33752 67 32 9 chr6_random 0 4867 -734451 - L1P LINE L1 -1161 4985 7 268 238 0 63 chr6_random 4880 4943 -734375 + MER5A DNA MER1_type 131 189 0 1041 317 29 63 chr6_random 5255 5766 -733552 + L2 LINE L2 2820 3313 0 17684 80 2 9 chr6_random 5816 8330 -730988 + L1P LINE L1 1 2495 -3651 5285 112 113 91 chr6_random 8332 9827 -729491 + pTR5 LTR ERV1 743 2438 0 34129 95 4 11 chr6_random 9830 14811 -724507 + HERV9 LTR ERV1 1 4944 -3455 573 130 235 12 chr6_random 14812 15059 -724259 + HERV9 LTR ERV1 840 1141 -5755 329 161 0 0 chr6_random 15057 15119 -724199 + HERV9 LTR ERV1 7503 7564 -835 * 5856 107 85 67 chr6_random 15115 17058 -722260 + pTR5 LTR ERV1 504 8399 0 21783 76 1 3 chr6_random 17069 20706 -718612 + L1PA4 LINE L1 2501 6154 -1 995 174 5 5 chr6_random 20741 21841 -717477 + ALR/Alpha Satellite centromeric 1 1099 -29 956 163 1 0 chr6_random 21941 22661 -716657 + ALR/Alpha Satellite centromeric 1 720 -32 5030 82 1 0 chr6_random 22713 23397 -715921 - L1PA4 LINE L1 0 6155 5471 1025 168 2 1 chr6_random 23397 25040 -714278 + ALR/Alpha Satellite centromeric 1 1644 -14 928 188 8 7 chr6_random 25054 25519 -713799 + ALR/Alpha Satellite centromeric 1 465 -49 1141 156 5 2 chr6_random 25926 31108 -708210 + ALR/Alpha Satellite centromeric 1 5194 0 16909 73 6 2 chr6_random 31277 33838 -705480 + L1P2 LINE L1 2955 5524 -630 1030 161 5 8 chr6_random 33941 33976 -705342 - ALR/Alpha Satellite centromeric 0 3275 3241 4341 55 7 40 chr6_random 33976 34581 -704737 + L1PA4 LINE L1 5568 6152 -3 1030 161 5 8 chr6_random 34581 37228 -702090 - ALR/Alpha Satellite centromeric -34 3241 1 23083 70 9 0 chr6_random 37367 40554 -698764 - L1P LINE L1 -2929 3217 2 1325 254 26 20 chr6_random 40558 41014 -698304 - L1M3c LINE L1 -4752 1389 931 609 336 47 21 chr6_random 41277 41699 -697619 - L1M3c LINE L1 -5708 433 1 1569 128 0 0 chr6_random 42539 42757 -696561 + AluSx SINE Alu 1 218 -94 246 62 0 0 chr6_random 42771 42803 -696515 + (A)n Simple_repeat Simple_repeat 1 32 0 3726 34 21 0 chr6_random 43016 43488 -695830 - L1PA4 LINE L1 -293 5862 5381 2149 256 24 89 chr6_random 43487 44950 -694368 - L1MDb LINE L1 -2482 3924 2558 * 186 71 0 0 chr6_random 44952 44980 -694338 + (TA)n Simple_repeat Simple_repeat 1 28 0 2239 260 95 31 chr6_random 44994 46616 -692702 - L1MDb LINE L1 -3945 2461 776 30 27 0 0 chr6_random 47380 47417 -691901 + AT_rich Low_complexity Low_complexity 1 37 0 191 408 15 31 chr6_random 47525 47655 -691663 - MIR SINE MIR -128 134 7 291 114 0 0 chr6_random 48255 48299 -691019 + (TC)n Simple_repeat Simple_repeat 1 44 0 25 0 0 0 chr6_random 48341 48366 -690952 + AT_rich Low_complexity Low_complexity 1 25 0 184 360 0 0 chr6_random 48391 48441 -690877 - MIR SINE MIR -120 88 39 375 264 80 25 chr6_random 48454 48617 -690701 + MIR SINE MIR 88 259 -3 1463 119 0 4 chr6_random 51098 51325 -687993 - pTR5 LTR ERV1 -2041 397 172 281 293 10 0 chr6_random 51327 51426 -687892 - LTR30 LTR ERV1 -79 643 544 417 86 0 0 chr6_random 51430 51488 -687830 - pTR5 LTR ERV1 -417 2021 1964 3541 39 0 5 chr6_random 51498 51936 -687382 - L1PA3 LINE L1 0 6155 5720 19063 35 1 0 chr6_random 51938 54501 -684817 - L1PA3 LINE L1 -552 5603 3039 16198 57 1 0 chr6_random 54501 56580 -682738 + L1PA3 LINE L1 963 3043 -3103 3230 168 37 57 chr6_random 56580 57419 -681899 - pTR5 LTR ERV1 -490 1523 5 922 257 43 27 chr6_random 58453 58934 -680384 + MER66A LTR ERV1 90 468 -10 388 274 91 43 chr6_random 59503 59711 -679607 - L1MC4 LINE L1 -120 7922 7705 213 256 107 8 chr6_random 60598 60696 -678622 + MIR SINE MIR 84 192 -70 182 211 26 0 chr6_random 61771 61809 -677509 - L2 LINE L2 -17 3296 3258 184 290 53 46 chr6_random 61908 62039 -677279 - MIR3 SINE MIR -67 141 10 2018 125 0 0 chr6_random 62586 62916 -676402 + AluSx SINE Alu 1 330 0 493 276 9 0 chr6_random 63696 63801 -675517 + MER5A DNA MER1_type 4 109 -80 19894 46 3 10 chr6_random 63839 67159 -672159 - L1PA3 LINE L1 -4 6151 2847 1196 155 5 2 chr6_random 67259 85899 -653419 + ALR/Alpha Satellite centromeric 1 18692 -68 23095 77 1 2 chr6_random 85913 88969 -650349 - L1P LINE L1 -3087 3059 7 1219 162 3 1 chr6_random 88981 104645 -634673 + ALR/Alpha Satellite centromeric 1 15695 -30 6770 75 3 0 chr6_random 104647 105699 -633619 - L1PA3 LINE L1 -1 6154 5103 10563 46 1 1 chr6_random 105699 107014 -632304 + L1P LINE L1 3728 5042 -1104 1231 162 4 3 chr6_random 107014 130682 -608636 + ALR/Alpha Satellite centromeric 1 23982 -2711 2713 17 0 0 chr6_random 130682 130979 -608339 - AluYa5 SINE Alu -14 297 1 1231 162 4 3 chr6_random 130979 133693 -605625 + ALR/Alpha Satellite centromeric 23982 26693 0 307 259 61 46 chr6_random 134069 134200 -605118 - MER94 DNA DNA 0 134 2 368 375 122 0 chr6_random 134212 134457 -604861 - L1MEc LINE L1 -6012 384 110 977 233 122 14 chr6_random 134513 134882 -604436 - L1ME3 LINE L1 -290 5872 5464 24 0 0 0 chr6_random 134994 135018 -604300 + AT_rich Low_complexity Low_complexity 1 24 0 29 28 0 0 chr6_random 135063 135099 -604219 + AT_rich Low_complexity Low_complexity 1 36 0 25 31 0 0 chr6_random 135858 135890 -603428 + AT_rich Low_complexity Low_complexity 1 32 0 36 40 0 0 chr6_random 136135 136185 -603133 + AT_rich Low_complexity Low_complexity 1 50 0 3232 188 7 8 chr6_random 136430 137031 -602287 - L1PA16 LINE L1 -25 6141 5542 1121 212 35 111 chr6_random 138073 138450 -600868 + MLT1A1 LTR MaLR 1 348 -17 607 236 56 0 chr6_random 138451 138612 -600706 + LTR33A LTR ERVL 317 486 -37 26 0 0 0 chr6_random 138789 138815 -600503 + AT_rich Low_complexity Low_complexity 1 26 0 616 197 0 17 chr6_random 139041 139158 -600160 + MLT1A1 LTR MaLR 539 653 -1 180 0 0 0 chr6_random 139632 139652 -599666 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 267 162 59 15 chr6_random 139662 139730 -599588 + (CAAA)n Simple_repeat Simple_repeat 2 72 0 1206 214 46 61 chr6_random 139742 139828 -599490 - L1ME3 LINE L1 -1215 4931 4845 2044 119 0 11 chr6_random 139828 140140 -599178 + AluSq SINE Alu 3 311 0 1206 214 46 61 chr6_random 140140 140444 -598874 - L1ME3 LINE L1 -1301 4845 4546 414 226 0 0 chr6_random 140694 140787 -598531 - L1ME3 LINE L1 -1557 4589 4497 18680 52 2 1 chr6_random 140790 143984 -595334 - L1PA4 LINE L1 -3 6152 2955 1194 154 5 1 chr6_random 144146 146564 -592754 + ALR/Alpha Satellite centromeric 1 2427 -26 29889 72 2 3 chr6_random 146570 152737 -586581 + L1PA3 LINE L1 5 6152 -3 1191 150 6 3 chr6_random 152743 157426 -581892 + ALR/Alpha Satellite centromeric 1 5958 -1560 6435 81 4 16 chr6_random 157426 158675 -580643 - L1PA4 LINE L1 -3 6152 4909 1191 150 6 3 chr6_random 158675 160217 -579101 + ALR/Alpha Satellite centromeric 5958 7494 -24 1901 26 18 0 chr6_random 160225 160454 -578864 - L1PA3 LINE L1 -1 6154 5922 36081 58 34 2 chr6_random 160454 165382 -573936 - L1P LINE L1 -1059 5087 3 1074 155 4 2 chr6_random 165389 169650 -569668 + ALR/Alpha Satellite centromeric 1 4269 -26 35929 70 5 3 chr6_random 169653 173947 -565371 - L1PA3 LINE L1 -5 6150 1840 2049 119 7 0 chr6_random 173947 174241 -565077 + AluY SINE Alu 1 296 -15 35929 70 5 3 chr6_random 174241 175737 -563581 - L1PA3 LINE L1 -4315 1840 348 1215 147 2 1 chr6_random 175745 178008 -561310 + ALR/Alpha Satellite centromeric 1 2265 -7 1223 149 4 1 chr6_random 178021 180562 -558756 + ALR/Alpha Satellite centromeric 1 2548 -7 1185 143 3 1 chr6_random 180575 183184 -556134 + ALR/Alpha Satellite centromeric 1 2614 -26 308 211 156 9 chr6_random 183286 183395 -555923 - L1MCa LINE L1 -4474 2090 1966 522 252 199 7 chr6_random 183439 183676 -555642 - L1MCa LINE L1 -4730 1834 