -112788657 - AluSp SINE Alu 0 303 1 1226 88 35 0 chr10 32800631 32800801 -112788487 - LTR39 LTR ERV1 -607 176 1 2115 110 7 0 chr10 32801179 32801469 -112787819 + AluSg SINE Alu 11 302 -8 2078 98 0 62 chr10 32801778 32802083 -112787205 - AluSx SINE Alu -24 288 3 1097 201 87 84 chr10 32802406 32802424 -112786864 + LTR37B LTR ERV1 3 19 -449 1664 133 65 34 chr10 32802424 32802718 -112786570 + AluJo SINE Alu 3 305 -7 1097 201 87 84 chr10 32802718 32803161 -112786127 + LTR37B LTR ERV1 19 465 -3 1718 169 7 33 chr10 32803324 32803631 -112785657 - AluJo SINE Alu -13 299 1 2386 120 31 11 chr10 32803806 32804163 -112785125 - THE1B LTR MaLR 0 364 1 275 311 22 0 chr10 32804238 32804328 -112784960 - MER5B DNA MER1_type -4 174 83 1209 112 19 0 chr10 32804354 32804515 -112784773 - AluSg/x SINE Alu -15 297 134 2053 91 66 3 chr10 32804515 32804801 -112784487 - AluY SINE Alu -7 304 1 218 279 0 0 chr10 32804802 32804863 -112784425 + MER5B DNA MER1_type 116 176 -2 261 222 0 0 chr10 32805325 32805379 -112783909 + C-rich Low_complexity Low_complexity 4 57 0 974 163 6 12 chr10 32806214 32806386 -112782902 - FRAM SINE Alu -10 166 1 210 254 113 0 chr10 32806471 32806542 -112782746 - MIR SINE MIR -108 154 76 2375 77 10 10 chr10 32806775 32807074 -112782214 - AluSq SINE Alu -14 299 1 1548 202 0 14 chr10 32807828 32808105 -112781183 - AluJb SINE Alu -39 273 1 209 336 67 0 chr10 32808480 32808599 -112780689 + MIR SINE MIR 80 206 -56 1921 152 3 7 chr10 32808711 32809001 -112780287 - AluJo SINE Alu -23 289 1 215 261 70 52 chr10 32809008 32809123 -112780165 - L2 LINE L2 -16 3297 3181 1391 89 26 0 chr10 32809882 32810072 -112779216 + MER30 DNA MER1_type 1 195 -35 1926 75 0 4 chr10 32810218 32810470 -112778818 + L1PA8 LINE L1 5805 6055 -117 771 164 0 0 chr10 32810474 32810590 -112778698 - FLAM_C SINE Alu -22 121 6 1640 138 99 11 chr10 32811106 32811526 -112777762 + AluSx SINE Alu 5 449 0 1691 201 0 3 chr10 32812066 32812364 -112776924 - AluJb SINE Alu -15 297 1 834 219 51 20 chr10 32812425 32812621 -112776667 - MER58A DNA MER1_type 0 224 23 2463 58 0 3 chr10 32813304 32813597 -112775691 - AluY SINE Alu -19 292 1 2267 101 10 125 chr10 32813680 32814175 -112775113 - Tigger2 DNA MER2_type 0 2718 3 1020 154 63 91 chr10 32815766 32816019 -112773269 - AluJo SINE Alu -6 306 61 615 226 8 0 chr10 32816038 32816171 -112773117 + MLT1E2 LTR MaLR 65 198 -428 1525 243 78 23 chr10 32816213 32816646 -112772642 - MLT1E2 LTR MaLR -3 623 167 374 189 83 136 chr10 32816681 32816813 -112772475 + AluJb SINE Alu 49 173 -129 697 354 32 17 chr10 32817004 32817349 -112771939 - LTR33 LTR ERVL -171 350 1 601 272 19 0 chr10 32817350 32817512 -112771776 + HAL1 LINE L1 1669 1833 -674 * 1190 259 51 38 chr10 32817507 32817569 -112771719 - L1MEc LINE L1 -3309 2906 2846 3384 134 35 2 chr10 32817569 32818077 -112771211 - MER1A DNA MER1_type 0 527 3 1190 259 51 38 chr10 32818077 32818643 -112770645 - L1MEc LINE L1 -3369 2846 2230 1005 194 22 0 chr10 32818649 32818829 -112770459 - MER58A DNA MER1_type -4 220 37 2704 235 92 59 chr10 32818846 32818895 -112770393 - L1MEc LINE L1 -4123 2273 2227 2223 118 0 10 chr10 32818895 32819209 -112770079 - AluY SINE Alu 0 311 1 2704 235 92 59 chr10 32819209 32819881 -112769407 - L1MEc LINE L1 -4169 2227 1579 1629 146 30 61 chr10 32819881 32820176 -112769112 - AluJo SINE Alu -26 286 1 2704 235 92 59 chr10 32820176 32820880 -112768408 - L1MEc LINE L1 -4817 1579 800 2608 130 5 5 chr10 32820894 32821294 -112767994 - LTR43 LTR ERV1 0 602 203 327 167 197 0 chr10 32821300 32821366 -112767922 - MER58A DNA MER1_type -28 79 1 493 259 80 42 chr10 32821368 32821636 -112767652 + MER69 DNA AcHobo 2168 2449 -77 11514 33 0 0 chr10 32821636 32823743 -112765545 - L1PA4 LINE L1 -3 6152 4046 493 259 80 42 chr10 32823743 32823763 -112765525 + MER69 DNA AcHobo 2449 2467 -59 2484 90 3 0 chr10 32823770 32824081 -112765207 - AluSx SINE Alu 0 312 1 241 217 78 52 chr10 32824720 32824835 -112764453 + MIR SINE MIR 140 257 -5 685 89 105 16 chr10 32824911 32825035 -112764253 - AluYa5 SINE Alu -176 135 1 710 247 19 0 chr10 32825557 32825719 -112763569 + MER3 DNA MER1_type 1 165 -44 2539 173 61 19 chr10 32825726 32825889 -112763399 - L1MA9 LINE L1 0 6312 6157 219 36 0 0 chr10 32825889 32825917 -112763371 + (GA)n Simple_repeat Simple_repeat 1 28 0 2539 173 61 19 chr10 32825917 32826291 -112762997 - L1MA9 LINE L1 -155 6157 5752 242 191 0 0 chr10 32826297 32826344 -112762944 + MER3 DNA MER1_type 154 200 -9 1017 289 35 8 chr10 32826389 32826763 -112762525 - L1ME4a LINE L1 -244 5877 5494 369 316 132 20 chr10 32826862 32827264 -112762024 + LTR16A LTR ERVL 1 447 -3 1751 174 30 10 chr10 32827429 32827728 -112761560 + AluJo SINE Alu 1 305 -7 1776 185 7 3 chr10 32827925 32828223 -112761065 - AluJo SINE Alu -13 299 1 493 84 0 56 chr10 32829665 32829772 -112759516 + (TTTC)n Simple_repeat Simple_repeat 4 104 0 222 271 17 0 chr10 32829779 32829838 -112759450 + C-rich Low_complexity Low_complexity 1 60 0 2181 188 161 128 chr10 32830031 32830146 -112759142 + L1MC3 LINE L1 6672 6782 -1003 2234 101 0 7 chr10 32830146 32830442 -112758846 + AluSc SINE Alu 1 294 -15 2181 188 161 128 chr10 32830442 32830764 -112758524 + L1MC3 LINE L1 6782 7092 -693 457 262 19 0 chr10 32830764 32830867 -112758421 + MLT1F1 LTR MaLR 45 149 -418 2181 188 161 128 chr10 32830867 32831330 -112757958 + L1MC3 LINE L1 7092 7709 -76 2050 160 0 0 chr10 32831778 32832090 -112757198 - AluJo SINE Alu 0 312 1 649 255 112 61 chr10 32833013 32833523 -112755765 - Charlie7 DNA MER1_type 0 2612 2077 925 283 145 2 chr10 32833531 32833930 -112755358 - L1MC/D LINE L1 -2002 5806 5351 617 200 0 31 chr10 32834069 32834199 -112755089 + AluJb SINE Alu 153 278 -34 21 0 0 0 chr10 32834200 32834221 -112755067 + AT_rich Low_complexity Low_complexity 1 21 0 2162 111 4 0 chr10 32834221 32834527 -112754761 + AluSg SINE Alu 1 307 0 408 398 0 0 chr10 32834691 32834862 -112754426 + MIR SINE MIR 67 237 -25 2345 101 3 0 chr10 32834909 32835216 -112754072 - AluSp SINE Alu -4 309 2 269 167 4 40 chr10 32835380 32835455 -112753833 + L1P1 LINE L1 5704 5776 -379 2222 85 0 7 chr10 32835950 32836273 -112753015 + AluSc SINE Alu 1 321 0 781 158 0 15 chr10 32836472 32836605 -112752683 + FLAM_C SINE Alu 3 133 0 1794 141 0 4 chr10 32837072 32837342 -112751946 + AluSx SINE Alu 42 310 -2 1686 160 38 21 chr10 32837364 32837652 -112751636 + AluJo SINE Alu 1 293 -19 247 235 0 44 chr10 32837743 32837811 -112751477 + MIR SINE MIR 83 147 -61 515 145 0 24 chr10 32838578 32838661 -112750627 + AluJ/FLAM SINE Alu 2 82 -230 834 109 9 0 chr10 32838764 32838874 -112750414 - FLAM_C SINE Alu -32 111 1 1913 86 35 0 chr10 32839134 32839390 -112749898 + AluY SINE Alu 46 310 -1 27 0 0 0 chr10 32839433 32839460 -112749828 + AT_rich Low_complexity Low_complexity 1 27 0 1011 158 54 49 chr10 32839626 32839806 -112749482 + AluJo SINE Alu 101 279 -33 180 0 0 0 chr10 32839806 32839826 -112749462 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 611 217 31 0 chr10 32839828 32839957 -112749331 + FLAM_C SINE Alu 1 133 0 1011 158 54 49 chr10 32839957 32839976 -112749312 + AluJo SINE Alu 279 304 -8 1267 71 0 11 chr10 32839980 32840162 -112749126 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 468 163 10 10 chr10 32840190 32840288 -112749000 + GA-rich Low_complexity Low_complexity 4 101 0 3573 220 27 23 chr10 32841897 32843545 -112745743 - L1MD3 LINE L1 -743 5403 4282 1379 160 0 5 chr10 32843690 32843903 -112745385 + AluSx SINE Alu 1 212 -100 284 245 0 4 chr10 32845110 32845351 -112743937 + (CA)n Simple_repeat Simple_repeat 1 239 0 661 316 103 43 chr10 32846013 32846939 -112742349 - L2 LINE L2 0 3313 2289 983 162 29 0 chr10 32847180 32847353 -112741935 + MER2 DNA MER2_type 2 179 -166 801 217 0 0 chr10 32847453 32847610 -112741678 - AluJb SINE Alu -142 170 14 1138 122 0 12 chr10 32847829 32848001 -112741287 + AluSg/x SINE Alu 122 291 -18 2189 82 4 0 chr10 32848004 32848353 -112740935 + AluY SINE Alu 1 350 0 314 287 20 0 chr10 32848949 32849050 -112740238 + L1M4 LINE L1 3081 3183 -2963 1585 181 7 10 chr10 32849196 32849495 -112739793 - AluJo SINE Alu -14 298 1 2173 94 0 3 chr10 32851986 32852284 -112737004 + AluSq SINE Alu 1 297 -16 1722 163 3 3 chr10 32852294 32852588 -112736700 + AluJb SINE Alu 1 294 -18 792 139 134 70 chr10 32852920 32853092 -112736196 + AluJo SINE Alu 15 197 -115 597 248 8 0 chr10 32853092 32853217 -112736071 + MER21B LTR ERV1 133 258 -605 1989 115 0 16 chr10 32853223 32853527 -112735761 + AluSc SINE Alu 2 300 -9 661 165 0 0 chr10 32853528 32853631 -112735657 + AluJo/FRAM SINE Alu 136 238 -74 2189 100 3 3 chr10 32854081 32854391 -112734897 - AluSq SINE Alu -3 310 1 22 0 0 0 chr10 32855959 32855981 -112733307 + AT_rich Low_complexity Low_complexity 1 22 0 1677 211 34 50 chr10 32855987 32856423 -112732865 + L1MB7 LINE L1 5668 6096 -88 1664 155 10 17 chr10 32856437 32856727 -112732561 + AluJo SINE Alu 2 289 -23 759 83 0 0 chr10 32856827 32856935 -112732353 + (GGAA)n Simple_repeat Simple_repeat 4 111 0 967 134 27 0 chr10 32856935 32857084 -112732204 + FRAM SINE Alu 1 150 -26 35 24 0 0 chr10 32857085 32857127 -112732161 + AT_rich Low_complexity Low_complexity 1 42 0 1811 54 0 0 chr10 32857261 32857483 -112731805 + L1PA5 LINE L1 5931 6152 -2 27 0 0 0 chr10 32857483 32857510 -112731778 + AT_rich Low_complexity Low_complexity 1 27 0 186 291 58 68 chr10 32859348 32859451 -112729837 - MIR SINE MIR -42 220 119 1689 167 0 25 chr10 32860165 32860483 -112728805 - AluJo SINE Alu -2 310 1 1288 179 21 0 chr10 32861958 32862192 -112727096 - L1MA6 LINE L1 -75 6225 5987 231 36 0 0 chr10 32862289 32862317 -112726971 + (CA)n Simple_repeat Simple_repeat 2 29 0 289 318 33 40 chr10 32864080 32864231 -112725057 - MIR SINE MIR -104 158 9 271 109 0 36 chr10 32864499 32864554 -112724734 + (TTCCC)n Simple_repeat Simple_repeat 2 54 0 338 192 0 13 chr10 32864584 32864662 -112724626 + CT-rich Low_complexity Low_complexity 1 77 0 2011 122 35 0 chr10 32864891 32865179 -112724109 - AluSx SINE Alu -14 298 1 456 271 131 37 chr10 32865802 32866016 -112723272 + MIR SINE MIR 20 253 -9 1546 153 0 77 chr10 32866395 32866531 -112722757 + AluJb SINE Alu 1 146 -166 2095 89 4 0 chr10 32866531 32866811 -112722477 + AluSp SINE Alu 1 281 -32 699 47 47 0 chr10 32866811 32866917 -112722371 + (GAAA)n Simple_repeat Simple_repeat 2 112 0 1546 153 0 77 chr10 32866917 32867092 -112722196 + AluJb SINE Alu 144 289 -23 1379 234 50 34 chr10 32867096 32867348 -112721940 + MER21B LTR ERV1 14 260 -603 2298 85 3 0 chr10 32867348 32867643 -112721645 + AluSc SINE Alu 1 296 -13 1379 234 50 34 chr10 32867643 32867981 -112721307 + MER21B LTR ERV1 260 718 -145 2034 100 4 0 chr10 32867990 32868269 -112721019 - L1PA12 LINE L1 -15 6153 5874 846 58 0 0 chr10 32868269 32868373 -112720915 + L1P4 LINE L1 5684 5787 -381 794 221 74 22 chr10 32868473 32868704 -112720584 + L1MD3 LINE L1 7737 7979 -16 745 266 70 4 chr10 32868705 32868961 -112720327 - Charlie7 DNA MER1_type -898 1714 1442 1092 189 37 37 chr10 32869331 32869601 -112719687 - L1MB5 LINE L1 -1 6173 5904 586 259 38 49 chr10 32869607 32869792 -112719496 + MER5A DNA MER1_type 1 183 -6 779 219 102 20 chr10 32870452 32870648 -112718640 - AluJb SINE Alu -100 212 1 296 272 62 0 chr10 32870779 32870860 -112718428 + L2 LINE L2 2230 2315 -999 656 173 0 0 chr10 32871890 32872037 -112717251 - FLAM_A SINE Alu 0 164 18 1978 129 26 3 chr10 32872453 32872756 -112716532 + AluSg SINE Alu 1 310 0 463 213 128 35 chr10 32872784 32872925 -112716363 + L2 LINE L2 3160 3313 0 3040 99 25 2 chr10 32873001 32873435 -112715853 + L1PB1 LINE L1 5708 6151 0 214 280 38 61 chr10 32874588 32874720 -112714568 + MIR SINE MIR 65 193 -69 361 313 123 5 chr10 32874828 32875023 -112714265 - MARNA DNA Mariner -135 451 234 231 291 78 29 chr10 32875054 32875157 -112714131 + MARNA DNA Mariner 448 555 -31 263 243 215 0 chr10 32875816 32875923 -112713365 - MIR3 SINE MIR -26 182 53 1649 180 0 26 chr10 32875952 32876263 -112713025 + AluJo SINE Alu 3 305 -7 335 203 0 14 chr10 32879754 32879828 -112709460 - Charlie5 DNA MER1_type -27 2585 2513 1215 119 0 10 chr10 32879929 32880130 -112709158 - AluSc SINE Alu 0 309 111 1269 171 13 0 chr10 32880230 32880464 -112708824 - L1MC1 LINE L1 -247 6086 5850 2116 103 10 0 chr10 32880465 32880885 -112708403 + AluSg SINE Alu 1 423 0 3484 192 20 18 chr10 32880885 32882250 -112707038 - L1MC1 LINE L1 -474 5859 4491 243 146 0 0 chr10 32883255 32883296 -112705992 + (CA)n Simple_repeat Simple_repeat 2 42 0 224 284 34 11 chr10 32884458 32884546 -112704742 + CT-rich Low_complexity Low_complexity 1 90 0 897 263 46 4 chr10 32884547 32884806 -112704482 - L1MC4 LINE L1 -152 7890 7621 841 188 26 86 chr10 32888857 32888907 -112700381 + MER58A DNA MER1_type 4 55 -2365 1679 169 0 25 chr10 32888907 32889221 -112700067 - AluJo SINE Alu -6 306 1 841 188 26 86 chr10 32889221 32889404 -112699884 + MER58A DNA MER1_type 55 223 -1 702 274 153 17 chr10 32890682 32891029 -112698259 - MLT1K LTR MaLR -174 414 21 229 335 147 13 chr10 32891646 32891870 -112697418 + L3 LINE CR1 1199 1452 -125 1121 74 0 14 chr10 32892098 32892246 -112697042 + LOR1b LTR ERV1 13 158 -303 1334 170 98 0 chr10 32892284 32892549 -112696739 + AluJb SINE Alu 21 311 -1 1028 129 6 0 chr10 32892565 32892728 -112696560 + LOR1a LTR ERV1 204 367 -130 27 29 0 0 chr10 32894256 32894290 -112694998 + AT_rich Low_complexity Low_complexity 1 34 0 1652 158 18 7 chr10 32895341 32895620 -112693668 + AluJo SINE Alu 1 282 -30 212 57 0 29 chr10 32895623 32895658 -112693630 + (TAAAA)n Simple_repeat Simple_repeat 2 35 0 197 224 75 30 chr10 32896096 32896163 -112693125 + MIR3 SINE MIR 5 74 -134 654 181 25 125 chr10 32896239 32896481 -112692807 + MLT1J LTR MaLR 110 409 -206 2193 76 4 0 chr10 32897059 32897335 -112691953 + AluSg SINE Alu 1 277 -33 312 70 0 0 chr10 32897339 32897382 -112691906 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 1775 164 26 0 chr10 32898150 32898454 -112690834 - AluJo SINE Alu 0 312 1 2144 114 0 0 chr10 32898885 32899175 -112690113 + AluSq SINE Alu 1 290 -23 25 0 0 0 chr10 32899179 32899204 -112690084 + AT_rich Low_complexity Low_complexity 1 25 0 347 228 76 58 chr10 32899848 32900019 -112689269 + MER5B DNA MER1_type 5 178 0 21 0 0 0 chr10 32902143 32902164 -112687124 + AT_rich Low_complexity Low_complexity 1 21 0 2189 119 0 0 chr10 32902421 32902724 -112686564 + AluSc SINE Alu 1 303 -6 200 349 75 9 chr10 32903477 32903583 -112685705 - MER5B DNA MER1_type 0 178 66 317 261 33 11 chr10 32905011 32905103 -112684185 + MIR SINE MIR 19 112 -150 850 161 40 7 chr10 32906260 32906409 -112682879 - AluJb SINE Alu -22 290 137 1972 133 3 0 chr10 32907049 32907351 -112681937 + AluSx SINE Alu 1 303 -9 454 200 24 0 chr10 32907472 32907557 -112681731 - MER4C LTR ERV1 0 465 379 947 158 58 12 chr10 32907559 32907730 -112681558 - THE1C LTR MaLR -196 179 1 276 288 0 0 chr10 32907733 32907799 -112681489 - LTR59 LTR ERV1 -177 420 355 * 718 210 160 13 chr10 32907771 32908009 -112681279 - MER4C LTR ERV1 -192 273 1 2135 82 17 0 chr10 32908045 32908336 -112680952 - AluSx SINE Alu -16 296 1 2622 51 57 3 chr10 32909895 32910245 -112679043 - L1PA13 LINE L1 -1 6162 5794 406 120 53 0 chr10 32910565 32910640 -112678648 + L1MA5A LINE L1 6214 6292 -5 345 47 0 0 chr10 32911263 32911306 -112677982 + (TG)n Simple_repeat Simple_repeat 2 44 0 1478 163 16 0 chr10 32911459 32911710 -112677578 + AluJb SINE Alu 1 255 -57 913 178 0 6 chr10 32911723 32911886 -112677402 + AluJo SINE Alu 120 281 -31 2377 163 20 26 chr10 32912096 32912556 -112676732 - LTR32 LTR ERVL 0 471 15 2031 151 0 0 chr10 32913211 32913523 -112675765 + AluJb SINE Alu 1 312 0 1688 174 0 4 chr10 32914043 32914369 -112674919 - AluJo SINE Alu 0 327 3 2164 151 20 13 chr10 32914585 32914975 -112674313 - L1MB3 LINE L1 -8 6175 5783 734 168 0 0 chr10 32915878 32915991 -112673297 + FLAM_C SINE Alu 1 113 -30 195 125 0 0 chr10 32915996 32916036 -112673252 + (T)n Simple_repeat Simple_repeat 1 40 0 680 213 0 0 chr10 32916143 32916301 -112672987 + AluJb SINE Alu 161 318 0 21 0 0 0 chr10 32916530 32916551 -112672737 + AT_rich Low_complexity Low_complexity 1 21 0 195 318 0 16 chr10 32917382 32917445 -112671843 + MIR SINE MIR 36 97 -165 23 33 0 0 chr10 32918204 32918234 -112671054 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr10 32918523 32918544 -112670744 + AT_rich Low_complexity Low_complexity 1 21 0 940 176 6 6 chr10 32918544 32918714 -112670574 + L1PA16 LINE L1 5997 6166 0 285 75 0 0 chr10 32918959 32918999 -112670289 + (TC)n Simple_repeat Simple_repeat 1 40 0 1935 133 3 0 chr10 32918999 32919292 -112669996 - AluJb SINE Alu -16 296 3 317 222 111 33 chr10 32919754 32919844 -112669444 - L2 LINE L2 -6 3266 3170 2244 87 0 7 chr10 32920167 32920467 -112668821 + AluSq SINE Alu 1 298 -15 270 176 0 0 chr10 32923141 32923192 -112666096 + CT-rich Low_complexity Low_complexity 4 54 0 624 62 0 0 chr10 32923195 32923276 -112666012 + (TCCA)n Simple_repeat Simple_repeat 4 84 0 2323 75 3 0 chr10 32924526 32924818 -112664470 - AluSc SINE Alu -16 293 1 21 0 0 0 chr10 32925456 32925477 -112663811 + AT_rich Low_complexity Low_complexity 1 21 0 2021 116 7 23 chr10 32925493 32925803 -112663485 + AluSc SINE Alu 1 305 -4 220 167 0 33 chr10 32926160 32926220 -112663068 + GA-rich Low_complexity Low_complexity 2 59 0 40 21 0 0 chr10 32926380 32926427 -112662861 + AT_rich Low_complexity Low_complexity 1 47 0 1416 162 0 78 chr10 32926427 32926723 -112662565 - AluJo SINE Alu -22 290 18 289 307 137 1 chr10 32928014 32928124 -112661164 + MIR SINE MIR 36 159 -50 361 207 81 45 chr10 32928148 32928259 -112661029 - MER63 DNA MER1_type -273 789 675 205 330 30 0 chr10 32928549 32928659 -112660629 - MIR SINE MIR -17 191 78 514 314 66 19 chr10 32929891 32930162 -112659126 + L3 LINE CR1 1095 1378 -199 2362 67 7 0 chr10 32930167 32930466 -112658822 + AluY SINE Alu 1 301 -10 2045 119 0 31 chr10 32930469 32930788 -112658500 + AluSg1 SINE Alu 1 309 0 2132 117 3 0 chr10 32931064 32931373 -112657915 - AluSx SINE Alu -2 310 1 588 275 38 33 chr10 32931914 32932125 -112657163 - L1ME LINE L1 -380 5741 5530 827 165 104 12 chr10 32932157 32932321 -112656967 + FRAM SINE Alu 1 173 -3 265 283 61 0 chr10 32932373 32932472 -112656816 + L1ME4a LINE L1 5804 5908 -213 181 274 78 0 chr10 32932648 32932699 -112656589 - MIR SINE MIR -2 260 206 261 280 160 76 chr10 32933532 32933748 -112655540 + L2 LINE L2 2463 2660 -654 408 290 15 0 chr10 32933748 32933879 -112655409 + MER94 DNA DNA 2 134 0 261 280 160 76 chr10 32933879 32934094 -112655194 + L2 LINE L2 2660 2930 -384 4349 219 33 29 chr10 32934248 32935752 -112653536 + L1MCb LINE L1 3 1517 -4851 206 369 54 13 chr10 32935780 32935929 -112653359 + L2 LINE L2 2640 2794 -520 1545 157 30 50 chr10 32936077 32936211 -112653077 + AluJo SINE Alu 6 141 -171 1360 166 17 83 chr10 32936211 32936549 -112652739 + AluJb SINE Alu 1 318 0 1545 157 30 50 chr10 32936549 32936713 -112652575 + AluJo SINE Alu 141 299 -13 468 246 105 12 chr10 32936842 32937013 -112652275 + LTR37B LTR ERV1 12 198 -270 393 239 18 9 chr10 32937058 32937171 -112652117 + LTR37B LTR ERV1 197 310 -158 245 288 132 47 chr10 32937353 32937418 -112651870 + LTR16B LTR ERVL 34 92 -372 2085 141 15 24 chr10 32937418 32937758 -112651530 + MER1B DNA MER1_type 1 337 0 245 288 132 47 chr10 32937758 32937949 -112651339 + LTR16B LTR ERVL 92 312 -152 24 0 0 0 chr10 32938380 32938404 -112650884 + AT_rich Low_complexity Low_complexity 1 24 0 184 217 29 43 chr10 32940102 32940171 -112649117 + L2 LINE L2 2992 3059 -213 2038 131 45 25 chr10 32940212 32940571 -112648717 - MLT1B LTR MaLR -3 387 22 1748 157 7 3 chr10 32940643 32940930 -112648358 - AluJo SINE Alu -24 288 1 1975 149 0 0 chr10 32941579 32941887 -112647401 - AluJo SINE Alu -4 308 1 1702 159 3 10 chr10 32942677 32942966 -112646322 - AluJb SINE Alu -23 289 3 3362 152 0 36 chr10 32943209 32943757 -112645531 + MER1A DNA MER1_type 1 528 -1 1975 115 0 10 chr10 32943893 32944217 -112645071 - AluY SINE Alu 0 311 1 948 168 0 12 chr10 32944221 32944394 -112644894 - AluJo SINE Alu -18 294 124 823 226 0 0 chr10 32944613 32944768 -112644520 + AluJb SINE Alu 14 168 -144 1782 137 21 3 chr10 32944868 32944981 -112644307 + AluJb SINE Alu 15 125 -187 183 42 0 0 chr10 32944981 32945005 -112644283 + (CA)n Simple_repeat Simple_repeat 2 25 0 1782 137 21 3 chr10 32945005 32945176 -112644112 + AluJb SINE Alu 125 304 -8 1595 172 11 4 chr10 32946715 32946994 -112642294 - AluJo SINE Alu -31 281 1 806 211 92 11 chr10 32947562 32947747 -112641541 - MER20 DNA MER1_type -19 200 1 1546 182 3 26 chr10 32953747 32954054 -112635234 - AluJb SINE Alu -1 311 12 292 127 91 18 chr10 32954054 32954495 -112634793 + MIR3 SINE MIR 121 179 -29 185 222 0 185 chr10 32954064 32954104 -112635184 + L3b LINE CR1 1515 1534 -49 * 2249 119 21 52 chr10 32954104 32954491 -112634797 - THE1C LTR MaLR 0 375 1 185 222 0 185 chr10 32954491 32954531 -112634757 + L3b LINE CR1 1534 1580 -3 1886 144 37 0 chr10 32955187 32955485 -112633803 + AluSx SINE Alu 2 310 -2 1979 146 0 16 chr10 32955508 32955823 -112633465 + AluSx SINE Alu 1 310 -2 405 328 15 30 chr10 32955935 32956069 -112633219 - L2 LINE L2 -2 3311 3180 1819 116 0 57 chr10 32956409 32956710 -112632578 - AluSq SINE Alu -29 284 1 337 314 14 7 chr10 32956918 32957058 -112632230 + LTR67 LTR ERVL 417 557 0 2004 143 3 3 chr10 32957396 32957703 -112631585 - Tigger1 DNA MER2_type -194 2224 1918 475 144 11 0 chr10 32957715 32957805 -112631483 - L1PB2 LINE L1 -3 6148 6058 1947 135 0 19 chr10 32957810 32958128 -112631160 - AluSx SINE Alu 0 312 1 632 203 57 0 chr10 32958435 32958558 -112630730 + MLT1A1 LTR MaLR 3 132 -233 2090 171 79 3 chr10 32958577 32958622 -112630666 - MSTB LTR MaLR -16 410 370 1718 114 0 0 chr10 32958622 32958867 -112630421 + AluSx SINE Alu 55 299 -13 2090 171 79 3 chr10 32958867 32959202 -112630086 - MSTB LTR MaLR -56 370 1 930 214 64 56 chr10 32959202 32959364 -112629924 + MLT1A1 LTR MaLR 134 293 -72 297 0 0 0 chr10 32959364 32959397 -112629891 + (TG)n Simple_repeat Simple_repeat 2 34 0 1826 155 0 3 chr10 32959397 32959688 -112629600 - AluSx SINE Alu -16 296 7 930 214 64 56 chr10 32959688 32959754 -112629534 + MLT1A1 LTR MaLR 292 365 0 1757 168 0 13 chr10 32960402 32960717 -112628571 - AluJb SINE Alu -1 311 1 2068 123 3 0 chr10 32960725 32961026 -112628262 - AluSx SINE Alu -10 302 1 189 107 0 0 chr10 32962100 32962128 -112627160 + (TG)n Simple_repeat Simple_repeat 2 29 0 21 0 0 0 chr10 32962216 32962237 -112627051 + AT_rich Low_complexity Low_complexity 1 21 0 1602 143 10 43 chr10 32964954 32965255 -112624033 + AluJo SINE Alu 1 291 -21 5486 139 103 131 chr10 32965900 32967509 -112621779 - pTR5 LTR ERV1 0 2438 743 801 269 75 5 chr10 32968170 32968382 -112620906 - MLT1H1 LTR MaLR -328 227 1 437 221 28 56 chr10 32968388 32968496 -112620792 + MLT1J LTR MaLR 228 418 -197 275 261 75 30 chr10 32969010 32969144 -112620144 - MLT1A1-int LTR MaLR -833 538 399 1740 158 0 29 chr10 32969268 32969578 -112619710 + AluSx SINE Alu 1 301 -11 271 284 14 0 chr10 32969598 32969672 -112619616 - MLT1A1-int LTR MaLR -1283 88 14 1515 155 12 16 chr10 32970838 32971096 -112618192 - AluSq SINE Alu -56 257 1 1469 189 3 34 chr10 32971854 32972176 -112617112 + AluJo SINE Alu 1 312 0 286 278 35 70 chr10 32972454 32972532 -112616756 - MIR SINE MIR -58 150 76 2029 191 6 3 chr10 32972532 32972893 -112616395 - MLT1A1 LTR MaLR 0 365 4 286 278 35 70 chr10 32972893 32972929 -112616359 - MIR SINE MIR -132 76 40 1721 161 140 42 chr10 32973111 32973497 -112615791 + MSTC LTR MaLR 1 424 -4 463 215 0 21 chr10 32973819 32973963 -112615325 + GA-rich Low_complexity Low_complexity 2 142 0 1289 138 67 4 chr10 32974177 32974445 -112614843 + AluSq SINE Alu 10 294 -19 24 0 0 0 chr10 32974654 32974678 -112614610 + AT_rich Low_complexity Low_complexity 1 24 0 4142 197 103 71 chr10 32974911 32975652 -112613636 - Charlie1a DNA MER1_type -1306 1455 739 2416 69 0 0 chr10 32975652 32975958 -112613330 - AluY SINE Alu -5 306 1 4142 197 103 71 chr10 32975958 32976625 -112612663 - Charlie1a DNA MER1_type -2022 739 2 240 253 13 76 chr10 32976626 32976705 -112612583 - MIR3 SINE MIR -48 160 87 24 0 0 0 chr10 32977013 32977037 -112612251 + AT_rich Low_complexity Low_complexity 1 24 0 185 326 0 0 chr10 32977379 32977425 -112611863 - L2 LINE L2 -105 3167 3122 229 239 184 16 chr10 32977451 32977581 -112611707 + MIR SINE MIR 5 154 -89 454 297 153 36 chr10 32977874 32978123 -112611165 - L2 LINE L2 -1 3312 3035 1667 183 3 13 chr10 32979906 32980218 -112609070 + AluJo SINE Alu 1 309 -3 1691 181 35 44 chr10 32981099 32981437 -112607851 - MER2 DNA MER2_type -10 335 1 3166 146 99 15 chr10 32981988 32982584 -112606704 - MER39B LTR ERV1 -2 651 6 522 278 106 24 chr10 32982759 32982990 -112606298 - MIR SINE MIR -6 256 16 188 309 49 37 chr10 32983028 32983109 -112606179 + MIR SINE MIR 1 82 -180 1671 156 14 3 chr10 32983133 32983421 -112605867 + AluJb SINE Alu 1 291 -21 242 301 48 0 chr10 32983426 32983509 -112605779 + MIR SINE MIR 146 232 -30 218 300 0 0 chr10 32983939 32983999 -112605289 + L2 LINE L2 3244 3303 -10 2145 113 7 0 chr10 32984956 32985256 -112604032 + AluSx SINE Alu 1 302 -10 21 36 0 0 chr10 32985285 32985313 -112603975 + AT_rich Low_complexity Low_complexity 1 28 0 332 318 119 13 chr10 32985428 32985579 -112603709 + MIR SINE MIR 80 246 -16 302 194 15 15 chr10 32986499 32986566 -112602722 - L2 LINE L2 -1 3271 3205 271 267 107 23 chr10 32986747 32986878 -112602410 - L1MC/D LINE L1 -1945 5863 5722 714 281 102 57 chr10 32988054 32988182 -112601106 - L2 LINE L2 -8 3305 3184 2206 62 21 3 chr10 32988182 32988470 -112600818 - AluY SINE Alu -18 293 1 714 281 102 57 chr10 32988470 32988482 -112600806 - L2 LINE L2 -129 3184 3174 195 100 0 0 chr10 32988482 32988512 -112600776 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 1970 125 7 0 chr10 32988513 32988793 -112600495 - AluSx SINE Alu -30 282 1 714 281 102 57 chr10 32988793 32989209 -112600079 - L2 LINE L2 -138 3175 2714 2125 82 33 23 chr10 32990000 32990304 -112598984 + AluSp SINE Alu 1 307 -6 1611 145 7 25 chr10 32990438 32990720 -112598568 - AluSq SINE Alu -36 277 1 1113 247 57 13 chr10 32990793 32991109 -112598179 + MER46C DNA MER2_type 9 338 0 199 318 36 82 chr10 32991733 32991843 -112597445 - L2 LINE L2 -65 3207 3103 1361 211 7 10 chr10 32992588 32992896 -112596392 + AluY SINE Alu 5 311 0 257 310 190 43 chr10 32993669 32994063 -112595225 + L2 LINE L2 2819 3270 -2 758 220 183 53 chr10 32994598 32994818 -112594470 - L2 LINE L2 -2 3311 3121 2510 58 0 3 chr10 32994818 32995129 -112594159 + AluY SINE Alu 1 310 -1 758 220 183 53 chr10 32995129 32995486 -112593802 - L2 LINE L2 -192 3121 2653 742 321 0 20 chr10 32996318 32996623 -112592665 - AluJo SINE Alu 0 312 14 2243 102 0 3 chr10 32997170 32997475 -112591813 - AluSx SINE Alu -8 304 1 1065 158 0 0 chr10 32997620 32997778 -112591510 + FAM SINE Alu 1 158 -17 37 39 0 0 chr10 32997778 32997829 -112591459 + AT_rich Low_complexity Low_complexity 1 51 0 599 39 0 0 chr10 32997829 32997907 -112591381 - L1HS LINE L1 0 6155 6078 380 235 0 59 chr10 32998050 32998152 -112591136 + L2 LINE L2 3174 3269 -3 22 0 0 0 chr10 32998258 32998280 -112591008 + AT_rich Low_complexity Low_complexity 1 22 0 2634 224 40 16 chr10 32998360 32999265 -112590023 + L1ME1 LINE L1 4691 5617 -549 1252 228 56 44 chr10 32999265 32999322 -112589966 - MLT2D LTR ERVL -5 409 354 2407 50 0 33 chr10 32999322 32999623 -112589665 - AluY SINE Alu -20 291 1 1252 228 56 44 chr10 32999623 32999955 -112589333 - MLT2D LTR ERVL -60 354 15 1813 220 34 62 chr10 32999970 33000534 -112588754 + L1ME1 LINE L1 5611 6158 -8 678 85 57 0 chr10 33000981 33001087 -112588201 + L1 LINE L1 4640 4751 -1395 676 251 55 0 chr10 33001140 33001323 -112587965 + L1M2 LINE L1 3413 3605 -2541 * 2865 151 47 23 chr10 33001302 33002292 -112586996 + L1M2 LINE L1 4731 5754 -546 2532 55 6 10 chr10 33002730 33003042 -112586246 - AluY SINE Alu 0 311 1 1335 278 108 11 chr10 33003225 33003783 -112585505 - MLT1L LTR MaLR 0 615 4 233 338 41 28 chr10 33003901 33004046 -112585242 + L2 LINE L2 1776 1922 -1392 3057 228 83 33 chr10 33004071 33005542 -112583746 - L1MEc LINE L1 -2975 3982 2460 1801 260 27 22 chr10 33005636 33006225 -112583063 - L1MEc LINE L1 -4481 2478 1887 1716 193 0 13 chr10 33006246 33006552 -112582736 - AluJb SINE Alu -10 302 1 1568 185 53 45 chr10 33006603 33006959 -112582329 - MSTC LTR MaLR 0 428 70 6228 240 35 45 chr10 33007059 33008542 -112580746 - MSTC-int LTR MaLR -77 1658 192 2146 124 7 0 chr10 33008542 33008841 -112580447 + AluSx SINE Alu 1 301 -11 6228 240 35 45 chr10 33008841 33009031 -112580257 - MSTC-int LTR MaLR -1543 192 2 469 167 217 8 chr10 33009033 33009153 -112580135 - MSTC LTR MaLR 0 428 284 2348 273 29 65 chr10 33009593 33010360 -112578928 - L1MEc LINE L1 -6110 749 11 644 272 19 14 chr10 33010440 33010653 -112578635 - L1MC5 LINE L1 -453 7508 7295 678 266 0 30 chr10 33010675 33010844 -112578444 - MER5A DNA MER1_type -12 177 14 1090 195 48 78 chr10 33010865 33011260 -112578028 - L1MC5 LINE L1 -722 7239 6857 291 244 0 87 chr10 33011297 33011412 -112577876 - L1MC4a LINE L1 -1145 6663 6559 242 293 104 19 chr10 33011663 33011769 -112577519 - L2 LINE L2 -5 3267 3153 1998 200 49 11 chr10 33011982 33012427 -112576861 - MLT2C2 LTR ERVL -2 462 1 235 35 0 0 chr10 33012743 33012772 -112576516 + MLT2C2 LTR ERVL 434 462 -2 917 197 85 64 chr10 33012934 33013324 -112575964 + MER114 LTR ERV 1 398 -250 1461 156 53 113 chr10 33013347 33013744 -112575544 - MLT1A2 LTR MaLR 0 374 2 914 216 0 0 chr10 33013919 33014081 -112575207 - AluJb SINE Alu -14 298 137 2350 214 76 44 chr10 33014366 33014419 -112574869 - MER82 DNA MER2_type -1 652 602 1071 151 40 104 chr10 33014419 33014670 -112574618 + MER46A DNA MER2_type 1 235 -1 2350 214 76 44 chr10 33014670 33015040 -112574248 - MER82 DNA MER2_type -51 602 200 1721 176 64 9 chr10 33015040 33015369 -112573919 - MER7A DNA MER2_type 0 346 2 2350 214 76 44 chr10 33015369 33015574 -112573714 - MER82 DNA MER2_type -453 200 3 1098 195 30 26 chr10 33017185 33017452 -112571836 + L1MD3 LINE L1 7726 7993 -2 25 0 0 0 chr10 33017514 33017539 -112571749 + AT_rich Low_complexity Low_complexity 1 25 0 2180 142 132 5 chr10 33017640 33018020 -112571268 + MSTA LTR MaLR 1 428 0 2442 87 0 0 chr10 33018922 33019233 -112570055 + AluY SINE Alu 1 311 0 371 187 201 45 chr10 33019406 33019430 -112569858 - MIR SINE MIR 0 262 243 2227 94 3 10 chr10 33019430 33019727 -112569561 - AluSg SINE Alu -15 295 1 371 187 201 45 chr10 33019727 33019836 -112569452 - MIR SINE MIR -19 243 108 1623 285 158 26 chr10 33020507 33021248 -112568040 + L2 LINE L2 2075 2913 -401 290 264 94 19 chr10 33021437 33021543 -112567745 + L3 LINE CR1 1258 1371 -206 959 61 46 0 chr10 33021544 33021675 -112567613 + L1P LINE L1 2496 2632 -3514 2527 106 0 0 chr10 33021680 33022037 -112567251 - L1P LINE L1 -1276 4870 4514 1915 136 20 0 chr10 33022037 33022331 -112566957 - Tigger1 DNA MER2_type -967 1451 1152 1221 104 35 0 chr10 33022345 33022518 -112566770 + Tigger1 DNA MER2_type 975 1153 -1265 1020 221 17 81 chr10 33022519 33022882 -112566406 + L1ME2 LINE L1 5833 6334 0 2139 116 3 0 chr10 33023326 33023620 -112565668 - AluSg SINE Alu -15 295 1 559 294 166 27 chr10 33023630 33023998 -112565290 + MLT1J LTR MaLR 44 462 -49 1497 171 50 34 chr10 33024565 33024863 -112564425 - AluJo SINE Alu -9 303 1 214 268 27 18 chr10 33025156 33025268 -112564020 + T-rich Low_complexity Low_complexity 1 113 0 29 28 0 0 chr10 33025302 33025338 -112563950 + AT_rich Low_complexity Low_complexity 1 36 0 25 0 0 0 chr10 33025466 33025491 -112563797 + AT_rich Low_complexity Low_complexity 1 25 0 21 71 0 0 chr10 33025631 33025673 -112563615 + AT_rich Low_complexity Low_complexity 1 42 0 384 332 98 30 chr10 33026435 33026610 -112562678 + MIR3 SINE MIR 3 196 -12 1585 199 31 0 chr10 33026894 33027180 -112562108 - AluJo SINE Alu -17 295 1 185 200 110 50 chr10 33027859 33027959 -112561329 - L2 LINE L2 -8 3305 3200 220 320 144 16 chr10 33027998 33028123 -112561165 - L2 LINE L2 -5 3308 3168 273 29 0 0 chr10 33028391 33028425 -112560863 + (ATG)n Simple_repeat Simple_repeat 2 35 0 2401 84 0 0 chr10 33029109 33029408 -112559880 + AluY SINE Alu 1 299 -12 21 0 0 0 chr10 33029791 33029812 -112559476 + AT_rich Low_complexity Low_complexity 1 21 0 267 327 40 20 chr10 33030089 33030190 -112559098 - MIR SINE MIR 0 262 160 241 236 231 21 chr10 33030851 33031014 -112558274 + MIR SINE MIR 51 262 0 453 36 0 0 chr10 33031217 33031272 -112558016 + (TG)n Simple_repeat Simple_repeat 2 56 0 2436 78 7 0 chr10 33032636 33032943 -112556345 + AluSp SINE Alu 1 309 -4 216 286 0 0 chr10 33034631 33034680 -112554608 + L2 LINE L2 3193 3241 -31 2317 113 0 0 chr10 33034680 33034989 -112554299 - AluY SINE Alu -2 309 1 1676 158 11 0 chr10 33035032 33035298 -112553990 - AluJo SINE Alu -14 298 30 5584 103 55 0 chr10 33035448 33036546 -112552742 - L1PA16 LINE L1 -9 6157 5018 1939 106 31 31 chr10 33037493 33037786 -112551502 - AluSg SINE Alu -17 293 1 2303 99 16 0 chr10 33037960 33038263 -112551025 - AluSq SINE Alu -5 308 1 23 0 0 0 chr10 33038542 33038565 -112550723 + AT_rich Low_complexity Low_complexity 1 23 0 261 330 137 52 chr10 33038977 33039210 -112550078 + L2 LINE L2 2181 2433 -881 412 263 263 7 chr10 33039254 33039391 -112549897 + MER5A DNA MER1_type 18 189 0 203 333 0 0 chr10 33039776 33039836 -112549452 + L2 LINE L2 2695 2754 -560 270 239 277 8 chr10 33042012 33042142 -112547146 + MER20B DNA MER1_type 25 189 -594 767 276 86 0 chr10 33042584 33042794 -112546494 + L2 LINE L2 2550 2777 -537 524 278 199 50 chr10 33042839 33042994 -112546294 - L2 LINE L2 -905 2409 2278 1113 196 5 14 chr10 33042994 33043214 -112546074 + MER20 DNA MER1_type 2 219 0 524 278 199 50 chr10 33043214 33043461 -112545827 - L2 LINE L2 -1036 2278 1947 232 345 97 0 chr10 33043634 33043779 -112545509 - L2 LINE L2 -2222 1092 934 2968 179 54 82 chr10 33043876 33044709 -112544579 + L1MA9 LINE L1 5465 6274 -38 402 209 23 12 chr10 33044838 33044924 -112544364 + MIR SINE MIR 48 134 -128 1357 196 56 116 chr10 33044935 33045016 -112544272 + MLT1D LTR MaLR 1 85 -420 4018 181 79 11 chr10 33045016 33045823 -112543465 + MER21B LTR ERV1 1 862 -1 1357 196 56 116 chr10 33045823 33046213 -112543075 + MLT1D LTR MaLR 85 439 -66 2360 86 0 13 chr10 33046213 33046527 -112542761 - AluSg SINE Alu 0 310 1 1357 196 56 116 chr10 33046527 33046591 -112542697 + MLT1D LTR MaLR 439 505 0 272 301 24 24 chr10 33046608 33046691 -112542597 + MIR SINE MIR 162 244 -18 481 305 21 14 chr10 33046775 33046916 -112542372 + MIR3 SINE MIR 61 202 -6 4560 154 56 11 chr10 33047224 33048150 -112541138 - L1MB7 LINE L1 -9 6175 5209 2310 98 0 10 chr10 33048787 33049092 -112540196 - AluSg SINE Alu -6 304 3 1194 218 4 30 chr10 33049552 33049814 -112539474 + AluJo SINE Alu 1 255 -57 1002 157 46 30 chr10 33049918 33050115 -112539173 + THE1C LTR MaLR 176 375 0 210 376 92 0 chr10 33050615 33050724 -112538564 - L2 LINE L2 -38 3234 3116 329 206 164 34 chr10 33050736 33050882 -112538406 - MER104 DNA Tc2 -13 167 3 1221 168 78 84 chr10 33051028 33051266 -112538022 - MLT1B LTR MaLR -47 343 106 1283 190 40 90 chr10 33051266 33051645 -112537643 - MLT1A1 LTR MaLR -3 362 3 1221 168 78 84 chr10 33051645 33051751 -112537537 - MLT1B LTR MaLR -284 106 1 375 269 69 28 chr10 33051762 33051907 -112537381 + MIR SINE MIR 111 261 -1 1877 152 35 3 chr10 33052095 33052385 -112536903 - AluJo SINE Alu -13 299 1 1593 189 39 0 chr10 33052772 33053052 -112536236 + AluJo SINE Alu 1 291 -21 194 245 0 41 chr10 33053397 33053446 -112535842 - L2 LINE L2 -95 3218 3172 435 205 83 90 chr10 33053978 33054134 -112535154 + MER112 DNA MER1_type 2 156 -104 365 274 244 0 chr10 33054379 33054580 -112534708 + MIR SINE MIR 12 261 -1 2279 90 3 3 chr10 33056071 33056370 -112532918 + AluSc SINE Alu 1 299 -10 33 66 0 0 chr10 33057179 33057240 -112532048 + GC_rich Low_complexity Low_complexity 1 61 0 236 325 81 16 chr10 33058482 33058605 -112530683 + MIR SINE MIR 17 147 -61 262 298 200 12 chr10 33058742 33058997 -112530291 - L2 LINE L2 -61 3252 2950 658 236 128 0 chr10 33059028 33059223 -112530065 - MIR SINE MIR -21 241 22 603 314 182 13 chr10 33059261 33059784 -112529504 - L2 LINE L2 -388 2926 2316 908 256 0 21 chr10 33059815 33060057 -112529231 - MIR SINE MIR -15 247 11 260 219 55 0 chr10 33060061 33060134 -112529154 - L2 LINE L2 -995 2319 2243 250 337 70 0 chr10 33060285 33060371 -112528917 + L2 LINE L2 3154 3245 -27 30 0 0 0 chr10 33061261 33061291 -112527997 + AT_rich Low_complexity Low_complexity 1 30 0 22 35 0 0 chr10 33061859 33061888 -112527400 + AT_rich Low_complexity Low_complexity 1 29 0 7367 49 0 2 chr10 33061888 33063175 -112526113 - L1PA5 LINE L1 -3 6151 4869 24 0 0 0 chr10 33063285 33063309 -112525979 + AT_rich Low_complexity Low_complexity 1 24 0 893 208 0 42 chr10 33063724 33063916 -112525372 + MER20 DNA MER1_type 36 219 0 244 308 0 0 chr10 33063921 33063986 -112525302 + CT-rich Low_complexity Low_complexity 3 67 0 2415 68 0 7 chr10 33064501 33064797 -112524491 - AluY SINE Alu -17 294 1 316 336 50 0 chr10 33064829 33064948 -112524340 - MIR SINE MIR -64 198 74 8651 99 25 31 chr10 33066086 33066581 -112522707 - HSMAR1 DNA Mariner 0 1287 791 2374 110 3 0 chr10 33066581 33066889 -112522399 + AluSx SINE Alu 1 309 -3 8651 99 25 31 chr10 33066889 33067687 -112521601 - HSMAR1 DNA Mariner -496 791 1 22 0 0 0 chr10 33067810 33067832 -112521456 + AT_rich Low_complexity Low_complexity 1 22 0 607 115 0 0 chr10 33068000 33068087 -112521201 + AluJ/FRAM SINE Alu 216 302 -10 33 43 0 0 chr10 33068324 33068371 -112520917 + AT_rich Low_complexity Low_complexity 1 47 0 1195 195 75 95 chr10 33068482 33068928 -112520360 + LTR56 LTR ERV1 2 436 -1 260 235 61 41 chr10 33069163 33069261 -112520027 - L1MC/D LINE L1 -2329 5479 5380 775 175 34 17 chr10 33069288 33069465 -112519823 + MER53 DNA DNA 7 186 -3 337 317 97 20 chr10 33069477 33069827 -112519461 - L1MC/D LINE L1 -789 5357 4981 738 263 30 0 chr10 33069829 33070027 -112519261 - L2 LINE L2 -455 2859 2656 617 308 43 49 chr10 33070027 33070332 -112518956 + MLT1J LTR MaLR 1 303 -208 235 224 29 80 chr10 33070338 33070512 -112518776 + MLT1J1 LTR MaLR 280 396 -13 731 274 137 4 chr10 33071124 33071379 -112517909 - MLT1I LTR MaLR -49 360 72 717 290 70 48 chr10 33072301 33072723 -112516565 + MLT1J LTR MaLR 72 448 -2 23 0 0 0 chr10 33072947 33072970 -112516318 + AT_rich Low_complexity Low_complexity 1 23 0 1201 223 47 36 chr10 33073087 33073388 -112515900 + MLT1A2 LTR MaLR 3 306 -68 2364 103 0 0 chr10 33073480 33073780 -112515508 - AluSx SINE Alu -12 300 1 188 243 0 14 chr10 33073866 33073936 -112515352 + (TAA)n Simple_repeat Simple_repeat 1 69 0 1385 187 55 52 chr10 33073974 33074263 -112515025 + AluJo SINE Alu 1 290 -22 222 37 0 0 chr10 33074263 33074280 -112515008 + (CA)n Simple_repeat Simple_repeat 1 44 0 222 37 0 0 chr10 33074280 33074307 -112514981 + (CA)n Simple_repeat Simple_repeat 2 28 0 587 278 84 0 chr10 33074328 33074519 -112514769 - MIR SINE MIR 0 262 56 1706 186 30 24 chr10 33074546 33074918 -112514370 + MLT1A2 LTR MaLR 1 374 0 248 303 131 51 chr10 33074991 33075463 -112513825 - L2 LINE L2 -1227 2087 1578 2646 20 0 0 chr10 33075811 33076104 -112513184 - AluYa5 SINE Alu -18 293 1 4162 173 94 18 chr10 33078245 33079756 -112509532 - MER52A LTR ERV1 0 1755 66 23 0 0 0 chr10 33081980 33082003 -112507285 + AT_rich Low_complexity Low_complexity 1 23 0 2140 53 43 66 chr10 33083344 33083648 -112505640 - AluY SINE Alu -14 297 1 303 321 100 0 chr10 33084008 33084148 -112505140 + MIR SINE MIR 64 217 -45 2166 114 0 25 chr10 33084329 33084645 -112504643 - AluSg SINE Alu -2 308 1 21 0 0 0 chr10 33084654 33084675 -112504613 + AT_rich Low_complexity Low_complexity 1 21 0 352 284 52 37 chr10 33084894 33085028 -112504260 + L2 LINE L2 3128 3263 -9 21 71 0 0 chr10 33086212 33086254 -112503034 + AT_rich Low_complexity Low_complexity 1 42 0 920 278 85 20 chr10 33086850 33087250 -112502038 + L1MC4a LINE L1 5567 5992 -1816 2024 112 31 3 chr10 33087464 33087758 -112501530 - AluSx SINE Alu -10 302 1 222 343 10 20 chr10 33087775 33087877 -112501411 + MIR SINE MIR 5 105 -157 5060 89 27 0 chr10 33087879 33089142 -112500146 - L1PA13 LINE L1 -3 6160 4834 307 242 75 68 chr10 33089365 33089526 -112499762 + MER112 DNA MER1_type 66 227 -33 2316 94 0 25 chr10 33089942 33090260 -112499028 - AluSx SINE Alu -2 310 1 277 291 56 11 chr10 33097220 33097343 -112491945 + MIR SINE MIR 33 158 -50 208 337 59 10 chr10 33097456 33097557 -112491731 + L2 LINE L2 3147 3252 -20 1657 156 26 4 chr10 33098611 33098902 -112490386 + AluJo SINE Alu 13 309 0 553 213 12 71 chr10 33098973 33099142 -112490146 - MIR SINE MIR -21 241 83 2279 100 0 0 chr10 33099749 33100039 -112489249 - AluSq SINE Alu -17 296 7 305 335 60 32 chr10 33100825 33101043 -112488245 - MLT1K LTR MaLR -113 475 252 2849 122 16 0 chr10 33101485 33101926 -112487362 + L1PB3 LINE L1 5703 6150 -4 412 268 108 0 chr10 33102031 33102188 -112487100 - MER5B DNA MER1_type -4 174 1 181 281 22 45 chr10 33102382 33102471 -112486817 - L2 LINE L2 -181 3091 3005 747 203 0 13 chr10 33102645 33102859 -112486429 - FRAM SINE Alu 0 176 20 255 147 73 0 chr10 33102866 33102934 -112486354 + T-rich Low_complexity Low_complexity 5 77 0 281 285 138 0 chr10 33103006 33103129 -112486159 - MER5B DNA MER1_type -4 174 35 249 337 0 10 chr10 33104254 33104352 -112484936 + C-rich Low_complexity Low_complexity 2 98 0 242 241 13 25 chr10 33104399 33104478 -112484810 + MIR3 SINE MIR 107 184 -24 1887 175 0 13 chr10 33105075 33105389 -112483899 + AluJo SINE Alu 1 310 -2 195 273 80 0 chr10 33107834 33107922 -112481366 - L2 LINE L2 -1004 2310 2216 2247 112 0 10 chr10 33108658 33108962 -112480326 - AluSg1 SINE Alu -8 301 1 280 0 24 24 chr10 33109039 33109080 -112480208 + (TTTTG)n Simple_repeat Simple_repeat 2 42 0 595 221 198 16 chr10 33109141 33109329 -112479959 + MIR SINE MIR 37 262 0 2073 164 43 33 chr10 33109837 33110143 -112479145 + MSTB LTR MaLR 1 314 -112 1866 136 57 14 chr10 33110143 33110423 -112478865 - AluSx SINE Alu -20 292 1 2073 164 43 33 chr10 33110423 33110538 -112478750 + MSTB LTR MaLR 314 426 0 253 167 0 0 chr10 33111363 33111405 -112477883 + 5S rRNA rRNA 1 42 -79 410 285 83 0 chr10 33111505 33111649 -112477639 - MER103 DNA DNA -10 156 1 234 62 0 0 chr10 33111923 33111955 -112477333 + (GA)n Simple_repeat Simple_repeat 1 32 0 374 239 176 0 chr10 33112340 33112492 -112476796 + MER5A DNA MER1_type 4 186 -3 345 197 0 0 chr10 33112863 33112939 -112476349 + (ATG)n Simple_repeat Simple_repeat 1 76 0 251 172 125 16 chr10 33114976 33115040 -112474248 + MIR SINE MIR 92 162 -100 354 335 43 16 chr10 33115160 33115345 -112473943 - MIR SINE MIR -39 223 34 1674 163 14 24 chr10 33116425 33116719 -112472569 - AluJo SINE Alu -21 291 1 2136 148 0 0 chr10 33116956 33117267 -112472021 + AluSx SINE Alu 1 311 -1 1120 164 23 90 chr10 33118525 33118607 -112470681 + L1MA10 LINE L1 6052 6138 -196 1947 141 17 3 chr10 33118607 33118905 -112470383 + AluSx SINE Alu 1 302 -10 1120 164 23 90 chr10 33118905 33119121 -112470167 + L1MA10 LINE L1 6138 6330 -4 380 282 155 0 chr10 33119121 33119295 -112469993 + MER113 DNA MER1_type? 211 411 -110 1867 163 0 27 chr10 33120603 33120904 -112468384 - AluJo SINE Alu -19 293 1 2289 159 35 46 chr10 33122738 33123198 -112466090 - MLT1C LTR MaLR 0 467 13 2542 61 0 0 chr10 33123339 33123633 -112465655 - AluY SINE Alu -17 294 1 1932 141 3 0 chr10 33124016 33124323 -112464965 + AluJb SINE Alu 1 308 0 370 346 63 0 chr10 33124482 33124687 -112464601 - L1ME LINE L1 -385 5736 5519 315 245 20 59 chr10 33124692 33124794 -112464494 - L1ME LINE L1 -825 5321 5224 723 102 0 17 chr10 33124929 33125047 -112464241 + AluSg/x SINE Alu 176 291 -19 2060 199 19 17 chr10 33125047 33125524 -112463764 - L1MB8 LINE L1 -6 6172 5695 406 95 135 0 chr10 33125952 33126026 -112463262 + L1MA3 LINE L1 6178 6261 -44 2302 119 0 0 chr10 33126028 33126331 -112462957 + AluSx SINE Alu 3 305 -7 244 261 72 63 chr10 33126521 33126632 -112462656 + MIR SINE MIR 2 113 -149 1607 166 0 23 chr10 33127771 33128036 -112461252 + AluJo SINE Alu 1 259 -53 368 343 0 4 chr10 33128972 33129114 -112460174 - MERVL LTR ERVL -2226 3259 3144 769 351 20 46 chr10 33129144 33129534 -112459754 - MERVL LTR ERVL -1973 3023 2644 582 300 115 12 chr10 33129571 33129814 -112459474 - MERVL LTR ERVL -3171 2593 2326 903 315 64 30 chr10 33129866 33130304 -112458984 - MERVL LTR ERVL -3478 2176 1724 2214 114 117 16 chr10 33130498 33130874 -112458414 + MSTA LTR MaLR 1 414 -14 2000 135 11 3 chr10 33130874 33131203 -112458085 + AluSq SINE Alu 1 331 0 365 402 4 4 chr10 33131242 33131476 -112457812 - MERVL LTR ERVL -3707 1289 1056 1700 179 0 42 chr10 33131478 33131604 -112457684 + AluJo SINE Alu 1 131 -181 2044 103 21 28 chr10 33131604 33131895 -112457393 - AluSx SINE Alu -21 291 3 1700 179 0 42 chr10 33131895 33132132 -112457156 + AluJo SINE Alu 131 312 0 353 323 70 7 chr10 33132533 33132764 -112456524 - MERVL LTR ERVL -4379 619 410 1745 168 27 3 chr10 33132790 33133126 -112456162 + MER7A DNA MER2_type 1 345 -1 240 362 31 16 chr10 33133443 33133570 -112455718 - LTR16C LTR ERVL -263 228 100 824 270 138 6 chr10 33133936 33134255 -112455033 - L2 LINE L2 0 3313 2953 192 316 23 30 chr10 33134303 33134436 -112454852 - L2 LINE L2 -457 2857 2726 329 24 0 0 chr10 33134457 33134498 -112454790 - MADE1 DNA Mariner 0 80 40 226 75 25 0 chr10 33134511 33134551 -112454737 + HSMAR1 DNA Mariner 1 41 -1246 348 206 0 0 chr10 33135459 33135527 -112453761 - MSTD LTR MaLR 0 396 329 1832 147 36 19 chr10 33135528 33135835 -112453453 + AluJo SINE Alu 1 312 0 2300 99 0 37 chr10 33135922 33136245 -112453043 + AluSq SINE Alu 3 313 0 317 208 0 123 chr10 33136471 33136577 -112452711 + L2 LINE L2 3183 3275 -38 397 256 227 19 chr10 33136612 33136881 -112452407 + L1ME4a LINE L1 5793 6117 -4 631 345 76 26 chr10 33137615 33137997 -112451291 + L3 LINE CR1 1174 1574 -3 477 277 47 107 chr10 33138173 33138602 -112450686 + LTR67 LTR ERVL 67 469 -88 745 275 201 26 chr10 33138617 33138995 -112450293 + MLT1J2 LTR MaLR 7 450 0 1674 203 3 7 chr10 33139421 33139726 -112449562 + AluJo SINE Alu 1 304 -8 990 158 55 0 chr10 33139726 33139891 -112449397 + AluJo/FRAM SINE Alu 135 308 -4 205 289 58 41 chr10 33140702 33140823 -112448465 - MIR3 SINE MIR -42 166 44 25 65 0 0 chr10 33141167 33141213 -112448075 + GC_rich Low_complexity Low_complexity 1 46 0 195 42 0 0 chr10 33141676 33141700 -112447588 + (A)n Simple_repeat Simple_repeat 1 24 0 287 213 62 0 chr10 33144206 33144286 -112445002 + HERVFH21 LTR ERV1 18 102 -6427 680 214 0 53 chr10 33145710 33145897 -112443391 - AluJo SINE Alu -18 294 118 627 198 0 8 chr10 33146038 33146159 -112443129 - FLAM_A SINE Alu -10 123 4 499 274 76 36 chr10 33146461 33146738 -112442550 + L2 LINE L2 2317 2604 -710 596 310 13 8 chr10 33146815 33147054 -112442234 - LTR16B LTR ERVL -2 462 223 194 322 161 21 chr10 33147356 33147499 -112441789 + L2 LINE L2 2898 3060 -212 1723 139 64 39 chr10 33147673 33147811 -112441477 + MSTA LTR MaLR 60 193 -235 1939 143 3 3 chr10 33147811 33148105 -112441183 + AluY SINE Alu 1 294 -17 1723 139 64 39 chr10 33148105 33148325 -112440963 + MSTA LTR MaLR 193 427 -1 1416 115 67 52 chr10 33148326 33148596 -112440692 - Tigger2a DNA MER2_type -160 274 1 2087 135 0 0 chr10 33148660 33148981 -112440307 - AluSx SINE Alu 0 321 1 1871 148 23 0 chr10 33149301 33149605 -112439683 + AluSq SINE Alu 3 313 0 874 122 8 15 chr10 33149849 33149980 -112439308 + FLAM_C SINE Alu 14 143 0 2781 169 9 18 chr10 33150097 33150775 -112438513 + L1MA4A LINE L1 5570 6302 -1 387 254 64 0 chr10 33150777 33150887 -112438401 + MIR SINE MIR 136 252 -10 1980 112 0 31 chr10 33151477 33151764 -112437524 + AluSq SINE Alu 25 302 -11 2196 120 3 0 chr10 33153473 33153765 -112435523 - AluSp SINE Alu -20 293 1 687 150 0 53 chr10 33153772 33153905 -112435383 - L1PB4 LINE L1 -12 6144 6019 1288 119 9 55 chr10 33155732 33155951 -112433337 - MSTB1 LTR MaLR -1 431 223 1151 53 0 0 chr10 33155952 33156084 -112433204 + AluY SINE Alu 1 132 -179 1725 185 7 3 chr10 33156087 33156384 -112432904 + AluJb SINE Alu 1 298 -14 331 233 10 107 chr10 33156384 33156409 -112432879 - MER7A DNA MER2_type -2946 92 66 2156 122 0 7 chr10 33156409 33156704 -112432584 + AluSq SINE Alu 1 293 -20 331 233 10 107 chr10 33156704 33156781 -112432507 - MER7A DNA MER2_type -2972 66 2 199 306 47 112 chr10 33158371 33158541 -112430747 + L2 LINE L2 2600 2758 -556 1166 182 21 0 chr10 33158567 33158754 -112430534 + MER58A DNA MER1_type 34 224 0 1716 88 13 108 chr10 33158791 33159098 -112430190 - AluSx SINE Alu 0 312 35 189 257 150 62 chr10 33159317 33159430 -112429858 + L2 LINE L2 3177 3299 -14 2062 211 82 19 chr10 33159909 33160557 -112428731 + L1M4 LINE L1 2412 3100 -3046 228 331 48 35 chr10 33160653 33160798 -112428490 - L2 LINE L2 -1392 1922 1776 1461 280 109 12 chr10 33160916 33161474 -112427814 + MLT1L LTR MaLR 4 615 0 2242 99 6 10 chr10 33161657 33161969 -112427319 + AluY SINE Alu 1 311 0 1511 201 0 26 chr10 33162227 33162530 -112426758 + AluJo SINE Alu 1 295 -17 369 316 68 63 chr10 33163485 33163675 -112425613 + L2 LINE L2 2924 3114 -158 2623 45 0 7 chr10 33163987 33164295 -112424993 - AluSp SINE Alu -7 306 1 433 236 136 78 chr10 33164356 33164547 -112424741 - Charlie8 DNA MER1_type -2136 281 80 997 198 6 6 chr10 33164548 33164720 -112424568 - Tigger2 DNA MER2_type -11 2707 2536 1158 113 25 39 chr10 33164721 33164925 -112424363 + MSTA LTR MaLR 1 201 -227 1393 163 12 40 chr10 33165033 33165285 -112424003 - AluJo SINE Alu -57 255 11 1586 166 21 25 chr10 33165806 33166160 -112423128 + AluJo SINE Alu 1 353 0 351 314 0 0 chr10 33166193 33166279 -112423009 - L2 LINE L2 -51 3221 3136 2294 104 0 10 chr10 33166292 33166599 -112422689 + AluSx SINE Alu 1 304 -8 464 277 77 8 chr10 33166607 33166737 -112422551 - MER91C DNA MER1_type 0 140 2 219 349 101 0 chr10 33166810 33166919 -112422369 - L2 LINE L2 -198 3074 2955 182 244 22 0 chr10 33167295 33167340 -112421948 + L2 LINE L2 2703 2748 -566 387 0 0 0 chr10 33167496 33167539 -112421749 + (TGGA)n Simple_repeat Simple_repeat 4 46 0 372 335 12 6 chr10 33167789 33167959 -112421329 + L1ME LINE L1 5647 5817 -304 1474 238 99 16 chr10 33167999 33168024 -112421264 - HsTC2 DNA Tc2 -7 1891 1869 1778 142 42 0 chr10 33168024 33168312 -112420976 - AluSx SINE Alu -10 302 3 1474 238 99 16 chr10 33168312 33168850 -112420438 - HsTC2 DNA Tc2 -29 1869 1281 682 128 30 105 chr10 33169148 33169228 -112420060 + AluJo/FLAM SINE Alu 1 69 -243 2265 98 3 3 chr10 33169228 33169525 -112419763 - AluSx SINE Alu -13 299 3 682 128 30 105 chr10 33169525 33169577 -112419711 + AluJo/FLAM SINE Alu 69 123 -189 279 0 0 0 chr10 33169583 33169614 -112419674 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 334 330 110 47 chr10 33170029 33170274 -112419014 + L2 LINE L2 2995 3264 -49 1295 285 58 25 chr10 33170274 33170723 -112418565 - LTR16B LTR ERVL 0 464 1 334 330 110 47 chr10 33170723 33170777 -112418511 + L2 LINE L2 3264 3313 0 1635 171 10 32 chr10 33171272 33171582 -112417706 - AluJo SINE Alu -9 303 1 229 316 25 0 chr10 33172556 33172635 -112416653 + L2 LINE L2 3192 3272 0 219 338 181 31 chr10 33172654 33172947 -112416341 - L3 LINE CR1 -1171 406 70 27 73 0 0 chr10 33173283 33173338 -112415950 + AT_rich Low_complexity Low_complexity 1 55 0 334 325 61 15 chr10 33173376 33173573 -112415715 - LTR50 LTR ERVL -133 662 457 578 240 151 0 chr10 33173677 33173869 -112415419 - LTR50 LTR ERVL -571 224 4 1737 144 0 25 chr10 33173935 33174219 -112415069 - AluJo SINE Alu -32 280 4 430 331 41 14 chr10 33174232 33174522 -112414766 - L1ME LINE L1 -301 5820 5523 2285 90 7 0 chr10 33174554 33174853 -112414435 + AluSg SINE Alu 1 301 -9 50 0 0 0 chr10 33175414 33175464 -112413824 + AT_rich Low_complexity Low_complexity 1 50 0 306 87 20 101 chr10 33175464 33175613 -112413675 + (TTTTTA)n Simple_repeat Simple_repeat 1 137 0 36 0 0 0 chr10 33175613 33175649 -112413639 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr10 33175837 33175858 -112413430 + AT_rich Low_complexity Low_complexity 1 21 0 1517 195 61 10 chr10 33176688 33176985 -112412303 + AluJo SINE Alu 1 312 0 1680 177 4 0 chr10 33177579 33177845 -112411443 - AluSx SINE Alu -45 267 1 585 213 30 41 chr10 33178232 33178401 -112410887 + MIR SINE MIR 79 245 -17 594 209 37 37 chr10 33179623 33179757 -112409531 - MIR SINE MIR -122 140 7 326 225 28 0 chr10 33180832 33180903 -112408385 - MER117 DNA MER1_type -37 160 88 289 257 19 38 chr10 33181169 33181274 -112408014 + MER72 LTR ERV1 377 479 -243 377 162 27 203 chr10 33181319 33181534 -112407754 + LTR45B LTR ERV1 324 514 -11 1722 138 174 22 chr10 33182348 33182390 -112406898 + LTR47A LTR ERVL 37 71 -381 1708 204 0 7 chr10 33182390 33182694 -112406594 - AluJo SINE Alu -10 302 1 1722 138 174 22 chr10 33182694 33183012 -112406276 + LTR47A LTR ERVL 71 452 0 571 135 0 0 chr10 33183236 33183325 -112405963 - L1PB3 LINE L1 0 6154 6066 411 73 0 0 chr10 33183921 33183976 -112405312 + (CA)n Simple_repeat Simple_repeat 2 56 0 282 342 108 0 chr10 33186324 33186435 -112402853 + MIR3 SINE MIR 34 156 -52 295 382 15 8 chr10 33187151 33187282 -112402006 - MER5A DNA MER1_type -37 152 21 617 254 63 26 chr10 33188857 33189046 -112400242 + MIR SINE MIR 27 222 -40 4648 63 2 2 chr10 33189476 33190028 -112399260 - L1PA8 LINE L1 -14 6158 5607 323 96 19 0 chr10 33190702 33190754 -112398534 + (TTCC)n Simple_repeat Simple_repeat 2 54 0 953 147 0 13 chr10 33190804 33190954 -112398334 + FRAM SINE Alu 6 153 -23 2371 106 0 0 chr10 33191268 33191580 -112397708 + AluSx SINE Alu 1 312 0 577 110 0 24 chr10 33191594 33191676 -112397612 - MADE1 DNA Mariner 0 80 1 186 313 0 0 chr10 33191742 33191790 -112397498 - MIR SINE MIR -2 260 213 1557 289 92 4 chr10 33192097 33192598 -112396690 - MLT1H1 LTR MaLR -10 545 1 303 300 71 103 chr10 33192783 33193190 -112396098 - MLT1H1-int LTR MaLR -233 1138 745 246 271 146 10 chr10 33193616 33193712 -112395576 - MLT1H1-int LTR MaLR -830 541 433 2083 119 7 3 chr10 33193733 33194027 -112395261 - AluSg SINE Alu -15 295 1 542 42 0 0 chr10 33194239 33194311 -112394977 - L1PA2 LINE L1 0 6155 6084 516 235 13 13 chr10 33194311 33194460 -112394828 - L1M4 LINE L1 -3726 2420 2272 37760 34 24 2 chr10 33194470 33199852 -112389436 - L1PA2 LINE L1 0 6155 654 5073 49 21 0 chr10 33199851 33200479 -112388809 + L1PA2 LINE L1 4 644 -5502 * 1021 307 18 18 chr10 33200520 33200846 -112388442 - MLT1H1 LTR MaLR 0 555 230 1402 231 60 27 chr10 33200846 33201297 -112387991 + L1MEc LINE L1 1925 2390 -4006 3452 35 0 0 chr10 33201299 33201723 -112387565 - L1PA2 LINE L1 -760 5386 4963 7032 17 9 3 chr10 33201723 33202482 -112386806 + L1PA2 LINE L1 5386 6155 0 1126 225 22 44 chr10 33202497 33202861 -112386427 + L1MEc LINE L1 2341 2696 -3519 567 192 90 4 chr10 33202858 33203092 -112386196 + L1MEc LINE L1 3230 3483 -2732 * 241 287 40 0 chr10 33203177 33203278 -112386010 + L1MEc LINE L1 3474 3578 -2637 315 0 0 0 chr10 33203994 33204029 -112385259 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 239 298 0 0 chr10 33204477 33204534 -112384754 + CT-rich Low_complexity Low_complexity 1 57 0 2015 131 0 0 chr10 33206517 33206829 -112382459 + AluSx SINE Alu 1 312 0 273 338 97 43 chr10 33207312 33207703 -112381585 + L2 LINE L2 2866 3277 -36 198 284 37 73 chr10 33208685 33208794 -112380494 - L2 LINE L2 0 3272 3168 2173 103 0 4 chr10 33208795 33209111 -112380177 + AluSc SINE Alu 1 315 0 2359 88 7 0 chr10 33209313 33209607 -112379681 + AluSq SINE Alu 1 296 -17 377 306 24 18 chr10 33209756 33209926 -112379362 + MER5B DNA MER1_type 4 174 -4 2210 103 3 0 chr10 33211207 33211497 -112377791 - AluSx SINE Alu -21 291 1 240 264 359 0 chr10 33211615 33211774 -112377514 - MIR SINE MIR -10 252 37 1973 132 93 39 chr10 33211881 33211906 -112377382 + MSTB1 LTR MaLR 3 25 -407 2269 136 27 8 chr10 33211906 33212274 -112377014 + THE1C LTR MaLR 1 375 0 1973 132 93 39 chr10 33212274 33212656 -112376632 + MSTB1 LTR MaLR 25 432 0 432 228 89 24 chr10 33212658 33212781 -112376507 + MIR SINE MIR 65 195 -67 2614 64 0 0 chr10 33213713 33214024 -112375264 - AluY SINE Alu 0 311 1 28 0 0 0 chr10 33214243 33214271 -112375017 + AT_rich Low_complexity Low_complexity 1 28 0 863 210 13 0 chr10 33214272 33214429 -112374859 - AluJo SINE Alu -31 281 123 429 276 184 39 chr10 33214506 33214777 -112374511 + Charlie8 DNA MER1_type 118 348 -2069 1944 194 59 11 chr10 33214777 33215221 -112374067 - MLT1C LTR MaLR -1 466 2 429 276 184 39 chr10 33215221 33215242 -112374046 + Charlie8 DNA MER1_type 348 365 -2052 684 236 66 62 chr10 33215242 33215501 -112373787 + MIR SINE MIR 3 262 0 429 276 184 39 chr10 33215501 33215668 -112373620 + Charlie8 DNA MER1_type 365 645 -1772 243 180 20 0 chr10 33215694 33215744 -112373544 + Charlie8 DNA MER1_type 1353 1403 -1014 770 241 101 31 chr10 33216445 33216731 -112372557 - MLT1K LTR MaLR 0 588 283 1546 108 8 38 chr10 33217053 33217293 -112371995 - AluSc SINE Alu 0 309 77 1804 176 98 54 chr10 33217293 33217867 -112371421 + pTR5 LTR ERV1 746 1344 -1094 4684 117 62 47 chr10 33217883 33218693 -112370595 + LTR12 LTR ERV1 5 826 0 533 169 0 0 chr10 33218693 33218776 -112370512 - AluY SINE Alu -228 83 1 284 300 80 20 chr10 33218979 33219179 -112370109 + HAL1 LINE L1 307 518 -1989 22 0 0 0 chr10 33219387 33219409 -112369879 + AT_rich Low_complexity Low_complexity 1 22 0 363 305 68 17 chr10 33220070 33220188 -112369100 - MIR SINE MIR -64 144 21 277 346 0 0 chr10 33220749 33220853 -112368435 - MER94 DNA DNA -30 104 1 2110 116 38 0 chr10 33221208 33221501 -112367787 - AluSg SINE Alu -6 304 1 743 202 55 37 chr10 33221591 33221809 -112367479 - L1ME2 LINE L1 0 6164 5943 469 299 25 70 chr10 33222609 33222923 -112366365 + L1MC/D LINE L1 4078 4377 -1769 1636 196 153 12 chr10 33222939 33223274 -112366014 - L1MD3 LINE L1 -104 7891 7484 2474 152 50 7 chr10 33223274 33223716 -112365572 + LOR1b LTR ERV1 1 461 0 1636 196 153 12 chr10 33223716 33223798 -112365490 - L1MD3 LINE L1 -511 7484 7415 368 241 64 97 chr10 33224165 33224476 -112364812 + L1M4 LINE L1 4744 5044 -1102 324 169 0 0 chr10 33224618 33224683 -112364605 + Charlie2 DNA MER1_type 2667 2731 -131 1873 214 83 13 chr10 33224710 33225028 -112364260 - Charlie2a DNA MER1_type -826 2036 1665 2256 113 0 3 chr10 33225028 33225337 -112363951 - AluSq SINE Alu -5 308 1 1873 214 83 13 chr10 33225337 33225547 -112363741 - Charlie2a DNA MER1_type -1197 1665 1471 1066 254 233 16 chr10 33225605 33226164 -112363124 - Charlie2b DNA MER1_type -2099 683 4 233 235 176 42 chr10 33226325 33226444 -112362844 + HAL1b LINE L1 318 452 -896 27 29 0 0 chr10 33226542 33226576 -112362712 + AT_rich Low_complexity Low_complexity 1 34 0 1224 168 0 0 chr10 33228077 33228279 -112361009 + AluSg/x SINE Alu 109 310 0 2117 219 99 53 chr10 33229389 33230731 -112358557 + L1MC/D LINE L1 4406 5831 -361 440 191 124 67 chr10 33230719 33230897 -112358391 + L1ME2 LINE L1 5967 6154 -10 * 244 152 51 51 chr10 33231118 33231197 -112358091 + L1ME LINE L1 5715 5793 -369 21 36 0 0 chr10 33233041 33233069 -112356219 + AT_rich Low_complexity Low_complexity 1 28 0 1715 189 91 67 chr10 33233256 33233807 -112355481 - L1MD2 LINE L1 -2 6357 5794 620 353 76 32 chr10 33234309 33235094 -112354194 - L2 LINE L2 -154 3118 2295 522 278 40 7 chr10 33235127 33235278 -112354010 - MIR SINE MIR -105 157 2 635 323 137 43 chr10 33235304 33236209 -112353079 - L2 LINE L2 -1027 2287 1298 9343 193 58 37 chr10 33239492 33240616 -112348672 + L1M4 LINE L1 2616 3715 -2463 2043 147 0 0 chr10 33240616 33240915 -112348373 + AluSq SINE Alu 2 300 -13 9343 193 58 37 chr10 33240915 33242740 -112346548 + L1M4 LINE L1 3715 5627 -551 594 346 97 30 chr10 33242826 33243604 -112345684 - L2 LINE L2 -27 3245 2420 7397 110 80 51 chr10 33244536 33246447 -112342841 + pTR5 LTR ERV1 17 2438 0 896 59 0 0 chr10 33246452 33246571 -112342717 + pTR5 LTR ERV1 274 392 -2046 807 289 23 5 chr10 33247175 33247393 -112341895 + MIR SINE MIR 35 256 -6 205 220 102 17 chr10 33247519 33247578 -112341710 - MIR SINE MIR -169 93 30 1066 236 46 0 chr10 33247600 33247884 -112341404 + MER58B DNA MER1_type 45 341 0 221 378 67 0 chr10 33248702 33248792 -112340496 - L2 LINE L2 -44 3228 3133 280 263 30 0 chr10 33249287 33249386 -112339902 + (TA)n Simple_repeat Simple_repeat 1 102 0 23 54 0 0 chr10 33249877 33249914 -112339374 + AT_rich Low_complexity Low_complexity 1 37 0 509 271 30 20 chr10 33250840 33251039 -112338249 - Tigger8 DNA MER2_type -188 478 278 4458 152 26 43 chr10 33251039 33251567 -112337721 - L1MB2 LINE L1 -11 6160 5660 2230 92 20 3 chr10 33251567 33251870 -112337418 - AluY SINE Alu -3 308 1 4458 152 26 43 chr10 33251870 33252424 -112336864 - L1MB2 LINE L1 -511 5660 5098 534 268 89 5 chr10 33252468 33252658 -112336630 - Tigger8 DNA MER2_type -393 273 68 715 291 143 9 chr10 33254750 33255100 -112334188 + L1MC4a LINE L1 5517 5913 -1895 1391 116 116 101 chr10 33255405 33255733 -112333555 + MER44D DNA MER2_type 1 603 -6 22 70 0 0 chr10 33256322 33256365 -112332923 + AT_rich Low_complexity Low_complexity 1 43 0 817 283 122 25 chr10 33256525 33256928 -112332360 + HAL1 LINE L1 1113 1554 -953 658 236 0 12 chr10 33256979 33257144 -112332144 + HAL1 LINE L1 2237 2399 -108 242 297 144 9 chr10 33257229 33257340 -112331948 - L2 LINE L2 -615 2699 2574 264 59 0 0 chr10 33257773 33257807 -112331481 + (T)n Simple_repeat Simple_repeat 1 34 0 291 274 62 62 chr10 33257906 33258052 -112331236 - MIR SINE MIR -50 212 67 1886 126 19 0 chr10 33258186 33258456 -112330832 + AluSx SINE Alu 2 276 -36 201 128 0 51 chr10 33258456 33258495 -112330793 + (GGAGA)n Simple_repeat Simple_repeat 5 41 0 4433 108 9 14 chr10 33258854 33259519 -112329769 + L1PA13 LINE L1 5494 6155 -8 210 37 0 0 chr10 33259519 33259546 -112329742 + (TG)n Simple_repeat Simple_repeat 2 28 0 1291 243 146 30 chr10 33259650 33260123 -112329165 + L1ME1 LINE L1 5543 6070 -96 2286 204 63 25 chr10 33260123 33260203 -112329085 - MER74B LTR ERVL 0 622 546 2153 72 0 56 chr10 33260203 33260509 -112328779 + AluSg SINE Alu 1 289 -21 2286 204 63 25 chr10 33260509 33260987 -112328301 - MER74B LTR ERVL -76 546 43 276 145 174 29 chr10 33260990 33261059 -112328229 + L1ME1 LINE L1 6082 6160 -6 2250 136 14 8 chr10 33261106 33261467 -112327821 + MER47A DNA MER2_type 4 366 0 749 293 48 26 chr10 33261822 33262095 -112327193 - L3 LINE CR1 -163 1414 1136 281 239 252 32 chr10 33262274 33262429 -112326859 + MIR SINE MIR 47 235 -27 23 78 0 0 chr10 33263596 33263647 -112325641 + AT_rich Low_complexity Low_complexity 1 51 0 1271 166 32 108 chr10 33263987 33264301 -112324987 - AluJb SINE Alu -11 291 2 23 48 0 48 chr10 33264338 33264401 -112324887 + AT_rich Low_complexity Low_complexity 1 60 0 422 293 121 39 chr10 33264495 33264826 -112324462 - L1ME LINE L1 -446 5675 5318 1431 260 62 45 chr10 33265018 33265571 -112323717 - L1ME1 LINE L1 -7 6159 5598 * 3897 251 62 29 chr10 33265569 33267358 -112321930 - L1P LINE L1 -743 5403 3519 2398 102 0 0 chr10 33267429 33267742 -112321546 - AluSp SINE Alu 0 313 1 2877 251 91 16 chr10 33267763 33268859 -112320429 - L1MEc LINE L1 -4869 1527 349 759 202 6 23 chr10 33268910 33268966 -112320322 - L1MEc LINE L1 -6191 205 150 2727 180 223 56 chr10 33268966 33269839 -112319449 - LTR28 LTR ERV1 0 1020 2 759 202 6 23 chr10 33269839 33269955 -112319333 - L1MEc LINE L1 -6246 150 36 27 29 0 0 chr10 33269985 33270019 -112319269 + AT_rich Low_complexity Low_complexity 1 34 0 227 250 103 52 chr10 33270162 33270278 -112319010 - L1ME4a LINE L1 -32 6089 5968 29 0 0 0 chr10 33270995 33271024 -112318264 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr10 33271395 33271423 -112317865 + AT_rich Low_complexity Low_complexity 1 28 0 497 302 88 44 chr10 33271754 33271959 -112317329 + MIR SINE MIR 30 243 -19 442 293 102 18 chr10 33272389 33272556 -112316732 + MIR3 SINE MIR 7 187 -21 253 270 16 16 chr10 33272953 33273016 -112316272 - MIR SINE MIR -152 110 48 52 82 0 0 chr10 33273023 33273145 -112316143 + AT_rich Low_complexity Low_complexity 1 122 0 186 103 0 0 chr10 33273316 33273345 -112315943 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 21 0 0 0 chr10 33273366 33273387 -112315901 + AT_rich Low_complexity Low_complexity 1 21 0 1866 163 0 3 chr10 33273441 33273724 -112315564 + AluJo SINE Alu 1 282 -30 441 0 0 0 chr10 33273727 33273776 -112315512 + (TA)n Simple_repeat Simple_repeat 1 49 0 2401 83 0 0 chr10 33275120 33275422 -112313866 - AluY SINE Alu -9 302 1 2008 114 3 88 chr10 33275435 33275777 -112313511 - AluSq SINE Alu 0 313 1 247 248 144 32 chr10 33276897 33277022 -112312266 + MIR SINE MIR 15 153 -109 2862 220 14 24 chr10 33277056 33277714 -112311574 + MER82 DNA MER2_type 3 653 0 2353 99 0 3 chr10 33278486 33278800 -112310488 - AluSq SINE Alu 0 313 1 2305 98 0 3 chr10 33279520 33279817 -112309471 + AluSq SINE Alu 1 296 -17 24 0 0 0 chr10 33280034 33280058 -112309230 + AT_rich Low_complexity Low_complexity 1 24 0 567 167 10 0 chr10 33280291 33280387 -112308901 - Charlie1 DNA MER1_type 0 2761 2665 1259 83 0 0 chr10 33280517 33280686 -112308602 - L1PB1 LINE L1 -202 5949 5781 324 301 111 7 chr10 33280696 33280849 -112308439 - MIR SINE MIR -67 195 27 366 282 55 55 chr10 33280887 33281050 -112308238 - MIR SINE MIR -91 171 9 710 231 119 61 chr10 33282031 33282298 -112306990 + LTR16A1 LTR ERVL 127 416 -41 2284 123 0 0 chr10 33282298 33282608 -112306680 + AluSx SINE Alu 1 310 -2 710 231 119 61 chr10 33282608 33282652 -112306636 + LTR16A1 LTR ERVL 416 456 -1 254 169 31 31 chr10 33282793 33282858 -112306430 - L1ME LINE L1 -575 5587 5523 2270 102 3 0 chr10 33283519 33283824 -112305464 - AluSq SINE Alu -5 308 3 1969 136 4 0 chr10 33284145 33284461 -112304827 + AluSx SINE Alu 1 317 0 1421 122 67 52 chr10 33284525 33284795 -112304493 + Tigger2a DNA MER2_type 1 274 -160 1104 146 96 9 chr10 33284796 33285016 -112304272 - MSTA LTR MaLR -1 427 189 2394 72 0 3 chr10 33285016 33285307 -112303981 - AluSc SINE Alu -16 293 4 602 254 53 74 chr10 33285313 33285415 -112303873 - MIR SINE MIR -11 251 148 2206 125 0 0 chr10 33285415 33285712 -112303576 - AluSg SINE Alu -13 297 1 602 254 53 74 chr10 33285712 33285853 -112303435 - MIR SINE MIR -114 148 13 264 311 10 0 chr10 33285879 33285982 -112303306 - L1MC/D LINE L1 -2036 5772 5669 1670 177 0 27 chr10 33288134 33288428 -112300860 + AluJo SINE Alu 3 288 -24 366 320 16 24 chr10 33288988 33289113 -112300175 - L2 LINE L2 -9 3304 3181 1395 209 39 26 chr10 33289171 33289478 -112299810 - MLT2C1 LTR ERVL -53 344 34 2780 230 30 5 chr10 33289483 33290109 -112299179 + L1MEc LINE L1 263 904 -5492 231 250 125 58 chr10 33290256 33290376 -112298912 - MLT1J LTR MaLR -55 456 329 1601 131 0 0 chr10 33290580 33290802 -112298486 + AluSx SINE Alu 1 222 -90 226 188 125 0 chr10 33290877 33290925 -112298363 - MER5A DNA MER1_type -135 54 1 675 213 0 0 chr10 33290930 33291052 -112298236 + FLAM_C SINE Alu 3 124 -9 249 33 0 0 chr10 33291069 33291099 -112298189 + Alu SINE Alu 260 289 -13 236 77 26 0 chr10 33292042 33292081 -112297207 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 2592 53 0 0 chr10 33293127 33293429 -112295859 - AluY SINE Alu -9 302 1 2363 84 0 3 chr10 33293609 33293905 -112295383 - AluSc SINE Alu -14 295 1 21 0 0 0 chr10 33293979 33294000 -112295288 + AT_rich Low_complexity Low_complexity 1 21 0 10874 139 13 25 chr10 33294957 33296535 -112292753 - L1MA4A LINE L1 -5 6298 4702 2158 132 3 6 chr10 33296535 33296846 -112292442 + AluSq SINE Alu 1 310 -3 10874 139 13 25 chr10 33296846 33297983 -112291305 - L1MA4A LINE L1 -1601 4702 3552 2077 96 0 11 chr10 33297983 33298255 -112291033 - AluSc SINE Alu -40 269 1 10874 139 13 25 chr10 33298255 33298537 -112290751 - L1MA4A LINE L1 -2751 3552 3340 1866 94 3 118 chr10 33298537 33298877 -112290411 - AluSg SINE Alu -9 301 1 10874 139 13 25 chr10 33298877 33298964 -112290324 - L1MA4A LINE L1 -2963 3340 3253 4897 133 16 33 chr10 33299290 33300203 -112289085 - pTR5 LTR ERV1 -797 1641 744 1414 161 18 37 chr10 33300204 33300477 -112288811 + THE1B LTR MaLR 97 364 0 462 138 12 0 chr10 33300970 33301050 -112288238 + L1PA16 LINE L1 6070 6150 -16 1535 167 29 40 chr10 33301067 33301412 -112287876 + AluJo SINE Alu 13 354 0 1854 131 4 0 chr10 33301468 33301736 -112287552 - AluSx SINE Alu -9 303 35 23 0 0 0 chr10 33302210 33302233 -112287055 + AT_rich Low_complexity Low_complexity 1 23 0 609 240 86 27 chr10 33302379 33302627 -112286661 + MLT1I LTR MaLR 72 299 -110 1120 286 70 25 chr10 33302677 33303117 -112286171 - LTR40c LTR ERVL -5 460 1 284 219 114 29 chr10 33303117 33303192 -112286096 + MLT1J2 LTR MaLR 334 417 -33 240 273 86 0 chr10 33303233 33303361 -112285927 - L1 LINE L1 -1828 4318 4180 925 262 81 20 chr10 33303457 33303755 -112285533 + LTR50 LTR ERVL 1 316 -479 1013 208 123 7 chr10 33303799 33304068 -112285220 + LTR50 LTR ERVL 496 795 0 282 259 68 14 chr10 33304148 33304295 -112284993 - L1 LINE L1 -2188 3958 3804 222 287 7 28 chr10 33304344 33304487 -112284801 + (TA)n Simple_repeat Simple_repeat 1 140 0 187 274 20 0 chr10 33304687 33304738 -112284550 + L2 LINE L2 3261 3312 -1 180 0 0 0 chr10 33306222 33306242 -112283046 + (TG)n Simple_repeat Simple_repeat 2 21 0 2346 78 7 26 chr10 33306284 33306593 -112282695 - AluSx SINE Alu -9 303 1 394 241 173 0 chr10 33307489 33307622 -112281666 - MER117 DNA MER1_type -40 157 2 2327 110 0 0 chr10 33308062 33308363 -112280925 + AluSx SINE Alu 1 301 -11 25 0 0 50 chr10 33309526 33309548 -112279740 + AT_rich Low_complexity Low_complexity 1 22 -16 1939 78 0 4 chr10 33309548 33309804 -112279484 + L1PB1 LINE L1 5892 6146 -5 25 0 0 50 chr10 33309804 33309821 -112279467 + AT_rich Low_complexity Low_complexity 22 38 0 194 310 56 14 chr10 33309860 33309931 -112279357 + MER5B DNA MER1_type 103 176 -2 2446 63 23 0 chr10 33311342 33311770 -112277518 - L1P3 LINE L1 -681 5491 5057 584 73 0 0 chr10 33311770 33311850 -112277438 + L1PA8 LINE L1 6091 6172 0 221 205 0 77 chr10 33313795 33313873 -112275415 + MIR SINE MIR 141 212 -50 2183 92 17 20 chr10 33314434 33314726 -112274562 - AluSx SINE Alu -21 291 1 975 214 6 0 chr10 33314770 33314943 -112274345 + MER45A DNA AcHobo 1 174 -4 440 286 126 34 chr10 33315444 33315656 -112273632 - L2 LINE L2 -51 3262 3071 1674 124 75 14 chr10 33315656 33315938 -112273350 + AluJo SINE Alu 1 299 -13 440 286 126 34 chr10 33315938 33316341 -112272947 - L2 LINE L2 -242 3071 2599 1759 170 3 32 chr10 33316622 33316934 -112272354 + AluJo SINE Alu 1 303 -9 1533 186 17 33 chr10 33317503 33317804 -112271484 + AluJo SINE Alu 1 296 -16 2291 89 6 16 chr10 33317938 33318251 -112271037 + AluSg SINE Alu 1 310 0 21 36 0 0 chr10 33319101 33319129 -112270159 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr10 33319161 33319183 -112270105 + AT_rich Low_complexity Low_complexity 1 22 0 41043 33 1 1 chr10 33319183 33324805 -112264483 - L1PA3 LINE L1 -3 6152 533 2222 146 22 36 chr10 33324909 33325372 -112263916 - MSTA LTR MaLR 0 426 6 190 233 0 82 chr10 33325390 33325463 -112263825 - MIR SINE MIR -12 250 184 696 257 23 6 chr10 33325791 33325966 -112263322 - MIR SINE MIR -49 213 36 22 0 0 0 chr10 33326222 33326244 -112263044 + AT_rich Low_complexity Low_complexity 1 22 0 442 275 18 18 chr10 33327846 33328017 -112261271 - L1MEd LINE L1 -5054 1065 895 379 325 45 45 chr10 33328341 33328630 -112260658 - L1MEd LINE L1 -5577 542 254 1492 155 20 82 chr10 33328754 33329057 -112260231 + AluJo SINE Alu 1 284 -28 1814 174 0 13 chr10 33329718 33330028 -112259260 + AluJo SINE Alu 1 306 -6 258 336 27 9 chr10 33330346 33330456 -112258832 + MIR3 SINE MIR 49 160 -48 959 168 24 67 chr10 33330463 33330628 -112258660 + MER58A DNA MER1_type 26 182 -2238 2306 106 0 3 chr10 33330628 33330930 -112258358 + AluSx SINE Alu 1 301 -11 959 168 24 67 chr10 33330930 33330972 -112258316 + MER58A DNA MER1_type 182 224 0 1405 171 86 21 chr10 33332519 33332799 -112256489 - AluJo SINE Alu -14 298 1 1938 158 7 0 chr10 33335668 33335965 -112253323 + AluSx SINE Alu 1 299 -13 220 322 78 9 chr10 33337244 33337359 -112251929 - L2 LINE L2 0 3272 3150 231 244 71 71 chr10 33338953 33339080 -112250208 + Charlie5 DNA MER1_type 2256 2382 -230 1247 259 51 22 chr10 33339321 33339676 -112249612 - LTR16A LTR ERVL -58 392 28 251 356 17 8 chr10 33339804 33339922 -112249366 - HERV16 LTR ERVL -91 4905 4787 * 1889 335 43 39 chr10 33339891 33341080 -112248208 - ERVL LTR ERVL -441 5323 4130 768 256 137 59 chr10 33341127 33341552 -112247736 - ERVL LTR ERVL -1277 3719 3262 602 310 31 0 chr10 33341557 33341815 -112247473 - ERVL LTR ERVL -2211 3553 3288 2380 95 0 0 chr10 33342428 33342722 -112246566 + AluSg SINE Alu 1 294 -16 365 286 41 29 chr10 33342733 33342904 -112246384 - LTR16C LTR ERVL -3 488 316 1649 153 0 4 chr10 33343825 33344080 -112245208 + AluJo SINE Alu 42 295 -17 23 78 0 0 chr10 33344453 33344504 -112244784 + AT_rich Low_complexity Low_complexity 1 51 0 404 267 52 0 chr10 33344537 33344672 -112244616 - MIR SINE MIR -74 188 47 1679 147 0 29 chr10 33344721 33344993 -112244295 - AluSx SINE Alu -16 296 33 295 224 0 0 chr10 33345231 33345289 -112243999 - MER103 DNA DNA -61 105 48 207 162 0 0 chr10 33346056 33346093 -112243195 + GA-rich Low_complexity Low_complexity 4 40 0 27 0 0 0 chr10 33347775 33347802 -112241486 + AT_rich Low_complexity Low_complexity 1 27 0 1722 160 3 33 chr10 33348290 33348497 -112240791 - AluJo SINE Alu -19 293 81 225 0 0 0 chr10 33348497 33348522 -112240766 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1878 129 41 0 chr10 33348522 33348793 -112240495 - AluSg SINE Alu -28 282 1 1722 160 3 33 chr10 33348793 33348884 -112240404 - AluJo SINE Alu -229 83 3 453 255 82 36 chr10 33348941 33349137 -112240151 - L3 LINE CR1 -263 1314 1110 272 272 165 0 chr10 33349384 33349487 -112239801 - MIR SINE MIR -78 184 65 190 171 24 0 chr10 33350555 33350596 -112238692 + L2 LINE L2 3272 3313 0 490 128 0 12 chr10 33350656 33350742 -112238546 + L1MB3 LINE L1 5937 6021 -162 1645 150 66 22 chr10 33350772 33351046 -112238242 - AluJo SINE Alu -26 286 1 856 128 21 21 chr10 33351046 33351187 -112238101 + L1MB3 LINE L1 6005 6145 -38 328 75 0 0 chr10 33351343 33351396 -112237892 + L1MB4 LINE L1 6127 6179 -1 282 292 81 42 chr10 33351397 33351596 -112237692 - L1ME LINE L1 -470 5651 5461 198 71 0 0 chr10 33351596 33351624 -112237664 + (CA)n Simple_repeat Simple_repeat 2 29 0 282 292 81 42 chr10 33351624 33351847 -112237441 - L1ME LINE L1 -660 5461 5213 361 225 210 7 chr10 33352581 33352719 -112236569 + MIR SINE MIR 56 221 -41 193 359 26 13 chr10 33354005 33354083 -112235205 - L2 LINE L2 -20 3252 3174 1937 164 0 6 chr10 33354085 33354397 -112234891 - AluJb SINE Alu -2 310 1 274 273 0 0 chr10 33355424 33355490 -112233798 - L2 LINE L2 0 3313 3248 1785 158 3 18 chr10 33355607 33355892 -112233396 + AluJo SINE Alu 1 281 -31 186 43 0 0 chr10 33355895 33355918 -112233370 + (TAA)n Simple_repeat Simple_repeat 2 24 0 221 313 0 0 chr10 33355950 33356014 -112233274 - MER5B DNA MER1_type -69 109 46 2330 159 36 12 chr10 33356262 33356678 -112232610 + MSTB LTR MaLR 1 426 0 2445 217 86 5 chr10 33357519 33358127 -112231161 - L1MA3 LINE L1 -275 6030 5374 309 109 0 0 chr10 33359547 33359593 -112229695 + (CA)n Simple_repeat Simple_repeat 2 47 0 1809 181 10 3 chr10 33360616 33360915 -112228373 + AluJb SINE Alu 1 301 -11 955 112 0 15 chr10 33360931 33361065 -112228223 + FLAM_C SINE Alu 12 143 0 2968 158 12 21 chr10 33361183 33361858 -112227430 + L1MA4A LINE L1 5570 6299 -4 346 254 64 0 chr10 33361863 33361973 -112227315 + MIR SINE MIR 136 252 -10 2022 101 0 31 chr10 33362563 33362850 -112226438 + AluSq SINE Alu 25 302 -11 2211 120 3 0 chr10 33364559 33364851 -112224437 - AluSp SINE Alu -20 293 1 644 150 0 53 chr10 33364858 33364991 -112224297 - L1PB4 LINE L1 -12 6144 6019 2278 159 28 44 chr10 33366819 33367038 -112222250 - MSTB1 LTR MaLR -2 430 220 2467 71 0 3 chr10 33367038 33367335 -112221953 + AluY SINE Alu 1 296 -15 2278 159 28 44 chr10 33367335 33367549 -112221739 - MSTB1 LTR MaLR -212 220 4 759 197 0 0 chr10 33367960 33368087 -112221201 - MER7A DNA MER2_type -39 297 171 308 297 0 0 chr10 33368270 33368361 -112220927 + LTR58 LTR ERV1 360 450 -229 687 192 56 111 chr10 33368593 33368687 -112220601 - MER7A DNA MER2_type -2852 186 88 1885 174 3 0 chr10 33368687 33368985 -112220303 + AluJb SINE Alu 1 299 -13 687 192 56 111 chr10 33368985 33369010 -112220278 - MER7A DNA MER2_type -2950 88 63 2175 122 0 7 chr10 33369010 33369305 -112219983 + AluSq SINE Alu 1 293 -20 687 192 56 111 chr10 33369305 33369382 -112219906 - MER7A DNA MER2_type -2975 63 2 1163 182 21 0 chr10 33371169 33371356 -112217932 + MER58A DNA MER1_type 34 224 0 1947 76 3 99 chr10 33371396 33371700 -112217588 - AluY SINE Alu -2 309 35 1574 168 22 6 chr10 33372354 33372657 -112216631 - L1MA9 LINE L1 -12 7698 7398 10636 208 52 29 chr10 33372668 33372733 -112216555 - L1MA9 LINE L1 -439 7271 7209 234 0 0 0 chr10 33372733 33372759 -112216529 + (TG)n Simple_repeat Simple_repeat 2 27 0 10636 208 52 29 chr10 33372759 33372774 -112216514 - L1MA9 LINE L1 -501 7209 7196 553 100 10 10 chr10 33372774 33372874 -112216414 + (TCTA)n Simple_repeat Simple_repeat 2 101 0 10636 208 52 29 chr10 33372874 33375915 -112213373 - L1MA9 LINE L1 -514 7196 3163 2074 95 25 77 chr10 33375915 33376242 -112213046 - AluSg SINE Alu 0 310 1 10636 208 52 29 chr10 33376242 33376489 -112212799 - L1MA9 LINE L1 -4547 3163 2923 380 53 0 35 chr10 33376489 33376546 -112212742 - MLT2A1 LTR ERVL 0 453 399 262 87 72 29 chr10 33376561 33376699 -112212589 + (TA)n Simple_repeat Simple_repeat 2 145 0 2902 69 44 5 chr10 33376699 33377088 -112212200 - MLT2A1 LTR ERVL -40 404 1 2366 200 96 29 chr10 33377088 33377929 -112211359 - L1M2 LINE L1 -4312 2856 2006 372 22 0 0 chr10 33377929 33377974 -112211314 + (TG)n Simple_repeat Simple_repeat 2 46 0 2366 200 96 29 chr10 33377974 33378069 -112211219 - L1M2 LINE L1 -5162 2006 1919 470 316 61 77 chr10 33378501 33378944 -112210344 - L1M2 LINE L1 -6727 441 6 1312 210 50 55 chr10 33378944 33379287 -112210001 + MLT1A1 LTR MaLR 25 365 0 364 167 17 0 chr10 33379291 33379351 -112209937 - MLT1E2 LTR MaLR -565 61 1 299 261 56 14 chr10 33379588 33379730 -112209558 - MER69 DNA AcHobo -4 2522 2375 1171 174 5 40 chr10 33379735 33379959 -112209329 + AluJb SINE Alu 88 303 -9 1197 209 52 41 chr10 33379959 33380322 -112208966 - MER69 DNA AcHobo -143 2383 2017 992 245 37 4 chr10 33380375 33380620 -112208668 - MER69 DNA AcHobo -465 761 509 1419 224 87 61 chr10 33380649 33381073 -112208215 - MER69 DNA AcHobo -791 435 1 2141 117 0 37 chr10 33381273 33381598 -112207690 + AluSq SINE Alu 1 313 0 3157 183 8 16 chr10 33381600 33382228 -112207060 + L1MB4 LINE L1 5551 6173 -7 718 179 0 24 chr10 33382360 33382483 -112206805 + FLAM_A SINE Alu 5 124 -9 2362 102 3 13 chr10 33382600 33382915 -112206373 + AluSp SINE Alu 1 312 -1 1479 63 5 44 chr10 33383395 33383432 -112205856 + MER107 DNA MER1_type 1 38 -159 2032 143 47 14 chr10 33383432 33383795 -112205493 - THE1C LTR MaLR 0 375 1 1479 63 5 44 chr10 33383795 33383962 -112205326 + MER107 DNA MER1_type 38 197 0 1164 232 47 56 chr10 33383986 33384368 -112204920 - MLT1J2 LTR MaLR -6 440 53 1039 241 196 6 chr10 33385761 33386093 -112203195 - MLT1L LTR MaLR -73 542 148 536 249 164 24 chr10 33386094 33386259 -112203029 - MER5A DNA MER1_type -1 188 1 22 0 0 0 chr10 33386419 33386441 -112202847 + AT_rich Low_complexity Low_complexity 1 22 0 2987 230 54 68 chr10 33386998 33388182 -112201106 - L1M4 LINE L1 -1022 5124 3957 3549 236 42 28 chr10 33388187 33389165 -112200123 - L1MEc LINE L1 -5142 1254 263 1425 209 39 26 chr10 33389170 33389477 -112199811 + MLT2C1 LTR ERVL 34 344 -53 325 320 16 24 chr10 33389535 33389660 -112199628 + L2 LINE L2 3181 3304 -9 1677 179 0 27 chr10 33390220 33390516 -112198772 - AluJo SINE Alu -24 288 1 283 311 10 0 chr10 33392666 33392769 -112196519 + L1MC/D LINE L1 5669 5772 -2036 538 254 53 74 chr10 33392795 33392936 -112196352 + MIR SINE MIR 13 148 -114 2245 122 0 0 chr10 33392936 33393232 -112196056 + AluSg SINE Alu 1 296 -14 538 254 53 74 chr10 33393232 33393334 -112195954 + MIR SINE MIR 148 251 -11 2290 90 0 0 chr10 33393340 33393646 -112195642 + AluSc SINE Alu 4 309 0 273 57 0 0 chr10 33393902 33393937 -112195351 + (CA)n Simple_repeat Simple_repeat 2 36 0 1398 251 78 10 chr10 33394031 33394414 -112194874 - LTR16A LTR ERVL -13 437 29 2268 120 3 0 chr10 33394484 33394793 -112194495 - AluSx SINE Alu -1 311 2 247 183 108 97 chr10 33395341 33395434 -112193854 + Charlie7 DNA MER1_type 107 200 -2412 1772 167 10 3 chr10 33395590 33395883 -112193405 - AluSx SINE Alu -17 295 1 2112 108 0 17 chr10 33395888 33396185 -112193103 - AluSc SINE Alu -17 292 1 1372 177 16 0 chr10 33396235 33396483 -112192805 + L1MD3 LINE L1 7739 7990 -5 3475 243 109 58 chr10 33396484 33397155 -112192133 + Charlie7 DNA MER1_type 592 1228 -1384 2611 57 0 0 chr10 33397155 33397456 -112191832 + AluY SINE Alu 1 301 -10 3475 243 109 58 chr10 33397456 33398329 -112190959 + Charlie7 DNA MER1_type 1228 2230 -382 1593 148 72 34 chr10 33398329 33398620 -112190668 + AluJb SINE Alu 1 302 -10 3475 243 109 58 chr10 33398620 33398755 -112190533 + Charlie7 DNA MER1_type 2230 2357 -255 21 57 0 0 chr10 33398776 33398811 -112190477 + AT_rich Low_complexity Low_complexity 1 35 0 234 220 0 0 chr10 33398871 33398921 -112190367 + Charlie7 DNA MER1_type 2532 2581 -31 254 294 24 12 chr10 33399135 33399220 -112190068 - MER5A DNA MER1_type -47 142 57 296 323 0 20 chr10 33399232 33399331 -112189957 - MIR SINE MIR -60 148 52 207 0 0 0 chr10 33401628 33401651 -112187637 + (GA)n Simple_repeat Simple_repeat 2 24 0 2776 85 21 94 chr10 33403000 33403481 -112185807 - L1PA11 LINE L1 0 6174 5729 403 203 9 53 chr10 33403819 33403950 -112185338 - L1PA11 LINE L1 -337 5837 5732 530 115 13 0 chr10 33404599 33404677 -112184611 - AluJb SINE Alu -55 257 179 208 180 0 98 chr10 33405831 33405892 -112183396 - L2 LINE L2 -226 3046 2992 482 154 0 0 chr10 33405903 33405981 -112183307 - MSTC LTR MaLR 0 428 351 315 71 0 0 chr10 33405981 33406023 -112183265 + (TTCC)n Simple_repeat Simple_repeat 1 42 0 1810 186 3 3 chr10 33406023 33406319 -112182969 - AluJo SINE Alu -14 298 3 850 117 131 0 chr10 33406321 33406466 -112182822 - MSTC LTR MaLR -63 365 202 336 132 0 0 chr10 33406467 33406520 -112182768 - MSTC LTR MaLR -375 53 1 368 239 263 32 chr10 33407026 33407277 -112182011 + L2 LINE L2 3002 3310 -3 1598 161 15 11 chr10 33407282 33407555 -112181733 + AluJo SINE Alu 25 298 -14 362 262 57 16 chr10 33407678 33407800 -112181488 - MIR SINE MIR -2 260 134 378 297 110 77 chr10 33407976 33408313 -112180975 - L1MC4a LINE L1 -1861 5947 5600 1154 226 133 11 chr10 33408418 33408772 -112180516 + LTR16C LTR ERVL 93 489 -2 2263 68 0 4 chr10 33409035 33409313 -112179975 + AluSc SINE Alu 1 277 -32 309 26 0 0 chr10 33409314 33409352 -112179936 + (CAA)n Simple_repeat Simple_repeat 1 38 0 688 274 102 21 chr10 33409459 33409929 -112179359 - L1MC/D LINE L1 -2034 5774 5267 304 313 116 44 chr10 33409934 33410209 -112179079 - L1MC/D LINE L1 -883 5263 4969 735 152 4 13 chr10 33410280 33410536 -112178752 + AluJo SINE Alu 10 297 -15 968 231 146 0 chr10 33410646 33411020 -112178268 - MER63B DNA MER1_type 0 434 1 2735 133 0 22 chr10 33412227 33412671 -112176617 + Tigger2a DNA MER2_type 1 434 0 3132 277 106 26 chr10 33413309 33413553 -112175735 + L2 LINE L2 593 816 -2498 1744 188 50 72 chr10 33413553 33414069 -112175219 + MLT1D LTR MaLR 1 505 0 3132 277 106 26 chr10 33414069 33415104 -112174184 + L2 LINE L2 816 1975 -1339 938 263 67 43 chr10 33415104 33415662 -112173626 + L2 LINE L2 2597 3164 -149 383 235 49 12 chr10 33415666 33415692 -112173596 + (TA)n Simple_repeat Simple_repeat 1 25 -143 1782 195 14 3 chr10 33415692 33416036 -112173252 + MER7A DNA MER2_type 1 346 0 383 235 49 12 chr10 33416036 33416171 -112173117 + (TA)n Simple_repeat Simple_repeat 25 168 0 424 246 103 32 chr10 33416171 33416297 -112172991 + L2 LINE L2 3178 3312 -1 369 250 174 14 chr10 33417897 33418041 -112171247 + MIR SINE MIR 60 226 -36 2330 123 88 20 chr10 33418109 33418506 -112170782 - MSTB LTR MaLR 0 426 3 2790 130 2 65 chr10 33418794 33419318 -112169970 + L1PB1 LINE L1 5658 6148 -3 180 0 0 0 chr10 33419674 33419694 -112169594 + (A)n Simple_repeat Simple_repeat 1 20 0 1853 180 0 7 chr10 33419732 33420032 -112169256 - AluJo SINE Alu -12 300 3 245 286 31 41 chr10 33420264 33420362 -112168926 + MIR SINE MIR 133 229 -33 364 325 55 6 chr10 33420532 33420695 -112168593 + MIR SINE MIR 69 239 -23 1645 141 0 0 chr10 33420881 33421158 -112168130 + L1PB4 LINE L1 5303 5579 -577 24 32 0 0 chr10 33421218 33421249 -112168039 + AT_rich Low_complexity Low_complexity 1 31 0 2565 186 9 28 chr10 33421280 33421487 -112167801 + L1PB4 LINE L1 5624 5833 -323 2223 109 23 0 chr10 33421487 33421789 -112167499 + AluSc SINE Alu 1 309 0 2565 186 9 28 chr10 33421789 33422120 -112167168 + L1PB4 LINE L1 5833 6152 -4 407 250 89 5 chr10 33424042 33424266 -112165022 + LTR16C LTR ERVL 249 491 0 271 143 191 48 chr10 33424724 33424787 -112164501 - L2 LINE L2 0 3313 3242 2137 173 26 24 chr10 33424964 33425456 -112163832 - L1MA9 LINE L1 -31 6281 5789 1785 98 11 0 chr10 33425487 33425752 -112163536 + L1M2 LINE L1 5479 5746 -566 924 294 150 0 chr10 33425752 33426261 -112163027 - L2 LINE L2 -239 3074 2485 2225 204 51 40 chr10 33426262 33426865 -112162423 - L1MC4 LINE L1 -662 7380 6771 225 296 101 51 chr10 33427440 33427631 -112161657 - MIR SINE MIR -64 144 1 262 238 0 0 chr10 33428802 33428865 -112160423 + Charlie8 DNA MER1_type 2355 2417 0 308 244 47 23 chr10 33431083 33431169 -112158119 + L3 LINE CR1 1434 1521 -56 1927 139 0 20 chr10 33431180 33431481 -112157807 - AluJo SINE Alu -17 295 1 294 206 68 0 chr10 33431517 33431590 -112157698 + MIR SINE MIR 103 180 -82 563 320 87 72 chr10 33433090 33433630 -112155658 + L1MEd LINE L1 2 549 -5570 767 150 8 0 chr10 33433633 33433760 -112155528 + FLAM_C SINE Alu 14 141 -2 400 256 110 42 chr10 33433760 33434191 -112155097 + L1MEd LINE L1 561 1128 -4991 2372 90 0 3 chr10 33434191 33434491 -112154797 + AluSq SINE Alu 1 299 -14 400 256 110 42 chr10 33434491 33434622 -112154666 + L1MEd LINE L1 1128 1249 -4870 282 278 26 26 chr10 33434610 33434761 -112154527 + HAL1 LINE L1 1376 1526 -981 * 887 235 15 15 chr10 33434776 33435036 -112154252 - L1ME3 LINE L1 -192 5970 5711 1935 105 8 0 chr10 33435137 33435403 -112153885 + AluSp SINE Alu 41 308 -5 243 223 155 19 chr10 33436890 33436993 -112152295 - MIR SINE MIR -6 256 140 323 237 111 7 chr10 33436995 33437130 -112152158 - L1ME4a LINE L1 -4 6117 5969 282 242 129 30 chr10 33437168 33437300 -112151988 + L2 LINE L2 3169 3313 0 340 328 39 10 chr10 33437369 33437573 -112151715 - L1ME3 LINE L1 -436 5685 5476 23 0 0 0 chr10 33437608 33437631 -112151657 + AT_rich Low_complexity Low_complexity 1 23 0 324 257 144 81 chr10 33438093 33438315 -112150973 - HAL1 LINE L1 -6 2501 2266 443 276 104 18 chr10 33438864 33439025 -112150263 - L1ME3 LINE L1 -2584 3562 3416 2185 86 0 0 chr10 33439025 33439294 -112149994 - AluSx SINE Alu -16 296 28 443 276 104 18 chr10 33439294 33439458 -112149830 - L1ME3 LINE L1 -2730 3416 3209 2820 260 83 22 chr10 33439466 33439785 -112149503 - L1ME LINE L1 -697 5448 5150 186 103 0 0 chr10 33439785 33439814 -112149474 + (TTTG)n Simple_repeat Simple_repeat 4 32 0 2820 260 83 22 chr10 33439814 33441073 -112148215 - L1ME LINE L1 -995 5150 3780 393 336 152 11 chr10 33441131 33441491 -112147797 - L1ME LINE L1 -4862 1257 821 2238 105 0 0 chr10 33441491 33441787 -112147501 - AluSq SINE Alu -17 296 1 393 336 152 11 chr10 33441787 33441873 -112147415 - L1ME LINE L1 -5298 821 748 215 200 17 17 chr10 33441874 33441934 -112147354 + T-rich Low_complexity Low_complexity 3 62 0 9114 110 2 0 chr10 33441936 33444029 -112145259 - L1PA8A LINE L1 -18 6113 4051 6692 132 18 0 chr10 33444029 33445173 -112144115 + L1PA8A LINE L1 2915 4078 -2068 666 109 10 0 chr10 33445343 33445444 -112143844 - L1MA6 LINE L1 -10 6290 6189 1081 118 6 0 chr10 33445444 33445614 -112143674 + L1MA6 LINE L1 5814 5984 -316 13078 202 65 18 chr10 33445866 33450600 -112138688 + L1MA5 LINE L1 74 5221 -1781 2375 97 0 0 chr10 33450600 33450900 -112138388 + AluSc SINE Alu 1 300 -9 13078 202 65 18 chr10 33450900 33452763 -112136525 + L1MA5 LINE L1 5221 6995 -7 206 206 98 76 chr10 33454185 33454277 -112135011 - MIR SINE MIR -45 217 124 183 211 96 0 chr10 33454335 33454387 -112134901 + MIR SINE MIR 84 140 -122 225 0 0 0 chr10 33455237 33455262 -112134026 + (TC)n Simple_repeat Simple_repeat 1 25 0 * 432 0 0 0 chr10 33455261 33455309 -112133979 + (CA)n Simple_repeat Simple_repeat 1 48 0 617 181 0 0 chr10 33455987 33456114 -112133174 - MER69B DNA AcHobo -2 1224 1098 771 176 0 0 chr10 33456118 33456243 -112133045 + FRAM SINE Alu 22 146 -30 261 0 0 0 chr10 33456245 33456274 -112133014 + (CAA)n Simple_repeat Simple_repeat 2 30 0 1454 204 74 54 chr10 33456274 33456817 -112132471 - MER69B DNA AcHobo -128 1098 478 1131 239 111 17 chr10 33456845 33457142 -112132146 - MER69B DNA AcHobo -901 325 1 2375 83 0 3 chr10 33457983 33458295 -112130993 + AluY SINE Alu 1 311 0 687 181 25 38 chr10 33458307 33458467 -112130821 - L1MB3 LINE L1 -8 6175 6018 3226 146 24 22 chr10 33458478 33459541 -112129747 - L1PA16 LINE L1 -9 6157 4953 2000 189 0 13 chr10 33459540 33459921 -112129367 - L1MB3 LINE L1 -147 6036 5661 * 6001 100 6 1 chr10 33459917 33460766 -112128522 - L1PA13 LINE L1 -1 6162 5310 4128 203 30 10 chr10 33460763 33460959 -112128329 - L1MB3 LINE L1 -509 5674 5484 * 723 100 0 0 chr10 33460959 33461059 -112128229 - L1PA13 LINE L1 -19 6144 6045 4128 203 30 10 chr10 33461059 33462150 -112127138 - L1MB3 LINE L1 -699 5484 4364 * 9421 200 79 27 chr10 33462135 33463011 -112126277 - L1PA4 LINE L1 -663 5492 4663 5233 40 2 0 chr10 33463011 33463636 -112125652 + L1PA4 LINE L1 5519 6150 -5 9421 200 79 27 chr10 33463636 33465577 -112123711 - L1P2 LINE L1 -1492 4663 2526 261 225 85 116 chr10 33465659 33465788 -112123500 + L2 LINE L2 3188 3312 -1 995 301 50 29 chr10 33466135 33467084 -112122204 - L1ME3 LINE L1 -279 5883 4909 1464 290 111 28 chr10 33467145 33468491 -112120797 - L1ME3 LINE L1 -1321 4825 3369 545 228 90 27 chr10 33468532 33468804 -112120484 + L1MA9 LINE L1 5966 6266 -25 327 218 106 94 chr10 33468905 33469095 -112120193 - L1ME3 LINE L1 -2922 3224 3027 2028 97 11 7 chr10 33469095 33469374 -112119914 - AluSg SINE Alu -30 280 1 327 218 106 94 chr10 33469374 33469523 -112119765 - L1ME3 LINE L1 -3119 3027 2881 2361 126 23 0 chr10 33469547 33470011 -112119277 - L1P5 LINE L1 -523 5628 5156 379 262 136 31 chr10 33470081 33470471 -112118817 - L1MEd LINE L1 -865 1625 1096 201 175 0 0 chr10 33470887 33470927 -112118361 + (TA)n Simple_repeat Simple_repeat 1 40 0 563 237 59 0 chr10 33471051 33471186 -112118102 + L2 LINE L2 3168 3310 -3 459 222 0 0 chr10 33471548 33471638 -112117650 + 5S rRNA rRNA 1 90 -31 345 327 56 72 chr10 33471681 33472145 -112117143 + L2 LINE L2 2777 3217 -55 2216 88 13 57 chr10 33472145 33472463 -112116825 - AluSq SINE Alu -9 304 1 345 327 56 72 chr10 33472463 33472515 -112116773 + L2 LINE L2 3217 3268 -4 780 104 16 24 chr10 33472925 33473050 -112116238 - FLAM_C SINE Alu -9 134 11 811 153 16 68 chr10 33476487 33476677 -112112611 + L1MC1 LINE L1 6152 6331 -2 495 300 21 26 chr10 33476808 33476998 -112112290 - MIR SINE MIR -22 240 52 911 221 93 78 chr10 33477023 33477431 -112111857 + MLT1J2 LTR MaLR 14 427 -23 590 216 178 14 chr10 33477634 33477842 -112111446 - L1ME1 LINE L1 -34 6132 5891 411 206 33 0 chr10 33478145 33478237 -112111051 - L1ME1 LINE L1 -271 5895 5801 439 257 136 14 chr10 33478238 33478378 -112110910 + MLT1J LTR MaLR 43 199 -312 488 56 113 0 chr10 33478442 33478513 -112110775 - MADE1 DNA Mariner 0 80 2 201 333 53 35 chr10 33478566 33478680 -112110608 + L2 LINE L2 3194 3309 -4 1695 164 0 17 chr10 33479548 33479835 -112109453 - AluJo SINE Alu -30 282 1 2367 92 0 0 chr10 33481276 33481580 -112107708 - AluSx SINE Alu -8 304 1 1624 176 3 21 chr10 33482042 33482331 -112106957 + AluJo SINE Alu 1 284 -28 311 237 21 32 chr10 33482371 33482464 -112106824 - L1MC4 LINE L1 -1339 6703 6612 319 292 10 0 chr10 33482476 33482572 -112106716 + (CATATA)n Simple_repeat Simple_repeat 2 98 0 2095 121 53 31 chr10 33483630 33483986 -112105302 - THE1B LTR MaLR 0 364 1 622 267 25 8 chr10 33483992 33484220 -112105068 + MIR3 SINE MIR 1 227 -35 448 250 106 8 chr10 33484178 33484310 -112104978 - MIR SINE MIR -5 257 113 * 2032 248 103 57 chr10 33484521 33485627 -112103661 + HAL1 LINE L1 1327 2483 -24 1924 135 3 24 chr10 33485627 33485956 -112103332 + AluSx SINE Alu 1 323 0 1551 176 25 22 chr10 33486915 33487193 -112102095 - AluJo SINE Alu -30 282 4 284 241 155 35 chr10 33487547 33487663 -112101625 - L2 LINE L2 -4 3309 3180 1002 162 50 0 chr10 33488547 33488726 -112100562 - MER5A DNA MER1_type 0 189 2 397 203 152 7 chr10 33488773 33488960 -112100328 + MLT1E1 LTR MaLR 2 263 -391 213 349 83 38 chr10 33489056 33489188 -112100100 - L2 LINE L2 -14 3258 3121 302 352 7 14 chr10 33489394 33489536 -112099752 - L2 LINE L2 -309 2963 2823 2098 148 0 0 chr10 33489733 33490043 -112099245 - AluSx SINE Alu -2 310 1 2287 97 3 0 chr10 33490098 33490396 -112098892 + AluSp SINE Alu 3 301 -12 299 171 0 14 chr10 33491905 33491975 -112097313 + L1ME LINE L1 852 920 -5285 657 284 60 41 chr10 33491996 33492725 -112096563 + L1ME LINE L1 891 1783 -4613 24 32 0 0 chr10 33492725 33492756 -112096532 + AT_rich Low_complexity Low_complexity 1 31 0 768 262 123 53 chr10 33492987 33493503 -112095785 + L1ME LINE L1 2087 2634 -3581 2395 75 0 3 chr10 33493503 33493797 -112095491 - AluY SINE Alu -18 293 1 768 262 123 53 chr10 33493797 33494003 -112095285 + L1ME LINE L1 2634 2824 -3391 556 206 0 78 chr10 33494271 33494412 -112094876 - MER119 DNA MER1_type 0 583 454 472 322 58 0 chr10 33494412 33494533 -112094755 - MER119 DNA MER1_type -449 134 7 347 191 44 0 chr10 33495588 33495656 -112093632 - LTR50 LTR ERVL -4 791 721 1876 184 11 6 chr10 33495662 33496009 -112093279 + MLT1A1 LTR MaLR 1 349 -16 576 138 156 50 chr10 33496007 33496167 -112093121 - LTR50 LTR ERVL -618 177 1 * 24534 30 0 0 chr10 33496259 33499997 -112089291 + L1PA3 LINE L1 2419 6152 -3 557 66 13 0 chr10 33500384 33500460 -112088828 - MADE1 DNA Mariner 0 80 4 506 337 92 26 chr10 33500477 33500892 -112088396 - L2 LINE L2 -743 2571 2130 935 171 27 21 chr10 33501077 33501264 -112088024 + MER5A DNA MER1_type 2 189 0 256 330 28 46 chr10 33501304 33501413 -112087875 - MER5B DNA MER1_type -69 109 3 1729 203 46 3 chr10 33501508 33501857 -112087431 + MLT1A1 LTR MaLR 1 364 -1 2853 226 60 80 chr10 33501900 33502896 -112086392 + L1MCb LINE L1 3 978 -5067 759 280 60 0 chr10 33503081 33503313 -112085975 + MIR SINE MIR 17 262 0 320 275 95 33 chr10 33504117 33504328 -112084960 + L1ME LINE L1 5599 5822 -299 37 62 0 0 chr10 33504328 33504393 -112084895 + AT_rich Low_complexity Low_complexity 1 65 0 7581 26 6 1 chr10 33504676 33505862 -112083426 + L1PA3 LINE L1 4966 6155 0 773 255 16 47 chr10 33506336 33506591 -112082697 - L1ME3A LINE L1 -12 6158 5912 1164 260 50 34 chr10 33506653 33507456 -112081832 - L1ME3A LINE L1 -460 5710 4899 1365 246 117 63 chr10 33507587 33508434 -112080854 - L1ME3A LINE L1 -1444 4702 3810 180 152 0 0 chr10 33508521 33508554 -112080734 + CT-rich Low_complexity Low_complexity 2 34 0 293 314 7 36 chr10 33508554 33508706 -112080582 + (TATATG)n Simple_repeat Simple_repeat 1 147 0 188 200 111 0 chr10 33508695 33508740 -112080548 + L2 LINE L2 3180 3229 -43 * 2732 277 62 29 chr10 33509105 33510099 -112079189 - L2 LINE L2 -379 2935 1909 255 327 58 0 chr10 33510118 33510222 -112079066 - L2 LINE L2 -1669 1645 1536 309 189 35 112 chr10 33510927 33511070 -112078218 - L2 LINE L2 -79 3234 3103 217 242 208 25 chr10 33511473 33511593 -112077695 + MIR SINE MIR 76 217 -45 620 272 13 65 chr10 33512403 33512635 -112076653 + L2 LINE L2 3094 3313 0 5468 140 50 11 chr10 33512975 33514291 -112074997 - L1MA8 LINE L1 -2 6289 4914 354 123 0 0 chr10 33514645 33514702 -112074586 + (TCCC)n Simple_repeat Simple_repeat 1 57 0 255 315 0 0 chr10 33517928 33518001 -112071287 + L1ME LINE L1 5517 5589 -2219 6373 26 0 0 chr10 33518016 33518759 -112070529 - L1PA3 LINE L1 0 6155 5413 6256 31 0 0 chr10 33518759 33519565 -112069723 + L1PA3 LINE L1 4639 5444 -711 257 316 53 16 chr10 33519684 33519874 -112069414 + L1ME LINE L1 5710 5906 -215 1957 145 14 0 chr10 33520362 33520651 -112068637 - AluJb SINE Alu -15 297 5 653 207 7 0 chr10 33520758 33520908 -112068380 - L1MA4 LINE L1 -5 6295 6145 1831 34 9 9 chr10 33521027 33521260 -112068028 - L1PA5 LINE L1 -7 6147 5915 2467 74 6 0 chr10 33521687 33521998 -112067290 + AluSq SINE Alu 1 313 0 2051 128 0 3 chr10 33522535 33522825 -112066463 + AluJb SINE Alu 11 299 -13 1124 160 186 8 chr10 33522932 33523169 -112066119 + L1PA16 LINE L1 5879 6157 -9 349 362 190 29 chr10 33523355 33523719 -112065569 + L2 LINE L2 2826 3256 -16 2094 108 0 4 chr10 33523719 33523997 -112065291 + AluSx SINE Alu 24 300 -12 349 362 190 29 chr10 33523997 33524016 -112065272 + L2 LINE L2 3256 3271 -1 1946 185 28 94 chr10 33524161 33524634 -112064654 + MLT1D LTR MaLR 1 435 -70 1836 154 21 0 chr10 33524634 33524920 -112064368 - AluJb SINE Alu -20 292 1 1946 185 28 94 chr10 33524920 33524987 -112064301 + MLT1D LTR MaLR 435 505 0 779 267 109 26 chr10 33525003 33525351 -112063937 - MLT1J LTR MaLR -10 501 125 1602 201 7 0 chr10 33525373 33525667 -112063621 - AluJo SINE Alu -16 296 1 1409 250 134 16 chr10 33526045 33526493 -112062795 - LTR33 LTR ERVL -2 519 19 318 283 54 11 chr10 33528874 33528966 -112060322 - L2 LINE L2 -4 3309 3214 235 155 96 0 chr10 33529763 33529811 -112059477 - L2 LINE L2 -12 3294 3209 240 213 0 0 chr10 33531090 33531151 -112058137 + G-rich Low_complexity Low_complexity 1 61 0 207 308 25 17 chr10 33531248 33531368 -112057920 + (CGGGG)n Simple_repeat Simple_repeat 2 122 0 39 95 0 0 chr10 33531760 33531876 -112057412 + GC_rich Low_complexity Low_complexity 1 116 0 27 0 0 0 chr10 33532115 33532142 -112057146 + GC_rich Low_complexity Low_complexity 1 27 0 22 0 0 0 chr10 33533220 33533242 -112056046 + AT_rich Low_complexity Low_complexity 1 22 0 202 262 0 16 chr10 33534652 33534713 -112054575 + CT-rich Low_complexity Low_complexity 3 62 0 288 0 0 0 chr10 33535914 33535946 -112053342 + (TG)n Simple_repeat Simple_repeat 2 33 0 21 71 0 0 chr10 33537649 33537691 -112051597 + AT_rich Low_complexity Low_complexity 1 42 0 280 348 128 6 chr10 33538457 33538621 -112050667 - MIR3 SINE MIR -17 191 8 2199 129 0 19 chr10 33539041 33539359 -112049929 - AluSq SINE Alu 0 313 2 491 317 45 45 chr10 33539369 33539969 -112049319 - L1ME1 LINE L1 -284 5882 5285 262 273 8 16 chr10 33540055 33540176 -112049112 - L1ME1 LINE L1 -1052 5094 4975 325 340 156 10 chr10 33540188 33540391 -112048897 + MIR SINE MIR 19 256 -6 23 33 0 0 chr10 33540391 33540421 -112048867 + AT_rich Low_complexity Low_complexity 1 30 0 204 40 0 0 chr10 33540944 33540969 -112048319 + (TG)n Simple_repeat Simple_repeat 1 25 0 3168 189 58 59 chr10 33540975 33542147 -112047141 - L1ME1 LINE L1 -8 6158 4979 2382 84 10 0 chr10 33543027 33543335 -112045953 - AluY SINE Alu 0 311 1 273 374 9 0 chr10 33543343 33543450 -112045838 + MIR3 SINE MIR 50 157 -51 367 364 68 30 chr10 33543596 33543923 -112045365 - L2 LINE L2 -276 3037 2705 24 32 0 0 chr10 33544502 33544533 -112044755 + AT_rich Low_complexity Low_complexity 1 31 0 791 292 153 22 chr10 33545519 33546695 -112042593 + L1MEc LINE L1 2095 3385 -2830 624 150 68 12 chr10 33547051 33547253 -112042035 + Tigger7 DNA MER2_type 3 264 -2223 613 173 0 10 chr10 33547254 33547358 -112041930 + Tigger7 DNA MER2_type 2385 2487 0 1248 270 141 32 chr10 33547366 33548174 -112041114 + L1MEc LINE L1 3832 4727 -1488 276 258 111 93 chr10 33548237 33548516 -112040772 + L1MEc LINE L1 4951 5234 -981 1028 284 76 9 chr10 33548552 33549184 -112040104 + L1MB5 LINE L1 5257 5947 -227 2112 98 13 3 chr10 33549627 33549932 -112039356 - AluSg SINE Alu -2 308 1 838 219 95 19 chr10 33550224 33550434 -112038854 - MIR SINE MIR -32 230 5 2111 98 24 14 chr10 33551437 33551732 -112037556 + AluSg SINE Alu 1 298 -12 1080 322 59 66 chr10 33552518 33553725 -112035563 - L2 LINE L2 -13 3259 2065 218 203 153 0 chr10 33553976 33554035 -112035253 - MIR SINE MIR -28 234 167 376 240 164 0 chr10 33554051 33554155 -112035133 + L2 LINE L2 3191 3311 -2 409 193 92 67 chr10 33554160 33554279 -112035009 - MIR SINE MIR -94 168 47 27 0 0 0 chr10 33555416 33555443 -112033845 + AT_rich Low_complexity Low_complexity 1 27 0 370 286 50 29 chr10 33557875 33558015 -112031273 - MIR3 SINE MIR -8 200 58 728 176 8 0 chr10 33559338 33559457 -112029831 - FLAM_A SINE Alu -12 121 2 262 253 95 86 chr10 33559633 33559654 -112029634 - L1ME LINE L1 -360 5761 5742 24 32 0 0 chr10 33559654 33559685 -112029603 + AT_rich Low_complexity Low_complexity 1 31 0 262 253 95 86 chr10 33559685 33559854 -112029434 - L1ME LINE L1 -379 5742 5539 264 319 26 18 chr10 33559901 33560014 -112029274 + MIR SINE MIR 21 134 -74 2281 114 0 0 chr10 33560231 33560539 -112028749 + AluSx SINE Alu 1 308 -4 5731 156 27 3 chr10 33560762 33562187 -112027101 - L1MA8 LINE L1 -2 6289 4834 21 57 0 0 chr10 33562193 33562228 -112027060 + AT_rich Low_complexity Low_complexity 1 35 0 1502 273 113 9 chr10 33564383 33564922 -112024366 - MLT1G1 LTR MaLR 0 595 1 243 273 125 0 chr10 33565024 33565112 -112024176 + MIR SINE MIR 99 197 -65 570 235 96 32 chr10 33566491 33566678 -112022610 - HsTC2 DNA Tc2 -1076 822 624 333 189 40 0 chr10 33566739 33566813 -112022475 - HsTC2 DNA Tc2 -1599 299 223 194 278 56 56 chr10 33567165 33567237 -112022051 - MIR SINE MIR -112 96 25 441 294 108 94 chr10 33567295 33567966 -112021322 - L2 LINE L2 0 3272 2543 367 312 97 7 chr10 33568770 33568924 -112020364 - Charlie8 DNA MER1_type -2196 221 54 406 297 127 62 chr10 33569688 33570217 -112019071 - MLT1L LTR MaLR -52 563 1 190 354 13 0 chr10 33572198 33572277 -112017011 + MIR SINE MIR 22 101 -161 1623 88 0 0 chr10 33573163 33573368 -112015920 - AluSc SINE Alu -32 277 73 1518 180 47 42 chr10 33573475 33574683 -112014605 - SVA Other Other -518 868 434 548 88 12 0 chr10 33574693 33574773 -112014515 - AluSc SINE Alu -225 84 4 189 297 14 0 chr10 33576661 33576735 -112012553 - MIR SINE MIR -167 95 21 341 250 0 0 chr10 33577332 33577412 -112011876 - L1M1 LINE L1 -3947 3618 3539 22 0 0 0 chr10 33577833 33577855 -112011433 + AT_rich Low_complexity Low_complexity 1 22 0 744 164 0 22 chr10 33578270 33578404 -112010884 - FLAM_C SINE Alu -2 131 1 195 372 122 11 chr10 33578578 33578758 -112010530 + L2 LINE L2 2892 3091 -181 226 284 0 54 chr10 33579272 33579346 -112009942 + MER5A DNA MER1_type 94 163 -26 234 244 0 0 chr10 33579347 33579392 -112009896 + (ATGGTG)n Simple_repeat Simple_repeat 2 46 0 535 259 38 25 chr10 33579405 33579563 -112009725 - MIR SINE MIR -18 244 85 268 214 0 60 chr10 33579903 33579987 -112009301 - L1MC4 LINE L1 -1340 6702 6624 804 149 99 99 chr10 33579989 33580100 -112009188 + MER2 DNA MER2_type 2 116 -229 1787 157 0 7 chr10 33580100 33580402 -112008886 - AluJb SINE Alu 0 304 5 804 149 99 99 chr10 33580402 33580490 -112008798 + MER2 DNA MER2_type 115 202 -143 22 80 0 0 chr10 33580490 33580540 -112008748 + AT_rich Low_complexity Low_complexity 1 50 0 22 35 0 0 chr10 33580660 33580689 -112008599 + AT_rich Low_complexity Low_complexity 1 29 0 5419 167 28 11 chr10 33581039 33582096 -112007192 - L1MA7 LINE L1 -3 6288 5214 602 85 0 0 chr10 33582278 33582360 -112006928 + AluY SINE Alu 1 82 -229 300 274 19 66 chr10 33582699 33582805 -112006483 + MIR SINE MIR 42 142 -66 640 169 8 8 chr10 33582844 33582968 -112006320 - FLAM_C SINE Alu -19 124 1 225 0 0 0 chr10 33585143 33585168 -112004120 + (TG)n Simple_repeat Simple_repeat 2 26 0 21 0 0 0 chr10 33585262 33585283 -112004005 + AT_rich Low_complexity Low_complexity 1 21 0 266 295 53 42 chr10 33586395 33586490 -112002798 - L2 LINE L2 -30 3242 3147 465 19 0 0 chr10 33586993 33587047 -112002241 + (CA)n Simple_repeat Simple_repeat 1 54 0 219 232 196 0 chr10 33587770 33587826 -112001462 + L3 LINE CR1 1356 1422 -155 191 367 0 0 chr10 33588066 33588126 -112001162 - L2 LINE L2 0 3272 3213 780 304 55 0 chr10 33588530 33588747 -112000541 + MIR SINE MIR 12 240 -22 277 136 55 18 chr10 33589960 33590070 -111999218 + (TA)n Simple_repeat Simple_repeat 2 115 0 30 0 0 0 chr10 33590500 33590530 -111998758 + AT_rich Low_complexity Low_complexity 1 30 0 182 79 0 53 chr10 33591362 33591400 -111997888 + (TCTCTG)n Simple_repeat Simple_repeat 6 41 0 216 97 0 0 chr10 33591405 33591436 -111997852 + (TA)n Simple_repeat Simple_repeat 2 32 0 22 35 0 0 chr10 33591473 33591502 -111997786 + AT_rich Low_complexity Low_complexity 1 29 0 546 236 94 112 chr10 33591691 33592318 -111996970 - L1MC5 LINE L1 -49 7912 7297 225 308 120 30 chr10 33592337 33592470 -111996818 - L1MC4 LINE L1 -574 7468 7324 327 307 12 48 chr10 33592500 33592666 -111996622 - L1MC5 LINE L1 -743 7218 7059 320 208 32 80 chr10 33593139 33593264 -111996024 + L1M4 LINE L1 4184 4302 -1844 2145 118 13 0 chr10 33593684 33593990 -111995298 + AluSx SINE Alu 1 310 -2 24 32 0 0 chr10 33595035 33595066 -111994222 + AT_rich Low_complexity Low_complexity 1 31 0 921 205 45 0 chr10 33595142 33595342 -111993946 + MER3 DNA MER1_type 1 209 0 835 249 30 0 chr10 33595559 33595760 -111993528 - MER3 DNA MER1_type -2 207 1 1939 155 0 7 chr10 33595921 33596224 -111993064 - AluSx SINE Alu -5 307 7 225 298 105 18 chr10 33596235 33596349 -111992939 + MER5C DNA MER1_type 1 124 -200 193 255 21 0 chr10 33596483 33596530 -111992758 + MER5C DNA MER1_type 277 324 0 2315 109 0 3 chr10 33597469 33597780 -111991508 - AluSg SINE Alu 0 310 1 25 0 0 0 chr10 33598146 33598171 -111991117 + AT_rich Low_complexity Low_complexity 1 25 0 27 73 0 0 chr10 33598301 33598356 -111990932 + AT_rich Low_complexity Low_complexity 1 55 0 367 246 9 61 chr10 33598454 33598568 -111990720 - L2 LINE L2 -19 3294 3187 21 0 0 0 chr10 33598591 33598612 -111990676 + AT_rich Low_complexity Low_complexity 1 21 0 1241 168 102 0 chr10 33601638 33601912 -111987376 - MER33 DNA MER1_type -22 302 1 710 183 30 71 chr10 33601994 33602191 -111987097 + MER53 DNA DNA 1 189 0 414 0 0 0 chr10 33603186 33603232 -111986056 + (TG)n Simple_repeat Simple_repeat 1 46 0 245 181 24 24 chr10 33604723 33604792 -111984496 + (TA)n Simple_repeat Simple_repeat 2 73 -11 1817 156 0 13 chr10 33604792 33605093 -111984195 - AluJb SINE Alu -15 297 1 245 181 24 24 chr10 33605093 33605106 -111984182 + (TA)n Simple_repeat Simple_repeat 72 84 0 200 209 93 0 chr10 33605950 33605993 -111983295 - L2 LINE L2 -62 3210 3164 919 250 98 40 chr10 33606337 33606713 -111982575 - L1ME3A LINE L1 0 6170 5773 286 323 129 8 chr10 33606746 33606994 -111982294 - L2 LINE L2 -660 2654 2377 1006 92 14 0 chr10 33608958 33609100 -111980188 - AluSg/x SINE Alu 0 309 166 227 108 0 27 chr10 33609110 33609189 -111980099 - L1PA8 LINE L1 0 6172 6123 738 182 29 115 chr10 33609562 33609771 -111979517 + MER58C DNA MER1_type 1 191 -24 23 0 0 0 chr10 33610275 33610298 -111978990 + AT_rich Low_complexity Low_complexity 1 23 0 2625 255 148 42 chr10 33610390 33610946 -111978342 + L2 LINE L2 1602 2098 -1215 2080 122 0 13 chr10 33610946 33611249 -111978039 - AluSx SINE Alu -13 299 1 2625 255 148 42 chr10 33611249 33612238 -111977050 + L2 LINE L2 2098 3313 0 231 152 22 0 chr10 33612601 33612647 -111976641 - L1MD3 LINE L1 -22 7973 7927 22 0 0 0 chr10 33612755 33612777 -111976511 + AT_rich Low_complexity Low_complexity 1 22 0 278 301 38 21 chr10 33612912 33613098 -111976190 - L1ME LINE L1 -302 5819 5631 21 0 0 0 chr10 33613822 33613843 -111975445 + AT_rich Low_complexity Low_complexity 1 21 0 402 21 0 0 chr10 33614046 33614093 -111975195 + (TTG)n Simple_repeat Simple_repeat 2 48 0 394 301 35 18 chr10 33614468 33614581 -111974707 + MIR3 SINE MIR 73 187 -21 437 320 50 58 chr10 33615011 33615247 -111974041 + MIR SINE MIR 7 236 -26 724 219 129 0 chr10 33616866 33617021 -111972267 + MER45A DNA AcHobo 4 178 0 6819 50 8 11 chr10 33617664 33619019 -111970269 - L1PA7 LINE L1 -1 6153 4784 189 0 0 0 chr10 33619038 33619059 -111970229 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 4613 19 0 0 chr10 33619059 33619588 -111969700 - L1PA3 LINE L1 -10 6145 5617 12967 21 0 0 chr10 33619588 33621321 -111967967 + L1PA3 LINE L1 3880 5612 -543 12090 91 14 1 chr10 33621320 33623039 -111966249 - L1PA7 LINE L1 -1344 4802 3062 * 2144 100 11 48 chr10 33623039 33623318 -111965970 + L1P LINE L1 2706 2969 -3177 2672 14 0 3 chr10 33623318 33623612 -111965676 + AluYb8 SINE Alu 15 307 -11 2144 100 11 48 chr10 33623612 33623703 -111965585 + L1P LINE L1 2969 3062 -3084 3199 57 2 0 chr10 33624219 33624621 -111964667 - L1PA5 LINE L1 -3 6151 5749 434 296 78 0 chr10 33626041 33626183 -111963105 + MIR SINE MIR 83 235 -27 231 250 0 0 chr10 33627264 33627312 -111961976 + (CTG)n Simple_repeat Simple_repeat 2 49 0 30 0 0 0 chr10 33627470 33627500 -111961788 + AT_rich Low_complexity Low_complexity 1 30 0 371 370 95 38 chr10 33629745 33630007 -111959281 - L2 LINE L2 -1 3271 2995 1189 139 102 5 chr10 33630757 33630972 -111958316 + MER46A DNA MER2_type 1 236 0 264 232 0 0 chr10 33630998 33631054 -111958234 - L2 LINE L2 -76 3237 3182 348 316 51 63 chr10 33631251 33631488 -111957800 - L2 LINE L2 -462 2852 2619 330 276 126 24 chr10 33631720 33631847 -111957441 - L2 LINE L2 0 3272 3133 2166 189 138 22 chr10 33632149 33632735 -111956553 - MLT1E1 LTR MaLR 0 654 1 301 348 163 0 chr10 33633723 33633858 -111955430 + L2 LINE L2 3116 3272 0 2182 163 11 3 chr10 33634629 33634998 -111954290 - L1PA16 LINE L1 -11 6155 5784 246 105 0 0 chr10 33634998 33635036 -111954252 + (TA)n Simple_repeat Simple_repeat 1 38 0 181 98 49 0 chr10 33635954 33635995 -111953293 + T-rich Low_complexity Low_complexity 4 46 0 244 316 69 46 chr10 33637946 33638120 -111951168 + MIR SINE MIR 7 184 -78 272 315 14 0 chr10 33639143 33639216 -111950072 + MIR SINE MIR 5 78 -184 2448 50 0 23 chr10 33639526 33639828 -111949460 + AluY SINE Alu 1 295 -16 7417 183 28 13 chr10 33639837 33641366 -111947922 - L1PBa LINE L1 -2799 4063 2451 1835 88 78 3 chr10 33641366 33641650 -111947638 + L1PA13 LINE L1 5859 6163 0 7417 183 28 13 chr10 33641650 33641683 -111947605 - L1PBa LINE L1 -4411 2451 2420 2437 84 10 0 chr10 33641689 33641997 -111947291 - AluSq SINE Alu -2 311 1 224 247 111 0 chr10 33642275 33642356 -111946932 - MIR SINE MIR -49 213 124 281 29 0 200 chr10 33643268 33643338 -111945950 - U2 snRNA snRNA -132 56 1 23 33 0 0 chr10 33643475 33643505 -111945783 + AT_rich Low_complexity Low_complexity 1 30 0 646 164 75 25 chr10 33644104 33644263 -111945025 + MER3 DNA MER1_type 1 167 -42 1836 160 0 7 chr10 33644268 33644549 -111944739 + AluJb SINE Alu 6 284 -28 5563 189 99 9 chr10 33644610 33645888 -111943400 - Charlie1a DNA MER1_type -3 1452 61 298 250 54 22 chr10 33646192 33646284 -111943004 - MIR SINE MIR -16 246 152 242 326 92 0 chr10 33646294 33646392 -111942896 + MIR3 SINE MIR 49 155 -53 671 318 181 12 chr10 33646792 33646914 -111942374 - L2 LINE L2 -1 3312 3212 1818 206 101 15 chr10 33646914 33647379 -111941909 + MLT1D LTR MaLR 1 505 0 671 318 181 12 chr10 33647379 33647903 -111941385 - L2 LINE L2 -101 3212 2551 588 276 71 20 chr10 33648416 33648612 -111940676 + MIR SINE MIR 6 211 -51 1500 184 7 31 chr10 33650511 33650805 -111938483 + AluJo SINE Alu 1 287 -25 270 164 0 0 chr10 33650806 33650861 -111938427 + (CATA)n Simple_repeat Simple_repeat 2 56 0 34 55 0 0 chr10 33650957 33651012 -111938276 + AT_rich Low_complexity Low_complexity 1 55 0 587 289 114 0 chr10 33651466 33651694 -111937594 - L2 LINE L2 -43 3270 3017 2188 238 243 23 chr10 33651727 33652247 -111937041 - L2 LINE L2 -417 2897 2493 12196 44 4 10 chr10 33652247 33654532 -111934756 + L1PA5 LINE L1 3874 6154 0 2188 238 243 23 chr10 33654532 33654966 -111934322 - L2 LINE L2 -821 2493 1733 225 258 45 34 chr10 33654966 33655055 -111934233 - L2 LINE L2 -2185 1129 1040 326 254 164 5 chr10 33655090 33655279 -111934009 - L1M4 LINE L1 -743 5403 5185 42689 34 22 1 chr10 33655369 33661394 -111927894 - L1PA2 LINE L1 -1 6154 3 381 288 207 26 chr10 33661396 33661667 -111927621 - L1M4 LINE L1 -1092 5054 4735 730 290 47 20 chr10 33661764 33662019 -111927269 - MIR SINE MIR 0 262 1 382 277 76 63 chr10 33662060 33662587 -111926701 - L1M4 LINE L1 -1533 4613 4080 22 0 0 0 chr10 33662777 33662799 -111926489 + AT_rich Low_complexity Low_complexity 1 22 0 318 132 0 0 chr10 33662830 33662883 -111926405 + (TG)n Simple_repeat Simple_repeat 1 53 0 22 35 0 0 chr10 33664036 33664065 -111925223 + AT_rich Low_complexity Low_complexity 1 29 0 23 54 0 0 chr10 33664190 33664227 -111925061 + AT_rich Low_complexity Low_complexity 1 37 0 183 276 52 17 chr10 33664586 33664644 -111924644 - L2 LINE L2 -4 3309 3250 414 0 0 0 chr10 33664658 33664704 -111924584 + (TG)n Simple_repeat Simple_repeat 1 46 0 306 0 0 0 chr10 33664703 33664737 -111924551 + (GA)n Simple_repeat Simple_repeat 1 34 0 * 14275 86 15 1 chr10 33665594 33668369 -111920919 + L1PA7 LINE L1 3366 6149 -5 459 293 103 17 chr10 33668574 33668748 -111920540 + MIR SINE MIR 10 198 -64 344 265 10 0 chr10 33668760 33668858 -111920430 - MIR SINE MIR -10 252 154 417 20 0 0 chr10 33670273 33670323 -111918965 + (TG)n Simple_repeat Simple_repeat 2 51 0 260 337 133 16 chr10 33670587 33670842 -111918446 + L1MC/D LINE L1 5555 5839 -1969 1569 155 155 25 chr10 33670845 33671168 -111918120 - MER47A DNA MER2_type -1 365 1 432 0 0 0 chr10 33671788 33671836 -111917452 + (TG)n Simple_repeat Simple_repeat 2 49 0 659 224 72 91 chr10 33672539 33672803 -111916485 + MIR SINE MIR 4 262 0 228 264 264 19 chr10 33673674 33673833 -111915455 + MIR3 SINE MIR 5 202 -6 215 209 23 0 chr10 33674213 33674256 -111915032 - MIR3 SINE MIR -31 177 134 21 0 0 0 chr10 33674702 33674723 -111914565 + AT_rich Low_complexity Low_complexity 1 21 0 226 250 94 16 chr10 33674938 33675002 -111914286 - MIR SINE MIR -80 128 60 529 311 137 25 chr10 33675620 33676174 -111913114 + L1MEd LINE L1 461 1076 -5043 1197 84 0 0 chr10 33676174 33676328 -111912960 + AluY SINE Alu 150 303 -8 1582 248 82 52 chr10 33676329 33677560 -111911728 + L1MEd LINE L1 1067 2166 -3965 868 234 5 49 chr10 33677586 33677791 -111911497 - AluJo SINE Alu -30 282 87 4164 217 44 5 chr10 33677806 33678864 -111910424 + L1MEd LINE L1 2188 3287 -2842 726 321 229 19 chr10 33678862 33679652 -111909636 + L1M2 LINE L1 1 956 -5893 * 503 286 70 109 chr10 33679954 33680384 -111908904 + L1PB4 LINE L1 722 1134 -5715 1790 235 91 23 chr10 33680384 33681168 -111908120 + L1PB4 LINE L1 1335 2128 -4720 * 42518 34 22 1 chr10 33681164 33687177 -111902111 + L1PA3 LINE L1 13 6155 0 3570 220 29 4 chr10 33687185 33688052 -111901236 + L1PB4 LINE L1 2110 2995 -3853 * 8617 194 49 17 chr10 33688037 33690991 -111898297 + L1PB4 LINE L1 3811 6858 0 2096 231 31 36 chr10 33691002 33691582 -111897706 + L1 LINE L1 3997 4573 -2275 21 0 0 0 chr10 33691789 33691810 -111897478 + AT_rich Low_complexity Low_complexity 1 21 0 196 338 0 14 chr10 33692443 33692514 -111896774 + MIR3 SINE MIR 101 170 -38 809 201 143 52 chr10 33692697 33693005 -111896283 - L1MC4a LINE L1 -1417 6391 6056 3200 214 45 99 chr10 33693006 33693459 -111895829 + L1MC4a LINE L1 6344 6820 -988 276 190 121 0 chr10 33693459 33693517 -111895771 + AluYb8 SINE Alu 118 182 -126 698 121 0 0 chr10 33693518 33693617 -111895671 + FLAM_A SINE Alu 23 121 -21 3200 214 45 99 chr10 33693617 33694631 -111894657 + L1MC4a LINE L1 6819 7801 -7 586 290 70 9 chr10 33695157 33695371 -111893917 - MIR SINE MIR -16 246 20 1236 193 67 130 chr10 33695721 33696260 -111893028 - MLT1D LTR MaLR 0 505 1 549 304 83 21 chr10 33696303 33696543 -111892745 - MIR SINE MIR -2 260 6 211 332 97 40 chr10 33697176 33697402 -111891886 - MIR SINE MIR -11 251 13 2873 228 102 37 chr10 33697749 33698532 -111890756 - L1MD2 LINE L1 -245 6374 5643 553 65 0 0 chr10 33698532 33698609 -111890679 - L1PA5 LINE L1 0 6154 6078 2873 228 102 37 chr10 33698609 33701734 -111887554 - L1MD2 LINE L1 -976 5643 2083 2241 249 78 34 chr10 33701758 33702919 -111886369 - L1MD2 LINE L1 -4473 1933 775 312 291 86 26 chr10 33703539 33703656 -111885632 - L1MD2 LINE L1 -5879 517 394 224 367 30 35 chr10 33704006 33704127 -111885161 - L2 LINE L2 -219 3053 2932 1788 188 40 3 chr10 33704127 33704478 -111884810 + MER47A DNA MER2_type 2 365 -1 224 367 30 35 chr10 33704478 33704525 -111884763 - L2 LINE L2 -340 2932 2886 2013 164 100 0 chr10 33704868 33705277 -111884011 - L1MD1 LINE L1 0 6242 5793 226 207 73 37 chr10 33706202 33706284 -111883004 - MER41A LTR ERV1 -263 291 207 455 290 210 11 chr10 33707028 33707214 -111882074 + MIR SINE MIR 14 236 -26 917 130 0 25 chr10 33707540 33707702 -111881586 - L1MA4 LINE L1 0 6300 6143 528 45 0 0 chr10 33709867 33709934 -111879354 + (TAGA)n Simple_repeat Simple_repeat 3 69 0 379 229 46 28 chr10 33710431 33710540 -111878748 - MIR SINE MIR -3 259 149 544 247 186 0 chr10 33710558 33710821 -111878467 - Charlie2a DNA MER1_type -48 2814 2503 1686 207 156 38 chr10 33710861 33711528 -111877760 - Charlie2a DNA MER1_type -669 2193 1448 1322 112 0 0 chr10 33711563 33711741 -111877547 + AluSp SINE Alu 122 299 -14 230 178 55 41 chr10 33711775 33711848 -111877440 - Charlie2a DNA MER1_type -1437 1425 1352 1278 247 136 26 chr10 33711960 33712849 -111876439 - Charlie2a DNA MER1_type -1801 1061 1 1408 162 74 29 chr10 33713585 33713894 -111875394 - MER44D DNA MER2_type -7 602 10 206 147 29 0 chr10 33714686 33714720 -111874568 + MIR SINE MIR 197 231 -31 15142 164 58 31 chr10 33715369 33721527 -111867761 - L1MA4A LINE L1 -477 6528 3 416 192 2 110 chr10 33721982 33722136 -111867152 - MLT1J1 LTR MaLR -258 192 54 522 302 98 38 chr10 33722352 33722588 -111866700 + MIR SINE MIR 10 258 -4 21 0 0 0 chr10 33723580 33723601 -111865687 + AT_rich Low_complexity Low_complexity 1 21 0 1840 272 172 13 chr10 33724546 33725506 -111863782 - L2 LINE L2 0 3313 2197 196 346 60 55 chr10 33725828 33726010 -111863278 - L2 LINE L2 -524 2790 2608 192 269 0 45 chr10 33727749 33727816 -111861472 + L3 LINE CR1 595 658 -919 186 296 74 0 chr10 33727984 33728038 -111861250 + L3 LINE CR1 665 722 -855 313 259 223 0 chr10 33728129 33728241 -111861047 + L3 LINE CR1 916 1052 -525 270 0 0 0 chr10 33728502 33728532 -111860756 + (A)n Simple_repeat Simple_repeat 1 30 0 509 218 27 0 chr10 33728842 33728952 -111860336 + MER5C DNA MER1_type 5 117 -207 405 144 10 87 chr10 33728964 33729068 -111860220 + MER5C DNA MER1_type 228 323 -1 929 253 24 20 chr10 33729717 33729966 -111859322 - MIR SINE MIR 0 262 13 790 297 39 4 chr10 33730147 33730403 -111858885 + L3 LINE CR1 1063 1327 -250 298 274 237 7 chr10 33730502 33730637 -111858651 - MIR SINE MIR -48 214 49 405 346 65 7 chr10 33730680 33730833 -111858455 + L3 LINE CR1 1413 1574 -3 318 304 61 17 chr10 33731038 33731153 -111858135 - L2 LINE L2 0 3272 3153 1765 148 32 29 chr10 33736152 33736462 -111852826 - AluJb SINE Alu -1 311 1 188 194 0 0 chr10 33736642 33736678 -111852610 + L3 LINE CR1 974 1009 -568 217 301 0 72 chr10 33736706 33736789 -111852499 + L3 LINE CR1 1325 1401 -176 284 196 54 0 chr10 33736830 33736886 -111852402 + L3 LINE CR1 1516 1574 -3 1191 192 68 59 chr10 33736915 33737253 -111852035 + MER58B DNA MER1_type 1 341 0 704 203 84 45 chr10 33737273 33737475 -111851813 + MER63A DNA MER1_type 1 210 0 626 219 19 109 chr10 33738015 33738271 -111851017 + MER106A DNA MER1_type 1 233 -3 255 291 0 0 chr10 33738951 33739102 -111850186 + GA-rich Low_complexity Low_complexity 1 151 0 369 0 0 0 chr10 33739366 33739407 -111849881 + (CA)n Simple_repeat Simple_repeat 2 42 0 284 314 29 19 chr10 33741496 33741601 -111847687 + L2 LINE L2 3203 3308 -5 220 320 13 13 chr10 33742306 33742384 -111846904 - MIR SINE MIR -161 101 24 1513 188 45 10 chr10 33742384 33742551 -111846737 - AluJo SINE Alu -10 302 119 225 0 0 0 chr10 33742551 33742576 -111846712 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1513 188 45 10 chr10 33742576 33742700 -111846588 - AluJo SINE Alu -193 119 1 7393 215 70 61 chr10 33743013 33744131 -111845157 + L1ME1 LINE L1 2656 3763 -2403 1742 163 40 121 chr10 33744131 33744586 -111844702 - MER47B DNA MER2_type 0 418 1 7393 215 70 61 chr10 33744586 33745991 -111843297 + L1ME1 LINE L1 3763 5155 -1011 2650 151 38 13 chr10 33745991 33746514 -111842774 + L1MB8 LINE L1 5642 6177 -1 7393 215 70 61 chr10 33746514 33746717 -111842571 + L1ME1 LINE L1 5155 5355 -811 2266 101 3 0 chr10 33746717 33747015 -111842273 + AluSg SINE Alu 3 301 -9 7393 215 70 61 chr10 33747015 33747596 -111841692 + L1ME1 LINE L1 5355 6159 -7 1405 169 100 95 chr10 33749831 33750252 -111839036 - L1MB4 LINE L1 0 6180 5758 1028 166 102 15 chr10 33750252 33750457 -111838831 - AluJo SINE Alu -79 233 11 2607 172 37 16 chr10 33750471 33751343 -111837945 - L1MB4 LINE L1 -428 5752 4855 321 184 0 0 chr10 33751350 33751399 -111837889 + 5S rRNA rRNA 2 50 -71 2274 92 27 0 chr10 33751435 33751730 -111837558 - AluSq SINE Alu -10 303 1 300 53 0 0 chr10 33751910 33751948 -111837340 + (TTTTA)n Simple_repeat Simple_repeat 1 38 0 958 57 24 0 chr10 33751948 33752071 -111837217 - L1PA10 LINE L1 -21 6147 6022 476 210 159 46 chr10 33752660 33752855 -111836433 + L2 LINE L2 2231 2447 -867 533 251 153 18 chr10 33753100 33753323 -111835965 + MIR SINE MIR 10 262 0 207 290 210 0 chr10 33753618 33753718 -111835570 + MIR SINE MIR 129 249 -13 3108 107 23 90 chr10 33753876 33754532 -111834756 + MER4B LTR ERV1 1 779 0 468 226 20 0 chr10 33754532 33754634 -111834654 - MIR SINE MIR -4 258 155 3894 162 47 52 chr10 33754706 33755458 -111833830 - MER21B LTR ERV1 -115 748 1 896 206 3 128 chr10 33755478 33755784 -111833504 + MER21B LTR ERV1 41 308 -555 2298 150 60 0 chr10 33756190 33756589 -111832699 + MSTA LTR MaLR 6 428 0 3436 159 43 0 chr10 33756589 33757191 -111832097 + MSTA-int LTR MaLR 1 628 -1023 2154 130 45 17 chr10 33757191 33757545 -111831743 - THE1B LTR MaLR 0 364 1 11523 89 13 4 chr10 33757545 33759111 -111830177 - THE1B-int LTR MaLR 0 1580 1 722 156 57 0 chr10 33759111 33759233 -111830055 - THE1B LTR MaLR 0 364 236 1132 119 40 0 chr10 33759233 33759409 -111829879 - MST-int LTR MaLR -39 1612 1430 1396 112 23 28 chr10 33759410 33759625 -111829663 - THE1B LTR MaLR -150 214 1 5729 163 12 45 chr10 33759627 33760671 -111828617 + MSTA-int LTR MaLR 626 1635 -16 2319 155 41 5 chr10 33760681 33761093 -111828195 + MSTA LTR MaLR 1 427 -1 319 214 14 14 chr10 33761116 33761186 -111828102 + LTR16B LTR ERVL 395 464 0 184 219 24 0 chr10 33761361 33761402 -111827886 + L2 LINE L2 3272 3313 0 412 254 17 8 chr10 33761511 33761629 -111827659 + MER103 DNA DNA 1 119 -47 2183 103 24 0 chr10 33762242 33762534 -111826754 - AluSx SINE Alu -13 299 1 31 0 0 0 chr10 33762918 33762949 -111826339 + AT_rich Low_complexity Low_complexity 1 31 0 2466 148 58 22 chr10 33763145 33763517 -111825771 + MSTB LTR MaLR 1 391 -35 2303 137 73 14 chr10 33763517 33763861 -111825427 - THE1B LTR MaLR 0 364 1 2466 148 58 22 chr10 33763861 33763899 -111825389 + MSTB LTR MaLR 391 426 0 2197 84 7 37 chr10 33764629 33764927 -111824361 - AluY SINE Alu -22 289 1 2074 136 0 13 chr10 33764955 33765265 -111824023 + AluSx SINE Alu 1 306 -6 306 328 77 16 chr10 33765473 33765656 -111823632 + L1M4 LINE L1 3377 3570 -2576 585 295 63 59 chr10 33765688 33766193 -111823095 + L1M4 LINE L1 3732 4238 -1908 * 9153 165 95 15 chr10 33766186 33766996 -111822292 + L1MCa LINE L1 3 747 -5679 2083 114 11 0 chr10 33766996 33767276 -111822012 + AluSx SINE Alu 6 288 -24 228 35 0 0 chr10 33767279 33767308 -111821980 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 9153 165 95 15 chr10 33767308 33768337 -111820951 + L1MCa LINE L1 748 1994 -4432 3135 264 12 21 chr10 33768338 33769092 -111820196 + L1M3b LINE L1 11 757 -5524 4678 229 34 44 chr10 33769142 33771045 -111818243 + L1M3b LINE L1 647 2160 -4190 1976 113 88 0 chr10 33771045 33771328 -111817960 + AluSx SINE Alu 1 308 -4 4678 229 34 44 chr10 33771328 33772612 -111816676 + L1M3b LINE L1 2160 3455 -2895 285 136 0 0 chr10 33772603 33772647 -111816641 + L1MA7 LINE L1 5555 5598 -693 * 292 276 76 19 chr10 33772663 33772768 -111816520 - L2 LINE L2 -1262 2052 1942 270 259 0 0 chr10 33772768 33772822 -111816466 - L2 LINE L2 -7 3265 3212 3018 184 64 14 chr10 33772852 33773495 -111815793 + L1MA7 LINE L1 5617 6291 0 404 265 59 54 chr10 33773490 33773863 -111815425 + L1MC1 LINE L1 1129 1503 -4913 * 1761 149 32 36 chr10 33773878 33774186 -111815102 + AluJo SINE Alu 1 307 -5 276 358 88 10 chr10 33774193 33774397 -111814891 - L2 LINE L2 -1153 2161 1942 279 323 200 8 chr10 33774397 33774527 -111814761 - L2 LINE L2 -7 3265 3111 31003 94 8 28 chr10 33774746 33780410 -111808878 - L1PA7 LINE L1 -4 6465 902 11497 205 42 26 chr10 33780757 33781410 -111807878 + L1MC1 LINE L1 1985 2626 -3987 2071 108 0 7 chr10 33781410 33781696 -111807592 + AluSg SINE Alu 1 284 -26 11497 205 42 26 chr10 33781696 33782156 -111807132 + L1MC1 LINE L1 2626 3077 -3536 1505 196 7 21 chr10 33782156 33782442 -111806846 + AluJo SINE Alu 1 282 -30 11497 205 42 26 chr10 33782442 33785828 -111803460 + L1MC1 LINE L1 3077 6588 -25 419 285 96 16 chr10 33785882 33786205 -111803083 + L1M4 LINE L1 4259 4607 -1539 1734 177 87 9 chr10 33786350 33786714 -111802574 - MER82 DNA MER2_type -28 625 203 6136 142 49 3 chr10 33787260 33788231 -111801057 + Tigger1 DNA MER2_type 2 1017 -1401 327 155 309 0 chr10 33788244 33788341 -111800947 + L1ME1 LINE L1 5838 5964 -202 203 156 0 0 chr10 33788341 33788373 -111800915 + (CA)n Simple_repeat Simple_repeat 1 32 0 738 34 0 0 chr10 33788596 33788685 -111800603 + (GAAA)n Simple_repeat Simple_repeat 2 90 0 243 0 0 0 chr10 33788685 33788712 -111800576 + (GGGA)n Simple_repeat Simple_repeat 1 27 0 985 99 12 12 chr10 33788712 33788873 -111800415 + (GAAA)n Simple_repeat Simple_repeat 4 164 0 1747 175 72 52 chr10 33789096 33789484 -111799804 + MSTD LTR MaLR 1 396 0 180 371 0 0 chr10 33791494 33791564 -111797724 + MIR3 SINE MIR 85 154 -54 2380 106 53 34 chr10 33792289 33792646 -111796642 + THE1B LTR MaLR 1 364 0 1343 153 6 128 chr10 33792934 33793261 -111796027 - AluJo SINE Alu -25 287 1 2495 64 0 3 chr10 33793270 33793566 -111795722 - AluSp SINE Alu -18 295 1 1574 181 23 0 chr10 33793589 33793848 -111795440 - AluJo SINE Alu -37 275 11 316 304 54 9 chr10 33795078 33795190 -111794098 - L2 LINE L2 -3 3269 3153 2244 101 14 3 chr10 33797608 33797905 -111791383 - AluSp SINE Alu -13 300 1 652 292 130 24 chr10 33798159 33798529 -111790759 + MLT1J LTR MaLR 103 511 0 5873 90 11 60 chr10 33798900 33799768 -111789520 - LTR12 LTR ERV1 0 826 1 2209 105 0 0 chr10 33800595 33800880 -111788408 - AluSc SINE Alu -21 288 4 2078 120 0 29 chr10 33801279 33801588 -111787700 + AluSx SINE Alu 1 300 -12 2371 164 31 14 chr10 33801872 33802292 -111786996 - L1MB3 LINE L1 -298 6383 5957 1971 218 62 28 chr10 33802290 33802825 -111786463 - L1MB3 LINE L1 -2586 4058 3494 * 2187 141 0 0 chr10 33802825 33803123 -111786165 + AluSx SINE Alu 1 298 -14 1971 218 62 28 chr10 33803123 33803260 -111786028 - L1MB3 LINE L1 -3150 3494 3363 293 279 68 20 chr10 33803264 33803411 -111785877 + L1MA9 LINE L1 6083 6236 -76 2984 205 18 28 chr10 33803412 33804152 -111785136 - L1MB3 LINE L1 -4951 1695 964 240 163 0 0 chr10 33804224 33804267 -111785021 + CT-rich Low_complexity Low_complexity 1 43 0 391 267 37 7 chr10 33804314 33804449 -111784839 - L1MB3 LINE L1 -5587 955 817 264 257 14 14 chr10 33804497 33804567 -111784721 - L1M3d LINE L1 -5117 1448 1379 * 371 324 14 7 chr10 33804564 33804706 -111784582 - L1M3d LINE L1 -5700 946 804 243 263 58 100 chr10 33805008 33805267 -111784021 - L1M3d LINE L1 -6293 249 2 283 263 0 0 chr10 33805359 33805416 -111783872 - L2 LINE L2 -8 3305 3249 215 250 0 0 chr10 33805464 33805516 -111783772 - L2 LINE L2 0 3313 3262 576 322 116 27 chr10 33805815 33806414 -111782874 - L2 LINE L2 -208 3064 2403 1075 243 59 50 chr10 33806483 33806824 -111782464 + LTR16A1 LTR ERVL 114 457 0 1313 200 71 32 chr10 33807015 33807284 -111782004 + AluJo SINE Alu 2 284 -18 723 104 0 0 chr10 33807284 33807390 -111781898 + (GGGGA)n Simple_repeat Simple_repeat 3 108 0 1462 317 112 16 chr10 33807566 33808891 -111780397 + HERV16 LTR ERVL 579 2120 -3017 1392 216 5 81 chr10 33808914 33809307 -111779981 - MLT2B1 LTR ERVL -157 363 1 208 191 43 21 chr10 33809307 33809354 -111779934 - MIR SINE MIR -173 89 42 * 307 333 144 35 chr10 33809350 33809869 -111779419 - L2 LINE L2 -1018 2296 1721 182 289 0 0 chr10 33810121 33810166 -111779122 - L2 LINE L2 -844 2470 2426 1713 125 0 142 chr10 33810324 33810661 -111778627 + AluJo SINE Alu 1 289 -13 2274 168 58 5 chr10 33810824 33811222 -111778066 + MSTB LTR MaLR 8 426 0 318 258 180 16 chr10 33811228 33811356 -111777932 - MIR SINE MIR -112 150 2 362 309 30 12 chr10 33811392 33811557 -111777731 - L2 LINE L2 -1232 2082 1915 183 382 0 10 chr10 33812007 33812109 -111777179 - L2 LINE L2 -1177 2137 2037 828 233 33 0 chr10 33812195 33812345 -111776943 - FRAM SINE Alu -11 155 1 1880 97 0 8 chr10 33812398 33812645 -111776643 - AluSx SINE Alu -15 297 53 249 271 227 30 chr10 33813608 33813811 -111775477 + L1ME LINE L1 5582 5824 -297 2345 81 40 0 chr10 33813816 33814114 -111775174 + AluSp SINE Alu 1 310 -3 366 195 53 80 chr10 33814156 33814306 -111774982 + HAL1b LINE L1 1193 1308 -40 184 360 47 12 chr10 33816676 33816762 -111772526 - L2 LINE L2 -15 3257 3169 272 48 24 0 chr10 33818466 33818508 -111770780 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 195 292 105 48 chr10 33818781 33818990 -111770298 + L2 LINE L2 1796 2016 -1298 2280 96 0 7 chr10 33819745 33820038 -111769250 - AluSg SINE Alu -19 291 1 237 108 0 0 chr10 33820210 33820247 -111769041 + (GA)n Simple_repeat Simple_repeat 2 38 0 22 35 0 0 chr10 33820349 33820378 -111768910 + AT_rich Low_complexity Low_complexity 1 29 0 6719 101 31 18 chr10 33820463 33821642 -111767646 - L1MA4A LINE L1 -3 6300 5105 221 278 0 0 chr10 33822311 33822365 -111766923 + L3 LINE CR1 1509 1562 -15 206 373 36 0 chr10 33822466 33822576 -111766712 - L3b LINE CR1 -140 1443 1330 1521 151 0 0 chr10 33822632 33822871 -111766417 - Tigger5 DNA MER2_type 0 2323 2085 1255 169 14 24 chr10 33822861 33823074 -111766214 - Tigger5 DNA MER2_type -2085 238 28 * 221 116 0 23 chr10 33823849 33823892 -111765396 + (GGAA)n Simple_repeat Simple_repeat 1 42 0 194 287 183 9 chr10 33825094 33825209 -111764079 - MIR SINE MIR -19 243 109 228 67 0 0 chr10 33825259 33825289 -111763999 + (CTG)n Simple_repeat Simple_repeat 1 30 0 192 179 0 0 chr10 33825493 33825532 -111763756 + CT-rich Low_complexity Low_complexity 1 39 0 219 174 43 0 chr10 33825610 33825656 -111763632 - L2 LINE L2 -88 3184 3137 810 178 70 76 chr10 33825823 33826008 -111763280 + MER20 DNA MER1_type 36 219 0 278 316 26 0 chr10 33826219 33826333 -111762955 + MIR SINE MIR 30 146 -62 280 153 77 135 chr10 33826463 33826633 -111762655 - L1ME4a LINE L1 -11 6110 5951 3330 143 151 22 chr10 33826930 33827614 -111761674 - LTR48 LTR ERV1 0 787 16 744 149 65 39 chr10 33827683 33827837 -111761451 - LTR48 LTR ERV1 -31 756 599 633 241 76 2 chr10 33827922 33828082 -111761206 + L1PA16 LINE L1 5997 6163 -2 211 253 12 36 chr10 33828999 33829082 -111760206 + GA-rich Low_complexity Low_complexity 3 83 0 324 0 0 0 chr10 33829655 33829691 -111759597 + (TG)n Simple_repeat Simple_repeat 2 37 0 879 235 15 0 chr10 33831929 33832133 -111757155 - MIR SINE MIR -41 221 15 186 304 7 51 chr10 33832764 33832902 -111756386 + L2 LINE L2 2673 2804 -510 2140 156 51 13 chr10 33833677 33834109 -111755179 + MER61C LTR ERV1 1 433 -1 235 246 27 48 chr10 33834267 33834317 -111754971 + MIR SINE MIR 114 164 -98 1941 119 0 0 chr10 33834317 33834586 -111754702 + AluSx SINE Alu 38 306 -6 235 246 27 48 chr10 33834586 33834651 -111754637 + MIR SINE MIR 164 225 -37 283 265 113 13 chr10 33834805 33834956 -111754332 + L1ME4a LINE L1 5909 6074 -47 280 265 0 15 chr10 33836025 33836093 -111753195 - MLT1L LTR MaLR -221 394 328 * 404 287 77 20 chr10 33836079 33836274 -111753014 - MLT1L LTR MaLR -394 221 16 584 287 113 27 chr10 33836315 33836643 -111752645 + HAL1 LINE L1 1515 1870 -637 286 295 30 42 chr10 33837094 33837260 -111752028 + HAL1b LINE L1 743 906 -442 2345 220 72 78 chr10 33837351 33837866 -111751422 + L1MC5 LINE L1 6693 7201 -760 2544 167 6 41 chr10 33837866 33838358 -111750930 - L1PB4 LINE L1 -2 6154 5680 2345 220 72 78 chr10 33838358 33838846 -111750442 + L1MC5 LINE L1 7201 7690 -271 2381 87 0 3 chr10 33838897 33839197 -111750091 - AluSp SINE Alu -14 299 1 804 220 37 18 chr10 33840514 33840732 -111748556 + L1MC5 LINE L1 7705 7926 -35 2140 126 36 8 chr10 33841071 33841429 -111747859 - L1MB4 LINE L1 0 6180 5813 5422 175 9 9 chr10 33841430 33842644 -111746644 - L1MB3 LINE L1 -8 6158 4941 262 293 204 7 chr10 33843478 33843625 -111745663 - MIR SINE MIR -71 191 16 2090 124 58 28 chr10 33843948 33844312 -111744976 - THE1C LTR MaLR 0 375 1 1261 171 82 4 chr10 33844314 33844559 -111744729 - MER74A LTR ERVL -294 264 1 319 277 61 40 chr10 33844591 33844739 -111744549 - MIR SINE MIR -71 191 41 15330 130 24 7 chr10 33845415 33847791 -111741497 + Tigger1 DNA MER2_type 1 2417 -1 210 351 0 21 chr10 33848129 33848223 -111741065 - MIR3 SINE MIR -27 181 90 252 188 0 0 chr10 33848269 33848333 -111740955 + (CA)n Simple_repeat Simple_repeat 1 64 0 1078 189 98 80 chr10 33848390 33848676 -111740612 - MLT2B1 LTR ERVL 0 520 230 418 279 130 43 chr10 33848802 33849171 -111740117 - L1MB3 LINE L1 -1603 4526 4126 238 252 52 43 chr10 33849225 33849340 -111739948 - L1MB3 LINE L1 -3700 2429 2314 3791 249 61 30 chr10 33849560 33851132 -111738156 + L1MEc LINE L1 1658 3280 -2935 2471 83 0 0 chr10 33851132 33851432 -111737856 + AluSg SINE Alu 1 300 -10 3791 249 61 30 chr10 33851432 33851828 -111737460 + L1MEc LINE L1 3280 3662 -2553 550 246 18 13 chr10 33851824 33852005 -111737283 + L1MEc LINE L1 4051 4233 -1982 * 1580 277 114 59 chr10 33852314 33853666 -111735622 - L1MB3 LINE L1 -4816 1315 2 975 312 171 26 chr10 33854132 33855423 -111733865 - L2 LINE L2 0 3313 1836 355 200 14 136 chr10 33857084 33857224 -111732064 + L1ME4a LINE L1 5935 6057 -64 2214 110 20 0 chr10 33857253 33857554 -111731734 - AluSx SINE Alu -5 307 1 1733 134 0 4 chr10 33858098 33858352 -111730936 - AluSg SINE Alu -7 303 51 448 243 88 33 chr10 33858465 33858646 -111730642 - MIR SINE MIR -54 208 18 270 0 0 0 chr10 33858842 33858872 -111730416 + (CA)n Simple_repeat Simple_repeat 2 31 0 674 227 68 68 chr10 33860140 33860338 -111728950 + L1ME1 LINE L1 5891 6091 -75 2115 108 49 0 chr10 33860338 33860626 -111728662 + AluSx SINE Alu 3 304 -8 674 227 68 68 chr10 33860626 33860678 -111728610 + L1ME1 LINE L1 6090 6141 -25 1997 128 3 19 chr10 33861829 33862180 -111727108 - MER4A LTR ERV1 0 664 261 646 103 21 10 chr10 33862180 33862277 -111727011 - MER4A LTR ERV1 -566 98 1 193 179 26 0 chr10 33862315 33862354 -111726934 - L3 LINE CR1 -2 1575 1536 465 253 59 102 chr10 33862972 33863105 -111726183 - MER102a DNA MER1_type -1089 328 191 2242 161 43 5 chr10 33863105 33863521 -111725767 + MSTB1 LTR MaLR 1 432 0 465 253 59 102 chr10 33863521 33863657 -111725631 - MER102a DNA MER1_type -1226 191 71 2195 141 0 0 chr10 33863657 33863969 -111725319 - AluSx SINE Alu 0 312 1 465 253 59 102 chr10 33863969 33864003 -111725285 - MER102a DNA MER1_type -1346 71 37 384 308 158 21 chr10 33864048 33864383 -111724905 - L3 LINE CR1 -106 1471 1091 1080 199 41 8 chr10 33864393 33864701 -111724587 - MLT1A1 LTR MaLR 0 365 8 436 294 100 89 chr10 33864713 33865073 -111724215 - L3 LINE CR1 -514 1063 700 423 282 24 0 chr10 33865499 33865623 -111723665 + L1ME LINE L1 7 133 -5937 853 262 119 107 chr10 33865763 33866175 -111723113 - LTR16A LTR ERVL -33 417 1 222 214 11 34 chr10 33866248 33866337 -111722951 + (TA)n Simple_repeat Simple_repeat 2 88 0 1190 186 5 0 chr10 33866379 33866572 -111722716 - MSTA LTR MaLR -234 194 1 252 0 0 0 chr10 33866605 33866633 -111722655 + (CA)n Simple_repeat Simple_repeat 2 29 0 2788 96 73 0 chr10 33866678 33867075 -111722213 + MSTA LTR MaLR 1 426 -2 2236 183 38 62 chr10 33867294 33867793 -111721495 - MLT2B1 LTR ERVL -25 464 1 1734 173 3 10 chr10 33867881 33868182 -111721106 + AluJb SINE Alu 1 299 -13 331 284 89 64 chr10 33868349 33868913 -111720375 + L1ME LINE L1 560 1156 -4914 240 254 107 107 chr10 33869027 33869232 -111720056 - MIR SINE MIR -50 212 8 231 239 262 0 chr10 33870509 33870593 -111718695 + MIR SINE MIR 44 149 -62 1572 171 68 54 chr10 33870716 33871085 -111718203 - MLT1A2 LTR MaLR 0 374 1 353 214 69 92 chr10 33871491 33871622 -111717666 + MIR SINE MIR 126 253 -9 1280 257 29 11 chr10 33871935 33872363 -111716925 - MLT1H1 LTR MaLR -61 481 1 260 356 68 6 chr10 33872478 33872641 -111716647 + L2 LINE L2 3141 3313 0 313 374 61 0 chr10 33872680 33872795 -111716493 + L2 LINE L2 3142 3263 -9 249 108 0 0 chr10 33873184 33873221 -111716067 + (CA)n Simple_repeat Simple_repeat 2 38 0 332 103 0 29 chr10 33875674 33875742 -111713546 + (CAGAGA)n Simple_repeat Simple_repeat 2 67 0 389 150 14 186 chr10 33875927 33876067 -111713221 - MIR SINE MIR -24 238 123 3197 159 43 19 chr10 33876556 33877240 -111712048 + Tigger7 DNA MER2_type 1 2487 0 5970 226 94 17 chr10 33878269 33880419 -111708869 + L1M4 LINE L1 2 2448 -4377 639 203 69 57 chr10 33880711 33880957 -111708331 - MER112 DNA MER1_type -6 254 6 1156 271 121 27 chr10 33881141 33881891 -111707397 + L2 LINE L2 2489 3311 -2 306 341 32 23 chr10 33882282 33882499 -111706789 - MARNA DNA Mariner -151 435 217 267 257 14 14 chr10 33883135 33883205 -111706083 + L1MDa LINE L1 35 104 -6436 317 252 44 46 chr10 33883219 33883332 -111705956 - L1MC4 LINE L1 -1337 6705 6613 1390 198 52 22 chr10 33883439 33883763 -111705525 - Ricksha DNA DNA -1528 518 185 * 3664 139 16 23 chr10 33883614 33884231 -111705057 - HERV16 LTR ERVL -7 5757 5145 10060 50 3 0 chr10 33884246 33886248 -111703040 - L1PA5 LINE L1 0 6154 4148 1165 75 6 0 chr10 33886255 33886414 -111702874 - L1PA5 LINE L1 -3304 2842 2683 * 18660 56 1 3 chr10 33886413 33888770 -111700518 - L1P LINE L1 -1999 4147 1796 1460 180 123 45 chr10 33888770 33889130 -111700158 - MER4E LTR ERV1 -409 494 1 349 392 46 11 chr10 33889224 33889487 -111699801 - HERV16 LTR ERVL -3419 1577 1306 762 325 38 30 chr10 33889517 33890022 -111699266 - HERV16 LTR ERVL -3779 1217 709 253 200 0 0 chr10 33890622 33890667 -111698621 - LTR16C LTR ERVL -12 479 435 2296 86 3 0 chr10 33890668 33890971 -111698317 + AluSp SINE Alu 1 304 -9 595 253 114 15 chr10 33891027 33891229 -111698059 - LTR16C LTR ERVL -59 432 211 396 151 41 0 chr10 33891283 33891356 -111697932 - AluSc SINE Alu -5 294 219 1631 180 14 7 chr10 33892469 33892763 -111696525 - AluJb SINE Alu -16 296 1 696 171 158 7 chr10 33892857 33893009 -111696279 - MER45A DNA AcHobo 0 178 4 350 295 23 8 chr10 33893026 33893155 -111696133 + MIR3 SINE MIR 11 141 -67 508 258 44 22 chr10 33893480 33893662 -111695626 + MARNA DNA Mariner 167 352 -234 404 321 38 19 chr10 33893782 33893991 -111695297 + MARNA DNA Mariner 358 570 -16 2118 109 3 0 chr10 33894033 33894326 -111694962 + AluSp SINE Alu 1 294 -19 2083 118 0 3 chr10 33896395 33896700 -111692588 + AluSx SINE Alu 1 304 -8 398 199 67 0 chr10 33896936 33897042 -111692246 - L1MB4 LINE L1 -279 5889 5759 828 152 132 39 chr10 33897042 33897246 -111692042 - AluJo SINE Alu -79 233 11 2638 177 36 16 chr10 33897248 33898132 -111691156 - L1MB4 LINE L1 -419 5764 4855 326 211 0 0 chr10 33898139 33898191 -111691097 + 5S rRNA rRNA 2 53 -68 2380 86 0 0 chr10 33898224 33898526 -111690762 - AluSx SINE Alu -10 302 1 4645 242 36 37 chr10 33898526 33900429 -111688859 - L1M1 LINE L1 -4137 2213 647 3115 271 12 19 chr10 33900487 33901233 -111688055 - L1M1 LINE L1 -5530 751 11 8869 165 96 18 chr10 33901234 33902269 -111687019 - L1MCa LINE L1 -4432 1994 1042 1979 117 11 0 chr10 33902269 33902575 -111686713 - AluSx SINE Alu 0 314 6 8869 165 96 18 chr10 33902575 33903385 -111685903 - L1MCa LINE L1 -5384 1042 3 24 0 0 0 chr10 33904199 33904223 -111685065 + AT_rich Low_complexity Low_complexity 1 24 0 770 165 8 0 chr10 33904223 33904350 -111684938 - FLAM_A SINE Alu -4 129 2 1061 65 7 0 chr10 33904647 33904785 -111684503 - L1MA3 LINE L1 -3 6302 6164 553 250 79 18 chr10 33906145 33906348 -111682940 - MIR SINE MIR -48 214 1 181 281 35 0 chr10 33906403 33906460 -111682828 - MIR SINE MIR -150 112 54 344 319 106 6 chr10 33906631 33906791 -111682497 + L2 LINE L2 2494 2669 -645 697 308 112 39 chr10 33906831 33906998 -111682290 + L2 LINE L2 2815 2968 -345 550 141 11 0 chr10 33906998 33907090 -111682198 + HY4 scRNA scRNA 1 93 0 697 308 112 39 chr10 33907090 33907387 -111681901 + L2 LINE L2 2968 3313 0 260 264 222 21 chr10 33908058 33908202 -111681086 + MIR SINE MIR 28 200 -62 414 306 65 48 chr10 33908307 33908493 -111680795 + MIR3 SINE MIR 20 208 0 1705 97 0 0 chr10 33908564 33908790 -111680498 + AluSg/x SINE Alu 82 307 -5 255 250 50 86 chr10 33908913 33909028 -111680260 + MER5B DNA MER1_type 1 124 -65 1521 179 17 10 chr10 33909028 33909325 -111679963 - AluJo SINE Alu -13 299 1 255 250 50 86 chr10 33909325 33909359 -111679929 + MER5B DNA MER1_type 124 158 -31 1915 168 18 0 chr10 33909669 33909996 -111679292 - MLT1B LTR MaLR -57 333 1 303 28 0 0 chr10 33911059 33911095 -111678193 + (TG)n Simple_repeat Simple_repeat 1 36 0 1577 157 9 63 chr10 33911927 33912246 -111677042 - AluJo SINE Alu -7 305 4 2312 83 0 3 chr10 33914193 33914495 -111674793 - AluSq SINE Alu -12 301 1 237 310 34 96 chr10 33914758 33914824 -111674464 - L3 LINE CR1 -418 1159 1090 2134 89 38 0 chr10 33914824 33915116 -111674172 + AluSp SINE Alu 1 303 -10 237 310 34 96 chr10 33915116 33915372 -111673916 - L3 LINE CR1 -487 1090 857 869 265 17 21 chr10 33915405 33915696 -111673592 - L1ME3A LINE L1 -5 6165 5876 342 0 0 0 chr10 33915967 33916005 -111673283 + (TG)n Simple_repeat Simple_repeat 2 39 0 226 161 71 0 chr10 33916341 33916453 -111672835 + (TA)n Simple_repeat Simple_repeat 1 120 0 1829 148 0 7 chr10 33917530 33917821 -111671467 - AluJo SINE Alu -23 289 1 1110 275 99 23 chr10 33917822 33918215 -111671073 - LTR33 LTR ERVL -55 466 44 1765 151 0 35 chr10 33918881 33919192 -111670096 + AluJb SINE Alu 6 305 -7 598 284 77 42 chr10 33919197 33919439 -111669849 - ERVL LTR ERVL -1206 4558 4303 2442 169 20 2 chr10 33919439 33919847 -111669441 + MER47B DNA MER2_type 1 415 -3 598 284 77 42 chr10 33919847 33919889 -111669399 - ERVL LTR ERVL -1461 4303 4264 950 269 18 4 chr10 33919981 33920256 -111669032 - ERVL LTR ERVL -1719 4045 3767 1722 206 48 25 chr10 33920453 33920846 -111668442 - MLT2D LTR ERVL -12 402 1 436 328 103 48 chr10 33920870 33921096 -111668192 - ERVL LTR ERVL -2307 3457 3204 2021 150 127 18 chr10 33921096 33921482 -111667806 - MSTA LTR MaLR 0 428 1 436 328 103 48 chr10 33921482 33921606 -111667682 - ERVL LTR ERVL -2560 3204 3088 1790 298 56 36 chr10 33921728 33922669 -111666619 - ERVL LTR ERVL -2111 2885 1906 1095 344 99 29 chr10 33922667 33923677 -111665611 - ERVL LTR ERVL -3823 1941 861 * 1296 131 10 10 chr10 33923738 33923937 -111665351 + MER4B LTR ERV1 1 199 -411 1982 122 3 52 chr10 33923984 33924313 -111664975 + MER4E LTR ERV1 466 778 -1 1118 284 108 33 chr10 33924792 33925275 -111664013 - LTR33 LTR ERVL -2 519 1 2082 147 75 15 chr10 33925527 33925860 -111663428 + THE1B LTR MaLR 1 353 -11 11830 84 5 0 chr10 33925864 33927354 -111661934 + THE1B-int LTR MaLR 84 1580 0 2303 116 73 14 chr10 33927354 33927698 -111661590 + THE1B LTR MaLR 1 364 0 4212 89 11 101 chr10 33928766 33929496 -111659792 - MER4A LTR ERV1 0 664 1 861 321 42 75 chr10 33929988 33930489 -111658799 - L2 LINE L2 -448 2866 2395 2609 139 25 28 chr10 33930489 33930675 -111658613 + MSTB1 LTR MaLR 2 187 -245 225 0 0 0 chr10 33930675 33930700 -111658588 + (CA)n Simple_repeat Simple_repeat 2 26 0 2609 139 25 28 chr10 33930700 33930945 -111658343 + MSTB1 LTR MaLR 187 432 0 861 321 42 75 chr10 33930945 33931176 -111658112 - L2 LINE L2 -919 2395 2158 203 356 97 33 chr10 33931176 33931536 -111657752 + L2 LINE L2 2844 3226 -46 180 277 62 0 chr10 33931527 33931592 -111657696 + L2 LINE L2 2914 2982 -290 * 246 287 30 20 chr10 33931651 33931752 -111657536 - L2 LINE L2 -494 2820 2719 217 243 14 57 chr10 33931943 33932013 -111657275 - L2 LINE L2 -825 2489 2423 331 273 114 36 chr10 33932375 33932708 -111656580 + L1MC4 LINE L1 7682 8040 -2 348 346 13 26 chr10 33932810 33932963 -111656325 + MER5A DNA MER1_type 7 157 -32 319 227 9 91 chr10 33933026 33933136 -111656152 + MIR SINE MIR 66 166 -96 1054 150 0 99 chr10 33933163 33933396 -111655892 - AluJo SINE Alu -13 299 90 212 278 183 0 chr10 33933524 33933639 -111655649 - MIR SINE MIR -3 259 124 256 132 0 0 chr10 33933658 33933696 -111655592 - MLT1D LTR MaLR 0 505 468 3721 125 36 0 chr10 33933696 33934281 -111655007 - LTR24C LTR ERV1 0 635 30 1824 155 50 83 chr10 33934263 33934461 -111654827 - MLT1D LTR MaLR -119 386 183 * 2103 187 72 119 chr10 33934461 33935224 -111654064 - LTR8A LTR ERV1 0 727 1 1824 155 50 83 chr10 33935224 33935259 -111654029 - MLT1D LTR MaLR -322 183 148 2007 142 0 0 chr10 33935259 33935554 -111653734 + AluSx SINE Alu 1 295 -17 1824 155 50 83 chr10 33935554 33935718 -111653570 - MLT1D LTR MaLR -357 148 1 632 205 38 102 chr10 33936371 33936664 -111652624 - L1ME4a LINE L1 -176 5945 5672 1397 191 70 0 chr10 33936739 33937012 -111652276 - AluJo SINE Alu -20 292 1 21 36 0 0 chr10 33937012 33937040 -111652248 + AT_rich Low_complexity Low_complexity 1 28 0 216 274 0 16 chr10 33937207 33937269 -111652019 + CT-rich Low_complexity Low_complexity 5 65 0 2265 82 7 0 chr10 33937915 33938218 -111651070 - AluSp SINE Alu -8 305 1 455 312 93 11 chr10 33938420 33938620 -111650668 - MIR SINE MIR -40 222 4 217 376 112 0 chr10 33938723 33938848 -111650440 + L2 LINE L2 3117 3255 -17 458 282 151 62 chr10 33939587 33939837 -111649451 - MLT1L LTR MaLR 0 615 389 1549 160 43 43 chr10 33939837 33940137 -111649151 - AluJo SINE Alu -12 300 1 458 282 151 62 chr10 33940137 33940449 -111648839 - MLT1L LTR MaLR -226 389 3 1865 151 6 22 chr10 33940742 33941089 -111648199 - AluSx SINE Alu 0 342 1 551 279 35 35 chr10 33942301 33942473 -111646815 - MLT1J LTR MaLR -156 355 184 243 271 140 0 chr10 33942483 33942590 -111646698 - L1MCc LINE L1 -4431 2691 2570 1962 135 3 0 chr10 33942608 33942897 -111646391 - AluSx SINE Alu -14 298 9 518 213 49 129 chr10 33942912 33942956 -111646332 - L1M2 LINE L1 -4246 1970 1924 240 111 0 0 chr10 33942956 33943001 -111646287 + (CA)n Simple_repeat Simple_repeat 2 46 0 518 213 49 129 chr10 33943001 33943320 -111645968 - L1M2 LINE L1 -4292 1924 1564 * 43044 56 5 1 chr10 33943319 33949441 -111639847 + L1PA5 LINE L1 11 6154 0 1671 82 24 4 chr10 33949441 33949684 -111639604 + L1MA2 LINE L1 6045 6304 0 1737 168 0 0 chr10 33949761 33950047 -111639241 - AluJb SINE Alu -7 305 20 947 263 103 41 chr10 33950047 33950739 -111638549 - L1MCc LINE L1 -4893 1530 1262 547 313 46 51 chr10 33951245 33951679 -111637609 - L1MCc LINE L1 -5985 438 7 207 69 0 0 chr10 33952156 33952185 -111637103 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1884 130 7 21 chr10 33952188 33952473 -111636815 - AluSx SINE Alu -31 281 1 769 187 0 0 chr10 33953814 33953948 -111635340 - MER94 DNA DNA 0 134 1 338 303 40 40 chr10 33956246 33956421 -111632867 - L2 LINE L2 -219 3053 2879 282 160 0 0 chr10 33956498 33956548 -111632740 + (TG)n Simple_repeat Simple_repeat 2 51 0 368 270 36 36 chr10 33957803 33957914 -111631374 + L2 LINE L2 3203 3313 0 1084 233 24 12 chr10 33958171 33958424 -111630864 - MLT-int LTR MaLR -1093 642 387 1538 109 101 16 chr10 33958424 33958671 -111630617 - MSTA LTR MaLR 0 428 161 743 158 211 7 chr10 33958906 33959058 -111630230 - MSTA LTR MaLR -245 183 1 9816 129 7 54 chr10 33959059 33960714 -111628574 - MSTA-int LTR MaLR -1 1579 3 1721 152 156 9 chr10 33960716 33961031 -111628257 - MSTA LTR MaLR 0 428 68 880 200 43 0 chr10 33961031 33961221 -111628067 - MLT-int LTR MaLR -1477 103 32 247 257 138 18 chr10 33963823 33963932 -111625356 + L2 LINE L2 2924 3045 -227 248 292 97 18 chr10 33964759 33964872 -111624416 + MIR SINE MIR 20 141 -67 201 245 20 0 chr10 33965051 33965100 -111624188 + MIR3 SINE MIR 151 200 -8 321 219 0 117 chr10 33965929 33966057 -111623231 - L1ME4a LINE L1 0 6121 6009 216 0 0 0 chr10 33966080 33966104 -111623184 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 243 319 26 9 chr10 33966104 33966211 -111623077 - L1ME4a LINE L1 -198 5923 5815 2119 109 6 3 chr10 33966214 33966525 -111622763 - AluSx SINE Alu 0 312 1 446 310 108 25 chr10 33966754 33966957 -111622331 + MIR SINE MIR 1 220 -42 2225 116 7 3 chr10 33966994 33967304 -111621984 + AluSq SINE Alu 1 311 -2 1934 172 20 20 chr10 33967331 33967721 -111621567 + MLT1B LTR MaLR 1 390 0 409 240 10 0 chr10 33969224 33969320 -111619968 - MIR SINE MIR -111 151 55 401 214 42 10 chr10 33969989 33970094 -111619194 - L1ME4a LINE L1 -430 5736 5641 2672 173 20 9 chr10 33970096 33970554 -111618734 + Tigger1 DNA MER2_type 2 464 -1954 1996 166 119 8 chr10 33970554 33970939 -111618349 - MSTA LTR MaLR 0 428 1 2619 100 23 18 chr10 33970939 33971330 -111617958 - MSTA-int LTR MaLR 0 1580 1188 11167 116 19 15 chr10 33971330 33971841 -111617447 + Tigger1 DNA MER2_type 456 963 -1455 2391 92 0 0 chr10 33971841 33972136 -111617152 - AluY SINE Alu -16 295 1 1781 192 7 0 chr10 33972139 33972441 -111616847 - AluSx SINE Alu -8 304 1 11167 116 19 15 chr10 33972441 33973634 -111615654 + Tigger1 DNA MER2_type 964 2171 -247 4244 215 210 40 chr10 33973637 33974312 -111614976 - L1MDa LINE L1 -4658 1882 1323 2556 66 0 3 chr10 33974312 33974613 -111614675 + AluY SINE Alu 1 300 -11 4244 215 210 40 chr10 33974613 33974644 -111614644 - L1MDa LINE L1 -5217 1323 1299 207 0 0 0 chr10 33974644 33974667 -111614621 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4244 215 210 40 chr10 33974667 33975477 -111613811 - L1MDa LINE L1 -5241 1299 107 600 127 0 48 chr10 33975492 33975681 -111613607 + (TA)n Simple_repeat Simple_repeat 1 180 0 214 241 30 0 chr10 33975717 33975883 -111613405 + (TA)n Simple_repeat Simple_repeat 2 172 0 525 286 71 43 chr10 33976005 33976355 -111612933 + L2 LINE L2 2859 3218 -95 2055 116 3 23 chr10 33976358 33976660 -111612628 - AluSx SINE Alu -16 296 1 306 294 151 8 chr10 33977277 33977403 -111611885 - MIR3 SINE MIR -22 186 43 876 102 17 0 chr10 33977555 33977673 -111611615 - FLAM_C SINE Alu -17 126 7 376 161 0 5 chr10 33977995 33978089 -111611199 - FLAM_C SINE Alu 0 147 64 346 303 109 11 chr10 33978356 33978531 -111610757 + MIR SINE MIR 47 238 -24 1956 143 3 0 chr10 33978700 33978986 -111610302 - AluSx SINE Alu -11 301 15 2070 175 16 71 chr10 33979039 33979473 -111609815 + MLT1C LTR MaLR 36 446 -21 1696 169 172 5 chr10 33979473 33979840 -111609448 - MSTA LTR MaLR 0 428 1 2070 175 16 71 chr10 33979840 33979856 -111609432 + MLT1C LTR MaLR 446 461 -6 1532 213 78 23 chr10 33979873 33980268 -111609020 + MER63B DNA MER1_type 1 417 -19 313 302 69 38 chr10 33981234 33981393 -111607895 + MIR SINE MIR 62 225 -37 216 97 0 0 chr10 33981427 33981458 -111607830 + (GGA)n Simple_repeat Simple_repeat 3 33 0 5285 201 24 9 chr10 33981887 33983070 -111606218 + L1 LINE L1 4075 5274 -872 738 209 92 34 chr10 33983784 33983990 -111605298 + MER20 DNA MER1_type 2 219 0 2158 123 7 0 chr10 33984325 33984626 -111604662 - AluSg1 SINE Alu -6 303 1 2152 112 0 11 chr10 33984642 33984929 -111604359 - AluSx SINE Alu -28 284 1 2264 95 3 3 chr10 33985018 33985322 -111603966 - AluSx SINE Alu -8 304 1 1355 161 24 0 chr10 33985330 33985541 -111603747 - Tigger3(Golem) DNA MER2_type -2813 216 1 202 225 39 39 chr10 33985739 33985868 -111603420 + G-rich Low_complexity Low_complexity 2 130 0 335 262 99 0 chr10 33987070 33987211 -111602077 - MIR3 SINE MIR -5 203 49 1712 177 0 3 chr10 33987644 33987926 -111601362 + AluJo SINE Alu 1 281 -31 566 82 12 0 chr10 33987929 33988014 -111601274 + (GGAA)n Simple_repeat Simple_repeat 4 89 0 267 70 0 70 chr10 33988477 33988520 -111600768 + AluJ/FLAM SINE Alu 21 60 -242 425 215 11 11 chr10 33988520 33988613 -111600675 - AluJo SINE Alu -133 179 87 2579 80 0 43 chr10 33988801 33989174 -111600114 - MER4A LTR ERV1 -307 357 1 2079 153 0 7 chr10 33989356 33989657 -111599631 + AluSx SINE Alu 1 299 -13 183 42 0 0 chr10 33989661 33989685 -111599603 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 245 341 0 0 chr10 33989869 33989957 -111599331 + (TGAA)n Simple_repeat Simple_repeat 1 88 0 2329 181 12 5 chr10 33989974 33990161 -111599127 + MSTB LTR MaLR 14 198 -228 5235 46 16 0 chr10 33990161 33990788 -111598500 + L1PA8 LINE L1 5532 6168 -4 2329 181 12 5 chr10 33990788 33991010 -111598278 + MSTB LTR MaLR 198 426 0 457 268 38 65 chr10 33992385 33992646 -111596642 + L1ME4a LINE L1 5509 5762 -359 879 243 201 25 chr10 33992677 33993244 -111596044 - Charlie7 DNA MER1_type -23 2589 1923 2554 88 0 0 chr10 33993269 33993600 -111595688 - L1PA13 LINE L1 -8 6155 5825 283 0 23 45 chr10 33993602 33993646 -111595642 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 2049 117 7 3 chr10 33993646 33993928 -111595360 - AluSx SINE Alu -29 283 1 411 263 59 7 chr10 33993931 33994083 -111595205 + Charlie7 DNA MER1_type 1396 1555 -1057 1401 122 0 0 chr10 33994104 33994312 -111594976 + AluSq SINE Alu 95 302 0 1046 250 16 0 chr10 33994360 33994612 -111594676 - MIR SINE MIR -2 260 5 2445 225 187 51 chr10 33994642 33994957 -111594331 - Charlie7 DNA MER1_type -1296 1316 1045 2264 100 0 16 chr10 33994957 33995266 -111594022 - AluSq SINE Alu -7 306 3 1928 154 3 0 chr10 33995276 33995562 -111593726 - AluJb SINE Alu -25 287 1 2445 225 187 51 chr10 33995562 33996046 -111593242 - Charlie7 DNA MER1_type -1574 1038 621 1041 127 0 58 chr10 33996046 33996084 -111593204 - L1PB4 LINE L1 -1 6155 6116 1882 136 4 0 chr10 33996084 33996349 -111592939 - AluSx SINE Alu -12 300 35 1041 127 0 58 chr10 33996349 33996499 -111592789 - L1PB4 LINE L1 -40 6116 5978 2445 225 187 51 chr10 33996499 33996811 -111592477 - Charlie7 DNA MER1_type -1991 621 40 276 278 43 9 chr10 33996830 33996945 -111592343 + L1ME4a LINE L1 5791 5909 -212 1669 172 111 18 chr10 33997113 33997508 -111591780 + MSTB1 LTR MaLR 1 432 0 1111 97 0 7 chr10 33997941 33998086 -111591202 + FRAM SINE Alu 1 140 -36 2154 127 0 0 chr10 33998546 33998838 -111590450 - AluSx SINE Alu -12 300 9 1039 115 0 0 chr10 33998840 33998979 -111590309 - AluSq/x SINE Alu -174 139 1 1525 180 20 39 chr10 33999044 33999349 -111589939 + AluJo SINE Alu 1 299 -13 533 252 19 48 chr10 33999424 33999634 -111589654 - MIR SINE MIR -57 205 2 228 296 0 0 chr10 34000078 34000203 -111589085 + (TG)n Simple_repeat Simple_repeat 2 126 0 457 125 102 0 chr10 34001924 34002012 -111587276 + L1MB3 LINE L1 6080 6176 -7 1700 181 6 22 chr10 34002015 34002330 -111586958 - AluJo SINE Alu 0 312 3 2094 105 87 19 chr10 34002330 34002653 -111586635 + THE1B LTR MaLR 1 345 -19 1674 83 5 14 chr10 34003055 34003271 -111586017 + AluSq SINE Alu 1 214 -99 1473 163 4 0 chr10 34003278 34003505 -111585783 - AluJb SINE Alu -82 230 3 729 138 50 50 chr10 34003507 34003666 -111585622 + L1MB4 LINE L1 6020 6178 -2 207 88 0 0 chr10 34003795 34003829 -111585459 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 207 0 0 0 chr10 34003828 34003851 -111585437 + (TC)n Simple_repeat Simple_repeat 2 24 0 740 130 16 32 chr10 34003851 34003974 -111585314 - AluSx SINE Alu -10 299 179 285 44 267 0 chr10 34003975 34004020 -111585268 + AluSg/x SINE Alu 138 194 -106 1345 106 0 32 chr10 34004021 34004209 -111585079 - AluSx SINE Alu -130 182 1 212 280 121 51 chr10 34005262 34005419 -111583869 + MIR SINE MIR 24 191 -71 2025 137 7 10 chr10 34005424 34005716 -111583572 + AluSx SINE Alu 1 291 -21 471 269 32 19 chr10 34005800 34005956 -111583332 - MIR SINE MIR -10 252 95 1943 162 0 7 chr10 34005980 34006288 -111583000 + AluJo SINE Alu 1 306 -6 787 157 0 0 chr10 34006309 34006424 -111582864 + FLAM_C SINE Alu 4 118 -15 1505 174 89 0 chr10 34007926 34008208 -111581080 - AluJo SINE Alu -3 309 3 1020 135 22 17 chr10 34008696 34008874 -111580414 + L1PA16 LINE L1 5979 6157 -9 21 82 0 0 chr10 34009608 34009657 -111579631 + AT_rich Low_complexity Low_complexity 1 49 0 4206 192 120 35 chr10 34009732 34010691 -111578597 - Charlie1 DNA MER1_type 0 2761 1885 2020 144 0 0 chr10 34010691 34010982 -111578306 + AluJb SINE Alu 1 291 -21 4206 192 120 35 chr10 34010982 34011030 -111578258 - Charlie1 DNA MER1_type -876 1885 1842 2360 108 0 13 chr10 34011030 34011344 -111577944 + AluSg SINE Alu 1 310 0 4206 192 120 35 chr10 34011344 34011512 -111577776 - Charlie1 DNA MER1_type -919 1842 1485 1162 200 225 48 chr10 34011512 34012091 -111577197 + L1MC4 LINE L1 7373 7785 0 242 182 68 68 chr10 34012167 34012255 -111577033 + L1MC4a LINE L1 6052 6139 -1669 1235 186 127 22 chr10 34012268 34012543 -111576745 - AluJo SINE Alu -8 304 1 1896 139 0 4 chr10 34012574 34012854 -111576434 - AluJo SINE Alu -23 289 11 423 296 117 41 chr10 34013140 34013436 -111575852 - L1M4 LINE L1 -2916 3230 2958 1915 163 3 6 chr10 34013436 34013749 -111575539 - AluJo SINE Alu 0 312 1 423 296 117 41 chr10 34013749 34013963 -111575325 - L1M4 LINE L1 -3188 2958 2681 852 107 0 8 chr10 34014182 34014303 -111574985 - AluSg/x SINE Alu -17 295 176 283 244 65 24 chr10 34014313 34014436 -111574852 - HAL1b LINE L1 -539 809 682 328 244 156 19 chr10 34014488 34014648 -111574640 - L1ME3A LINE L1 -182 6057 5876 5176 255 116 28 chr10 34014678 34014768 -111574520 - L1MEc LINE L1 -1303 4912 4831 1477 110 13 31 chr10 34014768 34014996 -111574292 + MER30 DNA MER1_type 4 227 -3 5176 255 116 28 chr10 34014996 34015153 -111574135 - L1MEc LINE L1 -1384 4831 4689 2465 66 10 0 chr10 34015153 34015458 -111573830 - AluY SINE Alu -3 308 1 5176 255 116 28 chr10 34015458 34017538 -111571750 - L1MEc LINE L1 -1526 4689 2376 2069 125 4 0 chr10 34017538 34017820 -111571468 + AluSx SINE Alu 1 313 0 198 33 33 0 chr10 34017820 34017850 -111571438 + (CAAA)n Simple_repeat Simple_repeat 2 176 0 5176 255 116 28 chr10 34017850 34018057 -111571231 - L1MEc LINE L1 -3839 2376 2189 265 65 109 0 chr10 34018223 34018269 -111571019 - L1PA15 LINE L1 0 6165 6115 2783 90 29 0 chr10 34018225 34018635 -111570653 - L1PA13 LINE L1 0 6163 5742 225 0 0 0 chr10 34018748 34018773 -111570515 + (CA)n Simple_repeat Simple_repeat 2 26 0 507 282 148 37 chr10 34018943 34019333 -111569955 - L1MEc LINE L1 -4677 1540 1195 180 0 0 0 chr10 34019333 34019353 -111569935 + (TTA)n Simple_repeat Simple_repeat 2 21 0 507 282 148 37 chr10 34019353 34019761 -111569527 - L1MEc LINE L1 -5022 1195 791 441 204 88 18 chr10 34019836 34019949 -111569339 - L1ME2 LINE L1 -8 6156 6036 481 237 53 0 chr10 34019984 34020136 -111569152 + L1ME1 LINE L1 5733 5892 -274 1914 108 22 4 chr10 34020148 34020464 -111568824 + AluSx SINE Alu 1 321 0 479 327 149 18 chr10 34020537 34020873 -111568415 - L3 LINE CR1 -805 772 393 1966 130 0 0 chr10 34021127 34021453 -111567835 + AluSx SINE Alu 1 326 0 921 155 113 36 chr10 34021729 34021923 -111567365 + MER2 DNA MER2_type 1 209 -136 232 233 100 0 chr10 34021969 34022029 -111567259 + MER2 DNA MER2_type 280 345 0 242 61 0 0 chr10 34022998 34023031 -111566257 + MER63C DNA MER1_type 1 33 -897 2665 181 91 16 chr10 34023079 34023697 -111565591 + MER63C DNA MER1_type 131 794 -136 1928 232 95 54 chr10 34023735 34024085 -111565203 - L1MC5 LINE L1 -455 7506 7172 2474 53 0 3 chr10 34024085 34024389 -111564899 - AluY SINE Alu -8 303 1 1928 232 95 54 chr10 34024389 34024992 -111564296 - L1MC5 LINE L1 -789 7172 6518 22 35 0 0 chr10 34026957 34026986 -111562302 + AT_rich Low_complexity Low_complexity 1 29 0 255 317 0 12 chr10 34027095 34027177 -111562111 + Charlie5 DNA MER1_type 2 82 -2530 1985 61 0 27 chr10 34027177 34027438 -111561850 - AluY SINE Alu -21 290 37 2192 153 77 34 chr10 34027477 34028067 -111561221 - L1MB3 LINE L1 -519 5664 5068 * 2370 140 110 7 chr10 34028060 34028523 -111560765 + L1MB3 LINE L1 5666 6176 -7 256 152 0 22 chr10 34028524 34028570 -111560718 + Charlie5 DNA MER1_type 163 207 -2405 * 264 176 0 20 chr10 34028532 34028583 -111560705 - MER3 DNA MER1_type -123 86 37 359 229 110 28 chr10 34028984 34029093 -111560195 + MIR3 SINE MIR 68 185 -23 1694 164 67 12 chr10 34029151 34029481 -111559807 + MER7A DNA MER2_type 1 346 0 23 0 0 0 chr10 34029949 34029972 -111559316 + GC_rich Low_complexity Low_complexity 1 23 0 2192 88 14 7 chr10 34030832 34031129 -111558159 - AluSq SINE Alu -14 299 1 333 0 0 0 chr10 34031807 34031844 -111557444 + (CA)n Simple_repeat Simple_repeat 1 37 0 416 286 134 52 chr10 34034547 34034778 -111554510 - MIR SINE MIR -9 253 4 483 317 145 38 chr10 34037105 34037449 -111551839 + L2 LINE L2 2918 3298 -15 21 36 0 0 chr10 34037701 34037729 -111551559 + AT_rich Low_complexity Low_complexity 1 28 0 1588 168 58 3 chr10 34037822 34038113 -111551175 - AluJo SINE Alu -5 307 1 2175 107 0 22 chr10 34040991 34041310 -111547978 + AluSx SINE Alu 1 312 0 1387 279 85 9 chr10 34041402 34041965 -111547323 - L1M3 LINE L1 -1125 5021 4416 2022 126 7 7 chr10 34042026 34042327 -111546961 + AluSx SINE Alu 1 301 -11 378 0 0 0 chr10 34042328 34042370 -111546918 + (TG)n Simple_repeat Simple_repeat 2 43 0 939 145 33 0 chr10 34043225 34043377 -111545911 + FRAM SINE Alu 1 157 -9 571 245 14 0 chr10 34044888 34045031 -111544257 + MER103 DNA DNA 21 165 -1 41 0 0 0 chr10 34045280 34045321 -111543967 + AT_rich Low_complexity Low_complexity 1 41 0 898 279 84 43 chr10 34045580 34046067 -111543221 + MLT1H LTR MaLR 43 549 0 541 181 16 8 chr10 34046112 34046239 -111543049 - L1MC2 LINE L1 -2 6342 6215 234 0 0 0 chr10 34046872 34046898 -111542390 + (TA)n Simple_repeat Simple_repeat 1 26 0 529 292 92 24 chr10 34046898 34047148 -111542140 + L1MC/D LINE L1 5426 5692 -2116 647 164 185 14 chr10 34048971 34049117 -111540171 + MER20 DNA MER1_type 19 189 -30 301 269 160 17 chr10 34049263 34049382 -111539906 + L2 LINE L2 3126 3261 -11 186 71 0 0 chr10 34049382 34049410 -111539878 + (CAAA)n Simple_repeat Simple_repeat 3 30 0 21 0 0 0 chr10 34050747 34050768 -111538520 + AT_rich Low_complexity Low_complexity 1 21 0 516 257 73 90 chr10 34051640 34051885 -111537403 + MIR SINE MIR 21 261 -1 193 399 74 25 chr10 34053363 34053526 -111535762 + L2 LINE L2 3087 3257 -15 2521 58 0 6 chr10 34053669 34053980 -111535308 + AluY SINE Alu 1 309 -2 294 228 74 34 chr10 34054380 34054529 -111534759 - L1MEd LINE L1 -3866 2263 2109 826 204 65 48 chr10 34054794 34055024 -111534264 + Charlie1 DNA MER1_type 1708 1941 -820 2199 96 0 0 chr10 34055029 34055340 -111533948 + AluSx SINE Alu 1 311 0 1467 179 65 10 chr10 34055346 34055654 -111533634 + L1MB2 LINE L1 5843 6167 -4 2859 201 102 21 chr10 34055654 34056427 -111532861 + Charlie1 DNA MER1_type 1925 2760 -1 528 254 119 79 chr10 34056886 34057442 -111531846 + L1MC4a LINE L1 5296 5873 -1935 385 311 92 0 chr10 34060136 34060300 -111528988 + MIR SINE MIR 83 261 -1 705 313 30 27 chr10 34060417 34060823 -111528465 - L1M4 LINE L1 -867 5279 4873 1003 206 0 5 chr10 34060871 34061065 -111528223 - AluJo SINE Alu -20 292 100 504 285 167 39 chr10 34061175 34061799 -111527489 - L1M4 LINE L1 -1445 4701 3998 1951 166 0 0 chr10 34061833 34062135 -111527153 + AluSx SINE Alu 3 304 -8 5093 203 102 33 chr10 34062136 34063786 -111525502 - L1MDb LINE L1 -3899 2507 749 496 287 36 37 chr10 34064600 34064910 -111524378 - L1MEd LINE L1 -1033 1457 1048 2086 99 49 0 chr10 34065119 34065403 -111523885 + AluSg SINE Alu 1 298 -12 25 51 0 0 chr10 34066540 34066579 -111522709 + AT_rich Low_complexity Low_complexity 1 39 0 24 0 0 0 chr10 34067432 34067456 -111521832 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr10 34068946 34068969 -111520319 + AT_rich Low_complexity Low_complexity 1 23 0 2076 76 60 33 chr10 34069055 34069356 -111519932 - AluSp SINE Alu -4 309 1 805 147 0 0 chr10 34071175 34071291 -111517997 + FLAM_C SINE Alu 1 116 -17 365 70 18 0 chr10 34071314 34071371 -111517917 + (GGA)n Simple_repeat Simple_repeat 3 60 0 22 0 0 0 chr10 34072702 34072724 -111516564 + AT_rich Low_complexity Low_complexity 1 22 0 252 354 121 39 chr10 34072746 34073385 -111515903 + L1MEd LINE L1 134 824 -5295 405 238 78 122 chr10 34073389 34073822 -111515466 + L1MC4 LINE L1 7625 8038 -4 427 276 91 41 chr10 34073944 34074423 -111514865 + L1MEd LINE L1 1065 1608 -4702 1751 166 3 7 chr10 34074454 34074737 -111514551 + AluJo SINE Alu 1 282 -30 602 197 0 57 chr10 34074969 34075091 -111514197 + FLAM_A SINE Alu 1 115 -18 541 173 55 9 chr10 34075092 34075202 -111514086 - MER20 DNA MER1_type -88 131 17 740 276 180 43 chr10 34075273 34075872 -111513416 + HAL1 LINE L1 44 724 -1783 830 184 24 12 chr10 34075906 34076074 -111513214 + HAL1 LINE L1 1544 1713 -794 2006 101 83 0 chr10 34076326 34076604 -111512684 - AluSx SINE Alu -11 301 1 1293 174 114 23 chr10 34077331 34077595 -111511693 + AluJo SINE Alu 1 288 -24 632 282 41 12 chr10 34078432 34078602 -111510686 + MIR3 SINE MIR 28 202 -6 22 0 0 0 chr10 34078909 34078931 -111510357 + AT_rich Low_complexity Low_complexity 1 22 0 851 209 47 28 chr10 34079099 34079229 -111510059 - MER20 DNA MER1_type 0 219 82 462 18 0 0 chr10 34079229 34079284 -111510004 + (CA)n Simple_repeat Simple_repeat 1 55 0 851 209 47 28 chr10 34079284 34079368 -111509920 - MER20 DNA MER1_type -137 82 1 342 283 138 13 chr10 34080074 34080233 -111509055 + L1M4 LINE L1 3599 3777 -2369 328 257 20 0 chr10 34080307 34080408 -111508880 + L1M4 LINE L1 3890 3992 -2154 223 295 33 0 chr10 34081055 34081116 -111508172 + L2 LINE L2 3250 3312 -1 226 325 148 48 chr10 34081702 34082126 -111507162 - L2 LINE L2 -557 2757 2231 2328 74 0 10 chr10 34082126 34082425 -111506863 + AluY SINE Alu 1 296 -15 226 325 148 48 chr10 34082425 34082514 -111506774 - L2 LINE L2 -1083 2231 2152 427 310 101 12 chr10 34082826 34083084 -111506204 + L1MEc LINE L1 34 314 -6082 2156 84 3 20 chr10 34083153 34083449 -111505839 - AluSp SINE Alu -20 293 3 674 135 0 0 chr10 34083637 34083741 -111505547 - AluSg/x SINE Alu -2 307 204 551 271 152 20 chr10 34084113 34084412 -111504876 + L1ME LINE L1 5489 5780 -341 2083 103 17 10 chr10 34084450 34084741 -111504547 + AluSx SINE Alu 1 293 -19 239 138 138 35 chr10 34085075 34085133 -111504155 - MER5A DNA MER1_type -24 165 102 1660 152 67 0 chr10 34085186 34085456 -111503832 + AluJo SINE Alu 1 288 -24 1981 144 0 0 chr10 34085787 34086093 -111503195 + AluSx SINE Alu 1 306 0 2177 105 7 3 chr10 34086755 34087061 -111502227 - AluSp SINE Alu -6 307 1 24 0 0 0 chr10 34087061 34087085 -111502203 + AT_rich Low_complexity Low_complexity 1 24 0 215 352 59 73 chr10 34087446 34087733 -111501555 - L2 LINE L2 -44 3228 2946 305 355 65 0 chr10 34088575 34088699 -111500589 + L2 LINE L2 3136 3267 -5 188 328 139 34 chr10 34088740 34089366 -111499922 + L2 LINE L2 2167 2858 -456 1589 182 75 0 chr10 34089589 34089947 -111499341 - Charlie5 DNA MER1_type 0 2618 2234 534 172 40 8 chr10 34089941 34090079 -111499209 - Charlie5 DNA MER1_type -2496 116 1 * 221 366 24 24 chr10 34090092 34090174 -111499114 + L2 LINE L2 3137 3218 -54 2363 97 0 0 chr10 34091226 34091535 -111497753 + AluSx SINE Alu 3 311 -1 2687 128 103 8 chr10 34092200 34092694 -111496594 - L1MB3 LINE L1 -6 6177 5637 1881 139 33 3 chr10 34092768 34093071 -111496217 + AluSx SINE Alu 1 312 0 1421 183 103 0 chr10 34094342 34094615 -111494673 + AluJb SINE Alu 1 301 -11 493 290 112 23 chr10 34094861 34095075 -111494213 + Tigger8 DNA MER2_type 25 257 -409 1081 209 32 18 chr10 34095139 34095359 -111493929 + MER58A DNA MER1_type 2 224 0 1515 154 108 4 chr10 34095661 34095920 -111493368 + AluJb SINE Alu 1 286 -26 28 48 0 0 chr10 34096004 34096046 -111493242 + AT_rich Low_complexity Low_complexity 1 42 0 265 366 0 0 chr10 34096589 34096671 -111492617 + L2 LINE L2 3191 3272 0 761 188 8 0 chr10 34096861 34096989 -111492299 + FLAM_C SINE Alu 3 131 -12 1267 172 35 18 chr10 34097317 34097544 -111491744 + AluJb SINE Alu 1 231 -81 325 200 0 0 chr10 34097594 34097649 -111491639 - AluJb SINE Alu -89 213 159 201 74 0 0 chr10 34097681 34097708 -111491580 + (A)n Simple_repeat Simple_repeat 1 27 0 207 286 14 71 chr10 34098193 34098263 -111491025 - MIR SINE MIR -196 66 1 2461 11 0 0 chr10 34098448 34098716 -111490572 - AluYa5 SINE Alu -13 298 31 2193 125 0 6 chr10 34099065 34099376 -111489912 + AluSg SINE Alu 1 309 -1 2375 88 3 0 chr10 34099546 34099841 -111489447 + AluSp SINE Alu 1 296 -17 1843 169 0 10 chr10 34100246 34100547 -111488741 - AluJb SINE Alu -14 298 1 23 33 0 0 chr10 34100626 34100656 -111488632 + AT_rich Low_complexity Low_complexity 1 30 0 2870 154 113 92 chr10 34100705 34101488 -111487800 - Charlie1 DNA MER1_type -63 2698 1892 800 124 8 0 chr10 34101488 34101609 -111487679 - L1MA1 LINE L1 0 6302 6181 2870 154 113 92 chr10 34101609 34101715 -111487573 - Charlie1 DNA MER1_type -869 1892 1790 2175 121 0 0 chr10 34102069 34102366 -111486922 + AluSx SINE Alu 1 297 -15 1774 170 13 113 chr10 34103518 34103978 -111485310 - MLT2D LTR ERVL 0 414 1 185 259 103 35 chr10 34104090 34104148 -111485140 - L2 LINE L2 -87 3185 3124 2512 72 0 0 chr10 34104183 34104489 -111484799 - AluY SINE Alu -5 306 1 349 260 66 77 chr10 34105049 34105245 -111484043 + MLT1K LTR MaLR 395 588 0 2240 101 0 7 chr10 34105448 34105744 -111483544 - AluSx SINE Alu -18 294 1 1618 136 163 0 chr10 34106152 34106416 -111482872 - AluSx SINE Alu -5 307 1 277 245 68 30 chr10 34106644 34106754 -111482534 - MIR SINE MIR -62 146 46 5623 86 5 0 chr10 34107823 34108595 -111480693 - L1PA5 LINE L1 -4202 1944 1169 * 27488 40 8 0 chr10 34108593 34112776 -111476512 + L1PA5 LINE L1 1938 6146 -8 26 0 0 0 chr10 34112776 34112802 -111476486 + AT_rich Low_complexity Low_complexity 1 26 0 2716 244 59 61 chr10 34113296 34114376 -111474912 + L1MCb LINE L1 2 1079 -4966 1802 163 7 0 chr10 34114376 34114658 -111474630 + AluJb SINE Alu 1 284 -28 1396 187 37 0 chr10 34114677 34114995 -111474293 + L1MB8 LINE L1 5216 5543 -641 634 81 11 0 chr10 34114995 34115082 -111474206 - AluSc SINE Alu -221 88 1 1795 138 48 0 chr10 34115100 34115390 -111473898 + MER7A DNA MER2_type 1 302 -44 1286 199 65 24 chr10 34115401 34115737 -111473551 + L1MB8 LINE L1 5679 6028 -150 804 226 14 5 chr10 34115736 34115948 -111473340 + L1M4 LINE L1 4456 4669 -1477 * 299 293 155 56 chr10 34116152 34116384 -111472904 - L2 LINE L2 -190 3082 2828 257 365 88 19 chr10 34116382 34116541 -111472747 - L2 LINE L2 -640 2674 2505 * 344 318 143 16 chr10 34116602 34116698 -111472590 + L2 LINE L2 3014 3096 -217 2005 174 43 0 chr10 34116698 34117048 -111472240 + MLT1A1 LTR MaLR 1 365 0 344 318 143 16 chr10 34117048 34117209 -111472079 + L2 LINE L2 3096 3304 -9 2329 104 0 0 chr10 34117385 34117692 -111471596 + AluSg1 SINE Alu 1 307 -2 1075 165 36 64 chr10 34118240 34118489 -111470799 + L1MB5 LINE L1 5925 6166 -8 637 329 55 88 chr10 34120325 34120866 -111468422 - L2 LINE L2 0 3272 2758 1468 153 0 118 chr10 34120866 34121014 -111468274 + AluJo SINE Alu 1 88 -224 2262 118 0 3 chr10 34121014 34121318 -111467970 + AluSx SINE Alu 1 303 -9 1468 153 0 118 chr10 34121318 34121509 -111467779 + AluJo SINE Alu 88 300 -12 637 329 55 88 chr10 34121509 34121528 -111467760 - L2 LINE L2 -514 2758 2740 25 31 0 0 chr10 34121831 34121863 -111467425 + AT_rich Low_complexity Low_complexity 1 32 0 224 254 15 0 chr10 34123622 34123689 -111465599 + (TA)n Simple_repeat Simple_repeat 1 68 0 1886 165 19 80 chr10 34123829 34124254 -111465034 + MER47B DNA MER2_type 20 418 0 326 336 9 0 chr10 34126270 34126383 -111462905 + MIR SINE MIR 83 196 -66 2216 99 0 13 chr10 34126585 34126889 -111462399 - AluSg SINE Alu -10 300 1 333 0 0 0 chr10 34127313 34127350 -111461938 + (TA)n Simple_repeat Simple_repeat 1 37 0 742 148 9 0 chr10 34127350 34127465 -111461823 - FLAM_C SINE Alu -17 116 1 2105 174 47 20 chr10 34127897 34127971 -111461317 - MER65C LTR ERV1 0 461 390 306 0 0 0 chr10 34127971 34128005 -111461283 + (TA)n Simple_repeat Simple_repeat 2 35 0 2105 174 47 20 chr10 34128005 34128379 -111460909 - MER65C LTR ERV1 -71 390 1 2083 135 0 3 chr10 34128399 34128688 -111460600 - AluSx SINE Alu -24 288 1 1751 170 0 24 chr10 34129309 34129629 -111459659 - AluJo SINE Alu 0 313 1 780 250 79 29 chr10 34129887 34130203 -111459085 - L1MC4a LINE L1 -1905 5903 5572 21 57 0 0 chr10 34130239 34130274 -111459014 + AT_rich Low_complexity Low_complexity 1 35 0 399 281 25 33 chr10 34130355 34130476 -111458812 - L2 LINE L2 -4 3309 3190 340 306 96 94 chr10 34131791 34132438 -111456850 + L1M2 LINE L1 458 1105 -5744 308 314 81 78 chr10 34132395 34132656 -111456632 - L1M2 LINE L1 -5596 1253 989 * 189 0 0 0 chr10 34132656 34132677 -111456611 + (CGG)n Simple_repeat Simple_repeat 3 23 0 308 314 81 78 chr10 34132677 34132762 -111456526 - L1M2 LINE L1 -5860 989 906 21 0 0 0 chr10 34132857 34132878 -111456410 + GC_rich Low_complexity Low_complexity 1 21 0 289 251 14 0 chr10 34132888 34133038 -111456250 + (TG)n Simple_repeat Simple_repeat 1 152 0 247 158 0 0 chr10 34135065 34135103 -111454185 - MER5A DNA MER1_type -1 188 151 716 193 77 42 chr10 34135159 34135418 -111453870 - MER33 DNA MER1_type -4 320 53 341 321 102 7 chr10 34135469 34135606 -111453682 + MER5A DNA MER1_type 1 150 -39 1247 171 41 4 chr10 34135607 34135876 -111453412 + L1MC3 LINE L1 7507 7785 0 668 264 72 10 chr10 34136019 34136212 -111453076 - MIR SINE MIR 0 262 58 303 298 53 21 chr10 34136381 34136475 -111452813 - MIR SINE MIR -146 116 20 21 0 0 0 chr10 34136563 34136584 -111452704 + AT_rich Low_complexity Low_complexity 1 21 0 535 194 54 0 chr10 34136604 34136733 -111452555 + L1ME1 LINE L1 5778 5913 -253 1322 191 110 3 chr10 34136886 34137222 -111452066 - L1ME LINE L1 -379 5787 5416 636 168 24 60 chr10 34137239 34137260 -111452028 - L1MA10 LINE L1 0 6334 6314 2277 226 82 34 chr10 34137260 34138058 -111451230 - L1ME1 LINE L1 -9 6157 5322 1629 205 3 16 chr10 34138060 34138367 -111450921 - AluJo SINE Alu -9 303 1 753 188 128 15 chr10 34138375 34138641 -111450647 - L1ME1 LINE L1 -2451 3695 3400 1189 113 0 18 chr10 34138642 34138810 -111450478 + FRAM SINE Alu 1 162 -14 293 270 51 0 chr10 34138810 34138947 -111450341 - L1ME1 LINE L1 -2744 3402 3259 4167 196 52 36 chr10 34139074 34140520 -111448768 + L1MC3 LINE L1 4744 6166 20 1981 139 13 7 chr10 34140520 34140830 -111448458 + AluSx SINE Alu 1 312 0 1894 152 7 16 chr10 34140836 34141145 -111448143 + AluSx SINE Alu 1 306 -6 4167 196 52 36 chr10 34141145 34141331 -111447957 + L1MC3 LINE L1 5221 5403 -743 1100 192 105 19 chr10 34141333 34141656 -111447632 - MLT1D LTR MaLR -154 351 1 1154 218 26 54 chr10 34141656 34141980 -111447308 + L1M4 LINE L1 4675 4988 -1158 1644 209 17 0 chr10 34141980 34142272 -111447016 + AluJo SINE Alu 1 297 -15 1154 218 26 54 chr10 34142272 34142337 -111446951 + L1M4 LINE L1 4988 5053 -1093 1382 201 25 22 chr10 34142357 34142671 -111446617 + MLT2D LTR ERVL 1 315 -99 1799 165 55 0 chr10 34142671 34142998 -111446290 - MER7A DNA MER2_type -3 343 1 232 253 13 0 chr10 34143060 34143135 -111446153 + L1M4 LINE L1 5086 5161 -985 4851 161 24 30 chr10 34143139 34144227 -111445061 + L1MD1 LINE L1 5089 6175 -67 1940 153 0 3 chr10 34144227 34144514 -111444774 - AluJb SINE Alu -26 286 1 4851 161 24 30 chr10 34144514 34144582 -111444706 + L1MD1 LINE L1 6175 6242 0 243 189 19 0 chr10 34144678 34144731 -111444557 + L1ME3 LINE L1 6067 6120 -42 21 0 0 0 chr10 34144760 34144781 -111444507 + AT_rich Low_complexity Low_complexity 1 21 0 769 169 0 0 chr10 34144846 34144970 -111444318 - FLAM_A SINE Alu -7 135 12 354 348 57 16 chr10 34144994 34145241 -111444047 - L2 LINE L2 -1396 1918 1662 641 248 139 12 chr10 34145488 34145932 -111443356 + MLT1F LTR MaLR 1 542 0 371 232 136 32 chr10 34145958 34146083 -111443205 - MIR SINE MIR -117 145 8 267 319 62 57 chr10 34146099 34146309 -111442979 - L2 LINE L2 -1883 1431 1221 1760 171 10 29 chr10 34146926 34147235 -111442053 + AluJb SINE Alu 1 303 -9 1813 168 25 68 chr10 34149015 34149198 -111440090 + MLT1C LTR MaLR 1 190 -277 1903 182 0 0 chr10 34149198 34149494 -111439794 + AluJb SINE Alu 5 300 -12 1813 168 25 68 chr10 34149494 34149798 -111439490 + MLT1C LTR MaLR 190 467 0 2101 110 14 0 chr10 34150591 34150904 -111438384 - AluSx SINE Alu 0 317 1 1588 186 21 0 chr10 34150910 34151190 -111438098 - AluJb SINE Alu -26 286 1 751 254 92 25 chr10 34151190 34151517 -111437771 + L1MC4 LINE L1 7295 7643 -399 364 262 14 90 chr10 34151517 34151662 -111437626 + L2 LINE L2 2308 2441 -873 691 189 0 0 chr10 34152496 34152623 -111436665 - L1 LINE L1 -886 5260 5134 294 241 0 23 chr10 34153247 34153334 -111435954 + GA-rich Low_complexity Low_complexity 2 86 0 887 197 23 14 chr10 34153756 34153974 -111435314 - L1 LINE L1 -1000 5146 4927 4772 164 21 16 chr10 34153987 34154685 -111434603 + L1MA8 LINE L1 5255 5961 -330 2403 84 3 0 chr10 34154685 34154984 -111434304 + AluSp SINE Alu 1 300 -13 4772 164 21 16 chr10 34154984 34155282 -111434006 + L1MA8 LINE L1 5961 6256 -35 2188 100 0 0 chr10 34156206 34156495 -111432793 - AluSg SINE Alu -21 289 1 2117 123 7 3 chr10 34156708 34157009 -111432279 + AluSc SINE Alu 1 302 -7 257 75 25 0 chr10 34157418 34157458 -111431830 + L1P LINE L1 5322 5362 -794 290 218 0 0 chr10 34157458 34157513 -111431775 + Tigger5 DNA MER2_type 1 55 -2268 1379 144 9 19 chr10 34157535 34157750 -111431538 - AluJo SINE Alu -13 299 87 425 226 0 0 chr10 34157753 34157837 -111431451 + Tigger5 DNA MER2_type 2240 2323 0 297 0 0 0 chr10 34157966 34157999 -111431289 + (CA)n Simple_repeat Simple_repeat 1 33 0 3938 147 21 31 chr10 34157999 34158059 -111431229 + L1MB3 LINE L1 5435 5494 -689 1676 193 3 14 chr10 34158059 34158355 -111430933 + AluJo SINE Alu 1 293 -19 3938 147 21 31 chr10 34158355 34159038 -111430250 + L1MB3 LINE L1 5494 6171 -12 2307 83 6 13 chr10 34159148 34159461 -111429827 + AluY SINE Alu 1 311 0 2150 81 39 0 chr10 34159474 34159757 -111429531 + AluSg SINE Alu 1 294 -16 2362 88 3 0 chr10 34159808 34160114 -111429174 + AluSg SINE Alu 1 307 -3 207 0 0 0 chr10 34160303 34160326 -111428962 + (TTTTTG)n Simple_repeat Simple_repeat 3 25 0 301 260 135 0 chr10 34160332 34160436 -111428852 + L1MC/D LINE L1 5485 5602 -757 1351 220 52 67 chr10 34160443 34160632 -111428656 + L1M4 LINE L1 2720 2910 -3236 1555 157 37 33 chr10 34160632 34160931 -111428357 + AluJb SINE Alu 1 300 -12 1351 220 52 67 chr10 34160931 34161121 -111428167 + L1M4 LINE L1 2910 3101 -3045 2393 94 0 0 chr10 34161121 34161428 -111427860 + AluSg SINE Alu 1 307 -3 1351 220 52 67 chr10 34161428 34161547 -111427741 + L1M4 LINE L1 3101 3211 -2935 1743 159 40 13 chr10 34161547 34161849 -111427439 + AluJb SINE Alu 3 312 0 1351 220 52 67 chr10 34161849 34161957 -111427331 + L1M4 LINE L1 3211 3319 -2827 1115 85 0 14 chr10 34162070 34162211 -111427077 - AluSq/x SINE Alu -174 139 1 1594 158 10 59 chr10 34162919 34163223 -111426065 + AluJo SINE Alu 1 289 -23 229 242 185 70 chr10 34163243 34163311 -111425977 - MER5A DNA MER1_type -6 183 124 2043 226 66 35 chr10 34163311 34163887 -111425401 - MLT1G1 LTR MaLR 0 595 2 229 242 185 70 chr10 34163887 34163975 -111425313 - MER5A DNA MER1_type -65 124 9 2029 152 19 0 chr10 34164201 34164510 -111424778 - 7SLRNA srpRNA srpRNA -5 315 1 258 276 68 98 chr10 34164870 34165033 -111424255 - L2 LINE L2 -1 3312 3155 330 230 14 14 chr10 34165036 34165110 -111424178 + Charlie1 DNA MER1_type 7 80 -2681 * 1968 188 67 4 chr10 34165100 34165621 -111423667 + Charlie1 DNA MER1_type 2144 2697 -64 1767 52 0 4 chr10 34165673 34165904 -111423384 + LTR9 LTR ERV1 1 230 -382 419 95 0 54 chr10 34165904 34165978 -111423310 + FLAM_A SINE Alu 68 137 -5 605 226 0 16 chr10 34166636 34166760 -111422528 + L2 LINE L2 3185 3306 -7 592 288 63 54 chr10 34166778 34167125 -111422163 - L2 LINE L2 -249 3064 2710 3624 162 28 35 chr10 34167125 34167818 -111421470 + L1MB3 LINE L1 5444 6133 -50 2400 89 0 0 chr10 34167818 34168121 -111421167 + AluSx SINE Alu 7 309 -3 3624 162 28 35 chr10 34168121 34168169 -111421119 + L1MB3 LINE L1 6133 6180 -3 592 288 63 54 chr10 34168169 34168234 -111421054 - L2 LINE L2 -603 2710 2647 2021 151 3 0 chr10 34168431 34168730 -111420558 + AluJb SINE Alu 1 300 -12 1008 194 131 33 chr10 34168791 34169029 -111420259 + Charlie1 DNA MER1_type 2350 2630 -131 2246 121 0 3 chr10 34169029 34169336 -111419952 - AluSg SINE Alu -4 306 1 1008 194 131 33 chr10 34169336 34169426 -111419862 + Charlie1 DNA MER1_type 2630 2710 -51 754 149 91 26 chr10 34169432 34169586 -111419702 - FRAM SINE Alu -21 155 1 441 206 19 0 chr10 34169636 34169743 -111419545 + MLT1L LTR MaLR 165 273 -342 374 249 17 83 chr10 34169903 34170023 -111419265 - L1ME LINE L1 -417 5704 5598 2369 92 0 0 chr10 34170023 34170317 -111418971 + AluSp SINE Alu 1 294 -19 374 249 17 83 chr10 34170317 34170377 -111418911 - L1ME LINE L1 -523 5598 5536 232 206 0 73 chr10 34170384 34170452 -111418836 - MIR SINE MIR -5 257 195 434 295 176 4 chr10 34170453 34170697 -111418591 - L1ME LINE L1 -2269 5539 5254 562 265 133 27 chr10 34170732 34171026 -111418262 + MER46C DNA MER2_type 8 332 -6 473 256 6 44 chr10 34171058 34171218 -111418070 - L2 LINE L2 -956 2358 2205 2167 119 7 0 chr10 34172599 34172909 -111416379 + AluSx SINE Alu 1 312 0 273 128 0 0 chr10 34172909 34172948 -111416340 + MER50-int LTR ERV1 4315 4353 -3184 1379 110 0 6 chr10 34172949 34173131 -111416157 + AluSc SINE Alu 40 220 -89 670 97 97 0 chr10 34173173 34173276 -111416012 + AluSg/x SINE Alu 197 309 -3 2190 104 0 13 chr10 34173276 34173575 -111415713 + AluSg SINE Alu 1 295 -15 3734 129 32 32 chr10 34173575 34173746 -111415542 + MER50-int LTR ERV1 4612 4782 -1481 2349 119 0 0 chr10 34173746 34174056 -111415232 + AluSq SINE Alu 1 310 -3 3734 129 32 32 chr10 34174056 34174510 -111414778 + MER50-int LTR ERV1 4782 5192 -1071 1813 177 138 26 chr10 34174510 34174895 -111414393 - MSTA LTR MaLR 0 428 1 1339 152 18 13 chr10 34174937 34175161 -111414127 + AluSg/x SINE Alu 78 302 -10 9650 126 12 37 chr10 34175161 34176731 -111412557 - MSTA-int LTR MaLR -47 1533 3 1644 151 176 22 chr10 34176737 34177101 -111412187 - MSTA LTR MaLR -8 420 1 6153 121 9 30 chr10 34177102 34178085 -111411203 + MER50-int LTR ERV1 5243 6205 -1000 2652 85 17 3 chr10 34178079 34178432 -111410856 + MER50-int LTR ERV1 6840 7197 -8 * 3931 145 87 5 chr10 34178432 34179089 -111410199 + MER50 LTR ERV1 1 711 -23 1049 276 138 33 chr10 34179116 34179878 -111409410 - L1MEc LINE L1 -4718 1678 837 1043 209 43 8 chr10 34179873 34180107 -111409181 - L1MEc LINE L1 -6133 263 22 * 633 242 138 41 chr10 34180299 34180455 -111408833 - L1MC4 LINE L1 0 8042 7903 2264 92 0 7 chr10 34180455 34180750 -111408538 + AluSp SINE Alu 1 293 -20 633 242 138 41 chr10 34180750 34180950 -111408338 - L1MC4 LINE L1 -139 7903 7642 2432 59 0 16 chr10 34180950 34181257 -111408031 + AluY SINE Alu 1 302 -9 633 242 138 41 chr10 34181257 34181291 -111407997 - L1MC4 LINE L1 -400 7642 7613 654 222 5 7 chr10 34181311 34181516 -111407772 + MLT1A1 LTR MaLR 5 259 -106 886 157 0 63 chr10 34181538 34181697 -111407591 - FRAM SINE Alu -18 158 10 748 148 0 0 chr10 34181708 34181823 -111407465 + MLT1A1 LTR MaLR 245 359 -6 2338 100 0 13 chr10 34181838 34182148 -111407140 - AluSx SINE Alu -6 306 1 234 245 0 0 chr10 34182154 34182207 -111407081 - L1MC4 LINE L1 -444 7598 7546 28 48 0 0 chr10 34182216 34182258 -111407030 + AT_rich Low_complexity Low_complexity 1 42 0 809 200 0 0 chr10 34182258 34182383 -111406905 - FLAM_C SINE Alu -17 126 2 1809 150 37 10 chr10 34182712 34183006 -111406282 + AluJb SINE Alu 1 302 -10 1589 139 6 104 chr10 34184076 34184421 -111404867 + AluJb SINE Alu 1 311 -1 1643 98 5 0 chr10 34184422 34184636 -111404652 + AluSp SINE Alu 96 310 -3 2328 93 0 7 chr10 34185026 34185328 -111403960 + AluSp SINE Alu 1 300 -13 892 278 92 44 chr10 34185425 34185998 -111403290 - L1ME4a LINE L1 -220 5901 5301 916 133 0 22 chr10 34186537 34186672 -111402616 + FLAM_C SINE Alu 1 132 -1 644 184 64 0 chr10 34186811 34186936 -111402352 + FLAM_C SINE Alu 1 133 0 256 211 113 0 chr10 34186972 34187043 -111402245 + MIR SINE MIR 90 168 -94 406 269 20 67 chr10 34187189 34187338 -111401950 - MIR3 SINE MIR -7 201 60 965 88 0 22 chr10 34187556 34187692 -111401596 + AluSg/x SINE Alu 170 302 -10 1812 156 11 11 chr10 34187726 34188008 -111401280 - AluSx SINE Alu -21 291 10 544 287 32 6 chr10 34188046 34188203 -111401085 + MER34 LTR ERV1 97 257 -285 1721 129 129 4 chr10 34188203 34188328 -111400960 + AluSx SINE Alu 2 110 -202 216 0 0 0 chr10 34188328 34188352 -111400936 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1721 129 129 4 chr10 34188352 34188498 -111400790 + AluSx SINE Alu 110 307 -5 921 134 0 107 chr10 34188498 34188685 -111400603 + AluJb SINE Alu 137 303 -9 608 225 66 11 chr10 34188774 34188835 -111400453 + MER31-int LTR ERV1 1561 1617 -3254 1673 162 17 30 chr10 34188835 34189132 -111400156 + AluJb SINE Alu 1 293 -19 608 225 66 11 chr10 34189132 34189252 -111400036 + MER31-int LTR ERV1 1617 1752 -3119 1078 164 61 23 chr10 34189255 34189469 -111399819 + AluJo SINE Alu 85 306 -6 963 180 28 92 chr10 34189479 34189951 -111399337 + MER31-int LTR ERV1 1117 2104 -2767 470 207 39 101 chr10 34190016 34190224 -111399064 + MER31-int LTR ERV1 3548 3742 -2856 578 179 20 139 chr10 34190278 34190411 -111398877 + MER31-int LTR ERV1 3731 3822 -2776 1881 130 49 36 chr10 34190411 34190450 -111398838 - AluSx SINE Alu 0 312 275 213 39 0 0 chr10 34190450 34190476 -111398812 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 1881 130 49 36 chr10 34190476 34190744 -111398544 - AluSx SINE Alu -37 275 1 578 179 20 139 chr10 34190744 34190861 -111398427 + MER31-int LTR ERV1 3822 3951 -2647 2364 73 13 19 chr10 34190943 34191256 -111398032 - AluY SINE Alu 0 311 1 2290 99 17 0 chr10 34191258 34191550 -111397738 - AluSx SINE Alu -15 297 1 1782 179 3 3 chr10 34191552 34191848 -111397440 - AluJb SINE Alu -16 296 1 488 262 33 22 chr10 34191848 34192031 -111397257 + MER31-int LTR ERV1 2637 2821 -2115 421 209 96 17 chr10 34192034 34192149 -111397139 + MER65C LTR ERV1 338 461 0 431 248 22 44 chr10 34192473 34192610 -111396678 + L1ME4a LINE L1 4007 4140 -2006 387 197 102 22 chr10 34192928 34193065 -111396223 + LTR33 LTR ERVL 374 521 0 2106 120 3 3 chr10 34194686 34194986 -111394302 + AluSp SINE Alu 14 313 0 1844 164 13 0 chr10 34195008 34195306 -111393982 + AluSx SINE Alu 1 302 -10 862 139 0 36 chr10 34195633 34195770 -111393518 + FLAM_C SINE Alu 2 133 0 2208 93 0 14 chr10 34196346 34196636 -111392652 - AluSq SINE Alu -15 298 13 406 269 20 67 chr10 34196786 34196935 -111392353 + MIR3 SINE MIR 60 201 -7 256 211 113 0 chr10 34197081 34197152 -111392136 - MIR SINE MIR -94 168 90 644 184 64 0 chr10 34197188 34197313 -111391975 - FLAM_C SINE Alu 0 133 1 916 133 0 22 chr10 34197452 34197587 -111391701 - FLAM_C SINE Alu -1 132 1 892 278 92 44 chr10 34198126 34198699 -111390589 + L1ME4a LINE L1 5301 5901 -220 2315 96 0 7 chr10 34198796 34199098 -111390190 - AluSp SINE Alu -13 300 1 1654 98 5 0 chr10 34199485 34199700 -111389588 - AluSp SINE Alu -3 310 95 1603 136 6 104 chr10 34199700 34200045 -111389243 - AluJb SINE Alu -1 311 1 1809 150 37 10 chr10 34201115 34201409 -111387879 - AluJb SINE Alu -10 302 1 809 200 0 0 chr10 34201738 34201863 -111387425 + FLAM_C SINE Alu 2 126 -17 28 48 0 0 chr10 34201863 34201905 -111387383 + AT_rich Low_complexity Low_complexity 1 42 0 234 245 0 0 chr10 34201914 34201967 -111387321 + L1MC4 LINE L1 7546 7598 -444 2234 106 0 13 chr10 34201973 34202274 -111387014 + AluSx SINE Alu 1 297 -15 654 191 0 0 chr10 34202289 34202404 -111386884 - MLT1A1 LTR MaLR -6 359 245 876 163 0 62 chr10 34202414 34202574 -111386714 + FRAM SINE Alu 9 158 -18 654 222 5 7 chr10 34202596 34202801 -111386487 - MLT1A1 LTR MaLR -106 259 5 633 242 138 41 chr10 34202821 34202855 -111386433 + L1MC4 LINE L1 7613 7642 -400 2432 59 0 16 chr10 34202855 34203162 -111386126 - AluY SINE Alu -9 302 1 633 242 138 41 chr10 34203162 34203362 -111385926 + L1MC4 LINE L1 7642 7821 -221 2249 95 0 7 chr10 34203362 34203657 -111385631 - AluSp SINE Alu -20 293 1 633 242 138 41 chr10 34203657 34203813 -111385475 + L1MC4 LINE L1 7821 8042 0 1043 209 43 8 chr10 34204005 34204239 -111385049 + L1MEc LINE L1 22 263 -6133 * 1049 276 138 33 chr10 34204234 34204996 -111384292 + L1MEc LINE L1 837 1678 -4718 3942 143 87 5 chr10 34205023 34205680 -111383608 - MER50 LTR ERV1 -23 711 1 2652 85 17 3 chr10 34205680 34206033 -111383255 - MER50-int LTR ERV1 -8 7197 6840 * 6168 120 9 30 chr10 34206027 34207010 -111382278 - MER50-int LTR ERV1 -1000 6205 5243 1665 148 176 22 chr10 34207011 34207375 -111381913 + MSTA LTR MaLR 1 420 -8 9585 128 12 37 chr10 34207381 34208951 -111380337 + MSTA-int LTR MaLR 3 1533 -47 1339 152 18 13 chr10 34208951 34209175 -111380113 - AluSg/x SINE Alu -10 300 76 1813 177 138 26 chr10 34209217 34209602 -111379686 + MSTA LTR MaLR 1 428 0 3698 132 32 32 chr10 34209602 34210056 -111379232 - MER50-int LTR ERV1 -1071 5223 4782 2349 119 0 0 chr10 34210056 34210366 -111378922 - AluSq SINE Alu -3 310 1 3698 132 32 32 chr10 34210366 34210537 -111378751 - MER50-int LTR ERV1 -1512 4782 4612 2190 104 0 13 chr10 34210537 34210836 -111378452 - AluSg SINE Alu -15 295 1 670 97 97 0 chr10 34210836 34210939 -111378349 - AluSg/x SINE Alu -3 309 197 1411 104 0 6 chr10 34210981 34211163 -111378125 - AluSc SINE Alu -89 220 40 1604 156 19 13 chr10 34211164 34211216 -111378072 - MER50-int LTR ERV1 -1642 3656 3606 2108 136 0 0 chr10 34211216 34211511 -111377777 - AluSx SINE Alu -12 300 6 1604 156 19 13 chr10 34211511 34211761 -111377527 - MER50-int LTR ERV1 -1692 3606 2921 1038 98 8 0 chr10 34211761 34211893 -111377395 - AluSq/x SINE Alu -180 133 1 3413 129 18 20 chr10 34211893 34212539 -111376749 - MER50-int LTR ERV1 -804 4076 3391 2838 138 62 4 chr10 34212539 34212990 -111376298 - MER50-int LTR ERV1 -3399 1481 1005 6363 142 41 11 chr10 34213088 34213835 -111375453 - MER50-int LTR ERV1 -5355 1850 1126 2266 93 0 0 chr10 34213835 34214143 -111375145 - AluSg SINE Alu 0 308 1 6363 142 41 11 chr10 34214143 34215072 -111374216 - MER50-int LTR ERV1 -6079 1126 1 4372 133 21 29 chr10 34215155 34215226 -111374062 - MER50 LTR ERV1 -23 711 641 2350 112 0 0 chr10 34215226 34215531 -111373757 - AluSx SINE Alu -7 305 1 4372 133 21 29 chr10 34215531 34216176 -111373112 - MER50 LTR ERV1 -93 641 1 8101 161 35 1 chr10 34216185 34217492 -111371796 + L1M1 LINE L1 967 2318 -5247 1849 135 4 0 chr10 34217492 34217759 -111371529 + AluSx SINE Alu 1 268 -44 934 215 99 0 chr10 34217977 34218200 -111371088 + MIR SINE MIR 18 262 0 1674 181 10 24 chr10 34218330 34218622 -111370666 + AluJo SINE Alu 1 288 -24 2482 55 3 0 chr10 34218663 34218953 -111370335 + AluY SINE Alu 3 293 -18 746 142 67 8 chr10 34219190 34219310 -111369978 + FLAM_A SINE Alu 1 127 -6 660 286 16 5 chr10 34219321 34219513 -111369775 - MIR SINE MIR -10 252 59 1894 158 17 0 chr10 34219835 34220127 -111369161 - AluJb SINE Alu -15 297 1 378 0 0 0 chr10 34220247 34220289 -111368999 + (TG)n Simple_repeat Simple_repeat 2 43 0 354 180 0 155 chr10 34220291 34220358 -111368930 + MER20 DNA MER1_type 7 83 -136 1879 152 0 17 chr10 34220358 34220654 -111368634 - AluJb SINE Alu -21 291 1 354 180 0 155 chr10 34220654 34220754 -111368534 + MER20 DNA MER1_type 83 219 0 317 222 189 22 chr10 34220926 34221016 -111368272 - L2 LINE L2 -10 3303 3199 1850 137 7 31 chr10 34221063 34221355 -111367933 + AluSx SINE Alu 1 285 -27 414 0 0 0 chr10 34221361 34221407 -111367881 + (TAGA)n Simple_repeat Simple_repeat 1 46 0 239 104 83 0 chr10 34221415 34221463 -111367825 - LTR66 LTR ERVL -172 438 387 180 0 0 0 chr10 34222282 34222302 -111366986 + (CA)n Simple_repeat Simple_repeat 1 20 0 443 107 0 0 chr10 34222508 34222564 -111366724 + AluJ/FLAM SINE Alu 2 57 -255 2850 125 46 16 chr10 34222719 34223151 -111366137 - MER83 LTR ERV1 0 448 4 1684 157 7 11 chr10 34223151 34223431 -111365857 - AluJo SINE Alu -33 279 1 1154 146 0 0 chr10 34223521 34223685 -111365603 - AluSg/x SINE Alu -14 298 135 1050 189 0 0 chr10 34224082 34224246 -111365042 - FRAM SINE Alu -2 164 1 724 137 21 132 chr10 34224367 34224419 -111364869 + L1MA5A LINE L1 6126 6182 -115 2084 107 7 3 chr10 34224419 34224709 -111364579 + AluSq SINE Alu 1 291 -22 1615 151 75 0 chr10 34224713 34224826 -111364462 + AluJo SINE Alu 1 104 -208 378 42 0 0 chr10 34224826 34224874 -111364414 + (CA)n Simple_repeat Simple_repeat 1 48 0 1615 151 75 0 chr10 34224874 34225038 -111364250 + AluJo SINE Alu 104 299 -13 724 137 21 132 chr10 34225038 34225170 -111364118 + L1MA5A LINE L1 6185 6294 -3 2478 222 140 25 chr10 34225437 34226338 -111362950 + L1MEc LINE L1 36 1102 -5294 1697 179 0 3 chr10 34226338 34226628 -111362660 + AluJo SINE Alu 23 311 -1 2478 222 140 25 chr10 34226628 34226805 -111362483 + L1MEc LINE L1 1102 1257 -5139 2077 141 7 0 chr10 34227021 34227327 -111361961 + AluSx SINE Alu 1 308 -4 381 361 115 0 chr10 34227488 34227837 -111361451 - L2 LINE L2 -962 2352 1964 1736 174 4 4 chr10 34228672 34228953 -111360335 + AluJb SINE Alu 1 281 -31 5212 78 32 7 chr10 34228970 34229687 -111359601 - SVA Other Other -2 1384 650 450 136 0 0 chr10 34229694 34229760 -111359528 + Alu SINE Alu 235 300 -12 233 204 93 0 chr10 34230045 34230099 -111359189 - MLT1K LTR MaLR 0 588 530 1299 184 0 84 chr10 34230101 34230400 -111358888 + AluJb SINE Alu 1 274 -38 731 69 15 31 chr10 34230401 34230531 -111358757 + (TAGA)n Simple_repeat Simple_repeat 3 130 0 1224 228 73 93 chr10 34230569 34230644 -111358644 + MLT1F LTR MaLR 1 76 -466 3680 100 31 4 chr10 34230644 34231166 -111358122 - L1PA14 LINE L1 -2 6159 5624 1224 228 73 93 chr10 34231166 34231582 -111357706 + MLT1F LTR MaLR 76 482 -60 1890 144 0 7 chr10 34231592 34231876 -111357412 - AluJo SINE Alu -30 282 1 2505 68 0 0 chr10 34232068 34232364 -111356924 + AluY SINE Alu 2 297 -14 2645 43 0 0 chr10 34232919 34233220 -111356068 + AluY SINE Alu 1 301 -10 1736 153 14 14 chr10 34234265 34234581 -111354707 + AluJb SINE Alu 1 316 0 2302 100 0 0 chr10 34234877 34235168 -111354120 - AluY SINE Alu -20 291 1 771 146 9 0 chr10 34235364 34235474 -111353814 + FLAM_C SINE Alu 23 133 -10 591 238 0 8 chr10 34235706 34235828 -111353460 - L2 LINE L2 0 3313 3193 482 246 129 69 chr10 34235891 34235986 -111353302 + L1ME LINE L1 5420 5508 -613 1872 153 7 13 chr10 34235986 34236293 -111352995 - AluJb SINE Alu -5 307 3 482 246 129 69 chr10 34236293 34236429 -111352859 + L1ME LINE L1 5508 5665 -456 218 276 11 69 chr10 34236474 34236561 -111352727 + MIR SINE MIR 21 102 -160 605 273 24 18 chr10 34236573 34236738 -111352550 + MIR SINE MIR 81 246 -16 1526 163 37 41 chr10 34236945 34237239 -111352049 + AluJb SINE Alu 3 295 -17 6934 70 29 11 chr10 34237277 34238961 -111350327 + L1PA10 LINE L1 4429 6168 0 2371 103 0 0 chr10 34238967 34239277 -111350011 + AluSx SINE Alu 1 310 -2 343 282 32 8 chr10 34239702 34239826 -111349462 + LTR67 LTR ERVL 429 555 -2 2241 112 0 7 chr10 34240092 34240397 -111348891 - AluSx SINE Alu -9 303 1 1575 158 10 59 chr10 34241105 34241409 -111347879 + AluJo SINE Alu 1 289 -23 233 242 185 70 chr10 34241429 34241497 -111347791 - MER5A DNA MER1_type -6 183 124 2292 224 66 35 chr10 34241497 34242073 -111347215 - MLT1G1 LTR MaLR 0 595 2 233 242 185 70 chr10 34242073 34242161 -111347127 - MER5A DNA MER1_type -65 124 9 2016 154 19 0 chr10 34242387 34242699 -111346589 - 7SLRNA srpRNA srpRNA -2 318 1 250 276 68 98 chr10 34243058 34243221 -111346067 - L2 LINE L2 -1 3312 3155 356 230 14 14 chr10 34243224 34243298 -111345990 + Charlie1 DNA MER1_type 7 80 -2681 * 2210 189 74 4 chr10 34243280 34243809 -111345479 + Charlie1 DNA MER1_type 2132 2697 -64 1877 56 0 4 chr10 34243861 34244092 -111345196 + LTR9 LTR ERV1 1 230 -382 464 92 0 53 chr10 34244092 34244168 -111345120 + FLAM_A SINE Alu 68 139 -3 606 226 0 16 chr10 34244827 34244951 -111344337 + L2 LINE L2 3185 3306 -7 590 287 69 53 chr10 34244985 34245316 -111343972 - L2 LINE L2 -253 3060 2709 4002 160 28 35 chr10 34245316 34246009 -111343279 + L1MB3 LINE L1 5444 6133 -50 2408 89 0 0 chr10 34246009 34246312 -111342976 + AluSx SINE Alu 7 309 -3 4002 160 28 35 chr10 34246312 34246360 -111342928 + L1MB3 LINE L1 6133 6180 -3 590 287 69 53 chr10 34246360 34246425 -111342863 - L2 LINE L2 -604 2709 2647 2011 151 3 0 chr10 34246622 34246921 -111342367 + AluJb SINE Alu 1 300 -12 1189 192 129 33 chr10 34246978 34247220 -111342068 + Charlie1 DNA MER1_type 2346 2630 -131 2242 121 0 3 chr10 34247220 34247527 -111341761 - AluSg SINE Alu -4 306 1 1189 192 129 33 chr10 34247527 34247617 -111341671 + Charlie1 DNA MER1_type 2630 2710 -51 817 149 91 26 chr10 34247623 34247777 -111341511 - FRAM SINE Alu -21 155 1 485 206 19 0 chr10 34247827 34247934 -111341354 + MLT1L LTR MaLR 165 273 -342 442 259 38 71 chr10 34248063 34248214 -111341074 - L1ME LINE L1 -381 5740 5596 2379 92 0 0 chr10 34248214 34248509 -111340779 + AluSp SINE Alu 1 295 -18 442 259 38 71 chr10 34248509 34248569 -111340719 - L1ME LINE L1 -525 5596 5536 224 206 0 73 chr10 34248576 34248644 -111340644 - MIR SINE MIR -5 257 195 434 268 100 28 chr10 34248645 34248910 -111340378 - L1ME LINE L1 -770 5376 5236 549 269 133 27 chr10 34248924 34249218 -111340070 + MER46C DNA MER2_type 8 332 -6 473 256 6 44 chr10 34249250 34249410 -111339878 - L2 LINE L2 -956 2358 2205 341 76 0 136 chr10 34250757 34250791 -111338497 + L1MB2 LINE L1 6093 6115 -56 2124 103 21 0 chr10 34250791 34251081 -111338207 + AluSx SINE Alu 1 296 -16 341 76 0 136 chr10 34251081 34251112 -111338176 + L1MB2 LINE L1 6115 6149 -22 920 191 0 0 chr10 34251112 34251259 -111338029 - AluJb SINE Alu -29 283 137 465 117 13 52 chr10 34251260 34251337 -111337951 + MER2 DNA MER2_type 272 345 0 1122 236 220 24 chr10 34251379 34251929 -111337359 - HAL1 LINE L1 -36 2471 1814 314 213 120 13 chr10 34251945 34252020 -111337268 - HAL1 LINE L1 -766 1741 1659 1757 124 4 4 chr10 34252023 34252272 -111337016 + AluSx SINE Alu 1 249 -63 485 243 167 36 chr10 34252371 34252593 -111336695 - HAL1 LINE L1 -925 1582 1332 1489 230 201 15 chr10 34252602 34253189 -111336099 - HAL1 LINE L1 -1232 1275 580 1611 101 0 9 chr10 34253209 34253427 -111335861 + AluSx SINE Alu 1 216 -96 701 136 136 71 chr10 34253428 34253568 -111335720 + AluSc SINE Alu 150 298 -11 609 251 291 22 chr10 34253568 34253939 -111335349 - HAL1 LINE L1 -839 1668 1198 1334 149 5 0 chr10 34253982 34254197 -111335091 + AluSq SINE Alu 85 300 -13 245 264 153 18 chr10 34254762 34254925 -111334363 - LTR41 LTR ERVL -542 231 47 958 173 162 108 chr10 34254925 34255203 -111334085 - MLT1C LTR MaLR 0 467 98 665 281 64 42 chr10 34255211 34255661 -111333627 + MERVL LTR ERVL 1787 2256 -2740 253 283 50 0 chr10 34255669 34255768 -111333520 + MERVL LTR ERVL 3957 4060 -1425 374 172 0 0 chr10 34256103 34256161 -111333127 + AluJ/FRAM SINE Alu 233 290 -12 1500 174 39 7 chr10 34256164 34256445 -111332843 + AluJb SINE Alu 1 290 -22 2243 90 10 3 chr10 34256459 34256760 -111332528 + AluSp SINE Alu 1 303 -10 1796 158 6 64 chr10 34256768 34257096 -111332192 + AluSx SINE Alu 1 309 -3 810 206 121 106 chr10 34257390 34257901 -111331387 + L1MC5 LINE L1 6961 7479 -482 713 201 79 98 chr10 34257970 34258080 -111331208 + L1MC5 LINE L1 7625 7736 -225 2403 57 3 35 chr10 34258080 34258394 -111330894 + AluY SINE Alu 7 310 -1 713 201 79 98 chr10 34258394 34258601 -111330687 + L1MC5 LINE L1 7736 7936 -25 2269 124 0 0 chr10 34258800 34259107 -111330181 + AluSx SINE Alu 1 307 -5 41 21 0 0 chr10 34260229 34260277 -111329011 + AT_rich Low_complexity Low_complexity 1 48 0 1854 98 0 12 chr10 34262485 34262741 -111326547 + AluSq SINE Alu 2 254 -59 2325 84 7 0 chr10 34263193 34263492 -111325796 - AluSp SINE Alu -12 301 1 276 258 167 28 chr10 34263748 34264000 -111325288 + L1MC4 LINE L1 7536 7822 -220 1138 113 12 0 chr10 34264524 34264684 -111324604 + AluSp SINE Alu 122 283 -30 204 40 0 0 chr10 34264838 34264863 -111324425 + (GA)n Simple_repeat Simple_repeat 2 26 0 471 194 83 0 chr10 34264991 34265099 -111324189 + L1ME LINE L1 5548 5664 -457 2289 98 10 7 chr10 34265133 34265440 -111323848 + AluSq SINE Alu 1 308 -5 1688 184 3 7 chr10 34266152 34266467 -111322821 + AluJb SINE Alu 1 314 0 2322 94 10 0 chr10 34266469 34266778 -111322510 + AluSp SINE Alu 1 312 -1 1862 102 24 54 chr10 34266811 34267128 -111322160 - AluSx SINE Alu 0 308 1 24 0 0 0 chr10 34269014 34269038 -111320250 + AT_rich Low_complexity Low_complexity 1 24 0 1185 180 27 9 chr10 34269060 34269282 -111320006 - AluJb SINE Alu -78 234 9 22 0 0 0 chr10 34269408 34269430 -111319858 + AT_rich Low_complexity Low_complexity 1 22 0 1508 163 39 25 chr10 34270738 34271020 -111318268 - AluJo SINE Alu -26 286 1 1899 145 0 3 chr10 34271990 34272287 -111317001 + AluY SINE Alu 4 299 -12 22 35 0 0 chr10 34273400 34273429 -111315859 + AT_rich Low_complexity Low_complexity 1 29 0 1674 225 77 31 chr10 34273824 34274437 -111314851 + L1MC3 LINE L1 4629 5274 -872 2820 10 0 0 chr10 34274437 34274742 -111314546 - AluYa5 SINE Alu -6 305 1 1674 225 77 31 chr10 34274742 34274767 -111314521 + L1MC3 LINE L1 5274 5296 -850 2213 109 0 3 chr10 34274770 34275072 -111314216 + AluSx SINE Alu 1 301 -11 2184 130 0 13 chr10 34275083 34275398 -111313890 + AluSx SINE Alu 1 311 -1 2550 178 77 48 chr10 34275401 34275673 -111313615 + L1MC3 LINE L1 5417 5680 -2105 1981 158 0 0 chr10 34275673 34275964 -111313324 - AluSx SINE Alu -21 291 1 2550 178 77 48 chr10 34275964 34276382 -111312906 + L1MC3 LINE L1 5680 6127 -1658 2371 90 0 13 chr10 34276441 34276753 -111312535 + AluY SINE Alu 1 308 -3 181 195 98 0 chr10 34276906 34276947 -111312341 + MIR SINE MIR 33 77 -131 225 156 94 0 chr10 34277755 34277819 -111311469 + L1MC5 LINE L1 7868 7937 -24 1580 167 73 31 chr10 34277907 34278195 -111311093 - AluJb SINE Alu -12 300 1 1326 147 44 0 chr10 34278268 34278472 -111310816 - AluJb SINE Alu -15 297 85 192 202 128 32 chr10 34278550 34278644 -111310644 + MIR SINE MIR 110 212 -50 765 169 52 0 chr10 34279521 34279657 -111309631 + MER46A DNA MER2_type 34 176 -60 2381 74 7 0 chr10 34280527 34280825 -111308463 + AluSq SINE Alu 2 301 -12 221 257 14 95 chr10 34280830 34280904 -111308384 - L2 LINE L2 -19 3294 3227 22 0 0 0 chr10 34281097 34281119 -111308169 + AT_rich Low_complexity Low_complexity 1 22 0 282 341 109 31 chr10 34281694 34281923 -111307365 - L2 LINE L2 0 3272 3026 2339 73 7 7 chr10 34282009 34282309 -111306979 + AluSq SINE Alu 1 300 -13 2355 87 0 0 chr10 34282373 34282672 -111306616 + AluSq SINE Alu 1 299 -14 372 236 101 0 chr10 34282773 34282907 -111306381 + MER20 DNA MER1_type 46 202 -17 1779 155 56 9 chr10 34283928 34284250 -111305038 + MER1B DNA MER1_type 1 337 0 488 173 119 38 chr10 34284752 34284768 -111304520 - L1M3f LINE L1 -4097 1527 1514 2155 120 0 3 chr10 34284768 34285068 -111304220 - AluSx SINE Alu -13 299 1 488 173 119 38 chr10 34285068 34285290 -111303998 - L1M3f LINE L1 -4110 1514 1018 195 42 0 0 chr10 34286439 34286463 -111302825 + (TC)n Simple_repeat Simple_repeat 1 24 0 22 35 0 0 chr10 34287041 34287070 -111302218 + AT_rich Low_complexity Low_complexity 1 29 0 1124 126 0 0 chr10 34287083 34287242 -111302046 - AluSg/x SINE Alu -19 291 133 1397 115 5 0 chr10 34288293 34288484 -111300804 + AluSg/x SINE Alu 88 279 -33 2414 67 0 0 chr10 34288497 34288780 -111300508 + AluSg SINE Alu 13 295 -15 365 258 44 88 chr10 34289063 34289222 -111300066 - MIR3 SINE MIR -34 174 23 198 220 286 0 chr10 34289538 34289629 -111299659 - L2 LINE L2 -22 3291 3175 360 0 0 0 chr10 34291282 34291322 -111297966 + (CA)n Simple_repeat Simple_repeat 2 41 0 2206 96 17 3 chr10 34291377 34291670 -111297618 + AluSg SINE Alu 1 297 -13 1021 138 0 0 chr10 34291683 34291828 -111297460 + AluSg/x SINE Alu 156 300 -12 1301 167 38 52 chr10 34292307 34292594 -111296694 - AluJo SINE Alu -29 283 1 218 231 58 0 chr10 34293234 34293286 -111296002 + L2 LINE L2 3210 3264 -8 943 208 47 63 chr10 34293562 34293658 -111295630 - MIR SINE MIR -7 255 159 2213 84 3 52 chr10 34293658 34293967 -111295321 - AluSx SINE Alu -18 294 1 943 208 47 63 chr10 34293967 34294125 -111295163 - MIR SINE MIR -103 159 5 2242 88 0 23 chr10 34295052 34295359 -111293929 + AluSp SINE Alu 2 301 -12 577 231 15 15 chr10 34295420 34295550 -111293738 - MIR SINE MIR -118 144 15 414 347 164 45 chr10 34296334 34297000 -111292288 + L3 LINE CR1 325 1069 -508 601 259 33 61 chr10 34297024 34297236 -111292052 + L2 LINE L2 556 761 -2553 853 127 14 42 chr10 34297237 34297379 -111291909 - FLAM_C SINE Alu -5 138 1 1179 259 267 16 chr10 34297393 34297476 -111291812 + L2 LINE L2 772 833 -2481 2132 146 14 27 chr10 34297476 34297846 -111291442 - MER47A DNA MER2_type -1 365 1 1179 259 267 16 chr10 34297846 34298406 -111290882 + L2 LINE L2 833 1577 -1737 308 343 35 21 chr10 34298404 34298547 -111290741 + L3 LINE CR1 1327 1471 -106 * 234 258 106 0 chr10 34299379 34299445 -111289843 + L2 LINE L2 3187 3259 -54 1473 144 156 4 chr10 34299534 34299790 -111289498 - AluJb SINE Alu -7 295 1 182 310 224 0 chr10 34299808 34299924 -111289364 - L2 LINE L2 0 3313 3172 323 237 175 0 chr10 34300246 34300360 -111288928 - Charlie1a DNA MER1_type -1320 135 2 290 235 126 34 chr10 34300365 34300484 -111288804 - L2 LINE L2 -1235 2079 1950 316 219 288 19 chr10 34301123 34301328 -111287960 + MLT1L LTR MaLR 354 613 -2 1378 117 0 0 chr10 34301839 34302019 -111287269 - AluSx SINE Alu -132 180 1 2288 83 3 29 chr10 34304102 34304416 -111284872 + AluSq SINE Alu 1 306 -7 198 71 0 0 chr10 34306180 34306208 -111283080 + (CA)n Simple_repeat Simple_repeat 1 28 0 189 0 0 0 chr10 34306860 34306881 -111282407 + (CGG)n Simple_repeat Simple_repeat 2 22 0 472 141 87 0 chr10 34307405 34307497 -111281791 + HY3 scRNA scRNA 1 100 -1 188 290 43 65 chr10 34308097 34308168 -111281120 + MIR3 SINE MIR 103 173 -35 2734 198 54 14 chr10 34308168 34308660 -111280628 - LTR65 LTR ERV1 0 669 143 1887 141 36 20 chr10 34308660 34308965 -111280323 + AluJo SINE Alu 1 310 -2 2734 198 54 14 chr10 34308965 34309115 -111280173 - LTR65 LTR ERV1 -526 143 1 188 290 43 65 chr10 34309115 34309136 -111280152 + MIR3 SINE MIR 173 193 -15 2623 188 28 17 chr10 34309414 34309951 -111279337 - MER67A LTR ERV1 0 543 1 614 308 84 15 chr10 34309969 34310242 -111279046 - MER102b DNA MER1_type -49 292 1 197 329 118 40 chr10 34310324 34310628 -111278660 + L2 LINE L2 2243 2570 -744 1930 165 0 3 chr10 34310898 34311207 -111278081 + AluSx SINE Alu 1 308 -4 2417 93 0 0 chr10 34311626 34311928 -111277360 + AluSq SINE Alu 1 302 -11 1993 222 43 17 chr10 34311989 34312457 -111276831 + MLT1H1 LTR MaLR 66 545 -10 21 0 0 0 chr10 34312552 34312573 -111276715 + AT_rich Low_complexity Low_complexity 1 21 0 291 309 21 11 chr10 34312871 34312965 -111276323 - L2 LINE L2 -7 3306 3212 216 0 0 0 chr10 34313385 34313409 -111275879 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 2215 110 3 0 chr10 34313413 34313705 -111275583 - AluSx SINE Alu -19 293 1 770 188 0 16 chr10 34313708 34313836 -111275452 - FLAM_A SINE Alu -7 126 1 1114 216 120 22 chr10 34313872 34314380 -111274908 - HAL1 LINE L1 -6 2501 1944 249 124 361 10 chr10 34314372 34314469 -111274819 - HAL1 LINE L1 -950 1557 1427 * 265 182 11 23 chr10 34314482 34314570 -111274718 - HAL1 LINE L1 -1320 1187 1101 315 0 0 0 chr10 34314574 34314609 -111274679 + (TG)n Simple_repeat Simple_repeat 2 36 0 1800 183 0 10 chr10 34314636 34314936 -111274352 + AluJb SINE Alu 1 297 -15 360 0 0 0 chr10 34314969 34315009 -111274279 + (TG)n Simple_repeat Simple_repeat 2 41 0 2149 112 3 0 chr10 34315109 34315396 -111273892 - AluSp SINE Alu -24 289 2 317 323 39 35 chr10 34315396 34315628 -111273660 - HAL1 LINE L1 -1569 938 706 2205 132 0 3 chr10 34315628 34315939 -111273349 - AluSx SINE Alu -2 310 1 3424 135 20 26 chr10 34315940 34316583 -111272705 - L1 LINE L1 -954 5192 4554 883 330 66 17 chr10 34316602 34317171 -111272117 - HAL1 LINE L1 -1817 690 84 1849 152 3 37 chr10 34317171 34317493 -111271795 - AluSx SINE Alu -1 311 1 883 330 66 17 chr10 34317493 34317572 -111271716 - HAL1 LINE L1 -2423 84 10 221 292 133 26 chr10 34317600 34317713 -111271575 + L2 LINE L2 3170 3294 -19 1947 174 0 0 chr10 34318044 34318349 -111270939 - AluJo SINE Alu -6 306 2 1065 117 0 0 chr10 34318576 34318721 -111270567 - AluSx SINE Alu 0 310 166 546 136 0 0 chr10 34318721 34318802 -111270486 - AluSx SINE Alu -232 81 1 1799 109 68 4 chr10 34318946 34319256 -111270032 - AluSg SINE Alu 0 327 1 315 227 134 17 chr10 34319378 34319497 -111269791 - LTR16A LTR ERVL -110 340 208 2256 99 16 0 chr10 34319708 34320011 -111269277 - AluSq SINE Alu -5 308 1 2450 76 3 0 chr10 34320237 34320540 -111268748 - AluSp SINE Alu -9 304 1 1777 168 7 20 chr10 34320541 34320709 -111268579 - AluJo SINE Alu -19 293 129 2373 87 3 0 chr10 34320709 34321007 -111268281 - AluSx SINE Alu -13 299 1 1777 168 7 20 chr10 34321007 34321135 -111268153 - AluJo SINE Alu -183 129 1 202 149 54 14 chr10 34324186 34324260 -111265028 + (TA)n Simple_repeat Simple_repeat 2 78 0 303 287 108 31 chr10 34324656 34324785 -111264503 - L2 LINE L2 -1 3312 3174 2229 94 0 17 chr10 34325866 34326165 -111263123 + AluSg SINE Alu 1 294 -16 234 200 0 0 chr10 34326169 34326214 -111263074 + MIR SINE MIR 218 262 0 661 186 39 16 chr10 34326322 34326451 -111262837 + FLAM_C SINE Alu 2 133 -10 1582 122 26 86 chr10 34326736 34327063 -111262225 - AluJo SINE Alu 0 309 1 2320 214 78 24 chr10 34327092 34327556 -111261732 + MER21B LTR ERV1 151 650 -213 1748 94 124 15 chr10 34327556 34327821 -111261467 + AluSg1 SINE Alu 5 298 -11 2320 214 78 24 chr10 34327821 34327897 -111261391 + MER21B LTR ERV1 650 720 -143 2201 117 0 0 chr10 34327904 34328194 -111261094 + AluSx SINE Alu 11 300 -12 428 165 0 0 chr10 34328212 34328291 -111260997 - Alu SINE Alu 0 312 234 856 118 0 8 chr10 34328293 34328412 -111260876 + FLAM_C SINE Alu 14 131 -12 2340 120 0 0 chr10 34329049 34329358 -111259930 + AluSc SINE Alu 1 309 0 1919 168 0 7 chr10 34329562 34329871 -111259417 + AluJo SINE Alu 1 307 -5 4638 183 57 37 chr10 34330343 34330395 -111258893 - Tigger6a DNA MER2_type -514 1083 1034 1982 125 14 0 chr10 34330395 34330699 -111258589 + AluSx SINE Alu 1 308 0 4638 183 57 37 chr10 34330699 34330999 -111258289 - Tigger6a DNA MER2_type -563 1034 741 2170 114 31 0 chr10 34330999 34331288 -111258000 - AluSx SINE Alu -14 298 1 4638 183 57 37 chr10 34331288 34331518 -111257770 - Tigger6a DNA MER2_type -856 741 517 2010 154 0 3 chr10 34331518 34331817 -111257471 - AluSx SINE Alu -13 299 2 4638 183 57 37 chr10 34331817 34332293 -111256995 - Tigger6a DNA MER2_type -1080 517 1 2072 121 3 3 chr10 34332957 34333254 -111256034 + AluSq SINE Alu 1 297 -16 288 149 21 0 chr10 34333392 34333439 -111255849 - MER66B LTR ERV1 -141 345 298 1481 156 0 9 chr10 34334174 34334405 -111254883 + AluJb SINE Alu 1 229 -83 2088 129 7 7 chr10 34334405 34334714 -111254574 - AluSx SINE Alu -3 309 1 496 163 0 0 chr10 34334714 34334800 -111254488 + AluJb SINE Alu 221 306 -6 911 294 96 14 chr10 34334921 34335350 -111253938 + LTR16B LTR ERVL 1 464 0 2435 103 0 0 chr10 34335537 34335839 -111253449 + AluSq SINE Alu 1 302 -11 1654 172 14 4 chr10 34335967 34336246 -111253042 - AluJo SINE Alu -26 286 5 296 318 18 18 chr10 34336303 34336413 -111252875 + MER5A DNA MER1_type 80 189 0 2148 122 7 10 chr10 34336658 34336962 -111252326 + AluSx SINE Alu 1 303 -9 586 147 0 8 chr10 34337202 34337414 -111251874 + AluJo SINE Alu 3 274 -38 13144 194 24 26 chr10 34337798 34338348 -111250940 - L1PA16 LINE L1 -3 6163 5614 2403 90 0 0 chr10 34338348 34338649 -111250639 - AluY SINE Alu -10 301 1 13144 194 24 26 chr10 34338649 34338787 -111250501 - L1PA16 LINE L1 -552 5614 5477 2366 98 0 0 chr10 34338787 34339084 -111250204 + AluSq SINE Alu 1 297 -16 13144 194 24 26 chr10 34339084 34342385 -111246903 - L1PA16 LINE L1 -689 5477 2187 2516 66 0 3 chr10 34342385 34342686 -111246602 - AluSp SINE Alu -13 300 1 13144 194 24 26 chr10 34342686 34342744 -111246544 - L1PA16 LINE L1 -3979 2187 2130 2248 110 0 0 chr10 34342786 34343076 -111246212 - AluSg SINE Alu -20 290 1 2280 83 3 29 chr10 34343078 34343391 -111245897 - AluY SINE Alu -6 305 1 2311 110 0 3 chr10 34343536 34343846 -111245442 - AluSg SINE Alu -1 309 1 213 182 136 30 chr10 34344490 34344556 -111244732 - L2 LINE L2 -2 3311 3239 402 329 167 13 chr10 34344654 34345174 -111244114 - L2 LINE L2 -211 3061 2454 773 144 29 69 chr10 34345207 34345326 -111243962 - MER96B DNA MER1_type? -10 407 296 2066 115 56 0 chr10 34345326 34345614 -111243674 + AluSg SINE Alu 1 304 -6 773 144 29 69 chr10 34345614 34345667 -111243621 - MER96B DNA MER1_type? -121 296 242 327 261 52 30 chr10 34345691 34345825 -111243463 - MIR SINE MIR -66 196 60 925 229 0 0 chr10 34346089 34346255 -111243033 + FRAM SINE Alu 1 166 0 1995 142 78 26 chr10 34346514 34346860 -111242428 + THE1B LTR MaLR 1 364 0 1747 144 0 0 chr10 34346993 34347236 -111242052 - AluSx SINE Alu -15 297 55 2141 124 40 32 chr10 34348116 34348488 -111240800 - THE1C LTR MaLR 0 375 1 11159 100 8 34 chr10 34348488 34350110 -111239178 - THE1C-int LTR MaLR 0 1580 1 2251 116 19 26 chr10 34350110 34350488 -111238800 - THE1C LTR MaLR 0 375 1 21 0 0 0 chr10 34350869 34350890 -111238398 + AT_rich Low_complexity Low_complexity 1 21 0 760 200 0 67 chr10 34351183 34351220 -111238068 + FRAM SINE Alu 1 39 -273 2726 78 19 0 chr10 34351220 34351581 -111237707 - L1PA8 LINE L1 0 6172 5805 760 200 0 67 chr10 34351581 34351723 -111237565 + FRAM SINE Alu 39 168 -8 390 308 38 11 chr10 34352361 34352546 -111236742 - L1MC4 LINE L1 -1073 6969 6780 2177 148 35 83 chr10 34353973 34354142 -111235146 - MSTB2 LTR MaLR 0 457 281 2104 135 3 10 chr10 34354142 34354453 -111234835 + AluSx SINE Alu 1 309 -3 2177 148 35 83 chr10 34354453 34354763 -111234525 - MSTB2 LTR MaLR -176 281 1 205 200 0 0 chr10 34355871 34355911 -111233377 + (TTTA)n Simple_repeat Simple_repeat 1 40 0 2066 123 24 0 chr10 34356274 34356566 -111232722 + AluSq SINE Alu 1 299 -14 337 291 61 20 chr10 34356687 34356835 -111232453 - MIR SINE MIR -50 212 59 1487 141 77 0 chr10 34356915 34357163 -111232125 + AluJb SINE Alu 1 267 -45 656 264 40 17 chr10 34357180 34357354 -111231934 + MER45A DNA AcHobo 1 178 0 337 80 0 20 chr10 34357587 34357637 -111231651 - MADE1 DNA Mariner -31 49 1 1751 174 10 13 chr10 34357754 34358052 -111231236 - AluJo SINE Alu -15 297 1 266 274 91 69 chr10 34358279 34358454 -111230834 + MER68 LTR ERV1 353 531 -31 2313 81 0 0 chr10 34358630 34358914 -111230374 + AluY SINE Alu 5 288 -23 560 288 72 46 chr10 34359173 34359508 -111229780 + L1MC4a LINE L1 5489 5740 -422 2241 106 0 10 chr10 34359508 34359810 -111229478 + AluSx SINE Alu 1 299 -13 560 288 72 46 chr10 34359810 34359832 -111229456 + L1MC4a LINE L1 5740 5760 -402 343 257 28 0 chr10 34361695 34361804 -111227484 - L1MA5 LINE L1 -443 5857 5746 * 360 283 9 0 chr10 34361802 34361915 -111227373 - L1MA5 LINE L1 -441 5859 5746 531 154 77 26 chr10 34361917 34362034 -111227254 - L1MA5A LINE L1 -440 5857 5735 2055 129 3 3 chr10 34363206 34363501 -111225787 + AluJb SINE Alu 1 295 -17 33 90 0 0 chr10 34363534 34363623 -111225665 + AT_rich Low_complexity Low_complexity 1 89 0 926 157 59 7 chr10 34364042 34364195 -111225093 - FAM SINE Alu -14 171 11 822 175 165 48 chr10 34364271 34364580 -111224708 + L1MC5 LINE L1 7582 7926 -35 2321 100 0 23 chr10 34364809 34365118 -111224170 - AluSg SINE Alu -8 302 1 180 111 0 0 chr10 34365453 34365480 -111223808 + (TTTTC)n Simple_repeat Simple_repeat 2 28 0 25 51 0 0 chr10 34365550 34365589 -111223699 + AT_rich Low_complexity Low_complexity 1 39 0 1193 57 0 6 chr10 34365903 34366062 -111223226 + (TTC)n Simple_repeat Simple_repeat 2 159 0 1445 28 0 6 chr10 34366111 34366290 -111222998 + (TTC)n Simple_repeat Simple_repeat 3 180 0 627 159 0 0 chr10 34366291 34366404 -111222884 + CT-rich Low_complexity Low_complexity 3 115 0 703 231 25 6 chr10 34366409 34366569 -111222719 - FRAM SINE Alu -8 168 6 2015 141 31 0 chr10 34367108 34367399 -111221889 + AluJb SINE Alu 1 300 -12 2168 130 3 13 chr10 34367807 34368123 -111221165 + AluSp SINE Alu 1 313 0 1672 154 41 4 chr10 34368472 34368738 -111220550 - AluJo SINE Alu -36 276 1 21 36 0 0 chr10 34368762 34368790 -111220498 + AT_rich Low_complexity Low_complexity 1 28 0 2113 121 10 0 chr10 34369120 34369409 -111219879 + AluSx SINE Alu 1 292 -20 3374 73 0 0 chr10 34369954 34370377 -111218911 + L1PA8 LINE L1 5746 6168 -4 834 161 0 7 chr10 34371102 34371239 -111218049 - AluJo SINE Alu -176 136 1 1121 140 68 110 chr10 34371315 34371579 -111217709 + LTR26B LTR ERV1 1 253 -278 978 196 12 0 chr10 34371576 34371739 -111217549 + LTR26B LTR ERV1 367 531 0 * 5144 188 45 17 chr10 34372281 34373857 -111215431 - MER52A LTR ERV1 0 1755 1 247 234 0 52 chr10 34374071 34374119 -111215169 + MLT1K LTR MaLR 513 557 -31 2405 126 27 30 chr10 34374119 34374499 -111214789 + MER57A LTR ERV1 1 381 -22 2006 161 0 0 chr10 34374499 34374809 -111214479 - AluSx SINE Alu -2 310 1 2405 126 27 30 chr10 34374809 34374832 -111214456 + MER57A LTR ERV1 381 403 0 247 234 0 52 chr10 34374832 34374860 -111214428 + MLT1K LTR MaLR 557 585 -3 2163 108 3 6 chr10 34374862 34375176 -111214112 + AluSp SINE Alu 1 313 0 1978 121 0 26 chr10 34375477 34375784 -111213504 - AluSg SINE Alu -11 299 1 1536 155 86 17 chr10 34376372 34376662 -111212626 + AluJo SINE Alu 3 312 0 716 124 0 0 chr10 34376688 34376801 -111212487 + L1MA5A LINE L1 6185 6297 0 2208 108 0 0 chr10 34376898 34377203 -111212085 + AluSg SINE Alu 1 305 -5 3313 145 97 26 chr10 34377470 34377748 -111211540 - LTR51 LTR ERV1 0 671 414 2003 122 0 10 chr10 34377748 34378072 -111211216 + AluSg SINE Alu 1 310 0 3313 145 97 26 chr10 34378072 34378419 -111210869 - LTR51 LTR ERV1 -257 414 1 2149 86 4 0 chr10 34378507 34378818 -111210470 + AluSg SINE Alu 1 312 0 1868 154 10 0 chr10 34379716 34380022 -111209266 - AluJo SINE Alu -1 311 3 1466 110 169 12 chr10 34380580 34380834 -111208454 + AluSg1 SINE Alu 1 294 -15 2437 63 0 0 chr10 34380965 34381264 -111208024 - AluY SINE Alu -12 299 1 480 212 229 0 chr10 34381780 34381950 -111207338 - MER3 DNA MER1_type 0 209 1 353 250 221 15 chr10 34381972 34382108 -111207180 + MER5A DNA MER1_type 26 189 0 2792 114 17 60 chr10 34382124 34382745 -111206543 + MER4E LTR ERV1 1 766 0 489 143 24 0 chr10 34382872 34382956 -111206332 + LTR56 LTR ERV1 1 86 -359 2337 101 116 11 chr10 34382956 34383352 -111205936 - MER61C LTR ERV1 0 434 13 1910 107 39 0 chr10 34383351 34383631 -111205657 + LTR56 LTR ERV1 81 371 -74 * 636 237 13 7 chr10 34383750 34383902 -111205386 - MIR SINE MIR -10 252 100 794 181 0 0 chr10 34383914 34384047 -111205241 + FLAM_C SINE Alu 1 133 0 596 117 53 11 chr10 34384104 34384198 -111205090 + MER4A LTR ERV1 1 98 -566 527 118 51 41 chr10 34384198 34384334 -111204954 + MER4A LTR ERV1 261 456 -208 1230 175 190 33 chr10 34384337 34384726 -111204562 - LTR7 LTR ERV1 0 450 1 3886 97 5 9 chr10 34384726 34385285 -111204003 - HERVH LTR ERV1 0 7713 7157 1635 142 0 0 chr10 34385278 34385539 -111203749 - HERVH LTR ERV1 -1697 6016 5756 * 4221 146 7 9 chr10 34385529 34386795 -111202493 - HERVH LTR ERV1 -2735 4258 3357 7906 123 4 29 chr10 34386803 34388052 -111201236 - HERVH LTR ERV1 -4899 2814 1597 397 219 11 64 chr10 34388155 34388397 -111200891 + G-rich Low_complexity Low_complexity 1 229 0 332 331 0 0 chr10 34388420 34388559 -111200729 + G-rich Low_complexity Low_complexity 1 139 0 1258 100 37 0 chr10 34388559 34388749 -111200539 + AluSp SINE Alu 109 305 -8 4767 175 53 45 chr10 34388749 34388887 -111200401 + L1MB3 LINE L1 4239 4374 -1809 2043 81 0 57 chr10 34388887 34389225 -111200063 - AluSc SINE Alu 0 321 1 4767 175 53 45 chr10 34389225 34389539 -111199749 + L1MB3 LINE L1 4374 4684 -1499 2142 109 0 0 chr10 34389539 34389832 -111199456 - AluSg SINE Alu -17 293 1 4767 175 53 45 chr10 34389832 34391326 -111197962 + L1MB3 LINE L1 4684 6183 0 27 0 0 0 chr10 34391450 34391477 -111197811 + AT_rich Low_complexity Low_complexity 1 27 0 30 0 0 0 chr10 34391511 34391541 -111197747 + AT_rich Low_complexity Low_complexity 1 30 0 1796 141 38 3 chr10 34391541 34391832 -111197456 - AluSx SINE Alu -11 301 1 581 282 11 0 chr10 34391833 34392014 -111197274 - L1M4 LINE L1 -2159 3987 3805 597 161 0 203 chr10 34393209 34393357 -111195931 - MLT1A1 LTR MaLR -210 155 53 2187 114 0 0 chr10 34393357 34393665 -111195623 - AluSx SINE Alu -4 308 1 597 161 0 203 chr10 34393665 34393708 -111195580 - MLT1A1 LTR MaLR -312 53 3 2002 117 0 19 chr10 34394270 34394577 -111194711 - AluSx SINE Alu -11 301 1 1734 131 4 7 chr10 34394652 34394927 -111194361 + AluSx SINE Alu 1 274 -38 4131 120 28 7 chr10 34395668 34396283 -111193005 + LTR9B LTR ERV1 17 644 0 676 258 56 59 chr10 34396487 34396809 -111192479 - MER68 LTR ERV1 -19 543 223 1972 104 13 29 chr10 34396873 34397180 -111192108 - AluSx SINE Alu -10 302 1 2101 113 0 3 chr10 34397859 34398152 -111191136 - AluSx SINE Alu -20 292 1 790 183 29 29 chr10 34398438 34398613 -111190675 - AluJo SINE Alu -16 296 122 1766 144 19 0 chr10 34398673 34398937 -111190351 - AluSx SINE Alu -43 269 1 839 140 15 0 chr10 34398958 34399094 -111190194 - FLAM_C SINE Alu -5 138 1 2244 105 0 0 chr10 34399530 34399835 -111189453 + AluSq SINE Alu 6 310 -3 1231 123 0 17 chr10 34399835 34400055 -111189233 + AluSg/x SINE Alu 108 324 0 2126 104 0 13 chr10 34400344 34400643 -111188645 - AluSc SINE Alu -14 295 1 1411 197 39 0 chr10 34400645 34400929 -111188359 - AluJb SINE Alu -17 295 1 2135 111 7 10 chr10 34401534 34401841 -111187447 + AluSx SINE Alu 1 306 -6 1305 216 11 22 chr10 34401966 34402244 -111187044 - MER87 LTR ERV1 -35 506 232 1134 112 47 0 chr10 34402244 34402414 -111186874 - AluSg/x SINE Alu -15 297 120 2049 114 0 52 chr10 34402619 34402944 -111186344 + AluSg SINE Alu 1 308 -2 2383 53 0 7 chr10 34403221 34403522 -111185766 + AluY SINE Alu 1 299 -12 1450 214 10 0 chr10 34403689 34403988 -111185300 - AluJo SINE Alu -10 302 1 421 262 0 39 chr10 34403989 34404092 -111185196 + L1MC4 LINE L1 6605 6703 -1339 394 248 0 59 chr10 34404018 34404103 -111185185 - L1MC4 LINE L1 -1339 6703 6623 * 1116 133 0 0 chr10 34404103 34404283 -111185005 + (TA)n Simple_repeat Simple_repeat 1 180 0 394 248 0 59 chr10 34404283 34404298 -111184990 - L1MC4 LINE L1 -1419 6623 6609 424 85 34 0 chr10 34404368 34404427 -111184861 + U7 snRNA snRNA 2 62 -1 4313 157 34 63 chr10 34404440 34404595 -111184693 + L1MB5 LINE L1 5153 5311 -863 1925 125 13 7 chr10 34404595 34404900 -111184388 + AluSx SINE Alu 1 307 -5 4313 157 34 63 chr10 34404900 34405313 -111183975 + L1MB5 LINE L1 5311 5734 -440 1358 172 94 4 chr10 34405313 34405580 -111183708 - AluSq SINE Alu -22 291 1 4313 157 34 63 chr10 34405580 34405654 -111183634 + L1MB5 LINE L1 5734 5809 -365 2018 134 0 0 chr10 34405654 34405945 -111183343 - AluSx SINE Alu -21 291 1 2261 107 0 0 chr10 34405950 34406258 -111183030 - AluSg SINE Alu -2 308 1 4313 157 34 63 chr10 34406258 34406631 -111182657 + L1MB5 LINE L1 5813 6153 -21 2080 124 0 0 chr10 34406631 34406930 -111182358 - AluSx SINE Alu -13 299 1 4313 157 34 63 chr10 34406930 34406952 -111182336 + L1MB5 LINE L1 6153 6174 0 1885 144 10 0 chr10 34407386 34407685 -111181603 + AluSx SINE Alu 1 302 -10 2126 99 0 0 chr10 34407758 34408075 -111181213 + AluSc SINE Alu 1 317 0 2095 117 3 7 chr10 34408494 34408802 -111180486 + AluSx SINE Alu 1 307 -5 1735 121 3 94 chr10 34408947 34409093 -111180195 + AluSp SINE Alu 1 102 -211 1367 172 3 98 chr10 34409093 34409418 -111179870 + AluJo SINE Alu 1 294 -18 1735 121 3 94 chr10 34409418 34409601 -111179687 + AluSp SINE Alu 102 300 -13 4150 82 16 2 chr10 34409671 34410217 -111179071 - MER41A LTR ERV1 0 554 1 382 312 40 0 chr10 34410233 34410358 -111178930 - LTR16C LTR ERVL -150 341 212 238 339 54 71 chr10 34410858 34411138 -111178150 + PABL_A LTR ERV1 72 346 -314 22 0 0 0 chr10 34411324 34411346 -111177942 + AT_rich Low_complexity Low_complexity 1 22 0 750 166 13 26 chr10 34411350 34411501 -111177787 + PABL_B LTR ERV1 519 667 0 * 948 167 39 94 chr10 34411501 34411620 -111177668 + MER87 LTR ERV1 26 127 -414 1984 144 0 0 chr10 34411620 34411932 -111177356 - AluSx SINE Alu 0 312 1 948 167 39 94 chr10 34411932 34412041 -111177247 + MER87 LTR ERV1 127 241 -300 1232 139 0 29 chr10 34412171 34412379 -111176909 + AluSg/x SINE Alu 94 295 -17 198 143 0 0 chr10 34412992 34413027 -111176261 + (CA)n Simple_repeat Simple_repeat 2 36 0 2223 96 0 0 chr10 34413358 34413650 -111175638 + AluSp SINE Alu 1 292 -21 1646 159 4 0 chr10 34413659 34413929 -111175359 + L1PB4 LINE L1 5886 6156 0 359 345 24 30 chr10 34414286 34414451 -111174837 - MER5A DNA MER1_type 0 189 26 2175 83 10 3 chr10 34414559 34414860 -111174428 - AluSp SINE Alu -10 303 1 986 120 11 66 chr10 34414888 34415071 -111174217 + FRAM SINE Alu 4 176 0 249 33 0 0 chr10 34415184 34415214 -111174074 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 592 148 0 0 chr10 34415214 34415302 -111173986 - FLAM_C SINE Alu -24 119 32 204 37 0 0 chr10 34415497 34415508 -111173780 + (A)n Simple_repeat Simple_repeat 1 11 -16 775 168 0 8 chr10 34415508 34415627 -111173661 - FLAM_C SINE Alu -15 118 1 204 37 0 0 chr10 34415627 34415642 -111173646 + (A)n Simple_repeat Simple_repeat 10 27 0 2129 110 3 0 chr10 34415659 34415951 -111173337 - AluSq SINE Alu -20 293 1 788 253 52 78 chr10 34416217 34416565 -111172723 - MLT1H LTR MaLR 0 549 211 770 154 0 29 chr10 34416670 34416806 -111172482 + FLAM_C SINE Alu 9 140 -3 2231 104 3 0 chr10 34416840 34417149 -111172139 - AluSx SINE Alu -2 310 1 2017 130 10 0 chr10 34417589 34417890 -111171398 + AluSx SINE Alu 1 304 -8 201 366 0 0 chr10 34418056 34418127 -111171161 + MIR SINE MIR 82 152 -56 249 274 114 12 chr10 34418134 34418232 -111171056 + MER5A DNA MER1_type 1 98 -80 2154 98 3 0 chr10 34418237 34418533 -111170755 + AluSp SINE Alu 2 298 -15 481 224 26 17 chr10 34418552 34418668 -111170620 - MER5B DNA MER1_type -6 172 56 842 273 4 38 chr10 34418727 34418965 -111170323 - LTR33 LTR ERVL -270 251 22 1968 132 0 0 chr10 34419252 34419570 -111169718 + AluSx SINE Alu 1 312 0 2183 96 7 0 chr10 34419624 34419917 -111169371 + AluSx SINE Alu 1 295 -17 1968 139 3 3 chr10 34419929 34420239 -111169049 + AluSx SINE Alu 3 312 0 683 184 0 64 chr10 34420240 34420381 -111168907 + FLAM_A SINE Alu 2 133 0 1890 110 4 4 chr10 34421379 34421651 -111167637 - AluSx SINE Alu -38 274 3 384 152 0 0 chr10 34421742 34421808 -111167480 + (TG)n Simple_repeat Simple_repeat 2 67 0 1830 139 7 0 chr10 34422524 34422812 -111166476 - AluJo SINE Alu -22 290 1 506 296 75 87 chr10 34423640 34423660 -111165628 - L2 LINE L2 -1 3312 3293 2026 132 3 3 chr10 34423660 34423963 -111165325 + AluSx SINE Alu 1 303 -9 2175 96 0 3 chr10 34423966 34424257 -111165031 + AluSg SINE Alu 1 290 -20 506 296 75 87 chr10 34424257 34424566 -111164722 - L2 LINE L2 -22 3291 2983 248 330 139 36 chr10 34424574 34424986 -111164302 + L2 LINE L2 1176 1649 -1665 2336 96 26 0 chr10 34424986 34425288 -111164000 + AluSx SINE Alu 1 310 -2 248 330 139 36 chr10 34425288 34425372 -111163916 + L2 LINE L2 1649 1723 -1591 391 271 102 53 chr10 34425443 34425642 -111163646 + L1ME4a LINE L1 5575 5763 -358 2194 114 0 13 chr10 34425642 34425941 -111163347 + AluSq SINE Alu 1 295 -18 391 271 102 53 chr10 34425941 34426191 -111163097 + L1ME4a LINE L1 5763 6046 -75 2144 114 0 19 chr10 34426218 34426552 -111162736 - AluSq SINE Alu 0 313 1 1594 197 0 40 chr10 34426560 34426860 -111162428 - AluJo SINE Alu -24 288 1 2275 129 0 0 chr10 34427090 34427400 -111161888 - AluSx SINE Alu -2 310 1 1842 180 0 0 chr10 34427402 34427702 -111161586 - AluJo SINE Alu -4 308 9 284 254 0 0 chr10 34427736 34427803 -111161485 + L2 LINE L2 1366 1432 -1882 230 224 0 0 chr10 34428316 34428365 -111160923 - L2 LINE L2 -221 3051 3003 6490 186 98 37 chr10 34428423 34429415 -111159873 + L1MDa LINE L1 1 931 -5609 2224 119 0 0 chr10 34429415 34429708 -111159580 + AluSq SINE Alu 1 293 -20 6490 186 98 37 chr10 34429708 34429719 -111159569 + L1MDa LINE L1 931 940 -5600 1487 197 7 22 chr10 34429719 34429993 -111159295 + AluJo SINE Alu 1 270 -42 6490 186 98 37 chr10 34429993 34431043 -111158245 + L1MDa LINE L1 940 2319 -4221 243 88 0 0 chr10 34431141 34431175 -111158113 + (CA)n Simple_repeat Simple_repeat 1 34 0 657 214 25 0 chr10 34431175 34431334 -111157954 + L1MD2 LINE L1 6195 6357 -2 189 0 0 0 chr10 34431399 34431420 -111157868 + (TA)n Simple_repeat Simple_repeat 2 22 0 2365 97 10 0 chr10 34431420 34431720 -111157568 - AluSq SINE Alu -10 303 1 304 244 73 12 chr10 34431731 34431813 -111157475 - MLT1K LTR MaLR -4 584 498 356 224 35 0 chr10 34432006 34432091 -111157197 - MLT1K LTR MaLR -340 248 161 1601 141 4 0 chr10 34432235 34432483 -111156805 - L1MB2 LINE L1 -238 5933 5685 1666 141 83 7 chr10 34432549 34432826 -111156462 + AluJb SINE Alu 9 306 -6 748 160 24 0 chr10 34433430 34433555 -111155733 + FLAM_A SINE Alu 1 128 -5 2128 118 0 29 chr10 34433556 34433688 -111155600 + AluSx SINE Alu 1 135 -177 216 0 0 0 chr10 34433688 34433712 -111155576 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 2128 118 0 29 chr10 34433712 34433892 -111155396 + AluSx SINE Alu 135 304 -8 283 275 12 0 chr10 34434167 34434247 -111155041 - MIR SINE MIR -70 192 112 1442 161 0 105 chr10 34435089 34435189 -111154099 - AluJo SINE Alu -16 296 187 2353 100 3 0 chr10 34435189 34435498 -111153790 + AluSx SINE Alu 1 310 -2 1442 161 0 105 chr10 34435498 34435701 -111153587 - AluJo SINE Alu -125 187 25 3261 134 19 6 chr10 34435849 34436387 -111152901 + L1PB4 LINE L1 5612 6156 0 1989 125 27 3 chr10 34436390 34436686 -111152602 + AluSx SINE Alu 1 303 -9 1234 151 9 9 chr10 34436698 34436916 -111152372 + L1PB4 LINE L1 5939 6156 0 319 189 81 0 chr10 34437164 34437238 -111152050 - MER53 DNA DNA -49 140 61 2063 110 7 0 chr10 34437245 34437518 -111151770 - AluSx SINE Alu -10 302 28 301 163 0 0 chr10 34437618 34437661 -111151627 - AluSx SINE Alu -260 43 1 * 331 109 0 0 chr10 34437661 34437706 -111151582 + MER53 DNA DNA 144 188 -1 484 237 8 17 chr10 34438004 34438122 -111151166 - MLT1E3 LTR MaLR -1 623 507 1659 160 14 28 chr10 34438385 34438667 -111150621 + AluJo SINE Alu 5 282 -30 404 36 0 18 chr10 34438672 34438727 -111150561 + (TAAA)n Simple_repeat Simple_repeat 2 55 0 1201 203 48 62 chr10 34438767 34439344 -111149944 + MER76 LTR ERV 2 613 -75 1775 177 7 13 chr10 34439346 34439645 -111149643 - AluJo SINE Alu -15 297 1 884 136 6 68 chr10 34439701 34439863 -111149425 - AluJo SINE Alu -160 152 1 2421 98 3 0 chr10 34439959 34440266 -111149022 + AluSp SINE Alu 1 308 -5 1363 156 60 5 chr10 34440276 34440494 -111148794 + AluJo SINE Alu 1 230 -82 429 167 95 0 chr10 34440510 34440594 -111148694 + MER76 LTR ERV 597 688 0 350 244 24 0 chr10 34440646 34440728 -111148560 - L2 LINE L2 0 3272 3189 367 302 36 84 chr10 34440850 34441045 -111148243 - MIR SINE MIR -62 146 7 1778 151 30 27 chr10 34441464 34441763 -111147525 + AluJo SINE Alu 6 305 -7 1286 188 142 0 chr10 34441768 34442029 -111147259 + AluSx SINE Alu 3 300 -12 1994 103 59 7 chr10 34442039 34442350 -111146938 + AluSx SINE Alu 11 312 0 225 301 140 32 chr10 34443183 34443276 -111146012 - L2 LINE L2 -12 3260 3158 4172 113 5 8 chr10 34443369 34443981 -111145307 + MER4B LTR ERV1 1 610 0 1676 157 0 67 chr10 34444029 34444342 -111144946 + AluJb SINE Alu 1 292 -20 1248 95 37 11 chr10 34445140 34445329 -111143959 - MER4B LTR ERV1 -18 592 399 1267 180 190 33 chr10 34445329 34445718 -111143570 + LTR7 LTR ERV1 1 450 0 1931 182 61 62 chr10 34445718 34446295 -111142993 + HERVH LTR ERV1 1 576 -7137 1733 158 17 63 chr10 34446285 34446647 -111142641 + HERVH LTR ERV1 1124 1468 -6245 * 1369 78 6 0 chr10 34446751 34446917 -111142371 - AluSp SINE Alu -146 167 1 5188 198 80 69 chr10 34446923 34447066 -111142222 - L1 LINE L1 -1903 4243 4103 2305 93 3 23 chr10 34447066 34447376 -111141912 + AluSx SINE Alu 1 304 -8 5188 198 80 69 chr10 34447376 34447598 -111141690 - L1 LINE L1 -2043 4103 3885 2130 115 0 7 chr10 34447598 34447912 -111141376 - AluSx SINE Alu 0 312 1 5188 198 80 69 chr10 34447912 34448767 -111140521 - L1 LINE L1 -2261 3885 3041 1476 102 58 0 chr10 34448767 34448972 -111140316 - AluSx SINE Alu -26 286 70 2142 127 55 73 chr10 34448972 34449467 -111139821 - LTR19A LTR ERV1 0 486 1 504 122 0 0 chr10 34449467 34449541 -111139747 - AluSx SINE Alu -238 74 1 5188 198 80 69 chr10 34449541 34449683 -111139605 - L1 LINE L1 -3105 3041 2902 2246 101 0 0 chr10 34449683 34449979 -111139309 + AluSx SINE Alu 1 296 -16 5188 198 80 69 chr10 34449979 34450182 -111139106 - L1 LINE L1 -3244 2902 2581 405 279 30 42 chr10 34450187 34450352 -111138936 - MIR SINE MIR -91 171 9 2227 121 0 0 chr10 34450353 34450660 -111138628 + AluSx SINE Alu 1 307 -5 740 155 0 0 chr10 34451035 34451151 -111138137 + FLAM_C SINE Alu 2 117 -26 279 113 0 0 chr10 34451151 34451204 -111138084 + (CTAA)n Simple_repeat Simple_repeat 4 56 0 21 0 0 0 chr10 34452400 34452421 -111136867 + AT_rich Low_complexity Low_complexity 1 21 0 1995 125 31 0 chr10 34452599 34452905 -111136383 - AluSq SINE Alu 0 315 1 1828 106 4 0 chr10 34452944 34453179 -111136109 - AluSq SINE Alu -77 236 1 2050 128 3 0 chr10 34453237 34453526 -111135762 - AluSx SINE Alu -22 290 1 512 278 45 28 chr10 34453593 34453769 -111135519 + MIR SINE MIR 6 184 -78 1801 98 12 67 chr10 34453812 34453961 -111135327 - L1MA5A LINE L1 -5 6292 6169 2261 112 3 0 chr10 34453961 34454264 -111135024 - AluY SINE Alu -7 304 1 1801 98 12 67 chr10 34454264 34454441 -111134847 - L1MA5A LINE L1 -128 6169 5984 180 216 0 0 chr10 34454448 34454485 -111134803 - MIR SINE MIR -9 253 217 234 197 92 13 chr10 34454506 34454582 -111134706 + L2 LINE L2 3108 3189 -124 665 180 72 80 chr10 34454595 34454789 -111134499 + LTR54 LTR ERV1 59 253 -257 2327 98 0 3 chr10 34454789 34455085 -111134203 - AluSx SINE Alu -17 295 1 665 180 72 80 chr10 34455085 34455268 -111134020 + LTR54 LTR ERV1 253 510 0 2151 128 0 10 chr10 34455959 34456265 -111133023 + AluSx SINE Alu 1 303 -9 406 180 108 43 chr10 34456413 34456552 -111132736 - MER103 DNA DNA -16 150 3 2343 64 3 7 chr10 34456702 34457009 -111132279 - AluY SINE Alu 0 306 1 376 250 8 42 chr10 34457672 34457792 -111131496 + L1ME4a LINE L1 5741 5856 -265 2329 72 0 23 chr10 34457864 34458168 -111131120 + AluY SINE Alu 1 297 -14 1726 158 70 15 chr10 34458483 34458825 -111130463 + MLT1A1 LTR MaLR 5 365 0 279 0 0 0 chr10 34459410 34459441 -111129847 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 8117 45 1 0 chr10 34459441 34460111 -111129177 - L1PA5 LINE L1 -8 6146 5478 2629 46 3 3 chr10 34460111 34460417 -111128871 - AluY SINE Alu -5 306 1 8117 45 1 0 chr10 34460417 34461499 -111127789 - L1PA5 LINE L1 -676 5478 4408 605 165 0 19 chr10 34461507 34461610 -111127678 - FRAM SINE Alu -13 163 63 908 183 21 5 chr10 34461610 34461796 -111127492 + MER5A DNA MER1_type 1 189 0 428 182 11 0 chr10 34462282 34462370 -111126918 + FLAM_A SINE Alu 1 89 -53 322 296 10 10 chr10 34462399 34462497 -111126791 - MER5A DNA MER1_type -83 106 9 1603 138 19 30 chr10 34462608 34462877 -111126411 + AluJo SINE Alu 1 266 -46 2368 93 3 6 chr10 34463105 34463417 -111125871 - AluSq SINE Alu -2 311 1 1758 164 0 21 chr10 34463642 34463929 -111125359 - AluJb SINE Alu -26 286 6 1608 187 0 32 chr10 34464162 34464478 -111124810 - AluJb SINE Alu -4 308 3 2173 116 3 0 chr10 34464484 34464778 -111124510 - AluSx SINE Alu -17 295 1 236 234 21 0 chr10 34465063 34465110 -111124178 - MER91A DNA MER1_type -1 195 148 1873 143 21 3 chr10 34465142 34465303 -111123985 - AluJb SINE Alu -17 295 125 195 42 0 0 chr10 34465303 34465327 -111123961 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 1873 143 21 3 chr10 34465327 34465451 -111123837 - AluJb SINE Alu -187 125 5 255 360 56 0 chr10 34465465 34465554 -111123734 - MER91A DNA MER1_type -23 173 80 2177 126 79 15 chr10 34465554 34465896 -111123392 - THE1B LTR MaLR 0 364 1 898 202 11 65 chr10 34466013 34466159 -111123129 - LTR37B LTR ERV1 -22 446 319 1512 161 115 14 chr10 34466159 34466302 -111122986 - AluJo SINE Alu -5 307 180 1934 127 67 0 chr10 34466302 34466586 -111122702 - AluSx SINE Alu -9 303 1 1512 161 115 14 chr10 34466586 34466721 -111122567 - AluJo SINE Alu -132 180 1 898 202 11 65 chr10 34466721 34466836 -111122452 - LTR37B LTR ERV1 -149 319 199 514 317 67 5 chr10 34467553 34467654 -111121634 + MIR SINE MIR 30 123 -139 189 0 0 0 chr10 34467654 34467675 -111121613 + (CAA)n Simple_repeat Simple_repeat 1 21 0 514 317 67 5 chr10 34467675 34467781 -111121507 + MIR SINE MIR 123 250 -12 1980 151 0 46 chr10 34467782 34467972 -111121316 - AluJo SINE Alu -2 310 140 2226 125 0 0 chr10 34467972 34468268 -111121020 - AluSq SINE Alu -17 296 1 1980 151 0 46 chr10 34468268 34468402 -111120886 - AluJo SINE Alu -172 140 1 1023 155 117 0 chr10 34469438 34469644 -111119644 + MER46B DNA MER2_type 1 105 -131 1053 157 61 5 chr10 34469678 34469876 -111119412 + Tigger4(Zombi) DNA MER2_type 2523 2731 0 1653 70 10 0 chr10 34470099 34470473 -111118815 + L1P4 LINE L1 5276 5692 -473 4142 124 58 27 chr10 34470474 34471448 -111117840 + MER11A LTR ERVK 1 1263 -3 3210 94 2 48 chr10 34471448 34471947 -111117341 + L1PA15 LINE L1 5685 6160 -5 2071 132 30 0 chr10 34471958 34472253 -111117035 + AluSx SINE Alu 1 304 -8 1974 138 35 0 chr10 34472351 34472640 -111116648 + AluSx SINE Alu 1 299 -13 186 338 0 12 chr10 34472670 34472750 -111116538 + L2 LINE L2 3141 3219 -53 472 181 87 27 chr10 34472967 34473116 -111116172 + MER113 DNA MER1_type? 84 241 -280 1904 138 50 0 chr10 34473214 34473511 -111115777 + AluSx SINE Alu 1 312 0 2630 141 18 18 chr10 34474045 34474214 -111115074 + MER6A DNA MER2_type 3 171 -694 2911 82 0 0 chr10 34474214 34474578 -111114710 - THE1B LTR MaLR 0 364 1 2630 141 18 18 chr10 34474578 34474842 -111114446 + MER6A DNA MER2_type 170 436 -169 1756 185 23 31 chr10 34474842 34475146 -111114142 + L1 LINE L1 4019 4321 -1825 1427 206 7 17 chr10 34475146 34475442 -111113846 + AluJo SINE Alu 1 293 -19 1756 185 23 31 chr10 34475442 34475488 -111113800 + L1 LINE L1 4321 4366 -1780 563 99 12 0 chr10 34475489 34475570 -111113718 + MER6A DNA MER2_type 417 498 -107 2356 67 0 14 chr10 34475570 34475897 -111113391 - AluY SINE Alu 0 311 1 906 163 51 17 chr10 34476113 34476291 -111112997 + MLT1E2 LTR MaLR 3 186 -440 994 175 0 44 chr10 34476294 34476477 -111112811 + FRAM SINE Alu 1 174 -2 2128 101 7 39 chr10 34476771 34477077 -111112211 - AluSp SINE Alu -17 296 1 2441 32 7 4 chr10 34477342 34477656 -111111632 + AluY SINE Alu 3 317 0 1905 103 62 35 chr10 34477953 34478243 -111111045 + AluSg SINE Alu 1 298 -12 1664 174 0 10 chr10 34478249 34478537 -111110751 - AluJo SINE Alu -27 285 1 701 149 0 0 chr10 34478575 34478682 -111110606 + FLAM_C SINE Alu 2 108 -35 1939 165 29 64 chr10 34479145 34479716 -111109572 - MLT2A2 LTR ERVL 0 554 1 278 105 0 88 chr10 34479799 34479856 -111109432 - MER75 DNA T2_type 0 514 463 1981 135 34 3 chr10 34479974 34480270 -111109018 - AluSx SINE Alu -4 308 4 819 197 35 0 chr10 34480951 34481093 -111108195 + FRAM SINE Alu 1 145 -31 1425 90 0 94 chr10 34481108 34481331 -111107957 - AluSp SINE Alu -23 290 89 2338 101 0 3 chr10 34481388 34481696 -111107592 + AluSg SINE Alu 1 307 -3 3177 145 42 70 chr10 34481972 34482643 -111106645 - LTR8 LTR ERV1 0 691 40 321 26 0 0 chr10 34482647 34482685 -111106603 + (TTA)n Simple_repeat Simple_repeat 2 39 0 2124 121 4 0 chr10 34482688 34482969 -111106319 - AluSp SINE Alu -31 282 1 1284 217 68 8 chr10 34482969 34483337 -111105951 - L1M2 LINE L1 -3087 3128 2739 627 229 10 44 chr10 34483857 34483941 -111105347 - L1M2 LINE L1 -3470 2745 2660 1814 218 33 81 chr10 34483941 34484450 -111104838 + LTR9 LTR ERV1 3 535 -77 189 0 0 0 chr10 34484450 34484471 -111104817 + (TC)n Simple_repeat Simple_repeat 2 22 0 10660 57 15 40 chr10 34484478 34485894 -111103394 - SVA Other Other 0 1386 6 1814 218 33 81 chr10 34485894 34486017 -111103271 + LTR9 LTR ERV1 541 612 0 627 229 10 44 chr10 34486017 34486137 -111103151 - L1M2 LINE L1 -3555 2660 2548 919 141 141 5 chr10 34486138 34486323 -111102965 - Tigger1 DNA MER2_type -1 2417 2208 * 1001 160 0 0 chr10 34486318 34486474 -111102814 - Tigger1 DNA MER2_type -2261 157 2 1894 242 80 49 chr10 34486477 34487002 -111102286 - L1M2 LINE L1 -3668 2547 2040 2240 123 0 0 chr10 34487002 34487304 -111101984 - AluSx SINE Alu -10 302 1 1894 242 80 49 chr10 34487304 34487604 -111101684 - L1M2 LINE L1 -4175 2040 1773 2386 90 0 3 chr10 34487604 34487904 -111101384 - AluY SINE Alu -12 299 1 1894 242 80 49 chr10 34487904 34488061 -111101227 - L1M2 LINE L1 -4442 1773 1622 2337 92 7 13 chr10 34488063 34488369 -111100919 - AluSp SINE Alu -7 306 3 360 43 0 0 chr10 34488371 34488417 -111100871 + (TTTG)n Simple_repeat Simple_repeat 2 47 0 2115 113 0 3 chr10 34488417 34488701 -111100587 - AluSg SINE Alu -27 283 1 282 196 0 0 chr10 34488909 34488965 -111100323 + L1MA9 LINE L1 6257 6312 0 964 308 44 74 chr10 34489245 34489931 -111099357 + HERV16 LTR ERVL 571 1235 -3761 263 207 142 34 chr10 34489944 34490064 -111099224 + L1ME LINE L1 5328 5459 -702 1599 173 17 75 chr10 34490187 34490558 -111098730 - L1MA9 LINE L1 0 6376 6030 2292 123 0 0 chr10 34490558 34490868 -111098420 - AluSx SINE Alu -2 310 1 1599 173 17 75 chr10 34490868 34490907 -111098381 - L1MA9 LINE L1 -346 6030 5990 660 61 0 0 chr10 34490907 34490989 -111098299 - Alu SINE Alu -10 302 221 4669 157 32 59 chr10 34490989 34492596 -111096692 - L1MA9 LINE L1 -376 6000 4425 246 128 0 0 chr10 34492596 34492635 -111096653 + (TTCC)n Simple_repeat Simple_repeat 4 42 0 1968 177 0 0 chr10 34492638 34492949 -111096339 - AluJb SINE Alu -1 311 1 2218 113 7 3 chr10 34492961 34493271 -111096017 - AluSp SINE Alu -1 312 2 2156 229 51 117 chr10 34493271 34494711 -111094577 - L1MA9 LINE L1 -2837 3373 1840 2318 97 3 0 chr10 34494711 34495011 -111094277 - AluSg SINE Alu -9 301 1 2156 229 51 117 chr10 34495011 34495336 -111093952 - L1MA9 LINE L1 -4370 1840 1495 2003 106 24 27 chr10 34495336 34495628 -111093660 - AluSg SINE Alu -19 291 1 2156 229 51 117 chr10 34495628 34495757 -111093531 - L1MA9 LINE L1 -4715 1495 4 317 219 73 12 chr10 34496215 34496297 -111092991 - MLT1H-int LTR MaLR -1280 91 5 353 220 30 20 chr10 34496301 34496401 -111092887 - MLT1H LTR MaLR 0 549 449 704 162 0 0 chr10 34496414 34496531 -111092757 - AluSg/x SINE Alu 0 309 193 293 316 166 21 chr10 34496532 34496725 -111092563 - MLT1B LTR MaLR -89 460 240 266 267 35 0 chr10 34496879 34496965 -111092323 - L1MC4a LINE L1 -551 7257 7169 1237 93 12 0 chr10 34496967 34497128 -111092160 - AluSg/x SINE Alu -6 304 142 978 254 80 75 chr10 34497230 34497589 -111091699 - L1MC4a LINE L1 -856 6952 6589 261 57 0 0 chr10 34497589 34497624 -111091664 + (CA)n Simple_repeat Simple_repeat 2 36 0 978 254 80 75 chr10 34497624 34497690 -111091598 - L1MC4a LINE L1 -1219 6589 6525 2016 135 4 4 chr10 34497718 34497999 -111091289 - AluJb SINE Alu -31 281 1 2306 110 48 28 chr10 34498370 34498726 -111090562 + THE1B LTR MaLR 1 363 -1 2084 127 3 3 chr10 34498787 34499079 -111090209 + AluSp SINE Alu 4 295 -18 1375 154 162 18 chr10 34499196 34499468 -111089820 - AluSx SINE Alu -1 311 1 1638 159 16 41 chr10 34499951 34500053 -111089235 + L1MB3 LINE L1 5582 5685 -498 2159 139 0 0 chr10 34500053 34500362 -111088926 - AluSg SINE Alu -1 309 1 1638 159 16 41 chr10 34500362 34500574 -111088714 + L1MB3 LINE L1 5685 5888 -295 648 90 0 11 chr10 34500654 34500743 -111088545 + AluSp SINE Alu 64 151 -162 509 164 100 1 chr10 34500749 34500852 -111088436 - MLT1B LTR MaLR -269 112 1 228 111 0 0 chr10 34500852 34500888 -111088400 - L1M3 LINE L1 -243 5928 5893 2255 125 0 3 chr10 34500927 34501238 -111088050 + AluSx SINE Alu 1 310 -2 745 244 78 5 chr10 34501261 34501466 -111087822 + MLT1A2 LTR MaLR 155 374 0 1507 120 32 16 chr10 34501470 34501720 -111087568 + L1MB3 LINE L1 5928 6181 -2 365 291 213 0 chr10 34502396 34502537 -111086751 + MER5A DNA MER1_type 19 189 0 198 308 0 0 chr10 34502566 34502618 -111086670 + MER5A DNA MER1_type 43 94 -95 1304 170 118 15 chr10 34502706 34502977 -111086311 + AluJo SINE Alu 5 303 -9 1847 125 15 95 chr10 34502977 34503304 -111085984 + AluSx SINE Alu 1 301 -11 456 19 0 0 chr10 34503306 34503359 -111085929 + (GGAA)n Simple_repeat Simple_repeat 4 56 0 4371 78 9 0 chr10 34503418 34503967 -111085321 - MER41A LTR ERV1 0 554 1 240 270 87 48 chr10 34504983 34505059 -111084229 + MIR SINE MIR 18 102 -160 2013 130 0 7 chr10 34505059 34505344 -111083944 - AluJb SINE Alu -25 287 5 240 270 87 48 chr10 34505344 34505393 -111083895 + MIR SINE MIR 102 148 -114 2259 137 0 0 chr10 34505519 34505832 -111083456 - AluSq SINE Alu 0 313 1 183 111 0 0 chr10 34505832 34505859 -111083429 - MER5A DNA MER1_type -113 76 50 851 249 38 38 chr10 34505900 34506189 -111083099 - L1MC4a LINE L1 0 7808 7520 1049 155 59 5 chr10 34506247 34506566 -111082722 - AluJo SINE Alu 0 415 87 366 227 87 70 chr10 34506599 34506706 -111082582 - MER5A DNA MER1_type -1 188 84 2147 103 24 0 chr10 34506706 34506996 -111082292 - AluSx SINE Alu -13 299 3 2213 101 14 0 chr10 34506997 34507294 -111081994 - AluSx SINE Alu -11 301 1 366 227 87 70 chr10 34507294 34507369 -111081919 - MER5A DNA MER1_type -104 85 1 1484 166 46 53 chr10 34508160 34508462 -111080826 + AluJo SINE Alu 7 306 -6 2320 86 3 13 chr10 34508485 34508787 -111080501 - AluSp SINE Alu -14 299 1 1839 145 13 59 chr10 34508792 34508836 -111080452 - L1MB2 LINE L1 -2 6169 6125 192 111 0 0 chr10 34508836 34508872 -111080416 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 1320 170 93 4 chr10 34508872 34509131 -111080157 - AluJo SINE Alu -30 282 1 1839 145 13 59 chr10 34509131 34509224 -111080064 - L1MB2 LINE L1 -45 6126 6030 1777 117 23 12 chr10 34509224 34509480 -111079808 - AluSq SINE Alu -54 259 1 1839 145 13 59 chr10 34509480 34509713 -111079575 - L1MB2 LINE L1 -141 6030 5814 674 108 0 0 chr10 34509715 34509817 -111079471 - AluY SINE Alu 0 311 210 1163 147 84 0 chr10 34509819 34510009 -111079279 - L1MB2 LINE L1 -358 5813 5608 2490 66 3 0 chr10 34510012 34510314 -111078974 - AluY SINE Alu -8 303 1 1467 214 3 3 chr10 34510320 34510619 -111078669 - AluJo SINE Alu -13 299 1 557 232 46 0 chr10 34510619 34510770 -111078518 - L1MB2 LINE L1 -979 5167 5010 24 0 0 0 chr10 34510770 34510794 -111078494 + AT_rich Low_complexity Low_complexity 1 24 0 2149 105 3 14 chr10 34510794 34511090 -111078198 - AluSx SINE Alu -14 298 6 2158 133 0 3 chr10 34511097 34511405 -111077883 - AluSx SINE Alu -5 307 1 1708 230 112 18 chr10 34511405 34511809 -111077479 - L1 LINE L1 -1347 4799 4434 1969 129 34 3 chr10 34511809 34512104 -111077184 - AluSq SINE Alu -9 304 1 1708 230 112 18 chr10 34512104 34512131 -111077157 - L1 LINE L1 -1712 4434 4411 345 47 0 0 chr10 34512131 34512174 -111077114 + (TG)n Simple_repeat Simple_repeat 2 44 0 1708 230 112 18 chr10 34512174 34512428 -111076860 - L1 LINE L1 -1735 4411 4009 2771 192 62 114 chr10 34512450 34512862 -111076426 - MER21B LTR ERV1 -54 809 462 2397 95 3 0 chr10 34512862 34513168 -111076120 - AluSp SINE Alu -6 307 1 2771 192 62 114 chr10 34513168 34513608 -111075680 - MER21B LTR ERV1 -401 462 1 1150 205 27 4 chr10 34513609 34513872 -111075416 - L1 LINE L1 -2144 4002 3734 1708 123 67 8 chr10 34513883 34514136 -111075152 + AluSx SINE Alu 1 268 -44 416 236 107 36 chr10 34514678 34514690 -111074598 + MER63 DNA MER1_type 907 917 -143 207 0 0 0 chr10 34514690 34514713 -111074575 + (TA)n Simple_repeat Simple_repeat 2 24 0 2056 119 7 27 chr10 34514714 34515008 -111074280 - AluSx SINE Alu -23 289 2 416 236 107 36 chr10 34515008 34515133 -111074155 + MER63 DNA MER1_type 916 1056 -4 2365 78 20 0 chr10 34515336 34515632 -111073656 + AluSg SINE Alu 1 302 -8 441 287 66 18 chr10 34515699 34515866 -111073422 - MIR SINE MIR -49 213 39 2284 107 0 7 chr10 34516144 34516444 -111072844 + AluSx SINE Alu 1 298 -14 229 189 0 0 chr10 34516808 34516861 -111072427 + MIR SINE MIR 145 197 -65 1502 260 220 9 chr10 34517540 34518477 -111070811 + L2 LINE L2 2176 3312 -1 189 0 0 0 chr10 34519273 34519294 -111069994 + (T)n Simple_repeat Simple_repeat 1 21 0 250 186 17 17 chr10 34520415 34520474 -111068814 + MIR SINE MIR 82 140 -122 2268 118 10 0 chr10 34521377 34521683 -111067605 + AluSx SINE Alu 2 310 -2 2097 120 14 0 chr10 34521832 34522123 -111067165 - AluSq SINE Alu -16 297 3 2089 95 46 11 chr10 34526186 34526319 -111062969 + AluSg SINE Alu 1 128 -182 2304 92 0 29 chr10 34526319 34526635 -111062653 + AluY SINE Alu 1 307 -4 2089 95 46 11 chr10 34526635 34526786 -111062502 + AluSg SINE Alu 128 295 -15 480 230 61 97 chr10 34526927 34527063 -111062225 + MIR3 SINE MIR 12 138 -70 2220 117 0 3 chr10 34527063 34527372 -111061916 + AluSx SINE Alu 1 308 -4 480 230 61 97 chr10 34527372 34527441 -111061847 + MIR3 SINE MIR 138 208 0 227 246 9 97 chr10 34527778 34527892 -111061396 - MIR3 SINE MIR -3 205 102 491 315 80 41 chr10 34528045 34528359 -111060929 + L3 LINE CR1 1155 1480 -97 1994 116 0 33 chr10 34528402 34528704 -111060584 - AluJb SINE Alu -20 292 1 266 53 0 0 chr10 34528923 34528961 -111060327 - AluSx SINE Alu -9 293 256 1660 98 0 5 chr10 34528961 34529176 -111060112 - AluSx SINE Alu -98 214 1 2248 12 0 0 chr10 34529206 34529453 -111059835 - AluYa5 SINE Alu -2 309 63 490 196 120 120 chr10 34529627 34529903 -111059385 + MER46C DNA MER2_type 3 281 -57 2417 76 7 3 chr10 34529903 34530207 -111059081 + AluSg SINE Alu 1 305 -5 490 196 120 120 chr10 34530207 34530231 -111059057 + MER46C DNA MER2_type 280 303 -35 1923 108 16 0 chr10 34531035 34531293 -111057995 + AluSx SINE Alu 29 290 -22 2213 102 0 0 chr10 34531293 34531577 -111057711 + AluSg1 SINE Alu 1 284 -25 2423 76 0 0 chr10 34531971 34532272 -111057016 - AluY SINE Alu -10 301 1 1151 84 0 0 chr10 34532272 34532415 -111056873 - AluSq/x SINE Alu -170 143 1 729 112 0 80 chr10 34532732 34532857 -111056431 - AluSq/x SINE Alu -198 115 1 2234 112 0 7 chr10 34533181 34533484 -111055804 - AluSx SINE Alu -11 301 1 1738 161 46 3 chr10 34533762 34534047 -111055241 + AluJb SINE Alu 1 297 -15 2092 137 54 81 chr10 34534639 34534834 -111054454 + Tigger2a DNA MER2_type 1 200 -2508 1833 170 28 0 chr10 34534834 34535122 -111054166 - AluJb SINE Alu -16 296 1 2092 137 54 81 chr10 34535122 34535372 -111053916 + Tigger2a DNA MER2_type 200 434 0 193 346 49 12 chr10 34535399 34535480 -111053808 + L3b LINE CR1 1426 1509 -74 204 40 0 0 chr10 34536983 34537008 -111052280 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 2143 110 4 0 chr10 34537010 34537291 -111051997 - AluSx SINE Alu -30 282 1 1425 145 32 119 chr10 34539819 34540164 -111049124 - AluYb8 SINE Alu -3 315 1 416 141 0 0 chr10 34540321 34540392 -111048896 + AluS SINE Alu 1 71 -247 30 27 0 0 chr10 34540910 34540947 -111048341 + AT_rich Low_complexity Low_complexity 1 37 0 331 299 249 28 chr10 34541292 34541469 -111047819 - MIR SINE MIR -20 242 27 267 158 53 0 chr10 34542026 34542083 -111047205 - MER116 DNA Mariner -3 77 18 1579 146 117 10 chr10 34542225 34542534 -111046754 - MER46B DNA MER2_type 0 236 20 1050 152 71 10 chr10 34543644 34543841 -111045447 - MER3 DNA MER1_type 0 209 1 2085 96 0 42 chr10 34543897 34544210 -111045078 - AluSg SINE Alu -10 300 1 2271 85 3 3 chr10 34544603 34544897 -111044391 + AluSg SINE Alu 1 294 -16 2216 108 0 16 chr10 34545256 34545563 -111043725 - AluSq SINE Alu -11 302 1 2414 50 0 0 chr10 34545769 34546073 -111043215 - AluY SINE Alu 0 304 1 263 237 53 0 chr10 34546979 34547055 -111042233 - L1MC4 LINE L1 -40 8002 7923 2295 114 0 0 chr10 34547156 34547462 -111041826 - AluSx SINE Alu -6 306 1 240 111 0 0 chr10 34547517 34547553 -111041735 + (CAT)n Simple_repeat Simple_repeat 1 36 0 1076 249 189 38 chr10 34547553 34547892 -111041396 - L1MC4 LINE L1 -507 7535 7249 2236 95 7 3 chr10 34547892 34548188 -111041100 - AluY SINE Alu -14 297 1 1076 249 189 38 chr10 34548188 34548225 -111041063 - L1MC4 LINE L1 -793 7249 7219 1216 52 0 0 chr10 34548225 34548378 -111040910 - L1PA5 LINE L1 -4 6150 5998 1076 249 189 38 chr10 34548378 34548411 -111040877 - L1MC4 LINE L1 -823 7219 7192 2391 97 0 0 chr10 34548411 34548710 -111040578 - AluSx SINE Alu -13 299 1 1076 249 189 38 chr10 34548710 34549015 -111040273 - L1MC4 LINE L1 -850 7192 6934 504 86 0 0 chr10 34549015 34549085 -111040203 + (TCTA)n Simple_repeat Simple_repeat 1 70 0 1076 249 189 38 chr10 34549085 34549127 -111040161 - L1MC4 LINE L1 -1108 6934 6661 2166 265 49 9 chr10 34549184 34549943 -111039345 + L1MD2 LINE L1 4416 5204 -942 1506 76 0 0 chr10 34549968 34550153 -111039135 + AluY SINE Alu 1 185 -126 596 78 0 0 chr10 34550153 34550230 -111039058 + AluY SINE Alu 218 294 -17 3684 192 49 50 chr10 34550234 34550342 -111038946 + L1MD2 LINE L1 5227 5334 -1025 2146 120 0 7 chr10 34550342 34550641 -111038647 + AluSx SINE Alu 1 297 -15 3684 192 49 50 chr10 34550641 34550998 -111038290 + L1MD2 LINE L1 5334 5690 -669 2102 138 7 0 chr10 34550998 34551302 -111037986 + AluSx SINE Alu 1 306 -6 3684 192 49 50 chr10 34551302 34551916 -111037372 + L1MD2 LINE L1 5690 6309 -50 2523 71 6 0 chr10 34552614 34552925 -111036363 + AluSp SINE Alu 1 313 0 1055 230 28 0 chr10 34553187 34553400 -111035888 + MER58A DNA MER1_type 3 221 -3 473 298 92 25 chr10 34554479 34554717 -111034571 + MIR SINE MIR 3 256 -6 264 30 0 0 chr10 34554834 34554867 -111034421 + (CA)n Simple_repeat Simple_repeat 2 34 0 323 234 56 54 chr10 34554935 34555173 -111034115 - L1MC4a LINE L1 -132 5989 5761 1841 123 38 34 chr10 34556081 34556373 -111032915 + AluSx SINE Alu 1 293 -19 4389 129 31 18 chr10 34556635 34557410 -111031878 + L1MA3 LINE L1 5521 6305 0 21 36 0 0 chr10 34557410 34557438 -111031850 + AT_rich Low_complexity Low_complexity 1 28 0 970 85 0 0 chr10 34557550 34557680 -111031608 + FLAM_C SINE Alu 1 130 -3 416 253 26 113 chr10 34557856 34557889 -111031399 + MIR SINE MIR 2 36 -226 2190 139 0 0 chr10 34557889 34558192 -111031096 + AluSx SINE Alu 1 303 -9 416 253 26 113 chr10 34558192 34558352 -111030936 + MIR SINE MIR 36 178 -84 1849 115 4 4 chr10 34558611 34558864 -111030424 + AluSx SINE Alu 44 296 -16 394 290 52 5 chr10 34558922 34559005 -111030283 + L1MC4 LINE L1 7841 7919 -123 2572 49 0 10 chr10 34559005 34559313 -111029975 + AluY SINE Alu 1 305 -6 394 290 52 5 chr10 34559313 34559422 -111029866 + L1MC4 LINE L1 7919 8042 0 1545 145 148 6 chr10 34559586 34559904 -111029384 - Tigger7 DNA MER2_type 0 2487 2125 540 202 37 9 chr10 34559938 34560047 -111029241 - Tigger7 DNA MER2_type -2375 112 1 371 268 81 42 chr10 34560055 34560272 -111029016 - L2 LINE L2 -353 2919 2688 548 231 34 84 chr10 34560451 34560689 -111028599 + L2 LINE L2 3084 3309 -4 300 314 204 40 chr10 34561285 34561584 -111027704 - L2 LINE L2 -19 3294 2947 2314 94 16 0 chr10 34561584 34561891 -111027397 + AluSx SINE Alu 1 312 0 21 36 0 0 chr10 34561958 34561986 -111027302 + AT_rich Low_complexity Low_complexity 1 28 0 22 56 0 0 chr10 34562106 34562142 -111027146 + AT_rich Low_complexity Low_complexity 1 36 0 198 357 83 79 chr10 34562793 34563059 -111026229 + L2 LINE L2 2926 3192 -80 25 51 0 0 chr10 34563359 34563398 -111025890 + AT_rich Low_complexity Low_complexity 1 39 0 992 264 59 52 chr10 34563727 34564122 -111025166 + L2 LINE L2 2584 3057 -256 1793 229 68 15 chr10 34564125 34564785 -111024503 + L1ME2 LINE L1 5442 6154 -10 373 210 95 70 chr10 34564824 34565024 -111024264 + L1MC4 LINE L1 7826 8030 -12 383 298 149 0 chr10 34565066 34565247 -111024041 + L2 LINE L2 3106 3313 0 2137 114 0 0 chr10 34565356 34565636 -111023652 + AluSx SINE Alu 22 301 -11 586 308 157 26 chr10 34566372 34566830 -111022458 + L2 LINE L2 2125 2642 -672 861 234 62 14 chr10 34567347 34567638 -111021650 + L1MC4 LINE L1 7284 7588 -454 2163 98 3 14 chr10 34567658 34567954 -111021334 - AluSx SINE Alu -19 293 1 576 153 102 77 chr10 34567965 34568161 -111021127 + L1MC4 LINE L1 7839 8039 -3 231 277 18 66 chr10 34568409 34568575 -111020713 + MER103 DNA DNA 1 158 -8 1987 125 35 0 chr10 34568575 34568862 -111020426 - AluSx SINE Alu -15 297 1 940 227 14 5 chr10 34569106 34569313 -111019975 + MER58A DNA MER1_type 12 220 -4 848 203 31 0 chr10 34569328 34569491 -111019797 - FAM SINE Alu -7 168 1 206 259 56 19 chr10 34569703 34569757 -111019531 - MIR SINE MIR -187 75 20 1835 146 20 65 chr10 34570710 34571107 -111018181 + L1MA4 LINE L1 5913 6291 -9 214 312 214 0 chr10 34571552 34571659 -111017629 + MIR SINE MIR 25 152 -56 2418 72 0 7 chr10 34571907 34572212 -111017076 - AluY SINE Alu -8 303 1 1339 119 115 9 chr10 34572377 34572603 -111016685 + AluSx SINE Alu 56 305 -7 234 0 0 0 chr10 34572724 34572750 -111016538 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 1978 102 0 24 chr10 34572761 34573085 -111016203 + AluY SINE Alu 1 317 0 509 308 111 31 chr10 34574273 34574598 -111014690 + MLT1I LTR MaLR 59 409 0 2387 190 90 25 chr10 34574826 34575112 -111014176 + L1MA6 LINE L1 5372 5638 -660 264 30 0 0 chr10 34575112 34575145 -111014143 + (CA)n Simple_repeat Simple_repeat 2 34 0 2387 190 90 25 chr10 34575145 34575616 -111013672 + L1MA6 LINE L1 5638 6267 -31 1574 190 57 9 chr10 34575616 34575947 -111013341 - MER7A DNA MER2_type -1 345 1 2387 190 90 25 chr10 34575947 34575979 -111013309 + L1MA6 LINE L1 6267 6295 -3 963 273 45 36 chr10 34577124 34577483 -111011805 + MLT1I LTR MaLR 40 401 -8 486 340 79 23 chr10 34577951 34578356 -111010932 - L2 LINE L2 -237 3035 2545 1310 117 0 0 chr10 34579250 34579429 -111009859 + AluSq SINE Alu 132 310 -3 182 364 85 0 chr10 34580282 34580411 -111008877 - L2 LINE L2 -278 2994 2855 695 213 173 6 chr10 34580413 34580851 -111008437 + MLT1F1 LTR MaLR 1 567 0 391 279 66 90 chr10 34581001 34581109 -111008179 + MLT1F1-int LTR MaLR 308 417 -954 2195 77 30 7 chr10 34581109 34581406 -111007882 + AluSc SINE Alu 1 304 -5 391 279 66 90 chr10 34581406 34581598 -111007690 + MLT1F1-int LTR MaLR 417 601 -770 262 346 34 22 chr10 34581833 34582012 -111007276 + MLT1F1-int LTR MaLR 699 879 -492 954 266 117 19 chr10 34582532 34582961 -111006327 - MER20B DNA MER1_type -312 471 1 1905 307 152 25 chr10 34583224 34584112 -111005176 + L2 LINE L2 75 1173 -2141 2335 95 7 3 chr10 34584112 34584417 -111004871 - AluSq SINE Alu -7 306 1 1905 307 152 25 chr10 34584417 34584794 -111004494 + L2 LINE L2 1173 1501 -1813 250 203 31 16 chr10 34584850 34584914 -111004374 - L2 LINE L2 -1686 1628 1564 1753 254 85 25 chr10 34584992 34585684 -111003604 - L1MEc LINE L1 -5483 913 180 1081 268 282 32 chr10 34585746 34586813 -111002475 + L2 LINE L2 1729 3070 -243 814 167 7 0 chr10 34586850 34587023 -111002265 + AluJb SINE Alu 145 318 0 1105 142 6 6 chr10 34587426 34587595 -111001693 + AluSg/x SINE Alu 114 282 -28 1631 158 34 34 chr10 34588597 34588888 -111000400 + AluJb SINE Alu 1 291 -21 195 69 0 0 chr10 34589363 34589392 -110999896 + (TG)n Simple_repeat Simple_repeat 2 30 0 2282 72 3 3 chr10 34591269 34591560 -110997728 - AluSq SINE Alu -22 291 1 2230 106 0 3 chr10 34592553 34592856 -110996432 + AluSx SINE Alu 1 302 -10 23 33 0 0 chr10 34594621 34594651 -110994637 + GC_rich Low_complexity Low_complexity 1 30 0 198 287 32 167 chr10 34596792 34597074 -110992214 - L2 LINE L2 -101 3171 2928 183 42 0 0 chr10 34597624 34597648 -110991640 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1704 162 20 14 chr10 34597650 34597947 -110991341 - AluJo SINE Alu -11 301 3 2342 97 0 3 chr10 34599424 34599724 -110989564 + AluSq SINE Alu 1 299 -14 222 128 0 0 chr10 34599752 34599791 -110989497 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 189 0 0 0 chr10 34600007 34600028 -110989260 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2171 98 0 17 chr10 34600036 34600323 -110988965 - AluSx SINE Alu -30 282 1 2515 56 0 10 chr10 34600330 34600634 -110988654 - AluY SINE Alu -10 301 1 388 305 0 0 chr10 34600695 34600800 -110988488 + MIR SINE MIR 158 262 0 191 273 18 0 chr10 34600801 34600856 -110988432 + L2 LINE L2 3001 3056 -216 190 176 0 0 chr10 34600852 34600886 -110988402 + MIR SINE MIR 103 136 -72 * 312 323 213 0 chr10 34600975 34601139 -110988149 - MIR SINE MIR 0 262 64 2237 125 3 0 chr10 34601161 34601473 -110987815 + AluSp SINE Alu 1 313 0 331 349 32 24 chr10 34601833 34601959 -110987329 - L2 LINE L2 -1 3271 3145 1389 96 0 0 chr10 34602581 34602758 -110986530 + AluY SINE Alu 122 298 -13 2694 135 43 22 chr10 34602992 34603452 -110985836 + MER1A DNA MER1_type 60 529 0 2243 97 47 0 chr10 34603900 34604198 -110985090 - AluSx SINE Alu 0 312 1 2453 50 10 0 chr10 34604991 34605289 -110983999 + AluY SINE Alu 2 302 -9 1712 179 7 3 chr10 34605706 34606047 -110983241 - AluJo SINE Alu 0 342 1 313 309 74 28 chr10 34606085 34606139 -110983149 - L1ME4a LINE L1 -188 5933 5883 2270 113 3 0 chr10 34606139 34606440 -110982848 - AluSx SINE Alu -8 304 3 313 309 74 28 chr10 34606440 34606602 -110982686 - L1ME4a LINE L1 -238 5883 5707 1857 145 46 3 chr10 34606653 34606935 -110982353 + AluJb SINE Alu 5 298 -14 432 233 48 20 chr10 34607204 34607350 -110981938 - MER103 DNA DNA -15 151 2 296 303 114 8 chr10 34607776 34607908 -110981380 + MIR SINE MIR 117 262 0 24 0 0 0 chr10 34608076 34608100 -110981188 + AT_rich Low_complexity Low_complexity 1 24 0 2246 101 0 0 chr10 34608909 34609196 -110980092 + AluSx SINE Alu 11 297 -15 590 225 104 8 chr10 34609196 34609421 -110979867 + LTR56 LTR ERV1 210 437 0 513 279 0 14 chr10 34609449 34609589 -110979699 + MIR SINE MIR 1 138 -124 679 172 60 8 chr10 34609608 34609742 -110979546 + MER34C LTR ERV1 1 141 -444 2886 136 68 52 chr10 34609751 34610020 -110979268 + LTR36 LTR ERV1 1 264 -347 3600 84 80 0 chr10 34610020 34610533 -110978755 + MER41A LTR ERV1 1 554 0 2638 137 19 12 chr10 34610541 34610966 -110978322 + MSTA LTR MaLR 1 428 0 2886 136 68 52 chr10 34610966 34611288 -110978000 + LTR36 LTR ERV1 270 611 0 380 198 93 0 chr10 34611288 34611368 -110977920 + MER34C LTR ERV1 158 245 -340 1635 183 0 24 chr10 34611379 34611668 -110977620 - AluJb SINE Alu -30 282 1 2157 106 3 60 chr10 34612290 34612621 -110976667 - AluSq SINE Alu -1 312 1 393 329 71 0 chr10 34612781 34612921 -110976367 + MIR3 SINE MIR 50 199 -9 1263 125 46 19 chr10 34613091 34613307 -110975981 - MER30 DNA MER1_type -8 222 1 180 77 0 0 chr10 34613732 34613758 -110975530 + (CAA)n Simple_repeat Simple_repeat 1 26 0 2054 114 13 25 chr10 34613819 34614135 -110975153 + AluSx SINE Alu 1 312 0 2066 108 3 0 chr10 34614139 34614425 -110974863 + AluSq SINE Alu 1 287 -26 258 32 0 0 chr10 34615258 34615289 -110973999 + (TATG)n Simple_repeat Simple_repeat 2 32 0 2109 109 18 0 chr10 34615295 34615578 -110973710 - AluSx SINE Alu -24 288 1 292 364 39 10 chr10 34616597 34616803 -110972485 + L2 LINE L2 2826 3037 -235 392 314 32 8 chr10 34617108 34617232 -110972056 - MIR SINE MIR -18 244 118 22 56 0 0 chr10 34617685 34617721 -110971567 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr10 34618353 34618374 -110970914 + AT_rich Low_complexity Low_complexity 1 21 0 492 321 60 6 chr10 34618703 34618871 -110970417 + MER5B DNA MER1_type 2 178 0 976 189 5 19 chr10 34618923 34619135 -110970153 + MER3 DNA MER1_type 1 209 0 2129 86 16 30 chr10 34619904 34620207 -110969081 + AluSx SINE Alu 1 299 -13 265 246 14 0 chr10 34620211 34620280 -110969008 + L2 LINE L2 3003 3072 -241 836 184 32 11 chr10 34620397 34620582 -110968706 + MER5A DNA MER1_type 1 189 0 2193 88 3 11 chr10 34621027 34621334 -110967954 + AluSq SINE Alu 1 305 0 722 270 46 35 chr10 34621369 34621628 -110967660 + MIR SINE MIR 1 262 0 763 269 71 4 chr10 34621792 34622030 -110967258 + MLT1L LTR MaLR 138 391 -224 27 62 0 0 chr10 34622435 34622483 -110966805 + AT_rich Low_complexity Low_complexity 1 48 0 31 26 0 0 chr10 34622941 34622979 -110966309 + AT_rich Low_complexity Low_complexity 1 38 0 244 333 54 21 chr10 34623045 34623138 -110966150 + L2 LINE L2 3189 3284 -29 23 0 0 0 chr10 34623226 34623249 -110966039 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr10 34624076 34624100 -110965188 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr10 34624598 34624619 -110964669 + AT_rich Low_complexity Low_complexity 1 21 0 210 105 0 0 chr10 34627338 34627376 -110961912 + (T)n Simple_repeat Simple_repeat 1 38 0 593 115 10 0 chr10 34628382 34628478 -110960810 + (CA)n Simple_repeat Simple_repeat 1 97 0 317 229 133 0 chr10 34628535 34628640 -110960648 + MER94 DNA DNA 1 119 -15 418 262 40 47 chr10 34629120 34629269 -110960019 - L2 LINE L2 -5 3308 3161 2690 118 23 5 chr10 34629269 34629700 -110959588 - Tigger2 DNA MER2_type 0 2718 2280 441 129 0 14 chr10 34629698 34629768 -110959520 - Tigger2 DNA MER2_type -2649 69 1 * 556 293 67 18 chr10 34629768 34629813 -110959475 - L2 LINE L2 -158 3155 3114 2209 110 3 0 chr10 34629813 34630104 -110959184 + AluSx SINE Alu 1 292 -20 556 293 67 18 chr10 34630104 34630427 -110958861 - L2 LINE L2 -199 3114 2770 216 0 0 0 chr10 34630786 34630810 -110958478 + (T)n Simple_repeat Simple_repeat 1 24 0 2431 106 0 0 chr10 34630821 34631178 -110958110 + AluSx SINE Alu 1 357 0 536 232 47 62 chr10 34631534 34631637 -110957651 - MER46C DNA MER2_type -129 209 106 1890 167 7 0 chr10 34631637 34631936 -110957352 - AluJb SINE Alu -10 302 2 536 232 47 62 chr10 34631936 34632043 -110957245 - MER46C DNA MER2_type -232 106 2 332 262 162 77 chr10 34632493 34632920 -110956368 + MLT1J LTR MaLR 1 463 -48 1999 135 0 17 chr10 34632920 34633251 -110956037 - AluSx SINE Alu 0 326 1 1798 179 23 6 chr10 34633251 34633597 -110955691 - L1PB4 LINE L1 -12 6144 5793 315 177 25 222 chr10 34633719 34633917 -110955371 + L1ME3 LINE L1 6001 6159 -3 1820 165 0 3 chr10 34633919 34634243 -110955045 - AluJb SINE Alu 0 323 1 2006 136 17 0 chr10 34634356 34634650 -110954638 - AluSx SINE Alu -11 301 3 654 160 0 0 chr10 34634841 34634941 -110954347 - FLAM_A SINE Alu -19 123 24 1792 140 39 11 chr10 34636082 34636367 -110952921 - AluSx SINE Alu -19 293 1 2448 102 37 8 chr10 34637018 34637372 -110951916 + THE1B LTR MaLR 1 364 0 2179 122 0 0 chr10 34637649 34637943 -110951345 + AluSq SINE Alu 1 294 -19 1764 178 17 3 chr10 34639219 34639512 -110949776 - AluJo SINE Alu -15 297 1 673 233 90 11 chr10 34640032 34640221 -110949067 + MIR SINE MIR 23 226 -36 5537 89 8 1 chr10 34640295 34641079 -110948209 - L1MA2 LINE L1 0 6304 5516 286 281 100 62 chr10 34641691 34641851 -110947437 - MIR SINE MIR -11 251 86 1539 167 41 41 chr10 34641901 34642195 -110947093 + AluJb SINE Alu 2 295 -17 453 207 85 0 chr10 34642704 34642868 -110946420 + MER113 DNA MER1_type? 4 181 -340 587 106 0 0 chr10 34642868 34642953 -110946335 - U6 snRNA snRNA -22 85 1 1669 142 55 10 chr10 34643159 34643448 -110945840 - AluSx SINE Alu -10 302 1 2030 122 0 7 chr10 34644000 34644315 -110944973 + AluSx SINE Alu 6 318 0 1904 125 0 44 chr10 34645095 34645228 -110944060 + AluJo SINE Alu 1 138 -165 2466 68 13 0 chr10 34645228 34645535 -110943753 + AluY SINE Alu 1 311 0 1904 125 0 44 chr10 34645535 34645717 -110943571 + AluJo SINE Alu 138 303 0 2077 147 0 0 chr10 34646405 34646697 -110942591 - AluSq SINE Alu -21 292 1 616 242 162 0 chr10 34646709 34647025 -110942263 - L1ME3A LINE L1 -9 6161 5742 1037 170 6 0 chr10 34647216 34647375 -110941913 + AluJb SINE Alu 145 304 -8 1653 205 0 13 chr10 34647490 34647802 -110941486 - AluJo SINE Alu -4 308 1 205 200 0 0 chr10 34647806 34647846 -110941442 + T-rich Low_complexity Low_complexity 1 40 0 6293 34 0 55 chr10 34647847 34648708 -110940580 - L1PA3 LINE L1 -5 6150 5337 753 70 0 0 chr10 34649304 34649404 -110939884 + (TTCC)n Simple_repeat Simple_repeat 1 100 0 1971 230 88 21 chr10 34649524 34649915 -110939373 + L1MC4 LINE L1 6462 6912 -1130 2543 68 0 0 chr10 34649915 34650225 -110939063 - AluY SINE Alu -1 310 1 1971 230 88 21 chr10 34650225 34650459 -110938829 + L1MC4 LINE L1 6912 7129 -913 1691 142 25 89 chr10 34650614 34650938 -110938350 + AluJo SINE Alu 1 303 -9 1777 153 13 32 chr10 34651168 34651293 -110937995 + AluSx SINE Alu 1 127 -185 414 0 0 0 chr10 34651293 34651339 -110937949 + (CAA)n Simple_repeat Simple_repeat 2 47 0 1777 153 13 32 chr10 34651339 34651521 -110937767 + AluSx SINE Alu 127 302 -10 223 186 23 0 chr10 34651552 34651595 -110937693 + GA-rich Low_complexity Low_complexity 1 44 0 239 299 69 23 chr10 34651838 34651925 -110937363 + L2 LINE L2 2807 2897 -375 2231 109 10 0 chr10 34652232 34652525 -110936763 - AluSx SINE Alu -16 296 1 391 292 97 0 chr10 34652543 34652656 -110936632 + L2 LINE L2 3134 3257 -15 738 268 128 13 chr10 34652991 34653226 -110936062 - MIR SINE MIR 0 262 1 2245 115 0 0 chr10 34653246 34653550 -110935738 + AluSg SINE Alu 2 305 -5 29 0 0 0 chr10 34653826 34653855 -110935433 + AT_rich Low_complexity Low_complexity 1 29 0 663 207 8 0 chr10 34653856 34653977 -110935311 - FLAM_A SINE Alu -11 122 1 2145 121 124 18 chr10 34654136 34654523 -110934765 - MSTA LTR MaLR 0 428 1 533 226 29 0 chr10 34655007 34655109 -110934179 - FLAM_A SINE Alu -37 105 1 263 332 45 61 chr10 34655109 34655356 -110933932 - L2 LINE L2 -40 3273 3031 2156 186 15 5 chr10 34655363 34655755 -110933533 + MSTD LTR MaLR 1 396 0 6164 240 59 27 chr10 34655758 34656223 -110933065 + MSTD-int LTR MaLR 2 451 -1284 2063 156 8 32 chr10 34656223 34656360 -110932928 - THE1B LTR MaLR 0 364 225 2179 136 0 0 chr10 34656360 34656668 -110932620 - AluSx SINE Alu -4 308 1 2063 156 8 32 chr10 34656668 34656903 -110932385 - THE1B LTR MaLR -139 225 1 6164 240 59 27 chr10 34656903 34657428 -110931860 + MSTD-int LTR MaLR 451 958 -777 2255 114 0 3 chr10 34657428 34657725 -110931563 - AluSx SINE Alu -16 296 1 6164 240 59 27 chr10 34657725 34658414 -110930874 + MSTD-int LTR MaLR 958 1735 0 1172 121 105 0 chr10 34658414 34658604 -110930684 + MSTD LTR MaLR 1 210 -186 613 261 82 5 chr10 34659011 34659195 -110930093 - L2 LINE L2 -312 3001 2804 200 227 0 0 chr10 34660085 34660129 -110929159 + (TA)n Simple_repeat Simple_repeat 1 44 0 186 71 0 0 chr10 34660255 34660283 -110929005 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 708 323 69 32 chr10 34660690 34661037 -110928251 + L3 LINE CR1 780 1139 -438 2000 128 0 0 chr10 34661368 34661675 -110927613 - AluSx SINE Alu 0 320 14 21 36 0 0 chr10 34661675 34661703 -110927585 + AT_rich Low_complexity Low_complexity 1 28 0 564 278 33 85 chr10 34661805 34662204 -110927084 - MLT1J2 LTR MaLR -69 381 4 373 336 9 18 chr10 34662405 34662515 -110926773 - L2 LINE L2 -27 3245 3137 417 335 48 55 chr10 34662902 34663192 -110926096 + L3 LINE CR1 1237 1524 -53 2271 65 28 0 chr10 34663202 34663492 -110925796 + AluY SINE Alu 1 298 -13 30 0 0 0 chr10 34663632 34663662 -110925626 + AT_rich Low_complexity Low_complexity 1 30 0 1368 133 13 0 chr10 34663958 34664191 -110925097 - Tigger5 DNA MER2_type 0 2323 2088 707 82 62 0 chr10 34664191 34664288 -110925000 - AluY SINE Alu -208 103 1 1889 149 0 39 chr10 34664288 34664597 -110924691 - AluJo SINE Alu -15 297 1 320 370 26 7 chr10 34665034 34665188 -110924100 + MIR SINE MIR 65 221 -41 2826 3 0 3 chr10 34665263 34665572 -110923716 + AluY SINE Alu 1 308 -3 198 0 0 0 chr10 34665572 34665594 -110923694 + (TA)n Simple_repeat Simple_repeat 2 23 0 1849 142 63 6 chr10 34665698 34666029 -110923259 - L1MB2 LINE L1 -1 6239 5890 36 0 0 0 chr10 34666963 34666999 -110922289 + AT_rich Low_complexity Low_complexity 1 36 0 2095 190 29 0 chr10 34667002 34667387 -110921901 - MSTD LTR MaLR 0 396 1 2477 225 82 50 chr10 34667696 34668994 -110920294 - L1MB2 LINE L1 -450 5785 4446 1174 257 2 37 chr10 34669001 34669433 -110919855 - L1MB2 LINE L1 -2118 4097 3681 2107 108 31 3 chr10 34669450 34669737 -110919551 - AluSx SINE Alu -17 295 1 5437 236 70 37 chr10 34669746 34670929 -110918359 - L1MB2 LINE L1 -2708 3507 2365 1854 184 22 19 chr10 34670929 34671293 -110917995 - MLT1A1 LTR MaLR 0 365 1 5437 236 70 37 chr10 34671293 34671443 -110917845 - L1MB2 LINE L1 -3850 2365 2221 1998 152 7 0 chr10 34671443 34671739 -110917549 - AluSx SINE Alu -14 298 1 5437 236 70 37 chr10 34671739 34672683 -110916605 - L1MB2 LINE L1 -3994 2221 1310 212 0 36 0 chr10 34672683 34672711 -110916577 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1834 154 7 3 chr10 34672714 34672999 -110916289 - AluSx SINE Alu -24 288 3 5437 236 70 37 chr10 34672999 34674110 -110915178 - L1MB2 LINE L1 -4906 1309 35 1795 171 10 16 chr10 34674151 34674460 -110914828 - AluJo SINE Alu -5 307 1 273 346 123 43 chr10 34674548 34674710 -110914578 - L2 LINE L2 0 3272 3098 2211 82 0 0 chr10 34675161 34675443 -110913845 - AluY SINE Alu -29 282 1 302 336 56 8 chr10 34675969 34676094 -110913194 + L2 LINE L2 3137 3267 -5 2472 70 7 0 chr10 34676204 34676502 -110912786 - AluSx SINE Alu -12 300 1 26 30 0 0 chr10 34676563 34676596 -110912692 + AT_rich Low_complexity Low_complexity 1 33 0 357 345 31 18 chr10 34676757 34676983 -110912305 - L1MC4a LINE L1 -1940 5868 5640 820 152 0 51 chr10 34677040 34677178 -110912110 + AluSq/x SINE Alu 1 131 -181 26 30 0 0 chr10 34677313 34677346 -110911942 + AT_rich Low_complexity Low_complexity 1 33 0 2320 110 0 0 chr10 34677406 34677706 -110911582 + AluSx SINE Alu 1 300 -12 301 327 19 0 chr10 34677706 34677832 -110911456 - L1MC4a LINE L1 -535 5586 5460 24 0 0 0 chr10 34677853 34677877 -110911411 + AT_rich Low_complexity Low_complexity 1 24 0 732 289 92 33 chr10 34677877 34678518 -110910770 - L1MC4a LINE L1 -650 5471 4762 7420 175 10 15 chr10 34678528 34680976 -110908312 - L1MA7 LINE L1 0 6291 3899 2179 123 0 19 chr10 34680976 34681294 -110907994 - AluJb SINE Alu 0 312 1 7420 175 10 15 chr10 34681294 34681511 -110907777 - L1MA7 LINE L1 -2392 3899 3682 13965 136 22 25 chr10 34681545 34681726 -110907562 - Tigger1 DNA MER2_type 0 2418 2238 2282 115 0 13 chr10 34681726 34682039 -110907249 + AluSx SINE Alu 1 309 -3 13965 136 22 25 chr10 34682039 34682807 -110906481 - Tigger1 DNA MER2_type -180 2238 1470 2298 85 7 26 chr10 34682807 34683113 -110906175 - AluSp SINE Alu -13 300 1 13965 136 22 25 chr10 34683113 34683626 -110905662 - Tigger1 DNA MER2_type -948 1470 957 1790 188 0 25 chr10 34683626 34683946 -110905342 + AluJo SINE Alu 1 312 0 13965 136 22 25 chr10 34683946 34684905 -110904383 - Tigger1 DNA MER2_type -1461 957 1 1226 271 44 7 chr10 34685051 34685461 -110903827 - L1ME1 LINE L1 -2 6164 5740 306 219 62 47 chr10 34685478 34685606 -110903682 - L1ME1 LINE L1 -1001 5145 5016 678 307 72 20 chr10 34685626 34685975 -110903313 - LTR16B LTR ERVL 0 464 98 355 301 58 33 chr10 34686177 34686580 -110902708 - HERV16 LTR ERVL -306 4690 4568 * 1460 353 38 15 chr10 34686575 34687515 -110901773 - HERV16 LTR ERVL -1314 4340 3379 2389 74 0 3 chr10 34687516 34687813 -110901475 - AluY SINE Alu -15 296 1 701 308 45 50 chr10 34687830 34687985 -110901303 + HERVL LTR ERVL 2794 2948 -2706 808 221 97 9 chr10 34687985 34688202 -110901086 - MER106A DNA MER1_type 0 236 1 701 308 45 50 chr10 34688202 34688468 -110900820 + HERVL LTR ERVL 2948 3213 -2441 459 205 128 0 chr10 34688482 34688599 -110900689 + MER96 DNA MER1_type? 44 175 0 288 143 0 0 chr10 34688663 34688719 -110900569 - L1M4 LINE L1 -1090 5056 5001 1404 244 103 19 chr10 34688739 34689214 -110900074 + LTR40a LTR ERVL 1 515 -4 1165 272 93 72 chr10 34689219 34689778 -110899510 + HERVL40 LTR ERVL 1 571 -4959 591 253 88 53 chr10 34689933 34690143 -110899145 + HERVL40 LTR ERVL 2153 2189 -848 210 37 0 0 chr10 34690143 34690170 -110899118 + (GA)n Simple_repeat Simple_repeat 2 28 0 591 253 88 53 chr10 34690170 34690337 -110898951 + HERVL40 LTR ERVL 2189 2349 -688 1030 231 15 0 chr10 34690782 34691055 -110898233 - L1M4 LINE L1 -1420 4726 4450 2420 251 24 30 chr10 34691058 34691816 -110897472 - L1MEc LINE L1 -5610 786 34 274 167 0 19 chr10 34691820 34691874 -110897414 - L1MEc LINE L1 -6317 79 27 1233 243 56 42 chr10 34691914 34692487 -110896801 - L1ME1 LINE L1 -1137 5009 4429 971 223 45 0 chr10 34692480 34692722 -110896566 - L1ME1 LINE L1 -1926 4220 3968 * 240 188 141 70 chr10 34693243 34693304 -110895984 - L1ME3A LINE L1 -7 6163 6108 2360 96 3 0 chr10 34693304 34693606 -110895682 - AluSx SINE Alu -9 303 1 240 188 141 70 chr10 34693606 34693672 -110895616 - L1ME3A LINE L1 -62 6108 6027 292 191 59 29 chr10 34693716 34693784 -110895504 - MER63 DNA MER1_type -1 1060 991 25 0 0 0 chr10 34693970 34693995 -110895293 + AT_rich Low_complexity Low_complexity 1 25 0 248 294 15 0 chr10 34695162 34695230 -110894058 + MIR SINE MIR 147 215 -47 497 118 0 11 chr10 34695338 34695431 -110893857 + (TCCC)n Simple_repeat Simple_repeat 3 94 0 844 276 104 32 chr10 34695464 34695869 -110893419 + L2 LINE L2 1659 2092 -1222 2172 107 3 7 chr10 34696071 34696369 -110892919 + AluSq SINE Alu 1 297 -16 35 0 0 0 chr10 34696748 34696783 -110892505 + AT_rich Low_complexity Low_complexity 1 35 0 2134 126 3 3 chr10 34697629 34697939 -110891349 - AluSg SINE Alu 0 310 1 1942 183 11 19 chr10 34698138 34698504 -110890784 + MLT1A1 LTR MaLR 3 365 0 1048 200 24 13 chr10 34698504 34698918 -110890370 - MLT1C LTR MaLR -12 455 1 377 226 23 66 chr10 34699600 34699762 -110889526 + MIR SINE MIR 4 161 -65 2263 186 110 4 chr10 34700395 34700894 -110888394 - MER68 LTR ERV1 0 562 11 2111 132 3 0 chr10 34700915 34701210 -110888078 - AluSx SINE Alu -16 296 1 32 43 0 0 chr10 34701719 34701765 -110887523 + AT_rich Low_complexity Low_complexity 1 46 0 29 0 0 0 chr10 34701945 34701974 -110887314 + AT_rich Low_complexity Low_complexity 1 29 0 2378 237 25 16 chr10 34702104 34702738 -110886550 + L1ME1 LINE L1 5445 6084 -82 1229 111 21 0 chr10 34702851 34703041 -110886247 + L1PA16 LINE L1 5970 6163 -3 1371 302 71 28 chr10 34703120 34703626 -110885662 + L2 LINE L2 708 1235 -2079 297 0 0 0 chr10 34703733 34703766 -110885522 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 1988 139 0 7 chr10 34703768 34704070 -110885218 - AluSx SINE Alu -12 300 1 27 29 0 0 chr10 34704923 34704957 -110884331 + AT_rich Low_complexity Low_complexity 1 34 0 5166 159 20 28 chr10 34705320 34706890 -110882398 - L1MA5 LINE L1 -6 6294 4743 267 79 0 0 chr10 34706897 34706935 -110882353 + (TG)n Simple_repeat Simple_repeat 1 38 0 1135 146 0 27 chr10 34706936 34707121 -110882167 - AluJo SINE Alu -14 298 119 1539 188 23 50 chr10 34707121 34707700 -110881588 - L1M4 LINE L1 -1413 4733 4194 335 313 49 6 chr10 34707905 34708068 -110881220 - L1M4 LINE L1 -6282 260 91 243 0 0 0 chr10 34708100 34708127 -110881161 + (T)n Simple_repeat Simple_repeat 1 27 0 358 320 24 36 chr10 34708141 34708394 -110880894 + L1M4 LINE L1 4598 4847 -1299 716 209 27 32 chr10 34709202 34709389 -110879899 - MER5A DNA MER1_type -1 188 3 1748 141 0 3 chr10 34709613 34709904 -110879384 - MER47A DNA MER2_type -2 364 75 312 276 0 31 chr10 34710153 34710231 -110879057 - L1MC4 LINE L1 -1340 6702 6626 2485 75 0 0 chr10 34710231 34710525 -110878763 - AluSp SINE Alu -19 294 1 312 276 0 31 chr10 34710525 34710544 -110878744 - L1MC4 LINE L1 -1416 6626 6608 1521 188 36 14 chr10 34710600 34710876 -110878412 + AluJo SINE Alu 1 282 -30 28 29 0 0 chr10 34710894 34710929 -110878359 + AT_rich Low_complexity Low_complexity 1 35 0 426 321 117 0 chr10 34712542 34712738 -110876550 + L2 LINE L2 692 910 -2404 269 344 29 48 chr10 34712788 34712950 -110876338 + L2 LINE L2 1428 1587 -1727 1635 169 7 17 chr10 34712950 34713264 -110876024 - AluJb SINE Alu 0 311 1 269 344 29 48 chr10 34713264 34713372 -110875916 + L2 LINE L2 1587 1695 -1619 1071 345 95 16 chr10 34713780 34714519 -110874769 + L2 LINE L2 1815 2611 -703 3265 109 0 6 chr10 34714717 34715196 -110874092 - L1PA14 LINE L1 0 6161 5686 23379 53 10 2 chr10 34715312 34718990 -110870298 + L1PA5 LINE L1 2174 5874 -280 16300 67 9 6 chr10 34719090 34721424 -110867864 - L1P LINE L1 -2819 3327 988 17010 56 18 0 chr10 34721526 34723824 -110865464 + L1P LINE L1 437 2775 -3371 2003 81 44 7 chr10 34723824 34724096 -110865192 + AluY SINE Alu 1 282 -29 2956 153 40 13 chr10 34724196 34724988 -110864300 - L1M2 LINE L1 -697 5594 4783 18422 58 7 3 chr10 34725005 34728203 -110861085 - L1PA7 LINE L1 -13 6141 2934 6405 153 9 15 chr10 34728303 34728646 -110860642 - L1P4 LINE L1 -504 5664 5321 2164 92 7 36 chr10 34728646 34728951 -110860337 - AluSx SINE Alu -16 296 1 6405 153 9 15 chr10 34728951 34730187 -110859101 - L1P4 LINE L1 -847 5321 4086 213 367 112 24 chr10 34730191 34730360 -110858928 + MER5A DNA MER1_type 2 185 -4 798 231 77 118 chr10 34730696 34731504 -110857784 - LTR41 LTR ERVL 0 795 8 407 224 172 0 chr10 34732929 34733045 -110856243 - MER3 DNA MER1_type 0 209 74 764 274 39 47 chr10 34733448 34733703 -110855585 - MIR SINE MIR -4 258 6 22 70 0 0 chr10 34734085 34734128 -110855160 + AT_rich Low_complexity Low_complexity 1 43 0 1736 170 7 10 chr10 34734128 34734434 -110854854 - AluJo SINE Alu -6 306 2 2381 80 6 46 chr10 34735751 34736076 -110853212 - AluSx SINE Alu 0 312 1 480 243 88 17 chr10 34736814 34736995 -110852293 - L1MEc LINE L1 -6167 229 36 6314 203 45 25 chr10 34737427 34738754 -110850534 - L1MC2 LINE L1 -9 6335 5036 2227 80 25 0 chr10 34738754 34739040 -110850248 - AluSg SINE Alu -17 293 1 6314 203 45 25 chr10 