1199 176 60 0 chr5 0 233 -199629917 + HERVH LTR ERV1 4903 5149 -2564 1313 111 18 5 chr5 234 451 -199629699 + HERVH LTR ERV1 5600 5819 -1894 * 2307 79 45 13 chr5 449 829 -199629321 + HERVH LTR ERV1 7322 7713 0 1625 148 120 68 chr5 829 1255 -199628895 + LTR7 LTR ERV1 1 448 -2 7434 180 20 10 chr5 1255 2679 -199627471 + MSTB-int LTR MaLR 214 1651 0 2601 157 7 25 chr5 2679 3113 -199627037 + MSTB LTR MaLR 1 426 0 213 222 0 0 chr5 4498 4561 -199625589 + (TG)n Simple_repeat Simple_repeat 2 64 0 4557 174 49 118 chr5 5185 5899 -199624251 + L1PB4 LINE L1 3517 4278 -1878 1822 144 32 32 chr5 5899 6245 -199623905 - THE1B LTR MaLR -18 346 1 4557 174 49 118 chr5 6245 8048 -199622102 + L1PB4 LINE L1 4278 6149 -7 324 333 42 30 chr5 8050 8218 -199621932 - L1MEc LINE L1 -4913 1483 1314 480 239 65 0 chr5 8219 8374 -199621776 + L1MEc LINE L1 735 899 -5497 982 251 29 57 chr5 8434 8945 -199621205 + L1MEc LINE L1 1003 1499 -4897 750 330 76 72 chr5 8959 9619 -199620531 - L1MEc LINE L1 -3385 2830 1334 295 222 0 0 chr5 9619 9682 -199620468 + MSTA LTR MaLR 366 428 0 5448 174 15 1 chr5 9682 10684 -199619466 + MSTA-int LTR MaLR 1 1016 -635 201 358 138 0 chr5 13608 13731 -199616419 - L2 LINE L2 -76 3237 3098 318 323 72 44 chr5 13981 14232 -199615918 + HAL1 LINE L1 1530 1787 -720 415 284 145 39 chr5 20274 20427 -199609723 + MLT1C LTR MaLR 47 182 -285 974 265 132 9 chr5 20427 20752 -199609398 + MLT1A1 LTR MaLR 1 365 0 415 284 145 39 chr5 20752 20936 -199609214 + MLT1C LTR MaLR 182 420 -47 706 310 102 16 chr5 21294 21949 -199608201 + L1ME LINE L1 5032 5737 -427 380 217 46 53 chr5 23827 23979 -199606171 + MER20 DNA MER1_type 6 156 -63 7403 119 101 103 chr5 25989 27689 -199602461 - pTR5 LTR ERV1 0 2438 742 529 335 108 40 chr5 27898 28379 -199601771 - L1MC5 LINE L1 -54 7907 7394 1041 254 38 42 chr5 28387 28493 -199601657 - L1M4 LINE L1 -2627 3519 3414 2095 131 0 10 chr5 28493 28805 -199601345 - AluSg SINE Alu -1 309 1 1041 254 38 42 chr5 28805 29221 -199600929 - L1M4 LINE L1 -2732 3414 2999 764 269 36 49 chr5 31317 31693 -199598457 - MLT1B LTR MaLR -12 378 1 207 284 45 23 chr5 35476 35652 -199594498 + (GGCTG)n Simple_repeat Simple_repeat 1 180 0 221 298 32 13 chr5 39932 40041 -199590109 + MIR SINE MIR 80 151 -57 279 264 0 66 chr5 40302 40423 -199589727 + C-rich Low_complexity Low_complexity 4 116 0 363 246 29 51 chr5 40442 40617 -199589533 + C-rich Low_complexity Low_complexity 5 175 0 285 274 102 15 chr5 41300 41497 -199588653 + MLT1D LTR MaLR 33 246 -259 411 297 76 68 chr5 43643 43906 -199586244 + L1ME LINE L1 674 938 -5181 186 385 33 16 chr5 44510 44632 -199585518 + L2 LINE L2 3148 3271 -1 235 214 0 0 chr5 46831 46887 -199583263 + (TG)n Simple_repeat Simple_repeat 1 56 0 1889 166 13 0 chr5 46999 47300 -199582850 - AluSx SINE Alu -7 305 1 2339 292 76 60 chr5 47350 49109 -199581041 + L1ME LINE L1 3397 5183 -946 826 203 102 0 chr5 49111 49308 -199580842 - Tigger1 DNA MER2_type 0 2418 2202 764 183 14 0 chr5 49306 49448 -199580702 - Tigger1 DNA MER2_type -2269 149 6 * 320 314 66 8 chr5 49459 49580 -199580570 + L1ME LINE L1 5186 5313 -816 204 146 24 0 chr5 49546 49587 -199580563 + (CAAA)n Simple_repeat Simple_repeat 2 43 0 * 518 186 144 8 chr5 49611 49729 -199580421 + AluJo SINE Alu 1 134 -178 1173 229 27 53 chr5 49742 50117 -199580033 + L1ME LINE L1 5296 5660 -489 2138 100 7 32 chr5 51279 51588 -199578562 - AluY SINE Alu -5 306 6 12050 209 31 12 chr5 51611 52469 -199577681 - L1PB1 LINE L1 0 6867 6027 243 0 0 0 chr5 52469 52496 -199577654 + (TTTG)n Simple_repeat Simple_repeat 1 27 0 1819 163 3 3 chr5 52496 52772 -199577378 - AluSx SINE Alu -32 280 5 12050 209 31 12 chr5 52772 57568 -199572582 - L1PB1 LINE L1 -839 6028 1109 801 220 11 0 chr5 57571 57748 -199572402 - L1PB1 LINE L1 -6679 184 6 279 273 31 8 chr5 58579 58707 -199571443 + (TG)n Simple_repeat Simple_repeat 2 132 0 1261 211 0 84 chr5 58822 59145 -199571005 - AluJo SINE Alu -16 296 1 1285 260 57 44 chr5 59850 60512 -199569638 + L1ME LINE L1 4798 5479 -687 621 175 0 44 chr5 60512 60649 -199569501 + FLAM_C SINE Alu 3 133 0 1285 260 57 44 chr5 60649 60853 -199569297 + L1ME LINE L1 5479 5679 -487 1965 189 8 3 chr5 60865 61245 -199568905 - MLT1B LTR MaLR -8 382 1 234 250 0 0 chr5 62310 62374 -199567776 + (CA)n Simple_repeat Simple_repeat 1 64 0 1655 198 31 0 chr5 62863 63151 -199566999 - AluJb SINE Alu -15 297 1 415 332 87 39 chr5 63244 63855 -199566295 - L1MC4a LINE L1 -646 5520 5258 552 329 124 45 chr5 63859 64415 -199565735 - L1MC4a LINE L1 -897 5249 4650 207 273 23 30 chr5 67083 67215 -199562935 + (CA)n Simple_repeat Simple_repeat 1 131 0 195 400 9 0 chr5 68924 69034 -199561116 + L2 LINE L2 3145 3255 -17 188 402 51 8 chr5 69145 69262 -199560888 + L3b LINE CR1 1455 1576 -7 2272 85 0 69 chr5 69494 69812 -199560338 - AluSx SINE Alu -16 296 1 950 82 48 0 chr5 71802 71948 -199558202 - MER41A LTR ERV1 0 554 402 281 263 46 72 chr5 72416 72568 -199557582 - L1M4 LINE L1 -1201 4945 4798 1607 199 3 10 chr5 73289 73590 -199556560 + AluJo SINE Alu 1 299 -13 204 240 27 13 chr5 73712 73787 -199556363 + (CA)n Simple_repeat Simple_repeat 1 76 0 575 208 38 50 chr5 74880 75039 -199555111 + L1ME LINE L1 5523 5679 -487 2009 184 8 3 chr5 75051 75431 -199554719 - MLT1B LTR MaLR -8 382 1 708 209 41 0 chr5 75806 75978 -199554172 - L1PBa LINE L1 -6679 184 6 332 327 92 52 chr5 76398 76780 -199553370 - L1M4 LINE L1 -1128 5018 4622 32 0 0 0 chr5 79098 79130 -199551020 + GC_rich Low_complexity Low_complexity 1 32 0 621 175 0 44 chr5 81432 81569 -199548581 - FLAM_C SINE Alu 0 133 3 896 289 65 20 chr5 81570 82233 -199547917 - L1ME LINE L1 -675 5491 4796 1464 228 3 10 chr5 82938 83236 -199546914 + AluJo SINE Alu 1 296 -16 300 257 29 0 chr5 83351 83456 -199546694 + (CA)n Simple_repeat Simple_repeat 2 109 0 25 0 0 0 chr5 83522 83547 -199546603 + AT_rich Low_complexity Low_complexity 1 25 0 5375 165 20 35 chr5 84014 84965 -199545185 + L1PB1 LINE L1 4362 5285 -866 1836 160 3 3 chr5 84965 85273 -199544877 + AluSx SINE Alu 5 312 0 5375 165 20 35 chr5 85273 86128 -199544022 + L1PB1 LINE L1 5285 6151 0 2216 100 3 29 chr5 86151 86460 -199543690 + AluY SINE Alu 6 306 -5 319 303 197 16 chr5 86658 86912 -199543238 + L1ME LINE L1 5335 5634 -536 1181 204 23 80 chr5 87624 88011 -199542139 - L1ME LINE L1 -489 5677 5313 488 197 145 8 chr5 88024 88141 -199542009 - AluJo SINE Alu -178 134 2 783 180 6 25 chr5 88301 88462 -199541688 + Tigger1 DNA MER2_type 6 163 -2255 * 793 181 124 0 chr5 88443 88636 -199541514 + Tigger1 DNA MER2_type 2202 2418 0 2332 287 78 66 chr5 88638 90403 -199539747 - L1ME LINE L1 -946 5200 3414 1501 183 10 36 chr5 90455 90756 -199539394 + AluSx SINE Alu 1 293 -19 26 0 0 0 chr5 91318 91344 -199538806 + GC_rich Low_complexity Low_complexity 1 26 0 197 290 29 0 chr5 92056 92125 -199538025 - MIR SINE MIR -57 151 81 208 277 45 28 chr5 96465 96642 -199533508 + (CAGCC)n Simple_repeat Simple_repeat 1 180 0 723 265 49 48 chr5 100425 100801 -199529349 + MLT1B LTR MaLR 1 378 -12 392 238 8 0 chr5 106450 106576 -199523574 + (TGGA)n Simple_repeat Simple_repeat 4 130 0 373 260 6 6 chr5 107523 107700 -199522450 + (TG)n Simple_repeat Simple_repeat 1 177 0 289 264 0 0 chr5 107715 107836 -199522314 + (TG)n Simple_repeat Simple_repeat 1 121 0 327 292 136 30 chr5 110056 110292 -199519858 + L1M4 LINE L1 2 262 -6280 1349 269 114 8 chr5 110365 110893 -199519257 + L1M4 LINE L1 3754 4337 -2307 423 262 47 75 chr5 111423 111637 -199518513 + L1M4 LINE L1 5604 5811 -833 353 241 17 26 chr5 111758 111874 -199518276 - L1M4 LINE L1 -1465 4681 4567 372 350 55 12 chr5 111880 112043 -199518107 + L1M4 LINE L1 1720 1889 -4755 357 223 39 39 chr5 113916 114019 -199516131 + MER91C DNA MER1_type 20 122 -18 279 247 32 21 chr5 115100 115193 -199514957 + (TCCA)n Simple_repeat Simple_repeat 1 94 0 233 250 147 26 chr5 115425 115541 -199514609 - L2 LINE L2 -277 3036 2907 202 301 108 0 chr5 115683 115776 -199514374 - L2 LINE L2 -738 2576 2474 313 190 51 0 chr5 116164 116243 -199513907 - LTR50 LTR ERVL -2 793 711 261 175 16 0 chr5 116367 116430 -199513720 - LTR50 LTR ERVL -277 518 455 338 276 23 49 chr5 116557 116865 -199513285 - L1MCa LINE L1 -4727 1699 1400 * 4013 119 52 7 chr5 116843 117971 -199512179 - L1PBa LINE L1 -4940 1923 595 239 219 14 55 chr5 118403 118476 -199511674 - L1MCa LINE L1 -5954 898 829 2273 116 7 0 chr5 118560 118863 -199511287 + AluSx SINE Alu 1 305 -7 731 291 108 6 chr5 119433 119756 -199510394 - MLT1C LTR MaLR -7 460 105 1069 285 74 19 chr5 119857 120618 -199509532 + L1M4 LINE L1 2253 3053 -3591 1093 198 142 20 chr5 120622 120966 -199509184 - MLT1B LTR MaLR -4 386 1 4005 255 106 37 chr5 120966 122607 -199507543 + L1M4 LINE L1 3049 4803 -1841 4786 175 29 32 chr5 122727 123703 -199506447 + MSTB-int LTR MaLR 679 1651 0 2654 167 5 16 chr5 123703 124134 -199506016 + MSTB LTR MaLR 1 426 0 2209 92 0 3 chr5 125450 125734 -199504416 + AluY SINE Alu 1 283 -28 867 306 102 23 chr5 125767 126685 -199503465 - L1MEd LINE L1 -4873 1246 321 1937 188 37 37 chr5 127565 127997 -199502153 + MSTB1 LTR MaLR 1 432 0 266 188 47 31 chr5 129792 129856 -199500294 + MIR SINE MIR 77 141 -67 1152 69 0 0 chr5 131217 131348 -199498802 + AluY SINE Alu 1 131 -180 297 0 0 0 chr5 131351 131384 -199498766 + (A)n Simple_repeat Simple_repeat 1 33 0 1271 141 0 0 chr5 131384 131569 -199498581 + AluY SINE Alu 119 303 -8 2085 248 49 24 chr5 131873 132611 -199497539 + L1M4 LINE L1 816 1571 -4971 1259 191 4 4 chr5 132611 132846 -199497304 + Tigger7 DNA MER2_type 1 235 -315 630 178 0 0 chr5 132844 132945 -199497205 + Tigger7 DNA MER2_type 2381 2481 -6 * 2202 222 27 24 chr5 132959 133685 -199496465 + L1M4 LINE L1 1570 2390 -4256 1228 223 28 14 chr5 133685 133972 -199496178 + AluJo SINE Alu 1 291 -21 2202 222 27 24 chr5 133972 133993 -199496157 + L1M4 LINE L1 2390 2409 -4237 1995 181 37 37 chr5 134558 134990 -199495160 + MSTB1 LTR MaLR 1 432 0 254 211 60 0 chr5 136784 136857 -199493293 + MIR SINE MIR 76 135 -73 2291 96 0 69 chr5 138206 138540 -199491610 + AluY SINE Alu 1 311 0 2068 243 54 27 chr5 138835 139571 -199490579 + L1ME4a LINE L1 816 1571 -4971 1239 182 22 4 chr5 139571 139802 -199490348 + Tigger7 DNA MER2_type 1 235 -315 636 178 0 0 chr5 139800 139901 -199490249 + Tigger7 DNA MER2_type 2381 2481 -6 * 2246 229 30 43 chr5 139915 140643 -199489507 + L1ME4a LINE L1 1570 2369 -4277 1573 194 32 7 chr5 140643 140927 -199489223 + AluJo SINE Alu 1 291 -21 2246 229 30 43 chr5 140927 141262 -199488888 + L1ME4a LINE L1 2369 2707 -3939 879 305 103 17 chr5 141620 142688 -199487462 + L1ME4a LINE L1 5222 6383 -285 214 289 72 59 chr5 143151 143303 -199486847 - MIR SINE MIR -81 181 28 1147 135 12 0 chr5 144015 144185 -199485965 - AluSg/x SINE Alu -7 303 132 1968 88 11 4 chr5 144185 144448 -199485702 - AluY SINE Alu -14 297 33 303 28 0 0 chr5 144468 144504 -199485646 + (CA)n Simple_repeat Simple_repeat 2 37 0 497 256 56 32 chr5 144818 145068 -199485082 + MLT1A1 LTR MaLR 19 274 -91 * 735 197 48 16 chr5 145065 145253 -199484897 + MLT1A2 LTR MaLR 181 374 0 327 295 103 58 chr5 146385 146609 -199483541 + L1ME4a LINE L1 6364 6597 -22 859 312 114 65 chr5 147171 147829 -199482321 + L1MC1 LINE L1 4560 5249 -897 366 339 60 35 chr5 147833 148487 -199481663 + L1MC1 LINE L1 5258 5976 -357 1660 193 30 0 chr5 148537 148833 -199481317 + AluJb SINE Alu 1 305 -7 248 234 0 0 chr5 149320 149384 -199480766 + (TG)n Simple_repeat Simple_repeat 1 64 0 2113 179 16 5 chr5 150447 150833 -199479317 + MLT1B LTR MaLR 1 390 0 790 236 19 28 chr5 150837 151053 -199479097 - L1ME LINE L1 -487 5662 5449 266 248 0 16 chr5 151054 151149 -199479001 - L1ME LINE L1 -483 5664 5574 760 333 62 19 chr5 151307 151841 -199478309 - L1ME LINE L1 -2176 3953 3397 1895 165 14 0 chr5 151891 152188 -199477962 + AluSx SINE Alu 1 301 -11 235 214 0 0 chr5 152300 152356 -199477794 + (CA)n Simple_repeat Simple_repeat 1 56 0 186 385 33 16 chr5 154465 154587 -199475563 - L2 LINE L2 -1 3271 3148 414 271 80 69 chr5 155191 155453 -199474697 - L1ME LINE L1 -5181 938 674 252 274 107 20 chr5 157974 158171 -199471979 - MLT1D LTR MaLR -259 246 33 394 139 0 64 chr5 159382 159555 -199470595 + (TG)n Simple_repeat Simple_repeat 1 162 0 389 230 0 58 chr5 159572 159763 -199470387 + (TG)n Simple_repeat Simple_repeat 1 180 0 298 184 8 32 chr5 159776 159901 -199470249 + (TG)n Simple_repeat Simple_repeat 1 122 0 378 306 39 63 chr5 160141 160501 -199469649 - L1M4c LINE L1 -4982 1402 1052 2106 114 10 0 chr5 160501 160798 -199469352 + AluSx SINE Alu 1 300 -12 378 306 39 63 chr5 160798 160852 -199469298 - L1M4c LINE L1 -5332 1052 998 721 301 78 19 chr5 161118 161590 -199468560 - L1ME LINE L1 -746 5383 4884 1113 272 111 37 chr5 161691 162582 -199467568 - L1ME LINE L1 -1460 4669 3713 475 313 37 0 chr5 162612 162746 -199467404 + MIR SINE MIR 112 250 -12 339 340 14 0 chr5 162848 162989 -199467161 - L1ME LINE L1 -2506 3623 3481 281 294 9 0 chr5 163368 163477 -199466673 - L1ME LINE L1 -2676 3453 3344 331 320 119 48 chr5 163860 164076 -199466074 - L1ME LINE L1 -5076 1043 793 2659 42 0 0 chr5 164076 164387 -199465763 - AluY SINE Alu 0 311 1 331 320 119 48 chr5 164387 164507 -199465643 - L1ME LINE L1 -5326 793 683 279 283 81 0 chr5 164817 164965 -199465185 - L1MDa LINE L1 -4548 1992 1841 225 0 0 0 chr5 165624 165649 -199464501 + (TA)n Simple_repeat Simple_repeat 2 26 0 214 260 26 13 chr5 171305 171382 -199458768 + C-rich Low_complexity Low_complexity 4 81 0 1631 266 90 26 chr5 172526 173244 -199456906 + L1ME LINE L1 4661 5425 -756 382 335 137 13 chr5 173562 173875 -199456275 + L1ME LINE L1 5404 5755 -411 215 269 20 60 chr5 180367 180516 -199449634 + (CAGTG)n Simple_repeat Simple_repeat 1 143 0 * 235 259 29 69 chr5 180463 180637 -199449513 + (CGGTG)n Simple_repeat Simple_repeat 3 169 0 305 278 0 22 chr5 181867 182138 -199448012 + (CA)n Simple_repeat Simple_repeat 1 265 0 322 339 76 38 chr5 185352 185641 -199444509 + HAL1 LINE L1 1530 1829 -678 305 273 204 24 chr5 191930 192099 -199438051 + MLT1C LTR MaLR 25 162 -305 1005 259 132 9 chr5 192099 192424 -199437726 + MLT1A1 LTR MaLR 1 365 0 305 273 204 24 chr5 192424 192608 -199437542 + MLT1C LTR MaLR 162 420 -47 694 311 102 16 chr5 192966 193621 -199436529 + L1ME LINE L1 5032 5737 -427 25 31 0 0 chr5 198967 198999 -199431151 + GC_rich Low_complexity Low_complexity 1 32 0 192 61 20 61 chr5 199107 199156 -199430994 + (CCCCG)n Simple_repeat Simple_repeat 3 49 0 427 245 49 120 chr5 201175 201565 -199428585 - MLT1C LTR MaLR -7 383 15 414 296 0 0 chr5 202402 202742 -199427408 + (TG)n Simple_repeat Simple_repeat 1 340 0 3538 169 35 1 chr5 203403 204112 -199426038 + L1PB4 LINE L1 3517 4249 -1897 1797 147 32 32 chr5 204117 204463 -199425687 - THE1B LTR MaLR -18 346 1 4463 172 56 2 chr5 204464 206280 -199423870 + L1PB4 LINE L1 4246 6149 -7 462 235 85 0 chr5 206451 206604 -199423546 + L1MEc LINE L1 735 900 -5496 984 236 31 64 chr5 206662 207175 -199422975 + L1MEc LINE L1 1002 1497 -4899 771 335 83 76 chr5 207179 207886 -199422264 - L1MDa LINE L1 -3374 3166 1600 270 122 0 0 chr5 207890 207931 -199422219 + MSTA LTR MaLR 379 419 -9 1161 157 19 0 chr5 207940 208156 -199421994 + MSTA-int LTR MaLR 1 220 -1431 1568 146 114 74 chr5 208156 208587 -199421563 + LTR7 LTR ERV1 1 448 -2 834 152 26 26 chr5 208591 208822 -199421328 + HERVH LTR ERV1 2 232 -7481 778 205 80 0 chr5 208955 209179 -199420971 - L1MEc LINE L1 -4260 2136 1895 468 255 20 7 chr5 209223 209376 -199420774 - L1MEc LINE L1 -6205 191 37 2359 84 0 0 chr5 209384 209682 -199420468 - AluY SINE Alu -13 298 1 227 229 71 64 chr5 209723 209863 -199420287 - HAL1b LINE L1 -13 1335 1195 234 258 174 23 chr5 210749 210881 -199419269 + L2 LINE L2 2963 3114 -158 2008 125 17 0 chr5 212743 213030 -199417120 + AluSq SINE Alu 4 295 -18 4422 115 63 9 chr5 213112 213765 -199416385 - LTR12 LTR ERV1 0 688 1 603 195 13 6 chr5 214678 214837 -199415313 + (TGGA)n Simple_repeat Simple_repeat 3 162 0 254 250 0 0 chr5 216275 216327 -199413823 + LTR30 LTR ERV1 1 52 -670 1067 130 140 23 chr5 216327 216581 -199413569 + LTR12 LTR ERV1 55 2032 -406 280 227 0 0 chr5 216582 216657 -199413493 + LTR30 LTR ERV1 553 627 -95 742 112 26 0 chr5 216657 216773 -199413377 + LTR12 LTR ERV1 362 480 -234 387 335 94 12 chr5 221023 221193 -199408957 + L1MC4 LINE L1 6459 6642 -1400 862 261 109 7 chr5 221200 221503 -199408647 - MER2 DNA MER2_type -8 337 4 653 251 32 58 chr5 222003 222099 -199408051 + L1MEc LINE L1 2125 2222 -4174 2262 100 0 3 chr5 222099 222398 -199407752 - AluSx SINE Alu -14 298 1 653 251 32 58 chr5 222398 222643 -199407507 + L1MEc LINE L1 2222 2457 -3939 * 1309 223 45 16 chr5 222640 223067 -199407083 + L1ME1 LINE L1 5723 6161 -5 2033 140 3 9 chr5 223253 223568 -199406582 + AluSq SINE Alu 1 313 0 29 60 0 0 chr5 226485 226535 -199403615 + GC_rich Low_complexity Low_complexity 1 50 0 22 99 0 0 chr5 226702 226773 -199403377 + GC_rich Low_complexity Low_complexity 1 71 0 21 0 0 0 chr5 226998 227019 -199403131 + GC_rich Low_complexity Low_complexity 1 21 0 2199 68 72 0 chr5 228244 228536 -199401614 - AluSp SINE Alu 0 313 1 254 234 54 72 chr5 232822 232933 -199397217 + L2 LINE L2 3205 3313 0 1026 135 3 22 chr5 232936 233303 -199396847 + (TGGA)n Simple_repeat Simple_repeat 1 360 0 891 187 5 18 chr5 233315 233754 -199396396 + (TGGA)n Simple_repeat Simple_repeat 1 433 0 290 336 0 10 chr5 233854 233958 -199396192 + (TGGG)n Simple_repeat Simple_repeat 1 103 0 387 312 89 7 chr5 233960 234144 -199396006 + MIR SINE MIR 3 200 -62 929 222 0 0 chr5 234437 234613 -199395537 + AluJb SINE Alu 136 311 -1 450 214 21 7 chr5 234627 234767 -199395383 + GA-rich Low_complexity Low_complexity 1 142 0 562 161 193 6 chr5 235849 236010 -199394140 - L1MC2 LINE L1 0 6344 6154 186 276 60 75 chr5 236659 236793 -199393357 + L3 LINE CR1 517 648 -929 1123 250 118 53 chr5 237835 238343 -199391807 - MLT1F LTR MaLR 0 542 2 2785 100 11 0 chr5 238374 238745 -199391405 - THE1C LTR MaLR 0 375 1 272 361 53 34 chr5 238756 238974 -199391176 - MIR3 SINE MIR -10 252 30 1138 248 42 121 chr5 242633 243509 -199386641 + L1M4 LINE L1 2755 3561 -2585 321 304 14 16 chr5 243532 243699 -199386451 - L1 LINE L1 -1722 4424 4260 841 156 13 26 chr5 243979 244133 -199386017 - AluJo SINE Alu -131 181 30 202 213 38 50 chr5 244320 244400 -199385750 + (CGGGG)n Simple_repeat Simple_repeat 1 79 0 28 0 0 0 chr5 244458 244486 -199385664 + GC_rich Low_complexity Low_complexity 1 28 0 230 279 243 29 chr5 246145 246281 -199383869 - MIR3 SINE MIR -26 182 18 197 211 19 0 chr5 246915 246967 -199383183 + (TAGA)n Simple_repeat Simple_repeat 3 55 0 2208 92 0 3 chr5 247305 247598 -199382552 + AluSc SINE Alu 1 292 -17 1906 154 0 22 chr5 247607 247926 -199382224 + AluJb SINE Alu 1 312 0 238 297 55 0 chr5 249090 249181 -199380969 + MER5A DNA MER1_type 14 109 -80 1983 96 17 7 chr5 250907 251200 -199378950 + AluY SINE Alu 1 296 -15 265 208 49 87 chr5 252526 252709 -199377441 + (CATCC)n Simple_repeat Simple_repeat 1 176 0 320 291 36 0 chr5 256765 256875 -199373275 + MIR SINE MIR 38 151 -111 180 111 0 0 chr5 258061 258088 -199372062 + (TG)n Simple_repeat Simple_repeat 2 28 0 210 37 0 0 chr5 261311 261338 -199368812 + (TTTTTG)n Simple_repeat Simple_repeat 3 29 0 347 250 56 12 chr5 262761 262941 -199367209 + L1MCa LINE L1 1690 1969 -4564 1604 88 22 9 chr5 263000 263227 -199366923 - MER30 DNA MER1_type 0 230 1 207 0 0 0 chr5 264016 264039 -199366111 + (CAA)n Simple_repeat Simple_repeat 2 24 0 241 202 147 9 chr5 264580 264689 -199365461 - L1MB8 LINE L1 -77 6101 5978 317 309 47 0 chr5 265549 265698 -199364452 + L1ME LINE L1 167 322 -5883 254 296 142 12 chr5 266102 266271 -199363879 + L1ME LINE L1 810 1000 -5396 541 231 54 51 chr5 266440 266700 -199363450 + MER4C LTR ERV1 275 683 -16 694 230 32 8 chr5 266742 266994 -199363156 + L1ME LINE L1 2788 3045 -3170 1739 133 158 142 chr5 266994 267718 -199362432 - LTR12 LTR ERV1 -133 2017 54 261 176 20 0 chr5 267718 267769 -199362381 - LTR30 LTR ERV1 -670 52 1 3492 257 79 19 chr5 267770 269313 -199360837 + L1ME LINE L1 3043 4677 -1538 279 304 0 10 chr5 269493 269595 -199360555 - MIR SINE MIR -72 136 36 4720 166 41 8 chr5 271544 272340 -199357810 - L1PA16 LINE L1 -9 6157 5298 2341 63 0 7 chr5 272340 272640 -199357510 - AluY SINE Alu -13 298 1 4720 166 41 8 chr5 272640 273153 -199356997 - L1PA16 LINE L1 -868 5298 4803 297 226 0 0 chr5 274987 275049 -199355101 - MLT1D LTR MaLR 0 505 444 245 195 57 98 chr5 275166 275289 -199354861 - MLT1D LTR MaLR -293 212 95 222 275 71 58 chr5 276690 276833 -199353317 - MIR SINE MIR -67 141 17 1068 178 32 9 chr5 277401 277620 -199352530 - MSTB LTR MaLR 0 426 203 1073 143 56 79 chr5 277985 278066 -199352084 - MSTB LTR MaLR -165 261 180 2251 99 0 10 chr5 278066 278368 -199351782 - AluSx SINE Alu -13 299 1 1073 143 56 79 chr5 278368 278552 -199351598 - MSTB LTR MaLR -246 180 2 384 271 6 41 chr5 280217 280387 -199349763 + (TG)n Simple_repeat Simple_repeat 1 164 0 298 224 40 0 chr5 281167 281243 -199348907 + G-rich Low_complexity Low_complexity 3 81 0 1736 229 53 28 chr5 286346 286875 -199343275 - MER6A DNA MER2_type -63 542 1 246 238 83 24 chr5 286943 287027 -199343123 + L1ME LINE L1 5340 5428 -807 237 274 27 0 chr5 287171 287244 -199342906 + L1ME LINE L1 5451 5525 -714 818 179 87 6 chr5 289054 289227 -199340923 - AluJo SINE Alu -10 302 116 247 316 155 0 chr5 290967 291122 -199339028 + MLT1E LTR MaLR 398 576 -17 400 335 103 49 chr5 292361 292906 -199337244 - L1MEc LINE L1 -2833 3549 944 1736 229 53 28 chr5 298040 298569 -199331581 - MER6A DNA MER2_type -63 542 1 246 238 83 24 chr5 298637 298721 -199331429 + L1ME LINE L1 5271 5359 -807 237 274 27 0 chr5 298865 298938 -199331212 + L1ME LINE L1 5382 5456 -706 818 179 87 6 chr5 300752 300925 -199329225 - AluJo SINE Alu -10 302 116 247 316 155 0 chr5 302816 302971 -199327179 + MLT1E LTR MaLR 398 576 -17 182 244 0 26 chr5 306554 306632 -199323518 + (CATA)n Simple_repeat Simple_repeat 3 78 0 2138 129 3 0 chr5 307137 307448 -199322702 - AluSx SINE Alu 0 312 1 397 279 41 0 chr5 307859 308006 -199322144 + MSTD LTR MaLR 1 153 -243 908 192 60 34 chr5 308147 308381 -199321769 + MSTD LTR MaLR 157 396 0 1269 123 5 0 chr5 308905 309092 -199321058 + AluSg/x SINE Alu 124 311 -1 475 254 58 5 chr5 309100 309289 -199320861 + L1M4 LINE L1 5132 5330 -816 343 288 136 30 chr5 314797 315033 -199315117 + L1M4 LINE L1 2 262 -6280 2407 276 83 17 chr5 315102 315631 -199314519 + L1M4 LINE L1 3754 4247 -2397 1627 168 24 30 chr5 315631 315929 -199314221 - AluJo SINE Alu -16 296 1 2407 276 83 17 chr5 315929 316386 -199313764 + L1M4 LINE L1 4247 4805 -1839 760 199 39 57 chr5 316421 316746 -199313404 + MLT1B LTR MaLR 21 337 -130 310 297 119 0 chr5 316965 317083 -199313067 + MER58B DNA MER1_type 210 341 0 2070 131 0 0 chr5 320392 320689 -199309461 + AluSx SINE Alu 1 297 -15 266 298 92 0 chr5 321297 321428 -199308722 - MIR SINE MIR -10 252 110 219 231 87 10 chr5 321865 321969 -199308181 - MIR SINE MIR -132 130 19 337 318 67 6 chr5 322622 322768 -199307382 - MIR SINE MIR -4 258 105 2146 175 107 5 chr5 323569 324009 -199306141 + MER31A LTR ERV1 1 485 0 1142 144 0 0 chr5 324575 324748 -199305402 - AluSg/x SINE Alu -6 304 132 677 87 77 29 chr5 324966 325070 -199305080 - AluSq/x SINE Alu -204 109 1 621 255 84 56 chr5 325109 325466 -199304684 + L1MDa LINE L1 20 386 -6154 196 77 51 0 chr5 325503 325542 -199304608 + (CA)n Simple_repeat Simple_repeat 1 41 0 333 0 0 0 chr5 325633 325670 -199304480 + (CA)n Simple_repeat Simple_repeat 1 37 0 1703 232 92 20 chr5 325866 327036 -199303114 + L1MDa LINE L1 1014 2098 -4442 2116 115 13 0 chr5 327036 327340 -199302810 + AluSq SINE Alu 3 310 -3 1703 232 92 20 chr5 327340 327806 -199302344 + L1MDa LINE L1 2098 3290 -3250 1094 74 0 4 chr5 327806 328021 -199302129 + AluY SINE Alu 1 302 -9 1143 223 67 5 chr5 328023 328413 -199301737 + L1MDa LINE L1 3282 3695 -2845 2027 191 57 17 chr5 328418 328798 -199301352 + LTR26 LTR ERV1 9 452 -151 2186 86 17 7 chr5 328798 329088 -199301062 + AluSx SINE Alu 1 293 -19 2027 191 57 17 chr5 329088 329247 -199300903 + LTR26 LTR ERV1 452 603 0 456 332 58 8 chr5 329260 329640 -199300510 + L1MDa LINE L1 3715 4113 -2427 635 320 59 69 chr5 330267 330658 -199299492 - L1MDa LINE L1 -4554 1986 1600 289 114 0 0 chr5 330660 330704 -199299446 + MSTA LTR MaLR 376 419 -9 1161 157 19 0 chr5 330713 330929 -199299221 + MSTA-int LTR MaLR 1 220 -1431 1621 144 114 74 chr5 330929 331360 -199298790 + LTR7 LTR ERV1 1 448 -2 15176 113 24 22 chr5 331362 334649 -199295501 + HERVH LTR ERV1 1 2987 -4726 715 182 20 0 chr5 334643 334791 -199295359 + HERVH LTR ERV1 3140 3290 -4423 * 3028 116 6 2 chr5 334790 335282 -199294868 + HERVH LTR ERV1 3500 3993 -3720 1470 123 4 48 chr5 335284 335552 -199294598 + HERVH LTR ERV1 4488 4743 -2970 1177 101 28 11 chr5 385558 385736 -199244414 + L1PA10 LINE L1 5978 6158 -10 2180 101 0 3 chr5 385791 386088 -199244062 + AluSg SINE Alu 1 296 -14 753 258 122 7 chr5 386304 386575 -199243575 + L1ME3A LINE L1 5584 5885 -285 205 178 0 0 chr5 386685 386730 -199243420 + A-rich Low_complexity Low_complexity 1 45 0 1971 101 39 3 chr5 386733 387019 -199243131 - AluSg SINE Alu -14 296 1 194 0 39 0 chr5 387378 387404 -199242746 + (TG)n Simple_repeat Simple_repeat 2 28 0 676 286 65 10 chr5 388067 388361 -199241789 - MER33 DNA MER1_type -8 316 7 653 306 8 35 chr5 389568 389823 -199240327 + L1MEd LINE L1 30 277 -5768 2917 250 82 14 chr5 389883 391276 -199238874 + L1MCb LINE L1 223 1689 -4854 2037 243 23 2 chr5 391276 391749 -199238401 + L1MC3 LINE L1 7302 7784 -1 22 0 0 0 chr5 391755 391777 -199238373 + AT_rich Low_complexity Low_complexity 1 22 0 263 329 0 0 chr5 392046 392125 -199238025 + MIR3 SINE MIR 110 188 -20 354 274 121 0 chr5 393334 393491 -199236659 + LTR52 LTR ERVL 167 342 -79 246 359 23 8 chr5 393729 393857 -199236293 + MIR3 SINE MIR 71 200 -8 556 271 39 0 chr5 396070 396225 -199233925 + MER69 DNA AcHobo 72 232 -2294 287 261 49 28 chr5 397764 397906 -199232244 + L1MEd LINE L1 438 582 -5972 943 292 124 71 chr5 397976 399035 -199231115 + L1MEd LINE L1 715 1846 -4718 2479 37 3 0 chr5 399035 399331 -199230819 - AluY SINE Alu -14 297 1 943 292 124 71 chr5 399331 399605 -199230545 + L1MEd LINE L1 1846 2104 -4460 * 2942 104 21 0 chr5 399604 400327 -199229823 + L1P4 LINE L1 4917 5652 -516 300 263 46 72 chr5 401433 401585 -199228565 - L1M4 LINE L1 -1201 4945 4798 1505 199 3 10 chr5 402307 402608 -199227542 + AluJo SINE Alu 1 299 -13 257 275 22 0 chr5 402728 402819 -199227331 + (CA)n Simple_repeat Simple_repeat 2 94 0 371 332 89 52 chr5 404457 404840 -199225310 + L1ME LINE L1 4622 5018 -1128 735 209 41 0 chr5 405258 405430 -199224720 + L1PBa LINE L1 6 184 -6679 2158 178 10 5 chr5 405805 406193 -199223957 + MLT1B LTR MaLR 1 390 0 1339 258 56 43 chr5 406197 406401 -199223749 - L1ME LINE L1 -487 5679 5479 675 175 0 44 chr5 406401 406538 -199223612 - FLAM_C SINE Alu 0 133 3 1339 258 56 43 chr5 406538 407202 -199222948 - L1ME LINE L1 -687 5479 4796 1367 228 3 10 chr5 407907 408205 -199221945 + AluJo SINE Alu 1 296 -16 300 257 29 0 chr5 408320 408425 -199221725 + (CA)n Simple_repeat Simple_repeat 2 109 0 25 0 0 0 chr5 408491 408516 -199221634 + AT_rich Low_complexity Low_complexity 1 25 0 779 226 17 6 chr5 409287 409464 -199220686 + L1PB1 LINE L1 6 184 -6679 12006 186 30 17 chr5 409467 411469 -199218681 + L1PB1 LINE L1 1109 3083 -3784 5780 54 15 15 chr5 411469 412214 -199217936 - SVA Other Other 0 1386 642 12006 186 30 17 chr5 412214 415036 -199215114 + L1PB1 LINE L1 3083 6030 -837 1721 160 3 3 chr5 415036 415340 -199214810 + AluSx SINE Alu 5 312 0 12006 186 30 17 chr5 415340 416190 -199213960 + L1PB1 LINE L1 6030 6867 0 2057 104 3 29 chr5 416213 416522 -199213628 + AluY SINE Alu 6 306 -5 368 297 191 19 chr5 416720 416976 -199213174 + L1ME LINE L1 5335 5634 -536 1187 207 23 80 chr5 417688 418075 -199212075 - L1ME LINE L1 -489 5660 5296 532 197 145 8 chr5 418088 418205 -199211945 - AluJo SINE Alu -178 134 2 792 180 6 25 chr5 418365 418526 -199211624 + Tigger1 DNA MER2_type 6 163 -2255 * 819 190 113 0 chr5 418507 418702 -199211448 + Tigger1 DNA MER2_type 2202 2418 0 2602 290 78 62 chr5 418704 420461 -199209689 - L1ME LINE L1 -946 5183 3397 1871 162 14 0 chr5 420511 420808 -199209342 + AluSx SINE Alu 1 301 -11 235 214 0 0 chr5 420920 420976 -199209174 + (CA)n Simple_repeat Simple_repeat 1 56 0 182 385 33 16 chr5 423085 423207 -199206943 - L2 LINE L2 -1 3271 3148 364 272 83 67 chr5 423819 424073 -199206077 - L1ME LINE L1 -5188 931 674 304 274 107 20 chr5 426594 426791 -199203359 - MLT1D LTR MaLR -259 246 33 417 298 0 41 chr5 427483 427792 -199202358 + G-rich Low_complexity Low_complexity 1 296 0 206 290 29 0 chr5 428080 428149 -199202001 - MIR SINE MIR -57 151 81 295 263 34 0 chr5 432490 432608 -199197542 + (CAGCC)n Simple_repeat Simple_repeat 1 122 0 196 141 47 12 chr5 432636 432721 -199197429 + (CAGCC)n Simple_repeat Simple_repeat 4 91 0 2185 110 0 0 chr5 435506 435815 -199194335 + AluSx SINE Alu 1 309 -3 361 284 40 57 chr5 440811 440987 -199189163 - L1MEc LINE L1 -1871 4344 4172 1290 255 154 19 chr5 441041 442132 -199188018 - L1MEc LINE L1 -2932 3283 2058 481 205 150 0 chr5 442133 442260 -199187890 - MER3 DNA MER1_type 0 209 64 1055 256 59 20 chr5 442262 442808 -199187342 - L1MEc LINE L1 -5170 1226 660 279 299 52 0 chr5 442889 442986 -199187164 + MER58B DNA MER1_type 234 335 -6 1640 159 26 16 chr5 445547 445855 -199184295 - AluJo SINE Alu -1 311 1 1983 126 161 34 chr5 449012 449344 -199180806 + MSTA LTR MaLR 1 389 -39 2218 81 0 3 chr5 449344 449648 -199180502 + AluSq SINE Alu 1 303 0 1983 126 161 34 chr5 449648 449694 -199180456 + MSTA LTR MaLR 389 428 0 9946 134 9 40 chr5 449696 451324 -199178826 + MSTA-int LTR MaLR 3 1580 0 1132 152 140 16 chr5 451324 451581 -199178569 + MSTA LTR MaLR 1 289 -139 341 336 35 0 chr5 452029 452172 -199177978 - MER34 LTR ERV1 -39 503 356 1283 189 261 3 chr5 452176 452552 -199177598 + MER101 LTR ERV1 1 473 -1 461 235 53 8 chr5 452612 452744 -199177406 - MER34 LTR ERV1 -285 257 120 1751 148 195 11 chr5 454344 454703 -199175447 - MSTA LTR MaLR 0 428 4 8648 130 18 52 chr5 454711 455918 -199174232 - MSTA-int LTR MaLR -5 1575 436 1899 145 9 28 chr5 455918 456236 -199173914 + AluSx SINE Alu 1 312 0 8648 130 18 52 chr5 456236 456656 -199173494 - MSTA-int LTR MaLR -1144 436 3 1676 154 222 3 chr5 456658 457009 -199173141 - MSTA LTR MaLR 0 428 1 2026 119 7 0 chr5 458960 459254 -199170896 + AluSx SINE Alu 1 296 -16 424 337 137 4 chr5 459729 459978 -199170172 - L1M4 LINE L1 -3063 3083 2802 229 319 36 0 chr5 459980 460118 -199170032 - L1MC4 LINE L1 -937 7105 6963 429 180 79 29 chr5 460190 460329 -199169821 - L1ME3A LINE L1 -5 6165 6020 831 227 122 18 chr5 460356 460691 -199169459 - MLT1B LTR MaLR 0 390 21 356 114 102 24 chr5 460946 461112 -199169038 + (CA)n Simple_repeat Simple_repeat 1 179 0 * 394 173 48 30 chr5 461017 461185 -199168965 + (CACAA)n Simple_repeat Simple_repeat 1 171 0 * 428 139 32 86 chr5 461061 461292 -199168858 + (CACAC)n Simple_repeat Simple_repeat 1 218 0 241 120 48 60 chr5 461402 461569 -199168581 + (CACAC)n Simple_repeat Simple_repeat 1 165 0 229 134 79 8 chr5 461607 461734 -199168416 + (CA)n Simple_repeat Simple_repeat 1 136 0 711 264 58 55 chr5 465148 465496 -199164654 - MLT1A1 LTR MaLR -1 364 16 325 291 28 22 chr5 465546 465725 -199164425 + (CA)n Simple_repeat Simple_repeat 1 180 0 251 213 8 63 chr5 465666 465793 -199164357 + C-rich Low_complexity Low_complexity 3 122 0 * 517 199 140 23 chr5 467272 467443 -199162707 - MSTB2 LTR MaLR -13 444 229 21 36 0 0 chr5 469059 469087 -199161063 + AT_rich Low_complexity Low_complexity 1 28 0 403 359 122 17 chr5 470830 471067 -199159083 + L1MEc LINE L1 848 1109 -5454 7613 140 45 44 chr5 471075 472593 -199157557 + MSTA-int LTR MaLR 61 1580 0 2003 150 145 18 chr5 472593 472973 -199157177 + MSTA LTR MaLR 1 428 0 761 247 148 3 chr5 473187 473470 -199156680 + MER68 LTR ERV1 164 487 -75 953 255 116 23 chr5 473589 473760 -199156390 - MER21B LTR ERV1 -191 672 518 4829 176 39 14 chr5 473760 474641 -199155509 + MER4D LTR ERV1 1 903 0 953 255 116 23 chr5 474641 474857 -199155293 - MER21B LTR ERV1 -345 518 249 535 208 69 0 chr5 474857 474987 -199155163 - MER21B LTR ERV1 -705 158 20 3524 153 27 73 chr5 477312 477549 -199152601 + LTR39 LTR ERV1 16 262 -521 1955 129 0 7 chr5 477549 477836 -199152314 + AluSx SINE Alu 28 312 0 3524 153 27 73 chr5 477836 478403 -199151747 + LTR39 LTR ERV1 262 783 0 820 170 78 0 chr5 478747 478900 -199151250 - AluJb SINE Alu -12 300 136 426 283 104 0 chr5 478901 479152 -199150998 - MER33 DNA MER1_type -44 280 4 486 319 76 34 chr5 479217 479480 -199150670 + L1MEc LINE L1 1040 1313 -5250 288 281 102 15 chr5 479557 479760 -199150390 + L1MEc LINE L1 1271 1592 -4790 502 307 49 0 chr5 479776 479939 -199150211 - MER58C DNA MER1_type -18 197 27 2275 81 3 3 chr5 479989 480286 -199149864 - AluY SINE Alu -14 297 1 391 309 42 13 chr5 480325 480561 -199149589 + L1MEc LINE L1 1731 1973 -4590 1086 186 85 80 chr5 482322 482699 -199147451 + MLT1B LTR MaLR 1 379 -11 380 217 46 53 chr5 483514 483666 -199146484 - MER20 DNA MER1_type -63 156 6 360 228 22 11 chr5 486739 486831 -199143319 + L1MC4a LINE L1 6678 6770 -1038 418 322 65 0 chr5 487869 488068 -199142082 + Charlie5 DNA MER1_type 2366 2577 -35 239 310 100 0 chr5 490233 490333 -199139817 + Tigger5 DNA MER2_type 98 207 -2116 879 141 49 22 chr5 494669 494854 -199135296 + AluJo SINE Alu 115 304 -8 496 216 105 26 chr5 495422 495575 -199134575 - MER58C DNA MER1_type -3 212 48 200 35 35 0 chr5 496327 496356 -199133794 + (TTC)n Simple_repeat Simple_repeat 2 31 0 25 31 0 0 chr5 497297 497329 -199132821 + GC_rich Low_complexity Low_complexity 1 32 0 524 336 66 20 chr5 499087 499331 -199130819 - MIR SINE MIR 0 262 8 242 299 26 0 chr5 499883 499960 -199130190 - L2 LINE L2 0 3313 3235 250 288 38 23 chr5 500468 500600 -199129550 + L1M1 LINE L1 5695 5828 -476 1459 194 13 22 chr5 500671 500985 -199129165 + AluJo SINE Alu 1 311 -1 2244 78 6 34 chr5 505053 505374 -199124776 - AluSx SINE Alu 0 312 1 546 147 69 17 chr5 505417 505533 -199124617 - Tigger7 DNA MER2_type -21 2470 2349 192 40 0 0 chr5 505634 505659 -199124491 + (TTTTG)n Simple_repeat Simple_repeat 4 28 0 8641 38 13 0 chr5 506037 507031 -199123119 - LTR13 LTR ERVK 0 1007 1 375 250 109 26 chr5 507768 507937 -199122213 - L1MEc LINE L1 -3309 2906 2723 1769 316 88 28 chr5 507988 509222 -199120928 - L1MEc LINE L1 -5056 1340 32 1252 167 115 15 chr5 509390 509659 -199120491 + AluJb SINE Alu 7 302 -10 2379 69 0 13 chr5 512128 512433 -199117717 + AluY SINE Alu 1 301 -10 3819 103 2 6 chr5 512987 513500 -199116650 - MER9 LTR ERVK 0 511 1 245 347 0 49 chr5 514520 514664 -199115486 - L2 LINE L2 -52 3261 3125 2448 53 0 0 chr5 514741 515042 -199115108 + AluY SINE Alu 1 301 -10 2014 129 7 3 chr5 516803 517105 -199113045 - AluSx SINE Alu -7 305 3 180 167 0 71 chr5 517503 517545 -199112605 + MIR SINE MIR 34 72 -136 201 74 0 0 chr5 518172 518199 -199111951 + (TG)n Simple_repeat Simple_repeat 1 27 0 23 0 0 0 chr5 521315 521338 -199108812 + AT_rich Low_complexity Low_complexity 1 23 0 3499 57 16 11 chr5 522028 522470 -199107680 - MLT2A1 LTR ERVL 0 444 1 319 296 45 62 chr5 523224 523400 -199106750 - L1M4 LINE L1 -1871 4275 4103 530 290 163 23 chr5 523420 523727 -199106423 - L1M4 LINE L1 -2885 3261 2912 1988 126 161 34 chr5 524377 524709 -199105441 + MSTA LTR MaLR 1 389 -39 2192 81 0 3 chr5 524709 525013 -199105137 + AluSq SINE Alu 1 303 0 1988 126 161 34 chr5 525013 525059 -199105091 + MSTA LTR MaLR 389 428 0 9889 133 9 41 chr5 525061 526691 -199103459 + MSTA-int LTR MaLR 3 1580 0 753 123 227 7 chr5 526691 526845 -199103305 + MSTA LTR MaLR 1 188 -240 196 141 47 12 chr5 528401 528486 -199101664 + (GGCTG)n Simple_repeat Simple_repeat 4 91 0 295 263 34 0 chr5 528514 528632 -199101518 + (GGCTG)n Simple_repeat Simple_repeat 1 122 0 2115 118 0 3 chr5 528998 529311 -199100839 + AluSx SINE Alu 1 312 0 2864 176 19 30 chr5 529311 529878 -199100272 + LTR39 LTR ERV1 223 783 0 862 170 78 0 chr5 530222 530375 -199099775 - AluJb SINE Alu -12 300 136 469 283 104 0 chr5 530376 530627 -199099523 - MER33 DNA MER1_type -44 280 4 309 300 80 33 chr5 530692 530842 -199099308 + L1MEc LINE L1 873 1029 -5367 304 212 153 0 chr5 531260 531345 -199098805 - L2 LINE L2 -3 3269 3172 693 194 0 0 chr5 531956 532116 -199098034 + (TG)n Simple_repeat Simple_repeat 1 160 0 513 244 0 0 chr5 533135 533295 -199096855 + (TG)n Simple_repeat Simple_repeat 1 160 0 2372 74 0 0 chr5 533941 534240 -199095910 - AluY SINE Alu -12 299 1 290 234 76 10 chr5 534349 534528 -199095622 - MSTC LTR MaLR -208 188 1 388 121 22 22 chr5 534582 534673 -199095477 + (TCTCTG)n Simple_repeat Simple_repeat 2 92 0 267 237 36 5 chr5 534673 534892 -199095258 - Harlequin LTR ERV1 -5805 1091 866 359 174 27 27 chr5 534896 535045 -199095105 + (TCTCTG)n Simple_repeat Simple_repeat 2 150 0 550 326 23 19 chr5 535070 535328 -199094822 - L1M4 LINE L1 -2010 4136 3878 183 243 0 0 chr5 535427 535464 -199094686 + MIR SINE MIR 108 144 -118 184 176 0 0 chr5 538644 538678 -199091472 + MIR SINE MIR 109 142 -120 413 214 200 39 chr5 540568 540853 -199089297 - MLT1F1 LTR MaLR -93 474 144 399 283 53 23 chr5 541072 541362 -199088788 - MLT1F1 LTR MaLR -230 337 27 239 374 52 7 chr5 544743 544898 -199085252 - MIR SINE MIR -2 260 99 2367 296 96 9 chr5 545237 545800 -199084350 - L1MC4a LINE L1 0 7808 7295 1458 187 8 0 chr5 545800 546067 -199084083 - AluJb SINE Alu -4 308 40 2367 296 96 9 chr5 546067 546568 -199083582 - L1MC4a LINE L1 -513 7295 6652 24 0 0 0 chr5 546599 546623 -199083527 + AT_rich Low_complexity Low_complexity 1 24 0 338 362 83 24 chr5 546979 547402 -199082748 + L1MEd LINE L1 499 946 -5173 415 301 112 56 chr5 547478 547892 -199082258 + L1MEd LINE L1 960 1581 -909 366 255 13 27 chr5 547892 548041 -199082109 + L1MA10 LINE L1 6188 6334 0 366 394 5 23 chr5 548045 548240 -199081910 + L1MDb LINE L1 1194 1394 -5002 544 373 106 32 chr5 548293 548698 -199081452 + L1MDb LINE L1 1561 1995 -4592 997 314 134 23 chr5 549117 549954 -199080196 + L1MDb LINE L1 2402 3411 -2995 2415 70 0 0 chr5 549954 550252 -199079898 + AluY SINE Alu 1 298 -13 997 314 134 23 chr5 550252 550599 -199079551 + L1MDb LINE L1 3411 3718 -2688 * 4255 175 12 3 chr5 550593 551491 -199078659 + L1PA14 LINE L1 4474 5379 -767 2648 62 3 0 chr5 551471 551845 -199078305 + L1PA8 LINE L1 5797 6171 -1 * 5309 95 2 5 chr5 551841 552653 -199077497 + L1PA14 LINE L1 5352 6161 0 1378 284 123 26 chr5 552691 552744 -199077406 + L1MDb LINE L1 3697 3743 -2663 1998 125 0 7 chr5 552744 553047 -199077103 + AluSc SINE Alu 1 301 0 1378 284 123 26 chr5 553047 553837 -199076313 + L1MDb LINE L1 3743 4623 -1783 1671 212 73 9 chr5 553855 553962 -199076188 + L1M3 LINE L1 5363 5462 -721 252 0 0 0 chr5 553962 553990 -199076160 + (TAA)n Simple_repeat Simple_repeat 2 29 0 1671 212 73 9 chr5 553990 554306 -199075844 + L1M3 LINE L1 5462 5813 -370 253 286 0 0 chr5 554308 554371 -199075779 + L1ME LINE L1 5748 5810 -354 256 286 0 0 chr5 554376 554439 -199075711 + L1ME LINE L1 5748 5810 -354 267 286 0 0 chr5 554512 554575 -199075575 + L1ME LINE L1 5748 5810 -354 248 302 0 0 chr5 554580 554643 -199075507 + L1ME LINE L1 5745 5807 -359 289 242 0 0 chr5 554648 554714 -199075436 + L1M3 LINE L1 5748 5813 -370 291 242 0 0 chr5 554716 554782 -199075368 + L1M2 LINE L1 5748 5813 -478 266 254 0 0 chr5 554784 554847 -199075303 + L1M4 LINE L1 5748 5810 -368 230 302 0 0 chr5 554852 554915 -199075235 + L1ME LINE L1 5748 5810 -354 280 258 0 0 chr5 554920 554986 -199075164 + L1M2 LINE L1 5748 5813 -478 267 286 0 0 chr5 554988 555051 -199075099 + L1ME LINE L1 5745 5807 -359 254 286 0 0 chr5 555124 555187 -199074963 + L1ME LINE L1 5748 5810 -354 254 286 0 0 chr5 555192 555255 -199074895 + L1ME LINE L1 5748 5810 -354 254 286 0 0 chr5 555260 555323 -199074827 + L1ME LINE L1 5748 5810 -354 271 270 0 0 chr5 555328 555391 -199074759 + L1ME LINE L1 5748 5810 -354 2217 189 33 2 chr5 555396 555819 -199074331 + L1MB3 LINE L1 5748 6183 0 2202 256 133 5 chr5 556987 557734 -199072416 - L1MA4 LINE L1 0 6300 5459 672 200 0 0 chr5 558321 558481 -199071669 + (CA)n Simple_repeat Simple_repeat 1 160 0 313 212 153 0 chr5 559092 559177 -199070973 + L2 LINE L2 3172 3269 -3 842 55 47 12 chr5 562906 563250 -199066900 + (TG)n Simple_repeat Simple_repeat 1 356 0 363 334 68 50 chr5 563317 563681 -199066469 - L1ME LINE L1 -5011 1059 688 603 310 120 24 chr5 563999 564658 -199065492 + L1ME3A LINE L1 1231 1952 -4655 485 332 61 56 chr5 564712 565223 -199064927 + L1M2 LINE L1 1736 2243 -4605 3747 108 8 4 chr5 565223 565732 -199064418 - MER9 LTR ERVK 0 511 1 485 332 61 56 chr5 565732 565961 -199064189 + L1M2 LINE L1 2243 3497 -3351 1678 42 0 0 chr5 565961 566175 -199063975 - LTR14B LTR ERVK -394 214 1 912 283 80 11 chr5 566179 566618 -199063532 + L1M2 LINE L1 3980 4448 -2400 1584 194 8 8 chr5 566628 567005 -199063145 + L1M2 LINE L1 4972 5348 -1500 714 127 22 0 chr5 567003 567137 -199063013 - L1 LINE L1 -1369 4777 4641 * 447 184 0 0 chr5 567145 567232 -199062918 + GA-rich Low_complexity Low_complexity 1 87 0 302 338 62 14 chr5 567232 567377 -199062773 + L1ME3A LINE L1 2226 2377 -4049 616 232 90 0 chr5 567386 567541 -199062609 - MER93b LTR ERV1 -203 170 2 1139 306 117 9 chr5 567592 568155 -199061995 + L1ME3A LINE L1 5539 6162 -284 25 31 0 0 chr5 568339 568371 -199061779 + AT_rich Low_complexity Low_complexity 1 32 0 2147 103 3 10 chr5 568374 568507 -199061643 + AluY SINE Alu 1 133 -178 2070 130 0 16 chr5 568507 568822 -199061328 + AluSg SINE Alu 1 310 0 2147 103 3 10 chr5 568822 568989 -199061161 + AluY SINE Alu 133 299 -12 674 252 34 17 chr5 569936 570174 -199059976 + L1MCa LINE L1 2640 2881 -3545 1188 54 0 0 chr5 570179 570326 -199059824 + AluY SINE Alu 158 304 -7 2223 77 0 13 chr5 570400 570698 -199059452 - AluY SINE Alu -17 294 1 26 0 0 0 chr5 571637 571663 -199058487 + AT_rich Low_complexity Low_complexity 1 26 0 2501 46 10 0 chr5 572506 572809 -199057341 + AluY SINE Alu 1 306 -5 285 191 38 30 chr5 573380 573511 -199056639 + GA-rich Low_complexity Low_complexity 5 136 0 595 171 26 0 chr5 573623 573740 -199056410 - MER45A DNA AcHobo 0 178 59 243 293 0 13 chr5 573819 573894 -199056256 + (TG)n Simple_repeat Simple_repeat 1 74 0 2012 136 0 7 chr5 575274 575583 -199054567 + AluSx SINE Alu 1 307 -5 607 356 99 55 chr5 575610 576123 -199054027 + L1ME4a LINE L1 5304 5846 -275 2526 227 94 21 chr5 576123 576796 -199053354 + MER72 LTR ERV1 1 722 0 607 356 99 55 chr5 576796 576860 -199053290 + L1ME4a LINE L1 5846 5906 -215 259 221 96 19 chr5 576887 576991 -199053159 + L1ME4a LINE L1 6009 6120 -1 187 114 45 0 chr5 577549 577593 -199052557 + GA-rich Low_complexity Low_complexity 3 48 0 338 303 9 9 chr5 579193 579302 -199050848 + Charlie7 DNA MER1_type 335 443 -2169 2031 98 7 11 chr5 580482 580794 -199049356 + AluSx SINE Alu 1 311 0 2101 87 6 81 chr5 581982 582317 -199047833 + AluSx SINE Alu 1 310 -2 336 24 0 0 chr5 583591 583632 -199046518 + (TG)n Simple_repeat Simple_repeat 1 41 0 23 0 0 0 chr5 584280 584303 -199045847 + GC_rich Low_complexity Low_complexity 1 23 0 21 82 0 0 chr5 584338 584387 -199045763 + GC_rich Low_complexity Low_complexity 1 49 0 238 161 16 65 chr5 585929 585991 -199044159 + L1MB8 LINE L1 6120 6178 0 24 32 0 0 chr5 588119 588150 -199042000 + GC_rich Low_complexity Low_complexity 1 31 0 22 106 0 0 chr5 588214 588299 -199041851 + GC_rich Low_complexity Low_complexity 1 85 0 21 36 0 0 chr5 588352 588380 -199041770 + GC_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr5 588404 588435 -199041715 + GC_rich Low_complexity Low_complexity 1 31 0 192 40 0 0 chr5 588478 588503 -199041647 + (CGGG)n Simple_repeat Simple_repeat 2 26 0 27 29 0 0 chr5 588611 588645 -199041505 + GC_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr5 597395 597416 -199032734 + AT_rich Low_complexity Low_complexity 1 21 0 205 330 29 10 chr5 597707 597810 -199032340 + (CATA)n Simple_repeat Simple_repeat 3 107 0 * 215 314 0 14 chr5 597742 597812 -199032338 + (CATATA)n Simple_repeat Simple_repeat 3 71 0 566 220 6 12 chr5 600443 601088 -199029062 + (CTCA)n Simple_repeat Simple_repeat 1 641 0 466 241 6 6 chr5 601452 601782 -199028368 + (CTCA)n Simple_repeat Simple_repeat 1 330 0 206 231 15 0 chr5 601814 601879 -199028271 + (CTCA)n Simple_repeat Simple_repeat 2 67 0 263 245 11 0 chr5 601981 602075 -199028075 + (TTCA)n Simple_repeat Simple_repeat 1 95 0 1990 156 38 26 chr5 602668 602903 -199027247 - MSTB LTR MaLR 0 426 182 2166 139 18 0 chr5 602903 603234 -199026916 - MER1B DNA MER1_type 0 337 1 1990 156 38 26 chr5 603234 603415 -199026735 - MSTB LTR MaLR -244 182 5 501 183 26 0 chr5 603406 603521 -199026629 - MSTB LTR MaLR -304 122 5 * 501 183 26 0 chr5 603512 603627 -199026523 - MSTB LTR MaLR -304 122 5 252 149 60 0 chr5 603618 603685 -199026465 - MSTB2 LTR MaLR -319 138 68 * 2116 115 3 6 chr5 606489 606802 -199023348 - AluSx SINE Alu 0 312 1 374 289 66 68 chr5 608044 608480 -199021670 - MLT1D LTR MaLR -3 464 1 567 283 60 92 chr5 608493 608861 -199021289 - MLT1D-int LTR MaLR -15 1356 1001 223 354 12 6 chr5 609897 610061 -199020089 + C-rich Low_complexity Low_complexity 3 167 0 * 272 193 0 86 chr5 609957 610154 -199019996 + CT-rich Low_complexity Low_complexity 1 180 0 * 410 145 0 88 chr5 610015 610380 -199019770 + (CCTCG)n Simple_repeat Simple_repeat 1 332 0 372 270 22 28 chr5 611175 611411 -199018739 + G-rich Low_complexity Low_complexity 1 234 0 444 180 81 12 chr5 613407 613568 -199016582 + (CCCCAG)n Simple_repeat Simple_repeat 6 177 0 765 208 0 0 chr5 614017 614195 -199015955 + (CTCA)n Simple_repeat Simple_repeat 1 178 0 210 315 0 14 chr5 621675 621748 -199008402 + G-rich Low_complexity Low_complexity 4 75 0 47 104 0 0 chr5 624018 624191 -199005959 + GC_rich Low_complexity Low_complexity 1 173 0 1643 98 102 70 chr5 625875 626160 -199003990 - AluSx SINE Alu -15 297 4 240 366 12 6 chr5 632067 632239 -198997911 + (TATG)n Simple_repeat Simple_repeat 1 173 0 * 309 336 0 0 chr5 632164 632277 -198997873 + (TG)n Simple_repeat Simple_repeat 1 113 0 183 42 0 0 chr5 635962 635986 -198994164 + (CACCC)n Simple_repeat Simple_repeat 4 27 0 2111 118 10 0 chr5 837892 838181 -198791969 + AluSx SINE Alu 1 292 -20 2230 104 13 16 chr5 838541 838850 -198791300 + AluSx SINE Alu 1 308 -4 242 282 42 0 chr5 839330 839401 -198790749 + MIR SINE MIR 29 102 -160 855 275 84 10 chr5 839439 839910 -198790240 + MER68 LTR ERV1 12 557 -5 213 303 15 0 chr5 839917 839983 -198790167 + MIR SINE MIR 147 213 -49 195 254 167 53 chr5 843636 843750 -198786400 + MIR3 SINE MIR 3 129 -79 2297 215 120 38 chr5 843753 844701 -198785449 + L1MC/D LINE L1 16 1360 -5180 926 297 129 11 chr5 844984 845425 -198784725 + L1MC/D LINE L1 4106 4598 -1942 1315 242 33 41 chr5 845438 845925 -198784225 + L1MC/D LINE L1 5375 5861 -743 1676 178 3 18 chr5 848436 848722 -198781428 - AluJo SINE Alu -30 282 1 812 218 35 44 chr5 848742 848971 -198781179 - AluJo SINE Alu -1 311 85 517 233 62 11 chr5 848971 849147 -198781003 - AluJb SINE Alu -62 250 66 4662 147 14 1 chr5 849505 850274 -198779876 + Tigger1 DNA MER2_type 75 853 -1565 1024 147 21 16 chr5 854182 854372 -198775778 + L1PB4 LINE L1 5958 6148 -8 6833 134 36 8 chr5 859078 860275 -198769875 + Tigger1 DNA MER2_type 971 2201 -217 3880 171 28 52 chr5 860582 861499 -198768651 - L1MC1 LINE L1 0 6333 5439 1810 129 0 80 chr5 862153 862311 -198767839 + AluSx SINE Alu 1 121 -191 2583 82 0 9 chr5 862311 862627 -198767523 + AluSp SINE Alu 1 313 0 1810 129 0 80 chr5 862627 862794 -198767356 + AluSx SINE Alu 121 300 -12 355 203 37 0 chr5 862818 862903 -198767247 + AluJ/FLAM SINE Alu 11 88 -214 2047 119 3 52 chr5 863085 863413 -198766737 - AluSx SINE Alu 0 312 1 1024 106 0 28 chr5 863418 863560 -198766590 - FRAM SINE Alu -15 161 24 1288 119 0 11 chr5 863712 863897 -198766253 - AluSg/x SINE Alu -9 301 119 964 117 37 19 chr5 863899 864061 -198766089 - AluSg/x SINE Alu -23 287 123 328 287 57 38 chr5 864084 864241 -198765909 + L1MDa LINE L1 2020 2179 -4361 192 162 0 147 chr5 867209 867277 -198762873 + MIR SINE MIR 161 218 -44 746 248 221 34 chr5 867361 867858 -198762292 - MLT1G LTR MaLR 0 590 1 2009 120 39 0 chr5 868022 868305 -198761845 + AluSx SINE Alu 1 294 -18 581 235 6 0 chr5 868566 868745 -198761405 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 267 152 0 0 chr5 868768 868814 -198761336 + (TCCA)n Simple_repeat Simple_repeat 4 49 0 2343 98 0 3 chr5 868817 869114 -198761036 - AluSx SINE Alu -16 296 1 2063 96 0 14 chr5 869168 869448 -198760702 - AluSx SINE Alu -11 301 26 1280 175 62 15 chr5 871476 871781 -198758369 - AluSx SINE Alu 0 329 12 526 125 0 153 chr5 875631 875775 -198754375 - AluJb SINE Alu -189 123 2 1838 122 15 4 chr5 876195 876466 -198753684 - AluSx SINE Alu 0 312 39 1731 171 30 36 chr5 878485 878930 -198751220 + L1M4 LINE L1 5333 5775 -409 226 244 110 0 chr5 878973 879055 -198751095 - MIR SINE MIR -1 261 171 299 231 51 13 chr5 879267 879345 -198750805 - MLT1E3 LTR MaLR -293 237 157 556 122 11 22 chr5 881207 881320 -198748830 + AluSg/x SINE Alu 199 310 0 1978 148 0 10 chr5 881329 881639 -198748511 + AluSx SINE Alu 4 310 -2 271 250 16 0 chr5 881816 881880 -198748270 - Alu SINE Alu -22 279 215 23 0 0 0 chr5 882624 882647 -198747503 + GC_rich Low_complexity Low_complexity 1 23 0 366 23 0 0 chr5 883169 883212 -198746938 + (GAA)n Simple_repeat Simple_repeat 2 44 0 214 192 0 19 chr5 887611 887663 -198742487 + A-rich Low_complexity Low_complexity 3 53 0 255 310 18 9 chr5 887960 888073 -198742077 + GA-rich Low_complexity Low_complexity 3 116 0 472 190 100 0 chr5 888243 888343 -198741807 - MLT1E3 LTR MaLR -472 152 43 1213 203 132 33 chr5 888343 888782 -198741368 - MER66A LTR ERV1 0 478 97 1323 152 64 0 chr5 888861 889125 -198741025 - MER66A-int LTR ERV1 0 6676 6396 1583 128 48 93 chr5 889126 889523 -198740627 - MER66-int LTR ERV1 -1740 4936 4558 469 226 0 19 chr5 889524 889630 -198740520 - MER4D LTR ERV1 -712 160 57 495 99 165 8 chr5 889642 889763 -198740387 - MER66-int LTR ERV1 -2230 4446 4307 343 263 33 70 chr5 892735 892948 -198737202 - HAL1 LINE L1 -685 1822 1618 444 324 53 18 chr5 893382 893552 -198736598 - HAL1 LINE L1 -1300 1207 1032 1344 126 34 25 chr5 898132 898390 -198731760 - MER1B DNA MER1_type 0 339 119 697 171 13 7 chr5 900081 900239 -198729911 - MER1B DNA MER1_type -168 129 1 21 0 0 0 chr5 901424 901445 -198728705 + AT_rich Low_complexity Low_complexity 1 21 0 2165 105 0 25 chr5 902384 902698 -198727452 - AluSc SINE Alu -3 306 1 2182 114 3 0 chr5 903825 904124 -198726026 - AluSg SINE Alu -10 300 1 502 231 9 0 chr5 905211 905319 -198724831 - LTR55 LTR ERV -321 227 119 332 181 0 58 chr5 907672 907827 -198722323 + (CTGGGG)n Simple_repeat Simple_repeat 3 148 0 446 238 0 48 chr5 907857 908004 -198722146 + (CTGGGG)n Simple_repeat Simple_repeat 2 141 0 884 263 30 25 chr5 908005 908389 -198721761 - LTR24 LTR ERV1 0 532 186 1497 210 146 7 chr5 909864 910274 -198719876 - LTR24 LTR ERV1 0 467 1 1054 268 55 29 chr5 910494 910949 -198719201 - L1ME LINE L1 -2897 3183 2717 1592 196 76 10 chr5 910958 911355 -198718795 - MER50 LTR ERV1 0 734 312 552 253 179 16 chr5 911524 911832 -198718318 - MER50 LTR ERV1 -367 367 10 649 290 60 17 chr5 911871 912223 -198717927 - L1ME LINE L1 -3426 2654 2288 1051 215 119 10 chr5 912223 912534 -198717616 + MER2 DNA MER2_type 1 345 0 587 252 64 36 chr5 912541 912791 -198717359 - L1ME LINE L1 -3944 2317 2061 471 332 158 46 chr5 913166 913770 -198716380 - L1ME LINE L1 -4965 1089 472 553 279 107 32 chr5 914411 914775 -198715375 - HAL1 LINE L1 -367 2140 1720 1396 288 73 67 chr5 915997 916946 -198713204 + L1MEc LINE L1 29 986 -5410 2152 64 8 0 chr5 916946 917212 -198712938 + AluY SINE Alu 22 289 -22 1396 288 73 67 chr5 917212 917375 -198712775 + L1MEc LINE L1 986 1147 -5249 1077 191 70 8 chr5 917376 917414 -198712736 - MLT2B3 LTR ERVL 0 554 520 702 93 0 0 chr5 917414 917522 -198712628 + (TAGA)n Simple_repeat Simple_repeat 2 109 0 1077 191 70 8 chr5 917522 917740 -198712410 - MLT2B3 LTR ERVL -34 520 282 781 296 70 0 chr5 917763 918077 -198712073 + L1MEc LINE L1 1408 1743 -4653 340 58 0 19 chr5 918149 918201 -198711949 + MER75 DNA T2_type 464 514 0 724 182 0 54 chr5 918219 918367 -198711783 + AluJo SINE Alu 1 140 -172 598 251 166 19 chr5 918368 918675 -198711475 + L1MEc LINE L1 1863 2214 -4182 331 261 11 0 chr5 918783 918875 -198711275 + L1MA10 LINE L1 6233 6325 -9 240 179 0 36 chr5 923802 923858 -198706292 + (TCTCTG)n Simple_repeat Simple_repeat 4 57 0 431 216 6 0 chr5 923863 924030 -198706120 + CT-rich Low_complexity Low_complexity 1 168 0 268 263 12 0 chr5 926217 926297 -198703853 - MLT1H LTR MaLR -6 543 463 498 225 11 18 chr5 928935 929098 -198701052 - MER58 DNA MER1_type -2188 232 40 3360 204 39 68 chr5 931358 932343 -198697807 - LTR5 LTR ERVK -13 956 1 2111 118 10 0 chr5 936865 937154 -198692996 + AluSx SINE Alu 1 292 -20 2230 104 13 16 chr5 937513 937822 -198692328 + AluSx SINE Alu 1 308 -4 242 282 42 0 chr5 938302 938373 -198691777 + MIR SINE MIR 29 102 -160 877 273 84 10 chr5 938411 938882 -198691268 + MER68 LTR ERV1 12 557 -5 213 303 15 0 chr5 938889 938955 -198691195 + MIR SINE MIR 147 213 -49 195 254 167 53 chr5 942573 942687 -198687463 + MIR3 SINE MIR 3 129 -79 2160 214 124 41 chr5 942690 943638 -198686512 + L1MD1 LINE L1 16 1360 -5180 926 297 129 11 chr5 944390 944831 -198685319 + L1MD1 LINE L1 4106 4598 -1942 1315 242 33 41 chr5 944844 945331 -198684819 + L1MD1 LINE L1 5375 5861 -743 2667 191 35 9 chr5 948335 948915 -198681235 + L1MD1 LINE L1 5824 6418 -218 771 180 36 6 chr5 948928 949095 -198681055 + L1MD1 LINE L1 6465 6636 0 2378 85 0 0 chr5 949446 949740 -198680410 + AluSc SINE Alu 1 294 -15 1504 159 101 7 chr5 950758 951035 -198679115 - AluJb SINE Alu -9 303 1 281 277 76 25 chr5 951168 951287 -198678863 - MIR SINE MIR -50 212 88 186 267 0 56 chr5 951590 951680 -198678470 - L2 LINE L2 -5 3308 3224 1372 78 0 22 chr5 951683 951863 -198678287 + AluSc SINE Alu 134 309 0 617 206 0 0 chr5 951998 952124 -198678026 + MLT2B1 LTR ERVL 1 126 -394 219 231 0 39 chr5 953130 953208 -198676942 + (CGGGG)n Simple_repeat Simple_repeat 2 76 0 2533 64 0 3 chr5 955513 955810 -198674340 - AluY SINE Alu -15 296 1 2161 122 26 0 chr5 957033 957336 -198672814 - AluSx SINE Alu -1 311 1 231 324 37 37 chr5 959772 959908 -198670242 - MIR SINE MIR -10 252 117 427 253 121 22 chr5 960854 961036 -198669114 + MER3 DNA MER1_type 1 200 -9 192 244 44 0 chr5 961784 961829 -198668321 - MIR3 SINE MIR -52 156 110 3965 160 52 33 chr5 961977 962906 -198667244 + L1MA9 LINE L1 5152 6108 -204 797 183 119 29 chr5 963198 963443 -198666707 + L1MA9 LINE L1 6067 6307 -5 22 35 0 0 chr5 963458 963487 -198666663 + AT_rich Low_complexity Low_complexity 1 29 0 2201 121 3 7 chr5 963544 963850 -198666300 + AluSx SINE Alu 1 305 -7 2446 98 0 0 chr5 964479 964785 -198665365 + AluSx SINE Alu 1 306 -6 1759 183 0 32 chr5 965411 965722 -198664428 - AluJb SINE Alu -11 301 1 423 259 208 10 chr5 966048 966245 -198663905 + MIR SINE MIR 17 252 -10 2684 50 0 0 chr5 967343 967646 -198662504 + AluY SINE Alu 5 307 -4 1568 121 62 107 chr5 967678 968034 -198662116 - MER2 DNA MER2_type -5 340 1 361 289 35 0 chr5 968102 968216 -198661934 + L2 LINE L2 3194 3311 -2 2147 129 3 0 chr5 969231 969525 -198660625 - AluSx SINE Alu -17 295 1 1576 151 65 48 chr5 969858 970150 -198660000 - AluJo SINE Alu -15 297 1 404 235 39 0 chr5 971339 971441 -198658709 + L1ME1 LINE L1 5879 5984 -182 371 133 0 0 chr5 971649 971709 -198658441 - AluS SINE Alu -8 292 233 705 172 0 16 chr5 971709 971837 -198658313 - AluJo SINE Alu -152 160 35 2040 137 0 16 chr5 971878 972184 -198657966 + AluJb SINE Alu 1 301 -11 1870 131 31 17 chr5 972484 972775 -198657375 + AluSx SINE Alu 1 295 -17 21 57 0 19 chr5 972946 972976 -198657174 + AT_rich Low_complexity Low_complexity 1 31 -21 2261 115 3 0 chr5 972976 973271 -198656879 - AluSx SINE Alu -16 296 1 21 57 0 19 chr5 973271 973293 -198656857 + AT_rich Low_complexity Low_complexity 31 52 0 2190 180 43 24 chr5 973738 974205 -198655945 - L1PB4 LINE L1 -2 6154 5679 268 276 110 8 chr5 974479 974606 -198655544 - MLT1J LTR MaLR -279 232 93 459 263 51 0 chr5 974694 974812 -198655338 + MER3 DNA MER1_type 8 131 -78 199 298 91 33 chr5 975213 975334 -198654816 - L2 LINE L2 -3 3269 3142 2772 96 123 9 chr5 975397 975854 -198654296 + MER9 LTR ERVK 3 511 0 21229 74 6 3 chr5 975854 979082 -198651068 + HERVK9 LTR ERVK 1 3232 -2684 588 62 12 0 chr5 979073 979154 -198650996 + HERVK9 LTR ERVK 3154 3235 -2681 * 1050 123 0 0 chr5 979150 979305 -198650845 + HERVK9 LTR ERVK 3171 3325 -2591 364 159 0 0 chr5 979370 979439 -198650711 + HERVK9 LTR ERVK 3257 3325 -2591 * 388 167 56 22 chr5 979416 979506 -198650644 + HERVK9 LTR ERVK 3233 3325 -2591 * 402 136 0 0 chr5 979503 979569 -198650581 + HERVK9 LTR ERVK 3256 3321 -2595 372 171 0 0 chr5 979570 979640 -198650510 + HERVK9 LTR ERVK 3256 3325 -2591 * 393 152 0 0 chr5 979637 979703 -198650447 + HERVK9 LTR ERVK 3256 3321 -2595 1093 155 0 0 chr5 979704 979878 -198650272 + HERVK9 LTR ERVK 3256 3429 -2487 * 16454 89 20 0 chr5 979868 982154 -198647996 + HERVK9 LTR ERVK 3304 5634 -282 2033 117 36 6 chr5 982179 982524 -198647626 + HERVK9 LTR ERVK 5635 5916 0 3122 104 89 4 chr5 982525 982995 -198647155 + MER9 LTR ERVK 2 511 0 506 331 74 8 chr5 982996 983253 -198646897 + L1M4 LINE L1 4172 4445 -1701 2198 106 23 3 chr5 986633 986935 -198643215 - AluSx SINE Alu -4 308 1 1518 148 81 4 chr5 986979 987250 -198642900 + AluJb SINE Alu 1 292 -20 304 242 0 30 chr5 987257 987323 -198642827 + HAL1 LINE L1 1100 1163 -1344 1426 178 103 11 chr5 988646 988927 -198641223 - AluJb SINE Alu -5 307 1 1213 171 83 0 chr5 989075 989292 -198640858 - MER46A DNA MER2_type 0 236 2 1502 144 137 39 chr5 990005 990289 -198639861 - AluJo SINE Alu 0 312 1 709 178 89 13 chr5 990411 990568 -198639582 + MER1B DNA MER1_type 1 129 -168 225 57 57 0 chr5 991405 991440 -198638710 + MER1B DNA MER1_type 133 129 -168 276 81 0 0 chr5 991590 991627 -198638523 + MER1B DNA MER1_type 133 129 -168 243 108 0 0 chr5 991652 991689 -198638461 + MER1B DNA MER1_type 133 129 -168 226 139 0 0 chr5 991809 991845 -198638305 + MER1B DNA MER1_type 134 129 -168 226 139 0 0 chr5 991873 991909 -198638241 + MER1B DNA MER1_type 134 129 -168 1390 126 38 25 chr5 991981 992238 -198637912 + MER1B DNA MER1_type 119 339 0 397 321 55 18 chr5 996824 996989 -198633161 + HAL1 LINE L1 1037 1207 -1300 448 255 57 6 chr5 997423 997580 -198632570 + HAL1 LINE L1 1618 1782 -725 282 246 5 128 chr5 997658 997861 -198632289 + GA-rich Low_complexity Low_complexity 1 178 0 250 234 16 120 chr5 997827 998019 -198632131 + G-rich Low_complexity Low_complexity 5 176 0 * 380 153 34 117 chr5 997954 998254 -198631896 + GA-rich Low_complexity Low_complexity 1 275 0 384 188 76 168 chr5 998667 999024 -198631126 + LTR56 LTR ERV1 1 324 -121 230 239 30 0 chr5 999079 999146 -198631004 + LTR23 LTR ERV1 353 421 -16 183 100 0 0 chr5 1001749 1001779 -198628371 + (A)n Simple_repeat Simple_repeat 1 30 0 228 250 31 0 chr5 1001841 1001905 -198628245 + L1ME LINE L1 48 113 -5957 2257 110 0 7 chr5 1002097 1002397 -198627753 + AluSc SINE Alu 1 298 -11 1701 187 3 16 chr5 1002411 1002727 -198627423 + AluJb SINE Alu 1 312 0 1681 268 115 30 chr5 1002764 1003330 -198626820 + L1ME LINE L1 282 798 -5282 1894 122 93 34 chr5 1003330 1003684 -198626466 - THE1C LTR MaLR 0 375 1 1681 268 115 30 chr5 1003684 1003890 -198626260 + L1ME LINE L1 798 985 -5095 1673 215 0 0 chr5 1003890 1004202 -198625948 + AluJo SINE Alu 1 312 0 1681 268 115 30 chr5 1004202 1004560 -198625590 + L1ME LINE L1 985 1492 -4588 2716 214 142 1 chr5 1005077 1005891 -198624259 - L1ME1 LINE L1 -5 6161 5222 3480 191 36 3 chr5 1005905 1006619 -198623531 - L1MB3 LINE L1 -39 6144 5407 1792 112 4 27 chr5 1008968 1009228 -198620922 + AluSg SINE Alu 52 305 -5 289 228 21 98 chr5 1009705 1009898 -198620252 + (CA)n Simple_repeat Simple_repeat 2 179 0 342 210 10 115 chr5 1010052 1010252 -198619898 + (CA)n Simple_repeat Simple_repeat 2 180 0 290 279 52 23 chr5 1010316 1010488 -198619662 + (CA)n Simple_repeat Simple_repeat 2 178 0 14907 133 36 11 chr5 1013704 1014267 -198615883 - Tigger1 DNA MER2_type 0 2418 1871 1978 108 4 0 chr5 1014267 1014525 -198615625 - AluSx SINE Alu -15 297 39 14907 133 36 11 chr5 1014525 1016320 -198613830 - Tigger1 DNA MER2_type -547 1871 1 21 0 0 0 chr5 1017171 1017192 -198612958 + AT_rich Low_complexity Low_complexity 1 21 0 2230 112 7 0 chr5 1017377 1017672 -198612478 + AluSx SINE Alu 1 297 -15 235 300 103 25 chr5 1017856 1018099 -198612051 + L1ME LINE L1 2221 2482 -3598 299 160 120 0 chr5 1018312 1018387 -198611763 - L1MEc LINE L1 -4305 2091 2008 913 128 27 0 chr5 1018387 1018536 -198611614 - Tigger1 DNA MER2_type -750 1668 1516 2121 121 0 29 chr5 1018659 1018965 -198611185 - AluJb SINE Alu -15 297 1 428 248 223 34 chr5 1018965 1019110 -198611040 + L1ME LINE L1 2623 2739 -3341 889 77 77 8 chr5 1019110 1019240 -198610910 - MER85 DNA T2_type 0 139 1 428 248 223 34 chr5 1019240 1019300 -198610850 + L1ME LINE L1 2739 2867 -3213 1425 184 10 37 chr5 1019767 1020061 -198610089 + AluJo SINE Alu 1 286 -26 445 296 58 36 chr5 1020614 1020770 -198609380 + L1MEc LINE L1 825 976 -5229 2590 59 0 3 chr5 1020770 1021073 -198609077 + AluY SINE Alu 1 302 -9 445 296 58 36 chr5 1021073 1021400 -198608750 + L1MEc LINE L1 976 1224 -4981 1471 246 131 47 chr5 1021412 1022207 -198607943 + L1MEc LINE L1 1497 2224 -1640 315 0 0 0 chr5 1022207 1022242 -198607908 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2071 114 4 4 chr5 1022244 1022525 -198607625 - AluSx SINE Alu -31 281 1 1471 246 131 47 chr5 1022525 1023162 -198606988 + L1MEc LINE L1 2224 3000 -864 * 8333 182 77 32 chr5 1023155 1024655 -198605495 - L1M4 LINE L1 -2466 3916 2485 2166 99 25 0 chr5 1024655 1024939 -198605211 + AluSx SINE Alu 1 291 -21 8333 182 77 32 chr5 1024939 1026483 -198603667 - L1M4 LINE L1 -3897 2485 1012 3311 147 20 61 chr5 1026483 1027121 -198603029 - LTR9 LTR ERV1 0 612 1 8333 182 77 32 chr5 1027121 1027145 -198603005 - L1M4 LINE L1 -5370 1012 991 414 0 0 0 chr5 1027145 1027191 -198602959 + (TTA)n Simple_repeat Simple_repeat 3 48 0 8333 182 77 32 chr5 1027191 1027529 -198602621 - L1M4 LINE L1 -5391 991 670 4750 123 47 5 chr5 1027529 1028277 -198601873 - MER4E LTR ERV1 0 779 1 8333 182 77 32 chr5 1028277 1028588 -198601562 - L1M4 LINE L1 -5712 670 14 5002 158 56 8 chr5 1028610 1029472 -198600678 + MER4D LTR ERV1 1 903 0 198 71 0 0 chr5 1029872 1029900 -198600250 + (GA)n Simple_repeat Simple_repeat 2 29 0 331 253 65 84 chr5 1030067 1030221 -198599929 + L1M LINE L1 5274 5424 -2384 1917 79 16 4 chr5 1030925 1031179 -198598971 - L1PA6 LINE L1 0 6154 5898 200 204 34 34 chr5 1031314 1031402 -198598748 + GA-rich Low_complexity Low_complexity 1 88 0 384 188 76 168 chr5 1031815 1032172 -198597978 + LTR56 LTR ERV1 1 324 -121 230 239 30 0 chr5 1032227 1032294 -198597856 + LTR23 LTR ERV1 353 421 -16 183 100 0 0 chr5 1034897 1034927 -198595223 + (A)n Simple_repeat Simple_repeat 1 30 0 228 250 31 0 chr5 1034989 1035053 -198595097 + L1ME LINE L1 48 113 -5957 2257 110 0 7 chr5 1035245 1035545 -198594605 + AluSc SINE Alu 1 298 -11 1701 187 3 16 chr5 1035559 1035875 -198594275 + AluJb SINE Alu 1 312 0 1681 268 116 29 chr5 1035912 1036478 -198593672 + L1ME LINE L1 282 798 -5282 1894 122 93 34 chr5 1036478 1036832 -198593318 - THE1C LTR MaLR 0 375 1 1681 268 116 29 chr5 1036832 1037038 -198593112 + L1ME LINE L1 798 985 -5095 1673 215 0 0 chr5 1037038 1037350 -198592800 + AluJo SINE Alu 1 312 0 1681 268 116 29 chr5 1037350 1037700 -198592450 + L1ME LINE L1 985 1486 -4594 2878 204 166 1 chr5 1038224 1039032 -198591118 - L1ME1 LINE L1 -5 6161 5222 7154 196 31 18 chr5 1039046 1039990 -198590160 - L1MB3 LINE L1 -39 6144 5214 1914 176 7 0 chr5 1039990 1040285 -198589865 - AluJo SINE Alu -12 300 4 7154 196 31 18 chr5 1040285 1041858 -198588292 - L1MB3 LINE L1 -969 5214 3591 271 310 3 57 chr5 1042743 1042998 -198587152 + G-rich Low_complexity Low_complexity 1 241 0 306 346 0 13 chr5 1043188 1043347 -198586803 + G-rich Low_complexity Low_complexity 2 158 0 * 357 255 11 69 chr5 1043273 1043533 -198586617 + GA-rich Low_complexity Low_complexity 1 244 0 1418 159 13 4 chr5 1043895 1044127 -198586023 + AluJo SINE Alu 1 234 -78 743 83 19 0 chr5 1045357 1045465 -198584685 + HY1 scRNA scRNA 2 111 -1 881 101 0 25 chr5 1045484 1045603 -198584547 + AluJb SINE Alu 178 293 -19 319 257 47 0 chr5 1046830 1047001 -198583149 + (TG)n Simple_repeat Simple_repeat 1 179 0 266 238 33 26 chr5 1047036 1047187 -198582963 + (TG)n Simple_repeat Simple_repeat 1 152 0 189 0 0 0 chr5 1047820 1047841 -198582309 + (A)n Simple_repeat Simple_repeat 1 21 0 308 274 152 19 chr5 1047923 1048233 -198581917 + MLT1C LTR MaLR 45 395 -72 250 69 0 128 chr5 1048335 1048437 -198581713 + (TGGGGG)n Simple_repeat Simple_repeat 4 92 0 185 50 0 100 chr5 1048484 1048524 -198581626 + (TGGGGG)n Simple_repeat Simple_repeat 3 38 0 220 206 22 54 chr5 1048761 1048945 -198581205 + (CCCG)n Simple_repeat Simple_repeat 2 179 0 * 295 175 16 63 chr5 1048824 1048950 -198581200 + C-rich Low_complexity Low_complexity 5 124 0 253 258 162 0 chr5 1049516 1049683 -198580467 - L2 LINE L2 -253 3060 2867 683 269 126 31 chr5 1050362 1050719 -198579431 + L2 LINE L2 1712 2102 -1212 891 254 61 7 chr5 1050822 1051102 -198579048 - L1MB4 LINE L1 0 6180 5886 6236 217 49 15 chr5 1051103 1053218 -198576932 - L1MB4 LINE L1 -428 5752 3581 509 272 201 10 chr5 1053235 1053529 -198576621 + L2 LINE L2 2107 2456 -858 269 306 31 0 chr5 1053555 1053653 -198576497 - LTR67 LTR ERVL -22 535 435 219 297 16 16 chr5 1054390 1054454 -198575696 + L2 LINE L2 3125 3188 -84 347 297 35 0 chr5 1056313 1056458 -198573692 + G-rich Low_complexity Low_complexity 5 154 0 265 279 154 44 chr5 1057931 1058067 -198572083 - MIR SINE MIR -76 186 36 205 204 19 19 chr5 1058716 1058770 -198571380 + MIR SINE MIR 79 132 -130 217 250 26 53 chr5 1060123 1060199 -198569951 + MIR SINE MIR 189 262 0 834 164 0 0 chr5 1060826 1060966 -198569184 - L1MB5 LINE L1 -12 6162 6023 2456 218 36 14 chr5 1061294 1061927 -198568223 - L1MB5 LINE L1 -110 6064 5418 4653 217 51 38 chr5 1061963 1062325 -198567825 - L1MB5 LINE L1 -1002 5144 4788 2227 86 20 3 chr5 1062325 1062503 -198567647 - AluSc SINE Alu -2 307 121 387 0 0 0 chr5 1062503 1062546 -198567604 + (TG)n Simple_repeat Simple_repeat 2 44 0 2227 86 20 3 chr5 1062546 1062659 -198567491 - AluSc SINE Alu -188 121 11 4653 217 51 38 chr5 1062659 1062770 -198567380 - L1MB5 LINE L1 -1358 4788 4680 2268 106 0 3 chr5 1062770 1063063 -198567087 + AluSg SINE Alu 1 292 -18 297 0 0 0 chr5 1063066 1063099 -198567051 + (TA)n Simple_repeat Simple_repeat 2 34 0 4653 217 51 38 chr5 1063099 1064016 -198566134 - L1MB5 LINE L1 -1467 4679 3731 185 191 234 0 chr5 1064226 1064273 -198565877 + MIR SINE MIR 168 225 -37 192 247 161 25 chr5 1066791 1066872 -198563278 + MIR SINE MIR 168 259 -3 1195 135 0 42 chr5 1066909 1067124 -198563026 - MER75 DNA T2_type -306 208 3 1070 198 74 4 chr5 1067124 1067346 -198562804 + MSTA LTR MaLR 189 428 0 2132 144 52 12 chr5 1068175 1068578 -198561572 - L1MA4 LINE L1 -11 6289 5871 1792 112 4 27 chr5 1073744 1074004 -198556146 + AluSg SINE Alu 52 305 -5 289 228 21 98 chr5 1074481 1074674 -198555476 + (CA)n Simple_repeat Simple_repeat 2 179 0 342 210 10 115 chr5 1074828 1075028 -198555122 + (CA)n Simple_repeat Simple_repeat 2 180 0 269 299 46 17 chr5 1075092 1075266 -198554884 + (CA)n Simple_repeat Simple_repeat 2 180 0 14907 133 36 11 chr5 1078482 1079045 -198551105 - Tigger1 DNA MER2_type 0 2418 1871 1978 108 4 0 chr5 1079045 1079303 -198550847 - AluSx SINE Alu -15 297 39 14907 133 36 11 chr5 1079303 1081098 -198549052 - Tigger1 DNA MER2_type -547 1871 1 21 0 0 0 chr5 1081949 1081970 -198548180 + AT_rich Low_complexity Low_complexity 1 21 0 2230 112 7 0 chr5 1082155 1082450 -198547700 + AluSx SINE Alu 1 297 -15 250 296 103 25 chr5 1082634 1082877 -198547273 + L1M4 LINE L1 2287 2548 -3598 299 160 120 0 chr5 1083090 1083165 -198546985 - L1MEc LINE L1 -4305 2091 2008 913 128 27 0 chr5 1083165 1083314 -198546836 - Tigger1 DNA MER2_type -750 1668 1516 2131 121 0 29 chr5 1083437 1083744 -198546406 - AluJb SINE Alu -14 298 1 428 248 223 34 chr5 1083744 1083889 -198546261 + L1M4 LINE L1 2689 2805 -3341 889 77 77 8 chr5 1083889 1084019 -198546131 - MER85 DNA T2_type 0 139 1 428 248 223 34 chr5 1084019 1084079 -198546071 + L1M4 LINE L1 2805 2933 -3213 1425 184 10 37 chr5 1084546 1084840 -198545310 + AluJo SINE Alu 1 286 -26 445 296 58 36 chr5 1085393 1085549 -198544601 + L1MEc LINE L1 825 976 -5229 2590 59 0 3 chr5 1085549 1085852 -198544298 + AluY SINE Alu 1 302 -9 445 296 58 36 chr5 1085852 1086179 -198543971 + L1MEc LINE L1 976 1224 -4981 1467 249 129 47 chr5 1086191 1086986 -198543164 + L1MEc LINE L1 1497 2225 -1639 315 0 0 0 chr5 1086986 1087021 -198543129 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2071 114 4 4 chr5 1087023 1087304 -198542846 - AluSx SINE Alu -31 281 1 1467 249 129 47 chr5 1087304 1087941 -198542209 + L1MEc LINE L1 2225 3000 -864 * 10352 185 81 34 chr5 1087934 1089433 -198540717 - L1M4 LINE L1 -2466 3916 2489 2166 99 25 0 chr5 1089433 1089717 -198540433 + AluSx SINE Alu 1 291 -21 10352 185 81 34 chr5 1089717 1091261 -198538889 - L1M4 LINE L1 -3893 2489 1019 3311 147 20 61 chr5 1091261 1091899 -198538251 - LTR9 LTR ERV1 0 612 1 10352 185 81 34 chr5 1091899 1091922 -198538228 - L1M4 LINE L1 -5363 1019 999 360 0 0 0 chr5 1091922 1091962 -198538188 + (TTA)n Simple_repeat Simple_repeat 3 42 0 10352 185 81 34 chr5 1091962 1092300 -198537850 - L1M4 LINE L1 -5383 999 678 4750 123 47 5 chr5 1092300 1093048 -198537102 - MER4E LTR ERV1 0 779 1 10352 185 81 34 chr5 1093048 1093359 -198536791 - L1M4 LINE L1 -5704 678 14 5002 158 56 8 chr5 1093381 1094243 -198535907 + MER4D LTR ERV1 1 903 0 198 71 0 0 chr5 1094643 1094671 -198535479 + (GA)n Simple_repeat Simple_repeat 2 29 0 331 253 65 84 chr5 1094838 1094992 -198535158 + L1ME4a LINE L1 5274 5424 -2384 6120 57 5 4 chr5 1095696 1096489 -198533661 - L1PA6 LINE L1 0 6154 5361 1703 181 21 21 chr5 1096503 1096878 -198533272 + L1MB3 LINE L1 3893 4267 -1879 * 4716 222 7 3 chr5 1096864 1097983 -198532167 - L1PB1 LINE L1 -879 5267 4144 * 5519 75 19 82 chr5 1097978 1098495 -198531655 + L1PB1 LINE L1 5254 5802 -349 240 35 0 0 chr5 1098495 1098524 -198531626 + (CA)n Simple_repeat Simple_repeat 2 30 0 5519 75 19 82 chr5 1098524 1098609 -198531541 + L1PB1 LINE L1 5802 5891 -260 505 42 32 21 chr5 1098609 1098704 -198531446 + (TA)n Simple_repeat Simple_repeat 2 97 0 5519 75 19 82 chr5 1098704 1099059 -198531091 + L1PB1 LINE L1 5891 6151 0 2253 137 0 0 chr5 1099067 1099373 -198530777 + AluSx SINE Alu 3 308 -4 4437 193 32 67 chr5 1099375 1099489 -198530661 + L1MB3 LINE L1 4256 4372 -1811 2523 76 0 0 chr5 1099489 1099792 -198530358 + AluY SINE Alu 1 303 -8 4437 193 32 67 chr5 1099792 1099967 -198530183 + L1MB3 LINE L1 4372 4551 -1632 2271 101 3 3 chr5 1099967 1100265 -198529885 + AluY SINE Alu 1 298 -13 429 20 0 0 chr5 1100265 1100315 -198529835 + (TA)n Simple_repeat Simple_repeat 2 51 0 4437 193 32 67 chr5 1100315 1102007 -198528143 + L1MB3 LINE L1 4549 6166 -17 304 294 12 12 chr5 1103433 1103518 -198526632 + L1ME4a LINE L1 5838 5922 -199 276 221 11 46 chr5 1105393 1105684 -198524466 + GA-rich Low_complexity Low_complexity 1 280 0 1426 178 103 11 chr5 1106913 1107194 -198522956 - AluJb SINE Alu -5 307 1 1213 171 83 0 chr5 1107342 1107559 -198522591 - MER46A DNA MER2_type 0 236 2 1502 144 137 39 chr5 1108275 1108559 -198521591 - AluJo SINE Alu 0 312 1 709 178 89 13 chr5 1108681 1108838 -198521312 + MER1B DNA MER1_type 1 129 -168 276 81 0 0 chr5 1109861 1109898 -198520252 + MER1B DNA MER1_type 133 129 -168 243 108 0 0 chr5 1110047 1110084 -198520066 + MER1B DNA MER1_type 133 129 -168 235 111 0 0 chr5 1110144 1110180 -198519970 + MER1B DNA MER1_type 134 129 -168 243 108 0 0 chr5 1110271 1110308 -198519842 + MER1B DNA MER1_type 133 129 -168 237 108 0 0 chr5 1110303 1110340 -198519810 + MER1B DNA MER1_type 133 129 -168 * 243 108 0 0 chr5 1110431 1110468 -198519682 + MER1B DNA MER1_type 133 129 -168 239 62 0 0 chr5 1110463 1110495 -198519655 + MER1B DNA MER1_type 133 124 -173 * 225 132 0 0 chr5 1110622 1110660 -198519490 + MER1B DNA MER1_type 132 129 -168 225 132 0 0 chr5 1110750 1110788 -198519362 + MER1B DNA MER1_type 132 129 -168 235 111 0 0 chr5 1110880 1110916 -198519234 + MER1B DNA MER1_type 134 129 -168 243 108 0 0 chr5 1111039 1111076 -198519074 + MER1B DNA MER1_type 133 129 -168 243 108 0 0 chr5 1111071 1111108 -198519042 + MER1B DNA MER1_type 133 129 -168 243 108 0 0 chr5 1111103 1111140 -198519010 + MER1B DNA MER1_type 133 129 -168 243 108 0 0 chr5 1111135 1111172 -198518978 + MER1B DNA MER1_type 133 129 -168 235 111 0 0 chr5 1111553 1111589 -198518561 + MER1B DNA MER1_type 134 129 -168 243 108 0 0 chr5 1111616 1111653 -198518497 + MER1B DNA MER1_type 133 129 -168 244 108 0 0 chr5 1111776 1111813 -198518337 + MER1B DNA MER1_type 133 129 -168 243 108 0 0 chr5 1111808 1111845 -198518305 + MER1B DNA MER1_type 133 129 -168 * 248 105 0 0 chr5 1111871 1111909 -198518241 + MER1B DNA MER1_type 132 129 -168 225 132 0 0 chr5 1111967 1112005 -198518145 + MER1B DNA MER1_type 132 129 -168 243 108 0 0 chr5 1112257 1112294 -198517856 + MER1B DNA MER1_type 133 129 -168 243 108 0 0 chr5 1112577 1112614 -198517536 + MER1B DNA MER1_type 133 129 -168 243 108 0 0 chr5 1112737 1112774 -198517376 + MER1B DNA MER1_type 133 129 -168 226 65 0 0 chr5 1112801 1112832 -198517318 + MER1B DNA MER1_type 133 123 -174 1564 120 9 19 chr5 1112852 1113113 -198517037 + MER1B DNA MER1_type 119 337 -2 630 88 0 0 chr5 1113237 1113317 -198516833 + MADE1 DNA Mariner 1 80 0 1976 159 0 0 chr5 1113383 1113679 -198516471 - AluJb SINE Alu -8 304 9 460 255 73 14 chr5 1113816 1114021 -198516129 + L1MD2 LINE L1 5802 6029 -137 789 245 82 90 chr5 1114077 1114501 -198515649 + L1MC5 LINE L1 5412 5832 -1976 2310 98 7 0 chr5 1115373 1115668 -198514482 + AluSq SINE Alu 1 297 -16 381 284 56 10 chr5 1115870 1116067 -198514083 + L1MC5 LINE L1 6960 7165 -796 1633 91 14 5 chr5 1116071 1116281 -198513869 + AluSq SINE Alu 85 296 -17 232 167 88 114 chr5 1116308 1116422 -198513728 - MER5A DNA MER1_type -2 187 77 184 239 250 11 chr5 1116488 1116576 -198513574 + MER5A DNA MER1_type 77 185 -4 325 261 34 0 chr5 1117402 1117490 -198512660 - MER3 DNA MER1_type -118 91 1 258 204 20 0 chr5 1117941 1117990 -198512160 - L2 LINE L2 0 3313 3264 2292 73 59 0 chr5 1118625 1118913 -198511237 - AluY SINE Alu -6 305 1 369 255 206 6 chr5 1118993 1119149 -198511001 + MIR SINE MIR 17 206 -56 637 170 0 0 chr5 1119426 1119520 -198510630 - AluJ/FLAM SINE Alu -217 95 2 2842 123 102 21 chr5 1119756 1120286 -198509864 - MER4B LTR ERV1 -37 573 1 581 332 124 21 chr5 1120371 1120853 -198509297 + L3 LINE CR1 403 934 -643 2164 89 3 7 chr5 1121156 1121460 -198508690 - AluSp SINE Alu -10 303 1 1338 146 56 0 chr5 1121463 1121731 -198508419 - AluJb SINE Alu 0 312 30 332 257 0 46 chr5 1122168 1122343 -198507807 + C-rich Low_complexity Low_complexity 2 168 0 195 310 46 35 chr5 1124788 1124875 -198505275 + MIR SINE MIR 171 258 -4 734 143 0 0 chr5 1125460 1125572 -198504578 + FLAM_C SINE Alu 2 113 -30 1195 157 44 0 chr5 1126360 1126564 -198503586 + AluJb SINE Alu 85 297 -15 557 132 0 0 chr5 1126803 1126879 -198503271 - FLAM_A SINE Alu -24 118 43 2002 110 0 14 chr5 1127446 1127615 -198502535 - AluY SINE Alu -11 300 135 2357 75 13 0 chr5 1127615 1127921 -198502229 - AluY SINE Alu 0 311 2 2002 110 0 14 chr5 1127921 1128043 -198502107 - AluY SINE Alu -176 135 13 1527 97 14 0 chr5 1128046 1128263 -198501887 + AluSg/x SINE Alu 90 309 -1 495 284 45 35 chr5 1128547 1128748 -198501402 - L2 LINE L2 0 3313 3111 1820 160 3 13 chr5 1128749 1129056 -198501094 + AluJb SINE Alu 1 304 -8 210 265 0 73 chr5 1129210 1129346 -198500804 + G-rich Low_complexity Low_complexity 6 131 0 207 0 0 0 chr5 1130228 1130251 -198499899 + (A)n Simple_repeat Simple_repeat 1 23 0 298 130 93 0 chr5 1130265 1130319 -198499831 - MADE1 DNA Mariner -21 59 1 235 366 35 25 chr5 1130414 1130616 -198499534 - L2 LINE L2 -199 3073 2870 313 260 38 10 chr5 1130632 1130813 -198499337 - L2 LINE L2 -285 2987 2793 231 128 26 0 chr5 1132855 1132894 -198497256 - MLT2C1 LTR ERVL -128 269 230 229 161 54 18 chr5 1135775 1135831 -198494319 - MLT2D LTR ERVL -128 286 229 311 65 22 0 chr5 1137620 1137666 -198492484 + (TA)n Simple_repeat Simple_repeat 1 47 0 189 0 0 0 chr5 1137942 1137963 -198492187 + (GAAA)n Simple_repeat Simple_repeat 2 22 0 256 322 45 28 chr5 1140027 1140204 -198489946 - L2 LINE L2 -433 2881 2702 1373 302 50 22 chr5 1141225 1142211 -198487939 + L1ME1 LINE L1 4976 5994 -172 2865 171 36 2 chr5 1142924 1143402 -198486748 - LOR1a LTR ERV1 0 497 4 743 253 45 5 chr5 1144671 1144869 -198485281 - L1MA10 LINE L1 -10 6324 6119 2291 84 0 0 chr5 1146486 1146783 -198483367 - AluY SINE Alu -14 297 1 23 0 0 0 chr5 1146785 1146808 -198483342 + AT_rich Low_complexity Low_complexity 1 23 0 506 246 92 38 chr5 1146994 1147344 -198482806 + MER77 LTR ERV1 1 451 -154 599 236 66 46 chr5 1149851 1150092 -198480058 + MER33 DNA MER1_type 33 278 -46 212 241 0 60 chr5 1152649 1152732 -198477418 + C-rich Low_complexity Low_complexity 6 83 0 306 255 0 21 chr5 1152973 1153067 -198477083 + C-rich Low_complexity Low_complexity 2 93 0 459 94 118 47 chr5 1153769 1153854 -198476296 + AluJo SINE Alu 85 175 -137 1938 107 4 0 chr5 1155521 1155791 -198474359 + AluSx SINE Alu 1 271 -41 326 203 0 16 chr5 1155902 1155966 -198474184 + L2 LINE L2 3251 3313 0 405 247 62 0 chr5 1155984 1156081 -198474069 + Zaphod DNA AcHobo 500 602 -3429 200 264 190 33 chr5 1157139 1157260 -198472890 + L2 LINE L2 3128 3267 -46 635 163 0 36 chr5 1157947 1158113 -198472037 + (CCCTAA)n Simple_repeat Simple_repeat 6 165 0 388 143 0 33 chr5 1158124 1158215 -198471935 + (CCCTAA)n Simple_repeat Simple_repeat 6 93 0 207 0 0 0 chr5 1158403 1158426 -198471724 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 2854 125 7 13 chr5 1158426 1158875 -198471275 - L1PB1 LINE L1 -11 6140 5695 1608 152 0 0 chr5 1159872 1160122 -198470028 - AluSx SINE Alu -62 250 1 2070 120 3 3 chr5 1160491 1160792 -198469358 - AluSg SINE Alu -9 301 1 32 26 0 0 chr5 1160801 1160840 -198469310 + AT_rich Low_complexity Low_complexity 1 39 0 2207 104 0 0 chr5 1162637 1162944 -198467206 - AluSg SINE Alu -3 307 1 213 250 59 0 chr5 1165400 1165468 -198464682 + MIR3 SINE MIR 116 187 -21 213 246 31 0 chr5 1165951 1166016 -198464134 + (TG)n Simple_repeat Simple_repeat 1 67 0 216 277 0 15 chr5 1166142 1166207 -198463943 + T-rich Low_complexity Low_complexity 2 65 0 269 262 8 41 chr5 1166607 1166729 -198463421 + (CGGGG)n Simple_repeat Simple_repeat 1 118 0 294 294 198 6 chr5 1168776 1168953 -198461197 - MLT1J2 LTR MaLR -51 399 189 486 337 118 3 chr5 1170446 1170802 -198459348 + HAL1 LINE L1 255 651 -1856 1386 207 97 19 chr5 1170909 1171401 -198458749 + MER74A LTR ERVL 1 558 0 326 221 18 71 chr5 1171548 1171661 -198458489 - L1MC5 LINE L1 -402 7559 7453 1491 195 94 6 chr5 1171694 1172199 -198457951 + L1MB7 LINE L1 5459 6164 -20 1035 285 121 11 chr5 1172208 1172653 -198457497 + HAL1 LINE L1 1295 1788 -719 5666 135 6 26 chr5 1174172 1174672 -198455478 + L1PA14 LINE L1 4877 5385 -776 2259 123 0 0 chr5 1174672 1174980 -198455170 + AluY SINE Alu 1 308 -3 5666 135 6 26 chr5 1174980 1175200 -198454950 + L1PA14 LINE L1 5385 5608 -553 8595 52 20 1 chr5 1175200 1176249 -198453901 - MER11C LTR ERVK -2 1069 1 5666 135 6 26 chr5 1176249 1176808 -198453342 + L1PA14 LINE L1 5608 6133 -28 913 204 23 27 chr5 1176910 1177130 -198453020 + L1MC3 LINE L1 7077 7295 -490 1358 159 92 78 chr5 1177139 1177510 -198452640 + L1MC3 LINE L1 7403 7778 -7 637 131 0 10 chr5 1178386 1178485 -198451665 + MER4A LTR ERV1 1 98 -566 1759 147 9 13 chr5 1178485 1178832 -198451318 + MER4A LTR ERV1 261 664 0 35 41 0 0 chr5 1179334 1179383 -198450767 + AT_rich Low_complexity Low_complexity 1 49 0 9571 42 0 2 chr5 1182158 1184105 -198446045 + L1PA5 LINE L1 4207 6154 0 247 269 65 21 chr5 1184959 1185052 -198445098 - HAL1 LINE L1 -1605 902 806 609 124 0 0 chr5 1187762 1187859 -198442291 + (TG)n Simple_repeat Simple_repeat 2 98 0 26 30 0 0 chr5 1188646 1188679 -198441471 + AT_rich Low_complexity Low_complexity 1 33 0 706 250 41 37 chr5 1189553 1189797 -198440353 - L1MC2 LINE L1 -181 6163 5919 1963 181 91 3 chr5 1189849 1190555 -198439595 - L1MC/D LINE L1 -750 5396 4791 2328 87 3 3 chr5 1192407 1192707 -198437443 - AluSp SINE Alu -13 300 1 6929 61 13 14 chr5 1193189 1194482 -198435668 - L1PA7 LINE L1 -2 6152 4854 299 265 10 0 chr5 1194594 1194692 -198435458 + L1ME1 LINE L1 6060 6158 -8 356 297 42 36 chr5 1195165 1195330 -198434820 - MLT1K LTR MaLR -24 564 399 3949 170 40 77 chr5 1196027 1196685 -198433465 - L1MA7 LINE L1 -5 6286 5610 346 109 0 47 chr5 1196685 1196749 -198433401 - Alu SINE Alu -2 300 240 3949 170 40 77 chr5 1196749 1197010 -198433140 - L1MA7 LINE L1 -681 5610 5341 2050 227 13 13 chr5 1197009 1197459 -198432691 + L1 LINE L1 3805 4254 -1892 * 2836 86 0 3 chr5 1197459 1197821 -198432329 - THE1C LTR MaLR 0 375 15 10390 101 70 3 chr5 1197821 1199302 -198430848 - THE1C-int LTR MaLR 0 1580 1 1777 63 5 5 chr5 1199302 1199525 -198430625 - THE1C LTR MaLR 0 375 153 367 132 0 0 chr5 1199527 1199580 -198430570 + Alu SINE Alu 1 53 -247 1041 79 0 0 chr5 1199582 1199733 -198430417 + AluSg/x SINE Alu 159 309 0 1160 102 25 0 chr5 1199733 1199890 -198430260 - THE1C LTR MaLR -214 161 1 3541 176 40 22 chr5 1199891 1200660 -198429490 + L1 LINE L1 4251 5033 -1113 643 76 0 0 chr5 1200660 1200739 -198429411 + MER30B DNA MER1_type 2 80 -110 874 132 0 0 chr5 1200739 1200853 -198429297 + AluSg SINE Alu 1 114 -196 41171 69 10 8 chr5 1200861 1206994 -198423156 + L1PA6 LINE L1 8 6147 -7 1421 104 5 0 chr5 1206994 1207186 -198422964 + AluSg SINE Alu 105 297 -15 396 0 0 0 chr5 1207187 1207231 -198422919 + (CA)n Simple_repeat Simple_repeat 2 45 0 884 119 60 8 chr5 1207233 1207367 -198422783 + MER30B DNA MER1_type 90 230 0 1119 210 27 57 chr5 1207367 1207700 -198422450 + L1 LINE L1 5027 5349 -797 214 222 14 14 chr5 1207841 1207913 -198422237 + (TA)n Simple_repeat Simple_repeat 2 73 0 728 205 0 0 chr5 1208957 1209084 -198421066 - MSTC LTR MaLR -80 348 222 261 394 8 0 chr5 1209983 1210110 -198420040 - L2 LINE L2 -1 3271 3144 411 304 119 5 chr5 1210508 1210709 -198419441 - L1M4b LINE L1 -6625 234 11 228 170 0 0 chr5 1414323 1414376 -198215774 + (CA)n Simple_repeat Simple_repeat 2 54 0 204 40 0 0 chr5 1414449 1414474 -198215676 + (CA)n Simple_repeat Simple_repeat 2 26 0 291 260 30 20 chr5 1415025 1415125 -198215025 + GA-rich Low_complexity Low_complexity 1 101 0 198 240 40 0 chr5 1417244 1417294 -198212856 - MER5A DNA MER1_type -91 98 47 233 204 20 0 chr5 1419789 1419838 -198210312 + Tigger3(Golem) DNA MER2_type 1 50 -2979 686 173 23 30 chr5 1429926 1430059 -198200091 + FLAM_C SINE Alu 1 132 -1 844 231 163 10 chr5 1430285 1430579 -198199571 + MER44D DNA MER2_type 1 609 0 2012 126 0 7 chr5 1432331 1432658 -198197492 + AluSx SINE Alu 1 312 0 1980 103 59 10 chr5 1438637 1438927 -198191223 - AluSx SINE Alu -8 304 1 279 0 0 0 chr5 1439870 1439901 -198190249 + (TG)n Simple_repeat Simple_repeat 1 31 0 1761 149 14 10 chr5 1440463 1440752 -198189398 - AluJb SINE Alu -22 290 1 2182 95 3 0 chr5 1440774 1441068 -198189082 + AluSg SINE Alu 1 295 -15 24 0 0 0 chr5 1442511 1442535 -198187615 + GC_rich Low_complexity Low_complexity 1 24 0 43 64 0 0 chr5 1442705 1442783 -198187367 + GC_rich Low_complexity Low_complexity 1 78 0 22 56 0 0 chr5 1442914 1442950 -198187200 + GC_rich Low_complexity Low_complexity 1 36 0 2388 58 0 0 chr5 1445839 1446130 -198184020 - AluY SINE Alu -19 292 2 3676 140 28 25 chr5 1446939 1447429 -198182721 - MER50 LTR ERV1 -23 711 217 1660 54 45 18 chr5 1447429 1447651 -198182499 - L1PA6 LINE L1 -5 6149 5922 3676 140 28 25 chr5 1447651 1447846 -198182304 - MER50 LTR ERV1 -517 217 24 2528 157 52 7 chr5 1447995 1448421 -198181729 + MER65A LTR ERV1 1 445 0 484 272 51 24 chr5 1448595 1448729 -198181421 - L1ME1 LINE L1 0 6166 6037 1892 145 10 3 chr5 1448729 1449025 -198181125 + AluJb SINE Alu 1 298 -14 484 272 51 24 chr5 1449025 1449326 -198180824 - L1ME1 LINE L1 -129 6037 5685 1671 140 52 4 chr5 1449330 1449601 -198180549 - AluJo SINE Alu -20 292 9 3174 150 8 0 chr5 1449601 1450209 -198179941 - L1 LINE L1 -1226 5562 4950 * 3189 209 129 3 chr5 1450207 1451067 -198179083 - L1 LINE L1 -5821 968 1 731 253 111 75 chr5 1451148 1451407 -198178743 - L1MEc LINE L1 -3654 2561 2313 2060 116 3 3 chr5 1451407 1451699 -198178451 - AluSq SINE Alu -21 292 1 1905 150 0 26 chr5 1451701 1452008 -198178142 - AluJb SINE Alu -13 299 1 731 253 111 75 chr5 1452008 1453076 -198177074 - L1MEc LINE L1 -3902 2313 1008 686 331 48 3 chr5 1453118 1453432 -198176718 - L1ME1 LINE L1 -2079 6371 6044 2224 106 0 6 chr5 1453446 1453757 -198176393 + AluSq SINE Alu 1 309 -4 3069 164 72 2 chr5 1454380 1454897 -198175253 - MER41C LTR ERV1 0 554 2 1362 184 46 20 chr5 1454898 1455246 -198174904 - MLT1B LTR MaLR -33 357 1 258 322 66 8 chr5 1456252 1456373 -198173777 - MIR SINE MIR -29 233 106 380 258 20 0 chr5 1457093 1457204 -198172946 + MER45B DNA AcHobo 67 177 -863 345 299 46 37 chr5 1457383 1457600 -198172550 + MER45B DNA AcHobo 575 793 -247 659 179 132 24 chr5 1458043 1458171 -198171979 + MER45B DNA AcHobo 785 898 -683 2076 113 14 0 chr5 1458171 1458463 -198171687 + AluSx SINE Alu 1 296 -16 659 179 132 24 chr5 1458463 1458546 -198171604 + MER45B DNA AcHobo 898 1019 -21 213 189 33 67 chr5 1459248 1459338 -198170812 + (CTGGGG)n Simple_repeat Simple_repeat 2 88 0 1969 120 0 4 chr5 1459406 1459682 -198170468 + AluSx SINE Alu 14 288 -24 1475 272 52 82 chr5 1459685 1460450 -198169700 + MER21B LTR ERV1 15 756 -107 2157 101 0 7 chr5 1460747 1461045 -198169105 + AluSx SINE Alu 1 296 -16 239 326 28 21 chr5 1461405 1461546 -198168604 + MER20B DNA MER1_type 257 398 -385 233 301 39 19 chr5 1461705 1461808 -198168342 + MER20B DNA MER1_type 679 783 0 862 129 8 8 chr5 1462659 1462791 -198167359 + AluSg SINE Alu 1 132 -178 2190 112 10 0 chr5 1462791 1463095 -198167055 + AluSg SINE Alu 1 307 -3 1813 118 0 0 chr5 1463298 1463552 -198166598 + AluSx SINE Alu 1 254 -58 339 85 0 0 chr5 1463566 1463613 -198166537 + (TG)n Simple_repeat Simple_repeat 2 48 0 514 309 40 0 chr5 1463616 1463791 -198166359 + L1MC1 LINE L1 4593 4774 -1372 245 270 45 11 chr5 1463809 1463898 -198166252 + (TGGG)n Simple_repeat Simple_repeat 4 95 0 5037 209 33 12 chr5 1463898 1465399 -198164751 + L1MC1 LINE L1 4802 6332 -1 2326 90 3 3 chr5 1465410 1465722 -198164428 + AluSp SINE Alu 1 312 -1 385 348 139 16 chr5 1465872 1466418 -198163732 + L1MC4a LINE L1 5269 5881 -1927 1306 174 92 90 chr5 1466566 1466945 -198163205 + MER66A LTR ERV1 99 478 0 4541 224 81 32 chr5 1467065 1468358 -198161792 + MER66A-int LTR ERV1 53 1408 -5268 2056 199 59 5 chr5 1468805 1469478 -198160672 + MER66A-int LTR ERV1 1424 2168 -4508 * 4315 235 53 20 chr5 1469467 1470050 -198160100 + MER66A-int LTR ERV1 2336 2898 -3778 1569 110 9 9 chr5 1470050 1470278 -198159872 - AluSc SINE Alu -17 292 65 4315 235 53 20 chr5 1470278 1471026 -198159124 + MER66A-int LTR ERV1 2898 3813 -2863 1336 74 0 0 chr5 1471053 1471216 -198158934 - AluSq SINE Alu -150 163 1 945 258 70 36 chr5 1471216 1471407 -198158743 + MER66A-int LTR ERV1 3827 4035 -2641 2227 100 0 3 chr5 1471407 1471707 -198158443 - AluSg SINE Alu -11 299 1 945 258 70 36 chr5 1471707 1471845 -198158305 + MER66A-int LTR ERV1 4035 4167 -2509 1709 135 0 105 chr5 1471848 1472181 -198157969 + AluJb SINE Alu 1 298 -4 610 189 0 24 chr5 1472219 1472346 -198157804 + MER66A-int LTR ERV1 4701 4824 -1852 281 231 15 0 chr5 1472421 1472486 -198157664 + MER66A-int LTR ERV1 6324 6389 -287 525 156 7 3 chr5 1472569 1472711 -198157439 - MER66A LTR ERV1 0 478 298 1425 192 91 0 chr5 1472762 1473070 -198157080 + MER66A-int LTR ERV1 6339 6674 -2 1093 213 144 56 chr5 1473172 1473572 -198156578 + MER66A LTR ERV1 97 478 0 669 265 55 0 chr5 1473967 1474186 -198155964 - MLT1C LTR MaLR -184 283 53 1772 109 66 0 chr5 1474305 1474562 -198155588 - AluSx SINE Alu -38 274 1 626 259 40 71 chr5 1474663 1474960 -198155190 - L1MC4a LINE L1 -3 7805 7518 1317 265 98 55 chr5 1474994 1475431 -198154719 - L1MC4a LINE L1 -387 7421 6935 1712 178 7 7 chr5 1475431 1475724 -198154426 - AluJb SINE Alu -19 293 1 1317 265 98 55 chr5 1475724 1476052 -198154098 - L1MC4a LINE L1 -873 6935 6623 626 193 114 0 chr5 1476237 1476377 -198153773 + MER45A DNA AcHobo 22 177 -1 674 231 89 41 chr5 1476378 1476697 -198153453 - L1MC4a LINE L1 -1332 6476 6113 3732 158 67 42 chr5 1477539 1478210 -198151940 - LTR12 LTR ERV1 0 688 1 632 202 97 45 chr5 1478304 1478551 -198151599 - pTR5 LTR ERV1 -1441 997 738 1393 226 29 9 chr5 1478579 1478929 -198151221 + MLT1A1 LTR MaLR 3 359 -6 446 316 0 7 chr5 1479270 1479422 -198150728 + (CA)n Simple_repeat Simple_repeat 1 151 0 415 300 9 3 chr5 1479456 1479791 -198150359 + (CA)n Simple_repeat Simple_repeat 1 337 0 1828 88 149 0 chr5 1480570 1480831 -198149319 + AluSx SINE Alu 1 300 -2 1166 134 32 0 chr5 1480835 1481021 -198149129 + AluSg/x SINE Alu 118 309 -1 371 291 125 35 chr5 1481296 1481640 -198148510 - MLT1E LTR MaLR -114 479 105 389 285 137 23 chr5 1482389 1482580 -198147570 - MIR SINE MIR -47 215 11 247 224 17 0 chr5 1484809 1484867 -198145283 - MER81 DNA DNA -54 60 2 902 164 0 11 chr5 1486141 1486416 -198143734 + (TCCA)n Simple_repeat Simple_repeat 1 272 0 189 0 0 0 chr5 1486428 1486449 -198143701 + (TCCA)n Simple_repeat Simple_repeat 4 24 0 572 198 12 17 chr5 1486488 1486660 -198143490 + (TCCA)n Simple_repeat Simple_repeat 1 171 0 215 263 0 0 chr5 1486668 1486725 -198143425 + (CCCA)n Simple_repeat Simple_repeat 3 59 0 * 226 271 0 0 chr5 1486698 1486746 -198143404 + polypyrimidine Low_complexity Low_complexity 4 51 0 344 246 8 0 chr5 1486749 1486871 -198143279 + (TCCA)n Simple_repeat Simple_repeat 2 124 0 296 231 10 0 chr5 1486907 1487011 -198143139 + (TCCA)n Simple_repeat Simple_repeat 2 106 0 248 235 59 69 chr5 1487011 1487113 -198143037 - L2 LINE L2 0 3272 3172 1030 218 64 123 chr5 1487470 1487924 -198142226 - MLT1C LTR MaLR -33 434 8 261 304 130 5 chr5 1488100 1488284 -198141866 - LTR16A1 LTR ERVL -3 454 248 476 286 20 6 chr5 1488642 1488842 -198141308 - L1M3 LINE L1 -722 5458 5254 253 323 161 29 chr5 1489865 1490249 -198139901 - L2 LINE L2 -518 2796 2362 383 299 134 5 chr5 1493694 1493888 -198136262 + L1MEd LINE L1 597 815 -5304 1168 297 87 14 chr5 1494127 1494690 -198135460 + L1MEc LINE L1 256 859 -5748 1183 58 41 35 chr5 1495129 1495330 -198134820 + AluY SINE Alu 119 311 0 237 342 46 20 chr5 1495489 1495641 -198134509 + L1MEc LINE L1 1699 1854 -4572 1362 307 91 21 chr5 1495884 1495941 -198134209 + L1MEc LINE L1 2244 2296 -4130 2184 118 0 0 chr5 1495941 1496245 -198133905 + AluSx SINE Alu 3 306 -6 1362 307 91 21 chr5 1496245 1497416 -198132734 + L1MEc LINE L1 2296 3507 -2919 286 295 155 0 chr5 1498078 1498207 -198131943 + MIR SINE MIR 65 213 -49 686 173 23 30 chr5 1503858 1503991 -198126159 + FLAM_C SINE Alu 1 132 -1 844 231 163 10 chr5 1504217 1504511 -198125639 + MER44D DNA MER2_type 1 609 0 252 59 0 0 chr5 1505244 1505278 -198124872 + (CATCC)n Simple_repeat Simple_repeat 2 35 0 241 296 31 0 chr5 1507301 1507399 -198122751 - MER58A DNA MER1_type 0 119 19 995 206 43 16 chr5 1508347 1508604 -198121546 - L1MB3 LINE L1 -8 6175 5912 1590 106 9 127 chr5 1509650 1509989 -198120161 - AluSp SINE Alu -12 301 3 237 297 89 10 chr5 1510072 1510173 -198119977 - MIR SINE MIR -59 149 41 769 185 11 0 chr5 1512444 1512622 -198117528 + (TG)n Simple_repeat Simple_repeat 1 180 0 362 252 34 3 chr5 1513400 1513709 -198116441 + (CA)n Simple_repeat Simple_repeat 1 318 0 225 254 103 40 chr5 1513753 1513977 -198116173 + MLT1I LTR MaLR 29 266 -143 277 219 65 24 chr5 1516041 1516164 -198113986 + (CGGGG)n Simple_repeat Simple_repeat 1 128 0 315 287 6 47 chr5 1516483 1516711 -198113439 + CT-rich Low_complexity Low_complexity 1 218 0 267 107 76 23 chr5 1520658 1520789 -198109361 + (TCTA)n Simple_repeat Simple_repeat 4 141 0 893 97 34 6 chr5 1520813 1520873 -198109277 + (TCCA)n Simple_repeat Simple_repeat 1 241 0 893 97 34 6 chr5 1520873 1521048 -198109102 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 697 128 41 6 chr5 1521074 1521246 -198108904 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 723 105 41 12 chr5 1521287 1521458 -198108692 + (TCCA)n Simple_repeat Simple_repeat 4 179 0 726 140 17 17 chr5 1521479 1521657 -198108493 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 1953 99 4 0 chr5 1523466 1523729 -198106421 - AluSq SINE Alu -14 299 36 379 309 15 5 chr5 1527593 1527794 -198102356 + L1MEc LINE L1 675 877 -5519 3887 167 70 14 chr5 1527794 1528545 -198101605 + L1MB3 LINE L1 4962 5808 -375 1790 174 3 22 chr5 1528545 1528862 -198101288 + AluJb SINE Alu 1 311 -1 3887 167 70 14 chr5 1528862 1529252 -198100898 + L1MB3 LINE L1 5808 6175 -8 2883 235 72 9 chr5 1529263 1530662 -198099488 + L1MEc LINE L1 1634 3085 -3130 280 311 27 12 chr5 1533685 1534028 -198096122 + (GGCTG)n Simple_repeat Simple_repeat 1 348 0 374 103 103 81 chr5 1535759 1535933 -198094217 + (TCCA)n Simple_repeat Simple_repeat 2 179 0 193 81 141 20 chr5 1536044 1536143 -198094007 + (TCCA)n Simple_repeat Simple_repeat 4 114 0 205 143 53 127 chr5 1536172 1536361 -198093789 + (TCCA)n Simple_repeat Simple_repeat 4 178 0 181 281 62 0 chr5 1538222 1538286 -198091864 - L3 LINE CR1 -425 1152 1085 2112 85 3 10 chr5 1539260 1539555 -198090595 + AluSc SINE Alu 1 293 -16 180 0 0 0 chr5 1539562 1539582 -198090568 + (GAAAA)n Simple_repeat Simple_repeat 5 24 0 301 220 33 0 chr5 1539654 1539804 -198090346 + GA-rich Low_complexity Low_complexity 1 155 0 243 0 0 0 chr5 1541616 1541643 -198088507 + (TGGGGG)n Simple_repeat Simple_repeat 3 29 0 238 365 82 10 chr5 1542135 1542343 -198087807 + MIR SINE MIR 24 246 -16 850 186 10 0 chr5 1542428 1542722 -198087428 + (TGGA)n Simple_repeat Simple_repeat 1 297 0 215 246 36 0 chr5 1542704 1542814 -198087336 + (TAGA)n Simple_repeat Simple_repeat 3 116 0 * 1560 171 15 73 chr5 1542823 1543221 -198086929 + MLT1B LTR MaLR 16 390 0 274 200 40 13 chr5 1543234 1543384 -198086766 + (TAGA)n Simple_repeat Simple_repeat 3 156 0 273 333 19 0 chr5 1544480 1544585 -198085565 + MIR SINE MIR 79 185 -77 1541 154 18 91 chr5 1545963 1546294 -198083856 - AluJo SINE Alu -3 309 3 504 188 0 0 chr5 1546647 1546775 -198083375 + (CA)n Simple_repeat Simple_repeat 1 128 0 26 0 0 0 chr5 1547846 1547872 -198082278 + GC_rich Low_complexity Low_complexity 1 26 0 241 267 0 0 chr5 1548843 1548918 -198081232 + C-rich Low_complexity Low_complexity 1 75 0 641 238 105 28 chr5 1549006 1549292 -198080858 - MLT1A1 LTR MaLR -15 350 43 1491 170 65 0 chr5 1549559 1549835 -198080315 + AluJb SINE Alu 1 294 -18 1155 325 34 26 chr5 1550991 1551551 -198078599 + ERVL LTR ERVL 2615 3182 -2582 803 235 10 56 chr5 1551551 1551747 -198078403 - MER5A DNA MER1_type -2 187 1 1155 325 34 26 chr5 1551747 1551799 -198078351 + ERVL LTR ERVL 3182 3232 -2532 759 320 123 6 chr5 1551839 1552408 -198077742 + ERVL LTR ERVL 3267 3953 -1741 1521 256 72 4 chr5 1552410 1552894 -198077256 + L1M4 LINE L1 4201 4717 -1429 1917 235 97 27 chr5 1553134 1553156 -198076994 - L1ME1 LINE L1 -180 6055 6036 2082 110 0 0 chr5 1553156 1553437 -198076713 - AluSx SINE Alu -4 308 28 1917 235 97 27 chr5 1553437 1554551 -198075599 - L1ME1 LINE L1 -199 6036 4828 1499 192 58 36 chr5 1554551 1554915 -198075235 + MLT1A2 LTR MaLR 1 372 -2 1917 235 97 27 chr5 1554915 1555069 -198075081 - L1ME1 LINE L1 -1407 4828 4686 1604 240 63 40 chr5 1555082 1555760 -198074390 - L1ME1 LINE L1 -3068 3147 2454 1419 268 70 25 chr5 1555767 1556425 -198073725 - L1ME1 LINE L1 -4995 1234 577 261 224 0 0 chr5 1556437 1556486 -198073664 - L1ME1 LINE L1 -6311 85 37 2088 147 0 0 chr5 1556501 1556807 -198073343 - AluSx SINE Alu -6 306 1 373 259 98 0 chr5 1557006 1557118 -198073032 - L1MEc LINE L1 -3334 3092 2970 666 246 121 25 chr5 1557127 1557468 -198072682 - L1MEc LINE L1 -3513 2913 2606 2116 134 0 6 chr5 1557468 1557781 -198072369 - AluSx SINE Alu -1 311 1 666 246 121 25 chr5 1557781 1558062 -198072088 - L1MEc LINE L1 -3820 2606 2260 1744 161 25 3 chr5 1558062 1558347 -198071803 - AluSx SINE Alu -21 291 1 666 246 121 25 chr5 1558347 1558388 -198071762 - L1MEc LINE L1 -4166 2260 2224 494 306 139 28 chr5 1558388 1558711 -198071439 - L1MEc LINE L1 -4555 1967 1513 270 182 0 0 chr5 1558716 1558771 -198071379 - L1MEc LINE L1 -4859 1567 1513 270 182 0 0 chr5 1558776 1558831 -198071319 - L1MEc LINE L1 -4859 1567 1513 270 182 0 0 chr5 1558836 1558891 -198071259 - L1MEc LINE L1 -4859 1567 1513 270 182 0 0 chr5 1558896 1558951 -198071199 - L1MEc LINE L1 -4859 1567 1513 624 294 102 9 chr5 1558956 1559395 -198070755 - L1MEc LINE L1 -4851 1545 1066 782 311 58 18 chr5 1559405 1559785 -198070365 + ERVL LTR ERVL 4099 4493 -1271 267 396 43 13 chr5 1559863 1560093 -198070057 + ERVL LTR ERVL 4592 4828 -936 332 358 47 4 chr5 1560165 1560397 -198069753 + MLT1I LTR MaLR 61 302 -107 541 317 12 32 chr5 1560785 1561034 -198069116 + ERVL LTR ERVL 5191 5434 -330 332 391 0 0 chr5 1561035 1561209 -198068941 + (TG)n Simple_repeat Simple_repeat 2 175 0 287 280 34 46 chr5 1561137 1561312 -198068838 + (CATG)n Simple_repeat Simple_repeat 1 173 0 * 313 302 0 62 chr5 1561362 1561554 -198068596 + (CATG)n Simple_repeat Simple_repeat 1 180 0 219 401 0 6 chr5 1561528 1561700 -198068450 + (TG)n Simple_repeat Simple_repeat 2 172 0 * 272 392 0 0 chr5 1561775 1561928 -198068222 + (TG)n Simple_repeat Simple_repeat 2 154 0 375 359 0 6 chr5 1561955 1562136 -198068014 + (TG)n Simple_repeat Simple_repeat 1 180 0 491 260 13 29 chr5 1566892 1567903 -198062247 + (CA)n Simple_repeat Simple_repeat 1 995 0 304 364 6 11 chr5 1568048 1568224 -198061926 + (CA)n Simple_repeat Simple_repeat 1 175 0 2150 111 0 13 chr5 1571806 1572113 -198058037 + AluSx SINE Alu 5 307 -5 801 223 128 0 chr5 1577118 1577360 -198052790 - Tigger1 DNA MER2_type -2031 387 115 460 191 107 30 chr5 1577360 1577491 -198052659 - Tigger1 DNA MER2_type -2256 162 22 217 269 0 13 chr5 1579130 1579208 -198050942 + GA-rich Low_complexity Low_complexity 3 79 0 1586 147 73 18 chr5 1581469 1581755 -198048395 + AluJo SINE Alu 1 302 -10 235 229 16 0 chr5 1584752 1584813 -198045337 + (CTGGGG)n Simple_repeat Simple_repeat 2 63 0 666 184 11 10 chr5 1584816 1585110 -198045040 + (GGGTG)n Simple_repeat Simple_repeat 1 294 0 389 281 178 43 chr5 1592597 1592995 -198037155 + MLT1C LTR MaLR 4 455 -12 788 269 82 31 chr5 1593306 1593851 -198036299 + Looper DNA T2_type 29 641 -917 775 263 191 3 chr5 1594024 1594344 -198035806 + Looper DNA T2_type 873 1252 -306 323 304 40 8 chr5 1594823 1594948 -198035202 + Looper DNA T2_type 1350 1478 -80 445 171 170 24 chr5 1596131 1596285 -198033865 + MLT1D LTR MaLR 22 175 -215 2258 114 0 0 chr5 1598432 1598740 -198031410 + AluSx SINE Alu 1 308 -4 262 309 49 8 chr5 1599500 1599623 -198030527 + HAL1 LINE L1 1016 1143 -1364 206 214 0 0 chr5 1600820 1600862 -198029288 + (CA)n Simple_repeat Simple_repeat 1 42 0 278 258 12 24 chr5 1600869 1601036 -198029114 + (CATA)n Simple_repeat Simple_repeat 1 165 0 208 258 11 11 chr5 1601080 1601173 -198028977 + (CA)n Simple_repeat Simple_repeat 1 93 0 326 353 0 8 chr5 1601187 1601320 -198028830 + (CA)n Simple_repeat Simple_repeat 1 132 0 440 293 47 0 chr5 1602341 1602491 -198027659 - MER58A DNA MER1_type -28 196 40 336 258 53 13 chr5 1602963 1603114 -198027036 - Charlie8 DNA MER1_type -2185 232 76 213 358 0 0 chr5 1604107 1604283 -198025867 + (ACCTG)n Simple_repeat Simple_repeat 3 178 0 335 240 69 8 chr5 1605200 1605415 -198024735 - Charlie5 DNA MER1_type 0 2624 2341 231 365 0 10 chr5 1605734 1605838 -198024312 - L1M4 LINE L1 -2191 3955 3853 273 348 73 0 chr5 1606390 1606568 -198023582 - L1M4 LINE L1 -2992 3154 2964 2237 84 10 0 chr5 1606792 1607090 -198023060 + AluSp SINE Alu 1 301 -12 278 311 38 0 chr5 1609835 1609967 -198020183 + L1MC5 LINE L1 6695 6831 -1130 657 238 74 0 chr5 1610339 1610528 -198019622 + MLT1A1 LTR MaLR 147 349 -16 1604 180 38 11 chr5 1610641 1611022 -198019128 + MLT1B LTR MaLR 1 396 0 213 282 59 24 chr5 1615169 1615254 -198014896 - L2 LINE L2 -2 3270 3183 617 206 0 0 chr5 1666388 1666514 -197963636 - MLT2B1 LTR ERVL -394 126 1 1434 80 0 0 chr5 1666647 1666823 -197963327 - AluSc SINE Alu 0 309 134 281 277 76 25 chr5 1667218 1667337 -197962813 + MIR SINE MIR 88 212 -50 1508 161 103 4 chr5 1667470 1667743 -197962407 + AluJb SINE Alu 1 300 -12 2337 89 7 0 chr5 1668743 1669060 -197961090 - AluSc SINE Alu 0 319 1 670 210 36 6 chr5 1669411 1669578 -197960572 - L1MD1 LINE L1 0 6242 6071 1608 151 9 25 chr5 1669827 1670178 -197959972 - MER4A LTR ERV1 0 664 261 578 133 0 10 chr5 1670178 1670276 -197959874 - MER4A LTR ERV1 -566 98 2 683 196 0 8 chr5 1670751 1670884 -197959266 + FLAM_A SINE Alu 2 133 0 520 255 121 118 chr5 1670938 1671436 -197958714 + L1MEd LINE L1 661 1159 -4960 231 262 0 0 chr5 1672014 1672075 -197958075 + MER20B DNA MER1_type 481 541 -242 452 240 118 36 chr5 1674318 1674707 -197955443 - MER77 LTR ERV1 -102 503 1 2285 97 10 16 chr5 1674909 1675220 -197954930 + AluSg SINE Alu 1 309 -1 710 239 46 10 chr5 1676589 1676786 -197953364 + L1MA10 LINE L1 6121 6324 -10 2559 176 36 2 chr5 1678054 1678532 -197951618 + LOR1a LTR ERV1 4 497 0 1195 304 54 21 chr5 1679247 1680231 -197949919 - L1ME1 LINE L1 -172 5994 4976 267 297 85 18 chr5 1680895 1681060 -197949090 + L2 LINE L2 2706 2881 -433 2284 104 0 0 chr5 1681176 1681463 -197948687 + AluSx SINE Alu 1 287 -25 253 241 158 59 chr5 1681499 1681702 -197948448 + L1ME LINE L1 5303 5525 -639 250 295 84 36 chr5 1681833 1681999 -197948151 + L1ME LINE L1 5650 5823 -347 232 176 0 0 chr5 1682457 1682508 -197947642 + Alu SINE Alu 248 298 -4 204 135 0 0 chr5 1684413 1684450 -197945700 + (GAA)n Simple_repeat Simple_repeat 3 39 0 189 0 0 0 chr5 1685229 1685250 -197944900 + (TTTC)n Simple_repeat Simple_repeat 2 22 0 226 160 20 20 chr5 1686092 1686142 -197944008 + MLT2D LTR ERVL 249 298 -116 268 265 33 9 chr5 1693817 1693952 -197936198 + L2 LINE L2 2851 2987 -285 227 370 24 18 chr5 1693968 1694133 -197936017 + L2 LINE L2 2870 3035 -237 305 111 93 0 chr5 1694264 1694318 -197935832 + MADE1 DNA Mariner 1 59 -21 180 315 14 84 chr5 1694330 1694473 -197935677 + L2 LINE L2 3107 3239 -74 581 277 16 41 chr5 1695286 1695319 -197934831 + L2 LINE L2 3078 3110 -203 2042 144 10 13 chr5 1695319 1695511 -197934639 - AluJb SINE Alu 0 312 120 459 0 0 0 chr5 1695511 1695562 -197934588 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 2042 144 10 13 chr5 1695562 1695682 -197934468 - AluJb SINE Alu -192 120 1 581 277 16 41 chr5 1695682 1695890 -197934260 + L2 LINE L2 3110 3313 0 1648 92 14 0 chr5 1696183 1696400 -197933750 - AluSg/x SINE Alu -1 311 92 2048 118 0 4 chr5 1696403 1696702 -197933448 + AluY SINE Alu 13 310 0 473 141 0 0 chr5 1697278 1697349 -197932801 + FLAM SINE Alu 49 119 -24 1259 162 44 0 chr5 1697590 1697794 -197932356 - AluJb SINE Alu -15 297 85 736 162 0 0 chr5 1698584 1698701 -197931449 - FLAM_C SINE Alu -16 117 1 421 235 0 43 chr5 1701787 1701974 -197928176 + G-rich Low_complexity Low_complexity 2 180 0 1235 142 43 114 chr5 1702403 1702728 -197927422 + AluJb SINE Alu 1 302 0 2270 78 3 3 chr5 1702738 1703044 -197927106 + AluSp SINE Alu 1 306 -7 292 157 114 0 chr5 1704277 1704347 -197925803 + MER5A DNA MER1_type 47 124 -65 613 247 110 46 chr5 1706664 1707088 -197923062 + MLT1D LTR MaLR 30 457 -10 402 269 157 15 chr5 1707772 1707969 -197922181 - L1ME LINE L1 -311 5810 5586 405 329 43 18 chr5 1710232 1710396 -197919754 + L1MEd LINE L1 922 1089 -5030 941 156 88 34 chr5 1710439 1710644 -197919506 - MLT1A1 LTR MaLR -11 354 139 656 291 103 19 chr5 1711285 1711316 -197918834 + L1MB7 LINE L1 5848 5875 -309 2256 78 0 7 chr5 1711316 1711612 -197918538 + AluY SINE Alu 1 294 -17 656 291 103 19 chr5 1711612 1711832 -197918318 + L1MB7 LINE L1 5875 6111 -73 9718 35 5 0 chr5 1713859 1715779 -197914371 + L1PA5 LINE L1 4222 6149 -5 1870 112 10 56 chr5 1716162 1716466 -197913684 + AluSx SINE Alu 3 292 -20 2228 120 0 0 chr5 1716653 1716961 -197913189 + AluSx SINE Alu 1 308 -4 457 176 79 22 chr5 1716986 1717135 -197913015 - L1P LINE L1 -748 5406 5254 3806 184 13 5 chr5 1717137 1717888 -197912262 + L1MA4A LINE L1 5372 6128 -175 2010 112 36 10 chr5 1717888 1718341 -197911809 - AluSx SINE Alu 0 461 1 913 175 35 0 chr5 1718344 1718515 -197911635 + L1MA4 LINE L1 6116 6292 -8 310 340 77 19 chr5 1718772 1718928 -197911222 + L1ME4a LINE L1 5476 5640 -481 275 297 123 36 chr5 1718928 1719123 -197911027 + MER58C DNA MER1_type 4 215 0 402 282 91 112 chr5 1719164 1719504 -197910646 + L1ME4a LINE L1 5693 6025 -96 223 248 0 60 chr5 1719667 1719784 -197910366 + (GGGTG)n Simple_repeat Simple_repeat 3 112 0 286 236 8 57 chr5 1721433 1721556 -197908594 + (CGTG)n Simple_repeat Simple_repeat 1 117 0 214 171 0 0 chr5 1722653 1722694 -197907456 + GA-rich Low_complexity Low_complexity 2 42 0 209 130 0 43 chr5 1722776 1722822 -197907328 + (CCCCCA)n Simple_repeat Simple_repeat 4 47 0 858 284 118 5 chr5 1723511 1723916 -197906234 + MLT1C LTR MaLR 17 467 0 539 167 113 20 chr5 1724331 1724481 -197905669 - ORSL DNA AcHobo -8 267 104 336 262 2 43 chr5 1724654 1724748 -197905402 - MLT1C LTR MaLR -45 460 331 657 196 104 159 chr5 1724753 1725119 -197905031 + MLT1A2 LTR MaLR 1 365 -25 2070 138 3 0 chr5 1725614 1725925 -197904225 - AluSq SINE Alu -1 312 1 1029 284 57 3 chr5 1727586 1727917 -197902233 - MLT1A2 LTR MaLR 0 374 26 253 178 42 0 chr5 1728637 1728755 -197901395 + (TG)n Simple_repeat Simple_repeat 2 124 0 210 326 32 21 chr5 1730362 1730457 -197899693 - L3 LINE CR1 -236 1341 1246 306 251 0 0 chr5 1730562 1730790 -197899360 + (TG)n Simple_repeat Simple_repeat 1 228 0 347 205 0 43 chr5 1730811 1730996 -197899154 + (TG)n Simple_repeat Simple_repeat 2 178 0 337 286 162 11 chr5 1732286 1732471 -197897679 - MIR SINE MIR -48 214 2 228 306 24 57 chr5 1732498 1732622 -197897528 + L2 LINE L2 3180 3299 -14 180 0 0 0 chr5 1732626 1732646 -197897504 + (TGAA)n Simple_repeat Simple_repeat 1 20 0 1178 118 0 15 chr5 1734182 1734386 -197895764 - L1P5 LINE L1 -662 5489 5289 747 86 19 0 chr5 1734386 1734491 -197895659 + MER30 DNA MER1_type 124 230 0 201 119 0 134 chr5 1735058 1735125 -197895025 + (CGGGGG)n Simple_repeat Simple_repeat 5 62 0 574 133 10 10 chr5 1736365 1736463 -197893687 + MER4A LTR ERV1 1 98 -566 * 1651 126 22 62 chr5 1736459 1736823 -197893327 + MER4A LTR ERV1 257 664 0 21 36 0 0 chr5 1739254 1739282 -197890868 + AT_rich Low_complexity Low_complexity 1 28 0 565 261 32 13 chr5 1739338 1739495 -197890655 + MER63 DNA MER1_type 3 788 -274 246 263 0 91 chr5 1739829 1739928 -197890222 + MIR SINE MIR 6 95 -167 206 333 118 7 chr5 1740998 1741151 -197888999 + MIR SINE MIR 33 202 -60 189 0 0 0 chr5 1741239 1741260 -197888890 + (TA)n Simple_repeat Simple_repeat 2 22 0 1706 147 3 49 chr5 1741261 1741567 -197888583 - AluJb SINE Alu -20 292 1 2299 99 0 3 chr5 1741581 1741894 -197888256 - AluSx SINE Alu 0 312 1 654 316 78 20 chr5 1741965 1742259 -197887891 + L1MEd LINE L1 771 1081 -5038 235 279 83 25 chr5 1742302 1742506 -197887644 + L1MEd LINE L1 1171 1386 -4924 291 242 116 0 chr5 1742512 1742607 -197887543 - L1MEc LINE L1 -5404 992 887 636 321 61 31 chr5 1742636 1743087 -197887063 + L1MEc LINE L1 820 1291 -5430 2169 105 7 0 chr5 1743087 1743383 -197886767 + AluSp SINE Alu 1 298 -15 636 321 61 31 chr5 1743383 1743473 -197886677 + L1MEc LINE L1 1291 1377 -5344 25 51 0 0 chr5 1743491 1743530 -197886620 + AT_rich Low_complexity Low_complexity 1 39 0 1636 158 42 3 chr5 1743561 1743871 -197886279 - MER47A DNA MER2_type -43 323 2 625 309 94 18 chr5 1743875 1744364 -197885786 + L1MEc LINE L1 1342 1867 -4673 3932 140 36 12 chr5 1744366 1745025 -197885125 - L1MA4A LINE L1 -5 7360 6686 11741 177 33 33 chr5 1745026 1745093 -197885057 - L1MA4A LINE L1 -742 6620 6555 2169 125 0 0 chr5 1745093 1745397 -197884753 - AluSx SINE Alu -2 310 7 11741 177 33 33 chr5 1745397 1748536 -197881614 - L1MA4A LINE L1 -807 6555 3418 2490 154 9 37 chr5 1748536 1748972 -197881178 - MSTB LTR MaLR -2 424 1 11741 177 33 33 chr5 1748972 1748998 -197881152 - L1MA4A LINE L1 -3944 3418 3394 560 268 98 5 chr5 1748999 1749193 -197880957 - L1MA4A LINE L1 -5485 1724 1501 * 2137 220 55 0 chr5 1749189 1749680 -197880470 - L1MA4A LINE L1 -6691 518 1 1148 253 85 45 chr5 1749742 1749861 -197880289 + L1MEc LINE L1 1914 2027 -4694 2692 3 0 7 chr5 1749861 1750166 -197879984 + AluYa5 SINE Alu 1 303 -8 1148 253 85 45 chr5 1750166 1750718 -197879432 + L1MEc LINE L1 2027 2612 -4109 1918 238 120 86 chr5 1750763 1751443 -197878707 + L1MEc LINE L1 2669 3407 -3133 2085 110 7 0 chr5 1751443 1751733 -197878417 + AluSx SINE Alu 8 299 -13 1918 238 120 86 chr5 1751733 1752198 -197877952 + L1MEc LINE L1 3407 3854 -2686 279 338 7 7 chr5 1753327 1753466 -197876684 + (TG)n Simple_repeat Simple_repeat 2 140 0 22 0 0 0 chr5 1753486 1753508 -197876642 + AT_rich Low_complexity Low_complexity 1 22 0 612 169 0 0 chr5 1755720 1755850 -197874300 + (TG)n Simple_repeat Simple_repeat 2 131 0 320 235 29 11 chr5 1755933 1755965 -197874185 + MER69 DNA AcHobo 61 91 -2435 2254 106 0 0 chr5 1755965 1756268 -197873882 - AluSc SINE Alu -3 306 4 320 235 29 11 chr5 1756268 1756352 -197873798 + MER69 DNA AcHobo 91 2526 0 306 360 0 0 chr5 1756840 1756965 -197873185 + L1M4 LINE L1 3242 3366 -2780 296 322 0 0 chr5 1757059 1757146 -197873004 + L1M4 LINE L1 3280 3366 -2780 255 299 0 0 chr5 1757169 1757236 -197872914 + L1M4 LINE L1 3300 3366 -2780 333 279 12 0 chr5 1757240 1757326 -197872824 + L1M4 LINE L1 3280 3366 -2780 277 314 12 0 chr5 1757330 1757416 -197872734 + L1M4 LINE L1 3280 3366 -2780 330 279 12 0 chr5 1757420 1757506 -197872644 + L1M4 LINE L1 3280 3366 -2780 * 420 297 7 0 chr5 1757501 1757646 -197872504 - L1M4 LINE L1 -1314 4832 4687 592 120 9 3 chr5 1757652 1757888 -197872262 + AluSp SINE Alu 1 301 -12 1200 223 187 45 chr5 1757891 1758108 -197872042 - L1M4 LINE L1 -1465 4681 4496 1741 183 3 0 chr5 1758108 1758419 -197871731 - AluJb SINE Alu 0 312 1 1200 223 187 45 chr5 1758419 1758723 -197871427 - L1M4 LINE L1 -1650 4496 4237 2045 132 0 0 chr5 1758723 1759026 -197871124 - AluSx SINE Alu -9 303 1 1200 223 187 45 chr5 1759026 1759213 -197870937 - L1M4 LINE L1 -1909 4237 3871 2079 112 14 0 chr5 1759243 1759539 -197870611 - AluSx SINE Alu -12 300 1 1628 224 133 79 chr5 1759869 1760574 -197869576 - LTR1B LTR ERV1 -81 745 3 807 287 45 33 chr5 1760623 1760957 -197869193 - L1ME2 LINE L1 -30 6134 5797 1577 185 207 36 chr5 1760982 1761475 -197868675 + LTR8A LTR ERV1 1 577 -150 1343 286 54 41 chr5 1761475 1761983 -197868167 - L1MDa LINE L1 -4378 2162 1662 2328 84 0 0 chr5 1761983 1762293 -197867857 - AluY SINE Alu -1 310 1 1343 286 54 41 chr5 1762293 1762823 -197867327 - L1MDa LINE L1 -4878 1662 1111 2484 41 0 0 chr5 1762823 1763117 -197867033 - AluY SINE Alu -17 294 1 513 315 47 17 chr5 1763445 1763680 -197866470 - L1MDa LINE L1 -5652 878 637 1578 163 3 18 chr5 1763948 1764231 -197865919 + AluJb SINE Alu 1 279 -33 189 0 0 0 chr5 1764248 1764269 -197865881 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 235 314 83 12 chr5 1764446 1764615 -197865535 - L1MCa LINE L1 -4594 2013 1833 362 22 0 0 chr5 1764646 1764691 -197865459 + MADE1 DNA Mariner 35 79 -1 17596 94 40 26 chr5 1764694 1767234 -197862916 - Charlie3 DNA MER1_type -135 2575 1 306 239 100 30 chr5 1767434 1767668 -197862482 - L1MCa LINE L1 -4879 1547 1282 1186 137 0 0 chr5 1767731 1767945 -197862205 - AluSg/x SINE Alu 0 323 110 1265 86 0 17 chr5 1768282 1768457 -197861693 + AluSg/x SINE Alu 120 291 -19 628 294 60 16 chr5 1773035 1773287 -197856863 + HAL1 LINE L1 19 281 -2226 1753 47 0 5 chr5 1773402 1773617 -197856533 + AluY SINE Alu 82 295 -16 222 91 0 0 chr5 1775566 1775599 -197854551 + (TG)n Simple_repeat Simple_repeat 1 33 0 351 201 75 19 chr5 1775625 1775784 -197854366 + (TG)n Simple_repeat Simple_repeat 1 168 0 242 211 42 21 chr5 1776624 1776719 -197853431 + (CA)n Simple_repeat Simple_repeat 1 97 0 1276 302 67 17 chr5 1776766 1777365 -197852785 + L1MEc LINE L1 125 753 -5643 43669 32 23 1 chr5 1777368 1783384 -197846766 + L1PA3 LINE L1 5 6155 0 382 176 0 0 chr5 1783383 1783451 -197846699 + L1MEc LINE L1 738 805 -5591 * 226 170 0 43 chr5 1783451 1783498 -197846652 + MLT1B LTR MaLR 1 45 -345 1051 97 58 0 chr5 1783530 1783684 -197846466 - AluSg/x SINE Alu -16 294 132 1760 141 61 0 chr5 1783684 1783961 -197846189 - AluSq SINE Alu -19 294 1 486 298 39 12 chr5 1783972 1784227 -197845923 - L1M4 LINE L1 -2305 3841 3580 1867 160 30 24 chr5 1784227 1784800 -197845350 + LTR10E LTR ERV1 1 627 -6 273 128 0 0 chr5 1784800 1784839 -197845311 - L1M4 LINE L1 -2577 3569 3531 * 405 180 7 167 chr5 1784834 1784877 -197845273 + L1ME LINE L1 5558 5606 -560 2148 124 0 6 chr5 1784877 1785191 -197844959 + AluSx SINE Alu 1 312 0 405 180 7 167 chr5 1785191 1785297 -197844853 + L1ME LINE L1 5606 5683 -483 441 259 9 0 chr5 1785410 1785526 -197844624 + L1MA10 LINE L1 6210 6326 -8 24 0 0 0 chr5 1785540 1785564 -197844586 + AT_rich Low_complexity Low_complexity 1 24 0 1925 157 0 0 chr5 1785661 1785961 -197844189 + AluSx SINE Alu 1 300 -12 451 309 47 13 chr5 1785964 1786262 -197843888 + L1MEc LINE L1 1036 1343 -4862 242 303 25 17 chr5 1786431 1786550 -197843600 + L1MEc LINE L1 1512 1631 -4765 205 258 32 0 chr5 1788007 1788069 -197842081 + L2 LINE L2 2306 2369 -945 898 224 0 0 chr5 1789428 1789611 -197840539 - AluJ SINE Alu -9 303 121 787 188 0 0 chr5 1789651 1789779 -197840371 - AluJ SINE Alu -171 141 14 204 40 0 0 chr5 1789795 1789820 -197840330 + (T)n Simple_repeat Simple_repeat 1 25 0 218 40 40 40 chr5 1790181 1790231 -197839919 + (TTTTA)n Simple_repeat Simple_repeat 1 50 0 1126 31 0 0 chr5 1790231 1790361 -197839789 - L1PA3 LINE L1 -24 6131 6002 502 188 0 23 chr5 1790918 1791051 -197839099 + CT-rich Low_complexity Low_complexity 4 133 0 248 196 0 36 chr5 1791159 1791215 -197838935 + CT-rich Low_complexity Low_complexity 3 56 0 614 257 59 21 chr5 1791413 1791650 -197838500 - MER33 DNA MER1_type -74 250 5 1325 240 52 3 chr5 1792261 1792623 -197837527 - MER70B LTR ERVL 0 578 199 330 306 45 0 chr5 1792966 1793100 -197837050 - MER70B LTR ERVL -424 154 15 240 35 0 0 chr5 1793166 1793195 -197836955 + (TCCCC)n Simple_repeat Simple_repeat 3 31 0 300 118 71 35 chr5 1843376 1843546 -197786604 + (CA)n Simple_repeat Simple_repeat 1 176 0 380 121 80 12 chr5 1843628 1844048 -197786102 + (CA)n Simple_repeat Simple_repeat 1 448 0 342 119 66 37 chr5 1844588 1844832 -197785318 + (CA)n Simple_repeat Simple_repeat 1 251 0 2668 213 59 6 chr5 1845760 1846386 -197783764 + LTR34 LTR ERV1 1 659 -40 1977 118 0 4 chr5 1846387 1846667 -197783483 + AluSx SINE Alu 1 279 -33 233 204 20 0 chr5 1846791 1846840 -197783310 + LTR34 LTR ERV1 650 699 0 270 237 22 0 chr5 1847442 1847581 -197782569 + G-rich Low_complexity Low_complexity 4 145 0 410 261 6 0 chr5 1847600 1847776 -197782374 + G-rich Low_complexity Low_complexity 3 179 0 374 250 0 0 chr5 1847779 1847895 -197782255 + (CTGGGG)n Simple_repeat Simple_repeat 3 118 0 11278 126 9 21 chr5 1849210 1851006 -197779144 - L1P LINE L1 -4360 1786 11 353 189 19 39 chr5 1852920 1853136 -197777014 + (CACCAT)n Simple_repeat Simple_repeat 1 211 0 420 220 11 40 chr5 1853162 1853339 -197776811 + (CACCAT)n Simple_repeat Simple_repeat 6 177 0 2018 120 0 3 chr5 1855824 1856124 -197774026 - AluSg SINE Alu -11 299 1 1066 298 77 32 chr5 1856378 1856845 -197773305 + L1ME1 LINE L1 5670 6157 -9 513 291 190 51 chr5 1856850 1857043 -197773107 + HAL1 LINE L1 1549 1714 -793 2133 100 3 7 chr5 1857043 1857344 -197772806 + AluSx SINE Alu 1 300 -12 513 291 190 51 chr5 1857344 1857992 -197772158 + HAL1 LINE L1 1714 2507 0 450 310 31 66 chr5 1858268 1858555 -197771595 + MLT1J LTR MaLR 225 501 -10 373 263 49 21 chr5 1859119 1859414 -197770736 + MLT1D LTR MaLR 89 389 -78 872 200 47 0 chr5 1860343 1860513 -197769637 + MER58A DNA MER1_type 46 223 -1 361 224 22 60 chr5 1860617 1860751 -197769399 + L1ME4a LINE L1 5966 6094 -27 2131 99 0 0 chr5 1860753 1861077 -197769073 - AluSx SINE Alu 0 324 1 395 250 0 49 chr5 1861251 1861395 -197768755 + GA-rich Low_complexity Low_complexity 1 137 0 230 150 0 0 chr5 1863546 1863586 -197766564 - MLT1H LTR MaLR -297 298 259 723 228 183 0 chr5 1865640 1865864 -197764286 - L1MB7 LINE L1 -2 6182 5918 2850 92 11 0 chr5 1865877 1866247 -197763903 - THE1C LTR MaLR -1 374 1 427 234 33 3 chr5 1866265 1866430 -197763720 + L1MB7 LINE L1 5683 5855 -329 291 321 0 43 chr5 1868748 1868888 -197761262 - MIR SINE MIR -15 247 114 315 213 0 0 chr5 1869602 1869677 -197760473 + (TG)n Simple_repeat Simple_repeat 2 76 0 542 292 111 58 chr5 1869886 1870129 -197760021 + MLT1J LTR MaLR 245 500 -11 250 327 131 6 chr5 1870536 1870704 -197759446 - MLT1H LTR MaLR -268 281 93 960 248 50 5 chr5 1871133 1871512 -197758638 - L1ME LINE L1 -2805 3275 2880 232 273 80 0 chr5 1871612 1871700 -197758450 - L1ME LINE L1 -4309 1952 1858 407 268 118 75 chr5 1871728 1872521 -197757629 - L1ME LINE L1 -4467 1794 833 1936 130 7 10 chr5 1872521 1872820 -197757330 + AluSx SINE Alu 1 298 -14 407 268 118 75 chr5 1872820 1873142 -197757008 - L1ME LINE L1 -5428 833 526 382 257 64 76 chr5 1873489 1873660 -197756490 - MLT1J2 LTR MaLR -10 440 272 213 314 24 65 chr5 1873877 1874001 -197756149 + L2 LINE L2 3100 3218 -54 276 344 85 27 chr5 1874192 1874416 -197755734 + L2 LINE L2 2572 2808 -506 195 319 44 33 chr5 1874415 1874506 -197755644 + L2 LINE L2 2972 3063 -209 * 193 267 17 17 chr5 1874540 1874600 -197755550 + L2 LINE L2 3180 3239 -74 2549 179 28 13 chr5 1874674 1875131 -197755019 + MLT2B3 LTR ERVL 1 464 -90 217 246 0 0 chr5 1875131 1875188 -197754962 + (TA)n Simple_repeat Simple_repeat 1 57 0 306 256 0 0 chr5 1875188 1875278 -197754872 - L1MC4 LINE L1 -1339 6703 6614 264 149 0 0 chr5 1875365 1875412 -197754738 + (CA)n Simple_repeat Simple_repeat 2 48 0 196 259 0 35 chr5 1875495 1875553 -197754597 + MIR SINE MIR 12 67 -195 215 173 19 0 chr5 1875695 1875747 -197754403 + CT-rich Low_complexity Low_complexity 1 53 0 1122 244 17 27 chr5 1876490 1876785 -197753365 + MLT1E LTR MaLR 302 593 0 234 331 31 39 chr5 1876795 1876925 -197753225 - MLT1L LTR MaLR -426 189 61 236 320 13 0 chr5 1877557 1877635 -197752515 + Tigger3(Golem) DNA MER2_type 1 79 -2950 696 205 53 16 chr5 1877872 1878062 -197752088 + L1MB7 LINE L1 5987 6183 -1 866 159 0 0 chr5 1878141 1878273 -197751877 + FLAM_C SINE Alu 1 132 -11 237 33 0 0 chr5 1878340 1878370 -197751780 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 287 245 136 71 chr5 1878394 1878549 -197751601 + L1MC5 LINE L1 7749 7913 -48 604 292 87 14 chr5 1882045 1882322 -197747828 - MLT1I LTR MaLR 0 409 113 803 271 138 35 chr5 1882595 1882935 -197747215 + MLT1E LTR MaLR 1 375 -218 822 146 0 15 chr5 1882958 1883088 -197747062 - THE1B LTR MaLR -1 363 236 1279 95 0 0 chr5 1883089 1883257 -197746893 + L1PA7 LINE L1 5983 6150 -4 3124 86 2 0 chr5 1883279 1883707 -197746443 - THE1B-int LTR MaLR -1151 429 1 1684 168 75 23 chr5 1883707 1884053 -197746097 - THE1B LTR MaLR 0 364 1 682 271 47 5 chr5 1884058 1884250 -197745900 + MLT1E LTR MaLR 394 593 0 357 331 14 0 chr5 1884257 1884399 -197745751 + MLT1E-int LTR MaLR 15 158 -1213 292 258 56 0 chr5 1884538 1884627 -197745523 + MLT1E-int LTR MaLR 442 535 -836 1820 218 21 42 chr5 1885688 1886165 -197743985 + MLT1C LTR MaLR 1 467 0 21 57 0 0 chr5 1891431 1891466 -197738684 + GC_rich Low_complexity Low_complexity 1 35 0 26 30 0 0 chr5 1891684 1891717 -197738433 + GC_rich Low_complexity Low_complexity 1 33 0 198 182 26 26 chr5 1893554 1893631 -197736519 + G-rich Low_complexity Low_complexity 3 79 0 26 30 0 0 chr5 1895737 1895770 -197734380 + GC_rich Low_complexity Low_complexity 1 33 0 408 307 0 51 chr5 1896910 1897200 -197732950 + C-rich Low_complexity Low_complexity 1 275 0 22 35 0 0 chr5 1897344 1897373 -197732777 + GC_rich Low_complexity Low_complexity 1 29 0 224 217 0 0 chr5 1898847 1898893 -197731257 + G-rich Low_complexity Low_complexity 5 50 0 2521 37 0 0 chr5 1899131 1899426 -197730724 + AluY SINE Alu 1 295 -16 201 74 0 0 chr5 1900015 1900042 -197730108 + (CCG)n Simple_repeat Simple_repeat 2 28 0 315 71 0 0 chr5 1903641 1903683 -197726467 + (T)n Simple_repeat Simple_repeat 1 42 0 220 204 0 0 chr5 1903888 1903937 -197726213 + CT-rich Low_complexity Low_complexity 5 53 0 232 151 12 70 chr5 1903955 1904041 -197726109 + CT-rich Low_complexity Low_complexity 1 81 0 252 272 10 48 chr5 1904685 1904788 -197725362 + G-rich Low_complexity Low_complexity 2 100 0 360 0 0 0 chr5 1905859 1905899 -197724251 + (CA)n Simple_repeat Simple_repeat 2 41 0 418 222 0 22 chr5 1907173 1907353 -197722797 + (CACG)n Simple_repeat Simple_repeat 4 179 0 485 177 0 43 chr5 1907370 1907556 -197722594 + (CACG)n Simple_repeat Simple_repeat 1 178 0 439 222 0 20 chr5 1907567 1907881 -197722269 + (CACG)n Simple_repeat Simple_repeat 1 307 0 347 233 0 14 chr5 1907915 1908061 -197722089 + (CACG)n Simple_repeat Simple_repeat 4 147 0 320 217 0 43 chr5 1908091 1908275 -197721875 + (CACG)n Simple_repeat Simple_repeat 4 179 0 * 357 263 0 0 chr5 1908268 1908443 -197721707 + (CA)n Simple_repeat Simple_repeat 1 175 0 217 355 0 11 chr5 1908497 1908590 -197721560 + (CA)n Simple_repeat Simple_repeat 1 92 0 222 191 0 0 chr5 1910515 1910557 -197719593 + (CGG)n Simple_repeat Simple_repeat 1 42 0 231 211 26 53 chr5 1912814 1912928 -197717222 + (CA)n Simple_repeat Simple_repeat 2 112 0 268 108 20 138 chr5 1913041 1913236 -197716914 + (CACAG)n Simple_repeat Simple_repeat 1 172 0 262 155 5 102 chr5 1913187 1913374 -197716776 + (CACG)n Simple_repeat Simple_repeat 3 171 0 * 201 222 0 81 chr5 1913405 1913590 -197716560 + (CA)n Simple_repeat Simple_repeat 1 170 0 1032 57 0 0 chr5 1916329 1916452 -197713698 + AluY SINE Alu 1 123 -188 1104 158 0 0 chr5 1916620 1916791 -197713359 + AluJb SINE Alu 135 305 -7 717 253 50 56 chr5 1918857 1919177 -197710973 - MLT2C1 LTR ERVL -65 332 15 218 283 45 34 chr5 1919441 1919585 -197710565 + MIR SINE MIR 62 206 -56 369 367 62 35 chr5 1920332 1920703 -197709447 + L1MDa LINE L1 1864 2244 -3971 2399 194 16 8 chr5 1920704 1921203 -197708947 + L1MC1 LINE L1 5430 5932 -401 1279 188 37 93 chr5 1921194 1921744 -197708406 + L1M3 LINE L1 5065 5582 -601 * 1900 61 0 0 chr5 1921844 1922108 -197708042 + L1HS LINE L1 5892 6155 0 207 69 0 0 chr5 1922108 1922137 -197708013 + (A)n Simple_repeat Simple_repeat 1 29 0 2161 123 7 0 chr5 1922238 1922540 -197707610 + AluSx SINE Alu 1 304 -8 543 291 41 6 chr5 1923299 1923471 -197706679 - MER45A DNA AcHobo 0 178 1 354 138 55 9 chr5 1923755 1923864 -197706286 + CT-rich Low_complexity Low_complexity 4 117 0 27 0 0 0 chr5 1923870 1923897 -197706253 + AT_rich Low_complexity Low_complexity 1 27 0 180 200 25 0 chr5 1925600 1925640 -197704510 - L2 LINE L2 -86 3186 3146 203 344 0 11 chr5 1926811 1926901 -197703249 + (TATG)n Simple_repeat Simple_repeat 1 89 0 243 354 0 22 chr5 1928976 1929157 -197700993 + (CCTA)n Simple_repeat Simple_repeat 2 178 0 803 332 115 46 chr5 1929984 1930849 -197699301 + L1MDa LINE L1 2271 4241 -1974 2189 92 3 23 chr5 1931087 1931391 -197698759 + AluSx SINE Alu 1 298 -14 960 298 74 47 chr5 1932663 1933781 -197696369 - L1ME LINE L1 -486 5684 4533 1097 233 60 6 chr5 1934220 1934537 -197695613 + MLT1A1 LTR MaLR 20 353 -12 1615 254 109 2 chr5 1935555 1936040 -197694110 - MER82 DNA MER2_type -1 652 116 502 226 10 36 chr5 1936375 1936825 -197693325 + (CA)n Simple_repeat Simple_repeat 1 438 0 263 194 39 0 chr5 1936852 1936955 -197693195 + (CA)n Simple_repeat Simple_repeat 1 107 0 408 147 16 79 chr5 1937037 1937227 -197692923 + (CA)n Simple_repeat Simple_repeat 2 179 0 215 326 93 33 chr5 1937884 1938099 -197692051 + L2 LINE L2 2994 3221 -92 1115 266 18 39 chr5 1938772 1939103 -197691047 - MER33 DNA MER1_type 0 324 1 262 293 0 0 chr5 1939128 1939203 -197690947 + MER58 DNA MER1_type 36 110 -105 5035 203 57 21 chr5 1940321 1940589 -197689561 - Tigger3b DNA MER2_type -1816 1212 955 2296 86 0 3 chr5 1940589 1940891 -197689259 + AluY SINE Alu 1 301 -10 5035 203 57 21 chr5 1940891 1941789 -197688361 - Tigger3b DNA MER2_type -2073 955 4 662 228 53 0 chr5 1942314 1942485 -197687665 + MER5A DNA MER1_type 5 184 -5 21 36 0 0 chr5 1942985 1943013 -197687137 + AT_rich Low_complexity Low_complexity 1 28 0 405 304 89 5 chr5 1943117 1943250 -197686900 + Charlie5 DNA MER1_type 2391 2550 -74 1793 161 0 32 chr5 1943250 1943566 -197686584 - AluJb SINE Alu -2 310 5 405 304 89 5 chr5 1943566 1943646 -197686504 + Charlie5 DNA MER1_type 2550 2622 -2 230 340 19 19 chr5 1944069 1944175 -197685975 - L3b LINE CR1 -228 1355 1250 2441 21 0 0 chr5 1944241 1944567 -197685583 - L1HS LINE L1 -2832 3314 2989 * 16883 16 0 0 chr5 1944564 1947399 -197682751 + L1HS LINE L1 3321 6155 0 24 0 0 0 chr5 1947399 1947423 -197682727 + AT_rich Low_complexity Low_complexity 1 24 0 561 161 0 0 chr5 1947530 1947611 -197682539 + AluS SINE Alu 2 82 -231 1334 203 88 34 chr5 1948883 1949055 -197681095 - MLT1B LTR MaLR -16 374 213 2030 110 0 20 chr5 1949055 1949355 -197680795 - AluSg SINE Alu -16 294 1 1334 203 88 34 chr5 1949355 1949536 -197680614 - MLT1B LTR MaLR -177 213 2 2158 116 7 0 chr5 1949978 1950280 -197679870 + AluSx SINE Alu 1 304 -8 435 290 53 24 chr5 1951325 1951532 -197678618 - MLT1H LTR MaLR -4 545 333 400 282 28 14 chr5 1951589 1951767 -197678383 - MLT1H LTR MaLR -381 168 1 359 211 279 42 chr5 1953444 1953634 -197676516 - MLT1E1 LTR MaLR 0 654 420 521 254 101 21 chr5 1953694 1953883 -197676267 - MLT1E1 LTR MaLR -383 271 68 4067 197 11 5 chr5 1955012 1955820 -197674330 + L1MB3 LINE L1 5368 6180 -3 205 195 0 0 chr5 1956152 1956193 -197673957 + A-rich Low_complexity Low_complexity 1 41 0 2594 186 10 46 chr5 1956394 1956481 -197673669 + L1MA8 LINE L1 5260 5349 -942 2721 16 0 0 chr5 1956481 1956787 -197673363 + AluYb8 SINE Alu 3 308 -10 2594 186 10 46 chr5 1956787 1957286 -197672864 + L1MA8 LINE L1 5349 5825 -466 1476 245 90 25 chr5 1957317 1957382 -197672768 + L1MA9 LINE L1 5768 5827 -485 2075 118 0 13 chr5 1957382 1957688 -197672462 + AluSq SINE Alu 1 302 -11 1476 245 90 25 chr5 1957688 1958135 -197672015 + L1MA9 LINE L1 5827 6312 0 32 75 0 0 chr5 1958143 1958210 -197671940 + AT_rich Low_complexity Low_complexity 1 67 0 598 318 37 16 chr5 1958623 1958868 -197671282 + MLT1A1 LTR MaLR 116 365 0 609 261 73 9 chr5 1958874 1959092 -197671058 - MLT1E1 LTR MaLR -5 649 418 362 280 47 35 chr5 1959126 1959311 -197670839 - MLT1E3 LTR MaLR -382 272 79 604 267 101 17 chr5 1961533 1961975 -197668175 + L1ME2 LINE L1 5043 5517 -647 1083 249 22 11 chr5 1961979 1962256 -197667894 - L1MA6 LINE L1 -36 6264 5985 482 362 29 12 chr5 1962270 1962516 -197667634 + L1ME2 LINE L1 5539 5788 -376 667 266 30 94 chr5 1962631 1963003 -197667147 + L1ME2 LINE L1 5804 6151 -13 21 0 0 0 chr5 1963173 1963194 -197666956 + AT_rich Low_complexity Low_complexity 1 21 0 457 174 43 0 chr5 1963287 1963379 -197666771 + MER85 DNA T2_type 32 127 -12 243 292 108 8 chr5 1963494 1963624 -197666526 - MLT1E LTR MaLR -448 145 3 24 32 0 0 chr5 1965565 1965596 -197664554 + AT_rich Low_complexity Low_complexity 1 31 0 1999 100 14 60 chr5 1968261 1968446 -197661704 - THE1C LTR MaLR -40 335 172 2280 94 3 0 chr5 1968446 1968753 -197661397 + AluSg1 SINE Alu 1 308 -1 1999 100 14 60 chr5 1968753 1968918 -197661232 - THE1C LTR MaLR -203 172 1 201 328 0 0 chr5 1970072 1970130 -197660020 - MIR SINE MIR -111 151 94 457 298 82 21 chr5 1970909 1971238 -197658912 - L1ME4a LINE L1 0 6121 5773 474 272 151 8 chr5 1971247 1971486 -197658664 - MLT1C LTR MaLR -8 459 187 760 198 38 17 chr5 1971651 1971861 -197658289 - MLT1C LTR MaLR -176 214 1 1264 246 107 17 chr5 1973310 1973712 -197656438 + MLT1C LTR MaLR 1 438 -29 564 280 24 47 chr5 1974553 1974764 -197655386 + MIR SINE MIR 24 229 -33 608 182 19 71 chr5 1974924 1975078 -197655072 - MLT2D LTR ERVL -8 406 261 972 248 43 14 chr5 1975228 1975510 -197654640 - MLT2D LTR ERVL -108 306 17 286 339 0 0 chr5 1980382 1980509 -197649641 + HERVL LTR ERVL 907 1033 -4621 1541 166 26 12 chr5 1981080 1981567 -197648583 + MER50 LTR ERV1 1 711 -23 1749 177 53 29 chr5 1981568 1981947 -197648203 - MSTC LTR MaLR -40 388 1 548 266 120 66 chr5 1981949 1982283 -197647867 + HERVL LTR ERVL 1678 2029 -3735 222 336 76 0 chr5 1983115 1983234 -197646916 + L2 LINE L2 3183 3310 -3 535 269 62 10 chr5 1984064 1984272 -197645878 + MER20 DNA MER1_type 1 219 0 189 0 0 0 chr5 1985403 1985424 -197644726 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1484 158 57 0 chr5 1990714 1990960 -197639190 - AluJo SINE Alu -9 303 44 1133 303 77 0 chr5 1991262 1991727 -197638423 + L1MC2 LINE L1 5832 6332 -12 554 206 19 7 chr5 1991733 1991888 -197638262 + GA-rich Low_complexity Low_complexity 2 158 0 1072 172 62 10 chr5 1991888 1992097 -197638053 + AluJo SINE Alu 1 220 -92 259 211 13 40 chr5 1993621 1993697 -197636453 + G-rich Low_complexity Low_complexity 3 76 0 271 360 65 13 chr5 1998082 1998235 -197631915 + MIR3 SINE MIR 18 178 -30 332 323 45 0 chr5 1998246 1998401 -197631749 - MLT1B LTR MaLR -2 652 491 334 358 0 15 chr5 1998416 1998550 -197631600 + (CGTG)n Simple_repeat Simple_repeat 4 135 0 477 324 78 70 chr5 1999207 2000233 -197629917 + L1MEc LINE L1 810 1450 -4946 202 270 20 20 chr5 2000366 2000466 -197629684 + (TATATG)n Simple_repeat Simple_repeat 5 104 0 347 256 22 44 chr5 2000536 2000626 -197629524 + L1MC4 LINE L1 6615 6702 -1340 221 381 0 11 chr5 2000628 2000809 -197629341 + (TATATG)n Simple_repeat Simple_repeat 2 180 0 1982 110 29 0 chr5 2001293 2001591 -197628559 + AluSx SINE Alu 1 306 0 431 283 23 34 chr5 2004503 2004680 -197625470 - MLT1C LTR MaLR -227 240 66 2205 102 0 7 chr5 2006176 2006480 -197623670 + AluSp SINE Alu 1 302 -11 911 211 154 0 chr5 2011516 2011795 -197618355 - MLT1B LTR MaLR -68 322 1 21 0 0 0 chr5 2013957 2013978 -197616172 + AT_rich Low_complexity Low_complexity 1 21 0 236 253 0 11 chr5 2014508 2014595 -197615555 + G-rich Low_complexity Low_complexity 3 88 0 3055 238 63 16 chr5 2015349 2015490 -197614660 - Charlie1 DNA MER1_type -2 2759 2626 2044 108 14 0 chr5 2015490 2015777 -197614373 + AluSg SINE Alu 2 292 -18 3055 238 63 16 chr5 2015777 2016182 -197613968 - Charlie1 DNA MER1_type -135 2626 2241 2350 73 0 16 chr5 2016182 2016485 -197613665 - AluSq SINE Alu -15 298 1 3055 238 63 16 chr5 2016485 2016905 -197613245 - Charlie1 DNA MER1_type -520 2241 1747 270 191 0 76 chr5 2017107 2017239 -197612911 + (CCCCG)n Simple_repeat Simple_repeat 1 121 0 768 211 112 12 chr5 2017318 2017560 -197612590 - MLT1A1 LTR MaLR -99 266 1 2070 120 0 0 chr5 2021045 2021351 -197608799 + AluSx SINE Alu 3 308 0 1163 260 65 38 chr5 2021375 2021855 -197608295 + L1MDa LINE L1 20 512 -6028 283 210 49 0 chr5 2021928 2022009 -197608141 + L1MA7 LINE L1 6205 6289 -2 * 596 239 54 33 chr5 2022002 2022134 -197608016 + L1MDa LINE L1 2454 2582 -3958 2057 100 20 13 chr5 2022134 2022434 -197607716 + AluSg SINE Alu 6 307 -3 596 239 54 33 chr5 2022434 2022631 -197607519 + L1MDa LINE L1 2582 2788 -3752 493 287 16 0 chr5 2022631 2022760 -197607390 - ERVL LTR ERVL -3721 2043 1913 775 219 