900 276 82 29 chr5_random 196 1017 -3777466 - L1ME LINE L1 -378 5784 4918 25 31 0 0 chr5_random 1426 1458 -3777025 + AT_rich Low_complexity Low_complexity 1 32 0 367 326 82 30 chr5_random 1504 1737 -3776746 + L2 LINE L2 1873 2117 -1197 895 237 94 74 chr5_random 1775 2168 -3776315 - MER57B LTR ERV1 0 434 3 464 159 26 33 chr5_random 2641 2792 -3775691 + CT-rich Low_complexity Low_complexity 2 151 0 252 0 0 0 chr5_random 2793 2821 -3775662 + (TC)n Simple_repeat Simple_repeat 1 28 0 1998 116 11 3 chr5_random 2821 3105 -3775378 - AluSx SINE Alu -24 288 3 850 201 96 48 chr5_random 3205 3498 -3774985 - MER31-int LTR ERV1 -3588 1348 1042 261 211 19 0 chr5_random 3758 3810 -3774673 - MER31-int LTR ERV1 -4062 874 822 401 263 35 58 chr5_random 4862 5033 -3773450 - MER5B DNA MER1_type 0 178 12 5108 67 13 0 chr5_random 5380 6051 -3772432 + L1PA7 LINE L1 5475 6154 0 261 0 0 0 chr5_random 6077 6106 -3772377 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 22 88 0 0 chr5_random 6427 6484 -3771999 + AT_rich Low_complexity Low_complexity 1 57 0 297 198 154 22 chr5_random 6613 6704 -3771779 - L1ME LINE L1 -1543 4603 4501 23 86 0 0 chr5_random 6857 6915 -3771568 + AT_rich Low_complexity Low_complexity 1 58 0 1758 174 3 3 chr5_random 7289 7577 -3770906 - AluSx SINE Alu -23 289 2 296 265 0 0 chr5_random 7965 8033 -3770450 - LTR40a LTR ERVL 0 519 452 1671 224 71 102 chr5_random 8593 9200 -3769283 - MLT1E LTR MaLR 0 593 6 1246 251 68 14 chr5_random 9789 10156 -3768327 - HERVL40 LTR ERVL -1426 4104 3718 301 271 10 31 chr5_random 10170 10266 -3768217 - HERVL40 LTR ERVL -2023 3507 3414 1560 222 11 65 chr5_random 10479 10925 -3767558 - MLT1C LTR MaLR -4 463 42 387 242 33 0 chr5_random 10957 11048 -3767435 - HERVL40 LTR ERVL -2172 3358 3265 522 283 67 37 chr5_random 11380 11649 -3766834 - HERVL40 LTR ERVL -5252 278 2 1772 204 79 12 chr5_random 11651 12083 -3766400 - LTR40b LTR ERVL -1 461 1 22 35 0 0 chr5_random 12344 12373 -3766110 + AT_rich Low_complexity Low_complexity 1 29 0 2171 111 0 3 chr5_random 12380 12677 -3765806 + AluSq SINE Alu 1 296 -17 721 183 8 0 chr5_random 12809 12935 -3765548 + FLAM_C SINE Alu 1 127 -16 37 23 0 0 chr5_random 12935 12979 -3765504 + AT_rich Low_complexity Low_complexity 1 44 0 984 233 54 70 chr5_random 15169 15538 -3762945 - MLT1A1 LTR MaLR -2 363 1 2105 232 53 72 chr5_random 15720 16874 -3761609 - L1ME2 LINE L1 -44 6122 4613 1538 104 4 29 chr5_random 16887 17128 -3761355 + AluSp SINE Alu 1 235 -78 301 254 182 45 chr5_random 17394 17594 -3760889 - L1MD3 LINE L1 -6 8027 7824 2180 74 0 11 chr5_random 17911 18241 -3760242 - AluY SINE Alu 0 327 1 24 77 0 0 chr5_random 18291 18343 -3760140 + AT_rich Low_complexity Low_complexity 1 52 0 1381 141 9 0 chr5_random 19690 19903 -3758580 + AluSg/x SINE Alu 81 295 -17 312 102 0 0 chr5_random 19904 19953 -3758530 + (GA)n Simple_repeat Simple_repeat 1 49 0 453 70 0 35 chr5_random 19954 20040 -3758443 + (GGAA)n Simple_repeat Simple_repeat 4 86 0 360 189 0 0 chr5_random 20029 20103 -3758380 + GA-rich Low_complexity Low_complexity 2 75 0 * 294 109 0 0 chr5_random 20381 20427 -3758056 + MADE1 DNA Mariner 35 80 0 1333 121 36 0 chr5_random 20430 20654 -3757829 - L1MA2 LINE L1 -30 6274 6043 1188 74 0 12 chr5_random 20938 21101 -3757382 - AluYa5 SINE Alu -3 308 148 220 216 20 0 chr5_random 23578 23629 -3754854 + CT-rich Low_complexity Low_complexity 1 52 0 751 97 0 0 chr5_random 23843 23946 -3754537 + AluY SINE Alu 195 297 -14 2624 198 32 4 chr5_random 24073 24569 -3753914 - MLT2B1 LTR ERVL -10 510 1 236 246 0 33 chr5_random 25258 25319 -3753164 + MER5A DNA MER1_type 128 186 -3 22 0 0 0 chr5_random 26826 26848 -3751635 + AT_rich Low_complexity Low_complexity 1 22 0 5590 163 70 9 chr5_random 27505 29441 -3749042 + L1MA4 LINE L1 4245 6299 -1 5775 31 0 0 chr5_random 29496 30179 -3748304 + L1PA4 LINE L1 5470 6152 -3 550 26 13 13 chr5_random 30190 30267 -3748216 + (TCTA)n Simple_repeat Simple_repeat 2 78 0 2260 88 0 3 chr5_random 30956 31250 -3747233 + AluY SINE Alu 1 293 -18 452 203 81 49 chr5_random 31857 31980 -3746503 - MER68 LTR ERV1 0 562 436 434 327 36 12 chr5_random 32638 32806 -3745677 + MIR SINE MIR 65 236 -26 181 347 53 11 chr5_random 33424 33519 -3744964 - L2 LINE L2 -463 2851 2753 23 68 0 0 chr5_random 33872 33916 -3744567 + AT_rich Low_complexity Low_complexity 1 44 0 308 273 11 0 chr5_random 33971 34074 -3744409 + L1M2 LINE L1 5483 5586 -535 1729 172 30 12 chr5_random 34161 34492 -3743991 + MER1B DNA MER1_type 1 337 0 1887 129 11 7 chr5_random 34624 34903 -3743580 + AluSp SINE Alu 1 280 -33 252 0 0 0 chr5_random 34904 34932 -3743551 + (CA)n Simple_repeat Simple_repeat 2 29 0 1004 220 23 60 chr5_random 35237 35572 -3742911 - MER93b LTR ERV1 -2 371 74 257 287 15 12 chr5_random 35883 36007 -3742476 - MER93b-int LTR ERV1 -146 6967 6586 1071 227 109 84 chr5_random 36251 36849 -3741634 - LTR49-int LTR ERV1 -188 4748 4136 274 228 18 0 chr5_random 36963 37020 -3741463 - LTR49-int LTR ERV1 -944 5387 5330 * 992 235 87 3 chr5_random 37019 37330 -3741153 - LTR49-int LTR ERV1 -1189 3747 3411 268 221 0 73 chr5_random 37731 37799 -3740684 + L2 LINE L2 3008 3070 -243 1981 139 0 19 chr5_random 37833 38150 -3740333 + AluSx SINE Alu 1 311 -1 817 108 0 0 chr5_random 38504 38661 -3739822 - AluSc SINE Alu 0 324 168 22 0 0 0 chr5_random 39104 39126 -3739357 + AT_rich Low_complexity Low_complexity 1 22 0 1099 216 34 76 chr5_random 39426 39833 -3738650 - MLT1B LTR MaLR 0 390 1 2018 236 61 41 chr5_random 40003 40947 -3737536 + L1MA8 LINE L1 2793 3755 -3810 41702 38 26 2 chr5_random 40951 46953 -3731530 + L1PA2 LINE L1 1 6154 -1 5645 214 41 8 chr5_random 46938 48413 -3730070 + L1MA8 LINE L1 3734 5257 -2308 * 2652 211 24 68 chr5_random 48413 49428 -3729055 - MER52A LTR ERV1 0 1755 531 788 183 7 20 chr5_random 49451 49604 -3728879 - MER52A LTR ERV1 -943 812 662 6695 174 35 40 chr5_random 49611 50086 -3728397 + L1MA8 LINE L1 5260 5736 -1974 349 217 0 0 chr5_random 50086 50146 -3728337 - MER52A LTR ERV1 -288 1467 1408 6695 174 35 40 chr5_random 50146 52003 -3726480 + L1MA8 LINE L1 5736 7708 -2 22 56 0 0 chr5_random 53166 53202 -3725281 + AT_rich Low_complexity Low_complexity 1 36 0 23 33 0 0 chr5_random 54348 54378 -3724105 + AT_rich Low_complexity Low_complexity 1 30 0 306 0 0 0 chr5_random 54780 54814 -3723669 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 22 35 0 0 chr5_random 54861 54890 -3723593 + GC_rich Low_complexity Low_complexity 1 29 0 1206 175 144 4 chr5_random 57629 57770 -3720713 - AluJb SINE Alu -9 293 173 495 0 0 0 chr5_random 57770 57825 -3720658 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 1206 175 144 4 chr5_random 57825 57940 -3720543 - AluJb SINE Alu -129 173 1 1006 131 17 34 chr5_random 58067 58242 -3720241 + MER2 DNA MER2_type 1 172 -173 248 250 103 0 chr5_random 58331 58399 -3720084 + MER2 DNA MER2_type 