34739040 34740693 -110848595 - L1MC2 LINE L1 -1308 5036 3295 6415 189 56 81 chr10 34740697 34741856 -110847432 - L1 LINE L1 -1932 4450 3264 195 42 0 0 chr10 34741856 34741880 -110847408 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 808 221 7 0 chr10 34741880 34742025 -110847263 - FRAM SINE Alu -30 146 1 6415 189 56 81 chr10 34742025 34742951 -110846337 - L1 LINE L1 -3116 3266 2272 1557 253 64 58 chr10 34742959 34743746 -110845542 - L1 LINE L1 -4299 2083 1219 761 139 0 0 chr10 34743746 34743868 -110845420 - L1PB4 LINE L1 -7 6149 6028 1557 253 64 58 chr10 34743868 34744067 -110845221 - L1 LINE L1 -5163 1219 1023 * 40668 51 4 1 chr10 34744038 34750173 -110839115 - L1PA4 LINE L1 -1 6390 237 848 154 11 6 chr10 34750174 34750349 -110838939 - L1M3c LINE L1 -4835 2263 2088 415 325 19 24 chr10 34750350 34750562 -110838726 - L1M3c LINE L1 -5221 1947 1737 257 323 32 25 chr10 34751707 34751865 -110837423 - L1M3c LINE L1 -5981 1117 959 2406 61 0 7 chr10 34752054 34752349 -110836939 + AluY SINE Alu 1 293 -18 324 309 149 11 chr10 34753132 34753307 -110835981 + MIR SINE MIR 61 259 -3 22 35 0 0 chr10 34753557 34753586 -110835702 + AT_rich Low_complexity Low_complexity 1 29 0 3316 144 29 15 chr10 34753784 34754402 -110834886 + L1MB2 LINE L1 5544 6170 -1 4134 156 76 32 chr10 34754485 34755931 -110833357 - L1MA7 LINE L1 0 6291 4783 26787 78 7 3 chr10 34755939 34760643 -110828645 - L1PA7 LINE L1 -3 6151 1433 9804 62 4 78 chr10 34761138 34762580 -110826708 - SVA Other Other 0 1386 52 234 0 0 0 chr10 34762580 34762606 -110826682 + (GGGAGA)n Simple_repeat Simple_repeat 1 26 0 5868 130 53 23 chr10 34762606 34764052 -110825236 - L1PA7 LINE L1 -4686 1460 13 9691 190 40 41 chr10 34764058 34765655 -110823633 - L1MA7 LINE L1 -1351 4795 3198 2414 71 14 0 chr10 34765655 34765952 -110823336 - AluY SINE Alu -10 301 1 9691 190 40 41 chr10 34765952 34766708 -110822580 - L1MA7 LINE L1 -2948 3198 2443 254 25 0 50 chr10 34766708 34766748 -110822540 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 7261 71 12 213 chr10 34766748 34768393 -110820895 - SVA Other Other -23 1363 51 180 0 0 0 chr10 34768396 34768416 -110820872 + (GGGAGA)n Simple_repeat Simple_repeat 1 20 0 9691 190 40 41 chr10 34768416 34768573 -110820715 - L1MA7 LINE L1 -3704 2442 2286 2122 74 0 0 chr10 34768573 34768830 -110820458 - AluSc SINE Alu -52 257 1 9691 190 40 41 chr10 34768830 34768995 -110820293 - L1MA7 LINE L1 -3860 2286 2116 2055 137 3 0 chr10 34768997 34769289 -110819999 - AluSx SINE Alu -19 293 1 3204 177 40 52 chr10 34769303 34770156 -110819132 + L1MA10 LINE L1 3875 4717 -1429 2221 97 0 32 chr10 34770162 34770471 -110818817 - AluSx SINE Alu -12 300 2 1000 112 0 0 chr10 34770472 34770606 -110818682 - AluSx SINE Alu -10 302 169 471 145 0 0 chr10 34770606 34770675 -110818613 - AluSx SINE Alu -244 69 1 2993 209 94 28 chr10 34770678 34772155 -110817133 + L1MA10 LINE L1 4722 6298 -36 23 0 0 0 chr10 34772630 34772653 -110816635 + AT_rich Low_complexity Low_complexity 1 23 0 419 283 134 24 chr10 34774054 34774671 -110814617 + L1ME LINE L1 4932 5712 -458 6676 208 41 24 chr10 34774735 34775725 -110813563 + L1MC4a LINE L1 3330 4302 -1876 1712 224 58 13 chr10 34775725 34776172 -110813116 + MLT1C LTR MaLR 1 467 0 6676 208 41 24 chr10 34776172 34776363 -110812925 + L1MC4a LINE L1 4302 4488 -1690 1716 162 17 26 chr10 34776363 34776665 -110812623 - AluJo SINE Alu -13 299 1 6676 208 41 24 chr10 34776665 34777080 -110812208 + L1MC4a LINE L1 4488 4894 -1284 2357 70 13 0 chr10 34777080 34777378 -110811910 - AluY SINE Alu -9 302 1 6676 208 41 24 chr10 34777378 34777826 -110811462 + L1MC4a LINE L1 4894 5333 -845 2266 110 0 0 chr10 34777826 34778127 -110811161 - AluSx SINE Alu -11 301 1 6676 208 41 24 chr10 34778127 34778522 -110810766 + L1MC4a LINE L1 5333 5815 -363 323 283 7 3 chr10 34778597 34778747 -110810541 + MER58A DNA MER1_type 6 203 -21 368 272 59 15 chr10 34778756 34778892 -110810396 + L1MC4a LINE L1 5792 5933 -1875 1896 26 0 13 chr10 34779089 34779321 -110809967 + L1PA4 LINE L1 5924 6152 -3 18926 165 42 11 chr10 34781125 34784803 -110804485 - L1MA2 LINE L1 0 7723 4159 2070 123 0 10 chr10 34784803 34785103 -110804185 + AluSx SINE Alu 1 297 -15 18926 165 42 11 chr10 34785103 34786640 -110802648 - L1MA2 LINE L1 -3564 4159 2670 1182 64 6 0 chr10 34786640 34786797 -110802491 + L1PA6 LINE L1 5997 6154 0 18926 165 42 11 chr10 34786797 34789042 -110800246 - L1MA2 LINE L1 -5053 2670 19 254 250 69 9 chr10 34789404 34789416 -110799872 - L1MA5 LINE L1 0 6300 6289 12470 186 35 46 chr10 34789416 34789801 -110799487 - L1PB4 LINE L1 0 6858 6470 2622 73 20 6 chr10 34789801 34790159 -110799129 - L1PB1 LINE L1 0 6151 5789 12470 186 35 46 chr10 34790159 34790543 -110798745 - L1PB4 LINE L1 -388 6470 6083 228 35 0 0 chr10 34790543 34790572 -110798716 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2023 127 3 3 chr10 34790575 34790859 -110798429 - AluSg SINE Alu -26 284 1 12470 186 35 46 chr10 34790859 34792668 -110796620 - L1PB4 LINE L1 -777 6081 4253 1724 200 0 3 chr10 34792668 34792963 -110796325 - AluJb SINE Alu -18 294 1 12470 186 35 46 chr10 34792963 34794786 -110794502 - L1PB4 LINE L1 -2605 4253 2551 297 0 0 0 chr10 34794786 34794819 -110794469 + (CA)n Simple_repeat Simple_repeat 2 34 0 12470 186 35 46 chr10 34794819 34796754 -110792534 - L1PB4 LINE L1 -4307 2551 595 3325 166 79 56 chr10 34796874 34797608 -110791680 - MER4E LTR ERV1 -26 753 3 785 288 43 43 chr10 34797671 34798046 -110791242 + LTR38 LTR ERV1 129 503 -53 15798 185 54 19 chr10 34798053 34802641 -110786647 - L1PA15 LINE L1 -11 6154 1407 352 330 48 9 chr10 34803423 34803653 -110785635 - L1PB4 LINE L1 -6599 250 12 2342 96 0 3 chr10 34803890 34804193 -110785095 + AluSx SINE Alu 1 302 -10 21 0 0 0 chr10 34804442 34804463 -110784825 + AT_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr10 34805417 34805439 -110783849 + AT_rich Low_complexity Low_complexity 1 22 0 213 108 0 0 chr10 34805942 34805979 -110783309 + (TG)n Simple_repeat Simple_repeat 2 38 0 187 344 0 16 chr10 34806154 34806218 -110783070 + MIR SINE MIR 69 131 -131 2120 128 0 0 chr10 34807163 34807468 -110781820 + AluSx SINE Alu 1 305 -7 1279 238 102 83 chr10 34808192 34808579 -110780709 - MLT1E1 LTR MaLR -1 653 248 1590 178 3 31 chr10 34808579 34808866 -110780422 - AluJo SINE Alu -33 279 1 1279 238 102 83 chr10 34808866 34809116 -110780172 - MLT1E1 LTR MaLR -406 248 4 26 39 0 20 chr10 34809119 34809142 -110780146 + AT_rich Low_complexity Low_complexity 1 23 -27 1219 86 6 0 chr10 34809142 34809316 -110779972 - L1MA3 LINE L1 -1 6304 6130 26 39 0 20 chr10 34809316 34809343 -110779945 + AT_rich Low_complexity Low_complexity 23 50 0 1457 132 0 0 chr10 34809343 34809570 -110779718 - L1PB1 LINE L1 -8 6859 6633 3242 133 18 36 chr10 34809585 34810141 -110779147 - LTR10A LTR ERV1 -63 546 1 15146 187 22 4 chr10 34810185 34815307 -110773981 - L1PB1 LINE L1 -230 6637 1427 450 141 0 0 chr10 34815324 34815395 -110773893 - L1PB1 LINE L1 -5700 1163 1093 2674 243 72 14 chr10 34815397 34816283 -110773005 - L1PB1 LINE L1 -5816 1047 110 * 3396 108 40 6 chr10 34816260 34816788 -110772500 - L1MA3 LINE L1 -160 6861 6316 2261 102 0 0 chr10 34816789 34817083 -110772205 - AluSc SINE Alu -15 294 1 290 245 63 31 chr10 34817280 34817432 -110771856 - MLT1H LTR MaLR 0 586 428 545 282 60 34 chr10 34817432 34817666 -110771622 - MLT1H LTR MaLR -227 322 83 390 268 71 24 chr10 34817789 34817957 -110771331 - MLT1J LTR MaLR -2 509 334 2154 269 61 40 chr10 34818721 34819235 -110770053 - L1ME LINE L1 -4715 1365 863 1532 180 14 32 chr10 34819235 34819518 -110769770 - AluJo SINE Alu -20 292 15 2154 269 61 40 chr10 34819518 34820215 -110769073 - L1ME LINE L1 -5217 863 129 43913 36 6 3 chr10 34820217 34826354 -110762934 + L1PA3 LINE L1 1 6154 -1 843 173 12 36 chr10 34826365 34826533 -110762755 + FRAM SINE Alu 1 161 -15 359 261 130 0 chr10 34826545 34826660 -110762628 - L1ME LINE L1 -5935 135 6 22 0 0 0 chr10 34827315 34827337 -110761951 + AT_rich Low_complexity Low_complexity 1 22 0 404 305 102 28 chr10 34827783 34828147 -110761141 + L1ME4a LINE L1 5533 5923 -198 1314 181 0 9 chr10 34828168 34828394 -110760894 + AluJb SINE Alu 1 224 -88 233 167 56 0 chr10 34828408 34828534 -110760754 + (TA)n Simple_repeat Simple_repeat 1 133 0 224 40 80 0 chr10 34828581 34828631 -110760657 + (TA)n Simple_repeat Simple_repeat 2 55 0 2357 87 0 0 chr10 34829546 34829844 -110759444 - AluSc SINE Alu -11 298 1 215 284 177 21 chr10 34830288 34830429 -110758859 - MIR SINE MIR -71 191 29 2269 122 0 3 chr10 34830955 34831267 -110758021 - AluSq SINE Alu -2 311 1 225 121 0 0 chr10 34831345 34831378 -110757910 - L1PA7 LINE L1 -12 6142 6110 423 334 132 31 chr10 34831393 34831839 -110757449 + L2 LINE L2 2026 2516 -798 885 303 102 25 chr10 34831986 34832379 -110756909 - MLT1J1 LTR MaLR -23 423 1 2199 93 10 20 chr10 34832546 34832848 -110756440 - AluSx SINE Alu -13 299 1 250 216 40 27 chr10 34833062 34833136 -110756152 + MER41B LTR ERV1 478 552 -83 31 26 0 0 chr10 34833611 34833649 -110755639 + AT_rich Low_complexity Low_complexity 1 38 0 2399 90 0 3 chr10 34834406 34834717 -110754571 - AluSq SINE Alu -3 310 1 392 333 22 15 chr10 34835353 34835488 -110753800 - L2 LINE L2 -15 3257 3122 194 93 0 47 chr10 34835845 34835888 -110753400 + (TTATA)n Simple_repeat Simple_repeat 4 44 0 351 320 101 28 chr10 34836464 34836711 -110752577 - L2 LINE L2 -4 3309 3045 1360 221 0 0 chr10 34838087 34838354 -110750934 - AluJb SINE Alu -9 303 37 2023 100 44 4 chr10 34838620 34838913 -110750375 + AluSg SINE Alu 1 304 0 3562 132 11 4 chr10 34839810 34840333 -110748955 - MER1A DNA MER1_type 0 527 1 632 237 79 0 chr10 34841077 34841229 -110748059 - MER68 LTR ERV1 0 562 399 389 321 76 43 chr10 34841678 34841955 -110747333 - L3b LINE CR1 -196 1387 1102 393 141 0 0 chr10 34842944 34843015 -110746273 + (TCC)n Simple_repeat Simple_repeat 3 73 0 306 0 0 0 chr10 34843646 34843680 -110745608 + (TA)n Simple_repeat Simple_repeat 1 34 0 2417 83 10 0 chr10 34846015 34846317 -110742971 + AluSg SINE Alu 1 305 -5 2514 58 0 0 chr10 34846617 34846912 -110742376 - AluY SINE Alu -16 295 1 7028 56 1 1 chr10 34846915 34848391 -110740897 - L1PA7 LINE L1 -2 6152 4678 836 111 52 52 chr10 34848596 34848768 -110740520 - L1MB4 LINE L1 -15 6165 5994 1845 201 48 16 chr10 34848768 34849142 -110740146 - MSTD LTR MaLR -10 386 1 2738 228 41 21 chr10 34849151 34849410 -110739878 - L1M4c LINE L1 -1842 4802 4550 1763 168 103 28 chr10 34849410 34849808 -110739480 + MSTC LTR MaLR 1 428 0 2738 228 41 21 chr10 34849808 34850393 -110738895 - L1M4c LINE L1 -2094 4550 3941 3576 89 44 12 chr10 34850413 34850976 -110738312 - L1MA3 LINE L1 -7 6298 5718 7865 130 27 41 chr10 34850982 34851859 -110737429 - L1M4 LINE L1 -3382 4183 3295 186 103 0 0 chr10 34851859 34851888 -110737400 + (CAA)n Simple_repeat Simple_repeat 2 30 0 7865 130 27 41 chr10 34851888 34852909 -110736379 - L1M4 LINE L1 -4270 3295 2306 1109 77 53 68 chr10 34853011 34853218 -110736070 + L1M1 LINE L1 3266 3469 -4096 * 1599 171 30 0 chr10 34853211 34853475 -110735813 - L1M4 LINE L1 -6195 1370 1099 650 134 42 8 chr10 34853472 34853591 -110735697 - L1M4 LINE L1 -7432 133 11 * 1189 220 84 21 chr10 34853593 34854106 -110735182 - L1M4c LINE L1 -2687 4878 4334 * 39067 75 14 2 chr10 34854095 34860167 -110729121 - L1PA5 LINE L1 -6 6148 2 2463 233 70 28 chr10 34860171 34861201 -110728087 - L1P LINE L1 -1103 5279 4293 835 167 13 13 chr10 34861201 34861357 -110727931 - L1PB3 LINE L1 -2 6152 5997 2463 233 70 28 chr10 34861357 34862127 -110727161 - L1P LINE L1 -2089 4293 2132 1647 223 52 9 chr10 34862127 34862650 -110726638 - L1M4c LINE L1 -4252 3315 2674 1725 147 8 0 chr10 34862658 34862910 -110726378 - AluSx SINE Alu -58 254 1 372 242 38 32 chr10 34862918 34863075 -110726213 - L1M4c LINE L1 -6380 1083 926 6126 64 7 75 chr10 34863075 34863962 -110725326 + LTR12 LTR ERV1 1 826 0 317 202 58 39 chr10 34863962 34864066 -110725222 - L1M4c LINE L1 -6435 1028 923 25 0 0 0 chr10 34864122 34864147 -110725141 + AT_rich Low_complexity Low_complexity 1 25 0 577 241 133 0 chr10 34864169 34864327 -110724961 + MIR SINE MIR 53 231 -31 13032 190 38 14 chr10 34864367 34866484 -110722804 - L1MA4A LINE L1 -12 6291 4224 1952 185 83 5 chr10 34866484 34866879 -110722409 + MSTB LTR MaLR 1 426 0 9146 154 45 4 chr10 34866879 34867383 -110721905 + MSTB-int LTR MaLR 1 483 -1168 198 0 0 0 chr10 34867383 34867405 -110721883 + (GAAAA)n Simple_repeat Simple_repeat 5 26 0 9146 154 45 4 chr10 34867405 34868486 -110720802 + MSTB-int LTR MaLR 483 1651 0 2197 176 60 2 chr10 34868486 34868889 -110720399 + MSTB LTR MaLR 1 426 0 13032 190 38 14 chr10 34868889 34870079 -110719209 - L1MA4A LINE L1 -2079 4224 2866 2028 133 3 0 chr10 34870079 34870380 -110718908 - AluSx SINE Alu -7 305 4 13032 190 38 14 chr10 34870380 34871140 -110718148 - L1MA4A LINE L1 -3437 2866 2125 1913 120 25 0 chr10 34871142 34871425 -110717863 + MSTA LTR MaLR 1 290 -138 596 276 0 0 chr10 34871418 34871545 -110717743 - Tigger7 DNA MER2_type -275 275 149 * 297 109 0 0 chr10 34871553 34871599 -110717689 + (TG)n Simple_repeat Simple_repeat 1 46 0 2486 72 0 0 chr10 34871642 34871946 -110717342 - AluY SINE Alu -7 304 1 22286 89 11 15 chr10 34871971 34876079 -110713209 - L1PA7 LINE L1 -7 6147 2059 581 177 146 0 chr10 34876084 34876214 -110713074 - L1PB4 LINE L1 -28 6128 5980 325 315 110 7 chr10 34876220 34876366 -110712922 + L1M4 LINE L1 1296 1456 -5753 6390 222 102 35 chr10 34876368 34880644 -110708644 - L1PB4 LINE L1 -180 6679 1979 267 274 44 22 chr10 34880793 34880928 -110708360 + L1M4 LINE L1 5274 5411 -1797 22 0 0 0 chr10 34881009 34881031 -110708257 + AT_rich Low_complexity Low_complexity 1 22 0 259 233 68 0 chr10 34881145 34881218 -110708070 + L1M4 LINE L1 5817 5894 -1314 1239 150 5 45 chr10 34881218 34881438 -110707850 - AluJo SINE Alu -101 211 1 2208 133 0 0 chr10 34881450 34881751 -110707537 - AluSx SINE Alu -11 301 1 403 271 25 8 chr10 34882567 34882689 -110706599 - MER94 DNA DNA -10 124 1 2505 140 30 137 chr10 34882942 34883519 -110705769 - MLT2B2 LTR ERVL 0 515 1 1024 209 43 0 chr10 34884105 34884315 -110704973 - MER20 DNA MER1_type 0 219 1 30 69 0 0 chr10 34884365 34884423 -110704865 + AT_rich Low_complexity Low_complexity 1 58 0 * 316 235 3 26 chr10 34884403 34884498 -110704790 + L1M4 LINE L1 3781 3874 -2272 788 271 77 77 chr10 34885073 34885159 -110704129 + L2 LINE L2 2359 2444 -870 2193 182 32 7 chr10 34885159 34885571 -110703717 - MSTB LTR MaLR -4 422 1 788 271 77 77 chr10 34885571 34885872 -110703416 + L2 LINE L2 2443 2746 -568 273 273 50 10 chr10 34886085 34886184 -110703104 - MLT1J LTR MaLR -73 438 336 1844 218 57 55 chr10 34886285 34886901 -110702387 - L1 LINE L1 -746 5400 4784 22 0 0 0 chr10 34886901 34886923 -110702365 + AT_rich Low_complexity Low_complexity 1 22 0 30 0 0 0 chr10 34886952 34886982 -110702306 + AT_rich Low_complexity Low_complexity 1 30 0 12722 193 39 12 chr10 34886982 34890862 -110698426 - L1MA7 LINE L1 0 6877 2894 836 299 26 15 chr10 34890859 34891130 -110698158 - L1MA7 LINE L1 -5465 1188 915 * 226 344 11 11 chr10 34891343 34891433 -110697855 - L1MA7 LINE L1 -6283 370 281 738 292 164 31 chr10 34891448 34891801 -110697487 - L1M3de LINE L1 -5634 1019 620 265 200 40 0 chr10 34891807 34891882 -110697406 + L1MC4 LINE L1 6624 6701 -1341 682 287 58 0 chr10 34892041 34892264 -110697024 + L1 LINE L1 2478 2713 -3433 539 251 271 40 chr10 34892350 34892653 -110696635 + MLT1G LTR MaLR 14 386 -204 3218 230 96 39 chr10 34892653 34893878 -110695410 - L1MEc LINE L1 -962 5253 3960 1604 240 33 52 chr10 34893945 34894586 -110694702 - L1MEc LINE L1 -2991 3224 2596 357 197 0 0 chr10 34894599 34894665 -110694623 - MER76 LTR ERV -622 66 1 246 105 0 0 chr10 34894732 34894770 -110694518 + (CA)n Simple_repeat Simple_repeat 1 38 0 571 292 21 21 chr10 34894793 34895033 -110694255 - L1MC4a LINE L1 -1192 6616 6377 414 185 0 0 chr10 34895199 34895280 -110694008 + (TG)n Simple_repeat Simple_repeat 2 82 0 242 242 133 76 chr10 34895285 34895587 -110693701 - L1MC4a LINE L1 -1637 6171 5853 2301 104 0 0 chr10 34895924 34896221 -110693067 - AluSg SINE Alu -13 297 1 23 54 0 0 chr10 34896697 34896734 -110692554 + AT_rich Low_complexity Low_complexity 1 37 0 290 312 26 11 chr10 34896816 34897005 -110692283 - L1MEc LINE L1 -3572 2643 2452 520 191 0 0 chr10 34897050 34897139 -110692149 + FLAM_C SINE Alu 22 110 -33 203 0 68 45 chr10 34897150 34897194 -110692094 + (CAAAA)n Simple_repeat Simple_repeat 2 46 0 239 272 75 43 chr10 34897199 34897453 -110691835 - L1MEc LINE L1 -3937 2459 2198 41320 48 6 27 chr10 34897755 34901156 -110688132 - L1PA4 LINE L1 0 6155 2942 2132 77 42 7 chr10 34901156 34901443 -110687845 - AluY SINE Alu -14 297 1 41320 48 6 27 chr10 34901443 34904321 -110684967 - L1PA4 LINE L1 -3213 2942 7 27 0 0 0 chr10 34904452 34904479 -110684809 + AT_rich Low_complexity Low_complexity 1 27 0 552 293 53 33 chr10 34904607 34905058 -110684230 - L1M4 LINE L1 -3570 2576 2117 33 73 0 0 chr10 34905352 34905420 -110683868 + AT_rich Low_complexity Low_complexity 1 68 0 2308 179 30 18 chr10 34905581 34906065 -110683223 - L1MA6 LINE L1 0 6300 5808 1822 163 25 31 chr10 34906065 34906422 -110682866 + THE1A LTR MaLR 1 355 0 2308 179 30 18 chr10 34906422 34906440 -110682848 - L1MA6 LINE L1 -492 5808 5792 641 89 0 11 chr10 34906440 34906530 -110682758 + MSTA LTR MaLR 340 428 0 1519 150 11 4 chr10 34906530 34906803 -110682485 + L1M1 LINE L1 5308 5582 -721 * 5280 198 22 18 chr10 34906794 34908090 -110681198 - L1 LINE L1 -2250 3896 2596 5137 137 12 0 chr10 34908093 34908741 -110680547 - L1PA16 LINE L1 -1 6165 5526 1860 155 0 10 chr10 34908741 34909037 -110680251 + AluSx SINE Alu 1 293 -19 5137 137 12 0 chr10 34909037 34910016 -110679272 - L1PA16 LINE L1 -640 5526 4537 2908 93 7 14 chr10 34910017 34910436 -110678852 - L1PA11 LINE L1 -457 5717 5302 3116 116 17 4 chr10 34910436 34910906 -110678382 + L1PA11 LINE L1 5694 6174 0 3150 247 26 13 chr10 34910906 34911969 -110677319 - L1PA12 LINE L1 -4313 3271 2182 243 368 11 0 chr10 34912216 34912311 -110676977 - L1PA12 LINE L1 -5401 2180 2085 779 346 48 46 chr10 34912434 34913043 -110676245 - L1PA12 LINE L1 -6177 1397 788 3323 98 8 0 chr10 34913048 34913530 -110675758 - LTR19A LTR ERV1 0 486 1 2878 219 46 11 chr10 34913538 34914717 -110674571 - L1 LINE L1 -3537 4028 2804 1167 242 89 58 chr10 34914731 34915193 -110674095 - L1 LINE L1 -7069 496 21 4858 238 44 33 chr10 34915348 34916842 -110672446 - L1M4 LINE L1 -4839 2624 1114 1579 178 45 32 chr10 34916878 34917092 -110672196 - L1M2 LINE L1 -739 5573 5363 1846 142 0 62 chr10 34917092 34917416 -110671872 - AluSx SINE Alu -8 304 1 1579 178 45 32 chr10 34917416 34917735 -110671553 - L1M2 LINE L1 -949 5363 5024 1806 148 21 33 chr10 34917744 34917915 -110671373 + L1MA9 LINE L1 5579 5751 -561 2432 109 25 0 chr10 34917915 34918281 -110671007 - THE1C LTR MaLR 0 375 1 10278 109 43 8 chr10 34918281 34919808 -110669480 - THE1C-int LTR MaLR 0 1580 1 2351 145 11 3 chr10 34919808 34920180 -110669108 - THE1C LTR MaLR 0 375 1 1806 148 21 33 chr10 34920180 34920343 -110668945 + L1MA9 LINE L1 5748 5911 -401 * 2498 196 53 16 chr10 34920341 34921024 -110668264 - L1M2 LINE L1 -2714 3432 2725 699 148 26 0 chr10 34921029 34921144 -110668144 - Tigger1 DNA MER2_type -1 2417 2300 2785 111 13 29 chr10 34921148 34921600 -110667688 + L1P4 LINE L1 5254 5698 -465 420 200 12 0 chr10 34921600 34921685 -110667603 - L1M4 LINE L1 -6419 1146 1061 4970 12 0 0 chr10 34921695 34922259 -110667029 - L1PA3 LINE L1 -1 6154 5591 4537 16 9 0 chr10 34922259 34922992 -110666296 + L1PA3 LINE L1 4856 5592 -563 * 5895 183 39 5 chr10 34922986 34924011 -110665277 - L1M4 LINE L1 -6487 1078 19 308 263 64 104 chr10 34924967 34925324 -110663964 - L1MC4a LINE L1 -1786 6022 5680 25 31 0 0 chr10 34925346 34925378 -110663910 + AT_rich Low_complexity Low_complexity 1 32 0 4534 221 68 77 chr10 34925772 34927946 -110661342 - L1MA8 LINE L1 -1 6290 4190 13747 40 5 5 chr10 34927946 34930402 -110658886 - L1PA5 LINE L1 0 6154 3699 4534 221 68 77 chr10 34930402 34931374 -110657914 - L1MA8 LINE L1 -2101 4190 3211 2985 9 0 0 chr10 34931964 34932299 -110656989 - L1PA3 LINE L1 -4 6151 5817 541 205 22 89 chr10 34932299 34932523 -110656765 - L1M4 LINE L1 -2935 4232 4024 2900 158 74 2 chr10 34932524 34933075 -110656213 + Tigger3(Golem) DNA MER2_type 2433 3023 -6 828 314 32 16 chr10 34933083 34933675 -110655613 - L1M4 LINE L1 -4945 2153 1534 2388 199 101 27 chr10 34934514 34935217 -110654071 - L1 LINE L1 -1140 5070 4309 345 47 0 0 chr10 34935217 34935260 -110654028 + (TG)n Simple_repeat Simple_repeat 2 44 0 2388 199 101 27 chr10 34935260 34935289 -110653999 - L1 LINE L1 -1901 4309 4284 2761 253 61 59 chr10 34935342 34936351 -110652937 - L1 LINE L1 -2657 3553 2548 248 32 0 0 chr10 34936351 34936382 -110652906 - Alu SINE Alu -15 285 255 2761 253 61 59 chr10 34936382 34937249 -110652039 - L1 LINE L1 -3662 2548 1685 7893 32 6 0 chr10 34937249 34938964 -110650324 + L1PA3 LINE L1 4434 6155 0 2761 253 61 59 chr10 34938964 34940007 -110649281 - L1 LINE L1 -4525 1685 727 787 318 61 26 chr10 34940027 34940568 -110648720 - L1 LINE L1 -5581 560 1 1251 71 82 11 chr10 34942013 34942197 -110647091 - L1PA6 LINE L1 0 6154 5958 239 311 38 9 chr10 34942838 34942944 -110646344 - MER76 LTR ERV -274 414 306 543 312 32 32 chr10 34943057 34943307 -110645981 - MER76 LTR ERV -438 250 1 441 0 0 0 chr10 34943323 34943372 -110645916 + (CA)n Simple_repeat Simple_repeat 2 50 0 201 271 0 0 chr10 34943376 34943424 -110645864 + (CATATA)n Simple_repeat Simple_repeat 1 48 0 244 301 41 16 chr10 34943465 34943588 -110645700 - L1MC4a LINE L1 -1233 6575 6450 5202 125 22 0 chr10 34943605 34945278 -110644010 - L1PA15 LINE L1 -7 6158 4438 278 274 26 103 chr10 34945288 34945522 -110643766 - L1PA12 LINE L1 -5831 1750 1535 1179 281 33 53 chr10 34945695 34946294 -110642994 - L1PA12 LINE L1 -6988 593 7 480 221 88 131 chr10 34946496 34946937 -110642351 - L1MC4a LINE L1 -1595 6213 5800 1587 55 0 15 chr10 34946937 34947136 -110642152 - MER107 DNA MER1_type 0 197 2 480 221 88 131 chr10 34947136 34947259 -110642029 - L1MC4a LINE L1 -2008 5800 5673 265 281 14 0 chr10 34947866 34947977 -110641311 - HERVL LTR ERVL -2374 3390 948 331 260 19 10 chr10 34948533 34948637 -110640651 - HERVL LTR ERVL -3035 2619 2515 516 200 78 106 chr10 34949984 34950344 -110638944 - L1MC4a LINE L1 -1786 6022 5673 2178 123 0 0 chr10 34951327 34951619 -110637669 - AluSx SINE Alu -20 292 1 508 242 20 90 chr10 34954259 34954503 -110634785 - MER76 LTR ERV -54 634 408 234 228 104 133 chr10 34954773 34955184 -110634104 - L1MC4a LINE L1 -1624 6184 5790 4803 149 22 38 chr10 34955184 34956063 -110633225 + MER6 DNA MER2_type 1 865 0 234 228 104 133 chr10 34956063 34956178 -110633110 - L1MC4a LINE L1 -2018 5790 5673 273 313 18 0 chr10 34957285 34957397 -110631891 - HERVL LTR ERVL -3019 2635 2522 1770 114 34 17 chr10 34958495 34958793 -110630495 - MER1A DNA MER1_type 0 529 227 11157 122 11 19 chr10 34958795 34960643 -110628645 + L1PA5 LINE L1 11 1842 -4304 * 39743 56 8 1 chr10 34960638 34966741 -110622547 - L1PA4 LINE L1 -1 6154 5 25929 64 1 0 chr10 34966739 34971064 -110618224 + L1PA5 LINE L1 1825 6152 -2 * 1448 171 4 0 chr10 34971092 34971326 -110617962 - MER1A DNA MER1_type -290 237 3 640 268 24 24 chr10 34972395 34972600 -110616688 - MER76 LTR ERV -33 655 451 306 244 103 0 chr10 34972706 34972784 -110616504 - L1MC4 LINE L1 -1340 6702 6617 368 254 17 8 chr10 34972792 34972910 -110616378 - L1MC4 LINE L1 -2017 5791 5673 12805 138 20 114 chr10 34975689 34978864 -110610424 + L1P LINE L1 9 2887 -3259 38214 68 8 2 chr10 34979298 34985408 -110603880 - L1PA4 LINE L1 -3 6152 1 379 265 161 60 chr10 34985423 34985759 -110603529 - L1MC4 LINE L1 -1388 4758 4389 334 287 127 53 chr10 34986477 34986627 -110602661 + MIR SINE MIR 26 186 -76 21 71 0 0 chr10 34987319 34987361 -110601927 + AT_rich Low_complexity Low_complexity 1 42 0 1829 355 72 27 chr10 34987500 34989038 -110600250 + ERVL LTR ERVL 3725 5379 -385 1155 308 65 22 chr10 34989291 34989784 -110599504 + LTR33 LTR ERVL 8 521 0 21 71 0 0 chr10 34989912 34989954 -110599334 + AT_rich Low_complexity Low_complexity 1 42 0 435 139 0 25 chr10 34989975 34990054 -110599234 - MER116 DNA Mariner 0 80 4 4339 202 48 9 chr10 34990748 34991634 -110597654 + L1MC1 LINE L1 5 925 -5501 232 184 0 0 chr10 34991637 34991675 -110597613 + L1MC1 LINE L1 4566 4603 -1823 5803 102 24 6 chr10 34991685 34992901 -110596387 - L1PA15 LINE L1 -4 6161 4926 549 220 98 71 chr10 34992907 34993162 -110596126 - L1PA13 LINE L1 -5334 1453 1192 * 2881 286 52 19 chr10 34993146 34993995 -110595293 - L1PA13 LINE L1 -5910 877 1 1166 261 37 0 chr10 34994006 34994358 -110594930 + L1MC1 LINE L1 4595 4959 -1467 2071 208 39 2 chr10 34994366 34994775 -110594513 + MSTB1 LTR MaLR 9 432 0 2547 202 22 9 chr10 34994820 34995666 -110593622 + L1MC1 LINE L1 5018 5872 -745 4963 35 2 3 chr10 34995900 34996493 -110592795 - L1PA5 LINE L1 0 6154 5563 2549 46 0 0 chr10 34996493 34996820 -110592468 + L1P LINE L1 4999 5325 -821 1527 168 16 19 chr10 34996817 34997127 -110592161 + L1MC1 LINE L1 5861 6169 -444 * 987 212 151 55 chr10 34997127 34997452 -110591836 + MLT1A1 LTR MaLR 9 364 -1 2292 146 28 21 chr10 34997453 34997885 -110591403 + L1MC1 LINE L1 6179 6613 0 772 270 103 20 chr10 34997891 34998362 -110590926 + L1MEc LINE L1 2200 2700 -3515 1299 178 12 45 chr10 34998400 34998647 -110590641 - MER8 DNA MER2_type 0 239 1 1294 182 12 45 chr10 34999434 34999681 -110589607 + MER8 DNA MER2_type 1 239 0 486 236 31 37 chr10 34999734 34999895 -110589393 + L1MCa LINE L1 455 614 -5812 3582 251 67 50 chr10 34999901 35001280 -110588008 + L1MC/D LINE L1 500 1855 -4709 1732 196 7 0 chr10 35001280 35001576 -110587712 + AluJb SINE Alu 3 300 -12 3582 251 67 50 chr10 35001576 35002864 -110586424 + L1MC/D LINE L1 1855 3232 -3332 * 4611 204 86 44 chr10 35002863 35003607 -110585681 + L1MC/D LINE L1 4065 4776 -1986 1847 31 0 9 chr10 35003607 35003833 -110585455 + L1PA3 LINE L1 5929 6152 -3 4611 204 86 44 chr10 35003833 35005042 -110584246 + L1MC/D LINE L1 4776 6100 -662 283 250 60 12 chr10 35005062 35005146 -110584142 + MER119 DNA MER1_type 455 542 -41 581 305 62 45 chr10 35005188 35005271 -110584017 + L1MCa LINE L1 2577 2657 -3769 2015 123 0 10 chr10 35005271 35005611 -110583677 - AluSx SINE Alu 0 337 1 5270 87 7 17 chr10 35005617 35006368 -110582920 - L1PA14 LINE L1 0 6161 5419 581 305 62 45 chr10 35006368 35006632 -110582656 + L1MCa LINE L1 2661 2939 -3487 248 279 79 38 chr10 35007143 35007408 -110581880 + L1MEc LINE L1 2183 2458 -3938 441 171 94 21 chr10 35007431 35007558 -110581730 + L1MC1 LINE L1 6209 6333 0 339 280 52 10 chr10 35007565 35007758 -110581530 + L1MEc LINE L1 2468 2668 -3547 827 120 16 0 chr10 35008155 35008280 -110581008 - AluSg/x SINE Alu -12 298 172 225 36 0 0 chr10 35008397 35008425 -110580863 + Alu SINE Alu 261 288 -12 2454 95 3 0 chr10 35008436 35008799 -110580489 + L1PA10 LINE L1 5812 6175 0 6955 222 34 31 chr10 35008838 35010479 -110578809 - L1MB4 LINE L1 -1 6677 5030 2182 123 10 0 chr10 35010479 35010788 -110578500 + AluSx SINE Alu 1 312 0 6955 222 34 31 chr10 35010788 35012110 -110577178 - L1MB4 LINE L1 -1648 5030 3713 2118 206 171 18 chr10 35012106 35012758 -110576530 - L1MB4 LINE L1 -3897 2749 1986 * 1919 120 14 3 chr10 35012758 35013049 -110576239 - AluSc SINE Alu -15 294 1 2118 206 171 18 chr10 35013049 35013081 -110576207 - L1MB4 LINE L1 -4660 1986 1960 252 367 0 7 chr10 35013183 35013330 -110575958 - L1MB4 LINE L1 -6383 159 14 4788 140 41 26 chr10 35014084 35015139 -110574149 + L1PA16 LINE L1 4408 5503 -663 2221 96 0 24 chr10 35015139 35015432 -110573856 - AluSx SINE Alu -26 286 1 4788 140 41 26 chr10 35015432 35016107 -110573181 + L1PA16 LINE L1 5503 6166 0 500 339 32 5 chr10 35016302 35016520 -110572768 - MIR SINE MIR -27 235 12 4277 16 0 0 chr10 35016715 35017204 -110572084 - L1PA2 LINE L1 -3 6152 5664 655 317 46 58 chr10 35018301 35018783 -110570505 + L1M3b LINE L1 1 476 -5805 21 36 0 0 chr10 35018951 35018979 -110570309 + AT_rich Low_complexity Low_complexity 1 28 0 1790 245 62 19 chr10 35019185 35020012 -110569276 + L1M3b LINE L1 1094 1943 -4408 3120 290 44 43 chr10 35020012 35021445 -110567843 + L1PBa LINE L1 67 1500 -5363 * 9466 213 43 18 chr10 35021443 35022918 -110566370 + L1PBa LINE L1 2427 3957 -2905 4908 51 2 0 chr10 35022918 35023525 -110565763 + L1PA7 LINE L1 5546 6153 -1 9466 213 43 18 chr10 35023525 35024808 -110564480 + L1PBa LINE L1 3957 5206 -1656 2239 172 59 13 chr10 35024904 35025381 -110563907 - L1M1 LINE L1 -5082 2483 1985 625 152 8 40 chr10 35025376 35025501 -110563787 - L1M1 LINE L1 -7429 136 16 * 916 207 10 35 chr10 35025773 35025976 -110563312 + MSTB LTR MaLR 1 198 -228 928 185 23 12 chr10 35025981 35026154 -110563134 + L1M4 LINE L1 22 196 -7369 13938 204 42 8 chr10 35026154 35028913 -110560375 - ERVL LTR ERVL -2150 3614 763 4551 198 45 25 chr10 35028928 35030615 -110558673 - L1MA7 LINE L1 -25 6852 5134 824 273 92 32 chr10 35030626 35030911 -110558377 - L1MA7 LINE L1 -5254 1399 583 337 304 70 23 chr10 35030958 35031129 -110558159 - L1M3d LINE L1 -5712 179 1 1877 258 20 30 chr10 35031142 35031639 -110557649 - ERVL LTR ERVL -5076 688 197 277 125 0 36 chr10 35032126 35032182 -110557106 + Alu SINE Alu 249 302 0 230 291 163 26 chr10 35032330 35032753 -110556535 + L1M4 LINE L1 2640 3120 -3026 895 160 75 0 chr10 35032930 35033118 -110556170 - L1PA13 LINE L1 -4608 2179 1978 2044 214 77 53 chr10 35033273 35033636 -110555652 + L1M4 LINE L1 1750 2103 -5368 2043 148 7 3 chr10 35033636 35033941 -110555347 + AluSx SINE Alu 1 306 -6 2044 214 77 53 chr10 35033941 35034451 -110554837 + L1M4 LINE L1 2103 2640 -4831 4275 250 47 91 chr10 35034463 35036958 -110552330 + L1M3e LINE L1 1 2377 -4660 959 206 48 31 chr10 35036958 35037186 -110552102 + MSTD LTR MaLR 1 232 -164 2350 265 34 17 chr10 35037186 35037834 -110551454 - MLT-int LTR MaLR -236 1499 841 3816 254 61 20 chr10 35037841 35039881 -110549407 + L1M2a LINE L1 1133 2975 -4192 2139 113 3 0 chr10 35039881 35040163 -110549125 + AluSx SINE Alu 1 283 -29 3816 254 61 20 chr10 35040163 35040432 -110548856 + L1M2a LINE L1 2975 3231 -3936 7012 110 5 7 chr10 35041002 35042042 -110547246 - HERVL-A2 LTR ERVL -4616 1038 1 2033 154 53 33 chr10 35042042 35042556 -110546732 - MLT2A2 LTR ERVL 0 554 17 1957 232 22 49 chr10 35042557 35043334 -110545954 - L1 LINE L1 -3334 2812 2054 262 116 0 0 chr10 35043433 35043476 -110545812 + L1MB8 LINE L1 6105 6147 -31 226 349 0 0 chr10 35044260 35044323 -110544965 + MIR SINE MIR 63 125 -83 198 0 0 0 chr10 35044440 35044462 -110544826 + (CA)n Simple_repeat Simple_repeat 2 23 0 2181 227 12 23 chr10 35045153 35045310 -110543978 + L1M4b LINE L1 1083 1240 -5615 1715 175 156 5 chr10 35045310 35045682 -110543606 - MSTA LTR MaLR 0 428 1 2181 227 12 23 chr10 35045682 35046181 -110543107 + L1M4b LINE L1 1240 1729 -5126 1155 269 74 28 chr10 35046184 35046683 -110542605 + L1M4b LINE L1 1838 2359 -4600 3647 191 132 173 chr10 35046918 35047321 -110541967 + L1M2 LINE L1 1 419 -6430 1000 132 0 0 chr10 35047321 35047457 -110541831 - AluSp SINE Alu -94 219 84 3647 191 132 173 chr10 35047457 35048408 -110540880 + L1M2 LINE L1 419 1514 -5335 549 213 8 25 chr10 35048408 35048530 -110540758 + FLAM_C SINE Alu 6 125 -18 3647 191 132 173 chr10 35048530 35048958 -110540330 + L1M2 LINE L1 1514 1958 -4891 4272 48 0 0 chr10 35048960 35049544 -110539744 + L1P2 LINE L1 5215 5798 -356 4264 198 48 9 chr10 35049549 35050859 -110538429 + L1M2 LINE L1 2680 4042 -2806 1233 247 28 8 chr10 35051125 35051514 -110537774 - L1 LINE L1 -3151 3177 2781 * 4141 143 82 20 chr10 35051510 35052397 -110536891 - L1PA16 LINE L1 0 6166 5234 370 296 0 10 chr10 35052486 35052584 -110536704 - L1PA13 LINE L1 -6564 223 127 3762 168 62 62 chr10 35052612 35053705 -110535583 - L1 LINE L1 -4065 1263 339 874 188 6 11 chr10 35053706 35053882 -110535406 - L1 LINE L1 -5149 179 5 260 340 90 19 chr10 35053962 35054118 -110535170 - MLT2E LTR ERVL -425 203 37 22 0 0 0 chr10 35054456 35054478 -110534810 + AT_rich Low_complexity Low_complexity 1 22 0 831 78 39 8 chr10 35054590 35054718 -110534570 + L1PB1 LINE L1 5659 5790 -361 274 103 0 35 chr10 35054738 35054796 -110534492 - L1MC4 LINE L1 -1339 6703 6648 189 147 0 0 chr10 35054828 35054862 -110534426 + (TA)n Simple_repeat Simple_repeat 1 34 0 2351 114 17 3 chr10 35054862 35055222 -110534066 + L1PB1 LINE L1 5785 6149 -2 23 0 0 0 chr10 35055227 35055250 -110534038 + AT_rich Low_complexity Low_complexity 1 23 0 27029 82 3 6 chr10 35055250 35058960 -110530328 - HERVL LTR ERVL -828 4826 1127 1022 104 0 0 chr10 35059061 35059196 -110530092 - AluY SINE Alu -176 135 1 382 291 22 66 chr10 35059459 35059686 -110529602 + L1MDa LINE L1 2430 2646 -3894 495 266 81 16 chr10 35059688 35059996 -110529292 + L1MDa LINE L1 2694 3021 -3519 36 40 0 0 chr10 35060059 35060109 -110529179 + AT_rich Low_complexity Low_complexity 1 50 0 30 103 0 0 chr10 35060383 35060490 -110528798 + AT_rich Low_complexity Low_complexity 1 107 0 496 290 44 61 chr10 35060590 35060713 -110528575 + L1MEc LINE L1 2192 2316 -4080 1649 138 15 0 chr10 35060713 35060974 -110528314 + L1PA11 LINE L1 5899 6163 -11 496 290 44 61 chr10 35060974 35061147 -110528141 + L1MEc LINE L1 2316 2483 -3913 391 273 77 7 chr10 35061242 35061385 -110527903 + L1MEc LINE L1 2517 2669 -3546 25 51 0 0 chr10 35061466 35061505 -110527783 + AT_rich Low_complexity Low_complexity 1 39 0 24196 61 11 1 chr10 35062528 35065780 -110523508 - L1P LINE L1 -2857 3289 4 631 258 45 42 chr10 35065782 35066115 -110523173 - L1M4c LINE L1 -4788 2171 1838 1709 213 32 74 chr10 35066120 35066794 -110522494 - L1M4c LINE L1 -5128 1727 1083 2362 100 0 6 chr10 35067386 35067697 -110521591 + AluSc SINE Alu 1 309 0 267 31 0 0 chr10 35068522 35068554 -110520734 + (TTG)n Simple_repeat Simple_repeat 2 33 0 21 36 0 0 chr10 35069247 35069275 -110520013 + AT_rich Low_complexity Low_complexity 1 28 0 588 160 28 35 chr10 35069402 35069546 -110519742 - L1MA4A LINE L1 0 6303 6161 2060 201 35 2 chr10 35069546 35070034 -110519254 - L1 LINE L1 -2122 4024 3521 694 170 7 20 chr10 35070031 35070184 -110519104 - L1MA4A LINE L1 -134 6169 6019 * 229 243 27 0 chr10 35070174 35070248 -110519040 - L1 LINE L1 -2690 3456 3381 * 22 0 0 0 chr10 35071110 35071132 -110518156 + AT_rich Low_complexity Low_complexity 1 22 0 306 295 38 9 chr10 35071574 35071679 -110517609 + L1MC4a LINE L1 5682 5789 -2019 453 290 54 49 chr10 35071739 35072073 -110517215 + L1MC4a LINE L1 5816 6154 -1654 2192 170 70 2 chr10 35072073 35072472 -110516816 + MSTB LTR MaLR 1 426 0 453 290 54 49 chr10 35072472 35072506 -110516782 + L1MC4a LINE L1 6154 6186 -1622 513 351 53 17 chr10 35072556 35072967 -110516321 + L1MC4 LINE L1 6276 6617 -1191 1528 283 62 28 chr10 35072977 35073620 -110515668 + MER76 LTR ERV 1 665 -23 2014 166 91 2 chr10 35075195 35075611 -110513677 + MLT1C LTR MaLR 2 454 -13 201 155 28 84 chr10 35125789 35125860 -110463428 - L2 LINE L2 -759 2555 2489 649 207 69 57 chr10 35126044 35126290 -110462998 + MER112 DNA MER1_type 6 254 -6 6022 226 94 16 chr10 35126582 35128732 -110460556 - L1M4c LINE L1 -4377 2448 2 3243 159 43 19 chr10 35129761 35130446 -110458842 - Tigger7 DNA MER2_type 0 2487 1 333 150 14 186 chr10 35130935 35131075 -110458213 + MIR SINE MIR 123 238 -24 332 103 0 29 chr10 35131260 35131328 -110457960 + (TCTCTG)n Simple_repeat Simple_repeat 2 67 0 339 85 0 0 chr10 35133778 35133825 -110455463 + (TG)n Simple_repeat Simple_repeat 2 48 0 262 340 64 0 chr10 35134214 35134308 -110454980 - L2 LINE L2 -9 3263 3164 224 361 76 8 chr10 35134368 35134487 -110454801 - L2 LINE L2 0 3272 3146 1275 257 29 11 chr10 35134646 35135074 -110454214 + MLT1H1 LTR MaLR 1 481 -61 295 214 69 92 chr10 35135387 35135518 -110453770 - MIR SINE MIR -9 253 126 1576 171 68 54 chr10 35135924 35136293 -110452995 + MLT1A2 LTR MaLR 1 374 0 204 238 0 0 chr10 35136416 35136458 -110452830 - MIR SINE MIR -113 149 108 464 281 87 46 chr10 35138096 35138662 -110450626 - L1ME LINE L1 -4914 1156 560 1848 169 3 10 chr10 35138829 35139130 -110450158 - AluJb SINE Alu -13 299 1 2277 180 35 64 chr10 35139218 35139719 -110449569 + MLT2B1 LTR ERVL 1 389 -25 2940 96 73 0 chr10 35139938 35140335 -110448953 - MSTA LTR MaLR -2 426 1 306 0 0 0 chr10 35140380 35140414 -110448874 + (TG)n Simple_repeat Simple_repeat 2 35 0 1200 186 5 0 chr10 35140449 35140642 -110448646 + MSTA LTR MaLR 1 194 -234 222 214 11 34 chr10 35140684 35140773 -110448515 + (TA)n Simple_repeat Simple_repeat 2 88 0 817 265 119 107 chr10 35140846 35141258 -110448030 + LTR16A LTR ERVL 1 417 -33 420 282 24 0 chr10 35141398 35141522 -110447766 - L1ME LINE L1 -5937 133 7 431 292 100 89 chr10 35141948 35142308 -110446980 + L3 LINE CR1 700 1063 -514 1083 199 41 8 chr10 35142320 35142628 -110446660 + MLT1A1 LTR MaLR 8 365 0 482 304 158 21 chr10 35142638 35142973 -110446315 + L3 LINE CR1 1091 1471 -106 500 249 59 102 chr10 35143018 35143052 -110446236 + MER102a DNA MER1_type 37 71 -1346 2186 141 0 0 chr10 35143052 35143364 -110445924 + AluSx SINE Alu 1 312 0 500 249 59 102 chr10 35143364 35143500 -110445788 + MER102a DNA MER1_type 71 191 -1226 2432 161 41 5 chr10 35143500 35143917 -110445371 - MSTB1 LTR MaLR 0 432 1 500 249 59 102 chr10 35143917 35144050 -110445238 + MER102a DNA MER1_type 191 328 -2 206 179 26 0 chr10 35144668 35144707 -110444581 + L3 LINE CR1 1536 1575 -2 644 103 21 10 chr10 35144745 35144842 -110444446 + MER4A LTR ERV1 1 98 -566 1994 128 3 19 chr10 35144842 35145193 -110444095 + MER4A LTR ERV1 261 664 0 676 231 68 68 chr10 35146344 35146396 -110442892 - L1ME1 LINE L1 -25 6141 6090 2103 107 48 0 chr10 35146396 35146685 -110442603 - AluSx SINE Alu -7 305 3 676 231 68 68 chr10 35146685 35146883 -110442405 - L1ME1 LINE L1 -75 6091 5891 270 0 0 0 chr10 35148151 35148181 -110441107 + (TG)n Simple_repeat Simple_repeat 2 31 0 502 243 88 33 chr10 35148377 35148558 -110440730 + MIR SINE MIR 18 208 -54 1724 134 0 4 chr10 35148671 35148925 -110440363 + AluSg SINE Alu 51 303 -7 2204 97 20 10 chr10 35149469 35149792 -110439496 + AluSx SINE Alu 1 312 0 362 200 14 136 chr10 35149802 35149942 -110439346 - L1ME4a LINE L1 -64 6057 5935 1241 311 171 26 chr10 35151604 35152895 -110436393 + L2 LINE L2 1836 3313 0 1628 277 114 59 chr10 35153361 35154713 -110434575 + L1ME2 LINE L1 88 1401 -4816 1588 245 147 11 chr10 35154895 35155459 -110433829 - L1MEc LINE L1 -1524 4691 4051 * 3918 249 61 30 chr10 35155455 35155851 -110433437 - L1MEc LINE L1 -2553 3662 3280 2461 83 0 0 chr10 35155851 35156152 -110433136 - AluSg SINE Alu -9 301 1 3918 249 61 30 chr10 35156152 35157724 -110431564 - L1MEc LINE L1 -2935 3280 1658 301 294 46 61 chr10 35157726 35157923 -110431365 + L1ME2 LINE L1 2197 2390 -4006 265 300 33 7 chr10 35157946 35158096 -110431192 + L1ME2 LINE L1 2401 2554 -3661 1085 306 100 27 chr10 35158114 35159498 -110429790 + L1ME2 LINE L1 4212 5702 -537 594 67 0 0 chr10 35159528 35159603 -110429685 - MADE1 DNA Mariner -5 75 1 241 212 113 13 chr10 35159962 35160055 -110429233 + L1ME2 LINE L1 5910 6009 -222 2181 118 0 3 chr10 35161078 35161383 -110427905 - AluSx SINE Alu -8 304 1 2227 109 3 0 chr10 35163455 35163749 -110425539 - AluSp SINE Alu -18 295 1 371 277 43 21 chr10 35163791 35163932 -110425356 - MARNA DNA Mariner -16 570 427 202 50 50 50 chr10 35164054 35164094 -110425194 + (TAAAAA)n Simple_repeat Simple_repeat 2 41 0 2038 172 20 20 chr10 35164108 35164498 -110424790 + MLT1B LTR MaLR 1 390 0 422 250 10 0 chr10 35166001 35166097 -110423191 - MIR SINE MIR -111 151 55 407 214 42 10 chr10 35166766 35166871 -110422417 - L1MC/D LINE L1 -430 5736 5641 2688 173 20 9 chr10 35166873 35167331 -110421957 + Tigger1 DNA MER2_type 2 464 -1954 2130 166 119 8 chr10 35167331 35167716 -110421572 - MSTA LTR MaLR 0 428 1 2615 100 23 18 chr10 35167716 35168107 -110421181 - MSTA-int LTR MaLR 0 1580 1188 11227 116 19 15 chr10 35168107 35168618 -110420670 + Tigger1 DNA MER2_type 456 964 -1454 2365 92 0 0 chr10 35168618 35168913 -110420375 - AluY SINE Alu -16 295 1 1772 192 7 0 chr10 35168916 35169218 -110420070 - AluSx SINE Alu -8 304 1 11227 116 19 15 chr10 35169218 35170412 -110418876 + Tigger1 DNA MER2_type 965 2171 -247 1868 192 35 15 chr10 35170415 35170811 -110418477 - L1MDa LINE L1 -4658 1882 1479 667 223 144 54 chr10 35170934 35171288 -110418000 + L1MC5 LINE L1 7121 7506 -455 2740 183 90 16 chr10 35171326 35171950 -110417338 - MER63C DNA MER1_type -136 794 125 250 61 0 0 chr10 35171992 35172025 -110417263 - MER63C DNA MER1_type -897 33 1 233 233 100 0 chr10 35172994 35173054 -110416234 - MER2 DNA MER2_type 0 345 280 534 117 45 63 chr10 35173100 35173211 -110416077 - MER2 DNA MER2_type -136 209 101 22 35 0 0 chr10 35174402 35174431 -110414857 + AT_rich Low_complexity Low_complexity 1 29 0 260 317 0 12 chr10 35174540 35174622 -110414666 + MER3 DNA MER1_type 49 129 -80 2028 61 0 27 chr10 35174622 35174883 -110414405 - AluY SINE Alu -21 290 37 2261 155 77 34 chr10 35174922 35175523 -110413765 - L1MB3 LINE L1 -519 5664 5057 * 2410 141 107 19 chr10 35175480 35175964 -110413324 + L1MB3 LINE L1 5646 6172 -11 264 137 59 20 chr10 35175964 35176015 -110413273 + MER3 DNA MER1_type 155 207 -2 * 271 176 0 20 chr10 35175977 35176028 -110413260 - MER3 DNA MER1_type -123 86 37 364 229 110 28 chr10 35176429 35176538 -110412750 + MIR3 SINE MIR 68 185 -23 1838 164 67 12 chr10 35176596 35176926 -110412362 + MER7A DNA MER2_type 1 346 0 23 0 0 0 chr10 35177394 35177417 -110411871 + GC_rich Low_complexity Low_complexity 1 23 0 2246 88 14 7 chr10 35178277 35178574 -110410714 - AluSq SINE Alu -14 299 1 217 310 34 96 chr10 35179289 35179355 -110409933 - L3 LINE CR1 -418 1159 1090 2238 89 38 0 chr10 35179355 35179647 -110409641 + AluSp SINE Alu 1 303 -10 217 310 34 96 chr10 35179647 35179903 -110409385 - L3 LINE CR1 -487 1090 857 896 265 17 21 chr10 35179936 35180227 -110409061 - L1ME3A LINE L1 -5 6165 5876 342 0 0 0 chr10 35180498 35180536 -110408752 + (TG)n Simple_repeat Simple_repeat 2 39 0 226 161 71 0 chr10 35180872 35180984 -110408304 + (TA)n Simple_repeat Simple_repeat 1 120 0 1933 148 0 7 chr10 35182061 35182352 -110406936 - AluJo SINE Alu -23 289 1 635 275 137 28 chr10 35182353 35182637 -110406651 - LTR33 LTR ERVL -55 466 152 24 0 0 0 chr10 35183398 35183422 -110405866 + AT_rich Low_complexity Low_complexity 1 24 0 821 165 8 0 chr10 35183422 35183549 -110405739 - FLAM_A SINE Alu -4 129 2 1112 65 7 0 chr10 35183846 35183984 -110405304 - L1MA3 LINE L1 -3 6302 6164 526 250 79 18 chr10 35185344 35185547 -110403741 - MIR SINE MIR -48 214 1 660 310 112 39 chr10 35186030 35186197 -110403091 + L2 LINE L2 2815 2968 -345 578 141 11 0 chr10 35186197 35186289 -110402999 + HY4 scRNA scRNA 1 93 0 660 310 112 39 chr10 35186289 35186586 -110402702 + L2 LINE L2 2968 3313 0 231 268 209 26 chr10 35187257 35187410 -110401878 + MIR SINE MIR 28 208 -54 393 301 65 48 chr10 35187506 35187692 -110401596 + MIR3 SINE MIR 20 208 0 1795 97 0 0 chr10 35187763 35187989 -110401299 + AluSg/x SINE Alu 80 305 -5 250 253 50 86 chr10 35188112 35188227 -110401061 + MER5A DNA MER1_type 1 124 -65 1620 179 17 10 chr10 35188227 35188524 -110400764 - AluJo SINE Alu -13 299 1 250 253 50 86 chr10 35188524 35188558 -110400730 + MER5A DNA MER1_type 124 158 -31 1881 168 18 0 chr10 35188868 35189195 -110400093 - MLT1B LTR MaLR -57 333 1 303 28 0 0 chr10 35190258 35190294 -110398994 + (TG)n Simple_repeat Simple_repeat 1 36 0 1577 157 9 63 chr10 35191126 35191445 -110397843 - AluJo SINE Alu -7 305 4 1423 224 69 58 chr10 35193370 35193392 -110395896 - L1MC5 LINE L1 -815 7146 7126 2279 89 0 3 chr10 35193392 35193694 -110395594 - AluSq SINE Alu -12 301 1 1423 224 69 58 chr10 35193694 35194297 -110394991 - L1MC5 LINE L1 -835 7126 6518 465 268 38 65 chr10 35194956 35195217 -110394071 + L1ME4a LINE L1 5509 5762 -359 816 243 201 25 chr10 35195248 35195815 -110393473 - Charlie7 DNA MER1_type -23 2589 1923 2550 88 0 0 chr10 35195840 35196171 -110393117 - L1PA13 LINE L1 -8 6155 5825 283 0 23 45 chr10 35196173 35196217 -110393071 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 1927 117 7 3 chr10 35196217 35196499 -110392789 - AluSx SINE Alu -29 283 1 403 263 59 7 chr10 35196502 35196654 -110392634 + Charlie7 DNA MER1_type 1396 1555 -1057 1321 122 0 0 chr10 35196675 35196883 -110392405 + AluSq SINE Alu 95 302 0 1157 254 16 0 chr10 35196931 35197187 -110392101 - MIR SINE MIR -2 260 1 2409 226 187 51 chr10 35197213 35197528 -110391760 - Charlie7 DNA MER1_type -1296 1316 1045 2136 100 0 16 chr10 35197528 35197837 -110391451 - AluSq SINE Alu -7 306 3 1813 154 3 0 chr10 35197847 35198133 -110391155 - AluJb SINE Alu -25 287 1 2409 226 187 51 chr10 35198133 35198617 -110390671 - Charlie7 DNA MER1_type -1574 1038 621 1036 127 0 58 chr10 35198617 35198655 -110390633 - L1PB4 LINE L1 -1 6155 6116 1774 136 4 0 chr10 35198655 35198920 -110390368 - AluSx SINE Alu -12 300 35 1036 127 0 58 chr10 35198920 35199070 -110390218 - L1PB4 LINE L1 -40 6116 5978 2409 226 187 51 chr10 35199070 35199382 -110389906 - Charlie7 DNA MER1_type -1991 621 40 274 278 43 9 chr10 35199401 35199516 -110389772 + L1ME4a LINE L1 5791 5909 -212 1683 172 111 18 chr10 35199684 35200079 -110389209 + MSTB1 LTR MaLR 1 432 0 1046 97 0 7 chr10 35200512 35200657 -110388631 + FRAM SINE Alu 1 140 -36 2032 135 0 0 chr10 35201105 35201409 -110387879 - AluSx SINE Alu 0 312 9 979 115 0 0 chr10 35201411 35201550 -110387738 - AluSq/x SINE Alu -174 139 1 1419 180 20 39 chr10 35201615 35201920 -110387368 + AluJo SINE Alu 1 299 -13 625 252 19 48 chr10 35201995 35202205 -110387083 - MIR SINE MIR -57 205 2 228 296 0 0 chr10 35202649 35202774 -110386514 + (TG)n Simple_repeat Simple_repeat 2 126 0 188 333 146 10 chr10 35203826 35203922 -110385366 - MIR SINE MIR -76 132 24 449 125 102 0 chr10 35204495 35204583 -110384705 + L1MB3 LINE L1 6080 6176 -7 1586 197 0 16 chr10 35204586 35204901 -110384387 - AluJo SINE Alu 0 312 3 2101 105 87 19 chr10 35204901 35205224 -110384064 + THE1B LTR MaLR 1 345 -19 1578 83 5 14 chr10 35205626 35205842 -110383446 + AluSq SINE Alu 1 214 -99 1383 163 4 0 chr10 35205849 35206076 -110383212 - AluJb SINE Alu -82 230 3 721 138 50 50 chr10 35206078 35206237 -110383051 + L1MB4 LINE L1 6020 6178 -2 207 88 0 0 chr10 35206366 35206400 -110382888 + (TTTA)n Simple_repeat Simple_repeat 4 37 0 207 0 0 0 chr10 35206399 35206422 -110382866 + (TC)n Simple_repeat Simple_repeat 2 24 0 741 130 16 32 chr10 35206422 35206545 -110382743 - AluSx SINE Alu -10 299 179 291 44 267 0 chr10 35206546 35206591 -110382697 + AluSg/x SINE Alu 138 194 -106 1264 106 0 32 chr10 35206592 35206780 -110382508 - AluSx SINE Alu -130 182 1 302 300 107 104 chr10 35207382 35207832 -110381456 + L2 LINE L2 2822 3272 0 279 280 121 51 chr10 35207833 35207990 -110381298 + MIR SINE MIR 24 191 -71 1901 139 7 10 chr10 35207995 35208290 -110380998 + AluSx SINE Alu 1 294 -18 544 278 31 19 chr10 35208365 35208527 -110380761 - MIR SINE MIR -4 258 95 1827 162 0 7 chr10 35208551 35208859 -110380429 + AluJo SINE Alu 1 306 -6 797 157 0 0 chr10 35208880 35208995 -110380293 + FLAM_C SINE Alu 4 118 -15 1404 174 89 0 chr10 35210497 35210779 -110378509 - AluJo SINE Alu -3 309 3 1022 135 22 17 chr10 35211267 35211445 -110377843 + L1PA16 LINE L1 5979 6157 -9 349 322 114 42 chr10 35211766 35212055 -110377233 + L1M4 LINE L1 4623 4932 -1214 21 82 0 0 chr10 35212179 35212228 -110377060 + AT_rich Low_complexity Low_complexity 1 49 0 4127 193 120 35 chr10 35212303 35213262 -110376026 - Charlie1 DNA MER1_type 0 2761 1885 1901 144 0 0 chr10 35213262 35213553 -110375735 + AluJb SINE Alu 1 291 -21 4127 193 120 35 chr10 35213553 35213601 -110375687 - Charlie1 DNA MER1_type -876 1885 1842 2232 108 0 13 chr10 35213601 35213915 -110375373 + AluSg SINE Alu 1 310 0 4127 193 120 35 chr10 35213915 35214083 -110375205 - Charlie1 DNA MER1_type -919 1842 1485 1137 200 225 48 chr10 35214083 35214662 -110374626 + L1MC4 LINE L1 7373 7785 0 238 182 68 68 chr10 35214738 35214826 -110374462 + L1MC4a LINE L1 6052 6139 -1669 1224 187 128 22 chr10 35214841 35215114 -110374174 - AluJo SINE Alu 0 302 1 1783 139 0 4 chr10 35215145 35215425 -110373863 - AluJo SINE Alu -23 289 11 710 290 119 43 chr10 35215711 35216007 -110373281 - L1M4 LINE L1 -2916 3230 2958 1801 163 3 6 chr10 35216007 35216320 -110372968 - AluJo SINE Alu 0 312 1 710 290 119 43 chr10 35216320 35216534 -110372754 - L1M4 LINE L1 -3188 2958 2681 802 107 0 8 chr10 35216753 35216874 -110372414 - AluSg/x SINE Alu -17 293 174 272 244 65 24 chr10 35216884 35217007 -110372281 - HAL1b LINE L1 -539 809 682 321 244 156 19 chr10 35217059 35217219 -110372069 - L1ME3A LINE L1 -182 6268 6087 4941 259 115 28 chr10 35217249 35217339 -110371949 - L1MEc LINE L1 -1303 5123 5042 1471 110 13 31 chr10 35217339 35217567 -110371721 + MER30 DNA MER1_type 4 227 -3 4941 259 115 28 chr10 35217567 35217724 -110371564 - L1MEc LINE L1 -1384 5042 4900 2336 66 10 0 chr10 35217724 35218029 -110371259 - AluY SINE Alu -3 308 1 4941 259 115 28 chr10 35218029 35220109 -110369179 - L1MEc LINE L1 -1526 4900 2588 1948 125 4 0 chr10 35220109 35220421 -110368867 + AluSx SINE Alu 1 313 0 4941 259 115 28 chr10 35220421 35220628 -110368660 - L1MEc LINE L1 -3838 2588 2400 2850 87 24 7 chr10 35220792 35221206 -110368082 - L1PA13 LINE L1 -1 6162 5742 225 0 0 0 chr10 35221319 35221344 -110367944 + (CA)n Simple_repeat Simple_repeat 2 26 0 464 281 127 26 chr10 35221500 35221904 -110367384 - L1MEc LINE L1 -4700 1733 1371 180 0 0 0 chr10 35221904 35221924 -110367364 + (TTA)n Simple_repeat Simple_repeat 2 21 0 464 281 127 26 chr10 35221924 35222332 -110366956 - L1MEc LINE L1 -5062 1371 996 439 197 103 17 chr10 35222403 35222520 -110366768 - L1ME2 LINE L1 -2 6162 6036 477 237 53 0 chr10 35222555 35222707 -110366581 + L1ME1 LINE L1 5733 5892 -274 1866 108 22 4 chr10 35222719 35223035 -110366253 + AluSx SINE Alu 1 321 0 474 324 149 18 chr10 35223108 35223444 -110365844 - L3 LINE CR1 -805 772 393 1896 130 0 0 chr10 35223698 35224024 -110365264 + AluSx SINE Alu 1 326 0 660 185 116 41 chr10 35224300 35224446 -110364842 + MER2 DNA MER2_type 1 157 -188 218 339 189 0 chr10 35225143 35225270 -110364018 + MIR3 SINE MIR 47 197 -11 394 262 99 0 chr10 35225514 35225655 -110363633 - MIR3 SINE MIR -5 203 49 1600 177 0 3 chr10 35226088 35226370 -110362918 + AluJo SINE Alu 1 281 -31 566 82 12 0 chr10 35226373 35226458 -110362830 + (GGAA)n Simple_repeat Simple_repeat 4 89 0 271 70 0 70 chr10 35226921 35226964 -110362324 + AluJ/FLAM SINE Alu 21 60 -242 427 215 11 11 chr10 35226964 35227057 -110362231 - AluJo SINE Alu -133 179 87 2577 80 0 43 chr10 35227245 35227618 -110361670 - MER4A LTR ERV1 -307 357 1 1976 149 0 7 chr10 35227800 35228101 -110361187 + AluSx SINE Alu 1 299 -13 183 42 0 0 chr10 35228105 35228129 -110361159 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 245 341 0 0 chr10 35228313 35228401 -110360887 + (TGAA)n Simple_repeat Simple_repeat 1 88 0 2347 181 12 5 chr10 35228418 35228605 -110360683 + MSTB LTR MaLR 14 198 -228 5224 46 16 0 chr10 35228605 35229232 -110360056 + L1PA8 LINE L1 5532 6168 -4 2347 181 12 5 chr10 35229232 35229454 -110359834 + MSTB LTR MaLR 198 426 0 2099 116 7 3 chr10 35230705 35231015 -110358273 - AluSq SINE Alu -2 311 1 427 305 118 35 chr10 35231052 35231255 -110358033 - MIR SINE MIR -42 220 1 2119 109 6 3 chr10 35231484 35231795 -110357493 + AluSx SINE Alu 1 312 0 243 319 26 9 chr10 35231798 35231905 -110357383 + L1ME4a LINE L1 5815 5924 -192 216 0 0 0 chr10 35231905 35231929 -110357359 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 321 219 0 117 chr10 35231952 35232080 -110357208 + L1ME4a LINE L1 6009 6121 0 201 245 20 0 chr10 35232909 35232958 -110356330 - MIR3 SINE MIR -8 200 151 248 292 97 18 chr10 35233137 35233250 -110356038 - MIR SINE MIR -67 141 20 247 257 138 18 chr10 35234077 35234186 -110355102 - L2 LINE L2 -227 3045 2924 880 200 43 0 chr10 35236788 35236978 -110352310 + MSTB-int LTR MaLR 32 229 -1477 1721 152 156 9 chr10 35236978 35237293 -110351995 + MSTA LTR MaLR 68 428 0 9816 129 7 54 chr10 35237295 35238950 -110350338 + MSTA-int LTR MaLR 3 1579 -1 743 158 211 7 chr10 35238951 35239103 -110350185 + MSTA LTR MaLR 1 183 -245 1538 109 101 16 chr10 35239337 35239584 -110349704 + MSTA LTR MaLR 161 428 0 1084 233 24 12 chr10 35239584 35239837 -110349451 + MLT-int LTR MaLR 387 642 -1093 368 270 36 36 chr10 35240094 35240205 -110349083 - L2 LINE L2 0 3313 3203 282 160 0 0 chr10 35241460 35241510 -110347778 + (CA)n Simple_repeat Simple_repeat 2 51 0 269 277 31 39 chr10 35241632 35241762 -110347526 + L2 LINE L2 2925 3053 -219 770 187 0 0 chr10 35244060 35244194 -110345094 + MER94 DNA DNA 1 134 0 2009 130 7 21 chr10 35245535 35245820 -110343468 + AluSx SINE Alu 1 281 -31 207 69 0 0 chr10 35245823 35245852 -110343436 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 541 297 54 58 chr10 35246336 35246763 -110342525 + L1MCc LINE L1 14 438 -5985 963 263 103 41 chr10 35247269 35247961 -110341327 + L1MCc LINE L1 1262 2003 -4893 1838 168 0 0 chr10 35247961 35248247 -110341041 + AluJb SINE Alu 20 305 -7 1696 82 24 4 chr10 35248324 35248579 -110340709 - L1MA2 LINE L1 0 6304 6045 43112 56 5 1 chr10 35248579 35254689 -110334599 - L1PA5 LINE L1 -9 6145 11 542 213 49 129 chr10 35254688 35255007 -110334281 + L1M2 LINE L1 1564 1924 -4292 * 240 111 0 0 chr10 35255007 35255052 -110334236 + (TG)n Simple_repeat Simple_repeat 2 46 0 542 213 49 129 chr10 35255052 35255096 -110334192 + L1M2 LINE L1 1924 1970 -4246 2086 135 3 0 chr10 35255111 35255400 -110333888 + AluSx SINE Alu 9 298 -14 253 271 140 0 chr10 35255418 35255525 -110333763 + L1MCc LINE L1 2570 2691 -4431 552 279 35 35 chr10 35255535 35255707 -110333581 + MLT1J LTR MaLR 184 355 -156 1984 151 6 22 chr10 35256919 35257266 -110332022 + AluSx SINE Alu 1 342 0 434 282 151 62 chr10 35257559 35257871 -110331417 + MLT1L LTR MaLR 3 286 -329 1661 160 43 43 chr10 35257871 35258171 -110331117 + AluJo SINE Alu 1 300 -12 434 282 151 62 chr10 35258171 35258421 -110330867 + MLT1L LTR MaLR 286 615 0 399 287 44 7 chr10 35259426 35259562 -110329726 + MIR SINE MIR 47 187 -75 2396 82 7 0 chr10 35259790 35260093 -110329195 + AluSp SINE Alu 1 305 -8 216 274 0 16 chr10 35260739 35260801 -110328487 + GA-rich Low_complexity Low_complexity 5 65 0 21 36 0 0 chr10 35260968 35260996 -110328292 + AT_rich Low_complexity Low_complexity 1 28 0 1502 191 70 0 chr10 35260996 35261269 -110328019 + AluJo SINE Alu 1 292 -20 658 205 38 102 chr10 35261344 35261637 -110327651 + L1ME4a LINE L1 5672 5945 -176 1819 155 50 83 chr10 35262290 35262454 -110326834 + MLT1D LTR MaLR 1 169 -336 2132 142 0 0 chr10 35262454 35262749 -110326539 - AluSx SINE Alu -17 295 1 1819 155 50 83 chr10 35262749 35262784 -110326504 + MLT1D LTR MaLR 169 204 -301 2109 187 72 119 chr10 35262784 35263547 -110325741 + LTR8A LTR ERV1 1 727 0 1819 155 50 83 chr10 35263547 35263745 -110325543 + MLT1D LTR MaLR 204 386 -119 * 3738 125 36 0 chr10 35263727 35264312 -110324976 + LTR24C LTR ERV1 30 635 0 255 132 0 0 chr10 35264312 35264350 -110324938 + MLT1D LTR MaLR 468 505 0 181 274 48 0 chr10 35264369 35264431 -110324857 + MIR SINE MIR 124 188 -74 1134 150 0 99 chr10 35264612 35264845 -110324443 + AluJo SINE Alu 90 299 -13 283 211 0 0 chr10 35264904 35264982 -110324306 - MIR SINE MIR -64 144 66 295 346 13 26 chr10 35265045 35265198 -110324090 - MER5A DNA MER1_type -32 157 7 331 246 132 54 chr10 35265299 35265632 -110323656 - L1MC4 LINE L1 -2 8040 7682 196 254 0 60 chr10 35265997 35266064 -110323224 + L2 LINE L2 2427 2489 -825 206 287 30 20 chr10 35266255 35266356 -110322932 + L2 LINE L2 2719 2820 -494 757 333 47 43 chr10 35266865 35267062 -110322226 + L2 LINE L2 2188 2383 -931 2608 139 25 28 chr10 35267062 35267307 -110321981 - MSTB1 LTR MaLR 0 432 187 225 0 0 0 chr10 35267307 35267332 -110321956 + (TG)n Simple_repeat Simple_repeat 2 26 0 2608 139 25 28 chr10 35267332 35267518 -110321770 - MSTB1 LTR MaLR -245 187 2 757 333 47 43 chr10 35267518 35267854 -110321434 + L2 LINE L2 2383 2723 -591 4226 89 11 101 chr10 35268511 35269241 -110320047 + MER4A LTR ERV1 1 664 0 2304 116 73 14 chr10 35270309 35270653 -110318635 - THE1B LTR MaLR 0 364 1 11784 84 5 0 chr10 35270653 35272143 -110317145 - THE1B-int LTR MaLR 0 1580 84 2081 147 75 15 chr10 35272147 35272480 -110316808 - THE1B LTR MaLR -11 353 1 1108 284 108 33 chr10 35272732 35273215 -110316073 + LTR33 LTR ERVL 1 519 -2 1994 122 3 52 chr10 35273694 35274023 -110315265 - MER4E LTR ERV1 -1 778 466 1298 131 10 10 chr10 35274070 35274269 -110315019 - MER4B LTR ERV1 -411 199 1 1050 344 99 29 chr10 35274330 35275340 -110313948 + ERVL LTR ERVL 861 1941 -3823 * 1795 296 57 37 chr10 35275338 35276279 -110313009 + ERVL LTR ERVL 1906 2935 -2111 419 322 64 40 chr10 35276401 35276525 -110312763 + ERVL LTR ERVL 3049 3169 -2532 2022 150 127 18 chr10 35276525 35276911 -110312377 + MSTA LTR MaLR 1 428 0 419 322 64 40 chr10 35276911 35277137 -110312151 + ERVL LTR ERVL 3169 3457 -2244 1721 204 48 25 chr10 35277161 35277554 -110311734 + MLT2D LTR ERVL 1 402 -12 941 269 18 4 chr10 35277751 35278026 -110311262 + ERVL LTR ERVL 3767 4045 -1719 597 284 77 42 chr10 35278118 35278160 -110311128 + ERVL LTR ERVL 4264 4303 -1461 2442 169 20 2 chr10 35278160 35278568 -110310720 - MER47B DNA MER2_type -3 415 1 597 284 77 42 chr10 35278568 35278810 -110310478 + ERVL LTR ERVL 4303 4558 -1206 1882 151 0 35 chr10 35278815 35279126 -110310162 - AluJb SINE Alu -7 305 6 507 276 26 13 chr10 35279792 35279944 -110309344 + LTR33 LTR ERVL 44 197 -324 1270 174 5 5 chr10 35379994 35380213 -110209075 + AluJb SINE Alu 93 311 -1 304 344 16 60 chr10 35381420 35381670 -110207618 - L1ME LINE L1 -529 5637 5399 2504 68 0 0 chr10 35381892 35382201 -110207087 + AluSc SINE Alu 1 309 0 934 254 150 48 chr10 35382227 35382800 -110206488 - LTR50 LTR ERVL -91 704 1 276 291 0 0 chr10 35383058 35383144 -110206144 - MLT-int LTR MaLR -21 1714 1629 405 0 0 0 chr10 35383244 35383289 -110205999 + (CA)n Simple_repeat Simple_repeat 2 46 0 1798 238 92 21 chr10 35383547 35384207 -110205081 - L1 LINE L1 -2994 3152 2446 757 110 76 0 chr10 35384953 35385071 -110204217 - AluSg/x SINE Alu -13 299 173 21 0 0 0 chr10 35385824 35385845 -110203443 + AT_rich Low_complexity Low_complexity 1 21 0 1560 165 29 0 chr10 35386353 35386632 -110202656 - L1PA16 LINE L1 -6 6160 5874 517 292 39 35 chr10 35387203 35387463 -110201825 - L1MC4a LINE L1 -1972 5836 5576 456 167 0 108 chr10 35387546 35387666 -110201622 + L1M4 LINE L1 4521 4627 -1519 3757 103 2 0 chr10 35387709 35388203 -110201085 - MER1A DNA MER1_type 0 529 35 2513 225 42 3 chr10 35388225 35388870 -110200418 + L1M4 LINE L1 4663 5332 -814 2339 269 59 8 chr10 35388870 35389611 -110199677 + L1M3 LINE L1 934 1712 -5456 299 275 28 18 chr10 35389614 35389723 -110199565 + L1M3 LINE L1 1823 1932 -5236 4897 215 16 48 chr10 35389763 35391186 -110198102 + L1M3 LINE L1 3673 5049 -2118 * 20405 74 9 5 chr10 35391184 35395040 -110194248 + L1PA7 LINE L1 2282 6154 0 3038 182 78 18 chr10 35395037 35395806 -110193482 + L1M3 LINE L1 5036 5850 -1317 * 1232 221 0 0 chr10 35395827 35396049 -110193239 - AluJo SINE Alu -17 295 74 2165 181 58 66 chr10 35396068 35396356 -110192932 + L1M3 LINE L1 5868 6157 -1047 234 0 0 0 chr10 35396356 35396382 -110192906 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 2165 181 58 66 chr10 35396382 35396781 -110192507 + L1M3 LINE L1 6157 6550 -654 180 152 0 0 chr10 35396952 35396985 -110192303 + (TA)n Simple_repeat Simple_repeat 1 33 0 22 0 0 0 chr10 35397027 35397049 -110192239 + AT_rich Low_complexity Low_complexity 1 22 0 866 235 114 35 chr10 35397397 35397872 -110191416 + L1ME2 LINE L1 4946 5482 -682 270 0 0 0 chr10 35397872 35397902 -110191386 + (CA)n Simple_repeat Simple_repeat 2 31 0 866 235 114 35 chr10 35397902 35398024 -110191264 + L1ME2 LINE L1 5482 5593 -571 399 257 22 11 chr10 35398050 35398191 -110191097 + L1ME2 LINE L1 5999 6145 -17 1240 284 57 15 chr10 35398205 35398606 -110190682 + L1MC4a LINE L1 6348 6765 -1043 804 241 95 7 chr10 35398605 35398900 -110190388 + L1M4 LINE L1 5005 5325 -821 * 255 237 26 0 chr10 35398994 35399070 -110190218 + L1MC4 LINE L1 6995 7072 -970 224 304 25 13 chr10 35399074 35399153 -110190135 + GA-rich Low_complexity Low_complexity 3 82 0 1720 241 109 2 chr10 35399258 35399834 -110189454 + L1MC4 LINE L1 7277 7914 -128 226 276 102 0 chr10 35400033 35400131 -110189157 + L1M LINE L1 5261 5368 -2440 25 31 0 0 chr10 35400189 35400221 -110189067 + AT_rich Low_complexity Low_complexity 1 32 0 3411 150 28 5 chr10 35400221 35400833 -110188455 - L1MB3 LINE L1 -7 6176 5551 671 207 133 7 chr10 35400834 35400984 -110188304 - L1MCa LINE L1 -6228 198 30 331 164 0 0 chr10 35400988 35401049 -110188239 - L1MB8 LINE L1 -304 5874 5814 * 33257 37 18 8 chr10 35401043 35406042 -110183246 - L1PA4 LINE L1 -1 6154 1113 1701 199 6 3 chr10 35406068 35406404 -110182884 - L1MB8 LINE L1 -399 5785 5449 192 229 0 0 chr10 35406600 35406683 -110182605 + (TA)n Simple_repeat Simple_repeat 2 84 0 32 26 0 0 chr10 35406683 35406722 -110182566 + AT_rich Low_complexity Low_complexity 1 39 0 2568 95 5 19 chr10 35406753 35407131 -110182157 - L1PB3 LINE L1 0 6154 5782 358 220 14 35 chr10 35407131 35407272 -110182016 + (CATA)n Simple_repeat Simple_repeat 3 140 0 1545 203 14 3 chr10 35407304 35407653 -110181635 - L1MB8 LINE L1 -1034 5112 4760 * 2332 148 3 0 chr10 35407639 35408025 -110181263 - L1P LINE L1 -1028 5118 4732 246 260 127 27 chr10 35408015 35408165 -110181123 - L1MC/D LINE L1 -1943 5865 5701 * 913 200 17 6 chr10 35408430 35408610 -110180678 + MER5A DNA MER1_type 7 188 -1 308 243 19 39 chr10 35410208 35410311 -110178977 + MER5B DNA MER1_type 1 101 -77 244 200 0 0 chr10 35410305 35410345 -110178943 - MER5B DNA MER1_type -135 43 4 * 740 290 5 0 chr10 35410549 35410756 -110178532 + MER3 DNA MER1_type 1 208 -1 667 82 31 0 chr10 35411526 35411623 -110177665 - L1PA10 LINE L1 -3 6165 6066 21 82 0 0 chr10 35411641 35411690 -110177598 + AT_rich Low_complexity Low_complexity 1 49 0 5872 94 26 0 chr10 35412124 35413401 -110175887 - L1PA10 LINE L1 -107 6061 4757 21 0 0 0 chr10 35413800 35413821 -110175467 + AT_rich Low_complexity Low_complexity 1 21 0 229 360 10 10 chr10 35414400 35414500 -110174788 - MIR SINE MIR -160 102 3 1881 167 147 5 chr10 35414539 35414947 -110174341 - MER31B LTR ERV1 0 466 1 24 0 0 0 chr10 35415119 35415143 -110174145 + AT_rich Low_complexity Low_complexity 1 24 0 413 311 95 26 chr10 35416435 35416625 -110172663 - L3 LINE CR1 -49 1528 1326 665 311 4 13 chr10 35416979 35417207 -110172081 + L1MC3 LINE L1 6304 6529 -1256 264 228 0 0 chr10 35417200 35417257 -110172031 + L1MD3 LINE L1 7908 7964 -31 * 709 227 47 72 chr10 35418631 35419100 -110170188 + L1M4 LINE L1 7 1472 -4831 1118 95 71 0 chr10 35419100 35419269 -110170019 + L1PA14 LINE L1 5981 6161 0 2299 101 3 3 chr10 35419278 35419584 -110169704 + AluSx SINE Alu 3 308 -4 311 357 45 28 chr10 35421024 35421310 -110167978 - L1ME1 LINE L1 0 6166 5876 701 228 170 4 chr10 35422640 35422899 -110166389 + L1M4 LINE L1 4880 5181 -1201 1460 162 0 37 chr10 35422938 35423209 -110166079 - MLT1A1 LTR MaLR 0 365 105 609 246 0 0 chr10 35423213 35423339 -110165949 - HERVL74 LTR ERVL -2060 3625 3500 4366 218 90 21 chr10 35423361 35424818 -110164470 - HERVL74 LTR ERVL -2357 3328 1608 456 19 0 0 chr10 35424818 35424871 -110164417 + (TG)n Simple_repeat Simple_repeat 2 54 0 4366 218 90 21 chr10 35424871 35425424 -110163864 - HERVL74 LTR ERVL -4077 1608 1095 26 74 0 0 chr10 35425448 35425502 -110163786 + AT_rich Low_complexity Low_complexity 1 54 0 267 243 37 28 chr10 35425671 35425778 -110163510 - MER107 DNA MER1_type -22 175 68 1617 196 83 32 chr10 35426261 35426859 -110162429 - L1ME1 LINE L1 -325 5842 5188 3383 188 66 15 chr10 35426882 35426925 -110162363 - L1MB4 LINE L1 -65 6115 6076 3341 198 26 84 chr10 35426925 35427953 -110161335 + LTR5 LTR ERVK 1 969 0 3383 188 66 15 chr10 35427953 35429144 -110160144 - L1MB4 LINE L1 -104 6076 4834 618 234 137 26 chr10 35429183 35429409 -110159879 - L2 LINE L2 -1617 1697 1447 223 227 0 106 chr10 35429425 35429491 -110159797 - L2 LINE L2 0 3313 3255 514 152 235 0 chr10 35429494 35429626 -110159662 - L1ME LINE L1 -665 5499 5337 1890 189 52 14 chr10 35429651 35430106 -110159182 + L1MB4 LINE L1 5522 6004 -161 1501 195 81 0 chr10 35430898 35431205 -110158083 + L1PB4 LINE L1 5821 6152 -4 24 0 0 0 chr10 35433220 35433244 -110156044 + AT_rich Low_complexity Low_complexity 1 24 0 23 54 0 0 chr10 35433876 35433913 -110155375 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr10 35435142 35435163 -110154125 + AT_rich Low_complexity Low_complexity 1 21 0 184 314 39 0 chr10 35435259 35435310 -110153978 - L2 LINE L2 -87 3185 3133 2259 112 0 13 chr10 35435542 35435855 -110153433 + AluSx SINE Alu 4 312 0 216 111 0 0 chr10 35436473 35436509 -110152779 + (A)n Simple_repeat Simple_repeat 1 36 0 282 139 0 0 chr10 35437449 35437492 -110151796 + MER116 DNA Mariner 9 51 -29 22 35 0 0 chr10 35437498 35437527 -110151761 + AT_rich Low_complexity Low_complexity 1 29 0 721 278 120 0 chr10 35438029 35438238 -110151050 + MIR SINE MIR 3 236 -26 215 189 19 0 chr10 35438514 35438567 -110150721 + (CATATA)n Simple_repeat Simple_repeat 1 54 0 1975 141 7 0 chr10 35438781 35439085 -110150203 + AluSx SINE Alu 5 310 -2 218 270 61 108 chr10 35439181 35439329 -110149959 - MIR3 SINE MIR -52 156 16 22 35 0 0 chr10 35439723 35439752 -110149536 + AT_rich Low_complexity Low_complexity 1 29 0 996 164 145 38 chr10 35439962 35440193 -110149095 - L1ME1 LINE L1 -5 6161 5897 1366 89 38 60 chr10 35440193 35440428 -110148860 + MER30 DNA MER1_type 1 230 0 996 164 145 38 chr10 35440428 35440458 -110148830 - L1ME1 LINE L1 -269 5897 5872 2675 235 78 24 chr10 35441102 35442062 -110147226 + L1ME LINE L1 4238 5249 -897 637 168 17 13 chr10 35442069 35442201 -110147087 + L1ME LINE L1 5564 5689 -477 182 309 73 0 chr10 35442387 35442442 -110146846 - MIR SINE MIR -10 252 194 1971 142 35 0 chr10 35443226 35443508 -110145780 - AluSx SINE Alu -20 292 1 38081 69 5 10 chr10 35444643 35450825 -110138463 + L1PA5 LINE L1 5 6153 -1 24 0 0 0 chr10 35450841 35450865 -110138423 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr10 35451882 35451905 -110137383 + AT_rich Low_complexity Low_complexity 1 23 0 1956 143 3 34 chr10 35453160 35453481 -110135807 + AluSx SINE Alu 1 311 -1 299 289 0 87 chr10 35456478 35456582 -110132706 + L2 LINE L2 3218 3312 -1 473 271 25 0 chr10 35457319 35457441 -110131847 - MIR SINE MIR -52 210 86 879 125 0 7 chr10 35458682 35458818 -110130470 + MLT1A1 LTR MaLR 1 135 -230 2064 166 57 15 chr10 35458821 35459224 -110130064 + MSTB LTR MaLR 1 420 -6 1131 191 31 0 chr10 35459229 35459454 -110129834 + MLT1A1 LTR MaLR 133 364 -1 2154 105 14 7 chr10 35459979 35460274 -110129014 + AluSq SINE Alu 1 297 -16 218 342 174 5 chr10 35461080 35461209 -110128079 - L2 LINE L2 -510 2804 2698 204 45 23 45 chr10 35461209 35461253 -110128035 + (TTA)n Simple_repeat Simple_repeat 3 45 0 218 342 174 5 chr10 35461253 35461307 -110127981 - L2 LINE L2 -616 2698 2590 202 290 161 47 chr10 35461416 35461609 -110127679 - L2 LINE L2 -1007 2307 2093 520 169 260 24 chr10 35464622 35464868 -110124420 - MER33 DNA MER1_type -32 292 1 2484 114 28 2 chr10 35465240 35465634 -110123654 - L1MA2 LINE L1 0 6304 5901 358 240 107 117 chr10 35466010 35466402 -110122886 - L1ME4a LINE L1 -4 6117 5730 494 297 108 55 chr10 35466508 35466645 -110122643 - L1ME4a LINE L1 -429 5692 5564 2056 148 36 0 chr10 35466645 35466975 -110122313 - MER2 DNA MER2_type 0 344 3 494 297 108 55 chr10 35466975 35467218 -110122070 - L1ME4a LINE L1 -557 5564 5292 268 215 129 11 chr10 35467791 35467884 -110121404 - L2 LINE L2 -509 2805 2702 196 266 94 86 chr10 35468474 35468602 -110120686 + L2 LINE L2 2706 2834 -480 1940 142 27 0 chr10 35468623 35468919 -110120369 + AluSx SINE Alu 2 305 -7 1433 74 0 0 chr10 35469030 35469206 -110120082 + AluSc SINE Alu 128 303 -6 238 219 53 79 chr10 35470881 35470995 -110118293 + L2 LINE L2 1731 1841 -1473 1418 199 48 12 chr10 35471001 35471338 -110117950 - Tigger3b DNA MER2_type -3 1228 880 441 54 0 0 chr10 35471340 35471396 -110117892 + (TGAG)n Simple_repeat Simple_repeat 1 56 0 2179 141 125 44 chr10 35471470 35471691 -110117597 - Tigger3b DNA MER2_type -2492 536 334 2271 98 0 3 chr10 35471691 35471988 -110117300 + AluSc SINE Alu 1 296 -13 2179 141 125 44 chr10 35471988 35472262 -110117026 - Tigger3b DNA MER2_type -2694 334 1 250 294 44 62 chr10 35472667 35472827 -110116461 - L2 LINE L2 -193 3079 2923 325 353 98 0 chr10 35474075 35474208 -110115080 + L2 LINE L2 3116 3261 -11 432 244 0 0 chr10 35474211 35474293 -110114995 + AluJo SINE Alu 14 95 -217 1098 144 0 30 chr10 35474311 35474478 -110114810 - AluJb SINE Alu -16 296 135 566 204 86 38 chr10 35474478 35474664 -110114624 + AluJo SINE Alu 104 298 -14 358 238 91 62 chr10 35475327 35475537 -110113751 - LTR16C LTR ERVL 0 491 276 2407 58 3 3 chr10 35476945 35477236 -110112052 + AluY SINE Alu 1 291 -20 2013 134 14 0 chr10 35478478 35478770 -110110518 - AluSx SINE Alu -16 296 1 203 365 26 9 chr10 35478929 35479044 -110110244 - L2 LINE L2 -2564 750 634 324 0 0 0 chr10 35479060 35479096 -110110192 + (TG)n Simple_repeat Simple_repeat 2 37 0 617 250 43 0 chr10 35479424 35479564 -110109724 + MIR SINE MIR 116 261 -1 1888 138 140 6 chr10 35480124 35480473 -110108815 + MSTD LTR MaLR 1 396 0 360 325 60 7 chr10 35480802 35480953 -110108335 - MIR SINE MIR -79 183 25 25 51 0 0 chr10 35481430 35481469 -110107819 + AT_rich Low_complexity Low_complexity 1 39 0 402 269 10 0 chr10 35485291 35485395 -110103893 - MIR SINE MIR -73 135 31 341 286 107 74 chr10 35485597 35485988 -110103300 + L2 LINE L2 2081 2484 -830 319 212 59 47 chr10 35486056 35486226 -110103062 - Charlie7 DNA MER1_type -1 2611 2440 236 283 0 0 chr10 35486344 35486397 -110102891 + (TATATG)n Simple_repeat Simple_repeat 5 57 0 25 0 0 0 chr10 35488022 35488047 -110101241 + AT_rich Low_complexity Low_complexity 1 25 0 1803 160 14 0 chr10 35488053 35488340 -110100948 + AluJb SINE Alu 1 291 -21 584 244 124 16 chr10 35488564 35488757 -110100531 + MIR SINE MIR 14 227 -35 307 274 84 11 chr10 35488797 35488892 -110100396 - MIR SINE MIR -108 154 53 311 232 133 88 chr10 35489116 35489297 -110099991 + L1M2 LINE L1 1159 1347 -5502 336 290 206 61 chr10 35489329 35489628 -110099660 + L1M2 LINE L1 370 625 -6224 258 81 0 0 chr10 35489628 35489665 -110099623 + (CCCCCG)n Simple_repeat Simple_repeat 1 37 0 336 290 206 61 chr10 35489665 35490017 -110099271 + L1M2 LINE L1 625 1115 -5734 205 254 0 30 chr10 35491482 35491549 -110097739 + L2 LINE L2 3208 3272 0 347 151 0 41 chr10 35492272 35492345 -110096943 - MER94 DNA DNA -64 70 1 1084 143 71 91 chr10 35492955 35493207 -110096081 + AluJo SINE Alu 42 288 -24 279 0 0 0 chr10 35493379 35493410 -110095878 + (T)n Simple_repeat Simple_repeat 1 31 0 22 0 0 0 chr10 35494054 35494076 -110095212 + AT_rich Low_complexity Low_complexity 1 22 0 1434 136 33 0 chr10 35495497 35495711 -110093577 - AluSq SINE Alu -10 303 83 2265 110 0 3 chr10 35495741 35496042 -110093246 + AluSx SINE Alu 1 300 -12 434 263 120 0 chr10 35496043 35496176 -110093112 - MIR SINE MIR -113 149 1 807 208 76 0 chr10 35496285 35496429 -110092859 + FRAM SINE Alu 2 156 -10 2298 118 0 0 chr10 35496434 35496739 -110092549 - AluSx SINE Alu -7 305 1 397 380 88 0 chr10 35497167 35497372 -110091916 + L2 LINE L2 2818 3040 -273 5629 174 51 28 chr10 35497388 35498486 -110090802 + L1MB2 LINE L1 4004 5075 -1096 2217 125 0 0 chr10 35498486 35498789 -110090499 - AluSq SINE Alu -10 303 1 5629 174 51 28 chr10 35498789 35499119 -110090169 + L1MB2 LINE L1 5075 5396 -775 195 42 0 0 chr10 35499119 35499143 -110090145 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 5629 174 51 28 chr10 35499143 35499831 -110089457 + L1MB2 LINE L1 5396 6171 0 368 300 119 19 chr10 35499831 35499991 -110089297 + L1MC4a LINE L1 6611 6786 -1022 356 287 36 24 chr10 35500351 35500518 -110088770 + L1MC4 LINE L1 6893 7061 -981 2124 138 3 0 chr10 35500574 35500872 -110088416 + AluSx SINE Alu 1 299 -13 433 264 126 45 chr10 35500896 35501278 -110088010 + L1MC5 LINE L1 7507 7919 -42 2116 124 0 7 chr10 35501329 35501628 -110087660 + AluSx SINE Alu 1 297 -15 185 262 131 0 chr10 35502405 35502489 -110086799 + L3 LINE CR1 692 786 -791 392 229 180 49 chr10 35503204 35503387 -110085901 + MIR SINE MIR 2 208 -54 301 339 52 31 chr10 35503672 35503864 -110085424 + L3b LINE CR1 1120 1315 -268 240 302 81 0 chr10 35504732 35504818 -110084470 + L3b LINE CR1 1392 1484 -99 1772 164 20 3 chr10 35505348 35505646 -110083642 + AluJo SINE Alu 1 303 -9 2310 82 14 7 chr10 35505732 35506026 -110083262 + AluSp SINE Alu 1 296 -17 22 0 0 0 chr10 35506608 35506630 -110082658 + AT_rich Low_complexity Low_complexity 1 22 0 922 128 0 0 chr10 35506635 35506760 -110082528 - AluJb SINE Alu -187 125 1 2244 168 20 74 chr10 35507163 35507650 -110081638 + LOR1b LTR ERV1 1 461 0 2478 85 0 3 chr10 35507907 35508212 -110081076 - AluSx SINE Alu -8 304 1 616 140 0 27 chr10 35509255 35509354 -110079934 + L1PB2 LINE L1 6024 6112 -39 2241 115 3 0 chr10 35509354 35509658 -110079630 - AluSg SINE Alu -5 305 1 616 140 0 27 chr10 35509658 35509696 -110079592 + L1PB2 LINE L1 6112 6150 -1 268 217 58 0 chr10 35509698 35509767 -110079521 + MER5C DNA MER1_type 52 124 -200 296 215 0 0 chr10 35509777 35509842 -110079446 + MER5C DNA MER1_type 226 290 -34 213 151 0 75 chr10 35509881 35509934 -110079354 + MER5C DNA MER1_type 273 321 -3 387 0 0 0 chr10 35510211 35510254 -110079034 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 6362 49 1 4 chr10 35510255 35510988 -110078300 - L1PA6 LINE L1 -13 6141 5411 186 323 73 0 chr10 35510996 35511092 -110078196 - MIR SINE MIR -1 261 159 635 222 116 0 chr10 35511243 35511441 -110077847 + MIR SINE MIR 39 259 -3 2343 94 0 7 chr10 35511824 35512131 -110077157 + AluSx SINE Alu 1 305 -7 355 269 135 10 chr10 35512131 35512235 -110077053 + L2 LINE L2 3197 3313 0 1293 169 65 4 chr10 35513089 35513367 -110075921 - AluJo SINE Alu -17 295 1 266 200 0 0 chr10 35513428 35513473 -110075815 + L3 LINE CR1 1526 1570 -7 967 203 0 0 chr10 35514189 35514347 -110074941 - FRAM SINE Alu -8 158 1 250 319 0 0 chr10 35514348 35514417 -110074871 + L2 LINE L2 3245 3313 0 1759 124 0 12 chr10 35514467 35514717 -110074571 - AluSx SINE Alu -11 301 55 185 289 26 0 chr10 35514741 35514779 -110074509 + L2 LINE L2 3147 3185 -87 369 235 118 0 chr10 35515088 35515241 -110074047 + L1ME4a LINE L1 5713 5883 -238 440 247 114 55 chr10 35515247 35515518 -110073770 + MLT1L LTR MaLR 2 288 -327 247 248 57 67 chr10 35515972 35516077 -110073211 + MLT1L LTR MaLR 504 607 -8 342 167 8 108 chr10 35516141 35516261 -110073027 + L1ME4a LINE L1 6007 6114 -7 1956 135 7 3 chr10 35516272 35516561 -110072727 - AluSx SINE Alu -22 290 1 2143 107 10 3 chr10 35516828 35517127 -110072161 + AluSq SINE Alu 1 301 -12 223 261 87 33 chr10 35517160 35517252 -110072036 - MIR SINE MIR -54 208 112 413 207 12 0 chr10 35517394 35517476 -110071812 - MLT1K LTR MaLR -14 574 492 1047 258 9 0 chr10 35518058 35518271 -110071017 - MER58A DNA MER1_type -1 223 9 1785 161 20 7 chr10 35518571 35518875 -110070413 + AluJb SINE Alu 1 308 -4 1884 126 13 31 chr10 35519671 35519988 -110069300 - AluJb SINE Alu -1 311 1 207 0 0 0 chr10 35520449 35520472 -110068816 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 1147 195 26 4 chr10 35520609 35520835 -110068453 - L1MB3 LINE L1 0 6183 5953 2502 142 10 116 chr10 35520953 35521110 -110068178 - L1MB3 LINE L1 -210 5973 5801 2216 120 0 0 chr10 35521110 35521410 -110067878 - AluSx SINE Alu -12 300 1 2502 142 10 116 chr10 35521410 35521669 -110067619 - L1MB3 LINE L1 -382 5801 5634 1972 158 0 0 chr10 35521669 35521980 -110067308 - AluSx SINE Alu -1 311 1 2502 142 10 116 chr10 35521980 35522148 -110067140 - L1MB3 LINE L1 -549 5634 5450 523 115 26 0 chr10 35523233 35523311 -110065977 - L1MC1 LINE L1 0 6333 6254 2358 155 86 41 chr10 35523316 35523512 -110065776 - L1MC3 LINE L1 -661 5683 5497 2125 134 0 0 chr10 35523512 35523804 -110065484 - AluSx SINE Alu -20 292 1 2358 155 86 41 chr10 35523804 35524199 -110065089 - L1MC3 LINE L1 -847 5497 5302 2700 92 3 72 chr10 35524199 35524588 -110064700 - THE1B LTR MaLR -2 362 1 2358 155 86 41 chr10 35524588 35524731 -110064557 - L1MC3 LINE L1 -1042 5302 5167 1822 164 29 0 chr10 35525035 35525336 -110063952 + AluSx SINE Alu 1 309 0 1603 169 14 14 chr10 35525362 35525657 -110063631 + L1MC2 LINE L1 6041 6335 -9 2183 105 14 0 chr10 35525871 35526157 -110063131 - AluSg SINE Alu -20 290 1 4783 81 24 5 chr10 35526392 35527020 -110062268 - L1PA13 LINE L1 0 6163 5524 327 259 68 68 chr10 35527020 35527167 -110062121 + MLT1E1 LTR MaLR 4 150 -504 1324 188 84 82 chr10 35527228 35527595 -110061693 + MLT1E1 LTR MaLR 287 654 0 268 298 47 35 chr10 35528305 35528476 -110060812 + HAL1 LINE L1 1179 1351 -1156 306 157 0 0 chr10 35528513 35528564 -110060724 - LTR40b LTR ERVL 0 462 412 2136 108 17 0 chr10 35528965 35529253 -110060035 + AluSg SINE Alu 1 293 -17 327 49 0 0 chr10 35529253 35529294 -110059994 + (TA)n Simple_repeat Simple_repeat 2 42 0 1616 188 10 16 chr10 35529425 35529734 -110059554 + AluJb SINE Alu 1 307 -5 1209 167 12 124 chr10 35529908 35530238 -110059050 - MLT1A1 LTR MaLR 0 365 73 2205 125 0 0 chr10 35530259 35530563 -110058725 - AluSp SINE Alu -9 304 1 1810 158 0 7 chr10 35530569 35530853 -110058435 - L1PA16 LINE L1 -11 6155 5874 9559 182 29 9 chr10 35530853 35533198 -110056090 - L1PA16 LINE L1 -508 5658 3268 1623 272 35 2 chr10 35533199 35533718 -110055570 + L1PA16 LINE L1 2725 3260 -2886 378 165 25 25 chr10 35533718 35533797 -110055491 - MLT1A1 LTR MaLR -344 84 6 384 275 116 51 chr10 35534208 35534484 -110054804 + L1MC4a LINE L1 5613 5906 -1902 744 155 16 16 chr10 35534530 35534659 -110054629 + FLAM_C SINE Alu 2 130 -3 227 270 90 18 chr10 35534684 35534795 -110054493 + L1ME4a LINE L1 5978 6096 -25 2583 113 5 24 chr10 35534834 35535205 -110054083 - THE1B LTR MaLR 0 364 1 3509 167 16 18 chr10 35535207 35535813 -110053475 + MER6A DNA MER2_type 1 605 0 2106 112 3 14 chr10 35536511 35536825 -110052463 - AluSq SINE Alu 0 313 1 1353 124 9 40 chr10 35536827 35537052 -110052236 - AluJo SINE Alu -17 295 78 253 174 158 0 chr10 35537968 35538040 -110051248 - MIR SINE MIR -77 131 49 2077 136 0 0 chr10 35538449 35538751 -110050537 + AluSx SINE Alu 1 302 -10 2175 118 3 0 chr10 35539059 35539355 -110049933 - AluSx SINE Alu -15 297 1 1687 148 7 40 chr10 35539519 35539654 -110049634 + AluJb SINE Alu 1 139 -173 2094 86 3 46 chr10 35539654 35540137 -110049151 + AluSq SINE Alu 1 470 0 1124 6 22 50 chr10 35539957 35540180 -110049108 + (TAAAA)n Simple_repeat Simple_repeat 3 220 0 1687 148 7 40 chr10 35540137 35540339 -110048949 + AluJb SINE Alu 139 288 -24 23 68 0 0 chr10 35540471 35540515 -110048773 + AT_rich Low_complexity Low_complexity 1 44 0 183 295 158 21 chr10 35541967 35542062 -110047226 - MIR SINE MIR -108 154 47 1751 155 3 3 chr10 35542915 35543199 -110046089 - AluJo SINE Alu -8 304 21 6040 78 24 63 chr10 35543282 35544232 -110045056 + L1PA11 LINE L1 5266 6174 0 2298 97 0 7 chr10 35544646 35544944 -110044344 + AluSg SINE Alu 1 296 -14 5282 128 63 73 chr10 35545057 35546184 -110043104 + pTR5 LTR ERV1 742 2029 -409 305 152 58 68 chr10 35546184 35546287 -110043001 + LTR30 LTR ERV1 377 475 -94 1146 151 59 0 chr10 35546287 35546473 -110042815 + LTR12 LTR ERV1 385 581 -133 1447 190 3 40 chr10 35546522 35546801 -110042487 + AluJo SINE Alu 1 270 -32 2224 108 0 0 chr10 35546801 35547096 -110042192 - AluSq SINE Alu -18 295 1 1447 190 3 40 chr10 35547096 35547116 -110042172 + AluJo SINE Alu 270 289 -13 2157 143 33 6 chr10 35548394 35548759 -110040529 - THE1C LTR MaLR 0 375 1 762 238 38 0 chr10 35549103 35549288 -110040000 - L1MC/D LINE L1 -1986 5822 5631 26 0 0 0 chr10 35549579 35549605 -110039683 + AT_rich Low_complexity Low_complexity 1 26 0 309 219 21 42 chr10 35549737 35549833 -110039455 - HAL1b LINE L1 -989 359 266 258 108 0 0 chr10 35550157 35550194 -110039094 + MSTA LTR MaLR 247 283 -145 806 141 8 0 chr10 35550628 35550749 -110038539 + FLAM_C SINE Alu 2 123 -10 21 0 0 0 chr10 35550749 35550770 -110038518 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr10 35551735 35551764 -110037524 + AT_rich Low_complexity Low_complexity 1 29 0 5406 43 1 1 chr10 35551774 35552421 -110036867 - L1PA8 LINE L1 -7 6165 5519 225 299 0 0 chr10 35552861 35552938 -110036350 - MLT1I LTR MaLR -229 180 104 1046 140 7 0 chr10 35553031 35553181 -110036107 + AluSq/x SINE Alu 1 151 -161 529 240 12 8 chr10 35553183 35553308 -110035980 + L1PB4 LINE L1 6030 6151 0 441 244 64 58 chr10 35553492 35553556 -110035732 - MIR SINE MIR -73 189 127 2430 98 0 0 chr10 35553556 35553863 -110035425 + AluSx SINE Alu 1 307 -5 441 244 64 58 chr10 35553863 35553954 -110035334 - MIR SINE MIR -135 127 33 747 151 8 8 chr10 35555186 35555305 -110033983 + FLAM_C SINE Alu 9 127 -16 180 0 0 0 chr10 35555306 35555326 -110033962 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 202 146 0 24 chr10 35555614 35555655 -110033633 + (TTTAA)n Simple_repeat Simple_repeat 4 43 0 1894 148 26 7 chr10 35556248 35556679 -110032609 - AluSx SINE Alu 0 437 1 490 216 29 22 chr10 35556822 35556961 -110032327 - MLT1J2 LTR MaLR -290 160 21 339 285 33 117 chr10 35557048 35557419 -110031869 + L2 LINE L2 2746 3089 -183 324 265 20 41 chr10 35557539 35557637 -110031651 - MLT1J2 LTR MaLR -18 432 337 488 377 0 0 chr10 35559356 35559510 -110029778 + MIR3 SINE MIR 44 197 -11 1267 61 0 11 chr10 35560140 35560320 -110028968 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 2176 99 0 14 chr10 35560320 35560604 -110028684 - AluSq SINE Alu -33 280 1 531 220 75 61 chr10 35560813 35561054 -110028234 - LTR1B LTR ERV1 -383 443 149 1673 176 19 38 chr10 35561275 35561588 -110027700 - AluJo SINE Alu -1 311 5 1961 162 0 13 chr10 35561642 35561951 -110027337 - AluJb SINE Alu -7 305 1 189 0 0 0 chr10 35562365 35562386 -110026902 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 1925 141 0 7 chr10 35562721 35563005 -110026283 - AluJo SINE Alu -30 282 1 315 273 126 22 chr10 35563393 35563576 -110025712 - MIR SINE MIR -17 245 44 1835 166 0 10 chr10 35563903 35564205 -110025083 - AluJb SINE Alu -13 299 1 22 35 0 0 chr10 35565828 35565857 -110023431 + AT_rich Low_complexity Low_complexity 1 29 0 1819 131 0 0 chr10 35565858 35566117 -110023171 + AluSx SINE Alu 47 305 -7 21 0 0 0 chr10 35566172 35566193 -110023095 + AT_rich Low_complexity Low_complexity 1 21 0 1787 113 0 4 chr10 35566290 35566537 -110022751 - AluSg/x SINE Alu 0 310 65 1268 152 0 33 chr10 35566832 35567036 -110022252 + AluJb SINE Alu 86 284 -28 2301 104 3 3 chr10 35567036 35567334 -110021954 - AluSg SINE Alu -12 298 1 25 0 0 0 chr10 35567341 35567366 -110021922 + AT_rich Low_complexity Low_complexity 1 25 0 2117 123 0 16 chr10 35568606 35568916 -110020372 - AluJb SINE Alu -7 305 1 3654 184 124 33 chr10 35568979 35570383 -110018905 + MER52A LTR ERV1 2 1755 0 296 319 115 6 chr10 35570402 35570559 -110018729 + MIR SINE MIR 66 239 -23 1859 166 3 10 chr10 35570952 35571260 -110018028 + AluJo SINE Alu 1 306 -6 540 267 91 9 chr10 35571926 35572136 -110017152 - MIR SINE MIR -24 238 12 2094 146 0 0 chr10 35572227 35572535 -110016753 + AluJb SINE Alu 1 308 -4 258 136 0 0 chr10 35572543 35572587 -110016701 + (GGAA)n Simple_repeat Simple_repeat 3 46 0 1111 184 209 0 chr10 35574784 35575041 -110014247 + AluJb SINE Alu 1 306 0 21 71 0 0 chr10 35575262 35575304 -110013984 + AT_rich Low_complexity Low_complexity 1 42 0 594 187 28 0 chr10 35575380 35575487 -110013801 + FLAM_C SINE Alu 2 111 -32 279 0 0 0 chr10 35575488 35575519 -110013769 + (TC)n Simple_repeat Simple_repeat 2 32 0 234 0 0 0 chr10 35575518 35575544 -110013744 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 2508 64 0 3 chr10 35575545 35575841 -110013447 - AluY SINE Alu -16 295 1 246 296 28 0 chr10 35576016 35576087 -110013201 - MIR SINE MIR -177 85 13 367 306 104 2 chr10 35576961 35577134 -110012154 - MIR3 SINE MIR 0 208 18 1250 96 0 0 chr10 35577304 35577471 -110011817 - AluSg/x SINE Alu -9 301 135 2519 157 6 66 chr10 35577654 35578106 -110011182 - LTR24 LTR ERV1 0 467 46 2145 131 0 28 chr10 35578106 35578427 -110010861 + AluSx SINE Alu 1 312 0 2519 157 6 66 chr10 35578427 35578471 -110010817 - LTR24 LTR ERV1 -421 46 1 1792 130 15 52 chr10 35578507 35578616 -110010672 + AluSx SINE Alu 1 113 -199 2296 108 0 19 chr10 35578616 35578932 -110010356 + AluSg SINE Alu 1 310 0 1792 130 15 52 chr10 35578932 35579146 -110010142 + AluSx SINE Alu 113 312 0 3297 147 24 17 chr10 35579354 35579529 -110009759 - LTR49 LTR ERV1 0 595 423 970 77 7 28 chr10 35579529 35579672 -110009616 - L1PA10 LINE L1 0 6168 6029 3297 147 24 17 chr10 35579672 35580087 -110009201 - LTR49 LTR ERV1 -172 423 1 1452 159 7 43 chr10 35580429 35580730 -110008558 - LTR1 LTR ERV1 -495 290 1 1103 112 19 9 chr10 35580730 35580888 -110008400 - L1PB3 LINE L1 -198 5953 5802 294 73 0 0 chr10 35580888 35580929 -110008359 + (TG)n Simple_repeat Simple_repeat 1 41 0 1103 112 19 9 chr10 35580929 35580956 -110008332 - L1PB3 LINE L1 -349 5802 5777 272 257 20 20 chr10 35580956 35581057 -110008231 + (TATG)n Simple_repeat Simple_repeat 3 103 0 1544 103 13 13 chr10 35581057 35581069 -110008219 - L1PB3 LINE L1 -363 5791 5780 183 42 0 0 chr10 35581069 35581093 -110008195 + (TC)n Simple_repeat Simple_repeat 1 24 0 1544 103 13 13 chr10 35581093 35581313 -110007975 - L1PB3 LINE L1 -373 5781 5559 3697 138 43 129 chr10 35581313 35582836 -110006452 + pTR5 LTR ERV1 744 2606 0 831 149 8 8 chr10 35582836 35582970 -110006318 + pTR5 LTR ERV1 270 403 -2035 2707 173 59 1 chr10 35582970 35583795 -110005493 - L1PB3 LINE L1 -613 5541 4668 792 134 195 0 chr10 35583798 35583947 -110005341 - LTR29 LTR ERV1 -285 337 160 616 172 10 0 chr10 35583976 35584075 -110005213 - AluJ/FLAM SINE Alu -211 101 2 297 309 62 48 chr10 35586730 35586940 -110002348 - MIR SINE MIR -3 259 47 1667 166 14 21 chr10 35587220 35587541 -110001747 + AluJo SINE Alu 1 319 0 3328 151 24 12 chr10 35588229 35588804 -110000484 - LTR49 LTR ERV1 -13 582 1 912 192 30 0 chr10 35589131 35589298 -109999990 - FRAM SINE Alu 0 176 5 3532 130 6 6 chr10 35589298 35589822 -109999466 + MER41B LTR ERV1 5 528 -107 24 32 0 0 chr10 35589828 35589859 -109999429 + AT_rich Low_complexity Low_complexity 1 31 0 854 84 42 0 chr10 35590713 35590832 -109998456 + MER41B LTR ERV1 512 635 0 257 269 0 0 chr10 35590843 35590910 -109998378 - MIR SINE MIR -56 152 86 421 288 59 51 chr10 35591582 35591818 -109997470 + Charlie8 DNA MER1_type 2 239 -2178 4600 86 13 0 chr10 35592003 35592623 -109996665 - L1PB2 LINE L1 -2 6149 5522 277 379 26 9 chr10 35592650 35592766 -109996522 - L2 LINE L2 -1 3312 3195 1889 204 105 11 chr10 35593076 35593428 -109995860 + MLT1D LTR MaLR 3 409 -96 1731 159 3 36 chr10 35593428 35593729 -109995559 - AluJo SINE Alu -21 291 1 1889 204 105 11 chr10 35593729 35593833 -109995455 + MLT1D LTR MaLR 409 502 -3 4180 102 14 55 chr10 35594724 35595251 -109994037 + L1MA3 LINE L1 5637 6131 -174 2165 106 6 39 chr10 35595251 35595562 -109993726 + AluSx SINE Alu 3 303 -9 4180 102 14 55 chr10 35595562 35595722 -109993566 + L1MA3 LINE L1 6131 6296 -9 2090 131 89 6 chr10 35596474 35596810 -109992478 + THE1B LTR MaLR 1 364 0 313 312 76 19 chr10 35597355 35597460 -109991828 + MIR SINE MIR 55 173 -89 2274 150 44 3 chr10 35597460 35597847 -109991441 + MER57A LTR ERV1 1 403 0 313 312 76 19 chr10 35597847 35597898 -109991390 + MIR SINE MIR 173 220 -42 2439 90 0 0 chr10 35597971 35598271 -109991017 + AluSq SINE Alu 1 300 -13 768 176 68 7 chr10 35598410 35598558 -109990730 + MER58A DNA MER1_type 37 193 -31 2191 132 0 0 chr10 35598562 35598872 -109990416 - AluSx SINE Alu -2 310 1 578 291 94 0 chr10 35598945 35599158 -109990130 - MLT1J LTR MaLR -278 233 1 947 195 95 0 chr10 35599373 35599573 -109989715 - MER20 DNA MER1_type 0 219 1 323 271 62 10 chr10 35600022 35600118 -109989170 - MER5A DNA MER1_type -8 181 81 1992 153 0 0 chr10 35601079 35601380 -109987908 + AluSx SINE Alu 1 301 -11 242 291 19 12 chr10 35601452 35601547 -109987741 + T-rich Low_complexity Low_complexity 2 163 0 625 112 0 35 chr10 35601712 35601828 -109987460 + (TTCC)n Simple_repeat Simple_repeat 2 113 0 777 186 23 0 chr10 35601858 35601987 -109987301 - FLAM_C SINE Alu 0 133 2 2481 176 32 0 chr10 35602457 35602889 -109986399 - MLT1C LTR MaLR 0 467 22 363 229 25 42 chr10 35602962 35603080 -109986208 - MER96B DNA MER1_type? -2 415 300 1301 195 74 27 chr10 35603107 35603405 -109985883 - AluJo SINE Alu 0 312 1 300 185 0 49 chr10 35603406 35603487 -109985801 - MER96B DNA MER1_type? -100 317 241 198 0 0 0 chr10 35603886 35603908 -109985380 + (T)n Simple_repeat Simple_repeat 1 22 0 5223 147 18 23 chr10 35604188 35605096 -109984192 + MER4D LTR ERV1 1 903 0 2550 116 6 3 chr10 35605714 35606077 -109983211 - THE1B LTR MaLR 0 364 1 347 272 72 50 chr10 35606149 35606329 -109982959 + MIR3 SINE MIR 23 206 -2 228 330 0 9 chr10 35607303 35607409 -109981879 + (CA)n Simple_repeat Simple_repeat 1 105 0 2366 93 0 0 chr10 35607419 35607710 -109981578 - AluSx SINE Alu -19 293 3 1196 106 12 0 chr10 35608015 35608175 -109981113 + FRAM SINE Alu 2 163 -13 2194 113 0 0 chr10 35608406 35608699 -109980589 - AluSx SINE Alu -19 293 1 2210 204 81 38 chr10 35609167 35609312 -109979976 + MLT1E3 LTR MaLR 7 144 -480 2073 129 0 0 chr10 35609312 35609689 -109979599 + AluSc SINE Alu 1 377 0 2210 204 81 38 chr10 35609689 35610126 -109979162 + MLT1E3 LTR MaLR 144 615 -9 1411 162 128 26 chr10 35611174 35611440 -109977848 - AluJo SINE Alu -16 296 4 2226 125 3 0 chr10 35611499 35611810 -109977478 - AluSx SINE Alu 0 312 1 4537 131 10 19 chr10 35612164 35612520 -109976768 - L1PB3 LINE L1 -4 6150 5792 420 20 0 0 chr10 35612520 35612569 -109976719 + (TG)n Simple_repeat Simple_repeat 1 49 0 2765 99 0 0 chr10 35612569 35612931 -109976357 + THE1B LTR MaLR 3 364 0 4537 131 10 19 chr10 35612931 35613293 -109975995 - L1PB3 LINE L1 -360 5794 5438 430 174 35 0 chr10 35613941 35614027 -109975261 + MER81 DNA DNA 26 114 0 383 244 0 0 chr10 35614147 35614237 -109975051 + MLT1J LTR MaLR 415 504 -7 265 85 213 0 chr10 35615345 35615392 -109973896 - AluJo SINE Alu -4 298 242 1217 158 15 0 chr10 35615392 35615588 -109973700 - AluJo SINE Alu -113 199 1 1743 184 0 13 chr10 35616308 35616612 -109972676 + AluJo SINE Alu 1 300 -12 359 352 31 0 chr10 35618127 35618255 -109971033 - L2 LINE L2 0 3272 3141 328 53 0 105 chr10 35618300 35618357 -109970931 + L1MA3 LINE L1 6255 6305 0 681 297 32 11 chr10 35618705 35618890 -109970398 - MLT1I LTR MaLR -188 221 33 22 35 0 0 chr10 35620033 35620062 -109969226 + AT_rich Low_complexity Low_complexity 1 29 0 1880 176 0 3 chr10 35620548 35620850 -109968438 - AluJo SINE Alu -11 301 1 2556 115 8 8 chr10 35622019 35622394 -109966894 + THE1C LTR MaLR 1 375 0 276 313 77 66 chr10 35622710 35623180 -109966108 - L2 LINE L2 -1117 2197 1723 773 171 0 0 chr10 35623214 35623337 -109965951 - FLAM_C SINE Alu -20 123 1 3070 113 9 0 chr10 35623510 35623960 -109965328 + L1PA16 LINE L1 5704 6157 -9 442 286 136 14 chr10 35623979 35624192 -109965096 - MIR SINE MIR -21 241 3 1583 113 12 8 chr10 35624341 35624598 -109964690 + MER6 DNA MER2_type 319 836 -29 1757 148 26 23 chr10 35625236 35625540 -109963748 - AluJo SINE Alu -3 309 5 2143 123 50 36 chr10 35626901 35627260 -109962028 + THE1B LTR MaLR 1 364 0 219 265 20 34 chr10 35627888 35628035 -109961253 + (TATAA)n Simple_repeat Simple_repeat 5 149 0 2534 139 23 77 chr10 35629169 35629778 -109959510 - MER4E LTR ERV1 0 779 1 186 43 0 0 chr10 35629803 35629826 -109959462 + (TTCTCC)n Simple_repeat Simple_repeat 1 23 0 1725 178 0 17 chr10 35629826 35630124 -109959164 - AluJb SINE Alu -9 303 11 24 32 0 0 chr10 35630200 35630231 -109959057 + AT_rich Low_complexity Low_complexity 1 31 0 3067 235 35 34 chr10 35630619 35630813 -109958475 - L1ME1 LINE L1 -14 6152 5960 379 82 0 184 chr10 35630813 35630911 -109958377 - MADE1 DNA Mariner 0 80 1 3067 235 35 34 chr10 35630911 35631687 -109957601 - L1ME1 LINE L1 -206 5960 5182 1577 153 73 11 chr10 35631745 35632020 -109957268 - AluJo SINE Alu -20 292 1 1472 196 41 4 chr10 35632786 35633057 -109956231 + AluJo SINE Alu 6 286 -26 222 62 0 0 chr10 35633062 35633094 -109956194 + (CATA)n Simple_repeat Simple_repeat 2 33 0 186 43 0 0 chr10 35633690 35633713 -109955575 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 1395 164 0 9 chr10 35634661 35634875 -109954413 - AluSg/x SINE Alu -16 296 85 2486 156 95 5 chr10 35636089 35636574 -109952714 - MER61D LTR ERV1 0 734 1 1728 236 52 82 chr10 35636994 35637553 -109951735 + MLT1F1 LTR MaLR 1 567 0 302 309 16 8 chr10 35637553 35637679 -109951609 + L1ME4a LINE L1 5748 5874 -247 21 36 0 0 chr10 35638042 35638070 -109951218 + AT_rich Low_complexity Low_complexity 1 28 0 1893 153 3 0 chr10 35638128 35638416 -109950872 + AluSx SINE Alu 20 308 -4 2427 199 125 61 chr10 35638649 35639425 -109949863 + LTR1B LTR ERV1 1 826 0 188 316 246 6 chr10 35639884 35640055 -109949233 + MIR SINE MIR 40 251 -11 216 0 0 0 chr10 35640449 35640473 -109948815 + (T)n Simple_repeat Simple_repeat 1 24 0 562 283 50 30 chr10 35640849 35641047 -109948241 - MIR SINE MIR -33 229 28 595 337 104 19 chr10 35642820 35643233 -109946055 - L3b LINE CR1 -11 1572 1125 268 136 0 0 chr10 35644306 35644350 -109944938 + MADE1 DNA Mariner 1 44 -36 2054 98 28 0 chr10 35644366 35644653 -109944635 - L1PA10 LINE L1 -8 6160 5866 338 77 0 19 chr10 35644653 35644705 -109944583 + MADE1 DNA Mariner 30 80 0 252 343 66 29 chr10 35645093 35645230 -109944058 - MIR3 SINE MIR -30 178 37 260 297 25 25 chr10 35646339 35646457 -109942831 + L3 LINE CR1 1390 1507 -70 2150 124 0 0 chr10 35647599 35647890 -109941398 + AluSg SINE Alu 1 291 -19 186 322 17 0 chr10 35647978 35648037 -109941251 + MIR SINE MIR 82 141 -67 234 229 152 76 chr10 35648938 35649043 -109940245 - MIR SINE MIR -62 146 34 266 261 0 14 chr10 35650642 35650711 -109938577 - MIR3 SINE MIR -52 156 89 225 253 10 111 chr10 35650867 35650966 -109938322 - MER5A DNA MER1_type -13 176 88 211 313 45 0 chr10 35651874 35651941 -109937347 + MIR SINE MIR 42 111 -97 463 293 100 30 chr10 35652129 35652399 -109936889 + L3b LINE CR1 1129 1417 -166 1252 241 96 14 chr10 35652438 35652803 -109936485 - MLT1G LTR MaLR -1 589 195 4315 180 8 25 chr10 35652879 35653730 -109935558 - L1MA10 LINE L1 0 6334 5498 749 143 0 0 chr10 35653730 35653842 -109935446 + L1MA10 LINE L1 5370 5481 -831 356 315 64 28 chr10 35653842 35654022 -109935266 - MLT1G LTR MaLR -364 191 9 216 268 121 76 chr10 35654049 35654206 -109935082 - L2 LINE L2 0 3272 3109 737 282 4 61 chr10 35655183 35655460 -109933828 - MIR SINE MIR -1 261 1 1777 186 0 0 chr10 35655526 35655838 -109933450 - AluSx SINE Alu 0 312 1 195 353 73 0 chr10 35655957 35656025 -109933263 - L2 LINE L2 0 3272 3200 1864 87 65 4 chr10 35656249 35656525 -109932763 - AluSg SINE Alu -17 293 1 379 235 118 15 chr10 35656528 35656664 -109932624 - MIR SINE MIR -7 255 106 1477 195 0 17 chr10 35656837 35657124 -109932164 - AluJo SINE Alu -20 292 11 25 0 0 0 chr10 35658840 35658865 -109930423 + AT_rich Low_complexity Low_complexity 1 25 0 573 140 0 65 chr10 35658865 35658972 -109930316 - FRAM SINE Alu -15 161 62 1692 141 60 20 chr10 35659451 35659750 -109929538 + AluSx SINE Alu 1 311 -1 837 169 29 3 chr10 35660148 35660471 -109928817 + CT-rich Low_complexity Low_complexity 1 331 0 917 168 7 0 chr10 35660475 35660630 -109928658 - AluSg/x SINE Alu -32 278 123 2157 72 0 10 chr10 35660645 35660936 -109928352 - AluY SINE Alu -16 295 8 262 340 31 0 chr10 35661258 35661355 -109927933 + MIR3 SINE MIR 58 157 -51 418 156 0 13 chr10 35662661 35662738 -109926550 + MER116 DNA Mariner 1 76 -4 778 187 7 14 chr10 35662939 35663078 -109926210 + AluJo SINE Alu 2 139 -173 1590 191 29 38 chr10 35663506 35663623 -109925665 - MER1B DNA MER1_type -2373 337 220 2367 80 0 0 chr10 35663623 35663923 -109925365 - AluSc SINE Alu -9 300 1 1590 191 29 38 chr10 35663923 35664145 -109925143 - MER1B DNA MER1_type -2490 220 1 207 250 59 15 chr10 35664176 35664244 -109925044 - L3b LINE CR1 -231 1352 1282 249 314 80 40 chr10 35664518 35664559 -109924729 + L2 LINE L2 2565 2603 -711 1554 169 47 14 chr10 35664559 35664855 -109924433 - AluJo SINE Alu -6 306 1 249 314 80 40 chr10 35664855 35664988 -109924300 + L2 LINE L2 2603 2746 -568 227 280 136 30 chr10 35665094 35665226 -109924062 + L2 LINE L2 2933 3078 -194 4374 64 4 0 chr10 35665266 35665812 -109923476 - L1PA7 LINE L1 -16 6138 5591 2339 147 26 8 chr10 35666781 35667161 -109922127 + LTR45B LTR ERV1 3 389 -100 2989 177 34 72 chr10 35667208 35667887 -109921401 + L1PB4 LINE L1 5493 6145 -11 180 0 0 0 chr10 35667888 35667908 -109921380 + (CAAT)n Simple_repeat Simple_repeat 2 21 0 2187 131 0 0 chr10 35667999 35668311 -109920977 - AluSx SINE Alu 0 312 1 333 288 58 63 chr10 35669243 35669434 -109919854 - MIR SINE MIR -67 195 6 253 322 0 0 chr10 35670001 35670060 -109919228 - L2 LINE L2 -86 3186 3128 321 288 8 68 chr10 35670215 35670333 -109918955 - L2 LINE L2 0 3313 3203 186 167 0 0 chr10 35670781 35670817 -109918471 + A-rich Low_complexity Low_complexity 2 37 0 2131 106 3 0 chr10 35671016 35671309 -109917979 + AluSp SINE Alu 2 295 -18 2247 167 83 2 chr10 35671985 35672171 -109917117 - MSTC LTR MaLR 0 428 258 2162 95 0 10 chr10 35672171 35672475 -109916813 - AluSc SINE Alu -8 301 1 2247 167 83 2 chr10 35672475 35672684 -109916604 - MSTC LTR MaLR -170 258 1 305 260 96 39 chr10 35672745 35672836 -109916452 + L2 LINE L2 3203 3302 -11 1956 118 28 0 chr10 35672836 35673124 -109916164 + AluSx SINE Alu 5 300 -12 305 260 96 39 chr10 35673124 35673136 -109916152 + L2 LINE L2 3302 3312 -1 265 285 51 51 chr10 35673242 35673379 -109915909 - MER5B DNA MER1_type 0 178 42 * 269 328 0 0 chr10 35673367 35673428 -109915860 + L2 LINE L2 3128 3188 -84 2194 107 0 7 chr10 35674048 35674357 -109914931 + AluSx SINE Alu 1 307 -5 235 227 0 30 chr10 35674602 35674668 -109914620 + GA-rich Low_complexity Low_complexity 4 67 0 25 0 0 0 chr10 35675337 35675362 -109913926 + AT_rich Low_complexity Low_complexity 1 25 0 2124 87 3 17 chr10 35676279 35676577 -109912711 + AluSq SINE Alu 1 294 -19 284 217 12 12 chr10 35676804 35676887 -109912401 - MLT1J1 LTR MaLR 0 446 364 2355 66 0 10 chr10 35676888 35677191 -109912097 + AluY SINE Alu 1 300 -11 1899 119 35 0 chr10 35677292 35677578 -109911710 - AluY SINE Alu -15 296 1 234 160 40 20 chr10 35677661 35677705 -109911583 - MLT1J2 LTR MaLR -283 167 123 982 251 103 13 chr10 35677705 35678139 -109911149 - MLT1G1 LTR MaLR -2 593 38 395 206 27 0 chr10 35678765 35678838 -109910450 - L2 LINE L2 0 3272 3198 21 36 0 0 chr10 35679911 35679939 -109909349 + AT_rich Low_complexity Low_complexity 1 28 0 2692 147 12 0 chr10 35680011 35680427 -109908861 + MSTB LTR MaLR 5 425 -1 2713 169 27 4 chr10 35680731 35681251 -109908037 + L1MB3 LINE L1 5652 6183 0 984 271 80 39 chr10 35681258 35681307 -109907981 + HAL1 LINE L1 1032 1078 -1429 2053 117 3 7 chr10 35681307 35681606 -109907682 + AluSx SINE Alu 7 304 -8 984 271 80 39 chr10 35681606 35682091 -109907197 + HAL1 LINE L1 1078 1588 -919 2050 97 7 7 chr10 35682104 35682392 -109906896 - AluSp SINE Alu -25 288 1 391 320 87 0 chr10 35682634 35682806 -109906482 - HAL1 LINE L1 -710 1797 1611 520 254 21 42 chr10 35683563 35683756 -109905532 - MER5A DNA MER1_type 0 189 1 288 304 29 0 chr10 35684045 35684114 -109905174 - L2 LINE L2 -5 3308 3238 839 163 0 0 chr10 35684138 35684267 -109905021 + FLAM_A SINE Alu 1 129 -4 895 205 96 38 chr10 35684463 35684702 -109904586 + LTR65 LTR ERV1 169 421 -248 516 315 31 44 chr10 35684871 35685192 -109904096 + MER90 LTR ERV1 294 610 -4 791 251 0 43 chr10 35685238 35685445 -109903843 + MER63A DNA MER1_type 13 210 0 649 303 34 8 chr10 35686654 35686892 -109902396 + LTR33A LTR ERVL 280 523 0 193 273 91 15 chr10 35687029 35687095 -109902193 - L2 LINE L2 -247 3025 2955 363 23 0 0 chr10 35688126 35688170 -109901118 + (TC)n Simple_repeat Simple_repeat 1 44 0 22 0 0 0 chr10 35690075 35690097 -109899191 + AT_rich Low_complexity Low_complexity 1 22 0 2680 58 12 85 chr10 35690527 35690825 -109898463 + L1PB1 LINE L1 5629 5954 -197 2464 40 0 13 chr10 35690825 35691129 -109898159 + AluY SINE Alu 1 300 -11 2680 58 12 85 chr10 35691129 35691314 -109897974 + L1PB1 LINE L1 5954 6151 0 756 279 36 27 chr10 35691443 35691704 -109897584 + MIR SINE MIR 1 258 -4 2220 102 0 10 chr10 35692754 35693059 -109896229 - AluSx SINE Alu -10 302 1 291 346 94 30 chr10 35693100 35693362 -109895926 - L2 LINE L2 -245 3068 2786 455 242 101 7 chr10 35693405 35693554 -109895734 - MLT1H1 LTR MaLR -1 554 392 2018 142 0 0 chr10 35693662 35693957 -109895331 - AluSx SINE Alu -17 295 1 232 326 61 20 chr10 35694124 35694222 -109895066 - L2 LINE L2 -517 2797 2696 799 172 0 0 chr10 35694325 35694447 -109894841 - FLAM_A SINE Alu -10 123 2 182 293 121 0 chr10 35694982 35695040 -109894248 - MIR SINE MIR -150 112 48 1365 165 115 4 chr10 35695040 35695301 -109893987 - AluJo SINE Alu -16 296 7 192 161 0 0 chr10 35695303 35695334 -109893954 - MIR SINE MIR -147 61 31 2202 106 0 0 chr10 35695339 35695641 -109893647 - AluSx SINE Alu -10 302 1 192 305 107 30 chr10 35695667 35695798 -109893490 - MIR SINE MIR -26 236 96 264 185 0 0 chr10 35696024 35696078 -109893210 + GA-rich Low_complexity Low_complexity 2 55 0 1793 184 0 0 chr10 35697476 35697786 -109891502 - AluJo SINE Alu -2 310 1 440 209 0 0 chr10 35697786 35697872 -109891416 - AluJb SINE Alu -171 141 56 2184 103 0 3 chr10 35699147 35699438 -109889850 - AluSg SINE Alu -20 290 1 1615 178 3 26 chr10 35699480 35699783 -109889505 - AluJo SINE Alu -16 296 1 1991 267 66 55 chr10 35699783 35700828 -109888460 - HAL1b LINE L1 -219 1129 73 2251 86 0 57 chr10 35700926 35701241 -109888047 - AluSq SINE Alu -16 297 1 676 268 129 55 chr10 35701728 35702131 -109887157 - MLT1J LTR MaLR -17 494 62 227 235 0 92 chr10 35702153 35702251 -109887037 - L1MC4 LINE L1 -1340 6702 6614 260 300 0 0 chr10 35702275 35702365 -109886923 - L1MC4 LINE L1 -1339 6703 6614 213 121 0 0 chr10 35702365 35702398 -109886890 + (TA)n Simple_repeat Simple_repeat 1 33 0 843 176 12 35 chr10 35702399 35702569 -109886719 - FRAM SINE Alu 0 166 1 197 159 143 48 chr10 35702685 35702748 -109886540 + L2 LINE L2 3034 3102 -170 1423 161 98 42 chr10 35703191 35703477 -109885811 - AluSx SINE Alu -8 304 3 21 0 0 0 chr10 35703664 35703685 -109885603 + AT_rich Low_complexity Low_complexity 1 21 0 2857 3 0 0 chr10 35704128 35704432 -109884856 - AluYa5 SINE Alu -7 304 1 216 0 0 0 chr10 35704449 35704473 -109884815 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1143 211 13 9 chr10 35704576 35704808 -109884480 - AluJo SINE Alu -3 309 77 508 333 0 29 chr10 35704820 35705024 -109884264 - L2 LINE L2 -8 3305 3108 876 150 0 15 chr10 35705632 35705765 -109883523 + FLAM_C SINE Alu 1 131 -2 469 233 78 70 chr10 35705830 35706118 -109883170 + MLT1J2 LTR MaLR 123 449 -1 295 288 34 68 chr10 35706207 35706325 -109882963 + MIR SINE MIR 2 115 -147 22 0 0 0 chr10 35706681 35706703 -109882585 + AT_rich Low_complexity Low_complexity 1 22 0 396 186 21 41 chr10 35707909 35708006 -109881282 - MER5A DNA MER1_type -86 103 9 286 254 0 127 chr10 35708091 35708201 -109881087 + MIR SINE MIR 88 183 -79 29 47 0 0 chr10 35710168 35710211 -109879077 + AT_rich Low_complexity Low_complexity 1 43 0 208 111 67 0 chr10 35711266 35711311 -109877977 + GA-rich Low_complexity Low_complexity 2 49 0 407 264 50 14 chr10 35714013 35714094 -109875194 + MIR SINE MIR 117 207 -55 1779 164 20 3 chr10 35714094 35714392 -109874896 + AluJb SINE Alu 1 303 -9 407 264 50 14 chr10 35714392 35714450 -109874838 + MIR SINE MIR 207 261 -1 264 59 0 0 chr10 35715105 35715139 -109874149 + (CA)n Simple_repeat Simple_repeat 2 35 0 1349 176 83 47 chr10 35715325 35715626 -109873662 + AluJo SINE Alu 1 312 0 472 193 9 55 chr10 35715902 35716011 -109873277 + L2 LINE L2 3210 3313 0 2143 122 0 13 chr10 35716288 35716592 -109872696 - AluSx SINE Alu -12 300 1 25 31 0 0 chr10 35717041 35717073 -109872215 + AT_rich Low_complexity Low_complexity 1 32 0 189 0 0 0 chr10 35719134 35719155 -109870133 + (TTTA)n Simple_repeat Simple_repeat 3 23 0 1610 157 0 53 chr10 35719168 35719449 -109869839 - AluJo SINE Alu -46 266 1 290 314 67 0 chr10 35720657 35720762 -109868526 + L2 LINE L2 3143 3254 -18 1640 111 13 114 chr10 35720871 35721187 -109868101 + AluJb SINE Alu 1 284 -28 243 0 0 0 chr10 35721187 35721214 -109868074 + (TA)n Simple_repeat Simple_repeat 1 27 0 193 268 0 0 chr10 35721226 35721267 -109868021 + L2 LINE L2 2717 2757 -557 226 315 63 27 chr10 35721771 35721882 -109867406 + L2 LINE L2 3153 3267 -5 321 118 0 0 chr10 35723041 35723092 -109866196 + (TG)n Simple_repeat Simple_repeat 2 52 0 1509 186 19 38 chr10 35723117 35723434 -109865854 - AluJo SINE Alu -1 311 1 354 232 90 32 chr10 35723782 35723937 -109865351 + L1MC5 LINE L1 7746 7909 -52 2129 135 0 3 chr10 35723973 35724277 -109865011 + AluSg SINE Alu 1 303 -7 276 281 11 11 chr10 35727096 35727185 -109862103 + GA-rich Low_complexity Low_complexity 4 92 0 25 0 0 0 chr10 35730199 35730224 -109859064 + AT_rich Low_complexity Low_complexity 1 25 0 969 118 34 56 chr10 35730224 35730402 -109858886 - L1MA8 LINE L1 -3 6288 6115 2420 95 0 19 chr10 35730402 35730718 -109858570 - AluSx SINE Alu -2 310 1 324 284 10 118 chr10 35731347 35731486 -109857802 + MER5A DNA MER1_type 8 120 -69 1585 154 6 77 chr10 35731486 35731644 -109857644 - AluJo SINE Alu -23 289 162 207 0 0 0 chr10 35731644 35731667 -109857621 + (TA)n Simple_repeat Simple_repeat 1 23 0 1585 154 6 77 chr10 35731667 35731819 -109857469 - AluJo SINE Alu -150 162 1 324 284 10 118 chr10 35731819 35731883 -109857405 + MER5A DNA MER1_type 120 189 0 2605 7 0 0 chr10 35735999 35736278 -109853010 - AluYb8 SINE Alu -1 317 39 2393 104 0 0 chr10 35737000 35737308 -109851980 - AluSq SINE Alu -5 308 1 205 257 83 73 chr10 35737359 35737468 -109851820 + L2 LINE L2 3162 3271 -1 3608 119 50 103 chr10 35737659 35738387 -109850901 - LTR8 LTR ERV1 -2 689 1 788 190 87 20 chr10 35739386 35739581 -109849707 + L1MB5 LINE L1 5959 6166 -8 1755 160 3 3 chr10 35740214 35740502 -109848786 - AluJb SINE Alu -24 288 1 829 168 0 0 chr10 35740503 35740628 -109848660 - AluJb SINE Alu -186 126 2 324 225 22 0 chr10 35740935 35741024 -109848264 - MIR SINE MIR -3 259 169 2311 121 0 0 chr10 35741176 35741483 -109847805 - AluSx SINE Alu -5 307 1 586 258 53 7 chr10 35741551 35741702 -109847586 - MIR SINE MIR -91 171 14 2068 125 0 0 chr10 35741751 35742040 -109847248 - AluSx SINE Alu -10 302 14 221 299 78 26 chr10 35742048 35742125 -109847163 - MIR3 SINE MIR -52 156 76 2631 144 57 2 chr10 35744516 35744953 -109844335 + L1MB2 LINE L1 5706 6166 -5 2058 129 3 3 chr10 35744953 35745247 -109844041 - AluSx SINE Alu -18 294 1 229 266 101 13 chr10 35746444 35746523 -109842765 - L2 LINE L2 -204 3068 2983 1353 139 12 141 chr10 35746942 35747319 -109841969 + L1MB3 LINE L1 5857 6183 0 188 261 43 0 chr10 35748041 35748087 -109841201 + L2 LINE L2 2713 2760 -554 2464 58 10 0 chr10 35748402 35748710 -109840578 - AluY SINE Alu 0 311 1 1693 164 41 7 chr10 35748726 35749018 -109840270 - AluJo SINE Alu -10 302 1 252 311 57 8 chr10 35749065 35749187 -109840101 + L2 LINE L2 3185 3312 -1 1013 144 16 57 chr10 35749850 35750044 -109839244 + MER53 DNA DNA 3 188 -1 2403 92 0 22 chr10 35750604 35750921 -109838367 - AluY SINE Alu -1 310 1 275 345 115 0 chr10 35751135 35751248 -109838040 - L2 LINE L2 -1 3271 3146 215 309 152 31 chr10 35751444 35751635 -109837653 - MIR SINE MIR -12 250 37 2252 108 0 16 chr10 35752890 35753206 -109836082 + AluSx SINE Alu 1 311 -1 1460 179 79 10 chr10 35753225 35753516 -109835772 + AluJo SINE Alu 1 311 -1 355 282 114 23 chr10 35753527 35753658 -109835630 - L2 LINE L2 -2 3311 3169 * 512 285 41 27 chr10 35753654 35753875 -109835413 - MIR SINE MIR -21 241 18 1808 120 0 15 chr10 35754775 35755075 -109834213 - AluSx SINE Alu 0 322 27 1755 163 0 24 chr10 35755615 35755904 -109833384 + AluJo SINE Alu 1 282 -30 1946 123 18 3 chr10 35756830 35757114 -109832174 - L1PA11 LINE L1 0 6174 5887 2781 118 106 34 chr10 35758756 35759335 -109829953 + MER4B LTR ERV1 1 779 0 390 300 0 0 chr10 35760112 35760202 -109829086 + MIR3 SINE MIR 111 200 -8 21 82 0 0 chr10 35760331 35760380 -109828908 + AT_rich Low_complexity Low_complexity 1 49 0 879 152 0 26 chr10 35760501 35760693 -109828595 + AluSg/x SINE Alu 134 321 0 25 83 0 0 chr10 35761100 35761160 -109828128 + AT_rich Low_complexity Low_complexity 1 60 0 794 185 32 37 chr10 35761315 35761504 -109827784 + MER53 DNA DNA 2 189 0 1425 201 60 104 chr10 35762591 35762874 -109826414 + MER34 LTR ERV1 1 248 -294 384 22 0 0 chr10 35762874 35762919 -109826369 + (TG)n Simple_repeat Simple_repeat 2 46 0 1425 201 60 104 chr10 35762919 35763202 -109826086 + MER34 LTR ERV1 248 542 0 2249 108 3 16 chr10 35764909 35765224 -109824064 - AluSx SINE Alu -1 311 1 430 316 82 37 chr10 35766402 35766646 -109822642 - MIR SINE MIR -2 260 6 183 354 0 0 chr10 35769107 35769155 -109820133 - L2 LINE L2 -15 3257 3210 * 209 304 183 35 chr10 35769126 35769241 -109820047 - MIR SINE MIR -28 234 103 300 111 0 0 chr10 35769749 35769794 -109819494 + (CA)n Simple_repeat Simple_repeat 2 46 0 1622 149 100 0 chr10 35769847 35770128 -109819160 - AluSx SINE Alu -3 309 1 180 158 0 0 chr10 35770209 35770247 -109819041 + (CA)n Simple_repeat Simple_repeat 2 39 0 262 360 81 12 chr10 35770913 35771074 -109818214 + MIR SINE MIR 8 179 -83 285 29 0 0 chr10 35771182 35771216 -109818072 + (TG)n Simple_repeat Simple_repeat 1 34 0 2086 124 10 0 chr10 35771285 35771576 -109817712 + AluJb SINE Alu 1 294 -18 248 222 0 0 chr10 35771615 35771660 -109817628 + L2 LINE L2 3220 3264 -8 192 40 0 0 chr10 35772466 35772491 -109816797 + (CA)n Simple_repeat Simple_repeat 1 25 0 189 0 0 0 chr10 35773919 35773940 -109815348 + (TGG)n Simple_repeat Simple_repeat 3 23 0 216 333 0 13 chr10 35775656 35775734 -109813554 - L3 LINE CR1 -1 1576 1500 227 186 23 0 chr10 35776159 35776202 -109813086 + GA-rich Low_complexity Low_complexity 4 47 0 288 0 0 0 chr10 35776210 35776242 -109813046 + (TG)n Simple_repeat Simple_repeat 1 32 0 789 263 9 31 chr10 35777509 35777733 -109811555 + MER20 DNA MER1_type 1 219 0 356 308 133 14 chr10 35777907 35778050 -109811238 + MIR3 SINE MIR 28 187 -21 243 0 0 0 chr10 35778860 35778887 -109810401 + (CA)n Simple_repeat Simple_repeat 2 28 0 293 268 73 49 chr10 35780157 35780280 -109809008 + MIR SINE MIR 87 212 -50 2246 99 0 7 chr10 35780282 35780575 -109808713 + AluSx SINE Alu 1 291 -21 216 0 0 0 chr10 35781361 35781385 -109807903 + (T)n Simple_repeat Simple_repeat 1 24 0 418 279 117 11 chr10 35782904 35783083 -109806205 + MIR SINE MIR 34 231 -31 598 279 77 31 chr10 35783136 35783294 -109805994 + MLT1I LTR MaLR 37 186 -223 1983 116 54 85 chr10 35783294 35783681 -109805607 + THE1C LTR MaLR 1 375 0 598 279 77 31 chr10 35783681 35783809 -109805479 + MLT1I LTR MaLR 186 336 -73 3929 146 101 17 chr10 35784161 35784885 -109804403 + LTR1 LTR ERV1 1 785 0 28 48 0 0 chr10 35786824 35786866 -109802422 + AT_rich Low_complexity Low_complexity 1 42 0 1658 192 13 0 chr10 35787719 35788027 -109801261 - AluJo SINE Alu 0 312 1 2038 110 45 3 chr10 35789631 35789921 -109799367 + AluSx SINE Alu 1 302 -10 1708 167 0 32 chr10 35792129 35792440 -109796848 - AluJo SINE Alu -11 301 1 234 0 0 0 chr10 35793262 35793288 -109796000 + (A)n Simple_repeat Simple_repeat 1 26 0 2057 136 3 3 chr10 35794010 35794312 -109794976 - AluSx SINE Alu -10 302 1 785 215 32 148 chr10 35794603 35794697 -109794591 + L2 LINE L2 2960 3063 -250 2356 99 0 0 chr10 35794697 35794999 -109794289 + AluSq SINE Alu 1 302 -11 785 215 32 148 chr10 35794999 35795304 -109793984 + L2 LINE L2 3063 3313 0 299 255 47 19 chr10 35795482 35795588 -109793700 + MIR3 SINE MIR 98 206 -2 398 302 104 16 chr10 35795601 35795783 -109793505 + MIR3 SINE MIR 8 205 -3 2108 88 0 31 chr10 35797099 35797432 -109791856 + AluSx SINE Alu 1 324 0 414 297 32 60 chr10 35798588 35798773 -109790515 + MIR3 SINE MIR 24 203 -5 2869 100 12 21 chr10 35798913 35799108 -109790180 + MSTA LTR MaLR 1 196 -232 1881 62 0 0 chr10 35799108 35799334 -109789954 + AluY SINE Alu 82 307 -4 2869 100 12 21 chr10 35799334 35799559 -109789729 + MSTA LTR MaLR 196 417 -11 911 156 24 30 chr10 35801149 35801316 -109787972 - AluJo SINE Alu -26 286 121 3736 143 8 4 chr10 35801420 35801943 -109787345 + MER1A DNA MER1_type 3 527 0 2210 121 0 0 chr10 35802171 35802469 -109786819 - AluSx SINE Alu -14 298 1 400 84 14 28 chr10 35804331 35804402 -109784886 + (GGA)n Simple_repeat Simple_repeat 3 72 0 706 186 192 55 chr10 35807103 35807143 -109782145 + L1ME4a LINE L1 5789 5822 -299 2095 108 0 26 chr10 35807143 35807448 -109781840 + AluY SINE Alu 15 311 0 1505 158 34 67 chr10 35807458 35807755 -109781533 + AluJo SINE Alu 1 287 -25 191 61 30 0 chr10 35807758 35807791 -109781497 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 706 186 192 55 chr10 35807791 35808026 -109781262 + L1ME4a LINE L1 5830 6119 -2 200 255 0 20 chr10 35808314 35808365 -109780923 - MIR SINE MIR -57 205 156 1363 137 4 57 chr10 35808727 35808975 -109780313 + AluJo SINE Alu 76 310 -2 222 118 0 0 chr10 35809694 35809728 -109779560 + (TTCA)n Simple_repeat Simple_repeat 4 37 0 2516 213 93 5 chr10 35810995 35811563 -109777725 - MLT1E3 LTR MaLR -5 619 2 1860 144 42 0 chr10 35812543 35812827 -109776461 + AluJb SINE Alu 4 299 -13 223 163 0 0 chr10 35814726 35814769 -109774519 + CT-rich Low_complexity Low_complexity 2 44 0 258 343 64 64 chr10 35815740 35816023 -109773265 + L2 LINE L2 2828 3110 -162 192 229 181 24 chr10 35816128 35816211 -109773077 + L2 LINE L2 3214 3309 -4 1464 193 36 11 chr10 35817347 35817627 -109771661 + AluJo SINE Alu 2 288 -24 512 211 6 25 chr10 35817629 35817790 -109771498 + GA-rich Low_complexity Low_complexity 3 160 0 300 309 87 7 chr10 35818008 35818157 -109771131 + MIR3 SINE MIR 48 208 0 553 118 24 0 chr10 35818214 35818299 -109770989 - L1MA3 LINE L1 -1 6304 6218 27 0 0 0 chr10 35819547 35819574 -109769714 + AT_rich Low_complexity Low_complexity 1 27 0 429 197 0 134 chr10 35820109 35820251 -109769037 - L2 LINE L2 0 3313 3191 2399 96 0 0 chr10 35821174 35821476 -109767812 + AluSx SINE Alu 1 302 -10 2561 37 0 7 chr10 35821476 35821774 -109767514 + AluY SINE Alu 1 296 -15 266 310 152 0 chr10 35822436 35822607 -109766681 + MER117 DNA MER1_type 1 197 0 33 43 0 0 chr10 35822635 35822682 -109766606 + AT_rich Low_complexity Low_complexity 1 47 0 21 0 0 0 chr10 35822852 35822873 -109766415 + AT_rich Low_complexity Low_complexity 1 21 0 2083 128 0 7 chr10 35822936 35823232 -109766056 + AluSx SINE Alu 1 294 -18 242 56 28 0 chr10 35823315 35823351 -109765937 + (TA)n Simple_repeat Simple_repeat 1 37 0 3815 138 14 4 chr10 35823352 35823912 -109765376 - L1PA15 LINE L1 -13 6152 5587 525 269 26 52 chr10 35823965 35824158 -109765130 - L1ME LINE L1 -371 5750 5563 1230 225 9 0 chr10 35824263 35824485 -109764803 - MER58A DNA MER1_type 0 224 1 279 0 0 0 chr10 35825338 35825369 -109763919 + (CA)n Simple_repeat Simple_repeat 1 31 0 2340 94 7 0 chr10 35825660 35825959 -109763329 + AluSg SINE Alu 1 301 -9 181 317 37 73 chr10 35826087 35826169 -109763119 - MIR3 SINE MIR -52 156 78 273 261 0 15 chr10 35826325 35826390 -109762898 + L3 LINE CR1 1283 1346 -231 241 312 13 13 chr10 35826877 35826954 -109762334 + L3 LINE CR1 1414 1490 -87 219 358 41 41 chr10 35827817 35827940 -109761348 - L2 LINE L2 -27 3245 3123 189 175 0 0 chr10 35829687 35829727 -109759561 + CT-rich Low_complexity Low_complexity 2 41 0 1849 101 186 80 chr10 35830711 35831076 -109758212 - MER4A LTR ERV1 0 664 261 622 91 10 20 chr10 35831076 35831175 -109758113 - MER4A LTR ERV1 -566 98 1 1796 148 0 24 chr10 35831926 35832224 -109757064 - AluJo SINE Alu -17 295 5 490 276 112 30 chr10 35832547 35832779 -109756509 + MIR SINE MIR 7 257 -5 339 316 101 0 chr10 35832940 35833079 -109756209 - MIR SINE MIR -74 188 36 2278 112 0 3 chr10 35834017 35834321 -109754967 - AluSx SINE Alu -9 303 1 1771 132 0 0 chr10 35834735 35834978 -109754310 - AluSx SINE Alu -69 243 1 1811 170 3 3 chr10 35836005 35836299 -109752989 - AluJo SINE Alu -18 294 1 449 195 23 0 chr10 35836872 35836959 -109752329 - MIR3 SINE MIR -31 177 89 2313 83 7 3 chr10 35837089 35837389 -109751899 - AluSp SINE Alu -12 301 1 291 383 0 21 chr10 35838101 35838242 -109751046 + MIR3 SINE MIR 41 178 -30 196 308 17 108 chr10 35838646 35838726 -109750562 + L3b LINE CR1 1374 1441 -142 2235 99 7 0 chr10 35838726 35839010 -109750278 - AluSx SINE Alu -17 295 10 196 308 17 108 chr10 35839010 35839049 -109750239 + L3b LINE CR1 1441 1482 -101 278 262 43 116 chr10 35839482 35839529 -109749759 + MIR3 SINE MIR 34 83 -125 1802 176 26 0 chr10 35839529 35839831 -109749457 + AluJb SINE Alu 1 310 -2 278 262 43 116 chr10 35839831 35839947 -109749341 + MIR3 SINE MIR 83 185 -23 23 0 0 0 chr10 35841353 35841376 -109747912 + AT_rich Low_complexity Low_complexity 1 23 0 2018 156 6 3 chr10 35843123 35843438 -109745850 + 7SLRNA srpRNA srpRNA 1 316 -4 21 0 0 0 chr10 35844693 35844714 -109744574 + AT_rich Low_complexity Low_complexity 1 21 0 1741 122 37 24 chr10 35845840 35846168 -109743120 - AluSx SINE Alu 0 312 1 192 356 44 0 chr10 35846314 35846404 -109742884 + MIR SINE MIR 50 143 -65 396 226 83 15 chr10 35846891 35847024 -109742264 + MER103 DNA DNA 8 149 -17 2116 132 0 3 chr10 35848684 35848979 -109740309 + AluSg SINE Alu 4 297 -13 363 277 68 27 chr10 35849949 35850097 -109739191 - MIR SINE MIR -50 212 59 2375 96 3 0 chr10 35850375 35850678 -109738610 + AluSx SINE Alu 1 304 -8 266 159 14 43 chr10 35850732 35850801 -109738487 + L1ME LINE L1 5184 5250 -896 587 213 99 50 chr10 35850863 35851084 -109738204 + L1ME LINE L1 5261 5492 -670 21 0 0 0 chr10 35851452 35851473 -109737815 + AT_rich Low_complexity Low_complexity 1 21 0 973 106 0 0 chr10 35851530 35851662 -109737626 + AluSc SINE Alu 165 296 -13 2088 121 7 3 chr10 35852320 35852617 -109736671 - AluSg SINE Alu -12 298 1 1575 175 9 47 chr10 35853695 35854015 -109735273 - AluJo SINE Alu -4 308 1 663 164 18 18 chr10 35854422 35854532 -109734756 + FLAM_C SINE Alu 2 111 -32 25 51 0 0 chr10 35854546 35854585 -109734703 + AT_rich Low_complexity Low_complexity 1 39 0 1949 94 38 17 chr10 35855977 35856265 -109733023 - AluSq SINE Alu -19 294 1 257 233 0 0 chr10 35856275 35856335 -109732953 - L1ME3A LINE L1 -201 5969 5910 * 541 289 75 16 chr10 35856334 35856521 -109732767 + L1ME3A LINE L1 5963 6160 -10 535 154 100 9 chr10 35856641 35856751 -109732537 - MER96B DNA MER1_type? -23 394 275 461 181 123 26 chr10 35856642 35856797 -109732491 + MER96B DNA MER1_type? 25 194 -223 * 27 62 0 0 chr10 35858262 35858310 -109730978 + AT_rich Low_complexity Low_complexity 1 48 0 1041 233 0 23 chr10 35859950 35860165 -109729123 - MER63A DNA MER1_type 0 210 1 189 107 0 0 chr10 35861730 35861758 -109727530 + (A)n Simple_repeat Simple_repeat 1 28 0 198 0 0 0 chr10 35864213 35864235 -109725053 + (TG)n Simple_repeat Simple_repeat 2 23 0 225 0 0 0 chr10 35866004 35866029 -109723259 + (A)n Simple_repeat Simple_repeat 1 25 0 306 314 44 74 chr10 35866498 35866727 -109722561 + L1M2 LINE L1 1030 1251 -5598 32 26 0 0 chr10 35870175 35870214 -109719074 + AT_rich Low_complexity Low_complexity 1 39 0 1425 338 95 38 chr10 35870289 35871586 -109717702 - L2 LINE L2 -618 2696 1326 496 293 93 18 chr10 35873502 35873727 -109715561 - MLT1K LTR MaLR -15 573 332 2526 171 20 34 chr10 35874090 35874530 -109714758 - Tigger2a DNA MER2_type 0 434 1 209 157 0 39 chr10 35874544 35874595 -109714693 + T-rich Low_complexity Low_complexity 2 50 0 2084 128 3 3 chr10 35874717 35875014 -109714274 - AluSx SINE Alu -15 297 1 21 0 0 0 chr10 35875638 35875659 -109713629 + AT_rich Low_complexity Low_complexity 1 21 0 239 322 99 47 chr10 35875732 35875800 -109713488 + MIR3 SINE MIR 23 86 -122 4622 171 52 40 chr10 35875800 35876691 -109712597 + MER54A LTR ERVL 1 901 0 239 322 99 47 chr10 35876691 35876793 -109712495 + MIR3 SINE MIR 86 202 -6 1854 119 0 4 chr10 35879669 35879920 -109709368 + AluSc SINE Alu 46 295 -14 526 290 97 6 chr10 35881296 35881472 -109707816 + MIR SINE MIR 46 237 -25 207 322 67 0 chr10 35881684 35881774 -109707514 - L3 LINE CR1 -505 1072 977 203 327 0 0 chr10 35882049 35882101 -109707187 + (TG)n Simple_repeat Simple_repeat 2 53 0 388 348 50 50 chr10 35882255 35882514 -109706774 + L2 LINE L2 2990 3248 -24 298 351 40 0 chr10 35882629 35882777 -109706511 - MIR SINE MIR -6 256 103 23 0 0 0 chr10 35883360 35883383 -109705905 + AT_rich Low_complexity Low_complexity 1 23 0 726 291 36 8 chr10 35884326 35884577 -109704711 + MER46C DNA MER2_type 80 337 -1 2425 313 149 36 chr10 35884615 35885387 -109703901 + L2 LINE L2 839 1523 -1790 1565 188 20 14 chr10 35885387 35885680 -109703608 + AluJo SINE Alu 1 295 -17 2425 313 149 36 chr10 35885680 35886878 -109702410 + L2 LINE L2 1523 3039 -274 236 340 7 49 chr10 35886977 35887121 -109702167 + L2 LINE L2 2550 2687 -627 2261 103 3 0 chr10 35887165 35887467 -109701821 - AluSc SINE Alu -6 303 1 303 300 8 33 chr10 35887601 35887721 -109701567 + L2 LINE L2 2938 3054 -218 696 246 126 15 chr10 35887878 35888077 -109701211 + MIR SINE MIR 29 249 -13 2318 123 13 58 chr10 35888376 35888609 -109700679 + THE1B LTR MaLR 1 212 -152 1947 117 41 14 chr10 35888609 35888899 -109700389 - AluSx SINE Alu -13 299 2 2318 123 13 58 chr10 35888899 35889046 -109700242 + THE1B LTR MaLR 212 364 0 849 203 79 11 chr10 35889308 35889485 -109699803 + MER5A DNA MER1_type 1 189 0 212 59 29 0 chr10 35889702 35889736 -109699552 + (TTG)n Simple_repeat Simple_repeat 2 36 0 1231 191 0 9 chr10 35889744 35889964 -109699324 - AluJb SINE Alu -24 288 71 2768 86 31 17 chr10 35890810 35891169 -109698119 - THE1B LTR MaLR 0 364 1 201 324 54 9 chr10 35891437 35891548 -109697740 + L2 LINE L2 1552 1667 -1647 1204 207 93 77 chr10 35891586 35891852 -109697436 - MLT1B LTR MaLR -7 383 108 2018 136 7 0 chr10 35891852 35892147 -109697141 - AluSx SINE Alu -14 298 2 1204 207 93 77 chr10 35892147 35892257 -109697031 - MLT1B LTR MaLR -282 108 1 1129 219 22 48 chr10 35892332 35892647 -109696641 - MLT1A1 LTR MaLR 0 365 59 22 0 0 0 chr10 35893190 35893212 -109696076 + AT_rich Low_complexity Low_complexity 1 22 0 2771 127 39 10 chr10 35893232 35893648 -109695640 + MSTA LTR MaLR 1 428 0 191 114 29 0 chr10 35893851 35893886 -109695402 + GA-rich Low_complexity Low_complexity 5 40 0 21 36 0 0 chr10 35894025 35894053 -109695235 + AT_rich Low_complexity Low_complexity 1 28 0 189 74 0 0 chr10 35894594 35894621 -109694667 + (TC)n Simple_repeat Simple_repeat 2 28 0 225 333 14 0 chr10 35895556 35895625 -109693663 + MIR SINE MIR 83 152 -56 544 296 143 12 chr10 35895883 35896289 -109692999 - L1MC4a LINE L1 -1805 6003 5545 495 226 189 47 chr10 35896487 35896846 -109692442 + MLT1J1 LTR MaLR 18 427 -19 200 347 121 16 chr10 35896867 35897057 -109692231 + L2 LINE L2 2587 2796 -518 3675 115 46 3 chr10 35897207 35897774 -109691514 + LTR26 LTR ERV1 13 603 0 384 289 47 34 chr10 35897986 35898135 -109691153 - MIR3 SINE MIR -12 196 46 252 271 71 35 chr10 35899242 35899327 -109689961 - L2 LINE L2 -50 3263 3176 186 71 0 0 chr10 35899527 35899555 -109689733 + (GGCTG)n Simple_repeat Simple_repeat 3 30 0 1317 247 157 13 chr10 35899772 35900422 -109688866 - L2 LINE L2 -172 3141 2411 209 370 87 0 chr10 35900509 35900601 -109688687 - MIR3 SINE MIR -11 197 98 2201 91 0 0 chr10 35900621 35900895 -109688393 + AluY SINE Alu 23 296 -15 1253 197 30 0 chr10 35900901 35901135 -109688153 - MSTB LTR MaLR -2 424 184 1768 128 77 36 chr10 35901303 35901640 -109687648 - THE1C LTR MaLR 0 375 25 453 56 0 0 chr10 35901641 35901695 -109687593 - THE1C LTR MaLR -317 58 5 1511 187 124 38 chr10 35901742 35902138 -109687150 - MSTB1 LTR MaLR 0 432 3 241 239 70 14 chr10 35902714 35902785 -109686503 - MIR SINE MIR -1 261 187 250 341 11 11 chr10 35902843 35902931 -109686357 + MIR SINE MIR 60 147 -115 2062 141 3 3 chr10 35903149 35903454 -109685834 - AluSq SINE Alu -8 305 1 2497 127 82 20 chr10 35903674 35904077 -109685211 - MSTC LTR MaLR 0 428 1 2036 116 18 0 chr10 35904311 35904595 -109684693 - AluSg SINE Alu -9 301 13 1799 158 41 7 chr10 35905064 35905380 -109683908 + AluSx SINE Alu 1 312 0 28 29 0 0 chr10 35906491 35906526 -109682762 + AT_rich Low_complexity Low_complexity 1 35 0 24 0 0 0 chr10 35906843 35906867 -109682421 + AT_rich Low_complexity Low_complexity 1 24 0 1324 156 49 0 chr10 35906941 35907166 -109682122 - MER46A DNA MER2_type 0 236 1 193 328 69 0 chr10 35907436 35907494 -109681794 + MIR SINE MIR 50 111 -151 200 270 63 72 chr10 35908072 35908183 -109681105 + MIR SINE MIR 25 134 -128 217 276 26 40 chr10 35908661 35908737 -109680551 - MIR3 SINE MIR -51 157 83 1563 159 51 24 chr10 35909117 35909412 -109679876 - AluJo SINE Alu -9 303 1 1878 111 0 4 chr10 35910049 35910310 -109678978 - AluSx SINE Alu 0 312 53 436 254 81 41 chr10 35910319 35910516 -109678772 - MIR SINE MIR -12 250 46 21 57 0 0 chr10 35910646 35910681 -109678607 + AT_rich Low_complexity Low_complexity 1 35 0 328 307 79 7 chr10 35911030 35911170 -109678118 - L2 LINE L2 -4 3309 3160 2303 141 39 36 chr10 35915580 35915943 -109673345 - THE1B LTR MaLR 0 364 1 323 376 7 7 chr10 35916366 35916515 -109672773 + MIR3 SINE MIR 57 205 -3 195 174 22 43 chr10 35916660 35916706 -109672582 - L2 LINE L2 -23 3249 3205 208 279 302 0 chr10 35917612 35917741 -109671547 + MIR3 SINE MIR 36 203 -5 2364 92 0 6 chr10 35917786 35918101 -109671187 - AluSq SINE Alu 0 313 1 2524 80 0 0 chr10 35918710 35919050 -109670238 - AluY SINE Alu 0 340 1 1616 180 14 11 chr10 35919087 35919371 -109669917 - AluJo SINE Alu -27 285 1 1418 140 162 18 chr10 35920994 35921266 -109668022 + AluJo SINE Alu 1 311 -1 364 278 71 113 chr10 35923949 35924374 -109664914 - L2 LINE L2 -7 3265 2859 1702 257 93 27 chr10 35924468 35925298 -109663990 - MER45C DNA AcHobo -13 940 2 354 322 31 35 chr10 35926060 35926212 -109663076 + MIR SINE MIR 2 150 -58 904 150 60 0 chr10 35926233 35926366 -109662922 - AluJo SINE Alu -161 151 11 1750 113 8 0 chr10 35926385 35926625 -109662663 - AluSc SINE Alu -4 305 64 874 286 136 13 chr10 35926638 35927029 -109662259 + MLT1J LTR MaLR 71 509 -2 202 260 273 0 chr10 35927370 35927447 -109661841 - L2 LINE L2 -16 3297 3200 897 267 51 0 chr10 35927466 35927702 -109661586 + MIR SINE MIR 11 258 -4 1580 252 104 9 chr10 35927702 35928163 -109661125 - MLT1H LTR MaLR 0 549 45 289 225 17 146 chr10 35928343 35928521 -109660767 - MLT1H-int LTR MaLR -206 1529 1375 378 191 67 48 chr10 35929199 35929304 -109659984 - MLT1H-int LTR MaLR -832 539 433 1428 200 70 0 chr10 35929396 35929696 -109659592 - L1MB7 LINE L1 0 6184 5864 225 289 22 22 chr10 35929818 35929908 -109659380 - MLT1H-int LTR MaLR -1645 90 1 1049 250 77 45 chr10 35929958 35930334 -109658954 - MLT1H LTR MaLR -38 511 124 207 186 0 0 chr10 35930337 35930380 -109658908 + (CA)n Simple_repeat Simple_repeat 2 44 0 1004 224 16 44 chr10 35930381 35930635 -109658653 - MLT2B1 LTR ERVL -56 464 177 730 186 83 0 chr10 35930673 35930818 -109658470 - L1MD2 LINE L1 -10 6349 6193 197 125 0 21 chr10 35930821 35930869 -109658419 + (TA)n Simple_repeat Simple_repeat 1 47 0 221 233 34 27 chr10 35930899 35931045 -109658243 + (TA)n Simple_repeat Simple_repeat 1 147 0 242 56 28 0 chr10 35931046 35931082 -109658206 + (GA)n Simple_repeat Simple_repeat 2 38 0 1653 152 16 4 chr10 35931082 35931339 -109657949 - AluJb SINE Alu -30 282 23 4078 208 32 14 chr10 35931353 35932230 -109657058 - L1MD2 LINE L1 -162 6197 5305 1927 143 11 0 chr10 35933086 35933372 -109655916 - AluSx SINE Alu -23 289 1 23 68 0 0 chr10 35933375 35933419 -109655869 + AT_rich Low_complexity Low_complexity 1 44 0 236 314 161 8 chr10 35934060 35934178 -109655110 - L2 LINE L2 -5 3308 3173 216 0 0 0 chr10 35934696 35934720 -109654568 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 1368 165 136 4 chr10 35934743 35934985 -109654303 - AluJo SINE Alu -38 274 1 270 56 0 0 chr10 35934996 35935032 -109654256 + (TG)n Simple_repeat Simple_repeat 2 37 0 180 0 0 0 chr10 35935033 35935053 -109654235 + (TA)n Simple_repeat Simple_repeat 2 21 0 443 329 40 22 chr10 35935345 35935570 -109653718 + L3 LINE CR1 1146 1374 -203 202 226 57 0 chr10 35935632 35935685 -109653603 - MIR SINE MIR -77 185 130 195 342 25 0 chr10 35935847 35935926 -109653362 + L3 LINE CR1 1467 1547 -30 2363 173 75 25 chr10 35935997 35936478 -109652810 - MLT1D LTR MaLR 0 505 1 2358 111 18 82 chr10 35938012 35938401 -109650887 + THE1B LTR MaLR 1 364 0 768 191 0 15 chr10 35938830 35938966 -109650322 - AluJo SINE Alu -177 135 2 304 300 0 46 chr10 35939760 35939890 -109649398 + L1MEc LINE L1 1228 1351 -5189 1258 196 92 0 chr10 35940045 35940295 -109648993 + AluJo SINE Alu 9 281 -31 865 18 18 0 chr10 35940298 35940409 -109648879 + (TCTA)n Simple_repeat Simple_repeat 4 116 0 263 264 58 0 chr10 35940414 35940501 -109648787 + L1MEc LINE L1 1483 1574 -4956 310 286 190 7 chr10 35940532 35940795 -109648493 + L1MEc LINE L1 1724 2055 -846 234 0 0 0 chr10 35940889 35940915 -109648373 + (T)n Simple_repeat Simple_repeat 1 26 0 23 33 0 0 chr10 35941059 35941089 -109648199 + AT_rich Low_complexity Low_complexity 1 30 0 482 263 78 44 chr10 35941293 35941613 -109647675 + L1MEc LINE L1 2571 2901 -3639 1719 189 0 7 chr10 35941648 35941950 -109647338 + AluJo SINE Alu 1 300 -12 3460 77 27 0 chr10 35942504 35942945 -109646343 - L1PA10 LINE L1 -11 6157 5705 2029 106 0 0 chr10 35942990 35943264 -109646024 + AluSq SINE Alu 39 312 -1 24 32 0 0 chr10 35944477 35944508 -109644780 + AT_rich Low_complexity Low_complexity 1 31 0 2542 87 0 0 chr10 35945309 35945621 -109643667 + AluSx SINE Alu 1 312 0 1724 162 4 0 chr10 35945938 35946204 -109643084 + AluJo SINE Alu 1 267 -45 5694 130 8 1 chr10 35946217 35947073 -109642215 + L1PA16 LINE L1 5296 6157 -9 726 69 46 0 chr10 35948210 35948341 -109640947 + (TGGA)n Simple_repeat Simple_repeat 1 137 0 2253 91 3 23 chr10 35950095 35950402 -109638886 + AluY SINE Alu 1 301 -10 1970 142 0 35 chr10 35951634 35951945 -109637343 + AluSx SINE Alu 1 300 -12 25 0 0 0 chr10 35953067 35953092 -109636196 + AT_rich Low_complexity Low_complexity 1 25 0 2017 221 71 44 chr10 35955316 35955882 -109633406 + MLT1G LTR MaLR 10 590 0 2375 96 0 0 chr10 35956552 35956854 -109632434 + AluSx SINE Alu 1 302 -10 196 28 83 0 chr10 35956931 35956967 -109632321 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 227 154 0 0 chr10 35959191 35959230 -109630058 + L2 LINE L2 3261 3299 -14 207 100 0 0 chr10 35959524 35959554 -109629734 + (CA)n Simple_repeat Simple_repeat 2 31 0 323 23 45 0 chr10 35961816 35961860 -109627428 - MADE1 DNA Mariner 0 80 35 364 278 71 113 chr10 35962409 35962834 -109626454 - L2 LINE L2 -7 3265 2859 1702 257 93 27 chr10 35962928 35963758 -109625530 - MER45C DNA AcHobo -13 940 2 354 322 31 35 chr10 35964520 35964672 -109624616 + MIR SINE MIR 2 150 -58 904 150 60 0 chr10 35964693 35964826 -109624462 - AluJo SINE Alu -161 151 11 1750 113 8 0 chr10 35964845 35965085 -109624203 - AluSc SINE Alu -4 305 64 874 286 136 13 chr10 35965098 35965489 -109623799 + MLT1J LTR MaLR 71 509 -2 202 260 273 0 chr10 35965830 35965907 -109623381 - L2 LINE L2 -16 3297 3200 897 267 51 0 chr10 35965926 35966162 -109623126 + MIR SINE MIR 11 258 -4 1580 252 104 9 chr10 35966162 35966623 -109622665 - MLT1H LTR MaLR 0 549 45 289 225 17 146 chr10 35966803 35966981 -109622307 - MLT1H-int LTR MaLR -206 1529 1375 378 191 67 48 chr10 35967659 35967764 -109621524 - MLT1H-int LTR MaLR -832 539 433 1428 200 70 0 chr10 35967856 35968156 -109621132 - L1MB7 LINE L1 0 6184 5864 225 289 22 22 chr10 35968278 35968368 -109620920 - MLT1H-int LTR MaLR -1645 90 1 1074 245 85 53 chr10 35968418 35968794 -109620494 - MLT1H LTR MaLR -38 511 124 207 186 0 0 chr10 35968797 35968840 -109620448 + (CA)n Simple_repeat Simple_repeat 2 44 0 1004 224 16 44 chr10 35968841 35969095 -109620193 - MLT2B1 LTR ERVL -56 464 177 730 186 83 0 chr10 35969133 35969278 -109620010 - L1MD2 LINE L1 -10 6349 6193 197 125 0 21 chr10 35969281 35969329 -109619959 + (TA)n Simple_repeat Simple_repeat 1 47 0 255 239 28 21 chr10 35969359 35969501 -109619787 + (TA)n Simple_repeat Simple_repeat 1 143 0 242 56 28 0 chr10 35969502 35969538 -109619750 + (GA)n Simple_repeat Simple_repeat 2 38 0 1653 152 16 4 chr10 35969538 35969795 -109619493 - AluJb SINE Alu -30 282 23 4038 214 31 10 chr10 35969809 35970684 -109618604 - L1MD2 LINE L1 -162 6197 5305 1953 140 11 0 chr10 35971540 35971826 -109617462 - AluSx SINE Alu -23 289 1 236 314 161 8 chr10 35972514 35972632 -109616656 - L2 LINE L2 -5 3308 3173 216 0 0 0 chr10 35973150 35973174 -109616114 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 1413 141 153 21 chr10 35973197 35973439 -109615849 - AluJo SINE Alu -38 274 1 263 203 16 0 chr10 35973439 35973503 -109615785 + (TA)n Simple_repeat Simple_repeat 2 66 0 443 329 40 22 chr10 35973794 35974019 -109615269 + L3 LINE CR1 1146 1374 -203 187 245 57 0 chr10 35974081 35974134 -109615154 - MIR SINE MIR -77 185 130 195 342 25 0 chr10 35974296 35974375 -109614913 + L3 LINE CR1 1467 1547 -30 2363 173 75 25 chr10 35974446 35974927 -109614361 - MLT1D LTR MaLR 0 505 1 2358 111 18 82 chr10 35976461 35976850 -109612438 + THE1B LTR MaLR 1 364 0 768 191 0 15 chr10 35977279 35977415 -109611873 - AluJo SINE Alu -177 135 2 316 292 0 46 chr10 35978209 35978339 -109610949 + L1MEc LINE L1 1228 1351 -5189 1258 196 92 0 chr10 35978494 35978744 -109610544 + AluJo SINE Alu 9 281 -31 649 23 23 0 chr10 35978747 35978834 -109610454 + (TCTA)n Simple_repeat Simple_repeat 4 92 0 263 264 58 0 chr10 35978839 35978926 -109610362 + L1MEc LINE L1 1483 1574 -4956 310 286 190 7 chr10 35978957 35979220 -109610068 + L1MEc LINE L1 1724 2055 -846 234 0 0 0 chr10 35979314 35979340 -109609948 + (T)n Simple_repeat Simple_repeat 1 26 0 23 33 0 0 chr10 35979484 35979514 -109609774 + AT_rich Low_complexity Low_complexity 1 30 0 444 269 78 44 chr10 35979718 35980038 -109609250 + L1MEc LINE L1 2571 2901 -3639 1750 185 0 7 chr10 35980073 35980375 -109608913 + AluJo SINE Alu 1 300 -12 3460 77 27 0 chr10 35980930 35981371 -109607917 - L1PA10 LINE L1 -11 6157 5705 1977 116 0 0 chr10 35981416 35981691 -109607597 + AluSq SINE Alu 39 313 0 23 33 0 0 chr10 35982900 35982930 -109606358 + AT_rich Low_complexity Low_complexity 1 30 0 2520 90 0 0 chr10 35983731 35984043 -109605245 + AluSx SINE Alu 1 312 0 1724 162 4 0 chr10 35984361 35984627 -109604661 + AluJo SINE Alu 1 267 -45 5694 130 8 1 chr10 35984640 35985496 -109603792 + L1PA16 LINE L1 5296 6157 -9 726 69 46 0 chr10 35986634 35986765 -109602523 + (TGGA)n Simple_repeat Simple_repeat 1 137 0 297 271 52 58 chr10 35988178 35988333 -109600955 + MER103 DNA DNA 4 157 -9 898 229 85 38 chr10 35988497 35988836 -109600452 + MLT1E LTR MaLR 305 593 0 264 358 91 12 chr10 35989672 35989837 -109599451 - L3b LINE CR1 -23 1560 1383 261 316 61 9 chr10 35989907 35990021 -109599267 - L3b LINE CR1 -362 1221 1102 1914 116 20 40 chr10 35990361 35990663 -109598625 + AluSc SINE Alu 1 296 -13 1141 155 120 43 chr10 35990732 35990990 -109598298 - AluJo SINE Alu -21 291 14 273 119 0 0 chr10 35991327 35991369 -109597919 + (TG)n Simple_repeat Simple_repeat 2 43 0 334 0 43 0 chr10 35991636 35991682 -109597606 + (TG)n Simple_repeat Simple_repeat 2 49 0 1711 289 119 40 chr10 35992630 35993669 -109595619 + L2 LINE L2 1734 2855 -459 251 269 0 15 chr10 35993774 35993841 -109595447 + MLT1I LTR MaLR 344 409 0 326 313 50 55 chr10 35993856 35994038 -109595250 - L2 LINE L2 0 3313 3133 696 237 178 39 chr10 35994736 35995146 -109594142 - L1ME3A LINE L1 -49 6121 5655 368 274 17 46 chr10 35995194 35995368 -109593920 - L1ME3A LINE L1 -676 5486 5318 278 308 30 56 chr10 35995397 35995595 -109593693 + HAL1 LINE L1 1482 1674 -833 468 294 102 29 chr10 35995837 35996326 -109592962 + L1M4 LINE L1 4426 4950 -1196 956 179 0 22 chr10 35996435 35996614 -109592674 - FRAM SINE Alu -8 168 1 1710 165 10 10 chr10 35996620 35997083 -109592205 - AluJo SINE Alu 0 312 1 364 339 46 0 chr10 35997088 35997218 -109592070 - L2 LINE L2 -541 2773 2638 903 253 99 92 chr10 35997235 35997736 -109591552 + HAL1b LINE L1 392 888 -460 2226 107 0 7 chr10 35997736 35998044 -109591244 + AluSc SINE Alu 1 306 -3 903 253 99 92 chr10 35998044 35998063 -109591225 + HAL1b LINE L1 888 905 -443 2367 103 0 0 chr10 35998063 35998375 -109590913 + AluSq SINE Alu 1 312 -1 903 253 99 92 chr10 35998375 35998568 -109590720 + HAL1b LINE L1 905 1111 -237 234 233 44 56 chr10 35998596 35998686 -109590602 - L1MC4 LINE L1 -1340 6702 6614 260 247 39 0 chr10 35998883 35998960 -109590328 + MIR SINE MIR 175 254 -8 1398 213 68 55 chr10 35999322 35999707 -109589581 - MLT1B LTR MaLR 0 390 1 1775 145 7 36 chr10 35999774 36000077 -109589211 - AluJo SINE Alu -18 294 1 2089 146 0 0 chr10 36000083 36000384 -109588904 - AluSq SINE Alu -12 301 1 2064 124 0 7 chr10 36000883 36001174 -109588114 + AluSx SINE Alu 1 289 -23 21 57 0 0 chr10 36001733 36001768 -109587520 + AT_rich Low_complexity Low_complexity 1 35 0 259 216 27 0 chr10 36003099 36003173 -109586115 + (TA)n Simple_repeat Simple_repeat 1 76 0 34 79 0 0 chr10 36003230 36003306 -109585982 + AT_rich Low_complexity Low_complexity 1 76 0 389 310 56 21 chr10 36004648 36004790 -109584498 - MIR3 SINE MIR -61 147 1 2183 133 0 3 chr10 36004937 36005246 -109584042 + AluSx SINE Alu 1 308 -4 211 263 35 0 chr10 36005376 36005433 -109583855 + (CATATA)n Simple_repeat Simple_repeat 1 59 0 243 0 0 0 chr10 36006892 36006919 -109582369 + (T)n Simple_repeat Simple_repeat 1 27 0 225 162 44 0 chr10 36007702 36007770 -109581518 + (TA)n Simple_repeat Simple_repeat 1 71 0 952 199 256 59 chr10 36008652 36008709 -109580579 + L1MEc LINE L1 37 81 -6315 2014 189 25 17 chr10 36008709 36009069 -109580219 - MLT1A1 LTR MaLR 0 365 3 952 199 256 59 chr10 36009069 36009275 -109580013 + L1MEc LINE L1 81 245 -6151 285 29 0 0 chr10 36009275 36009309 -109579979 + (GA)n Simple_repeat Simple_repeat 1 34 0 952 199 256 59 chr10 36009309 36009435 -109579853 + L1MEc LINE L1 245 504 -5892 828 222 41 110 chr10 36009425 36009844 -109579444 + L1MEc LINE L1 2113 2502 -3894 * 765 237 12 0 chr10 36009844 36010017 -109579271 + L1MEc LINE L1 2764 2938 -3277 * 1497 235 48 83 chr10 36010011 36010610 -109578678 + L1MEc LINE L1 3524 4101 -2114 1214 339 121 36 chr10 36012513 36013017 -109576271 - L2 LINE L2 -72 3200 2740 1735 162 10 10 chr10 36013017 36013307 -109575981 + AluJo SINE Alu 1 290 -22 1214 339 121 36 chr10 36013307 36014175 -109575113 - L2 LINE L2 -532 2740 1720 470 162 5 49 chr10 36014924 36015109 -109574179 + (TG)n Simple_repeat Simple_repeat 2 178 0 260 210 25 49 chr10 36015111 36015192 -109574096 + (TATATG)n Simple_repeat Simple_repeat 3 81 0 557 135 13 46 chr10 36015192 36015433 -109573855 + (TG)n Simple_repeat Simple_repeat 1 232 0 584 175 33 109 chr10 36015988 36016171 -109573117 - L1M4 LINE L1 -3361 2785 2617 300 260 121 56 chr10 36016231 36016407 -109572881 - L1ME LINE L1 -294 5827 5631 1971 164 91 30 chr10 36016407 36016576 -109572712 + MSTD LTR MaLR 1 158 -238 1863 164 0 28 chr10 36016576 36016893 -109572395 + AluJo SINE Alu 1 308 -4 1971 164 91 30 chr10 36016893 36017096 -109572192 + MSTD LTR MaLR 158 396 0 300 260 121 56 chr10 36017096 36017150 -109572138 - L1ME LINE L1 -490 5631 5582 26 0 0 0 chr10 36018464 36018490 -109570798 + AT_rich Low_complexity Low_complexity 1 26 0 1637 180 31 10 chr10 36018994 36019283 -109570005 + AluJo SINE Alu 5 299 -13 544 235 67 0 chr10 36020718 36020867 -109568421 - MER103 DNA DNA -7 159 1 42 0 0 0 chr10 36021310 36021352 -109567936 + AT_rich Low_complexity Low_complexity 1 42 0 1761 130 20 4 chr10 36021356 36021610 -109567678 - AluSx SINE Alu -54 258 1 28 29 0 0 chr10 36021720 36021755 -109567533 + AT_rich Low_complexity Low_complexity 1 35 0 389 311 91 36 chr10 36021773 36021992 -109567296 - MIR SINE MIR -3 259 29 183 42 0 0 chr10 36022454 36022478 -109566810 