105 4 chr5 2022905 2023143 -197607007 + MLT1C LTR MaLR 13 274 -193 341 324 0 0 chr5 2023450 2023626 -197606524 + GA-rich Low_complexity Low_complexity 4 179 0 554 215 67 53 chr5 2023636 2023845 -197606305 + MLT1C LTR MaLR 256 467 0 346 281 78 39 chr5 2025060 2025188 -197604962 - L1ME4a LINE L1 -11 6110 5978 325 356 11 40 chr5 2025234 2025411 -197604739 - L1MC4a LINE L1 -1896 5912 5741 347 367 41 20 chr5 2025626 2025822 -197604328 - L1MC4a LINE L1 -756 5390 5191 500 352 89 42 chr5 2025824 2026281 -197603869 + L1MDa LINE L1 2417 2889 -3651 232 309 12 0 chr5 2026389 2026470 -197603680 + L1MDa LINE L1 3119 3200 -3340 615 319 112 13 chr5 2026524 2027214 -197602936 + L1MDa LINE L1 3316 4073 -2467 219 286 0 0 chr5 2027470 2027526 -197602624 + C-rich Low_complexity Low_complexity 1 56 0 369 346 134 60 chr5 2027871 2028380 -197601770 - HAL1b LINE L1 -635 1596 208 339 270 0 0 chr5 2028382 2028620 -197601530 + CT-rich Low_complexity Low_complexity 1 238 0 1194 189 84 3 chr5 2030209 2030534 -197599616 + MLT1B LTR MaLR 15 379 -11 355 375 67 47 chr5 2031120 2031461 -197598689 - L1MC4 LINE L1 0 8042 7695 588 304 55 45 chr5 2032159 2032218 -197597932 + L1MC5 LINE L1 6555 6612 -1196 2333 81 3 0 chr5 2032218 2032515 -197597635 - AluSx SINE Alu -14 298 1 588 304 55 45 chr5 2032515 2032871 -197597279 + L1MC5 LINE L1 6612 6902 -906 677 185 71 28 chr5 2032907 2033253 -197596897 + MSTC LTR MaLR 1 427 -1 1376 216 120 40 chr5 2033253 2033902 -197596248 + L1MC5 LINE L1 6994 7694 -267 2466 168 23 12 chr5 2033971 2034399 -197595751 - Tigger2a DNA MER2_type 0 434 2 271 260 76 18 chr5 2037368 2037484 -197592666 + LTR50 LTR ERVL 327 447 -76 2124 165 49 180 chr5 2037827 2038637 -197591513 - L1MB3 LINE L1 0 6183 5480 1804 171 3 3 chr5 2039933 2040238 -197589912 - AluJb SINE Alu -7 305 1 1452 188 124 3 chr5 2040263 2040609 -197589541 + L1MC2 LINE L1 5941 6328 -16 429 260 19 0 chr5 2041856 2041960 -197588190 - MER117 DNA MER1_type -53 144 39 29 28 0 0 chr5 2042814 2042850 -197587300 + AT_rich Low_complexity Low_complexity 1 36 0 234 286 13 0 chr5 2044968 2045045 -197585105 + L1MC4 LINE L1 7960 8037 -5 591 248 170 47 chr5 2047022 2047430 -197582720 - MLT1H1 LTR MaLR 0 555 44 188 228 18 0 chr5 2048190 2048247 -197581903 + (TG)n Simple_repeat Simple_repeat 2 59 0 520 271 67 5 chr5 2049057 2049261 -197580889 - MER20 DNA MER1_type 0 219 4 239 328 106 29 chr5 2049281 2049629 -197580521 - LTR16C LTR ERVL -36 455 81 1272 184 104 12 chr5 2050449 2050776 -197579374 + MLT1A1 LTR MaLR 1 357 -8 473 249 110 29 chr5 2052210 2052383 -197577767 + MER58A DNA MER1_type 35 221 -3 1900 142 0 34 chr5 2052583 2052906 -197577244 + AluSx SINE Alu 1 312 0 1870 158 10 0 chr5 2053409 2053706 -197576444 + AluJb SINE Alu 1 300 -12 1258 252 102 21 chr5 2053787 2054219 -197575931 - MLT1C LTR MaLR 0 467 1 22 0 0 0 chr5 2054238 2054260 -197575890 + AT_rich Low_complexity Low_complexity 1 22 0 4703 87 17 17 chr5 2055422 2056056 -197574094 - MER51A LTR ERV1 0 634 1 354 325 163 0 chr5 2056918 2057084 -197573066 - MIR SINE MIR -7 255 63 312 180 36 18 chr5 2057229 2057340 -197572810 + (CAGAGA)n Simple_repeat Simple_repeat 1 113 0 180 333 61 8 chr5 2059359 2059491 -197570659 - L2 LINE L2 -812 2502 2364 2083 104 7 0 chr5 2059605 2059893 -197570257 - AluSx SINE Alu -22 290 1 197 310 133 5 chr5 2060678 2060881 -197569269 - L2 LINE L2 -1102 2212 1984 2016 115 0 33 chr5 2061201 2061506 -197568644 + AluSx SINE Alu 1 295 -17 391 321 19 19 chr5 2062350 2062512 -197567638 + (CGTG)n Simple_repeat Simple_repeat 1 162 0 221 263 25 12 chr5 2062520 2062600 -197567550 + (TG)n Simple_repeat Simple_repeat 1 81 0 352 241 0 14 chr5 2063470 2063615 -197566535 + (CTGGGG)n Simple_repeat Simple_repeat 1 143 0 2309 171 18 2 chr5 2063986 2064383 -197565767 + MER57A LTR ERV1 1 403 0 1018 247 87 20 chr5 2067187 2067543 -197562607 - MLT1B LTR MaLR -7 383 4 308 272 48 32 chr5 2068516 2068641 -197561509 - L1ME4a LINE L1 -6 6115 5989 373 242 0 0 chr5 2068803 2068894 -197561256 - L1ME4a LINE L1 -204 5960 5870 * 2556 269 35 34 chr5 2068892 2069791 -197560359 - L1M4 LINE L1 -1946 4200 3207 1725 183 0 10 chr5 2069791 2070103 -197560047 - AluSx SINE Alu -3 309 1 2556 269 35 34 chr5 2070103 2070350 -197559800 - L1M4 LINE L1 -2939 3207 2962 23 0 0 0 chr5 2070456 2070479 -197559671 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr5 2070666 2070688 -197559462 + AT_rich Low_complexity Low_complexity 1 22 0 1612 171 0 4 chr5 2070690 2070953 -197559197 - AluJb SINE Alu -33 279 18 2117 116 3 0 chr5 2070964 2071266 -197558884 - AluSx SINE Alu -9 303 1 388 310 97 57 chr5 2071306 2071744 -197558406 - L1 LINE L1 -2742 3404 2804 1170 196 108 6 chr5 2072891 2073298 -197556852 + LTR45B LTR ERV1 3 603 0 181 262 115 0 chr5 2074056 2074117 -197556033 - MIR SINE MIR -75 133 66 2187 278 48 2 chr5 2074827 2075468 -197554682 - L1MB5 LINE L1 0 6174 5504 401 86 38 153 chr5 2075885 2076208 -197553942 + (CGGTG)n Simple_repeat Simple_repeat 1 285 0 1914 130 0 11 chr5 2078574 2078882 -197551268 - AluSx SINE Alu 0 305 1 1242 183 108 37 chr5 2078883 2079178 -197550972 - MLT2C2 LTR ERVL -146 318 3 241 236 138 41 chr5 2079213 2079336 -197550814 + MLT1J LTR MaLR 277 411 -100 749 119 0 2 chr5 2082861 2083105 -197547045 + AluSx SINE Alu 1 294 -16 476 310 26 0 chr5 2085170 2085325 -197544825 - MER58A DNA MER1_type -23 201 43 1094 129 0 0 chr5 2085586 2085733 -197544417 + AluSg/x SINE Alu 154 300 -12 369 109 0 0 chr5 2085733 2085788 -197544362 + (TA)n Simple_repeat Simple_repeat 1 55 0 38 39 0 0 chr5 2085796 2085848 -197544302 + AT_rich Low_complexity Low_complexity 1 52 0 246 331 57 57 chr5 2085880 2086176 -197543974 - L1MC/D LINE L1 -1944 5864 5569 359 302 75 72 chr5 2086185 2086519 -197543631 - HAL1 LINE L1 -968 1539 1205 231 254 55 18 chr5 2086584 2086694 -197543456 - L1MEd LINE L1 -5059 1060 947 2356 73 0 33 chr5 2086830 2087133 -197543017 + AluSg SINE Alu 1 293 -17 2118 106 3 3 chr5 2087900 2088212 -197541938 - AluSx SINE Alu 0 312 1 239 325 42 16 chr5 2088703 2088894 -197541256 + L1M4 LINE L1 5202 5397 -749 1134 247 47 6 chr5 2089863 2090203 -197539947 - MLT1A1 LTR MaLR 0 365 12 2176 128 6 6 chr5 2090393 2090705 -197539445 + AluSx SINE Alu 1 312 0 2165 123 7 0 chr5 2090922 2091207 -197538943 + AluSx SINE Alu 1 287 -25 22 0 0 0 chr5 2092695 2092717 -197537433 + GC_rich Low_complexity Low_complexity 1 22 0 253 275 0 78 chr5 2093483 2093650 -197536500 + G-rich Low_complexity Low_complexity 3 156 0 284 287 127 45 chr5 2094631 2094875 -197535275 - L1MC4a LINE L1 -1487 6321 6058 1763 154 10 23 chr5 2094898 2095204 -197534946 - AluJo SINE Alu -8 304 3 304 329 87 24 chr5 2096173 2096425 -197533725 - L1MC/D LINE L1 -588 5574 5307 362 254 34 96 chr5 2097698 2097875 -197532275 + MLT1C LTR MaLR 1 166 -224 193 130 0 74 chr5 2098370 2098424 -197531726 + (TTACG)n Simple_repeat Simple_repeat 4 53 0 925 188 96 135 chr5 2100714 2101070 -197529080 - MLT1C LTR MaLR -42 425 7 7197 160 96 8 chr5 2101568 2103292 -197526858 + L1MCa LINE L1 17 1984 -4442 3286 222 31 6 chr5 2103287 2103380 -197526770 + L1MCa LINE L1 3222 3311 -3115 * 2174 130 0 10 chr5 2103380 2103680 -197526470 + AluSx SINE Alu 1 297 -15 3286 222 31 6 chr5 2103680 2104532 -197525618 + L1MCa LINE L1 3311 4190 -2236 703 150 21 21 chr5 2104593 2104733 -197525417 + L1MC1 LINE L1 2043 2182 -4244 4843 187 49 61 chr5 2104745 2107175 -197522975 + L1MC1 LINE L1 4217 8065 0 356 211 21 11 chr5 2109069 2109164 -197520986 + MER53 DNA DNA 23 118 -71 227 286 157 40 chr5 2109178 2109503 -197520647 + MLT1C LTR MaLR 116 478 -71 2203 113 7 3 chr5 2110803 2111103 -197519047 + AluSx SINE Alu 1 301 -11 485 262 167 40 chr5 2111991 2112361 -197517789 + MER31A LTR ERV1 7 427 -39 4886 84 20 55 chr5 2112693 2113409 -197516741 - LTR8 LTR ERV1 0 691 1 544 203 23 16 chr5 2113777 2113905 -197516245 + MER5B DNA MER1_type 1 129 -49 3942 256 64 9 chr5 2114222 2115479 -197514671 - L1MEc LINE L1 -807 5408 4082 3725 261 35 32 chr5 2115477 2117902 -197512248 - L1MEc LINE L1 -2576 3639 1258 * 1370 288 110 0 chr5 2117884 2118384 -197511766 - L1MEc LINE L1 -5555 841 287 * 426 181 96 0 chr5 2118408 2118502 -197511648 - MLT1B LTR MaLR 0 390 288 1826 146 173 19 chr5 2118502 2118873 -197511277 - MSTA LTR MaLR 0 428 1 1543 236 95 31 chr5 2118873 2119547 -197510603 - MER97a DNA MER1_type? -11 883 167 21 36 0 0 chr5 2121046 2121074 -197509076 + AT_rich Low_complexity Low_complexity 1 28 0 272 68 23 0 chr5 2122018 2122062 -197508088 - MADE1 DNA Mariner 0 80 36 344 100 0 0 chr5 2122102 2122152 -197507998 + MADE1 DNA Mariner 31 80 0 27 49 0 0 chr5 2122745 2122786 -197507364 + AT_rich Low_complexity Low_complexity 1 41 0 1998 111 4 4 chr5 2123228 2123499 -197506651 + AluSq SINE Alu 26 296 -17 2160 59 0 0 chr5 2124513 2124768 -197505382 - AluY SINE Alu -3 308 54 349 159 0 133 chr5 2124844 2124957 -197505193 + L1MCa LINE L1 1967 2064 -4362 342 229 0 62 chr5 2124924 2125020 -197505130 - L1MC4 LINE L1 -1339 6703 6614 * 250 312 79 11 chr5 2125021 2125300 -197504850 - L1ME4a LINE L1 -155 5966 5669 1898 174 43 34 chr5 2125307 2125855 -197504295 - MLT2A2 LTR ERVL 0 554 1 2921 217 117 8 chr5 2125869 2126721 -197503429 - L1MB5 LINE L1 0 6174 5231 1770 125 14 7 chr5 2126743 2127023 -197503127 + THE1B LTR MaLR 83 364 0 4664 221 25 29 chr5 2127023 2127347 -197502803 - L1MB5 LINE L1 -907 5239 4915 204 40 0 0 chr5 2127347 2127372 -197502778 + (TTA)n Simple_repeat Simple_repeat 3 27 0 4664 221 25 29 chr5 2127372 2128305 -197501845 - L1MB5 LINE L1 -1231 4915 3987 754 167 8 8 chr5 2331367 2331493 -197298657 + MER49 LTR ERV1 10 135 -788 1516 194 77 119 chr5 2331493 2332074 -197298076 - LTR1B LTR ERV1 0 826 284 249 278 159 20 chr5 2335102 2335253 -197294897 - LTR16B LTR ERVL -4 460 289 603 229 13 0 chr5 2335261 2335499 -197294651 + GA-rich Low_complexity Low_complexity 1 241 0 250 318 122 0 chr5 2336255 2336362 -197293788 + L2 LINE L2 3153 3272 0 580 318 66 3 chr5 2336861 2337147 -197293003 + L1ME3A LINE L1 5548 5851 -319 331 295 0 0 chr5 2338429 2338524 -197291626 + (CA)n Simple_repeat Simple_repeat 2 96 0 411 261 0 0 chr5 2339720 2340131 -197290019 + (TG)n Simple_repeat Simple_repeat 1 411 0 237 237 136 0 chr5 2340905 2340964 -197289186 + L2 LINE L2 3204 3270 -2 196 188 31 0 chr5 2342396 2342460 -197287690 + (TG)n Simple_repeat Simple_repeat 1 66 0 1211 265 131 23 chr5 2342782 2343209 -197286941 + MLT1E LTR MaLR 121 593 0 2070 120 0 3 chr5 2343420 2343728 -197286422 + AluSq SINE Alu 1 307 -6 628 174 14 28 chr5 2343905 2344218 -197285932 + GA-rich Low_complexity Low_complexity 1 308 0 2715 171 37 70 chr5 2345187 2346055 -197284095 - L1MCa LINE L1 -3981 2445 1332 3209 64 5 0 chr5 2346080 2346488 -197283662 - L1PA7 LINE L1 -4 6150 5741 437 311 14 0 chr5 2346549 2346697 -197283453 + Charlie2 DNA MER1_type 2670 2819 -43 2095 90 28 3 chr5 2346703 2346992 -197283158 + AluSc SINE Alu 1 296 -13 2339 123 2 73 chr5 2347453 2347851 -197282299 - L1PA13 LINE L1 -289 5874 5505 1337 148 3 67 chr5 2348493 2348824 -197281326 - AluSx SINE Alu 0 312 3 345 251 11 11 chr5 2349813 2349992 -197280158 + (CA)n Simple_repeat Simple_repeat 1 179 0 340 366 6 0 chr5 2350065 2350281 -197279869 + (CA)n Simple_repeat Simple_repeat 1 217 0 2259 84 3 0 chr5 2350583 2350880 -197279270 + AluSp SINE Alu 1 298 -15 266 268 14 0 chr5 2350881 2350952 -197279198 - MER53 DNA DNA -117 72 1 1546 228 56 18 chr5 2351117 2351564 -197278586 - MLT1C LTR MaLR 0 467 4 2202 93 6 10 chr5 2352367 2352679 -197277471 + AluY SINE Alu 1 311 0 183 204 0 0 chr5 2354538 2354582 -197275568 + (TG)n Simple_repeat Simple_repeat 1 44 0 225 277 59 10 chr5 2354643 2354744 -197275406 + MER88 LTR ERVL 79 184 -280 * 257 337 24 12 chr5 2354655 2354824 -197275326 - MER74B LTR ERVL -74 548 378 236 254 17 0 chr5 2354838 2354897 -197275253 - MER74A LTR ERVL -293 265 206 394 203 0 0 chr5 2355125 2355199 -197274951 + AluJ SINE Alu 49 122 -180 258 171 26 13 chr5 2355199 2355275 -197274875 + (TA)n Simple_repeat Simple_repeat 1 77 0 831 199 0 17 chr5 2355276 2355452 -197274698 + AluJ SINE Alu 125 297 -15 373 365 15 0 chr5 2356385 2356543 -197273607 - MIR SINE MIR -62 146 15 395 345 40 17 chr5 2356752 2356926 -197273224 + MER5B DNA MER1_type 1 178 0 23 78 0 0 chr5 2358727 2358778 -197271372 + AT_rich Low_complexity Low_complexity 1 51 0 22 56 0 0 chr5 2359186 2359222 -197270928 + AT_rich Low_complexity Low_complexity 1 36 0 1733 160 17 3 chr5 2359493 2359787 -197270363 - AluJb SINE Alu -14 298 1 1846 114 66 79 chr5 2360670 2361048 -197269102 - THE1C LTR MaLR -2 373 1 1341 215 48 100 chr5 2361687 2362166 -197267984 + MLT1C LTR MaLR 6 459 -8 1206 174 4 17 chr5 2364253 2364494 -197265656 - L1MA3 LINE L1 0 6305 6068 285 350 17 8 chr5 2365278 2365395 -197264755 - MIR3 SINE MIR -53 155 38 245 73 0 24 chr5 2365504 2365545 -197264605 + (TTTTA)n Simple_repeat Simple_repeat 1 40 0 10103 29 2 0 chr5 2365545 2367476 -197262674 - L1PA3 LINE L1 -24 6131 4199 438 259 51 0 chr5 2370239 2370397 -197259753 - L1M4 LINE L1 -1638 4508 4343 1286 307 77 10 chr5 2371174 2371877 -197258273 + L1M4 LINE L1 3104 3853 -2293 892 185 70 182 chr5 2371877 2372632 -197257518 + MER4A LTR ERV1 1 870 -2 6174 183 25 70 chr5 2372659 2373540 -197256610 + L1MC1 LINE L1 1 920 -5506 258 32 0 0 chr5 2373540 2373571 -197256579 + (CA)n Simple_repeat Simple_repeat 2 32 0 6174 183 25 70 chr5 2373571 2374045 -197256105 + L1MC1 LINE L1 920 1286 -5140 6898 62 9 2 chr5 2374045 2375211 -197254939 + L1PA7 LINE L1 4979 6150 -4 6174 183 25 70 chr5 2375211 2375341 -197254809 + L1MC1 LINE L1 1286 1420 -5006 5036 227 85 42 chr5 2375326 2376124 -197254026 + L1MC1 LINE L1 1685 2446 -3980 * 291 154 19 0 chr5 2376124 2376176 -197253974 + LTR23 LTR ERV1 306 358 -79 5036 227 85 42 chr5 2376176 2378206 -197251944 + L1MC1 LINE L1 2446 4685 -1741 1738 199 55 19 chr5 2378215 2378632 -197251518 + MSTB1 LTR MaLR 1 432 0 2263 66 3 7 chr5 2378661 2378963 -197251187 + AluY SINE Alu 1 301 -10 388 219 0 0 chr5 2378970 2379034 -197251116 + MLT1D LTR MaLR 125 188 -317 4635 156 66 7 chr5 2379079 2379917 -197250233 + ERVL-B3 LTR ERVL 4871 5757 -7 1784 200 15 151 chr5 2379917 2380530 -197249620 + MLT2B3 LTR ERVL 1 408 -36 * 4644 199 79 14 chr5 2380524 2381337 -197248813 + L1MC1 LINE L1 4871 5630 -983 2003 124 48 0 chr5 2381337 2381627 -197248523 + AluSq SINE Alu 1 304 -9 4644 199 79 14 chr5 2381627 2382442 -197247708 + L1MC1 LINE L1 5630 6602 -11 554 255 136 53 chr5 2382446 2382764 -197247386 + L1M4 LINE L1 4067 4441 -1705 2272 89 0 0 chr5 2382764 2383070 -197247080 + AluY SINE Alu 1 306 0 554 255 136 53 chr5 2383070 2383236 -197246914 + L1M4 LINE L1 4441 4592 -1554 1441 76 0 0 chr5 2383623 2383795 -197246355 + AluSg/x SINE Alu 124 295 -17 249 262 16 0 chr5 2384235 2384296 -197245854 + MER45 DNA AcHobo 61 122 -56 942 185 75 5 chr5 2389201 2389401 -197240749 + L1MA4A LINE L1 5555 5768 -535 231 164 0 0 chr5 2389401 2389456 -197240694 - LTR66 LTR ERVL -162 448 394 551 131 0 4 chr5 2389498 2389599 -197240551 - L1MC/D LINE L1 -560 5682 5585 289 0 49 0 chr5 2389604 2389645 -197240505 + (TA)n Simple_repeat Simple_repeat 2 44 0 2266 156 78 11 chr5 2389646 2390120 -197240030 + L1MA4A LINE L1 5795 6300 -3 197 279 114 13 chr5 2391356 2391435 -197238715 + L2 LINE L2 3208 3294 -19 2023 122 3 20 chr5 2392791 2393086 -197237064 - AluSx SINE Alu 0 312 23 366 362 7 7 chr5 2393141 2393279 -197236871 + MER5B DNA MER1_type 35 172 -6 203 322 67 0 chr5 2398446 2398536 -197231614 + L2 LINE L2 3172 3267 -5 182 367 20 10 chr5 2398607 2398705 -197231445 - MIR SINE MIR -6 256 158 243 0 0 0 chr5 2399049 2399076 -197231074 + (TA)n Simple_repeat Simple_repeat 2 28 0 2268 65 65 0 chr5 2400718 2401010 -197229140 + AluY SINE Alu 1 311 0 193 311 77 46 chr5 2402769 2402965 -197227185 - L2 LINE L2 -490 2824 2623 429 343 50 15 chr5 2404013 2404354 -197225796 - HERV16 LTR ERVL -1217 4547 4195 697 294 81 15 chr5 2405020 2405353 -197224797 - HERV16 LTR ERVL -3845 1151 797 216 260 0 0 chr5 2405365 2405415 -197224735 + (TG)n Simple_repeat Simple_repeat 2 51 0 3064 145 19 6 chr5 2406669 2407194 -197222956 - L1MA2 LINE L1 0 6304 5773 1376 241 20 0 chr5 2408303 2408651 -197221499 - MLT1A1 LTR MaLR -2 363 9 2350 110 3 0 chr5 2408685 2408986 -197221164 + AluSp SINE Alu 1 302 -11 2213 113 0 0 chr5 2409226 2409519 -197220631 - AluSx SINE Alu -17 295 3 279 263 11 11 chr5 2410507 2410686 -197219464 + (CA)n Simple_repeat Simple_repeat 1 179 0 337 376 0 0 chr5 2410777 2410955 -197219195 + (CA)n Simple_repeat Simple_repeat 2 179 0 341 278 0 6 chr5 2410987 2411167 -197218983 + (CA)n Simple_repeat Simple_repeat 2 180 0 286 269 13 0 chr5 2411208 2411286 -197218864 + (CA)n Simple_repeat Simple_repeat 1 79 0 226 260 16 0 chr5 2411307 2411434 -197218716 + (CA)n Simple_repeat Simple_repeat 1 129 0 518 226 36 48 chr5 2412183 2412351 -197217799 + MER5A DNA MER1_type 2 167 -22 2019 131 35 26 chr5 2413745 2414089 -197216061 + THE1B LTR MaLR 18 364 0 1741 171 0 46 chr5 2414112 2414439 -197215711 + AluSx SINE Alu 1 312 0 4165 116 4 48 chr5 2415063 2415745 -197214405 + L1PA13 LINE L1 5505 6156 -7 2265 108 3 16 chr5 2415881 2416223 -197213927 - AluSq SINE Alu 0 313 1 257 363 80 55 chr5 2417207 2417496 -197212654 - L2 LINE L2 -1 3271 2976 315 332 87 23 chr5 2417737 2418129 -197212021 - L2 LINE L2 -646 2668 2252 491 266 42 60 chr5 2418272 2418606 -197211544 - MLT1D LTR MaLR -177 328 1 358 231 0 0 chr5 2418784 2418862 -197211288 - MLT1K LTR MaLR -61 527 450 281 218 72 4 chr5 2419517 2419606 -197210544 - MLT1J LTR MaLR -288 189 74 1273 173 35 35 chr5 2421179 2421463 -197208687 + L1MA5 LINE L1 6017 6300 0 957 253 104 20 chr5 2421480 2421836 -197208314 + MLT1C LTR MaLR 80 465 -2 239 274 71 12 chr5 2422542 2422626 -197207524 + L2 LINE L2 3185 3273 -40 258 81 0 0 chr5 2427931 2427968 -197202182 + (CA)n Simple_repeat Simple_repeat 2 38 0 2247 117 3 3 chr5 2429197 2429505 -197200645 - AluSx SINE Alu -4 308 1 234 228 89 41 chr5 2431704 2431827 -197198323 + L1ME4a LINE L1 5992 6120 -1 25 31 0 0 chr5 2432314 2432346 -197197804 + AT_rich Low_complexity Low_complexity 1 32 0 28 0 0 0 chr5 2432379 2432407 -197197743 + AT_rich Low_complexity Low_complexity 1 28 0 24 67 0 0 chr5 2432897 2432942 -197197208 + AT_rich Low_complexity Low_complexity 1 45 0 219 217 22 0 chr5 2434014 2434060 -197196090 - L2 LINE L2 -16 3256 3210 2058 95 32 14 chr5 2434156 2434485 -197195665 + AluSq SINE Alu 5 313 0 24 0 0 0 chr5 2434575 2434599 -197195551 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 2437499 2437521 -197192629 + AT_rich Low_complexity Low_complexity 1 22 0 675 160 0 0 chr5 2438027 2438133 -197192017 - AluSc SINE Alu -6 303 198 1425 94 6 0 chr5 2438133 2438314 -197191836 + AluSc SINE Alu 9 190 -119 233 282 0 24 chr5 2441360 2441445 -197188705 + GA-rich Low_complexity Low_complexity 2 84 0 21 0 0 0 chr5 2441546 2441567 -197188583 + AT_rich Low_complexity Low_complexity 1 21 0 222 91 0 0 chr5 2444249 2444282 -197185868 + (TC)n Simple_repeat Simple_repeat 2 34 0 200 209 23 0 chr5 2447698 2447741 -197182409 + (CAGA)n Simple_repeat Simple_repeat 1 44 0 638 132 48 12 chr5 2447748 2447915 -197182235 + (TAGA)n Simple_repeat Simple_repeat 4 176 0 490 133 31 8 chr5 2447942 2448070 -197182080 + (TAGA)n Simple_repeat Simple_repeat 4 134 0 3016 136 21 14 chr5 2448099 2448615 -197181535 - HSMAR2 DNA Mariner -2 1300 781 247 265 34 17 chr5 2448666 2448783 -197181367 + L1MEd LINE L1 990 1108 -5011 2439 174 31 0 chr5 2449713 2450128 -197180022 - MSTA LTR MaLR 0 428 1 229 294 11 0 chr5 2450924 2451016 -197179134 + L1MEd LINE L1 2833 2925 -3204 25 65 0 0 chr5 2451147 2451193 -197178957 + AT_rich Low_complexity Low_complexity 1 46 0 316 281 81 25 chr5 2451431 2451591 -197178559 - MIR SINE MIR 0 262 94 231 179 26 13 chr5 2451685 2451763 -197178387 + (TA)n Simple_repeat Simple_repeat 1 79 0 316 325 68 16 chr5 2451804 2452053 -197178097 + L1M4 LINE L1 5069 5330 -816 1479 255 3 3 chr5 2452278 2452635 -197177515 + L1PB4 LINE L1 5795 6151 -5 378 228 104 41 chr5 2452685 2452953 -197177197 - L1M4 LINE L1 -3057 3089 2805 * 875 288 18 0 chr5 2452950 2453228 -197176922 - L1ME2 LINE L1 -187 5977 5695 578 214 132 31 chr5 2453344 2453565 -197176585 - Charlie2 DNA MER1_type -106 2756 2490 1926 146 7 7 chr5 2453565 2453866 -197176284 + AluSx SINE Alu 1 301 -11 578 214 132 31 chr5 2453866 2453971 -197176179 - Charlie2 DNA MER1_type -372 2490 2397 410 279 268 4 chr5 2453977 2454246 -197175904 - Charlie2b DNA MER1_type -1748 1034 695 219 167 0 0 chr5 2454277 2454319 -197175831 + (TAGA)n Simple_repeat Simple_repeat 3 44 0 1441 206 62 62 chr5 2454428 2454637 -197175513 - MLT1A2 LTR MaLR 0 374 163 896 167 0 0 chr5 2454637 2454769 -197175381 - FLAM_C SINE Alu -1 132 1 1441 206 62 62 chr5 2454769 2454933 -197175217 - MLT1A2 LTR MaLR -210 164 1 298 282 130 0 chr5 2454937 2455068 -197175082 - Charlie2b DNA MER1_type -2207 575 428 356 360 20 0 chr5 2455099 2455249 -197174901 - Charlie2b DNA MER1_type -2544 318 166 533 232 34 11 chr5 2455250 2455427 -197174723 + L1MEc LINE L1 2168 2348 -4048 292 217 0 0 chr5 2455429 2455489 -197174661 + AluJ/monomer SINE Alu 241 300 -2 737 259 102 32 chr5 2455503 2455877 -197174273 + L1MEc LINE L1 2303 2702 -3513 348 189 90 115 chr5 2455882 2455929 -197174221 - MSTC LTR MaLR -242 123 76 2133 110 7 7 chr5 2455929 2456220 -197173930 - AluSp SINE Alu -22 291 1 348 189 90 115 chr5 2456220 2456294 -197173856 - MSTC LTR MaLR -289 76 5 21 36 0 0 chr5 2458134 2458162 -197171988 + AT_rich Low_complexity Low_complexity 1 28 0 1704 194 42 35 chr5 2458383 2458812 -197171338 - L1 LINE L1 -816 5330 4899 255 252 55 84 chr5 2458812 2459050 -197171100 + MLT1H LTR MaLR 221 451 -98 448 326 57 6 chr5 2459552 2459727 -197170423 + MIR SINE MIR 43 226 -36 1867 144 92 23 chr5 2461223 2461571 -197168579 + THE1C LTR MaLR 1 372 -3 689 164 4 0 chr5 2462090 2462322 -197167828 + (CA)n Simple_repeat Simple_repeat 1 233 0 270 293 140 25 chr5 2462378 2462535 -197167615 - MIR SINE MIR -10 252 78 23 33 0 0 chr5 2463970 2464000 -197166150 + AT_rich Low_complexity Low_complexity 1 30 0 1810 231 25 104 chr5 2464608 2465328 -197164822 + L1ME2 LINE L1 4615 5277 -869 815 212 0 0 chr5 2465337 2465483 -197164667 - FRAM SINE Alu -21 155 10 2229 246 60 29 chr5 2465501 2465989 -197164161 + L1ME2 LINE L1 5282 5804 -360 2849 104 8 8 chr5 2465989 2466364 -197163786 + THE1C LTR MaLR 1 375 0 2229 246 60 29 chr5 2466364 2466646 -197163504 + L1ME2 LINE L1 5804 6076 -88 194 250 40 53 chr5 2470341 2470417 -197159733 + L2 LINE L2 1634 1708 -1606 1578 183 3 13 chr5 2470448 2470775 -197159375 + AluJo SINE Alu 1 312 0 1209 140 5 5 chr5 2471251 2471444 -197158706 - L1PA13 LINE L1 -5 6158 5966 1464 117 2 14 chr5 2471444 2471718 -197158432 + L1PA12 LINE L1 5754 6017 -114 664 315 247 3 chr5 2471755 2472390 -197157760 + L2 LINE L2 2186 2975 -339 353 201 141 67 chr5 2473174 2473323 -197156827 + L1MC4 LINE L1 7688 7847 -195 4774 225 53 39 chr5 2473396 2473961 -197156189 + L1MD1 LINE L1 1136 1692 -4848 1608 174 48 61 chr5 2473961 2474340 -197155810 + MLT1A2 LTR MaLR 1 374 0 4774 225 53 39 chr5 2474340 2475282 -197154868 + L1MD1 LINE L1 1692 2623 -3917 1863 159 6 25 chr5 2475282 2475404 -197154746 + AluSx SINE Alu 1 124 -188 351 0 0 0 chr5 2475404 2475443 -197154707 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 1863 159 6 25 chr5 2475443 2475635 -197154515 + AluSx SINE Alu 124 309 -3 4774 225 53 39 chr5 2475635 2475946 -197154204 + L1MD1 LINE L1 2623 2928 -3612 325 167 0 0 chr5 2475967 2476021 -197154129 - LTR16C LTR ERVL -30 461 408 1444 267 17 8 chr5 2476063 2476538 -197153612 + L1MD1 LINE L1 2959 3437 -3103 1400 243 41 10 chr5 2476531 2476732 -197153418 + L1MD1 LINE L1 5964 6157 -405 * 779 191 0 22 chr5 2476732 2476868 -197153282 + FLAM_C SINE Alu 1 133 0 1400 243 41 10 chr5 2476868 2477073 -197153077 + L1MD1 LINE L1 6157 6380 -182 735 164 37 22 chr5 2477081 2477215 -197152935 + FLAM_C SINE Alu 2 137 -6 453 275 35 7 chr5 2477328 2477470 -197152680 + LTR16C LTR ERVL 316 461 -30 2542 219 9 6 chr5 2477659 2478192 -197151958 - MLT1-int LTR MaLR -835 536 2 21 36 0 0 chr5 2478360 2478388 -197151762 + AT_rich Low_complexity Low_complexity 1 28 0 3064 198 18 36 chr5 2478524 2478700 -197151450 + L1MB3 LINE L1 5446 5624 -559 1575 167 16 46 chr5 2478700 2478835 -197151315 + AluJb SINE Alu 1 138 -174 2024 138 7 0 chr5 2478835 2479132 -197151018 + AluSx SINE Alu 3 301 -11 1575 167 16 46 chr5 2479132 2479301 -197150849 + AluJb SINE Alu 138 296 -16 3064 198 18 36 chr5 2479301 2479797 -197150353 + L1MB3 LINE L1 5624 6106 -77 21 36 0 0 chr5 2480041 2480069 -197150081 + AT_rich Low_complexity Low_complexity 1 28 0 403 279 58 19 chr5 2481257 2481465 -197148685 + MER20 DNA MER1_type 1 216 -3 2498 58 0 29 chr5 2481687 2482000 -197148150 - AluY SINE Alu -7 304 1 499 293 82 47 chr5 2482162 2482650 -197147500 - L2 LINE L2 -208 3064 2556 1879 171 3 0 chr5 2482859 2483158 -197146992 - AluJo SINE Alu -12 300 1 210 71 0 0 chr5 2483681 2483709 -197146441 + (TG)n Simple_repeat Simple_repeat 1 28 0 305 275 58 72 chr5 2483711 2483849 -197146301 - L2 LINE L2 0 3272 3137 488 226 80 0 chr5 2485026 2485163 -197144987 - L1ME1 LINE L1 -65 6101 5954 1490 193 51 10 chr5 2485298 2485594 -197144556 - AluJb SINE Alu -4 308 1 2565 169 55 29 chr5 2485702 2486006 -197144144 + MER7C DNA MER2_type 40 366 -2662 2265 83 0 64 chr5 2486006 2486333 -197143817 - AluSq SINE Alu -7 306 1 2565 169 55 29 chr5 2486333 2486577 -197143573 + MER7C DNA MER2_type 366 602 0 21 0 0 0 chr5 2486818 2486839 -197143311 + AT_rich Low_complexity Low_complexity 1 21 0 1495 268 106 19 chr5 2488471 2489086 -197141064 + L1MCa LINE L1 21 688 -5738 1558 215 95 23 chr5 2491519 2491565 -197138585 - MLT2C2 LTR ERVL -1 463 422 285 98 0 0 chr5 2491565 2491606 -197138544 + (CA)n Simple_repeat Simple_repeat 2 42 0 1558 215 95 23 chr5 2491606 2491991 -197138159 - MLT2C2 LTR ERVL -42 422 1 183 80 0 0 chr5 2492193 2492218 -197137932 + (TG)n Simple_repeat Simple_repeat 2 26 0 1981 156 0 13 chr5 2492964 2493278 -197136872 + AluJb SINE Alu 1 310 -2 33 25 0 0 chr5 2493323 2493363 -197136787 + AT_rich Low_complexity Low_complexity 1 40 0 2759 32 0 0 chr5 2493813 2494121 -197136029 - AluY SINE Alu -3 308 1 27 49 0 0 chr5 2495602 2495643 -197134507 + AT_rich Low_complexity Low_complexity 1 41 0 697 259 49 5 chr5 2496009 2496214 -197133936 - MER20 DNA MER1_type -5 214 1 2149 134 3 0 chr5 2496742 2497049 -197133101 + AluSg SINE Alu 1 308 -2 565 301 75 84 chr5 2497198 2497738 -197132412 + L1MC/D LINE L1 5245 5780 -747 24 32 0 0 chr5 2498011 2498042 -197132108 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr5 2498773 2498794 -197131356 + AT_rich Low_complexity Low_complexity 1 21 0 270 136 0 0 chr5 2498941 2498985 -197131165 + (T)n Simple_repeat Simple_repeat 1 44 0 22 56 0 0 chr5 2499272 2499308 -197130842 + AT_rich Low_complexity Low_complexity 1 36 0 180 158 0 0 chr5 2499521 2499559 -197130591 + (TG)n Simple_repeat Simple_repeat 2 39 0 396 0 0 0 chr5 2501836 2501880 -197128270 + (CA)n Simple_repeat Simple_repeat 2 45 0 672 36 0 0 chr5 2505322 2505405 -197124745 + (TC)n Simple_repeat Simple_repeat 2 84 0 2310 42 0 0 chr5 2507618 2507882 -197122268 + AluY SINE Alu 40 303 -8 1950 169 80 3 chr5 2508119 2508492 -197121658 + MER57A LTR ERV1 2 403 0 2144 122 0 3 chr5 2508640 2508935 -197121215 - AluSq SINE Alu -15 298 5 2655 34 7 0 chr5 2509364 2509662 -197120488 - AluY SINE Alu -11 300 1 24 0 0 0 chr5 2509725 2509749 -197120401 + AT_rich Low_complexity Low_complexity 1 24 0 2023 147 0 10 chr5 2509751 2510064 -197120086 + AluSg SINE Alu 1 310 0 1916 138 56 30 chr5 2510084 2510388 -197119762 + AluJb SINE Alu 1 312 0 1032 70 0 0 chr5 2510558 2510687 -197119463 - AluY SINE Alu -6 305 177 1988 137 0 3 chr5 2511486 2511779 -197118371 + AluJo SINE Alu 14 305 -7 2133 148 0 0 chr5 2511806 2512153 -197117997 + AluSq SINE Alu 1 347 0 182 405 0 0 chr5 2512176 2512250 -197117900 - MIR SINE MIR -12 250 177 219 36 0 0 chr5 2514055 2514083 -197116067 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 492 304 170 37 chr5 2514227 2514685 -197115465 - L2 LINE L2 -365 2949 2431 741 143 24 18 chr5 2516374 2516542 -197113608 + G-rich Low_complexity Low_complexity 2 170 0 205 104 0 42 chr5 2516556 2516604 -197113546 + (GGGGA)n Simple_repeat Simple_repeat 4 49 0 1868 159 10 0 chr5 2520645 2520971 -197109179 - AluSx SINE Alu 0 312 1 1367 230 7 3 chr5 2523063 2523367 -197106783 + MLT1A1 LTR MaLR 1 305 -60 214 169 31 0 chr5 2523544 2523609 -197106541 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 391 313 129 16 chr5 2523609 2523919 -197106231 + HAL1 LINE L1 858 1202 -1305 2175 97 40 3 chr5 2524417 2524716 -197105434 - AluY SINE Alu -1 310 1 288 125 18 0 chr5 2526551 2526607 -197103543 - L1PB2 LINE L1 -3 6148 6092 2243 105 10 0 chr5 2526609 2526903 -197103247 - AluSg SINE Alu -11 299 3 1012 227 122 34 chr5 2528371 2528766 -197101384 + MLT1C LTR MaLR 2 390 0 2326 105 0 0 chr5 2529017 2529312 -197100838 - AluSx SINE Alu -17 295 1 1905 128 7 0 chr5 2530940 2531229 -197098921 + AluSx SINE Alu 1 291 -21 211 68 0 68 chr5 2531232 2531276 -197098874 + (TAAA)n Simple_repeat Simple_repeat 4 44 0 1735 47 5 0 chr5 2531815 2532029 -197098121 + L1PA4 LINE L1 5940 6154 -1 1568 44 0 0 chr5 2532555 2532738 -197097412 + L1PA5 LINE L1 5964 6146 -8 591 276 116 24 chr5 2532788 2533158 -197096992 - MLT1I LTR MaLR -1 408 5 2161 93 7 0 chr5 2533530 2533819 -197096331 - AluSx SINE Alu -21 291 1 2135 139 0 0 chr5 2534590 2534900 -197095250 - AluSx SINE Alu -1 311 2 964 201 126 57 chr5 2534926 2535259 -197094891 + MLT1A1 LTR MaLR 4 359 -6 1678 122 30 19 chr5 2535260 2535531 -197094619 - L1MB2 LINE L1 -41 6130 5857 7849 214 56 19 chr5 2535535 2537033 -197093117 - L1MB2 LINE L1 -631 5552 3946 2221 106 3 0 chr5 2537033 2537335 -197092815 - AluSp SINE Alu -10 303 1 7849 214 56 19 chr5 2537335 2538131 -197092019 - L1MB2 LINE L1 -2237 3946 3181 246 222 32 0 chr5 2538461 2538524 -197091626 + (TCTA)n Simple_repeat Simple_repeat 2 66 0 633 323 69 41 chr5 2538567 2538957 -197091193 - MLT1I LTR MaLR -2 407 7 379 292 169 64 chr5 2539039 2539460 -197090690 + L1ME LINE L1 5272 5736 -430 1426 178 108 93 chr5 2541469 2541604 -197088546 + MLT2C2 LTR ERVL 1 132 -332 843 120 0 24 chr5 2541604 2541729 -197088421 - FLAM_C SINE Alu -11 122 1 1426 178 108 93 chr5 2541729 2541992 -197088158 + MLT2C2 LTR ERVL 132 405 -59 288 120 0 0 chr5 2542039 2542089 -197088061 + (CA)n Simple_repeat Simple_repeat 2 51 0 21 0 0 0 chr5 2543976 2543997 -197086153 + AT_rich Low_complexity Low_complexity 1 21 0 799 205 15 19 chr5 2543997 2544202 -197085948 - L1MA9 LINE L1 -37 6275 6072 259 100 60 0 chr5 2544612 2544662 -197085488 - L1MA9 LINE L1 -241 6071 6019 2713 130 17 9 chr5 2545808 2546230 -197083920 - MSTA LTR MaLR 0 428 4 238 184 102 0 chr5 2546301 2546350 -197083800 + L2 LINE L2 3213 3266 -6 26 88 0 0 chr5 2546938 2547006 -197083144 + AT_rich Low_complexity Low_complexity 1 68 0 378 340 48 14 chr5 2548115 2548262 -197081888 - MIR SINE MIR -4 258 107 25 0 0 0 chr5 2548943 2548968 -197081182 + AT_rich Low_complexity Low_complexity 1 25 0 1794 126 48 0 chr5 2548976 2549268 -197080882 + AluSx SINE Alu 1 305 0 1774 244 125 70 chr5 2549340 2550053 -197080097 + MER21B LTR ERV1 1 752 -111 183 80 0 0 chr5 2550069 2550094 -197080056 + (A)n Simple_repeat Simple_repeat 1 25 0 184 373 63 0 chr5 2550208 2550350 -197079800 + MIR SINE MIR 28 178 -84 359 242 0 11 chr5 2550504 2550595 -197079555 - MLT1A2 LTR MaLR -114 276 187 197 139 23 0 chr5 2550604 2550647 -197079503 + GA-rich Low_complexity Low_complexity 1 44 0 369 209 131 69 chr5 2550652 2550813 -197079337 - MLT1A2 LTR MaLR -217 173 3 5914 118 17 1 chr5 2550860 2552063 -197078087 + L1PA13 LINE L1 4961 6158 -5 1985 129 3 0 chr5 2552063 2552373 -197077777 + AluSx SINE Alu 1 311 -1 248 307 64 21 chr5 2553697 2553837 -197076313 - LTR67 LTR ERVL -4 553 408 1768 141 32 0 chr5 2555255 2555539 -197074611 + AluSx SINE Alu 1 293 -19 294 125 0 0 chr5 2555539 2555587 -197074563 + (GGAA)n Simple_repeat Simple_repeat 1 48 0 1103 119 6 0 chr5 2555589 2555765 -197074385 + (GAAA)n Simple_repeat Simple_repeat 3 179 0 200 278 69 0 chr5 2555846 2555918 -197074232 + MIR3 SINE MIR 115 191 -17 213 65 0 0 chr5 2556114 2556145 -197074005 + (CA)n Simple_repeat Simple_repeat 2 32 0 188 297 16 0 chr5 2556935 2556999 -197073151 + MIR SINE MIR 194 258 -4 660 256 61 17 chr5 2558411 2558734 -197071416 + MER31B LTR ERV1 2 661 0 600 244 31 12 chr5 2559452 2559612 -197070538 - L1MD3 LINE L1 -13 7982 7820 681 261 168 28 chr5 2559635 2559836 -197070314 + L1MC4a LINE L1 7299 7555 -253 1727 188 5 72 chr5 2559836 2560250 -197069900 - MLT1B LTR MaLR -4 386 1 681 261 168 28 chr5 2560250 2560339 -197069811 + L1MC4a LINE L1 7555 7630 -178 2215 110 0 0 chr5 2560351 2560652 -197069498 - AluSg SINE Alu -9 301 1 2492 117 14 0 chr5 2561480 2561839 -197068311 + THE1B LTR MaLR 1 364 0 467 290 134 44 chr5 2561885 2562451 -197067699 - L1ME4a LINE L1 -240 5881 5265 2282 76 0 3 chr5 2562763 2563065 -197067085 - AluY SINE Alu -10 301 1 273 57 0 0 chr5 2564699 2564734 -197065416 + (A)n Simple_repeat Simple_repeat 1 35 0 393 241 52 9 chr5 2566658 2566774 -197063376 + L1MC3 LINE L1 7019 7139 -646 2061 220 70 55 chr5 2566808 2567480 -197062670 + L1MD3 LINE L1 7314 7995 0 1500 149 23 62 chr5 2568118 2568426 -197061724 + AluJb SINE Alu 1 296 -16 568 259 202 3 chr5 2568855 2569226 -197060924 + Charlie2 DNA MER1_type 1886 2330 -532 346 239 128 13 chr5 2569272 2569506 -197060644 + Charlie2 DNA MER1_type 2402 2662 -200 3428 35 2 0 chr5 2569593 2569995 -197060155 - L1PA5 LINE L1 -11 6143 5741 437 311 14 0 chr5 2570056 2570204 -197059946 + Charlie2 DNA MER1_type 2670 2819 -43 2095 90 28 3 chr5 2570210 2570499 -197059651 + AluSc SINE Alu 1 296 -13 29 0 0 0 chr5 2573039 2573068 -197057082 + AT_rich Low_complexity Low_complexity 1 29 0 21 57 0 0 chr5 2576816 2576851 -197053299 + AT_rich Low_complexity Low_complexity 1 35 0 239 212 15 0 chr5 2578057 2578123 -197052027 - L1ME4a LINE L1 -12 6109 6043 213 154 0 0 chr5 2578687 2578726 -197051424 + (CA)n Simple_repeat Simple_repeat 1 39 0 673 210 84 0 chr5 2578837 2579004 -197051146 - L1ME4a LINE L1 -501 5663 5483 315 258 107 67 chr5 2579014 2579239 -197050911 + L1MEd LINE L1 861 1094 -5025 618 156 10 15 chr5 2579242 2579448 -197050702 + (TAGA)n Simple_repeat Simple_repeat 1 205 0 203 197 28 28 chr5 2582374 2582445 -197047705 + (TA)n Simple_repeat Simple_repeat 1 71 0 195 167 0 0 chr5 2582446 2582488 -197047662 + (CA)n Simple_repeat Simple_repeat 1 42 0 435 85 37 0 chr5 2582651 2582733 -197047417 + (CA)n Simple_repeat Simple_repeat 1 85 0 371 106 15 0 chr5 2582878 2582944 -197047206 + (CA)n Simple_repeat Simple_repeat 1 67 0 224 188 38 25 chr5 2583036 2583116 -197047034 + (TA)n Simple_repeat Simple_repeat 1 81 0 306 87 0 0 chr5 2583117 2583163 -197046987 + (CA)n Simple_repeat Simple_repeat 1 46 0 3403 144 44 72 chr5 2583175 2583898 -197046252 - Tigger3b DNA MER2_type 0 1231 529 3363 200 2 0 chr5 2583898 2584543 -197045607 - L1P LINE L1 -1632 4514 3869 635 146 45 0 chr5 2584543 2584649 -197045501 + L1PA13 LINE L1 6034 6148 -15 3419 254 28 7 chr5 2584667 2585595 -197044555 + L1M4 LINE L1 4005 4952 -1194 2295 188 120 12 chr5 2586006 2586496 -197043654 - Tigger3b DNA MER2_type -688 543 1 615 278 78 39 chr5 2586502 2586833 -197043317 - MLT2C1 LTR ERVL -51 346 3 1672 217 30 2 chr5 2590955 2591360 -197038790 - L1MC1 LINE L1 -1 6332 5917 263 170 0 0 chr5 2591360 2591407 -197038743 - MLT2B2 LTR ERVL 0 515 469 702 202 0 0 chr5 2591407 2591585 -197038565 + (CA)n Simple_repeat Simple_repeat 1 178 0 474 251 0 0 chr5 2591597 2591760 -197038390 + (CA)n Simple_repeat Simple_repeat 2 164 0 580 241 77 91 chr5 2591804 2592157 -197037993 - MLT2B2 LTR ERVL -65 349 2 873 239 198 6 chr5 2592211 2592525 -197037625 - MLT1A2 LTR MaLR 0 374 1 1552 220 3 3 chr5 2592547 2592861 -197037289 - L1MC1 LINE L1 -479 5854 5541 1677 79 130 58 chr5 2592941 2593218 -197036932 - AluSp SINE Alu -15 298 2 233 227 0 0 chr5 2594242 2594286 -197035864 + (CCA)n Simple_repeat Simple_repeat 3 46 0 571 232 211 0 chr5 2594296 2594490 -197035660 - MIR SINE MIR -18 244 10 959 246 159 36 chr5 2597115 2597555 -197032595 + MLT1D LTR MaLR 5 498 -7 217 289 96 19 chr5 2597559 2597663 -197032487 - MIR SINE MIR -40 222 111 251 232 0 98 chr5 2599744 2599826 -197030324 - MIR SINE MIR -112 150 77 227 261 43 0 chr5 2600766 2600835 -197029315 - L2 LINE L2 -621 2693 2622 2004 208 42 62 chr5 2602161 2602689 -197027461 - LTR9 LTR ERV1 -95 517 1 659 254 23 17 chr5 2602693 2602870 -197027280 - MLT1A1 LTR MaLR -185 180 3 2052 118 0 9 chr5 2602879 2603194 -197026956 - AluSq SINE Alu -1 312 1 272 222 91 30 chr5 2603212 2603311 -197026839 - MER103 DNA DNA -45 121 17 28 0 0 0 chr5 2603463 2603491 -197026659 + AT_rich Low_complexity Low_complexity 1 28 0 403 218 0 73 chr5 2603509 2603619 -197026531 + MER58 DNA MER1_type 2318 2419 -1 3426 251 85 65 chr5 2604125 2604898 -197025252 + L1ME2 LINE L1 2771 3527 -2637 1396 141 45 0 chr5 2604898 2605118 -197025032 + MER30 DNA MER1_type 1 230 0 3426 251 85 65 chr5 2605118 2605947 -197024203 + L1ME2 LINE L1 3527 4338 -1826 2258 86 7 0 chr5 2605947 2606249 -197023901 + AluSg SINE Alu 1 304 -6 3426 251 85 65 chr5 2606249 2607962 -197022188 + L1ME2 LINE L1 4338 6157 -7 477 0 0 0 chr5 2607962 2608015 -197022135 + (CA)n Simple_repeat Simple_repeat 2 54 0 488 268 94 54 chr5 2609757 2609981 -197020169 + MLT1E LTR MaLR 8 240 -353 1770 250 23 69 chr5 2609988 2610639 -197019511 - MER74B LTR ERVL -1 621 1 930 243 55 16 chr5 2610645 2610900 -197019250 + MLT1E LTR MaLR 329 593 0 213 224 35 17 chr5 2611443 2611501 -197018649 + MIR SINE MIR 108 166 -96 630 322 105 10 chr5 2611513 2611904 -197018246 - MER110 LTR ERV1 -1 490 63 1326 287 58 9 chr5 2612942 2613377 -197016773 - MLT1E2 LTR MaLR 0 626 169 1409 251 90 14 chr5 2613377 2613800 -197016350 + MLT1C LTR MaLR 1 455 -12 528 225 94 7 chr5 2613804 2613942 -197016208 - MLT1E2 LTR MaLR -466 160 11 317 217 169 0 chr5 2613957 2614040 -197016110 - MIR SINE MIR -61 201 105 3489 159 10 26 chr5 2616429 2616864 -197013286 + MER50 LTR ERV1 135 559 -175 2361 83 0 3 chr5 2616864 2617176 -197012974 - AluY SINE Alu 0 311 1 3489 159 10 26 chr5 2617176 2617350 -197012800 + MER50 LTR ERV1 559 734 0 1883 131 14 7 chr5 2619230 2619521 -197010629 + AluSx SINE Alu 3 295 -17 552 30 0 0 chr5 2619521 2619587 -197010563 + (GGAA)n Simple_repeat Simple_repeat 2 67 0 674 243 141 41 chr5 2671173 2671662 -196958488 - MER34 LTR ERV1 0 542 5 2028 76 45 24 chr5 2671724 2672012 -196958138 + AluY SINE Alu 17 310 -1 512 274 85 71 chr5 2672088 2672576 -196957574 - MLT1H LTR MaLR -7 542 1 2269 91 3 0 chr5 2673068 2673364 -196956786 + AluY SINE Alu 1 297 -14 223 246 82 27 chr5 2673744 2673854 -196956296 + L2 LINE L2 1722 1837 -1477 1615 282 63 17 chr5 2673948 2674797 -196955353 - L1ME3 LINE L1 -88 6143 5221 664 301 95 4 chr5 2674851 2674989 -196955161 - L1ME3 LINE L1 -1622 4593 4469 605 268 58 10 chr5 2674989 2675194 -196954956 + MER58C DNA MER1_type 1 215 0 664 301 95 4 chr5 2675194 2675527 -196954623 - L1ME3 LINE L1 -1746 4469 4079 329 172 0 0 chr5 2675563 2675621 -196954529 - Alu SINE Alu -3 299 242 769 177 61 0 chr5 2675621 2675768 -196954382 - L1PA16 LINE L1 -45 6121 5966 * 1316 316 18 15 chr5 2675763 2676438 -196953712 - L1ME3 LINE L1 -2162 4053 3377 485 304 84 24 chr5 2676443 2677423 -196952727 - L1ME3 LINE L1 -4027 2369 1254 435 163 0 0 chr5 2677480 2677560 -196952590 + CT-rich Low_complexity Low_complexity 2 81 0 181 267 0 50 chr5 2679063 2679123 -196951027 + L2 LINE L2 3216 3272 0 186 43 0 0 chr5 2680546 2680569 -196949581 + (CA)n Simple_repeat Simple_repeat 1 23 0 186 237 26 40 chr5 2680604 2680680 -196949470 + MIR SINE MIR 65 139 -69 33 25 0 0 chr5 2681767 2681807 -196948343 + AT_rich Low_complexity Low_complexity 1 40 0 430 292 81 6 chr5 2682629 2682790 -196947360 - MLT1I LTR MaLR -144 265 93 1852 161 137 11 chr5 2682919 2683299 -196946851 + MSTA LTR MaLR 1 428 0 2180 105 10 0 chr5 2684271 2684565 -196945585 - AluSp SINE Alu -16 297 1 2129 99 11 11 chr5 2684565 2684847 -196945303 - AluSx SINE Alu -10 302 21 378 325 113 29 chr5 2686200 2687005 -196943145 - L1M4 LINE L1 -1101 5045 4173 2282 106 7 7 chr5 2688257 2688559 -196941591 - AluSq SINE Alu -11 302 1 259 354 0 0 chr5 2691020 2691119 -196939031 + MIR SINE MIR 140 238 -24 1920 96 44 11 chr5 2691128 2691419 -196938731 + AluY SINE Alu 1 300 0 212 200 20 0 chr5 2692189 2692239 -196937911 + (AATAG)n Simple_repeat Simple_repeat 4 54 0 232 180 73 62 chr5 2692463 2692641 -196937509 + (TG)n Simple_repeat Simple_repeat 1 180 0 461 316 128 47 chr5 2693470 2694038 -196936112 + L1MC4a LINE L1 5025 5634 -755 21 36 0 0 chr5 2694077 2694105 -196936045 + AT_rich Low_complexity Low_complexity 1 28 0 318 335 34 25 chr5 2694176 2694415 -196935735 + L1MC4a LINE L1 5737 5977 -1831 24 32 0 0 chr5 2696144 2696175 -196933975 + AT_rich Low_complexity Low_complexity 1 31 0 180 0 0 0 chr5 2696549 2696569 -196933581 + (T)n Simple_repeat Simple_repeat 1 20 0 1186 220 57 31 chr5 2700355 2700758 -196929392 - MLT1B LTR MaLR -1 373 9 360 197 14 0 chr5 2701081 2701152 -196928998 - MER1B DNA MER1_type -139 158 87 529 200 21 15 chr5 2701564 2701710 -196928440 - MER1B DNA MER1_type -182 115 1 490 312 70 34 chr5 2703167 2703465 -196926685 + MER58B DNA MER1_type 10 318 -23 693 243 101 30 chr5 2703583 2703879 -196926271 - LTR54B LTR ERV1 -2 496 180 189 107 0 0 chr5 2704360 2704388 -196925762 + (CAA)n Simple_repeat Simple_repeat 3 30 0 388 265 5 69 chr5 2705485 2705746 -196924404 + GA-rich Low_complexity Low_complexity 1 244 0 37 99 0 0 chr5 2705966 2706087 -196924063 + AT_rich Low_complexity Low_complexity 1 121 0 664 273 61 63 chr5 2707708 2707850 -196922300 + MLT1C LTR MaLR 43 184 -283 2441 77 0 0 chr5 2707850 2708150 -196922000 + AluY SINE Alu 3 302 -9 664 273 61 63 chr5 2708150 2708417 -196921733 + MLT1C LTR MaLR 184 451 -16 212 371 71 0 chr5 2709489 2709629 -196920521 - MIR SINE MIR -21 241 92 186 43 0 0 chr5 2709996 2710019 -196920131 + (GA)n Simple_repeat Simple_repeat 2 24 0 187 191 128 0 chr5 2711727 2711774 -196918376 + L2 LINE L2 2394 2446 -868 1494 235 37 18 chr5 2712318 2712701 -196917449 + MLT1B LTR MaLR 1 390 0 2325 114 0 9 chr5 2712758 2713073 -196917077 + AluSx SINE Alu 1 312 0 2500 54 0 3 chr5 2713959 2714255 -196915895 - AluY SINE Alu -15 296 2 288 143 0 0 chr5 2714387 2714443 -196915707 + (CCCTAA)n Simple_repeat Simple_repeat 1 56 0 222 62 0 0 chr5 2716713 2716745 -196913405 + (CA)n Simple_repeat Simple_repeat 2 33 0 1069 78 0 48 chr5 2719097 2719263 -196910887 + MER30B DNA MER1_type 23 180 -10 355 244 33 0 chr5 2719585 2719675 -196910475 - MER81 DNA DNA 0 114 22 1309 202 133 22 chr5 2719767 2720182 -196909968 + MLT1C LTR MaLR 7 467 0 1513 118 36 5 chr5 2720623 2720844 -196909306 - MER30 DNA MER1_type 0 230 3 708 145 90 24 chr5 2721196 2721353 -196908797 - MLT2C1 LTR ERVL -40 480 199 22 35 0 0 chr5 2722290 2722319 -196907831 + AT_rich Low_complexity Low_complexity 1 29 0 29 47 0 0 chr5 2722415 2722458 -196907692 + AT_rich Low_complexity Low_complexity 1 43 0 189 0 0 0 chr5 2723589 2723610 -196906540 + (ATTG)n Simple_repeat Simple_repeat 2 22 0 4859 216 33 48 chr5 2724466 2726023 -196904127 + Looper DNA T2_type 1 1534 -24 324 0 0 0 chr5 2726024 2726060 -196904090 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 1741 215 146 30 chr5 2726071 2726537 -196903613 - MLT2B1 LTR ERVL 0 520 1 188 200 17 0 chr5 2726906 2726966 -196903184 + GA-rich Low_complexity Low_complexity 2 62 0 360 245 31 10 chr5 2728034 2728132 -196902018 + MER69 DNA AcHobo 41 140 -2386 189 0 0 0 chr5 2728601 2728622 -196901528 + (T)n Simple_repeat Simple_repeat 1 21 0 727 265 71 36 chr5 2729105 2729497 -196900653 + MLT1C LTR MaLR 60 465 -2 3943 116 20 3 chr5 2731121 2731725 -196898425 - L1PA13 LINE L1 -4 6159 5546 21 0 0 0 chr5 2731823 2731844 -196898306 + AT_rich Low_complexity Low_complexity 1 21 0 492 152 0 103 chr5 2732407 2732552 -196897598 + MER96B DNA MER1_type? 238 367 -50 309 300 0 42 chr5 2733334 2733454 -196896696 - L2 LINE L2 -2 3311 3197 2151 139 0 7 chr5 2733745 2734055 -196896095 + AluSx SINE Alu 1 308 -4 306 182 106 15 chr5 2734508 2734574 -196895576 + MIR3 SINE MIR 110 181 -27 707 197 34 11 chr5 2735111 2735289 -196894861 + MER96B DNA MER1_type? 2 183 -234 1608 196 68 46 chr5 2735893 2736346 -196893804 - MER31B LTR ERV1 0 466 4 210 341 57 48 chr5 2737485 2737714 -196892436 - L2 LINE L2 -638 2676 2446 23 0 0 0 chr5 2737786 2737809 -196892341 + AT_rich Low_complexity Low_complexity 1 23 0 540 323 72 26 chr5 2737809 2738224 -196891926 + L1MC/D LINE L1 4160 4593 -1553 433 327 92 58 chr5 2739155 2739656 -196890494 + L1MC/D LINE L1 5307 5824 -1984 26 64 0 0 chr5 2740471 2740518 -196889632 + AT_rich Low_complexity Low_complexity 1 47 0 803 244 117 7 chr5 2740631 2740938 -196889212 - MER2 DNA MER2_type -3 341 1 237 148 140 0 chr5 2740941 2741008 -196889142 + MIR SINE MIR 53 141 -67 22 0 0 0 chr5 2741154 2741176 -196888974 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr5 2741327 2741355 -196888795 + AT_rich Low_complexity Low_complexity 1 28 0 1831 23 5 0 chr5 2741866 2742083 -196888067 - L1PA4 LINE L1 0 6155 5938 202 265 0 0 chr5 2743250 2743299 -196886851 + GA-rich Low_complexity Low_complexity 1 49 0 1178 251 28 3 chr5 2743894 2744257 -196885893 - L1MB1 LINE L1 0 6168 5798 360 258 118 39 chr5 2745211 2745389 -196884761 - L3 LINE CR1 -231 1346 1155 222 216 0 20 chr5 2748101 2748152 -196881998 - L2 LINE L2 -2 3311 3262 320 319 35 0 chr5 2749823 2749939 -196880211 - MIR SINE MIR -108 154 35 255 312 51 13 chr5 2750956 2751113 -196879037 + MER103 DNA DNA 2 164 -2 466 222 31 8 chr5 2751272 2751446 -196878704 + MER61B LTR ERV1 1 105 -320 1412 179 36 11 chr5 2751516 2751795 -196878355 + MER61D LTR ERV1 216 501 0 1864 119 141 28 chr5 2752747 2753074 -196877076 + THE1B LTR MaLR 1 364 0 1654 215 74 17 chr5 2754754 2755172 -196874978 + MLT2B1 LTR ERVL 1 442 -78 1583 287 20 33 chr5 2756540 2757139 -196873011 + L1M2b LINE L1 14 604 -6605 594 241 48 35 chr5 2757337 2757547 -196872603 + L1M2b LINE L1 1685 1881 -5328 3695 210 16 47 chr5 2757683 2758958 -196871192 + L1M2b LINE L1 2162 3396 -3812 806 185 0 0 chr5 2758961 2759107 -196871043 + Tigger1 DNA MER2_type 1 146 -2272 1090 172 5 18 chr5 2759107 2759328 -196870822 + Tigger1 DNA MER2_type 2201 2418 0 9951 193 27 5 chr5 2759331 2761631 -196868519 + L1M2b LINE L1 3406 5757 -1451 864 177 43 22 chr5 2761634 2761866 -196868284 + L1MA5 LINE L1 3972 4208 -3000 573 135 10 0 chr5 2761856 2761960 -196868190 + L1MA5 LINE L1 5753 5857 -1351 * 5087 169 21 24 chr5 2761940 2763515 -196866635 + L1MA5 LINE L1 5789 7357 -5 1383 124 44 26 chr5 2763928 2764154 -196865996 - MER30 DNA MER1_type 0 230 1 2114 146 7 3 chr5 2764514 2764823 -196865327 + AluSx SINE Alu 3 312 0 21 0 0 0 chr5 2766792 2766813 -196863337 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 2766897 2766918 -196863232 + AT_rich Low_complexity Low_complexity 1 21 0 634 305 72 90 chr5 2768866 2769688 -196860462 + L1MDa LINE L1 1236 2042 -4498 9340 104 2 3 chr5 2769872 2772031 -196858119 + L1PA8 LINE L1 4014 6172 0 428 266 62 41 chr5 2772168 2772382 -196857768 + L1MDa LINE L1 2537 2760 -3780 866 94 78 0 chr5 2772382 2772510 -196857640 - MER85 DNA T2_type -1 138 1 428 266 62 41 chr5 2772510 2772585 -196857565 + L1MDa LINE L1 2760 2832 -3708 249 296 19 0 chr5 2772594 2772702 -196857448 - L1M4 LINE L1 -3570 2576 2467 406 264 111 0 chr5 2772838 2773046 -196857104 + L1MDa LINE L1 3176 3406 -3134 1466 160 33 4 chr5 2773048 2773323 -196856827 + L1PA16 LINE L1 5869 6151 -15 866 81 8 0 chr5 2773335 2773458 -196856692 - L1PB1 LINE L1 0 6151 6028 3644 256 79 51 chr5 2773547 2776241 -196853909 - L1M4 LINE L1 -554 5866 3030 1737 178 3 0 chr5 2776241 2776527 -196853623 - AluJb SINE Alu -22 290 4 3644 256 79 51 chr5 2776527 2776795 -196853355 - L1M4 LINE L1 -3390 3030 2771 279 173 0 0 chr5 2776819 2776871 -196853279 - L1MB8 LINE L1 -12 6166 6115 1139 154 125 38 chr5 2776872 2777112 -196853038 - Tigger2 DNA MER2_type -173 2545 1 3464 171 75 8 chr5 2777112 2777861 -196852289 - L1MB7 LINE L1 -86 6098 5300 764 251 137 57 chr5 2777828 2778479 -196851671 - L1M4c LINE L1 -3602 2780 2183 * 3788 60 6 2 chr5 2778479 2778947 -196851203 - L1PA5 LINE L1 -7 6147 5678 764 251 137 57 chr5 2778947 2779435 -196850715 - L1M4c LINE L1 -4199 2183 1455 2224 120 0 0 chr5 2780179 2780479 -196849671 - AluSx SINE Alu -12 300 1 2087 123 7 13 chr5 2781237 2781538 -196848612 - AluSg SINE Alu -11 299 1 421 284 125 85 chr5 2782315 2782772 -196847378 - MLT1H LTR MaLR -2 547 73 357 231 0 66 chr5 2782910 2783001 -196847149 - L2 LINE L2 0 3313 3229 183 271 17 0 chr5 2784502 2784561 -196845589 - MIR SINE MIR -66 142 83 254 230 0 23 chr5 2784773 2784860 -196845290 + (CATA)n Simple_repeat Simple_repeat 2 86 0 451 262 21 35 chr5 2786122 2786263 -196843887 + MLT1I LTR MaLR 247 385 -24 493 273 83 46 chr5 2786442 2787214 -196842936 + L1MEc LINE L1 2131 2893 -3322 358 182 0 0 chr5 2787245 2787300 -196842850 + Tigger5 DNA MER2_type 1 55 -2268 318 173 13 53 chr5 2787269 2787344 -196842806 + Tigger5 DNA MER2_type 2251 2322 -1 * 238 198 40 69 chr5 2787361 2787462 -196842688 + L1MEc LINE L1 2924 3021 -3194 202 303 174 0 chr5 2787462 2787594 -196842556 - MIR SINE MIR -12 250 96 2686 33 0 3 chr5 2787682 2787989 -196842161 + AluY SINE Alu 1 306 -5 596 264 45 80 chr5 2787999 2788571 -196841579 + L1MEc LINE L1 3469 4020 -2195 35 24 0 0 chr5 2788574 2788616 -196841534 + AT_rich Low_complexity Low_complexity 1 42 0 591 245 54 0 chr5 2788657 2788804 -196841346 + MLT1D LTR MaLR 1 155 -350 976 211 18 22 chr5 2788871 2789094 -196841056 + MLT1D LTR MaLR 271 492 -13 1964 133 7 4 chr5 2789552 2789831 -196840319 + AluSq SINE Alu 1 280 -33 267 31 0 0 chr5 2789831 2789863 -196840287 + (CA)n Simple_repeat Simple_repeat 1 32 0 31 0 0 0 chr5 2790504 2790535 -196839615 + AT_rich Low_complexity Low_complexity 1 31 0 220 386 59 5 chr5 2791217 2791419 -196838731 + MIR SINE MIR 22 234 -28 235 225 33 42 chr5 2791470 2791590 -196838560 + (TATATG)n Simple_repeat Simple_repeat 6 124 0 237 268 28 0 chr5 2791806 2791877 -196838273 + CT-rich Low_complexity Low_complexity 3 75 0 2638 189 34 55 chr5 2791974 2792536 -196837614 - MER52A LTR ERV1 0 1755 1206 1286 227 88 65 chr5 2792509 2792998 -196837152 - MER52A LTR ERV1 -304 1349 531 * 307 264 172 0 chr5 2793022 2793109 -196837041 - MER52A LTR ERV1 -671 1084 983 518 219 233 7 chr5 2793126 2793272 -196836878 - MER52A LTR ERV1 -664 1091 913 3620 198 89 28 chr5 2793340 2794293 -196835857 - MER52A LTR ERV1 -658 1097 1 4138 149 17 8 chr5 2795829 2796534 -196833616 + MER50 LTR ERV1 1 711 -23 717 204 0 0 chr5 2797562 2797714 -196832436 + T-rich Low_complexity Low_complexity 1 152 0 2275 115 3 3 chr5 2797718 2798031 -196832119 - AluSq SINE Alu 0 313 1 22 0 0 0 chr5 2799294 2799316 -196830834 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr5 2800465 2800485 -196829665 + (CCCCCT)n Simple_repeat Simple_repeat 2 21 0 641 244 0 0 chr5 2801222 2801398 -196828752 + (CTGGGG)n Simple_repeat Simple_repeat 5 180 0 615 241 0 0 chr5 2801465 2801639 -196828511 + (CTGGGG)n Simple_repeat Simple_repeat 3 176 0 584 258 0 0 chr5 2801659 2801837 -196828313 + (CTGGGG)n Simple_repeat Simple_repeat 3 180 0 569 274 6 0 chr5 2801849 2802201 -196827949 + (CTGGGG)n Simple_repeat Simple_repeat 1 354 0 1979 150 7 0 chr5 2803462 2803768 -196826382 - AluSx SINE Alu -4 308 1 28 61 0 0 chr5 2804515 2804564 -196825586 + AT_rich Low_complexity Low_complexity 1 49 0 1297 214 64 113 chr5 2806177 2806691 -196823459 - MLT1E LTR MaLR -4 589 75 2225 125 0 0 chr5 2807311 2807623 -196822527 - AluSx SINE Alu 0 312 1 284 307 83 43 chr5 2807676 2807930 -196822220 + L1MC/D LINE L1 5476 5739 -382 182 132 53 0 chr5 2808423 2808461 -196821689 + CT-rich Low_complexity Low_complexity 1 40 0 266 176 20 0 chr5 2809783 2809834 -196820316 + LTR30 LTR ERV1 1 52 -670 1253 91 37 118 chr5 2809834 2810098 -196820052 + LTR12 LTR ERV1 57 258 -456 305 291 26 0 chr5 2810098 2810215 -196819935 + LTR30 LTR ERV1 524 643 -79 2526 84 0 0 chr5 2810215 2810537 -196819613 + LTR12 LTR ERV1 377 698 -16 1223 177 101 122 chr5 2810541 2810976 -196819174 + MSTA LTR MaLR 3 428 0 533 249 80 127 chr5 2811673 2812075 -196818075 + MLT1C LTR MaLR 1 464 -3 203 256 0 44 chr5 2814184 2814274 -196815876 + (TA)n Simple_repeat Simple_repeat 2 87 0 213 121 0 0 chr5 2815130 2815163 -196814987 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 495 0 0 0 chr5 2817262 2817317 -196812833 + (TA)n Simple_repeat Simple_repeat 1 55 0 2149 111 0 0 chr5 2817316 2817617 -196812533 - AluSg SINE Alu 0 301 1 28 48 0 0 chr5 2817811 2817853 -196812297 + AT_rich Low_complexity Low_complexity 1 42 0 1673 182 88 45 chr5 2818112 2818579 -196811571 + MLT2B1 LTR ERVL 1 487 -33 1791 214 86 34 chr5 2820608 2821132 -196809018 + L1MB7 LINE L1 5634 6184 0 291 365 58 12 chr5 2821475 2821716 -196808434 + MIR SINE MIR 8 259 -3 264 363 7 15 chr5 2822660 2822795 -196807355 + MIR SINE MIR 84 217 -45 2069 112 22 0 chr5 2824286 2824562 -196805588 + AluSg SINE Alu 13 294 -16 3368 224 35 33 chr5 2824779 2825093 -196805057 - L1MB8 LINE L1 -7 6171 5859 2308 101 7 0 chr5 2825093 2825399 -196804751 - AluSx SINE Alu -2 310 3 3368 224 35 33 chr5 2825399 2825962 -196804188 - L1MB8 LINE L1 -319 5859 5298 1930 192 78 2 chr5 2825962 2826358 -196803792 + MSTB LTR MaLR 1 426 0 3368 224 35 33 chr5 2826358 2826893 -196803257 - L1MB8 LINE L1 -880 5298 4747 2472 71 0 7 chr5 2826893 2827203 -196802947 - AluY SINE Alu -3 308 1 3368 224 35 33 chr5 2827203 2827320 -196802830 - L1MB8 LINE L1 -1431 4747 4632 1851 64 0 0 chr5 2827420 2827638 -196802512 + AluY SINE Alu 67 284 -27 217 86 0 0 chr5 2827638 2827673 -196802477 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 32 43 0 0 chr5 2827872 2827918 -196802232 + AT_rich Low_complexity Low_complexity 1 46 0 1524 269 69 18 chr5 2827957 2828563 -196801587 + L1ME2 LINE L1 5291 5927 -237 4666 147 14 13 chr5 2829209 2829985 -196800165 + Tigger1 DNA MER2_type 123 899 -1519 1043 128 24 0 chr5 2830085 2830249 -196799901 + AluSp SINE Alu 103 270 -43 276 77 0 0 chr5 2830252 2830291 -196799859 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 753 321 69 53 chr5 2830375 2830955 -196799195 - L1MC4a LINE L1 -1795 6013 5425 974 232 70 35 chr5 2830980 2831325 -196798825 + MER74B LTR ERVL 261 617 -5 926 236 16 64 chr5 2831328 2831777 -196798373 - L1MC4a LINE L1 -717 5449 5024 226 132 0 26 chr5 2832084 2832122 -196798028 + MLT1L LTR MaLR 579 615 0 192 283 22 0 chr5 2832260 2832306 -196797844 + L2 LINE L2 3267 3313 0 1006 156 0 118 chr5 2833364 2833601 -196796549 - AluJb SINE Alu -19 293 85 2297 248 64 90 chr5 2833994 2834156 -196795994 - L1MC4a LINE L1 -1127 5019 4854 409 159 16 0 chr5 2834156 2834249 -196795901 - AluJ/FRAM SINE Alu 0 314 221 2297 248 64 90 chr5 2834249 2835379 -196794771 - L1MC4a LINE L1 -1292 4854 3699 2303 244 74 53 chr5 2835399 2835646 -196794504 + L1M4 LINE L1 3797 4037 -2109 1942 119 0 14 chr5 2835646 2835981 -196794169 + AluSp SINE Alu 1 331 0 2303 244 74 53 chr5 2835981 2836831 -196793319 + L1M4 LINE L1 4037 4919 -1227 273 298 65 52 chr5 2839359 2839385 -196790765 + HAL1 LINE L1 2254 2278 -229 189 0 0 0 chr5 2839385 2839406 -196790744 + (TTAA)n Simple_repeat Simple_repeat 3 23 0 273 298 65 52 chr5 2839406 2839627 -196790523 + HAL1 LINE L1 2278 2504 -3 231 184 53 13 chr5 2839700 2839776 -196790374 + CT-rich Low_complexity Low_complexity 1 79 0 1081 209 17 120 chr5 2841100 2841507 -196788643 - MLT1A1 LTR MaLR 0 365 1 502 233 194 30 chr5 2841538 2841770 -196788380 + MER5C DNA MER1_type 55 324 0 22 0 0 0 chr5 2842885 2842907 -196787243 + AT_rich Low_complexity Low_complexity 1 22 0 359 276 155 0 chr5 2845241 2845357 -196784793 - MIR SINE MIR -11 251 118 641 149 0 8 chr5 2848197 2848331 -196781819 + (TTCC)n Simple_repeat Simple_repeat 3 135 0 5621 155 21 25 chr5 2848427 2849536 -196780614 - L1MA7 LINE L1 0 6291 5188 5009 172 19 4 chr5 2849529 2850499 -196779651 + L1MA7 LINE L1 4202 5185 -961 * 232 218 35 81 chr5 2852393 2852480 -196777670 + L1ME4a LINE L1 5652 5734 -2074 1878 211 0 0 chr5 2853974 2854320 -196775830 - MER7A DNA MER2_type -1 345 2 2100 93 0 0 chr5 2854421 2854701 -196775449 + AluSx SINE Alu 33 312 0 297 0 0 0 chr5 2854986 2855019 -196775131 + (CA)n Simple_repeat Simple_repeat 2 34 0 25 0 0 0 chr5 2855331 2855356 -196774794 + AT_rich Low_complexity Low_complexity 1 25 0 208 298 18 0 chr5 2858257 2858314 -196771836 + CT-rich Low_complexity Low_complexity 6 63 0 686 309 75 10 chr5 2858924 2859219 -196770931 - L3 LINE CR1 -622 955 642 858 190 0 118 chr5 2859754 2859991 -196770159 - AluJb SINE Alu -19 293 85 180 0 0 0 chr5 2860393 2860413 -196769737 + (TCTG)n Simple_repeat Simple_repeat 3 22 0 288 0 0 0 chr5 2861664 2861696 -196768454 + (TG)n Simple_repeat Simple_repeat 2 33 0 1957 132 0 0 chr5 2863867 2864168 -196765982 - AluSg SINE Alu 0 301 1 24 0 0 0 chr5 2865836 2865860 -196764290 + AT_rich Low_complexity Low_complexity 1 24 0 470 355 52 66 chr5 2865987 2866314 -196763836 + L1MC4a LINE L1 4296 4626 -1520 2148 58 0 11 chr5 2866314 2866588 -196763562 - AluY SINE Alu -40 271 1 470 355 52 66 chr5 2866588 2867142 -196763008 + L1MC4a LINE L1 4626 5165 -981 243 250 8 48 chr5 2867278 2867402 -196762748 + L1MC4a LINE L1 5296 5397 -962 912 230 139 39 chr5 2867575 2868017 -196762133 + MLT1D LTR MaLR 1 378 -12 315 250 40 92 chr5 2868295 2868447 -196761703 + L1MC4a LINE L1 6121 6264 -1544 347 261 69 64 chr5 2868533 2868721 -196761429 + L1ME4a LINE L1 5933 6121 0 23 33 0 0 chr5 2869999 2870029 -196760121 + AT_rich Low_complexity Low_complexity 1 30 0 201 119 24 24 chr5 2871588 2871630 -196758520 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 290 80 60 0 chr5 2871632 2871682 -196758468 - L1MA4 LINE L1 -5 6295 6243 3102 38 0 0 chr5 2871925 2872293 -196757857 - L1PA4 LINE L1 -3 6152 5785 287 242 39 70 chr5 2873305 2873433 -196756717 - LTR16C LTR ERVL -2 489 366 1065 39 0 0 chr5 2876798 2876926 -196753224 + L1PA4 LINE L1 6028 6155 0 614 242 78 47 chr5 2880501 2880895 -196749255 - MLT1C LTR MaLR 0 458 5 1182 214 117 35 chr5 2882677 2882994 -196747156 + MER2 DNA MER2_type 1 343 -1 273 332 124 31 chr5 2883227 2883453 -196746697 - L3 LINE CR1 -1050 527 281 339 312 53 72 chr5 2883499 2883762 -196746388 - MIR SINE MIR -3 259 2 2457 85 0 0 chr5 2888422 2888717 -196741433 - AluSg SINE Alu -15 295 1 21 0 0 0 chr5 2888725 2888746 -196741404 + AT_rich Low_complexity Low_complexity 1 21 0 2219 84 19 22 chr5 2889346 2889657 -196740493 - AluSq SINE Alu -3 310 1 23 0 0 0 chr5 2889692 2889715 -196740435 + AT_rich Low_complexity Low_complexity 1 23 0 2204 133 0 0 chr5 2890871 2891171 -196738979 + AluSq SINE Alu 1 300 -13 595 257 60 6 chr5 2891353 2891536 -196738614 + MIR SINE MIR 67 259 -3 669 232 46 66 chr5 2892204 2892463 -196737687 - MLT1C LTR MaLR 0 467 214 1724 196 33 53 chr5 2892686 2893003 -196737147 + MER65A LTR ERV1 1 308 -137 6222 75 0 1 chr5 2893003 2893831 -196736319 + L1PA7 LINE L1 5346 6154 0 1724 196 33 53 chr5 2893831 2893967 -196736183 + MER65A LTR ERV1 308 445 0 1760 183 36 25 chr5 2895467 2895828 -196734322 - MLT1A1 LTR MaLR 0 365 1 2283 98 0 3 chr5 2895979 2896276 -196733874 + AluSg SINE Alu 1 296 -14 1606 155 66 7 chr5 2896424 2896695 -196733455 + AluJo SINE Alu 7 293 -19 1918 139 28 0 chr5 2899704 2899992 -196730158 - AluSx SINE Alu -16 296 1 228 196 0 20 chr5 2901758 2901809 -196728341 + (TTTA)n Simple_repeat Simple_repeat 1 50 0 2146 114 20 0 chr5 2902199 2902497 -196727653 + AluSx SINE Alu 1 304 -8 202 209 0 0 chr5 2902629 2902672 -196727478 + (CA)n Simple_repeat Simple_repeat 2 44 0 385 181 44 0 chr5 2905757 2905858 -196724292 + L1M4 LINE L1 1024 1275 -5271 24 53 0 0 chr5 2905931 2905969 -196724181 + AT_rich Low_complexity Low_complexity 1 38 0 399 277 80 40 chr5 2906053 2906277 -196723873 + L1ME LINE L1 5590 5822 -299 532 269 83 65 chr5 2906292 2907038 -196723112 + L1M4 LINE L1 1389 2360 -4465 4958 262 58 30 chr5 2907039 2908066 -196722084 + L1M4 LINE L1 2384 3381 -3263 1780 168 28 0 chr5 2908066 2908351 -196721799 - AluJb SINE Alu -18 294 2 4958 262 58 30 chr5 2908351 2909593 -196720557 + L1M4 LINE L1 3381 4686 -1958 2074 253 62 37 chr5 2909713 2910962 -196719188 + L1M4 LINE L1 4930 6222 -440 318 295 103 46 chr5 2911202 2911504 -196718646 + L1M4 LINE L1 2411 2729 -3653 453 194 136 99 chr5 2911688 2911930 -196718220 - MLT1F1 LTR MaLR -209 358 108 496 141 202 10 chr5 2912094 2912193 -196717957 - Tigger1 DNA MER2_type 0 2418 2301 900 181 66 6 chr5 2913389 2913571 -196716579 + MER58 DNA MER1_type 1 193 -148 2184 102 3 10 chr5 2913598 2913893 -196716257 + AluY SINE Alu 1 293 -18 7384 127 23 6 chr5 2913893 2915056 -196715094 - Tigger1 DNA MER2_type -109 2309 1127 1083 223 48 53 chr5 2915156 2915533 -196714617 + MLT1C LTR MaLR 77 451 -16 548 276 65 5 chr5 2915834 2916033 -196714117 - MLT1J LTR MaLR -246 265 55 1519 134 0 0 chr5 2916521 2916737 -196713413 - AluSg/x SINE Alu -1 309 94 236 324 76 34 chr5 2916955 2917217 -196712933 - L1ME LINE L1 -302 5819 5547 1245 204 106 23 chr5 2918311 2918659 -196711491 + MLT1B LTR MaLR 6 382 -8 548 232 132 32 chr5 2919196 2919416 -196710734 + MLT1C LTR MaLR 6 247 -220 1057 202 51 14 chr5 2920543 2920925 -196709225 - MLT1B LTR MaLR -38 352 2 2256 105 0 3 chr5 2920994 2921345 -196708805 + AluSg SINE Alu 1 350 0 1024 174 9 19 chr5 2922397 2922609 -196707541 + L1MA4 LINE L1 6091 6300 0 453 292 97 36 chr5 2922609 2923148 -196707002 + L1MC/D LINE L1 951 1504 -4625 29 47 0 0 chr5 2923374 2923417 -196706733 + AT_rich Low_complexity Low_complexity 1 43 0 297 323 143 37 chr5 2923874 2924179 -196705971 + L1MC/D LINE L1 3457 3818 -2311 2248 99 0 0 chr5 2924179 2924495 -196705655 - AluSx SINE Alu 0 318 3 297 323 143 37 chr5 2924495 2924594 -196705556 + L1MC/D LINE L1 3818 3905 -2224 * 686 252 38 24 chr5 2924581 2924791 -196705359 + L1MD3 LINE L1 7783 7995 0 455 291 166 32 chr5 2924788 2925228 -196704922 + HAL1 LINE L1 1553 2051 -456 * 21 0 0 0 chr5 2925823 2925844 -196704306 + AT_rich Low_complexity Low_complexity 1 21 0 425 308 74 8 chr5 2925953 2926213 -196703937 + L1MC/D LINE L1 5197 5471 -743 717 235 54 0 chr5 2926315 2926519 -196703631 - L1ME3 LINE L1 0 6162 5948 499 197 0 26 chr5 2926641 2926758 -196703392 + L1MB8 LINE L1 6064 6177 -1 1748 212 54 32 chr5 2926797 2927929 -196702221 - L1ME3 LINE L1 -608 5751 4618 231 342 13 0 chr5 2928064 2928143 -196702007 - L2 LINE L2 0 3272 3193 214 349 0 0 chr5 2928502 2928568 -196701582 - L2 LINE L2 0 3313 3248 1309 220 39 62 chr5 2928937 2929373 -196700777 - MSTB LTR MaLR 0 426 1 23 0 0 0 chr5 2931107 2931130 -196699020 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr5 2933423 2933452 -196696698 + GC_rich Low_complexity Low_complexity 1 29 0 297 237 8 42 chr5 2936488 2936667 -196693483 + G-rich Low_complexity Low_complexity 1 172 0 248 275 0 0 chr5 2936738 2936807 -196693343 + C-rich Low_complexity Low_complexity 2 70 0 200 111 28 0 chr5 2937007 2937043 -196693107 + (CCG)n Simple_repeat Simple_repeat 2 38 0 39 100 0 0 chr5 2937070 2937200 -196692950 + GC_rich Low_complexity Low_complexity 1 130 0 192 40 0 0 chr5 2937410 2937435 -196692715 + (CCG)n Simple_repeat Simple_repeat 1 25 0 21 0 0 0 chr5 2937530 2937551 -196692599 + GC_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr5 2937659 2937690 -196692460 + GC_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr5 2939798 2939826 -196690324 + GC_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 2939860 2939881 -196690269 + GC_rich Low_complexity Low_complexity 1 21 0 28 61 0 0 chr5 2939943 2939992 -196690158 + GC_rich Low_complexity Low_complexity 1 49 0 27 0 0 0 chr5 2940275 2940302 -196689848 + GC_rich Low_complexity Low_complexity 1 27 0 359 164 0 16 chr5 2941287 2941348 -196688802 + L1MC4 LINE L1 6644 6703 -1339 208 162 27 0 chr5 2941349 2941386 -196688764 + (TATATG)n Simple_repeat Simple_repeat 6 43 0 198 0 0 0 chr5 2941850 2941872 -196688278 + (A)n Simple_repeat Simple_repeat 1 22 0 450 0 0 0 chr5 2944498 2944548 -196685602 + (CA)n Simple_repeat Simple_repeat 2 51 0 21 57 0 0 chr5 2945068 2945103 -196685047 + GC_rich Low_complexity Low_complexity 1 35 0 23 54 0 0 chr5 2945232 2945269 -196684881 + GC_rich Low_complexity Low_complexity 1 37 0 26 50 0 0 chr5 2945992 2946032 -196684118 + AT_rich Low_complexity Low_complexity 1 40 0 1024 225 61 58 chr5 2951606 2952259 -196677891 - Zaphod DNA AcHobo -20 4011 736 921 140 136 9 chr5 2952968 2953189 -196676961 - L1MC2 LINE L1 0 6344 6096 259 224 0 15 chr5 2953382 2953449 -196676701 - MER53 DNA DNA -120 69 4 1628 180 27 24 chr5 2957510 2957804 -196672346 - AluJo SINE Alu -13 299 5 219 148 16 33 chr5 2958838 2958899 -196671251 + (TCTA)n Simple_repeat Simple_repeat 4 63 0 336 48 0 0 chr5 2959171 2959213 -196670937 + (CA)n Simple_repeat Simple_repeat 2 43 0 211 358 100 0 chr5 2959815 2959935 -196670215 + L2 LINE L2 3133 3264 -8 209 289 107 71 chr5 2960927 2961124 -196669026 - MIR SINE MIR -45 217 14 28 0 0 0 chr5 2961826 2961854 -196668296 + AT_rich Low_complexity Low_complexity 1 28 0 1953 131 0 38 chr5 2964845 2965135 -196665015 + AluSx SINE Alu 1 279 -33 210 71 0 0 chr5 2965137 2965165 -196664985 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 23 0 0 0 chr5 2966010 2966033 -196664117 + AT_rich Low_complexity Low_complexity 1 23 0 1471 157 80 44 chr5 2970557 2970711 -196659439 - THE1C LTR MaLR -12 416 269 288 0 0 0 chr5 2970711 2970743 -196659407 + (GA)n Simple_repeat Simple_repeat 1 32 0 1471 157 80 44 chr5 2970743 2970916 -196659234 - THE1C LTR MaLR -159 269 9 315 83 0 21 chr5 2970916 2970964 -196659186 - THE1B LTR MaLR -317 47 1 500 266 137 78 chr5 2971033 2971454 -196658696 - MLT1D LTR MaLR -2 465 27 238 286 12 12 chr5 2971590 2971674 -196658476 + CT-rich Low_complexity Low_complexity 4 87 0 801 236 34 0 chr5 2972173 2972351 -196657799 - MLT1G LTR MaLR -13 577 394 1572 216 18 9 chr5 2972351 2972685 -196657465 + MLT2C1 LTR ERVL 1 337 -60 453 153 201 49 chr5 2972685 2972829 -196657321 - MER4A LTR ERV1 0 465 300 1916 125 38 60 chr5 2972869 2973254 -196656896 - MER4A LTR ERV1 -240 357 2 271 242 15 0 chr5 2973506 2973572 -196656578 - MLT1G LTR MaLR -57 533 467 * 371 337 28 17 chr5 2973568 2973749 -196656401 - MLT1G LTR MaLR -407 183 1 26 0 0 0 chr5 2974257 2974283 -196655867 + AT_rich Low_complexity Low_complexity 1 26 0 627 308 97 21 chr5 2975121 2975628 -196654522 - MLT1G LTR MaLR 0 590 18 216 0 0 0 chr5 2975726 2975750 -196654400 + (TCCA)n Simple_repeat Simple_repeat 2 25 0 3037 155 28 6 chr5 2976083 2976586 -196653564 - MER1A DNA MER1_type 0 529 16 189 147 0 0 chr5 2976711 2976745 -196653405 + (TCCC)n Simple_repeat Simple_repeat 2 35 0 372 399 79 6 chr5 2976748 2977076 -196653074 + L2 LINE L2 2916 3267 -5 1843 179 0 3 chr5 2977356 2977669 -196652481 + AluSx SINE Alu 1 312 0 395 298 47 25 chr5 2978267 2978433 -196651717 - MIR SINE MIR -46 162 34 223 49 49 0 chr5 3029967 3030008 -196600142 + (TTTTA)n Simple_repeat Simple_repeat 2 44 0 471 219 0 0 chr5 3030755 3030933 -196599217 + (TG)n Simple_repeat Simple_repeat 2 179 0 404 236 6 0 chr5 3030979 3031157 -196598993 + (TG)n Simple_repeat Simple_repeat 1 179 0 362 214 7 0 chr5 3031192 3031337 -196598813 + (TG)n Simple_repeat Simple_repeat 2 147 0 324 302 82 60 chr5 3032832 3033064 -196597086 - L1M4 LINE L1 -813 5333 5097 988 190 6 0 chr5 3033143 3033317 -196596833 - FRAM SINE Alu -7 169 1 22 0 0 0 chr5 3034945 3034967 -196595183 + AT_rich Low_complexity Low_complexity 1 22 0 2267 110 3 13 chr5 3035091 3035400 -196594750 + AluSx SINE Alu 1 306 -6 212 197 0 33 chr5 3036637 3036698 -196593452 + GA-rich Low_complexity Low_complexity 3 61 0 1920 163 10 7 chr5 3037184 3037490 -196592660 + AluJb SINE Alu 6 312 0 2331 87 3 13 chr5 3038753 3039065 -196591085 - AluY SINE Alu -2 309 1 2113 131 0 0 chr5 3040326 3040652 -196589498 + AluSx SINE Alu 1 326 0 181 286 0 54 chr5 3043682 3043738 -196586412 + MIR SINE MIR 95 145 -63 204 200 0 0 chr5 3044309 3044344 -196585806 - L3 LINE CR1 -994 583 549 27 0 0 0 chr5 3045256 3045283 -196584867 + AT_rich Low_complexity Low_complexity 1 27 0 285 309 51 86 chr5 3045855 3046250 -196583900 + MLT1I LTR MaLR 20 400 -9 182 150 25 0 chr5 3048379 3048419 -196581731 + (TA)n Simple_repeat Simple_repeat 1 41 0 2262 134 10 21 chr5 3048430 3048819 -196581331 + L1PA16 LINE L1 5524 5908 -258 183 80 0 0 chr5 3048819 3048844 -196581306 + (TATATG)n Simple_repeat Simple_repeat 3 27 0 960 36 61 0 chr5 3049497 3049662 -196580488 + (TCTA)n Simple_repeat Simple_repeat 3 177 0 336 393 23 40 chr5 3050098 3050216 -196579934 + L1MC4a LINE L1 5548 5666 -2142 6921 75 6 0 chr5 3050216 3051310 -196578840 + L1PA8 LINE L1 5090 6193 0 336 393 23 40 chr5 3051310 3051544 -196578606 + L1MC4a LINE L1 5666 5895 -1913 304 318 90 42 chr5 3052712 3052901 -196577249 + L1MDa LINE L1 2441 2638 -3902 271 308 91 23 chr5 3053259 3053480 -196576670 - MER106A DNA MER1_type 0 236 1 3565 190 11 22 chr5 3053537 3054169 -196575981 - MER72 LTR ERV1 0 722 98 2216 114 3 19 chr5 3054169 3054486 -196575664 - AluSx SINE Alu 0 312 1 3565 190 11 22 chr5 3054486 3054583 -196575567 - MER72 LTR ERV1 -624 98 1 182 341 11 0 chr5 3056608 3056696 -196573454 - L2 LINE L2 -836 2478 2390 291 114 0 0 chr5 3060652 3060696 -196569454 + (CA)n Simple_repeat Simple_repeat 1 44 0 244 346 57 0 chr5 3063756 3063885 -196566265 - MIR SINE MIR -77 131 16 2193 114 3 7 chr5 3063944 3064250 -196565900 + AluSc SINE Alu 5 309 0 437 279 33 0 chr5 3065710 3065832 -196564318 - MER63 DNA MER1_type -53 783 32 2286 110 0 3 chr5 3070301 3070600 -196559550 - AluY SINE Alu -13 298 1 2059 141 3 0 chr5 3070810 3071108 -196559042 + AluSx SINE Alu 1 299 -13 330 274 109 95 chr5 3071412 3071824 -196558326 - L2 LINE L2 -31 3241 2824 280 302 113 22 chr5 3074823 3075098 -196555052 - LTR16A1 LTR ERVL -2 455 156 243 250 0 0 chr5 3076827 3076887 -196553263 + (CA)n Simple_repeat Simple_repeat 2 61 0 291 247 28 22 chr5 3077129 3077307 -196552843 + (TA)n Simple_repeat Simple_repeat 2 180 0 313 276 57 9 chr5 3077686 3077791 -196552359 + L2 LINE L2 3203 3312 -1 302 236 36 86 chr5 3080726 3080866 -196549284 + MER115 DNA AcHobo 505 637 -56 230 288 14 0 chr5 3080896 3080969 -196549181 - MER63 DNA MER1_type -8 1053 980 2120 125 7 0 chr5 3081929 3082226 -196547924 - AluSx SINE Alu -13 299 1 2349 91 3 9 chr5 3082416 3082745 -196547405 + L1PA8A LINE L1 5798 6124 -7 364 289 112 27 chr5 3084282 3084469 -196545681 - MIR SINE MIR 0 262 60 309 0 0 0 chr5 3085015 3085051 -196545099 + L1PA6 LINE L1 6111 6146 -8 881 209 81 0 chr5 3085067 3085278 -196544872 - MLT2C2 LTR ERVL -236 228 1 642 252 176 56 chr5 3086104 3086497 -196543653 + MLT1F LTR MaLR 85 524 -18 233 320 145 24 chr5 3086632 3086969 -196543181 + L2 LINE L2 2576 2953 -361 2194 92 13 10 chr5 3087318 3087623 -196542527 - AluSc SINE Alu -3 306 1 560 273 136 10 chr5 3087832 3088030 -196542120 + MER58A DNA MER1_type 1 223 -1 188 229 62 0 chr5 3089744 3089792 -196540358 + L2 LINE L2 3222 3272 0 302 276 133 0 chr5 3091225 3091330 -196538820 + L1M4 LINE L1 3039 3157 -2989 * 414 276 115 0 chr5 3091324 3091480 -196538670 + L1M4 LINE L1 3081 3254 -2892 538 266 101 38 chr5 3091580 3091847 -196538303 + L1M4 LINE L1 3579 3862 -2284 229 300 12 0 chr5 3092539 3092619 -196537531 + (TA)n Simple_repeat Simple_repeat 2 82 0 998 254 71 97 chr5 3094793 3096058 -196534092 - L1ME LINE L1 -4602 1659 371 427 341 101 23 chr5 3096252 3096818 -196533332 - L1 LINE L1 -2285 3861 3252 2828 16 0 0 chr5 3096978 3097282 -196532868 - AluYb8 SINE Alu -14 304 1 21 0 0 0 chr5 3097453 3097474 -196532676 + AT_rich Low_complexity Low_complexity 1 21 0 323 325 122 27 chr5 3097580 3098128 -196532022 - L1 LINE L1 -3381 2765 2166 384 338 55 55 chr5 3098684 3099027 -196531123 - HAL1b LINE L1 -710 638 296 1841 113 7 25 chr5 3099158 3099433 -196530717 - AluSq SINE Alu -39 274 5 284 284 61 34 chr5 3100136 3100284 -196529866 + L1ME LINE L1 5533 5684 -437 35 0 0 0 chr5 3100325 3100360 -196529790 + AT_rich Low_complexity Low_complexity 1 35 0 329 272 22 0 chr5 3100587 3100679 -196529471 - L1MC4 LINE L1 -1338 6704 6611 440 205 6 0 chr5 3101355 3101511 -196528639 + (TG)n Simple_repeat Simple_repeat 1 157 0 486 213 0 0 chr5 3101524 3101684 -196528466 + (TG)n Simple_repeat Simple_repeat 2 161 0 294 222 81 0 chr5 3101687 3101786 -196528364 + (TCTG)n Simple_repeat Simple_repeat 4 110 0 566 188 0 6 chr5 3101791 3101972 -196528178 + (TG)n Simple_repeat Simple_repeat 1 180 0 342 249 0 0 chr5 3101996 3102169 -196527981 + (TG)n Simple_repeat Simple_repeat 2 174 0 385 152 22 43 chr5 3102885 3103069 -196527081 + (CA)n Simple_repeat Simple_repeat 1 180 0 210 306 45 18 chr5 3105537 3105648 -196524502 + MER5A DNA MER1_type 1 114 -75 2369 95 0 0 chr5 3105714 3106020 -196524130 - AluSx SINE Alu -6 306 1 405 39 0 0 chr5 3106709 3106760 -196523390 + (TC)n Simple_repeat Simple_repeat 2 52 0 926 301 36 40 chr5 3108387 3108836 -196521314 - MLT1E3 LTR MaLR -12 612 166 717 207 4 0 chr5 3110502 3110772 -196519378 + (TCCA)n Simple_repeat Simple_repeat 1 271 0 1622 272 42 27 chr5 3112725 3113272 -196516878 + MLT1H1 LTR MaLR 1 555 0 287 248 91 16 chr5 3113463 3113584 -196516566 + MIR SINE MIR 85 214 -48 1385 142 0 0 chr5 3113630 3113827 -196516323 - AluSc SINE Alu -16 293 97 5603 87 1 20 chr5 3114634 3115443 -196514707 + L1PA8A LINE L1 5331 6124 -7 504 48 0 0 chr5 3116626 3116689 -196513461 + (GAAA)n Simple_repeat Simple_repeat 2 64 0 1170 117 0 0 chr5 3116689 3116868 -196513282 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 763 133 7 14 chr5 3116873 3117016 -196513134 + (GAAA)n Simple_repeat Simple_repeat 2 143 0 378 42 0 0 chr5 3117293 3117341 -196512809 + (CA)n Simple_repeat Simple_repeat 2 49 0 396 167 0 0 chr5 3118940 3119012 -196511138 + (TG)n Simple_repeat Simple_repeat 1 72 0 1472 201 30 0 chr5 3120859 3121163 -196508987 - MLT1B LTR MaLR -7 383 71 482 151 28 38 chr5 3121187 3121293 -196508857 - MLT1B LTR MaLR -272 118 14 342 204 39 107 chr5 3122861 3122964 -196507186 - L1ME1 LINE L1 0 6444 6349 1831 232 71 55 chr5 3123046 3124579 -196505571 - L1ME1 LINE L1 -77 6369 4589 1886 283 46 10 chr5 3124708 3125387 -196504763 - L1ME1 LINE L1 -2163 4263 3561 238 184 20 0 chr5 3125386 3125435 -196504715 + L1MCc LINE L1 823 872 -5551 * 291 312 102 24 chr5 3126372 3126455 -196503695 - MIR SINE MIR -40 222 147 192 77 0 0 chr5 3126455 3126481 -196503669 + (CAAAA)n Simple_repeat Simple_repeat 3 28 0 291 312 102 24 chr5 3126481 3126602 -196503548 - MIR SINE MIR -115 147 2 457 323 54 40 chr5 3128551 3128848 -196501302 - L1ME1 LINE L1 -3518 2908 2608 1896 152 3 0 chr5 3129320 3129617 -196500533 - AluJb SINE Alu -14 298 1 491 259 127 33 chr5 3129673 3130008 -196500142 - L1ME1 LINE L1 -3842 2584 2214 380 321 123 51 chr5 3130210 3130751 -196499399 - L1ME1 LINE L1 -753 2034 1451 1910 137 3 0 chr5 3130978 3131270 -196498880 + AluSq SINE Alu 1 293 -20 3574 65 9 2 chr5 3131607 3132068 -196498082 - L1PA8 LINE L1 -1 6171 5708 322 296 80 24 chr5 3132654 3132779 -196497371 - L1ME1 LINE L1 -5952 464 333 199 254 30 45 chr5 3134001 3134068 -196496082 + L2 LINE L2 3247 3312 -1 308 237 50 101 chr5 3134890 3135029 -196495121 + LTR33A LTR ERVL 61 192 -331 2242 32 43 11 chr5 3136395 3136705 -196493445 - AluY SINE Alu 0 311 3 249 108 0 0 chr5 3138250 3138287 -196491863 + (A)n Simple_repeat Simple_repeat 1 37 0 232 211 62 62 chr5 3139513 3139641 -196490509 - L1ME4a LINE L1 0 6121 5994 427 389 70 18 chr5 3142561 3142960 -196487190 + L1ME2 LINE L1 376 795 -5926 438 251 61 110 chr5 3143464 3144216 -196485934 + L1ME2 LINE L1 1191 1838 -4704 287 274 14 0 chr5 3144421 3144494 -196485656 + (CATATA)n Simple_repeat Simple_repeat 3 76 0 448 286 59 11 chr5 3144726 3145058 -196485092 + L1ME2 LINE L1 2399 2749 -3791 774 172 55 43 chr5 3145097 3145260 -196484890 + FRAM SINE Alu 1 156 -20 388 235 10 10 chr5 3145260 3145358 -196484792 + L1ME2 LINE L1 5564 5661 -879 199 200 13 13 chr5 3145361 3145436 -196484714 + (TA)n Simple_repeat Simple_repeat 1 75 0 2219 283 52 27 chr5 3145478 3146340 -196483810 + L1ME2 LINE L1 5660 6549 -9 364 223 157 16 chr5 3147910 3148031 -196482119 - L2 LINE L2 0 3313 3176 362 270 92 58 chr5 3148167 3148664 -196481486 - MLT1G1 LTR MaLR -90 452 2 412 245 90 58 chr5 3148735 3148890 -196481260 - MIR SINE MIR -17 245 86 185 280 118 11 chr5 3150798 3150891 -196479259 - L2 LINE L2 -145 3127 3025 1659 125 131 41 chr5 3151590 3151934 -196478216 + THE1C LTR MaLR 1 375 0 1523 195 13 10 chr5 3152733 3153041 -196477109 - AluJb SINE Alu -3 309 1 473 289 84 4 chr5 3154070 3154319 -196475831 - Charlie5 DNA MER1_type 0 2620 2352 469 246 27 77 chr5 3154318 3154501 -196475649 - Charlie5 DNA MER1_type -2413 199 26 * 194 180 0 60 chr5 3155796 3155896 -196474254 + (CA)n Simple_repeat Simple_repeat 1 94 0 433 257 6 39 chr5 3155961 3156140 -196474010 + (CA)n Simple_repeat Simple_repeat 1 173 0 336 272 16 38 chr5 3156313 3156497 -196473653 + (CA)n Simple_repeat Simple_repeat 1 180 0 315 256 0 0 chr5 3157396 3157486 -196472664 + (TGGA)n Simple_repeat Simple_repeat 4 93 0 932 183 7 0 chr5 3157502 3157798 -196472352 + (TGGA)n Simple_repeat Simple_repeat 1 298 0 180 176 0 0 chr5 3157816 3157850 -196472300 + (TAGA)n Simple_repeat Simple_repeat 4 37 0 809 185 6 0 chr5 3157870 3158043 -196472107 + (TAGA)n Simple_repeat Simple_repeat 3 176 0 351 0 0 0 chr5 3158361 3158400 -196471750 + (TG)n Simple_repeat Simple_repeat 2 40 0 673 187 49 76 chr5 3161299 3161524 -196468626 + MER20 DNA MER1_type 1 219 0 302 123 37 25 chr5 3161945 3162026 -196468124 + (TCTA)n Simple_repeat Simple_repeat 4 85 0 1654 225 77 64 chr5 3163077 3163543 -196466607 + MLT1H1 LTR MaLR 16 491 -64 1930 135 14 0 chr5 3163543 3163839 -196466311 - AluSx SINE Alu -12 300 1 1654 225 77 64 chr5 3163839 3163905 -196466245 + MLT1H1 LTR MaLR 491 555 0 379 318 19 7 chr5 3164049 3164203 -196465947 + MER112 DNA MER1_type 97 252 -8 407 213 7 0 chr5 3165462 3165603 -196464547 + (TG)n Simple_repeat Simple_repeat 1 142 0 759 176 0 2 chr5 3165620 3166224 -196463926 + (TG)n Simple_repeat Simple_repeat 1 602 0 701 175 4 0 chr5 3166237 3166495 -196463655 + (TG)n Simple_repeat Simple_repeat 1 259 0 188 365 73 10 chr5 3169112 3169208 -196460942 - MIR SINE MIR -159 103 2 5555 168 21 10 chr5 3169435 3170468 -196459682 - L1MA6 LINE L1 0 6300 5256 440 266 35 53 chr5 3170468 3170637 -196459513 + MER5B DNA MER1_type 8 173 -5 2062 193 29 60 chr5 3170713 3170910 -196459240 + MER82 DNA MER2_type 1 203 -450 2110 160 30 0 chr5 3170910 3171248 -196458902 + MER7A DNA MER2_type 1 346 0 2062 193 29 60 chr5 3171248 3171531 -196458619 + MER82 DNA MER2_type 203 466 -187 698 211 18 4 chr5 3171569 3172037 -196458113 + (CA)n Simple_repeat Simple_repeat 1 474 0 587 159 34 28 chr5 3172020 3172196 -196457954 + (CATA)n Simple_repeat Simple_repeat 2 178 0 * 688 274 93 13 chr5 3172892 3173202 -196456948 + MER93b LTR ERV1 39 373 0 1596 195 139 0 chr5 3175099 3175473 -196454677 - MSTA LTR MaLR -2 426 1 2134 80 35 0 chr5 3175864 3176151 -196453999 + AluSp SINE Alu 1 297 -16 2058 119 13 0 chr5 3177269 3177572 -196452578 + AluSx SINE Alu 1 307 -5 228 75 0 50 chr5 3178567 3178607 -196451543 - MLT1J1 LTR MaLR -125 321 284 573 239 16 38 chr5 3179458 3179642 -196450508 + L1MA10 LINE L1 6108 6287 -47 1405 229 38 15 chr5 3182868 3183208 -196446942 + MER7A DNA MER2_type 1 346 0 362 288 48 78 chr5 3183277 3183496 -196446654 - MIR SINE MIR -34 228 19 423 0 0 0 chr5 3183708 3183755 -196446395 + (TG)n Simple_repeat Simple_repeat 2 48 0 32 43 0 0 chr5 3184060 3184106 -196446044 + AT_rich Low_complexity Low_complexity 1 46 0 316 57 0 38 chr5 3184887 3184940 -196445210 + (TCCCG)n Simple_repeat Simple_repeat 3 53 0 591 127 25 0 chr5 3184963 3185081 -196445069 + CT-rich Low_complexity Low_complexity 3 123 0 1530 100 8 34 chr5 3185089 3185328 -196444822 - AluSg/x SINE Alu -6 306 74 581 185 0 22 chr5 3185689 3185873 -196444277 + CT-rich Low_complexity Low_complexity 1 180 0 228 294 0 0 chr5 3186537 3186656 -196443494 + (CA)n Simple_repeat Simple_repeat 1 119 0 190 299 28 47 chr5 3186703 3186810 -196443340 + L2 LINE L2 1831 1935 -1379 357 247 0 0 chr5 3187790 3187871 -196442279 - MLT1D LTR MaLR 0 505 425 196 222 97 28 chr5 3187997 3188069 -196442081 - MIR SINE MIR -97 165 89 852 203 0 0 chr5 3188124 3188465 -196441685 + (TGGA)n Simple_repeat Simple_repeat 1 341 0 765 194 0 0 chr5 3188485 3188655 -196441495 + (TGGA)n Simple_repeat Simple_repeat 1 170 0 902 181 0 3 chr5 3188673 3189038 -196441112 + (TGGA)n Simple_repeat Simple_repeat 1 363 0 1146 188 0 0 chr5 3189058 3189405 -196440745 + (TGGA)n Simple_repeat Simple_repeat 1 347 0 214 280 40 0 chr5 3190108 3190158 -196439992 + MER5B DNA MER1_type 125 176 -2 2372 81 0 0 chr5 3190250 3190560 -196439590 - AluY SINE Alu -1 310 1 324 284 193 25 chr5 3192252 3192495 -196437655 - L2 LINE L2 -1242 2072 1789 228 309 118 58 chr5 3192921 3193267 -196436883 - L2 LINE L2 -1758 1556 1190 221 273 191 22 chr5 3193343 3193574 -196436576 - L2 LINE L2 -2311 1003 734 1990 122 0 0 chr5 3195443 3195730 -196434420 + AluSx SINE Alu 11 297 -15 1771 147 0 10 chr5 3196097 3196390 -196433760 + AluJb SINE Alu 1 290 -22 2492 110 31 8 chr5 3197878 3198234 -196431916 - THE1B LTR MaLR 0 364 1 1071 224 113 36 chr5 3198307 3198642 -196431508 - MLT1A1 LTR MaLR -2 363 3 403 253 121 91 chr5 3198927 3199267 -196430883 - MLT1I LTR MaLR 0 409 60 226 271 17 0 chr5 3199374 3199433 -196430717 - MIR SINE MIR -171 91 32 1713 191 34 8 chr5 3201782 3202138 -196428012 + MLT1A1 LTR MaLR 1 365 0 303 298 116 56 chr5 3202327 3202525 -196427625 + L1M4 LINE L1 3770 3979 -2167 266 288 34 20 chr5 3202657 3202803 -196427347 + L1M4 LINE L1 4128 4275 -1871 27 29 0 0 chr5 3203364 3203398 -196426752 + AT_rich Low_complexity Low_complexity 1 34 0 1113 163 128 0 chr5 3203407 3203665 -196426485 - MER33 DNA MER1_type -1 323 33 475 327 24 6 chr5 3204104 3204272 -196425878 + MIR SINE MIR 46 216 -46 250 250 0 0 chr5 3205486 3205542 -196424608 + (CA)n Simple_repeat Simple_repeat 2 57 0 21 82 0 0 chr5 3206109 3206158 -196423992 + AT_rich Low_complexity Low_complexity 1 49 0 1186 239 34 34 chr5 3206308 3206664 -196423486 - MLT1A2 LTR MaLR 0 374 19 23 0 0 0 chr5 3208290 3208313 -196421837 + AT_rich Low_complexity Low_complexity 1 23 0 189 0 0 0 chr5 3208721 3208742 -196421408 + (TAA)n Simple_repeat Simple_repeat 2 22 0 407 306 19 19 chr5 3208744 3208901 -196421249 - MIR SINE MIR -11 251 95 297 276 14 55 chr5 3209036 3209181 -196420969 + (CATG)n Simple_repeat Simple_repeat 2 140 0 214 406 6 6 chr5 3209243 3209418 -196420732 + (CA)n Simple_repeat Simple_repeat 1 175 0 22 0 0 0 chr5 3210641 3210663 -196419487 + AT_rich Low_complexity Low_complexity 1 22 0 950 180 6 0 chr5 3210733 3210925 -196419225 - AluSx SINE Alu 0 313 121 568 176 0 0 chr5 3210961 3211052 -196419098 - AluSx SINE Alu -180 133 43 261 358 84 28 chr5 3213865 3214044 -196416106 + L3 LINE CR1 1246 1434 -143 897 211 40 44 chr5 3214366 3214593 -196415557 - ORSL DNA AcHobo -14 261 36 331 307 35 9 chr5 3215847 3215961 -196414189 - L1M4 LINE L1 -846 5798 5682 533 267 87 46 chr5 3215997 3216083 -196414067 - L1MEc LINE L1 -1784 4860 4779 1828 163 0 0 chr5 3216083 3216383 -196413767 - AluSx SINE Alu -12 300 1 533 267 87 46 chr5 3216383 3216491 -196413659 - L1MEc LINE L1 -1865 4779 4658 319 295 27 54 chr5 3216523 3216859 -196413291 - L1MEc LINE L1 -2063 4581 4255 619 244 93 136 chr5 3216865 3217126 -196413024 - L1MEc LINE L1 -2610 4034 3764 222 37 0 0 chr5 3217126 3217153 -196412997 + (TC)n Simple_repeat Simple_repeat 2 28 0 619 244 93 136 chr5 3217153 3217513 -196412637 - L1MEc LINE L1 -2880 3764 3472 4313 56 9 0 chr5 3217513 3218051 -196412099 + L1PA5 LINE L1 5612 6154 0 619 244 93 136 chr5 3218051 3218476 -196411674 - L1MEc LINE L1 -3172 3472 3031 1834 138 17 3 chr5 3218476 3218765 -196411385 + AluSq SINE Alu 1 293 -20 857 232 103 21 chr5 3218871 3219250 -196410900 - L1MEc LINE L1 -3940 2706 2297 1226 198 154 31 chr5 3219366 3219684 -196410466 - MLT1A1 LTR MaLR 0 365 9 357 144 36 18 chr5 3219684 3219795 -196410355 + (TA)n Simple_repeat Simple_repeat 2 114 0 5172 249 46 36 chr5 3219795 3221845 -196408305 - L1M4 LINE L1 -4565 2081 5 242 264 100 27 chr5 3221863 3221973 -196408177 - L1MEc LINE L1 -4766 2059 1942 284 298 53 11 chr5 3222119 3222213 -196407937 + MER20B DNA MER1_type 62 159 -624 2105 111 0 0 chr5 3224354 3224652 -196405498 + AluSg SINE Alu 1 298 -12 295 245 11 21 chr5 3226116 3226210 -196403940 + CT-rich Low_complexity Low_complexity 2 94 0 1085 239 77 11 chr5 3227479 3227830 -196402320 + MLT1A2 LTR MaLR 1 374 0 623 254 172 67 chr5 3227956 3228404 -196401746 - L1ME4a LINE L1 -6 6115 5621 2258 92 7 0 chr5 3230483 3230789 -196399361 - AluY SINE Alu -3 308 1 407 348 13 25 chr5 3230921 3231079 -196399071 - MIR SINE MIR -52 210 55 677 251 67 5 chr5 3231124 3231319 -196398831 - MER20 DNA MER1_type -5 214 8 187 255 0 43 chr5 3231606 3231653 -196398497 + L3 LINE CR1 642 686 -891 2506 96 19 25 chr5 3232072 3232438 -196397712 + THE1B LTR MaLR 1 364 0 253 260 53 60 chr5 3232742 3232892 -196397258 - MIR SINE MIR -54 208 60 27 0 0 0 chr5 3234537 3234564 -196395586 + AT_rich Low_complexity Low_complexity 1 27 0 1260 206 29 29 chr5 3238784 3239129 -196391021 - MLT1C LTR MaLR -42 425 81 243 269 0 0 chr5 3239303 3239433 -196390717 + (CA)n Simple_repeat Simple_repeat 1 130 0 282 292 0 0 chr5 3239462 3239640 -196390510 + (CA)n Simple_repeat Simple_repeat 1 178 0 435 38 0 0 chr5 3240891 3240944 -196389206 + (TG)n Simple_repeat Simple_repeat 2 54 0 193 311 58 19 chr5 3241588 3241691 -196388459 + L2 LINE L2 3155 3261 -11 237 33 0 0 chr5 3243015 3243045 -196387105 + (CA)n Simple_repeat Simple_repeat 1 30 0 279 200 0 0 chr5 3244296 3244346 -196385804 - tRNA-Gly-GGA tRNA tRNA -25 50 1 720 176 0 2 chr5 3244763 3245369 -196384781 + (TG)n Simple_repeat Simple_repeat 1 604 0 725 150 0 6 chr5 3245388 3245555 -196384595 + (TG)n Simple_repeat Simple_repeat 2 167 0 370 267 19 0 chr5 3246361 3246466 -196383684 - L2 LINE L2 -8 3305 3199 30 27 0 0 chr5 3246549 3246586 -196383564 + AT_rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr5 3246825 3246853 -196383297 + AT_rich Low_complexity Low_complexity 1 28 0 284 213 16 16 chr5 3247102 3247163 -196382987 + MER81 DNA DNA 54 114 0 229 327 89 12 chr5 3247552 3247800 -196382350 + L1ME3A LINE L1 4949 5215 -931 424 321 198 33 chr5 3247964 3248328 -196381822 + L1ME3A LINE L1 5411 5834 -336 1014 209 87 0 chr5 3248332 3248528 -196381622 + MER58A DNA MER1_type 1 213 -11 1873 194 65 7 chr5 3249224 3249627 -196380523 + MER95 LTR ERV 6 431 0 437 283 62 24 chr5 3249816 3250210 -196379940 - LTR16A LTR ERVL -1 449 2 2016 138 0 0 chr5 3250832 3251130 -196379020 + AluSx SINE Alu 1 298 -14 248 241 0 0 chr5 3251322 3251376 -196378774 - L1M4 LINE L1 -1324 4822 4769 2090 95 20 10 chr5 3252828 3253124 -196377026 + AluSq SINE Alu 1 299 -14 2388 61 0 26 chr5 3253146 3253457 -196376693 - AluY SINE Alu -7 304 2 255 337 119 42 chr5 3253630 3253915 -196376235 - L3 LINE CR1 -713 864 558 2248 73 7 3 chr5 3254758 3255058 -196375092 + AluY SINE Alu 1 301 -10 1132 251 46 28 chr5 3256526 3256893 -196373257 - MER96B DNA MER1_type? -4 413 40 436 240 21 0 chr5 3256893 3256989 -196373161 + MLT1C LTR MaLR 1 98 -369 2104 197 47 11 chr5 3256989 3257461 -196372689 + L1MA6 LINE L1 5483 5971 -329 245 275 65 58 chr5 3257641 3257779 -196372371 + MIR SINE MIR 109 247 -15 258 81 0 0 chr5 3258091 3258128 -196372022 + (TG)n Simple_repeat Simple_repeat 2 38 0 1430 225 38 3 chr5 3261577 3261924 -196368226 - L1MB4 LINE L1 -1 6179 5821 848 169 6 0 chr5 3262941 3263119 -196367031 + (ATG)n Simple_repeat Simple_repeat 2 180 0 737 202 6 0 chr5 3263150 3263508 -196366642 + (ATG)n Simple_repeat Simple_repeat 1 360 0 213 196 0 0 chr5 3263524 3263570 -196366580 + (ATG)n Simple_repeat Simple_repeat 1 46 0 185 235 0 0 chr5 3263588 3263622 -196366528 - L2 LINE L2 -19 3294 3261 230 0 33 0 chr5 3265627 3265657 -196364493 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 317 259 95 41 chr5 3265935 3266211 -196363939 + L1ME LINE L1 1072 1374 -5156 2365 38 10 0 chr5 3266211 3266503 -196363647 + AluY SINE Alu 1 295 -16 317 259 95 41 chr5 3266503 3266593 -196363557 + L1ME LINE L1 1374 1458 -5072 235 188 50 38 chr5 3266594 3266674 -196363476 + L1ME LINE L1 1361 1441 -5099 1968 143 10 0 chr5 3268613 3268907 -196361243 + AluSx SINE Alu 1 297 -15 189 269 88 81 chr5 3271124 3271284 -196358866 + MIR SINE MIR 102 262 0 186 43 0 0 chr5 3272690 3272713 -196357437 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 537 259 131 27 chr5 3274364 3274397 -196355753 - MER5C DNA MER1_type 0 324 296 362 21 21 0 chr5 3274397 3274444 -196355706 + (TG)n Simple_repeat Simple_repeat 2 49 0 537 259 131 27 chr5 3274444 3274669 -196355481 - MER5C DNA MER1_type -28 296 39 291 262 74 50 chr5 3275969 3276155 -196353995 + MIR3 SINE MIR 4 195 -63 394 305 92 0 chr5 3276514 3276655 -196353495 + MIR3 SINE MIR 18 171 -37 250 285 82 70 chr5 3277074 3277232 -196352918 + MIR SINE MIR 61 220 -42 238 217 0 0 chr5 3278341 3278387 -196351763 - L2 LINE L2 -1 3312 3267 301 253 129 93 chr5 3278820 3279045 -196351105 + L1ME LINE L1 2315 2547 -3993 4387 257 91 25 chr5 3279065 3281097 -196349053 + L1ME LINE L1 2472 4590 -1950 575 293 124 18 chr5 3282218 3282443 -196347707 - MIR SINE MIR 0 262 14 1809 123 8 0 chr5 3282596 3282839 -196347311 - AluSq SINE Alu -64 249 5 2155 120 0 13 chr5 3283493 3283802 -196346348 - AluSx SINE Alu -7 305 1 3733 178 22 38 chr5 3285829 3286611 -196343539 - LTR1 LTR ERV1 0 785 17 186 71 0 0 chr5 3288372 3288400 -196341750 + (CAAAA)n Simple_repeat Simple_repeat 1 28 0 574 214 41 0 chr5 3288526 3288705 -196341445 - L1MB3 LINE L1 -219 5952 5754 2062 139 0 16 chr5 3288738 3289048 -196341102 + AluSc SINE Alu 1 305 -4 2268 177 46 15 chr5 3294798 3295273 -196334877 - L1M2 LINE L1 -500 5812 5323 457 242 105 26 chr5 3295291 3295599 -196334551 - L1MCa LINE L1 -3862 2564 2221 1848 144 58 0 chr5 3295599 3295715 -196334435 + AluSx SINE Alu 2 110 -202 222 37 0 0 chr5 3295715 3295742 -196334408 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 1848 144 58 0 chr5 3295742 3295903 -196334247 + AluSx SINE Alu 110 295 -17 457 242 105 26 chr5 3295903 3295975 -196334175 - L1MCa LINE L1 -4205 2221 2156 317 260 135 10 chr5 3295976 3296080 -196334070 - L1 LINE L1 -944 5202 5086 834 179 5 58 chr5 3296085 3296185 -196333965 + L1 LINE L1 5171 5275 -871 2034 152 10 0 chr5 3296185 3296482 -196333668 + AluSx SINE Alu 1 300 -12 834 179 5 58 chr5 3296482 3296604 -196333546 + L1 LINE L1 5275 5381 -765 1822 160 30 3 chr5 3296604 3296936 -196333214 - MER6 DNA MER2_type 0 865 265 466 248 185 57 chr5 3296936 3296974 -196333176 - L1MCa LINE L1 -5992 434 402 1376 158 153 78 chr5 3296974 3297321 -196332829 + THE1C LTR MaLR 1 373 -2 466 248 185 57 chr5 3297321 3297649 -196332501 - L1MCa LINE L1 -6024 402 21 1986 144 48 17 chr5 3297718 3298073 -196332077 + MER47A DNA MER2_type 1 366 0 2243 116 20 0 chr5 3298533 3298834 -196331316 - AluSc SINE Alu -2 307 1 2197 132 28 25 chr5 3299861 3300216 -196329934 - THE1B LTR MaLR 0 364 9 11493 94 18 11 chr5 3300224 3301555 -196328595 - THE1B-int LTR MaLR 0 1580 235 2331 62 0 0 chr5 3301555 3301828 -196328322 - AluY SINE Alu -12 299 27 11493 94 18 11 chr5 3301828 3302065 -196328085 - THE1B-int LTR MaLR -1345 235 1 2392 126 36 22 chr5 3302066 3302424 -196327726 - THE1B LTR MaLR -1 363 1 222 91 0 0 chr5 3304283 3304316 -196325834 + (TCC)n Simple_repeat Simple_repeat 2 34 0 319 111 0 0 chr5 3305283 3305328 -196324822 - THE1B LTR MaLR 0 428 384 1012 87 24 0 chr5 3305328 3305455 -196324695 + AluSq/x SINE Alu 1 130 -182 204 326 84 0 chr5 3306081 3306176 -196323974 + MER5A DNA MER1_type 4 106 -83 182 320 100 10 chr5 3306951 3307051 -196323099 + L2 LINE L2 3150 3258 -14 418 226 0 57 chr5 3307151 3307275 -196322875 - MIR SINE MIR -56 206 90 242 265 39 29 chr5 3309825 3309927 -196320223 + HAL1 LINE L1 769 871 -1636 531 250 5 75 chr5 3309927 3310139 -196320011 + MER3 DNA MER1_type 13 209 0 368 367 29 0 chr5 3310174 3310313 -196319837 + HAL1 LINE L1 1678 1820 -687 553 241 4 12 chr5 3310358 3310625 -196319525 + GA-rich Low_complexity Low_complexity 1 264 0 215 77 0 26 chr5 3310744 3310783 -196319367 + (TG)n Simple_repeat Simple_repeat 2 39 0 276 209 88 0 chr5 3311159 3311250 -196318900 + MER5A DNA MER1_type 26 124 -65 474 300 106 34 chr5 3313319 3314024 -196316126 - L2 LINE L2 -188 3125 2370 289 271 74 25 chr5 3317720 3317842 -196312308 - LTR68 LTR ERV1 -606 134 7 185 0 0 39 chr5 3319081 3319107 -196311043 + (CAGA)n Simple_repeat Simple_repeat 1 25 0 1538 214 30 32 chr5 3321479 3321852 -196308298 + MLT1A2 LTR MaLR 3 374 0 432 245 91 22 chr5 3321893 3322093 -196308057 - MLT1H LTR MaLR -294 255 1 4781 201 49 19 chr5 3322137 3322729 -196307421 - L1MC2 LINE L1 -9 6335 5762 2044 128 34 0 chr5 3322729 3323025 -196307125 + AluSx SINE Alu 1 306 -6 4781 201 49 19 chr5 3323025 3323733 -196306417 - L1MC2 LINE L1 -582 5762 4985 558 248 14 7 chr5 3323760 3323901 -196306249 - MER69A DNA AcHobo -33 144 3 513 0 0 0 chr5 3325163 3325220 -196304930 + (TC)n Simple_repeat Simple_repeat 2 58 0 375 23 0 0 chr5 3325219 3325263 -196304887 + (TA)n Simple_repeat Simple_repeat 1 44 0 * 2569 147 19 9 chr5 3325271 3325590 -196304560 - L1PA16 LINE L1 -21 6145 5820 2347 138 5 22 chr5 3325590 3325960 -196304190 + THE1B LTR MaLR 1 364 0 2569 147 19 9 chr5 3325960 3326062 -196304088 - L1PA16 LINE L1 -346 5820 5720 1707 105 23 11 chr5 3328017 3328283 -196301867 - AluSq SINE Alu -12 301 33 183 186 0 0 chr5 3329708 3329751 -196300399 + (TTCA)n Simple_repeat Simple_repeat 1 43 0 3530 76 2 0 chr5 3329784 3330242 -196299908 + L1PA5 LINE L1 5694 6152 -2 2570 83 9 0 chr5 3330242 3330583 -196299567 + L1PA8 LINE L1 5814 6166 -6 424 343 17 14 chr5 3333766 3334131 -196296019 + (TG)n Simple_repeat Simple_repeat 1 366 0 267 223 21 98 chr5 3334105 3334298 -196295852 + (CATG)n Simple_repeat Simple_repeat 1 178 0 * 345 331 23 17 chr5 3334244 3334416 -196295734 + (TG)n Simple_repeat Simple_repeat 2 174 0 2052 104 0 7 chr5 3335466 3335788 -196294362 - AluSq SINE Alu 0 313 1 392 188 12 47 chr5 3336186 3336271 -196293879 - MER5A DNA MER1_type -83 106 25 275 346 115 6 chr5 3337063 3337219 -196292931 - MER5B DNA MER1_type -3 175 3 202 196 39 0 chr5 3337779 3337830 -196292320 + A-rich Low_complexity Low_complexity 4 56 0 3176 262 31 35 chr5 3338272 3339832 -196290318 + L1MA7 LINE L1 1 1672 -4609 9272 203 43 9 chr5 3339835 3342378 -196287772 + L1MA7 LINE L1 2902 5608 -771 1891 170 40 37 chr5 3342378 3342779 -196287371 + L1MA7 LINE L1 6094 6495 0 9272 203 43 9 chr5 3342779 3342797 -196287353 + L1MA7 LINE L1 5608 5624 -755 183 374 94 6 chr5 3343195 3343366 -196286784 - L2 LINE L2 -459 2855 2670 408 317 45 60 chr5 3343544 3343897 -196286253 - L2 LINE L2 -927 2387 2040 243 261 0 14 chr5 3344205 3344274 -196285876 + GA-rich Low_complexity Low_complexity 2 69 0 445 287 125 37 chr5 3345340 3345556 -196284594 - MIR SINE MIR -6 256 22 2069 250 70 14 chr5 3345594 3346151 -196283999 - MLT1E LTR MaLR -5 588 1 734 148 22 44 chr5 3346421 3346556 -196283594 - FLAM_C SINE Alu -10 133 2 264 213 0 0 chr5 3348625 3348672 -196281478 - L2 LINE L2 -7 3265 3219 215 91 0 23 chr5 3351392 3351436 -196278714 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1164 244 75 49 chr5 3351776 3352227 -196277923 - MLT1C LTR MaLR -4 463 1 417 301 70 21 chr5 3352294 3352480 -196277670 - L1M4 LINE L1 -1496 4886 4692 706 160 92 23 chr5 3352492 3352623 -196277527 + THE1C LTR MaLR 1 140 -235 2822 174 8 4 chr5 3352650 3353161 -196276989 + HSMAR2 DNA Mariner 169 681 -621 228 117 33 17 chr5 3353225 3353285 -196276865 + (TA)n Simple_repeat Simple_repeat 2 62 0 972 215 59 19 chr5 3353309 3353565 -196276585 - L1MA9 LINE L1 -39 6273 6008 * 1560 275 81 67 chr5 3353562 3354174 -196275976 - L1M4 LINE L1 -3884 2500 1898 1870 142 0 4 chr5 3354174 3354455 -196275695 + AluSx SINE Alu 3 282 -30 1560 275 81 67 chr5 3354455 3355017 -196275133 - L1M4 LINE L1 -4486 1898 1345 1886 154 0 0 chr5 3355017 3355310 -196274840 - AluSx SINE Alu -19 293 1 1560 275 81 67 chr5 3355310 3355864 -196274286 - L1M4 LINE L1 -5039 1345 747 365 275 118 55 chr5 3356038 3356384 -196273766 - L1MEd LINE L1 -1193 1297 1003 6871 253 67 12 chr5 3356434 3358032 -196272118 + L1PA13 LINE L1 1 1685 -5896 8291 244 35 25 chr5 3358050 3360284 -196269866 + L1PA13 LINE L1 2461 4725 -2859 2106 119 0 6 chr5 3360284 3360596 -196269554 + AluSx SINE Alu 1 310 -2 8291 244 35 25 chr5 3360596 3360910 -196269240 + L1PA13 LINE L1 4725 5034 -2550 8232 196 17 6 chr5 3360932 3363395 -196266755 + L1PA13 LINE L1 5120 7601 0 288 250 28 0 chr5 3364399 3364471 -196265679 + MIR SINE MIR 79 152 -56 1623 224 83 25 chr5 3365591 3366037 -196264113 - MER63C DNA MER1_type -213 717 246 1465 214 31 13 chr5 3367333 3367716 -196262434 + MLT1B LTR MaLR 1 390 0 394 291 14 20 chr5 3370590 3370738 -196259412 + (CATA)n Simple_repeat Simple_repeat 4 150 0 373 333 6 22 chr5 3370688 3370871 -196259279 + (CA)n Simple_repeat Simple_repeat 1 180 0 * 424 322 0 23 chr5 3370883 3371054 -196259096 + (CA)n Simple_repeat Simple_repeat 2 168 0 2352 89 47 39 chr5 3371103 3371464 -196258686 + THE1B LTR MaLR 1 364 0 916 213 77 5 chr5 3371848 3372069 -196258081 + MLT1A1 LTR MaLR 129 365 0 23 0 0 0 chr5 3372774 3372797 -196257353 + AT_rich Low_complexity Low_complexity 1 23 0 561 261 22 0 chr5 3372980 3373118 -196257032 + MER58A DNA MER1_type 37 177 -47 326 221 132 42 chr5 3373791 3373981 -196256169 + LTR33A LTR ERVL 268 474 -49 195 42 0 0 chr5 3375243 3375267 -196254883 + (A)n Simple_repeat Simple_repeat 1 24 0 1408 193 27 24 chr5 3376553 3376849 -196253301 + AluJo SINE Alu 1 297 -15 364 328 8 0 chr5 3376857 3376991 -196253159 - HAL1 LINE L1 -125 2382 2248 231 36 0 0 chr5 3377016 3377044 -196253106 + (CA)n Simple_repeat Simple_repeat 1 28 0 394 297 108 43 chr5 3377251 3377483 -196252667 - HAL1 LINE L1 -650 1857 1611 531 250 0 0 chr5 3378462 3378626 -196251524 + (CA)n Simple_repeat Simple_repeat 2 165 0 210 246 0 35 chr5 3378627 3378684 -196251466 + (CACG)n Simple_repeat Simple_repeat 1 55 0 2038 138 165 8 chr5 3379789 3380159 -196249991 + MSTA LTR MaLR 1 428 0 1030 147 32 6 chr5 3380187 3380343 -196249807 + FRAM SINE Alu 1 157 -19 2188 123 0 3 chr5 3380502 3380802 -196249348 - AluSc SINE Alu -9 300 2 255 309 71 83 chr5 3381135 3381303 -196248847 + L3b LINE CR1 1344 1509 -74 2324 118 52 6 chr5 3382229 3382577 -196247573 - THE1B LTR MaLR 0 364 1 202 363 118 0 chr5 3383953 3384055 -196246095 - L2 LINE L2 0 3313 3200 1891 55 4 12 chr5 3384476 3384731 -196245419 - L1P3 LINE L1 -533 5621 5369 1462 98 0 0 chr5 3384731 3384924 -196245226 + L1PA7 LINE L1 5960 6153 -1 3929 216 118 69 chr5 3385249 3387617 -196242533 + L1MD1 LINE L1 19 2271 -4269 1550 186 29 7 chr5 3387617 3387897 -196242253 + AluJb SINE Alu 3 288 -24 225 65 0 0 chr5 3387901 3387932 -196242218 + (CATA)n Simple_repeat Simple_repeat 2 32 0 3929 216 118 69 chr5 3387932 3388024 -196242126 + L1MD1 LINE L1 2273 2680 -3860 3212 214 64 61 chr5 3388032 3389075 -196241075 + L1MD1 LINE L1 4974 6013 -623 2434 65 0 7 chr5 3389075 3389392 -196240758 - AluY SINE Alu 0 311 2 3212 214 64 61 chr5 3389392 3389419 -196240731 + L1MD1 LINE L1 6013 6038 -598 2210 184 37 16 chr5 3389419 3389678 -196240472 - MER65A LTR ERV1 0 445 172 315 0 0 0 chr5 3389678 3389713 -196240437 + (TG)n Simple_repeat Simple_repeat 1 35 0 2210 184 37 16 chr5 3389713 3389889 -196240261 - MER65A LTR ERV1 -273 172 1 3212 214 64 61 chr5 3389889 3390381 -196239769 + L1MD1 LINE L1 6038 6528 -108 2767 29 7 0 chr5 3390381 3390690 -196239460 + AluY SINE Alu 1 311 0 3212 214 64 61 chr5 3390690 3390751 -196239399 + L1MD1 LINE L1 6528 6587 -49 210 37 0 0 chr5 3391945 3391972 -196238178 + (CA)n Simple_repeat Simple_repeat 2 28 0 180 0 0 0 chr5 3391971 3391991 -196238159 + (GA)n Simple_repeat Simple_repeat 2 21 0 * 308 158 13 0 chr5 3392090 3392166 -196237984 + (CA)n Simple_repeat Simple_repeat 2 78 0 213 204 23 23 chr5 3392185 3392273 -196237877 + (CA)n Simple_repeat Simple_repeat 2 89 0 632 229 19 61 chr5 3392871 3393085 -196237065 - MER101 LTR ERV1 -19 455 251 386 248 152 21 chr5 3393257 3393402 -196236748 - MER101 LTR ERV1 -302 172 9 460 213 31 55 chr5 3393660 3393787 -196236363 - MER5A DNA MER1_type -2 187 64 2374 100 3 0 chr5 3394015 3394316 -196235834 - AluSx SINE Alu -10 302 1 2472 63 0 13 chr5 3394746 3395047 -196235103 + AluY SINE Alu 1 297 -14 745 251 26 11 chr5 3396144 3396335 -196233815 + MLT1B LTR MaLR 195 388 -2 294 29 0 0 chr5 3397207 3397242 -196232908 + (TG)n Simple_repeat Simple_repeat 1 35 0 2197 112 6 34 chr5 3397737 3398058 -196232092 - AluSx SINE Alu 0 312 1 327 226 13 7 chr5 3401713 3401868 -196228282 + GA-rich Low_complexity Low_complexity 1 156 0 218 343 55 0 chr5 3403123 3403196 -196226954 + MIR SINE MIR 116 192 -70 306 204 68 116 chr5 3404901 3405048 -196225102 - MLT1B LTR MaLR -246 144 5 323 285 85 48 chr5 3406364 3406529 -196223621 + L1MC/D LINE L1 5537 5707 -2101 494 244 125 0 chr5 3407252 3407412 -196222738 + MER31B LTR ERV1 2 181 -285 1078 233 94 36 chr5 3407822 3408260 -196221890 + MER101 LTR ERV1 12 474 0 5271 149 16 6 chr5 3409888 3411119 -196219031 - L1PA15 LINE L1 -21 6144 4902 1233 193 7 15 chr5 3411110 3411380 -196218770 + L1PA15 LINE L1 4619 4886 -1260 * 463 209 19 19 chr5 3412639 3412797 -196217353 + A-rich Low_complexity Low_complexity 5 162 0 225 233 0 50 chr5 3412798 3412830 -196217320 + GA-rich Low_complexity Low_complexity 4 33 -27 2311 91 7 0 chr5 3412830 3413128 -196217022 + AluSq SINE Alu 13 312 -1 225 233 0 50 chr5 3413128 3413155 -196216995 + GA-rich Low_complexity Low_complexity 33 60 0 211 260 100 0 chr5 3413421 3413471 -196216679 - MER5A DNA MER1_type -5 184 130 1606 180 4 0 chr5 3413661 3413973 -196216177 - AluJb SINE Alu 0 312 33 2044 171 84 3 chr5 3414219 3414610 -196215540 + MSTB LTR MaLR 4 426 0 2360 233 33 32 chr5 3416353 3417045 -196213105 + L1MD2 LINE L1 5473 6165 -194 237 320 21 10 chr5 3417049 3417146 -196213004 + (CA)n Simple_repeat Simple_repeat 1 98 0 441 311 0 39 chr5 3417163 3417343 -196212807 + (CA)n Simple_repeat Simple_repeat 1 173 0 377 197 26 0 chr5 3417348 3417424 -196212726 + L1MD2 LINE L1 6139 6216 -143 310 278 61 0 chr5 3417532 3417647 -196212503 + L1MD2 LINE L1 6230 6351 -8 1792 132 3 31 chr5 3417653 3417942 -196212208 - AluSg1 SINE Alu -18 291 11 803 196 0 6 chr5 3421913 3422092 -196208058 + (CCCA)n Simple_repeat Simple_repeat 1 178 0 219 300 17 0 chr5 3422092 3422152 -196207998 + (TCCA)n Simple_repeat Simple_repeat 1 61 0 330 106 0 0 chr5 3424451 3424498 -196205652 + Alu SINE Alu 1 47 -256 354 128 0 0 chr5 3424510 3424573 -196205577 + Alu SINE Alu 1 47 -255 2209 92 7 0 chr5 3424599 3424882 -196205268 + AluSx SINE Alu 1 285 -27 222 274 186 18 chr5 3425792 3425905 -196204245 + MIR SINE MIR 13 144 -118 2191 130 0 0 chr5 3426531 3426832 -196203318 + AluSg SINE Alu 1 301 -9 2312 108 22 24 chr5 3427775 3428144 -196202006 + L1PA11 LINE L1 5746 6113 -61 215 91 0 23 chr5 3428248 3428292 -196201858 + (TC)n Simple_repeat Simple_repeat 1 43 0 333 68 0 0 chr5 3428303 3428347 -196201803 + (GGA)n Simple_repeat Simple_repeat 3 46 0 317 237 13 0 chr5 3429780 3429856 -196200294 + MER103 DNA DNA 8 84 -82 462 274 7 28 chr5 3430496 3430704 -196199446 + C-rich Low_complexity Low_complexity 1 203 0 608 231 82 33 chr5 3432109 3432423 -196197727 + MLT1A1 LTR MaLR 4 354 -36 25 0 0 0 chr5 3433033 3433058 -196197092 + AT_rich Low_complexity Low_complexity 1 25 0 2257 115 128 13 chr5 3433443 3433827 -196196323 - MSTA LTR MaLR 0 428 1 29 28 0 0 chr5 3433959 3433995 -196196155 + AT_rich Low_complexity Low_complexity 1 36 0 1988 211 42 68 chr5 3434113 3434757 -196195393 - MER63C DNA MER1_type -303 627 1 329 335 62 40 chr5 3434760 3434936 -196195214 + L1M4 LINE L1 3742 3921 -2225 277 261 23 0 chr5 3435383 3435471 -196194679 + L1M4 LINE L1 4137 4226 -1920 2316 109 0 6 chr5 3435862 3436175 -196193975 - AluSq SINE Alu -2 311 1 228 143 0 0 chr5 3436198 3436240 -196193910 + (T)n Simple_repeat Simple_repeat 1 42 0 21 36 0 0 chr5 3436653 3436681 -196193469 + AT_rich Low_complexity Low_complexity 1 28 0 299 276 57 57 chr5 3437113 3437225 -196192925 - L1ME4a LINE L1 -158 5963 5852 4839 95 6 13 chr5 3437225 3437912 -196192238 - L1PA8A LINE L1 -4 6127 5446 299 276 57 57 chr5 3437912 3438082 -196192068 - L1ME4a LINE L1 -268 5853 5681 23 0 0 0 chr5 3438829 3438852 -196191298 + AT_rich Low_complexity Low_complexity 1 23 0 200 309 0 0 chr5 3439228 3439325 -196190825 + (GGATG)n Simple_repeat Simple_repeat 1 97 0 399 41 0 0 chr5 3439828 3439877 -196190273 + (GA)n Simple_repeat Simple_repeat 2 50 0 231 245 0 0 chr5 3442907 3443001 -196187149 + (CA)n Simple_repeat Simple_repeat 2 95 0 558 246 2 0 chr5 3445863 3446446 -196183704 + (CA)n Simple_repeat Simple_repeat 1 584 0 247 237 0 0 chr5 3446573 3446632 -196183518 + (TG)n Simple_repeat Simple_repeat 2 60 0 310 274 11 11 chr5 3446633 3446728 -196183422 + (CA)n Simple_repeat Simple_repeat 2 96 0 225 322 35 0 chr5 3446747 3446834 -196183316 + MIR3 SINE MIR 82 171 -37 357 187 0 0 chr5 3446961 3447036 -196183114 + (CA)n Simple_repeat Simple_repeat 1 75 0 201 241 0 0 chr5 3447109 3447163 -196182987 + (CA)n Simple_repeat Simple_repeat 1 54 0 231 356 11 0 chr5 3447315 3447405 -196182745 + (CACG)n Simple_repeat Simple_repeat 1 91 0 210 286 0 18 chr5 3447716 3447772 -196182378 + GA-rich Low_complexity Low_complexity 2 56 0 32 75 0 0 chr5 3447940 3448007 -196182143 + AT_rich Low_complexity Low_complexity 1 67 0 303 28 0 0 chr5 3448474 3448510 -196181640 + (CA)n Simple_repeat Simple_repeat 1 36 0 263 272 54 17 chr5 3450580 3450838 -196179312 + MLT1A1 LTR MaLR 48 363 -11 203 333 29 0 chr5 3453593 3453662 -196176488 - L2 LINE L2 -16 3297 3227 1534 253 98 48 chr5 3454015 3454599 -196175551 + L1MCb LINE L1 717 1270 -5475 405 0 0 0 chr5 3454599 3454644 -196175506 + (CA)n Simple_repeat Simple_repeat 2 46 0 1534 253 98 48 chr5 3454644 3455711 -196174439 + L1MCb LINE L1 1270 2732 -4013 323 135 0 0 chr5 3455737 3455789 -196174361 - MLT2B1 LTR ERVL 0 520 469 305 258 32 21 chr5 3455814 3455907 -196174243 + L1MC4 LINE L1 6615 6708 -1334 * 315 178 19 122 chr5 3455867 3455974 -196174176 - L1MC4 LINE L1 -1333 6709 6614 12075 85 14 12 chr5 3456139 3457818 -196172332 - HERVL LTR ERVL -429 5225 3545 456 326 63 40 chr5 3457842 3458385 -196171765 + L1MEc LINE L1 1714 2268 -4128 1073 149 5 0 chr5 3458505 3458706 -196171444 - L1P LINE L1 -3603 2543 2342 7545 194 9 32 chr5 3458707 3461042 -196169108 + L1PA14 LINE L1 3813 6159 -2 1289 130 5 9 chr5 3461042 3461257 -196168893 + L1MA4A LINE L1 5772 5985 -318 1411 126 10 0 chr5 3461309 3461507 -196168643 - AluSc SINE Alu -5 304 105 1679 199 30 60 chr5 3462946 3463348 -196166802 - MLT1B LTR MaLR 0 390 1 280 230 10 10 chr5 3463597 3463697 -196166453 + GA-rich Low_complexity Low_complexity 3 102 0 265 306 41 54 chr5 3463699 3463846 -196166304 - MIR SINE MIR -16 246 102 275 200 0 0 chr5 3464268 3464318 -196165832 - Alu SINE Alu -253 50 1 823 205 18 0 chr5 3464318 3464489 -196165661 + L1MA4A LINE L1 6059 6232 -71 238 92 46 62 chr5 3465926 3465991 -196164159 + L1PA16 LINE L1 6100 6163 -3 1714 249 133 26 chr5 3466495 3467230 -196162920 + L1ME2 LINE L1 46 757 -5288 2326 96 3 0 chr5 3467269 3467571 -196162579 + AluSg SINE Alu 4 306 -4 222 297 47 0 chr5 3468492 3468556 -196161594 + MER5A DNA MER1_type 35 101 -88 23 0 0 0 chr5 3468609 3468632 -196161518 + AT_rich Low_complexity Low_complexity 1 23 0 187 320 126 0 chr5 3471567 3471670 -196158480 - L3 LINE CR1 -551 1026 911 355 303 123 20 chr5 3473802 3473997 -196156153 + L3 LINE CR1 773 987 -590 2116 129 3 7 chr5 3474584 3474886 -196155264 - AluSx SINE Alu -11 301 1 200 79 105 0 chr5 3478835 3478873 -196151277 - MER5B DNA MER1_type -134 44 3 25 0 0 0 chr5 3481029 3481054 -196149096 + AT_rich Low_complexity Low_complexity 1 25 0 237 333 29 10 chr5 3481494 3481596 -196148554 - MIR SINE MIR -79 183 80 459 229 0 8 chr5 3481791 3481913 -196148237 + L1ME2 LINE L1 3131 3251 -3313 785 273 188 14 chr5 3481926 3482358 -196147792 + L1ME2 LINE L1 4895 5401 -1163 959 262 62 18 chr5 3482395 3482958 -196147192 + L1ME2 LINE L1 5460 6043 -541 911 247 83 43 chr5 3483378 3483864 -196146286 + L1ME2 LINE L1 6032 6535 -47 198 327 101 24 chr5 3484674 3484842 -196145308 - MIR SINE MIR -73 189 9 1047 236 57 20 chr5 3485439 3485736 -196144414 - MER54B LTR ERVL 0 793 486 214 91 0 45 chr5 3486874 3486918 -196143232 + (CCCTAA)n Simple_repeat Simple_repeat 1 42 0 826 180 8 0 chr5 3487732 3488089 -196142061 + (TCCA)n Simple_repeat Simple_repeat 1 360 0 795 177 12 0 chr5 3488106 3488361 -196141789 + (TCCA)n Simple_repeat Simple_repeat 1 258 0 489 219 0 0 chr5 3488373 3488487 -196141663 + (TCCA)n Simple_repeat Simple_repeat 2 115 0 316 307 34 0 chr5 3488487 3488575 -196141575 - L2 LINE L2 0 3313 3223 23 0 0 0 chr5 3488928 3488951 -196141199 + AT_rich Low_complexity Low_complexity 1 23 0 2164 82 43 0 chr5 3490575 3490856 -196139294 + AluY SINE Alu 1 293 -18 210 203 17 17 chr5 3491754 3491813 -196138337 + GA-rich Low_complexity Low_complexity 3 61 0 227 240 91 109 chr5 3492298 3492473 -196137677 - MIR SINE MIR -25 183 1 374 91 0 0 chr5 3494261 3494316 -196135834 - MLT2A2 LTR ERVL 0 453 399 224 169 70 28 chr5 3494320 3494462 -196135688 + (TA)n Simple_repeat Simple_repeat 1 148 0 235 167 19 0 chr5 3494406 3494460 -196135690 + (TATAA)n Simple_repeat Simple_repeat 5 59 0 2147 126 10 0 chr5 3495437 3495739 -196134411 - AluSx SINE Alu -7 305 1 427 315 34 7 chr5 3498721 3498867 -196131283 - MIR SINE MIR -46 216 67 505 259 79 41 chr5 3499037 3499462 -196130688 - MLT1D LTR MaLR -17 450 1 269 252 145 23 chr5 3500415 3500546 -196129604 + MLT1L LTR MaLR 237 419 -128 479 222 19 0 chr5 3502541 3502649 -196127501 + HY1 scRNA scRNA 1 110 -2 683 74 0 54 chr5 3502842 3502991 -196127159 + (TTAGGG)n Simple_repeat Simple_repeat 1 141 0 632 323 76 56 chr5 3503228 3503652 -196126498 + HAL1b LINE L1 4 354 -994 348 127 0 0 chr5 3503652 3503707 -196126443 + (GGAA)n Simple_repeat Simple_repeat 4 58 0 404 281 90 36 chr5 3503708 3503875 -196126275 + HAL1b LINE L1 339 514 -834 732 290 72 28 chr5 3504816 3505358 -196124792 - L1MEc LINE L1 -3207 2922 2357 2293 109 0 13 chr5 3505402 3505715 -196124435 - AluSg SINE Alu -1 309 1 665 321 79 44 chr5 3505772 3506533 -196123617 - L1MEc LINE L1 -3890 2239 1436 285 256 25 113 chr5 3506636 3506839 -196123311 - L1MEc LINE L1 -4862 1257 1073 335 224 82 112 chr5 3506840 3507036 -196123114 - L1MEc LINE L1 -5100 1019 830 621 200 0 0 chr5 3507042 3507177 -196122973 + FRAM SINE Alu 38 172 0 314 288 73 110 chr5 3507177 3507396 -196122754 - L1MEc LINE L1 -5306 813 603 23 0 0 0 chr5 3507652 3507675 -196122475 + AT_rich Low_complexity Low_complexity 1 23 0 1160 166 5 0 chr5 3507675 3507880 -196122270 - L1PB1 LINE L1 -1 6150 5945 3042 167 22 8 chr5 3507945 3509018 -196121132 + L1M1 LINE L1 4688 5780 -523 * 5877 206 8 5 chr5 3509016 3510335 -196119815 - L1P LINE L1 -2314 3832 2509 2937 92 5 2 chr5 3510435 3510860 -196119290 - L1PA7 LINE L1 -72 6082 5657 1324 42 0 12 chr5 3513815 3513981 -196116169 - L1PA5 LINE L1 -1 6153 5990 2173 30 0 0 chr5 3513981 3514245 -196115905 + L1PA5 LINE L1 5710 5973 -182 184 306 40 40 chr5 3516325 3516449 -196113701 - L2 LINE L2 -11 3261 3138 333 0 0 0 chr5 3518506 3518543 -196111607 + (T)n Simple_repeat Simple_repeat 1 37 0 8514 212 56 74 chr5 3723792 3724083 -195906067 - L1MA6 LINE L1 -237 7482 7187 892 233 165 45 chr5 3724083 3724349 -195905801 - AluJb SINE Alu -4 298 1 8514 212 56 74 chr5 3724349 3725774 -195904376 - L1MA6 LINE L1 -532 7187 5737 1793 162 7 10 chr5 3725774 3726070 -195904080 - AluSx SINE Alu -17 295 1 8514 212 56 74 chr5 3726070 3727772 -195902378 - L1MA6 LINE L1 -1982 5737 4005 1451 131 40 33 chr5 3727772 3728046 -195902104 - AluSq SINE Alu -7 306 31 8514 212 56 74 chr5 3728046 3728147 -195902003 - L1MA6 LINE L1 -3714 4005 3904 244 250 0 0 chr5 3728147 3728207 -195901943 - AluS SINE Alu -241 60 1 8514 212 56 74 chr5 3728207 3730340 -195899810 - L1MA6 LINE L1 -3815 3904 1884 258 393 28 7 chr5 3730441 3730701 -195899449 - L1M3a LINE L1 -5227 728 357 276 341 52 12 chr5 3730823 3731112 -195899038 - L1M3a LINE L1 -5196 759 541 1030 311 39 30 chr5 3731167 3731743 -195898407 - L1M3a LINE L1 -5195 760 2 254 314 161 0 chr5 3732007 3732125 -195898025 + L1MEc LINE L1 37 173 -6223 1352 296 44 2 chr5 3732521 3732977 -195897173 + LTR16C LTR ERVL 2 476 -15 819 245 61 32 chr5 3734013 3734291 -195895859 - MLT1F1 LTR MaLR 0 567 282 181 320 31 21 chr5 3734611 3734708 -195895442 + MIR3 SINE MIR 101 198 -10 732 215 55 100 chr5 3736197 3736578 -195893572 - L1MD1 LINE L1 -12 6230 5867 625 157 9 0 chr5 3736864 3736972 -195893178 - MLT1B LTR MaLR -3 387 279 1033 248 158 25 chr5 3737717 3738153 -195891997 + MLT1D LTR MaLR 12 505 0 238 343 35 14 chr5 3739001 3739144 -195891006 - MIR SINE MIR -81 181 36 477 0 0 0 chr5 3739259 3739312 -195890838 + (CA)n Simple_repeat Simple_repeat 2 54 0 261 0 0 0 chr5 3739354 3739383 -195890767 + (CA)n Simple_repeat Simple_repeat 2 30 0 333 0 0 0 chr5 3739425 3739462 -195890688 + (CA)n Simple_repeat Simple_repeat 2 38 0 225 0 0 0 chr5 3739462 3739487 -195890663 + (A)n Simple_repeat Simple_repeat 1 25 0 2469 52 0 29 chr5 3740868 3741174 -195888976 - AluY SINE Alu -14 297 1 1353 149 117 25 chr5 3741176 3741457 -195888693 - AluY SINE Alu -4 307 1 999 78 8 0 chr5 3741476 3741605 -195888545 - AluY SINE Alu -181 130 1 964 88 0 0 chr5 3742585 3742721 -195887429 + L1PA14 LINE L1 6023 6158 -3 302 257 57 9 chr5 3744730 3744835 -195885315 - MIR SINE MIR -12 250 141 21 0 0 0 chr5 3746381 3746402 -195883748 + AT_rich Low_complexity Low_complexity 1 21 0 2158 119 3 0 chr5 3747614 3747909 -195882241 - AluSx SINE Alu -16 296 1 231 217 0 0 chr5 3749153 3749213 -195880937 + (CA)n Simple_repeat Simple_repeat 2 61 0 213 310 0 49 chr5 3749699 3749883 -195880267 + G-rich Low_complexity Low_complexity 2 176 0 239 231 52 35 chr5 3749962 3750135 -195880015 + (GGGTG)n Simple_repeat Simple_repeat 5 180 0 394 144 0 76 chr5 3750428 3750546 -195879604 + AluSq/x SINE Alu 8 116 -187 25 65 0 0 chr5 3753979 3754025 -195876125 + AT_rich Low_complexity Low_complexity 1 46 0 315 0 0 0 chr5 3754591 3754626 -195875524 + (CA)n Simple_repeat Simple_repeat 2 36 0 262 214 230 16 chr5 3755197 3755323 -195874827 - MIR SINE MIR -43 219 67 2415 81 0 0 chr5 3755728 3756025 -195874125 - AluY SINE Alu -14 297 1 267 286 36 27 chr5 3756844 3756956 -195873194 + MIR SINE MIR 17 129 -133 2222 120 10 0 chr5 3756982 3757290 -195872860 - AluSp SINE Alu -2 311 1 218 245 0 0 chr5 3758235 3758284 -195871866 - MIR SINE MIR -13 249 201 358 298 8 8 chr5 3758639 3758763 -195871387 - MER5B DNA MER1_type -49 129 6 5648 182 56 10 chr5 3759979 3760498 -195869652 + Tigger3b DNA MER2_type 13 507 -2521 180 0 0 0 chr5 3760498 3760518 -195869632 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 5648 182 56 10 chr5 3760518 3760539 -195869611 + Tigger3b DNA MER2_type 507 526 -2502 2350 119 0 0 chr5 3760539 3760851 -195869299 + AluSx SINE Alu 1 312 0 5648 182 56 10 chr5 3760851 3761475 -195868675 + Tigger3b DNA MER2_type 526 1231 0 1619 46 0 0 chr5 3761810 3762007 -195868143 - L1PA5 LINE L1 0 6154 5958 291 252 84 35 chr5 3762034 3762177 -195867973 - L1ME LINE L1 -450 5671 5522 27 0 0 0 chr5 3762374 3762401 -195867749 + AT_rich Low_complexity Low_complexity 1 27 0 199 239 0 0 chr5 3763085 3763131 -195867019 - MIR SINE MIR -111 151 106 7435 156 26 2 chr5 3763328 3765316 -195864834 - L1PA14 LINE L1 -214 5947 3919 200 83 0 28 chr5 3765316 3765352 -195864798 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 7067 26 0 1 chr5 3765352 3766159 -195863991 - L1PA3 LINE L1 -24 6131 5326 6487 34 0 0 chr5 3766156 3766930 -195863220 + L1PA3 LINE L1 4559 5332 -814 * 3957 167 17 21 chr5 3766924 3767117 -195863033 - L1PA14 LINE L1 -2221 3925 3733 * 2295 100 7 0 chr5 3767117 3767416 -195862734 - AluSg SINE Alu -9 301 1 3957 167 17 21 chr5 3767416 3767970 -195862180 - L1PA14 LINE L1 -2413 3733 3181 314 264 241 62 chr5 3768083 3768778 -195861372 - L1M2 LINE L1 -4300 2096 1297 234 0 0 0 chr5 3768942 3768968 -195861182 + (CA)n Simple_repeat Simple_repeat 2 27 0 308 286 52 28 chr5 3769061 3769309 -195860841 - L1ME LINE L1 -5262 808 555 2133 168 32 8 chr5 3769862 3770242 -195859908 - MLT1B LTR MaLR -1 389 1 938 314 99 8 chr5 3770242 3770891 -195859259 + L2 LINE L2 1916 2716 -598 394 282 41 9 chr5 3770925 3771145 -195859005 + L1ME3 LINE L1 4382 4608 -1538 789 62 0 23 chr5 3771153 3771281 -195858869 + (TG)n Simple_repeat Simple_repeat 2 126 0 225 0 0 0 chr5 3771448 3771473 -195858677 + (CA)n Simple_repeat Simple_repeat 2 26 0 978 258 98 43 chr5 3771479 3772222 -195857928 + L1ME3 LINE L1 5121 5921 -241 184 346 80 16 chr5 3772262 3772450 -195857700 + L2 LINE L2 2826 3025 -288 398 313 33 0 chr5 3772467 3772617 -195857533 + L2 LINE L2 3141 3295 -18 241 321 68 21 chr5 3774104 3774294 -195855856 + L2 LINE L2 2881 3079 -234 256 276 67 29 chr5 3774418 3774523 -195855627 + L2 LINE L2 3201 3309 -4 1318 213 135 19 chr5 3776102 3776516 -195853634 + MLT1C LTR MaLR 5 466 -1 255 119 45 15 chr5 3779685 3779752 -195850398 + GA-rich Low_complexity Low_complexity 1 69 0 4106 211 40 34 chr5 3781012 3781048 -195849102 + L1M3 LINE L1 4213 4247 -1936 189 74 0 0 chr5 3781048 3781075 -195849075 + (CA)n Simple_repeat Simple_repeat 1 27 0 4106 211 40 34 chr5 3781075 3782432 -195847718 + L1M3 LINE L1 4247 5613 -570 939 177 0 0 chr5 3782454 3782601 -195847549 + FRAM SINE Alu 6 152 -24 468 91 0 0 chr5 3782610 3782676 -195847474 + (TAGA)n Simple_repeat Simple_repeat 3 68 0 249 33 0 0 chr5 3783522 3783552 -195846598 + (TG)n Simple_repeat Simple_repeat 1 30 0 1726 168 3 18 chr5 3783698 3783984 -195846166 - AluJo SINE Alu -30 282 1 2094 119 0 17 chr5 3791397 3791699 -195838451 - AluSx SINE Alu -15 297 1 1564 218 78 43 chr5 3791840 3792158 -195837992 - MLT1D LTR MaLR 0 505 163 2179 125 0 0 chr5 3792158 3792447 -195837703 - AluSx SINE Alu -23 289 1 1564 218 78 43 chr5 3792447 3792615 -195837535 - MLT1D LTR MaLR -342 163 2 262 371 34 0 chr5 3792993 3793082 -195837068 + L2 LINE L2 3165 3256 -16 430 254 14 14 chr5 3793272 3793410 -195836740 + L2 LINE L2 3175 3312 -1 4206 106 23 2 chr5 3793556 3794159 -195835991 - L1PB2 LINE L1 -114 6037 5422 1043 216 5 10 chr5 3794164 3794368 -195835782 - AluJo SINE Alu -26 286 84 2295 108 0 0 chr5 3794754 3795049 -195835101 + AluSg SINE Alu 1 295 -15 43966 34 18 2 chr5 3797058 3803108 -195827042 + L1PA3 LINE L1 1 6155 0 22 0 0 0 chr5 3803182 3803204 -195826946 + AT_rich Low_complexity Low_complexity 1 22 0 1037 291 40 2 chr5 3803219 3803669 -195826481 + L1M4 LINE L1 4138 4604 -1542 665 175 7 0 chr5 3803679 3803816 -195826334 + (ATG)n Simple_repeat Simple_repeat 1 138 0 255 170 0 0 chr5 3803926 3803973 -195826177 + (ATG)n Simple_repeat Simple_repeat 1 47 0 862 271 116 32 chr5 3804010 3804289 -195825861 + L1M4 LINE L1 4647 4901 -1245 207 0 0 0 chr5 3804289 3804312 -195825838 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 862 271 116 32 chr5 3804312 3804619 -195825531 + L1M4 LINE L1 4901 5282 -864 645 243 34 28 chr5 3805273 3805450 -195824700 - MER20 DNA MER1_type -31 188 11 254 169 34 17 chr5 3806359 3806418 -195823732 + MLT1K LTR MaLR 184 243 -345 341 21 0 21 chr5 3806736 3806783 -195823367 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 1298 214 21 32 chr5 3806787 3807072 -195823078 - AluJo SINE Alu -30 282 1 461 198 8 0 chr5 3807120 3807246 -195822904 + (TG)n Simple_repeat Simple_repeat 2 128 0 239 274 0 16 chr5 3807274 3807336 -195822814 - MIR3 SINE MIR -29 179 119 2226 125 0 22 chr5 3807667 3807986 -195822164 + AluSx SINE Alu 1 312 0 392 312 36 84 chr5 3808420 3808776 -195821374 + L3 LINE CR1 1207 1545 -32 291 209 186 0 chr5 3808936 3809022 -195821128 + LTR16A LTR ERVL 242 343 -107 186 349 16 0 chr5 3809860 3809923 -195820227 - MIR3 SINE MIR -3 205 142 216 0 0 0 chr5 3810965 3810989 -195819161 + (T)n Simple_repeat Simple_repeat 1 24 0 565 198 132 56 chr5 3816190 3816387 -195813763 + MER20 DNA MER1_type 7 218 -1 200 32 32 0 chr5 3816937 3816946 -195813204 + (CAA)n Simple_repeat Simple_repeat 2 9 -24 2058 133 0 25 chr5 3816946 3817262 -195812888 + AluSx SINE Alu 1 308 -4 200 32 32 0 chr5 3817262 3817283 -195812867 + (CAA)n Simple_repeat Simple_repeat 9 33 0 225 0 0 0 chr5 3821372 3821397 -195808753 + (T)n Simple_repeat Simple_repeat 1 25 0 596 253 122 90 chr5 3822858 3824506 -195805644 + L1ME1 LINE L1 497 2210 -4186 2120 139 3 3 chr5 3824506 3824816 -195805334 - AluSx SINE Alu -2 310 1 596 253 122 90 chr5 3824816 3824976 -195805174 + L1ME1 LINE L1 2210 2363 -4033 279 169 67 0 chr5 3824982 3825071 -195805079 + (TA)n Simple_repeat Simple_repeat 1 95 0 3586 261 99 43 chr5 3825098 3826420 -195803730 + L1ME1 LINE L1 2861 4108 -2127 222 37 0 0 chr5 3826420 3826447 -195803703 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1838 143 34 0 chr5 3826455 3826721 -195803429 - AluSx SINE Alu -32 280 6 3586 261 99 43 chr5 3826721 3826941 -195803209 + L1ME1 LINE L1 4114 4320 -1915 1235 259 61 5 chr5 3826941 3827316 -195802834 - MSTD LTR MaLR 0 396 1 3586 261 99 43 chr5 3827316 3828856 -195801294 + L1ME1 LINE L1 4320 6131 -104 2541 271 65 31 chr5 3829240 3831172 -195798978 + L1MEc LINE L1 2019 3985 -2230 364 236 32 13 chr5 3831454 3831611 -195798539 + L1MEc LINE L1 2924 3083 -3132 * 573 264 31 23 chr5 3831591 3831852 -195798298 + L1MEc LINE L1 4223 4485 -1730 1357 257 104 48 chr5 3831955 3832512 -195797638 + L1ME3 LINE L1 4228 4753 -1409 186 103 0 0 chr5 3832512 3832541 -195797609 + (CA)n Simple_repeat Simple_repeat 2 30 0 1357 257 104 48 chr5 3832541 3833609 -195796541 + L1ME3 LINE L1 4753 5938 -224 4618 22 2 4 chr5 3834012 3834557 -195795593 - L1PA4 LINE L1 -19 6136 5593 21 0 0 0 chr5 3834562 3834583 -195795567 + AT_rich Low_complexity Low_complexity 1 21 0 216 67 0 0 chr5 3834938 3834968 -195795182 + (CA)n Simple_repeat Simple_repeat 2 31 0 2201 69 0 3 chr5 3835751 3836042 -195794108 - L1PA7 LINE L1 0 6154 5865 2789 93 37 0 chr5 3836042 3836471 -195793679 + L1P LINE L1 3443 3887 -2259 25 0 0 0 chr5 3836506 3836531 -195793619 + AT_rich Low_complexity Low_complexity 1 25 0 2361 86 0 10 chr5 3836976 3837277 -195792873 - AluSc SINE Alu -11 298 1 5147 19 0 0 chr5 3837629 3838241 -195791909 + L1PA3 LINE L1 5568 6179 0 212 328 23 23 chr5 3838272 3838400 -195791750 + MIR3 SINE MIR 71 198 -10 1904 93 9 102 chr5 3838988 3839310 -195790840 + AluSc SINE Alu 1 292 -17 909 203 190 7 chr5 3839342 3839632 -195790518 - MLT1B LTR MaLR -41 349 7 276 172 0 0 chr5 3839762 3839820 -195790330 + (CA)n Simple_repeat Simple_repeat 1 58 0 2502 77 0 0 chr5 3839990 3840301 -195789849 - AluY SINE Alu 0 311 1 230 300 0 29 chr5 3840901 3840971 -195789179 - L2 LINE L2 0 3313 3246 486 210 5 38 chr5 3841133 3841319 -195788831 + (CATATA)n Simple_repeat Simple_repeat 1 180 0 369 224 21 32 chr5 3841320 3841607 -195788543 + (CA)n Simple_repeat Simple_repeat 1 283 0 333 304 8 16 chr5 3841618 3841743 -195788407 + (CA)n Simple_repeat Simple_repeat 2 125 0 240 226 23 23 chr5 3841960 3842093 -195788057 + (CATA)n Simple_repeat Simple_repeat 2 134 0 1960 208 16 33 chr5 3843262 3843292 -195786858 + L1MB5 LINE L1 5585 5614 -560 2386 125 11 24 chr5 3843292 3843661 -195786489 - THE1B LTR MaLR 0 364 1 1960 208 16 33 chr5 3843661 3844201 -195785949 + L1MB5 LINE L1 5614 6145 -29 315 219 25 12 chr5 3844240 3844400 -195785750 + CT-rich Low_complexity Low_complexity 2 163 0 1263 199 69 0 chr5 3844409 3844655 -195785495 + AluJo SINE Alu 25 287 -25 258 116 0 0 chr5 3844675 3844718 -195785432 + L1MB5 LINE L1 6126 6168 -6 183 129 0 0 chr5 3844850 3844881 -195785269 + (TTTTTG)n Simple_repeat Simple_repeat 6 36 0 393 215 23 11 chr5 3846032 3846209 -195783941 + CT-rich Low_complexity Low_complexity 1 179 0 667 184 0 16 chr5 3846225 3846597 -195783553 + CT-rich Low_complexity Low_complexity 1 365 0 389 36 18 0 chr5 3848270 3848325 -195781825 + (CA)n Simple_repeat Simple_repeat 2 57 0 683 251 73 71 chr5 3850014 3850425 -195779725 - L1MD2 LINE L1 -245 6048 5637 200 245 9 0 chr5 3850447 3850553 -195779597 + (TA)n Simple_repeat Simple_repeat 1 107 0 346 279 0 0 chr5 3850554 3850640 -195779510 + L1MC4 LINE L1 6616 6701 -1341 1208 218 97 15 chr5 3850641 3851168 -195778982 - L1MD2 LINE L1 -668 5625 5071 1746 263 96 43 chr5 3851271 3852554 -195777596 - L1MD2 LINE L1 -2880 3200 1771 288 77 0 0 chr5 3852554 3852593 -195777557 + (TG)n Simple_repeat Simple_repeat 2 40 0 1746 263 96 43 chr5 3852593 3853399 -195776751 - L1MD2 LINE L1 -4309 1771 1009 794 254 57 19 chr5 3853400 3853751 -195776399 - L1MD2 LINE L1 -5180 903 540 250 322 7 33 chr5 3853817 3853969 -195776181 + L1ME1 LINE L1 278 425 -6138 462 278 82 26 chr5 3854197 3854511 -195775639 + L1ME1 LINE L1 1368 1849 -4714 234 150 0 0 chr5 3854487 3854527 -195775623 + L1ME1 LINE L1 2940 2979 -3403 * 1969 122 45 0 chr5 3854562 3854850 -195775300 + AluSq SINE Alu 1 301 -12 312 247 0 0 chr5 3854897 3854982 -195775168 + L1ME1 LINE L1 4800 4884 -1498 8208 124 22 12 chr5 3854994 3855160 -195774990 + L1PA10 LINE L1 4033 4196 -1972 1576 112 8 48 chr5 3855160 3855409 -195774741 + AluSc SINE Alu 63 301 -8 8208 124 22 12 chr5 3855409 3856575 -195773575 + L1PA10 LINE L1 4196 5382 -786 2846 13 0 0 chr5 3856575 3856888 -195773262 + AluYb8 SINE Alu 2 314 -4 8208 124 22 12 chr5 3856888 3857672 -195772478 + L1PA10 LINE L1 5382 6157 -11 21 0 0 0 chr5 3857680 3857701 -195772449 + AT_rich Low_complexity Low_complexity 1 21 0 1207 242 34 24 chr5 3857701 3858196 -195771954 + L1ME1 LINE L1 4879 5378 -1004 * 1821 198 21 7 chr5 3858194 3858619 -195771531 + L1MC3 LINE L1 7335 7765 -20 2707 228 78 24 chr5 3858644 3859620 -195770530 + L1ME1 LINE L1 5358 6398 -4 2895 13 0 0 chr5 3859625 3859943 -195770207 - AluYb8 SINE Alu 0 318 1 219 69 0 0 chr5 3861312 3861341 -195768809 + (TA)n Simple_repeat Simple_repeat 2 30 0 312 70 0 0 chr5 3862267 3862310 -195767840 + (TG)n Simple_repeat Simple_repeat 2 44 0 1066 271 12 12 chr5 3863130 3863470 -195766680 - MER58B DNA MER1_type 0 341 2 243 0 0 0 chr5 3866190 3866217 -195763933 + (A)n Simple_repeat Simple_repeat 1 27 0 551 290 70 25 chr5 3866556 3866756 -195763394 - MIR SINE MIR -3 259 51 267 161 0 0 chr5 3869184 3869240 -195760910 + (TG)n Simple_repeat Simple_repeat 1 56 0 298 256 0 13 chr5 3870822 3870900 -195759250 + GA-rich Low_complexity Low_complexity 2 78 0 186 103 0 0 chr5 3872201 3872230 -195757920 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 2394 119 31 88 chr5 3873503 3873957 -195756193 - MSTA LTR MaLR 0 428 1 282 219 0 0 chr5 3877398 3877462 -195752688 + (CA)n Simple_repeat Simple_repeat 1 64 0 1322 163 23 62 chr5 3878452 3878758 -195751392 + L1MA9 LINE L1 6013 6306 -6 1233 245 71 31 chr5 3879771 3880220 -195749930 + MLT1C LTR MaLR 1 467 0 2006 130 0 3 chr5 3881649 3881948 -195748202 - AluSc SINE Alu -11 298 1 2938 192 11 5 chr5 3882062 3882634 -195747516 + L1MA8 LINE L1 5344 5918 -373 1403 197 11 28 chr5 3882742 3883026 -195747124 - MLT2B1 LTR ERVL -240 280 2 327 49 0 0 chr5 3884456 3884497 -195745653 + (CA)n Simple_repeat Simple_repeat 2 42 0 2095 114 0 7 chr5 3885539 3885845 -195744305 + AluSq SINE Alu 1 304 -9 21 0 0 0 chr5 3886345 3886366 -195743784 + AT_rich Low_complexity Low_complexity 1 21 0 306 227 0 13 chr5 3887711 3887786 -195742364 + MER116 DNA Mariner 1 74 -6 22 0 0 0 chr5 3889847 3889869 -195740281 + AT_rich Low_complexity Low_complexity 1 22 0 651 243 82 19 chr5 3890518 3890724 -195739426 + MER20 DNA MER1_type 1 219 0 281 273 71 71 chr5 3891077 3891260 -195738890 - MIR3 SINE MIR -25 183 1 3676 29 29 43 chr5 3891791 3892275 -195737875 + L1PA6 LINE L1 5677 6153 -1 1337 166 166 36 chr5 3894728 3895060 -195735090 + THE1C LTR MaLR 1 375 0 222 286 0 0 chr5 3896600 3896649 -195733501 + L2 LINE L2 3248 3296 -17 198 171 0 0 chr5 3898137 3898178 -195731972 + (CA)n Simple_repeat Simple_repeat 2 42 0 256 341 0 0 chr5 3898362 3898453 -195731697 + (CATATA)n Simple_repeat Simple_repeat 2 92 0 516 303 89 62 chr5 3898723 3899106 -195731044 + L1M4 LINE L1 4157 4553 -1593 2076 129 0 0 chr5 3899106 3899409 -195730741 + AluSx SINE Alu 1 303 -9 516 303 89 62 chr5 3899409 3899441 -195730709 + L1M4 LINE L1 4553 4583 -1563 520 261 58 22 chr5 3899541 3899679 -195730471 - MIR SINE MIR -22 240 98 587 310 67 8 chr5 3902964 3903203 -195726947 - MIR SINE MIR -9 253 1 9715 179 76 56 chr5 3903576 3906069 -195724081 + L1MCa LINE L1 17 2559 -3867 1705 131 27 0 chr5 3906076 3906335 -195723815 + AluSq SINE Alu 34 299 -14 6554 172 8 26 chr5 3906342 3907496 -195722654 + L1P LINE L1 3284 4414 -1732 2071 137 0 3 chr5 3907496 3907810 -195722340 + AluSq SINE Alu 1 313 0 6554 172 8 26 chr5 3907810 3907951 -195722199 + L1P LINE L1 4414 4556 -1590 402 236 27 0 chr5 3908056 3908166 -195721984 - L1ME3 LINE L1 -318 5844 5732 1612 227 16 68 chr5 3908169 3908654 -195721496 - L1ME2 LINE L1 -306 5858 5399 731 193 47 23 chr5 3908656 3908827 -195721323 + MLT1H LTR MaLR 2 176 -373 1105 189 84 17 chr5 3908848 3909144 -195721006 - L1 LINE L1 -745 5401 5086 257 337 37 6 chr5 3909287 3909450 -195720700 - L2 LINE L2 -663 2651 2484 1821 138 97 13 chr5 3909543 3909854 -195720296 - MER1B DNA MER1_type 0 337 1 303 286 23 12 chr5 3910850 3911021 -195719129 - L1M4 LINE L1 -3136 3010 2838 * 765 179 14 0 chr5 3911020 3911160 -195718990 - L1ME2 LINE L1 -9 6155 6014 2217 108 0 0 chr5 3911396 3911701 -195718449 + AluSx SINE Alu 1 305 -7 297 281 67 76 chr5 3911706 3911930 -195718220 + MLT1J LTR MaLR 108 329 -182 2043 101 0 14 chr5 3912141 3912429 -195717721 - AluSc SINE Alu -25 284 1 1676 177 16 6 chr5 3912430 3912741 -195717409 - L1 LINE L1 -1156 4990 4677 796 213 61 17 chr5 3912840 3913070 -195717080 - L1 LINE L1 -1601 4545 4306 382 130 0 0 chr5 3913289 3913343 -195716807 + MER68 LTR ERV1 168 221 -341 1712 179 88 18 chr5 3913343 3913511 -195716639 + MSTB1 LTR MaLR 15 170 -262 186 43 0 0 chr5 3913511 3913534 -195716616 + (TTCCC)n Simple_repeat Simple_repeat 1 23 0 1712 179 88 18 chr5 3913534 3913705 -195716445 + MSTB1 LTR MaLR 170 378 -54 2160 121 0 3 chr5 3913706 3914011 -195716139 - AluSx SINE Alu -7 305 2 591 203 73 0 chr5 3914014 3914137 -195716013 + MER68 LTR ERV1 431 562 0 205 338 62 33 chr5 3914181 3914421 -195715729 + L2 LINE L2 2625 2871 -443 1795 168 3 3 chr5 3915285 3915589 -195714561 - AluJb SINE Alu -8 304 1 210 253 101 40 chr5 3915608 3915707 -195714443 - L2 LINE L2 -17 3296 3192 2343 163 46 6 chr5 3916502 3917363 -195712787 - L1M1 LINE L1 -522 5781 4885 2146 145 62 31 chr5 3917821 3918241 -195711909 + Tigger2a DNA MER2_type 2 434 0 38 68 0 0 chr5 3918844 3918917 -195711233 + GC_rich Low_complexity Low_complexity 1 73 0 256 341 0 0 chr5 3919262 3919353 -195710797 + (CATATA)n Simple_repeat Simple_repeat 2 92 0 307 310 99 55 chr5 3919623 3920007 -195710143 + L1M4 LINE L1 4157 4557 -1589 594 112 119 0 chr5 3920008 3920151 -195709999 + AluSx SINE Alu 2 161 -151 256 149 15 30 chr5 3920417 3920484 -195709666 + GA-rich Low_complexity Low_complexity 3 68 0 232 328 0 0 chr5 3920667 3920731 -195709419 + MIR SINE MIR 45 108 -154 2933 112 18 7 chr5 3921990 3922438 -195707712 + L1PA11 LINE L1 5720 6172 -2 549 158 15 0 chr5 3922461 3922660 -195707490 + L1MA4A LINE L1 6037 6299 -4 1197 130 0 5 chr5 3923778 3923962 -195706188 + AluSg/x SINE Alu 119 301 -9 2215 90 0 10 chr5 3923965 3924265 -195705885 + AluSg1 SINE Alu 12 308 -1 192 125 0 0 chr5 3924290 3924322 -195705828 + (TA)n Simple_repeat Simple_repeat 2 33 0 212 220 0 20 chr5 3924460 3924510 -195705640 + (TA)n Simple_repeat Simple_repeat 2 50 0 1696 125 0 4 chr5 3924838 3925086 -195705064 - AluSx SINE Alu -17 295 49 1579 159 0 51 chr5 3925379 3925693 -195704457 - AluJo SINE Alu -14 298 1 219 343 71 10 chr5 3926334 3926433 -195703717 + L2 LINE L2 3162 3266 -6 2243 100 0 0 chr5 3926510 3926810 -195703340 + AluSx SINE Alu 1 300 -12 2307 89 0 0 chr5 3927372 3927676 -195702474 - AluSx SINE Alu -8 304 1 2055 178 40 40 chr5 3928575 3928970 -195701180 - LTR24C LTR ERV1 -204 431 34 1449 192 7 23 chr5 3928970 3929272 -195700878 - AluJo SINE Alu -15 297 1 2055 178 40 40 chr5 3929272 3929303 -195700847 - LTR24C LTR ERV1 -600 35 5 1023 207 81 54 chr5 3929304 3929599 -195700551 + LTR16A1 LTR ERVL 100 402 -55 183 80 0 0 chr5 3929795 3929820 -195700330 + (ATG)n Simple_repeat Simple_repeat 2 26 0 803 146 0 31 chr5 3929844 3929974 -195700176 - FLAM_C SINE Alu -6 127 2 2247 144 11 0 chr5 3930428 3930776 -195699374 + L1PA12 LINE L1 5569 5920 -248 2196 102 0 0 chr5 3930776 3931070 -195699080 - AluSx SINE Alu -18 294 1 1242 155 81 27 chr5 3931092 3931350 -195698800 - L1MA9 LINE L1 -8 6304 6033 512 146 42 62 chr5 3931351 3931385 -195698765 - Tigger3(Golem) DNA MER2_type -511 2518 2485 865 94 0 36 chr5 3931385 3931523 -195698627 - FLAM_C SINE Alu 0 133 1 512 146 42 62 chr5 3931523 3931615 -195698535 - Tigger3(Golem) DNA MER2_type -544 2485 2393 2087 106 3 7 chr5 3931615 3931917 -195698233 - AluSq SINE Alu -12 301 1 512 146 42 62 chr5 3931917 3931933 -195698217 - Tigger3(Golem) DNA MER2_type -636 2393 2378 293 237 32 21 chr5 3931941 3932034 -195698116 - Tigger3(Golem) DNA MER2_type -2879 150 57 1138 212 73 64 chr5 3932409 3932767 -195697383 - MLT1A2 LTR MaLR -13 361 1 2174 153 18 45 chr5 3932809 3932983 -195697167 + MLT1B LTR MaLR 1 178 -212 2477 102 123 5 chr5 3932983 3933365 -195696785 - MSTA LTR MaLR -1 427 1 2174 153 18 45 chr5 3933365 3933589 -195696561 + MLT1B LTR MaLR 178 388 -2 499 244 42 0 chr5 3933589 3933708 -195696442 + MER20 DNA MER1_type 84 207 -12 2300 97 0 0 chr5 3933975 3934284 -195695866 + AluSx SINE Alu 1 309 -3 2520 46 0 0 chr5 3934432 3934737 -195695413 + AluY SINE Alu 1 305 -6 1329 176 24 41 chr5 3934866 3935161 -195694989 - AluJo SINE Alu -22 290 1 287 297 169 17 chr5 3936893 3937011 -195693139 - L2 LINE L2 0 3272 3137 2005 129 0 3 chr5 3937400 3937695 -195692455 - AluSx SINE Alu -18 294 1 1446 211 91 21 chr5 3937707 3938091 -195692059 - MLT1C LTR MaLR -56 411 1 1690 154 58 141 chr5 3938091 3938538 -195691612 - MLT1C-int LTR MaLR 0 1371 962 1648 174 3 13 chr5 3938881 3939180 -195690970 + AluJo SINE Alu 1 296 -16 1755 181 85 30 chr5 3939378 3939814 -195690336 + MLT1C LTR MaLR 1 460 -7 2437 176 18 31 chr5 3940153 3940385 -195689765 - L1P4 LINE L1 -456 5710 5477 1811 183 0 6 chr5 3940385 3940697 -195689453 - AluJo SINE Alu -2 310 1 2437 176 18 31 chr5 3940697 3941366 -195688784 - L1P4 LINE L1 -689 5477 4823 232 189 0 38 chr5 3941583 3941636 -195688514 + CT-rich Low_complexity Low_complexity 4 54 0 523 186 88 0 chr5 3942729 3942842 -195687308 - HAL1 LINE L1 -754 1753 1631 1015 177 4 44 chr5 3942912 3943138 -195687012 - AluJo SINE Alu -9 303 87 1534 180 7 26 chr5 3943927 3944233 -195685917 + AluJo SINE Alu 1 300 -12 2602 83 13 44 chr5 3944397 3944616 -195685534 - THE1C LTR MaLR 0 375 172 2348 40 13 3 chr5 3944616 3944914 -195685236 + AluY SINE Alu 1 301 -10 2602 83 13 44 chr5 3944914 3945081 -195685069 - THE1C LTR MaLR -203 172 1 1084 216 194 14 chr5 3945177 3945542 -195684608 - MER74B LTR ERVL 0 622 192 941 172 0 0 chr5 3945646 3945803 -195684347 - MLT1B LTR MaLR -42 348 192 1565 185 3 20 chr5 3945986 3946169 -195683981 - AluSx SINE Alu -21 291 113 2260 107 51 23 chr5 3946169 3946523 -195683627 - THE1B LTR MaLR 0 364 1 1565 185 3 20 chr5 3946523 3946631 -195683519 - AluSx SINE Alu -199 113 5 2089 124 3 0 chr5 3946866 3947172 -195682978 - AluSx SINE Alu -5 307 1 1728 129 0 15 chr5 3947181 3947445 -195682705 - AluSx SINE Alu -11 301 42 1031 166 0 0 chr5 3948190 3948365 -195681785 + FRAM SINE Alu 1 172 -4 607 166 31 43 chr5 3948365 3948512 -195681638 - MER3 DNA MER1_type -81 128 1 2296 82 10 3 chr5 3948550 3948856 -195681294 + AluSx SINE Alu 1 308 -4 780 217 12 6 chr5 3949101 3949262 -195680888 - MER58A DNA MER1_type -32 192 31 2026 121 27 0 chr5 3950256 3950553 -195679597 + AluSx SINE Alu 1 305 -7 1412 155 64 4 chr5 3950556 3950820 -195679330 - L1MB7 LINE L1 -22 6162 5883 1388 221 105 41 chr5 3950829 3951096 -195679054 - MSTD LTR MaLR -11 385 88 1448 123 0 120 chr5 3951096 3951437 -195678713 - AluSg SINE Alu 0 300 1 1388 221 105 41 chr5 3951437 3951531 -195678619 - MSTD LTR MaLR -308 88 1 1863 168 10 54 chr5 3951531 3951750 -195678400 - L1MB7 LINE L1 -291 5893 5697 1845 161 3 0 chr5 3951750 3952061 -195678089 - AluJo SINE Alu 0 312 1 1863 168 10 54 chr5 3952061 3952229 -195677921 - L1MB7 LINE L1 -487 5697 5523 284 0 28 0 chr5 3952330 3952366 -195677784 + (GAAA)n Simple_repeat Simple_repeat 4 40 0 258 312 74 40 chr5 3952608 3952810 -195677340 - MIR SINE MIR -7 255 47 30 45 0 0 chr5 3953848 3953892 -195676258 + AT_rich Low_complexity Low_complexity 1 44 0 3530 192 41 15 chr5 3953958 3954709 -195675441 - L1MA9 LINE L1 -38 6274 5504 266 225 14 14 chr5 3955217 3955288 -195674862 + MER103 DNA DNA 16 86 -80 522 280 108 20 chr5 3955915 3956165 -195673985 - L2 LINE L2 0 3313 3042 1586 266 132 48 chr5 3956297 3956791 -195673359 + MER69B DNA AcHobo 173 624 -1902 2138 69 49 0 chr5 3956791 3957079 -195673071 - AluY SINE Alu -9 302 1 1586 266 132 48 chr5 3957079 3957514 -195672636 + MER69B DNA AcHobo 624 1180 -46 2069 137 39 28 chr5 3957717 3958154 -195671996 + L1PA16 LINE L1 5725 6166 0 2084 139 0 0 chr5 3958260 3958570 -195671580 - AluSg SINE Alu 0 310 1 217 380 10 0 chr5 3960323 3960423 -195669727 + MIR SINE MIR 156 256 -6 2131 125 24 40 chr5 3960940 3961317 -195668833 + THE1C LTR MaLR 3 373 -2 1308 223 3 25 chr5 3964000 3964369 -195665781 + AluJb SINE Alu 1 362 0 1321 139 9 5 chr5 3964486 3964702 -195665448 + AluSq SINE Alu 97 313 0 2495 159 10 18 chr5 3964703 3965194 -195664956 + L1PA11 LINE L1 4416 4902 -1244 1852 130 3 0 chr5 3965194 3965479 -195664671 - AluSx SINE Alu 0 312 27 6162 109 3 14 chr5 3965525 3966800 -195663350 + L1PA11 LINE L1 4894 6161 -13 2148 274 85 15 chr5 3966847 3968016 -195662134 + L1MC1 LINE L1 2207 3456 -2690 341 280 21 0 chr5 3968026 3968119 -195662031 + MER2 DNA MER2_type 1 95 -250 224 185 31 0 chr5 3968123 3968188 -195661962 + (TA)n Simple_repeat Simple_repeat 1 67 0 367 186 0 0 chr5 3968278 3968337 -195661813 - MER2 DNA MER2_type -286 59 1 * 448 241 154 23 chr5 3968337 3968556 -195661594 + MER2 DNA MER2_type 97 344 -1 212 161 48 0 chr5 3969088 3969150 -195661000 + (TA)n Simple_repeat Simple_repeat 1 65 0 359 203 0 0 chr5 3969240 3969299 -195660851 - MER2 DNA MER2_type -286 59 1 * 420 241 176 23 chr5 3969299 3969514 -195660636 + MER2 DNA MER2_type 97 344 -1 4929 237 24 30 chr5 3969522 3970971 -195659179 + L1MC1 LINE L1 3480 4919 -1227 3833 190 44 17 chr5 3970977 3971934 -195658216 + L1MC1 LINE L1 5083 6063 -270 478 258 33 0 chr5 3971943 3972063 -195658087 - MER69 DNA AcHobo -1064 162 39 455 167 20 0 chr5 3975844 3976042 -195654108 - L1MA4A LINE L1 -4 6299 6037 2293 114 2 48 chr5 3976169 3976589 -195653561 - L1PA11 LINE L1 -54 6120 5720 * 3886 173 11 7 chr5 3976588 3976619 -195653531 - L1MA4A LINE L1 -265 6038 6009 1462 163 37 55 chr5 3976619 3977000 -195653150 + THE1C LTR MaLR 1 374 -1 3886 173 11 7 chr5 3977000 3978114 -195652036 - L1MA4A LINE L1 -294 6009 4885 2265 107 3 3 chr5 3981863 3982162 -195647988 + AluSq SINE Alu 1 299 -14 479 280 81 5 chr5 3982584 3982770 -195647380 + MER3 DNA MER1_type 6 205 -4 739 160 35 0 chr5 3983000 3983259 -195646891 + (TCTA)n Simple_repeat Simple_repeat 1 268 0 336 323 134 8 chr5 3983260 3983632 -195646518 + L1ME4a LINE L1 5555 5973 -148 4214 180 42 37 chr5 3985934 3987313 -195642837 + L1MA7 LINE L1 4901 6290 -1 552 306 69 26 chr5 3987529 3987918 -195642232 - MLT1I LTR MaLR -3 406 1 574 284 101 45 chr5 3987946 3988301 -195641849 + MLT1L LTR MaLR 241 615 0 883 295 157 14 chr5 3989971 3990398 -195639752 + MLT1D LTR MaLR 1 488 -17 2574 153 0 16 chr5 3991979 3992410 -195637740 + MSTA LTR MaLR 1 424 -4 666 189 0 0 chr5 3992432 3992543 -195637607 + FLAM_C SINE Alu 5 115 -18 413 19 19 0 chr5 3992562 3992616 -195637534 + (TAGA)n Simple_repeat Simple_repeat 3 57 0 279 0 0 0 chr5 3992615 3992646 -195637504 + (TC)n Simple_repeat Simple_repeat 2 32 0 * 234 0 0 0 chr5 3992645 3992671 -195637479 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 243 0 0 0 chr5 3992670 3992697 -195637453 + (GA)n Simple_repeat Simple_repeat 2 28 0 340 347 34 29 chr5 3993380 3993619 -195636531 + L1MC4a LINE L1 5645 5884 -1924 373 303 23 8 chr5 3994154 3994286 -195635864 + MER94 DNA DNA 1 134 0 269 276 17 60 chr5 3994350 3994466 -195635684 + L2 LINE L2 3203 3313 0 280 344 104 6 chr5 3994798 3994961 -195635189 + MER5A DNA MER1_type 7 185 -4 1278 228 155 54 chr5 3995708 3996134 -195634016 + MLT2B1 LTR ERVL 2 470 -50 258 91 91 0 chr5 3996170 3996214 -195633936 + MLT2D LTR ERVL 367 414 0 305 254 155 21 chr5 3998176 3998253 -195631897 - LTR50 LTR ERVL -2 793 728 1884 211 30 30 chr5 3998253 3998717 -195631433 + MLT1C LTR MaLR 4 467 0 305 254 155 21 chr5 3998717 3998832 -195631318 - LTR50 LTR ERVL -67 728 575 516 294 21 6 chr5 3999564 3999744 -195630406 + MLT1B LTR MaLR 189 382 -8 21 57 0 0 chr5 4001530 4001565 -195628585 + AT_rich Low_complexity Low_complexity 1 35 0 194 0 39 0 chr5 4001915 4001941 -195628209 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 210 265 0 36 chr5 4004650 4004733 -195625417 + C-rich Low_complexity Low_complexity 4 83 0 183 176 29 15 chr5 4008167 4008235 -195621915 + G-rich Low_complexity Low_complexity 3 71 0 29 28 0 0 chr5 4008406 4008442 -195621708 + GC_rich Low_complexity Low_complexity 1 36 0 36 102 0 0 chr5 4008589 4008716 -195621434 + GC_rich Low_complexity Low_complexity 1 127 0 224 149 21 0 chr5 4011597 4011644 -195618506 + CT-rich Low_complexity Low_complexity 1 48 0 25 65 0 0 chr5 4012403 4012449 -195617701 + GC_rich Low_complexity Low_complexity 1 46 0 291 113 0 0 chr5 4013888 4013941 -195616209 + (TG)n Simple_repeat Simple_repeat 1 53 0 235 291 0 29 chr5 4015387 4015490 -195614660 + (CGGGG)n Simple_repeat Simple_repeat 5 104 0 692 244 122 13 chr5 4018431 4018661 -195611489 - ORSL DNA AcHobo -17 258 4 311 0 26 0 chr5 4019513 4019552 -195610598 + (TG)n Simple_repeat Simple_repeat 2 41 0 21 0 0 0 chr5 4020052 4020073 -195610077 + AT_rich Low_complexity Low_complexity 1 21 0 194 62 31 0 chr5 4022752 4022784 -195607366 + (TG)n Simple_repeat Simple_repeat 1 33 0 371 254 59 25 chr5 4022917 4023035 -195607115 - MER5A DNA MER1_type -35 154 33 22 35 0 0 chr5 4023748 4023777 -195606373 + AT_rich Low_complexity Low_complexity 1 29 0 2158 127 0 19 chr5 4024097 4024412 -195605738 + AluSx SINE Alu 1 309 -3 479 94 0 0 chr5 4024470 4024534 -195605616 - AluSq/x SINE Alu -184 129 66 542 151 0 0 chr5 4024635 4024721 -195605429 + AluSg/x SINE Alu 213 298 -12 1496 174 89 11 chr5 4026972 4027253 -195602897 - AluJo SINE Alu -3 309 7 416 291 135 38 chr5 4027581 4027921 -195602229 + L3 LINE CR1 1204 1576 -1 540 258 56 50 chr5 4033492 4033690 -195596460 + MER20 DNA MER1_type 17 215 -4 277 176 69 98 chr5 4034235 4034337 -195595813 + MIR SINE MIR 38 136 -72 198 103 0 0 chr5 4036512 4036541 -195593609 + (TA)n Simple_repeat Simple_repeat 1 29 0 351 326 40 0 chr5 4036654 4036878 -195593272 + L1ME4a LINE L1 5710 5942 -179 2297 125 8 40 chr5 4037702 4038078 -195592072 - THE1B LTR MaLR 0 364 1 1998 157 3 6 chr5 4038759 4039072 -195591078 - AluJb SINE Alu 0 312 1 775 311 136 44 chr5 4040088 4041147 -195589003 + L2 LINE L2 1478 2633 -681 189 0 0 0 chr5 4041250 4041271 -195588879 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 541 187 60 26 chr5 4041409 4041678 -195588472 + MLT1A1 LTR MaLR 12 353 -12 228 310 60 69 chr5 4041907 4042023 -195588127 - MIR SINE MIR -88 174 60 336 270 173 9 chr5 4042032 4042350 -195587800 - LTR16A LTR ERVL -15 435 66 288 0 0 0 chr5 4043896 4043928 -195586222 + (GA)n Simple_repeat Simple_repeat 1 32 0 204 129 81 16 chr5 4044256 4044318 -195585832 + CT-rich Low_complexity Low_complexity 2 67 0 403 209 18 0 chr5 4044432 4044542 -195585608 + CT-rich Low_complexity Low_complexity 4 115 0 304 264 19 38 chr5 4044555 4044661 -195585489 - L1M4 LINE L1 -2962 3184 3081 234 0 0 0 chr5 4044662 4044688 -195585462 + (TC)n Simple_repeat Simple_repeat 1 26 0 1487 194 33 33 chr5 4044690 4044989 -195585161 - AluJb SINE Alu -12 300 2 194 318 15 15 chr5 4045621 4045687 -195584463 - L2 LINE L2 -3 3269 3204 198 305 19 110 chr5 4045716 4045789 -195584361 + L2 LINE L2 2453 2507 -807 1977 113 0 39 chr5 4045789 4046095 -195584055 - AluSc SINE Alu 0 303 9 198 305 19 110 chr5 4046095 4046174 -195583976 + L2 LINE L2 2507 2592 -722 1711 158 15 75 chr5 4047046 4047230 -195582920 + MLT1B LTR MaLR 1 148 -242 2298 88 0 14 chr5 4047230 4047527 -195582623 + AluY SINE Alu 1 293 -18 1711 158 15 75 chr5 4047527 4047753 -195582397 + MLT1B LTR MaLR 148 386 -4 1402 211 62 9 chr5 4048180 4048516 -195581634 + MLT1A1 LTR MaLR 12 365 0 734 222 48 0 chr5 4048566 4048755 -195581395 + L1MC1 LINE L1 6129 6326 -7 576 289 10 102 chr5 4049811 4050709 -195579441 + TAR1 Satellite telomeric 1 816 -777 442 263 70 36 chr5 4051014 4051242 -195578908 - MLT1D LTR MaLR 0 467 261 1852 204 13 35 chr5 4051292 4051743 -195578407 - L1MB1 LINE L1 -39 6129 5689 433 244 19 39 chr5 4051739 4051940 -195578210 + L1M4c LINE L1 2163 2365 -3781 * 344 167 0 0 chr5 4051923 4051989 -195578161 + L1M2 LINE L1 5590 5655 -636 * 2048 152 0 10 chr5 4052019 4052321 -195577829 - AluSx SINE Alu -13 299 1 525 222 58 58 chr5 4052326 4052515 -195577635 - MLT1D LTR MaLR -313 192 4 2211 100 14 0 chr5 4052902 4053193 -195576957 - AluSc SINE Alu -14 295 1 326 262 6 139 chr5 4053491 4053663 -195576487 - MER5A DNA MER1_type -2 187 39 282 204 0 0 chr5 4110740 4110789 -195519361 - L1MA7 LINE L1 -225 6066 6018 2127 104 0 3 chr5 4110806 4111105 -195519045 - AluSx SINE Alu -13 299 2 1113 216 69 69 chr5 4111340 4111390 -195518760 + LTR16A1 LTR ERVL 56 105 -352 3160 174 37 29 chr5 4111390 4111984 -195518166 - LTR24C LTR ERV1 0 635 34 1449 192 7 23 chr5 4111984 4112286 -195517864 - AluJo SINE Alu -15 297 1 3160 174 37 29 chr5 4112286 4112317 -195517833 - LTR24C LTR ERV1 -601 34 5 1113 216 69 69 chr5 4112317 4112613 -195517537 + LTR16A1 LTR ERVL 104 402 -55 183 80 0 0 chr5 4112808 4112833 -195517317 + (ATG)n Simple_repeat Simple_repeat 2 26 0 803 146 0 31 chr5 4112857 4112987 -195517163 - FLAM_C SINE Alu -6 127 2 2269 141 11 0 chr5 4113441 4113789 -195516361 + L1PA12 LINE L1 5569 5920 -248 2205 99 0 0 chr5 4113789 4114083 -195516067 - AluSx SINE Alu -18 294 1 1521 139 51 0 chr5 4114105 4114378 -195515772 - L1MA9 LINE L1 -8 6304 6018 865 94 0 36 chr5 4114398 4114536 -195515614 - FLAM_C SINE Alu 0 133 1 556 122 28 19 chr5 4114538 4114628 -195515522 - Tigger3(Golem) DNA MER2_type -544 2485 2392 2087 106 3 7 chr5 4114628 4114930 -195515220 - AluSq SINE Alu -12 301 1 556 122 28 19 chr5 4114930 4114946 -195515204 - Tigger3(Golem) DNA MER2_type -637 2392 2378 853 208 0 7 chr5 4114956 4115105 -195515045 - Tigger3(Golem) DNA MER2_type -2881 148 1 2146 145 62 31 chr5 4115356 4115776 -195514374 + Tigger2a DNA MER2_type 2 434 0 216 97 0 0 chr5 4116470 4116501 -195513649 + (CGCGG)n Simple_repeat Simple_repeat 1 31 0 2307 89 0 0 chr5 4117187 4117491 -195512659 + AluSx SINE Alu 1 304 -8 2243 100 0 0 chr5 4118054 4118354 -195511796 - AluSx SINE Alu -12 300 1 200 369 63 9 chr5 4118431 4118542 -195511608 - L2 LINE L2 -6 3307 3191 2089 124 3 0 chr5 4118884 4119190 -195510960 - AluSx SINE Alu -5 307 1 1728 129 0 15 chr5 4119199 4119463 -195510687 - AluSx SINE Alu -11 301 42 1119 166 0 0 chr5 4120208 4120383 -195509767 + FRAM SINE Alu 1 172 -4 607 163 32 46 chr5 4120383 4120530 -195509620 - MER3 DNA MER1_type -63 146 1 2449 82 10 3 chr5 4120568 4120874 -195509276 + AluSx SINE Alu 1 308 -4 732 217 12 6 chr5 4121119 4121280 -195508870 - MER58A DNA MER1_type -32 192 31 2173 121 27 0 chr5 4122274 4122571 -195507579 + AluSx SINE Alu 1 305 -7 1336 159 64 4 chr5 4122574 4122838 -195507312 - L1MB7 LINE L1 -22 6162 5883 1299 227 106 28 chr5 4122847 4123109 -195507041 - MSTD LTR MaLR -11 385 86 2351 112 0 0 chr5 4123109 4123414 -195506736 - AluSg SINE Alu -5 305 1 1299 227 106 28 chr5 4123414 4123508 -195506642 - MSTD LTR MaLR -310 86 1 1944 171 9 50 chr5 4123508 4123727 -195506423 - L1MB7 LINE L1 -291 5893 5698 1999 161 3 0 chr5 4123727 4124038 -195506112 - AluJo SINE Alu 0 312 1 1944 171 9 50 chr5 4124038 4124240 -195505910 - L1MB7 LINE L1 -486 5698 5489 2258 92 45 3 chr5 4124481 4124773 -195505377 + AluSx SINE Alu 1 304 -8 1273 129 0 0 chr5 4124773 4124943 -195505207 + AluSg/x SINE Alu 134 303 -9 2366 90 0 10 chr5 4124946 4125246 -195504904 + AluSg1 SINE Alu 12 308 -1 192 125 0 0 chr5 4125271 4125303 -195504847 + (TA)n Simple_repeat Simple_repeat 2 33 0 212 220 0 20 chr5 4125441 4125491 -195504659 + (TA)n Simple_repeat Simple_repeat 1 49 0 1818 125 0 4 chr5 4125819 4126067 -195504083 - AluSx SINE Alu -17 295 49 1746 156 0 51 chr5 4126360 4126674 -195503476 - AluJo SINE Alu -14 298 1 495 186 88 0 chr5 4127398 4127511 -195502639 - HAL1 LINE L1 -754 1753 1631 1126 177 4 44 chr5 4127581 4127807 -195502343 - AluJo SINE Alu -9 303 87 197 331 24 113 chr5 4128198 4128322 -195501828 - MIR SINE MIR -148 114 2 1682 180 7 26 chr5 4128586 4128892 -195501258 + AluJo SINE Alu 1 300 -12 186 174 184 82 chr5 4128985 4129056 -195501094 + L2 LINE L2 3202 3287 -26 2622 83 13 44 chr5 4129056 4129275 -195500875 - THE1C LTR MaLR 0 375 172 2681 27 7 3 chr5 4129275 4129575 -195500575 + AluY SINE Alu 1 301 -10 2622 83 13 44 chr5 4129575 4129742 -195500408 - THE1C LTR MaLR -203 172 1 186 174 184 82 chr5 4129742 4129768 -195500382 + L2 LINE L2 3287 3309 -4 1012 223 195 11 chr5 4129838 4130202 -195499948 - MER74B LTR ERVL 0 622 192 907 166 0 0 chr5 4130306 4130463 -195499687 - MLT1B LTR MaLR -42 348 192 1811 175 3 20 chr5 4130646 4130829 -195499321 - AluSx SINE Alu -21 291 113 2254 107 51 25 chr5 4130829 4131184 -195498966 - THE1B LTR MaLR 0 364 1 1811 175 3 20 chr5 4131184 4131292 -195498858 - AluSx SINE Alu -199 113 5 1860 138 97 13 chr5 4131973 4132284 -195497866 + MER1B DNA MER1_type 1 337 0 404 319 129 5 chr5 4132377 4132587 -195497563 + L2 LINE L2 2484 2719 -595 1562 167 24 37 chr5 4133476 4133770 -195496380 + AluJo SINE Alu 1 290 -22 2699 45 0 0 chr5 4133895 4134204 -195495946 - AluY SINE Alu -2 309 1 2453 97 0 0 chr5 4134352 4134661 -195495489 - AluSx SINE Alu -3 309 1 473 198 47 0 chr5 4134932 4135038 -195495112 - MER20 DNA MER1_type -16 203 93 2045 153 18 45 chr5 4135047 4135271 -195494879 - MLT1B LTR MaLR -2 388 178 2504 102 123 5 chr5 4135271 4135653 -195494497 + MSTA LTR MaLR 1 427 -1 2045 153 18 45 chr5 4135653 4135827 -195494323 - MLT1B LTR MaLR -212 178 1 1148 233 76 22 chr5 4135869 4136225 -195493925 + MLT1B LTR MaLR 1 375 -15 267 30 0 0 chr5 4136237 4136270 -195493880 - MER20 DNA MER1_type -162 57 25 243 377 50 23 chr5 4136338 4136680 -195493470 - L2 LINE L2 -339 2975 2625 554 203 73 0 chr5 4136724 4136847 -195493303 - MER68 LTR ERV1 0 562 431 2316 126 0 3 chr5 4136850 4137160 -195492990 + AluSx SINE Alu 2 310 -2 1577 179 90 18 chr5 4137161 4137327 -195492823 - MSTB1 LTR MaLR -59 373 220 186 43 0 0 chr5 4137327 4137350 -195492800 + (GGGAA)n Simple_repeat Simple_repeat 1 23 0 1577 179 90 18 chr5 4137350 4137518 -195492632 - MSTB1 LTR MaLR -212 220 15 1200 171 18 0 chr5 4137518 4137735 -195492415 - MER68 LTR ERV1 -341 221 1 1561 125 79 0 chr5 4137771 4138011 -195492139 + AluJo SINE Alu 31 289 -23 279 294 160 17 chr5 4138071 4138190 -195491960 - L2 LINE L2 0 3272 3137 2088 128 0 10 chr5 4138582 4138880 -195491270 - AluSx SINE Alu -17 295 1 1291 206 88 28 chr5 4138892 4139280 -195490870 - MLT1C LTR MaLR -56 411 1 1676 154 59 131 chr5 4139280 4139722 -195490428 - MLT1C-int LTR MaLR 0 1371 962 1794 174 3 13 chr5 4140039 4140338 -195489812 + AluJo SINE Alu 1 296 -16 1068 179 111 46 chr5 4140536 4140887 -195489263 + MLT1C LTR MaLR 1 374 -93 213 39 0 0 chr5 4140988 4141014 -195489136 + (TG)n Simple_repeat Simple_repeat 1 26 0 303 280 0 0 chr5 4141089 4141232 -195488918 + (TG)n Simple_repeat Simple_repeat 2 144 0 1943 168 3 3 chr5 4142207 4142511 -195487639 - AluJb SINE Alu -8 304 1 198 240 93 27 chr5 4142646 4142721 -195487429 - L2 LINE L2 -42 3271 3192 610 294 102 55 chr5 4144163 4144507 -195485643 - L1M4 LINE L1 -3411 2735 2376 549 286 52 31 chr5 4144530 4144722 -195485428 - MIR SINE MIR 0 262 67 243 103 0 0 chr5 4144766 4144805 -195485345 + (T)n Simple_repeat Simple_repeat 1 39 0 355 220 119 8 chr5 4144875 4145193 -195484957 - L1MC3 LINE L1 -114 6048 5732 * 1228 175 0 87 chr5 4145188 4145522 -195484628 - L1MA8 LINE L1 -296 5866 5560 377 292 11 22 chr5 4146510 4146688 -195483462 - L1M4 LINE L1 -3108 3038 2863 726 179 14 0 chr5 4146711 4146851 -195483299 - L1ME2 LINE L1 -9 6155 6014 2338 108 0 3 chr5 4147088 4147394 -195482756 + AluSx SINE Alu 1 305 -7 1895 103 0 8 chr5 4147561 4147803 -195482347 - AluSc SINE Alu -69 240 1 1728 183 16 21 chr5 4147804 4148187 -195481963 - L1MA8 LINE L1 -1156 4990 4610 915 222 36 0 chr5 4148177 4148402 -195481748 - L1M4 LINE L1 -1598 4548 4316 * 2258 110 3 0 chr5 4248785 4249093 -195381057 + AluSc SINE Alu 1 309 0 25 0 0 0 chr5 4249267 4249292 -195380858 + AT_rich Low_complexity Low_complexity 1 25 0 946 53 26 7 chr5 4249376 4249527 -195380623 + (TAGA)n Simple_repeat Simple_repeat 2 155 0 227 323 23 0 chr5 4249648 4249778 -195380372 - L2 LINE L2 -1635 1679 1547 208 143 0 0 chr5 4250055 4250090 -195380060 + (TTA)n Simple_repeat Simple_repeat 3 37 0 955 256 32 18 chr5 4250430 4250715 -195379435 - L1MD1 LINE L1 -170 6072 5784 1781 243 92 66 chr5 4251416 4252487 -195377663 + L1ME2 LINE L1 5045 6156 -8 25 31 0 0 chr5 4252573 4252605 -195377545 + AT_rich Low_complexity Low_complexity 1 32 0 277 311 86 8 chr5 4252808 4253065 -195377085 + L1ME4a LINE L1 2279 2555 -3591 295 173 123 48 chr5 4253210 4253408 -195376742 + MER5C DNA MER1_type 47 323 -1 232 295 36 7 chr5 4253409 4253548 -195376602 + L1ME4a LINE L1 2689 2831 -3315 543 271 74 17 chr5 4253836 4254217 -195375933 + L1ME4a LINE L1 5209 5607 -555 6477 67 26 1 chr5 4254334 4255999 -195374151 + L1PA7 LINE L1 4455 6154 0 2027 127 0 7 chr5 4256172 4256464 -195373686 + AluSx SINE Alu 1 290 -22 918 121 0 73 chr5 4258688 4258853 -195371297 + Charlie3 DNA MER1_type 2550 2702 -8 311 279 16 16 chr5 4258880 4259002 -195371148 + L1ME4a LINE L1 5762 5883 -238 372 309 90 18 chr5 4260414 4260637 -195369513 - MLT1J2 LTR MaLR -158 292 54 1142 224 86 45 chr5 4261155 4261315 -195368835 + L1MC1 LINE L1 4341 4493 -1653 2045 93 0 0 chr5 4261315 4261603 -195368547 + AluSq SINE Alu 35 322 0 1142 224 86 45 chr5 4261603 4261906 -195368244 + L1MC1 LINE L1 4493 4824 -1322 4628 153 31 7 chr5 4261934 4262802 -195367348 + L1MC1 LINE L1 5356 6244 -89 2306 128 0 0 chr5 4263488 4263800 -195366350 - AluSx SINE Alu 0 312 1 297 311 37 6 chr5 4263938 4264102 -195366048 + LTR16A LTR ERVL 205 373 -77 2343 60 0 3 chr5 4264236 4264557 -195365593 - AluY SINE Alu 0 320 1 286 229 42 42 chr5 4264754 4264898 -195365252 - L1MCc LINE L1 -6256 167 24 1272 132 0 0 chr5 4266320 4266502 -195363648 + AluSg/x SINE Alu 131 312 0 21 0 0 0 chr5 4267014 4267035 -195363115 + AT_rich Low_complexity Low_complexity 1 21 0 748 207 17 17 chr5 4267267 4267441 -195362709 + MLT1A2 LTR MaLR 1 174 -200 235 208 0 0 chr5 4267457 4267510 -195362640 + CT-rich Low_complexity Low_complexity 1 53 0 1826 234 42 22 chr5 4267636 4268088 -195362062 + MLT1A2-int LTR MaLR 1271 1731 -4 1246 243 38 30 chr5 4268092 4268463 -195361687 + MLT1A2 LTR MaLR 1 374 0 328 273 79 36 chr5 4270109 4270248 -195359902 - MIR SINE MIR -1 261 117 359 179 64 0 chr5 4270560 4270638 -195359512 - L1MC1 LINE L1 -8 6325 6243 1507 115 42 0 chr5 4270640 4270857 -195359293 + THE1B LTR MaLR 1 226 -138 2071 108 0 10 chr5 4271406 4271702 -195358448 - AluSc SINE Alu -16 293 1 2136 66 0 0 chr5 4272816 4273088 -195357062 - AluY SINE Alu -6 305 34 21 57 0 0 chr5 4273210 4273245 -195356905 + AT_rich Low_complexity Low_complexity 1 35 0 1897 136 0 0 chr5 4274979 4275252 -195354898 + AluSg SINE Alu 1 273 -37 246 309 59 26 chr5 4275306 4275458 -195354692 - LTR67 LTR ERVL -255 302 146 * 247 182 121 30 chr5 4275416 4275482 -195354668 - MLT1K LTR MaLR -325 263 192 234 91 0 0 chr5 4276321 4276354 -195353796 + (GAAAA)n Simple_repeat Simple_repeat 2 34 0 499 339 47 4 chr5 4276495 4276731 -195353419 - L1M4 LINE L1 -1273 4873 4628 289 291 11 60 chr5 4276779 4276992 -195353158 - L1MDb LINE L1 -5008 1401 1202 1350 218 92 12 chr5 4276992 4277327 -195352823 + MLT1A1 LTR MaLR 4 365 0 289 291 11 60 chr5 4277327 4277381 -195352769 - L1MDb LINE L1 -5207 1202 1147 24471 128 16 77 chr5 4278358 4281402 -195348748 + L1P LINE L1 12 2676 -3470 2151 113 0 0 chr5 4281402 4281703 -195348447 + AluY SINE Alu 1 301 -10 24471 128 16 77 chr5 4281703 4283324 -195346826 + L1P LINE L1 2676 4394 -1752 206 45 15 159 chr5 4283493 4283694 -195346456 + (CACAT)n Simple_repeat Simple_repeat 5 176 0 270 29 0 162 chr5 4283712 4283916 -195346234 + (CACAT)n Simple_repeat Simple_repeat 1 171 0 * 376 364 0 0 chr5 4283782 4284080 -195346070 + C-rich Low_complexity Low_complexity 1 298 0 3726 47 0 4 chr5 4285942 4286392 -195343758 - LTR7 LTR ERV1 -2 448 1 1525 171 25 0 chr5 4286721 4287002 -195343148 + AluJb SINE Alu 1 288 -24 269 176 29 0 chr5 4287002 4287070 -195343080 + (TA)n Simple_repeat Simple_repeat 1 70 0 309 295 76 63 chr5 4287075 4287312 -195342838 - L1MCa LINE L1 -4212 2214 1975 646 272 55 10 chr5 4289321 4289523 -195340627 + MIR SINE MIR 51 261 -1 1495 82 5 0 chr5 4290097 4290303 -195339847 - AluY SINE Alu -94 217 11 22 56 0 0 chr5 4290437 4290473 -195339677 + AT_rich Low_complexity Low_complexity 1 36 0 2194 89 3 0 chr5 4290939 4291230 -195338920 + AluSp SINE Alu 1 292 -21 23 0 0 0 chr5 4291246 4291269 -195338881 + AT_rich Low_complexity Low_complexity 1 23 0 244 373 73 0 chr5 4291675 4291830 -195338320 + MIR SINE MIR 18 183 -58 28 0 0 0 chr5 4293349 4293377 -195336773 + AT_rich Low_complexity Low_complexity 1 28 0 264 314 34 3 chr5 4294120 4294222 -195335928 + MIR SINE MIR 31 134 -74 1996 120 6 28 chr5 4294495 4294812 -195335338 + AluSx SINE Alu 1 310 -2 359 288 155 30 chr5 4299208 4299614 -195330536 + L1ME4a LINE L1 5426 5882 -239 222 205 0 0 chr5 4300870 4300909 -195329241 + A-rich Low_complexity Low_complexity 5 43 0 601 203 9 6 chr5 4301042 4301389 -195328761 + (TCCA)n Simple_repeat Simple_repeat 1 347 0 388 315 136 69 chr5 4301420 4302348 -195327802 - L2 LINE L2 -4 3309 2310 354 234 0 0 chr5 4303014 4303121 -195327029 + (CCCA)n Simple_repeat Simple_repeat 3 109 0 184 297 109 62 chr5 4303359 4303436 -195326714 - L2 LINE L2 -58 3255 3183 2393 118 28 3 chr5 4303436 4303791 -195326359 + THE1B LTR MaLR 1 364 0 184 297 109 62 chr5 4303791 4303969 -195326181 - L2 LINE L2 -130 3183 2988 306 254 127 0 chr5 4305857 4305999 -195324151 - MLT1K LTR MaLR -66 522 363 1849 124 77 41 chr5 4306975 4307337 -195322813 + THE1C LTR MaLR 1 375 0 445 265 153 58 chr5 4308029 4308292 -195321858 + L2 LINE L2 2814 3131 -182 374 68 0 17 chr5 4308292 4308351 -195321799 + (TA)n Simple_repeat Simple_repeat 2 59 0 445 265 153 58 chr5 4308351 4308498 -195321652 + L2 LINE L2 3131 3263 -50 470 316 57 19 chr5 4309694 4309906 -195320244 - MIR SINE MIR -3 259 40 291 324 46 46 chr5 4310013 4310186 -195319964 - MIR SINE MIR -42 220 48 226 143 0 0 chr5 4311589 4311624 -195318526 - MER63 DNA MER1_type -333 728 694 183 184 0 0 chr5 4313406 4313444 -195316706 + CT-rich Low_complexity Low_complexity 1 38 0 478 198 27 0 chr5 4313492 4313603 -195316547 - L1MA7 LINE L1 -2 6289 6176 3797 234 19 42 chr5 4313704 4315232 -195314918 - L1P3 LINE L1 -4735 1140 4 1585 181 14 0 chr5 4315277 4315559 -195314591 - AluSx SINE Alu -17 295 10 207 277 84 12 chr5 4316447 4316530 -195313620 - MER91A DNA MER1_type -83 113 25 192 77 0 0 chr5 4317576 4317602 -195312548 + (CA)n Simple_repeat Simple_repeat 2 27 0 516 221 0 0 chr5 4317613 4317962 -195312188 + (CA)n Simple_repeat Simple_repeat 1 349 0 462 243 0 0 chr5 4317973 4318150 -195312000 + (CA)n Simple_repeat Simple_repeat 1 177 0 393 247 0 0 chr5 4318175 4318341 -195311809 + (CA)n Simple_repeat Simple_repeat 2 167 0 195 42 0 0 chr5 4318970 4318994 -195311156 + (CAAAG)n Simple_repeat Simple_repeat 1 24 0 195 333 23 11 chr5 4320814 4320901 -195309249 + L3b LINE CR1 1111 1198 -385 31 0 0 0 chr5 4320905 4320936 -195309214 + AT_rich Low_complexity Low_complexity 1 31 0 230 339 46 15 chr5 4321703 4321833 -195308317 - L2 LINE L2 -15 3298 3165 543 233 72 22 chr5 4321997 4322177 -195307973 - L1MC4 LINE L1 -1053 6989 6801 190 342 54 27 chr5 4322783 4322894 -195307256 + MIR3 SINE MIR 42 155 -53 2649 17 3 0 chr5 4322988 4323282 -195306868 + AluY SINE Alu 1 295 -16 236 337 0 33 chr5 4324670 4324762 -195305388 - L3 LINE CR1 -161 1416 1328 230 318 16 0 chr5 4324889 4324952 -195305198 + MIR SINE MIR 85 148 -114 195 171 0 43 chr5 4325589 4325659 -195304491 + (CATATA)n Simple_repeat Simple_repeat 6 72 0 306 156 78 0 chr5 4325667 4325731 -195304419 - L1MCa LINE L1 -4362 2064 1996 1349 172 19 130 chr5 4325731 4326092 -195304058 - MER7A DNA MER2_type -16 330 12 506 257 32 30 chr5 4326198 4326211 -195303939 - L1MA7 LINE L1 -158 6133 6122 2344 85 7 0 chr5 4326211 4326504 -195303646 - AluY SINE Alu -16 295 1 506 257 32 30 chr5 4326504 4326660 -195303490 - L1MA7 LINE L1 -169 6122 5972 258 32 0 0 chr5 4326666 4326697 -195303453 + (CAAT)n Simple_repeat Simple_repeat 2 32 0 2139 116 14 0 chr5 4327102 4327394 -195302756 + AluSx SINE Alu 1 296 -16 374 282 63 14 chr5 4328031 4328173 -195301977 + MIR SINE MIR 93 241 -21 1335 177 83 0 chr5 4329069 4329334 -195300816 + MER2 DNA MER2_type 1 287 -58 2062 87 4 0 chr5 4329375 4329640 -195300510 - L1PB1 LINE L1 0 6151 5886 252 306 28 0 chr5 4329645 4329717 -195300433 + MER2 DNA MER2_type 272 345 0 327 338 46 27 chr5 4329746 4329965 -195300185 + MIR SINE MIR 29 251 -11 312 91 0 0 chr5 4330009 4330053 -195300097 + (TC)n Simple_repeat Simple_repeat 1 44 0 1739 152 28 14 chr5 4332294 4332577 -195297573 - AluJb SINE Alu -25 287 1 523 342 126 23 chr5 4332598 4333041 -195297109 - L1ME3A LINE L1 -341 5829 5330 2688 96 36 14 chr5 4333041 4333397 -195296753 - THE1B LTR MaLR 0 364 1 523 342 126 23 chr5 4333397 4333439 -195296711 - L1ME3A LINE L1 -840 5330 5294 920 194 53 119 chr5 4333750 4334070 -195296080 - MLT1A2 LTR MaLR -50 324 26 754 212 232 10 chr5 4334086 4334388 -195295762 + L1ME3 LINE L1 5780 6148 -14 826 200 0 50 chr5 4334390 4334570 -195295580 - AluJb SINE Alu -6 306 136 23 0 0 0 chr5 4334674 4334697 -195295453 + AT_rich Low_complexity Low_complexity 1 23 0 1086 159 0 37 chr5 4334697 4334886 -195295264 - L1PA16 LINE L1 -9 6157 5976 522 287 94 40 chr5 4335221 4335757 -195294393 - L1MDa LINE L1 -3550 2579 2067 297 272 57 57 chr5 4336060 4336469 -195293681 - L1MDa LINE L1 -920 1609 1415 440 287 52 55 chr5 4336544 4336906 -195293244 - L1MDa LINE L1 -4864 1255 895 232 328 26 70 chr5 4337007 4337278 -195292872 - L1MDa LINE L1 -5301 818 560 1677 266 26 6 chr5 4337291 4337757 -195292393 - L1MD3 LINE L1 -10 7985 7511 368 339 23 0 chr5 4337768 4337898 -195292252 - L1MDa LINE L1 -5562 557 425 227 262 0 0 chr5 4338182 4338243 -195291907 - LTR66 LTR ERVL -152 458 398 27 29 0 0 chr5 4338247 4338281 -195291869 + AT_rich Low_complexity Low_complexity 1 34 0 24 0 0 0 chr5 4338346 4338370 -195291780 + AT_rich Low_complexity Low_complexity 1 24 0 451 272 111 14 chr5 4338375 4338592 -195291558 + L1ME4a LINE L1 5636 5873 -248 477 244 134 0 chr5 4342136 4342308 -195287842 + MLT2F LTR ERVL 461 655 -8 524 236 6 0 chr5 4342339 4342517 -195287633 + (TG)n Simple_repeat Simple_repeat 1 179 0 1833 108 8 8 chr5 4344189 4344449 -195285701 - AluSg SINE Alu -19 291 32 2319 225 49 24 chr5 4346637 4347251 -195282899 + L1MB3 LINE L1 5539 6167 -16 203 146 24 0 chr5 4347292 4347333 -195282817 + CT-rich Low_complexity Low_complexity 1 42 0 681 171 28 6 chr5 4347361 4347537 -195282613 + CT-rich Low_complexity Low_complexity 1 180 0 255 195 0 0 chr5 4347537 4347578 -195282572 + polypyrimidine Low_complexity Low_complexity 1 41 0 749 165 24 10 chr5 4347578 4347846 -195282304 + CT-rich Low_complexity Low_complexity 1 271 0 896 140 11 11 chr5 4347874 4348053 -195282097 + CT-rich Low_complexity Low_complexity 2 180 0 419 132 0 85 chr5 4348341 4348447 -195281703 - L1MA7 LINE L1 -1 6290 6194 1217 273 52 11 chr5 4348547 4349009 -195281141 - L1M4 LINE L1 -1160 4986 4506 485 303 50 54 chr5 4349335 4349632 -195280518 - HAL1 LINE L1 -842 1665 1370 564 309 12 0 chr5 4349947 4350112 -195280038 + MIR SINE MIR 32 198 -64 237 118 0 0 chr5 4350621 4350655 -195279495 + (TC)n Simple_repeat Simple_repeat 1 34 0 342 242 13 19 chr5 4350656 4350813 -195279337 + CT-rich Low_complexity Low_complexity 4 159 0 2043 129 3 0 chr5 4352105 4352400 -195277750 + AluSx SINE Alu 1 296 -16 319 132 55 0 chr5 4352426 4352517 -195277633 + (TA)n Simple_repeat Simple_repeat 1 96 0 21 0 0 0 chr5 4352713 4352734 -195277416 + AT_rich Low_complexity Low_complexity 1 21 0 479 268 157 25 chr5 4354952 4355150 -195275000 + MIR SINE MIR 10 233 -29 1628 213 7 34 chr5 4355334 4355775 -195274375 + MLT2B3 LTR ERVL 5 481 -34 700 152 30 0 chr5 4355796 4355961 -195274189 + (TCTA)n Simple_repeat Simple_repeat 4 173 0 681 184 11 17 chr5 4355984 4356163 -195273987 + (TCTA)n Simple_repeat Simple_repeat 3 180 0 197 65 32 0 chr5 4356186 4356217 -195273933 + (TTTC)n Simple_repeat Simple_repeat 1 32 0 583 196 13 0 chr5 4356236 4356389 -195273761 + (TCTA)n Simple_repeat Simple_repeat 3 157 0 325 117 17 33 chr5 4356390 4356450 -195273700 + MLT2B3 LTR ERVL 462 554 0 207 69 0 0 chr5 4356970 4356999 -195273151 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 22 0 0 0 chr5 4357568 4357590 -195272560 + AT_rich Low_complexity Low_complexity 1 22 0 884 241 50 70 chr5 4357829 4358334 -195271816 + MER34 LTR ERV1 6 585 0 379 236 36 9 chr5 4359151 4359261 -195270889 + MARNA DNA Mariner 266 378 -208 2271 100 0 13 chr5 4360031 4360340 -195269810 - AluSx SINE Alu -7 305 1 622 197 61 14 chr5 4361508 4361655 -195268495 + MLT1B LTR MaLR 8 161 -229 2743 89 22 32 chr5 4361662 4362067 -195268083 - L1PA13 LINE L1 0 6163 5763 1137 194 0 0 chr5 4362067 4362289 -195267861 + L1P LINE L1 5174 5395 -751 895 204 33 50 chr5 4362289 4362529 -195267621 + MLT1B LTR MaLR 143 378 -12 9391 164 21 5 chr5 4362726 4362746 -195267404 - L1P LINE L1 -2743 3403 3385 7353 131 10 51 chr5 4362746 4363444 -195266706 - L1PA10 LINE L1 0 6168 5443 613 100 0 0 chr5 4363444 4363524 -195266626 - MADE1 DNA Mariner 0 80 1 7353 131 10 51 chr5 4363524 4364897 -195265253 - L1PA10 LINE L1 -725 5443 4154 9391 164 21 5 chr5 4364897 4366607 -195263543 - L1P LINE L1 -2761 3385 1645 2131 149 6 6 chr5 4366614 4366943 -195263207 - THE1B LTR MaLR 0 364 36 542 15 15 0 chr5 4369254 4369321 -195260829 + (TTTTC)n Simple_repeat Simple_repeat 3 70 0 852 153 0 22 chr5 4369322 4369505 -195260645 + CT-rich Low_complexity Low_complexity 1 179 0 2245 147 3 5 chr5 4375668 4376035 -195254115 - L1PB1 LINE L1 -3 6148 5783 378 231 0 0 chr5 4376035 4376126 -195254024 + (TG)n Simple_repeat Simple_repeat 1 91 0 1360 116 1 20 chr5 4376126 4376363 -195253787 - L1PB1 LINE L1 -359 5792 5569 613 265 0 0 chr5 4376857 4377008 -195253142 - L1MB7 LINE L1 -16 6168 6018 1657 185 0 3 chr5 4379498 4379796 -195250354 - AluJo SINE Alu -1 311 15 1848 138 10 3 chr5 4380909 4381213 -195248937 + AluSx SINE Alu 1 306 -6 268 306 70 70 chr5 4382185 4382384 -195247766 + MIR SINE MIR 13 211 -51 358 303 6 43 chr5 4382854 4383016 -195247134 + L1PA10 LINE L1 5858 6013 -155 * 1668 191 57 37 chr5 4382888 4383290 -195246860 + L1MA4A LINE L1 5888 6297 -6 297 312 6 6 chr5 4383899 4384069 -195246081 + (TA)n Simple_repeat Simple_repeat 2 171 0 267 341 16 0 chr5 4384195 4384321 -195245829 + C-rich Low_complexity Low_complexity 6 133 0 233 245 0 7 chr5 4384324 4384475 -195245675 + (CA)n Simple_repeat Simple_repeat 1 150 0 216 111 0 0 chr5 4384575 4384611 -195245539 + (CA)n Simple_repeat Simple_repeat 1 36 0 2135 118 0 0 chr5 4387280 4387586 -195242564 + AluSq SINE Alu 2 307 -6 1918 228 150 110 chr5 4390371 4390927 -195239223 - L1MC3 LINE L1 -9 7776 7244 265 245 39 59 chr5 4390927 4391029 -195239121 - MLT1F1 LTR MaLR -434 133 34 1918 228 150 110 chr5 4391029 4391423 -195238727 - L1MC3 LINE L1 -541 7244 6683 204 118 29 0 chr5 4392150 4392184 -195237966 + GA-rich Low_complexity Low_complexity 2 36 0 544 249 169 80 chr5 4392274 4392553 -195237597 + MLT1H1 LTR MaLR 14 267 -288 580 288 25 0 chr5 4392553 4392751 -195237399 + MER105 DNA DNA 2 204 0 544 249 169 80 chr5 4392751 4392957 -195237193 + MLT1H1 LTR MaLR 267 542 -13 322 265 41 0 chr5 4394070 4394168 -195235982 + MIR SINE MIR 151 252 -10 1715 173 52 30 chr5 4394959 4395324 -195234826 + THE1C LTR MaLR 1 373 -2 9491 141 16 35 chr5 4395328 4396937 -195233213 + THE1C-int LTR MaLR 3 1580 0 1492 170 38 98 chr5 4396937 4397336 -195232814 + THE1C LTR MaLR 1 375 0 493 255 59 20 chr5 4399170 4399323 -195230827 + MER70B LTR ERVL 1 159 -419 * 2116 245 21 4 chr5 4399322 4399792 -195230358 + MER70B LTR ERVL 90 567 -11 331 212 29 7 chr5 4400075 4400212 -195229938 + GA-rich Low_complexity Low_complexity 2 141 0 468 175 0 0 chr5 4400313 4400410 -195229740 + GA-rich Low_complexity Low_complexity 2 98 0 267 299 11 0 chr5 4400988 4401075 -195229075 + (CA)n Simple_repeat Simple_repeat 1 88 0 2468 36 7 10 chr5 4403686 4403988 -195226162 - AluY SINE Alu -10 301 1 1367 203 6 37 chr5 4404043 4404364 -195225786 - AluJb SINE Alu -1 311 1 2045 101 0 4 chr5 4404554 4404831 -195225319 - AluSq SINE Alu -27 286 11 1866 120 0 33 chr5 4404978 4405277 -195224873 - AluSx SINE Alu -23 289 1 26 0 0 0 chr5 4405541 4405567 -195224583 + AT_rich Low_complexity Low_complexity 1 26 0 1702 173 0 13 chr5 4406052 4406358 -195223792 + AluSx SINE Alu 1 302 -10 1643 110 0 62 chr5 4406667 4406940 -195223210 + AluSg SINE Alu 49 304 -6 345 310 192 15 chr5 4407147 4407418 -195222732 + L1M4 LINE L1 5074 5392 -754 225 282 13 13 chr5 4458449 4458546 -195171604 + GA-rich Low_complexity Low_complexity 2 149 0 558 218 3 9 chr5 4460244 4460582 -195169568 + (TA)n Simple_repeat Simple_repeat 1 335 0 340 270 22 0 chr5 4460582 4460671 -195169479 - L1MC4 LINE L1 -1337 6705 6615 312 277 0 43 chr5 4460648 4460742 -195169408 + L1MC4 LINE L1 6614 6703 -1339 * 301 209 15 0 chr5 4460682 4460749 -195169401 - L1M4b LINE L1 -4363 2594 2527 * 1046 300 159 40 chr5 4460776 4462257 -195167893 - L2 LINE L2 -4 3309 1610 290 83 0 62 chr5 4463746 4463794 -195166356 + MLT2A2 LTR ERVL 399 443 -10 3646 225 38 25 chr5 4463816 4464762 -195165388 - L1MC3 LINE L1 -1160 6625 5668 675 218 86 47 chr5 4464755 4464974 -195165176 - L1M4b LINE L1 -4792 2165 1933 * 450 0 0 0 chr5 4464974 4465024 -195165126 + (TG)n Simple_repeat Simple_repeat 1 50 0 675 218 86 47 chr5 4465024 4465061 -195165089 - L1M4b LINE L1 -5024 1933 1899 1755 276 67 88 chr5 4465115 4466076 -195164074 - L1MCa LINE L1 -5103 942 3 421 223 78 105 chr5 4466091 4466188 -195163962 - L1M4b LINE L1 -5159 1788 1690 1886 147 29 0 chr5 4466188 4466467 -195163683 + AluSx SINE Alu 3 289 -23 421 223 78 105 chr5 4466467 4466701 -195163449 - L1M4b LINE L1 -5257 1690 1339 2417 146 5 16 chr5 4466938 4467315 -195162835 - THE1C LTR MaLR -2 373 1 2609 222 88 5 chr5 4467408 4468069 -195162081 + L1MD1 LINE L1 5518 6233 -9 21 71 0 0 chr5 4468544 4468586 -195161564 + AT_rich Low_complexity Low_complexity 1 42 0 627 218 156 0 chr5 4469634 4469813 -195160337 + MER20 DNA MER1_type 1 207 -12 1604 114 76 76 chr5 4469852 4470141 -195160009 - AluSx SINE Alu -23 289 1 1343 215 0 19 chr5 4470189 4470454 -195159696 + AluJo SINE Alu 1 260 -52 277 62 42 0 chr5 4473669 4473717 -195156433 + (TC)n Simple_repeat Simple_repeat 2 51 0 21 57 0 0 chr5 4476030 4476065 -195154085 + AT_rich Low_complexity Low_complexity 1 35 0 251 267 124 0 chr5 4476173 4476278 -195153872 + MER45A DNA AcHobo 61 178 0 597 249 0 0 chr5 4476933 4477110 -195153040 + (TG)n Simple_repeat Simple_repeat 2 178 0 260 184 0 0 chr5 4477135 4477184 -195152966 + MER4-int LTR ERV1 1114 1162 -5436 23 54 0 0 chr5 4478503 4478540 -195151610 + AT_rich Low_complexity Low_complexity 1 37 0 497 128 26 0 chr5 4478568 4478646 -195151504 + MER116 DNA Mariner 1 80 0 1606 164 7 31 chr5 4478728 4479044 -195151106 - AluJo SINE Alu 0 312 4 650 90 0 0 chr5 4479420 4479509 -195150641 - L1PA8 LINE L1 0 6172 6084 201 298 21 32 chr5 4479576 4479670 -195150480 - MIR SINE MIR -99 163 71 1803 196 17 6 chr5 4479945 4480298 -195149852 - MLT1A1 LTR MaLR -8 357 1 3078 118 18 11 chr5 4480758 4481199 -195148951 + MLT2A1 LTR ERVL 1 444 0 43342 84 7 9 chr5 4481199 4486866 -195143284 + HERVL-A1-A1 LTR ERVL 1 5654 0 3211 100 20 11 chr5 4486866 4487306 -195142844 + MLT2A1 LTR ERVL 1 444 0 269 82 20 0 chr5 4487348 4487397 -195142753 + (TTTTG)n Simple_repeat Simple_repeat 2 51 0 318 190 20 30 chr5 4488357 4488457 -195141693 + T-rich Low_complexity Low_complexity 6 104 0 360 0 0 0 chr5 4489400 4489440 -195140710 + (CA)n Simple_repeat Simple_repeat 2 41 0 2335 97 0 0 chr5 4489440 4489738 -195140412 - AluSp SINE Alu -12 301 4 1897 135 7 0 chr5 4490241 4490522 -195139628 + AluSx SINE Alu 23 305 -7 189 0 0 0 chr5 4490573 4490594 -195139556 + (T)n Simple_repeat Simple_repeat 1 21 0 534 296 87 27 chr5 4490896 4491230 -195138920 + MLT1H LTR MaLR 1 354 -195 22 0 0 0 chr5 4491413 4491435 -195138715 + AT_rich Low_complexity Low_complexity 1 22 0 2248 110 0 10 chr5 4491556 4491865 -195138285 - AluSx SINE Alu -6 306 1 191 408 14 7 chr5 4492255 4492402 -195137748 - MIR3 SINE MIR -41 167 20 339 25 0 0 chr5 4492521 4492561 -195137589 + (CA)n Simple_repeat Simple_repeat 2 41 0 1681 189 85 33 chr5 4492562 4493086 -195137064 + MLT2A2 LTR ERVL 2 549 -5 459 0 0 0 chr5 4493086 4493137 -195137013 + (CA)n Simple_repeat Simple_repeat 2 52 0 186 143 0 0 chr5 4493137 4493172 -195136978 + (GA)n Simple_repeat Simple_repeat 1 35 0 298 196 22 0 chr5 4493326 4493418 -195136732 + (TA)n Simple_repeat Simple_repeat 2 95 0 24 0 0 0 chr5 4493465 4493489 -195136661 + AT_rich Low_complexity Low_complexity 1 24 0 2220 113 0 7 chr5 4493499 4493799 -195136351 + AluSx SINE Alu 1 298 -14 9442 193 38 13 chr5 4493814 4499151 -195130999 + L1MC1 LINE L1 23 5659 -954 1494 116 5 14 chr5 4499151 4499367 -195130783 + AluSq SINE Alu 94 307 -6 9442 193 38 13 chr5 4499367 4500341 -195129809 + L1MC1 LINE L1 5659 6607 -6 6029 111 25 20 chr5 4505853 4506841 -195123309 + L1PA13 LINE L1 5168 6161 -2 1789 182 116 6 chr5 4507865 4508228 -195121922 - MER57A LTR ERV1 0 403 1 863 203 7 7 chr5 4509214 4509367 -195120783 + AluJb SINE Alu 137 289 -23 7307 161 74 5 chr5 4513129 4515597 -195114553 - L1MA3 LINE L1 0 6305 3657 180 0 0 0 chr5 4515997 4516017 -195114133 + (T)n Simple_repeat Simple_repeat 1 20 0 237 167 0 0 chr5 4517572 4517626 -195112524 + CT-rich Low_complexity Low_complexity 2 55 0 225 211 0 0 chr5 4517869 4517921 -195112229 + (TATATG)n Simple_repeat Simple_repeat 2 53 0 318 106 0 0 chr5 4517933 4517980 -195112170 + (CA)n Simple_repeat Simple_repeat 1 47 0 22 0 0 0 chr5 4518513 4518535 -195111615 + AT_rich Low_complexity Low_complexity 1 22 0 406 260 16 16 chr5 4519486 4519609 -195110541 + L2 LINE L2 3187 3309 -4 305 342 69 32 chr5 4520140 4520536 -195109614 + L3 LINE CR1 363 832 -745 325 378 67 11 chr5 4520830 4521097 -195109053 + L3 LINE CR1 1250 1531 -46 972 217 53 35 chr5 4521099 4521417 -195108733 + MER33 DNA MER1_type 1 324 0 302 306 20 0 chr5 4521434 4521532 -195108618 + MER5A DNA MER1_type 10 109 -80 462 110 82 0 chr5 4521908 4521981 -195108169 + MADE1 DNA Mariner 1 79 -1 306 115 0 0 chr5 4522475 4522527 -195107623 + (TG)n Simple_repeat Simple_repeat 1 52 0 1375 236 120 23 chr5 4523086 4523485 -195106665 - MER31B LTR ERV1 -28 438 1 2494 31 7 0 chr5 4523876 4524170 -195105980 - L1PA4 LINE L1 0 6155 5860 1204 179 25 122 chr5 4524427 4524780 -195105370 + MLT1A1 LTR MaLR 1 319 -46 372 291 50 50 chr5 4526922 4527142 -195103008 + MIR SINE MIR 13 232 -30 745 281 86 69 chr5 4530471 4531329 -195098821 + L1MEd LINE L1 427 1334 -4871 922 202 33 29 chr5 4532374 4532690 -195097460 + MSTD LTR MaLR 4 396 0 1323 0 0 0 chr5 4533555 4533699 -195096451 - L1PA2 LINE L1 -3 6152 6009 12879 28 1 0 chr5 4533700 4535217 -195094933 + L1P LINE L1 2926 4444 -1702 2220 200 22 16 chr5 4536322 4536811 -195093339 - L1MC3 LINE L1 -1 7784 7293 2315 244 47 31 chr5 4536834 4537360 -195092790 - L1MCa LINE L1 -4573 1991 1475 342 0 0 0 chr5 4537360 4537398 -195092752 + (TG)n Simple_repeat Simple_repeat 2 39 0 2315 244 47 31 chr5 4537398 4538091 -195092059 - L1MCa LINE L1 -5089 1475 37 22 35 0 0 chr5 4538226 4538255 -195091895 + AT_rich Low_complexity Low_complexity 1 29 0 318 275 43 72 chr5 4538606 4538744 -195091406 + MLT1H LTR MaLR 209 342 -207 423 243 0 10 chr5 4538959 4539062 -195091088 + FLAM_A SINE Alu 32 133 -9 1627 65 0 0 chr5 4539655 4539855 -195090295 + L1PA8 LINE L1 5967 6166 -6 262 336 30 8 chr5 4540658 4540792 -195089358 - MIR SINE MIR -86 176 40 1908 161 146 3 chr5 4541465 4541843 -195088307 - MSTB1 LTR MaLR 0 432 1 1792 35 4 18 chr5 4542344 4542571 -195087579 - L1PA4 LINE L1 0 6155 5932 1505 232 30 14 chr5 4542775 4543142 -195087008 + MLT1A2 LTR MaLR 2 374 0 182 380 43 0 chr5 4543720 4543812 -195086338 + L3 LINE CR1 894 989 -588 1387 224 48 3 chr5 4544455 4544790 -195085360 - MER89 LTR ERV1 -22 537 188 2423 53 0 3 chr5 4546981 4547331 -195082819 + AluY SINE Alu 1 349 0 22 56 0 0 chr5 4547378 4547414 -195082736 + AT_rich Low_complexity Low_complexity 1 36 0 1972 189 21 0 chr5 4549847 4550229 -195079921 + MLT1B LTR MaLR 1 390 0 189 303 0 0 chr5 4551464 4551609 -195078541 + (CA)n Simple_repeat Simple_repeat 1 145 0 2474 94 46 6 chr5 4552457 4552807 -195077343 - THE1B LTR MaLR 0 364 1 264 184 0 0 chr5 4554151 4554200 -195075950 + Charlie1 DNA MER1_type 2713 2761 0 306 257 49 28 chr5 4554275 4554419 -195075731 + GA-rich Low_complexity Low_complexity 2 148 0 211 257 40 0 chr5 4555096 4555170 -195074980 + GA-rich Low_complexity Low_complexity 5 81 0 1335 173 82 12 chr5 4555212 4555467 -195074683 + AluJo SINE Alu 16 288 -24 213 39 0 0 chr5 4555476 4555502 -195074648 + (TAA)n Simple_repeat Simple_repeat 2 27 0 1525 206 41 32 chr5 4555590 4556032 -195074118 - Charlie1b DNA MER1_type -4 519 74 1154 262 29 29 chr5 4556253 4556593 -195073557 + MLT1A1 LTR MaLR 26 365 0 373 254 18 26 chr5 4557831 4557945 -195072205 + Charlie1b DNA MER1_type 88 200 -323 728 197 8 0 chr5 4559767 4559899 -195070251 - FLAM_C SINE Alu 0 133 1 2743 250 40 22 chr5 4560201 4561022 -195069128 - L1ME1 LINE L1 -6 6160 5325 4549 161 46 23 chr5 4561033 4561874 -195068276 - L1MC1 LINE L1 -23 6310 5450 246 242 62 62 chr5 4563215 4563343 -195066807 + MER39 LTR ERV1 6 133 -574 910 253 77 33 chr5 4563364 4563700 -195066450 + MER39 LTR ERV1 357 707 0 4169 164 18 78 chr5 4564982 4565941 -195064209 - L1MB3 LINE L1 -3 6180 5280 728 226 43 43 chr5 4567866 4568074 -195062076 + MER3 DNA MER1_type 1 208 -1 1242 271 32 42 chr5 4568128 4568626 -195061524 + MLT1D LTR MaLR 1 493 -12 2167 131 0 0 chr5 4568627 4568932 -195061218 + AluSx SINE Alu 1 305 -7 1477 165 32 21 chr5 4568953 4569232 -195060918 + AluJb SINE Alu 1 282 -30 25 51 0 0 chr5 4569234 4569273 -195060877 + AT_rich Low_complexity Low_complexity 1 39 0 279 326 54 0 chr5 4570111 4570203 -195059947 - L2 LINE L2 -3 3310 3214 290 247 112 8 chr5 4570263 4570385 -195059765 + MLT1H LTR MaLR 82 173 -376 347 202 0 0 chr5 4570537 4570608 -195059542 + MLT1G1 LTR MaLR 477 593 -2 239 143 0 0 chr5 4570876 4570918 -195059232 + L2 LINE L2 3271 3312 -1 275 216 122 101 chr5 4571276 4571415 -195058735 + MIR3 SINE MIR 5 146 -62 1416 210 63 30 chr5 4573168 4573530 -195056620 + MLT1A2 LTR MaLR 1 374 0 397 300 95 21 chr5 4574324 4574514 -195055636 + MIR SINE MIR 23 226 -36 1521 219 135 12 chr5 4574623 4575039 -195055111 + MLT1C LTR MaLR 1 467 0 330 167 0 0 chr5 4575327 4575387 -195054763 + (TA)n Simple_repeat Simple_repeat 1 60 0 2746 114 30 2 chr5 4575391 4575784 -195054366 - MLT2A1 LTR ERVL -40 404 1 301 229 0 128 chr5 4575784 4575893 -195054257 + L1MC3 LINE L1 6627 6721 -1064 814 206 0 14 chr5 4575894 4576035 -195054115 - FLAM_C SINE Alu -2 141 3 3447 240 60 24 chr5 4576036 4577061 -195053089 + L1MC3 LINE L1 6715 7775 -10 1710 285 98 60 chr5 4577072 4579838 -195050312 + L1MEc LINE L1 1069 3912 -2303 1831 303 60 11 chr5 4580495 4581481 -195048669 + L1MEc LINE L1 3881 4914 -1301 4822 188 11 26 chr5 4582157 4583631 -195046519 - L1MA6 LINE L1 0 6300 4850 1002 162 11 0 chr5 4583623 4583808 -195046342 + L1 LINE L1 3961 4147 -1999 * 180 97 0 0 chr5 4584437 4584468 -195045682 + (CAAAAA)n Simple_repeat Simple_repeat 1 31 0 23 33 0 0 chr5 4586567 4586597 -195043553 + AT_rich Low_complexity Low_complexity 1 30 0 2188 99 17 0 chr5 4587261 4587553 -195042597 - AluSc SINE Alu -12 297 1 336 24 0 0 chr5 4588305 4588346 -195041804 + (CA)n Simple_repeat Simple_repeat 2 42 0 244 197 45 45 chr5 4589067 4589133 -195041017 + MIR SINE MIR 87 152 -110 1661 237 2 14 chr5 4589784 4590222 -195039928 - L1 LINE L1 -1034 5112 4680 25 0 0 0 chr5 4590250 4590275 -195039875 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr5 4590296 4590319 -195039831 + AT_rich Low_complexity Low_complexity 1 23 0 2334 98 22 182 chr5 4590494 4591033 -195039117 + MLT2A2 LTR ERVL 1 453 0 2177 108 17 0 chr5 4593160 4593456 -195036694 - AluSq SINE Alu -12 301 1 2048 106 4 7 chr5 4593500 4593774 -195036376 - AluSg SINE Alu -18 292 20 1758 166 3 7 chr5 4596309 4596620 -195033530 - AluSx SINE Alu 0 310 1 23 0 0 0 chr5 4599826 4599849 -195030301 + AT_rich Low_complexity Low_complexity 1 23 0 2071 141 0 3 chr5 4602767 4603066 -195027084 + AluSx SINE Alu 1 298 -14 219 339 147 16 chr5 4604116 4604429 -195025721 - L2 LINE L2 -2131 1183 830 339 298 32 8 chr5 4605831 4605955 -195024195 - MIR SINE MIR -19 243 117 240 261 39 78 chr5 4606683 4606836 -195023314 - L2 LINE L2 -528 2786 2640 362 337 0 23 chr5 4607017 4607369 -195022781 + (CA)n Simple_repeat Simple_repeat 1 343 0 311 312 13 26 chr5 4607381 4607535 -195022615 + (CA)n Simple_repeat Simple_repeat 1 152 0 298 346 12 12 chr5 4607578 4607740 -195022410 + (CA)n Simple_repeat Simple_repeat 1 162 0 228 319 42 56 chr5 4610116 4610260 -195019890 + L2 LINE L2 3163 3304 -9 1584 215 24 6 chr5 4611044 4611383 -195018767 + MLT2C1 LTR ERVL 5 349 -48 246 194 0 65 chr5 4611434 4611496 -195018654 + MLT2C1 LTR ERVL 463 520 0 317 345 0 35 chr5 4611767 4611912 -195018238 + L2 LINE L2 3165 3304 -9 389 211 21 18 chr5 4612871 4613212 -195016938 + (TAGA)n Simple_repeat Simple_repeat 1 342 0 901 126 11 0 chr5 4613256 4613431 -195016719 + (TAGA)n Simple_repeat Simple_repeat 2 178 0 584 70 12 0 chr5 4613461 4613547 -195016603 + (TAGA)n Simple_repeat Simple_repeat 1 87 0 1889 118 3 56 chr5 4614724 4615028 -195015122 - AluSx SINE Alu -20 292 5 411 153 0 48 chr5 4619107 4619296 -195010854 + (TA)n Simple_repeat Simple_repeat 1 180 0 286 105 0 0 chr5 4619296 4619334 -195010816 + (CA)n Simple_repeat Simple_repeat 1 38 0 2049 128 28 0 chr5 4620310 4620600 -195009550 + AluSq SINE Alu 1 298 -15 2685 113 8 8 chr5 4620898 4621262 -195008888 + THE1B LTR MaLR 1 364 0 180 275 203 48 chr5 4624662 4624869 -195005281 - L2 LINE L2 -20 3252 3014 1655 207 114 34 chr5 4625041 4625481 -195004669 - L1MB2 LINE L1 -2 6169 5695 696 239 0 0 chr5 4625519 4625649 -195004501 + FLAM_A SINE Alu 1 130 -3 287 327 138 11 chr5 4626136 4626396 -195003754 - MLT1J1 LTR MaLR -1 445 153 3800 180 46 18 chr5 4629720 4630502 -194999648 - Tigger3(Golem) DNA MER2_type 0 3029 2226 328 235 25 12 chr5 4630500 4630581 -194999569 - Tigger3(Golem) DNA MER2_type -2947 82 1 * 22 35 0 0 chr5 4631865 4631894 -194998256 + AT_rich Low_complexity Low_complexity 1 29 0 30 59 0 0 chr5 4633117 4633168 -194996982 + AT_rich Low_complexity Low_complexity 1 51 0 353 246 75 23 chr5 4633323 4633483 -194996667 - MLT1H LTR MaLR -2 593 421 21 36 0 0 chr5 4634750 4634778 -194995372 + AT_rich Low_complexity Low_complexity 1 28 0 281 282 69 46 chr5 4635067 4635241 -194994909 + L1M4 LINE L1 2444 2621 -3525 1658 159 24 24 chr5 4635310 4635629 -194994521 + AluJb SINE Alu 1 312 0 2213 126 129 26 chr5 4635906 4636294 -194993856 + MSTA LTR MaLR 1 428 0 418 171 0 27 chr5 4636729 4636840 -194993310 + (TCTA)n Simple_repeat Simple_repeat 2 109 0 2380 115 142 0 chr5 4637631 4638004 -194992146 + MSTA LTR MaLR 1 426 -2 260 242 11 77 chr5 4638058 4638149 -194992001 - MIR SINE MIR 0 262 178 302 345 92 6 chr5 4638460 4638634 -194991516 + MER5A DNA MER1_type 1 189 0 1545 113 54 14 chr5 4639253 4639474 -194990676 - MER30 DNA MER1_type 0 230 1 1037 193 11 0 chr5 4639846 4640033 -194990117 - Tigger3(Golem) DNA MER2_type -41 2988 2800 374 172 0 0 chr5 4640022 4640086 -194990064 - Tigger3(Golem) DNA MER2_type -2924 105 42 * 1045 240 183 48 chr5 4642935 4643373 -194986777 + MLT1D LTR MaLR 8 504 -1 1640 181 6 49 chr5 4645320 4645670 -194984480 + AluJb SINE Alu 1 312 0 229 346 15 31 chr5 4646098 4646228 -194983922 - L2 LINE L2 -5 3308 3181 264 345 29 12 chr5 4649926 4650097 -194980053 + ERVL LTR ERVL 461 634 -5130 340 361 43 29 chr5 4650287 4650567 -194979583 - LTR67 LTR ERVL -256 301 18 5833 72 1 0 chr5 4651929 4652652 -194977498 + HERVL LTR ERVL 3294 4017 -1637 27 0 0 0 chr5 4652663 4652690 -194977460 + AT_rich Low_complexity Low_complexity 1 27 0 205 128 43 0 chr5 4652795 4652842 -194977308 + CT-rich Low_complexity Low_complexity 2 50 0 23 0 0 0 chr5 4654365 4654388 -194975762 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr5 4655596 4655618 -194974532 + AT_rich Low_complexity Low_complexity 1 22 0 2720 200 43 23 chr5 4656313 4656919 -194973231 + L1MB8 LINE L1 5556 6173 -5 1934 167 6 13 chr5 4659450 4659848 -194970302 + AluSx SINE Alu 1 396 0 860 273 28 0 chr5 4659979 4660195 -194969955 - MER58A DNA MER1_type 0 224 3 206 327 0 0 chr5 4661703 4661755 -194968395 + L2 LINE L2 3195 3246 -67 23 0 0 0 chr5 4661896 4661919 -194968231 + AT_rich Low_complexity Low_complexity 1 23 0 21 57 0 0 chr5 4661997 4662032 -194968118 + AT_rich Low_complexity Low_complexity 1 35 0 6131 107 53 6 chr5 4662347 4663247 -194966903 - L1PA10 LINE L1 -7 6161 5226 829 139 21 3 chr5 4663247 4663398 -194966752 + L1P LINE L1 3602 3750 -2396 356 266 186 0 chr5 4663746 4663870 -194966280 - LTR16C LTR ERVL -248 243 97 1957 142 44 0 chr5 4664028 4664323 -194965827 - AluY SINE Alu -3 308 1 23 0 0 0 chr5 4664582 4664605 -194965545 + AT_rich Low_complexity Low_complexity 1 23 0 257 296 57 0 chr5 4664642 4664801 -194965349 + L1MCc LINE L1 1369 1536 -4887 206 301 0 0 chr5 4664866 4664939 -194965211 - L2 LINE L2 0 3272 3200 210 191 0 0 chr5 4669588 4669630 -194960520 + T-rich Low_complexity Low_complexity 1 42 0 235 231 19 0 chr5 4670844 4670896 -194959254 + GA-rich Low_complexity Low_complexity 4 56 0 2128 82 11 4 chr5 4671071 4671373 -194958777 + AluY SINE Alu 1 304 0 21398 163 21 18 chr5 4672662 4675352 -194954798 + L1M1 LINE L1 12 2693 -4872 2472 170 26 5 chr5 4675352 4675769 -194954381 + MSTA LTR MaLR 1 426 -2 21398 163 21 18 chr5 4675769 4677067 -194953083 + L1M1 LINE L1 2693 4018 -3547 1286 142 5 5 chr5 4677067 4677285 -194952865 + L1MA2 LINE L1 6087 6304 0 21398 163 21 18 chr5 4677285 4677302 -194952848 + L1M1 LINE L1 4018 4033 -3532 2500 181 49 19 chr5 4677324 4677811 -194952339 + LTR26B LTR ERV1 30 531 0 2244 135 0 0 chr5 4679475 4679787 -194950363 + AluSx SINE Alu 1 312 0 5504 144 19 32 chr5 4680364 4681299 -194948851 + MER49 LTR ERV1 1 923 0 255 224 15 15 chr5 4681612 4681679 -194948471 + GA-rich Low_complexity Low_complexity 2 68 0 5515 162 12 17 chr5 4682378 4682736 -194947414 - L1PB1 LINE L1 0 6151 5793 311 18 71 0 chr5 4682736 4682792 -194947358 + (TA)n Simple_repeat Simple_repeat 2 61 0 5515 162 12 17 chr5 4682792 4684170 -194945980 - L1PB1 LINE L1 -358 5793 4427 * 5761 217 13 4 chr5 4684169 4685456 -194944694 + L1PB1 LINE L1 4516 5814 -1751 820 153 0 16 chr5 4686339 4686463 -194943687 - FLAM_C SINE Alu -11 122 1 24 0 0 0 chr5 4687039 4687063 -194943087 + AT_rich Low_complexity Low_complexity 1 24 0 24 32 0 0 chr5 4687484 4687515 -194942635 + AT_rich Low_complexity Low_complexity 1 31 0 191 250 0 16 chr5 4687530 4687594 -194942556 + CT-rich Low_complexity Low_complexity 3 65 0 297 0 0 0 chr5 4688483 4688516 -194941634 + (TG)n Simple_repeat Simple_repeat 1 33 0 244 190 17 0 chr5 4688695 4688753 -194941397 + MER113 DNA MER1_type? 159 217 -304 1304 201 41 106 chr5 4689330 4689747 -194940403 + MLT1B LTR MaLR 1 390 0 342 290 38 30 chr5 4689790 4689921 -194940229 + L2 LINE L2 3182 3313 0 2152 196 27 7 chr5 4690772 4691186 -194938964 + MSTB LTR MaLR 1 422 -4 184 315 0 19 chr5 4694542 4694596 -194935554 + L2 LINE L2 3210 3262 -10 863 213 80 36 chr5 4697542 4697919 -194932231 - MLT1E1 LTR MaLR -2 591 174 1216 241 40 54 chr5 4697919 4698289 -194931861 - MLT1A1 LTR MaLR 0 365 1 863 213 80 36 chr5 4698289 4698360 -194931790 - MLT1E1 LTR MaLR -419 174 108 345 271 37 28 chr5 4698329 4698436 -194931714 - MLT1E LTR MaLR -427 166 59 * 426 313 56 0 chr5 4698720 4698918 -194931232 + LTR16C LTR ERVL 283 491 0 1502 183 54 0 chr5 4698978 4699220 -194930930 - MLT1C LTR MaLR -12 455 195 192 40 0 0 chr5 4699220 4699245 -194930905 + (TG)n Simple_repeat Simple_repeat 2 26 0 1502 183 54 0 chr5 4699245 4699281 -194930869 - MLT1C LTR MaLR -272 195 162 1137 167 15 0 chr5 4699349 4699553 -194930597 + L1MA4 LINE L1 6060 6266 -34 7650 246 61 45 chr5 4699555 4700307 -194929843 - L1 LINE L1 -1849 4501 3763 2031 125 3 0 chr5 4700307 4700603 -194929547 - AluY SINE Alu -4 307 11 7650 246 61 45 chr5 4700603 4702268 -194927882 - L1 LINE L1 -2587 3763 2127 2027 121 24 3 chr5 4702268 4702557 -194927593 - AluSx SINE Alu -17 295 1 7650 246 61 45 chr5 4702557 4703767 -194926383 - L1 LINE L1 -4223 2127 1053 1480 168 44 0 chr5 4703767 4704017 -194926133 + AluJb SINE Alu 43 303 -9 7650 246 61 45 chr5 4704017 4705084 -194925066 - L1 LINE L1 -5297 1053 5 211 209 45 0 chr5 4705193 4705260 -194924890 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 272 298 24 0 chr5 4705262 4705346 -194924804 + L1MEc LINE L1 118 203 -6193 331 359 18 12 chr5 4705385 4705552 -194924598 + L1MEc LINE L1 261 428 -5968 1090 278 35 12 chr5 4705718 4706056 -194924094 - L1MC/D LINE L1 -2208 5600 5255 284 309 36 47 chr5 4706170 4706448 -194923702 - L1MC/D LINE L1 -1115 5031 4757 2105 188 9 0 chr5 4706463 4706808 -194923342 - MER7A DNA MER2_type 0 346 1 507 311 117 30 chr5 4706974 4707575 -194922575 + L2 LINE L2 2662 3312 -1 489 296 5 7 chr5 4708046 4708509 -194921641 + (CA)n Simple_repeat Simple_repeat 1 461 0 254 292 6 0 chr5 4708567 4708728 -194921422 + (CA)n Simple_repeat Simple_repeat 1 162 0 186 189 0 0 chr5 4709256 4709293 -194920857 + (CAATA)n Simple_repeat Simple_repeat 2 38 0 1840 121 10 34 chr5 4711976 4712274 -194917876 - AluSx SINE Alu -21 291 1 238 330 154 0 chr5 4713387 4713478 -194916672 - MIR SINE MIR -88 120 16 461 351 20 15 chr5 4714122 4714324 -194915826 + MIR SINE MIR 48 250 -12 747 188 0 0 chr5 4714934 4715110 -194915040 + (TG)n Simple_repeat Simple_repeat 2 177 0 290 340 10 0 chr5 4715772 4715875 -194914275 + MIR SINE MIR 146 249 -13 200 33 0 33 chr5 4717194 4717224 -194912926 + (TTTC)n Simple_repeat Simple_repeat 4 32 0 1474 181 63 20 chr5 4717229 4717257 -194912893 - AluJb SINE Alu 0 312 287 1068 44 22 39 chr5 4717257 4717439 -194912711 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 1474 181 63 20 chr5 4717439 4717709 -194912441 - AluJb SINE Alu -25 287 1 2659 52 9 0 chr5 4718267 4718597 -194911553 + L1PA7 LINE L1 5817 6149 -5 4492 104 14 1 chr5 4718639 4719295 -194910855 + L1PB2 LINE L1 5486 6149 -2 424 270 15 7 chr5 4720461 4720598 -194909552 + (CA)n Simple_repeat Simple_repeat 2 139 0 406 294 106 42 chr5 4721160 4721425 -194908725 + L3b LINE CR1 1184 1465 -118 391 227 23 0 chr5 4721598 4721686 -194908464 - L1ME1 LINE L1 -20 6146 6057 352 173 111 0 chr5 4722927 4723008 -194907142 - L1MC4 LINE L1 -1339 6703 6614 309 262 71 0 chr5 4723024 4723108 -194907042 - L1MC4 LINE L1 -1339 6703 6614 300 267 47 0 chr5 4723044 4723130 -194907020 + L1MC4 LINE L1 6614 6703 -1339 * 613 166 6 30 chr5 4723250 4723419 -194906731 + CT-rich Low_complexity Low_complexity 1 165 0 25 0 0 0 chr5 4724390 4724415 -194905735 + AT_rich Low_complexity Low_complexity 1 25 0 2124 110 4 0 chr5 4724679 4725003 -194905147 - AluSx SINE Alu 0 325 1 491 191 48 40 chr5 4726101 4726227 -194903923 + MER5A DNA MER1_type 3 129 -60 1699 194 39 31 chr5 4726290 4726677 -194903473 + MLT1B LTR MaLR 1 390 0 2304 106 6 3 chr5 4726764 4727075 -194903075 + AluSx SINE Alu 1 312 0 198 323 85 15 chr5 4727468 4727598 -194902552 - MIR SINE MIR -44 218 80 23 0 0 0 chr5 4727981 4728004 -194902146 + AT_rich Low_complexity Low_complexity 1 23 0 439 253 88 24 chr5 4729647 4729817 -194900333 - L3b LINE CR1 -123 1460 1280 530 100 17 133 chr5 4729840 4729960 -194900190 - AluSg/x SINE Alu -17 292 187 1820 103 0 9 chr5 4729960 4730193 -194899957 - AluSc SINE Alu -78 231 1 338 264 75 57 chr5 4732009 4732168 -194897982 - LTR16A1 LTR ERVL -30 427 266 991 224 69 114 chr5 4732524 4732992 -194897158 - MLT1D LTR MaLR -16 434 4 2104 120 0 3 chr5 4734211 4734545 -194895605 + AluSx SINE Alu 1 333 0 258 186 147 85 chr5 4735258 4735387 -194894763 - MLT1H LTR MaLR -28 521 385 896 219 47 9 chr5 4736023 4736256 -194893894 + MLT1C LTR MaLR 1 242 -225 217 286 37 62 chr5 4736460 4736548 -194893602 + MIR SINE MIR 70 154 -108 1584 229 87 18 chr5 4736548 4736985 -194893165 - MLT1C LTR MaLR 0 467 1 217 286 37 62 chr5 4736985 4737057 -194893093 + MIR SINE MIR 154 226 -36 1916 155 0 10 chr5 4739350 4739659 -194890491 - AluSx SINE Alu -4 308 3 798 187 48 17 chr5 4739717 4739987 -194890163 - MLT1B LTR MaLR 0 390 6 21 0 0 0 chr5 4740024 4740045 -194890105 + AT_rich Low_complexity Low_complexity 1 21 0 802 186 19 86 chr5 4740117 4740152 -194889998 + MER58A DNA MER1_type 29 65 -2355 2305 41 0 11 chr5 4740152 4740420 -194889730 - AluY SINE Alu -5 306 42 802 186 19 86 chr5 4740420 4740594 -194889556 + MER58A DNA MER1_type 65 224 0 896 196 121 46 chr5 4740599 4740880 -194889270 + MER33 DNA MER1_type 1 302 -22 1131 111 0 0 chr5 4741495 4741648 -194888502 + AluSq SINE Alu 153 305 -8 200 173 19 19 chr5 4741662 4741714 -194888436 + T-rich Low_complexity Low_complexity 2 53 0 231 353 7 0 chr5 4742458 4742594 -194887556 + (CA)n Simple_repeat Simple_repeat 1 137 0 1381 178 67 38 chr5 4742845 4743050 -194887100 - MER47A DNA MER2_type -1969 354 134 642 222 0 0 chr5 4743050 4743167 -194886983 + FLAM_C SINE Alu 1 117 -16 1381 178 67 38 chr5 4743167 4743304 -194886846 - MER47A DNA MER2_type -2189 134 2 300 316 89 41 chr5 4744460 4744922 -194885228 + L1MC/D LINE L1 5254 5737 -2071 357 291 96 25 chr5 4746361 4746560 -194883590 + MIR SINE MIR 32 244 -18 1552 209 3 0 chr5 4747442 4747900 -194882250 - AluJo SINE Alu 0 465 7 5730 123 22 2 chr5 4747917 4748792 -194881358 + L1PA13 LINE L1 5279 6160 -3 240 60 80 0 chr5 4749425 4749475 -194880675 + (CAAA)n Simple_repeat Simple_repeat 2 55 0 2106 94 7 0 chr5 4749476 4749752 -194880398 - AluSp SINE Alu -35 278 1 810 193 92 18 chr5 4750868 4751086 -194879064 + MER96B DNA MER1_type? 3 236 -181 247 179 30 15 chr5 4751255 4751322 -194878828 + (CATATA)n Simple_repeat Simple_repeat 2 69 0 2726 211 58 53 chr5 4752936 4753816 -194876334 + L1ME2 LINE L1 5280 6163 -1 327 346 0 7 chr5 4754420 4754556 -194875594 - L2 LINE L2 0 3272 3138 2022 116 16 7 chr5 4755106 4755409 -194874741 - AluSc SINE Alu -1 308 3 1741 168 0 29 chr5 4757515 4757831 -194872319 - AluJb SINE Alu -5 307 1 398 304 7 15 chr5 4758625 4758760 -194871390 - MIR SINE MIR -55 153 20 184 276 161 0 chr5 4760361 4760448 -194869702 - MIR SINE MIR -131 131 31 276 204 0 0 chr5 4762137 4762191 -194867959 - L1PA11 LINE L1 -1028 5118 5065 5800 130 16 4 chr5 4762191 4763226 -194866924 + L1PA11 LINE L1 5129 6174 0 231 387 15 0 chr5 4763498 4763635 -194866515 + MIR SINE MIR 17 155 -107 501 198 0 0 chr5 4764316 4764417 -194865733 - AluJb SINE Alu 0 312 212 2197 118 0 3 chr5 4766068 4766364 -194863786 - AluSx SINE Alu -17 295 1 2228 174 46 16 chr5 4766512 4767013 -194863137 - L1MA9 LINE L1 -6 6306 5791 458 265 53 0 chr5 4766868 4767038 -194863112 - L1PA15 LINE L1 -227 5938 5760 459 246 49 0 chr5 4767164 4767286 -194862864 - MIR SINE MIR -71 191 64 353 125 0 0 chr5 4767327 4767383 -194862767 - U2 snRNA snRNA -128 60 5 5002 146 3 8 chr5 4767383 4768264 -194861886 + L1PA10 LINE L1 4088 4964 -1182 1934 133 47 9 chr5 4768267 4768606 -194861544 - THE1C LTR MaLR -23 352 1 6342 92 8 1 chr5 4768614 4769790 -194860360 + L1PA10 LINE L1 4966 6157 -11 2591 42 0 6 chr5 4771569 4771882 -194858268 + AluY SINE Alu 1 311 0 24 0 0 0 chr5 4774107 4774131 -194856019 + AT_rich Low_complexity Low_complexity 1 24 0 5080 19 3 0 chr5 4776317 4776906 -194853244 + L1PA3 LINE L1 5565 6155 0 34 24 0 0 chr5 4776910 4776951 -194853199 + AT_rich Low_complexity Low_complexity 1 41 0 2449 183 41 33 chr5 4777859 4778363 -194851787 + MLT2B3 LTR ERVL 2 512 -42 435 100 0 0 chr5 4778363 4778433 -194851717 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 2449 183 41 33 chr5 4778433 4778469 -194851681 + MLT2B3 LTR ERVL 512 546 -8 262 236 0 22 chr5 4778470 4778559 -194851591 + (CATATA)n Simple_repeat Simple_repeat 6 92 0 753 209 0 37 chr5 4778586 4778749 -194851401 - MER2 DNA MER2_type -183 162 6 279 272 172 28 chr5 4779732 4779912 -194850238 + MLT1H LTR MaLR 79 284 -265 2055 111 50 10 chr5 4780346 4780644 -194849506 - AluSg SINE Alu 0 310 1 27 62 0 0 chr5 4780949 4780997 -194849153 + AT_rich Low_complexity Low_complexity 1 48 0 877 238 49 8 chr5 4781144 4781388 -194848762 + LTR53 LTR ERVL 1 254 -265 406 177 62 9 chr5 4781392 4781505 -194848645 + MLT1A1 LTR MaLR 5 123 -242 1138 216 0 4 chr5 4781705 4781950 -194848200 + MLT1A1 LTR MaLR 122 365 0 1028 203 103 0 chr5 4781953 4782195 -194847955 + LTR53 LTR ERVL 253 519 0 2385 104 0 0 chr5 4783022 4783331 -194846819 - AluSx SINE Alu -3 309 1 309 89 0 0 chr5 4783395 4783411 -194846739 + (CA)n Simple_repeat Simple_repeat 1 61 0 309 89 0 0 chr5 4783411 4783456 -194846694 + (CA)n Simple_repeat Simple_repeat 2 46 0 1145 279 91 66 chr5 4783482 4784579 -194845571 - L1MCc LINE L1 -4403 2719 1651 396 0 0 0 chr5 4784579 4784623 -194845527 + (TAGA)n Simple_repeat Simple_repeat 1 44 0 1145 279 91 66 chr5 4784623 4785518 -194844632 - L1MCc LINE L1 -5471 1651 457 1147 289 63 20 chr5 4785807 4786364 -194843786 - L1MCc LINE L1 -5824 599 19 318 203 14 40 chr5 4786384 4786439 -194843711 + L2 LINE L2 3234 3288 -25 2437 76 0 25 chr5 4786439 4786754 -194843396 - AluY SINE Alu -4 307 1 318 203 14 40 chr5 4786754 4786772 -194843378 + L2 LINE L2 3288 3305 -8 214 200 0 0 chr5 4787487 4787527 -194842623 + T-rich Low_complexity Low_complexity 1 40 0 289 230 40 0 chr5 4789292 4789366 -194840784 + MER89 LTR ERV1 11 87 -472 * 1476 214 14 6 chr5 4789341 4789701 -194840449 + MER89 LTR ERV1 197 559 0 40 0 0 0 chr5 4791377 4791417 -194838733 + AT_rich Low_complexity Low_complexity 1 40 0 216 0 0 0 chr5 4792411 4792435 -194837715 + (CCCA)n Simple_repeat Simple_repeat 2 25 0 431 333 6 0 chr5 4793106 4793271 -194836879 - MER63B DNA MER1_type -270 166 1 2194 114 0 0 chr5 4793564 4793861 -194836289 - AluSx SINE Alu -15 297 1 21 0 0 0 chr5 4794402 4794423 -194835727 + AT_rich Low_complexity Low_complexity 1 21 0 452 84 0 14 chr5 4794480 4794551 -194835599 + (GGAA)n Simple_repeat Simple_repeat 3 72 0 232 235 23 68 chr5 4794553 4794685 -194835465 + L1 LINE L1 3797 3922 -2224 586 306 108 54 chr5 4794714 4795289 -194834861 + L1ME3 LINE L1 3949 4554 -1592 590 292 70 46 chr5 4796213 4797249 -194832901 + L1ME3 LINE L1 4800 5858 -304 1816 205 30 5 chr5 4797267 4797671 -194832479 + MLT2C2 LTR ERVL 3 416 -48 1328 185 110 31 chr5 4797954 4798273 -194831877 + MER2 DNA MER2_type 1 344 0 1063 144 0 12 chr5 4798280 4798471 -194831679 - AluSg/x SINE Alu 0 312 134 2048 140 0 0 chr5 4798471 4798763 -194831387 - AluSg SINE Alu -17 293 2 538 264 42 14 chr5 4799065 4799209 -194830941 - MER5B DNA MER1_type -12 166 19 45 34 0 0 chr5 4800137 4800196 -194829954 + AT_rich Low_complexity Low_complexity 1 59 0 404 242 30 0 chr5 4802602 4802701 -194827449 + MIR SINE MIR 110 211 -51 1114 305 32 29 chr5 4802717 4803159 -194826991 - L2 LINE L2 -1045 2269 1827 1983 154 0 3 chr5 4803401 4803700 -194826450 + AluSx SINE Alu 1 298 -14 2679 225 72 115 chr5 4804128 4805543 -194824607 - MLT1A1-int LTR MaLR -13 1358 5 1326 227 16 40 chr5 4805547 4805921 -194824229 - MLT1A1 LTR MaLR 0 365 1 2107 218 67 19 chr5 4805941 4806439 -194823711 - MLT1E1 LTR MaLR -11 643 109 1778 201 41 41 chr5 4806439 4806906 -194823244 + MLT1C LTR MaLR 1 467 0 2107 218 67 19 chr5 4806906 4807021 -194823129 - MLT1E1 LTR MaLR -545 109 1 2486 119 11 0 chr5 4807151 4807522 -194822628 + THE1C LTR MaLR 1 375 0 358 240 16 8 chr5 4807554 4807647 -194822503 + MIR3 SINE MIR 105 199 -9 21 57 0 0 chr5 4808120 4808155 -194821995 + AT_rich Low_complexity Low_complexity 1 35 0 240 176 0 0 chr5 4808187 4808255 -194821895 + (TA)n Simple_repeat Simple_repeat 1 68 0 386 176 0 35 chr5 4809505 4809590 -194820560 - MER3 DNA MER1_type -2 207 126 957 161 57 0 chr5 4809593 4809804 -194820346 + L1MB3 LINE L1 5669 5891 -292 810 198 21 66 chr5 4809869 4810157 -194819993 - L1MA4 LINE L1 -1 6299 6025 195 267 35 69 chr5 4810341 4810457 -194819693 - MIR SINE MIR -116 146 35 28 0 0 0 chr5 4811691 4811719 -194818431 + AT_rich Low_complexity Low_complexity 1 28 0 3348 207 7 7 chr5 4811850 4812603 -194817547 - L1 LINE L1 -1884 4262 3510 4627 176 47 7 chr5 4812610 4813812 -194816338 + L1PA16 LINE L1 4900 6159 -7 2170 117 48 31 chr5 4815086 4815444 -194814706 - THE1B LTR MaLR 0 364 1 320 357 24 18 chr5 4815454 4815622 -194814528 + MIR SINE MIR 66 234 -28 243 290 117 51 chr5 4816118 4816332 -194813818 - L2 LINE L2 -812 2502 2275 23 33 0 0 chr5 5016679 5016709 -194613441 + AT_rich Low_complexity Low_complexity 1 30 0 189 107 0 0 chr5 5017369 5017397 -194612753 + (T)n Simple_repeat Simple_repeat 1 28 0 222 116 0 0 chr5 5020370 5020413 -194609737 + (T)n Simple_repeat Simple_repeat 1 43 0 769 258 114 54 chr5 5024995 5025561 -194604589 - MLT1F1 LTR MaLR -2 593 14 449 243 20 0 chr5 5025893 5026045 -194604105 - L1 LINE L1 -2793 3353 3199 5701 186 30 0 chr5 5026050 5027171 -194602979 + L1 LINE L1 3729 4883 -1263 1904 152 7 0 chr5 5028815 5029111 -194601039 + AluSx SINE Alu 1 298 -14 298 234 138 48 chr5 5029290 5029435 -194600715 + MLT1J2 LTR MaLR 291 448 -2 267 40 40 20 chr5 5031248 5031298 -194598852 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 1260 120 0 6 chr5 5032035 5032258 -194597892 - AluSp SINE Alu 0 353 132 738 291 35 14 chr5 5032363 5032809 -194597341 + MLT1F1 LTR MaLR 14 558 -9 1500 197 112 0 chr5 5034744 5035049 -194595101 - MLT1A1 LTR MaLR -12 353 15 221 56 0 28 chr5 5036704 5036740 -194593410 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 3943 28 2 0 chr5 5036740 5037200 -194592950 - L1PA3 LINE L1 -24 6131 5671 3500 25 3 0 chr5 5037207 5037653 -194592497 + L1PA3 LINE L1 5225 5671 -484 299 298 6 17 chr5 5038226 5038404 -194591746 + (TA)n Simple_repeat Simple_repeat 2 177 0 246 246 15 15 chr5 5038531 5038596 -194591554 - L2 LINE L2 -97 3216 3152 869 211 6 0 chr5 5038601 5038772 -194591378 + MER2 DNA MER2_type 2 173 -172 564 284 79 41 chr5 5038924 5039241 -194590909 - L2 LINE L2 -167 3146 2818 214 296 49 12 chr5 5039241 5039322 -194590828 - L2 LINE L2 -629 2685 2602 242 261 35 61 chr5 5039647 5039762 -194590388 + MLT1J2 LTR MaLR 338 449 -1 2117 150 0 0 chr5 5040153 5040466 -194589684 - AluSq SINE Alu 0 313 1 1642 262 27 53 chr5 5041166 5041903 -194588247 - L1ME1 LINE L1 -8 6656 5939 369 123 18 0 chr5 5041906 5041963 -194588187 + MSTA LTR MaLR 1 58 -370 406 91 0 9 chr5 5041964 5042028 -194588122 - MLT2A1 LTR ERVL -2 442 388 307 196 0 0 chr5 5042044 5042100 -194588050 - L1MC4 LINE L1 -1339 6703 6648 2941 71 2 40 chr5 5042112 5042532 -194587618 - MLT2A1 LTR ERVL -40 404 1 2873 87 14 2 chr5 5042532 5042948 -194587202 - HERVL-A1-A1 LTR ERVL 0 5654 5234 33495 82 4 1 chr5 5043048 5047390 -194582760 - HERVL-A1-A1 LTR ERVL -1292 4362 5 3172 73 4 77 chr5 5047394 5047873 -194582277 - MLT2A1 LTR ERVL 0 444 1 2192 134 32 16 chr5 5047873 5048242 -194581908 + MSTA LTR MaLR 54 428 0 2379 259 97 24 chr5 5048242 5049395 -194580755 - L1ME1 LINE L1 -733 5943 4701 479 260 39 43 chr5 5049398 5049606 -194580544 - L1ME1 LINE L1 -4953 1693 1487 1499 281 102 31 chr5 5049615 5050203 -194579947 - L1ME1 LINE L1 -5639 903 274 1221 150 50 32 chr5 5050227 5050447 -194579703 - AluSg/x SINE Alu 0 312 89 481 281 121 0 chr5 5050460 5050659 -194579491 - L1ME1 LINE L1 -6306 236 14 30 59 0 0 chr5 5051215 5051266 -194578884 + AT_rich Low_complexity Low_complexity 1 51 0 247 243 14 27 chr5 5051590 5051664 -194578486 + CT-rich Low_complexity Low_complexity 2 74 0 222 338 13 13 chr5 5052885 5052962 -194577188 + L2 LINE L2 3172 3248 -24 1031 271 54 19 chr5 5053598 5054023 -194576127 - L1ME1 LINE L1 -7 6228 5789 4761 281 72 41 chr5 5054046 5054889 -194575261 - L1ME1 LINE L1 -743 5472 4656 2058 121 0 0 chr5 5054889 5055171 -194574979 - AluSq SINE Alu -11 302 21 4761 281 72 41 chr5 5055171 5058412 -194571738 - L1ME1 LINE L1 -1559 4656 1316 261 254 106 48 chr5 5058640 5059023 -194571127 - L1ME1 LINE L1 -5180 1060 670 1544 225 62 58 chr5 5059074 5059572 -194570578 - MLT1D LTR MaLR 0 505 6 355 385 95 22 chr5 5059577 5059935 -194570215 - L1ME1 LINE L1 -5785 611 228 456 136 0 0 chr5 5059987 5060053 -194570097 - AluS SINE Alu -244 66 1 198 0 0 0 chr5 5060485 5060507 -194569643 + (GA)n Simple_repeat Simple_repeat 1 22 0 340 248 0 9 chr5 5060520 5060629 -194569521 - L1ME LINE L1 -5079 991 884 1365 271 103 21 chr5 5060640 5061108 -194569042 + MLT2B1 LTR ERVL 1 506 -14 1465 306 72 8 chr5 5061170 5061924 -194568226 - L1ME LINE L1 -5242 828 27 1064 179 145 4 chr5 5062256 5062338 -194567812 - MLT1C LTR MaLR -173 294 225 240 35 0 0 chr5 5062338 5062367 -194567783 + (TC)n Simple_repeat Simple_repeat 2 30 0 * 348 24 0 0 chr5 5062366 5062407 -194567743 + (TG)n Simple_repeat Simple_repeat 2 42 0 1064 179 145 4 chr5 5062367 5062558 -194567592 - MLT1C LTR MaLR -242 225 28 23 68 0 0 chr5 5062787 5062831 -194567319 + AT_rich Low_complexity Low_complexity 1 44 0 414 248 0 44 chr5 5062831 5062968 -194567182 + L1 LINE L1 2809 2939 -3207 218 222 0 16 chr5 5063926 5063989 -194566161 + (TA)n Simple_repeat Simple_repeat 2 63 0 2353 73 0 0 chr5 5064532 5064833 -194565317 - AluY SINE Alu -10 301 1 193 229 0 42 chr5 5065257 5065305 -194564845 + L2 LINE L2 3218 3263 -9 5561 220 53 45 chr5 5065921 5067551 -194562599 - L1MC3 LINE L1 -229 8054 6412 271 227 93 27 chr5 5067553 5067628 -194562522 - L1MC3 LINE L1 -2182 6101 6022 656 184 32 130 chr5 5067648 5067931 -194562219 - L1MC3 LINE L1 -816 5828 5843 2210 109 0 0 chr5 5067931 5068224 -194561926 - AluSx SINE Alu -17 295 3 656 184 32 130 chr5 5068224 5068345 -194561805 - L1MC3 LINE L1 -800 5844 5713 524 140 11 0 chr5 5068395 5068488 -194561662 + CT-rich Low_complexity Low_complexity 1 94 0 9225 190 32 25 chr5 5068526 5069599 -194560551 + L1M1 LINE L1 9 1072 -6493 2090 164 5 19 chr5 5069599 5069966 -194560184 + THE1B LTR MaLR 3 364 0 9225 190 32 25 chr5 5069966 5071798 -194558352 + L1M1 LINE L1 1072 3617 -3948 1929 111 26 15 chr5 5071956 5072297 -194557853 + L1MA3 LINE L1 3273 3617 -3948 207 100 0 0 chr5 5072341 5072402 -194557748 + (CA)n Simple_repeat Simple_repeat 1 91 0 207 100 0 0 chr5 5072402 5072432 -194557718 + (CA)n Simple_repeat Simple_repeat 1 30 0 1053 227 141 29 chr5 5072468 5072851 -194557299 + L1MA3 LINE L1 3628 4053 -3512 7463 111 9 0 chr5 5072851 5073946 -194556204 + THE1B-int LTR MaLR 476 1580 0 505 66 197 0 chr5 5073946 5074022 -194556128 + THE1B LTR MaLR 1 91 -273 235 211 0 35 chr5 5074043 5074100 -194556050 + THE1B-int LTR MaLR 1 55 -1596 2097 125 48 28 chr5 5074112 5074504 -194555646 + MSTA LTR MaLR 29 428 0 5590 166 15 22 chr5 5074504 5075929 -194554221 + L1MA3 LINE L1 5829 7240 -484 2354 97 3 0 chr5 5075929 5076229 -194553921 + AluSp SINE Alu 1 301 -12 5590 166 15 22 chr5 5076229 5076710 -194553440 + L1MA3 LINE L1 7240 7723 -1 411 269 0 14 chr5 5076756 5076901 -194553249 - L1MC3 LINE L1 -1114 5530 5388 310 216 85 45 chr5 5076918 5077094 -194553056 - L1MC3 LINE L1 -4413 2231 2049 467 31 10 188 chr5 5077137 5077177 -194552973 + MADE1 DNA Mariner 1 16 -64 2439 73 3 0 chr5 5077177 5077480 -194552670 - AluY SINE Alu -7 304 1 467 31 10 188 chr5 5077480 5077535 -194552615 + MADE1 DNA Mariner 16 79 -1 602 246 191 15 chr5 5077561 5077890 -194552260 - L1MC3 LINE L1 -4887 1759 1373 303 330 183 16 chr5 5077891 5078273 -194551877 - L1MC3 LINE L1 -5202 1344 899 278 295 9 9 chr5 5078351 5078456 -194551694 - L1MC3 LINE L1 -5668 874 770 396 296 24 19 chr5 5078928 5079134 -194551016 - L1MC3 LINE L1 -6320 222 16 553 234 0 7 chr5 5080369 5080523 -194549627 - L1MA10 LINE L1 -1 6333 6181 543 249 42 14 chr5 5080539 5080733 -194549417 + MLT1F1 LTR MaLR 388 565 -2 26 74 0 0 chr5 5080736 5080790 -194549360 + AT_rich Low_complexity Low_complexity 1 54 0 189 159 0 0 chr5 5082511 5082555 -194547595 + (TG)n Simple_repeat Simple_repeat 1 44 0 290 349 127 16 chr5 5083697 5083886 -194546264 + MIR SINE MIR 15 224 -38 188 381 0 0 chr5 5086174 5086271 -194543879 + L2 LINE L2 2397 2493 -821 553 117 53 12 chr5 5086851 5087022 -194543128 + (CA)n Simple_repeat Simple_repeat 1 178 0 449 86 43 0 chr5 5087102 5087195 -194542955 + (CA)n Simple_repeat Simple_repeat 2 98 0 24 0 0 0 chr5 5088137 5088161 -194541989 + AT_rich Low_complexity Low_complexity 1 24 0 1456 200 28 17 chr5 5088161 5088451 -194541699 - AluJo SINE Alu -19 293 1 201 94 0 0 chr5 5088490 5088522 -194541628 + (CA)n Simple_repeat Simple_repeat 1 32 0 231 36 0 0 chr5 5088811 5088839 -194541311 + (CA)n Simple_repeat Simple_repeat 2 29 0 26 64 0 0 chr5 5089264 5089311 -194540839 + AT_rich Low_complexity Low_complexity 1 47 0 225 247 23 132 chr5 5089829 5090003 -194540147 + MLT1H LTR MaLR 392 546 -3 364 391 31 9 chr5 5090647 5090872 -194539278 - MIR SINE MIR -17 245 16 192 125 0 0 chr5 5091300 5091332 -194538818 + (TG)n Simple_repeat Simple_repeat 1 32 0 2211 109 10 3 chr5 5092336 5092640 -194537510 - AluSc SINE Alu -3 306 1 2446 75 16 0 chr5 5093675 5093980 -194536170 - AluSg SINE Alu 0 310 1 561 232 91 17 chr5 5094334 5094542 -194535608 - MLT1C LTR MaLR -19 428 227 1831 172 0 26 chr5 5095335 5095643 -194534507 - AluSx SINE Alu -12 300 1 232 310 69 0 chr5 5096364 5096480 -194533670 + L2 LINE L2 3189 3312 -1 505 294 133 64 chr5 5096534 5096969 -194533181 - L2 LINE L2 -1 3312 2848 554 262 142 44 chr5 5097002 5097433 -194532717 + L2 LINE L2 2324 2796 -518 258 313 14 21 chr5 5097450 5097594 -194532556 - LTR33 LTR ERVL -2 519 377 33 25 0 0 chr5 5098257 5098297 -194531853 + AT_rich Low_complexity Low_complexity 1 40 0 275 143 0 18 chr5 5098324 5098380 -194531770 + (TG)n Simple_repeat Simple_repeat 1 55 0 1045 240 108 39 chr5 5098398 5098832 -194531318 - MLT2B1 LTR ERVL -54 466 3 21 0 0 0 chr5 5099156 5099177 -194530973 + AT_rich Low_complexity Low_complexity 1 21 0 1130 216 115 49 chr5 5099216 5099684 -194530466 + MLT1D LTR MaLR 7 505 0 432 266 147 39 chr5 5101136 5101422 -194528728 + L2 LINE L2 2027 2343 -971 383 305 107 27 chr5 5102805 5103067 -194527083 - L2 LINE L2 -11 3302 3020 210 91 0 0 chr5 5103099 5103132 -194527018 + (CA)n Simple_repeat Simple_repeat 2 34 0 374 309 0 5 chr5 5103147 5103361 -194526789 + (CA)n Simple_repeat Simple_repeat 1 212 0 459 356 0 0 chr5 5103375 5103555 -194526595 + (CA)n Simple_repeat Simple_repeat 1 180 0 2447 130 8 3 chr5 5103878 5104240 -194525910 + THE1B LTR MaLR 1 364 0 627 391 65 15 chr5 5104819 5105361 -194524789 + L3 LINE CR1 209 777 -800 65 35 0 0 chr5 5105845 5105931 -194524219 + AT_rich Low_complexity Low_complexity 1 86 0 23 0 0 0 chr5 5108266 5108289 -194521861 + AT_rich Low_complexity Low_complexity 1 23 0 689 209 0 0 chr5 5110652 5110800 -194519350 - L1MA3 LINE L1 0 6305 6158 816 155 128 59 chr5 5110804 5110960 -194519190 - MSTA LTR MaLR -228 200 56 1995 136 51 28 chr5 5110960 5111313 -194518837 + THE1B LTR MaLR 4 364 0 11443 105 3 5 chr5 5111313 5112896 -194517254 + THE1B-int LTR MaLR 1 1580 0 1917 140 68 31 chr5 5112896 5113247 -194516903 + THE1B LTR MaLR 1 364 0 816 155 128 59 chr5 5113247 5113275 -194516875 - MSTA LTR MaLR -371 57 1 3347 183 13 10 chr5 5113277 5113987 -194516163 - L1MA3 LINE L1 -145 6160 5449 2664 175 24 0 chr5 5113991 5114678 -194515472 + L1M1 LINE L1 4783 5489 -743 482 135 0 67 chr5 5114801 5114905 -194515245 - L1PB4 LINE L1 -8 6148 6052 1833 268 44 33 chr5 5114924 5115674 -194514476 - L1ME1 LINE L1 -4 6162 5405 22 0 0 0 chr5 5115927 5115949 -194514201 + AT_rich Low_complexity Low_complexity 1 22 0 195 69 0 0 chr5 5115972 5116001 -194514149 + (TATAA)n Simple_repeat Simple_repeat 2 30 0 4918 217 45 63 chr5 5116005 5117293 -194512857 + L1 LINE L1 3302 4551 -1595 826 86 0 0 chr5 5117293 5117409 -194512741 + L1PA13 LINE L1 6041 6156 -7 4918 217 45 63 chr5 5117409 5117909 -194512241 + L1 LINE L1 4551 5058 -1088 1840 264 28 10 chr5 5118250 5118856 -194511294 + L1MD3 LINE L1 7321 7937 -58 773 259 18 54 chr5 5118872 5119204 -194510946 - L1MA9 LINE L1 -40 6272 5953 776 268 20 0 chr5 5121673 5121923 -194508227 + L1MD3 LINE L1 7741 7995 0 277 301 87 0 chr5 5122422 5122525 -194507625 - L2 LINE L2 0 3272 3161 29 60 0 0 chr5 5124237 5124287 -194505863 + AT_rich Low_complexity Low_complexity 1 50 0 189 107 0 0 chr5 5124894 5124922 -194505228 + (GAAAA)n Simple_repeat Simple_repeat 4 31 0 21 36 0 0 chr5 5125803 5125831 -194504319 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr5 5127407 5127430 -194502720 + AT_rich Low_complexity Low_complexity 1 23 0 307 94 0 0 chr5 5129434 5129487 -194500663 + AluSc SINE Alu 247 299 0 265 335 98 56 chr5 5131243 5131724 -194498426 - L2 LINE L2 -3 3310 2810 561 228 35 7 chr5 5131901 5132046 -194498104 - Tigger7 DNA MER2_type 0 2587 2439 * 1646 186 39 6 chr5 5132041 5132374 -194497776 - Tigger7 DNA MER2_type -2143 344 1 669 323 26 9 chr5 5135758 5135990 -194494160 - MIR SINE MIR -18 244 9 738 236 33 19 chr5 5137766 5137978 -194492172 + MER20 DNA MER1_type 1 215 -4 855 108 8 0 chr5 5139227 5139356 -194490794 - L1PA7 LINE L1 -1 6153 6024 220 358 0 0 chr5 5139718 5139785 -194490365 + L2 LINE L2 2448 2514 -800 222 301 83 95 chr5 5140064 5140583 -194489567 - L2 LINE L2 -264 3049 2504 22 56 0 0 chr5 5143273 5143309 -194486841 + AT_rich Low_complexity Low_complexity 1 36 0 498 194 7 21 chr5 5143900 5144044 -194486106 + GA-rich Low_complexity Low_complexity 3 144 0 1778 185 13 3 chr5 5147099 5147521 -194482629 - AluJb SINE Alu 0 425 1 4736 91 48 14 chr5 5147563 5148276 -194481874 - L1PA11 LINE L1 -2 6172 5436 1152 220 81 55 chr5 5149515 5149790 -194480360 + MLT1C LTR MaLR 1 294 -173 2127 126 3 10 chr5 5149790 5150099 -194480051 + AluSq SINE Alu 5 311 -2 1152 220 81 55 chr5 5150099 5150278 -194479872 + MLT1C LTR MaLR 294 467 0 324 279 9 36 chr5 5152708 5152819 -194477331 + MIR SINE MIR 23 130 -132 481 268 118 52 chr5 5152851 5153232 -194476918 - LTR33A LTR ERVL 0 523 118 2691 92 16 3 chr5 5154382 5154752 -194475398 + THE1C LTR MaLR 1 375 0 414 129 5 4 chr5 5154782 5154992 -194475158 - AluSc SINE Alu -18 291 1 21 36 0 0 chr5 5155025 5155053 -194475097 + AT_rich Low_complexity Low_complexity 1 28 0 1282 137 11 157 chr5 5155054 5155411 -194474739 - L1MA4 LINE L1 -281 6019 5715 1998 153 3 0 chr5 5155437 5155737 -194474413 + AluSx SINE Alu 1 301 -11 302 271 126 13 chr5 5156381 5156532 -194473618 + MER58C DNA MER1_type 44 211 -4 302 260 30 40 chr5 5156615 5156715 -194473435 - L2 LINE L2 -6 3307 3209 501 291 77 52 chr5 5156748 5157150 -194473000 - MLT1H LTR MaLR 0 549 138 215 53 0 53 chr5 5159362 5159400 -194470750 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 747 326 94 32 chr5 5159905 5160160 -194469990 + L2 LINE L2 2445 2683 -630 360 0 0 0 chr5 5160160 5160200 -194469950 + (CA)n Simple_repeat Simple_repeat 2 41 0 747 326 94 32 chr5 5160200 5160754 -194469396 + L2 LINE L2 2683 3313 0 229 293 65 49 chr5 5160871 5160994 -194469156 + MIR SINE MIR 23 147 -61 929 230 102 59 chr5 5162803 5162865 -194467285 - MLT1C LTR MaLR -4 463 405 2707 75 0 0 chr5 5162865 5163213 -194466937 + L1PA7 LINE L1 5799 6146 -8 929 230 102 59 chr5 5163213 5163589 -194466561 - MLT1C LTR MaLR -62 405 6 268 301 81 97 chr5 5164157 5164343 -194465807 - MIR SINE MIR -12 250 68 21 0 0 0 chr5 5165315 5165336 -194464814 + AT_rich Low_complexity Low_complexity 1 21 0 1462 226 88 94 chr5 5166463 5167335 -194462815 + LTR28 LTR ERV1 1 1020 0 254 372 96 5 chr5 5167441 5167629 -194462521 + MIR SINE MIR 40 244 -18 188 357 161 0 chr5 5167975 5168087 -194462063 + L2 LINE L2 2931 3060 -253 1584 218 40 42 chr5 5168818 5169429 -194460721 + MLT1B-int LTR MaLR 1 726 -645 1304 264 59 25 chr5 5169769 5170174 -194459976 + MLT1B-int LTR MaLR 1317 1735 0 804 215 98 87 chr5 5170189 5170547 -194459603 + MLT1B LTR MaLR 13 374 -16 212 179 0 0 chr5 5171398 5171437 -194458713 + T-rich Low_complexity Low_complexity 1 39 0 1014 82 0 0 chr5 5171952 5172098 -194458052 + (CAT)n Simple_repeat Simple_repeat 3 148 0 743 215 145 8 chr5 5172470 5172712 -194457438 + L1ME1 LINE L1 5887 6161 -5 209 89 44 22 chr5 5174177 5174222 -194455928 + A-rich Low_complexity Low_complexity 2 47 0 1280 174 103 88 chr5 5174351 5174748 -194455402 + MER57A LTR ERV1 1 403 0 331 282 92 6 chr5 5176304 5176478 -194453672 + LTR16A LTR ERVL 161 349 -101 301 188 0 14 chr5 5176498 5176567 -194453583 - MLT2B1 LTR ERVL -47 367 300 198 0 0 0 chr5 5176595 5176617 -194453533 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 742 261 15 44 chr5 5176666 5176938 -194453212 - MLT2B1 LTR ERVL -255 265 2 681 231 11 0 chr5 5177275 5177461 -194452689 - MER53 DNA DNA -1 188 1 1407 229 54 9 chr5 5178723 5179072 -194451078 + MLT1A1 LTR MaLR 1 365 0 28 29 0 0 chr5 5179105 5179140 -194451010 + AT_rich Low_complexity Low_complexity 1 35 0 635 327 133 35 chr5 5179705 5180366 -194449784 - L2 LINE L2 -8 3305 2563 1972 129 7 0 chr5 5181148 5181451 -194448699 - AluSq SINE Alu 0 305 1 9307 199 22 20 chr5 5182500 5185876 -194444274 - L1MA6 LINE L1 -5 6295 2915 225 323 50 0 chr5 5188830 5188929 -194441221 + MIR SINE MIR 104 207 -55 1726 185 12 0 chr5 5188993 5189339 -194440811 - MLT1B LTR MaLR -40 350 1 281 285 123 37 chr5 5189490 5189865 -194440285 - L1ME4a LINE L1 -65 6056 5650 379 315 27 9 chr5 5189883 5189994 -194440156 + L2 LINE L2 3160 3272 0 1131 178 102 6 chr5 5191965 5192284 -194437866 - MER47B DNA MER2_type 0 418 1 262 361 31 0 chr5 5193142 5193239 -194436911 - MIR SINE MIR -73 135 36 249 299 11 35 chr5 5193908 5193995 -194436155 - MER5B DNA MER1_type -73 105 21 211 313 16 16 chr5 5193938 5194002 -194436148 + MER5A DNA MER1_type 113 176 -13 * 597 219 55 7 chr5 5195294 5195440 -194434710 - MER5A DNA MER1_type -34 155 3 295 160 0 0 chr5 5196336 5196386 -194433764 + MER5A DNA MER1_type 3 52 -137 36 23 0 0 chr5 5196743 5196786 -194433364 + AT_rich Low_complexity Low_complexity 1 43 0 260 311 53 62 chr5 5201911 5202233 -194427917 - L1MEd LINE L1 -5483 636 318 499 168 40 12 chr5 5202704 5202877 -194427273 + (TGGA)n Simple_repeat Simple_repeat 3 180 0 21 36 0 0 chr5 5204222 5204250 -194425900 + AT_rich Low_complexity Low_complexity 1 28 0 611 62 0 0 chr5 5204445 5204525 -194425625 + MADE1 DNA Mariner 1 80 0 526 261 109 32 chr5 5205181 5205584 -194424566 + MLT1J LTR MaLR 1 511 0 343 329 57 14 chr5 5206332 5206472 -194423678 - L2 LINE L2 -1 3312 3167 308 298 56 76 chr5 5207157 5207355 -194422795 - L1ME2 LINE L1 -23 6141 5948 1324 246 39 48 chr5 5207407 5208114 -194422036 - L1ME3A LINE L1 -298 5864 5153 3188 3 0 6 chr5 5208130 5208492 -194421658 - L1PA2 LINE L1 0 6155 5796 390 21 0 0 chr5 5210861 5210908 -194419242 + (CA)n Simple_repeat Simple_repeat 2 48 0 1371 217 37 80 chr5 5214824 5215312 -194414838 - MLT1C LTR MaLR 0 467 1 306 0 0 0 chr5 5215562 5215596 -194414554 + (TG)n Simple_repeat Simple_repeat 1 34 0 1763 103 91 0 chr5 5216074 5216337 -194413813 + AluSx SINE Alu 1 287 -25 472 239 45 30 chr5 5217271 5217405 -194412745 - L2 LINE L2 0 3313 3178 2064 134 0 13 chr5 5217742 5218056 -194412094 - AluSg SINE Alu 0 310 1 181 365 21 21 chr5 5218334 5218430 -194411720 + L2 LINE L2 2589 2684 -630 2811 60 0 0 chr5 5218510 5218863 -194411287 - L1PA8 LINE L1 -3 6169 5817 2505 60 0 19 chr5 5219360 5219675 -194410475 + AluY SINE Alu 1 309 -2 235 102 20 20 chr5 5220866 5220915 -194409235 + (TA)n Simple_repeat Simple_repeat 1 49 0 325 146 8 49 chr5 5220974 5221097 -194409053 + (TA)n Simple_repeat Simple_repeat 1 118 0 396 201 0 50 chr5 5221151 5221330 -194408820 + (TA)n Simple_repeat Simple_repeat 1 170 0 468 172 0 59 chr5 5221354 5221823 -194408327 + (TA)n Simple_repeat Simple_repeat 1 441 0 1591 172 58 3 chr5 5222564 5222855 -194407295 + AluJo SINE Alu 2 308 -4 323 333 32 0 chr5 5223914 5224040 -194406110 + (TATG)n Simple_repeat Simple_repeat 2 131 0 520 250 11 0 chr5 5224042 5224218 -194405932 + (TA)n Simple_repeat Simple_repeat 1 178 0 702 344 4 0 chr5 5224242 5224472 -194405678 - MIR SINE MIR -12 250 20 982 206 54 10 chr5 5224480 5224684 -194405466 - MER20 DNA MER1_type 0 219 7 234 270 119 16 chr5 5224736 5224862 -194405288 - L1ME4a LINE L1 -31 6090 5952 1499 203 3 14 chr5 5224923 5225241 -194404909 - AluJo SINE Alu 0 312 1 21 82 0 0 chr5 5225390 5225439 -194404711 + AT_rich Low_complexity Low_complexity 1 49 0 818 169 19 20 chr5 5225843 5226110 -194404040 + AluJ SINE Alu 7 306 -6 24 32 0 0 chr5 5226149 5226180 -194403970 + AT_rich Low_complexity Low_complexity 1 31 0 261 0 0 0 chr5 5226273 5226302 -194403848 + (TG)n Simple_repeat Simple_repeat 2 30 0 252 59 0 0 chr5 5227198 5227232 -194402918 + (TG)n Simple_repeat Simple_repeat 2 35 0 2595 173 12 12 chr5 5228010 5228276 -194401874 - MSTA LTR MaLR 0 428 160 2440 34 40 7 chr5 5228276 5228574 -194401576 + AluY SINE Alu 1 308 -3 2595 173 12 12 chr5 5228574 5228734 -194401416 - MSTA LTR MaLR -267 161 2 709 250 10 39 chr5 5229443 5229651 -194400499 + MER20 DNA MER1_type 14 215 -4 1913 125 16 13 chr5 5230134 5230439 -194399711 - AluSx SINE Alu -6 306 1 2290 100 0 13 chr5 5230900 5231211 -194398939 + AluSx SINE Alu 1 307 -5 445 331 0 0 chr5 5231473 5231603 -194398547 + GA-rich Low_complexity Low_complexity 2 131 0 207 286 48 36 chr5 5231806 5231890 -194398260 - L2 LINE L2 -20 3252 3168 423 0 0 0 chr5 5232329 5232376 -194397774 + (CA)n Simple_repeat Simple_repeat 2 48 0 23 33 0 0 chr5 5233806 5233836 -194396314 + AT_rich Low_complexity Low_complexity 1 30 0 23 33 0 0 chr5 5234253 5234283 -194395867 + AT_rich Low_complexity Low_complexity 1 30 0 1685 309 68 25 chr5 5234290 5234660 -194395490 + L1MEc LINE L1 297 650 -5746 2209 110 3 10 chr5 5234660 5234968 -194395182 + AluSq SINE Alu 3 308 -5 1685 309 68 25 chr5 5234968 5235605 -194394545 + L1MEc LINE L1 650 1347 -5049 401 285 27 37 chr5 5235767 5235991 -194394159 - L1MCa LINE L1 -894 1893 1511 586 293 86 80 chr5 5236041 5236427 -194393723 + MLT1F1 LTR MaLR 3 390 -152 4880 115 1 0 chr5 5236429 5237090 -194393060 + THE1A-int LTR MaLR 919 1580 0 2557 113 6 8 chr5 5237090 5237444 -194392706 + THE1A LTR MaLR 1 353 -2 420 281 114 33 chr5 5237685 5237895 -194392255 + MIR SINE MIR 6 232 -30 187 356 20 20 chr5 5238309 5238410 -194391740 + MIR3 SINE MIR 65 165 -43 2364 157 3 3 chr5 5238419 5238783 -194391367 + THE1B LTR MaLR 1 364 0 931 276 85 34 chr5 5239977 5240329 -194389821 - MLT1A2 LTR MaLR -4 370 1 22 0 0 0 chr5 5240687 5240709 -194389441 + AT_rich Low_complexity Low_complexity 1 22 0 2352 110 0 0 chr5 5241374 5241684 -194388466 - AluSx SINE Alu -2 310 1 226 228 98 43 chr5 5242091 5242183 -194387967 + MIR SINE MIR 94 190 -72 264 300 31 31 chr5 5244429 5244559 -194385591 - MER5A DNA MER1_type -6 183 54 27 29 0 0 chr5 5244680 5244714 -194385436 + AT_rich Low_complexity Low_complexity 1 34 0 210 37 0 0 chr5 5245760 5245787 -194384363 + (CA)n Simple_repeat Simple_repeat 2 28 0 294 182 58 0 chr5 5245791 5245945 -194384205 + (TA)n Simple_repeat Simple_repeat 2 164 0 1680 175 77 72 chr5 5246111 5246499 -194383651 - MLT1B LTR MaLR 0 390 1 200 91 0 30 chr5 5247652 5247685 -194382465 + (CAAAAA)n Simple_repeat Simple_repeat 2 33 0 2069 144 7 0 chr5 5248308 5248640 -194381510 + AluSg SINE Alu 1 334 0 1683 175 0 0 chr5 5248640 5248914 -194381236 + MER7A DNA MER2_type 65 336 -10 608 214 27 86 chr5 5250094 5250314 -194379836 + MIR SINE MIR 32 238 -24 224 174 0 22 chr5 5250328 5250374 -194379776 + (TTA)n Simple_repeat Simple_repeat 1 45 0 2094 131 3 0 chr5 5251895 5252192 -194377958 + AluSq SINE Alu 1 298 -15 2265 85 0 33 chr5 5255685 5255990 -194374160 - AluY SINE Alu -16 295 1 1402 127 0 0 chr5 5256032 5256244 -194373906 + AluSg/x SINE Alu 98 309 -3 915 104 7 30 chr5 5256393 5256528 -194373622 - L1PB1 LINE L1 -4 6147 6016 2337 163 5 21 chr5 5257336 5257717 -194372433 - THE1C LTR MaLR 0 375 1 757 231 14 53 chr5 5258197 5258405 -194371745 - MER20 DNA MER1_type -18 201 2 719 262 99 26 chr5 5258433 5258666 -194371484 - MIR SINE MIR -16 246 1 686 311 101 15 chr5 5259066 5259646 -194370504 + L1MC4 LINE L1 6336 7062 -980 2182 128 0 10 chr5 5259730 5260043 -194370107 - AluSx SINE Alu -2 310 1 381 271 62 8 chr5 5260329 5260458 -194369692 + L1MC4a LINE L1 7275 7410 -398 334 243 7 30 chr5 5261812 5262118 -194368032 + GA-rich Low_complexity Low_complexity 1 298 0 29 47 0 0 chr5 5262458 5262501 -194367649 + AT_rich Low_complexity Low_complexity 1 43 0 1874 142 35 0 chr5 5264532 5264821 -194365329 + AluSq SINE Alu 1 299 -14 922 281 29 32 chr5 5265358 5265735 -194364415 + L1MC4a LINE L1 6542 6917 -891 3582 150 47 66 chr5 5266536 5267123 -194363027 - MER50 LTR ERV1 -23 711 139 1994 129 37 0 chr5 5267123 5267418 -194362732 - AluSx SINE Alu -6 306 1 3582 150 47 66 chr5 5267418 5267555 -194362595 - MER50 LTR ERV1 -595 139 1 3582 166 33 24 chr5 5267961 5268893 -194361257 + L1MA4 LINE L1 4647 5606 -694 1994 138 3 0 chr5 5268893 5269182 -194360968 + AluSp SINE Alu 2 291 -22 3582 166 33 24 chr5 5269182 5269523 -194360627 + L1MA4 LINE L1 5606 5943 -357 2188 128 0 0 chr5 5270359 5270656 -194359494 + AluSx SINE Alu 3 299 -13 1317 219 92 73 chr5 5270795 5271079 -194359071 + MER77 LTR ERV1 180 522 -155 1727 149 34 3 chr5 5271079 5271375 -194358775 - AluSx SINE Alu -3 309 5 1317 219 92 73 chr5 5271375 5271530 -194358620 + MER77 LTR ERV1 522 673 -4 1130 261 156 75 chr5 5271642 5272953 -194357197 - HAL1 LINE L1 -1 2506 1090 23 86 0 0 chr5 5272975 5273033 -194357117 + AT_rich Low_complexity Low_complexity 1 58 0 571 277 158 55 chr5 5273112 5273636 -194356514 - HAL1 LINE L1 -1433 1074 497 234 229 330 0 chr5 5273742 5273851 -194356299 - HAL1 LINE L1 -2341 166 22 192 77 0 0 chr5 5275004 5275030 -194355120 + (TTTC)n Simple_repeat Simple_repeat 3 28 0 2480 60 13 3 chr5 5278830 5279130 -194351020 - AluY SINE Alu -8 303 1 631 132 88 0 chr5 5279527 5279641 -194350509 + MSTB LTR MaLR 1 124 -302 32 57 0 0 chr5 5283199 5283252 -194346898 + AT_rich Low_complexity Low_complexity 1 53 0 414 0 0 0 chr5 5283291 5283337 -194346813 + (TG)n Simple_repeat Simple_repeat 2 47 0 1894 169 0 0 chr5 5285193 5285489 -194344661 - AluSx SINE Alu -16 296 1 1654 236 97 39 chr5 5287118 5287257 -194342893 + MLT1F1 LTR MaLR 1 131 -436 1707 196 58 3 chr5 5287257 5287603 -194342547 + MLT1A1 LTR MaLR 1 365 0 1654 236 97 39 chr5 5287603 5287998 -194342152 + MLT1F1 LTR MaLR 131 566 -1 827 329 19 3 chr5 5288008 5288330 -194341820 + L1ME3A LINE L1 5655 5981 -189 743 263 56 5 chr5 5288399 5288612 -194341538 - MER58A DNA MER1_type 0 224 1 279 346 93 33 chr5 5289823 5290222 -194339928 + HsTC2 DNA Tc2 469 891 -1007 197 0 71 0 chr5 5291359 5291387 -194338763 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 22 35 0 0 chr5 5291714 5291743 -194338407 + AT_rich Low_complexity Low_complexity 1 29 0 677 149 11 33 chr5 5291769 5291950 -194338200 + GA-rich Low_complexity Low_complexity 2 178 0 330 93 13 53 chr5 5291950 5292025 -194338125 + (GAAA)n Simple_repeat Simple_repeat 1 72 0 195 184 0 0 chr5 5293311 5293349 -194336801 + CT-rich Low_complexity Low_complexity 2 39 0 345 197 0 0 chr5 5293795 5293871 -194336279 + GA-rich Low_complexity Low_complexity 3 78 0 21 0 0 0 chr5 5295658 5295679 -194334471 + AT_rich Low_complexity Low_complexity 1 21 0 2924 194 28 36 chr5 5296287 5296450 -194333700 + L1MC3 LINE L1 7050 7213 -572 2150 91 13 39 chr5 5296450 5296758 -194333392 - AluY SINE Alu -11 300 1 2924 194 28 36 chr5 5296758 5297208 -194332942 + L1MC3 LINE L1 7213 7658 -127 791 146 0 6 chr5 5298416 5298580 -194331570 + (TG)n Simple_repeat Simple_repeat 2 164 0 249 33 0 0 chr5 5302020 5302050 -194328100 + (T)n Simple_repeat Simple_repeat 1 30 0 2463 53 0 7 chr5 5304685 5304987 -194325163 - AluY SINE Alu -11 300 1 315 0 0 0 chr5 5305503 5305538 -194324612 + (TG)n Simple_repeat Simple_repeat 2 36 0 278 267 0 0 chr5 5305662 5305722 -194324428 + MER63 DNA MER1_type 688 747 -313 229 188 21 0 chr5 5305725 5305773 -194324377 + MER63 DNA MER1_type 978 1026 -35 2624 199 25 12 chr5 5305967 5306455 -194323695 - MER21B LTR ERV1 -369 494 1 189 0 0 0 chr5 5307134 5307155 -194322995 + (CA)n Simple_repeat Simple_repeat 1 21 0 422 330 112 31 chr5 5358352 5358710 -194271440 + L2 LINE L2 231 617 -2697 1099 255 55 16 chr5 5358731 5359188 -194270962 + MLT2B1 LTR ERVL 3 534 -20 419 353 145 22 chr5 5359422 5359878 -194270272 + L2 LINE L2 451 962 -2352 21 104 0 0 chr5 5359906 5359983 -194270167 + AT_rich Low_complexity Low_complexity 1 77 0 324 337 58 5 chr5 5360046 5360251 -194269899 - L1MC4a LINE L1 -1750 6058 5843 1990 155 0 0 chr5 5360251 5360576 -194269574 + AluSx SINE Alu 1 325 0 3102 211 59 22 chr5 5360611 5361528 -194268622 - L1MB2 LINE L1 -45 6126 5174 1451 199 80 0 chr5 5361534 5361896 -194268254 - L1MD3 LINE L1 -173 7822 7432 40138 47 22 2 chr5 5361900 5367930 -194262220 - L1PA2 LINE L1 -4 6151 1 2082 234 63 9 chr5 5367926 5368597 -194261553 - L1MB2 LINE L1 -947 5199 4493 * 285 230 63 40 chr5 5368678 5368804 -194261346 - L1MC4a LINE L1 -2066 5742 5614 1126 71 7 7 chr5 5368856 5369011 -194261139 - L1PB1 LINE L1 -1 6150 5996 421 332 96 32 chr5 5369099 5369845 -194260305 - L1MC4a LINE L1 -946 5200 4377 275 338 37 19 chr5 5370129 5370452 -194259698 + L1M4 LINE L1 3733 4061 -2085 3181 254 65 31 chr5 5371910 5372454 -194257696 - L1M4 LINE L1 -1471 4675 4151 1070 260 109 60 chr5 5372454 5373051 -194257099 + MLT1E2 LTR MaLR 1 626 0 3181 254 65 31 chr5 5373051 5374359 -194255791 - L1M4 LINE L1 -1995 4151 2760 206 347 0 0 chr5 5375616 5375691 -194254459 + (TATATG)n Simple_repeat Simple_repeat 3 77 0 209 30 61 0 chr5 5376728 5376761 -194253389 + (CAGA)n Simple_repeat Simple_repeat 1 35 0 306 0 0 0 chr5 5381873 5381907 -194248243 + (CA)n Simple_repeat Simple_repeat 2 35 0 186 216 198 45 chr5 5381958 5382069 -194248081 - MIR SINE MIR -71 191 64 350 306 32 8 chr5 5382083 5382207 -194247943 + MIR SINE MIR 13 139 -123 186 191 0 0 chr5 5382358 5382400 -194247750 + CT-rich Low_complexity Low_complexity 2 43 0 401 145 13 0 chr5 5382436 5382512 -194247638 + CT-rich Low_complexity Low_complexity 3 79 0 186 133 0 0 chr5 5382689 5382719 -194247431 + (T)n Simple_repeat Simple_repeat 1 30 0 22 0 0 0 chr5 5383630 5383652 -194246498 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5 5387068 5387089 -194243061 + AT_rich Low_complexity Low_complexity 1 21 0 21 82 0 0 chr5 5387460 5387509 -194242641 + AT_rich Low_complexity Low_complexity 1 49 0 1292 177 0 57 chr5 5387662 5387910 -194242240 + AluSq SINE Alu 1 234 -79 254 299 52 31 chr5 5388152 5388249 -194241901 - L2 LINE L2 -15 3298 3200 275 244 13 13 chr5 5388513 5388591 -194241559 + MIR SINE MIR 156 233 -29 304 262 52 95 chr5 5388695 5389000 -194241150 - L2 LINE L2 -640 2674 2383 239 291 145 37 chr5 5389962 5390258 -194239892 - MLT1J1 LTR MaLR -41 405 78 22 35 0 0 chr5 5391158 5391187 -194238963 + AT_rich Low_complexity Low_complexity 1 29 0 2315 105 3 0 chr5 5391309 5391605 -194238545 + AluSp SINE Alu 1 297 -16 320 298 65 48 chr5 5391698 5392098 -194238052 + L1M4 LINE L1 4513 4919 -1227 2920 91 3 0 chr5 5392188 5392551 -194237599 + THE1B LTR MaLR 1 364 0 270 212 9 88 chr5 5392910 5393023 -194237127 + L1M LINE L1 5326 5429 -2379 197 265 59 15 chr5 5393089 5393157 -194236993 - L2 LINE L2 0 3313 3243 24 77 0 0 chr5 5393444 5393496 -194236654 + AT_rich Low_complexity Low_complexity 1 52 0 24 67 0 0 chr5 5395084 5395129 -194235021 + AT_rich Low_complexity Low_complexity 1 45 0 23 68 0 0 chr5 5396102 5396146 -194234004 + AT_rich Low_complexity Low_complexity 1 44 0 203 0 37 0 chr5 5397244 5397271 -194232879 + (TG)n Simple_repeat Simple_repeat 1 28 0 2143 159 85 10 chr5 5400087 5400477 -194229673 - MSTA LTR MaLR 0 428 10 1900 195 34 6 chr5 5400629 5400978 -194229172 + MLT1A1 LTR MaLR 7 365 0 1158 233 131 23 chr5 5401078 5401484 -194228666 + MLT1C LTR MaLR 1 446 -11 967 318 23 8 chr5 5401493 5401845 -194228305 + ERVL LTR ERVL 830 1186 -3810 866 259 63 22 chr5 5402202 5402519 -194227631 + ERVL LTR ERVL 1675 2004 -2992 446 291 58 39 chr5 5402548 5402754 -194227396 + LTR1B LTR ERV1 39 248 -578 570 249 65 6 chr5 5402793 5402962 -194227188 + LTR28 LTR ERV1 396 574 -446 229 242 20 141 chr5 5402974 5403123 -194227027 + LTR28 LTR ERV1 848 978 -42 1187 345 28 13 chr5 5403169 5403772 -194226378 + ERVL LTR ERVL 2029 2640 -3014 420 365 14 0 chr5 5403820 5403965 -194226185 + ERVL LTR ERVL 2713 2859 -2137 323 292 44 9 chr5 5404008 5404121 -194226029 + ERVL LTR ERVL 2937 3053 -1943 290 312 49 28 chr5 5404255 5404502 -194225648 + ERVL LTR ERVL 3288 3539 -2225 569 332 80 44 chr5 5404539 5405516 -194224634 + ERVL LTR ERVL 3275 4610 -1154 273 319 9 0 chr5 5406120 5406236 -194223914 + LTR16A LTR ERVL 256 372 -78 276 284 121 21 chr5 5406788 5406929 -194223221 - MIR SINE MIR -86 176 22 273 283 33 33 chr5 5412430 5412522 -194217628 + GA-rich Low_complexity Low_complexity 4 95 0 1342 234 62 9 chr5 5413308 5413645 -194216505 + MLT1A1 LTR MaLR 11 365 0 243 333 24 0 chr5 5414104 5414188 -194215962 - L2 LINE L2 -4 3309 3224 343 322 54 20 chr5 5414405 5414554 -194215596 - L2 LINE L2 -250 3063 2910 181 306 85 45 chr5 5415103 5415302 -194214848 - L2 LINE L2 -416 2898 2692 21 0 0 0 chr5 5415378 5415399 -194214751 + AT_rich Low_complexity Low_complexity 1 21 0 195 291 154 62 chr5 5415638 5416061 -194214089 - L2 LINE L2 -475 2839 2378 5336 177 23 11 chr5 5416165 5417390 -194212760 + L1MA4 LINE L1 5062 6300 0 1688 187 31 48 chr5 5417448 5417532 -194212618 + MER7A DNA MER2_type 2 86 -2952 1907 119 50 11 chr5 5417532 5417809 -194212341 - AluSx SINE Alu -24 288 1 1688 187 31 48 chr5 5417809 5418077 -194212073 + MER7A DNA MER2_type 86 346 0 479 237 26 103 chr5 5418444 5418676 -194211474 - MLT1I LTR MaLR 0 409 196 1915 77 0 104 chr5 5419114 5419441 -194210709 - L1P LINE L1 -921 5225 4933 26 30 0 0 chr5 5422231 5422264 -194207886 + AT_rich Low_complexity Low_complexity 1 33 0 341 266 28 9 chr5 5423930 5424039 -194206111 - L1MC4 LINE L1 -134 7908 7798 269 333 123 49 chr5 5424563 5424806 -194205344 + L2 LINE L2 3053 3313 0 356 360 114 24 chr5 5425241 5425979 -194204171 - L1M4 LINE L1 -2969 3177 2374 202 282 0 0 chr5 5426102 5426173 -194203977 + A-rich Low_complexity Low_complexity 1 71 0 186 143 0 0 chr5 5426205 5426240 -194203910 + (CA)n Simple_repeat Simple_repeat 2 36 0 1502 214 3 28 chr5 5426458 5426775 -194203375 + AluJb SINE Alu 1 309 -3 300 281 133 56 chr5 5427301 5427497 -194202653 + L1MC4a LINE L1 5783 5993 -1815 1793 186 0 0 chr5 5427621 5427901 -194202249 - AluJb SINE Alu -20 292 13 247 308 97 43 chr5 5428004 5428446 -194201704 + L1MC4a LINE L1 6219 6684 -1124 12176 207 48 15 chr5 5428564 5429303 -194200847 + L1M1 LINE L1 16 729 -6927 180 77 0 0 chr5 5429303 5429329 -194200821 + (TAA)n Simple_repeat Simple_repeat 2 27 0 12176 207 48 15 chr5 5429329 5433800 -194196350 + L1M1 LINE L1 729 6913 -743 369 221 59 22 chr5 5434082 5434218 -194195932 + L1MC4 LINE L1 7110 7250 -792 217 158 26 0 chr5 5435407 5435445 -194194705 + (TG)n Simple_repeat Simple_repeat 2 40 0 301 276 76 9 chr5 5436675 5436780 -194193370 - MIR3 SINE MIR -12 196 85 1129 260 123 20 chr5 5437536 5437586 -194192564 + L1MD3 LINE L1 6550 6593 -1265 273 29 0 0 chr5 5437586 5437620 -194192530 + (CA)n Simple_repeat Simple_repeat 1 34 0 1129 260 123 20 chr5 5437620 5438200 -194191950 + L1MD3 LINE L1 6593 7275 -583 481 227 47 0 chr5 5438204 5438332 -194191818 + MLT1F1 LTR MaLR 2 135 -432 21 0 0 0 chr5 5438861 5438882 -194191268 + AT_rich Low_complexity Low_complexity 1 21 0 2560 45 0 10 chr5 5439002 5439315 -194190835 - AluY SINE Alu -1 310 1 272 306 0 9 chr5 5439650 5439761 -194190389 + (CTA)n Simple_repeat Simple_repeat 1 110 0 519 155 0 0 chr5 5439766 5439869 -194190281 + (CCA)n Simple_repeat Simple_repeat 1 103 0 541 263 23 0 chr5 5439912 5440045 -194190105 + MER45A DNA AcHobo 3 138 -40 237 227 91 15 chr5 5440045 5440111 -194190039 - L1MCa LINE L1 -6330 96 26 194 0 0 37 chr5 5443147 5443174 -194186976 + (TTA)n Simple_repeat Simple_repeat 2 27 0 417 45 5 119 chr5 5444375 5444577 -194185573 + (TA)n Simple_repeat Simple_repeat 1 179 0 282 77 15 77 chr5 5444602 5444732 -194185418 + (TA)n Simple_repeat Simple_repeat 1 122 0 189 0 0 0 chr5 5446320 5446341 -194183809 + (CA)n Simple_repeat Simple_repeat 1 21 0 384 313 0 11 chr5 5446361 5446540 -194183610 + (CA)n Simple_repeat Simple_repeat 2 178 0 344 341 0 6 chr5 5446600 5446767 -194183383 + (CA)n Simple_repeat Simple_repeat 1 166 0 275 294 26 3 chr5 5447695 5447826 -194182324 - MIR SINE MIR -62 146 13 190 356 70 9 chr5 5447916 5448031 -194182119 - MIR3 SINE MIR -2 206 85 546 146 188 48 chr5 5449357 5449522 -194180628 - MER4A LTR ERV1 -1 464 277 2000 125 8 55 chr5 5449540 5450024 -194180126 - MER4A LTR ERV1 -241 423 1 1273 213 47 18 chr5 5450734 5451072 -194179078 + MLT2D LTR ERVL 7 354 -60 200 234 0 16 chr5 5451157 5451221 -194178929 + (CATATA)n Simple_repeat Simple_repeat 6 68 0 264 130 0 0 chr5 5451234 5451280 -194178870 + (CA)n Simple_repeat Simple_repeat 1 46 0 1533 160 110 22 chr5 5451286 5451605 -194178545 + MER7A DNA MER2_type 1 345 -1 276 111 0 0 chr5 5451605 5451650 -194178500 + (TC)n Simple_repeat Simple_repeat 1 45 0 977 200 53 12 chr5 5452379 5452735 -194177415 + MLT2B3 LTR ERVL 183 554 0 384 260 60 7 chr5 5452815 5452965 -194177185 - MER106B DNA MER1_type -4 1055 898 288 67 22 0 chr5 5453732 5453777 -194176373 - MADE1 DNA Mariner -34 46 1 254 357 31 10 chr5 5455619 5455717 -194174433 - MIR SINE MIR -115 147 48 1388 175 0 0 chr5 5457220 5457437 -194172713 + AluSx SINE Alu 6 222 -90 486 0 0 0 chr5 5457443 5457497 -194172653 + (TAA)n Simple_repeat Simple_repeat 3 56 0 751 253 52 18 chr5 5457497 5457884 -194172266 - L1M4 LINE L1 -2840 4117 3718 2235 104 13 10 chr5 5458457 5458765 -194171385 + AluSx SINE Alu 1 309 -3 602 216 36 18 chr5 5458929 5459151 -194170999 + L1M4 LINE L1 2996 3221 -2925 2025 146 123 5 chr5 5459349 5459732 -194170418 - MSTA LTR MaLR 0 428 1 716 328 123 5 chr5 5459750 5460155 -194169995 - L1M4 LINE L1 -6071 788 336 1805 142 178 8 chr5 5460205 5460571 -194169579 + MSTA LTR MaLR 1 428 0 6009 163 21 42 chr5 5460573 5461783 -194168367 + MSTA-int LTR MaLR 3 1187 -393 1566 200 14 19 chr5 5462341 5462701 -194167449 - L1MD1 LINE L1 -3 6239 5882 2161 113 0 12 chr5 5462737 5463083 -194167067 + L1PB1 LINE L1 5438 5779 -372 554 41 14 0 chr5 5463084 5463157 -194166993 + (TAGA)n Simple_repeat Simple_repeat 4 77 0 552 192 17 0 chr5 5463157 5463277 -194166873 - L1MD1 LINE L1 -45 6197 6076 408 20 0 0 chr5 5463285 5463334 -194166816 + (TAGA)n Simple_repeat Simple_repeat 4 52 0 2089 128 48 0 chr5 5463334 5463669 -194166481 + L1PB1 LINE L1 5799 6149 -2 427 233 166 38 chr5 5463691 5464190 -194165960 + Charlie2 DNA MER1_type 2276 2838 -24 1235 219 26 89 chr5 5465424 5465514 -194164636 + MLT1B LTR MaLR 1 95 -295 2116 149 16 19 chr5 5465514 5465890 -194164260 + THE1C LTR MaLR 1 375 0 1235 219 26 89 chr5 5465890 5466215 -194163935 + MLT1B LTR MaLR 95 390 0 1715 189 0 0 chr5 5466960 5467251 -194162899 - AluJb SINE Alu -21 291 1 782 267 84 28 chr5 5468270 5468340 -194161810 - LTR52 LTR ERVL -3 418 353 444 51 0 0 chr5 5468340 5468399 -194161751 + (CA)n Simple_repeat Simple_repeat 2 60 0 782 267 84 28 chr5 5468399 5468721 -194161429 - LTR52 LTR ERVL -68 353 4 1469 233 20 7 chr5 5470457 5470860 -194159290 - L1MD1 LINE L1 0 6242 5835 895 198 28 75 chr5 5470863 5471222 -194158928 - L1MDa LINE L1 -4767 1773 1432 399 106 0 0 chr5 5471333 5471399 -194158751 + (TG)n Simple_repeat Simple_repeat 1 66 0 11736 186 2 0 chr5 5471697 5475129 -194155021 + L1PA14 LINE L1 2766 6160 -1 2371 72 0 0 chr5 5475768 5476059 -194154091 - AluY SINE Alu -20 291 1 378 306 69 43 chr5 5478697 5478929 -194151221 - MIR SINE MIR -16 246 9 1711 248 46 36 chr5 5479274 5479798 -194150352 - MER65B LTR ERV1 0 531 3 1834 233 80 19 chr5 5479924 5480400 -194149750 - MLT1D LTR MaLR 0 505 1 326 201 136 82 chr5 5480539 5480723 -194149427 + L1MB3 LINE L1 3580 3773 -2373 43662 31 25 1 chr5 5480771 5486779 -194143371 + L1PA2 LINE L1 3 6155 0 343 260 64 87 chr5 5486779 5486952 -194143198 + L1MB3 LINE L1 3842 4010 -2136 319 264 31 54 chr5 5486959 5487088 -194143062 + L1MB3 LINE L1 5308 5433 -2375 545 128 21 11 chr5 5487431 5487525 -194142625 + L1PA14 LINE L1 6066 6160 -1 333 358 65 20 chr5 5487760 5488101 -194142049 + L1M4 LINE L1 3965 4320 -1826 6348 175 56 58 chr5 5488153 5490321 -194139829 + L1M4c LINE L1 391 2656 -3726 805 225 110 23 chr5 5490335 5490553 -194139597 + L1MB3 LINE L1 5929 6165 -18 303 180 0 0 chr5 5490574 5490624 -194139526 - MLT1C LTR MaLR -59 408 359 789 249 100 33 chr5 5491069 5491398 -194138752 - MLT1C LTR MaLR -116 351 1 436 269 159 16 chr5 5491407 5491563 -194138587 - MIR SINE MIR -58 150 16 223 217 22 0 chr5 5493173 5493219 -194136931 + GA-rich Low_complexity Low_complexity 2 48 0 249 331 39 62 chr5 5494936 5495066 -194135084 - L2 LINE L2 -5 3308 3182 1130 281 19 11 chr5 5495316 5495683 -194134467 - MER63B DNA MER1_type -66 370 1 2609 29 0 16 chr5 5495841 5496157 -194133993 - AluY SINE Alu 0 311 1 2911 91 18 2 chr5 5497990 5498384 -194131766 - L1PA10 LINE L1 0 6168 5769 22 0 0 0 chr5 5500707 5500729 -194129421 + AT_rich Low_complexity Low_complexity 1 22 0 24 91 0 0 chr5 5501127 5501193 -194128957 + AT_rich Low_complexity Low_complexity 1 66 0 189 0 0 0 chr5 5503115 5503136 -194127014 + (A)n Simple_repeat Simple_repeat 1 21 0 225 65 0 0 chr5 5503172 5503203 -194126947 + (TC)n Simple_repeat Simple_repeat 2 32 0 255 31 0 0 chr5 5503203 5503235 -194126915 + (CA)n Simple_repeat Simple_repeat 1 32 0 469 160 30 8 chr5 5506780 5506911 -194123239 + (TA)n Simple_repeat Simple_repeat 2 135 0 2260 105 0 3 chr5 5507361 5507667 -194122483 + AluSg SINE Alu 1 305 -5 282 29 0 0 chr5 5507750 5507785 -194122365 + (TG)n Simple_repeat Simple_repeat 2 36 0 1530 149 65 68 chr5 5508498 5508853 -194121297 - MLT1A2 LTR MaLR -20 354 1 25 0 0 0 chr5 5508960 5508985 -194121165 + AT_rich Low_complexity Low_complexity 1 25 0 3004 127 7 7 chr5 5509927 5510361 -194119789 - MER57B LTR ERV1 0 434 1 436 174 51 14 chr5 5510982 5511120 -194119030 + CT-rich Low_complexity Low_complexity 4 146 0 1783 158 35 0 chr5 5511125 5511409 -194118741 - AluJb SINE Alu -8 304 11 209 77 51 0 chr5 5511703 5511742 -194118408 + (TCTCTG)n Simple_repeat Simple_repeat 2 42 0 1049 250 28 0 chr5 5511830 5512082 -194118068 + L1ME3 LINE L1 5896 6154 -8 245 196 0 0 chr5 5512797 5512843 -194117307 - L2 LINE L2 -4 3309 3264 732 316 5 5 chr5 5513113 5513331 -194116819 - MIR SINE MIR -42 220 3 813 277 81 63 chr5 5513809 5514339 -194115811 + MLT1F1 LTR MaLR 18 559 -8 241 275 154 0 chr5 5514854 5514945 -194115205 - L2 LINE L2 -5 3308 3204 195 111 0 0 chr5 5514991 5515018 -194115132 - L2 LINE L2 -22 3250 3224 225 378 43 0 chr5 5515038 5515145 -194115005 - MIR SINE MIR -48 160 45 355 294 86 37 chr5 5516499 5516686 -194113464 + MIR SINE MIR 65 260 -2 1806 132 189 35 chr5 5517030 5517401 -194112749 + MSTA LTR MaLR 1 428 0 886 258 30 17 chr5 5517844 5518143 -194112007 - L1M4 LINE L1 -5309 1233 931 1533 175 62 31 chr5 5518982 5519336 -194110814 - MLT1A1 LTR MaLR 0 365 1 5941 116 19 2 chr5 5520372 5521253 -194108897 - THE1A-int LTR MaLR -684 896 1 2155 130 11 26 chr5 5521253 5521600 -194108550 - THE1A LTR MaLR 0 355 14 1343 185 181 0 chr5 5521774 5521881 -194108269 + AluSx SINE Alu 3 89 -213 396 0 0 0 chr5 5521881 5521925 -194108225 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 1343 185 181 0 chr5 5521925 5522071 -194108079 + AluSx SINE Alu 89 302 0 1907 208 75 23 chr5 5522313 5522793 -194107357 - MLT1D LTR MaLR 0 505 1 318 329 106 29 chr5 5522958 5523308 -194106842 - L2 LINE L2 -341 2973 2597 1424 186 0 40 chr5 5523722 5524023 -194106127 + L1MA9 LINE L1 6024 6312 0 265 208 0 0 chr5 5527156 5527209 -194102941 - MIR SINE MIR -32 230 178 347 288 28 79 chr5 5529235 5529450 -194100700 - MIR SINE MIR -56 206 3 203 133 0 0 chr5 5530103 5530133 -194100017 + (GAAAA)n Simple_repeat Simple_repeat 4 33 0 14554 142 26 110 chr5 5580444 5583885 -194046265 + L1PA7 LINE L1 1 3152 -2994 735 107 9 0 chr5 5583918 5584030 -194046120 - L1P LINE L1 -1385 4761 4649 14978 101 3 0 chr5 5584030 5587033 -194043117 + L1PA7 LINE L1 3129 6141 -13 195 42 0 0 chr5 5587037 5587061 -194043089 + (TAA)n Simple_repeat Simple_repeat 2 25 0 180 318 53 53 chr5 5589401 5589533 -194040617 + L2 LINE L2 3159 3290 -23 2217 189 25 7 chr5 5589534 5589978 -194040172 - MER66A LTR ERV1 0 478 27 197 397 13 0 chr5 5591271 5591349 -194038801 - MIR SINE MIR -164 98 20 975 295 54 28 chr5 5591742 5592241 -194037909 + L2 LINE L2 2157 2668 -646 2525 127 6 0 chr5 5592287 5592649 -194037501 - THE1B LTR MaLR 0 364 1 219 402 0 0 chr5 5596136 5596228 -194033922 + MIR SINE MIR 99 190 -72 186 133 0 0 chr5 5597731 5597761 -194032389 + (CA)n Simple_repeat Simple_repeat 2 31 0 1960 184 123 2 chr5 5598670 5599099 -194031051 - L1MC3 LINE L1 -9 7776 7296 1049 257 56 51 chr5 5599105 5599558 -194030592 + MLT1C LTR MaLR 1 457 -10 1405 212 41 132 chr5 5599567 5600255 -194029895 - L1MC3 LINE L1 -486 7299 6675 247 267 56 11 chr5 5600258 5600348 -194029802 + MIR SINE MIR 66 159 -103 202 284 181 8 chr5 5601196 5601323 -194028827 + MIR SINE MIR 103 251 -11 248 295 93 23 chr5 5601470 5601599 -194028551 - MIR SINE MIR -17 245 108 1673 168 31 25 chr5 5602123 5602491 -194027659 + Charlie3 DNA MER1_type 1 2712 0 1631 228 35 68 chr5 5602506 5602577 -194027573 - MLT1C LTR MaLR 0 467 395 540 198 112 9 chr5 5602577 5602693 -194027457 + FLAM_A SINE Alu 5 132 -1 1631 228 35 68 chr5 5602693 5603104 -194027046 - MLT1C LTR MaLR -72 395 1 184 328 0 16 chr5 5604143 5604204 -194025946 - MIR SINE MIR -75 133 74 1468 248 85 25 chr5 5608875 5609310 -194020840 - MLT1F LTR MaLR 0 542 82 2472 64 0 0 chr5 5609825 5610121 -194020029 - AluY SINE Alu -15 296 1 237 196 0 0 chr5 5610709 5610760 -194019390 + (TATATG)n Simple_repeat Simple_repeat 2 52 0 4083 158 20 4 chr5 5611965 5612672 -194017478 + L1PA16 LINE L1 5444 6161 -5 248 180 0 0 chr5 5613420 5613470 -194016680 - L1MA10 LINE L1 -3 6331 6282 1998 142 3 6 chr5 5613488 5613839 -194016311 + AluSq SINE Alu 1 350 0 9497 193 56 20 chr5 5613887 5616517 -194013633 - L1M1 LINE L1 -642 5658 2920 40 37 0 0 chr5 5616571 5616625 -194013525 + AT_rich Low_complexity Low_complexity 1 54 0 653 263 38 19 chr5 5616677 5616943 -194013207 - L1MEc LINE L1 -918 5297 5027 1255 202 27 12 chr5 5616990 5617247 -194012903 - MLT1B LTR MaLR 0 390 130 2099 283 49 33 chr5 5617265 5618272 -194011878 - L1MEc LINE L1 -1802 4413 3391 1388 130 5 0 chr5 5618388 5618588 -194011562 + AluSp SINE Alu 108 308 -5 1639 262 61 44 chr5 5619189 5619360 -194010790 - L1MEc LINE L1 -3666 2549 2382 2056 100 60 0 chr5 5619360 5619641 -194010509 + AluSq SINE Alu 1 298 -15 1639 262 61 44 chr5 5619641 5619702 -194010448 - L1MEc LINE L1 -3833 2382 2324 453 146 9 36 chr5 5619702 5619812 -194010338 - L1MA9 LINE L1 -4 6308 6202 1639 262 61 44 chr5 5619812 5620478 -194009672 - L1MEc LINE L1 -3891 2324 1670 840 105 0 0 chr5 5620530 5620644 -194009506 - THE1A LTR MaLR -241 114 1 2479 85 9 0 chr5 5620685 5621013 -194009137 - THE1A LTR MaLR -24 331 1 11241 100 12 2 chr5 5621013 5622097 -194008053 - THE1A-int LTR MaLR 0 1580 474 225 0 0 0 chr5 5622097 5622122 -194008028 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 11241 100 12 2 chr5 5622122 5622601 -194007549 - THE1A-int LTR MaLR -1106 474 1 2586 99 8 0 chr5 5622601 5622953 -194007197 - THE1A LTR MaLR 0 355 1 697 280 45 48 chr5 5623007 5623590 -194006560 - L1MEc LINE L1 -4816 1580 1000 1168 237 20 4 chr5 5623619 5624060 -194006090 - L1MC3 LINE L1 -47 8156 7623 568 207 67 0 chr5 5624090 5624240 -194005910 - L1MC3 LINE L1 -681 7522 7363 282 106 21 0 chr5 5624243 5624290 -194005860 + L1MA9 LINE L1 6264 6311 -1 263 143 0 100 chr5 5624313 5624383 -194005767 - L1MC3 LINE L1 -846 7357 7295 198 71 0 0 chr5 5624389 5624417 -194005733 + (TG)n Simple_repeat Simple_repeat 2 29 0 1461 221 98 51 chr5 5624428 5624895 -194005255 + MLT1D LTR MaLR 17 505 0 5452 227 65 16 chr5 5624896 5625299 -194004851 - L1MC3 LINE L1 -743 5821 5439 282 116 0 0 chr5 5625299 5625342 -194004808 + (TG)n Simple_repeat Simple_repeat 2 44 0 5452 227 65 16 chr5 5625342 5626220 -194003930 - L1MC3 LINE L1 -1125 5439 5829 201 74 0 0 chr5 5626220 5626247 -194003903 + (TTTTG)n Simple_repeat Simple_repeat 3 29 0 5452 227 65 16 chr5 5626247 5626885 -194003265 - L1MC3 LINE L1 -734 5830 5225 275 130 65 11 chr5 5626887 5626979 -194003171 + (TA)n Simple_repeat Simple_repeat 2 98 0 198 50 75 0 chr5 5627012 5627052 -194003098 + (TA)n Simple_repeat Simple_repeat 1 43 0 872 299 63 0 chr5 5627052 5627416 -194002734 - L1MC3 LINE L1 -2032 4532 4146 2174 279 63 21 chr5 5627429 5628594 -194001556 - L1MC3 LINE L1 -2619 3945 2732 1368 286 65 19 chr5 5628839 5629826 -194000324 - L1M4 LINE L1 -2801 3345 2314 939 259 128 34 chr5 5629912 5630294 -193999856 - L1MC3 LINE L1 -5616 429 12 792 281 79 76 chr5 5630321 5630902 -193999248 - L1MEc LINE L1 -5454 942 360 717 268 80 23 chr5 5630940 5631294 -193998856 - MER57A LTR ERV1 -14 411 69 986 339 37 55 chr5 5631343 5632008 -193998142 - MER57A-int LTR ERV1 -386 7151 6505 2137 112 3 7 chr5 5632008 5632304 -193997846 - AluSg SINE Alu -15 295 1 986 339 37 55 chr5 5632304 5632574 -193997576 - MER57A-int LTR ERV1 -1032 6505 6232 1053 236 14 82 chr5 5633046 5633450 -193996700 - MER57A-int LTR ERV1 -1357 6180 5830 390 196 33 22 chr5 5634108 5634200 -193995950 - Alu SINE Alu -7 293 201 1077 192 30 44 chr5 5634200 5634508 -193995642 - MER57A-int LTR ERV1 -1587 4744 4643 404 266 37 27 chr5 5634583 5634771 -193995379 - MER57A-int LTR ERV1 -2290 2646 2457 * 602 208 26 106 chr5 5634743 5634839 -193995311 - MER57A-int LTR ERV1 -2550 2573 2471 378 0 0 0 chr5 5634839 5634881 -193995269 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 1853 168 0 0 chr5 5634885 5635159 -193994991 - AluSx SINE Alu -28 284 11 602 208 26 106 chr5 5635159 5635321 -193994829 - MER57A-int LTR ERV1 -2655 2468 2331 234 0 0 0 chr5 5635479 5635505 -193994645 + (TA)n Simple_repeat Simple_repeat 2 27 0 4474 41 3 3 chr5 5635641 5636183 -193993967 + L1PA4 LINE L1 3098 3642 -2504 6504 31 4 0 chr5 5636183 5636949 -193993201 + L1PA4 LINE L1 5383 6155 0 4474 41 3 3 chr5 5636949 5636973 -193993177 + L1PA4 LINE L1 3641 3664 -2482 893 224 110 24 chr5 5637003 5637386 -193992764 - MER57A-int LTR ERV1 -3481 1455 1040 378 258 45 15 chr5 5637442 5637574 -193992576 - MER57A-int LTR ERV1 -4510 426 291 850 246 97 8 chr5 5638437 5638685 -193991465 - MER57A LTR ERV1 -2 401 132 524 300 22 11 chr5 5638813 5638993 -193991157 - L1MEc LINE L1 -6055 341 160 414 0 0 0 chr5 5638993 5639039 -193991111 + (TG)n Simple_repeat Simple_repeat 1 46 0 1889 141 14 4 chr5 5639039 5639316 -193990834 - AluSq SINE Alu -33 280 1 1266 168 39 0 chr5 5639319 5639551 -193990599 - L1MB3 LINE L1 -279 5904 5664 196 214 0 24 chr5 5639571 5639613 -193990537 - MER5A DNA MER1_type -1 188 148 1033 154 0 6 chr5 5639613 5639788 -193990362 + L1P LINE L1 4586 4759 -1387 536 217 70 0 chr5 5639787 5639916 -193990234 - L1MEc LINE L1 -6223 173 36 * 1147 230 34 73 chr5 5640573 5640956 -193989194 + MLT1A2 LTR MaLR 1 368 -6 2484 129 6 3 chr5 5642705 5643068 -193987082 + THE1B LTR MaLR 1 364 0 7608 27 0 1 chr5 5643515 5644620 -193985530 + L1PA3 LINE L1 5073 6152 -3 390 271 100 29 chr5 5644642 5644812 -193985338 - L1ME1 LINE L1 -74 6092 5911 261 83 0 0 chr5 5644819 5644855 -193985295 + (A)n Simple_repeat Simple_repeat 1 36 0 498 212 10 0 chr5 5645661 5645760 -193984390 + MER94 DNA DNA 2 101 -33 2780 13 0 0 chr5 5647344 5647647 -193982503 - AluYa5 SINE Alu -8 303 1 23 0 0 0 chr5 5647862 5647885 -193982265 + AT_rich Low_complexity Low_complexity 1 23 0 1992 131 0 42 chr5 5650814 5650867 -193979283 - L1P4 LINE L1 -437 5731 5677 2457 65 7 10 chr5 5650867 5651176 -193978974 - AluY SINE Alu 0 311 4 1992 131 0 42 chr5 5651176 5651458 -193978692 - L1P4 LINE L1 -491 5677 5410 * 2305 127 50 21 chr5 5651455 5651664 -193978486 + L1PA13 LINE L1 5725 5927 -236 2366 75 0 3 chr5 5651664 5651956 -193978194 + AluY SINE Alu 12 302 -9 2305 127 50 21 chr5 5651956 5652170 -193977980 + L1PA13 LINE L1 5927 6160 -3 23 33 0 0 chr5 5652763 5652793 -193977357 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr5 5653660 5653681 -193976469 + AT_rich Low_complexity Low_complexity 1 21 0 1106 171 0 0 chr5 5654895 5655076 -193975074 - AluJb SINE Alu -3 309 129 6391 96 0 0 chr5 5655076 5656033 -193974117 - L1PA10 LINE L1 -9 6159 5200 251 277 30 0 chr5 5656338 5656439 -193973711 + ERVL LTR ERVL 3162 3265 -1731 1877 159 26 34 chr5 5656623 5657001 -193973149 - THE1C LTR MaLR 0 375 1 2108 145 34 8 chr5 5657130 5657481 -193972669 - THE1C LTR MaLR -15 360 1 783 337 52 30 chr5 5657538 5658096 -193972054 + ERVL LTR ERVL 4032 4640 -1053 1071 282 63 11 chr5 5658395 5659149 -193971001 + L1MC2 LINE L1 1230 2217 -4390 4093 49 8 0 chr5 5659154 5659668 -193970482 + L1PA5 LINE L1 5636 6153 -1 253 190 0 0 chr5 5659865 5659923 -193970227 + L1MC2 LINE L1 3135 3192 -3234 3026 147 18 110 chr5 5659942 5660686 -193969464 + L1MA7 LINE L1 5595 6269 -22 5374 238 61 51 chr5 5660696 5664080 -193966070 + L1MC2 LINE L1 3195 6612 -12 368 298 81 44 chr5 5664396 5664999 -193965151 + L1MEd LINE L1 708 1383 -4927 2332 66 0 3 chr5 5664999 5665286 -193964864 + AluY SINE Alu 21 306 -5 368 298 81 44 chr5 5665286 5665536 -193964614 + L1MEd LINE L1 1383 1622 -4688 754 285 64 13 chr5 5665545 5665938 -193964212 + L1M4 LINE L1 4178 4590 -1556 526 248 47 97 chr5 5666102 5666146 -193964004 - L1MC/D LINE L1 -461 5723 5678 2167 116 3 0 chr5 5666146 5666449 -193963701 + AluSx SINE Alu 3 306 -6 526 248 47 97 chr5 5666449 5666638 -193963512 - L1MC/D LINE L1 -506 5678 5508 236 269 2 30 chr5 5666665 5666771 -193963379 - L1MC/D LINE L1 -701 5420 5318 * 254 252 86 7 chr5 5666766 5666905 -193963245 - L1MC/D LINE L1 -1631 4515 4366 440 327 101 19 chr5 5667308 5667904 -193962246 - L1M4 LINE L1 -1309 4837 4193 434 288 70 77 chr5 5668806 5669224 -193960926 + MLT1J LTR MaLR 6 501 -10 292 324 89 11 chr5 5669334 5669513 -193960637 - HAL1b LINE L1 -909 439 247 1442 184 7 47 chr5 5670757 5671056 -193959094 - AluJb SINE Alu -25 287 1 974 217 46 11 chr5 5671141 5671422 -193958728 - MER45R DNA AcHobo 0 1581 1291 712 256 103 38 chr5 5671421 5671819 -193958331 - MER45B DNA AcHobo -616 424 3 * 215 226 170 0 chr5 5672192 5672245 -193957905 - L2 LINE L2 -25 3247 3186 1135 36 0 0 chr5 5672497 5672634 -193957516 + L1PA5 LINE L1 6018 6154 0 430 374 40 34 chr5 5672991 5673312 -193956838 - L2 LINE L2 -667 2647 2325 2075 137 42 28 chr5 5673588 5673947 -193956203 + THE1B LTR MaLR 1 364 0 186 375 0 0 chr5 5674304 5674368 -193955782 + L2 LINE L2 2911 2974 -298 328 298 89 0 chr5 5674907 5675031 -193955119 + L2 LINE L2 3179 3313 0 227 203 17 0 chr5 5675325 5675384 -193954766 + GA-rich Low_complexity Low_complexity 1 60 0 2270 60 0 0 chr5 5678187 5678468 -193951682 + L1PA7 LINE L1 5866 6146 -8 192 152 0 0 chr5 5678899 5678932 -193951218 + CT-rich Low_complexity Low_complexity 3 35 0 357 134 12 24 chr5 5678978 5679060 -193951090 + (TCTA)n Simple_repeat Simple_repeat 4 84 0 27 0 0 0 chr5 5679741 5679768 -193950382 + AT_rich Low_complexity Low_complexity 1 27 0 532 286 93 35 chr5 5680199 5680793 -193949357 - L1MEc LINE L1 -4730 1666 1039 23 33 0 0 chr5 5680810 5680840 -193949310 + AT_rich Low_complexity Low_complexity 1 30 0 284 367 36 22 chr5 5681476 5681754 -193948396 - L1MEc LINE L1 -6081 315 34 26 50 0 0 chr5 5681985 5682025 -193948125 + AT_rich Low_complexity Low_complexity 1 40 0 32 86 0 0 chr5 5682366 5682447 -193947703 + AT_rich Low_complexity Low_complexity 1 81 0 582 114 0 0 chr5 5683600 5683688 -193946462 + (TA)n Simple_repeat Simple_repeat 1 88 0 6566 85 0 4 chr5 5683691 5684670 -193945480 - L1PA8 LINE L1 -17 6155 5179 4146 109 10 0 chr5 5684673 5685290 -193944860 + L1P LINE L1 3195 3817 -2329 2227 226 107 16 chr5 5685337 5686324 -193943826 - L1MC/D LINE L1 -743 5403 4362 1678 189 123 3 chr5 5686371 5686563 -193943587 + MSTA LTR MaLR 1 169 -259 309 26 0 0 chr5 5686563 5686601 -193943549 + (TC)n Simple_repeat Simple_repeat 2 39 0 1678 189 123 3 chr5 5686601 5686790 -193943360 + MSTA LTR MaLR 169 428 0 4179 118 53 16 chr5 5687161 5687856 -193942294 - L1PA13 LINE L1 0 6163 5443 247 323 39 23 chr5 5689067 5689197 -193940953 + L2 LINE L2 3141 3272 0 23 0 0 0 chr5 5689556 5689579 -193940571 + AT_rich Low_complexity Low_complexity 1 23 0 265 314 88 10 chr5 5689951 5690053 -193940097 - L2 LINE L2 -332 2981 2872 2319 223 25 28 chr5 5692090 5693009 -193937141 - L1MB8 LINE L1 0 6989 5902 2398 75 0 0 chr5 5693009 5693302 -193936848 - AluY SINE Alu -18 293 1 2319 223 25 28 chr5 5693302 5693516 -193936634 - L1MB8 LINE L1 -1087 5902 5689 1077 264 30 15 chr5 5693511 5693905 -193936245 - L1MB8 LINE L1 -1683 5274 4875 * 4040 212 37 25 chr5 5693909 5695459 -193934691 + L1MB3 LINE L1 4597 6171 -12 2141 264 75 48 chr5 5695483 5695990 -193934160 - L1MB8 LINE L1 -2074 4883 4391 576 106 0 141 chr5 5695990 5696132 -193934018 - L1MA8 LINE L1 -1 6290 6169 264 59 0 0 chr5 5696138 5696172 -193933978 + (TG)n Simple_repeat Simple_repeat 1 34 0 2141 264 75 48 chr5 5696172 5696950 -193933200 - L1MB8 LINE L1 -2570 4387 3556 829 259 48 48 chr5 5696958 5697267 -193932883 + MLT1C LTR MaLR 156 464 -3 2325 249 41 44 chr5 5697305 5698657 -193931493 - L1MB8 LINE L1 -4701 2258 914 21 0 0 0 chr5 5699751 5699772 -193930378 + AT_rich Low_complexity Low_complexity 1 21 0 349 324 55 14 chr5 5702262 5702407 -193927743 - MIR SINE MIR -109 153 3 234 191 0 0 chr5 5702419 5702466 -193927684 + CT-rich Low_complexity Low_complexity 3 49 0 237 266 0 0 chr5 5702804 5702898 -193927252 + (TG)n Simple_repeat Simple_repeat 2 95 0 391 184 10 10 chr5 5704260 5704358 -193925792 + GA-rich Low_complexity Low_complexity 4 101 0 24 32 0 0 chr5 5706287 5706318 -193923832 + AT_rich Low_complexity Low_complexity 1 31 0 593 304 104 36 chr5 5706622 5707093 -193923057 + MLT1K LTR MaLR 80 582 -6 340 264 47 0 chr5 5708285 5708391 -193921759 - L1ME LINE L1 -468 5653 5543 609 277 104 38 chr5 5708404 5708963 -193921187 - L1ME LINE L1 -813 5333 4885 6114 96 43 61 chr5 5709566 5710740 -193919410 + pTR5 LTR ERV1 741 2029 -409 367 213 11 0 chr5 5710740 5710834 -193919316 + LTR30 LTR ERV1 548 642 -80 1221 112 96 0 chr5 5710835 5711023 -193919127 + LTR12 LTR ERV1 377 582 -132 256 274 126 0 chr5 5711787 5711977 -193918173 + L1MEc LINE L1 2089 2302 -4094 2135 217 84 42 chr5 5712003 5712911 -193917239 + L1MEc LINE L1 2331 3276 -2939 2009 112 0 0 chr5 5712911 5713197 -193916953 - AluSq SINE Alu 0 311 26 790 163 7 14 chr5 5713645 5713786 -193916364 + FLAM_A SINE Alu 1 140 -2 375 243 43 64 chr5 5714601 5714741 -193915409 + MIR SINE MIR 17 153 -109 216 0 0 0 chr5 5714800 5714824 -193915326 + (CA)n Simple_repeat Simple_repeat 1 24 0 221 226 15 73 chr5 5715872 5716009 -193914141 + A-rich Low_complexity Low_complexity 2 130 0 21 0 0 0 chr5 5716538 5716559 -193913591 + AT_rich Low_complexity Low_complexity 1 21 0 1540 271 73 54 chr5 5716854 5717966 -193912184 - Charlie7 DNA MER1_type -168 2444 1312 508 237 16 37 chr5 5718471 5718661 -193911489 - Charlie7 DNA MER1_type -1846 766 581 328 224 152 8 chr5 5718961 5719086 -193911064 - Charlie7 DNA MER1_type -2421 191 49 2147 116 7 7 chr5 5719366 5719669 -193910481 + AluSx SINE Alu 2 304 -8 180 286 202 0 chr5 5721381 5721500 -193908650 - L2 LINE L2 -69 3244 3102 387 145 0 0 chr5 5722017 5722086 -193908064 + (ATG)n Simple_repeat Simple_repeat 2 70 0 1991 161 9 0 chr5 5722367 5722715 -193907435 - L1PA16 LINE L1 -5 6161 5811 2299 189 37 18 chr5 5722865 5723484 -193906666 - L1MA9 LINE L1 -472 5840 5207 4929 224 44 12 chr5 5723486 5723841 -193906309 + L1 LINE L1 3779 4121 -2025 258 32 0 0 chr5 5723841 5723872 -193906278 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 4929 224 44 12 chr5 5723872 5723952 -193906198 + L1 LINE L1 4121 4197 -1949 258 105 0 0 chr5 5723952 5723990 -193906160 + (CA)n Simple_repeat Simple_repeat 1 38 0 4929 224 44 12 chr5 5723990 5724926 -193905224 + L1 LINE L1 4197 5195 -951 227 223 54 31 chr5 5725091 5725221 -193904929 - HAL1b LINE L1 -535 813 681 2668 243 76 57 chr5 5725376 5725683 -193904467 - L1MD2 LINE L1 -13 6346 6046 1775 158 45 24 chr5 5725683 5726013 -193904137 - MER1B DNA MER1_type 0 337 1 2668 243 76 57 chr5 5726013 5726955 -193903195 - L1MD2 LINE L1 -313 6046 5056 844 268 27 27 chr5 5726950 5727249 -193902901 - L1MD2 LINE L1 -1450 4696 4398 * 22 0 0 0 chr5 5728831 5728853 -193901297 + AT_rich Low_complexity Low_complexity 1 22 0 1282 260 100 91 chr5 5732500 5732627 -193897523 - MLT1E2 LTR MaLR -110 516 392 887 205 124 95 chr5 5732627 5733080 -193897070 - MER31B LTR ERV1 0 466 1 1282 260 100 91 chr5 5733080 5733460 -193896690 - MLT1E2 LTR MaLR -234 392 1 9270 239 84 22 chr5 5733493 5733714 -193896436 + L1MC3 LINE L1 2432 2638 -5147 2123 139 10 3 chr5 5733714 5734024 -193896126 - AluSx SINE Alu 0 312 1 9270 239 84 22 chr5 5734024 5738829 -193891321 + L1MC3 LINE L1 2638 7771 -14 2139 104 0 44 chr5 5738948 5739266 -193890884 + AluSx SINE Alu 1 304 -8 277 284 173 12 chr5 5739421 5739583 -193890567 - MIR SINE MIR -21 241 54 293 357 58 0 chr5 5741141 5741295 -193888855 - MIR SINE MIR -72 190 28 200 333 181 7 chr5 5742033 5742171 -193887979 - L2 LINE L2 0 3313 3152 295 294 0 0 chr5 5742665 5742733 -193887417 + polypurine Low_complexity Low_complexity 2 69 0 1386 143 31 5 chr5 5743488 5743711 -193886439 - MER30 DNA MER1_type 0 230 2 2067 127 3 19 chr5 5744722 5745030 -193885120 + AluSq SINE Alu 1 303 -10 429 292 9 0 chr5 5745815 5745928 -193884222 + MER81 DNA DNA 1 114 0 322 111 0 32 chr5 5746755 5746818 -193883332 + (GAAA)n Simple_repeat Simple_repeat 4 64 