1531 183 42 0 0 chr6_random 183676 183700 -555618 + (TG)n Simple_repeat Simple_repeat 2 25 0 522 252 199 7 chr6_random 183700 183748 -555570 - L1MCa LINE L1 -5033 1531 1494 671 220 0 43 chr6_random 183765 183906 -555412 - FRAM SINE Alu -22 154 20 653 210 34 26 chr6_random 183915 184148 -555170 - L1MCa LINE L1 -5118 1446 1212 3200 29 5 0 chr6_random 184150 184529 -554789 - L1PA2 LINE L1 -3 6152 5772 4267 20 7 0 chr6_random 184529 185182 -554136 + L1PA2 LINE L1 5118 5777 -378 1059 236 99 63 chr6_random 185206 185809 -553509 - L1MCa LINE L1 -4851 1194 570 1149 286 88 0 chr6_random 186060 186389 -552929 + MLT1E2 LTR MaLR 136 493 -133 2298 159 20 32 chr6_random 187212 187651 -551667 - Tigger2a DNA MER2_type 0 434 1 207 0 0 0 chr6_random 187661 187684 -551634 + (CA)n Simple_repeat Simple_repeat 2 24 0 2442 84 59 3 chr6_random 188081 188436 -550882 - L1PA6 LINE L1 -5 6149 5775 1009 173 4 5 chr6_random 189124 189766 -549552 + ALR/Alpha Satellite centromeric 1 640 0 39540 63 3 1 chr6_random 189771 195908 -543410 + L1PA3 LINE L1 9 6155 0 995 174 1 3 chr6_random 195943 197562 -541756 + ALR/Alpha Satellite centromeric 1 1616 -26 6701 77 3 0 chr6_random 197559 198607 -540711 - L1PA3 LINE L1 -1 6154 5103 10100 46 1 1 chr6_random 198607 199922 -539396 + L1P LINE L1 3728 5042 -1104 1155 157 2 1 chr6_random 199922 201908 -537410 + ALR/Alpha Satellite centromeric 1 1987 -7 1209 147 4 1 chr6_random 201921 204462 -534856 + ALR/Alpha Satellite centromeric 1 2548 -7 1209 124 2 1 chr6_random 204475 205545 -533773 + ALR/Alpha Satellite centromeric 1 1070 -33 1049 160 3 1 chr6_random 205673 208480 -530838 + ALR/Alpha Satellite centromeric 1 2814 -26 22 0 0 0 chr6_random 208480 208502 -530816 + AT_rich Low_complexity Low_complexity 1 22 0 321 43 0 0 chr6_random 208502 208548 -530770 - L1PA3 LINE L1 0 6155 6110 644 34 11 0 chr6_random 208548 208637 -530681 + L1PA3 LINE L1 5952 6041 -114 1223 153 4 2 chr6_random 208637 213452 -525866 + ALR/Alpha Satellite centromeric 1 4824 -7 1029 173 4 0 chr6_random 213626 215189 -524129 + ALR/Alpha Satellite centromeric 1 1569 -4 16080 86 3 3 chr6_random 215290 217569 -521749 - L1P LINE L1 -3859 2287 9 1009 161 2 3 chr6_random 217574 218216 -521102 - ALR/Alpha Satellite centromeric 0 641 1 1075 165 4 1 chr6_random 218764 224009 -515309 + ALR/Alpha Satellite centromeric 1 5262 -68 21973 76 2 3 chr6_random 224023 227079 -512239 - L1P LINE L1 -3087 3059 7 1161 158 2 3 chr6_random 227091 231323 -507995 + ALR/Alpha Satellite centromeric 1 4226 0 1041 317 29 63 chr6_random 231571 232082 -507236 + L2 LINE L2 2820 3313 0 38430 60 3 5 chr6_random 232132 237364 -501954 + L1P LINE L1 1 5220 -926 9500 50 33 0 chr6_random 237464 239195 -500123 - L1PA4 LINE L1 -312 5843 4056 * 15685 54 1 0 chr6_random 239184 241299 -498019 + L1PA4 LINE L1 1927 4044 -2102 1429 200 3 32 chr6_random 242483 242768 -496550 - AluJo SINE Alu -10 302 26 25 0 0 0 chr6_random 242975 243000 -496318 + AT_rich Low_complexity Low_complexity 1 25 0 394 229 80 127 chr6_random 243808 244484 -494834 - HAL1b LINE L1 -20 1328 685 633 162 78 39 chr6_random 244575 244754 -494564 + MER53 DNA DNA 2 187 -2 409 248 0 41 chr6_random 245616 245761 -493557 + C-rich Low_complexity Low_complexity 1 139 0 1547 104 16 79 chr6_random 246047 246364 -492954 - L1P4 LINE L1 -608 5557 5261 2535 151 27 2 chr6_random 246364 246812 -492506 + L1PA15 LINE L1 5704 6163 -2 26 30 0 0 chr6_random 247329 247362 -491956 + AT_rich Low_complexity Low_complexity 1 33 0 189 147 0 0 chr6_random 248030 248064 -491254 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 21 36 0 0 chr6_random 248353 248381 -490937 + AT_rich Low_complexity Low_complexity 1 28 0 23 97 0 0 chr6_random 249668 249740 -489578 + AT_rich Low_complexity Low_complexity 1 72 0 655 203 155 37 chr6_random 250306 250493 -488825 + MIR SINE MIR 4 212 -50 10313 147 72 9 chr6_random 250972 252759 -486559 + Tigger1 DNA MER2_type 20 1919 -499 5803 21 0 0 chr6_random 252764 253436 -485882 + L1PA4 LINE L1 5306 5977 -178 1871 165 49 0 chr6_random 253539 253867 -485451 + Tigger1 DNA MER2_type 2075 2418 0 231 257 0 14 chr6_random 253867 253902 -485416 + LTR66 LTR ERVL 406 439 -171 2035 199 5 0 chr6_random 254608 255019 -484299 - L1PB4 LINE L1 -2 6154 5742 1654 179 14 10 chr6_random 255033 255324 -483994 - AluJb SINE Alu -20 292 1 2952 152 45 12 chr6_random 255342 255593 -483725 - L1MA9 LINE L1 -34 6278 6028 871 251 71 29 chr6_random 255593 255944 -483374 - L1PB4 LINE L1 -133 6023 5658 378 57 0 0 chr6_random 257026 257079 -482239 + (CA)n Simple_repeat Simple_repeat 1 53 0 770 270 47 33 chr6_random 257271 257571 -481747 + MER90 LTR ERV1 3 306 -308 214 139 93 0 chr6_random 257793 257836 -481482 + L2 LINE L2 3267 3313 0 467 345 12 6 chr6_random 258082 258247 -481071 + MIR3 SINE MIR 37 202 -6 201 108 0 0 chr6_random 259011 259048 -480270 + (CA)n Simple_repeat Simple_repeat 2 38 0 26 0 0 0 chr6_random 259189 259215 -480103 + AT_rich Low_complexity Low_complexity 1 26 0 243 0 0 0 chr6_random 259237 259264 -480054 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1354 216 21 79 chr6_random 259581 259960 -479358 - MLT1A1 LTR MaLR -8 357 1 27 0 0 0 chr6_random 260213 260240 -479078 + AT_rich Low_complexity Low_complexity 1 27 0 2357 183 34 13 chr6_random 260330 260926 -478392 + L1MA3 LINE L1 2874 3481 -2665 * 4705 207 62 17 chr6_random 260922 262826 -476492 + L1MA3 LINE L1 4234 6277 -28 243 274 48 24 chr6_random 262733 262857 -476461 + L1ME1 LINE L1 6035 6161 -5 * 2205 128 36 25 chr6_random 263567 263927 -475391 + THE1B LTR MaLR 1 364 0 332 70 0 0 chr6_random 263927 263970 -475348 + THE1B-int LTR MaLR 1 43 -1537 238 301 98 37 chr6_random 264009 264172 -475146 - MLT1K LTR MaLR -42 546 374 260 298 102 47 chr6_random 264912 265088 -474230 + MIR3 SINE MIR 14 196 -47 1165 291 68 6 chr6_random 265350 265676 -473642 + MER70A LTR ERVL 80 425 -47 972 185 60 15 chr6_random 266578 266617 -472701 + AluJo SINE Alu 82 118 -194 186 43 0 0 chr6_random 266617 266640 -472678 + (TAA)n Simple_repeat Simple_repeat 2 24 0 972 185 60 15 chr6_random 266640 266800 -472518 + AluJo SINE Alu 118 290 -22 253 285 83 72 chr6_random 267263 267649 -471669 + L1MC4a LINE L1 5615 6004 -1804 895 272 23 5 chr6_random 268254 268471 -470847 - MER58A DNA MER1_type -3 221 1 289 287 28 46 chr6_random 268573 268712 -470606 - LTR16A LTR ERVL -309 141 3 777 216 72 36 chr6_random 268731 268981 -470337 - L1MC4a LINE L1 -1317 6491 6233 7242 51 3 26 chr6_random 268982 270115 -469203 - L1PA5 LINE L1 0 6154 5031 6617 57 3 1 chr6_random 270336 271193 -468125 - L1PA5 LINE L1 -1101 5045 4187 1197 237 61 65 chr6_random 271203 271807 -467511 - L1MC4a LINE L1 -1589 6219 5618 351 354 12 21 chr6_random 271804 272143 -467175 - L1M4 LINE L1 -2284 3862 3527 * 1419 193 77 4 chr6_random 272611 272981 -466337 + AluSx SINE Alu 1 390 0 882 139 23 8 chr6_random 272985 273318 -466000 + GA-rich Low_complexity Low_complexity 1 337 0 1727 160 33 13 chr6_random 273319 273626 -465692 - MER7A DNA MER2_type -35 311 1 1388 226 58 39 chr6_random 273703 273911 -465407 - L1MD2 LINE L1 -10 6349 6146 2412 229 11 44 chr6_random 273911 274484 -464834 + MLT2B3 LTR ERVL 1 554 0 273 29 0 0 chr6_random 274484 274518 -464800 + (TG)n Simple_repeat Simple_repeat 2 35 0 1388 226 58 39 chr6_random 274518 274689 -464629 - L1MD2 LINE L1 -212 6147 5962 2170 236 67 46 chr6_random 274691 276062 -463256 - L1MD2 LINE L1 -743 5403 4132 2715 169 40 15 chr6_random 276108 276652 -462666 + MER74A LTR ERVL 1 558 0 419 292 125 13 