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 323 277 0 24 chr10 36023113 36023196 -109566092 + MIR SINE MIR 18 98 -110 241 313 31 0 chr10 36024204 36024268 -109565020 + L2 LINE L2 3201 3266 -6 586 257 119 15 chr10 36025329 36025531 -109563757 - L2 LINE L2 0 3313 3091 2877 157 13 23 chr10 36025563 36026173 -109563115 + pTR5 LTR ERV1 742 1345 -1093 4103 132 22 136 chr10 36026188 36027116 -109562172 + LTR12 LTR ERV1 5 826 0 2198 96 3 3 chr10 36027292 36027585 -109561703 - AluY SINE Alu -18 293 1 412 310 67 28 chr10 36027738 36027914 -109561374 - L2 LINE L2 -448 2866 2675 2110 141 0 0 chr10 36027914 36028213 -109561075 + AluJo SINE Alu 1 299 -13 412 310 67 28 chr10 36028213 36028291 -109560997 - L2 LINE L2 -639 2675 2602 195 217 22 0 chr10 36029067 36029113 -109560175 - MIR SINE MIR -109 153 107 301 284 0 49 chr10 36029363 36029465 -109559823 + (CA)n Simple_repeat Simple_repeat 1 97 0 3278 128 63 9 chr10 36029515 36030054 -109559234 - L1MA2 LINE L1 0 6304 5737 321 328 55 8 chr10 36030144 36030272 -109559016 + L3b LINE CR1 1162 1295 -288 526 285 43 48 chr10 36031652 36031859 -109557429 - MIR SINE MIR -51 211 6 22 0 0 0 chr10 36032170 36032192 -109557096 + AT_rich Low_complexity Low_complexity 1 22 0 225 98 0 98 chr10 36032342 36032383 -109556905 - U2 snRNA snRNA -150 38 2 410 304 44 44 chr10 36033604 36033785 -109555503 - MIR SINE MIR -51 211 31 2539 39 7 13 chr10 36033790 36034099 -109555189 - AluY SINE Alu -4 307 1 756 175 133 0 chr10 36034101 36034244 -109555044 - FRAM SINE Alu -15 161 1 2515 57 0 0 chr10 36034256 36034553 -109554735 - AluY SINE Alu -14 297 1 519 56 127 0 chr10 36035391 36035462 -109553826 + MADE1 DNA Mariner 1 80 0 1890 136 44 0 chr10 36036945 36037218 -109552070 - AluSx SINE Alu -27 285 1 4552 119 116 132 chr10 36037461 36038745 -109550543 - pTR5 LTR ERV1 -143 2295 741 604 134 62 18 chr10 36038965 36039077 -109550211 + THE1C LTR MaLR 1 117 -258 1054 116 0 17 chr10 36039670 36039851 -109549437 + (TTTC)n Simple_repeat Simple_repeat 1 178 0 1662 184 0 4 chr10 36039856 36040133 -109549155 - AluJo SINE Alu -36 276 1 2271 121 3 0 chr10 36043598 36043904 -109545384 + AluSq SINE Alu 1 307 -6 252 314 58 76 chr10 36045052 36045224 -109544064 - L2 LINE L2 -179 3093 2925 283 274 48 12 chr10 36045331 36045415 -109543873 - L2 LINE L2 -45 3268 3182 2237 92 0 41 chr10 36045481 36045798 -109543490 + AluSg SINE Alu 1 304 -6 534 277 82 48 chr10 36045935 36046166 -109543122 - MIR SINE MIR -10 252 14 234 250 0 18 chr10 36046176 36046232 -109543056 + MER5B DNA MER1_type 72 126 -52 778 200 0 22 chr10 36046245 36046380 -109542908 - FLAM_C SINE Alu 0 133 2 264 127 0 0 chr10 36046387 36046442 -109542846 + (TTTAG)n Simple_repeat Simple_repeat 1 55 0 1926 157 0 0 chr10 36046442 36046728 -109542560 - AluJb SINE Alu -26 286 1 2567 61 0 10 chr10 36048553 36048866 -109540422 + AluY SINE Alu 1 310 -1 271 322 73 41 chr10 36049330 36049459 -109539829 + MIR SINE MIR 9 132 -130 2160 110 0 0 chr10 36049459 36049740 -109539548 + AluSx SINE Alu 23 303 -9 271 322 73 41 chr10 36049740 36049855 -109539433 + MIR SINE MIR 132 261 -1 2118 153 46 100 chr10 36053337 36053408 -109535880 - Tigger2a DNA MER2_type -2274 434 361 1771 171 3 10 chr10 36053408 36053706 -109535582 - AluSx SINE Alu -16 296 1 2118 153 46 100 chr10 36053706 36054093 -109535195 - Tigger2a DNA MER2_type -2347 361 1 264 341 0 0 chr10 36054348 36054436 -109534852 - MIR SINE MIR -2 260 173 * 271 303 8 42 chr10 36054435 36054554 -109534734 + MIR SINE MIR 23 137 -71 220 341 14 29 chr10 36054679 36054817 -109534471 - L3b LINE CR1 -346 1237 1102 1609 226 45 59 chr10 36059116 36059323 -109529965 + MLT1D LTR MaLR 1 209 -296 1298 171 140 8 chr10 36059323 36059580 -109529708 + AluSg1 SINE Alu 1 291 -18 1609 226 45 59 chr10 36059580 36059880 -109529408 + MLT1D LTR MaLR 209 501 -4 15356 137 16 7 chr10 36060751 36063142 -109526146 - Tigger1 DNA MER2_type -5 2413 1 2634 228 88 50 chr10 36063217 36064014 -109525274 - MER21B LTR ERV1 -36 827 1 599 239 77 43 chr10 36064612 36064846 -109524442 - MIR SINE MIR 0 262 21 2113 105 6 53 chr10 36065294 36065617 -109523671 - AluSx SINE Alu -4 308 1 222 228 18 18 chr10 36065655 36065712 -109523576 + CT-rich Low_complexity Low_complexity 4 60 0 1731 179 7 14 chr10 36066117 36066408 -109522880 + AluJb SINE Alu 1 289 -23 1753 121 0 16 chr10 36068228 36068485 -109520803 - AluSx SINE Alu -8 304 52 390 121 0 0 chr10 36068493 36068559 -109520729 + (T)n Simple_repeat Simple_repeat 1 66 0 43620 33 21 2 chr10 36068561 36074599 -109514689 - L1HS LINE L1 0 6155 2 298 313 17 43 chr10 36074972 36075087 -109514201 - MIR SINE MIR -142 120 9 2098 107 4 0 chr10 36075244 36075568 -109513720 - AluSx SINE Alu 0 325 1 258 258 91 0 chr10 36075843 36075909 -109513379 - MIR3 SINE MIR -51 157 86 1972 154 0 0 chr10 36076092 36076385 -109512903 + AluSx SINE Alu 1 293 -19 198 118 0 0 chr10 36076389 36076423 -109512865 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 550 339 49 5 chr10 36076475 36076699 -109512589 - L3 LINE CR1 -278 1299 1066 262 90 15 104 chr10 36077041 36077108 -109512180 + HSMAR1 DNA Mariner 1 61 -1226 * 347 111 16 63 chr10 36077104 36077167 -109512121 - MADE1 DNA Mariner -20 60 1 228 274 41 0 chr10 36077907 36077980 -109511308 - MIR3 SINE MIR -6 202 127 324 316 89 32 chr10 36078175 36078365 -109510923 + MIR3 SINE MIR 1 201 -7 1043 178 0 6 chr10 36078643 36078823 -109510465 - FRAM SINE Alu -3 173 1 2009 165 0 0 chr10 36080201 36080510 -109508778 + AluSx SINE Alu 1 309 -3 467 277 57 0 chr10 36080512 36080653 -109508635 - MIR SINE MIR -13 249 101 183 250 70 70 chr10 36080733 36080833 -109508455 + MIR3 SINE MIR 109 208 0 2095 109 3 0 chr10 36081605 36081889 -109507399 + AluSx SINE Alu 14 298 -14 1996 230 67 66 chr10 36083119 36083178 -109506110 + L1MC4 LINE L1 7343 7400 -642 2179 127 0 3 chr10 36083178 36083478 -109505810 + AluSx SINE Alu 1 299 -13 1996 230 67 66 chr10 36083478 36084117 -109505171 + L1MC4 LINE L1 7400 8042 0 1345 139 15 157 chr10 36084215 36084539 -109504749 + AluJo SINE Alu 16 293 -19 1752 228 94 41 chr10 36085424 36086200 -109503088 + L1ME1 LINE L1 792 1592 -4814 3198 234 73 28 chr10 36086239 36088018 -109501270 + L1ME1 LINE L1 4434 6402 -24 183 80 0 0 chr10 36089384 36089409 -109499879 + (GA)n Simple_repeat Simple_repeat 1 25 0 274 269 59 50 chr10 36089508 36089627 -109499661 + MIR SINE MIR 49 169 -39 506 274 102 21 chr10 36090673 36090859 -109498429 + MER63A DNA MER1_type 1 201 -9 676 108 0 18 chr10 36090916 36091027 -109498261 + LTR7 LTR ERV1 296 404 -46 360 0 0 0 chr10 36091027 36091067 -109498221 + (CA)n Simple_repeat Simple_repeat 1 40 0 2286 107 0 0 chr10 36092597 36092895 -109496393 - AluSx SINE Alu -14 298 1 1610 127 59 0 chr10 36092925 36093161 -109496127 - L1PA10 LINE L1 -11 6157 5908 297 0 0 0 chr10 36095309 36095342 -109493946 + (TG)n Simple_repeat Simple_repeat 2 34 0 273 151 0 0 chr10 36096156 36096209 -109493079 + GA-rich Low_complexity Low_complexity 4 56 0 295 228 8 36 chr10 36096745 36096847 -109492441 + L1MDb LINE L1 2397 2521 -3907 2141 151 45 19 chr10 36096881 36097259 -109492029 + MER61D LTR ERV1 114 501 0 2872 250 85 33 chr10 36097259 36098541 -109490747 + L1MDb LINE L1 2492 3840 -2566 2082 138 3 3 chr10 36098545 36098843 -109490445 + AluSx SINE Alu 1 298 -14 526 290 97 6 chr10 36100221 36100397 -109488891 + MIR SINE MIR 46 237 -25 207 322 67 0 chr10 36100609 36100699 -109488589 - L3 LINE CR1 -505 1072 977 203 327 0 0 chr10 36100974 36101026 -109488262 + (TG)n Simple_repeat Simple_repeat 2 53 0 388 348 50 50 chr10 36101180 36101439 -109487849 + L2 LINE L2 2990 3248 -24 298 351 40 0 chr10 36101554 36101702 -109487586 - MIR SINE MIR -6 256 103 23 0 0 0 chr10 36102285 36102308 -109486980 + AT_rich Low_complexity Low_complexity 1 23 0 726 291 36 8 chr10 36103251 36103502 -109485786 + MER46C DNA MER2_type 80 337 -1 1170 292 134 38 chr10 36103540 36104301 -109484987 + L2 LINE L2 839 1672 -1642 1565 188 20 14 chr10 36104312 36104605 -109484683 + AluJo SINE Alu 1 295 -17 225 0 0 0 chr10 36105689 36105714 -109483574 + (TG)n Simple_repeat Simple_repeat 2 26 0 183 222 0 0 chr10 36108321 36108366 -109480922 + (TG)n Simple_repeat Simple_repeat 2 46 0 207 0 0 0 chr10 36108981 36109004 -109480284 + (TG)n Simple_repeat Simple_repeat 1 23 0 183 80 0 0 chr10 36112084 36112109 -109477179 + (C)n Simple_repeat Simple_repeat 1 25 0 207 182 0 0 chr10 36112278 36112322 -109476966 + (TCTCTG)n Simple_repeat Simple_repeat 6 49 0 209 267 0 0 chr10 36113097 36113142 -109476146 + (CGTG)n Simple_repeat Simple_repeat 4 48 0 332 380 0 0 chr10 36117881 36118010 -109471278 + (CGG)n Simple_repeat Simple_repeat 1 129 0 477 0 0 0 chr10 36119025 36119078 -109470210 + (CA)n Simple_repeat Simple_repeat 2 54 0 206 62 31 0 chr10 36119884 36119916 -109469372 + (TG)n Simple_repeat Simple_repeat 2 34 0 366 115 0 0 chr10 36120093 36120154 -109469134 + (TG)n Simple_repeat Simple_repeat 1 61 0 25 0 0 0 chr10 36120466 36120491 -109468797 + GC_rich Low_complexity Low_complexity 1 25 0 411 107 0 0 chr10 36121008 36121083 -109468205 + (CA)n Simple_repeat Simple_repeat 1 75 0 285 98 0 0 chr10 36121213 36121254 -109468034 + (TCTCCC)n Simple_repeat Simple_repeat 5 45 0 216 97 0 0 chr10 36121269 36121300 -109467988 + (TA)n Simple_repeat Simple_repeat 1 31 0 207 280 0 0 chr10 36122327 36122377 -109466911 + (TG)n Simple_repeat Simple_repeat 1 50 0 209 286 0 0 chr10 36122807 36122856 -109466432 + (TG)n Simple_repeat Simple_repeat 2 50 0 417 39 0 0 chr10 36122955 36123006 -109466282 + (CA)n Simple_repeat Simple_repeat 2 52 0 252 86 0 0 chr10 36123200 36123235 -109466053 + (CA)n Simple_repeat Simple_repeat 2 36 0 285 29 0 0 chr10 36123360 36123394 -109465894 + (CA)n Simple_repeat Simple_repeat 2 35 0 183 80 0 0 chr10 36123460 36123485 -109465803 + (TG)n Simple_repeat Simple_repeat 2 26 0 189 121 0 0 chr10 36123528 36123561 -109465727 + (TCTCTG)n Simple_repeat Simple_repeat 4 36 0 225 0 0 0 chr10 36123565 36123590 -109465698 + (TG)n Simple_repeat Simple_repeat 1 25 0 213 94 0 0 chr10 36123994 36124026 -109465262 + (TG)n Simple_repeat Simple_repeat 1 32 0 281 132 0 19 chr10 36124476 36124529 -109464759 + (CA)n Simple_repeat Simple_repeat 2 53 0 471 157 0 0 chr10 36124997 36125086 -109464202 + (TG)n Simple_repeat Simple_repeat 2 90 0 195 139 0 0 chr10 36132556 36132592 -109456696 + (CCG)n Simple_repeat Simple_repeat 3 38 0 249 281 16 33 chr10 36132919 36133040 -109456248 + (CGG)n Simple_repeat Simple_repeat 1 119 0 249 159 0 0 chr10 36134015 36134059 -109455229 + (TG)n Simple_repeat Simple_repeat 2 45 0 216 0 0 0 chr10 36134808 36134832 -109454456 + (CA)n Simple_repeat Simple_repeat 1 24 0 477 0 0 0 chr10 36140022 36140075 -109449213 + (TG)n Simple_repeat Simple_repeat 1 53 0 183 167 0 0 chr10 36140429 36140471 -109448817 + CT-rich Low_complexity Low_complexity 1 42 0 207 100 0 0 chr10 36140823 36140853 -109448435 + (TCCC)n Simple_repeat Simple_repeat 2 31 0 426 85 0 0 chr10 36142395 36142454 -109446834 + (TG)n Simple_repeat Simple_repeat 1 59 0 246 174 0 0 chr10 36143182 36143228 -109446060 + (CA)n Simple_repeat Simple_repeat 1 46 0 396 71 0 0 chr10 36144686 36144742 -109444546 + (TG)n Simple_repeat Simple_repeat 1 56 0 297 0 0 0 chr10 36145810 36145843 -109443445 + (TG)n Simple_repeat Simple_repeat 2 34 0 339 113 0 0 chr10 36146657 36146710 -109442578 + (GGGA)n Simple_repeat Simple_repeat 4 56 0 241 227 0 34 chr10 36147246 36147334 -109441954 + L1MEc LINE L1 2246 2330 -4066 1931 161 42 16 chr10 36147382 36147760 -109441528 + MER61D LTR ERV1 114 501 0 2823 262 66 35 chr10 36147761 36149048 -109440240 + L1MEc LINE L1 2300 3546 -2669 1953 132 0 4 chr10 36149048 36149328 -109439960 + AluSx SINE Alu 1 279 -33 306 0 0 0 chr10 36149328 36149362 -109439926 + (CA)n Simple_repeat Simple_repeat 1 34 0 2823 262 66 35 chr10 36149362 36149642 -109439646 + L1MEc LINE L1 3545 3916 -2299 318 254 42 74 chr10 36149653 36149870 -109439418 + L1MCc LINE L1 20 229 -6194 498 356 77 79 chr10 36149884 36150469 -109438819 + L1MCc LINE L1 577 1160 -5262 1891 232 76 49 chr10 36150509 36150642 -109438646 + L1MCc LINE L1 1024 1152 -5789 4251 175 18 8 chr10 36150642 36151362 -109437926 - MER44D DNA MER2_type -3 602 4 1891 232 76 49 chr10 36151362 36152373 -109436915 + L1MCc LINE L1 1152 2212 -4729 227 261 14 0 chr10 36152374 36152443 -109436845 + L1MCc LINE L1 2300 2369 -4572 1425 156 4 13 chr10 36152443 36152681 -109436607 + AluSg/x SINE Alu 68 303 -9 334 220 89 39 chr10 36152695 36153116 -109436172 + L1MCc LINE L1 2488 3010 -4112 305 235 49 49 chr10 36153117 36153219 -109436069 - L1MCa LINE L1 -2789 3637 3536 385 308 48 51 chr10 36153223 36153592 -109435696 + L1ME3 LINE L1 5884 6724 -7 307 228 37 103 chr10 36153476 36153612 -109435676 - L1MCa LINE L1 -4362 2064 1938 * 3279 151 13 6 chr10 36155946 36156469 -109432819 - MER1A DNA MER1_type 0 527 1 228 319 0 0 chr10 36156492 36156564 -109432724 - MIR SINE MIR -39 223 152 224 374 18 31 chr10 36157019 36157182 -109432106 + MIR SINE MIR 35 195 -67 204 240 0 40 chr10 36159034 36159084 -109430204 + C-rich Low_complexity Low_complexity 3 50 0 957 39 0 23 chr10 36159354 36159482 -109429806 - L1PA13 LINE L1 0 6163 6039 382 145 181 0 chr10 36159482 36159565 -109429723 + MER4A LTR ERV1 1 98 -566 1658 150 169 68 chr10 36159565 36159932 -109429356 + MER4A LTR ERV1 261 664 0 1419 76 5 5 chr10 36159932 36160130 -109429158 - L1PA13 LINE L1 -121 6042 5845 397 305 147 20 chr10 36160232 36160429 -109428859 + MIR SINE MIR 15 236 -26 1555 199 78 9 chr10 36160456 36160777 -109428511 - MER61A LTR ERV1 0 343 1 2965 118 37 76 chr10 36161076 36161618 -109427670 + LTR26B LTR ERV1 11 531 0 1425 203 32 32 chr10 36163703 36163817 -109425471 + AluJo SINE Alu 1 114 -198 2399 163 19 16 chr10 36163817 36164241 -109425047 + MSTB LTR MaLR 1 425 -1 1425 203 32 32 chr10 36164241 36164436 -109424852 + AluJo SINE Alu 113 310 -2 2402 94 3 0 chr10 36166321 36166630 -109422658 - AluSp SINE Alu -3 310 1 25 0 0 0 chr10 36168165 36168190 -109421098 + AT_rich Low_complexity Low_complexity 1 25 0 435 252 0 24 chr10 36168246 36168405 -109420883 - MIR SINE MIR -61 147 25 193 282 77 0 chr10 36168474 36168552 -109420736 - MIR SINE MIR -106 102 19 2246 109 0 13 chr10 36172187 36172490 -109416798 + AluSq SINE Alu 1 299 -14 186 342 25 0 chr10 36172510 36172589 -109416699 - L2 LINE L2 0 3313 3233 1978 139 0 14 chr10 36172914 36173209 -109416079 + AluJb SINE Alu 1 291 -21 400 129 58 6 chr10 36173226 36173397 -109415891 + (TA)n Simple_repeat Simple_repeat 1 180 0 365 289 103 73 chr10 36173549 36173850 -109415438 + L1ME LINE L1 5354 5663 -458 28 48 0 0 chr10 36174637 36174679 -109414609 + AT_rich Low_complexity Low_complexity 1 42 0 2336 99 0 0 chr10 36175002 36175333 -109413955 - AluSx SINE Alu 0 331 1 1945 142 26 0 chr10 36176209 36176511 -109412777 + AluSx SINE Alu 1 310 -2 1326 158 0 0 chr10 36176548 36176750 -109412538 + AluSg/x SINE Alu 98 299 -11 2149 131 0 0 chr10 36177688 36177993 -109411295 + AluSg SINE Alu 2 306 -4 211 218 0 18 chr10 36178621 36178676 -109410612 + MER5A DNA MER1_type 111 164 -25 1821 160 0 7 chr10 36179234 36179534 -109409754 - AluJb SINE Alu -4 308 11 1759 10 0 0 chr10 36179568 36179765 -109409523 - L1PA3 LINE L1 0 6155 5959 4049 128 3 13 chr10 36180624 36180906 -109408382 + L1PB3 LINE L1 5516 5799 -355 240 35 0 0 chr10 36180906 36180935 -109408353 + (TC)n Simple_repeat Simple_repeat 2 30 0 * 249 33 0 0 chr10 36180934 36180964 -109408324 + (TA)n Simple_repeat Simple_repeat 1 30 0 4049 128 3 13 chr10 36180935 36180963 -109408325 + L1PB3 LINE L1 5799 5826 -328 300 27 0 0 chr10 36180963 36181000 -109408288 + (CA)n Simple_repeat Simple_repeat 2 38 0 4049 128 3 13 chr10 36181000 36181352 -109407936 + L1PB3 LINE L1 5826 6144 -10 226 250 26 0 chr10 36181929 36182005 -109407283 - MIR SINE MIR -10 252 175 2267 102 3 0 chr10 36182535 36182828 -109406460 + AluSq SINE Alu 1 294 -19 477 249 53 21 chr10 36183231 36183420 -109405868 + L1ME3A LINE L1 5084 5278 -868 1237 218 136 12 chr10 36183423 36183754 -109405534 - MLT1F1 LTR MaLR -8 559 188 710 79 55 12 chr10 36183756 36183920 -109405368 + (TAGA)n Simple_repeat Simple_repeat 2 172 0 1896 134 16 32 chr10 36184022 36184335 -109404953 + AluSx SINE Alu 5 312 0 318 255 38 19 chr10 36184339 36184445 -109404843 - MLT1F1 LTR MaLR -485 108 1 2473 274 36 15 chr10 36184450 36185311 -109403977 + L1ME3A LINE L1 5283 6161 -9 22 0 0 0 chr10 36185383 36185405 -109403883 + AT_rich Low_complexity Low_complexity 1 22 0 2116 115 31 0 chr10 36185575 36185861 -109403427 + AluSx SINE Alu 1 295 -17 480 200 0 0 chr10 36186125 36186230 -109403058 + (TG)n Simple_repeat Simple_repeat 2 106 0 2316 110 0 0 chr10 36186659 36186960 -109402328 - AluSg SINE Alu -9 301 1 195 100 0 0 chr10 36187606 36187636 -109401652 + (A)n Simple_repeat Simple_repeat 1 30 0 266 340 50 13 chr10 36188653 36188812 -109400476 + L2 LINE L2 2542 2706 -608 1143 291 48 39 chr10 36188822 36189364 -109399924 - HERVL LTR ERVL -1243 4411 3865 339 353 39 13 chr10 36189396 36189552 -109399736 - HERVL LTR ERVL -1939 3825 3666 1792 110 6 110 chr10 36189552 36189897 -109399391 - AluSc SINE Alu 0 309 1 1172 164 18 50 chr10 36189902 36190122 -109399166 - AluJo SINE Alu -17 295 83 2244 330 64 35 chr10 36190194 36191173 -109398115 - HERVL LTR ERVL -2101 3553 2475 1872 131 39 20 chr10 36191173 36191479 -109397809 - AluJo SINE Alu 0 312 1 2244 330 64 35 chr10 36191479 36192305 -109396983 - HERVL LTR ERVL -3179 2475 1675 393 217 96 0 chr10 36192368 36192451 -109396837 + MER58A DNA MER1_type 1 91 -16 745 321 8 8 chr10 36192493 36192745 -109396543 - HERVL LTR ERVL -3882 1114 863 1524 161 56 25 chr10 36192745 36192834 -109396454 - AluJb SINE Alu -14 298 213 2844 128 22 54 chr10 36192834 36193336 -109395952 + LTR19A LTR ERV1 1 486 0 1524 161 56 25 chr10 36193336 36193531 -109395757 - AluJb SINE Alu -99 213 5 329 297 106 64 chr10 36193902 36194070 -109395218 - HERVL LTR ERVL -4570 426 266 222 37 0 0 chr10 36194070 36194097 -109395191 + (TA)n Simple_repeat Simple_repeat 2 28 0 2150 118 7 3 chr10 36194097 36194393 -109394895 - AluSc SINE Alu -12 297 1 329 297 106 64 chr10 36194393 36194630 -109394658 - HERVL LTR ERVL -4729 267 3 1030 315 39 24 chr10 36194632 36195089 -109394199 - LTR16B LTR ERVL 0 464 1 1657 199 99 54 chr10 36195094 36195267 -109394021 + L1ME1 LINE L1 4583 4747 -1399 1854 164 29 32 chr10 36195267 36195614 -109393674 - MER7A DNA MER2_type -2 344 1 1657 199 99 54 chr10 36195614 36195686 -109393602 + L1ME1 LINE L1 4747 4814 -1332 1167 124 139 20 chr10 36195686 36195888 -109393400 + MER30 DNA MER1_type 1 226 -4 1657 199 99 54 chr10 36195888 36196194 -109393094 + L1ME1 LINE L1 4814 5160 -986 713 167 0 0 chr10 36196196 36196310 -109392978 + AluJb SINE Alu 1 114 -198 412 315 0 33 chr10 36196677 36196861 -109392427 + GA-rich Low_complexity Low_complexity 1 178 0 467 213 0 28 chr10 36196929 36197070 -109392218 + AluY SINE Alu 175 311 0 3648 200 52 41 chr10 36197070 36197954 -109391334 + L1ME1 LINE L1 5154 6067 -99 2879 102 102 0 chr10 36197954 36198395 -109390893 - LTR19A LTR ERV1 0 486 1 3648 200 52 41 chr10 36198395 36198492 -109390796 + L1ME1 LINE L1 6067 6161 -5 25 0 0 0 chr10 36198566 36198591 -109390697 + AT_rich Low_complexity Low_complexity 1 25 0 523 226 162 39 chr10 36199594 36199798 -109389490 - MIR SINE MIR -26 236 8 350 215 0 13 chr10 36199800 36199879 -109389409 + MER116 DNA Mariner 3 80 0 229 314 36 29 chr10 36200064 36200204 -109389084 + L3 LINE CR1 1332 1472 -105 6313 65 3 3 chr10 36200380 36201160 -109388128 - LTR17 LTR ERV1 0 780 1 1979 135 30 3 chr10 36201475 36201771 -109387517 - AluSx SINE Alu -7 305 2 206 162 27 0 chr10 36203667 36203704 -109385584 + T-rich Low_complexity Low_complexity 2 39 0 671 181 94 56 chr10 36204432 36204592 -109384696 + FAM SINE Alu 1 166 -9 1783 171 0 7 chr10 36204596 36204909 -109384379 + AluJo SINE Alu 3 313 0 21 0 0 0 chr10 36205018 36205039 -109384249 + AT_rich Low_complexity Low_complexity 1 21 0 261 358 22 8 chr10 36205186 36205320 -109383968 + L2 LINE L2 2681 2816 -498 302 256 24 61 chr10 36205665 36205829 -109383459 + MER113 DNA MER1_type? 7 164 -357 261 297 68 0 chr10 36205829 36205903 -109383385 + L2 LINE L2 3163 3241 -31 522 279 128 21 chr10 36205916 36206043 -109383245 + MER113 DNA MER1_type? 146 258 -263 2976 118 27 0 chr10 36206043 36206457 -109382831 + MSTA LTR MaLR 4 428 0 522 279 128 21 chr10 36206457 36206666 -109382622 + MER113 DNA MER1_type? 258 518 -3 1909 154 0 13 chr10 36206941 36207239 -109382049 - AluJb SINE Alu -18 294 1 2311 126 35 32 chr10 36208107 36208481 -109380807 - THE1C LTR MaLR 0 375 1 263 323 121 0 chr10 36208743 36208842 -109380446 - L2 LINE L2 0 3272 3162 366 330 0 0 chr10 36208891 36209003 -109380285 - L2 LINE L2 0 3313 3202 447 260 36 6 chr10 36209133 36209350 -109379938 + L1M4c LINE L1 2033 2265 -4117 1952 121 3 24 chr10 36209356 36209515 -109379773 + AluSg SINE Alu 1 153 -157 5034 51 5 5 chr10 36209515 36210106 -109379182 + LTR10C LTR ERV1 1 591 0 1952 121 3 24 chr10 36210106 36210235 -109379053 + AluSg SINE Alu 153 283 -27 216 0 0 0 chr10 36210239 36210263 -109379025 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 5157 234 22 12 chr10 36210264 36211639 -109377649 + L1M4c LINE L1 2311 3660 -2722 2552 197 119 7 chr10 36211639 36212218 -109377070 - LTR48B LTR ERV1 0 644 1 679 171 0 0 chr10 36212636 36212753 -109376535 + L1MA10 LINE L1 5154 5270 -876 1243 221 0 0 chr10 36212753 36212997 -109376291 + AluSx SINE Alu 1 244 -68 4707 209 29 19 chr10 36213062 36213103 -109376185 + L1MA10 LINE L1 5259 5298 -1036 180 0 0 0 chr10 36213103 36213123 -109376165 + (CAT)n Simple_repeat Simple_repeat 2 21 0 4707 209 29 19 chr10 36213123 36213958 -109375330 + L1MA10 LINE L1 5298 6150 -184 213 39 0 0 chr10 36213958 36213984 -109375304 + (CA)n Simple_repeat Simple_repeat 1 26 0 4707 209 29 19 chr10 36213984 36214164 -109375124 + L1MA10 LINE L1 6150 6327 -7 2544 238 50 41 chr10 36214173 36214467 -109374821 - L1MEc LINE L1 -1081 5134 4844 1772 186 0 10 chr10 36214467 36214768 -109374520 - AluJo SINE Alu -12 300 3 2544 238 50 41 chr10 36214768 36215445 -109373843 - L1MEc LINE L1 -1371 4844 4154 329 200 13 13 chr10 36215516 36215604 -109373684 - L1MEc LINE L1 -2374 3841 3754 409 94 16 0 chr10 36215605 36215669 -109373619 + (TTCC)n Simple_repeat Simple_repeat 2 66 0 1456 274 111 40 chr10 36215677 36215749 -109373539 - L1MEc LINE L1 -2452 3763 3698 1901 175 136 18 chr10 36215749 36216132 -109373156 - MSTA LTR MaLR 0 428 1 1456 274 111 40 chr10 36216132 36217281 -109372007 - L1MEc LINE L1 -2517 3698 2316 918 201 0 73 chr10 36217284 36217488 -109371800 - Tigger5 DNA MER2_type -3 2320 2132 1366 225 16 29 chr10 36217503 36217532 -109371756 - Tigger5 DNA MER2_type -2016 307 279 4330 91 13 2 chr10 36217532 36218080 -109371208 + MER41A LTR ERV1 1 554 0 1366 225 16 29 chr10 36218080 36218361 -109370927 - Tigger5 DNA MER2_type -2044 279 1 724 284 41 86 chr10 36219315 36220387 -109368901 - L1MEc LINE L1 -4583 1813 790 1657 246 93 14 chr10 36220904 36221401 -109367887 - MLT1G1 LTR MaLR -2 593 1 422 312 102 32 chr10 36221697 36222098 -109367190 - L2 LINE L2 -1103 2211 1783 545 138 0 0 chr10 36222107 36222187 -109367101 - MER41B LTR ERV1 0 635 556 2030 85 8 8 chr10 36222295 36222555 -109366733 - AluSx SINE Alu -29 283 24 376 321 113 54 chr10 36222794 36223536 -109365752 - L2 LINE L2 -2190 1124 339 4383 134 19 34 chr10 36223697 36223998 -109365290 + LTR8A LTR ERV1 1 305 -422 5134 127 22 17 chr10 36223998 36224773 -109364515 - MER4E LTR ERV1 0 779 1 4383 134 19 34 chr10 36224773 36225209 -109364079 + LTR8A LTR ERV1 305 727 0 590 270 92 80 chr10 36227694 36228017 -109361271 - MLT1H LTR MaLR 0 549 218 2403 148 11 16 chr10 36228017 36228394 -109360894 + THE1C LTR MaLR 1 375 0 590 270 92 80 chr10 36228394 36228496 -109360792 - MLT1H LTR MaLR -331 218 119 2299 118 28 22 chr10 36228717 36229072 -109360216 - THE1B LTR MaLR 0 364 8 180 167 130 19 chr10 36230569 36230616 -109358672 - L3 LINE CR1 -880 697 642 441 0 0 0 chr10 36230616 36230665 -109358623 + (TCTA)n Simple_repeat Simple_repeat 4 52 0 2562 158 41 0 chr10 36233516 36233928 -109355360 - MSTB1 LTR MaLR 0 432 4 229 313 40 0 chr10 36234286 36234385 -109354903 - MIR SINE MIR -56 206 104 1167 214 54 90 chr10 36234402 36234790 -109354498 - MLT1B LTR MaLR -16 374 1 231 217 22 0 chr10 36234790 36234836 -109354452 - MIR SINE MIR -126 82 36 184 281 201 58 chr10 36235178 36235317 -109353971 + MIR3 SINE MIR 16 174 -34 23 33 0 0 chr10 36235923 36235953 -109353335 + AT_rich Low_complexity Low_complexity 1 30 0 277 240 53 93 chr10 36237293 36237414 -109351874 + MIR SINE MIR 33 148 -114 2253 110 0 31 chr10 36237414 36237733 -109351555 - AluSx SINE Alu -3 309 1 277 240 53 93 chr10 36237733 36237761 -109351527 + MIR SINE MIR 148 176 -86 379 202 76 59 chr10 36237761 36237880 -109351408 - MIR SINE MIR -62 200 80 751 232 54 54 chr10 36238117 36238181 -109351107 - MIR SINE MIR -8 254 191 1683 121 0 4 chr10 36238181 36238412 -109350876 + MER30 DNA MER1_type 1 230 0 751 232 54 54 chr10 36238412 36238571 -109350717 - MIR SINE MIR -70 192 31 487 161 0 21 chr10 36238708 36238801 -109350487 - LTR33 LTR ERVL -7 514 424 1739 160 22 0 chr10 36238937 36239375 -109349913 + AluSx SINE Alu 1 444 0 228 111 0 0 chr10 36239412 36239448 -109349840 + (GA)n Simple_repeat Simple_repeat 1 36 0 602 278 91 27 chr10 36239458 36239721 -109349567 - LTR33 LTR ERVL -237 284 5 267 317 33 55 chr10 36239748 36239931 -109349357 - L2 LINE L2 -1386 1928 1750 296 250 192 0 chr10 36240382 36240486 -109348802 + LTR47A LTR ERVL 261 384 -68 1195 104 0 0 chr10 36241895 36242059 -109347229 + AluY SINE Alu 137 300 -11 182 269 0 39 chr10 36242201 36242253 -109347035 - L2 LINE L2 0 3313 3264 202 345 80 85 chr10 36242573 36242661 -109346627 - L2 LINE L2 0 3272 3185 1975 142 0 7 chr10 36242661 36242994 -109346294 - AluSq SINE Alu 0 313 1 202 345 80 85 chr10 36242994 36243354 -109345934 - L2 LINE L2 -87 3185 2826 2057 164 9 18 chr10 36244204 36244546 -109344742 + MER44D DNA MER2_type 1 609 0 452 316 12 36 chr10 36245175 36245343 -109343945 + MER5A DNA MER1_type 26 189 0 396 129 0 29 chr10 36245726 36245796 -109343492 + MLT1A1 LTR MaLR 1 68 -297 928 248 139 34 chr10 36245796 36246221 -109343067 + LTR1B LTR ERV1 28 496 -330 1982 112 34 7 chr10 36246221 36246516 -109342772 + AluSq SINE Alu 11 313 0 270 209 48 150 chr10 36246543 36246730 -109342558 + LTR28 LTR ERV1 838 1005 -15 1490 205 38 7 chr10 36246753 36247046 -109342242 + MLT1A1 LTR MaLR 64 365 0 26 88 0 0 chr10 36248250 36248318 -109340970 + AT_rich Low_complexity Low_complexity 1 68 0 1297 284 91 45 chr10 36248370 36249174 -109340114 - L1M4 LINE L1 -922 5224 4384 2130 249 47 74 chr10 36249202 36249280 -109340008 + L1ME3A LINE L1 5254 5333 -837 1846 181 0 3 chr10 36249280 36249589 -109339699 + AluJb SINE Alu 1 308 -4 2130 249 47 74 chr10 36249589 36249703 -109339585 + L1ME3A LINE L1 5333 5449 -721 1947 162 23 45 chr10 36249703 36249806 -109339482 + MER2 DNA MER2_type 1 105 -239 1554 161 88 0 chr10 36249806 36250100 -109339188 + AluSx SINE Alu 1 317 0 1947 162 23 45 chr10 36250100 36250347 -109338941 + MER2 DNA MER2_type 105 344 0 2130 249 47 74 chr10 36250347 36251033 -109338255 + L1ME3A LINE L1 5449 6109 -61 362 304 19 0 chr10 36251447 36251608 -109337680 + (TA)n Simple_repeat Simple_repeat 1 164 0 311 247 36 13 chr10 36252270 36252578 -109336710 + (TGAA)n Simple_repeat Simple_repeat 1 315 0 359 328 35 18 chr10 36252705 36252876 -109336412 - LTR16C LTR ERVL -4 487 314 1325 210 176 29 chr10 36253118 36253520 -109335768 + MLT2B1 LTR ERVL 1 467 -53 468 51 0 0 chr10 36253520 36253579 -109335709 + (TC)n Simple_repeat Simple_repeat 2 60 0 1325 210 176 29 chr10 36253579 36253591 -109335697 + MLT2B1 LTR ERVL 467 476 -44 252 167 42 0 chr10 36253618 36253690 -109335598 + (TA)n Simple_repeat Simple_repeat 1 75 0 249 108 0 0 chr10 36253691 36253728 -109335560 + (CA)n Simple_repeat Simple_repeat 2 38 0 1564 194 29 51 chr10 36253728 36253871 -109335417 + MER2 DNA MER2_type 3 148 -197 1457 94 94 9 chr10 36253871 36254083 -109335205 - MER30 DNA MER1_type 0 230 1 1564 194 29 51 chr10 36254083 36254290 -109334998 + MER2 DNA MER2_type 148 345 0 2847 132 4 69 chr10 36255386 36255465 -109333823 + L1PA15 LINE L1 5703 5786 -379 2076 124 6 19 chr10 36255465 36255779 -109333509 + AluSx SINE Alu 1 310 -2 2847 132 4 69 chr10 36255779 36256192 -109333096 + L1PA15 LINE L1 5786 6163 -2 3226 97 12 7 chr10 36256408 36256840 -109332448 - MER57B LTR ERV1 0 434 1 1059 248 129 16 chr10 36257457 36257884 -109331404 - MLT1D LTR MaLR 0 505 31 2021 139 16 3 chr10 36257983 36258286 -109331002 - AluJb SINE Alu -5 307 1 2392 131 64 5 chr10 36258942 36259346 -109329942 - MSTA LTR MaLR 0 428 1 353 352 36 10 chr10 36259646 36259842 -109329446 + MIR SINE MIR 8 208 -54 2405 162 70 4 chr10 36261022 36261497 -109327791 - L1MB4 LINE L1 -2 6178 5673 1491 174 49 28 chr10 36261497 36261831 -109327457 - MSTA LTR MaLR -9 366 1 1443 178 0 46 chr10 36261831 36262073 -109327215 - L1MB4 LINE L1 -492 5688 5461 1950 201 56 7 chr10 36262073 36262516 -109326772 + MER31B LTR ERV1 2 466 0 1443 178 0 46 chr10 36262516 36262577 -109326711 - L1MB4 LINE L1 -719 5461 5399 1515 181 23 43 chr10 36262710 36263009 -109326279 + AluJo SINE Alu 1 293 -19 1901 141 25 3 chr10 36263011 36263295 -109325993 + AluSg SINE Alu 1 290 -20 210 234 64 0 chr10 36264565 36264612 -109324676 - MER91A DNA MER1_type -19 177 128 2085 108 0 74 chr10 36265439 36265763 -109323525 - AluSq SINE Alu -13 300 1 360 309 53 33 chr10 36265997 36266181 -109323107 - MIR SINE MIR -69 139 17 527 216 10 0 chr10 36266880 36266977 -109322311 - MER58A DNA MER1_type -6 101 4 465 319 123 36 chr10 36269199 36269822 -109319466 + L2 LINE L2 2599 3285 -28 477 236 50 71 chr10 36269914 36270096 -109319192 + L1ME LINE L1 5551 5728 -393 387 0 0 0 chr10 36271221 36271264 -109318024 + (TG)n Simple_repeat Simple_repeat 2 44 0 30 0 0 0 chr10 36271860 36271890 -109317398 + AT_rich Low_complexity Low_complexity 1 30 0 2029 133 3 30 chr10 36272043 36272345 -109316943 - AluSq SINE Alu -19 294 1 188 200 29 0 chr10 36273116 36273151 -109316137 + MIR SINE MIR 38 73 -135 2260 174 87 5 chr10 36273211 36273637 -109315651 + LOR1b LTR ERV1 1 461 0 2323 112 0 0 chr10 36273886 36274191 -109315097 + AluSq SINE Alu 1 305 -8 718 138 7 90 chr10 36276508 36276653 -109312635 - FLAM_A SINE Alu 0 133 1 189 0 0 0 chr10 36277037 36277058 -109312230 + (TGAA)n Simple_repeat Simple_repeat 3 23 0 1638 168 26 53 chr10 36277882 36278185 -109311103 + AluJo SINE Alu 1 295 -17 2347 100 10 0 chr10 36279123 36279432 -109309856 - AluSq SINE Alu 0 313 2 1273 129 20 0 chr10 36279551 36279753 -109309535 + MER2 DNA MER2_type 5 210 -135 560 70 12 0 chr10 36280484 36280570 -109308718 + (TA)n Simple_repeat Simple_repeat 1 87 0 1636 161 24 37 chr10 36281270 36281568 -109307720 + AluJo SINE Alu 1 294 -18 30 0 0 0 chr10 36281568 36281598 -109307690 + AT_rich Low_complexity Low_complexity 1 30 0 186 71 0 0 chr10 36282079 36282107 -109307181 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 2317 115 0 3 chr10 36282111 36282424 -109306864 - AluSx SINE Alu 0 312 1 192 40 0 0 chr10 36282921 36282946 -109306342 + (TAAA)n Simple_repeat Simple_repeat 4 28 0 198 0 0 0 chr10 36283738 36283760 -109305528 + (T)n Simple_repeat Simple_repeat 1 22 0 3063 125 7 0 chr10 36285034 36285458 -109303830 + MER1A DNA MER1_type 103 529 0 190 346 0 0 chr10 36285579 36285657 -109303631 + L2 LINE L2 2890 2967 -305 373 203 219 41 chr10 36286248 36286371 -109302917 + MIR SINE MIR 7 151 -111 1935 171 9 91 chr10 36286405 36286453 -109302835 + MER82 DNA MER2_type 2 52 -601 1980 146 4 4 chr10 36286453 36286734 -109302554 + AluJo SINE Alu 1 281 -31 212 0 36 0 chr10 36286738 36286766 -109302522 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 1935 171 9 91 chr10 36286766 36287163 -109302125 + MER82 DNA MER2_type 55 415 -238 1553 206 28 22 chr10 36287166 36287504 -109301784 + MLT2C1 LTR ERVL 83 406 -8 1927 134 55 30 chr10 36287558 36287924 -109301364 - THE1C LTR MaLR 0 375 1 298 238 0 0 chr10 36288119 36288182 -109301106 - MIR3 SINE MIR -6 202 140 263 320 52 41 chr10 36289468 36289640 -109299648 - MIR3 SINE MIR -18 190 17 266 191 79 0 chr10 36290777 36290840 -109298448 + MIR SINE MIR 185 252 -10 2203 111 3 0 chr10 36291181 36291470 -109297818 - AluSg SINE Alu -20 290 1 219 127 48 0 chr10 36291512 36291575 -109297713 + (TA)n Simple_repeat Simple_repeat 1 66 0 28 48 0 0 chr10 36291644 36291686 -109297602 + AT_rich Low_complexity Low_complexity 1 42 0 28 48 0 0 chr10 36291742 36291784 -109297504 + AT_rich Low_complexity Low_complexity 1 42 0 319 340 45 13 chr10 36291815 36291971 -109297317 - HAL1 LINE L1 -769 1738 1578 261 295 69 98 chr10 36292063 36292510 -109296778 - MLT1J LTR MaLR -76 435 2 655 128 0 0 chr10 36292765 36292859 -109296429 - AluJb SINE Alu -16 296 203 2101 129 0 10 chr10 36293677 36293986 -109295302 - AluSx SINE Alu -6 306 1 1558 190 4 4 chr10 36294171 36294439 -109294849 - AluJb SINE Alu -44 268 1 1351 192 4 0 chr10 36294441 36294717 -109294571 - L1 LINE L1 -3104 3042 2766 283 115 0 19 chr10 36294717 36294769 -109294519 - Alu SINE Alu 0 302 252 4337 173 10 33 chr10 36297001 36297898 -109291390 - L1MC1 LINE L1 -165 6666 5789 4467 207 49 37 chr10 36298410 36299505 -109289783 - L1MC1 LINE L1 -5145 1489 278 511 179 38 28 chr10 36299677 36299783 -109289505 - MER7A DNA MER2_type -241 105 1 279 0 0 0 chr10 36299788 36299819 -109289469 + (CA)n Simple_repeat Simple_repeat 2 32 0 34 55 0 0 chr10 36300031 36300086 -109289202 + AT_rich Low_complexity Low_complexity 1 55 0 1099 111 6 6 chr10 36300920 36301100 -109288188 + (TTC)n Simple_repeat Simple_repeat 1 180 0 2214 119 0 0 chr10 36302542 36302844 -109286444 + AluSx SINE Alu 1 302 -10 235 331 69 14 chr10 36303460 36303605 -109285683 - L2 LINE L2 -190 3082 2930 1440 116 4 4 chr10 36353998 36354223 -109235065 + L1MA4A LINE L1 6072 6296 -7 1373 168 6 128 chr10 36354245 36354572 -109234716 + AluJb SINE Alu 1 287 -15 1044 121 56 0 chr10 36356226 36356424 -109232864 - L1MA8 LINE L1 -5 6286 6078 2323 102 3 0 chr10 36356426 36356730 -109232558 - AluSg SINE Alu -5 305 1 404 182 0 13 chr10 36356732 36356809 -109232479 - AluJo SINE Alu -176 136 61 805 207 86 94 chr10 36356818 36357133 -109232155 + L2 LINE L2 2758 3074 -239 2070 122 7 14 chr10 36357947 36358241 -109231047 - AluSx SINE Alu -20 292 1 1560 180 54 0 chr10 36358325 36358447 -109230841 + AluJo SINE Alu 1 115 -197 189 0 0 0 chr10 36358447 36358468 -109230820 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 1560 180 54 0 chr10 36358468 36358623 -109230665 + AluJo SINE Alu 115 293 -19 231 301 60 24 chr10 36358662 36358745 -109230543 - MIR3 SINE MIR -9 199 114 696 266 47 10 chr10 36358766 36358958 -109230330 - MIR SINE MIR 0 262 64 240 222 74 49 chr10 36359005 36359086 -109230202 - MIR SINE MIR -107 101 19 3007 83 3 0 chr10 36360265 36360628 -109228660 + THE1B LTR MaLR 1 364 0 27 0 0 0 chr10 36360865 36360892 -109228396 + AT_rich Low_complexity Low_complexity 1 27 0 341 94 19 0 chr10 36361426 36361479 -109227809 + MER9 LTR ERVK 1 54 -457 397 294 90 28 chr10 36361599 36361776 -109227512 + LTR33 LTR ERVL 334 521 0 193 307 133 0 chr10 36362154 36362229 -109227059 - MIR3 SINE MIR -21 187 103 2018 150 0 0 chr10 36362398 36362692 -109226596 - AluJb SINE Alu -18 294 1 2296 117 0 0 chr10 36362827 36363135 -109226153 + AluSx SINE Alu 1 308 -4 295 214 34 0 chr10 36363150 36363239 -109226049 + (TATATG)n Simple_repeat Simple_repeat 3 94 0 1543 193 23 3 chr10 36363735 36364040 -109225248 - AluJb SINE Alu -1 311 1 5670 86 9 0 chr10 36364516 36365201 -109224087 + LTR8 LTR ERV1 1 691 0 257 352 24 24 chr10 36365617 36365742 -109223546 + MIR SINE MIR 22 146 -62 1497 171 4 29 chr10 36367312 36367586 -109221702 + AluJo SINE Alu 21 287 -25 1092 126 0 7 chr10 36369300 36369601 -109219687 + (GGAA)n Simple_repeat Simple_repeat 4 300 0 999 125 0 0 chr10 36370198 36370334 -109218954 + AluSq/x SINE Alu 1 136 -176 683 80 20 20 chr10 36370336 36370436 -109218852 + AluY SINE Alu 210 309 -2 998 167 0 0 chr10 36370568 36370730 -109218558 + AluSx SINE Alu 144 305 -5 2201 128 0 0 chr10 36371660 36371957 -109217331 - AluSx SINE Alu -15 297 1 1714 172 0 40 chr10 36372818 36373120 -109216168 - AluJb SINE Alu -22 290 1 243 359 39 64 chr10 36373444 36373678 -109215610 - L2 LINE L2 -13 3259 3032 1731 160 59 3 chr10 36373697 36373985 -109215303 + AluJb SINE Alu 1 304 -8 2636 55 0 0 chr10 36374953 36375261 -109214027 + AluY SINE Alu 1 308 -3 950 291 19 12 chr10 36375443 36375701 -109213587 - MLT1L LTR MaLR -7 608 349 504 269 72 10 chr10 36375751 36375944 -109213344 - MLT1L LTR MaLR -409 206 2 276 333 12 0 chr10 36375945 36376026 -109213262 - L2 LINE L2 -47 3266 3185 2328 99 3 3 chr10 36376666 36376969 -109212319 - AluSq SINE Alu -10 303 1 3123 153 39 7 chr10 36376982 36377763 -109211525 + L1MA8 LINE L1 4856 5809 -482 367 29 57 14 chr10 36377763 36377833 -109211455 + (TAGA)n Simple_repeat Simple_repeat 2 74 0 3123 153 39 7 chr10 36377833 36378328 -109210960 + L1MA8 LINE L1 5809 6287 -4 1961 107 0 11 chr10 36378402 36378663 -109210625 + AluSx SINE Alu 1 258 -54 561 265 157 10 chr10 36378739 36378943 -109210345 - MIR SINE MIR 0 262 29 322 241 30 108 chr10 36379713 36379909 -109209379 + MIR SINE MIR 38 216 -46 1667 169 30 71 chr10 36380064 36380266 -109209022 - MLT1B LTR MaLR -35 355 173 1870 165 0 16 chr10 36380266 36380569 -109208719 - AluJb SINE Alu -14 298 1 1667 169 30 71 chr10 36380569 36380733 -109208555 - MLT1B LTR MaLR -217 173 4 212 0 36 0 chr10 36380857 36380885 -109208403 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 1725 169 10 7 chr10 36380890 36381185 -109208103 - AluJo SINE Alu -16 296 1 2788 105 0 3 chr10 36381289 36381660 -109207628 - L1PB1 LINE L1 0 6151 5782 223 78 31 62 chr10 36381669 36381733 -109207555 + (TA)n Simple_repeat Simple_repeat 2 63 0 180 357 12 12 chr10 36384217 36384301 -109204987 - MIR SINE MIR -22 240 157 2328 96 6 3 chr10 36384420 36384732 -109204556 - AluSq SINE Alu 0 313 1 219 139 0 0 chr10 36386097 36386133 -109203155 + (T)n Simple_repeat Simple_repeat 1 36 0 334 328 89 64 chr10 36387032 36387706 -109201582 + L2 LINE L2 2196 2886 -428 227 338 0 26 chr10 36387760 36387837 -109201451 + L2 LINE L2 2992 3066 -206 368 324 143 50 chr10 36388231 36388399 -109200889 - L2 LINE L2 -15 3298 3096 2194 133 0 0 chr10 36388399 36388701 -109200587 + AluSq SINE Alu 1 302 -11 368 324 143 50 chr10 36388701 36388791 -109200497 - L2 LINE L2 -217 3096 3016 319 210 25 109 chr10 36388792 36388911 -109200377 - ERVL LTR ERVL -1119 4645 4537 249 180 0 0 chr10 36388950 36389000 -109200288 + CT-rich Low_complexity Low_complexity 3 52 0 2112 315 103 75 chr10 36389061 36390467 -109198821 - ERVL LTR ERVL -1382 4382 2887 4760 170 3 4 chr10 36390467 36391197 -109198091 + MER44D DNA MER2_type 4 604 -1 2112 315 103 75 chr10 36391197 36392040 -109197248 - ERVL LTR ERVL -2877 2887 2069 213 39 0 0 chr10 36392140 36392166 -109197122 + (TTTTC)n Simple_repeat Simple_repeat 2 27 0 2124 121 0 0 chr10 36392168 36392450 -109196838 - AluSx SINE Alu -30 282 1 1206 325 103 44 chr10 36392451 36393530 -109195758 + L2 LINE L2 2148 3309 -4 307 323 82 39 chr10 36393579 36393836 -109195452 - ERVL LTR ERVL -3736 2028 1761 358 348 43 29 chr10 36394533 36394878 -109194410 - L2 LINE L2 -523 2791 2442 233 161 81 48 chr10 36395184 36395246 -109194042 - MER91C DNA MER1_type -20 120 57 207 0 0 0 chr10 36396067 36396090 -109193198 + (CAA)n Simple_repeat Simple_repeat 2 24 0 2222 139 96 3 chr10 36398135 36398507 -109190781 + MSTB1 LTR MaLR 4 410 -22 1659 119 13 0 chr10 36398507 36398734 -109190554 - MER30 DNA MER1_type 0 230 1 265 171 0 61 chr10 36398814 36398896 -109190392 + T-rich Low_complexity Low_complexity 6 82 0 232 157 0 39 chr10 36398988 36399039 -109190249 + T-rich Low_complexity Low_complexity 6 54 0 300 53 0 0 chr10 36400561 36400599 -109188689 + (CA)n Simple_repeat Simple_repeat 1 38 0 367 172 11 11 chr10 36400617 36400704 -109188584 + (TA)n Simple_repeat Simple_repeat 2 88 0 1894 163 0 0 chr10 36400705 36400993 -109188295 - AluSx SINE Alu -24 288 1 409 259 96 32 chr10 36401095 36401241 -109188047 - MIR SINE MIR -65 143 15 21 82 0 0 chr10 36401609 36401658 -109187630 + AT_rich Low_complexity Low_complexity 1 49 0 1587 177 9 78 chr10 36401664 36401986 -109187302 + AluJo SINE Alu 1 300 -2 288 264 0 47 chr10 36402688 36402794 -109186494 + LTR67 LTR ERVL 457 557 0 1849 152 24 3 chr10 36405009 36405299 -109183989 + AluJb SINE Alu 1 296 -16 26 30 0 0 chr10 36405689 36405722 -109183566 + AT_rich Low_complexity Low_complexity 1 33 0 1420 196 0 8 chr10 36405722 36405972 -109183316 - AluJo SINE Alu -64 248 1 714 335 102 39 chr10 36406266 36407078 -109182210 - L2 LINE L2 -475 2839 1977 318 326 21 21 chr10 36407117 36407258 -109182030 - MIR3 SINE MIR -33 175 35 23 0 0 0 chr10 36407592 36407615 -109181673 + AT_rich Low_complexity Low_complexity 1 23 0 4533 131 5 2 chr10 36408002 36408635 -109180653 + MER41B LTR ERV1 1 635 0 21 0 0 0 chr10 36409182 36409203 -109180085 + AT_rich Low_complexity Low_complexity 1 21 0 207 0 0 0 chr10 36409185 36409208 -109180080 + (TTA)n Simple_repeat Simple_repeat 2 24 0 3564 151 54 72 chr10 36410377 36411177 -109178111 + LTR1 LTR ERV1 1 785 0 4054 127 26 2 chr10 36411569 36412189 -109177099 - MER41B LTR ERV1 0 635 1 2162 116 0 29 chr10 36412230 36412541 -109176747 + AluSq SINE Alu 5 306 -7 500 118 0 0 chr10 36414774 36414842 -109174446 + AluJ/FLAM SINE Alu 17 84 -228 24 0 0 0 chr10 36415663 36415687 -109173601 + AT_rich Low_complexity Low_complexity 1 24 0 2006 139 0 0 chr10 36416758 36417067 -109172221 + AluSx SINE Alu 2 310 0 234 0 0 0 chr10 36417788 36417814 -109171474 + (TG)n Simple_repeat Simple_repeat 1 26 0 265 250 0 0 chr10 36418365 36418462 -109170826 + (TTCA)n Simple_repeat Simple_repeat 1 97 0 915 129 0 0 chr10 36418466 36418590 -109170698 - FLAM_C SINE Alu -18 125 2 2355 103 7 0 chr10 36418925 36419235 -109170053 + AluSx SINE Alu 1 312 0 2380 133 23 16 chr10 36419411 36419796 -109169492 - LTR45B LTR ERV1 -98 391 4 1755 215 37 37 chr10 36420191 36420656 -109168632 - MLT1C LTR MaLR 0 467 3 15075 133 30 15 chr10 36420709 36422896 -109166392 + Tigger1 DNA MER2_type 1 2228 -190 1994 156 7 0 chr10 36422896 36423197 -109166091 - AluSx SINE Alu -7 305 3 15075 133 30 15 chr10 36423197 36423391 -109165897 + Tigger1 DNA MER2_type 2228 2418 0 195 167 104 21 chr10 36425310 36425358 -109163930 - MIR SINE MIR -9 253 202 1746 167 29 4 chr10 36425475 36425756 -109163532 + AluJo SINE Alu 5 292 -20 382 260 97 15 chr10 36426016 36426212 -109163076 - L1MC4a LINE L1 -1894 5914 5703 1854 104 23 68 chr10 36426455 36426764 -109162524 - AluSq SINE Alu -18 295 1 233 252 193 47 chr10 36428401 36428662 -109160626 + L1ME4a LINE L1 5754 6072 -49 2092 121 21 0 chr10 36428662 36428952 -109160336 + AluSx SINE Alu 1 296 -16 233 252 193 47 chr10 36428952 36429011 -109160277 + L1ME4a LINE L1 6072 6121 0 2122 73 24 21 chr10 36429014 36429301 -109159987 + AluY SINE Alu 1 288 -23 194 62 31 0 chr10 36429304 36429336 -109159952 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 2074 120 27 3 chr10 36429341 36429641 -109159647 + AluSx SINE Alu 1 307 -5 1870 212 104 103 chr10 36430782 36431474 -109157814 - LTR8A LTR ERV1 -1 726 34 253 283 38 47 chr10 36431594 36431700 -109157588 + MIR3 SINE MIR 85 189 -19 1094 125 0 12 chr10 36432245 36432405 -109156883 - FRAM SINE Alu -9 167 10 1380 186 11 34 chr10 36432416 36432685 -109156603 - AluJb SINE Alu -7 305 43 1345 209 56 48 chr10 36433046 36433386 -109155902 - MER21B LTR ERV1 -1 862 520 1223 195 112 16 chr10 36433386 36433460 -109155828 + LTR39 LTR ERV1 2 67 -716 1909 151 0 24 chr10 36433460 36433758 -109155530 + AluJb SINE Alu 6 296 -16 1223 195 112 16 chr10 36433758 36434021 -109155267 + LTR39 LTR ERV1 67 402 -381 1179 178 26 74 chr10 36434009 36434106 -109155182 + LTR39 LTR ERV1 527 627 -156 * 2147 139 0 3 chr10 36434106 36434416 -109154872 + AluSq SINE Alu 1 309 -4 1179 178 26 74 chr10 36434416 36434588 -109154700 + LTR39 LTR ERV1 627 783 0 1220 199 182 96 chr10 36434595 36434738 -109154550 - MER21B LTR ERV1 -340 523 394 4267 122 8 14 chr10 36434738 36435377 -109153911 - MER41B LTR ERV1 0 635 1 1220 199 182 96 chr10 36435377 36435710 -109153578 - MER21B LTR ERV1 -469 394 6 1865 151 14 0 chr10 36436417 36436720 -109152568 - AluSx SINE Alu 0 307 1 1812 150 0 17 chr10 36437703 36437990 -109151298 + AluJo SINE Alu 2 283 -29 366 302 148 0 chr10 36439198 36439380 -109149908 - MIR SINE MIR -6 256 48 2509 87 0 0 chr10 36439419 36439730 -109149558 - AluSx SINE Alu -1 311 1 216 0 0 0 chr10 36440330 36440354 -109148934 + (CA)n Simple_repeat Simple_repeat 1 24 0 480 71 12 83 chr10 36440629 36440676 -109148612 - MADE1 DNA Mariner -1 79 39 1585 130 153 0 chr10 36440676 36440938 -109148350 + AluSx SINE Alu 1 302 0 480 71 12 83 chr10 36440938 36440974 -109148314 - MADE1 DNA Mariner -41 39 2 457 293 19 56 chr10 36441494 36441572 -109147716 - MIR SINE MIR -44 218 139 2177 100 4 0 chr10 36441572 36441874 -109147414 - AluSx SINE Alu 0 303 1 457 293 19 56 chr10 36441874 36442011 -109147277 - MIR SINE MIR -123 139 13 647 110 53 17 chr10 36442782 36443010 -109146278 + (TCTA)n Simple_repeat Simple_repeat 1 236 0 213 154 0 0 chr10 36443412 36443451 -109145837 + (TG)n Simple_repeat Simple_repeat 1 39 0 973 193 17 0 chr10 36445457 36445638 -109143650 - AluJo SINE Alu -10 302 119 718 183 0 0 chr10 36445673 36445799 -109143489 - AluJo SINE Alu -186 126 1 1499 189 54 4 chr10 36445829 36446109 -109143179 + AluJb SINE Alu 3 296 -16 402 143 0 0 chr10 36446625 36446681 -109142607 - Alu SINE Alu -10 292 237 1892 130 7 0 chr10 36446681 36446951 -109142337 - AluSx SINE Alu -40 272 1 206 343 0 0 chr10 36447072 36447145 -109142143 + L2 LINE L2 3241 3313 0 2075 136 7 0 chr10 36447823 36448131 -109141157 - AluSx SINE Alu 0 312 3 215 260 27 0 chr10 36448582 36448607 -109140681 + (TA)n Simple_repeat Simple_repeat 2 25 -51 2053 129 6 13 chr10 36448607 36448918 -109140370 - AluSx SINE Alu -3 309 1 215 260 27 0 chr10 36448918 36448965 -109140323 + (TA)n Simple_repeat Simple_repeat 25 76 0 870 179 60 0 chr10 36449032 36449183 -109140105 - AluSg/x SINE Alu -16 296 137 1453 236 120 85 chr10 36449224 36449571 -109139717 - MER21B LTR ERV1 -124 739 405 2749 94 6 0 chr10 36449571 36449933 -109139355 - THE1B LTR MaLR 0 364 1 1453 236 120 85 chr10 36449933 36450279 -109139009 - MER21B LTR ERV1 -458 405 22 1760 244 26 24 chr10 36450539 36450997 -109138291 + L1MC4 LINE L1 7335 7793 -249 324 263 35 76 chr10 36451013 36451302 -109137986 + L1MC4 LINE L1 7759 8035 -7 1478 164 52 45 chr10 36451304 36451591 -109137697 + AluJo SINE Alu 1 289 -23 2315 107 85 8 chr10 36452088 36452610 -109136678 - MER51A LTR ERV1 -1 633 1 456 104 0 0 chr10 36453703 36453770 -109135518 + (TA)n Simple_repeat Simple_repeat 2 68 0 1602 190 24 10 chr10 36455151 36455441 -109133847 + AluJo SINE Alu 3 296 -16 2144 92 4 0 chr10 36456139 36456444 -109132844 - AluY SINE Alu 0 306 1 2170 111 3 3 chr10 36456508 36456806 -109132482 - AluSg SINE Alu -12 298 1 261 98 0 0 chr10 36457752 36457793 -109131495 + (CA)n Simple_repeat Simple_repeat 2 42 0 3656 104 7 59 chr10 36459164 36459463 -109129825 + LTR26B LTR ERV1 2 260 -271 2243 126 7 0 chr10 36459463 36459773 -109129515 - AluSx SINE Alu 0 312 1 3656 104 7 59 chr10 36459773 36460032 -109129256 + LTR26B LTR ERV1 260 531 0 319 319 151 7 chr10 36460343 36460564 -109128724 - MIR3 SINE MIR -10 252 4 243 310 184 0 chr10 36462225 36462312 -109126976 + L2 LINE L2 3168 3270 -2 23 54 0 0 chr10 36462314 36462351 -109126937 + AT_rich Low_complexity Low_complexity 1 37 0 218 296 19 0 chr10 36462439 36462493 -109126795 + L2 LINE L2 3217 3271 -1 5039 99 19 1 chr10 36463418 36464094 -109125194 + L1PA8 LINE L1 5482 6169 -3 1457 216 83 22 chr10 36464191 36464435 -109124853 - MER110A LTR ERV1 0 468 188 1981 204 91 66 chr10 36464435 36465042 -109124246 - LTR26E LTR ERV1 0 622 1 1457 216 83 22 chr10 36465042 36465204 -109124084 - MER110A LTR ERV1 -280 188 37 2336 93 0 10 chr10 36465359 36465669 -109123619 - AluY SINE Alu -4 307 1 904 181 91 19 chr10 36465889 36466099 -109123189 + MER110A LTR ERV1 1 225 -243 4791 49 3 3 chr10 36466295 36466863 -109122425 + L1PA8 LINE L1 5605 6172 0 509 289 66 16 chr10 36466922 36467164 -109122124 - MER41B LTR ERV1 -205 430 177 797 248 49 0 chr10 36467278 36467504 -109121784 + MER110A LTR ERV1 232 468 0 2394 64 0 0 chr10 36469204 36469511 -109119777 + AluY SINE Alu 1 307 0 21 0 0 0 chr10 36469813 36469834 -109119454 + AT_rich Low_complexity Low_complexity 1 21 0 260 287 28 19 chr10 36470692 36470800 -109118488 - MER110A LTR ERV1 -18 450 342 254 234 69 150 chr10 36470807 36470876 -109118412 - LTR48B LTR ERV1 -11 633 560 2173 129 3 0 chr10 36470876 36471186 -109118102 + AluSx SINE Alu 1 311 -1 1628 118 51 0 chr10 36471187 36471424 -109117864 + AluSp SINE Alu 34 282 -31 207 0 0 0 chr10 36471427 36471450 -109117838 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 254 234 69 150 chr10 36471450 36471563 -109117725 - LTR48B LTR ERV1 -86 558 471 2507 74 0 0 chr10 36471563 36471862 -109117426 - AluY SINE Alu -12 299 1 254 234 69 150 chr10 36471862 36471946 -109117342 - LTR48B LTR ERV1 -173 471 382 225 274 16 65 chr10 36472025 36472149 -109117139 - LTR48B LTR ERV1 -408 236 119 997 213 90 60 chr10 36472150 36472483 -109116805 - MER110A LTR ERV1 -125 343 1 2207 101 14 3 chr10 36472927 36473224 -109116064 + AluSp SINE Alu 1 300 -13 1813 207 114 51 chr10 36473582 36474319 -109114969 + LTR1B LTR ERV1 1 772 -13 1651 177 0 27 chr10 36474608 36474908 -109114380 + AluJb SINE Alu 1 292 -20 388 271 0 5 chr10 36475370 36475486 -109113802 + MIR SINE MIR 30 143 -65 336 24 0 0 chr10 36475654 36475695 -109113593 + (TG)n Simple_repeat Simple_repeat 2 42 0 2536 94 64 0 chr10 36476081 36476423 -109112865 - THE1B LTR MaLR 0 364 1 1950 154 0 3 chr10 36476451 36476770 -109112518 - AluSx SINE Alu 0 318 1 21 0 0 0 chr10 36476770 36476791 -109112497 + AT_rich Low_complexity Low_complexity 1 21 0 1374 165 0 25 chr10 36476800 36477036 -109112252 - AluJo SINE Alu -20 292 63 321 294 0 22 chr10 36477037 36477053 -109112235 - L1MC4 LINE L1 -1339 6703 6688 315 49 0 0 chr10 36477053 36477094 -109112194 + (CA)n Simple_repeat Simple_repeat 2 42 0 321 294 0 22 chr10 36477094 36477169 -109112119 - L1MC4 LINE L1 -1354 6688 6614 * 333 300 0 0 chr10 36477165 36477255 -109112033 + L1MC4 LINE L1 6614 6703 -1339 2202 106 0 0 chr10 36477261 36477568 -109111720 - AluSq SINE Alu 0 307 1 1228 181 0 0 chr10 36477568 36477767 -109111521 - AluJb SINE Alu -109 203 5 1553 122 30 0 chr10 36477775 36478012 -109111276 - L1PA16 LINE L1 -16 6150 5907 2287 123 0 0 chr10 36478896 36479197 -109110091 + AluSx SINE Alu 1 301 -11 270 0 0 0 chr10 36479197 36479227 -109110061 + (TC)n Simple_repeat Simple_repeat 2 31 0 243 0 0 0 chr10 36479226 36479253 -109110035 + (TA)n Simple_repeat Simple_repeat 1 27 0 * 187 304 43 0 chr10 36479379 36479448 -109109840 - MIR SINE MIR -74 188 117 2394 133 34 11 chr10 36479825 36480179 -109109109 - THE1B LTR MaLR 0 364 3 12886 80 4 4 chr10 36480183 36481762 -109107526 - THE1B-int LTR MaLR -2 1578 1 2449 130 30 22 chr10 36481762 36482123 -109107165 - THE1B LTR MaLR 0 364 1 493 169 0 0 chr10 36483660 36483737 -109105551 + L1 LINE L1 2662 2738 -3408 841 177 41 0 chr10 36483738 36483885 -109105403 + MSTD LTR MaLR 1 153 -243 27276 40 2 0 chr10 36483888 36484586 -109104702 - L1PA4 LINE L1 0 6155 5460 2207 101 7 3 chr10 36484586 36484883 -109104405 - AluY SINE Alu -13 298 1 27276 40 2 0 chr10 36484883 36488142 -109101146 - L1PA4 LINE L1 -695 5460 2224 15764 69 3 0 chr10 36488142 36490131 -109099157 - L1P LINE L1 -4006 2140 145 1315 170 26 9 chr10 36490132 36490361 -109098927 + MSTD LTR MaLR 164 396 0 3339 186 60 17 chr10 36490361 36491204 -109098084 + L1 LINE L1 2735 3614 -2532 1436 193 33 36 chr10 36491200 36491537 -109097751 + L1MA7 LINE L1 5953 6288 -3 * 216 317 143 50 chr10 36491586 36491845 -109097443 + L2 LINE L2 2974 3256 -16 1986 101 10 57 chr10 36492478 36492815 -109096473 - AluSx SINE Alu 0 323 1 1760 188 26 8 chr10 36492962 36493417 -109095871 - LTR53 LTR ERVL -1 518 9 1355 103 73 90 chr10 36493950 36494063 -109095225 - MER30 DNA MER1_type 0 230 117 1990 147 13 0 chr10 36494063 36494362 -109094926 - AluSx SINE Alu -9 303 1 1355 103 73 90 chr10 36494362 36494482 -109094806 - MER30 DNA MER1_type -113 117 1 309 252 165 0 chr10 36495745 36495848 -109093440 - MER94 DNA DNA 0 134 15 2367 85 0 3 chr10 36496681 36496976 -109092312 - AluSc SINE Alu -15 294 1 476 319 140 36 chr10 36498292 36498649 -109090639 + MLT1I LTR MaLR 1 394 -15 454 287 20 0 chr10 36499977 36500078 -109089210 + L2 LINE L2 3154 3256 -16 200 268 0 0 chr10 36500044 36500085 -109089203 + MIR SINE MIR 219 259 -3 * 2250 115 0 6 chr10 36500343 36500656 -109088632 - AluSx SINE Alu -1 311 1 405 0 0 0 chr10 36501243 36501288 -109088000 + (CA)n Simple_repeat Simple_repeat 1 45 0 400 305 145 48 chr10 36501295 36501599 -109087689 + L2 LINE L2 2745 3090 -223 1837 117 84 47 chr10 36501599 36501897 -109087391 - AluSg SINE Alu 0 310 2 400 305 145 48 chr10 36501897 36501960 -109087328 + L2 LINE L2 3090 3145 -168 280 171 0 29 chr10 36501966 36502036 -109087252 + CT-rich Low_complexity Low_complexity 2 69 0 1633 233 71 9 chr10 36502301 36502739 -109086549 - MLT1C LTR MaLR 0 467 3 1846 158 10 10 chr10 36502892 36503203 -109086085 + AluJo SINE Alu 1 311 -1 250 376 147 6 chr10 36504247 36504404 -109084884 + L3 LINE CR1 1396 1574 -3 1788 160 28 7 chr10 36504721 36505009 -109084279 + AluJo SINE Alu 5 298 -14 270 323 69 15 chr10 36506706 36506836 -109082452 + MER5B DNA MER1_type 7 143 -35 847 168 44 0 chr10 36507200 36507389 -109081899 + AluJb SINE Alu 141 335 0 1998 94 94 7 chr10 36508461 36508749 -109080539 + AluSq SINE Alu 1 313 0 2152 118 3 0 chr10 36510621 36510918 -109078370 + AluSq SINE Alu 1 298 -15 180 0 0 0 chr10 36510924 36510944 -109078344 + (CAA)n Simple_repeat Simple_repeat 2 21 0 418 225 7 196 chr10 36511114 36511283 -109078005 + MIR SINE MIR 18 117 -145 840 125 8 0 chr10 36511283 36511411 -109077877 - L1MA5A LINE L1 -3 6294 6166 418 225 7 196 chr10 36511411 36511517 -109077771 + MIR SINE MIR 117 241 -21 34 84 0 0 chr10 36511900 36511983 -109077305 + AT_rich Low_complexity Low_complexity 1 83 0 2304 106 0 3 chr10 36512132 36512443 -109076845 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr10 36514151 36514172 -109075116 + AT_rich Low_complexity Low_complexity 1 21 0 610 193 62 35 chr10 36514175 36514320 -109074968 - L1MC1 LINE L1 0 6333 6185 1051 48 42 6 chr10 36515680 36515845 -109073443 + (TTTC)n Simple_repeat Simple_repeat 2 172 0 783 138 0 9 chr10 36515845 36515954 -109073334 - FLAM_C SINE Alu -22 121 14 2056 155 5 39 chr10 36516582 36516969 -109072319 - MSTA LTR MaLR 0 428 55 650 131 0 10 chr10 36516970 36517069 -109072219 + MER4A LTR ERV1 1 98 -566 1711 117 177 76 chr10 36517069 36517436 -109071852 + MER4A LTR ERV1 261 664 0 392 121 17 0 chr10 36517436 36517491 -109071797 - MSTA LTR MaLR -370 56 1 1345 90 51 11 chr10 36517762 36518073 -109071215 - THE1C LTR MaLR 0 375 1 308 306 70 25 chr10 36518101 36518385 -109070903 - L2 LINE L2 -556 2758 2462 2104 159 22 75 chr10 36518567 36518983 -109070305 - MSTD LTR MaLR 0 396 3 430 228 0 22 chr10 36519038 36519130 -109070158 - Tigger5 DNA MER2_type 0 2323 2234 263 186 0 0 chr10 36519137 36519180 -109070108 - Tigger5 DNA MER2_type -2268 55 13 368 189 14 27 chr10 36519180 36519254 -109070034 - Tigger5 DNA MER2_type 0 2323 2251 320 196 0 18 chr10 36519222 36519278 -109070010 - Tigger5 DNA MER2_type -2268 55 1 * 817 192 51 75 chr10 36521550 36521622 -109067666 - MER3 DNA MER1_type 0 209 137 1694 173 3 7 chr10 36521622 36521906 -109067382 + AluJb SINE Alu 10 292 -20 817 192 51 75 chr10 36521906 36522047 -109067241 - MER3 DNA MER1_type -72 137 1 2091 109 20 14 chr10 36522264 36522558 -109066730 + AluSx SINE Alu 1 296 -16 2346 122 48 20 chr10 36522965 36523317 -109065971 + THE1B LTR MaLR 3 364 0 1463 168 35 48 chr10 36523343 36523658 -109065630 - AluJb SINE Alu 0 312 2 354 140 18 0 chr10 36524762 36524819 -109064469 - FLAM SINE Alu -8 125 68 802 203 0 0 chr10 36524820 36524948 -109064340 + AluJ SINE Alu 2 129 -183 253 291 23 0 chr10 36524948 36525034 -109064254 - L1MC4 LINE L1 -1342 6700 6613 311 301 0 0 chr10 36525062 36525145 -109064143 - L1MC4 LINE L1 -1340 6702 6620 2215 72 4 4 chr10 36525148 36525426 -109063862 - AluSp SINE Alu -34 279 2 939 134 82 29 chr10 36525472 36525643 -109063645 + AluJ SINE Alu 132 311 -1 484 153 0 0 chr10 36525651 36525723 -109063565 - AluJ/FLAM SINE Alu -232 80 9 2371 84 7 0 chr10 36526770 36527066 -109062222 - AluSx SINE Alu -14 298 1 1752 171 3 35 chr10 36527295 36527605 -109061683 + AluJb SINE Alu 1 300 -12 285 148 2 0 chr10 36527606 36527660 -109061628 + FLAM SINE Alu 82 129 -4 236 125 62 21 chr10 36528191 36528239 -109061049 - MER5A DNA MER1_type -62 127 78 1182 74 0 0 chr10 36528242 36528390 -109060898 - THE1B LTR MaLR -214 150 3 2630 105 14 14 chr10 36528818 36529180 -109060108 - THE1B LTR MaLR -2 362 1 252 131 77 12 chr10 36530657 36530825 -109058463 + (TA)n Simple_repeat Simple_repeat 2 180 0 247 35 0 0 chr10 36530884 36530913 -109058375 - Alu SINE Alu -195 107 79 186 107 54 0 chr10 36530963 36531019 -109058269 + (TA)n Simple_repeat Simple_repeat 1 59 0 249 61 41 20 chr10 36531038 36531087 -109058201 + (TA)n Simple_repeat Simple_repeat 2 51 0 247 35 0 0 chr10 36531102 36531131 -109058157 - Alu SINE Alu -195 107 79 414 113 0 0 chr10 36531193 36531246 -109058042 - AluJ/FLAM SINE Alu -249 63 11 192 259 293 26 chr10 36531541 36531657 -109057631 + MER5B DNA MER1_type 32 178 0 2619 154 18 37 chr10 36531865 36532260 -109057028 + MSTA LTR MaLR 1 389 -39 2162 141 0 0 chr10 36532260 36532572 -109056716 - AluSx SINE Alu 0 312 1 2619 154 18 37 chr10 36532572 36532612 -109056676 + MSTA LTR MaLR 389 428 0 900 152 0 0 chr10 36532822 36532960 -109056328 - FRAM SINE Alu -7 169 32 188 325 90 54 chr10 36533278 36533444 -109055844 + L2 LINE L2 2856 3027 -245 2751 165 6 30 chr10 36534721 36534938 -109054350 + LOR1b LTR ERV1 1 222 -239 1974 124 0 4 chr10 36534938 36535213 -109054075 - AluSx SINE Alu -10 302 29 2751 165 6 30 chr10 36535213 36535467 -109053821 + LOR1b LTR ERV1 222 461 0 779 205 87 19 chr10 36538029 36538190 -109051098 + FAM SINE Alu 1 172 -3 1266 116 0 0 chr10 36538190 36538363 -109050925 + L1MA1 LINE L1 5588 5760 -544 239 114 45 23 chr10 36538399 36538437 -109050851 - L1MA1 LINE L1 -545 5757 5718 4312 64 4 13 chr10 36538437 36538986 -109050302 + L1MA1 LINE L1 5759 6302 0 391 245 10 10 chr10 36539189 36539287 -109050001 + MER91B DNA MER1_type 32 129 -61 21 0 0 0 chr10 36539388 36539409 -109049879 + AT_rich Low_complexity Low_complexity 1 21 0 242 262 167 24 chr10 36539695 36539779 -109049509 + MIR3 SINE MIR 82 177 -31 3127 217 33 33 chr10 36539941 36540639 -109048649 - L1ME1 LINE L1 -23 6537 5836 2286 137 30 35 chr10 36540639 36541005 -109048283 - THE1B LTR MaLR 0 364 1 3127 217 33 33 chr10 36541005 36541651 -109047637 - L1ME1 LINE L1 -724 5836 5192 1337 239 87 9 chr10 36541640 36542068 -109047220 - L1ME1 LINE L1 -3626 2914 2455 * 432 277 10 0 chr10 36542109 36542210 -109047078 - L2 LINE L2 -36 3277 3176 3250 233 128 62 chr10 36542278 36543431 -109045857 - L1ME1 LINE L1 -5172 1371 142 414 256 31 0 chr10 36543433 36543562 -109045726 - L1MEc LINE L1 -4243 2153 2021 490 116 0 45 chr10 36543562 36543674 -109045614 + (TA)n Simple_repeat Simple_repeat 2 108 0 2269 76 0 7 chr10 36543674 36543986 -109045302 - AluSp SINE Alu 0 313 1 1981 254 67 24 chr10 36543986 36545791 -109043497 - L1MEc LINE L1 -4379 2017 113 * 4933 131 46 50 chr10 36545773 36546093 -109043195 - L1PA16 LINE L1 -3 6163 5843 1949 119 48 7 chr10 36546093 36546386 -109042902 + AluSq SINE Alu 1 305 -8 4933 131 46 50 chr10 36546386 36546638 -109042650 - L1PA16 LINE L1 -323 5843 5592 2139 116 7 0 chr10 36546638 36546930 -109042358 - AluSg SINE Alu -16 294 1 4933 131 46 50 chr10 36546930 36547264 -109042024 - L1PA16 LINE L1 -574 5592 5259 3029 84 17 0 chr10 36547238 36547643 -109041645 - L1PA10 LINE L1 -5 6163 5752 * 667 194 0 0 chr10 36547643 36547777 -109041511 + L1 LINE L1 5179 5312 -834 205 262 8 87 chr10 36547809 36547935 -109041353 - L2 LINE L2 -729 2585 2470 4651 218 14 8 chr10 36547991 36549027 -109040261 - L1PA16 LINE L1 -860 5286 4244 3786 139 4 0 chr10 36549893 36550418 -109038870 - MER1A DNA MER1_type 0 527 1 2121 124 0 3 chr10 36550486 36550776 -109038512 + AluSx SINE Alu 1 289 -23 1043 308 35 20 chr10 36551535 36551986 -109037302 + L1MC4a LINE L1 5533 5990 -1818 1701 180 31 0 chr10 36551996 36552285 -109037003 + AluJo SINE Alu 1 298 -14 31 68 0 0 chr10 36552402 36552461 -109036827 + AT_rich Low_complexity Low_complexity 1 59 0 1461 161 43 8 chr10 36553373 36553628 -109035660 + AluJb SINE Alu 28 291 -21 2579 188 128 67 chr10 36554422 36555200 -109034088 - LTR1B LTR ERV1 0 826 1 2196 249 4 8 chr10 36555492 36555977 -109033311 - MER21B LTR ERV1 -369 494 12 851 184 168 26 chr10 36556083 36556273 -109033015 - MER21B-int LTR ERV1 -52 4139 3923 1047 240 80 47 chr10 36556273 36556635 -109032653 - LTR40c LTR ERVL -58 407 34 3315 155 13 35 chr10 36556701 36557107 -109032181 - LTR26B LTR ERV1 0 531 135 2187 116 0 7 chr10 36557107 36557429 -109031859 + AluSq SINE Alu 1 320 0 3315 155 13 35 chr10 36557429 36557562 -109031726 - LTR26B LTR ERV1 -396 135 1 506 254 169 5 chr10 36557676 36557865 -109031423 - MIR SINE MIR -17 245 26 4770 79 55 43 chr10 36558164 36558363 -109030925 + L1MA2 LINE L1 5573 5768 -536 2318 134 61 3 chr10 36558363 36558707 -109030581 + THE1B LTR MaLR 1 364 0 4770 79 55 43 chr10 36558707 36559230 -109030058 + L1MA2 LINE L1 5768 6304 0 1878 207 158 58 chr10 36559846 36560563 -109028725 + LTR1B LTR ERV1 1 980 -40 267 0 29 0 chr10 36560968 36561002 -109028286 + (TTTTA)n Simple_repeat Simple_repeat 1 70 0 1480 154 61 65 chr10 36561002 36561165 -109028123 - AluJo SINE Alu -1 315 119 186 103 0 0 chr10 36561165 36561194 -109028094 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 1480 154 61 65 chr10 36561194 36561309 -109027979 - AluJo SINE Alu -197 119 5 2027 128 3 3 chr10 36561627 36561915 -109027373 - AluSx SINE Alu -24 288 1 21 0 0 0 chr10 36562235 36562256 -109027032 + AT_rich Low_complexity Low_complexity 1 21 0 580 246 31 52 chr10 36562551 36562742 -109026546 + MIR3 SINE MIR 19 205 -3 2813 130 9 7 chr10 36563077 36563508 -109025780 + L1MA3 LINE L1 5874 6305 0 1155 203 60 18 chr10 36566158 36566437 -109022851 - MER58B DNA MER1_type -9 332 1 2343 163 69 12 chr10 36566472 36566877 -109022411 - MSTC LTR MaLR 0 428 1 582 54 0 0 chr10 36567508 36567582 -109021706 + (TTCC)n Simple_repeat Simple_repeat 3 76 0 1891 138 22 0 chr10 36567585 36567860 -109021428 - AluSq SINE Alu -32 281 1 184 333 120 19 chr10 36568013 36568121 -109021167 - MER5A DNA MER1_type -31 158 40 370 268 49 32 chr10 36568261 36568372 -109020916 + MIR SINE MIR 9 124 -138 4812 65 2 0 chr10 36568372 36568925 -109020363 + MER41A LTR ERV1 1 554 0 370 268 49 32 chr10 36568925 36568936 -109020352 + MIR SINE MIR 124 133 -129 571 130 30 0 chr10 36569576 36569669 -109019619 - L1PB1 LINE L1 -694 5457 5359 5189 97 21 8 chr10 36569669 36570024 -109019264 + L1PB1 LINE L1 5429 5778 -373 363 44 0 0 chr10 36570024 36570069 -109019219 + (CA)n Simple_repeat Simple_repeat 2 46 0 5189 97 21 8 chr10 36570069 36570422 -109018866 + L1PB1 LINE L1 5778 6147 -4 571 130 30 0 chr10 36570422 36570467 -109018821 - L1P5 LINE L1 -792 5359 5317 763 172 29 77 chr10 36570571 36570780 -109018508 + MER106A DNA MER1_type 35 233 -3 2162 117 0 10 chr10 36572495 36572794 -109016494 + AluSg SINE Alu 1 296 -14 234 0 0 0 chr10 36572978 36573004 -109016284 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 648 242 12 36 chr10 36576331 36576496 -109012792 - MER45A DNA AcHobo -2 176 16 2315 141 21 50 chr10 36576982 36577228 -109012060 - L1MA4A LINE L1 -7 6296 6065 1688 149 0 57 chr10 36577228 36577529 -109011759 + AluJo SINE Alu 11 294 -18 2315 141 21 50 chr10 36577529 36577702 -109011586 - L1MA4A LINE L1 -238 6065 5889 505 182 30 20 chr10 36577955 36578054 -109011234 + LTR24B LTR ERV1 4 103 -473 1572 55 92 37 chr10 36578110 36578328 -109010960 + MER30 DNA MER1_type 1 230 0 672 279 46 14 chr10 36578367 36578682 -109010606 + LTR24B LTR ERV1 145 569 0 2156 136 0 0 chr10 36579308 36579610 -109009678 + AluSx SINE Alu 1 302 -10 253 307 36 44 chr10 36580270 36580407 -109008881 + L3 LINE CR1 1416 1551 -26 215 196 39 0 chr10 36580410 36580461 -109008827 + GA-rich Low_complexity Low_complexity 2 54 0 26 30 0 0 chr10 36580659 36580692 -109008596 + AT_rich Low_complexity Low_complexity 1 33 0 717 275 48 70 chr10 36581144 36581515 -109007773 + L1ME4a LINE L1 5560 5922 -199 248 324 157 0 chr10 36581574 36581682 -109007606 + L2 LINE L2 3148 3272 0 3440 110 46 24 chr10 36581835 36582335 -109006953 - MER9 LTR ERVK 0 511 1 27 0 0 0 chr10 36582869 36582896 -109006392 + AT_rich Low_complexity Low_complexity 1 27 0 3007 83 3 0 chr10 36583133 36583496 -109005792 - THE1B LTR MaLR 0 364 1 237 222 74 49 chr10 36584675 36584756 -109004532 + MIR SINE MIR 19 101 -107 696 266 47 10 chr10 36584803 36584995 -109004293 + MIR SINE MIR 64 262 0 231 301 60 24 chr10 36585016 36585099 -109004189 + MIR3 SINE MIR 114 199 -9 1560 180 54 0 chr10 36585138 36585293 -109003995 - AluJo SINE Alu -19 293 148 189 0 0 0 chr10 36585293 36585314 -109003974 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1560 180 54 0 chr10 36585314 36585436 -109003852 - AluJo SINE Alu -164 148 1 2054 123 7 14 chr10 36585520 36585813 -109003475 + AluSx SINE Alu 1 291 -21 813 207 86 94 chr10 36586627 36586942 -109002346 - L2 LINE L2 -239 3074 2758 1046 219 13 26 chr10 36586951 36587030 -109002258 + AluJo SINE Alu 61 140 -172 2115 111 4 0 chr10 36587030 36587332 -109001956 + AluSc SINE Alu 1 303 0 1046 219 13 26 chr10 36587332 36587484 -109001804 + AluJo SINE Alu 140 290 -22 775 143 0 0 chr10 36587510 36587615 -109001673 - AluJo SINE Alu -44 268 164 751 173 0 0 chr10 36587623 36587733 -109001555 - AluJo SINE Alu -201 111 2 2234 287 95 35 chr10 36587740 36588902 -109000386 - L2 LINE L2 -568 2746 1516 2387 74 7 3 chr10 36589676 36589972 -108999316 + AluY SINE Alu 1 297 -14 2431 103 0 0 chr10 36590015 36590327 -108998961 - AluSq SINE Alu -1 312 1 561 297 73 82 chr10 36591056 36591631 -108997657 - L1ME4a LINE L1 -223 5898 5329 487 303 123 23 chr10 36592180 36592530 -108996758 - MLT1I LTR MaLR 0 409 25 6035 102 9 14 chr10 36592563 36593451 -108995837 - L1PB1 LINE L1 -1 6150 5267 227 384 42 5 chr10 36593816 36594032 -108995256 - L1ME4a LINE L1 -1178 4968 4745 2129 125 3 10 chr10 36594069 36594374 -108994914 - AluSx SINE Alu -9 303 1 364 349 99 54 chr10 36594629 36595032 -108994256 - L2 LINE L2 -229 3043 2627 1762 91 9 0 chr10 36595034 36595264 -108994024 - Charlie3 DNA MER1_type -5 2705 2474 1565 119 0 0 chr10 36595349 36595551 -108993737 - AluSg/x SINE Alu -16 294 93 186 43 0 0 chr10 36595705 36595728 -108993560 + (TC)n Simple_repeat Simple_repeat 2 24 0 2191 118 0 3 chr10 36595728 36596024 -108993264 - AluSx SINE Alu -17 295 1 409 265 60 13 chr10 36596215 36596366 -108992922 + MER103 DNA DNA 3 160 -6 14713 113 72 34 chr10 36596367 36597262 -108992026 - Tigger1 DNA MER2_type 0 2418 1559 2519 57 3 0 chr10 36597262 36597563 -108991725 - AluY SINE Alu -9 302 1 14713 113 72 34 chr10 36597563 36598406 -108990882 - Tigger1 DNA MER2_type -859 1559 750 2370 86 0 7 chr10 36598406 36598710 -108990578 - AluY SINE Alu -9 302 1 14713 113 72 34 chr10 36598710 36599037 -108990251 - Tigger1 DNA MER2_type -1668 750 437 2069 121 7 0 chr10 36599037 36599326 -108989962 + AluSx SINE Alu 5 295 -17 14713 113 72 34 chr10 36599326 36599585 -108989703 - Tigger1 DNA MER2_type -1981 437 3 729 198 0 0 chr10 36599611 36599732 -108989556 + FRAM SINE Alu 46 166 -10 210 316 44 21 chr10 36601013 36601113 -108988175 - MIR SINE MIR -63 145 45 1885 173 0 3 chr10 36601289 36601601 -108987687 + AluSx SINE Alu 1 311 -1 21 0 0 0 chr10 36602163 36602184 -108987104 + AT_rich Low_complexity Low_complexity 1 21 0 860 86 13 26 chr10 36602901 36603052 -108986236 + (TTTC)n Simple_repeat Simple_repeat 2 150 0 243 276 0 0 chr10 36603565 36603623 -108985665 + L2 LINE L2 3247 3304 -9 1435 226 77 24 chr10 36603750 36604245 -108985043 - L1ME4a LINE L1 -3 6118 5598 2118 134 0 0 chr10 36604440 36604738 -108984550 + AluSx SINE Alu 1 298 -14 190 256 37 37 chr10 36604754 36604836 -108984452 + MIR SINE MIR 31 112 -150 894 276 105 44 chr10 36604874 36605099 -108984189 + MLT1J LTR MaLR 5 215 -296 2629 120 38 31 chr10 36605099 36605524 -108983764 + MSTA LTR MaLR 1 428 0 894 276 105 44 chr10 36605524 36605773 -108983515 + MLT1J LTR MaLR 215 508 -3 180 0 0 0 chr10 36606754 36606774 -108982514 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2104 131 0 0 chr10 36606777 36607060 -108982228 - AluSq SINE Alu -30 283 1 297 324 122 19 chr10 36608042 36608255 -108981033 + L2 LINE L2 1721 1955 -1359 3961 186 19 23 chr10 36608317 36609109 -108980179 - L1MB8 LINE L1 -6 6172 5384 864 258 22 0 chr10 36609111 36609386 -108979902 - L1MB8 LINE L1 -844 5302 5022 245 241 0 0 chr10 36609436 36609494 -108979794 + L1M4 LINE L1 5022 5079 -1067 400 210 0 0 chr10 36609498 36609579 -108979709 - L1MB8 LINE L1 -1125 5021 4941 1474 59 21 0 chr10 36610000 36610186 -108979102 + L1MA1 LINE L1 6112 6301 -1 247 327 39 10 chr10 36610511 36610615 -108978673 - L2 LINE L2 -1 3312 3206 1489 193 37 20 chr10 36612442 36612615 -108976673 - AluJo SINE Alu -12 300 118 208 0 0 59 chr10 36612615 36612649 -108976639 + (TTA)n Simple_repeat Simple_repeat 2 33 0 1489 193 37 20 chr10 36612649 36612770 -108976518 - AluJo SINE Alu -194 118 1 195 129 0 0 chr10 36617480 36617511 -108971777 + (TG)n Simple_repeat Simple_repeat 2 32 0 4369 148 91 3 chr10 36618486 36619245 -108970043 - LTR1B LTR ERV1 0 826 1 1978 126 0 0 chr10 36621454 36621724 -108967564 - AluSg SINE Alu -2 308 39 1926 165 0 16 chr10 36621738 36622053 -108967235 - AluJo SINE Alu -2 310 1 2423 92 0 7 chr10 36623285 36623589 -108965699 - AluSg SINE Alu -8 302 1 2557 69 0 0 chr10 36623615 36623919 -108965369 + AluY SINE Alu 1 304 -7 355 305 86 13 chr10 36624001 36624152 -108965136 + MIR SINE MIR 77 238 -24 3921 57 38 6 chr10 36625182 36625687 -108963601 - L1PA8 LINE L1 0 6172 5652 369 109 0 0 chr10 36625792 36625847 -108963441 + (CA)n Simple_repeat Simple_repeat 2 56 0 324 173 49 0 chr10 36626155 36626236 -108963052 + L1MB4 LINE L1 6095 6179 -1 3898 192 31 14 chr10 36626366 36627136 -108962152 - LTR39 LTR ERV1 0 783 1 666 214 0 7 chr10 36627528 36627803 -108961485 + (TCCA)n Simple_repeat Simple_repeat 1 272 0 1401 184 74 13 chr10 36627832 36628131 -108961157 + LTR52 LTR ERVL 102 418 -3 397 307 21 37 chr10 36628624 36628813 -108960475 - MLT1K LTR MaLR 0 588 403 841 181 0 0 chr10 36629091 36629224 -108960064 + FLAM_A SINE Alu 1 133 0 2737 114 13 37 chr10 36629728 36629944 -108959344 + L1MA4A LINE L1 5854 6074 -229 2244 129 0 0 chr10 36629944 36630253 -108959035 - AluSx SINE Alu -3 309 1 2737 114 13 37 chr10 36630253 36630490 -108958798 + L1MA4A LINE L1 6074 6296 -7 1372 168 6 128 chr10 36630512 36630839 -108958449 + AluJb SINE Alu 1 287 -15 2442 118 34 34 chr10 36632492 36632692 -108956596 - L1MA8 LINE L1 -5 6286 6087 2366 86 7 0 chr10 36632692 36632993 -108956295 - AluSx SINE Alu -5 307 5 2442 118 34 34 chr10 36632993 36633231 -108956057 - L1MA8 LINE L1 -203 6088 5848 2165 136 33 25 chr10 36633297 36633658 -108955630 - THE1B LTR MaLR 0 364 1 307 163 5 0 chr10 36633831 36633892 -108955396 + MIR SINE MIR 97 160 -48 2342 89 0 3 chr10 36633979 36634283 -108955005 + AluY SINE Alu 1 303 -8 2658 190 17 0 chr10 36634598 36635071 -108954217 + MLT2B1 LTR ERVL 1 481 -39 1064 160 5 5 chr10 36635071 36635258 -108954030 + MLT1A1 LTR MaLR 1 187 -178 3909 124 71 57 chr10 36635259 36635408 -108953880 - MER50 LTR ERV1 -23 711 566 1424 202 10 24 chr10 36635408 36635546 -108953742 + AluJb SINE Alu 1 139 -175 429 36 0 0 chr10 36635546 36635601 -108953687 + (TAGA)n Simple_repeat Simple_repeat 4 58 0 1424 202 10 24 chr10 36635601 36635780 -108953508 + AluJb SINE Alu 139 314 0 3909 124 71 57 chr10 36635780 36636328 -108952960 - MER50 LTR ERV1 -168 566 1 987 192 16 22 chr10 36636329 36636511 -108952777 + MLT1A1 LTR MaLR 185 365 0 187 205 27 152 chr10 36636586 36636646 -108952642 + MIR SINE MIR 42 83 -179 2012 139 14 0 chr10 36636646 36636941 -108952347 - AluSg SINE Alu -11 299 1 187 205 27 152 chr10 36636941 36636992 -108952296 + MIR SINE MIR 83 139 -123 2132 125 6 10 chr10 36637003 36637315 -108951973 - AluSq SINE Alu -2 311 1 2276 214 91 12 chr10 36638951 36639548 -108949740 - LTR48B LTR ERV1 0 644 1 246 279 15 15 chr10 36640129 36640197 -108949091 + tRNA-Ile-ATT tRNA tRNA 5 72 -5 258 32 0 0 chr10 36640821 36640852 -108948436 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 2011 151 0 0 chr10 36640855 36641139 -108948149 - AluSx SINE Alu -28 284 1 1812 169 0 10 chr10 36641179 36641480 -108947808 - AluJb SINE Alu -14 298 1 6684 55 0 81 chr10 36641523 36642955 -108946333 + L1PA7 LINE L1 4800 6153 -1 1563 147 74 53 chr10 36644252 36644391 -108944897 + LTR8A LTR ERV1 1 136 -591 413 76 15 0 chr10 36644391 36644457 -108944831 + (TA)n Simple_repeat Simple_repeat 2 68 0 2046 140 7 0 chr10 36644457 36644742 -108944546 - AluSx SINE Alu -23 289 3 2168 124 0 3 chr10 36644748 36645046 -108944242 - AluSq SINE Alu -16 297 1 1563 147 74 53 chr10 36645046 36645532 -108943756 + LTR8A LTR ERV1 140 727 0 25 31 0 0 chr10 36645704 36645736 -108943552 + AT_rich Low_complexity Low_complexity 1 32 0 211 357 24 0 chr10 36645756 36645840 -108943448 + MIR3 SINE MIR 114 199 -9 2356 106 0 6 chr10 36646048 36646359 -108942929 - AluSx SINE Alu -3 309 1 401 149 0 0 chr10 36646367 36646434 -108942854 - Alu SINE Alu -2 309 243 1067 139 0 30 chr10 36646446 36646811 -108942477 + (GAAA)n Simple_repeat Simple_repeat 2 355 0 2059 148 0 7 chr10 36646886 36647191 -108942097 + AluJb SINE Alu 1 303 -9 5791 117 16 27 chr10 36648047 36648960 -108940328 + MER4D LTR ERV1 1 903 0 2404 99 0 3 chr10 36649010 36649322 -108939966 + AluSq SINE Alu 1 311 -2 391 227 6 6 chr10 36649632 36649808 -108939480 + CT-rich Low_complexity Low_complexity 2 177 0 255 305 0 0 chr10 36649809 36649868 -108939420 + polypyrimidine Low_complexity Low_complexity 4 62 0 570 234 0 0 chr10 36649869 36650044 -108939244 + CT-rich Low_complexity Low_complexity 2 176 0 1670 193 10 7 chr10 36650604 36650894 -108938394 - AluJo SINE Alu -21 291 1 680 240 72 87 chr10 36651288 36651634 -108937654 + MER102b DNA MER1_type 1 341 0 1315 162 121 62 chr10 36651728 36652000 -108937288 + AluJo SINE Alu 5 292 -20 299 290 130 0 chr10 36652287 36652387 -108936901 - MER117 DNA MER1_type -51 146 34 2424 90 0 0 chr10 36653411 36653710 -108935578 + AluSq SINE Alu 1 299 -14 1884 94 0 42 chr10 36654076 36654199 -108935089 + L1MA1 LINE L1 6027 6154 -148 1523 96 50 5 chr10 36654199 36654418 -108934870 + MER30 DNA MER1_type 2 230 0 1884 94 0 42 chr10 36654418 36654582 -108934706 + L1MA1 LINE L1 6154 6302 0 27 0 0 0 chr10 36654582 36654609 -108934679 + AT_rich Low_complexity Low_complexity 1 27 0 285 29 0 0 chr10 36655048 36655082 -108934206 + (CA)n Simple_repeat Simple_repeat 1 34 0 242 108 27 0 chr10 36655779 36655816 -108933472 + Alu SINE Alu 265 302 -18 216 0 0 0 chr10 36656384 36656408 -108932880 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1388 202 49 0 chr10 36656412 36656560 -108932728 - AluJo SINE Alu -32 280 141 180 111 0 0 chr10 36656560 36656587 -108932701 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1388 202 49 0 chr10 36656587 36656705 -108932583 - AluJo SINE Alu -171 141 1 180 111 0 0 chr10 36656708 36656735 -108932553 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 653 148 9 0 chr10 36656741 36656849 -108932439 - FLAM_A SINE Alu -30 112 4 332 179 60 12 chr10 36657179 36657263 -108932025 + MLT2B3 LTR ERVL 6 93 -461 1934 183 55 103 chr10 36657300 36657841 -108931447 + MLT2B1 LTR ERVL 6 520 0 3148 98 18 16 chr10 36657908 36658358 -108930930 - L1PA11 LINE L1 -2 6172 5722 245 333 11 11 chr10 36658363 36658456 -108930832 - MIR SINE MIR -123 139 47 183 205 0 0 chr10 36659568 36659607 -108929681 + (CA)n Simple_repeat Simple_repeat 2 40 0 2186 110 0 19 chr10 36659680 36659988 -108929300 - AluSx SINE Alu -10 302 1 21 71 0 0 chr10 36660215 36660257 -108929031 + AT_rich Low_complexity Low_complexity 1 42 0 239 221 215 105 chr10 36661657 36661982 -108927306 + MLT1K LTR MaLR 219 579 -9 1271 237 127 29 chr10 36662575 36662992 -108926296 + MLT1J LTR MaLR 1 458 -53 225 0 0 0 chr10 36662992 36663017 -108926271 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 798 217 0 0 chr10 36663019 36663162 -108926126 - FRAM SINE Alu -30 146 4 2106 110 0 10 chr10 36663563 36663864 -108925424 - AluSx SINE Alu -14 298 1 428 265 47 77 chr10 36664509 36664568 -108924720 + MIR SINE MIR 41 100 -162 1698 138 0 55 chr10 36664568 36664880 -108924408 - AluSx SINE Alu -17 295 1 428 265 47 77 chr10 36664880 36664990 -108924298 + MIR SINE MIR 100 205 -57 1367 203 13 16 chr10 36664998 36665303 -108923985 + AluJb SINE Alu 1 304 -8 1526 174 3 20 chr10 36666424 36666718 -108922570 - AluJb SINE Alu -23 289 1 978 130 0 25 chr10 36666806 36666967 -108922321 + FRAM SINE Alu 16 172 -4 236 180 80 0 chr10 36668394 36668444 -108920844 + L2 LINE L2 3251 3304 -9 695 221 158 57 chr10 36668929 36669227 -108920061 + MER57A LTR ERV1 59 386 -17 601 194 0 57 chr10 36669228 36669352 -108919936 + FLAM_C SINE Alu 15 131 -12 1725 168 13 3 chr10 36669838 36670147 -108919141 - AluJo SINE Alu 0 312 1 8937 111 168 68 chr10 36671369 36673178 -108916110 + pTR5 LTR ERV1 504 2438 0 705 199 0 15 chr10 36673198 36673329 -108915959 - FLAM_C SINE Alu -2 131 3 1723 162 17 7 chr10 36673335 36673625 -108915663 - AluJb SINE Alu -19 293 1 1933 131 7 3 chr10 36673629 36673927 -108915361 - AluSq SINE Alu -14 299 1 369 329 41 20 chr10 36674053 36674199 -108915089 - MER5A DNA MER1_type -1 188 40 * 605 259 6 19 chr10 36674069 36674227 -108915061 + MER5A DNA MER1_type 34 189 0 203 146 0 42 chr10 36674279 36674327 -108914961 + (TAAAAA)n Simple_repeat Simple_repeat 3 48 0 2199 108 0 9 chr10 36674541 36674856 -108914432 - AluSx SINE Alu 0 312 1 377 248 26 26 chr10 36675004 36675121 -108914167 + L1MC4 LINE L1 7783 7899 -143 216 184 0 0 chr10 36675144 36675193 -108914095 + (CATATA)n Simple_repeat Simple_repeat 3 51 0 1251 195 96 22 chr10 36675239 36675511 -108913777 + AluJo SINE Alu 1 292 -10 901 127 15 0 chr10 36675545 36675679 -108913609 + FRAM SINE Alu 25 160 -16 22 0 0 0 chr10 36675747 36675769 -108913519 + AT_rich Low_complexity Low_complexity 1 22 0 2064 115 0 25 chr10 36676004 36676318 -108912970 - AluSg SINE Alu -4 306 1 1609 201 161 11 chr10 36677239 36677521 -108911767 + MLT1D LTR MaLR 3 241 -264 2154 92 16 3 chr10 36677521 36677827 -108911461 + AluSq SINE Alu 1 310 -3 1609 201 161 11 chr10 36677827 36677978 -108911310 + MLT1D LTR MaLR 241 501 -4 1641 181 0 7 chr10 36678060 36678342 -108910946 + AluJo SINE Alu 17 296 -16 1976 128 0 10 chr10 36678773 36679086 -108910202 + AluSx SINE Alu 1 310 -2 1622 170 0 17 chr10 36679113 36679424 -108909864 + AluJb SINE Alu 1 306 0 193 145 116 58 chr10 36679829 36679898 -108909390 - L2 LINE L2 -76 3237 3165 1525 180 0 37 chr10 36680307 36680630 -108908658 - AluJo SINE Alu -1 311 1 1592 142 66 10 chr10 36680956 36681245 -108908043 + AluSx SINE Alu 1 305 -7 5667 77 21 12 chr10 36681593 36682371 -108906917 - L1PA10 LINE L1 -11 6157 5373 812 131 29 7 chr10 36685973 36686110 -108903178 + L1MA3 LINE L1 6166 6305 0 2066 111 6 43 chr10 36687145 36687469 -108901819 + AluSq SINE Alu 1 312 -1 858 82 7 7 chr10 36687635 36687770 -108901518 + (TTGG)n Simple_repeat Simple_repeat 1 135 0 190 200 55 9 chr10 36688512 36688622 -108900666 + (CAAA)n Simple_repeat Simple_repeat 1 115 0 2677 215 199 75 chr10 36688622 36689141 -108900147 + L1MC4 LINE L1 6487 6940 -1102 2465 135 28 21 chr10 36689141 36689564 -108899724 + MSTA LTR MaLR 1 426 -2 2677 215 199 75 chr10 36689564 36690131 -108899157 + L1MC4 LINE L1 6940 7435 -607 4156 70 4 6 chr10 36690131 36690673 -108898615 - L1PA6 LINE L1 -2 6152 5612 2677 215 199 75 chr10 36690673 36690780 -108898508 + L1MC4 LINE L1 7435 7527 -515 1704 139 0 7 chr10 36690780 36691089 -108898199 + AluJo SINE Alu 5 311 0 2677 215 199 75 chr10 36691089 36691162 -108898126 + L1MC4 LINE L1 7527 7914 -128 302 219 8 118 chr10 36691662 36691781 -108897507 - MIR SINE MIR -77 185 80 832 149 52 8 chr10 36691791 36691925 -108897363 + AluJo SINE Alu 14 153 -159 4202 118 190 131 chr10 36691925 36693215 -108896073 + pTR5 LTR ERV1 743 2438 0 694 177 0 23 chr10 36693229 36693359 -108895929 + FRAM SINE Alu 42 168 -8 1462 168 0 30 chr10 36693887 36694184 -108895104 - AluJo SINE Alu -24 288 1 321 315 0 0 chr10 36694596 36694685 -108894603 - L2 LINE L2 0 3272 3184 1706 85 31 0 chr10 36695112 36695335 -108893953 - MER30 DNA MER1_type 0 230 1 1889 156 17 0 chr10 36696088 36696390 -108892898 + AluSx SINE Alu 5 311 -1 526 195 141 16 chr10 36696431 36696592 -108892696 - MER5A DNA MER1_type -1 188 5 2095 125 0 7 chr10 36696985 36697289 -108891999 - AluSx SINE Alu -10 302 1 208 0 62 0 chr10 36697586 36697618 -108891670 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 864 127 0 0 chr10 36697622 36697740 -108891548 - FLAM_C SINE Alu -15 118 1 523 251 147 25 chr10 36698060 36698223 -108891065 + MER5A DNA MER1_type 7 189 0 344 272 141 28 chr10 36699145 36699358 -108889930 + L1MEd LINE L1 659 895 -5310 487 281 100 40 chr10 36699394 36699652 -108889636 + L1MEd LINE L1 1139 1380 -5016 5117 55 3 6 chr10 36699652 36700293 -108888995 + L1PA7 LINE L1 5515 6153 -1 487 281 100 40 chr10 36700293 36700515 -108888773 + L1MEd LINE L1 1380 1648 -4748 328 202 202 10 chr10 36700668 36700767 -108888521 - MER5C DNA MER1_type -200 124 7 191 375 48 30 chr10 36701751 36701919 -108887369 - L3 LINE CR1 -1 1576 1406 2047 134 38 41 chr10 36701947 36702312 -108886976 + THE1B LTR MaLR 1 364 0 2001 121 0 30 chr10 36703031 36703336 -108885952 + AluSq SINE Alu 11 306 -7 1256 213 3 38 chr10 36703558 36703873 -108885415 - AluJo SINE Alu -8 304 1 36034 101 15 14 chr10 36704107 36710252 -108879036 + L1PA7 LINE L1 11 6154 0 1807 162 23 3 chr10 36710265 36710568 -108878720 + AluJb SINE Alu 1 309 -3 306 348 118 6 chr10 36710568 36710746 -108878542 + HAL1 LINE L1 1104 1301 -1206 519 280 136 36 chr10 36711514 36711955 -108877333 + MLT1J LTR MaLR 6 510 -1 1656 179 0 13 chr10 36712829 36713131 -108876157 + AluJb SINE Alu 12 309 -3 2096 133 23 15 chr10 36713134 36713493 -108875795 + MLT1A1 LTR MaLR 1 363 -2 287 297 22 0 chr10 36713505 36713596 -108875692 - MLT1L LTR MaLR -49 566 474 443 129 0 0 chr10 36714180 36714242 -108875046 + AluS SINE Alu 5 66 -247 338 129 94 47 chr10 36714392 36714477 -108874811 + LTR67 LTR ERVL 462 550 -7 233 316 79 0 chr10 36716329 36716405 -108872883 + L2 LINE L2 3191 3272 -41 836 135 38 8 chr10 36716791 36716924 -108872364 + AluSg/x SINE Alu 103 239 -73 1737 213 54 26 chr10 36719068 36719335 -108869953 + L1ME2 LINE L1 5504 5791 -373 1997 132 0 0 chr10 36719335 36719648 -108869640 + AluSx SINE Alu 1 313 0 1737 213 54 26 chr10 36719648 36719801 -108869487 + L1ME2 LINE L1 5791 5938 -226 801 156 39 0 chr10 36719806 36719934 -108869354 + AluJo SINE Alu 2 134 -178 27 68 0 14 chr10 36719934 36719962 -108869326 + AT_rich Low_complexity Low_complexity 1 28 -44 1685 80 0 9 chr10 36719962 36720188 -108869100 + L1PA8 LINE L1 5948 6171 -1 27 68 0 14 chr10 36720188 36720232 -108869056 + AT_rich Low_complexity Low_complexity 28 72 0 639 260 19 18 chr10 36720232 36720481 -108868807 + L1MA10 LINE L1 5922 6327 -5 289 312 83 70 chr10 36720496 36720797 -108868491 + L2 LINE L2 2968 3272 0 1761 130 0 14 chr10 36720813 36721097 -108868191 + L1PA14 LINE L1 5882 6161 0 695 68 0 10 chr10 36721182 36721285 -108868003 + (TGGA)n Simple_repeat Simple_repeat 4 105 0 1913 134 16 22 chr10 36722793 36723285 -108866003 + AluSx SINE Alu 1 312 0 254 194 16 0 chr10 36723287 36723349 -108865939 + GA-rich Low_complexity Low_complexity 1 63 0 388 228 168 0 chr10 36723351 36723452 -108865836 - MER69A DNA AcHobo -59 118 1 885 240 70 25 chr10 36723999 36724224 -108865064 + MIR SINE MIR 10 248 -14 2360 39 0 36 chr10 36724224 36724531 -108864757 - AluY SINE Alu -15 296 1 885 240 70 25 chr10 36724531 36724547 -108864741 + MIR SINE MIR 248 262 0 1781 119 0 84 chr10 36724849 36725169 -108864119 + AluSx SINE Alu 1 293 -19 288 288 120 16 chr10 36725406 36725531 -108863757 + MIR SINE MIR 92 229 -33 506 130 0 0 chr10 36726343 36726412 -108862876 + AluS SINE Alu 6 74 -238 2106 88 3 22 chr10 36726433 36726750 -108862538 + AluY SINE Alu 1 311 0 2343 86 0 0 chr10 36728105 36728409 -108860879 - AluSx SINE Alu -8 304 1 769 273 36 5 chr10 36728442 36728636 -108860652 - MIR SINE MIR -62 200 1 274 56 0 0 chr10 36729288 36729324 -108859964 - L2 LINE L2 -4 3309 3274 4564 237 48 79 chr10 36730923 36733337 -108855951 + L1M3a LINE L1 251 2739 -3295 2269 80 0 3 chr10 36733337 36733637 -108855651 + AluY SINE Alu 1 299 -12 4564 237 48 79 chr10 36733637 36734572 -108854716 + L1M3a LINE L1 2739 3240 -2794 1125 166 80 140 chr10 36734572 36734921 -108854367 - MER7A DNA MER2_type -20 326 1 4564 237 48 79 chr10 36734921 36735580 -108853708 + L1M3a LINE L1 3240 3918 -2116 227 224 94 12 chr10 36735616 36735701 -108853587 - LTR43 LTR ERV1 -20 582 491 1152 226 55 43 chr10 36735793 36736120 -108853168 - LTR43 LTR ERV1 -140 462 132 283 162 44 15 chr10 36736229 36736297 -108852991 - LTR60 LTR ERV1 -516 70 1 888 149 0 19 chr10 36736297 36736451 -108852837 + L1M3a LINE L1 3957 4107 -1927 1062 164 11 11 chr10 36736451 36736634 -108852654 - LTR45B LTR ERV1 -272 217 35 261 57 0 0 chr10 36736688 36736723 -108852565 + (CA)n Simple_repeat Simple_repeat 2 36 0 546 280 69 34 chr10 36736723 36737101 -108852187 - L1ME4a LINE L1 -157 5964 5574 1572 170 72 0 chr10 36737161 36737438 -108851850 - AluJo SINE Alu -15 297 1 811 119 17 0 chr10 36737614 36737732 -108851556 - AluJb SINE Alu -191 121 2 206 271 0 34 chr10 36737738 36737797 -108851491 + L2 LINE L2 3186 3242 -30 201 74 0 0 chr10 36737799 36737826 -108851462 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 445 321 134 34 chr10 36738145 36738622 -108850666 + L2 LINE L2 390 914 -2400 264 59 0 0 chr10 36738766 36738800 -108850488 + (TGAA)n Simple_repeat Simple_repeat 4 37 0 47 47 0 12 chr10 36740307 36740373 -108848915 + AT_rich Low_complexity Low_complexity 1 67 -18 1907 131 14 0 chr10 36740373 36740532 -108848756 - AluSx SINE Alu -25 287 121 234 0 0 0 chr10 36740532 36740558 -108848730 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1907 131 14 0 chr10 36740558 36740681 -108848607 - AluSx SINE Alu -191 121 1 47 47 0 12 chr10 36740681 36740700 -108848588 + AT_rich Low_complexity Low_complexity 67 85 0 1465 157 45 11 chr10 36740701 36740968 -108848320 - AluJo SINE Alu -22 290 15 222 180 80 0 chr10 36741192 36741242 -108848046 + MIR SINE MIR 88 141 -121 230 83 0 56 chr10 36742506 36742542 -108846746 + U2 snRNA snRNA 1 34 -154 1915 143 7 0 chr10 36742719 36743012 -108846276 + AluSx SINE Alu 1 295 -17 318 203 0 0 chr10 36744179 36744248 -108845040 + LTR58 LTR ERV1 361 429 -250 1510 75 58 40 chr10 36744285 36744511 -108844777 + MER30 DNA MER1_type 1 230 0 24 0 0 0 chr10 36746200 36746224 -108843064 + AT_rich Low_complexity Low_complexity 1 24 0 243 250 234 31 chr10 36748387 36748515 -108840773 - L2 LINE L2 -1 3312 3159 396 88 0 0 chr10 36750232 36750289 -108838999 + (CA)n Simple_repeat Simple_repeat 2 58 0 667 281 53 9 chr10 36750421 36750651 -108838637 + MIR SINE MIR 12 249 -13 1770 168 0 16 chr10 36750712 36751021 -108838267 + AluJb SINE Alu 3 306 -6 1789 160 0 3 chr10 36751087 36751380 -108837908 - AluSx SINE Alu -20 292 1 842 177 165 37 chr10 36752192 36752435 -108836853 + L1MA7 LINE L1 6008 6281 -10 1718 155 7 0 chr10 36752440 36752743 -108836545 - AluY SINE Alu -4 307 3 186 193 0 0 chr10 36752904 36752961 -108836327 + A-rich Low_complexity Low_complexity 1 57 0 22 56 0 0 chr10 36755167 36755203 -108834085 + GC_rich Low_complexity Low_complexity 1 36 0 233 316 79 0 chr10 36756617 36756693 -108832595 + L2 LINE L2 3191 3272 -41 1112 160 27 0 chr10 36757072 36757260 -108832028 + AluSg/x SINE Alu 103 295 -17 318 203 0 0 chr10 36758427 36758496 -108830792 + LTR58 LTR ERV1 361 429 -250 1481 76 62 40 chr10 36758533 36758758 -108830530 + MER30 DNA MER1_type 1 230 0 24 0 0 0 chr10 36760444 36760468 -108828820 + AT_rich Low_complexity Low_complexity 1 24 0 243 250 234 31 chr10 36762631 36762759 -108826529 - L2 LINE L2 -1 3312 3159 378 91 0 0 chr10 36764477 36764532 -108824756 + (CA)n Simple_repeat Simple_repeat 2 56 0 640 288 48 1 chr10 36764664 36764884 -108824404 + MIR SINE MIR 12 239 -23 1806 172 3 16 chr10 36764955 36765263 -108824025 + AluJb SINE Alu 3 306 -6 1868 158 3 3 chr10 36765329 36765621 -108823667 - AluSx SINE Alu -20 292 1 858 178 166 37 chr10 36766433 36766674 -108822614 + L1MA7 LINE L1 6008 6279 -12 2500 69 3 0 chr10 36766682 36766987 -108822301 - AluY SINE Alu -5 306 1 31 0 0 0 chr10 36766987 36767018 -108822270 + AT_rich Low_complexity Low_complexity 1 31 0 2050 129 3 0 chr10 36768605 36768892 -108820396 + AluSx SINE Alu 1 288 -24 274 216 259 11 chr10 36768926 36769060 -108820228 + MIR SINE MIR 5 174 -34 1840 151 11 3 chr10 36769335 36769620 -108819668 - AluJb SINE Alu -25 287 1 1763 144 70 30 chr10 36770979 36771278 -108818010 - AluJo SINE Alu 0 312 2 26 0 0 0 chr10 36771401 36771427 -108817861 + AT_rich Low_complexity Low_complexity 1 26 0 1520 163 0 8 chr10 36771819 36772059 -108817229 + AluJo SINE Alu 72 309 -3 21 0 0 0 chr10 36774376 36774397 -108814891 + AT_rich Low_complexity Low_complexity 1 21 0 1537 141 55 52 chr10 36774403 36774693 -108814595 - AluJo SINE Alu -4 308 18 2292 87 7 3 chr10 36776038 36776336 -108812952 - AluSg SINE Alu -11 299 1 296 284 134 0 chr10 36778439 36778566 -108810722 + L2 LINE L2 3165 3308 -5 2332 172 23 47 chr10 36779164 36779607 -108809681 + Tigger2a DNA MER2_type 1 432 -2 202 229 0 0 chr10 36779755 36779790 -108809498 - L3b LINE CR1 -15 1568 1534 899 254 0 0 chr10 36779799 36779988 -108809300 - MER5A DNA MER1_type 0 189 1 2069 147 0 0 chr10 36780118 36780424 -108808864 - AluSx SINE Alu -6 306 1 181 274 59 0 chr10 36780428 36780479 -108808809 - MIR3 SINE MIR -45 163 110 1424 148 163 44 chr10 36780680 36780950 -108808338 - AluJo SINE Alu 0 302 1 200 341 79 47 chr10 36780976 36781190 -108808098 + L2 LINE L2 664 884 -2430 1763 176 3 10 chr10 36781760 36782055 -108807233 + AluJo SINE Alu 1 293 -19 379 330 34 62 chr10 36783223 36783292 -108805996 - MIR3 SINE MIR -56 206 137 192 97 0 0 chr10 36783292 36783323 -108805965 + (CCCA)n Simple_repeat Simple_repeat 3 33 0 379 330 34 62 chr10 36783323 36783462 -108805826 - MIR3 SINE MIR -125 137 2 4085 163 117 21 chr10 36783641 36784395 -108804893 + LTR1B LTR ERV1 1 826 0 403 297 80 51 chr10 36786712 36786887 -108802401 - MER5A DNA MER1_type 0 189 10 329 252 203 0 chr10 36786914 36787037 -108802251 - Charlie8 DNA MER1_type -2228 189 42 1113 242 71 24 chr10 36787976 36788077 -108801211 + MLT1E LTR MaLR 1 96 -497 584 110 10 40 chr10 36788077 36788177 -108801111 - L1PA11 LINE L1 -3 6171 6075 1113 242 71 24 chr10 36788177 36788556 -108800732 + MLT1E LTR MaLR 96 592 -1 1782 159 33 0 chr10 36793244 36793546 -108795742 + AluJo SINE Alu 1 312 0 455 122 11 0 chr10 36793581 36793671 -108795617 + (GGAA)n Simple_repeat Simple_repeat 4 94 0 298 117 0 52 chr10 36794125 36794202 -108795086 + (GGAA)n Simple_repeat Simple_repeat 2 74 0 2034 108 38 11 chr10 36794558 36794864 -108794424 + AluSc SINE Alu 1 309 0 548 230 59 32 chr10 36796096 36796283 -108793005 - HAL1 LINE L1 -146 2361 2170 2101 282 68 40 chr10 36796455 36796706 -108792582 - HAL1 LINE L1 -790 1717 1475 315 0 0 0 chr10 36796706 36796741 -108792547 + (TA)n Simple_repeat Simple_repeat 1 35 0 2101 282 68 40 chr10 36796741 36797558 -108791730 - HAL1 LINE L1 -1032 1475 619 31 76 0 0 chr10 36799189 36799255 -108790033 + AT_rich Low_complexity Low_complexity 1 66 0 388 237 125 7 chr10 36800476 36800628 -108788660 - MER104 DNA Tc2 -10 170 1 451 294 43 18 chr10 36801762 36801925 -108787363 - L2 LINE L2 -994 2320 2154 22 0 0 0 chr10 36802930 36802952 -108786336 + AT_rich Low_complexity Low_complexity 1 22 0 2006 184 20 3 chr10 36803749 36804091 -108785197 - MER7A DNA MER2_type 0 346 1 430 301 46 31 chr10 36804370 36804566 -108784722 - MIR3 SINE MIR 0 208 10 672 169 0 85 chr10 36804622 36804752 -108784536 - AluJo/FRAM SINE Alu -21 291 173 417 208 0 0 chr10 36804753 36804825 -108784463 - AluJ/FLAM SINE Alu -230 72 1 291 303 83 28 chr10 36806416 36806525 -108782763 - L2 LINE L2 -19 3253 3139 559 301 56 44 chr10 36806780 36807099 -108782189 + HAL1 LINE L1 5 327 -2180 351 0 0 0 chr10 36807183 36807222 -108782066 + (TG)n Simple_repeat Simple_repeat 2 40 0 26 0 0 0 chr10 36807225 36807251 -108782037 + AT_rich Low_complexity Low_complexity 1 26 0 1666 164 47 0 chr10 36807636 36807911 -108781377 - AluJo SINE Alu -24 288 1 302 307 65 84 chr10 36808760 36808975 -108780313 + L2 LINE L2 3061 3271 -1 375 277 72 20 chr10 36809416 36809611 -108779677 + MER112 DNA MER1_type 8 212 -48 771 190 7 7 chr10 36809623 36809760 -108779528 + FLAM_C SINE Alu 7 143 0 923 217 25 0 chr10 36810185 36810383 -108778905 + MER3 DNA MER1_type 2 204 -5 191 345 17 0 chr10 36810719 36810777 -108778511 + MIR SINE MIR 45 103 -105 566 247 135 18 chr10 36811217 36811387 -108777901 - MIR SINE MIR -16 246 57 1846 148 50 13 chr10 36812494 36812792 -108776496 + AluJo SINE Alu 1 309 -3 419 204 83 65 chr10 36813026 36813273 -108776015 + MER41E LTR ERV1 55 430 -205 265 206 0 16 chr10 36813567 36813630 -108775658 + LTR28 LTR ERV1 1 62 -958 * 1864 167 23 27 chr10 36813597 36814012 -108775276 + MER61D LTR ERV1 14 501 0 186 362 58 0 chr10 36814068 36814137 -108775151 - L2 LINE L2 -39 3233 3161 668 217 47 0 chr10 36815096 36815225 -108774063 - MER58B DNA MER1_type -9 332 198 323 308 121 27 chr10 36816627 36816851 -108772437 - L3b LINE CR1 -237 1346 1102 1554 165 7 62 chr10 36817853 36818162 -108771126 + AluJo SINE Alu 1 292 -20 447 326 70 27 chr10 36821035 36821222 -108768066 + L3b LINE CR1 1284 1478 -105 188 295 11 53 chr10 36821231 36821326 -108767962 - L2 LINE L2 -640 2674 2584 1893 147 7 0 chr10 36821611 36821897 -108767391 - AluJo SINE Alu -24 288 1 227 303 327 0 chr10 36821921 36822086 -108767202 - L2 LINE L2 0 3272 3054 2336 107 0 7 chr10 36823178 36823488 -108765800 + AluSx SINE Alu 1 308 -4 269 171 289 0 chr10 36824048 36824124 -108765164 - MER5A DNA MER1_type -83 106 9 312 51 51 0 chr10 36824220 36824279 -108765009 + A-rich Low_complexity Low_complexity 6 67 0 24 32 0 0 chr10 36827735 36827766 -108761522 + AT_rich Low_complexity Low_complexity 1 31 0 336 154 29 0 chr10 36828454 36828558 -108760730 + (TG)n Simple_repeat Simple_repeat 2 108 0 31 0 0 0 chr10 36828691 36828722 -108760566 + AT_rich Low_complexity Low_complexity 1 31 0 195 42 0 0 chr10 36830669 36830693 -108758595 + (CA)n Simple_repeat Simple_repeat 1 24 0 1146 68 0 85 chr10 36831420 36831542 -108757746 - L1MA1 LINE L1 0 6302 6198 2300 78 3 0 chr10 36831542 36831835 -108757453 - AluSg SINE Alu -14 296 3 1146 68 0 85 chr10 36831835 36831889 -108757399 - L1MA1 LINE L1 -104 6198 6141 273 359 120 0 chr10 36832308 36832450 -108756838 - L2 LINE L2 -270 3043 2885 328 209 143 0 chr10 36832495 36832586 -108756702 + MIR SINE MIR 76 179 -83 180 0 0 0 chr10 36834234 36834254 -108755034 + (A)n Simple_repeat Simple_repeat 1 20 0 687 120 0 10 chr10 36834733 36834833 -108754455 - AluJ SINE Alu -25 287 189 1278 204 62 28 chr10 36834838 36835414 -108753874 + LTR9B LTR ERV1 7 644 0 1245 165 0 5 chr10 36835414 36835608 -108753680 - AluJ SINE Alu -119 193 1 459 0 0 0 chr10 36837304 36837355 -108751933 + (TTATA)n Simple_repeat Simple_repeat 4 54 0 325 293 78 36 chr10 36837407 36837574 -108751714 - MIR SINE MIR -50 212 39 1042 148 19 6 chr10 36837711 36837873 -108751415 + FRAM SINE Alu 1 164 -2 210 259 24 59 chr10 36838332 36838417 -108750871 + L2 LINE L2 3142 3223 -49 4235 204 123 22 chr10 36840446 36840547 -108748741 + Charlie1 DNA MER1_type 5 94 -2667 1344 179 50 44 chr10 36840547 36840844 -108748444 + AluJo SINE Alu 1 299 -13 4235 204 123 22 chr10 36840844 36842091 -108747197 + Charlie1 DNA MER1_type 94 2761 0 252 304 134 86 chr10 36842124 36842697 -108746591 - L2 LINE L2 -88 3184 2566 198 103 0 0 chr10 36843137 36843166 -108746122 + (TGGGGG)n Simple_repeat Simple_repeat 1 29 0 1704 122 38 94 chr10 36843575 36843894 -108745394 - AluJb SINE Alu -11 301 1 21 36 0 0 chr10 36846109 36846137 -108743151 + AT_rich Low_complexity Low_complexity 1 28 0 462 272 30 69 chr10 36847320 36847522 -108741766 + MIR SINE MIR 68 261 -1 2288 65 0 0 chr10 36848058 36848334 -108740954 - AluY SINE Alu -2 309 34 2113 85 31 27 chr10 36849227 36849521 -108739767 - AluSc SINE Alu -14 295 1 423 38 0 0 chr10 36849948 36850001 -108739287 + (TG)n Simple_repeat Simple_repeat 1 53 0 2660 166 20 11 chr10 36850387 36850872 -108738416 + LTR45B LTR ERV1 3 525 0 330 313 41 6 chr10 36851627 36851800 -108737488 - MIR SINE MIR -49 213 34 291 279 192 34 chr10 36852574 36852782 -108736506 + MIR SINE MIR 20 260 -2 250 254 42 0 chr10 36853218 36853289 -108735999 - L1MD2 LINE L1 -237 6122 6049 186 346 99 0 chr10 36853318 36853399 -108735889 - L2 LINE L2 -14 3258 3170 621 111 11 11 chr10 36853479 36853569 -108735719 - HY4 scRNA scRNA -3 90 1 1865 163 3 0 chr10 36853571 36853859 -108735429 - AluJo SINE Alu -15 297 9 2250 150 9 17 chr10 36854910 36855257 -108734031 + MER2 DNA MER2_type 1 344 0 2144 136 14 163 chr10 36855690 36856192 -108733096 - LTR32 LTR ERVL -4 467 41 2375 179 30 5 chr10 36857943 36858384 -108730904 - MER66A LTR ERV1 0 478 27 438 307 92 26 chr10 36861081 36861309 -108727979 + MIR SINE MIR 20 262 0 2289 107 7 0 chr10 36862994 36863304 -108725984 + AluSx SINE Alu 1 312 0 1828 172 52 77 chr10 36864539 36864981 -108724307 - MSTB1 LTR MaLR 0 432 2 1816 156 6 35 chr10 36865378 36865692 -108723596 - AluJo SINE Alu -7 305 1 723 198 8 0 chr10 36866040 36866161 -108723127 + FLAM_C SINE Alu 12 133 -10 487 331 102 8 chr10 36869226 36869492 -108719796 - L2 LINE L2 -4 3309 3019 185 132 0 151 chr10 36869771 36869824 -108719464 + L2 LINE L2 3228 3272 0 210 277 36 24 chr10 36872128 36872211 -108717077 + MIR SINE MIR 103 186 -76 2584 199 128 43 chr10 36872560 36872888 -108716400 + MER45B DNA AcHobo 1 300 -740 1065 92 61 0 chr10 36872888 36873051 -108716237 - L1MA8 LINE L1 0 6291 6119 2584 199 128 43 chr10 36873051 36873450 -108715838 + MER45B DNA AcHobo 300 797 -243 450 100 0 0 chr10 36873453 36873513 -108715775 + L1MB2 LINE L1 6072 6131 -40 1333 163 16 12 chr10 36873513 36873770 -108715518 + MER45B DNA AcHobo 773 1030 -10 234 294 114 57 chr10 36874714 36874942 -108714346 + L1MC4 LINE L1 7526 7766 -276 536 300 70 16 chr10 36875206 36875449 -108713839 - MIR SINE MIR 0 262 7 192 213 0 85 chr10 36876623 36876670 -108712618 - L2 LINE L2 -109 3163 3121 2409 104 0 0 chr10 36876832 36877139 -108712149 - AluSq SINE Alu -6 307 1 2392 201 50 72 chr10 36877168 36877761 -108711527 + L1MB7 LINE L1 4930 5535 -649 2068 138 0 0 chr10 36877761 36878051 -108711237 + AluSx SINE Alu 1 290 -22 2392 201 50 72 chr10 36878051 36878445 -108710843 + L1MB7 LINE L1 5535 5936 -248 5474 109 35 71 chr10 36878445 36878847 -108710441 + L1PA15 LINE L1 5070 5485 -680 2252 98 0 7 chr10 36878847 36879144 -108710144 + AluSp SINE Alu 1 295 -18 5474 109 35 71 chr10 36879144 36879349 -108709939 + L1PA15 LINE L1 5485 5696 -469 551 62 0 12 chr10 36879349 36879430 -108709858 + (TA)n Simple_repeat Simple_repeat 1 80 0 5474 109 35 71 chr10 36879430 36879941 -108709347 + L1PA15 LINE L1 5696 6162 -3 2392 201 50 72 chr10 36879941 36880029 -108709259 + L1MB7 LINE L1 5936 5961 -223 697 193 14 0 chr10 36880056 36880196 -108709092 + L1MB7 LINE L1 6035 6176 -8 1485 158 0 97 chr10 36880750 36881060 -108708228 - AluJo SINE Alu -21 291 12 231 36 0 0 chr10 36881180 36881208 -108708080 + (TG)n Simple_repeat Simple_repeat 2 29 0 1681 166 10 14 chr10 36882271 36882560 -108706728 + AluJo SINE Alu 6 293 -19 222 37 0 0 chr10 36882788 36882815 -108706473 + (A)n Simple_repeat Simple_repeat 1 27 0 1821 179 0 3 chr10 36884224 36884525 -108704763 - AluJo SINE Alu -12 300 1 180 0 0 0 chr10 36884541 36884561 -108704727 + (T)n Simple_repeat Simple_repeat 1 20 0 1087 286 159 21 chr10 36884697 36885352 -108703936 + L2 LINE L2 1903 2647 -667 256 218 13 51 chr10 36885364 36885442 -108703846 + LTR50 LTR ERVL 1 75 -720 * 379 256 101 0 chr10 36885432 36885561 -108703727 + LTR33A LTR ERVL 354 495 -28 429 343 82 6 chr10 36885806 36886140 -108703148 + L2 LINE L2 2684 3042 -230 23 33 0 0 chr10 36886182 36886212 -108703076 + AT_rich Low_complexity Low_complexity 1 30 0 180 111 0 0 chr10 36886305 36886332 -108702956 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 21 0 0 0 chr10 36886608 36886629 -108702659 + AT_rich Low_complexity Low_complexity 1 21 0 214 217 0 43 chr10 36887567 36887613 -108701675 - MIR3 SINE MIR -21 187 144 2034 151 0 3 chr10 36891041 36891340 -108697948 + AluSx SINE Alu 1 298 -14 296 272 96 29 chr10 36891527 36891663 -108697625 - MIR SINE MIR -6 256 112 312 260 100 64 chr10 36891663 36891913 -108697375 + L1ME4a LINE L1 5765 6023 -98 560 303 65 47 chr10 36892451 36892959 -108696329 - L2 LINE L2 -3 3310 2800 184 246 154 0 chr10 36894010 36894075 -108695213 + MIR3 SINE MIR 134 208 0 1926 133 0 4 chr10 36894198 36894462 -108694826 + AluSx SINE Alu 26 288 -24 1807 105 101 0 chr10 36895077 36895334 -108693954 + AluSg SINE Alu 1 283 -27 243 255 32 43 chr10 36895405 36895499 -108693789 - MIR SINE MIR -37 225 133 414 0 0 0 chr10 36897100 36897146 -108692142 + (CAAAA)n Simple_repeat Simple_repeat 3 48 0 641 288 82 25 chr10 36897770 36898138 -108691150 + L1MEc LINE L1 31 419 -5977 845 189 77 0 chr10 36898452 36898621 -108690667 + AluJo SINE Alu 118 299 -13 624 228 31 81 chr10 36898630 36898753 -108690535 + L1MEc LINE L1 768 873 -5523 2126 117 20 0 chr10 36898753 36899052 -108690236 + AluSx SINE Alu 6 310 -2 624 228 31 81 chr10 36899052 36899187 -108690101 + L1MEc LINE L1 873 1013 -5383 403 189 72 1 chr10 36900063 36900159 -108689129 - MIR SINE MIR -70 138 37 843 168 0 15 chr10 36900701 36900838 -108688450 - FLAM_C SINE Alu -7 136 2 797 191 191 19 chr10 36902897 36903106 -108686182 - MIR SINE MIR 0 262 18 344 253 53 106 chr10 36903409 36903674 -108685614 - L2 LINE L2 -1 3312 3062 327 212 0 0 chr10 36904220 36904305 -108684983 + (TATATG)n Simple_repeat Simple_repeat 3 87 0 927 260 13 8 chr10 36905360 36905619 -108683669 + L1PB4 LINE L1 5896 6156 0 2258 103 3 0 chr10 36905626 36905928 -108683360 + AluSg SINE Alu 1 303 -7 324 0 0 0 chr10 36906046 36906082 -108683206 + (TG)n Simple_repeat Simple_repeat 2 37 0 362 315 68 12 chr10 36906662 36906824 -108682464 - MER91B DNA MER1_type -4 186 16 1633 161 17 53 chr10 36910281 36910580 -108678708 + AluJo SINE Alu 5 292 -20 2026 182 123 18 chr10 36910729 36911169 -108678119 - MLT1D LTR MaLR -19 486 1 275 161 18 36 chr10 36911308 36911364 -108677924 - Alu SINE Alu -1 300 246 1592 167 18 14 chr10 36911364 36911639 -108677649 - AluJo SINE Alu -34 278 3 881 169 0 0 chr10 36911640 36911776 -108677512 - AluJo SINE Alu -176 136 1 225 281 112 31 chr10 36911776 36912036 -108677252 - L2 LINE L2 -1603 1711 1431 2166 113 0 0 chr10 36912908 36913338 -108675950 + AluSx SINE Alu 1 430 0 312 256 175 22 chr10 36913568 36913705 -108675583 + MER5A DNA MER1_type 32 189 0 1724 184 7 13 chr10 36913728 36914038 -108675250 - AluJo SINE Alu -4 308 1 709 262 56 26 chr10 36914685 36914851 -108674437 - MIR SINE MIR -21 241 65 1788 157 28 7 chr10 36914851 36915138 -108674150 + AluJb SINE Alu 5 297 -15 709 262 56 26 chr10 36915138 36915204 -108674084 - MIR SINE MIR -197 65 2 2081 153 14 14 chr10 36915506 36915872 -108673416 + MER47A DNA MER2_type 1 366 0 258 180 0 0 chr10 36916130 36916180 -108673108 - MLT1J2 LTR MaLR -329 121 72 2025 129 7 17 chr10 36916220 36916522 -108672766 - AluJo SINE Alu -13 299 1 195 309 18 0 chr10 36917990 36918045 -108671243 - L3 LINE CR1 -20 1557 1502 843 200 22 22 chr10 36919225 36919410 -108669878 + MER5A DNA MER1_type 5 189 0 6334 29 0 0 chr10 36919673 36920409 -108668879 + L1PA5 LINE L1 5416 6151 -3 634 123 17 13 chr10 36920426 36920566 -108668722 + L1MA4A LINE L1 6160 6299 -4 200 158 0 123 chr10 36920713 36920770 -108668518 + L2 LINE L2 2688 2737 -577 2145 124 0 0 chr10 36921612 36921910 -108667378 - AluSq SINE Alu -15 298 1 2478 228 23 27 chr10 36922670 36923408 -108665880 + L1MD1 LINE L1 3657 4391 -1755 2886 243 37 48 chr10 36923508 36923926 -108665362 + L1MD1 LINE L1 4870 5291 -951 1569 188 15 0 chr10 36923926 36924187 -108665101 + AluJb SINE Alu 14 278 -34 303 49 0 0 chr10 36924190 36924231 -108665057 + (CAAA)n Simple_repeat Simple_repeat 1 41 0 2886 243 37 48 chr10 36924231 36925205 -108664083 + L1MD1 LINE L1 5293 6240 -2 1401 152 25 33 chr10 36929528 36929771 -108659517 - AluJo SINE Alu -30 282 42 2478 96 19 16 chr10 36929896 36930270 -108659018 + THE1C LTR MaLR 1 375 0 828 198 0 50 chr10 36930599 36930781 -108658507 - FRAM SINE Alu 0 176 4 230 329 29 7 chr10 36932274 36932414 -108656874 - MER103 DNA DNA -12 154 12 21 36 0 0 chr10 36935228 36935256 -108654032 + AT_rich Low_complexity Low_complexity 1 28 0 1827 140 9 59 chr10 36936742 36937064 -108652224 + AluJo SINE Alu 1 306 -6 1181 268 137 36 chr10 36937684 36938517 -108650771 - L2 LINE L2 0 3313 2371 1930 168 0 0 chr10 36939393 36939685 -108649603 + AluJb SINE Alu 1 292 -20 1057 148 32 56 chr10 36940434 36940650 -108648638 - AluJb SINE Alu -20 292 82 1987 131 0 0 chr10 36940672 36940954 -108648334 - AluSx SINE Alu -30 282 1 216 0 0 0 chr10 36940960 36940984 -108648304 + (TAA)n Simple_repeat Simple_repeat 1 24 0 365 280 84 35 chr10 36942971 36943114 -108646174 - MIR SINE MIR -66 196 47 684 165 0 9 chr10 36943231 36943346 -108645942 + FLAM_C SINE Alu 3 116 -17 27 0 0 0 chr10 36944174 36944201 -108645087 + AT_rich Low_complexity Low_complexity 1 27 0 726 172 15 0 chr10 36946385 36946519 -108642769 + AluJo SINE Alu 1 136 -176 1931 128 11 0 chr10 36947714 36947979 -108641309 - AluJo SINE Alu -30 282 15 24 32 0 0 chr10 36947996 36948027 -108641261 + AT_rich Low_complexity Low_complexity 1 31 0 332 222 192 0 chr10 36948304 36948403 -108640885 + FLAM_A SINE Alu 5 122 -11 1625 171 67 0 chr10 36948505 36948774 -108640514 + AluJo SINE Alu 3 289 -23 322 260 24 55 chr10 36949249 36949376 -108639912 + MLT1J LTR MaLR 4 126 -385 763 200 119 60 chr10 36949399 36949634 -108639654 + MIR SINE MIR 11 259 -3 1921 197 78 6 chr10 36949762 36950234 -108639054 + L1MB3 LINE L1 5676 6181 -2 313 304 80 0 chr10 36950252 36950390 -108638898 + MLT1J LTR MaLR 318 466 -45 1094 171 215 36 chr10 36951836 36951956 -108637332 + AluJb SINE Alu 1 98 -204 195 42 0 0 chr10 36951956 36951980 -108637308 + (TGAA)n Simple_repeat Simple_repeat 3 26 0 1094 171 215 36 chr10 36951980 36952110 -108637178 + AluJb SINE Alu 98 296 -6 432 313 124 72 chr10 36952773 36953485 -108635803 + L2 LINE L2 1952 2700 -614 941 289 8 4 chr10 36953784 36954023 -108635265 - MIR SINE MIR -21 241 2 307 299 19 38 chr10 36954029 36954186 -108635102 - MER112 DNA MER1_type -106 154 1 395 243 0 39 chr10 36954372 36954475 -108634813 + L2 LINE L2 3173 3271 -1 765 164 0 15 chr10 36955675 36955809 -108633479 + FLAM_C SINE Alu 2 133 0 568 318 52 32 chr10 36956050 36956302 -108632986 + MIR SINE MIR 4 260 -2 1504 163 52 45 chr10 36957157 36957445 -108631843 + AluJo SINE Alu 1 290 -22 1750 136 54 0 chr10 36957472 36957751 -108631537 + AluSx SINE Alu 1 294 -18 2173 99 11 0 chr10 36957830 36958114 -108631174 + AluSq SINE Alu 1 287 -26 2424 54 0 14 chr10 36958352 36958649 -108630639 - AluY SINE Alu -18 293 1 409 234 102 15 chr10 36958680 36958877 -108630411 - LTR16C LTR ERVL 0 491 278 2184 286 123 51 chr10 36959359 36960739 -108628549 - L2 LINE L2 -180 3133 1645 1650 174 44 0 chr10 36960739 36961037 -108628251 + AluJo SINE Alu 2 312 0 2184 286 123 51 chr10 36961037 36961171 -108628117 - L2 LINE L2 -1668 1645 1522 332 172 0 0 chr10 36962727 36962791 -108626497 - FLAM SINE Alu -1 132 69 1589 207 90 13 chr10 36966037 36966413 -108622875 + MER63B DNA MER1_type 32 436 0 207 0 0 0 chr10 36968349 36968372 -108620916 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 547 206 0 0 chr10 36968393 36968490 -108620798 - FLAM_A SINE Alu -44 98 2 203 277 20 40 chr10 36968592 36968693 -108620595 + CT-rich Low_complexity Low_complexity 2 100 0 2219 79 0 47 chr10 36970217 36970534 -108618754 - AluSg SINE Alu -6 304 3 2254 105 13 0 chr10 36970536 36970840 -108618448 - AluSc SINE Alu -1 308 1 315 295 11 0 chr10 36973834 36973929 -108615359 + MLT1L LTR MaLR 512 607 -8 183 339 52 52 chr10 36974899 36975014 -108614274 + L3 LINE CR1 1448 1562 -15 2078 111 0 0 chr10 36976476 36976747 -108612541 - AluSx SINE Alu -21 291 21 193 284 149 27 chr10 36977194 36977268 -108612020 + MIR SINE MIR 19 101 -107 2171 115 0 20 chr10 36977298 36977603 -108611685 + AluSg SINE Alu 1 299 -11 249 245 19 0 chr10 36979847 36979900 -108609388 - MIR3 SINE MIR -4 204 151 378 354 42 7 chr10 36980112 36980256 -108609032 - MIR3 SINE MIR -45 163 15 220 132 92 0 chr10 36981322 36981398 -108607890 + (TATATG)n Simple_repeat Simple_repeat 2 84 0 1628 192 94 41 chr10 36982037 36982527 -108606761 - Charlie1b DNA MER1_type -1 522 7 210 191 0 21 chr10 36984593 36984640 -108604648 + (TATATG)n Simple_repeat Simple_repeat 3 48 0 226 260 21 31 chr10 36984951 36985047 -108604241 + L1MC5 LINE L1 7832 7926 -35 714 197 120 0 chr10 36985118 36985260 -108604028 + MER58B DNA MER1_type 178 336 -5 180 111 0 0 chr10 36985804 36985831 -108603457 + (A)n Simple_repeat Simple_repeat 1 27 0 26 30 0 0 chr10 36988075 36988108 -108601180 + AT_rich Low_complexity Low_complexity 1 33 0 26 30 0 0 chr10 36988895 36988928 -108600360 + AT_rich Low_complexity Low_complexity 1 33 0 301 308 58 10 chr10 36989432 36989536 -108599752 - L2 LINE L2 -8 3264 3156 1139 63 0 0 chr10 36990701 36990844 -108598444 + AluY SINE Alu 169 311 0 191 388 24 0 chr10 36993447 36993532 -108595756 + MIR SINE MIR 44 130 -78 234 403 54 68 chr10 36993699 36993977 -108595311 - L2 LINE L2 -86 3186 2913 2108 135 3 0 chr10 36995728 36996039 -108593249 - AluSx SINE Alu 0 312 1 260 250 44 0 chr10 36996641 36996709 -108592579 + MIR3 SINE MIR 117 187 -21 281 309 73 41 chr10 36998377 36998500 -108590788 + L2 LINE L2 3146 3272 0 21 36 0 0 chr10 36999299 36999327 -108589961 + AT_rich Low_complexity Low_complexity 1 28 0 261 0 0 0 chr10 37001038 37001067 -108588221 + (A)n Simple_repeat Simple_repeat 1 29 0 1944 97 45 0 chr10 37001820 37002087 -108587201 + AluSg SINE Alu 1 279 -31 268 313 28 56 chr10 37003289 37003433 -108585855 + MIR3 SINE MIR 66 205 -3 9723 75 14 33 chr10 37003786 37005221 -108584067 + SVA Other Other 9 1417 0 1771 57 0 5 chr10 37005639 37005849 -108583439 + AluY SINE Alu 87 295 -16 386 328 117 38 chr10 37006116 37006511 -108582777 - L2 LINE L2 -354 2960 2515 1530 184 31 31 chr10 37006511 37006805 -108582483 + AluJb SINE Alu 1 294 -18 386 328 117 38 chr10 37006805 37006915 -108582373 - L2 LINE L2 -799 2515 2415 2292 90 10 3 chr10 37007108 37007409 -108581879 + AluSg SINE Alu 5 307 -3 567 169 153 0 chr10 37007729 37007847 -108581441 + FLAM_C SINE Alu 3 138 -5 412 262 0 0 chr10 37008808 37008892 -108580396 + L2 LINE L2 3225 3308 -5 826 194 12 12 chr10 37010004 37010164 -108579124 + AluJb SINE Alu 137 296 -16 202 306 14 14 chr10 37011226 37011298 -108577990 - MIR SINE MIR -7 255 184 21 0 0 0 chr10 37012074 37012095 -108577193 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 37013288 37013316 -108575972 + AT_rich Low_complexity Low_complexity 1 28 0 189 250 0 0 chr10 37014255 37014295 -108574993 + L2 LINE L2 3218 3257 -15 803 144 0 0 chr10 37015585 37015703 -108573585 + AluJb SINE Alu 1 118 -194 469 339 14 79 chr10 37015838 37016003 -108573285 + MIR SINE MIR 1 175 -87 1518 148 65 15 chr10 37016003 37016266 -108573022 + AluJo SINE Alu 1 276 -36 375 41 0 0 chr10 37016269 37016318 -108572970 + (CA)n Simple_repeat Simple_repeat 1 49 0 469 339 14 79 chr10 37016318 37016425 -108572863 + MIR SINE MIR 177 259 -3 21 36 0 0 chr10 37016605 37016633 -108572655 + AT_rich Low_complexity Low_complexity 1 28 0 826 244 159 26 chr10 37016826 37017166 -108572122 - LTR40b LTR ERVL -4 458 74 253 272 243 40 chr10 37017455 37017731 -108571557 + HAL1 LINE L1 1610 1941 -566 571 237 0 8 chr10 37017761 37017892 -108571396 - FLAM_A SINE Alu -3 130 1 600 278 101 6 chr10 37017959 37018304 -108570984 + HAL1 LINE L1 1987 2364 -143 1138 147 0 6 chr10 37018885 37019055 -108570233 + FRAM SINE Alu 1 168 -8 26 30 0 0 chr10 37019315 37019348 -108569940 + AT_rich Low_complexity Low_complexity 1 33 0 23 68 0 0 chr10 37019469 37019513 -108569775 + AT_rich Low_complexity Low_complexity 1 44 0 35 54 0 0 chr10 37020037 37020093 -108569195 + AT_rich Low_complexity Low_complexity 1 56 0 620 264 45 0 chr10 37021144 37021299 -108567989 + MIR SINE MIR 91 252 -10 25 0 0 0 chr10 37021540 37021565 -108567723 + AT_rich Low_complexity Low_complexity 1 25 0 2030 204 24 20 chr10 37021872 37022332 -108566956 + LTR40b LTR ERVL 1 462 0 1536 223 99 47 chr10 37022484 37022932 -108566356 + MLT2B1 LTR ERVL 2 480 -40 447 19 0 0 chr10 37022932 37022984 -108566304 + (TAGA)n Simple_repeat Simple_repeat 1 52 0 1536 223 99 47 chr10 37022984 37023028 -108566260 + MLT2B1 LTR ERVL 480 520 0 396 0 0 0 chr10 37023119 37023163 -108566125 + (TG)n Simple_repeat Simple_repeat 2 45 0 1693 180 3 7 chr10 37023172 37023461 -108565827 - AluJo SINE Alu -24 288 1 333 0 0 0 chr10 37024344 37024381 -108564907 + (CA)n Simple_repeat Simple_repeat 2 38 0 1014 188 0 51 chr10 37025189 37025386 -108563902 + AluJo SINE Alu 85 271 -41 299 64 0 43 chr10 37025386 37025433 -108563855 + AluJo SINE Alu 249 293 -9 869 117 16 0 chr10 37025735 37025863 -108563425 + FLAM_C SINE Alu 1 130 -3 480 180 238 0 chr10 37025879 37026001 -108563287 + L1MA4A LINE L1 6109 6259 -44 24 53 0 0 chr10 37026005 37026043 -108563245 + AT_rich Low_complexity Low_complexity 1 38 0 435 246 109 0 chr10 37026401 37026511 -108562777 + MER63A DNA MER1_type 52 173 -37 750 183 63 34 chr10 37028034 37028209 -108561079 + LTR8 LTR ERV1 1 180 -511 1032 199 112 52 chr10 37028214 37028500 -108560788 + LTR8A LTR ERV1 425 727 0 21 36 0 0 chr10 37029111 37029139 -108560149 + AT_rich Low_complexity Low_complexity 1 28 0 27 29 0 0 chr10 37029353 37029387 -108559901 + AT_rich Low_complexity Low_complexity 1 34 0 1683 181 7 0 chr10 37029390 37029672 -108559616 - AluJo SINE Alu -27 285 2 1784 170 0 17 chr10 37029981 37030275 -108559013 - AluJo SINE Alu -23 289 1 2241 116 3 0 chr10 37030434 37030737 -108558551 + AluSx SINE Alu 1 304 -8 183 80 0 0 chr10 37031140 37031165 -108558123 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 950 219 0 35 chr10 37031165 37031366 -108557922 - AluJb SINE Alu -32 280 87 256 336 45 15 chr10 37031374 37031508 -108557780 - L1MC/D LINE L1 -1991 5817 5680 1609 184 20 7 chr10 37032092 37032385 -108556903 + AluJo SINE Alu 1 297 -15 65 66 0 0 chr10 37032487 37032608 -108556680 + AT_rich Low_complexity Low_complexity 1 121 0 2104 82 0 72 chr10 37033011 37033315 -108555973 + AluY SINE Alu 1 282 -29 189 0 0 0 chr10 37033321 37033342 -108555946 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 1494 192 11 4 chr10 37033510 37033786 -108555502 - AluJb SINE Alu -10 302 25 1838 147 7 20 chr10 37035450 37035749 -108553539 - AluJo SINE Alu -17 295 1 437 281 92 42 chr10 37035991 37036367 -108552921 + L1ME4a LINE L1 5467 5864 -257 2054 141 3 0 chr10 37036600 37036898 -108552390 - AluSx SINE Alu -8 304 6 1389 148 145 42 chr10 37037162 37037494 -108551794 + MER47A DNA MER2_type 1 366 0 21 57 0 0 chr10 37037757 37037792 -108551496 + AT_rich Low_complexity Low_complexity 1 35 0 515 189 123 49 chr10 37038093 37038305 -108550983 + L1MC4 LINE L1 7345 7444 -341 2106 85 4 4 chr10 37038439 37038711 -108550577 + AluSc SINE Alu 1 272 -37 198 71 0 0 chr10 37038715 37038743 -108550545 + (CA)n Simple_repeat Simple_repeat 1 28 0 1427 150 21 4 chr10 37038986 37039219 -108550069 + AluSx SINE Alu 1 237 -75 2430 80 0 0 chr10 37039406 37039706 -108549582 + AluY SINE Alu 1 300 -11 198 0 0 0 chr10 37039855 37039877 -108549411 + (A)n Simple_repeat Simple_repeat 1 22 0 249 318 192 20 chr10 37040092 37040203 -108549085 + MIR SINE MIR 27 118 -144 1281 108 99 19 chr10 37040203 37040315 -108548973 - MER30 DNA MER1_type 0 230 128 438 20 0 0 chr10 37040315 37040366 -108548922 + (TTTA)n Simple_repeat Simple_repeat 3 53 0 1281 108 99 19 chr10 37040366 37040466 -108548822 - MER30 DNA MER1_type -102 128 1 249 318 192 20 chr10 37040466 37040552 -108548736 + MIR SINE MIR 118 258 -4 725 141 107 0 chr10 37041461 37041582 -108547706 - AluJo SINE Alu -178 134 1 360 0 0 0 chr10 37041823 37041863 -108547425 + (TG)n Simple_repeat Simple_repeat 2 41 0 301 290 0 0 chr10 37042044 37042137 -108547151 - L1M4 LINE L1 -1313 4833 4741 417 131 263 10 chr10 37042433 37042532 -108546756 + AluJb SINE Alu 189 312 0 26 88 0 0 chr10 37044833 37044901 -108544387 + AT_rich Low_complexity Low_complexity 1 68 0 31 0 0 0 chr10 37045404 37045435 -108543853 + AT_rich Low_complexity Low_complexity 1 31 0 378 0 0 0 chr10 37046068 37046110 -108543178 + (CA)n Simple_repeat Simple_repeat 2 43 0 1901 133 59 0 chr10 37048342 37048628 -108540660 + AluSg SINE Alu 1 303 -7 708 177 46 0 chr10 37048666 37048796 -108540492 + AluJo SINE Alu 1 136 -176 22 0 0 0 chr10 37048796 37048818 -108540470 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr10 37051218 37051240 -108538048 + AT_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr10 37052349 37052378 -108536910 + AT_rich Low_complexity Low_complexity 1 29 0 1378 200 65 0 chr10 37052667 37053005 -108536283 + AluJo SINE Alu 3 359 0 198 0 0 0 chr10 37054406 37054428 -108534860 + (CA)n Simple_repeat Simple_repeat 2 23 0 2173 113 0 19 chr10 37056132 37056442 -108532846 - AluSq SINE Alu 0 313 10 21 0 0 0 chr10 37057133 37057154 -108532134 + AT_rich Low_complexity Low_complexity 1 21 0 2222 91 20 0 chr10 37057556 37057852 -108531436 + AluSp SINE Alu 1 302 -11 22 35 0 0 chr10 37058274 37058303 -108530985 + AT_rich Low_complexity Low_complexity 1 29 0 1453 158 66 18 chr10 37058438 37058710 -108530578 - AluJo SINE Alu -22 290 6 234 0 0 0 chr10 37060255 37060281 -108529007 + (A)n Simple_repeat Simple_repeat 1 26 0 286 271 181 23 chr10 37061483 37061660 -108527628 - MIR SINE MIR -34 228 24 1683 150 78 14 chr10 37062889 37063182 -108526106 + AluJb SINE Alu 1 312 0 23 33 0 0 chr10 37063184 37063214 -108526074 + AT_rich Low_complexity Low_complexity 1 30 0 510 257 280 0 chr10 37063940 37064115 -108525173 + MER58A DNA MER1_type 1 224 0 1588 179 38 3 chr10 37064313 37064603 -108524685 + AluJb SINE Alu 1 300 -12 691 186 0 0 chr10 37064624 37064742 -108524546 + FLAM_C SINE Alu 1 118 -15 2346 87 3 3 chr10 37064852 37065150 -108524138 - AluSc SINE Alu -11 298 1 1329 127 0 0 chr10 37065152 37065341 -108523947 - AluSq SINE Alu -124 189 1 1702 205 0 3 chr10 37065344 37065641 -108523647 - AluJb SINE Alu -16 296 1 1992 140 0 3 chr10 37066059 37066351 -108522937 - AluSx SINE Alu -21 291 1 2910 13 0 0 chr10 37066709 37067027 -108522261 + AluYb8 SINE Alu 1 318 0 1909 147 40 0 chr10 37067221 37067521 -108521767 + AluSx SINE Alu 1 312 0 288 340 85 7 chr10 37068153 37068294 -108520994 + L2 LINE L2 3116 3267 -5 224 29 0 29 chr10 37070609 37070643 -108518645 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 619 191 0 0 chr10 37071303 37071408 -108517880 - FLAM_A SINE Alu -16 126 22 1683 150 78 14 chr10 37125300 37125593 -108463695 + AluJb SINE Alu 1 312 0 23 33 0 0 chr10 37125595 37125625 -108463663 + AT_rich Low_complexity Low_complexity 1 30 0 510 257 280 0 chr10 37126351 37126526 -108462762 + MER58A DNA MER1_type 1 224 0 1588 179 38 3 chr10 37126724 37127014 -108462274 + AluJb SINE Alu 1 300 -12 691 186 0 0 chr10 37127035 37127153 -108462135 + FLAM_C SINE Alu 1 118 -15 2346 87 3 3 chr10 37127263 37127561 -108461727 - AluSc SINE Alu -11 298 1 1329 127 0 0 chr10 37127563 37127752 -108461536 - AluSq SINE Alu -124 189 1 1717 202 0 3 chr10 37127755 37128052 -108461236 - AluJb SINE Alu -16 296 1 2056 138 0 0 chr10 37128470 37128761 -108460527 - AluSx SINE Alu -21 291 1 2822 22 0 0 chr10 37128985 37129299 -108459989 + AluYb8 SINE Alu 4 317 -1 1909 147 40 0 chr10 37129493 37129793 -108459495 + AluSx SINE Alu 1 312 0 287 319 92 14 chr10 37130425 37130566 -108458722 + L2 LINE L2 3116 3267 -5 224 29 0 29 chr10 37132881 37132915 -108456373 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 627 191 0 0 chr10 37133575 37133680 -108455608 - FLAM_A SINE Alu -16 126 22 189 250 0 0 chr10 37136480 37136520 -108452768 + L2 LINE L2 3218 3257 -15 803 144 0 0 chr10 37137810 37137928 -108451360 + AluJb SINE Alu 1 118 -194 469 339 14 79 chr10 37138063 37138228 -108451060 + MIR SINE MIR 1 175 -87 1518 148 65 15 chr10 37138228 37138491 -108450797 + AluJo SINE Alu 1 276 -36 375 41 0 0 chr10 37138494 37138543 -108450745 + (CA)n Simple_repeat Simple_repeat 1 49 0 469 339 14 79 chr10 37138543 37138650 -108450638 + MIR SINE MIR 177 259 -3 21 36 0 0 chr10 37138830 37138858 -108450430 + AT_rich Low_complexity Low_complexity 1 28 0 826 244 159 26 chr10 37139051 37139391 -108449897 - LTR40b LTR ERVL -4 458 74 253 272 243 40 chr10 37139680 37139956 -108449332 + HAL1 LINE L1 1610 1941 -566 571 237 0 8 chr10 37139986 37140117 -108449171 - FLAM_A SINE Alu -3 130 1 600 278 101 6 chr10 37140184 37140529 -108448759 + HAL1 LINE L1 1987 2364 -143 1138 147 0 6 chr10 37141111 37141281 -108448007 + FRAM SINE Alu 1 168 -8 26 30 0 0 chr10 37141541 37141574 -108447714 + AT_rich Low_complexity Low_complexity 1 33 0 23 68 0 0 chr10 37141695 37141739 -108447549 + AT_rich Low_complexity Low_complexity 1 44 0 35 54 0 0 chr10 37142302 37142358 -108446930 + AT_rich Low_complexity Low_complexity 1 56 0 620 264 45 0 chr10 37143409 37143564 -108445724 + MIR SINE MIR 91 252 -10 25 0 0 0 chr10 37143805 37143830 -108445458 + AT_rich Low_complexity Low_complexity 1 25 0 2030 204 24 20 chr10 37144137 37144597 -108444691 + LTR40b LTR ERVL 1 462 0 1536 223 99 47 chr10 37144749 37145197 -108444091 + MLT2B1 LTR ERVL 2 480 -40 447 19 0 0 chr10 37145197 37145249 -108444039 + (TAGA)n Simple_repeat Simple_repeat 1 52 0 1536 223 99 47 chr10 37145249 37145293 -108443995 + MLT2B1 LTR ERVL 480 520 0 291 71 0 0 chr10 37145384 37145426 -108443862 + (TG)n Simple_repeat Simple_repeat 2 43 0 1669 189 4 0 chr10 37145443 37145724 -108443564 - AluJo SINE Alu -30 282 1 333 0 0 0 chr10 37146607 37146644 -108442644 + (CA)n Simple_repeat Simple_repeat 2 38 0 1014 188 0 51 chr10 37147451 37147648 -108441640 + AluJo SINE Alu 85 271 -41 299 64 0 43 chr10 37147648 37147695 -108441593 + AluJo SINE Alu 249 293 -9 869 117 16 0 chr10 37147997 37148125 -108441163 + FLAM_C SINE Alu 1 130 -3 480 180 238 0 chr10 37148141 37148263 -108441025 + L1MA4A LINE L1 6109 6259 -44 24 53 0 0 chr10 37148267 37148305 -108440983 + AT_rich Low_complexity Low_complexity 1 38 0 435 246 109 0 chr10 37148663 37148773 -108440515 + MER63A DNA MER1_type 52 173 -37 750 183 63 34 chr10 37150296 37150471 -108438817 + LTR8 LTR ERV1 1 180 -511 1052 196 112 52 chr10 37150476 37150762 -108438526 + LTR8A LTR ERV1 425 727 0 21 36 0 0 chr10 37151373 37151401 -108437887 + AT_rich Low_complexity Low_complexity 1 28 0 27 29 0 0 chr10 37151615 37151649 -108437639 + AT_rich Low_complexity Low_complexity 1 34 0 1697 177 7 0 chr10 37151652 37151934 -108437354 - AluJo SINE Alu -27 285 2 1784 170 0 17 chr10 37152243 37152537 -108436751 - AluJo SINE Alu -23 289 1 2241 116 3 0 chr10 37152697 37153000 -108436288 + AluSx SINE Alu 1 304 -8 183 80 0 0 chr10 37153403 37153428 -108435860 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 950 214 0 35 chr10 37153428 37153629 -108435659 - AluJo SINE Alu -32 280 87 256 336 45 15 chr10 37153637 37153771 -108435517 - L1MC/D LINE L1 -1991 5817 5680 1557 194 20 7 chr10 37154355 37154648 -108434640 + AluJo SINE Alu 1 297 -15 65 66 0 0 chr10 37154750 37154871 -108434417 + AT_rich Low_complexity Low_complexity 1 121 0 764 310 45 50 chr10 37155120 37155517 -108433771 - L2 LINE L2 0 3313 2919 355 312 101 30 chr10 37155606 37155805 -108433483 + MIR SINE MIR 2 214 -48 5262 143 23 48 chr10 37155830 37157055 -108432233 + L1MA8 LINE L1 5089 6285 -6 1996 110 11 7 chr10 37157969 37158274 -108431014 - AluSx SINE Alu 0 306 1 1604 142 77 4 chr10 37158876 37159137 -108430151 - AluJo SINE Alu -13 299 20 5323 133 53 46 chr10 37160252 37161316 -108427972 + MER11C LTR ERVK 1 1071 0 716 221 0 0 chr10 37161829 37161956 -108427332 + FLAM_A SINE Alu 1 127 -6 1618 199 0 22 chr10 37162849 37163013 -108426275 - AluJo SINE Alu -7 305 139 384 40 0 0 chr10 37163013 37163063 -108426225 + (TTTTG)n Simple_repeat Simple_repeat 2 51 0 2031 125 0 4 chr10 37163064 37163344 -108425944 - AluSg SINE Alu -31 279 1 1618 199 0 22 chr10 37163344 37163489 -108425799 - AluJo SINE Alu -172 140 1 248 312 72 8 chr10 37164015 37164140 -108425148 - MIR SINE MIR -64 198 66 2270 107 7 3 chr10 37164918 37165227 -108424061 + AluSq SINE Alu 1 310 -3 2481 66 23 0 chr10 37165228 37165531 -108423757 + AluY SINE Alu 2 311 0 375 23 0 0 chr10 37165792 37165836 -108423452 + (CA)n Simple_repeat Simple_repeat 1 44 0 232 310 58 0 chr10 37167776 37167863 -108421425 - MIR SINE MIR -11 251 160 203 327 20 52 chr10 37168066 37168219 -108421069 - L2 LINE L2 -656 2658 2511 22 0 0 0 chr10 37168420 37168442 -108420846 + AT_rich Low_complexity Low_complexity 1 22 0 492 285 141 47 chr10 37169911 37170528 -108418760 + L1MC4a LINE L1 5499 6173 -1635 196 222 0 0 chr10 37172672 37172708 -108416580 - L2 LINE L2 -1897 1417 1382 1936 129 11 7 chr10 37172912 37173192 -108416096 - AluSx SINE Alu -7 305 25 22 0 0 0 chr10 37175244 37175266 -108414022 + AT_rich Low_complexity Low_complexity 1 22 0 1569 185 16 38 chr10 37176049 37176363 -108412925 + AluJo SINE Alu 4 310 -2 2193 113 16 38 chr10 37176841 37177213 -108412075 - THE1B LTR MaLR 0 364 1 518 302 94 5 chr10 37179817 37180019 -108409269 - MIR SINE MIR -18 244 25 21 0 0 0 chr10 37180142 37180163 -108409125 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr10 37180423 37180448 -108408840 + AT_rich Low_complexity Low_complexity 1 25 0 3794 168 15 72 chr10 37180554 37180659 -108408629 + L1MA9 LINE L1 5384 5493 -819 2089 145 6 3 chr10 37180659 37180970 -108408318 + AluSx SINE Alu 1 312 0 2117 125 0 16 chr10 37180980 37181285 -108408003 + AluSc SINE Alu 1 300 -9 3794 168 15 72 chr10 37181285 37181591 -108407697 + L1MA9 LINE L1 5502 5824 -488 276 30 0 0 chr10 37181591 37181624 -108407664 + (TG)n Simple_repeat Simple_repeat 2 34 0 3794 168 15 72 chr10 37181624 37181977 -108407311 + L1MA9 LINE L1 5824 6196 -116 1576 180 10 37 chr10 37181977 37182268 -108407020 + AluJo SINE Alu 1 285 -27 180 0 0 0 chr10 37182268 37182288 -108407000 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 3794 168 15 72 chr10 37182296 37182378 -108406910 + L1MA9 LINE L1 6196 6184 -128 2463 61 3 0 chr10 37182378 37182675 -108406613 - AluY SINE Alu -12 299 2 3794 168 15 72 chr10 37182675 37182799 -108406489 + L1MA9 LINE L1 6183 6312 0 1228 48 0 24 chr10 37182911 37183078 -108406210 + L1PA4 LINE L1 5993 6155 0 456 249 40 49 chr10 37185637 37185946 -108403342 + L1MC4 LINE L1 6977 7217 -744 225 337 30 30 chr10 37186393 37186559 -108402729 + L2 LINE L2 2565 2730 -584 219 286 54 0 chr10 37186694 37186750 -108402538 + L2 LINE L2 3002 3060 -212 259 50 50 0 chr10 37188962 37189002 -108400286 - Alu SINE Alu -12 289 248 2318 94 0 3 chr10 37189758 37190057 -108399231 - AluSq SINE Alu -15 298 1 1705 201 7 0 chr10 37191060 37191358 -108397930 - AluJb SINE Alu -12 300 1 1966 160 0 16 chr10 37191649 37191962 -108397326 - AluJo SINE Alu -4 308 1 449 245 0 9 chr10 37191982 37192088 -108397200 + FRAM SINE Alu 56 160 -16 2358 66 0 16 chr10 37192625 37192930 -108396358 - AluY SINE Alu -11 300 1 24 32 0 0 chr10 37193140 37193171 -108396117 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr10 37193193 37193222 -108396066 + AT_rich Low_complexity Low_complexity 1 29 0 341 275 24 97 chr10 37193930 37194011 -108395277 + MIR SINE MIR 71 156 -106 2477 68 3 0 chr10 37194011 37194321 -108394967 + AluY SINE Alu 1 311 0 341 275 24 97 chr10 37194321 37194446 -108394842 + MIR SINE MIR 156 262 0 21 0 0 0 chr10 37194740 37194761 -108394527 + AT_rich Low_complexity Low_complexity 1 21 0 2294 100 0 3 chr10 37194782 37195091 -108394197 + AluSx SINE Alu 1 308 -4 1427 183 52 17 chr10 37196025 37196315 -108392973 + AluJb SINE Alu 4 303 -9 210 222 44 0 chr10 37196317 37196362 -108392926 + polypurine Low_complexity Low_complexity 4 50 0 544 197 14 50 chr10 37196363 37196682 -108392606 + GA-rich Low_complexity Low_complexity 1 307 0 384 184 15 55 chr10 37197159 37197430 -108391858 + GA-rich Low_complexity Low_complexity 1 260 0 1823 156 47 26 chr10 37197732 37198072 -108391216 + MER7A DNA MER2_type 1 345 -1 211 171 110 98 chr10 37198217 37198299 -108390989 + MER5A DNA MER1_type 103 185 -4 369 225 17 81 chr10 37198475 37198648 -108390640 + L1ME LINE L1 5588 5749 -372 1710 184 9 26 chr10 37198921 37199268 -108390020 + MER2 DNA MER2_type 1 341 -3 341 302 102 36 chr10 37201125 37201350 -108387938 + L1ME4a LINE L1 5683 5922 -199 297 0 0 0 chr10 37201350 37201383 -108387905 + (TG)n Simple_repeat Simple_repeat 2 34 0 1551 201 11 0 chr10 37201487 37201792 -108387496 + AluJb SINE Alu 1 308 0 180 194 0 0 chr10 37202995 37203031 -108386257 - L2 LINE L2 0 3313 3278 1915 153 7 0 chr10 37203135 37203429 -108385859 - AluSx SINE Alu -16 296 1 575 321 72 9 chr10 37204471 37204692 -108384596 + MIR SINE MIR 14 248 -14 996 132 26 5 chr10 37204841 37205031 -108384257 + L1MA4 LINE L1 6096 6289 -11 2023 118 0 14 chr10 37205591 37205879 -108383409 - AluSx SINE Alu -28 284 1 29 0 0 0 chr10 37207235 37207264 -108382024 + AT_rich Low_complexity Low_complexity 1 29 0 863 173 0 0 chr10 37207425 37207558 -108381730 + AluJ SINE Alu 1 133 -169 853 180 0 56 chr10 37207559 37207601 -108381687 + AluJ SINE Alu 129 172 -140 2335 185 41 2 chr10 37207601 37208065 -108381223 + MER66B LTR ERV1 5 486 0 853 180 0 56 chr10 37208065 37208183 -108381105 + AluJ SINE Alu 172 280 -32 222 222 0 0 chr10 37208644 37208689 -108380599 - MIR SINE MIR -63 145 101 4220 207 102 30 chr10 37209066 37210027 -108379261 - Charlie1a DNA MER1_type -1306 1455 365 637 224 0 8 chr10 37210027 37210161 -108379127 + FLAM_A SINE Alu 1 133 0 4220 207 102 30 chr10 37210161 37210555 -108378733 - Charlie1a DNA MER1_type -2396 365 1 202 303 45 0 chr10 37210564 37210653 -108378635 + MIR3 SINE MIR 85 177 -31 2198 87 4 0 chr10 37212572 37212847 -108376441 - AluSp SINE Alu -21 292 17 273 224 172 30 chr10 37213042 37213176 -108376112 + L1MD1 LINE L1 6069 6221 -21 2411 65 0 20 chr10 37213181 37213487 -108375801 - AluY SINE Alu -11 300 1 1549 194 7 13 chr10 37214260 37214559 -108374729 - AluJb SINE Alu -15 297 1 765 122 28 126 chr10 37214759 37214811 -108374477 - L1PA15 LINE L1 -2 6163 6107 2339 103 3 0 chr10 37214811 37215122 -108374166 - AluSx SINE Alu 0 312 1 765 122 28 126 chr10 37215122 37215217 -108374071 - L1PA15 LINE L1 -58 6107 6041 243 0 0 0 chr10 37215217 37215244 -108374044 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 765 122 28 126 chr10 37215244 37215309 -108373979 - L1PA15 LINE L1 -124 6041 5971 1385 162 6 106 chr10 37215864 37216045 -108373243 - AluJo SINE Alu -23 289 152 1767 179 10 0 chr10 37216045 37216352 -108372936 - AluJo SINE Alu -2 310 1 1385 162 6 106 chr10 37216352 37216491 -108372797 - AluJo SINE Alu -160 152 1 21 0 0 0 chr10 37216867 37216888 -108372400 + AT_rich Low_complexity Low_complexity 1 21 0 2252 95 0 23 chr10 37216892 37217197 -108372091 + AluSp SINE Alu 6 303 -10 1802 154 0 4 chr10 37217254 37217533 -108371755 + AluJb SINE Alu 35 312 0 290 325 0 0 chr10 37217651 37217731 -108371557 + L2 LINE L2 3192 3271 -42 2459 248 45 2 chr10 37217742 37218363 -108370925 + MER82 DNA MER2_type 1 648 -5 224 29 0 29 chr10 37218534 37218568 -108370720 + (TTG)n Simple_repeat Simple_repeat 2 34 0 248 373 0 0 chr10 37218632 37218707 -108370581 - L2 LINE L2 -65 3207 3133 3436 147 104 42 chr10 37219033 37219076 -108370212 - MER4D LTR ERV1 -6 863 824 2152 118 0 0 chr10 37219076 37219372 -108369916 + AluSx SINE Alu 1 296 -16 3436 147 104 42 chr10 37219372 37219939 -108369349 - MER4D LTR ERV1 -45 824 177 1845 150 21 0 chr10 37219939 37220226 -108369062 - AluJo SINE Alu -7 305 13 3436 147 104 42 chr10 37220226 37220415 -108368873 - MER4D LTR ERV1 -692 177 1 248 316 40 42 chr10 37220455 37220662 -108368626 - L2 LINE L2 -280 2992 2791 305 217 60 60 chr10 37220717 37220800 -108368488 - MER5A DNA MER1_type -89 100 18 219 158 35 18 chr10 37220840 37220897 -108368391 + (TA)n Simple_repeat Simple_repeat 1 58 0 22 0 0 0 chr10 37221840 37221862 -108367426 + AT_rich Low_complexity Low_complexity 1 22 0 962 159 0 0 chr10 37222330 37222487 -108366801 - AluJb SINE Alu -2 310 154 1411 132 5 32 chr10 37223077 37223297 -108365991 + AluSx SINE Alu 1 214 -98 560 295 19 78 chr10 37223776 37224044 -108365244 - MIR SINE MIR -2 260 9 216 67 0 0 chr10 37224412 37224442 -108364846 + (GA)n Simple_repeat Simple_repeat 2 31 0 330 127 0 18 chr10 37224559 37224614 -108364674 - Alu SINE Alu -248 54 1 475 268 57 25 chr10 37224830 37224987 -108364301 - MER5B DNA MER1_type -2 176 15 360 162 44 0 chr10 37225062 37225130 -108364158 - MER5A DNA MER1_type -77 112 42 252 258 0 0 chr10 37225157 37225223 -108364065 - Charlie5 DNA MER1_type -2529 83 18 1256 218 61 41 chr10 37227378 37227471 -108361817 - MER63B DNA MER1_type -642 420 330 2311 128 0 0 chr10 37227471 37227783 -108361505 + AluSq SINE Alu 1 312 -1 1256 218 61 41 chr10 37227783 37228101 -108361187 - MER63B DNA MER1_type -732 330 1 317 224 87 22 chr10 37228584 37228767 -108360521 - Charlie7 DNA MER1_type 0 2612 2418 1408 244 74 95 chr10 37229573 37229942 -108359346 + L1MC5 LINE L1 6694 7069 -892 1840 164 16 19 chr10 37229942 37230253 -108359035 + AluJb SINE Alu 1 310 -2 1408 244 74 95 chr10 37230253 37231065 -108358223 + L1MC5 LINE L1 7069 7850 -111 1173 164 5 5 chr10 37231308 37231516 -108357772 - MER2 DNA MER2_type -135 210 3 1979 162 0 7 chr10 37232516 37232824 -108356464 + AluSx SINE Alu 3 308 -4 1627 171 89 0 chr10 37233808 37234123 -108355165 + MER2 DNA MER2_type 1 343 -1 1860 124 4 4 chr10 37234481 37234739 -108354549 + AluSx SINE Alu 1 258 -54 208 180 20 0 chr10 37234748 37234798 -108354490 + A-rich Low_complexity Low_complexity 4 54 0 1871 165 104 15 chr10 37235155 37235548 -108353740 + MSTA LTR MaLR 1 428 0 1197 200 79 110 chr10 37235718 37235863 -108353425 + MLT1D LTR MaLR 1 149 -356 1324 205 76 6 chr10 37235863 37236204 -108353084 + MLT1A1 LTR MaLR 1 365 0 1197 200 79 110 chr10 37236204 37236578 -108352710 + MLT1D LTR MaLR 149 504 -1 446 221 177 0 chr10 37236681 37236794 -108352494 + FLAM_A SINE Alu 1 133 0 1391 167 59 38 chr10 37238156 37238443 -108350845 - AluJo SINE Alu -19 293 1 1914 149 30 0 chr10 37239872 37240174 -108349114 + AluSx SINE Alu 1 311 -1 186 71 0 0 chr10 37241562 37241590 -108347698 + (A)n Simple_repeat Simple_repeat 1 28 0 464 165 10 19 chr10 37243449 37243552 -108345736 - ORSL DNA AcHobo -33 242 141 314 213 21 53 chr10 37243658 37243752 -108345536 - ORSL DNA AcHobo -184 91 1 715 245 0 19 chr10 37243942 37244150 -108345138 + Charlie2 DNA MER1_type 1881 2084 -778 * 1378 186 10 10 chr10 37244146 37244452 -108344836 + MER89 LTR ERV1 254 559 0 252 160 151 28 chr10 37244552 37244658 -108344630 + Charlie2 DNA MER1_type 2443 2561 -301 1234 251 52 26 chr10 37244804 37245341 -108343947 - L1MC5 LINE L1 -173 7788 7238 915 189 11 0 chr10 37245374 37245554 -108343734 - MSTD LTR MaLR 0 396 215 939 205 11 5 chr10 37245750 37245940 -108343348 - AluJb SINE Alu -15 297 107 557 198 0 0 chr10 37246009 37246115 -108343173 - MSTD LTR MaLR -290 106 1 1293 250 73 39 chr10 37246115 37246676 -108342612 - L1MC5 LINE L1 -746 7215 6636 21 0 0 0 chr10 37247106 37247127 -108342161 + AT_rich Low_complexity Low_complexity 1 21 0 2126 103 0 10 chr10 37247310 37247601 -108341687 - AluSg SINE Alu -22 288 1 707 224 99 10 chr10 37247780 37247981 -108341307 - MER20 DNA MER1_type 0 219 1 24 0 0 0 chr10 37249835 37249859 -108339429 + AT_rich Low_complexity Low_complexity 1 24 0 2067 99 31 27 chr10 37249993 37250285 -108339003 - AluSx SINE Alu -19 293 1 218 289 0 0 chr10 37251511 37251563 -108337725 + (TATATG)n Simple_repeat Simple_repeat 1 52 0 4060 206 71 63 chr10 37251639 37251721 -108337567 + L1MC4a LINE L1 6335 6415 -1393 192 40 0 0 chr10 37251721 37251746 -108337542 + (CA)n Simple_repeat Simple_repeat 1 25 0 4060 206 71 63 chr10 37251746 37251887 -108337401 + L1MC4a LINE L1 6415 6553 -1255 2160 138 0 0 chr10 37251887 37252199 -108337089 - AluSx SINE Alu 0 312 1 4060 206 71 63 chr10 37252199 37253436 -108335852 + L1MC4a LINE L1 6553 7808 0 23 68 0 0 chr10 37253436 37253480 -108335808 + AT_rich Low_complexity Low_complexity 1 44 0 2183 109 3 3 chr10 37253552 37253841 -108335447 + AluSx SINE Alu 1 292 -20 756 0 0 0 chr10 37253841 37253925 -108335363 + (CATAA)n Simple_repeat Simple_repeat 2 85 0 2183 109 3 3 chr10 37253925 37253939 -108335349 + AluSx SINE Alu 291 304 -8 806 240 23 27 chr10 37254598 37254819 -108334469 - MER58A DNA MER1_type -1 223 4 227 308 55 75 chr10 37255882 37256028 -108333260 + MIR SINE MIR 5 147 -115 1276 257 57 14 chr10 37256038 37256477 -108332811 + MLT1D LTR MaLR 4 461 -44 2267 112 0 3 chr10 37259843 37260147 -108329141 + AluSc SINE Alu 3 305 -4 197 235 39 0 chr10 37262509 37262560 -108326728 + MIR SINE MIR 73 125 -83 270 0 0 0 chr10 37262568 37262598 -108326690 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 14370 142 59 13 chr10 37263529 37263769 -108325519 - Tigger2 DNA MER2_type 0 2718 2491 2224 121 0 3 chr10 37263769 37264074 -108325214 - AluSx SINE Alu -7 305 2 14370 142 59 13 chr10 37264074 37266429 -108322859 - Tigger2 DNA MER2_type -227 2491 2 1776 165 45 6 chr10 37266888 37267221 -108322067 - MER7A DNA MER2_type 0 346 3 1422 142 0 0 chr10 37267263 37267481 -108321807 + L1PA16 LINE L1 5941 6158 -8 2125 120 7 3 chr10 37267565 37267865 -108321423 + AluSx SINE Alu 1 301 -11 1439 54 0 0 chr10 37268151 37268319 -108320969 + AluY SINE Alu 127 294 -17 370 322 15 16 chr10 37268450 37268608 -108320680 + MIR SINE MIR 18 149 -59 2074 142 0 3 chr10 37268769 37269058 -108320230 + AluSx SINE Alu 1 288 -24 2044 105 49 3 chr10 37269531 37269816 -108319472 - AluSx SINE Alu -14 298 1 21 0 0 0 chr10 37270244 37270265 -108319023 + AT_rich Low_complexity Low_complexity 1 21 0 1473 196 34 14 chr10 37271044 37271335 -108317953 - AluJo SINE Alu -15 297 1 536 65 13 13 chr10 37272131 37272208 -108317080 + Alu SINE Alu 227 303 -8 1108 254 60 3 chr10 37272951 37273266 -108316022 + MER46C DNA MER2_type 1 333 -5 1455 233 48 22 chr10 37273276 37273427 -108315861 - MER63B DNA MER1_type -634 428 283 2083 104 31 3 chr10 37273427 37273716 -108315572 + AluSx SINE Alu 1 297 -15 1455 233 48 22 chr10 37273716 37273976 -108315312 - MER63B DNA MER1_type -779 283 6 402 213 0 0 chr10 37274254 37274329 -108314959 + L2 LINE L2 3238 3312 -1 21 0 0 0 chr10 37274365 37274386 -108314902 + AT_rich Low_complexity Low_complexity 1 21 0 1246 194 0 87 chr10 37274513 37274822 -108314466 + AluJo SINE Alu 1 282 -30 24 0 0 0 chr10 37275089 37275113 -108314175 + AT_rich Low_complexity Low_complexity 1 24 0 969 137 7 0 chr10 37275934 37276080 -108313208 - FRAM SINE Alu -19 147 1 207 0 0 0 chr10 37276243 37276266 -108313022 + (TG)n Simple_repeat Simple_repeat 1 23 0 405 0 0 0 chr10 37276279 37276324 -108312964 + (CA)n Simple_repeat Simple_repeat 2 46 0 1484 271 135 45 chr10 37276449 37276880 -108312408 - HAL1 LINE L1 -948 1559 1168 1603 183 20 20 chr10 37276880 37277180 -108312108 - AluJo SINE Alu -12 300 1 1484 271 135 