0 227 274 166 68 chr5 5746820 5747469 -193882681 + HAL1 LINE L1 880 1592 -915 393 203 119 17 chr5 5748024 5748142 -193882008 + L2 LINE L2 3180 3309 -4 341 295 96 76 chr5 5748170 5748641 -193881509 + HAL1 LINE L1 2007 2486 -21 1679 193 3 23 chr5 5748758 5749063 -193881087 - AluJo SINE Alu -13 299 1 2202 119 7 0 chr5 5750598 5750892 -193879258 + AluSx SINE Alu 1 296 -16 697 306 105 35 chr5 5750909 5751568 -193878582 + L1M4 LINE L1 2204 2908 -3238 213 250 0 0 chr5 5751991 5752051 -193878099 + (TA)n Simple_repeat Simple_repeat 2 61 0 228 136 0 0 chr5 5752052 5752096 -193878054 - LTR66 LTR ERVL -172 438 395 3074 165 29 8 chr5 5752135 5752723 -193877427 + L1MC1 LINE L1 5734 6333 0 1507 161 56 21 chr5 5753227 5753513 -193876637 - AluJb SINE Alu -16 296 1 527 250 12 54 chr5 5754036 5754092 -193876058 - MER45A DNA AcHobo -1420 161 104 2539 59 0 13 chr5 5754092 5754397 -193875753 + AluY SINE Alu 1 301 -10 527 250 12 54 chr5 5754397 5754508 -193875642 - MER45A DNA AcHobo -1477 104 1 236 254 0 0 chr5 5758677 5758744 -193871406 - MIR SINE MIR -64 144 78 3949 161 18 60 chr5 5758881 5759700 -193870450 + LTR1 LTR ERV1 1 785 0 261 0 0 0 chr5 5760728 5760757 -193869393 + (CA)n Simple_repeat Simple_repeat 1 29 0 2541 174 47 19 chr5 5761023 5761551 -193868599 + MER67A LTR ERV1 1 543 0 623 183 215 5 chr5 5762439 5762599 -193867551 + LTR28 LTR ERV1 1 139 -286 304 197 14 0 chr5 5762610 5762681 -193867469 + LTR1 LTR ERV1 119 190 -595 * 3075 179 129 16 chr5 5762650 5763287 -193866863 + LTR28 LTR ERV1 308 1016 -4 189 178 22 0 chr5 5763322 5763367 -193866783 - MIR SINE MIR -70 138 93 303 204 0 107 chr5 5764284 5764387 -193865763 + HsTC2 DNA Tc2 5 96 -1802 1266 179 31 0 chr5 5764744 5765001 -193865149 + L1MB3 LINE L1 5919 6183 0 1905 101 12 0 chr5 5765004 5765262 -193864888 + AluSc SINE Alu 36 296 -13 1623 180 11 7 chr5 5765314 5765598 -193864552 + AluJb SINE Alu 1 285 -27 2848 121 27 16 chr5 5766884 5767332 -193862818 + MER4C LTR ERV1 5 457 -8 261 139 0 0 chr5 5767901 5767944 -193862206 + (CATATA)n Simple_repeat Simple_repeat 5 47 0 608 273 6 27 chr5 5768207 5768390 -193861760 - MER5A DNA MER1_type -4 185 7 1413 273 83 53 chr5 5768499 5769104 -193861046 + MER21B LTR ERV1 189 811 -52 269 170 21 85 chr5 5769202 5769296 -193860854 + (CATTG)n Simple_repeat Simple_repeat 1 88 0 619 277 15 29 chr5 5770403 5770598 -193859552 - MER20B DNA MER1_type -17 202 7 331 289 61 24 chr5 5770692 5770960 -193859190 + L1M4 LINE L1 2888 3163 -2983 269 245 60 119 chr5 5770999 5771150 -193859000 + LTR33A LTR ERVL 21 162 -361 310 200 0 15 chr5 5771389 5771454 -193858696 + LTR33A LTR ERVL 442 505 -18 252 235 0 0 chr5 5771453 5771504 -193858646 + LTR33A LTR ERVL 473 523 0 * 32 26 0 0 chr5 5771617 5771656 -193858494 + AT_rich Low_complexity Low_complexity 1 39 0 344 294 52 29 chr5 5771896 5772202 -193857948 + L1M4 LINE L1 3687 3999 -2147 239 293 0 0 chr5 5772210 5772285 -193857865 + (TATATG)n Simple_repeat Simple_repeat 4 78 0 28 29 0 0 chr5 5772341 5772376 -193857774 + AT_rich Low_complexity Low_complexity 1 35 0 673 113 0 10 chr5 5773142 5773239 -193856911 + MER4A LTR ERV1 1 96 -568 2716 107 12 12 chr5 5773240 5773642 -193856508 + MER4A LTR ERV1 263 664 0 2409 51 24 0 chr5 5774599 5774891 -193855259 + AluY SINE Alu 1 299 -12 596 161 0 8 chr5 5774892 5775010 -193855140 - MER5A DNA MER1_type -54 135 19 360 0 0 0 chr5 5776010 5776050 -193854100 + (CA)n Simple_repeat Simple_repeat 1 40 0 2114 207 153 56 chr5 5776504 5777351 -193852799 + LTR1B LTR ERV1 1 826 0 437 220 164 95 chr5 5777619 5777851 -193852299 + MLT2B1 LTR ERVL 265 512 -8 288 318 48 16 chr5 5779510 5779699 -193850451 + L3 LINE CR1 753 947 -630 180 111 0 0 chr5 5780222 5780249 -193849901 + (TGAA)n Simple_repeat Simple_repeat 4 30 0 23 0 0 0 chr5 5783669 5783692 -193846458 + AT_rich Low_complexity Low_complexity 1 23 0 355 131 0 0 chr5 5785002 5785063 -193845087 - L1MA4 LINE L1 -5 6295 6235 198 339 0 0 chr5 5785703 5785768 -193844382 + MIR3 SINE MIR 144 208 0 197 162 0 27 chr5 5787733 5787770 -193842380 - L2 LINE L2 -10 3303 3268 707 227 54 125 chr5 5788190 5788542 -193841608 - MER46C DNA MER2_type -5 333 7 295 317 49 28 chr5 5788636 5788778 -193841372 - MIR3 SINE MIR -28 180 36 276 279 60 117 chr5 5789315 5789648 -193840502 + L2 LINE L2 2958 3271 -1 317 95 0 0 chr5 5790027 5790069 -193840081 + L2 LINE L2 3261 3302 -11 194 293 0 52 chr5 5790326 5790384 -193839766 - L3 LINE CR1 -123 1454 1400 2169 139 0 3 chr5 5791861 5792163 -193837987 - AluSc SINE Alu -8 301 1 4732 112 4 8 chr5 5792707 5793420 -193836730 + L1PA13 LINE L1 5452 6161 -2 2326 97 3 0 chr5 5793850 5794150 -193836000 + AluSx SINE Alu 1 301 -11 973 259 79 36 chr5 5796098 5796708 -193833442 - L1MC5 LINE L1 -36 7925 7290 451 281 6 11 chr5 5796842 5797020 -193833130 - L1MC5 LINE L1 -733 7228 7052 244 211 33 22 chr5 5797086 5797176 -193832974 - L1MC4 LINE L1 -1098 6944 6854 3796 77 10 27 chr5 5797186 5797420 -193832730 - LTR10C LTR ERV1 -37 596 360 2829 13 0 0 chr5 5797420 5797733 -193832417 - AluYb8 SINE Alu -5 313 1 3796 77 10 27 chr5 5797733 5798079 -193832071 - LTR10C LTR ERV1 -273 360 1 282 233 26 86 chr5 5798087 5798203 -193831947 - L1MC5 LINE L1 -1191 6770 6662 23 33 0 0 chr5 5798229 5798259 -193831891 + AT_rich Low_complexity Low_complexity 1 30 0 672 250 75 4 chr5 5798714 5798942 -193831208 - L1MC5 LINE L1 -1866 5942 5699 337 115 0 0 chr5 5798950 5799002 -193831148 - MADE1 DNA Mariner 0 80 29 315 0 0 0 chr5 5799201 5799236 -193830914 + (CA)n Simple_repeat Simple_repeat 2 36 0 214 290 105 9 chr5 5799513 5799745 -193830405 + MIR3 SINE MIR 4 256 -6 2388 111 6 6 chr5 5800208 5800558 -193829592 + THE1B LTR MaLR 3 352 -12 887 201 8 72 chr5 5800567 5800830 -193829320 + MER4A LTR ERV1 1 246 -418 525 253 28 75 chr5 5800855 5801123 -193829027 + MER4C LTR ERV1 208 290 -175 2095 114 3 13 chr5 5801123 5801422 -193828728 - AluSc SINE Alu -13 296 1 525 253 28 75 chr5 5801422 5801591 -193828559 + MER4C LTR ERV1 290 465 0 189 304 89 13 chr5 5801592 5801671 -193828479 + MIR SINE MIR 58 142 -66 2298 88 7 3 chr5 5802153 5802449 -193827701 + AluSg SINE Alu 1 297 -13 26 101 0 0 chr5 5802945 5803034 -193827116 + AT_rich Low_complexity Low_complexity 1 89 0 1813 156 21 15 chr5 5803083 5803411 -193826739 - L1PA16 LINE L1 0 6166 5837 33 73 0 0 chr5 5804157 5804225 -193825925 + AT_rich Low_complexity Low_complexity 1 68 0 410 65 16 0 chr5 5804382 5804444 -193825706 + (TCCA)n Simple_repeat Simple_repeat 2 64 0 214 267 58 33 chr5 5805971 5806091 -193824059 + MIR SINE MIR 118 240 -22 2447 73 3 0 chr5 5806282 5806583 -193823567 + AluY SINE Alu 1 302 -9 1636 191 36 25 chr5 5807248 5807584 -193822566 + L1MA4 LINE L1 5896 6238 -62 3168 201 27 60 chr5 5807584 5808438 -193821712 + LTR1B LTR ERV1 1 826 0 1636 191 36 25 chr5 5808438 5808494 -193821656 + L1MA4 LINE L1 6238 6292 -8 350 237 10 9 chr5 5809216 5809326 -193820824 + L1PB1 LINE L1 4985 5094 -1052 2793 19 27 0 chr5 5809327 5809693 -193820457 - L1P LINE L1 -944 5202 4827 * 3876 11 0 0 chr5 5809671 5810130 -193820020 + L1PA2 LINE L1 5693 6151 -4 3514 113 40 3 chr5 5810142 5810835 -193819315 + L1PB1 LINE L1 5083 5791 -360 308 202 32 75 chr5 5810848 5810942 -193819208 - L1MC4 LINE L1 -1339 6703 6614 190 130 0 43 chr5 5810945 5810991 -193819159 + (CATATA)n Simple_repeat Simple_repeat 6 49 0 2129 140 22 8 chr5 5810997 5811011 -193819139 + L1PB1 LINE L1 5782 5794 -357 194 88 0 29 chr5 5811011 5811045 -193819105 + (TA)n Simple_repeat Simple_repeat 2 34 0 2129 140 22 8 chr5 5811045 5811394 -193818756 + L1PB1 LINE L1 5794 6150 -1 282 216 41 21 chr5 5811520 5811617 -193818533 + (CATATA)n Simple_repeat Simple_repeat 1 99 0 1717 147 38 42 chr5 5812036 5812349 -193817801 + AluSx SINE Alu 1 312 0 260 332 39 19 chr5 5812552 5812760 -193817390 + L1ME3A LINE L1 114 325 -6071 212 128 21 21 chr5 5813181 5813228 -193816922 + (TATAA)n Simple_repeat Simple_repeat 2 48 0 3210 261 75 45 chr5 5813365 5814294 -193815856 + L1ME3A LINE L1 1624 2524 -3691 1806 63 14 5 chr5 5814294 5814550 -193815600 + AluY SINE Alu 60 317 0 3210 261 75 45 chr5 5814550 5816071 -193814079 + L1ME3A LINE L1 2524 4117 -2098 444 278 47 21 chr5 5816116 5816350 -193813800 + L1ME2 LINE L1 5924 6163 -1 5922 215 43 28 chr5 5818592 5819959 -193810191 + L1MC/D LINE L1 3524 4869 -1440 2193 124 0 16 chr5 5819959 5820274 -193809876 + AluSx SINE Alu 2 311 -1 5922 215 43 28 chr5 5820274 5820292 -193809858 + L1MC/D LINE L1 4869 4885 -1424 2771 7 0 0 chr5 5820292 5820595 -193809555 - AluYa5 SINE Alu -8 303 1 5922 215 43 28 chr5 5820595 5821211 -193808939 + L1MC/D LINE L1 4885 5566 -743 420 266 73 78 chr5 5821270 5821627 -193808523 + L1ME3A LINE L1 4999 5353 -862 1031 263 163 48 chr5 5821665 5822419 -193807731 + L1ME3A LINE L1 5391 6231 -8 307 269 74 28 chr5 5822496 5822604 -193807546 - MIR3 SINE MIR -8 200 88 24 0 0 0 chr5 5824347 5824371 -193805779 + AT_rich Low_complexity Low_complexity 1 24 0 485 167 9 26 chr5 5825084 5825198 -193804952 + L1MA10 LINE L1 6223 6334 0 37 39 0 0 chr5 5825345 5825396 -193804754 + AT_rich Low_complexity Low_complexity 1 51 0 420 226 189 6 chr5 5825545 5825709 -193804441 + MLT1J2 LTR MaLR 190 383 -67 332 124 22 45 chr5 5825996 5826085 -193804065 + GA-rich Low_complexity Low_complexity 2 88 0 180 0 0 0 chr5 5826612 5826632 -193803518 + (GA)n Simple_repeat Simple_repeat 1 20 0 407 310 44 44 chr5 5826950 5827108 -193803042 + MER5A DNA MER1_type 30 187 -2 207 340 30 0 chr5 5828045 5828145 -193802005 - MIR SINE MIR -1 261 159 219 279 38 56 chr5 5828732 5828902 -193801248 - MER5B DNA MER1_type -7 182 2 203 333 93 47 chr5 5829190 5829319 -193800831 + L2 LINE L2 3137 3271 -1 528 268 39 15 chr5 5829779 5829942 -193800208 + MIR SINE MIR 3 167 -58 2077 106 0 45 chr5 5830482 5830794 -193799356 - AluSg1 SINE Alu -11 298 1 227 267 0 0 chr5 5832379 5832424 -193797726 + (CTA)n Simple_repeat Simple_repeat 2 46 0 2001 139 10 3 chr5 5832622 5832917 -193797233 - AluJb SINE Alu -15 297 1 225 0 0 0 chr5 5833575 5833600 -193796550 + (CA)n Simple_repeat Simple_repeat 1 25 0 22 35 0 0 chr5 5833717 5833746 -193796404 + AT_rich Low_complexity Low_complexity 1 29 0 1205 197 9 0 chr5 5834540 5834763 -193795387 + AluJb SINE Alu 86 310 -2 2321 216 70 4 chr5 5835449 5835976 -193794174 - MER68 LTR ERV1 0 562 1 248 326 167 8 chr5 5838071 5838203 -193791947 - MIR3 SINE MIR -46 162 10 21 36 0 0 chr5 5840046 5840074 -193790076 + AT_rich Low_complexity Low_complexity 1 28 0 306 0 0 0 chr5 5840403 5840437 -193789713 + (CA)n Simple_repeat Simple_repeat 2 35 0 186 333 63 56 chr5 5841719 5841845 -193788305 - MIR SINE MIR -122 140 14 209 220 0 20 chr5 5842939 5842989 -193787161 + (CA)n Simple_repeat Simple_repeat 2 50 0 221 301 14 14 chr5 5843668 5843741 -193786409 - L2 LINE L2 -1 3271 3199 280 405 7 0 chr5 5845883 5846031 -193784119 - MIR SINE MIR -109 153 5 345 279 78 23 chr5 5847461 5847638 -193782512 + MIR SINE MIR 4 187 -73 7421 164 36 13 chr5 5850628 5851906 -193778244 + L1M1 LINE L1 14 1320 -6245 * 11028 151 29 23 chr5 5851905 5852987 -193777163 + L1M1 LINE L1 2252 3325 -4240 2317 65 0 0 chr5 5852987 5853264 -193776886 + AluY SINE Alu 22 298 -13 11028 151 29 23 chr5 5853264 5855783 -193774367 + L1M1 LINE L1 3325 5887 -1678 2921 129 50 58 chr5 5855763 5856061 -193774089 + L1M1 LINE L1 6453 6752 -972 * 2212 113 7 0 chr5 5856061 5856370 -193773780 + AluSp SINE Alu 1 311 -2 2921 129 50 58 chr5 5856370 5856804 -193773346 + L1M1 LINE L1 6752 7197 -527 233 174 0 29 chr5 5857957 5858026 -193772124 + (TATAA)n Simple_repeat Simple_repeat 1 67 0 342 113 68 0 chr5 5858031 5858164 -193771986 + (TA)n Simple_repeat Simple_repeat 1 142 0 35 0 0 0 chr5 5858164 5858199 -193771951 + AT_rich Low_complexity Low_complexity 1 35 0 297 0 0 0 chr5 5858353 5858386 -193771764 + (TAA)n Simple_repeat Simple_repeat 2 34 0 473 196 0 59 chr5 5858730 5858832 -193771318 - MER3 DNA MER1_type -1 208 113 458 191 159 48 chr5 5858837 5858963 -193771187 - MER3 DNA MER1_type -26 183 44 519 333 7 89 chr5 5859446 5859861 -193770289 - L2 LINE L2 -1 3312 2932 432 82 0 0 chr5 5860436 5860497 -193769653 + (TG)n Simple_repeat Simple_repeat 1 61 0 557 261 84 51 chr5 5861342 5861653 -193768497 + L1MD2 LINE L1 5702 6022 -337 * 1346 234 75 7 chr5 5861382 5861796 -193768354 + L1MB8 LINE L1 5737 6178 0 2161 79 0 0 chr5 5861808 5862075 -193768075 + AluY SINE Alu 44 310 -1 334 64 21 0 chr5 5863375 5863422 -193766728 - THE1C LTR MaLR -322 53 6 442 81 0 27 chr5 5863949 5864023 -193766127 + (TCTCC)n Simple_repeat Simple_repeat 2 73 0 284 304 71 76 chr5 5864339 5864563 -193765587 + MIR SINE MIR 37 259 -3 300 303 97 0 chr5 5867252 5867397 -193762753 - MIR SINE MIR -6 256 98 249 221 0 0 chr5 5868365 5868433 -193761717 + (TCCA)n Simple_repeat Simple_repeat 1 68 0 296 303 28 18 chr5 5868680 5868789 -193761361 - L2 LINE L2 -238 3034 2925 27 29 0 0 chr5 5869480 5869514 -193760636 + AT_rich Low_complexity Low_complexity 1 34 0 386 208 52 10 chr5 5870370 5870466 -193759684 - L2 LINE L2 0 3313 3214 294 304 114 10 chr5 5870517 5870718 -193759432 + LTR50 LTR ERVL 19 240 -555 694 231 231 0 chr5 5871101 5871365 -193758785 + LTR50 LTR ERVL 471 795 0 450 227 82 0 chr5 5871882 5871992 -193758158 + LTR50 LTR ERVL 9 127 -668 292 304 40 40 chr5 5872042 5872167 -193757983 + MIR3 SINE MIR 30 154 -54 193 0 0 0 chr5 5873751 5873775 -193756375 + MIR SINE MIR 129 152 -110 2152 313 23 37 chr5 5873832 5874669 -193755481 + L1M4b LINE L1 11 835 -6024 1845 186 65 35 chr5 5874670 5875007 -193755143 + L1MA9 LINE L1 5833 6158 -154 483 18 0 0 chr5 5875007 5875063 -193755087 + (CA)n Simple_repeat Simple_repeat 1 56 0 1845 186 65 35 chr5 5875063 5875118 -193755032 + L1MA9 LINE L1 6158 6210 -102 222 37 0 0 chr5 5875118 5875145 -193755005 + (TG)n Simple_repeat Simple_repeat 2 28 0 1845 186 65 35 chr5 5875145 5875180 -193754970 + L1MA9 LINE L1 6210 6274 -38 744 226 111 9 chr5 5875191 5875204 -193754946 + L1M4b LINE L1 1546 1556 -5299 2027 135 0 10 chr5 5875204 5875541 -193754609 + AluSg SINE Alu 1 310 0 744 226 111 9 chr5 5875541 5875814 -193754336 + L1M4b LINE L1 1556 1855 -5000 416 185 6 92 chr5 5875855 5875965 -193754185 + L1M4b LINE L1 2087 2205 -4753 2144 169 45 85 chr5 5875965 5876457 -193753693 + MER70A LTR ERVL 1 472 0 416 185 6 92 chr5 5876457 5876481 -193753669 + L1M4b LINE L1 2205 2609 -4349 * 3053 177 80 49 chr5 5876476 5877217 -193752933 + L1MB7 LINE L1 5421 6184 0 1302 245 40 0 chr5 5881182 5881509 -193748641 + MER63B DNA MER1_type 1 340 -96 315 260 173 36 chr5 5882052 5882329 -193747821 + L1ME LINE L1 5522 5836 -285 7409 59 10 0 chr5 5882606 5883656 -193746494 - L1PA7 LINE L1 -3 6151 5096 2205 114 3 18 chr5 5883658 5883990 -193746160 - L1PA7 LINE L1 -1127 5019 4693 324 307 203 63 chr5 5886108 5886473 -193743677 - L1M2 LINE L1 -5908 941 526 323 298 13 25 chr5 5886474 5886632 -193743518 + G-rich Low_complexity Low_complexity 2 157 0 3946 149 99 45 chr5 5887417 5887775 -193742375 - pTR5 LTR ERV1 0 2606 2269 2909 0 0 0 chr5 5887775 5888082 -193742068 + AluYa5 SINE Alu 1 307 -4 3946 149 99 45 chr5 5888082 5889140 -193741010 - pTR5 LTR ERV1 -337 2269 1524 281 276 69 41 chr5 5890211 5890376 -193739774 - Charlie8 DNA MER1_type -2164 253 104 839 198 135 21 chr5 5890546 5890738 -193739412 + MER58A DNA MER1_type 4 217 -7 183 100 0 0 chr5 5890838 5890868 -193739282 + (TAAAAA)n Simple_repeat Simple_repeat 5 34 0 34 72 0 0 chr5 5892138 5892207 -193737943 + AT_rich Low_complexity Low_complexity 1 69 0 991 286 95 24 chr5 5892416 5892923 -193737227 - MLT1H LTR MaLR 0 549 7 512 209 0 0 chr5 5893300 5893405 -193736745 + MLT1B LTR MaLR 31 135 -255 269 292 49 49 chr5 5893924 5894068 -193736082 - MER5B DNA MER1_type -18 160 17 831 158 8 0 chr5 5894928 5895048 -193735102 - FLAM_C SINE Alu -21 122 2 2215 89 4 0 chr5 5895943 5896253 -193733897 + AluSp SINE Alu 1 311 0 622 232 33 7 chr5 5896368 5896519 -193733631 - MER69A DNA AcHobo -1 176 22 252 0 0 0 chr5 5896519 5896547 -193733603 + (TG)n Simple_repeat Simple_repeat 1 28 0 2228 134 132 5 chr5 5897535 5897915 -193732235 - MSTA LTR MaLR 0 428 1 376 285 72 80 chr5 5898208 5898634 -193731516 - L1 LINE L1 -1359 4787 4357 601 221 58 96 chr5 5898684 5898892 -193731258 + MIR SINE MIR 21 220 -42 24 0 0 0 chr5 5898954 5898978 -193731172 + AT_rich Low_complexity Low_complexity 1 24 0 356 326 86 29 chr5 5899062 5899375 -193730775 - L1 LINE L1 -1908 4238 3908 21 36 0 0 chr5 5899651 5899679 -193730471 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr5 5899725 5899753 -193730397 + AT_rich Low_complexity Low_complexity 1 28 0 1755 190 54 2 chr5 5899799 5900223 -193729927 + LTR53 LTR ERVL 1 519 0 810 143 45 184 chr5 5900471 5900694 -193729456 - 7SK RNA RNA -1 192 1 25 31 0 0 chr5 5901002 5901034 -193729116 + AT_rich Low_complexity Low_complexity 1 32 0 1590 210 7 3 chr5 5901139 5901439 -193728711 - AluJo SINE Alu -11 301 1 354 351 71 37 chr5 5902186 5902508 -193727642 - HAL1b LINE L1 -784 564 232 29 0 5 0 chr5 5903120 5903177 -193726973 + AT_rich Low_complexity Low_complexity 1 29 0 461 240 16 32 chr5 5903241 5903366 -193726784 + MIR SINE MIR 118 240 -22 35 63 0 0 chr5 5903385 5903448 -193726702 + AT_rich Low_complexity Low_complexity 1 63 0 253 301 24 0 chr5 5904745 5904828 -193725322 + L2 LINE L2 3227 3311 -2 261 0 0 0 chr5 5905213 5905242 -193724908 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 565 330 48 21 chr5 5905751 5906084 -193724066 + L1M2 LINE L1 11 352 -6497 11114 238 20 34 chr5 5906842 5909468 -193720682 + L1PA12 LINE L1 2231 4961 -2623 1988 134 108 15 chr5 5909468 5909811 -193720339 + THE1C LTR MaLR 1 375 0 11114 238 20 34 chr5 5909811 5910913 -193719237 + L1PA12 LINE L1 4961 6076 -1508 13000 150 18 25 chr5 5910921 5913162 -193716988 + L1P LINE L1 11 2237 -3909 6058 166 4 10 chr5 5913162 5914358 -193715792 + L1MA4 LINE L1 5105 6294 -6 2370 205 8 149 chr5 5915433 5915515 -193714635 - MLT2B3 LTR ERVL 0 515 423 680 92 0 17 chr5 5915515 5915635 -193714515 + (TAGA)n Simple_repeat Simple_repeat 1 118 0 2370 205 8 149 chr5 5915635 5916137 -193714013 - MLT2B3 LTR ERVL -92 423 13 279 203 0 0 chr5 5916664 5916723 -193713427 + (CA)n Simple_repeat Simple_repeat 1 59 0 22 103 0 0 chr5 5917573 5917651 -193712499 + AT_rich Low_complexity Low_complexity 1 78 0 320 308 65 54 chr5 5917740 5918094 -193712056 + L1MEd LINE L1 846 1203 -4916 748 202 75 144 chr5 5918120 5918711 -193711439 - LTR34 LTR ERV1 -4 695 135 464 160 57 19 chr5 5918784 5918890 -193711260 - MER4C LTR ERV1 -353 112 3 1413 192 63 63 chr5 5918948 5919328 -193710822 - MSTD LTR MaLR -2 394 15 218 189 0 0 chr5 5921198 5921235 -193708915 + CT-rich Low_complexity Low_complexity 2 38 0 201 273 105 70 chr5 5921292 5921464 -193708686 + MIR SINE MIR 30 207 -55 2553 222 21 9 chr5 5921872 5922404 -193707746 - MER74A LTR ERVL -18 540 3 384 304 71 30 chr5 5924383 5924551 -193705599 + MIR SINE MIR 68 242 -20 279 79 0 0 chr5 5924564 5924602 -193705548 + (TTTTA)n Simple_repeat Simple_repeat 3 40 0 631 218 15 0 chr5 5925778 5925911 -193704239 + L1MA10 LINE L1 4685 4819 -1327 * 3488 204 7 59 chr5 5925907 5926774 -193703376 + L1MA10 LINE L1 5512 6333 -1 1655 187 126 6 chr5 5927791 5928117 -193702033 + MLT1A1 LTR MaLR 1 365 0 259 160 32 96 chr5 5928649 5928743 -193701407 - Looper DNA T2_type -97 1461 1374 644 175 10 0 chr5 5928791 5928888 -193701262 + MER2 DNA MER2_type 1 98 -247 1011 251 105 19 chr5 5928888 5929203 -193700947 - MER2 DNA MER2_type 0 345 4 652 235 39 59 chr5 5929204 5929323 -193700827 + MER2 DNA MER2_type 95 215 -130 2130 130 0 0 chr5 5929323 5929622 -193700528 - AluSx SINE Alu -13 299 1 652 235 39 59 chr5 5929622 5929757 -193700393 + MER2 DNA MER2_type 215 344 -1 203 315 41 0 chr5 5930008 5930081 -193700069 + MER91C DNA MER1_type 1 76 -64 301 242 48 65 chr5 5930186 5930372 -193699778 - L1MEd LINE L1 -4891 1228 1046 1164 205 43 26 chr5 5930591 5930893 -193699257 - L1MC3 LINE L1 0 7785 7479 2271 114 0 0 chr5 5931148 5931446 -193698704 - AluSx SINE Alu -14 298 1 21 0 0 0 chr5 5931455 5931476 -193698674 + AT_rich Low_complexity Low_complexity 1 21 0 1870 125 39 11 chr5 5931495 5931776 -193698374 - AluSx SINE Alu -13 299 11 2031 157 80 27 chr5 5931926 5932302 -193697848 + MSTD LTR MaLR 1 396 0 22 35 0 0 chr5 5932451 5932480 -193697670 + AT_rich Low_complexity Low_complexity 1 29 0 715 285 191 19 chr5 5932642 5933060 -193697090 + LTR16C LTR ERVL 2 491 0 249 300 77 31 chr5 5933151 5933281 -193696869 - MIR3 SINE MIR -66 142 7 6920 82 6 6 chr5 5934912 5935811 -193694339 + HERVL-A2 LTR ERVL 4756 5654 0 2209 160 36 31 chr5 5935811 5936359 -193693791 + MLT2A2 LTR ERVL 1 554 0 217 191 0 43 chr5 5937014 5937061 -193693089 + GA-rich Low_complexity Low_complexity 4 48 0 225 0 0 0 chr5 5937325 5937350 -193692800 + (TG)n Simple_repeat Simple_repeat 2 26 0 2001 230 91 48 chr5 5937350 5937958 -193692192 - MER21B LTR ERV1 -86 777 144 355 279 23 0 chr5 5938073 5938159 -193691991 - MER21B LTR ERV1 -764 99 12 208 211 58 19 chr5 5938565 5938617 -193691533 + MIR SINE MIR 99 153 -55 1977 181 68 32 chr5 5938647 5939090 -193691060 - LTR2B LTR ERV1 0 490 32 1251 244 54 21 chr5 5939609 5939941 -193690209 - LTR48B LTR ERV1 -4 640 298 4203 169 80 38 chr5 5939942 5940916 -193689234 - LTR48B-int LTR ERV1 -508 5823 4809 375 152 0 15 chr5 5940914 5940980 -193689170 - LTR48B-int LTR ERV1 -4475 1856 1792 * 258 159 23 0 chr5 5941069 5941113 -193689037 - LTR48B-int LTR ERV1 -4699 1632 1588 299 247 11 22 chr5 5941666 5941755 -193688395 - LTR48B-int LTR ERV1 -4954 1377 1290 4766 195 53 86 chr5 5941806 5943138 -193687012 - LTR48B-int LTR ERV1 -5042 1289 1 2668 171 79 53 chr5 5943140 5943229 -193686921 - LTR48B LTR ERV1 0 644 559 2949 84 19 11 chr5 5943229 5943600 -193686550 - THE1C LTR MaLR 0 375 2 2668 171 79 53 chr5 5943600 5943909 -193686241 - LTR48B LTR ERV1 -85 559 222 2433 83 0 3 chr5 5943909 5944221 -193685929 + AluY SINE Alu 1 311 0 2668 171 79 53 chr5 5944221 5944428 -193685722 - LTR48B LTR ERV1 -422 222 22 704 270 89 31 chr5 5944594 5944853 -193685297 + MLT1J LTR MaLR 39 312 -199 201 133 0 0 chr5 5946030 5946060 -193684090 + (GA)n Simple_repeat Simple_repeat 1 30 0 1366 131 66 0 chr5 5946092 5946290 -193683860 - AluJb SINE Alu -16 296 86 26 0 0 0 chr5 5946294 5946320 -193683830 + AT_rich Low_complexity Low_complexity 1 26 0 388 231 92 75 chr5 5946865 5946909 -193683241 - MIR SINE MIR -64 198 156 3342 159 35 0 chr5 5946909 5947444 -193682706 + MER41C LTR ERV1 1 554 0 388 231 92 75 chr5 5947444 5947572 -193682578 - MIR SINE MIR -106 156 23 5354 141 33 20 chr5 5948781 5949663 -193680487 + MER4D LTR ERV1 3 895 -8 606 118 0 0 chr5 5949957 5950050 -193680100 + (TA)n Simple_repeat Simple_repeat 2 94 0 2895 83 103 5 chr5 5950051 5950459 -193679691 + LTR7 LTR ERV1 1 448 -2 208 256 0 0 chr5 5950460 5950503 -193679647 + (CATATA)n Simple_repeat Simple_repeat 4 46 0 329 161 11 75 chr5 5950660 5950753 -193679397 + L1MB4 LINE L1 6093 6179 -1 1040 153 38 169 chr5 5950934 5951206 -193678944 + L1MD3 LINE L1 7547 7759 -236 2214 76 0 0 chr5 5951206 5951481 -193678669 + AluY SINE Alu 26 300 -11 1040 153 38 169 chr5 5951481 5951580 -193678570 + L1MD3 LINE L1 7759 7869 -126 913 227 97 51 chr5 5951599 5952166 -193677984 - LTR48 LTR ERV1 -4 783 1 575 224 2 3 chr5 5952166 5952289 -193677861 + L1MD3 LINE L1 6240 6359 0 250 265 34 6 chr5 5952452 5952539 -193677611 + MIR SINE MIR 58 146 -62 1420 220 26 47 chr5 5952539 5952794 -193677356 - MLT1A2 LTR MaLR 0 374 128 1906 121 220 14 chr5 5952794 5953149 -193677001 - MSTA LTR MaLR 0 428 1 1420 220 26 47 chr5 5953149 5953275 -193676875 - MLT1A2 LTR MaLR -246 128 1 2221 165 49 21 chr5 5954211 5954727 -193675423 + MLT2A2 LTR ERVL 1 554 0 180 125 0 0 chr5 5957762 5957794 -193672356 + (TG)n Simple_repeat Simple_repeat 1 32 0 664 223 13 25 chr5 5957821 5957978 -193672172 - Tigger2 DNA MER2_type -16 2702 2548 * 866 173 46 20 chr5 5957954 5958151 -193671999 - Tigger2 DNA MER2_type -2509 209 8 847 151 50 13 chr5 5958421 5958580 -193671570 - L1MC2 LINE L1 -13 6331 6167 23 0 0 0 chr5 5959878 5959901 -193670249 + AT_rich Low_complexity Low_complexity 1 23 0 384 262 10 0 chr5 5959923 5960026 -193670124 + MER5B DNA MER1_type 1 104 -74 205 79 53 79 chr5 5960116 5960154 -193669996 - MER5A DNA MER1_type -152 37 1 617 201 109 35 chr5 5960175 5960349 -193669801 + MER5A DNA MER1_type 1 187 -2 2099 134 3 0 chr5 5961526 5961833 -193668317 - AluSx SINE Alu -4 308 1 305 196 0 0 chr5 5963357 5963413 -193666737 + L1MC4 LINE L1 6648 6703 -1339 22 0 0 0 chr5 5963852 5963874 -193666276 + AT_rich Low_complexity Low_complexity 1 22 0 1687 41 0 0 chr5 5965155 5965349 -193664801 + L1PA5 LINE L1 5957 6150 -4 28 29 0 0 chr5 5965395 5965430 -193664720 + AT_rich Low_complexity Low_complexity 1 35 0 1695 244 17 3 chr5 5967536 5967896 -193662254 - MLT1A1 LTR MaLR 0 365 1 284 179 30 0 chr5 5968364 5968431 -193661719 + CT-rich Low_complexity Low_complexity 3 71 0 203 346 31 43 chr5 5968814 5968976 -193661174 - L2 LINE L2 -466 2848 2689 407 306 40 30 chr5 5969012 5969211 -193660939 - L1M4 LINE L1 -1104 5042 4842 292 166 5 242 chr5 5969446 5969657 -193660493 + MLT1H LTR MaLR 279 439 -110 1836 237 60 38 chr5 5970282 5970885 -193659265 - L1MC4 LINE L1 -248 7794 7179 589 304 116 42 chr5 5970916 5971374 -193658776 - LTR67 LTR ERVL -5 552 61 197 200 36 0 chr5 5971434 5971489 -193658661 + T-rich Low_complexity Low_complexity 5 61 0 262 291 0 38 chr5 5972966 5973045 -193657105 + CT-rich Low_complexity Low_complexity 2 77 0 440 346 33 22 chr5 5973305 5973522 -193656628 + MIR SINE MIR 3 226 -36 25 51 0 0 chr5 5974842 5974881 -193655269 + AT_rich Low_complexity Low_complexity 1 39 0 2184 108 0 3 chr5 5976303 5976598 -193653552 + AluSx SINE Alu 1 294 -18 1137 210 30 63 chr5 5976691 5976966 -193653184 + MER33 DNA MER1_type 3 267 -2318 2226 80 3 13 chr5 5976966 5977266 -193652884 - AluSp SINE Alu -16 297 1 1137 210 30 63 chr5 5977266 5977323 -193652827 + MER33 DNA MER1_type 267 324 0 186 226 83 60 chr5 5977527 5977611 -193652539 - MIR SINE MIR -140 122 37 194 279 0 0 chr5 5980662 5980705 -193649445 - MIR SINE MIR -109 153 111 189 74 0 0 chr5 5980761 5980788 -193649362 + (AAATG)n Simple_repeat Simple_repeat 4 30 0 201 196 0 0 chr5 5981104 5981150 -193649000 + (TA)n Simple_repeat Simple_repeat 2 47 0 4903 106 10 23 chr5 5981625 5982359 -193647791 + L1PA12 LINE L1 5333 6062 -106 2211 304 140 22 chr5 5983872 5985369 -193644781 + L2 LINE L2 1382 3107 -206 2656 111 3 11 chr5 5985369 5985747 -193644403 + THE1C LTR MaLR 1 375 0 2211 304 140 22 chr5 5985747 5985972 -193644178 + L2 LINE L2 3107 3304 -9 351 200 16 96 chr5 5986033 5986158 -193643992 - MIR SINE MIR -138 124 10 192 314 35 47 chr5 5986177 5986198 -193643952 - L2 LINE L2 -54 3218 3198 1925 193 85 9 chr5 5986198 5986623 -193643527 - MSTB2 LTR MaLR 0 457 1 192 314 35 47 chr5 5986623 5986687 -193643463 - L2 LINE L2 -74 3198 3134 1592 243 49 27 chr5 5986922 5987411 -193642739 - MLT1D LTR MaLR 0 505 6 208 174 0 22 chr5 5987722 5987768 -193642382 + T-rich Low_complexity Low_complexity 3 47 0 2319 57 0 0 chr5 5988488 5988821 -193641329 - AluY SINE Alu 0 333 1 2290 107 0 0 chr5 5988891 5989191 -193640959 - AluY SINE Alu -11 300 1 215 284 210 33 chr5 5989214 5989457 -193640693 - L2 LINE L2 -527 2787 2502 26 93 0 0 chr5 5990126 5990201 -193639949 + AT_rich Low_complexity Low_complexity 1 75 0 1616 179 14 0 chr5 5990632 5990946 -193639204 - AluJb SINE Alu 0 318 1 1108 278 65 15 chr5 5992259 5992662 -193637488 + LTR16A LTR ERVL 25 447 -3 1832 132 30 40 chr5 5993404 5993776 -193636374 - THE1C LTR MaLR 0 375 8 3641 224 7 45 chr5 5994308 5994325 -193635825 - L1P LINE L1 -4290 1856 1840 14056 128 7 6 chr5 5994325 5997420 -193632730 - L1PA8A LINE L1 -6 6440 3345 3641 224 7 45 chr5 5997420 5998474 -193631676 - L1P LINE L1 -4306 1840 826 390 98 0 0 chr5 5998451 5998502 -193631648 - L1PA8A LINE L1 -4774 1101 1051 * 5121 100 16 12 chr5 5998602 5999415 -193630735 - L1PA8A LINE L1 -4801 1074 259 667 194 20 101 chr5 5999650 5999897 -193630253 + LTR12 LTR ERV1 238 464 -250 1535 105 3 88 chr5 5999926 6000211 -193629939 - L1PA8A LINE L1 -5613 262 2 189 215 62 62 chr5 6000968 6001033 -193629117 - MIR SINE MIR -88 174 110 715 215 34 10 chr5 6001359 6001564 -193628586 - MLT1C LTR MaLR -251 216 7 22 35 0 0 chr5 6002517 6002546 -193627604 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 6002996 6003017 -193627133 + AT_rich Low_complexity Low_complexity 1 21 0 2234 102 10 0 chr5 6005808 6006112 -193624038 + AluSp SINE Alu 1 307 -6 273 325 95 31 chr5 6006761 6007118 -193623032 + L3 LINE CR1 832 1211 -366 1436 96 0 40 chr5 6007657 6007856 -193622294 - AluSg SINE Alu -119 191 1 22 0 0 0 chr5 6008337 6008359 -193621791 + AT_rich Low_complexity Low_complexity 1 22 0 288 170 0 0 chr5 6009944 6009997 -193620153 + (TG)n Simple_repeat Simple_repeat 2 54 0 744 226 92 36 chr5 6010324 6010745 -193619405 - MLT1D LTR MaLR -4 501 21 1360 110 24 89 chr5 6011042 6011288 -193618862 - MER30 DNA MER1_type 0 230 1 472 130 0 0 chr5 6011925 6011994 -193618156 + AluSq/x SINE Alu 84 152 -160 229 203 29 14 chr5 6012934 6013003 -193617147 + (TCTA)n Simple_repeat Simple_repeat 1 70 0 565 316 120 43 chr5 6013999 6014669 -193615481 - L2 LINE L2 -30 3283 2567 1257 149 65 84 chr5 6015410 6015826 -193614324 - MSTA LTR MaLR -12 416 9 627 267 90 54 chr5 6015848 6016462 -193613688 + L1MEc LINE L1 827 1462 -4934 307 127 0 0 chr5 6016479 6016534 -193613616 + L1MA3 LINE L1 6250 6304 -1 315 223 19 19 chr5 6016699 6016802 -193613348 + L1M4 LINE L1 4805 4907 -1239 * 4261 208 31 22 chr5 6016795 6017206 -193612944 - L1MA10 LINE L1 -2 6332 5926 2240 139 11 24 chr5 6017206 6017586 -193612564 - THE1C LTR MaLR 0 375 1 9395 126 12 73 chr5 6017586 6019267 -193610883 - THE1C-int LTR MaLR 0 1580 1 2026 174 13 16 chr5 6019272 6019646 -193610504 - THE1C LTR MaLR 0 375 3 4261 208 31 22 chr5 6019646 6021097 -193609053 - L1MA10 LINE L1 -411 5923 4438 1026 243 117 23 chr5 6021100 6021468 -193608682 + MSTD LTR MaLR 1 396 0 1822 196 17 46 chr5 6021475 6022417 -193607733 - L1MA10 LINE L1 -1031 5115 3757 231 26 26 0 chr5 6022415 6022454 -193607696 + L1PA7 LINE L1 5092 5131 -1015 * 5622 64 18 0 chr5 6022554 6023396 -193606754 + L1PA7 LINE L1 5183 6039 -115 1747 171 39 15 chr5 6023399 6023733 -193606417 + THE1B LTR MaLR 23 364 0 10030 106 24 35 chr5 6023734 6024233 -193605917 + THE1B-int LTR MaLR 2 505 -1075 2515 82 17 6 chr5 6024233 6024585 -193605565 + L1PA8A LINE L1 5776 6131 0 10030 106 24 35 chr5 6024585 6025681 -193604469 + THE1B-int LTR MaLR 505 1580 0 1915 144 57 28 chr5 6025681 6026035 -193604115 + THE1B LTR MaLR 1 364 0 417 272 159 46 chr5 6026041 6026324 -193603826 + L1M4 LINE L1 5046 5360 -786 229 218 0 0 chr5 6026326 6026381 -193603769 + L1MB7 LINE L1 2409 2463 -3921 4805 160 48 25 chr5 6026441 6027551 -193602599 + L1MA7 LINE L1 5158 6291 0 1647 225 25 94 chr5 6027560 6027818 -193602332 + L1MB7 LINE L1 4776 5050 -1332 342 80 0 0 chr5 6027818 6027868 -193602282 + (TA)n Simple_repeat Simple_repeat 2 51 0 1647 225 25 94 chr5 6027868 6028332 -193601818 + L1MB7 LINE L1 5050 5448 -934 335 218 92 3 chr5 6028552 6028710 -193601440 + L1MB7 LINE L1 5585 5773 -643 2321 233 5 19 chr5 6028802 6029417 -193600733 + L1MB7 LINE L1 5806 6411 -9 338 0 24 0 chr5 6030227 6030269 -193599881 + (TG)n Simple_repeat Simple_repeat 2 44 0 227 309 37 0 chr5 6030975 6031056 -193599094 + L3 LINE CR1 1492 1575 -2 1268 215 21 38 chr5 6031130 6031470 -193598680 + MER31B LTR ERV1 3 336 -130 245 230 14 14 chr5 6031498 6031572 -193598578 + MER67B LTR ERV1 584 657 -4 971 208 58 5 chr5 6031572 6031725 -193598425 + MER20 DNA MER1_type 2 170 -49 390 74 0 0 chr5 6031725 6031779 -193598371 + (CA)n Simple_repeat Simple_repeat 1 54 0 971 208 58 5 chr5 6031779 6031832 -193598318 + MER20 DNA MER1_type 170 219 0 280 252 106 31 chr5 6032007 6032268 -193597882 - MLT1J1 LTR MaLR -10 436 152 246 283 112 74 chr5 6033272 6033541 -193596609 - MLT1J2 LTR MaLR -65 385 107 984 162 149 4 chr5 6033686 6033921 -193596229 - LTR18B LTR ERVL -87 527 259 1366 106 11 0 chr5 6034140 6034329 -193595821 - LTR18B LTR ERVL -423 191 1 272 292 42 0 chr5 6034329 6034420 -193595730 - MLT1J1 LTR MaLR -343 103 9 986 257 159 0 chr5 6036238 6036495 -193593655 - MER77 LTR ERV1 0 605 308 1071 232 62 77 chr5 6036612 6036948 -193593202 - MER77 LTR ERV1 -253 352 22 234 0 0 0 chr5 6037503 6037529 -193592621 + (TTA)n Simple_repeat Simple_repeat 2 27 0 1782 152 43 0 chr5 6037801 6038077 -193592073 + AluJo SINE Alu 6 293 -19 1091 213 126 60 chr5 6038961 6039000 -193591150 - MLT2B1 LTR ERVL -1 413 378 234 91 0 0 chr5 6039000 6039033 -193591117 + (TG)n Simple_repeat Simple_repeat 1 33 0 1091 213 126 60 chr5 6039033 6039422 -193590728 - MLT2B1 LTR ERVL -36 378 1 224 368 0 40 chr5 6040204 6040329 -193589821 - L2 LINE L2 -13 3300 3181 485 265 139 0 chr5 6041904 6042070 -193588080 - MER5A DNA MER1_type 0 189 1 21 36 0 0 chr5 6042295 6042323 -193587827 + AT_rich Low_complexity Low_complexity 1 28 0 577 301 79 105 chr5 6043545 6044217 -193585933 + L3 LINE CR1 36 685 -892 5328 147 14 3 chr5 6044217 6045433 -193584717 + L1PA15 LINE L1 4933 6161 -4 577 301 79 105 chr5 6045433 6045572 -193584578 + L3 LINE CR1 685 826 -751 2308 156 48 22 chr5 6045635 6046052 -193584098 - MSTA LTR MaLR 0 428 1 240 252 79 47 chr5 6046387 6046514 -193583636 + L3 LINE CR1 1426 1556 -21 405 0 0 0 chr5 6046570 6046615 -193583535 + (CA)n Simple_repeat Simple_repeat 1 45 0 2290 101 0 3 chr5 6048617 6048915 -193581235 - AluSq SINE Alu -16 297 1 434 278 6 17 chr5 6050189 6050369 -193579781 + (TATATG)n Simple_repeat Simple_repeat 3 180 0 212 307 20 7 chr5 6050388 6050538 -193579612 + (TATATG)n Simple_repeat Simple_repeat 3 154 0 433 297 11 0 chr5 6050617 6050792 -193579358 + (TATATG)n Simple_repeat Simple_repeat 3 179 0 346 319 0 0 chr5 6050811 6050977 -193579173 + (TATATG)n Simple_repeat Simple_repeat 4 169 0 210 333 7 20 chr5 6050980 6051130 -193579020 + (CATATA)n Simple_repeat Simple_repeat 3 150 0 272 29 0 0 chr5 6052294 6052329 -193577821 + L1PA6 LINE L1 6111 6145 -9 213 39 0 0 chr5 6052686 6052712 -193577438 + (TG)n Simple_repeat Simple_repeat 2 27 0 508 173 9 27 chr5 6053690 6053800 -193576350 + MER67D LTR ERV1 1 108 -406 339 188 25 12 chr5 6053835 6053915 -193576235 + MER67D LTR ERV1 430 510 -4 2313 154 35 31 chr5 6054343 6054892 -193575258 + MLT2A2 LTR ERVL 1 554 0 225 0 0 0 chr5 6055792 6055817 -193574333 + (TC)n Simple_repeat Simple_repeat 2 26 0 1813 147 6 35 chr5 6056572 6056884 -193573266 + AluJb SINE Alu 1 303 -9 26 30 0 0 chr5 6056949 6056982 -193573168 + AT_rich Low_complexity Low_complexity 1 33 0 2217 110 0 26 chr5 6057274 6057583 -193572567 - AluSq SINE Alu -12 301 1 445 228 33 0 chr5 6058870 6058962 -193571188 - MLT1B LTR MaLR -32 358 264 1246 208 82 38 chr5 6058966 6059332 -193570818 + MLT1B LTR MaLR 6 387 -3 2492 67 0 3 chr5 6060120 6060420 -193569730 + AluY SINE Alu 1 299 -12 183 80 0 0 chr5 6063489 6063514 -193566636 + (A)n Simple_repeat Simple_repeat 1 25 0 240 227 18 118 chr5 6063853 6063963 -193566187 - MIR SINE MIR -7 255 157 800 114 0 64 chr5 6063965 6064105 -193566045 - AluSg/x SINE Alu -1 309 179 180 0 0 0 chr5 6064105 6064125 -193566025 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 227 323 43 0 chr5 6064133 6064226 -193565924 - MIR SINE MIR -110 152 56 297 287 33 47 chr5 6064495 6064645 -193565505 + MIR SINE MIR 91 238 -24 1217 241 177 9 chr5 6066192 6066656 -193563494 + MER74A LTR ERVL 1 542 -16 1519 126 13 4 chr5 6067140 6067378 -193562772 + L1MA2 LINE L1 6065 6304 0 201 39 0 0 chr5 6068332 6068358 -193561792 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2502 76 0 0 chr5 6069236 6069537 -193560613 + AluSc SINE Alu 1 301 -8 2145 126 0 3 chr5 6069857 6070158 -193559992 + AluSx SINE Alu 1 300 -12 744 273 10 10 chr5 6070255 6070464 -193559686 - LTR40a LTR ERVL -303 216 8 1475 178 7 40 chr5 6074057 6074360 -193555790 - L1MA7 LINE L1 -410 5881 5589 1903 180 35 20 chr5 6074360 6074757 -193555393 + L1MA7 LINE L1 5883 6288 -3 745 145 26 0 chr5 6074778 6074895 -193555255 + FRAM SINE Alu 37 156 -20 3168 198 20 37 chr5 6075544 6075789 -193554361 - L1MA9 LINE L1 -35 6277 6030 2335 99 0 0 chr5 6075789 6076082 -193554068 - AluSg1 SINE Alu -16 293 1 3168 198 20 37 chr5 6076082 6076573 -193553577 - L1MA9 LINE L1 -282 6030 5553 2857 195 90 12 chr5 6076569 6076914 -193553236 + L1M2 LINE L1 4589 4906 -1398 * 189 0 0 0 chr5 6076914 6076935 -193553215 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 2857 195 90 12 chr5 6076935 6077506 -193552644 + L1M2 LINE L1 4906 5561 -743 27 0 0 0 chr5 6077608 6077635 -193552515 + AT_rich Low_complexity Low_complexity 1 27 0 280 301 19 0 chr5 6077773 6077876 -193552274 - L1ME3A LINE L1 -227 5943 5839 240 207 81 23 chr5 6078032 6078119 -193552031 + L1MC4 LINE L1 6612 6703 -1339 238 102 0 41 chr5 6078130 6078179 -193551971 + (TA)n Simple_repeat Simple_repeat 1 47 0 776 230 95 24 chr5 6078336 6078705 -193551445 - L1MC5 LINE L1 -225 7736 7342 245 206 24 40 chr5 6078710 6078751 -193551399 + (CATATA)n Simple_repeat Simple_repeat 6 46 -83 2075 148 52 56 chr5 6078751 6079198 -193550952 + MER65A LTR ERV1 1 445 0 245 206 24 40 chr5 6079198 6079282 -193550868 + (CATATA)n Simple_repeat Simple_repeat 46 129 0 1963 193 32 17 chr5 6079499 6079909 -193550241 + MLT2C2 LTR ERVL 1 416 -48 243 164 0 0 chr5 6079925 6079986 -193550164 + (CA)n Simple_repeat Simple_repeat 2 62 0 195 42 0 0 chr5 6080020 6080044 -193550106 + (TA)n Simple_repeat Simple_repeat 2 25 0 273 208 0 62 chr5 6080061 6080157 -193549993 + L1MC4 LINE L1 6614 6703 -1339 180 0 0 0 chr5 6080161 6080181 -193549969 + (GA)n Simple_repeat Simple_repeat 2 21 0 245 139 93 0 chr5 6080199 6080242 -193549908 + MLT2C2 LTR ERVL 472 518 -2 255 299 17 26 chr5 6081421 6081538 -193548612 + MIR SINE MIR 97 212 -50 1147 207 29 0 chr5 6081620 6081828 -193548322 + MER20 DNA MER1_type 6 219 0 8619 48 0 0 chr5 6084044 6085013 -193545137 - LTR5 LTR ERVK 0 969 1 1702 198 91 82 chr5 6085600 6086115 -193544035 - MLT2B1 LTR ERVL 0 520 1 929 245 54 51 chr5 6086649 6086980 -193543170 - MLT1E LTR MaLR -199 394 63 373 66 33 0 chr5 6087654 6087715 -193542435 + (TG)n Simple_repeat Simple_repeat 2 64 0 1713 226 6 43 chr5 6089121 6089535 -193540615 - L1ME1 LINE L1 -168 6067 5672 2178 82 43 0 chr5 6089535 6089814 -193540336 - AluY SINE Alu -5 306 16 1713 226 6 43 chr5 6089814 6089882 -193540268 - L1ME1 LINE L1 -563 5672 5603 1032 274 84 37 chr5 6089890 6090488 -193539662 - L1ME1 LINE L1 -2054 4161 3536 875 150 4 177 chr5 6090761 6091003 -193539147 + MER51C LTR ERV1 446 640 0 421 287 15 7 chr5 6091006 6091142 -193539008 - L1ME1 LINE L1 -2681 3534 3398 3902 185 62 6 chr5 6091146 6091952 -193538198 - L1MB2 LINE L1 -5 6166 5316 3328 262 56 30 chr5 6091944 6094694 -193535456 - L1ME1 LINE L1 -2797 3418 639 * 458 277 196 5 chr5 6094701 6094885 -193535265 + MER20 DNA MER1_type 1 219 0 1402 297 41 17 chr5 6094888 6095477 -193534673 - L1ME1 LINE L1 -5760 636 34 27 62 0 0 chr5 6095749 6095797 -193534353 + AT_rich Low_complexity Low_complexity 1 48 0 597 140 13 33 chr5 6097097 6097247 -193532903 + CT-rich Low_complexity Low_complexity 2 148 0 22 0 0 0 chr5 6097964 6097986 -193532164 + AT_rich Low_complexity Low_complexity 1 22 0 2290 131 41 16 chr5 6098292 6098658 -193531492 + THE1C LTR MaLR 1 375 0 7963 159 40 33 chr5 6098658 6100228 -193529922 + THE1C-int LTR MaLR 1 1580 0 2214 138 42 8 chr5 6100230 6100591 -193529559 + THE1C LTR MaLR 3 375 0 1131 225 14 0 chr5 6100851 6101073 -193529077 + AluJb SINE Alu 5 229 -83 1110 238 47 0 chr5 6102101 6102378 -193527772 - MER58B DNA MER1_type -6 335 46 395 303 117 7 chr5 6104544 6104825 -193525325 + MLT1J2 LTR MaLR 18 329 -121 277 300 0 0 chr5 6105814 6105894 -193524256 + (TG)n Simple_repeat Simple_repeat 2 81 0 1647 110 44 0 chr5 6106816 6107043 -193523107 - AluSg/x SINE Alu -4 306 70 644 211 172 16 chr5 6108656 6108912 -193521238 - MER69 DNA AcHobo -94 2432 2137 995 271 83 95 chr5 6108982 6109432 -193520718 - MER69B DNA AcHobo -1609 917 480 2242 109 0 10 chr5 6109432 6109735 -193520415 - AluSq SINE Alu -13 300 1 995 271 83 95 chr5 6109735 6110140 -193520010 - MER69B DNA AcHobo -2046 480 72 2479 67 0 7 chr5 6110623 6110923 -193519227 - AluY SINE Alu -13 298 1 2225 121 0 13 chr5 6110930 6111245 -193518905 - AluSq SINE Alu -1 312 2 22 0 0 0 chr5 6111421 6111443 -193518707 + AT_rich Low_complexity Low_complexity 1 22 0 223 249 73 0 chr5 6112778 6112870 -193517280 + MER5A DNA MER1_type 63 152 -26 261 0 0 0 chr5 6112942 6112971 -193517179 + (A)n Simple_repeat Simple_repeat 1 29 0 378 245 23 35 chr5 6113826 6113967 -193516183 + MIR SINE MIR 45 184 -63 2212 167 53 17 chr5 6114028 6114412 -193515738 - MSTA LTR MaLR 0 428 27 2955 63 115 5 chr5 6114412 6114771 -193515379 + MLT2A1 LTR ERVL 2 411 -33 905 90 0 8 chr5 6114771 6114905 -193515245 + (TCTA)n Simple_repeat Simple_repeat 3 135 0 2955 63 115 5 chr5 6114905 6114944 -193515206 + MLT2A1 LTR ERVL 411 444 0 2212 167 53 17 chr5 6114944 6114972 -193515178 - MSTA LTR MaLR -401 27 1 37743 93 13 7 chr5 6116248 6122402 -193507748 + L1PA6 LINE L1 11 6154 0 35 24 0 0 chr5 6122644 6122686 -193507464 + AT_rich Low_complexity Low_complexity 1 42 0 312 27 0 0 chr5 6122981 6123018 -193507132 + (TG)n Simple_repeat Simple_repeat 2 38 0 246 193 0 0 chr5 6123655 6123712 -193506438 + (CA)n Simple_repeat Simple_repeat 2 58 0 1520 257 38 16 chr5 6127410 6127861 -193502289 - LTR53 LTR ERVL -7 512 52 547 270 37 18 chr5 6128401 6128564 -193501586 + MIR SINE MIR 60 225 -37 775 267 115 33 chr5 6128605 6129032 -193501118 + MLT1C LTR MaLR 1 462 -5 191 214 0 71 chr5 6129134 6129190 -193500960 - L2 LINE L2 -5 3267 3216 229 189 0 0 chr5 6130144 6130181 -193499969 + MER81 DNA DNA 1 37 -77 238 301 0 0 chr5 6133118 6133191 -193496959 - MIR SINE MIR -129 133 61 2469 146 34 2 chr5 6134194 6134605 -193495545 + MSTA LTR MaLR 1 424 -4 650 242 159 5 chr5 6134853 6135267 -193494883 + MLT1G1 LTR MaLR 30 541 -49 1386 207 34 14 chr5 6135864 6136159 -193493991 + AluJb SINE Alu 1 301 -1 696 276 148 6 chr5 6138656 6138993 -193491157 - L1MC4 LINE L1 -151 7891 7507 2080 140 21 32 chr5 6139098 6139477 -193490673 - THE1C LTR MaLR 0 375 1 1527 196 145 0 chr5 6140958 6141310 -193488840 - MER57A LTR ERV1 0 403 1 320 44 0 0 chr5 6141348 6141393 -193488757 + AluSp/q SINE Alu 255 299 -4 519 219 0 47 chr5 6143292 6143420 -193486730 + MLT1A1 LTR MaLR 1 122 -243 1234 202 34 15 chr5 6143738 6144000 -193486150 + MLT1A1 LTR MaLR 99 365 0 5405 130 13 7 chr5 6144319 6145297 -193484853 - L1PA14 LINE L1 -66 6095 5112 1801 140 184 11 chr5 6145463 6145828 -193484322 + MSTA LTR MaLR 1 428 0 993 114 0 0 chr5 6145850 6145990 -193484160 + MSTA-int LTR MaLR 59 198 -1382 238 269 0 0 chr5 6145990 6146042 -193484108 + (TG)n Simple_repeat Simple_repeat 2 53 0 2488 159 33 28 chr5 6146342 6146801 -193483349 - MLT1C LTR MaLR -1 466 6 326 89 78 0 chr5 6146923 6147013 -193483137 + (TCTA)n Simple_repeat Simple_repeat 2 98 0 2356 106 0 6 chr5 6148294 6148606 -193481544 - AluSp SINE Alu -2 311 2 249 287 53 0 chr5 6149280 6149374 -193480776 + MIR SINE MIR 132 230 -32 21 95 0 0 chr5 6150093 6150156 -193479994 + AT_rich Low_complexity Low_complexity 1 63 0 240 291 57 70 chr5 6150170 6150277 -193479873 - L1P LINE L1 -2364 3782 3676 288 0 0 0 chr5 6150277 6150309 -193479841 + (TG)n Simple_repeat Simple_repeat 2 33 0 240 291 57 70 chr5 6150309 6150359 -193479791 - L1P LINE L1 -2470 3676 3627 2116 172 96 50 chr5 6202244 6202537 -193427613 - LTR48B LTR ERV1 -99 545 218 2433 83 0 3 chr5 6202537 6202849 -193427301 + AluY SINE Alu 1 311 0 2116 172 96 50 chr5 6202849 6203056 -193427094 - LTR48B LTR ERV1 -426 218 22 704 270 89 31 chr5 6203222 6203481 -193426669 + MLT1J LTR MaLR 39 312 -199 201 133 0 0 chr5 6204658 6204688 -193425462 + (GA)n Simple_repeat Simple_repeat 1 30 0 1366 131 66 0 chr5 6204720 6204918 -193425232 - AluJb SINE Alu -16 296 86 26 0 0 0 chr5 6204922 6204948 -193425202 + AT_rich Low_complexity Low_complexity 1 26 0 388 231 92 75 chr5 6205493 6205537 -193424613 - MIR SINE MIR -64 198 156 3365 160 34 0 chr5 6205537 6206073 -193424077 + MER41C LTR ERV1 1 554 0 388 231 92 75 chr5 6206073 6206201 -193423949 - MIR SINE MIR -106 156 23 5367 139 33 20 chr5 6207411 6208293 -193421857 + MER4D LTR ERV1 3 895 -8 660 111 0 0 chr5 6208588 6208687 -193421463 + (TA)n Simple_repeat Simple_repeat 2 100 0 2901 83 103 5 chr5 6208688 6209096 -193421054 + LTR7 LTR ERV1 1 448 -2 208 256 0 0 chr5 6209097 6209140 -193421010 + (CATATA)n Simple_repeat Simple_repeat 4 46 0 329 161 11 75 chr5 6209297 6209390 -193420760 + L1MB4 LINE L1 6093 6179 -1 1040 153 38 169 chr5 6209571 6209843 -193420307 + L1MD3 LINE L1 7547 7759 -236 2236 75 0 0 chr5 6209843 6210121 -193420029 + AluY SINE Alu 26 303 -8 1040 153 38 169 chr5 6210121 6210220 -193419930 + L1MD3 LINE L1 7759 7869 -126 913 223 98 53 chr5 6210239 6210806 -193419344 - LTR48 LTR ERV1 -4 783 1 575 224 2 3 chr5 6210806 6210929 -193419221 + L1MD3 LINE L1 6240 6359 0 250 265 34 6 chr5 6211092 6211179 -193418971 + MIR SINE MIR 58 146 -62 1376 214 28 64 chr5 6211179 6211440 -193418710 - MLT1A2 LTR MaLR 0 374 130 1912 120 223 11 chr5 6211440 6211790 -193418360 - MSTA LTR MaLR -4 424 1 1376 214 28 64 chr5 6211790 6211916 -193418234 - MLT1A2 LTR MaLR -244 130 1 2237 167 46 21 chr5 6212852 6213369 -193416781 + MLT2A2 LTR ERVL 1 554 0 180 125 0 0 chr5 6216404 6216436 -193413714 + (TG)n Simple_repeat Simple_repeat 1 32 0 664 223 13 25 chr5 6216463 6216620 -193413530 - Tigger2 DNA MER2_type -16 2702 2548 * 866 173 46 20 chr5 6216596 6216793 -193413357 - Tigger2 DNA MER2_type -2509 209 8 885 150 44 12 chr5 6217063 6217223 -193412927 - L1MC2 LINE L1 -13 6331 6167 23 0 0 0 chr5 6218522 6218545 -193411605 + AT_rich Low_complexity Low_complexity 1 23 0 384 262 10 0 chr5 6218567 6218670 -193411480 + MER5B DNA MER1_type 1 104 -74 205 79 53 79 chr5 6218762 6218800 -193411350 - MER5A DNA MER1_type -152 37 1 602 195 109 35 chr5 6218821 6218995 -193411155 + MER5A DNA MER1_type 1 187 -2 2099 134 3 0 chr5 6220172 6220479 -193409671 - AluSx SINE Alu -4 308 1 305 196 0 0 chr5 6222003 6222059 -193408091 + L1MC4 LINE L1 6648 6703 -1339 22 0 0 0 chr5 6222492 6222514 -193407636 + AT_rich Low_complexity Low_complexity 1 22 0 1687 41 0 0 chr5 6223795 6223989 -193406161 + L1PA5 LINE L1 5957 6150 -4 24 32 0 0 chr5 6224035 6224066 -193406084 + AT_rich Low_complexity Low_complexity 1 31 0 358 235 99 0 chr5 6224306 6224387 -193405763 - MER117 DNA MER1_type -107 90 2 925 181 0 6 chr5 6224609 6224769 -193405381 - AluSg/x SINE Alu -38 272 114 636 174 36 36 chr5 6224880 6225018 -193405132 - AluSg/x SINE Alu -81 229 92 1695 244 17 3 chr5 6226986 6227346 -193402804 - MLT1A1 LTR MaLR 0 365 1 284 179 30 0 chr5 6227816 6227883 -193402267 + CT-rich Low_complexity Low_complexity 3 71 0 203 346 31 43 chr5 6228266 6228428 -193401722 - L2 LINE L2 -466 2848 2689 407 306 40 30 chr5 6228464 6228663 -193401487 - L1M4 LINE L1 -1104 5042 4842 292 166 5 242 chr5 6228898 6229109 -193401041 + MLT1H LTR MaLR 279 439 -110 1836 237 60 38 chr5 6229734 6230337 -193399813 - L1MC4 LINE L1 -248 7794 7179 615 301 116 42 chr5 6230368 6230826 -193399324 - LTR67 LTR ERVL -5 552 61 197 200 36 0 chr5 6230886 6230941 -193399209 + T-rich Low_complexity Low_complexity 5 61 0 262 291 0 38 chr5 6232423 6232502 -193397648 + CT-rich Low_complexity Low_complexity 2 77 0 466 336 33 22 chr5 6232762 6232979 -193397171 + MIR SINE MIR 3 226 -36 25 51 0 0 chr5 6234304 6234343 -193395807 + AT_rich Low_complexity Low_complexity 1 39 0 2199 105 0 3 chr5 6235765 6236060 -193394090 + AluSx SINE Alu 1 294 -18 1137 210 30 63 chr5 6236153 6236428 -193393722 + MER33 DNA MER1_type 3 267 -2318 2344 81 3 0 chr5 6236428 6236723 -193393427 - AluSp SINE Alu -17 296 1 1137 210 30 63 chr5 6236723 6236780 -193393370 + MER33 DNA MER1_type 267 324 0 186 226 83 60 chr5 6236984 6237068 -193393082 - MIR SINE MIR -140 122 37 194 279 0 0 chr5 6240255 6240298 -193389852 - MIR SINE MIR -109 153 111 189 74 0 0 chr5 6240354 6240381 -193389769 + (AAATG)n Simple_repeat Simple_repeat 4 30 0 201 196 0 0 chr5 6240697 6240743 -193389407 + (TA)n Simple_repeat Simple_repeat 2 47 0 5446 112 15 19 chr5 6241218 6242046 -193388104 + L1PA13 LINE L1 5333 6162 -1 263 136 0 0 chr5 6242087 6242131 -193388019 - L1MA9 LINE L1 -35 6277 6234 445 152 15 38 chr5 6242202 6242334 -193387816 + CT-rich Low_complexity Low_complexity 2 130 0 401 206 10 0 chr5 6242437 6242534 -193387616 + CT-rich Low_complexity Low_complexity 3 100 0 358 197 0 0 chr5 6242534 6242600 -193387550 - L1MA8 LINE L1 -130 6161 6096 2232 301 140 23 chr5 6244209 6245706 -193384444 + L2 LINE L2 1382 3107 -206 2799 116 3 11 chr5 6245706 6246084 -193384066 + THE1C LTR MaLR 1 375 0 2232 301 140 23 chr5 6246084 6246309 -193383841 + L2 LINE L2 3107 3304 -9 358 200 16 96 chr5 6246370 6246495 -193383655 - MIR SINE MIR -138 124 10 206 208 73 135 chr5 6246504 6246535 -193383615 - L2 LINE L2 -49 3223 3192 2069 201 87 9 chr5 6246535 6246959 -193383191 - MSTB2 LTR MaLR 0 457 1 206 208 73 135 chr5 6246959 6247023 -193383127 - L2 LINE L2 -80 3192 3134 1752 247 49 27 chr5 6247258 6247747 -193382403 - MLT1D LTR MaLR 0 505 6 208 174 0 22 chr5 6248058 6248104 -193382046 + T-rich Low_complexity Low_complexity 3 47 0 2320 60 0 0 chr5 6248824 6249172 -193380978 - AluY SINE Alu 0 348 1 2278 107 0 0 chr5 6249242 6249541 -193380609 - AluY SINE Alu -12 299 1 208 282 212 33 chr5 6249566 6249807 -193380343 - L2 LINE L2 -529 2785 2502 26 93 0 0 chr5 6250477 6250552 -193379598 + AT_rich Low_complexity Low_complexity 1 75 0 1605 179 14 0 chr5 6250983 6251297 -193378853 - AluJb SINE Alu 0 318 1 276 404 45 0 chr5 6251521 6251744 -193378406 + ERVL LTR ERVL 4467 4699 -1065 1232 278 65 15 chr5 6252662 6253065 -193377085 + LTR16A LTR ERVL 25 447 -3 2046 128 24 40 chr5 6253807 6254181 -193375969 - THE1C LTR MaLR 0 375 8 14238 128 6 4 chr5 6254796 6257689 -193372461 - L1PA8A LINE L1 -6 6440 3544 776 150 13 0 chr5 6257800 6257953 -193372197 - L1PA8A LINE L1 -2962 3499 3345 * 6057 172 13 40 chr5 6257938 6259831 -193370319 - L1PA8A LINE L1 -4290 2171 259 763 198 16 101 chr5 6260065 6260313 -193369837 + LTR12 LTR ERV1 238 464 -250 1615 104 3 97 chr5 6260342 6260630 -193369520 - L1PA8A LINE L1 -5613 262 2 189 215 62 62 chr5 6261387 6261452 -193368698 - MIR SINE MIR -88 174 110 801 215 34 10 chr5 6261778 6261983 -193368167 - MLT1C LTR MaLR -251 216 7 22 35 0 0 chr5 6262898 6262927 -193367223 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 6263377 6263398 -193366752 + AT_rich Low_complexity Low_complexity 1 21 0 2034 147 3 3 chr5 6264564 6264864 -193365286 + AluJb SINE Alu 4 303 -9 2283 95 10 0 chr5 6266633 6266937 -193363213 + AluSp SINE Alu 1 307 -6 307 319 93 30 chr5 6267616 6267886 -193362264 + L3 LINE CR1 863 1149 -428 324 294 81 48 chr5 6268593 6268989 -193361161 + L2 LINE L2 2734 3139 -174 2247 105 0 25 chr5 6269491 6269805 -193360345 - AluSg SINE Alu -4 306 1 22 0 0 0 chr5 6270286 6270308 -193359842 + AT_rich Low_complexity Low_complexity 1 22 0 327 203 0 0 chr5 6271884 6271953 -193358197 + (TATATG)n Simple_repeat Simple_repeat 3 71 0 839 217 94 39 chr5 6272282 6272703 -193357447 - MLT1D LTR MaLR -4 501 21 1472 110 24 89 chr5 6273000 6273246 -193356904 - MER30 DNA MER1_type 0 230 1 1443 140 0 0 chr5 6273875 6274089 -193356061 + AluSg/x SINE Alu 84 297 -15 229 203 29 14 chr5 6274914 6274983 -193355167 + (TCTA)n Simple_repeat Simple_repeat 1 70 0 562 310 125 48 chr5 6275979 6276649 -193353501 - L2 LINE L2 -30 3283 2567 2347 144 68 13 chr5 6277374 6277770 -193352380 - MSTB LTR MaLR 0 426 9 849 262 90 54 chr5 6277792 6278406 -193351744 + L1MEc LINE L1 827 1462 -4934 350 109 0 0 chr5 6278423 6278478 -193351672 + L1MA3 LINE L1 6250 6304 -1 346 226 19 19 chr5 6278640 6278746 -193351404 + L1M4 LINE L1 4802 4907 -1239 * 4685 208 32 23 chr5 6278737 6279152 -193350998 - L1MA10 LINE L1 0 6334 5924 2448 140 11 21 chr5 6279152 6279531 -193350619 - THE1C LTR MaLR 0 375 1 10170 125 12 73 chr5 6279531 6281212 -193348938 - THE1C-int LTR MaLR 0 1580 1 2195 174 13 16 chr5 6281217 6281591 -193348559 - THE1C LTR MaLR 0 375 3 4685 208 32 23 chr5 6281591 6283041 -193347109 - L1MA10 LINE L1 -413 5921 4438 1160 243 117 23 chr5 6283044 6283412 -193346738 + MSTD LTR MaLR 1 396 0 2383 192 17 28 chr5 6283419 6284345 -193345805 - L1PA7 LINE L1 -1031 5115 3757 * 6085 61 16 0 chr5 6284341 6285274 -193344876 + L1PA7 LINE L1 5092 6039 -115 1895 171 39 15 chr5 6285277 6285611 -193344539 + THE1B LTR MaLR 23 364 0 10762 106 24 35 chr5 6285612 6286111 -193344039 + THE1B-int LTR MaLR 2 505 -1075 2734 82 14 6 chr5 6286111 6286464 -193343686 + L1PA8A LINE L1 5776 6131 0 10762 106 24 35 chr5 6286464 6287560 -193342590 + THE1B-int LTR MaLR 505 1580 0 2080 144 57 28 chr5 6287560 6287914 -193342236 + THE1B LTR MaLR 1 364 0 408 272 159 46 chr5 6287920 6288203 -193341947 + L1M4 LINE L1 5046 5360 -786 254 218 0 0 chr5 6288205 6288260 -193341890 + L1MB7 LINE L1 2409 2463 -3921 5287 161 48 25 chr5 6288316 6289430 -193340720 + L1MA7 LINE L1 5153 6291 0 1721 221 28 101 chr5 6289439 6289697 -193340453 + L1MB7 LINE L1 4776 5051 -1331 306 87 0 0 chr5 6289697 6289743 -193340407 + (TA)n Simple_repeat Simple_repeat 2 47 0 1721 221 28 101 chr5 6289743 6290155 -193339995 + L1MB7 LINE L1 5051 5397 -985 3310 243 50 9 chr5 6290270 6291210 -193338940 + L1MB7 LINE L1 5432 6411 -9 428 0 19 0 chr5 6292017 6292069 -193338081 + (TG)n Simple_repeat Simple_repeat 2 54 0 221 309 37 0 chr5 6292775 6292856 -193337294 + L3 LINE CR1 1492 1575 -2 1416 230 69 34 chr5 6292930 6293372 -193336778 + MER31B LTR ERV1 3 657 -4 1047 213 58 5 chr5 6293372 6293525 -193336625 + MER20 DNA MER1_type 2 170 -49 234 62 0 0 chr5 6293525 6293557 -193336593 + (CA)n Simple_repeat Simple_repeat 1 32 0 1047 213 58 5 chr5 6293557 6293610 -193336540 + MER20 DNA MER1_type 170 219 0 358 252 106 31 chr5 6293786 6294047 -193336103 - MLT1J2 LTR MaLR -10 436 152 310 271 115 78 chr5 6295051 6295320 -193334830 - MLT1J2 LTR MaLR -65 385 107 1634 149 112 6 chr5 6295355 6295677 -193334473 - LTR18B LTR ERVL 0 614 259 1381 101 11 0 chr5 6295897 6296086 -193334064 - LTR18B LTR ERVL -423 191 1 270 292 42 0 chr5 6296086 6296177 -193333973 - MLT1J1 LTR MaLR -343 103 9 989 257 159 0 chr5 6297996 6298253 -193331897 - MER77 LTR ERV1 0 605 308 1064 232 62 77 chr5 6298371 6298707 -193331443 - MER77 LTR ERV1 -253 352 22 207 0 0 0 chr5 6299265 6299288 -193330862 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1762 158 36 4 chr5 6299560 6299839 -193330311 + AluJo SINE Alu 6 293 -19 1091 213 126 60 chr5 6300722 6300761 -193329389 - MLT2B1 LTR ERVL -1 413 378 255 61 0 0 chr5 6300761 6300794 -193329356 + (TG)n Simple_repeat Simple_repeat 1 33 0 1091 213 126 60 chr5 6300794 6301183 -193328967 - MLT2B1 LTR ERVL -36 378 1 264 312 8 48 chr5 6301965 6302090 -193328060 - L2 LINE L2 -13 3300 3181 528 265 139 0 chr5 6303665 6303831 -193326319 - MER5A DNA MER1_type 0 189 1 21 36 0 0 chr5 6304056 6304084 -193326066 + AT_rich Low_complexity Low_complexity 1 28 0 765 300 76 103 chr5 6305306 6305978 -193324172 + L3 LINE CR1 36 684 -893 5617 147 14 3 chr5 6305978 6307199 -193322951 + L1PA15 LINE L1 4933 6161 -4 765 300 76 103 chr5 6307199 6307339 -193322811 + L3 LINE CR1 684 826 -751 2408 161 48 22 chr5 6307402 6307819 -193322331 - MSTA LTR MaLR 0 428 1 332 285 46 39 chr5 6308154 6308284 -193321866 + L3 LINE CR1 1426 1556 -21 282 29 0 0 chr5 6308340 6308375 -193321775 + (CA)n Simple_repeat Simple_repeat 1 35 0 434 278 6 17 chr5 6311670 6311850 -193318300 + (TATATG)n Simple_repeat Simple_repeat 3 180 0 210 333 7 20 chr5 6312246 6312396 -193317754 + (CATATA)n Simple_repeat Simple_repeat 3 150 0 275 29 0 0 chr5 6313561 6313596 -193316554 + L1PA6 LINE L1 6111 6145 -9 1983 145 0 23 chr5 6313628 6313932 -193316218 - AluSx SINE Alu -15 297 1 191 310 17 0 chr5 6314171 6314229 -193315921 + L2 LINE L2 3214 3272 0 1491 139 31 5 chr5 6314943 6315166 -193314984 + MER30 DNA MER1_type 2 230 0 180 273 0 0 chr5 6315921 6315987 -193314163 + CT-rich Low_complexity Low_complexity 4 69 0 199 361 48 30 chr5 6316315 6316481 -193313669 - L2 LINE L2 -428 2886 2718 246 326 181 7 chr5 6316483 6316621 -193313529 + L2 LINE L2 3152 3313 0 332 351 89 0 chr5 6317347 6317515 -193312635 + MIR SINE MIR 8 190 -72 208 315 126 16 chr5 6318000 6318127 -193312023 - MIR SINE MIR -59 203 63 339 285 164 15 chr5 6319060 6319234 -193310916 + MIR SINE MIR 45 241 -21 2117 104 0 44 chr5 6319389 6319707 -193310443 - AluSx SINE Alu -8 304 1 9362 238 84 22 chr5 6319826 6324631 -193305519 - L1MC3 LINE L1 -14 7771 2638 2144 139 7 3 chr5 6324631 6324941 -193305209 + AluSx SINE Alu 1 311 -1 9362 238 84 22 chr5 6324941 6325162 -193304988 - L1MC3 LINE L1 -5147 2638 2432 1282 260 100 91 chr5 6325195 6325575 -193304575 + MLT1E2 LTR MaLR 1 392 -234 1009 203 124 95 chr5 6325575 6326028 -193304122 + MER31B LTR ERV1 1 466 0 1282 260 100 91 chr5 6326028 6326155 -193303995 + MLT1E2 LTR MaLR 392 516 -110 213 39 0 0 chr5 6328442 6328468 -193301682 + (TG)n Simple_repeat Simple_repeat 2 27 0 507 173 9 27 chr5 6329445 6329555 -193300595 + MER67D LTR ERV1 1 108 -406 344 188 25 12 chr5 6329590 6329670 -193300480 + MER67D LTR ERV1 430 510 -4 2299 154 35 31 chr5 6330098 6330647 -193299503 + MLT2A2 LTR ERVL 1 554 0 225 0 0 0 chr5 6331551 6331576 -193298574 + (TC)n Simple_repeat Simple_repeat 2 26 0 1784 148 6 35 chr5 6332332 6332643 -193297507 + AluJb SINE Alu 1 302 -10 26 30 0 0 chr5 6332708 6332741 -193297409 + AT_rich Low_complexity Low_complexity 1 33 0 2182 110 0 26 chr5 6333033 6333342 -193296808 - AluSq SINE Alu -12 301 1 445 228 33 0 chr5 6334629 6334721 -193295429 - MLT1B LTR MaLR -32 358 264 1251 208 82 38 chr5 6334725 6335091 -193295059 + MLT1B LTR MaLR 6 387 -3 2479 63 0 3 chr5 6335879 6336178 -193293972 + AluY SINE Alu 1 298 -13 190 337 36 0 chr5 6339438 6339521 -193290629 + MIR SINE MIR 75 160 -102 260 229 18 119 chr5 6339610 6339719 -193290431 - MIR SINE MIR -7 255 158 831 115 0 65 chr5 6339719 6339858 -193290292 - AluSg/x SINE Alu -2 310 181 180 0 0 0 chr5 6339858 6339878 -193290272 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 254 323 43 0 chr5 6339886 6339979 -193290171 - MIR SINE MIR -110 152 56 297 253 20 67 chr5 6340244 6340398 -193289752 + MIR SINE MIR 87 238 -24 1195 244 177 9 chr5 6341990 6342454 -193287696 + MER74A LTR ERVL 1 542 -16 1519 126 13 4 chr5 6342938 6343176 -193286974 + L1MA2 LINE L1 6065 6304 0 201 39 0 0 chr5 6344130 6344156 -193285994 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2507 76 0 0 chr5 6345022 6345324 -193284826 + AluSc SINE Alu 1 302 -7 2145 126 0 3 chr5 6345644 6345945 -193284205 + AluSx SINE Alu 1 300 -12 744 273 10 10 chr5 6346042 6346251 -193283899 - LTR40a LTR ERVL -303 216 8 1475 178 7 40 chr5 6349844 6350147 -193280003 - L1MA7 LINE L1 -410 5881 5589 1903 180 35 20 chr5 6350147 6350544 -193279606 + L1MA7 LINE L1 5883 6288 -3 745 145 26 0 chr5 6350565 6350682 -193279468 + FRAM SINE Alu 37 156 -20 3168 198 20 37 chr5 6351331 6351576 -193278574 - L1MA9 LINE L1 -35 6277 6030 2335 99 0 0 chr5 6351576 6351869 -193278281 - AluSg1 SINE Alu -16 293 1 3168 198 20 37 chr5 6351869 6352360 -193277790 - L1MA9 LINE L1 -282 6030 5553 2857 195 90 12 chr5 6352356 6352701 -193277449 + L1M2 LINE L1 4589 4906 -1398 * 189 0 0 0 chr5 6352701 6352722 -193277428 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 2857 195 90 12 chr5 6352722 6353293 -193276857 + L1M2 LINE L1 4906 5561 -743 27 0 0 0 chr5 6353395 6353422 -193276728 + AT_rich Low_complexity Low_complexity 1 27 0 280 301 19 0 chr5 6353560 6353663 -193276487 - L1ME3A LINE L1 -227 5943 5839 240 207 81 23 chr5 6353819 6353906 -193276244 + L1MC4 LINE L1 6612 6703 -1339 238 102 0 41 chr5 6353917 6353966 -193276184 + (TA)n Simple_repeat Simple_repeat 2 48 0 776 230 95 24 chr5 6354123 6354492 -193275658 - L1MC5 LINE L1 -225 7736 7342 245 206 24 40 chr5 6354497 6354538 -193275612 + (CATATA)n Simple_repeat Simple_repeat 6 46 -83 2075 148 52 56 chr5 6354538 6354985 -193275165 + MER65A LTR ERV1 1 445 0 245 206 24 40 chr5 6354985 6355069 -193275081 + (CATATA)n Simple_repeat Simple_repeat 46 129 0 1945 195 32 17 chr5 6355286 6355696 -193274454 + MLT2C2 LTR ERVL 1 416 -48 243 164 0 0 chr5 6355712 6355773 -193274377 + (CA)n Simple_repeat Simple_repeat 2 62 0 195 42 0 0 chr5 6355807 6355831 -193274319 + (TA)n Simple_repeat Simple_repeat 2 25 0 273 208 0 62 chr5 6355848 6355944 -193274206 + L1MC4 LINE L1 6614 6703 -1339 216 0 0 0 chr5 6355944 6355968 -193274182 + (GA)n Simple_repeat Simple_repeat 2 25 0 245 139 93 0 chr5 6355986 6356029 -193274121 + MLT2C2 LTR ERVL 472 518 -2 255 299 17 26 chr5 6357208 6357325 -193272825 + MIR SINE MIR 97 212 -50 1147 207 29 0 chr5 6357407 6357615 -193272535 + MER20 DNA MER1_type 6 219 0 8619 48 0 0 chr5 6359831 6360800 -193269350 - LTR5 LTR ERVK 0 969 1 1702 198 91 82 chr5 6361387 6361902 -193268248 - MLT2B1 LTR ERVL 0 520 1 369 352 44 57 chr5 6463400 6463784 -193166366 - L2 LINE L2 0 3272 2894 539 217 95 13 chr5 6464130 6464285 -193165865 - L1MD3 LINE L1 0 8040 7881 356 303 192 4 chr5 6464278 6464512 -193165638 - L1MC4 LINE L1 -191 7851 7574 * 418 207 36 45 chr5 6464545 6464590 -193165560 + MER20 DNA MER1_type 31 75 -144 2712 183 74 13 chr5 6464590 6465119 -193165031 - MER68 LTR ERV1 -1 561 1 418 207 36 45 chr5 6465119 6465184 -193164966 + MER20 DNA MER1_type 75 140 -79 1786 179 0 16 chr5 6465754 6466067 -193164083 + AluJo SINE Alu 3 310 -2 181 109 43 0 chr5 6466475 6466521 -193163629 + T-rich Low_complexity Low_complexity 3 50 0 819 254 96 35 chr5 6468991 6469467 -193160683 + MER110A LTR ERV1 1 486 0 1796 196 78 43 chr5 6469661 6470145 -193160005 + MLT1D LTR MaLR 2 502 -3 389 272 0 26 chr5 6470184 6470298 -193159852 + MIR SINE MIR 152 262 0 1818 166 103 70 chr5 6470827 6471273 -193158877 - MLT2C2 LTR ERVL 0 464 4 1768 185 0 3 chr5 6471406 6471714 -193158436 - AluJo SINE Alu -5 307 1 302 273 96 81 chr5 6474083 6474343 -193155807 - ERVL LTR ERVL -5148 616 353 703 153 14 49 chr5 6474663 6474807 -193155343 + L1MA7 LINE L1 5878 6016 -275 1360 126 18 22 chr5 6474807 6475027 -193155123 + L1PB4 LINE L1 5928 6149 -7 1248 178 36 14 chr5 6475027 6475298 -193154852 + L1MA7 LINE L1 6008 6288 -3 2376 97 3 0 chr5 6476162 6476460 -193153690 - AluSp SINE Alu -14 299 1 1015 169 0 0 chr5 6476510 6476658 -193153492 - AluJb SINE Alu -33 279 132 254 291 39 39 chr5 6476860 6476987 -193153163 + L2 LINE L2 3186 3312 -1 554 236 152 90 chr5 6477241 6477576 -193152574 + LTR18A LTR ERVL 1 356 -1 249 318 111 35 chr5 6477620 6477881 -193152269 + MLT1K LTR MaLR 99 379 -209 22 35 0 0 chr5 6478343 6478372 -193151778 + AT_rich Low_complexity Low_complexity 1 29 0 207 0 0 0 chr5 6478415 6478438 -193151712 + (T)n Simple_repeat Simple_repeat 1 23 0 1097 211 126 38 chr5 6478603 6478673 -193151477 + MSTC LTR MaLR 10 72 -356 1936 149 3 31 chr5 6478673 6478995 -193151155 + AluSq SINE Alu 1 313 0 1097 211 126 38 chr5 6478995 6479241 -193150909 + MSTC LTR MaLR 72 354 -74 415 192 47 161 chr5 6479540 6479569 -193150581 - L1MD3 LINE L1 -168 5998 5967 791 194 6 6 chr5 6479569 6479734 -193150416 - L1MA10 LINE L1 0 6334 6170 415 192 47 161 chr5 6479734 6480130 -193150020 - L1MD3 LINE L1 -199 5967 5697 2099 142 3 0 chr5 6480130 6480426 -193149724 - AluSx SINE Alu -15 297 1 415 192 47 161 chr5 6480426 6480519 -193149631 - L1MD3 LINE L1 -469 5697 5595 6832 74 8 4 chr5 6480519 6482434 -193147716 + L1PA8 LINE L1 4310 6163 -9 615 200 100 6 chr5 6482476 6482636 -193147514 + L1ME LINE L1 5406 5580 -586 228 350 77 0 chr5 6482650 6482833 -193147317 + L2 LINE L2 2550 2746 -568 490 245 126 0 chr5 6485095 6485246 -193144904 + MER58C DNA MER1_type 46 215 0 312 127 0 0 chr5 6487229 6487284 -193142866 + (CGGGG)n Simple_repeat Simple_repeat 5 59 0 25 0 0 0 chr5 6487625 6487650 -193142500 + GC_rich Low_complexity Low_complexity 1 25 0 283 331 118 24 chr5 6488567 6488854 -193141296 - L2 LINE L2 -244 3069 2757 671 281 111 32 chr5 6489072 6489622 -193140528 - L2 LINE L2 -4 3309 2702 653 251 127 41 chr5 6489642 6489909 -193140241 + L2 LINE L2 2409 2698 -616 692 226 83 0 chr5 6489914 6490082 -193140068 - MER58B DNA MER1_type 0 341 160 2357 77 3 10 chr5 6490780 6491079 -193139071 + AluSg SINE Alu 1 297 -13 1384 140 26 0 chr5 6491481 6491709 -193138441 - MER50 LTR ERV1 -500 234 1 191 231 96 0 chr5 6491710 6491762 -193138388 + MIR3 SINE MIR 150 206 -2 462 18 0 0 chr5 6493788 6493843 -193136307 + (TG)n Simple_repeat Simple_repeat 2 56 0 1861 124 0 89 chr5 6495193 6495508 -193134642 + AluSx SINE Alu 26 312 0 2650 127 6 3 chr5 6495999 6496362 -193133788 + THE1B LTR MaLR 1 364 0 893 189 39 149 chr5 6497185 6497963 -193132187 + MER4C LTR ERV1 1 465 0 270 0 0 0 chr5 6499376 6499406 -193130744 + (CA)n Simple_repeat Simple_repeat 2 31 0 882 172 60 142 chr5 6500925 6501256 -193128894 + MLT1A1 LTR MaLR 20 323 -42 193 286 0 16 chr5 6501579 6501642 -193128508 + L2 LINE L2 2979 3040 -232 789 238 14 43 chr5 6501806 6502016 -193128134 + MER3 DNA MER1_type 6 209 0 360 321 42 31 chr5 6502418 6502611 -193127539 - L2 LINE L2 -497 2817 2623 2070 191 116 63 chr5 6504507 6505095 -193125055 + MLT1E3 LTR MaLR 1 619 -5 314 232 0 43 chr5 6505533 6505602 -193124548 - MER103 DNA DNA -78 88 23 257 282 64 18 chr5 6506153 6506263 -193123887 + L1M4 LINE L1 4741 4855 -1291 319 239 95 23 chr5 6506547 6506799 -193123351 + L1M1 LINE L1 5192 5479 -701 478 237 8 8 chr5 6507205 6507323 -193122827 + LTR37B LTR ERV1 351 468 0 2511 76 0 3 chr5 6507430 6507734 -193122416 + AluY SINE Alu 1 303 -8 910 237 28 14 chr5 6507800 6508015 -193122135 + MER20 DNA MER1_type 1 218 -1 617 222 6 56 chr5 6509537 6509699 -193120451 - MER20 DNA MER1_type -6 213 60 925 253 177 59 chr5 6510117 6510383 -193119767 + MLT1E LTR MaLR 25 258 -335 2215 117 40 69 chr5 6510383 6510758 -193119392 + THE1B LTR MaLR 1 364 0 925 253 177 59 chr5 6510758 6511000 -193119150 + MLT1E LTR MaLR 258 593 0 1129 262 26 12 chr5 6511150 6511493 -193118657 + MER90 LTR ERV1 29 376 -199 2040 163 46 37 chr5 6511500 6512054 -193118096 - MLT2A2 LTR ERVL 0 554 1 432 266 35 74 chr5 6512055 6512258 -193117892 + MER90 LTR ERV1 420 614 0 236 305 81 29 chr5 6513535 6513709 -193116441 + L1MEd LINE L1 999 1181 -4938 362 248 218 34 chr5 6514241 6514475 -193115675 - HAL1 LINE L1 -196 2311 2035 450 295 8 76 chr5 6514503 6514740 -193115410 - MIR SINE MIR -15 247 27 549 264 80 41 chr5 6515072 6515636 -193114514 - HAL1 LINE L1 -799 1708 1091 2848 193 72 23 chr5 6515640 6516325 -193113825 - L1MB7 LINE L1 -8 6176 5459 909 294 178 12 chr5 6516568 6517140 -193113010 - HAL1 LINE L1 -1727 780 114 775 146 33 33 chr5 6517243 6517394 -193112756 - MLT1C LTR MaLR -316 151 1 514 301 115 27 chr5 6517527 6518042 -193112108 + L1M4 LINE L1 3706 4265 -1881 330 278 124 43 chr5 6518379 6518588 -193111562 - L1MB7 LINE L1 -2267 5541 5316 242 287 101 23 chr5 6518615 6518744 -193111406 + L1ME LINE L1 5619 5757 -413 2198 103 40 0 chr5 6519277 6519577 -193110573 - AluSx SINE Alu 0 312 1 2423 102 30 24 chr5 6521599 6521972 -193108178 - THE1C LTR MaLR 0 375 1 186 138 35 0 chr5 6522853 6522882 -193107268 - L2 LINE L2 -100 3213 3184 303 180 0 0 chr5 6524153 6524203 -193105947 + Alu SINE Alu 1 50 -252 31 44 0 0 chr5 6524242 6524287 -193105863 + AT_rich Low_complexity Low_complexity 1 45 0 1040 150 0 72 chr5 6524346 6524539 -193105611 + AluJb SINE Alu 131 309 -3 221 328 90 25 chr5 6526116 6526238 -193103912 + MIR SINE MIR 23 152 -110 345 296 96 7 chr5 6526955 6527090 -193103060 + MIR SINE MIR 65 211 -51 203 302 47 0 chr5 6527121 6527227 -193102923 + (TATG)n Simple_repeat Simple_repeat 4 114 0 27 51 0 17 chr5 6528997 6529036 -193101114 + AT_rich Low_complexity Low_complexity 1 40 -18 1736 149 73 3 chr5 6529036 6529325 -193100825 - AluSx SINE Alu -3 309 1 27 51 0 17 chr5 6529325 6529344 -193100806 + AT_rich Low_complexity Low_complexity 40 58 0 1951 102 60 11 chr5 6529347 6529630 -193100520 - AluSx SINE Alu -15 297 1 1462 177 85 0 chr5 6529636 6529907 -193100243 - AluJo SINE Alu -18 294 1 1590 162 40 7 chr5 6529917 6530189 -193099961 - AluJb SINE Alu -23 289 9 25 31 0 0 chr5 6531803 6531835 -193098315 + AT_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr5 6532353 6532381 -193097769 + AT_rich Low_complexity Low_complexity 1 28 0 449 208 0 0 chr5 6633333 6633410 -192996740 + AluJb SINE Alu 173 249 -63 1398 156 7 60 chr5 6633446 6633715 -192996435 - AluJo SINE Alu -57 255 1 234 70 0 70 chr5 6633715 6633758 -192996392 + MSTA LTR MaLR 389 428 0 474 303 65 31 chr5 6633758 6634019 -192996131 - MLT1F-int LTR MaLR -770 601 332 810 193 35 18 chr5 6634084 6634255 -192995895 + FRAM SINE Alu 1 171 -5 290 239 146 15 chr5 6634263 6634393 -192995757 - MLT1F-int LTR MaLR -1221 150 4 897 204 86 9 chr5 6634405 6634626 -192995524 - MLT1F LTR MaLR 0 542 305 287 153 0 125 chr5 6634656 6634716 -192995434 - MLT1F LTR MaLR -328 239 188 201 108 0 0 chr5 6634716 6634753 -192995397 + (CA)n Simple_repeat Simple_repeat 2 38 0 287 153 0 125 chr5 6634753 6634764 -192995386 - MLT1F LTR MaLR -379 188 177 2212 107 50 50 chr5 6634829 6634927 -192995223 + THE1B LTR MaLR 1 98 -266 2255 112 0 3 chr5 6634927 6635223 -192994927 - AluSq SINE Alu -18 295 1 2212 107 50 50 chr5 6635223 6635488 -192994662 + THE1B LTR MaLR 97 364 0 375 212 24 0 chr5 6636718 6636803 -192993347 + MIR3 SINE MIR 73 159 -49 200 205 0 0 chr5 6637196 6637235 -192992915 + (CAT)n Simple_repeat Simple_repeat 1 39 0 1893 122 0 11 chr5 6637992 6638254 -192991896 - AluSx SINE Alu -53 259 1 966 258 46 40 chr5 6638310 6638659 -192991491 + L3 LINE CR1 1071 1421 -156 201 244 0 0 chr5 6639454 6639499 -192990651 + (TTCA)n Simple_repeat Simple_repeat 1 45 0 23 68 0 0 chr5 6639522 6639566 -192990584 + AT_rich Low_complexity Low_complexity 1 44 0 23 0 0 0 chr5 6639632 6639655 -192990495 + AT_rich Low_complexity Low_complexity 1 23 0 404 325 41 0 chr5 6641581 6641750 -192988400 + MIR3 SINE MIR 33 208 0 718 112 0 90 chr5 6641779 6641913 -192988237 - AluSx SINE Alu 0 309 188 994 106 0 8 chr5 6641924 6642056 -192988094 - AluSx SINE Alu -176 137 7 1351 190 58 48 chr5 6642135 6642514 -192987636 - MLT1C LTR MaLR 0 467 85 292 304 0 0 chr5 6642859 6642938 -192987212 - MIR SINE MIR -75 187 109 290 281 57 62 chr5 6643059 6643269 -192986881 - MIR SINE MIR -43 219 11 1582 58 43 14 chr5 6644182 6644390 -192985760 - AluSq SINE Alu -21 292 79 216 93 37 19 chr5 6644530 6644584 -192985566 + A-rich Low_complexity Low_complexity 4 58 0 201 339 0 34 chr5 6644612 6644789 -192985361 + A-rich Low_complexity Low_complexity 2 172 0 433 294 17 17 chr5 6644838 6645018 -192985132 + GA-rich Low_complexity Low_complexity 1 180 0 741 78 0 0 chr5 6645320 6645410 -192984740 + THE1C LTR MaLR 1 90 -285 1412 171 89 0 chr5 6645421 6645679 -192984471 + MER50 LTR ERV1 431 711 -23 1737 176 0 31 chr5 6646153 6646471 -192983679 - AluJb SINE Alu -4 308 1 283 293 53 30 chr5 6646572 6646705 -192983445 - MLT1I LTR MaLR -52 357 222 1456 116 61 101 chr5 6646812 6646982 -192983168 - MER39B LTR ERV1 -1 652 500 1717 153 30 0 chr5 6646982 6647250 -192982900 - AluJo SINE Alu -25 287 12 1456 116 61 101 chr5 6647250 6647406 -192982744 - MER39B LTR ERV1 -153 500 339 2599 21 3 52 chr5 6647888 6648215 -192981935 + AluY SINE Alu 1 311 0 340 310 113 18 chr5 6648229 6648458 -192981692 + L1MEd LINE L1 508 758 -5361 489 174 12 0 chr5 6648587 6648673 -192981477 - HY1 scRNA scRNA -25 87 1 1367 181 43 37 chr5 6648733 6649032 -192981118 - AluJb SINE Alu -9 303 3 2354 89 7 3 chr5 6649065 6649368 -192980782 + AluSq SINE Alu 1 304 -9 393 242 82 62 chr5 6649540 6649734 -192980416 + L1MEd LINE L1 2878 3075 -3054 1725 203 15 3 chr5 6649743 6650068 -192980082 - MLT1A1 LTR MaLR -1 364 36 290 279 169 0 chr5 6650089 6650243 -192979907 + L1M4 LINE L1 4664 4843 -1303 675 256 77 25 chr5 6650245 6650530 -192979620 - L2 LINE L2 0 3313 3014 2057 125 0 10 chr5 6650651 6650946 -192979204 + AluSx SINE Alu 12 303 -9 267 284 108 7 chr5 6651022 6651161 -192978989 + MIR SINE MIR 16 164 -63 34 24 0 0 chr5 6651262 6651303 -192978847 + AT_rich Low_complexity Low_complexity 1 41 0 27 29 0 0 chr5 6651825 6651859 -192978291 + AT_rich Low_complexity Low_complexity 1 34 0 2346 102 3 0 chr5 6652241 6652545 -192977605 - AluSc SINE Alu -4 305 1 302 33 7 7 chr5 6652784 6652835 -192977315 - MADE1 DNA Mariner 0 80 47 560 273 39 42 chr5 6652928 6653134 -192977016 - MIR SINE MIR -57 205 1 183 169 68 34 chr5 6653258 6653317 -192976833 - MIR SINE MIR -36 226 166 402 308 28 21 chr5 6654221 6654364 -192975786 - MIR3 SINE MIR -46 162 19 223 217 29 29 chr5 6654969 6655038 -192975112 + T-rich Low_complexity Low_complexity 4 72 0 2064 193 80 42 chr5 6656612 6657088 -192973062 + MER72 LTR ERV1 15 508 -214 1401 152 0 49 chr5 6657132 6657395 -192972755 + AluJo SINE Alu 37 286 -26 1446 157 0 4 chr5 6657416 6657646 -192972504 + MER72 LTR ERV1 494 722 0 708 162 0 0 chr5 6657693 6657792 -192972358 + AluJ/FLAM SINE Alu 2 100 -212 426 190 229 45 chr5 6657807 6657986 -192972164 - LTR37A LTR ERV1 -207 219 8 180 296 0 0 chr5 6658700 6658808 -192971342 + A-rich Low_complexity Low_complexity 1 108 0 2188 100 7 3 chr5 6660648 6660939 -192969211 - AluSx SINE Alu -20 292 1 182 273 18 18 chr5 6661414 6661469 -192968681 + MIR3 SINE MIR 10 64 -144 21 0 0 0 chr5 6661512 6661533 -192968617 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 6663144 6663167 -192966983 + AT_rich Low_complexity Low_complexity 1 23 0 1578 195 10 0 chr5 6664879 6665003 -192965147 + AluJb SINE Alu 3 124 -188 369 0 0 0 chr5 6665003 6665044 -192965106 + (CA)n Simple_repeat Simple_repeat 2 42 0 1578 195 10 0 chr5 6665044 6665211 -192964939 + AluJb SINE Alu 124 297 -15 2097 131 7 0 chr5 6665542 6665839 -192964311 + AluSx SINE Alu 2 300 -12 1918 119 0 48 chr5 6666230 6666541 -192963609 - AluSx SINE Alu -16 296 1 813 159 0 57 chr5 6666569 6666726 -192963424 - AluJo SINE Alu -154 158 11 211 267 0 0 chr5 6667538 6667583 -192962567 - L2 LINE L2 -8 3305 3261 208 234 0 21 chr5 6667659 6667706 -192962444 + CT-rich Low_complexity Low_complexity 3 48 0 666 232 53 2 chr5 6667727 6667885 -192962265 - MIR SINE MIR -44 164 2 411 298 68 12 chr5 6669002 6669163 -192960987 - MIR3 SINE MIR -1 207 38 1293 153 23 23 chr5 6669413 6669629 -192960521 + AluJb SINE Alu 1 216 -96 471 159 127 40 chr5 6669629 6669755 -192960395 + Charlie5 DNA MER1_type 2447 2583 -29 180 301 63 56 chr5 6669769 6669912 -192960238 - L2 LINE L2 -1321 1993 1850 2692 147 26 5 chr5 6671658 6672081 -192958069 + Tigger2a DNA MER2_type 2 433 -1 1996 145 3 20 chr5 6672494 6672797 -192957353 + AluJb SINE Alu 2 299 -13 403 153 0 0 chr5 6673960 6674019 -192956131 - Alu SINE Alu -16 296 238 2906 139 56 20 chr5 6674019 6674572 -192955578 + MER50 LTR ERV1 1 573 -161 2197 104 0 10 chr5 6674572 6674881 -192955269 - AluSx SINE Alu -6 306 1 1746 170 10 35 chr5 6675174 6675486 -192954664 - AluJb SINE Alu -8 304 1 652 154 0 0 chr5 6675918 6676022 -192954128 + AluJb SINE Alu 202 305 -7 631 115 0 21 chr5 6676537 6676633 -192953517 - FLAM_C SINE Alu -6 137 44 858 226 0 6 chr5 6678199 6678363 -192951787 + MER45A DNA AcHobo 1 163 -15 536 169 22 88 chr5 6680394 6680530 -192949620 + L2 LINE L2 2731 2857 -457 1737 93 115 33 chr5 6680533 6680803 -192949347 + LTR9 LTR ERV1 1 292 -320 1644 105 4 13 chr5 6680803 6681032 -192949118 - AluSx SINE Alu -85 227 1 668 188 150 0 chr5 6681032 6681165 -192948985 + MER2 DNA MER2_type 193 345 0 2001 129 3 7 chr5 6681190 6681477 -192948673 - AluSx SINE Alu -26 286 1 199 77 26 26 chr5 6682622 6682661 -192947489 + (GAAA)n Simple_repeat Simple_repeat 2 40 0 22 0 0 0 chr5 6683305 6683327 -192946823 + AT_rich Low_complexity Low_complexity 1 22 0 255 316 40 0 chr5 6684642 6684718 -192945432 - MIR SINE MIR -100 108 30 1462 221 4 0 chr5 6685416 6685692 -192944458 + AluJo SINE Alu 22 298 -14 335 367 190 29 chr5 6686934 6687245 -192942905 + L2 LINE L2 2910 3270 -2 457 314 88 10 chr5 6687422 6687616 -192942534 + MIR SINE MIR 1 209 -53 390 208 94 10 chr5 6687693 6687789 -192942361 - L1MC2 LINE L1 -29 6315 6212 1844 144 39 10 chr5 6687832 6688138 -192942012 - MER2 DNA MER2_type 0 345 31 200 33 0 33 chr5 6691589 6691619 -192938531 + (CA)n Simple_repeat Simple_repeat 1 29 0 216 0 0 0 chr5 6694136 6694160 -192935990 + (A)n Simple_repeat Simple_repeat 1 24 0 2073 93 4 0 chr5 6694827 6695097 -192935053 + L1PA8 LINE L1 5902 6172 0 591 287 79 14 chr5 6697508 6697724 -192932426 - MIR SINE MIR -1 261 32 578 203 8 8 chr5 6698695 6698813 -192931337 + L2 LINE L2 2680 2797 -517 289 210 37 0 chr5 6698849 6698930 -192931220 + (TA)n Simple_repeat Simple_repeat 2 85 0 436 81 0 40 chr5 6698947 6699021 -192931129 + MADE1 DNA Mariner 10 80 0 583 307 58 19 chr5 6699046 6699251 -192930899 + L2 LINE L2 2851 3063 -250 1673 134 0 0 chr5 6699582 6699814 -192930336 - AluSx SINE Alu -80 232 1 2155 116 0 0 chr5 6700355 6700649 -192929501 - AluSx SINE Alu -18 294 1 1684 180 3 10 chr5 6700798 6701093 -192929057 - AluJo SINE Alu -19 293 1 2288 96 0 0 chr5 6701457 6701750 -192928400 + AluSx SINE Alu 1 293 -19 1901 152 13 3 chr5 6702080 6702383 -192927767 + AluJb SINE Alu 1 306 -6 2368 84 0 3 chr5 6702391 6702687 -192927463 + AluSg SINE Alu 3 297 -13 315 313 61 0 chr5 6705459 6705558 -192924592 + L2 LINE L2 3159 3263 -9 1435 198 55 32 chr5 6706905 6707253 -192922897 + MLT1A2 LTR MaLR 1 356 -18 270 194 0 0 chr5 6709865 6709927 -192920223 + (TGAA)n Simple_repeat Simple_repeat 1 62 0 4757 70 20 2 chr5 6709986 6710598 -192919552 + L1PA8A LINE L1 5482 6104 -27 1722 153 10 27 chr5 6710714 6711008 -192919142 + AluJb SINE Alu 1 289 -23 215 40 60 20 chr5 6712125 6712175 -192917975 + (CA)n Simple_repeat Simple_repeat 2 53 0 189 0 0 0 chr5 6713137 6713158 -192916992 + (A)n Simple_repeat Simple_repeat 1 21 0 288 0 0 0 chr5 6713965 6713997 -192916153 + (A)n Simple_repeat Simple_repeat 1 32 0 22 56 0 0 chr5 6716012 6716048 -192914102 + AT_rich Low_complexity Low_complexity 1 36 0 1570 199 14 0 chr5 6716048 6716334 -192913816 - AluJo SINE Alu -22 290 1 2221 146 37 0 chr5 6717241 6717590 -192912560 + MER47A DNA MER2_type 5 366 0 1854 169 3 13 chr5 6717794 6717976 -192912174 - AluJo SINE Alu -1 311 132 2254 105 7 0 chr5 6717976 6718272 -192911878 - AluSg SINE Alu -12 298 1 1854 169 3 13 chr5 6718272 6718403 -192911747 - AluJo SINE Alu -180 132 1 2207 125 0 3 chr5 6718491 6718796 -192911354 - AluJb SINE Alu 0 312 9 243 232 295 11 chr5 6718876 6718971 -192911179 - MIR SINE MIR -55 153 32 1396 112 66 2 chr5 6719967 6720203 -192909947 + L1PB3 LINE L1 5663 5908 -246 182 279 127 0 chr5 6720335 6720414 -192909736 - MIR SINE MIR -130 132 44 2362 108 0 13 chr5 6721322 6721638 -192908512 + AluSx SINE Alu 1 312 0 1127 209 158 73 chr5 6724008 6724515 -192905635 - MLT1F1 LTR MaLR -23 544 1 2226 106 7 3 chr5 6727373 6727674 -192902476 - AluSq SINE Alu -11 302 1 452 314 64 29 chr5 6727745 6727949 -192902201 + Charlie8 DNA MER1_type 4 214 -2203 474 18 0 0 chr5 6729849 6729904 -192900246 + (TA)n Simple_repeat Simple_repeat 1 55 0 2274 89 0 7 chr5 6729904 6730196 -192899954 - AluSq SINE Alu -21 292 3 960 184 128 28 chr5 6730200 6730450 -192899700 + MSTB1 LTR MaLR 156 430 -2 351 141 109 0 chr5 6731232 6731296 -192898854 - MER50 LTR ERV1 -663 71 1 275 238 60 24 chr5 6731889 6731973 -192898177 + MLT1L LTR MaLR 527 613 -2 2944 101 0 5 chr5 6732159 6732536 -192897614 - THE1C LTR MaLR 0 375 1 954 216 96 96 chr5 6733068 6733536 -192896614 - LTR34 LTR ERV1 -4 695 136 425 180 72 18 chr5 6733614 6733725 -192896425 - MER4A LTR ERV1 -547 117 1 353 261 45 9 chr5 6733827 6733938 -192896212 + Charlie5 DNA MER1_type 34 148 -2464 2256 99 10 0 chr5 6733940 6734242 -192895908 + AluSx SINE Alu 1 305 -7 2418 183 56 42 chr5 6734248 6734603 -192895547 + Charlie5 DNA MER1_type 1975 2343 -281 2163 126 10 0 chr5 6734603 6734905 -192895245 - AluSx SINE Alu -7 305 1 2418 183 56 42 chr5 6734905 6735161 -192894989 + Charlie5 DNA MER1_type 2343 2594 -30 223 217 0 0 chr5 6735645 6735691 -192894459 - MIR SINE MIR -115 147 102 4795 161 48 9 chr5 6735695 6736557 -192893593 - MER54A LTR ERVL -6 895 1 729 234 52 16 chr5 6740639 6740831 -192889319 - MER113 DNA MER1_type? -54 467 269 472 220 43 14 chr5 6740887 6741028 -192889122 - MER113 DNA MER1_type? -371 150 6 21 0 0 0 chr5 6742293 6742314 -192887836 + AT_rich Low_complexity Low_complexity 1 21 0 2102 98 3 10 chr5 6742497 6742792 -192887358 + AluSq SINE Alu 2 294 -19 309 51 0 0 chr5 6744123 6744162 -192885988 + (T)n Simple_repeat Simple_repeat 1 39 0 594 217 14 29 chr5 6744162 6744300 -192885850 + MIR SINE MIR 18 153 -109 890 239 71 0 chr5 6748267 6748496 -192881654 - MIR SINE MIR -10 252 8 2103 112 10 0 chr5 6749538 6749842 -192880308 - AluSx SINE Alu -1 311 5 528 168 84 8 chr5 6749944 6750075 -192880075 + LTR37A LTR ERV1 286 426 0 273 302 9 35 chr5 6750336 6750452 -192879698 + G-rich Low_complexity Low_complexity 3 115 0 444 259 5 53 chr5 6751827 6752016 -192878134 + GA-rich Low_complexity Low_complexity 1 180 0 873 163 7 13 chr5 6752167 6752363 -192877787 - FRAM SINE Alu 0 176 1 2179 105 0 22 chr5 6752368 6752683 -192877467 - AluSx SINE Alu -4 308 1 482 208 10 10 chr5 6752810 6752906 -192877244 - MLT2F LTR ERVL -567 96 1 1287 131 149 62 chr5 6752948 6753244 -192876906 + MLT1A1 LTR MaLR 1 332 -33 1957 121 0 0 chr5 6753244 6753560 -192876590 - AluSx SINE Alu 0 316 1 1287 131 149 62 chr5 6753560 6753598 -192876552 + MLT1A1 LTR MaLR 332 365 0 1079 134 31 76 chr5 6753803 6754026 -192876124 - AluJb SINE Alu -14 298 86 363 248 35 91 chr5 6754755 6754899 -192875251 - L1MC4 LINE L1 0 8042 7806 311 266 215 63 chr5 6755384 6755700 -192874450 + L2 LINE L2 2909 3272 0 414 267 82 30 chr5 6755944 6756079 -192874071 + L2 LINE L2 3123 3264 -8 1881 127 3 7 chr5 6756916 6757208 -192872942 - AluSg SINE Alu -19 291 1 1916 137 10 0 chr5 6757395 6757688 -192872462 - AluSx SINE Alu -16 296 1 2510 186 21 13 chr5 6757992 6758460 -192871690 + MER70A LTR ERVL 1 472 0 552 239 0 0 chr5 6758467 6758612 -192871538 - FLAM_A SINE Alu 0 145 1 186 133 0 0 chr5 6759519 6759549 -192870601 + (TTCC)n Simple_repeat Simple_repeat 1 30 0 2060 101 4 0 chr5 6759549 6759826 -192870324 - AluSq SINE Alu -33 280 3 322 286 60 65 chr5 6759931 6760062 -192870088 + L1MC4a LINE L1 6056 6187 -1621 2010 117 0 7 chr5 6760062 6760352 -192869798 - AluSx SINE Alu -24 288 1 322 286 60 65 chr5 6760352 6760388 -192869762 + L1MC4a LINE L1 6187 6222 -1586 2142 79 21 0 chr5 6760934 6761224 -192868926 + AluSx SINE Alu 1 296 -16 189 0 0 0 chr5 6761751 6761772 -192868378 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 655 244 77 0 chr5 6762034 6762202 -192867948 - MIR SINE MIR -71 191 11 3888 141 106 83 chr5 6762281 6763310 -192866840 + pTR5 LTR ERV1 742 2025 -413 410 185 34 27 chr5 6763310 6763421 -192866729 + LTR30 LTR ERV1 375 642 -80 2199 115 3 0 chr5 6763421 6763734 -192866416 + pTR5 LTR ERV1 79 392 -2046 181 351 54 27 chr5 6763785 6763896 -192866254 - L2 LINE L2 0 3313 3200 2044 92 28 57 chr5 6764265 6764582 -192865568 + AluSq SINE Alu 6 313 0 1754 164 28 104 chr5 6765886 6766143 -192864007 - MER45B DNA AcHobo -543 1038 832 2177 97 0 0 chr5 6766143 6766431 -192863719 - AluSx SINE Alu -24 288 1 1754 164 28 104 chr5 6766431 6766642 -192863508 - MER45B DNA AcHobo -749 832 606 1243 256 93 0 chr5 6766660 6766961 -192863189 - MER45B DNA AcHobo -711 329 1 531 31 0 0 chr5 6767162 6767227 -192862923 + (TATG)n Simple_repeat Simple_repeat 4 68 0 793 231 61 47 chr5 6768899 6769111 -192861039 + MIR SINE MIR 48 262 0 4315 124 15 126 chr5 6770806 6771730 -192858420 - LTR12 LTR ERV1 0 826 5 3071 155 18 26 chr5 6771746 6772354 -192857796 - pTR5 LTR ERV1 -1094 1344 742 875 198 6 0 chr5 6774242 6774414 -192855736 - FRAM SINE Alu -3 173 1 874 202 97 11 chr5 6774425 6774692 -192855458 + Charlie1b DNA MER1_type 109 398 -125 709 252 52 0 chr5 6775310 6775465 -192854685 - AluJo SINE Alu -137 175 13 2192 99 74 42 chr5 6775636 6775989 -192854161 + THE1B LTR MaLR 1 364 0 234 282 221 38 chr5 6775989 6776120 -192854030 - MIR SINE MIR -25 237 83 911 182 6 0 chr5 6776280 6776439 -192853711 + AluJb SINE Alu 138 297 -15 180 264 104 19 chr5 6776447 6776553 -192853597 + MIR SINE MIR 148 262 0 1752 182 29 45 chr5 6776585 6776825 -192853325 - L1MB8 LINE L1 -1 6177 5946 1915 117 3 43 chr5 6776825 6777150 -192853000 + AluSx SINE Alu 1 312 0 1752 182 29 45 chr5 6777150 6777338 -192852812 - L1MB8 LINE L1 -232 5946 5757 1595 143 4 19 chr5 6778031 6778289 -192851861 - AluJo SINE Alu -25 287 34 818 128 15 0 chr5 6779238 6779371 -192850779 - FRAM SINE Alu -24 152 18 1575 117 58 21 chr5 6779669 6779960 -192850190 + AluSx SINE Alu 2 303 -9 210 200 40 0 chr5 6779992 6780042 -192850108 + MIR SINE MIR 67 118 -144 604 243 47 42 chr5 6780054 6780268 -192849882 - MIR SINE MIR -30 232 18 333 0 0 0 chr5 6780575 6780612 -192849538 + (A)n Simple_repeat Simple_repeat 1 37 0 207 260 26 39 chr5 6781744 6781821 -192848329 - L2 LINE L2 -333 2980 2905 286 185 19 0 chr5 6782756 6782810 -192847340 - MER20 DNA MER1_type -6 213 159 1214 122 0 0 chr5 6783129 6783309 -192846841 + AluSg/x SINE Alu 120 299 -13 24 0 0 0 chr5 6783599 6783623 -192846527 + AT_rich Low_complexity Low_complexity 1 24 0 1841 115 10 20 chr5 6783721 6784017 -192846133 + AluSx SINE Alu 1 293 -19 667 152 27 0 chr5 6784097 6784209 -192845941 - FLAM_A SINE Alu -8 134 20 469 177 0 0 chr5 6784364 6784443 -192845707 - MER2 DNA MER2_type -266 79 1 257 167 0 0 chr5 6784444 6784486 -192845664 - MER2 DNA MER2_type -303 42 1 234 267 133 0 chr5 6784529 6784619 -192845531 + MIR SINE MIR 113 214 -48 1575 129 4 0 chr5 6785490 6785722 -192844428 - AluSq SINE Alu -14 299 67 447 208 50 0 chr5 6786009 6786110 -192844040 - MLT1H LTR MaLR 0 549 444 * 894 227 30 47 chr5 6786092 6786402 -192843748 - MLT1H LTR MaLR -248 307 30 199 217 0 0 chr5 6787132 6787178 -192842972 + L2 LINE L2 2911 2956 -316 226 333 0 0 chr5 6788325 6788397 -192841753 + L2 LINE L2 2902 2973 -299 2237 196 52 5 chr5 6788799 6789243 -192840907 + L1MB7 LINE L1 5579 6043 -141 1851 101 7 35 chr5 6789395 6789704 -192840446 - AluY SINE Alu 0 305 5 29 47 0 0 chr5 6790823 6790866 -192839284 + AT_rich Low_complexity Low_complexity 1 43 0 2083 186 38 53 chr5 6790866 6790989 -192839161 + MLT1D LTR MaLR 1 124 -381 2009 101 10 10 chr5 6790989 6791009 -192839141 - AluSx SINE Alu -13 299 280 189 0 0 0 chr5 6791009 6791030 -192839120 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 2009 101 10 10 chr5 6791030 6791307 -192838843 - AluSx SINE Alu -31 281 2 2083 186 38 53 chr5 6791307 6791688 -192838462 + MLT1D LTR MaLR 124 497 -8 967 242 54 0 chr5 6791872 6792095 -192838055 + L1MC4 LINE L1 6800 7034 -1008 1146 156 0 0 chr5 6792108 6792281 -192837869 - AluSq SINE Alu -140 173 1 2037 226 66 20 chr5 6792314 6792907 -192837243 + L1MC4 LINE L1 7043 7662 -380 192 40 0 0 chr5 6792925 6792950 -192837200 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 291 227 93 0 chr5 6792953 6793028 -192837122 + L1MB4 LINE L1 5812 5893 -278 1381 149 149 15 chr5 6793028 6793289 -192836861 + AluJb SINE Alu 2 297 -5 2236 104 0 0 chr5 6793291 6793598 -192836552 + AluSx SINE Alu 3 309 -3 1410 160 73 7 chr5 6793607 6793895 -192836255 + L1MB4 LINE L1 5873 6179 -1 603 170 0 0 chr5 6793937 6794043 -192836107 + L1MC4 LINE L1 7709 7814 -228 763 67 38 0 chr5 6794044 6794149 -192836001 + HY1 scRNA scRNA 2 110 -2 1434 126 29 17 chr5 6794266 6794504 -192835646 + AluSx SINE Alu 61 301 -11 744 218 175 26 chr5 6794889 6795197 -192834953 - L1MC4 LINE L1 -5 8037 7684 2211 99 0 0 chr5 6795200 6795493 -192834657 + AluSg1 SINE Alu 1 293 -16 324 0 0 0 chr5 6795672 6795708 -192834442 + (CA)n Simple_repeat Simple_repeat 2 37 0 1458 150 59 31 chr5 6795756 6795878 -192834272 + AluJb SINE Alu 1 118 -194 183 42 0 0 chr5 6795878 6795902 -192834248 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1458 150 59 31 chr5 6795902 6796066 -192834084 + AluJb SINE Alu 118 295 -17 282 268 65 89 chr5 6796243 6796489 -192833661 + MLT1K LTR MaLR 189 428 -160 232 222 11 78 chr5 6796600 6796690 -192833460 + MIR SINE MIR 179 262 0 817 165 0 122 chr5 6797149 6797337 -192832813 + FRAM SINE Alu 1 165 -1 658 113 0 0 chr5 6797251 6797348 -192832802 + AluJ/FRAM SINE Alu 216 312 0 193 93 0 47 chr5 6798547 6798590 -192831560 + (TCTCCC)n Simple_repeat Simple_repeat 3 43 0 30 77 0 0 chr5 6798911 6798976 -192831174 + GC_rich Low_complexity Low_complexity 1 65 0 379 292 99 5 chr5 6799801 6799993 -192830157 - MIR SINE MIR -52 210 1 596 281 101 0 chr5 6800430 6800647 -192829503 - MIR SINE MIR -6 256 18 617 0 14 0 chr5 6801147 6801220 -192828930 + (TTTTA)n Simple_repeat Simple_repeat 2 75 0 2140 117 0 0 chr5 6801222 6801504 -192828646 - AluSx SINE Alu -30 282 1 22 0 0 0 chr5 6801516 6801538 -192828612 + AT_rich Low_complexity Low_complexity 1 22 0 187 226 151 0 chr5 6801900 6801953 -192828197 - MIR3 SINE MIR -21 187 127 21 0 0 0 chr5 6802022 6802043 -192828107 + AT_rich Low_complexity Low_complexity 1 21 0 721 216 57 173 chr5 6802531 6802775 -192827375 - L2 LINE L2 0 3313 3042 635 39 0 0 chr5 6802775 6802853 -192827297 - AluY SINE Alu -11 301 224 721 216 57 173 chr5 6802853 6803194 -192826956 - L2 LINE L2 -271 3042 2709 23 0 0 0 chr5 6903459 6903482 -192726668 + AT_rich Low_complexity Low_complexity 1 23 0 279 312 78 7 chr5 6903501 6903655 -192726495 + MIR SINE MIR 20 184 -78 1148 268 134 5 chr5 6905164 6905574 -192724576 + Charlie1a DNA MER1_type 60 522 -933 2541 255 90 25 chr5 6906540 6907528 -192722622 - L1MC4a LINE L1 -35 7773 6722 258 260 65 32 chr5 6909137 6909260 -192720890 - L2 LINE L2 -25 3288 3162 1944 73 11 11 chr5 6909708 6909968 -192720182 - AluY SINE Alu -14 297 38 530 102 0 11 chr5 6910068 6910156 -192719994 + (GGAA)n Simple_repeat Simple_repeat 1 87 0 297 229 57 0 chr5 6910943 6911013 -192719137 + MER5A DNA MER1_type 45 118 -71 370 274 12 41 chr5 6911948 6912158 -192717992 + GA-rich Low_complexity Low_complexity 1 203 0 238 345 9 9 chr5 6912191 6912301 -192717849 + GA-rich Low_complexity Low_complexity 1 110 0 329 243 22 44 chr5 6912412 6912548 -192717602 + CT-rich Low_complexity Low_complexity 5 137 0 498 149 0 0 chr5 6912586 6912673 -192717477 + (T)n Simple_repeat Simple_repeat 1 87 0 222 237 0 82 chr5 6912742 6912839 -192717311 + C-rich Low_complexity Low_complexity 3 91 0 2191 109 13 3 chr5 6916477 6916779 -192713371 + AluSx SINE Alu 1 305 -7 2103 106 0 4 chr5 6918549 6918824 -192711326 - AluSg SINE Alu -19 291 18 762 276 61 82 chr5 6919226 6919882 -192710268 + L1MEd LINE L1 457 1098 -5021 1973 188 55 65 chr5 6920470 6920975 -192709175 + MLT2B3 LTR ERVL 1 500 -54 195 175 0 0 chr5 6920978 6921035 -192709115 + A-rich Low_complexity Low_complexity 1 57 0 398 121 0 30 chr5 6921036 6921102 -192709048 + MLT2A2 LTR ERVL 390 453 0 863 236 62 126 chr5 6922064 6922900 -192707250 + L1MCa LINE L1 854 1851 -4756 * 1632 192 60 6 chr5 6922889 6923238 -192706912 + L1MD1 LINE L1 5875 6242 0 313 197 0 15 chr5 6923373 6923439 -192706711 + Charlie1b DNA MER1_type 410 474 -49 233 291 0 0 chr5 6923791 6923846 -192706304 - MIR SINE MIR -113 149 95 196 352 28 0 chr5 6924922 6924993 -192705157 + MIR SINE MIR 54 126 -82 2336 80 0 22 chr5 6925278 6925591 -192704559 + AluSp SINE Alu 1 306 -7 342 0 0 0 chr5 6925764 6925802 -192704348 + (TG)n Simple_repeat Simple_repeat 2 39 0 1552 217 45 12 chr5 6926567 6926904 -192703246 - MER7A DNA MER2_type 0 346 1 284 341 11 21 chr5 6926966 6927084 -192703066 + MER5B DNA MER1_type 65 174 -4 2555 55 7 0 chr5 6928031 6928340 -192701810 + AluY SINE Alu 1 311 0 238 277 175 15 chr5 6928349 6928486 -192701664 + L3 LINE CR1 1226 1384 -193 15203 86 26 3 chr5 6928488 6931415 -192698735 - L1PA8 LINE L1 -20 6152 3161 216 111 0 0 chr5 6931497 6931533 -192698617 + (TAAAAA)n Simple_repeat Simple_repeat 2 37 0 184 275 0 0 chr5 6931587 6931627 -192698523 + L3b LINE CR1 1531 1570 -13 2323 194 26 7 chr5 6931748 6932165 -192697985 + MSTB LTR MaLR 2 426 0 186 317 0 0 chr5 6932854 6932914 -192697236 - MIR SINE MIR -146 116 57 828 174 95 26 chr5 6933868 6934058 -192696092 - MER105 DNA DNA -1 203 1 297 272 184 53 chr5 6934134 6934340 -192695810 - L2 LINE L2 -5 3308 3076 2521 76 0 0 chr5 6934344 6934648 -192695502 - AluY SINE Alu -7 304 1 23 78 0 0 chr5 6935334 6935385 -192694765 + AT_rich Low_complexity Low_complexity 1 51 0 847 258 125 31 chr5 6935402 6935786 -192694364 - L1MC4 LINE L1 -2096 5946 5527 215 233 0 0 chr5 6938191 6938234 -192691916 - L2 LINE L2 -1727 1587 1545 183 326 22 34 chr5 6938539 6938628 -192691522 - L2 LINE L2 -352 2962 2875 327 262 119 9 chr5 6946550 6946821 -192683329 - L1MEd LINE L1 -4862 1208 916 226 254 91 73 chr5 6946913 6947133 -192683017 - L1MEd LINE L1 -5291 779 556 393 336 54 21 chr5 6948126 6948367 -192681783 - MIR SINE MIR -12 250 2 2184 177 3 0 chr5 6948670 6949014 -192681136 + MER7A DNA MER2_type 4 346 0 570 158 61 0 chr5 6949018 6949132 -192681018 + MLT2D LTR ERVL 1 121 -293 5331 165 30 24 chr5 6949134 6950394 -192679756 + L1MA7 LINE L1 5020 6286 -5 1394 157 15 168 chr5 6950408 6950688 -192679462 + MLT2D LTR ERVL 111 335 -62 261 0 0 0 chr5 6950688 6950717 -192679433 + (TG)n Simple_repeat Simple_repeat 2 30 0 1394 157 15 168 chr5 6950717 6950770 -192679380 + MLT2D LTR ERVL 335 394 -3 259 366 43 6 chr5 6951702 6951866 -192678284 - MIR SINE MIR -26 236 67 933 240 4 39 chr5 6951927 6952156 -192677994 - MER58A DNA MER1_type 0 224 4 241 167 0 42 chr5 6952364 6952412 -192677738 - MSTB LTR MaLR 0 426 381 1355 106 21 0 chr5 6952412 6952600 -192677550 - THE1C-int LTR MaLR -498 1082 891 544 126 0 23 chr5 6952574 6952661 -192677489 - THE1C-int LTR MaLR -1492 88 4 * 1831 151 46 40 chr5 6952667 6953038 -192677112 - THE1C LTR MaLR -2 373 1 1672 117 19 30 chr5 6953973 6954280 -192675870 - AluSq SINE Alu 0 327 24 1657 85 35 4 chr5 6954599 6954858 -192675292 - AluY SINE Alu -22 289 23 1578 151 68 0 chr5 6955334 6955613 -192674537 + Tigger2 DNA MER2_type 2418 2715 -3 603 238 72 18 chr5 6955665 6955888 -192674262 + L1ME2 LINE L1 4929 5163 -983 904 188 4 2 chr5 6955894 6956140 -192674010 + AluJb SINE Alu 2 295 -17 1387 256 45 8 chr5 6956143 6956662 -192673488 + L1ME2 LINE L1 5170 5707 -457 414 349 9 5 chr5 6956734 6956949 -192673201 + L1ME2 LINE L1 5842 6057 -107 2044 196 43 5 chr5 6957319 6957717 -192672433 + MLT2C2 LTR ERVL 4 416 -48 183 184 0 0 chr5 6957722 6957760 -192672390 + (TCCA)n Simple_repeat Simple_repeat 3 40 0 249 65 0 0 chr5 6957768 6957799 -192672351 - MLT2B1 LTR ERVL 0 520 490 266 174 0 0 chr5 6957819 6957865 -192672285 + MLT2C2 LTR ERVL 509 554 0 342 343 30 18 chr5 6960225 6960394 -192669756 + MIR SINE MIR 86 256 -6 21 0 0 0 chr5 6962036 6962057 -192668093 + AT_rich Low_complexity Low_complexity 1 21 0 1854 108 36 33 chr5 6962178 6962484 -192667666 - AluSx SINE Alu -5 307 1 622 349 7 0 chr5 6962889 6963158 -192666992 + L1ME LINE L1 5495 5765 -356 720 287 116 10 chr5 6963399 6963849 -192666301 - MLT1G LTR MaLR -41 549 13 321 96 19 0 chr5 6964102 6964154 -192665996 - L1PA15 LINE L1 -642 5526 5474 * 2469 144 10 5 chr5 6964151 6964540 -192665610 + L1PA15 LINE L1 5515 5905 -260 3488 62 5 7 chr5 6964540 6964989 -192665161 + LTR7 LTR ERV1 1 448 -2 10462 98 25 16 chr5 6964991 6966575 -192663575 + HERVH LTR ERV1 1 1599 -6114 23 33 0 0 chr5 6967191 6967221 -192662929 + AT_rich Low_complexity Low_complexity 1 30 0 1528 294 63 10 chr5 6967815 6968040 -192662110 - L1ME3A LINE L1 0 6170 5946 579 292 153 44 chr5 6968040 6968569 -192661581 - L1MB4 LINE L1 -259 5921 5451 2879 158 68 2 chr5 6968569 6969096 -192661054 - MER34B LTR ERV1 0 565 4 579 292 153 44 chr5 6969096 6969662 -192660488 - L1MB4 LINE L1 -729 5451 4685 22 0 0 0 chr5 6969686 6969708 -192660442 + AT_rich Low_complexity Low_complexity 1 22 0 1922 107 38 3 chr5 6969710 6970000 -192660150 - AluSg SINE Alu -6 304 5 374 230 0 11 chr5 6970022 6970109 -192660041 - MLT1A2 LTR MaLR -1 373 288 9935 96 11 12 chr5 6970213 6971634 -192658516 + HERVH LTR ERV1 1569 2987 -4726 812 169 20 0 chr5 6971628 6971776 -192658374 + HERVH LTR ERV1 3140 3290 -4423 * 3334 122 6 2 chr5 6971766 6972266 -192657884 + HERVH LTR ERV1 3492 3993 -3720 4386 144 3 1 chr5 6972268 6972929 -192657221 + HERVH LTR ERV1 4488 5149 -2564 902 113 7 13 chr5 6972930 6973080 -192657070 + HERVH LTR ERV1 5600 5748 -1965 1850 74 8 0 chr5 6973111 6973369 -192656781 + HERVH LTR ERV1 7429 7688 -25 1603 143 32 11 chr5 6973378 6973399 -192656751 + L1PA15 LINE L1 5880 5899 -266 3482 64 0 9 chr5 6973399 6973851 -192656299 + LTR7 LTR ERV1 1 448 -2 1603 143 32 11 chr5 6973851 6974109 -192656041 + L1PA15 LINE L1 5899 6165 0 2534 153 70 98 chr5 6974638 6975371 -192654779 - LTR8A LTR ERV1 0 691 1 420 167 0 0 chr5 6975921 6975987 -192654163 + MER41C LTR ERV1 1 66 -488 273 111 0 0 chr5 6975983 6976019 -192654131 + MER41C LTR ERV1 25 60 -494 * 300 116 23 0 chr5 6976019 6976062 -192654088 + MER41C LTR ERV1 23 66 -488 243 111 28 0 chr5 6976058 6976094 -192654056 + MER41C LTR ERV1 25 61 -493 * 3138 131 82 0 chr5 6976094 6976584 -192653566 + MER41C LTR ERV1 25 554 0 251 237 31 82 chr5 6976610 6976707 -192653443 + MIR SINE MIR 92 183 -79 248 278 67 0 chr5 6976807 6976897 -192653253 - MER117 DNA MER1_type -37 160 65 2279 98 3 0 chr5 6977616 6977922 -192652228 - AluSp SINE Alu -6 307 1 2505 116 16 8 chr5 6978324 6978696 -192651454 + THE1C LTR MaLR 1 375 0 10410 116 30 15 chr5 6978696 6980253 -192649897 + THE1C-int LTR MaLR 1 1580 0 2560 116 14 5 chr5 6980253 6980624 -192649526 + THE1C LTR MaLR 1 374 -1 243 231 81 46 chr5 6981025 6981198 -192648952 + L1MCc LINE L1 1291 1469 -4954 320 241 43 43 chr5 6981323 6981439 -192648711 + L1MCc LINE L1 1907 2022 -4919 216 0 0 0 chr5 6981441 6981465 -192648685 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 5492 116 39 5 chr5 6981467 6982146 -192648004 - L1PA13 LINE L1 -11 6152 5497 2249 87 3 6 chr5 6982146 6982458 -192647692 - AluY SINE Alu 0 311 1 5492 116 39 5 chr5 6982458 6983167 -192646983 - L1PA13 LINE L1 -666 5497 4757 22 0 0 0 chr5 6983310 6983332 -192646818 + AT_rich Low_complexity Low_complexity 1 22 0 1638 163 3 26 chr5 6983466 6983772 -192646378 - AluJo SINE Alu -13 299 1 316 266 36 27 chr5 6983795 6983906 -192646244 + MIR SINE MIR 16 122 -93 3356 286 171 29 chr5 6983931 6985887 -192644263 + L2 LINE L2 1060 3312 -1 293 230 127 56 chr5 6986500 6986626 -192643524 - MIR3 SINE MIR -51 157 23 215 234 78 52 chr5 6987165 6987242 -192642908 + MIR SINE MIR 61 139 -69 698 208 127 34 chr5 6987376 6987763 -192642387 + MER31B LTR ERV1 1 543 0 1344 235 87 20 chr5 6989514 6989952 -192640198 + MLT1C LTR MaLR 1 467 0 1702 231 62 9 chr5 6990501 6990938 -192639212 - MLT1C LTR MaLR 0 467 8 2019 91 0 21 chr5 6992236 6992521 -192637629 + AluY SINE Alu 17 295 -16 1316 160 22 9 chr5 6992590 6992821 -192637329 + MLT1C LTR MaLR 1 234 -233 1958 113 17 125 chr5 6993075 6993483 -192636667 - THE1B LTR MaLR 0 364 1 1927 112 7 0 chr5 6993777 6994055 -192636095 - L1PA12 LINE L1 -141 6027 5748 1773 171 105 0 chr5 6994094 6994399 -192635751 + MER1B DNA MER1_type 1 337 0 2421 126 27 10 chr5 6995877 6996283 -192633867 - L1MA3 LINE L1 0 6305 5893 1511 225 31 39 chr5 6996293 6996707 -192633443 - L1MB5 LINE L1 -1 6173 5763 2515 20 0 3 chr5 6996903 6997199 -192632951 - AluY SINE Alu -16 295 1 964 301 106 41 chr5 6997206 6997771 -192632379 + L1M4 LINE L1 2769 3370 -2776 242 259 104 50 chr5 6997894 6998114 -192632036 + L1M4 LINE L1 3545 3776 -2370 2262 156 80 3 chr5 6998148 6998538 -192631612 + MSTA LTR MaLR 9 428 0 307 154 0 182 chr5 6998569 6998679 -192631471 + L1MC4 LINE L1 6614 6703 -1339 313 338 22 37 chr5 6998756 6998892 -192631258 + L1ME1 LINE L1 5730 5863 -303 30 45 0 0 chr5 6999231 6999275 -192630875 + AT_rich Low_complexity Low_complexity 1 44 0 892 270 41 55 chr5 7000560 7001019 -192629131 - LTR16A1 LTR ERVL -4 453 1 250 359 29 34 chr5 7001181 7001390 -192628760 - HERV16 LTR ERVL -367 5287 5080 978 323 77 45 chr5 7001466 7002583 -192627567 - HERV16 LTR ERVL -743 5021 3841 825 340 42 11 chr5 7002615 7003062 -192627088 - HERV16 LTR ERVL -4535 461 1 660 276 89 25 chr5 7003063 7003227 -192626923 - LTR16A1 LTR ERVL -1 456 304 1850 211 8 8 chr5 7003227 7003592 -192626558 - MLT1A1 LTR MaLR 0 365 1 660 276 89 25 chr5 7003592 7003799 -192626351 - LTR16A1 LTR ERVL -153 304 16 239 274 128 10 chr5 7003802 7003904 -192626246 + MIR SINE MIR 39 152 -110 480 248 0 0 chr5 7006045 7006150 -192624000 - L1MC5 LINE L1 -542 7419 7315 872 195 7 7 chr5 7006160 7006314 -192623836 + MLT1D LTR MaLR 1 154 -351 228 189 0 0 chr5 7007694 7007731 -192622419 + L1P LINE L1 4885 4921 -1225 315 281 189 18 chr5 7007960 7008241 -192621909 + L1ME3A LINE L1 1627 1955 -4441 325 286 42 60 chr5 7008277 7008568 -192621582 + L1ME3A LINE L1 2016 2267 -3948 1609 145 64 28 chr5 7008568 7008850 -192621300 + AluJb SINE Alu 1 292 -20 325 286 42 60 chr5 7008850 7008896 -192621254 + L1ME3A LINE L1 2267 2312 -3903 243 251 80 68 chr5 7008917 7009041 -192621109 + L1ME3A LINE L1 4498 4626 -1589 1959 144 18 37 chr5 7009041 7009423 -192620727 - THE1C LTR MaLR 0 375 1 243 251 80 68 chr5 7009423 7009461 -192620689 + L1ME3A LINE L1 4626 4662 -1553 291 266 70 21 chr5 7009510 7009653 -192620497 + L1ME3A LINE L1 5536 5685 -554 412 257 73 0 chr5 7009673 7009809 -192620341 + L1ME3A LINE L1 5777 5922 -317 1834 148 0 0 chr5 7010223 7010480 -192619670 - AluSx SINE Alu -20 292 36 25 31 0 0 chr5 7013336 7013368 -192616782 + AT_rich Low_complexity Low_complexity 1 32 0 288 359 23 0 chr5 7015603 7015731 -192614419 + LTR16A LTR ERVL 16 146 -304 636 327 81 0 chr5 7015766 7015977 -192614173 + LTR16A LTR ERVL 223 450 0 2371 93 3 0 chr5 7016522 7016822 -192613328 - AluSp SINE Alu -12 301 1 658 233 127 12 chr5 7016917 7017170 -192612980 + MER114 LTR ERV 1 282 -366 920 226 17 41 chr5 7017170 7017619 -192612531 + L1ME2 LINE L1 5515 6046 -118 493 289 41 5 chr5 7017726 7017923 -192612227 + MER114 LTR ERV 445 648 0 1984 219 35 22 chr5 7018216 7018705 -192611445 + MLT1D LTR MaLR 3 497 -8 1111 209 34 47 chr5 7018757 7019053 -192611097 - L1ME2 LINE L1 -10 6154 5863 1735 250 53 21 chr5 7019055 7019886 -192610264 - L1ME2 LINE L1 -396 5768 4905 2450 96 0 3 chr5 7020486 7020799 -192609351 + AluSp SINE Alu 1 312 -1 27 29 0 0 chr5 7021152 7021186 -192608964 + AT_rich Low_complexity Low_complexity 1 34 0 252 350 26 8 chr5 7021838 7021955 -192608195 + L2 LINE L2 3150 3268 -4 208 250 11 11 chr5 7022337 7022416 -192607734 + (TA)n Simple_repeat Simple_repeat 2 83 -6 2392 87 0 3 chr5 7022416 7022728 -192607422 + AluY SINE Alu 1 311 0 208 250 11 11 chr5 7022728 7022736 -192607414 + (TA)n Simple_repeat Simple_repeat 82 89 0 304 325 126 15 chr5 7023179 7023385 -192606765 + LTR33 LTR ERVL 293 521 0 2113 185 28 28 chr5 7023963 7024385 -192605765 + MSTB LTR MaLR 2 423 -3 9269 180 21 8 chr5 7024389 7026019 -192604131 + MSTB-int LTR MaLR 1 1651 0 1175 160 5 0 chr5 7026021 7026209 -192603941 + MSTB LTR MaLR 3 191 -235 1104 173 309 19 chr5 7026312 7026660 -192603490 - MER31B LTR ERV1 -9 505 6 23 0 0 0 chr5 7027500 7027523 -192602627 + AT_rich Low_complexity Low_complexity 1 23 0 621 228 28 62 chr5 7027634 7027845 -192602305 + MLT1G LTR MaLR 1 204 -391 1503 186 84 12 chr5 7027846 7028179 -192601971 + MLT1A1 LTR MaLR 9 365 0 1058 214 34 8 chr5 7028252 7028486 -192601664 + MLT1G LTR MaLR 351 590 0 23 0 0 0 chr5 7028526 7028549 -192601601 + AT_rich Low_complexity Low_complexity 1 23 0 24 0 0 0 chr5 7028713 7028737 -192601413 + AT_rich Low_complexity Low_complexity 1 24 0 221 278 19 0 chr5 7029061 7029115 -192601035 - L2 LINE L2 -253 3060 3006 2548 164 67 61 chr5 7029278 7029900 -192600250 + L1MC1 LINE L1 5710 6332 -1 260 243 21 7 chr5 7032692 7032836 -192597314 + (TG)n Simple_repeat Simple_repeat 1 146 0 571 227 244 27 chr5 7034143 7034635 -192595515 + LTR50 LTR ERVL 83 791 -4 285 29 0 0 chr5 7036492 7036526 -192593624 + (TG)n Simple_repeat Simple_repeat 1 34 0 204 132 26 0 chr5 7036526 7036564 -192593586 + GA-rich Low_complexity Low_complexity 2 40 0 212 364 31 8 chr5 7037429 7037558 -192592592 + MIR SINE MIR 20 151 -111 931 189 0 11 chr5 7037933 7038113 -192592037 - MER49 LTR ERV1 0 923 746 2176 129 26 6 chr5 7038113 7038455 -192591695 - MER49 LTR ERV1 -565 358 10 1047 202 40 0 chr5 7038505 7038703 -192591447 + MER20 DNA MER1_type 5 210 -9 291 54 0 0 chr5 7038720 7038757 -192591393 + (TG)n Simple_repeat Simple_repeat 2 38 0 258 156 0 0 chr5 7039565 7039610 -192590540 + CT-rich Low_complexity Low_complexity 2 46 0 2200 64 44 17 chr5 7041233 7041530 -192588620 - AluY SINE Alu -6 305 1 252 0 0 0 chr5 7042119 7042147 -192588003 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 250 394 7 19 chr5 7042845 7043000 -192587150 + MER5A DNA MER1_type 1 153 -36 191 114 29 0 chr5 7043702 7043737 -192586413 + (TAGA)n Simple_repeat Simple_repeat 4 39 0 210 37 0 0 chr5 7043829 7043856 -192586294 + (CAA)n Simple_repeat Simple_repeat 1 27 0 332 325 22 39 chr5 7043869 7044176 -192585974 + L1MCa LINE L1 1164 1526 -4890 186 43 0 0 chr5 7044299 7044322 -192585828 + (A)n Simple_repeat Simple_repeat 1 23 0 274 314 16 21 chr5 7044352 7044546 -192585604 + L1MCa LINE L1 1684 1876 -4550 920 96 7 44 chr5 7044552 7044687 -192585463 - FRAM SINE Alu -27 149 20 233 303 0 9 chr5 7044693 7044802 -192585348 + L1MCa LINE L1 1917 2024 -4583 451 101 0 14 chr5 7044803 7044872 -192585278 + MER4A LTR ERV1 1 68 -596 923 250 63 31 chr5 7046933 7047288 -192582862 - MLT2D LTR ERVL -8 389 1 220 349 28 28 chr5 7047644 7047750 -192582400 + L2 LINE L2 2953 3058 -214 242 372 16 16 chr5 7047968 7048097 -192582053 + MIR3 SINE MIR 3 131 -77 425 296 66 49 chr5 7048243 7048469 -192581681 + MIR SINE MIR 9 238 -24 218 205 157 0 chr5 7048538 7048621 -192581529 + MIR SINE MIR 59 154 -108 247 297 40 20 chr5 7049578 7049679 -192580471 + MIR SINE MIR 50 152 -110 21 36 0 0 chr5 7050908 7050936 -192579214 + AT_rich Low_complexity Low_complexity 1 28 0 682 143 56 8 chr5 7051288 7051414 -192578736 - L1MB5 LINE L1 0 6174 6043 2427 72 0 7 chr5 7051557 7051863 -192578287 - AluY SINE Alu -7 304 1 624 51 0 25 chr5 7051863 7051942 -192578208 - AluY SINE Alu -177 134 58 1088 166 59 63 chr5 7052322 7052512 -192577638 - L1MB5 LINE L1 -122 6052 5862 1726 179 43 18 chr5 7052512 7052841 -192577309 + MER1B DNA MER1_type 1 337 0 1088 166 59 63 chr5 7052841 7052921 -192577229 - L1MB5 LINE L1 -312 5862 5783 1079 203 11 103 chr5 7052940 7053319 -192576831 - MLT1B LTR MaLR -32 358 15 1230 199 139 42 chr5 7053337 7053576 -192576574 - L1MB5 LINE L1 -386 5788 5507 2238 125 3 0 chr5 7053576 7053887 -192576263 - AluSx SINE Alu 0 312 1 1230 199 139 42 chr5 7053887 7053979 -192576171 - L1MB5 LINE L1 -667 5507 5425 471 247 61 47 chr5 7053977 7054212 -192575938 - L1MC/D LINE L1 -350 5771 5541 * 3204 199 61 15 chr5 7054415 7055169 -192574981 - L1MB5 LINE L1 -1910 4236 3448 3299 191 30 80 chr5 7055172 7056024 -192574126 + L1PA12 LINE L1 5347 6156 -12 269 250 47 0 chr5 7056353 7056417 -192573733 + L2 LINE L2 2897 2963 -309 636 209 32 0 chr5 7056419 7056562 -192573588 - L1MC4 LINE L1 -964 7062 6884 231 267 0 80 chr5 7056663 7056738 -192573412 + L2 LINE L2 3245 3313 0 1244 209 133 37 chr5 7057415 7057839 -192572311 + MER66A LTR ERV1 97 478 0 239 284 81 20 chr5 7058776 7058924 -192571226 - L1 LINE L1 -1723 4423 4267 2504 284 72 37 chr5 7059829 7061540 -192568610 - L1 LINE L1 -2230 3916 2146 378 260 42 0 chr5 7061561 7061657 -192568493 + MER45A DNA AcHobo 79 178 0 254 254 218 0 chr5 7061805 7061915 -192568235 - MIR SINE MIR -2 260 127 230 341 44 0 chr5 7061942 7062033 -192568117 - MIR SINE MIR -123 139 45 198 0 0 0 chr5 7063230 7063252 -192566898 + (A)n Simple_repeat Simple_repeat 1 22 0 186 43 0 0 chr5 7063668 7063691 -192566459 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 1377 112 0 16 chr5 7063711 7063898 -192566252 - AluSx SINE Alu -127 185 2 1023 214 119 35 chr5 7064861 7065209 -192564941 - MER31B LTR ERV1 0 543 74 4149 134 47 16 chr5 7066950 7067628 -192562522 - LTR34 LTR ERV1 0 699 1 25 0 0 0 chr5 7069028 7069053 -192561097 + AT_rich Low_complexity Low_complexity 1 25 0 473 279 80 63 chr5 7069170 7069532 -192560618 + L1ME4a LINE L1 5574 5941 -180 363 282 24 8 chr5 7069725 7069764 -192560386 - L1MA10 LINE L1 -14 6320 6282 1782 254 34 44 chr5 7069764 7070355 -192559795 - L1ME1 LINE L1 -44 6122 5538 6815 85 2 2 chr5 7070381 7071616 -192558534 - L1PA10 LINE L1 0 6168 4917 439 286 82 48 chr5 7071691 7071960 -192558190 - LTR43 LTR ERV1 -145 457 180 988 217 9 9 chr5 7072475 7072687 -192557463 - L1ME1 LINE L1 -629 5537 5326 2631 231 113 85 chr5 7072689 7072940 -192557210 + L1M4 LINE L1 3611 3854 -2292 372 111 0 0 chr5 7072940 7073003 -192557147 + (TATG)n Simple_repeat Simple_repeat 2 64 0 2631 231 113 85 chr5 7073003 7073249 -192556901 + L1M4 LINE L1 3854 4092 -2054 1946 141 3 25 chr5 7073249 7073568 -192556582 - AluSx SINE Alu 0 312 1 2631 231 113 85 chr5 7073568 7074617 -192555533 + L1M4 LINE L1 4092 5335 -811 2219 119 64 9 chr5 7074894 7075238 -192554912 - THE1B LTR MaLR -1 363 1 203 187 40 27 chr5 7076287 7076362 -192553788 + (CATATA)n Simple_repeat Simple_repeat 3 78 0 183 326 58 12 chr5 7076834 7076920 -192553230 - MIR SINE MIR -153 109 20 730 293 127 21 chr5 7076926 7077305 -192552845 - L2 LINE L2 -1 3312 2894 283 275 113 50 chr5 7077613 7077773 -192552377 + MIR3 SINE MIR 13 182 -26 212 100 50 0 chr5 7078723 7078763 -192551387 + (TG)n Simple_repeat Simple_repeat 2 43 0 879 161 6 25 chr5 7079516 7079678 -192550472 - THE1C LTR MaLR 0 375 217 583 162 9 9 chr5 7079682 7079787 -192550363 - THE1C LTR MaLR -321 107 3 354 163 28 0 chr5 7081943 7082015 -192548135 + Tigger4(Zombi) DNA MER2_type -2 2717 -14 1810 166 7 14 chr5 7082289 7082584 -192547566 + AluJb SINE Alu 1 293 -19 709 258 79 97 chr5 7083400 7083908 -192546242 + MLT1F LTR MaLR 28 526 -16 5137 106 13 12 chr5 7084474 7085164 -192544986 - LTR8 LTR ERV1 0 691 1 2314 165 89 50 chr5 7086091 7086624 -192543526 + LTR8A LTR ERV1 1 554 -173 2256 162 77 2 chr5 7086624 7087026 -192543124 + MER57B LTR ERV1 3 434 0 880 222 20 86 chr5 7087840 7088142 -192542008 + MER33 DNA MER1_type 7 288 -36 411 163 163 0 chr5 7088165 7088263 -192541887 + L1MA8 LINE L1 6170 6283 -8 226 131 66 82 chr5 7088268 7088329 -192541821 + MER33 DNA MER1_type 258 317 -7 329 305 207 53 chr5 7088918 7089256 -192540894 - L1ME LINE L1 -5629 441 52 3241 159 19 62 chr5 7089530 7090170 -192539980 - LTR9 LTR ERV1 0 612 1 2072 187 84 25 chr5 7090573 7091189 -192538961 - MER39 LTR ERV1 -5 702 2 281 261 51 72 chr5 7091337 7091475 -192538675 + MLT1H LTR MaLR 37 171 -378 320 287 18 43 chr5 7091581 7091646 -192538504 + MER41B LTR ERV1 54 119 -516 2455 79 0 10 chr5 7091646 7091951 -192538199 + AluY SINE Alu 1 302 -9 320 287 18 43 chr5 7091951 7092134 -192538016 + MER41B LTR ERV1 119 430 -205 250 260 130 41 chr5 7092523 7092646 -192537504 + MLT1H LTR MaLR 400 533 -16 1763 165 9 39 chr5 7092771 7093105 -192537045 + MER65A LTR ERV1 3 326 -119 554 90 51 0 chr5 7093095 7093173 -192536977 + MER51B LTR ERV1 296 377 0 * 1800 199 18 15 chr5 7094826 7095168 -192534982 + MER61A LTR ERV1 1 343 0 4456 133 61 22 chr5 7095168 7095926 -192534224 + MER61A-int LTR ERV1 1 787 -4430 * 26149 98 27 14 chr5 7095911 7099710 -192530440 + MER61A-int LTR ERV1 1320 5216 -1 1913 164 26 23 chr5 7099710 7100052 -192530098 + MER61A LTR ERV1 1 343 0 455 273 62 11 chr5 7100185 7100361 -192529789 - MIR SINE MIR -58 204 20 641 284 39 0 chr5 7100942 7101146 -192529004 + L1ME2 LINE L1 5364 5575 -2210 553 169 0 0 chr5 7101155 7101238 -192528912 + AluJ/FLAM SINE Alu 2 84 -228 282 256 156 11 chr5 7101238 7101328 -192528822 + L1ME2 LINE L1 5573 5675 -489 1670 221 56 25 chr5 7101472 7101921 -192528229 + L1ME2 LINE L1 5683 6145 -19 2092 164 62 34 chr5 7102308 7102724 -192527426 - MSTA LTR MaLR 0 428 1 1422 236 15 18 chr5 7102747 7103141 -192527009 + Charlie1b DNA MER1_type 2 394 -129 26 30 0 0 chr5 7103141 7103174 -192526976 + AT_rich Low_complexity Low_complexity 1 33 0 306 291 47 47 chr5 7103419 7103591 -192526559 + MIR SINE MIR 47 218 -44 201 206 175 16 chr5 7103801 7103864 -192526286 + L2 LINE L2 3200 3272 0 21 57 0 0 chr5 7104147 7104182 -192525968 + AT_rich Low_complexity Low_complexity 1 35 0 2008 186 49 3 chr5 7105858 7106207 -192523943 - MLT1A1 LTR MaLR 0 365 1 189 141 41 59 chr5 7106265 7106435 -192523715 + (TTATA)n Simple_repeat Simple_repeat 3 169 0 * 273 118 87 6 chr5 7106404 7106565 -192523585 + (TA)n Simple_repeat Simple_repeat 1 174 0 28 29 0 0 chr5 7106635 7106670 -192523480 + AT_rich Low_complexity Low_complexity 1 35 0 1631 202 74 3 chr5 7107246 7107583 -192522567 + MLT1A1 LTR MaLR 4 364 -1 1342 241 126 38 chr5 7107932 7107998 -192522152 - MLT1D LTR MaLR 0 626 567 1895 94 0 4 chr5 7107998 7108242 -192521908 + AluSq SINE Alu 1 243 -70 1342 241 126 38 chr5 7108242 7108740 -192521410 - MLT1D LTR MaLR -59 567 4 485 117 64 0 chr5 7109479 7109573 -192520577 - L1MA8 LINE L1 -101 6190 6091 571 173 9 0 chr5 7109573 7109667 -192520483 + L1MA8 LINE L1 6179 6289 -2 252 322 9 0 chr5 7109734 7109849 -192520301 + L1MCc LINE L1 1285 1400 -5023 572 223 81 39 chr5 7109858 7110183 -192519967 + MLT1F LTR MaLR 175 542 0 1238 249 36 42 chr5 7110183 7110661 -192519489 + L1ME3A LINE L1 5646 6120 -50 4641 175 111 32 chr5 7112535 7113612 -192516538 - MER52C LTR ERV1 0 1278 116 294 73 0 0 chr5 7114357 7114398 -192515752 + (CA)n Simple_repeat Simple_repeat 2 42 0 2040 148 35 27 chr5 7114760 7115132 -192515018 + THE1C LTR MaLR 1 375 0 402 317 7 21 chr5 7115649 7115791 -192514359 - L2 LINE L2 -1 3312 3173 1113 294 75 21 chr5 7115880 7116437 -192513713 - L2 LINE L2 -413 2901 2315 1285 268 26 52 chr5 7116444 7116907 -192513243 + MLT1C LTR MaLR 10 460 -7 565 283 143 7 chr5 7116921 7117214 -192512936 - L2 LINE L2 -1001 2313 1981 2088 204 20 32 chr5 7117233 7117675 -192512475 + MER70A LTR ERVL 36 472 0 259 284 128 0 chr5 7117752 7117861 -192512289 - L2 LINE L2 -1391 1923 1801 298 320 77 13 chr5 7117976 7118132 -192512018 + L2 LINE L2 2623 2788 -526 366 326 99 38 chr5 7118228 7118677 -192511473 + L1MD1 LINE L1 5269 5743 -419 * 618 225 8 0 chr5 7118654 7118783 -192511367 - L1M2 LINE L1 -494 5818 5689 769 180 0 0 chr5 7118783 7118914 -192511236 + L1MA9 LINE L1 6174 6312 0 303 296 11 0 chr5 7118918 7119006 -192511144 + L1MD1 LINE L1 6033 6121 -121 1323 138 0 0 chr5 7119006 7119195 -192510955 - AluSp SINE Alu -7 306 118 956 93 0 0 chr5 7119295 7119413 -192510737 - AluSq/x SINE Alu -194 118 1 609 197 8 15 chr5 7119413 7119545 -192510605 + L1MD1 LINE L1 6112 6242 0 301 233 19 58 chr5 7119620 7119723 -192510427 - HAL1 LINE L1 -1481 1026 928 625 274 96 15 chr5 7119984 7120254 -192509896 - HAL1 LINE L1 -2213 294 3 1866 196 2 45 chr5 7120266 7120663 -192509487 - MLT1B LTR MaLR -8 382 3 1615 180 39 29 chr5 7120979 7121285 -192508865 - AluJb SINE Alu -3 309 1 560 244 77 18 chr5 7121757 7121925 -192508225 - MER45A DNA AcHobo 0 178 1 2356 60 4 0 chr5 7123046 7123366 -192506784 + AluY SINE Alu 1 321 0 3280 149 39 6 chr5 7124063 7124573 -192505577 - MER1A DNA MER1_type 0 527 1 533 233 43 43 chr5 7125177 7125465 -192504685 + MLT1D LTR MaLR 128 505 0 468 218 0 15 chr5 7125989 7126107 -192504043 - L1MC4 LINE L1 -364 7631 7448 270 0 0 0 chr5 7126120 7126150 -192504000 + (TG)n Simple_repeat Simple_repeat 2 31 0 1695 211 124 63 chr5 7127361 7127935 -192502215 + MLT1E2 LTR MaLR 2 610 -16 2427 185 57 19 chr5 7130051 7130071 -192500079 - L1MC2 LINE L1 -1 6343 6325 2529 61 0 0 chr5 7130071 7130367 -192499783 - AluY SINE Alu -15 296 1 2427 185 57 19 chr5 7130367 7130877 -192499273 - L1MC2 LINE L1 -19 6325 5793 2029 145 0 0 chr5 7130887 7131184 -192498966 - AluSx SINE Alu -13 299 3 871 127 14 18 chr5 7131198 7131415 -192498735 - L1MC1 LINE L1 -271 6062 5698 2003 102 3 108 chr5 7132155 7132478 -192497672 + AluSq SINE Alu 1 289 -14 12936 206 14 17 chr5 7132636 7132683 -192497467 - L1PA15 LINE L1 -1 6164 6118 2053 144 0 0 chr5 7132683 7133024 -192497126 - AluSx SINE Alu 0 312 1 12936 206 14 17 chr5 7133024 7136398 -192493752 - L1PA15 LINE L1 -47 6118 2762 185 0 40 0 chr5 7136398 7136423 -192493727 + (TTG)n Simple_repeat Simple_repeat 2 27 0 12936 206 14 17 chr5 7136423 7136646 -192493504 - L1PA15 LINE L1 -3403 2762 2540 343 273 78 8 chr5 7137222 7137350 -192492800 - LTR50 LTR ERVL -160 635 499 263 298 142 60 chr5 7138004 7138306 -192491844 - HERVL LTR ERVL -255 5399 5073 1793 327 76 27 chr5 7138386 7139621 -192490529 - HERVL LTR ERVL -1234 4530 3157 488 89 40 20 chr5 7140279 7140380 -192489770 + GA-rich Low_complexity Low_complexity 3 105 0 848 110 6 33 chr5 7140380 7140562 -192489588 + (GAAA)n Simple_repeat Simple_repeat 4 180 0 214 184 0 0 chr5 7140562 7140600 -192489550 + GA-rich Low_complexity Low_complexity 2 39 0 1220 207 70 14 chr5 7140606 7140891 -192489259 - MLT1C LTR MaLR 0 467 167 3634 204 44 47 chr5 7141534 7142450 -192487700 - L1MC3 LINE L1 0 7785 6873 1686 195 16 55 chr5 7142450 7142696 -192487454 - MLT1A1 LTR MaLR 0 365 138 1562 221 106 81 chr5 7142696 7143403 -192486747 - LTR8A LTR ERV1 -2 725 1 1686 195 16 55 chr5 7143403 7143536 -192486614 - MLT1A1 LTR MaLR -227 138 1 1170 203 68 17 chr5 7143536 7143831 -192486319 - L1MC3 LINE L1 -936 6849 6540 2948 145 134 0 chr5 7143867 7144391 -192485759 - LTR29 LTR ERV1 -28 594 1 5127 191 55 6 chr5 7144391 7145437 -192484713 - L1MC3 LINE L1 -1242 6543 5446 2738 29 0 0 chr5 7145440 7145751 -192484399 - AluYa5 SINE Alu 0 311 1 226 161 54 54 chr5 7146710 7146766 -192483384 - MLT1-int LTR MaLR -1311 60 5 245 315 69 22 chr5 7147187 7147377 -192482773 - MIR3 SINE MIR -46 216 15 2390 251 63 12 chr5 7148785 7149390 -192480760 - MER92B LTR ERV1 0 636 1 277 297 78 16 chr5 7150651 7150779 -192479371 - L1MDa LINE L1 -4840 1700 1565 2116 229 109 24 chr5 7150931 7151599 -192478551 + MER50 LTR ERV1 10 734 0 2836 189 34 11 chr5 7152001 7152055 -192478095 + MER44D DNA MER2_type 2 53 -2434 4202 97 51 14 chr5 7152055 7152643 -192477507 - MER4B LTR ERV1 0 610 1 2836 189 34 11 chr5 7152643 7153123 -192477027 + MER44D DNA MER2_type 53 603 -2 217 0 0 0 chr5 7153849 7153873 -192476277 + (TTTTG)n Simple_repeat Simple_repeat 2 60 0 2237 81 0 11 chr5 7153873 7154156 -192475994 - AluSc SINE Alu -29 280 1 1324 206 4 0 chr5 7155279 7155517 -192474633 - AluJb SINE Alu -73 239 1 622 300 65 20 chr5 7156372 7156619 -192473531 + LTR16B LTR ERVL 196 453 -11 284 312 76 62 chr5 7156946 7157683 -192472467 + L2 LINE L2 2303 3051 -221 342 0 0 0 chr5 7157734 7157772 -192472378 + (TG)n Simple_repeat Simple_repeat 2 39 0 1809 109 0 115 chr5 7157772 7158094 -192472056 - AluSx SINE Alu -27 285 1 399 236 6 51 chr5 7158772 7158950 -192471200 + (TATATG)n Simple_repeat Simple_repeat 4 173 0 1137 257 152 26 chr5 7159438 7159780 -192470370 + MLT1E LTR MaLR 75 459 -134 547 157 0 0 chr5 7159913 7159996 -192470154 + AluS SINE Alu 2 84 -229 3526 131 28 30 chr5 7160796 7161397 -192468753 + MER4A LTR ERV1 1 600 0 21 57 0 0 chr5 7161526 7161561 -192468589 + AT_rich Low_complexity Low_complexity 1 35 0 279 232 0 0 chr5 7162106 7162162 -192467988 + LTR33 LTR ERVL 77 132 -389 2657 110 3 3 chr5 7162316 7162680 -192467470 + THE1B LTR MaLR 1 364 0 246 261 33 11 chr5 7162710 7162802 -192467348 + LTR33 LTR ERVL 397 490 -31 218 342 7 40 chr5 7162804 7162953 -192467197 - MIR SINE MIR -59 203 60 258 325 162 0 chr5 7163677 7163794 -192466356 - L2 LINE L2 -15 3257 3122 2502 91 0 0 chr5 7165389 7165697 -192464453 + AluSx SINE Alu 1 308 -4 784 308 115 16 chr5 7166067 7166512 -192463638 + LTR33 LTR ERVL 24 512 -9 1584 206 41 15 chr5 7168028 7168367 -192461783 - MER7A DNA MER2_type 0 346 1 234 91 0 0 chr5 7168553 7168586 -192461564 + (TA)n Simple_repeat Simple_repeat 2 34 0 180 0 0 0 chr5 7168639 7168659 -192461491 + (TA)n Simple_repeat Simple_repeat 1 20 0 * 480 48 0 0 chr5 7168658 7168721 -192461429 + (GA)n Simple_repeat Simple_repeat 2 64 0 1527 234 105 18 chr5 7170484 7170942 -192459208 - MLT1D LTR MaLR 0 505 8 409 255 56 87 chr5 7170968 7171199 -192458951 + MLT1K LTR MaLR 328 551 -37 23 0 0 0 chr5 7171854 7171877 -192458273 + AT_rich Low_complexity Low_complexity 1 23 0 2140 117 0 0 chr5 7172490 7172817 -192457333 + AluSx SINE Alu 1 327 0 224 269 10 0 chr5 7173012 7173116 -192457034 + (TG)n Simple_repeat Simple_repeat 2 106 0 841 239 50 18 chr5 7173464 7173682 -192456468 - MLT1B LTR MaLR 0 390 166 507 157 21 21 chr5 7173684 7173824 -192456326 + CT-rich Low_complexity Low_complexity 1 140 0 1053 140 0 0 chr5 7173830 7174008 -192456142 + (TTC)n Simple_repeat Simple_repeat 3 180 0 236 267 0 0 chr5 7174017 7174077 -192456073 - FLAM SINE Alu -1 132 73 * 764 224 11 38 chr5 7174061 7174244 -192455906 - MLT1B LTR MaLR -211 179 2 2082 136 19 45 chr5 7174818 7175192 -192454958 + THE1B LTR MaLR 1 364 0 303 311 52 15 chr5 7175928 7176063 -192454087 + MIR SINE MIR 25 164 -98 233 263 84 66 chr5 7176154 7176367 -192453783 + L1MC1 LINE L1 3895 4111 -2035 383 205 18 35 chr5 7177134 7177369 -192452781 + (TATAA)n Simple_repeat Simple_repeat 1 230 0 228 217 29 0 chr5 7177342 7177411 -192452739 + T-rich Low_complexity Low_complexity 1 71 0 * 23 54 0 0 chr5 7177440 7177477 -192452673 + AT_rich Low_complexity Low_complexity 1 37 0 5354 203 15 16 chr5 7177672 7178675 -192451475 + L1MC1 LINE L1 4819 5821 -512 432 37 0 0 chr5 7178675 7178729 -192451421 + (CA)n Simple_repeat Simple_repeat 1 54 0 5354 203 15 16 chr5 7178729 7178877 -192451273 + L1MC1 LINE L1 5821 5968 -365 2022 152 3 0 chr5 7178877 7179186 -192450964 + AluSx SINE Alu 1 310 -2 5354 203 15 16 chr5 7179186 7179550 -192450600 + L1MC1 LINE L1 5968 6333 0 541 240 25 75 chr5 7179634 7179757 -192450393 + MIR SINE MIR 73 184 -78 2115 128 0 16 chr5 7179757 7180061 -192450089 - AluSx SINE Alu -13 299 1 541 240 25 75 chr5 7180061 7180137 -192450013 + MIR SINE MIR 184 262 0 2051 128 25 0 chr5 7180945 7181226 -192448924 + AluSg SINE Alu 5 292 -18 210 118 0 0 chr5 7181697 7181731 -192448419 + (CATATA)n Simple_repeat Simple_repeat 5 38 0 263 191 176 69 chr5 7181732 7181863 -192448287 + L1ME4a LINE L1 5947 6091 -30 185 105 0 26 chr5 7182494 7182532 -192447618 + (TA)n Simple_repeat Simple_repeat 1 37 0 1473 91 21 45 chr5 7182671 7182914 -192447236 + L1PA5 LINE L1 5918 6154 0 186 189 0 0 chr5 7184256 7184293 -192445857 + (CAT)n Simple_repeat Simple_repeat 2 38 0 236 184 207 23 chr5 7184465 7184552 -192445598 + MIR SINE MIR 52 154 -108 816 271 45 16 chr5 7185473 7185842 -192444308 + L1ME LINE L1 498 873 -5197 680 191 58 143 chr5 7187883 7188027 -192442123 - MLT1B LTR MaLR -122 268 160 2192 129 36 33 chr5 7188027 7188390 -192441760 + THE1B LTR MaLR 1 364 0 680 191 58 143 chr5 7188390 7188538 -192441612 - MLT1B LTR MaLR -230 160 1 294 176 22 11 chr5 7189118 7189209 -192440941 + (CA)n Simple_repeat Simple_repeat 2 93 0 508 303 59 17 chr5 7189572 7189810 -192440340 - LTR16C LTR ERVL -94 397 150 1297 163 0 5 chr5 7189889 7190098 -192440052 + AluJb SINE Alu 86 293 -19 216 135 0 0 chr5 7190112 7190149 -192440001 + (CA)n Simple_repeat Simple_repeat 2 38 0 3103 140 45 18 chr5 7190384 7190935 -192439215 + L1MB3 LINE L1 5618 6183 0 198 305 17 0 chr5 7191862 7191921 -192438229 + L2 LINE L2 3249 3308 -5 1929 104 107 7 chr5 7195202 7195482 -192434668 + AluSx SINE Alu 1 308 -4 766 235 6 0 chr5 7196364 7196526 -192433624 - MLT1E2 LTR MaLR -6 499 337 1152 235 34 53 chr5 7196576 7196954 -192433196 + MLT1C LTR MaLR 97 467 0 1026 226 65 62 chr5 7196971 7197307 -192432843 - MLT1E2 LTR MaLR -289 337 1 199 307 150 13 chr5 7197710 7197863 -192432287 - L2 LINE L2 -222 3050 2877 673 122 9 0 chr5 7198086 7198193 -192431957 + MER50 LTR ERV1 497 604 -130 907 249 128 21 chr5 7200651 7200980 -192429170 - MLT1D LTR MaLR -6 499 136 599 148 9 19 chr5 7201100 7201208 -192428942 - MLT2C2 LTR ERVL -357 107 1 1441 240 58 17 chr5 7201962 7202379 -192427771 + MLT1C LTR MaLR 1 434 -33 1332 115 0 6 chr5 7202391 7202573 -192427577 - AluSq SINE Alu -132 181 1 2078 119 0 7 chr5 7203361 7203654 -192426496 + AluSx SINE Alu 1 291 -21 23 54 0 0 chr5 7204174 7204211 -192425939 + AT_rich Low_complexity Low_complexity 1 37 0 309 206 39 59 chr5 7204225 7204327 -192425823 + MIR3 SINE MIR 86 185 -23 456 339 5 16 chr5 7205140 7205332 -192424818 - MIR SINE MIR -29 233 44 287 269 0 0 chr5 7206002 7206069 -192424081 + CT-rich Low_complexity Low_complexity 2 68 0 703 152 51 0 chr5 7207881 7208019 -192422131 + L1MA5 LINE L1 6155 6299 -1 3106 141 65 6 chr5 7208162 7208652 -192421498 - LTR44 LTR ERV1 0 519 1 3097 77 8 2 chr5 7208819 7209221 -192420929 + MLT2A1 LTR ERVL 1 404 -40 648 173 0 0 chr5 7209232 7209382 -192420768 + (TA)n Simple_repeat Simple_repeat 1 150 0 231 140 0 88 chr5 7209405 7209462 -192420688 + LTR66 LTR ERVL 398 449 -161 * 327 98 59 0 chr5 7209445 7209496 -192420654 + MLT2A1 LTR ERVL 391 444 0 273 119 0 0 chr5 7209973 7210015 -192420135 + (TG)n Simple_repeat Simple_repeat 1 42 0 279 54 0 0 chr5 7210474 7210511 -192419639 + (TG)n Simple_repeat Simple_repeat 1 37 0 1555 113 8 8 chr5 7210718 7210957 -192419193 - MER57B LTR ERV1 0 434 196 24 0 0 0 chr5 7211227 7211251 -192418899 + AT_rich Low_complexity Low_complexity 1 24 0 1399 122 15 5 chr5 7211293 7211498 -192418652 - MER57B LTR ERV1 -227 207 1 1746 195 57 3 chr5 7211708 7212026 -192418124 + MLT1A1 LTR MaLR 9 343 -22 594 144 33 0 chr5 7212193 7212283 -192417867 + FLAM_A SINE Alu 32 124 -18 2338 106 6 3 chr5 7213390 7213701 -192416449 - AluSx SINE Alu 0 312 1 252 100 0 0 chr5 7214948 7214988 -192415162 + (TA)n Simple_repeat Simple_repeat 2 41 0 374 250 23 0 chr5 7214992 7215080 -192415070 + L1MC4 LINE L1 6614 6703 -1339 247 198 0 62 chr5 7215086 7215182 -192414968 + L1MC4 LINE L1 6614 6703 -1339 392 232 21 42 chr5 7215184 7215344 -192414806 + L1MC3 LINE L1 6526 6703 -1139 385 184 0 82 chr5 7215326 7215424 -192414726 + L1MC4 LINE L1 6614 6703 -1339 * 210 171 0 0 chr5 7215428 7215469 -192414681 + (TA)n Simple_repeat Simple_repeat 2 42 0 2601 200 16 40 chr5 7215486 7215522 -192414628 - MLT2B3 LTR ERVL -15 539 504 954 46 46 17 chr5 7215522 7215697 -192414453 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 2601 200 16 40 chr5 7215697 7216204 -192413946 - MLT2B3 LTR ERVL -50 504 9 229 297 33 11 chr5 7217998 7218089 -192412061 + MLT1A1 LTR MaLR 457 549 0 23 0 0 0 chr5 7218462 7218485 -192411665 + AT_rich Low_complexity Low_complexity 1 23 0 306 0 0 0 chr5 7219035 7219069 -192411081 + (TG)n Simple_repeat Simple_repeat 1 34 0 201 178 22 0 chr5 7220822 7220867 -192409283 - L2 LINE L2 0 3313 3268 1664 184 23 26 chr5 7221471 7221781 -192408369 - AluJo SINE Alu -3 309 1 21 36 0 0 chr5 7223974 7224002 -192406148 + AT_rich Low_complexity Low_complexity 1 28 0 1609 135 54 0 chr5 7224937 7225196 -192404954 + AluSx SINE Alu 40 312 0 298 294 28 18 chr5 7225292 7225401 -192404749 - MER94 DNA DNA -22 112 3 323 118 20 0 chr5 7225495 7225546 -192404604 + MLT1A1 LTR MaLR 1 52 -313 254 250 7 0 chr5 7226231 7226383 -192403767 + (TG)n Simple_repeat Simple_repeat 2 154 0 24 0 0 0 chr5 7227660 7227684 -192402466 + AT_rich Low_complexity Low_complexity 1 24 0 1114 219 16 27 chr5 7228067 7228323 -192401827 - L1MB5 LINE L1 -297 5877 5625 * 1164 221 31 7 chr5 7228322 7228627 -192401523 + L1MB5 LINE L1 5867 6180 0 12608 176 22 8 chr5 7228899 7230244 -192399906 + L1PB3 LINE L1 2633 3957 -2197 1962 138 10 3 chr5 7230244 7230540 -192399610 + AluSg SINE Alu 1 298 -12 12608 176 22 8 chr5 7230540 7230945 -192399205 + L1PB3 LINE L1 3957 4355 -1799 230 29 59 0 chr5 7230945 7230979 -192399171 + (TAAAA)n Simple_repeat Simple_repeat 2 37 0 12608 176 22 8 chr5 7230979 7232699 -192397451 + L1PB3 LINE L1 4355 6154 0 1798 138 64 3 chr5 7233981 7234264 -192395886 + AluJb SINE Alu 1 300 -12 274 275 58 7 chr5 7234503 7234697 -192395453 + (TCTA)n Simple_repeat Simple_repeat 1 203 0 1369 214 206 3 chr5 7234814 7235192 -192394958 + MLT2B2 LTR ERVL 1 455 -60 345 24 0 0 chr5 7235195 7235237 -192394913 + (CA)n Simple_repeat Simple_repeat 2 43 0 270 285 51 15 chr5 7235252 7235389 -192394761 + MIR SINE MIR 81 222 -40 36 53 0 0 chr5 7235522 7235579 -192394571 + AT_rich Low_complexity Low_complexity 1 57 0 1627 90 36 0 chr5 7235708 7235930 -192394220 - L1PA10 LINE L1 -4 6164 5935 33 56 0 0 chr5 7236063 7236117 -192394033 + AT_rich Low_complexity Low_complexity 1 54 0 21 57 0 0 chr5 7236148 7236183 -192393967 + AT_rich Low_complexity Low_complexity 1 35 0 2470 124 3 0 chr5 7237546 7237893 -192392257 + L1PA13 LINE L1 5802 6149 -14 3080 169 78 31 chr5 7238586 7238937 -192391213 - MER7C DNA MER2_type -2426 602 212 188 67 33 0 chr5 7238937 7238967 -192391183 + (TGAG)n Simple_repeat Simple_repeat 4 34 0 3080 169 78 31 chr5 7238967 7239190 -192390960 - MER7C DNA MER2_type -2816 212 1 512 307 88 47 chr5 7239191 7239614 -192390536 - LTR33 LTR ERVL -77 444 5 818 163 43 22 chr5 7239997 7240181 -192389969 + MER53 DNA DNA 2 189 0 1200 293 84 42 chr5 7240407 7240640 -192389510 - L2 LINE L2 0 3313 3091 2244 116 0 0 chr5 7240640 7240943 -192389207 - AluSq SINE Alu 0 313 11 1200 293 84 42 chr5 7240943 7241786 -192388364 - L2 LINE L2 -222 3091 2201 1204 275 44 6 chr5 7241792 7242112 -192388038 - LTR16A LTR ERVL -3 447 116 1910 181 3 0 chr5 7242223 7242532 -192387618 - AluSx SINE Alu -2 310 1 2304 109 7 0 chr5 7242550 7242854 -192387296 - AluSg SINE Alu -4 306 1 386 340 42 50 chr5 7242868 7243130 -192387020 + L2 LINE L2 1148 1407 -1907 3497 229 95 19 chr5 7244438 7245628 -192384522 - L1M4 LINE L1 -821 5325 4045 418 303 152 28 chr5 7252972 7253262 -192376888 - L2 LINE L2 -945 2369 2044 372 278 12 29 chr5 7253459 7253632 -192376518 + (CATG)n Simple_repeat Simple_repeat 2 171 0 331 240 10 83 chr5 7253660 7253852 -192376298 + (CATG)n Simple_repeat Simple_repeat 2 179 0 242 315 89 41 chr5 7254527 7254819 -192375331 + L1MC/D LINE L1 4474 4779 -1367 283 285 73 28 chr5 7255289 7255468 -192374682 + L1MC/D LINE L1 5314 5500 -2308 963 206 77 111 chr5 7255826 7256278 -192373872 + MLT1D LTR MaLR 69 505 0 239 189 38 0 chr5 7256735 7256788 -192373362 - MLT1K LTR MaLR -20 568 514 459 131 0 30 chr5 7257083 7257182 -192372968 + (GGAA)n Simple_repeat Simple_repeat 2 97 0 24 0 0 0 chr5 7257574 7257598 -192372552 + AT_rich Low_complexity Low_complexity 1 24 0 360 64 0 0 chr5 7257631 7257678 -192372472 + (TA)n Simple_repeat Simple_repeat 1 47 0 1944 48 0 36 chr5 7257678 7257921 -192372229 - AluY SINE Alu -14 297 64 409 276 92 54 chr5 7258078 7258804 -192371346 - L1MEd LINE L1 -4613 1516 771 654 328 131 30 chr5 7259426 7259953 -192370197 + L2 LINE L2 2464 3049 -223 2191 78 14 4 chr5 7260605 7260886 -192369264 - AluSp SINE Alu -29 284 1 1203 130 27 0 chr5 7262054 7262239 -192367911 - L1PA15 LINE L1 -21 6144 5955 11639 214 17 30 chr5 7262239 7263774 -192366376 - L1P LINE L1 -913 5233 3748 1968 130 0 14 chr5 7263774 7264110 -192366040 - AluY SINE Alu 0 332 1 11639 214 17 30 chr5 7264110 7265342 -192364808 - L1P LINE L1 -2398 3748 2501 4857 216 23 15 chr5 7265345 7267166 -192362984 + L1P LINE L1 1326 3159 -3638 249 180 0 0 chr5 7267247 7267297 -192362853 + (CATA)n Simple_repeat Simple_repeat 2 51 0 643 294 150 25 chr5 7267923 7268720 -192361430 - L2 LINE L2 0 3313 2360 23 0 0 0 chr5 7270373 7270396 -192359754 + AT_rich Low_complexity Low_complexity 1 23 0 2281 108 0 0 chr5 7270529 7270834 -192359316 - AluSq SINE Alu -8 305 1 250 318 55 46 chr5 7271382 7271569 -192358581 - MIR SINE MIR -67 141 9 180 286 71 12 chr5 7273343 7273427 -192356723 - MIR SINE MIR -77 185 97 269 218 0 69 chr5 7273474 7273561 -192356589 + L1MC4 LINE L1 6641 6721 -1321 217 135 27 0 chr5 7273789 7273826 -192356324 + GA-rich Low_complexity