chr6_random 276814 277270 -462048 - L1MD2 LINE L1 -3510 2636 2130 237 272 92 73 chr6_random 277765 278309 -461009 - HAL1b LINE L1 -779 569 16 988 159 58 88 chr6_random 278769 278995 -460323 - AluJo SINE Alu -14 298 80 2766 88 3 3 chr6_random 279542 279917 -459401 + THE1C LTR MaLR 1 375 0 257 128 21 0 chr6_random 281676 281723 -457595 + CT-rich Low_complexity Low_complexity 1 48 0 232 147 21 11 chr6_random 281853 281942 -457376 + CT-rich Low_complexity Low_complexity 1 89 0 488 309 40 0 chr6_random 282391 282540 -456778 + L2 LINE L2 2608 2762 -552 759 311 52 26 chr6_random 282618 282962 -456356 + MLT1J LTR MaLR 95 447 -64 396 125 0 0 chr6_random 282967 283031 -456287 + (GA)n Simple_repeat Simple_repeat 1 64 0 336 19 57 0 chr6_random 283031 283084 -456234 + (TA)n Simple_repeat Simple_repeat 2 57 0 339 299 0 0 chr6_random 283127 283214 -456104 - MLT1J LTR MaLR -330 181 95 591 257 42 0 chr6_random 283297 283441 -455877 - L2 LINE L2 -557 2757 2608 202 233 0 0 chr6_random 283689 283732 -455586 + (TATATG)n Simple_repeat Simple_repeat 6 48 0 734 311 152 17 chr6_random 283764 284242 -455076 + L2 LINE L2 2762 3297 -16 283 315 74 0 chr6_random 285410 285518 -453800 + L2 LINE L2 3189 3304 -9 216 0 0 0 chr6_random 285653 285677 -453641 + (A)n Simple_repeat Simple_repeat 1 24 0 246 62 0 0 chr6_random 286000 286032 -453286 + (T)n Simple_repeat Simple_repeat 1 32 0 1561 128 0 0 chr6_random 286046 286264 -453054 - AluSx SINE Alu -94 218 1 1444 290 45 44 chr6_random 287104 288245 -451073 + L1M4 LINE L1 1 1149 -4752 18681 81 9 0 chr6_random 288249 290720 -448598 + L1P LINE L1 2 2495 -3651 5637 112 113 91 chr6_random 290722 292217 -447101 + pTR5 LTR ERV1 743 2438 0 32511 92 3 11 chr6_random 292220 297203 -442115 + HERV9 LTR ERV1 1 4944 -3455 665 130 235 12 chr6_random 297204 297451 -441867 + HERV9 LTR ERV1 840 1141 -5755 356 161 0 0 chr6_random 297449 297511 -441807 + HERV9 LTR ERV1 7503 7564 -835 * 6277 106 71 56 chr6_random 297507 299457 -439861 + pTR5 LTR ERV1 66 8399 0 24696 42 2 1 chr6_random 299461 303112 -436206 + L1PA4 LINE L1 2501 6151 -4 434 202 0 19 chr6_random 303112 303216 -436102 + L1M4 LINE L1 2742 2843 -3127 * 1032 212 50 17 chr6_random 303209 303450 -435868 + L1P LINE L1 3698 3946 -2200 690 304 14 0 chr6_random 303486 303703 -435615 + L1MB1 LINE L1 2418 2637 -3333 555 208 35 0 chr6_random 303707 303851 -435467 + L1MB1 LINE L1 4284 4432 -1538 3597 166 91 10 chr6_random 303872 304472 -434846 + L1MB1 LINE L1 4598 5148 -844 2006 160 7 0 chr6_random 304472 304778 -434540 + AluJo SINE Alu 3 310 -2 3597 166 91 10 chr6_random 304778 305370 -433948 + L1MB1 LINE L1 5148 5879 -113 1061 203 5 0 chr6_random 305626 305828 -433490 + AluJb SINE Alu 110 312 0 732 121 0 16 chr6_random 305836 305972 -433346 + L1MB1 LINE L1 5884 5992 0 3558 206 59 65 chr6_random 306959 307652 -431666 - L1MD2 LINE L1 -1 6241 5545 2143 123 3 16 chr6_random 307652 307968 -431350 + AluSx SINE Alu 1 312 0 3558 206 59 65 chr6_random 307968 308484 -430834 - L1MD2 LINE L1 -697 5545 5027 336 140 60 90 chr6_random 308502 308602 -430716 - L1MB2 LINE L1 -1 6170 6074 * 32201 103 24 20 chr6_random 308598 314349 -424969 + L1P2 LINE L1 165 6009 -460 225 211 0 0 chr6_random 314560 314612 -424706 + (CA)n Simple_repeat Simple_repeat 1 52 0 536 127 0 13 chr6_random 315328 315407 -423911 - AluJb SINE Alu -39 273 196 227 192 101 91 chr6_random 315448 315547 -423771 - MIR SINE MIR -155 107 8 496 141 14 0 chr6_random 316058 316146 -423172 + L1MC4 LINE L1 6868 7032 -851 540 303 17 29 chr6_random 316735 316910 -422408 + MER5B DNA MER1_type 3 175 -3 267 253 24 12 chr6_random 317115 317198 -422120 + MLT1G1 LTR MaLR 100 183 -412 1936 112 6 70 chr6_random 317202 317514 -421804 + AluSg SINE Alu 1 292 -18 266 276 32 57 chr6_random 317556 317679 -421639 + MLT1G1 LTR MaLR 173 292 -298 1625 227 72 8 chr6_random 317679 318080 -421238 - MER95 LTR ERV -4 427 1 3540 197 20 30 chr6_random 318107 318553 -420765 - L1 LINE L1 -955 6610 6161 3012 110 52 9 chr6_random 318553 319000 -420318 - L1PA11 LINE L1 0 6174 5709 3540 197 20 30 chr6_random 319000 320125 -419193 - L1 LINE L1 -1404 6161 3083 1372 112 41 0 chr6_random 320125 320321 -418997 - LTR12 LTR ERV1 -134 580 377 328 299 17 0 chr6_random 320322 320439 -418879 - LTR30 LTR ERV1 -80 642 524 873 132 132 0 chr6_random 320439 320605 -418713 - LTR12 LTR ERV1 -432 2006 2 4316 120 8 0 chr6_random 320606 321224 -418094 - HERV9 LTR ERV1 0 8399 7777 713 44 0 0 chr6_random 321223 321314 -418004 + Harlequin LTR ERV1 1630 1720 -5176 * 2017 112 0 38 chr6_random 321333 321647 -417671 - HERV17 LTR ERV1 -7059 1567 1266 1857 126 30 21 chr6_random 321661 322271 -417047 - HERV17 LTR ERV1 -3414 4985 703 * 12283 97 9 7 chr6_random 322270 323963 -415355 - HERV17 LTR ERV1 -5427 2972 1276 1497 91 359 165 chr6_random 323966 324475 -414843 - LTR12 LTR ERV1 -130 584 1 612 284 60 5 chr6_random 324476 324694 -414624 - L1 LINE L1 -4479 3086 2857 2476 126 51 0 chr6_random 324695 325069 -414249 - L1PA14 LINE L1 0 6161 5769 41444 51 23 3 chr6_random 325072 331095 -408223 - L1PA3 LINE L1 0 6155 8 2294 69 6 38 chr6_random 332370 332688 -406630 - AluY SINE Alu 0 311 4 2298 116 3 0 chr6_random 332904 333214 -406104 + AluSx SINE Alu 1 311 -1 307 352 20 15 chr6_random 334426 334625 -404693 - MER89-int LTR ERV1 -5429 1372 1173 1549 247 56 2 chr6_random 335477 335886 -403432 - MER95 LTR ERV 0 431 1 1089 234 9 0 chr6_random 335960 336187 -403131 + MLT1H1 LTR MaLR 327 555 0 21 36 0 0 chr6_random 336594 336622 -402696 + AT_rich Low_complexity Low_complexity 1 28 0 370 199 24 145 chr6_random 336761 336927 -402391 + MLT1E1 LTR MaLR 6 151 -503 4421 135 15 126 chr6_random 336927 338465 -400853 + pTR5 LTR ERV1 753 2606 0 1519 249 43 0 chr6_random 338493 338843 -400475 + MLT1E1 LTR MaLR 288 652 -2 296 264 142 28 chr6_random 338911 339017 -400301 + MLT1J LTR MaLR 347 541 -74 16073 59 34 5 chr6_random 339608 341839 -397479 - L1P LINE L1 -2226 3920 1624 25361 78 12 3 chr6_random 341995 346191 -393127 + L1PA7 LINE L1 1917 6149 -5 396 161 103 0 chr6_random 347538 347625 -391693 - MER94 DNA DNA -37 97 2 216 97 0 0 chr6_random 347647 347678 -391640 + (A)n Simple_repeat Simple_repeat 1 31 0 762 298 28 16 chr6_random 347884 348136 -391182 + MIR SINE MIR 8 262 0 1577 171 18 11 chr6_random 348736 349010 -390308 - AluJo SINE Alu -30 282 7 22 35 0 0 chr6_random 349355 349384 -389934 + AT_rich Low_complexity Low_complexity 1 29 0 23 33 0 0 chr6_random 350764 350794 -388524 + AT_rich Low_complexity Low_complexity 1 30 0 273 329 167 13 chr6_random 353996 354224 -385094 + L3 LINE CR1 1179 1441 -136 183 176 0 0 chr6_random 354219 354253 -385065 + MIR3 SINE MIR 172 205 -3 * 358 328 40 34 chr6_random 354812 354989 -384329 - MER5B DNA MER1_type 0 178 1 23 0 0 0 chr6_random 354990 355013 -384305 + AT_rich Low_complexity Low_complexity 1 23 0 462 332 137 9 chr6_random 355024 355235 -384083 - MIR SINE MIR -15 247 10 22 0 0 0 chr6_random 355801 355823 -383495 + AT_rich Low_complexity Low_complexity 1 22 0 207 0 0 0 chr6_random 355947 355970 -383348 + (A)n Simple_repeat Simple_repeat 1 23 0 25 31 0 0 chr6_random 357198 357230 -382088 + AT_rich Low_complexity Low_complexity 1 32 0 244 327 37 28 chr6_random 357396 357503 -381815 - MER5A DNA MER1_type -75 114 7 181 219 62 52 chr6_random 357785 357881 -381437 + L3b LINE CR1 1270 1366 -217 255 217 0 0 chr6_random 362626 362686 -376632 + GA-rich Low_complexity Low_complexity 1 60 0 257 353 0 33 chr6_random 362701 362823 -376495 + GA-rich Low_complexity Low_complexity 