271 345 0 21 57 0 0 chr5_random 58703 58738 -3719745 + AT_rich Low_complexity Low_complexity 1 35 0 598 287 101 0 chr5_random 60073 60282 -3718201 - MIR SINE MIR -3 259 30 392 248 7 66 chr5_random 60416 60553 -3717930 + L1ME3A LINE L1 6032 6160 -10 258 216 14 0 chr5_random 60693 60767 -3717716 + (TA)n Simple_repeat Simple_repeat 1 75 0 186 308 131 0 chr5_random 61034 61164 -3717319 + L2 LINE L2 1910 2056 -1258 591 264 39 34 chr5_random 62027 62205 -3716278 + MLT1D LTR MaLR 1 179 -326 248 248 26 88 chr5_random 62257 62370 -3716113 - MLT1E2 LTR MaLR -469 157 52 2085 107 0 3 chr5_random 62392 62683 -3715800 + AluSx SINE Alu 1 290 -22 1271 195 13 29 chr5_random 62740 63039 -3715444 + MLT1D LTR MaLR 235 505 0 306 0 0 0 chr5_random 63948 63982 -3714501 + (TG)n Simple_repeat Simple_repeat 2 35 0 25 0 0 0 chr5_random 63989 64014 -3714469 + AT_rich Low_complexity Low_complexity 1 25 0 200 100 25 0 chr5_random 64718 64758 -3713725 + (TA)n Simple_repeat Simple_repeat 1 41 0 533 359 26 15 chr5_random 64979 65249 -3713234 - L3 LINE CR1 0 1577 1305 22 0 0 0 chr5_random 65511 65533 -3712950 + AT_rich Low_complexity Low_complexity 1 22 0 189 342 0 99 chr5_random 65785 65896 -3712587 - L3 LINE CR1 -891 686 587 558 178 159 45 chr5_random 67448 67605 -3710878 + MLT1B LTR MaLR 1 175 -215 424 319 126 21 chr5_random 68162 68353 -3710130 - MIR SINE MIR -50 212 2 240 35 0 0 chr5_random 68751 68780 -3709703 + (CAAAA)n Simple_repeat Simple_repeat 3 31 0 2276 104 3 0 chr5_random 68943 69242 -3709241 - AluSc SINE Alu -7 302 3 222 133 0 22 chr5_random 70976 71021 -3707462 + (TTTTTG)n Simple_repeat Simple_repeat 2 45 0 2044 118 3 3 chr5_random 71442 71739 -3706744 + AluSq SINE Alu 1 297 -16 259 316 53 18 chr5_random 72781 72895 -3705588 - L2 LINE L2 -13 3300 3183 391 290 54 42 chr5_random 73924 74255 -3704228 + L1ME4a LINE L1 5546 5880 -241 216 362 152 29 chr5_random 175547 175823 -3602660 + L2 LINE L2 2140 2449 -865 493 248 171 18 chr5_random 176225 176447 -3602036 + MER5C DNA MER1_type 1 256 -68 201 39 0 0 chr5_random 176960 176986 -3601497 + (TTTG)n Simple_repeat Simple_repeat 3 28 0 685 305 75 62 chr5_random 177216 177603 -3600880 + LTR16A LTR ERVL 64 455 -2 230 162 22 59 chr5_random 177630 177766 -3600717 + (TA)n Simple_repeat Simple_repeat 2 132 0 348 384 113 20 chr5_random 178573 179024 -3599459 + L2 LINE L2 2247 2739 -575 35 0 0 0 chr5_random 179154 179189 -3599294 + AT_rich Low_complexity Low_complexity 1 35 0 1996 216 79 17 chr5_random 179189 179920 -3598563 - Charlie1 DNA MER1_type -117 2644 1789 7562 19 7 0 chr5_random 179921 181249 -3597234 + L1PA4 LINE L1 4808 6142 -13 481 275 78 12 chr5_random 181329 181496 -3596987 + Charlie1 DNA MER1_type 1616 1793 -968 21 0 0 0 chr5_random 181496 181517 -3596966 + AT_rich Low_complexity Low_complexity 1 21 0 404 240 8 0 chr5_random 181916 182037 -3596446 + (TA)n Simple_repeat Simple_repeat 1 122 0 252 316 187 0 chr5_random 183121 183260 -3595223 + L3 LINE CR1 185 349 -1228 211 389 33 0 chr5_random 183394 183484 -3594999 + L3 LINE CR1 1347 1439 -138 2173 99 0 29 chr5_random 183528 183840 -3594643 - AluSq SINE Alu -10 303 1 297 298 24 0 chr5_random 183861 183945 -3594538 - MER113 DNA MER1_type? 0 521 436 26 0 0 0 chr5_random 185278 185304 -3593179 + AT_rich Low_complexity Low_complexity 1 26 0 1968 78 4 0 chr5_random 185329 185598 -3592885 - L1PA10 LINE L1 -3 6165 5896 2342 135 0 0 chr5_random 185978 186312 -3592171 + MER7A DNA MER2_type 3 334 -12 276 30 0 0 chr5_random 186380 186413 -3592070 + (GA)n Simple_repeat Simple_repeat 2 34 0 2058 177 20 0 chr5_random 186414 186765 -3591718 - MLT2D LTR ERVL -56 358 1 34 72 0 0 chr5_random 186924 186993 -3591490 + AT_rich Low_complexity Low_complexity 1 69 0 1506 184 57 9 chr5_random 187037 187368 -3591115 + MER7A DNA MER2_type 2 346 0 22 56 0 0 chr5_random 188710 188746 -3589737 + AT_rich Low_complexity Low_complexity 1 36 0 270 295 13 13 chr5_random 188805 188883 -3589600 - L2 LINE L2 0 3313 3236 2064 53 4 4 chr5_random 188994 189259 -3589224 - AluY SINE Alu -46 265 1 226 0 59 0 chr5_random 189272 189306 -3589177 + (CAAAAA)n Simple_repeat Simple_repeat 1 36 0 780 334 148 23 chr5_random 189370 189908 -3588575 - L2 LINE L2 -204 3109 2502 288 175 32 0 chr5_random 189960 190023 -3588460 - MER53 DNA DNA 0 189 125 35 41 0 0 chr5_random 190047 190096 -3588387 + AT_rich Low_complexity Low_complexity 1 49 0 546 117 54 9 chr5_random 190119 190230 -3588253 - MER53 DNA DNA -73 116 1 1556 261 84 16 chr5_random 190438 190994 -3587489 - L1MCc LINE L1 -5800 623 30 288 111 0 0 chr5_random 192637 192682 -3585801 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 26 0 0 0 chr5_random 193127 193153 -3585330 + AT_rich Low_complexity Low_complexity 1 26 0 280 125 42 0 chr5_random 193153 193201 -3585282 - L1ME1 LINE L1 -25 6141 6092 2023 119 7 0 chr5_random 193370 193656 -3584827 - AluSq SINE Alu -25 288 1 4155 222 45 36 chr5_random 193707 195586 -3582897 - L1MCa LINE L1 -4591 1973 1 325 303 8 17 chr5_random 197163 197282 -3581201 + MER94 DNA DNA 7 124 -10 619 299 87 6 chr5_random 197324 197679 -3580804 + Charlie7 DNA MER1_type 1614 1997 -615 192 143 0 0 chr5_random 197684 197726 -3580757 + (TA)n Simple_repeat Simple_repeat 1 42 0 1584 195 87 6 chr5_random 197744 198078 -3580405 + MLT1A1 LTR MaLR 1 361 -4 3911 219 105 83 chr5_random 198083 198804 -3579679 + MLT1A1-int LTR MaLR 2 763 -972 1781 144 7 4 chr5_random 198804 199081 -3579402 + AluSx SINE Alu 23 300 -12 3911 219 105 83 chr5_random 199081 199592 -3578891 + MLT1A1-int LTR MaLR 763 1261 -474 1145 171 107 0 chr5_random 199580 199796 -3578687 - L1MC/D LINE L1 -597 5747 5509 * 37 62 0 0 chr5_random 200329 200394 -3578089 + AT_rich Low_complexity Low_complexity 1 65 0 4069 109 58 43 chr5_random 200719 201654 -3576829 + pTR5 LTR ERV1 754 2025 -413 356 204 31 20 chr5_random 201654 201752 -3576731 + LTR30 LTR ERV1 544 642 -80 1382 125 5 9 chr5_random 201755 201979 -3576504 + pTR5 LTR ERV1 172 394 -2044 30 69 0 0 chr5_random 203062 203120 -3575363 + AT_rich Low_complexity Low_complexity 1 58 0 419 365 74 30 chr5_random 203325 203587 -3574896 + MLT1K LTR MaLR 3 297 -291 2604 179 19 17 chr5_random 203587 204128 -3574355 + MER34 LTR ERV1 1 542 0 419 365 74 30 chr5_random 204128 204336 -3574147 + MLT1K LTR MaLR 297 494 -94 2244 202 36 56 chr5_random 204337 204891 -3573592 + MER67A LTR ERV1 1 543 0 289 172 17 52 chr5_random 205310 205426 -3573057 + CT-rich Low_complexity Low_complexity 3 114 0 595 231 46 64 chr5_random 206158 206331 -3572152 - MER5B DNA MER1_type -7 171 2 30 27 0 0 chr5_random 206630 206667 -3571816 + AT_rich Low_complexity Low_complexity 1 37 0 259 392 20 7 chr5_random 206814 206962 -3571521 - L1MC/D LINE L1 -2165 5643 5494 21 0 0 0 chr5_random 207152 207173 -3571310 + AT_rich Low_complexity Low_complexity 1 21 0 357 86 0 0 chr5_random 207437 207495 -3570988 + (CA)n Simple_repeat Simple_repeat 1 58 0 588 229 0 8 chr5_random 207567 207689 -3570794 - MLT1C LTR MaLR -7 460 340 355 282 146 23 chr5_random 207692 208255 -3570228 - L1MEc LINE L1 -2590 3625 2908 1051 211 18 32 chr5_random 208284 208563 -3569920 - L1MC2 LINE L1 -184 6160 5886 372 22 0 0 chr5_random 208597 208642 -3569841 + (TG)n Simple_repeat Simple_repeat 1 45 0 319 246 44 108 chr5_random 208652 208855 -3569628 - L1 LINE L1 -1039 5525 5336 3374 246 94 64 chr5_random 208880 210810 -3567673 - L1MCb LINE L1 -3617 2947 803 201 39 0 0 chr5_random 210810 210836 -3567647 + (TTG)n Simple_repeat Simple_repeat 2 27 0 3374 246 94 64 chr5_random 210836 211618 -3566865 - L1MCb LINE L1 -5761 803 46 404 281 120 35 chr5_random 211673 212271 -3566212 - L1MEc LINE L1 -3403 2812 2204 22 35 0 0 chr5_random 212326 212355 -3566128 + AT_rich Low_complexity Low_complexity 1 29 0 45 75 0 0 chr5_random 212469 212563 -3565920 + AT_rich Low_complexity Low_complexity 1 94 0 1946 94 0 0 chr5_random 212785 213041 -3565442 - AluY SINE Alu 0 311 56 282 341 58 17 chr5_random 213079 213252 -3565231 - HAL1 LINE L1 -1990 517 338 331 268 243 59 chr5_random 213550 213822 -3564661 + L2 LINE L2 2992 3313 0 261 0 0 0 chr5_random 214923 214952 -3563531 + (TAAA)n Simple_repeat Simple_repeat 4 32 0 422 224 0 12 chr5_random 216245 216330 -3562153 - MER90 LTR ERV1 -1 613 530 * 1521 225 38 28 chr5_random 216327 216750 -3561733 - MER90 LTR ERV1 -187 427 1 1968 129 0 4 chr5_random 218012 218338 -3560145 - AluSc SINE Alu 0 325 1 24 53 0 0 chr5_random 218338 218376 -3560107 + AT_rich Low_complexity Low_complexity 1 38 0 310 266 125 31 chr5_random 218644 218772 -3559711 - MIR SINE MIR -48 214 75 981 204 50 59 chr5_random 218881 219101 -3559382 - AluJo SINE Alu -30 282 65 971 114 0 0 chr5_random 219484 219615 -3558868 + AluSc SINE Alu 1 131 -178 2145 120 3 16 chr5_random 219618 219752 -3558731 + AluSc SINE Alu 1 135 -174 2102 121 0 3 chr5_random 219752 220057 -3558426 + AluSg SINE Alu 1 304 -6 2145 120 3 16 chr5_random 220057 220230 -3558253 + AluSc SINE Alu 135 304 -5 1511 204 11 0 chr5_random 221222 221522 -3556961 - AluJb SINE Alu 0 307 5 186 43 0 0 chr5_random 223367 223390 -3555093 + (CA)n Simple_repeat Simple_repeat 2 24 0 320 258 0 43 chr5_random 224672 224765 -3553718 + MIR SINE MIR 34 122 -140 3433 267 92 29 chr5_random 224858 226251 -3552232 + L1M4 LINE L1 44 1524 -5018 273 307 100 7 chr5_random 226335 226475 -3552008 + L1M4 LINE L1 1942 2094 -4552 4042 252 42 22 chr5_random 226494 228258 -3550225 + L1M4 LINE L1 2207 4004 -2640 3808 232 57 65 chr5_random 228277 228552 -3549931 + L1MB5 LINE L1 3331 3607 -2567 2027 101 76 25 chr5_random 228552 228909 -3549574 + THE1C LTR MaLR 1 375 0 3808 232 57 65 chr5_random 228909 228975 -3549508 + L1MB5 LINE L1 3607 3672 -2502 884 221 6 0 chr5_random 228975 229138 -3549345 + FAM SINE Alu 4 167 -8 3808 232 57 65 chr5_random 229138 229150 -3549333 + L1MB5 LINE L1 3672 3683 -2491 2053 110 0 3 chr5_random 229150 229455 -3549028 + AluSx SINE Alu 1 304 0 3808 232 57 65 chr5_random 229455 230572 -3547911 + L1MB5 LINE L1 3683 4807 -1367 1563 194 23 0 chr5_random 230572 230871 -3547612 + AluJo SINE Alu 6 311 -1 3808 232 57 65 chr5_random 230871 231577 -3546906 + L1MB5 LINE L1 4807 5490 -684 2074 115 11 0 chr5_random 231577 231886 -3546597 + AluSp SINE Alu 1 312 0 3808 232 57 65 chr5_random 231886 232558 -3545925 + L1MB5 LINE L1 5490 6166 -8 364 258 159 33 chr5_random 232704 232886 -3545597 - MER92B LTR ERV1 0 636 432 2028 129 211 2 chr5_random 233727 234129 -3544354 - LTR19A LTR ERV1 0 486 1 2112 254 119 24 chr5_random 234146 234900 -3543583 + MER69B DNA AcHobo 243 1068 -158 1509 247 70 24 chr5_random 234900 235369 -3543114 + MLT1D LTR MaLR 3 493 -12 230 114 0 0 chr5_random 235473 235508 -3542975 + MLT1D LTR MaLR 592 626 0 296 222 103 0 chr5_random 235574 235691 -3542792 + MER69B DNA AcHobo 1098 1226 0 193 286 16 32 chr5_random 235760 235823 -3542660 - L2 LINE L2 -13 3259 3198 196 283 17 17 chr5_random 235934 235994 -3542489 + MIR SINE MIR 91 150 -112 1804 126 23 0 chr5_random 236082 236343 -3542140 + AluSx SINE Alu 32 298 -14 306 73 0 0 chr5_random 236924 236957 -3541526 + (CA)n Simple_repeat Simple_repeat 1 74 0 306 73 0 0 chr5_random 236957 236998 -3541485 + (CA)n Simple_repeat Simple_repeat 2 42 0 22 35 0 0 chr5_random 237177 237206 -3541277 + AT_rich Low_complexity Low_complexity 1 29 0 2020 139 0 3 chr5_random 237287 237589 -3540894 + AluSx SINE Alu 1 301 -11 1315 277 94 31 chr5_random 237993 238902 -3539581 + L1ME3A LINE L1 5003 5980 -190 254 293 52 26 chr5_random 238929 239045 -3539438 + L1ME3A LINE L1 6052 6170 0 2074 138 125 10 chr5_random 240507 240891 -3537592 - MSTA LTR MaLR 0 428 1 189 371 14 0 chr5_random 241706 241776 -3536707 - MIR SINE MIR -156 106 36 186 312 147 45 chr5_random 242732 242889 -3535594 - L3b LINE CR1 -10 1573 1401 4106 130 70 18 chr5_random 243257 243996 -3534487 - LTR1 LTR ERV1 0 785 8 226 274 116 24 chr5_random 244737 244901 -3533582 - L1MC5 LINE L1 -48 7913 7735 243 178 79 10 chr5_random 246558 246659 -3531824 + (TA)n Simple_repeat Simple_repeat 1 108 0 333 292 11 0 chr5_random 246744 246833 -3531650 - MIR SINE MIR -107 155 66 215 107 89 0 chr5_random 247102 247158 -3531325 + (CAAA)n Simple_repeat Simple_repeat 3 63 0 436 356 144 0 chr5_random 249436 249616 -3528867 + MIR SINE MIR 39 244 -18 29 28 0 0 chr5_random 250541 250577 -3527906 + AT_rich Low_complexity Low_complexity 1 36 0 23 78 0 0 chr5_random 250629 250680 -3527803 + AT_rich Low_complexity Low_complexity 1 51 0 2086 103 11 0 chr5_random 251198 251526 -3526957 - AluY SINE Alu 0 331 1 3653 120 143 132 chr5_random 251669 253043 -3525440 - pTR5 LTR ERV1 0 2438 743 2556 21 0 0 chr5_random 253372 253663 -3524820 - L1P2 LINE L1 -417 5738 5448 * 2911 51 0 0 chr5_random 253658 254029 -3524454 + L1P LINE L1 5030 5400 -746 389 182 55 91 chr5_random 254029 254139 -3524344 - Charlie1a DNA MER1_type -1160 295 190 234 91 0 0 chr5_random 254177 254210 -3524273 - MER96B DNA MER1_type? -193 224 192 2174 105 0 13 chr5_random 254308 254612 -3523871 - AluSc SINE Alu -9 300 1 732 204 59 45 chr5_random 254619 254743 -3523740 + MER96B DNA MER1_type? 194 324 -93 1821 153 135 13 chr5_random 254743 255121 -3523362 + MSTA LTR MaLR 3 426 -2 732 204 59 45 chr5_random 255121 255216 -3523267 + MER96B DNA MER1_type? 324 416 -1 647 218 70 0 chr5_random 255227 255369 -3523114 - Charlie1a DNA MER1_type -1300 155 4 29 28 0 0 chr5_random 255379 255415 -3523068 + AT_rich Low_complexity Low_complexity 1 36 0 2021 130 14 3 chr5_random 255535 255828 -3522655 + AluSx SINE Alu 5 300 -12 24 32 0 0 chr5_random 256321 256352 -3522131 + AT_rich Low_complexity Low_complexity 1 31 0 224 316 73 52 chr5_random 258735 258871 -3519612 + MIR3 SINE MIR 12 150 -58 39 0 0 0 chr5_random 258968 259007 -3519476 + AT_rich Low_complexity