Low_complexity 2 39 0 21 57 0 0 chr5 7274085 7274120 -192356030 + AT_rich Low_complexity Low_complexity 1 35 0 459 270 149 66 chr5 7274669 7275151 -192354999 - LTR33A LTR ERVL -1 522 1 259 179 18 0 chr5 7275940 7275996 -192354154 - LTR33A LTR ERVL 0 523 467 560 77 188 51 chr5 7276391 7276409 -192353741 - L1MA7 LINE L1 -3 6288 6274 2056 132 48 38 chr5 7276409 7276780 -192353370 + THE1C LTR MaLR 1 375 0 560 77 188 51 chr5 7276780 7276878 -192353272 - L1MA7 LINE L1 -17 6274 6156 485 333 101 16 chr5 7276883 7277201 -192352949 + MLT1L LTR MaLR 227 571 -44 402 21 0 0 chr5 7277864 7277911 -192352239 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 1805 142 0 0 chr5 7277916 7278169 -192351981 - AluSx SINE Alu -59 253 1 1887 129 30 23 chr5 7278169 7278472 -192351678 - AluSx SINE Alu -7 305 1 189 375 116 0 chr5 7278516 7278628 -192351522 - L2 LINE L2 -22 3250 3126 2411 169 0 5 chr5 7279124 7279491 -192350659 + MLT1A1 LTR MaLR 1 365 0 2982 199 90 55 chr5 7279702 7280500 -192349650 - LTR1B LTR ERV1 0 826 1 304 130 0 0 chr5 7280885 7280931 -192349219 + MADE1 DNA Mariner 35 80 0 974 258 97 52 chr5 7281207 7281645 -192348505 - MLT1C LTR MaLR 0 467 5 1586 199 38 0 chr5 7281713 7281882 -192348268 - AluJo SINE Alu -14 298 112 198 0 0 0 chr5 7281882 7281904 -192348246 + (TTG)n Simple_repeat Simple_repeat 3 24 0 1586 199 38 0 chr5 7281904 7282021 -192348129 - AluJo SINE Alu -200 112 1 202 264 128 111 chr5 7283460 7283813 -192346337 + L2 LINE L2 2560 2918 -396 587 207 8 0 chr5 7284135 7284256 -192345894 + MSTD LTR MaLR 275 396 0 244 263 132 9 chr5 7284258 7284372 -192345778 - HAL1 LINE L1 -1104 1403 1276 1251 246 153 25 chr5 7284387 7284826 -192345324 - MLT1D LTR MaLR -8 497 3 251 242 207 60 chr5 7284930 7285171 -192344979 - HAL1 LINE L1 -1334 1173 874 195 42 0 0 chr5 7285171 7285195 -192344955 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 251 242 207 60 chr5 7285195 7285267 -192344883 - HAL1 LINE L1 -1633 874 814 2034 39 0 0 chr5 7285443 7285673 -192344477 + L1PA5 LINE L1 5922 6151 -3 187 348 130 36 chr5 7286154 7286292 -192343858 + L2 LINE L2 3118 3268 -4 670 120 0 0 chr5 7286448 7286548 -192343602 + AluSg/x SINE Alu 208 307 -5 469 113 0 0 chr5 7287530 7287592 -192342558 - AluJ/FLAM SINE Alu -250 62 1 1510 267 100 28 chr5 7287606 7288542 -192341608 - L1MEd LINE L1 -3013 3116 2113 360 64 0 0 chr5 7288894 7288941 -192341209 + (TA)n Simple_repeat Simple_repeat 1 47 0 2036 47 0 28 chr5 7288941 7289196 -192340954 - AluY SINE Alu 0 311 64 421 281 90 53 chr5 7289352 7290092 -192340058 - L1MEd LINE L1 -4613 1516 756 478 211 8 29 chr5 7291563 7291812 -192338338 + CT-rich Low_complexity Low_complexity 1 243 0 559 163 11 0 chr5 7292158 7292250 -192337900 - MLT2B3 LTR ERVL -227 327 235 326 220 10 0 chr5 7292264 7292364 -192337786 + GA-rich Low_complexity Low_complexity 2 102 0 1370 170 13 9 chr5 7292364 7292594 -192337556 - MLT2B3 LTR ERVL -323 231 1 353 182 26 0 chr5 7292922 7292999 -192337151 + MER116 DNA Mariner 1 79 -1 2070 115 4 4 chr5 7294212 7294304 -192335846 - AluSc SINE Alu 0 395 304 198 0 0 0 chr5 7294304 7294326 -192335824 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2070 115 4 4 chr5 7294326 7294607 -192335543 - AluSc SINE Alu -90 305 1 358 299 0 9 chr5 7295373 7295480 -192334670 + MIR3 SINE MIR 87 192 -16 196 250 90 20 chr5 7296192 7296292 -192333858 + L2 LINE L2 3045 3151 -162 183 245 20 0 chr5 7296485 7296534 -192333616 + L3b LINE CR1 1306 1355 -228 567 299 127 21 chr5 7297232 7297523 -192332627 + L2 LINE L2 2992 3313 0 272 217 0 12 chr5 7301787 7301870 -192328280 + CT-rich Low_complexity Low_complexity 4 85 0 1952 157 7 0 chr5 7305335 7305640 -192324510 + AluSx SINE Alu 1 307 -5 543 301 36 18 chr5 7306198 7306417 -192323733 + LTR16C LTR ERVL 269 491 0 223 239 22 43 chr5 7306501 7306593 -192323557 + (TCTA)n Simple_repeat Simple_repeat 4 93 0 360 0 0 0 chr5 7307433 7307473 -192322677 + (TG)n Simple_repeat Simple_repeat 2 41 0 327 289 67 21 chr5 7308333 7308527 -192321623 + LTR33 LTR ERVL 15 217 -304 1903 153 20 0 chr5 7309535 7309830 -192320320 - AluSx SINE Alu -11 301 1 182 269 60 104 chr5 7310438 7310572 -192319578 - L2 LINE L2 -436 2878 2751 2418 75 0 0 chr5 7310888 7311180 -192318970 + AluY SINE Alu 1 292 -19 3783 119 6 24 chr5 7311342 7311879 -192318271 + MER1A DNA MER1_type 1 527 0 27 81 0 0 chr5 7312042 7312104 -192318046 + AT_rich Low_complexity Low_complexity 1 62 0 214 191 0 0 chr5 7312420 7312462 -192317688 + (TTA)n Simple_repeat Simple_repeat 1 42 0 808 287 69 28 chr5 7312641 7312684 -192317466 + MLT1I LTR MaLR 2 42 -367 189 0 0 0 chr5 7312684 7312705 -192317445 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 808 287 69 28 chr5 7312705 7313051 -192317099 + MLT1I LTR MaLR 42 407 -2 282 73 0 0 chr5 7313158 7313199 -192316951 + (TTCA)n Simple_repeat Simple_repeat 3 43 0 393 291 89 58 chr5 7313297 7313610 -192316540 + L1ME4a LINE L1 5625 5947 -174 24 67 0 0 chr5 7313711 7313756 -192316394 + AT_rich Low_complexity Low_complexity 1 45 0 321 303 35 64 chr5 7314397 7314711 -192315439 + L1MC/D LINE L1 3849 4153 -1993 210 211 0 28 chr5 7314882 7314953 -192315197 + (TAAA)n Simple_repeat Simple_repeat 2 70 0 188 176 28 28 chr5 7314956 7315064 -192315086 + (TTATA)n Simple_repeat Simple_repeat 5 112 0 244 326 82 31 chr5 7315153 7315444 -192314706 + L1MC/D LINE L1 4474 4779 -1367 633 329 74 18 chr5 7315914 7316358 -192313792 + L1MC/D LINE L1 5314 5782 -2026 26 30 0 0 chr5 7316761 7316794 -192313356 + AT_rich Low_complexity Low_complexity 1 33 0 2784 105 13 8 chr5 7317362 7317735 -192312415 + THE1C LTR MaLR 1 375 0 243 226 204 11 chr5 7318492 7318585 -192311565 + L2 LINE L2 3201 3311 -2 270 0 0 0 chr5 7318653 7318683 -192311467 + (TG)n Simple_repeat Simple_repeat 2 31 0 2753 115 0 10 chr5 7319861 7320245 -192309905 + MLT2A2 LTR ERVL 1 380 -73 324 167 12 24 chr5 7320245 7320329 -192309821 + (TATATG)n Simple_repeat Simple_repeat 5 87 0 408 19 38 0 chr5 7320329 7320382 -192309768 + MLT2A2 LTR ERVL 399 453 0 265 319 88 0 chr5 7320973 7321064 -192309086 - MLT1I LTR MaLR -173 236 138 1565 308 108 41 chr5 7321333 7322317 -192307833 + L2 LINE L2 1971 3020 -293 1581 251 52 34 chr5 7322318 7322876 -192307274 - L1MEc LINE L1 -3322 2893 2326 1411 111 0 5 chr5 7322876 7323074 -192307076 - AluSg/x SINE Alu 0 310 114 2396 64 3 22 chr5 7323202 7323513 -192306637 + AluY SINE Alu 1 305 -6 1499 150 75 4 chr5 7323520 7323773 -192306377 + AluSx SINE Alu 1 271 -41 502 167 0 12 chr5 7323789 7323873 -192306277 + AluSg/x SINE Alu 210 292 -20 735 274 89 35 chr5 7323877 7324395 -192305755 - L1MEc LINE L1 -4536 1860 1315 1751 149 0 31 chr5 7324406 7324757 -192305393 - AluSg SINE Alu 0 342 1 577 239 28 35 chr5 7324821 7324963 -192305187 - L1MEc LINE L1 -5825 571 431 375 234 16 81 chr5 7325085 7325209 -192304941 + L2 LINE L2 3198 3313 0 291 311 82 67 chr5 7328420 7328690 -192301460 - L3 LINE CR1 -701 876 603 21 0 0 0 chr5 7328959 7328980 -192301170 + AT_rich Low_complexity Low_complexity 1 21 0 1329 199 17 24 chr5 7329702 7329999 -192300151 + AluJo SINE Alu 1 295 -17 1166 247 150 71 chr5 7331360 7331934 -192298216 - MLT1E2 LTR MaLR -2 624 6 197 289 96 19 chr5 7332554 7332658 -192297492 + L3 LINE CR1 1465 1576 -1 327 177 0 0 chr5 7334219 7334281 -192295869 + GA-rich Low_complexity Low_complexity 2 63 0 559 203 27 27 chr5 7335160 7335308 -192294842 - LTR67 LTR ERVL -3 554 407 180 0 0 0 chr5 7335598 7335618 -192294532 + (A)n Simple_repeat Simple_repeat 1 20 0 218 311 0 0 chr5 7335644 7335689 -192294461 + L2 LINE L2 3139 3183 -89 282 189 11 67 chr5 7336748 7336838 -192293312 + (TCTA)n Simple_repeat Simple_repeat 1 85 0 257 277 71 45 chr5 7336975 7337130 -192293020 - MIR3 SINE MIR 0 208 50 1526 194 0 7 chr5 7338699 7339007 -192291143 - AluJb SINE Alu 0 306 1 306 173 29 0 chr5 7340449 7340598 -192289552 + (TA)n Simple_repeat Simple_repeat 1 153 0 185 0 40 0 chr5 7342111 7342136 -192288014 + (TTTC)n Simple_repeat Simple_repeat 2 27 0 2298 78 3 3 chr5 7342153 7342437 -192287713 - AluSp SINE Alu -29 284 1 2305 82 0 0 chr5 7343235 7343516 -192286634 + AluY SINE Alu 1 281 -30 225 65 0 0 chr5 7343519 7343550 -192286600 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 703 244 153 41 chr5 7345285 7345444 -192284706 + MLT1F1 LTR MaLR 2 142 -400 1757 142 36 33 chr5 7345444 7345775 -192284375 + L1MA4A LINE L1 5966 6297 -6 703 244 153 41 chr5 7345775 7346113 -192284037 + MLT1F1 LTR MaLR 142 541 -1 377 274 17 28 chr5 7346528 7346707 -192283443 + (CATG)n Simple_repeat Simple_repeat 2 178 0 1187 331 141 14 chr5 7346900 7347568 -192282582 + L2 LINE L2 2044 2796 -518 4384 112 8 16 chr5 7348213 7348830 -192281320 + MER51A LTR ERV1 23 634 0 225 172 78 16 chr5 7350060 7350124 -192280026 - LTR13 LTR ERVK -292 715 648 903 205 58 99 chr5 7350457 7350534 -192279616 - L1MC5 LINE L1 -725 7236 7157 2486 78 0 0 chr5 7350534 7350840 -192279310 + AluY SINE Alu 1 306 -5 903 205 58 99 chr5 7350840 7351157 -192278993 - L1MC5 LINE L1 -804 7157 6858 468 277 15 0 chr5 7351239 7351369 -192278781 - L1MC5 LINE L1 -1132 6829 6698 243 223 62 77 chr5 7351368 7351498 -192278652 - HAL1 LINE L1 -159 2348 2221 * 1323 154 0 5 chr5 7351578 7351792 -192278358 - AluSg/x SINE Alu -13 297 85 1671 266 196 42 chr5 7351800 7353377 -192276773 - HAL1 LINE L1 -438 2069 250 186 298 12 48 chr5 7353714 7353798 -192276352 + L2 LINE L2 3233 3313 0 588 157 50 41 chr5 7354354 7354475 -192275675 + MLT1A2 LTR MaLR 199 320 -54 1707 236 25 9 chr5 7354630 7355021 -192275129 + MSTD LTR MaLR 9 396 0 271 273 30 20 chr5 7355584 7355683 -192274467 + L3 LINE CR1 1059 1158 -419 24 32 0 0 chr5 7356587 7356618 -192273532 + AT_rich Low_complexity Low_complexity 1 31 0 10175 227 69 31 chr5 7360200 7364585 -192265565 - L1MB8 LINE L1 -12 6977 2471 366 107 0 0 chr5 7364780 7364836 -192265314 + (TG)n Simple_repeat Simple_repeat 2 57 0 5571 236 72 38 chr5 7364839 7365362 -192264788 - L1MB8 LINE L1 -4607 2352 1848 2201 104 3 0 chr5 7365362 7365659 -192264491 - AluSc SINE Alu -11 298 1 5571 236 72 38 chr5 7365659 7366705 -192263445 - L1MB8 LINE L1 -5111 1848 683 315 0 0 0 chr5 7366705 7366740 -192263410 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 5571 236 72 38 chr5 7366740 7367434 -192262716 - L1MB8 LINE L1 -6276 683 14 345 248 90 28 chr5 7367859 7368004 -192262146 - MIR SINE MIR -48 214 61 2173 143 38 41 chr5 7368043 7368408 -192261742 + THE1B LTR MaLR 1 364 0 438 203 58 0 chr5 7370214 7370546 -192259604 + CT-rich Low_complexity Low_complexity 1 351 0 410 150 0 0 chr5 7370651 7370711 -192259439 + THE1B LTR MaLR 305 364 0 * 1240 161 187 22 chr5 7370711 7370973 -192259177 - MSTA LTR MaLR -122 306 1 185 283 0 0 chr5 7370998 7371044 -192259106 + L2 LINE L2 3210 3255 -17 195 42 0 0 chr5 7371044 7371068 -192259082 + (TTA)n Simple_repeat Simple_repeat 1 24 0 555 117 0 36 chr5 7371291 7371402 -192258748 + (TTCC)n Simple_repeat Simple_repeat 2 108 0 314 182 0 0 chr5 7371705 7371760 -192258390 + MLT1K LTR MaLR 514 568 -20 1005 205 75 110 chr5 7372233 7372686 -192257464 - MLT1D LTR MaLR 0 505 69 295 291 51 17 chr5 7372954 7373173 -192256977 + L1M4 LINE L1 4234 4459 -1687 183 315 62 23 chr5 7373409 7373539 -192256611 + MIR SINE MIR 14 148 -114 21 36 0 0 chr5 7373716 7373744 -192256406 + AT_rich Low_complexity Low_complexity 1 28 0 1084 191 57 30 chr5 7374165 7374395 -192255755 - MER46A DNA MER2_type 0 236 1 1976 195 61 127 chr5 7374652 7375395 -192254755 + LTR8A LTR ERV1 34 727 0 600 295 62 62 chr5 7375426 7375830 -192254320 + L2 LINE L2 2809 3212 -101 417 291 35 62 chr5 7376037 7376295 -192253855 + LTR16B LTR ERVL 214 464 0 2079 170 101 0 chr5 7377506 7377894 -192252256 - MSTA LTR MaLR 0 428 2 1489 242 13 32 chr5 7378039 7378411 -192251739 - MLT1A1 LTR MaLR 0 365 1 22 0 0 0 chr5 7379053 7379075 -192251075 + AT_rich Low_complexity Low_complexity 1 22 0 1429 241 51 8 chr5 7380704 7381078 -192249072 + MLT1C LTR MaLR 3 392 -75 226 232 63 11 chr5 7381483 7381578 -192248572 + CT-rich Low_complexity Low_complexity 1 100 0 253 158 63 0 chr5 7381582 7381677 -192248473 + (CCCTG)n Simple_repeat Simple_repeat 2 102 0 508 107 63 60 chr5 7381710 7382146 -192248004 + CT-rich Low_complexity Low_complexity 1 437 0 1046 254 70 53 chr5 7383427 7383786 -192246364 + MLT1A1 LTR MaLR 1 365 0 2453 165 19 36 chr5 7383979 7384521 -192245629 - LTR27 LTR ERV1 0 501 3 182 330 124 0 chr5 7384551 7384648 -192245502 + MIR SINE MIR 38 146 -62 2784 153 39 37 chr5 7384680 7385032 -192245118 - L1MB3 LINE L1 -36 6147 5792 2223 115 0 0 chr5 7385032 7385336 -192244814 + AluSc SINE Alu 1 304 -5 2784 153 39 37 chr5 7385336 7385524 -192244626 - L1MB3 LINE L1 -391 5792 5606 229 323 96 0 chr5 7386125 7386323 -192243827 + L1M4 LINE L1 3762 3978 -2168 555 271 0 0 chr5 7386361 7386483 -192243667 + MIR SINE MIR 12 133 -129 1937 153 134 28 chr5 7386504 7386628 -192243522 - MSTA LTR MaLR 0 428 319 1902 144 76 51 chr5 7386628 7386983 -192243167 + THE1B LTR MaLR 1 364 0 1937 153 134 28 chr5 7386983 7387245 -192242905 - MSTA LTR MaLR -109 319 1 185 283 0 0 chr5 7387270 7387316 -192242834 + L2 LINE L2 3210 3255 -17 195 42 0 0 chr5 7387316 7387340 -192242810 + (TTA)n Simple_repeat Simple_repeat 1 24 0 555 117 0 36 chr5 7387563 7387674 -192242476 + (TTCC)n Simple_repeat Simple_repeat 2 108 0 314 182 0 0 chr5 7387977 7388032 -192242118 + MLT1K LTR MaLR 514 568 -20 1092 212 77 90 chr5 7388505 7388948 -192241202 - MLT1D LTR MaLR 0 505 69 295 291 51 17 chr5 7389216 7389435 -192240715 + L1M4 LINE L1 4234 4459 -1687 183 315 62 23 chr5 7389670 7389800 -192240350 + MIR SINE MIR 14 148 -114 21 36 0 0 chr5 7389977 7390005 -192240145 + AT_rich Low_complexity Low_complexity 1 28 0 1098 187 57 30 chr5 7390426 7390656 -192239494 - MER46A DNA MER2_type 0 236 1 1974 196 65 128 chr5 7390913 7391654 -192238496 + LTR8A LTR ERV1 34 727 0 616 292 62 62 chr5 7391685 7392089 -192238061 + L2 LINE L2 2809 3212 -101 417 291 35 62 chr5 7392296 7392554 -192237596 + LTR16B LTR ERVL 214 464 0 2079 170 101 0 chr5 7393764 7394152 -192235998 - MSTA LTR MaLR 0 428 2 1517 239 13 32 chr5 7394297 7394669 -192235481 - MLT1A1 LTR MaLR 0 365 1 22 0 0 0 chr5 7395311 7395333 -192234817 + AT_rich Low_complexity Low_complexity 1 22 0 1465 235 51 8 chr5 7396959 7397333 -192232817 + MLT1C LTR MaLR 3 392 -75 2518 123 62 10 chr5 7397891 7398291 -192231859 - MSTA LTR MaLR -7 421 1 1253 223 56 68 chr5 7398411 7398875 -192231275 - MLT2D LTR ERVL -66 454 1 1455 182 78 4 chr5 7399073 7399342 -192230808 - AluJb SINE Alu -14 298 10 191 266 0 47 chr5 7400495 7400559 -192229591 + L2 LINE L2 3208 3268 -4 1619 177 67 0 chr5 7400604 7400887 -192229263 + AluJb SINE Alu 9 310 -2 327 322 11 0 chr5 7400950 7401040 -192229110 - MIR3 SINE MIR -43 165 75 200 293 88 66 chr5 7402728 7402909 -192227241 - L2 LINE L2 -96 3217 3033 508 347 82 48 chr5 7403559 7404172 -192225978 - L2 LINE L2 -784 2530 1887 1807 148 121 12 chr5 7404172 7404510 -192225640 + THE1C LTR MaLR 1 375 0 508 347 82 48 chr5 7404510 7404611 -192225539 - L2 LINE L2 -1427 1887 1791 322 260 52 0 chr5 7406276 7406372 -192223778 + MER5A DNA MER1_type 9 109 -80 28 61 0 0 chr5 7407794 7407843 -192222307 + AT_rich Low_complexity Low_complexity 1 49 0 325 306 59 41 chr5 7409108 7409278 -192220872 - MIR SINE MIR -83 179 7 244 241 19 0 chr5 7409472 7409526 -192220624 + L2 LINE L2 3257 3311 -2 395 287 47 16 chr5 7409608 7409737 -192220413 - MLT1J2 LTR MaLR -305 145 13 538 362 33 9 chr5 7409835 7410172 -192219978 - L2 LINE L2 -944 2370 2026 21 57 0 0 chr5 7410904 7410939 -192219211 + AT_rich Low_complexity Low_complexity 1 35 0 384 209 41 12 chr5 7411202 7411355 -192218795 + L1MA9 LINE L1 6021 6290 -7 1671 158 34 4 chr5 7411778 7412093 -192218057 - AluSx SINE Alu 0 333 11 189 244 22 0 chr5 7412635 7412680 -192217470 - L2 LINE L2 -10 3303 3258 673 254 0 0 chr5 7412814 7412940 -192217210 + FLAM_A SINE Alu 5 130 -3 299 245 19 19 chr5 7412957 7413063 -192217087 + (TA)n Simple_repeat Simple_repeat 2 107 0 300 53 0 0 chr5 7413572 7413610 -192216540 + (TTTTC)n Simple_repeat Simple_repeat 2 39 0 1057 228 58 67 chr5 7413630 7414150 -192216000 - MLT2D LTR ERVL 0 520 1 2464 166 74 21 chr5 7414499 7414933 -192215217 - MSTB2 LTR MaLR 0 457 1 2131 108 3 7 chr5 7415026 7415321 -192214829 - AluSg1 SINE Alu -15 294 1 462 49 0 0 chr5 7415340 7415401 -192214749 + (CA)n Simple_repeat Simple_repeat 2 62 0 237 314 19 38 chr5 7415416 7415521 -192214629 - MIR3 SINE MIR -94 114 12 3061 169 60 3 chr5 7415864 7416431 -192213719 - MER6A DNA MER2_type -6 599 1 1899 147 0 33 chr5 7416877 7417176 -192212974 - AluSx SINE Alu -23 289 1 1499 224 153 20 chr5 7418187 7418488 -192211662 + MLT1D LTR MaLR 1 381 -124 186 71 0 0 chr5 7418488 7418516 -192211634 + (CAAA)n Simple_repeat Simple_repeat 2 29 0 1499 224 153 20 chr5 7418516 7418660 -192211490 + MLT1D LTR MaLR 381 505 0 15221 222 19 25 chr5 7418859 7424428 -192205722 - L1PA15 LINE L1 -1 6815 1262 774 290 81 39 chr5 7424461 7424795 -192205355 - L1PA15 LINE L1 -6032 755 408 709 276 91 53 chr5 7425029 7425479 -192204671 - MLT1C LTR MaLR 0 467 1 191 186 34 34 chr5 7425778 7425837 -192204313 - MIR SINE MIR -63 145 87 400 302 118 12 chr5 7426123 7426292 -192203858 - MIR SINE MIR -48 214 28 22 0 0 0 chr5 7426476 7426498 -192203652 + AT_rich Low_complexity Low_complexity 1 22 0 216 67 0 0 chr5 7427615 7427645 -192202505 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 309 322 113 0 chr5 7428196 7428311 -192201839 + L2 LINE L2 3145 3272 0 285 296 170 18 chr5 7428510 7428733 -192201417 + MIR SINE MIR 4 260 -2 2102 111 0 27 chr5 7429363 7429660 -192200490 - AluSg SINE Alu -21 289 1 189 299 37 65 chr5 7429868 7429975 -192200175 + L2 LINE L2 3154 3257 -15 882 256 106 41 chr5 7430400 7430889 -192199261 + LTR33 LTR ERVL 1 521 0 524 222 120 24 chr5 7431036 7431203 -192198947 - MLT1J2 LTR MaLR -267 183 1 496 269 86 0 chr5 7431899 7432085 -192198065 + LTR16C LTR ERVL 286 487 -4 308 24 24 0 chr5 7432492 7432533 -192197617 + (TAAA)n Simple_repeat Simple_repeat 2 43 0 1558 164 4 14 chr5 7432841 7433116 -192197034 + AluJo SINE Alu 19 290 -22 1346 31 9 0 chr5 7433776 7433998 -192196152 + (TGAG)n Simple_repeat Simple_repeat 1 224 0 199 0 0 61 chr5 7435509 7435542 -192194608 + (TG)n Simple_repeat Simple_repeat 2 32 0 318 269 175 18 chr5 7436118 7436289 -192193861 + L2 LINE L2 2147 2344 -970 417 271 46 30 chr5 7436392 7436626 -192193524 + L1MC4 LINE L1 7823 7995 0 2099 95 6 63 chr5 7436641 7436956 -192193194 + AluSq SINE Alu 5 301 -12 391 377 54 14 chr5 7437344 7437694 -192192456 + L1MEd LINE L1 284 647 -5472 816 113 8 6 chr5 7437814 7437929 -192192221 + MSTB LTR MaLR 3 116 -312 2128 132 21 66 chr5 7437929 7438309 -192191841 - THE1B LTR MaLR 0 364 2 12771 85 6 2 chr5 7438310 7439884 -192190266 - THE1B-int LTR MaLR 0 1580 1 283 86 0 0 chr5 7439884 7439919 -192190231 - THE1B LTR MaLR 0 355 321 303 246 49 55 chr5 7440327 7440416 -192189734 + L1MEd LINE L1 2192 2280 -3849 1096 224 121 44 chr5 7440416 7440755 -192189395 - MLT1A1 LTR MaLR 0 365 1 303 246 49 55 chr5 7440755 7440848 -192189302 + L1MEd LINE L1 2280 2373 -3756 35 83 0 0 chr5 7440883 7440967 -192189183 + AT_rich Low_complexity Low_complexity 1 84 0 945 311 136 60 chr5 7440974 7441183 -192188967 + L1MEd LINE L1 2425 2617 -3512 2297 104 0 7 chr5 7441183 7441480 -192188670 - AluSg SINE Alu -15 295 1 945 311 136 60 chr5 7441480 7441940 -192188210 + L1MEd LINE L1 2617 3041 -3088 1789 174 7 3 chr5 7441940 7442239 -192187911 - AluJb SINE Alu -12 300 1 945 311 136 60 chr5 7442239 7443173 -192186977 + L1MEd LINE L1 3041 4150 -1979 264 331 61 13 chr5 7443188 7443358 -192186792 + L1MEd LINE L1 4194 4354 -1775 2188 111 0 7 chr5 7443358 7443665 -192186485 + AluSg SINE Alu 1 305 -5 264 331 61 13 chr5 7443665 7443805 -192186345 + L1MEd LINE L1 4354 4519 -1610 300 300 36 70 chr5 7444046 7444376 -192185774 + L1MEc LINE L1 498 816 -5580 2630 208 65 50 chr5 7444498 7445095 -192185055 - MER82 DNA MER2_type -46 607 2 320 356 95 11 chr5 7445403 7445667 -192184483 + L1ME LINE L1 259 544 -5526 300 156 31 0 chr5 7445980 7446044 -192184106 + L1MA7 LINE L1 6226 6291 0 301 228 65 22 chr5 7447859 7447951 -192182199 - MIR SINE MIR -48 214 119 1197 286 130 12 chr5 7448277 7448784 -192181366 - MLT1F1 LTR MaLR 0 567 1 1436 316 36 30 chr5 7449004 7449128 -192181022 + MLT1G1 LTR MaLR 1 123 -472 2136 191 14 3 chr5 7449128 7449485 -192180665 - MLT1A1 LTR MaLR -4 361 1 1436 316 36 30 chr5 7449485 7449886 -192180264 + MLT1G1 LTR MaLR 123 529 -66 985 257 168 32 chr5 7449887 7450362 -192179788 + L1ME2 LINE L1 5623 6162 -2 277 313 75 0 chr5 7451426 7451560 -192178590 + Charlie7 DNA MER1_type 261 404 -2208 1743 293 26 26 chr5 7451676 7452297 -192177853 + L1MEc LINE L1 35 658 -5738 1883 81 102 42 chr5 7452297 7452580 -192177570 - AluY SINE Alu -11 300 1 1743 293 26 26 chr5 7452580 7452674 -192177476 + L1MEc LINE L1 657 750 -5646 302 229 19 57 chr5 7452674 7452779 -192177371 + Charlie7 DNA MER1_type 424 524 -2088 375 311 40 13 chr5 7452792 7452943 -192177207 + L2 LINE L2 2935 3089 -224 231 380 0 0 chr5 7452993 7453064 -192177086 - L2 LINE L2 -59 3213 3143 391 231 22 52 chr5 7453122 7453256 -192176894 + Charlie7 DNA MER1_type 556 685 -1927 232 125 0 42 chr5 7454100 7454148 -192176002 - LTR66 LTR ERVL -171 439 394 1794 150 0 24 chr5 7455065 7455359 -192174791 + AluSx SINE Alu 11 297 -15 278 355 142 18 chr5 7456501 7456783 -192173367 - L3 LINE CR1 -3 1574 1258 600 279 83 10 chr5 7456812 7457127 -192173023 + L1ME3 LINE L1 5815 6158 -12 2529 142 61 0 chr5 7457866 7458261 -192171889 + MSTA LTR MaLR 1 419 -9 302 344 103 43 chr5 7458426 7459059 -192171091 - L2 LINE L2 -556 2758 2088 3785 200 46 12 chr5 7459194 7459948 -192170202 - MLT-int LTR MaLR -955 780 1 307 259 82 0 chr5 7459978 7460063 -192170087 - MLT2B1 LTR ERVL -59 461 370 3840 128 37 37 chr5 7460074 7460716 -192169434 + MER4D LTR ERV1 141 782 -90 699 125 8 25 chr5 7460709 7460829 -192169321 - MER4D LTR ERV1 -785 118 1 * 273 128 0 0 chr5 7463159 7463206 -192166944 + (TG)n Simple_repeat Simple_repeat 2 48 0 2283 73 20 3 chr5 7463672 7463851 -192166299 - AluY SINE Alu -6 305 118 495 33 0 0 chr5 7463851 7463912 -192166238 + (TG)n Simple_repeat Simple_repeat 2 62 0 2283 73 20 3 chr5 7463912 7464032 -192166118 - AluY SINE Alu -193 118 1 205 305 102 0 chr5 7464619 7464737 -192165413 - MIR SINE MIR -74 188 59 * 250 311 56 28 chr5 7464669 7464849 -192165301 - L2 LINE L2 -355 2959 2775 396 0 0 0 chr5 7465256 7465300 -192164850 + (TG)n Simple_repeat Simple_repeat 2 45 0 744 182 8 8 chr5 7465749 7465881 -192164269 - FRAM SINE Alu -11 165 34 227 311 8 25 chr5 7466297 7466419 -192163731 - L1MEd LINE L1 -5947 172 53 234 0 0 0 chr5 7466429 7466455 -192163695 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 636 311 34 0 chr5 7466463 7466672 -192163478 + MIR SINE MIR 2 217 -45 594 54 14 0 chr5 7468565 7468639 -192161511 + MER4B LTR ERV1 528 602 -8 1351 226 43 48 chr5 7471438 7471810 -192158340 + MLT1A2 LTR MaLR 4 373 -1 235 217 17 17 chr5 7472046 7472106 -192158044 - MIR SINE MIR -117 145 86 256 278 120 0 chr5 7474029 7474137 -192156013 - L1ME4a LINE L1 -2 6119 5999 465 293 6 13 chr5 7475911 7476068 -192154082 - L1ME1 LINE L1 -5 6161 6006 * 2404 263 92 4 chr5 7476063 7476886 -192153264 + L1M4 LINE L1 3909 4804 -1342 1877 272 72 47 chr5 7476883 7479121 -192151029 - L1ME LINE L1 -3387 2693 390 * 258 262 24 0 chr5 7479522 7479606 -192150544 - L1ME LINE L1 -5933 137 52 268 242 67 67 chr5 7479806 7479926 -192150224 - MIR SINE MIR 0 262 143 1302 177 262 12 chr5 7479926 7480095 -192150055 - MSTA LTR MaLR 0 428 302 189 0 0 0 chr5 7480095 7480116 -192150034 + (GA)n Simple_repeat Simple_repeat 1 21 0 1302 177 262 12 chr5 7480116 7480274 -192149876 - MSTA LTR MaLR -125 303 19 638 148 289 0 chr5 7480285 7480420 -192149730 + MSTA LTR MaLR 3 176 -252 2044 102 26 22 chr5 7480420 7480733 -192149417 + MSTA-int LTR MaLR 1267 1580 0 647 160 0 25 chr5 7480733 7480852 -192149298 + MSTA LTR MaLR 1 116 -312 419 143 0 0 chr5 7480839 7480902 -192149248 + MSTA LTR MaLR 366 428 0 * 283 354 77 0 chr5 7480902 7481032 -192149118 - MIR SINE MIR -115 147 8 364 297 71 23 chr5 7482059 7482325 -192147825 - L1M4 LINE L1 -3171 2975 2697 23 33 0 0 chr5 7482904 7482934 -192147216 + AT_rich Low_complexity Low_complexity 1 30 0 2197 259 28 44 chr5 7483056 7483123 -192147027 + L1MC4 LINE L1 7213 7280 -762 2623 125 8 3 chr5 7483123 7483484 -192146666 + THE1B LTR MaLR 1 363 -1 2197 259 28 44 chr5 7483484 7483974 -192146176 + L1MC4 LINE L1 7280 7738 -304 2171 113 0 0 chr5 7483974 7484257 -192145893 + AluSq SINE Alu 5 287 -26 2197 259 28 44 chr5 7484257 7484551 -192145599 + L1MC4 LINE L1 7738 8035 -7 210 118 0 0 chr5 7487673 7487707 -192142443 + (TC)n Simple_repeat Simple_repeat 1 34 0 2313 136 33 25 chr5 7489444 7489805 -192140345 + THE1B LTR MaLR 1 364 0 6313 211 27 37 chr5 7490179 7492852 -192137298 + L1MC1 LINE L1 3376 6019 -314 6904 137 8 64 chr5 7493979 7495072 -192135078 + HSMAR2 DNA Mariner 2 1018 -284 2111 128 0 7 chr5 7495072 7495368 -192134782 - AluSx SINE Alu -18 294 1 6904 137 8 64 chr5 7495368 7495527 -192134623 + HSMAR2 DNA Mariner 1018 1184 -118 308 358 42 0 chr5 7495847 7495967 -192134183 - MER5B DNA MER1_type -33 145 21 2548 158 58 16 chr5 7496068 7496516 -192133634 + MLT1C LTR MaLR 1 467 0 2125 122 0 3 chr5 7497975 7498269 -192131881 - AluSx SINE Alu -11 301 9 3665 74 4 13 chr5 7499162 7499636 -192130514 - L1PA7 LINE L1 0 6154 5685 1932 48 9 0 chr5 7499636 7499865 -192130285 + L1PA7 LINE L1 5449 5679 -475 1533 239 12 6 chr5 7499865 7500196 -192129954 - MER58B DNA MER1_type -8 333 1 551 191 48 34 chr5 7500482 7500629 -192129521 - MER103 DNA DNA -16 150 2 3858 139 7 2 chr5 7501261 7501815 -192128335 - MER41D LTR ERV1 0 557 1 318 240 50 0 chr5 7502516 7502616 -192127534 + CT-rich Low_complexity Low_complexity 1 105 0 417 290 111 12 chr5 7502863 7503025 -192127125 - L3b LINE CR1 -63 1520 1343 220 261 0 31 chr5 7503910 7503975 -192126175 - MER5A DNA MER1_type -119 70 8 385 260 10 102 chr5 7504171 7504367 -192125783 + MER5B DNA MER1_type 1 178 0 26 30 0 0 chr5 7504609 7504642 -192125508 + AT_rich Low_complexity Low_complexity 1 33 0 419 177 104 0 chr5 7505012 7505108 -192125042 + L1MB5 LINE L1 5620 5725 -449 5315 145 34 14 chr5 7505122 7506004 -192124146 + MER49 LTR ERV1 24 923 0 1976 197 28 30 chr5 7506004 7506113 -192124037 + L1MB5 LINE L1 5722 5830 -344 2114 125 0 3 chr5 7506113 7506416 -192123734 + AluSx SINE Alu 1 302 -10 1976 197 28 30 chr5 7506416 7506743 -192123407 + L1MB5 LINE L1 5830 6157 -17 631 256 45 5 chr5 7506765 7506964 -192123186 - L2 LINE L2 -157 3156 2950 388 296 0 0 chr5 7507515 7507630 -192122520 + MIR SINE MIR 20 134 -128 423 262 0 0 chr5 7507653 7507798 -192122352 + (CA)n Simple_repeat Simple_repeat 2 146 0 480 256 0 0 chr5 7507820 7507976 -192122174 + (CA)n Simple_repeat Simple_repeat 1 156 0 2788 108 11 0 chr5 7508782 7509153 -192120997 + THE1C LTR MaLR 1 375 0 211 263 90 15 chr5 7510316 7510449 -192119701 + L2 LINE L2 2750 2892 -422 342 188 52 52 chr5 7510751 7510847 -192119303 + L2 LINE L2 3169 3264 -49 222 220 0 0 chr5 7510872 7510931 -192119219 + GA-rich Low_complexity Low_complexity 4 62 0 2010 131 84 73 chr5 7512341 7512641 -192117509 + LTR34 LTR ERV1 1 309 -390 1686 141 80 29 chr5 7512641 7512917 -192117233 - AluSg SINE Alu -20 290 1 2010 131 84 73 chr5 7512917 7513082 -192117068 + LTR34 LTR ERV1 309 471 -228 1435 75 27 0 chr5 7513087 7513273 -192116877 + MER30 DNA MER1_type 6 196 -34 878 188 81 22 chr5 7513289 7513512 -192116638 + LTR34 LTR ERV1 464 699 0 1503 199 192 12 chr5 7515039 7515446 -192114704 + MLT2B1 LTR ERVL 1 480 -40 2234 102 30 25 chr5 7515449 7515992 -192114158 + MER51A LTR ERV1 1 634 0 294 295 11 0 chr5 7517991 7518086 -192112064 + MIR SINE MIR 77 172 -90 345 315 47 7 chr5 7518092 7518241 -192111909 + MIR SINE MIR 108 262 0 469 233 23 39 chr5 7518637 7518766 -192111384 + MER5A DNA MER1_type 63 189 0 753 268 13 31 chr5 7518771 7518937 -192111213 + MER58A DNA MER1_type 1 163 -2257 2255 147 50 21 chr5 7518937 7519374 -192110776 - LTR7 LTR ERV1 0 450 1 753 268 13 31 chr5 7519374 7519435 -192110715 + MER58A DNA MER1_type 163 224 0 265 304 193 12 chr5 7520560 7520721 -192109429 + MLT1H1 LTR MaLR 76 265 -290 4440 98 21 2 chr5 7520844 7521458 -192108692 + MER41B LTR ERV1 1 626 -9 292 202 185 53 chr5 7521482 7521655 -192108495 + MLT1H1 LTR MaLR 354 554 -1 1750 20 0 0 chr5 7521967 7522165 -192107985 - L1PA4 LINE L1 -2 6153 5956 1489 6 0 0 chr5 7522165 7522328 -192107822 + L1PA4 LINE L1 5781 5943 -212 1284 19 0 37 chr5 7523446 7523608 -192106542 + L1PA4 LINE L1 6000 6155 0 2015 255 48 14 chr5 7523675 7524484 -192105666 + L1ME1 LINE L1 4285 5121 -1025 1416 207 155 17 chr5 7524528 7524575 -192105575 - MSTD LTR MaLR 0 396 357 2740 126 34 0 chr5 7524575 7524989 -192105161 + MSTA LTR MaLR 1 428 0 1416 207 155 17 chr5 7524989 7525289 -192104861 - MSTD LTR MaLR -39 357 1 3364 235 40 23 chr5 7525289 7525441 -192104709 + L1ME1 LINE L1 5179 5327 -839 2135 140 0 3 chr5 7525441 7525748 -192104402 - AluSg SINE Alu -4 306 1 3364 235 40 23 chr5 7525748 7526531 -192103619 + L1ME1 LINE L1 5327 6117 -49 28 29 0 0 chr5 7526749 7526784 -192103366 + AT_rich Low_complexity Low_complexity 1 35 0 558 299 7 0 chr5 7528599 7528743 -192101407 + MIR SINE MIR 13 157 -105 434 183 17 126 chr5 7529629 7529729 -192100421 + MLT1D LTR MaLR 1 76 -429 1999 194 3 6 chr5 7529729 7530095 -192100055 - MLT1A1 LTR MaLR 0 365 1 434 183 17 126 chr5 7530095 7530169 -192099981 + MLT1D LTR MaLR 76 156 -349 261 0 0 0 chr5 7530186 7530215 -192099935 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1004 138 0 0 chr5 7530216 7530361 -192099789 - AluSg/x SINE Alu -33 279 135 817 229 124 1 chr5 7530395 7530620 -192099530 + MLT1D LTR MaLR 226 505 0 608 262 29 14 chr5 7532085 7532295 -192097855 + MER20 DNA MER1_type 4 216 -3 2284 107 0 0 chr5 7533261 7533571 -192096579 + AluSx SINE Alu 1 310 -2 190 308 33 0 chr5 7535217 7535308 -192094842 + MIR SINE MIR 49 142 -120 214 306 74 8 chr5 7536199 7536320 -192093830 + L2 LINE L2 3184 3312 -1 205 229 0 49 chr5 7536672 7536733 -192093417 + GA-rich Low_complexity Low_complexity 1 58 0 935 214 45 67 chr5 7537361 7537674 -192092476 - MLT1B LTR MaLR 0 390 85 180 295 16 0 chr5 7537730 7537791 -192092359 - L2 LINE L2 -562 2752 2691 547 125 0 0 chr5 7537914 7537994 -192092156 - MADE1 DNA Mariner 0 80 1 21 0 0 0 chr5 7538472 7538493 -192091657 + AT_rich Low_complexity Low_complexity 1 21 0 781 239 91 0 chr5 7539462 7539692 -192090458 + MIR SINE MIR 12 262 0 21 36 0 0 chr5 7539819 7539847 -192090303 + AT_rich Low_complexity Low_complexity 1 28 0 2253 108 0 0 chr5 7539977 7540264 -192089886 + AluSx SINE Alu 1 287 -25 217 302 54 39 chr5 7540652 7540781 -192089369 + L2 LINE L2 2927 3057 -256 2087 244 30 38 chr5 7540950 7540988 -192089162 - MER90 LTR ERV1 -4 610 573 1847 207 11 3 chr5 7540988 7541350 -192088800 + MLT1A1 LTR MaLR 1 365 0 2087 244 30 38 chr5 7541350 7541922 -192088228 - MER90 LTR ERV1 -41 573 5 186 43 0 0 chr5 7541967 7541990 -192088160 + (T)n Simple_repeat Simple_repeat 1 23 0 324 0 0 0 chr5 7542077 7542113 -192088037 + (TG)n Simple_repeat Simple_repeat 2 37 0 970 243 58 29 chr5 7542127 7542440 -192087710 - MER2 DNA MER2_type -20 325 4 284 164 0 82 chr5 7542454 7542527 -192087623 + MLT2B1 LTR ERVL 454 520 0 498 104 14 49 chr5 7543452 7543596 -192086554 + (TA)n Simple_repeat Simple_repeat 2 140 0 214 167 46 56 chr5 7543600 7543708 -192086442 + (TTATA)n Simple_repeat Simple_repeat 2 108 0 325 281 0 15 chr5 7545338 7545473 -192084677 + (CA)n Simple_repeat Simple_repeat 2 134 0 184 254 9 9 chr5 7545485 7545599 -192084551 + (CA)n Simple_repeat Simple_repeat 1 114 0 1763 214 63 0 chr5 7546011 7546389 -192083761 + MER57A LTR ERV1 1 402 -1 285 291 3 11 chr5 7547265 7547366 -192082784 - MIR SINE MIR -87 121 20 182 313 15 0 chr5 7548452 7548519 -192081631 - MIR3 SINE MIR -30 178 111 2195 108 60 28 chr5 7548663 7549016 -192081134 - THE1B LTR MaLR 0 364 1 11455 103 10 1 chr5 7549016 7550582 -192079568 - THE1B-int LTR MaLR 0 1580 1 2274 102 54 23 chr5 7550582 7550935 -192079215 - THE1B LTR MaLR 0 364 1 1777 148 14 11 chr5 7551265 7551543 -192078607 + AluSg SINE Alu 14 292 -18 1098 182 5 0 chr5 7551570 7551762 -192078388 + L1PB1 LINE L1 3 195 -6668 14486 154 49 12 chr5 7551765 7557765 -192072385 + L1PB1 LINE L1 634 6866 -1 2680 136 2 5 chr5 7558176 7558581 -192071569 + MSTA-int LTR MaLR 1248 1651 0 2364 119 107 20 chr5 7558581 7558975 -192071175 + MSTA LTR MaLR 1 428 0 224 261 15 15 chr5 7559060 7559125 -192071025 + L2 LINE L2 3203 3267 -5 1082 235 90 36 chr5 7560440 7561049 -192069101 - MER76 LTR ERV -6 682 3 372 170 51 20 chr5 7561183 7561450 -192068700 + (TA)n Simple_repeat Simple_repeat 1 275 0 217 311 54 0 chr5 7562130 7562204 -192067946 - L2 LINE L2 -229 3043 2966 1620 229 103 63 chr5 7562267 7563017 -192067133 - L1ME3 LINE L1 -85 6077 5298 5502 150 45 15 chr5 7563081 7563983 -192066167 - L1PB1 LINE L1 -1 6150 5136 2198 107 0 41 chr5 7563983 7564301 -192065849 + AluSg SINE Alu 1 305 -5 5502 150 45 15 chr5 7564301 7564563 -192065587 - L1PB1 LINE L1 -1015 5136 4883 442 245 161 10 chr5 7564572 7564764 -192065386 + L1M4 LINE L1 3080 3300 -2846 307 233 207 9 chr5 7564916 7565032 -192065118 + L1M4 LINE L1 4484 4622 -1524 670 211 28 22 chr5 7565052 7565232 -192064918 - L1ME3 LINE L1 -1542 4604 4424 22 35 0 0 chr5 7565683 7565712 -192064438 + AT_rich Low_complexity Low_complexity 1 29 0 25 31 0 0 chr5 7566686 7566718 -192063432 + AT_rich Low_complexity Low_complexity 1 32 0 2188 97 3 7 chr5 7566894 7567182 -192062968 + AluSq SINE Alu 14 300 -13 348 252 53 30 chr5 7568192 7568323 -192061827 - LTR16A LTR ERVL -84 366 233 2010 233 45 11 chr5 7568548 7568991 -192061159 - MLT1C LTR MaLR -9 458 1 648 218 292 9 chr5 7569033 7569628 -192060522 - LTR50 LTR ERVL -1 794 9 1385 176 77 35 chr5 7570660 7570972 -192059178 - MLT1A1 LTR MaLR -2 363 39 249 83 0 0 chr5 7571167 7571203 -192058947 + (TTG)n Simple_repeat Simple_repeat 1 36 0 863 169 0 26 chr5 7571203 7571332 -192058818 - AluJo SINE Alu -49 263 135 2071 118 35 3 chr5 7571332 7571620 -192058530 - AluSx SINE Alu -15 297 1 863 169 0 26 chr5 7571620 7571633 -192058517 - AluJo SINE Alu -177 135 123 204 67 0 0 chr5 7571638 7571668 -192058482 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 36 0 0 0 chr5 7571668 7571704 -192058446 + AT_rich Low_complexity Low_complexity 1 36 0 345 194 0 0 chr5 7571704 7571766 -192058384 - AluJo SINE Alu -169 133 72 208 356 0 14 chr5 7571954 7572027 -192058123 + MIR SINE MIR 22 93 -169 329 271 232 13 chr5 7572415 7572570 -192057580 - MIR SINE MIR -17 245 57 1177 227 139 17 chr5 7573297 7573505 -192056645 - MSTD LTR MaLR 0 396 215 2231 120 3 0 chr5 7573505 7573806 -192056344 - AluSx SINE Alu -10 302 1 1177 227 139 17 chr5 7573806 7573949 -192056201 - MSTD LTR MaLR -181 215 2 236 330 18 0 chr5 7574799 7574911 -192055239 + L1MB7 LINE L1 1372 1485 -4899 214 125 42 0 chr5 7574911 7574959 -192055191 + (TA)n Simple_repeat Simple_repeat 1 50 0 221 29 0 57 chr5 7574991 7575026 -192055124 + (CAGAGA)n Simple_repeat Simple_repeat 4 36 0 538 333 143 28 chr5 7575038 7575725 -192054425 + L1MB7 LINE L1 1667 2432 -4131 875 282 109 30 chr5 7575796 7576339 -192053811 + L1MB7 LINE L1 4056 4641 -1741 14144 72 6 17 chr5 7576371 7578193 -192051957 - HERVL LTR ERVL -350 5304 3503 9116 76 26 1 chr5 7578198 7579353 -192050797 - HERVL LTR ERVL -2424 3230 2047 630 78 0 0 chr5 7580234 7580311 -192049839 - MADE1 DNA Mariner 0 80 4 2099 152 0 0 chr5 7580619 7580922 -192049228 + AluSx SINE Alu 1 303 -9 215 170 43 0 chr5 7581824 7581871 -192048279 + GA-rich Low_complexity Low_complexity 1 49 0 581 215 90 42 chr5 7583340 7583484 -192046666 + MER106B DNA MER1_type 1 151 -908 238 214 0 0 chr5 7583505 7583547 -192046603 + MER106B DNA MER1_type 1018 1059 0 3622 201 47 17 chr5 7583581 7584233 -192045917 + L1MB7 LINE L1 5383 6083 -337 1207 144 55 15 chr5 7584233 7584435 -192045715 + MER6B DNA MER2_type 1 210 0 3622 201 47 17 chr5 7584435 7584753 -192045397 + L1MB7 LINE L1 6083 6390 -30 297 355 0 0 chr5 7586026 7586133 -192044017 - L3b LINE CR1 -228 1355 1249 232 308 0 0 chr5 7589553 7589618 -192040532 + T-rich Low_complexity Low_complexity 1 65 0 379 287 63 40 chr5 7589781 7590348 -192039802 - L1ME LINE L1 -265 5856 5257 2183 178 11 13 chr5 7591051 7591427 -192038723 + THE1C LTR MaLR 1 375 0 886 303 27 30 chr5 7593019 7593349 -192036801 + LTR16A LTR ERVL 122 450 0 2017 158 0 0 chr5 7593859 7594163 -192035987 + AluSx SINE Alu 1 304 -8 517 111 0 0 chr5 7594206 7594278 -192035872 + AluS SINE Alu 232 303 -8 2291 48 4 0 chr5 7594383 7594651 -192035499 + L1PA5 LINE L1 5886 6154 0 439 147 8 9 chr5 7594651 7594760 -192035390 + L1M2 LINE L1 5597 5778 -513 41 0 0 0 chr5 7594766 7594807 -192035343 + AT_rich Low_complexity Low_complexity 1 41 0 8779 216 53 13 chr5 7594831 7597283 -192032867 + L1MA7 LINE L1 3084 5647 -1918 325 149 89 18 chr5 7597412 7597580 -192032570 + (TA)n Simple_repeat Simple_repeat 1 180 0 * 377 178 46 36 chr5 7597475 7597803 -192032347 + (TTATA)n Simple_repeat Simple_repeat 1 331 0 6175 147 28 27 chr5 7597823 7599523 -192030627 + L1MA7 LINE L1 5644 7337 -373 3367 33 5 18 chr5 7599526 7599923 -192030227 - L1PA4 LINE L1 0 6155 5764 2084 174 16 8 chr5 7599925 7600311 -192029839 + L1MA7 LINE L1 7321 7709 -1 549 288 47 56 chr5 7600857 7601111 -192029039 - MIR SINE MIR -16 246 3 596 186 18 0 chr5 7602492 7602605 -192027545 - L1P4 LINE L1 -549 5619 5505 465 240 0 56 chr5 7602606 7602731 -192027419 + MLT1A1 LTR MaLR 246 363 -2 379 269 0 21 chr5 7602733 7602826 -192027324 - MLT1A1 LTR MaLR -272 93 3 22 0 0 0 chr5 7604383 7604405 -192025745 + AT_rich Low_complexity Low_complexity 1 22 0 243 0 0 0 chr5 7604470 7604497 -192025653 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1005 93 29 88 chr5 7604497 7604702 -192025448 - L1PA10 LINE L1 -13 6155 5963 1616 127 14 113 chr5 7604817 7605163 -192024987 - LTR9 LTR ERV1 -300 312 1 236 293 0 13 chr5 7605186 7605261 -192024889 + MLT-int LTR MaLR 935 1008 -727 2037 194 48 68 chr5 7605291 7605775 -192024375 + MLT1A1-int LTR MaLR 1254 1727 -8 2038 159 21 40 chr5 7605782 7606154 -192023996 + MLT1A1 LTR MaLR 1 365 0 279 271 51 25 chr5 7607887 7608005 -192022145 - MIR SINE MIR -72 136 16 1014 179 72 9 chr5 7608409 7608632 -192021518 + L1MC2 LINE L1 6099 6335 -9 2072 137 7 0 chr5 7609827 7610133 -192020017 - AluSx SINE Alu -4 308 1 2349 181 34 79 chr5 7610706 7610963 -192019187 - MER41C LTR ERV1 -1 634 367 2260 142 129 5 chr5 7610963 7611344 -192018806 + MSTA LTR MaLR 1 428 0 2349 181 34 79 chr5 7611344 7611702 -192018448 - MER41C LTR ERV1 -268 367 1 1276 196 86 65 chr5 7612219 7612601 -192017549 + MLT1B LTR MaLR 1 390 0 22 35 0 0 chr5 7614445 7614474 -192015676 + AT_rich Low_complexity Low_complexity 1 29 0 2575 108 5 24 chr5 7616241 7616612 -192013538 + THE1B LTR MaLR 1 364 0 351 0 0 0 chr5 7617172 7617211 -192012939 + (TGAA)n Simple_repeat Simple_repeat 3 41 0 954 255 180 19 chr5 7620530 7620902 -192009248 + MLT1H LTR MaLR 1 432 -117 214 293 19 24 chr5 7620904 7621013 -192009137 - MIR SINE MIR -94 114 4 264 77 0 0 chr5 7621174 7621213 -192008937 + (TC)n Simple_repeat Simple_repeat 1 39 0 1655 172 14 24 chr5 7621878 7622175 -192007975 + AluJb SINE Alu 5 298 -14 220 325 73 24 chr5 7622181 7622304 -192007846 - MIR SINE MIR -74 188 60 2088 63 35 3 chr5 7622771 7623056 -192007094 + L1PA10 LINE L1 5731 6024 -144 1742 122 0 0 chr5 7623162 7623417 -192006733 + L1PA13 LINE L1 5907 6161 -2 471 236 0 0 chr5 7623690 7623779 -192006371 + MER58A DNA MER1_type 1 89 -18 2165 134 7 0 chr5 7624230 7624537 -192005613 + AluSx SINE Alu 1 309 -3 628 270 23 0 chr5 7625529 7625703 -192004447 - MER5B DNA MER1_type 0 178 1 267 263 18 35 chr5 7625905 7626019 -192004131 - MIR SINE MIR -100 162 51 2286 110 3 0 chr5 7628640 7628950 -192001200 + AluSx SINE Alu 1 311 -1 1929 142 33 0 chr5 7630684 7630986 -191999164 - AluJo SINE Alu 0 312 1 702 252 121 114 chr5 7631620 7632211 -191997939 + MLT1F1 LTR MaLR 1 567 0 21 0 0 0 chr5 7632268 7632289 -191997861 + AT_rich Low_complexity Low_complexity 1 21 0 337 247 41 14 chr5 7632290 7632363 -191997787 + MER21B LTR ERV1 15 89 -774 2895 243 110 8 chr5 7632385 7633151 -191996999 + MER21B LTR ERV1 19 862 -1 425 222 23 123 chr5 7634788 7634959 -191995191 - MIR SINE MIR -81 181 28 237 163 0 0 chr5 7635194 7635237 -191994913 + (TGGA)n Simple_repeat Simple_repeat 1 43 0 573 257 44 79 chr5 7635686 7636001 -191994149 + L2 LINE L2 2979 3282 -31 378 240 163 78 chr5 7636039 7636130 -191994020 + HAL1 LINE L1 1010 1092 -1415 2124 121 0 0 chr5 7636130 7636412 -191993738 + AluSx SINE Alu 1 282 -30 378 240 163 78 chr5 7636412 7636578 -191993572 + HAL1 LINE L1 1092 1289 -1218 617 249 92 18 chr5 7636619 7636848 -191993302 + LTR33 LTR ERVL 4 249 -272 243 219 16 31 chr5 7637209 7637273 -191992877 + LTR33 LTR ERVL 456 518 -3 365 273 74 34 chr5 7637285 7637461 -191992689 + HAL1 LINE L1 1336 1518 -989 379 223 96 0 chr5 7638413 7638507 -191991643 + MER58 DNA MER1_type 1 103 -112 838 292 81 26 chr5 7638642 7639063 -191991087 + MLT1J2 LTR MaLR 4 447 -3 1186 55 0 0 chr5 7639981 7640127 -191990023 - L1P LINE L1 -5999 147 2 225 0 0 0 chr5 7640752 7640777 -191989373 + (TG)n Simple_repeat Simple_repeat 2 26 0 1888 208 78 8 chr5 7641177 7641545 -191988605 + L1M4 LINE L1 4917 5346 -838 1915 61 15 8 chr5 7641545 7641806 -191988344 + L1PA13 LINE L1 5901 6163 0 1888 208 78 8 chr5 7641806 7642049 -191988101 + L1M4 LINE L1 5346 5570 -614 399 264 15 1 chr5 7642110 7642222 -191987928 + L1M4 LINE L1 5517 5626 -558 25 31 0 0 chr5 7642246 7642278 -191987872 + AT_rich Low_complexity Low_complexity 1 32 0 981 125 7 0 chr5 7642357 7642509 -191987641 + L1M4 LINE L1 5637 5789 -395 317 49 0 0 chr5 7642610 7642651 -191987499 + L1PA3 LINE L1 6112 6152 -3 2606 131 5 0 chr5 7643999 7644372 -191985778 + THE1C LTR MaLR 1 375 0 28 48 0 0 chr5 7645115 7645157 -191984993 + AT_rich Low_complexity Low_complexity 1 42 0 341 301 52 0 chr5 7646913 7647049 -191983101 + MIR SINE MIR 108 250 -12 10144 74 7 37 chr5 7648626 7650550 -191979600 - L1PA7 LINE L1 0 6154 4295 2320 104 0 0 chr5 7650550 7650847 -191979303 - AluSc SINE Alu -12 297 1 10144 74 7 37 chr5 7650847 7651197 -191978953 - L1PA7 LINE L1 -1859 4295 3936 234 352 122 13 chr5 7652461 7652691 -191977459 + L2 LINE L2 2812 3066 -206 630 95 0 78 chr5 7652947 7653082 -191977068 + AluY SINE Alu 197 311 0 198 143 0 0 chr5 7653229 7653264 -191976886 + (TCC)n Simple_repeat Simple_repeat 3 37 0 433 316 7 20 chr5 7653932 7654084 -191976066 + MIR SINE MIR 16 165 -97 527 203 0 0 chr5 7654382 7654515 -191975635 - MER96B DNA MER1_type? -241 176 44 308 211 39 19 chr5 7654539 7654643 -191975507 + MIR SINE MIR 155 260 -2 721 306 83 23 chr5 7656411 7656806 -191973344 + L2 LINE L2 2888 3306 -7 29 70 0 0 chr5 7657116 7657173 -191972977 + AT_rich Low_complexity Low_complexity 1 57 0 394 279 39 26 chr5 7658533 7658687 -191971463 + MIR SINE MIR 34 189 -73 31 58 0 0 chr5 7660897 7660949 -191969201 + AT_rich Low_complexity Low_complexity 1 52 0 225 260 58 29 chr5 7661180 7661284 -191968866 - L1MC/D LINE L1 -1940 5868 5762 1227 212 48 79 chr5 7661294 7661624 -191968526 - MLT1F LTR MaLR -20 522 203 986 194 55 27 chr5 7711639 7711968 -191918182 + L1MC2 LINE L1 4979 5316 -830 * 5083 166 19 22 chr5 7711963 7713154 -191916996 - L1PA16 LINE L1 -12 6154 4975 2839 201 24 39 chr5 7713156 7713826 -191916324 + L1MC2 LINE L1 5304 5963 -381 565 194 46 0 chr5 7714331 7714439 -191915711 + L1PA15 LINE L1 6051 6163 -2 1071 216 26 45 chr5 7714445 7714709 -191915441 - MLT1A1 LTR MaLR -106 259 1 2673 253 73 63 chr5 7714730 7715494 -191914656 + MLT-int LTR MaLR 171 948 -787 2727 175 26 72 chr5 7715494 7716135 -191914015 - LTR9 LTR ERV1 0 612 1 2673 253 73 63 chr5 7716135 7716295 -191913855 + MLT-int LTR MaLR 948 1105 -630 2070 195 48 66 chr5 7716262 7716745 -191913405 + MLT1A1-int LTR MaLR 1254 1727 -8 * 1918 159 21 40 chr5 7716752 7717124 -191913026 + MLT1A1 LTR MaLR 1 365 0 242 271 51 25 chr5 7718857 7718975 -191911175 - MIR SINE MIR -72 136 16 879 147 70 0 chr5 7719633 7719790 -191910360 + MLT1C LTR MaLR 1 168 -299 228 170 0 19 chr5 7719798 7719851 -191910299 + T-rich Low_complexity Low_complexity 5 56 0 2212 108 3 0 chr5 7719860 7720157 -191909993 - AluSx SINE Alu -10 302 5 912 214 146 11 chr5 7720163 7720438 -191909712 + MLT1C LTR MaLR 156 467 0 222 330 102 8 chr5 7724304 7724422 -191905728 - MIR SINE MIR -63 145 17 1452 224 43 19 chr5 7725062 7725478 -191904672 - MLT1C LTR MaLR -41 426 1 521 300 77 13 chr5 7726324 7726557 -191903593 + MIR SINE MIR 14 261 -1 1666 156 33 77 chr5 7726566 7726937 -191903213 + MER93b LTR ERV1 1 356 -17 1968 134 13 29 chr5 7726937 7727244 -191902906 - AluSx SINE Alu -10 302 1 1666 156 33 77 chr5 7727244 7727262 -191902888 + MER93b LTR ERV1 356 373 0 23 0 0 0 chr5 7728075 7728098 -191902052 + AT_rich Low_complexity Low_complexity 1 23 0 1054 231 43 61 chr5 7728318 7728694 -191901456 - MLT1A2 LTR MaLR -4 370 2 21 0 0 0 chr5 7728743 7728764 -191901386 + AT_rich Low_complexity Low_complexity 1 21 0 2141 126 0 0 chr5 7729195 7729488 -191900662 + AluSx SINE Alu 6 298 -14 324 179 45 0 chr5 7731251 7731318 -191898832 - MLT2D LTR ERVL 0 520 451 1787 196 32 27 chr5 7731390 7731762 -191898388 - MLT2D LTR ERVL -40 374 1 195 107 0 0 chr5 7734476 7734504 -191895646 + MIR SINE MIR 17 44 -218 * 317 153 56 14 chr5 7734502 7734574 -191895576 - MIR SINE MIR -90 172 98 1449 208 83 38 chr5 7734719 7735162 -191894988 - MLT1C LTR MaLR 0 467 5 392 118 15 0 chr5 7735545 7735613 -191894537 + (TCTA)n Simple_repeat Simple_repeat 4 72 0 283 161 345 0 chr5 7735689 7735776 -191894374 + L2 LINE L2 3193 3309 -4 441 50 0 0 chr5 7735845 7735905 -191894245 + (CA)n Simple_repeat Simple_repeat 1 60 0 1422 186 54 11 chr5 7736429 7736708 -191893442 + MER2 DNA MER2_type 48 338 -7 334 271 36 7 chr5 7736746 7736886 -191893264 - L2 LINE L2 -805 2509 2366 530 279 123 6 chr5 7737210 7737526 -191892624 - L2 LINE L2 -889 2425 2073 231 313 106 28 chr5 7737571 7737642 -191892508 - L2 LINE L2 -1533 1781 1717 2200 115 0 16 chr5 7737642 7737956 -191892194 - AluSx SINE Alu -3 309 1 231 313 106 28 chr5 7737956 7738101 -191892049 - L2 LINE L2 -1597 1717 1548 240 290 20 60 chr5 7738738 7738838 -191891312 + MIR SINE MIR 40 135 -73 1509 93 29 0 chr5 7738881 7739086 -191891064 - AluSc SINE Alu -6 303 93 1830 157 10 3 chr5 7739835 7740140 -191890010 + AluSx SINE Alu 5 311 -1 430 265 54 20 chr5 7740162 7740309 -191889841 - LTR33 LTR ERVL -54 467 316 958 161 7 13 chr5 7741353 7741508 -191888642 - AluSq SINE Alu -159 154 1 2650 216 112 111 chr5 7741519 7741547 -191888603 - Zaphod DNA AcHobo -1692 2339 2313 1818 107 122 0 chr5 7741547 7741810 -191888340 - AluSq SINE Alu -18 295 1 2650 216 112 111 chr5 7741810 7743197 -191886953 - Zaphod DNA AcHobo -1718 2313 928 1716 122 122 0 chr5 7743197 7743459 -191886691 + AluSq SINE Alu 1 294 -19 2650 216 112 111 chr5 7743459 7743498 -191886652 - Zaphod DNA AcHobo -3103 928 891 2044 134 10 7 chr5 7743498 7743790 -191886360 + AluSq SINE Alu 1 293 -20 2650 216 112 111 chr5 7743790 7744035 -191886115 - Zaphod DNA AcHobo -3140 891 637 552 254 18 47 chr5 7744157 7744326 -191885824 - Zaphod DNA AcHobo -3795 236 73 268 325 41 6 chr5 7744482 7744651 -191885499 + L1ME3A LINE L1 5749 5923 -247 255 273 27 82 chr5 7744763 7744946 -191885204 + L1ME3A LINE L1 5989 6161 -9 2015 138 7 0 chr5 7745072 7745363 -191884787 + AluY SINE Alu 1 293 -18 2031 187 52 29 chr5 7745479 7745960 -191884190 - LTR22B LTR ERVK 0 492 1 197 275 7 22 chr5 7747828 7747897 -191882253 + GA-rich Low_complexity Low_complexity 1 69 -67 1694 193 19 43 chr5 7747897 7748271 -191881879 - MLT1A1 LTR MaLR 0 365 1 197 275 7 22 chr5 7748271 7748339 -191881811 + GA-rich Low_complexity Low_complexity 69 136 0 24 0 0 0 chr5 7748493 7748517 -191881633 + AT_rich Low_complexity Low_complexity 1 24 0 693 249 98 10 chr5 7748765 7749070 -191881080 - L1M4 LINE L1 -1484 4662 4331 284 161 148 37 chr5 7752403 7752484 -191877666 + MLT1C LTR MaLR 3 92 -375 1293 194 127 12 chr5 7752611 7752957 -191877193 + MLT1C LTR MaLR 82 467 0 414 0 0 0 chr5 7754609 7754655 -191875495 + (TCTA)n Simple_repeat Simple_repeat 1 46 0 180 111 0 0 chr5 7754656 7754683 -191875467 + (CATATA)n Simple_repeat Simple_repeat 4 30 0 539 41 27 0 chr5 7755383 7755456 -191874694 + (GAAAA)n Simple_repeat Simple_repeat 2 76 0 286 298 43 43 chr5 7755522 7755683 -191874467 + L3 LINE CR1 1293 1453 -124 472 154 82 27 chr5 7756215 7756325 -191873825 + MER95 LTR ERV 316 431 0 232 318 57 0 chr5 7756482 7756570 -191873580 + MIR SINE MIR 97 189 -73 180 0 0 0 chr5 7756855 7756875 -191873275 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 237 186 0 0 chr5 7756875 7756918 -191873232 + L1M4 LINE L1 5164 5206 -940 5495 175 31 32 chr5 7757255 7758206 -191871944 - L1MC1 LINE L1 0 6333 5379 2176 104 21 0 chr5 7758206 7758494 -191871656 - AluSx SINE Alu -18 294 1 5495 175 31 32 chr5 7758494 7758714 -191871436 - L1MC1 LINE L1 -954 5379 5160 1642 152 4 0 chr5 7760148 7760411 -191869739 - L1MA8 LINE L1 -392 5899 5636 836 166 31 6 chr5 7760410 7760573 -191869577 + L1MA6 LINE L1 5937 6103 -197 * 290 192 0 0 chr5 7760629 7760681 -191869469 + L1MA8 LINE L1 6217 6268 -23 535 299 99 5 chr5 7762081 7762292 -191867858 + MIR SINE MIR 25 255 -7 383 233 39 10 chr5 7762544 7762647 -191867503 - MLT1J LTR MaLR -303 208 103 272 200 12 0 chr5 7764644 7764724 -191865426 + GA-rich Low_complexity Low_complexity 3 83 0 2428 130 11 3 chr5 7766333 7766694 -191863456 + THE1B LTR MaLR 1 364 0 552 265 163 30 chr5 7766718 7767050 -191863100 + L2 LINE L2 2369 2744 -570 218 335 47 43 chr5 7767162 7767440 -191862710 + L2 LINE L2 2231 2509 -805 209 330 35 52 chr5 7767545 7767660 -191862490 + L2 LINE L2 3117 3229 -43 240 278 28 0 chr5 7768831 7768903 -191861247 + (CA)n Simple_repeat Simple_repeat 1 74 0 339 177 46 0 chr5 7768928 7769058 -191861092 + (CA)n Simple_repeat Simple_repeat 2 137 0 356 309 15 7 chr5 7769233 7769369 -191860781 - MER5A DNA MER1_type -3 186 50 423 56 42 0 chr5 7769852 7769923 -191860227 + (CACAA)n Simple_repeat Simple_repeat 1 74 0 2071 178 35 0 chr5 7770078 7770455 -191859695 - MLT1B LTR MaLR 0 390 1 207 0 0 0 chr5 7770838 7770861 -191859289 + (A)n Simple_repeat Simple_repeat 1 23 0 258 271 94 12 chr5 7771270 7771355 -191858795 + L1ME LINE L1 5482 5573 -548 2606 193 14 60 chr5 7771601 7772181 -191857969 + MER68 LTR ERV1 2 554 -8 2025 170 29 24 chr5 7772335 7772488 -191857662 + MSTA LTR MaLR 45 196 -232 2073 126 7 10 chr5 7772488 7772790 -191857360 + AluSx SINE Alu 1 301 -11 2025 170 29 24 chr5 7772790 7772921 -191857229 + MSTA LTR MaLR 196 334 -94 2696 108 11 0 chr5 7772921 7773292 -191856858 + THE1C LTR MaLR 1 375 0 2025 170 29 24 chr5 7773292 7773388 -191856762 + MSTA LTR MaLR 334 428 0 195 303 156 9 chr5 7774102 7774211 -191855939 - L2 LINE L2 -10 3303 3179 1429 279 33 4 chr5 7774572 7775023 -191855127 + LTR16B LTR ERVL 1 464 0 361 272 148 0 chr5 7775918 7776080 -191854070 - MIR SINE MIR -64 198 13 971 241 65 32 chr5 7777987 7778356 -191851794 + LTR37A LTR ERV1 39 419 -7 216 0 0 0 chr5 7778395 7778419 -191851731 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 3548 139 55 3 chr5 7779860 7780428 -191849722 - MER50 LTR ERV1 -23 711 115 414 294 85 28 chr5 7780399 7780610 -191849540 - MER112 DNA MER1_type -21 239 17 * 878 269 137 28 chr5 7780732 7780842 -191849308 + LTR16A LTR ERVL 11 108 -342 2675 91 8 0 chr5 7780842 7781194 -191848956 + THE1A LTR MaLR 1 355 0 878 269 137 28 chr5 7781194 7781477 -191848673 + LTR16A LTR ERVL 108 447 -3 184 121 61 0 chr5 7782537 7782570 -191847580 - L3b LINE CR1 -113 1470 1436 1932 265 34 27 chr5 7784025 7784649 -191845501 + MLT1E3 LTR MaLR 5 620 -4 28 61 0 0 chr5 7784700 7784749 -191845401 + AT_rich Low_complexity Low_complexity 1 49 0 377 223 158 7 chr5 7784813 7784952 -191845198 - LTR33 LTR ERVL -69 452 293 1415 170 30 102 chr5 7786576 7786970 -191843180 + L1MD3 LINE L1 6804 7169 -826 2401 112 0 0 chr5 7786971 7787283 -191842867 + AluSx SINE Alu 1 312 0 795 231 36 12 chr5 7787283 7787530 -191842620 + L1 LINE L1 3776 4028 -2118 260 150 0 0 chr5 7787615 7787655 -191842495 + Alu SINE Alu 251 290 -10 315 300 0 0 chr5 7787674 7787764 -191842386 - L1MC4 LINE L1 -1339 6703 6614 2107 231 28 36 chr5 7787764 7788424 -191841726 + L1MD3 LINE L1 7108 7948 -34 189 0 0 0 chr5 7789925 7789946 -191840204 + (A)n Simple_repeat Simple_repeat 1 21 0 300 349 88 51 chr5 7792081 7792849 -191837301 + L1MEd LINE L1 48 844 -5275 2948 6 0 0 chr5 7793603 7793914 -191836236 - AluYa5 SINE Alu 0 311 1 235 308 19 28 chr5 7793945 7794052 -191836098 + MIR SINE MIR 97 202 -60 1797 71 0 8 chr5 7794081 7794320 -191835830 - L1PA6 LINE L1 -212 5942 5706 303 143 0 0 chr5 7794299 7794348 -191835802 + L1PA12 LINE L1 6120 6168 0 * 234 128 0 0 chr5 7794512 7794551 -191835599 + (CA)n Simple_repeat Simple_repeat 2 40 0 521 256 32 78 chr5 7794609 7794953 -191835197 + L1MEd LINE L1 908 1235 -4884 476 186 8 0 chr5 7795627 7795745 -191834405 + GA-rich Low_complexity Low_complexity 2 120 0 766 295 48 63 chr5 7795842 7796255 -191833895 + L1MCb LINE L1 1 407 -5638 1413 203 52 0 chr5 7796267 7796538 -191833612 + L1PB4 LINE L1 5869 6153 -3 3982 236 67 32 chr5 7796712 7799393 -191830757 + L1MCb LINE L1 569 3406 -3158 2628 177 107 169 chr5 7799554 7800005 -191830145 + L1MC3 LINE L1 6739 7216 -569 403 228 54 0 chr5 7800005 7800097 -191830053 + MLT1C LTR MaLR 35 131 -436 2628 177 107 169 chr5 7800097 7800668 -191829482 + L1MC3 LINE L1 7216 7783 -2 1866 121 0 4 chr5 7800733 7800990 -191829160 - AluSg SINE Alu -13 297 42 712 218 155 35 chr5 7800990 7801296 -191828854 - Zaphod DNA AcHobo -756 3275 2928 1282 246 53 40 chr5 7801416 7801499 -191828651 - Zaphod DNA AcHobo -1529 2502 2422 957 163 0 27 chr5 7801499 7801683 -191828467 - L1MA9 LINE L1 0 6312 6134 1282 246 53 40 chr5 7801683 7801791 -191828359 - Zaphod DNA AcHobo -1609 2422 2317 2478 91 0 0 chr5 7801791 7802100 -191828050 - AluY SINE Alu -2 309 1 1282 246 53 40 chr5 7802100 7802412 -191827738 - Zaphod DNA AcHobo -1714 2317 1991 234 233 33 0 chr5 7802462 7802522 -191827628 - Zaphod DNA AcHobo -2049 1982 1921 232 295 98 8 chr5 7802652 7802774 -191827376 - MIR SINE MIR -4 258 126 493 193 283 0 chr5 7803289 7803434 -191826716 - MER53 DNA DNA 0 189 4 261 0 0 0 chr5 7803692 7803721 -191826429 + (TTCA)n Simple_repeat Simple_repeat 4 32 0 2040 189 23 25 chr5 7803747 7804180 -191825970 + Tigger2a DNA MER2_type 3 434 0 1037 189 99 128 chr5 7804259 7804541 -191825609 + MLT1C LTR MaLR 37 303 -164 2041 107 0 4 chr5 7804541 7804811 -191825339 + AluSq SINE Alu 1 269 -44 1037 189 99 128 chr5 7804811 7804972 -191825178 + MLT1C LTR MaLR 303 467 0 478 209 55 0 chr5 7806093 7806203 -191823947 - L1MA9 LINE L1 -385 5927 5812 796 154 83 6 chr5 7806204 7806233 -191823917 + L1MA9 LINE L1 6122 6147 -165 324 0 0 0 chr5 7806233 7806269 -191823881 + (CA)n Simple_repeat Simple_repeat 1 36 0 189 0 0 0 chr5 7806268 7806289 -191823861 + (GA)n Simple_repeat Simple_repeat 2 22 0 * 796 154 83 6 chr5 7806269 7806428 -191823722 + L1MA9 LINE L1 6147 6303 -9 811 272 27 5 chr5 7807972 7808196 -191821954 + MLT1C LTR MaLR 239 467 0 270 179 0 0 chr5 7810560 7810616 -191819534 + GA-rich Low_complexity Low_complexity 3 58 0 2314 107 3 3 chr5 7811917 7812226 -191817924 + AluSx SINE Alu 1 309 -3 1682 174 102 6 chr5 7812272 7812605 -191817545 + MLT1A1 LTR MaLR 1 365 0 251 228 0 0 chr5 7813745 7813802 -191816348 + T-rich Low_complexity Low_complexity 1 57 0 1133 224 82 55 chr5 7814205 7814585 -191815565 - MLT1B LTR MaLR 0 390 1 23 0 0 0 chr5 7817582 7817605 -191812545 + AT_rich Low_complexity Low_complexity 1 23 0 253 277 229 5 chr5 7817696 7817884 -191812266 + L1MC/D LINE L1 5574 5803 -2005 319 351 11 0 chr5 7818169 7818263 -191811887 + MIR SINE MIR 158 252 -10 2068 105 3 20 chr5 7818369 7818664 -191811486 + AluSx SINE Alu 9 298 -14 216 0 0 0 chr5 7822182 7822206 -191807944 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 867 246 65 35 chr5 7822245 7822615 -191807535 - LTR37A LTR ERV1 -7 419 39 201 267 19 95 chr5 7823003 7823108 -191807042 + MIR3 SINE MIR 74 170 -38 477 278 237 0 chr5 7824535 7824729 -191805421 + MIR SINE MIR 13 252 -10 752 276 24 42 chr5 7825825 7826158 -191803992 - LTR16B LTR ERVL -137 327 1 188 238 64 87 chr5 7827432 7827604 -191802546 + MER5C DNA MER1_type 21 188 -136 1962 109 0 4 chr5 7828775 7829042 -191801108 + AluSx SINE Alu 1 266 -46 273 214 135 11 chr5 7829799 7829888 -191800262 + LTR16C LTR ERVL 389 488 -3 1968 139 121 67 chr5 7830239 7830643 -191799507 + MSTA LTR MaLR 3 428 0 9230 154 22 54 chr5 7830643 7832348 -191797802 + MSTA-int LTR MaLR 1 1651 0 1898 177 138 5 chr5 7832348 7832726 -191797424 + MSTA LTR MaLR 1 428 0 1545 178 3 51 chr5 7832810 7833130 -191797020 - AluJo SINE Alu 0 312 7 473 124 16 141 chr5 7834195 7834316 -191795834 + MER20 DNA MER1_type 109 214 -5 360 217 179 0 chr5 7834396 7834502 -191795648 + LTR40a LTR ERVL 395 519 0 532 231 75 0 chr5 7835471 7835605 -191794545 + MER58B DNA MER1_type 197 340 -1 338 151 87 3 chr5 7836910 7837004 -191793146 - MLT1G LTR MaLR -393 156 13 256 306 0 14 chr5 7837684 7837756 -191792394 + L2 LINE L2 3200 3270 -2 268 353 0 0 chr5 7838094 7838210 -191791940 + (CA)n Simple_repeat Simple_repeat 1 116 0 264 59 0 0 chr5 7838227 7838261 -191791889 + (CA)n Simple_repeat Simple_repeat 2 35 0 259 253 40 80 chr5 7838733 7838833 -191791317 - Charlie4 DNA MER1_type 0 1961 1867 2334 102 0 3 chr5 7838833 7839136 -191791014 + AluSx SINE Alu 1 302 -10 259 253 40 80 chr5 7839136 7839185 -191790965 - Charlie4 DNA MER1_type -94 1867 1818 286 330 134 0 chr5 7840373 7840567 -191789583 - MIR SINE MIR -21 241 22 1138 248 42 45 chr5 7840732 7841179 -191788971 + MLT1D LTR MaLR 1 446 -59 1827 186 0 3 chr5 7841183 7841484 -191788666 + AluJb SINE Alu 6 305 -7 306 145 126 58 chr5 7841697 7841811 -191788339 - MER34 LTR ERV1 -6 536 433 327 315 12 85 chr5 7841868 7842214 -191787936 + MLT1I LTR MaLR 98 392 -17 224 320 70 0 chr5 7842230 7842330 -191787820 - L2 LINE L2 -862 2452 2346 326 275 167 0 chr5 7842886 7843006 -191787144 - L1ME4a LINE L1 -207 5914 5775 2040 142 7 3 chr5 7843015 7843324 -191786826 - AluSg SINE Alu 0 310 1 826 78 93 16 chr5 7843460 7843589 -191786561 + MER85 DNA T2_type 1 139 0 471 188 6 0 chr5 7845157 7845250 -191784900 + Tigger4(Zombi) DNA MER2_type 1 97 -2634 477 241 85 51 chr5 7846331 7846528 -191783622 + MIR SINE MIR 15 223 -39 255 61 0 0 chr5 7847746 7847779 -191782371 + (TGGA)n Simple_repeat Simple_repeat 1 33 0 326 195 13 0 chr5 7847787 7847864 -191782286 + GA-rich Low_complexity Low_complexity 1 78 0 182 289 41 66 chr5 7848154 7848275 -191781875 + L2 LINE L2 2382 2499 -815 254 86 0 0 chr5 7848891 7848926 -191781224 - 5S rRNA rRNA -25 96 62 472 111 0 0 chr5 7848926 7848989 -191781161 + AluSc SINE Alu 155 217 -92 1190 229 28 76 chr5 7849441 7849912 -191780238 - MLT1C LTR MaLR -17 450 3 282 269 141 60 chr5 7850347 7850496 -191779654 + MIR3 SINE MIR 33 193 -15 1496 290 100 24 chr5 7853352 7854397 -191775753 + L1ME3A LINE L1 4964 6142 -28 633 248 135 66 chr5 7854398 7854788 -191775362 + MLT1D LTR MaLR 1 408 -59 590 119 0 12 chr5 7854791 7854875 -191775275 + AluS SINE Alu 2 84 -229 237 239 0 14 chr5 7854876 7854947 -191775203 + MLT1B LTR MaLR 321 390 0 219 210 43 70 chr5 7854984 7855056 -191775094 + MER5B DNA MER1_type 61 122 -56 383 360 77 31 chr5 7855211 7855731 -191774419 - L2 LINE L2 -2047 1267 724 1712 188 58 80 chr5 7857152 7857668 -191772482 - MLT1D LTR MaLR 0 505 1 4816 113 39 95 chr5 7858122 7859124 -191771026 + Tigger3b DNA MER2_type 2 947 -284 554 77 0 0 chr5 7859125 7859203 -191770947 - L1PA8 LINE L1 -1 6171 6094 1381 45 6 0 chr5 7859203 7859379 -191770771 + L1PA8A LINE L1 5689 5865 -266 1450 191 50 0 chr5 7859379 7859657 -191770493 + Tigger3b DNA MER2_type 940 1231 0 309 190 88 36 chr5 7862195 7862332 -191767818 + (TCTCTG)n Simple_repeat Simple_repeat 6 149 0 599 227 52 101 chr5 7862391 7862717 -191767433 + MLT1J LTR MaLR 138 447 -64 1144 252 61 48 chr5 7864504 7864895 -191765255 - MLT1C LTR MaLR 0 467 83 7311 18 0 0 chr5 7864895 7865717 -191764433 + L1PA3 LINE L1 5318 6139 -16 308 28 0 0 chr5 7865681 7865717 -191764433 + L1PA2 LINE L1 6104 6191 0 315 58 39 0 chr5 7865717 7865769 -191764381 + (TAAA)n Simple_repeat Simple_repeat 3 180 0 1144 252 61 48 chr5 7865769 7865832 -191764318 - MLT1C LTR MaLR -383 84 6 315 0 0 0 chr5 7865904 7865939 -191764211 + (CA)n Simple_repeat Simple_repeat 2 36 0 321 389 65 44 chr5 7868085 7868378 -191761772 - L2 LINE L2 -2 3270 2972 221 333 151 34 chr5 7868510 7868861 -191761289 - L2 LINE L2 -831 2483 2092 184 338 38 0 chr5 7868882 7868962 -191761188 - MER5A DNA MER1_type -100 89 7 246 285 58 44 chr5 7869050 7869187 -191760963 - L1MC/D LINE L1 -1959 5849 5711 1755 153 6 32 chr5 7869311 7869624 -191760526 + AluJo SINE Alu 3 307 -5 321 248 341 0 chr5 7870360 7870489 -191759661 + MIR SINE MIR 60 232 -30 1579 205 39 55 chr5 7872231 7872616 -191757534 + MLT1B LTR MaLR 1 379 -11 218 317 81 32 chr5 7872632 7872755 -191757395 - MER5A DNA MER1_type -26 163 35 226 284 63 0 chr5 7872801 7872896 -191757254 + MER5A DNA MER1_type 9 109 -80 270 309 90 71 chr5 7874519 7874930 -191755220 - L2 LINE L2 -24 3248 2830 200 265 193 12 chr5 7877668 7877751 -191752399 + MIR SINE MIR 50 147 -115 410 201 72 86 chr5 7878185 7878324 -191751826 + L2 LINE L2 3153 3289 -24 517 109 42 30 chr5 7879150 7879417 -191750733 + (CA)n Simple_repeat Simple_repeat 1 270 0 214 196 36 89 chr5 7881308 7881364 -191748786 + MIR3 SINE MIR 136 188 -20 2069 113 20 0 chr5 7881521 7881813 -191748337 + AluSx SINE Alu 1 298 -14 209 224 0 17 chr5 7882042 7882100 -191748050 + A-rich Low_complexity Low_complexity 4 60 0 2029 162 31 0 chr5 7882129 7882487 -191747663 + L1M2 LINE L1 5280 5648 -643 1890 135 3 33 chr5 7882488 7882844 -191747306 - MER4A LTR ERV1 0 664 261 629 101 10 20 chr5 7882844 7882943 -191747207 - MER4A LTR ERV1 -566 98 1 291 119 0 0 chr5 7882943 7882985 -191747165 + L1M2 LINE L1 5646 5687 -604 3542 109 35 7 chr5 7882985 7883524 -191746626 - MER41A LTR ERV1 0 554 1 298 62 0 0 chr5 7883526 7883574 -191746576 + L1MA7 LINE L1 6244 6291 0 233 29 0 29 chr5 7883676 7883711 -191746439 + (TTAA)n Simple_repeat Simple_repeat 3 36 0 685 319 91 45 chr5 7884035 7884593 -191745557 + L1M4 LINE L1 2311 2894 -3252 434 213 0 21 chr5 7884624 7884718 -191745432 - MER94 DNA DNA -42 92 1 463 280 118 40 chr5 7885001 7885526 -191744624 + L1M4 LINE L1 3196 3761 -2385 680 252 19 0 chr5 7885540 7885699 -191744451 - MLT1G1 LTR MaLR -5 590 429 562 254 157 14 chr5 7885728 7886006 -191744144 - MLT1G1 LTR MaLR -251 344 27 1765 124 58 19 chr5 7886006 7886531 -191743619 - MER4A LTR ERV1 -1 663 1 502 272 37 88 chr5 7886583 7886755 -191743395 + L1M4 LINE L1 3791 3945 -2201 2097 95 3 0 chr5 7886755 7887033 -191743117 + AluSc SINE Alu 1 282 -27 189 94 0 0 chr5 7887033 7887065 -191743085 + (TTAAA)n Simple_repeat Simple_repeat 4 35 0 502 272 37 88 chr5 7887071 7887170 -191742980 + L1M4 LINE L1 3945 4048 -2098 1274 221 39 13 chr5 7887223 7887531 -191742619 - MLT1C LTR MaLR -151 316 1 2300 85 0 3 chr5 7887763 7888068 -191742082 + AluSc SINE Alu 1 304 -5 315 150 0 0 chr5 7888670 7888730 -191741420 + (ATG)n Simple_repeat Simple_repeat 3 62 0 212 0 36 0 chr5 7889260 7889288 -191740862 + (TTG)n Simple_repeat Simple_repeat 2 30 0 823 269 83 74 chr5 7889909 7890366 -191739784 - LTR16B LTR ERVL -3 461 1 351 0 0 0 chr5 7890384 7890423 -191739727 + (ATG)n Simple_repeat Simple_repeat 1 39 0 322 303 79 20 chr5 7890424 7890576 -191739574 - MIR SINE MIR -12 250 90 2703 3 0 13 chr5 7890822 7891134 -191739016 + AluYa5 SINE Alu 1 308 -3 2271 179 33 0 chr5 7891322 7891710 -191738440 + LTR39 LTR ERV1 1 401 -382 365 98 43 174 chr5 7891710 7891802 -191738348 + MADE1 DNA Mariner 1 80 0 1608 240 49 3 chr5 7891802 7892169 -191737981 + LTR39 LTR ERV1 400 783 0 182 348 0 0 chr5 7892218 7892264 -191737886 + L2 LINE L2 3210 3255 -17 2404 118 24 21 chr5 7893059 7893433 -191736717 + THE1C LTR MaLR 1 375 0 719 187 99 33 chr5 7893598 7893780 -191736370 + MER3 DNA MER1_type 11 204 -5 824 265 28 14 chr5 7893941 7894156 -191735994 + MIR SINE MIR 1 218 -44 203 246 271 16 chr5 7894388 7894510 -191735640 + L2 LINE L2 3117 3269 -3 1677 191 34 96 chr5 7894797 7895182 -191734968 - MLT1D LTR MaLR -6 499 154 1695 167 141 26 chr5 7895182 7895566 -191734584 + MSTA LTR MaLR 1 428 0 1677 191 34 96 chr5 7895566 7895710 -191734440 - MLT1D LTR MaLR -351 154 3 230 220 40 0 chr5 7896798 7896848 -191733302 - MLT1I LTR MaLR -130 279 228 483 260 68 56 chr5 7897749 7897918 -191732232 + MER46C DNA MER2_type 81 255 -83 1955 164 72 18 chr5 7897918 7898307 -191731843 - MLT2D LTR ERVL -4 410 1 483 260 68 56 chr5 7898307 7898387 -191731763 + MER46C DNA MER2_type 255 333 -5 334 263 91 0 chr5 7899176 7899275 -191730875 - MIR SINE MIR -69 193 86 997 238 124 46 chr5 7899438 7899850 -191730300 + MLT1C LTR MaLR 22 465 -2 279 239 57 34 chr5 7900581 7900669 -191729481 + MLT1I LTR MaLR 190 279 -130 186 189 0 0 chr5 7900967 7901004 -191729146 + (TATATG)n Simple_repeat Simple_repeat 2 38 0 274 196 0 0 chr5 7901012 7901068 -191729082 - L1MC4 LINE L1 -1339 6703 6648 231 257 0 0 chr5 7901880 7901981 -191728169 + (TG)n Simple_repeat Simple_repeat 2 102 0 304 342 40 27 chr5 7902478 7902700 -191727450 - HAL1 LINE L1 -37 2470 2246 1102 308 139 35 chr5 7902906 7904175 -191725975 - HAL1 LINE L1 -354 2153 753 345 259 22 45 chr5 7904834 7904956 -191725194 - MIR3 SINE MIR -21 187 66 1258 232 30 46 chr5 7904994 7905364 -191724786 - MLT1A1 LTR MaLR -1 364 1 320 331 79 16 chr5 7905721 7905848 -191724302 - MIR3 SINE MIR -8 200 66 869 148 49 12 chr5 7906488 7906650 -191723500 + FRAM SINE Alu 1 165 -11 1968 114 3 20 chr5 7906713 7907011 -191723139 - AluSx SINE Alu -19 293 1 261 327 26 9 chr5 7907422 7907535 -191722615 + MIR3 SINE MIR 90 204 -4 213 20 0 102 chr5 7907615 7907664 -191722486 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 320 193 0 60 chr5 7910222 7910305 -191719845 + MLT1F1 LTR MaLR 55 132 -435 1937 206 63 20 chr5 7910305 7910611 -191719539 + L1MD3 LINE L1 7416 7752 -243 1305 199 15 103 chr5 7910611 7911009 -191719141 + MLT1A1 LTR MaLR 1 363 -2 1937 206 63 20 chr5 7911009 7911191 -191718959 + L1MD3 LINE L1 7752 7925 -70 378 162 0 0 chr5 7911275 7911343 -191718807 + L1MD3 LINE L1 7928 7995 0 185 195 0 24 chr5 7911925 7911966 -191718184 - L2 LINE L2 -3147 167 128 676 228 17 6 chr5 7913069 7913249 -191716901 + MER5A DNA MER1_type 4 185 -4 390 312 40 40 chr5 7913287 7913460 -191716690 - MER5B DNA MER1_type -5 173 1 256 267 95 95 chr5 7914292 7914513 -191715637 + L2 LINE L2 3014 3234 -38 21 0 0 0 chr5 7915141 7915162 -191714988 + AT_rich Low_complexity Low_complexity 1 21 0 866 264 47 12 chr5 7915176 7915520 -191714630 - L1MC4 LINE L1 0 8042 7687 21 0 0 0 chr5 7915548 7915569 -191714581 + AT_rich Low_complexity Low_complexity 1 21 0 1261 159 25 107 chr5 7915577 7915904 -191714246 - AluYb8 SINE Alu -18 300 1 192 135 0 0 chr5 7916073 7916110 -191714040 + (TTTTTG)n Simple_repeat Simple_repeat 6 42 0 200 282 55 55 chr5 7916422 7916532 -191713618 - MIR SINE MIR -139 123 14 1272 209 147 34 chr5 7916588 7916995 -191713155 - MLT1C LTR MaLR -9 458 6 525 182 20 0 chr5 7917000 7917099 -191713051 - MLT2C1 LTR ERVL -293 104 4 207 273 91 23 chr5 7918441 7918529 -191711621 + MIR SINE MIR 35 128 -80 209 256 0 0 chr5 7918555 7918598 -191711552 + MIR SINE MIR 86 128 -80 744 128 105 45 chr5 7919269 7919402 -191710748 + MER1B DNA MER1_type 1 141 -156 513 118 0 0 chr5 7919402 7919470 -191710680 + MER1B DNA MER1_type 74 141 -156 1594 141 23 19 chr5 7919470 7919733 -191710417 + MER1B DNA MER1_type 74 337 -2 200 293 40 13 chr5 7920017 7920092 -191710058 + L3 LINE CR1 460 536 -1041 306 145 24 76 chr5 7920671 7920789 -191709361 + MER20 DNA MER1_type 5 157 -62 207 0 0 0 chr5 7920791 7920814 -191709336 + (CACCC)n Simple_repeat Simple_repeat 2 24 0 1469 166 28 110 chr5 7921673 7922100 -191708050 - MLT1B LTR MaLR 0 505 1 995 208 55 128 chr5 7923186 7923346 -191706804 + MLT1C LTR MaLR 8 178 -289 2180 101 10 0 chr5 7923346 7923652 -191706498 + AluSc SINE Alu 1 309 0 995 208 55 128 chr5 7923652 7923982 -191706168 + MLT1C LTR MaLR 178 462 -5 728 119 8 0 chr5 7924114 7924232 -191705918 + (GGAA)n Simple_repeat Simple_repeat 2 120 0 210 37 0 0 chr5 7924226 7924253 -191705897 + (GAAAA)n Simple_repeat Simple_repeat 4 30 0 * 1914 117 14 0 chr5 7924264 7924546 -191705604 + AluSc SINE Alu 9 294 -15 1895 102 0 38 chr5 7924619 7924956 -191705194 - AluY SINE Alu 0 326 1 259 254 79 79 chr5 7926153 7926318 -191703832 - MER5B DNA MER1_type -7 171 7 218 217 0 17 chr5 7926365 7926425 -191703725 + CT-rich Low_complexity Low_complexity 3 61 0 763 119 23 28 chr5 7926451 7926627 -191703523 + CT-rich Low_complexity Low_complexity 2 176 0 1682 172 0 0 chr5 7927564 7927873 -191702277 + AluJo SINE Alu 5 313 0 328 266 40 102 chr5 7928079 7928256 -191701894 - L1MC4 LINE L1 -1338 6704 6539 265 279 0 0 chr5 7928283 7928351 -191701799 + (TGGA)n Simple_repeat Simple_repeat 3 70 0 1982 128 3 0 chr5 7928410 7928707 -191701443 + AluSx SINE Alu 1 298 -14 742 175 139 0 chr5 7928975 7929112 -191701038 + AluJb SINE Alu 31 186 -126 986 243 9 0 chr5 7929231 7929441 -191700709 + MER20 DNA MER1_type 2 213 -6 260 253 126 0 chr5 7929567 7929654 -191700496 - MIR SINE MIR -72 190 93 276 200 0 0 chr5 7930151 7930211 -191699939 + GA-rich Low_complexity Low_complexity 2 61 0 5259 130 19 50 chr5 7930369 7930608 -191699542 - L1MA5A LINE L1 -5 6292 6047 2030 143 18 21 chr5 7930608 7930943 -191699207 + MER1B DNA MER1_type 4 337 0 5259 130 19 50 chr5 7930943 7931198 -191698952 - L1MA5A LINE L1 -250 6047 5786 1746 117 0 4 chr5 7931198 7931455 -191698695 - AluSx SINE Alu -18 294 39 5259 130 19 50 chr5 7931455 7931906 -191698244 - L1MA5A LINE L1 -511 5786 5375 185 300 67 33 chr5 7932743 7932863 -191697287 - L2 LINE L2 -19 3294 3171 1096 178 6 10 chr5 7933391 7933733 -191696417 - MLT1B LTR MaLR 0 390 1 2192 101 0 0 chr5 7935065 7935361 -191694789 - AluSx SINE Alu -16 296 1 285 29 0 0 chr5 7936890 7936924 -191693226 + (TC)n Simple_repeat Simple_repeat 1 34 0 2419 222 30 29 chr5 7937348 7937973 -191692177 + L1ME2 LINE L1 5535 6160 -4 1992 128 0 10 chr5 7937997 7938295 -191691855 - AluSx SINE Alu -17 295 1 866 142 64 0 chr5 7939179 7939320 -191690830 + FRAM SINE Alu 1 146 -30 25 31 0 0 chr5 7939330 7939362 -191690788 + AT_rich Low_complexity Low_complexity 1 32 0 2002 101 0 14 chr5 7939380 7939656 -191690494 - AluSx SINE Alu -40 272 1 29 0 0 0 chr5 7940073 7940102 -191690048 + AT_rich Low_complexity Low_complexity 1 29 0 293 374 20 20 chr5 7940213 7940416 -191689734 + ERVL LTR ERVL 429 631 -5133 368 274 226 12 chr5 7940871 7941035 -191689115 + MLT1J LTR MaLR 1 199 -312 252 301 96 20 chr5 7941332 7941478 -191688672 - MER117 DNA MER1_type -37 160 4 655 248 125 80 chr5 7941670 7942110 -191688040 - LTR67 LTR ERVL 0 557 98 310 233 0 14 chr5 7942134 7942207 -191687943 - MLT1G3 LTR MaLR 0 567 496 6257 134 29 2 chr5 7942209 7942321 -191687829 - L1PA14 LINE L1 -2 6159 6052 2629 99 0 25 chr5 7942321 7942685 -191687465 - THE1A LTR MaLR 0 355 1 6257 134 29 2 chr5 7942685 7944488 -191685662 - L1PA14 LINE L1 -109 6052 4144 1066 243 125 33 chr5 7944536 7944979 -191685171 - MLT1G3 LTR MaLR -61 469 4 229 299 0 26 chr5 7945097 7945174 -191684976 + C-rich Low_complexity Low_complexity 1 75 0 218 306 74 25 chr5 7945221 7945342 -191684808 + MIR3 SINE MIR 30 156 -52 782 306 31 5 chr5 7945576 7945798 -191684352 + MIR SINE MIR 13 240 -22 430 215 145 50 chr5 7946859 7947101 -191683049 - L1ME4a LINE L1 -137 5984 5720 1817 114 0 43 chr5 7947226 7947565 -191682585 - AluSx SINE Alu 0 340 14 220 281 116 42 chr5 7947918 7948101 -191682049 + MIR SINE MIR 17 208 -48 257 50 0 25 chr5 7948206 7948246 -191681904 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 795 48 59 12 chr5 7948788 7949183 -191680967 + (CA)n Simple_repeat Simple_repeat 1 413 0 677 94 48 27 chr5 7949203 7949729 -191680421 + (CA)n Simple_repeat Simple_repeat 1 537 0 194 0 0 37 chr5 7950064 7950091 -191680059 + (TTCG)n Simple_repeat Simple_repeat 4 29 0 38 68 0 0 chr5 7950139 7950212 -191679938 + GC_rich Low_complexity Low_complexity 1 73 0 21 36 0 0 chr5 7950610 7950638 -191679512 + GC_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr5 7950652 7950676 -191679474 + GC_rich Low_complexity Low_complexity 1 24 0 326 330 0 58 chr5 7950919 7951110 -191679040 + C-rich Low_complexity Low_complexity 1 180 0 289 303 9 28 chr5 7952489 7952598 -191677552 - MIR3 SINE MIR 0 208 102 25 0 0 0 chr5 7953687 7953712 -191676438 + AT_rich Low_complexity Low_complexity 1 25 0 184 167 44 167 chr5 7954543 7954633 -191675517 - MIR SINE MIR -120 142 64 243 152 0 0 chr5 7955051 7955097 -191675053 + (CA)n Simple_repeat Simple_repeat 1 46 0 1823 141 7 7 chr5 7955245 7955535 -191674615 - AluJo SINE Alu -22 290 1 1787 133 14 30 chr5 7955563 7955903 -191674247 - MLT1B LTR MaLR 0 390 1 482 276 41 29 chr5 7956881 7957051 -191673099 - MER5B DNA MER1_type 0 178 7 193 226 123 66 chr5 7957427 7957533 -191672617 - L2 LINE L2 -23 3290 3179 559 258 16 63 chr5 7958919 7959109 -191671041 - MIR SINE MIR -19 243 63 1538 212 76 42 chr5 7960866 7961314 -191668836 - Charlie4a DNA MER1_type -42 466 4 186 281 152 47 chr5 7961502 7961673 -191668477 + MIR SINE MIR 64 252 -10 2332 53 0 0 chr5 7964951 7965279 -191664871 - AluY SINE Alu 0 328 1 808 88 0 18 chr5 7965327 7965441 -191664709 - AluSp/q SINE Alu -17 296 185 1931 144 3 0 chr5 7966334 7966633 -191663517 - AluSx SINE Alu -6 306 7 269 326 0 0 chr5 7967342 7967428 -191662722 + CT-rich Low_complexity Low_complexity 1 86 0 237 111 0 63 chr5 7968504 7968567 -191661583 + (TCCC)n Simple_repeat Simple_repeat 2 60 0 1771 171 45 19 chr5 7968609 7968983 -191661167 - MLT1B LTR MaLR -3 387 4 262 219 42 0 chr5 7970712 7970808 -191659342 + (TA)n Simple_repeat Simple_repeat 1 100 0 310 267 0 40 chr5 7970848 7970949 -191659201 + L1MC4 LINE L1 6608 6704 -1338 188 322 0 78 chr5 7971149 7971239 -191658911 - L3 LINE CR1 -1139 438 356 195 184 0 0 chr5 7971850 7971888 -191658262 + (CA)n Simple_repeat Simple_repeat 2 39 0 448 246 62 61 chr5 7972148 7972314 -191657836 - L1ME LINE L1 -455 5666 5495 1480 231 73 31 chr5 7972565 7973108 -191657042 - MLT1F1 LTR MaLR -1 566 1 435 373 97 35 chr5 7973776 7974572 -191655578 - L1ME LINE L1 -764 5382 4657 384 148 59 2 chr5 7974802 7974891 -191655259 - MLT1J2 LTR MaLR -309 141 68 210 333 114 40 chr5 7975768 7975969 -191654181 + MIR SINE MIR 21 236 -26 243 328 113 41 chr5 7976176 7976371 -191653779 + MIR SINE MIR 22 230 -32 485 327 23 32 chr5 7981521 7981738 -191648412 + MIR SINE MIR 16 230 -32 1500 228 85 7 chr5 7983259 7983684 -191646466 + MLT1C LTR MaLR 6 463 -4 554 243 36 0 chr5 7983945 7984085 -191646065 + MER20 DNA MER1_type 7 151 -68 2175 105 0 10 chr5 7984497 7984801 -191645349 + AluSx SINE Alu 1 301 -11 329 354 0 19 chr5 7986373 7986534 -191643616 + (CA)n Simple_repeat Simple_repeat 1 158 0 837 266 19 9 chr5 7987394 7987608 -191642542 - MIR SINE MIR 0 262 47 326 91 18 0 chr5 7987642 7987697 -191642453 + (CA)n Simple_repeat Simple_repeat 2 57 0 262 369 110 28 chr5 7987737 7988054 -191642096 + L2 LINE L2 2929 3271 -1 971 216 53 0 chr5 7988100 7988308 -191641842 + MER20 DNA MER1_type 1 219 0 189 74 0 0 chr5 7988432 7988459 -191641691 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 1593 169 23 36 chr5 7989858 7990166 -191639984 + AluJo SINE Alu 1 304 -8 1724 140 20 3 chr5 7990495 7990788 -191639362 + AluJo SINE Alu 12 309 -3 256 228 18 0 chr5 7995831 7995888 -191634262 + MIR SINE MIR 82 139 -69 2102 129 67 14 chr5 7999350 7999706 -191630444 + THE1C LTR MaLR 1 375 0 533 171 7 110 chr5 8001431 8001502 -191628648 + MLT1C LTR MaLR 337 414 -53 206 32 32 0 chr5 8001502 8001533 -191628617 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1718 94 109 8 chr5 8001538 8001794 -191628356 - AluSc SINE Alu -27 282 1 533 171 7 110 chr5 8001794 8001862 -191628288 + MLT1C LTR MaLR 418 467 0 700 123 0 15 chr5 8002558 8002688 -191627462 + (TGGA)n Simple_repeat Simple_repeat 2 129 0 1158 133 4 4 chr5 8002701 8002944 -191627206 + (TGGA)n Simple_repeat Simple_repeat 1 243 0 1605 213 79 86 chr5 8004496 8005068 -191625082 + MLT1E1 LTR MaLR 63 630 -24 2290 86 3 3 chr5 8005080 8005384 -191624766 - L1PB1 LINE L1 -5 6146 5843 236 259 0 0 chr5 8005385 8005439 -191624711 + MLT1E3 LTR MaLR 554 607 -17 3525 121 11 15 chr5 8005804 8006333 -191623817 - MER1A DNA MER1_type 0 527 1 644 264 85 59 chr5 8007484 8008129 -191622021 + L1MEc LINE L1 863 1524 -4872 1963 108 7 27 chr5 8008154 8008449 -191621701 + AluSx SINE Alu 1 289 -23 738 259 145 55 chr5 8008599 8009328 -191620822 + L1MEc LINE L1 3250 4044 -2171 261 270 15 44 chr5 8009361 8009498 -191620652 + L1ME3A LINE L1 6038 6170 0 210 185 37 19 chr5 8009984 8010092 -191620058 + (TG)n Simple_repeat Simple_repeat 1 110 0 247 235 17 43 chr5 8010101 8010256 -191619894 + (TATTG)n Simple_repeat Simple_repeat 1 150 0 311 323 36 52 chr5 8010274 8010632 -191619518 + L3 LINE CR1 1094 1490 -87 378 138 90 2 chr5 8011676 8011774 -191618376 + L1ME3A LINE L1 5689 5802 -376 1576 179 113 24 chr5 8011781 8012116 -191618034 - MLT1A1 LTR MaLR 0 365 1 952 254 12 75 chr5 8012116 8012218 -191617932 + L1ME3A LINE L1 5805 5912 -258 2448 43 3 13 chr5 8012218 8012521 -191617629 + AluY SINE Alu 1 300 -11 952 254 12 75 chr5 8012521 8012590 -191617560 + L1ME3A LINE L1 5912 5984 -186 2535 105 18 37 chr5 8012590 8012813 -191617337 - THE1C LTR MaLR 0 375 160 2121 113 0 0 chr5 8012813 8013105 -191617045 + AluSx SINE Alu 3 294 -18 2535 105 18 37 chr5 8013105 8013263 -191616887 - THE1C LTR MaLR -215 160 1 952 254 12 75 chr5 8013263 8013424 -191616726 + L1ME3A LINE L1 5984 6117 -53 306 228 43 33 chr5 8013606 8013698 -191616452 - MIR3 SINE MIR 0 208 116 637 256 12 18 chr5 8013746 8013910 -191616240 + MER5B DNA MER1_type 1 163 -15 192 346 140 37 chr5 8014609 8014823 -191615327 - MIR SINE MIR -19 243 8 2146 154 15 62 chr5 8015188 8015654 -191614496 + MER65A LTR ERV1 1 444 -1 1007 196 50 23 chr5 8015722 8015982 -191614168 + L1MB4 LINE L1 5914 6180 0 225 319 146 21 chr5 8016464 8016608 -191613542 - L2 LINE L2 -1870 1444 1283 258 136 0 0 chr5 8017367 8017411 -191612739 + (CA)n Simple_repeat Simple_repeat 1 44 0 695 236 154 5 chr5 8017430 8017625 -191612525 - MER58A DNA MER1_type 0 224 1 432 193 44 44 chr5 8017630 8017765 -191612385 + L1ME4a LINE L1 5982 6116 -5 769 189 43 49 chr5 8018739 8018924 -191611226 - MER20 DNA MER1_type 0 219 36 392 220 347 0 chr5 8019316 8019466 -191610684 + Charlie8 DNA MER1_type 70 271 -2146 430 296 58 32 chr5 8019761 8019950 -191610200 + MIR3 SINE MIR 12 205 -3 781 257 61 14 chr5 8019952 8020166 -191609984 - MER58A DNA MER1_type 0 224 1 493 243 90 7 chr5 8020290 8020434 -191609716 + L1MD2 LINE L1 6194 6349 -10 180 0 0 0 chr5 8020473 8020493 -191609657 + (TG)n Simple_repeat Simple_repeat 1 20 0 1859 153 0 0 chr5 8020493 8020821 -191609329 - AluJb SINE Alu 0 328 1 418 136 45 34 chr5 8021748 8021924 -191608226 + (CA)n Simple_repeat Simple_repeat 2 179 0 204 189 33 56 chr5 8021924 8022014 -191608136 + (CATA)n Simple_repeat Simple_repeat 1 88 0 375 154 47 24 chr5 8022014 8022183 -191607967 + (CA)n Simple_repeat Simple_repeat 2 174 0 255 333 30 30 chr5 8022664 8022796 -191607354 + MER5A DNA MER1_type 44 175 -14 2301 172 66 48 chr5 8023325 8023826 -191606324 - MLT2B2 LTR ERVL 0 515 6 2128 100 30 0 chr5 8023939 8024240 -191605910 - AluSx SINE Alu -2 310 1 549 305 69 24 chr5 8024240 8024486 -191605664 + L1ME LINE L1 4303 4559 -1587 2034 102 3 11 chr5 8024902 8025227 -191604923 + AluSq SINE Alu 1 323 0 405 332 144 24 chr5 8025540 8025805 -191604345 + L1ME LINE L1 5313 5617 -547 2058 147 129 5 chr5 8025805 8026186 -191603964 - MSTC LTR MaLR 0 428 1 405 332 144 24 chr5 8026186 8026212 -191603938 + L1ME LINE L1 5617 5639 -525 1736 146 3 17 chr5 8026212 8026537 -191603613 + AluJo SINE Alu 1 312 0 831 188 27 80 chr5 8026563 8026787 -191603363 + MER20 DNA MER1_type 1 212 -7 371 220 26 63 chr5 8026791 8026934 -191603216 + L1P3 LINE L1 5645 5785 -369 505 172 0 11 chr5 8027503 8027590 -191602560 + AluJo SINE Alu 89 174 -138 2025 183 30 34 chr5 8027663 8028128 -191602022 - MLT1C LTR MaLR -2 465 3 2105 159 0 38 chr5 8028403 8028645 -191601505 - MLT1A1 LTR MaLR 0 365 140 2236 99 0 0 chr5 8028645 8028947 -191601203 + AluSc SINE Alu 1 302 -7 2105 159 0 38 chr5 8028947 8029074 -191601076 - MLT1A1 LTR MaLR -225 140 10 2269 87 0 13 chr5 8029582 8029891 -191600259 + AluSc SINE Alu 1 305 -4 384 191 56 0 chr5 8031560 8031649 -191598501 + L1M4 LINE L1 5250 5343 -803 325 261 105 39 chr5 8032337 8032490 -191597660 + LTR23 LTR ERV1 275 437 0 517 188 70 48 chr5 8032931 8033105 -191597045 - L1MB7 LINE L1 -31 6135 5942 862 279 14 41 chr5 8033109 8033471 -191596679 + L1M4 LINE L1 5410 5761 -417 231 329 168 7 chr5 8033716 8033865 -191596285 - MIR SINE MIR -78 184 12 1643 210 68 23 chr5 8034350 8034789 -191595361 + MLT1C LTR MaLR 8 466 -1 201 354 122 0 chr5 8035089 8035171 -191594979 + MIR SINE MIR 149 240 -22 227 215 15 0 chr5 8035633 8035698 -191594452 + (CA)n Simple_repeat Simple_repeat 2 67 0 204 302 35 86 chr5 8035811 8035927 -191594223 - L2 LINE L2 -194 3078 2969 376 238 166 0 chr5 8036389 8036540 -191593610 - MER91A DNA MER1_type -4 192 17 291 292 184 0 chr5 8037523 8037691 -191592459 + LTR53 LTR ERVL 3 201 -318 * 1584 232 84 9 chr5 8037689 8038116 -191592034 + MER68 LTR ERV1 104 562 0 2117 168 55 2 chr5 8038623 8039027 -191591123 - MSTB LTR MaLR 0 426 2 442 249 87 22 chr5 8039028 8039257 -191590893 + MER74B LTR ERVL 227 470 -152 1991 102 16 26 chr5 8039501 8039805 -191590345 + AluSg SINE Alu 1 301 -9 1510 159 73 14 chr5 8041565 8041854 -191588296 + AluJo SINE Alu 1 306 -6 689 183 15 8 chr5 8041948 8042079 -191588071 + MER47A DNA MER2_type 24 155 -211 2159 134 119 0 chr5 8042081 8042468 -191587682 - L1MA4 LINE L1 -262 6038 5606 540 230 79 0 chr5 8042471 8042623 -191587527 + L1MA4 LINE L1 6084 6247 -53 735 184 184 14 chr5 8042623 8042835 -191587315 + MER47A DNA MER2_type 119 366 0 1452 261 87 18 chr5 8043529 8043720 -191586430 + L1M4 LINE L1 2128 2304 -3842 330 67 0 0 chr5 8043720 8043765 -191586385 + (TA)n Simple_repeat Simple_repeat 1 45 0 1488 194 3 3 chr5 8043765 8044058 -191586092 - AluJb SINE Alu -3 309 17 1452 261 87 18 chr5 8044058 8044487 -191585663 + L1M4 LINE L1 2303 2792 -3354 1495 179 30 0 chr5 8044678 8044941 -191585209 - MSTB1 LTR MaLR -160 272 2 791 103 0 0 chr5 8045102 8045209 -191584941 + AluSg/x SINE Alu 191 297 -15 657 238 57 5 chr5 8045768 8045961 -191584189 - L1MD3 LINE L1 0 7995 7793 228 149 0 43 chr5 8045987 8046034 -191584116 + MLT1L LTR MaLR 567 611 -4 616 316 126 49 chr5 8046684 8047335 -191582815 + L1M4 LINE L1 3716 4416 -1730 1992 144 33 11 chr5 8047621 8047982 -191582168 - L1PA13 LINE L1 -1 6162 5794 19216 100 9 30 chr5 8048495 8051253 -191578897 + Charlie3 DNA MER1_type 1 2700 -10 269 267 6 0 chr5 8051328 8051504 -191578646 + (CA)n Simple_repeat Simple_repeat 1 177 0 439 311 0 16 chr5 8051542 8051725 -191578425 + (CA)n Simple_repeat Simple_repeat 1 180 0 264 291 0 0 chr5 8051765 8051940 -191578210 + (CA)n Simple_repeat Simple_repeat 2 176 0 1977 106 19 13 chr5 8052045 8052356 -191577794 + L1PA13 LINE L1 5847 6159 -4 417 288 128 49 chr5 8052940 8053166 -191576984 + MIR SINE MIR 17 260 -2 360 294 91 16 chr5 8054602 8054789 -191575361 + L3 LINE CR1 1066 1266 -311 366 302 72 29 chr5 8055845 8056222 -191573928 - L1MDa LINE L1 -3443 3097 2705 415 167 0 0 chr5 8056255 8056327 -191573823 + MER116 DNA Mariner 6 77 -3 278 239 71 16 chr5 8056344 8056505 -191573645 - L1MDa LINE L1 -3959 2581 2480 1049 153 36 31 chr5 8056650 8056846 -191573304 + MER3 DNA MER1_type 13 209 0 301 167 0 0 chr5 8056803 8056851 -191573299 - MER3 DNA MER1_type -119 90 43 * 597 318 135 56 chr5 8057034 8057762 -191572388 - L1MDa LINE L1 -833 2068 1137 186 143 0 0 chr5 8057806 8057841 -191572309 + (T)n Simple_repeat Simple_repeat 1 35 0 22 0 0 0 chr5 8058474 8058496 -191571654 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 8059250 8059272 -191570878 + AT_rich Low_complexity Low_complexity 1 22 0 379 270 50 0 chr5 8059509 8059609 -191570541 - MIR3 SINE MIR -4 204 100 254 323 38 70 chr5 8060193 8060379 -191569771 - MIR SINE MIR -37 225 46 297 256 185 31 chr5 8060425 8060620 -191569530 + L2 LINE L2 2828 3052 -220 2108 105 0 3 chr5 8062057 8062351 -191567799 + AluSx SINE Alu 1 293 -19 341 260 77 19 chr5 8063125 8063229 -191566921 + MIR SINE MIR 34 143 -119 207 197 13 26 chr5 8063878 8063954 -191566196 + (TATATG)n Simple_repeat Simple_repeat 3 77 0 461 319 24 0 chr5 8064222 8064391 -191565759 - MER63A DNA MER1_type -37 173 1 2406 219 56 26 chr5 8065039 8065692 -191564458 - L1ME1 LINE L1 -5 6230 5553 1975 123 0 38 chr5 8065692 8066009 -191564141 - AluSx SINE Alu -7 305 1 2406 219 56 26 chr5 8066009 8066048 -191564102 - L1ME1 LINE L1 -682 5553 5517 765 248 50 31 chr5 8066127 8066483 -191563667 - L1ME1 LINE L1 -3766 2480 2108 27 0 0 0 chr5 8067167 8067194 -191562956 + AT_rich Low_complexity Low_complexity 1 27 0 4707 54 7 3 chr5 8067194 8067772 -191562378 - L1PA5 LINE L1 -4 6150 5571 1276 270 101 24 chr5 8068064 8068560 -191561590 - MER90 LTR ERV1 0 614 81 231 105 35 53 chr5 8069138 8069195 -191560955 + A-rich Low_complexity Low_complexity 3 58 0 396 264 31 78 chr5 8069860 8070053 -191560097 + MLT1J2 LTR MaLR 267 450 0 244 198 238 8 chr5 8072769 8072895 -191557255 + LTR33A LTR ERVL 318 472 -51 2139 182 33 12 chr5 8073839 8074263 -191555887 + L1MC1 LINE L1 5899 6331 -2 198 174 0 0 chr5 8074478 8074524 -191555626 + (CA)n Simple_repeat Simple_repeat 1 46 0 478 317 79 72 chr5 8074647 8075092 -191555058 - L1 LINE L1 -817 5329 4882 302 280 68 49 chr5 8075115 8075379 -191554771 - L1 LINE L1 -1316 4830 4562 21 0 0 0 chr5 8075991 8076012 -191554138 + AT_rich Low_complexity Low_complexity 1 21 0 1247 232 69 12 chr5 8078311 8078630 -191551520 - MER58B DNA MER1_type -4 337 1 456 313 46 26 chr5 8078878 8079073 -191551077 - MIR SINE MIR 0 262 64 307 227 21 0 chr5 8080071 8080168 -191549982 + (CA)n Simple_repeat Simple_repeat 1 99 0 608 208 17 6 chr5 8080194 8080372 -191549778 + (CA)n Simple_repeat Simple_repeat 1 180 0 238 300 29 0 chr5 8080374 8080444 -191549706 + (CACG)n Simple_repeat Simple_repeat 1 72 0 393 250 17 0 chr5 8080444 8080616 -191549534 + (CA)n Simple_repeat Simple_repeat 1 175 0 190 255 21 0 chr5 8080638 8080732 -191549418 + (CA)n Simple_repeat Simple_repeat 1 96 0 1426 207 63 17 chr5 8081203 8081551 -191548599 + MLT2D LTR ERVL 1 364 -50 291 28 0 0 chr5 8081579 8081615 -191548535 + (TG)n Simple_repeat Simple_repeat 2 37 0 209 108 27 0 chr5 8081855 8081892 -191548258 + (TTGG)n Simple_repeat Simple_repeat 2 39 0 664 274 21 11 chr5 8083639 8083825 -191546325 + MIR SINE MIR 65 252 -10 223 255 0 0 chr5 8084421 8084472 -191545678 + A-rich Low_complexity Low_complexity 2 52 0 1677 177 76 0 chr5 8085003 8085319 -191544831 + MSTB LTR MaLR 87 426 0 392 55 103 7 chr5 8085515 8085660 -191544490 + (TA)n Simple_repeat Simple_repeat 1 159 0 517 248 15 7 chr5 8087216 8087353 -191542797 - LTR41 LTR ERVL -618 155 18 463 276 247 17 chr5 8087394 8087738 -191542412 - L2 LINE L2 -71 3242 2820 513 349 0 0 chr5 8087746 8087921 -191542229 + (TG)n Simple_repeat Simple_repeat 1 175 0 987 260 72 16 chr5 8088138 8088442 -191541708 - L2 LINE L2 -512 2802 2482 800 83 0 0 chr5 8092059 8092168 -191537982 - AluY SINE Alu -13 298 190 556 69 0 0 chr5 8092168 8092240 -191537910 - AluY SINE Alu -47 264 193 2150 28 47 0 chr5 8092240 8092494 -191537656 - AluY SINE Alu -44 267 2 371 178 122 11 chr5 8093197 8093287 -191536863 - MLT1J LTR MaLR 0 511 412 543 270 22 22 chr5 8093479 8093657 -191536493 - MLT1J LTR MaLR -330 181 4 1036 249 160 15 chr5 8093737 8094138 -191536012 - LTR40b LTR ERVL 0 462 4 189 281 104 21 chr5 8095041 8095137 -191535013 - MIR3 SINE MIR -28 180 77 502 283 83 86 chr5 8095269 8095690 -191534460 + L2 LINE L2 2848 3267 -5 473 245 64 56 chr5 8095860 8096063 -191534087 - MIR SINE MIR -55 207 3 184 246 290 14 chr5 8096430 8096568 -191533582 - MER5B DNA MER1_type 0 178 3 182 191 0 32 chr5 8097040 8097103 -191533047 + GA-rich Low_complexity Low_complexity 4 64 0 1430 160 9 4 chr5 8097183 8097414 -191532736 - AluSg/x SINE Alu -14 298 67 234 0 0 0 chr5 8097441 8097467 -191532683 + (CA)n Simple_repeat Simple_repeat 2 27 0 563 329 68 39 chr5 8098152 8098201 -191531949 - L1M4 LINE L1 -2970 3176 3130 2560 60 3 0 chr5 8098201 8098501 -191531649 + AluY SINE Alu 1 301 -10 563 329 68 39 chr5 8098501 8098864 -191531286 - L1M4 LINE L1 -3016 3130 2752 728 169 29 0 chr5 8098983 8099155 -191530995 + GA-rich Low_complexity Low_complexity 4 180 0 504 106 0 64 chr5 8099308 8099402 -191530748 - FLAM_A SINE Alu 0 142 55 235 299 39 24 chr5 8099657 8099784 -191530366 + MLT2F LTR ERVL 2 130 -533 487 240 76 55 chr5 8099818 8100093 -191530057 + MLT2F LTR ERVL 234 514 -149 634 192 41 7 chr5 8100542 8100688 -191529462 - MER20 DNA MER1_type -66 153 3 401 223 18 9 chr5 8101062 8101174 -191528976 + MER89 LTR ERV1 447 559 0 540 219 48 37 chr5 8101403 8101590 -191528560 - MER53 DNA DNA 0 189 1 527 245 82 55 chr5 8102302 8102559 -191527591 + LTR37B LTR ERV1 141 404 -64 2396 97 0 3 chr5 8102764 8103064 -191527086 + AluSg SINE Alu 1 299 -11 2555 65 10 0 chr5 8103066 8103374 -191526776 + AluY SINE Alu 1 311 0 190 0 67 0 chr5 8104113 8104143 -191526007 + (GAAAA)n Simple_repeat Simple_repeat 3 34 0 1695 191 13 34 chr5 8104262 8104632 -191525518 - MLT2C1 LTR ERVL -20 534 9 1074 183 0 11 chr5 8104636 8104822 -191525328 + AluJb SINE Alu 119 302 -10 2200 138 33 33 chr5 8106596 8106958 -191523192 - THE1B LTR MaLR 0 364 3 614 289 87 24 chr5 8107557 8107855 -191522295 - L1MC4a LINE L1 -1914 5894 5578 1383 220 79 86 chr5 8108399 8108971 -191521179 + MLT1E1 LTR MaLR 63 630 -24 2297 88 3 3 chr5 8108980 8109287 -191520863 - L1PB1 LINE L1 -2 6149 5843 225 259 0 0 chr5 8109288 8109342 -191520808 + MLT1E3 LTR MaLR 554 607 -17 1015 234 52 101 chr5 8109496 8109980 -191520170 - MLT1C LTR MaLR -2 465 6 183 42 0 0 chr5 8112226 8112250 -191517900 + (CAGCC)n Simple_repeat Simple_repeat 1 24 0 741 223 60 30 chr5 8112328 8112561 -191517589 + MLT1D LTR MaLR 8 247 -258 587 238 131 0 chr5 8112602 8112762 -191517388 + MLT1D LTR MaLR 325 505 0 1973 153 124 3 chr5 8112798 8113176 -191516974 + MSTA LTR MaLR 1 424 -4 216 307 98 42 chr5 8114565 8114964 -191515186 + L2 LINE L2 2647 3110 -203 1675 236 29 45 chr5 8115033 8115189 -191514961 - MER65B LTR ERV1 -22 509 352 2066 45 16 0 chr5 8115189 8115433 -191514717 - AluY SINE Alu -2 309 62 1675 236 29 45 chr5 8115433 8115713 -191514437 - MER65B LTR ERV1 -179 352 80 2510 118 47 35 chr5 8115713 8116136 -191514014 - MSTA LTR MaLR 0 428 1 1675 236 29 45 chr5 8116136 8116215 -191513935 - MER65B LTR ERV1 -451 80 1 1251 275 22 6 chr5 8116215 8116579 -191513571 - MER65B-int LTR ERV1 0 4871 4502 2190 110 0 42 chr5 8116669 8116947 -191513203 + AluSq SINE Alu 1 266 -47 2444 57 14 7 chr5 8116947 8117243 -191512907 + AluY SINE Alu 1 298 -13 2190 110 0 42 chr5 8117243 8117274 -191512876 + AluSq SINE Alu 266 297 -16 1315 257 81 19 chr5 8117596 8117966 -191512184 - MER65B-int LTR ERV1 -850 4021 3629 563 188 5 6 chr5 8117972 8118095 -191512055 - MER65-int LTR ERV1 -491 5772 4136 1479 243 57 81 chr5 8118104 8119528 -191510622 - MER65-int LTR ERV1 -1024 5574 2842 437 275 21 47 chr5 8119577 8119770 -191510380 - MER65-int LTR ERV1 -2866 3732 3545 381 247 50 44 chr5 8120067 8120416 -191509734 - MER65-int LTR ERV1 -1719 3161 2224 279 170 30 156 chr5 8120459 8120594 -191509556 - MER65-int LTR ERV1 -6402 1718 1601 2375 108 0 0 chr5 8120621 8120926 -191509224 + AluSq SINE Alu 1 305 -8 369 0 0 0 chr5 8120926 8120967 -191509183 + (TA)n Simple_repeat Simple_repeat 1 41 0 1556 85 9 9 chr5 8121147 8121371 -191508779 + L1PA10 LINE L1 5944 6167 -1 1245 213 98 90 chr5 8121371 8122186 -191507964 - MER65-int LTR ERV1 -2381 2490 725 872 234 49 16 chr5 8122186 8122430 -191507720 - MER34 LTR ERV1 -257 285 34 2304 98 46 52 chr5 8122928 8123294 -191506856 - THE1B LTR MaLR 0 364 1 1427 232 32 76 chr5 8123558 8124113 -191506037 - MER65B LTR ERV1 0 531 1 990 155 17 11 chr5 8124622 8124796 -191505354 + MER53 DNA DNA 2 176 -13 296 366 77 11 chr5 8126099 8126282 -191503868 + L3 LINE CR1 395 589 -988 479 350 10 10 chr5 8126423 8126617 -191503533 + L3 LINE CR1 655 848 -729 293 311 63 35 chr5 8126858 8127112 -191503038 + L1MEd LINE L1 30 290 -5829 834 225 87 42 chr5 8127900 8128255 -191501895 - MLT1A2 LTR MaLR 0 374 4 657 226 0 7 chr5 8128728 8128874 -191501276 - L1MB3 LINE L1 -3 6180 6036 1156 192 18 1 chr5 8128876 8129110 -191501040 - L1MB3 LINE L1 -211 5972 5734 2649 35 0 0 chr5 8129503 8129815 -191500335 + AluYb8 SINE Alu 6 317 -1 447 296 121 19 chr5 8129815 8130021 -191500129 + L3 LINE CR1 1340 1566 -11 275 318 11 0 chr5 8131228 8131316 -191498834 - MIR SINE MIR -80 182 94 1584 170 58 21 chr5 8131382 8131712 -191498438 + MLT2C2 LTR ERVL 1 342 -122 518 182 71 14 chr5 8131774 8131938 -191498212 + MLT2C2 LTR ERVL 202 414 0 1554 32 0 11 chr5 8132539 8132727 -191497423 + L1PA4 LINE L1 5969 6154 -1 24 0 0 0 chr5 8132767 8132791 -191497359 + AT_rich Low_complexity Low_complexity 1 24 0 917 321 118 0 chr5 8135059 8135408 -191494742 - MLT1J LTR MaLR -121 390 1 1067 105 15 90 chr5 8135446 8135548 -191494602 + MER2 DNA MER2_type 1 82 -263 1671 166 14 3 chr5 8135548 8135837 -191494313 + AluJb SINE Alu 1 292 -20 1067 105 15 90 chr5 8135837 8135934 -191494216 + MER2 DNA MER2_type 82 185 -160 613 193 14 0 chr5 8136661 8136806 -191493344 + CT-rich Low_complexity Low_complexity 3 149 0 2308 85 3 0 chr5 8138431 8138736 -191491414 + AluSp SINE Alu 1 306 -7 2785 150 21 2 chr5 8138787 8139259 -191490891 + MER41B LTR ERV1 155 635 0 505 207 17 9 chr5 8139259 8139375 -191490775 - MLT2C1 LTR ERVL -280 117 1 601 341 41 45 chr5 8139427 8139601 -191490549 - L1MB3 LINE L1 -767 5379 5537 206 61 0 30 chr5 8139601 8139634 -191490516 + (CCCCCA)n Simple_repeat Simple_repeat 4 35 0 601 341 41 45 chr5 8139634 8139957 -191490193 - L1MB3 LINE L1 -608 5538 5215 427 267 125 46 chr5 8140295 8140535 -191489615 - L1MB3 LINE L1 -1489 4657 4399 2168 102 23 3 chr5 8142463 8142767 -191487383 + AluSx SINE Alu 1 310 -2 1039 231 14 59 chr5 8143128 8143418 -191486732 + MLT2B1 LTR ERVL 1 277 -243 2277 146 32 53 chr5 8143484 8143916 -191486234 + Tigger2a DNA MER2_type 1 423 -11 236 130 0 111 chr5 8143933 8143987 -191486163 + MLT2B1 LTR ERVL 465 512 -8 359 323 93 0 chr5 8144081 8144242 -191485908 + MIR3 SINE MIR 20 195 -13 * 372 319 35 0 chr5 8144240 8144353 -191485797 + L2 LINE L2 3196 3312 -1 1081 124 15 0 chr5 8144365 8144695 -191485455 + (TGGA)n Simple_repeat Simple_repeat 1 336 0 913 285 171 34 chr5 8145853 8146537 -191483613 - L2 LINE L2 0 3313 2499 945 183 18 0 chr5 8146641 8146805 -191483345 - MER20 DNA MER1_type -3 216 50 2170 191 20 54 chr5 8146812 8147194 -191482956 + L1MB5 LINE L1 5696 6059 -115 2223 84 11 0 chr5 8147194 8147481 -191482669 + AluSq SINE Alu 3 292 -21 2170 191 20 54 chr5 8147481 8147594 -191482556 + L1MB5 LINE L1 6059 6174 0 359 224 0 0 chr5 8147619 8147686 -191482464 - MER20 DNA MER1_type -152 67 1 935 226 5 0 chr5 8148986 8149172 -191480978 + MLT1A2 LTR MaLR 1 187 -187 330 26 0 0 chr5 8149205 8149244 -191480906 + (CA)n Simple_repeat Simple_repeat 2 40 0 236 173 173 0 chr5 8149253 8149305 -191480845 + MLT1A2 LTR MaLR 178 238 -127 1218 259 69 16 chr5 8149727 8150159 -191479991 + MLT1C LTR MaLR 13 467 0 238 307 144 20 chr5 8150666 8150868 -191479282 + L2 LINE L2 255 481 -2833 1173 273 39 3 chr5 8150871 8151226 -191478924 - MER87 LTR ERV1 0 541 174 324 269 11 0 chr5 8151456 8151549 -191478601 + MER5A DNA MER1_type 13 106 -83 481 254 294 13 chr5 8151669 8152037 -191478113 + L2 LINE L2 1103 1581 -1733 1902 92 0 32 chr5 8152037 8152318 -191477832 - AluSx SINE Alu -7 305 34 2416 106 25 17 chr5 8153375 8153733 -191476417 + THE1C LTR MaLR 13 373 -2 233 320 124 0 chr5 8154300 8154397 -191475753 - MIR3 SINE MIR -94 114 6 489 75 118 11 chr5 8154817 8154910 -191475240 - L1MB8 LINE L1 -35 6143 6041 1032 254 42 37 chr5 8155028 8155084 -191475066 - L1MEc LINE L1 -2978 3237 3183 2003 126 0 10 chr5 8155084 8155394 -191474756 - AluSg SINE Alu -3 307 1 1032 254 42 37 chr5 8155394 8155531 -191474619 - L1MEc LINE L1 -3032 3183 3048 2193 124 52 22 chr5 8155531 8155895 -191474255 - THE1C LTR MaLR 0 375 1 1032 254 42 37 chr5 8155895 8156503 -191473647 - L1MEc LINE L1 -3167 3048 2445 1657 165 3 3 chr5 8156503 8156794 -191473356 + AluJb SINE Alu 19 309 -3 330 67 0 0 chr5 8156794 8156839 -191473311 + (TA)n Simple_repeat Simple_repeat 1 45 0 1032 254 42 37 chr5 8156839 8157148 -191473002 - L1MEc LINE L1 -3769 2446 2120 344 320 67 44 chr5 8157426 8158083 -191472067 + L1M4 LINE L1 3764 4435 -1711 420 300 90 45 chr5 8158265 8158549 -191471601 - L1ME4a LINE L1 -149 5972 5673 2423 126 8 13 chr5 8158578 8158952 -191471198 - L1PB3 LINE L1 -1 6153 5782 192 96 0 58 chr5 8158958 8159010 -191471140 + (TA)n Simple_repeat Simple_repeat 1 49 0 5379 177 22 4 chr5 8159010 8160659 -191469491 - L1PB3 LINE L1 -359 5795 4118 1669 170 20 20 chr5 8161114 8161420 -191468730 - AluJo SINE Alu -6 306 1 1518 158 82 7 chr5 8162509 8162788 -191467362 - AluJb SINE Alu -12 300 1 267 340 19 0 chr5 8163696 8163799 -191466351 - L2 LINE L2 -1 3312 3208 320 262 155 56 chr5 8165100 8165352 -191464798 + MLT1I LTR MaLR 110 386 -23 256 59 118 0 chr5 8165518 8165569 -191464581 + CT-rich Low_complexity Low_complexity 1 57 0 * 286 176 24 24 chr5 8165562 8165647 -191464503 + C-rich Low_complexity Low_complexity 3 87 0 1126 176 14 23 chr5 8165651 8165872 -191464278 - AluJo SINE Alu -24 288 70 231 108 0 0 chr5 8165898 8165924 -191464226 + (A)n Simple_repeat Simple_repeat 1 29 -8 2217 95 3 13 chr5 8165924 8166239 -191463911 + AluSx SINE Alu 1 312 0 231 108 0 0 chr5 8166239 8166249 -191463901 + (A)n Simple_repeat Simple_repeat 28 37 0 246 301 173 39 chr5 8167332 8167894 -191462256 + L2 LINE L2 2127 2763 -551 410 260 39 10 chr5 8168471 8168575 -191461575 - MIR SINE MIR -139 123 17 1256 245 29 56 chr5 8169299 8169756 -191460394 + MLT1J2 LTR MaLR 1 395 -14 388 247 0 0 chr5 8170327 8170408 -191459742 - MER20 DNA MER1_type -134 85 5 348 163 168 0 chr5 8170525 8170605 -191459545 + MLT1C LTR MaLR 8 99 -295 338 277 149 76 chr5 8170803 8171132 -191459018 + MLT1J LTR MaLR 109 461 -50 740 223 40 55 chr5 8171206 8171408 -191458742 + MLT1C LTR MaLR 53 251 -216 * 1063 220 160 60 chr5 8171407 8171876 -191458274 + MLT1H LTR MaLR 26 541 -8 316 326 67 17 chr5 8171940 8172118 -191458032 - MER5A DNA MER1_type -1 188 2 1910 142 0 0 chr5 8172337 8172619 -191457531 + AluSx SINE Alu 1 282 -30 230 116 0 0 chr5 8172656 8172699 -191457451 - LTR66 LTR ERVL -171 439 397 231 255 128 60 chr5 8172952 8173101 -191457049 - L2 LINE L2 -3 3310 3152 1570 166 53 111 chr5 8173101 8173589 -191456561 + MLT1C LTR MaLR 4 463 -4 924 256 130 38 chr5 8173626 8173923 -191456227 - L2 LINE L2 -238 3034 2766 2553 106 16 5 chr5 8173923 8174291 -191455859 - L1PA10 LINE L1 -2 6166 5795 924 256 130 38 chr5 8174291 8174566 -191455584 - L2 LINE L2 -506 2766 2418 21 57 0 0 chr5 8175723 8175758 -191454392 + GC_rich Low_complexity Low_complexity 1 35 0 225 65 0 0 chr5 8176000 8176031 -191454119 + (CCCCCG)n Simple_repeat Simple_repeat 3 33 0 198 0 0 0 chr5 8176099 8176121 -191454029 + (CCG)n Simple_repeat Simple_repeat 3 24 0 25 51 0 0 chr5 8176203 8176242 -191453908 + GC_rich Low_complexity Low_complexity 1 39 0 214 209 7 61 chr5 8176277 8176425 -191453725 + (CCG)n Simple_repeat Simple_repeat 1 140 0 249 33 0 0 chr5 8176473 8176503 -191453647 + (CCG)n Simple_repeat Simple_repeat 1 30 0 70 24 0 0 chr5 8176527 8176611 -191453539 + GC_rich Low_complexity Low_complexity 1 84 0 203 196 36 0 chr5 8176747 8176803 -191453347 + (CGG)n Simple_repeat Simple_repeat 1 58 0 220 125 97 28 chr5 8176807 8176879 -191453271 + (CCGCG)n Simple_repeat Simple_repeat 3 79 0 21 36 0 0 chr5 8176889 8176917 -191453233 + GC_rich Low_complexity Low_complexity 1 28 0 189 154 0 0 chr5 8176925 8176964 -191453186 + (TCG)n Simple_repeat Simple_repeat 2 40 0 300 290 113 46 chr5 8177218 8177501 -191452649 + L1MCa LINE L1 1994 2295 -4131 22 35 0 0 chr5 8177501 8177530 -191452620 + AT_rich Low_complexity Low_complexity 1 29 0 2642 172 186 122 chr5 8177532 8178073 -191452077 - L1MC3 LINE L1 -19 7766 7261 275 279 48 19 chr5 8178073 8178177 -191451973 - MLT1F1 LTR MaLR -426 141 35 2642 172 186 122 chr5 8178177 8178233 -191451917 - L1MC3 LINE L1 -524 7261 7210 225 65 0 0 chr5 8178233 8178264 -191451886 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 2642 172 186 122 chr5 8178264 8178552 -191451598 - L1MC3 LINE L1 -575 7210 6714 24 32 0 0 chr5 8178604 8178635 -191451515 + AT_rich Low_complexity Low_complexity 1 31 0 1927 132 3 3 chr5 8178673 8178976 -191451174 - AluSx SINE Alu -9 303 1 323 295 76 78 chr5 8178997 8179389 -191450761 - L1MEc LINE L1 -2690 3525 3028 29 28 0 0 chr5 8179506 8179542 -191450608 + AT_rich Low_complexity Low_complexity 1 36 0 301 345 31 31 chr5 8179704 8180009 -191450141 - L1MEc LINE L1 -3643 2572 2285 2048 88 7 14 chr5 8180050 8180346 -191449804 + AluSq SINE Alu 1 294 -19 219 186 0 0 chr5 8180390 8180433 -191449717 + CT-rich Low_complexity Low_complexity 3 45 0 510 241 73 55 chr5 8180473 8180693 -191449457 + LTR67 LTR ERVL 68 291 -266 1059 263 89 9 chr5 8181255 8181593 -191448557 + MLT1A1 LTR MaLR 1 365 0 1334 189 164 44 chr5 8182065 8182498 -191447652 - MLT1D LTR MaLR -20 485 1 1237 102 10 56 chr5 8182573 8182770 -191447380 - THE1B LTR MaLR 0 364 177 2088 112 137 3 chr5 8182772 8183094 -191447056 - MLT2A2 LTR ERVL -88 365 1 1779 214 59 0 chr5 8183357 8183763 -191446387 - L1MD3 LINE L1 -19 7976 7547 21 0 0 0 chr5 8184363 8184384 -191445766 + AT_rich Low_complexity Low_complexity 1 21 0 182 315 45 36 chr5 8184577 8184688 -191445462 + L2 LINE L2 1437 1548 -1766 515 260 0 7 chr5 8186260 8186563 -191443587 + (CA)n Simple_repeat Simple_repeat 1 300 0 1108 246 83 77 chr5 8186878 8187374 -191442776 + MLT1F1 LTR MaLR 68 566 -1 1286 147 7 8 chr5 8187685 8187906 -191442244 - MLT2B3 LTR ERVL -195 219 1 1580 233 37 22 chr5 8187910 8188369 -191441781 - MLT1C LTR MaLR -1 466 1 433 296 103 29 chr5 8190471 8190714 -191439436 + L1MC4a LINE L1 5135 5395 -751 572 246 315 11 chr5 8190714 8191092 -191439058 + L2 LINE L2 2417 2909 -405 227 182 23 0 chr5 8191095 8191139 -191439011 + MLT1G LTR MaLR 1 45 -550 2007 183 39 9 chr5 8191140 8191517 -191438633 + MLT2D LTR ERVL 1 480 -40 243 0 0 0 chr5 8191531 8191558 -191438592 + (TG)n Simple_repeat Simple_repeat 2 28 0 1306 204 31 40 chr5 8191698 8192048 -191438102 + MLT1G LTR MaLR 161 571 0 757 272 71 58 chr5 8192096 8192475 -191437675 + L2 LINE L2 2926 3309 -4 1104 287 30 38 chr5 8192502 8193028 -191437122 + L1MC4a LINE L1 5407 5928 -1880 1283 229 93 41 chr5 8194329 8194769 -191435381 + MLT1C LTR MaLR 1 463 -4 231 214 89 0 chr5 8194802 8194858 -191435292 + L2 LINE L2 3210 3270 -2 415 304 91 32 chr5 8196539 8196759 -191433391 + MIR SINE MIR 16 248 -14 21 36 0 0 chr5 8196970 8196998 -191433152 + AT_rich Low_complexity Low_complexity 1 28 0 1825 105 66 21 chr5 8197876 8198162 -191431988 - AluSq SINE Alu -13 300 2 1615 173 24 64 chr5 8198383 8198758 -191431392 + MLT1A1 LTR MaLR 1 360 -5 2350 61 3 3 chr5 8198941 8199237 -191430913 + AluY SINE Alu 1 296 -15 1178 232 95 34 chr5 8199545 8199797 -191430353 - MLT1C LTR MaLR 0 467 183 2108 109 0 0 chr5 8199797 8200090 -191430060 - AluSc SINE Alu -16 293 1 1178 232 95 34 chr5 8200090 8200217 -191429933 - MLT1C LTR MaLR -284 183 65 2328 102 50 44 chr5 8200355 8200566 -191429584 - THE1B LTR MaLR 0 364 148 1913 114 4 4 chr5 8200566 8200876 -191429274 + AluSc SINE Alu 1 310 0 2328 102 50 44 chr5 8200876 8201025 -191429125 - THE1B LTR MaLR -216 148 1 309 217 98 22 chr5 8201758 8201850 -191428300 - MLT1D LTR MaLR -356 149 51 308 285 156 38 chr5 8203060 8203246 -191426904 + MIR SINE MIR 31 238 -24 232 299 244 17 chr5 8203245 8203593 -191426557 + L2 LINE L2 2887 3313 0 * 629 201 98 24 chr5 8205339 8205503 -191424647 - MER45A DNA AcHobo 0 178 3 5419 106 24 20 chr5 8205795 8205828 -191424322 + L1PA16 LINE L1 5332 5363 -803 1175 59 0 182 chr5 8205828 8206064 -191424086 + 7SK RNA RNA 1 193 0 5419 106 24 20 chr5 8206064 8206861 -191423289 + L1PA16 LINE L1 5363 6165 -1 2137 100 0 10 chr5 8207552 8207861 -191422289 + AluSg SINE Alu 2 307 -3 297 215 88 73 chr5 8207862 8208067 -191422083 + L1MC/D LINE L1 3115 3322 -2824 2592 242 46 31 chr5 8208071 8209029 -191421121 + L1MC/D LINE L1 3575 4546 -1600 836 97 0 0 chr5 8209034 8209147 -191421003 - AluSq SINE Alu -48 265 153 599 256 6 0 chr5 8209154 8209310 -191420840 + L1MC/D LINE L1 4563 4719 -1427 360 0 0 0 chr5 8209377 8209417 -191420733 + (TG)n Simple_repeat Simple_repeat 1 40 0 821 166 7 0 chr5 8209420 8209559 -191420591 - FLAM_C SINE Alu -3 140 1 363 277 103 79 chr5 8209587 8209879 -191420271 - L1MEc LINE L1 -4091 2305 2007 25 0 0 0 chr5 8210340 8210365 -191419785 + AT_rich Low_complexity Low_complexity 1 25 0 1681 127 67 0 chr5 8210465 8210732 -191419418 - AluSq SINE Alu -28 285 1 232 215 83 42 chr5 8211075 8211219 -191418931 + L1MC/D LINE L1 5189 5338 -808 374 341 150 30 chr5 8211221 8211488 -191418662 + L1MC/D LINE L1 5525 5823 -1985 853 85 0 0 chr5 8211514 8211632 -191418518 - AluY SINE Alu -21 290 173 387 0 0 0 chr5 8211688 8211731 -191418419 + (CA)n Simple_repeat Simple_repeat 2 44 0 2536 186 35 2 chr5 8211750 8212239 -191417911 - MLT1D LTR MaLR 0 505 1 180 0 0 0 chr5 8212314 8212334 -191417816 + (TC)n Simple_repeat Simple_repeat 1 20 0 21 104 0 0 chr5 8212348 8212425 -191417725 + AT_rich Low_complexity Low_complexity 1 77 0 456 294 0 27 chr5 8212540 8212724 -191417426 + (TG)n Simple_repeat Simple_repeat 2 180 0 241 156 0 0 chr5 8214966 8215011 -191415139 + L2 LINE L2 3018 3062 -210 1668 71 0 0 chr5 8215549 8215760 -191414390 - AluSg/x SINE Alu -25 285 75 1965 131 103 25 chr5 8215887 8216254 -191413896 + MLT2C1 LTR ERVL 2 397 0 710 98 46 12 chr5 8218318 8218491 -191411659 + (CA)n Simple_repeat Simple_repeat 2 180 0 256 191 35 9 chr5 8218515 8218630 -191411520 + (CA)n Simple_repeat Simple_repeat 2 119 0 1487 190 65 50 chr5 8218636 8219020 -191411130 + MLT1B LTR MaLR 1 390 0 1913 289 52 72 chr5 8219029 8220004 -191410146 - ERVL LTR ERVL -2955 2809 1854 398 292 39 8 chr5 8220034 8220164 -191409986 + L2 LINE L2 3138 3271 -1 1280 215 134 6 chr5 8220788 8221123 -191409027 - L1MD3 LINE L1 -13 7982 7605 1386 222 57 40 chr5 8221493 8221863 -191408287 - MLT2B3 LTR ERVL -4 550 175 313 259 65 0 chr5 8221869 8221977 -191408173 - MLT1J2 LTR MaLR -313 137 23 180 240 87 87 chr5 8222854 8222958 -191407192 + L2 LINE L2 2729 2832 -482 614 241 143 52 chr5 8223276 8223636 -191406514 - MLT1J2 LTR MaLR -1 445 41 1180 275 142 53 chr5 8223724 8224345 -191405805 - MER50 LTR ERV1 -58 676 1 257 262 71 24 chr5 8225357 8225441 -191404709 + MER91B DNA MER1_type 44 131 -59 292 321 12 0 chr5 8225454 8225538 -191404612 + MER91B DNA MER1_type 93 177 -13 4237 129 41 124 chr5 8225944 8226988 -191403162 - L1MC2 LINE L1 -11 6333 5377 2067 108 3 0 chr5 8227735 8228042 -191402108 + AluSx SINE Alu 1 312 0 208 358 42 0 chr5 8228186 8228281 -191401869 + L3 LINE CR1 1459 1557 -20 1870 136 3 3 chr5 8228472 8228766 -191401384 - L1PB1 LINE L1 -1 6150 5857 3957 118 21 4 chr5 8228766 8229491 -191400659 + L1PB1 LINE L1 5117 5853 -298 320 309 73 0 chr5 8229655 8229765 -191400385 + L2 LINE L2 3155 3272 0 224 319 43 76 chr5 8232601 8232786 -191397364 + L3 LINE CR1 597 775 -802 30 45 0 0 chr5 8233632 8233676 -191396474 + AT_rich Low_complexity Low_complexity 1 44 0 2311 61 7 3 chr5 8233864 8234158 -191395992 + AluY SINE Alu 1 295 -16 826 235 90 45 chr5 8234932 8235315 -191394835 - MLT1C LTR MaLR -1 466 12 1755 167 0 3 chr5 8235607 8235900 -191394250 + AluJb SINE Alu 1 292 -20 263 250 114 0 chr5 8236348 8236426 -191393724 + MIR3 SINE MIR 110 200 -8 2245 104 0 0 chr5 8236426 8236735 -191393415 - AluSx SINE Alu -3 309 1 239 282 220 22 chr5 8238186 8238459 -191391691 - L2 LINE L2 -342 2972 2646 2222 110 0 0 chr5 8238480 8238790 -191391360 + AluSx SINE Alu 1 310 -2 852 152 0 0 chr5 8238926 8239058 -191391092 - AluSq/x SINE Alu -181 132 1 1695 147 109 32 chr5 8239225 8239573 -191390577 + THE1C LTR MaLR 1 375 0 300 354 31 36 chr5 8240679 8240871 -191389279 - HAL1b LINE L1 -1052 296 106 2478 44 0 0 chr5 8240904 8241199 -191388951 + AluY SINE Alu 1 295 -16 1733 129 42 18 chr5 8241201 8241487 -191388663 - AluJo SINE Alu -19 293 1 431 133 0 0 chr5 8241579 8241639 -191388511 + 5S rRNA rRNA 31 90 -31 2044 135 0 0 chr5 8241971 8242274 -191387876 - AluSx SINE Alu -9 303 1 403 314 128 33 chr5 8243259 8243680 -191386470 - L1MEd LINE L1 -5198 921 461 240 345 73 0 chr5 8243683 8243848 -191386302 - L1MEd LINE L1 -5939 180 4 1696 151 4 0 chr5 8245583 8245848 -191384302 + AluSx SINE Alu 1 266 -46 246 32 0 0 chr5 8245862 8245893 -191384257 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1981 120 7 14 chr5 8245967 8246259 -191383891 + AluSx SINE Alu 2 291 -21 1854 135 10 13 chr5 8247427 8247731 -191382419 - AluJb SINE Alu -9 303 1 1403 187 73 0 chr5 8248652 8248804 -191381346 - AluJo SINE Alu -19 293 154 207 0 0 0 chr5 8248804 8248827 -191381323 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1403 187 73 0 chr5 8248827 8248947 -191381203 - AluJo SINE Alu -158 154 1 407 232 21 0 chr5 8249258 8249353 -191380797 - MIR SINE MIR -98 164 68 849 40 0 151 chr5 8249447 8249745 -191380405 + L1PA3 LINE L1 5891 6143 -12 1199 40 14 0 chr5 8249858 8250006 -191380144 + L1PA2 LINE L1 6006 6155 0 251 216 0 0 chr5 8250164 8250215 -191379935 + L1M4 LINE L1 3294 3344 -2802 1417 133 12 40 chr5 8250221 8250469 -191379681 - AluJo SINE Alu -14 298 58 529 245 7 19 chr5 8250475 8250630 -191379520 + L1M4 LINE L1 3337 3489 -2657 20552 123 35 27 chr5 8250758 8254232 -191375918 + L1P LINE L1 12 3513 -2633 4503 74 0 0 chr5 8254232 8254798 -191375352 + L1PA7 LINE L1 5586 6152 -2 572 255 11 75 chr5 8254859 8254989 -191375161 + L1ME1 LINE L1 5986 6102 -64 2319 70 3 0 chr5 8254989 8255287 -191374863 - AluSp SINE Alu -14 299 1 572 255 11 75 chr5 8255287 8255344 -191374806 + L1ME1 LINE L1 6102 6161 -5 5081 203 83 11 chr5 8256674 8257055 -191373095 + Cheshire DNA MER1_type 532 884 -1536 1618 171 51 3 chr5 8257055 8257347 -191372803 + AluJb SINE Alu 1 306 -6 5081 203 83 11 chr5 8257347 8258696 -191371454 + Cheshire DNA MER1_type 884 2415 -5 669 134 79 31 chr5 8259990 8260117 -191370033 + FLAM_C SINE Alu 1 133 0 213 290 197 2 chr5 8260412 8260534 -191369616 - MIR SINE MIR -62 146 9 320 250 138 20 chr5 8260652 8260848 -191369302 + L1ME4a LINE L1 5881 6099 -22 973 219 90 68 chr5 8262008 8262328 -191367822 + MER93b LTR ERV1 1 331 -42 1612 124 98 0 chr5 8262328 8262593 -191367557 - AluSq SINE Alu -22 291 1 973 219 90 68 chr5 8262593 8262637 -191367513 + MER93b LTR ERV1 331 373 0 216 198 77 121 chr5 8263833 8263924 -191366226 + L2 LINE L2 3186 3272 0 294 344 118 24 chr5 8265015 8265227 -191364923 - MIR SINE MIR -16 246 15 244 204 0 0 chr5 8265658 8265702 -191364448 - MIR SINE MIR -147 115 72 208 85 0 85 chr5 8266267 8266314 -191363836 + (TTTTTA)n Simple_repeat Simple_repeat 6 48 0 1087 111 0 0 chr5 8266322 8266475 -191363675 - AluSg/x SINE Alu -26 286 134 2115 68 4 4 chr5 8269535 8269840 -191360310 - AluY SINE Alu 0 305 1 1391 129 0 0 chr5 8270137 8270346 -191359804 + AluSg/x SINE Alu 91 299 -13 1541 173 80 26 chr5 8270636 8270988 -191359162 - THE1C LTR MaLR 0 375 5 1858 147 0 7 chr5 8271599 8271892 -191358258 - AluJb SINE Alu -21 291 1 1678 167 17 0 chr5 8272300 8272587 -191357563 - AluSq SINE Alu -21 292 1 309 130 0 0 chr5 8272897 8272943 -191357207 - FLAM SINE Alu -7 126 81 1516 152 110 15 chr5 8274008 8274272 -191355878 + AluSx SINE Alu 5 293 -19 31 0 0 0 chr5 8274304 8274335 -191355815 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr5 8274515 8274544 -191355606 + AT_rich Low_complexity Low_complexity 1 29 0 300 316 137 16 chr5 8276375 8276565 -191353585 + L3 LINE CR1 626 838 -739 201 74 0 0 chr5 8277590 8277617 -191352533 + (T)n Simple_repeat Simple_repeat 1 27 0 542 255 30 81 chr5 8277725 8277781 -191352369 - MIR SINE MIR 0 262 205 2466 88 3 0 chr5 8277781 8278089 -191352061 - AluSp SINE Alu -4 309 1 542 255 30 81 chr5 8278089 8278267 -191351883 - MIR SINE MIR -57 205 40 2567 57 0 0 chr5 8278889 8279188 -191350962 - AluY SINE Alu -12 299 1 258 32 0 0 chr5 8279282 8279313 -191350837 + (TTA)n Simple_repeat Simple_repeat 1 31 0 23 33 0 0 chr5 8283593 8283623 -191346527 + AT_rich Low_complexity Low_complexity 1 30 0 3331 203 20 16 chr5 8283982 8284716 -191345434 - L1MB3 LINE L1 -10 6173 5437 2450 81 10 0 chr5 8286598 8286906 -191343244 - AluSx SINE Alu -1 311 1 899 248 22 47 chr5 8288554 8288876 -191341274 - L1MB7 LINE L1 -10 6174 5861 22 0 0 0 chr5 8289255 8289277 -191340873 + AT_rich Low_complexity Low_complexity 1 22 0 2197 99 27 10 chr5 8290020 8290314 -191339836 - AluSx SINE Alu -13 299 1 1750 160 0 45 chr5 8290343 8290655 -191339495 + AluJb SINE Alu 1 298 -14 180 346 39 0 chr5 8292591 8292669 -191337481 + MIR SINE MIR 59 139 -123 2559 43 0 7 chr5 8294136 8294437 -191335713 + AluY SINE Alu 1 299 -12 1869 132 11 0 chr5 8294755 8295020 -191335130 + AluSg SINE Alu 28 295 -15 2545 69 3 0 chr5 8297007 8297311 -191332839 - AluY SINE Alu -6 305 1 203 342 37 19 chr5 8298711 8298872 -191331278 - MIR SINE MIR -41 221 58 23 0 0 0 chr5 8301161 8301184 -191328966 + AT_rich Low_complexity Low_complexity 1 23 0 1922 269 124 21 chr5 8301724 8302680 -191327470 - L1MC4 LINE L1 -52 7990 6936 559 282 108 35 chr5 8302770 8303142 -191327008 + HAL1 LINE L1 578 976 -1531 1573 202 136 0 chr5 8303920 8304287 -191325863 - MER47B DNA MER2_type 0 418 2 306 217 79 21 chr5 8304595 8304746 -191325404 + MLT1F LTR MaLR 24 189 -378 2337 204 78 2 chr5 8304762 8305276 -191324874 - MER68 LTR ERV1 0 562 10 429 226 0 39 chr5 8305318 8305420 -191324730 + MLT1F LTR MaLR 314 411 -182 2375 128 0 0 chr5 8305470 8305805 -191324345 - THE1B LTR MaLR 0 364 30 4746 131 69 55 chr5 8305824 8306710 -191323440 - MER49 LTR ERV1 -25 898 1 618 194 45 8 chr5 8306710 8306843 -191323307 + MLT1F LTR MaLR 405 542 0 524 230 11 79 chr5 8306843 8306982 -191323168 + MIR SINE MIR 69 195 -67 4283 71 54 2 chr5 8306982 8307560 -191322590 + LTR14B LTR ERVK 1 608 0 524 230 11 79 chr5 8307560 8307598 -191322552 + MIR SINE MIR 195 234 -28 710 223 127 75 chr5 8308473 8308819 -191321331 - LTR16A LTR ERVL -2 448 85 2514 55 0 23 chr5 8309009 8309319 -191320831 + AluY SINE Alu 1 303 -8 476 316 97 72 chr5 8310407 8310456 -191319694 - L1M4 LINE L1 -2970 3176 3130 2511 64 3 0 chr5 8310456 8310754 -191319396 + AluY SINE Alu 1 299 -12 476 316 97 72 chr5 8310754 8311612 -191318538 - L1M4 LINE L1 -3016 3130 2239 1372 197 100 4 chr5 8311612 8311881 -191318269 - AluJo SINE Alu -17 295 1 476 316 97 72 chr5 8311881 8311964 -191318186 - L1M4 LINE L1 -3907 2239 2160 737 267 45 25 chr5 8313248 8313696 -191316454 + MER76 LTR ERV 1 521 -167 835 233 59 81 chr5 8314099 8314490 -191315660 + MLT1G3 LTR MaLR 172 549 0 4750 184 26 42 chr5 8315899 8316024 -191314126 + L1MB1 LINE L1 4130 4255 -1913 180 0 0 0 chr5 8316024 8316044 -191314106 + (CA)n Simple_repeat Simple_repeat 1 20 0 4750 184 26 42 chr5 8316044 8316233 -191313917 + L1MB1 LINE L1 4255 4446 -1722 2520 69 0 0 chr5 8316233 8316536 -191313614 + AluY SINE Alu 1 303 -8 4750 184 26 42 chr5 8316536 8317133 -191313017 + L1MB1 LINE L1 4446 5051 -1117 1100 95 0 0 chr5 8317133 8317270 -191312880 + AluSc SINE Alu 128 264 -45 4750 184 26 42 chr5 8317270 8318188 -191311962 + L1MB1 LINE L1 5051 5965 -203 2425 126 81 0 chr5 8318188 8318584 -191311566 + MSTC LTR MaLR 1 428 0 4750 184 26 42 chr5 8318584 8318780 -191311370 + L1MB1 LINE L1 5965 6163 -5 1484 259 72 16 chr5 8318778 8319415 -191310735 - L1ME3A LINE L1 -231 5939 5267 * 981 257 55 23 chr5 8319645 8320042 -191310108 - L1ME LINE L1 -499 5671 5262 865 302 107 36 chr5 8320128 8320868 -191309282 - L1ME LINE L1 -1053 5093 4407 2281 96 10 0 chr5 8320868 8321160 -191308990 - AluY SINE Alu -16 295 1 865 302 107 36 chr5 8321160 8321763 -191308387 - L1ME LINE L1 -1739 4407 3613 455 225 47 30 chr5 8321920 8322089 -191308061 + MER5B DNA MER1_type 1 172 -6 1335 107 202 0 chr5 8322500 8322805 -191307345 + L1MA7 LINE L1 5936 6291 0 224 254 45 0 chr5 8323206 8323273 -191306877 + MIR SINE MIR 89 158 -104 1733 182 26 47 chr5 8323497 8323849 -191306301 + L1MB3 LINE L1 5788 6133 -50 2133 109 0 45 chr5 8323849 8324160 -191305990 + AluSx SINE Alu 3 299 -13 1733 182 26 47 chr5 8324160 8324192 -191305958 + L1MB3 LINE L1 6133 6164 -19 198 0 0 0 chr5 8324192 8324214 -191305936 + (TG)n Simple_repeat Simple_repeat 2 23 0 * 288 0 0 0 chr5 8324213 8324245 -191305905 + (TA)n Simple_repeat Simple_repeat 1 32 0 672 254 122 61 chr5 8324273 8324778 -191305372 - MLT1E2 LTR MaLR -52 574 1 403 229 221 0 chr5 8325230 8325370 -191304780 + MER5B DNA MER1_type 7 177 -1 232 279 35 35 chr5 8325580 8325666 -191304484 - L2 LINE L2 -51 3221 3136 243 0 0 0 chr5 8325882 8325909 -191304241 + (TG)n Simple_repeat Simple_repeat 1 27 0 369 252 0 27 chr5 8325928 8326039 -191304111 + L1MC5 LINE L1 7806 7913 -48 2935 78 5 5 chr5 8326098 8326496 -191303654 + MLT2A1 LTR ERVL 3 400 -44 181 160 20 20 chr5 8326569 8326619 -191303531 + (TA)n Simple_repeat Simple_repeat 2 51 0 377 68 14 7 chr5 8326637 8326709 -191303441 + MLT2A2 LTR ERVL 400 453 0 21 57 0 0 chr5 8326715 8326750 -191303400 + AT_rich Low_complexity Low_complexity 1 35 0 429 110 37 0 chr5 8327444 8327526 -191302624 + GA-rich Low_complexity Low_complexity 4 88 0 349 266 65 16 chr5 8327668 8327792 -191302358 - L1 LINE L1 -2945 3201 3072 242 194 28 28 chr5 8327852 8327924 -191302226 + (CCCCG)n Simple_repeat Simple_repeat 5 76 0 21 36 0 0 chr5 8327934 8327962 -191302188 + GC_rich Low_complexity Low_complexity 1 28 0 180 158 0 0 chr5 8327970 8328008 -191302142 + (TCG)n Simple_repeat Simple_repeat 2 39 0 31 0 0 0 chr5 8328071 8328102 -191302048 + GC_rich Low_complexity Low_complexity 1 31 0 31 0 0 0 chr5 8328155 8328186 -191301964 + GC_rich Low_complexity Low_complexity 1 31 0 29 28 0 0 chr5 8328297 8328333 -191301817 + GC_rich Low_complexity Low_complexity 1 36 0 27 29 0 0 chr5 8328380 8328414 -191301736 + GC_rich Low_complexity Low_complexity 1 34 0 23 33 0 0 chr5 8328807 8328837 -191301313 + AT_rich Low_complexity Low_complexity 1 30 0 1327 226 68 43 chr5 8333461 8333984 -191296166 - MLT1E3 LTR MaLR 0 624 18 859 97 0 0 chr5 8334237 8334397 -191295753 + AluSc SINE Alu 168 327 0 198 0 0 0 chr5 8336222 8336244 -191293906 + (T)n Simple_repeat Simple_repeat 1 22 0 909 159 53 0 chr5 8336520 8336690 -191293460 + MER3 DNA MER1_type 1 179 -30 266 326 47 29 chr5 8337064 8337236 -191292914 - MIR SINE MIR -17 245 71 180 286 57 14 chr5 8337756 8337826 -191292324 - MIR SINE MIR -118 144 72 349 296 11 0 chr5 8338570 8338658 -191291492 - MIR SINE MIR -161 101 13 2371 104 0 0 chr5 8338716 8339023 -191291127 + AluY SINE Alu 1 307 -4 268 330 11 11 chr5 8339795 8339889 -191290261 - MIR SINE MIR -4 258 165 207 308 49 56 chr5 8341227 8341370 -191288780 + L2 LINE L2 2921 3062 -251 286 259 12 35 chr5 8341964 8342049 -191288101 - MER117 DNA MER1_type -60 137 55 260 109 18 18 chr5 8342501 8342556 -191287594 - L1ME4a LINE L1 -10 6111 6057 259 288 27 45 chr5 8342873 8342984 -191287166 + MIR SINE MIR 82 190 -72 180 0 0 0 chr5 8344431 8344451 -191285699 + (A)n Simple_repeat Simple_repeat 1 20 0 848 186 12 12 chr5 8345219 8345380 -191284770 - FRAM SINE Alu -5 161 1 196 314 14 43 chr5 8347734 8347804 -191282346 - L2 LINE L2 -10 3303 3236 2243 115 0 16 chr5 8349424 8349737 -191280413 - AluSc SINE Alu -1 308 1 470 281 22 14 chr5 8354502 8354641 -191275509 - MIR SINE MIR -35 227 88 207 250 42 94 chr5 8357156 8357252 -191272898 + MER5A DNA MER1_type 92 182 -7 427 246 108 0 chr5 8359073 8359240 -191270910 + MER3 DNA MER1_type 3 187 -22 207 292 31 62 chr5 8360889 8360985 -191269165 - L2 LINE L2 -1 3271 3179 1506 168 70 16 chr5 8363573 8363942 -191266208 - Charlie5 DNA MER1_type 0 2624 2236 26 50 0 0 chr5 8364540 8364580 -191265570 + AT_rich Low_complexity Low_complexity 1 40 0 2138 145 0 3 chr5 8367932 8368235 -191261915 - AluSx SINE Alu -10 302 1 24 0 0 0 chr5 8370426 8370450 -191259700 + AT_rich Low_complexity Low_complexity 1 24 0 1296 138 0 0 chr5 8371009 8371190 -191258960 + AluSg/x SINE Alu 120 300 -12 2095 113 3 0 chr5 8371470 8371772 -191258378 - AluSx SINE Alu 0 303 1 239 306 74 19 chr5 8373585 8373693 -191256457 - MIR3 SINE MIR -14 194 81 363 221 102 31 chr5 8374459 8374586 -191255564 + MIR SINE MIR 27 162 -46 233 245 0 0 chr5 8374933 8374982 -191255168 + MLT1L LTR MaLR 4 52 -563 525 133 37 3 chr5 8374985 8375121 -191255029 + MER53 DNA DNA 1 184 -5 420 306 137 32 chr5 8375247 8375495 -191254655 + MLT1J LTR MaLR 238 511 0 543 259 57 31 chr5 8376235 8376428 -191253722 - MER5C DNA MER1_type -3 321 124 224 293 60 26 chr5 8376750 8376866 -191253284 - MER5B DNA MER1_type -58 120 1 21 0 0 0 chr5 8377021 8377042 -191253108 + AT_rich Low_complexity Low_complexity 1 21 0 499 312 97 33 chr5 8378783 8378821 -191251329 - L1MC4a LINE L1 -1842 5966 5932 2050 141 10 0 chr5 8378821 8379112 -191251038 - AluSx SINE Alu -18 294 1 499 312 97 33 chr5 8379112 8379435 -191250715 - L1MC4a LINE L1 -1876 5932 5582 469 314 74 95 chr5 8379507 8381382 -191248768 + L1M4 LINE L1 2363 3782 -2364 255 252 16 32 chr5 8381561 8381684 -191248466 + L1M4 LINE L1 3928 4048 -2098 861 136 17 0 chr5 8381723 8381841 -191248309 - AluSq/x SINE Alu -193 120 1 287 265 92 41 chr5 8382029 8382225 -191247925 + L1M4 LINE L1 5176 5381 -765 287 176 305 53 chr5 8382854 8382985 -191247165 + L2 LINE L2 3147 3310 -3 1217 215 168 22 chr5 8384515 8384919 -191245231 - MLT1C LTR MaLR 0 467 5 207 224 41 0 chr5 8385555 8385604 -191244546 + CT-rich Low_complexity Low_complexity 3 53 0 22 35 0 0 chr5 8386698 8386727 -191243423 + GC_rich Low_complexity Low_complexity 1 29 0 222 281 116 33 chr5 8388106 8388227 -191241923 + MIR3 SINE MIR 74 204 -4 1648 191 158 47 chr5 8388236 8388421 -191241729 + LTR44 LTR ERV1 1 164 -355 715 224 18 12 chr5 8388421 8388586 -191241564 - FRAM SINE Alu 0 166 1 1648 191 158 47 chr5 8388586 8388867 -191241283 + LTR44 LTR ERV1 164 519 0 325 316 123 7 chr5 8389153 8389308 -191240842 + L1MC4a LINE L1 5265 5437 -727 711 303 100 20 chr5 8389333 8389683 -191240467 + L1MC4a LINE L1 5517 5894 -1914 2046 141 33 33 chr5 8390282 8390644 -191239506 + THE1B LTR MaLR 3 364 0 1066 188 0 11 chr5 8392418 8392604 -191237546 - AluJb SINE Alu -10 302 119 1726 191 13 34 chr5 8392608 8392978 -191237172 + MLT2C1 LTR ERVL 9 534 -20 190 0 67 0 chr5 8393097 8393127 -191237023 + (TTTTC)n Simple_repeat Simple_repeat 3 34 0 2583 65 10 0 chr5 8393866 8394174 -191235976 - AluY SINE Alu 0 311 1 2406 97 0 3 chr5 8394176 8394476 -191235674 - AluSg SINE Alu -11 299 1 569 249 74 47 chr5 8394677 8394934 -191235216 - LTR37B LTR ERV1 -64 404 141 510 225 48 37 chr5 8395646 8395833 -191234317 + MER53 DNA DNA 1 189 0 389 232 18 9 chr5 8396061 8396173 -191233977 - MER89 LTR ERV1 0 559 447 660 192 41 7 chr5 8396547 8396693 -191233457 + MER20 DNA MER1_type 3 153 -66 567 236 76 55 chr5 8397141 8397416 -191232734 - MLT2F LTR ERVL -149 514 234 260 299 39 24 chr5 8397450 8397577 -191232573 - MLT2F LTR ERVL -533 130 2 451 111 0 67 chr5 8397836 8397926 -191232224 + FLAM_C SINE Alu 60 143 0 401 210 5 38 chr5 8398013 8398199 -191231951 + CT-rich Low_complexity Low_complexity 1 180 0 1768 166 45 55 chr5 8403117 8403539 -191226611 + Tigger2a DNA MER2_type 6 423 -11 322 323 93 0 chr5 8403704 8403865 -191226285 + MIR3 SINE MIR 20 195 -13 * 345 327 35 0 chr5 8403863 8403976 -191226174 + L2 LINE L2 3196 3312 -1 1132 80 6 6 chr5 8404010 8404185 -191225965 + (TGGA)n Simple_repeat Simple_repeat 3 177 0 286 364 52 19 chr5 8455897 8456166 -191173984 - L2 LINE L2 -2493 821 544 432 189 56 0 chr5 8457208 8457298 -191172852 + L1MA8 LINE L1 6191 6285 -6 21 0 0 0 chr5 8457299 8457320 -191172830 + AT_rich Low_complexity Low_complexity 1 21 0 333 0 0 0 chr5 8457723 8457760 -191172390 + (TC)n Simple_repeat Simple_repeat 2 38 0 324 0 0 0 chr5 8457762 8457798 -191172352 + (TG)n Simple_repeat Simple_repeat 1 36 0 2172 109 3 3 chr5 8458945 8459239 -191170911 - AluSx SINE Alu -18 294 1 304 213 213 0 chr5 8460676 8460784 -191169366 - L2 LINE L2 -220 3052 2922 291 28 0 0 chr5 8461070 8461106 -191169044 + (CA)n Simple_repeat Simple_repeat 2 37 0 1509 209 65 18 chr5 8461121 8461481 -191168669 - MLT2D LTR ERVL -40 424 1 223 245 21 0 chr5 8461952 8462046 -191168104 + (TG)n Simple_repeat Simple_repeat 1 96 0 429 241 18 0 chr5 8462068 8462238 -191167912 + (TG)n Simple_repeat Simple_repeat 1 173 0 238 300 29 0 chr5 8462238 8462308 -191167842 + (CGTG)n Simple_repeat Simple_repeat 1 72 0 587 214 17 6 chr5 8462310 8462488 -191167662 + (TG)n Simple_repeat Simple_repeat 1 180 0 328 216 21 0 chr5 8462514 8462611 -191167539 + (TG)n Simple_repeat Simple_repeat 1 99 0 377 304 53 12 chr5 8463609 8463780 -191166370 + MIR SINE MIR 64 241 -21 1244 226 66 31 chr5 8464052 8464370 -191165780 + MER58B DNA MER1_type 1 329 -12 1263 227 93 41 chr5 8465183 8465623 -191164527 + MLT1C LTR MaLR 1 463 -4 204 214 89 0 chr5 8465656 8465712 -191164438 + L2 LINE L2 3210 3270 -2 338 325 89 10 chr5 8467402 8467605 -191162545 + MIR SINE MIR 16 234 -28 21 36 0 0 chr5 8467832 8467860 -191162290 + AT_rich Low_complexity Low_complexity 1 28 0 391 220 80 0 chr5 8468714 8468814 -191161336 + LTR16C LTR ERVL 380 487 -4 21 36 0 0 chr5 8469151 8469179 -191160971 + AT_rich Low_complexity Low_complexity 1 28 0 240 242 88 22 chr5 8469327 8469418 -191160732 - L1M4c LINE L1 -4667 1717 1621 212 208 0 21 chr5 8471563 8471611 -191158539 + GA-rich Low_complexity Low_complexity 4 50 0 480 316 113 0 chr5 8472466 8472643 -191157507 - MIR SINE MIR -44 218 22 2058 227 69 30 chr5 8474482 8475178 -191154972 + L1ME1 LINE L1 4372 5094 -1052 1894 202 18 27 chr5 8475186 8475763 -191154387 + L1P LINE L1 2856 3620 -2526 3364 79 9 5 chr5 8475763 8476205 -191153945 - MLT2A1 LTR ERVL 0 444 1 1894 202 18 27 chr5 8476205 8476281 -191153869 + L1P LINE L1 3620 3695 -2451 224 30 30 0 chr5 8476263 8476296 -191153854 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 * 1951 104 66 21 chr5 8477093 8477380 -191152770 - AluSq SINE Alu -12 301 2 1610 173 24 64 chr5 8477601 8477976 -191152174 + MLT1A1 LTR MaLR 1 360 -5 2454 68 3 3 chr5 8478159 8478455 -191151695 + AluY SINE Alu 1 296 -15 1163 232 95 34 chr5 8478763 8479015 -191151135 - MLT1C LTR MaLR 0 467 183 2243 106 0 0 chr5 8479015 8479308 -191150842 - AluSc SINE Alu -16 293 1 1163 232 95 34 chr5 8479308 8479435 -191150715 - MLT1C LTR MaLR -284 183 65 1400 123 14 19 chr5 8479573 8479784 -191150366 - THE1B LTR MaLR 0 364 155 1144 140 6 0 chr5 8479784 8479955 -191150195 + AluSc SINE Alu 1 172 -137 234 170 21 0 chr5 8480057 8480104 -191150046 + MER5A DNA MER1_type 81 128 -61 726 274 17 6 chr5 8482748 8482927 -191147223 + MLT1H1 LTR MaLR 1 181 -374 474 283 107 22 chr5 8482995 8483252 -191146898 + MLT1G1 LTR MaLR 190 491 -76 5599 129 32 13 chr5 8484528 8484587 -191145563 + L1PA13 LINE L1 3616 3672 -2491 333 0 0 0 chr5 8484587 8484624 -191145526 + (CA)n Simple_repeat Simple_repeat 2 38 0 5599 129 32 13 chr5 8484624 8487020 -191143130 + L1PA13 LINE L1 3672 6157 -6 720 232 38 64 chr5 8487036 8488017 -191142133 + L1ME1 LINE L1 5083 6043 -123 261 0 0 0 chr5 8488216 8488245 -191141905 + (A)n Simple_repeat Simple_repeat 1 29 0 2429 106 25 11 chr5 8488263 8488622 -191141528 + THE1B LTR MaLR 1 364 0 3671 127 28 55 chr5 8489293 8489971 -191140179 + L1MC1 LINE L1 5674 6333 0 335 194 125 56 chr5 8490772 8490916 -191139234 + L1ME2 LINE L1 5700 5856 -308 906 251 24 0 chr5 8491012 8491223 -191138927 - MIR SINE MIR 0 262 47 845 143 0 19 chr5 8492177 8492331 -191137819 - L1MA5 LINE L1 -6 6294 6144 3761 98 11 4 chr5 8492340 8492881 -191137269 + L1P LINE L1 4186 4730 -1416 206 206 0 0 chr5 8493152 8493186 -191136964 + polypurine Low_complexity Low_complexity 3 36 0 464 265 0 7 chr5 8495054 8495355 -191134795 + (CA)n Simple_repeat Simple_repeat 1 298 0 1072 244 83 77 chr5 8495670 8496166 -191133984 + MLT1F1 LTR MaLR 68 566 -1 1275 141 7 8 chr5 8496478 8496699 -191133451 - MLT2B3 LTR ERVL -195 219 1 1590 231 37 22 chr5 8496703 8497162 -191132988 - MLT1C LTR MaLR -1 466 1 228 275 65 36 chr5 8499373 8499511 -191130639 + L1MC4a LINE L1 5254 5395 -2413 500 251 212 8 chr5 8499627 8499886 -191130264 + L2 LINE L2 2598 2909 -405 226 182 23 0 chr5 8499889 8499933 -191130217 + MLT1G LTR MaLR 1 45 -550 1963 183 42 7 chr5 8499934 8500308 -191129842 + MLT2D LTR ERVL 1 479 -41 225 0 0 0 chr5 8500321 8500346 -191129804 + (TG)n Simple_repeat Simple_repeat 2 26 0 1287 204 31 40 chr5 8500486 8500836 -191129314 + MLT1G LTR MaLR 161 571 0 615 280 69 55 chr5 8500884 8501263 -191128887 + L2 LINE L2 2926 3309 -4 1126 287 30 38 chr5 8501290 8501816 -191128334 + L1MC4a LINE L1 5407 5928 -1880 726 150 92 0 chr5 8502840 8503023 -191127127 + AluSg/x SINE Alu 117 313 0 1130 74 101 0 chr5 8503023 8503172 -191126978 - THE1B LTR MaLR -200 164 1 322 206 98 22 chr5 8503905 8503997 -191126153 - MLT1D LTR MaLR -356 149 51 230 285 156 38 chr5 8505207 8505393 -191124757 + MIR SINE MIR 31 238 -24 628 201 98 24 chr5 8507485 8507649 -191122501 - MER45A DNA AcHobo 0 178 3 5427 106 24 20 chr5 8507941 8507974 -191122176 + L1PA16 LINE L1 5332 5363 -803 1156 59 0 182 chr5 8507974 8508210 -191121940 + 7SK RNA RNA 1 193 0 5427 106 24 20 chr5 8508210 8509007 -191121143 + L1PA16 LINE L1 5363 6165 -1 1864 36 54 0 chr5 8509697 8509921 -191120229 + AluY SINE Alu 2 237 -74 247 49 49 0 chr5 8510195 8510236 -191119914 + (TTTTA)n Simple_repeat Simple_repeat 3 45 0 1308 48 0 12 chr5 8510237 8510405 -191119745 - L1PA5 LINE L1 -1 6153 5988 1018 273 217 16 chr5 8513456 8513832 -191116318 + LTR50 LTR ERVL 79 378 -417 2332 51 17 0 chr5 8513832 8514126 -191116024 - L1PA7 LINE L1 -2 6152 5854 1018 273 217 16 chr5 8514126 8514321 -191115829 + LTR50 LTR ERVL 378 765 -30 233 232 146 0 chr5 8514505 8514587 -191115563 - MLT1K LTR MaLR 0 588 495 866 318 75 32 chr5 8514767 8515236 -191114914 - MLT1K LTR MaLR -99 489 1 1214 265 40 11 chr5 8515350 8515697 -191114453 + LTR16B LTR ERVL 108 464 0 13805 148 11 112 chr5 8517430 8520647 -191109503 + L1P LINE L1 12 2904 -3242 2087 259 131 35 chr5 8520752 8521723 -191108427 - HAL1 LINE L1 -307 2200 1137 479 214 5 2 chr5 8522321 8522754 -191107396 + (CA)n Simple_repeat Simple_repeat 1 434 0 196 286 60 24 chr5 8523056 8523140 -191107010 - MIR SINE MIR -31 231 145 16668 112 10 4 chr5 8523362 8526659 -191103491 + L1PA8 LINE L1 2855 6171 -1 30 0 0 0 chr5 8526659 8526689 -191103461 + AT_rich Low_complexity Low_complexity 1 30 0 1391 163 67 15 chr5 8526692 8526850 -191103300 + L1MA10 LINE L1 5986 6134 -200 402 108 0 0 chr5 8526850 8526915 -191103235 + (CCAA)n Simple_repeat Simple_repeat 3 67 0 1391 163 67 15 chr5 8526915 8527087 -191103063 + L1MA10 LINE L1 6134 6333 -1 318 275 92 98 chr5 8528128 8528455 -191101695 - L2 LINE L2 -1366 1948 1624 1601 190 10 13 chr5 8528607 8528907 -191101243 + AluJo SINE Alu 1 299 -13 488 295 80 68 chr5 8530338 8530751 -191099399 - L2 