1 118 0 23 33 0 0 chr6_random 363851 363881 -375437 + AT_rich Low_complexity Low_complexity 1 30 0 282 154 0 0 chr6_random 365121 365173 -374145 - L1MB1 LINE L1 -2 6166 6115 458 17 17 0 chr6_random 365298 365357 -373961 + (CA)n Simple_repeat Simple_repeat 2 61 0 359 273 116 20 chr6_random 365603 365801 -373517 + LTR48 LTR ERV1 522 738 -49 219 167 0 0 chr6_random 366117 366159 -373159 + (CA)n Simple_repeat Simple_repeat 2 43 0 1280 260 15 31 chr6_random 366177 366631 -372687 + L1MC5 LINE L1 6999 7445 -516 2035 102 68 7 chr6_random 366644 366937 -372381 - AluSq SINE Alu -2 311 1 1249 230 6 25 chr6_random 367315 367632 -371686 + AluJo SINE Alu 1 311 -1 255 345 125 26 chr6_random 367916 368180 -371138 + L2 LINE L2 2082 2371 -943 193 147 29 0 chr6_random 368459 368493 -370825 + MIR SINE MIR 120 154 -108 509 275 100 30 chr6_random 368623 368823 -370495 - MIR SINE MIR -45 217 4 2109 178 48 11 chr6_random 369794 370227 -369091 + MER66A LTR ERV1 27 475 -3 190 233 0 0 chr6_random 371651 371694 -367624 - L2 LINE L2 0 3313 3271 309 51 0 0 chr6_random 372608 372647 -366671 + (CA)n Simple_repeat Simple_repeat 2 40 0 3507 74 17 11 chr6_random 372792 373267 -366051 + L1PA10 LINE L1 5680 6157 -11 274 262 101 118 chr6_random 373551 373788 -365530 + L2 LINE L2 3013 3245 -68 7222 23 2 0 chr6_random 374290 375130 -364188 + L1PA4 LINE L1 5312 6153 -2 478 265 64 64 chr6_random 375273 375492 -363826 - MER112 DNA MER1_type -12 248 30 23 33 0 0 chr6_random 375870 375900 -363418 + AT_rich Low_complexity Low_complexity 1 30 0 421 359 53 6 chr6_random 375942 376262 -363056 + L1MC4a LINE L1 5563 5897 -1911 709 271 117 107 chr6_random 376461 377368 -361950 - L1MEd LINE L1 -5193 926 11 808 253 32 5 chr6_random 377738 377924 -361394 + MER20 DNA MER1_type 7 197 -22 1737 105 0 0 chr6_random 378812 379040 -360278 - AluSq SINE Alu -65 248 21 661 259 26 26 chr6_random 379243 379436 -359882 + MIR SINE MIR 8 200 -62 23 0 0 0 chr6_random 379479 379502 -359816 + AT_rich Low_complexity Low_complexity 1 23 0 1749 197 34 51 chr6_random 379898 380366 -358952 + MER65C LTR ERV1 2 461 0 302 0 26 0 chr6_random 380566 380604 -358714 + (TTA)n Simple_repeat Simple_repeat 2 40 0 1303 139 0 0 chr6_random 380605 380792 -358526 - AluSg/x SINE Alu -32 280 94 2227 100 0 7 chr6_random 381961 382270 -357048 - AluSc SINE Alu -2 307 1 573 87 0 22 chr6_random 382686 382778 -356540 + L1PA8 LINE L1 6083 6172 0 288 53 0 0 chr6_random 382899 382937 -356381 + (TTCA)n Simple_repeat Simple_repeat 4 41 0 362 139 14 0 chr6_random 383005 383077 -356241 + CT-rich Low_complexity Low_complexity 2 74 0 258 81 0 0 chr6_random 383079 383116 -356202 + (CA)n Simple_repeat Simple_repeat 1 37 0 193 297 0 68 chr6_random 384538 384612 -354706 + MIR3 SINE MIR 11 79 -129 231 125 0 0 chr6_random 385804 385844 -353474 + (A)n Simple_repeat Simple_repeat 1 40 0 2242 107 0 3 chr6_random 385870 386169 -353149 + AluSg SINE Alu 1 298 -12 562 218 27 0 chr6_random 386651 386761 -352557 + MER20 DNA MER1_type 1 113 -106 1747 199 35 42 chr6_random 386793 387245 -352073 - MLT1C LTR MaLR -13 454 6 518 188 69 0 chr6_random 387253 387354 -351964 + MER20 DNA MER1_type 112 219 0 1286 220 105 15 chr6_random 388255 389189 -350129 - L1MC4 LINE L1 -139 7903 6735 487 277 58 25 chr6_random 389255 389497 -349821 - L1MC4 LINE L1 -1333 6709 6460 1905 160 0 0 chr6_random 390059 390346 -348972 + AluJb SINE Alu 1 287 -25 207 100 0 0 chr6_random 390349 390379 -348939 + (TGAA)n Simple_repeat Simple_repeat 3 32 0 651 162 14 9 chr6_random 390379 390691 -348627 - L1MC4 LINE L1 -469 7339 6870 226 192 101 91 chr6_random 391205 391304 -348014 + MIR SINE MIR 8 107 -155 499 133 0 0 chr6_random 391349 391424 -347894 + AluJb SINE Alu 199 273 -39 207 220 0 0 chr6_random 392140 392190 -347128 + (TG)n Simple_repeat Simple_repeat 1 50 0 2417 77 3 0 chr6_random 394110 394420 -344898 - AluSp SINE Alu -2 311 1 225 94 0 0 chr6_random 394545 394577 -344741 + (TG)n Simple_repeat Simple_repeat 1 32 0 1381 186 10 53 chr6_random 395062 395363 -343955 + AluJo SINE Alu 18 305 -7 545 303 17 29 chr6_random 395480 395655 -343663 - MER5B DNA MER1_type -3 175 3 511 133 0 0 chr6_random 396318 396393 -342925 - AluJb SINE Alu -39 273 199 186 209 99 99 chr6_random 396442 396533 -342785 - MIR SINE MIR -164 98 8 644 163 16 0 chr6_random 397050 397188 -342130 + L1MC4 LINE L1 6868 7073 -795 524 226 30 0 chr6_random 397187 397320 -341998 + L1MC4a LINE L1 7159 7295 -513 * 207 100 0 0 chr6_random 397362 397392 -341926 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 1921 160 0 0 chr6_random 397395 397682 -341636 - AluJb SINE Alu -25 287 1 436 252 58 0 chr6_random 398245 398384 -340934 + L1MC4 LINE L1 6460 6606 -1436 195 150 0 80 chr6_random 398439 398539 -340779 + (TATATG)n Simple_repeat Simple_repeat 6 97 0 1825 162 20 6 chr6_random 398553 398904 -340414 + L1MC4 LINE L1 6735 7090 -952 1145 253 160 17 chr6_random 398905 399486 -339832 + L1MC4 LINE L1 7240 7903 -139 486 188 69 0 chr6_random 400388 400489 -338829 - MER20 DNA MER1_type 0 219 112 1605 208 31 38 chr6_random 400497 400949 -338369 + MLT1C LTR MaLR 6 454 -13 523 218 27 0 chr6_random 400981 401091 -338227 - MER20 DNA MER1_type -106 113 1 2260 107 0 3 chr6_random 401575 401874 -337444 - AluSg SINE Alu -12 298 1 240 122 0 0 chr6_random 401900 401941 -337377 + (T)n Simple_repeat Simple_repeat 1 41 0 1537 208 6 10 chr6_random 403068 403381 -335937 + AluJo SINE Alu 1 312 0 318 259 16 3 chr6_random 453892 454005 -285313 - L1MD2 LINE L1 -45 7950 6195 780 224 58 22 chr6_random 454015 454238 -285080 - L1MD2 LINE L1 -226 6133 5903 398 315 46 23 chr6_random 454833 455049 -284269 + MIR SINE MIR 37 257 -5 998 193 66 0 chr6_random 455357 455538 -283780 + AluJo SINE Alu 85 277 -35 1418 178 58 6 chr6_random 456147 456473 -282845 + MER33 DNA MER1_type 1 324 0 21 0 0 0 chr6_random 458900 458921 -280397 + AT_rich Low_complexity Low_complexity 1 21 0 310 224 12 35 chr6_random 458926 459011 -280307 + L1MCa LINE L1 1992 2074 -4352 255 77 64 13 chr6_random 459086 459164 -280154 + (TA)n Simple_repeat Simple_repeat 1 82 0 1620 201 28 45 chr6_random 459210 459607 -279711 - MLT1B LTR MaLR 0 390 1 26 50 0 0 chr6_random 459644 459684 -279634 + AT_rich Low_complexity Low_complexity 1 40 0 2227 110 17 0 chr6_random 460308 460607 -278711 + AluSx SINE Alu 1 304 -8 630 295 48 31 chr6_random 460895 461122 -278196 + MIR SINE MIR 14 244 -18 396 328 115 45 chr6_random 461272 461879 -277439 - L2 LINE L2 -823 2491 1842 25 0 0 0 chr6_random 461884 461909 -277409 + AT_rich Low_complexity Low_complexity 1 25 0 964 97 0 0 chr6_random 462009 462143 -277175 - AluSg/x SINE Alu 0 310 177 6481 46 7 1 chr6_random 462296 463115 -276203 - L1P LINE L1 -914 5232 4409 405 303 118 26 chr6_random 463663 463891 -275427 + MIR SINE MIR 14 262 0 1833 192 29 16 chr6_random 464195 464551 -274767 + MLT1A1 LTR MaLR 1 364 -1 357 226 81 24 chr6_random 465365 465489 -273829 - L1ME4a LINE L1 -6 6115 5985 512 135 22 0 chr6_random 465532 465621 -273697 + L1MA6 LINE L1 6210 6300 0 321 357 93 15 chr6_random 465706 465975 -273343 - L1ME4a LINE L1 -316 5850 5561 22 35 0 0 chr6_random 467281 467310 -272008 + AT_rich Low_complexity Low_complexity 1 29 0 338 378 78 17 chr6_random 467376 467556 -271762 + MER91A DNA MER1_type 1 191 -5 504 298 43 55 chr6_random 467636 467891 -271427 + MLT1J LTR MaLR 1 252 -259 4005 158 9 9 chr6_random 468710 469845 -269473 + L1MA4 LINE L1 4811 5941 -359 228 241 0 0 chr6_random 469903 469961 -269357 + (CATA)n Simple_repeat Simple_repeat 