45 chr10 37277180 37277886 -108311402 - HAL1 LINE L1 -1339 1168 319 825 202 45 6 chr10 37277907 37278085 -108311203 - AluJb SINE Alu -8 304 120 24 54 0 18 chr10 37278085 37278115 -108311173 + AT_rich Low_complexity Low_complexity 1 31 -24 2185 87 11 11 chr10 37278115 37278402 -108310886 - AluSq SINE Alu -26 287 1 24 54 0 18 chr10 37278402 37278427 -108310861 + AT_rich Low_complexity Low_complexity 31 55 0 639 174 43 22 chr10 37278433 37278571 -108310717 - AluJo SINE Alu -81 231 91 518 217 11 0 chr10 37278674 37278766 -108310522 - AluJo SINE Alu -218 94 2 652 297 35 18 chr10 37278799 37279003 -108310285 - HAL1 LINE L1 -2209 298 86 387 0 0 0 chr10 37279003 37279046 -108310242 + (CAA)n Simple_repeat Simple_repeat 2 44 0 652 297 35 18 chr10 37279046 37279127 -108310161 - HAL1 LINE L1 -2421 86 8 2021 137 0 10 chr10 37279390 37279690 -108309598 - AluSx SINE Alu -15 297 1 874 190 0 0 chr10 37280505 37280647 -108308641 - AluJo/FRAM SINE Alu -30 282 141 289 220 0 0 chr10 37280647 37280697 -108308591 - AluJ/monomer SINE Alu -250 50 1 200 91 68 0 chr10 37281011 37281055 -108308233 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 461 267 222 9 chr10 37281301 37281526 -108307762 - L2 LINE L2 -1294 2020 1748 1791 174 7 3 chr10 37281997 37282301 -108306987 + AluJo SINE Alu 1 305 -7 1841 155 3 10 chr10 37282846 37283172 -108306116 - AluJb SINE Alu 0 312 1 1739 159 50 0 chr10 37284588 37284890 -108304398 + L1PB4 LINE L1 5838 6154 -2 1986 130 7 3 chr10 37285076 37285369 -108303919 + AluSx SINE Alu 1 294 -18 209 171 0 0 chr10 37285372 37285407 -108303881 + G-rich Low_complexity Low_complexity 3 37 0 2816 13 0 0 chr10 37285495 37285796 -108303492 + L1PA2 LINE L1 5855 6155 0 680 208 174 17 chr10 37285908 37286149 -108303139 + MER5C DNA MER1_type 43 321 -3 453 118 49 14 chr10 37286424 37286568 -108302720 + (TA)n Simple_repeat Simple_repeat 1 149 0 902 139 0 29 chr10 37286580 37286717 -108302571 - FLAM_C SINE Alu 0 133 1 632 110 0 0 chr10 37287073 37287155 -108302133 + AluSp SINE Alu 142 223 -90 1018 171 77 124 chr10 37287369 37287695 -108301593 + AluJo SINE Alu 1 312 0 195 42 0 0 chr10 37287738 37287762 -108301526 + (TGG)n Simple_repeat Simple_repeat 1 24 0 1581 226 27 0 chr10 37287863 37288199 -108301089 + L1PA16 LINE L1 5821 6165 -1 463 173 189 8 chr10 37288199 37288326 -108300962 - MIR SINE MIR -85 177 28 242 262 64 52 chr10 37289360 37289532 -108299756 + L2 LINE L2 2562 2735 -579 897 117 0 0 chr10 37289569 37289706 -108299582 + (CA)n Simple_repeat Simple_repeat 2 138 0 213 256 0 0 chr10 37289715 37289758 -108299530 + L2 LINE L2 3210 3252 -20 2097 135 0 0 chr10 37290391 37290688 -108298600 - AluSx SINE Alu -15 297 1 2196 123 0 16 chr10 37291248 37291557 -108297731 + AluSq SINE Alu 1 304 -9 2337 107 0 0 chr10 37291561 37291871 -108297417 + AluSx SINE Alu 1 310 -2 1972 144 10 3 chr10 37292641 37292947 -108296341 - AluJb SINE Alu -4 308 1 210 37 0 0 chr10 37294729 37294756 -108294532 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 1453 149 0 0 chr10 37294903 37295111 -108294177 - AluSx SINE Alu -102 210 3 471 215 28 0 chr10 37295136 37295243 -108294045 + L1M4 LINE L1 2664 2773 -3373 1131 159 5 16 chr10 37295800 37295989 -108293299 + AluJo SINE Alu 1 187 -125 4258 188 5 2 chr10 37295990 37296814 -108292474 + L1PA15 LINE L1 4168 4993 -1153 1077 113 7 0 chr10 37296816 37296958 -108292330 + AluSq/x SINE Alu 1 143 -170 838 124 0 0 chr10 37297060 37297173 -108292115 + AluSp/q SINE Alu 181 293 -20 5289 112 60 70 chr10 37297173 37297522 -108291766 + L1PA15 LINE L1 4980 5331 -834 2119 118 7 0 chr10 37297522 37297811 -108291477 + AluSq SINE Alu 1 291 -22 5289 112 60 70 chr10 37297811 37298643 -108290645 + L1PA15 LINE L1 5331 6152 -13 658 121 0 0 chr10 37298655 37298738 -108290550 + AluJb SINE Alu 178 260 -52 23 0 0 0 chr10 37298742 37298765 -108290523 + AT_rich Low_complexity Low_complexity 1 23 0 228 181 0 42 chr10 37299067 37299139 -108290149 + GA-rich Low_complexity Low_complexity 3 71 0 1708 74 28 0 chr10 37299400 37299615 -108289673 - AluY SINE Alu -6 305 85 279 288 68 25 chr10 37299754 37299872 -108289416 - L2 LINE L2 -9 3263 3141 2303 105 0 10 chr10 37300124 37300428 -108288860 + AluSg SINE Alu 1 301 -9 198 103 0 0 chr10 37300489 37300518 -108288770 + (TCC)n Simple_repeat Simple_repeat 2 30 0 282 167 0 0 chr10 37301925 37301985 -108287303 + (CA)n Simple_repeat Simple_repeat 2 61 0 392 248 23 70 chr10 37302351 37302480 -108286808 + MER5A DNA MER1_type 58 180 -9 1105 188 39 0 chr10 37303033 37303241 -108286047 + MER20 DNA MER1_type 2 217 -2 826 166 0 14 chr10 37303878 37304023 -108285265 + AluJb SINE Alu 163 305 -7 774 139 39 0 chr10 37305264 37305393 -108283895 + MER5A DNA MER1_type 1 134 -55 299 320 51 26 chr10 37305296 37305452 -108283836 - MER5A DNA MER1_type -23 166 7 * 203 274 80 44 chr10 37305497 37305610 -108283678 - MIR SINE MIR -43 219 103 2188 106 0 10 chr10 37306293 37306585 -108282703 - AluSx SINE Alu -23 289 1 21 71 0 0 chr10 37306784 37306826 -108282462 + AT_rich Low_complexity Low_complexity 1 42 0 2117 119 0 3 chr10 37306963 37307256 -108282032 + AluSg SINE Alu 1 292 -18 1749 166 0 33 chr10 37308937 37309239 -108280049 + AluSx SINE Alu 4 295 -17 207 0 0 0 chr10 37310213 37310236 -108279052 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1681 152 39 7 chr10 37310957 37311240 -108278048 - AluJo SINE Alu -20 292 1 1355 174 52 7 chr10 37312857 37313127 -108276161 - AluJo SINE Alu -30 282 1 2121 125 0 20 chr10 37313153 37313457 -108275831 + AluSq SINE Alu 1 298 -15 379 81 210 0 chr10 37313588 37313650 -108275638 + MADE1 DNA Mariner 6 80 0 2011 158 33 6 chr10 37315684 37316020 -108273268 + L1MC1 LINE L1 5979 6323 -10 2492 81 0 0 chr10 37317101 37317409 -108271879 - AluY SINE Alu -3 308 1 228 385 37 9 chr10 37317968 37318077 -108271211 + L2 LINE L2 3200 3311 -2 1591 144 3 87 chr10 37318108 37318209 -108271079 + AluJo SINE Alu 27 135 -177 1886 120 80 0 chr10 37318209 37318485 -108270803 - AluSq SINE Alu -15 298 1 1591 144 3 87 chr10 37318485 37318695 -108270593 + AluJo SINE Alu 135 312 0 2054 98 0 54 chr10 37319376 37319673 -108269615 + AluSx SINE Alu 1 281 -31 246 62 0 0 chr10 37319674 37319706 -108269582 + (TAAG)n Simple_repeat Simple_repeat 4 35 0 201 121 0 0 chr10 37320168 37320201 -108269087 + (A)n Simple_repeat Simple_repeat 1 33 0 2453 73 6 6 chr10 37322232 37322545 -108266743 - AluSp SINE Alu 0 313 1 1912 135 33 10 chr10 37322576 37322880 -108266408 + AluSx SINE Alu 1 311 -1 2252 104 3 0 chr10 37322892 37323189 -108266099 + AluSx SINE Alu 11 308 -4 1498 186 6 48 chr10 37323487 37323798 -108265490 - AluJo SINE Alu -14 298 1 1139 107 6 0 chr10 37324101 37324260 -108265028 - AluSc SINE Alu -18 291 132 2133 130 0 3 chr10 37324260 37324552 -108264736 - AluSc SINE Alu -13 296 6 244 216 54 14 chr10 37325044 37325118 -108264170 + MLT1L LTR MaLR 7 83 -532 272 307 127 0 chr10 37325319 37325469 -108263819 + MLT1L LTR MaLR 423 591 -24 729 230 70 32 chr10 37325616 37325803 -108263485 - MIR SINE MIR -68 194 1 2280 98 13 0 chr10 37325989 37326294 -108262994 - AluSx SINE Alu -3 309 1 22 35 0 0 chr10 37328102 37328131 -108261157 + AT_rich Low_complexity Low_complexity 1 29 0 355 298 70 9 chr10 37329417 37329531 -108259757 + MIR SINE MIR 20 140 -122 23 0 0 0 chr10 37330057 37330080 -108259208 + AT_rich Low_complexity Low_complexity 1 23 0 2376 69 0 0 chr10 37330156 37330444 -108258844 - AluY SINE Alu -22 289 2 320 240 42 0 chr10 37331339 37331435 -108257853 - Charlie1 DNA MER1_type -40 2721 2622 * 512 258 55 23 chr10 37331423 37331640 -108257648 - Charlie1 DNA MER1_type -2524 237 14 1725 181 7 13 chr10 37331759 37332069 -108257219 + AluJo SINE Alu 1 308 -4 224 279 76 0 chr10 37332162 37332241 -108257047 - MIR SINE MIR -20 242 158 695 172 8 16 chr10 37332955 37333077 -108256211 + FLAM_C SINE Alu 1 121 -12 2113 121 3 19 chr10 37333089 37333402 -108255886 + AluSx SINE Alu 4 311 -1 1925 134 0 18 chr10 37333808 37334092 -108255196 + AluJo SINE Alu 9 287 -25 1829 147 3 21 chr10 37334152 37334461 -108254827 + AluSx SINE Alu 4 307 0 405 0 0 0 chr10 37334462 37334507 -108254781 + (CA)n Simple_repeat Simple_repeat 2 46 0 252 213 38 0 chr10 37334652 37334732 -108254556 + MER20B DNA MER1_type 547 629 -154 21 0 0 0 chr10 37334771 37334792 -108254496 + AT_rich Low_complexity Low_complexity 1 21 0 338 181 43 43 chr10 37334846 37334962 -108254326 + MER20B DNA MER1_type 667 782 -1 190 154 0 96 chr10 37335306 37335358 -108253930 + MIR SINE MIR 105 151 -57 708 181 98 0 chr10 37335732 37335865 -108253423 - FRAM SINE Alu -30 146 1 2435 103 0 0 chr10 37336335 37336646 -108252642 + AluSq SINE Alu 1 311 -2 1205 121 59 151 chr10 37338572 37338877 -108250411 - AluJo SINE Alu -15 297 21 891 93 78 0 chr10 37339004 37339133 -108250155 - MER85 DNA T2_type 0 139 1 553 242 166 27 chr10 37339224 37339447 -108249841 - MIR SINE MIR -6 256 3 2221 106 7 0 chr10 37339712 37340015 -108249273 + AluSg SINE Alu 1 305 -5 441 0 0 0 chr10 37340276 37340325 -108248963 + (TG)n Simple_repeat Simple_repeat 2 50 0 1826 83 13 103 chr10 37340325 37340625 -108248663 - AluSg SINE Alu -27 283 11 1986 138 10 21 chr10 37340654 37340944 -108248344 - AluSx SINE Alu -25 287 1 1507 161 54 54 chr10 37340981 37341261 -108248027 + AluJb SINE Alu 1 280 -32 25 0 0 0 chr10 37341881 37341906 -108247382 + AT_rich Low_complexity Low_complexity 1 25 0 2608 42 0 3 chr10 37341953 37342264 -108247024 - AluY SINE Alu -1 310 1 240 382 100 6 chr10 37342305 37342475 -108246813 - MIR3 SINE MIR -4 204 19 808 251 65 30 chr10 37343572 37343835 -108245453 + MLT1J LTR MaLR 200 471 -40 249 108 0 0 chr10 37346252 37346289 -108242999 + (T)n Simple_repeat Simple_repeat 1 37 0 2070 104 10 17 chr10 37347395 37347692 -108241596 + AluSp SINE Alu 1 295 -18 1815 128 78 0 chr10 37347843 37348124 -108241164 - AluSg SINE Alu -1 309 7 266 257 14 0 chr10 37348665 37348735 -108240553 + MER45A DNA AcHobo 79 149 -29 3336 190 60 4 chr10 37348737 37349453 -108239835 + LTR39 LTR ERV1 1 756 -27 495 248 0 9 chr10 37349501 37349610 -108239678 + MER5A DNA MER1_type 7 114 -75 505 182 152 0 chr10 37349684 37349783 -108239505 + AluJb SINE Alu 4 117 -195 1236 115 37 13 chr10 37350013 37350356 -108238932 + MLT1B LTR MaLR 1 390 0 198 0 0 0 chr10 37350367 37350389 -108238899 + (A)n Simple_repeat Simple_repeat 1 22 0 374 282 285 14 chr10 37352134 37352478 -108236810 - L2 LINE L2 0 3313 2877 2122 119 3 0 chr10 37353224 37353510 -108235778 + AluSx SINE Alu 1 287 -25 249 231 50 0 chr10 37353520 37353604 -108235684 - MIR SINE MIR -66 142 63 255 258 38 76 chr10 37353663 37353795 -108235493 - L2 LINE L2 -4 3309 3183 1111 196 20 5 chr10 37355362 37355589 -108233699 + AluJo SINE Alu 84 313 0 866 162 0 0 chr10 37356575 37356711 -108232577 + FLAM_C SINE Alu 1 136 -7 1829 163 46 27 chr10 37357059 37357427 -108231861 - THE1C LTR MaLR 0 375 1 27 49 0 0 chr10 37358007 37358048 -108231240 + AT_rich Low_complexity Low_complexity 1 41 0 29 47 0 0 chr10 37358128 37358171 -108231117 + AT_rich Low_complexity Low_complexity 1 43 0 935 172 0 12 chr10 37358171 37358334 -108230954 - AluJo SINE Alu -25 287 127 22 0 0 0 chr10 37359061 37359083 -108230205 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr10 37359258 37359279 -108230009 + AT_rich Low_complexity Low_complexity 1 21 0 385 198 105 129 chr10 37360612 37360783 -108228505 + L1M4 LINE L1 3980 4145 -2001 1787 150 3 39 chr10 37360783 37361089 -108228199 + AluJb SINE Alu 1 295 -17 385 198 105 129 chr10 37361089 37361165 -108228123 + L1M4 LINE L1 4145 4221 -1925 548 253 67 44 chr10 37361299 37361512 -108227776 + MER97a DNA MER1_type? 11 231 -663 1618 158 0 85 chr10 37361512 37361841 -108227447 - AluJb SINE Alu -11 301 1 548 253 67 44 chr10 37361841 37361852 -108227436 + MER97a DNA MER1_type? 231 240 -654 1403 170 7 73 chr10 37361869 37362169 -108227119 + AluJo SINE Alu 1 280 -32 928 228 49 52 chr10 37362245 37362574 -108226714 + MER97b DNA MER1_type? 278 605 -448 462 226 122 54 chr10 37362927 37363223 -108226065 + MER97c DNA MER1_type? 775 1090 0 472 219 75 37 chr10 37363229 37363416 -108225872 + L1ME3 LINE L1 5718 5911 -259 396 259 17 0 chr10 37363444 37363560 -108225728 + L1ME3 LINE L1 5989 6106 -56 2370 122 36 5 chr10 37364920 37365312 -108223976 + MLT2A1 LTR ERVL 1 404 -40 253 155 41 31 chr10 37365316 37365413 -108223875 + (TA)n Simple_repeat Simple_repeat 2 99 0 22 0 0 0 chr10 37365420 37365442 -108223846 + AT_rich Low_complexity Low_complexity 1 22 0 536 264 76 30 chr10 37365584 37365887 -108223401 + MER97c DNA MER1_type? 774 1090 0 2526 70 0 3 chr10 37365911 37366223 -108223065 - AluY SINE Alu 0 311 1 511 134 12 0 chr10 37366223 37366305 -108222983 + MER66B LTR ERV1 404 486 0 893 133 0 22 chr10 37368343 37368478 -108220810 + FLAM_C SINE Alu 2 133 0 2449 80 3 0 chr10 37368510 37368809 -108220479 + AluSc SINE Alu 1 300 -9 183 42 0 0 chr10 37369731 37369755 -108219533 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 541 167 31 0 chr10 37369759 37369855 -108219433 + MER45A DNA AcHobo 80 178 0 843 243 97 8 chr10 37370260 37370357 -108218931 - MER2 DNA MER2_type 0 345 258 2367 87 3 0 chr10 37370357 37370656 -108218632 - AluSx SINE Alu -12 300 1 843 243 97 8 chr10 37370656 37370825 -108218463 - MER2 DNA MER2_type -87 258 55 1161 195 42 35 chr10 37371369 37371630 -108217658 - AluJo SINE Alu -16 296 34 2472 52 0 52 chr10 37373622 37373948 -108215340 - AluY SINE Alu -2 309 1 25 51 0 0 chr10 37374086 37374125 -108215163 + AT_rich Low_complexity Low_complexity 1 39 0 257 294 64 0 chr10 37374437 37374546 -108214742 + MIR SINE MIR 120 235 -27 4917 168 65 36 chr10 37376511 37376719 -108212569 + L1MA5 LINE L1 4533 4734 -1566 2252 86 0 40 chr10 37376719 37377043 -108212245 + AluY SINE Alu 1 311 0 4917 168 65 36 chr10 37377043 37377879 -108211409 + L1MA5 LINE L1 4734 5545 -755 1998 115 14 14 chr10 37377879 37378165 -108211123 + AluSx SINE Alu 21 306 -6 4917 168 65 36 chr10 37378165 37378478 -108210810 + L1MA5 LINE L1 5545 5848 -452 1527 191 31 7 chr10 37378478 37378772 -108210516 + AluJo SINE Alu 1 301 -11 4917 168 65 36 chr10 37378772 37378796 -108210492 + L1MA5 LINE L1 5848 5870 -430 2092 115 10 13 chr10 37378796 37379109 -108210179 + AluSx SINE Alu 1 312 0 4917 168 65 36 chr10 37379109 37379440 -108209848 + L1MA5 LINE L1 5870 6300 0 22 56 0 0 chr10 37379672 37379708 -108209580 + AT_rich Low_complexity Low_complexity 1 36 0 2281 121 3 0 chr10 37380867 37381172 -108208116 - AluSx SINE Alu -6 306 1 222 296 171 23 chr10 37381512 37381688 -108207600 - L3 LINE CR1 -12 1565 1364 181 0 0 65 chr10 37382992 37383023 -108206265 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 1506 140 13 4 chr10 37383089 37383318 -108205970 - AluSx SINE Alu -81 231 1 228 67 0 0 chr10 37384637 37384667 -108204621 + (T)n Simple_repeat Simple_repeat 1 30 0 2218 101 3 3 chr10 37385520 37385817 -108203471 + AluY SINE Alu 1 297 -14 2347 91 7 0 chr10 37387452 37387749 -108201539 + AluSp SINE Alu 1 299 -14 251 256 0 44 chr10 37388160 37388250 -108201038 + CT-rich Low_complexity Low_complexity 2 87 0 1614 167 23 49 chr10 37388844 37389149 -108200139 - AluJo SINE Alu -15 297 1 1559 185 65 96 chr10 37389156 37389636 -108199652 + MLT1C LTR MaLR 1 465 -2 532 230 31 56 chr10 37390232 37390393 -108198895 - MER58B DNA MER1_type -1 340 184 1865 154 23 7 chr10 37392265 37392564 -108196724 - AluJb SINE Alu -7 305 2 351 0 0 0 chr10 37392624 37392663 -108196625 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 1564 174 4 4 chr10 37392677 37392936 -108196352 - AluJo SINE Alu -53 259 1 1579 187 27 0 chr10 37393456 37393718 -108195570 - AluJb SINE Alu -43 269 1 1754 136 80 0 chr10 37393821 37394085 -108195203 + AluSg SINE Alu 1 285 -25 3760 197 33 46 chr10 37394893 37395747 -108193541 - L1MA7 LINE L1 -39 6252 5410 394 63 63 0 chr10 37397860 37397939 -108191349 + GA-rich Low_complexity Low_complexity 2 85 0 1839 111 111 7 chr10 37400937 37401216 -108188072 + AluSg SINE Alu 3 310 0 1382 182 14 43 chr10 37401397 37401677 -108187611 + AluJo SINE Alu 1 272 -40 248 0 31 0 chr10 37401677 37401709 -108187579 + (CA)n Simple_repeat Simple_repeat 2 34 0 1368 124 0 0 chr10 37402156 37402334 -108186954 + AluSx SINE Alu 1 178 -134 1504 138 5 0 chr10 37402336 37402560 -108186728 + AluSg/x SINE Alu 86 310 0 275 264 33 0 chr10 37402573 37402664 -108186624 + L1MC/D LINE L1 5559 5652 -469 1649 186 16 7 chr10 37405472 37405778 -108183510 + AluJo SINE Alu 1 309 -3 2059 144 3 0 chr10 37406688 37406987 -108182301 - AluJo SINE Alu -12 300 1 437 33 0 17 chr10 37406995 37407055 -108182233 + (TTTTA)n Simple_repeat Simple_repeat 2 60 0 2099 131 0 0 chr10 37407058 37407340 -108181948 - AluSx SINE Alu -30 282 1 906 158 5 113 chr10 37408517 37408738 -108180550 - AluJo SINE Alu -29 283 87 322 248 50 30 chr10 37409074 37409175 -108180113 + L2 LINE L2 3191 3293 -20 1570 149 93 50 chr10 37410271 37410594 -108178694 - MER1B DNA MER1_type 0 337 1 621 217 17 0 chr10 37411002 37411117 -108178171 + FLAM_C SINE Alu 5 121 -22 5786 154 99 6 chr10 37411133 37411434 -108177854 - Tigger3b DNA MER2_type -1833 1195 923 200 35 35 0 chr10 37411434 37411463 -108177825 + (TGAG)n Simple_repeat Simple_repeat 1 30 0 5786 154 99 6 chr10 37411463 37412255 -108177033 - Tigger3b DNA MER2_type -2105 923 1 2508 83 3 0 chr10 37412564 37412876 -108176412 + AluSp SINE Alu 1 313 0 627 207 8 8 chr10 37413917 37414038 -108175250 - FLAM_A SINE Alu -12 121 1 1074 156 12 0 chr10 37415473 37415646 -108173642 + FAM SINE Alu 1 175 0 533 252 84 0 chr10 37416138 37416293 -108172995 - MIR SINE MIR -74 188 21 546 169 127 17 chr10 37418956 37419074 -108170214 + FLAM_C SINE Alu 2 132 -1 2325 92 0 0 chr10 37419359 37419669 -108169619 - AluSx SINE Alu 0 310 1 2510 67 0 0 chr10 37419695 37419993 -108169295 + AluY SINE Alu 1 298 -13 198 103 0 0 chr10 37420352 37420381 -108168907 + (CTGGGG)n Simple_repeat Simple_repeat 6 34 0 239 236 394 0 chr10 37420461 37420669 -108168619 - LTR50 LTR ERVL -505 290 1 258 331 65 0 chr10 37420670 37420809 -108168479 + MIR SINE MIR 112 259 -3 394 288 45 8 chr10 37421178 37421310 -108167978 - L1MC5 LINE L1 -66 7895 7759 24 0 0 0 chr10 37422712 37422736 -108166552 + AT_rich Low_complexity Low_complexity 1 24 0 5580 105 57 6 chr10 37423982 37424417 -108164871 + L1MA3 LINE L1 5394 5805 -500 1988 141 10 0 chr10 37424417 37424716 -108164572 + AluSx SINE Alu 1 302 -10 5580 105 57 6 chr10 37424716 37425007 -108164281 + L1MA3 LINE L1 5805 6174 -131 1833 136 0 11 chr10 37425007 37425279 -108164009 + AluSx SINE Alu 1 269 -43 5580 105 57 6 chr10 37425279 37425419 -108163869 + L1MA3 LINE L1 6174 6305 0 2290 104 0 0 chr10 37426030 37426327 -108162961 - AluSg SINE Alu -13 297 1 2053 119 11 0 chr10 37426327 37426612 -108162676 - AluSx SINE Alu -24 288 1 240 200 0 0 chr10 37426816 37426871 -108162417 + GA-rich Low_complexity Low_complexity 2 56 0 22 0 0 0 chr10 37426915 37426937 -108162351 + AT_rich Low_complexity Low_complexity 1 22 0 1188 121 0 76 chr10 37427158 37427381 -108161907 + AluSp SINE Alu 102 307 -6 1943 123 18 0 chr10 37427386 37427663 -108161625 + AluSg SINE Alu 1 282 -28 623 46 11 0 chr10 37427667 37427754 -108161534 + (CAGAA)n Simple_repeat Simple_repeat 2 89 0 1237 192 55 48 chr10 37427764 37428056 -108161232 + AluJo SINE Alu 1 294 -18 27 0 0 0 chr10 37428493 37428520 -108160768 + GC_rich Low_complexity Low_complexity 1 27 0 207 220 0 0 chr10 37428623 37428673 -108160615 + (CATA)n Simple_repeat Simple_repeat 2 51 0 1873 127 4 4 chr10 37428712 37428980 -108160308 + AluSx SINE Alu 1 268 -44 860 151 0 0 chr10 37430517 37430643 -108158645 + FLAM_C SINE Alu 1 126 -17 445 148 99 0 chr10 37430744 37430825 -108158463 - L2 LINE L2 0 3313 3225 3912 108 41 20 chr10 37430833 37431437 -108157851 + L1PB4 LINE L1 5540 6156 0 202 294 98 39 chr10 37432233 37432335 -108156953 + MIR3 SINE MIR 49 156 -52 195 254 0 55 chr10 37432389 37432444 -108156844 - MER5B DNA MER1_type -68 110 59 1367 167 29 12 chr10 37433760 37434006 -108155282 + AluJo SINE Alu 42 291 -21 833 237 0 0 chr10 37434363 37434515 -108154773 + FRAM SINE Alu 1 152 -24 1407 146 26 0 chr10 37435606 37435832 -108153456 + AluSg/x SINE Alu 70 301 -9 1116 174 167 3 chr10 37436027 37436314 -108152974 + MER66A LTR ERV1 84 417 -61 2117 130 3 0 chr10 37536644 37536937 -108052351 - AluSx SINE Alu -13 299 6 2186 97 38 0 chr10 37537182 37537471 -108051817 - AluSp SINE Alu -13 300 1 239 53 0 26 chr10 37537915 37537953 -108051335 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 395 165 25 0 chr10 37537953 37538032 -108051256 + MER53 DNA DNA 29 109 -80 1684 193 23 10 chr10 37538035 37538341 -108050947 + AluJo SINE Alu 3 312 0 462 186 101 23 chr10 37538405 37538534 -108050754 - MER53 DNA DNA -49 140 2 243 294 44 0 chr10 37539327 37539395 -108049893 - MIR SINE MIR -72 190 120 198 0 0 0 chr10 37539441 37539463 -108049825 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 801 126 0 0 chr10 37539470 37539581 -108049707 - FLAM_C SINE Alu -32 111 1 40 21 0 0 chr10 37539602 37539649 -108049639 + AT_rich Low_complexity Low_complexity 1 47 0 2257 114 0 7 chr10 37539793 37540100 -108049188 - AluSx SINE Alu -7 305 1 282 119 0 0 chr10 37540228 37540314 -108048974 - AluJo SINE Alu 0 329 244 252 256 25 100 chr10 37540314 37540474 -108048814 + LTR2 LTR ERV1 13 160 -289 * 911 163 5 37 chr10 37540470 37540660 -108048628 + LTR2 LTR ERV1 266 449 0 42634 79 20 9 chr10 37540660 37546579 -108042709 + HERVE LTR ERV1 1 6022 -1791 391 210 0 0 chr10 37546616 37546697 -108042591 + HERVE LTR ERV1 6815 6895 -1 319 263 17 103 chr10 37546697 37546872 -108042416 + LTR2 LTR ERV1 1 160 -289 * 979 161 5 16 chr10 37546868 37547054 -108042234 + LTR2 LTR ERV1 266 449 0 1027 163 47 29 chr10 37547054 37547226 -108042062 - AluJo SINE Alu -71 241 67 11002 65 17 7 chr10 37547362 37548735 -108040553 + SVA Other Other 1 1386 0 1756 188 27 0 chr10 37548901 37549193 -108040095 + AluJb SINE Alu 1 300 -12 198 0 0 0 chr10 37549307 37549329 -108039959 + (T)n Simple_repeat Simple_repeat 1 22 0 982 115 72 0 chr10 37549380 37549549 -108039739 + AluSg/x SINE Alu 137 315 0 358 338 37 59 chr10 37549783 37550055 -108039233 - L2 LINE L2 -508 2806 2541 2310 113 0 3 chr10 37550534 37550835 -108038453 - AluSx SINE Alu -12 300 1 1980 159 0 3 chr10 37551346 37551642 -108037646 - AluJo SINE Alu -17 295 1 1939 141 16 22 chr10 37551992 37552305 -108036983 + AluJo SINE Alu 1 311 -1 2224 107 14 0 chr10 37552305 37552595 -108036693 - AluSx SINE Alu -17 295 2 473 199 145 64 chr10 37553114 37553301 -108035987 - L1ME3A LINE L1 -308 5839 5635 416 189 0 14 chr10 37553340 37553414 -108035874 - AluJo SINE Alu -149 163 91 1416 239 84 38 chr10 37553446 37553799 -108035489 - L1ME3A LINE L1 -511 5634 5298 2922 7 0 0 chr10 37553799 37554108 -108035180 - AluYa5 SINE Alu -2 309 1 1416 239 84 38 chr10 37554108 37554508 -108034780 - L1ME3A LINE L1 -847 5298 4823 2382 85 0 3 chr10 37554508 37554801 -108034487 + AluSg SINE Alu 1 292 -18 1416 239 84 38 chr10 37554801 37554915 -108034373 - L1ME3A LINE L1 -1322 4823 4716 2165 140 0 13 chr10 37554960 37555275 -108034013 - AluSq SINE Alu -2 311 1 1223 136 11 0 chr10 37555278 37555455 -108033833 - FRAM SINE Alu -4 172 1 2275 105 0 3 chr10 37555468 37555763 -108033525 + AluSc SINE Alu 1 294 -15 1015 287 130 9 chr10 37555763 37556303 -108032985 - L1ME3A LINE L1 -1507 4622 4018 347 254 67 53 chr10 37556302 37556511 -108032777 - L1ME3A LINE L1 -4957 1353 1142 * 808 137 0 8 chr10 37556578 37556709 -108032579 + MER3 DNA MER1_type 80 209 0 351 138 17 0 chr10 37556666 37556724 -108032564 - MER3 DNA MER1_type -119 90 32 * 459 185 62 14 chr10 37556739 37556885 -108032403 - L1ME3A LINE L1 -5059 1060 908 1009 234 121 94 chr10 37556895 37556944 -108032344 + LTR41 LTR ERVL 1 47 -726 2160 123 7 0 chr10 37556944 37557244 -108032044 + AluSq SINE Alu 1 302 -11 1009 234 121 94 chr10 37557244 37557563 -108031725 + LTR41 LTR ERVL 47 356 -417 2306 116 72 17 chr10 37557563 37557908 -108031380 - THE1B LTR MaLR 0 364 1 1009 234 121 94 chr10 37557908 37558142 -108031146 + LTR41 LTR ERVL 356 582 -191 2336 94 0 31 chr10 37558142 37558460 -108030828 - AluSq SINE Alu -5 308 1 1009 234 121 94 chr10 37558460 37558491 -108030797 + LTR41 LTR ERVL 582 611 -162 1688 188 14 3 chr10 37558491 37558783 -108030505 - AluJb SINE Alu -17 295 1 1009 234 121 94 chr10 37558783 37558858 -108030430 + LTR41 LTR ERVL 611 772 -1 1462 205 26 43 chr10 37558888 37559061 -108030227 - AluJo SINE Alu -15 297 130 2168 140 16 0 chr10 37559061 37559368 -108029920 + AluSx SINE Alu 1 312 0 1462 205 26 43 chr10 37559368 37559496 -108029792 - AluJo SINE Alu -182 130 1 301 322 81 7 chr10 37559552 37559701 -108029587 - L1ME3A LINE L1 -5278 841 682 2265 114 3 19 chr10 37559713 37560030 -108029258 - AluSx SINE Alu 0 312 1 296 262 168 19 chr10 37560050 37560157 -108029131 + L2 LINE L2 3150 3272 0 201 200 0 22 chr10 37560529 37560574 -108028714 + (TATG)n Simple_repeat Simple_repeat 4 47 0 345 307 64 7 chr10 37560815 37560955 -108028333 + L1M4 LINE L1 3503 3650 -2496 226 252 235 0 chr10 37560978 37561097 -108028191 + L1M4 LINE L1 4062 4208 -1938 2191 114 7 0 chr10 37561532 37561821 -108027467 + AluSx SINE Alu 3 293 -19 866 125 28 0 chr10 37561822 37561966 -108027322 + L1MA7 LINE L1 6144 6291 0 2318 99 7 0 chr10 37561971 37562275 -108027013 + AluY SINE Alu 1 306 -5 2081 120 3 27 chr10 37562461 37562760 -108026528 - AluSq SINE Alu -21 292 1 1766 177 3 0 chr10 37562760 37563043 -108026245 + AluJo SINE Alu 24 307 -5 264 250 22 0 chr10 37563062 37563154 -108026134 + L1MEc LINE L1 2207 2300 -4096 321 100 0 0 chr10 37563154 37563204 -108026084 + (CA)n Simple_repeat Simple_repeat 1 50 0 396 0 0 0 chr10 37563731 37563775 -108025513 + (CA)n Simple_repeat Simple_repeat 2 45 0 690 135 0 0 chr10 37563936 37564032 -108025256 + AluS SINE Alu 2 97 -216 286 54 0 0 chr10 37564032 37564069 -108025219 - Alu SINE Alu -264 38 2 436 345 44 48 chr10 37564069 37564362 -108024926 - HAL1 LINE L1 -1101 1406 1115 2363 84 7 7 chr10 37564435 37564744 -108024544 - AluSc SINE Alu 0 309 1 2310 105 7 3 chr10 37564798 37565103 -108024185 + AluSx SINE Alu 1 306 -6 615 120 0 37 chr10 37565114 37565222 -108024066 - L1PB4 LINE L1 0 6156 6053 236 288 0 38 chr10 37565938 37566018 -108023270 - MIR SINE MIR -13 249 173 199 361 24 12 chr10 37567255 37567338 -108021950 + L3 LINE CR1 1254 1337 -240 198 0 0 0 chr10 37567410 37567432 -108021856 + (CAAA)n Simple_repeat Simple_repeat 2 23 0 23 0 0 0 chr10 37567759 37567782 -108021506 + AT_rich Low_complexity Low_complexity 1 23 0 2254 161 13 0 chr10 37567783 37568168 -108021120 - MER57A LTR ERV1 -13 390 1 1811 145 25 4 chr10 37568168 37568444 -108020844 + AluJo SINE Alu 22 303 -9 455 197 53 23 chr10 37568618 37568750 -108020538 - Charlie4 DNA MER1_type -37 1924 1789 2291 119 7 0 chr10 37568750 37569060 -108020228 + AluSx SINE Alu 1 312 0 688 161 81 8 chr10 37570046 37570170 -108019118 + FLAM_C SINE Alu 1 133 0 648 172 0 64 chr10 37570170 37570234 -108019054 - L2 LINE L2 -784 2530 2463 1793 102 109 0 chr10 37570234 37570500 -108018788 + AluSx SINE Alu 1 295 -17 648 172 0 64 chr10 37570500 37570592 -108018696 - L2 LINE L2 -851 2463 2384 944 181 0 28 chr10 37570593 37570770 -108018518 - MLT1A1 LTR MaLR 0 365 194 1464 244 7 0 chr10 37570770 37571077 -108018211 + ERVL-B1 LTR ERVL 443 751 -5013 * 5339 134 75 19 chr10 37571076 37571939 -108017349 + ERVL-B1 LTR ERVL 4766 5687 -77 2280 110 10 3 chr10 37571939 37572238 -108017050 - AluSx SINE Alu -11 301 1 5339 134 75 19 chr10 37572238 37572314 -108016974 + ERVL-B1 LTR ERVL 5687 5757 -7 1860 199 80 16 chr10 37572314 37572750 -108016538 + MLT2B1 LTR ERVL 1 464 -56 2070 113 0 24 chr10 37572751 37573043 -108016245 + AluSq SINE Alu 1 285 -28 835 93 0 0 chr10 37572935 37573043 -108016245 + AluSp/q SINE Alu 178 315 0 216 0 67 0 chr10 37573043 37573073 -108016215 + (TAAA)n Simple_repeat Simple_repeat 2 180 0 2037 164 11 20 chr10 37573088 37573435 -108015853 - MER2 DNA MER2_type 0 344 1 207 204 0 0 chr10 37573435 37573484 -108015804 + (TG)n Simple_repeat Simple_repeat 2 50 0 259 152 0 0 chr10 37573489 37573535 -108015753 + MLT2B1 LTR ERVL 459 504 -11 2408 78 7 0 chr10 37574268 37574563 -108014725 + AluSp SINE Alu 1 297 -16 1072 161 6 0 chr10 37574563 37574731 -108014557 + AluSg/x SINE Alu 134 302 -10 360 0 0 0 chr10 37574869 37574909 -108014379 + (TG)n Simple_repeat Simple_repeat 1 40 0 1600 129 12 17 chr10 37575026 37575267 -108014021 - AluSx SINE Alu -72 240 1 1860 97 70 8 chr10 37575806 37576065 -108013223 + AluSc SINE Alu 1 275 -34 307 275 129 38 chr10 37576398 37576638 -108012650 + L2 LINE L2 2267 2528 -786 2183 101 7 0 chr10 37576678 37576966 -108012322 + AluSx SINE Alu 1 290 -22 2171 107 7 3 chr10 37577016 37577307 -108011981 + AluSx SINE Alu 1 292 -20 271 330 117 10 chr10 37577691 37577794 -108011494 + L2 LINE L2 3153 3266 -6 2345 95 0 3 chr10 37578093 37578398 -108010890 - AluSp SINE Alu -9 304 1 244 322 148 20 chr10 37578844 37578993 -108010295 + MIR SINE MIR 45 212 -50 2139 127 0 0 chr10 37579107 37579399 -108009889 + AluJb SINE Alu 7 298 -14 286 217 196 0 chr10 37580343 37580486 -108008802 + L1MC5 LINE L1 7611 7781 -180 704 154 27 0 chr10 37580510 37580620 -108008668 + FLAM_C SINE Alu 5 117 -26 302 0 26 0 chr10 37580743 37580781 -108008507 + (TA)n Simple_repeat Simple_repeat 2 40 0 367 297 55 110 chr10 37582246 37582536 -108006752 + L2 LINE L2 2999 3272 0 970 142 11 158 chr10 37582669 37582897 -108006391 - AluJo SINE Alu -90 222 35 2275 104 0 0 chr10 37582897 37583194 -108006094 + AluSx SINE Alu 3 299 -13 970 142 11 158 chr10 37583194 37583225 -108006063 - AluJo SINE Alu -277 35 1 983 162 0 0 chr10 37583613 37583767 -108005521 - AluSg/x SINE Alu -12 298 145 224 323 0 0 chr10 37584518 37584580 -108004708 + MER5A DNA MER1_type 127 188 -1 2402 66 0 16 chr10 37584618 37584921 -108004367 + AluY SINE Alu 1 298 -13 25 31 0 0 chr10 37585364 37585396 -108003892 + AT_rich Low_complexity Low_complexity 1 32 0 1895 179 0 0 chr10 37586110 37586417 -108002871 + AluSx SINE Alu 1 307 -5 2188 95 16 30 chr10 37586566 37586871 -108002417 + AluSq SINE Alu 1 301 -12 2282 123 0 0 chr10 37588204 37588513 -108000775 + AluSx SINE Alu 1 309 -3 2084 145 3 0 chr10 37588972 37589268 -108000020 + AluSx SINE Alu 2 298 -14 201 74 0 0 chr10 37589435 37589462 -107999826 + (A)n Simple_repeat Simple_repeat 1 27 0 2233 65 39 29 chr10 37589568 37589874 -107999414 + AluY SINE Alu 1 309 -2 2547 53 3 0 chr10 37590041 37590341 -107998947 + AluSp SINE Alu 1 301 -12 779 260 67 24 chr10 37591331 37591787 -107997501 + L1MC5 LINE L1 7139 7495 -519 229 203 0 62 chr10 37591756 37591820 -107997468 + L1MC4 LINE L1 7513 7572 -470 * 757 110 9 0 chr10 37592523 37592632 -107996656 - FLAM_C SINE Alu -9 134 25 990 70 0 0 chr10 37592806 37592935 -107996353 - AluY SINE Alu -2 309 181 246 290 12 24 chr10 37592959 37593002 -107996286 + (TA)n Simple_repeat Simple_repeat 2 44 -124 219 69 0 0 chr10 37593002 37593031 -107996257 + (CA)n Simple_repeat Simple_repeat 2 30 0 246 290 12 24 chr10 37593031 37593156 -107996132 + (TA)n Simple_repeat Simple_repeat 44 168 0 205 262 0 16 chr10 37593155 37593216 -107996072 + CT-rich Low_complexity Low_complexity 3 62 0 * 250 102 153 17 chr10 37593224 37593283 -107996005 - FLAM_A SINE Alu -46 87 21 * 298 280 0 15 chr10 37593240 37593349 -107995939 + AluJb SINE Alu 165 252 -45 897 110 0 0 chr10 37593349 37593485 -107995803 + (AGGTG)n Simple_repeat Simple_repeat 3 138 0 278 368 75 49 chr10 37593496 37593762 -107995526 + L2 LINE L2 2996 3268 -4 406 275 28 18 chr10 37593772 37593881 -107995407 - MIR SINE MIR -125 137 28 931 165 76 89 chr10 37594201 37594324 -107994964 + L1MA9 LINE L1 6000 6123 -189 2368 90 7 0 chr10 37594324 37594624 -107994664 + AluSg SINE Alu 1 302 -8 931 165 76 89 chr10 37594624 37594815 -107994473 + L1MA9 LINE L1 6123 6310 -2 1957 130 3 3 chr10 37595410 37595694 -107993594 - AluJb SINE Alu -28 284 1 249 268 18 0 chr10 37596855 37596911 -107992377 - MIR3 SINE MIR -28 180 124 1339 32 0 0 chr10 37598396 37598552 -107990736 - L1PA3 LINE L1 -3 6152 5997 2388 80 0 0 chr10 37598703 37599002 -107990286 - AluY SINE Alu -11 300 2 304 114 0 0 chr10 37599618 37599662 -107989626 + Alu SINE Alu 1 44 -257 2149 123 3 0 chr10 37600615 37600916 -107988372 - AluSx SINE Alu -10 302 1 841 175 24 12 chr10 37601544 37601710 -107987578 - FAM SINE Alu -7 168 1 1731 192 0 0 chr10 37601956 37602242 -107987046 - AluJb SINE Alu -26 286 1 902 132 0 0 chr10 37602307 37602436 -107986852 + FLAM_A SINE Alu 2 130 -3 1074 133 6 6 chr10 37603281 37603446 -107985842 - FRAM SINE Alu -12 164 1 26 0 0 0 chr10 37604560 37604586 -107984702 + AT_rich Low_complexity Low_complexity 1 26 0 2217 92 0 22 chr10 37605013 37605330 -107983958 + AluSg SINE Alu 1 310 0 539 232 190 9 chr10 37607159 37607370 -107981918 - L1MC4a LINE L1 -1947 5861 5613 267 214 48 36 chr10 37607423 37607507 -107981781 - L1MC4a LINE L1 -2304 5504 5420 * 1734 223 77 64 chr10 37607504 37608158 -107981130 - L1ME3A LINE L1 0 6170 5509 1487 169 0 4 chr10 37608304 37608546 -107980742 - AluJb SINE Alu -23 289 49 1191 269 16 13 chr10 37608552 37608999 -107980289 - L1ME3A LINE L1 -965 5181 4734 2149 118 3 0 chr10 37609123 37609420 -107979868 + AluSg SINE Alu 1 298 -12 2063 119 14 0 chr10 37609431 37609716 -107979572 + AluSx SINE Alu 1 289 -23 27 29 0 0 chr10 37609716 37609750 -107979538 + AT_rich Low_complexity Low_complexity 1 34 0 2417 81 0 7 chr10 37609803 37610110 -107979178 + AluSg SINE Alu 1 305 -5 30 45 0 0 chr10 37610123 37610167 -107979121 + AT_rich Low_complexity Low_complexity 1 44 0 1976 137 35 0 chr10 37611142 37611427 -107977861 + AluSx SINE Alu 1 295 -17 2246 109 3 3 chr10 37611430 37611743 -107977545 + AluSq SINE Alu 1 313 0 1592 140 3 88 chr10 37612222 37612565 -107976723 - MER1B DNA MER1_type 0 339 26 346 197 0 0 chr10 37612567 37612628 -107976660 - MER1B DNA MER1_type -276 61 1 1577 195 10 7 chr10 37613094 37613396 -107975892 - AluJb SINE Alu -9 303 1 406 116 14 0 chr10 37613471 37613540 -107975748 - L1MB8 LINE L1 -16 6162 6093 1393 196 48 11 chr10 37613552 37613910 -107975378 - L1MB4 LINE L1 -1 6179 5809 2284 180 18 49 chr10 37613914 37614673 -107974615 + MER21A LTR ERV1 1 924 -7 307 282 0 0 chr10 37614684 37614769 -107974519 - L1MB4 LINE L1 -375 5808 5724 1649 179 58 3 chr10 37615344 37615635 -107973653 + AluJo SINE Alu 1 307 -5 624 182 25 0 chr10 37616868 37616989 -107972299 + AluJo/FLAM SINE Alu 3 126 -176 1762 140 19 35 chr10 37616991 37617306 -107971982 + AluJo SINE Alu 1 310 -2 589 167 29 88 chr10 37618104 37618169 -107971119 + L1MC5 LINE L1 6962 7029 -932 2033 131 0 3 chr10 37618169 37618497 -107970791 + AluSx SINE Alu 1 327 0 589 167 29 88 chr10 37618497 37618634 -107970654 + L1MC5 LINE L1 7029 7153 -808 2161 105 7 0 chr10 37618888 37619183 -107970105 + AluY SINE Alu 1 297 -14 1904 121 45 3 chr10 37619195 37619484 -107969804 + AluSx SINE Alu 1 301 -11 368 265 31 0 chr10 37619618 37619716 -107969572 + MIR SINE MIR 134 234 -28 222 305 168 0 chr10 37619741 37619836 -107969452 + MIR SINE MIR 114 224 -38 195 204 0 0 chr10 37621043 37621087 -107968201 + A-rich Low_complexity Low_complexity 1 44 0 2244 101 0 10 chr10 37621600 37621898 -107967390 + AluSc SINE Alu 1 295 -14 721 280 79 57 chr10 37622180 37622593 -107966695 - L1ME3A LINE L1 -306 5864 5462 2402 71 0 0 chr10 37622593 37622889 -107966399 + AluY SINE Alu 1 296 -15 2304 52 7 0 chr10 37622891 37623196 -107966092 + AluY SINE Alu 1 311 0 721 280 79 57 chr10 37623196 37623371 -107965917 - L1ME3A LINE L1 -708 5462 5260 286 255 167 0 chr10 37624020 37624122 -107965166 + L2 LINE L2 3195 3313 0 233 226 99 16 chr10 37624129 37624177 -107965111 + L1ME LINE L1 5694 5737 -384 2465 76 0 0 chr10 37624177 37624478 -107964810 + AluY SINE Alu 5 305 -6 233 226 99 16 chr10 37624478 37624540 -107964748 + L1ME LINE L1 5737 5819 -302 225 280 27 13 chr10 37624793 37624868 -107964420 - L1ME4a LINE L1 -86 6035 5960 319 273 211 16 chr10 37625355 37625483 -107963805 + L2 LINE L2 3119 3271 -1 24 0 0 0 chr10 37626251 37626275 -107963013 + AT_rich Low_complexity Low_complexity 1 24 0 747 141 33 0 chr10 37627010 37627131 -107962157 + FLAM_C SINE Alu 1 125 -8 342 316 95 52 chr10 37627452 37627800 -107961488 + L2 LINE L2 2951 3313 0 545 269 53 25 chr10 37627906 37628123 -107961165 - MIR SINE MIR 0 262 31 314 292 100 8 chr10 37628118 37628248 -107961040 - L2 LINE L2 -7 3306 3165 * 2364 82 20 7 chr10 37628934 37629239 -107960049 + AluSx SINE Alu 1 309 -3 2103 100 7 14 chr10 37629371 37629660 -107959628 + AluSx SINE Alu 1 287 -25 5256 122 30 14 chr10 37629682 37629752 -107959536 + Tigger1 DNA MER2_type 1577 1644 -774 2489 168 75 103 chr10 37629752 37630467 -107958821 + LTR34 LTR ERV1 1 695 -4 5256 122 30 14 chr10 37630467 37631225 -107958063 + Tigger1 DNA MER2_type 1644 2418 0 469 270 74 20 chr10 37631297 37631445 -107957843 + MIR SINE MIR 13 168 -94 1576 176 26 26 chr10 37631537 37631849 -107957439 + AluJo SINE Alu 1 312 0 1984 108 52 3 chr10 37632751 37633038 -107956250 + AluSx SINE Alu 1 301 -11 852 153 0 29 chr10 37633330 37633467 -107955821 - FLAM_C SINE Alu 0 133 1 379 231 8 66 chr10 37633534 37633655 -107955633 - MIR SINE MIR -104 158 45 1586 137 4 24 chr10 37634149 37634404 -107954884 + AluJb SINE Alu 41 290 -22 186 294 20 0 chr10 37635244 37635295 -107953993 + MIR SINE MIR 63 114 -148 23 0 0 0 chr10 37635309 37635332 -107953956 + AT_rich Low_complexity Low_complexity 1 23 0 261 156 26 39 chr10 37636192 37636269 -107953019 + (TTTA)n Simple_repeat Simple_repeat 2 77 0 895 128 0 0 chr10 37636277 37636394 -107952894 - FLAM_C SINE Alu -18 125 9 594 127 0 0 chr10 37636819 37636898 -107952390 + AluSc SINE Alu 2 80 -229 2211 102 6 13 chr10 37636898 37637211 -107952077 + AluY SINE Alu 1 311 0 1729 104 4 0 chr10 37637211 37637439 -107951849 + AluSc SINE Alu 71 301 -8 28 0 0 0 chr10 37637817 37637845 -107951443 + AT_rich Low_complexity Low_complexity 1 28 0 2112 96 21 7 chr10 37637867 37638158 -107951130 - AluSx SINE Alu -17 295 1 1066 109 64 0 chr10 37638566 37638722 -107950566 + AluSp SINE Alu 141 306 -7 1853 151 24 3 chr10 37639027 37639318 -107949970 + AluSx SINE Alu 1 297 -15 2549 47 0 10 chr10 37639385 37639686 -107949602 + AluY SINE Alu 1 298 -13 1550 158 20 4 chr10 37639698 37639944 -107949344 + AluSq SINE Alu 1 250 -63 2065 127 7 3 chr10 37640426 37640726 -107948562 - AluSq SINE Alu -12 301 1 2047 144 0 13 chr10 37640816 37641128 -107948160 + AluJo SINE Alu 1 308 -4 265 285 30 67 chr10 37641592 37641757 -107947531 + MIR SINE MIR 48 206 -56 255 326 68 7 chr10 37642055 37642202 -107947086 - Charlie8 DNA MER1_type -2190 227 72 968 255 62 39 chr10 37642202 37642586 -107946702 + L2 LINE L2 2916 3308 -5 2475 73 0 19 chr10 37642950 37643267 -107946021 - AluY SINE Alu 0 311 1 2369 81 0 0 chr10 37643932 37644227 -107945061 - AluY SINE Alu -16 295 1 545 211 49 148 chr10 37645011 37645150 -107944138 - MIR SINE MIR 0 262 164 2240 114 3 9 chr10 37645150 37645465 -107943823 - AluSq SINE Alu 0 313 1 545 211 49 148 chr10 37645465 37645609 -107943679 - MIR SINE MIR -98 164 7 315 281 85 0 chr10 37645619 37645701 -107943587 - L2 LINE L2 -17 3296 3208 1785 117 78 11 chr10 37646064 37646346 -107942942 - AluSx SINE Alu -11 301 1 447 19 0 0 chr10 37647195 37647247 -107942041 + (CA)n Simple_repeat Simple_repeat 2 53 0 25 51 0 0 chr10 37647254 37647293 -107941995 + AT_rich Low_complexity Low_complexity 1 39 0 2530 170 67 41 chr10 37647425 37647990 -107941298 + L1MB8 LINE L1 5594 6173 -5 1707 92 4 17 chr10 37648327 37648565 -107940723 + AluY SINE Alu 1 235 -76 1147 190 51 0 chr10 37648571 37648808 -107940480 + L1MB7 LINE L1 5649 5897 -287 477 84 0 0 chr10 37648810 37648881 -107940407 + AluY SINE Alu 237 307 -2 1204 146 5 0 chr10 37648901 37649086 -107940202 + AluSg/x SINE Alu 127 312 0 2437 90 3 0 chr10 37649095 37649405 -107939883 + AluSp SINE Alu 1 311 -2 282 235 241 60 chr10 37649420 37649586 -107939702 + L1MC5 LINE L1 7731 7926 -35 2193 105 3 20 chr10 37649855 37650160 -107939128 - AluSp SINE Alu -13 300 1 1741 145 119 21 chr10 37650584 37650921 -107938367 - Tigger7 DNA MER2_type 0 2587 2218 3762 182 38 34 chr10 37650921 37651681 -107937607 - Tigger7 DNA MER2_type -1717 770 8 1721 142 40 4 chr10 37651993 37652314 -107936974 - AluJb SINE Alu 0 331 1 1331 197 3 47 chr10 37652493 37652792 -107936496 + AluJo SINE Alu 3 288 -24 1145 188 14 9 chr10 37653171 37653384 -107935904 + AluJb SINE Alu 1 214 -98 783 139 8 25 chr10 37653586 37653708 -107935580 + FLAM_C SINE Alu 13 132 -11 548 120 0 0 chr10 37653713 37653788 -107935500 + AluJ/FRAM SINE Alu 220 294 -18 1490 214 11 40 chr10 37653789 37654140 -107935148 + L1MB4 LINE L1 5827 6167 -13 2350 100 10 0 chr10 37654435 37654744 -107934544 + AluSx SINE Alu 1 312 0 1982 206 62 31 chr10 37654762 37655276 -107934012 + L1MC4 LINE L1 6504 7033 -1009 594 175 19 29 chr10 37655278 37655381 -107933907 + FLAM_C SINE Alu 2 103 -40 2081 130 7 0 chr10 37655554 37655838 -107933450 + AluSq SINE Alu 1 286 -27 2062 135 0 7 chr10 37656397 37656701 -107932587 + AluSg SINE Alu 1 302 -8 2321 95 0 7 chr10 37656706 37657010 -107932278 + AluY SINE Alu 1 302 -9 1596 93 14 9 chr10 37657020 37657236 -107932052 + AluY SINE Alu 1 217 -94 198 0 0 0 chr10 37657256 37657278 -107932010 + (A)n Simple_repeat Simple_repeat 1 22 0 1023 127 30 18 chr10 37657418 37657583 -107931705 + L1PA16 LINE L1 6000 6166 0 741 110 30 0 chr10 37657596 37657696 -107931592 + AluSq SINE Alu 86 188 -125 389 141 127 0 chr10 37657696 37657767 -107931521 + AluSc SINE Alu 219 298 -1 800 147 0 0 chr10 37657775 37657884 -107931404 + FLAM_C SINE Alu 2 110 -33 1593 159 47 0 chr10 37657889 37658146 -107931142 - AluJb SINE Alu -43 269 1 487 81 0 54 chr10 37658171 37658245 -107931043 + AluSq/x SINE Alu 62 131 -182 222 37 0 0 chr10 37658279 37658306 -107930982 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1043 161 60 28 chr10 37658613 37658831 -107930457 - AluJo SINE Alu -1 311 87 226 317 192 17 chr10 37658914 37659034 -107930254 + L2 LINE L2 3173 3313 0 249 275 119 37 chr10 37659044 37659339 -107929949 + L2 LINE L2 2263 2581 -733 359 274 97 65 chr10 37659545 37659787 -107929501 + L2 LINE L2 2926 3221 -92 2256 94 24 0 chr10 37659787 37660085 -107929203 + AluSc SINE Alu 1 305 -4 359 274 97 65 chr10 37660085 37660174 -107929114 + L2 LINE L2 3221 3306 -7 2262 95 3 0 chr10 37660453 37660747 -107928541 + AluSq SINE Alu 1 295 -18 183 42 0 0 chr10 37661827 37661851 -107927437 + (CGG)n Simple_repeat Simple_repeat 2 25 0 23 54 0 0 chr10 37661900 37661937 -107927351 + GC_rich Low_complexity Low_complexity 1 37 0 2057 192 50 62 chr10 37663078 37663183 -107926105 + Charlie1a DNA MER1_type 2 107 -2654 2011 105 7 40 chr10 37663183 37663487 -107925801 - AluSx SINE Alu -18 294 1 1873 138 0 34 chr10 37663495 37663815 -107925473 - AluJo SINE Alu -3 309 1 2057 192 50 62 chr10 37663815 37664175 -107925113 + Charlie1a DNA MER1_type 114 472 -2289 2387 191 95 106 chr10 37664175 37664910 -107924378 + LTR8A LTR ERV1 1 727 0 2057 192 50 62 chr10 37664910 37664949 -107924339 + Charlie1a DNA MER1_type 472 510 -945 1753 161 24 7 chr10 37664951 37665249 -107924039 + AluSq SINE Alu 11 313 0 1197 172 201 9 chr10 37665255 37665598 -107923690 + Charlie1a DNA MER1_type 958 1366 -89 1033 139 0 0 chr10 37665601 37665752 -107923536 + MSTA LTR MaLR 278 428 0 463 128 88 78 chr10 37665752 37665798 -107923490 + Charlie1a DNA MER1_type 1359 1403 -1358 2431 74 3 0 chr10 37665798 37666094 -107923194 - AluSq SINE Alu -16 297 1 463 128 88 78 chr10 37666094 37666143 -107923145 + Charlie1a DNA MER1_type 1403 1455 0 2043 139 3 25 chr10 37666593 37666909 -107922379 + AluSx SINE Alu 1 309 -3 2076 118 0 7 chr10 37667131 37667420 -107921868 - AluSx SINE Alu -25 287 1 1863 150 23 3 chr10 37667526 37667826 -107921462 + AluSx SINE Alu 1 306 -6 1677 193 0 26 chr10 37667882 37668193 -107921095 + AluJb SINE Alu 1 303 -9 257 114 0 148 chr10 37668205 37668293 -107920995 + L1MC3 LINE L1 6837 6911 -874 2265 107 3 0 chr10 37668369 37668669 -107920619 - AluSq SINE Alu -12 301 1 1482 122 13 4 chr10 37668671 37668900 -107920388 + LTR59 LTR ERV1 320 550 -47 882 137 14 14 chr10 37668934 37669073 -107920215 + FRAM SINE Alu 30 168 -8 888 146 146 0 chr10 37669074 37669238 -107920050 + L1MC3 LINE L1 7212 7399 -386 1805 171 7 0 chr10 37669239 37669568 -107919720 + AluSx SINE Alu 2 332 0 595 167 0 11 chr10 37670000 37670090 -107919198 + AluJ/FLAM SINE Alu 3 91 -221 2065 125 3 10 chr10 37670208 37670505 -107918783 + AluSq SINE Alu 1 295 -18 2083 120 3 3 chr10 37670670 37670970 -107918318 + AluSc SINE Alu 1 300 -9 1345 136 120 44 chr10 37671077 37671327 -107917961 + AluSx SINE Alu 36 304 -8 963 145 0 0 chr10 37671534 37671665 -107917623 - FLAM_C SINE Alu -2 131 1 37 0 0 0 chr10 37671675 37671712 -107917576 + AT_rich Low_complexity Low_complexity 1 37 0 2359 93 20 0 chr10 37672039 37672340 -107916948 + AluSx SINE Alu 1 307 -5 240 226 32 32 chr10 37672379 37672473 -107916815 - L1MD2 LINE L1 -81 6085 6016 315 122 0 0 chr10 37673524 37673565 -107915723 - Alu SINE Alu -251 49 9 1746 111 21 0 chr10 37673566 37673846 -107915442 + AluSx SINE Alu 50 334 0 2067 156 0 0 chr10 37673849 37674156 -107915132 + AluSx SINE Alu 1 307 -5 2279 111 0 0 chr10 37674162 37674460 -107914828 + AluSg SINE Alu 1 298 -12 1841 151 3 30 chr10 37674705 37674872 -107914416 - AluJo SINE Alu -15 297 140 2722 32 3 0 chr10 37674872 37675182 -107914106 - AluY SINE Alu 0 311 1 1841 151 3 30 chr10 37675182 37675319 -107913969 - AluJo SINE Alu -172 140 1 238 280 119 25 chr10 37675468 37675586 -107913702 - MER69A DNA AcHobo -40 137 9 1556 178 4 0 chr10 37675724 37675983 -107913305 + AluJo SINE Alu 1 260 -52 2081 106 4 0 chr10 37676313 37676588 -107912700 - AluSp SINE Alu -37 276 1 285 264 0 23 chr10 37676610 37676697 -107912591 + L3 LINE CR1 767 851 -726 2454 53 0 3 chr10 37676703 37677005 -107912283 + AluY SINE Alu 1 301 -10 1851 74 122 11 chr10 37677016 37677287 -107912001 + AluY SINE Alu 1 301 -10 1632 165 72 44 chr10 37677580 37677863 -107911425 + MLT1A1 LTR MaLR 1 301 -64 2199 86 0 49 chr10 37677863 37678190 -107911098 - AluY SINE Alu 0 311 1 1632 165 72 44 chr10 37678190 37678257 -107911031 + MLT1A1 LTR MaLR 301 365 0 2212 92 3 10 chr10 37678510 37678832 -107910456 - AluY SINE Alu 0 311 1 2531 68 0 0 chr10 37679159 37679469 -107909819 + AluY SINE Alu 1 310 -1 362 332 5 87 chr10 37679606 37679734 -107909554 - L2 LINE L2 -604 2710 2602 1905 155 16 7 chr10 37679734 37680043 -107909245 + AluJb SINE Alu 1 312 0 362 332 5 87 chr10 37680043 37680110 -107909178 - L2 LINE L2 -712 2602 2531 1075 194 95 32 chr10 37680180 37680433 -107908855 - MLT1F LTR MaLR -64 478 210 1500 171 4 0 chr10 37680490 37680730 -107908558 + AluJb SINE Alu 2 242 -70 254 118 0 0 chr10 37680771 37680829 -107908459 + AluJb SINE Alu 250 307 0 813 324 119 18 chr10 37680887 37681426 -107907862 - L2 LINE L2 0 3313 2709 1657 169 52 3 chr10 37681450 37681740 -107907548 + AluJb SINE Alu 1 304 -8 1818 180 7 87 chr10 37681780 37681842 -107907446 - MLT1B LTR MaLR -7 383 318 1995 153 3 7 chr10 37681842 37682149 -107907139 + AluSx SINE Alu 3 308 -4 1818 180 7 87 chr10 37682149 37682502 -107906786 - MLT1B LTR MaLR -72 318 1 685 241 169 23 chr10 37682502 37682768 -107906520 - L2 LINE L2 -654 2660 2356 1714 173 7 23 chr10 37682815 37683116 -107906172 - AluJo SINE Alu -16 296 1 1852 119 0 8 chr10 37683164 37683424 -107905864 + AluSx SINE Alu 1 258 -54 319 358 129 52 chr10 37683521 37683714 -107905574 - HAL1 LINE L1 -2077 430 223 1965 293 39 15 chr10 37683785 37684451 -107904837 + L1MEc LINE L1 40 721 -5675 2071 118 30 0 chr10 37684470 37684766 -107904522 + AluSc SINE Alu 1 305 -4 2118 113 0 10 chr10 37684772 37685063 -107904225 + AluSx SINE Alu 1 288 -24 923 199 38 94 chr10 37685244 37685306 -107903982 + L1MEc LINE L1 860 924 -5291 1445 134 29 151 chr10 37685306 37685513 -107903775 - AluYb8 SINE Alu 0 308 160 2291 77 0 48 chr10 37685513 37685823 -107903465 - AluY SINE Alu -16 295 1 1445 134 29 151 chr10 37685823 37685965 -107903323 - AluYb8 SINE Alu -148 160 2 923 199 38 94 chr10 37685965 37685977 -107903311 + L1MEc LINE L1 924 935 -5280 2298 95 13 0 chr10 37685977 37686282 -107903006 - AluSq SINE Alu -4 309 1 923 199 38 94 chr10 37686282 37686532 -107902756 + L1MEc LINE L1 935 1197 -5018 2023 118 0 79 chr10 37686532 37686861 -107902427 + AluSx SINE Alu 1 303 -9 923 199 38 94 chr10 37686861 37686882 -107902406 + L1MEc LINE L1 1197 1218 -4997 2149 104 3 3 chr10 37686882 37687171 -107902117 + AluSg SINE Alu 1 289 -21 923 199 38 94 chr10 37687171 37687214 -107902074 + L1MEc LINE L1 1218 1262 -4953 1814 162 10 7 chr10 37687214 37687522 -107901766 + AluJb SINE Alu 1 309 -3 923 199 38 94 chr10 37687522 37687663 -107901625 + L1MEc LINE L1 1262 1409 -4806 2173 112 0 7 chr10 37687663 37687957 -107901331 + AluSx SINE Alu 1 292 -20 923 199 38 94 chr10 37687957 37688086 -107901202 + L1MEc LINE L1 1409 3543 -2672 2072 104 31 7 chr10 37688287 37688574 -107900714 + AluSc SINE Alu 1 294 -15 291 331 13 13 chr10 37688617 37688774 -107900514 + L1MCc LINE L1 49 205 -6218 1463 161 42 11 chr10 37688872 37689132 -107900156 - AluJo SINE Alu -44 268 1 464 258 93 11 chr10 37689132 37689314 -107899974 + L1MCc LINE L1 2553 2749 -4373 1820 161 40 6 chr10 37689477 37689800 -107899488 - L1MC1 LINE L1 0 6333 6000 393 231 160 6 chr10 37689847 37690003 -107899285 - L1MEd LINE L1 -4885 1234 1055 1229 184 90 30 chr10 37691163 37691479 -107897809 - AluJo SINE Alu 0 332 1 843 213 6 0 chr10 37691834 37691998 -107897290 + AluSg/x SINE Alu 135 299 -10 1778 150 7 17 chr10 37692228 37692522 -107896766 + AluJb SINE Alu 14 304 -8 1383 123 9 23 chr10 37692825 37693044 -107896244 - AluSg/x SINE Alu -11 299 84 279 292 123 32 chr10 37693044 37693198 -107896090 - MIR SINE MIR -32 230 63 1163 152 0 0 chr10 37693270 37693435 -107895853 + AluJb SINE Alu 141 305 -7 307 377 91 7 chr10 37693910 37694064 -107895224 + MIR3 SINE MIR 9 175 -33 403 150 57 121 chr10 37694106 37694225 -107895063 - MIR SINE MIR 0 262 151 1839 163 0 14 chr10 37694225 37694544 -107894744 - AluSx SINE Alu 0 315 1 403 150 57 121 chr10 37694544 37694563 -107894725 - MIR SINE MIR -111 151 132 1136 147 0 12 chr10 37694564 37694734 -107894554 + AluJb SINE Alu 109 276 -36 207 0 0 0 chr10 37694761 37694784 -107894504 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr10 37694860 37694882 -107894406 + AT_rich Low_complexity Low_complexity 1 22 0 248 200 40 20 chr10 37695137 37695187 -107894101 + L2 LINE L2 3207 3257 -15 222 320 88 46 chr10 37695313 37695597 -107893691 - L2 LINE L2 -932 2382 2087 748 209 7 29 chr10 37695645 37695784 -107893504 + FRAM SINE Alu 11 146 -30 704 159 79 24 chr10 37695905 37696031 -107893257 + AluJo SINE Alu 4 136 -176 208 240 198 33 chr10 37696641 37696762 -107892526 - MIR SINE MIR -74 188 48 943 195 54 34 chr10 37697185 37697390 -107891898 - MER6B DNA MER2_type -1 209 1 2022 103 50 0 chr10 37697436 37697717 -107891571 - AluSx SINE Alu -17 295 1 698 146 55 0 chr10 37697743 37697853 -107891435 - FLAM_C SINE Alu -16 117 2 295 250 0 15 chr10 37697968 37698036 -107891252 + MLT1D LTR MaLR 254 320 -185 721 128 24 16 chr10 37698037 37698162 -107891126 + AluJb SINE Alu 152 277 -35 245 349 0 8 chr10 37698307 37698436 -107890852 + C-rich Low_complexity Low_complexity 4 131 0 206 297 18 27 chr10 37698850 37698961 -107890327 + G-rich Low_complexity Low_complexity 3 112 0 2236 74 28 0 chr10 37699456 37699739 -107889549 - AluSg SINE Alu -19 291 1 2566 51 0 6 chr10 37700114 37700426 -107888862 - AluY SINE Alu -1 310 1 2313 102 3 0 chr10 37701516 37701821 -107887467 + AluSp SINE Alu 1 306 -7 1444 189 40 18 chr10 37702107 37702481 -107886807 + Tigger3(Golem) DNA MER2_type 7 3027 -2 2118 88 48 10 chr10 37703535 37703830 -107885458 + AluSg SINE Alu 1 306 -4 2023 128 31 0 chr10 37704911 37705201 -107884087 - AluSx SINE Alu -13 299 1 1083 139 47 0 chr10 37705651 37705823 -107883465 - AluSg/x SINE Alu -7 305 126 2172 108 0 3 chr10 37705824 37706119 -107883169 - AluSx SINE Alu -18 294 1 249 164 98 0 chr10 37706229 37706290 -107882998 - L1MC4 LINE L1 -291 7751 7685 2302 108 0 0 chr10 37706358 37706665 -107882623 + AluSx SINE Alu 1 307 -5 387 103 52 0 chr10 37707045 37707103 -107882185 + U7 snRNA snRNA 1 61 -2 775 189 39 0 chr10 37707211 37707338 -107881950 + FLAM_C SINE Alu 2 133 0 229 313 87 48 chr10 37707346 37707576 -107881712 - L2 LINE L2 -1209 2105 1867 180 0 0 0 chr10 37708392 37708412 -107880876 + (T)n Simple_repeat Simple_repeat 1 20 0 1451 209 26 0 chr10 37708447 37708715 -107880573 - AluJb SINE Alu -37 275 1 22 56 0 0 chr10 37708766 37708802 -107880486 + AT_rich Low_complexity Low_complexity 1 36 0 25 0 0 0 chr10 37709299 37709324 -107879964 + AT_rich Low_complexity Low_complexity 1 25 0 180 200 0 0 chr10 37709551 37709591 -107879697 + (TA)n Simple_repeat Simple_repeat 2 41 0 1213 118 28 0 chr10 37710126 37710304 -107878984 - AluSg/x SINE Alu -10 300 118 23 54 0 0 chr10 37710304 37710341 -107878947 + AT_rich Low_complexity Low_complexity 1 37 0 615 168 11 0 chr10 37710342 37710437 -107878851 + AluJ/FLAM SINE Alu 2 97 -215 331 128 0 0 chr10 37710458 37710505 -107878783 + FLAM_A SINE Alu 81 127 -6 30 45 0 0 chr10 37710524 37710568 -107878720 + AT_rich Low_complexity Low_complexity 1 44 0 2041 134 14 0 chr10 37710728 37711020 -107878268 - AluSx SINE Alu -16 296 1 219 292 46 0 chr10 37711507 37711572 -107877716 + MIR SINE MIR 189 256 -6 182 261 102 57 chr10 37711766 37711854 -107877434 - L2 LINE L2 -14 3258 3167 21 0 0 0 chr10 37712066 37712087 -107877201 + AT_rich Low_complexity Low_complexity 1 21 0 478 356 58 53 chr10 37712132 37712531 -107876757 - L2 LINE L2 -36 3236 2836 384 269 60 22 chr10 37712574 37712708 -107876580 + MIR SINE MIR 2 140 -122 303 85 43 0 chr10 37712718 37712765 -107876523 - AluSg SINE Alu -4 298 250 205 225 0 0 chr10 37712812 37712852 -107876436 + MIR SINE MIR 219 258 -4 1564 308 155 43 chr10 37712865 37714218 -107875070 - L2 LINE L2 -529 2785 1585 1831 162 0 7 chr10 37714218 37714508 -107874780 - AluJb SINE Alu -24 288 1 1564 308 155 43 chr10 37714508 37714624 -107874664 - L2 LINE L2 -1729 1585 1483 1919 102 0 0 chr10 37714624 37714869 -107874419 - AluSg SINE Alu -65 245 1 1564 308 155 43 chr10 37714869 37715477 -107873811 - L2 LINE L2 -1831 1483 389 224 273 102 31 chr10 37716054 37716182 -107873106 - L2 LINE L2 -1047 2267 2131 2270 97 7 0 chr10 37716479 37716779 -107872509 + AluSx SINE Alu 1 302 -10 2040 118 16 7 chr10 37717096 37717402 -107871886 + AluSx SINE Alu 1 309 -3 418 301 98 35 chr10 37717448 37717621 -107871667 - MER5A DNA MER1_type -2 187 4 181 247 214 34 chr10 37717642 37717731 -107871557 + L2 LINE L2 3204 3308 -5 317 320 0 47 chr10 37717907 37718057 -107871231 - MER103 DNA DNA -1 165 23 2594 48 0 10 chr10 37718640 37718951 -107870337 - AluY SINE Alu -3 308 1 22 94 0 0 chr10 37718959 37719023 -107870265 + AT_rich Low_complexity Low_complexity 1 64 0 2224 119 71 0 chr10 37719571 37719908 -107869380 - MER46B DNA MER2_type 0 236 1 462 313 125 57 chr10 37720591 37720974 -107868314 - L2 LINE L2 0 3272 2864 450 0 0 0 chr10 37721488 37721538 -107867750 + (CA)n Simple_repeat Simple_repeat 2 51 0 568 158 115 22 chr10 37721544 37721683 -107867605 - L1ME4a LINE L1 -15 6106 5955 810 178 0 22 chr10 37721793 37721928 -107867360 - FLAM_C SINE Alu -1 132 1 1950 147 3 0 chr10 37722138 37722430 -107866858 + AluSx SINE Alu 1 293 -19 1814 152 6 51 chr10 37722934 37723272 -107866016 - AluSx SINE Alu 0 312 1 285 204 104 104 chr10 37724475 37724551 -107864737 - L1MC5 LINE L1 -48 7913 7838 1533 140 41 92 chr10 37724551 37724865 -107864423 + AluJo SINE Alu 1 298 -14 285 204 104 104 chr10 37724865 37725038 -107864250 - L1MC5 LINE L1 -122 7839 7664 940 114 108 6 chr10 37726944 37727110 -107862178 + L1MB2 LINE L1 5985 6167 -4 267 31 0 0 chr10 37727202 37727234 -107862054 + (TTTTC)n Simple_repeat Simple_repeat 2 33 0 2031 101 4 14 chr10 37727244 37727521 -107861767 - AluSc SINE Alu -35 274 1 2367 101 0 0 chr10 37727523 37727831 -107861457 - AluY SINE Alu -3 308 1 1792 189 0 10 chr10 37727836 37728142 -107861146 - AluJo SINE Alu -9 303 1 5469 157 26 48 chr10 37728513 37728941 -107860347 + L1 LINE L1 3668 4104 -2042 1943 136 0 16 chr10 37728941 37729249 -107860039 + AluJb SINE Alu 1 303 -9 5469 157 26 48 chr10 37729249 37729893 -107859395 + L1 LINE L1 4104 4717 -1429 219 103 0 0 chr10 37730391 37730430 -107858858 + (T)n Simple_repeat Simple_repeat 1 39 0 3586 153 33 15 chr10 37730873 37731541 -107857747 + L1 LINE L1 4696 5375 -771 379 212 0 0 chr10 37731544 37731610 -107857678 - Tigger3b DNA MER2_type 0 1232 1167 2301 128 37 3 chr10 37731646 37731999 -107857289 - Tigger3b DNA MER2_type -51 1180 816 1147 146 12 6 chr10 37732002 37732173 -107857115 - AluJo SINE Alu -21 291 120 2937 120 136 7 chr10 37732175 37732735 -107856553 - Tigger3b DNA MER2_type -404 827 196 1097 142 12 0 chr10 37732742 37732911 -107856377 - AluSg/x SINE Alu -25 285 115 847 126 16 60 chr10 37732918 37733100 -107856188 + AluSg/x SINE Alu 113 286 -26 17479 42 5 5 chr10 37733275 37735000 -107854288 - L1P2 LINE L1 -641 5514 3786 2260 94 0 10 chr10 37735000 37735299 -107853989 - AluY SINE Alu -15 296 1 17479 42 5 5 chr10 37735299 37735840 -107853448 - L1P2 LINE L1 -2369 3786 3247 2186 119 0 0 chr10 37736196 37736491 -107852797 - AluSx SINE Alu -2 310 16 6064 190 74 30 chr10 37737354 37738653 -107850635 + Charlie1a DNA MER1_type 2 1367 -1394 799 261 77 0 chr10 37738653 37738848 -107850440 - MER63A DNA MER1_type 0 210 1 6064 190 74 30 chr10 37738848 37738935 -107850353 + Charlie1a DNA MER1_type 1367 1449 -6 2318 89 3 0 chr10 37740199 37740492 -107848796 + AluY SINE Alu 1 294 -17 2533 67 0 6 chr10 37741430 37741742 -107847546 - AluY SINE Alu -1 310 1 724 202 0 16 chr10 37742503 37742632 -107846656 - AluJb SINE Alu -185 127 1 303 240 41 50 chr10 37742738 37742859 -107846429 + MIR SINE MIR 72 191 -71 206 259 86 43 chr10 37743737 37743876 -107845412 + L2 LINE L2 3127 3271 -1 218 271 62 54 chr10 37746224 37746353 -107842935 + MIR SINE MIR 68 197 -65 1803 161 10 16 chr10 37746616 37746920 -107842368 + AluJo SINE Alu 1 302 -10 23 0 0 0 chr10 37747431 37747454 -107841834 + AT_rich Low_complexity Low_complexity 1 23 0 2128 109 3 0 chr10 37748816 37749125 -107840163 + AluSq SINE Alu 1 310 0 692 155 0 127 chr10 37749140 37749282 -107840006 + FLAM_A SINE Alu 1 124 -9 297 0 0 0 chr10 37750057 37750090 -107839198 + (TTCA)n Simple_repeat Simple_repeat 2 34 0 2301 83 10 3 chr10 37750127 37750427 -107838861 - AluSp SINE Alu -11 302 1 229 143 0 0 chr10 37750775 37750810 -107838478 - MER20 DNA MER1_type 0 219 185 256 125 45 11 chr10 37751625 37751713 -107837575 + (TA)n Simple_repeat Simple_repeat 1 91 0 304 186 48 0 chr10 37751738 37751905 -107837383 + (TA)n Simple_repeat Simple_repeat 2 176 0 53 30 0 0 chr10 37751905 37751972 -107837316 + AT_rich Low_complexity Low_complexity 1 67 0 483 29 80 51 chr10 37751972 37752147 -107837141 + (TA)n Simple_repeat Simple_repeat 1 180 0 22 0 0 0 chr10 37752147 37752169 -107837119 + AT_rich Low_complexity Low_complexity 1 22 0 255 206 137 10 chr10 37752285 37752387 -107836901 + AluSp SINE Alu 121 235 -68 1136 143 14 32 chr10 37752404 37752620 -107836668 + AluSg/x SINE Alu 85 296 -16 4992 143 33 15 chr10 37752620 37753498 -107835790 + L1MA8 LINE L1 5393 6286 -5 1918 134 16 23 chr10 37753879 37754185 -107835103 + AluJb SINE Alu 6 309 -3 1506 163 95 25 chr10 37754347 37754483 -107834805 + AluJo SINE Alu 1 126 -186 2312 96 6 10 chr10 37754483 37754795 -107834493 + AluSq SINE Alu 1 311 -2 1506 163 95 25 chr10 37754795 37754941 -107834347 + AluJo SINE Alu 126 303 -9 245 304 13 0 chr10 37755139 37755218 -107834070 + MIR SINE MIR 182 261 -1 2224 125 103 45 chr10 37755680 37755714 -107833574 - MSTB LTR MaLR -4 422 391 2063 114 6 25 chr10 37755714 37756029 -107833259 + AluSx SINE Alu 1 309 -3 2224 125 103 45 chr10 37756029 37756393 -107832895 - MSTB LTR MaLR -35 391 1 25 0 0 0 chr10 37756650 37756675 -107832613 + AT_rich Low_complexity Low_complexity 1 25 0 2008 127 7 13 chr10 37757226 37757525 -107831763 + AluSx SINE Alu 1 297 -15 922 163 6 18 chr10 37757525 37757691 -107831597 + AluSq SINE Alu 134 297 -16 2148 113 3 0 chr10 37757805 37758087 -107831201 + AluSx SINE Alu 1 283 -29 1524 17 0 6 chr10 37758844 37758865 -107830423 - L1PA3 LINE L1 -251 5904 5884 15827 49 11 5 chr10 37758865 37760911 -107828377 - L1MB1 LINE L1 -306 5883 3777 2260 94 0 10 chr10 37760911 37761210 -107828078 - AluY SINE Alu -15 296 1 15827 49 11 5 chr10 37761210 37761555 -107827733 - L1MB1 LINE L1 -2412 3777 3436 2879 100 2 9 chr10 37761667 37762088 -107827200 - L1P4 LINE L1 -372 5791 5374 536 250 40 0 chr10 37762096 37762244 -107827044 + L2 LINE L2 1228 1381 -1933 2129 122 0 10 chr10 37762245 37762541 -107826747 - AluSx SINE Alu -18 294 2 2064 298 109 31 chr10 37762655 37763063 -107826225 - HERV16 LTR ERVL -1905 3091 2716 2513 108 13 35 chr10 37763063 37763435 -107825853 - THE1B LTR MaLR 0 364 1 2064 298 109 31 chr10 37763435 37764094 -107825194 - HERV16 LTR ERVL -2280 2716 2240 2297 113 0 7 chr10 37764094 37764403 -107824885 - AluSx SINE Alu -5 307 1 2064 298 109 31 chr10 37764403 37764519 -107824769 - HERV16 LTR ERVL -2756 2240 2134 2324 46 42 3 chr10 37764519 37764804 -107824484 + AluY SINE Alu 1 296 -15 625 270 134 54 chr10 37764811 37765206 -107824082 + L1MC/D LINE L1 5284 5744 -426 1683 131 24 40 chr10 37765206 37765503 -107823785 + AluSq SINE Alu 21 312 -1 625 270 134 54 chr10 37765503 37765606 -107823682 + L1MC/D LINE L1 5744 5837 -333 1942 143 7 0 chr10 37765716 37766009 -107823279 + AluJo SINE Alu 1 295 -17 440 244 79 107 chr10 37766014 37766305 -107822983 + MLT1J LTR MaLR 229 511 0 881 161 0 7 chr10 37766493 37766630 -107822658 - AluJo SINE Alu -176 136 1 191 22 67 44 chr10 37766831 37766876 -107822412 + A-rich Low_complexity Low_complexity 2 47 0 374 295 37 83 chr10 37767277 37767561 -107821727 + L1M4 LINE L1 3649 3917 -2229 2195 94 3 7 chr10 37767762 37768076 -107821212 - AluSx SINE Alu 0 313 1 492 109 0 0 chr10 37768096 37768160 -107821128 - U6 snRNA snRNA -43 64 1 1753 156 10 49 chr10 37768648 37768789 -107820499 + AluJo SINE Alu 1 146 -166 2086 95 35 0 chr10 37768789 37769072 -107820216 + AluSp SINE Alu 1 293 -20 1753 156 10 49 chr10 37769072 37769238 -107820050 + AluJo SINE Alu 146 296 -16 222 268 146 12 chr10 37769571 37769653 -107819635 + MER5A DNA MER1_type 74 166 -23 2436 138 62 7 chr10 37769657 37770063 -107819225 + MSTC LTR MaLR 1 428 0 2331 89 0 7 chr10 37770176 37770480 -107818808 + AluSx SINE Alu 1 302 -10 768 226 12 24 chr10 37770491 37770655 -107818633 + FRAM SINE Alu 1 162 -14 2272 60 0 3 chr10 37770655 37770975 -107818313 + AluY SINE Alu 1 319 0 7391 163 31 75 chr10 37770977 37771577 -107817711 - LTR49-int LTR ERV1 -1915 4416 3791 1951 151 0 0 chr10 37771577 37771869 -107817419 - AluSx SINE Alu -10 302 11 7391 163 31 75 chr10 37771869 37772501 -107816787 - LTR49-int LTR ERV1 -2540 3791 3133 1521 199 0 7 chr10 37772501 37772783 -107816505 + AluJb SINE Alu 29 308 -4 7391 163 31 75 chr10 37772783 37773068 -107816220 - LTR49-int LTR ERV1 -3198 3133 2978 2484 77 3 0 chr10 37773068 37773379 -107815909 + AluSp SINE Alu 1 312 -1 7391 163 31 75 chr10 37773379 37773549 -107815739 - LTR49-int LTR ERV1 -3353 2978 2802 381 181 69 0 chr10 37773567 37773639 -107815649 - LTR49-int LTR ERV1 -4739 1592 1516 367 274 0 0 chr10 37773643 37773716 -107815572 - tRNA-Glu-GAG tRNA tRNA 0 75 3 1980 152 17 51 chr10 37773716 37774008 -107815280 - LTR49-int LTR ERV1 -3271 1609 1309 2149 107 3 10 chr10 37774008 37774308 -107814980 + AluSx SINE Alu 1 298 -14 1980 152 17 51 chr10 37774308 37774702 -107814586 - LTR49-int LTR ERV1 -3571 1309 575 1197 140 0 0 chr10 37774703 37774881 -107814407 + AluSg/x SINE Alu 131 308 -2 1831 168 54 21 chr10 37774882 37775270 -107814018 - LTR49-int LTR ERV1 -4629 1317 15 3325 138 49 37 chr10 37775286 37775444 -107813844 - LTR49 LTR ERV1 0 595 440 2154 102 17 3 chr10 37775444 37775738 -107813550 - AluSx SINE Alu -12 300 3 3325 138 49 37 chr10 37775738 37775749 -107813539 - LTR49 LTR ERV1 -155 440 431 2494 58 0 10 chr10 37775749 37776043 -107813245 - AluY SINE Alu -20 291 1 3325 138 49 37 chr10 37776043 37776460 -107812828 - LTR49 LTR ERV1 -164 431 1 456 188 21 0 chr10 37776706 37776802 -107812486 - MER53 DNA DNA -90 99 2 22 35 0 0 chr10 37776806 37776835 -107812453 + AT_rich Low_complexity Low_complexity 1 29 0 1447 82 10 5 chr10 37777031 37777227 -107812061 - AluSg/x SINE Alu -4 306 110 2233 77 0 21 chr10 37777249 37777555 -107811733 + AluSc SINE Alu 1 300 0 2255 112 3 10 chr10 37777617 37777931 -107811357 + AluSx SINE Alu 1 312 0 1505 147 98 11 chr10 37777944 37778210 -107811078 + AluJo SINE Alu 1 289 -23 411 149 27 0 chr10 37778357 37778431 -107810857 - AluSx SINE Alu -1 310 235 1510 97 0 5 chr10 37778431 37778626 -107810662 - AluSx SINE Alu -118 194 1 873 197 93 73 chr10 37778801 37778956 -107810332 - AluJo SINE Alu -7 295 130 1636 186 0 47 chr10 37778956 37779278 -107810010 - AluJo SINE Alu -5 307 1 873 197 93 73 chr10 37779278 37779411 -107809877 - AluJo SINE Alu -172 130 1 2021 122 36 10 chr10 37779720 37779844 -107809444 + AluSx SINE Alu 1 120 -192 2439 71 0 7 chr10 37779844 37780141 -107809147 + AluY SINE Alu 1 295 -16 2021 122 36 10 chr10 37780141 37780319 -107808969 + AluSx SINE Alu 120 311 -1 972 189 0 0 chr10 37780358 37780522 -107808766 - FRAM SINE Alu -12 164 1 423 292 33 0 chr10 37780713 37780833 -107808455 + L2 LINE L2 3190 3313 0 2792 174 56 33 chr10 37780862 37780927 -107808361 - L1MB2 LINE L1 -4 6167 6105 1903 171 13 0 chr10 37780927 37781231 -107808057 - AluSx SINE Alu -4 308 1 2792 174 56 33 chr10 37781231 37781804 -107807484 - L1MB2 LINE L1 -66 6105 5514 2220 101 0 16 chr10 37782152 37782459 -107806829 + AluSg SINE Alu 1 302 -8 2271 141 95 0 chr10 37782600 37782990 -107806298 - MSTA LTR MaLR -1 427 1 2362 112 0 0 chr10 37783099 37783411 -107805877 + AluSx SINE Alu 1 312 0 1956 144 30 3 chr10 37784081 37784380 -107804908 + AluJo SINE Alu 1 307 -5 2522 61 0 0 chr10 37784380 37784729 -107804559 + AluY SINE Alu 17 365 0 2250 110 0 16 chr10 37785131 37785449 -107803839 + AluSq SINE Alu 1 313 0 818 208 0 0 chr10 37785472 37785626 -107803662 + AluJb SINE Alu 147 300 -12 1439 180 51 31 chr10 37785717 37786011 -107803277 - AluSx SINE Alu -2 300 1 2048 128 0 42 chr10 37786541 37786682 -107802606 + AluSx SINE Alu 5 150 -162 2517 73 0 0 chr10 37786682 37786985 -107802303 + AluY SINE Alu 1 303 -8 2048 128 0 42 chr10 37786985 37787155 -107802133 + AluSx SINE Alu 150 303 -9 517 319 28 22 chr10 37787203 37787385 -107801903 + MER5A DNA MER1_type 7 189 0 570 78 13 0 chr10 37787729 37787806 -107801482 - U6 snRNA snRNA -1 106 29 679 211 0 0 chr10 37787885 37788008 -107801280 + FLAM_C SINE Alu 2 124 -19 1881 181 0 0 chr10 37788359 37788658 -107800630 - AluJb SINE Alu -13 299 1 458 157 22 11 chr10 37788732 37788821 -107800467 - Cheshire DNA MER1_type -16 2404 2315 * 7276 181 41 31 chr10 37788820 37789053 -107800235 - Cheshire DNA MER1_type -343 2077 1848 2589 55 0 3 chr10 37789053 37789362 -107799926 + AluY SINE Alu 1 308 -3 7276 181 41 31 chr10 37789362 37790029 -107799259 - Cheshire DNA MER1_type -572 1848 1189 1430 175 3 92 chr10 37790029 37790344 -107798944 - AluJo SINE Alu -22 290 4 7276 181 41 31 chr10 37790344 37790644 -107798644 - Cheshire DNA MER1_type -1231 1189 894 2520 60 0 7 chr10 37790644 37790946 -107798342 - AluY SINE Alu -11 300 1 7276 181 41 31 chr10 37790946 37791318 -107797970 - Cheshire DNA MER1_type -1526 894 487 1942 148 19 13 chr10 37791320 37791630 -107797658 + AluJb SINE Alu 1 312 0 7148 155 33 90 chr10 37791640 37792087 -107797201 - L1M4 LINE L1 -3267 3115 2644 1831 127 91 7 chr10 37792087 37792363 -107796925 - AluSx SINE Alu -9 303 5 7148 155 33 90 chr10 37792363 37792378 -107796910 - L1M4 LINE L1 -3738 2644 2630 1851 171 0 0 chr10 37792378 37792664 -107796624 - AluJb SINE Alu -26 286 1 7148 155 33 90 chr10 37792664 37793223 -107796065 - L1M4 LINE L1 -3752 2630 2041 2320 94 7 7 chr10 37793223 37793532 -107795756 + AluSg1 SINE Alu 1 309 0 7148 155 33 90 chr10 37793532 37794079 -107795209 - L1M4 LINE L1 -4341 2041 1711 746 220 0 0 chr10 37794079 37794211 -107795077 - FLAM_A SINE Alu -1 132 1 7148 155 33 90 chr10 37794211 37794855 -107794433 - L1M4 LINE L1 -4671 1711 1032 660 109 0 0 chr10 37794855 37794947 -107794341 + AluSg/x SINE Alu 206 297 -13 3580 177 50 33 chr10 37794951 37795432 -107793856 - L1M4 LINE L1 -5620 764 264 2115 96 20 3 chr10 37795432 37795724 -107793564 + AluSg SINE Alu 5 301 -9 3580 177 50 33 chr10 37795724 37795975 -107793313 - L1M4 LINE L1 -6120 264 19 1104 192 123 0 chr10 37796055 37796258 -107793030 - AluJo SINE Alu -84 228 1 2244 108 0 29 chr10 37796265 37796581 -107792707 - AluSx SINE Alu -5 307 1 215 386 0 11 chr10 37797312 37797400 -107791888 + MER5B DNA MER1_type 6 92 -86 1331 221 42 0 chr10 37797619 37797907 -107791381 + AluJb SINE Alu 12 310 0 1408 169 0 66 chr10 37797914 37798009 -107791279 + AluJo SINE Alu 37 137 -175 2169 114 13 7 chr10 37798009 37798307 -107790981 - AluSx SINE Alu -12 300 1 1408 169 0 66 chr10 37798307 37798483 -107790805 + AluJo SINE Alu 137 290 -22 2216 128 0 0 chr10 37798509 37798815 -107790473 + AluSq SINE Alu 1 306 -7 1572 136 21 0 chr10 37798817 37799053 -107790235 + AluSg/x SINE Alu 65 305 -5 1871 158 0 11 chr10 37799093 37799437 -107789851 - AluSx SINE Alu 0 341 1 226 281 16 0 chr10 37799697 37799712 -107789576 + GA-rich Low_complexity Low_complexity 3 16 -51 1869 135 0 50 chr10 37799712 37799851 -107789437 + AluJo SINE Alu 1 145 -167 2555 68 0 3 chr10 37799851 37800161 -107789127 + AluY SINE Alu 1 309 -2 1869 135 0 50 chr10 37800161 37800347 -107788941 + AluJo SINE Alu 145 312 0 226 281 16 0 chr10 37800347 37800395 -107788893 + GA-rich Low_complexity Low_complexity 16 67 0 4043 84 25 4 chr10 37800454 37801012 -107788276 - L1PA11 LINE L1 -4 6170 5601 956 18 0 0 chr10 37801013 37801124 -107788164 - L1PA4 LINE L1 0 6155 6045 2397 82 27 62 chr10 37801124 37801424 -107787864 - L1PA11 LINE L1 -551 5623 5335 1740 117 101 0 chr10 37801424 37801705 -107787583 - AluSx SINE Alu 0 307 1 2397 82 27 62 chr10 37801705 37801883 -107787405 - L1PA11 LINE L1 -839 5335 5152 2213 103 0 67 chr10 37802845 37803176 -107786112 - AluSx SINE Alu -3 309 1 2032 105 72 4 chr10 37803599 37803876 -107785412 + AluSx SINE Alu 4 299 -13 22 0 0 0 chr10 37804328 37804350 -107784938 + AT_rich Low_complexity Low_complexity 1 22 0 297 240 8 83 chr10 37805124 37805245 -107784043 + MIR SINE MIR 20 131 -77 23 0 0 0 chr10 37806042 37806065 -107783223 + AT_rich Low_complexity Low_complexity 1 23 0 1984 152 0 3 chr10 37806135 37806431 -107782857 + AluSx SINE Alu 1 295 -17 782 117 0 8 chr10 37806570 37806690 -107782598 - L1PB3 LINE L1 -1 6153 6035 575 196 0 15 chr10 37806951 37807084 -107782204 - L1MB8 LINE L1 -8 6170 6040 23 0 0 0 chr10 37807127 37807150 -107782138 + AT_rich Low_complexity Low_complexity 1 23 0 1729 174 43 0 chr10 37807151 37807432 -107781856 - AluJo SINE Alu -19 293 1 764 203 44 6 chr10 37807432 37807590 -107781698 + MLT1E LTR MaLR 429 592 -1 496 327 6 0 chr10 37807591 37807756 -107781532 + ERVL LTR ERVL 4214 4379 -1385 1165 147 0 0 chr10 37808489 37808659 -107780629 + FRAM SINE Alu 1 170 -6 306 219 27 14 chr10 37808792 37808865 -107780423 + LTR16A LTR ERVL 56 129 -321 316 289 139 12 chr10 37808920 37809086 -107780202 + LTR16A LTR ERVL 246 432 -18 861 265 183 41 chr10 37809302 37809660 -107779628 + L1M4 LINE L1 3589 3895 -2251 2175 111 46 32 chr10 37809660 37810030 -107779258 + THE1C LTR MaLR 1 375 0 861 265 183 41 chr10 37810030 37810621 -107778667 + L1M4 LINE L1 3895 4673 -1473 1476 184 44 23 chr10 37810621 37811066 -107778222 + MLT1D LTR MaLR 1 505 0 2105 141 10 0 chr10 37811350 37811655 -107777633 + AluSx SINE Alu 1 308 -4 248 275 88 21 chr10 37811670 37811910 -107777378 + L1M4 LINE L1 5024 5279 -867 2133 118 3 20 chr10 37811914 37812218 -107777070 - AluSx SINE Alu -13 299 1 538 115 48 0 chr10 37812684 37812849 -107776439 + (TA)n Simple_repeat Simple_repeat 2 174 0 2087 118 21 0 chr10 37812873 37813160 -107776128 - AluSq SINE Alu -20 293 1 222 37 0 0 chr10 37813261 37813288 -107776000 + (TTTTC)n Simple_repeat Simple_repeat 4 30 0 882 120 0 0 chr10 37813288 37813405 -107775883 - AluJb SINE Alu -195 117 1 2236 83 6 51 chr10 37814260 37814574 -107774714 - AluSx SINE Alu -12 300 1 2096 110 3 3 chr10 37815105 37815396 -107773892 - AluSx SINE Alu -1 311 21 336 282 50 28 chr10 37815789 37815970 -107773318 - L1M4 LINE L1 -1029 5117 4933 198 103 0 0 chr10 37816218 37816247 -107773041 + (TAA)n Simple_repeat Simple_repeat 2 30 0 2289 86 10 3 chr10 37816270 37816562 -107772726 - AluY SINE Alu -17 294 1 198 0 0 0 chr10 37816687 37816709 -107772579 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 449 255 99 70 chr10 37816755 37817127 -107772161 - L1M4 LINE L1 -1701 4445 4063 1950 158 0 0 chr10 37817935 37818247 -107771041 - AluSx SINE Alu 0 314 3 898 181 0 12 chr10 37818249 37818409 -107770879 - MLT1A1 LTR MaLR -207 158 1 212 362 0 0 chr10 37818774 37818832 -107770456 + L2 LINE L2 3210 3267 -5 2420 82 10 3 chr10 37819422 37819725 -107769563 + AluSx SINE Alu 5 309 -3 446 179 13 0 chr10 37820017 37820095 -107769193 - MER116 DNA Mariner 0 80 2 243 0 0 0 chr10 37820502 37820529 -107768759 + (TTA)n Simple_repeat Simple_repeat 2 28 0 202 222 0 28 chr10 37821041 37821113 -107768175 + CT-rich Low_complexity Low_complexity 4 73 0 2075 41 49 0 chr10 37822466 37822712 -107766576 - AluY SINE Alu -8 303 46 459 0 0 0 chr10 37823017 37823068 -107766220 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 2397 35 3 21 chr10 37823070 37823357 -107765931 - AluY SINE Alu -29 282 1 467 264 108 22 chr10 37823504 37823735 -107765553 + MER112 DNA MER1_type 2 252 -4 2433 78 0 0 chr10 37823843 37824138 -107765150 + AluSg SINE Alu 1 295 -15 2351 94 3 0 chr10 37824468 37824767 -107764521 + AluSx SINE Alu 1 300 -12 22 56 0 0 chr10 37824999 37825035 -107764253 + AT_rich Low_complexity Low_complexity 1 36 0 195 250 83 0 chr10 37825263 37825323 -107763965 - MIR SINE MIR -147 115 51 2413 90 7 0 chr10 37825488 37825789 -107763499 - AluSq SINE Alu -10 303 1 540 162 86 0 chr10 37825946 37826063 -107763225 + L1MA9 LINE L1 6184 6310 -2 636 223 223 9 chr10 37826937 37827148 -107762140 - MIR SINE MIR -6 256 1 216 263 53 53 chr10 37827540 37827635 -107761653 - L2 LINE L2 -5 3267 3173 820 169 0 0 chr10 37828024 37828154 -107761134 - FLAM_C SINE Alu -2 131 2 428 282 201 10 chr10 37828411 37828620 -107760668 - MARNA DNA Mariner -52 534 286 1878 172 30 0 chr10 37828642 37828945 -107760343 - AluJb SINE Alu 0 312 1 2149 129 0 0 chr10 37829011 37829314 -107759974 + AluSg SINE Alu 1 303 -7 186 71 0 0 chr10 37829315 37829343 -107759945 + (T)n Simple_repeat Simple_repeat 1 28 0 2195 117 7 0 chr10 37829919 37830217 -107759071 + AluSc SINE Alu 1 300 -9 1000 237 117 30 chr10 37831218 37831276 -107758012 - MER63B DNA MER1_type -626 436 384 2094 124 3 3 chr10 37831276 37831566 -107757722 + AluSx SINE Alu 1 290 -22 2630 41 0 0 chr10 37831566 37831860 -107757428 + AluY SINE Alu 1 294 -17 1000 237 117 30 chr10 37831567 37832202 -107757086 - MER63B DNA MER1_type -678 384 1 2371 71 0 7 chr10 37832712 37833008 -107756280 + AluY SINE Alu 3 296 -15 242 104 0 21 chr10 37833035 37833083 -107756205 + (TAAAAA)n Simple_repeat Simple_repeat 3 49 0 2214 103 7 3 chr10 37833093 37833383 -107755905 + AluSc SINE Alu 1 291 -18 33 56 0 0 chr10 37833973 37834027 -107755261 + AT_rich Low_complexity Low_complexity 1 54 0 375 293 98 56 chr10 37834177 37834443 -107754845 - MLT1J LTR MaLR -140 371 95 511 265 70 28 chr10 37834508 37834723 -107754565 - MIR SINE MIR -24 238 15 2272 131 0 0 chr10 37838863 37839168 -107750120 - AluSx SINE Alu -7 305 1 438 230 52 37 chr10 37839758 37839893 -107749395 - MLT1L LTR MaLR -50 565 429 728 105 0 0 chr10 37839978 37840083 -107749205 - AluY SINE Alu -2 309 205 2012 101 4 0 chr10 37841213 37841471 -107747817 - AluSx SINE Alu -53 259 1 972 176 0 75 chr10 37841592 37841779 -107747509 + AluJo SINE Alu 1 173 -139 469 194 22 72 chr10 37842112 37842251 -107747037 - MIR SINE MIR -72 190 59 197 315 111 74 chr10 37842544 37842590 -107746698 - MIR3 SINE MIR -3 205 162 2016 147 0 16 chr10 37842590 37842903 -107746385 - AluJb SINE Alu -4 308 1 197 315 111 74 chr10 37842903 37843018 -107746270 - MIR3 SINE MIR -46 162 38 2428 109 0 0 chr10 37843436 37843748 -107745540 - AluSx SINE Alu 0 312 1 214 190 224 0 chr10 37843864 37843922 -107745366 - MER5A DNA MER1_type -68 121 51 996 150 0 18 chr10 37843929 37844096 -107745192 - AluJb SINE Alu -13 299 136 2093 104 72 0 chr10 37844713 37844992 -107744296 + AluSx SINE Alu 1 299 -13 22 0 0 0 chr10 37845444 37845466 -107743822 + AT_rich Low_complexity Low_complexity 1 22 0 297 240 8 83 chr10 37846240 37846361 -107742927 + MIR SINE MIR 20 131 -77 23 0 0 0 chr10 37847158 37847181 -107742107 + AT_rich Low_complexity Low_complexity 1 23 0 1984 152 0 3 chr10 37847251 37847547 -107741741 + AluSx SINE Alu 1 295 -17 782 117 0 8 chr10 37847686 37847806 -107741482 - L1PB3 LINE L1 -1 6153 6035 575 196 0 15 chr10 37848067 37848200 -107741088 - L1MB8 LINE L1 -8 6170 6040 23 0 0 0 chr10 37848243 37848266 -107741022 + AT_rich Low_complexity Low_complexity 1 23 0 1729 174 43 0 chr10 37848267 37848548 -107740740 - AluJo SINE Alu -19 293 1 764 203 44 6 chr10 37848548 37848706 -107740582 + MLT1E LTR MaLR 429 592 -1 496 327 6 0 chr10 37848707 37848872 -107740416 + ERVL LTR ERVL 4214 4379 -1385 1165 147 0 0 chr10 37849605 37849775 -107739513 + FRAM SINE Alu 1 170 -6 306 219 27 14 chr10 37849908 37849981 -107739307 + LTR16A LTR ERVL 56 129 -321 316 289 139 12 chr10 37850036 37850202 -107739086 + LTR16A LTR ERVL 246 432 -18 861 265 183 41 chr10 37850418 37850776 -107738512 + L1MC/D LINE L1 3589 3895 -2251 2175 111 46 32 chr10 37850776 37851146 -107738142 + THE1C LTR MaLR 1 375 0 861 265 183 41 chr10 37851146 37851737 -107737551 + L1MC/D LINE L1 3895 4673 -1473 1476 184 44 23 chr10 37851737 37852182 -107737106 + MLT1D LTR MaLR 1 505 0 2105 141 10 0 chr10 37852466 37852771 -107736517 + AluSx SINE Alu 1 308 -4 248 275 88 21 chr10 37852786 37853026 -107736262 + L1MC/D LINE L1 5024 5279 -867 2133 118 3 20 chr10 37853030 37853334 -107735954 - AluSx SINE Alu -13 299 1 2392 46 42 0 chr10 37853353 37853637 -107735651 + AluY SINE Alu 1 296 -15 597 269 134 54 chr10 37853644 37854039 -107735249 + L1MC/D LINE L1 5284 5744 -426 1689 131 24 40 chr10 37854039 37854336 -107734952 + AluSq SINE Alu 21 312 -1 597 269 134 54 chr10 37854336 37854439 -107734849 + L1MC/D LINE L1 5744 5837 -333 1961 143 7 0 chr10 37854549 37854842 -107734446 + AluJo SINE Alu 1 295 -17 441 244 79 107 chr10 37854847 37855138 -107734150 + MLT1J LTR MaLR 229 511 0 884 161 0 7 chr10 37855326 37855463 -107733825 - AluJo SINE Alu -176 136 1 191 22 67 44 chr10 37855665 37855710 -107733578 + A-rich Low_complexity Low_complexity 2 47 0 346 309 34 77 chr10 37856162 37856395 -107732893 + L1M4 LINE L1 3695 3917 -2229 2220 94 3 7 chr10 37856596 37856910 -107732378 - AluSx SINE Alu 0 313 1 492 109 0 0 chr10 37856930 37856994 -107732294 - U6 snRNA snRNA -43 64 1 1765 156 10 49 chr10 37857482 37857623 -107731665 + AluJo SINE Alu 1 146 -166 2107 95 35 0 chr10 37857623 37857906 -107731382 + AluSp SINE Alu 1 293 -20 1765 156 10 49 chr10 37857906 37858072 -107731216 + AluJo SINE Alu 146 296 -16 196 256 154 13 chr10 37858404 37858482 -107730806 + MER5A DNA MER1_type 74 162 -27 2316 138 62 7 chr10 37858490 37858896 -107730392 + MSTC LTR MaLR 1 428 0 2354 89 0 7 chr10 37859008 37859312 -107729976 + AluSx SINE Alu 1 302 -10 709 232 12 24 chr10 37859319 37859487 -107729801 + FRAM SINE Alu 1 162 -14 2301 60 0 3 chr10 37859487 37859807 -107729481 + AluY SINE Alu 1 319 0 7289 163 31 75 chr10 37859809 37860409 -107728879 - LTR49-int LTR ERV1 -1915 4416 3791 1965 151 0 0 chr10 37860409 37860701 -107728587 - AluSx SINE Alu -10 302 11 7289 163 31 75 chr10 37860701 37861333 -107727955 - LTR49-int LTR ERV1 -2540 3791 3133 1536 199 0 7 chr10 37861333 37861615 -107727673 + AluJb SINE Alu 29 308 -4 7289 163 31 75 chr10 37861615 37861900 -107727388 - LTR49-int LTR ERV1 -3198 3133 2978 2503 77 3 0 chr10 37861900 37862211 -107727077 + AluSp SINE Alu 1 312 -1 7289 163 31 75 chr10 37862211 37862381 -107726907 - LTR49-int LTR ERV1 -3353 2978 2802 375 181 69 0 chr10 37862399 37862471 -107726817 - LTR49-int LTR ERV1 -4739 1592 1516 369 274 0 0 chr10 37862475 37862548 -107726740 - tRNA-Glu-GAG tRNA tRNA 0 75 3 1966 152 17 51 chr10 37862548 37862840 -107726448 - LTR49-int LTR ERV1 -3271 1609 1309 2203 107 3 7 chr10 37862840 37863139 -107726149 + AluSx SINE Alu 1 298 -14 1966 152 17 51 chr10 37863139 37863533 -107725755 - LTR49-int LTR ERV1 -3571 1309 575 1211 140 0 0 chr10 37863534 37863712 -107725576 + AluSg/x SINE Alu 131 308 -2 1834 168 54 21 chr10 37863713 37864101 -107725187 - LTR49-int LTR ERV1 -4629 1317 15 3158 139 49 37 chr10 37864117 37864275 -107725013 - LTR49 LTR ERV1 0 595 440 2169 102 17 3 chr10 37864275 37864569 -107724719 - AluSx SINE Alu -12 300 3 3158 139 49 37 chr10 37864569 37864580 -107724708 - LTR49 LTR ERV1 -155 440 431 2494 58 0 10 chr10 37864580 37864874 -107724414 - AluY SINE Alu -20 291 1 3158 139 49 37 chr10 37864874 37865291 -107723997 - LTR49 LTR ERV1 -164 431 1 456 188 21 0 chr10 37865537 37865633 -107723655 - MER53 DNA DNA -90 99 2 22 35 0 0 chr10 37865637 37865666 -107723622 + AT_rich Low_complexity Low_complexity 1 29 0 1447 82 10 5 chr10 37865862 37866058 -107723230 - AluSg/x SINE Alu -4 308 112 2233 77 0 21 chr10 37866080 37866386 -107722902 + AluSc SINE Alu 1 300 0 2352 115 0 0 chr10 37866448 37866760 -107722528 + AluSx SINE Alu 1 312 0 1505 147 98 11 chr10 37866773 37867039 -107722249 + AluJo SINE Alu 1 289 -23 411 149 27 0 chr10 37867186 37867260 -107722028 - AluSx SINE Alu -1 311 236 1510 97 0 5 chr10 37867260 37867455 -107721833 - AluSx SINE Alu -118 194 1 873 197 93 73 chr10 37867630 37867785 -107721503 - AluJo SINE Alu -7 295 130 1636 186 0 47 chr10 37867785 37868107 -107721181 - AluJo SINE Alu -5 307 1 873 197 93 73 chr10 37868107 37868240 -107721048 - AluJo SINE Alu -172 130 1 2021 122 36 10 chr10 37868549 37868673 -107720615 + AluSx SINE Alu 1 120 -192 2439 71 0 7 chr10 37868673 37868970 -107720318 + AluY SINE Alu 1 295 -16 2021 122 36 10 chr10 37868970 37869148 -107720140 + AluSx SINE Alu 120 311 -1 972 189 0 0 chr10 37869187 37869351 -107719937 - FRAM SINE Alu -12 164 1 423 292 33 0 chr10 37869542 37869662 -107719626 + L2 LINE L2 3190 3313 0 2829 173 55 33 chr10 37869691 37869756 -107719532 - L1MB2 LINE L1 -4 6167 6105 1903 171 13 0 chr10 37869756 37870060 -107719228 - AluSx SINE Alu -4 308 1 2829 173 55 33 chr10 37870060 37870634 -107718654 - L1MB2 LINE L1 -66 6105 5514 2220 101 0 16 chr10 37870982 37871289 -107717999 + AluSg SINE Alu 1 302 -8 2271 141 95 0 chr10 37871430 37871820 -107717468 - MSTA LTR MaLR -1 427 1 2362 112 0 0 chr10 37871929 37872241 -107717047 + AluSx SINE Alu 1 312 0 1956 144 30 3 chr10 37872911 37873210 -107716078 + AluJo SINE Alu 1 307 -5 2522 61 0 0 chr10 37873210 37873559 -107715729 + AluY SINE Alu 17 365 0 2250 110 0 16 chr10 37873961 37874279 -107715009 + AluSq SINE Alu 1 313 0 818 208 0 0 chr10 37874302 37874456 -107714832 + AluJb SINE Alu 147 300 -12 1439 180 51 31 chr10 37874547 37874841 -107714447 - AluSx SINE Alu -2 300 1 2048 128 0 42 chr10 37875371 37875512 -107713776 + AluSx SINE Alu 5 150 -162 2525 73 0 0 chr10 37875512 37875815 -107713473 + AluY SINE Alu 1 303 -8 2048 128 0 42 chr10 37875815 37875985 -107713303 + AluSx SINE Alu 150 303 -9 517 319 28 22 chr10 37876033 37876215 -107713073 + MER5A DNA MER1_type 7 189 0 570 78 13 0 chr10 37876559 37876636 -107712652 - U6 snRNA snRNA -1 106 29 679 211 0 0 chr10 37876715 37876838 -107712450 + FLAM_C SINE Alu 2 124 -19 1881 181 0 0 chr10 37877189 37877488 -107711800 - AluJb SINE Alu -13 299 1 458 157 22 11 chr10 37877562 37877651 -107711637 - Cheshire DNA MER1_type -16 2404 2315 * 7293 181 41 31 chr10 37877650 37877883 -107711405 - Cheshire DNA MER1_type -343 2077 1848 2589 55 0 3 chr10 37877883 37878192 -107711096 + AluY SINE Alu 1 308 -3 7293 181 41 31 chr10 37878192 37878859 -107710429 - Cheshire DNA MER1_type -572 1848 1189 1430 175 3 92 chr10 37878859 37879174 -107710114 - AluJo SINE Alu -22 290 4 7293 181 41 31 chr10 37879174 37879474 -107709814 - Cheshire DNA MER1_type -1231 1189 894 2520 60 0 7 chr10 37879474 37879776 -107709512 - AluY SINE Alu -11 300 1 7293 181 41 31 chr10 37879776 37880148 -107709140 - Cheshire DNA MER1_type -1526 894 487 2055 132 19 13 chr10 37880150 37880460 -107708828 + AluJb SINE Alu 1 312 0 7148 155 33 90 chr10 37880470 37880917 -107708371 - L1M4 LINE L1 -3267 3115 2644 1831 127 91 7 chr10 37880917 37881193 -107708095 - AluSx SINE Alu -9 303 5 7148 155 33 90 chr10 37881193 37881208 -107708080 - L1M4 LINE L1 -3738 2644 2630 1851 171 0 0 chr10 37881208 37881494 -107707794 - AluJb SINE Alu -26 286 1 7148 155 33 90 chr10 37881494 37882053 -107707235 - L1M4 LINE L1 -3752 2630 2041 2320 94 7 7 chr10 37882053 37882362 -107706926 + AluSg1 SINE Alu 1 309 0 7148 155 33 90 chr10 37882362 37882909 -107706379 - L1M4 LINE L1 -4341 2041 1711 746 220 0 0 chr10 37882909 37883041 -107706247 - FLAM_A SINE Alu -1 132 1 7148 155 33 90 chr10 37883041 37883685 -107705603 - L1M4 LINE L1 -4671 1711 1032 660 109 0 0 chr10 37883685 37883777 -107705511 + AluSg/x SINE Alu 205 296 -13 3580 177 50 33 chr10 37883781 37884262 -107705026 - L1M4 LINE L1 -5620 764 264 2115 96 20 3 chr10 37884262 37884554 -107704734 + AluSg SINE Alu 5 301 -9 3580 177 50 33 chr10 37884554 37884805 -107704483 - L1M4 LINE L1 -6120 264 19 1104 192 123 0 chr10 37884885 37885088 -107704200 - AluJo SINE Alu -84 228 1 2244 108 0 29 chr10 37885095 37885411 -107703877 - AluSx SINE Alu -5 307 1 215 386 0 11 chr10 37886142 37886230 -107703058 + MER5B DNA MER1_type 6 92 -86 1331 221 42 0 chr10 37886449 37886737 -107702551 + AluJb SINE Alu 12 310 0 1414 170 0 63 chr10 37886744 37886839 -107702449 + AluJo SINE Alu 37 136 -176 2194 111 13 7 chr10 37886839 37887137 -107702151 - AluSx SINE Alu -12 300 1 1414 170 0 63 chr10 37887137 37887312 -107701976 + AluJo SINE Alu 136 290 -22 2216 128 0 0 chr10 37887338 37887644 -107701644 + AluSq SINE Alu 1 306 -7 1572 136 21 0 chr10 37887646 37887882 -107701406 + AluSg/x SINE Alu 65 305 -5 1871 158 0 11 chr10 37887922 37888261 -107701027 - AluSx SINE Alu 0 336 1 226 281 16 0 chr10 37888520 37888535 -107700753 + GA-rich Low_complexity Low_complexity 3 16 -51 1869 135 0 50 chr10 37888535 37888674 -107700614 + AluJo SINE Alu 1 145 -167 2555 68 0 3 chr10 37888674 37888984 -107700304 + AluY SINE Alu 1 309 -2 1869 135 0 50 chr10 37888984 37889170 -107700118 + AluJo SINE Alu 145 312 0 226 281 16 0 chr10 37889170 37889218 -107700070 + GA-rich Low_complexity Low_complexity 16 67 0 4043 84 25 4 chr10 37889277 37889835 -107699453 - L1PA11 LINE L1 -4 6170 5601 956 18 0 0 chr10 37889836 37889947 -107699341 - L1PA4 LINE L1 0 6155 6045 2397 82 27 62 chr10 37889947 37890247 -107699041 - L1PA11 LINE L1 -551 5623 5335 1740 117 101 0 chr10 37890247 37890528 -107698760 - AluSx SINE Alu 0 307 1 2397 82 27 62 chr10 37890528 37890706 -107698582 - L1PA11 LINE L1 -839 5335 5152 2213 103 0 67 chr10 37891668 37891999 -107697289 - AluSx SINE Alu -3 309 1 2267 97 7 3 chr10 37892402 37892700 -107696588 + AluSq SINE Alu 2 300 -13 830 188 12 24 chr10 37892763 37892928 -107696360 + FRAM SINE Alu 3 165 -1 360 106 0 141 chr10 37893490 37893516 -107695772 - LTR43 LTR ERV1 0 602 574 1631 137 129 14 chr10 37893516 37893794 -107695494 - AluSx SINE Alu -2 310 1 360 106 0 141 chr10 37893794 37893832 -107695456 - LTR43 LTR ERV1 -28 574 550 742 171 0 0 chr10 37893832 37893949 -107695339 + FLAM_C SINE Alu 2 118 -15 360 106 0 141 chr10 37893949 37893968 -107695320 - LTR43 LTR ERV1 -52 550 530 2589 256 48 28 chr10 37893968 37894894 -107694394 - MLT-int LTR MaLR -354 1381 385 1972 136 44 3 chr10 37894909 37895204 -107694084 - AluSx SINE Alu -5 307 1 2227 91 0 3 chr10 37895217 37895503 -107693785 - AluSg SINE Alu -1 309 25 1593 187 18 0 chr10 37895511 37895794 -107693494 - MLT-int LTR MaLR -1320 415 128 553 231 13 51 chr10 37895824 37895980 -107693308 - MLT1A1 LTR MaLR -215 150 1 24 32 0 0 chr10 37896123 37896154 -107693134 + AT_rich Low_complexity Low_complexity 1 31 0 2602 71 0 0 chr10 37896314 37896624 -107692664 - AluY SINE Alu -1 310 1 2892 184 25 2 chr10 37896658 37897180 -107692108 + L1MCa LINE L1 28 561 -5865 512 293 111 28 chr10 37897238 37897562 -107691726 + L2 LINE L2 855 1205 -2109 2223 89 25 0 chr10 37897605 37897886 -107691402 - AluSx SINE Alu -24 288 1 5350 95 41 1 chr10 37897890 37898650 -107690638 - L1PA13 LINE L1 0 6163 5374 490 250 40 0 chr10 37898658 37898806 -107690482 + L2 LINE L2 1228 1381 -1933 2152 122 0 10 chr10 37898807 37899103 -107690185 - AluSx SINE Alu -18 294 2 2914 286 120 38 chr10 37899242 37899625 -107689663 - HERV16 LTR ERVL -1905 3091 2741 2373 108 13 35 chr10 37899625 37899997 -107689291 - THE1B LTR MaLR 0 364 1 2914 286 120 38 chr10 37899997 37900656 -107688632 - HERV16 LTR ERVL -2255 2741 2137 2311 113 0 7 chr10 37900656 37900965 -107688323 - AluSx SINE Alu -5 307 1 2914 286 120 38 chr10 37900965 37901081 -107688207 - HERV16 LTR ERVL -2859 2137 2032 2508 65 0 0 chr10 37901081 37901374 -107687914 + AluY SINE Alu 1 293 -18 2914 286 120 38 chr10 37901374 37901777 -107687511 - HERV16 LTR ERVL -2964 2032 1687 500 325 65 68 chr10 37901774 37901977 -107687311 - HERV16 LTR ERVL -3428 1568 1366 * 2029 156 0 0 chr10 37901977 37902284 -107687004 - AluJo SINE Alu -4 308 2 500 325 65 68 chr10 37902284 37902495 -107686793 - HERV16 LTR ERVL -3630 1366 1155 1287 288 69 46 chr10 37902505 37903159 -107686129 - HERV16 LTR ERVL -3956 1040 372 370 290 14 10 chr10 37904159 37904283 -107685005 - LTR16A LTR ERVL -72 385 250 230 289 77 10 chr10 37904486 37904590 -107684698 + L2 LINE L2 1597 1707 -1607 364 263 35 88 chr10 37904650 37904710 -107684578 - MER76 LTR ERV -43 645 583 2230 129 7 0 chr10 37904710 37905013 -107684275 - AluSx SINE Alu -7 305 1 364 263 35 88 chr10 37905013 37905123 -107684165 - MER76 LTR ERV -105 583 484 1617 199 80 3 chr10 37905152 37905479 -107683809 - MER76 LTR ERV -334 354 3 553 289 28 0 chr10 37905481 37905661 -107683627 + L2 LINE L2 1729 1913 -1401 1366 138 0 0 chr10 37905727 37905916 -107683372 + AluSg/x SINE Alu 82 270 -40 1100 123 0 6 chr10 37905930 37906109 -107683179 + (GGAA)n Simple_repeat Simple_repeat 3 180 0 2689 183 47 39 chr10 37906109 37906879 -107682409 + L1MB8 LINE L1 4893 5655 -529 257 0 30 0 chr10 37906879 37906912 -107682376 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 2028 111 0 21 chr10 37906914 37907202 -107682086 - AluSg SINE Alu -28 282 1 2689 183 47 39 chr10 37907202 37907511 -107681777 + L1MB8 LINE L1 5655 6175 -9 521 273 75 0 chr10 37907521 37907708 -107681580 + L2 LINE L2 1902 2102 -1212 1871 151 3 29 chr10 37907714 37908026 -107681262 - AluJo SINE Alu -8 304 1 2247 102 20 3 chr10 37908045 37908350 -107680938 + AluSg SINE Alu 1 310 0 2184 104 0 10 chr10 37909003 37909302 -107679986 - AluY SINE Alu -15 296 1 2128 126 7 0 chr10 37909401 37909711 -107679577 + AluSx SINE Alu 1 312 0 235 302 0 0 chr10 37909717 37909780 -107679508 - L1ME3 LINE L1 -4 6158 6096 180 348 76 0 chr10 37909780 37909872 -107679416 + L2 LINE L2 2088 2186 -1128 353 235 35 35 chr10 37909879 37909994 -107679294 - L1ME1 LINE L1 -65 6101 5987 1956 228 56 17 chr10 37910012 37910604 -107678684 - L1MDa LINE L1 -2780 3760 3146 1845 130 0 63 chr10 37910608 37910924 -107678364 - AluSx SINE Alu -5 307 12 689 190 38 143 chr10 37910925 37911040 -107678248 - L1MDa LINE L1 -3861 2679 2554 1333 141 82 107 chr10 37911040 37911331 -107677957 - AluJo SINE Alu -28 284 1 689 190 38 143 chr10 37911331 37911408 -107677880 - L1MDa LINE L1 -3986 2554 2471 2266 116 3 0 chr10 37911408 37911711 -107677577 - AluSp SINE Alu -9 304 1 689 190 38 143 chr10 37911711 37911959 -107677329 - L1MDa LINE L1 -4069 2471 2287 2159 109 10 0 chr10 37911962 37912255 -107677033 - AluSx SINE Alu -16 296 1 1989 144 0 7 chr10 37912255 37912547 -107676741 - AluSx SINE Alu -10 302 13 25 0 0 0 chr10 37912867 37912892 -107676396 + AT_rich Low_complexity Low_complexity 1 25 0 1991 220 98 87 chr10 37912945 37913415 -107675873 - L1ME1 LINE L1 -17 6149 5686 763 104 0 0 chr10 37913415 37913521 -107675767 - AluSq/x SINE Alu -173 140 35 1991 220 98 87 chr10 37913521 37915166 -107674122 - L1ME1 LINE L1 -480 5686 3959 2128 128 0 16 chr10 37915191 37915497 -107673791 + AluSx SINE Alu 1 301 -11 1997 122 0 7 chr10 37915543 37915822 -107673466 + AluSg SINE Alu 1 277 -33 378 0 0 0 chr10 37915822 37915864 -107673424 + (CA)n Simple_repeat Simple_repeat 1 42 0 1162 140 6 0 chr10 37915864 37916028 -107673260 + AluSg/x SINE Alu 131 295 -17 299 179 113 0 chr10 37916028 37916134 -107673154 - L1ME1 LINE L1 -2197 3949 3832 581 165 50 0 chr10 37916144 37916265 -107673023 - L1MB7 LINE L1 0 6253 6127 842 150 0 8 chr10 37916280 37916407 -107672881 + FLAM_C SINE Alu 2 127 -16 214 182 0 0 chr10 37916409 37916453 -107672835 + A-rich Low_complexity Low_complexity 5 48 0 7701 208 40 24 chr10 37916458 37916610 -107672678 - L1MB7 LINE L1 -134 6119 5971 2131 123 10 3 chr10 37916610 37916903 -107672385 - AluSq SINE Alu -18 295 1 7701 208 40 24 chr10 37916903 37917128 -107672160 - L1MB7 LINE L1 -282 5971 5751 2307 88 3 20 chr10 37917128 37917434 -107671854 - AluSg SINE Alu -9 301 1 7701 208 40 24 chr10 37917434 37917945 -107671343 - L1MB7 LINE L1 -502 5751 5250 2180 101 9 19 chr10 37917945 37918261 -107671027 - AluSq SINE Alu 0 313 1 7701 208 40 24 chr10 37918261 37918375 -107670913 - L1MB7 LINE L1 -1003 5250 5139 2259 112 20 0 chr10 37918375 37918679 -107670609 - AluSq SINE Alu -3 310 1 7701 208 40 24 chr10 37918679 37919388 -107669900 - L1MB7 LINE L1 -1114 5139 4443 2213 113 3 7 chr10 37919388 37919688 -107669600 - AluSx SINE Alu -12 300 2 7701 208 40 24 chr10 37919688 37920619 -107668669 - L1MB7 LINE L1 -1810 4443 3436 963 136 14 0 chr10 37920628 37920775 -107668513 + AluJb SINE Alu 157 305 -7 2416 76 3 3 chr10 37920830 37921131 -107668157 - AluSp SINE Alu -12 301 1 613 186 186 0 chr10 37921131 37921298 -107667990 - L1MB3 LINE L1 -133 6050 5853 1109 160 7 28 chr10 37921300 37921540 -107667748 - L1MB4 LINE L1 -267 5913 5708 * 9783 162 30 34 chr10 37921509 37921901 -107667387 + L1P LINE L1 2872 3264 -2882 1916 159 0 3 chr10 37921901 37922209 -107667079 + AluSx SINE Alu 5 311 -1 9783 162 30 34 chr10 37922209 37923766 -107665522 + L1P LINE L1 3264 4813 -1333 258 267 13 0 chr10 37923767 37923842 -107665446 - L1ME1 LINE L1 -5 6161 6086 225 88 0 0 chr10 37923857 37923891 -107665397 - MER3 DNA MER1_type -160 49 16 1512 208 80 54 chr10 37923891 37924111 -107665177 - L1ME1 LINE L1 -143 6023 5810 1682 168 3 48 chr10 37924111 37924421 -107664867 - AluJo SINE Alu -16 296 1 1512 208 80 54 chr10 37924421 37924699 -107664589 - L1ME1 LINE L1 -356 5810 5512 * 2309 263 57 8 chr10 37924696 37925630 -107663658 - L1MB7 LINE L1 -3316 2899 1962 915 282 61 55 chr10 37925673 37926163 -107663125 - L1MEc LINE L1 -5881 515 23 2300 96 0 10 chr10 37926416 37926707 -107662581 - AluSq SINE Alu -25 288 1 216 234 21 0 chr10 37926756 37926803 -107662485 - MIR SINE MIR -201 61 14 1907 132 13 23 chr10 37927228 37927532 -107661756 - AluJb SINE Alu -11 301 1 254 0 26 26 chr10 37927539 37927577 -107661711 + (TTTA)n Simple_repeat Simple_repeat 2 68 0 2166 90 4 7 chr10 37927577 37927856 -107661432 - AluSc SINE Alu -1 319 5 2389 93 0 0 chr10 37927910 37928210 -107661078 - AluSx SINE Alu -12 300 1 1697 137 48 22 chr10 37928513 37928784 -107660504 + AluJo SINE Alu 1 278 -34 2223 87 4 0 chr10 37928784 37929060 -107660228 - AluSp SINE Alu -17 296 20 353 85 0 34 chr10 37929086 37929097 -107660191 + (GGAA)n Simple_repeat Simple_repeat 4 14 -46 2511 76 3 0 chr10 37929097 37929400 -107659888 + AluSp SINE Alu 3 306 -7 353 85 0 34 chr10 37929400 37929447 -107659841 + (GGAA)n Simple_repeat Simple_repeat 14 60 0 2848 13 0 3 chr10 37929897 37930209 -107659079 - AluYa5 SINE Alu 0 311 1 1028 127 153 0 chr10 37930251 37930440 -107658848 - MER20 DNA MER1_type 0 219 2 2291 117 0 0 chr10 37931636 37931934 -107657354 - AluSx SINE Alu -14 298 1 216 226 48 24 chr10 37932256 37932340 -107656948 + CT-rich Low_complexity Low_complexity 3 88 0 333 333 91 16 chr10 37932668 37932854 -107656434 + MIR SINE MIR 62 261 -1 207 194 0 0 chr10 37933260 37933296 -107655992 + (TATATG)n Simple_repeat Simple_repeat 1 36 0 236 291 0 0 chr10 37933296 37933375 -107655913 - L1MC4 LINE L1 -1340 6702 6624 228 211 0 89 chr10 37933301 37933391 -107655897 + L1MC4 LINE L1 6614 6695 -1347 * 2314 94 3 0 chr10 37933418 37933716 -107655572 - AluSx SINE Alu -13 299 1 193 304 51 11 chr10 37933728 37933815 -107655473 - MIR SINE MIR -66 142 53 1726 164 7 18 chr10 37933866 37934147 -107655141 + AluJo SINE Alu 1 278 -34 189 343 122 14 chr10 37934448 37934734 -107654554 - L2 LINE L2 -785 2529 2213 1900 161 13 0 chr10 37935022 37935320 -107653968 - AluJo SINE Alu -10 302 1 300 106 0 0 chr10 37935343 37935390 -107653898 - L1MA4A LINE L1 -5 6298 6252 222 37 0 0 chr10 37935390 37935417 -107653871 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 2255 85 0 3 chr10 37935417 37935699 -107653589 - AluY SINE Alu -30 281 1 3463 137 48 5 chr10 37935699 37936299 -107652989 - L1MA4 LINE L1 -320 5980 5355 265 232 29 0 chr10 37936388 37936457 -107652831 - Charlie7 DNA MER1_type -1923 689 619 864 121 0 0 chr10 37936458 37936574 -107652714 + AluJb SINE Alu 1 116 -196 450 0 0 0 chr10 37936574 37936624 -107652664 + (CAAAA)n Simple_repeat Simple_repeat 4 53 0 1897 144 0 23 chr10 37936635 37936940 -107652348 + AluJo SINE Alu 6 303 -9 1875 156 0 3 chr10 37936994 37937277 -107652011 + AluJo SINE Alu 1 282 -30 1821 183 0 0 chr10 37937303 37937592 -107651696 + AluJo SINE Alu 1 289 -23 2399 89 0 13 chr10 37937695 37938008 -107651280 + AluY SINE Alu 1 309 -2 838 212 6 0 chr10 37938349 37938514 -107650774 - FRAM SINE Alu 0 166 1 258 291 19 39 chr10 37938602 37938705 -107650583 + MIR SINE MIR 30 130 -78 2001 158 0 10 chr10 37939290 37939600 -107649688 + AluJb SINE Alu 1 307 -5 240 193 217 0 chr10 37939642 37939725 -107649563 - L1ME4a LINE L1 0 6121 6021 2088 124 45 28 chr10 37939785 37940141 -107649147 - THE1B LTR MaLR -2 362 1 28 0 0 0 chr10 37940145 37940173 -107649115 + AT_rich Low_complexity Low_complexity 1 28 0 27 39 0 19 chr10 37940380 37940401 -107648887 + AT_rich Low_complexity Low_complexity 1 21 -30 2335 66 7 0 chr10 37940401 37940688 -107648600 + AluSp SINE Alu 2 290 -23 27 39 0 19 chr10 37940688 37940718 -107648570 + AT_rich Low_complexity Low_complexity 21 51 0 4709 113 26 9 chr10 37940719 37941419 -107647869 - L1PA13 LINE L1 -19 6144 5433 521 223 241 36 chr10 37941419 37941774 -107647514 - L1MB3 LINE L1 -38 6143 5740 2168 103 0 3 chr10 37942464 37942746 -107646542 - AluSx SINE Alu -31 281 1 844 169 0 0 chr10 37942763 37942887 -107646401 - FLAM_C SINE Alu -16 127 4 307 277 64 0 chr10 37942889 37942983 -107646305 - L2 LINE L2 -8 3305 3206 1830 154 7 0 chr10 37943546 37943857 -107645431 + AluJo SINE Alu 1 313 0 215 279 12 12 chr10 37944354 37944440 -107644848 + (TAAAG)n Simple_repeat Simple_repeat 2 87 0 195 42 0 0 chr10 37944454 37944478 -107644810 + (TCCCC)n Simple_repeat Simple_repeat 5 28 0 242 182 0 0 chr10 37944523 37944567 -107644721 - L1M4 LINE L1 -2658 3488 3445 1214 186 43 9 chr10 37944569 37944800 -107644488 - AluJo SINE Alu -19 293 55 723 229 17 40 chr10 37944833 37945033 -107644255 + FRAM SINE Alu 1 176 0 273 303 110 0 chr10 37945035 37945190 -107644098 + L1ME1 LINE L1 3280 3451 -2695 1093 84 0 0 chr10 37945193 37945324 -107643964 + AluSg SINE Alu 1 131 -179 1676 124 0 4 chr10 37945336 37945570 -107643718 + AluSg/x SINE Alu 71 303 -9 5297 205 72 53 chr10 37945570 37946459 -107642829 + L1ME1 LINE L1 3461 4331 -1835 1678 154 95 0 chr10 37946459 37946732 -107642556 + AluJo SINE Alu 1 299 -13 5297 205 72 53 chr10 37946732 37946994 -107642294 + L1ME1 LINE L1 4331 4586 -1580 1872 159 3 20 chr10 37946994 37947290 -107641998 + AluJb SINE Alu 5 295 -17 5297 205 72 53 chr10 37947290 37947677 -107641611 + L1ME1 LINE L1 4586 4964 -1202 2031 117 10 14 chr10 37947677 37947968 -107641320 + AluSc SINE Alu 5 294 -15 5297 205 72 53 chr10 37947968 37948529 -107640759 + L1ME1 LINE L1 4964 5513 -653 2142 114 3 10 chr10 37948529 37948828 -107640460 - AluSx SINE Alu -15 297 1 5297 205 72 53 chr10 37948828 37949336 -107639952 + L1ME1 LINE L1 5513 6112 -54 2086 128 7 3 chr10 37949336 37949632 -107639656 + AluSx SINE Alu 1 297 -15 2252 98 3 0 chr10 37950781 37951067 -107638221 - AluSx SINE Alu -15 297 11 2067 97 45 10 chr10 37951079 37951369 -107637919 - AluSp SINE Alu -13 300 1 1784 169 20 10 chr10 37951396 37951692 -107637596 + AluJo SINE Alu 1 299 -13 235 214 107 0 chr10 37951693 37951749 -107637539 - L1ME1 LINE L1 -5 6161 6100 421 98 16 0 chr10 37951749 37951810 -107637478 - Alu SINE Alu -13 299 238 1537 163 56 11 chr10 37952216 37952486 -107636802 + AluJo SINE Alu 1 282 -30 225 0 0 0 chr10 37952489 37952514 -107636774 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 355 253 102 16 chr10 37952850 37953036 -107636252 - L1MC4a LINE L1 -1896 5912 5711 381 269 56 56 chr10 37954706 37954866 -107634422 + L1ME4a LINE L1 5544 5703 -418 1064 92 0 0 chr10 37954869 37954999 -107634289 + AluY SINE Alu 1 130 -181 366 237 83 26 chr10 37955013 37955169 -107634119 + L1ME4a LINE L1 5698 5862 -259 209 326 54 0 chr10 37955423 37955515 -107633773 - L2 LINE L2 -537 2777 2681 315 259 123 57 chr10 37956147 37956351 -107632937 - MLT1J LTR MaLR -11 500 206 2151 104 3 16 chr10 37956351 37956658 -107632630 - AluSx SINE Alu -9 303 1 315 259 123 57 chr10 37956658 37956733 -107632555 - MLT1J LTR MaLR -305 206 137 194 338 100 25 chr10 37957507 37957587 -107631701 + L2 LINE L2 3139 3224 -48 2410 80 0 0 chr10 37958214 37958503 -107630785 - AluY SINE Alu -22 289 1 693 144 0 18 chr10 37958639 37958750 -107630538 - FRAM SINE Alu -15 161 53 256 148 37 19 chr10 37960555 37960609 -107628679 + MIR3 SINE MIR 103 157 -51 198 0 0 0 chr10 37960928 37960950 -107628338 + (CAAAG)n Simple_repeat Simple_repeat 2 23 0 591 180 49 16 chr10 37961174 37961296 -107627992 + AluJ SINE Alu 1 126 -186 353 140 9 140 chr10 37961349 37961456 -107627832 + AluYa5 SINE Alu 87 179 -122 252 0 9 0 chr10 37961456 37961527 -107627761 + (CA)n Simple_repeat Simple_repeat 2 29 0 1147 131 0 22 chr10 37961528 37961711 -107627577 + AluJ SINE Alu 134 312 0 229 178 27 27 chr10 37962027 37962100 -107627188 + G-rich Low_complexity Low_complexity 4 76 0 24 77 0 0 chr10 37962297 37962349 -107626939 + GC_rich Low_complexity Low_complexity 1 52 0 236 143 18 0 chr10 37962441 37962497 -107626791 + (CCG)n Simple_repeat Simple_repeat 3 59 0 200 161 18 36 chr10 37962550 37962606 -107626682 + C-rich Low_complexity Low_complexity 1 55 0 198 315 14 0 chr10 37963947 37964020 -107625268 + MIR SINE MIR 183 256 -6 241 295 32 11 chr10 37964824 37964919 -107624369 + MER5B DNA MER1_type 82 178 0 206 266 0 16 chr10 37965021 37965085 -107624203 + (TA)n Simple_repeat Simple_repeat 1 63 0 465 285 66 0 chr10 37965646 37965797 -107623491 - MIR SINE MIR -36 226 66 792 263 152 42 chr10 37966085 37966101 -107623187 + L2 LINE L2 2409 2422 -891 2277 113 3 0 chr10 37966101 37966403 -107622885 - AluSx SINE Alu -9 303 1 792 263 152 42 chr10 37966403 37967196 -107622092 + L2 LINE L2 2422 3309 -4 309 261 11 11 chr10 37968137 37968225 -107621063 - MIR3 SINE MIR -39 169 82 338 271 34 8 chr10 37968316 37968434 -107620854 - MIR SINE MIR -108 154 34 2136 104 52 3 chr10 37968600 37968888 -107620400 - AluSx SINE Alu -10 302 1 2360 108 0 0 chr10 37968982 37969289 -107619999 - AluSq SINE Alu -6 307 1 1932 94 27 106 chr10 37970009 37970168 -107619120 + AluYb8 SINE Alu 1 122 -196 6353 28 1 8 chr10 37970168 37970912 -107618376 - L1PA4 LINE L1 0 6155 5417 1932 94 27 106 chr10 37970912 37971083 -107618205 + AluYb8 SINE Alu 122 305 -13 1883 120 22 4 chr10 37972242 37972516 -107616772 - AluJo SINE Alu -23 289 11 221 0 0 33 chr10 37972548 37972578 -107616710 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 335 254 36 27 chr10 37972582 37972692 -107616596 - MARNA DNA Mariner -381 205 95 1154 190 49 9 chr10 37974561 37974787 -107614501 - MER8 DNA MER2_type -4 235 1 542 185 136 82 chr10 37975260 37975444 -107613844 - MER20 DNA MER1_type 0 219 26 21 57 0 0 chr10 37977269 37977304 -107611984 + AT_rich Low_complexity Low_complexity 1 35 0 191 362 78 7 chr10 37978203 37978344 -107610944 - L2 LINE L2 -42 3230 3080 1940 166 0 3 chr10 37978518 37978820 -107610468 - AluJb SINE Alu -5 307 7 1363 204 123 110 chr10 37979407 37979784 -107609504 - MLT1F1 LTR MaLR 0 567 154 2216 117 3 0 chr10 37979784 37980084 -107609204 - AluSx SINE Alu -11 301 1 1363 204 123 110 chr10 37980084 37980241 -107609047 - MLT1F1 LTR MaLR -413 154 1 2316 113 0 3 chr10 37980995 37981306 -107607982 + AluSx SINE Alu 2 311 -1 21 0 0 0 chr10 37981336 37981357 -107607931 + AT_rich Low_complexity Low_complexity 1 21 0 485 312 139 20 chr10 37982437 37982761 -107606527 + L2 LINE L2 2715 2999 -314 351 89 0 0 chr10 37982761 37982817 -107606471 + (CCCCAG)n Simple_repeat Simple_repeat 4 59 0 485 312 139 20 chr10 37982817 37983015 -107606273 + L2 LINE L2 2999 3309 -4 2200 173 199 22 chr10 37983061 37983655 -107605633 - L1MC4 LINE L1 -458 7584 6886 21 0 0 0 chr10 37983815 37983836 -107605452 + AT_rich Low_complexity Low_complexity 1 21 0 1790 228 87 27 chr10 37984193 37984720 -107604568 - REP3 LTR ERV 0 562 4 2920 146 42 43 chr10 37985047 37985091 -107604197 - L1MB3 LINE L1 -9 6174 6131 207 0 0 0 chr10 37985091 37985114 -107604174 + (TTA)n Simple_repeat Simple_repeat 2 24 0 725 189 0 0 chr10 37985114 37985236 -107604052 - FLAM_C SINE Alu -7 126 5 2920 146 42 43 chr10 37985236 37985744 -107603544 - L1MB3 LINE L1 -50 6133 5622 1943 166 16 0 chr10 37985874 37986181 -107603107 - AluJo SINE Alu 0 312 1 23 54 0 0 chr10 37986293 37986330 -107602958 + AT_rich Low_complexity Low_complexity 1 37 0 2207 110 7 0 chr10 37986464 37986756 -107602532 - AluSg SINE Alu -16 294 1 309 314 105 14 chr10 37986789 37986999 -107602289 - L1ME4a LINE L1 -129 5992 5764 451 127 0 0 chr10 37987401 37987464 -107601824 + MER46B DNA MER2_type 3 65 -296 1570 129 95 24 chr10 37987499 37987794 -107601494 + MER46B DNA MER2_type 45 235 -1 1665 174 37 38 chr10 37988320 37989084 -107600204 - SVA Other Other -518 868 388 790 168 51 30 chr10 37991253 37991450 -107597838 + L1MD3 LINE L1 7779 7979 -16 1220 170 15 0 chr10 37992303 37992509 -107596779 + MER3 DNA MER1_type 1 209 0 239 284 147 0 chr10 37992730 37992832 -107596456 - L1ME LINE L1 -219 5902 5786 417 222 210 18 chr10 37992909 37993076 -107596212 + MIR SINE MIR 64 262 0 194 326 65 11 chr10 37993772 37993864 -107595424 + MIR SINE MIR 33 129 -79 192 77 0 0 chr10 37995701 37995727 -107593561 + (CATATA)n Simple_repeat Simple_repeat 1 26 0 2524 57 0 0 chr10 37995754 37996050 -107593238 - AluY SINE Alu -15 296 1 2393 87 0 0 chr10 37996314 37996614 -107592674 - AluY SINE Alu -11 300 1 187 323 73 10 chr10 37996713 37996809 -107592479 + L2 LINE L2 3139 3240 -32 2255 102 7 0 chr10 37998304 37998597 -107590691 - AluSq SINE Alu -18 295 1 421 309 59 15 chr10 37998732 37998936 -107590352 + MIR SINE MIR 36 248 -14 2119 159 50 10 chr10 37999133 37999517 -107589771 + Tigger2a DNA MER2_type 36 434 0 26 0 0 0 chr10 37999863 37999889 -107589399 + AT_rich Low_complexity Low_complexity 1 26 0 1842 193 55 38 chr10 38000695 38001147 -107588141 - MLT1D LTR MaLR 0 505 46 3002 171 112 22 chr10 38001740 38001793 -107587495 - Charlie1 DNA MER1_type 0 2761 2714 3626 149 22 11 chr10 38001793 38002065 -107587223 + L1MB7 LINE L1 5518 5786 -398 1475 157 8 8 chr10 38002065 38002301 -107586987 + MER46A DNA MER2_type 1 236 0 3626 149 22 11 chr10 38002301 38002621 -107586667 + L1MB7 LINE L1 5786 6120 -64 3575 140 43 12 chr10 38002621 38003205 -107586083 + MER7C DNA MER2_type 1 602 0 3626 149 22 11 chr10 38003205 38003254 -107586034 + L1MB7 LINE L1 6120 6167 -17 3002 171 112 22 chr10 38003254 38003956 -107585332 - Charlie1 DNA MER1_type -47 2714 1938 222 374 15 33 chr10 38004296 38004491 -107584797 - MIR SINE MIR -51 211 25 1620 175 59 27 chr10 38004649 38005054 -107584234 - LTR52 LTR ERVL -3 418 1 234 233 55 27 chr10 38006104 38006177 -107583111 - L1MC5 LINE L1 -50 7911 7837 369 265 15 23 chr10 38006212 38006344 -107582944 - MIR SINE MIR -51 211 81 2701 209 127 27 chr10 38006589 38006877 -107582411 + MER97a DNA MER1_type 1 259 -635 2333 94 0 19 chr10 38006877 38007186 -107582102 + AluSx SINE Alu 1 303 -9 2701 209 127 27 chr10 38007186 38007710 -107581578 + MER97a DNA MER1_type 259 894 0 815 185 57 38 chr10 38008084 38008295 -107580993 + MER20 DNA MER1_type 1 215 -4 382 244 23 38 chr10 38008295 38008426 -107580862 + MIR SINE MIR 86 214 -48 831 270 39 13 chr10 38008572 38008805 -107580483 - MER8 DNA MER2_type 0 239 1 2342 108 3 0 chr10 38008902 38009207 -107580081 - AluSq SINE Alu -7 306 1 241 198 77 33 chr10 38009433 38009524 -107579764 + MER103 DNA DNA 11 105 -61 22 0 0 0 chr10 38009552 38009574 -107579714 + AT_rich Low_complexity Low_complexity 1 22 0 3053 108 19 13 chr10 38009730 38010192 -107579096 - MER4C LTR ERV1 0 465 1 413 188 148 16 chr10 38011021 38011149 -107578139 + MER97a DNA MER1_type? 545 689 -205 439 226 11 21 chr10 38011153 38011246 -107578042 - L1ME LINE L1 -585 5579 5488 1912 212 56 25 chr10 38014257 38014742 -107574546 - MLT1D LTR MaLR 0 505 6 222 118 0 0 chr10 38014822 38014856 -107574432 + (CTA)n Simple_repeat Simple_repeat 2 35 0 211 253 84 21 chr10 38014878 38014973 -107574315 + L2 LINE L2 3162 3262 -10 2203 114 7 0 chr10 38015039 38015336 -107573952 - AluSg SINE Alu -11 299 1 22 0 0 0 chr10 38016400 38016422 -107572866 + AT_rich Low_complexity Low_complexity 1 22 0 205 155 0 155 chr10 38016583 38016641 -107572647 + MIR SINE MIR 56 104 -158 3190 113 18 68 chr10 38016665 38017238 -107572050 - LTR10A LTR ERV1 -65 544 1 248 312 43 0 chr10 38017250 38017343 -107571945 + MIR SINE MIR 120 216 -46 221 325 0 12 chr10 38017390 38017473 -107571815 + CT-rich Low_complexity Low_complexity 3 84 0 229 193 18 0 chr10 38017660 38017717 -107571571 - L1ME4a LINE L1 -9 6112 6055 222 311 77 68 chr10 38017929 38018164 -107571124 - L2 LINE L2 -44 3228 2992 1005 211 55 7 chr10 38018433 38018814 -107570474 + MER31B LTR ERV1 1 466 0 674 124 124 0 chr10 38019404 38019517 -107569771 + FLAM_A SINE Alu 4 130 -3 1299 177 23 110 chr10 38020853 38021345 -107567943 - MER31A LTR ERV1 0 466 1 236 323 71 8 chr10 38021628 38021755 -107567533 + L2 LINE L2 3137 3271 -1 830 164 0 22 chr10 38073802 38073936 -107515352 - FLAM_C SINE Alu -1 132 2 2021 191 81 37 chr10 38074430 38074922 -107514366 - MER68 LTR ERV1 -48 514 1 247 360 35 0 chr10 38075989 38076075 -107513213 - L2 LINE L2 -1 3271 3183 693 254 122 5 chr10 38076129 38076342 -107512946 + MIR SINE MIR 23 260 -2 1111 269 290 17 chr10 38076387 38078082 -107511206 - L2 LINE L2 -280 3033 836 197 308 207 12 chr10 38078171 38078340 -107510948 - L2 LINE L2 -2997 317 116 200 225 0 11 chr10 38078636 38078725 -107510563 + CT-rich Low_complexity Low_complexity 1 88 0 474 348 3 0 chr10 38078876 38079094 -107510194 + CT-rich Low_complexity Low_complexity 1 218 0 181 194 16 16 chr10 38079134 38079196 -107510092 + (TCTG)n Simple_repeat Simple_repeat 2 63 0 222 236 0 42 chr10 38079196 38079268 -107510020 + CT-rich Low_complexity Low_complexity 3 71 0 561 252 98 138 chr10 38079423 38080384 -107508904 + L1MEd LINE L1 12 926 -5193 2116 182 3 11 chr10 38080384 38080746 -107508542 + MLT1A1 LTR MaLR 3 361 -4 561 252 98 138 chr10 38080746 38080867 -107508421 + L1MEd LINE L1 926 1050 -5069 547 280 151 11 chr10 38080920 38081191 -107508097 + L1M4 LINE L1 3931 4239 -1907 200 280 43 75 chr10 38081649 38081742 -107507546 - L2 LINE L2 -31 3241 3152 959 159 0 0 chr10 38081820 38081971 -107507317 + FRAM SINE Alu 1 146 -30 243 0 0 0 chr10 38082873 38082900 -107506388 + (CTCA)n Simple_repeat Simple_repeat 1 27 0 323 167 0 94 chr10 38083491 38083587 -107505701 - L1ME4a LINE L1 -2 6119 6033 1162 161 45 36 chr10 38083648 38083872 -107505416 - MER46A DNA MER2_type -10 226 1 865 135 7 50 chr10 38084517 38084658 -107504630 - AluJo SINE Alu -177 135 1 350 312 64 50 chr10 38084940 38085158 -107504130 - MIR SINE MIR -11 251 31 487 255 67 27 chr10 38086267 38086416 -107502872 - MER104 DNA Tc2 -21 159 5 2360 70 27 3 chr10 38086871 38087171 -107502117 + AluY SINE Alu 1 307 -4 392 127 14 14 chr10 38088364 38088435 -107500853 + Charlie2a DNA MER1_type 1467 1537 -1325 272 154 19 0 chr10 38088491 38088543 -107500745 + Charlie2a DNA MER1_type 1523 1575 -1287 21 0 0 0 chr10 38089898 38089919 -107499369 + AT_rich Low_complexity Low_complexity 1 21 0 286 311 179 10 chr10 38091163 38091359 -107497929 - MIR SINE MIR -6 256 28 2508 164 55 2 chr10 38092855 38093312 -107495976 + MER31A LTR ERV1 5 485 0 224 286 52 13 chr10 38093918 38093995 -107495293 - MIR SINE MIR -15 247 168 499 69 0 28 chr10 38094021 38094093 -107495195 - MER30 DNA MER1_type -160 70 1 214 246 0 0 chr10 38094296 38094353 -107494935 - MIR SINE MIR -141 121 65 1496 118 41 0 chr10 38095001 38095221 -107494067 + MER30 DNA MER1_type 2 230 0 312 214 36 62 chr10 38095854 38095966 -107493322 + L2 LINE L2 3150 3258 -55 2334 82 10 10 chr10 38096636 38096930 -107492358 + AluY SINE Alu 1 294 -17 961 173 0 62 chr10 38098531 38098710 -107490578 + FRAM SINE Alu 1 167 -9 230 262 78 10 chr10 38098936 38099066 -107490222 - MIR SINE MIR -76 132 6 351 280 106 18 chr10 38100474 38100692 -107488596 - MER112 DNA MER1_type -7 253 17 395 249 76 83 chr10 38101000 38101277 -107488011 + L1ME4a LINE L1 5635 5909 -212 1210 191 158 0 chr10 38101284 38101530 -107487758 + AluJo SINE Alu 8 292 -20 195 100 0 0 chr10 38101713 38101743 -107487545 + (T)n Simple_repeat Simple_repeat 1 30 0 353 315 67 17 chr10 38105002 38105180 -107484108 - MIR SINE MIR -2 260 74 306 238 20 82 chr10 38105346 38105493 -107483795 + L2 LINE L2 3163 3300 -13 231 36 0 0 chr10 38105493 38105521 -107483767 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 42882 34 30 2 chr10 38106678 38112666 -107476622 + L1PA3 LINE L1 1 6155 0 1909 156 3 7 chr10 38113578 38113866 -107475422 + AluJo SINE Alu 1 287 -25 657 286 89 19 chr10 38115324 38115524 -107473764 - MER102b DNA MER1_type -1091 337 106 470 17 17 0 chr10 38115524 38115583 -107473705 + (TG)n Simple_repeat Simple_repeat 2 61 0 657 286 89 19 chr10 38115583 38115697 -107473591 - MER102b DNA MER1_type -1322 106 1 425 38 0 0 chr10 38117274 38117327 -107471961 - MADE1 DNA Mariner 0 80 28 195 276 37 52 chr10 38117744 38117878 -107471410 + L2 LINE L2 1545 1676 -1638 22 56 0 0 chr10 38118171 38118207 -107471081 + AT_rich Low_complexity Low_complexity 1 36 0 2679 58 0 0 chr10 38118217 38118526 -107470762 + AluY SINE Alu 1 309 -2 212 333 10 29 chr10 38118778 38118880 -107470408 + L2 LINE L2 2260 2359 -955 822 200 60 0 chr10 38118997 38119147 -107470141 - MER63 DNA MER1_type -277 785 1 260 370 20 0 chr10 38119195 38119295 -107469993 + L2 LINE L2 2542 2643 -671 850 243 90 23 chr10 38121299 38121599 -107467689 - Charlie2 DNA MER1_type 0 2862 2543 2133 120 82 15 chr10 38121739 38122080 -107467208 - THE1B LTR MaLR 0 364 1 452 245 127 42 chr10 38126196 38126408 -107462880 - MIR SINE MIR 0 262 33 2041 132 0 0 chr10 38127210 38127525 -107461763 - AluSx SINE Alu 0 315 1 274 307 94 16 chr10 38128120 38128247 -107461041 + MIR SINE MIR 28 164 -98 2336 262 51 26 chr10 38128390 38129160 -107460128 - L1MC4 LINE L1 -553 7489 6701 1857 149 98 0 chr10 38129276 38129624 -107459664 - L1MB7 LINE L1 0 6184 5803 2141 115 0 0 chr10 38129838 38130116 -107459172 - AluSx SINE Alu -34 278 1 1814 184 0 7 chr10 38130751 38131055 -107458233 - AluJo SINE Alu -8 304 3 238 260 226 20 chr10 38131162 38131308 -107457980 - MIR SINE MIR -3 259 84 330 318 0 0 chr10 38131332 38131417 -107457871 + MER94 DNA DNA 49 133 -1 281 292 62 0 chr10 38131421 38131517 -107457771 - MIR3 SINE MIR -102 106 5 235 309 127 33 chr10 38132102 38132283 -107457005 + MIR SINE MIR 24 221 -41 182 323 156 11 chr10 38132766 38133029 -107456259 - L2 LINE L2 -978 2336 2036 555 229 7 46 chr10 38134095 38134248 -107455040 - MIR SINE MIR -40 222 76 198 0 0 0 chr10 38134616 38134638 -107454650 + (A)n Simple_repeat Simple_repeat 1 22 0 180 0 0 0 chr10 38137182 38137202 -107452086 + (TTCC)n Simple_repeat Simple_repeat 1 20 0 243 0 0 0 chr10 38137202 38137229 -107452059 + (T)n Simple_repeat Simple_repeat 1 27 0 22 0 0 0 chr10 38137456 38137478 -107451810 + AT_rich Low_complexity Low_complexity 1 22 0 394 286 32 8 chr10 38138817 38138943 -107450345 - MER5B DNA MER1_type -5 173 45 195 291 0 0 chr10 38138943 38138998 -107450290 - MER5B DNA MER1_type -82 96 42 188 298 0 0 chr10 38139097 38139154 -107450134 - MER5B DNA MER1_type -80 98 42 * 191 298 0 0 chr10 38139149 38139206 -107450082 - MER5B DNA MER1_type -80 98 42 * 212 281 0 0 chr10 38139201 38139258 -107450030 - MER5B DNA MER1_type -80 98 42 188 298 0 0 chr10 38139357 38139414 -107449874 - MER5B DNA MER1_type -80 98 42 * 191 298 0 0 chr10 38139409 38139466 -107449822 - MER5B DNA MER1_type -80 98 42 188 298 0 0 chr10 38139461 38139518 -107449770 - MER5B DNA MER1_type -80 98 42 * 188 298 0 0 chr10 38139617 38139674 -107449614 - MER5B DNA MER1_type -80 98 42 186 298 0 0 chr10 38139669 38139726 -107449562 - MER5B DNA MER1_type -80 98 42 * 188 298 0 0 chr10 38139877 38139934 -107449354 - MER5B DNA MER1_type -80 98 42 333 290 11 0 chr10 38139981 38140074 -107449214 - MER5B DNA MER1_type -80 98 5 1750 147 68 3 chr10 38140312 38140605 -107448683 - AluJb SINE Alu 0 312 1 446 148 37 0 chr10 38141860 38141941 -107447347 + LTR42 LTR ERVL 5 88 -407 388 343 77 21 chr10 38143194 38143480 -107445808 + LTR57-int LTR ERVL 1856 2157 -3186 304 275 141 21 chr10 38144303 38144445 -107444843 - MIR SINE MIR -71 191 33 875 261 77 19 chr10 38145383 38145708 -107443580 + L1ME4a LINE L1 5491 5834 -287 255 129 100 57 chr10 38145822 38145892 -107443396 + L1ME4a LINE L1 6048 6120 -1 461 262 163 0 chr10 38147990 38148162 -107441126 - MIR SINE MIR -14 248 49 2135 81 0 75 chr10 38148962 38149270 -107440018 + AluSc SINE Alu 1 285 -24 25 31 0 0 chr10 38149956 38149988 -107439300 + AT_rich Low_complexity Low_complexity 1 32 0 2229 101 0 29 chr10 38150121 38150427 -107438861 + AluSx SINE Alu 1 297 -15 1910 156 10 0 chr10 38151330 38151619 -107437669 + AluJb SINE Alu 1 292 -20 421 325 77 42 chr10 38153856 38154417 -107434871 + L2 LINE L2 2723 3304 -9 2112 108 14 14 chr10 38154565 38154862 -107434426 - AluSx SINE Alu -15 297 1 1724 176 68 8 chr10 38155117 38155487 -107433801 - L1MB8 LINE L1 0 6178 5787 204 40 0 0 chr10 38155491 38155516 -107433772 + (CA)n Simple_repeat Simple_repeat 2 26 0 312 27 0 0 chr10 38155516 38155540 -107433748 + (TG)n Simple_repeat Simple_repeat 1 61 0 312 27 0 0 chr10 38155540 38155577 -107433711 + (TG)n Simple_repeat Simple_repeat 2 38 0 3192 115 2 0 chr10 38155603 38156029 -107433259 - LTR3 LTR ERVK -1 431 5 387 105 0 0 chr10 38156043 38156100 -107433188 + (TATATG)n Simple_repeat Simple_repeat 4 60 0 1798 183 24 12 chr10 38156116 38156455 -107432833 - MER2 DNA MER2_type -2 343 1 8222 204 71 29 chr10 38156460 38156573 -107432715 - L1MB8 LINE L1 -406 5778 5671 2310 145 8 0 chr10 38156573 38156925 -107432363 + THE1A LTR MaLR 1 355 0 11266 94 34 1 chr10 38156925 38158454 -107430834 + THE1A-int LTR MaLR 1 1580 0 2179 128 11 40 chr10 38158454 38158829 -107430459 + THE1B LTR MaLR 1 364 0 8222 204 71 29 chr10 38158829 38160047 -107429241 - L1MB8 LINE L1 -513 5671 4506 2378 97 0 0 chr10 38160047 38160346 -107428942 + AluSc SINE Alu 1 299 -10 8222 204 71 29 chr10 38160346 38161759 -107427529 - L1MB8 LINE L1 -1678 4506 2917 804 152 41 174 chr10 38161750 38161951 -107427337 - L1MC3 LINE L1 0 7785 7640 * 1399 197 14 21 chr10 38161951 38162240 -107427048 - AluJo SINE Alu -25 287 1 804 152 41 174 chr10 38162240 38162354 -107426934 - L1MC3 LINE L1 -145 7640 7512 318 191 0 0 chr10 38162354 38162418 -107426870 - L1MD3 LINE L1 -210 7777 7512 283 281 0 0 chr10 38162418 38162482 -107426806 - L1MC3 LINE L1 -210 7575 7512 * 318 246 0 0 chr10 38162481 38162546 -107426742 - L1MC3 LINE L1 -209 7576 7512 288 218 0 0 chr10 38162555 38162610 -107426678 - L1MD3 LINE L1 -218 7777 7723 * 2546 184 25 4 chr10 38162588 38163071 -107426217 - L1MC3 LINE L1 -181 7604 7112 234 217 0 117 chr10 38163591 38163711 -107425577 + MER112 DNA MER1_type 149 254 -6 2532 207 53 17 chr10 38163713 38163940 -107425348 - MER68 LTR ERV1 0 562 345 6373 149 66 9 chr10 38163940 38165101 -107424187 + Tigger3b DNA MER2_type 3 1230 -1 2532 207 53 17 chr10 38165101 38165415 -107423873 - MER68 LTR ERV1 -217 345 1 236 327 196 6 chr10 38165605 38165773 -107423515 - Charlie8 DNA MER1_type -2209 208 9 1435 196 22 90 chr10 38165815 38166228 -107423060 - MLT1B LTR MaLR -2 388 4 191 245 0 0 chr10 38166276 38166325 -107422963 - L2 LINE L2 -671 2643 2595 24 53 0 0 chr10 38166327 38166365 -107422923 + AT_rich Low_complexity Low_complexity 1 38 0 25 65 0 0 chr10 38166435 38166481 -107422807 + AT_rich Low_complexity Low_complexity 1 46 0 2444 140 54 14 chr10 38168567 38168796 -107420492 - Tigger2 DNA MER2_type 0 2718 2500 363 89 0 0 chr10 38168796 38168852 -107420436 + (TA)n Simple_repeat Simple_repeat 2 57 0 2154 102 3 0 chr10 38168852 38169136 -107420152 - AluSg SINE Alu -25 285 1 2444 140 54 14 chr10 38169136 38169334 -107419954 - Tigger2 DNA MER2_type -217 2501 2273 400 180 0 0 chr10 38169331 38169392 -107419896 + MER8 DNA MER2_type 179 239 0 * 218 292 22 11 chr10 38170987 38171076 -107418212 + CT-rich Low_complexity Low_complexity 4 93 0 190 325 143 8 chr10 38171485 38171611 -107417677 + L2 LINE L2 2267 2409 -905 3936 127 41 73 chr10 38172345 38173130 -107416158 + L1MB3 LINE L1 5423 6182 -1 333 111 0 0 chr10 38173141 38173195 -107416093 + L1MD2 LINE L1 6305 6358 -1 319 206 76 11 chr10 38175630 38175722 -107413566 - MIR SINE MIR -74 188 91 393 189 110 0 chr10 38176065 38176192 -107413096 - MIR SINE MIR -50 212 72 1141 245 174 25 chr10 38177321 38177387 -107411901 - Charlie2 DNA MER1_type -4 2858 2803 1938 98 4 4 chr10 38177387 38177643 -107411645 - AluSq SINE Alu -14 299 44 1141 245 174 25 chr10 38177643 38178015 -107411273 - Charlie2 DNA MER1_type -59 2803 2488 2153 108 3 17 chr10 38178015 38178310 -107410978 + AluSx SINE Alu 1 291 -21 1141 245 174 25 chr10 38178310 38178705 -107410583 - Charlie2 DNA MER1_type -374 2488 1857 709 314 48 9 chr10 38178697 38179012 -107410276 - Charlie2 DNA MER1_type -2452 330 4 * 2372 111 26 31 chr10 38179050 38179438 -107409850 + MLT1B LTR MaLR 5 390 0 4318 200 65 70 chr10 38179438 38180813 -107408475 + MLT1B-int LTR MaLR 1 1369 -2 1569 199 75 11 chr10 38180820 38181181 -107408107 + MLT1B LTR MaLR 7 390 0 306 266 217 28 chr10 38181882 38182025 -107407263 - L1ME4a LINE L1 -90 6031 5862 2515 213 17 2 chr10 38182833 38183359 -107405929 - L1MB3 LINE L1 -1 6182 5649 1213 120 0 11 chr10 38184241 38184416 -107404872 - AluSq SINE Alu -7 306 134 2286 112 0 10 chr10 38184416 38184720 -107404568 - AluSq SINE Alu -12 301 1 763 206 32 37 chr10 38185800 38185989 -107403299 + MER5A DNA MER1_type 2 189 0 2149 129 10 3 chr10 38186880 38187183 -107402105 - AluSx SINE Alu -7 305 1 2080 109 3 36 chr10 38187241 38187544 -107401744 - AluSg SINE Alu -9 301 9 2257 114 10 0 chr10 38192821 38193120 -107396168 - AluSq SINE Alu -11 302 1 21 36 0 0 chr10 38193169 38193197 -107396091 + AT_rich Low_complexity Low_complexity 1 28 0 35 0 0 0 chr10 38193610 38193645 -107395643 + AT_rich Low_complexity Low_complexity 1 35 0 1319 184 28 31 chr10 38193645 38193791 -107395497 - AluJo SINE Alu -26 286 140 2187 128 0 3 chr10 38193791 38194095 -107395193 - AluSx SINE Alu -9 303 1 1319 184 28 31 chr10 38194095 38194203 -107395085 - AluJo SINE Alu -172 140 33 416 236 45 36 chr10 38194882 38194992 -107394296 + MIR SINE MIR 39 149 -59 409 277 88 20 chr10 38196816 38196964 -107392324 + L1M4 LINE L1 4243 4400 -1746 985 151 0 7 chr10 38196980 38197126 -107392162 + FRAM SINE Alu 14 158 -18 635 241 156 31 chr10 38197167 38197352 -107391936 - MIR SINE MIR -10 252 33 804 164 25 0 chr10 38197352 38197474 -107391814 - FLAM_C SINE Alu -8 125 1 635 241 156 31 chr10 38197474 38197512 -107391776 - MIR SINE MIR -229 33 1 1593 210 112 9 chr10 38197561 38197980 -107391308 + MLT1C LTR MaLR 6 467 0 2214 113 3 3 chr10 38198008 38198300 -107390988 + AluSx SINE Alu 1 292 -20 216 308 56 47 chr10 38198427 38198534 -107390754 + L2 LINE L2 2896 3003 -310 276 194 65 97 chr10 38199161 38199254 -107390034 - MIR SINE MIR -88 174 85 205 265 48 12 chr10 38199324 38199407 -107389881 + L2 LINE L2 3183 3268 -45 1621 171 62 20 chr10 38199676 38200322 -107388966 + L1MA7 LINE L1 5502 6291 0 272 247 99 62 chr10 38200600 38200762 -107388526 - MIR SINE MIR -10 252 85 1624 98 0 0 chr10 38201804 38202018 -107387270 + AluSg/x SINE Alu 93 306 -6 411 255 90 35 chr10 38202075 38202220 -107387068 + L3 LINE CR1 1259 1411 -166 339 302 151 35 chr10 38202455 38202627 -107386661 - MIR SINE MIR -65 197 6 2623 77 0 0 chr10 38202680 38202991 -107386297 + AluY SINE Alu 1 311 0 1780 121 28 0 chr10 38203121 38203370 -107385918 + AluSx SINE Alu 49 304 -8 1611 153 50 37 chr10 38203662 38203962 -107385326 - AluJo SINE Alu -8 304 1 183 184 0 0 chr10 38206992 38207030 -107382258 + CT-rich Low_complexity Low_complexity 2 39 0 333 0 0 0 chr10 38207273 38207310 -107381978 + (TG)n Simple_repeat Simple_repeat 1 37 0 1573 184 26 49 chr10 38207402 38207793 -107381495 - MLT1B LTR MaLR -8 382 1 554 39 13 0 chr10 38207887 38207964 -107381324 + (TC)n Simple_repeat Simple_repeat 1 78 0 2409 99 0 6 chr10 38208007 38208321 -107380967 - AluSx SINE Alu 0 312 1 1821 130 4 19 chr10 38208716 38208985 -107380303 - AluJo SINE Alu -16 296 32 2011 154 3 25 chr10 38209736 38210055 -107379233 - AluJb SINE Alu 0 312 1 1954 150 0 0 chr10 38210470 38210750 -107378538 + AluJo SINE Alu 1 280 -32 324 0 0 0 chr10 38210752 38210788 -107378500 + (TAA)n Simple_repeat Simple_repeat 2 37 0 245 259 0 54 chr10 38211085 38211102 -107378186 + T-rich Low_complexity Low_complexity 5 21 -89 2283 152 8 19 chr10 38211102 38211471 -107377817 - MLT1A1 LTR MaLR 0 365 1 245 259 0 54 chr10 38211471 38211565 -107377723 + T-rich Low_complexity Low_complexity 21 110 0 1498 315 64 24 chr10 38211789 38212709 -107376579 + L1MEc LINE L1 35 991 -5405 684 217 19 0 chr10 38212710 38212871 -107376417 + L1MEc LINE L1 2394 2557 -3658 357 341 24 0 chr10 38213925 38214048 -107375240 + MIR SINE MIR 13 138 -124 207 256 183 24 chr10 38214508 38214590 -107374698 + L2 LINE L2 3169 3263 -9 1641 139 20 51 chr10 38215209 38215504 -107373784 + AluJo SINE Alu 1 286 -26 183 42 0 0 chr10 38215504 38215528 -107373760 + (CAAAC)n Simple_repeat Simple_repeat 2 25 0 1073 108 0 29 chr10 38215861 38216131 -107373157 + (TTCC)n Simple_repeat Simple_repeat 4 438 0 2392 105 0 0 chr10 38216527 38216831 -107372457 - AluSx SINE Alu -8 304 1 1496 132 8 0 chr10 38216886 38217121 -107372167 + L1MA6 LINE L1 6059 6295 -5 2594 70 0 0 chr10 38217732 38218034 -107371254 + AluSc SINE Alu 1 302 -7 341 281 10 10 chr10 38218081 38218177 -107371111 - MIR SINE MIR -43 219 124 207 293 225 0 chr10 38218478 38218669 -107370619 - L2 LINE L2 -357 2957 2724 673 164 0 0 chr10 38218758 38218862 -107370426 + AluJb SINE Alu 2 105 -207 237 154 0 0 chr10 38218862 38218901 -107370387 + MADE1 DNA Mariner 42 80 0 617 259 186 22 chr10 38219371 38219645 -107369643 + L2 LINE L2 2982 3300 -13 2132 139 0 16 chr10 38219909 38220225 -107369063 - AluSx SINE Alu -1 311 1 324 0 0 0 chr10 38221399 38221435 -107367853 + (CA)n Simple_repeat Simple_repeat 2 37 0 396 351 146 0 chr10 38221609 38221814 -107367474 - MIR SINE MIR -12 250 16 2215 231 36 91 chr10 38222114 38222428 -107366860 - MER82 DNA MER2_type 0 653 396 1818 143 0 21 chr10 38222428 38222715 -107366573 + AluJo SINE Alu 12 292 -20 2215 231 36 91 chr10 38222715 38223091 -107366197 - MER82 DNA MER2_type -257 396 1 379 287 133 11 chr10 38223095 38223283 -107366005 - MIR SINE MIR -9 253 43 1621 181 17 10 chr10 38223313 38223605 -107365683 - AluJo SINE Alu -14 298 5 2289 100 0 10 chr10 38223862 38224162 -107365126 - AluSx SINE Alu -15 297 1 257 329 0 26 chr10 38224471 38224547 -107364741 - MIR SINE MIR -113 149 76 183 326 166 21 chr10 38225246 38225433 -107363855 - MIR SINE MIR -15 247 34 2435 87 0 0 chr10 38226585 38226885 -107362403 - AluY SINE Alu -11 300 1 719 194 0 8 chr10 38227847 38227998 -107361290 + FLAM_A SINE Alu 3 133 0 1892 125 7 49 chr10 38229194 38229499 -107359789 + AluJo SINE Alu 14 305 -7 2443 93 30 35 chr10 38230006 38230074 -107359214 - THE1B LTR MaLR 0 364 297 2423 87 0 0 chr10 38230074 38230372 -107358916 - AluY SINE Alu -12 299 2 2443 93 30 35 chr10 38230372 38230669 -107358619 - THE1B LTR MaLR -67 297 1 2228 127 3 0 chr10 38231755 38232055 -107357233 + AluSx SINE Alu 1 301 -11 409 264 151 6 chr10 38232276 38232435 -107356853 - MLT1J2 LTR MaLR -6 444 263 408 245 168 7 chr10 38232480 38232623 -107356665 - MLT1J1 LTR MaLR -277 169 4 1363 173 157 0 chr10 38233907 38234001 -107355287 + AluJo SINE Alu 2 80 -222 215 56 56 0 chr10 38234001 38234037 -107355251 + A-rich Low_complexity Low_complexity 4 41 0 1363 173 157 0 chr10 38234037 38234197 -107355091 + AluJo SINE Alu 80 296 -6 238 315 7 56 chr10 38234284 38234427 -107354861 + MIR SINE MIR 106 241 -21 1856 126 20 7 chr10 38235322 38235615 -107353673 + AluSx SINE Alu 1 297 -15 1677 149 0 51 chr10 38235929 38236245 -107353043 + AluJo SINE Alu 1 300 -12 1387 140 93 36 chr10 38236260 38236538 -107352750 + AluJo SINE Alu 1 294 -18 224 358 41 41 chr10 38237250 38237373 -107351915 - MIR SINE MIR -118 144 22 1690 137 48 34 chr10 38237498 38237791 -107351497 - AluJo SINE Alu -15 297 1 23 0 0 0 chr10 38238279 38238302 -107350986 + AT_rich Low_complexity Low_complexity 1 23 0 1520 163 14 28 chr10 38238305 38238588 -107350700 - AluJo SINE Alu -33 279 1 767 211 0 0 chr10 38238710 38238843 -107350445 + FLAM_A SINE Alu 1 133 0 2267 63 0 30 chr10 38238854 38239188 -107350100 + AluY SINE Alu 1 311 0 875 94 8 0 chr10 38239812 38239929 -107349359 - MSTB1 LTR MaLR 0 432 315 2446 110 31 3 chr10 38239930 38240284 -107349004 + THE1B LTR MaLR 1 364 0 1778 139 3 63 chr10 38240345 38240677 -107348611 - AluJo SINE Alu 0 312 1 254 328 39 0 chr10 38240680 38240808 -107348480 - L2 LINE L2 -957 2357 2225 2052 130 0 9 chr10 38241114 38241429 -107347859 - AluSx SINE Alu 0 312 1 1000 122 0 19 chr10 38241875 38242074 -107347214 - AluSg/x SINE Alu 0 325 130 391 270 40 52 chr10 38242446 38242620 -107346668 - MIR SINE MIR -8 254 83 1541 194 3 28 chr10 38242687 38243006 -107346282 - AluJb SINE Alu -1 311 1 340 286 298 17 chr10 38243409 38243587 -107345701 - MIR SINE MIR -14 248 21 2118 109 10 6 chr10 38243588 38243899 -107345389 + AluSx SINE Alu 1 312 0 2417 165 52 0 chr10 38244248 38244653 -107344635 - MSTB LTR MaLR 0 426 1 2158 117 7 0 chr10 38244809 38245117 -107344171 + AluSq SINE Alu 1 310 -3 5684 146 5 0 chr10 38245826 38246709 -107342579 - L1PA15 LINE L1 0 6165 5279 1945 112 54 17 chr10 38246726 38247020 -107342268 - AluSx SINE Alu -7 305 1 1899 141 0 10 chr10 38248105 38248404 -107340884 - AluJo SINE Alu -16 296 1 198 245 0 19 chr10 38248605 38248658 -107340630 + L2 LINE L2 3262 3313 0 1388 173 30 60 chr10 38248820 38249120 -107340168 - AluJb SINE Alu -21 291 1 220 298 0 64 chr10 38249163 38249257 -107340031 - MIR SINE MIR -71 191 104 617 294 40 78 chr10 38249409 38249834 -107339454 + MLT1I LTR MaLR 1 409 0 216 184 0 0 chr10 38249862 38249911 -107339377 + (TGGA)n Simple_repeat Simple_repeat 4 52 0 3574 126 20 32 chr10 38249925 38250490 -107338798 + L1MB2 LINE L1 5574 6133 -38 2257 73 21 0 chr10 38250490 38250776 -107338512 - AluSq SINE Alu -21 292 1 3574 126 20 32 chr10 38250776 38250812 -107338476 + L1MB2 LINE L1 6133 6168 -3 1911 139 3 13 chr10 38250874 38251175 -107338113 - AluSx SINE Alu -14 298 1 779 205 110 50 chr10 38251177 38251430 -107337858 - MIR SINE MIR -1 261 13 189 0 0 0 chr10 38252079 38252100 -107337188 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 2942 158 6 6 chr10 38252100 38252580 -107336708 - L1PA16 LINE L1 -23 6143 5664 304 268 0 0 chr10 38252876 38252973 -107336315 + (TA)n Simple_repeat Simple_repeat 1 97 0 612 260 5 78 chr10 38253009 38253201 -107336087 - MER5B DNA MER1_type 0 178 1 1484 174 66 41 chr10 38253793 38254156 -107335132 - THE1C LTR MaLR -3 372 1 1583 183 35 0 chr10 38254434 38254723 -107334565 - AluJo SINE Alu -13 299 1 238 255 98 20 chr10 38254815 38254917 -107334371 + MIR3 SINE MIR 50 159 -49 2007 103 11 0 chr10 38255191 38255472 -107333816 - AluSx SINE Alu -19 293 10 243 200 61 130 chr10 38256018 38256133 -107333155 - MER69A DNA AcHobo -15 162 56 23 54 0 0 chr10 38259280 38259317 -107329971 + AT_rich Low_complexity Low_complexity 1 37 0 317 167 9 46 chr10 38259981 38260089 -107329199 + C-rich Low_complexity Low_complexity 6 109 0 195 14 100 43 chr10 38260847 38260917 -107328371 + (CCGCG)n Simple_repeat Simple_repeat 4 77 0 23 0 0 0 chr10 38260921 38260944 -107328344 + GC_rich Low_complexity Low_complexity 1 23 0 238 157 14 14 chr10 38261323 38261393 -107327895 + (CCG)n Simple_repeat Simple_repeat 3 72 0 39 88 0 0 chr10 38261396 38261498 -107327790 + GC_rich Low_complexity Low_complexity 1 102 0 21 0 0 0 chr10 38262352 38262373 -107326915 + GC_rich Low_complexity Low_complexity 1 21 0 258 311 22 0 chr10 38263518 38263608 -107325680 + MIR SINE MIR 117 208 -54 27 49 0 0 chr10 38263947 38263988 -107325300 + GC_rich Low_complexity Low_complexity 1 41 0 337 247 17 17 chr10 38264173 38264347 -107324941 + CT-rich Low_complexity Low_complexity 2 175 0 1806 170 0 0 chr10 38266180 38266474 -107322814 + AluJo SINE Alu 1 294 -18 703 171 23 16 chr10 38266546 38266675 -107322613 + AluJo SINE Alu 1 130 -172 978 157 15 46 chr10 38266698 38266722 -107322566 + AluJo SINE Alu 118 141 -171 1884 147 0 10 chr10 38266722 38267022 -107322266 + AluSx SINE Alu 1 297 -15 978 157 15 46 chr10 38267022 38267194 -107322094 + AluJo SINE Alu 141 308 -4 230 247 118 12 chr10 38267761 38267846 -107321442 - MLT1L LTR MaLR -46 569 476 266 186 38 49 chr10 38267971 38268084 -107321204 - MLT1J2 LTR MaLR -293 218 72 258 196 20 0 chr10 38268045 38268096 -107321192 - LTR67 LTR ERVL -404 153 102 * 1930 110 0 36 chr10 38268473 38268782 -107320506 + AluSx SINE Alu 1 298 -14 2022 129 0 10 chr10 38268875 38269185 -107320103 - AluSx SINE Alu -5 307 1 21 0 0 0 chr10 38269208 38269229 -107320059 + AT_rich Low_complexity Low_complexity 1 21 0 209 293 12 73 chr10 38269844 38269870 -107319418 - L2 LINE L2 -10 3262 3236 1037 246 93 60 chr10 38269870 38270407 -107318881 - MLT1H1 LTR MaLR 0 555 1 209 293 12 73 chr10 38270407 38270462 -107318826 - L2 LINE L2 -36 3236 3186 602 283 133 30 chr10 38270853 38271185 -107318103 - MLT1L LTR MaLR -59 556 191 375 200 12 12 chr10 38271210 38271290 -107317998 - MLT1L LTR MaLR -535 80 1 2012 121 3 0 chr10 38272273 38272563 -107316725 - AluSx SINE Alu -21 291 1 759 100 0 0 chr10 38272747 38272857 -107316431 + (TTCC)n Simple_repeat Simple_repeat 3 112 0 1539 153 7 64 chr10 38272873 38273168 -107316120 - AluJo SINE Alu -34 278 1 188 65 0 32 chr10 38273825 38273856 -107315432 + (TTTTC)n Simple_repeat Simple_repeat 2 31 0 547 274 21 42 chr10 38273865 38274055 -107315233 - MLT1L LTR MaLR -9 606 421 529 257 57 94 chr10 38274109 38274329 -107314959 - MLT1L LTR MaLR -360 255 45 1592 195 0 7 chr10 38274329 38274657 -107314631 + AluJo SINE Alu 1 312 0 529 257 57 94 chr10 38274657 38274701 -107314587 - MLT1L LTR MaLR -570 45 1 2228 98 3 0 chr10 38274789 38275095 -107314193 - AluSp SINE Alu -6 307 1 281 268 10 22 chr10 38275322 38275463 -107313825 - L1ME LINE L1 -355 5878 5736 313 61 0 20 chr10 38275479 38275523 -107313765 - AluSx SINE Alu 0 300 257 1523 98 0 5 chr10 38275523 38275726 -107313562 - AluSx SINE Alu -110 202 1 228 324 89 27 chr10 38275775 38276000 -107313288 - L1ME LINE L1 -570 5620 5382 1033 301 97 40 chr10 38276005 38276084 -107313204 - L1ME LINE L1 -840 5375 5302 1960 127 7 10 chr10 38276084 38276413 -107312875 + AluSx SINE Alu 1 312 0 1033 301 97 40 chr10 38276413 38276975 -107312313 - L1ME LINE L1 -913 5302 4698 385 226 26 35 chr10 38277007 38277122 -107312166 - L1ME LINE L1 -2847 3368 3255 269 280 137 35 chr10 38277122 38277662 -107311626 - L1ME LINE L1 -3217 2998 2338 829 200 0 6 chr10 38277663 38277828 -107311460 - FRAM SINE Alu 0 40 1 2150 234 100 23 chr10 38277918 38278640 -107310648 - HsTC2 DNA Tc2 -2 1896 4 303 211 19 87 chr10 38278737 38278841 -107310447 - L1MC4 LINE L1 -388 7654 7558 302 226 6 0 chr10 38279136 38279209 -107310079 - L1ME LINE L1 -862 1714 1598 225 292 123 0 chr10 38279468 38279598 -107309690 - L1ME LINE L1 -5941 264 119 2182 110 0 0 chr10 38279695 38279995 -107309293 - AluSx SINE Alu -12 300 1 259 242 32 0 chr10 38280471 38280533 -107308755 + L1ME4a LINE L1 5504 5567 -599 691 268 129 44 chr10 38280548 38280820 -107308468 - MLT1H LTR MaLR -3 546 252 236 30 30 0 chr10 38280844 38280877 -107308411 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 360 285 72 117 chr10 38280927 38281001 -107308287 + L1ME4a LINE L1 5684 5760 -361 1482 148 86 143 chr10 38281001 38281455 -107307833 + MSTA LTR MaLR 1 428 0 360 285 72 117 chr10 38281455 38281826 -107307462 + L1ME4a LINE L1 5760 6109 -12 826 150 0 0 chr10 38282763 38283115 -107306173 + AluJo SINE Alu 2 353 0 243 0 0 0 chr10 38283255 38283282 -107306006 + (CA)n Simple_repeat Simple_repeat 1 27 0 645 144 0 0 chr10 38285885 38285975 -107303313 - AluJb SINE Alu -20 292 203 27 112 0 0 chr10 38286031 38286156 -107303132 + AT_rich Low_complexity Low_complexity 1 125 0 733 251 76 63 chr10 38286178 38286560 -107302728 - L1ME4a LINE L1 -84 6037 5651 245 325 61 0 chr10 38286882 38286996 -107302292 + MIR SINE MIR 72 192 -70 211 292 7 56 chr10 38287310 38287454 -107301834 + L2 LINE L2 2919 3055 -258 537 220 15 15 chr10 38287501 38287633 -107301655 + MIR SINE MIR 120 251 -11 1137 123 0 0 chr10 38287678 38287755 -107301533 + (CCA)n Simple_repeat Simple_repeat 1 256 0 1137 123 0 0 chr10 38287755 38287934 -107301354 + (CCA)n Simple_repeat Simple_repeat 1 179 0 980 159 9 8 chr10 38287962 38288316 -107300972 + (CCA)n Simple_repeat Simple_repeat 1 354 0 228 261 0 0 chr10 38288349 38288395 -107300893 + L2 LINE L2 3261 3306 -7 372 357 50 76 chr10 38288573 38289032 -107300256 + L2 LINE L2 2824 3270 -2 213 301 0 0 chr10 38289455 38289548 -107299740 + (TG)n Simple_repeat Simple_repeat 1 93 0 506 268 0 6 chr10 38289559 38289738 -107299550 + (TG)n Simple_repeat Simple_repeat 2 179 0 439 279 33 33 chr10 38289900 38290083 -107299205 + LTR16C LTR ERVL 303 485 -6 737 125 45 27 chr10 38290525 38290637 -107298651 - FLAM_A SINE Alu -18 124 11 271 250 96 115 chr10 38290729 38291085 -107298203 - L2 LINE L2 -38 3234 2886 1855 151 0 39 chr10 38291731 38291922 -107297366 - AluJo SINE Alu -13 299 123 1898 113 0 0 chr10 38291922 38292170 -107297118 + AluSc SINE Alu 41 288 -21 1855 151 0 39 chr10 38292170 38292289 -107296999 - AluJo SINE Alu -189 123 1 2262 103 3 3 chr10 38292979 38293281 -107296007 + AluSq SINE Alu 1 302 -11 1603 189 21 3 chr10 38293553 38293839 -107295449 + AluJo SINE Alu 1 291 -21 281 275 124 67 chr10 38294105 38294298 -107294990 + MIR SINE MIR 33 236 -26 5383 197 49 21 chr10 38294845 38295931 -107293357 - L1MCa LINE L1 -4970 1456 331 1509 173 39 33 chr10 38295931 38296237 -107293051 - AluJo SINE Alu -4 308 1 5383 197 49 21 chr10 38296237 38296375 -107292913 - L1MCa LINE L1 -6095 331 198 2134 129 0 10 chr10 38296526 38296836 -107292452 - AluSx SINE Alu -5 307 1 21 0 0 0 chr10 38296859 38296880 -107292408 + AT_rich Low_complexity Low_complexity 1 21 0 209 293 12 73 chr10 38297495 38297521 -107291767 - L2 LINE L2 -10 3262 3236 1152 238 99 65 chr10 38297521 38298058 -107291230 - MLT1H1 LTR MaLR 0 555 1 209 293 12 73 chr10 38298058 38298113 -107291175 - L2 LINE L2 -36 3236 3186 585 288 138 22 chr10 38298516 38298836 -107290452 - MLT1L LTR MaLR -68 547 191 361 200 12 12 chr10 38298861 38298941 -107290347 - MLT1L LTR MaLR -535 80 1 2122 121 3 0 chr10 38299920 38300210 -107289078 - AluSx SINE Alu -21 291 1 831 93 0 0 chr10 38300394 38300512 -107288776 + (TTCC)n Simple_repeat Simple_repeat 3 120 0 1638 149 7 64 chr10 38300528 38300823 -107288465 - AluJo SINE Alu -34 278 1 188 65 0 32 chr10 38301480 38301511 -107287777 + (TTTTC)n Simple_repeat Simple_repeat 2 31 0 553 281 65 35 chr10 38301520 38301751 -107287537 - MLT1L LTR MaLR -9 606 369 563 245 53 91 chr10 38301764 38301984 -107287304 - MLT1L LTR MaLR -360 255 45 1712 192 0 7 chr10 38301984 38302312 -107286976 + AluJo SINE Alu 1 312 0 563 245 53 91 chr10 38302312 38302356 -107286932 - MLT1L LTR MaLR -570 45 1 2334 98 3 0 chr10 38302444 38302750 -107286538 - AluSp SINE Alu -6 307 1 289 268 10 22 chr10 38302977 38303118 -107286170 - L1ME LINE L1 -355 5809 5667 308 82 0 20 chr10 38303134 38303178 -107286110 - AluSx SINE Alu 0 302 259 1600 98 0 5 chr10 38303178 38303381 -107285907 - AluSx SINE Alu -110 202 1 260 320 95 31 chr10 38303430 38303652 -107285636 - L1ME LINE L1 -570 5551 5316 2237 99 3 3 chr10 38303738 38304040 -107285248 + AluSq SINE Alu 1 302 -11 1579 192 21 3 chr10 38304312 38304598 -107284690 + AluJo SINE Alu 1 291 -21 281 275 124 67 chr10 38304864 38305057 -107284231 + MIR SINE MIR 33 236 -26 6099 201 46 19 chr10 38305604 38306690 -107282598 - L1MCa LINE L1 -4970 1456 322 1509 173 39 33 chr10 38306690 38306996 -107282292 - AluJo SINE Alu -4 308 1 6099 201 46 19 chr10 38306996 38307309 -107281979 - L1MCa LINE L1 -6104 322 19 2406 91 0 0 chr10 38308037 38308333 -107280955 + AluSx SINE Alu 1 296 -16 476 272 86 39 chr10 38308643 38308900 -107280388 - L1ME LINE L1 -312 5809 5541 22 94 0 0 chr10 38308961 38309025 -107280263 + AT_rich Low_complexity Low_complexity 1 64 0 9817 25 0 0 chr10 38309207 38310338 -107278950 - L1PA3 LINE L1 -920 5226 4096 7982 29 4 14 chr10 38310338 38310610 -107278678 + L1PA3 LINE L1 5214 5487 -668 2827 16 0 0 chr10 38310610 38310918 -107278370 + AluYb8 SINE Alu 1 308 -10 7982 29 4 14 chr10 38310918 38311595 -107277693 + L1PA3 LINE L1 5487 6154 -1 1598 209 51 0 chr10 38311981 38312297 -107276991 - MER2 DNA MER2_type 0 345 14 2647 139 65 5 chr10 38313991 38314408 -107274880 - L1PA16 LINE L1 -1 6165 5724 265 235 61 31 chr10 38314507 38314605 -107274683 + L1MC4 LINE L1 6615 6715 -1327 381 300 0 13 chr10 38314894 38315044 -107274244 + CT-rich Low_complexity Low_complexity 2 149 0 21 57 0 0 chr10 38315790 38315825 -107273463 + AT_rich Low_complexity Low_complexity 1 35 0 2033 129 0 0 chr10 38317323 38317642 -107271646 - AluSx SINE Alu 0 331 13 339 318 53 8 chr10 38317753 38317885 -107271403 + MIR3 SINE MIR 64 201 -7 1638 189 13 10 chr10 38318365 38318672 -107270616 + AluJb SINE Alu 1 308 -4 438 247 41 53 chr10 38319198 38319368 -107269920 - Charlie8 DNA MER1_type -2152 265 98 1618 175 0 18 chr10 38319368 38319679 -107269609 - AluJo SINE Alu 0 314 9 188 222 167 0 chr10 38319940 38319994 -107269294 - MIR SINE MIR -140 122 60 2175 115 3 13 chr10 38320149 38320284 -107269004 + AluSx SINE Alu 1 136 -176 2215 123 0 0 chr10 38320284 38320594 -107268694 + AluSq SINE Alu 1 310 -3 2175 115 3 13 chr10 38320594 38320772 -107268516 + AluSx SINE Alu 136 311 -1 235 263 35 0 chr10 38321216 38321273 -107268015 + MIR SINE MIR 194 252 -10 1889 158 0 7 chr10 38324033 38324324 -107264964 + AluJb SINE Alu 1 289 -23 1928 151 0 0 chr10 38324922 38325272 -107264016 + AluSx SINE Alu 5 354 0 346 356 52 0 chr10 38326231 38326366 -107262922 + MIR3 SINE MIR 1 142 -66 187 289 0 0 chr10 38326372 38326417 -107262871 - L2 LINE L2 0 3313 3269 2509 75 0 0 chr10 38326548 38326853 -107262435 - AluY SINE Alu -6 305 1 2134 130 3 0 chr10 38326940 38327240 -107262048 - AluSx SINE Alu -11 301 1 198 71 0 0 chr10 38328068 38328096 -107261192 + (TG)n Simple_repeat Simple_repeat 1 28 0 2061 120 0 0 chr10 38329399 38329675 -107259613 - AluSx SINE Alu -12 300 25 2027 120 7 0 chr10 38330004 38330295 -107258993 - AluSx SINE Alu -19 293 1 4617 107 6 3 chr10 38331648 38332285 -107257003 + LTR9B LTR ERV1 6 644 0 267 228 121 53 chr10 38332715 38332865 -107256423 - MIR SINE MIR -71 191 24 481 370 15 0 chr10 38333034 38333237 -107256051 - MIR SINE MIR -28 234 29 1811 161 50 56 chr10 38333328 38333504 -107255784 - L1PA16 LINE L1 -16 6150 5975 1762 168 35 0 chr10 38333504 38333789 -107255499 - AluJo SINE Alu -17 295 1 1811 161 50 56 chr10 38333789 38333972 -107255316 - L1PA16 LINE L1 -191 5975 5793 1452 150 19 0 chr10 38334269 38334529 -107254759 - L1MA4 LINE L1 0 6300 6036 379 283 9 6 chr10 38335316 38335669 -107253619 + (CA)n Simple_repeat Simple_repeat 1 354 0 497 201 13 13 chr10 38336343 38336502 -107252786 + (TG)n Simple_repeat Simple_repeat 2 160 0 520 276 45 0 chr10 38337056 38337212 -107252076 - MIR SINE MIR -19 243 81 3158 123 2 0 chr10 38337851 38338297 -107250991 - L1PA13 LINE L1 -2 6161 5715 423 309 66 51 chr10 38338303 38338905 -107250383 - L1MDa LINE L1 -842 1648 1012 1922 132 0 21 chr10 38339803 38340130 -107249158 + AluSx SINE Alu 1 321 0 186 359 145 19 chr10 38340221 38340483 -107248805 + L2 LINE L2 2084 2378 -936 1586 93 6 0 chr10 38340674 38341029 -107248259 - L1PB2 LINE L1 -2 6149 5717 729 169 121 61 chr10 38341030 38341261 -107248027 - ORSL DNA AcHobo -1 274 30 2395 111 44 39 chr10 38341407 38341769 -107247519 - THE1B LTR MaLR 0 364 1 293 246 0 0 chr10 38341785 38341846 -107247442 - Tigger5 DNA MER2_type 0 2323 2263 280 155 17 69 chr10 38341866 38341924 -107247364 - Tigger5 DNA MER2_type -2268 55 1 240 226 16 0 chr10 38343867 38343929 -107245359 + CT-rich Low_complexity Low_complexity 2 64 0 189 74 0 0 chr10 38343998 38344025 -107245263 + (CAAAA)n Simple_repeat Simple_repeat 4 30 0 1572 152 14 45 chr10 38344251 38344563 -107244725 - AluJb SINE Alu 0 312 11 1000 251 91 52 chr10 38345394 38345832 -107243456 + MLT1J LTR MaLR 1 455 -56 4167 186 35 8 chr10 38345945 38347029 -107242259 + L1MD2 LINE L1 4883 5992 -250 252 62 0 0 chr10 38347034 38347066 -107242222 - MLT2D LTR ERVL 0 414 383 351 78 0 0 chr10 38347069 38347120 -107242168 + (CA)n Simple_repeat Simple_repeat 2 52 0 362 166 11 57 chr10 38347145 38347295 -107241993 + GA-rich Low_complexity Low_complexity 2 144 -24 297 51 0 0 chr10 38347295 38347334 -107241954 + (CA)n Simple_repeat Simple_repeat 2 40 0 362 166 11 57 chr10 38347334 38347358 -107241930 + GA-rich Low_complexity Low_complexity 144 168 0 268 191 0 0 chr10 38347394 38347436 -107241852 - MLT2B1 LTR ERVL -118 402 361 2417 68 3 0 chr10 38347455 38347750 -107241538 + AluY SINE Alu 1 296 -15 1885 124 11 11 chr10 38347851 38348134 -107241154 - AluSx SINE Alu -29 283 1 1544 204 35 9 chr10 38348151 38348470 -107240818 - MLT2B1 LTR ERVL -193 327 1 261 50 100 0 chr10 38348486 38348526 -107240762 + L1MC/D LINE L1 5403 5446 -724 1224 222 29 52 chr10 38348537 38348816 -107240472 + L1MD2 LINE L1 6022 6293 -66 2204 121 3 3 chr10 38348816 38349123 -107240165 - AluSq SINE Alu -6 307 1 1224 222 29 52 chr10 38349123 38349186 -107240102 + L1MD2 LINE L1 6293 6356 -3 2471 99 11 62 chr10 38349544 38349918 -107239370 - THE1A LTR MaLR 0 355 1 926 269 118 26 chr10 38350588 38351005 -107238283 + L2 LINE L2 1776 2230 -1084 381 179 51 0 chr10 38351118 38351196 -107238092 - MER20 DNA MER1_type -3 216 135 317 197 28 22 chr10 38351236 38351414 -107237874 + (ATATG)n Simple_repeat Simple_repeat 2 180 0 243 0 0 0 chr10 38351468 38351495 -107237793 + (ATAGG)n Simple_repeat Simple_repeat 4 30 0 842 172 21 0 chr10 38351495 38351640 -107237648 - MER20 DNA MER1_type -71 148 1 468 77 0 0 chr10 38353144 38353209 -107236079 + (TTCC)n Simple_repeat Simple_repeat 1 65 0 2071 125 20 0 chr10 38353209 38353506 -107235782 - AluSx SINE Alu -9 303 1 857 236 16 0 chr10 38353544 38353735 -107235553 - L1PA16 LINE L1 -16 6150 5957 820 177 0 7 chr10 38353762 38353903 -107235385 - AluJb SINE Alu 0 312 173 324 329 40 27 chr10 38354244 38354393 -107234895 + MIR3 SINE MIR 48 198 -10 1915 156 0 13 chr10 38355717 38356019 -107233269 + AluJb SINE Alu 1 298 -14 2060 127 6 19 chr10 38356121 38356435 -107232853 + AluSx SINE Alu 1 310 -2 1868 174 0 7 chr10 38356683 38356987 -107232301 + AluJo SINE Alu 1 302 -10 408 308 55 16 chr10 38357014 38357196 -107232092 - MLT1J2 LTR MaLR -21 429 241 248 272 88 35 chr10 38357350 38357464 -107231824 + MLT1L LTR MaLR 225 344 -271 1118 149 64 0 chr10 38357464 38357652 -107231636 + MSTA LTR MaLR 211 410 -18 185 194 0 0 chr10 38358844 38358880 -107230408 - L2 LINE L2 0 3313 3278 2249 110 3 0 chr10 38359038 38359347 -107229941 + AluSx SINE Alu 1 310 -2 285 358 68 38 chr10 38359359 38359747 -107229541 - L2 LINE L2 -226 3046 2635 555 285 18 24 chr10 38359764 38359929 -107229359 + MER20 DNA MER1_type 56 219 0 233 356 144 17 chr10 38360265 38360383 -107228905 - MIR3 SINE MIR -46 162 30 22 0 0 0 chr10 38360477 38360499 -107228789 + AT_rich Low_complexity Low_complexity 1 22 0 274 75 75 0 chr10 38360519 38360586 -107228702 + (TA)n Simple_repeat Simple_repeat 1 72 0 21 71 0 0 chr10 38360674 38360716 -107228572 + AT_rich Low_complexity Low_complexity 1 42 0 264 159 68 6 chr10 38360727 38360890 -107228398 + (TA)n Simple_repeat Simple_repeat 1 173 0 31 0 0 0 chr10 38360890 38360921 -107228367 + AT_rich Low_complexity Low_complexity 1 31 0 2419 62 0 7 chr10 38360942 38361247 -107228041 + AluY SINE Alu 1 303 -8 2144 154 35 27 chr10 38361247 38361448 -107227840 - MLT1B LTR MaLR -9 381 174 772 204 80 12 chr10 38361448 38361610 -107227678 - FAM SINE Alu -2 173 1 2144 154 35 27 chr10 38361610 38361784 -107227504 - MLT1B LTR MaLR -216 174 3 25 31 0 0 chr10 38363873 38363905 -107225383 + AT_rich Low_complexity Low_complexity 1 32 0 1845 112 53 40 chr10 38363929 38364232 -107225056 - AluSx SINE Alu -5 307 1 337 239 34 48 chr10 38364391 38364600 -107224688 - L1M4c LINE L1 -2859 3523 3318 3863 219 50 18 chr10 38364633 38366202 -107223086 - L1MB7 LINE L1 -17 6665 5051 2091 244 85 30 chr10 38366199 38367067 -107222221 - L1MB7 LINE L1 -4835 1707 870 * 280 302 152 15 chr10 38367844 38368243 -107221045 - L1M4c LINE L1 -860 1883 1279 807 180 0 0 chr10 38368267 38368389 -107220899 - FLAM_C SINE Alu -20 123 2 898 193 33 52 chr10 38368422 38368634 -107220654 + MER20 DNA MER1_type 6 213 -6 2372 155 11 16 chr10 38369026 38369393 -107219895 - MLT1A1 LTR MaLR 0 365 1 1993 210 47 31 chr10 38369403 38369827 -107219461 - MLT1A1-int LTR MaLR -11 1724 1294 3027 238 145 26 chr10 38369852 38370888 -107218400 - MLT1A1-int LTR MaLR -576 1159 1 1866 194 26 12 chr10 38370890 38371236 -107218052 - MLT1A1 LTR MaLR -4 361 11 1861 163 3 26 chr10 38371841 38372154 -107217134 - AluJo SINE Alu -6 306 1 181 401 23 8 chr10 38372422 38372554 -107216734 + L2 LINE L2 3172 3305 -8 180 385 0 0 chr10 38372716 38372781 -107216507 - MIR3 SINE MIR 0 208 144 530 233 70 108 chr10 38372782 38373169 -107216119 - MLT1J LTR MaLR -2 509 138 297 358 37 31 chr10 38373327 38373489 -107215799 - L2 LINE L2 -609 2705 2543 204 129 16 97 chr10 38373636 38373698 -107215590 + T-rich Low_complexity Low_complexity 1 57 0 2183 116 0 0 chr10 38374325 38374714 -107214574 - AluSx SINE Alu 0 389 1 269 231 132 44 chr10 38375844 38375935 -107213353 - MIR3 SINE MIR -29 179 81 784 294 119 49 chr10 38376118 38376570 -107212718 + MLT1K LTR MaLR 97 580 -8 267 320 13 80 chr10 38377026 38377176 -107212112 + MIR SINE MIR 120 259 -3 1891 157 0 7 chr10 38377836 38378135 -107211153 + AluJb SINE Alu 1 297 -15 2137 93 28 7 chr10 38378136 38378427 -107210861 + AluSq SINE Alu 9 305 -8 1323 154 55 18 chr10 38379667 38379940 -107209348 + AluJo SINE Alu 4 286 -26 198 299 31 62 chr10 38379997 38380094 -107209194 - L2 LINE L2 -181 3091 2998 1494 155 81 15 chr10 38380130 38380234 -107209054 + AluJo SINE Alu 17 113 -199 189 0 0 0 chr10 38380234 38380255 -107209033 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 1494 155 81 15 chr10 38380255 38380421 -107208867 + AluJo SINE Alu 113 305 -7 2274 105 3 0 chr10 38381234 38381529 -107207759 - AluSq SINE Alu -17 296 1 1639 187 13 16 chr10 38382171 38382476 -107206812 - AluJo SINE Alu -8 304 1 396 269 69 0 chr10 38383066 38383196 -107206092 + LTR33A LTR ERVL 362 500 -23 22 0 0 0 chr10 38383395 38383417 -107205871 + AT_rich Low_complexity Low_complexity 1 22 0 447 176 24 0 chr10 38383417 38383502 -107205786 - L1MA2 LINE L1 0 6304 6218 426 267 0 0 chr10 38383503 38383604 -107205684 + L1 LINE L1 2538 2638 -3508 1385 96 5 5 chr10 38383678 38383866 -107205422 - AluY SINE Alu -21 290 103 538 149 107 17 chr10 38384993 38385142 -107204146 + L1MA5 LINE L1 5980 6139 -161 3131 141 26 8 chr10 38385144 38385641 -107203647 - L1PA15 LINE L1 -5 6160 5655 838 183 0 0 chr10 38385641 38385803 -107203485 + L1MA5A LINE L1 6134 6297 0 1812 140 24 24 chr10 38387921 38388213 -107201075 - AluJo SINE Alu -15 297 6 297 217 72 0 chr10 38388457 38388526 -107200762 - L1ME3 LINE L1 0 6162 6089 21 0 0 0 chr10 38389930 38389951 -107199337 + AT_rich Low_complexity Low_complexity 1 21 0 403 333 39 107 chr10 38389992 38390449 -107198839 + L2 LINE L2 2807 3232 -40 184 310 86 58 chr10 38392021 38392195 -107197093 - L2 LINE L2 -7 3306 3128 2200 112 0 3 chr10 38393359 38393655 -107195633 - AluSg SINE Alu -15 295 1 21 0 0 0 chr10 38394355 38394376 -107194912 + AT_rich Low_complexity Low_complexity 1 21 0 536 179 154 100 chr10 38394507 38394613 -107194675 - MER69 DNA AcHobo -7 2519 2420 647 239 31 6 chr10 38394613 38394772 -107194516 - FAM SINE Alu -12 163 1 536 179 154 100 chr10 38394772 38394905 -107194383 - MER69 DNA AcHobo -106 2420 2267 1286 279 102 7 chr10 38394917 38395369 -107193919 - MER69 DNA AcHobo -641 585 91 1940 157 15 0 chr10 38395372 38395697 -107193591 + L1PA16 LINE L1 5710 6039 -127 769 140 0 0 chr10 38395697 38395804 -107193484 + AluSp SINE Alu 1 107 -206 1133 145 28 0 chr10 38395939 38396174 -107193114 + AluSg/x SINE Alu 98 337 0 710 120 37 0 chr10 38396176 38396284 -107193004 + L1PA16 LINE L1 6046 6157 -9 568 138 0 21 chr10 38397257 38397351 -107191937 - AluSg/x SINE Alu 0 309 218 496 310 97 34 chr10 38397359 38397901 -107191387 - L1ME3A LINE L1 -333 5837 5356 1753 118 12 87 chr10 38398300 38398622 -107190666 - AluSx SINE Alu -14 298 1 22 35 0 0 chr10 38399484 38399513 -107189775 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr10 38399829 38399851 -107189437 + AT_rich Low_complexity Low_complexity 1 22 0 1950 187 24 3 chr10 38400887 38401224 -107188064 - MER2 DNA MER2_type 0 344 1 612 279 15 87 chr10 38401517 38401672 -107187616 + MIR SINE MIR 12 142 -120 2674 141 28 23 chr10 38401672 38402104 -107187184 - Tigger2a DNA MER2_type 0 434 1 612 279 15 87 chr10 38402104 38402213 -107187075 + MIR SINE MIR 142 257 -5 228 67 0 0 chr10 38402757 38402787 -107186501 + (TG)n Simple_repeat Simple_repeat 2 31 0 5061 133 69 48 chr10 38403558 38404253 -107185035 - L1MC1 LINE L1 -9 6324 5604 2194 129 3 0 chr10 38404253 38404556 -107184732 - AluSx SINE Alu -8 304 1 5061 133 69 48 chr10 38404556 38404758 -107184530 - L1MC1 LINE L1 -729 5604 5408 398 291 279 18 chr10 38404954 38405287 -107184001 - L2 LINE L2 0 3272 2853 708 296 117 0 chr10 38405490 38405713 -107183575 + MIR SINE MIR 13 261 -1 1602 149 71 29 chr10 38405734 38406015 -107183273 - AluJo SINE Alu -19 293 1 354 331 76 6 chr10 38406091 38406248 -107183040 - MIR SINE MIR -73 189 22 15613 131 39 6 chr10 38406484 38408824 -107180464 - Tigger1 DNA MER2_type 0 2418 1 2264 99 0 0 chr10 38408882 38409218 -107180070 + AluSx SINE Alu 1 336 0 1076 101 0 0 chr10 38410560 38410709 -107178579 - Tigger1 DNA MER2_type -1904 514 366 1545 218 59 35 chr10 38410724 38411005 -107178283 - MLT1C LTR MaLR 0 467 172 2111 142 0 13 chr10 38411005 38411321 -107177967 - AluSx SINE Alu 0 312 1 1545 218 59 35 chr10 38411321 38411443 -107177845 - MLT1C LTR MaLR -295 172 54 739 71 41 0 chr10 38411443 38411541 -107177747 - LTR12 LTR ERV1 -133 581 480 299 204 51 41 chr10 38411542 38411640 -107177648 - LTR30 LTR ERV1 -80 642 544 1185 132 17 77 chr10 38411644 38411879 -107177409 - LTR12 LTR ERV1 -441 273 53 258 250 0 0 chr10 38411879 38411931 -107177357 - LTR30 LTR ERV1 -670 52 1 235 100 33 150 chr10 38411933 38411993 -107177295 - MLT1B LTR MaLR -336 54 2 1736 199 66 9 chr10 38412099 38412536 -107176752 + L1 LINE L1 3132 3593 -2553 2064 198 22 3 chr10 38412680 38413038 -107176250 + MLT1A1 LTR MaLR 1 365 0 2008 135 3 35 chr10 38414102 38414244 -107175044 + AluJo SINE Alu 1 146 -166 2210 90 0 51 chr10 38414244 38414556 -107174732 + AluY SINE Alu 1 296 -15 2008 135 3 35 chr10 38414556 38414731 -107174557 + AluJo SINE Alu 146 308 -4 928 176 0 0 chr10 38416639 38416804 -107172484 + L1MA4 LINE L1 6136 6300 0 598 321 149 28 chr10 38416834 38417336 -107171952 + L2 LINE L2 372 934 -2380 492 277 125 35 chr10 38417337 38417626 -107171662 + L2 LINE L2 1152 1466 -1848 6398 113 6 1 chr10 38417626 38418505 -107170783 - THE1B-int LTR MaLR -697 883 1 2218 140 50 34 chr10 38418505 38418863 -107170425 - THE1B LTR MaLR 0 364 1 1883 173 61 6 chr10 38418966 38419308 -107169980 - MLT1A1 LTR MaLR -4 361 1 564 153 12 0 chr10 38419554 38419639 -107169649 - Tigger7 DNA MER2_type -1 2486 2401 1181 196 120 61 chr10 38419641 38419795 -107169493 + MER2 DNA MER2_type 1 145 -200 2288 130 39 33 chr10 38419795 38420157 -107169131 + THE1B LTR MaLR 1 364 0 1181 196 120 61 chr10 38420157 38420328 -107168960 + MER2 DNA MER2_type 145 345 0 855 93 0 7 chr10 38420330 38420470 -107168818 - Tigger7 DNA MER2_type -87 2400 2262 594 238 16 8 chr10 38420692 38420818 -107168470 - L2 LINE L2 -1809 1505 1379 367 300 65 102 chr10 38420906 38421166 -107168122 + L2 LINE L2 2827 3064 -208 2510 150 30 30 chr10 38421166 38421592 -107167696 + MSTB LTR MaLR 1 426 0 367 300 65 102 chr10 38421592 38421794 -107167494 + L2 LINE L2 3064 3272 0 222 279 164 49 chr10 38423975 38424219 -107165069 - L3b LINE CR1 -92 1491 1220 2108 121 0 23 chr10 38424423 38424730 -107164558 - AluSq SINE Alu -13 300 1 654 168 0 0 chr10 38424882 38424983 -107164305 + AluJ/FLAM SINE Alu 2 102 -210 373 100 0 0 chr10 38425264 38425314 -107163974 + Alu SINE Alu 1 50 -252 911 209 0 0 chr10 38425632 38425790 -107163498 + FRAM SINE Alu 1 157 -19 21 36 0 0 chr10 38425794 38425822 -107163466 + AT_rich Low_complexity Low_complexity 1 28 0 344 303 110 26 chr10 38427270 38427425 -107161863 - MIR SINE MIR -92 170 3 1887 163 0 3 chr10 38427655 38427950 -107161338 - AluJo SINE Alu -18 294 1 352 298 107 0 chr10 38429176 38429297 -107159991 - MIR3 SINE MIR -22 186 53 2203 106 19 13 chr10 38429769 38430080 -107159208 + AluSq SINE Alu 1 313 0 326 277 26 26 chr10 38432833 38432988 -107156300 - L1MC4a LINE L1 -1845 5963 5809 778 312 70 19 chr10 38433347 38433876 -107155412 - HAL1 LINE L1 -794 1713 1158 450 248 9 18 chr10 38433875 38433990 -107155298 + L2 LINE L2 3192 3305 -8 * 528 223 100 92 chr10 38433996 38434247 -107155041 - HAL1 LINE L1 -1351 1156 904 287 288 14 50 chr10 38434257 38434396 -107154892 - HAL1 LINE L1 -1714 793 660 25 51 0 0 chr10 38435347 38435386 -107153902 + AT_rich Low_complexity Low_complexity 1 39 0 276 270 200 0 chr10 38435386 38435586 -107153702 - L1ME4a LINE L1 -1 6120 5881 2071 106 3 43 chr10 38435601 38435923 -107153365 + AluSc SINE Alu 1 309 0 261 301 52 23 chr10 38436042 38436215 -107153073 - L1ME4a LINE L1 -1018 5128 4951 962 150 6 6 chr10 38436415 38436575 -107152713 - FRAM SINE Alu -9 167 8 223 315 43 11 chr10 38436778 38436870 -107152418 + MIR SINE MIR 58 152 -110 2015 98 98 0 chr10 38437185 38437462 -107151826 + AluSx SINE Alu 1 304 -8 876 215 0 0 chr10 38438026 38438184 -107151104 + AluJb SINE Alu 137 294 -18 552 179 0 0 chr10 38438216 38438328 -107150960 + GA-rich Low_complexity Low_complexity 3 114 0 359 330 17 0 chr10 38438638 38438773 -107150515 + MIR SINE MIR 21 157 -68 635 274 74 16 chr10 38438930 38439120 -107150168 + MIR SINE MIR 41 241 -21 471 302 124 70 chr10 38439473 38439853 -107149435 + L2 LINE L2 1798 2221 -1093 1188 220 5 0 chr10 38439853 38440071 -107149217 - MER58A DNA MER1_type -3 221 3 471 302 124 70 chr10 38440071 38440272 -107149016 + L2 LINE L2 2221 2410 -904 454 271 82 0 chr10 38440334 38440456 -107148832 + MIR SINE MIR 25 156 -106 543 325 94 39 chr10 38440516 38440984 -107148304 + L2 LINE L2 2467 2960 -354 446 271 28 0 chr10 38441955 38442062 -107147226 - L2 LINE L2 0 3313 3204 951 154 0 146 chr10 38442124 38442364 -107146924 - MER3 DNA MER1_type -4 205 1 872 159 8 0 chr10 38442977 38443109 -107146179 + FLAM_C SINE Alu 1 133 0 323 231 160 59 chr10 38443347 38443516 -107145772 + MIR3 SINE MIR 13 198 -10 2948 98 0 3 chr10 38443740 38444116 -107145172 + THE1C LTR MaLR 1 375 0 1560 185 0 38 chr10 38444365 38444684 -107144604 - AluJo SINE Alu -5 307 1 426 251 11 6 chr10 38445586 38445761 -107143527 + (CA)n Simple_repeat Simple_repeat 2 177 0 450 0 0 0 chr10 38445890 38445940 -107143348 + (TG)n Simple_repeat Simple_repeat 1 50 0 407 59 0 0 chr10 38446840 38446891 -107142397 - MADE1 DNA Mariner -5 75 25 4239 36 2 0 chr10 38446891 38447386 -107141902 - L1PA5 LINE L1 -1704 4442 3947 8292 37 1 1 chr10 38447386 38449101 -107140187 + L1PA5 LINE L1 4439 6154 0 327 50 0 0 chr10 38449101 38449141 -107140147 - MADE1 DNA Mariner -40 40 1 1979 161 34 10 chr10 38449648 38450058 -107139230 - L1 LINE L1 -1481 4665 4246 239 356 150 28 chr10 38450154 38450401 -107138887 - L2 LINE L2 -3 3269 2993 849 167 0 0 chr10 38450596 38450809 -107138479 + (TG)n Simple_repeat Simple_repeat 1 213 0 404 315 5 79 chr10 38452092 38452308 -107136980 - MIR SINE MIR -43 219 20 224 235 15 73 chr10 38453578 38453646 -107135642 - L2 LINE L2 -1 3271 3208 1501 188 21 73 chr10 38453754 38454190 -107135098 + MLT1F LTR MaLR 130 542 0 205 353 66 22 chr10 38454197 38454333 -107134955 - L2 LINE L2 -31 3282 3141 243 273 63 77 chr10 38454770 38454913 -107134375 - L2 LINE L2 -9 3304 3164 686 228 76 84 chr10 38454979 38455242 -107134046 - MIR SINE MIR 0 262 2 1953 160 13 0 chr10 38455431 38455731 -107133557 + AluJo SINE Alu 1 304 -8 236 221 70 35 chr10 38455915 38456001 -107133287 + MIR SINE MIR 45 133 -75 22 56 0 0 chr10 38456790 38456826 -107132462 + AT_rich Low_complexity Low_complexity 1 36 0 2174 152 33 30 chr10 38456848 38457211 -107132077 - THE1B LTR MaLR 0 364 1 299 339 36 18 chr10 38457264 38457376 -107131912 - L2 LINE L2 -21 3251 3138 2441 118 113 13 chr10 38457540 38457929 -107131359 - MSTA LTR MaLR 0 428 1 317 268 29 80 chr10 38459806 38459944 -107129344 - MIR SINE MIR -113 149 19 318 343 57 11 chr10 38460614 38460789 -107128499 - MIR SINE MIR -53 209 27 360 0 0 0 chr10 38460811 38460851 -107128437 + (TTCC)n Simple_repeat Simple_repeat 1 40 0 1149 69 29 0 chr10 38460851 38461026 -107128262 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 345 160 11 32 chr10 38461029 38461123 -107128165 + CT-rich Low_complexity Low_complexity 1 92 0 824 182 0 0 chr10 38461123 38461255 -107128033 - FRAM SINE Alu -25 151 20 337 177 23 0 chr10 38461267 38461346 -107127942 - L1P4 LINE L1 -370 5781 5698 470 295 60 7 chr10 38461929 38462078 -107127210 - MER69A DNA AcHobo -19 158 2 22 0 0 0 chr10 38462637 38462659 -107126629 + AT_rich Low_complexity Low_complexity 1 22 0 1445 158 0 0 chr10 38462721 38462936 -107126352 - AluSg/x SINE Alu -13 297 83 3234 161 19 3 chr10 38462936 38463500 -107125788 - L1MB3 LINE L1 -32 6151 5579 2154 152 128 8 chr10 38463568 38463950 -107125338 - MSTA LTR MaLR 0 428 1 204 111 0 0 chr10 38464170 38464206 -107125082 + (T)n Simple_repeat Simple_repeat 1 36 0 39 0 0 0 chr10 38464496 38464535 -107124753 + AT_rich Low_complexity Low_complexity 1 39 0 1526 196 7 0 chr10 38464538 38464818 -107124470 - AluJo SINE Alu -30 282 1 1341 203 3 38 chr10 38465159 38465280 -107124008 + AluJo SINE Alu 2 126 -186 2314 86 0 3 chr10 38465280 38465572 -107123716 - AluSc SINE Alu -18 291 1 1341 203 3 38 chr10 38465572 38465740 -107123548 + AluJo SINE Alu 126 281 -31 186 354 50 62 chr10 38467157 38467222 -107122066 + MIR SINE MIR 34 98 -164 1488 169 9 91 chr10 38467222 38467396 -107121892 - AluJo SINE Alu -18 294 156 2213 132 0 0 chr10 38467396 38467692 -107121596 - AluSq SINE Alu -17 296 1 1488 169 9 91 chr10 38467692 38467837 -107121451 - AluJo SINE Alu -156 156 1 186 354 50 62 chr10 38467837 38467932 -107121356 + MIR SINE MIR 98 192 -70 487 320 91 67 chr10 38468278 38468412 -107120876 - L2 LINE L2 -11 3302 3173 2261 127 0 0 chr10 38468412 38468719 -107120569 + AluSx SINE Alu 1 307 -5 487 320 91 67 chr10 38468719 38468956 -107120332 - L2 LINE L2 -140 3173 2922 966 180 0 0 chr10 38469991 38470152 -107119136 - FRAM SINE Alu -12 164 4 5802 119 23 11 chr10 38470152 38471697 -107117591 - L1MA3 LINE L1 -157 6148 4585 375 230 0 8 chr10 38471768 38471860 -107117428 + L1MC1 LINE L1 5678 5765 -356 8223 230 23 6 chr10 38471887 38473857 -107115431 - L1M4 LINE L1 -1069 5077 3074 30 27 0 0 chr10 38473874 38473911 -107115377 + AT_rich Low_complexity Low_complexity 1 37 0 260 172 0 47 chr10 38473917 38473981 -107115307 + L1MC1 LINE L1 5958 6018 -315 * 2484 159 43 50 chr10 38473973 38474645 -107114643 - L1MCa LINE L1 -4589 1837 1087 563 223 41 99 chr10 38474652 38474944 -107114344 + L1MC5 LINE L1 7657 7931 -30 250 277 96 12 chr10 38475867 38475950 -107113338 + MIR SINE MIR 3 92 -170 1154 174 28 9 chr10 38475996 38476208 -107113080 - Tigger1 DNA MER2_type -1 2417 2202 813 190 0 21 chr10 38476190 38476332 -107112956 - Tigger1 DNA MER2_type -2256 162 24 * 1395 176 0 62 chr10 38476341 38476647 -107112641 - L1MA7 LINE L1 -32 6259 5973 250 318 205 0 chr10 38476648 38476799 -107112489 + MIR SINE MIR 78 259 -3 1544 171 16 68 chr10 38476926 38477099 -107112189 - AluJo SINE Alu -7 305 155 2283 110 3 0 chr10 38477099 38477398 -107111890 - AluSx SINE Alu -12 300 1 1544 171 16 68 chr10 38477398 38477546 -107111742 - AluJo SINE Alu -157 155 1 2259 115 0 0 chr10 38477550 38477866 -107111422 - AluSx SINE Alu 0 316 1 229 276 181 9 chr10 38477886 38478002 -107111286 + L2 LINE L2 3178 3313 0 186 103 0 0 chr10 38480869 38480898 -107108390 + (T)n Simple_repeat Simple_repeat 1 29 0 294 287 223 25 chr10 38481814 38482016 -107107272 + L3 LINE CR1 517 758 -819 337 321 113 13 chr10 38482157 38482316 -107106972 + MIR SINE MIR 46 220 -42 619 193 37 0 chr10 38482400 38482535 -107106753 + FLAM_C SINE Alu 7 145 0 427 357 67 20 chr10 38482594 38482950 -107106338 + L3 LINE CR1 829 1201 -376 210 37 0 0 chr10 38483000 38483027 -107106261 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1287 146 0 119 chr10 38483036 38483304 -107105984 - AluJb SINE Alu -48 264 29 1878 224 43 14 chr10 38483345 38483831 -107105457 - MER74B LTR ERVL -67 555 56 369 311 105 31 chr10 38483844 38484101 -107105187 + L3 LINE CR1 1301 1576 -1 189 0 0 0 chr10 38484517 38484538 -107104750 + (T)n Simple_repeat Simple_repeat 1 21 0 324 239 11 23 chr10 38484632 38484720 -107104568 + MIR3 SINE MIR 119 205 -3 224 333 62 0 chr10 38484864 38484945 -107104343 - MIR SINE MIR -118 144 59 2352 88 0 22 chr10 38485363 38485681 -107103607 - AluY SINE Alu 0 311 1 991 168 0 0 chr10 38485701 38485862 -107103426 - L1MA3 LINE L1 -4 6301 6141 538 260 13 27 chr10 38486681 38486831 -107102457 + MIR SINE MIR 115 262 0 238 284 0 0 chr10 38486980 38487054 -107102234 + (TG)n Simple_repeat Simple_repeat 2 75 0 466 258 13 0 chr10 38487506 38487665 -107101623 + CT-rich Low_complexity Low_complexity 3 163 0 402 337 72 66 chr10 38487693 38488028 -107101260 - L2 LINE L2 -17 3255 2919 467 250 108 56 chr10 38488260 38488668 -107100620 - L1MDa LINE L1 -915 5625 5197 338 281 117 39 chr10 38488742 38489126 -107100162 - L1MDa LINE L1 -1460 5080 4667 2513 258 45 49 chr10 38489162 38490099 -107099189 + L1ME LINE L1 6 938 -5132 43695 34 22 1 chr10 38490139 38496166 -107093122 + L1PA3 LINE L1 1 6155 0 1458 267 53 64 chr10 38496160 38496358 -107092930 + L1ME LINE L1 968 1167 -5094 * 1711 166 53 3 chr10 38496358 38496642 -107092646 + AluJb SINE Alu 2 299 -13 1458 267 53 64 chr10 38496642 38497345 -107091943 + L1ME LINE L1 1167 1859 -4402 760 270 70 90 chr10 38497372 38497639 -107091649 - L1MDa LINE L1 -1899 4641 4370 5406 45 0 2 chr10 38497639 38498286 -107091002 + L1PA5 LINE L1 5522 6167 0 760 270 70 90 chr10 38498286 38498351 -107090937 - L1MDa LINE L1 -2170 4370 4305 2447 88 0 0 chr10 38498351 38498659 -107090629 - AluSx SINE Alu -4 308 1 760 270 70 90 chr10 38498659 38499165 -107090123 - L1MDa LINE L1 -2235 4305 3818 868 82 8 0 chr10 38499165 38499287 -107090001 + MSTA LTR MaLR 1 123 -305 526 291 113 25 chr10 38499327 38500042 -107089246 - L1MDa LINE L1 -2719 3821 3044 402 206 61 92 chr10 38500150 38500288 -107089000 - L1MDa LINE L1 -3794 2746 2605 216 0 0 0 chr10 38500288 38500312 -107088976 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1481 173 11 29 chr10 38500315 38500593 -107088695 - AluJo SINE Alu -31 281 9 402 206 61 92 chr10 38500593 38500678 -107088610 - L1MDa LINE L1 -3937 2603 2526 2180 142 0 0 chr10 38500702 38501013 -107088275 - AluSx SINE Alu -1 311 1 860 275 82 46 chr10 38501427 38501888 -107087400 - L1MDa LINE L1 -892 2009 1585 180 278 19 0 chr10 38502881 38502935 -107086353 - L2 LINE L2 -573 2741 2687 1695 172 14 10 chr10 38502935 38503232 -107086056 + AluJo SINE Alu 1 298 -14 462 36 0 0 chr10 38503635 38503691 -107085597 + (GGAA)n Simple_repeat Simple_repeat 1 56 0 3063 80 3 0 chr10 38504990 38505353 -107083935 + THE1B LTR MaLR 1 364 0 189 147 88 0 chr10 38507410 38507444 -107081844 - L2 LINE L2 -13 3300 3264 * 387 219 130 16 chr10 38507418 38507541 -107081747 - MIR SINE MIR -15 247 111 409 189 154 35 chr10 38508115 38508258 -107081030 + L2 LINE L2 3108 3267 -46 329 171 0 14 chr10 38508276 38508346 -107080942 + (TG)n Simple_repeat Simple_repeat 2 70 0 2050 161 0 0 chr10 38508385 38508689 -107080599 - AluSq SINE Alu -9 304 1 1749 145 17 14 chr10 38508759 38509049 -107080239 + MER47A DNA MER2_type 76 366 0 227 359 0 0 chr10 38509491 38509619 -107079669 - L1M4 LINE L1 -3072 3074 2947 1114 140 11 0 chr10 38509622 38509808 -107079480 - L1MA5 LINE L1 -1 6299 6112 2292 107 0 19 chr10 38509810 38510119 -107079169 + AluSq SINE Alu 1 303 -10 4777 89 5 2 chr10 38510131 38510381 -107078907 + L1PB1 LINE L1 5531 5779 -372 234 0 0 0 chr10 38510381 38510407 -107078881 + (TA)n Simple_repeat Simple_repeat 1 26 0 4777 89 5 2 chr10 38510407 38510773 -107078515 + L1PB1 LINE L1 5779 6149 -2 337 285 81 99 chr10 38510814 38511260 -107078028 - L1M4 LINE L1 -3169 2977 2540 1684 188 3 26 chr10 38512266 38512574 -107076714 + AluJo SINE Alu 5 305 -7 1928 143 4 0 chr10 38513175 38513499 -107075789 + AluSx SINE Alu 1 325 0 216 122 0 0 chr10 38513696 38513737 -107075551 + (CAGAGA)n Simple_repeat Simple_repeat 2 42 0 473 277 150 27 chr10 38513911 38514341 -107074947 - LTR33 LTR ERVL -19 502 1 217 334 93 72 chr10 38514517 38514894 -107074394 + L2 LINE L2 2807 3191 -81 207 304 80 9 chr10 38516736 38516848 -107072440 + MIR SINE MIR 46 165 -97 267 349 48 24 chr10 38516942 38517068 -107072220 + MIR SINE MIR 16 144 -64 1215 190 5 0 chr10 38517235 38517446 -107071842 - L1PA16 LINE L1 -9 6157 5946 737 211 0 0 chr10 38517448 38517576 -107071712 - FLAM_A SINE Alu -5 128 1 323 228 69 10 chr10 38517588 38517689 -107071599 - MIR SINE MIR -74 188 82 234 62 0 0 chr10 38518192 38518224 -107071064 + (TTTA)n Simple_repeat Simple_repeat 4 35 0 3220 190 34 19 chr10 38519251 38519872 -107069416 - LTR27 LTR ERV1 0 636 7 203 242 16 16 chr10 38520383 38520445 -107068843 + T-rich Low_complexity Low_complexity 2 63 0 247 308 176 22 chr10 38520665 38520892 -107068396 - MIR SINE MIR 0 262 1 653 219 163 0 chr10 38520901 38521061 -107068227 - MER5A DNA MER1_type -3 186 1 180 0 0 0 chr10 38524397 38524417 -107064871 + (A)n Simple_repeat Simple_repeat 1 20 0 189 0 0 0 chr10 38524417 38524438 -107064850 + (TA)n Simple_repeat Simple_repeat 2 22 0 2468 82 3 0 chr10 38524803 38525108 -107064180 + AluSp SINE Alu 1 306 -7 5933 142 18 2 chr10 38525263 38526335 -107062953 + L1PA13 LINE L1 5048 6161 -2 833 204 42 103 chr10 38526337 38526667 -107062621 + L1ME1 LINE L1 5877 6164 0 22 35 0 0 chr10 38526667 38526696 -107062592 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr10 38526708 38526729 -107062559 + AT_rich Low_complexity Low_complexity 1 21 0 1890 109 109 0 chr10 38528154 38528430 -107060858 - AluSx SINE Alu -6 306 1 251 309 43 68 chr10 38528527 38528689 -107060599 + MIR SINE MIR 28 185 -77 291 85 0 0 chr10 38529638 38529685 -107059603 + (TG)n Simple_repeat Simple_repeat 2 48 0 2188 101 14 0 chr10 38529685 38529972 -107059316 - AluSp SINE Alu -22 291 1 2452 79 0 0 chr10 38530913 38531216 -107058072 - AluY SINE Alu -7 304 2 4232 93 21 5 chr10 38531222 38531802 -107057486 - L1MA3 LINE L1 -2 6303 5715 360 0 0 0 chr10 38532033 38532073 -107057215 + (TG)n Simple_repeat Simple_repeat 2 41 0 183 345 71 9 chr10 38532780 38532893 -107056395 - MIR SINE MIR -64 144 25 294 250 250 7 chr10 38532928 38533068 -107056220 + MIR SINE MIR 1 174 -88 615 258 19 6 chr10 38533105 38533264 -107056024 - MIR SINE MIR 0 262 102 2460 86 0 0 chr10 38533373 38533676 -107055612 + AluSx SINE Alu 1 303 -9 894 221 7 0 chr10 38535588 38535742 -107053546 - FRAM SINE Alu -11 155 1 193 218 0 184 chr10 38535777 38535825 -107053463 + L2 LINE L2 3243 3270 -43 687 250 113 79 chr10 38535825 38536357 -107052931 - MLT1H1 LTR MaLR -4 551 2 193 218 0 184 chr10 38536357 38536395 -107052893 + L2 LINE L2 3270 3313 0 3936 135 75 26 chr10 38536910 38537563 -107051725 - L1PA14 LINE L1 -12 6149 5465 375 307 105 66 chr10 38538052 38538654 -107050634 - L2 LINE L2 -337 2977 2353 1752 126 24 37 chr10 38538660 38538954 -107050334 + AluJo SINE Alu 1 290 -22 183 236 303 0 chr10 38539152 38539241 -107050047 + MER5A DNA MER1_type 45 160 -29 305 251 105 55 chr10 38541639 38541929 -107047359 - L1ME LINE L1 -425 5696 5385 397 288 71 41 chr10 38542063 38542456 -107046832 - L1ME LINE L1 -962 5184 4780 189 313 0 0 chr10 38542824 38542872 -107046416 - L2 LINE L2 -16 3256 3209 360 309 112 20 chr10 38543081 38543233 -107046055 + MIR3 SINE MIR 40 205 -3 229 196 36 45 chr10 38543522 38543634 -107045654 + (TATAA)n Simple_repeat Simple_repeat 3 113 0 221 191 0 0 chr10 38543712 38543754 -107045534 - MIR SINE MIR -108 154 113 27 0 0 0 chr10 38545097 38545124 -107044164 + AT_rich Low_complexity Low_complexity 1 27 0 3904 193 69 28 chr10 38545142 38546114 -107043174 - L1MC3 LINE L1 -16 7769 6733 350 284 47 24 chr10 38547103 38547230 -107042058 + MIR3 SINE MIR 51 180 -28 361 360 52 0 chr10 38547738 38547874 -107041414 - MIR3 SINE MIR -28 180 38 216 354 38 0 chr10 38547920 38547999 -107041289 + L2 LINE L2 3191 3272 -41 530 321 19 71 chr10 38548103 38548411 -107040877 - L2 LINE L2 -3 3269 2978 2150 130 0 0 chr10 38548857 38549150 -107040138 + AluSx SINE Alu 1 293 -19 233 329 31 31 chr10 38549602 38549763 -107039525 - L2 LINE L2 -783 2531 2371 2028 134 3 16 chr10 38549909 38550216 -107039072 - AluSq SINE Alu -10 303 1 235 284 181 0 chr10 38550280 38550396 -107038892 - MIR3 SINE MIR -30 178 42 1411 185 4 36 chr10 38552097 38552373 -107036915 - AluJb SINE Alu -25 287 21 700 200 33 0 chr10 38552391 38552511 -107036777 - FLAM_C SINE Alu -9 124 1 31 44 0 0 chr10 38554021 38554066 -107035222 + AT_rich Low_complexity Low_complexity 1 45 0 238 354 83 21 chr10 38554187 38554331 -107034957 - MIR SINE MIR -90 172 20 206 206 16 0 chr10 38555038 38555101 -107034187 + (TG)n Simple_repeat Simple_repeat 2 65 0 186 289 44 0 chr10 38555942 38555987 -107033301 - MIR SINE MIR -126 82 36 1890 128 30 0 chr10 38559143 38559409 -107029879 + AluSx SINE Alu 17 290 -22 333 303 121 0 chr10 38560614 38560746 -107028542 - L2 LINE L2 -7 3265 3118 937 219 11 22 chr10 38560794 38560972 -107028316 + MER45A DNA AcHobo 1 176 -2 5756 79 32 0 chr10 38561273 38562049 -107027239 - L1PA11 LINE L1 -1 6173 5373 532 290 52 26 chr10 38562049 38562280 -107027008 - L2 LINE L2 -27 3286 3050 514 185 0 0 chr10 38562419 38562500 -107026788 + AluJ/FLAM SINE Alu 2 82 -230 54 68 0 0 chr10 38563011 38563114 -107026174 + AT_rich Low_complexity Low_complexity 1 103 0 2175 113 0 3 chr10 38563550 38563852 -107025436 - AluSq SINE Alu -12 301 1 224 219 0 0 chr10 38567382 38567423 -107021865 + CT-rich Low_complexity Low_complexity 6 46 0 1837 219 27 3 chr10 38567879 38568254 -107021034 - MLT1B LTR MaLR -6 384 1 256 346 19 9 chr10 38568400 38568507 -107020781 + MER5A DNA MER1_type 79 186 -3 393 328 78 47 chr10 38568594 38569079 -107020209 + L2 LINE L2 2257 2756 -558 183 247 86 32 chr10 38569115 38569208 -107020080 - MER5A DNA MER1_type -24 165 68 207 344 131 0 chr10 38569401 38569523 -107019765 + L2 LINE L2 2943 3080 -192 213 238 0 0 chr10 38569633 38569675 -107019613 + L2 LINE L2 3270 3311 -2 1468 207 7 13 chr10 38569928 38570227 -107019061 + AluJo SINE Alu 3 299 -13 1121 246 36 71 chr10 38570304 38570799 -107018489 + MLT1H LTR MaLR 72 549 0 347 366 57 18 chr10 38571884 38572111 -107017177 + MIR SINE MIR 7 242 -20 1739 160 20 10 chr10 38574043 38574343 -107014945 + AluJb SINE Alu 1 303 -9 2095 122 3 3 chr10 38574957 38575244 -107014044 - AluSq SINE Alu -26 287 1 4970 137 3 20 chr10 38575512 38576133 -107013155 + L1PA16 LINE L1 5420 6027 -139 2310 100 0 3 chr10 38576133 38576433 -107012855 + AluSx SINE Alu 1 299 -13 4970 137 3 20 chr10 38576433 38576565 -107012723 + L1PA16 LINE L1 6027 6160 -6 797 242 21 0 chr10 38576574 38576764 -107012524 - MER20 DNA MER1_type -3 216 23 1503 151 0 46 chr10 38576870 38576996 -107012292 + L1PA16 LINE L1 5914 6023 -143 2251 107 0 3 chr10 38576996 38577296 -107011992 + AluSx SINE Alu 1 299 -13 1503 151 0 46 chr10 38577296 38577428 -107011860 + L1PA16 LINE L1 6023 6160 -6 1006 245 14 0 chr10 38577437 38577649 -107011639 - MER20 DNA MER1_type -3 216 2 22 0 0 0 chr10 38577955 38577977 -107011311 + AT_rich Low_complexity Low_complexity 1 22 0 204 322 78 92 chr10 38578449 38578732 -107010556 + L2 LINE L2 2924 3202 -70 1727 157 14 17 chr10 38580223 38580516 -107008772 - AluJo SINE Alu -20 292 1 199 333 207 30 chr10 38580880 38581015 -107008273 + L2 LINE L2 3114 3272 0 216 111 0 0 chr10 38581704 38581740 -107007548 + (CA)n Simple_repeat Simple_repeat 2 37 0 180 231 0 0 chr10 38583862 38583940 -107005348 + (TA)n Simple_repeat Simple_repeat 2 79 0 1645 176 11 0 chr10 38583960 38584232 -107005056 - AluJb SINE Alu -37 275 1 876 234 46 0 chr10 38584366 38584563 -107004725 + MIR SINE MIR 3 208 -54 569 187 16 41 chr10 38585775 38585898 -107003390 + MER45A DNA AcHobo 54 173 -5 21 0 0 0 chr10 38586854 38586875 -107002413 + AT_rich Low_complexity Low_complexity 1 21 0 2089 121 0 7 chr10 38587129 38587419 -107001869 - AluSx SINE Alu -24 288 1 666 230 29 35 chr10 38587596 38587770 -107001518 + MER5B DNA MER1_type 1 173 -5 334 296 72 16 chr10 38587785 38587910 -107001378 - MER5A DNA MER1_type 0 189 58 306 367 47 33 chr10 38588196 38588558 -107000730 - L2 LINE L2 -1906 1408 1042 2953 133 4 0 chr10 38588930 38589380 -106999908 - L1PA16 LINE L1 -9 6157 5706 2100 114 24 0 chr10 38590006 38590126 -106999162 + AluSx SINE Alu 4 120 -192 387 0 0 0 chr10 38590126 38590169 -106999119 + (CA)n Simple_repeat Simple_repeat 2 44 0 2100 114 24 0 chr10 38590169 38590338 -106998950 + AluSx SINE Alu 120 300 -12 277 319 101 0 chr10 38590582 38590701 -106998587 + L2 LINE L2 3142 3272 0 21 0 0 0 chr10 38591441 38591462 -106997826 + AT_rich Low_complexity Low_complexity 1 21 0 466 91 26 0 chr10 38592131 38592208 -106997080 + (TTCC)n Simple_repeat Simple_repeat 4 82 0 232 352 93 62 chr10 38592404 38592597 -106996691 - L2 LINE L2 -6 3266 3068 429 287 12 57 chr10 38594701 38594948 -106994340 + MER106A DNA MER1_type 1 236 0 1772 111 100 7 chr10 38594957 38595227 -106994061 + AluSx SINE Alu 7 301 -11 24 53 0 0 chr10 38595815 38595853 -106993435 + AT_rich Low_complexity Low_complexity 1 38 0 8622 153 106 67 chr10 38596405 38597175 -106992113 + L1MCa LINE L1 7 745 -5681 1680 186 0 21 chr10 38597175 38597460 -106991828 - AluJo SINE Alu -33 279 1 8622 153 106 67 chr10 38597460 38598440 -106990848 + L1MCa LINE L1 745 1874 -4552 5685 37 0 0 chr10 38598440 38599117 -106990171 + L1PA4 LINE L1 5474 6150 -5 8622 153 106 67 chr10 38599117 38599689 -106989599 + L1MCa LINE L1 1874 2422 -4004 1388 197 25 6 chr10 38599685 38600050 -106989238 + L1MCa LINE L1 3123 3494 -2932 * 4681 223 64 9 chr10 38600053 38601943 -106987345 + L1MCa LINE L1 3910 5911 -702 859 273 78 6 chr10 38601959 38602307 -106986981 + MLT1C LTR MaLR 83 455 -12 528 262 77 22 chr10 38602333 38602516 -106986772 + MIR SINE MIR 23 215 -47 2323 161 29 7 chr10 38602811 38603220 -106986068 + MSTB LTR MaLR 1 418 -8 198 0 0 0 chr10 38604006 38604028 -106985260 + (A)n Simple_repeat Simple_repeat 1 22 0 2567 168 17 0 chr10 38604269 38604687 -106984601 - MSTB LTR MaLR 0 426 2 285 242 42 21 chr10 38606691 38606786 -106982502 + CT-rich Low_complexity Low_complexity 4 100 0 752 276 5 23 chr10 38607408 38607625 -106981663 - Charlie1 DNA MER1_type -2542 219 7 345 302 18 12 chr10 38607824 38607993 -106981295 + CT-rich Low_complexity Low_complexity 1 170 0 266 296 80 63 chr10 38608129 38608297 -106980991 - L1M4 LINE L1 -2979 3167 3003 3136 149 0 13 chr10 38608297 38608826 -106980462 - L1PA16 LINE L1 0 6166 5645 266 296 80 63 chr10 38608826 38609417 -106979871 - L1M4 LINE L1 -3143 3003 2395 5571 236 75 34 chr10 38610078 38610734 -106978554 - L1ME1 LINE L1 -5 6230 5602 1139 261 4 0 chr10 38610734 38610972 -106978316 + MER8 DNA MER2_type 1 239 0 5571 236 75 34 chr10 38610972 38613589 -106975699 - L1ME1 LINE L1 -633 5602 2835 439 275 79 4 chr10 38613594 38613823 -106975465 - L1ME1 LINE L1 -3698 2517 2272 180 0 0 0 chr10 38613830 38613850 -106975438 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 2864 72 0 0 chr10 38613850 38614237 -106975051 - L1PA8 LINE L1 -24 6148 5762 243 259 12 0 chr10 38614255 38614340 -106974948 - L1ME1 LINE L1 -4085 2311 2226 269 286 19 67 chr10 38614345 38614450 -106974838 + MIR SINE MIR 163 262 0 338 57 19 0 chr10 38615301 38615354 -106973934 + (TA)n Simple_repeat Simple_repeat 1 54 0 688 157 0 98 chr10 38616332 38616485 -106972803 + FLAM_C SINE Alu 5 142 -1 900 196 0 0 chr10 38616512 38616655 -106972633 + AluJb SINE Alu 140 282 -30 216 0 0 0 chr10 38616659 38616683 -106972605 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 396 219 23 0 chr10 38618273 38618401 -106970887 + (TG)n Simple_repeat Simple_repeat 1 131 0 180 237 129 54 chr10 38619048 38619141 -106970147 + MIR3 SINE MIR 12 111 -97 237 193 67 118 chr10 38619335 38619454 -106969834 - MER94 DNA DNA -15 119 7 21 36 0 0 chr10 38620500 38620528 -106968760 + AT_rich Low_complexity Low_complexity 1 28 0 185 339 42 73 chr10 38620631 38620823 -106968465 - L2 LINE L2 -358 2956 2771 707 194 58 7 chr10 38621306 38621461 -106967827 - MIR SINE MIR -10 252 90 696 219 0 0 chr10 38622138 38622257 -106967031 - FLAM_A SINE Alu -17 125 7 428 308 7 87 chr10 38622280 38622569 -106966719 + L1MC4a LINE L1 2061 2326 -4070 347 299 61 15 chr10 38622630 38622827 -106966461 + L1MC4a LINE L1 3772 3977 -2238 285 267 136 23 chr10 38623136 38623312 -106965976 + L1MC4a LINE L1 5778 5973 -1904 371 178 0 0 chr10 38623648 38623721 -106965567 - AluJ/FLAM SINE Alu -225 77 5 1729 157 16 42 chr10 38624752 38625058 -106964230 - AluJo SINE Alu -13 299 2 227 356 20 94 chr10 38625079 38625228 -106964060 + L2 LINE L2 3127 3264 -8 1787 177 0 10 chr10 38625364 38625669 -106963619 - AluJo SINE Alu -9 303 2 276 270 106 74 chr10 38625782 38625971 -106963317 - L3b LINE CR1 -119 1464 1270 735 147 7 44 chr10 38626913 38627049 -106962239 - FLAM_C SINE Alu -10 133 3 543 301 38 60 chr10 38627164 38627430 -106961858 - MIR SINE MIR 0 262 3 1573 199 145 43 chr10 38628318 38628786 -106960502 - MLT2B1 LTR ERVL -2 518 3 759 175 32 0 chr10 38628881 38629007 -106960281 + FLAM_C SINE Alu 1 130 -3 2120 99 0 13 chr10 38629142 38629444 -106959844 - AluY SINE Alu -13 298 1 181 383 78 0 chr10 38630025 38630153 -106959135 - L2 LINE L2 -220 3052 2915 4647 189 46 57 chr10 38630222 38630850 -106958438 - Charlie1a DNA MER1_type -1308 1453 820 1648 169 10 24 chr10 38630850 38631145 -106958143 + AluJo SINE Alu 1 291 -21 4647 189 46 57 chr10 38631145 38631918 -106957370 - Charlie1a DNA MER1_type -1941 820 1 1795 142 0 0 chr10 38631935 38632181 -106957107 + AluSx SINE Alu 46 291 -21 487 200 148 7 chr10 38632189 38632344 -106956944 - MIR SINE MIR -21 241 65 2443 123 72 29 chr10 38632787 38633201 -106956087 + MSTB1 LTR MaLR 1 432 0 2260 151 29 39 chr10 38634005 38634382 -106954906 + MLT2D LTR ERVL 1 375 -39 333 0 0 0 chr10 38634382 38634419 -106954869 + (TG)n Simple_repeat Simple_repeat 2 38 0 2260 151 29 39 chr10 38634419 38634457 -106954831 + MLT2D LTR ERVL 375 412 -2 486 246 46 8 chr10 38634578 38634708 -106954580 + MER5B DNA MER1_type 1 135 -43 189 0 0 0 chr10 38635168 38635189 -106954099 + (A)n Simple_repeat Simple_repeat 1 21 0 189 0 0 0 chr10 38636712 38636733 -106952555 + (T)n Simple_repeat Simple_repeat 1 21 0 189 0 0 0 chr10 38636791 38636812 -106952476 + (TG)n Simple_repeat Simple_repeat 2 22 0 522 284 157 18 chr10 38636819 38637207 -106952081 + L1ME4a LINE L1 5678 6119 -2 198 315 101 0 chr10 38637319 38637408 -106951880 - L2 LINE L2 0 3272 3175 3200 119 0 39 chr10 38637559 38638095 -106951193 + L1PB1 LINE L1 5637 6151 0 959 277 53 13 chr10 38638504 38638880 -106950408 - L1MD2 LINE L1 -12 6347 5957 1397 105 0 0 chr10 38638958 38639139 -106950149 - AluSq SINE Alu -8 305 125 210 277 42 67 chr10 38639202 38639321 -106949967 - L2 LINE L2 -569 2745 2630 196 154 39 0 chr10 38639361 38639413 -106949875 + CT-rich Low_complexity Low_complexity 4 57 0 24 32 0 0 chr10 38640343 38640374 -106948914 + AT_rich Low_complexity Low_complexity 1 31 0 37625 34 1 1 chr10 38640400 38645929 -106943359 - L1PA4 LINE L1 -3 6152 623 693 69 0 0 chr10 38645927 38646014 -106943274 - L1PA4 LINE L1 -6048 98 12 * 387 41 0 0 chr10 38648088 38648137 -106941151 + (TG)n Simple_repeat Simple_repeat 1 49 0 27 0 0 0 chr10 38648387 38648414 -106940874 + AT_rich Low_complexity Low_complexity 1 27 0 2300 96 20 0 chr10 38648655 38648958 -106940330 - AluSx SINE Alu -3 309 1 2081 102 34 57 chr10 38649272 38649656 -106939632 + THE1C LTR MaLR 1 375 0 29 47 0 0 chr10 38650248 38650291 -106938997 + AT_rich Low_complexity Low_complexity 1 43 0 1732 162 46 15 chr10 38651430 38651757 -106937531 + MER1B DNA MER1_type 1 337 0 767 234 129 10 chr10 38652456 38652665 -106936623 - MIR SINE MIR 0 262 29 1385 175 6 127 chr10 38654121 38654459 -106934829 - AluJb SINE Alu -15 297 1 331 369 157 10 chr10 38654753 38654951 -106934337 + MIR SINE MIR 36 262 0 1513 234 151 41 chr10 38654959 38655468 -106933820 + MLT1F1 LTR MaLR 3 567 0 420 330 34 62 chr10 38655750 38656102 -106933186 + L2 LINE L2 2545 2886 -428 458 231 27 12 chr10 38656352 38656498 -106932790 + MLT1H LTR MaLR 412 547 -2 352 307 139 0 chr10 38656498 38656635 -106932653 + L2 LINE L2 2905 3060 -253 3584 225 48 23 chr10 38656667 38657166 -106932122 - MER21B LTR ERV1 -11 852 322 2140 127 10 0 chr10 38657166 38657473 -106931815 - AluSp SINE Alu -3 310 1 3584 225 48 23 chr10 38657473 38657804 -106931484 - MER21B LTR ERV1 -541 322 1 2234 112 3 0 chr10 38657967 38658263 -106931025 + AluSx SINE Alu 1 297 -15 351 349 89 19 chr10 38658351 38658666 -106930622 + L2 LINE L2 2641 2977 -337 2013 267 137 35 chr10 38658861 38660153 -106929135 - L2 LINE L2 -27 3286 1859 313 322 0 0 chr10 38660198 38660285 -106929003 + L2 LINE L2 3184 3270 -2 779 222 0 0 chr10 38661653 38661806 -106927482 - FRAM SINE Alu -22 154 2 1203 60 60 6 chr10 38661894 38662061 -106927227 + L1PA5 LINE L1 5979 6154 0 200 188 281 31 chr10 38663185 38663281 -106926007 - MIR SINE MIR -126 136 17 289 343 107 34 chr10 38663428 38663606 -106925682 - L2 LINE L2 -2 3270 3080 1249 107 0 37 chr10 38663663 38663850 -106925438 - AluSx SINE Alu -132 180 1 211 263 163 0 chr10 38664381 38664461 -106924827 + L2 LINE L2 3148 3240 -32 213 121 0 0 chr10 38664477 38664510 -106924778 + (T)n Simple_repeat Simple_repeat 1 33 0 302 301 41 32 chr10 38667221 38667344 -106921944 - L1MEd LINE L1 -4938 1181 1058 4971 106 23 1 chr10 38667351 38668123 -106921165 - L1PA11 LINE L1 -1 6173 5385 1078 250 71 38 chr10 38668330 38668722 -106920566 - L2 LINE L2 -754 2560 2156 474 146 117 58 chr10 38669903 38670006 -106919282 + AluJo SINE Alu 84 192 -120 665 157 0 0 chr10 38670205 38670307 -106918981 + AluJo SINE Alu 197 298 -14 557 282 46 5 chr10 38670917 38671133 -106918155 + LTR33 LTR ERVL 297 521 0 299 301 73 23 chr10 38672035 38672254 -106917034 + LTR33 LTR ERVL 230 459 -62 1522 96 18 9 chr10 38672690 38672908 -106916380 + AluSq SINE Alu 91 310 -3 24 91 0 0 chr10 38673034 38673100 -106916188 + AT_rich Low_complexity Low_complexity 1 66 0 2160 223 15 33 chr10 38673803 38674405 -106914883 - L1MB8 LINE L1 -1 6246 5656 727 186 41 71 chr10 38674405 38674694 -106914594 + MLT1A2 LTR MaLR 1 336 -38 9525 238 49 23 chr10 38674709 38678358 -106910930 - L1MB8 LINE L1 -587 5660 1956 2504 79 0 0 chr10 38678358 38678662 -106910626 - AluY SINE Alu -7 304 1 9525 238 49 23 chr10 38678662 38678745 -106910543 - L1MB8 LINE L1 -4291 1956 1877 781 296 47 0 chr10 38679060 38679357 -106909931 - L1MEc LINE L1 -4574 2564 2254 6372 80 20 6 chr10 38679360 38680473 -106908815 + L1PA13 LINE L1 5025 6152 -11 227 278 0 0 chr10 38680771 38680843 -106908445 - L1MEc LINE L1 -4846 2113 2042 1938 281 38 20 chr10 38680847 38681456 -106907832 - L1MEc LINE L1 -6233 626 7 291 317 0 0 chr10 38683006 38683088 -106906200 + (CATATA)n Simple_repeat Simple_repeat 4 85 0 767 234 129 10 chr10 38734071 38734280 -106855008 + MIR SINE MIR 29 262 0 1732 162 46 15 chr10 38734979 38735306 -106853982 - MER1B DNA MER1_type 0 337 1 29 47 0 0 chr10 38736445 38736488 -106852800 + AT_rich Low_complexity Low_complexity 1 43 0 225 160 60 0 chr10 38737084 38737134 -106852154 - THE1C LTR MaLR -4 392 340 1037 89 45 68 chr10 38737306 38737529 -106851759 - THE1C LTR MaLR -200 228 1 2300 96 20 0 chr10 38737843 38738146 -106851142 + AluSx SINE Alu 1 309 -3 27 0 0 0 chr10 38738387 38738414 -106850874 + AT_rich Low_complexity Low_complexity 1 27 0 387 41 0 0 chr10 38738664 38738713 -106850575 + (CA)n Simple_repeat Simple_repeat 1 49 0 224 57 0 29 chr10 38740426 38740461 -106848827 + (GGA)n Simple_repeat Simple_repeat 3 36 0 2164 122 0 7 chr10 38740511 38740814 -106848474 + AluSq SINE Alu 1 301 -12 530 306 93 29 chr10 38740821 38741380 -106847908 + L1ME3A LINE L1 4692 5286 -860 371 243 59 41 chr10 38741707 38741876 -106847412 + L1ME3A LINE L1 5780 5951 -219 1442 248 48 36 chr10 38742280 38742756 -106846532 + MER74B LTR ERVL 59 540 -82 1797 176 24 12 chr10 38743861 38744201 -106845087 + MER2 DNA MER2_type 1 344 0 232 136 15 15 chr10 38745021 38745087 -106844201 + A-rich Low_complexity Low_complexity 2 67 0 940 130 33 22 chr10 38746745 38746929 -106842359 - MER53 DNA DNA 0 189 4 614 288 25 0 chr10 38747140 38747300 -106841988 + MER5B DNA MER1_type 15 178 0 301 282 135 6 chr10 38749283 38749439 -106839849 + L1M4 LINE L1 1961 2136 -5327 266 127 127 73 chr10 38749473 38749583 -106839705 + L1M4 LINE L1 2286 2401 -5164 228 240 27 13 chr10 38749649 38749724 -106839564 + (TA)n Simple_repeat Simple_repeat 2 77 0 648 245 61 96 chr10 38749752 38750252 -106839036 + L1M4 LINE L1 2592 3071 -4675 1108 184 18 0 chr10 38750252 38750475 -106838813 - L1MA8 LINE L1 -3 6288 6062 648 245 61 96 chr10 38750475 38750545 -106838743 + L1M4 LINE L1 3071 3142 -4604 447 261 37 15 chr10 38750629 38750763 -106838525 + L2 LINE L2 3177 3313 0 25 0 0 0 chr10 38751718 38751743 -106837545 + AT_rich Low_complexity Low_complexity 1 25 0 31 26 0 0 chr10 38751876 38751914 -106837374 + AT_rich Low_complexity Low_complexity 1 38 0 198 103 0 0 chr10 38752661 38752690 -106836598 + (CA)n Simple_repeat Simple_repeat 2 30 0 185 236 55 0 chr10 38752884 38752939 -106836349 + MIR SINE MIR 159 216 -46 389 185 33 11 chr10 38753889 38753981 -106835307 - L1MA9 LINE L1 -28 6284 6191 30 45 0 0 chr10 38754586 38754630 -106834658 + AT_rich Low_complexity Low_complexity 1 44 0 2690 140 2 2 chr10 38755061 38755505 -106833783 + L1PB4 LINE L1 5346 5789 -367 336 202 0 26 chr10 38755505 38755619 -106833669 + (TA)n Simple_repeat Simple_repeat 1 111 0 2380 129 3 11 chr10 38755688 38756059 -106833229 + L1PB4 LINE L1 5776 6143 -13 45 19 0 0 chr10 38756076 38756128 -106833160 + AT_rich Low_complexity Low_complexity 1 52 0 2151 112 0 7 chr10 38756355 38756650 -106832638 - AluSg SINE Alu -17 293 1 235 288 107 12 chr10 38756696 38757019 -106832269 + L1ME LINE L1 5279 5632 -489 317 338 127 42 chr10 38757705 38757918 -106831370 + MLT1I LTR MaLR 104 334 -75 302 362 31 0 chr10 38758503 38758630 -106830658 - MIR SINE MIR -13 249 119 1100 148 21 93 chr10 38758651 38758978 -106830310 + MER96B DNA MER1_type? 46 349 -64 3906 144 61 14 chr10 38758978 38759684 -106829604 - L1MC1 LINE L1 0 6613 5875 2220 19 0 0 chr10 38759740 38759999 -106829289 - L1PA3 LINE L1 -3 6152 5894 876 172 30 10 chr10 38760006 38760209 -106829079 - L1MC1 LINE L1 -749 5875 5597 * 9247 209 53 14 chr10 38760199 38764158 -106825130 - L1MC1 LINE L1 -1329 5097 941 2399 64 0 3 chr10 38764158 38764454 -106824834 - AluY SINE Alu -16 295 1 9247 209 53 14 chr10 38764454 38764981 -106824307 - L1MC1 LINE L1 -5485 941 436 576 303 62 31 chr10 38765000 38765324 -106823964 + L1ME3A LINE L1 5313 5645 -519 631 223 99 20 chr10 38765414 38765615 -106823673 - MER2 DNA MER2_type 0 345 129 5411 129 103 11 chr10 38765615 38766598 -106822690 + Tigger3b DNA MER2_type 2 1074 -157 352 296 107 6 chr10 38766598 38766757 -106822531 + L1ME3A LINE L1 5763 5937 -233 307 265 99 63 chr10 38767056 38767279 -106822009 + HAL1 LINE L1 2064 2294 -213 225 227 80 0 chr10 38767282 38767357 -106821931 + HAL1 LINE L1 2322 2402 -105 1923 131 178 8 chr10 38767367 38767562 -106821726 - MSTA LTR MaLR -7 421 260 4471 97 5 3 chr10 38767562 38768183 -106821105 - L1PA10 LINE L1 -2 6166 5545 1923 131 178 8 chr10 38768183 38768347 -106820941 - MSTA LTR MaLR -168 260 1 21 57 0 0 chr10 38768430 38768465 -106820823 + AT_rich Low_complexity Low_complexity 1 35 0 182 229 243 0 chr10 38769552 38769622 -106819666 - MIR SINE MIR -1 261 175 329 279 29 88 chr10 38769629 38769765 -106819523 + MIR SINE MIR 114 241 -21 573 241 52 31 chr10 38769786 38769977 -106819311 + L2 LINE L2 2181 2375 -939 3153 140 15 39 chr10 38770025 38770454 -106818834 + MER1A DNA MER1_type 2 417 -2283 2085 117 0 37 chr10 38770454 38770778 -106818510 + AluSx SINE Alu 1 312 0 3153 140 15 39 chr10 38770778 38770885 -106818403 + MER1A DNA MER1_type 417 525 -2 831 253 4 56 chr10 38770930 38771179 -106818109 + MIR SINE MIR 25 260 -2 653 334 44 39 chr10 38771184 38771573 -106817715 + L2 LINE L2 2403 2793 -521 447 284 7 47 chr10 38771653 38771801 -106817487 + MIR SINE MIR 111 252 -10 605 336 50 69 chr10 38771815 38772294 -106816994 + L2 LINE L2 2827 3296 -17 2206 121 0 3 chr10 38774522 38774828 -106814460 + AluSc SINE Alu 4 308 -1 1247 220 178 48 chr10 38775840 38776300 -106812988 - MLT2B1 LTR ERVL 0 520 1 4754 216 105 31 chr10 38776674 38778581 -106810707 + L1MD3 LINE L1 4848 5403 -743 * 23363 180 23 17 chr10 38778575 38779309 -106809979 + L1PA11 LINE L1 1 729 -6883 1904 107 0 8 chr10 38779309 38779572 -106809716 - AluSx SINE Alu -16 296 36 23363 180 23 17 chr10 38779572 38785580 -106803708 + L1PA11 LINE L1 729 7611 -1 957 204 52 0 chr10 38785574 38785804 -106803484 + L1MC3 LINE L1 6857 7098 -687 * 259 299 46 0 chr10 38785807 38785894 -106803394 + MLT1F1 LTR MaLR 39 129 -438 2762 173 36 12 chr10 38785896 38786473 -106802815 + L1MC3 LINE L1 7194 7784 -1 375 363 86 25 chr10 38787016 38787294 -106801994 - L3b LINE CR1 -173 1410 1116 273 29 0 0 chr10 38788087 38788121 -106801167 + (TG)n Simple_repeat Simple_repeat 1 34 0 273 29 0 0 chr10 38788120 38788154 -106801134 + (GA)n Simple_repeat Simple_repeat 1 34 0 1658 159 11 22 chr10 38789246 38789523 -106799765 + AluJb SINE Alu 15 288 -24 506 312 73 14 chr10 38790447 38790665 -106798623 + MIR SINE MIR 32 262 0 799 196 17 39 chr10 38791334 38791513 -106797775 + FRAM SINE Alu 1 175 -1 203 184 0 0 chr10 38791563 38791601 -106797687 + (TA)n Simple_repeat Simple_repeat 2 39 0 377 69 0 17 chr10 38792307 38792365 -106796923 + (CA)n Simple_repeat Simple_repeat 2 58 0 799 253 115 59 chr10 38792666 38793223 -106796065 - MLT1G LTR MaLR -2 588 1 206 31 0 31 chr10 38793405 38793437 -106795851 + (TAAA)n Simple_repeat Simple_repeat 4 34 0 23 78 0 0 chr10 38794588 38794639 -106794649 + AT_rich Low_complexity Low_complexity 1 51 0 5826 191 164 40 chr10 38795463 38797024 -106792264 - MER52A LTR ERV1 0 1755 1 180 118 0 59 chr10 38797488 38797522 -106791766 - L2 LINE L2 -2085 1229 1198 193 365 46 51 chr10 38797831 38798264 -106791024 - L2 LINE L2 -422 2892 2462 2252 108 0 25 chr10 38800369 38800684 -106788604 - AluSq SINE Alu -6 307 1 6982 21 0 1 chr10 38800714 38801523 -106787765 + L1PA3 LINE L1 5345 6152 -3 23 0 0 0 chr10 38801813 38801836 -106787452 + AT_rich Low_complexity Low_complexity 1 23 0 1475 106 15 0 chr10 38802184 38802383 -106786905 + AluSg/x SINE Alu 108 309 -1 200 33 0 33 chr10 38802443 38802473 -106786815 + (TTTTG)n Simple_repeat Simple_repeat 3 31 0 1990 157 71 8 chr10 38802631 38803027 -106786261 + MSTA LTR MaLR 1 421 -7 21 0 0 0 chr10 38804405 38804426 -106784862 + AT_rich Low_complexity Low_complexity 1 21 0 2205 117 45 31 chr10 38804812 38805171 -106784117 + THE1B LTR MaLR 1 364 0 347 177 40 7 chr10 38806461 38806540 -106782748 - MIR SINE MIR -63 145 86 2100 175 24 5 chr10 38807836 38808253 -106781035 + L1MB1 LINE L1 5744 6168 0 311 279 195 19 chr10 38808264 38808418 -106780870 + MIR SINE MIR 41 221 -41 366 258 75 33 chr10 38809675 38809795 -106779493 + MIR3 SINE MIR 65 189 -19 331 193 307 0 chr10 38810900 38810988 -106778300 + MIR3 SINE MIR 81 195 -13 291 300 0 0 chr10 38812375 38812455 -106776833 + (TA)n Simple_repeat Simple_repeat 2 81 0 1938 281 38 20 chr10 38814005 38814614 -106774674 + L1MB8 LINE L1 7 626 -6233 227 278 0 0 chr10 38814618 38814690 -106774598 + L1MB8 LINE L1 2042 2113 -4846 6372 80 27 13 chr10 38814988 38816101 -106773187 - L1PA13 LINE L1 -11 6152 5025 781 296 47 0 chr10 38816104 38816401 -106772887 + L1MB8 LINE L1 2254 2564 -4574 9579 238 48 22 chr10 38816716 38816799 -106772489 + L1MB8 LINE L1 2619 2698 -4291 2504 79 0 0 chr10 38816799 38817103 -106772185 + AluY SINE Alu 1 304 -7 9579 238 48 22 chr10 38817103 38820752 -106768536 + L1MB8 LINE L1 2698 6402 -587 727 186 41 71 chr10 38820767 38821056 -106768232 - MLT1A2 LTR MaLR -38 336 1 2160 223 15 33 chr10 38821056 38821658 -106767630 + L1MB8 LINE L1 6398 6988 -1 24 91 0 0 chr10 38822362 38822428 -106766860 + AT_rich Low_complexity Low_complexity 1 66 0 1522 96 18 9 chr10 38822554 38822772 -106766516 - AluSq SINE Alu -3 310 91 300 320 64 14 chr10 38823208 38823427 -106765861 - LTR33 LTR ERVL -62 459 230 557 282 46 5 chr10 38824328 38824544 -106764744 - LTR33 LTR ERVL 0 521 297 716 147 0 0 chr10 38825148 38825257 -106764031 - AluJo SINE Alu -7 305 197 474 146 117 58 chr10 38825456 38825559 -106763729 - AluJo SINE Alu -120 192 84 1047 253 71 38 chr10 38826740 38827132 -106762156 + L2 LINE L2 2156 2560 -754 4971 106 23 1 chr10 38827339 38828111 -106761177 + L1PA11 LINE L1 5385 6173 -1 302 301 41 32 chr10 38828118 38828241 -106761047 + L1MEd LINE L1 1058 1181 -4938 213 121 0 0 chr10 38830952 38830985 -106758303 + (A)n Simple_repeat Simple_repeat 1 33 0 211 263 163 0 chr10 38831001 38831081 -106758207 - L2 LINE L2 -32 3240 3148 1249 107 0 37 chr10 38831612 38831799 -106757489 + AluSx SINE Alu 1 180 -132 289 343 107 34 chr10 38831856 38832034 -106757254 + L2 LINE L2 3080 3270 -2 200 188 281 31 chr10 38832181 38832277 -106757011 + MIR SINE MIR 17 136 -126 1203 60 60 6 chr10 38833401 38833568 -106755720 - L1PA5 LINE L1 0 6154 5979 779 222 0 0 chr10 38833656 38833809 -106755479 + FRAM SINE Alu 2 154 -22 313 322 0 0 chr10 38835177 38835264 -106754024 - L2 LINE L2 -2 3270 3184 2013 267 137 35 chr10 38835309 38836601 -106752687 + L2 LINE L2 1859 3286 -27 351 349 89 19 chr10 38836796 38837111 -106752177 - L2 LINE L2 -337 2977 2641 2234 112 3 0 chr10 38837199 38837495 -106751793 - AluSx SINE Alu -15 297 1 3583 226 48 24 chr10 38837658 38837989 -106751299 + MER21B LTR ERV1 1 323 -540 2266 114 10 0 chr10 38837989 38838296 -106750992 + AluSq SINE Alu 1 310 -3 3583 226 48 24 chr10 38838296 38838796 -106750492 + MER21B LTR ERV1 323 852 -11 352 307 139 0 chr10 38838828 38838965 -106750323 - L2 LINE L2 -253 3060 2905 491 234 30 14 chr10 38838965 38839121 -106750167 - MLT1H LTR MaLR -2 547 383 420 330 34 62 chr10 38839362 38839714 -106749574 - L2 LINE L2 -428 2886 2545 1565 244 139 30 chr10 38839996 38840505 -106748783 - MLT1F1 LTR MaLR 0 567 3 5232 152 31 44 chr10 38840841 38840945 -106748343 - L1PB1 LINE L1 -2 6149 6045 2867 0 0 0 chr10 38840945 38841251 -106748037 - AluYa5 SINE Alu -5 306 1 5232 152 31 44 chr10 38841251 38843157 -106746131 - L1PB1 LINE L1 -106 6045 4177 668 273 128 10 chr10 38843149 38843616 -106745672 + L1ME3A LINE L1 5401 5934 -255 * 204 111 0 0 chr10 38844493 38844529 -106744759 + (CA)n Simple_repeat Simple_repeat 1 36 0 338 0 24 0 chr10 38844992 38845034 -106744254 + (TTTTA)n Simple_repeat Simple_repeat 2 44 0 1946 132 21 0 chr10 38845037 38845317 -106743971 - AluSx SINE Alu -26 286 1 2335 67 7 0 chr10 38846521 38846805 -106742483 + AluY SINE Alu 6 291 -20 417 246 0 0 chr10 38846808 38846926 -106742362 + (TATATG)n Simple_repeat Simple_repeat 2 119 0 1766 193 22 14 chr10 38848116 38848484 -106740804 - L1PA16 LINE L1 -22 6144 5774 2124 98 0 4 chr10 38848716 38848993 -106740295 + AluY SINE Alu 1 276 -35 225 0 0 0 chr10 38848994 38849019 -106740269 + (TC)n Simple_repeat Simple_repeat 2 26 0 475 70 0 62 chr10 38849019 38849147 -106740141 + (TA)n Simple_repeat Simple_repeat 2 121 0 224 329 255 12 chr10 38849639 38849800 -106739488 + MIR SINE MIR 52 251 -11 241 338 0 0 chr10 38851021 38851092 -106738196 + MIR SINE MIR 115 185 -77 843 192 54 17 chr10 38851153 38851329 -106737959 - MIR SINE MIR -60 202 24 434 321 14 21 chr10 38851470 38851610 -106737678 + MIR3 SINE MIR 67 205 -3 199 321 127 0 chr10 38851652 38851786 -106737502 + L3b LINE CR1 1316 1466 -117 24 32 0 0 chr10 38852818 38852849 -106736439 + AT_rich Low_complexity Low_complexity 1 31 0 32 26 0 0 chr10 38854399 38854438 -106734850 + AT_rich Low_complexity Low_complexity 1 39 0 11599 140 27 13 chr10 38854448 38857630 -106731658 - L1MA1 LINE L1 0 7721 4493 6637 129 37 1 chr10 38857628 38858686 -106730602 - L1MA1 LINE L1 -4723 2842 1747 * 21 0 0 0 chr10 38858720 38858741 -106730547 + AT_rich Low_complexity Low_complexity 1 21 0 1386 118 80 38 chr10 38861445 38861683 -106727605 + Tigger2a DNA MER2_type 1 248 -186 864 271 24 0 chr10 38862076 38862286 -106727002 + MER58A DNA MER1_type 10 224 0 335 297 116 7 chr10 38862902 38863057 -106726231 + MIR SINE MIR 1 172 -90 3452 236 49 6 chr10 38865446 38866320 -106722968 + L1P LINE L1 1940 2851 -3295 2369 196 7 0 chr10 38866373 38866821 -106722467 + L1P LINE L1 3803 4253 -1893 258 288 12 0 chr10 38866822 38866902 -106722386 + L2 LINE L2 2527 2607 -707 217 329 205 48 chr10 38867009 38867380 -106721908 + L2 LINE L2 2867 3295 -18 1659 221 19 27 chr10 38867634 38868000 -106721288 - MLT1A2 LTR MaLR -11 363 1 242 344 48 40 chr10 38868699 38868824 -106720464 - MER5A DNA MER1_type -6 183 58 2082 129 0 3 chr10 38869165 38869467 -106719821 + AluSx SINE Alu 1 301 -11 360 323 40 25 chr10 38869493 38869784 -106719504 + L1ME LINE L1 2199 2457 -3758 2177 125 0 0 chr10 38869913 38870216 -106719072 - AluSq SINE Alu -10 303 1 2356 83 0 10 chr10 38870221 38870533 -106718755 - AluSg SINE Alu 0 310 2 2246 106 0 13 chr10 38871787 38872098 -106717190 - AluSx SINE Alu -5 307 1 287 265 173 33 chr10 38873223 38873559 -106715729 + L1ME LINE L1 5351 5733 -457 195 70 47 23 chr10 38873844 38873887 -106715401 + (TA)n Simple_repeat Simple_repeat 1 44 0 1043 213 7 79 chr10 38873887 38873979 -106715309 + MLT1B LTR MaLR 10 107 -283 1356 126 39 39 chr10 38873979 38874209 -106715079 - MER30 DNA MER1_type 0 230 1 1043 213 7 79 chr10 38874209 38874393 -106714895 + MLT1B LTR MaLR 107 266 -124 863 159 7 0 chr10 38874420 38874558 -106714730 + L1M4 LINE L1 5489 5627 -547 745 162 33 8 chr10 38874578 38874727 -106714561 + MLT1B LTR MaLR 275 389 -1 186 133 0 0 chr10 38874732 38874762 -106714526 + (TATG)n Simple_repeat Simple_repeat 2 31 0 1016 210 31 43 chr10 38874768 38875116 -106714172 - Tigger3(Golem) DNA MER2_type 0 3036 1 21 0 0 0 chr10 38875145 38875166 -106714122 + AT_rich Low_complexity Low_complexity 1 21 0 22 70 0 0 chr10 38875212 38875255 -106714033 + AT_rich Low_complexity Low_complexity 1 43 0 4623 191 21 19 chr10 38876358 38877423 -106711865 - L1MC2 LINE L1 -95 6249 5186 370 237 58 106 chr10 38877430 38877607 -106711681 - L1ME4a LINE L1 -2 6119 5964 1732 209 62 66 chr10 38877607 38878041 -106711247 + MLT1D LTR MaLR 5 438 -67 1859 183 0 0 chr10 38878041 38878353 -106710935 - AluJo SINE Alu 0 312 1 1732 209 62 66 chr10 38878353 38878421 -106710867 + MLT1D LTR MaLR 438 505 0 370 237 58 106 chr10 38878421 38878572 -106710716 - L1ME4a LINE L1 -157 5964 5807 2450 173 97 45 chr10 38879025 38879169 -106710119 + MLT1F1 LTR MaLR 1 136 -431 15750 33 7 2 chr10 38879169 38881866 -106707422 + L1PA4 LINE L1 3469 6155 0 2450 173 97 45 chr10 38881866 38882258 -106707030 + MLT1F1 LTR MaLR 136 565 -2 210 400 189 0 chr10 38882758 38882943 -106706345 + L2 LINE L2 2651 2870 -444 520 350 15 0 chr10 38883021 38883218 -106706070 + MIR SINE MIR 57 256 -6 237 366 117 25 chr10 38883245 38883526 -106705762 + L2 LINE L2 2966 3272 0 1517 177 0 0 chr10 38883701 38883938 -106705350 + AluJo SINE Alu 44 280 -32 689 273 67 38 chr10 38883977 38884292 -106704996 + HsTC2a DNA Tc2 1 324 -420 1094 304 112 22 chr10 38884307 38884688 -106704600 + L1MC4 LINE L1 7189 7535 -507 489 34 0 0 chr10 38884688 38884747 -106704541 + (CA)n Simple_repeat Simple_repeat 1 59 0 1094 304 112 22 chr10 38884747 38885127 -106704161 + L1MC4 LINE L1 7535 8018 -24 299 214 125 54 chr10 38885212 38885324 -106703964 + HsTC2a DNA Tc2 317 436 -306 1911 122 0 4 chr10 38885416 38885679 -106703609 - AluSc SINE Alu -47 262 1 406 206 237 10 chr10 38885760 38885842 -106703446 + HsTC2a DNA Tc2 505 567 -1331 251 53 0 26 chr10 38885842 38885880 -106703408 + (TAAAA)n Simple_repeat Simple_repeat 4 40 0 406 206 237 10 chr10 38885880 38885991 -106703297 + HsTC2a DNA Tc2 567 742 0 366 325 6 18 chr10 38886523 38886689 -106702599 + (CATATA)n Simple_repeat Simple_repeat 4 167 0 1917 165 9 6 chr10 38886833 38887236 -106702052 - L1MA9 LINE L1 -697 5615 5212 3542 168 34 10 chr10 38887240 38887918 -106701370 + L1MA9 LINE L1 5619 6312 0 766 205 40 0 chr10 38890388 38890539 -106698749 + MER45A DNA AcHobo 1 157 -21 1111 243 31 6 chr10 38892588 38892913 -106696375 + L1MB4 LINE L1 4810 5142 -1004 2584 82 0 6 chr10 38892914 38893266 -106696022 - THE1A LTR MaLR 0 355 6 3610 182 15 49 chr10 38893268 38893503 -106695785 + L1MB4 LINE L1 5141 5382 -798 663 218 0 15 chr10 38893503 38893636 -106695652 + FLAM_A SINE Alu 1 131 -2 3610 182 15 49 chr10 38893636 38894359 -106694929 + L1MB4 LINE L1 5382 6068 -112 285 264 18 73 chr10 38896484 38896594 -106692694 - MIR SINE MIR -5 257 154 1064 245 162 35 chr10 38896599 38897080 -106692208 - MLT1H LTR MaLR -5 544 3 237 244 0 0 chr10 38897083 38897128 -106692160 - MIR SINE MIR -105 157 113 210 309 16 98 chr10 38897842 38898036 -106691252 + MIR SINE MIR 72 249 -13 322 243 53 66 chr10 38898447 38898599 -106690689 + L1MB8 LINE L1 6029 6178 0 291 140 0 0 chr10 38898635 38898685 -106690603 + (TC)n Simple_repeat Simple_repeat 1 50 0 1130 149 0 0 chr10 38898687 38898848 -106690440 - AluJb SINE Alu -15 297 137 21 82 0 0 chr10 38899240 38899289 -106689999 + AT_rich Low_complexity Low_complexity 1 49 0 379 296 9 0 chr10 38900938 38901053 -106688235 - MER94 DNA DNA 0 134 19 558 255 39 25 chr10 38901272 38901445 -106687843 + MIR SINE MIR 16 191 -69 456 262 118 16 chr10 38901652 38901839 -106687449 - MLT1L LTR MaLR -210 405 200 21 36 0 0 chr10 38902391 38902419 -106686869 + AT_rich Low_complexity Low_complexity 1 28 0 297 0 0 0 chr10 38903582 38903615 -106685673 + (T)n Simple_repeat Simple_repeat 1 33 0 202 283 98 22 chr10 38904047 38904139 -106685149 - MIR3 SINE MIR -5 203 105 180 373 0 0 chr10 38904383 38904442 -106684846 + L2 LINE L2 3241 3299 -14 413 278 71 114 chr10 38904906 38905161 -106684127 + MIR SINE MIR 10 253 -9 881 175 0 0 chr10 38907267 38907393 -106681895 + FLAM_C SINE Alu 1 126 -17 23 33 0 0 chr10 38907393 38907423 -106681865 + AT_rich Low_complexity Low_complexity 1 30 0 253 259 0 0 chr10 38907590 38907648 -106681640 - L2 LINE L2 0 3313 3256 480 206 62 0 chr10 38908041 38908138 -106681150 - MER5A DNA MER1_type -83 106 4 332 224 28 47 chr10 38908180 38908287 -106681001 + L1MC4 LINE L1 6598 6702 -1340 223 85 43 0 chr10 38908294 38908341 -106680947 + (TA)n Simple_repeat Simple_repeat 1 49 0 882 280 91 26 chr10 38908718 38909214 -106680074 + L1MEd LINE L1 499 1026 -5093 574 313 14 10 chr10 38909504 38909712 -106679576 - MIR SINE MIR -13 249 41 257 329 112 0 chr10 38910315 38910458 -106678830 + L2 LINE L2 2543 2701 -613 5275 158 26 2 chr10 38910466 38911434 -106677854 - L1MC1 LINE L1 -5 6328 5338 429 326 139 0 chr10 38911452 38911667 -106677621 + L2 LINE L2 2691 2935 -379 232 268 113 52 chr10 38911676 38911773 -106677515 - MER96 DNA MER1_type? -24 151 49 413 187 121 0 chr10 38911774 38911865 -106677423 + MER96 DNA MER1_type? 25 126 -49 556 79 13 0 chr10 38911865 38911941 -106677347 + MADE1 DNA Mariner 1 77 -3 243 183 0 0 chr10 38912808 38912855 -106676433 + (TG)n Simple_repeat Simple_repeat 2 51 -10 3999 172 65 22 chr10 38912855 38913682 -106675606 - MER21B LTR ERV1 0 863 1 243 183 0 0 chr10 38913682 38913694 -106675594 + (TG)n Simple_repeat Simple_repeat 50 61 0 449 125 0 0 chr10 38913776 38913840 -106675448 + AluS SINE Alu 1 64 -249 4147 91 0 13 chr10 38913842 38914467 -106674821 + L1P LINE L1 4655 5271 -875 1671 211 71 21 chr10 38914488 38914923 -106674365 + LTR2B LTR ERV1 34 490 0 6817 60 10 0 chr10 38914923 38915793 -106673495 + L1PA7 LINE L1 5268 6146 -8 1785 207 29 25 chr10 38915898 38916225 -106673063 - L1MD2 LINE L1 -8 6351 6020 1942 205 32 52 chr10 38916225 38916782 -106672506 - LTR55 LTR ERV -2 546 1 1785 207 29 25 chr10 38916782 38916898 -106672390 - L1MD2 LINE L1 -339 6020 5906 1031 189 16 21 chr10 38916901 38917092 -106672196 - AluJo SINE Alu -36 276 87 1890 213 14 50 chr10 38917095 38917315 -106671973 - L1MD2 LINE L1 -337 5905 5679 2245 106 3 0 chr10 38917315 38917616 -106671672 + AluY SINE Alu 1 302 -9 1890 213 14 50 chr10 38917616 38917878 -106671410 - L1MD2 LINE L1 -563 5679 5440 7205 215 47 39 chr10 38917893 38919108 -106670180 - L1MC1 LINE L1 -6 6327 5124 1555 92 10 10 chr10 38919108 38919315 -106669973 + AluSc SINE Alu 84 290 -19 7205 215 47 39 chr10 38919315 38919911 -106669377 - L1MC1 LINE L1 -1209 5124 4534 2326 98 3 0 chr10 38919911 38920217 -106669071 - AluSg SINE Alu -3 307 1 7205 215 47 39 chr10 38920217 38922172 -106667116 - L1MC1 LINE L1 -1799 4534 2530 242 56 28 0 chr10 38923093 38923129 -106666159 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 2017 101 0 35 chr10 38923132 38923419 -106665869 - AluSc SINE Alu -32 277 1 194 418 0 0 chr10 38923813 38923880 -106665408 - L2 LINE L2 -73 3199 3133 245 365 131 27 chr10 38923971 38924614 -106664674 - L2 LINE L2 -219 3053 2348 201 147 0 0 chr10 38924904 38924938 -106664350 + (TTTTC)n Simple_repeat Simple_repeat 5 38 0 204 182 0 102 chr10 38924952 38925040 -106664248 + T-rich Low_complexity Low_complexity 4 82 0 368 295 33 87 chr10 38925695 38925936 -106663352 + MIR SINE MIR 35 262 0 321 317 137 0 chr10 38925926 38926109 -106663179 - MIR SINE MIR -6 256 49 * 254 241 58 35 chr10 38926983 38927070 -106662218 + MIR SINE MIR 23 111 -151 825 122 0 0 chr10 38927087 38927202 -106662086 - AluSx SINE Alu -2 308 194 1105 95 0 7 chr10 38927203 38927350 -106661938 - AluSx SINE Alu -166 146 1 242 253 63 0 chr10 38928134 38928213 -106661075 + MER58 DNA MER1_type 7 90 -251 1653 93 9 0 chr10 38929312 38929528 -106659760 - AluSp SINE Alu -12 301 84 235 338 133 27 chr10 38930613 38930876 -106658412 + L2 LINE L2 2497 2787 -527 286 318 62 82 chr10 38931039 38931394 -106657894 + L2 LINE L2 2923 3270 -2 548 239 210 0 chr10 38931710 38931877 -106657411 + L2 LINE L2 3111 3312 -1 22 35 0 0 chr10 38931980 38932009 -106657279 + AT_rich Low_complexity Low_complexity 1 29 0 1929 113 0 77 chr10 38932062 38932373 -106656915 - AluY SINE Alu -24 287 1 231 270 61 35 chr10 38932624 38932739 -106656549 - LTR33 LTR ERVL 0 521 404 332 347 56 7 chr10 38932753 38932897 -106656391 + MIR SINE MIR 2 152 -110 313 267 48 9 chr10 38933002 38933107 -106656181 + MIR SINE MIR 148 256 -6 218 250 0 18 chr10 38933112 38933168 -106656120 + (TTA)n Simple_repeat Simple_repeat 2 56 0 1477 314 49 16 chr10 38933196 38934283 -106655005 - L1 LINE L1 -1717 4429 3280 300 48 0 0 chr10 38934285 38934327 -106654961 - AluSp/q SINE Alu -10 293 252 241 285 108 38 chr10 38934353 38934511 -106654777 - MLT1C LTR MaLR -79 388 220 21 0 0 0 chr10 38934831 38934852 -106654436 + AT_rich Low_complexity Low_complexity 1 21 0 2098 78 7 18 chr10 38935094 38935398 -106653890 - AluY SINE Alu 0 301 1 2222 120 3 0 chr10 38935712 38936020 -106653268 - AluSp SINE Alu -4 309 1 327 312 12 42 chr10 38936196 38936439 -106652849 - L1MDa LINE L1 -910 1580 1239 579 209 0 0 chr10 38936453 38936558 -106652730 - FLAM_A SINE Alu -13 129 25 412 329 20 14 chr10 38936664 38936810 -106652478 - L1MDa LINE L1 -5031 1088 942 274 206 59 10 chr10 38936821 38936923 -106652365 + (TA)n Simple_repeat Simple_repeat 2 108 0 244 214 54 0 chr10 38936978 38937034 -106652254 - MLT1G1 LTR MaLR -72 523 465 533 269 68 29 chr10 38937042 38937312 -106651976 - MLT1G1 LTR MaLR -279 316 11 439 387 29 40 chr10 38938864 38939213 -106650075 + L2 LINE L2 2435 2779 -535 187 292 125 61 chr10 38939524 38939669 -106649619 - MIR3 SINE MIR -50 158 4 701 305 45 27 chr10 38939719 38940042 -106649246 - LTR16A LTR ERVL 0 457 127 424 270 40 31 chr10 38940482 38940704 -106648584 - L1MEc LINE L1 -4646 1750 1527 253 294 20 20 chr10 38940712 38940814 -106648474 - LTR16A LTR ERVL -318 132 31 1303 190 3 100 chr10 38941978 38942309 -106646979 + AluJo SINE Alu 1 299 -13 272 331 73 20 chr10 38942943 38943094 -106646194 + L2 LINE L2 2926 3084 -188 295 292 132 28 chr10 38943435 38943579 -106645709 + MIR3 SINE MIR 34 192 -16 2097 99 9 49 chr10 38944015 38944397 -106644891 - AluSx SINE Alu 0 369 1 21 36 0 0 chr10 38944446 38944474 -106644814 + AT_rich Low_complexity Low_complexity 1 28 0 279 236 27 27 chr10 38944592 38944702 -106644586 + CT-rich Low_complexity Low_complexity 3 112 0 487 368 53 10 chr10 38945442 38945746 -106643542 - L1MC4a LINE L1 -1906 5902 5586 3443 254 83 35 chr10 38945746 38948487 -106640801 + L1MB1 LINE L1 6 2277 -3693 288 219 14 14 chr10 38948510 38948583 -106640705 + Tigger5 DNA MER2_type 2251 2323 0 403 219 12 0 chr10 38948638 38948720 -106640568 + Tigger5 DNA MER2_type 2238 2320 -3 10188 203 49 53 chr10 38948721 38949301 -106639987 + L1MB1 LINE L1 2272 2853 -3139 658 235 0 0 chr10 38949301 38949416 -106639872 + FLAM_A SINE Alu 5 119 -14 522 31 0 0 chr10 38949416 38949480 -106639808 + (CA)n Simple_repeat Simple_repeat 2 65 0 10188 203 49 53 chr10 38949480 38950056 -106639232 + L1MB1 LINE L1 2852 3429 -2563 2160 55 7 58 chr10 38950056 38950365 -106638923 + AluY SINE Alu 1 293 -18 10188 203 49 53 chr10 38950365 38950526 -106638762 + L1MB1 LINE L1 3429 3589 -2403 2629 93 8 8 chr10 38950526 38950901 -106638387 - THE1C LTR MaLR 0 375 1 10188 203 49 53 chr10 38950901 38951480 -106637808 + L1MB1 LINE L1 3589 4169 -1823 444 84 127 0 chr10 38951480 38951551 -106637737 - MADE1 DNA Mariner 0 80 1 10188 203 49 53 chr10 38951551 38952671 -106636617 + L1MB1 LINE L1 4169 5268 -724 368 132 0 38 chr10 38952671 38952777 -106636511 + (TTATA)n Simple_repeat Simple_repeat 5 106 0 3687 162 23 4 chr10 38952795 38953532 -106635756 + L1MB1 LINE L1 5267 6016 0 816 153 8 0 chr10 38955470 38955601 -106633687 + FLAM_A SINE Alu 1 132 -1 737 246 18 1 chr10 38955748 38955800 -106633488 + MER58 DNA MER1_type 1 51 -2369 203 0 0 36 chr10 38955800 38955828 -106633460 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 737 246 18 1 chr10 38955828 38956068 -106633220 + MER58 DNA MER1_type 51 2418 -2 4832 187 80 62 chr10 38956505 38957627 -106631661 + Charlie1a DNA MER1_type 7 1160 -1601 1801 70 0 0 chr10 38957627 38957856 -106631432 + AluY SINE Alu 1 229 -82 4832 187 80 62 chr10 38957856 38958108 -106631180 + Charlie1a DNA MER1_type 1160 1406 -49 4550 150 11 5 chr10 38958114 38959647 -106629641 - L1PA13 LINE L1 -2 6161 4536 7871 163 10 6 chr10 38959647 38960226 -106629062 + L1P LINE L1 3107 3682 -2464 210 71 0 0 chr10 38960226 38960254 -106629034 + (CAA)n Simple_repeat Simple_repeat 3 30 0 7871 163 10 6 chr10 38960254 38961051 -106628237 + L1P LINE L1 3682 4489 -1657 1082 77 0 0 chr10 38961307 38961462 -106627826 + L1PB4 LINE L1 4357 4511 -1635 5231 132 23 0 chr10 38961473 38961485 -106627803 + L1PB4 LINE L1 5176 5186 -970 2277 116 0 0 chr10 38961485 38961787 -106627501 + AluSg SINE Alu 1 302 -8 5231 132 23 0 chr10 38961787 38962737 -106626551 + L1PB4 LINE L1 5186 6155 -1 1087 160 11 0 chr10 38963130 38963311 -106625977 + AluSg/x SINE Alu 129 311 -1 21 36 0 0 chr10 38963858 38963886 -106625402 + AT_rich Low_complexity Low_complexity 1 28 0 23 54 0 0 chr10 38965182 38965219 -106624069 + AT_rich Low_complexity Low_complexity 1 37 0 266 148 19 0 chr10 38965712 38965766 -106623522 + CT-rich Low_complexity Low_complexity 1 55 0 * 674 210 0 22 chr10 38965760 38965941 -106623347 + C-rich Low_complexity Low_complexity 2 178 0 24 67 0 0 chr10 38966186 38966231 -106623057 + AT_rich Low_complexity Low_complexity 1 45 0 216 67 0 0 chr10 38966853 38966883 -106622405 + (GA)n Simple_repeat Simple_repeat 2 31 0 339 311 11 0 chr10 38967926 38968031 -106621257 - MIR SINE MIR -82 126 20 2339 94 3 0 chr10 38968058 38968366 -106620922 - AluSp SINE Alu -4 309 1 461 319 62 0 chr10 38969002 38969228 -106620060 - HAL1 LINE L1 -856 1651 1412 220 366 93 21 chr10 38969620 38970137 -106619151 + L2 LINE L2 1260 1813 -1501 237 111 61 30 chr10 38970137 38970236 -106619052 + (TA)n Simple_repeat Simple_repeat 1 102 0 527 312 80 35 chr10 38970262 38970637 -106618651 - L1MC4a LINE L1 -1916 5892 5501 738 318 86 46 chr10 38970652 38971365 -106617923 + L2 LINE L2 2033 2773 -541 419 375 113 17 chr10 38971445 38971736 -106617552 + L2 LINE L2 2936 3254 -18 327 305 42 24 chr10 38972305 38972472 -106616816 - MIR SINE MIR -56 206 37 837 289 22 4 chr10 38972974 38973202 -106616086 + MIR SINE MIR 3 234 -28 1569 137 50 8 chr10 38973253 38973515 -106615773 + MER46B DNA MER2_type 1 148 -88 1929 184 9 0 chr10 38973519 38973861 -106615427 + MER7A DNA MER2_type 2 344 -2 288 170 0 0 chr10 38973867 38973920 -106615368 + (CA)n Simple_repeat Simple_repeat 2 54 0 558 211 18 0 chr10 38973924 38974038 -106615250 + Tigger3(Golem) DNA MER2_type 2912 3027 -2 475 113 75 0 chr10 38974041 38974121 -106615167 + MER46B DNA MER2_type 151 236 0 299 238 200 0 chr10 38975795 38975875 -106613413 + MER5A DNA MER1_type 17 112 -77 314 169 31 31 chr10 38975906 38975971 -106613317 + L2 LINE L2 3238 3302 -11 21 0 0 0 chr10 38977014 38977035 -106612253 + AT_rich Low_complexity Low_complexity 1 21 0 2178 116 0 0 chr10 38977113 38977406 -106611882 + AluSp SINE Alu 1 293 -20 2495 181 3 4 chr10 38977501 38978035 -106611253 - L1P LINE L1 -733 5428 4895 4694 124 6 11 chr10 38978036 38978762 -106610526 + L1PA15 LINE L1 5438 6159 -6 753 188 117 132 chr10 38978767 38979176 -106610112 - MER57A LTR ERV1 0 403 1 27 29 0 0 chr10 38979469 38979503 -106609785 + AT_rich Low_complexity Low_complexity 1 34 0 1390 179 33 100 chr10 38979815 38980206 -106609082 + MLT1A1 LTR MaLR 1 365 0 448 352 36 28 chr10 38980219 38980466 -106608822 - MIR SINE MIR -12 250 2 220 380 94 69 chr10 38980654 38980972 -106608316 - L2 LINE L2 -10 3262 2937 992 223 18 108 chr10 38981418 38981817 -106607471 - MLT1A1 LTR MaLR 0 365 3 24 53 0 0 chr10 38981897 38981935 -106607353 + AT_rich Low_complexity Low_complexity 1 38 0 428 328 78 15 chr10 38981935 38982139 -106607149 - MIR SINE MIR 0 262 46 484 42 14 14 chr10 38984243 38984315 -106604973 + (TCTA)n Simple_repeat Simple_repeat 3 74 0 296 280 50 60 chr10 38984612 38984812 -106604476 + HAL1 LINE L1 9 206 -2301 383 342 74 10 chr10 38985319 38985521 -106603767 + HAL1 LINE L1 738 952 -1555 315 161 0 0 chr10 38985523 38985579 -106603709 + GA-rich Low_complexity Low_complexity 1 56 0 1276 173 79 0 chr10 38985609 38985863 -106603425 - L1M3 LINE L1 -538 5630 5357 1061 292 81 29 chr10 38985944 38986537 -106602751 + HAL1 LINE L1 1087 1710 -797 342 234 122 20 chr10 38986542 38986739 -106602549 + L1ME2 LINE L1 2983 3199 -2947 22 70 0 0 chr10 38986788 38986831 -106602457 + AT_rich Low_complexity Low_complexity 1 43 0 301 246 35 26 chr10 38986890 38987004 -106602284 + L1ME2 LINE L1 3426 3540 -2606 497 274 147 81 chr10 38987080 38987515 -106601773 - MLT1H1 LTR MaLR 0 550 86 3890 253 86 22 chr10 38987587 38989873 -106599415 + L1ME2 LINE L1 3656 6079 -85 522 283 103 25 chr10 38990002 38990342 -106598946 + MLT1G LTR MaLR 180 584 -6 238 162 0 0 chr10 38991125 38991162 -106598126 + Alu SINE Alu 84 120 -182 2331 135 0 0 chr10 38992657 38992997 -106596291 + L1PA8A LINE L1 4 343 -5532 7281 114 20 2 chr10 38992997 38994850 -106594438 + L1PA8A LINE L1 4553 6426 -20 216 0 0 0 chr10 38994850 38994874 -106594414 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 7281 114 20 2 chr10 38994874 38994896 -106594392 + L1PA8A LINE L1 6426 6446 0 545 271 39 30 chr10 38995089 38995292 -106593996 - MIR SINE MIR -5 257 53 610 193 6 28 chr10 38995542 38995723 -106593565 + GA-rich Low_complexity Low_complexity 3 179 0 23 33 0 0 chr10 38996799 38996829 -106592459 + AT_rich Low_complexity Low_complexity 1 30 0 2042 78 88 7 chr10 39000700 39000983 -106588305 + AluY SINE Alu 1 306 -5 22 0 0 0 chr10 39002875 39002897 -106586391 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr10 39003448 39003479 -106585809 + AT_rich Low_complexity Low_complexity 1 31 0 2108 200 21 34 chr10 39003594 39004125 -106585163 - L1MA8 LINE L1 -22 7688 7165 * 2260 147 50 28 chr10 39004093 39004557 -106584731 - L1MA8 LINE L1 -935 6630 6157 * 2287 230 58 34 chr10 39004554 39004845 -106584443 - L1MA8 LINE L1 -3710 3855 3573 1471 124 0 0 chr10 39004845 39005046 -106584242 - AluSg/x SINE Alu -19 293 93 2287 230 58 34 chr10 39005046 39005797 -106583491 - L1MA8 LINE L1 -3992 3573 2781 415 288 22 0 chr10 39005800 39005950 -106583338 - L1M3d LINE L1 -4518 2509 2357 * 19761 166 28 27 chr10 39005947 39009386 -106579902 - L1MA3 LINE L1 -4 7720 4286 1994 98 4 7 chr10 39009386 39009660 -106579628 - AluSc SINE Alu -36 273 1 19761 166 28 27 chr10 39009660 39010867 -106578421 - L1MA3 LINE L1 -3438 4286 3082 2188 120 0 3 chr10 39010867 39011167 -106578121 + AluSx SINE Alu 3 301 -11 19761 166 28 27 chr10 39011167 39012095 -106577193 - L1MA3 LINE L1 -4642 3082 2156 3533 139 40 11 chr10 39012095 39012722 -106576566 - L1MA4 LINE L1 -3 6297 5653 4157 37 0 0 chr10 39012723 39013215 -106576073 - L1PA3 LINE L1 -1 6154 5663 19761 166 28 27 chr10 39013215 39013660 -106575628 - L1MA3 LINE L1 -5568 2156 1713 186 43 0 0 chr10 39013660 39013683 -106575605 + (TC)n Simple_repeat Simple_repeat 2 24 0 19761 166 28 27 chr10 39013683 39015355 -106573933 - L1MA3 LINE L1 -6011 1713 14 1707 256 54 68 chr10 39015378 39016397 -106572891 - L1M3d LINE L1 -4828 2209 7 768 232 163 11 chr10 39017439 39017629 -106571659 - MER58A DNA MER1_type -5 219 1 210 277 40 59 chr10 39017718 39017819 -106571469 - MIR SINE MIR 0 262 164 2164 124 19 35 chr10 39017863 39018233 -106571055 - THE1B LTR MaLR 0 364 1 1121 221 43 50 chr10 39018264 39018567 -106570721 - AluJo SINE Alu -1 301 1 1621 168 10 49 chr10 39018761 39019065 -106570223 + AluJb SINE Alu 1 292 -20 21 0 0 0 chr10 39019658 39019679 -106569609 + AT_rich Low_complexity Low_complexity 1 21 0 233 263 105 0 chr10 39023025 39023101 -106566187 - L2 LINE L2 -2 3270 3187 198 0 0 0 chr10 39023267 39023289 -106565999 + (TG)n Simple_repeat Simple_repeat 2 23 0 24 0 0 0 chr10 39024340 39024364 -106564924 + AT_rich Low_complexity Low_complexity 1 24 0 794 332 84 17 chr10 39024683 39025214 -106564074 - L2 LINE L2 0 3313 2749 612 299 49 0 chr10 39025237 39025401 -106563887 - MER58A DNA MER1_type -12 212 41 351 299 39 24 chr10 39025407 39025534 -106563754 + L1M3c LINE L1 176 304 -6009 2417 237 45 78 chr10 39025861 39026529 -106562759 + L1M3c LINE L1 803 1301 -5034 2111 110 10 10 chr10 39026529 39026830 -106562458 + AluSq SINE Alu 1 301 -12 2417 237 45 78 chr10 39026830 39027309 -106561979 + L1M3c LINE L1 1301 1794 -4541 376 240 0 1 chr10 39027325 39027418 -106561870 - MER33 DNA MER1_type -250 74 1 258 363 67 7 chr10 39027618 39027753 -106561535 - MIR SINE MIR -119 143 1 4727 222 53 30 chr10 39027783 39029205 -106560083 + Charlie1a DNA MER1_type 1 1455 0 193 383 12 0 chr10 39029613 39029694 -106559594 - L2 LINE L2 -5 3267 3186 23 33 0 0 chr10 39030745 39030775 -106558513 + AT_rich Low_complexity Low_complexity 1 30 0 288 302 107 39 chr10 39032272 39032413 -106556875 + MIR3 SINE MIR 79 205 -3 249 33 0 0 chr10 39032961 39032991 -106556297 + (TTTTA)n Simple_repeat Simple_repeat 2 31 0 1455 173 44 4 chr10 39032994 39033242 -106556046 - AluJo SINE Alu -31 281 24 252 86 0 0 chr10 39033290 39033325 -106555963 + (TG)n Simple_repeat Simple_repeat 2 36 0 205 284 25 25 chr10 39033343 39033424 -106555864 - MIR SINE MIR -136 126 46 263 279 85 79 chr10 39033814 39033979 -106555309 + L2 LINE L2 1731 1896 -1418 464 239 229 9 chr10 39034139 39034357 -106554931 - MLT1I LTR MaLR -52 357 92 515 198 10 0 chr10 39034815 39034916 -106554372 + MIR SINE MIR 124 225 -37 23 54 0 0 chr10 39035002 39035039 -106554249 + AT_rich Low_complexity Low_complexity 1 37 0 381 333 47 12 chr10 39035107 39035278 -106554010 - MIR3 SINE MIR -11 197 21 3031 65 0 2 chr10 39036240 39036643 -106552645 + L1P LINE L1 4482 4883 -1263 249 149 64 0 chr10 39036639 39036686 -106552602 - L1ME LINE L1 -296 5939 5890 * 1251 246 157 18 chr10 39036691 39037142 -106552146 - LTR40a LTR ERVL -5 514 1 4372 248 54 48 chr10 39037147 39037642 -106551646 - L1ME LINE L1 -346 5889 5398 1562 164 15 15 chr10 39037642 39037916 -106551372 - AluJo SINE Alu 0 312 39 4372 248 54 48 chr10 39037916 39037949 -106551339 - L1ME LINE L1 -837 5398 5367 1349 191 83 92 chr10 39037949 39038419 -106550869 + MER31B LTR ERV1 1 466 0 4372 248 54 48 chr10 39038419 39038588 -106550700 - L1ME LINE L1 -868 5367 5201 2064 135 0 7 chr10 39038588 39038892 -106550396 - AluSx SINE Alu -10 302 1 4372 248 54 48 chr10 39038892 39039197 -106550091 - L1ME LINE L1 -1034 5201 4899 5079 116 60 18 chr10 39039197 39040533 -106548755 + L1PA15 LINE L1 4784 6158 -7 4372 248 54 48 chr10 39040533 39041764 -106547524 - L1ME LINE L1 -1336 4899 3640 2174 95 10 10 chr10 39041764 39042068 -106547220 - AluY SINE Alu -7 304 1 4372 248 54 48 chr10 39042068 39042168 -106547120 - L1ME LINE L1 -2595 3640 3542 587 300 86 16 chr10 39042290 39042730 -106546558 - L1ME LINE L1 -5350 1046 576 321 268 206 19 chr10 39042861 39043070 -106546218 - L1ME LINE L1 -6013 383 136 1624 202 50 64 chr10 39043090 39043590 -106545698 - MER82 DNA MER2_type 0 653 161 360 0 0 0 chr10 39044182 39044222 -106545066 + (TG)n Simple_repeat Simple_repeat 2 41 0 327 49 0 0 chr10 39044482 39044523 -106544765 + (TC)n Simple_repeat Simple_repeat 1 41 0 253 356 153 0 chr10 39046389 39046552 -106542736 - L3 LINE CR1 -114 1463 1276 26 30 0 0 chr10 39046561 39046594 -106542694 + AT_rich Low_complexity Low_complexity 1 33 0 585 219 0 0 chr10 39046595 39046718 -106542570 - MLT1A1 LTR MaLR -1 364 242 570 146 10 0 chr10 39046710 39046806 -106542482 - MLT1A1 LTR MaLR -236 129 33 * 360 323 111 5 chr10 39046814 39047012 -106542276 + L2 LINE L2 2234 2452 -862 1859 141 0 14 chr10 39047027 39047317 -106541971 - AluSx SINE Alu -26 286 1 255 287 82 49 chr10 39047433 39047555 -106541733 + L2 LINE L2 3179 3304 -9 198 118 0 0 chr10 39048723 39048757 -106540531 + (CA)n Simple_repeat Simple_repeat 1 34 0 785 272 26 0 chr10 39049500 39049695 -106539593 + MER63A DNA MER1_type 10 209 -1 2627 42 0 0 chr10 39049926 39050237 -106539051 + AluY SINE Alu 1 311 0 207 0 0 0 chr10 39050436 39050459 -106538829 + (A)n Simple_repeat Simple_repeat 1 23 0 2156 122 0 3 chr10 39052361 39052655 -106536633 - AluSg SINE Alu -17 293 1 835 269 72 54 chr10 39052667 39053083 -106536205 - L1MEc LINE L1 -4543 1853 1446 1898 151 34 0 chr10 39053083 39053205 -106536083 + AluSx SINE Alu 1 117 -195 387 0 0 0 chr10 39053205 39053248 -106536040 + (CA)n Simple_repeat Simple_repeat 2 44 0 1898 151 34 0 chr10 39053248 39053417 -106535871 + AluSx SINE Alu 117 302 -10 835 269 72 54 chr10 39053417 39053957 -106535331 - L1MEc LINE L1 -4950 1446 880 1595 114 160 8 chr10 39054178 39054440 -106534848 + AluSg1 SINE Alu 1 302 -7 320 326 42 26 chr10 39054635 39054828 -106534460 - L1MEc LINE L1 -6061 335 140 39 60 0 0 chr10 39055041 39055108 -106534180 + AT_rich Low_complexity Low_complexity 1 67 0 1757 15 0 0 chr10 39055153 39055349 -106533939 - AluYb8 SINE Alu -5 313 118 1360 205 18 21 chr10 39055993 39056276 -106533012 - AluJo SINE Alu -30 282 1 2618 38 0 13 chr10 39056833 39057148 -106532140 + AluY SINE Alu 1 311 0 225 0 0 0 chr10 39057344 39057369 -106531919 + (A)n Simple_repeat Simple_repeat 1 25 0 1218 280 129 35 chr10 39060786 39061586 -106527702 - L1ME3A LINE L1 -14 6156 5282 429 280 194 11 chr10 39063474 39063649 -106525639 + MIR SINE MIR 24 230 -32 255 300 83 17 chr10 39063843 39063963 -106525325 - MIR3 SINE MIR -37 171 44 1743 189 41 15 chr10 39064498 39064762 -106524526 - MER7A DNA MER2_type -2692 346 72 2293 87 0 3 chr10 39064762 39065060 -106524228 + AluY SINE Alu 1 297 -14 1743 189 41 15 chr10 39065060 39065134 -106524154 - MER7A DNA MER2_type -2966 72 1 3489 165 16 39 chr10 39065891 39066587 -106522701 + Tigger1 DNA MER2_type 1 680 -1738 9750 144 21 10 chr10 39066788 39068516 -106520772 + Tigger1 DNA MER2_type 672 2418 0 2224 100 0 44 chr10 39068837 39069157 -106520131 + AluSx SINE Alu 1 306 -6 207 0 0 0 chr10 39070278 39070301 -106518987 + (A)n Simple_repeat Simple_repeat 1 23 0 182 37 37 0 chr10 39071517 39071544 -106517744 + (TC)n Simple_repeat Simple_repeat 1 28 0 261 0 0 0 chr10 39071719 39071748 -106517540 + (TTTA)n Simple_repeat Simple_repeat 1 29 0 893 176 19 0 chr10 39071749 39071908 -106517380 - AluJb SINE Alu -35 277 116 678 226 29 0 chr10 39071920 39072057 -106517231 - FLAM_C SINE Alu -2 141 1 2002 84 4 0 chr10 39072137 39072429 -106516859 - AluSp SINE Alu 0 327 35 2251 43 3 57 chr10 39072463 39072789 -106516499 - AluY SINE Alu 0 310 1 581 294 121 5 chr10 39072884 39073289 -106515999 - L1MC4a LINE L1 -1826 5982 5531 195 69 0 0 chr10 39073322 39073351 -106515937 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 869 155 0 0 chr10 39073351 39073493 -106515795 - L1PA10 LINE L1 -20 6148 6007 199 328 82 25 chr10 39075323 39075445 -106513843 - L2 LINE L2 -41 3231 3103 2072 104 0 4 chr10 39075466 39075745 -106513543 - AluSg SINE Alu -32 278 1 1472 206 11 4 chr10 39075784 39076065 -106513223 + AluJo SINE Alu 5 287 -25 302 98 20 0 chr10 39076070 39076121 -106513167 + (TAGA)n Simple_repeat Simple_repeat 1 52 0 22 35 0 0 chr10 39076703 39076732 -106512556 + AT_rich Low_complexity Low_complexity 1 29 0 2388 55 41 0 chr10 39076840 39077131 -106512157 - AluY SINE Alu -8 303 1 418 319 59 20 chr10 39077155 39077359 -106511929 - MIR SINE MIR -17 245 34 329 200 1 13 chr10 39077729 39077815 -106511473 - L1ME LINE L1 -340 5781 5696 1949 271 61 53 chr10 39077967 39078903 -106510385 - L2 LINE L2 -232 3081 2130 204 344 0 0 chr10 39079042 39079106 -106510182 - MIR SINE MIR -142 120 57 196 296 130 31 chr10 39079325 39079487 -106509801 - MIR SINE MIR -6 256 79 232 306 8 91 chr10 39079695 39079816 -106509472 - MIR3 SINE MIR -97 111 1 2132 81 10 39 chr10 39080437 39080801 -106508487 + AluY SINE Alu 1 311 0 1415 168 82 24 chr10 39080993 39081284 -106508004 + AluJo SINE Alu 1 308 -4 2458 65 7 7 chr10 39081556 39081866 -106507422 + AluY SINE Alu 1 310 -1 2017 94 69 4 chr10 39081880 39081999 -106507289 + AluSx SINE Alu 1 111 -201 222 37 0 0 chr10 39081999 39082026 -106507262 + (TA)n Simple_repeat Simple_repeat 2 28 0 2017 94 69 4 chr10 39082026 39082182 -106507106 + AluSx SINE Alu 111 294 -18 402 294 71 0 chr10 39082430 39082556 -106506732 - MIR SINE MIR -6 256 122 315 0 0 0 chr10 39083014 39083049 -106506239 + (TG)n Simple_repeat Simple_repeat 1 35 0 439 326 54 22 chr10 39083426 39083610 -106505678 - MER115 DNA AcHobo -440 253 64 2680 177 41 0 chr10 39084245 39084809 -106504479 - L1MA4 LINE L1 -5 6295 5709 330 302 8 71 chr10 39085543 39085669 -106503619 - L2 LINE L2 0 3313 3196 2325 82 0 10 chr10 39086524 39086828 -106502460 + AluY SINE Alu 1 301 -10 2425 83 0 0 chr10 39088147 39088448 -106500840 - AluY SINE Alu -10 301 1 2223 75 0 0 chr10 39088456 39088793 -106500495 - AluY SINE Alu 0 339 3 602 236 165 6 chr10 39089038 39089220 -106500068 - MIR SINE MIR -10 252 42 508 317 32 5 chr10 39089263 39089449 -106499839 + MER69 DNA AcHobo 134 324 -2202 700 182 15 35 chr10 39089604 39089724 -106499564 + MER69 DNA AcHobo 2002 2118 -408 2256 85 20 3 chr10 39089724 39090030 -106499258 - AluY SINE Alu 0 311 1 700 182 15 35 chr10 39090030 39090107 -106499181 + MER69 DNA AcHobo 2118 2195 -331 1659 197 55 3 chr10 39090110 39090455 -106498833 + MLT1A1 LTR MaLR 1 363 -2 3913 239 56 7 chr10 39090455 39091766 -106497522 + MLT1A1-int LTR MaLR 3 1370 -281 1596 161 27 7 chr10 39091767 39092065 -106497223 + MLT1A1 LTR MaLR 62 365 0 322 213 155 50 chr10 39092069 39092308 -106496980 + MER69 DNA AcHobo 2198 2461 -65 391 148 23 0 chr10 39092371 39092459 -106496829 + GA-rich Low_complexity Low_complexity 1 90 0 459 260 81 8 chr10 39093047 39093170 -106496118 - L2 LINE L2 0 3313 3182 26 0 0 0 chr10 39093897 39093923 -106495365 + AT_rich Low_complexity Low_complexity 1 26 0 474 166 21 35 chr10 39094037 39094182 -106495106 + GA-rich Low_complexity Low_complexity 4 146 0 806 272 144 32 chr10 39094311 39094823 -106494465 - MLT1G1 LTR MaLR -7 561 1 1156 194 22 117 chr10 39095098 39095501 -106493787 + MLT1A1 LTR MaLR 1 365 0 222 159 0 23 chr10 39095885 39095929 -106493359 + (TAGA)n Simple_repeat Simple_repeat 4 46 0 201 226 0 0 chr10 39096000 39096053 -106493235 + (TATATG)n Simple_repeat Simple_repeat 1 53 0 6700 55 0 12 chr10 39096064 39097030 -106492258 - L1PA5 LINE L1 0 6154 5163 6164 71 0 0 chr10 39097522 39098597 -106490691 - L1PA5 LINE L1 -18 6136 5034 241 359 8 38 chr10 39098606 39098737 -106490551 + L2 LINE L2 2620 2746 -568 2280 85 0 31 chr10 39100845 39101163 -106488125 + AluY SINE Alu 1 308 -3 2348 62 7 10 chr10 39101170 39101478 -106487810 + AluY SINE Alu 1 307 -4 1699 191 24 0 chr10 39101719 39102012 -106487276 + AluJo SINE Alu 1 300 -12 234 150 0 0 chr10 39102281 39102321 -106486967 + (TA)n Simple_repeat Simple_repeat 2 41 0 203 182 55 0 chr10 39102368 39102423 -106486865 + (TA)n Simple_repeat Simple_repeat 1 58 0 330 113 0 0 chr10 39102560 39102622 -106486666 - L1MA7 LINE L1 -1 6290 6229 4284 243 69 55 chr10 39102622 39104711 -106484577 - L1 LINE L1 -2498 3536 1478 1742 123 97 8 chr10 39104711 39104979 -106484309 - AluSg SINE Alu -18 292 1 4284 243 69 55 chr10 39104979 39105486 -106483802 - L1 LINE L1 -4556 1478 980 1035 241 91 19 chr10 39105486 39105806 -106483482 - MER2 DNA MER2_type 0 344 2 4284 243 69 55 chr10 39105806 39106718 -106482570 - L1 LINE L1 -5054 980 359 250 310 151 26 chr10 39106968 39107239 -106482049 - L1M3a LINE L1 -5256 699 395 1159 315 10 12 chr10 39107330 39107743 -106481545 - L1M3a LINE L1 -5532 423 12 362 321 50 9 chr10 39107758 39107976 -106481312 - L1ME LINE L1 -5167 903 677 253 335 129 20 chr10 39108040 39108288 -106481000 + MLT1H LTR MaLR 38 312 -237 2265 43 7 4 chr10 39108538 39108854 -106480434 - AluY SINE Alu 0 317 1 192 97 0 0 chr10 39109256 39109287 -106480001 + (T)n Simple_repeat Simple_repeat 1 31 0 1849 183 21 3 chr10 39109527 39109915 -106479373 - L1MA6 LINE L1 0 6300 5906 2177 221 85 48 chr10 39110028 39110688 -106478600 + MLT1A1-int LTR MaLR 1052 1735 0 1592 221 22 3 chr10 39110688 39111046 -106478242 + MLT1A1 LTR MaLR 1 365 0 25 0 0 0 chr10 39111852 39111877 -106477411 + AT_rich Low_complexity Low_complexity 1 25 0 2358 79 3 7 chr10 39112381 39112685 -106476603 + AluY SINE Alu 1 303 -8 1377 272 10 36 chr10 39113243 39113736 -106475552 + L1ME1 LINE L1 5678 6157 -9 375 323 70 0 chr10 39114269 39114427 -106474861 - MIR SINE MIR -63 199 31 238 331 149 8 chr10 39114545 39114666 -106474622 - MIR3 SINE MIR -67 141 4 54 49 0 0 chr10 39115436 39115518 -106473770 + AT_rich Low_complexity Low_complexity 1 82 0 2300 84 0 3 chr10 39116026 39116322 -106472966 + AluSq SINE Alu 1 295 -18 381 303 133 0 chr10 39116973 39117138 -106472150 - MIR SINE MIR -27 235 49 209 229 21 0 chr10 39117506 39117554 -106471734 + L2 LINE L2 3223 3271 -1 22 0 0 0 chr10 39118024 39118046 -106471242 + AT_rich Low_complexity Low_complexity 1 22 0 495 209 127 0 chr10 39119032 39119142 -106470146 + FLAM_A SINE Alu 1 124 -9 281 430 36 0 chr10 39119159 39119352 -106469936 - L2 LINE L2 -584 2730 2531 2559 193 12 26 chr10 39119356 39119532 -106469756 + L1MB8 LINE L1 4966 5143 -1035 2331 67 40 3 chr10 39119532 39119830 -106469458 + AluY SINE Alu 1 309 -2 2559 193 12 26 chr10 39119830 39120478 -106468810 + L1MB8 LINE L1 5143 5773 -405 1343 111 0 0 chr10 39120492 39120673 -106468615 - AluSq SINE Alu -11 302 122 2168 111 0 7 chr10 39120676 39120982 -106468306 - AluY SINE Alu -5 306 3 1761 149 25 50 chr10 39120984 39121380 -106467908 + L1MB8 LINE L1 5788 6173 -5 2148 107 0 17 chr10 39121977 39122276 -106467012 + AluSq SINE Alu 1 294 -19 2417 28 41 0 chr10 39122529 39122819 -106466469 + AluY SINE Alu 1 302 -9 1938 88 0 0 chr10 39123556 39123806 -106465482 + AluSq SINE Alu 1 250 -63 1433 189 39 4 chr10 39123923 39124204 -106465084 - AluJb SINE Alu -21 291 1 2094 105 14 3 chr10 39124770 39125056 -106464232 + AluSq SINE Alu 1 289 -24 350 132 19 0 chr10 39126052 39126105 -106463183 + AluS SINE Alu 230 283 -17 1776 144 7 7 chr10 39126459 39126737 -106462551 - AluSx SINE Alu -1 311 34 31744 34 113 3 chr10 39126737 39131939 -106457349 + L1PA3 LINE L1 399 6171 0 912 250 119 81 chr10 39132802 39133322 -106455966 + MLT1F LTR MaLR 1 540 -2 21 0 0 0 chr10 39133328 39133349 -106455939 + AT_rich Low_complexity Low_complexity 1 21 0 195 69 0 0 chr10 39133524 39133553 -106455735 + (CAAA)n Simple_repeat Simple_repeat 1 29 0 2448 64 0 3 chr10 39133827 39134123 -106455165 - AluY SINE Alu -16 295 1 272 172 17 0 chr10 39134152 39134210 -106455078 + (TATG)n Simple_repeat Simple_repeat 2 60 0 317 215 0 76 chr10 39134288 39134367 -106454921 + Tigger3(Golem) DNA MER2_type 9 81 -2948 290 119 0 0 chr10 39134416 39134458 -106454830 - AluSg/x SINE Alu -127 173 132 2240 73 0 20 chr10 39134458 39134759 -106454529 - AluY SINE Alu -16 295 1 1436 116 71 22 chr10 39134763 39135030 -106454258 + Tigger3(Golem) DNA MER2_type 2749 3028 -1 243 0 0 0 chr10 39135910 39135937 -106453351 + (TG)n Simple_repeat Simple_repeat 2 28 0 319 324 22 15 chr10 39135971 39136107 -106453181 - LTR16A LTR ERVL -53 397 261 477 171 0 11 chr10 39136142 39136230 -106453058 - L1MCa LINE L1 -5762 664 578 2119 227 53 43 chr10 39136295 39136837 -106452451 - L1MCa LINE L1 -5786 640 90 2484 68 7 0 chr10 39136837 39137145 -106452143 - AluY SINE Alu -1 310 1 2119 227 53 43 chr10 39137145 39137201 -106452087 - L1MCa LINE L1 -6336 90 36 1981 193 0 48 chr10 39137325 39137740 -106451548 + MSTD LTR MaLR 1 395 -1 801 368 28 0 chr10 39137809 39138274 -106451014 - HERV16 LTR ERVL -3604 1392 915 458 361 72 13 chr10 39138413 39138718 -106450570 - HERV16 LTR ERVL -4339 657 335 2340 95 0 10 chr10 39138900 39139204 -106450084 + AluY SINE Alu 1 301 -10 731 287 116 59 chr10 39139364 39139768 -106449520 + LTR16A LTR ERVL 1 427 -30 255 325 133 39 chr10 39139786 39140091 -106449197 - LTR16A1 LTR ERVL -48 409 63 2184 119 0 13 chr10 39140091 39140401 -106448887 - AluSx SINE Alu -1 311 6 255 325 133 39 chr10 39140401 39140455 -106448833 - LTR16A1 LTR ERVL -394 63 16 2068 200 17 137 chr10 39140592 39141512 -106447776 - L1P LINE L1 -2893 3253 2444 5974 127 10 7 chr10 39141534 39142542 -106446746 - L1MA2 LINE L1 0 6304 5294 948 181 5 51 chr10 39142540 39142756 -106446532 - L1MA2 LINE L1 -1977 4169 3964 * 1858 223 8 21 chr10 39142754 39143238 -106446050 - L1P LINE L1 -3699 2447 1970 2889 123 45 0 chr10 39143246 39143717 -106445571 + L1PA15 LINE L1 5672 6163 -2 1906 143 38 58 chr10 39143843 39144208 -106445080 + MLT2D LTR ERVL 1 358 -56 198 71 0 0 chr10 39144221 39144249 -106445039 + (TCTCTG)n Simple_repeat Simple_repeat 3 30 0 291 71 0 0 chr10 39144249 39144291 -106444997 + (TG)n Simple_repeat Simple_repeat 1 42 0 251 294 101 0 chr10 39144294 39144403 -106444885 - L1MCa LINE L1 -5020 1406 1287 2114 98 32 11 chr10 39144435 39144720 -106444568 - AluY SINE Alu -20 291 1 297 95 0 0 chr10 39144769 39144811 -106444477 - U3 snRNA snRNA -175 42 1 485 329 43 30 chr10 39144958 39145286 -106444002 + L1ME3A LINE L1 1905 2236 -4160 637 263 44 10 chr10 39145291 39145588 -106443700 + L1ME3A LINE L1 2340 2646 -3569 852 331 68 27 chr10 39145592 39146005 -106443283 + L1ME3A LINE L1 5576 6023 -216 2217 93 7 13 chr10 39146005 39146306 -106442982 - AluSg SINE Alu -11 299 1 852 331 68 27 chr10 39146306 39146493 -106442795 + L1ME3A LINE L1 6023 6201 -38 2177 120 0 0 chr10 39147223 39147515 -106441773 - AluSx SINE Alu -16 296 5 2247 86 41 0 chr10 39147557 39147847 -106441441 - AluY SINE Alu -9 302 1 351 0 0 0 chr10 39149347 39149386 -106439902 + (CA)n Simple_repeat Simple_repeat 1 39 0 205 379 0 39 chr10 39149630 39149733 -106439555 - MIR3 SINE MIR -96 112 14 2283 176 69 5 chr10 39152337 39152770 -106436518 + LOR1b LTR ERV1 1 461 0 342 284 134 24 chr10 39152953 39153326 -106435962 - L1ME4a LINE L1 -110 6011 5598 397 304 77 28 chr10 39153400 39153581 -106435707 - MIR SINE MIR -11 251 62 1439 230 124 65 chr10 39153620 39154090 -106435198 + MER20B DNA MER1_type 44 570 -213 770 164 0 8 chr10 39154090 39154224 -106435064 + FLAM_C SINE Alu 1 133 0 1439 230 124 65 chr10 39154224 39154444 -106434844 + MER20B DNA MER1_type 570 775 -8 320 218 11 0 chr10 39154662 39154749 -106434539 + (GAATG)n Simple_repeat Simple_repeat 3 90 0 240 235 141 0 chr10 39154765 39154850 -106434438 - MER112 DNA MER1_type -163 97 1 1815 159 75 3 chr10 39155058 39155392 -106433896 + MLT1A1 LTR MaLR 8 365 0 26 0 0 0 chr10 39156022 39156048 -106433240 + AT_rich Low_complexity Low_complexity 1 26 0 1277 221 100 47 chr10 39156783 39157347 -106431941 - L1ME2 LINE L1 -21 6212 5558 2314 100 3 0 chr10 39157347 39157646 -106431642 - AluSp SINE Alu -13 300 1 1277 221 100 47 chr10 39157646 39157671 -106431617 - L1ME2 LINE L1 -675 5558 5536 735 129 8 16 chr10 39157679 39157803 -106431485 + AluY SINE Alu 175 297 -14 1807 252 67 42 chr10 39157829 39158252 -106431036 - L1ME2 LINE L1 -3289 2926 2515 2395 65 0 3 chr10 39158252 39158544 -106430744 - AluY SINE Alu -20 291 1 1807 252 67 42 chr10 39158544 39158928 -106430360 - L1ME2 LINE L1 -3700 2515 2122 354 45 0 0 chr10 39158928 39158972 -106430316 + (TG)n Simple_repeat Simple_repeat 2 45 0 1807 252 67 42 chr10 39158972 39159187 -106430101 - L1ME2 LINE L1 -4093 2122 1914 261 0 0 0 chr10 39161222 39161251 -106428037 + (G)n Simple_repeat Simple_repeat 1 29 0 24 0 0 0 chr10 39261734 39261758 -106327530 + AT_rich Low_complexity Low_complexity 1 24 0 536 267 88 80 chr10 39262501 39262857 -106326431 - HAL1 LINE L1 -269 2238 1872 2279 70 0 30 chr10 39262857 39263155 -106326133 + AluY SINE Alu 1 289 -22 536 267 88 80 chr10 39263155 39263476 -106325812 - HAL1 LINE L1 -635 1872 1555 2112 131 0 3 chr10 39263489 39263794 -106325494 + AluSx SINE Alu 1 304 -8 488 290 138 24 chr10 39263804 39264145 -106325143 + MLT1J2 LTR MaLR 1 380 -70 2204 75 7 3 chr10 39264148 39264463 -106324825 - AluY SINE Alu 0 316 1 2087 96 3 27 chr10 39264568 39264869 -106324419 + AluSc SINE Alu 1 294 -15 1114 180 28 37 chr10 39264932 39265064 -106324224 + AluJo SINE Alu 6 137 -175 207 0 0 0 chr10 39265064 39265087 -106324201 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1114 180 28 37 chr10 39265087 39265171 -106324117 + AluJo SINE Alu 137 220 -92 1910 158 7 0 chr10 39265374 39265665 -106323623 + AluSx SINE Alu 3 295 -17 189 0 0 0 chr10 39265774 39265795 -106323493 + (GA)n Simple_repeat Simple_repeat 2 22 0 189 0 0 0 chr10 39265944 39265965 -106323323 + (GA)n Simple_repeat Simple_repeat 2 22 0 2250 103 3 0 chr10 39266323 39266613 -106322675 + AluSp SINE Alu 3 293 -20 2486 305 60 53 chr10 39266792 39268251 -106321037 + L2 LINE L2 1841 3313 0 2444 70 0 0 chr10 39268547 39268846 -106320442 + AluY SINE Alu 1 299 -12 21 0 0 0 chr10 39268891 39268912 -106320376 + AT_rich Low_complexity Low_complexity 1 21 0 23 78 0 0 chr10 39270120 39270171 -106319117 + AT_rich Low_complexity Low_complexity 1 51 0 258 32 0 0 chr10 39270171 39270202 -106319086 + (GA)n Simple_repeat Simple_repeat 2 32 0 2312 94 0 10 chr10 39270274 39270572 -106318716 - AluY SINE Alu -16 295 1 32 26 0 0 chr10 39270648 39270687 -106318601 + AT_rich Low_complexity Low_complexity 1 39 0 1978 149 7 0 chr10 39271693 39271995 -106317293 - AluSx SINE Alu -8 304 1 25 0 0 0 chr10 39271997 39272022 -106317266 + AT_rich Low_complexity Low_complexity 1 25 0 255 295 13 0 chr10 39272059 39272137 -106317151 + Charlie2 DNA MER1_type 2784 2862 0 2103 111 10 3 chr10 39272343 39272641 -106316647 - AluSx SINE Alu -12 300 1 202 253 192 20 chr10 39272759 39272858 -106316430 + L2 LINE L2 3173 3288 -25 180 308 0 0 chr10 39273060 39273112 -106316176 + L2 LINE L2 3262 3313 0 400 294 153 13 chr10 39273122 39273350 -106315938 + MIR SINE MIR 1 260 -2 2331 78 10 0 chr10 39274020 39274314 -106314974 + AluY SINE Alu 1 297 -14 31 26 0 0 chr10 39274320 39274358 -106314930 + AT_rich Low_complexity Low_complexity 1 38 0 219 267 127 47 chr10 39274631 39274781 -106314507 + L3b LINE CR1 1137 1298 -285 322 320 24 0 chr10 39275367 39275492 -106313796 - L2 LINE L2 0 3313 3186 202 250 0 0 chr10 39277116 39277160 -106312128 + A-rich Low_complexity Low_complexity 1 44 0 290 26 26 0 chr10 39278086 39278125 -106311163 + (TG)n Simple_repeat Simple_repeat 2 41 0 303 202 24 0 chr10 39280469 39280553 -106308735 + Charlie2 DNA MER1_type 2287 2372 -490 2090 146 37 37 chr10 39280656 39281213 -106308075 - MLT2A2 LTR ERVL 0 554 1 530 178 13 53 chr10 39281213 39281364 -106307924 + Charlie2 DNA MER1_type 2463 2607 -255 651 217 190 0 chr10 39282809 39282993 -106306295 + MER20 DNA MER1_type 1 219 0 1070 190 40 117 chr10 39283082 39283477 -106305811 + MLT1A1 LTR MaLR 1 365 0 2208 118 0 0 chr10 39284837 39285134 -106304154 - AluSg SINE Alu -11 299 3 217 200 15 77 chr10 39285137 39285155 -106304133 + MIR SINE MIR 98 116 -146 1949 174 0 7 chr10 39285155 39285454 -106303834 - AluSx SINE Alu -15 297 1 217 200 15 77 chr10 39285454 39285500 -106303788 + MIR SINE MIR 116 158 -104 186 43 0 0 chr10 39285535 39285558 -106303730 + (CA)n Simple_repeat Simple_repeat 2 24 0 454 183 63 80 chr10 39286191 39286366 -106302922 + MER53 DNA DNA 5 176 -13 311 230 11 1 chr10 39286402 39286491 -106302797 - MLT1J1 LTR MaLR 0 446 363 225 178 110 27 chr10 39286714 39286787 -106302501 - MLT1J2 LTR MaLR -371 79 1 4806 89 21 44 chr10 39287051 39287549 -106301739 - L1PA11 LINE L1 0 6174 5666 2294 95 0 0 chr10 39287549 39287845 -106301443 - AluY SINE Alu -11 300 5 4806 89 21 44 chr10 39287845 39288020 -106301268 - L1PA11 LINE L1 -508 5666 5519 2233 129 0 0 chr10 39288020 39288323 -106300965 - AluSx SINE Alu -9 303 1 4806 89 21 44 chr10 39288323 39288444 -106300844 - L1PA11 LINE L1 -655 5519 5397 2222 85 0 0 chr10 39288804 39289113 -106300175 + AluY SINE Alu 1 309 0 22 0 0 0 chr10 39290014 39290036 -106299252 + AT_rich Low_complexity Low_complexity 1 22 0 207 136 23 23 chr10 39290352 39290396 -106298892 + CT-rich Low_complexity Low_complexity 1 44 0 1168 209 15 116 chr10 39291035 39291441 -106297847 + MLT1A1 LTR MaLR 1 365 0 588 316 39 19 chr10 39291488 39291694 -106297594 - MIR SINE MIR -31 231 22 351 144 0 7 chr10 39291933 39292031 -106297257 - Alu SINE Alu 0 302 134 2476 70 3 0 chr10 39292031 39292333 -106296955 - AluSp SINE Alu -10 303 1 366 176 14 0 chr10 39293775 39293849 -106295439 + MER103 DNA DNA 40 114 -52 2018 137 44 22 chr10 39294319 39294684 -106294604 + THE1C LTR MaLR 1 373 -2 2379 50 0 3 chr10 39296149 39296479 -106292809 - AluY SINE Alu 0 329 1 198 0 0 0 chr10 39296479 39296501 -106292787 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2025 111 4 4 chr10 39296501 39296780 -106292508 - AluSc SINE Alu -30 279 1 271 310 0 0 chr10 39297339 39297397 -106291891 - MER91 DNA MER1_type -81 59 2 1234 168 0 42 chr10 39297549 39297787 -106291501 - L1MC1 LINE L1 -17 6316 6089 2017 133 14 3 chr10 39298223 39298517 -106290771 + AluSg SINE Alu 1 297 -13 1163 154 46 10 chr10 39298607 39298832 -106290456 + AluSg/x SINE Alu 83 314 0 2759 173 7 9 chr10 39298903 39299459 -106289829 + L1MA5 LINE L1 5746 6300 0 2132 256 204 23 chr10 39300312 39300456 -106288832 + L1MC4 LINE L1 6459 6576 -1466 2259 96 7 3 chr10 39300456 39300758 -106288530 - AluSc SINE Alu -6 303 1 2132 256 204 23 chr10 39300758 39301539 -106287749 + L1MC4 LINE L1 6576 7214 -828 656 214 0 24 chr10 39301539 39301665 -106287623 + FLAM_A SINE Alu 1 123 -10 2132 256 204 23 chr10 39301665 39301960 -106287328 + L1MC4 LINE L1 7214 7901 -141 248 160 0 0 chr10 39301961 39302011 -106287277 + L1MC4 LINE L1 7989 8038 -4 2072 111 0 42 chr10 39302034 39302341 -106286947 + AluSx SINE Alu 5 298 -14 749 290 81 76 chr10 39302748 39303363 -106285925 + L2 LINE L2 2538 3168 -145 336 287 81 0 chr10 39303425 39303561 -106285727 + L1ME LINE L1 28 174 -5896 2265 115 0 10 chr10 39303567 39304033 -106285255 - AluY SINE Alu 0 463 1 770 165 17 11 chr10 39304033 39304209 -106285079 + CT-rich Low_complexity Low_complexity 3 179 0 266 163 11 43 chr10 39304226 39304318 -106284970 + CT-rich Low_complexity Low_complexity 3 91 0 424 235 31 0 chr10 39304373 39304471 -106284817 + L1ME LINE L1 438 538 -5532 763 256 96 82 chr10 39304486 39304875 -106284413 + L1ME LINE L1 676 1058 -5061 2261 100 7 0 chr10 39304875 39305176 -106284112 + AluY SINE Alu 1 303 -8 763 256 96 82 chr10 39305176 39306003 -106283285 + L1ME LINE L1 1058 1941 -4178 2215 125 0 0 chr10 39306014 39306319 -106282969 + AluSg SINE Alu 1 305 -5 1716 122 6 113 chr10 39306327 39306707 -106282581 + AluSg SINE Alu 1 344 0 2092 122 0 7 chr10 39306712 39307008 -106282280 + AluSc SINE Alu 1 294 -15 242 262 49 18 chr10 39307010 39307174 -106282114 + L1ME LINE L1 1909 2077 -4003 26 50 0 0 chr10 39307187 39307227 -106282061 + AT_rich Low_complexity Low_complexity 1 40 0 286 276 62 14 chr10 39307245 39307390 -106281898 + L1ME LINE L1 2110 2261 -3819 2279 79 3 20 chr10 39307394 39307698 -106281590 + AluY SINE Alu 1 299 -12 2380 277 70 38 chr10 39307708 39308891 -106280397 + L1ME LINE L1 3066 4314 -1766 311 0 0 22 chr10 39308891 39308937 -106280351 + L1PA2 LINE L1 6108 6152 -3 2380 277 70 38 chr10 39308937 39309333 -106279955 + L1ME LINE L1 4314 4696 -1384 2388 66 0 31 chr10 39309344 39309663 -106279625 - AluY SINE Alu -2 309 1 278 326 12 0 chr10 39309690 39309776 -106279512 + MIR SINE MIR 65 151 -111 22 35 0 0 chr10 39309812 39309841 -106279447 + AT_rich Low_complexity Low_complexity 1 29 0 2271 87 20 0 chr10 39310095 39310394 -106278894 - AluY SINE Alu -6 305 1 670 263 38 6 chr10 39312138 39312298 -106276990 + MER5A DNA MER1_type 1 165 -24 1870 214 47 69 chr10 39312307 39312929 -106276359 + MLT1E2 LTR MaLR 18 625 -1 21 57 0 0 chr10 39313230 39313265 -106276023 + AT_rich Low_complexity Low_complexity 1 35 0 2505 58 0 0 chr10 39313265 39313558 -106275730 - AluY SINE Alu -18 293 1 210 312 152 0 chr10 39313559 39313684 -106275604 + MIR SINE MIR 104 247 -15 285 266 185 17 chr10 39313752 39313925 -106275363 - LTR16A1 LTR ERVL 0 457 256 2374 77 7 10 chr10 39314199 39314498 -106274790 - AluSp SINE Alu -15 298 1 21 36 0 0 chr10 39316728 39316756 -106272532 + AT_rich Low_complexity Low_complexity 1 28 0 1886 167 16 8 chr10 39316763 39317147 -106272141 - L1MA4 LINE L1 -9 6291 5905 25 0 0 0 chr10 39318663 39318688 -106270600 + AT_rich Low_complexity Low_complexity 1 25 0 3378 183 19 4 chr10 39320109 39320786 -106268502 - L1PA16 LINE L1 -16 6150 5464 2037 123 33 3 chr10 39320816 39321116 -106268172 + AluSc SINE Alu 1 309 0 455 286 78 10 chr10 39321772 39321965 -106267323 + MIR SINE MIR 39 250 -12 1985 97 87 7 chr10 39323088 39323377 -106265911 - AluSx SINE Alu 0 312 1 698 125 70 7 chr10 39323461 39323627 -106265661 + L1MA9 LINE L1 6110 6311 -1 850 284 0 0 chr10 39324159 39324381 -106264907 + Charlie1 DNA MER1_type 1 222 -2539 580 212 15 0 chr10 39324380 39324517 -106264771 + Charlie1 DNA MER1_type 2622 2760 -1 * 2146 138 0 10 chr10 39324683 39324994 -106264294 - AluSg SINE Alu -2 308 1 22 35 0 0 chr10 39325301 39325330 -106263958 + AT_rich Low_complexity Low_complexity 1 29 0 2414 172 16 31 chr10 39327180 39327278 -106262010 - L1MC1 LINE L1 -13 6320 6222 2220 77 3 0 chr10 39327278 39327605 -106261683 - AluSp SINE Alu 0 328 1 2414 172 16 31 chr10 39327605 39328022 -106261266 - L1MC1 LINE L1 -111 6222 5812 2040 145 0 0 chr10 39329118 39329407 -106259881 + AluSg SINE Alu 1 289 -21 23 0 0 0 chr10 39329440 39329463 -106259825 + AT_rich Low_complexity Low_complexity 1 23 0 2370 90 3 3 chr10 39329638 39329949 -106259339 - AluY SINE Alu 0 311 1 2351 83 0 0 chr10 39330153 39330455 -106258833 + AluY SINE Alu 2 303 -8 470 290 88 20 chr10 39331481 39331822 -106257466 - L1MCc LINE L1 -4893 1530 1167 2173 119 3 10 chr10 39332388 39332700 -106256588 - AluSx SINE Alu -2 310 1 271 333 36 23 chr10 39332734 39332953 -106256335 - L1MCc LINE L1 -6180 243 22 489 310 88 41 chr10 39333141 39333560 -106255728 - L1MEc LINE L1 -4574 1822 1384 23 0 0 0 chr10 39334637 39334660 -106254628 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr10 39335044 39335069 -106254219 + AT_rich Low_complexity Low_complexity 1 25 0 2383 67 0 32 chr10 39335199 39335512 -106253776 + AluY SINE Alu 1 303 -8 24 0 0 0 chr10 39337356 39337380 -106251908 + AT_rich Low_complexity Low_complexity 1 24 0 26 0 0 0 chr10 39338856 39338882 -106250406 + AT_rich Low_complexity Low_complexity 1 26 0 418 255 0 0 chr10 39338962 39339060 -106250228 - MER58 DNA MER1_type -4 2416 2319 424 260 21 0 chr10 39339072 39339168 -106250120 - MER58 DNA MER1_type -241 100 3 2332 73 0 3 chr10 39339244 39339544 -106249744 - AluY SINE Alu -12 299 1 212 296 93 0 chr10 39339601 39339655 -106249633 + L2 LINE L2 3206 3264 -8 23 0 0 0 chr10 39339859 39339882 -106249406 + AT_rich Low_complexity Low_complexity 1 23 0 1824 162 3 0 chr10 39339882 39340179 -106249109 - AluSx SINE Alu -14 298 1 323 254 13 9 chr10 39340722 39340948 -106248340 + CT-rich Low_complexity Low_complexity 1 227 0 1851 178 7 47 chr10 39341754 39341991 -106247297 - MLT1B LTR MaLR 0 390 174 2228 114 55 0 chr10 39341991 39342334 -106246954 - THE1B LTR MaLR 0 364 3 1851 178 7 47 chr10 39342334 39342501 -106246787 - MLT1B LTR MaLR -216 174 2 2377 85 3 0 chr10 39343021 39343316 -106245972 - AluY SINE Alu -15 296 1 21 57 0 0 chr10 39343321 39343356 -106245932 + AT_rich Low_complexity Low_complexity 1 35 0 321 261 79 61 chr10 39343775 39343940 -106245348 - MLT1K LTR MaLR -26 562 395 180 125 0 0 chr10 39344030 39344062 -106245226 + (TC)n Simple_repeat Simple_repeat 2 33 0 609 193 30 52 chr10 39344341 39344476 -106244812 - FLAM_A SINE Alu 0 133 2 2461 82 0 0 chr10 39344750 39345053 -106244235 + AluY SINE Alu 1 303 -8 201 74 0 0 chr10 39345177 39345204 -106244084 + (TG)n Simple_repeat Simple_repeat 1 27 0 581 156 0 90 chr10 39345686 39345808 -106243480 - HY1 scRNA scRNA -1 111 1 2075 125 16 13 chr10 39346275 39346586 -106242702 + AluSx SINE Alu 1 312 0 360 283 0 17 chr10 39346588 39346708 -106242580 + MLT1H LTR MaLR 91 208 -341 24 53 0 0 chr10 39346847 39346885 -106242403 + AT_rich Low_complexity Low_complexity 1 38 0 21 36 0 0 chr10 39347145 39347173 -106242115 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr10 39347230 39347251 -106242037 + AT_rich Low_complexity Low_complexity 1 21 0 2307 77 0 0 chr10 39347254 39347540 -106241748 + AluY SINE Alu 1 286 -25 2346 83 0 29 chr10 39348089 39348403 -106240885 + AluY SINE Alu 1 305 -6 1352 199 106 9 chr10 39348604 39348935 -106240353 + MLT1A1 LTR MaLR 1 363 -2 2628 51 0 0 chr10 39350744 39351055 -106238233 - AluY SINE Alu 0 311 1 1604 193 78 49 chr10 39351347 39351426 -106237862 + MER101 LTR ERV1 11 86 -388 2243 79 0 7 chr10 39351426 39351729 -106237559 + AluY SINE Alu 1 301 -10 1604 193 78 49 chr10 39351729 39352100 -106237188 + MER101 LTR ERV1 86 474 0 207 0 0 0 chr10 39352622 39352645 -106236643 + (TA)n Simple_repeat Simple_repeat 1 23 0 234 198 0 41 chr10 39352668 39352688 -106236600 + (TA)n Simple_repeat Simple_repeat 1 20 -96 1452 135 0 5 chr10 39352688 39352895 -106236393 + AluSg/x SINE Alu 82 287 -23 234 198 0 41 chr10 39352895 39352995 -106236293 + (TA)n Simple_repeat Simple_repeat 20 116 0 299 304 0 7 chr10 39353010 39353145 -106236143 + (TA)n Simple_repeat Simple_repeat 1 134 0 222 191 0 0 chr10 39353152 39353199 -106236089 + (TATG)n Simple_repeat Simple_repeat 2 48 0 405 0 0 0 chr10 39353407 39353452 -106235836 + (TA)n Simple_repeat Simple_repeat 2 46 0 2364 107 3 0 chr10 39353459 39353768 -106235520 - AluSg SINE Alu 0 310 1 1713 173 45 8 chr10 39353777 39354159 -106235129 - L1MB3 LINE L1 -3 6180 5785 261 211 0 0 chr10 39354170 39354227 -106235061 + (TATG)n Simple_repeat Simple_repeat 4 60 0 2245 107 0 7 chr10 39354256 39354555 -106234733 - AluSg SINE Alu -13 297 1 320 235 59 29 chr10 39354675 39354777 -106234511 - L2 LINE L2 0 3313 3209 180 0 0 0 chr10 39355021 39355041 -106234247 + (TA)n Simple_repeat Simple_repeat 2 21 0 29 60 0 0 chr10 39356287 39356337 -106232951 + AT_rich Low_complexity Low_complexity 1 50 0 1830 109 3 25 chr10 39356424 39356707 -106232581 + AluSc SINE Alu 1 277 -32 243 0 0 0 chr10 39356709 39356736 -106232552 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 246 347 27 24 chr10 39356882 39357176 -106232112 + MARNA DNA Mariner 244 538 -48 405 0 0 0 chr10 39357276 39357321 -106231967 + (TA)n Simple_repeat Simple_repeat 1 45 0 2364 107 3 0 chr10 39357328 39357637 -106231651 - AluSg SINE Alu 0 310 1 1713 173 45 8 chr10 39357646 39358028 -106231260 - L1MB3 LINE L1 -3 6180 5785 261 211 0 0 chr10 39358039 39358096 -106231192 + (TATG)n Simple_repeat Simple_repeat 4 60 0 2245 107 0 7 chr10 39358125 39358424 -106230864 - AluSg SINE Alu -13 297 1 320 235 59 29 chr10 39358544 39358646 -106230642 - L2 LINE L2 0 3313 3209 180 0 0 0 chr10 39358890 39358910 -106230378 + (TA)n Simple_repeat Simple_repeat 2 21 0 2479 185 61 17 chr10 39359279 39359981 -106229307 + L1M3 LINE L1 5053 5789 -394 678 233 0 10 chr10 39360017 39360210 -106229078 + L1M4 LINE L1 4762 4952 -1194 1702 222 20 10 chr10 39360252 39360762 -106228526 + L1M4 LINE L1 2497 3011 -3135 1403 195 8 16 chr10 39360764 39361015 -106228273 + AluJo SINE Alu 40 288 -24 252 282 19 10 chr10 39361031 39361134 -106228154 + L1M4 LINE L1 3035 3138 -3008 2522 58 10 3 chr10 39361261 39361570 -106227718 - AluY SINE Alu 0 311 1 2296 75 0 10 chr10 39361582 39361877 -106227411 - AluY SINE Alu -19 292 1 1868 255 78 66 chr10 39361878 39362804 -106226484 + L1M4 LINE L1 3392 4336 -1810 2104 106 3 0 chr10 39362804 39363138 -106226150 + AluSx SINE Alu 1 335 0 1868 255 78 66 chr10 39363138 39363295 -106225993 + L1M4 LINE L1 4336 4490 -1656 2439 78 0 0 chr10 39363298 39363605 -106225683 + AluY SINE Alu 4 310 -1 2168 139 0 0 chr10 39363773 39364083 -106225205 - AluSx SINE Alu -2 310 1 1985 135 17 3 chr10 39364092 39364388 -106224900 - AluSg SINE Alu -10 300 1 513 267 111 33 chr10 39364433 39364793 -106224495 + L1M4 LINE L1 3060 3447 -2699 2178 115 6 13 chr10 39364796 39365109 -106224179 + AluSx SINE Alu 1 311 -1 230 81 27 0 chr10 39365113 39365150 -106224138 + (GAA)n Simple_repeat Simple_repeat 1 38 0 2112 71 0 51 chr10 39365163 39365482 -106223806 + AluY SINE Alu 2 305 0 1143 244 11 78 chr10 39365534 39366058 -106223230 + L1M4 LINE L1 3485 3973 -2173 640 243 114 64 chr10 39366799 39367157 -106222131 - MLT1J1 LTR MaLR 0 446 71 5946 137 38 20 chr10 39367234 39368445 -106220843 + L1PB1 LINE L1 4413 5601 -550 2218 114 3 3 chr10 39368445 39368752 -106220536 + AluSx SINE Alu 1 307 -5 5946 137 38 20 chr10 39368752 39368768 -106220520 + L1PB1 LINE L1 5601 5615 -536 2283 89 0 3 chr10 39368768 39369060 -106220228 + AluSc SINE Alu 1 291 -18 5946 137 38 20 chr10 39369060 39369525 -106219763 + L1PB1 LINE L1 5615 6146 -5 191 163 0 82 chr10 39369763 39369812 -106219476 - MIR3 SINE MIR -7 201 157 1295 172 42 135 chr10 39369904 39370334 -106218954 - MLT1B LTR MaLR 0 390 1 1300 223 28 16 chr10 39370334 39370652 -106218636 - MLT1B-int LTR MaLR 0 1735 1414 431 226 43 0 chr10 39370647 39370740 -106218548 - MLT1B-int LTR MaLR -270 1101 1005 * 2547 242 22 6 chr10 39370750 39371535 -106217753 + L1 LINE L1 2473 3269 -2877 1415 151 28 21 chr10 39371541 39371832 -106217456 + L1 LINE L1 3861 4153 -1993 2177 126 3 3 chr10 39371948 39372250 -106217038 - AluSg SINE Alu -8 302 1 822 290 79 64 chr10 39372652 39373165 -106216123 - L2 LINE L2 0 3313 2733 2127 120 0 7 chr10 39373165 39373464 -106215824 - AluSc SINE Alu -12 297 1 822 290 79 64 chr10 39373464 39373727 -106215561 - L2 LINE L2 -580 2733 2475 190 348 11 43 chr10 39374173 39374265 -106215023 + MIR SINE MIR 43 131 -131 188 290 58 0 chr10 39374392 39374461 -106214827 - L3 LINE CR1 0 1577 1505 1957 131 0 20 chr10 39375786 39376092 -106213196 + AluSx SINE Alu 1 300 -12 182 366 14 0 chr10 39376363 39376434 -106212854 - L2 LINE L2 0 3272 3201 2357 87 0 10 chr10 39376693 39376992 -106212296 - AluY SINE Alu -15 296 1 27 81 0 0 chr10 39377088 39377150 -106212138 + AT_rich Low_complexity Low_complexity 1 62 0 630 172 74 25 chr10 39377182 39377304 -106211984 + FLAM_C SINE Alu 5 132 -11 220 327 167 6 chr10 39377372 39377534 -106211754 - MIR SINE MIR -70 192 5 203 288 68 0 chr10 39377612 39377671 -106211617 - L3 LINE CR1 -2 1575 1513 265 125 0 0 chr10 39377855 39377895 -106211393 + AluS SINE Alu 22 61 -240 898 160 7 0 chr10 39377895 39378045 -106211243 + AluSp/q SINE Alu 159 309 -4 470 113 0 12 chr10 39378683 39378763 -106210525 + MADE1 DNA Mariner 2 80 0 802 82 0 0 chr10 39378871 39378969 -106210319 + AluY SINE Alu 199 296 -15 1712 121 4 0 chr10 39379144 39379375 -106209913 + AluSq SINE Alu 22 253 -60 303 333 123 9 chr10 39379687 39379801 -106209487 - MIR3 SINE MIR -48 160 34 243 61 0 0 chr10 39381436 39381469 -106207819 + (TG)n Simple_repeat Simple_repeat 1 33 0 268 330 54 9 chr10 39381967 39382079 -106207209 + MIR SINE MIR 21 137 -71 22 0 0 0 chr10 39382217 39382239 -106207049 + AT_rich Low_complexity Low_complexity 1 22 0 2120 120 30 0 chr10 39382371 39382672 -106206616 + AluSx SINE Alu 3 312 0 360 281 39 31 chr10 39382933 39383061 -106206227 - L2 LINE L2 0 3313 3185 317 237 21 11 chr10 39383089 39383182 -106206106 + (TA)n Simple_repeat Simple_repeat 1 94 0 227 200 0 83 chr10 39383184 39383244 -106206044 + Tigger5 DNA MER2_type 1 55 -2268 331 213 25 12 chr10 39383254 39383334 -106205954 + Tigger5 DNA MER2_type 2237 2317 -6 2315 92 0 0 chr10 39383344 39383636 -106205652 + AluSg SINE Alu 2 293 -17 1257 291 129 17 chr10 39383754 39384504 -106204784 - L2 LINE L2 -229 3084 2251 659 203 19 61 chr10 39384648 39384860 -106204428 + L1MA8 LINE L1 6086 6288 -3 277 209 143 11 chr10 39385273 39385364 -106203924 + MIR SINE MIR 46 148 -114 1981 189 35 16 chr10 39388324 39388748 -106200540 + Tigger2a DNA MER2_type 3 434 0 2204 104 3 0 chr10 39388788 39389097 -106200191 + AluSg SINE Alu 1 310 0 368 179 34 0 chr10 39389760 39389877 -106199411 + (TA)n Simple_repeat Simple_repeat 2 122 0 2236 103 7 3 chr10 39389921 39390231 -106199057 - AluSq SINE Alu -2 311 1 27 29 0 0 chr10 39390231 39390265 -106199023 + AT_rich Low_complexity Low_complexity 1 34 0 583 107 83 0 chr10 39390285 39390528 -106198760 + (TA)n Simple_repeat Simple_repeat 1 263 0 244 246 14 14 chr10 39391213 39391282 -106198006 + GA-rich Low_complexity Low_complexity 2 70 0 190 330 127 21 chr10 39391809 39392045 -106197243 - L2 LINE L2 -1232 2082 1822 415 312 75 14 chr10 39392084 39392443 -106196845 + L1ME LINE L1 5318 5698 -472 913 42 17 0 chr10 39392511 39392631 -106196657 + L1PA8 LINE L1 6049 6170 -2 1379 277 27 16 chr10 39392876 39393388 -106195900 + L1MCb LINE L1 46 563 -5482 2410 238 67 22 chr10 39393415 39394143 -106195145 + L1MD1 LINE L1 18 778 -5762 3929 216 60 19 chr10 39394164 39394914 -106194374 + L1MD1 LINE L1 878 1695 -4845 2278 107 0 0 chr10 39394914 39395213 -106194075 + AluSq SINE Alu 1 299 -14 3929 216 60 19 chr10 39395213 39395629 -106193659 + L1MD1 LINE L1 1695 2092 -4448 1546 251 63 48 chr10 39395637 39395775 -106193513 + MER76 LTR ERV 4 138 -550 2059 113 7 0 chr10 39395775 39396078 -106193210 - AluY SINE Alu 0 305 1 1546 251 63 48 chr10 39396078 39396551 -106192737 + MER76 LTR ERV 138 624 -64 3434 173 54 36 chr10 39396551 39397362 -106191926 + LTR1B LTR ERV1 1 826 0 1546 251 63 48 chr10 39397362 39397428 -106191860 + MER76 LTR ERV 624 688 0 1450 195 56 134 chr10 39397434 39397785 -106191503 + L1MD1 LINE L1 2113 2490 -4050 2579 42 7 0 chr10 39397785 39398092 -106191196 + AluY SINE Alu 1 309 -2 1450 195 56 134 chr10 39398092 39398464 -106190824 + L1MD1 LINE L1 2490 2890 -3650 2144 112 0 0 chr10 39398464 39398750 -106190538 - AluSc SINE Alu -23 286 1 1450 195 56 134 chr10 39398750 39399346 -106189942 + L1MD1 LINE L1 2890 3350 -3190 * 3085 226 42 59 chr10 39399344 39400008 -106189280 + L1MD1 LINE L1 5080 5754 -882 2088 146 0 0 chr10 39400008 39400309 -106188979 + AluSx SINE Alu 1 301 -11 3085 226 42 59 chr10 39400309 39400532 -106188756 + L1MD1 LINE L1 5754 5979 -657 2080 122 3 0 chr10 39400532 39400847 -106188441 - AluSq SINE Alu 0 316 1 3085 226 42 59 chr10 39400847 39401516 -106187772 + L1MD1 LINE L1 5979 6622 -14 2250 104 0 3 chr10 39401530 39401829 -106187459 + AluSc SINE Alu 1 298 -11 1864 251 59 64 chr10 39401913 39402135 -106187153 + L1MCb LINE L1 551 773 -5791 2261 95 0 3 chr10 39402135 39402429 -106186859 - AluY SINE Alu -18 293 1 1864 251 59 64 chr10 39402429 39402819 -106186469 + L1MCb LINE L1 773 1163 -5401 2208 127 0 0 chr10 39402819 39403110 -106186178 + AluSx SINE Alu 1 291 -21 1864 251 59 64 chr10 39403110 39404192 -106185096 + L1MCb LINE L1 1163 2249 -4315 1618 188 32 0 chr10 39404192 39404474 -106184814 - AluSx SINE Alu -21 291 1 1864 251 59 64 chr10 39404474 39404943 -106184345 + L1MCb LINE L1 2249 2719 -3845 2222 119 0 0 chr10 39404943 39405237 -106184051 + AluSg SINE Alu 1 294 -16 1864 251 59 64 chr10 39405237 39405720 -106183568 + L1MCb LINE L1 2719 3381 -3183 1986 171 0 0 chr10 39405720 39406025 -106183263 + AluSx SINE Alu 1 305 -7 1864 251 59 64 chr10 39406025 39406164 -106183124 + L1MCb LINE L1 3381 3519 -3045 2406 100 7 0 chr10 39406164 39406465 -106182823 + AluSq SINE Alu 1 303 -10 2244 111 3 0 chr10 39406681 39406978 -106182310 - AluSp SINE Alu -15 298 1 232 174 22 0 chr10 39408575 39408621 -106180667 + (TG)n Simple_repeat Simple_repeat 1 47 0 2586 48 0 10 chr10 39409239 39409553 -106179735 + AluY SINE Alu 1 311 0 430 228 18 23 chr10 39410992 39411112 -106178176 - MLT1J2 LTR MaLR -258 151 37 745 257 6 6 chr10 39411224 39411407 -106177881 - MER58A DNA MER1_type 0 224 42 1992 124 11 0 chr10 39411407 39411690 -106177598 + AluSx SINE Alu 1 286 -26 2352 84 3 0 chr10 39411699 39411996 -106177292 + AluY SINE Alu 1 298 -13 22 80 0 0 chr10 39412743 39412793 -106176495 + AT_rich Low_complexity Low_complexity 1 50 0 2259 118 0 0 chr10 39412990 39413287 -106176001 + AluSg SINE Alu 1 297 -13 2244 86 3 23 chr10 39413409 39413713 -106175575 + AluY SINE Alu 1 298 -13 3355 139 191 11 chr10 39414541 39415241 -106174047 + LTR1B LTR ERV1 1 826 0 23 0 0 0 chr10 39416055 39416078 -106173210 + AT_rich Low_complexity Low_complexity 1 23 0 520 241 38 19 chr10 39416310 39416468 -106172820 + MER45A DNA AcHobo 1 161 -17 2237 233 84 9 chr10 39417667 39418349 -106170939 - L1PB4 LINE L1 -843 5303 4571 * 2398 158 13 4 chr10 39418345 39418813 -106170475 + L1PB4 LINE L1 5314 5785 -371 261 226 40 16 chr10 39418815 39418939 -106170349 + (TA)n Simple_repeat Simple_repeat 2 128 0 556 106 0 32 chr10 39418939 39419033 -106170255 + L1PB4 LINE L1 5775 5865 -291 606 90 0 0 chr10 39419034 39419123 -106170165 - AluSc SINE Alu -6 303 215 612 198 0 8 chr10 39419123 39419249 -106170039 + L1PB4 LINE L1 6027 6151 -5 2089 98 7 26 chr10 39419442 39419748 -106169540 + AluSx SINE Alu 3 302 -10 2026 134 0 3 chr10 39419768 39420076 -106169212 + AluSq SINE Alu 1 307 0 2421 72 0 3 chr10 39420135 39420440 -106168848 + AluY SINE Alu 1 304 -7 399 284 151 32 chr10 39420465 39420802 -106168486 + L1MCa LINE L1 1203 1978 -4448 556 164 8 16 chr10 39421806 39421928 -106167360 - L1MA6 LINE L1 -474 5826 5706 2185 144 32 21 chr10 39421931 39422368 -106166920 + L1MA6 LINE L1 5856 6297 -3 2281 76 0 3 chr10 39422378 39422666 -106166622 + AluY SINE Alu 1 287 -24 279 0 0 0 chr10 39422682 39422713 -106166575 + (TG)n Simple_repeat Simple_repeat 2 32 0 1431 212 14 7 chr10 39422810 39423098 -106166190 + AluJo SINE Alu 1 290 -22 475 164 35 0 chr10 39423284 39423400 -106165888 + L1M4 LINE L1 3129 3248 -2898 515 326 11 4 chr10 39423553 39423820 -106165468 + L1M4 LINE L1 4519 4787 -1359 308 301 65 0 chr10 39423867 39423960 -106165328 + L1M4 LINE L1 4795 4893 -1253 2451 78 0 0 chr10 39423967 39424273 -106165015 - AluY SINE Alu -2 309 4 1868 255 78 66 chr10 39424276 39424433 -106164855 - L1M4 LINE L1 -1656 4490 4336 2103 106 3 0 chr10 39424433 39424767 -106164521 - AluSx SINE Alu 0 335 1 1868 255 78 66 chr10 39424767 39425693 -106163595 - L1M4 LINE L1 -1810 4336 3392 2296 75 0 10 chr10 39425694 39425989 -106163299 + AluY SINE Alu 1 292 -19 2522 58 10 3 chr10 39426001 39426310 -106162978 + AluY SINE Alu 1 311 0 252 282 19 10 chr10 39426437 39426540 -106162748 - L1M4 LINE L1 -3008 3138 3035 1389 199 8 16 chr10 39426556 39426807 -106162481 - AluJo SINE Alu -24 288 40 1702 222 20 10 chr10 39426809 39427319 -106161969 - L1M4 LINE L1 -3135 3011 2497 678 233 0 10 chr10 39427361 39427554 -106161734 - L1M4 LINE L1 -1194 4952 4762 2073 121 0 4 chr10 39427700 39427973 -106161315 - AluSx SINE Alu -22 290 19 192 308 164 27 chr10 39428228 39428374 -106160914 + MIR3 SINE MIR 12 177 -31 214 276 0 46 chr10 39428402 39428489 -106160799 - L2 LINE L2 -59 3254 3172 2298 97 3 0 chr10 39429913 39430213 -106159075 - AluY SINE Alu -10 301 1 566 102 0 34 chr10 39430716 39430834 -106158454 + (GGAA)n Simple_repeat Simple_repeat 2 115 0 343 0 43 0 chr10 39431216 39431263 -106158025 + (TC)n Simple_repeat Simple_repeat 2 50 0 1685 271 134 6 chr10 39431603 39432534 -106156754 - L1ME3A LINE L1 -30 6140 5089 234 0 0 0 chr10 39432558 39432584 -106156704 + (TTTA)n Simple_repeat Simple_repeat 1 26 0 2448 98 0 0 chr10 39433413 39433719 -106155569 - AluSc SINE Alu -3 306 1 2377 53 3 13 chr10 39433728 39434027 -106155261 - AluY SINE Alu -15 296 1 26 30 0 0 chr10 39434033 39434066 -106155222 + AT_rich Low_complexity Low_complexity 1 33 0 1244 222 22 0 chr10 39434072 39434342 -106154946 - AluJo SINE Alu -36 276 1 2386 76 7 3 chr10 39434480 39434784 -106154504 + AluSg SINE Alu 1 305 -5 2397 59 3 3 chr10 39435373 39435680 -106153608 - AluY SINE Alu -4 307 1 597 28 0 0 chr10 39436162 39436233 -106153055 + (CA)n Simple_repeat Simple_repeat 2 72 0 25 51 0 0 chr10 39436613 39436652 -106152636 + AT_rich Low_complexity Low_complexity 1 39 0 1540 203 42 25 chr10 39437651 39438010 -106151278 + MLT1A1 LTR MaLR 1 365 0 183 383 34 7 chr10 39439077 39439226 -106150062 + L2 LINE L2 1818 1970 -1344 226 250 26 0 chr10 39439240 39439316 -106149972 - L1ME3A LINE L1 -12 6158 6081 27 0 0 0 chr10 39439415 39439442 -106149846 + AT_rich Low_complexity Low_complexity 1 27 0 23 54 0 0 chr10 39439537 39439574 -106149714 + AT_rich Low_complexity Low_complexity 1 37 0 311 289 0 0 chr10 39440163 39440246 -106149042 + MIR SINE MIR 25 107 -155 1099 255 79 43 chr10 39440282 39440752 -106148536 - MLT1D LTR MaLR 0 505 19 1067 257 97 9 chr10 39441327 39441780 -106147508 + MLT1D LTR MaLR 1 390 0 215 298 157 16 chr10 39441851 39441972 -106147316 - L2 LINE L2 -219 3053 2916 314 324 48 59 chr10 39442227 39442499 -106146789 - L2 LINE L2 -828 2486 2218 22 56 0 0 chr10 39443532 39443568 -106145720 + AT_rich Low_complexity Low_complexity 1 36 0 2235 88 10 0 chr10 39444035 39444332 -106144956 + AluSq SINE Alu 1 300 -13 402 21 0 0 chr10 39444352 39444399 -106144889 + (TG)n Simple_repeat Simple_repeat 2 48 0 1304 188 36 10 chr10 39445264 39445568 -106143720 - L1MA6 LINE L1 -13 6287 5976 2323 100 0 3 chr10 39445985 39446296 -106142992 + AluSg SINE Alu 1 310 0 306 283 123 9 chr10 39448747 39448853 -106140435 + L2 LINE L2 3193 3310 -3 425 185 12 25 chr10 39449240 39449321 -106139967 - MER3 DNA MER1_type -129 80 1 2192 102 0 7 chr10 39449402 39449697 -106139591 + AluSq SINE Alu 1 293 -20 21 0 0 0 chr10 39449735 39449756 -106139532 + AT_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr10 39449812 39449852 -106139436 + AT_rich Low_complexity Low_complexity 1 40 0 2361 63 7 3 chr10 39449961 39450264 -106139024 - AluY SINE Alu -2 309 6 1046 83 8 0 chr10 39450269 39450401 -106138887 - AluY SINE Alu -178 133 1 2403 82 0 3 chr10 39450415 39450721 -106138567 - AluY SINE Alu -6 305 1 1098 229 23 29 chr10 39450755 39451061 -106138227 - L1MC3 LINE L1 -1493 6292 5989 707 201 34 117 chr10 39451076 39451123 -106138165 - L1MC3 LINE L1 -1965 5820 5771 297 0 0 0 chr10 39451123 39451156 -106138132 + (TG)n Simple_repeat Simple_repeat 1 33 0 707 201 34 117 chr10 39451156 39451298 -106137990 - L1MC3 LINE L1 -2014 5771 5662 1955 118 3 67 chr10 39451298 39451629 -106137659 + AluSx SINE Alu 1 310 -2 707 201 34 117 chr10 39451629 39451736 -106137552 - L1MC3 LINE L1 -2123 5662 5548 570 286 16 22 chr10 39451735 39451920 -106137368 - L1M4 LINE L1 -2039 4107 3924 * 801 76 0 0 chr10 39451926 39452031 -106137257 + AluY SINE Alu 198 302 -9 2950 240 72 38 chr10 39452052 39452264 -106137024 - L1M4 LINE L1 -2214 3932 3729 2203 84 30 10 chr10 39452264 39452563 -106136725 - AluY SINE Alu -6 305 1 2950 240 72 38 chr10 39452563 39452823 -106136465 - L1M4 LINE L1 -2417 3729 3479 2158 97 3 7 chr10 39452823 39453122 -106136166 - AluSc SINE Alu -11 298 1 2950 240 72 38 chr10 39453122 39453913 -106135375 - L1M4 LINE L1 -2667 3479 2625 338 147 15 0 chr10 39454040 39454108 -106135180 + GA-rich Low_complexity Low_complexity 4 72 0 2379 251 95 42 chr10 39454116 39454221 -106135067 + L1ME3A LINE L1 4795 4893 -1277 2434 80 3 0 chr10 39454221 39454523 -106134765 - AluY SINE Alu -8 303 1 2379 251 95 42 chr10 39454523 39455000 -106134288 + L1ME3A LINE L1 4893 5343 -827 2197 88 3 3 chr10 39455000 39455294 -106133994 - AluY SINE Alu -17 294 1 2379 251 95 42 chr10 39455294 39456015 -106133273 + L1ME3A LINE L1 5343 6164 -6 2111 113 0 23 chr10 39457457 39457766 -106131522 + AluSp SINE Alu 1 302 -11 2126 116 7 0 chr10 39457770 39458072 -106131216 + AluSg SINE Alu 1 304 -6 1800 134 3 27 chr10 39458195 39458511 -106130777 + AluSx SINE Alu 1 309 0 1920 148 0 10 chr10 39458639 39458937 -106130351 + AluSx SINE Alu 6 300 -12 1734 162 0 46 chr10 39459061 39459388 -106129900 + AluJb SINE Alu 1 312 0 205 208 113 0 chr10 39459634 39459687 -106129601 - MIR SINE MIR -93 169 111 2007 123 0 36 chr10 39461231 39461539 -106127749 - AluSx SINE Alu -15 297 1 2155 113 3 10 chr10 39461582 39461883 -106127405 - AluSx SINE Alu -13 299 1 2266 68 7 4 chr10 39462172 39462476 -106126812 + AluY SINE Alu 1 305 0 714 328 60 19 chr10 39462995 39463364 -106125924 - LTR16B LTR ERVL -78 386 3 387 73 0 0 chr10 39463591 39463646 -106125642 + (TG)n Simple_repeat Simple_repeat 1 55 0 195 42 0 0 chr10 39463645 39463669 -106125619 + (GA)n Simple_repeat Simple_repeat 1 24 0 * 455 359 58 26 chr10 39463836 39464215 -106125073 - HERVL LTR ERVL -643 4842 4452 232 189 38 19 chr10 39464216 39464269 -106125019 - MLT1F1 LTR MaLR -83 484 431 677 323 59 65 chr10 39464329 39464605 -106124683 - HERVL LTR ERVL -1053 3943 3667 2088 93 41 0 chr10 39464605 39464895 -106124393 - AluSx SINE Alu -10 302 1 677 323 59 65 chr10 39464895 39465216 -106124072 - HERVL LTR ERVL -1329 3667 3381 2435 59 3 13 chr10 39465216 39465522 -106123766 - AluY SINE Alu -8 303 1 677 323 59 65 chr10 39465522 39465769 -106123519 - HERVL LTR ERVL -1615 3381 3134 626 293 44 4 chr10 39465848 39466077 -106123211 - HERVL LTR ERVL -2371 3283 3046 1794 260 128 11 chr10 39466214 39467025 -106122263 + L1ME1 LINE L1 5241 6158 -8 2385 85 0 0 chr10 39467688 39467995 -106121293 + AluY SINE Alu 1 307 -4 4419 134 15 126 chr10 39468156 39469703 -106119585 - pTR5 LTR ERV1 0 2606 1524 194 257 14 81 chr10 39469756 39469830 -106119458 - MIR SINE MIR -75 187 119 2381 71 0 3 chr10 39469846 39470143 -106119145 - AluY SINE Alu -15 296 1 2387 58 0 35 chr10 39471699 39472010 -106117278 + AluY SINE Alu 1 300 -11 356 67 0 0 chr10 39472066 39472111 -106117177 - Tigger3(Golem) DNA MER2_type -58 2971 2927 1854 158 10 0 chr10 39472327 39472618 -106116670 + AluSx SINE Alu 1 294 -18 648 138 0 0 chr10 39472657 39472751 -106116537 - AluS SINE Alu -218 95 2 254 105 0 0 chr10 39472803 39472841 -106116447 + AluSp SINE Alu 130 167 -136 1666 110 8 4 chr10 39472841 39473078 -106116210 + AluSq SINE Alu 76 313 0 512 276 69 23 chr10 39473157 39473331 -106115957 + MIR SINE MIR 3 184 -78 5940 145 76 45 chr10 39473412 39473730 -106115558 - Tigger3b DNA MER2_type -1797 1231 925 215 61 30 0 chr10 39473730 39473763 -106115525 + (TGAG)n Simple_repeat Simple_repeat 1 34 0 5940 145 76 45 chr10 39473763 39474317 -106114971 - Tigger3b DNA MER2_type -2103 925 308 1989 104 0 4 chr10 39474317 39474576 -106114712 + AluSq SINE Alu 1 258 -55 5940 145 76 45 chr10 39474576 39474894 -106114394 - Tigger3b DNA MER2_type -2720 308 2 269 368 19 32 chr10 39474909 39475064 -106114224 + L2 LINE L2 2371 2523 -791 186 207 0 52 chr10 39475214 39475272 -106114016 + L2 LINE L2 2685 2739 -575 22 0 0 0 chr10 39475518 39475540 -106113748 + AT_rich Low_complexity Low_complexity 1 22 0 2462 68 3 3 chr10 39475853 39476163 -106113125 + AluY SINE Alu 1 310 -1 21 57 0 0 chr10 39476180 39476215 -106113073 + AT_rich Low_complexity Low_complexity 1 35 0 2039 127 0 0 chr10 39476785 39477060 -106112228 + AluSg SINE Alu 1 275 -35 316 361 53 24 chr10 39477082 39477290 -106111998 + L1M2 LINE L1 2229 2442 -4407 955 172 25 129 chr10 39477482 39477808 -106111480 + L1MB4 LINE L1 4213 4504 -1642 211 269 11 32 chr10 39477821 39477914 -106111374 + A-rich Low_complexity Low_complexity 2 92 0 769 75 0 0 chr10 39478144 39478238 -106111050 + AluSc SINE Alu 41 134 -175 2218 111 3 3 chr10 39478238 39478544 -106110744 + AluSg SINE Alu 1 306 -4 1228 183 0 31 chr10 39478566 39478795 -106110493 - AluJo SINE Alu -20 292 71 396 321 52 21 chr10 39478803 39478996 -106110292 + MIR SINE MIR 28 226 -36 903 188 12 12 chr10 39480579 39480739 -106108549 - FRAM SINE Alu -15 161 2 1583 181 43 0 chr10 39480760 39481036 -106108252 - AluJb SINE Alu -24 288 1 21 0 0 0 chr10 39481041 39481062 -106108226 + AT_rich Low_complexity Low_complexity 1 21 0 1921 107 71 7 chr10 39481138 39481418 -106107870 - AluSg SINE Alu -12 298 1 1884 157 3 13 chr10 39482628 39482941 -106106347 - AluJb SINE Alu -2 310 1 186 207 0 52 chr10 39483342 39483400 -106105888 + L2 LINE L2 2685 2739 -575 22 0 0 0 chr10 39483646 39483668 -106105620 + AT_rich Low_complexity Low_complexity 1 22 0 2462 68 3 3 chr10 39483981 39484291 -106104997 + AluY SINE Alu 1 310 -1 21 57 0 0 chr10 39484308 39484343 -106104945 + AT_rich Low_complexity Low_complexity 1 35 0 2314 119 0 0 chr10 39484913 39485353 -106103935 + AluSg SINE Alu 1 440 0 1785 159 7 7 chr10 39485713 39486014 -106103274 - AluSx SINE Alu -11 301 1 562 213 44 38 chr10 39487356 39487539 -106101749 - LTR37B LTR ERV1 -29 439 256 4073 185 29 53 chr10 39487541 39487935 -106101353 + L1MB4 LINE L1 4905 5307 -873 2073 129 3 0 chr10 