LINE L2 -1268 2046 1629 7586 55 124 8 chr5 8531802 8532848 -191097302 + L1P LINE L1 4 1171 -4975 * 24525 28 0 3 chr5 8532837 8535739 -191094411 + L1P LINE L1 1794 4686 -1460 21 0 0 0 chr5 8538209 8538230 -191091920 + AT_rich Low_complexity Low_complexity 1 21 0 361 278 72 49 chr5 8538842 8539105 -191091045 + L1M4 LINE L1 4562 4830 -1316 326 275 66 44 chr5 8539391 8539573 -191090577 + L1M4 LINE L1 5144 5329 -817 198 174 0 0 chr5 8539696 8539742 -191090408 + (TG)n Simple_repeat Simple_repeat 1 46 0 2200 182 33 12 chr5 8539957 8540381 -191089769 - L1MC1 LINE L1 -2 6331 5899 231 198 238 8 chr5 8541326 8541452 -191088698 - LTR33A LTR ERVL -51 472 318 389 264 31 78 chr5 8544168 8544361 -191085789 - MLT1J2 LTR MaLR 0 450 267 231 105 35 53 chr5 8545026 8545083 -191085067 + T-rich Low_complexity Low_complexity 3 58 0 1248 264 105 28 chr5 8545662 8546158 -191083992 + MER90 LTR ERV1 81 614 0 4922 54 7 3 chr5 8546450 8547027 -191083123 + L1PA5 LINE L1 5571 6149 -5 28 0 0 0 chr5 8547027 8547055 -191083095 + AT_rich Low_complexity Low_complexity 1 28 0 822 243 51 31 chr5 8547739 8548094 -191082056 + L1ME1 LINE L1 2108 2449 -3766 2433 221 56 26 chr5 8548173 8548212 -191081938 + L1ME1 LINE L1 5517 5553 -682 2025 128 0 41 chr5 8548212 8548531 -191081619 + AluSx SINE Alu 1 306 -6 2433 221 56 26 chr5 8548531 8549184 -191080966 + L1ME1 LINE L1 5553 6230 -5 434 319 24 0 chr5 8549831 8550000 -191080150 + MER63A DNA MER1_type 1 173 -37 207 197 13 26 chr5 8550268 8550344 -191079806 + (CATATA)n Simple_repeat Simple_repeat 3 77 0 222 323 38 70 chr5 8551212 8551398 -191078752 + MIR SINE MIR 46 225 -37 366 270 50 0 chr5 8551982 8552082 -191078068 + MIR3 SINE MIR 100 204 -4 22 0 0 0 chr5 8552319 8552341 -191077809 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 8553095 8553117 -191077033 + AT_rich Low_complexity Low_complexity 1 22 0 210 118 0 0 chr5 8553750 8553784 -191076366 + (A)n Simple_repeat Simple_repeat 1 34 0 454 286 112 69 chr5 8553892 8554519 -191075631 + L1M4c LINE L1 1137 2018 -883 1073 153 36 31 chr5 8554744 8554940 -191075210 - MER3 DNA MER1_type 0 209 13 292 241 71 16 chr5 8555085 8555246 -191074904 + L1M4c LINE L1 2480 2698 -3959 424 167 0 0 chr5 8555263 8555335 -191074815 - MER116 DNA Mariner -3 77 6 416 302 72 29 chr5 8555368 8555745 -191074405 + L1M4c LINE L1 2705 3097 -3443 320 299 91 16 chr5 8556801 8556988 -191073162 - L3 LINE CR1 -311 1266 1066 388 253 163 30 chr5 8558484 8558650 -191071500 - MIR SINE MIR -58 204 17 280 366 49 42 chr5 8559186 8559328 -191070822 - L2 LINE L2 -3 3269 3127 501 122 20 10 chr5 8559422 8559520 -191070630 + CT-rich Low_complexity Low_complexity 3 101 0 1579 196 32 0 chr5 8559583 8559863 -191070287 - AluJb SINE Alu -23 289 1 198 0 0 0 chr5 8559905 8559927 -191070223 + (CA)n Simple_repeat Simple_repeat 2 23 0 198 0 0 0 chr5 8559927 8559949 -191070201 + (TG)n Simple_repeat Simple_repeat 2 23 0 1884 176 9 21 chr5 8559954 8560294 -191069856 - MLT2C1 LTR ERVL -61 336 1 231 311 95 0 chr5 8560368 8560442 -191069708 - MER5B DNA MER1_type -6 172 92 1054 270 77 70 chr5 8560490 8561023 -191069127 + Charlie7 DNA MER1_type 2 543 -2069 1465 148 13 4 chr5 8561023 8561252 -191068898 + L1PA13 LINE L1 5914 6144 -19 1054 270 77 70 chr5 8561252 8561432 -191068718 + Charlie7 DNA MER1_type 543 720 -1892 211 109 55 55 chr5 8561496 8561551 -191068599 + (CAATA)n Simple_repeat Simple_repeat 3 57 0 1120 240 59 57 chr5 8561682 8562070 -191068080 - MLT1B LTR MaLR 0 390 2 2419 65 0 0 chr5 8562096 8562390 -191067760 - AluY SINE Alu -17 294 1 526 301 51 20 chr5 8562633 8562829 -191067321 - L2 LINE L2 0 3313 3112 971 334 85 27 chr5 8562956 8563594 -191066556 - L2 LINE L2 -1262 2052 1378 278 167 0 0 chr5 8566290 8566332 -191063818 + 5S rRNA rRNA 1 42 -79 278 167 0 0 chr5 8566435 8566477 -191063673 + 5S rRNA rRNA 1 42 -79 265 167 0 0 chr5 8566525 8566567 -191063583 + 5S rRNA rRNA 1 42 -79 662 169 12 0 chr5 8568271 8568431 -191061719 + (TGGA)n Simple_repeat Simple_repeat 1 162 0 322 204 13 112 chr5 8568949 8569101 -191061049 + HAL1 LINE L1 100 236 -2271 729 269 88 70 chr5 8569198 8569329 -191060821 + HAL1 LINE L1 418 545 -1962 713 259 40 0 chr5 8569329 8569530 -191060620 + MER3 DNA MER1_type 1 209 0 729 269 88 70 chr5 8569530 8569886 -191060264 + HAL1 LINE L1 545 923 -1584 228 35 0 0 chr5 8569886 8569915 -191060235 + (CAA)n Simple_repeat Simple_repeat 2 30 0 729 269 88 70 chr5 8569915 8570121 -191060029 + HAL1 LINE L1 923 1124 -1383 313 319 0 0 chr5 8571029 8571120 -191059030 + MIR SINE MIR 41 131 -77 22 0 0 0 chr5 8571455 8571477 -191058673 + AT_rich Low_complexity Low_complexity 1 22 0 2862 120 31 5 chr5 8571761 8572178 -191057972 - MSTA LTR MaLR 0 428 1 3089 154 27 8 chr5 8572178 8572698 -191057452 - MSTA-int LTR MaLR 0 1651 1122 1913 126 3 85 chr5 8572696 8573061 -191057089 + MSTA-int LTR MaLR 1317 1651 0 * 2707 140 19 19 chr5 8573061 8573489 -191056661 + MSTA LTR MaLR 1 428 0 333 330 30 0 chr5 8573872 8573972 -191056178 - MER5A DNA MER1_type -77 112 10 197 277 21 0 chr5 8574048 8574095 -191056055 + L2 LINE L2 3225 3272 0 322 301 90 9 chr5 8574669 8574785 -191055365 + MIR SINE MIR 43 168 -62 241 300 54 56 chr5 8575048 8575192 -191054958 + MIR SINE MIR 15 156 -64 590 181 123 32 chr5 8575920 8576075 -191054075 + ERVL LTR ERVL 3443 3611 -2153 8315 16 3 0 chr5 8576732 8578178 -191051972 - L1PA2 LINE L1 0 6155 4711 209 108 27 0 chr5 8578324 8578361 -191051789 + (TTGG)n Simple_repeat Simple_repeat 2 39 0 569 274 21 11 chr5 8580104 8580290 -191049860 + MIR SINE MIR 65 252 -10 223 255 0 0 chr5 8580886 8580937 -191049213 + A-rich Low_complexity Low_complexity 2 52 0 1771 177 76 0 chr5 8581468 8581784 -191048366 + MSTB LTR MaLR 87 426 0 436 57 101 6 chr5 8581980 8582138 -191048012 + (TA)n Simple_repeat Simple_repeat 2 174 0 529 248 15 7 chr5 8583695 8583832 -191046318 - LTR41 LTR ERVL -618 155 18 365 262 200 19 chr5 8583873 8584217 -191045933 - L2 LINE L2 -71 3242 2820 499 354 0 0 chr5 8584225 8584400 -191045750 + (TG)n Simple_repeat Simple_repeat 1 175 0 852 257 76 16 chr5 8584617 8584920 -191045230 - L2 LINE L2 -512 2802 2482 293 127 18 0 chr5 8587146 8587201 -191042949 - MSTB1 LTR MaLR 0 432 377 393 154 0 0 chr5 8587201 8587292 -191042858 + (TA)n Simple_repeat Simple_repeat 1 91 0 1831 182 73 0 chr5 8587292 8587633 -191042517 - MSTB1 LTR MaLR -65 367 2 814 103 0 0 chr5 8587795 8587902 -191042248 + AluSg/x SINE Alu 188 294 -15 625 240 62 5 chr5 8588461 8588653 -191041497 - L1MD3 LINE L1 0 7995 7793 228 149 0 43 chr5 8588679 8588726 -191041424 + MLT1L LTR MaLR 567 611 -4 396 178 122 11 chr5 8589894 8589984 -191040166 - MLT1J LTR MaLR 0 511 412 592 258 28 28 chr5 8590176 8590354 -191039796 - MLT1J LTR MaLR -330 181 4 1121 247 160 15 chr5 8590434 8590835 -191039315 - LTR40b LTR ERVL 0 462 4 599 71 12 0 chr5 8592323 8592408 -191037742 - AluY SINE Alu -13 298 213 6833 71 6 3 chr5 8592514 8593700 -191036450 + L1PA8 LINE L1 4972 6166 -6 1859 185 26 4 chr5 8593707 8594077 -191036073 - L1MA5 LINE L1 -153 6147 5777 248 268 0 0 chr5 8594030 8594086 -191036064 + L1M2 LINE L1 5668 5723 -577 * 274 294 56 37 chr5 8594297 8594494 -191035656 - L1ME LINE L1 -480 5690 5487 388 318 71 18 chr5 8595753 8595923 -191034227 - HAL1 LINE L1 -938 1569 1391 5888 168 15 26 chr5 8596048 8598202 -191031948 - L1PB1 LINE L1 -3 6148 4028 21 36 0 0 chr5 8598538 8598566 -191031584 + AT_rich Low_complexity Low_complexity 1 28 0 252 0 0 0 chr5 8600732 8600760 -191029390 + (TTTTA)n Simple_repeat Simple_repeat 1 28 0 337 311 34 38 chr5 8601975 8602184 -191027966 + MIR SINE MIR 23 230 -32 260 281 31 70 chr5 8602451 8602579 -191027571 + MER94 DNA DNA 9 131 -3 1672 226 20 6 chr5 8605044 8605394 -191024756 - MER4D LTR ERV1 0 903 549 727 152 23 0 chr5 8605424 8605556 -191024594 - MER49 LTR ERV1 -638 285 151 * 1235 176 23 38 chr5 8605555 8605792 -191024358 - MER49 LTR ERV1 -666 257 23 2029 154 0 0 chr5 8605792 8606097 -191024053 - AluSx SINE Alu -7 305 1 1235 176 23 38 chr5 8606097 8606120 -191024030 - MER49 LTR ERV1 -900 23 1 235 231 0 0 chr5 8606379 8606431 -191023719 + A-rich Low_complexity Low_complexity 4 55 0 2065 144 0 3 chr5 8607932 8608231 -191021919 - AluSx SINE Alu -14 298 1 281 307 33 20 chr5 8608341 8608494 -191021656 + MIR SINE MIR 60 214 -48 1933 142 45 10 chr5 8610108 8610397 -191019753 + AluSx SINE Alu 1 299 -13 523 317 61 15 chr5 8611334 8611596 -191018554 + MLT2E LTR ERVL 31 304 -324 195 42 0 0 chr5 8612040 8612064 -191018086 + (TG)n Simple_repeat Simple_repeat 1 24 0 23 54 0 0 chr5 8613249 8613286 -191016864 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr5 8613312 8613333 -191016817 + AT_rich Low_complexity Low_complexity 1 21 0 254 208 51 45 chr5 8613343 8613521 -191016629 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 24 0 0 0 chr5 8613521 8613545 -191016605 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr5 8613709 8613738 -191016412 + AT_rich Low_complexity Low_complexity 1 29 0 651 198 0 0 chr5 8614477 8614603 -191015547 + L1MB4 LINE L1 6038 6163 -17 316 320 8 16 chr5 8615502 8615630 -191014520 - MIR SINE MIR -20 242 116 25 0 0 0 chr5 8615881 8615906 -191014244 + AT_rich Low_complexity Low_complexity 1 25 0 6074 100 18 19 chr5 8615947 8616149 -191014001 - L1PA14 LINE L1 -11 6150 5949 1786 161 14 3 chr5 8616149 8616440 -191013710 - AluSx SINE Alu -18 294 1 6074 100 18 19 chr5 8616440 8617789 -191012361 - L1PA14 LINE L1 -212 5949 4603 1492 163 30 22 chr5 8617789 8618059 -191012091 - THE1C LTR MaLR -103 272 1 28 48 0 0 chr5 8618059 8618101 -191012049 + AT_rich Low_complexity Low_complexity 1 42 0 1682 160 65 0 chr5 8619438 8619713 -191010437 + AluSx SINE Alu 1 293 -19 768 210 28 23 chr5 8620401 8620577 -191009573 + MER45A DNA AcHobo 2 178 0 259 208 44 30 chr5 8621893 8622011 -191008139 + MLT1G1 LTR MaLR 319 409 0 1588 192 35 24 chr5 8623301 8623640 -191006510 - MER61A LTR ERV1 0 343 1 250 314 38 0 chr5 8624462 8624567 -191005583 + L1ME LINE L1 5576 5684 -437 1655 148 3 48 chr5 8624822 8625112 -191005038 - AluSx SINE Alu -5 307 31 405 140 18 9 chr5 8625150 8625264 -191004886 + (TA)n Simple_repeat Simple_repeat 2 116 0 844 177 89 58 chr5 8625314 8625574 -191004576 + MLT1E2 LTR MaLR 71 332 -322 1430 139 57 16 chr5 8625574 8625818 -191004332 + MER74A LTR ERVL 1 254 -304 699 201 67 18 chr5 8625818 8625982 -191004168 - LOR1b LTR ERV1 0 461 290 511 202 219 43 chr5 8626117 8626350 -191003800 - LOR1b LTR ERV1 -109 352 79 1106 206 66 8 chr5 8626377 8626634 -191003516 + MER74A LTR ERVL 250 521 -37 1337 251 29 0 chr5 8626715 8627022 -191003128 + MLT1E2 LTR MaLR 311 626 0 303 93 0 0 chr5 8627027 8627070 -191003080 + (ATG)n Simple_repeat Simple_repeat 2 44 0 2461 116 29 0 chr5 8628955 8629299 -191000851 + L1PB3 LINE L1 5800 6153 -1 757 276 61 0 chr5 8629513 8629827 -191000323 + L2 LINE L2 2779 3114 -199 248 258 159 71 chr5 8629997 8630179 -190999971 + L2 LINE L2 3102 3299 -14 201 282 60 60 chr5 8630196 8630313 -190999837 - L2 LINE L2 -247 3025 2909 1183 226 66 84 chr5 8630471 8630965 -190999185 + MLT1J LTR MaLR 1 485 -26 765 188 60 0 chr5 8630965 8631114 -190999036 - MER90 LTR ERV1 0 575 418 301 349 122 4 chr5 8632059 8632314 -190997836 - L2 LINE L2 -160 3112 2828 934 177 24 17 chr5 8632513 8632710 -190997440 + MSTA LTR MaLR 139 428 0 21 0 0 0 chr5 8633422 8633443 -190996707 + AT_rich Low_complexity Low_complexity 1 21 0 1809 214 59 0 chr5 8634043 8634449 -190995701 + L1MD3 LINE L1 7547 7976 -19 2066 112 137 3 chr5 8634712 8635034 -190995116 + MLT2A2 LTR ERVL 1 365 -88 1228 102 10 56 chr5 8635036 8635233 -190994917 + THE1B LTR MaLR 177 364 0 1323 206 155 35 chr5 8635308 8635741 -190994409 + MLT1D LTR MaLR 1 485 -20 1072 263 89 9 chr5 8636213 8636551 -190993599 - MLT1A1 LTR MaLR 0 365 1 478 236 73 55 chr5 8637113 8637333 -190992817 - LTR67 LTR ERVL -266 291 68 257 209 0 0 chr5 8637373 8637416 -190992734 + polypurine Low_complexity Low_complexity 3 45 0 2166 94 0 13 chr5 8637460 8637758 -190992392 - AluSq SINE Alu -19 294 1 29 28 0 0 chr5 8638266 8638302 -190991848 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr5 8638529 8638551 -190991599 + AT_rich Low_complexity Low_complexity 1 22 0 2013 133 3 3 chr5 8638832 8639133 -190991017 + AluSx SINE Alu 1 301 -11 24 32 0 0 chr5 8639171 8639202 -190990948 + AT_rich Low_complexity Low_complexity 1 31 0 3049 181 160 96 chr5 8639254 8639542 -190990608 + L1MC3 LINE L1 6714 6982 -803 225 65 0 0 chr5 8639542 8639573 -190990577 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 3049 181 160 96 chr5 8639573 8639629 -190990521 + L1MC3 LINE L1 6982 7033 -752 282 286 0 0 chr5 8639629 8639706 -190990444 + MLT1F1 LTR MaLR 35 111 -456 3049 181 160 96 chr5 8639706 8640274 -190989876 + L1MC3 LINE L1 7033 7766 -19 381 185 60 7 chr5 8640290 8640441 -190989709 + (TA)n Simple_repeat Simple_repeat 1 159 0 203 188 45 8 chr5 8640452 8640585 -190989565 + (TA)n Simple_repeat Simple_repeat 2 139 0 375 315 126 49 chr5 8640755 8641406 -190988744 + L1M4 LINE L1 3716 4416 -1730 1652 144 26 58 chr5 8641692 8642073 -190988077 - L1PA13 LINE L1 -1 6162 5794 21 57 0 0 chr5 8642536 8642571 -190987579 + AT_rich Low_complexity Low_complexity 1 35 0 18916 100 11 31 chr5 8642589 8645344 -190984806 + Charlie3 DNA MER1_type 1 2700 -10 269 267 6 0 chr5 8645419 8645595 -190984555 + (CA)n Simple_repeat Simple_repeat 1 177 0 439 311 0 16 chr5 8645633 8645816 -190984334 + (CA)n Simple_repeat Simple_repeat 1 180 0 312 281 0 0 chr5 8645852 8646030 -190984120 + (CA)n Simple_repeat Simple_repeat 2 179 0 2113 128 67 21 chr5 8746507 8746882 -190883268 - LTR7 LTR ERV1 -58 392 1 2094 82 7 23 chr5 8746882 8747186 -190882964 - HERVH LTR ERV1 0 7713 7415 2811 98 2 62 chr5 8747186 8747636 -190882514 - HERVH LTR ERV1 -134 7579 7157 347 235 49 0 chr5 8747606 8747687 -190882463 - HERVH LTR ERV1 -1670 6043 5959 * 4757 27 0 0 chr5 8747692 8748255 -190881895 - L1PA4 LINE L1 -750 5396 4834 6665 30 3 3 chr5 8748255 8749023 -190881127 + L1PA4 LINE L1 5377 6154 -1 1555 78 46 1 chr5 8749024 8749369 -190880781 + L1P3 LINE L1 5107 5465 -707 34338 116 10 27 chr5 8749469 8755196 -190874954 - HERVH LTR ERV1 -1766 5947 1 2248 137 108 7 chr5 8755196 8755605 -190874545 - LTR7 LTR ERV1 0 450 1 2100 138 3 0 chr5 8756256 8756554 -190873596 - AluSx SINE Alu -13 299 1 1759 62 0 0 chr5 8756678 8756887 -190873263 - AluY SINE Alu -14 297 89 302 229 0 0 chr5 8758563 8758624 -190871526 - MLT1I LTR MaLR -1 408 348 223 354 24 24 chr5 8759549 8759676 -190870474 + MER5A DNA MER1_type 38 164 -25 309 344 16 21 chr5 8759747 8759939 -190870211 + L2 LINE L2 2458 2648 -666 417 302 34 6 chr5 8760094 8760273 -190869877 + MER20 DNA MER1_type 36 219 0 236 310 23 0 chr5 8760437 8760524 -190869626 + MLT1I LTR MaLR 317 405 -4 2478 78 5 111 chr5 8760550 8760972 -190869178 - MER51B LTR ERV1 0 377 1 1528 181 44 17 chr5 8763313 8763677 -190866473 - AluSq SINE Alu 0 372 1 206 322 91 13 chr5 8764724 8764850 -190865300 - MIR SINE MIR -75 133 2 383 210 23 0 chr5 8765608 8765784 -190864366 + (CA)n Simple_repeat Simple_repeat 1 180 0 1840 116 81 18 chr5 8765842 8766157 -190863993 + AluSg SINE Alu 1 310 0 22 35 0 0 chr5 8766753 8766782 -190863368 + AT_rich Low_complexity Low_complexity 1 29 0 318 26 0 0 chr5 8767165 8767204 -190862946 + (CA)n Simple_repeat Simple_repeat 1 39 0 402 244 111 7 chr5 8767572 8767707 -190862443 + L2 LINE L2 3122 3270 -2 251 211 39 23 chr5 8768455 8768583 -190861567 + (TTATA)n Simple_repeat Simple_repeat 4 133 0 * 367 195 35 41 chr5 8768505 8768674 -190861476 + (TA)n Simple_repeat Simple_repeat 1 168 0 22 80 0 0 chr5 8768720 8768770 -190861380 + AT_rich Low_complexity Low_complexity 1 50 0 333 0 0 0 chr5 8771918 8771955 -190858195 + (TG)n Simple_repeat Simple_repeat 2 38 0 21 57 0 0 chr5 8772406 8772441 -190857709 + AT_rich Low_complexity Low_complexity 1 35 0 216 0 0 0 chr5 8772818 8772842 -190857308 + (TTTTTG)n Simple_repeat Simple_repeat 2 25 0 578 191 36 0 chr5 8773967 8774077 -190856073 - L1MB5 LINE L1 -37 6137 6024 383 83 33 0 chr5 8774064 8774124 -190856026 + L1MD3 LINE L1 7921 7982 -13 * 406 298 107 28 chr5 8775114 8775433 -190854717 - L2 LINE L2 -49 3264 2921 6241 31 19 3 chr5 8775807 8776549 -190853601 - L1PA4 LINE L1 0 6155 5402 4710 46 0 1 chr5 8776545 8777144 -190853006 + L1P LINE L1 4830 5424 -741 * 228 139 0 0 chr5 8777951 8777987 -190852163 + MER51A LTR ERV1 1 36 -598 * 967 184 162 5 chr5 8777976 8778236 -190851914 + MER51A LTR ERV1 334 629 -11 194 287 250 0 chr5 8778276 8778384 -190851766 - L2 LINE L2 0 3272 3138 305 171 29 0 chr5 8779123 8779193 -190850957 - L1PA16 LINE L1 0 6166 6095 5265 168 95 23 chr5 8779193 8780136 -190850014 + LTR28 LTR ERV1 1 1011 -9 998 163 0 77 chr5 8780147 8780283 -190849867 - L1PA16 LINE L1 -71 6095 5979 2375 100 0 0 chr5 8780283 8780582 -190849568 - AluSq SINE Alu -14 299 1 998 163 0 77 chr5 8780582 8780654 -190849496 - L1PA16 LINE L1 -187 5979 5903 225 65 0 0 chr5 8781814 8781845 -190848305 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 188 273 18 0 chr5 8781870 8781925 -190848225 - L2 LINE L2 -31 3282 3227 349 307 116 32 chr5 8781996 8782185 -190847965 - L2 LINE L2 -209 3104 2900 1359 134 0 15 chr5 8782370 8782572 -190847578 - AluSq SINE Alu -12 301 103 40 0 0 0 chr5 8782615 8782655 -190847495 + AT_rich Low_complexity Low_complexity 1 40 0 952 207 49 0 chr5 8782662 8782865 -190847285 - MER58A DNA MER1_type 0 224 12 24 0 0 0 chr5 8783075 8783099 -190847051 + AT_rich Low_complexity Low_complexity 1 24 0 292 362 48 29 chr5 8783304 8783514 -190846636 - L2 LINE L2 -526 2788 2575 214 179 0 0 chr5 8783558 8783597 -190846553 - L2 LINE L2 -866 2448 2410 318 234 65 32 chr5 8783846 8783970 -190846180 - MLT1J LTR MaLR -327 184 57 246 292 14 0 chr5 8784013 8784085 -190846065 - L2 LINE L2 -997 2317 2245 318 257 14 42 chr5 8784826 8784970 -190845180 - LTR52 LTR ERVL -271 150 11 563 321 16 25 chr5 8785106 8785323 -190844827 + MIR SINE MIR 16 231 -31 29 0 0 0 chr5 8787130 8787159 -190842991 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr5 8787355 8787383 -190842767 + AT_rich Low_complexity Low_complexity 1 28 0 403 188 72 58 chr5 8788196 8788334 -190841816 + L1MD2 LINE L1 6013 6152 -207 358 269 6 12 chr5 8788336 8788681 -190841469 + (CA)n Simple_repeat Simple_repeat 1 343 0 382 280 119 88 chr5 8792932 8793386 -190836764 + HAL1b LINE L1 220 687 -661 22 0 0 0 chr5 8793457 8793479 -190836671 + AT_rich Low_complexity Low_complexity 1 22 0 287 331 142 0 chr5 8794313 8794440 -190835710 - L2 LINE L2 0 3272 3128 596 289 5 32 chr5 8794507 8794694 -190835456 + MIR SINE MIR 71 252 -10 622 208 69 25 chr5 8794710 8794869 -190835281 + FRAM SINE Alu 1 166 0 210 339 169 0 chr5 8795582 8795706 -190834444 - L2 LINE L2 0 3272 3128 643 275 5 37 chr5 8795772 8795961 -190834189 + MIR SINE MIR 71 253 -9 706 216 49 25 chr5 8795975 8796137 -190834013 + FRAM SINE Alu 1 166 0 194 227 0 107 chr5 8796278 8796353 -190833797 - L2 LINE L2 0 3313 3247 729 175 15 0 chr5 8796575 8796712 -190833438 - MLT1F LTR MaLR 0 542 404 21 82 0 0 chr5 8797667 8797716 -190832434 + AT_rich Low_complexity Low_complexity 1 49 0 22 0 0 0 chr5 8797793 8797815 -190832335 + AT_rich Low_complexity Low_complexity 1 22 0 23 33 0 0 chr5 8798007 8798037 -190832113 + AT_rich Low_complexity Low_complexity 1 30 0 3453 127 7 39 chr5 8798427 8798970 -190831180 - MER1A DNA MER1_type 0 527 2 1833 54 50 8 chr5 8799534 8799795 -190830355 - L1P3 LINE L1 -400 5754 5483 * 2358 83 0 0 chr5 8799789 8800127 -190830023 + L1P LINE L1 4773 5110 -1036 3271 31 2 5 chr5 8800129 8800550 -190829600 - L1PA4 LINE L1 -453 5702 5283 3469 32 11 5 chr5 8800550 8800981 -190829169 + L1PA4 LINE L1 5719 6154 -1 902 77 97 5 chr5 8800982 8801178 -190828972 + L1P LINE L1 5107 5320 -826 2742 27 25 0 chr5 8801280 8801648 -190828502 - L1P2 LINE L1 -495 5659 5283 3544 34 5 5 chr5 8801648 8802082 -190828068 + L1PA4 LINE L1 5719 6154 -1 1837 72 13 4 chr5 8802082 8802458 -190827692 + L1P3 LINE L1 5105 5483 -689 22 0 0 0 chr5 8803198 8803220 -190826930 + AT_rich Low_complexity Low_complexity 1 22 0 199 325 94 26 chr5 8804315 8804432 -190825718 - MIR SINE MIR -6 256 132 1474 114 42 4 chr5 8804442 8804706 -190825444 + L1MC1 LINE L1 5649 5922 -411 1374 199 55 19 chr5 8804718 8805015 -190825135 + MLT1A1 LTR MaLR 31 341 -24 2200 172 39 9 chr5 8805015 8805446 -190824704 + L1MC1 LINE L1 5881 6324 -9 1374 199 55 19 chr5 8805446 8805460 -190824690 + MLT1A1 LTR MaLR 341 353 -12 2692 13 0 10 chr5 8806331 8806635 -190823515 - AluYa5 SINE Alu -10 301 1 342 321 132 6 chr5 8807033 8807192 -190822958 + L2 LINE L2 3125 3303 -10 234 0 0 0 chr5 8807279 8807305 -190822845 + (CA)n Simple_repeat Simple_repeat 2 27 0 761 64 27 0 chr5 8807434 8807544 -190822606 + (TATTG)n Simple_repeat Simple_repeat 1 113 0 2306 157 14 5 chr5 8807546 8807960 -190822190 - L1MB1 LINE L1 -11 6157 5740 782 188 19 19 chr5 8808255 8808415 -190821735 - L1PB4 LINE L1 -1 6155 5996 321 217 0 0 chr5 8808441 8808510 -190821640 - L1PB4 LINE L1 -90 6066 5998 316 212 0 0 chr5 8808541 8808607 -190821543 - L1PB4 LINE L1 -93 6063 5998 539 228 127 6 chr5 8808635 8808793 -190821357 - L1PB4 LINE L1 -90 6066 5890 291 191 0 0 chr5 8808968 8809031 -190821119 + (TG)n Simple_repeat Simple_repeat 2 64 0 4436 123 3 1 chr5 8810882 8811538 -190818612 - L1PA15 LINE L1 -13 6152 5496 277 297 40 0 chr5 8811577 8811678 -190818472 - L1M4 LINE L1 -1534 4612 4508 796 282 173 19 chr5 8811697 8812020 -190818130 + L2 LINE L2 2158 2530 -784 1180 152 5 10 chr5 8812030 8812234 -190817916 + MLT1A1 LTR MaLR 1 203 -162 185 0 40 0 chr5 8812240 8812265 -190817885 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 618 167 0 0 chr5 8813093 8813213 -190816937 - L1MA7 LINE L1 0 6291 6172 619 230 158 10 chr5 8813358 8813567 -190816583 + MLT1H LTR MaLR 79 318 -231 545 176 104 40 chr5 8813609 8813734 -190816416 + MLT1H LTR MaLR 402 534 -15 406 326 0 20 chr5 8813800 8813996 -190816154 - L1ME LINE L1 -418 5703 5512 615 273 76 52 chr5 8814719 8815339 -190814811 + L1M4 LINE L1 3784 4433 -1713 1078 194 64 67 chr5 8815339 8815684 -190814466 - MER2 DNA MER2_type 0 344 1 615 273 76 52 chr5 8815684 8815940 -190814210 + L1M4 LINE L1 4433 4681 -1465 1059 196 63 72 chr5 8816282 8816629 -190813521 - MER2 DNA MER2_type 0 344 1 325 273 56 39 chr5 8816629 8816915 -190813235 + L1ME3A LINE L1 4411 4701 -1445 286 256 12 12 chr5 8816941 8817023 -190813127 + L1ME3A LINE L1 5831 5912 -258 1148 215 64 82 chr5 8817274 8817740 -190812410 - MLT1C LTR MaLR -7 460 3 233 263 92 26 chr5 8817774 8817850 -190812300 + MIR SINE MIR 64 144 -118 5238 129 29 4 chr5 8817953 8819213 -190810937 - L1PA16 LINE L1 -4 6162 4877 746 175 138 3 chr5 8819550 8819731 -190810419 - MLT1J LTR MaLR -46 459 228 21 0 0 0 chr5 8820567 8820588 -190809562 + AT_rich Low_complexity Low_complexity 1 21 0 40122 39 24 2 chr5 8820611 8826630 -190803520 - L1PA3 LINE L1 0 6155 2 192 158 0 0 chr5 8827918 8827956 -190802194 + A-rich Low_complexity Low_complexity 1 38 0 21 36 0 0 chr5 8828097 8828125 -190802025 + AT_rich Low_complexity Low_complexity 1 28 0 479 323 108 53 chr5 8828648 8829063 -190801087 - L1MC4a LINE L1 -1980 5828 5391 267 206 0 14 chr5 8829082 8829155 -190800995 - L1MC4a LINE L1 -821 5345 5274 2192 121 3 0 chr5 8829427 8829734 -190800416 - AluSq SINE Alu -5 308 1 1082 221 103 29 chr5 8830047 8830395 -190799755 + MLT1A2 LTR MaLR 1 467 0 240 326 20 31 chr5 8830424 8830522 -190799628 + L3b LINE CR1 1328 1424 -159 1770 181 79 65 chr5 8832489 8832914 -190797236 - MER67D LTR ERV1 0 514 79 2242 119 48 20 chr5 8832914 8833268 -190796882 - THE1B LTR MaLR 0 364 1 1770 181 79 65 chr5 8833268 8833349 -190796801 - MER67D LTR ERV1 -435 79 1 833 241 20 24 chr5 8834369 8834622 -190795528 - MLT1J LTR MaLR -259 252 1 342 206 0 72 chr5 8834698 8834795 -190795355 + L1MC4 LINE L1 6614 6703 -1339 229 85 0 43 chr5 8834800 8834847 -190795303 + (TA)n Simple_repeat Simple_repeat 2 46 0 243 0 0 0 chr5 8834847 8834874 -190795276 + (CA)n Simple_repeat Simple_repeat 2 28 0 485 205 26 96 chr5 8834997 8835153 -190794997 - MIR SINE MIR -2 260 116 391 164 273 0 chr5 8836368 8836478 -190793672 - MER67D LTR ERV1 -5 509 370 243 0 0 0 chr5 8836480 8836507 -190793643 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2177 19 8 0 chr5 8836537 8836796 -190793354 - L1PA2 LINE L1 0 6155 5895 287 28 0 0 chr5 8836796 8836832 -190793318 + L1PA7 LINE L1 5738 5773 -382 1511 97 4 26 chr5 8836962 8837190 -190792960 + L1PA7 LINE L1 5930 6152 -2 458 222 0 8 chr5 8837218 8837335 -190792815 + (TATATG)n Simple_repeat Simple_repeat 3 118 0 1143 78 6 20 chr5 8838820 8838869 -190791281 + L1PA4 LINE L1 5702 5750 -405 2178 27 0 0 chr5 8838869 8839126 -190791024 - L1PA4 LINE L1 -4 6151 5895 1143 78 6 20 chr5 8839126 8839270 -190790880 + L1PA4 LINE L1 5750 5882 -273 1397 276 50 32 chr5 8839514 8840209 -190789941 + L1MC4 LINE L1 7039 7746 -296 720 40 40 10 chr5 8840209 8840309 -190789841 - MER11A LTR ERVK -14 1252 1150 317 217 58 132 chr5 8840338 8840633 -190789517 + L1MC4 LINE L1 7763 8035 -7 215 324 88 29 chr5 8840641 8840777 -190789373 - MIR3 SINE MIR -31 177 34 510 266 56 0 chr5 8841490 8841633 -190788517 + MIR SINE MIR 5 155 -107 1100 173 16 8 chr5 8843553 8843796 -190786354 - L1MA8 LINE L1 -234 6057 5813 544 270 0 0 chr5 8845096 8845207 -190784943 - FLAM_A SINE Alu -30 112 2 270 221 176 0 chr5 8845254 8845322 -190784828 - MIR SINE MIR -115 147 68 360 245 11 0 chr5 8845610 8845704 -190784446 - MIR SINE MIR 0 262 168 533 115 10 0 chr5 8845711 8845815 -190784335 - HSMAR2 DNA Mariner -1 1301 1197 1301 155 14 9 chr5 8845822 8846035 -190784115 - AluJo SINE Alu -24 288 75 742 131 5 5 chr5 8846035 8846223 -190783927 - HSMAR2 DNA Mariner -94 1208 918 3348 78 36 0 chr5 8896226 8896699 -190733451 + THE1A-int LTR MaLR 1091 1580 0 2228 90 11 74 chr5 8896701 8897078 -190733072 + THE1A LTR MaLR 3 355 0 1708 219 56 16 chr5 8897183 8897631 -190732519 + MLT1C LTR MaLR 1 466 -1 2350 81 0 0 chr5 8897722 8898019 -190732131 - AluY SINE Alu -12 299 3 205 220 121 33 chr5 8898319 8898410 -190731740 + MIR SINE MIR 132 230 -32 856 278 16 20 chr5 8898937 8899189 -190730961 + MIR SINE MIR 12 262 0 2158 115 0 7 chr5 8899265 8899586 -190730564 + AluSx SINE Alu 1 319 0 215 247 146 34 chr5 8900106 8900195 -190729955 - MIR SINE MIR -7 255 157 22 35 0 0 chr5 8901979 8902008 -190728142 + AT_rich Low_complexity Low_complexity 1 29 0 15498 129 19 32 chr5 8902039 8904803 -190725347 + Tigger4(Zombi) DNA MER2_type 1 2726 -5 21 0 0 0 chr5 8905551 8905572 -190724578 + AT_rich Low_complexity Low_complexity 1 21 0 489 143 44 15 chr5 8906361 8906704 -190723446 + (TAGA)n Simple_repeat Simple_repeat 1 353 0 1519 233 69 2 chr5 8906705 8907112 -190723038 - MLT2B1 LTR ERVL -56 464 31 21 0 0 0 chr5 8908014 8908035 -190722115 + AT_rich Low_complexity Low_complexity 1 21 0 182 286 0 0 chr5 8908607 8908642 -190721508 - L2 LINE L2 -94 3178 3144 1549 206 125 20 chr5 8908683 8909140 -190721010 + MLT1D LTR MaLR 1 505 0 1036 190 156 50 chr5 8909216 8909574 -190720576 - MSTD LTR MaLR 0 396 1 189 281 74 44 chr5 8909781 8909896 -190720254 - MIR SINE MIR -69 139 63 1071 268 17 0 chr5 8909995 8910286 -190719864 + LTR16A LTR ERVL 155 450 0 2647 188 39 26 chr5 8911976 8912009 -190718141 + L1MB8 LINE L1 5298 5329 -849 1947 144 32 32 chr5 8912009 8912384 -190717766 - THE1C LTR MaLR 0 375 1 2647 188 39 26 chr5 8912384 8913003 -190717147 + L1MB8 LINE L1 5329 5967 -211 314 161 46 146 chr5 8913429 8913595 -190716555 - L1P4 LINE L1 -314 5860 5711 302 183 0 14 chr5 8913588 8913659 -190716491 + L1MA9 LINE L1 6090 6159 -153 * 235 94 62 62 chr5 8913676 8913740 -190716410 + L1MA9 LINE L1 6239 6302 -10 245 155 12 119 chr5 8914047 8914131 -190716019 + L1MB7 LINE L1 5933 6007 -171 2291 128 14 8 chr5 8914858 8915211 -190714939 + THE1A LTR MaLR 1 355 0 689 51 31 0 chr5 8915211 8915309 -190714841 + THE1A-int LTR MaLR 1 101 -1479 24 0 0 0 chr5 8916338 8916362 -190713788 + AT_rich Low_complexity Low_complexity 1 24 0 4706 205 30 29 chr5 8916892 8918190 -190711960 - L1MD2 LINE L1 -1 6358 5058 207 0 0 0 chr5 8918190 8918213 -190711937 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 4706 205 30 29 chr5 8918213 8918478 -190711672 - L1MD2 LINE L1 -1301 5058 4795 3021 147 30 63 chr5 8918616 8919249 -190710901 + LTR9 LTR ERV1 1 612 0 268 250 9 9 chr5 8919271 8919379 -190710771 + (CATATA)n Simple_repeat Simple_repeat 5 112 0 1730 185 3 10 chr5 8919486 8919784 -190710366 + AluJb SINE Alu 1 296 -16 231 125 0 0 chr5 8920519 8920559 -190709591 + (GA)n Simple_repeat Simple_repeat 1 40 0 1380 195 24 7 chr5 8921413 8921700 -190708450 - L1MC1 LINE L1 -6 6327 6036 2123 139 15 22 chr5 8921729 8922133 -190708017 - L1MC1 LINE L1 -276 6057 5657 3522 116 10 48 chr5 8922133 8922756 -190707394 - LTR14B LTR ERVK 0 608 10 2599 193 16 10 chr5 8922756 8923692 -190706458 - L1MC1 LINE L1 -677 5656 4713 2093 144 0 7 chr5 8923692 8923997 -190706153 - AluSc SINE Alu -6 303 1 2599 193 16 10 chr5 8923997 8924082 -190706068 - L1MC1 LINE L1 -1620 4713 4630 372 291 51 17 chr5 8924186 8924303 -190705847 + MER5C DNA MER1_type 4 124 -200 280 87 0 0 chr5 8924329 8924375 -190705775 + MER5C DNA MER1_type 233 278 -46 635 183 23 11 chr5 8925852 8926027 -190704123 + GA-rich Low_complexity Low_complexity 3 179 0 890 193 23 6 chr5 8926071 8926242 -190703908 - MER2 DNA MER2_type -171 174 1 980 156 92 29 chr5 8928367 8928605 -190701545 + MLT1D LTR MaLR 253 505 0 424 241 40 125 chr5 8928755 8929107 -190701043 + MLT1K LTR MaLR 151 472 -116 218 193 35 35 chr5 8929559 8929616 -190700534 - MIR SINE MIR -101 161 105 2754 238 36 13 chr5 8931034 8931829 -190698321 - L1ME2 LINE L1 -9 6155 5342 855 121 0 13 chr5 8931829 8931978 -190698172 + MER4A LTR ERV1 1 147 -517 1604 108 62 22 chr5 8932004 8932345 -190697805 + MER4A LTR ERV1 252 664 0 1229 246 59 60 chr5 8932345 8932949 -190697201 - L1ME2 LINE L1 -801 5345 4741 2345 75 0 16 chr5 8932949 8933257 -190696893 + AluY SINE Alu 9 311 0 1229 246 59 60 chr5 8933257 8933397 -190696753 - L1ME2 LINE L1 -1405 4741 4602 1971 208 27 0 chr5 8933580 8934055 -190696095 + Charlie1 DNA MER1_type 2207 2694 -67 2353 151 89 5 chr5 8935340 8935731 -190694419 + MSTB LTR MaLR 3 426 0 188 368 11 0 chr5 8936619 8936706 -190693444 - L2 LINE L2 -5 3308 3221 273 135 0 0 chr5 8936844 8936896 -190693254 + (CCA)n Simple_repeat Simple_repeat 1 52 0 1980 89 63 7 chr5 8937214 8937483 -190692667 + AluSc SINE Alu 1 284 -25 24 53 0 0 chr5 8938696 8938734 -190691416 + AT_rich Low_complexity Low_complexity 1 38 0 2554 43 7 7 chr5 8938824 8939127 -190691023 - AluY SINE Alu -8 303 1 230 79 0 26 chr5 8939996 8940034 -190690116 + (TTTC)n Simple_repeat Simple_repeat 3 39 0 194 335 57 10 chr5 8940382 8940495 -190689655 - MIR SINE MIR -82 126 6 692 241 22 0 chr5 8943135 8943272 -190686878 - AluJo SINE Alu -171 141 2 22 56 0 0 chr5 8943456 8943492 -190686658 + AT_rich Low_complexity Low_complexity 1 36 0 2410 246 104 15 chr5 8943618 8944672 -190685478 - L1ME2 LINE L1 -40 6518 5373 558 295 80 20 chr5 8944677 8945088 -190685062 - L1ME2 LINE L1 -3706 2834 2401 713 246 108 38 chr5 8945206 8945491 -190684659 - L1ME2 LINE L1 -4292 2429 2165 1844 160 7 0 chr5 8945491 8945791 -190684359 - AluSx SINE Alu -5 307 6 713 246 108 38 chr5 8945791 8945978 -190684172 - L1ME2 LINE L1 -4556 2165 1874 21 0 0 0 chr5 8946110 8946131 -190684019 + AT_rich Low_complexity Low_complexity 1 21 0 415 238 113 61 chr5 8947578 8947809 -190682341 + MLT1L LTR MaLR 8 250 -365 33 0 0 0 chr5 8949005 8949038 -190681112 + AT_rich Low_complexity Low_complexity 1 33 0 189 49 24 49 chr5 8949143 8949184 -190680966 + (TAA)n Simple_repeat Simple_repeat 2 41 0 190 106 43 0 chr5 8949219 8949266 -190680884 + (TA)n Simple_repeat Simple_repeat 2 50 0 268 188 27 20 chr5 8949324 8949473 -190680677 + (TA)n Simple_repeat Simple_repeat 1 150 0 2139 129 40 35 chr5 8949555 8949928 -190680222 - THE1C LTR MaLR 0 375 1 1602 181 0 11 chr5 8950917 8951194 -190678956 - AluJb SINE Alu -38 274 1 21 89 0 0 chr5 8951830 8951886 -190678264 + AT_rich Low_complexity Low_complexity 1 56 0 2224 94 3 13 chr5 8953578 8953876 -190676274 - AluSg SINE Alu -15 295 1 408 315 31 8 chr5 8954394 8954521 -190675629 - L2 LINE L2 0 3313 3184 29 0 0 0 chr5 8954675 8954704 -190675446 + AT_rich Low_complexity Low_complexity 1 29 0 245 346 53 45 chr5 8954783 8954916 -190675234 - MIR3 SINE MIR -26 182 49 482 259 0 0 chr5 8956451 8956559 -190673591 - MER45A DNA AcHobo 0 178 71 21 57 0 0 chr5 8960002 8960037 -190670113 + GC_rich Low_complexity Low_complexity 1 35 0 32 57 0 0 chr5 8960983 8961036 -190669114 + GC_rich Low_complexity Low_complexity 1 53 0 252 0 0 0 chr5 8962199 8962227 -190667923 + (T)n Simple_repeat Simple_repeat 1 28 0 21 0 0 0 chr5 8962449 8962470 -190667680 + AT_rich Low_complexity Low_complexity 1 21 0 246 315 48 67 chr5 8962883 8963048 -190667102 - L3b LINE CR1 -237 1346 1185 180 241 37 56 chr5 8963333 8963387 -190666763 - MIR SINE MIR -85 123 71 211 333 71 0 chr5 8964532 8964631 -190665519 - L2 LINE L2 -21 3292 3187 183 220 0 0 chr5 8964676 8964726 -190665424 + T-rich Low_complexity Low_complexity 1 50 0 671 248 171 5 chr5 8965743 8965965 -190664185 + MIR SINE MIR 1 259 -3 348 231 0 0 chr5 8966043 8966108 -190664042 - MIR SINE MIR -63 145 81 180 111 0 0 chr5 8967869 8967896 -190662254 + (TG)n Simple_repeat Simple_repeat 2 28 0 25 31 0 0 chr5 8968025 8968057 -190662093 + AT_rich Low_complexity Low_complexity 1 32 0 351 0 0 0 chr5 8968691 8968730 -190661420 + (CA)n Simple_repeat Simple_repeat 2 40 0 482 270 182 35 chr5 8968787 8969105 -190661045 - L1M4 LINE L1 -2660 3486 3122 403 293 55 85 chr5 8969111 8969417 -190660733 - MLT1I LTR MaLR -4 405 109 1434 271 125 17 chr5 8969417 8969952 -190660198 - MLT1G1 LTR MaLR 0 595 3 343 275 54 83 chr5 8970000 8970512 -190659638 - MLT1H LTR MaLR 0 549 15 1774 167 3 7 chr5 8970614 8970913 -190659237 - AluJb SINE Alu -14 298 1 413 232 36 58 chr5 8971830 8971968 -190658182 - ERVL LTR ERVL -2316 3448 3314 1011 133 40 96 chr5 8972051 8972300 -190657850 - THE1C LTR MaLR 0 375 141 268 103 0 0 chr5 8972276 8972315 -190657835 - THE1C LTR MaLR -389 39 1 * 747 266 75 50 chr5 8972356 8972618 -190657532 - MLT2E LTR ERVL -259 369 96 2113 115 3 16 chr5 8972618 8972923 -190657227 - AluSc SINE Alu -8 301 1 747 266 75 50 chr5 8972923 8972979 -190657171 - MLT2E LTR ERVL -532 96 43 2107 116 7 0 chr5 8973137 8973421 -190656729 - AluSx SINE Alu -26 286 1 4908 81 11 5 chr5 8973472 8974136 -190656014 + L1PA13 LINE L1 5476 6143 -20 180 0 0 0 chr5 8974141 8974161 -190655989 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 455 328 51 38 chr5 8974166 8974638 -190655512 - L1M4 LINE L1 -3235 2911 2434 26 0 0 0 chr5 8974996 8975022 -190655128 + AT_rich Low_complexity Low_complexity 1 26 0 200 227 0 0 chr5 8975082 8975126 -190655024 + A-rich Low_complexity Low_complexity 1 44 0 480 207 178 65 chr5 8976201 8976370 -190653780 + ORSL DNA AcHobo 81 268 -7 2702 17 0 0 chr5 8976547 8976845 -190653305 + AluYa5 SINE Alu 1 298 -13 392 243 84 99 chr5 8977492 8977694 -190652456 + MIR SINE MIR 20 218 -44 2456 52 3 16 chr5 8978042 8978351 -190651799 - AluY SINE Alu -6 305 1 315 143 26 13 chr5 8979668 8979745 -190650405 - L1MA7 LINE L1 -1 6290 6213 903 162 61 18 chr5 8979774 8980002 -190650148 - L1MA7 LINE L1 -22 6269 6032 299 333 42 17 chr5 8980917 8981037 -190649113 + MIR3 SINE MIR 65 187 -21 234 320 91 28 chr5 8981233 8981486 -190648664 + L1M4 LINE L1 4122 4390 -1756 231 276 48 35 chr5 8981965 8982110 -190648040 - L1M4 LINE L1 -1712 4434 4288 222 295 121 54 chr5 8982407 8982631 -190647519 + L2 LINE L2 3029 3267 -46 203 303 0 0 chr5 8982689 8982755 -190647395 + T-rich Low_complexity Low_complexity 3 68 0 2385 98 3 0 chr5 8983401 8983706 -190646444 - AluSg SINE Alu -4 306 1 1093 279 77 68 chr5 8983971 8984504 -190645646 - MER77 LTR ERV1 -6 599 62 257 266 266 23 chr5 8984605 8984778 -190645372 - MIR SINE MIR -33 229 15 734 189 128 36 chr5 8984786 8984982 -190645168 + MER20 DNA MER1_type 3 216 -3 1400 184 96 55 chr5 8985952 8986391 -190643759 - MLT1C LTR MaLR -9 458 2 271 28 0 0 chr5 8986576 8986612 -190643538 + MADE1 DNA Mariner 3 38 -42 246 32 0 0 chr5 8986865 8986896 -190643254 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 808 156 0 30 chr5 8986960 8987095 -190643055 - FLAM_C SINE Alu -2 131 1 2692 82 8 14 chr5 8988090 8988456 -190641694 + THE1B LTR MaLR 1 364 0 468 226 17 0 chr5 8988718 8988833 -190641317 + L1PB4 LINE L1 6038 6154 -2 198 365 12 12 chr5 8988859 8988944 -190641206 + L2 LINE L2 3229 3313 0 645 306 54 0 chr5 8989015 8989201 -190640949 - MIR SINE MIR -33 229 34 1650 190 39 33 chr5 8991032 8991395 -190638755 - MLT1A1 LTR MaLR 0 365 1 1392 198 89 51 chr5 8991726 8992025 -190638125 - MLT1C LTR MaLR 0 467 144 2284 116 47 11 chr5 8992025 8992387 -190637763 - THE1C LTR MaLR 0 375 1 1392 198 89 51 chr5 8992387 8992537 -190637613 - MLT1C LTR MaLR -323 144 1 664 239 23 11 chr5 8992657 8992833 -190637317 - MER45A DNA AcHobo 0 178 1 1073 280 40 23 chr5 8993447 8993770 -190636380 + L1ME LINE L1 55 390 -6006 216 0 0 0 chr5 8993770 8993794 -190636356 + (GA)n Simple_repeat Simple_repeat 2 25 0 1073 280 40 23 chr5 8993794 8993941 -190636209 + L1ME LINE L1 390 533 -5863 1716 256 42 7 chr5 8993957 8995208 -190634942 + L1ME LINE L1 2460 3815 -2400 276 125 0 42 chr5 8995255 8995327 -190634823 + (TA)n Simple_repeat Simple_repeat 1 69 0 326 287 45 38 chr5 8995331 8995488 -190634662 + L1ME LINE L1 3837 3994 -2221 2170 238 39 70 chr5 8995522 8996587 -190633563 + L1ME LINE L1 4440 5472 -743 1407 227 120 74 chr5 8996588 8997307 -190632843 + LTR1B LTR ERV1 1 752 -74 281 333 8 0 chr5 8997417 8997543 -190632607 + L1ME LINE L1 5465 5591 -644 * 570 207 9 0 chr5 8997529 8997672 -190632478 + L1MA10 LINE L1 5996 6299 -35 23 0 0 0 chr5 8998067 8998090 -190632060 + AT_rich Low_complexity Low_complexity 1 23 0 236 229 0 0 chr5 8998460 8998521 -190631629 + L1M4 LINE L1 4768 4828 -1318 269 272 22 29 chr5 8998972 8999108 -190631042 + L1M4 LINE L1 5696 5830 -348 380 238 0 0 chr5 9000749 9000829 -190629321 - MER82 DNA MER2_type -1 652 573 809 229 71 0 chr5 9000846 9001056 -190629094 - MER82 DNA MER2_type -426 227 3 349 299 107 22 chr5 9002175 9002399 -190627751 + MIR SINE MIR 17 259 -3 349 287 7 60 chr5 9003043 9003193 -190626957 - L2 LINE L2 -54 3259 3118 354 318 127 5 chr5 9003359 9003548 -190626602 + MIR SINE MIR 37 248 -14 2152 124 26 3 chr5 9003925 9004273 -190625877 - THE1B LTR MaLR 0 364 9 315 0 0 0 chr5 9004285 9004320 -190625830 + (CA)n Simple_repeat Simple_repeat 2 36 0 265 296 14 0 chr5 9005664 9005735 -190624415 - MIR SINE MIR -86 176 105 23 54 0 0 chr5 9006155 9006192 -190623958 + AT_rich Low_complexity Low_complexity 1 37 0 350 228 13 0 chr5 9006292 9006371 -190623779 + MER63 DNA MER1_type 44 749 -313 433 286 26 87 chr5 9006387 9006408 -190623742 - L1MC5 LINE L1 -264 7697 7676 1549 213 20 25 chr5 9006408 9006807 -190623343 + MLT2C1 LTR ERVL 1 397 0 433 286 26 87 chr5 9006807 9007212 -190622938 - L1MC5 LINE L1 -285 7676 7297 271 301 41 10 chr5 9007680 9007876 -190622274 - L1MC4 LINE L1 -994 7048 6847 307 362 50 14 chr5 9007888 9008029 -190622121 - L1MC4a LINE L1 -1120 6688 6543 2546 43 40 0 chr5 9008129 9008428 -190621722 + AluY SINE Alu 1 311 0 2499 51 0 6 chr5 9008860 9009171 -190620979 - AluY SINE Alu 0 311 3 772 265 133 27 chr5 9009195 9009880 -190620270 - L1MC4a LINE L1 -748 5398 5128 355 318 74 37 chr5 9010179 9010478 -190619672 - L1MC4a LINE L1 -1437 4709 4400 289 307 23 39 chr5 9010667 9010976 -190619174 - L1MC4a LINE L1 -1929 4217 3914 24 32 0 0 chr5 9011081 9011112 -190619038 + AT_rich Low_complexity Low_complexity 1 31 0 352 158 0 0 chr5 9011225 9011282 -190618868 + FLAM SINE Alu 61 117 -16 426 20 0 0 chr5 9011285 9011336 -190618814 + (CATA)n Simple_repeat Simple_repeat 2 52 0 5308 81 28 4 chr5 9013224 9013973 -190616177 - L1PA11 LINE L1 0 6174 5408 11694 134 25 21 chr5 9014424 9016493 -190613657 + Tigger1 DNA MER2_type 2 2078 -340 5413 146 10 24 chr5 9016516 9016645 -190613505 - L1PB3 LINE L1 0 6154 6025 2283 109 3 6 chr5 9016645 9016957 -190613193 - AluSx SINE Alu -1 311 1 5413 146 10 24 chr5 9016957 9018150 -190612000 - L1PB3 LINE L1 -129 6025 4853 311 83 0 0 chr5 9018150 9018198 -190611952 + Tigger1 DNA MER2_type 2068 2115 -303 3938 142 14 7 chr5 9018205 9018911 -190611239 - MER50 LTR ERV1 -23 711 1 1285 184 83 0 chr5 9018911 9019186 -190610964 + Tigger1 DNA MER2_type 2118 2415 -3 328 281 87 58 chr5 9019591 9019833 -190610317 - L1ME LINE L1 -336 5785 5537 386 165 65 24 chr5 9020376 9020546 -190609604 + (TA)n Simple_repeat Simple_repeat 1 177 0 28 0 0 0 chr5 9020548 9020576 -190609574 + AT_rich Low_complexity Low_complexity 1 28 0 47 19 0 0 chr5 9020701 9020755 -190609395 + AT_rich Low_complexity Low_complexity 1 54 0 23 54 0 0 chr5 9020872 9020909 -190609241 + AT_rich Low_complexity Low_complexity 1 37 0 773 225 11 16 chr5 9021686 9021873 -190608277 + MER5A DNA MER1_type 1 186 -3 676 218 262 17 chr5 9021984 9022393 -190607757 - MLT1H LTR MaLR -2 547 39 2352 90 3 0 chr5 9024525 9024835 -190605315 - AluY SINE Alu 0 311 1 954 192 0 0 chr5 9024985 9025136 -190605014 - AluJb SINE Alu -19 293 143 234 285 102 54 chr5 9025902 9026088 -190604062 - MLT1J LTR MaLR -294 217 23 226 303 86 40 chr5 9027890 9028042 -190602108 - L3 LINE CR1 -715 862 704 192 323 15 0 chr5 9028163 9028228 -190601922 - MIR3 SINE MIR -42 166 101 186 43 0 0 chr5 9028368 9028391 -190601759 + (A)n Simple_repeat Simple_repeat 1 23 0 217 242 91 0 chr5 9028722 9028788 -190601362 - L2 LINE L2 -526 2788 2717 1134 258 56 12 chr5 9028920 9029330 -190600820 + MLT1H1 LTR MaLR 134 554 -1 350 336 69 42 chr5 9029538 9029611 -190600539 + L2 LINE L2 2283 2353 -961 2077 122 84 29 chr5 9029611 9029954 -190600196 - THE1B LTR MaLR -2 362 1 350 336 69 42 chr5 9029954 9030142 -190600008 + L2 LINE L2 2353 2551 -763 21 0 0 0 chr5 9031031 9031052 -190599098 + AT_rich Low_complexity Low_complexity 1 21 0 651 291 36 4 chr5 9031077 9031328 -190598822 - MIR SINE MIR -1 261 3 335 213 0 27 chr5 9031637 9031712 -190598438 + Tigger5 DNA MER2_type 20 92 -2231 446 167 0 0 chr5 9031761 9031839 -190598311 + Tigger5 DNA MER2_type 2246 2323 0 376 262 56 0 chr5 9031857 9031964 -190598186 - MIR SINE MIR -148 114 2 352 277 132 76 chr5 9033857 9034358 -190595792 - L1ME4a LINE L1 0 6121 5593 180 77 0 0 chr5 9034597 9034623 -190595527 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 296 178 40 53 chr5 9035207 9035359 -190594791 + (TTATA)n Simple_repeat Simple_repeat 5 154 0 216 97 0 0 chr5 9035376 9035407 -190594743 + (TG)n Simple_repeat Simple_repeat 2 32 0 1965 267 112 48 chr5 9035423 9037906 -190592244 - L1MCa LINE L1 -3403 3538 620 2533 175 24 0 chr5 9037906 9038328 -190591822 - MSTB1 LTR MaLR 0 432 1 1965 267 112 48 chr5 9038328 9038929 -190591221 - L1MCa LINE L1 -6321 620 59 443 274 50 11 chr5 9039522 9039701 -190590449 - LTR33 LTR ERVL -2 519 334 248 305 92 0 chr5 9039797 9039938 -190590212 - LTR33 LTR ERVL -355 166 13 2170 118 0 0 chr5 9040126 9040422 -190589728 - AluSq SINE Alu -16 297 2 410 297 101 9 chr5 9040424 9040643 -190589507 - L2 LINE L2 -775 2539 2301 22 35 0 0 chr5 9043715 9043744 -190586406 + AT_rich Low_complexity Low_complexity 1 29 0 2711 139 13 13 chr5 9044192 9044644 -190585506 - L1MA2 LINE L1 0 6304 5853 6172 99 17 1 chr5 9044644 9045514 -190584636 + L1PA13 LINE L1 5279 6162 -1 3659 150 39 33 chr5 9045522 9045998 -190584152 - L1MA2 LINE L1 -447 5858 5387 2361 90 0 3 chr5 9045998 9046309 -190583841 - AluY SINE Alu -1 310 1 3659 150 39 33 chr5 9046309 9046519 -190583631 - L1MA2 LINE L1 -918 5387 5163 216 0 0 0 chr5 9046519 9046543 -190583607 + (TG)n Simple_repeat Simple_repeat 1 24 0 3659 150 39 33 chr5 9046543 9046716 -190583434 - L1MA2 LINE L1 -1142 5163 4993 1322 144 22 51 chr5 9046872 9047226 -190582924 - L1M1 LINE L1 -743 5403 5108 4481 132 28 74 chr5 9047226 9048056 -190582094 + L1MA4 LINE L1 5497 6292 -8 740 294 167 27 chr5 9049289 9049727 -190580423 + L2 LINE L2 1354 1852 -1462 288 250 0 54 chr5 9049801 9049893 -190580257 + L2 LINE L2 1867 1953 -1361 260 314 20 20 chr5 9050269 9050422 -190579728 + L1ME LINE L1 5526 5678 -443 21 36 0 0 chr5 9050698 9050726 -190579424 + AT_rich Low_complexity Low_complexity 1 28 0 215 353 147 0 chr5 9052188 9052304 -190577846 + L2 LINE L2 3114 3246 -26 2039 142 31 0 chr5 9052803 9053127 -190577023 + THE1B LTR MaLR 1 334 -30 1368 113 26 0 chr5 9054122 9054316 -190575834 + THE1B LTR MaLR 133 331 -33 327 191 0 0 chr5 9055248 9055316 -190574834 + (CA)n Simple_repeat Simple_repeat 2 69 0 980 106 0 14 chr5 9055872 9056014 -190574136 - AluSg/x SINE Alu -17 293 154 22 56 0 0 chr5 9056345 9056381 -190573769 + AT_rich Low_complexity Low_complexity 1 36 0 274 361 57 15 chr5 9058815 9059078 -190571072 + L2 LINE L2 2623 2896 -418 340 347 15 10 chr5 9061094 9061293 -190568857 + MIR SINE MIR 63 262 0 2621 65 0 0 chr5 9062855 9063163 -190566987 - AluY SINE Alu -3 308 1 902 260 13 0 chr5 9063168 9063395 -190566755 + L1ME3A LINE L1 5522 5751 -419 810 116 7 87 chr5 9063495 9063633 -190566517 - AluSc SINE Alu -161 148 22 372 310 9 0 chr5 9063730 9063846 -190566304 + L1ME3A LINE L1 6049 6165 -5 642 60 0 0 chr5 9064006 9064089 -190566061 + (TA)n Simple_repeat Simple_repeat 2 84 0 232 244 89 0 chr5 9064258 9064348 -190565802 + L1M4c LINE L1 2382 2479 -3905 667 178 6 57 chr5 9064378 9064535 -190565615 - L1MC3 LINE L1 -875 6910 6762 2627 208 15 4 chr5 9064570 9065105 -190565045 + L1MC3 LINE L1 6994 7534 -251 365 298 67 6 chr5 9065107 9065285 -190564865 + L1MC4a LINE L1 6591 6779 -1029 24 53 0 0 chr5 9065472 9065510 -190564640 + AT_rich Low_complexity Low_complexity 1 38 0 293 308 47 0 chr5 9067418 9067525 -190562625 + L2 LINE L2 3201 3312 -1 219 316 60 8 chr5 9067890 9068016 -190562134 + MIR SINE MIR 11 143 -66 21 0 0 0 chr5 9068644 9068665 -190561485 + AT_rich Low_complexity Low_complexity 1 21 0 443 154 22 0 chr5 9068980 9069071 -190561079 - AluJb SINE Alu 0 312 220 * 720 208 0 0 chr5 9069065 9069185 -190560965 - AluJb SINE Alu -191 121 2 24 0 0 0 chr5 9069199 9069223 -190560927 + AT_rich Low_complexity Low_complexity 1 24 0 1906 149 0 36 chr5 9069253 9069561 -190560589 - AluJb SINE Alu -15 297 1 23 33 0 0 chr5 9070325 9070355 -190559795 + AT_rich Low_complexity Low_complexity 1 30 0 2068 44 52 0 chr5 9071167 9071417 -190558733 - AluY SINE Alu -1 310 48 1538 22 0 16 chr5 9071614 9071799 -190558351 + AluYa5 SINE Alu 120 301 -10 226 237 10 82 chr5 9072168 9072265 -190557885 + MIR SINE MIR 52 141 -121 234 114 45 0 chr5 9072645 9072689 -190557461 - MLT1J2 LTR MaLR -34 416 371 345 318 7 39 chr5 9072879 9073033 -190557117 - MLT1H LTR MaLR -307 242 94 386 256 22 0 chr5 9074817 9074907 -190555243 - MER5A DNA MER1_type -85 104 13 258 336 99 15 chr5 9075448 9075579 -190554571 - L2 LINE L2 -1 3312 3171 28 29 0 0 chr5 9075586 9075621 -190554529 + AT_rich Low_complexity Low_complexity 1 35 0 297 0 0 0 chr5 9075742 9075775 -190554375 + (CA)n Simple_repeat Simple_repeat 2 34 0 321 68 0 0 chr5 9075775 9075819 -190554331 + (GA)n Simple_repeat Simple_repeat 1 44 0 1439 175 61 61 chr5 9077200 9077594 -190552556 + MLT1C LTR MaLR 1 394 -73 309 261 169 72 chr5 9078279 9078528 -190551622 - L2 LINE L2 -11 3302 3030 328 238 61 62 chr5 9078694 9078884 -190551266 + L1MC4a LINE L1 5748 5939 -182 259 320 10 10 chr5 9079160 9079257 -190550893 - MLT1I LTR MaLR -309 100 4 187 336 133 8 chr5 9081401 9081529 -190548621 + L2 LINE L2 3126 3269 -3 2264 200 90 24 chr5 9082221 9082796 -190547354 - L1MB5 LINE L1 -8 6166 5554 21 36 0 0 chr5 9083869 9083897 -190546253 + AT_rich Low_complexity Low_complexity 1 28 0 655 186 9 0 chr5 9084706 9084937 -190545213 - L1MA9 LINE L1 -22 6290 5962 2331 53 0 86 chr5 9085178 9085516 -190544634 + AluY SINE Alu 1 309 -2 1699 271 52 17 chr5 9086790 9087476 -190542674 - L1MC4 LINE L1 -1 8041 7252 1046 225 166 103 chr5 9087477 9087557 -190542593 - L1MC4 LINE L1 -957 7085 7011 208 0 0 0 chr5 9087557 9087580 -190542570 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2000 124 3 17 chr5 9087580 9087870 -190542280 - AluSx SINE Alu -1 308 1 1046 225 166 103 chr5 9087870 9088219 -190541931 - L1MC4 LINE L1 -1031 7011 6606 192 40 0 0 chr5 9088219 9088244 -190541906 + (TG)n Simple_repeat Simple_repeat 2 26 0 1046 225 166 103 chr5 9088244 9088402 -190541748 - L1MC4 LINE L1 -1436 6606 6459 214 241 0 35 chr5 9088847 9088876 -190541274 + GA-rich Low_complexity Low_complexity 2 30 -27 1680 164 43 0 chr5 9088876 9089181 -190540969 + L1MA4 LINE L1 5983 6300 0 214 241 0 35 chr5 9089181 9089209 -190540941 + GA-rich Low_complexity Low_complexity 30 57 0 200 276 69 52 chr5 9089577 9089635 -190540515 + L2 LINE L2 3148 3206 -66 232 328 47 16 chr5 9091748 9091876 -190538274 + MIR SINE MIR 129 260 -2 967 282 103 3 chr5 9092229 9092616 -190537534 + LTR16A LTR ERVL 25 450 0 230 264 99 33 chr5 9092616 9092707 -190537443 + MIR SINE MIR 81 177 -85 638 199 0 73 chr5 9092980 9093116 -190537034 - FRAM SINE Alu -43 133 8 389 280 143 32 chr5 9093339 9093528 -190536622 + L2 LINE L2 2882 3091 -181 1172 231 46 53 chr5 9093995 9094406 -190535744 - MLT1C LTR MaLR -1 466 59 189 0 0 0 chr5 9095277 9095298 -190534852 + (TTTTTG)n Simple_repeat Simple_repeat 2 22 0 251 238 50 38 chr5 9095506 9095586 -190534564 - MIR SINE MIR 0 262 182 644 143 6 34 chr5 9095597 9095772 -190534378 + (TA)n Simple_repeat Simple_repeat 1 170 0 560 309 133 17 chr5 9095886 9096429 -190533721 - L1M4 LINE L1 -2752 3394 2789 1969 114 0 7 chr5 9097676 9097949 -190532201 - AluSq SINE Alu -8 305 35 182 391 0 17 chr5 9098330 9098445 -190531705 + L3b LINE CR1 1119 1231 -352 678 332 26 142 chr5 9099345 9099571 -190530579 + L1PA7 LINE L1 5867 6066 -88 184 186 0 23 chr5 9100740 9100783 -190529367 + L2 LINE L2 3186 3227 -86 486 319 86 9 chr5 9100898 9101130 -190529020 + MIR SINE MIR 10 259 -3 2377 113 3 0 chr5 9101522 9101833 -190528317 - AluSx SINE Alu 0 312 1 21 0 0 0 chr5 9102023 9102044 -190528106 + AT_rich Low_complexity Low_complexity 1 21 0 567 272 62 5 chr5 9102326 9102521 -190527629 - MER58A DNA MER1_type 0 224 19 2036 75 30 0 chr5 9102702 9102969 -190527181 + L1PA12 LINE L1 5845 6119 -49 203 396 43 40 chr5 9104101 9104475 -190525675 + L3 LINE CR1 403 777 -800 302 280 167 18 chr5 9104669 9104837 -190525313 - MIR SINE MIR -42 220 28 294 239 14 0 chr5 9105118 9105189 -190524961 + MIR3 SINE MIR 128 199 -9 1084 184 34 5 chr5 9105334 9105541 -190524609 - MLT2C1 LTR ERVL -184 213 1 740 239 54 47 chr5 9105542 9105842 -190524308 - ERVL LTR ERVL -2 5755 5380 26 74 0 0 chr5 9105978 9106032 -190524118 + AT_rich Low_complexity Low_complexity 1 54 0 312 73 455 0 chr5 9106249 9106304 -190523846 + MADE1 DNA Mariner 1 80 0 2416 71 0 16 chr5 9106395 9106703 -190523447 + AluY SINE Alu 1 303 -8 1079 231 30 24 chr5 9106891 9107340 -190522810 - MLT1D LTR MaLR -1 504 4 237 116 47 23 chr5 9107341 9107384 -190522766 - MLT1D LTR MaLR -453 52 9 376 290 75 37 chr5 9107681 9107895 -190522255 - MLT1E LTR MaLR -367 226 5 363 318 99 10 chr5 9108991 9109183 -190520967 - MIR SINE MIR -9 253 45 284 315 56 49 chr5 9109499 9109661 -190520489 + L2 LINE L2 2985 3147 -125 229 262 29 10 chr5 9110961 9111064 -190519086 + (TA)n Simple_repeat Simple_repeat 2 106 0 570 256 73 55 chr5 9111805 9112094 -190518056 - MLT1I LTR MaLR -2 407 114 184 318 78 61 chr5 9113523 9113768 -190516382 + L2 LINE L2 2864 3112 -160 228 135 0 0 chr5 9113768 9113805 -190516345 + (TTCC)n Simple_repeat Simple_repeat 3 39 0 284 351 38 0 chr5 9114055 9114186 -190515964 - MIR SINE MIR -71 191 56 299 317 10 0 chr5 9115924 9116028 -190514122 + L1ME2 LINE L1 6038 6142 -22 243 158 0 0 chr5 9117988 9118026 -190512124 - L2 LINE L2 0 3272 3235 273 29 0 0 chr5 9118586 9118620 -190511530 + (CA)n Simple_repeat Simple_repeat 1 34 0 286 204 0 0 chr5 9118683 9118694 -190511456 + MER3 DNA MER1_type 37 47 -162 384 244 57 16 chr5 9118694 9118817 -190511333 - MER3 DNA MER1_type 0 209 82 254 281 21 21 chr5 9118838 9118934 -190511216 - L1MC/D LINE L1 -2031 5777 5682 1683 173 62 7 chr5 9169223 9169530 -190460620 - MER58B DNA MER1_type -17 324 1 202 200 25 50 chr5 9170013 9170093 -190460057 + GA-rich Low_complexity Low_complexity 2 79 0 241 132 19 19 chr5 9170280 9170333 -190459817 + GA-rich Low_complexity Low_complexity 4 56 0 279 274 68 35 chr5 9172541 9172749 -190457401 - L1MC/D LINE L1 -734 5450 5256 295 277 70 78 chr5 9174405 9174647 -190455503 - L2 LINE L2 -4 3309 3070 684 309 85 32 chr5 9174757 9175132 -190455018 - L2 LINE L2 -473 2841 2447 258 240 53 13 chr5 9175364 9175439 -190454711 + L2 LINE L2 3159 3236 -77 1914 178 15 15 chr5 9176387 9176729 -190453421 + MER2 DNA MER2_type 2 343 -1 21 57 0 0 chr5 9176801 9176836 -190453314 + AT_rich Low_complexity Low_complexity 1 35 0 277 224 0 0 chr5 9177408 9177466 -190452684 + MIR SINE MIR 184 241 -21 214 255 20 0 chr5 9177482 9177533 -190452617 + (TTG)n Simple_repeat Simple_repeat 2 53 0 1840 153 0 33 chr5 9178243 9178550 -190451600 + AluJb SINE Alu 1 297 -15 265 211 28 0 chr5 9178755 9178826 -190451324 + L1MA7 LINE L1 6213 6285 -6 317 351 45 8 chr5 9179163 9179297 -190450853 + MER5A DNA MER1_type 3 141 -48 556 258 137 61 chr5 9179428 9179757 -190450393 + MLT1I LTR MaLR 52 405 -4 186 338 127 53 chr5 9180015 9180707 -190449443 - L2 LINE L2 -711 2603 1861 1251 235 101 38 chr5 9182572 9183015 -190447135 - MLT1C LTR MaLR -1 466 1 318 275 85 17 chr5 9183587 9183828 -190446322 - MLT1L LTR MaLR 0 597 248 246 62 0 0 chr5 9184531 9184563 -190445587 + (T)n Simple_repeat Simple_repeat 1 32 0 13093 17 0 13 chr5 9184564 9186904 -190443246 - L1HS LINE L1 0 6155 3833 605 213 25 0 chr5 9186903 9187025 -190443125 + L1ME3A LINE L1 6038 6162 -8 * 1956 145 21 0 chr5 9189072 9189361 -190440789 + AluSx SINE Alu 1 295 -17 659 209 214 15 chr5 9189381 9189577 -190440573 - MER106A DNA MER1_type 0 236 2 347 240 24 72 chr5 9190100 9190225 -190439925 + L2 LINE L2 3195 3313 0 380 291 162 50 chr5 9190890 9191475 -190438675 - L2 LINE L2 -1036 2278 1628 449 211 106 33 chr5 9193130 9193310 -190436840 - LTR16A1 LTR ERVL 0 457 265 2287 59 0 53 chr5 9193507 9193811 -190436339 + AluY SINE Alu 1 288 -23 1105 32 0 0 chr5 9193816 9193942 -190436208 + L1PA5 LINE L1 6028 6153 -1 294 221 57 150 chr5 9194191 9194331 -190435819 - MER21B LTR ERV1 -187 676 550 443 291 53 89 chr5 9194357 9194687 -190435463 - MER21B LTR ERV1 -279 326 6 874 266 89 29 chr5 9195357 9195650 -190434500 + LTR33 LTR ERVL 16 339 -182 2429 107 133 13 chr5 9195650 9196032 -190434118 - MSTA LTR MaLR 0 428 1 874 266 89 29 chr5 9196032 9196118 -190434032 + LTR33 LTR ERVL 339 418 -103 28 48 0 0 chr5 9196329 9196371 -190433779 + AT_rich Low_complexity Low_complexity 1 42 0 1750 222 79 35 chr5 9196429 9196937 -190433213 + MER119 DNA MER1_type 54 583 0 1171 127 31 75 chr5 9197504 9197732 -190432418 + MLT1B LTR MaLR 1 218 -172 870 207 59 104 chr5 9197731 9198100 -190432050 + MLT1A1 LTR MaLR 10 428 0 * 839 174 47 0 chr5 9198100 9198243 -190431907 + MLT1B LTR MaLR 218 367 -23 280 300 47 33 chr5 9201875 9202025 -190428125 - L3 LINE CR1 -302 1275 1124 183 250 36 18 chr5 9202322 9202378 -190427772 + MIR SINE MIR 96 152 -110 22 0 0 0 chr5 9203036 9203058 -190427092 + AT_rich Low_complexity Low_complexity 1 22 0 202 208 30 79 chr5 9204569 9204670 -190425480 + (CA)n Simple_repeat Simple_repeat 1 96 0 194 291 89 25 chr5 9204785 9204864 -190425286 + MIR3 SINE MIR 110 193 -15 351 264 82 0 chr5 9205760 9205870 -190424280 + L1ME4a LINE L1 5513 5631 -490 406 289 104 66 chr5 9205874 9206327 -190423823 + L1ME4a LINE L1 5651 6120 -1 511 255 156 45 chr5 9206511 9206754 -190423396 - MLT1H LTR MaLR -241 308 39 2535 137 40 28 chr5 9207229 9207653 -190422497 - MSTB1 LTR MaLR 0 432 4 397 213 12 0 chr5 9208556 9208636 -190421514 - L2 LINE L2 -1 3312 3232 1327 220 19 38 chr5 9211255 9211559 -190418591 - MLT1D LTR MaLR 0 505 206 1643 159 17 30 chr5 9211559 9211861 -190418289 - AluSx SINE Alu -14 298 1 1327 220 19 38 chr5 9211861 9211874 -190418276 - MLT1D LTR MaLR -299 206 194 1163 215 12 32 chr5 9211864 9212110 -190418040 - MLT1D LTR MaLR -263 242 2 * 214 234 168 28 chr5 9212117 9212224 -190417926 - MIR SINE MIR -70 192 71 2454 71 0 16 chr5 9213918 9214226 -190415924 + AluSx SINE Alu 1 303 -9 1710 312 114 23 chr5 9215488 9216598 -190413552 - L2 LINE L2 -30 3283 2012 4584 190 76 8 chr5 9216598 9217440 -190412710 + MER54A LTR ERVL 3 901 0 1710 312 114 23 chr5 9217440 9217739 -190412411 - L2 LINE L2 -1301 2012 1742 1796 106 152 8 chr5 9217958 9218222 -190411928 + AluSx SINE Alu 1 302 0 27 49 0 0 chr5 9218502 9218543 -190411607 + AT_rich Low_complexity Low_complexity 1 41 0 2343 125 46 8 chr5 9219571 9219922 -190410228 + THE1B LTR MaLR 1 364 0 5490 133 16 10 chr5 9222352 9223390 -190406760 - L1PA16 LINE L1 -70 6096 5053 2464 126 36 0 chr5 9223390 9223779 -190406371 + L1PA15-16 LINE L1 2347 2749 -4100 22 0 0 0 chr5 9223791 9223813 -190406337 + AT_rich Low_complexity Low_complexity 1 22 0 24 32 0 0 chr5 9224723 9224754 -190405396 + AT_rich Low_complexity Low_complexity 1 31 0 25 65 0 0 chr5 9224809 9224855 -190405295 + AT_rich Low_complexity Low_complexity 1 46 0 424 306 32 19 chr5 9225820 9225977 -190404173 + MIR SINE MIR 17 175 -87 444 334 50 21 chr5 9226591 9226929 -190403221 + HAL1 LINE L1 1408 1755 -752 185 164 0 18 chr5 9227120 9227175 -190402975 + (TA)n Simple_repeat Simple_repeat 1 54 0 301 231 15 0 chr5 9228048 9228113 -190402037 + MIR SINE MIR 104 169 -93 271 318 12 0 chr5 9228803 9228888 -190401262 + MIR3 SINE MIR 112 197 -11 1241 272 139 18 chr5 9230380 9231022 -190399128 + L2 LINE L2 2095 2826 -488 291 71 0 0 chr5 9231022 9231064 -190399086 + (CA)n Simple_repeat Simple_repeat 1 42 0 1241 272 139 18 chr5 9231064 9231102 -190399048 + L2 LINE L2 2826 2858 -456 2634 79 18 147 chr5 9232050 9232559 -190397591 - MLT2A1 LTR ERVL 0 444 2 246 62 0 0 chr5 9232599 9232631 -190397519 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 2004 126 0 4 chr5 9232631 9232909 -190397241 - AluSc SINE Alu -32 277 1 201 255 0 20 chr5 9233730 9233781 -190396369 + GA-rich Low_complexity Low_complexity 3 52 0 1639 68 5 14 chr5 9234220 9234427 -190395723 + AluY SINE Alu 90 294 -17 537 272 380 19 chr5 9234702 9235389 -190394761 - L2 LINE L2 -920 2394 1460 1920 199 119 19 chr5 9236071 9236543 -190393607 - MLT2B1 LTR ERVL 0 520 2 2325 109 3 0 chr5 9236849 9237161 -190392989 - AluSq SINE Alu 0 313 1 1865 137 70 23 chr5 9237679 9238022 -190392128 + MER46B DNA MER2_type 3 236 0 315 0 0 0 chr5 9239207 9239242 -190390908 + (TG)n Simple_repeat Simple_repeat 2 36 0 877 141 82 0 chr5 9239259 9239394 -190390756 - AluSg/x SINE Alu -27 285 140 1446 217 113 29 chr5 9239477 9239859 -190390291 - MLT2D LTR ERVL 0 414 1 1297 229 4 0 chr5 9240748 9241019 -190389131 + L1PA16 LINE L1 5895 6166 0 549 99 0 0 chr5 9241022 9241103 -190389047 + (GGAA)n Simple_repeat Simple_repeat 3 83 0 2369 168 49 35 chr5 9241235 9241687 -190388463 - MLT2C2 LTR ERVL -6 458 1 263 208 179 1 chr5 9241937 9242169 -190387981 - Charlie7 DNA MER1_type -8 2604 2320 440 219 17 0 chr5 9242184 9242303 -190387847 + L1M4c LINE L1 2296 2416 -3968 1003 249 179 18 chr5 9242304 9242801 -190387349 - Charlie7 DNA MER1_type -298 2314 1738 485 247 0 0 chr5 9242800 9242893 -190387257 - MLT1D LTR MaLR -411 94 2 * 5377 68 36 21 chr5 9245270 9246025 -190384125 + MER4E LTR ERV1 1 766 0 2658 58 0 0 chr5 9246631 9246940 -190383210 - AluY SINE Alu -2 309 1 2264 64 0 0 chr5 9247104 9247370 -190382780 - AluY SINE Alu -45 266 1 1781 125 133 77 chr5 9248916 9249308 -190380842 + MLT2D LTR ERVL 1 414 0 493 219 144 31 chr5 9250320 9250480 -190379670 - MER112 DNA MER1_type -2 258 81 2180 135 37 6 chr5 9251392 9251719 -190378431 - MER1B DNA MER1_type -1 338 2 301 252 42 84 chr5 9252672 9252815 -190377335 - MIR3 SINE MIR -51 157 21 547 213 0 0 chr5 9253207 9253301 -190376849 + MER58B DNA MER1_type 3 96 -245 992 151 0 41 chr5 9253302 9253474 -190376676 - AluJb SINE Alu -19 293 129 910 220 33 19 chr5 9253491 9253705 -190376445 + MER58B DNA MER1_type 125 341 0 1567 164 3 66 chr5 9253923 9254071 -190376079 + AluJb SINE Alu 1 124 -188 297 0 0 0 chr5 9254071 9254104 -190376046 + (TA)n Simple_repeat Simple_repeat 2 34 0 1567 164 3 66 chr5 9254104 9254282 -190375868 + AluJb SINE Alu 124 312 0 370 289 16 0 chr5 9254327 9254455 -190375695 - MER20 DNA MER1_type -4 215 86 2567 61 0 10 chr5 9255693 9256005 -190374145 + AluY SINE Alu 1 309 -2 2336 96 0 3 chr5 9257806 9258120 -190372030 + AluSq SINE Alu 1 313 0 643 251 86 67 chr5 9258216 9258647 -190371503 + MLT1H LTR MaLR 107 545 -4 202 143 41 0 chr5 9259333 9259382 -190370768 + (CATATA)n Simple_repeat Simple_repeat 2 52 0 238 302 191 0 chr5 9259531 9259657 -190370493 - MIR3 SINE MIR -23 185 36 226 255 53 75 chr5 9259755 9259849 -190370301 - L2 LINE L2 -4 3268 3177 239 333 139 19 chr5 9260095 9260563 -190369587 - L2 LINE L2 -427 2887 2364 401 246 215 26 chr5 9260605 9260800 -190369350 + MLT1J LTR MaLR 1 232 -279 668 207 8 139 chr5 9260940 9261191 -190368959 + MER20 DNA MER1_type 2 219 0 458 337 15 10 chr5 9262801 9263006 -190367144 + MIR SINE MIR 51 256 -6 587 294 95 5 chr5 9264256 9264467 -190365683 - MLT1I LTR MaLR -81 328 99 275 254 30 0 chr5 9268223 9268290 -190361860 - LTR16C LTR ERVL -9 482 414 2311 114 0 3 chr5 9269067 9269375 -190360775 - AluSx SINE Alu -5 307 1 225 154 0 0 chr5 9270188 9270227 -190359923 + (TGAA)n Simple_repeat Simple_repeat 1 39 0 22 0 0 0 chr5 9271291 9271313 -190358837 + AT_rich Low_complexity Low_complexity 1 22 0 2306 111 141 5 chr5 9272542 9272919 -190357231 - MSTA LTR MaLR 0 428 1 300 70 0 0 chr5 9323937 9323980 -190306170 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2390 45 10 3 chr5 9323988 9324280 -190305870 - AluY SINE Alu -17 294 1 1501 217 15 6 chr5 9324289 9324616 -190305534 - L1MB3 LINE L1 -1 6182 5853 241 354 104 11 chr5 9325581 9325841 -190304309 + L3b LINE CR1 1103 1386 -197 231 152 0 0 chr5 9326820 9326866 -190303284 + GA-rich Low_complexity Low_complexity 1 46 0 2348 96 0 3 chr5 9328637 9328939 -190301211 + AluY SINE Alu 1 301 -10 325 283 108 35 chr5 9329959 9330507 -190299643 + L1ME4a LINE L1 5530 6117 -4 358 301 10 10 chr5 9330571 9330674 -190299476 - MIR SINE MIR -50 212 110 641 167 118 73 chr5 9331690 9331894 -190298256 - MER5C DNA MER1_type -1 323 111 264 307 88 29 chr5 9332971 9333108 -190297042 - MIR SINE MIR -92 170 26 1076 201 5 33 chr5 9334264 9334478 -190295672 - MER20 DNA MER1_type -6 213 6 23 0 0 0 chr5 9334911 9334934 -190295216 + AT_rich Low_complexity Low_complexity 1 23 0 1519 86 16 67 chr5 9335744 9335892 -190294258 - L1MA1 LINE L1 -7 6295 6141 1903 159 10 3 chr5 9335892 9336064 -190294086 - AluSx SINE Alu -9 303 134 321 26 0 0 chr5 9336064 9336102 -190294048 + (TG)n Simple_repeat Simple_repeat 1 38 0 276 100 0 0 chr5 9336105 9336145 -190294005 + (CATATA)n Simple_repeat Simple_repeat 6 45 0 1903 159 10 3 chr5 9336145 9336269 -190293881 - AluSx SINE Alu -179 133 1 1519 86 16 67 chr5 9336269 9336286 -190293864 - L1MA1 LINE L1 -161 6141 6125 2114 127 0 0 chr5 9336286 9336577 -190293573 - AluSx SINE Alu -19 293 3 1519 86 16 67 chr5 9336577 9336665 -190293485 - L1MA1 LINE L1 -177 6125 6054 207 0 0 0 chr5 9337082 9337105 -190293045 + (A)n Simple_repeat Simple_repeat 1 23 0 2163 198 58 81 chr5 9337436 9338003 -190292147 + MLT2B3 LTR ERVL 1 554 0 308 169 68 0 chr5 9338238 9338297 -190291853 + L2 LINE L2 3250 3312 -1 290 87 22 0 chr5 9341999 9342045 -190288105 + (GA)n Simple_repeat Simple_repeat 1 47 0 1844 240 33 7 chr5 9342100 9342550 -190287600 + MLT1C LTR MaLR 6 467 0 394 323 150 18 chr5 9344080 9344306 -190285844 - MIR SINE MIR 0 262 7 498 267 43 74 chr5 9348079 9348337 -190281813 - MLT1C LTR MaLR -213 254 5 376 118 40 0 chr5 9348458 9348534 -190281616 + (TAGA)n Simple_repeat Simple_repeat 3 81 0 2030 128 0 13 chr5 9348989 9349302 -190280848 - AluSx SINE Alu -3 309 1 953 201 106 82 chr5 9351437 9352071 -190278079 - MER4C LTR ERV1 0 465 10 2122 86 7 23 chr5 9352912 9353216 -190276934 + AluSq SINE Alu 1 299 -14 245 382 45 6 chr5 9353516 9353673 -190276477 + MIR SINE MIR 20 182 -80 1850 142 0 13 chr5 9353972 9354274 -190275876 + AluSg SINE Alu 1 298 -12 208 271 0 0 chr5 9356023 9356071 -190274079 + MIR SINE MIR 194 241 -21 1055 186 29 5 chr5 9356518 9356869 -190273281 - Tigger1 DNA MER2_type -5 2413 2 391 262 58 0 chr5 9358290 9358393 -190271757 + L2 LINE L2 3137 3245 -27 2276 61 40 0 chr5 9359396 9359692 -190270458 - AluY SINE Alu -3 308 1 298 366 6 19 chr5 9360514 9360675 -190269475 - MER5B DNA MER1_type -2 176 18 653 236 61 30 chr5 9360910 9361112 -190269038 + MIR SINE MIR 50 262 0 2159 105 0 0 chr5 9361207 9361501 -190268649 + AluSg SINE Alu 1 294 -16 1541 192 0 3 chr5 9364442 9364728 -190265422 + AluJo SINE Alu 1 285 -27 21 0 0 0 chr5 9364728 9364749 -190265401 + AT_rich Low_complexity Low_complexity 1 21 0 239 224 60 15 chr5 9364749 9364816 -190265334 - L1MC4 LINE L1 -1339 6703 6634 312 27 0 0 chr5 9364863 9364900 -190265250 + (GA)n Simple_repeat Simple_repeat 1 37 0 1686 154 3 20 chr5 9365859 9366151 -190263999 + AluJb SINE Alu 1 287 -25 180 0 0 0 chr5 9366283 9366303 -190263847 + (GA)n Simple_repeat Simple_repeat 1 20 0 905 189 13 44 chr5 9367177 9367234 -190262916 + MER96B DNA MER1_type? 190 247 -170 1237 231 12 82 chr5 9367234 9367636 -190262514 - MLT1A2 LTR MaLR 0 374 1 905 189 13 44 chr5 9367636 9367805 -190262345 + MER96B DNA MER1_type? 247 409 -8 238 293 102 32 chr5 9368724 9368881 -190261269 + MER5A DNA MER1_type 8 175 -14 501 274 9 50 chr5 9369316 9369496 -190260654 - MIR SINE MIR -51 157 5 242 322 132 0 chr5 9369816 9369937 -190260213 + MIR SINE MIR 112 248 -14 297 366 6 0 chr5 9371272 9371444 -190258706 + (TTGG)n Simple_repeat Simple_repeat 2 174 0 278 292 42 0 chr5 9371538 9371634 -190258516 + Charlie8 DNA MER1_type 184 283 -2134 2326 73 3 0 chr5 9372046 9372346 -190257804 + AluY SINE Alu 1 301 -10 30 69 0 0 chr5 9372375 9372433 -190257717 + AT_rich Low_complexity Low_complexity 1 58 0 597 246 18 53 chr5 9373389 9373451 -190256699 - MIR SINE MIR -48 214 151 1965 123 0 7 chr5 9373451 9373753 -190256397 + AluSx SINE Alu 1 300 -12 597 246 18 53 chr5 9373753 9373910 -190256240 - MIR SINE MIR -111 151 1 249 333 0 0 chr5 9374064 9374127 -190256023 + L2 LINE L2 3205 3267 -5 857 198 8 88 chr5 9375131 9375369 -190254781 + MER20 DNA MER1_type 1 219 0 449 331 43 0 chr5 9376014 9376153 -190253997 - L2 LINE L2 -6 3266 3122 2265 157 13 18 chr5 9376635 9377023 -190253127 - MLT1B LTR MaLR -2 388 3 316 280 99 49 chr5 9377027 9377270 -190252880 - LTR33 LTR ERVL -161 360 106 442 193 9 55 chr5 9378118 9378227 -190251923 - MER104 DNA Tc2 -76 104 1 1955 139 13 3 chr5 9378370 9378679 -190251471 + AluJb SINE Alu 1 312 0 1444 124 0 0 chr5 9379170 9379379 -190250771 - AluSg/x SINE Alu 0 312 104 542 125 125 0 chr5 9379401 9379489 -190250661 - AluSq/x SINE Alu -180 132 34 3425 92 11 0 chr5 9379695 9380143 -190250007 - MLT2A2 LTR ERVL 0 453 1 1943 145 0 3 chr5 9381036 9381340 -190248810 + AluJb SINE Alu 1 303 -9 228 330 34 0 chr5 9382367 9382455 -190247695 - L2 LINE L2 -42 3271 3181 261 163 0 0 chr5 9383527 9383576 -190246574 + (TG)n Simple_repeat Simple_repeat 1 49 0 304 221 85 79 chr5 9387319 9387502 -190242648 - L1MC/D LINE L1 -419 5745 5550 336 319 17 9 chr5 9389121 9389237 -190240913 + MIR SINE MIR 22 138 -124 679 189 16 74 chr5 9389920 9390110 -190240040 + MER5A DNA MER1_type 4 182 -7 205 330 20 60 chr5 9390118 9390218 -190239932 - MIR SINE MIR -59 149 54 1857 147 13 7 chr5 9390625 9390931 -190239219 + AluJo SINE Alu 1 308 -4 229 371 8 8 chr5 9391876 9392000 -190238150 - MIR SINE MIR -119 143 20 2274 83 52 3 chr5 9393323 9393613 -190236537 - AluSx SINE Alu -8 304 1 290 285 17 12 chr5 9394086 9394258 -190235892 + (CATATA)n Simple_repeat Simple_repeat 2 174 0 437 199 4 45 chr5 9394284 9394517 -190235633 + (CATA)n Simple_repeat Simple_repeat 1 242 -1179 6950 118 46 55 chr5 9394517 9395759 -190234391 + Tigger3b DNA MER2_type 1 1231 0 437 199 4 45 chr5 9395759 9395767 -190234383 + (CATA)n Simple_repeat Simple_repeat 242 1421 0 1254 153 38 0 chr5 9395797 9396006 -190234144 - Tigger1 DNA MER2_type 0 2418 2202 1023 153 0 6 chr5 9395995 9396152 -190233998 - Tigger1 DNA MER2_type -2261 157 2 * 2051 174 11 6 chr5 9396665 9397028 -190233122 - MLT1A1 LTR MaLR 0 365 1 1989 222 80 34 chr5 9397190 9397806 -190232344 - LTR48B LTR ERV1 0 644 1 196 151 19 19 chr5 9397901 9397954 -190232196 + (TA)n Simple_repeat Simple_repeat 2 54 0 2358 118 30 28 chr5 9399754 9400117 -190230033 - THE1B LTR MaLR 0 364 1 1821 183 113 26 chr5 9401488 9401791 -190228359 + MLT1C LTR MaLR 9 359 -108 6261 90 37 3 chr5 9401791 9402821 -190227329 + L1PA11 LINE L1 5112 6173 -1 1821 183 113 26 chr5 9402821 9402933 -190227217 + MLT1C LTR MaLR 359 460 -7 504 271 129 78 chr5 9403187 9403560 -190226590 + MLT1J2 LTR MaLR 1 392 -58 772 247 86 0 chr5 9403591 9403765 -190226385 + MER63A DNA MER1_type 18 206 -4 460 299 64 5 chr5 9405246 9405450 -190224700 - L2 LINE L2 0 3313 3098 1990 132 54 40 chr5 9405762 9406132 -190224018 - THE1C LTR MaLR 0 375 1 205 301 206 19 chr5 9406882 9407091 -190223059 - MIR SINE MIR 0 262 15 2154 164 3 6 chr5 9407147 9407500 -190222650 - MLT1A1 LTR MaLR -13 352 1 1500 163 16 16 chr5 9407587 9407839 -190222311 - AluSx SINE Alu -25 287 36 876 221 77 10 chr5 9408268 9408476 -190221674 - MER58A DNA MER1_type 0 224 3 1571 232 13 33 chr5 9409251 9409447 -190220703 - MLT1B LTR MaLR -1 389 203 2493 116 16 8 chr5 9409447 9409819 -190220331 + THE1C LTR MaLR 1 375 0 1571 232 13 33 chr5 9409819 9410019 -190220131 - MLT1B LTR MaLR -187 203 1 187 177 0 51 chr5 9411584 9411663 -190218487 + (CCCG)n Simple_repeat Simple_repeat 2 76 0 208 263 168 0 chr5 9412213 9412308 -190217842 - L2 LINE L2 -23 3290 3180 285 165 0 3 chr5 9412353 9412439 -190217711 - MER3 DNA MER1_type 0 2585 2472 352 236 0 0 chr5 9412443 9412515 -190217635 - MER3 DNA MER1_type -95 114 43 246 293 0 13 chr5 9412602 9412677 -190217473 + L1ME3A LINE L1 6054 6127 -43 2302 120 24 24 chr5 9413907 9414281 -190215869 + THE1C LTR MaLR 2 375 0 256 256 176 24 chr5 9414333 9414458 -190215692 - LTR16C LTR ERVL -32 459 316 1794 86 3 111 chr5 9415112 9415247 -190214903 - MLT2A2 LTR ERVL 0 453 370 2189 93 75 9 chr5 9415247 9415580 -190214570 - THE1A LTR MaLR 0 355 1 1794 86 3 111 chr5 9415580 9415759 -190214391 - MLT2A2 LTR ERVL -83 370 173 562 258 72 70 chr5 9415775 9416291 -190213859 + L1MC5 LINE L1 7308 7824 -137 618 207 133 0 chr5 9416340 9416475 -190213675 - FRAM SINE Alu -9 157 5 1205 246 111 33 chr5 9416740 9417163 -190212987 - LTR65 LTR ERV1 -47 622 167 183 114 0 0 chr5 9417575 9417610 -190212540 + (T)n Simple_repeat Simple_repeat 1 35 0 21 36 0 0 chr5 9418019 9418047 -190212103 + AT_rich Low_complexity Low_complexity 1 28 0 183 274 68 14 chr5 9419323 9419396 -190210754 - MIR3 SINE MIR -31 177 101 245 243 40 0 chr5 9419435 9419509 -190210641 - MIR SINE MIR -6 256 180 29 0 0 0 chr5 9420068 9420097 -190210053 + AT_rich Low_complexity Low_complexity 1 29 0 488 259 7 34 chr5 9420434 9420581 -190209569 + L2 LINE L2 3167 3309 -4 944 246 89 32 chr5 9421590 9421903 -190208247 + MER93a LTR ERV1 70 400 -2 28 61 0 0 chr5 9422108 9422157 -190207993 + AT_rich Low_complexity Low_complexity 1 49 0 22 35 0 0 chr5 9422231 9422260 -190207890 + AT_rich Low_complexity Low_complexity 1 29 0 946 132 111 16 chr5 9423096 9423286 -190206864 + MER3 DNA MER1_type 1 208 -1 446 313 55 11 chr5 9423332 9423514 -190206636 - MIR SINE MIR -57 205 16 1438 170 4 0 chr5 9424209 9424444 -190205706 + MER46A DNA MER2_type 1 236 0 1030 144 76 79 chr5 9424548 9424663 -190205487 + L1MA8 LINE L1 6026 6140 -151 2259 109 3 3 chr5 9424663 9424975 -190205175 - AluSq SINE Alu 0 313 2 1030 144 76 79 chr5 9424975 9425140 -190205010 + L1MA8 LINE L1 6140 6285 -6 30 45 0 0 chr5 9425169 9425213 -190204937 + AT_rich Low_complexity Low_complexity 1 44 0 531 317 93 21 chr5 9425376 9425996 -190204154 + L1MC4a LINE L1 5298 5575 -725 207 0 0 0 chr5 9429026 9429049 -190201101 + (A)n Simple_repeat Simple_repeat 1 23 0 407 221 99 23 chr5 9429186 9429317 -190200833 - MIR SINE MIR -104 158 18 187 305 34 0 chr5 9430715 9430774 -190199376 - L2 LINE L2 0 3272 3212 181 319 115 18 chr5 9431243 9431356 -190198794 - MIR SINE MIR -98 164 41 213 132 26 0 chr5 9434459 9434497 -190195653 + (TATATG)n Simple_repeat Simple_repeat 2 40 0 617 239 17 33 chr5 9434767 9434947 -190195203 - MER5B DNA MER1_type -1 177 1 198 0 0 0 chr5 9435414 9435436 -190194714 + (T)n Simple_repeat Simple_repeat 1 22 0 718 223 217 0 chr5 9435539 9435723 -190194427 - MER58A DNA MER1_type 0 224 1 637 297 29 21 chr5 9437459 9437698 -190192452 + MIR SINE MIR 16 256 -6 22 35 0 0 chr5 9438191 9438220 -190191930 + AT_rich Low_complexity Low_complexity 1 29 0 876 211 83 5 chr5 9439232 9439436 -190190714 + MER58A DNA MER1_type 2 221 -3 849 50 0 0 chr5 9440211 9440311 -190189839 + AluSg/x SINE Alu 206 305 -7 534 234 0 8 chr5 9440460 9440584 -190189566 - LTR16A LTR ERVL -53 397 275 1111 347 86 33 chr5 9440630 9441593 -190188557 - ERVL LTR ERVL -2565 3199 2186 723 285 96 17 chr5 9441587 9441996 -190188154 - ERVL LTR ERVL -2917 2079 1619 * 627 310 76 14 chr5 9442000 9442355 -190187795 - ERVL LTR ERVL -4041 955 579 277 304 111 0 chr5 9442724 9442859 -190187291 - ERVL LTR ERVL -4846 150 1 1058 241 101 3 chr5 9442859 9443145 -190187005 - LTR16A LTR ERVL 0 450 137 451 248 9 0 chr5 9443435 9443540 -190186610 - MER3 DNA MER1_type -6 203 98 303 319 30 0 chr5 9444267 9444433 -190185717 + (TTGTG)n Simple_repeat Simple_repeat 4 174 0 186 235 153 35 chr5 9444645 9444719 -190185431 - MIR SINE MIR -65 143 56 1694 153 48 30 chr5 9444719 9445014 -190185136 + AluJb SINE Alu 1 300 -12 984 237 128 22 chr5 9445113 9445425 -190184725 + MER2 DNA MER2_type 1 345 0 27 29 0 0 chr5 9447068 9447102 -190183048 + AT_rich Low_complexity Low_complexity 1 34 0 279 104 0 0 chr5 9448359 9448407 -190181743 + (TA)n Simple_repeat Simple_repeat 2 49 0 306 216 0 0 chr5 9448535 9448609 -190181541 + (TG)n Simple_repeat Simple_repeat 2 75 0 231 87 0 0 chr5 9448609 9448655 -190181495 + LTR66 LTR ERVL 394 439 -171 381 306 86 63 chr5 9448879 9449101 -190181049 - L1MC/D LINE L1 -2019 5789 5563 25 31 0 0 chr5 9449696 9449728 -190180422 + AT_rich Low_complexity Low_complexity 1 32 0 24 67 0 0 chr5 9451392 9451437 -190178713 + AT_rich Low_complexity Low_complexity 1 45 0 207 0 0 0 chr5 9452115 9452138 -190178012 + (T)n Simple_repeat Simple_repeat 1 23 0 189 333 152 0 chr5 9452322 9452421 -190177729 - L2 LINE L2 -4 3268 3155 2469 57 7 0 chr5 9452588 9452885 -190177265 + AluY SINE Alu 3 301 -10 183 184 0 0 chr5 9454918 9454956 -190175194 + CT-rich Low_complexity Low_complexity 1 38 0 683 283 107 54 chr5 9455329 9455721 -190174429 + L2 LINE L2 2900 3312 -1 28 0 0 0 chr5 9456765 9456793 -190173357 + AT_rich Low_complexity Low_complexity 1 28 0 324 309 49 29 chr5 9458782 9458986 -190171164 + MER112 DNA MER1_type 53 260 0 278 232 254 17 chr5 9459307 9459484 -190170666 - L2 LINE L2 -1162 2152 1934 314 340 41 46 chr5 9459631 9459700 -190170450 - L2 LINE L2 -5 3267 3199 2005 153 95 5 chr5 9459700 9460091 -190170059 - MSTB LTR MaLR 0 426 1 314 340 41 46 chr5 9460091 9460215 -190169935 - L2 LINE L2 -73 3199 3075 306 163 70 35 chr5 9460226 9460312 -190169838 + MIR SINE MIR 172 260 -2 21 0 0 0 chr5 9461983 9462004 -190168146 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 9462452 9462475 -190167675 + AT_rich Low_complexity Low_complexity 1 23 0 536 269 105 45 chr5 9463373 9463658 -190166492 - L2 LINE L2 -73 3240 2903 3231 136 73 25 chr5 9463658 9464261 -190165889 - MER41B LTR ERV1 -1 634 3 536 269 105 45 chr5 9464261 9464413 -190165737 - L2 LINE L2 -410 2903 2762 1543 193 84 11 chr5 9464431 9464810 -190165340 - MER50 LTR ERV1 0 734 328 1550 205 92 49 chr5 9464818 9465234 -190164916 - L1MD3 LINE L1 -173 7822 7425 412 194 0 0 chr5 9465234 9465301 -190164849 - MLT1F1 LTR MaLR -456 111 45 1550 205 92 49 chr5 9465301 9465524 -190164626 - L1MD3 LINE L1 -570 7425 6874 375 250 17 17 chr5 9465738 9465858 -190164292 - L1MC3 LINE L1 -927 6858 6739 * 1970 228 2 4 chr5 9465855 9466321 -190163829 - L1MC3 LINE L1 -1798 5987 5523 637 213 94 35 chr5 9466321 9466523 -190163627 + MER97c DNA MER1_type? 374 587 -503 21 0 0 0 chr5 9467688 9467709 -190162441 + AT_rich Low_complexity Low_complexity 1 21 0 1617 206 0 8 chr5 9467718 9468091 -190162059 - L1MA4 LINE L1 -29 6271 5902 823 209 0 0 chr5 9468089 9468280 -190161870 - L1 LINE L1 -3221 3107 2917 * 6955 194 30 9 chr5 9468325 9470454 -190159696 - L1 LINE L1 -4065 1263 5 333 235 43 17 chr5 9470626 9470741 -190159409 + MER97b DNA MER1_type? 936 1053 0 23 54 0 0 chr5 9470847 9470884 -190159266 + AT_rich Low_complexity Low_complexity 1 37 0 225 224 20 0 chr5 9471145 9471194 -190158956 + (TATATG)n Simple_repeat Simple_repeat 4 53 0 180 200 0 0 chr5 9471571 9471611 -190158539 + (CTA)n Simple_repeat Simple_repeat 3 42 0 2358 112 27 33 chr5 9472095 9472461 -190157689 - THE1B LTR MaLR 0 364 1 11591 92 14 2 chr5 9472461 9474022 -190156128 - THE1B-int LTR MaLR 0 1580 1 2243 148 28 14 chr5 9474022 9474381 -190155769 - THE1B LTR MaLR 0 364 1 264 30 0 0 chr5 9475831 9475864 -190154286 + (TCCA)n Simple_repeat Simple_repeat 1 33 0 272 339 74 83 chr5 9476039 9476473 -190153677 + L2 LINE L2 2842 3271 -1 248 302 129 72 chr5 9476533 9476851 -190153299 - L2 LINE L2 -6 3266 2931 2075 164 42 11 chr5 9477985 9478363 -190151787 - MLT1B LTR MaLR 0 390 1 2147 235 70 34 chr5 9478388 9479653 -190150497 - L1ME1 LINE L1 -5 6161 4858 729 200 8 0 chr5 9479671 9479796 -190150354 - Tigger2a DNA MER2_type -1 433 308 616 204 6 78 chr5 9479812 9479979 -190150171 - Tigger2a DNA MER2_type -279 155 1 6063 241 66 22 chr5 9479983 9480727 -190149423 - L1ME1 LINE L1 -1307 4839 4129 2570 71 0 0 chr5 9480727 9481036 -190149114 - AluY SINE Alu -2 309 1 6063 241 66 22 chr5 9481036 9482669 -190147481 - L1ME1 LINE L1 -2017 4129 2359 2630 169 55 3 chr5 9482784 9483440 -190146710 - L1MA4 LINE L1 -743 5403 4743 4404 140 12 65 chr5 9483440 9484356 -190145794 + L1MA4 LINE L1 5428 6294 -6 509 159 215 0 chr5 9485056 9485163 -190144987 - FLAM_A SINE Alu -3 130 1 385 274 76 32 chr5 9489046 9489203 -190140947 + MIR SINE MIR 86 249 -13 224 344 57 8 chr5 9489269 9489391 -190140759 + MIR SINE MIR 69 196 -66 21 36 0 0 chr5 9491906 9491934 -190138216 + AT_rich Low_complexity Low_complexity 1 28 0 4130 141 65 23 chr5 9492252 9493038 -190137112 + LTR1B LTR ERV1 1 819 -7 1763 164 3 9 chr5 9493151 9493475 -190136675 - L1MC/D LINE L1 -2034 5751 5430 236 224 0 26 chr5 9493787 9493819 -190136331 + T-rich Low_complexity Low_complexity 5 36 -42 1245 51 0 0 chr5 9493819 9493975 -190136175 - L1PA5 LINE L1 -1 6153 5998 236 224 0 26 chr5 9493975 9494018 -190136132 + T-rich Low_complexity Low_complexity 36 78 0 2181 122 81 57 chr5 9498005 9498240 -190131910 + MSTA LTR MaLR 1 252 -176 2284 68 0 4 chr5 9498240 9498521 -190131629 + AluY SINE Alu 28 307 -4 2181 122 81 57 chr5 9498521 9498703 -190131447 + MSTA LTR MaLR 252 428 0 252 122 0 0 chr5 9500622 9500663 -190129487 + (TTCC)n Simple_repeat Simple_repeat 3 43 0 203 244 0 110 chr5 9503213 9503295 -190126855 - L2 LINE L2 -63 3209 3137 21 0 0 0 chr5 9503457 9503478 -190126672 + AT_rich Low_complexity Low_complexity 1 21 0 2235 107 3 3 chr5 9505849 9506148 -190124002 - AluSq SINE Alu -14 299 1 323 288 75 27 chr5 9506808 9506954 -190123196 + L1ME1 LINE L1 50 202 -5917 2243 118 3 0 chr5 9507130 9507435 -190122715 - AluSx SINE Alu -6 306 1 1139 266 57 36 chr5 9507625 9508350 -190121800 + L1ME1 LINE L1 1122 1898 -4412 2664 249 61 17 chr5 9508351 9509634 -190120516 + L1ME1 LINE L1 4808 6144 -5 2064 109 0 18 chr5 9509658 9509966 -190120184 + AluSg SINE Alu 1 303 0 859 194 66 0 chr5 9510102 9510313 -190119837 - L1M3 LINE L1 -856 5478 5254 667 182 35 0 chr5 9510346 9510489 -190119661 + L1 LINE L1 5099 5246 -900 5354 101 14 9 chr5 9511445 9512250 -190117900 - L1PA13 LINE L1 -8 6155 5347 1179 252 72 31 chr5 9512407 9512851 -190117299 + MLT1C LTR MaLR 1 462 -5 1375 206 23 30 chr5 9514213 9514514 -190115636 + AluJb SINE Alu 1 299 -13 2576 34 0 3 chr5 9517159 9517456 -190112694 - AluY SINE Alu -15 296 1 679 175 7 0 chr5 9517743 9517880 -190112270 - L1P5 LINE L1 -450 5706 5569 532 196 0 0 chr5 9517880 9517977 -190112173 + L1PB4 LINE L1 6055 6156 0 276 30 0 0 chr5 9518372 9518405 -190111745 + (TG)n Simple_repeat Simple_repeat 1 33 0 243 125 0 0 chr5 9518407 9518447 -190111703 + (GA)n Simple_repeat Simple_repeat 2 41 0 321 26 0 0 chr5 9518940 9518978 -190111172 + (TG)n Simple_repeat Simple_repeat 2 39 0 2455 76 0 0 chr5 9519018 9519309 -190110841 + AluSg SINE Alu 1 291 -19 319 49 0 0 chr5 9519705 9519746 -190110404 - AluY SINE Alu -261 47 7 422 327 186 4 chr5 9519765 9520028 -190110122 - L1ME LINE L1 -299 5822 5512 346 298 116 0 chr5 9520609 9520790 -190109360 - MLT1G3 LTR MaLR -174 356 155 1734 159 12 72 chr5 9521276 9521678 -190108472 - MLT1B LTR MaLR 0 390 13 295 309 11 0 chr5 9522025 9522119 -190108031 - L1ME LINE L1 -2255 3891 3797 2163 98 9 0 chr5 9522132 9522617 -190107533 - MER41A LTR ERV1 -107 528 1 221 276 0 0 chr5 9524132 9524190 -190105960 + (TA)n Simple_repeat Simple_repeat 2 59 0 241 233 27 0 chr5 9524201 9524274 -190105876 - L1MC4 LINE L1 -1344 6698 6624 8905 99 25 6 chr5 9524941 9526198 -190103952 - HSMAR1 DNA Mariner -3 1284 4 221 83 28 0 chr5 9526699 9526735 -190103415 + (TAAA)n Simple_repeat Simple_repeat 2 38 0 1531 230 53 45 chr5 9527743 9528235 -190101915 + MLT1D LTR MaLR 1 496 -9 241 323 16 48 chr5 9531222 9531346 -190098804 + L2 LINE L2 3193 3312 -1 192 372 99 33 chr5 9531383 9531504 -190098646 + MIR3 SINE MIR 53 181 -27 454 144 0 44 chr5 9531865 9531955 -190098195 - AluS SINE Alu -1 308 223 301 282 127 0 chr5 9532170 9532280 -190097870 + MER94 DNA DNA 11 134 0 2182 184 49 2 chr5 9533011 9533418 -190096732 + MSTB LTR MaLR 1 426 0 11232 49 1 1 chr5 9533589 9535757 -190094393 - L1PA5 LINE L1 -4 6150 3983 216 364 64 12 chr5 9536322 9536495 -190093655 + MIR SINE MIR 21 202 -60 2102 205 100 4 chr5 9536523 9537031 -190093119 + MER89 LTR ERV1 1 557 -2 384 219 117 16 chr5 9539368 9539496 -190090654 - MLT1K LTR MaLR -30 558 418 211 383 47 0 chr5 9539592 9539699 -190090451 + MIR SINE MIR 131 242 -20 611 111 11 0 chr5 9539902 9539992 -190090158 - AluSc SINE Alu -3 306 216 2508 122 8 3 chr5 9540299 9540661 -190089489 - THE1B LTR MaLR 0 364 1 228 297 44 0 chr5 9540835 9540926 -190089224 + MLT1J LTR MaLR 73 167 -344 1035 156 19 0 chr5 9540987 9541147 -190089003 + U1 snRNA snRNA 3 165 0 238 314 58 23 chr5 9541194 9541366 -190088784 + MLT1J LTR MaLR 236 413 -98 264 233 0 0 chr5 9541574 9541647 -190088503 + (CA)n Simple_repeat Simple_repeat 2 74 0 829 123 77 0 chr5 9542660 9542790 -190087360 + AluSg/x SINE Alu 155 294 -16 285 248 133 0 chr5 9542963 9543076 -190087074 - LTR16A LTR ERVL 0 450 323 1230 186 125 18 chr5 9543451 9543562 -190086588 + AluJb SINE Alu 1 99 -213 216 0 0 0 chr5 9543562 9543586 -190086564 + (CTA)n Simple_repeat Simple_repeat 1 24 0 1230 186 125 18 chr5 9543586 9543753 -190086397 + AluJb SINE Alu 99 309 -3 42 37 0 37 chr5 9543789 9543871 -190086279 + AT_rich Low_complexity Low_complexity 1 79 0 295 341 142 24 chr5 9545139 9545349 -190084801 - L2 LINE L2 -1378 1936 1752 256 31 0 0 chr5 9545349 9545381 -190084769 + (TTTG)n Simple_repeat Simple_repeat 2 92 0 2074 82 25 11 chr5 9545381 9545661 -190084489 - AluSx SINE Alu -1 315 1 295 341 142 24 chr5 9545661 9546035 -190084115 - L2 LINE L2 -1561 1753 1282 315 132 0 0 chr5 9546330 9546383 -190083767 - MSTC LTR MaLR -12 416 364 669 171 66 13 chr5 9546417 9546586 -190083564 - MSTC LTR MaLR -224 204 1 834 272 119 48 chr5 9547071 9547837 -190082313 - L1M4 LINE L1 -990 5156 4277 1764 203 7 47 chr5 9547837 9548241 -190081909 + MLT1B LTR MaLR 1 388 -2 834 272 119 48 chr5 9548241 9548640 -190081510 - L1M4 LINE L1 -1869 4277 3908 622 297 97 56 chr5 9548675 9549158 -190080992 - L1MCa LINE L1 -4064 2151 1768 342 335 5 5 chr5 9549194 9549385 -190080765 - L1MCa LINE L1 -4688 1708 1518 465 297 82 39 chr5 9549409 9549665 -190080485 + L1M4c LINE L1 1213 1479 -4905 31 26 0 0 chr5 9549800 9549838 -190080312 + AT_rich Low_complexity Low_complexity 1 38 0 211 325 90 32 chr5 9550021 9550168 -190079982 + MIR SINE MIR 19 169 -63 2060 149 0 0 chr5 9550758 9550773 -190079377 - AluSx SINE Alu -3 309 295 257 0 30 0 chr5 9550773 9550806 -190079344 + (TTCC)n Simple_repeat Simple_repeat 3 36 0 2060 149 0 0 chr5 9550806 9551099 -190079051 - AluSx SINE Alu -16 296 1 383 268 96 19 chr5 9552806 9552963 -190077187 - MIR SINE MIR -46 216 48 268 337 22 17 chr5 9553241 9553402 -190076748 - MIR SINE MIR -60 148 9 1091 170 20 0 chr5 9553673 9553873 -190076277 - MLT1B LTR MaLR 0 390 187 357 321 30 0 chr5 9553873 9553952 -190076198 + GA-rich Low_complexity Low_complexity 2 88 -48 1784 171 26 20 chr5 9553952 9554257 -190075893 + AluJb SINE Alu 4 310 -2 357 321 30 0 chr5 9554257 9554308 -190075842 + GA-rich Low_complexity Low_complexity 88 136 0 671 174 81 19 chr5 9554355 9554516 -190075634 - MLT1B LTR MaLR -217 173 3 230 285 174 25 chr5 9557209 9557444 -190072706 + MLT1J2 LTR MaLR 53 322 -128 3417 151 16 71 chr5 9557537 9558268 -190071882 - LTR8 LTR ERV1 0 691 1 353 304 22 14 chr5 9558687 9558825 -190071325 + MIR SINE MIR 65 203 -59 223 331 72 22 chr5 9558958 9559097 -190071053 - L2 LINE L2 -192 3121 2976 277 169 84 28 chr5 9559252 9559323 -190070827 - MLT1B LTR MaLR -314 76 2 491 273 98 69 chr5 9559328 9559779 -190070371 - L2 LINE L2 -382 2932 2469 6914 153 39 6 chr5 9559781 9562034 -190068116 - L1MA8 LINE L1 -54 7656 5340 1708 166 15 207 chr5 9562034 9562763 -190067387 - MER21A LTR ERV1 -273 658 70 2961 192 40 38 chr5 9562931 9563146 -190067004 - L1MA8 LINE L1 -2264 5301 5088 1642 214 0 3 chr5 9563146 9563457 -190066693 - AluJb SINE Alu 0 310 1 2961 192 40 38 chr5 9563457 9564075 -190066075 - L1MA8 LINE L1 -2477 5088 4466 1090 244 174 16 chr5 9564071 9564808 -190065342 - L1MA8 LINE L1 -3792 3773 2919 * 1621 176 116 59 chr5 9564809 9565213 -190064937 + MSTC LTR MaLR 2 428 0 3514 247 102 109 chr5 9565215 9565645 -190064505 + MSTC-int LTR MaLR 2 434 -1301 1206 67 11 11 chr5 9565645 9565824 -190064326 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 704 134 0 0 chr5 9565826 9565923 -190064227 - AluSg/x SINE Alu -31 281 185 3514 247 102 109 chr5 9565923 9567140 -190063010 + MSTC-int LTR MaLR 435 1735 0 1687 184 44 49 chr5 9567140 9567547 -190062603 + MSTC LTR MaLR 1 405 -23 3144 229 285 22 chr5 9567551 9569764 -190060386 - L1M2 LINE L1 -4317 2790 1 862 185 42 21 chr5 9569767 9569956 -190060194 - MLT1D LTR MaLR -312 193 1 696 242 54 112 chr5 9570890 9571353 -190058797 + LTR40c LTR ERVL 1 436 -29 185 261 22 0 chr5 9571748 9571794 -190058356 - MIR SINE MIR -160 102 56 349 93 147 27 chr5 9571860 9571935 -190058215 + L1PB1 LINE L1 6067 6150 -1 2308 82 0 0 chr5 9572102 9572394 -190057756 - AluY SINE Alu -14 297 6 1500 209 16 33 chr5 9572964 9573073 -190057077 + MLT1A1 LTR MaLR 2 111 -254 2380 140 48 27 chr5 9573073 9573486 -190056664 - MSTB LTR MaLR 0 426 5 1500 209 16 33 chr5 9573486 9573744 -190056406 + MLT1A1 LTR MaLR 111 363 -2 207 255 20 0 chr5 9573799 9573850 -190056300 + GA-rich Low_complexity Low_complexity 3 54 0 183 323 10 42 chr5 9575451 9575547 -190054603 - MIR SINE MIR -71 191 99 188 247 108 11 chr5 9575771 9575864 -190054286 - MIR SINE MIR -86 122 21 331 151 41 0 chr5 9576346 9576419 -190053731 + (TATATG)n Simple_repeat Simple_repeat 2 77 0 230 250 0 15 chr5 9576419 9576487 -190053663 - L1MC4 LINE L1 -1339 6703 6637 1320 271 58 23 chr5 9576822 9577240 -190052910 - L1M4 LINE L1 -2668 3478 3023 2177 109 14 0 chr5 9577240 9577533 -190052617 - AluSx SINE Alu -15 297 1 1320 271 58 23 chr5 9577533 9577822 -190052328 - L1M4 LINE L1 -3123 3023 2746 37 23 0 0 chr5 9577987 9578031 -190052119 + AT_rich Low_complexity Low_complexity 1 44 0 2884 226 53 7 chr5 9578162 9579042 -190051108 - L1MCa LINE L1 -2190 4236 3316 761 175 0 0 chr5 9579105 9579225 -190050925 + FLAM_C SINE Alu 5 124 -19 2978 218 60 42 chr5 9579270 9580400 -190049750 + L1M2 LINE L1 2098 3405 -4161 6019 200 70 20 chr5 9580405 9580604 -190049546 - L1MCa LINE L1 -4763 1663 1475 2569 115 13 8 chr5 9580604 9580977 -190049173 + THE1C LTR MaLR 1 375 0 6019 200 70 20 chr5 9580977 9582315 -190047835 - L1MCa LINE L1 -4951 1475 49 797 253 64 9 chr5 9582358 9582777 -190047373 - L1MEc LINE L1 -2955 3260 2819 620 257 70 63 chr5 9582798 9583729 -190046421 - L1MEc LINE L1 -3446 2769 1871 25 31 0 0 chr5 9583734 9583766 -190046384 + AT_rich Low_complexity Low_complexity 1 32 0 1066 219 99 44 chr5 9583789 9584242 -190045908 + Charlie1b DNA MER1_type 40 517 -6 417 292 64 9 chr5 9584281 9584500 -190045650 - L1MEc LINE L1 -4581 1815 1585 1638 206 30 30 chr5 9585553 9585918 -190044232 - MLT1A1 LTR MaLR 0 365 1 2823 10 0 0 chr5 9587676 9587984 -190042166 - AluY SINE Alu -3 308 1 2349 58 0 7 chr5 9587986 9588279 -190041871 - AluY SINE Alu -20 291 1 29 0 0 0 chr5 9588738 9588767 -190041383 + AT_rich Low_complexity Low_complexity 1 29 0 588 330 36 28 chr5 9588859 9589217 -190040933 - MLT1I LTR MaLR -2 407 47 4386 236 54 30 chr5 9589449 9590389 -190039761 - L1MDa LINE L1 -2296 4244 3328 1704 179 0 48 chr5 9590389 9590525 -190039625 + AluJo SINE Alu 1 142 -170 2167 107 19 10 chr5 9590525 9590834 -190039316 + AluSp SINE Alu 1 312 -1 1704 179 0 48 chr5 9590834 9591010 -190039140 + AluJo SINE Alu 142 298 -14 4386 236 54 30 chr5 9591010 9591887 -190038263 - L1MDa LINE L1 -3212 3328 2385 * 4451 223 99 81 chr5 9591855 9593918 -190036232 - L1MDa LINE L1 -4440 2100 1 342 279 29 29 chr5 9594006 9594110 -190036040 + MER5B DNA MER1_type 12 115 -63 23 0 0 0 chr5 9594612 9594635 -190035515 + AT_rich Low_complexity Low_complexity 1 23 0 216 313 36 24 chr5 9595210 9595293 -190034857 + L2 LINE L2 2677 2760 -554 201 194 48 29 chr5 9596232 9596335 -190033815 + (TTATA)n Simple_repeat Simple_repeat 4 108 0 776 122 76 15 chr5 9597004 9597135 -190033015 + MER85 DNA T2_type 1 139 0 643 123 0 0 chr5 9597775 9597856 -190032294 + AluS SINE Alu 2 82 -231 2933 94 10 5 chr5 9597872 9598274 -190031876 - HERVK9 LTR ERVK -5512 404 1 3337 88 4 67 chr5 9598274 9598784 -190031366 - MER9 LTR ERVK 0 511 34 2615 83 0 11 chr5 9598790 9599139 -190031011 + THE1B-int LTR MaLR 1236 1580 0 2086 159 25 27 chr5 9599139 9599504 -190030646 + THE1B LTR MaLR 1 364 0 1238 194 92 9 chr5 9599505 9599830 -190030320 - L1MCa LINE L1 -4865 1561 1210 180 0 0 0 chr5 9599844 9599864 -190030286 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 3198 168 11 13 chr5 9599864 9600402 -190029748 - L1PA15 LINE L1 -11 6154 5616 6042 223 33 13 chr5 9600419 9601921 -190028229 - L1PA13 LINE L1 -2734 4063 2532 2409 233 2 2 chr5 9601923 9602386 -190027764 - L1PA13 LINE L1 -6324 463 1 4405 200 13 17 chr5 9602414 9603313 -190026837 - L1MCa LINE L1 -5229 1197 302 875 186 56 0 chr5 9603986 9604147 -190026003 - MLT1A1 LTR MaLR 0 365 196 3498 28 0 0 chr5 9604147 9604544 -190025606 - L1PA4 LINE L1 -296 5859 5463 7403 68 9 1 chr5 9604904 9606135 -190024015 + L1PA8 LINE L1 4930 6168 -4 870 160 143 111 chr5 9606339 9606583 -190023567 - MLT1B LTR MaLR 0 390 139 2256 133 44 33 chr5 9606600 9606960 -190023190 + THE1B LTR MaLR 1 364 0 4605 88 7 2 chr5 9606960 9607570 -190022580 + THE1B-int LTR MaLR 1 613 -967 186 103 0 0 chr5 9607579 9607608 -190022542 + (A)n Simple_repeat Simple_repeat 1 29 0 341 306 57 0 chr5 9607734 9607858 -190022292 - L3 LINE CR1 -124 1453 1323 866 206 119 0 chr5 9608283 9608477 -190021673 + MER58A DNA MER1_type 7 223 -1 1922 114 21 25 chr5 9608595 9608875 -190021275 + AluSx SINE Alu 25 303 -9 196 350 49 7 chr5 9608903 9609046 -190021104 - L3 LINE CR1 -209 1368 1220 21 0 0 0 chr5 9610023 9610044 -190020106 + AT_rich Low_complexity Low_complexity 1 21 0 899 209 25 6 chr5 9610451 9610783 -190019367 + FRAM SINE Alu 1 199 0 795 80 40 23 chr5 9610794 9610969 -190019181 + GA-rich Low_complexity Low_complexity 1 178 0 243 79 0 0 chr5 9610975 9611013 -190019137 + (GGAA)n Simple_repeat Simple_repeat 3 40 0 433 145 29 29 chr5 9611173 9611311 -190018839 + GA-rich Low_complexity Low_complexity 3 140 0 910 84 0 53 chr5 9611315 9611336 -190018814 + (GGAA)n Simple_repeat Simple_repeat 1 199 0 910 84 0 53 chr5 9611336 9611526 -190018624 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 210 307 64 45 chr5 9611574 9611776 -190018374 - L2 LINE L2 -1486 1828 1623 279 0 0 0 chr5 9612859 9612890 -190017260 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 351 368 78 59 chr5 9612907 9613331 -190016819 - L2 LINE L2 -13 3259 2828 242 246 35 18 chr5 9615923 9616037 -190014113 + (TA)n Simple_repeat Simple_repeat 2 117 0 21 36 0 0 chr5 9618532 9618560 -190011590 + AT_rich Low_complexity Low_complexity 1 28 0 345 288 96 0 chr5 9623000 9623125 -190007025 + MLT1F LTR MaLR 3 139 -403 2742 118 3 6 chr5 9624538 9624903 -190005247 - THE1B LTR MaLR 0 364 1 224 272 66 73 chr5 9625095 9625231 -190004919 + L2 LINE L2 2843 2977 -337 202 286 250 27 chr5 9625496 9625608 -190004542 + L2 LINE L2 3126 3262 -10 993 284 104 6 chr5 9625717 9626052 -190004098 - MLT1F LTR MaLR -174 368 1 409 254 46 56 chr5 9626079 9626276 -190003874 - MLT1F-int LTR MaLR -14 1357 1163 235 335 163 10 chr5 9626948 9627157 -190002993 + L3 LINE CR1 1241 1481 -96 364 275 53 23 chr5 9627171 9627302 -190002848 - L2 LINE L2 -4 3309 3175 206 129 61 38 chr5 9627358 9627490 -190002660 + (TA)n Simple_repeat Simple_repeat 2 136 0 4713 297 96 27 chr5 9627643 9628184 -190001966 - L2 LINE L2 -350 2964 2461 279 0 0 0 chr5 9628184 9628215 -190001935 + (TG)n Simple_repeat Simple_repeat 2 32 0 4713 297 96 27 chr5 9628215 9630055 -190000095 - L2 LINE L2 -853 2461 420 203 411 11 39 chr5 9630450 9630630 -189999520 + L3 LINE CR1 1369 1543 -34 1310 174 42 51 chr5 9631540 9631701 -189998449 - MER33 DNA MER1_type -2269 316 157 1706 56 0 0 chr5 9631701 9631928 -189998222 + AluY SINE Alu 86 312 0 1310 174 42 51 chr5 9631928 9632076 -189998074 - MER33 DNA MER1_type -2428 157 9 731 256 58 18 chr5 9632133 9632356 -189997794 - MIR SINE MIR 0 262 31 1718 57 13 44 chr5 9632421 9632650 -189997500 + AluY SINE Alu 79 300 -11 207 271 0 0 chr5 9633484 9633532 -189996618 + GA-rich Low_complexity Low_complexity 4 51 0 1779 162 18 30 chr5 9634135 9634469 -189995681 - THE1C LTR MaLR 0 375 46 225 191 0 0 chr5 9634471 9634518 -189995632 + L1P LINE L1 4326 4372 -1774 376 160 12 8 chr5 9634524 9634602 -189995548 - MSTA LTR MaLR -276 79 1 22 56 0 0 chr5 9634644 9634680 -189995470 + AT_rich Low_complexity Low_complexity 1 36 0 2081 110 3 7 chr5 9634957 9635247 -189994903 - AluSc SINE Alu -18 291 3 29 60 0 0 chr5 9635830 9635880 -189994270 + AT_rich Low_complexity Low_complexity 1 50 0 3097 216 49 10 chr5 9636093 9636824 -189993326 + L1 LINE L1 4194 4953 -1193 397 217 8 70 chr5 9636873 9637002 -189993148 + L2 LINE L2 3193 3313 0 744 194 106 17 chr5 9637176 9637413 -189992737 + MER58D DNA MER1_type 127 384 -2 434 221 69 8 chr5 9637423 9637554 -189992596 + L1M4 LINE L1 2955 3093 -3053 282 226 0 48 chr5 9637555 9637639 -189992511 + L1M4 LINE L1 3043 3122 -3024 22 0 0 0 chr5 9637795 9637817 -189992333 + AT_rich Low_complexity Low_complexity 1 22 0 3339 128 18 22 chr5 9637825 9638380 -189991770 - L1MA6 LINE L1 -6 6294 5742 250 310 62 9 chr5 9638691 9638804 -189991346 - MIR SINE MIR -1 261 143 196 109 22 22 chr5 9639353 9639399 -189990751 + (TA)n Simple_repeat Simple_repeat 2 47 0 382 331 78 9 chr5 9639401 9639732 -189990418 + L1ME3 LINE L1 5455 5825 -337 22 88 0 0 chr5 9639776 9639833 -189990317 + AT_rich Low_complexity Low_complexity 1 57 0 223 261 18 42 chr5 9640447 9640612 -189989538 + (TTG)n Simple_repeat Simple_repeat 3 163 0 254 257 16 44 chr5 9640830 9641013 -189989137 + (TTG)n Simple_repeat Simple_repeat 3 180 0 2385 86 0 16 chr5 9643623 9643937 -189986213 + AluY SINE Alu 1 309 -2 5051 167 16 6 chr5 9643980 9644836 -189985314 - MER49 LTR ERV1 -58 865 1 38529 34 20 4 chr5 9645272 9651295 -189978855 - L1PA3 LINE L1 0 6155 13 241 340 167 27 chr5 9652047 9652739 -189977411 - L2 LINE L2 -19 3253 2467 186 269 269 33 chr5 9653205 9653476 -189976674 - L2 LINE L2 -1215 2099 1765 2264 151 48 22 chr5 9654090 9654507 -189975643 - MSTA LTR MaLR 0 428 1 2666 190 40 2 chr5 9654515 9655016 -189975134 - MSTA-int LTR MaLR -8 1643 1124 977 155 0 7 chr5 9655117 9655272 -189974878 - MSTA-int LTR MaLR -505 1075 922 2476 18 0 0 chr5 9656179 9656452 -189973698 - AluYb8 SINE Alu -10 308 36 2371 89 3 0 chr5 9656585 9656889 -189973261 - AluSp SINE Alu -8 305 1 23 0 0 0 chr5 9659731 9659754 -189970396 + AT_rich Low_complexity Low_complexity 1 23 0 675 35 0 0 chr5 9659781 9659867 -189970283 + L1PA4 LINE L1 6067 6152 -3 2056 125 0 10 chr5 9660031 9660328 -189969822 - AluSg SINE Alu -16 294 1 346 223 11 43 chr5 9660716 9660810 -189969340 - MER8 DNA MER2_type -53 186 96 21 36 0 0 chr5 9661236 9661264 -189968886 + AT_rich Low_complexity Low_complexity 1 28 0 354 216 14 0 chr5 9661634 9661708 -189968442 + L1ME2 LINE L1 6075 6149 -15 999 213 42 42 chr5 9661728 9661967 -189968183 + MER8 DNA MER2_type 1 239 0 822 55 9 0 chr5 9662593 9662702 -189967448 - L1PA4 LINE L1 -3 6152 6043 599 253 78 60 chr5 9662714 9662820 -189967330 - L1M3a LINE L1 -4708 1688 1585 3815 115 21 2 chr5 9662820 9663394 -189966756 - L1PA15 LINE L1 -3 6162 5578 599 253 78 60 chr5 9663394 9663976 -189966174 - L1M3a LINE L1 -4811 1585 1011 2272 117 3 0 chr5 9664985 9665293 -189964857 - AluSg SINE Alu -1 309 1 1497 203 6 19 chr5 9665388 9665703 -189964447 - AluJo SINE Alu -1 311 1 433 260 86 88 chr5 9665791 9665882 -189964268 - L1M4 LINE L1 -1498 4648 4558 798 21 0 0 chr5 9665882 9665975 -189964175 - L1PA5 LINE L1 -6 6148 6056 433 260 86 88 chr5 9665975 9666267 -189963883 - L1M4 LINE L1 -1588 4558 4266 345 329 57 33 chr5 9666343 9666643 -189963507 - L1M4 LINE L1 -2922 3224 2893 24 53 0 0 chr5 9667288 9667326 -189962824 + AT_rich Low_complexity Low_complexity 1 38 0 1964 130 161 34 chr5 9667379 9667429 -189962721 - MSTA LTR MaLR 0 428 386 2150 106 21 58 chr5 9667429 9667805 -189962345 + THE1B LTR MaLR 3 364 0 1964 130 161 34 chr5 9667805 9668132 -189962018 - MSTA LTR MaLR -42 386 3 23 33 0 0 chr5 9668355 9668385 -189961765 + AT_rich Low_complexity Low_complexity 1 30 0 207 333 13 13 chr5 9669225 9669303 -189960847 + L2 LINE L2 3189 3266 -6 1215 194 22 86 chr5 9669365 9669689 -189960461 - MLT1B LTR MaLR 0 390 88 415 324 130 12 chr5 9670281 9670627 -189959523 - L1M4 LINE L1 -1621 4525 4139 189 107 0 0 chr5 9670649 9670677 -189959473 + (TATATG)n Simple_repeat Simple_repeat 6 33 0 436 273 10 11 chr5 9670725 9670900 -189959250 - L1M4 LINE L1 -2209 3937 3764 264 278 60 20 chr5 9672922 9673073 -189957077 - Charlie7 DNA MER1_type -22 2590 2434 1865 163 137 11 chr5 9674996 9675376 -189954774 + MSTA LTR MaLR 1 428 0 21 57 0 0 chr5 9676605 9676640 -189953510 + AT_rich Low_complexity Low_complexity 1 35 0 211 321 95 42 chr5 9677385 9677553 -189952597 - MIR SINE MIR -13 249 73 189 216 34 0 chr5 9677611 9677699 -189952451 + (TATATG)n Simple_repeat Simple_repeat 2 92 0 426 308 0 8 chr5 9677712 9677832 -189952318 + L2 LINE L2 1729 1847 -1467 697 231 36 32 chr5 9677849 9678070 -189952080 - L1M4 LINE L1 -1084 6481 6260 528 131 15 41 chr5 9678162 9678512 -189951638 + (TA)n Simple_repeat Simple_repeat 1 340 0 398 262 54 50 chr5 9678565 9678786 -189951364 - L1MA9 LINE L1 -74 6238 6017 544 204 91 11 chr5 9678797 9678983 -189951167 - L1M4 LINE L1 -1542 6023 5823 641 221 7 0 chr5 9679002 9679138 -189951012 + FRAM SINE Alu 38 174 -2 225 237 75 75 chr5 9679335 9679428 -189950722 - MIR SINE MIR -74 188 96 1766 179 18 25 chr5 9680607 9681003 -189949147 + L1 LINE L1 3608 4000 -2146 1657 288 53 21 chr5 9681038 9681575 -189948575 - L1M4 LINE L1 -4704 2861 2286 225 65 0 0 chr5 9681575 9681606 -189948544 + (TTA)n Simple_repeat Simple_repeat 2 32 0 1657 288 53 21 chr5 9681606 9681895 -189948255 - L1M4 LINE L1 -5279 2286 2008 1793 265 52 42 chr5 9681966 9682663 -189947487 - L1M4 LINE L1 -6320 1169 466 203 337 63 11 chr5 9682962 9683057 -189947093 + MIR SINE MIR 163 262 0 2049 124 7 0 chr5 9683675 9683965 -189946185 + AluSx SINE Alu 1 292 -20 4321 119 17 22 chr5 9685664 9685894 -189944256 + L1MA2 LINE L1 5594 5824 -480 2108 114 7 13 chr5 9685894 9686202 -189943948 + AluSq SINE Alu 1 306 -7 4321 119 17 22 chr5 9686202 9686686 -189943464 + L1MA2 LINE L1 5824 6304 0 1444 105 81 0 chr5 9686718 9686966 -189943184 + L1MA1 LINE L1 6035 6302 0 424 95 24 0 chr5 9687200 9687284 -189942866 + (TA)n Simple_repeat Simple_repeat 1 86 0 2937 95 24 7 chr5 9687286 9687801 -189942349 - L1P5 LINE L1 -451 5700 5175 * 7963 220 21 19 chr5 9687794 9689916 -189940234 - L1 LINE L1 -1007 5139 3014 27 29 0 0 chr5 9691017 9691051 -189939099 + AT_rich Low_complexity Low_complexity 1 34 0 201 259 17 0 chr5 9692183 9692241 -189937909 + (TGAA)n Simple_repeat Simple_repeat 3 61 0 1193 232 26 53 chr5 9692768 9693108 -189937042 + MLT2C1 LTR ERVL 2 332 -65 501 89 40 0 chr5 9693129 9693230 -189936920 + (TAGA)n Simple_repeat Simple_repeat 2 106 0 202 136 17 34 chr5 9693271 9693330 -189936820 + (TAGA)n Simple_repeat Simple_repeat 1 58 0 1249 253 180 17 chr5 9693348 9693814 -189936336 - MLT1E LTR MaLR -51 542 1 23 0 0 0 chr5 9694315 9694338 -189935812 + AT_rich Low_complexity Low_complexity 1 23 0 224 211 34 41 chr5 9694378 9694525 -189935625 + (TTATA)n Simple_repeat Simple_repeat 3 148 0 470 196 130 0 chr5 9695986 9696124 -189934026 + L1MC3 LINE L1 6911 7066 -719 252 250 11 57 chr5 9696154 9696242 -189933908 + MLT1F1 LTR MaLR 25 108 -459 2310 189 83 12 chr5 9696246 9696824 -189933326 + L1MC2 LINE L1 6137 7747 0 2473 55 7 0 chr5 9698164 9698472 -189931678 + AluY SINE Alu 1 310 -1 1755 127 36 62 chr5 9699961 9700346 -189929804 - THE1C LTR MaLR 0 375 1 343 347 48 42 chr5 9701157 9701468 -189928682 - L1M4 LINE L1 -1035 5111 4799 524 28 0 28 chr5 9701504 9701575 -189928575 + (TTTC)n Simple_repeat Simple_repeat 4 72 0 1781 191 7 0 chr5 9701578 9701882 -189928268 - AluJb SINE Alu -6 306 1 333 318 86 18 chr5 9702141 9702421 -189927729 - L1M4 LINE L1 -1605 4541 4243 3050 178 27 25 chr5 9703609 9703770 -189926380 - MER50 LTR ERV1 -8 726 567 2169 108 0 0 chr5 9703770 9704068 -189926082 + AluSc SINE Alu 1 298 0 3050 178 27 25 chr5 9704068 9704545 -189925605 - MER50 LTR ERV1 -167 567 86 641 199 42 30 chr5 9704539 9704705 -189925445 - MER50 LTR ERV1 -566 168 1 * 2096 160 22 75 chr5 9706801 9706886 -189923264 + MLT1C LTR MaLR 1 89 -378 2224 99 6 13 chr5 9706886 9707200 -189922950 - AluSp SINE Alu -1 312 1 2096 160 22 75 chr5 9707200 9707607 -189922543 + MLT1C LTR MaLR 89 467 0 21 0 0 0 chr5 9708081 9708102 -189922048 + AT_rich Low_complexity Low_complexity 1 21 0 726 216 13 65 chr5 9708518 9708615 -189921535 + L1MB8 LINE L1 5951 6051 -127 1248 206 68 84 chr5 9708615 9709126 -189921024 + MLT1D LTR MaLR 1 503 -2 726 216 13 65 chr5 9709126 9709259 -189920891 + L1MB8 LINE L1 6051 6169 -9 21 0 0 0 chr5 9709288 9709309 -189920841 + AT_rich Low_complexity Low_complexity 1 21 0 318 295 129 14 chr5 9709546 9709617 -189920533 + L1ME1 LINE L1 5257 5318 -924 1983 89 19 4 chr5 9709617 9709888 -189920262 + AluSq SINE Alu 39 313 0 318 295 129 14 chr5 9709888 9709955 -189920195 + L1ME1 LINE L1 5318 5411 -831 362 268 36 0 chr5 9709955 9710067 -189920083 + L1ME1 LINE L1 6039 6154 -12 545 273 51 16 chr5 9710108 9710361 -189919789 + L1MC5 LINE L1 6978 7239 -722 1828 144 33 0 chr5 9710880 9711176 -189918974 - AluSc SINE Alu 0 305 1 3130 164 25 3 chr5 9711657 9712249 -189917901 + L1MA6 LINE L1 5696 6300 0 1973 41 0 4 chr5 9714195 9714497 -189915653 + L1PA4 LINE L1 5895 6155 0 380 288 50 31 chr5 9714850 9715010 -189915140 - MIR SINE MIR -70 192 30 1398 171 14 27 chr5 9715348 9715640 -189914510 + MLT2C2 LTR ERVL 2 289 -175 1274 79 23 0 chr5 9715671 9715848 -189914302 + THE1C LTR MaLR 1 181 -194 721 219 92 15 chr5 9715907 9716103 -189914047 + L1MC2 LINE L1 6109 6319 -25 703 177 65 16 chr5 9716321 9716507 -189913643 + MER58 DNA MER1_type 2 196 -2224 428 217 11 0 chr5 9716510 9716602 -189913548 + MER58 DNA MER1_type 2325 2417 -3 * 905 343 43 16 chr5 9716602 9717151 -189912999 + Zaphod DNA AcHobo 48 611 -3420 234 281 11 0 chr5 9717396 9717485 -189912665 + L1P2 LINE L1 5710 5799 -355 2423 51 0 10 chr5 9718963 9719257 -189910893 + AluY SINE Alu 13 303 -8 35604 36 25 1 chr5 9720092 9725620 -189904530 + L1PA3 LINE L1 1 6176 0 4786 244 100 18 chr5 9725675 9727679 -189902471 - L1PA13 LINE L1 -4003 2794 617 395 156 0 0 chr5 9727686 9727750 -189902400 - L1PA13 LINE L1 -6723 64 1 1249 240 72 33 chr5 9727759 9728340 -189901810 - L1M4 LINE L1 -749 5397 4787 2057 154 0 6 chr5 9728340 9728652 -189901498 - AluSx SINE Alu -2 310 1 1249 240 72 33 chr5 9728652 9728711 -189901439 - L1M4 LINE L1 -1359 4787 4732 1523 210 0 52 chr5 9729109 9729418 -189900732 - AluJo SINE Alu -17 295 3 9313 104 20 7 chr5 9729689 9730233 -189899917 + L1PA7 LINE L1 3897 4433 -1713 290 45 23 0 chr5 9730233 9730277 -189899873 + (CAAA)n Simple_repeat Simple_repeat 2 46 0 9313 104 20 7 chr5 9730277 9731216 -189898934 + L1PA7 LINE L1 4433 5399 -747 947 114 0 0 chr5 9731216 9731339 -189898811 + AluSg SINE Alu 1 123 -187 624 110 0 0 chr5 9731359 9731450 -189898700 + L1PA7 LINE L1 5386 5476 -678 5319 76 4 3 chr5 9731481 9731505 -189898645 + L1PA7 LINE L1 5438 5460 -694 195 69 0 0 chr5 9731505 9731534 -189898616 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 5319 76 4 3 chr5 9731534 9732220 -189897930 + L1PA7 LINE L1 5460 6149 -5 30 0 0 0 chr5 9732220 9732250 -189897900 + AT_rich Low_complexity Low_complexity 1 30 0 699 244 114 0 chr5 9732561 9732762 -189897388 + MER58A DNA MER1_type 1 224 0 25 65 0 0 chr5 9732980 9733026 -189897124 + AT_rich Low_complexity Low_complexity 1 46 0 378 281 79 31 chr5 9733234 9733462 -189896688 + L1M4 LINE L1 4528 4766 -1380 656 250 83 10 chr5 9733480 9733684 -189896466 + MER20 DNA MER1_type 1 219 0 23 33 0 0 chr5 9734125 9734155 -189895995 + AT_rich Low_complexity Low_complexity 1 30 0 4152 151 17 6 chr5 9735181 9735884 -189894266 + MER50 LTR ERV1 1 711 -23 225 270 150 10 chr5 9737091 9737191 -189892959 - MER5A DNA MER1_type -73 116 3 2336 104 0 0 chr5 9737720 9738018 -189892132 + AluSg SINE Alu 3 300 -10 1091 197 140 9 chr5 9738373 9738688 -189891462 + MLT1A1 LTR MaLR 10 365 0 188 81 48 65 chr5 9739978 9740040 -189890110 + (TCTCTG)n Simple_repeat Simple_repeat 6 66 0 211 315 62 23 chr5 9740092 9740222 -189889928 - MIR SINE MIR -71 191 57 227 114 23 0 chr5 9740293 9740337 -189889813 + (TA)n Simple_repeat Simple_repeat 2 46 0 203 407 68 0 chr5 9740738 9740856 -189889294 - L2 LINE L2 0 3272 3147 338 233 14 0 chr5 9741023 9741096 -189889054 - MIR SINE MIR -76 186 113 596 332 42 14 chr5 9741103 9741317 -189888833 + MIR SINE MIR 5 224 -38 708 250 96 33 chr5 9741331 9741717 -189888433 + MLT1C LTR MaLR 2 464 -3 591 282 88 12 chr5 9742853 9743508 -189886642 + L1MEc LINE L1 1702 2474 -3922 518 319 65 4 chr5 9743747 9743976 -189886174 - HAL1 LINE L1 -1908 599 357 539 192 33 0 chr5 9744008 9744128 -189886022 - MLT2E LTR ERVL -1 627 504 2315 209 31 45 chr5 9744248 9744869 -189885281 + MER90 LTR ERV1 3 614 0 512 214 71 0 chr5 9744970 9745110 -189885040 + L1MEc LINE L1 1941 2090 -4306 303 307 45 25 chr5 9745370 9745572 -189884578 - HAL1 LINE L1 -2275 232 27 317 227 152 8 chr5 9745972 9746104 -189884046 - MER58C DNA MER1_type -11 204 54 42 57 0 0 chr5 9746717 9746787 -189883363 + AT_rich Low_complexity Low_complexity 1 70 0 32 0 0 0 chr5 9748105 9748137 -189882013 + AT_rich Low_complexity Low_complexity 1 32 0 388 193 18 0 chr5 9748886 9748995 -189881155 + (TA)n Simple_repeat Simple_repeat 1 111 0 316 277 69 15 chr5 9749000 9749130 -189881020 + MER106B DNA MER1_type 923 1059 0 23 86 0 0 chr5 9749433 9749491 -189880659 + AT_rich Low_complexity Low_complexity 1 58 0 310 385 40 6 chr5 9749562 9749736 -189880414 - MIR SINE MIR -71 191 12 1783 119 15 4 chr5 9749768 9750029 -189880121 + AluSx SINE Alu 39 302 -10 203 417 45 15 chr5 9752034 9752166 -189877984 - MIR3 SINE MIR -71 137 2 2790 140 63 2 chr5 9753779 9754223 -189875927 - LOR1a LTR ERV1 -8 489 19 387 297 59 50 chr5 9754364 9754584 -189875566 - MIR3 SINE MIR -26 236 14 922 205 16 11 chr5 9754629 9754819 -189875331 + MLT2D LTR ERVL 6 196 -218 411 272 10 0 chr5 9754843 9754946 -189875204 + MLT2D LTR ERVL 377 480 -40 230 211 126 32 chr5 9754958 9755053 -189875097 - LTR66 LTR ERVL -171 439 336 249 282 45 18 chr5 9755200 9755310 -189874840 + L1M4 LINE L1 3656 3768 -2378 24 0 0 0 chr5 9755351 9755375 -189874775 + AT_rich Low_complexity Low_complexity 1 24 0 2053 138 164 11 chr5 9755484 9755855 -189874295 - MSTA LTR MaLR 0 428 1 643 305 181 25 chr5 9755904 9756495 -189873655 + L1M4 LINE L1 3606 4288 -1858 21 0 0 0 chr5 9756545 9756566 -189873584 + AT_rich Low_complexity Low_complexity 1 21 0 2274 103 0 22 chr5 9757856 9758167 -189871983 + AluSq SINE Alu 1 304 -9 2223 96 7 0 chr5 9758168 9758470 -189871680 + L1PA14 LINE L1 5856 6159 -2 247 366 0 0 chr5 9758861 9758962 -189871188 + L2 LINE L2 3208 3308 -5 415 325 33 4 chr5 9760036 9760222 -189869928 - MLT1H LTR MaLR -15 534 347 406 313 27 0 chr5 9760848 9760995 -189869155 - MLT1J2 LTR MaLR -195 255 105 582 277 15 42 chr5 9761008 9761268 -189868882 + L1ME3A LINE L1 5917 6169 -1 1119 167 8 41 chr5 9761286 9761455 -189868695 + L1ME LINE L1 5192 5352 -814 1340 193 77 11 chr5 9761455 9761729 -189868421 + AluJb SINE Alu 1 292 -20 1119 167 8 41 chr5 9761729 9761844 -189868306 + L1ME LINE L1 5352 5469 -697 24 32 0 0 chr5 9762764 9762795 -189867355 + AT_rich Low_complexity Low_complexity 1 31 0 1982 141 63 30 chr5 9764306 9764669 -189865481 - THE1C LTR MaLR 0 375 1 1622 178 57 48 chr5 9765098 9765120 -189865030 + MLT1A2 LTR MaLR 1 21 -353 2659 136 30 30 chr5 9765120 9765547 -189864603 + MSTA LTR MaLR 1 427 -1 1622 178 57 48 chr5 9765547 9765614 -189864536 + MLT1A2 LTR MaLR 21 86 -288 1498 196 94 24 chr5 9765614 9765955 -189864195 - MLT1A1 LTR MaLR 0 365 1 1622 178 57 48 chr5 9765955 9766235 -189863915 + MLT1A2 LTR MaLR 86 374 0 1450 170 0 8 chr5 9767458 9767705 -189862445 - L1MA10 LINE L1 -2 6332 6088 1042 156 50 6 chr5 9767706 9767885 -189862265 + MSTA LTR MaLR 1 187 -241 843 83 0 0 chr5 9767894 9768003 -189862147 + MSTA LTR MaLR 320 428 0 2545 200 32 6 chr5 9768022 9768521 -189861629 - L1MB1 LINE L1 -119 6070 5559 329 182 47 12 chr5 9769271 9769441 -189860709 + (TG)n Simple_repeat Simple_repeat 1 176 0 556 91 27 59 chr5 9769477 9769663 -189860487 + (TG)n Simple_repeat Simple_repeat 1 180 0 281 184 29 29 chr5 9769774 9769948 -189860202 + (TG)n Simple_repeat Simple_repeat 1 174 0 482 155 39 13 chr5 9769967 9770203 -189859947 + (TG)n Simple_repeat Simple_repeat 1 242 0 768 0 0 0 chr5 9771002 9771089 -189859061 - L1HS LINE L1 -2 6153 6067 2374 158 27 54 chr5 9773064 9773365 -189856785 - MLT1C LTR MaLR 0 467 182 1565 189 10 30 chr5 9773365 9773667 -189856483 - AluJo SINE Alu -16 296 1 2374 158 27 54 chr5 9773667 9773845 -189856305 - MLT1C LTR MaLR -285 182 1 23 33 0 0 chr5 9775565 9775595 -189854555 + AT_rich Low_complexity Low_complexity 1 30 0 4185 134 46 65 chr5 9776002 9776802 -189853348 + LTR1 LTR ERV1 1 785 0 425 329 22 36 chr5 9776977 9777202 -189852948 + MIR SINE MIR 29 250 -12 1522 148 19 11 chr5 9777406 9777676 -189852474 + L1MA8 LINE L1 6013 6284 -7 2548 84 0 0 chr5 9777730 9778041 -189852109 - AluSx SINE Alu -1 311 1 2455 170 34 5 chr5 9778692 9779139 -189851011 + L1MA4 LINE L1 5426 5885 -415 * 30560 115 7 22 chr5 9779137 9785294 -189844856 + L1PA7 LINE L1 316 6469 0 233 242 81 0 chr5 9785588 9785650 -189844500 + MIR SINE MIR 90 156 -106 1622 183 17 56 chr5 9785727 9786083 -189844067 + MLT1B LTR MaLR 1 342 -48 2068 115 26 50 chr5 9786083 9786583 -189843567 - MER51B LTR ERV1 0 377 1 379 135 0 0 chr5 9786583 9786635 -189843515 + MLT1B LTR MaLR 339 390 0 21 0 0 0 chr5 9787177 9787198 -189842952 + AT_rich Low_complexity Low_complexity 1 21 0 199 250 95 24 chr5 9788292 9788376 -189841774 - L3 LINE CR1 -881 696 607 451 300 137 23 chr5 9788627 9788934 -189841216 - LTR16A LTR ERVL -5 445 104 28 29 0 0 chr5 9789471 9789506 -189840644 + AT_rich Low_complexity Low_complexity 1 35 0 22 70 0 0 chr5 9789652 9789695 -189840455 + AT_rich Low_complexity Low_complexity 1 43 0 200 315 12 30 chr5 9790391 9790526 -189839624 - MIR3 SINE MIR -53 155 23 3077 164 25 2 chr5 9792755 9793272 -189836878 - Tigger1 DNA MER2_type 0 2418 1890 1041 191 56 72 chr5 9793296 9793600 -189836550 - PABL_B LTR ERV1 -23 644 346 375 327 28 60 chr5 9793604 9793821 -189836329 - PABL_B LTR ERV1 -457 210 1 5940 133 7 14 chr5 9793821 9794742 -189835408 - Tigger1 DNA MER2_type -534 1884 971 2484 84 0 0 chr5 9794986 9795296 -189834854 - AluY SINE Alu -1 310 1 4303 91 10 15 chr5 9795300 9795884 -189834266 - L1PA10 LINE L1 0 6168 5588 1925 136 58 14 chr5 9795884 9796420 -189833730 + L1PA10 LINE L1 4996 5558 -610 1215 237 159 0 chr5 9796599 9796971 -189833179 - MER74C LTR ERVL -27 433 3 192 77 0 0 chr5 9796971 9796997 -189833153 + (GAAAA)n Simple_repeat Simple_repeat 5 30 0 285 223 0 0 chr5 9797791 9797885 -189832265 + (TA)n Simple_repeat Simple_repeat 2 95 0 217 267 40 79 chr5 9797902 9798003 -189832147 + MIR3 SINE MIR 77 173 -35 594 227 31 12 chr5 9799537 9799700 -189830450 - L1MA10 LINE L1 -1 6333 6168 1574 204 106 31 chr5 9799708 9800096 -189830054 - L1MA9 LINE L1 -2 6310 5894 23 33 0 0 chr5 9800181 9800211 -189829939 + AT_rich Low_complexity Low_complexity 1 30 0 297 250 0 0 chr5 9801520 9801580 -189828570 + MER81 DNA DNA 29 88 -26 230 219 0 0 chr5 9803373 9803414 -189826736 + (TG)n Simple_repeat Simple_repeat 2 42 0 1369 265 20 6 chr5 9804075 9804433 -189825717 - MER89 LTR ERV1 0 559 197 496 161 23 0 chr5 9804406 9804493 -189825657 - MER89 LTR ERV1 -470 89 1 * 2291 98 0 0 chr5 9805630 9805926 -189824224 + AluSq SINE Alu 1 296 -17 410 226 11 11 chr5 9809215 9809308 -189820842 - LTR16B LTR ERVL 0 464 372 279 301 188 19 chr5 9809317 9809626 -189820524 - L2 LINE L2 -1091 2223 1863 271 342 124 29 chr5 9809638 9809913 -189820237 - L2 LINE L2 -2782 532 232 43 20 0 0 chr5 9811596 9811646 -189818504 + AT_rich Low_complexity Low_complexity 1 50 0 1643 142 22 4 chr5 9811647 9811915 -189818235 - L1MA5A LINE L1 -4 6293 6021 558 281 18 4 chr5 9812028 9812227 -189817923 + L1MEc LINE L1 2062 2230 -4196 23 0 0 0 chr5 9812439 9812462 -189817688 + AT_rich Low_complexity Low_complexity 1 23 0 306 342 94 58 chr5 9813962 9814097 -189816053 - L2 LINE L2 0 3272 3143 2298 181 19 9 chr5 9814097 9814516 -189815634 + L1MA5 LINE L1 5871 6293 -7 306 342 94 58 chr5 9814516 9814743 -189815407 - L2 LINE L2 -129 3143 2897 396 145 0 9 chr5 9814914 9815002 -189815148 + L1PB4 LINE L1 5703 5788 -366 296 171 26 40 chr5 9815011 9815163 -189814987 + (TA)n Simple_repeat Simple_repeat 1 150 0 802 170 26 5 chr5 9815174 9815326 -189814824 + L1PB4 LINE L1 5759 5908 -248 5336 181 34 36 chr5 9815352 9816947 -189813203 - L1P5 LINE L1 -537 5617 4007 658 213 19 0 chr5 9816933 9817093 -189813057 + L1P5 LINE L1 3844 4006 -2140 * 672 268 33 22 chr5 9818330 9818513 -189811637 + MER5A DNA MER1_type 5 189 0 464 36 0 0 chr5 9818660 9818715 -189811435 - L1P LINE L1 -742 5413 5359 6607 29 7 0 chr5 9818715 9819439 -189810711 + L1PA3 LINE L1 5417 6152 -3 2475 72 0 0 chr5 9819812 9820104 -189810046 + AluY SINE Alu 1 292 -19 468 347 66 19 chr5 9820172 9820443 -189809707 - L2 LINE L2 -619 2695 2412 1848 186 3 43 chr5 9820975 9821030 -189809120 + MLT1A1 LTR MaLR 31 87 -278 1739 161 13 26 chr5 9821030 9821340 -189808810 + AluSx SINE Alu 1 306 -6 1848 186 3 43 chr5 9821340 9821633 -189808517 + MLT1A1 LTR MaLR 87 365 0 1575 190 196 0 chr5 9823571 9823929 -189806221 + MSTA LTR MaLR 1 428 0 199 321 75 22 chr5 9824012 9824146 -189806004 - MIR SINE MIR -3 259 119 399 41 0 0 chr5 9824390 9824439 -189805711 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 1860 142 17 3 chr5 9824585 9824874 -189805276 - AluSx SINE Alu -19 293 1 441 138 15 0 chr5 9824918 9824983 -189805167 + AluS SINE Alu 2 67 -246 3820 64 2 0 chr5 9825678 9826133 -189804017 - L1PA7 LINE L1 -4 6150 5695 464 104 0 0 chr5 9826138 9826205 -189803945 - L1P LINE L1 -3167 2979 2913 296 348 65 0 chr5 9826568 9826706 -189803444 + MIR SINE MIR 87 233 -29 261 57 0 0 chr5 9828569 9828604 -189801546 + (TG)n Simple_repeat Simple_repeat 1 35 0 1151 261 118 52 chr5 9831190 9831672 -189798478 - MER90 LTR ERV1 -9 605 92 4155 33 0 0 chr5 9832068 9832556 -189797594 - L1PA2 LINE L1 -1219 4927 4440 8375 12 0 2 chr5 9832556 9833780 -189796370 + L1PA2 LINE L1 4934 6155 0 2139 111 0 10 chr5 9833801 9834098 -189796052 + AluSg SINE Alu 1 294 -16 304 287 42 48 chr5 9834974 9835141 -189795009 + L2 LINE L2 2834 2999 -273 1662 237 121 29 chr5 9835872 9836328 -189793822 - MLT2B1 LTR ERVL -10 510 13 767 188 227 0 chr5 9836469 9836645 -189793505 - MER20 DNA MER1_type -3 216 1 1091 242 81 20 chr5 9836653 9836950 -189793200 + MER119 DNA MER1_type 1 315 -268 527 269 15 0 chr5 9836984 9837118 -189793032 + MER119 DNA MER1_type 448 583 0 1838 127 3 45 chr5 9837682 9838018 -189792132 + AluSx SINE Alu 3 326 0 903 291 107 46 chr5 9838305 9838830 -189791320 + MLT1G1 LTR MaLR 3 559 -36 624 259 74 54 chr5 9838962 9839259 -189790891 - LTR33A LTR ERVL 0 523 221 1720 102 33 126 chr5 9839262 9839596 -189790554 - AluSq SINE Alu -10 303 1 1469 341 26 39 chr5 9840833 9841294 -189788856 + L1PA14 LINE L1 5705 6159 -2 247 366 0 0 chr5 9841685 9841786 -189788364 + L2 LINE L2 3208 3308 -5 415 325 33 4 chr5 9842859 9843045 -189787105 - MLT1J2 LTR MaLR -15 534 347 434 316 26 0 chr5 9843664 9843819 -189786331 - MLT1J2 LTR MaLR -187 263 105 582 277 15 42 chr5 9843832 9844092 -189786058 + L1ME3A LINE L1 5917 6169 -1 1163 159 8 41 chr5 9844110 9844279 -189785871 + L1ME LINE L1 5192 5352 -814 1340 193 77 11 chr5 9844279 9844553 -189785597 + AluJb SINE Alu 1 292 -20 1163 159 8 41 chr5 9844553 9844668 -189785482 + L1ME LINE L1 5352 5469 -697 24 32 0 0 chr5 9845588 9845619 -189784531 + AT_rich Low_complexity Low_complexity 1 31 0 1982 141 63 30 chr5 9847130 9847493 -189782657 - THE1C LTR MaLR 0 375 1 1622 178 57 48 chr5 9847922 9847944 -189782206 + MLT1A2 LTR MaLR 1 21 -353 2665 136 30 28 chr5 9847944 9848370 -189781780 + MSTA LTR MaLR 1 427 -1 1622 178 57 48 chr5 9848370 9848437 -189781713 + MLT1A2 LTR MaLR 21 86 -288 1498 196 94 24 chr5 9848437 9848778 -189781372 - MLT1A1 LTR MaLR 0 365 1 1622 178 57 48 chr5 9848778 9849058 -189781092 + MLT1A2 LTR MaLR 86 374 0 1450 170 0 8 chr5 9850281 9850528 -189779622 - L1MA10 LINE L1 -2 6332 6088 1042 156 50 6 chr5 9850529 9850708 -189779442 + MSTA LTR MaLR 1 187 -241 843 83 0 0 chr5 9850717 9850826 -189779324 + MSTA LTR MaLR 320 428 0 2309 200 32 6 chr5 9850845 9851344 -189778806 - L1MB1 LINE L1 -119 6070 5559 299 188 41 18 chr5 9852094 9852264 -189777886 + (TG)n Simple_repeat Simple_repeat 1 174 0 556 91 27 59 chr5 9852300 9852486 -189777664 + (TG)n Simple_repeat Simple_repeat 1 180 0 281 184 29 29 chr5 9852597 9852771 -189777379 + (TG)n Simple_repeat Simple_repeat 1 174 0 482 155 39 13 chr5 9852790 9853026 -189777124 + (TG)n Simple_repeat Simple_repeat 1 242 0 536 170 7 85 chr5 9854255 9854325 -189775825 + MLT1D LTR MaLR 376 431 -74 2011 160 0 0 chr5 9854325 9854637 -189775513 - AluSx SINE Alu 0 312 1 536 170 7 85 chr5 9854637 9854707 -189775443 + MLT1D LTR MaLR 431 505 0 2794 114 18 5 chr5 9855289 9855727 -189774423 + L1PB2 LINE L1 5705 6148 -3 19769 58 0 7 chr5 9856928 9860281 -189769869 + L1PA6 LINE L1 2805 6148 -6 661 154 8 8 chr5 9860342 9860472 -189769678 + CT-rich Low_complexity Low_complexity 3 132 0 21 36 0 0 chr5 9861681 9861709 -189768441 + AT_rich Low_complexity Low_complexity 1 28 0 499 277 114 42 chr5 9862616 9862923 -189767227 - LTR16B LTR ERVL -135 329 1 542 261 0 0 chr5 9864081 9864200 -189765950 + Tigger3(Golem) DNA MER2_type 2 120 -2909 1188 227 109 91 chr5 9866278 9866904 -189763246 - MLT1E1 LTR MaLR 0 654 18 452 282 18 72 chr5 9867018 9867295 -189762855 - MLT1E1-int LTR MaLR -141 1230 969 1961 79 4 0 chr5 9867305 9867559 -189762591 - AluY SINE Alu 0 311 57 259 266 21 63 chr5 9867936 9868079 -189762071 + MER65B LTR ERV1 1 137 -394 2357 52 10 0 chr5 9869211 9869499 -189760651 + AluY SINE Alu 1 291 -20 365 0 22 0 chr5 9869508 9869553 -189760597 + (TAAAA)n Simple_repeat Simple_repeat 1 46 0 3123 169 53 46 chr5 9870061 9871040 -189759110 - L1MA8 LINE L1 -684 5607 4634 2406 181 45 22 chr5 9871041 9871643 -189758507 + L1MA8 LINE L1 5617 6232 -59 22 56 0 0 chr5 9872299 9872335 -189757815 + AT_rich Low_complexity Low_complexity 1 36 0 429 316 49 49 chr5 9872994 9873238 -189756912 - MIR SINE MIR 0 262 19 247 274 62 84 chr5 9873429 9873608 -189756542 + HAL1 LINE L1 2 176 -2331 692 285 92 15 chr5 9873642 9874108 -189756042 - MER20B DNA MER1_type -1 782 281 313 278 62 0 chr5 9874170 9874267 -189755883 + HAL1 LINE L1 1548 1650 -857 2342 103 0 10 chr5 9874781 9875092 -189755058 - AluSq SINE Alu -5 308 1 1216 233 11 32 chr5 9875301 9875649 -189754501 + MLT2C1 LTR ERVL 3 343 -54 813 105 29 6 chr5 9875649 9875821 -189754329 + (TCTA)n Simple_repeat Simple_repeat 2 177 0 566 244 76 0 chr5 9877311 9877483 -189752667 - MER5A DNA MER1_type -3 186 2 21 57 0 0 chr5 9877873 9877908 -189752242 + AT_rich Low_complexity Low_complexity 1 35 0 228 379 9 26 chr5 9878627 9878743 -189751407 - MER5A DNA MER1_type -9 180 67 2240 271 52 11 chr5 9878822 9879490 -189750660 + L1M1 LINE L1 17 712 -6853 1742 135 14 14 chr5 9879484 9879781 -189750369 + L1P3 LINE L1 1 297 -5578 * 5444 126 24 27 chr5 9879883 9880902 -189749248 + L1P3 LINE L1 271 1312 -4734 14140 169 45 62 chr5 9880965 9881038 -189749112 + L1M1 LINE L1 700 773 -6792 5490 109 5 6 chr5 9881038 9881819 -189748331 - LTR17 LTR ERV1 0 780 1 14140 169 45 62 chr5 9881819 9886648 -189743502 + L1M1 LINE L1 773 5536 -2029 330 265 155 22 chr5 9887126 9887307 -189742843 + L1MC4a LINE L1 7510 7887 -108 22 0 0 0 chr5 9887413 9887435 -189742715 + AT_rich Low_complexity Low_complexity 1 22 0 210 143 0 0 chr5 9888771 9888806 -189741344 + (TTCCC)n Simple_repeat Simple_repeat 1 35 0 323 292 19 43 chr5 9889365 9889574 -189740576 + MLT1J1 LTR MaLR 234 437 -9 491 294 11 39 chr5 9890397 9890577 -189739573 - L2 LINE L2 -628 2686 2512 991 288 92 22 chr5 9890817 9891320 -189738830 + L2 LINE L2 2394 2931 -383 337 302 90 54 chr5 9891340 9891562 -189738588 + L2 LINE L2 3075 3304 -9 209 182 0 65 chr5 9891859 9891936 -189738214 + T-rich Low_complexity Low_complexity 3 74 0 387 41 0 0 chr5 9892455 9892504 -189737646 + (CA)n Simple_repeat Simple_repeat 2 50 0 242 253 13 13 chr5 9894327 9894402 -189735748 + MLT1L LTR MaLR 1 75 -540 369 255 54 88 chr5 9894544 9894783 -189735367 + MLT1J LTR MaLR 228 458 -53 317 289 33 25 chr5 9897067 9897188 -189732962 + L1MCb LINE L1 449 570 -5475 406 248 32 16 chr5 9897275 9897400 -189732750 + L1MCb LINE L1 570 696 -5349 1582 255 47 55 chr5 9897402 9898297 -189731853 + L1M4 LINE L1 2645 3532 -2614 1162 231 3 60 chr5 9898314 9898613 -189731537 - AluJb SINE Alu -30 282 1 637 186 87 50 chr5 9898738 9898899 -189731251 - MER5A DNA MER1_type -5 184 18 312 193 84 0 chr5 9899216 9899299 -189730851 + MLT1J LTR MaLR 526 615 -9 210 288 0 0 chr5 9900130 9900189 -189729961 + GA-rich Low_complexity Low_complexity 1 59 0 183 360 44 9 chr5 9905181 9905295 -189724855 - L2 LINE L2 -640 2674 2557 21 36 0 0 chr5 9906564 9906592 -189723558 + AT_rich Low_complexity Low_complexity 1 28 0 2486 51 0 3 chr5 9907157 9907450 -189722700 + AluY SINE Alu 1 292 -19 2331 159 4 50 chr5 9907856 9908320 -189721830 - MER65A LTR ERV1 0 445 3 1100 267 51 41 chr5 9910703 9911115 -189719035 + LTR40a LTR ERVL 104 519 0 878 238 0 15 chr5 9911790 9911992 -189718158 + L1PA16 LINE L1 2 200 -6587 369 309 47 73 chr5 9911994 9912295 -189717855 + L1PA16 LINE L1 434 726 -6061 4838 248 20 25 chr5 9912477 9915322 -189714828 + L1PA16 LINE L1 1323 4136 -2661 1530 177 57 38 chr5 9915339 9915707 -189714443 - THE1C LTR MaLR 0 375 1 5971 162 14 54 chr5 9915707 9916982 -189713168 - THE1C-int LTR MaLR 0 1580 357 4794 167 11 9 chr5 9917093 9918454 -189711696 + L1PA16 LINE L1 5435 6811 -6 253 288 0 0 chr5 9919169 9919249 -189710901 - MER65A-int LTR ERV1 -134 6667 6588 1699 216 17 11 chr5 9919936 9920292 -189709858 + MLT1A1 LTR MaLR 4 361 -4 835 328 30 7 chr5 9920297 9920730 -189709420 + L1MEc LINE L1 292 734 -5873 300 269 35 28 chr5 9923042 9923187 -189706963 + LTR16C LTR ERVL 344 489 -2 346 270 135 24 chr5 9923307 9923433 -189706717 - MER91C DNA MER1_type 0 140 1 200 299 75 0 chr5 9924469 9924536 -189705614 - MIR SINE MIR -81 181 110 25 31 0 0 chr5 9925210 9925242 -189704908 + AT_rich Low_complexity Low_complexity 1 32 0 257 208 14 0 chr5 9925586 9925658 -189704492 + (TA)n Simple_repeat Simple_repeat 2 74 0 359 243 29 71 chr5 9926755 9926965 -189703185 + L1MA10 LINE L1 6134 6334 0 506 218 34 58 chr5 9927713 9927919 -189702231 + L1MA10 LINE L1 6134 6334 0 2031 163 0 0 chr5 9928295 9928589 -189701561 + AluSx SINE Alu 1 294 -18 2065 144 0 22 chr5 9928641 9928960 -189701190 + AluSx SINE Alu 1 312 0 1281 147 77 18 chr5 9929170 9929442 -189700708 - MER46B DNA MER2_type -73 163 1 218 222 34 34 chr5 9931093 9931210 -189698940 + (TA)n Simple_repeat Simple_repeat 2 118 0 21 0 0 0 chr5 9931494 9931515 -189698635 + AT_rich Low_complexity Low_complexity 1 21 0 443 127 0 0 chr5 9931601 9931672 -189698478 + MADE1 DNA Mariner 1 71 -9 1870 100 82 0 chr5 9931861 9932141 -189698009 + AluSp SINE Alu 1 303 -10 2277 47 22 0 chr5 9932464 9932815 -189697335 + AluY SINE Alu 5 311 0 999 260 32 63 chr5 9934902 9935455 -189694695 + Charlie2a DNA MER1_type 1546 2081 -781 27 29 0 0 chr5 9935468 9935502 -189694648 + AT_rich Low_complexity Low_complexity 1 34 0 227 191 16 16 chr5 9935540 9935603 -189694547 + Charlie2a DNA MER1_type 2109 2171 -691 836 261 89 65 chr5 9935671 9936463 -189693687 + L1MEc LINE L1 1275 2046 -4380 2329 94 3 0 chr5 9936463 9936761 -189693389 - AluSp SINE Alu -13 300 2 836 261 89 65 chr5 9936761 9937390 -189692760 + L1MEc LINE L1 2046 2868 -3558 242 122 0 20 chr5 9937392 9937441 -189692709 + (GGA)n Simple_repeat Simple_repeat 3 50 0 1093 256 0 9 chr5 9937441 9937762 -189692388 + L1MEc LINE L1 2878 3195 -3231 955 142 17 94 chr5 9937820 9938090 -189692060 + L1M1 LINE L1 5223 5474 -743 21 36 0 0 chr5 9938458 9938486 -189691664 + AT_rich Low_complexity Low_complexity 1 28 0 1558 152 194 8 chr5 9939024 9939380 -189690770 + MSTA LTR MaLR 7 428 0 1863 162 72 17 chr5 9939594 9939939 -189690211 - THE1B LTR MaLR 0 364 1 23 92 0 0 chr5 9940699 9940764 -189689386 + AT_rich Low_complexity Low_complexity 1 65 0 7716 17 3 0 chr5 9940993 9942350 -189687800 + L1PA3 LINE L1 4827 6187 0 22 0 0 0 chr5 9943313 9943335 -189686815 + AT_rich Low_complexity Low_complexity 1 22 0 407 136 0 0 chr5 9943402 9943468 -189686682 - Alu SINE Alu -12 300 235 234 0 0 0 chr5 9944229 9944255 -189685895 + (CAAAAA)n Simple_repeat Simple_repeat 3 28 0 1490 196 54 4 chr5 9944261 9944658 -189685492 + L1ME LINE L1 5176 5589 -744 939 234 20 16 chr5 9944670 9944914 -189685236 - L1PB4 LINE L1 -14 6142 5898 233 294 0 78 chr5 9945779 9945881 -189684269 + L2 LINE L2 3196 3289 -24 392 304 155 19 chr5 9945904 9946111 -189684039 + MIR SINE MIR 28 262 0 350 306 22 55 chr5 9948273 9948456 -189681694 - MER5B DNA MER1_type 0 178 2 281 231 128 26 chr5 9948924 9949041 -189681109 + LTR16A LTR ERVL 320 448 -2 2096 137 23 0 chr5 9950566 9950908 -189679242 - L1PA14 LINE L1 0 6161 5812 274 256 0 0 chr5 9951569 9951651 -189678499 + L1ME LINE L1 5674 5755 -415 27 29 0 0 chr5 9952013 9952047 -189678103 + AT_rich Low_complexity Low_complexity 1 34 0 2531 107 28 0 chr5 9953074 9953428 -189676722 + THE1B LTR MaLR 1 364 0 552 173 29 7 chr5 9955944 9956083 -189674067 + GA-rich Low_complexity Low_complexity 3 144 0 4734 234 29 8 chr5 9956443 9957821 -189672329 + L1M4 LINE L1 3631 5037 -1109 1930 167 3 3 chr5 9957995 9958300 -189671850 - AluSx SINE Alu -7 305 1 446 215 37 0 chr5 9960168 9960275 -189669875 + L1MA4 LINE L1 5970 6080 -220 281 26 26 0 chr5 9961015 9961053 -189669097 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 2589 133 30 0 chr5 9962052 9962451 -189667699 - LTR57 LTR ERVL 0 411 1 2044 121 0 39 chr5 9963076 9963382 -189666768 - AluY SINE Alu -15 296 3 332 227 114 23 chr5 9964149 9964281 -189665869 + L2 LINE L2 3112 3255 -58 324 343 112 12 chr5 9964328 9964570 -189665580 + L2 LINE L2 1990 2255 -1059 2295 87 0 10 chr5 9965044 9965355 -189664795 - AluY SINE Alu -3 308 1 488 302 19 6 chr5 9966503 9966662 -189663488 + MIR SINE MIR 60 220 -42 460 215 56 0 chr5 9967035 9967142 -189663008 - MER68 LTR ERV1 0 562 450 6196 205 28 5 chr5 9967143 9968643 -189661507 - L1 LINE L1 -1135 5011 3478 27 29 0 0 chr5 9969391 9969425 -189660725 + AT_rich Low_complexity Low_complexity 1 34 0 198 326 33 33 chr5 9971919 9972011 -189658139 - L2 LINE L2 -19 3253 3162 287 284 53 110 chr5 9972371 9972653 -189657497 + L2 LINE L2 2988 3253 -19 889 177 7 131 chr5 9974272 9974555 -189655595 - MLT1A1 LTR MaLR -2 363 116 12122 28 4 0 chr5 9974679 9976872 -189653278 - L1PA3 LINE L1 -70 6085 3883 22 56 0 0 chr5 9977222 9977258 -189652892 + AT_rich Low_complexity Low_complexity 1 36 0 2408 63 3 0 chr5 9977757 9978057 -189652093 - AluY SINE Alu -10 301 1 380 213 8 0 chr5 9978659 9978781 -189651369 + (TA)n Simple_repeat Simple_repeat 1 123 0 2261 76 3 0 chr5 9980225 9980526 -189649624 - AluY SINE Alu -9 302 1 226 279 36 0 chr5 9980761 9980872 -189649278 - L1ME LINE L1 -330 5791 5677 237 281 21 42 chr5 9981122 9981218 -189648932 + L1MDb LINE L1 332 425 -6004 438 144 89 0 chr5 9981399 9981489 -189648661 + MER4A LTR ERV1 1 98 -566 1556 139 25 68 chr5 9981490 9981850 -189648300 + MER4A LTR ERV1 262 664 0 269 136 0 0 chr5 9981934 9981978 -189648172 - L1MB1 LINE L1 0 6168 6125 1905 229 69 9 chr5 9982201 9982734 -189647416 - MER34B LTR ERV1 0 565 1 1241 173 121 72 chr5 9982893 9983322 -189646828 + LTR7 LTR ERV1 1 450 0 3281 217 62 72 chr5 9983322 9985379 -189644771 + HERVH LTR ERV1 1 2047 -5666 363 191 0 0 chr5 9985379 9985442 -189644708 + MER4A LTR ERV1 378 440 -224 506 310 77 75 chr5 9986004 9986443 -189643707 + L1MD3 LINE L1 2 441 -5604 738 257 58 56 chr5 9987042 9987455 -189642695 + L1MD3 LINE L1 745 1158 -4888 * 1274 80 0 45 chr5 9987445 9987592 -189642558 + L1P5 LINE L1 5592 5729 -422 1908 134 7 20 chr5 9987592 9987890 -189642260 + AluSq SINE Alu 1 294 -19 1274 80 0 45 chr5 9987890 9987941 -189642209 + L1P5 LINE L1 5729 5781 -370 336 48 0 0 chr5 9987944 9987986 -189642164 + (TG)n Simple_repeat Simple_repeat 2 43 0 401 231 56 42 chr5 9988041 9988184 -189641966 + L1MD3 LINE L1 1969 2113 -4451 1289 293 57 18 chr5 9988246 9989138 -189641012 + L1MD3 LINE L1 3609 4535 -2029 679 255 64 85 chr5 9989145 9989521 -189640629 + MSTD LTR MaLR 6 373 -23 2779 256 99 37 chr5 9989540 9989719 -189640431 + L1MD3 LINE L1 4613 4779 -1785 2062 144 3 3 chr5 9989719 9990025 -189640125 + AluSc SINE Alu 1 306 -3 2779 256 99 37 chr5 9990025 9992143 -189638007 + L1MD3 LINE L1 4779 5469 -1095 297 0 0 0 chr5 9992143 9992176 -189637974 + (CA)n Simple_repeat Simple_repeat 2 34 0 2779 256 99 37 chr5 9992176 9992547 -189637603 + L1MD3 LINE L1 5469 5815 -749 1594 223 43 28 chr5 9992877 9993273 -189636877 - L1MD1 LINE L1 -6 6236 5847 2483 60 0 0 chr5 9993273 9993574 -189636576 - AluY SINE Alu -10 301 1 1594 223 43 28 chr5 9993574 9994281 -189635869 - L1MD1 LINE L1 -395 5847 4968 4548 227 62 49 chr5 9994335 9996048 -189634102 + L1MDb LINE