3 60 0 1653 66 0 0 chr6_random 470358 470571 -268747 + L1PA5 LINE L1 5935 6147 -7 782 159 119 13 chr6_random 470648 470799 -268519 - FAM SINE Alu -8 167 1 235 257 200 7 chr6_random 470873 471013 -268305 + L1PB4 LINE L1 5391 5557 -743 13579 134 47 18 chr6_random 471121 473386 -265932 - Tigger2 DNA MER2_type -2 2716 386 792 171 15 93 chr6_random 473391 473596 -265722 + L1PB4 LINE L1 5965 6153 -3 2173 144 25 13 chr6_random 473603 474000 -265318 - Tigger2 DNA MER2_type -2315 403 2 1537 187 54 3 chr6_random 474002 474317 -265001 + MER46B DNA MER2_type 23 228 -8 1521 181 45 21 chr6_random 475109 475396 -263922 - AluJo SINE Alu -13 299 6 213 311 72 18 chr6_random 475565 475732 -263586 + L2 LINE L2 2740 2915 -399 556 241 108 6 chr6_random 476151 476309 -263009 + MIR SINE MIR 82 255 -7 241 358 48 36 chr6_random 476400 476565 -262753 - L3 LINE CR1 -706 871 705 243 298 107 16 chr6_random 477815 477936 -261382 - L2 LINE L2 0 3272 3141 25 0 0 0 chr6_random 478406 478431 -260887 + AT_rich Low_complexity Low_complexity 1 25 0 351 302 9 35 chr6_random 482227 482343 -256975 + MIR3 SINE MIR 65 177 -31 21 0 0 0 chr6_random 483235 483256 -256062 + AT_rich Low_complexity Low_complexity 1 21 0 809 164 0 22 chr6_random 483322 483456 -255862 + AluJo SINE Alu 1 131 -171 375 215 125 69 chr6_random 484582 484726 -254592 - MER5B DNA MER1_type -5 173 22 2228 125 22 25 chr6_random 484857 485218 -254100 + THE1B LTR MaLR 5 364 0 507 202 168 8 chr6_random 485299 485418 -253900 - MER5B DNA MER1_type -39 139 2 1026 173 12 0 chr6_random 485454 485627 -253691 + AluJo SINE Alu 134 308 -4 399 157 0 0 chr6_random 485628 485698 -253620 + GA-rich Low_complexity Low_complexity 4 73 0 1025 99 11 17 chr6_random 485700 485881 -253437 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 191 163 0 23 chr6_random 485883 485926 -253392 + GA-rich Low_complexity Low_complexity 2 43 0 422 114 14 0 chr6_random 486026 486096 -253222 + (GAAA)n Simple_repeat Simple_repeat 2 72 0 241 323 65 0 chr6_random 486666 486759 -252559 - MER81 DNA DNA -15 99 1 37 23 0 0 chr6_random 487462 487506 -251812 + AT_rich Low_complexity Low_complexity 1 44 0 706 227 95 62 chr6_random 487770 488043 -251275 + LTR33A LTR ERVL 218 499 -24 811 302 35 31 chr6_random 488056 488596 -250722 - L1M4 LINE L1 -2158 3988 3447 1257 296 102 56 chr6_random 488613 489763 -249555 - L1MEd LINE L1 -4915 1204 2 484 275 55 25 chr6_random 490006 490206 -249112 - L1ME LINE L1 -509 5612 5407 25 0 0 0 chr6_random 490266 490291 -249027 + AT_rich Low_complexity Low_complexity 1 25 0 222 62 0 0 chr6_random 491032 491064 -248254 + (A)n Simple_repeat Simple_repeat 1 32 0 894 223 26 43 chr6_random 491935 492168 -247150 + AluJo SINE Alu 1 229 -83 1972 153 51 17 chr6_random 492181 492533 -246785 + THE1B LTR MaLR 1 364 0 10233 84 7 4 chr6_random 492533 494105 -245213 + THE1B-int LTR MaLR 1 1579 -1 1962 107 123 18 chr6_random 494105 494431 -244887 + THE1B LTR MaLR 5 364 0 286 193 0 0 chr6_random 494431 494488 -244830 + Alu SINE Alu 246 302 0 461 333 73 8 chr6_random 494650 494884 -244434 + MLT1L LTR MaLR 360 608 -7 26 50 0 0 chr6_random 495548 495588 -243730 + AT_rich Low_complexity Low_complexity 1 40 0 195 321 37 73 chr6_random 496587 496696 -242622 + L2 LINE L2 3168 3272 0 24 32 0 0 chr6_random 497982 498013 -241305 + AT_rich Low_complexity Low_complexity 1 31 0 297 308 149 0 chr6_random 498739 498846 -240472 + MIR3 SINE MIR 42 164 -44 2591 106 5 11 chr6_random 499529 499906 -239412 - THE1C LTR MaLR 0 375 1 302 331 87 8 chr6_random 500380 500507 -238811 + MIR3 SINE MIR 61 197 -11 440 286 60 76 chr6_random 501055 501370 -237948 + MER46C DNA MER2_type 8 317 -21 2350 91 0 0 chr6_random 501896 502203 -237115 - AluY SINE Alu -4 307 1 296 237 122 20 chr6_random 502353 502487 -236831 + MLT1J1 LTR MaLR 245 412 -19 265 184 0 0 chr6_random 502542 502591 -236727 - MLT1J2 LTR MaLR -379 71 23 28 29 0 0 chr6_random 503077 503112 -236206 + AT_rich Low_complexity Low_complexity 1 35 0 189 373 0 0 chr6_random 503460 503527 -235791 + MIR SINE MIR 49 115 -93 504 189 21 0 chr6_random 503907 504002 -235316 - FLAM_A SINE Alu -26 116 20 2132 149 8 3 chr6_random 504607 504975 -234343 - L1PB3 LINE L1 -2 6152 5783 377 165 0 13 chr6_random 504978 505057 -234261 + (TA)n Simple_repeat Simple_repeat 1 78 0 374 148 0 0 chr6_random 505057 505118 -234200 - L1PB3 LINE L1 -360 5791 5731 36 0 0 0 chr6_random 506011 506047 -233271 + AT_rich Low_complexity Low_complexity 1 36 0 206 320 39 29 chr6_random 506054 506157 -233161 + MIR SINE MIR 38 141 -121 852 116 31 8 chr6_random 510280 510409 -228909 + AluSq/x SINE Alu 1 132 -180 374 249 133 23 chr6_random 512118 512291 -227027 - L1 LINE L1 -2582 3564 3373 * 2048 181 30 37 chr6_random 512289 512866 -226452 + L1MA9 LINE L1 5622 6290 -22 191 237 184 0 chr6_random 512928 513004 -226314 + MIR3 SINE MIR 114 203 -5 7313 57 3 1 chr6_random 513143 514078 -225240 + L1P LINE L1 3977 4913 -1233 632 175 25 12 chr6_random 514179 514339 -224979 + CT-rich Low_complexity Low_complexity 3 164 0 465 204 21 18 chr6_random 514367 514634 -224684 + CT-rich Low_complexity Low_complexity 1 267 0 2156 115 7 0 chr6_random 515171 515466 -223852 - AluSx SINE Alu -15 297 1 850 244 15 5 chr6_random 515545 515750 -223568 + MER63A DNA MER1_type 4 210 0 182 364 11 11 chr6_random 515939 516027 -223291 - L2 LINE L2 -1 3312 3225 430 333 5 58 chr6_random 516371 516560 -222758 + MLT1K LTR MaLR 141 319 -269 2379 97 0 0 chr6_random 516618 516927 -222391 + AluSc SINE Alu 1 309 0 2338 71 0 0 chr6_random 517496 517801 -221517 - AluY SINE Alu 0 307 3 457 254 90 53 chr6_random 517803 517992 -221326 - MIR SINE MIR 0 262 67 1662 160 44 24 chr6_random 518245 518539 -220779 + AluJb SINE Alu 1 300 -12 2283 133 11 6 chr6_random 518930 519291 -220027 - MER47A DNA MER2_type 0 366 4 2034 115 0 4 chr6_random 519481 519791 -219527 - AluSx SINE Alu 0 343 35 21 57 0 0 chr6_random 519791 519826 -219492 + AT_rich Low_complexity Low_complexity 1 35 0 507 261 81 14 chr6_random 519871 520154 -219164 + L1ME LINE L1 5258 5559 -605 2424 71 3 3 chr6_random 520683 520994 -218324 - AluY SINE Alu 0 311 1 2112 105 7 7 chr6_random 521370 521665 -217653 + AluSq SINE Alu 1 295 -18 2611 147 56 7 chr6_random 521933 522395 -216923 + MER31A LTR ERV1 1 485 0 721 224 56 119 chr6_random 522442 522728 -216590 + MER31A-int LTR ERV1 15 282 -4654 630 228 19 70 chr6_random 522706 522921 -216397 + MER31A-int LTR ERV1 201 404 -4532 * 974 183 119 87 chr6_random 523069 523250 -216068 + MER31A-int LTR ERV1 887 1061 -3875 1878 120 63 3 chr6_random 523250 523534 -215784 - AluSx SINE Alu -11 301 1 974 183 119 87 chr6_random 523534 523756 -215562 + MER31A-int LTR ERV1 1061 1303 -3633 656 256 23 28 chr6_random 523741 523956 -215362 + MER31A-int LTR ERV1 1909 2122 -2749 * 9984 177 69 50 chr6_random 524028 525746 -213572 + MER31A-int LTR ERV1 2373 4106 -830 1996 117 3 7 chr6_random 525746 526036 -213282 + AluSg SINE Alu 10 298 -12 9984 177 69 50 chr6_random 526036 526857 -212461 + MER31A-int LTR ERV1 4106 4910 -26 2436 151 67 2 chr6_random 526863 527280 -212038 + MER31A LTR ERV1 1 444 -41 2717 131 7 16 chr6_random 527280 527716 -211602 - MSTB1 LTR MaLR 0 432 1 2301 88 10 0 chr6_random 527726 528021 -211297 - AluSx SINE Alu -14 298 1 590 341 64 55 chr6_random 528374 529188 -210130 + HERVL LTR ERVL 4160 5019 -745 1279 117 6 0 chr6_random 529328 529507 -209811 + AluSg/x SINE Alu 130 309 -3 1667 120 19 0 chr6_random 529518 529776 -209542 + L1MC2 LINE L1 5717 5979 -365 858 172 31 22 chr6_random 530485 