39487935 39488229 -106101059 + AluSq SINE Alu 1 295 -18 4073 185 29 53 chr10 39488229 39488986 -106100302 + L1MB4 LINE L1 5307 6025 -155 2049 149 0 0 chr10 39488986 39489282 -106100006 - AluSc SINE Alu -10 299 4 4073 185 29 53 chr10 39489282 39489397 -106099891 + L1MB4 LINE L1 6025 6141 -39 2054 127 7 16 chr10 39489439 39489747 -106099541 - AluSp SINE Alu -8 305 1 1478 227 110 46 chr10 39490125 39490633 -106098655 - L1MA7 LINE L1 -9 6282 5744 374 248 50 14 chr10 39490633 39490774 -106098514 + L1M LINE L1 5259 5404 -955 4382 167 92 31 chr10 39490774 39492223 -106097065 + pTR5 LTR ERV1 741 2438 0 621 214 200 99 chr10 39492247 39492793 -106096495 + L1MCa LINE L1 1711 2311 -4115 2052 148 0 0 chr10 39492802 39493105 -106096183 + AluSx SINE Alu 1 303 -9 647 215 71 92 chr10 39493288 39493614 -106095674 - MER114 LTR ERV -284 364 46 2171 102 0 3 chr10 39493817 39494134 -106095154 - AluY SINE Alu 0 316 1 27 62 0 0 chr10 39494288 39494336 -106094952 + AT_rich Low_complexity Low_complexity 1 48 0 2157 92 0 36 chr10 39494592 39494898 -106094390 + AluY SINE Alu 2 296 -15 2196 117 0 3 chr10 39495152 39495451 -106093837 - AluSx SINE Alu -14 298 1 1511 157 52 28 chr10 39495824 39496111 -106093177 + AluJb SINE Alu 4 297 -15 569 236 0 39 chr10 39496717 39496844 -106092444 - FLAM_A SINE Alu -15 127 6 210 71 0 0 chr10 39496860 39496888 -106092400 + (CATTT)n Simple_repeat Simple_repeat 3 30 0 1224 223 37 7 chr10 39496888 39497157 -106092131 - AluJb SINE Alu -29 283 7 237 65 0 0 chr10 39497448 39497479 -106091809 + (GGAGA)n Simple_repeat Simple_repeat 5 35 0 1843 121 66 0 chr10 39497493 39497750 -106091538 + AluSq SINE Alu 9 282 -31 466 141 26 0 chr10 39497750 39497906 -106091382 + GA-rich Low_complexity Low_complexity 1 160 0 5118 192 75 35 chr10 39497914 39498341 -106090947 + L1MC3 LINE L1 6305 6714 -1071 2257 105 7 0 chr10 39498341 39498636 -106090652 - AluSq SINE Alu -16 297 1 5118 192 75 35 chr10 39498636 39499622 -106089666 + L1MC3 LINE L1 6714 7774 -11 659 234 89 101 chr10 39499670 39499837 -106089451 - LTR24B LTR ERV1 -4 572 405 2408 60 0 16 chr10 39499837 39500151 -106089137 - AluY SINE Alu -2 309 1 659 234 89 101 chr10 39500151 39500411 -106088877 - LTR24B LTR ERV1 -171 405 150 2063 128 7 3 chr10 39500546 39500843 -106088445 + AluSg SINE Alu 1 298 -12 200 336 78 35 chr10 39501026 39501142 -106088146 - MIR SINE MIR -68 140 20 1570 180 3 21 chr10 39501373 39501712 -106087576 - L1MA5 LINE L1 0 6300 5968 2388 87 0 0 chr10 39501717 39502017 -106087271 - AluSq SINE Alu -13 300 1 22 56 0 0 chr10 39502479 39502515 -106086773 + AT_rich Low_complexity Low_complexity 1 36 0 372 209 52 67 chr10 39503298 39503432 -106085856 + Charlie1 DNA MER1_type 1671 1802 -959 214 319 43 35 chr10 39503703 39503819 -106085469 - L2 LINE L2 -479 2835 2719 28 0 0 0 chr10 39503826 39503854 -106085434 + AT_rich Low_complexity Low_complexity 1 28 0 2229 101 0 10 chr10 39504282 39504589 -106084699 + AluSq SINE Alu 1 304 -9 189 0 0 0 chr10 39504892 39504913 -106084375 + (A)n Simple_repeat Simple_repeat 1 21 0 24 32 0 0 chr10 39505351 39505382 -106083906 + AT_rich Low_complexity Low_complexity 1 31 0 2231 101 3 0 chr10 39505798 39506096 -106083192 + AluSp SINE Alu 1 299 -14 22 0 0 0 chr10 39506096 39506118 -106083170 + AT_rich Low_complexity Low_complexity 1 22 0 2436 57 3 13 chr10 39506161 39506475 -106082813 + AluY SINE Alu 1 311 0 1042 83 8 0 chr10 39506479 39506611 -106082677 + AluY SINE Alu 1 133 -178 2314 73 7 3 chr10 39506616 39506919 -106082369 + AluY SINE Alu 6 309 -2 26 50 0 0 chr10 39507028 39507068 -106082220 + AT_rich Low_complexity Low_complexity 1 40 0 21 0 0 0 chr10 39507124 39507145 -106082143 + AT_rich Low_complexity Low_complexity 1 21 0 2186 102 0 7 chr10 39507183 39507478 -106081810 - AluSq SINE Alu -20 293 1 389 185 12 25 chr10 39507559 39507640 -106081648 + MER3 DNA MER1_type 1 80 -129 309 283 123 9 chr10 39508027 39508133 -106081155 - L2 LINE L2 -3 3310 3193 2352 100 0 3 chr10 39510584 39510895 -106078393 - AluSg SINE Alu 0 310 1 1887 157 3 13 chr10 39511415 39511728 -106077560 + AluJb SINE Alu 1 310 -2 1923 107 71 7 chr10 39512938 39513218 -106076070 + AluSg SINE Alu 1 298 -12 21 0 0 0 chr10 39513294 39513315 -106075973 + AT_rich Low_complexity Low_complexity 1 21 0 1596 181 43 0 chr10 39513320 39513596 -106075692 + AluJb SINE Alu 1 288 -24 927 182 13 13 chr10 39513617 39513776 -106075512 + FRAM SINE Alu 2 160 -16 427 321 52 21 chr10 39515359 39515552 -106073736 - MIR SINE MIR -36 226 28 1259 183 0 31 chr10 39515560 39515789 -106073499 + AluJo SINE Alu 71 292 -20 1861 164 3 3 chr10 39515813 39516123 -106073165 - AluSg SINE Alu 0 310 1 724 75 0 0 chr10 39516123 39516217 -106073071 - AluSc SINE Alu -175 134 41 211 269 11 32 chr10 39516447 39516540 -106072748 + T-rich Low_complexity Low_complexity 2 92 0 863 164 24 128 chr10 39516553 39516882 -106072406 - L1 LINE L1 -1642 4504 4210 2071 98 7 0 chr10 39517300 39517575 -106071713 - AluSx SINE Alu -35 277 1 684 252 64 58 chr10 39517599 39518131 -106071157 - L1MEd LINE L1 -4923 1196 662 2230 95 0 19 chr10 39518254 39518571 -106070717 + AluY SINE Alu 1 311 0 23 0 0 0 chr10 39518667 39518690 -106070598 + AT_rich Low_complexity Low_complexity 1 23 0 288 312 39 39 chr10 39518787 39519194 -106070094 - L1MEc LINE L1 -4980 1416 1010 2409 60 27 0 chr10 39519572 39519870 -106069418 - AluY SINE Alu -5 306 1 256 311 8 25 chr10 39520067 39520186 -106069102 + CT-rich Low_complexity Low_complexity 2 118 0 515 342 58 19 chr10 39520398 39520711 -106068577 + L2 LINE L2 2522 2846 -468 307 318 156 65 chr10 39520747 39521055 -106068233 + L2 LINE L2 2935 3270 -2 236 323 100 31 chr10 39521703 39521833 -106067455 - L3 LINE CR1 -19 1558 1420 190 314 20 39 chr10 39521879 39521981 -106067307 - L3 LINE CR1 -278 1299 1200 372 133 0 0 chr10 39522835 39522895 -106066393 + (TTCC)n Simple_repeat Simple_repeat 3 62 0 219 277 69 54 chr10 39523066 39523196 -106066092 + L3 LINE CR1 1171 1302 -275 354 268 55 0 chr10 39523303 39523430 -106065858 + MER117 DNA MER1_type 30 163 -34 31 26 0 0 chr10 39524199 39524237 -106065051 + AT_rich Low_complexity Low_complexity 1 38 0 2387 67 0 10 chr10 39524351 39524650 -106064638 - AluY SINE Alu -15 296 1 839 158 0 0 chr10 39524977 39525110 -106064178 - AluSg/x SINE Alu -4 308 176 2105 103 7 42 chr10 39525209 39525519 -106063769 + AluSx SINE Alu 1 299 -13 369 355 130 5 chr10 39525755 39525955 -106063333 - MIR SINE MIR -37 225 1 2312 109 0 10 chr10 39526017 39526329 -106062959 - AluSc SINE Alu 0 309 1 403 229 46 23 chr10 39526890 39527021 -106062267 + LTR33A LTR ERVL 367 500 -23 1873 81 85 0 chr10 39527023 39527310 -106061978 - AluY SINE Alu 0 309 1 2360 65 0 23 chr10 39528018 39528325 -106060963 + AluY SINE Alu 1 300 -11 1986 140 0 7 chr10 39528624 39528909 -106060379 + AluSx SINE Alu 5 287 -25 28 48 0 0 chr10 39528909 39528951 -106060337 + AT_rich Low_complexity Low_complexity 1 42 0 559 69 0 0 chr10 39529411 39529483 -106059805 - AluY SINE Alu -111 200 129 2363 67 7 13 chr10 39529956 39530256 -106059032 - AluY SINE Alu -13 298 1 1789 177 7 0 chr10 39530512 39530857 -106058431 - AluJb SINE Alu 0 312 1 1930 105 58 10 chr10 39530859 39531154 -106058134 - AluSx SINE Alu -3 309 1 21 0 0 0 chr10 39531509 39531530 -106057758 + AT_rich Low_complexity Low_complexity 1 21 0 2062 103 21 10 chr10 39531653 39531944 -106057344 - AluSc SINE Alu -15 294 1 22 56 0 0 chr10 39532170 39532206 -106057082 + AT_rich Low_complexity Low_complexity 1 36 0 1500 113 5 23 chr10 39532207 39532342 -106056946 + AluSc SINE Alu 1 132 -177 2091 139 3 0 chr10 39532342 39532645 -106056643 + AluSx SINE Alu 1 304 -8 1500 113 5 23 chr10 39532645 39532730 -106056558 + AluSc SINE Alu 132 217 -92 257 49 0 0 chr10 39532730 39532771 -106056517 + AluY SINE Alu 260 300 -1 26 30 0 0 chr10 39532825 39532858 -106056430 + AT_rich Low_complexity Low_complexity 1 33 0 2339 94 3 3 chr10 39533794 39534102 -106055186 + AluSp SINE Alu 1 308 -5 2334 83 0 10 chr10 39534102 39534404 -106054884 + AluSq SINE Alu 1 299 -14 1428 171 24 99 chr10 39534436 39534676 -106054612 + L1MA3 LINE L1 5908 6106 -199 2108 116 18 0 chr10 39534676 39534961 -106054327 - AluSx SINE Alu -22 290 1 1428 171 24 99 chr10 39534961 39535136 -106054152 + L1MA3 LINE L1 6106 6292 -13 34 0 0 0 chr10 39535138 39535172 -106054116 + AT_rich Low_complexity Low_complexity 1 34 0 2864 160 16 57 chr10 39535172 39535298 -106053990 + LTR49-int LTR ERV1 3971 4101 -2602 2203 127 10 0 chr10 39535298 39535605 -106053683 + AluSx SINE Alu 1 310 -2 2864 160 16 57 chr10 39535605 39536125 -106053163 + LTR49-int LTR ERV1 4101 4641 -2062 2283 97 27 0 chr10 39536125 39536423 -106052865 - AluSp SINE Alu -7 306 1 2864 160 16 57 chr10 39536423 39536697 -106052591 + LTR49-int LTR ERV1 4641 6070 -633 230 266 138 11 chr10 39536946 39537040 -106052248 + LTR47A LTR ERVL 261 366 -86 217 286 154 0 chr10 39537333 39537424 -106051864 - L2 LINE L2 -1002 2312 2208 434 290 59 35 chr10 39537564 39537733 -106051555 - MIR SINE MIR -1 261 89 2151 104 0 11 chr10 39539229 39539549 -106049739 - AluSx SINE Alu 0 317 1 3536 216 37 24 chr10 39540165 39540344 -106048944 - L1MC3 LINE L1 -848 6937 6762 1300 213 114 21 chr10 39540344 39540678 -106048610 - MLT1A1 LTR MaLR 0 365 1 3536 216 37 24 chr10 39540678 39541408 -106047880 - L1MC3 LINE L1 -1023 6762 6016 250 278 106 40 chr10 39541768 39541919 -106047369 + L2 LINE L2 3136 3296 -17 255 157 0 0 chr10 39541936 39541987 -106047301 + (TGAA)n Simple_repeat Simple_repeat 2 52 0 2111 132 0 0 chr10 39542229 39542518 -106046770 + AluSg SINE Alu 1 289 -21 2183 110 7 0 chr10 39543423 39543732 -106045556 - AluY SINE Alu 0 311 1 181 284 116 21 chr10 39545119 39545214 -106044074 + MIR SINE MIR 83 186 -76 433 115 0 0 chr10 39546624 39546685 -106042603 + AluS SINE Alu 1 61 -248 322 96 0 137 chr10 39546873 39546946 -106042342 - L1PA10 LINE L1 0 6168 6106 338 307 57 21 chr10 39546973 39547113 -106042175 + HAL1 LINE L1 757 901 -1606 319 273 96 60 chr10 39547404 39547938 -106041350 + HAL1 LINE L1 1211 1763 -744 32 0 0 0 chr10 39548638 39548670 -106040618 + AT_rich Low_complexity Low_complexity 1 32 0 1645 189 3 0 chr10 39548670 39548955 -106040333 - AluSq SINE Alu -26 287 2 2281 98 0 43 chr10 39549279 39549604 -106039684 - AluSq SINE Alu -2 311 1 2043 118 3 0 chr10 39549638 39549926 -106039362 - AluSx SINE Alu -1 311 23 2182 92 13 19 chr10 39550148 39550463 -106038825 + AluSp SINE Alu 1 313 0 22 35 0 0 chr10 39551512 39551541 -106037747 + AT_rich Low_complexity Low_complexity 1 29 0 198 323 8 60 chr10 39551924 39552057 -106037231 + L2 LINE L2 2599 2724 -590 561 310 163 33 chr10 39552167 39552657 -106036631 + L2 LINE L2 1838 2391 -923 1628 159 106 22 chr10 39552850 39553208 -106036080 - MER67A LTR ERV1 0 543 156 1952 233 45 48 chr10 39553529 39554198 -106035090 - MER31-int LTR ERV1 -3973 963 297 1912 119 0 7 chr10 39554198 39554511 -106034777 + AluSx SINE Alu 1 311 0 256 242 0 0 chr10 39554626 39554688 -106034600 - MER112 DNA MER1_type -188 72 11 215 377 26 45 chr10 39554926 39555080 -106034208 + L2 LINE L2 3095 3245 -27 2141 115 0 13 chr10 39555532 39555837 -106033451 + AluSx SINE Alu 1 301 -11 378 0 0 0 chr10 39556005 39556047 -106033241 + (TG)n Simple_repeat Simple_repeat 2 43 0 1466 106 20 0 chr10 39556049 39556248 -106033040 - AluSg/x SINE Alu -31 279 77 2474 63 0 7 chr10 39556248 39556549 -106032739 - AluY SINE Alu -12 299 1 21 57 0 0 chr10 39556701 39556736 -106032552 + AT_rich Low_complexity Low_complexity 1 35 0 2128 98 0 33 chr10 39556747 39557053 -106032235 + AluSc SINE Alu 1 296 -13 2436 81 0 3 chr10 39557506 39557816 -106031472 + AluY SINE Alu 3 311 0 857 219 0 12 chr10 39558185 39558345 -106030943 - FRAM SINE Alu -7 159 2 376 282 112 12 chr10 39559668 39559838 -106029450 - MIR SINE MIR -55 207 21 2420 64 0 13 chr10 39560626 39560937 -106028351 + AluY SINE Alu 1 307 -4 1228 163 6 137 chr10 39561685 39562022 -106027266 - AluJb SINE Alu -10 302 10 243 0 0 0 chr10 39562192 39562219 -106027069 + (CA)n Simple_repeat Simple_repeat 2 28 0 660 150 60 51 chr10 39562454 39562653 -106026635 + MER6 DNA MER2_type -65 865 0 29 70 0 0 chr10 39562797 39562854 -106026434 + AT_rich Low_complexity Low_complexity 1 57 0 4730 146 75 27 chr10 39562939 39564030 -106025258 + pTR5 LTR ERV1 57 275 -439 268 276 10 0 chr10 39564031 39564129 -106025159 + LTR30 LTR ERV1 544 642 -80 1352 136 0 5 chr10 39564132 39564353 -106024935 + pTR5 LTR ERV1 172 391 -2047 270 284 67 45 chr10 39564774 39564908 -106024380 - L2 LINE L2 -534 2780 2644 301 276 9 57 chr10 39565107 39565212 -106024076 - L2 LINE L2 -994 2320 2221 505 131 0 24 chr10 39565316 39565400 -106023888 - AluJb SINE Alu -19 293 212 733 169 8 0 chr10 39565430 39565548 -106023740 - FLAM_C SINE Alu -12 121 3 212 290 103 56 chr10 39567736 39567843 -106021445 + L2 LINE L2 3190 3301 -12 209 233 0 0 chr10 39567851 39567894 -106021394 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 2821 13 0 0 chr10 39568105 39568416 -106020872 - AluY SINE Alu 0 311 1 1683 158 30 33 chr10 39568893 39569196 -106020092 + AluJb SINE Alu 1 302 -10 2036 141 10 0 chr10 39569198 39569497 -106019791 + AluSq SINE Alu 1 302 -11 216 0 0 0 chr10 39569498 39569522 -106019766 + (CA)n Simple_repeat Simple_repeat 1 24 0 21 57 0 0 chr10 39569710 39569745 -106019543 + AT_rich Low_complexity Low_complexity 1 35 0 1757 187 0 0 chr10 39569817 39570116 -106019172 + AluJo SINE Alu 1 299 -13 1066 147 0 0 chr10 39570190 39570372 -106018916 + AluSg/x SINE Alu 128 309 0 221 214 34 146 chr10 39570608 39570697 -106018591 - L2 LINE L2 -1 3312 3234 698 65 11 0 chr10 39571255 39571378 -106017910 - AluSg/x SINE Alu 0 316 193 2102 104 7 4 chr10 39571979 39572304 -106016984 + AluSc SINE Alu 1 326 0 1825 124 4 0 chr10 39572523 39572782 -106016506 - AluSx SINE Alu -15 297 38 21 36 0 0 chr10 39573522 39573550 -106015738 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr10 39574171 39574197 -106015091 + AT_rich Low_complexity Low_complexity 1 26 0 394 319 69 84 chr10 39574201 39574521 -106014767 + L1MEd LINE L1 81 395 -5724 2028 128 7 0 chr10 39574782 39575080 -106014208 + AluSx SINE Alu 1 300 -12 223 224 0 66 chr10 39575246 39575322 -106013966 + A-rich Low_complexity Low_complexity 5 75 0 29 28 0 0 chr10 39575324 39575360 -106013928 + AT_rich Low_complexity Low_complexity 1 36 0 2515 58 7 0 chr10 39575367 39575676 -106013612 + AluY SINE Alu 1 311 0 430 228 18 23 chr10 39577121 39577241 -106012047 - MLT1J2 LTR MaLR -258 151 37 745 257 6 6 chr10 39577353 39577536 -106011752 - MER58A DNA MER1_type 0 224 42 1950 127 11 0 chr10 39577536 39577819 -106011469 + AluSx SINE Alu 1 286 -26 2365 81 3 0 chr10 39577828 39578125 -106011163 + AluY SINE Alu 1 298 -13 22 80 0 0 chr10 39578872 39578922 -106010366 + AT_rich Low_complexity Low_complexity 1 50 0 2259 118 0 0 chr10 39579119 39579416 -106009872 + AluSg SINE Alu 1 297 -13 2254 85 3 23 chr10 39579538 39579843 -106009445 + AluY SINE Alu 1 299 -12 3294 138 197 11 chr10 39580671 39581368 -106007920 + LTR1B LTR ERV1 1 826 0 23 0 0 0 chr10 39582189 39582212 -106007076 + AT_rich Low_complexity Low_complexity 1 23 0 520 241 38 19 chr10 39582444 39582602 -106006686 + MER45A DNA AcHobo 1 161 -17 2233 232 84 9 chr10 39583803 39584483 -106004805 - L1PB4 LINE L1 -845 5301 4571 * 2398 158 13 4 chr10 39584479 39584947 -106004341 + L1PB4 LINE L1 5314 5785 -371 251 235 34 17 chr10 39584949 39585068 -106004220 + (TA)n Simple_repeat Simple_repeat 1 121 0 556 106 0 32 chr10 39585068 39585162 -106004126 + L1PB4 LINE L1 5775 5865 -291 606 90 0 0 chr10 39585163 39585252 -106004036 - AluSc SINE Alu -6 303 215 612 198 0 8 chr10 39585252 39585378 -106003910 + L1PB4 LINE L1 6027 6151 -5 2089 98 7 26 chr10 39585571 39585877 -106003411 + AluSx SINE Alu 3 302 -10 2026 134 0 3 chr10 39585897 39586205 -106003083 + AluSq SINE Alu 1 307 0 2395 78 0 3 chr10 39586264 39586571 -106002717 + AluY SINE Alu 1 306 -5 399 284 151 32 chr10 39586596 39586933 -106002355 + L1MCa LINE L1 1203 1978 -4448 556 164 8 16 chr10 39587937 39588059 -106001229 - L1MA6 LINE L1 -474 5826 5706 2149 149 32 21 chr10 39588062 39588499 -106000789 + L1MA6 LINE L1 5856 6297 -3 2348 78 0 3 chr10 39588509 39588805 -106000483 + AluY SINE Alu 1 295 -16 1455 94 10 5 chr10 39588922 39589123 -106000165 + AluSp SINE Alu 107 308 -5 2026 149 10 0 chr10 39589123 39589432 -105999856 + AluSx SINE Alu 1 312 0 2276 156 27 20 chr10 39589432 39589928 -105999360 + LTR49-int LTR ERV1 5262 5816 -633 322 141 28 0 chr10 39589952 39590023 -105999265 - AluSp/q SINE Alu 0 303 231 212 290 103 56 chr10 39590863 39590970 -105998318 + L2 LINE L2 3190 3301 -12 209 233 0 0 chr10 39590978 39591021 -105998267 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 2792 16 0 0 chr10 39591232 39591543 -105997745 - AluY SINE Alu 0 311 1 1683 158 30 33 chr10 39592020 39592323 -105996965 + AluJb SINE Alu 1 302 -10 1960 151 10 0 chr10 39592325 39592624 -105996664 + AluSq SINE Alu 1 302 -11 216 0 0 0 chr10 39592625 39592649 -105996639 + (CA)n Simple_repeat Simple_repeat 1 24 0 21 57 0 0 chr10 39592837 39592872 -105996416 + AT_rich Low_complexity Low_complexity 1 35 0 1735 191 0 0 chr10 39592944 39593243 -105996045 + AluJo SINE Alu 1 299 -13 1134 141 0 0 chr10 39593317 39593480 -105995808 + AluSg/x SINE Alu 128 290 -20 207 225 34 146 chr10 39593734 39593823 -105995465 - L2 LINE L2 -1 3312 3234 698 65 11 0 chr10 39594381 39594504 -105994784 - AluSg/x SINE Alu 0 314 191 2102 104 7 4 chr10 39595105 39595430 -105993858 + AluSc SINE Alu 1 326 0 1798 127 4 0 chr10 39595649 39595908 -105993380 - AluSx SINE Alu -15 297 38 21 36 0 0 chr10 39596648 39596676 -105992612 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr10 39597297 39597323 -105991965 + AT_rich Low_complexity Low_complexity 1 26 0 394 319 69 84 chr10 39597327 39597647 -105991641 + L1MEd LINE L1 167 481 -5724 2028 128 7 0 chr10 39597908 39598206 -105991082 + AluSx SINE Alu 1 300 -12 209 233 15 68 chr10 39598372 39598493 -105990795 + A-rich Low_complexity Low_complexity 5 120 -10 1594 111 77 0 chr10 39598493 39598727 -105990561 + AluSc SINE Alu 1 252 -57 209 233 15 68 chr10 39598727 39598738 -105990550 + A-rich Low_complexity Low_complexity 120 130 0 415 342 119 28 chr10 39598752 39599070 -105990218 + L1MEd LINE L1 1108 1336 -4881 2433 77 0 3 chr10 39599070 39599369 -105989919 + AluY SINE Alu 1 298 -13 415 342 119 28 chr10 39599369 39599569 -105989719 + L1MEd LINE L1 1336 1516 -4701 1594 108 97 41 chr10 39599992 39600290 -105988998 + AluSx SINE Alu 1 313 0 2355 71 0 0 chr10 39600489 39600808 -105988480 + AluSg SINE Alu 1 319 0 2015 134 7 3 chr10 39601056 39601346 -105987942 - AluSc SINE Alu -18 291 1 2036 109 51 10 chr10 39601486 39601780 -105987508 + AluSx SINE Alu 1 306 -6 470 300 29 19 chr10 39601782 39601992 -105987296 + L1MEd LINE L1 2703 2914 -3301 26 30 0 0 chr10 39602023 39602056 -105987232 + AT_rich Low_complexity Low_complexity 1 33 0 24 0 0 0 chr10 39602105 39602129 -105987159 + AT_rich Low_complexity Low_complexity 1 24 0 1664 50 0 5 chr10 39602318 39602517 -105986771 + AluY SINE Alu 1 198 -113 26 0 0 0 chr10 39602538 39602564 -105986724 + AT_rich Low_complexity Low_complexity 1 26 0 311 327 13 40 chr10 39602783 39602933 -105986355 - MLT1H LTR MaLR -195 354 209 289 304 16 8 chr10 39603122 39603247 -105986041 + L1MEd LINE L1 3469 3594 -2621 200 233 0 0 chr10 39603862 39603905 -105985383 + A-rich Low_complexity Low_complexity 1 43 0 201 74 0 0 chr10 39604009 39604036 -105985252 + (GA)n Simple_repeat Simple_repeat 2 28 0 2185 113 3 7 chr10 39605844 39606144 -105983144 + AluSg SINE Alu 1 299 -11 656 167 0 25 chr10 39606144 39606255 -105983033 - AluJb SINE Alu -19 293 184 379 212 106 8 chr10 39606388 39606520 -105982768 - MIR SINE MIR 0 262 118 24 32 0 0 chr10 39607730 39607761 -105981527 + AT_rich Low_complexity Low_complexity 1 31 0 2458 74 0 0 chr10 39608425 39608724 -105980564 + AluY SINE Alu 1 299 -12 218 250 231 0 chr10 39609137 39609241 -105980047 + MIR SINE MIR 14 141 -121 2445 74 0 0 chr10 39609858 39610157 -105979131 - AluY SINE Alu -12 299 1 2003 148 0 0 chr10 39610481 39610785 -105978503 + AluSx SINE Alu 1 304 -8 1267 175 58 5 chr10 39611239 39611552 -105977736 - MER33 DNA MER1_type -10 314 1 2301 84 3 0 chr10 39611585 39611882 -105977406 - AluSx SINE Alu -14 298 1 417 39 0 0 chr10 39613125 39613176 -105976112 + (TA)n Simple_repeat Simple_repeat 1 51 0 6628 79 23 0 chr10 39613180 39613571 -105975717 - L1PA8 LINE L1 -5 6167 5787 2475 78 3 0 chr10 39613571 39613879 -105975409 - AluY SINE Alu -2 309 1 6628 79 23 0 chr10 39613879 39614479 -105974809 - L1PA8 LINE L1 -385 5787 5184 1522 96 8 16 chr10 39614479 39614563 -105974725 + L1P LINE L1 4939 5022 -1124 2234 93 33 7 chr10 39614563 39614864 -105974424 + AluSg SINE Alu 1 309 -1 1522 96 8 16 chr10 39614864 39615030 -105974258 + L1P LINE L1 5022 5187 -959 201 349 116 23 chr10 39615048 39615177 -105974111 - MIR3 SINE MIR -10 198 58 497 329 65 22 chr10 39615218 39615558 -105973730 + L2 LINE L2 2748 3101 -212 283 230 31 126 chr10 39615573 39615899 -105973389 - L1M4 LINE L1 -1258 4888 4594 * 311 261 45 9 chr10 39615898 39616009 -105973279 - L1M4 LINE L1 -2492 3654 3540 850 216 39 86 chr10 39616010 39616412 -105972876 + MLT1A2 LTR MaLR 1 457 0 459 276 88 29 chr10 39616527 39617053 -105972235 - L1M4 LINE L1 -2694 3452 2896 369 0 0 0 chr10 39617058 39617099 -105972189 + (TTTC)n Simple_repeat Simple_repeat 2 42 0 2048 150 7 0 chr10 39617102 39617408 -105971880 - AluSc SINE Alu -1 308 1 244 155 0 35 chr10 39617408 39617466 -105971822 - L1M4 LINE L1 -3237 2909 2854 1682 173 0 4 chr10 39617536 39617814 -105971474 + AluJb SINE Alu 11 287 -25 27068 46 4 3 chr10 39617971 39622303 -105966985 + L1PA4 LINE L1 1822 6151 -4 260 300 73 38 chr10 39623074 39623228 -105966060 + MIR3 SINE MIR 13 174 -63 1852 181 32 3 chr10 39623595 39623933 -105965355 - MER7A DNA MER2_type 0 346 1 2417 73 0 0 chr10 39624385 39624685 -105964603 + AluY SINE Alu 1 300 -11 1143 245 72 92 chr10 39624744 39625756 -105963532 + L1MC4 LINE L1 7060 7995 0 258 327 82 31 chr10 39626963 39627039 -105962249 - L2 LINE L2 -11 3302 3231 2735 132 5 30 chr10 39627039 39627478 -105961810 + MSTA LTR MaLR 1 428 0 258 327 82 31 chr10 39627478 39627560 -105961728 - L2 LINE L2 -82 3231 3136 1437 167 155 20 chr10 39627875 39628217 -105961071 + MLT1B LTR MaLR 1 388 -2 25 0 0 0 chr10 39628477 39628502 -105960786 + AT_rich Low_complexity Low_complexity 1 25 0 212 276 0 23 chr10 39629023 39629110 -105960178 + (TA)n Simple_repeat Simple_repeat 1 85 0 29 28 0 0 chr10 39629257 39629293 -105959995 + AT_rich Low_complexity Low_complexity 1 36 0 411 187 0 0 chr10 39629361 39629468 -105959820 + (CA)n Simple_repeat Simple_repeat 1 107 0 40749 48 6 1 chr10 39630691 39636810 -105952478 + L1PA4 LINE L1 2 6154 -1 24 77 0 0 chr10 39637317 39637369 -105951919 + AT_rich Low_complexity Low_complexity 1 52 0 251 154 15 0 chr10 39637581 39637646 -105951642 + (TA)n Simple_repeat Simple_repeat 1 66 0 183 129 0 0 chr10 39638436 39638467 -105950821 + (TA)n Simple_repeat Simple_repeat 1 31 0 297 51 0 0 chr10 39638531 39638570 -105950718 + (TCTA)n Simple_repeat Simple_repeat 3 41 0 332 289 15 0 chr10 39638571 39638706 -105950582 + (TA)n Simple_repeat Simple_repeat 2 138 0 1899 112 0 8 chr10 39639313 39639573 -105949715 + AluSx SINE Alu 41 298 -14 206 213 27 13 chr10 39640178 39640253 -105949035 + (TAAA)n Simple_repeat Simple_repeat 3 78 0 346 287 16 0 chr10 39640323 39640505 -105948783 + (TA)n Simple_repeat Simple_repeat 1 184 0 217 241 12 24 chr10 39640475 39640558 -105948730 + (CA)n Simple_repeat Simple_repeat 2 83 0 * 189 74 0 0 chr10 39641160 39641187 -105948101 + (CA)n Simple_repeat Simple_repeat 2 28 0 2165 191 63 35 chr10 39641190 39641765 -105947523 + LTR49 LTR ERV1 5 595 0 293 242 10 10 chr10 39641765 39641926 -105947362 + (TA)n Simple_repeat Simple_repeat 1 161 0 2279 104 0 16 chr10 39641992 39642309 -105946979 - AluSx SINE Alu 0 312 1 258 206 29 0 chr10 39644268 39644336 -105944952 - LTR24C LTR ERV1 -10 625 556 234 310 0 10 chr10 39644707 39644807 -105944481 + (TA)n Simple_repeat Simple_repeat 2 100 0 2188 112 0 3 chr10 39645117 39645412 -105943876 - AluSq SINE Alu -19 294 1 848 292 73 27 chr10 39645614 39645830 -105943458 + MLT1J LTR MaLR 1 206 -305 238 67 44 0 chr10 39645830 39645875 -105943413 + T-rich Low_complexity Low_complexity 2 48 0 848 292 73 27 chr10 39645875 39646137 -105943151 + MLT1J LTR MaLR 206 501 -10 1613 171 49 11 chr10 39647070 39647357 -105941931 - AluJo SINE Alu -14 298 1 2196 113 3 10 chr10 39647866 39648177 -105941111 + AluSc SINE Alu 1 309 0 33 0 0 0 chr10 39648736 39648769 -105940519 + AT_rich Low_complexity Low_complexity 1 33 0 25 31 0 0 chr10 39648809 39648841 -105940447 + AT_rich Low_complexity Low_complexity 1 32 0 228 35 0 0 chr10 39648994 39649023 -105940265 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 218 179 0 0 chr10 39649399 39649438 -105939850 + CT-rich Low_complexity Low_complexity 2 40 0 23 78 0 0 chr10 39649683 39649734 -105939554 + AT_rich Low_complexity Low_complexity 1 51 0 21 0 0 0 chr10 39650107 39650128 -105939160 + AT_rich Low_complexity Low_complexity 1 21 0 942 218 39 4 chr10 39650139 39650396 -105938892 - L1MC3 LINE L1 -7 7778 7513 430 320 17 0 chr10 39652376 39652548 -105936740 - MIR SINE MIR -15 247 73 546 297 161 0 chr10 39652849 39653004 -105936284 - MER5A DNA MER1_type -1 188 9 264 256 13 0 chr10 39653012 39653090 -105936198 - ERVL LTR ERVL -2942 2822 2744 1771 218 34 8 chr10 39653595 39653981 -105935307 + MSTD LTR MaLR 1 396 0 640 219 8 0 chr10 39654251 39654370 -105934918 - FLAM_A SINE Alu -13 120 1 250 313 0 38 chr10 39654370 39654491 -105934797 + LTR67 LTR ERVL 417 534 -23 2402 57 0 23 chr10 39654883 39655184 -105934104 + AluY SINE Alu 1 294 -17 2134 101 7 7 chr10 39655314 39655621 -105933667 - AluY SINE Alu -4 307 1 1101 157 131 0 chr10 39657672 39657863 -105931425 - AluJo SINE Alu -15 297 82 2120 103 10 3 chr10 39658003 39658293 -105930995 - AluSq SINE Alu -21 292 1 450 294 65 49 chr10 39658465 39658649 -105930639 - MIR SINE MIR -68 194 8 1942 92 0 4 chr10 39658728 39658978 -105930310 + AluSx SINE Alu 1 249 -63 2084 123 0 0 chr10 39658979 39659272 -105930016 + AluSq SINE Alu 13 305 -8 292 259 33 33 chr10 39659376 39659580 -105929708 - L1ME LINE L1 -276 5894 5691 2542 57 0 0 chr10 39659641 39659940 -105929348 - AluY SINE Alu -12 299 1 1597 220 40 14 chr10 39662073 39662496 -105926792 - MER31B LTR ERV1 -31 435 2 595 140 10 0 chr10 39662599 39662699 -105926589 - MLT1E1 LTR MaLR -31 623 523 2251 102 0 7 chr10 39664190 39664494 -105924794 + AluSg SINE Alu 1 302 -8 505 215 71 92 chr10 39664677 39665003 -105924285 - MER114 LTR ERV -284 364 46 2170 102 0 3 chr10 39665206 39665539 -105923749 - AluY SINE Alu 0 332 1 27 62 0 0 chr10 39665693 39665741 -105923547 + AT_rich Low_complexity Low_complexity 1 48 0 2201 85 0 36 chr10 39665997 39666303 -105922985 + AluY SINE Alu 2 296 -15 2201 117 0 3 chr10 39666557 39666856 -105922432 - AluSx SINE Alu -14 298 1 1655 156 46 23 chr10 39667229 39667531 -105921757 + AluJb SINE Alu 4 312 0 524 236 0 39 chr10 39668151 39668278 -105921010 - FLAM_A SINE Alu -15 127 6 210 71 0 0 chr10 39668294 39668322 -105920966 + (CATTT)n Simple_repeat Simple_repeat 3 30 0 1256 223 37 7 chr10 39668322 39668591 -105920697 - AluJb SINE Alu -29 283 7 180 0 0 0 chr10 39669551 39669571 -105919717 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1446 173 53 50 chr10 39669842 39670143 -105919145 - AluJo SINE Alu 0 312 11 180 347 196 21 chr10 39670214 39670597 -105918691 - L2 LINE L2 -2238 1076 627 1052 311 94 24 chr10 39670651 39671152 -105918136 + MLT1H LTR MaLR 14 549 0 2718 48 3 0 chr10 39672417 39672752 -105916536 - L1PA4 LINE L1 0 6155 5820 5611 200 38 30 chr10 39672752 39672844 -105916444 + L1MB1 LINE L1 3850 3940 -2249 2011 159 27 14 chr10 39672844 39673214 -105916074 + THE1C LTR MaLR 1 375 0 5611 200 38 30 chr10 39673214 39675245 -105914043 + L1MB1 LINE L1 3940 5989 -200 569 254 12 12 chr10 39675243 39675487 -105913801 + L1M4 LINE L1 2257 2500 -3646 * 1117 153 22 18 chr10 39675507 39675736 -105913552 - Tigger2 DNA MER2_type -25 2693 2464 3566 181 23 20 chr10 39675799 39676010 -105913278 - Tigger2 DNA MER2_type -1974 744 535 2022 120 53 0 chr10 39676010 39676294 -105912994 - AluSq SINE Alu -14 299 1 3566 181 23 20 chr10 39676294 39676824 -105912464 - Tigger2 DNA MER2_type -2183 535 1 449 248 45 41 chr10 39676822 39677151 -105912137 - MLT1C LTR MaLR 0 467 54 * 503 283 34 42 chr10 39677218 39677394 -105911894 + L1M4 LINE L1 2558 2734 -3412 1701 151 34 14 chr10 39677394 39677686 -105911602 + AluJb SINE Alu 1 298 -14 503 283 34 42 chr10 39677686 39677741 -105911547 + L1M4 LINE L1 2734 2789 -3357 453 36 0 0 chr10 39677741 39677796 -105911492 + (TA)n Simple_repeat Simple_repeat 2 56 0 503 283 34 42 chr10 39677796 39677828 -105911460 + L1M4 LINE L1 2789 2820 -3326 1980 118 25 0 chr10 39677840 39678120 -105911168 + AluSx SINE Alu 5 291 -21 315 0 0 0 chr10 39678129 39678164 -105911124 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1805 172 0 3 chr10 39678213 39678516 -105910772 - AluJb SINE Alu -10 302 1 244 155 0 35 chr10 39678576 39678634 -105910654 + L1M4 LINE L1 2854 2909 -3237 2053 150 7 0 chr10 39678634 39678940 -105910348 + AluSc SINE Alu 1 308 -1 369 0 0 0 chr10 39678943 39678984 -105910304 + (GAAA)n Simple_repeat Simple_repeat 2 42 0 459 276 88 29 chr10 39678989 39679515 -105909773 + L1M4 LINE L1 2896 3452 -2694 850 216 39 86 chr10 39679630 39680032 -105909256 - MLT1A2 LTR MaLR 0 457 1 311 261 45 9 chr10 39680033 39680144 -105909144 + L1M4 LINE L1 3540 3654 -2492 283 230 31 126 chr10 39680143 39680469 -105908819 + L1M4 LINE L1 4594 4888 -1258 * 497 329 65 22 chr10 39680484 39680824 -105908464 - L2 LINE L2 -212 3101 2748 201 349 116 23 chr10 39680865 39680994 -105908294 + MIR3 SINE MIR 58 198 -10 39107 51 7 0 chr10 39681010 39686165 -105903123 - L1P LINE L1 -956 5190 2 393 191 0 0 chr10 39687388 39687493 -105901795 + (TG)n Simple_repeat Simple_repeat 1 105 0 29 28 0 0 chr10 39687561 39687597 -105901691 + AT_rich Low_complexity Low_complexity 1 36 0 212 276 0 23 chr10 39687744 39687831 -105901457 + (TA)n Simple_repeat Simple_repeat 2 86 0 25 0 0 0 chr10 39688352 39688377 -105900911 + AT_rich Low_complexity Low_complexity 1 25 0 1437 167 155 20 chr10 39688637 39688979 -105900309 - MLT1B LTR MaLR -2 388 1 258 327 82 31 chr10 39689294 39689376 -105899912 + L2 LINE L2 3136 3212 -101 2735 132 5 30 chr10 39689376 39689815 -105899473 - MSTA LTR MaLR 0 428 1 258 327 82 31 chr10 39689815 39689891 -105899397 + L2 LINE L2 3212 3302 -11 1196 245 68 91 chr10 39691098 39692114 -105897174 - L1MD3 LINE L1 0 8041 7060 2417 73 0 0 chr10 39692173 39692473 -105896815 - AluY SINE Alu -11 300 1 1852 181 32 3 chr10 39692925 39693263 -105896025 + MER7A DNA MER2_type 1 346 0 260 300 73 38 chr10 39693630 39693784 -105895504 - MIR3 SINE MIR -63 145 13 36537 55 4 8 chr10 39694555 39698872 -105890416 - L1PA4 LINE L1 -4 6151 1873 4505 35 4 0 chr10 39698872 39699412 -105889876 + L1PA2 LINE L1 5610 6151 -4 36537 55 4 8 chr10 39699412 39701268 -105888020 - L1PA4 LINE L1 -4282 1873 11 2227 89 0 0 chr10 39701275 39701556 -105887732 - AluY SINE Alu -19 292 12 466 349 64 18 chr10 39702310 39702528 -105886760 + MIR SINE MIR 31 258 -4 194 83 56 0 chr10 39702775 39702811 -105886477 + (CAGAGA)n Simple_repeat Simple_repeat 4 41 0 195 314 189 7 chr10 39702924 39703077 -105886211 - MIR SINE MIR -32 230 50 191 302 0 0 chr10 39703831 39703874 -105885414 - L2 LINE L2 -21 3251 3209 218 330 73 46 chr10 39704184 39704293 -105884995 - MIR SINE MIR 0 262 151 276 340 35 40 chr10 39704547 39704642 -105884646 + MIR SINE MIR 54 148 -114 2282 109 13 0 chr10 39704642 39704945 -105884343 + AluSx SINE Alu 1 307 -5 276 340 35 40 chr10 39704945 39705049 -105884239 + MIR SINE MIR 148 252 -10 335 245 43 32 chr10 39705183 39705277 -105884011 - MER5A DNA MER1_type -83 106 12 21 0 0 0 chr10 39705436 39705457 -105883831 + AT_rich Low_complexity Low_complexity 1 21 0 2165 123 3 3 chr10 39705458 39705768 -105883520 + AluSp SINE Alu 1 310 -3 2328 65 0 29 chr10 39705866 39706176 -105883112 - AluY SINE Alu -10 301 1 584 214 124 126 chr10 39706361 39706560 -105882728 + MLT1E2 LTR MaLR 122 365 -289 6881 51 0 0 chr10 39706591 39707806 -105881482 - L1PA6 LINE L1 -2 6152 4921 401 282 82 33 chr10 39708148 39708393 -105880895 - MIR SINE MIR -3 259 3 330 273 8 31 chr10 39709002 39709130 -105880158 + CT-rich Low_complexity Low_complexity 3 127 0 345 250 171 24 chr10 39710297 39710461 -105878827 - MIR SINE MIR -72 190 3 21 100 0 0 chr10 39710596 39710666 -105878622 + AT_rich Low_complexity Low_complexity 1 70 0 225 313 53 52 chr10 39711470 39711691 -105877597 + MIR SINE MIR 30 248 -14 1661 230 38 26 chr10 39711944 39712475 -105876813 + L1ME1 LINE L1 5625 6161 -5 229 271 173 38 chr10 39712652 39712785 -105876503 - MIR SINE MIR -108 154 4 339 44 0 0 chr10 39712843 39712888 -105876400 + (CA)n Simple_repeat Simple_repeat 2 46 0 727 251 48 91 chr10 39713007 39713445 -105875843 + MLT1J1 LTR MaLR 28 446 0 1298 263 49 7 chr10 39713482 39713893 -105875395 - MER57B LTR ERV1 -6 428 1 275 50 25 0 chr10 39714983 39715023 -105874265 + MADE1 DNA Mariner 1 41 -39 349 347 72 0 chr10 39715605 39715772 -105873516 + MIR SINE MIR 76 254 -8 2215 84 61 7 chr10 39716902 39717199 -105872089 + AluSq SINE Alu 1 313 0 1346 145 41 5 chr10 39717563 39717784 -105871504 + MER30 DNA MER1_type 2 230 0 340 263 74 0 chr10 39717864 39717959 -105871329 - L2 LINE L2 -4 3309 3208 643 249 37 6 chr10 39719068 39719344 -105869944 - MER2 DNA MER2_type -1 344 1 2460 61 3 0 chr10 39719476 39719773 -105869515 - AluY SINE Alu -9 302 5 342 336 114 0 chr10 39720064 39720195 -105869093 + MIR3 SINE MIR 54 199 -9 215 338 61 47 chr10 39721654 39721802 -105867486 + L2 LINE L2 3106 3255 -17 476 318 30 25 chr10 39721948 39722146 -105867142 - MIR SINE MIR -6 256 58 215 203 17 0 chr10 39722203 39722262 -105867026 + (TG)n Simple_repeat Simple_repeat 2 61 0 1554 109 47 33 chr10 39722525 39722799 -105866489 - L1PA13 LINE L1 -18 6145 5868 2243 106 0 0 chr10 39722799 39723120 -105866168 + L1P4 LINE L1 5445 5765 -398 201 321 0 0 chr10 39723968 39724024 -105865264 + L2 LINE L2 3000 3055 -217 194 339 46 0 chr10 39724174 39724239 -105865049 + L2 LINE L2 3241 3308 -5 25 0 0 0 chr10 39725657 39725682 -105863606 + AT_rich Low_complexity Low_complexity 1 25 0 286 247 0 12 chr10 39726044 39726129 -105863159 + (TA)n Simple_repeat Simple_repeat 1 84 0 1809 119 0 12 chr10 39726253 39726505 -105862783 - AluSc SINE Alu -60 249 1 27 0 0 0 chr10 39726999 39727026 -105862262 + AT_rich Low_complexity Low_complexity 1 27 0 2388 91 0 0 chr10 39727351 39727649 -105861639 - AluY SINE Alu -13 298 1 218 346 23 38 chr10 39728395 39728528 -105860760 - MIR SINE MIR -10 252 122 2308 126 3 50 chr10 39728563 39728639 -105860649 - THE1B LTR MaLR 0 364 286 2161 101 0 54 chr10 39728639 39728955 -105860333 + AluSq SINE Alu 1 299 -14 2308 126 3 50 chr10 39728955 39729260 -105860028 - THE1B LTR MaLR -78 286 1 201 74 0 0 chr10 39729674 39729701 -105859587 + (T)n Simple_repeat Simple_repeat 1 27 0 1776 121 10 42 chr10 39730176 39730483 -105858805 + AluY SINE Alu 1 297 -14 207 219 0 0 chr10 39732151 39732192 -105857096 - MIR3 SINE MIR -53 155 115 1411 200 8 95 chr10 39732196 39732596 -105856692 - MLT1A1 LTR MaLR 0 365 1 1415 222 26 36 chr10 39733093 39733512 -105855776 - MLT1C LTR MaLR 0 467 53 180 200 0 0 chr10 39734066 39734106 -105855182 + CT-rich Low_complexity Low_complexity 2 41 0 1752 164 33 41 chr10 39734234 39734600 -105854688 + MLT1A1 LTR MaLR 1 363 -2 438 311 47 16 chr10 39734645 39734835 -105854453 - MIR SINE MIR -46 216 21 229 236 56 14 chr10 39735227 39735299 -105853989 - MIR SINE MIR -69 193 119 211 206 33 98 chr10 39735302 39735394 -105853894 - L3 LINE CR1 -166 1411 1326 215 344 54 11 chr10 39735580 39735673 -105853615 - L2 LINE L2 -4 3268 3172 223 93 256 0 chr10 39735792 39735835 -105853453 - MIR3 SINE MIR -33 175 122 526 239 29 58 chr10 39736177 39736382 -105852906 + MER20 DNA MER1_type 1 199 -20 242 220 68 0 chr10 39736581 39736640 -105852648 + L2 LINE L2 3209 3271 -1 2234 111 3 3 chr10 39736747 39737044 -105852244 - AluSc SINE Alu -12 297 1 699 65 11 0 chr10 39737645 39737768 -105851520 + AluSg/x SINE Alu 191 314 0 207 225 34 146 chr10 39738326 39738415 -105850873 + L2 LINE L2 3234 3312 -1 1065 147 0 0 chr10 39738651 39738833 -105850455 - AluSg/x SINE Alu 0 311 130 1757 187 0 0 chr10 39738907 39739206 -105850082 - AluJo SINE Alu -13 299 1 21 57 0 0 chr10 39739278 39739313 -105849975 + AT_rich Low_complexity Low_complexity 1 35 0 216 0 0 0 chr10 39739501 39739525 -105849763 + (TG)n Simple_repeat Simple_repeat 1 24 0 2036 141 10 0 chr10 39739526 39739825 -105849463 - AluSq SINE Alu -11 302 1 1683 158 30 33 chr10 39739827 39740130 -105849158 - AluJb SINE Alu -10 302 1 2792 16 0 0 chr10 39740607 39740918 -105848370 + AluY SINE Alu 1 311 0 209 233 0 0 chr10 39741129 39741172 -105848116 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 212 290 103 56 chr10 39741180 39741287 -105848001 - L2 LINE L2 -12 3301 3190 733 169 8 0 chr10 39743475 39743593 -105845695 + FLAM_C SINE Alu 3 121 -12 505 131 0 24 chr10 39743623 39743707 -105845581 + AluJb SINE Alu 212 293 -19 301 276 9 57 chr10 39743811 39743916 -105845372 + L2 LINE L2 2221 2320 -994 270 284 67 45 chr10 39744115 39744249 -105845039 + L2 LINE L2 2644 2780 -534 1344 140 0 5 chr10 39744670 39744891 -105844397 - pTR5 LTR ERV1 -2047 391 172 270 258 21 0 chr10 39744894 39744991 -105844297 - LTR30 LTR ERV1 -80 642 544 4698 146 76 26 chr10 39744992 39746081 -105843207 - pTR5 LTR ERV1 -439 1798 57 29 70 0 0 chr10 39746166 39746223 -105843065 + AT_rich Low_complexity Low_complexity 1 57 0 660 150 60 51 chr10 39746367 39746566 -105842722 - MER6 DNA MER2_type 0 865 -65 243 0 0 0 chr10 39746801 39746828 -105842460 + (TG)n Simple_repeat Simple_repeat 2 28 0 1222 163 6 139 chr10 39746998 39747336 -105841952 + AluJb SINE Alu 10 302 -10 2350 68 3 13 chr10 39748083 39748393 -105840895 - AluY SINE Alu -4 307 1 376 282 112 12 chr10 39749180 39749350 -105839938 + MIR SINE MIR 21 207 -55 857 219 0 12 chr10 39750673 39750833 -105838455 + FRAM SINE Alu 2 159 -7 530 117 0 0 chr10 39751282 39751359 -105837929 - AluS SINE Alu -236 77 1 406 104 45 0 chr10 39751381 39751448 -105837840 - MER41B LTR ERV1 -87 548 479 1963 127 29 23 chr10 39751599 39751907 -105837381 + AluY SINE Alu 1 310 -1 21 36 0 0 chr10 39752104 39752132 -105837156 + AT_rich Low_complexity Low_complexity 1 28 0 564 268 109 5 chr10 39752599 39752819 -105836469 + L1ME3A LINE L1 5364 5606 -556 682 271 21 50 chr10 39752927 39753267 -105836021 + L1ME3A LINE L1 5611 5940 -230 295 338 52 42 chr10 39754603 39754816 -105834472 + MIR SINE MIR 20 234 -28 219 204 0 0 chr10 39755355 39755399 -105833889 - L2 LINE L2 -7 3306 3263 313 369 72 22 chr10 39755509 39755731 -105833557 + MIR SINE MIR 4 236 -26 623 325 26 18 chr10 39757182 39757410 -105831878 - MIR SINE MIR -30 232 3 189 214 0 54 chr10 39757619 39757675 -105831613 + MIR SINE MIR 203 255 -7 44 35 0 0 chr10 39758881 39758939 -105830349 + AT_rich Low_complexity Low_complexity 1 58 0 335 313 15 80 chr10 39758946 39759147 -105830141 - HAL1 LINE L1 -96 2411 2224 386 287 174 6 chr10 39760680 39760847 -105828441 - MIR SINE MIR -34 228 34 318 326 56 0 chr10 39761029 39761118 -105828170 - L2 LINE L2 -36 3236 3143 627 267 87 20 chr10 39761154 39761349 -105827939 - MLT1J2 LTR MaLR 0 450 243 492 222 28 9 chr10 39761360 39761468 -105827820 - MLT1J2 LTR MaLR -340 110 1 3928 190 57 8 chr10 39761673 39762424 -105826864 - MER21B LTR ERV1 -75 788 1 188 333 126 0 chr10 39762424 39762559 -105826729 - L2 LINE L2 -61 3252 3101 24 0 0 0 chr10 39762764 39762788 -105826500 + AT_rich Low_complexity Low_complexity 1 24 0 201 286 209 0 chr10 39763040 39763145 -105826143 - L2 LINE L2 -842 2472 2346 23 0 0 0 chr10 39763249 39763272 -105826016 + AT_rich Low_complexity Low_complexity 1 23 0 221 326 111 7 chr10 39763387 39763522 -105825766 - MIR SINE MIR -70 192 44 32 86 0 0 chr10 39763781 39763862 -105825426 + AT_rich Low_complexity Low_complexity 1 81 0 194 319 77 44 chr10 39764198 39764289 -105824999 - L2 LINE L2 0 3272 3179 448 248 18 9 chr10 39764377 39764486 -105824802 - L2 LINE L2 -5 3308 3199 2011 107 68 0 chr10 39764487 39764768 -105824520 - AluSc SINE Alu -9 300 1 216 0 0 0 chr10 39764778 39764802 -105824486 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 911 74 8 0 chr10 39764806 39764928 -105824360 - L1P3 LINE L1 -574 5598 5476 4415 37 4 4 chr10 39764928 39765463 -105823825 + L1PA8 LINE L1 5635 6171 -1 252 340 215 0 chr10 39765555 39765699 -105823589 - L2 LINE L2 -296 3017 2843 279 304 22 0 chr10 39765834 39765926 -105823362 + (TATATG)n Simple_repeat Simple_repeat 1 94 0 233 276 17 0 chr10 39765928 39765986 -105823302 + GA-rich Low_complexity Low_complexity 3 61 0 308 230 53 53 chr10 39765988 39766101 -105823187 + L1MD3 LINE L1 7656 7980 -15 417 282 123 21 chr10 39766149 39766348 -105822940 + MIR SINE MIR 36 261 -1 303 364 33 0 chr10 39766503 39766624 -105822664 - L2 LINE L2 -11 3261 3137 280 318 15 145 chr10 39767055 39767455 -105821833 - L3 LINE CR1 -229 1348 1001 24 32 0 0 chr10 39767548 39767579 -105821709 + AT_rich Low_complexity Low_complexity 1 31 0 1597 196 141 0 chr10 39767972 39768319 -105820969 + MSTD LTR MaLR 1 396 0 388 339 85 22 chr10 39768608 39768832 -105820456 - MIR SINE MIR 0 262 25 482 327 84 63 chr10 39768854 39769236 -105820052 - L2 LINE L2 -7 3306 2917 2147 221 75 0 chr10 39770003 39770473 -105818815 - MLT1D LTR MaLR 0 505 1 411 318 39 31 chr10 39770731 39770989 -105818299 - MIR SINE MIR 0 262 3 707 256 163 0 chr10 39772428 39772631 -105816657 - MIR SINE MIR -25 237 2 2129 135 3 0 chr10 39773347 39773650 -105815638 + AluSx SINE Alu 1 304 -8 2757 222 50 12 chr10 39773781 39774636 -105814652 + L1MB7 LINE L1 5281 6168 -16 1442 175 73 110 chr10 39775262 39775725 -105813563 + MLT1D LTR MaLR 1 446 -59 6613 152 18 14 chr10 39775752 39777964 -105811324 + L1MA4 LINE L1 4082 6300 0 351 65 0 0 chr10 39779023 39779069 -105810219 + (CAAT)n Simple_repeat Simple_repeat 2 47 0 354 326 74 0 chr10 39780292 39780427 -105808861 - MIR SINE MIR -47 215 71 247 264 88 0 chr10 39780478 39780569 -105808719 - MIR SINE MIR -70 192 94 1467 131 146 11 chr10 39781160 39781427 -105807861 + AluSq SINE Alu 1 303 0 1406 248 35 5 chr10 39782526 39782666 -105806622 + MLT1C LTR MaLR 53 187 -280 501 17 0 0 chr10 39782666 39782724 -105806564 + (CA)n Simple_repeat Simple_repeat 2 59 0 1406 248 35 5 chr10 39782724 39782978 -105806310 + MLT1C LTR MaLR 187 459 -8 297 311 54 81 chr10 39783129 39783351 -105805937 - MIR SINE MIR -11 251 36 194 350 144 21 chr10 39784735 39785123 -105804165 + L2 LINE L2 2451 2886 -428 2439 81 0 0 chr10 39785242 39785539 -105803749 + AluSg1 SINE Alu 1 297 -12 1975 145 14 0 chr10 39785747 39786037 -105803251 - MER1B DNA MER1_type 0 339 46 1357 214 83 36 chr10 39786357 39786693 -105802595 + MLT1A2 LTR MaLR 23 374 0 191 368 35 21 chr10 39787509 39787653 -105801635 - L2 LINE L2 0 3313 3168 239 341 0 12 chr10 39787848 39787930 -105801358 + MIR3 SINE MIR 15 95 -113 396 268 30 61 chr10 39788113 39788277 -105801011 - MER5B DNA MER1_type -1 177 19 216 376 112 35 chr10 39788424 39788482 -105800806 + L2 LINE L2 2906 2958 -314 2004 155 0 3 chr10 39788482 39788791 -105800497 - AluSc SINE Alu -1 308 1 216 376 112 35 chr10 39788791 39789072 -105800216 + L2 LINE L2 2958 3271 -1 4030 136 91 77 chr10 39789798 39790863 -105798425 - pTR5 LTR ERV1 0 2438 1131 180 200 0 0 chr10 39791612 39791652 -105797636 + CT-rich Low_complexity Low_complexity 2 41 0 1758 164 33 41 chr10 39791780 39792146 -105797142 + MLT1A1 LTR MaLR 1 363 -2 442 311 47 16 chr10 39792191 39792381 -105796907 - MIR SINE MIR -46 216 21 232 236 56 14 chr10 39792773 39792845 -105796443 - MIR SINE MIR -69 193 119 213 206 33 98 chr10 39792848 39792940 -105796348 - L3 LINE CR1 -166 1411 1326 218 344 54 11 chr10 39793126 39793219 -105796069 - L2 LINE L2 -4 3268 3172 220 93 256 0 chr10 39793338 39793381 -105795907 - MIR3 SINE MIR -33 175 122 591 239 29 58 chr10 39793723 39793928 -105795360 + MER20 DNA MER1_type 1 199 -20 243 220 68 0 chr10 39794127 39794186 -105795102 + L2 LINE L2 3209 3271 -1 2235 91 3 0 chr10 39794294 39794581 -105794707 - AluSq SINE Alu -12 301 14 1171 27 0 14 chr10 39794581 39794729 -105794559 + L1PA4 LINE L1 6009 6154 -1 24 77 0 0 chr10 39795236 39795288 -105794000 + AT_rich Low_complexity Low_complexity 1 52 0 251 154 15 0 chr10 39795500 39795565 -105793723 + (TA)n Simple_repeat Simple_repeat 1 66 0 183 129 0 0 chr10 39796355 39796386 -105792902 + (TA)n Simple_repeat Simple_repeat 2 32 0 297 51 0 0 chr10 39796450 39796489 -105792799 + (TCTA)n Simple_repeat Simple_repeat 3 41 0 332 289 15 0 chr10 39796490 39796625 -105792663 + (TA)n Simple_repeat Simple_repeat 2 138 0 1851 111 0 11 chr10 39797232 39797493 -105791795 + AluSx SINE Alu 41 298 -14 206 213 27 13 chr10 39798098 39798173 -105791115 + (TAAA)n Simple_repeat Simple_repeat 3 78 0 346 287 16 0 chr10 39798243 39798425 -105790863 + (TA)n Simple_repeat Simple_repeat 1 184 0 217 241 12 24 chr10 39798395 39798478 -105790810 + (CA)n Simple_repeat Simple_repeat 2 83 0 * 194 83 56 0 chr10 39799104 39799140 -105790148 + (TCTCTG)n Simple_repeat Simple_repeat 4 41 0 476 349 64 18 chr10 39799387 39799605 -105789683 - MIR SINE MIR -4 258 31 2225 89 0 0 chr10 39800359 39800640 -105788648 + AluY SINE Alu 12 292 -19 10559 84 6 0 chr10 39800647 39802471 -105786817 + L1P LINE L1 11 1842 -4304 180 0 0 0 chr10 39802471 39802491 -105786797 + (T)n Simple_repeat Simple_repeat 1 20 0 43544 49 6 1 chr10 39802500 39808623 -105780665 - L1PA2 LINE L1 0 6155 1 349 363 51 39 chr10 39910134 39910324 -105678964 - L1ME4a LINE L1 -38 6083 5897 2313 101 0 0 chr10 39910324 39910631 -105678657 - AluSg SINE Alu -3 307 1 2148 132 0 0 chr10 39910633 39910943 -105678345 - AluSx SINE Alu -2 310 1 349 363 51 39 chr10 39910943 39910983 -105678305 - L1ME4a LINE L1 -224 5897 5847 337 232 20 10 chr10 39911198 39911297 -105677991 + L1MC4a LINE L1 5844 5943 -1865 1308 217 45 67 chr10 39911311 39911712 -105677576 + MLT1I LTR MaLR 16 407 -2 1782 126 49 7 chr10 39911813 39912099 -105677189 - AluSq SINE Alu -15 298 1 21 36 0 0 chr10 39912103 39912131 -105677157 + AT_rich Low_complexity Low_complexity 1 28 0 673 114 0 141 chr10 39912131 39912248 -105677040 + AluSg/x SINE Alu 182 275 -37 216 86 0 0 chr10 39912248 39912283 -105677005 + (TTAA)n Simple_repeat Simple_repeat 2 36 0 673 114 0 141 chr10 39912283 39912314 -105676974 + AluSg/x SINE Alu 275 309 -3 533 161 0 11 chr10 39912320 39912407 -105676881 - FLAM_C SINE Alu -23 120 35 324 270 36 0 chr10 39912873 39913010 -105676278 - L1MC4 LINE L1 0 8042 7901 1898 132 0 65 chr10 39913016 39913138 -105676150 + AluJb SINE Alu 1 129 -183 320 0 25 0 chr10 39913138 39913178 -105676110 + (CAA)n Simple_repeat Simple_repeat 2 42 0 1898 132 0 65 chr10 39913178 39913380 -105675908 + AluJb SINE Alu 129 304 -8 2267 95 7 3 chr10 39913381 39913685 -105675603 + AluSq SINE Alu 2 306 -7 484 95 0 0 chr10 39913685 39913748 -105675540 + Alu SINE Alu 2 64 -245 388 314 63 51 chr10 39913873 39913986 -105675302 - L1MC4 LINE L1 -306 7736 7619 2412 66 0 3 chr10 39913986 39914291 -105674997 - AluY SINE Alu -7 304 1 388 314 63 51 chr10 39914291 39914352 -105674936 - L1MC4 LINE L1 -423 7619 7560 881 99 41 0 chr10 39914390 39914511 -105674777 - FLAM_C SINE Alu -7 126 1 510 273 7 7 chr10 39914514 39914657 -105674631 - L1MC4 LINE L1 -454 7588 7446 1543 172 0 22 chr10 39914748 39915016 -105674272 - AluJo SINE Alu -50 262 1 415 129 0 0 chr10 39915016 39915078 -105674210 - MLT1B LTR MaLR -53 337 276 261 220 0 0 chr10 39915073 39915123 -105674165 - AluJ/monomer SINE Alu -250 50 1 * 311 193 12 24 chr10 39915123 39915206 -105674082 - L1MC4 LINE L1 -766 7276 7195 2055 129 20 0 chr10 39915206 39915500 -105673788 - AluSg SINE Alu -10 300 1 240 242 32 0 chr10 39915730 39915792 -105673496 - L1ME LINE L1 -299 5822 5759 5086 153 138 23 chr10 39915795 39916941 -105672347 - MER52C LTR ERV1 0 1278 1 231 317 20 0 chr10 39916941 39917042 -105672246 - L1ME LINE L1 -363 5758 5656 2300 97 3 0 chr10 39917043 39917352 -105671936 - AluSg SINE Alu 0 310 1 421 133 0 0 chr10 39917358 39917418 -105671870 - AluS SINE Alu -258 60 1 447 67 0 0 chr10 39917424 39917484 -105671804 - Alu SINE Alu -258 60 1 373 326 51 69 chr10 39918137 39918241 -105671047 + L2 LINE L2 2909 3010 -303 1942 133 0 42 chr10 39918241 39918550 -105670738 - AluSx SINE Alu -16 296 1 373 326 51 69 chr10 39918550 39918620 -105670668 + L2 LINE L2 3010 3080 -233 1796 95 0 4 chr10 39918620 39918861 -105670427 + AluSg SINE Alu 1 240 -70 1344 92 0 20 chr10 39918961 39919157 -105670131 - AluSx SINE Alu -120 192 1 244 335 38 65 chr10 39919282 39919483 -105669805 + L2 LINE L2 2545 2733 -581 2496 61 3 0 chr10 39919483 39919793 -105669495 + AluY SINE Alu 1 311 0 244 335 38 65 chr10 39919793 39919961 -105669327 + L2 LINE L2 2733 2904 -410 1348 167 0 0 chr10 39920014 39920236 -105669052 + AluJb SINE Alu 1 222 -90 449 129 0 0 chr10 39920336 39920398 -105668890 + AluS SINE Alu 231 292 -18 2079 92 6 60 chr10 39920411 39920726 -105668562 + AluSg SINE Alu 3 300 -10 1883 164 0 3 chr10 39920788 39921081 -105668207 - AluJb SINE Alu -14 298 7 275 278 0 33 chr10 39921103 39921193 -105668095 - MER81 DNA DNA -7 107 21 566 257 7 21 chr10 39921193 39921333 -105667955 + L2 LINE L2 3176 3313 0 951 181 5 27 chr10 39921577 39921765 -105667523 - AluJ SINE Alu 0 312 129 797 107 25 19 chr10 39921865 39922053 -105667235 - L1P LINE L1 -740 5411 5223 561 261 0 0 chr10 39922065 39922203 -105667085 - L1 LINE L1 -1137 5009 4872 252 141 0 84 chr10 39922207 39922278 -105667010 + MER21A LTR ERV1 861 925 -6 416 191 14 164 chr10 39922285 39922505 -105666783 + L2 LINE L2 3125 3311 -2 381 315 192 3 chr10 39922479 39922822 -105666466 - L2 LINE L2 -10 3303 2896 * 826 274 173 43 chr10 39923229 39923994 -105665294 + L2 LINE L2 2426 3310 -3 330 269 8 34 chr10 39924016 39924135 -105665153 + MIR SINE MIR 146 261 -1 287 258 52 21 chr10 39924183 39924280 -105665008 + MIR3 SINE MIR 55 154 -54 220 317 98 8 chr10 39924337 39924460 -105664828 - L2 LINE L2 -712 2602 2469 748 146 7 51 chr10 39924538 39924675 -105664613 - AluJ SINE Alu -181 131 1 2199 122 0 0 chr10 39924696 39925008 -105664280 - AluSx SINE Alu 0 312 1 22 0 0 0 chr10 39926505 39926527 -105662761 + GC_rich Low_complexity Low_complexity 1 22 0 189 317 169 48 chr10 39927837 39928086 -105661202 - L2 LINE L2 -415 2899 2621 2236 111 0 3 chr10 39928464 39928771 -105660517 - AluSg SINE Alu -4 306 1 2033 86 4 0 chr10 39928771 39929039 -105660249 - AluSp SINE Alu -12 301 32 1443 181 38 0 chr10 39929139 39929405 -105659883 + AluJo SINE Alu 25 300 -12 2021 89 4 4 chr10 39930017 39930287 -105659001 + AluSx SINE Alu 41 310 -2 730 153 9 0 chr10 39930293 39930404 -105658884 - FLAM_C SINE Alu -26 117 6 242 116 23 0 chr10 39930457 39930500 -105658788 + CT-rich Low_complexity Low_complexity 3 46 0 1121 186 9 28 chr10 39930503 39930718 -105658570 - AluJo SINE Alu -2 310 100 227 188 42 0 chr10 39930742 39930790 -105658498 - L1MB7 LINE L1 -32 6152 6103 782 245 78 5 chr10 39930813 39931017 -105658271 + MER20 DNA MER1_type 1 219 0 635 251 163 0 chr10 39933217 39933444 -105655844 - MLT1E1 LTR MaLR -13 641 378 390 195 40 1 chr10 39933471 39933631 -105655657 - MLT1E1 LTR MaLR -407 217 35 25 0 0 0 chr10 39933678 39933703 -105655585 + AT_rich Low_complexity Low_complexity 1 25 0 697 164 66 0 chr10 39933703 39933825 -105655463 + AluJo SINE Alu 1 130 -182 1056 191 68 38 chr10 39934257 39934550 -105654738 + MER21B LTR ERV1 13 314 -549 2163 103 0 0 chr10 39934553 39934866 -105654422 + AluSx SINE Alu 1 313 0 822 216 7 0 chr10 39934869 39935022 -105654266 + AluJo SINE Alu 137 290 -12 1764 171 7 0 chr10 39935022 39935302 -105653986 + AluSx SINE Alu 3 284 -28 788 253 61 7 chr10 39935332 39935628 -105653660 + L1MC4a LINE L1 5262 5573 -591 2162 112 3 3 chr10 39935803 39936106 -105653182 - AluSx SINE Alu -9 303 1 665 476 0 48 chr10 39936187 39936414 -105652874 - AluJo SINE Alu -94 218 3 309 310 26 26 chr10 39936422 39936577 -105652711 + L1MC4a LINE L1 5865 6019 -1789 2382 71 0 7 chr10 39936669 39936979 -105652309 + AluY SINE Alu 1 308 -3 2113 120 13 0 chr10 39936979 39937303 -105651985 + AluSq SINE Alu 1 313 0 382 297 77 45 chr10 39937385 39937540 -105651748 - L1MC4a LINE L1 -1834 5974 5815 1484 189 62 7 chr10 39937555 39937846 -105651442 + AluJo SINE Alu 1 307 -5 1592 178 0 7 chr10 39937851 39938120 -105651168 + AluJo SINE Alu 1 267 -45 844 101 0 8 chr10 39938122 39938251 -105651037 - AluSg/x SINE Alu -1 311 184 700 171 18 29 chr10 39938356 39938526 -105650762 + L1MB7 LINE L1 5994 6161 -23 248 329 32 71 chr10 39938616 39938899 -105650389 - L2 LINE L2 -474 2840 2569 2237 61 20 10 chr10 39939131 39939424 -105649864 + AluY SINE Alu 1 296 -15 1553 195 10 7 chr10 39939427 39939725 -105649563 + AluJo SINE Alu 1 299 -13 559 218 19 21 chr10 39940403 39940558 -105648730 - MIR SINE MIR -65 143 41 207 236 139 0 chr10 39940667 39940739 -105648549 - L2 LINE L2 -29 3284 3203 498 213 47 31 chr10 39940765 39940892 -105648396 - MIR SINE MIR -122 140 12 446 253 120 0 chr10 39940951 39941109 -105648179 - L1M4c LINE L1 -4787 1597 1421 1870 122 0 7 chr10 39941623 39941894 -105647394 + AluSx SINE Alu 20 288 -24 923 146 39 63 chr10 39942765 39942970 -105646318 - AluJo SINE Alu -47 265 66 245 212 126 86 chr10 39945156 39945307 -105643981 - MIR SINE MIR -75 187 31 314 313 0 0 chr10 39946457 39946540 -105642748 + L2 LINE L2 3230 3312 -1 23 68 0 0 chr10 39947904 39947948 -105641340 + GC_rich Low_complexity Low_complexity 1 44 0 57 61 0 0 chr10 39948218 39948317 -105640971 + GC_rich Low_complexity Low_complexity 1 99 0 210 270 7 36 chr10 39948497 39948634 -105640654 + GA-rich Low_complexity Low_complexity 3 135 0 1759 159 0 34 chr10 39948789 39949110 -105640178 - AluJb SINE Alu 0 312 3 541 248 7 35 chr10 39949117 39949258 -105640030 - MIR SINE MIR -70 192 56 192 346 144 0 chr10 39949791 39949895 -105639393 + L2 LINE L2 3138 3256 -16 411 158 18 18 chr10 39949913 39950027 -105639261 + (TGGA)n Simple_repeat Simple_repeat 1 114 0 654 211 35 6 chr10 39950130 39950451 -105638837 + (TGGA)n Simple_repeat Simple_repeat 1 330 0 306 271 25 34 chr10 39950706 39950824 -105638464 + (TGGA)n Simple_repeat Simple_repeat 1 117 0 672 234 5 58 chr10 39950827 39950901 -105638387 + MER105 DNA DNA 6 82 -122 2389 81 3 0 chr10 39950901 39951208 -105638080 - AluSp SINE Alu -5 308 1 672 234 5 58 chr10 39951208 39951338 -105637950 + MER105 DNA DNA 82 199 -5 965 181 0 23 chr10 39951437 39951608 -105637680 + AluSg/x SINE Alu 133 299 -11 2316 88 0 0 chr10 39951620 39951914 -105637374 + AluSx SINE Alu 1 294 -18 268 199 39 66 chr10 39951919 39952100 -105637188 + (CGGGA)n Simple_repeat Simple_repeat 3 178 0 800 130 0 0 chr10 39952391 39952506 -105636782 - AluJo SINE Alu -41 271 157 577 142 42 67 chr10 39952510 39952630 -105636658 - AluJo SINE Alu -195 117 1 322 303 7 21 chr10 39952630 39952775 -105636513 + CT-rich Low_complexity Low_complexity 2 144 0 357 306 75 45 chr10 39953378 39953760 -105635528 - LTR16B LTR ERVL 0 464 8 243 245 0 0 chr10 39954164 39954226 -105635062 + CT-rich Low_complexity Low_complexity 1 62 0 611 108 47 7 chr10 39954898 39955335 -105633953 + MSR1 Satellite Satellite 1 454 -30 2117 98 0 74 chr10 39956182 39956519 -105632769 + AluSx SINE Alu 1 312 0 679 94 15 12 chr10 39956896 39957222 -105632066 - MSR1 Satellite Satellite 0 327 1 207 114 0 0 chr10 39957969 39958004 -105631284 + (TC)n Simple_repeat Simple_repeat 2 36 0 674 107 9 2 chr10 39958299 39958884 -105630404 - MSR1 Satellite Satellite 0 589 1 384 244 41 57 chr10 39959774 39959897 -105629391 - MIR SINE MIR -40 222 102 2110 118 0 0 chr10 39960010 39960306 -105628982 + AluSx SINE Alu 1 296 -16 2143 82 3 39 chr10 39960309 39960639 -105628649 + AluSg SINE Alu 1 310 0 295 261 32 32 chr10 39960962 39961170 -105628118 + (TCTCTG)n Simple_repeat Simple_repeat 1 208 0 268 239 22 36 chr10 39962165 39962303 -105626985 + (CGGG)n Simple_repeat Simple_repeat 1 136 0 206 247 21 21 chr10 39962449 39962542 -105626746 + C-rich Low_complexity Low_complexity 4 96 0 612 91 23 19 chr10 39962898 39963123 -105626165 + MSR1 Satellite Satellite 1 225 -1 2418 73 3 13 chr10 39964342 39964658 -105624630 + AluSp SINE Alu 1 313 0 566 151 38 19 chr10 39965149 39965255 -105624033 + AluJo/FLAM SINE Alu 5 112 -200 1866 128 0 17 chr10 39965255 39965573 -105623715 - AluSx SINE Alu 0 312 1 22 56 0 0 chr10 39965951 39965987 -105623301 + GC_rich Low_complexity Low_complexity 1 36 0 2185 94 0 33 chr10 39966737 39967044 -105622244 - AluSx SINE Alu -15 297 1 440 267 90 99 chr10 39967130 39967316 -105621972 + L1ME4a LINE L1 5692 5878 -243 779 194 0 0 chr10 39967316 39967445 -105621843 + FLAM_C SINE Alu 1 129 -4 440 267 90 99 chr10 39967445 39967670 -105621618 + L1ME4a LINE L1 5878 6099 -22 328 287 29 44 chr10 39967846 39967982 -105621306 - MIR SINE MIR -58 150 17 589 77 0 2 chr10 39968254 39968463 -105620825 + AluSp SINE Alu 1 243 -70 447 143 0 0 chr10 39968671 39968741 -105620547 - AluS SINE Alu -21 290 221 194 0 39 0 chr10 39968772 39968798 -105620490 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 636 86 30 6 chr10 39970024 39970667 -105618621 - MSR1 Satellite Satellite 0 658 1 695 78 13 0 chr10 39971498 39972148 -105617140 - MSR1 Satellite Satellite 0 658 1 2376 91 7 0 chr10 39974095 39974404 -105614884 - AluSx SINE Alu -1 311 1 328 161 0 0 chr10 39974417 39974473 -105614815 - L2 LINE L2 -17 3296 3241 451 169 11 0 chr10 39974492 39974581 -105614707 + MER20 DNA MER1_type 80 169 -50 696 262 159 12 chr10 39974586 39974956 -105614332 - L2 LINE L2 -254 3059 2637 681 199 50 103 chr10 39974956 39975104 -105614184 + L1MB5 LINE L1 5889 6019 -155 2151 86 7 30 chr10 39975104 39975408 -105613880 - AluSx SINE Alu -15 297 1 681 199 50 103 chr10 39975408 39975520 -105613768 + L1MB5 LINE L1 6019 6135 -39 251 75 0 4 chr10 39975580 39975753 -105613535 + AluSg1 SINE Alu 11 248 -52 1030 196 21 0 chr10 39975753 39975947 -105613341 + AluJo SINE Alu 85 282 -30 782 133 42 0 chr10 39975947 39976067 -105613221 - FLAM_C SINE Alu -4 139 15 542 161 11 11 chr10 39976065 39976158 -105613130 - FRAM SINE Alu -43 133 41 * 1863 161 3 3 chr10 39976173 39976472 -105612816 - AluJb SINE Alu -13 299 1 283 240 70 30 chr10 39976623 39976723 -105612565 - L2 LINE L2 0 3313 3210 186 171 0 0 chr10 39976952 39976993 -105612295 + G-rich Low_complexity Low_complexity 1 41 0 225 311 0 16 chr10 39977708 39977830 -105611458 + (CCGGG)n Simple_repeat Simple_repeat 4 123 0 * 381 280 6 23 chr10 39977754 39977929 -105611359 + (CGGGG)n Simple_repeat Simple_repeat 1 172 0 216 298 0 0 chr10 39979504 39979561 -105609727 + MIR SINE MIR 76 132 -76 269 286 10 20 chr10 39980390 39980488 -105608800 + CT-rich Low_complexity Low_complexity 3 99 0 615 254 22 54 chr10 39980670 39980855 -105608433 + MIR SINE MIR 49 227 -35 699 215 70 15 chr10 39981636 39981836 -105607452 + MER20 DNA MER1_type 9 219 0 2347 94 3 0 chr10 39981862 39982170 -105607118 - AluSp SINE Alu -4 309 1 1903 147 19 3 chr10 39982433 39982740 -105606548 + AluJb SINE Alu 1 312 0 2336 48 42 0 chr10 39987636 39987925 -105601363 - AluY SINE Alu -10 301 1 628 253 26 0 chr10 39989336 39989490 -105599798 + MIR3 SINE MIR 48 205 -3 239 297 0 16 chr10 39990219 39990283 -105599005 + MIR SINE MIR 128 190 -72 234 240 13 13 chr10 39991962 39992037 -105597251 + (CGGGG)n Simple_repeat Simple_repeat 1 75 0 21 0 0 0 chr10 39992102 39992123 -105597165 + GC_rich Low_complexity Low_complexity 1 21 0 186 43 0 0 chr10 39993097 39993120 -105596168 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 564 266 101 0 chr10 39993125 39993343 -105595945 - Tigger3(Golem) DNA MER2_type 0 3029 2790 297 0 0 0 chr10 39993453 39993486 -105595802 + (TG)n Simple_repeat Simple_repeat 1 33 0 * 501 32 0 0 chr10 39993485 39993548 -105595740 + (GA)n Simple_repeat Simple_repeat 1 63 0 1022 116 0 0 chr10 39993550 39993688 -105595600 - AluSg/x SINE Alu -41 269 132 2039 103 3 33 chr10 39993688 39993988 -105595300 - AluSq SINE Alu -22 291 1 1259 129 5 0 chr10 39993997 39994183 -105595105 - AluJo SINE Alu -26 286 100 2091 113 31 0 chr10 39994207 39994498 -105594790 - AluSx SINE Alu -12 300 1 273 282 14 0 chr10 39994575 39994646 -105594642 + MIR SINE MIR 80 151 -111 353 371 47 33 chr10 39995100 39995313 -105593975 + L1ME3A LINE L1 5639 5854 -316 2184 110 0 7 chr10 39995370 39995679 -105593609 + AluSq SINE Alu 1 307 -6 405 78 13 39 chr10 39995914 39995991 -105593297 + (TTTC)n Simple_repeat Simple_repeat 2 76 0 2138 74 7 7 chr10 39996104 39996387 -105592901 - AluY SINE Alu -28 283 1 2233 88 0 31 chr10 39996464 39996784 -105592504 - AluY SINE Alu -1 310 1 2213 98 0 7 chr10 39996793 39997120 -105592168 - AluSg1 SINE Alu 0 309 1 405 132 0 29 chr10 39997246 39997337 -105591951 + AluSp/q SINE Alu 224 313 0 864 138 38 12 chr10 39997337 39997497 -105591791 - THE1C LTR MaLR -211 164 1 2154 105 10 3 chr10 39997526 39997832 -105591456 + AluSx SINE Alu 1 308 -4 381 276 2 0 chr10 39997943 39998049 -105591239 - MIR SINE MIR -63 145 71 1220 203 108 0 chr10 39998154 39998450 -105590838 + L1MB5 LINE L1 5811 6138 -36 2094 124 0 16 chr10 39998455 39998769 -105590519 + AluSx SINE Alu 1 309 -3 297 179 0 90 chr10 39998791 39998869 -105590419 - AluJ/FRAM SINE Alu -16 286 216 1642 178 21 0 chr10 39998941 39999222 -105590066 - AluJo SINE Alu -25 287 1 180 296 0 19 chr10 39999295 39999349 -105589939 + MER5A DNA MER1_type 38 90 -99 1831 166 14 0 chr10 39999375 39999670 -105589618 - AluJo SINE Alu -13 299 1 222 253 13 13 chr10 39999671 39999772 -105589516 + (TA)n Simple_repeat Simple_repeat 1 101 0 1250 251 41 88 chr10 39999814 39999863 -105589425 + MLT1F LTR MaLR 1 51 -491 2194 97 7 7 chr10 39999863 40000163 -105589125 - AluSg SINE Alu -10 300 1 1250 251 41 88 chr10 40000163 40000345 -105588943 + MLT1F LTR MaLR 51 240 -302 2093 88 10 36 chr10 40000345 40000651 -105588637 + AluSq SINE Alu 1 298 -15 261 0 0 0 chr10 40000651 40000680 -105588608 + (TA)n Simple_repeat Simple_repeat 2 30 0 558 0 0 0 chr10 40000679 40000741 -105588547 + (GA)n Simple_repeat Simple_repeat 2 63 0 1250 251 41 88 chr10 40000680 40001021 -105588267 + MLT1F LTR MaLR 238 490 -52 2308 76 0 0 chr10 40001074 40001365 -105587923 + AluSg SINE Alu 1 291 -19 203 341 22 0 chr10 40001366 40001457 -105587831 + L2 LINE L2 2776 2868 -446 936 104 7 32 chr10 40001568 40001722 -105587566 - AluSx SINE Alu -146 166 17 662 212 0 0 chr10 40001731 40001849 -105587439 + FAM SINE Alu 49 166 -19 603 220 71 54 chr10 40001862 40002030 -105587258 + L1M4 LINE L1 5474 5644 -530 1264 69 0 0 chr10 40002033 40002193 -105587095 + AluSq SINE Alu 145 304 -9 225 388 0 0 chr10 40002204 40002338 -105586950 + (TGGA)n Simple_repeat Simple_repeat 4 137 0 192 298 155 0 chr10 40002351 40002435 -105586853 + MIR SINE MIR 4 100 -162 26 0 0 0 chr10 40002656 40002682 -105586606 + AT_rich Low_complexity Low_complexity 1 26 0 1997 71 0 46 chr10 40002688 40002971 -105586317 + AluY SINE Alu 1 270 -41 349 92 0 0 chr10 40003071 40003137 -105586151 - Alu SINE Alu -250 51 1 779 198 44 6 chr10 40003137 40003319 -105585969 - L1MB5 LINE L1 -47 6127 5939 1105 53 0 0 chr10 40003507 40003638 -105585650 - AluSg SINE Alu -179 131 1 2387 99 0 0 chr10 40003689 40004002 -105585286 - AluSq SINE Alu 0 313 1 325 309 55 0 chr10 40004005 40004115 -105585173 - MIR SINE MIR -37 225 110 2191 93 10 3 chr10 40004253 40004564 -105584724 + AluSp SINE Alu 1 313 0 204 0 83 0 chr10 40005326 40005362 -105583926 + T-rich Low_complexity Low_complexity 2 40 0 2339 61 0 0 chr10 40005364 40005644 -105583644 - AluSg SINE Alu -30 280 1 1045 82 0 27 chr10 40005645 40005791 -105583497 - AluSq/x SINE Alu -170 142 1 26 0 0 0 chr10 40005802 40005828 -105583460 + AT_rich Low_complexity Low_complexity 1 26 0 2136 125 0 3 chr10 40005959 40006264 -105583024 + AluSx SINE Alu 1 304 -8 2310 96 0 0 chr10 40006264 40006565 -105582723 + AluSx SINE Alu 1 301 -11 317 189 57 104 chr10 40006565 40006615 -105582673 + L1MB5 LINE L1 6073 6117 -57 2155 126 0 0 chr10 40006615 40006917 -105582371 - AluSq SINE Alu -11 302 1 317 189 57 104 chr10 40006917 40006972 -105582316 + L1MB5 LINE L1 6117 6173 -1 299 197 47 55 chr10 40006987 40007109 -105582179 - MSR1 Satellite Satellite -1 120 1 437 152 22 0 chr10 40007839 40007931 -105581357 - MSR1 Satellite Satellite 0 111 18 268 260 0 40 chr10 40008321 40008421 -105580867 - MSR1 Satellite Satellite -14 97 2 728 49 3 12 chr10 40009123 40009378 -105579910 - MSR1 Satellite Satellite 0 252 1 240 241 96 12 chr10 40009734 40009817 -105579471 + MSR1 Satellite Satellite 14 103 -8 2143 96 6 16 chr10 40010319 40010633 -105578655 + AluSq SINE Alu 3 313 0 2187 116 0 3 chr10 40010654 40010965 -105578323 + AluSq SINE Alu 1 310 -3 1787 122 45 25 chr10 40010972 40011258 -105578030 + AluJo SINE Alu 1 292 -20 1800 121 0 16 chr10 40011428 40011685 -105577603 - AluSx SINE Alu -27 285 33 2039 127 0 3 chr10 40011694 40011986 -105577302 - AluSx SINE Alu -19 293 3 297 192 0 55 chr10 40012086 40012159 -105577129 - AluS SINE Alu -234 69 1 309 234 47 85 chr10 40012159 40012256 -105577032 - MER106A DNA MER1_type -8 228 129 1690 180 3 19 chr10 40012256 40012437 -105576851 - AluJb SINE Alu 0 312 137 2355 89 0 3 chr10 40012437 40012740 -105576548 - AluSq SINE Alu -10 303 2 1690 180 3 19 chr10 40012740 40012875 -105576413 - AluJb SINE Alu -175 137 1 309 234 47 85 chr10 40012875 40013012 -105576276 - MER106A DNA MER1_type -107 129 3 495 232 18 9 chr10 40013014 40013126 -105576162 - L2 LINE L2 -4 3309 3197 657 333 37 8 chr10 40013577 40013820 -105575468 + MIR SINE MIR 5 254 -8 742 229 131 6 chr10 40013954 40014137 -105575151 - MER63A DNA MER1_type -2 208 3 236 282 42 14 chr10 40014195 40014266 -105575022 + MIR SINE MIR 71 143 -65 2244 96 0 3 chr10 40014287 40014459 -105574829 - AluSg SINE Alu -8 302 130 2361 87 0 0 chr10 40014459 40014759 -105574529 - AluY SINE Alu -11 300 1 2244 96 0 3 chr10 40014759 40014889 -105574399 - AluSg SINE Alu -180 130 1 2161 108 0 0 chr10 40014889 40015205 -105574083 - AluSx SINE Alu 0 316 1 2037 140 0 0 chr10 40015917 40016209 -105573079 + AluSx SINE Alu 1 292 -20 754 109 0 0 chr10 40016212 40016313 -105572975 - AluJo/FLAM SINE Alu -203 109 9 261 0 0 0 chr10 40017676 40017705 -105571583 + (T)n Simple_repeat Simple_repeat 1 29 0 208 135 0 0 chr10 40017929 40017966 -105571322 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 2366 83 0 3 chr10 40018950 40019252 -105570036 + AluSx SINE Alu 1 301 -11 824 194 38 21 chr10 40019476 40019662 -105569626 - MER20 DNA MER1_type -1 218 30 1059 222 169 14 chr10 40019668 40020100 -105569188 + MLT1D LTR MaLR 6 504 -1 1906 164 18 0 chr10 40020477 40020818 -105568470 + MLT1A1 LTR MaLR 19 365 0 310 171 239 11 chr10 40021014 40021102 -105568186 - MER81 DNA DNA -3 111 4 355 179 16 41 chr10 40021360 40021483 -105567805 + C-rich Low_complexity Low_complexity 5 124 0 2113 127 0 13 chr10 40021886 40022200 -105567088 + AluSx SINE Alu 1 310 -2 1801 143 3 73 chr10 40022233 40022422 -105566866 - AluJb SINE Alu -6 306 148 369 0 0 0 chr10 40022422 40022463 -105566825 + (TG)n Simple_repeat Simple_repeat 2 42 0 1801 143 3 73 chr10 40022463 40022602 -105566686 - AluJb SINE Alu -164 148 1 2183 80 31 0 chr10 40022644 40022933 -105566355 - AluSg SINE Alu -12 298 1 401 250 108 0 chr10 40023173 40023293 -105565995 + MER117 DNA MER1_type 18 150 -47 502 293 43 0 chr10 40023375 40023539 -105565749 + MIR SINE MIR 31 201 -61 186 359 54 0 chr10 40025811 40025903 -105563385 + L2 LINE L2 3209 3305 -8 435 252 38 50 chr10 40026187 40026346 -105562942 - MIR3 SINE MIR -15 193 37 260 293 24 85 chr10 40026595 40026759 -105562529 - MIR3 SINE MIR -53 155 2 632 146 6 55 chr10 40027606 40027915 -105561373 + MSR1 Satellite Satellite 1 293 -2 485 287 7 7 chr10 40028727 40028870 -105560418 - MIR SINE MIR -65 197 55 235 244 326 0 chr10 40028976 40029062 -105560226 - L2 LINE L2 0 3272 3159 611 191 143 19 chr10 40029133 40029343 -105559945 + MLT1C LTR MaLR 126 361 -106 2166 128 0 6 chr10 40029343 40029656 -105559632 - AluSq SINE Alu -2 311 1 1097 81 0 0 chr10 40029656 40029792 -105559496 - AluSq/x SINE Alu -177 136 1 331 279 240 22 chr10 40029794 40029973 -105559315 + MIR SINE MIR 44 261 -1 225 229 71 29 chr10 40030445 40030515 -105558773 + MIR SINE MIR 117 189 -73 2129 125 0 0 chr10 40030527 40030839 -105558449 + AluSx SINE Alu 1 312 0 648 233 39 11 chr10 40030864 40031044 -105558244 + MER82 DNA MER2_type 1 185 -468 845 109 39 0 chr10 40031046 40031174 -105558114 - AluSg1 SINE Alu -15 297 165 699 70 0 0 chr10 40031174 40031260 -105558028 - AluSg1 SINE Alu -223 86 1 1813 216 48 18 chr10 40031260 40031714 -105557574 + MER82 DNA MER2_type 179 646 -7 1488 113 196 23 chr10 40031740 40032006 -105557282 + AluSx SINE Alu 1 312 0 412 273 117 73 chr10 40032042 40032095 -105557193 - MIR SINE MIR -37 225 176 2238 99 6 6 chr10 40032095 40032408 -105556880 + AluSq SINE Alu 1 313 0 412 273 117 73 chr10 40032408 40032559 -105556729 - MIR SINE MIR -86 176 12 314 284 11 0 chr10 40032691 40032779 -105556509 + MIR SINE MIR 33 121 -87 1949 120 27 0 chr10 40032842 40033141 -105556147 + AluSg SINE Alu 1 307 -3 1764 148 0 57 chr10 40033173 40033342 -105555946 - AluJo SINE Alu -10 302 158 2498 40 0 7 chr10 40033342 40033643 -105555645 - AluY SINE Alu -11 300 2 1764 148 0 57 chr10 40033643 40033791 -105555497 - AluJo SINE Alu -154 158 3 238 268 120 63 chr10 40034066 40034208 -105555080 - L2 LINE L2 -252 3061 2912 2080 112 0 3 chr10 40034237 40034524 -105554764 - AluSx SINE Alu -26 286 1 2006 141 0 3 chr10 40034786 40035098 -105554190 + AluJb SINE Alu 1 311 -1 2086 128 0 0 chr10 40035109 40035406 -105553882 + AluSx SINE Alu 2 298 -14 2102 124 0 0 chr10 40035408 40035707 -105553581 + AluSx SINE Alu 1 299 -13 25 0 0 0 chr10 40036341 40036366 -105552922 + AT_rich Low_complexity Low_complexity 1 25 0 2188 108 3 0 chr10 40036382 40036679 -105552609 - AluSg SINE Alu -12 298 1 261 0 0 0 chr10 40036679 40036708 -105552580 + (TTTA)n Simple_repeat Simple_repeat 3 31 0 1126 129 6 28 chr10 40036708 40036857 -105552431 - AluSg/x SINE Alu -30 282 136 1847 91 109 4 chr10 40036857 40037132 -105552156 - AluSx SINE Alu -8 304 1 1126 129 6 28 chr10 40037132 40037160 -105552128 - AluSg/x SINE Alu -176 136 109 276 29 0 0 chr10 40037161 40037196 -105552092 + U2 snRNA snRNA 1 35 -153 810 227 0 0 chr10 40037199 40037349 -105551939 - AluJb SINE Alu -27 285 136 2338 90 0 0 chr10 40037357 40037657 -105551631 - AluSx SINE Alu -12 300 1 593 258 14 24 chr10 40037662 40037871 -105551417 - L1MC5 LINE L1 -35 7926 7720 2209 103 7 3 chr10 40038149 40038459 -105550829 + AluSx SINE Alu 1 311 -1 1523 132 107 22 chr10 40038682 40038954 -105550334 - AluJb SINE Alu -17 295 1 355 126 20 25 chr10 40038983 40039083 -105550205 + FLAM SINE Alu 64 121 -12 249 247 82 0 chr10 40039422 40039507 -105549781 - MER20 DNA MER1_type -4 215 124 700 186 7 57 chr10 40039628 40039768 -105549520 - FLAM_C SINE Alu 0 133 1 309 314 76 0 chr10 40039771 40039905 -105549383 - MIR SINE MIR -62 146 51 1266 218 38 145 chr10 40040199 40040271 -105549017 - L1MB7 LINE L1 -9 6175 6097 1719 169 30 3 chr10 40040271 40040573 -105548715 + AluJb SINE Alu 1 310 -2 1266 218 38 145 chr10 40040573 40040691 -105548597 - L1MB7 LINE L1 -87 6097 5968 2398 81 10 0 chr10 40040691 40041001 -105548287 - AluSq SINE Alu 0 313 1 1266 218 38 145 chr10 40041001 40041466 -105547822 - L1MB7 LINE L1 -216 5968 5589 2086 103 16 22 chr10 40041471 40041782 -105547506 - AluSx SINE Alu -3 309 1 2004 133 24 0 chr10 40043301 40043595 -105545693 + AluSx SINE Alu 1 301 -11 2333 92 3 0 chr10 40043682 40043987 -105545301 - AluSp SINE Alu -7 306 1 1146 158 91 24 chr10 40044838 40044886 -105544402 - L1MB7 LINE L1 -19 6165 6118 387 258 89 48 chr10 40044886 40045091 -105544197 - L1MB1 LINE L1 -163 6026 5887 2044 106 3 3 chr10 40045091 40045399 -105543889 - AluSq SINE Alu 0 308 1 387 258 89 48 chr10 40045399 40045453 -105543835 - L1MB1 LINE L1 -302 5887 5837 1026 200 39 45 chr10 40045574 40045740 -105543548 - L1MB1 LINE L1 -864 5282 5117 2627 36 0 0 chr10 40045740 40046044 -105543244 - AluY SINE Alu -7 304 1 1026 200 39 45 chr10 40046044 40046207 -105543081 - L1MB1 LINE L1 -1029 5117 4955 192 97 0 0 chr10 40046990 40047021 -105542267 + (CCCCCA)n Simple_repeat Simple_repeat 4 34 0 646 107 9 5 chr10 40047169 40047832 -105541456 - MSR1 Satellite Satellite 0 665 1 678 109 18 3 chr10 40048478 40048875 -105540413 - MSR1 Satellite Satellite 0 402 1 303 179 17 86 chr10 40050450 40050567 -105538721 + GA-rich Low_complexity Low_complexity 2 110 0 221 247 45 56 chr10 40050539 40050717 -105538571 + (CAGAGA)n Simple_repeat Simple_repeat 3 178 0 * 274 264 6 66 chr10 40050665 40050832 -105538456 + GA-rich Low_complexity Low_complexity 6 162 0 1502 147 128 11 chr10 40051386 40051659 -105537629 + AluJo SINE Alu 1 305 -7 546 311 24 48 chr10 40051715 40051966 -105537322 - L2 LINE L2 -5 3308 3064 428 82 33 0 chr10 40051966 40052027 -105537261 - AluYb8 SINE Alu -174 144 82 2420 90 0 0 chr10 40052043 40052353 -105536935 - AluSg SINE Alu 0 310 1 238 215 92 0 chr10 40052360 40052425 -105536863 - MER94 DNA DNA -61 73 3 1800 164 3 7 chr10 40052425 40052735 -105536553 - AluJo SINE Alu -3 309 1 1993 184 106 2 chr10 40052761 40053196 -105536092 + MLT1D LTR MaLR 26 505 0 375 23 0 0 chr10 40053247 40053291 -105535997 + (CA)n Simple_repeat Simple_repeat 1 44 0 229 276 92 10 chr10 40053710 40053808 -105535480 - MIR SINE MIR -62 146 41 580 249 146 5 chr10 40055228 40055413 -105533875 + MIR SINE MIR 31 241 -21 787 222 17 78 chr10 40055439 40055469 -105533819 + MIR SINE MIR 20 50 -212 1769 152 10 29 chr10 40055469 40055779 -105533509 - AluSx SINE Alu -8 304 1 787 222 17 78 chr10 40055779 40055978 -105533310 + MIR SINE MIR 50 235 -27 2005 117 7 3 chr10 40056156 40056446 -105532842 - AluSx SINE Alu -21 291 1 827 185 65 10 chr10 40057045 40057245 -105532043 - L2 LINE L2 -247 3066 2856 252 317 0 0 chr10 40057762 40057822 -105531466 - L2 LINE L2 -1 3312 3253 21 0 0 0 chr10 40057923 40057944 -105531344 + AT_rich Low_complexity Low_complexity 1 21 0 1545 221 128 7 chr10 40058040 40058276 -105531012 - L1MB5 LINE L1 -76 6098 5892 1562 158 37 71 chr10 40058276 40058443 -105530845 - AluSx SINE Alu 0 312 160 2225 113 0 0 chr10 40058443 40058743 -105530545 - AluSg SINE Alu -10 300 1 1562 158 37 71 chr10 40058743 40058898 -105530390 - AluSx SINE Alu -152 160 1 1545 221 128 7 chr10 40058898 40059123 -105530165 - L1MB5 LINE L1 -282 5892 5581 246 130 0 22 chr10 40059128 40059174 -105530114 - MER58A DNA MER1_type -33 74 30 2237 158 21 13 chr10 40059368 40059755 -105529533 - MLT1B LTR MaLR 0 390 1 25 0 0 0 chr10 40160595 40160620 -105428668 + AT_rich Low_complexity Low_complexity 1 25 0 436 307 132 11 chr10 40160909 40161126 -105428162 + MIR SINE MIR 3 243 -19 317 361 13 13 chr10 40161713 40161868 -105427420 - MIR SINE MIR -10 252 98 183 286 41 88 chr10 40162546 40162693 -105426595 + L2 LINE L2 3101 3240 -73 182 371 11 0 chr10 40162873 40162962 -105426326 + MIR SINE MIR 53 142 -120 2361 95 10 0 chr10 40164002 40164306 -105424982 + AluSq SINE Alu 1 307 -6 26 30 0 0 chr10 40164326 40164359 -105424929 + AT_rich Low_complexity Low_complexity 1 33 0 2251 93 0 0 chr10 40164441 40164731 -105424557 - AluSg1 SINE Alu -19 290 1 351 222 0 0 chr10 40164766 40164838 -105424450 + L2 LINE L2 3201 3272 0 444 324 14 0 chr10 40165598 40165740 -105423548 - MIR SINE MIR -10 252 109 182 289 105 13 chr10 40165934 40166010 -105423278 + L2 LINE L2 3182 3264 -49 184 258 124 41 chr10 40166291 40166388 -105422900 + MIR SINE MIR 98 202 -60 781 207 75 46 chr10 40166515 40166689 -105422599 + MER20 DNA MER1_type 16 194 -25 551 165 0 0 chr10 40167255 40167346 -105421942 - MSTC LTR MaLR -337 91 1 309 262 123 57 chr10 40167875 40168033 -105421255 + MIR SINE MIR 21 200 -62 216 220 44 0 chr10 40168034 40168125 -105421163 + (CATATA)n Simple_repeat Simple_repeat 2 96 0 415 294 77 33 chr10 40168956 40169189 -105420099 - MIR SINE MIR 0 262 25 2487 84 0 0 chr10 40169346 40169657 -105419631 + AluY SINE Alu 1 311 0 2021 106 29 0 chr10 40169722 40169995 -105419293 - AluSc SINE Alu -28 281 1 213 322 104 17 chr10 40170053 40170168 -105419120 + L3 LINE CR1 1167 1291 -286 211 257 189 0 chr10 40170242 40170316 -105418972 - MIR SINE MIR -68 140 52 356 393 12 0 chr10 40170348 40170511 -105418777 + L3 LINE CR1 1390 1554 -23 6894 59 27 8 chr10 40171048 40171928 -105417360 - MER11D LTR ERVK 0 897 1 23 0 0 0 chr10 40171949 40171972 -105417316 + AT_rich Low_complexity Low_complexity 1 23 0 250 318 19 19 chr10 40171975 40172129 -105417159 - L1ME2 LINE L1 -238 5926 5773 206 183 21 21 chr10 40172368 40172461 -105416827 + (TA)n Simple_repeat Simple_repeat 1 93 0 2016 113 33 3 chr10 40172604 40172904 -105416384 - AluSc SINE Alu 0 309 1 241 227 0 0 chr10 40173759 40173803 -105415485 + polypyrimidine Low_complexity Low_complexity 3 46 0 950 296 94 27 chr10 40174006 40174408 -105414880 + LTR16A LTR ERVL 16 444 -6 492 298 77 34 chr10 40175348 40175583 -105413705 + MIR SINE MIR 8 252 -10 2465 40 0 17 chr10 40175772 40176073 -105413215 + AluY SINE Alu 1 296 -15 321 345 7 22 chr10 40176126 40176265 -105413023 + MIR3 SINE MIR 3 139 -69 216 326 81 91 chr10 40176320 40176541 -105412747 - L2 LINE L2 -16 3256 3038 2007 123 10 3 chr10 40177135 40177427 -105411861 + AluSg SINE Alu 1 294 -16 698 339 5 5 chr10 40177458 40177679 -105411609 - MIR SINE MIR -19 243 23 245 386 85 11 chr10 40177684 40177873 -105411415 + L3 LINE CR1 1374 1576 -1 200 385 31 19 chr10 40178118 40178279 -105411009 + MIR SINE MIR 1 163 -99 1637 174 38 40 chr10 40179037 40179410 -105409878 - MLT1A2 LTR MaLR -2 372 1 324 352 64 30 chr10 40179759 40179992 -105409296 + MIR SINE MIR 7 247 -15 2106 116 0 11 chr10 40180059 40180343 -105408945 - AluSq SINE Alu -32 281 1 435 335 55 62 chr10 40180429 40180829 -105408459 - MLT1J LTR MaLR -5 506 110 355 314 14 43 chr10 40180943 40181083 -105408205 - L2 LINE L2 0 3272 3137 958 236 69 5 chr10 40181544 40181747 -105407541 - MER58A DNA MER1_type -8 216 1 194 333 103 0 chr10 40182954 40183041 -105406247 - MIR SINE MIR -73 135 40 34 42 0 0 chr10 40183178 40183226 -105406062 + AT_rich Low_complexity Low_complexity 1 48 0 228 331 169 0 chr10 40183283 40183437 -105405851 - MIR SINE MIR -72 190 11 336 359 36 48 chr10 40184156 40184404 -105404884 + MIR SINE MIR 18 262 0 226 301 41 57 chr10 40184437 40184560 -105404728 + L1ME4a LINE L1 5534 5654 -2154 407 349 20 48 chr10 40184835 40185084 -105404204 + L2 LINE L2 3027 3268 -4 385 184 35 57 chr10 40185369 40185510 -105403778 + L1ME4a LINE L1 5962 6099 -22 190 294 29 15 chr10 40186033 40186101 -105403187 + MIR SINE MIR 81 149 -113 202 391 0 0 chr10 40186290 40186354 -105402934 + L2 LINE L2 3201 3264 -8 293 322 52 35 chr10 40186757 40186872 -105402416 + L2 LINE L2 3149 3265 -7 624 183 14 81 chr10 40187183 40187402 -105401886 - MER106A DNA MER1_type -37 199 1 410 305 146 18 chr10 40187473 40187699 -105401589 + MIR SINE MIR 1 255 -7 198 197 280 0 chr10 40187913 40188012 -105401276 + MIR SINE MIR 64 197 -65 312 303 139 0 chr10 40188432 40188554 -105400734 + MIR SINE MIR 83 221 -41 222 37 0 0 chr10 40188641 40188668 -105400620 + (GA)n Simple_repeat Simple_repeat 1 27 0 267 337 0 0 chr10 40189070 40189168 -105400120 + (TGGA)n Simple_repeat Simple_repeat 1 98 0 271 293 163 0 chr10 40189362 40189485 -105399803 - MIR3 SINE MIR -27 181 39 229 345 12 0 chr10 40190712 40190796 -105398492 - MIR SINE MIR -21 241 157 438 286 138 48 chr10 40190937 40191206 -105398082 - MER102b DNA MER1_type -1 340 48 24 32 0 0 chr10 40191643 40191674 -105397614 + AT_rich Low_complexity Low_complexity 1 31 0 6359 44 5 0 chr10 40192289 40193210 -105396078 - L1PA4 LINE L1 -623 5531 4606 5305 37 2 6 chr10 40193210 40193837 -105395451 + L1PA4 LINE L1 5509 6150 -5 369 0 0 0 chr10 40193893 40193934 -105395354 + (T)n Simple_repeat Simple_repeat 1 41 0 1280 177 36 0 chr10 40194760 40195009 -105394279 - L1 LINE L1 -788 5358 5101 2689 197 21 55 chr10 40195016 40195169 -105394119 + L1MA7 LINE L1 5638 5795 -496 2185 125 0 6 chr10 40195169 40195480 -105393808 + AluSg SINE Alu 1 309 -1 2689 197 21 55 chr10 40195480 40196001 -105393287 + L1MA7 LINE L1 5795 6289 -2 705 246 170 18 chr10 40196023 40196247 -105393041 - MIR SINE MIR 0 262 5 274 272 102 85 chr10 40196855 40197071 -105392217 - MIR SINE MIR 0 262 55 240 265 26 43 chr10 40197500 40197617 -105391671 - MIR SINE MIR -44 218 104 270 330 104 17 chr10 40197851 40197965 -105391323 + MIR3 SINE MIR 37 160 -48 225 139 0 0 chr10 40197965 40198001 -105391287 + MER5B DNA MER1_type 3 38 -140 2099 175 29 3 chr10 40198054 40198436 -105390852 + L1PA15 LINE L1 5773 6164 -1 333 330 73 6 chr10 40198474 40198653 -105390635 + L1MC5 LINE L1 7711 7901 -60 314 311 13 93 chr10 40198684 40198835 -105390453 - MER5B DNA MER1_type -30 148 10 1669 167 51 0 chr10 40199362 40199655 -105389633 - AluSx SINE Alu -4 308 1 339 313 44 38 chr10 40199672 40199832 -105389456 - MIR SINE MIR -85 177 17 306 277 18 18 chr10 40199864 40199976 -105389312 + CT-rich Low_complexity Low_complexity 4 115 0 277 233 33 0 chr10 40200791 40200851 -105388437 - L1ME3A LINE L1 -58 6112 6051 1933 107 3 76 chr10 40200853 40201170 -105388118 - AluSg1 SINE Alu -15 294 1 33 25 0 0 chr10 40201375 40201415 -105387873 + AT_rich Low_complexity Low_complexity 1 40 0 3064 38 3 0 chr10 40201415 40201788 -105387500 - L1PA5 LINE L1 -11 6143 5770 37070 45 1 1 chr10 40201830 40207986 -105381302 - L1PA3 LINE L1 -3 6152 1 * 38139 72 6 1 chr10 40207985 40213729 -105375559 - L1PA5 LINE L1 -377 5778 1 238 392 10 0 chr10 40213766 40213863 -105375425 + L2 LINE L2 3157 3254 -18 350 393 64 45 chr10 40213902 40214276 -105375012 - L2 LINE L2 0 3272 2892 269 326 77 44 chr10 40214347 40214528 -105374760 - L2 LINE L2 -492 2822 2636 259 320 127 39 chr10 40215130 40215311 -105373977 + MIR SINE MIR 46 242 -20 365 270 109 7 chr10 40215321 40215458 -105373830 - MIR SINE MIR -63 199 49 241 230 0 23 chr10 40215654 40215741 -105373547 + GA-rich Low_complexity Low_complexity 3 87 0 209 179 0 0 chr10 40215987 40216026 -105373262 + (CA)n Simple_repeat Simple_repeat 2 40 0 430 321 106 13 chr10 40216751 40216988 -105372300 + MIR SINE MIR 3 261 -1 356 263 40 0 chr10 40217431 40217530 -105371758 - MIR SINE MIR -70 192 90 1146 186 14 23 chr10 40217532 40217752 -105371536 + AluJo SINE Alu 5 222 -90 659 156 17 28 chr10 40217766 40217945 -105371343 + GA-rich Low_complexity Low_complexity 4 180 0 192 77 0 0 chr10 40217955 40217981 -105371307 + (GGGA)n Simple_repeat Simple_repeat 3 28 0 32 26 0 0 chr10 40218541 40218580 -105370708 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr10 40218716 40218738 -105370550 + AT_rich Low_complexity Low_complexity 1 22 0 222 209 0 0 chr10 40218842 40218885 -105370403 + (TATG)n Simple_repeat Simple_repeat 2 44 0 422 355 16 67 chr10 40218888 40219159 -105370129 + MIR SINE MIR 5 261 -1 193 317 42 33 chr10 40220098 40220218 -105369070 + L2 LINE L2 2176 2296 -1018 322 310 35 9 chr10 40220225 40220341 -105368947 + MIR SINE MIR 114 232 -30 296 217 0 0 chr10 40220697 40220760 -105368528 + MIR SINE MIR 58 119 -98 2391 97 3 0 chr10 40221125 40221433 -105367855 + AluSc SINE Alu 1 309 0 391 316 153 58 chr10 40222156 40222482 -105366806 - L2 LINE L2 0 3272 2916 526 289 117 8 chr10 40224218 40224457 -105364831 + MER46C DNA MER2_type 8 272 -66 219 333 0 33 chr10 40224672 40224762 -105364526 - L2 LINE L2 -3 3310 3224 273 336 26 9 chr10 40224867 40224983 -105364305 - MIR SINE MIR -144 118 1 265 314 38 9 chr10 40225157 40225262 -105364026 + MIR SINE MIR 7 114 -148 1969 109 0 8 chr10 40225276 40225532 -105363756 - AluSg SINE Alu -14 296 43 187 355 73 0 chr10 40226357 40226467 -105362821 + L2 LINE L2 2612 2729 -585 2292 103 0 0 chr10 40226505 40226796 -105362492 + AluSg SINE Alu 1 291 -19 1105 268 14 83 chr10 40227094 40227530 -105361758 - MLT1H LTR MaLR -133 416 11 198 300 62 0 chr10 40227812 40227892 -105361396 - MIR SINE MIR -97 165 81 7744 16 3 0 chr10 40229194 40230604 -105358684 + L1PA2 LINE L1 4740 6152 -3 540 332 27 18 chr10 40231213 40231436 -105357852 + MIR SINE MIR 37 261 -1 2269 44 40 0 chr10 40231527 40231979 -105357309 - AluY SINE Alu 0 463 1 201 300 86 0 chr10 40232536 40232606 -105356682 + L2 LINE L2 3213 3288 -25 1921 94 12 8 chr10 40233395 40233649 -105355639 + AluSg SINE Alu 1 255 -55 405 164 0 0 chr10 40233649 40233722 -105355566 + (TA)n Simple_repeat Simple_repeat 1 73 0 4344 186 21 19 chr10 40233982 40235411 -105353877 - L1PB4 LINE L1 -2 6154 4729 482 201 0 15 chr10 40235403 40235537 -105353751 - L1PB4 LINE L1 -2660 3486 3355 * 570 321 39 25 chr10 40235630 40236038 -105353250 - L1ME3A LINE L1 -274 5896 5483 201 317 146 0 chr10 40237039 40237121 -105352167 + MIR SINE MIR 163 256 -6 236 340 50 0 chr10 40237288 40237388 -105351900 - MIR SINE MIR -40 222 118 432 322 33 17 chr10 40238390 40238579 -105350709 - MIR SINE MIR -27 235 37 427 303 141 21 chr10 40238789 40239023 -105350265 + MIR SINE MIR 1 262 0 518 112 0 0 chr10 40239023 40239112 -105350176 + pTR5 LTR ERV1 744 832 -1606 2968 149 102 22 chr10 40239116 40239894 -105349394 + pTR5 LTR ERV1 119 274 -440 318 250 0 0 chr10 40239894 40239978 -105349310 + LTR30 LTR ERV1 541 624 -98 819 71 100 7 chr10 40239978 40240118 -105349170 + pTR5 LTR ERV1 49 201 -2237 412 307 28 40 chr10 40240118 40240294 -105348994 + MIR SINE MIR 79 252 -10 307 225 0 0 chr10 40240588 40240659 -105348629 + MLT2B3 LTR ERVL 1 71 -483 1964 194 45 56 chr10 40240757 40241222 -105348066 + MLT2B3 LTR ERVL 75 534 -20 264 77 0 0 chr10 40242063 40242102 -105347186 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 359 245 90 75 chr10 40242188 40242388 -105346900 - LTR33 LTR ERVL -258 263 61 674 292 51 97 chr10 40242782 40243533 -105345755 - L2 LINE L2 -25 3288 2559 215 287 69 23 chr10 40243605 40243692 -105345596 + MIR SINE MIR 159 249 -13 180 0 0 0 chr10 40245879 40245899 -105343389 + (T)n Simple_repeat Simple_repeat 1 20 0 233 330 71 9 chr10 40246006 40246118 -105343170 + MIR SINE MIR 2 120 -142 1954 119 3 60 chr10 40246158 40246477 -105342811 - AluSx SINE Alu -11 301 1 265 382 83 0 chr10 40246477 40246621 -105342667 + MIR SINE MIR 107 262 0 2248 105 0 0 chr10 40246669 40246963 -105342325 + AluSc SINE Alu 1 294 -15 948 222 42 14 chr10 40247053 40247337 -105341951 - L1MD1 LINE L1 -6 6236 5945 2157 68 61 7 chr10 40247376 40247671 -105341617 + AluY SINE Alu 1 311 0 6051 32 0 0 chr10 40247671 40248419 -105340869 - L1PA2 LINE L1 -1699 4447 3700 7818 18 0 0 chr10 40248419 40250113 -105339175 + L1PA2 LINE L1 4465 6155 0 3102 234 90 78 chr10 40250127 40251361 -105337927 - L1M4 LINE L1 -1242 4904 3686 7123 48 1 1 chr10 40251361 40252942 -105336346 - L1PA6 LINE L1 -5 6149 4570 2187 117 0 0 chr10 40252942 40253232 -105336056 - AluSg SINE Alu -11 299 10 3102 234 90 78 chr10 40253232 40253812 -105335476 - L1M4 LINE L1 -2459 3687 3067 191 314 113 32 chr10 40254230 40254354 -105334934 - MIR SINE MIR -59 203 70 3905 183 19 37 chr10 40255087 40255216 -105334072 + L1MB3 LINE L1 5274 5404 -779 2606 74 14 0 chr10 40255216 40255566 -105333722 + THE1A LTR MaLR 1 355 0 11473 102 6 8 chr10 40255566 40257147 -105332141 + THE1A-int LTR MaLR 1 1579 -1 2597 97 6 0 chr10 40257148 40257499 -105331789 + THE1A LTR MaLR 1 353 -2 3905 183 19 37 chr10 40257499 40258285 -105331003 + L1MB3 LINE L1 5402 6176 -7 550 292 74 10 chr10 40258529 40258731 -105330557 - MIR SINE MIR -16 246 32 274 268 70 0 chr10 40258903 40258974 -105330314 + L2 LINE L2 3238 3313 0 237 240 140 0 chr10 40260380 40260480 -105328808 + L1ME4a LINE L1 5936 6049 -72 556 305 51 58 chr10 40260782 40261074 -105328214 - L2 LINE L2 -2 3311 3022 377 257 59 6 chr10 40261093 40261253 -105328035 - L1MA10 LINE L1 -2 6332 6005 813 229 252 14 chr10 40261315 40261739 -105327549 - L1M4 LINE L1 -1211 4935 4411 2650 94 3 0 chr10 40261942 40262292 -105326996 - THE1A LTR MaLR 0 355 5 3793 102 0 11 chr10 40262567 40263109 -105326179 - L1PB1 LINE L1 -1 6150 5615 2370 149 37 1 chr10 40263116 40263843 -105325445 + L1PB1 LINE L1 4852 5597 -554 2209 287 258 14 chr10 40263843 40265174 -105324114 - L2 LINE L2 -281 3032 1375 457 314 159 45 chr10 40265362 40266141 -105323147 - L2 LINE L2 -191 3081 2220 211 331 41 16 chr10 40266790 40266911 -105322377 - MIR SINE MIR -32 230 107 205 289 0 24 chr10 40267413 40267496 -105321792 + MIR SINE MIR 155 235 -27 357 109 0 0 chr10 40267606 40267661 -105321627 + (TG)n Simple_repeat Simple_repeat 2 56 0 188 338 26 0 chr10 40268147 40268224 -105321064 - L2 LINE L2 -528 2786 2708 180 307 50 50 chr10 40268531 40268632 -105320656 - MIR SINE MIR 0 262 162 * 779 297 60 87 chr10 40268598 40269207 -105320081 + L2 LINE L2 2715 3308 -5 213 391 51 7 chr10 40269215 40269353 -105319935 - MIR SINE MIR -75 187 44 210 207 52 0 chr10 40269644 40269702 -105319586 + MIR SINE MIR 100 160 -102 932 226 26 52 chr10 40269803 40269843 -105319445 - MER58A DNA MER1_type -2196 224 184 2227 114 0 0 chr10 40269843 40270151 -105319137 + AluSg SINE Alu 1 308 -2 932 226 26 52 chr10 40270151 40270340 -105318948 - MER58A DNA MER1_type -2236 184 1 204 309 128 0 chr10 40271020 40271114 -105318174 + L2 LINE L2 2905 3010 -262 1632 193 28 43 chr10 40271209 40271603 -105317685 + MER89 LTR ERV1 172 559 0 22 35 0 0 chr10 40272454 40272483 -105316805 + AT_rich Low_complexity Low_complexity 1 29 0 353 366 84 0 chr10 40272485 40272687 -105316601 + MIR SINE MIR 2 220 -42 188 242 15 61 chr10 40273328 40273394 -105315894 + L2 LINE L2 3167 3229 -84 726 315 99 41 chr10 40273656 40274170 -105315118 - L2 LINE L2 -339 2975 2432 209 350 41 0 chr10 40274180 40274277 -105315011 + L2 LINE L2 2686 2786 -528 381 43 0 0 chr10 40274762 40274809 -105314479 + (CA)n Simple_repeat Simple_repeat 2 48 0 205 289 0 24 chr10 40274913 40274996 -105314292 - MIR SINE MIR -27 235 155 211 331 41 16 chr10 40275498 40275619 -105313669 + MIR SINE MIR 107 230 -32 401 311 173 38 chr10 40276268 40276921 -105312367 + L2 LINE L2 2220 2960 -354 1154 195 87 30 chr10 40276933 40277056 -105312232 - L1MEc LINE L1 -4007 2389 2274 1900 122 45 3 chr10 40277056 40277344 -105311944 - AluSg SINE Alu -10 300 1 1154 195 87 30 chr10 40277344 40277589 -105311699 - L1MEc LINE L1 -4122 2274 2000 336 331 78 24 chr10 40278235 40278401 -105310887 - MIR SINE MIR -26 236 62 2078 120 0 3 chr10 40278415 40278742 -105310546 - AluY SINE Alu 0 311 1 32 0 0 0 chr10 40278804 40278836 -105310452 + AT_rich Low_complexity Low_complexity 1 32 0 2096 95 7 7 chr10 40279769 40280063 -105309225 - AluY SINE Alu -15 296 3 1968 181 59 17 chr10 40280846 40281255 -105308033 - MSTB LTR MaLR 0 426 1 23 0 0 0 chr10 40281378 40281401 -105307887 + AT_rich Low_complexity Low_complexity 1 23 0 34 24 0 0 chr10 40281469 40281510 -105307778 + AT_rich Low_complexity Low_complexity 1 41 0 264 30 0 0 chr10 40281510 40281543 -105307745 + (TG)n Simple_repeat Simple_repeat 2 34 0 25 65 0 0 chr10 40282662 40282708 -105306580 + AT_rich Low_complexity Low_complexity 1 46 0 2050 132 0 0 chr10 40282792 40283079 -105306209 + AluSx SINE Alu 1 287 -25 1633 179 14 10 chr10 40283291 40283588 -105305700 + AluJo SINE Alu 3 300 -12 1149 145 0 0 chr10 40283630 40283796 -105305492 + AluSg/x SINE Alu 129 294 -18 2292 111 0 0 chr10 40283967 40284264 -105305024 - AluSc SINE Alu -10 299 3 314 251 105 59 chr10 40284401 40284526 -105304762 - MER46C DNA MER2_type -45 293 175 1819 146 32 4 chr10 40284526 40284807 -105304481 + AluSq SINE Alu 1 289 -24 314 251 105 59 chr10 40284807 40284915 -105304373 - MER46C DNA MER2_type -163 175 1 1783 128 3 113 chr10 40285032 40285376 -105303912 - AluSp SINE Alu -7 306 1 345 318 54 22 chr10 40285401 40285662 -105303626 - L1MC/D LINE L1 -349 5772 5514 1789 127 36 29 chr10 40286188 40286495 -105302793 - AluSx SINE Alu -3 309 1 860 78 14 42 chr10 40286499 40286641 -105302647 - AluSq/x SINE Alu -175 138 1 2155 108 10 22 chr10 40286673 40286987 -105302301 + AluSp SINE Alu 1 310 -3 2284 96 0 13 chr10 40286989 40287303 -105301985 + AluY SINE Alu 1 310 -1 2237 84 7 17 chr10 40287311 40287607 -105301681 + AluSg SINE Alu 5 297 -13 1130 148 14 67 chr10 40287930 40288153 -105301135 - AluSp SINE Alu -81 232 22 489 161 0 11 chr10 40288166 40288253 -105301035 + AluSp SINE Alu 54 139 -174 2258 109 3 0 chr10 40289842 40290153 -105299135 + AluSx SINE Alu 1 312 0 447 266 27 49 chr10 40292261 40292445 -105296843 - MER104 DNA Tc2 0 180 1 605 274 100 69 chr10 40292537 40292790 -105296498 - MIR SINE MIR -1 261 6 40 0 0 0 chr10 40293207 40293247 -105296041 + AT_rich Low_complexity Low_complexity 1 40 0 290 321 19 0 chr10 40293889 40293995 -105295293 + MER102b DNA MER1_type 233 340 -1 24 67 0 0 chr10 40294048 40294093 -105295195 + AT_rich Low_complexity Low_complexity 1 45 0 241 320 80 13 chr10 40294997 40295072 -105294216 - L2 LINE L2 -50 3222 3143 2031 145 3 10 chr10 40295793 40296097 -105293191 + AluSx SINE Alu 2 303 -9 208 176 0 20 chr10 40296223 40296274 -105293014 + T-rich Low_complexity Low_complexity 3 52 0 292 342 85 20 chr10 40296358 40296557 -105292731 + MIR SINE MIR 20 231 -31 642 181 0 0 chr10 40298313 40298418 -105290870 + U6 snRNA snRNA 1 105 -2 30 45 0 0 chr10 40298870 40298914 -105290374 + AT_rich Low_complexity Low_complexity 1 44 0 750 167 0 0 chr10 40299042 40299168 -105290120 - FLAM_C SINE Alu -17 126 1 215 326 103 11 chr10 40299242 40299398 -105289890 - MIR SINE MIR -41 221 58 300 70 0 0 chr10 40299871 40299914 -105289374 + (TG)n Simple_repeat Simple_repeat 2 44 0 198 0 0 0 chr10 40299913 40299935 -105289353 + (TA)n Simple_repeat Simple_repeat 1 22 0 * 36 40 0 0 chr10 40300202 40300252 -105289036 + AT_rich Low_complexity Low_complexity 1 50 0 15315 61 3 5 chr10 40300324 40302280 -105287008 + L1P LINE L1 6 1957 -4189 1998 219 32 7 chr10 40302337 40302779 -105286509 - LTR22 LTR ERVK -56 453 1 216 0 0 0 chr10 40302804 40302828 -105286460 + (ATTG)n Simple_repeat Simple_repeat 1 24 0 261 211 0 18 chr10 40302828 40302880 -105286408 - FLAM_A SINE Alu -17 116 66 1663 209 55 60 chr10 40302931 40303367 -105285921 - Tigger2a DNA MER2_type 0 434 1 1809 155 19 23 chr10 40304375 40304684 -105284604 + AluSx SINE Alu 3 310 -2 1914 145 16 16 chr10 40305656 40305966 -105283322 - AluSg SINE Alu 0 310 1 546 294 98 20 chr10 40305970 40306225 -105283063 - MLT1L LTR MaLR -221 394 120 939 265 5 5 chr10 40306405 40306458 -105282830 - MER58A DNA MER1_type -2196 224 172 2110 139 0 0 chr10 40306458 40306753 -105282535 + AluSg SINE Alu 2 296 -14 939 265 5 5 chr10 40306753 40306922 -105282366 - MER58A DNA MER1_type -2247 173 2 29 90 0 0 chr10 40307826 40307904 -105281384 + AT_rich Low_complexity Low_complexity 1 78 0 1996 104 3 77 chr10 40308277 40308604 -105280684 + AluSx SINE Alu 1 303 -9 3002 119 6 53 chr10 40309566 40310079 -105279209 - LTR22B LTR ERVK -3 489 1 259 258 16 0 chr10 40311224 40311286 -105278002 - MER5A DNA MER1_type -118 71 9 30 0 0 0 chr10 40311544 40311574 -105277714 + AT_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chr10 40313100 40313126 -105276162 + AT_rich Low_complexity Low_complexity 1 26 0 252 158 0 0 chr10 40313397 40313454 -105275834 + (TG)n Simple_repeat Simple_repeat 2 58 0 420 216 302 0 chr10 40317360 40317499 -105271789 - MER5A DNA MER1_type 0 189 9 213 94 0 0 chr10 40317995 40318027 -105271261 + (TATG)n Simple_repeat Simple_repeat 4 35 0 2171 99 7 0 chr10 40318884 40319178 -105270110 + AluY SINE Alu 1 296 -15 22 35 0 0 chr10 40319445 40319474 -105269814 + AT_rich Low_complexity Low_complexity 1 29 0 1599 168 0 25 chr10 40320477 40320757 -105268531 - AluSx SINE Alu -39 273 1 1544 196 20 7 chr10 40322319 40322625 -105266663 + AluSx SINE Alu 1 310 -2 2038 80 53 17 chr10 40322783 40323083 -105266205 - AluY SINE Alu 0 311 1 233 319 32 0 chr10 40323415 40323509 -105265779 - Charlie1 DNA MER1_type -2563 198 102 22 0 0 0 chr10 40323693 40323715 -105265573 + AT_rich Low_complexity Low_complexity 1 22 0 1102 105 0 7 chr10 40324058 40324211 -105265077 + AluY SINE Alu 3 154 -157 306 207 0 0 chr10 40324211 40324269 -105265019 - MER5A DNA MER1_type -123 66 9 29 0 0 0 chr10 40324538 40324567 -105264721 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr10 40325066 40325087 -105264201 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 40326098 40326126 -105263162 + AT_rich Low_complexity Low_complexity 1 28 0 285 155 0 0 chr10 40326399 40326457 -105262831 + (TG)n Simple_repeat Simple_repeat 1 58 0 185 338 26 0 chr10 40327431 40327508 -105261780 - L2 LINE L2 -528 2786 2708 186 307 50 50 chr10 40327814 40327915 -105261373 - MIR SINE MIR 0 262 162 * 767 297 60 87 chr10 40327881 40328490 -105260798 + L2 LINE L2 2715 3308 -5 215 391 51 7 chr10 40328498 40328636 -105260652 - MIR SINE MIR -75 187 44 206 207 52 0 chr10 40328927 40328985 -105260303 + MIR SINE MIR 100 160 -102 927 226 26 52 chr10 40329086 40329126 -105260162 - MER58A DNA MER1_type -2196 224 184 2209 114 0 0 chr10 40329126 40329434 -105259854 + AluSg SINE Alu 1 308 -2 927 226 26 52 chr10 40329434 40329623 -105259665 - MER58A DNA MER1_type -2236 184 1 202 309 128 0 chr10 40330303 40330397 -105258891 + L2 LINE L2 2905 3010 -262 1639 190 28 43 chr10 40330492 40330886 -105258402 + MER89 LTR ERV1 172 559 0 22 35 0 0 chr10 40331737 40331766 -105257522 + AT_rich Low_complexity Low_complexity 1 29 0 351 366 84 0 chr10 40331768 40331970 -105257318 + MIR SINE MIR 2 220 -42 186 242 15 61 chr10 40332611 40332677 -105256611 + L2 LINE L2 3167 3229 -84 721 315 99 41 chr10 40332939 40333453 -105255835 - L2 LINE L2 -339 2975 2432 207 350 41 0 chr10 40333463 40333560 -105255728 + L2 LINE L2 2686 2786 -528 324 102 0 0 chr10 40334045 40334094 -105255194 + (CA)n Simple_repeat Simple_repeat 2 50 0 209 289 0 24 chr10 40334202 40334285 -105255003 - MIR SINE MIR -27 235 155 216 331 41 16 chr10 40334787 40334908 -105254380 + MIR SINE MIR 107 230 -32 478 320 148 43 chr10 40335557 40336506 -105252782 + L2 LINE L2 2220 3306 -7 2194 287 258 14 chr10 40336520 40337851 -105251437 + L2 LINE L2 1375 3032 -281 2376 149 41 1 chr10 40337851 40338581 -105250707 - L1PB1 LINE L1 -554 5597 4845 3789 102 0 11 chr10 40338585 40339127 -105250161 + L1PB1 LINE L1 5615 6150 -1 2632 94 3 0 chr10 40339402 40339752 -105249536 + THE1A LTR MaLR 5 355 0 640 260 137 13 chr10 40339990 40340378 -105248910 + L1M4 LINE L1 4454 4935 -1211 385 257 59 6 chr10 40340440 40340600 -105248688 + L1MA10 LINE L1 6005 6332 -2 537 312 51 58 chr10 40340619 40340911 -105248377 + L2 LINE L2 3022 3311 -2 249 240 140 0 chr10 40341210 40341310 -105247978 - L1ME4a LINE L1 -72 6049 5936 277 268 70 0 chr10 40342716 40342787 -105246501 - L2 LINE L2 0 3313 3238 528 302 74 10 chr10 40342959 40343161 -105246127 + MIR SINE MIR 32 246 -16 4364 182 23 39 chr10 40343404 40344190 -105245098 - L1MB3 LINE L1 -7 6176 5379 2569 97 6 0 chr10 40344190 40344541 -105244747 - THE1A LTR MaLR -2 353 1 11290 102 6 8 chr10 40344541 40346123 -105243165 - THE1A-int LTR MaLR 0 1580 1 2566 74 14 0 chr10 40346123 40346473 -105242815 - THE1A LTR MaLR 0 355 1 4364 182 23 39 chr10 40346473 40346601 -105242687 - L1MB3 LINE L1 -801 5382 5275 210 314 113 32 chr10 40347335 40347459 -105241829 + MIR SINE MIR 70 203 -59 235 352 19 0 chr10 40347773 40347878 -105241410 - MER94 DNA DNA 0 134 28 3667 236 88 76 chr10 40347881 40348457 -105240831 + L1M4 LINE L1 3071 3639 -2507 2139 117 0 0 chr10 40348457 40348747 -105240541 + AluSg SINE Alu 10 299 -11 7085 49 3 5 chr10 40348747 40350328 -105238960 + L1PA6 LINE L1 4570 6149 -5 3667 236 88 76 chr10 40350328 40351562 -105237726 + L1M4 LINE L1 3638 4904 -1242 1349 19 0 0 chr10 40351576 40351734 -105237554 - L1PA2 LINE L1 0 6155 5998 211 194 0 0 chr10 40353026 40353062 -105236226 + (TATG)n Simple_repeat Simple_repeat 4 39 0 21 0 0 0 chr10 40353487 40353508 -105235780 + AT_rich Low_complexity Low_complexity 1 21 0 1777 91 0 0 chr10 40353919 40354151 -105235137 + AluY SINE Alu 1 232 -79 1754 168 0 23 chr10 40354246 40354549 -105234739 - AluSx SINE Alu -16 296 1 739 176 0 7 chr10 40356113 40356255 -105233033 + AluSq/x SINE Alu 1 141 -171 1840 95 60 18 chr10 40356720 40357005 -105232283 - AluY SINE Alu -14 297 1 233 319 32 0 chr10 40357337 40357431 -105231857 - Charlie1 DNA MER1_type -2563 198 102 1152 92 0 0 chr10 40357967 40358119 -105231169 + AluY SINE Alu 3 154 -157 229 241 0 0 chr10 40358119 40358177 -105231111 - MER5A DNA MER1_type -123 66 9 255 79 0 0 chr10 40358430 40358468 -105230820 + (T)n Simple_repeat Simple_repeat 1 38 0 21 0 0 0 chr10 40358950 40358971 -105230317 + AT_rich Low_complexity Low_complexity 1 21 0 285 155 0 0 chr10 40360279 40360337 -105228951 + (TG)n Simple_repeat Simple_repeat 1 58 0 399 195 328 0 chr10 40364271 40364399 -105224889 - MER5A DNA MER1_type 0 189 20 435 106 0 0 chr10 40364914 40364980 -105224308 + (TA)n Simple_repeat Simple_repeat 2 67 0 21 0 0 0 chr10 40365437 40365458 -105223830 + AT_rich Low_complexity Low_complexity 1 21 0 1777 91 0 0 chr10 40365869 40366101 -105223187 + AluY SINE Alu 1 232 -79 1754 168 0 23 chr10 40366196 40366499 -105222789 - AluSx SINE Alu -16 296 1 1560 184 20 3 chr10 40368064 40368368 -105220920 + AluSx SINE Alu 1 309 -3 1896 90 57 23 chr10 40368491 40368791 -105220497 - AluY SINE Alu -1 310 1 233 319 32 0 chr10 40369123 40369217 -105220071 - Charlie1 DNA MER1_type -2563 198 102 1081 105 0 0 chr10 40369763 40369915 -105219373 + AluY SINE Alu 3 154 -157 253 224 0 0 chr10 40369915 40369973 -105219315 - MER5A DNA MER1_type -123 66 9 31 26 0 0 chr10 40370221 40370259 -105219029 + AT_rich Low_complexity Low_complexity 1 38 0 285 155 0 0 chr10 40372093 40372151 -105217137 + (TG)n Simple_repeat Simple_repeat 1 58 0 337 233 0 0 chr10 40376142 40376215 -105213073 - MER5A DNA MER1_type -108 81 9 19783 60 16 2 chr10 40376374 40379624 -105209664 + L1PA6 LINE L1 2729 6018 -136 6815 60 8 0 chr10 40379724 40381418 -105207870 + L1PA6 LINE L1 4419 6154 0 321 267 139 0 chr10 40381610 40381696 -105207592 - MER5A DNA MER1_type -83 106 9 2156 111 0 16 chr10 40382314 40382629 -105206659 + AluSx SINE Alu 1 310 -2 26 30 0 0 chr10 40383429 40383462 -105205826 + AT_rich Low_complexity Low_complexity 1 33 0 738 323 8 23 chr10 40384097 40384354 -105204934 + L1PA15-16 LINE L1 1309 1561 -5288 511 316 31 18 chr10 40384351 40384576 -105204712 + L1PA15-16 LINE L1 1350 1577 -5273 * 587 199 37 27 chr10 40384699 40384917 -105204371 - L1MC1 LINE L1 -343 6059 5796 * 657 249 77 30 chr10 40384915 40385027 -105204261 - L1MC1 LINE L1 -2402 3813 3708 2086 201 34 0 chr10 40385027 40385441 -105203847 - MSTA LTR MaLR 0 428 1 657 249 77 30 chr10 40385441 40385625 -105203663 - L1MC1 LINE L1 -2507 3708 3503 6737 70 5 0 chr10 40385774 40386934 -105202354 - L1PA7 LINE L1 -3 6151 4992 7027 30 10 0 chr10 40386949 40387783 -105201505 - L1PA4 LINE L1 -2 6153 5312 5981 42 1 1 chr10 40387784 40388521 -105200767 + L1P LINE L1 4099 4835 -1311 1102 106 6 0 chr10 40388518 40388678 -105200610 - L1PA7 LINE L1 -1139 5007 4847 * 443 321 68 16 chr10 40388678 40388927 -105200361 - L1MC1 LINE L1 -2724 3491 3230 1387 246 20 14 chr10 40388944 40389302 -105199986 - MLT1A1 LTR MaLR 0 365 6 933 265 43 55 chr10 40389308 40389730 -105199558 - L1MC1 LINE L1 -3009 3206 2790 1284 227 40 99 chr10 40389746 40390348 -105198940 - L1MC1 LINE L1 -3524 2691 2193 213 39 0 0 chr10 40390348 40390374 -105198914 + (TA)n Simple_repeat Simple_repeat 1 26 0 1284 227 40 99 chr10 40390374 40390610 -105198678 - L1MC1 LINE L1 -4022 2193 1944 309 268 35 63 chr10 40390760 40390902 -105198386 - L1MC1 LINE L1 -5265 1131 994 1081 346 73 24 chr10 40390906 40391579 -105197709 - L1MC1 LINE L1 -5651 745 40 338 422 64 15 chr10 40391587 40391914 -105197374 + L2 LINE L2 2930 3272 0 23 33 0 0 chr10 40392849 40392879 -105196409 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr10 40393016 40393040 -105196248 + AT_rich Low_complexity Low_complexity 1 24 0 25 51 0 0 chr10 40394287 40394326 -105194962 + AT_rich Low_complexity Low_complexity 1 39 0 425 50 17 0 chr10 40395794 40395854 -105193434 + (TA)n Simple_repeat Simple_repeat 2 62 0 280 369 62 23 chr10 40396577 40396753 -105192535 - L2 LINE L2 -410 2904 2722 2412 192 21 29 chr10 40397890 40398411 -105190877 - L1MB8 LINE L1 -9 6169 5653 252 215 154 0 chr10 40398926 40398991 -105190297 - Tigger4(Zombi) DNA MER2_type -2654 77 3 340 224 0 0 chr10 40399004 40399062 -105190226 - Tigger5 DNA MER2_type -6 2317 2260 23 33 0 0 chr10 40399596 40399626 -105189662 + AT_rich Low_complexity Low_complexity 1 30 0 27 81 0 0 chr10 40399739 40399801 -105189487 + AT_rich Low_complexity Low_complexity 1 62 0 320 127 25 76 chr10 40400183 40400262 -105189026 + MER34C LTR ERV1 423 497 -88 218 105 26 0 chr10 40400282 40400320 -105188968 + (TA)n Simple_repeat Simple_repeat 2 40 0 28 48 0 0 chr10 40400930 40400972 -105188316 + AT_rich Low_complexity Low_complexity 1 42 0 1080 239 71 14 chr10 40401604 40401901 -105187387 - L1MB8 LINE L1 -5 6173 5860 24 0 0 0 chr10 40401901 40401925 -105187363 + AT_rich Low_complexity Low_complexity 1 24 0 2538 17 0 7 chr10 40401925 40402223 -105187065 - L1PA5 LINE L1 -13 6141 5846 433 17 172 0 chr10 40402221 40402279 -105187009 + L1P LINE L1 2189 2256 -3890 * 2637 200 74 10 chr10 40402284 40403316 -105185972 - L1MB8 LINE L1 -304 5874 4771 726 300 95 5 chr10 40404675 40404934 -105184354 - MLT1G1 LTR MaLR -11 584 217 281 163 0 0 chr10 40405084 40405127 -105184161 - MLT1G1 LTR MaLR -441 126 84 1149 171 27 35 chr10 40405161 40405418 -105183870 - L1MA5 LINE L1 -3 6297 6043 1025 95 23 95 chr10 40405590 40405811 -105183477 - L1MA3 LINE L1 -1 6304 6100 299 186 0 0 chr10 40406958 40407017 -105182271 - L1MA9 LINE L1 -37 6275 6217 363 23 0 0 chr10 40408460 40408504 -105180784 + (TA)n Simple_repeat Simple_repeat 1 44 0 189 0 0 0 chr10 40408503 40408524 -105180764 + (GA)n Simple_repeat Simple_repeat 2 22 0 * 756 178 53 20 chr10 40408570 40408722 -105180566 + FAM SINE Alu 1 48 -1 32 26 0 0 chr10 40410109 40410148 -105179140 + AT_rich Low_complexity Low_complexity 1 39 0 220 309 0 0 chr10 40410298 40410353 -105178935 + L2 LINE L2 3211 3265 -7 2462 72 3 0 chr10 40411566 40411873 -105177415 - AluY SINE Alu -3 308 1 258 333 44 0 chr10 40412994 40413108 -105176180 + MIR3 SINE MIR 38 156 -52 1003 47 0 0 chr10 40414143 40414271 -105175017 - L1PA4 LINE L1 -3 6152 6025 40 21 0 0 chr10 40417087 40417134 -105172154 + AT_rich Low_complexity Low_complexity 1 47 0 27 87 0 0 chr10 40417153 40417222 -105172066 + AT_rich Low_complexity Low_complexity 1 69 0 1215 261 91 7 chr10 40417688 40418369 -105170919 - L1MC4 LINE L1 -140 7902 7012 2185 221 108 13 chr10 40418397 40418940 -105170348 - Tigger2 DNA MER2_type -2029 689 76 2447 39 0 32 chr10 40418940 40419248 -105170040 - AluY SINE Alu -12 299 2 2185 221 108 13 chr10 40419248 40419333 -105169955 - Tigger2 DNA MER2_type -2642 76 1 2611 194 20 17 chr10 40419387 40419975 -105169313 - MER6A DNA MER2_type -1 604 275 893 247 92 4 chr10 40420083 40420322 -105168966 - MER6A DNA MER2_type -344 261 2 590 265 131 39 chr10 40420904 40421293 -105167995 - L1M4 LINE L1 -1645 4501 4077 1161 275 32 47 chr10 40421377 40421882 -105167406 - MLT1E LTR MaLR 0 593 102 253 273 62 55 chr10 40421976 40422232 -105167056 - L1M4 LINE L1 -2160 3986 3729 552 202 75 87 chr10 40422547 40422720 -105166568 - MER20 DNA MER1_type -1 218 48 481 179 0 0 chr10 40422746 40422824 -105166464 + AluS SINE Alu 3 80 -233 1057 143 61 15 chr10 40422838 40423087 -105166201 - LTR54 LTR ERV1 0 510 219 1250 104 14 45 chr10 40423310 40423395 -105165893 + L1PA13 LINE L1 5951 6037 -126 2448 57 0 35 chr10 40423395 40423711 -105165577 + AluY SINE Alu 1 305 -6 1250 104 14 45 chr10 40423711 40423845 -105165443 + L1PA13 LINE L1 6037 6163 0 289 305 61 49 chr10 40426036 40426200 -105163088 - L2 LINE L2 -203 3069 2904 1710 206 19 19 chr10 40426325 40426690 -105162598 + MLT1A1 LTR MaLR 1 365 0 529 235 90 12 chr10 40428499 40428665 -105160623 + MIR SINE MIR 74 252 -10 681 177 89 0 chr10 40429011 40429135 -105160153 + MER3 DNA MER1_type 3 137 -72 3211 195 25 68 chr10 40429135 40429444 -105159844 - L1MB7 LINE L1 -10 6174 5853 2313 97 3 10 chr10 40429444 40429755 -105159533 - AluY SINE Alu -2 309 1 3211 195 25 68 chr10 40429755 40430479 -105158809 - L1MB7 LINE L1 -331 5853 5099 2404 94 3 0 chr10 40430479 40430787 -105158501 - AluY SINE Alu -2 309 1 3211 195 25 68 chr10 40430787 40430964 -105158324 - L1MB7 LINE L1 -1085 5099 5025 1356 181 34 4 chr10 40430964 40431230 -105158058 + L1PB4 LINE L1 5883 6156 0 3211 195 25 68 chr10 40431230 40431256 -105158032 - L1MB7 LINE L1 -1159 5025 4999 990 160 15 15 chr10 40431269 40431469 -105157819 - L1MB4 LINE L1 -2 6178 5979 315 233 0 0 chr10 40431481 40431554 -105157734 + MER3 DNA MER1_type 137 209 0 492 314 117 21 chr10 40431640 40432062 -105157226 + L2 LINE L2 2661 3128 -185 1072 162 23 6 chr10 40432071 40432244 -105157044 - AluJo SINE Alu -21 291 116 264 330 188 0 chr10 40432295 40432407 -105156881 + L2 LINE L2 3180 3312 -1 5877 118 2 6 chr10 40432559 40433548 -105155740 - L1P LINE L1 -2354 3792 2808 2860 76 0 8 chr10 40433566 40433947 -105155341 + L1PA8 LINE L1 5788 6165 -7 1351 251 62 44 chr10 40433971 40434487 -105154801 + L1ME3A LINE L1 4507 5044 -1111 2296 109 0 0 chr10 40434487 40434791 -105154497 + AluY SINE Alu 1 304 -7 1351 251 62 44 chr10 40434791 40435052 -105154236 + L1ME3A LINE L1 5044 5299 -856 1930 251 100 14 chr10 40435089 40435738 -105153550 + L1ME3A LINE L1 5408 6112 -58 312 243 59 22 chr10 40435801 40435937 -105153351 + L1MC5 LINE L1 7785 7925 -36 1412 149 43 0 chr10 40436606 40436861 -105152427 + L1PA16 LINE L1 5896 6161 -5 252 288 120 39 chr10 40438588 40438921 -105150367 - L1ME4a LINE L1 -31 6090 5731 3417 131 0 42 chr10 40439063 40439612 -105149676 - MER1A DNA MER1_type -1 526 1 563 261 0 50 chr10 40439615 40439795 -105149493 - L2 LINE L2 -684 2630 2460 239 260 30 80 chr10 40441041 40441141 -105148147 - MIR3 SINE MIR 0 208 114 274 325 130 15 chr10 40441191 40441572 -105147716 + MER115 DNA AcHobo 6 443 -250 244 108 0 0 chr10 40442383 40442420 -105146868 - tRNA-Met-i tRNA tRNA -38 37 1 2119 125 3 3 chr10 40442430 40442733 -105146555 - AluSx SINE Alu -3 309 7 2009 142 17 0 chr10 40442768 40443064 -105146224 - AluSq SINE Alu -12 301 1 2145 129 0 0 chr10 40443237 40443531 -105145757 - AluSq SINE Alu -19 294 1 215 274 150 43 chr10 40444282 40444455 -105144833 + MIR SINE MIR 38 225 -37 317 271 77 50 chr10 40444577 40444662 -105144626 + MER5A DNA MER1_type 4 85 -104 318 26 0 0 chr10 40444662 40444701 -105144587 + (TC)n Simple_repeat Simple_repeat 2 40 0 477 0 0 0 chr10 40444702 40444755 -105144533 + (CA)n Simple_repeat Simple_repeat 2 54 0 317 271 77 50 chr10 40444755 40444848 -105144440 + MER5A DNA MER1_type 84 189 0 181 172 0 0 chr10 40446861 40446890 -105142398 - MIR SINE MIR -14 248 220 13866 104 3 3 chr10 40447339 40449785 -105139503 - L1P3 LINE L1 -532 5622 3178 3444 43 0 0 chr10 40449780 40450224 -105139064 - L1P2 LINE L1 -378 5776 5333 * 4707 115 47 76 chr10 40450224 40451070 -105138218 - LTR12 LTR ERV1 0 826 5 7953 123 14 14 chr10 40451076 40452849 -105136439 - HERV9 LTR ERV1 0 8399 504 942 196 45 11 chr10 40454115 40454294 -105134994 + AluJo SINE Alu 121 305 -7 2045 136 3 0 chr10 40454907 40455201 -105134087 + AluSx SINE Alu 1 295 -17 1811 171 0 0 chr10 40456539 40456866 -105132422 - AluY SINE Alu 0 327 1 1696 124 4 19 chr10 40457834 40458100 -105131188 + AluY SINE Alu 1 262 -49 3126 74 11 0 chr10 40458230 40458686 -105130602 - HERV9 LTR ERV1 -1544 6855 6395 34122 102 27 25 chr10 40458686 40466506 -105122782 - HERV9 LTR ERV1 0 2438 17 4303 45 2 1 chr10 40466509 40467052 -105122236 - L1P LINE L1 -804 5347 4807 * 14278 158 97 27 chr10 40467050 40470017 -105119271 - L1P3 LINE L1 -2962 3184 12 233 338 88 7 chr10 40470299 40470447 -105118841 + MLT1K LTR MaLR 17 176 -412 2412 157 105 10 chr10 40470631 40471040 -105118248 + MER83 LTR ERV1 1 448 0 567 231 90 63 chr10 40471095 40471350 -105117938 + L1ME3A LINE L1 5904 6165 -5 21 0 0 0 chr10 40472662 40472683 -105116605 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 40473440 40473461 -105115827 + AT_rich Low_complexity Low_complexity 1 21 0 2288 105 0 0 chr10 40473772 40474067 -105115221 - AluSg SINE Alu -15 295 1 270 56 0 0 chr10 40475186 40475222 -105114066 + (TC)n Simple_repeat Simple_repeat 2 37 0 252 0 0 0 chr10 40475222 40475250 -105114038 + (CA)n Simple_repeat Simple_repeat 1 28 0 395 326 126 49 chr10 40476086 40476495 -105112793 - L2 LINE L2 -377 2937 2476 2507 210 58 67 chr10 40476495 40477224 -105112064 - MER72 LTR ERV1 0 722 1 395 326 126 49 chr10 40477224 40477344 -105111944 - L2 LINE L2 -838 2476 2367 546 206 31 0 chr10 40477584 40477681 -105111607 + Tigger3(Golem) DNA MER2_type 2928 3027 -2 1352 194 4 16 chr10 40478241 40478499 -105110789 + 7SLRNA srpRNA srpRNA 54 308 -12 22 0 0 0 chr10 40478499 40478521 -105110767 + AT_rich Low_complexity Low_complexity 1 22 0 360 0 0 0 chr10 40478521 40478561 -105110727 + (TG)n Simple_repeat Simple_repeat 1 40 0 431 257 184 7 chr10 40478578 40478730 -105110558 + MIR SINE MIR 25 203 -59 210 143 0 0 chr10 40479365 40479400 -105109888 + (GA)n Simple_repeat Simple_repeat 2 36 0 369 317 67 12 chr10 40479781 40479945 -105109343 - MIR SINE MIR -88 174 2 509 278 168 0 chr10 40481796 40481969 -105107319 - MIR SINE MIR -22 240 39 1276 203 63 40 chr10 40481976 40482325 -105106963 + MLT1A2 LTR MaLR 1 357 -17 585 158 20 0 chr10 40483801 40483902 -105105386 - HY1 scRNA scRNA 0 112 10 2410 251 40 15 chr10 40484037 40484713 -105104575 + L1ME2 LINE L1 5456 6148 -16 1295 179 22 93 chr10 40485457 40485769 -105103519 - AluJo SINE Alu -12 290 1 618 133 47 0 chr10 40486535 40486663 -105102625 + GA-rich Low_complexity Low_complexity 3 136 0 287 87 22 0 chr10 40487248 40487294 -105101994 - L1MA4A LINE L1 -6 6297 6251 396 286 92 5 chr10 40488061 40488267 -105101021 - L1ME LINE L1 -304 5817 5594 916 196 45 11 chr10 40490181 40490360 -105098928 + AluJo SINE Alu 121 305 -7 2024 139 3 0 chr10 40490973 40491267 -105098021 + AluSx SINE Alu 1 295 -17 1745 171 0 4 chr10 40492604 40492931 -105096357 - AluSg SINE Alu 0 326 1 252 0 0 0 chr10 40493098 40493126 -105096162 + (T)n Simple_repeat Simple_repeat 1 28 0 2055 147 0 3 chr10 40493668 40493981 -105095307 - AluSx SINE Alu 0 312 1 4994 62 9 0 chr10 40496928 40497510 -105091778 - LTR14C LTR ERVK 0 587 1 1482 205 27 104 chr10 40498793 40499320 -105089968 - MLT1E2 LTR MaLR -137 489 4 256 275 81 38 chr10 40499344 40499555 -105089733 - L1MEd LINE L1 -5219 900 681 354 304 30 30 chr10 40499596 40499764 -105089524 - L1MEd LINE L1 -5554 565 398 272 224 13 66 chr10 40499829 40499905 -105089383 - L1MEd LINE L1 -5744 375 304 256 268 14 0 chr10 40500076 40500147 -105089141 - L1MEd LINE L1 -6046 73 2 211 226 148 61 chr10 40500193 40500308 -105088980 + L2 LINE L2 1891 2015 -1299 1980 153 41 25 chr10 40500364 40500731 -105088557 - L1PA13 LINE L1 0 6163 5791 2147 111 3 33 chr10 40500972 40501279 -105088009 - AluSp SINE Alu -14 299 2 1953 145 0 0 chr10 40501280 40501562 -105087726 - AluSq SINE Alu -31 282 1 1603 228 58 90 chr10 40501576 40502208 -105087080 + LTR9 LTR ERV1 1 612 0 18761 175 41 29 chr10 40502208 40503633 -105085655 + HUERS-P3 LTR ERV1 1 1408 -7511 2259 106 3 0 chr10 40503633 40503936 -105085352 + AluY SINE Alu 1 304 -7 18761 175 41 29 chr10 40503936 40505800 -105083488 + HUERS-P3 LTR ERV1 1408 3338 -5581 2167 17 0 0 chr10 40505800 40506036 -105083252 - AluYb8 SINE Alu -11 307 72 18761 175 41 29 chr10 40506036 40506312 -105082976 + HUERS-P3 LTR ERV1 3338 3609 -5310 1153 199 32 0 chr10 40506312 40506528 -105082760 + HUERS-P3 LTR ERV1 6016 6238 -2681 974 282 72 9 chr10 40506528 40506847 -105082441 + LTR19C LTR ERV1 441 779 0 258 309 79 29 chr10 40506852 40506991 -105082297 + L2 LINE L2 2702 2847 -467 236 256 0 39 chr10 40507012 40507090 -105082198 - LTR67 LTR ERVL 0 557 483 3875 110 4 4 chr10 40507545 40508056 -105081232 + MER9 LTR ERVK 1 511 0 28 0 0 0 chr10 40508271 40508299 -105080989 + AT_rich Low_complexity Low_complexity 1 28 0 1057 188 43 13 chr10 40508409 40508643 -105080645 - L1PB2 LINE L1 -4284 2579 2339 * 7826 212 17 50 chr10 40508631 40511342 -105077946 + L1PB2 LINE L1 2573 5247 -1615 1507 173 34 43 chr10 40511342 40511666 -105077622 + THE1C LTR MaLR 1 321 -54 686 43 75 0 chr10 40511672 40511866 -105077422 + (TA)n Simple_repeat Simple_repeat 1 208 0 28 0 0 0 chr10 40511876 40511904 -105077384 + AT_rich Low_complexity Low_complexity 1 28 0 253 220 20 0 chr10 40511912 40511962 -105077326 + THE1C LTR MaLR 305 355 0 3983 191 33 16 chr10 40511976 40513388 -105075900 + L1PB2 LINE L1 5258 6694 -173 695 138 76 0 chr10 40513396 40513541 -105075747 + L1PB2 LINE L1 5254 5409 -742 823 116 77 7 chr10 40513544 40513699 -105075589 + L1PB2 LINE L1 5984 6149 -2 29 0 0 0 chr10 40513699 40513728 -105075560 + AT_rich Low_complexity Low_complexity 1 29 0 3625 186 41 11 chr10 40514191 40514994 -105074294 - L1MA4A LINE L1 -1 7004 6178 4058 17 0 2 chr10 40514999 40515466 -105073822 - L1PA3 LINE L1 -7 6148 5683 7430 218 85 23 chr10 40515467 40516549 -105072739 - L1MA4A LINE L1 -744 6104 5091 1991 143 10 3 chr10 40516549 40516856 -105072432 - AluSx SINE Alu -3 309 1 7430 218 85 23 chr10 40516856 40518164 -105071124 - L1MA4A LINE L1 -1757 5091 3632 274 30 0 0 chr10 40518187 40518220 -105071068 + L1PA6 LINE L1 5895 5927 -227 27 0 0 0 chr10 40520493 40520520 -105068768 + AT_rich Low_complexity Low_complexity 1 27 0 1914 236 50 43 chr10 40520691 40520854 -105068434 - L1MA4A LINE L1 -3258 3590 3430 2074 96 0 0 chr10 40520854 40521170 -105068118 - AluY SINE Alu 0 318 3 1914 236 50 43 chr10 40521170 40521990 -105067298 - L1MA4A LINE L1 -3418 3430 2602 3750 230 45 20 chr10 40522000 40523798 -105065490 - L1M2 LINE L1 -3226 3623 1776 587 204 14 14 chr10 40523799 40523946 -105065342 + L1MA10 LINE L1 6184 6330 -4 1925 254 60 21 chr10 40523950 40524465 -105064823 + MLT1H1 LTR MaLR 19 553 -2 3076 302 31 37 chr10 40524648 40524733 -105064555 - L1M2 LINE L1 -5036 1814 1730 2279 77 0 13 chr10 40524733 40525032 -105064256 + AluY SINE Alu 2 296 -15 3076 302 31 37 chr10 40525032 40526091 -105063197 - L1M2 LINE L1 -5120 1730 677 1307 291 61 104 chr10 40526192 40526866 -105062422 - L1M2 LINE L1 -6200 649 5 475 252 147 28 chr10 40526867 40527085 -105062203 - L1M4 LINE L1 -1828 4318 4075 2878 82 14 5 chr10 40527127 40527541 -105061747 - L1PA6 LINE L1 -11 6143 5726 428 286 5 70 chr10 40528664 40528849 -105060439 + MLT1D LTR MaLR 3 175 -330 23 0 0 0 chr10 40529174 40529197 -105060091 + AT_rich Low_complexity Low_complexity 1 23 0 300 277 135 0 chr10 40530850 40530998 -105058290 - L1MEc LINE L1 -4916 1480 1313 1845 92 46 11 chr10 40531031 40531292 -105057996 - AluY SINE Alu -7 304 35 2314 94 0 0 chr10 40531294 40531603 -105057685 - AluY SINE Alu -2 309 1 23 0 0 0 chr10 40531614 40531637 -105057651 + AT_rich Low_complexity Low_complexity 1 23 0 664 163 36 48 chr10 40533022 40533188 -105056100 + L1MA7 LINE L1 5980 6143 -148 * 2502 198 64 29 chr10 40533186 40533777 -105055511 - L1MA4A LINE L1 -11 6292 5681 8891 222 35 19 chr10 40533785 40534293 -105054995 - L1MA4A LINE L1 -1474 4672 4174 5420 149 25 39 chr10 40534293 40535378 -105053910 + MER11C LTR ERVK 2 1071 0 8891 222 35 19 chr10 40535378 40537225 -105052063 - L1MA4A LINE L1 -1972 4174 2279 23 33 0 0 chr10 40537463 40537493 -105051795 + AT_rich Low_complexity Low_complexity 1 30 0 22 56 0 0 chr10 40538220 40538256 -105051032 + AT_rich Low_complexity Low_complexity 1 36 0 1845 137 0 17 chr10 40538491 40538790 -105050498 - AluSq SINE Alu -14 299 6 1129 283 67 40 chr10 40538857 40539699 -105049589 + L1MB7 LINE L1 3396 4259 -1887 23 54 0 0 chr10 40539746 40539783 -105049505 + AT_rich Low_complexity Low_complexity 1 37 0 1291 301 72 17 chr10 40539783 40541241 -105048047 + L1MB7 LINE L1 4472 6174 -10 1781 220 64 10 chr10 40541371 40541776 -105047512 - L1PA16 LINE L1 -73 6093 5667 23 0 0 0 chr10 40541776 40541799 -105047489 + AT_rich Low_complexity Low_complexity 1 23 0 5062 190 42 20 chr10 40541808 40541843 -105047445 - L1PA16 LINE L1 -638 5528 5495 228 35 0 0 chr10 40541843 40541872 -105047416 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 5062 190 42 20 chr10 40541872 40543252 -105046036 - L1PA16 LINE L1 -671 5495 4089 288 111 0 0 chr10 40543428 40543473 -105045815 + (TTTA)n Simple_repeat Simple_repeat 1 45 0 2405 184 39 19 chr10 40543479 40544012 -105045276 - L1MA6 LINE L1 -6 6294 5751 406 224 0 5 chr10 40544012 40544116 -105045172 - L1M4 LINE L1 -503 6373 6273 * 5177 254 43 36 chr10 40544112 40544461 -105044827 - L1M4 LINE L1 -892 5956 5611 2079 101 0 32 chr10 40544461 40544769 -105044519 + AluY SINE Alu 1 298 -13 5177 254 43 36 chr10 40544769 40545807 -105043481 - L1M4 LINE L1 -1237 5611 4582 2159 96 0 33 chr10 40545807 40546108 -105043180 - AluY SINE Alu -20 291 1 5177 254 43 36 chr10 40546108 40546478 -105042810 - L1M4 LINE L1 -2266 4582 4180 2225 92 0 3 chr10 40546478 40546771 -105042517 - AluY SINE Alu -19 292 1 5177 254 43 36 chr10 40546771 40546987 -105042301 - L1M4 LINE L1 -2668 4180 3967 1586 187 45 15 chr10 40547407 40547739 -105041549 + MER2 DNA MER2_type 2 343 -1 31 68 0 0 chr10 40548467 40548526 -105040762 + AT_rich Low_complexity Low_complexity 1 59 0 250 319 29 58 chr10 40548556 40548694 -105040594 - LTR45 LTR ERV1 0 525 392 9307 215 67 28 chr10 40549036 40550951 -105038337 - L1MA4A LINE L1 -1 7004 5165 2073 133 0 13 chr10 40550951 40551267 -105038021 - AluSx SINE Alu 0 312 1 9307 215 67 28 chr10 40551267 40552761 -105036527 - L1MA4A LINE L1 -1840 5165 3391 2126 119 3 0 chr10 40552761 40553056 -105036232 - AluY SINE Alu -15 296 1 9307 215 67 28 chr10 40553056 40553878 -105035410 - L1MA4A LINE L1 -3614 3391 2602 2706 236 45 7 chr10 40553888 40554797 -105034491 - L1M4 LINE L1 -3226 3622 2677 271 371 45 0 chr10 40555163 40555295 -105033993 - MIR SINE MIR -20 242 105 559 284 65 12 chr10 40556426 40556595 -105032693 + MIR SINE MIR 30 207 -55 186 298 40 89 chr10 40557192 40557385 -105031903 + MIR SINE MIR 17 199 -63 203 316 0 0 chr10 40557494 40557573 -105031715 + (CCTA)n Simple_repeat Simple_repeat 4 82 0 345 340 57 21 chr10 40558616 40558810 -105030478 - MIR SINE MIR -1 261 61 521 227 58 67 chr10 40559013 40559160 -105030128 - MER112 DNA MER1_type -33 227 81 584 203 45 40 chr10 40559160 40559337 -105029951 - MER104 DNA MER2_type 0 180 3 521 227 58 67 chr10 40559337 40559414 -105029874 - MER112 DNA MER1_type -179 81 5 295 247 14 14 chr10 40559941 40560014 -105029274 - L2 LINE L2 0 3313 3241 212 338 0 0 chr10 40560562 40560633 -105028655 - MIR SINE MIR -75 187 117 446 273 23 8 chr10 40560901 40561029 -105028259 + MIR3 SINE MIR 13 142 -66 186 43 0 0 chr10 40561115 40561138 -105028150 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 2052 82 52 28 chr10 40561853 40562144 -105027144 + AluSx SINE Alu 1 298 -14 206 75 0 50 chr10 40562914 40562954 -105026334 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 2889 223 47 17 chr10 40563437 40564329 -105024959 - L1M4 LINE L1 -4160 2689 1771 532 186 16 8 chr10 40564330 40564459 -105024829 + L1MA10 LINE L1 6187 6316 -18 1538 273 54 39 chr10 40564466 40564619 -105024669 + MLT1H1 LTR MaLR 12 161 -394 2338 91 0 26 chr10 40564619 40564927 -105024361 + AluY SINE Alu 1 300 -11 1538 273 54 39 chr10 40564927 40565307 -105023981 + MLT1H1 LTR MaLR 161 553 -2 254 244 67 22 chr10 40565309 40565399 -105023889 + MLT1H1-int LTR MaLR 1 94 -1277 2922 307 29 23 chr10 40565509 40566621 -105022667 - L1M4 LINE L1 -5056 1793 676 1222 330 16 2 chr10 40566933 40567382 -105021906 - L1M4 LINE L1 -6385 464 10 775 280 102 34 chr10 40567390 40567868 -105021420 - L1M4 LINE L1 -1834 4312 3802 26 74 0 0 chr10 40568872 40568926 -105020362 + AT_rich Low_complexity Low_complexity 1 54 0 21 36 0 0 chr10 40569145 40569173 -105020115 + AT_rich Low_complexity Low_complexity 1 28 0 1051 185 10 125 chr10 40569255 40569547 -105019741 - L1MC/D LINE L1 -743 5403 5344 2126 78 0 47 chr10 40569547 40569868 -105019420 - AluY SINE Alu -1 310 5 1051 185 10 125 chr10 40569868 40570096 -105019192 - L1MC/D LINE L1 -802 5344 5091 1623 176 10 43 chr10 40570887 40571188 -105018100 - AluJo SINE Alu -21 291 1 188 273 80 57 chr10 40571594 40571682 -105017606 + L2 LINE L2 3224 3313 0 312 102 0 0 chr10 40574258 40574307 -105014981 + (TAGA)n Simple_repeat Simple_repeat 2 50 0 1516 176 40 29 chr10 40574332 40574605 -105014683 - AluJb SINE Alu -36 276 1 894 234 46 0 chr10 40574739 40574936 -105014352 + MIR SINE MIR 3 208 -54 189 0 0 0 chr10 40575773 40575794 -105013494 + (GGGA)n Simple_repeat Simple_repeat 4 24 0 535 197 16 33 chr10 40576116 40576238 -105013050 + MER45A DNA AcHobo 54 173 -5 21 0 0 0 chr10 40577192 40577213 -105012075 + AT_rich Low_complexity Low_complexity 1 21 0 215 214 24 0 chr10 40577344 40577386 -105011902 + CT-rich Low_complexity Low_complexity 5 47 0 1997 108 7 44 chr10 40577451 40577778 -105011510 - AluSx SINE Alu 0 316 1 711 224 29 35 chr10 40578173 40578347 -105010941 + MER5B DNA MER1_type 1 173 -5 367 309 22 29 chr10 40578362 40578498 -105010790 - MER5A DNA MER1_type 0 189 55 353 386 39 30 chr10 40578781 40579144 -105010144 - L2 LINE L2 -1907 1407 1042 2843 138 9 0 chr10 40579516 40579959 -105009329 - L1PA16 LINE L1 -9 6157 5711 47 44 0 0 chr10 40580533 40580601 -105008687 + AT_rich Low_complexity Low_complexity 1 68 0 2146 91 3 56 chr10 40580629 40580948 -105008340 + AluSq SINE Alu 9 310 -3 206 333 123 18 chr10 40581191 40581305 -105007983 + L2 LINE L2 3142 3267 -5 500 107 39 10 chr10 40582723 40582826 -105006462 + CT-rich Low_complexity Low_complexity 3 108 0 1095 93 0 27 chr10 40582826 40583009 -105006279 + (TTCC)n Simple_repeat Simple_repeat 3 180 0 217 313 102 39 chr10 40583211 40583339 -105005949 - L2 LINE L2 -18 3295 3160 2055 117 10 10 chr10 40585180 40585479 -105003809 - AluSg SINE Alu -11 299 1 566 259 12 57 chr10 40585786 40586033 -105003255 + MER106A DNA MER1_type 1 236 0 8216 163 102 70 chr10 40587195 40587947 -105001341 + L1MC1 LINE L1 7 733 -5693 10771 64 7 0 chr10 40587947 40590117 -104999171 + L1PA6 LINE L1 3961 6143 -11 8216 163 102 70 chr10 40590117 40590155 -104999133 + L1MC1 LINE L1 733 768 -5658 1525 206 0 24 chr10 40590155 40590442 -104998846 - AluJo SINE Alu -32 280 1 8216 163 102 70 chr10 40590442 40591991 -104997297 + L1MC1 LINE L1 768 2422 -4004 1039 208 34 47 chr10 40591987 40592367 -104996921 + L1MC1 LINE L1 3123 3497 -2929 * 5137 202 51 20 chr10 40592371 40593412 -104995876 + L1MC1 LINE L1 3917 4923 -1690 6576 117 26 18 chr10 40593412 40594474 -104994814 - MER11C LTR ERVK 0 1071 1 5137 202 51 20 chr10 40594474 40596031 -104993257 + L1MC1 LINE L1 4923 6606 -7 1507 194 51 3 chr10 40596034 40596327 -104992961 + AluJo SINE Alu 1 307 -5 198 118 0 0 chr10 40596350 40596384 -104992904 + (CAGG)n Simple_repeat Simple_repeat 3 36 0 290 221 29 0 chr10 40596438 40596506 -104992782 + L1ME LINE L1 5661 5730 -436 181 106 21 43 chr10 40599153 40599200 -104990088 + (TCCC)n Simple_repeat Simple_repeat 4 49 0 236 234 0 0 chr10 40599879 40599943 -104989345 - Charlie1 DNA MER1_type -67 2694 2631 756 279 5 22 chr10 40599956 40600178 -104989110 - Charlie1 DNA MER1_type -2542 219 2 300 333 6 18 chr10 40600371 40600536 -104988752 + CT-rich Low_complexity Low_complexity 1 163 0 2920 162 0 2 chr10 40600870 40601371 -104987917 - L1PA16 LINE L1 -20 6146 5647 327 304 71 48 chr10 40601381 40601944 -104987344 - L1MEc LINE L1 -3161 3054 2479 5428 247 72 35 chr10 40602617 40603141 -104986147 - L1ME1 LINE L1 -5 6161 5658 1108 237 17 4 chr10 40603141 40603377 -104985911 + MER8 DNA MER2_type 1 239 0 5428 247 72 35 chr10 40603377 40606001 -104983287 - L1ME1 LINE L1 -508 5658 2766 561 262 23 70 chr10 40606023 40606240 -104983048 - L1MEc LINE L1 -3716 2499 2330 3113 78 0 0 chr10 40606240 40606649 -104982639 - L1PA8 LINE L1 -2 6170 5762 561 262 23 70 chr10 40606649 40606750 -104982538 - L1MEc LINE L1 -3885 2330 2226 258 295 19 67 chr10 40606755 40606860 -104982428 + MIR SINE MIR 163 262 0 21 36 0 0 chr10 40607110 40607138 -104982150 + AT_rich Low_complexity Low_complexity 1 28 0 2444 71 3 0 chr10 40607643 40607951 -104981337 - AluY SINE Alu -2 309 1 1722 162 0 29 chr10 40609007 40609141 -104980147 + AluJo SINE Alu 1 137 -175 911 95 22 22 chr10 40609141 40609320 -104979968 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 1722 162 0 29 chr10 40609320 40609494 -104979794 + AluJo SINE Alu 137 300 -12 393 157 20 10 chr10 40611099 40611201 -104978087 + (TG)n Simple_repeat Simple_repeat 1 103 0 30 27 0 0 chr10 40613247 40613284 -104976004 + AT_rich Low_complexity Low_complexity 1 37 0 742 217 97 14 chr10 40614053 40614270 -104975018 - MIR SINE MIR -10 252 18 648 248 0 0 chr10 40614916 40615041 -104974247 - FLAM_A SINE Alu -8 125 1 234 243 29 29 chr10 40615127 40615230 -104974058 + A-rich Low_complexity Low_complexity 2 104 0 302 311 132 5 chr10 40615885 40616097 -104973191 + L1MC4a LINE L1 5693 5931 -1877 426 174 0 0 chr10 40616410 40616479 -104972809 - AluJ/FLAM SINE Alu -235 77 9 1533 166 13 67 chr10 40617519 40617832 -104971456 - AluJo SINE Alu -8 304 9 22 35 0 0 chr10 40618129 40618158 -104971130 + AT_rich Low_complexity Low_complexity 1 29 0 1626 166 21 11 chr10 40618158 40618441 -104970847 - AluJo SINE Alu -25 287 2 198 0 0 0 chr10 40619675 40619697 -104969591 + (TA)n Simple_repeat Simple_repeat 2 23 0 684 133 0 50 chr10 40619699 40619819 -104969469 - FLAM_C SINE Alu -24 119 6 453 279 23 58 chr10 40619992 40620164 -104969124 - MIR SINE MIR -56 206 41 237 183 0 100 chr10 40621029 40621089 -104968199 + LTR67 LTR ERVL 439 492 -65 1220 176 107 42 chr10 40621091 40621126 -104968162 - MLT2B1 LTR ERVL -8 512 481 297 0 0 0 chr10 40621126 40621159 -104968129 + (CAA)n Simple_repeat Simple_repeat 3 35 0 1220 176 107 42 chr10 40621159 40621565 -104967723 - MLT2B1 LTR ERVL -39 481 5 816 151 32 0 chr10 40621662 40621788 -104967500 + FLAM_C SINE Alu 1 130 -3 2104 109 0 3 chr10 40622186 40622531 -104966757 - AluY SINE Alu 0 344 1 4787 196 93 65 chr10 40623052 40623681 -104965607 - Charlie1a DNA MER1_type -1308 1453 843 1624 163 10 27 chr10 40623681 40623975 -104965313 + AluJo SINE Alu 1 289 -23 4787 196 93 65 chr10 40623975 40624758 -104964530 - Charlie1a DNA MER1_type -1918 843 1 1725 158 0 0 chr10 40624775 40625022 -104964266 + AluSx SINE Alu 46 292 -20 392 245 126 13 chr10 40625030 40625189 -104964099 - MIR SINE MIR -21 241 65 2548 123 70 29 chr10 40625630 40626045 -104963243 + MSTB1 LTR MaLR 1 432 0 2250 155 11 16 chr10 40626879 40627247 -104962041 + MLT2D LTR ERVL 1 366 -48 360 0 0 0 chr10 40627256 40627296 -104961992 + (TG)n Simple_repeat Simple_repeat 1 40 0 1717 146 58 139 chr10 40627900 40628331 -104960957 + MSTD LTR MaLR 1 396 0 635 241 107 62 chr10 40629606 40630092 -104959196 - L1MC4 LINE L1 -1 8041 7534 981 345 46 52 chr10 40630108 40630795 -104958493 + ERVL LTR ERVL 4407 5089 -675 1116 162 142 111 chr10 40630795 40631147 -104958141 - MLT1A1 LTR MaLR 0 365 3 981 345 46 52 chr10 40631147 40631385 -104957903 + ERVL LTR ERVL 5089 5327 -437 21 0 0 0 chr10 40631460 40631481 -104957807 + AT_rich Low_complexity Low_complexity 1 21 0 723 268 82 18 chr10 40631591 40631942 -104957346 + LTR16C LTR ERVL 79 491 0 365 262 7 0 chr10 40632158 40632249 -104957039 - L1MC/D LINE L1 -560 5610 5534 556 281 31 27 chr10 40632251 40632507 -104956781 - L1MCa LINE L1 -4765 1661 1405 1038 230 22 50 chr10 40632572 40632675 -104956613 - L1MC/D LINE L1 -639 5525 5421 2031 87 40 25 chr10 40632675 40633043 -104956245 - AluY SINE Alu 0 372 1 1038 230 22 50 chr10 40633043 40633434 -104955854 - L1MC/D LINE L1 -743 5421 5049 572 261 46 46 chr10 40633545 40633851 -104955437 - L1MC/D LINE L1 -1388 4758 4453 1551 240 94 27 chr10 40634062 40634431 -104954857 + MLT1C LTR MaLR 1 405 -62 1969 152 0 0 chr10 40634431 40634727 -104954561 - AluY SINE Alu -15 296 1 1551 240 94 27 chr10 40634727 40634795 -104954493 + MLT1C LTR MaLR 405 467 0 822 148 23 0 chr10 40635591 40635719 -104953569 - AluSg/x SINE Alu -22 288 158 1802 163 20 10 chr10 40636259 40636565 -104952723 - AluSx SINE Alu -1 311 3 1642 193 122 21 chr10 40636831 40636977 -104952311 + LOR1b LTR ERV1 1 131 -330 2290 93 0 20 chr10 40636977 40637278 -104952010 + AluSg SINE Alu 1 295 -15 1642 193 122 21 chr10 40637278 40637550 -104951738 + LOR1b LTR ERV1 131 461 0 345 169 133 24 chr10 40637569 40637652 -104951636 + MER63 DNA MER1_type 33 750 -86 280 182 0 0 chr10 40637689 40637733 -104951555 + Alu SINE Alu 2 45 -255 991 139 33 7 chr10 40637733 40637884 -104951404 + AluSg/x SINE Alu 137 291 -21 2254 96 0 7 chr10 40638114 40638405 -104950883 - AluY SINE Alu -22 289 1 1149 137 66 38 chr10 40638406 40638617 -104950671 - AluJo SINE Alu -9 303 87 2160 127 3 0 chr10 40638753 40639044 -104950244 + AluSx SINE Alu 1 292 -20 2186 122 3 0 chr10 40639049 40639353 -104949935 + AluSc SINE Alu 1 305 -4 1853 157 37 3 chr10 40639472 40639772 -104949516 + AluY SINE Alu 1 310 -1 396 290 83 6 chr10 40639816 40639985 -104949303 - MER5A DNA MER1_type -7 182 1 2184 94 21 0 chr10 40640068 40640354 -104948934 + AluSp SINE Alu 4 295 -18 1774 123 0 0 chr10 40640919 40641154 -104948134 - AluSq SINE Alu -78 235 1 2027 116 4 0 chr10 40641158 40641458 -104947830 - AluSp SINE Alu 0 309 9 1514 158 9 94 chr10 40641569 40641716 -104947572 + AluJo SINE Alu 1 159 -153 2430 83 0 3 chr10 40641716 40642018 -104947270 + AluSp SINE Alu 1 301 -12 1514 158 9 94 chr10 40642018 40642097 -104947191 + AluJo SINE Alu 159 193 -119 2373 92 0 0 chr10 40642097 40642400 -104946888 - AluY SINE Alu -8 303 1 1514 158 9 94 chr10 40642400 40642501 -104946787 + AluJo SINE Alu 193 301 -11 310 291 51 0 chr10 40643338 40643417 -104945871 + L2 LINE L2 3231 3313 0 2213 122 0 0 chr10 40643541 40643829 -104945459 - AluSg SINE Alu -22 288 1 2118 144 6 6 chr10 40644127 40644439 -104944849 + AluSx SINE Alu 1 312 0 2239 120 13 3 chr10 40644617 40644925 -104944363 + AluSx SINE Alu 1 311 -1 2258 102 0 23 chr10 40645240 40645545 -104943743 + AluSx SINE Alu 1 298 -14 1976 156 0 0 chr10 40646142 40646430 -104942858 + AluSx SINE Alu 1 288 -24 2054 129 3 3 chr10 40646511 40646814 -104942474 - AluSg SINE Alu -3 307 5 2089 124 3 0 chr10 40647162 40647453 -104941835 + AluSc SINE Alu 1 292 -17 1727 153 3 28 chr10 40647588 40647876 -104941412 - AluJo SINE Alu 0 312 32 1433 195 31 21 chr10 40648283 40648546 -104940742 + AluJo SINE Alu 1 269 -43 2385 89 0 3 chr10 40648546 40648849 -104940439 - AluY SINE Alu -9 302 1 1433 195 31 21 chr10 40648849 40648872 -104940416 + AluJo SINE Alu 269 290 -22 585 281 26 0 chr10 40648881 40649034 -104940254 - MIR SINE MIR 0 262 106 2237 119 0 0 chr10 40649688 40649983 -104939305 - AluSg SINE Alu -13 297 3 1969 129 35 0 chr10 40649986 40650273 -104939015 - AluSx SINE Alu -15 297 1 784 151 7 36 chr10 40650280 40650419 -104938869 - AluJb SINE Alu -176 136 2 211 209 202 78 chr10 40650564 40650693 -104938595 - MIR SINE MIR -116 146 2 2139 109 0 0 chr10 40651140 40651415 -104937873 + AluSg SINE Alu 1 275 -35 2130 131 0 0 chr10 40651978 40652269 -104937019 - AluSc SINE Alu -18 291 1 2027 117 31 0 chr10 40652496 40652787 -104936501 + AluSx SINE Alu 1 300 -12 576 106 0 0 chr10 40652787 40652872 -104936416 + (GGGGA)n Simple_repeat Simple_repeat 1 85 0 194 265 0 0 chr10 40653030 40653079 -104936209 - L2 LINE L2 -3 3269 3221 2366 113 0 0 chr10 40653559 40653868 -104935420 + AluSc SINE Alu 1 309 0 212 133 0 44 chr10 40654054 40654099 -104935189 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 1881 103 77 0 chr10 40654304 40654576 -104934712 + AluSc SINE Alu 1 293 -16 1526 180 36 11 chr10 40654585 40654935 -104934353 + AluSq SINE Alu 1 357 0 322 321 58 70 chr10 40654986 40655225 -104934063 + L1ME4a LINE L1 4747 4982 -1164 2297 89 0 3 chr10 40655225 40655516 -104933772 + AluY SINE Alu 1 290 -21 322 321 58 70 chr10 40655516 40655603 -104933685 + L1ME4a LINE L1 4982 5069 -1077 387 0 0 0 chr10 40655626 40655669 -104933619 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 1773 156 11 0 chr10 40655669 40655945 -104933343 - AluSx SINE Alu -32 280 2 1540 181 53 0 chr10 40656122 40656404 -104932884 + AluJo SINE Alu 1 297 -15 2461 81 7 0 chr10 40656463 40656772 -104932516 + AluY SINE Alu 1 311 0 1096 258 128 42 chr10 40656778 40657256 -104932032 + L1ME4a LINE L1 5315 5878 -243 1413 202 49 91 chr10 40657256 40657480 -104931808 + MSTB1 LTR MaLR 1 198 -234 1480 186 28 17 chr10 40657480 40657771 -104931517 + AluJo SINE Alu 1 294 -18 1413 202 49 91 chr10 40657771 40657996 -104931292 + MSTB1 LTR MaLR 198 431 -1 1096 258 128 42 chr10 40657996 40658162 -104931126 + L1ME4a LINE L1 5878 6028 -93 280 42 0 42 chr10 40658196 40658244 -104931044 + (TCCCC)n Simple_repeat Simple_repeat 1 46 0 820 242 0 0 chr10 40658244 40658409 -104930879 - FRAM SINE Alu -15 161 1 1794 154 6 49 chr10 40658896 40659221 -104930067 + AluSx SINE Alu 1 311 -1 467 258 92 6 chr10 40659442 40659605 -104929683 + MER69A DNA AcHobo 1 177 0 454 219 47 120 chr10 40659682 40659771 -104929517 - Charlie8 DNA MER1_type -163 178 109 2251 128 0 0 chr10 40659771 40660068 -104929220 + AluSx SINE Alu 1 297 -15 454 219 47 120 chr10 40660068 40660170 -104929118 - Charlie8 DNA MER1_type -232 109 1 1979 139 0 20 chr10 40661047 40661349 -104927939 - AluSg SINE Alu -14 296 1 1719 153 33 4 chr10 40661578 40661895 -104927393 - AluSq SINE Alu 0 325 1 1749 197 3 0 chr10 40661927 40662232 -104927056 + AluJo SINE Alu 1 306 -6 259 295 71 18 chr10 40662387 40662499 -104926789 - L2 LINE L2 0 3272 3156 1840 137 6 35 chr10 40662525 40662838 -104926450 + AluSx SINE Alu 1 304 -8 180 0 0 0 chr10 40662902 40662922 -104926366 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1643 123 0 0 chr10 40662945 40663173 -104926115 - AluSc SINE Alu -81 228 1 543 250 112 40 chr10 40663180 40663558 -104925730 - L1MEd LINE L1 -4862 1257 786 2175 142 0 0 chr10 40663748 40664059 -104925229 - AluSx SINE Alu -1 311 1 229 325 75 0 chr10 40664149 40664269 -104925019 - L1MEd LINE L1 -5482 637 509 195 304 156 44 chr10 40664660 40664795 -104924493 + MIR SINE MIR 39 188 -74 218 246 103 119 chr10 40664833 40664891 -104924397 + L2 LINE L2 3167 3224 -89 2076 130 10 0 chr10 40664891 40665184 -104924104 + AluSg SINE Alu 1 296 -14 218 246 103 119 chr10 40665184 40665251 -104924037 + L2 LINE L2 3224 3290 -23 1608 177 18 21 chr10 40665319 40665602 -104923686 + AluJo SINE Alu 1 282 -30 2254 112 0 3 chr10 40665884 40666178 -104923110 - AluSx SINE Alu -19 293 1 225 128 0 0 chr10 40666256 40666295 -104922993 - L1ME LINE L1 -415 5755 5717 1892 163 10 3 chr10 40666815 40667116 -104922172 - AluJb SINE Alu -9 303 1 1366 160 3 134 chr10 40667327 40667415 -104921873 - MER47A DNA MER2_type -1958 365 267 2017 137 3 3 chr10 40667415 40667700 -104921588 - AluSx SINE Alu -27 285 1 1366 160 3 134 chr10 40667700 40667839 -104921449 - MER47A DNA MER2_type -2056 267 111 1978 108 0 7 chr10 40667839 40668108 -104921180 + AluSq SINE Alu 38 304 -9 1366 160 3 134 chr10 40668108 40668189 -104921099 - MER47A DNA MER2_type -2212 111 113 1906 164 13 0 chr10 40668189 40668487 -104920801 - AluJb SINE Alu -2 310 9 1366 160 3 134 chr10 40668487 40668564 -104920724 - MER47A DNA MER2_type -2209 114 29 2286 110 10 0 chr10 40668566 40668875 -104920413 + AluSq SINE Alu 1 312 -1 371 220 0 60 chr10 40668916 40669016 -104920272 - MIR SINE MIR -104 158 65 2048 129 14 7 chr10 40669222 40669517 -104919771 - AluSx SINE Alu -15 297 1 1383 138 0 0 chr10 40670902 40671105 -104918183 - AluSq SINE Alu -47 266 64 484 197 0 116 chr10 40671105 40671252 -104918036 - MLT2B1 LTR ERVL -261 259 130 214 215 143 71 chr10 40671322 40671445 -104917843 + MIR SINE MIR 12 141 -67 2280 119 13 26 chr10 40671455 40671704 -104917584 + L1PA15 LINE L1 5658 5902 -263 2065 131 7 10 chr10 40671704 40672001 -104917287 + AluSx SINE Alu 1 296 -16 2280 119 13 26 chr10 40672001 40672139 -104917149 + L1PA15 LINE L1 5902 6040 -125 857 152 0 51 chr10 40672141 40672279 -104917009 + AluSq/x SINE Alu 6 136 -176 2138 127 0 0 chr10 40672279 40672562 -104916726 + AluSg SINE Alu 1 283 -27 755 169 0 7 chr10 40672582 40672724 -104916564 + L1PA15 LINE L1 6025 6165 0 2142 111 3 20 chr10 40672912 40673210 -104916078 - AluSx SINE Alu -19 293 1 5551 135 30 42 chr10 40674126 40675107 -104914181 + LTR5 LTR ERVK 1 969 0 21 0 0 0 chr10 40675365 40675386 -104913902 + AT_rich Low_complexity Low_complexity 1 21 0 2148 107 3 13 chr10 40675443 40675743 -104913545 - AluSx SINE Alu -15 297 1 2022 109 4 11 chr10 40675891 40676166 -104913122 + AluSg SINE Alu 1 273 -37 6312 172 11 11 chr10 40676172 40677491 -104911797 + MSTA-int LTR MaLR 296 1571 -9 1854 153 128 36 chr10 40677500 40677892 -104911396 + MSTA LTR MaLR 1 428 0 228 319 191 47 chr10 40678175 40678798 -104910490 - L2 LINE L2 -665 2649 1937 21 0 0 0 chr10 40679339 40679360 -104909928 + AT_rich Low_complexity Low_complexity 1 21 0 486 49 0 0 chr10 40679459 40679520 -104909768 + (TA)n Simple_repeat Simple_repeat 1 61 0 530 230 123 8 chr10 40679639 40679900 -104909388 + MER33 DNA MER1_type 17 307 -17 2316 67 0 0 chr10 40680764 40681046 -104908242 - AluY SINE Alu -13 298 17 24 53 0 0 chr10 40681067 40681105 -104908183 + AT_rich Low_complexity Low_complexity 1 38 0 2084 98 7 0 chr10 40682585 40682891 -104906397 + AluSc SINE Alu 1 308 0 239 295 0 0 chr10 40683177 40683255 -104906033 + (CATATA)n Simple_repeat Simple_repeat 6 83 0 327 383 39 0 chr10 40683336 40683516 -104905772 - HAL1 LINE L1 -104 2403 2217 26 0 0 0 chr10 40683535 40683561 -104905727 + AT_rich Low_complexity Low_complexity 1 26 0 285 119 15 30 chr10 40683589 40683656 -104905632 + (TA)n Simple_repeat Simple_repeat 1 66 0 282 297 31 40 chr10 40683946 40684168 -104905120 - HAL1 LINE L1 -722 1785 1566 1226 271 88 16 chr10 40684222 40684653 -104904635 + LTR40b LTR ERVL 1 462 0 2142 119 3 0 chr10 40685135 40685428 -104903860 - AluSx SINE Alu -14 298 5 761 161 0 8 chr10 40685443 40685567 -104903721 - AluSg/x SINE Alu -18 294 172 2076 132 3 0 chr10 40685674 40685969 -104903319 - AluSg SINE Alu -14 296 1 2090 102 10 3 chr10 40686059 40686352 -104902936 - AluY SINE Alu -16 295 1 274 196 0 18 chr10 40686557 40686613 -104902675 - MIR SINE MIR -38 224 170 1846 174 3 3 chr10 40686643 40686941 -104902347 + AluJb SINE Alu 10 307 -5 23 0 0 0 chr10 40687727 40687750 -104901538 + AT_rich Low_complexity Low_complexity 1 23 0 203 0 37 0 chr10 40687817 40687844 -104901444 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 2267 70 0 11 chr10 40687846 40688132 -104901156 - AluY SINE Alu -28 283 1 541 260 103 5 chr10 40688338 40688542 -104900746 + Charlie1 DNA MER1_type 16 239 -2522 238 77 39 58 chr10 40688592 40688644 -104900644 - Charlie1 DNA MER1_type -16 2745 2695 218 163 47 0 chr10 40688681 40688724 -104900564 + (TAGA)n Simple_repeat Simple_repeat 1 45 0 188 216 0 0 chr10 40689273 40689310 -104899978 - MIR SINE MIR -115 147 111 21 0 0 0 chr10 40691010 40691031 -104898257 + AT_rich Low_complexity Low_complexity 1 21 0 2046 148 22 27 chr10 40691148 40691514 -104897774 + THE1B LTR MaLR 1 364 0 10928 117 11 2 chr10 40691514 40693079 -104896209 + THE1B-int LTR MaLR 1 1580 0 1987 135 21 81 chr10 40693081 40693466 -104895822 + THE1B LTR MaLR 3 364 0 22 0 0 0 chr10 40693550 40693572 -104895716 + AT_rich Low_complexity Low_complexity 1 22 0 193 289 44 0 chr10 40693978 40694023 -104895265 + MER5A DNA MER1_type 103 149 -40 1024 342 47 23 chr10 40694116 40694671 -104894617 + L2 LINE L2 2260 2827 -487 2256 93 30 0 chr10 40694735 40695035 -104894253 - AluY SINE Alu -2 309 1 1338 217 24 73 chr10 40695361 40695771 -104893517 + MLT1B LTR MaLR 1 390 0 22 0 0 0 chr10 40696211 40696233 -104893055 + AT_rich Low_complexity Low_complexity 1 22 0 2170 94 14 3 chr10 40696529 40696816 -104892472 + AluY SINE Alu 1 290 -21 23 54 0 0 chr10 40696982 40697019 -104892269 + AT_rich Low_complexity Low_complexity 1 37 0 204 40 0 0 chr10 40697459 40697484 -104891804 + (TCTA)n Simple_repeat Simple_repeat 2 26 0 270 269 0 56 chr10 40698024 40698132 -104891156 + GA-rich Low_complexity Low_complexity 5 106 0 561 280 113 6 chr10 40698161 40698329 -104890959 - MIR SINE MIR -37 225 40 1448 194 17 31 chr10 40698504 40698793 -104890495 + AluJo SINE Alu 1 285 -27 354 330 86 30 chr10 40698884 40699151 -104890137 - HAL1 LINE L1 -961 1546 1265 365 318 88 40 chr10 40699241 40699515 -104889773 + L2 LINE L2 3026 3312 -1 941 205 0 133 chr10 40700881 40701227 -104888061 - MLT1B LTR MaLR 0 390 91 237 227 0 0 chr10 40701267 40701333 -104887955 + (TA)n Simple_repeat Simple_repeat 1 66 0 310 249 110 69 chr10 40701663 40701836 -104887452 - L1MC5 LINE L1 -24 7937 7758 31 26 0 0 chr10 40701870 40701908 -104887380 + AT_rich Low_complexity Low_complexity 1 38 0 762 183 23 0 chr10 40702025 40702156 -104887132 + FRAM SINE Alu 26 159 -17 2217 96 0 0 chr10 40702158 40702461 -104886827 + AluSg SINE Alu 1 303 0 1400 197 37 43 chr10 40702464 40702802 -104886486 + AluJb SINE Alu 1 336 0 25 0 0 0 chr10 40703273 40703298 -104885990 + AT_rich Low_complexity Low_complexity 1 25 0 228 24 122 0 chr10 40705012 40705053 -104884235 + L1HS LINE L1 6110 6155 0 1117 150 26 0 chr10 40705723 40705916 -104883372 - Tigger3(Golem) DNA MER2_type 0 3038 2841 1440 166 7 90 chr10 40705921 40706274 -104883014 + AluJo SINE Alu 6 333 0 3099 113 36 11 chr10 40706274 40706823 -104882465 - Tigger3(Golem) DNA MER2_type -189 2840 2278 372 188 208 0 chr10 40706800 40706901 -104882387 - Tigger3(Golem) DNA MER2_type -2907 122 1 * 288 224 60 0 chr10 40709564 40709631 -104879657 + Charlie2 DNA MER1_type 255 325 -2457 1208 208 72 12 chr10 40709634 40709980 -104879308 + Charlie2 DNA MER1_type 1857 2223 -639 848 204 218 14 chr10 40710376 40710875 -104878413 + Charlie2 DNA MER1_type 2262 2862 0 2164 172 35 16 chr10 40711650 40712074 -104877214 - MSTB1 LTR MaLR 0 432 1 2531 103 3 3 chr10 40712097 40712466 -104876822 + L1PA8 LINE L1 5801 6169 -3 438 238 197 0 chr10 40712529 40712676 -104876612 - MIR SINE MIR 0 262 87 1413 211 96 38 chr10 40712686 40713103 -104876185 - MER39 LTR ERV1 0 707 267 244 276 92 0 chr10 40713183 40713259 -104876029 - MIR SINE MIR -179 83 1 199 313 78 0 chr10 40715543 40715607 -104873681 - L2 LINE L2 -51 3221 3153 934 192 59 0 chr10 40715608 40715811 -104873477 + MER33 DNA MER1_type 1 215 -109 1714 169 11 0 chr10 40715811 40716113 -104873175 - AluJb SINE Alu 0 305 1 199 311 85 47 chr10 40716139 40716245 -104873043 + MIR SINE MIR 104 213 -49 1194 101 6 12 chr10 40717165 40717188 -104872100 - MER107 DNA MER1_type -29 168 146 182 36 0 36 chr10 40717188 40717216 -104872072 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1194 101 6 12 chr10 40717216 40717361 -104871927 - MER107 DNA MER1_type -51 146 1 221 0 35 0 chr10 40718406 40718435 -104870853 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 44006 46 6 1 chr10 40718783 40724905 -104864383 + L1PA4 LINE L1 1 6155 0 964 174 0 0 chr10 40726290 40726472 -104862816 - FRAM SINE Alu 0 179 1 526 216 122 34 chr10 40727276 40727521 -104861767 + MER34 LTR ERV1 229 542 0 332 339 60 55 chr10 40727616 40727762 -104861526 - MIR3 SINE MIR -22 186 37 1903 162 3 0 chr10 40727762 40728059 -104861229 - AluSx SINE Alu -14 298 1 332 339 60 55 chr10 40728059 40728095 -104861193 - MIR3 SINE MIR -171 37 3 1381 161 8 24 chr10 40728122 40728376 -104860912 + AluJo SINE Alu 42 291 -21 30 0 0 0 chr10 40728377 40728407 -104860881 + AT_rich Low_complexity Low_complexity 1 30 0 263 220 154 44 chr10 40728438 40728529 -104860759 - MER91B DNA MER1_type -89 101 1 1676 187 0 0 chr10 40729004 40729293 -104859995 - AluJo SINE Alu -20 292 4 2136 158 40 15 chr10 40730533 40730861 -104858427 - MER1B DNA MER1_type -1 336 1 4237 105 2 2 chr10 40731023 40731577 -104857711 + MER41A LTR ERV1 1 554 0 202 261 166 38 chr10 40731922 40732133 -104857155 - L2 LINE L2 -419 2895 2658 256 220 0 34 chr10 40732402 40732461 -104856827 + MER5A DNA MER1_type 1 57 -132 1543 192 7 13 chr10 40732519 40732821 -104856467 - AluJo SINE Alu -9 303 4 1334 101 6 6 chr10 40732838 40733016 -104856272 + AluSp SINE Alu 1 178 -135 1862 171 0 10 chr10 40733204 40733503 -104855785 + AluJb SINE Alu 1 296 -16 280 61 0 41 chr10 40733656 40733705 -104855583 + (CAT)n Simple_repeat Simple_repeat 1 47 0 189 0 0 0 chr10 40734424 40734445 -104854843 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 295 196 19 0 chr10 40735387 40735449 -104853839 - FLAM SINE Alu -16 117 71 630 149 0 0 chr10 40735457 40735551 -104853737 + AluJ/FRAM SINE Alu 216 309 -3 840 158 23 0 chr10 40736205 40736338 -104852950 + AluJo SINE Alu 1 136 -176 1569 200 7 4 chr10 40737320 40737600 -104851688 - AluJo SINE Alu -31 281 1 708 199 0 30 chr10 40738148 40738279 -104851009 - FLAM_A SINE Alu -9 133 7 276 322 43 48 chr10 40738474 40738704 -104850584 - L2 LINE L2 -450 2864 2636 2122 114 0 7 chr10 40738765 40739054 -104850234 + AluY SINE Alu 6 292 -19 1045 166 0 18 chr10 40739062 40739225 -104850063 + AluJb SINE Alu 135 294 -18 243 257 0 0 chr10 40739637 40739711 -104849577 + (TATATG)n Simple_repeat Simple_repeat 2 75 0 28 29 0 0 chr10 40739742 40739777 -104849511 + AT_rich Low_complexity Low_complexity 1 35 0 664 236 0 0 chr10 40739825 40739952 -104849336 - FLAM_A SINE Alu -6 127 1 437 240 5 88 chr10 40740036 40740115 -104849173 - L1ME LINE L1 -359 5762 5678 2155 151 10 68 chr10 40740115 40740527 -104848761 - MLT1B LTR MaLR -2 388 1 437 240 5 88 chr10 40740527 40740651 -104848637 - L1ME LINE L1 -443 5678 5576 2698 89 43 3 chr10 40740680 40741030 -104848258 - THE1B LTR MaLR 0 364 1 330 256 58 73 chr10 40741073 40741264 -104848024 - MLT1J LTR MaLR -10 501 314 791 231 187 11 chr10 40741275 40741543 -104847745 + L2 LINE L2 2932 3246 -67 354 304 0 0 chr10 40741546 40741638 -104847650 + (CA)n Simple_repeat Simple_repeat 1 92 0 379 224 19 25 chr10 40741689 40741850 -104847438 + CT-rich Low_complexity Low_complexity 4 163 0 307 274 83 0 chr10 40741857 40741941 -104847347 - MIR SINE MIR -99 109 19 810 142 8 8 chr10 40742349 40742476 -104846812 - AluJb SINE Alu -185 127 1 987 298 119 11 chr10 40742736 40743173 -104846115 + L2 LINE L2 2804 3287 -26 601 153 41 20 chr10 40743175 40743273 -104846015 - AluJo SINE Alu -25 287 188 * 812 138 17 0 chr10 40743271 40743387 -104845901 - AluJo SINE Alu -192 120 3 24 32 0 0 chr10 40743391 40743422 -104845866 + AT_rich Low_complexity Low_complexity 1 31 0 273 231 204 9 chr10 40743482 40743590 -104845698 + MER117 DNA MER1_type 4 132 -65 888 155 0 14 chr10 40744008 40744150 -104845138 - AluJb SINE Alu -16 296 157 2039 120 0 17 chr10 40745403 40745734 -104843554 + AluSc SINE Alu 1 309 0 1819 176 0 19 chr10 40746084 40746391 -104842897 + AluJo SINE Alu 1 301 -11 273 196 0 0 chr10 40746560 40746616 -104842672 + (TA)n Simple_repeat Simple_repeat 2 57 0 214 172 35 0 chr10 40746665 40746707 -104842581 + (TA)n Simple_repeat Simple_repeat 1 47 -13 5361 146 75 44 chr10 40746707 40747744 -104841544 + MER11C LTR ERVK 3 1071 0 214 172 35 0 chr10 40747744 40747759 -104841529 + (TA)n Simple_repeat Simple_repeat 47 60 0 361 113 0 0 chr10 40747895 40747957 -104841331 - L1MA7 LINE L1 -1 6290 6229 5831 261 45 28 chr10 40747957 40750464 -104838824 - L1 LINE L1 -2498 3536 1334 1226 238 74 15 chr10 40750464 40750788 -104838500 - MER2 DNA MER2_type 0 344 2 5831 261 45 28 chr10 40750788 40751840 -104837448 - L1 LINE L1 -4700 1334 302 247 307 147 43 chr10 40751951 40752277 -104837011 - L1M3a LINE L1 -5251 704 345 1172 334 7 10 chr10 40752318 40752731 -104836557 - L1M3a LINE L1 -5532 423 12 22 56 0 0 chr10 40752757 40752793 -104836495 + AT_rich Low_complexity Low_complexity 1 36 0 2111 191 30 7 chr10 40754171 40754606 -104834682 - L1MA6 LINE L1 0 6300 5856 2574 223 77 47 chr10 40754685 40755349 -104833939 + MLT1A1-int LTR MaLR 1052 1735 0 1301 231 126 3 chr10 40755349 40755674 -104833614 + MLT1A1 LTR MaLR 1 365 0 2381 78 0 7 chr10 40756203 40756511 -104832777 + AluY SINE Alu 1 306 -5 24 0 0 0 chr10 40756803 40756827 -104832461 + AT_rich Low_complexity Low_complexity 1 24 0 1456 251 35 43 chr10 40757878 40758371 -104830917 + L1ME1 LINE L1 5676 6164 -2 403 272 82 13 chr10 40758896 40759054 -104830234 - MIR SINE MIR -63 199 31 2275 84 13 10 chr10 40759130 40759429 -104829859 + AluY SINE Alu 1 300 -11 226 53 79 26 chr10 40760295 40760371 -104828917 + (TA)n Simple_repeat Simple_repeat 1 80 0 2268 88 0 41 chr10 40760418 40760736 -104828552 + AluY SINE Alu 1 305 -6 1731 102 50 79 chr10 40761226 40761529 -104827759 + AluSq SINE Alu 1 294 -19 35 0 0 0 chr10 40761540 40761575 -104827713 + AT_rich Low_complexity Low_complexity 1 35 0 394 296 96 0 chr10 40762306 40762441 -104826847 - MIR SINE MIR -66 196 49 219 208 21 0 chr10 40762810 40762858 -104826430 + L2 LINE L2 3223 3271 -1 22 0 0 0 chr10 40763335 40763357 -104825931 + AT_rich Low_complexity Low_complexity 1 22 0 462 227 127 0 chr10 40764339 40764449 -104824839 + FLAM_A SINE Alu 1 124 -9 229 368 59 34 chr10 40764464 40764510 -104824778 - L2 LINE L2 -584 2730 2687 2455 71 0 3 chr10 40764510 40764806 -104824482 + AluY SINE Alu 1 295 -16 229 368 59 34 chr10 40764806 40764963 -104824325 - L2 LINE L2 -627 2687 2522 3690 204 28 22 chr10 40764969 40765781 -104823507 + L1MB8 LINE L1 4966 5793 -385 2268 107 7 0 chr10 40765781 40766080 -104823208 - AluSq SINE Alu -12 301 1 3690 204 28 22 chr10 40766080 40766464 -104822824 + L1MB8 LINE L1 5793 6173 -5 200 254 254 36 chr10 40766679 40766844 -104822444 - L2 LINE L2 -1038 2276 2076 1875 132 10 52 chr10 40767068 40767211 -104822077 + AluSq SINE Alu 1 148 -165 2187 78 46 4 chr10 40767211 40767492 -104821796 + AluSc SINE Alu 1 293 -16 1875 132 10 52 chr10 40767492 40767658 -104821630 + AluSq SINE Alu 148 297 -16 1633 176 10 3 chr10 40768829 40769118 -104820170 - AluJo SINE Alu -21 291 1 2116 141 0 3 chr10 40769663 40769969 -104819319 + AluSq SINE Alu 1 305 -8 25 31 0 0 chr10 40770225 40770257 -104819031 + AT_rich Low_complexity Low_complexity 1 32 0 425 93 0 0 chr10 40770968 40771022 -104818266 + Alu SINE Alu 229 282 -27 2167 123 7 0 chr10 40771375 40771692 -104817596 - AluSx SINE Alu 0 312 1 25 0 0 0 chr10 40772584 40772609 -104816679 + AT_rich Low_complexity Low_complexity 1 25 0 927 273 95 48 chr10 40772746 40773262 -104816026 + MLT1F LTR MaLR 1 540 -2 21 36 0 0 chr10 40773527 40773555 -104815733 + AT_rich Low_complexity Low_complexity 1 28 0 308 235 12 71 chr10 40773856 40773941 -104815347 + Tigger3(Golem) DNA MER2_type 2 81 -2948 298 109 0 0 chr10 40773953 40773999 -104815289 - AluSx SINE Alu -2 298 253 1268 108 48 0 chr10 40773999 40774166 -104815122 - AluSx SINE Alu -137 175 1 1604 126 45 4 chr10 40774170 40774439 -104814849 + Tigger3(Golem) DNA MER2_type 2749 3028 -1 306 0 0 0 chr10 40775352 40775386 -104813902 + (TG)n Simple_repeat Simple_repeat 2 35 0 387 216 0 11 chr10 40775574 40775662 -104813626 - L1MCa LINE L1 -5762 664 578 2494 250 11 3 chr10 40775748 40776316 -104812972 - L1MCa LINE L1 -5816 610 39 1891 202 0 48 chr10 40776443 40776859 -104812429 + MSTD LTR MaLR 1 396 0 882 355 28 0 chr10 40776930 40777395 -104811893 - HERV16 LTR ERVL -3604 1392 915 320 362 122 24 chr10 40777531 40778070 -104811218 - HERV16 LTR ERVL -4337 659 68 400 324 96 42 chr10 40778149 40778554 -104810734 + LTR16A1 LTR ERVL 1 427 -30 270 337 126 26 chr10 40778561 40778950 -104810338 - LTR16A1 LTR ERVL -29 428 1 1512 211 62 130 chr10 40779076 40779943 -104809345 - L1PA15-16 LINE L1 -2895 3954 3147 6105 124 6 6 chr10 40779966 40780977 -104808311 - L1MA2 LINE L1 0 6304 5294 1022 196 10 0 chr10 40780975 40781179 -104808109 - L1MA2 LINE L1 -1977 4169 3964 * 1631 196 5 0 chr10 40781182 40781570 -104807718 - L1PA15-16 LINE L1 -3703 3146 2757 356 202 67 19 chr10 40783788 40783892 -104805396 - L1PA15-16 LINE L1 -4070 2779 2671 2796 127 42 8 chr10 40783895 40784375 -104804913 + L1PA15 LINE L1 5669 6164 -1 1918 134 36 55 chr10 40784500 40784865 -104804423 + MLT2D LTR ERVL 1 358 -56 201 74 0 0 chr10 40784882 40784909 -104804379 + (TAGG)n Simple_repeat Simple_repeat 1 27 0 198 118 0 0 chr10 40784910 40784944 -104804344 + (CA)n Simple_repeat Simple_repeat 2 35 0 219 267 0 0 chr10 40784945 40784990 -104804298 + (TATATG)n Simple_repeat Simple_repeat 4 48 0 313 48 0 0 chr10 40785172 40785214 -104804074 - U3 snRNA snRNA -175 42 1 637 279 44 3 chr10 40785371 40785669 -104803619 + L1ME3A LINE L1 2268 2577 -3569 814 319 68 19 chr10 40785684 40786255 -104803033 + L1ME3A LINE L1 5523 6121 -49 17033 34 1 0 chr10 40786487 40789322 -104799966 + L1PA3 LINE L1 3317 6152 -3 192 77 0 0 chr10 40789567 40789593 -104799695 + (A)n Simple_repeat Simple_repeat 1 26 0 244 234 36 18 chr10 40789593 40789704 -104799584 + MER20B DNA MER1_type 663 775 -8 278 247 11 0 chr10 40789923 40790016 -104799272 + (GAATG)n Simple_repeat Simple_repeat 2 95 0 962 190 61 4 chr10 40790320 40790624 -104798664 + MLT1A1 LTR MaLR 8 365 0 22 0 0 0 chr10 40791247 40791269 -104798019 + AT_rich Low_complexity Low_complexity 1 22 0 1878 248 113 20 chr10 40791997 40792245 -104797043 - L1ME2 LINE L1 -10 6088 5865 2351 88 3 3 chr10 40792245 40792542 -104796746 - AluSx SINE Alu -7 305 9 1878 248 113 20 chr10 40792542 40793230 -104796058 - L1ME2 LINE L1 -233 5865 5066 351 0 0 0 chr10 40793654 40793693 -104795595 + (TG)n Simple_repeat Simple_repeat 2 40 0 2063 258 55 46 chr10 40793693 40794570 -104794718 - L1ME2 LINE L1 -3234 2846 1978 360 0 0 0 chr10 40794570 40794610 -104794678 + (TG)n Simple_repeat Simple_repeat 2 41 0 2063 258 55 46 chr10 40794610 40794869 -104794419 - L1ME2 LINE L1 -4102 1978 1723 2081 128 13 3 chr10 40794869 40795167 -104794121 - AluSg1 SINE Alu -8 301 1 2063 258 55 46 chr10 40795167 40795591 -104793697 - L1ME2 LINE L1 -4357 1723 1304 1780 179 10 0 chr10 40795591 40795717 -104793571 + AluSx SINE Alu 1 124 -188 270 116 0 0 chr10 40795717 40795760 -104793528 + (CA)n Simple_repeat Simple_repeat 2 44 0 1780 179 10 0 chr10 40795760 40795923 -104793365 + AluSx SINE Alu 124 293 -19 2063 258 55 46 chr10 40795923 40796468 -104792820 - L1ME2 LINE L1 -4776 1304 700 296 370 62 9 chr10 40797089 40797313 -104791975 - MIR SINE MIR -20 242 7 800 260 42 75 chr10 40798388 40798902 -104790386 - MLT1H LTR MaLR 0 549 11 1612 173 14 24 chr10 40798960 40799255 -104790033 - AluJo SINE Alu -20 292 1 2499 82 0 0 chr10 40799402 40799707 -104789581 - AluY SINE Alu -2 309 5 236 211 0 58 chr10 40799815 40799867 -104789421 - L2 LINE L2 -2 3270 3222 193 316 0 0 chr10 40800326 40800383 -104788905 - MER5B DNA MER1_type -105 73 17 324 365 74 34 chr10 40800405 40800959 -104788329 - L2 LINE L2 -552 2762 2187 287 378 16 8 chr10 40800983 40801110 -104788178 - MER5A DNA MER1_type -3 186 59 1659 209 35 8 chr10 40801231 40801605 -104787683 + MLT1B LTR MaLR 1 384 -6 273 280 21 27 chr10 40802023 40802133 -104787155 + GA-rich Low_complexity Low_complexity 1 109 0 226 216 0 0 chr10 40804682 40804733 -104784555 - L1M4 LINE L1 -3311 2835 2785 1747 45 0 0 chr10 40804755 40804956 -104784332 - AluY SINE Alu -15 296 96 648 49 0 0 chr10 40805712 40805794 -104783494 + AluY SINE Alu 1 82 -229 2226 124 0 3 chr10 40806237 40806543 -104782745 + AluSq SINE Alu 5 309 -4 42 41 0 52 chr10 40806963 40807060 -104782228 + AT_rich Low_complexity Low_complexity 1 92 0 21 36 0 0 chr10 40807224 40807252 -104782036 + AT_rich Low_complexity Low_complexity 1 28 0 549 143 0 0 chr10 40807582 40807659 -104781629 - AluJ/FLAM SINE Alu -230 82 6 674 268 57 24 chr10 40807801 40808047 -104781241 + L2 LINE L2 3050 3303 -10 5373 86 18 0 chr10 40808047 40808807 -104780481 + L1PA11 LINE L1 5400 6173 -1 22 0 0 0 chr10 40808858 40808880 -104780408 + AT_rich Low_complexity Low_complexity 1 22 0 24744 40 3 3 chr10 40808921 40812763 -104776525 - L1PA4 LINE L1 0 6155 2310 706 264 11 22 chr10 40812943 40813121 -104776167 - MER45A DNA AcHobo -2 176 1 348 257 140 7 chr10 40813168 40813304 -104775984 + L2 LINE L2 3114 3267 -5 2222 114 0 0 chr10 40814511 40814792 -104774496 - AluSx SINE Alu -15 297 17 1836 203 36 31 chr10 40815099 40815548 -104773740 + pTR5 LTR ERV1 743 1193 -1245 306 368 59 18 chr10 40816420 40816692 -104772596 + HAL1 LINE L1 1105 1387 -1120 1848 153 29 132 chr10 40816936 40817420 -104771868 - Tigger2a DNA MER2_type 0 434 1 2804 188 28 33 chr10 40817788 40818393 -104770895 - LTR26 LTR ERV1 0 603 2 249 108 0 0 chr10 40818435 40818472 -104770816 + (TG)n Simple_repeat Simple_repeat 2 38 0 344 291 136 20 chr10 40818803 40818868 -104770420 + L1M4 LINE L1 2679 2735 -3411 2579 50 3 3 chr10 40818868 40819166 -104770122 + AluY SINE Alu 1 298 -13 344 291 136 20 chr10 40819166 40819402 -104769886 + L1M4 LINE L1 2735 3015 -3131 668 168 8 0 chr10 40820574 40820699 -104768589 + L1MA7 LINE L1 6166 6291 0 418 291 81 45 chr10 40821400 40821758 -104767530 - L1MDa LINE L1 -2602 3938 3568 6695 83 23 19 chr10 40821760 40821850 -104767438 - L1MA3 LINE L1 0 6305 6217 2087 128 7 7 chr10 40821850 40822147 -104767141 + AluSg SINE Alu 1 297 -13 6695 83 23 19 chr10 40822147 40823027 -104766261 - L1MA3 LINE L1 -88 6217 5331 * 10848 162 12 7 chr10 40823024 40824760 -104764528 - L1M1 LINE L1 -5807 1758 14 1533 266 46 14 chr10 40824995 40825514 -104763774 - L1ME3A LINE L1 -260 5910 5375 2409 124 40 26 chr10 40825525 40825903 -104763385 + MSTC LTR MaLR 1 383 -45 841 171 42 10 chr10 40825921 40826114 -104763174 - L1MDa LINE L1 -3530 3010 2812 * 2325 193 95 83 chr10 40826111 40826406 -104762882 - L1MDa LINE L1 -4000 2540 2250 2087 119 3 3 chr10 40826406 40826730 -104762558 - AluSx SINE Alu 0 324 1 2325 193 95 83 chr10 40826730 40827267 -104762021 - L1MDa LINE L1 -4290 2250 1697 303 184 0 6 chr10 40827272 40827347 -104761941 + MLT2B1 LTR ERVL 443 520 0 1322 257 169 35 chr10 40827353 40827976 -104761312 + L1MC4a LINE L1 6784 7489 -319 404 256 133 15 chr10 40827979 40828174 -104761114 + L1MC4 LINE L1 7759 7976 -66 763 265 51 8 chr10 40828318 40828552 -104760736 + MIR SINE MIR 18 261 -1 2683 73 35 0 chr10 40828900 40829243 -104760045 + THE1A LTR MaLR 1 355 0 472 255 145 30 chr10 40829703 40830058 -104759230 - MLT1H LTR MaLR -2 547 125 270 342 29 23 chr10 40830412 40830719 -104758569 + L1ME3A LINE L1 4978 5286 -860 666 284 41 5 chr10 40830729 40830923 -104758365 + MER63A DNA MER1_type 4 204 -6 1022 288 92 42 chr10 40830924 40830987 -104758301 + L1ME3A LINE L1 5285 5343 -827 2182 141 79 12 chr10 40830987 40831392 -104757896 - MSTB1 LTR MaLR 0 432 1 1022 288 92 42 chr10 40831392 40831995 -104757293 + L1ME3A LINE L1 5343 5984 -186 444 19 0 0 chr10 40832596 40832649 -104756639 + (CA)n Simple_repeat Simple_repeat 2 54 0 1097 183 18 14 chr10 40833337 40833556 -104755732 - AluJb SINE Alu -8 304 85 1009 282 120 30 chr10 40833576 40834108 -104755180 + L1MC4a LINE L1 5316 5895 -1913 862 221 89 70 chr10 40834515 40834931 -104754357 + MLT1H1 LTR MaLR 96 368 -6 1014 141 82 5 chr10 40835280 40835464 -104753824 + L1PB1 LINE L1 3 200 -6663 3274 113 58 16 chr10 40835464 40835968 -104753320 + L1PB1 LINE L1 634 1158 -5705 992 94 0 8 chr10 40835983 40836110 -104753178 - AluSp/q SINE Alu -20 293 168 2554 92 129 1 chr10 40836111 40836559 -104752729 + L1PB1 LINE L1 2521 3025 -3837 550 97 0 0 chr10 40836560 40836632 -104752656 - L1PBa LINE L1 -4385 2478 2407 4624 60 15 32 chr10 40836633 40837682 -104751606 - MER11A LTR ERVK 0 1266 1 1820 87 64 0 chr10 40837682 40837948 -104751340 - L1PBa LINE L1 -4453 2410 2128 * 13612 172 9 29 chr10 40837947 40841808 -104747480 + L1PB1 LINE L1 3032 6823 -44 656 243 53 21 chr10 40842307 40842496 -104746792 + MER58A DNA MER1_type 18 212 -12 2060 144 0 0 chr10 40842655 40842946 -104746342 + AluSx SINE Alu 1 291 -21 230 219 36 95 chr10 40842948 40843085 -104746203 + L1ME4a LINE L1 5255 5383 -2425 308 319 76 29 chr10 40843157 40843539 -104745749 + L1ME4a LINE L1 5492 5891 -230 216 171 0 0 chr10 40843584 40843619 -104745669 + (TG)n Simple_repeat Simple_repeat 2 36 0 685 276 134 30 chr10 40843682 40844143 -104745145 - MLT1J LTR MaLR 0 511 3 832 156 16 0 chr10 40844398 40844526 -104744762 + AluJb SINE Alu 3 132 -180 1145 233 66 3 chr10 40844792 40845079 -104744209 + L1MDb LINE L1 18 322 -6087 1791 188 53 53 chr10 40845079 40845584 -104743704 - MLT1D LTR MaLR 0 505 1 1182 226 22 194 chr10 40845586 40846356 -104742932 - MLT1D-int LTR MaLR -2 1369 732 * 3327 187 81 45 chr10 40846354 40847200 -104742088 + L1MDb LINE L1 324 1295 -5111 2102 86 54 4 chr10 40847200 40847479 -104741809 + AluY SINE Alu 2 294 -17 3327 187 81 45 chr10 40847479 40847886 -104741402 + L1MDb LINE L1 1295 1686 -4720 1595 206 34 6 chr10 40847973 40848370 -104740918 - MLT2B1 LTR ERVL -59 456 3 521 222 169 29 chr10 40848373 40848580 -104740708 - L1MC4a LINE L1 -1027 6781 6546 1487 199 14 7 chr10 40848580 40848867 -104740421 + LOR1b LTR ERV1 65 353 -108 458 81 189 0 chr10 40848855 40848929 -104740359 + LOR1a LTR ERV1 410 497 0 * 429 294 107 56 chr10 40849056 40849913 -104739375 - L1MEc LINE L1 -2416 3799 2862 2289 96 3 0 chr10 40849913 40850204 -104739084 + AluSc SINE Alu 1 292 -17 429 294 107 56 chr10 40850204 40850547 -104738741 - L1MEc LINE L1 -3353 2862 2538 237 226 16 0 chr10 40850655 40850717 -104738571 + HsTC2 DNA Tc2 2 64 -1834 334 222 100 11 chr10 40850719 40850809 -104738479 + L1MB1 LINE L1 6008 6105 -63 359 191 0 0 chr10 40850809 40850872 -104738416 + AluJ/FRAM SINE Alu 226 288 -14 321 178 27 0 chr10 40850889 40850962 -104738326 + L1MB1 LINE L1 6093 6167 -1 847 221 29 5 chr10 40851000 40851204 -104738084 + HsTC2 DNA Tc2 93 301 -1597 * 2683 218 93 30 chr10 40851198 40851618 -104737670 + HsTC2 DNA Tc2 146 538 -1362 2387 107 0 0 chr10 40851618 40851927 -104737361 + AluSx SINE Alu 1 309 -3 2683 218 93 30 chr10 40851927 40852374 -104736914 + HsTC2 DNA Tc2 538 1653 -247 1910 147 0 7 chr10 40852421 40852700 -104736588 - AluSx SINE Alu -15 297 21 356 256 41 20 chr10 40852705 40852900 -104736388 - L1MEc LINE L1 -3866 2349 2180 588 302 98 23 chr10 40853357 40853870 -104735418 - HAL1 LINE L1 -849 1658 1108 869 262 172 11 chr10 40853915 40854281 -104735007 - L1MC4a LINE L1 -2056 5752 5328 764 284 53 82 chr10 40854509 40854975 -104734313 - L1MC4a LINE L1 -807 5339 4914 2314 89 3 3 chr10 40854975 40855279 -104734009 + AluY SINE Alu 3 306 -5 764 284 53 82 chr10 40855279 40855774 -104733514 - L1MC4a LINE L1 -1232 4914 4406 1733 179 0 26 chr10 40855803 40856111 -104733177 - AluJo SINE Alu -10 302 3 3719 180 41 25 chr10 40856182 40856986 -104732302 - L1MB7 LINE L1 -85 6099 5283 674 354 80 31 chr10 40857182 40857774 -104731514 - L1MC4a LINE L1 -2024 4122 3483 2025 171 118 12 chr10 40857774 40858196 -104731092 - MLT1C LTR MaLR 0 467 1 674 354 80 31 chr10 40858196 40858365 -104730923 - L1MC4a LINE L1 -2663 3483 3324 584 249 43 80 chr10 40858645 40858970 -104730318 - L1ME1 LINE L1 -16 6150 5838 232 239 99 76 chr10 40864293 40864437 -104724851 - MIR SINE MIR -63 145 38 262 320 55 32 chr10 40864555 40864774 -104724514 + L1M4 LINE L1 4943 5166 -980 227 264 0 0 chr10 40865337 40865390 -104723898 + (TG)n Simple_repeat Simple_repeat 2 54 0 3774 116 11 20 chr10 40865966 40866519 -104722769 + LTR14 LTR ERVK 1 548 0 382 239 255 8 chr10 40868163 40868414 -104720874 - L2 LINE L2 -176 3137 2825 994 257 44 42 chr10 40868732 40869133 -104720155 + L1MD1 LINE L1 338 1047 -5493 * 9597 210 51 54 chr10 40869128 40872192 -104717096 + L1MD1 LINE L1 1345 4418 -2218 697 176 7 0 chr10 40872192 40872334 -104716954 + L1MB4 LINE L1 6037 6179 -1 9597 210 51 54 chr10 40872334 40873605 -104715683 + L1MD1 LINE L1 4418 5642 -994 1746 137 0 4 chr10 40873605 40873875 -104715413 + AluSg SINE Alu 35 303 -7 9597 210 51 54 chr10 40873875 40874235 -104715053 + L1MD1 LINE L1 5642 6002 -634 * 36977 64 4 3 chr10 40874234 40879779 -104709509 + L1PA5 LINE L1 603 6152 -2 1599 164 40 16 chr10 40879904 40880208 -104709080 + AluSx SINE Alu 1 311 -1 3119 144 13 105 chr10 40880209 40880912 -104708376 + L1MD1 LINE L1 5999 6636 0 766 292 51 48 chr10 40881018 40881412 -104707876 - HAL1 LINE L1 -7 2500 2106 394 315 142 23 chr10 40881433 40881827 -104707461 - L2 LINE L2 -1 3312 2872 1351 208 64 9 chr10 40883332 40883678 -104705610 - MLT1A1 LTR MaLR 0 365 1 201 279 81 0 chr10 40884249 40884360 -104704928 - L2 LINE L2 -825 2489 2370 296 152 0 0 chr10 40886632 40886678 -104702610 - MLT1L LTR MaLR -221 394 349 472 302 63 31 chr10 40887129 40887351 -104701937 - L3 LINE CR1 -38 1539 1311 2452 271 69 31 chr10 40887396 40888567 -104700721 + L1MEc LINE L1 974 2189 -4207 3147 236 138 28 chr10 40888593 40888916 -104700372 + L1M4b LINE L1 17 303 -6556 1596 249 64 19 chr10 40888916 40889397 -104699891 + MLT1D LTR MaLR 3 505 0 3147 236 138 28 chr10 40889397 40889995 -104699293 + L1M4b LINE L1 303 1039 -5820 443 279 105 22 chr10 40890029 40890295 -104698993 - L1M4 LINE L1 -1076 5070 4785 497 349 49 29 chr10 40890338 40890952 -104698336 - L1MEd LINE L1 -5483 636 11 1894 133 10 26 chr10 40891284 40891586 -104697702 + AluJb SINE Alu 1 297 -15 4611 212 74 18 chr10 40894418 40896021 -104693267 - L1MD1 LINE L1 0 6242 4538 4764 238 53 6 chr10 40896023 40897420 -104691868 - L1MD1 LINE L1 -1702 4444 2983 243 185 0 15 chr10 40897708 40897773 -104691515 - L1ME4a LINE L1 -9 6112 6049 2397 122 0 21 chr10 40897857 40898233 -104691055 - L1PB1 LINE L1 -2 6149 5782 315 0 0 0 chr10 40898268 40898303 -104690985 + (CA)n Simple_repeat Simple_repeat 2 36 0 3836 117 1 13 chr10 40898309 40898497 -104690791 - L1PB1 LINE L1 -360 5791 5602 4743 166 52 50 chr10 40898497 40899566 -104689722 + MER11C LTR ERVK 1 1071 0 3836 117 1 13 chr10 40899566 40900138 -104689150 - L1PB1 LINE L1 -549 5602 5039 444 245 180 12 chr10 40900150 40900395 -104688893 - L1ME4a LINE L1 -241 5880 5595 38 0 0 0 chr10 40902890 40902928 -104686360 + AT_rich Low_complexity Low_complexity 1 38 0 802 180 267 8 chr10 40902983 40903226 -104686062 - L1MA9 LINE L1 -74 6238 5934 1994 132 0 3 chr10 40903226 40903530 -104685758 + AluSp SINE Alu 1 303 -10 802 180 267 8 chr10 40903530 40903542 -104685746 - L1MA9 LINE L1 -378 5934 5926 8936 204 30 50 chr10 40903556 40903945 -104685343 + L1 LINE L1 2546 2941 -3205 2270 90 3 0 chr10 40903945 40904246 -104685042 + AluSq SINE Alu 1 302 -11 8936 204 30 50 chr10 40904246 40906781 -104682507 + L1 LINE L1 2941 5336 -810 2241 64 3 32 chr10 40907532 40907844 -104681444 - AluY SINE Alu 0 311 9 967 235 66 85 chr10 40908342 40909123 -104680165 + HSREP522 Satellite telomeric 1 765 -267 1997 133 0 3 chr10 40910300 40910594 -104678694 - AluSx SINE Alu -19 293 1 376 317 7 0 chr10 40910614 40910756 -104678532 + CT-rich Low_complexity Low_complexity 2 144 0 1314 176 86 8 chr10 40911985 40912241 -104677047 + LOR1-int LTR ERV1 2079 2354 -3592 829 185 36 5 chr10 40912240 40912435 -104676853 + LOR1-int LTR ERV1 1839 2039 -6081 * 2512 154 52 4 chr10 40912449 40912911 -104676377 + LOR1-int LTR ERV1 2745 3228 -2718 357 204 92 71 chr10 40912915 40913111 -104676177 + LOR1-int LTR ERV1 3329 3528 -2418 260 333 0 0 chr10 40913381 40913465 -104675823 + L1MC/D LINE L1 5697 5780 -2028 21 0 0 0 chr10 40914496 40914517 -104674771 + AT_rich Low_complexity Low_complexity 1 21 0 938 248 28 0 chr10 40914729 40914947 -104674341 - MER58A DNA MER1_type 0 224 1 2159 177 40 113 chr10 40914996 40915625 -104673663 - LTR9 LTR ERV1 0 612 30 2070 134 0 13 chr10 40915625 40915930 -104673358 - AluSx SINE Alu -11 301 1 2159 177 40 113 chr10 40915930 40915945 -104673343 - LTR9 LTR ERV1 -582 30 15 1827 149 3 44 chr10 40916069 40916213 -104673075 + AluSx SINE Alu 1 149 -163 2045 86 0 0 chr10 40916213 40916469 -104672819 + AluSg SINE Alu 43 298 -12 1827 149 3 44 chr10 40916469 40916639 -104672649 + AluSx SINE Alu 149 302 -10 892 176 45 11 chr10 40917086 40917262 -104672026 - MLT1A2 LTR MaLR -4 370 189 268 222 13 12 chr10 40917282 40917532 -104671756 + GA-rich Low_complexity Low_complexity 1 250 0 736 162 45 39 chr10 40917563 40917717 -104671571 - MLT1A2 LTR MaLR -215 159 5 1234 208 20 0 chr10 40917748 40918003 -104671285 + MLT1B LTR MaLR 9 268 -122 4448 105 126 146 chr10 40918003 40919513 -104669775 + pTR5 LTR ERV1 743 2438 0 624 147 18 0 chr10 40919517 40919626 -104669662 + MLT1B LTR MaLR 266 376 -14 2207 109 0 0 chr10 40920465 40920759 -104668529 + AluSq SINE Alu 1 294 -19 4315 179 42 20 chr10 40921213 40922114 -104667174 - MER49 LTR ERV1 -2 921 1 1786 140 57 0 chr10 40923009 40923288 -104666000 - AluJb SINE Alu -17 295 1 2317 88 0 26 chr10 40923296 40923602 -104665686 - AluSx SINE Alu -14 298 1 38 0 0 0 chr10 40923602 40923640 -104665648 + AT_rich Low_complexity Low_complexity 1 38 0 1419 184 15 0 chr10 40923640 40923911 -104665377 - L1PA16 LINE L1 -14 6152 5878 205 302 56 79 chr10 40923911 40924037 -104665251 - L2 LINE L2 -8 3264 3142 1342 139 4 62 chr10 40926740 40926812 -104662476 - Tigger5 DNA MER2_type 0 2323 2248 1913 145 26 0 chr10 40926812 40927116 -104662172 + AluSx SINE Alu 1 312 0 1342 139 4 62 chr10 40927116 40927287 -104662001 - Tigger5 DNA MER2_type -75 2248 2094 1745 173 6 43 chr10 40928353 40928676 -104660612 - AluJo SINE Alu -1 311 1 712 183 85 12 chr10 40929396 40929560 -104659728 + MLT1B LTR MaLR 2 177 -213 522 167 48 24 chr10 40929605 40929773 -104659515 + (TCTCTG)n Simple_repeat Simple_repeat 3 174 0 659 202 105 20 chr10 40929776 40929960 -104659328 + MLT1B LTR MaLR 204 374 -16 268 324 112 0 chr10 40931362 40931532 -104657756 + MIR SINE MIR 74 262 0 257 61 0 0 chr10 40932262 40932295 -104656993 - L2 LINE L2 -19 3294 3262 1959 180 30 22 chr10 40932860 40933260 -104656028 - MER57A LTR ERV1 0 403 1 2230 103 0 42 chr10 40933685 40933996 -104655292 - AluSx SINE Alu -14 298 1 461 175 66 81 chr10 40934504 40934715 -104654573 + Charlie4a DNA MER1_type 207 414 -94 382 193 104 15 chr10 40934731 40934866 -104654422 + Charlie4a DNA MER1_type 356 502 -6 197 191 24 0 chr10 40934964 40935006 -104654282 + L2 LINE L2 3265 3307 -6 1440 193 57 33 chr10 40935243 40935611 -104653677 + LTR40b LTR ERVL 84 460 -2 1615 200 29 0 chr10 40936440 40936720 -104652568 - AluJo SINE Alu -24 288 1 720 219 65 145 chr10 40936722 40936900 -104652388 - L1ME LINE L1 -5165 905 714 2355 79 0 7 chr10 40936900 40937191 -104652097 - AluSg SINE Alu -21 289 1 720 219 65 145 chr10 40937191 40937216 -104652072 - L1ME LINE L1 -5356 714 689 2164 102 7 7 chr10 40937216 40937511 -104651777 + AluSp SINE Alu 1 295 -18 720 219 65 145 chr10 40937511 40937554 -104651734 - L1ME LINE L1 -5381 689 644 2087 127 10 19 chr10 40937554 40937862 -104651426 + AluSq SINE Alu 1 305 -8 720 219 65 145 chr10 40937862 40938270 -104651018 - L1ME LINE L1 -5426 644 301 3376 231 117 33 chr10 40938321 40939444 -104649844 - L1MC4 LINE L1 -299 7743 6527 1781 164 27 7 chr10 40941026 40941324 -104647964 - AluJb SINE Alu -8 304 1 2043 146 0 3 chr10 40941355 40941649 -104647639 + AluSg SINE Alu 1 293 -17 312 237 44 53 chr10 40941973 40942087 -104647201 - MLT1K LTR MaLR -323 265 153 231 290 32 0 chr10 40942205 40942267 -104647021 + L1 LINE L1 4911 4974 -1172 344 256 202 42 chr10 40942576 40942744 -104646544 - MLT1L LTR MaLR 0 615 421 775 266 40 0 chr10 40943064 40943286 -104646002 - MIR SINE MIR -21 241 11 336 269 0 0 chr10 40943288 40943366 -104645922 + MER58 DNA MER1_type 1 78 -137 25 0 0 0 chr10 40943732 40943757 -104645531 + AT_rich Low_complexity Low_complexity 1 25 0 2302 152 11 48 chr10 40943884 40944318 -104644970 - LTR3 LTR ERVK -10 422 5 6502 119 51 16 chr10 40944494 40945528 -104643760 + MER11C LTR ERVK 1 1071 0 2058 116 27 7 chr10 40945763 40946056 -104643232 - AluSx SINE Alu -11 301 3 1143 166 21 0 chr10 40946245 40946438 -104642850 + Tigger6 DNA MER2_type 1 197 -886 44285 45 4 3 chr10 40946440 40952589 -104636699 + L1PA4 LINE L1 2 6155 0 826 220 11 11 chr10 40952598 40952775 -104636513 + Tigger6 DNA MER2_type 182 358 -1239 2254 108 7 0 chr10 40952786 40953081 -104636207 + AluSg SINE Alu 1 297 -13 250 306 0 0 chr10 40953094 40953156 -104636132 + Tigger6 DNA MER2_type 1536 1597 0 1841 108 8 0 chr10 40953806 40954055 -104635233 + AluSx SINE Alu 41 291 -21 893 156 54 6 chr10 40954154 40954321 -104634967 + L1M3 LINE L1 5446 5620 -563 1637 165 71 43 chr10 40954326 40954678 -104634610 - MLT1B LTR MaLR -3 387 26 860 176 77 12 chr10 40954665 40954790 -104634498 + MLT2C1 LTR ERVL 217 357 -40 * 210 118 0 0 chr10 40954790 40954824 -104634464 + (CA)n Simple_repeat Simple_repeat 2 35 0 860 176 77 12 chr10 40954824 40954868 -104634420 + MLT2C1 LTR ERVL 357 397 0 376 211 56 106 chr10 40954928 40955108 -104634180 + MLT1D LTR MaLR 335 505 0 1955 139 37 7 chr10 40955576 40955871 -104633417 - AluSx SINE Alu -8 304 1 233 280 10 5 chr10 40956723 40956813 -104632475 + MIR SINE MIR 54 144 -64 240 267 95 52 chr10 40957644 40957760 -104631528 + MIR SINE MIR 77 197 -65 7790 29 17 0 chr10 40958337 40959500 -104629788 - L1PA2 LINE L1 -1 6154 4985 15523 33 2 1 chr10 40959500 40961341 -104627947 + L1PA2 LINE L1 3171 5014 -1132 255 203 176 0 chr10 40961855 40961929 -104627359 + MLT1C LTR MaLR 6 92 -375 286 122 0 0 chr10 40962183 40962224 -104627064 - MER70-int LTR ERVL -2428 2595 2555 852 201 34 95 chr10 40963010 40963274 -104626014 + MLT1C-int LTR MaLR 1123 1370 -1 2068 166 30 38 chr10 40963282 40963753 -104625535 + MLT1C LTR MaLR 1 467 0 978 238 23 4 chr10 40964130 40964386 -104624902 + L1M4 LINE L1 4951 5211 -935 2297 92 7 0 chr10 40964623 40964915 -104624373 - AluSp SINE Alu -19 294 1 535 326 50 16 chr10 40965053 40965311 -104623977 + ERVL LTR ERVL 2064 2330 -3434 282 295 112 27 chr10 40965306 40965530 -104623758 + ERVL LTR ERVL 2477 2719 -3045 * 1179 321 108 58 chr10 40965531 40966766 -104622522 + ERVL LTR ERVL 2698 4002 -1483 321 176 12 35 chr10 40967650 40967735 -104621553 - L1M4 LINE L1 -978 5168 5086 234 221 44 0 chr10 40967731 40967799 -104621489 + L1MB7 LINE L1 4677 4747 -1399 * 2141 129 0 0 chr10 40967799 40968093 -104621195 + AluY SINE Alu 1 294 -17 24 53 0 0 chr10 40968093 40968131 -104621157 + AT_rich Low_complexity Low_complexity 1 38 0 326 222 33 0 chr10 40968134 40968224 -104621064 + L1MB7 LINE L1 4741 4833 -1313 207 0 0 0 chr10 40968309 40968332 -104620956 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1270 215 96 45 chr10 40968333 40968788 -104620500 + L1MB7 LINE L1 4845 5275 -909 2248 103 23 0 chr10 40968788 40969088 -104620200 + AluSq SINE Alu 1 307 -6 1270 215 96 45 chr10 40969088 40969140 -104620148 + L1MB7 LINE L1 5275 5323 -861 2134 138 0 0 chr10 40969140 40969437 -104619851 + AluSx SINE Alu 1 297 -15 1270 215 96 45 chr10 40969437 40969674 -104619614 + L1MB7 LINE L1 5323 5939 -245 1395 157 0 0 chr10 40969678 40969888 -104619400 - AluSg/x SINE Alu -17 295 86 501 234 101 10 chr10 40969890 40970099 -104619189 + L1MB7 LINE L1 5941 6168 -16 2329 74 0 32 chr10 40970781 40971092 -104618196 + AluY SINE Alu 1 301 -10 1595 179 17 30 chr10 40971100 40971232 -104618056 + AluJo SINE Alu 1 133 -179 2359 77 3 22 chr10 40971232 40971510 -104617778 + AluSc SINE Alu 1 274 -35 243 0 0 0 chr10 40971510 40971537 -104617751 + (TAAA)n Simple_repeat Simple_repeat 1 27 0 2359 77 3 22 chr10 40971537 40971571 -104617717 + AluSc SINE Alu 274 307 -2 1595 179 17 30 chr10 40971571 40971740 -104617548 + AluJo SINE Alu 133 298 -14 2324 77 40 3 chr10 40971844 40972143 -104617145 - AluY SINE Alu -1 310 1 343 180 0 0 chr10 40972530 40972591 -104616697 + L1MD3 LINE L1 6877 6937 -1058 1016 262 162 27 chr10 40972628 40973079 -104616209 - REP3 LTR ERV -50 512 1 491 213 140 0 chr10 40973079 40973243 -104616045 + L1MC3 LINE L1 6911 7097 -688 330 259 0 12 chr10 40973253 40973334 -104615954 + MLT1F1 LTR MaLR 46 125 -442 2063 203 91 15 chr10 40973334 40973853 -104615435 + L1MD3 LINE L1 7404 7969 -26 2214 93 0 10 chr10 40973853 40974144 -104615144 + AluSg SINE Alu 1 288 -22 2063 203 91 15 chr10 40974144 40974172 -104615116 + L1MD3 LINE L1 7969 7993 -2 1830 159 14 10 chr10 40977024 40977319 -104611969 - AluSx SINE Alu -15 297 2 650 181 39 8 chr10 40977829 40977956 -104611332 - MIR SINE MIR -67 195 65 3901 173 50 21 chr10 40978056 40979245 -104610043 + L1MB7 LINE L1 4947 6168 -16 389 243 35 28 chr10 40979256 40979400 -104609888 + L1MC4a LINE L1 5814 5958 -1850 21 104 0 0 chr10 40980013 40980090 -104609198 + AT_rich Low_complexity Low_complexity 1 77 0 1808 108 0 0 chr10 40980141 40980373 -104608915 + AluSc SINE Alu 62 293 -16 338 312 95 11 chr10 40980509 40980698 -104608590 + L1ME LINE L1 4811 5015 -1131 901 160 0 14 chr10 40980727 40980871 -104608417 + FLAM_C SINE Alu 1 142 -1 4559 103 0 2 chr10 40980922 40981553 -104607735 - L1PA15 LINE L1 -13 6152 5523 2370 103 0 0 chr10 40981561 40981863 -104607425 - AluSx SINE Alu -10 302 1 2068 124 0 0 chr10 40981897 40982187 -104607101 + AluY SINE Alu 2 291 -20 293 274 98 13 chr10 40982422 40982579 -104606709 + L1ME LINE L1 5360 5528 -638 1695 169 20 23 chr10 40983624 40983925 -104605363 - AluJo SINE Alu -12 300 1 356 295 74 25 chr10 40984770 40984892 -104604396 + MIR3 SINE MIR 3 130 -78 731 100 0 17 chr10 40984892 40985012 -104604276 - AluJb SINE Alu 0 312 195 22 56 0 0 chr10 40985175 40985211 -104604077 + AT_rich Low_complexity Low_complexity 1 36 0 1687 152 0 28 chr10 40985218 40985543 -104603745 - AluJb SINE Alu 0 317 1 300 240 13 0 chr10 40986066 40986141 -104603147 + L1M4 LINE L1 4866 4941 -1205 227 232 73 12 chr10 40986137 40986219 -104603069 + L1M4 LINE L1 2300 2386 -3760 * 819 195 129 9 chr10 40986230 40986440 -104602848 + MER93b LTR ERV1 113 347 -26 249 222 0 19 chr10 40986626 40986680 -104602608 + (CATATA)n Simple_repeat Simple_repeat 1 53 0 472 191 42 1 chr10 40986731 40986847 -104602441 - L1ME LINE L1 -452 5718 5598 2739 169 12 46 chr10 40986856 40987785 -104601503 - L1M3 LINE L1 -374 6045 5151 1187 118 0 0 chr10 40987785 40987946 -104601342 - AluSg/x SINE Alu -12 298 138 7222 199 84 96 chr10 40987947 40989073 -104600215 - L1M3 LINE L1 -1226 5156 4018 2069 144 0 22 chr10 40989073 40989386 -104599902 - AluSx SINE Alu -6 306 1 7222 199 84 96 chr10 40989386 40990068 -104599220 - L1M3 LINE L1 -2364 4018 3330 2071 161 0 0 chr10 40990068 40990379 -104598909 - AluSx SINE Alu -1 311 1 7222 199 84 96 chr10 40990379 40991284 -104598004 - L1M3 LINE L1 -3052 3330 2416 14598 143 39 30 chr10 40991284 40992227 -104597061 + Tigger2 DNA MER2_type 1 934 -1784 196 51 26 26 chr10 40992227 40992266 -104597022 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 14598 143 39 30 chr10 40992266 40992354 -104596934 + Tigger2 DNA MER2_type 934 1020 -1698 1748 169 6 44 chr10 40992354 40992674 -104596614 + AluJb SINE Alu 1 308 -4 14598 143 39 30 chr10 40992674 40992760 -104596528 + Tigger2 DNA MER2_type 1020 1104 -1614 2092 134 0 3 chr10 40992760 40993058 -104596230 + AluJb SINE Alu 6 302 -10 14598 143 39 30 chr10 40993058 40994631 -104594657 + Tigger2 DNA MER2_type 1104 2718 0 7222 199 84 96 chr10 40994631 40995855 -104593433 - L1M3 LINE L1 -3966 2416 1297 2172 113 10 16 chr10 40995855 40996165 -104593123 - AluSx SINE Alu -4 308 1 7222 199 84 96 chr10 40996165 40997293 -104591995 - L1M3 LINE L1 -5085 1297 157 2913 249 48 19 chr10 40997283 40998155 -104591133 - L1M4b LINE L1 -5873 986 90 * 21 0 0 0 chr10 40998168 40998189 -104591099 + AT_rich Low_complexity Low_complexity 1 21 0 2386 82 0 19 chr10 40998700 40999017 -104590271 - AluY SINE Alu 0 311 1 401 230 0 0 chr10 41001842 41001916 -104587372 - L1M4b LINE L1 -6775 84 11 234 226 65 16 chr10 41001925 41001987 -104587301 + L2 LINE L2 3167 3231 -82 596 297 43 5 chr10 41002066 41002251 -104587037 - MIR SINE MIR -70 192 1 28 29 0 0 chr10 41003360 41003395 -104585893 + AT_rich Low_complexity Low_complexity 1 35 0 1452 140 9 0 chr10 41003452 41003680 -104585608 + MER30 DNA MER1_type 1 230 0 2512 81 0 0 chr10 41003855 41004164 -104585124 + AluSc SINE Alu 1 309 0 2176 136 0 0 chr10 41004364 41004673 -104584615 - AluSx SINE Alu -1 311 3 1281 223 130 30 chr10 41004784 41005246 -104584042 - MLT2B2 LTR ERVL -7 508 1 2402 76 0 22 chr10 41005475 41005789 -104583499 - AluY SINE Alu -4 307 1 1850 179 0 7 chr10 41006241 41006542 -104582746 - AluJb SINE Alu -13 299 1 236 250 46 40 chr10 41006741 41006893 -104582395 + L1ME LINE L1 5671 5823 -298 226 300 73 0 chr10 41008858 41008968 -104580320 - MER112 DNA MER1_type -45 215 98 302 209 229 46 chr10 41009014 41009167 -104580121 + L2 LINE L2 2964 3144 -169 435 270 135 30 chr10 41010019 41010219 -104579069 + LTR33 LTR ERVL 301 521 0 280 273 0 0 chr10 41011403 41011412 -104577876 + (TA)n Simple_repeat Simple_repeat 1 9 -68 1789 160 117 10 chr10 41011412 41011805 -104577483 + MER63B DNA MER1_type 1 435 -1 280 273 0 0 chr10 41011805 41011872 -104577416 + (TA)n Simple_repeat Simple_repeat 8 77 0 197 65 32 0 chr10 41014950 41014981 -104574307 + (TAA)n Simple_repeat Simple_repeat 1 32 0 180 111 0 0 chr10 41015828 41015855 -104573433 + (GAAAA)n Simple_repeat Simple_repeat 4 30 0 181 292 69 0 chr10 41016183 41016255 -104573033 + L2 LINE L2 2008 2084 -1230 223 271 7 21 chr10 41016394 41016479 -104572809 + GA-rich Low_complexity Low_complexity 2 138 0 491 268 0 0 chr10 41016481 41016593 -104572695 + MER58C DNA MER1_type 104 215 0 1520 297 89 30 chr10 41016593 41017503 -104571785 + L2 LINE L2 2176 3150 -163 354 143 0 0 chr10 41017547 41017610 -104571678 + (CA)n Simple_repeat Simple_repeat 2 64 0 2087 114 0 4 chr10 41017902 41018214 -104571074 - AluSc SINE Alu 0 311 1 303 348 9 17 chr10 41019066 41019181 -104570107 - L2 LINE L2 -23 3249 3136 281 295 0 13 chr10 41019542 41019691 -104569597 + L1MC/D LINE L1 979 1125 -5247 1767 256 46 5 chr10 41019709 41020150 -104569138 + MER68 LTR ERV1 1 532 -73 385 200 12 12 chr10 41020153 41020233 -104569055 + L1MC3 LINE L1 6669 6748 -1037 291 93 0 0 chr10 41020302 41020345 -104568943 + (CA)n Simple_repeat Simple_repeat 2 44 0 296 267 0 0 chr10 41020347 41020433 -104568855 + L1MC/D LINE L1 1041 1126 -5258 * 1670 231 54 32 chr10 41020411 41020999 -104568289 + L1MC/D LINE L1 2654 3254 -3128 1472 208 57 6 chr10 41020972 41021428 -104567860 + L1MC/D LINE L1 5356 5841 -743 * 1168 131 17 0 chr10 41021432 41021608 -104567680 + AluSg/x SINE Alu 131 309 -3 794 178 89 23 chr10 41021608 41021822 -104567466 + L1MC3 LINE L1 6756 6983 -802 3950 141 108 9 chr10 41022251 41023008 -104566280 + L1MC3 LINE L1 6945 7776 -9 1311 278 96 65 chr10 41023054 41023957 -104565331 + L1M4 LINE L1 3 933 -5609 2070 92 75 20 chr10 41023962 41024255 -104565033 + AluSc SINE Alu 1 309 0 1752 247 91 23 chr10 41024255 41024938 -104564350 + L1M4 LINE L1 981 1709 -4833 1779 226 193 26 chr10 41024959 41025683 -104563605 + L1M4 LINE L1 1803 2647 -3999 372 136 34 51 chr10 41025686 41025804 -104563484 + CT-rich Low_complexity Low_complexity 5 120 0 1653 179 13 22 chr10 41025806 41026119 -104563169 - AluJb SINE Alu -2 310 1 341 152 0 15 chr10 41026121 41026187 -104563101 + L1M4 LINE L1 2642 2706 -3940 370 303 130 30 chr10 41026307 41026538 -104562750 + L1MEc LINE L1 1541 1794 -4602 325 222 74 22 chr10 41026649 41026784 -104562504 + L1ME LINE L1 5430 5571 -591 1249 229 8 16 chr10 41026790 41027048 -104562240 + LTR39 LTR ERV1 528 783 0 546 200 246 73 chr10 41027050 41027153 -104562135 + L1MC5 LINE L1 7144 7228 -733 1546 181 9 48 chr10 41027153 41027468 -104561820 + AluJo SINE Alu 1 303 -9 546 200 246 73 chr10 41027468 41027828 -104561460 + L1MC5 LINE L1 7228 7687 -274 910 166 57 0 chr10 41027852 41028009 -104561279 - AluSg/x SINE Alu -27 283 118 517 136 12 0 chr10 41028009 41028090 -104561198 - AluS SINE Alu -6 305 224 783 235 47 13 chr10 41028218 41028452 -104560836 + L1MC4 LINE L1 7742 7983 -59 516 224 128 32 chr10 41028486 41028705 -104560583 + L1MC5 LINE L1 7692 7931 -30 1950 125 7 26 chr10 41028790 41029095 -104560193 + AluSx SINE Alu 1 299 -13 2120 113 3 13 chr10 41029103 41029405 -104559883 + AluSx SINE Alu 1 299 -13 285 318 75 16 chr10 41029698 41029953 -104559335 + HAL1 LINE L1 811 1080 -1427 857 214 22 56 chr10 41029954 41030132 -104559156 + FRAM SINE Alu 1 172 -4 2080 91 7 20 chr10 41030201 41030498 -104558790 + AluY SINE Alu 1 293 -18 2120 127 0 7 chr10 41030592 41030884 -104558404 + AluSg SINE Alu 1 290 -20 2313 227 41 34 chr10 41031197 41031905 -104557383 + L1MD2 LINE L1 4590 5302 -844 3215 129 42 2 chr10 41031911 41032419 -104556869 + MER34B LTR ERV1 1 510 -55 1585 171 91 86 chr10 41032456 41032767 -104556521 + L1MD2 LINE L1 5330 5638 -721 2378 88 3 0 chr10 41032767 41033062 -104556226 + AluSp SINE Alu 1 296 -17 1585 171 91 86 chr10 41033062 41033388 -104555900 + L1MD2 LINE L1 5638 6106 -253 316 139 0 0 chr10 41033392 41033435 -104555853 + Alu SINE Alu 240 282 -20 359 149 37 0 chr10 41033439 41033546 -104555742 + (TA)n Simple_repeat Simple_repeat 2 112 0 638 266 119 40 chr10 41033599 41033672 -104555616 + L1MC4a LINE L1 1226 1292 -5104 1995 84 62 7 chr10 41033672 41033946 -104555342 - AluSc SINE Alu -20 289 1 638 266 119 40 chr10 41033946 41034180 -104555108 + L1MC4a LINE L1 1292 1506 -4890 2140 103 0 7 chr10 41034180 41034481 -104554807 - AluSx SINE Alu -13 299 1 638 266 119 40 chr10 41034481 41034871 -104554417 + L1MC4a LINE L1 1506 1979 -4417 279 276 68 45 chr10 41034884 41035148 -104554140 + L1MC4a LINE L1 5041 5310 -905 1158 283 165 9 chr10 41035179 41035706 -104553582 + L1MC4a LINE L1 5365 5973 -1904 257 259 25 12 chr10 41035711 41035792 -104553496 + MER5A DNA MER1_type 28 109 -80 553 214 53 30 chr10 41035976 41036107 -104553181 - MER94 DNA DNA 0 134 1 221 322 58 50 chr10 41037635 41037756 -104551532 + MIR SINE MIR 25 146 -62 225 286 0 0 chr10 41038280 41038343 -104550945 - MIR SINE MIR -81 181 119 384 259 76 15 chr10 41038989 41039120 -104550168 + MIR SINE MIR 111 249 -13 1662 167 60 18 chr10 41039656 41039896 -104549392 - L1MD3 LINE L1 0 7995 7736 6230 63 33 4 chr10 41039896 41040654 -104548634 - LTR17 LTR ERV1 0 780 1 1662 167 60 18 chr10 41040654 41040748 -104548540 - L1MD3 LINE L1 -259 7736 7647 438 151 55 14 chr10 41040760 41040833 -104548455 - AluS SINE Alu -235 77 2 1055 203 37 164 chr10 41040834 41041523 -104547765 + LTR8A LTR ERV1 138 714 -13 836 148 93 38 chr10 41041533 41041666 -104547622 - L1MD3 LINE L1 -402 7593 7446 1053 210 132 88 chr10 41041666 41042052 -104547236 + MER57A LTR ERV1 1 403 0 836 148 93 38 chr10 41042052 41042101 -104547187 - L1MD3 LINE L1 -549 7446 7401 374 191 225 0 chr10 41042111 41042200 -104547088 - MLT1F1 LTR MaLR -458 109 1 579 197 98 0 chr10 41042201 41042333 -104546955 - L1MC4a LINE L1 -581 7227 7083 258 180 40 0 chr10 41042337 41042387 -104546901 - MER4A LTR ERV1 0 664 613 804 167 92 46 chr10 41042390 41042564 -104546724 + AluSg1 SINE Alu 2 183 -126 997 133 0 78 chr10 41042564 41042744 -104546544 - MER4A LTR ERV1 -102 562 397 1990 134 0 3 chr10 41042744 41043060 -104546228 - AluSq SINE Alu 0 315 1 1289 197 38 84 chr10 41043068 41043347 -104545941 - L1M4 LINE L1 -945 5201 4947 2355 85 20 0 chr10 41043347 41043653 -104545635 - AluSq SINE Alu -1 312 1 1289 197 38 84 chr10 41043653 41043800 -104545488 - L1M4 LINE L1 -1199 4947 4795 1640 183 114 17 chr10 41043801 41044114 -104545174 + MSTD LTR MaLR 1 355 -41 2348 163 58 15 chr10 41044114 41044524 -104544764 + MSTA LTR MaLR 1 428 0 1640 183 114 17 chr10 41044524 41044571 -104544717 + MSTD LTR MaLR 355 396 0 2127 209 22 15 chr10 41044577 41044998 -104544290 + MSTD-int LTR MaLR 5 431 -1304 1588 115 0 41 chr10 41044998 41045241 -104544047 - AluSq SINE Alu -15 298 66 2127 209 22 15 chr10 41045241 41045278 -104544010 + MSTD-int LTR MaLR 431 466 -1269 2315 108 0 0 chr10 41045280 41045576 -104543712 - AluSx SINE Alu -16 296 1 2440 92 0 3 chr10 41045576 41045882 -104543406 - AluSg SINE Alu -5 305 1 654 215 96 28 chr10 41046064 41046336 -104542952 + MLT2D LTR ERVL 1 341 -73 694 109 10 0 chr10 41046663 41046757 -104542531 + MSTA LTR MaLR 3 97 -331 2387 43 43 70 chr10 41046757 41047102 -104542186 + LTR2B LTR ERV1 1 336 -154 266 231 77 22 chr10 41047602 41047693 -104541595 - MIR SINE MIR -88 120 25 290 256 427 0 chr10 41048445 41048562 -104540726 - MER5A DNA MER1_type 0 189 23 218 152 0 22 chr10 41048611 41048657 -104540631 + (TA)n Simple_repeat Simple_repeat 2 46 0 245 191 67 56 chr10 41048676 41048765 -104540523 - L1MC4 LINE L1 -1342 6700 6611 2255 102 0 10 chr10 41048950 41049263 -104540025 - AluSg SINE Alu 0 310 1 1401 181 40 0 chr10 41049689 41049966 -104539322 - L1MB5 LINE L1 -8 6664 6377 840 152 94 53 chr10 41049966 41050129 -104539159 - AluJo SINE Alu -15 297 125 4601 189 50 17 chr10 41050134 41051673 -104537615 - L1MB5 LINE L1 -291 6381 4780 2371 104 0 0 chr10 41051673 41051982 -104537306 - AluSc SINE Alu 0 309 1 4601 189 50 17 chr10 41051982 41052082 -104537206 - L1MB5 LINE L1 -1892 4780 4685 767 226 77 39 chr10 41052084 41052318 -104536970 - L1MB5 LINE L1 -5849 693 451 1828 166 12 98 chr10 41052502 41052664 -104536624 + MLT1B LTR MaLR 1 175 -215 2221 150 132 11 chr10 41052664 41053043 -104536245 - MSTA LTR MaLR -3 425 1 1828 166 12 98 chr10 41053043 41053307 -104535981 + MLT1B LTR MaLR 175 390 0 536 286 78 10 chr10 41053313 41053519 -104535769 - L1MB5 LINE L1 -6316 226 7 1959 168 124 24 chr10 41053714 41054173 -104535115 - MLT1D LTR MaLR 0 505 1 298 268 183 0 chr10 41054381 41054523 -104534765 - L1ME LINE L1 -304 5858 5691 1717 146 14 22 chr10 41054555 41054830 -104534458 + AluJo SINE Alu 1 273 -39 253 263 82 82 chr10 41054867 41054906 -104534382 - L1ME LINE L1 -565 5556 5518 2479 79 0 0 chr10 41054906 41055210 -104534078 - AluY SINE Alu -7 304 1 253 263 82 82 chr10 41055210 41055341 -104533947 - L1ME LINE L1 -602 5519 5386 2378 78 3 0 chr10 41055445 41055741 -104533547 - AluSp SINE Alu -15 298 2 180 0 0 0 chr10 41055741 41055761 -104533527 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1942 131 0 17 chr10 41055761 41055914 -104533374 - AluSx SINE Alu -26 286 139 1890 113 0 55 chr10 41055914 41056207 -104533081 - AluSq SINE Alu -14 299 23 1942 131 0 17 chr10 41056207 41056344 -104532944 - AluSx SINE Alu -173 139 1 1260 300 89 43 chr10 41056390 41057118 -104532170 - L1MC4a LINE L1 -1352 7251 6463 2197 104 10 16 chr10 41057118 41057427 -104531861 - AluSx SINE Alu -5 307 1 1260 300 89 43 chr10 41057427 41057700 -104531588 - L1MC4a LINE L1 -2140 6463 6204 2072 108 0 40 chr10 41057725 41057908 -104531380 - AluSx SINE Alu 0 308 119 189 0 0 0 chr10 41057908 41057929 -104531359 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2034 120 3 11 chr10 41057929 41058213 -104531075 - AluSg SINE Alu -28 282 1 2072 108 0 40 chr10 41058213 41058348 -104530940 - AluSx SINE Alu -187 121 1 1690 197 3 7 chr10 41058523 41058822 -104530466 + AluJo SINE Alu 1 298 -14 243 254 30 15 chr10 41058948 41059015 -104530273 + MER5B DNA MER1_type 1 68 -110 252 162 15 73 chr10 41059043 41059111 -104530177 - L1MC4 LINE L1 -504 7538 7475 2205 123 0 0 chr10 41059111 41059412 -104529876 - AluSg SINE Alu -9 301 1 941 278 71 22 chr10 41059587 41060242 -104529046 - L1MC4a LINE L1 -745 6214 5524 1323 210 241 22 chr10 41060248 41060535 -104528753 - MLT1E1 LTR MaLR 0 654 431 2361 77 0 0 chr10 41060535 41060821 -104528467 - AluSg SINE Alu -24 286 1 1323 210 241 22 chr10 41060821 41060994 -104528294 - MLT1E1 LTR MaLR -223 431 93 24 32 0 0 chr10 41061114 41061145 -104528143 + AT_rich Low_complexity Low_complexity 1 31 0 207 0 0 0 chr10 41061157 41061180 -104528108 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 848 156 0 14 chr10 41061188 41061329 -104527959 - AluSg/x SINE Alu -37 273 135 2033 95 53 0 chr10 41061376 41061659 -104527629 - AluSg SINE Alu -12 298 1 1081 254 45 89 chr10 41061659 41061938 -104527350 - L1MC4a LINE L1 -1476 5465 5175 2399 87 0 0 chr10 41061938 41062237 -104527051 - AluY SINE Alu -12 299 1 1081 254 45 89 chr10 41062237 41062313 -104526975 - L1MC4a LINE L1 -1766 5175 5097 2295 103 7 0 chr10 41062313 41062614 -104526674 - AluSp SINE Alu -10 303 1 1081 254 45 89 chr10 41062614 41062627 -104526661 - L1MC4a LINE L1 -1844 5097 5085 2158 113 0 0 chr10 41062627 41062927 -104526361 - AluY SINE Alu -11 300 1 1081 254 45 89 chr10 41062927 41063118 -104526170 - L1MC4a LINE L1 -1856 5085 4929 2470 80 3 0 chr10 41063436 41063736 -104525552 + AluSp SINE Alu 1 301 -12 2277 99 7 3 chr10 41064986 41065289 -104523999 + AluSx SINE Alu 1 304 -8 2037 290 97 33 chr10 41065310 41065984 -104523304 - L2 LINE L2 -31 3282 2653 2185 117 0 7 chr10 41065984 41066282 -104523006 + AluSx SINE Alu 1 296 -16 2037 290 97 33 chr10 41066282 41066829 -104522459 - L2 LINE L2 -660 2653 1982 1981 143 7 3 chr10 41067976 41068270 -104521018 + AluSx SINE Alu 1 295 -17 246 321 99 43 chr10 41068345 41068719 -104520569 + HAL1b LINE L1 78 472 -876 774 231 140 24 chr10 41069201 41069468 -104519820 - L1MC4a LINE L1 -3598 3343 3030 2285 103 3 3 chr10 41069468 41069768 -104519520 - AluSg SINE Alu -10 300 1 774 231 140 24 chr10 41069768 41069829 -104519459 - L1MC4a LINE L1 -3911 3030 2977 787 127 0 0 chr10 41069830 41069940 -104519348 - AluSx SINE Alu -9 303 194 1041 135 0 0 chr10 41069941 41070082 -104519206 - AluSx SINE Alu -171 141 1 263 269 90 6 chr10 41070087 41070254 -104519034 - L1MC4a LINE L1 -4102 3020 2840 1290 142 49 0 chr10 41070275 41070479 -104518809 + Tigger4(Zombi) DNA MER2_type 1 214 -2517 2166 127 132 5 chr10 41070519 41070890 -104518398 - MSTA LTR MaLR -10 418 1 544 78 0 165 chr10 41070927 41071030 -104518258 + Tigger4(Zombi) DNA MER2_type 2646 2731 0 429 232 16 24 chr10 41071034 41071159 -104518129 - L1MC4a LINE L1 -4306 2816 2693 1144 189 59 8 chr10 41071197 41071435 -104517853 - AluJb SINE Alu -9 303 54 1027 255 124 39 chr10 41071441 41072013 -104517275 - L1MC4a LINE L1 -4455 2667 2047 653 256 110 0 chr10 41072102 41072293 -104516995 - L1MC4a LINE L1 -5381 1042 831 416 240 0 3 chr10 41072307 41072414 -104516874 - MER2 DNA MER2_type -133 106 1 2200 108 0 3 chr10 41073863 41074149 -104515139 + AluSx SINE Alu 5 289 -23 2125 119 3 0 chr10 41074149 41074444 -104514844 + AluSx SINE Alu 1 296 -16 25 0 0 0 chr10 41074481 41074506 -104514782 + AT_rich Low_complexity Low_complexity 1 25 0 2300 107 7 0 chr10 41074640 41074950 -104514338 - AluSp SINE Alu -1 312 1 38 39 0 0 chr10 41075034 41075086 -104514202 + AT_rich Low_complexity Low_complexity 1 52 0 43157 36 24 2 chr10 41077772 41083790 -104505498 + L1PA2 LINE L1 2 6154 -1 2234 221 62 94 chr10 41085371 41085438 -104503850 - L1ME2 LINE L1 0 6164 6096 1971 152 52 33 chr10 41085438 41085806 -104503482 + THE1C LTR MaLR 1 375 0 2234 221 62 94 chr10 41085806 41085863 -104503425 - L1ME2 LINE L1 -68 6096 6039 7636 41 10 5 chr10 41085863 41086745 -104502543 + L1PA6 LINE L1 5262 6148 -6 2234 221 62 94 chr10 41086745 41086859 -104502429 - L1ME2 LINE L1 -125 6039 5923 665 140 149 0 chr10 41086859 41086973 -104502315 - FLAM_C SINE Alu -2 131 1 2234 221 62 94 chr10 41086973 41087220 -104502068 - L1ME2 LINE L1 -241 5923 5670 1987 170 66 47 chr10 41087220 41087644 -104501644 + MSTB1 LTR MaLR 1 432 0 2234 221 62 94 chr10 41087644 41088092 -104501196 - L1ME2 LINE L1 -494 5670 5258 1034 150 0 6 chr10 41088112 41088272 -104501016 - AluSp SINE Alu -5 308 150 1817 230 66 78 chr10 41088409 41088633 -104500655 - L1ME2 LINE L1 -1142 5004 4779 2159 138 14 46 chr10 41088633 41088981 -104500307 + MER1B DNA MER1_type 1 337 0 1817 230 66 78 chr10 41088981 41089097 -104500191 - L1ME2 LINE L1 -1367 4779 4663 2269 105 0 0 chr10 41089097 41089392 -104499896 - AluSx SINE Alu -16 296 2 1817 230 66 78 chr10 41089392 41089836 -104499452 - L1ME2 LINE L1 -1483 4663 4228 5070 137 33 35 chr10 41089837 41090350 -104498938 - Tigger3b DNA MER2_type -1798 1230 717 2175 117 7 0 chr10 41090350 41090648 -104498640 - AluSq SINE Alu -13 300 1 5070 137 33 35 chr10 41090648 41090784 -104498504 - Tigger3b DNA MER2_type -2311 717 582 1776 156 17 13 chr10 41090784 41091085 -104498203 - AluJb SINE Alu -10 302 1 5070 137 33 35 chr10 41091085 41091345 -104497943 - Tigger3b DNA MER2_type -2446 582 322 2232 178 52 24 chr10 41091345 41091766 -104497522 - Tigger2a DNA MER2_type -1 433 1 4292 196 45 19 chr10 41091766 41092395 -104496893 - L1MA9 LINE L1 -44 7289 6678 2207 100 24 0 chr10 41092395 41092686 -104496602 - AluSp SINE Alu -15 298 1 4292 196 45 19 chr10 41092686 41093498 -104495790 - L1MA9 LINE L1 -655 6678 5813 1558 222 45 26 chr10 41093506 41093884 -104495404 - L1MA9 LINE L1 -6781 387 3 2121 233 91 6 chr10 41093897 41093926 -104495362 - L1MDb LINE L1 -5308 1098 1073 2122 106 0 3 chr10 41093926 41094208 -104495080 - AluSx SINE Alu -31 281 1 2121 233 91 6 chr10 41094208 41095086 -104494202 - L1MDb LINE L1 -5333 1073 4 896 247 112 55 chr10 41095062 41095316 -104493972 - L1MEc LINE L1 -4172 2415 2177 * 2270 97 0 13 chr10 41095316 41095614 -104493674 - AluSx SINE Alu -18 294 1 896 247 112 55 chr10 41095614 41095685 -104493603 - L1MEc LINE L1 -4410 2177 2111 1905 93 90 0 chr10 41095685 41095953 -104493335 - AluSc SINE Alu -17 292 1 896 247 112 55 chr10 41095953 41096370 -104492918 - L1MEc LINE L1 -4476 2111 1630 2017 138 0 24 chr10 41096395 41096693 -104492595 - AluSx SINE Alu -21 291 1 752 183 73 74 chr10 41096930 41097116 -104492172 - L1MC4 LINE L1 -7 8035 7850 1639 181 24 7 chr10 41097116 41097408 -104491880 + AluJb SINE Alu 1 297 -15 752 183 73 74 chr10 41097408 41097447 -104491841 - L1MC4 LINE L1 -192 7850 7541 * 1585 214 69 18 chr10 41097441 41097834 -104491454 - L1MB7 LINE L1 -155 6029 5617 2239 159 151 75 chr10 41097852 41098485 -104490803 - LTR25 LTR ERV1 0 794 62 2163 118 0 10 chr10 41098485 41098789 -104490499 + AluSx SINE Alu 1 301 -11 2239 159 151 75 chr10 41098789 41098816 -104490472 - LTR25 LTR ERV1 -732 62 38 437 113 0 0 chr10 41098836 41098898 -104490390 - L1MB7 LINE L1 -561 5619 5558 * 1113 216 50 11 chr10 41098890 41099173 -104490115 + L1MC/D LINE L1 590 883 -5162 2973 186 104 42 chr10 41099235 41100294 -104488994 + L1MC/D LINE L1 894 2109 -4455 622 203 27 59 chr10 41100305 41100385 -104488903 + L1MC/D LINE L1 2179 2260 -4304 2989 83 11 5 chr10 41100385 41100758 -104488530 - THE1C LTR MaLR 0 375 1 622 203 27 59 chr10 41100758 41100864 -104488424 + L1MC/D LINE L1 2260 2359 -4205 1544 159 41 12 chr10 41100898 41101265 -104488023 + L1MC/D LINE L1 5612 5985 -743 1997 130 58 0 chr10 41101269 41101561 -104487727 + AluSx SINE Alu 1 309 -3 4173 158 60 15 chr10 41101594 41101657 -104487631 + L1P4 LINE L1 4351 4410 -1755 2069 107 4 7 chr10 41101657 41101970 -104487318 + AluSg SINE Alu 1 312 0 4173 158 60 15 chr10 41101970 41103174 -104486114 + L1P4 LINE L1 4410 5688 -477 * 6427 176 14 5 chr10 41103160 41103701 -104485587 + L1MB1 LINE L1 4083 4618 -1528 2324 100 7 0 chr10 41103701 41104011 -104485277 + AluSx SINE Alu 1 312 0 6427 176 14 5 chr10 41104011 41104643 -104484645 + L1MB1 LINE L1 4618 5266 -880 2190 114 0 3 chr10 41104647 41104944 -104484344 + AluSg SINE Alu 1 296 -14 1828 68 25 0 chr10 41104945 41105182 -104484106 + L1MA1 LINE L1 6059 6301 -1 2875 150 35 33 chr10 41105182 41105549 -104483739 + L1PA15 LINE L1 5643 6034 -131 2247 115 0 3 chr10 41105549 41105853 -104483435 + AluSx SINE Alu 2 304 -8 2875 150 35 33 chr10 41105853 41105983 -104483305 + L1PA15 LINE L1 6034 6162 -3 2360 233 106 7 chr10 41105984 41106685 -104482603 + L1M4 LINE L1 2110 2879 -3267 * 4269 164 25 13 chr10 41106684 41107214 -104482074 + L1MB1 LINE L1 5392 5914 -254 885 170 110 60 chr10 41107214 41107414 -104481874 - MER6B DNA MER2_type 0 210 1 4269 164 25 13 chr10 41107414 41107603 -104481685 + L1MB1 LINE L1 5914 6123 -45 2359 85 3 0 chr10 41107603 41107898 -104481390 + AluSg SINE Alu 1 296 -14 4269 164 25 13 chr10 41107898 41107945 -104481343 + L1MB1 LINE L1 6123 6168 0 2282 104 0 3 chr10 41108031 41108330 -104480958 + AluSq SINE Alu 2 299 -14 251 270 130 0 chr10 41108349 41108464 -104480824 + L1M4 LINE L1 2857 2986 -3160 824 272 51 12 chr10 41108468 41108799 -104480489 - L1ME LINE L1 -4510 1751 1408 495 271 93 16 chr10 41108893 41109151 -104480137 - L1ME LINE L1 -4981 1089 845 491 257 46 0 chr10 41109206 41109315 -104479973 + MER81 DNA DNA 1 114 0 2578 145 14 11 chr10 41109343 41109784 -104479504 - L1MB7 LINE L1 -49 6135 5694 2415 94 0 0 chr10 41109796 41110093 -104479195 - AluY SINE Alu -14 297 1 721 160 33 73 chr10 41110356 41110506 -104478782 + AluJo SINE Alu 82 225 -87 1619 171 79 0 chr10 41110580 41110872 -104478416 - MLT1A1 LTR MaLR -2 363 49 973 336 111 32 chr10 41111003 41111869 -104477419 - ERVL LTR ERVL -1259 4505 3572 2375 104 57 28 chr10 41111913 41112267 -104477021 - THE1B LTR MaLR 0 364 1 1636 185 10 13 chr10 41112297 41112600 -104476688 - AluSx SINE Alu -5 307 6 2230 118 3 0 chr10 41112609 41112905 -104476383 - AluSq SINE Alu -16 297 1 2162 116 0 7 chr10 41112917 41113210 -104476078 - AluSp SINE Alu -22 291 1 1689 179 14 0 chr10 41113216 41113501 -104475787 - AluJb SINE Alu -23 289 1 303 102 0 0 chr10 41113501 41113550 -104475738 - L1MA8 LINE L1 -22 6269 6221 238 217 0 0 chr10 41113540 41113586 -104475702 + L1MC4 LINE L1 6656 6701 -1341 * 1627 140 83 88 chr10 41113579 41113782 -104475506 - L1MA8 LINE L1 -29 6262 6060 1788 92 135 11 chr10 41113782 41114042 -104475246 - AluSg1 SINE Alu -17 292 1 1627 140 83 88 chr10 41114042 41114246 -104475042 - L1MA8 LINE L1 -231 6060 5857 734 352 38 14 chr10 41114614 41115037 -104474251 - ERVL LTR ERVL -2688 3076 2644 2401 175 26 36 chr10 41115628 41116131 -104473157 + LTR6B LTR ERV1 61 558 0 10558 196 24 16 chr10 41116133 41119547 -104469741 + HERVS71 LTR ERV1 4 3597 -5381 29666 186 5 2 chr10 41119554 41124694 -104464594 + HERVS71 LTR ERV1 3721 8909 -69 461 155 36 12 chr10 41124694 41124778 -104464510 + LTR6A LTR ERV1 1 86 -478 1493 227 0 0 chr10 41124796 41125073 -104464215 - HERVS71 LTR ERV1 -730 8248 7972 2088 146 0 0 chr10 41125327 41125622 -104463666 - AluSx SINE Alu -17 295 1 1674 204 101 28 chr10 41125738 41126203 -104463085 + MER74B LTR ERVL 47 545 -77 234 275 0 29 chr10 41126144 41126213 -104463075 - MER88 LTR ERVL -311 153 87 * 2016 138 7 7 chr10 41126293 41126589 -104462699 - AluSx SINE Alu -16 296 1 2356 87 3 7 chr10 41126768 41127067 -104462221 + AluSg SINE Alu 1 298 -12 2273 119 0 0 chr10 41127068 41127371 -104461917 + AluSc SINE Alu 2 304 -5 1962 150 6 22 chr10 41127755 41127928 -104461360 - AluSq SINE Alu -5 308 141 2137 105 14 7 chr10 41127928 41128223 -104461065 - AluSg SINE Alu -13 297 1 1962 150 6 22 chr10 41128223 41128362 -104460926 - AluSq SINE Alu -172 141 1 315 267 135 25 chr10 41128544 41128798 -104460490 - MLT1H LTR MaLR -34 521 204 377 147 56 17 chr10 41128828 41128921 -104460367 - MLT1H LTR MaLR -378 171 32 1536 161 56 0 chr10 41129420 41129669 -104459619 - AluSx SINE Alu -45 267 5 22 0 0 0 chr10 41129731 41129753 -104459535 + AT_rich Low_complexity Low_complexity 1 22 0 1833 160 0 27 chr10 41130066 41130366 -104458922 + AluJb SINE Alu 5 296 -16 1208 201 104 36 chr10 41130942 41131251 -104458037 - MER58B DNA MER1_type -11 330 1 584 240 173 18 chr10 41131411 41131636 -104457652 - MIR SINE MIR -1 261 2 2199 122 0 0 chr10 41135673 41135968 -104453320 + AluSx SINE Alu 1 295 -17 1984 124 13 23 chr10 41136478 41136784 -104452504 - AluSx SINE Alu -9 303 1 341 283 0 0 chr10 41136802 41136894 -104452394 - L2 LINE L2 0 3313 3222 2311 100 7 0 chr10 41137436 41137736 -104451552 + AluSp SINE Alu 1 302 -11 302 305 55 31 chr10 41138506 41138589 -104450699 - L2 LINE L2 -4 3309 3220 1929 161 52 3 chr10 41138589 41138918 -104450370 + MER7A DNA MER2_type 3 345 -1 302 305 55 31 chr10 41138918 41138962 -104450326 - L2 LINE L2 -93 3220 3179 449 200 0 11 chr10 41139443 41139533 -104449755 + AluSg/x SINE Alu 138 226 -83 21 0 0 31 chr10 41139551 41139567 -104449721 + AT_rich Low_complexity Low_complexity 1 16 -15 2003 139 0 3 chr10 41139567 41139855 -104449433 + AluSx SINE Alu 1 287 -25 21 0 0 31 chr10 41139855 41139870 -104449418 + AT_rich Low_complexity Low_complexity 16 31 0 225 311 0 0 chr10 41140296 41140370 -104448918 - L1M4 LINE L1 -3129 3017 2944 * 238 156 22 0 chr10 41140362 41140407 -104448881 - HAL1b LINE L1 -811 537 492 2337 99 0 0 chr10 41140407 41140711 -104448577 - AluSx SINE Alu -8 304 1 1359 106 0 0 chr10 41140713 41140892 -104448396 - AluY SINE Alu -9 302 124 2435 75 0 31 chr10 41141134 41141453 -104447835 + AluY SINE Alu 1 309 -2 345 273 85 12 chr10 41142164 41142329 -104446959 + HAL1 LINE L1 1475 1651 -856 2399 88 3 3 chr10 41142441 41142746 -104446542 + AluSp SINE Alu 1 305 -8 2197 96 3 26 chr10 41142756 41143058 -104446230 + AluSg SINE Alu 1 295 -15 407 250 72 0 chr10 41143229 41143381 -104445907 + L1M4c LINE L1 2937 3099 -3283 747 259 29 38 chr10 41143425 41143741 -104445547 + L1M4c LINE L1 3434 3746 -2636 310 267 17 35 chr10 41143746 41143862 -104445426 + L1MB5 LINE L1 23 136 -6248 1992 137 3 26 chr10 41143893 41144223 -104445065 - AluSx SINE Alu 0 312 1 2713 142 9 34 chr10 41144302 41144496 -104444792 + MSTB LTR MaLR 1 198 -228 2166 137 0 0 chr10 41144496 41144802 -104444486 + AluSx SINE Alu 3 308 -4 2713 142 9 34 chr10 41144802 41145044 -104444244 + MSTB LTR MaLR 198 426 0 6714 183 29 1 chr10 41145044 41146214 -104443074 + MSTB-int LTR MaLR 3 1205 -446 1467 236 56 23 chr10 41146228 41146898 -104442390 + L1MB5 LINE L1 1515 2318 -4064 2119 124 131 31 chr10 41146898 41146938 -104442350 - MSTA LTR MaLR -1 427 392 2072 118 20 10 chr10 41146938 41147234 -104442054 + AluSx SINE Alu 1 299 -13 2119 124 131 31 chr10 41147234 41147581 -104441707 - MSTA LTR MaLR -36 392 1 1467 236 56 23 chr10 41147581 41147863 -104441425 + L1MB5 LINE L1 2318 2589 -3793 * 2977 223 71 19 chr10 41147847 41148215 -104441073 + L1MB5 LINE L1 4723 5070 -1312 1676 180 44 3 chr10 41148215 41148509 -104440779 - AluJb SINE Alu -6 306 1 2977 223 71 19 chr10 41148509 41148876 -104440412 + L1MB5 LINE L1 5070 5417 -965 2019 139 0 0 chr10 41148876 41149157 -104440131 - AluSg SINE Alu -29 281 1 2274 111 3 0 chr10 41149159 41149456 -104439832 - AluSx SINE Alu -14 298 1 2977 223 71 19 chr10 41149456 41149545 -104439743 + L1MB5 LINE L1 5417 5594 -788 1124 229 87 0 chr10 41149547 41149765 -104439523 - MER8 DNA MER2_type 0 239 3 3943 174 51 20 chr10 41149801 41150585 -104438703 + L1MB5 LINE L1 5602 6409 -1 526 299 10 10 chr10 41150587 41150794 -104438494 + L1M4c LINE L1 3728 3934 -2448 653 254 90 11 chr10 41150794 41150983 -104438305 - MER63A DNA MER1_type 0 210 7 1571 236 19 3 chr10 41150989 41151362 -104437926 + L1M4c LINE L1 3934 4312 -2070 207 0 0 0 chr10 41151413 41151436 -104437852 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 429 332 105 9 chr10 41151438 41151703 -104437585 + L2 LINE L2 2777 3063 -250 22 0 0 0 chr10 41151804 41151826 -104437462 + AT_rich Low_complexity Low_complexity 1 22 0 2244 110 3 3 chr10 41151835 41152134 -104437154 + AluSx SINE Alu 1 299 -13 629 308 70 0 chr10 41152154 41152339 -104436949 - Charlie1a DNA MER1_type -1257 198 1 387 0 0 0 chr10 41152432 41152475 -104436813 + (CA)n Simple_repeat Simple_repeat 2 44 0 309 205 79 39 chr10 41152827 41152954 -104436334 + L1ME LINE L1 5716 5847 -274 6320 148 26 9 chr10 41153504 41153687 -104435601 + L1MA4 LINE L1 4146 4324 -1976 2281 101 3 3 chr10 41153687 41153985 -104435303 + AluSp SINE Alu 1 298 -15 6320 148 26 9 chr10 41153985 41154135 -104435153 + L1MA4 LINE L1 4324 4470 -1830 1690 151 79 11 chr10 41154135 41154414 -104434874 + AluSx SINE Alu 1 298 -14 6320 148 26 9 chr10 41154414 41156200 -104433088 + L1MA4 LINE L1 4470 6297 -3 23 33 0 0 chr10 41157329 41157359 -104431929 + GC_rich Low_complexity Low_complexity 1 30 0 1556 186 62 3 chr10 41157983 41158306 -104430982 - MER2 DNA MER2_type -1 343 2 222 297 16 0 chr10 41158401 41158465 -104430823 + (CATA)n Simple_repeat Simple_repeat 1 65 0 2935 185 52 23 chr10 41158484 41159143 -104430145 - MER67C LTR ERV1 0 710 29 2187 114 0 10 chr10 41159143 41159441 -104429847 - AluSg1 SINE Alu -14 295 1 2935 185 52 23 chr10 41159441 41159469 -104429819 - MER67C LTR ERV1 -681 29 3 4542 137 27 21 chr10 41159604 41160378 -104428910 + MER4E LTR ERV1 1 779 0 2203 111 0 0 chr10 41160417 41160706 -104428582 + AluSc SINE Alu 1 289 -20 405 118 108 49 chr10 41160846 41160948 -104428340 + MER54A LTR ERVL 8 115 -786 2304 109 0 3 chr10 41161460 41161762 -104427526 - AluSq SINE Alu -12 301 1 1989 138 3 10 chr10 41161846 41162144 -104427144 - AluSx SINE Alu -16 296 1 1053 216 14 106 chr10 41162144 41162202 -104427086 - L1MC4 LINE L1 -9 8033 7971 1945 146 43 0 chr10 41162202 41162483 -104426805 + AluSg SINE Alu 1 293 -17 1053 216 14 106 chr10 41162483 41162785 -104426503 - L1MC4 LINE L1 -71 7971 7713 1928 145 0 26 chr10 41162785 41163089 -104426199 - AluSc SINE Alu -13 296 1 1053 216 14 106 chr10 41163089 41163144 -104426144 - L1MC4 LINE L1 -329 7713 7655 1080 131 0 0 chr10 41163154 41163299 -104425989 + AluSq/x SINE Alu 1 145 -167 5197 55 132 169 chr10 41163299 41163874 -104425414 - MER11A LTR ERVK -1 1265 670 1316 14 0 0 chr10 41163874 41164018 -104425270 + AluYb8 SINE Alu 172 315 -3 5197 55 132 169 chr10 41164018 41164515 -104424773 - MER11A LTR ERVK -596 670 1 700 181 0 0 chr10 41164537 41164664 -104424624 + AluSg/x SINE Alu 182 308 -4 4063 222 75 38 chr10 41164664 41165404 -104423884 + L1MEc LINE L1 41 752 -5644 2158 112 10 0 chr10 41165404 41165698 -104423590 + AluSx SINE Alu 1 297 -15 4063 222 75 38 chr10 41165698 41165886 -104423402 + L1MEc LINE L1 752 931 -5465 2242 119 0 0 chr10 41165886 41166181 -104423107 - AluSg SINE Alu -15 295 1 4063 222 75 38 chr10 41166181 41166502 -104422786 + L1MEc LINE L1 931 1338 -5058 978 238 34 48 chr10 41166534 41166677 -104422611 + L1MEc LINE L1 2591 2735 -3480 2183 124 3 3 chr10 41166677 41166983 -104422305 + AluSp SINE Alu 1 306 -7 978 238 34 48 chr10 41166983 41167192 -104422096 + L1MEc LINE L1 2735 2938 -3277 388 219 9 9 chr10 41167202 41167316 -104421972 + CT-rich Low_complexity Low_complexity 1 114 0 1455 197 44 7 chr10 41167320 41167615 -104421673 - AluJo SINE Alu -2 310 5 1224 208 62 54 chr10 41167618 41167652 -104421636 + L1MEc LINE L1 2932 2964 -3251 1966 140 7 3 chr10 41167652 41167944 -104421344 + AluSg SINE Alu 1 293 -17 1224 208 62 54 chr10 41167944 41168343 -104420945 + L1MEc LINE L1 2964 3372 -2843 2344 108 0 0 chr10 41168343 41168648 -104420640 + AluSg SINE Alu 6 310 0 1224 208 62 54 chr10 41168648 41168679 -104420609 + L1MEc LINE L1 3372 3401 -2814 1120 90 0 0 chr10 41168685 41168819 -104420469 + AluSq/x SINE Alu 1 134 -179 497 206 10 0 chr10 41168821 41168923 -104420365 + L1MEc LINE L1 4133 4235 -1980 2325 108 13 0 chr10 41168926 41169232 -104420056 + AluSg SINE Alu 1 310 0 1800 134 47 30 chr10 41169248 41169546 -104419742 + AluSx SINE Alu 1 303 -9 317 280 75 0 chr10 41169550 41169657 -104419631 + L1M4b LINE L1 8 122 -6737 2230 111 3 0 chr10 41169669 41169967 -104419321 - AluSp SINE Alu -14 299 1 1293 214 51 11 chr10 41170624 41170899 -104418389 + AluJo SINE Alu 1 286 -26 2163 108 3 0 chr10 41171012 41171322 -104417966 - AluSp SINE Alu 0 311 1 21 0 0 0 chr10 41171325 41171346 -104417942 + AT_rich Low_complexity Low_complexity 1 21 0 1640 164 30 23 chr10 41171649 41171811 -104417477 - AluJb SINE Alu -6 306 140 2015 124 21 3 chr10 41171811 41172102 -104417186 - AluSx SINE Alu -16 296 1 1640 164 30 23 chr10 41172102 41172243 -104417045 - AluJb SINE Alu -172 140 1 1574 80 0 10 chr10 41172320 41172519 -104416769 - MER107 DNA MER1_type 0 197 1 1791 179 67 8 chr10 41172567 41172925 -104416363 - MLT1B LTR MaLR -11 379 1 876 242 64 64 chr10 41173946 41174013 -104415275 - L1MEc LINE L1 -6002 394 328 1914 166 3 3 chr10 41174013 41174321 -104414967 - AluSx SINE Alu -4 308 1 876 242 64 64 chr10 41174321 41174612 -104414676 - L1MEc LINE L1 -6067 329 36 243 277 119 10 chr10 41175423 41175524 -104413764 + MIR SINE MIR 40 151 -57 520 168 196 0 chr10 41175530 41175637 -104413651 + MLT2B2 LTR ERVL 1 128 -387 993 117 94 103 chr10 41175638 41175664 -104413624 + L1PB4 LINE L1 5460 5485 -671 855 99 0 0 chr10 41175664 41175775 -104413513 + HY1 scRNA scRNA 1 111 -1 993 117 94 103 chr10 41175775 41175971 -104413317 + L1PB4 LINE L1 5485 5680 -476 1175 149 0 16 chr10 41175972 41176160 -104413128 + AluSg SINE Alu 1 185 -125 418 103 162 0 chr10 41176161 41176229 -104413059 + AluY SINE Alu 54 132 -179 42708 38 24 4 chr10 41176245 41182253 -104407035 + L1PA2 LINE L1 3 6140 -15 1191 136 0 0 chr10 41182256 41182433 -104406855 + AluSg/x SINE Alu 121 297 -15 1774 173 0 0 chr10 41182435 41182724 -104406564 + AluJo SINE Alu 12 300 -12 2363 200 30 2 chr10 41182725 41183185 -104406103 + L1PB4 LINE L1 5684 6156 0 587 190 37 188 chr10 41183265 41183586 -104405702 + MLT2B1 LTR ERVL 100 480 -40 213 94 0 0 chr10 41183618 41183650 -104405638 + (CA)n Simple_repeat Simple_repeat 2 33 0 1478 175 38 55 chr10 41183825 41184225 -104405063 - HERV15 LTR ERV1 -8340 395 3 638 235 51 77 chr10 41184227 41184659 -104404629 - LTR15 LTR ERV1 0 493 112 671 86 0 0 chr10 41184748 41184829 -104404459 + AluSc SINE Alu 213 293 -16 593 160 50 8 chr10 41184841 41184960 -104404328 - L1MB7 LINE L1 -20 6164 6041 517 290 147 13 chr10 41185105 41185419 -104403869 + LTR50 LTR ERVL 437 792 -3 26 30 0 0 chr10 41185443 41185476 -104403812 + AT_rich Low_complexity Low_complexity 1 33 0 4904 164 15 35 chr10 41185527 41185779 -104403509 + L1MA5 LINE L1 4869 5124 -1176 2041 114 4 4 chr10 41185779 41186097 -104403191 + AluY SINE Alu 1 318 0 1847 131 77 0 chr10 41186107 41186214 -104403074 + AluSc SINE Alu 1 98 -211 351 0 0 0 chr10 41186214 41186253 -104403035 + (CA)n Simple_repeat Simple_repeat 2 40 0 1847 131 77 0 chr10 41186253 41186419 -104402869 + AluSc SINE Alu 98 295 -14 1765 170 3 0 chr10 41186428 41186737 -104402551 + AluJb SINE Alu 1 310 0 4904 164 15 35 chr10 41186737 41187783 -104401505 + L1MA5 LINE L1 5141 6300 0 2388 97 0 3 chr10 41187867 41188177 -104401111 + AluSp SINE Alu 1 309 -4 2144 183 96 30 chr10 41188188 41188657 -104400631 + MLT2B1 LTR ERVL 21 520 0 346 265 20 0 chr10 41188747 41188849 -104400439 + L1ME1 LINE L1 5709 5812 -2183 1910 192 139 22 chr10 41188849 41189339 -104399949 + LTR10B LTR ERV1 1 547 0 1132 238 48 18 chr10 41189339 41189690 -104399598 + L1ME1 LINE L1 5809 6165 -1 2277 106 0 3 chr10 41189737 41190040 -104399248 - AluSc SINE Alu -7 302 1 1620 156 28 21 chr10 41190175 41190463 -104398825 - AluJb SINE Alu -22 290 1 2233 81 34 0 chr10 41192104 41192399 -104396889 + AluSq SINE Alu 1 305 -8 201 239 183 14 chr10 41192466 41192537 -104396751 - MIR SINE MIR -105 103 21 2109 136 0 0 chr10 41193223 41193533 -104395755 - AluSx SINE Alu -2 310 1 2317 95 0 0 chr10 41193916 41194210 -104395078 - AluSc SINE Alu -15 294 1 1772 98 7 102 chr10 41194226 41194531 -104394757 - AluSg SINE Alu -8 302 27 237 305 38 15 chr10 41194594 41194725 -104394563 - L1ME3 LINE L1 -40 6122 5989 469 219 26 123 chr10 41194729 41194837 -104394451 + MER58B DNA MER1_type 201 291 -2129 2008 120 37 0 chr10 41194837 41195137 -104394151 - AluSx SINE Alu -1 311 1 469 219 26 123 chr10 41195137 41195183 -104394105 + MER58B DNA MER1_type 291 340 -1 441 282 201 6 chr10 41195339 41195687 -104393601 - L1M4 LINE L1 -1174 4972 4557 1972 124 43 7 chr10 41195694 41195976 -104393312 - AluSq SINE Alu -21 292 1 1890 114 0 52 chr10 41196114 41196422 -104392866 - AluSq SINE Alu -21 292 1 2041 133 23 0 chr10 41198620 41198922 -104390366 + AluSx SINE Alu 1 309 -3 189 74 0 0 chr10 41198944 41198971 -104390317 + (TATATG)n Simple_repeat Simple_repeat 2 28 0 646 324 108 6 chr10 41198982 41199521 -104389767 - L2 LINE L2 -172 3141 2541 1437 238 114 24 chr10 41199536 41199746 -104389542 + L1M4c LINE L1 1228 1418 -4964 4204 48 2 10 chr10 41199746 41200285 -104389003 - L1PA4 LINE L1 0 6155 5657 1437 238 114 24 chr10 41200285 41200672 -104388616 + L1M4c LINE L1 1418 1998 -4384 1005 209 223 0 chr10 41200677 41201027 -104388261 + L1M4c LINE L1 2034 2461 -3921 4361 111 82 20 chr10 41201031 41201722 -104387566 - L1MA2 LINE L1 0 6304 5571 768 186 6 25 chr10 41201722 41201883 -104387405 - L1M1 LINE L1 -7389 176 19 5927 229 87 65 chr10 41201914 41202223 -104387065 + L1M4c LINE L1 2485 2786 -3596 1506 154 30 0 chr10 41202223 41202456 -104386832 + AluSg SINE Alu 62 301 -9 5927 229 87 65 chr10 41202456 41203176 -104386112 + L1M4c LINE L1 2786 3489 -2893 2174 128 0 3 chr10 41203176 41203480 -104385808 + AluSx SINE Alu 1 303 -9 5927 229 87 65 chr10 41203480 41203746 -104385542 + L1M4c LINE L1 3489 3748 -2634 2100 127 0 7 chr10 41203746 41204045 -104385243 - AluSg SINE Alu -13 297 1 5927 229 87 65 chr10 41204045 41204678 -104384610 + L1M4c LINE L1 3748 4366 -2016 2265 105 23 0 chr10 41204678 41204983 -104384305 + AluSp SINE Alu 1 312 -1 5927 229 87 65 chr10 41204983 41205478 -104383810 + L1M4c LINE L1 4366 4849 -1533 2970 179 62 2 chr10 41205478 41205997 -104383291 + MER44D DNA MER2_type 1 605 0 5927 229 87 65 chr10 41205997 41206121 -104383167 + L1M4c LINE L1 4849 4969 -1413 1475 192 40 51 chr10 41206121 41206496 -104382792 + MLT1A2 LTR MaLR 4 374 0 5927 229 87 65 chr10 41206496 41206563 -104382725 + L1M4c LINE L1 4969 5160 -1222 1951 218 138 7 chr10 41206578 41207115 -104382173 - L1MB4 LINE L1 -2 6676 6070 198 0 0 0 chr10 41207122 41207144 -104382144 + (TAGA)n Simple_repeat Simple_repeat 1 22 0 2160 108 18 0 chr10 41207145 41207431 -104381857 - AluSx SINE Alu -21 291 1 365 204 108 0 chr10 41207438 41207531 -104381757 - L1MB4 LINE L1 -1014 5630 5528 231 174 0 130 chr10 41207532 41207601 -104381687 - L1MB4 LINE L1 -1181 5463 5404 571 240 39 7 chr10 41207605 41207759 -104381529 - L1MB5 LINE L1 -119 6055 5897 854 213 45 5 chr10 41207772 41207974 -104381314 - L1MB4 LINE L1 -1241 5403 5194 204 40 0 0 chr10 41208128 41208153 -104381135 + (TTCA)n Simple_repeat Simple_repeat 3 27 0 1339 192 65 41 chr10 41208157 41208448 -104380840 - AluJb SINE Alu -4 298 1 1550 253 25 38 chr10 41208450 41208809 -104380479 - L1MB4 LINE L1 -3601 3043 2681 1556 159 50 4 chr10 41208809 41209067 -104380221 + AluJo SINE Alu 11 280 -32 222 0 79 0 chr10 41209067 41209105 -104380183 + A-rich Low_complexity Low_complexity 1 41 0 1550 253 25 38 chr10 41209105 41209254 -104380034 - L1MB4 LINE L1 -3962 2682 2533 2047 143 0 13 chr10 41209254 41209568 -104379720 - AluSx SINE Alu 0 312 3 1550 253 25 38 chr10 41209568 41210244 -104379044 - L1MB4 LINE L1 -4111 2533 1764 381 261 114 23 chr10 41210244 41210420 -104378868 - L1MB4 LINE L1 -6336 206 15 309 162 27 14 chr10 41210463 41210537 -104378751 + L1M4 LINE L1 1373 1447 -5412 671 243 73 15 chr10 41210597 41210856 -104378432 + L1M4 LINE L1 1740 2013 -4946 3136 209 79 28 chr10 41210892 41211295 -104377993 + L1MD2 LINE L1 5479 5860 -499 959 247 101 45 chr10 41211295 41211692 -104377596 - LTR52 LTR ERVL -2 419 1 3136 209 79 28 chr10 41211692 41212089 -104377199 + L1MD2 LINE L1 5860 6325 -34 2219 135 0 0 chr10 41212089 41212401 -104376887 + AluJb SINE Alu 1 312 0 3136 209 79 28 chr10 41212401 41212426 -104376862 + L1MD2 LINE L1 6325 6347 -12 2129 93 4 4 chr10 41212484 41212788 -104376500 + AluSc SINE Alu 1 304 0 227 319 83 43 chr10 41212859 41213113 -104376175 + L1M4 LINE L1 4898 5161 -1796 3108 216 28 45 chr10 41213144 41213245 -104376043 - L1MB8 LINE L1 -13 6165 6064 1668 108 62 88 chr10 41213245 41213552 -104375736 - AluSx SINE Alu -13 299 1 2151 111 3 3 chr10 41213560 41213849 -104375439 - AluSx SINE Alu -23 289 1 3108 216 28 45 chr10 41213849 41214513 -104374775 - L1MB8 LINE L1 -121 6057 5403 2217 104 0 3 chr10 41214513 41214812 -104374476 - AluSg1 SINE Alu -11 298 1 3108 216 28 45 chr10 41214812 41214864 -104374424 - L1MB8 LINE L1 -775 5403 5352 2895 184 53 9 chr10 41214885 41215490 -104373798 - L1MC4 LINE L1 -16 8026 7124 2685 176 72 57 chr10 41215505 41215909 -104373379 - L1MC3 LINE L1 -922 6863 6443 2116 145 0 0 chr10 41215909 41216219 -104373069 - AluSx SINE Alu -2 310 1 2685 176 72 57 chr10 41216219 41216497 -104372791 - L1MC3 LINE L1 -1342 6443 6171 2324 256 91 40 chr10 41216507 41216959 -104372329 + L1M4 LINE L1 3383 3810 -2336 1997 145 10 3 chr10 41216959 41217262 -104372026 + AluSx SINE Alu 1 305 -7 2324 256 91 40 chr10 41217262 41217707 -104371581 + L1M4 LINE L1 3810 4326 -1820 * 5203 256 89 26 chr10 41217701 41218123 -104371165 - L1MB8 LINE L1 -808 5338 4944 2049 133 13 7 chr10 41218123 41218425 -104370863 - AluSg SINE Alu -6 304 1 5203 256 89 26 chr10 41218425 41218927 -104370361 - L1MB8 LINE L1 -1202 4944 4475 1447 156 120 18 chr10 41218927 41219203 -104370085 - AluSg SINE Alu -6 304 1 5203 256 89 26 chr10 41219203 41220016 -104369272 - L1MB8 LINE L1 -1671 4475 3715 1881 156 7 16 chr10 41220016 41220324 -104368964 - AluJb SINE Alu -3 309 5 5203 256 89 26 chr10 41220324 41221562 -104367726 - L1MB8 LINE L1 -2431 3715 2169 308 218 0 0 chr10 41221601 41221656 -104367632 + Tigger5 DNA MER2_type 1 55 -2268 229 227 15 15 chr10 41221625 41221691 -104367597 + Tigger5 DNA MER2_type 2251 2316 -7 * 328 185 15 15 chr10 41221758 41221823 -104367465 + Tigger5 DNA MER2_type 2259 2323 0 1025 191 80 0 chr10 41221925 41222124 -104367164 - L1PB4 LINE L1 0 6156 5942 29 47 0 0 chr10 41222129 41222172 -104367116 + AT_rich Low_complexity Low_complexity 1 43 0 391 227 60 117 chr10 41222177 41222380 -104366908 - L1MEc LINE L1 -4305 2091 1878 1377 138 47 30 chr10 41222380 41222612 -104366676 + MER46A DNA MER2_type 1 236 0 391 227 60 117 chr10 41222612 41222643 -104366645 - L1MEc LINE L1 -4518 1878 1847 180 0 0 0 chr10 41222643 41222663 -104366625 + (TTG)n Simple_repeat Simple_repeat 2 21 0 976 144 88 6 chr10 41222665 41222825 -104366463 - L1PA8A LINE L1 -13 6118 5946 391 227 60 117 chr10 41222825 41222970 -104366318 - L1MEc LINE L1 -4550 1846 1730 2113 106 27 3 chr10 41222991 41223283 -104366005 - AluSx SINE Alu -13 299 1 231 222 0 0 chr10 41223289 41223343 -104365945 + T-rich Low_complexity Low_complexity 1 54 0 1567 195 17 23 chr10 41223352 41223654 -104365634 - AluJb SINE Alu -12 300 1 320 328 85 10 chr10 41223654 41223949 -104365339 - L1M4b LINE L1 -4455 2683 2265 2551 47 3 0 chr10 41224011 41224309 -104364979 + L1PA4 LINE L1 5854 6152 -3 186 296 111 25 chr10 41224321 41224402 -104364886 + MIR SINE MIR 78 165 -97 516 192 48 41 chr10 41224489 41224635 -104364653 - L1M4b LINE L1 -4784 2175 2029 491 198 42 0 chr10 41224680 41224776 -104364512 - U6 snRNA snRNA -6 101 2 2424 236 67 13 chr10 41224778 41224996 -104364292 - L1M4b LINE L1 -4954 1901 1696 2204 121 0 6 chr10 41224996 41225311 -104363977 - AluSq SINE Alu 0 313 1 2424 236 67 13 chr10 41225311 41225470 -104363818 - L1M4b LINE L1 -5159 1696 1547 2176 117 13 0 chr10 41225470 41225769 -104363519 - AluSx SINE Alu -9 303 1 2424 236 67 13 chr10 41225769 41226327 -104362961 - L1M4b LINE L1 -5308 1547 936 1643 268 94 13 chr10 41226445 41226987 -104362301 - L1M4b LINE L1 -5927 932 347 3268 269 68 48 chr10 41226987 41227704 -104361584 + L1MEc LINE L1 362 1063 -5333 1657 137 16 73 chr10 41227704 41228018 -104361270 + AluJb SINE Alu 13 308 -4 3268 269 68 48 chr10 41228018 41228149 -104361139 + L1MEc LINE L1 1063 1190 -5206 2420 81 7 0 chr10 41228149 41228456 -104360832 + AluSc SINE Alu 1 309 0 3268 269 68 48 chr10 41228456 41229207 -104360081 + L1MEc LINE L1 1190 1995 -4401 1781 256 79 40 chr10 41229242 41230056 -104359232 + L1MEc LINE L1 2200 3044 -3171 438 190 66 33 chr10 41230113 41230234 -104359054 - L1M4 LINE L1 -2988 3158 3034 276 206 33 76 chr10 41230244 41230428 -104358860 + (TATATG)n Simple_repeat Simple_repeat 4 179 0 1115 268 73 14 chr10 41230449 41231172 -104358116 + L1MEc LINE L1 3101 3936 -2279 833 241 20 30 chr10 41231174 41231377 -104357911 + MER45R DNA AcHobo 4 204 -1377 4437 192 93 40 chr10 41231441 41232641 -104356647 + MER45R DNA AcHobo 318 1581 0 1767 250 67 59 chr10 41232661 41233529 -104355759 + L1MEc LINE L1 3937 4811 -1404 31 26 0 0 chr10 41233770 41233808 -104355480 + AT_rich Low_complexity Low_complexity 1 38 0 1045 229 102 23 chr10 41233958 41234382 -104354906 - MLT1B LTR MaLR 0 390 1 191 35 0 35 chr10 41234979 41235008 -104354280 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 337 258 87 51 chr10 41237736 41237914 -104351374 - L1MD3 LINE L1 -12 7936 6153 243 88 0 0 chr10 41237914 41237948 -104351340 + (TG)n Simple_repeat Simple_repeat 1 34 0 365 262 57 8 chr10 41238333 41238455 -104350833 - Zaphod DNA AcHobo 0 4031 3904 3509 230 111 34 chr10 41238858 41239286 -104350002 + L1M4 LINE L1 3041 3435 -2711 2002 127 0 20 chr10 41239286 41239578 -104349710 + AluSg SINE Alu 1 286 -24 3509 230 111 34 chr10 41239578 41240344 -104348944 + L1M4 LINE L1 3435 4327 -1819 2389 173 69 32 chr10 41240329 41240833 -104348455 + L1MC2 LINE L1 5811 6333 -11 * 1801 262 39 0 chr10 41240995 41241484 -104347804 + LTR53 LTR ERVL 11 518 -1 256 111 0 44 chr10 41242414 41242455 -104346833 + MLT1A1 LTR MaLR 4 42 -386 240 128 106 21 chr10 41242455 41242502 -104346786 + AluSx SINE Alu 1 51 -249 1778 117 24 0 chr10 41242506 41242775 -104346513 + AluSx SINE Alu 27 301 0 907 197 11 115 chr10 41242783 41243156 -104346132 + MLT1A1 LTR MaLR 39 396 0 787 103 0 28 chr10 41243416 41243523 -104345765 + FRAM SINE Alu 54 157 -19 2607 71 0 0 chr10 41243523 41243834 -104345454 + AluY SINE Alu 1 311 0 186 43 0 0 chr10 41245868 41245891 -104343397 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1938 118 7 4 chr10 41245899 41246171 -104343117 - AluSx SINE Alu -39 273 1 1912 112 72 0 chr10 41246515 41246793 -104342495 - AluSq SINE Alu -15 298 1 1743 125 91 8 chr10 41247069 41247353 -104341935 - AluSg1 SINE Alu 0 309 1 2073 146 10 0 chr10 41247454 41247762 -104341526 + AluSx SINE Alu 1 311 -1 979 143 0 0 chr10 41248651 41248798 -104340490 + L1PA16 LINE L1 6011 6157 -9 24 0 0 0 chr10 41250844 41250868 -104338420 + AT_rich Low_complexity Low_complexity 1 24 0 2102 129 0 0 chr10 41250868 41251162 -104338126 - AluSx SINE Alu -18 294 1 231 226 43 0 chr10 41251312 41251366 -104337922 + MER5A DNA MER1_type 41 106 -82 1924 128 3 17 chr10 41251725 41251861 -104337427 + AluSx SINE Alu 1 137 -175 1929 114 8 0 chr10 41251861 41252123 -104337165 + AluSq SINE Alu 39 302 -11 1924 128 3 17 chr10 41252123 41252275 -104337013 + AluSx SINE Alu 137 285 -27 348 24 0 0 chr10 41252293 41252304 -104336984 + (TG)n Simple_repeat Simple_repeat 1 52 0 348 24 0 0 chr10 41252304 41252345 -104336943 + (TG)n Simple_repeat Simple_repeat 2 42 0 459 230 133 12 chr10 41252566 41252731 -104336557 - MLT1C LTR MaLR 0 467 283 3154 112 27 33 chr10 41253971 41254178 -104335110 + MER49 LTR ERV1 1 208 -715 2411 78 3 0 chr10 41254178 41254474 -104334814 + AluY SINE Alu 1 297 -14 3154 112 27 33 chr10 41254474 41254777 -104334511 + MER49 LTR ERV1 208 508 -415 683 218 83 10 chr10 41255047 41255240 -104334048 + L1MC2 LINE L1 6138 6344 0 337 332 80 36 chr10 41255886 41256136 -104333152 + MIR SINE MIR 1 261 -1 250 318 9 36 chr10 41256331 41256441 -104332847 - MIR SINE MIR -61 147 41 2593 162 31 0 chr10 41256715 41257129 -104332159 - MSTA LTR MaLR -1 427 1 9505 165 31 28 chr10 41257129 41258366 -104330922 - MSTA-int LTR MaLR 0 1651 406 1454 192 91 0 chr10 41258366 41258652 -104330636 - AluJb SINE Alu 0 312 1 9505 165 31 28 chr10 41258652 41259060 -104330228 - MSTA-int LTR MaLR -1245 406 1 266 128 0 0 chr10 41259060 41259099 -104330189 - MSTA LTR MaLR 0 428 390 2305 97 0 0 chr10 41259099 41259387 -104329901 + AluSg SINE Alu 1 288 -22 2069 153 114 0 chr10 41259432 41259792 -104329496 - MSTA LTR MaLR -27 401 1 412 138 0 53 chr10 41260051 41260145 -104329143 - LTR49-int LTR ERV1 -2782 3816 3728 613 51 39 13 chr10 41260214 41260292 -104328996 - MADE1 DNA Mariner 0 80 1 502 233 61 28 chr10 41260303 41260483 -104328805 - LTR49-int LTR ERV1 -2868 3730 3545 326 173 12 37 chr10 41260565 41260646 -104328642 - LTR49-int LTR ERV1 -4274 2484 2406 213 39 0 0 chr10 41260677 41260703 -104328585 + (T)n Simple_repeat Simple_repeat 1 26 0 614 166 40 108 chr10 41261699 41261922 -104327366 - LTR49-int LTR ERV1 -2486 3845 3638 299 331 17 6 chr10 41261976 41262151 -104327137 - L1M4 LINE L1 -2396 3750 3574 495 287 96 56 chr10 41262161 41262662 -104326626 - HSATI Satellite Satellite -13 564 44 32 26 0 0 chr10 41262880 41262919 -104326369 + AT_rich Low_complexity Low_complexity 1 39 0 373 141 113 0 chr10 41263147 41263218 -104326070 + MSTD LTR MaLR 316 394 -2 3827 45 5 1 chr10 41263225 41263738 -104325550 + L1PA4 LINE L1 5608 6128 -27 207 0 0 0 chr10 41264173 41264196 -104325092 + (TG)n Simple_repeat Simple_repeat 2 24 0 185 278 42 0 chr10 41264476 41264548 -104324740 + MIR SINE MIR 178 252 -10 600 290 67 9 chr10 41264733 41265236 -104324052 - MLT1G LTR MaLR -29 561 1 1030 145 38 0 chr10 41265272 41265431 -104323857 - L1PA12 LINE L1 -5468 2113 1949 1680 107 25 0 chr10 41265431 41265674 -104323614 + L1PA13 LINE L1 5915 6163 0 5948 117 34 28 chr10 41265932 41265954 -104323334 - MER49 LTR ERV1 -4 919 899 2403 96 0 0 chr10 41265954 41266257 -104323031 + AluSq SINE Alu 1 303 -10 5948 117 34 28 chr10 41266257 41267148 -104322140 - MER49 LTR ERV1 -24 899 1 2429 195 60 39 chr10 41267475 41268120 -104321168 - HERVL68 LTR ERVL -1785 1252 594 293 291 0 58 chr10 41268270 41268356 -104320932 - HERVL68 LTR ERVL -2611 426 346 1584 155 7 69 chr10 41268392 41268683 -104320605 + AluJo SINE Alu 1 273 -39 2044 217 100 14 chr10 41268697 41269221 -104320067 - MER68 LTR ERV1 0 562 11 2050 128 3 13 chr10 41269233 41269537 -104319751 - AluSc SINE Alu -8 301 1 2075 125 7 10 chr10 41269937 41270241 -104319047 + AluSx SINE Alu 1 303 -9 1513 154 135 0 chr10 41271552 41271818 -104317470 + AluSx SINE Alu 1 302 -10 2007 145 0 3 chr10 41273048 41273351 -104315937 + AluSx SINE Alu 1 302 -10 2406 89 0 0 chr10 41273403 41273707 -104315581 + AluSg SINE Alu 1 304 -6 24 0 0 0 chr10 41273926 41273950 -104315338 + AT_rich Low_complexity Low_complexity 1 24 0 1546 127 14 40 chr10 41273957 41274073 -104315215 - L1PB3 LINE L1 -9 6145 6028 2119 124 10 0 chr10 41274073 41274372 -104314916 - AluSq SINE Alu -11 302 1 1546 127 14 40 chr10 41274372 41274530 -104314758 - L1PB3 LINE L1 -126 6028 5878 1846 108 87 17 chr10 41276706 41276994 -104312294 + AluSg SINE Alu 1 308 -2 1207 221 111 3 chr10 41277542 41277849 -104311439 + MER58B DNA MER1_type 2 341 0 2426 82 0 19 chr10 41278099 41278415 -104310873 + AluSg SINE Alu 1 310 0 2778 164 26 56 chr10 41278582 41279204 -104310084 - L1MB5 LINE L1 -6 6168 5566 609 202 85 48 chr10 41279206 41279478 -104309810 - L1MB5 LINE L1 -1475 4671 4390 758 194 31 6 chr10 41279478 41279638 -104309650 + MER58B DNA MER1_type 139 302 -39 843 240 52 0 chr10 41279641 41279928 -104309360 - L1MB5 LINE L1 -1745 4401 4081 4028 189 36 24 chr10 41279951 41280735 -104308553 - L1MB2 LINE L1 -42 6627 5675 8023 72 11 5 chr10 41280735 41281799 -104307489 - MER11C LTR ERVK 0 1071 1 4028 189 36 24 chr10 41281799 41282363 -104306925 - L1MB2 LINE L1 -994 5675 5119 3190 240 62 48 chr10 41282362 41282614 -104306674 - L1MB2 LINE L1 -3706 2938 2691 * 2194 109 0 43 chr10 41282614 41282936 -104306352 - AluSg SINE Alu -2 308 1 3190 240 62 48 chr10 41282936 41285143 -104304145 - L1MB2 LINE L1 -3953 2691 330 1408 210 100 19 chr10 41285350 41285779 -104303509 - L1MC4 LINE L1 -1115 6927 6464 2411 99 3 0 chr10 41285802 41286106 -104303182 - AluSp SINE Alu -8 305 1 594 174 65 14 chr10 41286395 41286533 -104302755 - MLT1A1 LTR MaLR -220 145 1 1175 235 60 22 chr10 41286533 41286950 -104302338 - L1M4 LINE L1 -1729 4915 4483 * 28356 95 9 10 chr10 41286943 41292296 -104296992 + L1PA7 LINE L1 1445 7592 0 397 133 53 0 chr10 41292299 41292374 -104296914 - L1MA3 LINE L1 -195 6110 6032 916 207 64 0 chr10 41292508 41292711 -104296577 - L1M4 LINE L1 -4631 2015 1800 752 64 0 0 chr10 41292716 41292810 -104296478 - AluY SINE Alu -16 295 202 255 223 32 21 chr10 41292828 41292922 -104296366 - L1M4 LINE L1 -5628 914 820 547 270 43 33 chr10 41292959 41293170 -104296118 - L1M4 LINE L1 -5719 823 611 827 68 83 30 chr10 41293174 41293306 -104295982 - MER85 DNA T2_type 0 139 1 710 31 21 0 chr10 41293532 41293628 -104295660 + (TTTTC)n Simple_repeat Simple_repeat 3 100 0 2105 108 7 0 chr10 41293629 41293907 -104295381 - AluSq SINE Alu -33 280 1 1663 147 0 0 chr10 41294007 41294252 -104295036 - AluSx SINE Alu -5 307 63 391 174 35 0 chr10 41294734 41294820 -104294468 + Charlie7 DNA MER1_type 51 139 -2473 28 29 0 0 chr10 41294832 41294867 -104294421 + AT_rich Low_complexity Low_complexity 1 35 0 450 0 0 0 chr10 41295868 41295918 -104293370 + (TG)n Simple_repeat Simple_repeat 2 51 0 300 242 0 78 chr10 41296338 41296466 -104292822 - L1ME3 LINE L1 -55 6107 5990 1449 178 13 80 chr10 41296570 41296884 -104292404 + AluJb SINE Alu 3 295 -17 1963 174 0 0 chr10 41297628 41297915 -104291373 + AluSx SINE Alu 1 287 -25 180 0 0 0 chr10 41297915 41297935 -104291353 + (CCA)n Simple_repeat Simple_repeat 1 20 0 2059 144 20 0 chr10 41300948 41301247 -104288041 + AluSx SINE Alu 1 305 -7 628 231 62 25 chr10 41301837 41302079 -104287209 + L1 LINE L1 3490 3740 -2406 836 240 218 3 chr10 41302385 41302756 -104286532 + L1MC4 LINE L1 6463 6913 -1129 1858 175 7 7 chr10 41302757 41303060 -104286228 + AluJb SINE Alu 1 303 -9 256 145 65 16 chr10 41303060 41303122 -104286166 + L1MC/D LINE L1 5744 5808 -525 * 2873 175 36 2 chr10 41303110 41303723 -104285565 + L1 LINE L1 4610 5243 -903 1331 163 55 4 chr10 41303723 41303980 -104285308 - MSTA LTR MaLR 0 428 159 790 83 16 0 chr10 41303994 41304115 -104285173 + L1MA3 LINE L1 6183 6305 0 558 225 31 8 chr10 41304263 41304392 -104284896 - MSTA LTR MaLR -294 132 1 5887 95 65 7 chr10 41304407 41305401 -104283887 + L1MA3 LINE L1 5254 6305 0 471 196 14 161 chr10 41305826 41306106 -104283182 + L1M4 LINE L1 4999 5237 -909 1241 144 118 146 chr10 41306477 41306551 -104282737 + LOR1a LTR ERV1 1 76 -421 1672 143 156 45 chr10 41306551 41306930 -104282358 - MSTA LTR MaLR -4 424 4 1241 144 118 146 chr10 41306930 41307347 -104281941 + LOR1a LTR ERV1 76 478 -19 2310 90 0 0 chr10 41309564 41309853 -104279435 - AluSg SINE Alu -21 289 1 352 77 0 0 chr10 41310072 41310124 -104279164 + Alu SINE Alu 246 297 -3 535 108 11 0 chr10 41310130 41310223 -104279065 - L1PA15 LINE L1 -1 6164 6071 836 97 8 0 chr10 41310225 41310349 -104278939 - L1PA15 LINE L1 -159 6006 5882 450 46 31 0 chr10 41310363 41310428 -104278860 + MER41A LTR ERV1 400 466 -88 4566 237 54 16 chr10 41310670 41311257 -104278031 - L1MB4 LINE L1 -3 6413 5850 2034 143 0 29 chr10 41311257 41311571 -104277717 - AluSx SINE Alu -7 305 1 4566 237 54 16 chr10 41311571 41313347 -104275941 - L1MB4 LINE L1 -566 5850 3946 1145 171 46 0 chr10 41313347 41313587 -104275701 + Tigger5 DNA MER2_type 2073 2323 0 1039 267 37 23 chr10 41313587 41314104 -104275184 - L1MB4 LINE L1 -3512 2870 2347 4798 58 2 3 chr10 41314116 41314717 -104274571 - L1PA5 LINE L1 -1 6153 5554 6153 112 0 11 chr10 41314717 41315670 -104273618 - L1P LINE L1 -4627 1519 578 4243 237 107 28 chr10 41315665 41315906 -104273382 - L1MB4 LINE L1 -4029 2355 2134 * 2311 104 0 3 chr10 41315906 41316203 -104273085 + AluSc SINE Alu 1 296 -13 4243 237 107 28 chr10 41316203 41316389 -104272899 - L1MB4 LINE L1 -4250 2134 1964 1962 123 70 25 chr10 41316389 41316748 -104272540 - THE1C LTR MaLR 0 375 1 4243 237 107 28 chr10 41316748 41316948 -104272340 - L1MB4 LINE L1 -4420 1964 1781 1905 137 0 36 chr10 41316948 41317255 -104272033 - AluSq SINE Alu -17 296 1 4243 237 107 28 chr10 41317255 41318709 -104270579 - L1MB4 LINE L1 -4603 1781 16 200 317 135 0 chr10 41319618 41319722 -104269566 + MIR3 SINE MIR 63 180 -28 2262 113 0 0 chr10 41320174 41320467 -104268821 - AluSc SINE Alu -16 293 1 1818 234 111 96 chr10 41321029 41321944 -104267344 + L1MD3 LINE L1 6272 7461 -532 548 236 0 0 chr10 41321944 41322067 -104267221 + MLT1F1 LTR MaLR 3 125 -442 1818 234 111 96 chr10 41322067 41322609 -104266679 + L1MD3 LINE L1 7461 7993 0 1818 150 0 0 chr10 41322629 41322896 -104266392 + AluSx SINE Alu 1 267 -45 1094 231 117 2 chr10 41323459 41323871 -104265417 - L1MDa LINE L1 -4112 2428 1970 2112 134 0 10 chr10 41326616 41326923 -104262365 + AluSx SINE Alu 1 304 -8 549 140 32 0 chr10 41327075 41327168 -104262120 - AluSp/q SINE Alu -10 303 208 248 128 26 0 chr10 41327168 41327207 -104262081 - Alu SINE Alu -263 40 1 205 329 63 0 chr10 41327248 41327327 -104261961 - MIR3 SINE MIR -25 183 100 259 239 15 0 chr10 41327352 41327419 -104261869 + Tigger2 DNA MER2_type 3 70 -2648 558 269 11 44 chr10 41327453 41327576 -104261712 - MER8 DNA MER2_type -63 176 59 2077 172 64 40 chr10 41327576 41328075 -104261213 - MER9 LTR ERVK 0 511 1 558 269 11 44 chr10 41328075 41328133 -104261155 - MER8 DNA MER2_type -180 59 1 256 263 88 25 chr10 41328986 41329066 -104260222 - MIR3 SINE MIR -46 162 78 2081 154 0 0 chr10 41329641 41329939 -104259349 - AluSx SINE Alu -14 298 1 401 333 42 48 chr10 41330168 41330373 -104258915 + L2 LINE L2 2946 3150 -163 2290 88 0 16 chr10 41330373 41330678 -104258610 - AluY SINE Alu -9 302 3 401 333 42 48 chr10 41330678 41330802 -104258486 + L2 LINE L2 3150 3273 -40 997 177 60 41 chr10 41331354 41331620 -104257668 - MER92B LTR ERV1 -365 271 1 2155 118 0 3 chr10 41332031 41332374 -104256914 - AluSq SINE Alu 0 313 1 1719 200 7 0 chr10 41332488 41332798 -104256490 - AluSx SINE Alu 0 312 1 1382 97 0 78 chr10 41332946 41333152 -104256136 - AluSp SINE Alu -123 190 1 23 0 0 0 chr10 41333333 41333356 -104255932 + AT_rich Low_complexity Low_complexity 1 23 0 906 206 0 0 chr10 41333662 41333837 -104255451 + AluJb SINE Alu 137 311 -1 195 286 0 0 chr10 41335218 41335323 -104253965 + (TG)n Simple_repeat Simple_repeat 2 106 0 2369 89 0 6 chr10 41336013 41336327 -104252961 - AluSq SINE Alu 0 313 2 908 290 73 62 chr10 41336335 41337046 -104252242 + L1M4 LINE L1 3064 3782 -2364 423 286 32 7 chr10 41338716 41338870 -104250418 + MER58B DNA MER1_type 177 334 -7 1806 221 100 77 chr10 41339555 41340442 -104248846 - L1MC4a LINE L1 -1 7807 6900 1791 75 12 181 chr10 41340448 41340862 -104248426 - LTR14A LTR ERVK 0 344 1 1967 213 49 81 chr10 41340865 41341362 -104247926 - L1MC4a LINE L1 -909 6899 6428 216 0 0 0 chr10 41341362 41341386 -104247902 + (TG)n Simple_repeat Simple_repeat 2 25 0 1967 213 49 81 chr10 41341386 41341564 -104247724 - L1MC4a LINE L1 -1380 6428 6246 328 188 11 125 chr10 41341587 41341763 -104247525 - L1MC4a LINE L1 -1794 6014 5859 2309 116 0 3 chr10 41341923 41342234 -104247054 - AluSx SINE Alu -2 310 1 1595 143 4 15 chr10 41342597 41342856 -104246432 - AluSx SINE Alu -11 301 46 28 86 0 0 chr10 41343301 41343371 -104245917 + AT_rich Low_complexity Low_complexity 1 70 0 1018 247 86 47 chr10 41343793 41344352 -104244936 + L1MC5 LINE L1 6629 7215 -746 2715 128 40 5 chr10 41344354 41344800 -104244488 + MER4C LTR ERV1 1 462 -3 492 227 9 0 chr10 41344806 41344916 -104244372 + MSTD LTR MaLR 1 111 -285 682 235 31 0 chr10 41345127 41345289 -104243999 + MSTD LTR MaLR 216 382 -14 341 69 0 17 chr10 41345710 41345768 -104243520 + (TG)n Simple_repeat Simple_repeat 2 58 0 2285 121 0 0 chr10 41346196 41346509 -104242779 - AluSq SINE Alu 0 313 1 306 0 0 0 chr10 41346707 41346741 -104242547 + (TG)n Simple_repeat Simple_repeat 2 35 0 2399 208 61 41 chr10 41347720 41348457 -104240831 - L1MC1 LINE L1 0 6333 5582 647 196 0 38 chr10 41348511 41348644 -104240644 - AluJb SINE Alu -164 148 21 479 235 76 34 chr10 41351589 41351775 -104237513 + MLT1J LTR MaLR 60 300 -211 354 265 14 82 chr10 41351805 41351952 -104237336 + L2 LINE L2 3136 3272 0 2365 97 0 0 chr10 41352225 41352524 -104236764 + AluSg SINE Alu 1 299 -11 204 392 74 17 chr10 41353444 41353740 -104235548 + L2 LINE L2 1533 1845 -1469 295 291 81 0 chr10 41353857 41353943 -104235345 - L2 LINE L2 -24 3289 3197 1932 119 33 81 chr10 41355087 41355481 -104233807 + THE1C LTR MaLR 1 375 0 407 283 194 16 chr10 41355512 41355703 -104233585 + MIR SINE MIR 35 259 -3 1517 127 0 0 chr10 41357598 41357827 -104231461 + L1PA8 LINE L1 5937 6165 -7 707 173 0 58 chr10 41358418 41358557 -104230731 - FLAM_A SINE Alu -2 131 1 1928 186 70 15 chr10 41359525 41359922 -104229366 - MSTB LTR MaLR -7 419 1 310 194 56 0 chr10 41361173 41361245 -104228043 - HAL1 LINE L1 -335 2172 2097 435 348 26 49 chr10 41361522 41361789 -104227499 - HAL1 LINE L1 -548 1959 1699 648 272 181 53 chr10 41361835 41362309 -104226979 - HAL1 LINE L1 -904 1603 1069 328 209 164 18 chr10 41362313 41362423 -104226865 - HAL1 LINE L1 -1542 965 840 281 333 0 10 chr10 41362542 41362644 -104226644 - HAL1 LINE L1 -1832 675 575 1164 176 5 32 chr10 41363363 41363579 -104225709 + AluJo SINE Alu 87 296 -16 5343 155 34 9 chr10 41363702 41365352 -104223936 - L1PB1 LINE L1 -2 6149 4452 3092 204 1 8 chr10 41365345 41366051 -104223237 + L1PB1 LINE L1 3761 4461 -1685 * 19591 110 16 15 chr10 41368324 41373790 -104215498 + L1PA8 LINE L1 717 6168 -4 2147 125 3 0 chr10 41373796 41374114 -104215174 + AluSq SINE Alu 1 319 0 255 31 0 0 chr10 41374290 41374322 -104214966 + (CAA)n Simple_repeat Simple_repeat 1 32 0 582 251 39 45 chr10 41374846 41375025 -104214263 + MER5B DNA MER1_type 1 178 0 314 194 83 111 chr10 41375050 41375194 -104214094 + MIR3 SINE MIR 68 207 -1 22 0 0 0 chr10 41375593 41375615 -104213673 + AT_rich Low_complexity Low_complexity 1 22 0 1915 162 0 3 chr10 41375794 41376091 -104213197 + AluSx SINE Alu 1 296 -16 582 274 26 0 chr10 41376716 41376869 -104212419 - MER20 DNA MER1_type -3 216 60 1230 208 201 10 chr10 41376885 41377473 -104211815 - Charlie1 DNA MER1_type -181 2580 1881 1203 192 103 33 chr10 41377541 41377812 -104211476 - AluSq SINE Alu -23 290 1 1893 106 83 0 chr10 41378364 41378650 -104210638 - AluSq SINE Alu 0 308 1 2399 91 0 0 chr10 41378680 41378987 -104210301 - AluY SINE Alu 0 311 5 2303 106 0 7 chr10 41379314 41379617 -104209671 + AluSq SINE Alu 3 303 -10 285 291 35 0 chr10 41379667 41379753 -104209535 - MER3 DNA MER1_type -109 100 12 * 305 177 177 15 chr10 41379721 41379851 -104209437 + Charlie2 DNA MER1_type 2384 2534 -328 195 280 140 26 chr10 41381091 41381284 -104208004 - L2 LINE L2 -907 2407 2193 546 232 0 9 chr10 41381304 41381416 -104207872 + FLAM_A SINE Alu 1 111 -31 2181 91 0 0 chr10 41381416 41381738 -104207550 - AluY SINE Alu 0 327 6 1230 206 91 18 chr10 41381775 41382051 -104207237 + AluJo SINE Alu 1 296 -16 713 303 121 33 chr10 41382217 41382866 -104206422 - L2 LINE L2 -5 3308 2593 243 61 0 0 chr10 41383670 41383703 -104205585 + (T)n Simple_repeat Simple_repeat 1 33 0 9309 179 43 6 chr10 41383756 41385557 -104203731 + L1PB2 LINE L1 17 1884 -5681 2106 161 2 19 chr10 41385552 41385974 -104203314 + L1PB2 LINE L1 6018 6432 -1133 * 723 171 14 43 chr10 41385977 41386117 -104203171 + AluJ SINE Alu 1 136 -176 1305 211 37 6 chr10 41386118 41386468 -104202820 + L1PB2 LINE L1 6421 6781 -784 883 234 0 0 chr10 41386469 41386623 -104202665 + AluJ SINE Alu 133 286 -26 5127 117 34 25 chr10 41386625 41387214 -104202074 + L1MA3 LINE L1 5354 5957 -348 2246 112 0 0 chr10 41387214 41387519 -104201769 - AluSg SINE Alu -5 305 1 5127 117 34 25 chr10 41387519 41387865 -104201423 + L1MA3 LINE L1 5957 6298 -7 1911 159 80 1 chr10 41388573 41389072 -104200216 + L1PB2 LINE L1 6816 7366 -204 216 97 0 0 chr10 41389088 41389119 -104200169 + (CA)n Simple_repeat Simple_repeat 2 32 0 320 177 36 18 chr10 41389701 41389953 -104199335 + AluJb SINE Alu 2 306 0 2014 114 46 0 chr10 41392709 41392990 -104196298 + AluSg1 SINE Alu 1 294 -15 22 0 0 0 chr10 41394033 41394055 -104195233 + AT_rich Low_complexity Low_complexity 1 22 0 809 257 0 0 chr10 41394182 41394353 -104194935 - FAM SINE Alu -14 171 1 802 212 0 7 chr10 41394465 41394616 -104194672 + FAM SINE Alu 16 165 -20 270 85 0 0 chr10 41395328 41395375 -104193913 - AluSx SINE Alu 0 301 255 1144 135 6 6 chr10 41395375 41395545 -104193743 - AluSx SINE Alu -142 170 1 254 261 0 0 chr10 41396023 41396092 -104193196 - MER116 DNA Mariner -5 75 7 2293 111 0 0 chr10 41396739 41397036 -104192252 - AluSg SINE Alu -8 302 6 39740 62 4 1 chr10 41397070 41403202 -104186086 + L1PA5 LINE L1 1 6147 -7 195 280 27 27 chr10 41404240 41404315 -104184973 + MER5A DNA MER1_type 1 75 -114 706 229 109 5 chr10 41404315 41404516 -104184772 + L1MD3 LINE L1 7730 7951 -44 310 311 50 25 chr10 41404525 41404644 -104184644 + MER5A DNA MER1_type 55 176 -13 483 280 60 60 chr10 41404692 41404892 -104184396 - MIR SINE MIR -54 208 9 2325 72 0 31 chr10 41405051 41405372 -104183916 - AluY SINE Alu 0 311 1 192 284 42 74 chr10 41407173 41407268 -104182020 - L2 LINE L2 -81 3191 3100 263 27 0 27 chr10 41407615 41407652 -104181636 + (TTTTTA)n Simple_repeat Simple_repeat 4 39 0 279 0 0 0 chr10 41407839 41407870 -104181418 + (A)n Simple_repeat Simple_repeat 1 31 0 2204 119 3 0 chr10 41407931 41408234 -104181054 + AluSp SINE Alu 5 308 -5 1270 238 146 23 chr10 41408542 41409071 -104180217 - MER92B LTR ERV1 -10 626 33 487 263 47 32 chr10 41409095 41409285 -104180003 + MER21B LTR ERV1 408 600 -263 567 159 34 0 chr10 41409286 41409413 -104179875 + AluSc SINE Alu 191 320 0 4210 117 55 44 chr10 41409413 41410018 -104179270 - MER4B-int LTR ERV1 -4085 2513 2085 1921 149 7 0 chr10 41410018 41410306 -104178982 - AluSq SINE Alu -19 294 5 4210 117 55 44 chr10 41410306 41410941 -104178347 - MER4B-int LTR ERV1 -4513 2085 1458 2432 106 8 0 chr10 41410969 41411327 -104177961 - L1PB1 LINE L1 -3 6148 5788 3839 114 90 14 chr10 41411327 41411982 -104177306 + MER61-int LTR ERV1 4285 4989 -228 690 260 27 27 chr10 41412341 41412714 -104176574 - L1MEc LINE L1 -2715 3667 3295 2190 142 3 0 chr10 41412737 41413048 -104176240 - AluSx SINE Alu 0 312 1 897 272 33 22 chr10 41413057 41413425 -104175863 - L1MEc LINE L1 -3379 3003 2632 367 281 150 7 chr10 41413432 41413585 -104175703 - L1MEc LINE L1 -5026 1358 1184 856 255 101 34 chr10 41413591 41414006 -104175282 - L1MEc LINE L1 -5273 1290 848 527 95 0 0 chr10 41414006 41414080 -104175208 - FAM SINE Alu -8 177 104 872 283 63 24 chr10 41414134 41414548 -104174740 - L1MEc LINE L1 -5734 829 400 297 318 52 32 chr10 41414558 41414712 -104174576 - L2 LINE L2 -1034 2280 2124 223 326 45 45 chr10 41415132 41415264 -104174024 + MIR SINE MIR 26 157 -105 24 53 0 0 chr10 41415362 41415400 -104173888 + AT_rich Low_complexity Low_complexity 1 38 0 733 172 0 0 chr10 41415511 41415627 -104173661 - FLAM_C SINE Alu -27 116 1 24 67 0 0 chr10 41416288 41416333 -104172955 + AT_rich Low_complexity Low_complexity 1 45 0 262 282 194 8 chr10 41416727 41416975 -104172313 + L1ME4a LINE L1 5765 6058 -63 28 29 0 0 chr10 41417078 41417113 -104172175 + AT_rich Low_complexity Low_complexity 1 35 0 419 196 399 0 chr10 41417274 41417407 -104171881 + MER5A DNA MER1_type 4 189 0 649 291 72 25 chr10 41417633 41417870 -104171418 - MIR SINE MIR 0 262 15 6295 221 49 35 chr10 41417905 41419689 -104169599 + L1MA7 LINE L1 1 1758 -4592 2410 93 0 3 chr10 41419689 41419990 -104169298 + AluSq SINE Alu 1 300 -13 6295 221 49 35 chr10 41419990 41422923 -104166365 + L1MA7 LINE L1 1758 4429 -1921 865 218 75 93 chr10 41422923 41423384 -104165904 - MER66A LTR ERV1 -3 475 97 1347 136 68 19 chr10 41423440 41423750 -104165538 + L1MA7 LINE L1 4426 4750 -1600 448 207 78 0 chr10 41423743 41423859 -104165429 + L1 LINE L1 5223 5347 -799 * 4223 197 48 11 chr10 41423848 41425532 -104163756 + L1MA7 LINE L1 4739 6483 -12 2659 102 6 6 chr10 41425792 41426156 -104163132 - THE1B LTR MaLR 0 364 1 248 304 49 10 chr10 41426191 41426272 -104163016 - L2 LINE L2 -4 3309 3222 2135 120 16 13 chr10 41426272 41426581 -104162707 + AluSp SINE Alu 1 310 -3 248 304 49 10 chr10 41426581 41426601 -104162687 - L2 LINE L2 -91 3222 3204 237 65 0 0 chr10 41426993 41427024 -104162264 + (TG)n Simple_repeat Simple_repeat 2 32 0 1327 167 0 0 chr10 41427171 41427387 -104161901 - MLT1A1 LTR MaLR 0 365 150 952 219 0 0 chr10 41427387 41427556 -104161732 - FAM SINE Alu -13 172 4 2306 125 49 33 chr10 41427577 41427889 -104161399 + MER4B LTR ERV1 115 421 -358 2362 64 0 0 chr10 41427889 41428194 -104161094 - AluY SINE Alu 0 305 1 2306 125 49 33 chr10 41428194 41428370 -104160918 + MER4B LTR ERV1 421 779 0 2719 84 18 11 chr10 41429948 41430328 -104158960 + L1PA11 LINE L1 5792 6174 0 253 326 23 23 chr10 41431609 41431695 -104157593 + MIR SINE MIR 17 102 -160 2455 106 11 0 chr10 41431811 41432160 -104157128 + THE1A LTR MaLR 1 353 -2 2900 164 57 4 chr10 41432511 41433042 -104156246 - MER89 LTR ERV1 0 559 1 433 264 68 36 chr10 41435730 41435980 -104153308 - L1MC4 LINE L1 -1029 7013 6756 209 182 0 0 chr10 41436096 41436129 -104153159 + polypyrimidine Low_complexity Low_complexity 6 38 0 621 314 33 25 chr10 41436151 41436393 -104152895 + MIR SINE MIR 19 262 0 209 32 0 32 chr10 41437062 41437093 -104152195 + (TTCCC)n Simple_repeat Simple_repeat 5 34 0 816 154 19 6 chr10 41437283 41437445 -104151843 - MER89 LTR ERV1 -1 558 395 229 375 39 10 chr10 41437615 41437719 -104151569 + L2 LINE L2 3125 3231 -41 2179 122 0 0 chr10 41439309 41439603 -104149685 - AluSq SINE Alu -19 294 1 211 356 100 28 chr10 41439870 41440050 -104149238 + MIR SINE MIR 27 219 -43 588 284 107 50 chr10 41440468 41440926 -104148362 - L1MC4 LINE L1 -2000 5808 5325 221 325 223 6 chr10 41441577 41441743 -104147545 - MIR SINE MIR -1 261 60 387 210 98 128 chr10 41441751 41442306 -104146982 - MER34C LTR ERV1 -5 537 3 2580 138 34 15 chr10 41442813 41443073 -104146215 + L1MA4 LINE L1 5527 5801 -499 234 0 0 0 chr10 41443073 41443099 -104146189 + (TA)n Simple_repeat Simple_repeat 2 27 0 2580 138 34 15 chr10 41443099 41443303 -104145985 + L1MA4 LINE L1 5801 6000 -300 295 188 2 0 chr10 41443323 41443398 -104145890 + L1MB3 LINE L1 6079 6154 -17 7586 16 0 1 chr10 41443766 41445258 -104144030 - L1HS LINE L1 0 6155 4666 * 9903 24 0 0 chr10 41445256 41446466 -104142822 + L1HS LINE L1 3463 4672 -1474 5793 68 4 0 chr10 41447048 41447787 -104141501 + L1PA7 LINE L1 5402 6143 -11 217 390 48 0 chr10 41448456 41448561 -104140727 + L2 LINE L2 3138 3247 -25 308 345 35 7 chr10 41448733 41448875 -104140413 + MIR3 SINE MIR 60 205 -3 230 346 58 0 chr10 41449009 41449113 -104140175 - L2 LINE L2 0 3272 3163 189 372 47 40 chr10 41449551 41449699 -104139589 + MER5A DNA MER1_type 40 188 -1 398 329 32 0 chr10 41449741 41449896 -104139392 + MIR SINE MIR 54 213 -49 182 263 35 18 chr10 41449902 41449959 -104139329 + MER5B DNA MER1_type 11 68 -110 2129 128 3 6 chr10 41450373 41450686 -104138602 + AluSx SINE Alu 1 312 0 256 272 49 0 chr10 41451097 41451366 -104137922 + (TA)n Simple_repeat Simple_repeat 1 282 0 181 0 33 33 chr10 41451512 41451542 -104137746 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1231 202 89 16 chr10 41451547 41451804 -104137484 - AluJo SINE Alu -33 279 4 1858 168 0 20 chr10 41452315 41452451 -104136837 + AluJb SINE Alu 6 143 -169 2256 104 17 0 chr10 41452451 41452750 -104136538 + AluY SINE Alu 2 305 -6 1858 168 0 20 chr10 41452750 41452911 -104136377 + AluJb SINE Alu 143 297 -15 258 247 81 65 chr10 41453352 41453451 -104135837 - MARNA DNA Mariner -253 333 228 1475 212 48 0 chr10 41453451 41453744 -104135544 + AluJo SINE Alu 1 307 -5 258 247 81 65 chr10 41453744 41453830 -104135458 - MARNA DNA Mariner -358 228 145 578 92 0 0 chr10 41454029 41454105 -104135183 + AluSc SINE Alu 197 272 -37 403 176 10 10 chr10 41454113 41454215 -104135073 + CT-rich Low_complexity Low_complexity 2 103 0 3059 177 21 59 chr10 41454457 41455174 -104134114 - LTR8 LTR ERV1 -1 690 1 425 239 192 0 chr10 41456511 41456641 -104132647 - L2 LINE L2 -1 3271 3117 260 172 0 16 chr10 41456652 41456703 -104132585 + (CATA)n Simple_repeat Simple_repeat 2 53 -11 1615 118 230 28 chr10 41456703 41457059 -104132229 - MSTA LTR MaLR 0 428 1 260 172 0 16 chr10 41457059 41457071 -104132217 + (CATA)n Simple_repeat Simple_repeat 53 64 0 311 316 164 34 chr10 41457075 41457344 -104131944 - L2 LINE L2 -150 3163 2860 2187 169 102 36 chr10 41457691 41457985 -104131303 - LTR49 LTR ERV1 0 595 322 2343 100 7 3 chr10 41457985 41458295 -104130993 + AluSq SINE Alu 1 311 -2 2187 169 102 36 chr10 41458295 41458558 -104130730 - LTR49 LTR ERV1 -273 322 1 798 171 40 29 chr10 41458695 41458870 -104130418 + MER5B DNA MER1_type 2 178 0 1975 169 64 114 chr10 41459466 41460165 -104129123 - MER4A LTR ERV1 0 664 1 720 136 16 16 chr10 41460822 41460947 -104128341 + FLAM_C SINE Alu 11 135 -8 26 62 0 15 chr10 41462192 41462215 -104127073 + AT_rich Low_complexity Low_complexity 1 23 -41 3100 90 26 21 chr10 41462215 41462282 -104127006 + L1PA13 LINE L1 5685 5750 -413 2200 125 0 0 chr10 41462282 41462579 -104126709 + AluSx SINE Alu 1 297 -15 3100 90 26 21 chr10 41462579 41462980 -104126308 + L1PA13 LINE L1 5750 6155 -8 26 62 0 15 chr10 41462980 41463021 -104126267 + AT_rich Low_complexity Low_complexity 23 64 0 789 285 65 8 chr10 41463401 41463647 -104125641 - MIR SINE MIR 0 262 3 528 232 116 0 chr10 41463831 41463943 -104125345 + FLAM_A SINE Alu 4 128 -5 319 258 113 21 chr10 41464099 41464196 -104125092 + L2 LINE L2 3157 3262 -10 361 303 9 0 chr10 41466457 41466566 -104122722 - MIR SINE MIR -1 261 152 360 295 75 62 chr10 41466595 41466822 -104122466 + L1M3c LINE L1 173 402 -5911 2419 210 93 7 chr10 41467235 41468016 -104121272 + L1M3c LINE L1 777 1787 -4516 225 325 100 0 chr10 41468016 41468094 -104121194 - MIR SINE MIR -160 102 17 621 143 9 54 chr10 41468094 41468206 -104121082 + MER5A DNA MER1_type 1 107 -82 646 247 57 71 chr10 41468327 41468663 -104120625 + MER46C DNA MER2_type 6 336 -2 244 296 105 26 chr10 41468675 41468827 -104120461 + MIR3 SINE MIR 21 184 -24 505 81 40 0 chr10 41468929 41469003 -104120285 + MADE1 DNA Mariner 3 79 -1 2164 108 48 0 chr10 41469914 41470209 -104119079 + AluSx SINE Alu 1 309 -3 1138 82 98 27 chr10 41470219 41470243 -104119045 - MER107 DNA MER1_type 0 197 176 234 0 0 0 chr10 41470243 41470269 -104119019 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1138 82 98 27 chr10 41470269 41470428 -104118860 - MER107 DNA MER1_type -21 176 1 24 32 0 0 chr10 41471060 41471091 -104118197 + AT_rich Low_complexity Low_complexity 1 31 0 266 333 194 7 chr10 41471124 41471268 -104118020 - MIR3 SINE MIR -27 181 11 293 301 38 53 chr10 41471983 41472116 -104117172 + MIR SINE MIR 22 152 -110 375 23 0 0 chr10 41472195 41472239 -104117049 + (CAT)n Simple_repeat Simple_repeat 2 45 0 309 26 0 0 chr10 41472770 41472808 -104116480 + (TG)n Simple_repeat Simple_repeat 2 39 0 1948 91 7 18 chr10 41473743 41474018 -104115270 + AluSc SINE Alu 34 305 -4 1713 172 0 7 chr10 41474448 41474738 -104114550 - AluJb SINE Alu -14 298 11 22 0 0 0 chr10 41475952 41475974 -104113314 + AT_rich Low_complexity Low_complexity 1 22 0 258 119 48 0 chr10 41476501 41476543 -104112745 + tRNA-Leu-CTG tRNA tRNA 1 44 -42 872 174 25 156 chr10 41476658 41476841 -104112447 - MER34B LTR ERV1 0 585 438 1730 197 0 7 chr10 41476841 41477131 -104112157 - AluJo SINE Alu -24 288 1 872 174 25 156 chr10 41477131 41477276 -104112012 - MER34B LTR ERV1 -147 438 276 1124 146 10 94 chr10 41477277 41477486 -104111802 - MER7A DNA MER2_type -2692 336 116 2036 126 0 32 chr10 41477486 41477825 -104111463 + AluSq SINE Alu 1 313 0 1124 146 10 94 chr10 41477825 41477913 -104111375 - MER7A DNA MER2_type -2912 116 22 1096 155 55 59 chr10 41477932 41478203 -104111085 - MER34B LTR ERV1 -291 274 5 852 293 67 78 chr10 41478664 41479145 -104110143 + L2 LINE L2 2511 2974 -339 1945 122 0 11 chr10 41479145 41479408 -104109880 - AluSq SINE Alu -53 260 1 852 293 67 78 chr10 41479408 41479661 -104109627 + L2 LINE L2 2974 3228 -85 887 277 28 20 chr10 41480002 41480255 -104109033 + MIR SINE MIR 2 256 -6 1767 74 39 0 chr10 41480271 41480529 -104108759 + L1MA1 LINE L1 6035 6302 0 29 0 0 0 chr10 41480529 41480558 -104108730 + AT_rich Low_complexity Low_complexity 1 29 0 247 327 107 39 chr10 41481137 41481342 -104107946 + MIR SINE MIR 17 235 -27 431 247 101 0 chr10 41481563 41481741 -104107547 + L1MC4 LINE L1 6877 7072 -970 993 163 19 12 chr10 41481765 41481925 -104107363 + FRAM SINE Alu 1 158 -18 2323 105 0 3 chr10 41481957 41482263 -104107025 - AluSc SINE Alu -4 305 1 1414 149 50 71 chr10 41482335 41482616 -104106672 + AluJo SINE Alu 21 295 -17 1019 201 108 0 chr10 41482895 41483173 -104106115 + L1 LINE L1 5096 5403 -743 288 256 39 0 chr10 41483265 41483343 -104105945 - MIR SINE MIR -127 135 55 4196 170 9 7 chr10 41483420 41484190 -104105098 + L1PA16 LINE L1 5382 6153 -13 371 321 155 0 chr10 41484567 41484735 -104104553 - MIR SINE MIR -14 248 55 1412 192 69 3 chr10 41485697 41486015 -104103273 - MER44D DNA MER2_type 0 609 1 1224 251 106 9 chr10 41486302 41486764 -104102524 - Charlie4a DNA MER1_type -1 507 1 2314 84 0 3 chr10 41487487 41487802 -104101486 - AluY SINE Alu 0 314 1 242 320 107 95 chr10 41487864 41488255 -104101033 - L2 LINE L2 -3 3269 2874 226 365 40 32 chr10 41488418 41488544 -104100744 - L2 LINE L2 -601 2713 2587 2124 96 0 36 chr10 41489726 41490027 -104099261 + AluSg SINE Alu 1 290 -20 194 300 20 0 chr10 41490384 41490434 -104098854 - L2 LINE L2 -19 3294 3244 259 300 50 0 chr10 41491279 41491359 -104097929 - MER91C DNA MER1_type -35 105 22 321 283 125 0 chr10 41492015 41492135 -104097153 - MLT1G1 LTR MaLR -34 561 427 866 283 32 78 chr10 41492557 41493095 -104096193 - MER34 LTR ERV1 -29 513 1 261 0 0 0 chr10 41493244 41493273 -104096015 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 1937 145 0 3 chr10 41493275 41493558 -104095730 - AluSx SINE Alu -30 282 1 1749 130 16 0 chr10 41493879 41494126 -104095162 - AluSq SINE Alu -23 290 40 2126 115 19 19 chr10 41494942 41495254 -104094034 + AluSx SINE Alu 1 312 0 23 33 0 0 chr10 41495793 41495823 -104093465 + AT_rich Low_complexity Low_complexity 1 30 0 319 197 16 0 chr10 41497041 41497102 -104092186 + MIR SINE MIR 70 131 -131 772 232 19 58 chr10 41497102 41497336 -104091952 + MIR SINE MIR 38 261 -1 25 51 0 0 chr10 41499291 41499330 -104089958 + AT_rich Low_complexity Low_complexity 1 39 0 280 250 0 36 chr10 41499330 41499414 -104089874 + MIR SINE MIR 128 208 -54 2056 127 3 3 chr10 41499644 41499952 -104089336 + AluSc SINE Alu 2 309 0 674 264 17 6 chr10 41499997 41500171 -104089117 + MER5B DNA MER1_type 3 178 0 184 154 0 51 chr10 41500466 41500505 -104088783 - L3b LINE CR1 -351 1232 1196 218 218 18 0 chr10 41501004 41501059 -104088229 + (TTTG)n Simple_repeat Simple_repeat 2 57 0 2093 134 0 0 chr10 41501291 41501598 -104087690 - AluSx SINE Alu 0 307 1 336 244 70 45 chr10 41501616 41501858 -104087430 - L1ME4a LINE L1 -238 5883 5636 318 219 20 0 chr10 41502832 41502978 -104086310 + (TA)n Simple_repeat Simple_repeat 1 149 0 1212 212 22 18 chr10 41502980 41503258 -104086030 - AluJo SINE Alu -33 279 1 298 355 60 17 chr10 41503294 41503528 -104085760 + L2 LINE L2 2613 2856 -458 205 109 43 22 chr10 41503921 41503967 -104085321 + (TAAA)n Simple_repeat Simple_repeat 4 50 0 2428 76 0 0 chr10 41504544 41504848 -104084440 - AluY SINE Alu -7 304 1 699 197 16 0 chr10 41504922 41505049 -104084239 - FLAM_C SINE Alu -4 129 1 1605 233 36 42 chr10 41505226 41505732 -104083556 - MLT1D LTR MaLR 0 505 3 3715 58 6 0 chr10 41505932 41506400 -104082888 + L1PA8 LINE L1 5700 6170 -2 364 318 104 50 chr10 41506529 41507190 -104082098 - L1M4 LINE L1 -3118 3028 2332 504 195 205 25 chr10 41507225 41507425 -104081863 - MER106A DNA MER1_type 0 236 1 348 24 0 0 chr10 41508083 41508124 -104081164 + (TG)n Simple_repeat Simple_repeat 2 42 0 400 306 34 14 chr10 41508844 41508991 -104080297 + MIR3 SINE MIR 44 193 -15 554 209 174 94 chr10 41509350 41509861 -104079427 + MER34C LTR ERV1 34 585 0 2105 122 0 13 chr10 41510167 41510470 -104078818 + AluSx SINE Alu 1 299 -13 229 256 12 23 chr10 41511334 41511404 -104077884 + CT-rich Low_complexity Low_complexity 4 74 -14 1669 161 21 18 chr10 41511404 41511690 -104077598 - AluJo SINE Alu -11 301 15 229 256 12 23 chr10 41511690 41511705 -104077583 + CT-rich Low_complexity Low_complexity 74 88 0 246 208 0 0 chr10 41512083 41512136 -104077152 + CT-rich Low_complexity Low_complexity 2 54 0 1965 143 13 0 chr10 41512142 41512475 -104076813 - AluSx SINE Alu 0 312 1 1917 157 0 16 chr10 41512893 41513199 -104076089 - AluSx SINE Alu -11 301 1 368 256 92 0 chr10 41513363 41513499 -104075789 - MIR SINE MIR -64 198 42 22 0 0 0 chr10 41514331 41514353 -104074935 + AT_rich Low_complexity Low_complexity 1 22 0 2519 279 69 12 chr10 41516829 41518372 -104070916 - L1ME3A LINE L1 -15 6155 4523 377 255 77 21 chr10 41518392 41518627 -104070661 - L1ME3A LINE L1 -3161 2985 2738 28 29 0 0 chr10 41518627 41518662 -104070626 + AT_rich Low_complexity Low_complexity 1 35 0 2294 121 0 0 chr10 41518923 41519229 -104070059 - AluSg SINE Alu -4 306 1 28 0 0 0 chr10 41519704 41519732 -104069556 + AT_rich Low_complexity Low_complexity 1 28 0 859 165 0 82 chr10 41519961 41520131 -104069157 - FRAM SINE Alu -20 156 1 314 368 32 8 chr10 41520234 41520359 -104068929 - L2 LINE L2 -5 3267 3140 1017 202 204 34 chr10 41520365 41520810 -104068478 - HsTC2a DNA Tc2 -216 528 8 22 56 0 0 chr10 41521505 41521541 -104067747 + AT_rich Low_complexity Low_complexity 1 36 0 1048 130 35 25 chr10 41521557 41521757 -104067531 - L1MA8 LINE L1 -30 6261 6060 918 89 39 21 chr10 41522131 41522414 -104066874 + (TAGA)n Simple_repeat Simple_repeat 4 289 0 263 138 21 43 chr10 41522452 41522546 -104066742 + (TAGA)n Simple_repeat Simple_repeat 2 93 0 758 234 73 108 chr10 41522550 41522922 -104066366 - MLT1A1 LTR MaLR -1 364 6 880 45 0 0 chr10 41523687 41523798 -104065490 - L1PA5 LINE L1 -4 6150 6040 225 304 70 43 chr10 41524485 41524600 -104064688 + MIR SINE MIR 7 124 -138 2221 102 3 0 chr10 41524620 41524905 -104064383 - AluSq SINE Alu -27 286 1 367 273 58 8 chr10 41524925 41525046 -104064242 + MIR SINE MIR 124 250 -12 2509 54 0 3 chr10 41525668 41525965 -104063323 + AluY SINE Alu 1 296 -15 846 183 6 74 chr10 41525975 41526150 -104063138 + FRAM SINE Alu 1 163 -13 2165 127 0 0 chr10 41526151 41526443 -104062845 + AluSg SINE Alu 1 292 -18 843 131 15 0 chr10 41526707 41526837 -104062451 - FLAM_C SINE Alu 0 133 2 750 312 113 60 chr10 41527138 41528552 -104060736 + L2 LINE L2 1246 2734 -580 185 222 0 22 chr10 41528978 41529023 -104060265 + L2 LINE L2 3265 3308 -5 228 67 0 0 chr10 41530761 41530791 -104058497 + (A)n Simple_repeat Simple_repeat 1 30 0 570 239 75 0 chr10 41531186 41531387 -104057901 - L1MD3 LINE L1 -9 7986 7771 180 191 48 0 chr10 41532046 41532088 -104057200 + MER5A DNA MER1_type 125 168 -21 * 193 182 0 0 chr10 41532076 41532109 -104057179 + L2 LINE L2 3274 3306 -7 23 33 0 0 chr10 41533826 41533856 -104055432 + AT_rich Low_complexity Low_complexity 1 30 0 2214 102 3 23 chr10 41534373 41534500 -104054788 + AluSx SINE Alu 1 129 -183 252 86 0 0 chr10 41534500 41534535 -104054753 + (TA)n Simple_repeat Simple_repeat 2 36 0 2214 102 3 23 chr10 41534535 41534712 -104054576 + AluSx SINE Alu 129 299 -13 289 148 98 0 chr10 41534986 41535047 -104054241 + MER5C DNA MER1_type 54 120 -204 3814 112 20 27 chr10 41535047 41535431 -104053857 - MER51C LTR ERV1 0 640 280 4613 70 52 5 chr10 41535431 41536061 -104053227 + PABL_A LTR ERV1 1 660 0 3814 112 20 27 chr10 41536061 41536339 -104052949 - MER51C LTR ERV1 -360 280 1 585 193 176 0 chr10 41536340 41536516 -104052772 + MER5C DNA MER1_type 118 324 0 2284 110 0 10 chr10 41539479 41539788 -104049500 - AluSg SINE Alu -4 306 1 256 135 0 0 chr10 41539872 41539909 -104049379 - Alu SINE Alu -265 37 1 240 162 0 0 chr10 41539996 41540033 -104049255 - Alu SINE Alu -262 37 1 250 269 43 92 chr10 41540219 41540360 -104048928 - MIR3 SINE MIR -65 143 10 21 36 0 0 chr10 41540518 41540546 -104048742 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr10 41542911 41542939 -104046349 + AT_rich Low_complexity Low_complexity 1 28 0 444 62 0 0 chr10 41543733 41543797 -104045491 + (CA)n Simple_repeat Simple_repeat 2 65 0 5810 164 31 28 chr10 41544617 41545210 -104044078 - L1MC3 LINE L1 -27 7758 7169 2382 100 7 0 chr10 41545210 41545520 -104043768 + AluSp SINE Alu 1 312 -1 5810 164 31 28 chr10 41545520 41546164 -104043124 - L1MC3 LINE L1 -616 7169 6516 585 286 91 12 chr10 41546675 41546916 -104042372 - MIR SINE MIR -1 261 2 187 344 16 0 chr10 41547238 41547299 -104041989 - L2 LINE L2 -5 3267 3206 1922 132 19 0 chr10 41547482 41547748 -104041540 - AluSx SINE Alu -19 293 23 719 258 121 5 chr10 41547789 41547979 -104041309 + MIR SINE MIR 17 228 -34 342 358 11 6 chr10 41547986 41548165 -104041123 + (TG)n Simple_repeat Simple_repeat 1 180 0 207 239 57 0 chr10 41549134 41549222 -104040066 + A-rich Low_complexity Low_complexity 2 94 0 204 349 61 0 chr10 41549673 41549739 -104039549 + L2 LINE L2 3197 3266 -47 314 317 0 17 chr10 41551323 41551443 -104037845 - MER117 DNA MER1_type -52 145 28 375 326 190 34 chr10 41552077 41552430 -104036858 + L2 LINE L2 2860 3267 -5 251 182 45 82 chr10 41552949 41553059 -104036229 - MER103 DNA DNA -11 155 50 285 212 0 30 chr10 41553336 41553402 -104035886 + MIR3 SINE MIR 121 184 -24 27617 46 7 0 chr10 41553463 41557862 -104031426 - L1PA5 LINE L1 -8 6146 1720 443 278 66 36 chr10 41558025 41558410 -104030878 - MLT1J LTR MaLR -24 487 50 1844 143 7 11 chr10 41558881 41559168 -104030120 + AluJb SINE Alu 1 286 -26 21 0 0 0 chr10 41559169 41559190 -104030098 + AT_rich Low_complexity Low_complexity 1 21 0 2201 113 0 0 chr10 41559375 41559667 -104029621 + AluSg SINE Alu 1 292 -18 281 311 11 56 chr10 41560688 41560868 -104028420 + MIR SINE MIR 65 236 -26 294 272 98 11 chr10 41561099 41561191 -104028097 + MIR SINE MIR 76 175 -87 268 197 148 0 chr10 41561571 41561632 -104027656 - L2 LINE L2 0 3313 3244 250 248 73 59 chr10 41561633 41561873 -104027415 + L1MEd LINE L1 1076 1353 -4862 758 184 0 0 chr10 41561922 41562047 -104027241 + FLAM_C SINE Alu 3 127 -16 2766 238 52 22 chr10 41562053 41563105 -104026183 - L1M4 LINE L1 -2365 3781 2698 522 279 118 42 chr10 41563552 41563814 -104025474 + L2 LINE L2 3032 3313 0 2602 180 78 3 chr10 41565143 41565711 -104023577 + LTR31 LTR ERV1 1 610 -9 921 211 160 82 chr10 41566537 41567012 -104022276 + MLT1E2 LTR MaLR 115 626 0 512 254 134 22 chr10 41567217 41567474 -104021814 + L1ME LINE L1 5397 5682 -439 869 274 20 14 chr10 41567518 41567814 -104021474 - MER46C DNA MER2_type -40 298 1 863 163 48 66 chr10 41568272 41568629 -104020659 - MSTD LTR MaLR 0 457 54 1637 127 120 8 chr10 41568629 41568888 -104020400 - AluSg1 SINE Alu -21 288 1 863 163 48 66 chr10 41568888 41568942 -104020346 - MSTD LTR MaLR -403 54 1 1751 155 32 91 chr10 41569047 41569290 -104019998 - LTR56 LTR ERV1 0 445 240 508 115 0 0 chr10 41569290 41569368 -104019920 - L1PA7 LINE L1 0 6154 6077 1751 155 32 91 chr10 41569368 41569588 -104019700 - LTR56 LTR ERV1 -205 240 9 189 0 0 0 chr10 41569919 41569940 -104019348 + (TATG)n Simple_repeat Simple_repeat 2 22 0 2300 91 3 0 chr10 41570351 41570647 -104018641 - AluSp SINE Alu -16 297 1 2944 64 3 13 chr10 41571217 41571605 -104017683 + L1PA6 LINE L1 5754 6137 -17 180 0 0 0 chr10 41571605 41571625 -104017663 + (CTA)n Simple_repeat Simple_repeat 1 20 0 207 0 0 0 chr10 41571738 41571761 -104017527 + (A)n Simple_repeat Simple_repeat 1 23 0 1019 167 43 0 chr10 41574944 41574991 -104014297 + MER3 DNA MER1_type 4 58 -151 336 238 100 44 chr10 41574991 41575151 -104014137 - MER3 DNA MER1_type -3 206 38 781 159 16 0 chr10 41575643 41575769 -104013519 - FRAM SINE Alu -20 156 29 758 258 152 16 chr10 41578472 41578848 -104010440 + L1ME3 LINE L1 5646 6072 -90 1139 197 106 3 chr10 41579355 41579639 -104009649 - MER33 DNA MER1_type 0 324 12 421 190 60 20 chr10 41579675 41579775 -104009513 + MER5A DNA MER1_type 4 107 -82 832 216 79 0 chr10 41579966 41580156 -104009132 + MER3 DNA MER1_type 4 208 -1 563 126 0 0 chr10 41581607 41581694 -104007594 - AluJo/FRAM SINE Alu -16 296 210 1088 139 0 6 chr10 41581694 41581852 -104007436 + AluSc SINE Alu 136 292 -17 1145 150 70 121 chr10 41581892 41582206 -104007082 + AluJb SINE Alu 2 299 -3 279 231 148 74 chr10 41582290 41582398 -104006890 + AluJb SINE Alu 110 225 -77 1198 124 5 62 chr10 41582403 41582612 -104006676 - AluJb SINE Alu -114 198 2 524 161 0 0 chr10 41582672 41582753 -104006535 - AluSg/x SINE Alu -23 286 206 2096 82 14 20 chr10 41582833 41583125 -104006163 - AluSg SINE Alu -20 290 1 260 143 159 0 chr10 41584193 41584256 -104005032 + AluJb SINE Alu 45 117 -185 450 202 0 20 chr10 41584282 41584381 -104004907 + FRAM SINE Alu 63 159 -17 954 101 22 29 chr10 41584441 41584580 -104004708 + AluJo SINE Alu 23 160 -152 546 179 7 86 chr10 41584587 41584727 -104004561 - FLAM_C SINE Alu 0 133 5 1993 114 11 0 chr10 41584767 41585040 -104004248 + AluSx SINE Alu 2 277 -35 1023 227 15 0 chr10 41585042 41585245 -104004043 + AluJo SINE Alu 76 281 -31 180 0 0 0 chr10 41585245 41585265 -104004023 + (CTAG)n Simple_repeat Simple_repeat 1 20 0 2071 115 0 33 chr10 41585988 41586316 -104002972 - AluSq SINE Alu 0 313 1 2272 102 10 0 chr10 41586338 41586633 -104002655 + AluSp SINE Alu 1 298 -15 2224 113 6 3 chr10 41586770 41587081 -104002207 - AluSx SINE Alu 0 312 1 2146 139 0 13 chr10 41587295 41587474 -104001814 - AluSx SINE Alu 0 312 137 2266 119 3 0 chr10 41587474 41587777 -104001511 - AluSp SINE Alu -9 304 1 2146 139 0 13 chr10 41587777 41587913 -104001375 - AluSx SINE Alu -175 137 1 225 266 16 0 chr10 41589396 41589460 -103999828 + MIR SINE MIR 21 85 -177 305 98 0 0 chr10 41590146 41590197 -103999091 + AluSp/q SINE Alu 251 301 -2 2014 110 14 3 chr10 41591054 41591356 -103997932 + AluSq SINE Alu 1 305 0 1740 171 14 0 chr10 41592145 41592437 -103996851 + AluSx SINE Alu 2 297 -15 2155 131 0 3 chr10 41592614 41592920 -103996368 - AluSx SINE Alu -7 305 1 1365 221 175 2 chr10 41592951 41593380 -103995908 - MLT1D LTR MaLR -2 503 1 1316 156 40 46 chr10 41593508 41593810 -103995478 - AluY SINE Alu -11 300 1 2213 112 0 0 chr10 41594504 41594799 -103994489 - AluSg1 SINE Alu -14 295 1 2227 107 10 0 chr10 41594860 41595159 -103994129 + AluSp SINE Alu 3 304 -9 2111 114 4 0 chr10 41595956 41596237 -103993051 - AluSg SINE Alu -28 282 1 1741 162 10 7 chr10 41596978 41597268 -103992020 - AluSx SINE Alu -19 293 3 1783 124 0 12 chr10 41597579 41597836 -103991452 - AluSq SINE Alu -14 299 46 411 192 27 0 chr10 41597836 41597909 -103991379 - AluS SINE Alu -237 76 2 180 0 0 0 chr10 41598114 41598134 -103991154 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 1787 155 11 4 chr10 41598135 41598413 -103990875 - AluSq SINE Alu -33 280 1 1677 173 88 16 chr10 41599534 41599852 -103989436 + MSTD LTR MaLR 1 341 -55 678 163 17 22 chr10 41599887 41600065 -103989223 + CT-rich Low_complexity Low_complexity 4 180 0 359 182 0 0 chr10 41600065 41600131 -103989157 + MSTD LTR MaLR 330 395 -1 857 205 42 121 chr10 41600614 41600946 -103988342 - L1MC4 LINE L1 -938 7069 6718 1814 98 0 0 chr10 41602662 41602886 -103986402 - AluSq SINE Alu -87 226 3 369 0 0 0 chr10 41603205 41603246 -103986042 + (TG)n Simple_repeat Simple_repeat 2 42 0 1593 208 0 0 chr10 41603247 41603531 -103985757 - AluJb SINE Alu -28 284 1 1063 138 0 0 chr10 41603943 41604088 -103985200 - AluJb SINE Alu -38 274 130 543 176 9 65 chr10 41604099 41604207 -103985081 - MER8 DNA MER2_type -134 105 4 631 175 29 0 chr10 41604427 41604530 -103984758 + U6 snRNA snRNA 2 107 0 308 254 4 33 chr10 41604572 41604690 -103984598 - L1MC4 LINE L1 -469 5652 5577 482 111 12 25 chr10 41604695 41604776 -103984512 + AluJ/FLAM SINE Alu 4 83 -229 2163 116 7 0 chr10 41604971 41605265 -103984023 - AluSg SINE Alu -14 296 1 1486 191 30 30 chr10 41605326 41605629 -103983659 - AluJo SINE Alu -7 305 3 32 26 0 0 chr10 41605699 41605738 -103983550 + AT_rich Low_complexity Low_complexity 1 39 0 356 266 18 18 chr10 41605891 41606000 -103983288 - L1MC4a LINE L1 -1977 5831 5723 1376 223 7 23 chr10 41606038 41606339 -103982949 + AluJo SINE Alu 1 296 -16 592 235 0 0 chr10 41606341 41606456 -103982832 + AluJb SINE Alu 185 299 -13 207 203 47 31 chr10 41606834 41606898 -103982390 + (GGGTG)n Simple_repeat Simple_repeat 1 65 0 219 299 93 31 chr10 41607128 41607225 -103982063 - MIR SINE MIR -75 187 85 7065 110 23 16 chr10 41607352 41608416 -103980872 - MER11C LTR ERVK 0 1071 1 2727 232 80 40 chr10 41608436 41608717 -103980571 - MER21B LTR ERV1 -61 802 534 1824 161 0 16 chr10 41608717 41609022 -103980266 - AluJo SINE Alu -12 300 1 2727 232 80 40 chr10 41609022 41609331 -103979957 - MER21B LTR ERV1 -329 534 173 2052 143 0 3 chr10 41609331 41609625 -103979663 + AluSq SINE Alu 1 293 -20 2727 232 80 40 chr10 41609625 41609787 -103979501 - MER21B LTR ERV1 -690 173 19 346 291 0 0 chr10 41609809 41609888 -103979400 - MER21B LTR ERV1 -773 90 12 1507 206 0 7 chr10 41609894 41610166 -103979122 - AluJo SINE Alu -38 274 5 1499 194 14 57 chr10 41610169 41610520 -103978768 + MLT1D LTR MaLR 162 497 -8 1568 199 10 14 chr10 41610547 41610674 -103978614 + AluJb SINE Alu 10 136 -176 2106 102 35 0 chr10 41610674 41610958 -103978330 + AluSg1 SINE Alu 1 294 -15 1568 199 10 14 chr10 41610958 41611121 -103978167 + AluJb SINE Alu 136 299 -13 1216 271 80 32 chr10 41611121 41611732 -103977556 - L2 LINE L2 -216 3097 2456 749 196 0 0 chr10 41611829 41611962 -103977326 + FLAM_C SINE Alu 1 133 0 23 0 0 0 chr10 41611962 41611985 -103977303 + AT_rich Low_complexity Low_complexity 1 23 0 1303 240 10 7 chr10 41611985 41612281 -103977007 + AluJo SINE Alu 2 298 -4 342 245 11 11 chr10 41612426 41612520 -103976768 + LTR37A LTR ERV1 240 333 -93 2062 147 0 3 chr10 41612731 41613037 -103976251 - AluSq SINE Alu -8 305 1 1621 185 20 20 chr10 41613339 41613641 -103975647 - AluJo SINE Alu -10 302 1 2776 196 39 34 chr10 41613662 41614281 -103975007 - L1MB8 LINE L1 -5 6173 5552 671 189 0 0 chr10 41614281 41614392 -103974896 + FLAM_A SINE Alu 4 114 -19 481 173 8 102 chr10 41614426 41614514 -103974774 - L1ME LINE L1 -577 5589 5505 1694 181 10 7 chr10 41614514 41614807 -103974481 - AluJb SINE Alu -18 294 1 481 173 8 102 chr10 41614807 41614838 -103974450 - L1ME LINE L1 -661 5505 5473 597 201 0 122 chr10 41614896 41614956 -103974332 + AluJo SINE Alu 24 90 -222 312 83 0 0 chr10 41614956 41615004 -103974284 + (TTG)n Simple_repeat Simple_repeat 1 48 0 1802 153 22 4 chr10 41615004 41615278 -103974010 - AluSx SINE Alu -33 279 1 597 201 0 122 chr10 41615278 41615380 -103973908 + AluJo SINE Alu 88 167 -145 1396 166 126 15 chr10 41615394 41615665 -103973623 - AluJo SINE Alu -1 301 1 1373 238 0 14 chr10 41615918 41616212 -103973076 - AluJo SINE Alu -18 294 5 344 201 25 132 chr10 41616213 41616372 -103972916 - MLT1D LTR MaLR -292 213 72 189 261 72 14 chr10 41616441 41616510 -103972778 - L2 LINE L2 -32 3281 3209 1726 179 0 13 chr10 41617143 41617450 -103971838 - AluJb SINE Alu -9 303 1 2310 98 3 0 chr10 41617536 41617831 -103971457 - AluSp SINE Alu -17 296 1 24 53 0 0 chr10 41617831 41617869 -103971419 + AT_rich Low_complexity Low_complexity 1 38 0 1853 165 0 3 chr10 41617871 41618162 -103971126 - AluJb SINE Alu -18 294 5 2982 127 9 2 chr10 41618522 41618954 -103970334 + MER1A DNA MER1_type 56 490 -39 704 197 0 0 chr10 41618967 41619084 -103970204 - FLAM_C SINE Alu -18 125 9 569 126 53 0 chr10 41619125 41619403 -103969885 + AluJb SINE Alu 194 476 0 1154 0 16 55 chr10 41619221 41619497 -103969791 + (TAAAA)n Simple_repeat Simple_repeat 3 271 0 191 281 21 31 chr10 41619799 41619895 -103969393 - L2 LINE L2 -211 3061 2967 244 360 36 0 chr10 41620178 41620289 -103968999 - MIR SINE MIR -75 187 73 2595 235 51 43 chr10 41620452 41620697 -103968591 - MER21B LTR ERV1 -112 751 510 1604 208 13 0 chr10 41620697 41620995 -103968293 - AluJo SINE Alu -10 302 1 2595 235 51 43 chr10 41620995 41621065 -103968223 - MER21B LTR ERV1 -353 510 442 1589 186 3 46 chr10 41621065 41621371 -103967917 + AluJb SINE Alu 2 294 -18 2595 235 51 43 chr10 41621371 41621781 -103967507 - MER21B LTR ERV1 -421 442 19 306 286 0 0 chr10 41621807 41621877 -103967411 - MER21B LTR ERV1 -777 86 17 1119 177 3 118 chr10 41621878 41622166 -103967122 - AluJb SINE Alu -13 299 45 686 225 0 0 chr10 41622166 41622286 -103967002 - FLAM_A SINE Alu -13 120 1 648 235 0 7 chr10 41622291 41622427 -103966861 - FLAM_C SINE Alu -7 136 2 1502 175 25 76 chr10 41622427 41622781 -103966507 + MLT1D LTR MaLR 162 497 -8 1719 178 23 13 chr10 41622790 41622924 -103966364 + AluJo SINE Alu 1 132 -180 2152 116 0 10 chr10 41622924 41623236 -103966052 + AluSq SINE Alu 1 313 0 1719 178 23 13 chr10 41623236 41623410 -103965878 + AluJo SINE Alu 132 312 0 1060 228 92 73 chr10 41623411 41624049 -103965239 - L2 LINE L2 -213 3100 2458 591 241 0 0 chr10 41624155 41624271 -103965017 + FLAM_C SINE Alu 9 124 -19 1300 234 14 3 chr10 41624295 41624590 -103964698 + AluJo SINE Alu 1 298 -14 2141 115 3 7 chr10 41624748 41625043 -103964245 + AluSq SINE Alu 5 298 -15 28 61 0 0 chr10 41625065 41625114 -103964174 + AT_rich Low_complexity Low_complexity 1 49 0 * 268 211 228 22 chr10 41625086 41625266 -103964022 + Charlie1 DNA MER1_type 2539 2755 -6 1358 205 8 4 chr10 41625320 41625588 -103963700 - AluJo SINE Alu -4 308 40 1054 189 0 5 chr10 41626188 41626378 -103962910 - AluJb SINE Alu -7 305 117 388 226 39 49 chr10 41626378 41626480 -103962808 - MER8 DNA MER2_type -136 103 3 1565 187 0 13 chr10 41626588 41626888 -103962400 + AluJo SINE Alu 1 296 -16 532 206 14 78 chr10 41627126 41627267