L1 8 1734 -4672 1738 162 68 31 chr5 9996088 9996287 -189633863 - THE1B LTR MaLR 0 364 145 2183 131 0 0 chr5 9996287 9996585 -189633565 - AluSq SINE Alu -15 298 1 1738 162 68 31 chr5 9996585 9996736 -189633414 - THE1B LTR MaLR -219 145 1 532 224 0 9 chr5 9996736 9996852 -189633298 - L1MDb LINE L1 -6252 157 43 452 283 34 34 chr5 9997146 9997379 -189632771 + L1ME1 LINE L1 5928 6160 -6 2183 111 7 3 chr5 9997481 9997778 -189632372 - AluSp SINE Alu -4 309 12 792 203 154 24 chr5 9997847 9998092 -189632058 - MLT1B LTR MaLR 0 390 114 338 183 0 0 chr5 9998092 9998152 -189631998 - MER52A LTR ERV1 0 1755 1696 3393 227 48 43 chr5 9998159 9999292 -189630858 - MER52A LTR ERV1 -562 1193 56 678 158 201 11 chr5 10000371 10000555 -189629595 - MER90 LTR ERV1 -14 600 382 744 241 43 35 chr5 10000569 10000826 -189629324 - MER90 LTR ERV1 -310 265 7 2099 121 0 0 chr5 10000916 10001227 -189628923 - AluSc SINE Alu 0 311 1 2848 7 0 0 chr5 10001345 10001652 -189628498 + AluYa5 SINE Alu 1 307 -4 22 0 0 0 chr5 10002979 10003001 -189627149 + AT_rich Low_complexity Low_complexity 1 22 0 2018 114 0 0 chr5 10003098 10003369 -189626781 - AluSc SINE Alu -4 305 35 22 0 0 0 chr5 10003886 10003908 -189626242 + AT_rich Low_complexity Low_complexity 1 22 0 2870 94 18 16 chr5 10003976 10004365 -189625785 + L1PB2 LINE L1 5711 6103 -48 2326 124 34 8 chr5 10004365 10004720 -189625430 - THE1B LTR MaLR 0 364 1 2870 94 18 16 chr5 10004720 10004768 -189625382 + L1PB2 LINE L1 6103 6149 -2 349 210 40 30 chr5 10005224 10005324 -189624826 + MER94 DNA DNA 1 101 -33 609 336 119 30 chr5 10007207 10007698 -189622452 - L2 LINE L2 -19 3294 2747 1523 154 67 83 chr5 10007698 10008133 -189622017 - MSTB1 LTR MaLR -4 428 1 609 336 119 30 chr5 10008133 10008163 -189621987 - L2 LINE L2 -566 2747 2721 513 167 0 0 chr5 10010083 10010185 -189619965 + (TGGA)n Simple_repeat Simple_repeat 1 102 0 272 357 43 47 chr5 10010670 10010947 -189619203 - L2 LINE L2 -1297 2017 1742 1069 140 57 83 chr5 10011956 10012220 -189617930 - THE1C LTR MaLR -118 257 1 7517 153 16 8 chr5 10012424 10013745 -189616405 + Tigger4(Zombi) DNA MER2_type 103 1434 -1297 1247 137 155 161 chr5 10013745 10014287 -189615863 - MER4A LTR ERV1 0 664 126 311 111 0 19 chr5 10014297 10014351 -189615799 + (TTTC)n Simple_repeat Simple_repeat 1 53 0 783 97 8 8 chr5 10014351 10014475 -189615675 - MER4A LTR ERV1 -540 124 1 7365 135 20 9 chr5 10014487 10015762 -189614388 + Tigger4(Zombi) DNA MER2_type 1443 2730 -1 727 204 151 70 chr5 10015855 10016212 -189613938 - MLT1B LTR MaLR -4 386 1 656 238 0 0 chr5 10016317 10016439 -189613711 - FLAM_C SINE Alu -19 124 3 1926 178 21 40 chr5 10016833 10017255 -189612895 - MLT2D LTR ERVL 0 414 1 808 224 24 0 chr5 10018066 10018231 -189611919 - FRAM SINE Alu -10 166 1 2493 60 0 0 chr5 10018286 10018584 -189611566 - AluY SINE Alu -13 298 1 1113 292 84 11 chr5 10018693 10019159 -189610991 + ERVL LTR ERVL 1803 2302 -3462 1559 282 71 33 chr5 10019226 10020531 -189609619 + ERVL LTR ERVL 2416 3848 -1916 212 195 39 104 chr5 10021136 10021213 -189608937 - MIR3 SINE MIR -36 172 101 309 261 268 0 chr5 10021297 10021439 -189608711 - MIR SINE MIR -11 251 72 5564 156 26 3 chr5 10022577 10022635 -189607515 + Tigger1 DNA MER2_type 1 56 -2362 195 42 0 0 chr5 10022635 10022659 -189607491 + (TA)n Simple_repeat Simple_repeat 1 24 0 5564 156 26 3 chr5 10022659 10023602 -189606548 + Tigger1 DNA MER2_type 56 1025 -1393 509 146 0 0 chr5 10023600 10023682 -189606468 + Tigger1 DNA MER2_type 2337 2418 0 * 2299 117 3 0 chr5 10023754 10024063 -189606087 - AluSg SINE Alu 0 310 1 1881 129 161 13 chr5 10024382 10024755 -189605395 + MSTA LTR MaLR 1 428 0 199 229 169 36 chr5 10025609 10025692 -189604458 + L2 LINE L2 3187 3280 -33 * 349 297 99 56 chr5 10025687 10025919 -189604231 - MIR SINE MIR -2 260 19 319 326 58 7 chr5 10027773 10027911 -189602239 - MIR SINE MIR -110 152 8 24 32 0 0 chr5 10028177 10028208 -189601942 + AT_rich Low_complexity Low_complexity 1 31 0 334 346 100 4 chr5 10028364 10028604 -189601546 - L2 LINE L2 -431 2883 2621 22 70 0 0 chr5 10029270 10029313 -189600837 + AT_rich Low_complexity Low_complexity 1 43 0 354 284 93 19 chr5 10030734 10030896 -189599254 + MLT1I LTR MaLR 226 399 -10 449 211 159 9 chr5 10031788 10032020 -189598130 + MER97a DNA MER1_type? 586 852 -42 747 248 96 11 chr5 10032042 10032324 -189597826 - L2 LINE L2 -1197 2117 1812 1813 148 34 14 chr5 10032364 10032661 -189597489 + AluJb SINE Alu 1 303 -9 22 0 0 0 chr5 10032775 10032797 -189597353 + AT_rich Low_complexity Low_complexity 1 22 0 622 258 148 9 chr5 10033030 10033259 -189596891 + MIR SINE MIR 2 262 0 2366 66 0 3 chr5 10033284 10033572 -189596578 - AluY SINE Alu -24 287 1 1261 277 124 15 chr5 10034529 10035070 -189595080 + MER90 LTR ERV1 11 573 -2 489 142 242 8 chr5 10035138 10035258 -189594892 - MER4C LTR ERV1 -18 447 300 1104 148 136 47 chr5 10035390 10035707 -189594443 - MER4A LTR ERV1 -319 345 1 521 306 0 8 chr5 10035711 10035845 -189594305 - MIR SINE MIR -110 152 20 531 283 98 4 chr5 10036199 10036443 -189593707 - L1MC4 LINE L1 -144 7898 7632 515 267 0 0 chr5 10036517 10036652 -189593498 - L1MC4a LINE L1 -514 7294 7160 1336 219 52 11 chr5 10036655 10037021 -189593129 - L1MC4 LINE L1 -963 7079 6699 353 311 96 33 chr5 10037334 10037762 -189592388 - L1ME3A LINE L1 -312 5858 5404 431 304 43 58 chr5 10037815 10038469 -189591681 - L1ME3A LINE L1 -1441 4705 4062 2386 127 19 3 chr5 10038490 10038859 -189591291 - THE1C LTR MaLR 0 375 1 9261 127 40 41 chr5 10038859 10040441 -189589709 - THE1C-int LTR MaLR 0 1580 1 2038 155 11 6 chr5 10040441 10040796 -189589354 - THE1C LTR MaLR 0 375 19 239 321 36 0 chr5 10040923 10041060 -189589090 - L1ME3A LINE L1 -2502 3644 3503 1422 210 0 11 chr5 10041074 10041350 -189588800 + MER68 LTR ERV1 290 562 0 645 296 68 27 chr5 10041354 10041722 -189588428 - L1ME3A LINE L1 -2730 3416 3034 403 272 5 60 chr5 10041880 10042064 -189588086 - MER52A LTR ERV1 0 1755 1582 * 924 234 17 78 chr5 10042044 10042748 -189587402 - MER52A LTR ERV1 -147 895 283 9370 122 18 7 chr5 10042753 10044218 -189585932 - MER52-int LTR ERV1 0 7091 5611 202 305 0 37 chr5 10044570 10044652 -189585498 - MIR SINE MIR -31 231 153 207 161 0 0 chr5 10045343 10045374 -189584776 + (CAT)n Simple_repeat Simple_repeat 3 33 0 387 363 29 29 chr5 10045447 10045618 -189584532 + MIR3 SINE MIR 16 186 -22 2174 112 23 3 chr5 10046219 10046552 -189583598 + AluSg SINE Alu 1 339 0 21 0 0 0 chr5 10046736 10046757 -189583393 + AT_rich Low_complexity Low_complexity 1 21 0 1313 224 46 53 chr5 10047063 10047113 -189583037 + MER57B LTR ERV1 1 50 -384 2332 129 8 21 chr5 10047113 10047493 -189582657 - THE1C LTR MaLR 0 375 1 1313 224 46 53 chr5 10047493 10047874 -189582276 + MER57B LTR ERV1 50 429 -5 369 277 44 38 chr5 10047896 10048055 -189582095 + MER57B-int LTR ERV1 3 162 -7375 2544 69 0 0 chr5 10048233 10048537 -189581613 - AluY SINE Alu -7 304 1 23 0 0 0 chr5 10048651 10048674 -189581476 + AT_rich Low_complexity Low_complexity 1 23 0 2023 142 7 0 chr5 10048674 10048969 -189581181 - AluSx SINE Alu -15 297 1 207 0 0 0 chr5 10049703 10049726 -189580424 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 265 315 0 27 chr5 10050951 10051062 -189579088 + MER57-int LTR ERV1 3304 3411 -4345 254 359 0 0 chr5 10052373 10052451 -189577699 + MER57-int LTR ERV1 3784 3861 -2940 1410 255 17 43 chr5 10052529 10053012 -189577138 + MER57-int LTR ERV1 5277 5746 -1791 663 358 17 33 chr5 10052983 10053675 -189576475 + MER57-int LTR ERV1 2093 2773 -1874 * 1681 144 157 82 chr5 10053678 10054054 -189576096 - MER4A LTR ERV1 0 664 261 585 143 10 10 chr5 10054054 10054152 -189575998 - MER4A LTR ERV1 -566 98 1 762 220 7 0 chr5 10054166 10054307 -189575843 + MER57-int LTR ERV1 5953 6094 -1443 233 181 0 69 chr5 10054332 10054404 -189575746 - LTR64 LTR ERVK -2 556 490 6479 157 15 7 chr5 10054902 10055982 -189574168 + Tigger2 DNA MER2_type 1630 2717 -1 22 0 0 0 chr5 10057081 10057103 -189573047 + AT_rich Low_complexity Low_complexity 1 22 0 2146 136 95 3 chr5 10057181 10057662 -189572488 - LTR49 LTR ERV1 0 595 1 3696 174 13 14 chr5 10057763 10058469 -189571681 + MER67C LTR ERV1 2 706 -4 2825 200 20 75 chr5 10058592 10059323 -189570827 - LTR8 LTR ERV1 0 691 1 1753 168 10 30 chr5 10059515 10059819 -189570331 - AluJb SINE Alu -12 300 3 279 309 109 48 chr5 10060314 10060479 -189569671 - MIR SINE MIR -81 181 7 4823 172 27 5 chr5 10061075 10061958 -189568192 - MER4D LTR ERV1 0 903 1 23 0 0 0 chr5 10063771 10063794 -189566356 + AT_rich Low_complexity Low_complexity 1 23 0 196 220 20 0 chr5 10064246 10064296 -189565854 + MER5B DNA MER1_type 1 51 -127 3245 245 94 42 chr5 10064824 10065265 -189564885 + L1M3e LINE L1 1383 1799 -5307 1591 176 70 25 chr5 10065265 10065624 -189564526 - THE1C LTR MaLR 0 375 1 3245 245 94 42 chr5 10065624 10065765 -189564385 + L1M3e LINE L1 1799 1931 -5175 408 20 0 0 chr5 10065765 10065814 -189564336 + (CA)n Simple_repeat Simple_repeat 2 50 0 3245 245 94 42 chr5 10065814 10068315 -189561835 + L1M3e LINE L1 1931 4290 -2816 263 259 0 0 chr5 10068316 10068370 -189561780 + Tigger7 DNA MER2_type 2 55 -2432 * 764 161 0 36 chr5 10068365 10068533 -189561617 + Tigger7 DNA MER2_type 2234 2395 -96 2180 104 0 0 chr5 10068604 10068919 -189561231 + AluY SINE Alu 1 315 0 2046 180 26 0 chr5 10068978 10069356 -189560794 + MLT1B LTR MaLR 3 390 0 375 288 101 14 chr5 10070710 10070849 -189559301 - MIR SINE MIR -17 245 95 192 318 45 27 chr5 10071010 10071120 -189559030 + L2 LINE L2 3161 3272 0 2057 158 97 8 chr5 10072168 10072561 -189557589 - MSTA LTR MaLR 0 428 1 724 260 29 0 chr5 10073315 10073488 -189556662 + MER45A DNA AcHobo 1 178 0 2295 137 11 8 chr5 10075048 10075406 -189554744 + THE1B LTR MaLR 1 359 -5 2251 85 0 53 chr5 10075406 10075724 -189554426 + AluSp SINE Alu 1 301 -12 207 0 0 0 chr5 10076652 10076675 -189553475 + (T)n Simple_repeat Simple_repeat 1 23 0 335 255 32 21 chr5 10076737 10076831 -189553319 - MLT1L LTR MaLR -210 405 311 587 353 39 24 chr5 10077003 10077337 -189552813 - MLT1J LTR MaLR -156 355 17 819 231 29 0 chr5 10077520 10077693 -189552457 + MER45A DNA AcHobo 1 178 0 315 346 12 0 chr5 10078174 10078336 -189551814 + A-rich Low_complexity Low_complexity 3 166 0 22 70 0 0 chr5 10078629 10078672 -189551478 + AT_rich Low_complexity Low_complexity 1 43 0 25 0 0 0 chr5 10078852 10078877 -189551273 + AT_rich Low_complexity Low_complexity 1 25 0 9571 121 2 1 chr5 10078884 10081143 -189549007 - L1PA8 LINE L1 -3 6169 3908 2060 146 132 5 chr5 10081433 10081811 -189548339 - MSTA LTR MaLR 0 428 3 180 0 0 0 chr5 10082222 10082242 -189547908 + (TTTTA)n Simple_repeat Simple_repeat 1 20 0 3486 80 4 6 chr5 10082242 10082718 -189547432 - L1PA8 LINE L1 -23 6149 5675 213 290 0 10 chr5 10083213 10083313 -189546837 + (TTG)n Simple_repeat Simple_repeat 2 100 0 246 136 0 0 chr5 10083321 10083365 -189546785 + (TGG)n Simple_repeat Simple_repeat 1 44 0 266 329 129 34 chr5 10083669 10083981 -189546169 + L2 LINE L2 2729 3070 -243 1246 226 104 44 chr5 10084573 10085100 -189545050 - L1MC4 LINE L1 -1 8041 7483 285 257 14 0 chr5 10085091 10085165 -189544985 - L1MC4a LINE L1 -1383 6425 6351 * 1228 278 33 14 chr5 10085167 10085588 -189544562 - L1ME2 LINE L1 -9 6155 5727 459 228 63 16 chr5 10085588 10085715 -189544435 - MLT2F LTR ERVL 0 663 531 3739 164 50 10 chr5 10085715 10086396 -189543754 - L1P3 LINE L1 -5733 728 21 1375 136 80 31 chr5 10086419 10086705 -189543445 - THE1C LTR MaLR -75 300 1 34 84 0 0 chr5 10086982 10087065 -189543085 + AT_rich Low_complexity Low_complexity 1 83 0 315 0 0 0 chr5 10087099 10087134 -189543016 + (TG)n Simple_repeat Simple_repeat 2 36 0 1292 128 0 0 chr5 10087306 10087493 -189542657 - AluSg/x SINE Alu 0 312 126 22 35 0 0 chr5 10088136 10088165 -189541985 + AT_rich Low_complexity Low_complexity 1 29 0 2650 35 0 10 chr5 10088227 10088541 -189541609 - AluY SINE Alu 0 311 1 24 32 0 0 chr5 10088720 10088751 -189541399 + AT_rich Low_complexity Low_complexity 1 31 0 367 215 99 25 chr5 10088877 10088998 -189541152 + MER5A DNA MER1_type 59 188 -1 23 0 0 0 chr5 10089449 10089472 -189540678 + AT_rich Low_complexity Low_complexity 1 23 0 267 214 0 18 chr5 10089559 10089615 -189540535 + Tigger7 DNA MER2_type 1 55 -284 * 1273 113 9 5 chr5 10089613 10089825 -189540325 + Tigger7 DNA MER2_type 2335 2547 -40 207 88 0 0 chr5 10090043 10090077 -189540073 + (A)n Simple_repeat Simple_repeat 1 34 0 708 218 81 0 chr5 10090652 10090826 -189539324 + MER5A DNA MER1_type 1 188 -1 399 223 8 40 chr5 10091466 10091598 -189538552 - L1MB7 LINE L1 -1 6173 6058 2372 180 40 67 chr5 10093656 10094499 -189535651 + MER21A LTR ERV1 1 930 -1 535 236 43 7 chr5 10097562 10097702 -189532448 - LTR52 LTR ERVL 0 421 277 55 86 0 0 chr5 10098816 10098955 -189531195 + AT_rich Low_complexity Low_complexity 1 139 0 1317 283 110 41 chr5 10098996 10099780 -189530370 - HAL1 LINE L1 -100 2407 1570 1350 194 90 4 chr5 10099780 10100058 -189530092 - AluJo SINE Alu -10 302 1 566 282 30 30 chr5 10100061 10100295 -189529855 - HAL1 LINE L1 -1026 1481 1248 308 306 145 30 chr5 10100373 10100828 -189529322 - L1ME LINE L1 -333 5829 5321 308 284 140 34 chr5 10101243 10101507 -189528643 - L1ME4a LINE L1 -71 6050 5759 276 295 33 16 chr5 10102071 10102193 -189527957 + MER104 DNA Tc2 1 124 -56 331 309 102 12 chr5 10102256 10102458 -189527692 + MLT1E LTR MaLR 1 220 -362 829 292 49 49 chr5 10102560 10102967 -189527183 + L1ME3A LINE L1 5723 6129 -41 3070 59 0 0 chr5 10103045 10103435 -189526715 - L1PA8 LINE L1 0 6172 5783 277 325 25 0 chr5 10103587 10103667 -189526483 - MIR SINE MIR -155 107 26 684 195 38 0 chr5 10104981 10105140 -189525010 - L1MB7 LINE L1 -9 6175 6011 762 257 30 10 chr5 10105365 10105669 -189524481 + L1ME2 LINE L1 2185 2494 -3652 605 147 16 24 chr5 10105690 10105932 -189524218 + L1MA7 LINE L1 5946 6291 0 2826 251 45 55 chr5 10105933 10107494 -189522656 + L1ME2 LINE L1 2490 4035 -2111 365 183 14 0 chr5 10107500 10107571 -189522579 + L1MC3 LINE L1 6878 6949 -836 1364 248 49 31 chr5 10107610 10108162 -189521988 + L1ME2 LINE L1 5584 6145 -19 189 0 0 0 chr5 10109600 10109621 -189520529 + (A)n Simple_repeat Simple_repeat 1 21 0 395 125 0 0 chr5 10109626 10109682 -189520468 - MLT1B LTR MaLR 0 390 335 * 990 237 5 0 chr5 10109681 10109900 -189520250 - MLT1B LTR MaLR -170 220 1 976 88 0 0 chr5 10109951 10110076 -189520074 + AluSg/x SINE Alu 174 298 -14 2116 118 0 7 chr5 10110163 10110459 -189519691 - AluSg SINE Alu -16 294 1 629 275 77 77 chr5 10110544 10111035 -189519115 + LTR33A LTR ERVL 31 521 -2 180 293 36 48 chr5 10111646 10111813 -189518337 - L2 LINE L2 -273 2999 2835 3383 139 46 56 chr5 10112101 10112726 -189517424 - LTR31 LTR ERV1 0 619 1 3660 200 35 4 chr5 10113120 10114041 -189516109 + MER45R DNA AcHobo 535 1483 -98 1013 189 0 0 chr5 10114107 10114276 -189515874 + AluSg/x SINE Alu 125 293 -19 1039 198 38 0 chr5 10114384 10114622 -189515528 - L1MA9 LINE L1 -36 6276 6030 * 2699 183 26 9 chr5 10114612 10115114 -189515036 + L1MA9 LINE L1 5424 5939 -373 273 57 0 0 chr5 10115114 10115149 -189515001 + (TAA)n Simple_repeat Simple_repeat 2 36 0 2699 183 26 9 chr5 10115149 10115230 -189514920 + L1MA9 LINE L1 5939 6017 -295 2397 149 3 3 chr5 10115676 10116051 -189514099 + THE1C LTR MaLR 1 375 0 387 0 0 0 chr5 10117213 10117256 -189512894 + (TG)n Simple_repeat Simple_repeat 2 44 0 290 89 0 54 chr5 10117609 10117665 -189512485 + (TTTTC)n Simple_repeat Simple_repeat 1 53 0 198 103 0 0 chr5 10117663 10117692 -189512458 + (TCCC)n Simple_repeat Simple_repeat 4 32 0 * 375 23 0 0 chr5 10117874 10117918 -189512232 + (TG)n Simple_repeat Simple_repeat 1 44 0 581 249 94 133 chr5 10118760 10119218 -189510932 - MLT1E LTR MaLR -105 549 110 413 252 119 13 chr5 10119235 10119386 -189510764 - MLT1E LTR MaLR -426 167 1 27 0 0 0 chr5 10119751 10119778 -189510372 + AT_rich Low_complexity Low_complexity 1 27 0 21 36 0 0 chr5 10121532 10121560 -189508590 + AT_rich Low_complexity Low_complexity 1 28 0 2107 136 3 0 chr5 10121721 10122031 -189508119 + AluSx SINE Alu 1 311 -1 204 295 33 0 chr5 10122286 10122347 -189507803 + MIR SINE MIR 92 154 -108 34 55 0 0 chr5 10122350 10122405 -189507745 + AT_rich Low_complexity Low_complexity 1 55 0 7023 211 33 10 chr5 10123234 10124917 -189505233 + L1MC3 LINE L1 5547 7273 -512 2209 119 48 20 chr5 10124917 10125269 -189504881 + THE1B LTR MaLR 1 362 -2 7023 211 33 10 chr5 10125269 10125323 -189504827 + L1MC3 LINE L1 7273 7324 -461 1200 198 31 0 chr5 10125344 10125634 -189504516 + L1MC3 LINE L1 6150 6339 -5 21 36 0 0 chr5 10125657 10125685 -189504465 + AT_rich Low_complexity Low_complexity 1 28 0 1517 246 54 67 chr5 10125704 10126032 -189504118 - L1M4 LINE L1 -1824 4322 3991 180 0 0 0 chr5 10126032 10126052 -189504098 + (TTTA)n Simple_repeat Simple_repeat 1 20 0 1517 246 54 67 chr5 10126052 10126488 -189503662 - L1M4 LINE L1 -2155 3991 3568 606 262 143 6 chr5 10127055 10127391 -189502759 - MER114 LTR ERV 0 648 267 537 187 16 82 chr5 10127425 10127607 -189502543 - MER114 LTR ERV -478 170 1 2173 123 7 3 chr5 10128237 10128546 -189501604 + AluSx SINE Alu 1 310 -2 301 321 92 16 chr5 10128844 10129028 -189501122 + L2 LINE L2 2513 2710 -604 229 339 0 0 chr5 10129820 10129885 -189500265 + MIR SINE MIR 41 105 -103 468 376 105 0 chr5 10130704 10130962 -189499188 + L3 LINE CR1 1280 1564 -13 844 253 65 11 chr5 10131050 10131311 -189498839 - MLT1F LTR MaLR -113 429 155 261 280 40 0 chr5 10131348 10131423 -189498727 - MLT1F LTR MaLR -464 78 1 1573 210 40 101 chr5 10131482 10132035 -189498115 + LTR40a LTR ERVL 1 519 0 2064 117 0 11 chr5 10132253 10132535 -189497615 + AluSg SINE Alu 32 310 0 252 270 8 79 chr5 10133284 10133410 -189496740 - MLT1F-int LTR MaLR -813 558 442 240 295 8 23 chr5 10133585 10133714 -189496436 - MLT1F-int LTR MaLR -1221 150 24 399 305 36 0 chr5 10133746 10133892 -189496258 + MLT1F LTR MaLR 133 280 -262 1056 286 48 45 chr5 10133949 10134488 -189495662 - MLT1F LTR MaLR 0 542 2 334 264 0 0 chr5 10134659 10134750 -189495400 + (TG)n Simple_repeat Simple_repeat 2 92 0 1237 211 8 0 chr5 10134789 10135055 -189495095 - L1MD3 LINE L1 0 7995 7728 344 335 133 47 chr5 10135735 10136308 -189493842 + L2 LINE L2 1548 2169 -1145 494 85 73 6 chr5 10136790 10136955 -189493195 + (TA)n Simple_repeat Simple_repeat 1 176 0 * 559 26 37 90 chr5 10136931 10137120 -189493030 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 643 91 50 14 chr5 10137145 10137364 -189492786 + (TA)n Simple_repeat Simple_repeat 1 227 0 329 261 11 22 chr5 10137368 10137460 -189492690 - L1MC4 LINE L1 -1339 6703 6613 194 258 237 10 chr5 10138500 10138597 -189491553 + L2 LINE L2 3152 3270 -2 1948 139 27 17 chr5 10138981 10139275 -189490875 + AluSx SINE Alu 1 297 -15 22 35 0 0 chr5 10139332 10139361 -189490789 + AT_rich Low_complexity Low_complexity 1 29 0 198 103 0 0 chr5 10141203 10141232 -189488918 + (TAA)n Simple_repeat Simple_repeat 2 30 0 379 325 41 47 chr5 10142520 10142689 -189487461 - L2 LINE L2 -2 3270 3103 241 269 156 25 chr5 10142736 10142896 -189487254 + MIR SINE MIR 48 228 -34 1675 214 33 28 chr5 10143207 10143437 -189486713 - MSTB1 LTR MaLR 0 432 198 2371 84 3 3 chr5 10143437 10143736 -189486414 - AluSq SINE Alu -14 299 1 1675 214 33 28 chr5 10143736 10143931 -189486219 - MSTB1 LTR MaLR -234 198 5 182 345 53 18 chr5 10145639 10145752 -189484398 + MIR SINE MIR 113 229 -33 1728 209 105 38 chr5 10146662 10147241 -189482909 + L1MB8 LINE L1 5271 5888 -290 1580 150 48 107 chr5 10149136 10149576 -189480574 + MLT2D LTR ERVL 1 414 0 202 344 0 33 chr5 10149973 10150124 -189480026 + C-rich Low_complexity Low_complexity 3 148 0 229 238 62 12 chr5 10151277 10151357 -189478793 - MER63 DNA MER1_type 0 1060 977 265 271 90 66 chr5 10151357 10151479 -189478671 - MER63 DNA MER1_type -310 750 2 278 194 14 0 chr5 10151549 10151621 -189478529 + GA-rich Low_complexity Low_complexity 1 73 0 2029 144 46 25 chr5 10151717 10152084 -189478066 + THE1C LTR MaLR 1 375 0 306 0 0 0 chr5 10153074 10153108 -189477042 + (CA)n Simple_repeat Simple_repeat 2 35 0 228 342 111 8 chr5 10153163 10153280 -189476870 - MIR SINE MIR -62 146 18 218 132 19 0 chr5 10153969 10154022 -189476128 + (CA)n Simple_repeat Simple_repeat 1 54 0 878 215 37 45 chr5 10155075 10155317 -189474833 + MLT1A1 LTR MaLR 1 240 -125 2828 59 6 0 chr5 10155754 10156110 -189474040 - L1PA7 LINE L1 -8 6146 5789 3963 65 23 7 chr5 10156110 10156747 -189473403 + L1PA7 LINE L1 5146 5789 -365 392 263 3 3 chr5 10156841 10156971 -189473179 + MLT1B LTR MaLR 304 390 0 197 86 57 0 chr5 10157192 10157227 -189472923 + (TAGA)n Simple_repeat Simple_repeat 1 37 0 272 212 30 20 chr5 10157262 10157361 -189472789 + (TTATA)n Simple_repeat Simple_repeat 5 104 0 413 338 44 44 chr5 10157783 10157831 -189472319 - L1M4 LINE L1 -2286 3860 3813 1555 180 47 68 chr5 10157831 10157904 -189472246 - LTR52 LTR ERVL -2 419 346 261 0 0 0 chr5 10157904 10157933 -189472217 + (CA)n Simple_repeat Simple_repeat 2 30 0 1555 180 47 68 chr5 10157933 10158287 -189471863 - LTR52 LTR ERVL -75 346 1 413 338 44 44 chr5 10158287 10158555 -189471595 - L1M4 LINE L1 -2332 3814 3544 229 300 0 12 chr5 10158637 10158717 -189471433 + (TA)n Simple_repeat Simple_repeat 2 80 0 312 242 10 99 chr5 10158818 10158918 -189471232 + MIR SINE MIR 59 142 -120 2215 225 87 21 chr5 10158918 10159527 -189470623 - MLT1E1 LTR MaLR -1 653 5 312 242 10 99 chr5 10159527 10159588 -189470562 + MIR SINE MIR 142 207 -55 251 273 107 9 chr5 10160694 10160809 -189469341 - MIR SINE MIR -70 138 31 225 65 0 0 chr5 10161693 10161724 -189468426 + (GA)n Simple_repeat Simple_repeat 2 32 0 224 167 21 0 chr5 10161740 10161788 -189468362 + (TA)n Simple_repeat Simple_repeat 2 50 0 1363 221 41 67 chr5 10161930 10162095 -189468055 + MER67C LTR ERV1 1 169 -345 2205 140 68 33 chr5 10162095 10162523 -189467627 + MER65A LTR ERV1 1 443 -2 1363 221 41 67 chr5 10162523 10162911 -189467239 + MER67C LTR ERV1 169 506 -8 255 308 51 92 chr5 10164406 10164512 -189465638 - MLT1K LTR MaLR -398 190 94 417 243 27 18 chr5 10164512 10164623 -189465527 - MER81 DNA DNA -2 112 1 255 308 51 92 chr5 10164623 10164711 -189465439 - MLT1K LTR MaLR -494 94 4 21 82 0 0 chr5 10164793 10164842 -189465308 + AT_rich Low_complexity Low_complexity 1 49 0 4697 193 10 8 chr5 10166407 10167324 -189462826 + MER49 LTR ERV1 5 923 0 1809 227 45 16 chr5 10167437 10167882 -189462268 + MLT1C LTR MaLR 1 458 -9 1288 145 94 86 chr5 10168851 10169223 -189460927 + THE1C LTR MaLR 1 375 0 492 219 41 41 chr5 10169887 10170056 -189460094 - MER89 LTR ERV1 -390 169 1 1230 260 38 30 chr5 10172017 10172544 -189457606 - L1M4 LINE L1 -822 5324 4794 1017 216 155 4 chr5 10173784 10174048 -189456102 + MLT2D LTR ERVL 92 395 -19 232 182 23 0 chr5 10174079 10174123 -189456027 + MLT2D LTR ERVL 510 554 0 452 312 144 10 chr5 10174127 10174425 -189455725 + LTR16A LTR ERVL 25 362 -88 844 61 0 0 chr5 10175381 10175495 -189454655 - L1PA4 LINE L1 0 6155 6042 772 227 62 27 chr5 10176953 10177213 -189452937 + L1MA9 LINE L1 5961 6229 -83 478 78 0 111 chr5 10177213 10177263 -189452887 - MADE1 DNA Mariner 0 80 43 1018 52 22 0 chr5 10177263 10177398 -189452752 + L1PA4 LINE L1 6017 6154 -1 478 78 0 111 chr5 10177398 10177437 -189452713 - MADE1 DNA Mariner -37 43 1 284 75 0 0 chr5 10177437 10177477 -189452673 + L1MA9 LINE L1 6234 6273 -39 1929 187 37 8 chr5 10177515 10177894 -189452256 + MLT1B LTR MaLR 1 390 0 23 54 0 0 chr5 10178065 10178102 -189452048 + AT_rich Low_complexity Low_complexity 1 37 0 203 208 0 19 chr5 10179511 10179564 -189450586 + (TTAAA)n Simple_repeat Simple_repeat 5 56 0 25 31 0 0 chr5 10179872 10179904 -189450246 + AT_rich Low_complexity Low_complexity 1 32 0 1936 223 31 119 chr5 10180011 10180773 -189449377 - L1MA6 LINE L1 -182 6118 5424 1578 180 20 8 chr5 10180767 10181178 -189448972 + L1MA6 LINE L1 5008 5423 -743 * 1447 39 6 0 chr5 10182435 10182613 -189447537 + L1PA4 LINE L1 5975 6153 -2 197 392 108 0 chr5 10183125 10183255 -189446895 - L2 LINE L2 -2 3270 3127 2248 183 48 101 chr5 10183428 10183481 -189446669 - MLT2B3 LTR ERVL 0 554 500 416 51 17 0 chr5 10183481 10183540 -189446610 + (TAGA)n Simple_repeat Simple_repeat 1 60 0 2248 183 48 101 chr5 10183540 10183946 -189446204 - MLT2B3 LTR ERVL -54 500 74 1118 67 11 11 chr5 10183946 10184126 -189446024 + (CA)n Simple_repeat Simple_repeat 1 180 0 2248 183 48 101 chr5 10184126 10184173 -189445977 - MLT2B3 LTR ERVL -480 74 78 1106 71 0 22 chr5 10184173 10184356 -189445794 + (CA)n Simple_repeat Simple_repeat 2 180 0 2248 183 48 101 chr5 10184356 10184431 -189445719 - MLT2B3 LTR ERVL -475 79 2 264 318 35 0 chr5 10184443 10184528 -189445622 - MIR SINE MIR -127 135 48 3714 52 2 0 chr5 10185406 10185871 -189444279 + L1PA5 LINE L1 5684 6149 -5 2831 124 16 2 chr5 10185951 10186404 -189443746 - L1PA15 LINE L1 -2 6163 5705 668 150 53 0 chr5 10186404 10186517 -189443633 + L1PA15 LINE L1 5558 5676 -489 2116 80 0 0 chr5 10190573 10190849 -189439301 + AluY SINE Alu 32 307 -4 274 261 0 0 chr5 10192155 10192220 -189437930 + L1MB7 LINE L1 17 81 -6461 * 374 229 28 50 chr5 10192205 10192384 -189437766 + L1MB7 LINE L1 3741 3915 -2729 513 220 97 113 chr5 10192384 10192640 -189437510 + MLT1D LTR MaLR 1 271 -196 2192 207 47 11 chr5 10192640 10193176 -189436974 + L1MB7 LINE L1 6058 6612 -70 4042 190 23 8 chr5 10193199 10194282 -189435868 - L1PB4 LINE L1 -109 6047 4953 1080 228 30 0 chr5 10194285 10194522 -189435628 + L1PB4 LINE L1 4712 4955 -1191 256 247 78 13 chr5 10194801 10194878 -189435272 + MIR SINE MIR 31 112 -150 2130 151 81 3 chr5 10194882 10195265 -189434885 + MLT2C2 LTR ERVL 4 416 -48 288 0 0 0 chr5 10195276 10195308 -189434842 + (TG)n Simple_repeat Simple_repeat 1 32 0 1696 148 22 94 chr5 10196366 10196590 -189433560 - THE1C LTR MaLR 0 375 191 2080 130 3 0 chr5 10196590 10196890 -189433260 + AluSq SINE Alu 1 301 -12 1696 148 22 94 chr5 10196890 10197069 -189433081 - THE1C LTR MaLR -184 191 1 3435 118 84 16 chr5 10197375 10197925 -189432225 + LTR18B LTR ERVL 1 587 -27 2205 170 29 12 chr5 10198742 10198769 -189431381 - MSTA LTR MaLR 0 428 403 15867 66 3 9 chr5 10198769 10201661 -189428489 + L1PA6 LINE L1 3246 6154 0 2205 170 29 12 chr5 10201661 10202051 -189428099 - MSTA LTR MaLR -25 403 4 4825 165 14 19 chr5 10202053 10203045 -189427105 - L1PA16 LINE L1 -29 6137 5151 32 26 0 0 chr5 10203529 10203568 -189426582 + AT_rich Low_complexity Low_complexity 1 39 0 390 344 59 43 chr5 10204322 10204697 -189425453 + L1MC/D LINE L1 5428 5808 -2000 256 236 18 0 chr5 10204817 10204927 -189425223 + (TA)n Simple_repeat Simple_repeat 1 112 0 200 294 0 16 chr5 10205110 10205236 -189424914 + (TATG)n Simple_repeat Simple_repeat 1 124 0 320 266 11 57 chr5 10205244 10205421 -189424729 - L1M4 LINE L1 -2291 3855 3687 1520 235 11 16 chr5 10206300 10206678 -189423472 - L1MD1 LINE L1 -127 6115 5740 468 323 22 36 chr5 10207654 10207877 -189422273 - MIR SINE MIR -38 224 5 224 333 15 68 chr5 10208094 10208226 -189421924 + L2 LINE L2 3148 3272 0 235 258 21 86 chr5 10208504 10208597 -189421553 - L2 LINE L2 -17 3255 3169 296 309 103 7 chr5 10208629 10208765 -189421385 + MIR SINE MIR 53 201 -61 1675 215 67 0 chr5 10208895 10209341 -189420809 + L1PA16 LINE L1 4888 5363 -783 588 107 0 0 chr5 10209345 10209429 -189420721 + AluS SINE Alu 1 84 -228 4055 127 43 1 chr5 10209429 10210168 -189419982 + L1PA16 LINE L1 5355 6163 0 24 0 0 0 chr5 10211300 10211324 -189418826 + AT_rich Low_complexity Low_complexity 1 24 0 234 227 61 0 chr5 10211425 10211491 -189418659 + MER5B DNA MER1_type 109 178 0 1905 114 54 14 chr5 10212165 10212462 -189417688 + AluSc SINE Alu 1 309 0 1076 161 0 0 chr5 10212490 10212652 -189417498 + AluSg/x SINE Alu 137 298 -14 2258 64 16 13 chr5 10214103 10214417 -189415733 + L1PA5 LINE L1 5839 6153 -1 844 220 38 19 chr5 10214622 10214831 -189415319 - MER20 DNA MER1_type 0 219 7 180 300 20 0 chr5 10215297 10215347 -189414803 - MIR SINE MIR -204 58 8 231 308 57 6 chr5 10215461 10215620 -189414530 - L1M4 LINE L1 -1446 4700 4534 26 93 0 0 chr5 10216774 10216849 -189413301 + AT_rich Low_complexity Low_complexity 1 75 0 1196 213 84 58 chr5 10216878 10217258 -189412892 - MLT1B LTR MaLR 0 390 1 21 0 0 0 chr5 10217323 10217344 -189412806 + AT_rich Low_complexity Low_complexity 1 21 0 303 204 151 11 chr5 10217954 10218047 -189412103 + L2 LINE L2 1878 1983 -1331 2449 71 0 3 chr5 10218053 10218361 -189411789 - AluY SINE Alu -2 309 3 1076 76 0 0 chr5 10218363 10218495 -189411655 - AluY SINE Alu -177 134 3 860 351 114 24 chr5 10218501 10218642 -189411508 + L2 LINE L2 1989 2116 -1197 270 0 0 0 chr5 10218642 10218672 -189411478 + (TTG)n Simple_repeat Simple_repeat 2 31 0 860 351 114 24 chr5 10218672 10219713 -189410437 + L2 LINE L2 2116 3278 -35 423 342 53 22 chr5 10219721 10219946 -189410204 - MIR SINE MIR -3 259 28 248 28 56 0 chr5 10219951 10219987 -189410163 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 292 146 135 67 chr5 10220993 10221082 -189409068 - L1PA16 LINE L1 0 6166 6072 23 0 0 0 chr5 10221301 10221324 -189408826 + AT_rich Low_complexity Low_complexity 1 23 0 26 30 0 0 chr5 10221361 10221394 -189408756 + AT_rich Low_complexity Low_complexity 1 33 0 30 45 0 0 chr5 10222393 10222437 -189407713 + AT_rich Low_complexity Low_complexity 1 44 0 22 56 0 0 chr5 10222556 10222592 -189407558 + AT_rich Low_complexity Low_complexity 1 36 0 210 71 0 0 chr5 10223554 10223582 -189406568 + (TA)n Simple_repeat Simple_repeat 2 29 0 315 320 135 38 chr5 10225119 10225820 -189404330 - L2 LINE L2 -10 3262 2469 210 240 40 0 chr5 10225834 10225884 -189404266 - MER91 DNA MER1_type -14 126 75 223 343 33 47 chr5 10226435 10226648 -189403502 - L2 LINE L2 -1412 1902 1693 1317 216 65 23 chr5 10227475 10227826 -189402324 + MLT1A2 LTR MaLR 5 370 -4 603 234 21 0 chr5 10227898 10228039 -189402111 - MER20 DNA MER1_type 0 219 76 219 88 0 0 chr5 10228259 10228293 -189401857 + (CAAAAA)n Simple_repeat Simple_repeat 2 35 0 203 152 22 0 chr5 10229131 10229177 -189400973 + CT-rich Low_complexity Low_complexity 1 47 0 255 244 139 23 chr5 10229193 10229279 -189400871 + L2 LINE L2 3203 3298 -15 566 261 6 28 chr5 10229504 10229680 -189400470 + L1MD2 LINE L1 5826 5997 -362 587 275 17 78 chr5 10229698 10229993 -189400157 + L1MD2 LINE L1 6070 6346 -13 2126 161 131 47 chr5 10230853 10231363 -189398787 + MLT2B3 LTR ERVL 1 553 -1 2544 248 61 24 chr5 10231363 10231590 -189398560 + ERVL-B3 LTR ERVL 4 221 -5264 1824 229 46 64 chr5 10231590 10232154 -189397996 + MLT2B3 LTR ERVL 1 554 0 2544 248 61 24 chr5 10232154 10232167 -189397983 + ERVL-B3 LTR ERVL 221 232 -5253 2102 191 33 5 chr5 10232167 10232587 -189397563 + MSTB1 LTR MaLR 1 432 0 2544 248 61 24 chr5 10232587 10233077 -189397073 + ERVL-B3 LTR ERVL 232 731 -4754 537 82 0 0 chr5 10233084 10233157 -189396993 + L1PA13 LINE L1 6083 6155 -8 3432 208 38 5 chr5 10233158 10234483 -189395667 + ERVL-B3 LTR ERVL 996 2405 -3359 565 221 17 88 chr5 10234483 10234664 -189395486 - MER68 LTR ERV1 -365 197 30 510 85 0 24 chr5 10235436 10235518 -189394632 - L1PA6 LINE L1 0 6154 6075 3956 226 13 41 chr5 10235647 10236662 -189393488 + MER45B DNA AcHobo 1 986 -54 2150 151 70 51 chr5 10236666 10237097 -189393053 + ERVL-B3 LTR ERVL 2402 2840 -2924 * 2278 168 5 10 chr5 10237095 10237488 -189392662 + ERVL LTR ERVL 5039 5429 -335 1731 249 35 5 chr5 10237609 10238039 -189392111 + MER68 LTR ERV1 120 562 0 240 319 83 56 chr5 10238268 10238412 -189391738 + L2 LINE L2 2608 2755 -559 246 169 89 81 chr5 10239654 10239778 -189390372 + MER54B LTR ERVL 339 463 -330 21 57 0 0 chr5 10240938 10240973 -189389177 + AT_rich Low_complexity Low_complexity 1 35 0 22 70 0 0 chr5 10241106 10241149 -189389001 + AT_rich Low_complexity Low_complexity 1 43 0 3441 309 83 28 chr5 10241197 10241937 -189388213 - L2 LINE L2 -498 2816 2118 1732 181 40 27 chr5 10241937 10242307 -189387843 - THE1C LTR MaLR 0 375 1 3441 309 83 28 chr5 10242307 10242856 -189387294 - L2 LINE L2 -1196 2118 1420 1993 140 46 6 chr5 10242856 10243206 -189386944 + THE1B LTR MaLR 1 364 0 3441 309 83 28 chr5 10243206 10243512 -189386638 - L2 LINE L2 -1894 1420 1132 422 326 77 11 chr5 10245446 10245964 -189384186 - MLT1G1 LTR MaLR -2 588 5 4512 176 37 11 chr5 10246351 10246727 -189383423 - L1PB4 LINE L1 -3 6153 5788 184 59 59 0 chr5 10246727 10246761 -189383389 + (TA)n Simple_repeat Simple_repeat 1 36 0 4512 176 37 11 chr5 10246761 10247442 -189382708 - L1PB4 LINE L1 -368 5788 5068 1560 211 6 3 chr5 10247445 10247782 -189382368 + L1 LINE L1 4697 5034 -1112 26 88 0 0 chr5 10249134 10249202 -189380948 + AT_rich Low_complexity Low_complexity 1 68 0 188 342 72 18 chr5 10250342 10250453 -189379697 + MIR3 SINE MIR 79 195 -13 1476 257 31 21 chr5 10250619 10251230 -189378920 - L1M4 LINE L1 -3025 3121 2505 23 33 0 0 chr5 10251923 10251953 -189378197 + AT_rich Low_complexity Low_complexity 1 30 0 512 312 23 23 chr5 10252852 10253067 -189377083 + MIR SINE MIR 48 262 0 22 0 0 0 chr5 10253459 10253481 -189376669 + AT_rich Low_complexity Low_complexity 1 22 0 546 169 0 0 chr5 10253502 10253591 -189376559 - MSTB1 LTR MaLR -50 382 294 2023 141 0 0 chr5 10253617 10253900 -189376250 + AluSx SINE Alu 1 283 -29 484 15 31 0 chr5 10254098 10254163 -189375987 + (TAGA)n Simple_repeat Simple_repeat 4 70 0 1678 99 13 115 chr5 10254981 10255321 -189374829 + AluSx SINE Alu 1 308 0 442 329 103 26 chr5 10255468 10255778 -189374372 + L2 LINE L2 2976 3309 -4 2670 240 68 22 chr5 10255949 10256802 -189373348 - L1ME1 LINE L1 -5 6161 5270 387 264 54 0 chr5 10256825 10256954 -189373196 - L1ME1 LINE L1 -992 5154 5019 2068 224 154 8 chr5 10257279 10257878 -189372272 - MER76 LTR ERV -1 687 2 1264 226 25 14 chr5 10258621 10258900 -189371250 + AluJo SINE Alu 1 282 -30 309 26 0 0 chr5 10258904 10258942 -189371208 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 888 58 0 16 chr5 10260317 10260438 -189369712 + L1PA6 LINE L1 6036 6154 0 2131 65 25 11 chr5 10261489 10261765 -189368385 + AluY SINE Alu 15 294 -17 180 0 0 0 chr5 10263245 10263265 -189366885 + (A)n Simple_repeat Simple_repeat 1 20 0 221 297 116 43 chr5 10264231 10264369 -189365781 + MIR SINE MIR 66 213 -49 22 0 0 0 chr5 10265693 10265715 -189364435 + AT_rich Low_complexity Low_complexity 1 22 0 8527 36 1 1 chr5 10266310 10268094 -189362056 + L1PA5 LINE L1 4358 6141 -13 2541 58 9 6 chr5 10268690 10269017 -189361133 + L1PA7 LINE L1 5822 6149 -5 1869 291 25 32 chr5 10269824 10270547 -189359603 - L1MEc LINE L1 -5643 753 36 2670 51 0 0 chr5 10271257 10271568 -189358582 - AluY SINE Alu 0 311 1 1605 142 103 14 chr5 10272023 10272304 -189357846 + AluSx SINE Alu 1 306 -6 418 263 10 0 chr5 10272616 10272715 -189357435 - MLT2E LTR ERVL -476 152 53 2142 120 10 98 chr5 10273530 10273929 -189356221 + THE1B LTR MaLR 1 364 0 360 265 63 63 chr5 10276940 10277129 -189353021 - L1MEd LINE L1 -4678 1728 1540 1944 118 11 0 chr5 10277158 10277430 -189352720 - AluSx SINE Alu -37 275 1 243 110 64 18 chr5 10277598 10277707 -189352443 + (TA)n Simple_repeat Simple_repeat 1 114 0 387 292 42 28 chr5 10277711 10277938 -189352212 - L1MEd LINE L1 -5004 1392 1152 235 189 19 0 chr5 10277987 10278040 -189352110 - L1PA16 LINE L1 0 6166 6113 2971 116 32 26 chr5 10278043 10278461 -189351689 - L1P4 LINE L1 -407 5758 5332 1768 102 87 26 chr5 10278461 10278747 -189351403 - AluSp SINE Alu 0 306 5 2971 116 32 26 chr5 10278747 10278868 -189351282 - L1P4 LINE L1 -833 5332 5213 26 30 0 0 chr5 10278881 10278914 -189351236 + AT_rich Low_complexity Low_complexity 1 33 0 299 279 60 67 chr5 10280053 10280322 -189349828 - MLT1J LTR MaLR -2 509 243 6942 26 1 1 chr5 10281298 10282114 -189348036 - L1PA4 LINE L1 -1 6154 5339 6547 41 5 0 chr5 10282109 10282917 -189347233 + L1PA4 LINE L1 4515 5326 -820 * 1216 221 12 24 chr5 10283082 10283335 -189346815 - Tigger3(Golem) DNA MER2_type -2778 251 2 22 0 0 0 chr5 10284184 10284206 -189345944 + AT_rich Low_complexity Low_complexity 1 22 0 186 333 30 0 chr5 10284208 10284274 -189345876 + L2 LINE L2 3205 3272 0 1836 132 92 7 chr5 10284649 10284930 -189345220 - AluSx SINE Alu -6 306 2 318 294 55 14 chr5 10285176 10285322 -189344828 - MLT1I LTR MaLR 0 409 258 255 223 160 11 chr5 10285588 10285682 -189344468 + MIR SINE MIR 137 244 -18 2175 225 89 20 chr5 10285734 10286395 -189343755 - Tigger7 DNA MER2_type -14 2573 1 222 304 0 0 chr5 10286395 10286507 -189343643 + (TAG)n Simple_repeat Simple_repeat 1 112 0 507 260 0 0 chr5 10286531 10286708 -189343442 + (TAG)n Simple_repeat Simple_repeat 2 178 0 354 316 14 29 chr5 10287000 10287139 -189343011 + MIR SINE MIR 107 243 -19 620 224 162 25 chr5 10287405 10287862 -189342288 - L1M LINE L1 -752 5394 4899 303 353 22 0 chr5 10288142 10288281 -189341869 - L1ME LINE L1 -453 5668 5527 2406 83 0 16 chr5 10288935 10289247 -189340903 + AluSp SINE Alu 1 307 -6 827 317 53 36 chr5 10290413 10290886 -189339264 - MLT1H LTR MaLR -54 495 15 1758 175 25 22 chr5 10292620 10292986 -189337164 + THE1C LTR MaLR 5 371 -4 198 261 171 27 chr5 10293151 10293262 -189336888 + L3 LINE CR1 1188 1314 -263 1329 223 62 30 chr5 10293296 10293508 -189336642 - MLT1B LTR MaLR 0 390 159 2186 100 7 16 chr5 10293508 10293817 -189336333 - AluSc SINE Alu -3 306 1 1329 223 62 30 chr5 10293817 10293977 -189336173 - MLT1B LTR MaLR -231 159 6 253 88 0 0 chr5 10295768 10295802 -189334348 + (GA)n Simple_repeat Simple_repeat 2 35 0 558 240 0 0 chr5 10295803 10295953 -189334197 + GA-rich Low_complexity Low_complexity 3 152 0 243 0 0 0 chr5 10297148 10297175 -189332975 + (CA)n Simple_repeat Simple_repeat 2 28 0 231 146 0 0 chr5 10297246 10297287 -189332863 + (CA)n Simple_repeat Simple_repeat 2 42 0 22 0 0 0 chr5 10298759 10298781 -189331369 + AT_rich Low_complexity Low_complexity 1 22 0 43376 46 4 1 chr5 10299708 10305855 -189324295 + L1PA4 LINE L1 1 6165 0 729 318 108 31 chr5 10306541 10307057 -189323093 - L2 LINE L2 -1002 2312 1757 245 247 0 13 chr5 10307114 10307191 -189322959 + (CATATA)n Simple_repeat Simple_repeat 5 80 0 12950 58 10 12 chr5 10307194 10309123 -189321027 - HERVL LTR ERVL -344 5310 3368 2516 89 10 79 chr5 10309791 10310196 -189319954 - MER51B LTR ERV1 0 377 1 23 33 0 0 chr5 10310215 10310245 -189319905 + AT_rich Low_complexity Low_complexity 1 30 0 328 317 36 48 chr5 10310616 10310825 -189319325 + MIR SINE MIR 42 252 -10 1426 227 51 17 chr5 10311398 10311643 -189318507 - MLT1A1 LTR MaLR 0 365 103 2233 116 33 25 chr5 10311643 10312004 -189318146 + THE1B LTR MaLR 1 364 0 1426 227 51 17 chr5 10312004 10312111 -189318039 - MLT1A1 LTR MaLR -262 103 1 22 35 0 0 chr5 10312609 10312638 -189317512 + AT_rich Low_complexity Low_complexity 1 29 0 1333 192 73 0 chr5 10312871 10313173 -189316977 - L1MC1 LINE L1 -2 6331 6008 5662 26 0 0 chr5 10313476 10314177 -189315973 - L1PA3 LINE L1 -1303 4843 4143 7550 28 3 0 chr5 10314177 10315556 -189314594 + L1PA3 LINE L1 4818 6155 0 220 156 44 0 chr5 10316579 10316624 -189313526 + CT-rich Low_complexity Low_complexity 2 48 0 1089 226 8 25 chr5 10317118 10317357 -189312793 - AluJo SINE Alu -13 299 65 2080 131 0 0 chr5 10317444 10317741 -189312409 - AluSx SINE Alu -15 297 1 11187 23 0 0 chr5 10318264 10319635 -189310515 - L1P LINE L1 -1421 4725 3355 3981 0 0 0 chr5 10319636 10320096 -189310054 + L1HS LINE L1 5696 6155 0 244 36 0 125 chr5 10320096 10320152 -189309998 + (A)n Simple_repeat Simple_repeat 1 49 0 2290 210 56 26 chr5 10320594 10321237 -189308913 + L1MC3 LINE L1 6813 7474 -311 2265 189 8 8 chr5 10321236 10321733 -189308417 - L1PA15 LINE L1 -1052 5094 4598 * 4868 148 29 22 chr5 10321742 10322795 -189307355 + L1PA15 LINE L1 5104 6161 -4 742 195 52 108 chr5 10322828 10323172 -189306978 + L1MC3 LINE L1 7461 7785 0 480 273 18 0 chr5 10323349 10323459 -189306691 - MER5B DNA MER1_type -60 118 7 181 402 0 12 chr5 10323510 10323592 -189306558 + MER5A DNA MER1_type 7 87 -102 343 278 56 9 chr5 10323773 10323881 -189306269 - MIR SINE MIR -73 189 77 195 42 0 0 chr5 10323913 10323937 -189306213 + (CA)n Simple_repeat Simple_repeat 1 24 0 1019 161 62 45 chr5 10323955 10324198 -189305952 + MER2 DNA MER2_type 48 294 -51 488 172 66 0 chr5 10325186 10325308 -189304842 - L1MA7 LINE L1 0 6291 6162 2500 66 0 0 chr5 10325362 10325665 -189304485 - AluY SINE Alu -8 303 1 213 219 0 0 chr5 10325990 10326063 -189304087 + (TG)n Simple_repeat Simple_repeat 1 73 0 1339 233 23 19 chr5 10326128 10326555 -189303595 + MLT2B1 LTR ERVL 1 478 -42 414 196 14 14 chr5 10326555 10326703 -189303447 + (TCTA)n Simple_repeat Simple_repeat 4 151 0 215 180 33 0 chr5 10326718 10326779 -189303371 + (TCTA)n Simple_repeat Simple_repeat 4 66 0 354 143 0 0 chr5 10326786 10326849 -189303301 + MLT2B1 LTR ERVL 458 520 0 3426 104 40 2 chr5 10327611 10328132 -189302018 - L1PA13 LINE L1 -5 6158 5618 1319 219 45 31 chr5 10328357 10328717 -189301433 + MLT1A2 LTR MaLR 5 462 -5 206 297 36 9 chr5 10328850 10328961 -189301189 + CT-rich Low_complexity Low_complexity 5 118 0 1863 132 76 20 chr5 10329130 10329485 -189300665 + THE1C LTR MaLR 1 375 0 8384 141 54 27 chr5 10329485 10330056 -189300094 + THE1B-int LTR MaLR 1 556 -1024 2131 127 11 50 chr5 10330056 10330435 -189299715 + THE1B LTR MaLR 1 364 0 10538 125 11 2 chr5 10330435 10332000 -189298150 + THE1B-int LTR MaLR 1 1580 0 2047 156 11 32 chr5 10332000 10332372 -189297778 + THE1B LTR MaLR 1 364 0 8384 141 54 27 chr5 10332372 10333329 -189296821 + THE1B-int LTR MaLR 555 1571 -9 1199 140 82 27 chr5 10333329 10333586 -189296564 + THE1C LTR MaLR 105 375 0 423 312 84 5 chr5 10333590 10333792 -189296358 + MIR SINE MIR 34 251 -11 26 50 0 0 chr5 10333811 10333851 -189296299 + AT_rich Low_complexity Low_complexity 1 40 0 1637 172 22 0 chr5 10333861 10334171 -189295979 - AluSx SINE Alu 0 319 4 4922 55 19 0 chr5 10334259 10334880 -189295270 - L1PA8 LINE L1 -4 6168 5536 2344 111 13 21 chr5 10335168 10335546 -189294604 - THE1C LTR MaLR 0 375 1 322 245 6 6 chr5 10335627 10335790 -189294360 + (TA)n Simple_repeat Simple_repeat 1 163 0 263 28 28 0 chr5 10335854 10335890 -189294260 + (TCTA)n Simple_repeat Simple_repeat 4 40 0 949 152 81 113 chr5 10335915 10336224 -189293926 + AluJo SINE Alu 2 300 -2 22 0 0 0 chr5 10337122 10337144 -189293006 + AT_rich Low_complexity Low_complexity 1 22 0 1190 213 55 22 chr5 10339473 10339866 -189290284 - MER54B LTR ERVL 0 793 488 934 266 145 0 chr5 10340632 10340921 -189289229 + LTR40a LTR ERVL 2 332 -187 21 36 0 0 chr5 10340939 10340967 -189289183 + AT_rich Low_complexity Low_complexity 1 28 0 242 328 158 28 chr5 10341028 10341275 -189288875 + L3 LINE CR1 1291 1569 -8 238 237 53 0 chr5 10341589 10341665 -189288485 + L1ME1 LINE L1 6064 6143 -23 2077 140 0 0 chr5 10341742 10342050 -189288100 + AluSx SINE Alu 4 311 -1 194 380 87 39 chr5 10342367 10342596 -189287554 - MIR SINE MIR -15 247 8 1871 17 13 0 chr5 10344343 10344576 -189285574 + L1PA4 LINE L1 4203 4438 -1708 * 7225 21 0 3 chr5 10344574 10345786 -189284364 + L1PA4 LINE L1 4927 6135 -20 252 0 0 0 chr5 10345790 10345818 -189284332 + (TAA)n Simple_repeat Simple_repeat 3 30 0 2045 105 24 14 chr5 10346250 10346545 -189283605 - AluSx SINE Alu -4 308 11 2276 108 7 0 chr5 10347065 10347371 -189282779 - AluSg SINE Alu -2 308 1 536 368 51 21 chr5 10347934 10348646 -189281504 - L2 LINE L2 -220 3093 2361 393 312 162 34 chr5 10348702 10349328 -189280822 + L2 LINE L2 2462 3176 -137 190 308 0 19 chr5 10349455 10349507 -189280643 + L2 LINE L2 3207 3257 -15 805 217 76 38 chr5 10351148 10351509 -189278641 + Zaphod DNA AcHobo 511 896 -3135 2098 127 0 16 chr5 10351509 10351823 -189278327 - AluSx SINE Alu -3 309 1 805 217 76 38 chr5 10351823 10351935 -189278215 + Zaphod DNA AcHobo 896 1002 -3029 453 226 21 153 chr5 10352056 10352210 -189277940 + Zaphod DNA AcHobo 3735 3821 -210 1469 186 116 3 chr5 10352210 10352537 -189277613 - MLT1A1 LTR MaLR -1 364 1 453 226 21 153 chr5 10352537 10352722 -189277428 + Zaphod DNA AcHobo 3821 4029 -2 266 321 50 25 chr5 10353105 10353264 -189276886 + MIR SINE MIR 90 252 -10 3082 73 7 0 chr5 10353315 10353726 -189276424 - L1PA7 LINE L1 -1 6153 5740 347 281 79 26 chr5 10354324 10354438 -189275712 - L2 LINE L2 -1 3312 3193 1900 198 8 6 chr5 10354705 10355069 -189275081 + MLT1A1 LTR MaLR 1 365 0 705 196 23 6 chr5 10355536 10355862 -189274288 + CT-rich Low_complexity Low_complexity 1 331 0 941 166 0 143 chr5 10355864 10356087 -189274063 - AluJb SINE Alu -38 274 84 367 270 85 18 chr5 10356713 10356878 -189273272 - MLT1H LTR MaLR -339 210 57 364 112 45 79 chr5 10358266 10358355 -189271795 + L1MA7 LINE L1 6206 6291 0 301 194 56 56 chr5 10358363 10358471 -189271679 + L1MC/D LINE L1 5705 5812 -309 585 178 23 11 chr5 10359385 10359559 -189270591 + CT-rich Low_complexity Low_complexity 1 176 0 1919 148 7 3 chr5 10359639 10359949 -189270201 + AluSx SINE Alu 1 311 -1 300 294 96 7 chr5 10360168 10360314 -189269836 - HAL1 LINE L1 -2304 203 45 379 335 62 52 chr5 10361484 10361809 -189268341 + L1MEd LINE L1 1011 1338 -5078 1098 280 97 42 chr5 10361845 10362363 -189267787 - MLT1G LTR MaLR -11 579 34 505 303 104 66 chr5 10362415 10363017 -189267133 + L1MEd LINE L1 1203 2028 -4579 2632 137 24 9 chr5 10363126 10363548 -189266602 + MSTA LTR MaLR 1 428 0 2086 205 42 34 chr5 10365591 10365797 -189264353 - L1MA9 LINE L1 -323 5989 5786 249 83 0 0 chr5 10365797 10365833 -189264317 + (CA)n Simple_repeat Simple_repeat 2 37 0 2086 205 42 34 chr5 10365833 10366123 -189264027 - L1MA9 LINE L1 -526 5786 5489 966 253 98 7 chr5 10366126 10366431 -189263719 + L1 LINE L1 3898 4230 -1916 810 215 48 16 chr5 10366718 10366904 -189263246 - MER20 DNA MER1_type 0 219 28 233 222 19 19 chr5 10367302 10367356 -189262794 + L1M3c LINE L1 2 55 -6086 482 343 0 52 chr5 10367540 10367951 -189262199 + L1M3c LINE L1 50 493 -5638 228 349 0 15 chr5 10368140 10368206 -189261944 + L1M3de LINE L1 280 344 -6309 232 246 46 62 chr5 10368244 10368309 -189261841 + L1M3de LINE L1 927 990 -5663 254 309 52 10 chr5 10368339 10368436 -189261714 + L1M3de LINE L1 915 1015 -5638 259 306 47 12 chr5 10368454 10368539 -189261611 + L1 LINE L1 278 365 -6288 4105 280 34 26 chr5 10368568 10370131 -189260019 + L1 LINE L1 935 2137 -4516 4711 241 70 14 chr5 10370265 10372123 -189258027 + L1MC/D LINE L1 2074 4324 -2058 1008 94 29 0 chr5 10372123 10372293 -189257857 + GA-rich Low_complexity Low_complexity 1 175 0 4711 241 70 14 chr5 10372293 10373502 -189256648 + L1MC/D LINE L1 4324 5464 -918 402 197 0 0 chr5 10373522 10373593 -189256557 + MER2 DNA MER2_type 31 101 -244 5839 234 13 2 chr5 10373594 10375032 -189255118 - L1 LINE L1 -2271 4461 3008 2338 201 2 16 chr5 10375048 10375565 -189254585 + L1 LINE L1 4494 5003 -1729 1842 165 73 3 chr5 10375565 10375905 -189254245 + THE1B LTR MaLR 1 364 0 6542 127 10 52 chr5 10375905 10377005 -189253145 + THE1B-int LTR MaLR 1 1054 -526 1781 121 19 29 chr5 10377006 10377313 -189252837 + L1PB1 LINE L1 5840 6143 -8 277 253 94 44 chr5 10377439 10377651 -189252499 + L1MC/D LINE L1 5555 5773 -629 260 303 58 53 chr5 10377984 10378192 -189251958 - L1MC/D LINE L1 -2034 6168 5960 4683 170 45 8 chr5 10378207 10379227 -189250923 - L1MA7 LINE L1 -5 6286 5228 640 193 135 66 chr5 10379229 10379473 -189250677 - MER2 DNA MER2_type 0 345 85 5717 168 22 6 chr5 10379489 10381460 -189248690 - L1PB1 LINE L1 0 6151 4150 386 282 64 11 chr5 10381467 10381655 -189248495 - L1MC/D LINE L1 -984 5556 5359 286 297 24 36 chr5 10381917 10382082 -189248068 - L1MC/D LINE L1 -4554 2167 2005 407 302 41 18 chr5 10382086 10382255 -189247895 - L1MC/D LINE L1 -4722 1818 1646 4727 166 13 1 chr5 10382545 10383367 -189246783 + L1PA16 LINE L1 5329 6160 -6 242 325 98 41 chr5 10383387 10383581 -189246569 - L2 LINE L2 -101 3212 3008 218 291 13 25 chr5 10383575 10383654 -189246496 + L2 LINE L2 2246 2323 -991 * 3786 160 50 21 chr5 10383655 10384356 -189245794 + MER50 LTR ERV1 1 721 -13 246 270 124 0 chr5 10384372 10384461 -189245689 + L2 LINE L2 2346 2445 -869 747 302 88 36 chr5 10384534 10384954 -189245196 - L1MC/D LINE L1 -5926 795 354 1734 165 132 26 chr5 10385348 10385735 -189244415 + MSTA LTR MaLR 1 428 0 8620 167 11 34 chr5 10385737 10387352 -189242798 + MSTA-int LTR MaLR 3 1580 0 1739 185 125 10 chr5 10387352 10387736 -189242414 + MSTA LTR MaLR 1 428 0 731 203 0 0 chr5 10388176 10388309 -189241841 + FLAM_A SINE Alu 1 133 0 4666 222 54 7 chr5 10388397 10390094 -189240056 - L1MC1 LINE L1 -19 6314 4533 4209 257 37 37 chr5 10390090 10390131 -189240019 - L1MC1 LINE L1 -1899 4247 4207 * 2517 146 41 2 chr5 10390131 10390543 -189239607 + MSTA LTR MaLR 1 428 0 4209 257 37 37 chr5 10390543 10391854 -189238296 - L1MC1 LINE L1 -1939 4207 2892 1500 162 25 0 chr5 10391854 10392138 -189238012 - L1MA3 LINE L1 -2 6303 6013 4209 257 37 37 chr5 10392138 10392506 -189237644 - L1MC1 LINE L1 -3253 2893 2526 2163 180 34 24 chr5 10392506 10392633 -189237517 + MSTA LTR MaLR 2 126 -302 1325 154 57 124 chr5 10392633 10392801 -189237349 + THE1C LTR MaLR 1 179 -196 1855 121 23 4 chr5 10392801 10393066 -189237084 - AluSq SINE Alu -14 299 30 1325 154 57 124 chr5 10393066 10393299 -189236851 + THE1C LTR MaLR 179 375 0 2163 180 34 24 chr5 10393299 10393588 -189236562 + MSTA LTR MaLR 126 422 -6 201 154 0 0 chr5 10393663 10393702 -189236448 + (CA)n Simple_repeat Simple_repeat 2 40 0 25 31 0 0 chr5 10393838 10393870 -189236280 + AT_rich Low_complexity Low_complexity 1 32 0 2150 120 18 20 chr5 10395728 10396070 -189234080 - MER61A LTR ERV1 0 343 3 608 271 81 9 chr5 10396335 10396556 -189233594 + MIR SINE MIR 26 262 0 216 360 105 35 chr5 10396648 10396820 -189233330 - MIR3 SINE MIR -9 199 16 329 371 83 19 chr5 10397739 10398003 -189232147 + L2 LINE L2 2983 3263 -9 2477 101 2 78 chr5 10398141 10398549 -189231601 - MER51B LTR ERV1 0 377 1 1017 304 77 29 chr5 10398763 10399346 -189230804 + L1PBa LINE L1 168 778 -6085 442 101 217 0 chr5 10399346 10399415 -189230735 + THE1B LTR MaLR 1 84 -280 1552 246 33 35 chr5 10399456 10399879 -189230271 + L1PBa LINE L1 1218 1639 -5224 * 6114 215 31 22 chr5 10399848 10402197 -189227953 + L1PB3 LINE L1 5 2450 -3753 9355 194 17 10 chr5 10402202 10405341 -189224809 + L1PB3 LINE L1 3046 6209 -2 2413 86 0 0 chr5 10405680 10405981 -189224169 + AluY SINE Alu 1 301 -10 204 208 42 0 chr5 10407051 10407099 -189223051 + (CATATA)n Simple_repeat Simple_repeat 4 53 0 374 245 141 52 chr5 10407620 10407869 -189222281 - L1M4 LINE L1 -775 5371 5101 192 354 25 56 chr5 10408025 10408186 -189221964 - L2 LINE L2 -499 2815 2660 718 264 123 82 chr5 10408786 10409296 -189220854 - MLT1G LTR MaLR 0 595 5 2056 132 0 3 chr5 10409556 10409843 -189220307 - AluSq SINE Alu -27 286 1 668 226 31 51 chr5 10411026 10411318 -189218832 + pTR5 LTR ERV1 743 1028 -1410 3123 134 22 146 chr5 10411496 10412282 -189217868 + LTR12 LTR ERV1 1 688 0 570 54 14 0 chr5 10412286 10412372 -189217778 + LTR12 LTR ERV1 307 690 -24 28 78 0 29 chr5 10417329 10417432 -189212718 + AT_rich Low_complexity Low_complexity 1 100 0 2301 237 61 15 chr5 10417736 10418322 -189211828 - MLT1E2 LTR MaLR -1 625 13 729 237 6 6 chr5 10419077 10419250 -189210900 - L1MA10 LINE L1 -1 6333 6161 1225 197 0 13 chr5 10420222 10420455 -189209695 - L1MC3 LINE L1 -259 7526 7297 210 71 0 0 chr5 10420455 10420483 -189209667 + (TTCC)n Simple_repeat Simple_repeat 3 30 0 1547 143 13 0 chr5 10420485 10420723 -189209427 - AluSg/x SINE Alu -1 311 71 271 105 0 0 chr5 10420723 10420761 -189209389 - Alu SINE Alu -262 38 1 412 197 0 0 chr5 10420761 10420832 -189209318 - L1MC3 LINE L1 -483 7302 7232 684 264 150 48 chr5 10421838 10422258 -189207892 + LTR33A LTR ERVL 59 521 -2 180 135 0 0 chr5 10422485 10422522 -189207628 + (TTCA)n Simple_repeat Simple_repeat 4 40 0 2230 216 16 26 chr5 10423320 10423825 -189206325 + MER89 LTR ERV1 60 559 0 181 382 0 0 chr5 10424467 10424483 -189205667 + L3 LINE CR1 1508 1523 -54 4524 95 2 0 chr5 10424483 10425074 -189205076 - L1PA13 LINE L1 0 6163 5572 181 382 0 0 chr5 10425074 10425125 -189205025 + L3 LINE CR1 1522 1575 -2 261 324 39 19 chr5 10425476 10425683 -189204467 + L3 LINE CR1 1179 1389 -188 924 221 36 29 chr5 10425710 10425991 -189204159 + L1MC3 LINE L1 7503 7785 0 312 238 143 8 chr5 10426818 10426874 -189203276 - L1MA10 LINE L1 -7 6327 6272 863 275 67 55 chr5 10426874 10427310 -189202840 - L1ME1 LINE L1 -74 6092 5652 5525 39 2 5 chr5 10427310 10427944 -189202206 - L1PA5 LINE L1 0 6154 5523 311 183 0 0 chr5 10427967 10428027 -189202123 - L1ME1 LINE L1 -494 5672 5613 6693 62 32 0 chr5 10478193 10479152 -189150998 - L1PA7 LINE L1 -1 6153 5177 489 81 14 0 chr5 10479152 10479226 -189150924 + L1PA7 LINE L1 5115 5189 -957 21 36 0 0 chr5 10480192 10480220 -189149930 + AT_rich Low_complexity Low_complexity 1 28 0 2471 98 136 2 chr5 10480306 10480703 -189149447 + L1PA14 LINE L1 5709 6158 -3 1768 186 49 46 chr5 10480705 10481181 -189148969 + L1M3 LINE L1 5248 5725 -455 2447 183 37 123 chr5 10481321 10482156 -189147994 + L1MB4 LINE L1 5418 6180 0 1364 116 0 54 chr5 10482290 10482514 -189147636 + AluSq SINE Alu 22 233 -80 1169 241 118 42 chr5 10482971 10483427 -189146723 - MER74A LTR ERVL -63 495 5 2239 156 5 39 chr5 10484393 10484835 -189145315 - L1MA4A LINE L1 -5 7000 6574 13063 194 75 38 chr5 10484935 10485179 -189144971 - L1MA4A LINE L1 -717 6288 6054 414 224 138 17 chr5 10485179 10485295 -189144855 - FLAM_C SINE Alu -2 131 2 13063 194 75 38 chr5 10485295 10491106 -189139044 - L1MA4A LINE L1 -951 6054 1 658 345 109 7 chr5 10493897 10494308 -189135842 - LTR33 LTR ERVL -68 453 1 2702 112 26 24 chr5 10494349 10494770 -189135380 + MSTA LTR MaLR 7 428 0 206 361 56 0 chr5 10494887 10494959 -189135191 + L2 LINE L2 3156 3231 -41 639 176 0 0 chr5 10494978 10495086 -189135064 + FLAM_A SINE Alu 15 122 -20 934 185 9 5 chr5 10495148 10495364 -189134786 - L1MA7 LINE L1 -10 6281 6065 215 195 65 39 chr5 10496124 10496201 -189133949 - MIR SINE MIR -56 206 128 408 337 27 11 chr5 10496412 10496596 -189133554 + MIR SINE MIR 8 194 -68 3173 224 41 0 chr5 10496971 10497649 -189132501 - MER54A LTR ERVL 0 901 196 588 237 179 12 chr5 10497920 10498224 -189131926 + L1MC4a LINE L1 5537 5750 -371 2477 80 0 0 chr5 10498813 10499124 -189131026 + AluY SINE Alu 1 311 0 1747 236 83 18 chr5 10500849 10501418 -189128732 - L1ME1 LINE L1 -20 6146 5541 5608 182 39 11 chr5 10501973 10502374 -189127776 - L1MA8 LINE L1 -96 6195 5807 315 0 0 0 chr5 10502374 10502409 -189127741 + (TG)n Simple_repeat Simple_repeat 2 36 0 5608 182 39 11 chr5 10502409 10503459 -189126691 - L1MA8 LINE L1 -484 5807 4666 225 0 0 0 chr5 10503459 10503484 -189126666 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 5608 182 39 11 chr5 10503484 10504031 -189126119 - L1MA8 LINE L1 -1625 4666 4136 5215 25 0 5 chr5 10504163 10504773 -189125377 - L1PA3 LINE L1 -3 6152 5546 1926 312 49 42 chr5 10504789 10505922 -189124228 - L1M3f LINE L1 -4146 1182 41 251 214 18 0 chr5 10506404 10506460 -189123690 + L1ME LINE L1 5821 5877 -287 268 250 40 55 chr5 10506567 10506683 -189123467 - MLT1J2 LTR MaLR -293 157 80 24 0 0 0 chr5 10507260 10507284 -189122866 + AT_rich Low_complexity Low_complexity 1 24 0 2144 247 93 24 chr5 10507574 10508472 -189121678 - L1ME1 LINE L1 -41 6194 5244 2116 143 20 6 chr5 10508474 10508831 -189121319 + THE1B LTR MaLR 3 364 0 3131 105 47 76 chr5 10508831 10509383 -189120767 + THE1B-int LTR MaLR 1 536 -1044 779 60 0 17 chr5 10509379 10509495 -189120655 + THE1B-int LTR MaLR 1461 1574 -6 * 2198 150 14 3 chr5 10509500 10509860 -189120290 + THE1B LTR MaLR 1 364 0 397 246 126 0 chr5 10509878 10510053 -189120097 - L1ME1 LINE L1 -987 5228 5032 439 266 51 59 chr5 10510095 10510211 -189119939 - L1ME1 LINE L1 -4891 1357 1242 2126 135 3 0 chr5 10510211 10510522 -189119628 - AluSx SINE Alu 0 312 1 439 266 51 59 chr5 10510522 10510959 -189119191 - L1ME1 LINE L1 -5006 1242 791 1627 199 30 41 chr5 10511078 10511519 -189118631 + MER65A LTR ERV1 1 436 -9 2459 89 129 5 chr5 10512570 10512964 -189117186 - LTR7 LTR ERV1 -7 443 1 2390 105 69 10 chr5 10512964 10513355 -189116795 - HERVH LTR ERV1 0 7713 7300 1341 136 28 0 chr5 10513338 10513552 -189116598 - HERVH LTR ERV1 -1894 5819 5600 * 4576 127 1 1 chr5 10513553 10514215 -189115935 - HERVH LTR ERV1 -2564 5149 4488 6330 84 2 2 chr5 10514217 10515071 -189115079 - HERVH LTR ERV1 -3720 3993 3140 * 10941 90 8 27 chr5 10515057 10516666 -189113484 - HERVH LTR ERV1 -4721 2992 1415 37553 39 2 3 chr5 10516666 10521975 -189108175 - L1PA4 LINE L1 -2 6153 850 5505 110 24 17 chr5 10521975 10523455 -189106695 - HERVH LTR ERV1 -6283 1430 1 1709 95 4 16 chr5 10523477 10523742 -189106408 - HERVH LTR ERV1 -6953 760 437 183 42 0 0 chr5 10523981 10524005 -189106145 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1322 92 47 15 chr5 10524742 10524995 -189105155 - HERVH LTR ERV1 -6953 760 437 2395 73 7 0 chr5 10526796 10527099 -189103051 + AluY SINE Alu 1 305 -6 588 280 36 10 chr5 10528185 10528378 -189101772 - MIR SINE MIR 0 262 65 873 299 129 6 chr5 10528565 10528929 -189101221 + MER69 DNA AcHobo 102 510 -2016 599 277 103 29 chr5 10528953 10529408 -189100742 + MER69 DNA AcHobo 2011 2499 -27 1293 178 85 90 chr5 10529524 10529568 -189100582 - MLT1A1 LTR MaLR 0 365 322 1880 131 0 0 chr5 10529568 10529836 -189100314 + AluSc SINE Alu 37 304 -5 1293 178 85 90 chr5 10529836 10530157 -189099993 - MLT1A1 LTR MaLR -43 322 2 300 315 0 0 chr5 10530610 10530718 -189099432 + CT-rich Low_complexity Low_complexity 1 108 0 990 237 38 114 chr5 10531494 10531916 -189098234 - MLT1B LTR MaLR 0 390 1 2001 112 36 10 chr5 10532853 10532886 -189097264 - AluY SINE Alu 0 311 280 297 0 0 0 chr5 10532886 10532919 -189097231 + (TTG)n Simple_repeat Simple_repeat 1 33 0 2001 112 36 10 chr5 10532919 10533188 -189096962 - AluY SINE Alu -31 280 1 2097 118 7 10 chr5 10533253 10533549 -189096601 - AluSq SINE Alu -18 295 1 3080 233 17 27 chr5 10534325 10534510 -189095640 + L1M4 LINE L1 4531 4716 -1430 2342 189 26 35 chr5 10534510 10534969 -189095181 - MSTB2 LTR MaLR 0 457 3 3080 233 17 27 chr5 10534969 10535610 -189094540 + L1M4 LINE L1 4716 5349 -797 2197 103 3 29 chr5 10535698 10536010 -189094140 - AluSp SINE Alu -9 304 1 265 193 34 91 chr5 10536011 10536099 -189094051 - L1PA16 LINE L1 -40 6829 6747 4394 215 43 14 chr5 10536199 10538778 -189091372 - L1PA16 LINE L1 -135 6734 2540 1152 129 31 0 chr5 10538781 10538974 -189091176 + L1PA15-16 LINE L1 1740 1938 -4911 3036 154 54 5 chr5 10538974 10539571 -189090579 - L1PA16 LINE L1 -4266 2583 1958 1428 166 169 13 chr5 10539557 10539864 -189090286 - L1PA11 LINE L1 0 6174 5820 * 429 232 32 0 chr5 10539877 10540032 -189090118 + CT-rich Low_complexity Low_complexity 1 160 0 8870 197 83 16 chr5 10540035 10541779 -189088371 - L1PA16 LINE L1 -4870 1979 119 2355 135 30 16 chr5 10541779 10542149 -189088001 + THE1C LTR MaLR 1 375 0 9640 136 37 15 chr5 10542149 10543689 -189086461 + THE1C-int LTR MaLR 1 1574 -6 2280 141 35 16 chr5 10543694 10544062 -189086088 + THE1C LTR MaLR 1 375 0 864 84 34 0 chr5 10544062 10544181 -189085969 - L1PA16 LINE L1 -6726 123 1 * 3204 224 44 6 chr5 10544175 10544971 -189085179 + L1MB7 LINE L1 5317 6142 -42 189 0 0 0 chr5 10545588 10545609 -189084541 + (CAAAAA)n Simple_repeat Simple_repeat 3 23 0 301 185 99 12 chr5 10549927 10550008 -189080142 + L1MCa LINE L1 1977 2064 -4362 189 0 0 0 chr5 10551433 10551454 -189078696 + (A)n Simple_repeat Simple_repeat 1 21 0 2090 134 3 3 chr5 10554190 10554496 -189075654 - AluJb SINE Alu -6 306 1 311 193 12 0 chr5 10555617 10555700 -189074450 + GA-rich Low_complexity Low_complexity 4 87 0 2151 113 3 3 chr5 10560248 10560552 -189069598 - AluSp SINE Alu 0 305 2 257 255 10 88 chr5 10563726 10563828 -189066322 + MIR SINE MIR 50 143 -65 312 324 28 34 chr5 10563992 10564171 -189065979 + MER46C DNA MER2_type 159 336 -2 192 279 9 90 chr5 10564173 10564284 -189065866 + MIR SINE MIR 153 254 -8 219 36 0 0 chr5 10564540 10564568 -189065582 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 1808 146 3 14 chr5 10564621 10564934 -189065216 - AluSx SINE Alu 0 310 1 656 257 27 16 chr5 10565510 10565697 -189064453 - MER5A DNA MER1_type 0 189 1 24 0 0 0 chr5 10571338 10571362 -189058788 + AT_rich Low_complexity Low_complexity 1 24 0 4864 152 10 12 chr5 10571662 10571908 -189058242 + L1MB1 LINE L1 5361 5606 -562 1897 154 3 0 chr5 10571908 10572207 -189057943 + AluSx SINE Alu 1 300 -12 4864 152 10 12 chr5 10572207 10572770 -189057380 + L1MB1 LINE L1 5606 6168 0 21 71 0 0 chr5 10573621 10573663 -189056487 + AT_rich Low_complexity Low_complexity 1 42 0 279 59 0 0 chr5 10574636 10574684 -189055466 - L1PA2 LINE L1 0 6155 6107 1937 173 0 0 chr5 10575017 10575318 -189054832 - AluSx SINE Alu -11 301 1 210 189 19 19 chr5 10576250 10576303 -189053847 + (TCCA)n Simple_repeat Simple_repeat 1 53 0 282 238 12 36 chr5 10576831 10576915 -189053235 - L2 LINE L2 -32 3281 3200 381 211 96 29 chr5 10577530 10577634 -189052516 - ORSL DNA AcHobo -1 274 164 1490 215 18 0 chr5 10577922 10578229 -189051921 - AluJo SINE Alu 0 312 1 2431 99 3 3 chr5 10579793 10580126 -189050024 + L1PA7 LINE L1 5675 6007 -147 526 146 73 0 chr5 10580126 10580222 -189049928 + AluJb SINE Alu 208 310 -2 193 370 65 7 chr5 10581228 10581366 -189048784 - MIR SINE MIR -116 146 1 225 0 0 0 chr5 10583048 10583073 -189047077 + (TAAAA)n Simple_repeat Simple_repeat 5 29 0 1814 280 88 53 chr5 10583154 10584227 -189045923 - HAL1 LINE L1 -1156 1351 241 2520 225 23 8 chr5 10584238 10584758 -189045392 - MER68 LTR ERV1 0 562 35 21 0 0 0 chr5 10585050 10585071 -189045079 + AT_rich Low_complexity Low_complexity 1 21 0 2375 96 0 0 chr5 10585556 10585859 -189044291 + AluSx SINE Alu 1 303 -9 2550 278 49 35 chr5 10587542 10588490 -189041660 + L1ME1 LINE L1 38 772 -4925 4568 242 107 31 chr5 10588507 10590284 -189039866 + L1ME1 LINE L1 3656 5565 -757 1868 245 47 38 chr5 10590676 10591309 -189038841 + L1ME1 LINE L1 5592 6230 -5 2453 89 0 0 chr5 10591392 10591695 -189038455 + AluSc SINE Alu 1 303 -6 1401 184 20 13 chr5 10591701 10592095 -189038055 + L1MA4A LINE L1 5823 6280 -23 369 0 0 0 chr5 10592336 10592377 -189037773 + (TG)n Simple_repeat Simple_repeat 2 42 0 225 0 0 0 chr5 10594055 10594080 -189036070 + (CA)n Simple_repeat Simple_repeat 2 26 0 207 157 20 20 chr5 10594453 10594504 -189035646 + A-rich Low_complexity Low_complexity 2 52 0 2449 95 0 11 chr5 10594626 10594975 -189035175 + L1PA7 LINE L1 2739 3083 -3063 7180 63 10 8 chr5 10594976 10596022 -189034128 + L1PA7 LINE L1 5108 6154 0 1386 258 119 39 chr5 10596333 10596871 -189033279 + MLT1E LTR MaLR 13 593 0 261 219 0 0 chr5 10596875 10596948 -189033202 + (TA)n Simple_repeat Simple_repeat 1 73 0 265 294 50 17 chr5 10598047 10598166 -189031984 + MIR SINE MIR 103 225 -37 387 60 0 0 chr5 10599041 10599091 -189031059 + (TCCA)n Simple_repeat Simple_repeat 3 52 0 2388 136 43 14 chr5 10599826 10600178 -189029972 + THE1B LTR MaLR 1 362 -2 12469 92 14 0 chr5 10600180 10601738 -189028412 + THE1B-int LTR MaLR 1 1579 -1 1324 125 64 53 chr5 10601739 10602023 -189028127 + THE1B LTR MaLR 1 284 -91 296 100 0 0 chr5 10602131 10602171 -189027979 + THE1B LTR MaLR 316 355 0 207 188 0 0 chr5 10603045 10603093 -189027057 + T-rich Low_complexity Low_complexity 2 49 0 2095 98 9 67 chr5 10603527 10603855 -189026295 + AluSc SINE Alu 1 309 0 189 0 0 0 chr5 10604153 10604174 -189025976 + (TA)n Simple_repeat Simple_repeat 2 22 0 206 323 71 55 chr5 10604583 10604710 -189025440 + L2 LINE L2 3123 3251 -21 671 284 15 61 chr5 10605134 10605461 -189024689 - L1M4 LINE L1 -1981 4165 3854 347 294 70 80 chr5 10605587 10605774 -189024376 + MER91A DNA MER1_type 12 196 0 283 326 10 0 chr5 10606162 10606260 -189023890 - L2 LINE L2 -15 3298 3200 2108 112 47 0 chr5 10608945 10609241 -189020909 + AluSg SINE Alu 1 310 0 2167 81 3 14 chr5 10610645 10610929 -189019221 + L1PA7 LINE L1 5873 6153 -1 391 219 202 0 chr5 10611471 10611654 -189018496 - MIR SINE MIR -30 232 13 1451 206 19 3 chr5 10612276 10612583 -189017567 - L1P2 LINE L1 -397 5758 5452 * 1498 213 47 30 chr5 10612577 10612925 -189017225 - L1MA9 LINE L1 -174 6138 5781 369 0 0 0 chr5 10612925 10612966 -189017184 + (TG)n Simple_repeat Simple_repeat 2 42 0 1498 213 47 30 chr5 10612966 10613021 -189017129 - L1MA9 LINE L1 -531 5781 5728 1085 177 18 29 chr5 10613018 10613316 -189016834 + L1M2 LINE L1 5193 5489 -698 * 403 266 31 16 chr5 10613317 10613445 -189016705 + L1MA9 LINE L1 6145 6274 -38 1903 149 22 0 chr5 10614332 10614650 -189015500 + AluSx SINE Alu 1 324 0 344 221 87 29 chr5 10617208 10617312 -189012838 + MER91C DNA MER1_type 24 133 -7 331 315 8 24 chr5 10617723 10617850 -189012300 + MIR SINE MIR 112 236 -26 21 57 0 0 chr5 10618938 10618973 -189011177 + AT_rich Low_complexity Low_complexity 1 35 0 446 350 23 18 chr5 10620484 10620701 -189009449 + MIR SINE MIR 39 256 -6 196 237 219 18 chr5 10621385 10621499 -189008651 - MIR3 SINE MIR -60 148 12 27 29 0 0 chr5 10623091 10623125 -189007025 + AT_rich Low_complexity Low_complexity 1 34 0 2750 13 0 22 chr5 10625396 10625712 -189004438 - AluYa5 SINE Alu -2 309 1 1750 253 104 8 chr5 10629069 10629590 -189000560 + MLT1E LTR MaLR 8 578 -15 434 278 43 16 chr5 10629604 10629791 -189000359 + MLT1E-int LTR MaLR 6 197 -1174 488 181 23 38 chr5 10629824 10629957 -189000193 + L1MA8 LINE L1 6142 6272 -19 3675 180 28 25 chr5 10629977 10630834 -188999316 + L1MB4 LINE L1 5296 6155 -25 713 277 62 10 chr5 10630884 10631173 -188998977 + MLT1E-int LTR MaLR 313 616 -755 404 298 56 120 chr5 10631391 10632110 -188998040 + MLT1E-int LTR MaLR 692 1364 -7 1981 246 78 25 chr5 10632119 10632680 -188997470 + MLT1E LTR MaLR 3 593 0 1836 168 22 11 chr5 10633744 10634101 -188996049 - MER46B DNA MER2_type 0 236 1 26 0 0 0 chr5 10636273 10636299 -188993851 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chr5 10636308 10636330 -188993820 + AT_rich Low_complexity Low_complexity 1 22 0 26 50 0 0 chr5 10636452 10636492 -188993658 + AT_rich Low_complexity Low_complexity 1 40 0 27 73 0 0 chr5 10636704 10636759 -188993391 + AT_rich Low_complexity Low_complexity 1 55 0 28 71 0 0 chr5 10636992 10637048 -188993102 + AT_rich Low_complexity Low_complexity 1 56 0 2155 105 7 0 chr5 10637158 10637452 -188992698 - AluSx SINE Alu -16 296 1 22 0 0 0 chr5 10638486 10638508 -188991642 + AT_rich Low_complexity Low_complexity 1 22 0 2340 69 3 16 chr5 10639348 10639652 -188990498 + AluY SINE Alu 1 300 -11 384 209 0 0 chr5 10639755 10639841 -188990309 + GA-rich Low_complexity Low_complexity 2 87 0 2137 119 3 0 chr5 10640824 10641110 -188989040 - AluSx SINE Alu -25 287 1 1925 115 0 17 chr5 10641677 10641964 -188988186 - L1PA8 LINE L1 0 6172 5891 547 260 91 57 chr5 10642860 10643260 -188986890 - LTR8A LTR ERV1 -19 667 280 317 236 46 50 chr5 10643417 10643589 -188986561 - MER87 LTR ERV1 -395 146 1 1295 156 22 6 chr5 10643620 10644007 -188986143 + LTR47B LTR ERVL 1 443 0 181 390 26 0 chr5 10644123 10644200 -188985950 + MIR3 SINE MIR 109 187 -21 633 255 57 38 chr5 10644593 10644856 -188985294 + MLT1L LTR MaLR 127 394 -221 1089 157 52 9 chr5 10645158 10645368 -188984782 - MER20 DNA MER1_type 0 219 1 516 244 161 0 chr5 10646106 10646311 -188983839 - MIR SINE MIR -12 250 13 322 370 19 19 chr5 10646864 10647026 -188983124 + MIR SINE MIR 69 230 -32 1700 183 59 67 chr5 10647457 10647685 -188982465 - MSTB LTR MaLR -5 421 196 2475 77 0 0 chr5 10647685 10647996 -188982154 + AluY SINE Alu 1 311 0 1700 183 59 67 chr5 10647996 10648188 -188981962 - MSTB LTR MaLR -230 196 4 788 227 146 57 chr5 10648644 10648979 -188981171 + MLT1A1 LTR MaLR 1 365 0 281 298 78 7 chr5 10649340 10649481 -188980669 + MER104 DNA Tc2 29 179 -1 1795 174 3 25 chr5 10650130 10650198 -188979952 - AluJo SINE Alu -3 309 241 1793 155 64 25 chr5 10650198 10650559 -188979591 + THE1C LTR MaLR 1 375 0 1795 174 3 25 chr5 10650559 10650806 -188979344 - AluJo SINE Alu -71 241 1 2595 52 0 3 chr5 10651534 10651839 -188978311 - AluY SINE Alu -7 304 1 311 267 0 0 chr5 10653478 10653553 -188976597 - MIR SINE MIR -110 152 78 258 303 55 85 chr5 10654234 10654399 -188975751 - MIR SINE MIR -26 236 77 219 273 0 0 chr5 10654716 10654771 -188975379 + (TA)n Simple_repeat Simple_repeat 1 55 0 235 319 30 15 chr5 10654843 10654978 -188975172 - L1MC/D LINE L1 -1907 5901 5765 4155 97 24 14 chr5 10655011 10655639 -188974511 - L1PB1 LINE L1 -1 6150 5517 21 0 0 0 chr5 10656594 10656615 -188973535 + AT_rich Low_complexity Low_complexity 1 21 0 371 145 0 0 chr5 10657750 10657819 -188972331 + L1MA7 LINE L1 6193 6261 -30 364 306 79 81 chr5 10658399 10658817 -188971333 - L2 LINE L2 -8 3264 2848 1517 165 68 11 chr5 10659087 10659377 -188970773 + AluSx SINE Alu 1 305 0 206 258 65 0 chr5 10659488 10659550 -188970600 + MIR SINE MIR 124 189 -73 22 0 0 0 chr5 10659859 10659881 -188970269 + AT_rich Low_complexity Low_complexity 1 22 0 201 273 0 0 chr5 10661422 10661477 -188968673 + T-rich Low_complexity Low_complexity 1 55 0 199 305 179 0 chr5 10661707 10661802 -188968348 - MIR SINE MIR -131 131 20 2040 132 13 20 chr5 10662044 10662347 -188967803 - AluSx SINE Alu -11 301 1 210 418 27 0 chr5 10663086 10663196 -188966954 + L2 LINE L2 3143 3255 -17 1867 126 70 0 chr5 10663686 10663972 -188966178 - AluSg SINE Alu -4 306 1 206 118 0 0 chr5 10664111 10664145 -188966005 + (A)n Simple_repeat Simple_repeat 1 34 0 1274 268 89 37 chr5 10664782 10665115 -188965035 + REP3 LTR ERV 27 395 -167 2153 114 0 0 chr5 10665115 10665422 -188964728 - AluSx SINE Alu 0 307 1 1274 268 89 37 chr5 10665422 10665572 -188964578 + REP3 LTR ERV 395 536 -26 584 212 66 7 chr5 10665573 10665710 -188964440 + MER58B DNA MER1_type 192 336 -5 2180 130 3 0 chr5 10665764 10666071 -188964079 + AluSx SINE Alu 1 308 -4 748 200 8 0 chr5 10666415 10666540 -188963610 - FLAM_C SINE Alu -16 127 2 244 272 37 88 chr5 10667390 10667526 -188962624 + MIR SINE MIR 46 174 -88 2176 112 14 3 chr5 10669192 10669487 -188960663 + AluSx SINE Alu 1 298 -14 2174 133 0 0 chr5 10670167 10670468 -188959682 + AluSx SINE Alu 1 301 -11 447 68 0 0 chr5 10670468 10670480 -188959670 + (TG)n Simple_repeat Simple_repeat 1 71 0 447 68 0 0 chr5 10670480 10670539 -188959611 + (TG)n Simple_repeat Simple_repeat 2 60 0 362 314 80 7 chr5 10671200 10671337 -188958813 + MER5B DNA MER1_type 29 175 -3 243 348 70 21 chr5 10674326 10674513 -188955637 + L2 LINE L2 3117 3312 -1 790 147 159 0 chr5 10675313 10675476 -188954674 - MER53 DNA DNA 0 189 1 5574 81 7 19 chr5 10675851 10676605 -188953545 + L1PA8A LINE L1 5387 6131 0 22 0 0 0 chr5 10677039 10677061 -188953089 + AT_rich Low_complexity Low_complexity 1 22 0 886 176 99 43 chr5 10677747 10678049 -188952101 - MER33 DNA MER1_type -1 323 5 265 328 50 17 chr5 10678235 10678354 -188951796 - MIR3 SINE MIR -50 158 36 410 180 22 0 chr5 10678787 10678876 -188951274 + (TATATG)n Simple_repeat Simple_repeat 2 92 0 228 277 116 9 chr5 10679047 10679159 -188950991 - MIR3 SINE MIR -1 207 84 2239 167 24 0 chr5 10679884 10680256 -188949894 + MLT1B LTR MaLR 1 381 -9 439 116 40 36 chr5 10680275 10680579 -188949571 + (TA)n Simple_repeat Simple_repeat 1 305 0 281 218 30 99 chr5 10682432 10682533 -188947617 + L2 LINE L2 3196 3289 -24 248 302 171 24 chr5 10682554 10682759 -188947391 + MIR SINE MIR 28 262 0 207 262 24 60 chr5 10684503 10684587 -188945563 - MER5B DNA MER1_type -71 107 27 1133 162 11 109 chr5 10685290 10685574 -188944576 + L1MA9 LINE L1 6032 6287 -25 1703 195 22 30 chr5 10686720 10687084 -188943066 + MLT1A1 LTR MaLR 5 365 0 180 0 0 0 chr5 10689538 10689558 -188940592 + (T)n Simple_repeat Simple_repeat 1 20 0 2024 177 28 14 chr5 10689621 10689977 -188940173 - MLT1A1 LTR MaLR -4 361 1 1992 244 58 70 chr5 10692187 10692844 -188937306 + MLT1E1 LTR MaLR 6 654 0 1966 125 10 16 chr5 10694573 10694885 -188935265 - AluSg SINE Alu 0 310 1 1562 227 66 37 chr5 10696099 10696553 -188933597 - MLT1C LTR MaLR 0 467 1 216 264 170 50 chr5 10698327 10698486 -188931664 + L2 LINE L2 3077 3254 -59 195 317 59 10 chr5 10698541 10698642 -188931508 + L2 LINE L2 2431 2536 -778 545 226 123 64 chr5 10698652 10698856 -188931294 - MER106A DNA MER1_type 0 236 21 234 328 46 36 chr5 10699045 10699240 -188930910 + L2 LINE L2 2625 2821 -493 569 329 62 26 chr5 10700391 10700813 -188929337 - HAL1b LINE L1 -829 519 83 1585 218 0 0 chr5 10701188 10701486 -188928664 - AluJo SINE Alu -14 298 1 510 149 184 0 chr5 10701846 10701960 -188928190 - L1MB7 LINE L1 -1 6183 6049 953 207 76 11 chr5 10702950 10703225 -188926925 - L1MA4 LINE L1 -3 6297 6005 1747 171 48 25 chr5 10704263 10704619 -188925531 + MLT1A1 LTR MaLR 2 365 0 221 294 109 23 chr5 10705061 10705326 -188924824 + L2 LINE L2 1702 1989 -1325 312 286 40 48 chr5 10705514 10705640 -188924510 + L2 LINE L2 3171 3295 -18 265 282 19 19 chr5 10707361 10707464 -188922686 + GA-rich Low_complexity Low_complexity 2 104 0 204 306 52 60 chr5 10708441 10708575 -188921575 + MIR SINE MIR 80 212 -50 1946 139 0 0 chr5 10709829 10710132 -188920018 + AluSg1 SINE Alu 1 303 0 1576 180 17 20 chr5 10711383 10711683 -188918467 - AluJo SINE Alu -13 299 1 229 374 80 0 chr5 10712124 10712311 -188917839 + MIR SINE MIR 28 229 -33 1124 244 69 41 chr5 10712394 10712758 -188917392 + MLT1A2 LTR MaLR 1 374 0 219 330 117 10 chr5 10712777 10712880 -188917270 + MIR3 SINE MIR 93 206 -2 744 33 0 0 chr5 10713936 10714027 -188916123 + (TG)n Simple_repeat Simple_repeat 2 92 0 446 311 137 5 chr5 10714484 10714696 -188915454 - MIR SINE MIR -13 249 10 216 296 80 0 chr5 10715229 10715317 -188914833 - MIR SINE MIR -117 145 51 447 267 9 26 chr5 10717122 10717238 -188912912 + MER81 DNA DNA 1 114 0 180 77 0 0 chr5 10720436 10720462 -188909688 + (CAA)n Simple_repeat Simple_repeat 2 27 0 607 241 89 11 chr5 10720739 10720950 -188909200 - MIR SINE MIR 0 262 36 2126 154 0 40 chr5 10720957 10721308 -188908842 + MER1B DNA MER1_type 1 337 0 185 175 25 25 chr5 10723140 10723180 -188906970 + MIR SINE MIR 223 262 0 414 0 0 0 chr5 10723343 10723389 -188906761 + (TA)n Simple_repeat Simple_repeat 1 46 0 2270 110 3 0 chr5 10723438 10723739 -188906411 - AluSp SINE Alu -11 302 1 21 0 0 0 chr5 10724019 10724040 -188906110 + AT_rich Low_complexity Low_complexity 1 21 0 629 13 13 0 chr5 10724106 10724184 -188905966 + (TAGA)n Simple_repeat Simple_repeat 3 81 0 229 336 78 9 chr5 10724272 10724388 -188905762 + MIR SINE MIR 67 190 -72 307 304 9 9 chr5 10726110 10726225 -188903925 + MER94 DNA DNA 2 116 -18 182 345 0 0 chr5 10726657 10726715 -188903435 - L3b LINE CR1 -340 1243 1186 214 303 123 58 chr5 10726902 10727057 -188903093 + MIR SINE MIR 20 184 -78 353 354 39 8 chr5 10728984 10729114 -188901036 - L2 LINE L2 -2 3270 3137 1945 196 3 8 chr5 10729134 10729501 -188900649 - MLT1A1 LTR MaLR 0 365 1 533 293 131 38 chr5 10729508 10729836 -188900314 - L2 LINE L2 0 3313 2936 813 275 28 0 chr5 10729836 10730054 -188900096 + MER58A DNA MER1_type 1 224 0 533 293 131 38 chr5 10730054 10730145 -188900005 - L2 LINE L2 -377 2936 2855 960 218 150 35 chr5 10731585 10731952 -188898198 + MLT1C LTR MaLR 1 409 -58 7012 196 20 50 chr5 10731952 10734221 -188895929 - L1PA12 LINE L1 -2795 4789 2604 1471 139 0 8 chr5 10734221 10734473 -188895677 + L1PA14 LINE L1 5910 6159 -2 350 176 14 14 chr5 10734487 10734561 -188895589 + MLT1C LTR MaLR 394 467 0 288 304 0 38 chr5 10735122 10735201 -188894949 - L2 LINE L2 0 3272 3197 288 318 86 20 chr5 10735209 10735360 -188894790 - MIR SINE MIR -13 249 89 2197 162 13 8 chr5 10735655 10736043 -188894107 + MLT1B LTR MaLR 1 390 0 2468 128 5 3 chr5 10736230 10736619 -188893531 + L1PB2 LINE L1 5761 6150 -1 288 98 20 0 chr5 10736658 10736709 -188893441 + L1PB2 LINE L1 6099 6150 -1 288 98 20 0 chr5 10736748 10736799 -188893351 + L1PB2 LINE L1 6099 6150 -1 2633 42 0 0 chr5 10737552 10737859 -188892291 - AluY SINE Alu -4 307 1 897 220 4 60 chr5 10739647 10739879 -188890271 + MER20 DNA MER1_type 1 219 0 180 111 0 0 chr5 10740004 10740031 -188890119 + (TG)n Simple_repeat Simple_repeat 1 27 0 349 309 93 27 chr5 10740268 10740527 -188889623 + MLT1L LTR MaLR 330 605 -10 2145 100 0 42 chr5 10741532 10741843 -188888307 + AluY SINE Alu 3 300 -11 337 304 58 12 chr5 10742174 10742345 -188887805 + MIR SINE MIR 64 242 -20 30 0 0 0 chr5 10742755 10742785 -188887365 + AT_rich Low_complexity Low_complexity 1 30 0 38 0 0 0 chr5 10743232 10743270 -188886880 + AT_rich Low_complexity Low_complexity 1 38 0 2470 70 0 0 chr5 10743811 10744111 -188886039 - AluY SINE Alu -11 300 1 218 313 63 115 chr5 10744305 10744730 -188885420 - L2 LINE L2 -2 3270 2868 306 291 67 67 chr5 10744761 10744971 -188885179 - L2 LINE L2 -542 2772 2563 897 129 7 21 chr5 10745211 10745351 -188884799 - AluJb SINE Alu -174 138 1 1787 161 0 49 chr5 10746237 10746561 -188883589 - AluJb SINE Alu -3 309 2 2063 128 13 13 chr5 10747446 10747752 -188882398 + AluSx SINE Alu 1 306 -6 229 284 11 49 chr5 10748750 10748933 -188881217 + (TATATG)n Simple_repeat Simple_repeat 2 177 0 290 275 12 0 chr5 10751651 10751731 -188878419 + MER20 DNA MER1_type 138 218 -1 239 228 22 43 chr5 10752002 10752094 -188878056 + GA-rich Low_complexity Low_complexity 4 93 0 2332 122 34 0 chr5 10752103 10752455 -188877695 - THE1B LTR MaLR 0 364 1 22 35 0 0 chr5 10753687 10753716 -188876434 + AT_rich Low_complexity Low_complexity 1 29 0 300 232 12 24 chr5 10753918 10754000 -188876150 - L1ME4a LINE L1 -185 5936 5856 33 43 0 0 chr5 10754523 10754570 -188875580 + AT_rich Low_complexity Low_complexity 1 47 0 21 0 0 0 chr5 10757213 10757234 -188872916 + AT_rich Low_complexity Low_complexity 1 21 0 255 247 94 12 chr5 10757536 10757621 -188872529 - L2 LINE L2 -2 3311 3220 1326 156 8 16 chr5 10758779 10759029 -188871121 + L1PB1 LINE L1 5900 6147 -4 1456 226 94 5 chr5 10759344 10759768 -188870382 - MLT1C LTR MaLR 0 467 6 470 268 168 9 chr5 10759865 10760085 -188870065 - MIR SINE MIR 0 262 8 409 323 137 20 chr5 10760433 10760770 -188869380 + L2 LINE L2 2664 3037 -276 430 283 36 7 chr5 10760812 10760950 -188869200 + L2 LINE L2 3171 3312 -1 1116 222 44 4 chr5 10761299 10761547 -188868603 + Tigger7 DNA MER2_type 10 267 -466 527 165 0 10 chr5 10761546 10761643 -188868507 + Tigger7 DNA MER2_type 2390 2485 -2 * 23 33 0 0 chr5 10761789 10761819 -188868331 + AT_rich Low_complexity Low_complexity 1 30 0 1091 233 93 77 chr5 10764737 10765230 -188864920 + MLT1D LTR MaLR 5 505 0 2724 167 39 6 chr5 10765347 10765880 -188864270 + MER34C LTR ERV1 35 585 0 199 310 60 114 chr5 10765943 10766127 -188864023 - L2 LINE L2 -180 3092 2919 1094 261 72 19 chr5 10767189 10767565 -188862585 + MSTD LTR MaLR 1 396 0 440 284 62 40 chr5 10768106 10768282 -188861868 - MIR SINE MIR -67 195 16 229 191 0 0 chr5 10770398 10770440 -188859710 - L2 LINE L2 -4 3309 3268 1184 331 118 28 chr5 10771773 10773013 -188857137 + L2 LINE L2 1954 3313 0 365 278 136 6 chr5 10774829 10774998 -188855152 + MIR SINE MIR 48 238 -24 2022 128 6 25 chr5 10775058 10775377 -188854773 - AluSq SINE Alu 0 313 1 2276 28 0 0 chr5 10775592 10775880 -188854270 - L1HS LINE L1 -3279 2867 2580 20403 20 0 0 chr5 10775880 10779165 -188850985 + L1HS LINE L1 2871 6155 0 31 44 0 0 chr5 10779165 10779210 -188850940 + AT_rich Low_complexity Low_complexity 1 45 0 198 0 0 0 chr5 10779213 10779235 -188850915 + (TAAAAA)n Simple_repeat Simple_repeat 2 23 0 2103 138 0 53 chr5 10779495 10779851 -188850299 + MER1B DNA MER1_type 1 337 0 221 232 11 63 chr5 10780556 10780651 -188849499 + GA-rich Low_complexity Low_complexity 5 94 0 2000 243 18 6 chr5 10781425 10781936 -188848214 + LTR53 LTR ERVL 3 519 0 247 261 52 70 chr5 10783244 10783359 -188846791 - MIR SINE MIR -118 144 32 318 375 53 33 chr5 10783558 10783918 -188846232 - L3 LINE CR1 -78 1499 1133 325 255 33 85 chr5 10783961 10784173 -188845977 + L1MC5 LINE L1 7725 7925 -36 21 71 0 0 chr5 10784254 10784296 -188845854 + AT_rich Low_complexity Low_complexity 1 42 0 265 324 39 10 chr5 10785687 10785789 -188844361 + MIR SINE MIR 53 157 -105 24 32 0 0 chr5 10785970 10786001 -188844149 + AT_rich Low_complexity Low_complexity 1 31 0 2178 226 59 6 chr5 10786148 10786675 -188843475 + MER68 LTR ERV1 1 555 -7 395 280 10 0 chr5 10787114 10787214 -188842936 + MER58 DNA MER1_type 10 110 -231 1813 151 133 21 chr5 10787253 10787636 -188842514 + MSTA LTR MaLR 1 426 -2 1016 166 10 5 chr5 10787640 10787839 -188842311 + MSTA-int LTR MaLR 3 202 -1378 29606 100 20 57 chr5 10787850 10794228 -188835922 + L1PA7 LINE L1 12 6153 -1 470 231 48 27 chr5 10794229 10794376 -188835774 - LTR49-int LTR ERV1 -3124 3207 3058 7603 150 5 34 chr5 10794387 10795810 -188834340 + MSTA-int LTR MaLR 200 1580 0 1820 147 124 48 chr5 10795810 10796206 -188833944 + MSTA LTR MaLR 1 426 -2 231 297 117 14 chr5 10796610 10796755 -188833395 - MIR3 SINE MIR -23 185 26 327 241 60 0 chr5 10797240 10797323 -188832827 - MIR SINE MIR -50 212 125 829 210 95 5 chr5 10797606 10797806 -188832344 + MER20 DNA MER1_type 1 218 -1 2075 113 39 0 chr5 10798081 10798365 -188831785 - AluSg1 SINE Alu -14 295 1 249 257 135 0 chr5 10799045 10799119 -188831031 + MLT1D LTR MaLR 2 85 -541 936 204 9 18 chr5 10799159 10799384 -188830766 + MLT1D LTR MaLR 283 505 0 1952 236 165 5 chr5 10799388 10799951 -188830199 - MLT1E1 LTR MaLR -1 653 1 385 110 79 18 chr5 10800236 10800400 -188829750 + (TAGA)n Simple_repeat Simple_repeat 4 177 0 909 159 5 15 chr5 10802106 10802301 -188827849 + L1MA4 LINE L1 6101 6293 -7 24 0 0 0 chr5 10802601 10802625 -188827525 + AT_rich Low_complexity Low_complexity 1 24 0 246 105 0 0 chr5 10802960 10802998 -188827152 + (CA)n Simple_repeat Simple_repeat 2 39 0 24 67 0 0 chr5 10803719 10803764 -188826386 + AT_rich Low_complexity Low_complexity 1 45 0 909 262 5 0 chr5 10803861 10804075 -188826075 + MER58A DNA MER1_type 1 215 -9 21 0 0 0 chr5 10804968 10804989 -188825161 + AT_rich Low_complexity Low_complexity 1 21 0 751 274 64 24 chr5 10805321 10805680 -188824470 - Charlie7 DNA MER1_type 0 2612 2149 1820 106 23 0 chr5 10805680 10805936 -188824214 + AluY SINE Alu 39 300 -11 751 274 64 24 chr5 10805936 10806153 -188823997 - Charlie7 DNA MER1_type -463 2149 1942 21 0 0 0 chr5 10806185 10806206 -188823944 + AT_rich Low_complexity Low_complexity 1 21 0 2782 107 46 7 chr5 10806310 10806768 -188823382 - L1PB1 LINE L1 0 6151 5676 284 272 35 18 chr5 10807002 10807116 -188823034 - Charlie7 DNA MER1_type -1010 1602 1487 286 232 30 30 chr5 10807192 10807291 -188822859 - Charlie7 DNA MER1_type -2383 229 131 180 336 109 34 chr5 10807376 10807495 -188822655 + MER5A DNA MER1_type 22 149 -40 371 298 105 11 chr5 10807498 10807777 -188822373 + MLT1H1 LTR MaLR 1 263 -292 344 88 18 0 chr5 10807839 10807896 -188822254 + (GA)n Simple_repeat Simple_repeat 1 58 0 390 196 52 0 chr5 10808059 10808156 -188821994 + MLT1H1 LTR MaLR 454 555 0 465 203 95 42 chr5 10808582 10808740 -188821410 - MIR SINE MIR -61 201 35 1183 162 5 18 chr5 10809021 10809243 -188820907 + MER20 DNA MER1_type 1 219 0 209 213 0 0 chr5 10811046 10811093 -188819057 + (TTCA)n Simple_repeat Simple_repeat 3 49 0 187 318 82 45 chr5 10811403 10811513 -188818637 - MER5A DNA MER1_type -40 149 36 214 116 0 47 chr5 10811778 10811821 -188818329 + (GGA)n Simple_repeat Simple_repeat 2 42 0 304 357 132 0 chr5 10811840 10812067 -188818083 + MIR SINE MIR 5 261 -1 21 0 0 0 chr5 10812562 10812583 -188817567 + AT_rich Low_complexity Low_complexity 1 21 0 441 129 0 0 chr5 10813409 10813479 -188816671 + (CATATA)n Simple_repeat Simple_repeat 4 73 0 864 174 177 119 chr5 10813550 10813795 -188816355 + MLT1A1 LTR MaLR 2 274 -91 1673 190 0 29 chr5 10813795 10814105 -188816045 - AluJb SINE Alu -2 310 10 864 174 177 119 chr5 10814105 10814203 -188815947 + MLT1A1 LTR MaLR 274 365 0 1500 190 62 60 chr5 10814293 10814757 -188815393 + MLT1C LTR MaLR 3 467 0 249 188 0 21 chr5 10815405 10815453 -188814697 - L3 LINE CR1 -5 1572 1526 1709 151 15 4 chr5 10816308 10816580 -188813570 - AluJb SINE Alu -37 275 1 344 219 14 0 chr5 10816612 10816685 -188813465 + MER20 DNA MER1_type 146 219 0 1103 218 100 50 chr5 10816841 10817281 -188812869 + MLT1C LTR MaLR 6 467 0 1568 215 81 39 chr5 10818052 10818535 -188811615 - MLT1D LTR MaLR -2 503 1 222 37 0 0 chr5 10819329 10819356 -188810794 + (CA)n Simple_repeat Simple_repeat 2 28 0 2221 71 0 0 chr5 10819369 10819637 -188810513 - AluY SINE Alu -15 296 29 817 185 6 0 chr5 10819812 10819990 -188810160 + L1MA6 LINE L1 6111 6289 -11 24 32 0 0 chr5 10820081 10820112 -188810038 + AT_rich Low_complexity Low_complexity 1 31 0 249 254 16 25 chr5 10820820 10820942 -188809208 - HAL1 LINE L1 -117 2390 2270 788 290 82 22 chr5 10820956 10821408 -188808742 - HAL1 LINE L1 -273 2234 1756 298 191 186 55 chr5 10821442 10821678 -188808472 - HAL1 LINE L1 -1333 1174 908 294 237 0 0 chr5 10821963 10822039 -188808111 + (TA)n Simple_repeat Simple_repeat 1 76 0 320 294 29 44 chr5 10822087 10822223 -188807927 - HAL1 LINE L1 -2012 495 362 484 294 69 40 chr5 10822273 10822800 -188807350 - L1MDa LINE L1 -4830 1710 1244 390 282 17 0 chr5 10822883 10823000 -188807150 - LTR16A1 LTR ERVL -318 139 21 953 266 83 32 chr5 10824408 10824840 -188805310 + LTR16A1 LTR ERVL 3 456 -1 494 310 33 5 chr5 10824951 10825135 -188805015 + MIR SINE MIR 31 219 -43 255 299 39 0 chr5 10825415 10825492 -188804658 - MIR SINE MIR -77 131 52 411 238 81 31 chr5 10825655 10825815 -188804335 + MLT1J2 LTR MaLR 64 231 -219 217 322 0 0 chr5 10826347 10826406 -188803744 - L2 LINE L2 0 3313 3255 429 171 67 98 chr5 10826407 10826571 -188803579 - MER58B DNA MER1_type -8 333 175 25 31 0 0 chr5 10826799 10826831 -188803319 + AT_rich Low_complexity Low_complexity 1 32 0 28 29 0 0 chr5 10826971 10827006 -188803144 + AT_rich Low_complexity Low_complexity 1 35 0 444 152 30 0 chr5 10827074 10827173 -188802977 + (TA)n Simple_repeat Simple_repeat 2 103 0 864 230 9 28 chr5 10827376 10827593 -188802557 - MER20 DNA MER1_type -1 218 6 2698 70 26 0 chr5 10827633 10828055 -188802095 + L1PA4 LINE L1 5736 6167 0 180 0 0 0 chr5 10828631 10828651 -188801499 + (A)n Simple_repeat Simple_repeat 1 20 0 925 243 11 21 chr5 10830578 10830862 -188799288 + MER33 DNA MER1_type 44 324 0 3524 227 68 49 chr5 10831410 10832725 -188797425 - L1MC4 LINE L1 -2 8040 6702 2150 151 35 14 chr5 10832938 10833061 -188797089 - L1MA8 LINE L1 0 6291 6172 207 0 0 0 chr5 10833061 10833084 -188797066 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2150 151 35 14 chr5 10833084 10833383 -188796767 - L1MA8 LINE L1 -119 6172 5860 1562 183 3 21 chr5 10835203 10835524 -188794626 + AluJb SINE Alu 1 316 0 1565 177 0 28 chr5 10836735 10837018 -188793132 + AluJb SINE Alu 22 296 -16 2091 132 24 32 chr5 10837230 10837608 -188792542 + THE1C LTR MaLR 1 375 0 564 251 84 6 chr5 10837775 10837948 -188792202 + MIR SINE MIR 64 253 -9 240 59 0 0 chr5 10838719 10838753 -188791397 + (CACCAT)n Simple_repeat Simple_repeat 2 35 0 225 310 141 49 chr5 10838876 10839060 -188791090 - MIR3 SINE MIR -5 203 3 198 303 30 0 chr5 10839221 10839287 -188790863 + MIR SINE MIR 54 121 -87 2094 127 43 0 chr5 10839933 10840232 -188789918 - AluSx SINE Alu 0 312 1 2328 70 0 0 chr5 10840346 10840651 -188789499 - AluY SINE Alu 0 305 1 231 242 21 74 chr5 10841252 10841347 -188788803 - MIR SINE MIR -70 192 103 1841 114 4 15 chr5 10842548 10842821 -188787329 - AluSx SINE Alu -27 285 16 1452 168 27 8 chr5 10842821 10843082 -188787068 + AluSx SINE Alu 41 307 -5 22 35 0 0 chr5 10843168 10843197 -188786953 + AT_rich Low_complexity Low_complexity 1 29 0 223 315 44 66 chr5 10844717 10844779 -188785371 - MER5A DNA MER1_type 0 189 127 2088 112 10 27 chr5 10844779 10845075 -188785075 + AluSq SINE Alu 1 291 -22 223 315 44 66 chr5 10845075 10845191 -188784959 - MER5A DNA MER1_type -62 127 1 634 222 119 0 chr5 10845554 10845730 -188784420 - MER58A DNA MER1_type -27 197 1 244 281 31 0 chr5 10845768 10845832 -188784318 + L2 LINE L2 3234 3299 -14 999 174 46 0 chr5 10846044 10846240 -188783910 + MER2 DNA MER2_type 6 210 -135 2229 47 0 0 chr5 10846432 10846690 -188783460 + AluY SINE Alu 40 297 -14 271 0 51 0 chr5 10846704 10846743 -188783407 + (TTTTTG)n Simple_repeat Simple_repeat 2 42 0 186 227 239 23 chr5 10846805 10846893 -188783257 - MER5A DNA MER1_type -43 146 40 1310 197 29 65 chr5 10847683 10848068 -188782082 + MER93b LTR ERV1 1 371 -2 225 338 104 19 chr5 10850805 10850959 -188779191 - MIR SINE MIR -19 243 77 196 275 0 0 chr5 10850986 10851026 -188779124 - L2 LINE L2 -18 3295 3256 456 155 10 10 chr5 10851066 10851163 -188778987 - MER53 DNA DNA -92 97 1 785 275 42 21 chr5 10853566 10853806 -188776344 + MIR SINE MIR 8 252 -10 26 50 0 0 chr5 10854105 10854145 -188776005 + AT_rich Low_complexity Low_complexity 1 40 0 259 207 0 35 chr5 10855863 10855921 -188774229 + GA-rich Low_complexity Low_complexity 3 58 0 399 73 0 0 chr5 10857461 10857516 -188772634 + (CA)n Simple_repeat Simple_repeat 1 55 0 280 0 50 0 chr5 10857930 10857970 -188772180 + (TA)n Simple_repeat Simple_repeat 1 42 0 180 216 0 0 chr5 10858364 10858415 -188771735 + A-rich Low_complexity Low_complexity 1 51 0 364 278 295 0 chr5 10859022 10859195 -188770955 - MIR SINE MIR -38 224 1 398 237 45 13 chr5 10862053 10862209 -188767941 + (TA)n Simple_repeat Simple_repeat 2 162 0 1051 249 114 79 chr5 10862209 10862967 -188767183 + LTR1B LTR ERV1 1 983 -37 400 257 9 9 chr5 10863016 10863121 -188767029 + LTR28 LTR ERV1 916 1020 0 314 260 21 21 chr5 10863128 10863224 -188766926 + L1MC4 LINE L1 6614 6709 -1333 22 35 0 0 chr5 10863329 10863358 -188766792 + AT_rich Low_complexity Low_complexity 1 29 0 263 284 71 55 chr5 10865617 10865744 -188764406 - L2 LINE L2 -18 3295 3167 321 254 0 0 chr5 10865817 10865888 -188764262 - MER33 DNA MER1_type 0 363 293 1987 134 0 7 chr5 10865901 10866222 -188763928 + AluSx SINE Alu 1 319 0 289 160 266 11 chr5 10866268 10866362 -188763788 - MER33 DNA MER1_type -205 119 2 2400 227 6 52 chr5 10866620 10867249 -188762901 + MER77 LTR ERV1 6 605 0 27 0 0 0 chr5 10868586 10868613 -188761537 + AT_rich Low_complexity Low_complexity 1 27 0 338 108 15 0 chr5 10868614 10868679 -188761471 + (TCTA)n Simple_repeat Simple_repeat 1 66 0 958 170 0 0 chr5 10868696 10868837 -188761313 - AluJo SINE Alu -171 141 1 1058 195 47 9 chr5 10869014 10869229 -188760921 + MER58A DNA MER1_type 2 224 0 1262 69 17 0 chr5 10869323 10869628 -188760522 + (GGAAA)n Simple_repeat Simple_repeat 1 310 0 413 315 170 16 chr5 10870790 10871251 -188758899 - L2 LINE L2 -28 3285 2752 441 161 136 0 chr5 10871252 10871382 -188758768 - MER58B DNA MER1_type -4 337 181 432 338 118 12 chr5 10871576 10871975 -188758175 - L2 LINE L2 -722 2592 2152 226 324 103 80 chr5 10874545 10874857 -188755293 + L2 LINE L2 2954 3272 0 313 333 54 42 chr5 10875364 10875568 -188754582 + MIR SINE MIR 8 214 -48 2228 97 3 0 chr5 10877218 10877516 -188752634 + AluSq SINE Alu 1 299 -14 1500 194 89 23 chr5 10881423 10881814 -188748336 + MER96B DNA MER1_type 1 417 0 287 293 99 5 chr5 10882045 10882257 -188747893 + MLT1L LTR MaLR 367 598 -17 2396 77 0 0 chr5 10882590 10882888 -188747262 - AluY SINE Alu -13 298 1 260 373 40 17 chr5 10883002 10883179 -188746971 - MIR3 SINE MIR -7 201 21 715 202 50 15 chr5 10883306 10883504 -188746646 - MER3 DNA MER1_type -4 205 1 2132 177 57 7 chr5 10883899 10884305 -188745845 + MSTB LTR MaLR 1 426 0 2101 243 40 29 chr5 10884600 10885325 -188744825 - L1ME1 LINE L1 -4 6162 5430 227 154 218 26 chr5 10885330 10885408 -188744742 - L1ME1 LINE L1 -828 5346 5254 1270 242 49 20 chr5 10885459 10885951 -188744199 - L1ME1 LINE L1 -898 5248 4743 604 305 40 22 chr5 10886074 10886300 -188743850 + L2 LINE L2 3076 3305 -8 25 51 0 0 chr5 10887393 10887432 -188742718 + AT_rich Low_complexity Low_complexity 1 39 0 315 0 0 0 chr5 10890823 10890858 -188739292 + (TG)n Simple_repeat Simple_repeat 1 35 0 1630 233 29 16 chr5 10891402 10891848 -188738302 + MLT1C LTR MaLR 16 467 0 229 186 0 0 chr5 10891909 10891952 -188738198 + MER81 DNA DNA 71 113 -1 187 341 110 0 chr5 10892814 10892896 -188737254 + L2 LINE L2 3173 3263 -9 1051 314 26 30 chr5 10892899 10893466 -188736684 + L1MC4a LINE L1 5398 5962 -1846 338 325 118 19 chr5 10893818 10894030 -188736120 + L1MC4a LINE L1 6414 6646 -1162 1511 232 55 110 chr5 10894058 10895274 -188734876 + L1MC5 LINE L1 6749 7897 -64 197 379 97 0 chr5 10895416 10895519 -188734631 + L2 LINE L2 3160 3272 0 917 260 22 30 chr5 10897552 10898015 -188732135 + MLT1H1 LTR MaLR 4 521 -34 468 0 0 0 chr5 10898143 10898195 -188731955 + (TG)n Simple_repeat Simple_repeat 1 52 0 1703 199 0 13 chr5 10898226 10898533 -188731617 + AluJo SINE Alu 1 303 -9 570 187 187 28 chr5 10900556 10900738 -188729412 - MER20 DNA MER1_type -8 211 1 1378 22 0 22 chr5 10900741 10900925 -188729225 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 180 0 0 0 chr5 10900925 10900945 -188729205 + (CAGA)n Simple_repeat Simple_repeat 1 20 0 200 211 0 0 chr5 10900945 10900983 -188729167 + (CATA)n Simple_repeat Simple_repeat 3 40 0 2364 98 0 16 chr5 10901995 10902302 -188727848 - AluSg SINE Alu -8 302 1 202 279 58 58 chr5 10903154 10903258 -188726892 - MIR3 SINE MIR 0 208 105 207 100 0 0 chr5 10904669 10904699 -188725451 + (A)n Simple_repeat Simple_repeat 1 30 0 2483 80 0 0 chr5 10904820 10905131 -188725019 + AluY SINE Alu 1 311 0 216 286 26 26 chr5 10907091 10907168 -188722982 - MIR SINE MIR -79 183 107 614 315 136 33 chr5 10907535 10908173 -188721977 + L2 LINE L2 2181 2884 -430 286 322 103 21 chr5 10908215 10908457 -188721693 + L2 LINE L2 2888 3149 -164 243 159 0 0 chr5 10908562 10908606 -188721544 + L1MA9 LINE L1 6230 6273 -39 294 284 77 0 chr5 10908639 10908794 -188721356 - HERVL74 LTR ERVL -3751 1934 1768 240 244 98 12 chr5 10908866 10908948 -188721202 + L2 LINE L2 3189 3277 -36 444 254 273 5 chr5 10909644 10909849 -188720301 + MIR SINE MIR 2 261 -1 359 241 68 2 chr5 10909995 10910203 -188719947 + L1ME3A LINE L1 5647 5885 -285 191 309 73 109 chr5 10910437 10910767 -188719383 + L2 LINE L2 2950 3267 -5 28 29 0 0 chr5 10911229 10911264 -188718886 + AT_rich Low_complexity Low_complexity 1 35 0 288 0 0 0 chr5 10912453 10912485 -188717665 + (CA)n Simple_repeat Simple_repeat 1 32 0 1270 257 54 28 chr5 10912589 10913123 -188717027 + MER74B LTR ERVL 69 616 -6 232 281 0 0 chr5 10913380 10913505 -188716645 + (CA)n Simple_repeat Simple_repeat 1 125 0 647 206 217 0 chr5 10913539 10913714 -188716436 + MIR SINE MIR 45 257 -5 2560 175 24 42 chr5 10915276 10915853 -188714297 + L1MB7 LINE L1 5618 6184 0 2954 72 0 5 chr5 10916154 10916543 -188713607 + L1PA8 LINE L1 5784 6170 -2 28 29 0 0 chr5 10916561 10916596 -188713554 + AT_rich Low_complexity Low_complexity 1 35 0 24 32 0 0 chr5 10916799 10916830 -188713320 + AT_rich Low_complexity Low_complexity 1 31 0 216 316 61 10 chr5 10918320 10918418 -188711732 + MIR SINE MIR 32 134 -128 340 333 23 0 chr5 10919413 10919542 -188710608 + MIR SINE MIR 39 170 -92 2118 120 3 0 chr5 10919913 10920229 -188709921 - AluSx SINE Alu 0 317 1 267 357 25 19 chr5 10921563 10921720 -188708430 + MIR SINE MIR 90 247 -15 559 234 3 6 chr5 10922799 10923154 -188706996 + (CCA)n Simple_repeat Simple_repeat 1 353 0 648 263 122 10 chr5 10923511 10923716 -188706434 - MIR SINE MIR -22 240 13 357 280 19 28 chr5 10923945 10924052 -188706098 - MIR SINE MIR -67 141 36 1990 128 22 10 chr5 10925472 10925784 -188704366 + L1PA8A LINE L1 5816 6131 0 21 0 0 0 chr5 10925916 10925937 -188704213 + AT_rich Low_complexity Low_complexity 1 21 0 2643 20 13 10 chr5 10926595 10926900 -188703250 + AluYa5 SINE Alu 1 306 -5 2056 167 5 32 chr5 10927467 10927838 -188702312 - MER46B DNA MER2_type 0 236 1 489 286 119 5 chr5 10929684 10929880 -188700270 + MIR SINE MIR 37 251 -11 22 0 0 0 chr5 10930873 10930895 -188699255 + AT_rich Low_complexity Low_complexity 1 22 0 937 200 56 37 chr5 10931636 10931851 -188698299 + MER20 DNA MER1_type 1 219 0 1562 201 19 46 chr5 10932695 10932907 -188697243 - MLT1A1 LTR MaLR -6 359 160 2517 57 0 3 chr5 10932907 10933207 -188696943 - AluY SINE Alu -12 299 1 1562 201 19 46 chr5 10933207 10933363 -188696787 - MLT1A1 LTR MaLR -205 160 1 1638 262 16 26 chr5 10933799 10934306 -188695844 - L1 LINE L1 -3004 3142 2641 203 278 0 0 chr5 10935303 10935357 -188694793 - MIR SINE MIR -124 138 85 2094 128 0 13 chr5 10935663 10935968 -188694182 + AluSg SINE Alu 2 302 -8 515 316 76 24 chr5 10936447 10936965 -188693185 - L1ME LINE L1 -502 5664 5116 935 305 63 50 chr5 10939417 10940080 -188690070 + L2 LINE L2 2210 2881 -433 357 254 53 95 chr5 10940118 10940307 -188689843 + L2 LINE L2 3108 3288 -25 443 237 142 24 chr5 10940820 10940989 -188689161 + MIR SINE MIR 63 251 -11 2162 62 44 0 chr5 10941085 10941419 -188688731 + AluY SINE Alu 1 346 0 1956 136 4 0 chr5 10941970 10942249 -188687901 + AluSg SINE Alu 1 280 -30 308 164 15 0 chr5 10942981 10943048 -188687102 + (TA)n Simple_repeat Simple_repeat 1 68 0 423 56 0 0 chr5 10943052 10943106 -188687044 + (TCTA)n Simple_repeat Simple_repeat 3 56 0 24 32 0 0 chr5 10943647 10943678 -188686472 + AT_rich Low_complexity Low_complexity 1 31 0 264 288 81 119 chr5 10943794 10944079 -188686071 - L2 LINE L2 -1 3271 2998 2743 283 73 44 chr5 10944268 10945977 -188684173 - L2 LINE L2 -3 3310 1559 214 206 29 0 chr5 10948485 10948553 -188681597 + CT-rich Low_complexity Low_complexity 1 70 0 26 30 0 0 chr5 10948616 10948649 -188681501 + AT_rich Low_complexity Low_complexity 1 33 0 338 285 173 17 chr5 10949025 10949320 -188680830 + L1ME4a LINE L1 5728 6068 -53 27 29 0 0 chr5 10949345 10949379 -188680771 + AT_rich Low_complexity Low_complexity 1 34 0 942 214 68 10 chr5 10950579 10950785 -188679365 + MER58A DNA MER1_type 7 224 0 589 249 62 8 chr5 10950943 10951130 -188679020 + MIR SINE MIR 42 243 -19 2254 118 16 0 chr5 10952266 10952572 -188677578 - AluSx SINE Alu -1 311 1 1697 238 118 19 chr5 10957011 10957494 -188672656 + MER77 LTR ERV1 54 584 -21 204 234 47 16 chr5 10958248 10958312 -188671838 + GA-rich Low_complexity Low_complexity 1 66 0 483 267 45 11 chr5 10958431 10958607 -188671543 - L1MA9 LINE L1 -30 6282 6101 26 30 0 0 chr5 10959074 10959107 -188671043 + AT_rich Low_complexity Low_complexity 1 33 0 3645 116 0 15 chr5 10959107 10959633 -188670517 - L1PB1 LINE L1 0 6151 5634 2481 62 0 0 chr5 10960309 10960600 -188669550 + AluY SINE Alu 1 291 -20 25 75 0 0 chr5 10961682 10961735 -188668415 + AT_rich Low_complexity Low_complexity 1 53 0 181 242 0 0 chr5 10963317 10963350 -188666800 + MIR SINE MIR 206 238 -24 262 221 23 107 chr5 10963510 10963641 -188666509 - L3 LINE CR1 -689 888 769 4838 97 14 0 chr5 10963885 10964514 -188665636 + L1PA11 LINE L1 5537 6174 0 3344 203 23 5 chr5 10968081 10968701 -188661449 - MER82 DNA MER2_type 0 653 23 236 65 43 0 chr5 10970150 10970196 -188659954 + T-rich Low_complexity Low_complexity 2 180 0 2192 95 0 3 chr5 10970196 10970480 -188659670 - AluY SINE Alu -1 328 1 202 306 35 12 chr5 10972506 10972591 -188657559 + MIR3 SINE MIR 103 189 -19 2631 46 0 0 chr5 10972825 10973131 -188657019 - AluY SINE Alu -5 306 1 1751 233 99 42 chr5 10974121 10974674 -188655476 + MLT1E LTR MaLR 7 591 -2 25 0 0 0 chr5 10974712 10974737 -188655413 + AT_rich Low_complexity Low_complexity 1 25 0 23 33 0 0 chr5 10974768 10974798 -188655352 + AT_rich Low_complexity Low_complexity 1 30 0 24 85 0 0 chr5 10975377 10975436 -188654714 + AT_rich Low_complexity Low_complexity 1 59 0 5580 114 10 2 chr5 10977094 10977919 -188652231 + L1PA13 LINE L1 5333 6163 0 1119 203 14 27 chr5 10978910 10979132 -188651018 - MER20 DNA MER1_type 0 219 1 23 33 0 0 chr5 10979428 10979458 -188650692 + AT_rich Low_complexity Low_complexity 1 30 0 301 284 97 30 chr5 10979999 10980133 -188650017 + MER5A DNA MER1_type 18 160 -29 282 228 81 87 chr5 10980014 10980163 -188649987 - MER5A DNA MER1_type -24 165 18 * 1087 224 72 36 chr5 10980355 10980686 -188649464 - MER2 DNA MER2_type 0 344 2 1575 39 0 0 chr5 10981125 10981303 -188648847 + L1PA4 LINE L1 5975 6152 -3 2242 105 0 3 chr5 10982041 10982336 -188647814 - AluSg SINE Alu -16 294 1 272 158 129 109 chr5 10982866 10982967 -188647183 - MIR SINE MIR -76 186 84 2209 96 0 0 chr5 10983921 10984231 -188645919 - AluSg SINE Alu 0 310 1 295 304 36 9 chr5 10984440 10984552 -188645598 - MIR SINE MIR -114 148 34 225 294 209 35 chr5 10984795 10984996 -188645154 + MIR SINE MIR 15 250 -12 796 320 33 27 chr5 10985494 10985831 -188644319 + MLT1I LTR MaLR 71 409 0 1042 17 0 0 chr5 10986926 10987042 -188643108 - L1PA4 LINE L1 -6 6149 6034 292 293 97 27 chr5 10987651 10987951 -188642199 - L1ME4a LINE L1 -58 6063 5743 266 91 0 0 chr5 10988002 10988046 -188642104 + L1PA3 LINE L1 6112 6155 0 22 0 0 0 chr5 10988046 10988068 -188642082 + AT_rich Low_complexity Low_complexity 1 22 0 186 189 0 0 chr5 10988513 10988550 -188641600 + GA-rich Low_complexity Low_complexity 3 39 0 1906 125 45 3 chr5 10989866 10990154 -188639996 - AluSx SINE Alu -9 303 4 248 356 20 0 chr5 10990636 10990737 -188639413 + L2 LINE L2 3153 3255 -17 386 174 130 11 chr5 10991289 10991381 -188638769 - L1MC/D LINE L1 -2331 5477 5375 755 185 0 55 chr5 10991726 10991872 -188638278 + AluJo SINE Alu 11 148 -164 1224 208 94 29 chr5 10991873 10992215 -188637935 + THE1C LTR MaLR 3 366 -9 9526 135 40 44 chr5 10992234 10993816 -188636334 + THE1C-int LTR MaLR 3 1579 -1 1714 143 105 46 chr5 10993816 10994167 -188635983 + THE1C LTR MaLR 1 372 -3 873 192 12 35 chr5 10994170 10994342 -188635808 + AluJo SINE Alu 143 310 -2 210 211 307 26 chr5 10994441 10994555 -188635595 + MIR SINE MIR 117 262 0 860 224 29 24 chr5 10994946 10995156 -188634994 - MER20 DNA MER1_type -8 211 1 2233 118 3 10 chr5 10995860 10996173 -188633977 - AluSx SINE Alu -1 311 1 770 263 52 0 chr5 10997483 10997677 -188632473 + MER63A DNA MER1_type 1 204 -6 243 314 11 38 chr5 10998057 10998242 -188631908 + CT-rich Low_complexity Low_complexity 1 180 0 554 178 9 146 chr5 10999849 11000068 -188630082 + MER53 DNA DNA 1 189 0 523 319 103 67 chr5 11000718 11000939 -188629211 + HAL1 LINE L1 885 1097 -1410 3038 115 2 9 chr5 11000939 11001402 -188628748 + L1PA8 LINE L1 5732 6191 0 523 319 103 67 chr5 11001402 11002012 -188628138 + HAL1 LINE L1 1097 1747 -760 704 241 32 27 chr5 11002158 11002378 -188627772 - MIR SINE MIR -11 251 31 24 0 0 0 chr5 11005377 11005401 -188624749 + AT_rich Low_complexity Low_complexity 1 24 0 1559 115 17 0 chr5 11006128 11006362 -188623788 + L1MC1 LINE L1 5947 6184 -149 349 310 76 38 chr5 11006970 11007154 -188622996 - L2 LINE L2 0 3313 3123 274 309 21 0 chr5 11007215 11007312 -188622838 - MIR SINE MIR -108 154 56 3371 152 9 0 chr5 11007589 11008122 -188622028 + L1MC1 LINE L1 5788 6325 -8 378 238 24 0 chr5 11008129 11008255 -188621895 + (TA)n Simple_repeat Simple_repeat 1 129 0 27 29 0 0 chr5 11008394 11008428 -188621722 + AT_rich Low_complexity Low_complexity 1 34 0 31 0 0 0 chr5 11008930 11008961 -188621189 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr5 11009090 11009111 -188621039 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 11009904 11009925 -188620225 + AT_rich Low_complexity Low_complexity 1 21 0 305 243 87 0 chr5 11010420 11010523 -188619627 - L2 LINE L2 -6 3307 3196 426 231 110 99 chr5 11010774 11010956 -188619194 + L2 LINE L2 3108 3291 -22 2095 118 3 7 chr5 11010985 11011272 -188618878 - AluSx SINE Alu -26 286 1 672 222 60 0 chr5 11012510 11012677 -188617473 - MIR SINE MIR -22 240 64 660 247 60 47 chr5 11012966 11013201 -188616949 + MER74A LTR ERVL 11 248 -310 183 275 43 29 chr5 11014411 11014480 -188615670 + L2 LINE L2 3160 3229 -84 521 209 0 0 chr5 11015538 11015648 -188614502 - MER53 DNA DNA -9 180 71 204 211 0 0 chr5 11016299 11016337 -188613813 + (TG)n Simple_repeat Simple_repeat 1 38 0 23 0 0 0 chr5 11017029 11017052 -188613098 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 11018542 11018563 -188611587 + AT_rich Low_complexity Low_complexity 1 21 0 2409 85 7 0 chr5 11018861 11019166 -188610984 + AluSg SINE Alu 1 307 -3 244 379 107 22 chr5 11019301 11019665 -188610485 - L2 LINE L2 0 3313 2919 21 0 0 0 chr5 11020266 11020287 -188609863 + AT_rich Low_complexity Low_complexity 1 21 0 2540 71 0 0 chr5 11022650 11022960 -188607190 + AluY SINE Alu 1 310 -1 227 287 77 107 chr5 11023499 11023799 -188606351 + L2 LINE L2 2933 3223 -49 2341 84 0 0 chr5 11024189 11024504 -188605646 - AluSq SINE Alu 0 315 1 459 308 137 12 chr5 11024719 11025047 -188605103 - L2 LINE L2 0 3313 2945 209 387 0 0 chr5 11025155 11025230 -188604920 - L2 LINE L2 0 3313 3239 229 224 45 15 chr5 11025266 11025333 -188604817 + MER116 DNA Mariner 6 74 -6 981 143 65 32 chr5 11026551 11026767 -188603383 + L1MA8 LINE L1 6068 6290 -1 266 359 36 36 chr5 11027249 11027444 -188602706 - MIR SINE MIR -48 214 20 252 0 0 0 chr5 11027984 11028012 -188602138 + (TA)n Simple_repeat Simple_repeat 2 29 0 2081 193 19 61 chr5 11028806 11029329 -188600821 - MLT1D LTR MaLR -4 501 1 2090 161 24 0 chr5 11029370 11029706 -188600444 + MER2 DNA MER2_type 1 344 0 1767 197 33 0 chr5 11029964 11030294 -188599856 - MER47B DNA MER2_type -76 342 2 261 235 286 25 chr5 11030992 11031111 -188599039 - L2 LINE L2 0 3272 3123 260 172 46 0 chr5 11031146 11031233 -188598917 + (CA)n Simple_repeat Simple_repeat 1 91 0 603 204 65 117 chr5 11032731 11032962 -188597188 + MER20 DNA MER1_type 1 219 0 267 357 25 19 chr5 11034209 11034366 -188595784 - MIR SINE MIR -15 247 90 2013 121 7 7 chr5 11035696 11035985 -188594165 + AluSx SINE Alu 1 289 -23 340 333 23 0 chr5 11036388 11036517 -188593633 - MIR SINE MIR -92 170 39 206 316 61 10 chr5 11037451 11037549 -188592601 - MIR SINE MIR -128 134 32 24 32 0 0 chr5 11039039 11039070 -188591080 + AT_rich Low_complexity Low_complexity 1 31 0 2041 79 4 8 chr5 11039166 11039433 -188590717 + AluYa5 SINE Alu 38 303 -8 515 316 76 24 chr5 11039912 11040430 -188589720 - L1ME LINE L1 -502 5664 5116 935 305 63 50 chr5 11042881 11043544 -188586606 + L2 LINE L2 2210 2881 -433 357 254 53 95 chr5 11043582 11043771 -188586379 + L2 LINE L2 3108 3288 -25 443 237 142 24 chr5 11044284 11044453 -188585697 + MIR SINE MIR 63 251 -11 2162 62 44 0 chr5 11044549 11044883 -188585267 + AluY SINE Alu 1 346 0 1956 136 4 0 chr5 11045435 11045714 -188584436 + AluSg SINE Alu 1 280 -30 299 167 15 0 chr5 11046446 11046512 -188583638 + (TA)n Simple_repeat Simple_repeat 2 68 0 423 56 0 0 chr5 11046517 11046571 -188583579 + (TCTA)n Simple_repeat Simple_repeat 3 56 0 24 32 0 0 chr5 11047113 11047144 -188583006 + AT_rich Low_complexity Low_complexity 1 31 0 264 288 81 119 chr5 11047260 11047545 -188582605 - L2 LINE L2 -1 3271 2998 2223 283 64 35 chr5 11047734 11049105 -188581045 - L2 LINE L2 -3 3310 1907 470 215 54 0 chr5 11049906 11049999 -188580151 + MER5A DNA MER1_type 7 104 -85 21 0 0 0 chr5 11050130 11050151 -188579999 + AT_rich Low_complexity Low_complexity 1 21 0 365 303 76 0 chr5 11052726 11052871 -188577279 - L2 LINE L2 -2 3311 3156 2215 226 29 6 chr5 11053138 11053659 -188576491 + L1MC3 LINE L1 7234 7766 -19 2225 123 0 0 chr5 11053666 11053975 -188576175 + AluSx SINE Alu 1 309 -3 2117 112 20 3 chr5 11054842 11055138 -188575012 + AluSq SINE Alu 5 305 -8 1364 225 61 48 chr5 11056376 11056490 -188573660 + MLT1C LTR MaLR 4 115 -352 1958 145 148 19 chr5 11056490 11056869 -188573281 + MSTA LTR MaLR 1 428 0 1364 225 61 48 chr5 11056869 11057212 -188572938 + MLT1C LTR MaLR 115 467 0 429 145 0 0 chr5 11057560 11057629 -188572521 + MER116 DNA Mariner 6 74 -6 1071 246 18 0 chr5 11057632 11057852 -188572298 + MER58A DNA MER1_type 1 224 0 314 128 21 0 chr5 11058134 11058181 -188571969 + MLT1C LTR MaLR 343 390 -77 241 281 91 18 chr5 11059524 11059860 -188570290 - LTR33 LTR ERVL -9 512 83 698 256 81 20 chr5 11060206 11060452 -188569698 - MIR SINE MIR 0 262 2 385 268 75 10 chr5 11060957 11061167 -188568983 + MLT1H1 LTR MaLR 2 181 -374 418 271 133 18 chr5 11061204 11061370 -188568780 + MLT1H1 LTR MaLR 371 555 0 22 35 0 0 chr5 11062076 11062105 -188568045 + AT_rich Low_complexity Low_complexity 1 29 0 23 54 0 0 chr5 11063027 11063064 -188567086 + AT_rich Low_complexity Low_complexity 1 37 0 207 185 0 108 chr5 11063345 11063410 -188566740 + MER5B DNA MER1_type 12 69 -109 205 400 9 0 chr5 11064265 11064375 -188565775 + L2 LINE L2 3145 3255 -17 188 402 51 8 chr5 11064486 11064603 -188565547 + L3b LINE CR1 1455 1576 -7 2224 85 0 69 chr5 11064835 11065153 -188564997 - AluSx SINE Alu -16 296 1 995 82 48 0 chr5 11067142 11067288 -188562862 - MER41A LTR ERV1 0 554 402 2301 116 0 0 chr5 11068895 11069197 -188560953 + AluSx SINE Alu 1 302 -10 1833 202 26 19 chr5 11071506 11071927 -188558223 - L1MB8 LINE L1 -1 6177 5754 656 122 2 2 chr5 11072162 11072269 -188557881 - Tigger4(Zombi) DNA MER2_type 0 2731 2625 475 204 0 0 chr5 11072258 11072346 -188557804 - Tigger4(Zombi) DNA MER2_type -2643 88 1 * 351 233 38 60 chr5 11072688 11072821 -188557329 - L2 LINE L2 0 3313 3184 2204 95 3 29 chr5 11072873 11073188 -188556962 + AluY SINE Alu 1 307 -4 180 0 0 0 chr5 11073415 11073435 -188556715 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 336 285 86 106 chr5 11077737 11078084 -188552066 + L1M2 LINE L1 897 1235 -5614 216 0 0 0 chr5 11078084 11078108 -188552042 + (CGCGG)n Simple_repeat Simple_repeat 1 24 0 336 285 86 106 chr5 11078108 11078202 -188551948 + L1M2 LINE L1 1235 1329 -5520 180 0 0 0 chr5 11078883 11078903 -188551247 + (TCC)n Simple_repeat Simple_repeat 1 20 0 198 320 0 0 chr5 11081090 11081140 -188549010 + MIR SINE MIR 87 136 -72 611 275 58 116 chr5 11083819 11084006 -188546144 + MLT1J LTR MaLR 119 270 -241 2202 123 0 0 chr5 11084006 11084307 -188545843 + AluSx SINE Alu 1 301 -11 611 275 58 116 chr5 11084307 11084533 -188545617 + MLT1J LTR MaLR 270 508 -3 288 368 56 52 chr5 11084675 11084944 -188545206 - L2 LINE L2 -35 3237 2968 1651 165 18 107 chr5 11085070 11085471 -188544679 - MLT1A1 LTR MaLR 0 365 1 8304 198 57 31 chr5 11085471 11087163 -188542987 - MLT1A1-int LTR MaLR 0 1735 1 714 203 8 8 chr5 11087163 11087296 -188542854 - MLT1A1 LTR MaLR 0 365 233 394 266 90 34 chr5 11087377 11087610 -188542540 + L1ME LINE L1 3816 4061 -2085 386 289 100 54 chr5 11087845 11088946 -188541204 + L1ME LINE L1 4442 5617 -547 841 368 124 7 chr5 11089289 11090104 -188540046 - L2 LINE L2 -1481 1833 924 356 296 29 52 chr5 11090518 11090690 -188539460 + MER5B DNA MER1_type 22 178 0 668 310 21 8 chr5 11091626 11091868 -188538282 - MIR SINE MIR -3 259 15 554 157 90 2 chr5 11091893 11092065 -188538085 - MER58A DNA MER1_type -3 221 1 882 214 27 16 chr5 11092073 11092260 -188537890 - MER5A DNA MER1_type 0 189 1 25 0 0 0 chr5 11093096 11093121 -188537029 + AT_rich Low_complexity Low_complexity 1 25 0 497 278 32 27 chr5 11093411 11093598 -188536552 - MIR3 SINE MIR -13 195 8 396 0 0 0 chr5 11093667 11093711 -188536439 + (TG)n Simple_repeat Simple_repeat 2 45 0 624 62 0 0 chr5 11093719 11093800 -188536350 + (GGAGAA)n Simple_repeat Simple_repeat 1 81 0 509 279 191 38 chr5 11093811 11094151 -188535999 - MLT1J LTR MaLR -113 398 7 2007 129 57 48 chr5 11094559 11094931 -188535219 - THE1C LTR MaLR 0 375 1 293 308 97 44 chr5 11095925 11096152 -188533998 - MLT1J LTR MaLR -130 381 143 391 283 167 24 chr5 11096603 11096896 -188533254 - L1MEd LINE L1 -5150 969 635 475 231 106 60 chr5 11097153 11097435 -188532715 - L1MEd LINE L1 -5794 325 31 1388 189 79 4 chr5 11097962 11098227 -188531923 - AluJb SINE Alu -19 293 9 3112 74 13 2 chr5 11098702 11099095 -188531055 + L1PA13 LINE L1 5767 6163 0 453 293 135 83 chr5 11099097 11099352 -188530798 + L1ME4a LINE L1 5310 5551 -570 2366 61 0 0 chr5 11099352 11099677 -188530473 + AluY SINE Alu 1 325 0 453 293 135 83 chr5 11099677 11100007 -188530143 + L1ME4a LINE L1 5551 5926 -195 1521 174 30 0 chr5 11100047 11100312 -188529838 + MER2 DNA MER2_type 1 273 -72 198 333 20 0 chr5 11100507 11100558 -188529592 - MER5A DNA MER1_type -65 124 73 23 0 0 0 chr5 11101280 11101303 -188528847 + AT_rich Low_complexity Low_complexity 1 23 0 797 295 172 12 chr5 11101619 11102043 -188528107 - L2 LINE L2 -1012 2302 1811 25 0 0 0 chr5 11102047 11102072 -188528078 + AT_rich Low_complexity Low_complexity 1 25 0 407 221 110 8 chr5 11102107 11102234 -188527916 - Zaphod DNA AcHobo -10 4021 3882 509 212 0 0 chr5 11102237 11102336 -188527814 + L1MD2 LINE L1 6240 6338 -21 267 247 27 27 chr5 11102383 11102456 -188527694 - MER115 DNA AcHobo -144 549 477 717 255 13 0 chr5 11102464 11102621 -188527529 - MER45A DNA AcHobo -1 177 19 444 195 234 8 chr5 11102645 11102773 -188527377 - LTR52 LTR ERVL -264 157 1 562 279 113 26 chr5 11102781 11103046 -188527104 + L2 LINE L2 3005 3292 -21 424 224 129 99 chr5 11105014 11105092 -188525058 + MLT1I LTR MaLR 107 181 -228 1334 167 139 0 chr5 11105092 11105350 -188524800 + AluJb SINE Alu 1 294 -18 424 224 129 99 chr5 11105350 11105543 -188524607 + MLT1I LTR MaLR 181 386 -23 1741 184 10 0 chr5 11105686 11105985 -188524165 + AluJo SINE Alu 1 302 -10 21 71 0 0 chr5 11107024 11107066 -188523084 + AT_rich Low_complexity Low_complexity 1 42 0 635 290 43 90 chr5 11107135 11107631 -188522519 - MLT1J2 LTR MaLR -8 442 1 198 250 21 0 chr5 11108020 11108068 -188522082 - L2 LINE L2 0 3313 3265 1789 203 109 106 chr5 11108543 11109348 -188520802 + Charlie2 DNA MER1_type 1874 2684 -178 8080 29 5 0 chr5 11109348 11110497 -188519653 + L1PA4 LINE L1 5000 6152 -3 1789 203 109 106 chr5 11110497 11110644 -188519506 + Charlie2 DNA MER1_type 2684 2829 -33 244 203 0 127 chr5 11110784 11110832 -188519318 - MER46C DNA MER2_type -66 272 236 1253 247 108 44 chr5 11110832 11111350 -188518800 + MLT1H1 LTR MaLR 1 551 -4 244 203 0 127 chr5 11111350 11111380 -188518770 - MER46C DNA MER2_type -102 236 204 471 224 22 48 chr5 11111672 11111817 -188518333 - MIR SINE MIR -36 172 31 3218 110 0 5 chr5 11112069 11112155 -188517995 + L1PB1 LINE L1 5708 5793 -358 333 0 0 0 chr5 11112155 11112192 -188517958 + (CA)n Simple_repeat Simple_repeat 2 38 0 3218 110 0 5 chr5 11112192 11112549 -188517601 + L1PB1 LINE L1 5793 6149 -2 578 127 0 32 chr5 11112608 11112734 -188517416 + (TA)n Simple_repeat Simple_repeat 1 122 0 891 193 37 6 chr5 11113767 11113928 -188516222 + FRAM SINE Alu 1 160 -16 2335 79 0 0 chr5 11113931 11114241 -188515909 + AluSc SINE Alu 1 310 0 1061 289 73 35 chr5 11115449 11115941 -188514209 - MLT1J LTR MaLR 0 511 1 247 293 49 12 chr5 11116593 11116675 -188513475 + MIR SINE MIR 33 117 -91 20531 25 0 0 chr5 11116861 11119903 -188510247 - L1PA3 LINE L1 -3 6152 3100 586 267 85 6 chr5 11120567 11120743 -188509407 + MIR SINE MIR 18 207 -55 2011 135 3 3 chr5 11121353 11121650 -188508500 + AluSq SINE Alu 2 298 -15 1814 157 17 0 chr5 11122887 11123048 -188507102 - AluJb SINE Alu -17 295 125 2220 101 3 3 chr5 11123048 11123344 -188506806 - AluSc SINE Alu -13 296 1 1814 157 17 0 chr5 11123344 11123469 -188506681 - AluJb SINE Alu -187 125 4 22 0 0 0 chr5 11123475 11123497 -188506653 + AT_rich Low_complexity Low_complexity 1 22 0 1715 241 165 44 chr5 11123693 11124334 -188505816 + L1ME3A LINE L1 4742 5304 -866 5344 78 0 0 chr5 11124334 11124997 -188505153 + L1PA8 LINE L1 5503 6165 -7 1715 241 165 44 chr5 11124997 11125624 -188504526 + L1ME3A LINE L1 5304 6165 -5 275 227 53 0 chr5 11126499 11126574 -188503576 - 7SK RNA RNA -100 93 15 485 92 41 0 chr5 11126579 11126677 -188503473 + (TA)n Simple_repeat Simple_repeat 1 102 0 2896 138 20 35 chr5 11126681 11126700 -188503450 - MER31A LTR ERV1 0 485 467 1453 165 12 92 chr5 11126700 11127028 -188503122 + AluJo SINE Alu 1 302 -10 2896 138 20 35 chr5 11127028 11127500 -188502650 - MER31A LTR ERV1 -18 467 1 238 246 15 0 chr5 11128761 11128826 -188501324 - L1MB4 LINE L1 0 6180 6115 253 286 0 0 chr5 11129607 11129684 -188500466 + L2 LINE L2 3235 3311 -2 330 293 14 21 chr5 11129862 11130002 -188500148 + CT-rich Low_complexity Low_complexity 3 141 0 1258 144 0 33 chr5 11130448 11130663 -188499487 - L1MA9 LINE L1 -5 6307 6100 24 53 0 0 chr5 11131113 11131151 -188498999 + AT_rich Low_complexity Low_complexity 1 38 0 299 180 66 0 chr5 11131453 11131514 -188498636 - L1MA9 LINE L1 -5 6307 6243 1156 199 5 23 chr5 11133078 11133299 -188496851 + MER58A DNA MER1_type 6 222 -2 2233 203 65 15 chr5 11133569 11134047 -188496103 - MLT1D LTR MaLR -3 502 1 342 0 0 0 chr5 11134574 11134612 -188495538 + (A)n Simple_repeat Simple_repeat 1 38 0 1956 158 78 45 chr5 11134623 11134778 -188495372 + MLT1B LTR MaLR 1 150 -240 2243 115 3 0 chr5 11134778 11135083 -188495067 + AluSx SINE Alu 5 310 -2 1956 158 78 45 chr5 11135083 11135301 -188494849 + MLT1B LTR MaLR 150 386 -4 375 188 83 21 chr5 11135346 11135442 -188494708 - LTR16A1 LTR ERVL -351 106 5 305 266 164 83 chr5 11137222 11137382 -188492768 - L2 LINE L2 -197 3116 2970 2512 195 74 55 chr5 11137382 11137925 -188492225 + MLT2B3 LTR ERVL 2 554 0 305 266 164 83 chr5 11137925 11138155 -188491995 - L2 LINE L2 -343 2970 2694 212 289 134 35 chr5 11138476 11138618 -188491532 + MIR3 SINE MIR 30 185 -23 2282 112 0 0 chr5 11138815 11139110 -188491040 + AluSx SINE Alu 1 295 -17 428 279 38 25 chr5 11139367 11139525 -188490625 + LTR67 LTR ERVL 29 188 -369 557 280 116 57 chr5 11139915 11140493 -188489657 - L1MC4a LINE L1 -1904 5904 5293 23 33 0 0 chr5 11140676 11140706 -188489444 + AT_rich Low_complexity Low_complexity 1 30 0 571 294 82 77 chr5 11140876 11141670 -188488480 + L1M4 LINE L1 4027 4824 -1322 600 263 53 13 chr5 11142110 11142262 -188487888 - MER5A DNA MER1_type 0 189 32 504 32 0 0 chr5 11142326 11142388 -188487762 + (CA)n Simple_repeat Simple_repeat 1 62 0 6684 205 25 100 chr5 11142599 11144648 -188485502 + L1M4 LINE L1 5 1934 -4712 1916 139 17 46 chr5 11144684 11145029 -188485121 + THE1B LTR MaLR 30 364 0 1836 154 4 4 chr5 11145029 11145309 -188484841 + AluJb SINE Alu 14 293 -19 586 274 95 21 chr5 11145314 11145841 -188484309 + L1M4 LINE L1 1926 2577 -4069 1510 180 92 30 chr5 11146661 11147061 -188483089 + MER69 DNA AcHobo 2089 2513 -13 1540 53 5 0 chr5 11147293 11147483 -188482667 - AluY SINE Alu -5 306 116 910 286 84 23 chr5 11147624 11148120 -188482030 - L2 LINE L2 -60 3253 2723 326 296 74 81 chr5 11148484 11149163 -188480987 - L1ME4a LINE L1 -43 6078 5405 2260 103 3 7 chr5 11149317 11149619 -188480531 - AluSg SINE Alu -9 301 1 993 123 54 74 chr5 11150943 11151146 -188479004 + MER20 DNA MER1_type 16 214 -5 185 300 33 0 chr5 11151853 11151913 -188478237 - MIR SINE MIR -73 189 128 240 231 77 87 chr5 11151943 11152047 -188478103 + MIR SINE MIR 94 196 -66 343 349 113 14 chr5 11152240 11152452 -188477698 + MIR SINE MIR 21 253 -9 502 295 136 30 chr5 11152877 11153216 -188476934 + L1ME LINE L1 5417 5791 -330 2432 97 0 0 chr5 11153537 11153845 -188476305 + AluSq SINE Alu 2 309 -4 498 149 0 0 chr5 11154729 11154816 -188475334 + (A)n Simple_repeat Simple_repeat 1 87 0 246 32 0 0 chr5 11154898 11154929 -188475221 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2686 185 92 7 chr5 11155297 11155882 -188474268 - L1MB4 LINE L1 -5 6175 5541 211 296 217 35 chr5 11156441 11156628 -188473522 - MIR3 SINE MIR -35 227 12 286 200 0 0 chr5 11156762 11156817 -188473333 - MIR SINE MIR -95 167 113 2327 100 0 3 chr5 11157717 11158017 -188472133 + AluSx SINE Alu 1 299 -13 249 260 0 27 chr5 11158646 11158719 -188471431 + 7SK RNA RNA 3 73 -120 369 62 0 0 chr5 11159085 11159133 -188471017 + (TA)n Simple_repeat Simple_repeat 1 48 0 1933 156 3 10 chr5 11159134 11159429 -188470721 - AluSx SINE Alu -19 293 1 447 19 0 0 chr5 11160857 11160909 -188469241 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 892 182 18 0 chr5 11161496 11161666 -188468484 - L1MD2 LINE L1 0 6359 6187 22 35 0 0 chr5 11162770 11162799 -188467351 + AT_rich Low_complexity Low_complexity 1 29 0 705 186 81 59 chr5 11163679 11163872 -188466278 - MER20 DNA MER1_type -2 217 19 1475 243 0 7 chr5 11163985 11164273 -188465877 - AluJo SINE Alu -26 286 1 6969 139 18 22 chr5 11164820 11165967 -188464183 - Tigger1 DNA MER2_type 0 2418 1276 16563 166 36 8 chr5 11165972 11165998 -188464152 - L1P5 LINE L1 -333 6534 6510 216 0 0 0 chr5 11165998 11166022 -188464128 + (TG)n Simple_repeat Simple_repeat 2 25 0 * 239 0 32 0 chr5 11166021 11166052 -188464098 + (TA)n Simple_repeat Simple_repeat 1 32 0 16563 166 36 8 chr5 11166022 11172360 -188457790 - L1P5 LINE L1 -357 6510 23 5322 145 44 35 chr5 11172367 11173313 -188456837 - Tigger1 DNA MER2_type -1463 955 1 494 207 21 7 chr5 11175654 11175799 -188454351 + CT-rich Low_complexity Low_complexity 1 147 0 378 266 319 35 chr5 11175806 11175865 -188454285 - L2 LINE L2 -11 3302 3261 3433 155 15 20 chr5 11175865 11176470 -188453680 - MER7C DNA MER2_type 0 602 1 378 266 319 35 chr5 11176470 11176692 -188453458 - L2 LINE L2 -52 3261 2941 1216 279 63 64 chr5 11176834 11177440 -188452710 - L2 LINE L2 -540 2774 2170 328 314 59 46 chr5 11177564 11177870 -188452280 - L1M4 LINE L1 -2314 3832 3523 396 329 121 22 chr5 11177892 11178123 -188452027 - MIR SINE MIR 0 262 9 425 336 60 20 chr5 11178192 11178442 -188451708 + MLT1K LTR MaLR 3 262 -326 310 276 65 65 chr5 11178487 11178701 -188451449 + MLT1K LTR MaLR 346 559 -29 186 350 0 30 chr5 11179876 11179976 -188450174 - MIR3 SINE MIR -5 203 107 28 71 0 0 chr5 11180999 11181055 -188449095 + AT_rich Low_complexity Low_complexity 1 56 0 26 0 0 0 chr5 11182778 11182804 -188447346 + AT_rich Low_complexity Low_complexity 1 26 0 494 272 166 34 chr5 11183392 11183657 -188446493 + L2 LINE L2 3014 3313 0 856 276 83 21 chr5 11185038 11185422 -188444728 + MLT1J2 LTR MaLR 41 448 -2 1673 191 14 11 chr5 11185598 11185965 -188444185 - L1MB3 LINE L1 -3 6180 5813 252 143 0 0 chr5 11185965 11186007 -188444143 - L1M3 LINE L1 -329 5854 5813 268 119 0 0 chr5 11186007 11186049 -188444101 - L1M3 LINE L1 -329 5854 5813 1946 176 8 8 chr5 11186049 11186424 -188443726 - L1MB3 LINE L1 -329 5854 5480 22 0 0 0 chr5 11186995 11187017 -188443133 + AT_rich Low_complexity Low_complexity 1 22 0 828 257 13 29 chr5 11187488 11188000 -188442150 + L1ME2 LINE L1 5493 6102 -62 333 257 0 73 chr5 11188201 11188310 -188441840 + L1ME4a LINE L1 5264 5364 -2444 398 297 57 31 chr5 11188364 11188556 -188441594 + L1ME4a LINE L1 5257 5453 -2355 223 186 0 0 chr5 11188584 11188627 -188441523 + T-rich Low_complexity Low_complexity 1 43 0 356 176 14 54 chr5 11188849 11188923 -188441227 + L2 LINE L2 3236 3306 -7 1126 216 53 104 chr5 11189055 11189486 -188440664 - MLT2B1 LTR ERVL 0 414 6 297 321 0 0 chr5 11189491 11189597 -188440553 + L1ME4a LINE L1 5568 5673 -448 387 280 95 43 chr5 11189658 11189962 -188440188 + L1ME4a LINE L1 5761 6080 -41 1799 171 53 8 chr5 11190274 11190648 -188439502 + L1MB2 LINE L1 5777 6167 -4 884 259 21 13 chr5 11190877 11191113 -188439037 - MIR SINE MIR 0 262 25 421 293 140 6 chr5 11191132 11191289 -188438861 - MER5A DNA MER1_type -3 186 9 22 35 0 0 chr5 11192733 11192762 -188437388 + AT_rich Low_complexity Low_complexity 1 29 0 2448 53 0 47 chr5 11192786 11193106 -188437044 - AluY SINE Alu -6 305 1 1347 247 130 61 chr5 11193321 11193889 -188436261 + MLT1E2 LTR MaLR 1 624 0 309 191 40 91 chr5 11194550 11194727 -188435423 - MLT1H LTR MaLR 0 525 325 474 277 61 19 chr5 11194795 11195008 -188435142 - MLT1H LTR MaLR -325 224 3 405 342 53 30 chr5 11195016 11195317 -188434833 - MLT1I LTR MaLR -65 344 37 21 82 0 0 chr5 11196058 11196107 -188434043 + AT_rich Low_complexity Low_complexity 1 49 0 1384 213 62 37 chr5 11196438 11196842 -188433308 + MLT1C LTR MaLR 41 461 -6 248 227 297 16 chr5 11197544 11197672 -188432478 - MIR SINE MIR -11 251 88 785 221 147 78 chr5 11197675 11198207 -188431943 - MLT1E3 LTR MaLR 0 624 1 446 254 16 32 chr5 11198386 11198512 -188431638 + MIR SINE MIR 118 241 -21 382 308 87 36 chr5 11199421 11199755 -188430395 + L1MC3 LINE L1 2173 2523 -3873 206 326 35 23 chr5 11199820 11199906 -188430244 - L2 LINE L2 -9 3263 3177 16208 201 20 11 chr5 11200418 11202969 -188427181 + L1PA15 LINE L1 1532 4059 -2757 2227 158 44 0 chr5 11202969 11203355 -188426795 + MER57A LTR ERV1 1 403 0 16208 201 20 11 chr5 11203355 11206043 -188424107 + L1PA15 LINE L1 4059 6813 -3 32 95 0 0 chr5 11206258 11206353 -188423797 + AT_rich Low_complexity Low_complexity 1 95 0 468 327 36 6 chr5 11207186 11207354 -188422796 + MIR SINE MIR 33 205 -57 825 237 93 13 chr5 11207523 11207823 -188422327 + L1MC3 LINE L1 4143 4466 -1749 212 59 29 0 chr5 11207836 11207870 -188422280 + (TA)n Simple_repeat Simple_repeat 1 35 0 740 218 16 0 chr5 11207882 11208070 -188422080 + L1MC3 LINE L1 4534 4724 -1491 * 2502 194 14 42 chr5 11208068 11208138 -188422012 - L1 LINE L1 -1807 4339 4269 2417 108 0 0 chr5 11208138 11208445 -188421705 - AluSc SINE Alu -2 307 1 2502 194 14 42 chr5 11208445 11208997 -188421153 - L1 LINE L1 -1877 4269 3734 8770 197 37 67 chr5 11209001 11209526 -188420624 + L1MC3 LINE L1 4713 5252 -2812 4340 95 5 5 chr5 11209526 11210155 -188419995 + L1PA13 LINE L1 5532 6160 -3 8770 197 37 67 chr5 11210155 11210634 -188419516 + L1MC3 LINE L1 5252 5744 -2320 561 220 0 9 chr5 11210634 11210743 -188419407 + AluJo SINE Alu 120 227 -85 6391 94 10 4 chr5 11210744 11211687 -188418463 + L1PA10 LINE L1 5221 6168 0 8770 197 37 67 chr5 11211687 11213502 -188416648 + L1MC3 LINE L1 5744 7750 -314 1934 123 3 34 chr5 11213502 11213795 -188416355 + AluSx SINE Alu 1 284 -28 8770 197 37 67 chr5 11213795 11214100 -188416050 + L1MC3 LINE L1 7750 8063 -1 198 0 0 0 chr5 11214263 11214285 -188415865 + (A)n Simple_repeat Simple_repeat 1 22 0 434 255 176 7 chr5 11214491 11214644 -188415506 + MER5A DNA MER1_type 4 182 -7 183 319 159 35 chr5 11214694 11214807 -188415343 + L2 LINE L2 3109 3235 -37 27 29 0 0 chr5 11215913 11215947 -188414203 + AT_rich Low_complexity Low_complexity 1 34 0 513 253 77 22 chr5 11216306 11216488 -188413662 - MER117 DNA MER1_type -3 194 3 3537 144 30 16 chr5 11216764 11217253 -188412897 + L1MA5 LINE L1 5625 6127 -173 847 200 42 0 chr5 11217253 11217418 -188412732 - FAM SINE Alu -3 172 1 3537 144 30 16 chr5 11217418 11217595 -188412555 + L1MA5 LINE L1 6127 6300 0 27 108 0 0 chr5 11218131 11218242 -188411908 + AT_rich Low_complexity Low_complexity 1 111 0 2106 147 3 0 chr5 11218592 11218899 -188411251 - AluSq SINE Alu -5 308 1 308 250 18 27 chr5 11219287 11219399 -188410751 + GA-rich Low_complexity Low_complexity 2 112 0 416 293 159 21 chr5 11219410 11219700 -188410450 + L1ME4a LINE L1 5742 6071 -50 2196 81 7 24 chr5 11219709 11220004 -188410146 - AluSp SINE Alu -23 290 1 2085 194 52 47 chr5 11220161 11220780 -188409370 + LTR29 LTR ERV1 1 622 0 196 154 39 0 chr5 11221903 11221955 -188408195 + (TCTA)n Simple_repeat Simple_repeat 3 56 0 1647 233 113 53 chr5 11221997 11222041 -188408109 - Charlie2a DNA MER1_type -177 2685 2645 705 240 88 0 chr5 11222041 11222212 -188407938 + MER5A DNA MER1_type 1 186 -3 1647 233 113 53 chr5 11222212 11222996 -188407154 - Charlie2a DNA MER1_type -217 2645 1807 401 229 95 56 chr5 11223196 11223375 -188406775 - Charlie2a DNA MER1_type -1181 1681 1496 276 269 47 41 chr5 11223536 11223707 -188406443 - Charlie2a DNA MER1_type -2278 584 413 1229 221 174 43 chr5 11223754 11224192 -188405958 + MLT1D LTR MaLR 1 495 -10 2035 121 3 50 chr5 11225961 11226283 -188403867 + AluSp SINE Alu 1 307 -6 213 310 113 21 chr5 11227716 11227858 -188402292 + MIR SINE MIR 17 171 -91 2188 115 0 7 chr5 11229020 11229316 -188400834 + AluSx SINE Alu 9 302 -10 234 227 45 11 chr5 11229327 11229415 -188400735 + L1MC/D LINE L1 2938 3028 -3118 2249 113 3 0 chr5 11229466 11229775 -188400375 + AluSp SINE Alu 1 310 -3 204 200 0 0 chr5 11229798 11229843 -188400307 + GA-rich Low_complexity Low_complexity 3 47 0 264 307 27 20 chr5 11230883 11231033 -188399117 + L1MC/D LINE L1 4497 4647 -1499 236 279 19 67 chr5 11232667 11232771 -188397379 - L3b LINE CR1 -92 1491 1393 2204 157 8 38 chr5 11233335 11233730 -188396420 - MLT1B LTR MaLR -7 383 1 387 41 0 0 chr5 11233939 11233988 -188396162 + (CA)n Simple_repeat Simple_repeat 2 50 0 955 169 47 42 chr5 11234993 11235206 -188394944 + MER20 DNA MER1_type 1 214 -5 464 240 72 8 chr5 11235259 11235384 -188394766 + MLT1H LTR MaLR 417 549 0 1013 294 59 25 chr5 11237307 11237745 -188392405 + L1MC/D LINE L1 5315 5767 -2041 1944 134 0 11 chr5 11238288 11238572 -188391578 + AluSq SINE Alu 1 281 -32 1662 105 0 0 chr5 11240177 11240423 -188389727 + AluSg/x SINE Alu 65 310 0 569 263 105 70 chr5 11241531 11241753 -188388397 - MLT1L LTR MaLR -112 503 267 1346 73 0 0 chr5 11241753 11241917 -188388233 + L1PA8 LINE L1 6009 6172 0 569 263 105 70 chr5 11241917 11241979 -188388171 - MLT1L LTR MaLR -348 267 209 2124 218 121 0 chr5 11242151 11242632 -188387518 + MLT1F LTR MaLR 4 542 0 287 294 220 0 chr5 11242716 11242893 -188387257 + Charlie8 DNA MER1_type 45 260 -2157 1300 129 13 67 chr5 11243252 11243583 -188386567 + L1MB1 LINE L1 5157 5474 -743 340 142 55 8 chr5 11243583 11243710 -188386440 + (TA)n Simple_repeat Simple_repeat 2 134 0 4040 136 22 14 chr5 11243710 11244378 -188385772 + L1MB1 LINE L1 5472 6145 -23 189 0 0 0 chr5 11244379 11244400 -188385750 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 1887 129 18 7 chr5 11244402 11244682 -188385468 - AluSx SINE Alu -29 283 1 234 91 0 0 chr5 11244733 11244766 -188385384 + (GGGA)n Simple_repeat Simple_repeat 4 36 0 284 217 0 0 chr5 11244853 11244913 -188385237 + Charlie8 DNA MER1_type 1356 1415 -1002 2321 165 22 2 chr5 11245018 11245418 -188384732 + MLT2C2 LTR ERVL 1 408 -56 228 125 0 0 chr5 11245585 11245617 -188384533 + MLT2C2 LTR ERVL 523 554 0 349 321 67 6 chr5 11247174 11247339 -188382811 + MIR SINE MIR 58 232 -30 229 293 40 10 chr5 11247541 11247640 -188382510 + (CATA)n Simple_repeat Simple_repeat 2 103 0 2156 146 18 15 chr5 11248828 11249170 -188380980 + MER61A LTR ERV1 1 343 0 23 0 0 0 chr5 11249244 11249267 -188380883 + AT_rich Low_complexity Low_complexity 1 23 0 241 278 28 0 chr5 11250073 11250145 -188380005 + L1 LINE L1 4498 4571 -1575 469 289 42 33 chr5 11250389 11250656 -188379494 + L1 LINE L1 4918 5190 -971 2097 111 3 38 chr5 11250656 11250971 -188379179 - AluSc SINE Alu -5 304 1 469 289 42 33 chr5 11250971 11251198 -188378952 + L1 LINE L1 5190 5413 -748 728 165 17 9 chr5 11251209 11251354 -188378796 + FLAM_C SINE Alu 2 147 0 1277 251 44 84 chr5 11251364 11252064 -188378086 + L1MC4 LINE L1 7332 8003 -39 402 359 59 30 chr5 11252133 11252349 -188377801 + L2 LINE L2 1799 2034 -1280 2430 36 40 10 chr5 11252349 11252651 -188377499 + AluY SINE Alu 1 311 0 402 359 59 30 chr5 11252651 11252838 -188377312 + L2 LINE L2 2034 2214 -1100 621 296 45 38 chr5 11252885 11253325 -188376825 - MLT1H LTR MaLR 0 549 29 946 218 143 47 chr5 11254706 11255091 -188375059 + MLT1F1 LTR MaLR 144 565 -2 192 77 0 0 chr5 11257039 11257065 -188373085 + (T)n Simple_repeat Simple_repeat 1 26 0 6464 118 62 79 chr5 11257828 11259133 -188371017 + pTR5 LTR ERV1 743 2025 -413 327 229 31 0 chr5 11259133 11259229 -188370921 + LTR30 LTR ERV1 544 642 -80 920 122 0 7 chr5 11259232 11259371 -188370779 + pTR5 LTR ERV1 172 309 -2129 426 255 176 7 chr5 11260195 11260348 -188369802 - MER5A DNA MER1_type -7 182 4 9325 187 19 56 chr5 11260737 11261042 -188369108 - L1MC3 LINE L1 0 7785 7470 1932 123 3 34 chr5 11261042 11261335 -188368815 - AluSx SINE Alu -28 284 1 9325 187 19 56 chr5 11261335 11263149 -188367001 - L1MC3 LINE L1 -315 7470 5744 19935 34 2 0 chr5 11263151 11266214 -188363936 - L1PA10 LINE L1 0 6168 3100 586 267 85 6 chr5 11266879 11267055 -188363095 + MIR SINE MIR 18 207 -55 2011 135 3 3 chr5 11267665 11267962 -188362188 + AluSq SINE Alu 2 298 -15 1814 157 17 0 chr5 11269199 11269360 -188360790 - AluJb SINE Alu -17 295 125 2203 102 3 3 chr5 11269360 11269654 -188360496 - AluSc SINE Alu -15 294 1 1814 157 17 0 chr5 11269654 11269779 -188360371 - AluJb SINE Alu -187 125 4 22 0 0 0 chr5 11269785 11269807 -188360343 + AT_rich Low_complexity Low_complexity 1 22 0 1702 243 165 45 chr5 11270003 11270645 -188359505 + L1ME3A LINE L1 4742 5305 -865 5344 78 0 0 chr5 11270645 