530803 -208515 + L1MC2 LINE L1 5921 6342 -2 331 194 42 0 chr6_random 530866 530938 -208380 + HERVL LTR ERVL 5226 5300 -464 725 269 24 124 chr6_random 531391 531931 -207387 + LTR67 LTR ERVL 47 532 -25 2235 117 0 0 chr6_random 532111 532411 -206907 + AluSx SINE Alu 1 300 -12 1386 151 0 13 chr6_random 533017 533242 -206076 + AluJo SINE Alu 86 307 -5 23 0 0 0 chr6_random 533893 533916 -205402 + AT_rich Low_complexity Low_complexity 1 23 0 2062 179 14 11 chr6_random 534254 534618 -204700 + MLT1A1 LTR MaLR 1 365 0 24 0 0 0 chr6_random 536262 536286 -203032 + AT_rich Low_complexity Low_complexity 1 24 0 513 311 94 56 chr6_random 536687 537019 -202299 - L1MC4a LINE L1 -1875 5933 5568 2907 119 20 2 chr6_random 537019 537465 -201853 - L1PA16 LINE L1 -9 6157 5704 513 311 94 56 chr6_random 537465 537717 -201601 - L1MC4a LINE L1 -2240 5568 5327 2190 110 3 0 chr6_random 537809 538101 -201217 + AluSc SINE Alu 1 293 -16 23 0 0 0 chr6_random 538873 538896 -200422 + AT_rich Low_complexity Low_complexity 1 23 0 224 346 59 15 chr6_random 539068 539204 -200114 - MIR SINE MIR -109 153 12 230 258 0 0 chr6_random 539916 539978 -199340 + A-rich Low_complexity Low_complexity 1 62 0 26 50 0 0 chr6_random 540226 540266 -199052 + AT_rich Low_complexity Low_complexity 1 40 0 408 342 98 56 chr6_random 540428 540785 -198533 + L2 LINE L2 2895 3266 -6 21 0 0 0 chr6_random 541427 541448 -197870 + AT_rich Low_complexity Low_complexity 1 21 0 1751 132 3 30 chr6_random 543727 544022 -195296 - AluSx SINE Alu -25 287 1 307 304 74 0 chr6_random 544419 544567 -194751 + MER103 DNA DNA 8 166 0 245 212 0 15 chr6_random 546911 546977 -192341 + (TA)n Simple_repeat Simple_repeat 2 66 0 772 211 0 124 chr6_random 547012 547230 -192088 - MER77 LTR ERV1 -414 191 1 409 98 0 0 chr6_random 547476 547537 -191781 + MER41B LTR ERV1 487 547 -88 26 0 0 0 chr6_random 548683 548709 -190609 + AT_rich Low_complexity Low_complexity 1 26 0 1634 105 0 0 chr6_random 549902 550112 -189206 + AluSc SINE Alu 3 212 -97 246 81 0 0 chr6_random 550113 550150 -189168 + (TAAAAA)n Simple_repeat Simple_repeat 4 40 0 2106 139 0 0 chr6_random 551298 551593 -187725 + AluSx SINE Alu 1 295 -17 2456 122 5 22 chr6_random 551618 551988 -187330 + THE1B LTR MaLR 1 364 0 10556 104 3 63 chr6_random 551994 553672 -185646 + THE1B-int LTR MaLR 4 1580 0 2228 138 11 6 chr6_random 553672 554034 -185284 + THE1B LTR MaLR 1 364 0 254 316 95 44 chr6_random 554425 554583 -184735 + MIR SINE MIR 10 175 -87 268 302 180 16 chr6_random 555135 555324 -183994 + HAL1 LINE L1 306 525 -1982 761 229 7 0 chr6_random 555324 555468 -183850 - MER45A DNA AcHobo 0 178 34 2037 272 142 15 chr6_random 555573 556625 -182693 + HAL1 LINE L1 626 1810 -697 559 249 105 71 chr6_random 556745 557183 -182135 + HAL1 LINE L1 1715 2167 -340 494 286 92 66 chr6_random 557228 557532 -181786 + L1ME LINE L1 3807 4118 -2028 409 284 91 48 chr6_random 557554 557762 -181556 + LTR67 LTR ERVL 9 225 -332 341 343 22 0 chr6_random 558051 558188 -181130 + L1ME LINE L1 4177 4316 -1830 453 270 98 23 chr6_random 558312 558619 -180699 + L1ME LINE L1 4490 4819 -1327 1987 156 3 0 chr6_random 558905 559207 -180111 + AluSx SINE Alu 1 303 -9 4722 228 13 16 chr6_random 560020 561055 -178263 - MER45B DNA AcHobo -2 1038 8 191 114 29 0 chr6_random 561493 561528 -177790 + (TAAA)n Simple_repeat Simple_repeat 3 38 0 27 29 0 0 chr6_random 561710 561744 -177574 + AT_rich Low_complexity Low_complexity 1 34 0 43050 48 2 1 chr6_random 561744 567883 -171435 - L1PA3 LINE L1 -5 6150 4 688 132 0 53 chr6_random 568779 568893 -170425 - AluSq/x SINE Alu -204 108 1 259 258 108 43 chr6_random 568903 569038 -170280 + L1ME LINE L1 5525 5677 -444 2073 146 30 28 chr6_random 569038 569401 -169917 - THE1B LTR MaLR 0 364 1 259 258 108 43 chr6_random 569401 569451 -169867 + L1ME LINE L1 5677 5722 -399 515 324 82 14 chr6_random 569451 569670 -169648 + MIR SINE MIR 18 251 -11 25 20 0 59 chr6_random 569979 570030 -169288 + AT_rich Low_complexity Low_complexity 1 48 0 383 308 39 0 chr6_random 570697 570801 -168517 - L2 LINE L2 -2 3311 3204 319 303 32 112 chr6_random 570863 571051 -168267 - MIR SINE MIR -72 190 18 440 227 25 8 chr6_random 571855 571974 -167344 - MLT2F LTR ERVL 0 663 543 486 270 94 117 chr6_random 572069 572506 -166812 - MLT1J LTR MaLR -6 505 79 384 22 0 0 chr6_random 572506 572551 -166767 + (TAA)n Simple_repeat Simple_repeat 2 46 0 2395 86 0 0 chr6_random 572618 572932 -166386 + L1PA4 LINE L1 1 314 -5832 * 36890 52 6 2 chr6_random 572931 578485 -160833 + L1PA4 LINE L1 585 6155 0 230 243 71 50 chr6_random 578488 578628 -160690 - Charlie7 DNA MER1_type -2469 143 1 204 239 0 0 chr6_random 578935 578981 -160337 + (CATA)n Simple_repeat Simple_repeat 2 47 0 270 313 0 0 chr6_random 580998 581065 -158253 + polypyrimidine Low_complexity Low_complexity 2 68 0 1860 161 10 0 chr6_random 581278 581576 -157742 - AluJb SINE Alu -11 301 1 2253 182 57 40 chr6_random 581833 582376 -156942 - MLT2B3 LTR ERVL 0 554 3 206 298 0 0 chr6_random 582429 582476 -156842 - L2 LINE L2 -7 3265 3219 234 184 0 0 chr6_random 582593 582631 -156687 - MER2 DNA MER2_type -307 38 1 562 180 98 16 chr6_random 582648 582770 -156548 + MLT2F LTR ERVL 7 138 -525 5226 202 16 12 chr6_random 582797 583989 -155329 + L1 LINE L1 2966 4162 -1984 4989 169 10 8 chr6_random 584016 585100 -154218 + L1PA16 LINE L1 5080 6166 0 1432 170 11 19 chr6_random 585111 585376 -153942 + MER2 DNA MER2_type 83 345 0 217 322 172 0 chr6_random 585433 585520 -153798 + L3 LINE CR1 1027 1128 -449 215 306 122 10 chr6_random 585568 585666 -153652 + L3 LINE CR1 1250 1358 -219 25 0 0 0 chr6_random 586154 586179 -153139 + AT_rich Low_complexity Low_complexity 1 25 0 913 9 0 9 chr6_random 586575 586684 -152634 - L1PA2 LINE L1 -2 6153 6046 4325 173 55 7 chr6_random 587018 587352 -151966 + MER6 DNA MER2_type 1 318 -547 273 57 0 0 chr6_random 587352 587387 -151931 + (TGAA)n Simple_repeat Simple_repeat 3 37 0 4325 173 55 7 chr6_random 587387 587878 -151440 + MER6 DNA MER2_type 318 865 0 459 174 0 0 chr6_random 588138 588224 -151094 + CT-rich Low_complexity Low_complexity 3 88 0 262 242 87 41 chr6_random 588465 588539 -150779 - L1M4 LINE L1 -1305 4841 4772 186 43 0 0 chr6_random 588539 588562 -150756 + (TTA)n Simple_repeat Simple_repeat 3 25 0 262 242 87 41 chr6_random 588562 588612 -150706 - L1M4 LINE L1 -1374 4772 4726 2409 100 7 0 chr6_random 588612 588922 -150396 - AluSx SINE Alu 0 312 1 262 242 87 41 chr6_random 588922 589015 -150303 - L1M4 LINE L1 -1420 4726 4613 597 207 61 96 chr6_random 589772 589879 -149439 + MIR SINE MIR 72 170 -92 192 40 0 0 chr6_random 589879 589904 -149414 + (TG)n Simple_repeat Simple_repeat 2 26 0 597 207 61 96 chr6_random 589904 589994 -149324 + MIR SINE MIR 170 262 0 362 321 82 86 chr6_random 591904 592368 -146950 - L2 LINE L2 0 3272 2811 1104 69 0 0 chr6_random 592407 592538 -146780 - AluSp SINE Alu -182 131 1 20605 165 31 14 chr6_random 592543 596035 -143283 - L1 LINE L1 -817 6748 3117 2117 92 48 0 chr6_random 596035 596328 -142990 - AluSp SINE Alu -6 307 1 20605 165 31 14 chr6_random 596328 599493 -139825 - L1 LINE L1 -4448 3117 6 201 147 0 0 chr6_random 600433 600467 -138851 + (A)n Simple_repeat Simple_repeat 1 34 0 685 149 8 8 chr6_random 600611 600745 -138573 + GA-rich Low_complexity Low_complexity 3 136 0 814 291 18 9 chr6_random 601513 601736 -137582 - MIR SINE MIR -26 236 12 22 0 0 0 chr6_random 602734 602756 -136562 + AT_rich Low_complexity Low_complexity 1 22 0 587 293 77 50 chr6_random 602970 603332 -135986 + L1MEd LINE L1 73 444 -5675 2192 102 14 0 chr6_random 603642 603937 -135381 + AluSc SINE Alu 1 299 -10 332 189 151 57 chr6_random 604667 604773 -134545 + MER63 DNA MER1_type 2 743 -319 247 271 12 47 chr6_random 604782 604867 -134451 + MER63 DNA MER1_type 978 1059 -2 22 35 0 0 chr6_random 605125 605154 -134164 + AT_rich Low_complexity Low_complexity 1 29 0 221 308 90 0 chr6_random 605154 605232 -134086 - L2 LINE L2 0 3313 3229 459 301 64 2 chr6_random 605534 605721 -133597 + L1ME3A LINE L1 5704 5904 -258 1423 161 33 33 chr6_random 606026 606299 -133019 - AluJo SINE Alu -25 287 15 1555 179 0 59 chr6_random 607776 608100 -131218 + AluJo SINE Alu 1 305 -7 4407 42 0 61 chr6_random 608190 608815 -130503 - L1PA4 LINE L1 -3159 2987 2401 19303 38 1 1 chr6_random 608815 611992 -127326 + L1PA4 LINE L1 2986 6165 0 415 86 0 0 chr6_random 612830 612888 -126430 - LTR47A LTR ERVL -53 399 342 3797 147 88 19 chr6_random 612892 613564 -125754 + MER72 LTR ERV1 5 722 0 689 192 34 85 chr6_random 613591 613768 -125550 - LTR47A LTR ERVL -112 340 173 292 150 67 0 chr6_random 613758 613818 -125500 - LTR47A LTR ERVL -388 64 1 * 21 0 0 0 chr6_random 614252 614273 -125045 + AT_rich Low_complexity Low_complexity 1 21 0 474 184 11 95 chr6_random 614527 614545 -124773 - L1MA10 LINE L1 0 6334 6317 2757 188 67 83 chr6_random 614545 615422 -123896 - L1ME2 LINE L1 -9 6155 5293 931 314 72 20 chr6_random 615533 615988 -123330 + L2 LINE L2 2835 3313 0 230 280 27 13 chr6_random 616414 616489 -122829 - Charlie8 DNA MER1_type -2197 220 145 201 333 139 11 chr6_random 616511 616691 -122627 + MIR SINE MIR 58 260 -2 291 143 0 39 chr6_random 616888 616965 -122353 + (GGAA)n Simple_repeat Simple_repeat 2 75 0 1210 33 6 28 chr6_random 616965 617145 -122173 + (GAAA)n Simple_repeat Simple_repeat 2 177 0 688 301 24 70 chr6_random 617276 617605 -121713 - MLT1I LTR MaLR -14 395 82 260 415 62 0 chr6_random 618589 618765 -120553 + L2 LINE L2 1065 1251 -2063 703 325 71 80 chr6_random 619333 620262 -119056 + L2 LINE L2 1936 2856 -458 34 0 0 0 chr6_random 620266 620300 -119018 + AT_rich Low_complexity Low_complexity 1 34 0 230 218 36 0 chr6_random 620525 620580 -118738 + L2 LINE L2 3216 3272 0 31 58 0 0 chr6_random 621588 621640 -117678 + AT_rich Low_complexity Low_complexity 1 52 0 234 213 18 61 chr6_random 621675 621839 -117479 + (TTAA)n Simple_repeat Simple_repeat 2 158 0 237 246 58 0 chr6_random 621843 621912 -117406 - L1ME4a LINE L1 -102 6019 5947 249 256 273 42 chr6_random 622045 622353 -116965 - L1ME4a LINE L1 -336 5785 5407 1783 156 83 56 chr6_random 622626 623163 -116155 - MLT2A2 LTR ERVL 0 554 1 2047 103 41 0 chr6_random 624970 625261 -114057 + AluSc SINE Alu 2 304 -5 1567 184 0 0 chr6_random 625505 625760 -113558 - AluJo SINE Alu -26 286 32 184 319 62 26 chr6_random 627096 627209 -112109 + L2 LINE L2 3153 3269 -3 298 231 205 58 chr6_random 627656 627812 -111506 - MER5A DNA MER1_type -7 182 4 207 307 58 44 chr6_random 630953 631090 -108228 - L2 LINE L2 -49 3264 3126 1819 168 3 0 chr6_random 631091 631388 -107930 + AluJb SINE Alu 1 298 -14 420 207 16 90 chr6_random 631715 631903 -107415 + AluSg/x SINE Alu 117 290 -19 278 267 90 14 chr6_random 632218 632364 -106954 - L1ME LINE L1 -603 5518 5365 395 87 14 0 chr6_random 633710 633779 -105539 + (GA)n Simple_repeat Simple_repeat 1 70 0 338 246 47 143 chr6_random 634116 634417 -104901 - HAL1 LINE L1 -403 2104 1833 1586 248 78 64 chr6_random 634419 634882 -104436 - HAL1 LINE L1 -725 1782 1327 1889 144 6 28 chr6_random 634882 635201 -104117 - AluJo SINE Alu 0 312 1 1586 248 78 64 chr6_random 635201 635692 -103626 - HAL1 LINE L1 -1180 1327 814 309 26 0 0 chr6_random 635959 635997 -103321 + (TG)n Simple_repeat Simple_repeat 2 39 0 234 91 0 0 chr6_random 636032 636076 -103242 + LTR66 LTR ERVL 396 439 -171 249 185 0 0 chr6_random 636096 636150 -103168 - L1MC4 LINE L1 -1339 6703 6650 21 57 0 0 chr6_random 636605 636640 -102678 + AT_rich Low_complexity Low_complexity 1 35 0 234 268 116 65 chr6_random 637342 637480 -101838 + MLT1L LTR MaLR 19 163 -452 297 210 29 172 chr6_random 637617 637931 -101387 + MLT1L LTR MaLR 347 615 0 461 293 50 36 chr6_random 639138 639349 -99969 + MIR SINE MIR 38 255 -7 1756 187 0 0 chr6_random 639349 639655 -99663 - AluJb SINE Alu 0 306 1 2028 184 41 41 chr6_random 639709 640170 -99148 + MLT1D LTR MaLR 1 461 -44 246 128 0 0 chr6_random 640175 640214 -99104 + (T)n Simple_repeat Simple_repeat 1 39 0 1070 57 7 0 chr6_random 640520 640661 -98657 - L1PA8 LINE L1 0 6172 6031 323 337 17 58 chr6_random 641004 641176 -98142 - HAL1 LINE L1 -2298 209 45 1528 179 189 5 chr6_random 642400 642819 -96499 - LTR54B LTR ERV1 -2 496 1 273 261 0 98 chr6_random 643032 643124 -96194 - L2 LINE L2 -4 3309 3227 949 298 131 84 chr6_random 643145 644244 -95074 - L2 LINE L2 -515 2799 1649 496 163 30 22 chr6_random 644345 644480 -94838 + GA-rich Low_complexity Low_complexity 1 136 0 26 30 0 0 chr6_random 644552 644585 -94733 + AT_rich Low_complexity Low_complexity 1 33 0 22 0 0 0 chr6_random 644879 644901 -94417 + AT_rich Low_complexity Low_complexity 1 22 0 42212 54 2 5 chr6_random 645151 651260 -88058 + L1PA4 LINE L1 3 6096 -59 2199 96 0 4 chr6_random 651744 652025 -87293 - AluSq SINE Alu -33 280 1 281 258 16 3 chr6_random 652062 652181 -87137 + MER5A DNA MER1_type 9 168 -10 1304 120 0 5 chr6_random 652649 652833 -86485 + AluSp SINE Alu 118 300 -13 572 158 0 0 chr6_random 653310 653411 -85907 + AluJb SINE Alu 209 309 -3 2131 115 3 0 chr6_random 653661 653948 -85370 + AluSp SINE Alu 1 288 -25 21 36 0 0 chr6_random 653972 654000 -85318 + AT_rich Low_complexity Low_complexity 1 28 0 2063 120 3 13 chr6_random 654669 654978 -84340 - AluSg SINE Alu -4 306 1 356 311 23 15 chr6_random 655461 655593 -83725 + HERVL LTR ERVL 3577 3709 -1945 466 147 0 77 chr6_random 655717 655860 -83458 + AluSq/x SINE Alu 1 132 -180 509 71 0 0 chr6_random 655969 656039 -83279 + L1PA3 LINE L1 6081 6150 -5 266 287 155 16 chr6_random 656331 656460 -82858 + MIR3 SINE MIR 55 201 -7 457 287 134 12 chr6_random 657183 657347 -81971 + LTR16C LTR ERVL 70 253 -238 366 208 0 79 chr6_random 657440 657541 -81777 + LTR16C LTR ERVL 385 477 -14 621 158 59 0 chr6_random 657563 657664 -81654 - FLAM_A SINE Alu -16 126 20 1147 314 88 41 chr6_random 657672 658715 -80603 - L1M4 LINE L1 -2683 3463 2372 842 211 0 0 chr6_random 660106 660253 -79065 - AluJb SINE Alu -31 281 135 252 0 0 0 chr6_random 660919 660947 -78371 + (A)n Simple_repeat Simple_repeat 1 28 0 183 360 45 11 chr6_random 661190 661279 -78039 + L2 LINE L2 2666 2757 -557 1339 204 4 0 chr6_random 661280 661520 -77798 - AluJb SINE Alu -70 242 2 567 342 54 61 chr6_random 661575 661999 -77319 + L2 LINE L2 2852 3272 0 942 305 64 27 chr6_random 662259 662698 -76620 - LTR16C LTR ERVL 0 491 37 28 0 0 0 chr6_random 662858 662886 -76432 + AT_rich Low_complexity Low_complexity 1 28 0 222 37 0 0 chr6_random 663146 663173 -76145 + (CAAAA)n Simple_repeat Simple_repeat 3 29 0 27 49 0 0 chr6_random 663404 663445 -75873 + AT_rich Low_complexity Low_complexity 1 41 0 514 344 117 44 chr6_random 663738 664264 -75054 + L2 LINE L2 1381 1867 -1447 2125 111 27 3 chr6_random 664264 664561 -74757 - AluSg SINE Alu -6 304 1 514 344 117 44 chr6_random 664561 665161 -74157 + L2 LINE L2 1867 2589 -725 437 151 14 0 chr6_random 665169 665242 -74076 - MADE1 DNA Mariner -6 74 1 325 344 97 49 chr6_random 665332 665881 -73437 + L2 LINE L2 2694 3272 0 22 70 0 0 chr6_random 667421 667464 -71854 + AT_rich Low_complexity Low_complexity 1 43 0 250 292 