11271308 -188358842 + L1PA8 LINE L1 5503 6165 -7 1702 243 165 45 chr5 11271308 11271935 -188358215 + L1ME3A LINE L1 5305 6165 -5 275 227 53 0 chr5 11272810 11272885 -188357265 - 7SK RNA RNA -100 93 15 392 89 69 0 chr5 11272890 11272991 -188357159 + (TA)n Simple_repeat Simple_repeat 1 108 0 739 145 0 90 chr5 11273010 11273155 -188356995 + AluJ SINE Alu 2 133 -169 791 180 12 66 chr5 11273159 11273326 -188356824 + AluJ SINE Alu 130 287 -25 2924 139 21 25 chr5 11273335 11273818 -188356332 - MER31A LTR ERV1 -4 481 1 238 246 15 0 chr5 11275108 11275173 -188354977 - L1MB4 LINE L1 0 6180 6115 253 286 0 0 chr5 11275954 11276031 -188354119 + L2 LINE L2 3235 3311 -2 330 293 14 21 chr5 11276209 11276349 -188353801 + CT-rich Low_complexity Low_complexity 3 141 0 1258 144 0 33 chr5 11276795 11277010 -188353140 - L1MA9 LINE L1 -5 6307 6100 299 180 66 0 chr5 11277800 11277861 -188352289 - L1MA9 LINE L1 -5 6307 6243 1156 199 5 23 chr5 11279425 11279646 -188350504 + MER58A DNA MER1_type 6 222 -2 2233 203 65 15 chr5 11279916 11280394 -188349756 - MLT1D LTR MaLR -3 502 1 444 19 0 0 chr5 11280922 11280975 -188349175 + (A)n Simple_repeat Simple_repeat 1 53 0 1956 158 78 45 chr5 11280986 11281141 -188349009 + MLT1B LTR MaLR 1 150 -240 2243 115 3 0 chr5 11281141 11281446 -188348704 + AluSx SINE Alu 5 310 -2 1956 158 78 45 chr5 11281446 11281664 -188348486 + MLT1B LTR MaLR 150 386 -4 375 188 83 21 chr5 11281709 11281805 -188348345 - LTR16A1 LTR ERVL -351 106 5 305 266 164 83 chr5 11283585 11283745 -188346405 - L2 LINE L2 -197 3116 2970 2525 193 74 55 chr5 11283745 11284288 -188345862 + MLT2B3 LTR ERVL 2 554 0 305 266 164 83 chr5 11284288 11284518 -188345632 - L2 LINE L2 -343 2970 2694 212 289 134 35 chr5 11284839 11284981 -188345169 + MIR3 SINE MIR 30 185 -23 2282 112 0 0 chr5 11285178 11285473 -188344677 + AluSx SINE Alu 1 295 -17 428 279 38 25 chr5 11285730 11285888 -188344262 + LTR67 LTR ERVL 29 188 -369 557 280 116 57 chr5 11286278 11286856 -188343294 - L1MC4a LINE L1 -1904 5904 5293 23 33 0 0 chr5 11287039 11287069 -188343081 + AT_rich Low_complexity Low_complexity 1 30 0 571 294 82 77 chr5 11287239 11288033 -188342117 + L1M4 LINE L1 4027 4824 -1322 600 263 53 13 chr5 11288473 11288625 -188341525 - MER5A DNA MER1_type 0 189 32 396 40 0 0 chr5 11288689 11288739 -188341411 + (CA)n Simple_repeat Simple_repeat 1 50 0 6668 205 25 100 chr5 11288950 11290999 -188339151 + L1M4 LINE L1 5 1934 -4712 1916 139 17 46 chr5 11291035 11291380 -188338770 + THE1B LTR MaLR 30 364 0 1836 154 4 4 chr5 11291380 11291660 -188338490 + AluJb SINE Alu 14 293 -19 586 274 95 21 chr5 11291665 11292192 -188337958 + L1M4 LINE L1 1926 2577 -4069 1510 180 92 30 chr5 11293012 11293412 -188336738 + MER69 DNA AcHobo 2089 2513 -13 1540 53 5 0 chr5 11293643 11293833 -188336317 - AluY SINE Alu -5 306 116 910 286 84 23 chr5 11293974 11294470 -188335680 - L2 LINE L2 -60 3253 2723 347 285 76 83 chr5 11294834 11295449 -188334701 - L1ME4a LINE L1 -43 6078 5468 1541 107 42 106 chr5 11345464 11345747 -188284403 + pTR5 LTR ERV1 172 581 -133 425 35 35 0 chr5 11348569 11348626 -188281524 - L1PA4 LINE L1 -2 6153 6095 1943 140 97 32 chr5 11349693 11350035 -188280115 + THE1B LTR MaLR 1 364 0 414 345 24 73 chr5 11350508 11350890 -188279260 + L2 LINE L2 2883 3245 -27 581 352 101 17 chr5 11350918 11351485 -188278665 - L2 LINE L2 -47 3266 2639 227 298 18 26 chr5 11351522 11351636 -188278514 - L2 LINE L2 -831 2483 2371 2419 159 5 10 chr5 11351734 11352131 -188278019 - MLT2C1 LTR ERVL -2 395 1 1381 201 0 0 chr5 11352183 11352407 -188277743 + MER58A DNA MER1_type 1 224 0 1923 186 8 37 chr5 11352946 11353322 -188276828 + MLT1A1 LTR MaLR 1 365 0 210 324 55 41 chr5 11353582 11353727 -188276423 - MIR SINE MIR 0 262 116 26 0 0 0 chr5 11353824 11353850 -188276300 + AT_rich Low_complexity Low_complexity 1 26 0 2086 141 143 8 chr5 11353897 11354267 -188275883 - MSTA LTR MaLR 0 428 9 911 293 113 3 chr5 11355378 11355706 -188274444 + LTR16C LTR ERVL 128 491 0 567 284 20 26 chr5 11356288 11356507 -188273643 + MIR SINE MIR 41 257 -5 22 0 0 0 chr5 11357990 11358012 -188272138 + AT_rich Low_complexity Low_complexity 1 22 0 406 135 289 19 chr5 11358808 11358912 -188271238 + MER104 DNA Tc2 46 177 -3 278 245 21 21 chr5 11359148 11359242 -188270908 + MER103 DNA DNA 72 165 -1 214 286 131 24 chr5 11359284 11359368 -188270782 - MIR SINE MIR -133 129 37 22 0 0 0 chr5 11360107 11360129 -188270021 + AT_rich Low_complexity Low_complexity 1 22 0 357 283 28 9 chr5 11360231 11360337 -188269813 - MIR3 SINE MIR -30 178 71 2008 98 38 21 chr5 11360891 11361178 -188268972 - AluSp SINE Alu -21 292 1 1181 62 0 0 chr5 11362314 11362458 -188267692 - L1PA4 LINE L1 -3 6152 6009 22 70 0 0 chr5 11362930 11362973 -188267177 + AT_rich Low_complexity Low_complexity 1 43 0 407 200 12 24 chr5 11363649 11363734 -188266416 + MLT1D LTR MaLR 1 84 -421 606 339 178 23 chr5 11363982 11364443 -188265707 - L2 LINE L2 -571 2743 2355 7545 64 2 3 chr5 11364443 11365942 -188264208 + L1PA8 LINE L1 4674 6172 0 606 339 178 23 chr5 11365942 11366273 -188263877 - L2 LINE L2 -959 2355 1828 2413 164 24 12 chr5 11366292 11366706 -188263444 - MSTB1 LTR MaLR -13 419 1 354 359 116 22 chr5 11366713 11367117 -188263033 - L2 LINE L2 -1493 1821 1380 613 108 0 0 chr5 11367222 11367305 -188262845 - AluSg/x SINE Alu -9 301 219 2497 160 33 16 chr5 11367396 11367821 -188262329 - MSTB1 LTR MaLR 0 432 1 241 273 45 45 chr5 11368732 11368864 -188261286 - MLT1J2 LTR MaLR -31 419 288 1033 289 72 35 chr5 11368939 11369395 -188260755 + LTR33 LTR ERVL 3 475 -46 318 291 46 20 chr5 11369414 11369565 -188260585 - MLT1J1 LTR MaLR -287 159 5 207 309 0 0 chr5 11370299 11370354 -188259796 + MIR3 SINE MIR 152 206 -2 7901 32 3 0 chr5 11371549 11372978 -188257172 - L1PA4 LINE L1 -4 6151 4716 8450 27 15 0 chr5 11372978 11373963 -188256187 + L1PA4 LINE L1 3718 4717 -1429 3866 121 73 38 chr5 11374169 11374298 -188255852 - MER41B LTR ERV1 0 635 512 2256 104 7 3 chr5 11374298 11374605 -188255545 + AluSx SINE Alu 1 308 -4 3866 121 73 38 chr5 11374605 11375088 -188255062 - MER41B LTR ERV1 -123 512 1 446 223 126 94 chr5 11375158 11375540 -188254610 - MER31-int LTR ERV1 -1619 3317 2924 202 246 0 18 chr5 11377646 11377703 -188252447 + A-rich Low_complexity Low_complexity 2 57 0 419 202 20 0 chr5 11377843 11377942 -188252208 - LTR37A LTR ERV1 -3 423 323 25 75 0 0 chr5 11378136 11378189 -188251961 + AT_rich Low_complexity Low_complexity 1 53 0 233 321 124 7 chr5 11378234 11378371 -188251779 + MIR3 SINE MIR 32 184 -24 396 263 56 44 chr5 11378400 11378560 -188251590 + MER5A DNA MER1_type 27 188 -1 3284 261 27 15 chr5 11378886 11379890 -188250260 + L1ME4a LINE L1 3176 4191 -1955 632 79 11 0 chr5 11379900 11379989 -188250161 + 5S rRNA rRNA 1 90 -31 540 226 16 8 chr5 11379989 11380113 -188250037 + L1ME4a LINE L1 4195 4319 -1827 2339 96 0 7 chr5 11382216 11382518 -188247632 + AluSc SINE Alu 1 300 -9 465 282 102 63 chr5 11383697 11384140 -188246010 + L1ME4a LINE L1 5566 6025 -96 26 64 0 0 chr5 11384185 11384232 -188245918 + AT_rich Low_complexity Low_complexity 1 47 0 453 251 77 158 chr5 11385852 11386368 -188243782 + L2 LINE L2 2021 2577 -736 454 256 139 0 chr5 11386368 11386505 -188243645 + MIR SINE MIR 22 177 -85 453 251 77 158 chr5 11386505 11386645 -188243505 + L2 LINE L2 2577 2727 -586 2092 113 20 0 chr5 11386645 11386938 -188243212 + AluSx SINE Alu 5 303 -9 453 251 77 158 chr5 11386938 11387270 -188242880 + L2 LINE L2 2727 3053 -260 336 234 9 65 chr5 11387294 11387401 -188242749 + L2 LINE L2 472 572 -2742 310 296 109 23 chr5 11387469 11387726 -188242424 + L2 LINE L2 869 1147 -2167 8042 145 19 7 chr5 11387777 11390198 -188239952 - L1MA3 LINE L1 -6 7718 5264 23625 149 18 16 chr5 11390233 11395558 -188234592 - L1MA3 LINE L1 -2214 5351 1 534 257 219 25 chr5 11395558 11395795 -188234355 + L2 LINE L2 1218 1500 -1814 15275 134 24 15 chr5 11395797 11396873 -188233277 - Tigger1 DNA MER2_type 0 2418 1353 2817 16 0 0 chr5 11396873 11397177 -188232973 - AluYb8 SINE Alu -13 305 2 15275 134 24 15 chr5 11397177 11397996 -188232154 - Tigger1 DNA MER2_type -1065 1353 494 2592 179 17 2 chr5 11397996 11398416 -188231734 + MSTB LTR MaLR 1 426 0 15275 134 24 15 chr5 11398416 11398915 -188231235 - Tigger1 DNA MER2_type -1924 494 1 180 211 0 26 chr5 11398921 11398959 -188231191 + MER5A DNA MER1_type 147 183 -6 949 299 123 43 chr5 11398971 11399624 -188230526 + L2 LINE L2 1505 2209 -1105 228 219 0 0 chr5 11399631 11399672 -188230478 - MLT2C1 LTR ERVL 0 397 357 216 0 0 0 chr5 11399672 11399696 -188230454 + (TG)n Simple_repeat Simple_repeat 1 24 0 1711 173 50 29 chr5 11399731 11400073 -188230077 + MLT2C1 LTR ERVL 30 485 -35 323 26 0 0 chr5 11400069 11400108 -188230042 - MLT2C1 LTR ERVL -356 41 3 * 1173 291 167 16 chr5 11400112 11401069 -188229081 + L2 LINE L2 2215 3313 0 21 0 0 0 chr5 11402588 11402609 -188227541 + AT_rich Low_complexity Low_complexity 1 21 0 808 260 28 44 chr5 11402906 11403156 -188226994 + MIR SINE MIR 15 260 -2 1481 221 88 16 chr5 11403619 11404004 -188226146 - MLT1C LTR MaLR -54 413 1 273 265 140 22 chr5 11404868 11405004 -188225146 + MARNA DNA Mariner 281 432 -154 505 268 60 36 chr5 11405527 11405695 -188224455 - MER5B DNA MER1_type -4 174 3 262 310 112 35 chr5 11406068 11406184 -188223966 + L2 LINE L2 3143 3267 -5 330 238 33 57 chr5 11407064 11407186 -188222964 - MIR3 SINE MIR -7 201 83 22 0 0 0 chr5 11407595 11407617 -188222533 + AT_rich Low_complexity Low_complexity 1 22 0 880 259 32 16 chr5 11408508 11408759 -188221391 - HsTC2c DNA Tc2 -5 724 470 688 285 121 16 chr5 11408796 11409101 -188221049 - MLT1I LTR MaLR -19 390 54 1312 285 21 5 chr5 11409180 11409563 -188220587 - HsTC2c DNA Tc2 -312 417 29 204 97 0 0 chr5 11409595 11409626 -188220524 + (TG)n Simple_repeat Simple_repeat 2 32 0 1951 130 7 36 chr5 11409636 11409943 -188220207 - AluSx SINE Alu -14 298 1 231 36 0 0 chr5 11410193 11410221 -188219929 + (CA)n Simple_repeat Simple_repeat 2 29 0 412 222 111 92 chr5 11410364 11410420 -188219730 - MER5B DNA MER1_type -10 168 115 1976 177 0 0 chr5 11410420 11410731 -188219419 + AluSx SINE Alu 1 311 -1 412 222 111 92 chr5 11410731 11410827 -188219323 - MER5B DNA MER1_type -63 115 13 200 288 0 14 chr5 11411212 11411285 -188218865 + (CATATA)n Simple_repeat Simple_repeat 1 72 0 31 0 0 0 chr5 11413382 11413413 -188216737 + AT_rich Low_complexity Low_complexity 1 31 0 1337 138 23 23 chr5 11413954 11414171 -188215979 - L1MA5A LINE L1 -21 6276 6060 183 263 0 0 chr5 11414395 11414433 -188215717 + L2 LINE L2 3210 3247 -25 420 213 12 0 chr5 11415490 11415570 -188214580 - MER81 DNA DNA -32 82 2 306 73 0 0 chr5 11415724 11415765 -188214385 + (A)n Simple_repeat Simple_repeat 1 41 0 730 188 78 42 chr5 11416159 11416351 -188213799 + MER20 DNA MER1_type 1 199 -20 1638 216 66 46 chr5 11416918 11417417 -188212733 + L1MB7 LINE L1 5666 6174 -10 265 375 15 29 chr5 11417470 11417606 -188212544 + MIR SINE MIR 17 150 -58 767 184 123 0 chr5 11419118 11419281 -188210869 + MER20 DNA MER1_type 37 219 0 227 328 86 8 chr5 11419448 11419576 -188210574 - L2 LINE L2 -170 3102 2965 1559 223 36 31 chr5 11419749 11419913 -188210237 + MLT1A2 LTR MaLR 1 163 -211 1874 132 4 0 chr5 11419913 11420185 -188209965 + AluSx SINE Alu 1 273 -39 1559 223 36 31 chr5 11420185 11420379 -188209771 + MLT1A2 LTR MaLR 163 361 -13 1226 138 10 0 chr5 11420399 11420595 -188209555 + L1PB1 LINE L1 3 200 -6663 15044 155 47 13 chr5 11420595 11421624 -188208526 + L1PB1 LINE L1 634 1627 -5240 2304 96 0 3 chr5 11421624 11421926 -188208224 + AluY SINE Alu 1 301 -10 15044 155 47 13 chr5 11421926 11426874 -188203276 + L1PB1 LINE L1 1627 6865 -2 27 0 0 0 chr5 11426894 11426921 -188203229 + AT_rich Low_complexity Low_complexity 1 27 0 2977 233 84 56 chr5 11426974 11428305 -188201845 + MLT1A2-int LTR MaLR 5 1726 -9 1745 191 77 9 chr5 11428314 11428664 -188201486 + MLT1A2 LTR MaLR 1 374 0 403 164 27 0 chr5 11428809 11428882 -188201268 + L1MD2 LINE L1 6282 6356 -3 421 275 140 0 chr5 11429150 11429328 -188200822 + L2 LINE L2 1821 2023 -1291 2108 208 6 0 chr5 11430006 11430367 -188199783 + MLT1A1 LTR MaLR 1 363 -2 571 321 146 0 chr5 11430528 11430815 -188199335 + L2 LINE L2 2026 2354 -960 547 304 164 44 chr5 11430826 11431276 -188198874 + L2 LINE L2 2808 3311 -2 207 104 62 0 chr5 11431292 11431340 -188198810 + (TA)n Simple_repeat Simple_repeat 1 51 0 245 292 142 33 chr5 11431702 11431822 -188198328 - L2 LINE L2 -39 3233 3101 776 244 135 70 chr5 11431851 11431971 -188198179 + MLT1J LTR MaLR 71 182 -329 1815 189 141 12 chr5 11431971 11432383 -188197767 + MLT1C LTR MaLR 1 465 -2 776 244 135 70 chr5 11432383 11432676 -188197474 + MLT1J LTR MaLR 182 511 0 228 127 55 0 chr5 11434418 11434473 -188195677 + (TAGA)n Simple_repeat Simple_repeat 1 58 0 310 262 103 8 chr5 11435880 11436006 -188194144 + L1ME4a LINE L1 5978 6115 -6 680 187 65 0 chr5 11436496 11436635 -188193515 + L1MB7 LINE L1 6017 6164 -20 1764 173 37 58 chr5 11436696 11437078 -188193072 - THE1C LTR MaLR -1 374 1 1002 256 209 2 chr5 11437411 11437833 -188192317 - MLT1H LTR MaLR -2 547 39 325 359 14 14 chr5 11438443 11438588 -188191562 - MER5B DNA MER1_type 0 178 34 683 290 98 45 chr5 11438865 11439262 -188190888 - MLT1J LTR MaLR -9 502 85 349 292 6 35 chr5 11439365 11439536 -188190614 + L1ME4a LINE L1 5678 5843 -278 217 299 13 13 chr5 11440839 11440916 -188189234 + MIR SINE MIR 65 141 -121 236 327 14 108 chr5 11441067 11441290 -188188860 + L2 LINE L2 2865 3066 -247 2316 96 0 0 chr5 11441348 11441649 -188188501 - AluY SINE Alu -10 301 1 284 289 149 35 chr5 11441676 11441877 -188188273 - L1MC4a LINE L1 -1893 5915 5692 180 0 0 0 chr5 11442020 11442040 -188188110 + (A)n Simple_repeat Simple_repeat 1 20 0 569 235 37 37 chr5 11442252 11442414 -188187736 - MER106B DNA MER1_type -1 1058 897 624 136 0 68 chr5 11442462 11442653 -188187497 + (GGGAA)n Simple_repeat Simple_repeat 2 179 0 219 127 36 18 chr5 11442653 11442708 -188187442 + GA-rich Low_complexity Low_complexity 2 57 0 186 133 0 0 chr5 11442734 11442764 -188187386 + (GAAA)n Simple_repeat Simple_repeat 1 30 0 261 324 135 40 chr5 11442831 11443202 -188186948 - LTR33 LTR ERVL 0 521 116 2209 94 14 3 chr5 11443572 11443858 -188186292 + AluSq SINE Alu 9 297 -16 1048 240 71 106 chr5 11444120 11444176 -188185974 - L1MC4 LINE L1 -782 7179 7123 2679 99 34 6 chr5 11444176 11444530 -188185620 - THE1B LTR MaLR 0 364 1 1048 240 71 106 chr5 11444530 11445041 -188185109 - L1MC4 LINE L1 -838 7123 6637 28 102 0 0 chr5 11445052 11445150 -188185000 + AT_rich Low_complexity Low_complexity 1 98 0 447 330 122 36 chr5 11445749 11446453 -188183697 + L2 LINE L2 1933 2712 -602 1334 208 3 61 chr5 11446453 11446598 -188183552 + AluJb SINE Alu 1 120 -192 240 59 0 0 chr5 11446598 11446632 -188183518 + (CA)n Simple_repeat Simple_repeat 1 34 0 1334 208 3 61 chr5 11446632 11446799 -188183351 + AluJb SINE Alu 120 295 -17 447 330 122 36 chr5 11446799 11446874 -188183276 + L2 LINE L2 2712 2779 -535 191 276 16 114 chr5 11447020 11447110 -188183040 + L2 LINE L2 2935 3011 -261 2310 125 0 0 chr5 11447110 11447423 -188182727 - AluSq SINE Alu 0 313 1 191 276 16 114 chr5 11447423 11447455 -188182695 + L2 LINE L2 3011 3045 -227 312 91 0 0 chr5 11449148 11449175 -188180975 + (TGGA)n Simple_repeat Simple_repeat 1 71 0 312 91 0 0 chr5 11449175 11449219 -188180931 + (TGGA)n Simple_repeat Simple_repeat 1 44 0 288 184 64 21 chr5 11449220 11449593 -188180557 + (TAGA)n Simple_repeat Simple_repeat 1 388 0 267 31 0 0 chr5 11449603 11449635 -188180515 + (CA)n Simple_repeat Simple_repeat 1 32 0 304 308 68 14 chr5 11450130 11450351 -188179799 + L1ME LINE L1 5497 5729 -392 324 294 42 25 chr5 11450706 11450825 -188179325 - L3b LINE CR1 -334 1249 1129 191 287 154 37 chr5 11450913 11451049 -188179101 - MIR3 SINE MIR -38 170 19 4497 101 5 15 chr5 11451783 11452389 -188177761 - MER4A LTR ERV1 0 600 1 21 0 0 0 chr5 11452715 11452736 -188177414 + AT_rich Low_complexity Low_complexity 1 21 0 315 217 101 0 chr5 11452738 11452807 -188177343 - MER116 DNA Mariner -4 76 1 353 305 153 25 chr5 11453197 11453400 -188176750 + MIR SINE MIR 24 252 -10 220 289 132 8 chr5 11454685 11454806 -188175344 + MIR3 SINE MIR 4 139 -69 2315 113 89 15 chr5 11454952 11455289 -188174861 + THE1B LTR MaLR 1 362 -2 1178 155 23 41 chr5 11455356 11455575 -188174575 - MER20 DNA MER1_type -4 215 1 560 293 153 58 chr5 11455740 11456010 -188174140 + ERVL LTR ERVL 900 1143 -4621 192 77 0 0 chr5 11456010 11456036 -188174114 + (GCTG)n Simple_repeat Simple_repeat 1 26 0 560 293 153 58 chr5 11456036 11456503 -188173647 + ERVL LTR ERVL 1143 1707 -4057 289 187 220 0 chr5 11456687 11456778 -188173372 - L2 LINE L2 -1 3312 3202 329 319 11 0 chr5 11456810 11456904 -188173246 + L2 LINE L2 3216 3310 -3 432 230 67 67 chr5 11457087 11457252 -188172898 - MER5A DNA MER1_type 0 189 25 345 299 45 6 chr5 11459645 11459802 -188170348 - L1MCc LINE L1 -4593 2529 2367 785 126 8 8 chr5 11459811 11459972 -188170178 - AluY SINE Alu 0 311 180 383 300 136 36 chr5 11459977 11460601 -188169549 - L1MCc LINE L1 -4761 2361 1429 1732 260 33 18 chr5 11460601 11461058 -188169092 + LTR40c LTR ERVL 1 464 -1 383 300 136 36 chr5 11461058 11461223 -188168927 - L1MCc LINE L1 -5693 1429 1282 2205 118 3 10 chr5 11461286 11461599 -188168551 - AluSx SINE Alu 0 312 2 377 247 0 0 chr5 11462504 11462589 -188167561 - MLT1E LTR MaLR -1 653 569 1519 247 112 34 chr5 11462728 11463193 -188166957 - MLT1E LTR MaLR -90 503 3 338 342 128 53 chr5 11463213 11463661 -188166489 + L2 LINE L2 2725 3207 -65 1137 140 8 103 chr5 11464003 11464246 -188165904 + MLT1A2 LTR MaLR 1 220 -154 1150 256 92 19 chr5 11466427 11466841 -188163309 - LTR16A1 LTR ERVL 0 457 14 1173 158 5 26 chr5 11466855 11467045 -188163105 + MER5A DNA MER1_type 1 186 -3 318 294 76 34 chr5 11467255 11467374 -188162776 - MIR3 SINE MIR -2 206 83 1399 165 15 4 chr5 11467446 11467706 -188162444 + L1MA7 LINE L1 6020 6282 -9 27 0 0 0 chr5 11467735 11467762 -188162388 + AT_rich Low_complexity Low_complexity 1 27 0 501 309 124 0 chr5 11468339 11468533 -188161617 - MIR SINE MIR -36 226 9 24 0 0 0 chr5 11471821 11471845 -188158305 + AT_rich Low_complexity Low_complexity 1 24 0 2060 168 25 98 chr5 11472118 11472606 -188157544 - MER66A LTR ERV1 0 478 27 2695 166 17 23 chr5 11472952 11473422 -188156728 - MLT1C LTR MaLR 0 467 1 340 196 0 150 chr5 11473847 11473975 -188156175 - MER105 DNA DNA -42 162 59 4883 165 10 33 chr5 11473975 11474787 -188155363 + MER54B LTR ERVL 1 793 0 340 196 0 150 chr5 11474787 11474811 -188155339 - MER105 DNA DNA -145 59 33 259 293 55 22 chr5 11475599 11475780 -188154370 + L1MEd LINE L1 595 781 -5338 3353 155 11 33 chr5 11475784 11476418 -188153732 + L1MA4 LINE L1 5666 6285 -15 1017 125 46 0 chr5 11476419 11476571 -188153579 + L1PA11 LINE L1 6016 6174 0 2108 226 97 30 chr5 11476583 11477308 -188152842 - L1M3e LINE L1 -4972 2058 1286 848 181 21 0 chr5 11477309 11477453 -188152697 - L1M3e LINE L1 -6726 304 158 486 233 23 8 chr5 11477451 11477580 -188152570 + L1ME3A LINE L1 5832 5962 -208 * 259 226 60 75 chr5 11477689 11477822 -188152328 + L1ME3A LINE L1 6031 6161 -9 751 300 123 3 chr5 11479577 11479894 -188150256 - LTR16B LTR ERVL -90 374 20 225 0 0 0 chr5 11480016 11480041 -188150109 + (T)n Simple_repeat Simple_repeat 1 25 0 362 258 156 21 chr5 11480062 11480248 -188149902 + MER102b DNA MER1_type 55 265 -76 289 336 0 8 chr5 11480347 11480469 -188149681 + L2 LINE L2 3188 3308 -5 1679 168 0 38 chr5 11481586 11481901 -188148249 - AluJo SINE Alu -9 303 1 2168 87 20 13 chr5 11482251 11482551 -188147599 - AluY SINE Alu -9 302 1 2008 128 3 20 chr5 11483332 11483636 -188146514 + AluSx SINE Alu 1 299 -13 382 296 32 26 chr5 11484081 11484270 -188145880 - L2 LINE L2 -614 2700 2511 572 289 80 56 chr5 11484435 11485398 -188144752 - L1MDa LINE L1 -4512 1703 835 2473 215 18 28 chr5 11486078 11486261 -188143889 + MER68 LTR ERV1 54 237 -325 2463 131 8 3 chr5 11486261 11486621 -188143529 - THE1B LTR MaLR 0 364 3 10406 105 38 35 chr5 11486623 11488199 -188141951 - THE1B-int LTR MaLR 0 1580 1 2448 109 31 14 chr5 11488199 11488557 -188141593 - THE1B LTR MaLR 0 364 1 2473 215 18 28 chr5 11488557 11488872 -188141278 + MER68 LTR ERV1 236 551 -11 292 327 186 10 chr5 11488993 11489299 -188140851 + L2 LINE L2 1950 2309 -1005 280 286 65 0 chr5 11489502 11489579 -188140571 - L2 LINE L2 -5 3308 3227 414 284 15 55 chr5 11491925 11492126 -188138024 - MIR SINE MIR 0 262 70 365 268 5 15 chr5 11492537 11492573 -188137577 + GA-rich Low_complexity Low_complexity 1 36 -455 2077 127 3 10 chr5 11492573 11492873 -188137277 + AluSx SINE Alu 2 299 -13 365 268 5 15 chr5 11492873 11493033 -188137117 + GA-rich Low_complexity Low_complexity 36 491 0 23 0 0 0 chr5 11493591 11493614 -188136536 + AT_rich Low_complexity Low_complexity 1 23 0 268 195 8 154 chr5 11494156 11494279 -188135871 - MER102b DNA MER1_type -4 337 233 29 0 0 0 chr5 11495585 11495614 -188134536 + AT_rich Low_complexity Low_complexity 1 29 0 554 335 23 23 chr5 11497793 11498050 -188132100 + MLT2F LTR ERVL 17 273 -390 1041 196 47 17 chr5 11498054 11498289 -188131861 - MER96B DNA MER1_type? 0 417 176 841 266 64 53 chr5 11498305 11498666 -188131484 + MLT2F LTR ERVL 280 644 -19 908 201 54 10 chr5 11499471 11499675 -188130475 - MER20 DNA MER1_type 0 219 7 1244 204 4 4 chr5 11499876 11500106 -188130044 + L1P3 LINE L1 700 929 -4946 6936 114 17 39 chr5 11500127 11501332 -188128818 + L1PA10 LINE L1 4277 5441 -727 2026 132 7 3 chr5 11501332 11501619 -188128531 + AluSx SINE Alu 1 288 -24 6936 114 17 39 chr5 11501619 11501849 -188128301 + L1PA10 LINE L1 5441 5674 -494 3613 105 20 0 chr5 11501871 11502377 -188127773 + L1PA10 LINE L1 5652 6167 -1 486 260 133 17 chr5 11502599 11502780 -188127370 - MLT1H LTR MaLR -2 547 346 1455 203 14 89 chr5 11502829 11503180 -188126970 - MSTD LTR MaLR 0 396 81 2341 97 3 0 chr5 11503180 11503480 -188126670 + AluY SINE Alu 1 301 -10 1455 203 14 89 chr5 11503480 11503556 -188126594 - MSTD LTR MaLR -315 81 1 777 265 142 0 chr5 11503967 11504186 -188125964 - MIR SINE MIR -7 255 6 26 0 0 0 chr5 11504220 11504246 -188125904 + AT_rich Low_complexity Low_complexity 1 26 0 23 33 0 0 chr5 11504799 11504829 -188125321 + AT_rich Low_complexity Low_complexity 1 30 0 2194 117 3 3 chr5 11505016 11505316 -188124834 - AluSx SINE Alu -11 301 2 2103 122 13 7 chr5 11505317 11505620 -188124530 - AluSx SINE Alu -7 305 1 1107 103 7 0 chr5 11505718 11505873 -188124277 + L1PA15 LINE L1 6002 6157 -8 460 230 121 40 chr5 11505962 11506136 -188124014 - L1ME LINE L1 -470 5700 5513 290 239 229 0 chr5 11506639 11506748 -188123402 - L2 LINE L2 -17 3255 3122 459 301 99 6 chr5 11508130 11508435 -188121715 + L1ME LINE L1 125 465 -5605 236 336 93 25 chr5 11508791 11509199 -188120951 - L2 LINE L2 -835 2479 2044 405 305 64 0 chr5 11509954 11510095 -188120055 + Charlie1 DNA MER1_type 1 150 -2611 * 1426 184 127 31 chr5 11510088 11510473 -188119677 + Charlie1 DNA MER1_type 2282 2703 -58 367 291 28 50 chr5 11511426 11511605 -188118545 + MER5B DNA MER1_type 1 175 -3 718 91 83 0 chr5 11562458 11562579 -188067571 + L1MA5 LINE L1 6160 6290 -10 3417 46 10 0 chr5 11562725 11563140 -188067010 + L1PA5 LINE L1 5734 6152 -2 1831 154 59 0 chr5 11563150 11563436 -188066714 + AluJb SINE Alu 1 303 -9 2358 100 0 6 chr5 11563610 11563921 -188066229 - AluSg SINE Alu -1 309 1 598 258 45 25 chr5 11563997 11564361 -188065789 - L1ME LINE L1 -743 5403 5107 1163 219 120 69 chr5 11564383 11564849 -188065301 + MLT1D LTR MaLR 12 501 -4 243 254 99 28 chr5 11564882 11565024 -188065126 - L1ME LINE L1 -1092 5054 4903 2196 98 6 19 chr5 11565087 11565403 -188064747 + AluSp SINE Alu 1 312 -1 3325 121 2 34 chr5 11565428 11565955 -188064195 + L1PB1 LINE L1 5634 6143 -8 395 322 26 26 chr5 11566457 11566687 -188063463 - L1ME LINE L1 -1461 4685 4456 5242 158 14 5 chr5 11566706 11567602 -188062548 - L1MC1 LINE L1 0 6333 5429 536 260 75 78 chr5 11567739 11568124 -188062026 - MLT1J LTR MaLR -92 419 36 2504 66 0 28 chr5 11568130 11568450 -188061700 + AluY SINE Alu 1 311 0 1453 320 57 26 chr5 11568522 11570185 -188059965 - L1ME LINE L1 -1706 4440 2676 1532 234 122 22 chr5 11570274 11570726 -188059424 - MLT1D LTR MaLR -8 497 1 235 302 52 17 chr5 11570788 11570960 -188059190 - L1ME LINE L1 -3664 2482 2305 2635 48 0 10 chr5 11571566 11571879 -188058271 + AluY SINE Alu 1 310 -1 716 149 0 16 chr5 11573223 11573344 -188056806 + FLAM_C SINE Alu 2 120 -23 584 27 14 0 chr5 11573344 11573418 -188056732 + (TAGA)n Simple_repeat Simple_repeat 4 78 0 1455 196 82 12 chr5 11573530 11573871 -188056279 + MLT1A1 LTR MaLR 1 365 0 204 273 140 7 chr5 11574210 11574353 -188055797 - L2 LINE L2 -10 3262 3101 393 205 158 0 chr5 11574781 11574908 -188055242 - MER5C DNA MER1_type -4 320 174 2336 159 12 59 chr5 11574908 11575778 -188054372 + L1MA4A LINE L1 5186 5929 -226 759 177 64 14 chr5 11575778 11575919 -188054231 + THE1C LTR MaLR 1 148 -227 2453 47 14 10 chr5 11576047 11576343 -188053807 + AluY SINE Alu 1 297 -14 2902 138 39 55 chr5 11576789 11576944 -188053206 - L1MA9 LINE L1 -1 6311 6155 180 97 0 0 chr5 11576944 11576975 -188053175 + (TG)n Simple_repeat Simple_repeat 1 31 0 2902 138 39 55 chr5 11576975 11577355 -188052795 - L1MA9 LINE L1 -157 6155 5784 2125 123 0 0 chr5 11577355 11577648 -188052502 - AluSx SINE Alu -19 293 1 2902 138 39 55 chr5 11577648 11577707 -188052443 - L1MA9 LINE L1 -528 5784 5726 647 258 45 10 chr5 11579144 11579342 -188050808 - MIR SINE MIR -57 205 1 404 289 36 36 chr5 11579829 11579995 -188050155 + MIR SINE MIR 65 230 -32 1949 187 52 9 chr5 11580358 11580706 -188049444 - MLT1A1 LTR MaLR -2 363 1 309 239 188 0 chr5 11582299 11582416 -188047734 - MLT1J2 LTR MaLR -245 205 67 240 35 0 0 chr5 11583446 11583475 -188046675 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 221 332 81 58 chr5 11585356 11585823 -188044327 + L2 LINE L2 2820 3297 -16 673 240 91 13 chr5 11585908 11586062 -188044088 - MER20 DNA MER1_type -1 218 53 31 0 0 0 chr5 11586808 11586839 -188043311 + AT_rich Low_complexity Low_complexity 1 31 0 307 300 46 31 chr5 11587075 11587205 -188042945 + MIR SINE MIR 17 148 -60 2017 119 9 35 chr5 11587209 11587528 -188042622 + AluJo SINE Alu 1 311 -1 2320 16 0 0 chr5 11587891 11588146 -188042004 - L1P1 LINE L1 -432 5723 5469 871 50 0 0 chr5 11588146 11588245 -188041905 + L1PA3 LINE L1 6052 6152 -3 247 252 86 28 chr5 11588546 11588683 -188041467 - LTR33A LTR ERVL -3 520 403 546 286 49 35 chr5 11589515 11589718 -188040432 + MIR SINE MIR 16 221 -41 2462 147 24 31 chr5 11589727 11590142 -188040008 - MLT2D LTR ERVL 0 414 3 321 293 40 0 chr5 11591977 11592076 -188038074 + MIR SINE MIR 43 145 -63 681 233 223 40 chr5 11592076 11592449 -188037701 + MLT1H LTR MaLR 2 442 -107 263 258 0 21 chr5 11592594 11592687 -188037463 + L1MC4 LINE L1 6614 6704 -1338 224 189 38 38 chr5 11594141 11594194 -188035956 - MER5A DNA MER1_type 0 189 137 240 214 87 48 chr5 11594212 11594315 -188035835 - L1MC4 LINE L1 -1340 6702 6596 327 258 52 0 chr5 11595063 11595160 -188034990 - L2 LINE L2 -7 3265 3164 327 349 95 11 chr5 11595316 11595580 -188034570 - L1MC4 LINE L1 -2228 5580 5295 609 296 139 18 chr5 11595706 11595980 -188034170 + MLT1I LTR MaLR 75 381 -28 372 250 62 8 chr5 11596564 11596622 -188033528 + HAL1 LINE L1 2289 2342 -165 3402 188 18 38 chr5 11596622 11597011 -188033139 - MLT1E1 LTR MaLR 0 654 282 2255 117 0 0 chr5 11597011 11597309 -188032841 - AluSx SINE Alu -9 303 6 3402 188 18 38 chr5 11597309 11597584 -188032566 - MLT1E1 LTR MaLR -372 282 3 372 250 62 8 chr5 11597584 11597653 -188032497 + HAL1 LINE L1 2342 2423 -84 1696 201 13 87 chr5 11598160 11598632 -188031518 + MLT1D LTR MaLR 61 497 -8 423 256 64 60 chr5 11598672 11598906 -188031244 + HAL1b LINE L1 336 570 -778 659 329 57 57 chr5 11598994 11599416 -188030734 - L2 LINE L2 0 3313 2892 901 256 107 8 chr5 11599428 11599690 -188030460 - MLT1G1 LTR MaLR -307 288 1 826 254 89 44 chr5 11599876 11600214 -188029936 - MLT1H LTR MaLR -7 542 190 746 295 82 63 chr5 11600525 11600745 -188029405 + L1M4 LINE L1 2740 2954 -3192 900 224 50 36 chr5 11600745 11600964 -188029186 - MER58A DNA MER1_type -1 223 2 746 295 82 63 chr5 11600964 11601452 -188028698 + L1M4 LINE L1 2954 3461 -2685 4438 114 48 0 chr5 11601494 11602141 -188028009 + L1PA7 LINE L1 10 687 -5774 20464 89 22 2 chr5 11602142 11605648 -188024502 + L1PA7 LINE L1 2917 6464 -5 436 278 81 45 chr5 11605682 11605905 -188024245 - MIR SINE MIR -3 259 29 328 298 102 15 chr5 11606129 11606334 -188023816 + L1M4 LINE L1 3688 3910 -2236 180 0 0 0 chr5 11606847 11606867 -188023283 + (TA)n Simple_repeat Simple_repeat 2 21 0 328 290 51 54 chr5 11607848 11608124 -188022026 + HAL1b LINE L1 38 312 -1036 2380 92 0 0 chr5 11608148 11608452 -188021698 - AluY SINE Alu -7 304 1 553 269 102 19 chr5 11608573 11608896 -188021254 + HAL1b LINE L1 521 870 -478 1541 173 8 4 chr5 11609112 11609367 -188020783 - AluJb SINE Alu -22 290 35 270 0 0 0 chr5 11609369 11609399 -188020751 + (TTTA)n Simple_repeat Simple_repeat 1 30 0 547 92 0 0 chr5 11609399 11609464 -188020686 - AluSg/x SINE Alu -30 280 216 502 271 73 53 chr5 11610845 11611092 -188019058 + L2 LINE L2 3057 3308 -5 247 299 28 35 chr5 11611254 11611367 -188018783 + L1ME4a LINE L1 5792 5905 -216 1556 216 32 118 chr5 11611367 11611936 -188018214 + MLT2B1 LTR ERVL 1 520 0 247 299 28 35 chr5 11611936 11611966 -188018184 + L1ME4a LINE L1 5905 5934 -187 4903 123 35 11 chr5 11612562 11613304 -188016846 + MER4E LTR ERV1 20 779 0 346 224 0 0 chr5 11613315 11613382 -188016768 + MLT1H LTR MaLR 481 547 -2 316 324 76 0 chr5 11613407 11613552 -188016598 + L1ME4a LINE L1 5964 6119 -2 1349 196 99 54 chr5 11617405 11617610 -188012540 - MLT1B LTR MaLR 0 390 196 2199 117 3 10 chr5 11617610 11617917 -188012233 - AluSc SINE Alu -4 305 1 1349 196 99 54 chr5 11617917 11618084 -188012066 - MLT1B LTR MaLR -194 196 1 404 194 0 11 chr5 11619134 11619227 -188010923 - MER53 DNA DNA -1 188 97 354 233 35 35 chr5 11619669 11619755 -188010395 - MIR SINE MIR -72 136 51 33 0 0 0 chr5 11619826 11619859 -188010291 + AT_rich Low_complexity Low_complexity 1 33 0 225 239 16 43 chr5 11619862 11620046 -188010104 + (TAA)n Simple_repeat Simple_repeat 1 179 0 28 0 0 0 chr5 11620046 11620074 -188010076 + AT_rich Low_complexity Low_complexity 1 28 0 210 318 16 0 chr5 11620120 11620183 -188009967 - L2 LINE L2 -2 3311 3248 621 251 29 12 chr5 11620210 11620381 -188009769 + MLT1J2 LTR MaLR 8 181 -269 2241 185 42 81 chr5 11620381 11620922 -188009228 - MLT2B1 LTR ERVL 0 520 1 406 204 65 19 chr5 11621364 11621472 -188008678 - MIR SINE MIR -32 230 118 2806 113 14 0 chr5 11621487 11621857 -188008293 - THE1C LTR MaLR 0 375 1 15762 90 12 6 chr5 11621907 11624791 -188005359 - L1PA7 LINE L1 -1 6153 3253 4523 166 159 31 chr5 11624807 11625836 -188004314 + L1P LINE L1 589 1749 -4397 1349 181 0 14 chr5 11625875 11626096 -188004054 + MER20 DNA MER1_type 1 218 -1 2660 172 14 2 chr5 11626129 11626548 -188003602 - MSTB LTR MaLR -2 424 1 1516 301 191 43 chr5 11626571 11628096 -188002054 - L2 LINE L2 -427 2887 1137 1785 119 42 18 chr5 11628392 11628678 -188001472 - L1MC1 LINE L1 -8 6325 6033 892 250 83 70 chr5 11628758 11629214 -188000936 - MLT1C LTR MaLR 0 467 6 757 203 23 74 chr5 11629300 11629539 -188000611 + L1MA4 LINE L1 5952 6300 0 28 29 0 0 chr5 11629809 11629844 -188000306 + AT_rich Low_complexity Low_complexity 1 35 0 2120 104 22 0 chr5 11629844 11630122 -188000028 - AluSx SINE Alu -28 284 1 749 226 5 0 chr5 11630202 11630392 -187999758 - L1MA4 LINE L1 0 6300 6110 549 82 12 0 chr5 11630532 11630617 -187999533 - L1P LINE L1 -742 5426 5341 5694 91 0 0 chr5 11630617 11631319 -187998831 + L1PA10 LINE L1 5448 6152 -16 21 36 0 0 chr5 11633343 11633371 -187996779 + AT_rich Low_complexity Low_complexity 1 28 0 584 240 76 29 chr5 11633874 11634273 -187995877 + MLT1D LTR MaLR 4 615 -11 1985 204 78 21 chr5 11636104 11636516 -187993634 - MER89 LTR ERV1 -4 555 168 2381 117 0 61 chr5 11636516 11636875 -187993275 - MER1B DNA MER1_type 0 337 1 1985 204 78 21 chr5 11636875 11636906 -187993244 - MER89 LTR ERV1 -391 168 140 2307 110 59 31 chr5 11636906 11637260 -187992890 + THE1B LTR MaLR 1 364 0 1985 204 78 21 chr5 11637260 11637339 -187992811 - MER89 LTR ERV1 -419 140 2 1406 216 76 38 chr5 11637428 11637873 -187992277 + MLT1C LTR MaLR 6 467 0 28 48 0 0 chr5 11638590 11638632 -187991518 + AT_rich Low_complexity Low_complexity 1 42 0 446 245 73 81 chr5 11639126 11639307 -187990843 + L1ME4a LINE L1 5564 5745 -376 3973 107 58 2 chr5 11639307 11639876 -187990274 + LTR43 LTR ERV1 1 601 -1 446 245 73 81 chr5 11639876 11640003 -187990147 + L1ME4a LINE L1 5745 5871 -250 2588 180 19 41 chr5 11640003 11640519 -187989631 - MLT1D LTR MaLR 0 505 1 446 245 73 81 chr5 11640519 11640593 -187989557 + L1ME4a LINE L1 5871 5944 -177 413 197 26 0 chr5 11640602 11640678 -187989472 - MER21B LTR ERV1 -769 94 17 507 313 129 41 chr5 11640969 11641686 -187988464 - L2 LINE L2 0 3313 2544 238 240 27 53 chr5 11643323 11643398 -187986752 - L3 LINE CR1 -903 674 602 734 200 23 9 chr5 11643738 11643993 -187986157 + MLT2D LTR ERVL 1 220 -194 259 137 0 39 chr5 11643996 11644047 -187986103 + MLT2D LTR ERVL 416 464 0 1373 142 9 108 chr5 11645519 11645835 -187984315 + MLT1B LTR MaLR 1 285 -105 1785 233 97 61 chr5 11645836 11646536 -187983614 - MER50 LTR ERV1 0 734 10 650 188 8 0 chr5 11646533 11646650 -187983500 + MLT1B LTR MaLR 350 467 0 * 7445 54 9 0 chr5 11647111 11648395 -187981755 - L1PA7 LINE L1 -2 6152 4854 4257 151 15 34 chr5 11648685 11649370 -187980780 + LTR8A LTR ERV1 1 672 -55 1920 162 58 36 chr5 11649370 11649735 -187980415 - THE1C LTR MaLR -2 373 1 4257 151 15 34 chr5 11649735 11649790 -187980360 + LTR8A LTR ERV1 672 727 0 2068 182 63 40 chr5 11653155 11653599 -187976551 - MLT1C LTR MaLR -5 462 9 783 236 28 6 chr5 11653862 11654040 -187976110 - MER5A DNA MER1_type -4 185 4 1062 211 124 60 chr5 11654153 11654588 -187975562 + MLT1C LTR MaLR 5 467 0 12323 165 34 43 chr5 11654592 11658051 -187972099 + L1PB1 LINE L1 2367 5792 -510 288 182 73 0 chr5 11658302 11658357 -187971793 + MLT1K LTR MaLR 530 588 0 333 0 0 0 chr5 11658498 11658535 -187971615 + (TG)n Simple_repeat Simple_repeat 2 38 0 2302 153 135 7 chr5 11659287 11659738 -187970412 - MLT2B1 LTR ERVL -11 509 1 2524 107 14 3 chr5 11659842 11660188 -187969962 + L1PB1 LINE L1 5799 6148 -3 1964 131 67 64 chr5 11661620 11661994 -187968156 - THE1C LTR MaLR 0 375 1 24 0 0 0 chr5 11662083 11662107 -187968043 + AT_rich Low_complexity Low_complexity 1 24 0 362 284 69 17 chr5 11662556 11662672 -187967478 - MIR3 SINE MIR -38 170 49 261 0 0 0 chr5 11663393 11663422 -187966728 + (TG)n Simple_repeat Simple_repeat 2 30 0 1003 238 38 61 chr5 11664924 11665319 -187964831 + L1MA9 LINE L1 5902 6287 -25 728 319 138 30 chr5 11665734 11666542 -187963608 + L2 LINE L2 2186 3311 -2 1029 172 60 60 chr5 11667016 11667249 -187962901 - MER106A DNA MER1_type -1 235 3 2997 156 4 2 chr5 11668781 11669269 -187960881 + L1MB2 LINE L1 5333 5821 -350 1998 98 56 0 chr5 11669272 11669538 -187960612 + AluSq SINE Alu 1 281 -32 339 136 0 0 chr5 11669538 11669597 -187960553 + (GGA)n Simple_repeat Simple_repeat 3 61 0 681 137 5 13 chr5 11669597 11669717 -187960433 + L1MB2 LINE L1 5814 5933 -238 486 71 0 14 chr5 11669717 11669785 -187960365 + L1MB2 LINE L1 6096 6164 -7 681 137 5 13 chr5 11669785 11669809 -187960341 + L1MB2 LINE L1 5933 6164 -7 219 261 31 0 chr5 11669958 11670023 -187960127 + (CAGAGA)n Simple_repeat Simple_repeat 2 68 0 1089 231 33 0 chr5 11670428 11670640 -187959510 + MER20 DNA MER1_type 1 219 0 2025 171 49 38 chr5 11673522 11673971 -187956179 + Charlie4a DNA MER1_type 44 497 -11 1102 156 91 0 chr5 11674278 11674477 -187955673 - L1PA16 LINE L1 -3 6163 5947 202 346 28 28 chr5 11674584 11674691 -187955459 - MIR3 SINE MIR -32 176 70 1677 159 6 28 chr5 11674767 11675093 -187955057 - L1MA6 LINE L1 0 6300 5982 682 271 44 6 chr5 11675098 11675320 -187954830 - MIR SINE MIR -7 255 30 317 241 98 45 chr5 11675466 11675599 -187954551 + MIR SINE MIR 121 260 -2 1882 191 46 114 chr5 11676291 11677096 -187953054 - LTR8A LTR ERV1 0 727 1 35938 68 7 4 chr5 11677843 11683968 -187946182 + L1PA5 LINE L1 5 6154 0 641 167 0 0 chr5 11684596 11684710 -187945440 + L1MA8 LINE L1 6156 6269 -22 21 0 0 0 chr5 11685184 11685205 -187944945 + AT_rich Low_complexity Low_complexity 1 21 0 324 262 0 12 chr5 11685589 11685673 -187944477 - Charlie7 DNA MER1_type 0 2612 2530 1174 283 68 14 chr5 11685680 11686107 -187944043 + LTR16A LTR ERVL 1 450 0 862 228 34 15 chr5 11686257 11686463 -187943687 - MLT1A1 LTR MaLR 0 365 156 1155 140 4 72 chr5 11687190 11687426 -187942724 + L1PA13 LINE L1 1532 1751 -5036 1307 129 143 34 chr5 11687426 11687613 -187942537 - MSTA LTR MaLR 0 428 263 186 43 0 0 chr5 11687613 11687636 -187942514 + (GA)n Simple_repeat Simple_repeat 1 23 0 1307 129 143 34 chr5 11687636 11687772 -187942378 - MSTA LTR MaLR -165 263 1 5661 220 33 7 chr5 11687773 11689474 -187940676 + L1PA13 LINE L1 1748 3494 -3303 43047 56 4 0 chr5 11689486 11695618 -187934532 + L1PA5 LINE L1 1 6153 -1 9812 197 36 13 chr5 11695598 11697738 -187932412 + L1PA13 LINE L1 3451 5639 -1158 * 37589 93 13 10 chr5 11697836 11703952 -187926198 - L1PA6 LINE L1 -13 6141 11 1445 203 7 0 chr5 11703940 11704245 -187925905 + L1P LINE L1 4931 5237 -909 * 1578 174 18 18 chr5 11705720 11706025 -187924125 + AluJo SINE Alu 1 305 0 542 287 24 12 chr5 11706862 11707026 -187923124 + MIR SINE MIR 35 200 -62 671 220 69 0 chr5 11707029 11707188 -187922962 + MER45A DNA AcHobo 1 170 -8 6529 193 38 32 chr5 11707620 11710509 -187919641 + L1M3f LINE L1 4 2919 -3409 954 190 0 0 chr5 11710509 11710667 -187919483 + L1PB4 LINE L1 5996 6153 -3 6529 193 38 32 chr5 11710667 11711387 -187918763 + L1M3f LINE L1 2919 3633 -2695 20907 165 50 14 chr5 11711387 11718459 -187911691 - L1MA1 LINE L1 -178 7543 13 542 315 40 46 chr5 11718500 11719012 -187911138 - MER115 DNA AcHobo -28 665 54 358 305 17 0 chr5 11719804 11719922 -187910228 - MIR3 SINE MIR -7 201 82 191 308 103 26 chr5 11720154 11720271 -187909879 + MIR3 SINE MIR 13 138 -70 425 344 116 43 chr5 11720887 11721189 -187908961 + L2 LINE L2 2949 3272 0 285 251 161 39 chr5 11722692 11722922 -187907228 + MLT1I LTR MaLR 195 409 0 308 315 175 22 chr5 11723711 11724076 -187906074 + L2 LINE L2 1991 2411 -903 1377 190 61 98 chr5 11724089 11724363 -187905787 + MLT1C LTR MaLR 8 258 -209 1666 157 7 23 chr5 11724363 11724669 -187905481 + L1MA4 LINE L1 5999 6299 -1 1377 190 61 98 chr5 11724669 11724872 -187905278 + MLT1C LTR MaLR 258 467 0 229 318 77 27 chr5 11724881 11725142 -187905008 + L2 LINE L2 2437 2710 -604 322 271 79 50 chr5 11725674 11725814 -187904336 + L2 LINE L2 3103 3246 -26 3137 160 19 6 chr5 11726882 11727407 -187902743 - L1MB3 LINE L1 -1 6182 5651 188 227 15 30 chr5 11727803 11727869 -187902281 + MIR SINE MIR 185 249 -13 1435 194 100 71 chr5 11727992 11728608 -187901542 - MLT1D LTR MaLR 0 505 1 1021 165 28 6 chr5 11729558 11729734 -187900416 + MER2 DNA MER2_type 1 180 -165 * 1189 152 3 21 chr5 11729711 11730092 -187900058 + LTR32 LTR ERVL 6 471 0 400 56 19 0 chr5 11730092 11730140 -187900010 + MER2 DNA MER2_type 162 210 -135 1430 113 156 19 chr5 11730141 11730398 -187899752 - LTR18B LTR ERVL 0 614 323 870 184 24 68 chr5 11730394 11730601 -187899549 - LTR18B LTR ERVL -416 198 1 * 356 277 0 0 chr5 11730636 11730701 -187899449 + MER2 DNA MER2_type 280 344 -1 232 184 75 98 chr5 11732735 11732909 -187897241 - Charlie7 DNA MER1_type -16 2596 2427 1925 148 20 7 chr5 11733084 11733382 -187896768 + AluJb SINE Alu 2 303 -9 267 294 52 37 chr5 11733472 11733608 -187896542 - L2 LINE L2 -188 3084 2947 266 222 116 37 chr5 11733610 11733740 -187896410 - MER5A DNA MER1_type -2 176 49 794 203 88 39 chr5 11733940 11734239 -187895911 - MLT1A2 LTR MaLR -4 370 1 258 302 112 39 chr5 11734602 11734834 -187895316 + MLT1K LTR MaLR 340 588 0 2526 52 0 0 chr5 11734917 11735222 -187894928 - AluY SINE Alu -6 305 1 226 272 39 39 chr5 11735730 11735833 -187894317 + L3 LINE CR1 1474 1576 -1 283 229 72 24 chr5 11735940 11736023 -187894127 - MLT1K LTR MaLR 0 588 502 520 236 27 0 chr5 11736271 11736381 -187893769 + MER81 DNA DNA 2 114 0 1733 164 6 25 chr5 11737647 11738045 -187892105 + AluJo SINE Alu 1 392 0 4873 144 2 188 chr5 11738465 11739142 -187891008 - MSTA-int LTR MaLR -497 1083 556 1205 126 0 22 chr5 11739142 11739324 -187890826 - AluSx SINE Alu -95 217 40 4873 144 2 188 chr5 11739324 11739792 -187890358 - MSTA-int LTR MaLR -1024 556 3 2823 129 26 5 chr5 11739794 11740213 -187889937 - MSTA LTR MaLR 0 428 1 209 138 17 52 chr5 11740245 11740303 -187889847 + (TA)n Simple_repeat Simple_repeat 2 57 0 22 35 0 0 chr5 11740436 11740465 -187889685 + AT_rich Low_complexity Low_complexity 1 29 0 310 241 161 0 chr5 11740474 11740561 -187889589 + L1MEd LINE L1 4 104 -6015 1681 147 110 40 chr5 11740566 11740912 -187889238 - THE1C LTR MaLR -5 370 1 448 234 66 144 chr5 11741172 11741445 -187888705 + L1MEd LINE L1 2132 2425 -3704 1877 149 0 0 chr5 11741445 11741761 -187888389 + AluSx SINE Alu 1 316 0 448 234 66 144 chr5 11741761 11742255 -187887895 + L1MEd LINE L1 2425 2840 -3289 561 274 19 42 chr5 11743555 11743725 -187886425 + L2 LINE L2 2317 2482 -832 2047 202 44 13 chr5 11743725 11744176 -187885974 + MLT1C LTR MaLR 1 465 -2 561 274 19 42 chr5 11744176 11744220 -187885930 + L2 LINE L2 2482 2526 -788 454 280 140 51 chr5 11744258 11744651 -187885499 + L2 LINE L2 2842 3269 -44 406 251 64 29 chr5 11745156 11745315 -187884835 + L1ME LINE L1 5313 5476 -682 231 237 0 17 chr5 11745350 11745409 -187884741 + L1ME LINE L1 5543 5600 -521 2330 60 0 3 chr5 11745679 11745977 -187884173 - AluY SINE Alu -14 297 1 246 58 0 58 chr5 11748308 11748360 -187881790 + (TA)n Simple_repeat Simple_repeat 1 49 0 1321 176 46 80 chr5 11748360 11748812 -187881338 + THE1C LTR MaLR 2 428 0 2206 95 0 0 chr5 11748876 11749172 -187880978 + AluSg SINE Alu 1 296 -14 2820 176 20 20 chr5 11749311 11749869 -187880281 + MER89 LTR ERV1 1 558 -1 906 135 0 0 chr5 11750189 11750322 -187879828 + AluJb SINE Alu 1 133 -179 2217 186 42 2 chr5 11751575 11751999 -187878151 + MLT1C LTR MaLR 1 441 -26 5611 107 102 78 chr5 11752086 11753636 -187876514 + pTR5 LTR ERV1 743 2438 0 186 167 0 0 chr5 11753996 11754026 -187876124 + MER5A DNA MER1_type 1 30 -159 196 111 0 0 chr5 11754039 11754066 -187876084 + MER5A DNA MER1_type 2 28 -161 303 274 151 0 chr5 11754147 11754253 -187875897 + MER5A DNA MER1_type 67 188 -1 1108 73 0 0 chr5 11754566 11754702 -187875448 - AluSq/x SINE Alu -176 136 1 332 324 43 29 chr5 11755063 11755270 -187874880 + L1M4 LINE L1 2278 2487 -3659 588 321 82 56 chr5 11755356 11755444 -187874706 + L1M4 LINE L1 2645 2729 -3417 2429 122 55 18 chr5 11755444 11755878 -187874272 + LTR7 LTR ERV1 1 450 0 588 321 82 56 chr5 11755878 11756341 -187873809 + L1M4 LINE L1 2729 3210 -2936 440 181 96 117 chr5 11756720 11756840 -187873310 - HAL1 LINE L1 -794 1713 1597 2217 95 0 7 chr5 11756840 11757145 -187873005 - AluSg SINE Alu -7 303 1 440 181 96 117 chr5 11757145 11757212 -187872938 - HAL1 LINE L1 -910 1597 1530 206 269 0 19 chr5 11757780 11757832 -187872318 - MIR3 SINE MIR -150 58 8 279 286 0 0 chr5 11758013 11758083 -187872067 - L2 LINE L2 0 3272 3203 2998 191 50 5 chr5 11759369 11759518 -187870632 + L1MB5 LINE L1 5526 5667 -507 273 119 0 0 chr5 11759518 11759560 -187870590 + (TA)n Simple_repeat Simple_repeat 2 43 0 2998 191 50 5 chr5 11759560 11760011 -187870139 + L1MB5 LINE L1 5667 6153 -21 1204 213 61 94 chr5 11761347 11761825 -187868325 - MLT1C LTR MaLR 0 467 6 1389 196 28 89 chr5 11763320 11763713 -187866437 + MLT1B LTR MaLR 20 388 -2 311 283 48 62 chr5 11763905 11764050 -187866100 + L1ME LINE L1 5572 5714 -407 2141 269 60 49 chr5 11764075 11764994 -187865156 - L1MC4 LINE L1 -1 8041 7113 289 375 15 0 chr5 11765087 11765223 -187864927 + ERVL LTR ERVL 2890 3027 -2627 1832 158 59 24 chr5 11765473 11765814 -187864336 - MLT1A1 LTR MaLR -12 353 1 337 290 97 24 chr5 11765949 11766156 -187863994 + ERVL LTR ERVL 5091 5312 -452 495 267 107 40 chr5 11766446 11766660 -187863490 + LTR33 LTR ERVL 1 215 -306 183 320 0 53 chr5 11766901 11766976 -187863174 - MIR SINE MIR -146 116 46 319 331 40 6 chr5 11767202 11767377 -187862773 + LTR16C LTR ERVL 279 459 -32 312 331 31 15 chr5 11767451 11767581 -187862569 + HAL1 LINE L1 1519 1650 -857 1705 142 0 58 chr5 11767596 11767905 -187862245 + AluSx SINE Alu 1 291 -21 518 225 69 74 chr5 11767911 11768233 -187861917 + MLT1E3 LTR MaLR 1 404 -220 1560 108 38 25 chr5 11768262 11768502 -187861648 + L1PB4 LINE L1 5912 6154 -2 349 130 29 14 chr5 11768527 11768596 -187861554 + MLT1E3 LTR MaLR 555 624 0 359 280 19 9 chr5 11768605 11768712 -187861438 + HAL1 LINE L1 1659 1766 -741 221 83 28 0 chr5 11769080 11769116 -187861034 + (GA)n Simple_repeat Simple_repeat 2 38 0 505 325 36 32 chr5 11769248 11769497 -187860653 + HAL1 LINE L1 2249 2498 -9 208 206 0 0 chr5 11769518 11769552 -187860598 + polypurine Low_complexity Low_complexity 3 36 0 249 331 8 31 chr5 11770176 11770306 -187859844 - MIR SINE MIR -50 212 86 1064 260 107 17 chr5 11770324 11770670 -187859480 - MLT1E2 LTR MaLR -249 377 1 222 37 0 0 chr5 11771440 11771467 -187858683 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 2063 94 4 0 chr5 11771473 11771749 -187858401 - AluSp SINE Alu -36 277 1 1567 258 132 25 chr5 11771757 11772281 -187857869 - MLT1G1 LTR MaLR -12 583 4 2375 154 49 2 chr5 11772410 11772819 -187857331 + MSTA LTR MaLR 1 428 0 224 242 121 0 chr5 11773921 11774012 -187856138 - MIR SINE MIR -79 183 82 2128 113 40 64 chr5 11774241 11774404 -187855746 + THE1B LTR MaLR 1 166 -198 2003 102 3 35 chr5 11774404 11774717 -187855433 - AluSq SINE Alu -10 303 1 2128 113 40 64 chr5 11774717 11774926 -187855224 + THE1B LTR MaLR 166 364 0 1645 207 264 13 chr5 11774947 11775648 -187854502 + Charlie7 DNA MER1_type 1505 2381 -231 2087 113 0 10 chr5 11775732 11776041 -187854109 + AluSx SINE Alu 1 306 -6 235 375 65 39 chr5 11776358 11776590 -187853560 + L2 LINE L2 3030 3267 -5 1963 182 39 51 chr5 11777633 11777804 -187852346 + MLT1C LTR MaLR 6 178 -289 2055 106 3 0 chr5 11777804 11778096 -187852054 + AluSx SINE Alu 1 293 -19 1963 182 39 51 chr5 11778096 11778392 -187851758 + MLT1C LTR MaLR 178 467 0 224 280 262 0 chr5 11778594 11778701 -187851449 - L2 LINE L2 -253 3060 2926 418 159 0 0 chr5 11778705 11778774 -187851376 + AluJ/FLAM SINE Alu 1 69 -243 409 231 77 101 chr5 11778776 11778984 -187851166 + AluJb SINE Alu 2 204 -98 700 175 9 0 chr5 11778986 11779100 -187851050 + FLAM_C SINE Alu 2 116 -17 1200 234 106 32 chr5 11779296 11779731 -187850419 - MLT1C LTR MaLR 0 467 1 2248 105 0 3 chr5 11831105 11831418 -187798732 + AluSx SINE Alu 1 312 0 246 156 266 0 chr5 11831966 11832030 -187798120 + L2 LINE L2 3231 3311 -2 213 253 22 88 chr5 11832531 11832622 -187797528 - MER5B DNA MER1_type -69 109 25 550 249 26 17 chr5 11832917 11833106 -187797044 + L1MC5 LINE L1 7061 7250 -728 443 188 75 30 chr5 11833245 11833378 -187796772 + L1MC5 LINE L1 7299 7437 -524 424 288 196 7 chr5 11833387 11833540 -187796610 + MER5A DNA MER1_type 8 189 0 282 223 168 29 chr5 11833558 11833832 -187796318 + L1MC5 LINE L1 7452 7763 -198 543 161 59 11 chr5 11834215 11834331 -187795819 + LTR8A LTR ERV1 1 105 -586 4580 109 14 33 chr5 11834331 11834867 -187795283 + LTR8 LTR ERV1 1 522 -169 2357 82 3 10 chr5 11834867 11835173 -187794977 + AluSp SINE Alu 1 304 -9 4580 109 14 33 chr5 11835173 11835340 -187794810 + LTR8 LTR ERV1 522 691 0 1541 104 36 0 chr5 11835530 11835750 -187794400 + AluSx SINE Alu 1 228 -84 37 0 0 0 chr5 11835750 11835787 -187794363 + AT_rich Low_complexity Low_complexity 1 37 0 500 243 99 7 chr5 11836050 11836148 -187794002 - MER5B DNA MER1_type -7 171 53 626 171 97 17 chr5 11836148 11836323 -187793827 - MER5A DNA MER1_type 0 189 1 500 243 99 7 chr5 11836323 11836376 -187793774 - MER5B DNA MER1_type -125 53 6 221 231 115 77 chr5 11837028 11837132 -187793018 + MIR3 SINE MIR 91 198 -10 298 305 90 6 chr5 11837920 11838087 -187792063 + LTR16C LTR ERVL 279 459 -32 312 331 31 15 chr5 11838161 11838291 -187791859 + HAL1 LINE L1 1519 1650 -857 1696 149 0 58 chr5 11838306 11838615 -187791535 + AluSx SINE Alu 1 291 -21 392 205 77 51 chr5 11838621 11838738 -187791412 + MLT1E2 LTR MaLR 1 120 -506 476 257 11 73 chr5 11838778 11838957 -187791193 + MLT1E2 LTR MaLR 233 400 -226 1542 113 38 25 chr5 11838986 11839226 -187790924 + L1PB4 LINE L1 5912 6154 -2 349 130 29 14 chr5 11839251 11839320 -187790830 + MLT1E2 LTR MaLR 555 624 0 359 280 19 9 chr5 11839329 11839436 -187790714 + HAL1 LINE L1 1659 1766 -741 181 81 27 27 chr5 11839804 11839841 -187790309 + (GA)n Simple_repeat Simple_repeat 2 38 0 500 329 36 32 chr5 11839973 11840222 -187789928 + HAL1 LINE L1 2249 2498 -9 208 206 0 0 chr5 11840243 11840277 -187789873 + polypurine Low_complexity Low_complexity 3 36 0 249 331 8 31 chr5 11840901 11841031 -187789119 - MIR SINE MIR -50 212 86 1085 257 107 17 chr5 11841049 11841395 -187788755 - MLT1E2 LTR MaLR -249 377 1 222 37 0 0 chr5 11842165 11842192 -187787958 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 2055 94 4 0 chr5 11842198 11842474 -187787676 - AluSp SINE Alu -36 277 1 1593 254 132 25 chr5 11842482 11843006 -187787144 - MLT1G1 LTR MaLR -12 583 4 2361 157 49 2 chr5 11843135 11843544 -187786606 + MSTA LTR MaLR 1 428 0 224 242 121 0 chr5 11844647 11844738 -187785412 - MIR SINE MIR -79 183 82 2128 113 40 64 chr5 11844967 11845130 -187785020 + THE1B LTR MaLR 1 166 -198 2003 102 3 35 chr5 11845130 11845443 -187784707 - AluSq SINE Alu -10 303 1 2128 113 40 64 chr5 11845443 11845652 -187784498 + THE1B LTR MaLR 166 364 0 1645 207 264 13 chr5 11845673 11846374 -187783776 + Charlie7 DNA MER1_type 1505 2381 -231 2087 113 0 10 chr5 11846458 11846767 -187783383 + AluSx SINE Alu 1 306 -6 235 375 65 39 chr5 11847084 11847316 -187782834 + L2 LINE L2 3030 3267 -5 1956 181 38 53 chr5 11848359 11848530 -187781620 + MLT1C LTR MaLR 6 178 -289 2101 100 3 0 chr5 11848530 11848821 -187781329 + AluSx SINE Alu 1 292 -20 1956 181 38 53 chr5 11848821 11849118 -187781032 + MLT1C LTR MaLR 178 467 0 224 280 262 0 chr5 11849320 11849427 -187780723 - L2 LINE L2 -253 3060 2926 418 159 0 0 chr5 11849431 11849500 -187780650 + AluJ/FLAM SINE Alu 1 69 -243 405 191 0 0 chr5 11849502 11849570 -187780580 + AluJ/FLAM SINE Alu 2 69 -233 700 175 9 0 chr5 11849572 11849686 -187780464 + FLAM_C SINE Alu 2 116 -17 1181 237 106 32 chr5 11849882 11850317 -187779833 - MLT1C LTR MaLR 0 467 1 1506 216 35 37 chr5 11851582 11851957 -187778193 + MLT1A2 LTR MaLR 1 374 0 705 91 83 0 chr5 11852407 11852528 -187777622 + L1MA5 LINE L1 6160 6290 -10 3377 51 10 0 chr5 11852674 11853089 -187777061 + L1PA5 LINE L1 5734 6152 -2 1739 155 58 0 chr5 11853099 11853390 -187776760 + AluJb SINE Alu 1 308 -4 277 319 89 27 chr5 11853475 11853732 -187776418 - L1MC4a LINE L1 -1878 5930 5658 2240 99 0 6 chr5 11853746 11854058 -187776092 - AluSg SINE Alu 0 310 1 576 258 45 25 chr5 11854134 11854498 -187775652 - L1MC4a LINE L1 -743 5403 5107 1186 219 120 69 chr5 11854520 11854986 -187775164 + MLT1D LTR MaLR 12 501 -4 232 254 99 28 chr5 11855019 11855161 -187774989 - L1MC4a LINE L1 -1092 5054 4903 284 224 0 0 chr5 11855165 11855223 -187774927 - LTR16B LTR ERVL 0 464 407 2046 101 6 19 chr5 11855224 11855540 -187774610 + AluSp SINE Alu 1 312 -1 2909 123 9 60 chr5 11855565 11856100 -187774050 + L1PB1 LINE L1 5634 6141 -10 381 339 17 17 chr5 11856697 11856927 -187773223 - L1MC4a LINE L1 -1461 4685 4456 5242 156 14 6 chr5 11856945 11857842 -187772308 - L1MC1 LINE L1 0 6333 5429 545 260 75 78 chr5 11857979 11858364 -187771786 - MLT1J LTR MaLR -92 419 36 2385 62 0 28 chr5 11858370 11858690 -187771460 + AluY SINE Alu 1 311 0 310 289 54 43 chr5 11858764 11859041 -187771109 - L1MC4a LINE L1 -1706 4440 4161 21 36 0 0 chr5 11859199 11859227 -187770923 + AT_rich Low_complexity Low_complexity 1 28 0 1306 321 52 25 chr5 11859239 11860517 -187769633 - L1MC4a LINE L1 -2158 3988 2676 1549 234 122 22 chr5 11860607 11861059 -187769091 - MLT1D LTR MaLR -8 497 1 466 325 63 5 chr5 11861087 11861293 -187768857 - L1MC4a LINE L1 -3624 2522 2305 2460 51 0 10 chr5 11861900 11862213 -187767937 + AluY SINE Alu 1 310 -1 753 141 0 16 chr5 11863556 11863677 -187766473 + FLAM_C SINE Alu 2 120 -23 548 29 14 0 chr5 11863677 11863747 -187766403 + (TAGA)n Simple_repeat Simple_repeat 4 74 0 1442 202 82 12 chr5 11863859 11864200 -187765950 + MLT1A1 LTR MaLR 1 365 0 228 269 163 14 chr5 11864539 11864680 -187765470 - L2 LINE L2 -10 3262 3101 456 214 153 0 chr5 11865104 11865235 -187764915 - MER5C DNA MER1_type 0 324 174 1955 189 15 94 chr5 11865235 11866105 -187764045 + L1PA2 LINE L1 5186 5929 -226 * 2764 125 34 26 chr5 11865753 11866105 -187764045 + L1MA4A LINE L1 5580 5938 -365 1904 163 35 35 chr5 11866105 11866480 -187763670 + THE1C LTR MaLR 1 375 0 2764 125 34 26 chr5 11866480 11866592 -187763558 + L1MA4A LINE L1 5938 6048 -255 2795 86 23 13 chr5 11866592 11866989 -187763161 + MLT2A1 LTR ERVL 1 401 -43 259 101 13 51 chr5 11866989 11867068 -187763082 + (TA)n Simple_repeat Simple_repeat 2 77 0 256 23 0 47 chr5 11867176 11867219 -187762931 + (TA)n Simple_repeat Simple_repeat 2 42 0 1326 113 28 0 chr5 11867266 11867479 -187762671 + L1MA4 LINE L1 6064 6282 -18 628 226 44 0 chr5 11867502 11867639 -187762511 - MER5C DNA MER1_type -165 159 17 237 138 0 138 chr5 11867710 11867768 -187762382 + MER58 DNA MER1_type 208 257 -84 1344 218 85 37 chr5 11867954 11868361 -187761789 - MLT1C LTR MaLR -3 464 30 1555 171 123 50 chr5 11868361 11868453 -187761697 + MSTC LTR MaLR 1 85 -343 685 46 0 0 chr5 11868453 11868540 -187761610 + L1PA4 LINE L1 6066 6152 -3 1555 171 123 50 chr5 11868540 11868845 -187761305 + MSTC LTR MaLR 85 427 -1 395 313 148 28 chr5 11868888 11869064 -187761086 - MIR SINE MIR -17 245 49 512 323 65 40 chr5 11869105 11869306 -187760844 - MIR SINE MIR -10 252 47 466 225 230 16 chr5 11869478 11869669 -187760481 - MLT1J2 LTR MaLR -144 306 75 214 125 75 0 chr5 11869773 11869813 -187760337 + L2 LINE L2 3228 3270 -2 218 339 0 0 chr5 11869909 11869968 -187760182 - MER91B DNA MER1_type -7 183 125 570 150 53 75 chr5 11870014 11870147 -187760003 - MER91B DNA MER1_type -60 130 1 606 172 25 0 chr5 11871024 11871146 -187759004 - L1MC1 LINE L1 -1 6332 6208 1525 160 42 17 chr5 11871172 11871459 -187758691 - AluJo SINE Alu -18 294 1 26 50 0 0 chr5 11871461 11871501 -187758649 + AT_rich Low_complexity Low_complexity 1 40 0 1256 102 0 5 chr5 11871728 11871914 -187758236 - L1PA13 LINE L1 0 6163 5979 1611 168 20 23 chr5 11874961 11875265 -187754885 + AluJb SINE Alu 1 303 -9 21 0 0 0 chr5 11875265 11875286 -187754864 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr5 11875521 11875551 -187754599 + AT_rich Low_complexity Low_complexity 1 30 0 1437 176 17 76 chr5 11876032 11876356 -187753794 - AluJo SINE Alu 0 307 2 318 338 53 7 chr5 11876714 11876865 -187753285 - MIR SINE MIR -11 251 94 2190 89 0 32 chr5 11877089 11877405 -187752745 + AluSc SINE Alu 4 309 0 432 249 160 22 chr5 11877485 11877666 -187752484 + MIR SINE MIR 57 262 0 25 31 0 0 chr5 11877771 11877803 -187752347 + AT_rich Low_complexity Low_complexity 1 32 0 442 146 29 19 chr5 11879400 11879503 -187750647 - MER20B DNA MER1_type 0 783 680 3714 157 21 25 chr5 11879508 11880188 -187749962 + L1MB2 LINE L1 5452 6128 -43 330 167 97 0 chr5 11880225 11880297 -187749853 - MSTD LTR MaLR -4 392 314 * 669 111 46 9 chr5 11880294 11880402 -187749748 - MSTD LTR MaLR -284 112 1 6924 228 47 38 chr5 11880402 11882121 -187748029 - MSTD-int LTR MaLR 0 1735 2 1910 196 48 5 chr5 11882125 11882503 -187747647 - MSTD LTR MaLR -2 394 1 459 254 135 36 chr5 11882507 11883061 -187747089 - MER20B DNA MER1_type -81 702 16 1720 71 4 0 chr5 11883256 11883482 -187746668 + L1PA8 LINE L1 5944 6170 -2 4278 122 9 8 chr5 11883980 11884614 -187745536 + MER41B LTR ERV1 1 635 0 250 220 20 0 chr5 11884775 11884825 -187745325 - L2 LINE L2 0 3272 3222 241 230 92 11 chr5 11886941 11887028 -187743122 + MLT1J1 LTR MaLR 345 438 -8 2395 93 0 0 chr5 11887045 11887345 -187742805 + AluSc SINE Alu 3 302 -7 1022 184 0 17 chr5 11887361 11887540 -187742610 + AluJo SINE Alu 5 180 -132 1524 205 10 7 chr5 11887712 11888005 -187742145 - AluJb SINE Alu -15 297 4 3775 65 0 7 chr5 11888015 11888479 -187741671 - L1PA13 LINE L1 0 6163 5703 317 302 42 0 chr5 11888481 11888577 -187741573 + MIR SINE MIR 88 187 -75 559 289 97 30 chr5 11888985 11889283 -187740867 + MLT1J1 LTR MaLR 125 442 -4 239 206 14 68 chr5 11889302 11889375 -187740775 + L2 LINE L2 3243 3311 -2 1557 180 170 41 chr5 11890688 11891100 -187739050 + MLT1C LTR MaLR 1 465 -2 2184 134 33 25 chr5 11891107 11891466 -187738684 - MLT1A1 LTR MaLR 0 365 4 385 178 68 0 chr5 11893794 11893867 -187736283 - MIR SINE MIR -106 156 79 30 45 0 0 chr5 11894596 11894640 -187735510 + AT_rich Low_complexity Low_complexity 1 44 0 981 184 6 0 chr5 11895325 11895488 -187734662 + MLT1A1 LTR MaLR 202 365 0 752 195 83 6 chr5 11896783 11896952 -187733198 - LTR40a LTR ERVL -314 205 24 252 276 233 0 chr5 11896972 11897088 -187733062 + HAL1 LINE L1 1504 1646 -861 1945 114 60 4 chr5 11897130 11897411 -187732739 + AluSx SINE Alu 1 297 -15 887 290 136 45 chr5 11898847 11899581 -187730569 + HAL1 LINE L1 4 804 -1703 2364 86 0 0 chr5 11899850 11900141 -187730009 + AluSg SINE Alu 2 292 -18 1218 122 87 0 chr5 11900261 11900457 -187729693 + L1MA1 LINE L1 6090 6302 0 326 254 66 8 chr5 11900625 11900747 -187729403 + HAL1 LINE L1 2030 2158 -349 619 200 38 79 chr5 11900852 11901092 -187729058 + HAL1 LINE L1 2191 2420 -87 31000 117 18 56 chr5 11901309 11907692 -187722458 + L1PA7 LINE L1 12 6148 -6 394 306 91 30 chr5 11907706 11907971 -187722179 + L1MDa LINE L1 2335 2615 -3925 2480 78 10 0 chr5 11908172 11908479 -187721671 - AluSq SINE Alu 0 313 4 1703 120 12 0 chr5 11908579 11908821 -187721329 - AluSq SINE Alu -59 254 10 5769 136 23 24 chr5 11908919 11909047 -187721103 + L1PA16 LINE L1 4873 5000 -1166 2052 127 3 0 chr5 11909047 11909356 -187720794 + AluSx SINE Alu 1 310 0 5769 136 23 24 chr5 11909356 11909372 -187720778 + L1PA16 LINE L1 5000 5015 -1151 1975 166 0 0 chr5 11909372 11909673 -187720477 + AluJb SINE Alu 1 301 -11 5769 136 23 24 chr5 11909673 11910818 -187719332 + L1PA16 LINE L1 5015 6157 -9 707 185 57 13 chr5 11911208 11911376 -187718774 - MER39 LTR ERV1 0 707 364 2636 119 8 99 chr5 11911401 11911898 -187718252 + LTR12 LTR ERV1 27 478 -236 845 194 58 51 chr5 11911898 11912344 -187717806 - MER39 LTR ERV1 -157 550 1 1897 136 51 0 chr5 11912366 11912661 -187717489 + AluSg SINE Alu 1 310 0 417 310 158 10 chr5 11912669 11912872 -187717278 + MIR SINE MIR 29 261 -1 1494 178 69 7 chr5 11913232 11913508 -187716642 + AluJo SINE Alu 1 293 -19 21 0 0 56 chr5 11913901 11913918 -187716232 + AT_rich Low_complexity Low_complexity 1 17 -17 1486 41 0 0 chr5 11913918 11914089 -187716061 + AluY SINE Alu 123 293 -18 21 0 0 56 chr5 11914089 11914107 -187716043 + AT_rich Low_complexity Low_complexity 17 34 0 1217 75 6 13 chr5 11914606 11914765 -187715385 + AluY SINE Alu 1 158 -153 443 328 63 25 chr5 11914934 11915008 -187715142 + L1MC4a LINE L1 5632 5702 -2106 2030 116 34 3 chr5 11915008 11915300 -187714850 + AluSx SINE Alu 1 301 -11 443 328 63 25 chr5 11915300 11915509 -187714641 + L1MC4a LINE L1 5702 5926 -1882 23 54 0 0 chr5 11916438 11916475 -187713675 + AT_rich Low_complexity Low_complexity 1 37 0 241 203 0 87 chr5 11916664 11916733 -187713417 + MLT1K LTR MaLR 492 554 -34 1795 169 36 109 chr5 11917010 11917094 -187713056 + MLT1C LTR MaLR 7 96 -371 1985 121 33 16 chr5 11917094 11917400 -187712750 + AluSx SINE Alu 2 312 0 1795 169 36 109 chr5 11917400 11917812 -187712338 + MLT1C LTR MaLR 96 467 0 360 0 0 0 chr5 11918319 11918359 -187711791 + (CA)n Simple_repeat Simple_repeat 1 40 0 1360 263 43 17 chr5 11919089 11919439 -187710711 - MLT1I LTR MaLR -3 406 48 1728 159 77 30 chr5 11919627 11919991 -187710159 - MLT1B LTR MaLR -2 388 8 2301 198 35 71 chr5 11920588 11921163 -187708987 + MLT2B3 LTR ERVL 1 554 0 2123 126 7 0 chr5 11921378 11921680 -187708470 + AluSx SINE Alu 7 310 -2 804 262 151 70 chr5 11922031 11922401 -187707749 - MLT1I LTR MaLR -8 401 2 1656 149 76 41 chr5 11923987 11924328 -187705822 - THE1C LTR MaLR -33 342 1 1768 120 19 0 chr5 11924400 11924659 -187705491 - AluSg1 SINE Alu -5 304 41 1052 233 165 16 chr5 11924858 11925472 -187704678 - LTR50 LTR ERVL -2 793 1 234 301 154 0 chr5 11925640 11925763 -187704387 + MIR3 SINE MIR 42 183 -25 21 0 0 0 chr5 11927297 11927318 -187702832 + AT_rich Low_complexity Low_complexity 1 21 0 206 279 0 0 chr5 11927671 11927714 -187702436 + L2 LINE L2 3268 3310 -3 1605 230 25 42 chr5 11927991 11928465 -187701685 + L1 LINE L1 3526 3991 -2155 1099 217 156 44 chr5 11928469 11928640 -187701510 + L1 LINE L1 4098 4248 -1898 1582 194 14 17 chr5 11928640 11928934 -187701216 + AluJb SINE Alu 6 298 -14 1099 217 156 44 chr5 11928934 11929172 -187700978 + L1 LINE L1 4248 4553 -1593 240 35 0 0 chr5 11929476 11929505 -187700645 + (TTA)n Simple_repeat Simple_repeat 2 30 0 1299 208 21 4 chr5 11929507 11929747 -187700403 - AluJo SINE Alu -30 282 39 2140 83 79 0 chr5 11930815 11931105 -187699045 + AluSp SINE Alu 1 313 0 891 313 50 37 chr5 11931527 11932183 -187697967 - HAL1b LINE L1 -539 809 145 278 248 9 0 chr5 11932235 11932344 -187697806 + CT-rich Low_complexity Low_complexity 1 110 0 5331 221 37 50 chr5 11932506 11933274 -187696876 + L1MC/D LINE L1 3519 4296 -1850 1483 131 5 5 chr5 11933274 11933488 -187696662 + AluSg/x SINE Alu 84 297 -13 5331 221 37 50 chr5 11933488 11934433 -187695717 + L1MC/D LINE L1 4296 5209 -937 770 153 0 96 chr5 11934434 11934591 -187695559 + FLAM_C SINE Alu 2 143 0 1217 213 20 16 chr5 11934593 11934639 -187695511 + L1MC/D LINE L1 5198 5242 -1087 2170 102 0 39 chr5 11934639 11934944 -187695206 + AluSx SINE Alu 1 293 -19 1217 213 20 16 chr5 11934944 11935275 -187694875 + L1MC/D LINE L1 5242 5583 -746 2084 138 38 30 chr5 11935323 11935692 -187694458 + THE1C LTR MaLR 4 375 0 2105 210 56 150 chr5 11935692 11936220 -187693930 + L1ME1 LINE L1 5364 5922 -242 480 101 0 0 chr5 11936220 11936289 -187693861 + Alu SINE Alu 241 309 -1 2105 210 56 150 chr5 11936289 11936506 -187693644 + L1ME1 LINE L1 5922 6158 -6 2046 143 0 0 chr5 11937397 11937691 -187692459 + AluSx SINE Alu 1 294 -18 566 335 109 65 chr5 11938111 11938188 -187691962 + L3 LINE CR1 472 544 -1033 1550 147 45 54 chr5 11938188 11938501 -187691649 + AluJb SINE Alu 3 312 0 566 335 109 65 chr5 11938501 11939277 -187690873 + L3 LINE CR1 544 1377 -200 1799 136 24 21 chr5 11939277 11939564 -187690586 + AluJb SINE Alu 22 309 -3 566 335 109 65 chr5 11939564 11939695 -187690455 + L3 LINE CR1 1377 1501 -76 22 0 0 0 chr5 11940500 11940522 -187689628 + AT_rich Low_complexity Low_complexity 1 22 0 2411 99 0 0 chr5 11940618 11940930 -187689220 - AluSx SINE Alu 0 312 1 720 138 0 18 chr5 11941827 11941936 -187688214 + MLT1B LTR MaLR 2 108 -282 2297 110 0 7 chr5 11941939 11942249 -187687901 + AluSx SINE Alu 1 308 -4 221 167 50 0 chr5 11942250 11942310 -187687840 + (TATAA)n Simple_repeat Simple_repeat 5 67 0 565 255 66 14 chr5 11944102 11944314 -187685836 - L3 LINE CR1 -72 1505 1283 229 299 13 0 chr5 11944594 11944671 -187685479 - L3 LINE CR1 -353 1224 1147 1151 252 74 24 chr5 11945565 11945986 -187684164 - MLT1L LTR MaLR -8 607 166 311 317 84 12 chr5 11946878 11947045 -187683105 - L3 LINE CR1 -769 808 630 2278 92 63 20 chr5 11947281 11947630 -187682520 - THE1B LTR MaLR 0 364 1 12103 77 12 3 chr5 11947630 11949182 -187680968 - THE1B-int LTR MaLR 0 1580 15 1756 128 176 10 chr5 11949182 11949494 -187680656 - THE1B LTR MaLR 0 364 1 405 253 153 0 chr5 11949844 11950014 -187680136 + L2 LINE L2 3118 3313 0 202 225 0 0 chr5 11950588 11950628 -187679522 + (CATATA)n Simple_repeat Simple_repeat 5 44 0 932 96 0 8 chr5 11951746 11951871 -187678279 - FLAM_C SINE Alu -19 124 1 430 196 112 28 chr5 11951871 11952014 -187678136 + MER104 DNA Tc2 26 180 0 452 154 13 0 chr5 11952333 11952411 -187677739 - L1MC4 LINE L1 -4 8038 7960 1128 180 234 0 chr5 11952417 11952656 -187677494 - AluJb SINE Alu -17 295 1 2911 257 98 22 chr5 11952658 11953769 -187676381 - L1MC4 LINE L1 -76 7966 6771 286 285 168 0 chr5 11954460 11954836 -187675314 + L2 LINE L2 1986 2424 -890 234 158 0 0 chr5 11954845 11954883 -187675267 + tRNA-Leu-TTG tRNA tRNA 3 40 -46 356 271 191 11 chr5 11954895 11955168 -187674982 + L2 LINE L2 2415 2736 -578 313 256 120 0 chr5 11955442 11955559 -187674591 + L2 LINE L2 3182 3312 -1 1829 166 3 7 chr5 11955647 11955949 -187674201 + AluJo SINE Alu 1 301 -11 300 185 84 34 chr5 11956048 11956167 -187673983 - L2 LINE L2 0 3272 3148 2145 136 0 0 chr5 11957772 11958067 -187672083 + AluSx SINE Alu 1 295 -17 2253 105 52 47 chr5 11961114 11961476 -187668674 + THE1B LTR MaLR 1 364 0 2394 92 0 0 chr5 11961476 11961770 -187668380 - AluSg SINE Alu -16 294 1 1048 209 39 9 chr5 11961772 11962002 -187668148 + L1MB3 LINE L1 5940 6176 -7 28 0 0 0 chr5 11962009 11962037 -187668113 + AT_rich Low_complexity Low_complexity 1 28 0 2512 58 0 26 chr5 11963670 11963983 -187666167 + AluY SINE Alu 1 305 -6 527 244 142 20 chr5 11964166 11964363 -187665787 + MIR SINE MIR 3 223 -39 957 189 124 57 chr5 11964372 11964439 -187665711 - MLT1D LTR MaLR -2 503 442 2353 94 3 3 chr5 11964439 11964747 -187665403 + AluSp SINE Alu 1 308 -5 957 189 124 57 chr5 11964747 11965095 -187665055 - MLT1D LTR MaLR -63 442 1 15241 118 30 33 chr5 11965462 11966928 -187663222 - Tigger1 DNA MER2_type 0 2418 949 2314 92 24 0 chr5 11966928 11967223 -187662927 + AluSg SINE Alu 1 302 -8 15241 118 30 33 chr5 11967223 11968140 -187662010 - Tigger1 DNA MER2_type -1469 949 40 679 204 0 23 chr5 11968140 11968272 -187661878 + FLAM_A SINE Alu 4 132 -1 15241 118 30 33 chr5 11968272 11968311 -187661839 - Tigger1 DNA MER2_type -2378 40 2 2030 142 13 7 chr5 11968354 11968656 -187661494 + AluJo SINE Alu 1 304 -8 2365 106 0 3 chr5 11968865 11969177 -187660973 + AluY SINE Alu 1 311 0 1891 165 3 3 chr5 11969191 11969488 -187660662 + AluJb SINE Alu 1 297 -15 1812 178 31 43 chr5 11969634 11969874 -187660276 - L1MB8 LINE L1 -1 6177 5943 2029 117 3 43 chr5 11969874 11970198 -187659952 + AluSx SINE Alu 1 311 -1 1812 178 31 43 chr5 11970198 11970378 -187659772 - L1MB8 LINE L1 -235 5943 5762 1678 147 4 19 chr5 11971076 11971334 -187658816 - AluJo SINE Alu -25 287 34 854 120 15 0 chr5 11972278 11972411 -187657739 - FRAM SINE Alu -24 152 18 1685 117 58 21 chr5 11972709 11973000 -187657150 + AluSx SINE Alu 2 303 -9 189 200 40 0 chr5 11973032 11973082 -187657068 + MIR SINE MIR 67 118 -144 510 239 28 34 chr5 11973132 11973308 -187656842 - MIR SINE MIR -70 192 18 252 0 0 0 chr5 11973615 11973643 -187656507 + (A)n Simple_repeat Simple_repeat 1 28 0 201 290 32 0 chr5 11974789 11974851 -187655299 - L2 LINE L2 -345 2968 2905 284 185 19 0 chr5 11975786 11975840 -187654310 - MER20 DNA MER1_type -6 213 159 1303 94 11 11 chr5 11976159 11976340 -187653810 + AluSg/x SINE Alu 118 298 -12 24 0 0 0 chr5 11976630 11976654 -187653496 + AT_rich Low_complexity Low_complexity 1 24 0 1954 118 10 20 chr5 11976752 11977049 -187653101 + AluSx SINE Alu 1 294 -18 658 152 27 0 chr5 11977129 11977241 -187652909 - FLAM_A SINE Alu -8 134 20 462 177 0 0 chr5 11977396 11977475 -187652675 - MER2 DNA MER2_type -266 79 1 252 167 0 0 chr5 11977476 11977518 -187652632 - MER2 DNA MER2_type -303 42 1 193 278 133 0 chr5 11977561 11977651 -187652499 + MIR SINE MIR 113 214 -48 820 244 173 24 chr5 11978632 11979042 -187651108 + L1MC4 LINE L1 7483 7953 -89 321 188 24 71 chr5 11979162 11979247 -187650903 - L2 LINE L2 -4 3309 3229 363 224 0 0 chr5 11980146 11980204 -187649946 + AluJ/FLAM SINE Alu 1 58 -244 230 190 0 17 chr5 11980379 11980437 -187649713 + (TA)n Simple_repeat Simple_repeat 2 58 0 2098 117 0 0 chr5 11980910 11981191 -187648959 + AluSc SINE Alu 5 285 -24 189 0 0 0 chr5 11981195 11981216 -187648934 + (TAAA)n Simple_repeat Simple_repeat 3 23 0 1902 31 0 0 chr5 11981336 11981561 -187648589 - L1PA4 LINE L1 -1 6154 5930 228 100 0 0 chr5 11981685 11981725 -187648425 + (TTTTTG)n Simple_repeat Simple_repeat 5 44 0 234 0 0 0 chr5 11982470 11982496 -187647654 + (CA)n Simple_repeat Simple_repeat 2 27 0 775 201 24 6 chr5 11983366 11983530 -187646620 + FRAM SINE Alu 2 168 -8 2620 115 5 3 chr5 11983590 11983974 -187646176 - L1PA10 LINE L1 -15 6153 5769 655 240 84 24 chr5 11983983 11984213 -187645937 - L1MC4 LINE L1 -1020 7022 6689 2527 39 0 36 chr5 11984905 11985240 -187644910 - L1PA3 LINE L1 0 6155 5833 6793 62 26 2 chr5 11985400 11987024 -187643126 + L1PA8 LINE L1 4509 6166 -6 203 273 18 18 chr5 11987115 11987170 -187642980 + L2 LINE L2 3259 3313 0 407 169 0 0 chr5 11987395 11987460 -187642690 + MER89 LTR ERV1 7 71 -488 1581 223 29 14 chr5 11987464 11987818 -187642332 + MER89 LTR ERV1 181 539 -20 743 216 30 10 chr5 11987820 11988019 -187642131 + MLT1A1 LTR MaLR 1 203 -162 810 315 108 11 chr5 11988398 11988517 -187641633 - L2 LINE L2 -4 3309 3203 2520 197 14 18 chr5 11988517 11989024 -187641126 + MLT1D LTR MaLR 1 505 0 810 315 108 11 chr5 11989024 11989358 -187640792 - L2 LINE L2 -110 3203 2812 447 302 17 22 chr5 11989367 11989546 -187640604 - MER5B DNA MER1_type 0 178 1 403 338 45 13 chr5 11989546 11989573 -187640577 - L2 LINE L2 -503 2811 2787 198 0 0 0 chr5 11989573 11989595 -187640555 + (CAAAA)n Simple_repeat Simple_repeat 3 24 0 403 338 45 13 chr5 11989595 11989710 -187640440 - L2 LINE L2 -527 2787 2664 365 304 98 47 chr5 11989711 11989925 -187640225 - L2 LINE L2 -1098 2216 1992 956 309 53 25 chr5 11989953 11990351 -187639799 - LTR16A LTR ERVL -7 443 35 226 207 0 107 chr5 11990914 11991064 -187639086 + A-rich Low_complexity Low_complexity 3 136 0 2972 271 96 26 chr5 11991225 11993694 -187636456 + L1MC/D LINE L1 2675 5361 -881 234 0 0 0 chr5 11993694 11993720 -187636430 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 2972 271 96 26 chr5 11993720 11993987 -187636163 + L1MC/D LINE L1 5361 5608 -634 1645 180 9 27 chr5 11994150 11994483 -187635667 - L1 LINE L1 -1977 4169 3843 1831 128 3 48 chr5 11994859 11995149 -187635001 - AluSx SINE Alu -35 277 1 24 67 0 0 chr5 11995197 11995242 -187634908 + AT_rich Low_complexity Low_complexity 1 45 0 10475 173 17 10 chr5 11995525 11997603 -187632547 + L1P LINE L1 1550 3642 -2504 3106 161 15 22 chr5 11997703 11998299 -187631851 + MER39B LTR ERV1 57 648 -5 449 325 65 50 chr5 11998948 11999220 -187630930 + MLT1K LTR MaLR 7 286 -302 1962 154 103 10 chr5 11999220 11999610 -187630540 + MSTA LTR MaLR 1 426 -2 449 325 65 50 chr5 11999610 11999660 -187630490 + MLT1K LTR MaLR 286 334 -254 401 330 135 0 chr5 11999716 11999903 -187630247 - MIR SINE MIR -13 249 40 648 319 63 77 chr5 12000226 12001002 -187629148 + L2 LINE L2 2399 3185 -128 750 82 0 0 chr5 12001397 12001494 -187628656 + L1PA10 LINE L1 6056 6152 -16 633 178 0 0 chr5 12001568 12001675 -187628475 + 7SLRNA srpRNA srpRNA 213 319 -1 21 36 0 0 chr5 12001749 12001777 -187628373 + AT_rich Low_complexity Low_complexity 1 28 0 362 301 44 56 chr5 12002928 12003159 -187626991 - MIR SINE MIR 0 262 36 1779 208 208 4 chr5 12003662 12004129 -187626021 - MLT1F1 LTR MaLR -1 566 5 346 333 23 34 chr5 12004793 12004970 -187625180 + HAL1 LINE L1 1116 1290 -1217 613 332 76 4 chr5 12005353 12005591 -187624559 + MIR SINE MIR 8 262 0 1142 145 6 0 chr5 12006595 12006767 -187623383 - LTR8 LTR ERV1 -9 682 510 7509 34 6 7 chr5 12006770 12008421 -187621729 - L1PA3 LINE L1 -3 6152 4505 8443 163 7 7 chr5 12008567 12009260 -187620890 + L1PA11 LINE L1 3644 4336 -1838 2826 7 0 0 chr5 12009260 12009566 -187620584 + AluY SINE Alu 1 306 -5 8443 163 7 7 chr5 12009566 12011415 -187618735 + L1PA11 LINE L1 4335 6172 -2 228 100 0 0 chr5 12013081 12013121 -187617029 + (TA)n Simple_repeat Simple_repeat 2 41 0 192 40 0 0 chr5 12013120 12013145 -187617005 + (TC)n Simple_repeat Simple_repeat 2 26 0 * 3357 197 65 17 chr5 12013775 12014558 -187615592 + L1MB8 LINE L1 5352 6172 -6 217 354 42 0 chr5 12014816 12014912 -187615238 + L2 LINE L2 3173 3272 0 234 91 0 0 chr5 12016122 12016155 -187613995 + (TG)n Simple_repeat Simple_repeat 1 33 0 22 35 0 0 chr5 12016494 12016523 -187613627 + AT_rich Low_complexity Low_complexity 1 29 0 605 164 98 0 chr5 12017617 12017739 -187612411 - L1MB8 LINE L1 -5 6173 6040 472 161 120 16 chr5 12017834 12018026 -187612124 - L1MB8 LINE L1 -170 6008 5797 799 188 56 64 chr5 12018625 12018859 -187611291 - MER96B DNA MER1_type? -185 232 1 814 154 19 0 chr5 12019402 12019564 -187610586 + (TAGA)n Simple_repeat Simple_repeat 4 168 0 193 303 43 99 chr5 12020343 12020505 -187609645 + L2 LINE L2 3115 3267 -5 4862 91 1 41 chr5 12020742 12021523 -187608627 + L1P LINE L1 2 751 -5395 233 219 62 0 chr5 12022309 12022373 -187607777 + L3 LINE CR1 792 859 -718 355 289 243 14 chr5 12022541 12022759 -187607391 + L3 LINE CR1 967 1234 -343 2131 49 0 0 chr5 12022817 12023063 -187607087 + AluY SINE Alu 55 300 -11 315 313 23 47 chr5 12023068 12023196 -187606954 + L3 LINE CR1 1383 1507 -70 7423 101 7 19 chr5 12024320 12025405 -187604745 + MER11C LTR ERVK 1 1071 0 254 302 16 0 chr5 12025477 12025540 -187604610 - MIR SINE MIR -104 104 41 954 187 34 10 chr5 12026622 12026831 -187603319 + MER61C LTR ERV1 216 429 -5 279 0 0 0 chr5 12026871 12026902 -187603248 + (CA)n Simple_repeat Simple_repeat 1 31 0 202 281 52 118 chr5 12027503 12027638 -187602512 - MIR3 SINE MIR -45 163 38 2256 105 13 7 chr5 12027774 12028079 -187602071 + AluSg SINE Alu 3 309 -1 326 315 124 41 chr5 12028372 12028639 -187601511 + L2 LINE L2 2929 3217 -96 620 334 128 17 chr5 12028711 12028928 -187601222 - L2 LINE L2 -25 3288 3097 1633 182 0 47 chr5 12028928 12029246 -187600904 + AluJo SINE Alu 1 303 -9 620 334 128 17 chr5 12029246 12029664 -187600486 - L2 LINE L2 -216 3097 2591 295 138 313 25 chr5 12029668 12029748 -187600402 + MER51A LTR ERV1 1 103 -531 * 2280 111 2 34 chr5 12029742 12030089 -187600061 + MER51B LTR ERV1 50 377 0 262 291 0 0 chr5 12030098 12030177 -187599973 - L2 LINE L2 -741 2573 2495 244 184 13 92 chr5 12030185 12030261 -187599889 - L1MA10 LINE L1 -552 5782 5713 2395 158 59 20 chr5 12030262 12030768 -187599382 + L1MA10 LINE L1 5806 6331 -3 1377 303 141 11 chr5 12030819 12031555 -187598595 - L2 LINE L2 -865 2449 1618 2647 124 11 49 chr5 12031770 12032215 -187597935 - MSTA LTR MaLR 0 428 1 1872 134 16 26 chr5 12035081 12035387 -187594763 + AluJb SINE Alu 3 305 -7 2128 92 0 3 chr5 12035579 12035883 -187594267 - AluY SINE Alu -8 303 1 20686 32 13 0 chr5 12036178 12039931 -187590219 - L1P LINE L1 -733 5422 1630 572 106 0 62 chr5 12039931 12040044 -187590106 - LTR8 LTR ERV1 -176 515 410 * 887 138 0 22 chr5 12040038 12040176 -187589974 - LTR8 LTR ERV1 -556 135 1 359 129 38 53 chr5 12040370 12040493 -187589657 + MER61B LTR ERV1 2 216 -209 420 141 94 0 chr5 12040610 12040695 -187589455 + LTR49 LTR ERV1 154 246 -349 458 181 96 50 chr5 12040713 12040945 -187589205 + LTR48 LTR ERV1 300 739 -48 1205 167 5 33 chr5 12041659 12041788 -187588362 + MER3 DNA MER1_type 1 123 -86 1884 115 0 0 chr5 12041788 12042032 -187588118 - AluSg SINE Alu -15 295 52 1205 167 5 33 chr5 12042032 12042117 -187588033 + MER3 DNA MER1_type 123 209 0 586 193 56 43 chr5 12042468 12042629 -187587521 + LTR23 LTR ERV1 275 437 0 333 0 0 0 chr5 12043921 12043958 -187586192 + (CA)n Simple_repeat Simple_repeat 2 38 0 288 0 0 0 chr5 12046475 12046507 -187583643 + (GA)n Simple_repeat Simple_repeat 2 33 0 1342 177 27 10 chr5 12046776 12047193 -187582957 - LTR54 LTR ERV1 0 510 1 3835 206 26 30 chr5 12047640 12049070 -187581080 + L1MA9 LINE L1 4361 5788 -524 241 191 16 48 chr5 12049093 12049156 -187580994 - L1M2 LINE L1 -512 5788 5728 2311 196 46 24 chr5 12049180 12049477 -187580673 + L1MA9 LINE L1 5776 6091 -221 1975 81 0 8 chr5 12049477 12049775 -187580375 - AluY SINE Alu 0 333 38 2311 196 46 24 chr5 12049775 12049977 -187580173 + L1MA9 LINE L1 6091 6287 -25 697 295 33 26 chr5 12050011 12050282 -187579868 + MLT1K LTR MaLR 307 579 -9 331 241 35 23 chr5 12051893 12051980 -187578170 - L2 LINE L2 -16 3297 3210 354 236 50 36 chr5 12052028 12052168 -187577982 + L1MC4 LINE L1 7900 8041 -1 2481 46 19 10 chr5 12052482 12052789 -187577361 + AluY SINE Alu 1 310 -1 207 0 0 0 chr5 12052881 12052904 -187577246 + (A)n Simple_repeat Simple_repeat 1 23 0 279 0 0 0 chr5 12053326 12053357 -187576793 + (TTA)n Simple_repeat Simple_repeat 3 33 0 306 30 0 0 chr5 12053357 12053390 -187576760 - L1PA6 LINE L1 -18 6136 6104 1457 229 66 92 chr5 12054286 12054850 -187575300 - MLT1E2 LTR MaLR -2 624 76 302 281 118 30 chr5 12054757 12054892 -187575258 - MLT2C1 LTR ERVL -199 198 52 * 225 154 0 0 chr5 12055188 12055227 -187574923 + (TA)n Simple_repeat Simple_repeat 1 39 0 2227 115 0 16 chr5 12055227 12055540 -187574610 - AluSx SINE Alu -4 308 1 497 273 32 7 chr5 12055984 12056138 -187574012 + LTR67 LTR ERVL 400 557 0 1441 179 3 102 chr5 12056496 12056820 -187573330 + AluJo SINE Alu 1 292 -20 1301 136 19 0 chr5 12056934 12057148 -187573002 + L1MA4 LINE L1 6077 6294 -6 297 0 0 0 chr5 12057351 12057384 -187572766 + (TG)n Simple_repeat Simple_repeat 1 33 0 1832 132 13 55 chr5 12057615 12057926 -187572224 - AluSq SINE Alu -14 299 2 2308 100 3 0 chr5 12057939 12058240 -187571910 - AluSc SINE Alu -7 302 1 2065 136 3 7 chr5 12058268 12058578 -187571572 - AluSg1 SINE Alu 0 309 1 235 311 41 33 chr5 12058657 12058779 -187571371 + LTR67 LTR ERVL 421 543 -14 376 295 54 27 chr5 12060355 12060504 -187569646 - MIR SINE MIR -97 165 13 2228 105 0 10 chr5 12061483 12061778 -187568372 + AluSg SINE Alu 3 294 -16 2375 75 0 31 chr5 12061780 12062101 -187568049 + AluY SINE Alu 1 311 0 369 0 0 0 chr5 12062111 12062152 -187567998 + (TG)n Simple_repeat Simple_repeat 1 41 0 216 0 0 0 chr5 12062151 12062175 -187567975 + (GA)n Simple_repeat Simple_repeat 1 24 0 * 601 264 37 12 chr5 12062550 12062713 -187567437 - MER5A DNA MER1_type -7 182 16 317 167 56 158 chr5 12062765 12062980 -187567170 + L1M4 LINE L1 4969 5161 -985 1900 109 21 0 chr5 12062981 12063264 -187566886 - AluSq SINE Alu -15 298 10 561 193 82 7 chr5 12063565 12063700 -187566450 - Charlie4 DNA MER1_type -1812 149 5 1950 131 25 0 chr5 12064468 12064750 -187565400 + AluY SINE Alu 1 289 -22 21 36 0 0 chr5 12067063 12067091 -187563059 + AT_rich Low_complexity Low_complexity 1 28 0 1952 115 39 11 chr5 12068178 12068464 -187561686 + AluSq SINE Alu 1 294 -19 331 252 142 45 chr5 12069815 12069970 -187560180 - MIR SINE MIR -87 175 6 1361 167 123 0 chr5 12070793 12071069 -187559081 + MER2 DNA MER2_type 10 319 -26 765 222 81 0 chr5 12071475 12071660 -187558490 + Charlie1a DNA MER1_type 5 204 -1251 1615 168 28 7 chr5 12071686 12071971 -187558179 + AluJo SINE Alu 1 291 -21 1133 154 254 7 chr5 12071972 12072251 -187557899 + Charlie1a DNA MER1_type 739 1086 -369 1357 168 16 29 chr5 12072266 12072510 -187557640 + AluJo SINE Alu 1 241 -71 3801 135 49 25 chr5 12072511 12072652 -187557498 - MER50 LTR ERV1 -23 711 575 2283 101 0 7 chr5 12072652 12072960 -187557190 + AluSx SINE Alu 1 306 -6 3801 135 49 25 chr5 12072960 12073512 -187556638 - MER50 LTR ERV1 -159 575 1 412 138 0 0 chr5 12073512 12073570 -187556580 + AluJo SINE Alu 238 295 -17 1674 226 96 35 chr5 12073857 12074088 -187556062 + MLT1E2 LTR MaLR 1 216 -410 1947 131 30 0 chr5 12074088 12074386 -187555764 + AluSx SINE Alu 1 307 -5 1674 226 96 35 chr5 12074386 12074742 -187555408 + MLT1E2 LTR MaLR 216 619 -7 321 342 45 42 chr5 12074891 12074963 -187555187 + MLT1I LTR MaLR 44 114 -295 3300 122 75 62 chr5 12074963 12075432 -187554718 + MER39B LTR ERV1 5 486 -167 1717 153 30 0 chr5 12075432 12075700 -187554450 + AluJo SINE Alu 12 287 -25 3300 122 75 62 chr5 12075700 12075870 -187554280 + MER39B LTR ERV1 486 652 -1 321 342 45 42 chr5 12075870 12076110 -187554040 + MLT1I LTR MaLR 114 357 -52 1737 176 0 31 chr5 12076211 12076529 -187553621 + AluJb SINE Alu 1 308 -4 1412 171 89 0 chr5 12077003 12077261 -187552889 - MER50 LTR ERV1 -23 711 431 661 80 23 0 chr5 12077272 12077360 -187552790 - THE1C LTR MaLR -285 90 1 1725 123 31 0 chr5 12077704 12077964 -187552186 - MER50 LTR ERV1 -466 268 1 275 238 60 24 chr5 12078557 12078641 -187551509 + MLT1L LTR MaLR 527 613 -2 2944 101 0 5 chr5 12078827 12079204 -187550946 - THE1C LTR MaLR 0 375 1 954 216 96 96 chr5 12079736 12080204 -187549946 - LTR34 LTR ERV1 -4 695 136 425 180 72 18 chr5 12080282 12080393 -187549757 - MER4A LTR ERV1 -547 117 1 353 261 45 9 chr5 12080495 12080606 -187549544 + Charlie5 DNA MER1_type 34 148 -2464 2256 99 10 0 chr5 12080608 12080910 -187549240 + AluSx SINE Alu 1 305 -7 2382 185 57 41 chr5 12080916 12081269 -187548881 + Charlie5 DNA MER1_type 1975 2344 -280 2163 126 10 0 chr5 12081269 12081571 -187548579 - AluSx SINE Alu -7 305 1 2382 185 57 41 chr5 12081571 12081827 -187548323 + Charlie5 DNA MER1_type 2344 2594 -30 223 217 0 0 chr5 12082311 12082357 -187547793 - MIR SINE MIR -115 147 102 4795 161 48 9 chr5 12082361 12083223 -187546927 - MER54A LTR ERVL -6 895 1 2366 85 7 0 chr5 12083723 12084018 -187546132 - AluSx SINE Alu -15 297 1 1979 146 0 10 chr5 12084092 12084417 -187545733 - AluSx SINE Alu 0 312 1 2155 116 0 0 chr5 12084956 12085250 -187544900 - AluSx SINE Alu -18 294 1 1684 180 3 10 chr5 12085399 12085694 -187544456 - AluJo SINE Alu -19 293 1 2288 96 0 0 chr5 12086054 12086347 -187543803 + AluSx SINE Alu 1 293 -19 1901 152 13 3 chr5 12086677 12086980 -187543170 + AluJb SINE Alu 1 306 -6 2333 84 0 7 chr5 12086988 12087285 -187542865 + AluSg SINE Alu 3 297 -13 1859 113 55 4 chr5 12087672 12087946 -187542204 + AluSx SINE Alu 1 288 -24 2291 144 34 3 chr5 12088606 12088961 -187541189 + MER47A DNA MER2_type 1 366 0 1745 169 3 13 chr5 12089165 12089347 -187540803 - AluJo SINE Alu -1 311 132 2224 103 7 0 chr5 12089347 12089643 -187540507 - AluSg SINE Alu -12 298 6 1745 169 3 13 chr5 12089643 12089774 -187540376 - AluJo SINE Alu -180 132 1 2102 125 0 3 chr5 12089862 12090167 -187539983 - AluJb SINE Alu 0 312 9 246 232 295 11 chr5 12090247 12090342 -187539808 - MIR SINE MIR -55 153 32 1380 283 66 15 chr5 12091338 12091739 -187538411 + L1PB3 LINE L1 5663 6080 -74 40 17 0 17 chr5 12091851 12091881 -187538269 + AT_rich Low_complexity Low_complexity 1 31 -26 1813 107 3 75 chr5 12091881 12092200 -187537950 - AluSx SINE Alu -16 296 1 40 17 0 17 chr5 12092200 12092227 -187537923 + AT_rich Low_complexity Low_complexity 31 57 0 1412 58 48 19 chr5 12092235 12092443 -187537707 + AluSq SINE Alu 79 292 -21 377 281 57 62 chr5 12093355 12093565 -187536585 + MIR SINE MIR 11 219 -43 328 324 14 28 chr5 12093660 12093805 -187536345 + MIR SINE MIR 85 227 -35 2614 23 3 0 chr5 12095174 12095484 -187534666 + AluY SINE Alu 1 311 0 356 306 113 18 chr5 12095498 12095727 -187534423 + L1MEd LINE L1 508 758 -5361 489 174 12 0 chr5 12095856 12095942 -187534208 - HY1 scRNA scRNA -25 87 1 1370 183 36 36 chr5 12096002 12096303 -187533847 - AluJb SINE Alu -9 303 3 2252 89 7 3 chr5 12096336 12096639 -187533511 + AluSq SINE Alu 1 304 -9 488 256 84 59 chr5 12096811 12097014 -187533136 + L1MEd LINE L1 2878 3085 -3044 1743 203 15 3 chr5 12097014 12097339 -187532811 - MLT1A1 LTR MaLR -1 364 36 287 248 176 0 chr5 12097360 12097513 -187532637 + L1M4 LINE L1 4664 4843 -1303 2035 262 85 19 chr5 12097515 12098085 -187532065 - L2 LINE L2 0 3313 2782 1603 166 49 11 chr5 12098085 12098369 -187531781 + AluJo SINE Alu 1 295 -17 2035 262 85 19 chr5 12098369 12098814 -187531336 - L2 LINE L2 -531 2782 2227 233 235 0 141 chr5 12098823 12098878 -187531272 - MER82 DNA MER2_type 0 653 612 2230 97 0 3 chr5 12098878 12099177 -187530973 - AluSq SINE Alu -15 298 1 233 235 0 141 chr5 12099177 12099206 -187530944 - MER82 DNA MER2_type -41 612 581 1465 186 45 13 chr5 12099275 12099590 -187530560 + MLT1A1 LTR MaLR 1 431 -36 2061 204 37 19 chr5 12099610 12100042 -187530108 - MER82 DNA MER2_type -177 476 37 1672 118 0 0 chr5 12100080 12100318 -187529832 - AluSx SINE Alu -19 293 56 1346 262 105 62 chr5 12100348 12100718 -187529432 - L2 LINE L2 -1105 2209 1856 2057 148 0 0 chr5 12100718 12101029 -187529121 + AluSx SINE Alu 1 311 -1 1346 262 105 62 chr5 12101029 12101103 -187529047 - L2 LINE L2 -1458 1856 1787 2088 113 3 0 chr5 12101103 12101403 -187528747 + AluSq SINE Alu 1 301 -12 1346 262 105 62 chr5 12101403 12101805 -187528345 - L2 LINE L2 -1527 1787 1326 230 208 125 0 chr5 12101814 12101886 -187528264 - L2 LINE L2 -2099 1215 1135 406 225 26 89 chr5 12102227 12102418 -187527732 + L1MC5 LINE L1 7603 7781 -180 1060 88 0 0 chr5 12102424 12102561 -187527589 + AluSq/x SINE Alu 1 137 -175 915 123 43 49 chr5 12102683 12102846 -187527304 + AluJo SINE Alu 113 274 -38 290 88 62 12 chr5 12102849 12102929 -187527221 + (TTTA)n Simple_repeat Simple_repeat 1 84 0 354 184 116 5 chr5 12103472 12103637 -187526513 - MER21A LTR ERV1 -2 929 670 1641 77 4 17 chr5 12103641 12103875 -187526275 - AluSg/x SINE Alu 0 310 80 821 122 0 0 chr5 12104303 12104418 -187525732 + MER4D LTR ERV1 1 115 -788 1256 146 35 22 chr5 12104418 12104644 -187525506 + AluSx SINE Alu 1 229 -83 4345 148 31 37 chr5 12104668 12105474 -187524676 + MER4D LTR ERV1 103 903 0 323 270 27 20 chr5 12105485 12105633 -187524517 - LTR37A LTR ERV1 0 426 278 3405 169 50 72 chr5 12105659 12106131 -187524019 + MER72 LTR ERV1 15 467 -255 1586 166 0 30 chr5 12106131 12106426 -187523724 + AluJo SINE Alu 1 286 -26 3405 169 50 72 chr5 12106426 12106677 -187523473 + MER72 LTR ERV1 467 722 0 671 162 0 0 chr5 12106724 12106823 -187523327 + AluJ/FLAM SINE Alu 2 100 -212 428 190 229 45 chr5 12106838 12107017 -187523133 - LTR37A LTR ERV1 -207 219 8 2085 115 10 0 chr5 12107613 12107918 -187522232 - AluSx SINE Alu 0 312 5 528 168 84 8 chr5 12108020 12108151 -187521999 + LTR37A LTR ERV1 286 426 0 273 302 9 35 chr5 12108412 12108528 -187521622 + G-rich Low_complexity Low_complexity 3 115 0 444 259 5 53 chr5 12109904 12110093 -187520057 + GA-rich Low_complexity Low_complexity 1 180 0 873 163 7 13 chr5 12110244 12110440 -187519710 - FRAM SINE Alu 0 176 1 2179 105 0 22 chr5 12110445 12110760 -187519390 - AluSx SINE Alu -4 308 1 482 208 10 10 chr5 12110887 12110983 -187519167 - MLT2F LTR ERVL -567 96 1 1287 131 149 62 chr5 12111025 12111321 -187518829 + MLT1A1 LTR MaLR 1 332 -33 1957 121 0 0 chr5 12111321 12111637 -187518513 - AluSx SINE Alu 0 316 1 1287 131 149 62 chr5 12111637 12111675 -187518475 + MLT1A1 LTR MaLR 332 365 0 1079 134 31 76 chr5 12111880 12112103 -187518047 - AluJb SINE Alu -14 298 86 243 191 87 95 chr5 12112854 12112980 -187517170 - L1MC4 LINE L1 0 8042 7918 1110 261 105 51 chr5 12113033 12113158 -187516992 + MLT1F LTR MaLR 1 118 -424 2220 107 50 50 chr5 12113158 12113423 -187516727 - THE1B LTR MaLR 0 364 97 2125 112 0 3 chr5 12113423 12113719 -187516431 + AluSq SINE Alu 1 295 -18 2220 107 50 50 chr5 12113719 12113817 -187516333 - THE1B LTR MaLR -266 98 1 1110 261 105 51 chr5 12113817 12113893 -187516257 + MLT1F LTR MaLR 118 188 -354 201 108 0 0 chr5 12113893 12113930 -187516220 + (TG)n Simple_repeat Simple_repeat 2 38 0 1110 261 105 51 chr5 12113930 12114241 -187515909 + MLT1F LTR MaLR 188 542 0 293 248 147 8 chr5 12114253 12114382 -187515768 + MLT1F1-int LTR MaLR 4 150 -1221 840 200 36 0 chr5 12114390 12114555 -187515595 - FRAM SINE Alu -5 171 1 675 292 68 13 chr5 12114570 12114878 -187515272 + MLT1F1-int LTR MaLR 277 601 -770 287 125 0 0 chr5 12114878 12114918 -187515232 - MSTB LTR MaLR 0 428 389 1344 151 8 45 chr5 12114918 12115183 -187514967 + AluJo SINE Alu 1 255 -57 1309 179 12 4 chr5 12115192 12115438 -187514712 - AluJb SINE Alu -43 269 22 1005 136 29 73 chr5 12115446 12115652 -187514498 - MSTB LTR MaLR -229 197 1 341 341 121 0 chr5 12115891 12116064 -187514086 + MLT1F1-int LTR MaLR 692 885 -486 1566 142 0 73 chr5 12116094 12116396 -187513754 - AluJb SINE Alu -32 280 1 492 241 121 7 chr5 12116610 12116751 -187513399 + MLT1F1-int LTR MaLR 1215 1371 0 1377 211 87 30 chr5 12116855 12116894 -187513256 + MLT1F1 LTR MaLR 89 124 -443 2309 149 81 2 chr5 12116894 12117291 -187512859 + MSTC LTR MaLR 1 428 0 1377 211 87 30 chr5 12117291 12117675 -187512475 + MLT1F1 LTR MaLR 124 526 -41 1939 183 64 43 chr5 12117675 12117694 -187512456 + MER74A LTR ERVL 1 18 -540 2089 131 3 6 chr5 12117694 12118007 -187512143 - AluSx SINE Alu 0 312 1 1939 183 64 43 chr5 12118007 12118173 -187511977 + MER74A LTR ERVL 18 179 -379 1855 146 58 18 chr5 12118173 12118503 -187511647 - MER61A LTR ERV1 0 343 1 1939 183 64 43 chr5 12118503 12118754 -187511396 + MER74A LTR ERVL 179 447 -111 2287 82 0 25 chr5 12118755 12119074 -187511076 - AluSx SINE Alu 0 312 2 930 106 12 12 chr5 12119165 12119325 -187510825 + (TTCC)n Simple_repeat Simple_repeat 3 162 0 530 176 15 15 chr5 12119331 12119467 -187510683 + CT-rich Low_complexity Low_complexity 1 136 0 1747 134 12 73 chr5 12119584 12119912 -187510238 - MLT1B LTR MaLR -82 308 1 2301 72 3 0 chr5 12119992 12120285 -187509865 - AluSp SINE Alu -19 294 1 826 173 126 31 chr5 12120628 12121072 -187509078 - Charlie1 DNA MER1_type -1 2760 2186 3634 202 89 10 chr5 12121080 12122339 -187507811 + L1MB8 LINE L1 4810 6174 -4 772 181 7 34 chr5 12122337 12122486 -187507664 + L1ME LINE L1 5421 5565 -601 * 401 234 165 19 chr5 12122662 12122741 -187507409 - LTR41 LTR ERVL -592 181 115 180 0 0 0 chr5 12122741 12122761 -187507389 + (GAAAA)n Simple_repeat Simple_repeat 2 21 0 401 234 165 19 chr5 12122761 12122839 -187507311 - LTR41 LTR ERVL -658 115 1 2236 99 3 0 chr5 12123023 12123326 -187506824 - AluSq SINE Alu -9 304 1 232 244 58 35 chr5 12123328 12123414 -187506736 - LTR33A LTR ERVL -377 146 59 2110 76 32 0 chr5 12123517 12123815 -187506335 - AluSp SINE Alu 0 307 1 1616 146 84 0 chr5 12124171 12124446 -187505704 - AluSx SINE Alu -14 298 1 263 111 0 0 chr5 12124652 12124688 -187505462 + L1MC3 LINE L1 7238 7273 -512 481 95 0 0 chr5 12124692 12124755 -187505395 - LTR3b LTR ERVK 0 500 438 1894 172 49 51 chr5 12124755 12125185 -187504965 - LTR3 LTR ERVK 0 429 1 2184 160 113 15 chr5 12125185 12125215 -187504935 + L1MC3 LINE L1 7271 7297 -488 189 0 0 0 chr5 12125215 12125236 -187504914 + (ATATG)n Simple_repeat Simple_repeat 2 22 0 2184 160 113 15 chr5 12125236 12125667 -187504483 + L1MC3 LINE L1 7297 7777 -8 864 279 54 56 chr5 12126485 12126575 -187503575 - MLT1I LTR MaLR 0 409 320 1526 139 12 90 chr5 12126575 12126794 -187503356 + AluJo SINE Alu 1 189 -123 1762 135 30 20 chr5 12126794 12127097 -187503053 - AluSx SINE Alu -6 306 1 1526 139 12 90 chr5 12127097 12127200 -187502950 + AluJo SINE Alu 189 298 -14 864 279 54 56 chr5 12127200 12127517 -187502633 - MLT1I LTR MaLR -89 320 3 1789 198 72 54 chr5 12127712 12128269 -187501881 - L1ME1 LINE L1 -3 6163 5597 341 249 63 79 chr5 12128277 12128317 -187501833 - L1ME1 LINE L1 -2312 5473 5434 1789 155 3 10 chr5 12128317 12128626 -187501524 - AluJo SINE Alu -4 308 2 341 249 63 79 chr5 12128626 12128650 -187501500 - L1ME1 LINE L1 -2351 5434 5411 588 120 56 9 chr5 12128650 12128758 -187501392 - L1MB3 LINE L1 -4 6179 6067 341 249 63 79 chr5 12128758 12128881 -187501269 - L1ME1 LINE L1 -2374 5411 5288 229 189 0 38 chr5 12128931 12128984 -187501166 + L1M LINE L1 5310 5360 -804 242 280 220 38 chr5 12129432 12129564 -187500586 + MIR SINE MIR 82 237 -25 2192 99 74 42 chr5 12129564 12129917 -187500233 - THE1B LTR MaLR 0 364 1 709 252 52 0 chr5 12130088 12130243 -187499907 + AluJo SINE Alu 13 175 -137 874 202 97 11 chr5 12130861 12131128 -187499022 - Charlie1b DNA MER1_type -125 398 109 875 198 6 0 chr5 12131139 12131311 -187498839 + FRAM SINE Alu 1 173 -3 3071 155 18 26 chr5 12133201 12133809 -187496341 + pTR5 LTR ERV1 742 1344 -1094 4285 124 15 127 chr5 12133825 12134750 -187495400 + LTR12 LTR ERV1 5 826 0 793 231 61 47 chr5 12136445 12136657 -187493493 - MIR SINE MIR 0 262 48 642 177 56 90 chr5 12137364 12137630 -187492520 - L1MC5 LINE L1 -94 7867 7611 2317 63 0 20 chr5 12137687 12137986 -187492164 - AluY SINE Alu -17 294 2 24 0 0 0 chr5 12137990 12138014 -187492136 + AT_rich Low_complexity Low_complexity 1 24 0 713 188 0 0 chr5 12138014 12138131 -187492019 - FLAM_C SINE Alu -25 118 2 297 0 0 0 chr5 12138382 12138415 -187491735 + (TG)n Simple_repeat Simple_repeat 2 34 0 2100 117 0 3 chr5 12138866 12139165 -187490985 + AluSx SINE Alu 1 298 -14 240 232 14 14 chr5 12139615 12139684 -187490466 + CT-rich Low_complexity Low_complexity 1 69 0 1753 123 17 51 chr5 12139685 12139977 -187490173 - AluSx SINE Alu -30 282 1 834 193 76 0 chr5 12139977 12140148 -187490002 + MLT1F1 LTR MaLR 22 205 -362 273 156 0 0 chr5 12140175 12140220 -187489930 + MLT1F1 LTR MaLR 523 567 0 355 223 93 39 chr5 12140220 12140415 -187489735 - L1MC4a LINE L1 -394 7414 7193 3832 166 11 59 chr5 12141239 12141998 -187488152 - MER72 LTR ERV1 0 722 1 2030 117 0 37 chr5 12142026 12142325 -187487825 - AluSx SINE Alu -24 288 1 712 220 128 32 chr5 12142398 12142532 -187487618 - MLT1C LTR MaLR 0 467 303 2027 114 117 30 chr5 12142532 12142573 -187487577 - MSTA LTR MaLR 0 428 392 2265 107 0 32 chr5 12142573 12142883 -187487267 + AluSq SINE Alu 1 300 -13 2027 114 117 30 chr5 12142883 12143235 -187486915 - MSTA LTR MaLR -36 392 1 712 220 128 32 chr5 12143235 12143318 -187486832 - MLT1C LTR MaLR -164 303 229 579 200 57 14 chr5 12143346 12143486 -187486664 - MLT1C LTR MaLR -321 184 39 2035 138 7 0 chr5 12143557 12143853 -187486297 + AluSx SINE Alu 3 300 -12 1942 119 0 48 chr5 12144240 12144551 -187485599 - AluSx SINE Alu -16 296 1 819 159 0 57 chr5 12144579 12144736 -187485414 - AluJo SINE Alu -154 158 11 1995 155 3 0 chr5 12145192 12145488 -187484662 + AluJb SINE Alu 1 297 -15 564 190 129 95 chr5 12145977 12146209 -187483941 + MIR SINE MIR 10 249 -13 2104 157 11 11 chr5 12146541 12146889 -187483261 + MLT2C1 LTR ERVL 1 348 -49 1841 167 42 50 chr5 12146889 12147273 -187482877 - MLT1B LTR MaLR 0 390 10 380 128 64 0 chr5 12147281 12147375 -187482775 + (TCTG)n Simple_repeat Simple_repeat 1 100 0 251 137 0 137 chr5 12147375 12147448 -187482702 + MLT2C1 LTR ERVL 458 520 0 2327 111 0 7 chr5 12147559 12147866 -187482284 - AluSx SINE Alu -7 305 1 2439 74 0 3 chr5 12147928 12148224 -187481926 - AluY SINE Alu -16 295 1 2321 98 3 0 chr5 12148224 12148520 -187481630 - AluSx SINE Alu -15 297 1 587 162 0 0 chr5 12148615 12148720 -187481430 - FRAM SINE Alu -8 168 64 2291 110 3 3 chr5 12148817 12149127 -187481023 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr5 12149127 12149148 -187481002 + AT_rich Low_complexity Low_complexity 1 21 0 1006 229 85 98 chr5 12149154 12149283 -187480867 + L1ME1 LINE L1 5692 5821 -345 2399 88 0 28 chr5 12149283 12149602 -187480548 - AluSg SINE Alu 0 310 1 1006 229 85 98 chr5 12149602 12149921 -187480229 + L1ME1 LINE L1 5821 6134 -32 681 151 19 0 chr5 12149922 12150028 -187480122 + FLAM_C SINE Alu 2 109 -34 1719 174 0 16 chr5 12150100 12150410 -187479740 - AluJb SINE Alu 0 312 8 1666 132 4 0 chr5 12150873 12151108 -187479042 - AluSq SINE Alu -14 299 64 447 208 50 0 chr5 12151392 12151493 -187478657 - MLT1H LTR MaLR 0 549 444 * 914 223 30 47 chr5 12151475 12151785 -187478365 - MLT1H LTR MaLR -248 307 30 187 217 0 0 chr5 12152517 12152563 -187477587 + L2 LINE L2 2911 2956 -316 205 333 0 0 chr5 12153709 12153781 -187476369 + L2 LINE L2 2902 2973 -299 2237 196 52 5 chr5 12154182 12154626 -187475524 + L1MB7 LINE L1 5579 6043 -141 1968 101 7 35 chr5 12154778 12155087 -187475063 - AluY SINE Alu 0 305 5 29 47 0 0 chr5 12156206 12156249 -187473901 + AT_rich Low_complexity Low_complexity 1 43 0 2055 186 38 53 chr5 12156249 12156372 -187473778 + MLT1D LTR MaLR 1 124 -381 2133 101 10 10 chr5 12156372 12156392 -187473758 - AluSx SINE Alu -13 299 280 189 0 0 0 chr5 12156392 12156413 -187473737 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 2133 101 10 10 chr5 12156413 12156690 -187473460 - AluSx SINE Alu -31 281 2 2055 186 38 53 chr5 12156690 12157071 -187473079 + MLT1D LTR MaLR 124 497 -8 963 242 54 0 chr5 12157255 12157478 -187472672 + L1MC4 LINE L1 6800 7034 -1008 1218 156 0 0 chr5 12157491 12157664 -187472486 - AluSq SINE Alu -140 173 1 2030 226 66 20 chr5 12157697 12158290 -187471860 + L1MC4 LINE L1 7043 7662 -380 292 227 93 0 chr5 12158336 12158411 -187471739 + L1MB4 LINE L1 5812 5893 -278 1201 176 146 23 chr5 12158411 12158672 -187471478 + AluSg1 SINE Alu 2 294 -15 2364 104 0 0 chr5 12158674 12158981 -187471169 + AluSx SINE Alu 3 309 -3 1425 160 73 7 chr5 12158990 12159278 -187470872 + L1MB4 LINE L1 5873 6179 -1 1203 167 26 106 chr5 12159320 12159427 -187470723 + L1MC4 LINE L1 7709 7823 -219 808 65 28 0 chr5 12159427 12159534 -187470616 + HY1 scRNA scRNA 2 111 -1 1203 167 26 106 chr5 12159534 12159547 -187470603 + L1MC4 LINE L1 7823 7835 -207 207 114 0 0 chr5 12159547 12159582 -187470568 + (TG)n Simple_repeat Simple_repeat 2 36 0 1203 167 26 106 chr5 12159582 12159598 -187470552 + L1MC4 LINE L1 7835 7851 -191 2408 99 0 0 chr5 12159598 12159901 -187470249 + AluSx SINE Alu 1 303 -9 1203 167 26 106 chr5 12159901 12160110 -187470040 + L1MC4 LINE L1 7851 8028 -14 3156 73 22 44 chr5 12160421 12160875 -187469275 + MLT2A1 LTR ERVL 1 444 0 819 235 105 17 chr5 12160970 12161264 -187468886 + L1ME3 LINE L1 5843 6162 0 1855 195 40 2 chr5 12161922 12162363 -187467787 - MER89 LTR ERV1 0 559 2 518 202 176 8 chr5 12162518 12162637 -187467513 + MER2 DNA MER2_type 206 344 -1 274 161 18 36 chr5 12163610 12163666 -187466484 - MLT1A2 LTR MaLR 0 374 320 1031 139 0 0 chr5 12163681 12163825 -187466325 - MLT1A2 LTR MaLR -227 147 4 1543 158 99 56 chr5 12164040 12164229 -187465921 + MER2 DNA MER2_type 9 219 -126 1850 132 35 17 chr5 12164229 12164517 -187465633 - AluJo SINE Alu -19 293 1 1543 158 99 56 chr5 12164517 12164650 -187465500 + MER2 DNA MER2_type 219 345 0 2021 129 3 7 chr5 12164675 12164962 -187465188 - AluSx SINE Alu -26 286 1 902 192 124 1 chr5 12165204 12165421 -187464729 - MLT1D LTR MaLR -2 503 234 416 127 0 0 chr5 12165421 12165476 -187464674 + AluSg/x SINE Alu 193 247 -62 376 244 37 80 chr5 12165735 12165851 -187464299 + L1MC4 LINE L1 7273 7392 -650 2193 101 0 52 chr5 12165851 12166179 -187463971 + AluSx SINE Alu 1 311 -1 376 244 37 80 chr5 12166179 12166551 -187463599 + L1MC4 LINE L1 7392 7744 -298 1851 170 7 0 chr5 12166647 12166941 -187463209 + AluSx SINE Alu 1 296 -16 204 129 53 53 chr5 12167092 12167263 -187462887 + (TA)n Simple_repeat Simple_repeat 2 172 0 441 99 34 70 chr5 12167372 12167727 -187462423 + (TA)n Simple_repeat Simple_repeat 1 341 0 379 130 81 2 chr5 12167778 12168188 -187461962 + (TA)n Simple_repeat Simple_repeat 1 442 0 294 215 107 50 chr5 12168197 12168318 -187461832 + L1MC4 LINE L1 7910 8037 -5 321 305 48 0 chr5 12168682 12168787 -187461363 - L2 LINE L2 -2 3311 3202 351 224 135 13 chr5 12168862 12169018 -187461132 - Charlie2 DNA MER1_type -17 2845 2671 288 0 0 0 chr5 12169131 12169163 -187460987 + (CA)n Simple_repeat Simple_repeat 1 32 0 379 371 45 0 chr5 12169219 12169397 -187460753 - L1MEd LINE L1 -5482 637 452 2027 121 24 13 chr5 12169689 12169987 -187460163 + AluSx SINE Alu 1 301 -11 745 218 175 26 chr5 12170372 12170680 -187459470 - L1MC4 LINE L1 -5 8037 7684 2340 99 0 0 chr5 12170683 12170976 -187459174 + AluSg1 SINE Alu 1 293 -16 324 0 0 0 chr5 12171155 12171191 -187458959 + (CA)n Simple_repeat Simple_repeat 2 37 0 1574 150 59 28 chr5 12171239 12171361 -187458789 + AluJb SINE Alu 1 118 -194 183 42 0 0 chr5 12171361 12171385 -187458765 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1574 150 59 28 chr5 12171385 12171548 -187458602 + AluJb SINE Alu 118 295 -17 270 268 65 89 chr5 12171725 12171971 -187458179 + MLT1K LTR MaLR 189 428 -160 204 200 0 22 chr5 12172127 12172172 -187457978 + MIR SINE MIR 219 262 0 811 165 0 122 chr5 12172631 12172819 -187457331 + FRAM SINE Alu 1 165 -1 193 93 0 47 chr5 12174029 12174072 -187456078 + (TCTCCC)n Simple_repeat Simple_repeat 3 43 0 30 77 0 0 chr5 12174392 12174457 -187455693 + GC_rich Low_complexity Low_complexity 1 65 0 379 292 99 5 chr5 12175282 12175474 -187454676 - MIR SINE MIR -52 210 1 569 280 101 5 chr5 12175912 12176130 -187454020 - MIR SINE MIR -6 256 18 572 0 15 0 chr5 12176630 12176698 -187453452 + (TTTTA)n Simple_repeat Simple_repeat 2 70 0 2140 117 0 0 chr5 12176700 12176982 -187453168 - AluSx SINE Alu -30 282 1 22 0 0 0 chr5 12176994 12177016 -187453134 + AT_rich Low_complexity Low_complexity 1 22 0 187 226 151 0 chr5 12177378 12177431 -187452719 - MIR3 SINE MIR -21 187 127 21 0 0 0 chr5 12177500 12177521 -187452629 + AT_rich Low_complexity Low_complexity 1 21 0 721 215 58 174 chr5 12178008 12178252 -187451898 - L2 LINE L2 0 3313 3042 635 39 0 0 chr5 12178252 12178330 -187451820 - AluY SINE Alu -11 298 221 721 215 58 174 chr5 12178330 12178672 -187451478 - L2 LINE L2 -271 3042 2709 1179 172 43 0 chr5 12178678 12178885 -187451265 - MER2 DNA MER2_type 0 345 130 3993 132 82 20 chr5 12178885 12179591 -187450559 + Tigger2 DNA MER2_type 1 750 -1968 272 121 176 11 chr5 12179636 12179727 -187450423 + Tigger2 DNA MER2_type 2461 2566 -152 843 167 92 17 chr5 12179779 12179953 -187450197 - Tigger2 DNA MER2_type -2526 192 6 268 163 0 0 chr5 12179953 12180002 -187450148 + MER2 DNA MER2_type 128 176 -169 * 359 112 19 149 chr5 12179983 12180008 -187450142 + Tigger2 DNA MER2_type 2532 2559 -159 2206 92 0 3 chr5 12180008 12180300 -187449850 + AluSx SINE Alu 1 291 -21 359 112 19 149 chr5 12180300 12180381 -187449769 + Tigger2 DNA MER2_type 2559 2624 -94 2510 67 0 3 chr5 12180497 12180794 -187449356 + AluY SINE Alu 2 297 -14 940 95 0 4 chr5 12182115 12182336 -187447814 + AluSg SINE Alu 2 300 -12 2120 134 3 0 chr5 12182397 12182696 -187447454 + AluSx SINE Alu 1 300 -12 373 320 114 7 chr5 12183327 12183599 -187446551 + HAL1 LINE L1 1463 1763 -744 808 224 150 72 chr5 12183834 12184348 -187445802 + L1ME3 LINE L1 4820 5368 -797 431 309 0 0 chr5 12184349 12184459 -187445691 - MER8 DNA MER2_type -127 112 3 2434 238 111 12 chr5 12184459 12185182 -187444968 + L1ME3 LINE L1 5367 6160 -2 23 33 0 0 chr5 12186510 12186540 -187443610 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr5 12186684 12186705 -187443445 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 12186978 12186999 -187443151 + AT_rich Low_complexity Low_complexity 1 21 0 2415 97 0 0 chr5 12187142 12187451 -187442699 - AluSx SINE Alu -3 309 1 1751 175 34 3 chr5 12187518 12187810 -187442340 - AluSx SINE Alu -11 301 1 1264 216 163 25 chr5 12188299 12188697 -187441453 - MLT1H LTR MaLR 0 549 97 2188 109 7 3 chr5 12189256 12189550 -187440600 - AluSx SINE Alu -17 295 1 1820 174 3 3 chr5 12190974 12191279 -187438871 - AluJo SINE Alu -7 305 1 270 0 0 0 chr5 12191283 12191313 -187438837 + (T)n Simple_repeat Simple_repeat 1 30 0 210 224 0 0 chr5 12191486 12191535 -187438615 + GA-rich Low_complexity Low_complexity 3 51 0 2357 54 7 0 chr5 12191808 12192103 -187438047 - AluY SINE Alu -14 297 1 1955 108 0 0 chr5 12192367 12192617 -187437533 + AluSx SINE Alu 49 298 -14 232 295 214 63 chr5 12192729 12192912 -187437238 - L2 LINE L2 -17 3296 3142 1646 165 7 65 chr5 12192912 12193221 -187436929 - AluJb SINE Alu -21 291 1 232 295 214 63 chr5 12193221 12193369 -187436781 - L2 LINE L2 -171 3142 2915 * 261 303 290 24 chr5 12193365 12193662 -187436488 + L2 LINE L2 2569 2944 -370 27 0 0 0 chr5 12193865 12193892 -187436258 + AT_rich Low_complexity Low_complexity 1 27 0 2481 67 0 0 chr5 12194646 12194945 -187435205 - AluY SINE Alu -12 299 1 23 54 0 0 chr5 12195108 12195145 -187435005 + AT_rich Low_complexity Low_complexity 1 37 0 470 261 154 0 chr5 12195470 12195658 -187434492 - MLT1L LTR MaLR -8 607 391 310 252 55 88 chr5 12195928 12196166 -187433984 - L2 LINE L2 0 3313 3084 375 237 38 23 chr5 12199063 12199194 -187430956 + Charlie7 DNA MER1_type 2477 2609 -3 272 255 54 82 chr5 12199407 12199795 -187430355 - L1MC5 LINE L1 -272 7689 7313 546 268 83 20 chr5 12200265 12200519 -187429631 - L1MC4 LINE L1 -981 7061 6792 2001 126 29 0 chr5 12203824 12204156 -187425994 - AluSx SINE Alu 0 340 1 346 333 63 0 chr5 12204250 12204361 -187425789 - L2 LINE L2 -2 3270 3153 282 377 31 13 chr5 12204766 12204925 -187425225 - MIR3 SINE MIR -5 203 42 1864 164 60 0 chr5 12205705 12206023 -187424127 + MER1B DNA MER1_type 1 337 0 1930 140 0 0 chr5 12206174 12206452 -187423698 - AluSg SINE Alu -8 302 25 40 21 0 0 chr5 12207128 12207175 -187422975 + AT_rich Low_complexity Low_complexity 1 47 0 2277 79 0 33 chr5 12207460 12207763 -187422387 + AluSp SINE Alu 1 293 -20 1924 173 0 0 chr5 12208781 12209081 -187421069 - AluJb SINE Alu -12 300 1 21 0 0 0 chr5 12209219 12209240 -187420910 + AT_rich Low_complexity Low_complexity 1 21 0 856 154 0 0 chr5 12209240 12209363 -187420787 - FLAM_C SINE Alu -20 123 1 1318 277 76 9 chr5 12209521 12210110 -187420040 - L2 LINE L2 -204 3109 2471 645 257 59 10 chr5 12210118 12210320 -187419830 - L2 LINE L2 -1338 1976 1765 309 254 83 55 chr5 12212023 12212204 -187417946 - MIR SINE MIR -6 256 71 225 229 115 21 chr5 12212352 12212448 -187417702 + MIR SINE MIR 90 194 -68 209 311 134 34 chr5 12212446 12212565 -187417585 - L2 LINE L2 -1 3312 3182 * 1715 171 10 10 chr5 12212820 12213112 -187417038 - AluJo SINE Alu -20 292 1 2161 130 37 6 chr5 12213779 12214132 -187416018 - THE1B LTR MaLR 0 364 1 917 200 15 15 chr5 12214132 12214337 -187415813 - MER3 DNA MER1_type -4 205 1 646 180 0 0 chr5 12214805 12214905 -187415245 - FRAM SINE Alu -32 144 45 754 182 0 23 chr5 12216132 12216264 -187413886 + FLAM_C SINE Alu 1 129 -14 275 244 64 13 chr5 12217034 12217112 -187413038 - MER3 DNA MER1_type -127 82 1 317 221 143 0 chr5 12217335 12217412 -187412738 - MER2 DNA MER2_type -257 88 1 1398 171 114 7 chr5 12217707 12217987 -187412163 + AluJo SINE Alu 1 310 -2 27 0 0 0 chr5 12217989 12218016 -187412134 + AT_rich Low_complexity Low_complexity 1 27 0 1927 149 0 7 chr5 12218338 12218639 -187411511 + AluJb SINE Alu 1 299 -13 1291 135 18 135 chr5 12219371 12219770 -187410380 + Tigger5 DNA MER2_type 11 2322 -1 422 262 6 90 chr5 12219770 12220004 -187410146 + L1MC4 LINE L1 7040 7252 -735 1096 243 83 98 chr5 12220006 12220587 -187409563 - MLT1G LTR MaLR -3 587 16 349 350 33 22 chr5 12220596 12220776 -187409374 + L1MC4a LINE L1 7169 7350 -458 2495 183 33 9 chr5 12220786 12221328 -187408822 + MER90 LTR ERV1 1 596 -18 292 310 139 12 chr5 12221375 12221680 -187408470 + L1MC4a LINE L1 5576 5793 -328 208 375 79 29 chr5 12225425 12225841 -187404309 + L2 LINE L2 2320 2756 -558 1295 194 24 8 chr5 12226294 12226546 -187403604 + AluJo SINE Alu 39 294 -18 2262 108 0 13 chr5 12226794 12227109 -187403041 - AluSx SINE Alu 0 312 2 266 358 75 11 chr5 12227388 12227575 -187402575 - MIR SINE MIR -40 222 24 351 299 76 28 chr5 12227834 12227864 -187402286 - MIR3 SINE MIR -33 175 148 2123 115 0 20 chr5 12227864 12228169 -187401981 - AluSx SINE Alu -13 299 1 351 299 76 28 chr5 12228169 12228282 -187401868 - MIR3 SINE MIR -60 148 25 470 273 123 0 chr5 12228574 12228755 -187401395 - L2 LINE L2 -747 2567 2363 2424 88 0 25 chr5 12228755 12229072 -187401078 - AluSc SINE Alu 0 309 1 342 91 0 0 chr5 12230087 12230142 -187400008 + (TG)n Simple_repeat Simple_repeat 1 55 0 2089 110 45 0 chr5 12231370 12231660 -187398490 - AluSx SINE Alu -9 303 1 24 32 0 0 chr5 12232826 12232857 -187397293 + AT_rich Low_complexity Low_complexity 1 31 0 315 0 0 0 chr5 12234092 12234127 -187396023 + (TA)n Simple_repeat Simple_repeat 2 36 0 2176 110 0 25 chr5 12234127 12234445 -187395705 - AluSx SINE Alu -2 310 1 216 0 0 0 chr5 12234470 12234494 -187395656 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 26 64 0 0 chr5 12234901 12234948 -187395202 + AT_rich Low_complexity Low_complexity 1 47 0 1370 205 115 18 chr5 12237570 12238023 -187392127 + L1M4 LINE L1 4802 5298 -848 484 275 178 51 chr5 12238048 12238660 -187391490 + L2 LINE L2 2625 3311 -2 316 311 151 50 chr5 12238922 12239073 -187391077 - L1MC/D LINE L1 -2108 5700 5515 1721 88 102 56 chr5 12239073 12239358 -187390792 - AluSg SINE Alu -10 300 3 316 311 151 50 chr5 12239358 12239444 -187390706 - L1MC/D LINE L1 -2293 5515 5439 2015 151 0 0 chr5 12441496 12441803 -187188347 - AluSx SINE Alu 0 307 1 2022 148 0 10 chr5 12441976 12442281 -187187869 + AluJb SINE Alu 1 302 -10 444 292 0 15 chr5 12442630 12442760 -187187390 - MIR SINE MIR -127 135 8 1551 175 32 3 chr5 12442945 12443255 -187186895 - MER90 LTR ERV1 -254 360 1 263 345 36 24 chr5 12443265 12443433 -187186717 - L1MC4 LINE L1 -612 7430 7261 1146 242 81 98 chr5 12443454 12444036 -187186114 + MLT1G LTR MaLR 16 587 -3 437 262 6 98 chr5 12444038 12444274 -187185876 - L1MC4 LINE L1 -733 7228 7040 1305 134 20 136 chr5 12444274 12444673 -187185477 - Tigger5 DNA MER2_type -1 2322 11 429 223 45 36 chr5 12445300 12445412 -187184738 + MER81 DNA DNA 2 114 0 299 227 134 10 chr5 12445875 12445972 -187184178 + MLT1C LTR MaLR 5 113 -354 2193 113 0 0 chr5 12445989 12446272 -187183878 - AluSx SINE Alu -29 283 1 637 129 0 11 chr5 12446344 12446437 -187183713 - AluS SINE Alu -221 92 1 1067 214 58 90 chr5 12446437 12446815 -187183335 + MLT1C LTR MaLR 102 467 0 508 112 31 0 chr5 12447274 12447372 -187182778 + CT-rich Low_complexity Low_complexity 2 102 0 267 187 13 27 chr5 12448006 12448081 -187182069 - MLT1K LTR MaLR -323 265 192 408 40 0 0 chr5 12448441 12448491 -187181659 + (GA)n Simple_repeat Simple_repeat 2 51 0 * 558 0 0 0 chr5 12448490 12448552 -187181598 + (TG)n Simple_repeat Simple_repeat 2 63 0 1184 210 102 46 chr5 12448606 12448818 -187181332 + L1MD3 LINE L1 7459 7658 -384 2441 104 0 0 chr5 12448818 12449127 -187181023 + AluSx SINE Alu 1 309 -3 1184 210 102 46 chr5 12449127 12449142 -187181008 + L1MD3 LINE L1 7658 7671 -371 3510 191 10 2 chr5 12449142 12449740 -187180410 - MER77 LTR ERV1 -2 603 1 1184 210 102 46 chr5 12449740 12450005 -187180145 + L1MD3 LINE L1 7671 8041 -1 2396 80 23 0 chr5 12450025 12450324 -187179826 + AluSx SINE Alu 1 306 -6 183 242 0 65 chr5 12450548 12450610 -187179540 + MIR SINE MIR 96 153 -109 441 256 70 58 chr5 12450851 12451007 -187179143 + L2 LINE L2 3154 3311 -2 2088 146 0 7 chr5 12451190 12451367 -187178783 - AluSx SINE Alu -6 306 130 189 74 0 0 chr5 12451367 12451394 -187178756 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2088 146 0 7 chr5 12451394 12451524 -187178626 - AluSx SINE Alu -182 130 1 1543 201 120 21 chr5 12451918 12452336 -187177814 + MLT1C LTR MaLR 1 459 -8 266 115 19 0 chr5 12452338 12452390 -187177760 + (TATAA)n Simple_repeat Simple_repeat 1 53 0 450 280 91 32 chr5 12452512 12452861 -187177289 + L1ME3A LINE L1 5127 5476 -690 2304 234 57 39 chr5 12452902 12453496 -187176654 + MER77 LTR ERV1 1 605 0 1557 189 70 22 chr5 12453954 12454324 -187175826 + MLT1B LTR MaLR 1 388 -2 224 263 70 0 chr5 12456091 12456148 -187174002 - L2 LINE L2 -12 3260 3200 479 303 19 19 chr5 12456169 12456324 -187173826 + MIR SINE MIR 90 244 -18 244 280 167 7 chr5 12456336 12456486 -187173664 - MIR SINE MIR -73 189 16 298 238 83 72 chr5 12456597 12456611 -187173539 + MER112 DNA MER1_type 1 13 -247 1747 167 0 67 chr5 12456611 12456940 -187173210 - AluJo SINE Alu -5 307 1 298 238 83 72 chr5 12456940 12457087 -187173063 + MER112 DNA MER1_type 13 157 -103 387 0 0 0 chr5 12457087 12457130 -187173020 + (TG)n Simple_repeat Simple_repeat 2 44 0 1443 180 67 0 chr5 12457130 12457397 -187172753 - AluJb SINE Alu -27 285 1 298 238 83 72 chr5 12457397 12457426 -187172724 + MER112 DNA MER1_type 156 195 -65 389 280 122 62 chr5 12458004 12458358 -187171792 + MLT1J2 LTR MaLR 31 405 -45 1449 224 80 23 chr5 12458473 12458910 -187171240 + MLT1C LTR MaLR 6 467 0 2195 118 3 0 chr5 12459121 12459409 -187170741 - AluSx SINE Alu -18 294 6 2152 98 3 18 chr5 12459791 12460123 -187170027 - AluSx SINE Alu 0 328 1 1115 216 16 0 chr5 12460183 12460428 -187169722 - MLT1C LTR MaLR -6 461 213 1883 149 0 17 chr5 12460429 12460738 -187169412 - AluSx SINE Alu 0 304 1 1404 262 32 46 chr5 12460755 12461278 -187168872 + L1ME3A LINE L1 5595 6110 -60 2197 95 0 63 chr5 12461397 12461714 -187168436 + AluSx SINE Alu 1 297 -15 1253 114 0 0 chr5 12461719 12461885 -187168265 + AluSq SINE Alu 139 304 -9 222 121 0 0 chr5 12461922 12461955 -187168195 + MIR SINE MIR 218 250 -12 321 230 50 20 chr5 12462071 12462171 -187167979 + L1ME3A LINE L1 6060 6162 -8 279 325 68 0 chr5 12462183 12462300 -187167850 + MIR SINE MIR 137 261 -1 2751 161 66 19 chr5 12462406 12462892 -187167258 - LTR22 LTR ERVK 0 509 1 506 220 57 38 chr5 12462932 12463091 -187167059 - MER46C DNA MER2_type -174 164 3 335 233 58 0 chr5 12463466 12463552 -187166598 + MER53 DNA DNA 5 95 -94 * 346 198 278 8 chr5 12463478 12463604 -187166546 - MER53 DNA DNA -7 182 23 2092 171 34 8 chr5 12463668 12464048 -187166102 + MLT1B LTR MaLR 1 390 0 1921 145 21 0 chr5 12464702 12464985 -187165165 - AluSx SINE Alu -23 289 1 654 237 19 0 chr5 12465095 12465251 -187164899 - MER20 DNA MER1_type -14 205 47 276 160 40 0 chr5 12466227 12466277 -187163873 - MER5B DNA MER1_type -126 52 1 266 256 73 0 chr5 12466292 12466374 -187163776 + MER5B DNA MER1_type 58 145 -33 183 265 255 20 chr5 12466402 12466500 -187163650 - MER5A DNA MER1_type -2 187 67 341 203 35 7 chr5 12466542 12466621 -187163529 + MER5A DNA MER1_type 13 109 -80 193 291 78 48 chr5 12466663 12466766 -187163384 - MIR3 SINE MIR -39 169 64 376 311 59 35 chr5 12467368 12467492 -187162658 - MARNA DNA Mariner -242 344 224 1954 132 7 26 chr5 12467492 12467795 -187162355 - AluJb SINE Alu -15 297 1 376 311 59 35 chr5 12467795 12467924 -187162226 - MARNA DNA Mariner -362 224 85 429 76 38 13 chr5 12468019 12468098 -187162052 + CT-rich Low_complexity Low_complexity 2 82 0 1840 219 35 20 chr5 12468701 12469157 -187160993 - MLT1C LTR MaLR -2 465 3 2100 121 0 0 chr5 12469219 12469528 -187160622 - AluSx SINE Alu 0 313 5 2403 84 0 10 chr5 12469635 12469984 -187160166 - AluSq SINE Alu 0 313 1 405 198 57 38 chr5 12470592 12470749 -187159401 - MLT1D LTR MaLR -16 451 292 583 180 55 0 chr5 12470841 12470969 -187159181 - MLT1D LTR MaLR -366 139 5 324 212 0 115 chr5 12471380 12471493 -187158657 + MER5A DNA MER1_type 10 109 -80 344 291 62 34 chr5 12472042 12472221 -187157929 + MLT1K LTR MaLR 145 328 -260 232 268 28 0 chr5 12472489 12472560 -187157590 + MLT1K LTR MaLR 509 581 -7 1939 156 0 3 chr5 12472839 12473127 -187157023 - AluJb SINE Alu -25 287 1 361 118 36 154 chr5 12473127 12473237 -187156913 - AluJo SINE Alu -167 135 39 418 301 75 7 chr5 12473503 12473649 -187156501 + MIR SINE MIR 107 262 0 362 211 65 49 chr5 12474415 12474601 -187155549 - MLT1C LTR MaLR -203 187 6 2273 92 17 0 chr5 12475047 12475340 -187154810 - AluSx SINE Alu -14 298 1 1095 257 36 23 chr5 12475345 12475648 -187154502 + LTR40a LTR ERVL 65 371 -148 607 118 11 0 chr5 12475648 12475741 -187154409 + MER74A LTR ERVL 1 94 -464 2055 133 0 7 chr5 12475849 12476179 -187153971 - AluSx SINE Alu 0 328 1 2351 110 0 0 chr5 12476183 12476492 -187153658 - AluSx SINE Alu -3 309 1 1859 98 0 4 chr5 12476989 12477224 -187152926 - AluSq SINE Alu -79 234 1 270 257 27 14 chr5 12477693 12477767 -187152383 + MER68 LTR ERV1 224 298 -264 298 272 48 20 chr5 12477844 12477991 -187152159 + MER77 LTR ERV1 427 577 -28 2204 120 7 0 chr5 12478539 12478847 -187151303 - AluSx SINE Alu -2 310 1 489 93 67 0 chr5 12478960 12479035 -187151115 + MADE1 DNA Mariner 1 80 0 918 124 0 0 chr5 12479131 12479260 -187150890 + FLAM_C SINE Alu 14 142 -1 1244 172 57 0 chr5 12479268 12479512 -187150638 + L1M4 LINE L1 4668 4925 -1221 406 214 95 77 chr5 12479665 12479833 -187150317 - L1M4 LINE L1 -2865 3281 3111 306 277 92 0 chr5 12479841 12479971 -187150179 - L1M4 LINE L1 -3136 3010 2869 1932 130 60 41 chr5 12480504 12480872 -187149278 + THE1C LTR MaLR 1 375 0 2359 97 0 0 chr5 12480903 12481203 -187148947 - AluY SINE Alu -11 300 1 340 215 158 51 chr5 12481962 12482120 -187148030 - MER5A DNA MER1_type -6 183 9 761 196 27 71 chr5 12482135 12482201 -187147949 - MER5B DNA MER1_type 0 178 111 2627 75 0 0 chr5 12482201 12482509 -187147641 + AluSq SINE Alu 1 308 -5 761 196 27 71 chr5 12482509 12482626 -187147524 - MER5B DNA MER1_type -67 111 3 2112 107 4 0 chr5 12482888 12483195 -187146955 + AluSx SINE Alu 1 308 0 2006 159 3 7 chr5 12483531 12483840 -187146310 + AluJo SINE Alu 1 308 -4 558 285 35 0 chr5 12483860 12484032 -187146118 + MLT1H LTR MaLR 165 342 -207 2359 115 0 0 chr5 12484213 12484525 -187145625 + AluSx SINE Alu 1 312 0 261 0 0 0 chr5 12484763 12484792 -187145358 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 1900 131 4 0 chr5 12484800 12485075 -187145075 - AluJb SINE Alu -36 276 1 25 0 0 0 chr5 12485326 12485351 -187144799 + AT_rich Low_complexity Low_complexity 1 25 0 677 223 16 77 chr5 12486103 12486350 -187143800 + MARNA DNA Mariner 184 415 -171 227 191 0 43 chr5 12487051 12487098 -187143052 - L2 LINE L2 0 3272 3228 2720 30 3 0 chr5 12487313 12487617 -187142533 - AluY SINE Alu -6 305 1 2184 119 86 6 chr5 12488037 12488374 -187141776 + THE1B LTR MaLR 1 364 0 297 155 0 0 chr5 12488500 12488558 -187141592 + (CA)n Simple_repeat Simple_repeat 1 58 0 705 268 84 9 chr5 12488910 12489123 -187141027 - MIR SINE MIR -19 243 15 462 200 30 0 chr5 12489207 12489307 -187140843 - MLT1G LTR MaLR -6 584 482 372 310 48 16 chr5 12489566 12489753 -187140397 - MLT1G1 LTR MaLR -398 197 5 1962 89 4 0 chr5 12490082 12490330 -187139820 + AluSp SINE Alu 54 302 -11 2052 86 25 4 chr5 12491013 12491319 -187138831 + AluSx SINE Alu 1 312 0 409 246 0 79 chr5 12491414 12491540 -187138610 + MIR SINE MIR 115 230 -32 31 26 0 0 chr5 12492068 12492106 -187138044 + AT_rich Low_complexity Low_complexity 1 38 0 2157 120 0 31 chr5 12492115 12492432 -187137718 - AluSg SINE Alu -3 307 1 2761 231 69 83 chr5 12492438 12492521 -187137629 - L1MC4 LINE L1 -1 8041 7958 2264 121 0 3 chr5 12492521 12492826 -187137324 - AluSx SINE Alu -8 304 1 2761 231 69 83 chr5 12492826 12493428 -187136722 - L1MC4 LINE L1 -84 7958 7378 2277 108 0 14 chr5 12493428 12493724 -187136426 - AluSq SINE Alu -21 292 1 2761 231 69 83 chr5 12493724 12494236 -187135914 - L1MC4 LINE L1 -664 7378 6860 754 205 42 6 chr5 12494595 12494761 -187135389 + MER20 DNA MER1_type 34 205 -14 2307 100 0 10 chr5 12494849 12495159 -187134991 + AluSx SINE Alu 1 307 -5 773 218 41 0 chr5 12495844 12496014 -187134136 - MER45A DNA AcHobo -1 177 1 2453 124 28 5 chr5 12496187 12496575 -187133575 - MLT2C1 LTR ERVL 0 397 1 256 209 353 14 chr5 12497667 12497806 -187132344 - MER5A DNA MER1_type -3 186 1 877 196 41 0 chr5 12498121 12498340 -187131810 + L1MB7 LINE L1 5955 6182 -2 1913 166 0 10 chr5 12498967 12499269 -187130881 - AluJb SINE Alu -13 299 1 564 188 0 60 chr5 12499877 12499994 -187130156 + MER81 DNA DNA 2 111 -3 2165 106 24 3 chr5 12500726 12501019 -187129131 + AluSq SINE Alu 1 299 -14 215 103 29 73 chr5 12501020 12501088 -187129062 + GA-rich Low_complexity Low_complexity 1 65 0 251 145 97 16 chr5 12501262 12501324 -187128826 + GA-rich Low_complexity Low_complexity 1 67 0 226 274 84 106 chr5 12501715 12501894 -187128256 - MIR SINE MIR -14 248 74 307 235 0 0 chr5 12501984 12502052 -187128098 - MER5A DNA MER1_type -106 83 16 497 254 188 0 chr5 12502207 12502376 -187127774 - L1MD2 LINE L1 -9 6350 6128 180 0 0 0 chr5 12502376 12502396 -187127754 + (TG)n Simple_repeat Simple_repeat 2 21 0 497 254 188 0 chr5 12502396 12502450 -187127700 - L1MD2 LINE L1 -231 6128 6085 * 611 297 61 0 chr5 12502446 12502658 -187127492 - L1MD1 LINE L1 -159 6083 5859 2362 74 7 10 chr5 12502936 12503232 -187126918 - AluSc SINE Alu -14 295 1 2076 147 6 16 chr5 12503813 12504127 -187126023 - AluJo SINE Alu -1 311 1 243 0 0 0 chr5 12504942 12504969 -187125181 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2285 85 3 3 chr5 12504970 12505280 -187124870 - AluSq SINE Alu 0 310 1 273 146 0 0 chr5 12505881 12505929 -187124221 + (CA)n Simple_repeat Simple_repeat 1 48 0 2120 89 55 27 chr5 12506635 12506928 -187123222 + AluSx SINE Alu 1 301 -11 1500 281 62 19 chr5 12507411 12507965 -187122185 + L1ME3A LINE L1 5583 6159 -11 188 35 35 0 chr5 12507965 12507994 -187122156 + (TTTG)n Simple_repeat Simple_repeat 4 33 0 412 119 0 0 chr5 12508000 12508059 -187122091 - AluJ/FLAM SINE Alu -252 60 2 224 370 37 9 chr5 12508119 12508227 -187121923 + MIR SINE MIR 152 262 0 2164 123 0 3 chr5 12508706 12508999 -187121151 + AluSq SINE Alu 1 292 -21 648 255 0 25 chr5 12509093 12509254 -187120896 + MIR SINE MIR 98 254 -8 2356 94 3 3 chr5 12509970 12510269 -187119881 + AluSq SINE Alu 1 299 -14 943 234 75 34 chr5 12510273 12510538 -187119612 + MLT1C LTR MaLR 192 467 0 367 341 0 0 chr5 12510659 12510838 -187119312 + (CA)n Simple_repeat Simple_repeat 2 180 0 294 366 0 0 chr5 12510895 12511070 -187119080 + (CA)n Simple_repeat Simple_repeat 2 176 0 343 352 0 0 chr5 12511105 12511284 -187118866 + (CA)n Simple_repeat Simple_repeat 2 180 0 * 346 291 0 53 chr5 12511236 12511425 -187118725 + (CACG)n Simple_repeat Simple_repeat 1 179 0 263 378 9 0 chr5 12511488 12511682 -187118468 - L1P3 LINE L1 -302 5819 5625 656 226 55 6 chr5 12511688 12511852 -187118298 - L1MA10 LINE L1 0 6334 6163 774 188 0 0 chr5 12511860 12511993 -187118157 - FLAM_A SINE Alu 0 133 1 1621 143 4 24 chr5 12512527 12512779 -187117371 - AluJo SINE Alu -38 274 28 1078 189 50 36 chr5 12512930 12513231 -187116919 - LTR37A LTR ERV1 0 426 122 1556 214 33 82 chr5 12513237 12513723 -187116427 + MLT1C LTR MaLR 6 467 0 188 363 29 29 chr5 12514104 12514206 -187115944 - L2 LINE L2 -2 3311 3210 2492 81 0 0 chr5 12514387 12514683 -187115467 - AluSg SINE Alu -14 296 1 223 89 0 44 chr5 12515822 12515867 -187114283 + (TTTC)n Simple_repeat Simple_repeat 4 46 0 282 98 18 6 chr5 12515867 12515921 -187114229 - AluJo SINE Alu -263 37 1 1960 138 0 7 chr5 12516704 12516980 -187113170 - AluSx SINE Alu -8 304 31 1628 148 104 4 chr5 12517307 12517577 -187112573 - AluJb SINE Alu -15 297 1 2478 61 0 22 chr5 12517694 12518027 -187112123 - AluY SINE Alu 0 311 1 21 0 0 0 chr5 12518096 12518117 -187112033 + AT_rich Low_complexity Low_complexity 1 21 0 23 101 0 0 chr5 12519957 12520036 -187110114 + GC_rich Low_complexity Low_complexity 1 79 0 24 0 0 0 chr5 12520218 12520242 -187109908 + GC_rich Low_complexity Low_complexity 1 24 0 40 0 0 0 chr5 12520425 12520465 -187109685 + GC_rich Low_complexity Low_complexity 1 40 0 264 59 0 0 chr5 12521625 12521659 -187108491 + (GAAAA)n Simple_repeat Simple_repeat 5 38 0 687 52 155 0 chr5 12522042 12522139 -187108011 - THE1C LTR MaLR -263 112 1 387 248 73 0 chr5 12522776 12522885 -187107265 + MIR SINE MIR 111 227 -35 204 40 0 0 chr5 12522957 12522982 -187107168 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2063 117 3 3 chr5 12524542 12524833 -187105317 - AluSx SINE Alu -21 291 1 675 35 0 0 chr5 12525676 12525762 -187104388 + (GA)n Simple_repeat Simple_repeat 2 87 0 935 141 7 0 chr5 12525762 12525904 -187104246 - AluSg/x SINE Alu -41 271 129 886 189 0 0 chr5 12525922 12526065 -187104085 - FLAM_C SINE Alu 0 143 1 2361 107 0 0 chr5 12526861 12527159 -187102991 - AluSx SINE Alu -14 298 1 441 318 28 11 chr5 12527223 12527399 -187102751 + MLT1L LTR MaLR 433 611 -4 1185 140 151 65 chr5 12528000 12528304 -187101846 + AluJo SINE Alu 1 302 0 451 298 23 8 chr5 12528908 12529039 -187101111 - LTR67 LTR ERVL -1 556 424 180 0 0 0 chr5 12529069 12529089 -187101061 + (A)n Simple_repeat Simple_repeat 1 20 0 2449 227 48 5 chr5 12529103 12529689 -187100461 - L1MC3 LINE L1 -25 7760 7150 763 159 0 43 chr5 12530122 12530260 -187099890 + FLAM_C SINE Alu 1 132 -1 2197 109 0 61 chr5 12530319 12530648 -187099502 - AluSx SINE Alu -3 309 1 1454 189 115 9 chr5 12530905 12531243 -187098907 + MLT1A2 LTR MaLR 1 374 0 271 208 0 57 chr5 12532683 12532789 -187097361 + (CTCA)n Simple_repeat Simple_repeat 4 103 0 183 146 0 0 chr5 12534208 12534249 -187095901 + (A)n Simple_repeat Simple_repeat 1 41 0 513 289 18 36 chr5 12534374 12534540 -187095610 + L1ME1 LINE L1 5953 6115 -51 330 250 7 46 chr5 12534553 12534705 -187095445 + (TTATA)n Simple_repeat Simple_repeat 3 148 0 1999 121 3 35 chr5 12534764 12535079 -187095071 + AluSx SINE Alu 1 305 -7 2110 132 3 10 chr5 12535091 12535387 -187094763 + AluJo SINE Alu 5 298 -14 216 0 0 0 chr5 12536031 12536055 -187094095 + (CAAAAA)n Simple_repeat Simple_repeat 1 24 0 2327 81 14 0 chr5 12536607 12536903 -187093247 - AluSc SINE Alu -9 300 1 985 139 7 0 chr5 12536903 12537047 -187093103 - FRAM SINE Alu -14 162 18 231 248 9 55 chr5 12537573 12537682 -187092468 + G-rich Low_complexity Low_complexity 2 105 0 1714 234 64 2 chr5 12537855 12538295 -187091855 - MLT1C LTR MaLR 0 467 1 2222 111 0 3 chr5 12538732 12539021 -187091129 - AluSx SINE Alu -24 288 1 341 231 64 22 chr5 12539253 12539408 -187090742 - MER63 DNA MER1_type -2 1686 675 439 256 48 0 chr5 12539439 12539564 -187090586 - MIR SINE MIR -92 170 40 337 307 68 0 chr5 12539599 12539762 -187090388 - L1ME4a LINE L1 -224 5897 5724 413 249 6 0 chr5 12540092 12540269 -187089881 + (CA)n Simple_repeat Simple_repeat 1 178 0 2200 182 42 7 chr5 12540547 12540817 -187089333 - MLT1C LTR MaLR -16 451 192 6210 84 9 15 chr5 12540817 12541199 -187088951 + L1PA10 LINE L1 5106 5489 -679 2394 93 0 3 chr5 12541199 12541499 -187088651 + AluSp SINE Alu 1 299 -14 6210 84 9 15 chr5 12541499 12542170 -187087980 + L1PA10 LINE L1 5489 6155 -13 198 0 0 0 chr5 12542170 12542192 -187087958 + (TTAAA)n Simple_repeat Simple_repeat 4 25 0 6210 84 9 15 chr5 12542192 12542203 -187087947 + L1PA10 LINE L1 6155 6165 -3 2200 182 42 7 chr5 12542203 12542365 -187087785 - MLT1C LTR MaLR -275 192 4 189 0 0 0 chr5 12542533 12542554 -187087596 + (T)n Simple_repeat Simple_repeat 1 21 0 719 202 56 17 chr5 12542948 12543233 -187086917 + MER74A LTR ERVL 170 558 0 863 137 27 0 chr5 12543236 12543382 -187086768 + LTR40a LTR ERVL 370 519 0 471 196 0 28 chr5 12543673 12543780 -187086370 - MER5A DNA MER1_type -84 105 2 225 229 0 0 chr5 12544116 12544164 -187085986 + L2 LINE L2 3224 3271 -1 2302 89 14 0 chr5 12544378 12544669 -187085481 + AluSp SINE Alu 1 295 -18 245 295 64 27 chr5 12545085 12545200 -187084950 + MIR SINE MIR 40 157 -75 1290 202 77 62 chr5 12545645 12546100 -187084050 + MLT1C LTR MaLR 6 467 0 2204 138 0 0 chr5 12546477 12546774 -187083376 - AluSx SINE Alu -15 297 1 216 289 62 99 chr5 12546939 12547150 -187083000 + MIR SINE MIR 55 257 -5 1317 190 40 0 chr5 12547210 12547484 -187082666 + MER58B DNA MER1_type 57 341 0 414 295 138 9 chr5 12547484 12547694 -187082456 + MIR SINE MIR 26 262 0 619 270 81 43 chr5 12548260 12548630 -187081520 + MLT1J2 LTR MaLR 59 442 -8 351 269 107 54 chr5 12548630 12548779 -187081371 - MIR3 SINE MIR -40 168 12 35 0 0 0 chr5 12548785 12548820 -187081330 + AT_rich Low_complexity Low_complexity 1 35 0 1284 260 68 41 chr5 12548958 12549373 -187080777 - LTR41 LTR ERVL -6 767 342 1243 290 91 24 chr5 12549651 12550203 -187079947 - MLT1E LTR MaLR 0 593 5 2110 144 3 3 chr5 12550241 12550553 -187079597 - AluSx SINE Alu 0 312 1 1342 229 53 51 chr5 12550798 12551231 -187078919 - MLT1C LTR MaLR 0 467 34 298 238 33 90 chr5 12551542 12551664 -187078486 + MIR SINE MIR 81 195 -67 462 86 14 20 chr5 12551667 12551752 -187078398 + MLT1E1 LTR MaLR 1 81 -512 383 304 26 41 chr5 12551869 12552063 -187078087 - MLT1K LTR MaLR -244 344 154 743 316 94 2 chr5 12552512 12552927 -187077223 + LTR33 LTR ERVL 37 489 -32 2038 142 0 31 chr5 12552978 12553295 -187076855 + AluSx SINE Alu 4 310 -2 1771 164 3 40 chr5 12554920 12555224 -187074926 - AluJo SINE Alu -14 298 6 2458 73 13 0 chr5 12555249 12555549 -187074601 - AluY SINE Alu -7 304 1 2753 134 11 17 chr5 12556620 12557083 -187073067 + MER4C LTR ERV1 3 462 -3 1679 196 19 11 chr5 12557286 12557659 -187072491 + MLT1B LTR MaLR 15 390 0 2047 101 56 10 chr5 12558567 12558855 -187071295 - AluSq SINE Alu -12 301 1 2550 62 3 3 chr5 12558881 12559189 -187070961 - AluY SINE Alu -3 308 1 422 273 86 16 chr5 12560579 12560766 -187069384 + L2 LINE L2 3094 3293 -20 1968 125 25 7 chr5 12561494 12561811 -187068339 - AluSq SINE Alu 0 322 1 3379 173 75 78 chr5 12562126 12562990 -187067160 + MER21B LTR ERV1 1 862 -1 544 297 146 47 chr5 12564522 12565298 -187064852 - L2 LINE L2 -40 3273 2428 211 274 183 21 chr5 12566060 12566246 -187063904 - L2 LINE L2 -1163 2151 1936 311 258 106 46 chr5 12566274 12566425 -187063725 - MER63A DNA MER1_type 0 210 51 2376 101 0 3 chr5 12567915 12568221 -187061929 - AluSq SINE Alu -8 305 1 204 297 121 0 chr5 12569544 12569635 -187060515 + MIR SINE MIR 99 200 -62 1777 174 16 7 chr5 12570003 12570307 -187059843 + AluJo SINE Alu 1 307 -5 493 254 8 8 chr5 12570506 12570624 -187059526 + L2 LINE L2 3193 3310 -3 2258 101 0 3 chr5 12571790 12572086 -187058064 + AluSx SINE Alu 1 295 -17 447 52 0 0 chr5 12572087 12572145 -187058005 + (CA)n Simple_repeat Simple_repeat 2 59 0 1911 118 54 25 chr5 12572149 12572429 -187057721 + AluSx SINE Alu 1 288 -24 401 75 0 15 chr5 12572432 12572499 -187057651 + (TAGA)n Simple_repeat Simple_repeat 4 69 0 2382 76 9 22 chr5 12573625 12573941 -187056209 + AluSp SINE Alu 1 312 -1 2078 135 10 0 chr5 12574895 12575191 -187054959 - AluSx SINE Alu -13 299 1 335 296 171 19 chr5 12576257 12576473 -187053677 + MIR SINE MIR 14 262 0 2026 148 0 22 chr5 12576516 12576833 -187053317 - AluJb SINE Alu -2 310 1 519 225 59 59 chr5 12577724 12577755 -187052395 + MER20 DNA MER1_type 33 63 -156 2053 125 3 10 chr5 12577755 12578051 -187052099 - AluSx SINE Alu -18 294 1 519 225 59 59 chr5 12578051 12578206 -187051944 + MER20 DNA MER1_type 62 219 0 1882 176 10 0 chr5 12578478 12578784 -187051366 - AluJo SINE Alu -3 309 1 1994 119 17 3 chr5 12579157 12579451 -187050699 + AluSx SINE Alu 1 298 -14 2156 89 14 3 chr5 12579874 12580179 -187049971 + AluSq SINE Alu 1 308 0 1698 178 132 64 chr5 12580422 12580819 -187049331 + MLT1D LTR MaLR 3 438 -67 2850 7 0 0 chr5 12580819 12581121 -187049029 - AluYb8 SINE Alu -16 302 1 1698 178 132 64 chr5 12581121 12581194 -187048956 + MLT1D LTR MaLR 438 505 0 860 136 0 0 chr5 12581271 12581389 -187048761 - FLAM_C SINE Alu -15 118 1 22 0 0 0 chr5 12581410 12581432 -187048718 + AT_rich Low_complexity Low_complexity 1 22 0 377 315 151 50 chr5 12583444 12583530 -187046620 + L1ME4a LINE L1 5439 5515 -2293 1778 87 101 56 chr5 12583530 12583816 -187046334 + AluSg SINE Alu 3 301 -9 377 315 151 50 chr5 12583816 12583967 -187046183 + L1ME4a LINE L1 5515 5700 -2108 346 271 192 34 chr5 12584019 12584196 -187045954 + L1ME4a LINE L1 5841 6045 -76 429 257 174 69 chr5 12584229 12584579 -187045571 - L2 LINE L2 -2 3311 2925 432 194 188 21 chr5 12584705 12584849 -187045301 - L1M4 LINE L1 -1177 4969 4802 26 64 0 0 chr5 12587472 12587519 -187042631 + AT_rich Low_complexity Low_complexity 1 47 0 216 0 0 0 chr5 12587926 12587950 -187042200 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2136 128 0 3 chr5 12587975 12588280 -187041870 + AluSq SINE Alu 1 304 -9 222 121 0 0 chr5 12588317 12588350 -187041800 + MIR SINE MIR 218 250 -12 321 230 50 20 chr5 12588466 12588566 -187041584 + L1ME3A LINE L1 6060 6162 -8 279 325 68 0 chr5 12588578 12588695 -187041455 + MIR SINE MIR 137 261 -1 2675 165 68 19 chr5 12588801 12589286 -187040864 - LTR22 LTR ERVK 0 509 1 506 220 57 38 chr5 12589327 12589486 -187040664 - MER46C DNA MER2_type -174 164 3 335 233 58 0 chr5 12589861 12589947 -187040203 + MER53 DNA DNA 5 95 -94 * 346 198 278 8 chr5 12589873 12589999 -187040151 - MER53 DNA DNA -7 182 23 2092 171 34 8 chr5 12590063 12590443 -187039707 + MLT1B LTR MaLR 1 390 0 1851 144 21 7 chr5 1259109