52 26 chr6_random 668017 668035 -71283 - L1MA10 LINE L1 -2 6332 6315 2244 216 61 36 chr6_random 668035 668670 -70648 - L1ME2 LINE L1 -9 6155 5505 248 258 124 0 chr6_random 669258 669355 -69963 - L1ME LINE L1 -437 5684 5576 683 229 17 6 chr6_random 669622 669801 -69517 + L1MB7 LINE L1 6004 6184 0 277 290 38 70 chr6_random 669964 670150 -69168 - MIR SINE MIR -4 258 79 1421 220 7 7 chr6_random 670503 670812 -68506 + AluJo SINE Alu 1 309 0 242 233 107 19 chr6_random 671844 671947 -67371 - L2 LINE L2 -2 3311 3200 283 203 16 53 chr6_random 672094 672281 -67037 + (TTATA)n Simple_repeat Simple_repeat 1 180 0 1714 154 99 15 chr6_random 672374 672706 -66612 - MER46B DNA MER2_type 0 236 2 1644 229 11 27 chr6_random 672979 673351 -65967 - MLT1A2 LTR MaLR -5 369 4 21 0 0 0 chr6_random 673366 673387 -65931 + AT_rich Low_complexity Low_complexity 1 21 0 1244 220 151 20 chr6_random 673395 673745 -65573 + MSTD LTR MaLR 1 396 0 23 54 0 0 chr6_random 674173 674210 -65108 + AT_rich Low_complexity Low_complexity 1 37 0 554 237 178 7 chr6_random 674329 674481 -64837 - MER5A DNA MER1_type -6 183 6 204 206 16 63 chr6_random 674545 674608 -64710 + MIR SINE MIR 148 207 -55 226 337 71 0 chr6_random 674866 674964 -64354 - L2 LINE L2 -657 2657 2553 263 299 94 26 chr6_random 675032 675149 -64169 + MER5B DNA MER1_type 17 141 -37 192 241 24 60 chr6_random 675505 675588 -63730 - MIR3 SINE MIR -127 81 2 15135 156 25 15 chr6_random 675954 681115 -58203 + L1MA2 LINE L1 2507 7723 0 396 245 123 9 chr6_random 681389 681495 -57823 + MER5B DNA MER1_type 20 137 -41 2769 10 0 0 chr6_random 682020 682323 -56995 + AluYa8 SINE Alu 1 303 -7 212 203 14 81 chr6_random 682494 682568 -56750 + MIR SINE MIR 112 180 -82 306 0 0 0 chr6_random 683905 683939 -55379 + (TG)n Simple_repeat Simple_repeat 1 34 0 1883 161 0 0 chr6_random 683939 684218 -55100 - AluSx SINE Alu -33 279 1 631 221 52 0 chr6_random 685597 685751 -53567 + LTR65 LTR ERV1 5 166 -503 265 270 50 20 chr6_random 685965 686065 -53253 + MER90 LTR ERV1 512 614 0 306 0 0 0 chr6_random 686321 686355 -52963 + (CA)n Simple_repeat Simple_repeat 1 34 0 6290 135 91 12 chr6_random 686366 686810 -52508 - HSMAR2 DNA Mariner -1 1301 893 2810 198 11 9 chr6_random 686810 687350 -51968 + MER87 LTR ERV1 1 541 0 6290 135 91 12 chr6_random 687350 687985 -51333 - HSMAR2 DNA Mariner -409 893 137 314 306 63 10 chr6_random 688137 688343 -50975 - L1M4 LINE L1 -2098 4048 3832 * 6451 80 9 2 chr6_random 688332 689220 -50098 - L1PB1 LINE L1 -1 6150 5257 889 99 23 0 chr6_random 689226 689357 -49961 - HSMAR2 DNA Mariner -1129 173 40 489 161 0 0 chr6_random 689542 689629 -49689 + L1MA8 LINE L1 6177 6263 -28 231 167 0 0 chr6_random 689630 689666 -49652 + Alu SINE Alu 3 38 -261 740 212 22 0 chr6_random 689674 689811 -49507 + AluJb SINE Alu 141 280 -32 441 0 0 0 chr6_random 689811 689860 -49458 + (TCTA)n Simple_repeat Simple_repeat 4 52 0 26 0 0 0 chr6_random 689875 689901 -49417 + AT_rich Low_complexity Low_complexity 1 26 0 6311 93 7 2 chr6_random 690293 691608 -47710 + L1PA10 LINE L1 4826 6150 -18 40 49 0 0 chr6_random 691651 691712 -47606 + AT_rich Low_complexity Low_complexity 1 61 0 31 68 0 0 chr6_random 691803 691862 -47456 + AT_rich Low_complexity Low_complexity 1 59 0 28 29 0 0 chr6_random 691936 691971 -47347 + AT_rich Low_complexity Low_complexity 1 35 0 1031 151 63 39 chr6_random 692087 692292 -47026 - MER2 DNA MER2_type -135 210 1 1435 234 135 16 chr6_random 692408 692852 -46466 + MLT1D LTR MaLR 1 497 -8 911 206 70 73 chr6_random 693716 694002 -45316 - AluJb SINE Alu -2 310 26 486 218 158 55 chr6_random 695488 695716 -43602 + L1MC5 LINE L1 7331 7534 -427 189 0 0 0 chr6_random 695716 695737 -43581 + (CA)n Simple_repeat Simple_repeat 2 22 0 486 218 158 55 chr6_random 695737 695893 -43425 + L1MC5 LINE L1 7534 7755 -206 1553 167 49 29 chr6_random 696670 696976 -42342 + AluJo SINE Alu 1 312 0 2869 160 40 94 chr6_random 697069 697800 -41518 - LTR8 LTR ERV1 0 691 1 181 286 0 0 chr6_random 698378 698420 -40898 - MIR3 SINE MIR -52 156 115 195 291 18 0 chr6_random 699246 699301 -40017 + L2 LINE L2 3193 3248 -24 282 366 50 10 chr6_random 699517 699650 -39668 - MIR SINE MIR -69 139 4 333 203 0 29 chr6_random 700115 700184 -39134 + AluJ/FLAM SINE Alu 34 100 -202 187 313 24 48 chr6_random 702428 702511 -36807 - L2 LINE L2 -13 3300 3220 180 264 56 28 chr6_random 702650 702722 -36596 - L2 LINE L2 -214 3058 2985 276 257 14 0 chr6_random 703408 703482 -35836 - LTR37A LTR ERV1 -241 185 111 1208 279 39 64 chr6_random 703736 704452 -34866 - MER31-int LTR ERV1 -835 4101 3404 254 332 78 66 chr6_random 705344 705400 -33918 - MLT1K LTR MaLR -6 582 528 1342 114 59 27 chr6_random 705400 705619 -33699 + MER30 DNA MER1_type 5 230 0 254 332 78 66 chr6_random 705619 705806 -33512 - MLT1K LTR MaLR -60 528 336 258 32 0 0 chr6_random 706480 706511 -32807 + (TA)n Simple_repeat Simple_repeat 2 32 0 2276 73 0 51 chr6_random 706511 706826 -32492 - AluSg1 SINE Alu -10 299 1 730 307 79 59 chr6_random 706849 707253 -32065 - L2 LINE L2 -3 3269 2858 1483 197 53 11 chr6_random 707325 707609 -31709 + AluJb SINE Alu 6 301 -11 27 0 0 0 chr6_random 707999 708026 -31292 + AT_rich Low_complexity Low_complexity 1 27 0 2089 128 6 3 chr6_random 708575 708887 -30431 - AluSq SINE Alu 0 313 1 269 330 108 52 chr6_random 709133 709945 -29373 - L2 LINE L2 -1707 1607 750 351 207 216 9 chr6_random 710424 710523 -28795 + AluJb SINE Alu 3 129 -173 225 0 0 0 chr6_random 710523 710548 -28770 + (TAAA)n Simple_repeat Simple_repeat 4 28 0 351 207 216 9 chr6_random 710548 710559 -28759 + AluJb SINE Alu 129 136 -166 22 70 0 0 chr6_random 712416 712459 -26859 + AT_rich Low_complexity Low_complexity 1 43 0 23 33 0 0 chr6_random 714138 714168 -25150 + AT_rich Low_complexity Low_complexity 1 30 0 254 320 34 53 chr6_random 714791 714997 -24321 - MER31-int LTR ERV1 -892 4044 3843 27 0 0 0 chr6_random 715070 715097 -24221 + AT_rich Low_complexity Low_complexity 1 27 0 1991 140 7 0 chr6_random 715103 715396 -23922 + AluSq SINE Alu 1 295 -18 1944 146 7 0 chr6_random 716151 716446 -22872 + AluSx SINE Alu 1 297 -15 42561 52 2 3 chr6_random 716714 722871 -16447 - L1PA4 LINE L1 -1 6154 8 2270 111 0 0 chr6_random 724842 725140 -14178 + AluSq SINE Alu 1 298 -15 22 56 0 0 chr6_random 725790 725826 -13492 + AT_rich Low_complexity Low_complexity 1 36 0 486 250 131 12 chr6_random 726893 727061 -12257 - MER5A DNA MER1_type 0 189 2 7053 92 10 199 chr6_random 728041 729739 -9579 + SVA Other Other 10 1386 0 1283 45 0 13 chr6_random 731006 731163 -8155 - AluY SINE Alu -47 264 110 904 266 145 58 chr6_random 731163 732224 -7094 - L1MEc LINE L1 -4075 2321 1169 573 246 101 42 chr6_random 732233 732521 -6797 - L1MEc LINE L1 -5285 920 616 336 298 56 43 chr6_random 732542 732703 -6615 - L2 LINE L2 -22 3291 3129 26 0 0 0 chr6_random 732744 732770 -6548 + AT_rich Low_complexity Low_complexity 1 26 0 21 36 0 0 chr6_random 735315 735343 -3975 + AT_rich Low_complexity Low_complexity 1 28 0 347 261 116 43 chr6_random 736730 736868 -2450 + MIR SINE MIR 6 153 -109 21 57 0 0 chr6_random 736940 736975 -2343 + AT_rich Low_complexity Low_complexity 1 35 0 229 115 0 0 chr6_random 737303 737355 -1963 - LTR66 LTR ERVL -165 445 394 207 0 0 0 chr6_random 737355 737378 -1940 + (CA)n Simple_repeat Simple_repeat 2 24 0 7501 28 10 0 chr6_random 737388 738903 -415 - L1PA5 LINE L1 -9 6145 4624 673 131 9 9 chr6_random 738904 739011 -307 + FLAM_C SINE Alu 27 133 -10 700 158 36 7 chr6_random 739013 739152 -166 + L1MC3 LINE L1 7617 7759 -26