Low_complexity 1 39 0 336 250 270 0 chr5_random 259790 259938 -3518545 + MER5A DNA MER1_type 2 189 0 24 32 0 0 chr5_random 260529 260560 -3517923 + AT_rich Low_complexity Low_complexity 1 31 0 5644 124 15 1 chr5_random 261569 262518 -3515965 + L1PA13 LINE L1 5198 6158 -5 21 57 0 0 chr5_random 263004 263039 -3515444 + AT_rich Low_complexity Low_complexity 1 35 0 205 337 93 31 chr5_random 263307 263500 -3514983 - MIR SINE MIR -7 255 51 192 200 0 0 chr5_random 264618 264658 -3513825 + A-rich Low_complexity Low_complexity 122 161 0 * 702 151 22 22 chr5_random 264651 264830 -3513653 + GA-rich Low_complexity Low_complexity 2 180 0 308 138 15 46 chr5_random 266150 266215 -3512268 - MLT1F LTR MaLR -16 526 464 870 202 11 16 chr5_random 266478 266666 -3511817 - AluJb SINE Alu -5 307 121 465 275 54 13 chr5_random 266674 266823 -3511660 - MLT1H LTR MaLR -392 157 3 273 363 70 10 chr5_random 267735 267936 -3510547 + MIR SINE MIR 12 224 -38 1953 162 0 7 chr5_random 267951 268260 -3510223 + AluJb SINE Alu 1 307 -5 208 132 0 38 chr5_random 268390 268443 -3510040 + (TTC)n Simple_repeat Simple_repeat 2 52 0 26 30 0 0 chr5_random 268920 268953 -3509530 + AT_rich Low_complexity Low_complexity 1 33 0 23 78 0 0 chr5_random 269125 269176 -3509307 + AT_rich Low_complexity Low_complexity 1 51 0 22 35 0 0 chr5_random 269648 269677 -3508806 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5_random 270975 270996 -3507487 + AT_rich Low_complexity Low_complexity 1 21 0 4701 208 16 36 chr5_random 271005 271647 -3506836 - L1 LINE L1 -1520 4626 4018 1541 179 4 11 chr5_random 271647 271920 -3506563 - AluJb SINE Alu -27 285 15 4701 208 16 36 chr5_random 271920 272490 -3505993 - L1 LINE L1 -2128 4018 3438 531 230 140 6 chr5_random 272492 272670 -3505813 + MER57A LTR ERV1 202 403 0 918 173 22 140 chr5_random 272914 273185 -3505298 + MER101B LTR ERV1 1 239 -331 1714 169 41 0 chr5_random 273300 273472 -3505011 - AluSx SINE Alu -5 307 117 261 0 0 0 chr5_random 273472 273501 -3504982 + (TG)n Simple_repeat Simple_repeat 2 30 0 1714 169 41 0 chr5_random 273501 273623 -3504860 - AluSx SINE Alu -195 117 1 290 258 32 21 chr5_random 273649 273742 -3504741 + MER101 LTR ERV1 346 439 -35 185 0 40 0 chr5_random 274203 274228 -3504255 + (TTTTTG)n Simple_repeat Simple_repeat 3 28 0 2280 103 3 0 chr5_random 274231 274542 -3503941 - AluSp SINE Alu -1 312 1 1036 226 12 23 chr5_random 274565 274822 -3503661 + MER34C LTR ERV1 160 413 -172 258 267 47 0 chr5_random 274961 275047 -3503436 + MER57A-int LTR ERV1 904 993 -3943 575 181 98 60 chr5_random 275091 275306 -3503177 + MER57A-int LTR ERV1 1088 1310 -3626 860 246 118 71 chr5_random 275306 275562 -3502921 + MER57A-int LTR ERV1 1467 1710 -3226 2165 114 0 13 chr5_random 275562 275870 -3502613 + AluSq SINE Alu 5 308 -5 860 246 118 71 chr5_random 275870 276145 -3502338 + MER57A-int LTR ERV1 1710 2023 -2913 369 264 83 42 chr5_random 276154 276370 -3502113 + MER57A-int LTR ERV1 2129 2353 -2583 351 213 0 0 chr5_random 276416 276496 -3501987 + (TA)n Simple_repeat Simple_repeat 2 81 0 542 251 138 65 chr5_random 276501 276900 -3501583 + MSTC LTR MaLR 1 428 0 1214 234 41 26 chr5_random 276982 277371 -3501112 + MER57A-int LTR ERV1 2564 2958 -1978 3435 159 34 20 chr5_random 277715 278363 -3500120 + L1PA16 LINE L1 5501 6157 -9 2521 141 50 2 chr5_random 278773 279176 -3499307 + MSTB LTR MaLR 1 422 -4 205 314 163 26 chr5_random 279729 279882 -3498601 + MER5B DNA MER1_type 2 175 -3 2367 234 51 77 chr5_random 280733 281694 -3496789 + MER57A-int LTR ERV1 4827 5762 -1775 852 247 27 26 chr5_random 281811 282189 -3496294 + MER57A-int LTR ERV1 2716 6169 -1368 222 37 0 0 chr5_random 282193 282220 -3496263 + (TA)n Simple_repeat Simple_repeat 2 28 0 2009 122 0 64 chr5_random 282220 282547 -3495936 - AluSx SINE Alu -6 306 1 445 217 52 49 chr5_random 283313 283534 -3494949 + MER57A-int LTR ERV1 6924 7537 0 815 247 79 73 chr5_random 283568 283908 -3494575 + MER57A LTR ERV1 60 401 -2 22 70 0 0 chr5_random 284481 284524 -3493959 + AT_rich Low_complexity Low_complexity 1 43 0 1991 165 0 0 chr5_random 284558 284867 -3493616 - AluSx SINE Alu -3 309 1 2360 112 80 30 chr5_random 285164 285565 -3492918 - MSTA LTR MaLR 0 428 8 8377 181 36 3 chr5_random 285572 287170 -3491313 - MSTA-int LTR MaLR 0 1651 1 1839 171 139 5 chr5_random 287174 287549 -3490934 - MSTA LTR MaLR 0 428 4 201 121 0 0 chr5_random 288174 288207 -3490276 + (TG)n Simple_repeat Simple_repeat 2 34 0 24 0 0 0 chr5_random 289577 289601 -3488882 + AT_rich Low_complexity Low_complexity 1 24 0 830 218 276 9 chr5_random 289735 290079 -3488404 + L1MD2 LINE L1 3870 4305 -1841 3834 226 111 23 chr5_random 290414 292281 -3486202 + L1MD2 LINE L1 4312 6359 0 22 35 0 0 chr5_random 292906 292935 -3485548 + AT_rich Low_complexity Low_complexity 1 29 0 23 86 0 0 chr5_random 293152 293210 -3485273 + AT_rich Low_complexity Low_complexity 1 58 0 213 121 0 0 chr5_random 293387 293420 -3485063 + (A)n Simple_repeat Simple_repeat 1 33 0 27 81 0 0 chr5_random 294098 294160 -3484323 + AT_rich Low_complexity Low_complexity 1 62 0 4417 181 20 8 chr5_random 294755 295651 -3482832 - L1M2 LINE L1 -1705 4441 3535 3020 189 6 3 chr5_random 295662 296286 -3482197 + L1M2 LINE L1 4426 5051 -1095 490 346 57 23 chr5_random 296337 296690 -3481793 - L1MEc LINE L1 -3432 2950 2586 30 59 0 0 chr5_random 296930 296981 -3481502 + AT_rich Low_complexity Low_complexity 1 51 0 569 313 86 53 chr5_random 297289 297857 -3480626 - HAL1b LINE L1 -696 652 66 27 49 0 0 chr5_random 298171 298212 -3480271 + AT_rich Low_complexity Low_complexity 1 41 0 327 262 87 14 chr5_random 298880 299123 -3479360 - L1MEc LINE L1 -4719 1663 1299 205 205 0 0 chr5_random 299123 299162 -3479321 + (TA)n Simple_repeat Simple_repeat 2 40 0 589 309 70 74 chr5_random 299176 299346 -3479137 - L1MEc LINE L1 -5128 1435 1266 2409 54 0 3 chr5_random 299346 299642 -3478841 - AluY SINE Alu -2 309 15 589 309 70 74 chr5_random 299642 299673 -3478810 - L1MEc LINE L1 -5297 1266 1236 1459 195 3 45 chr5_random 299673 299981 -3478502 - AluJo SINE Alu -17 295 1 589 309 70 74 chr5_random 299981 300402 -3478081 - L1MEc LINE L1 -5327 1236 814 2310 75 7 16 chr5_random 301392 301698 -3476785 + AluSp SINE Alu 1 303 -10 200 261 204 23 chr5_random 305110 305198 -3473285 + MIR SINE MIR 53 156 -106 21 0 0 0 chr5_random 305607 305628 -3472855 + AT_rich Low_complexity Low_complexity 1 21 0 333 0 0 0 chr5_random 306521 306558 -3471925 + (CA)n Simple_repeat Simple_repeat 1 37 0 685 181 0 22 chr5_random 307432 307570 -3470913 + FRAM SINE Alu 40 174 -2 40 21 0 0 chr5_random 308398 308445 -3470038 + AT_rich Low_complexity Low_complexity 1 47 0 895 160 123 0 chr5_random 309066 309253 -3469230 - L1MA7 LINE L1 0 6291 6082 * 2072 182 19 17 chr5_random 309236 309648 -3468835 + L1M2 LINE L1 5400 5812 -479 23 54 0 0 chr5_random 310019 310056 -3468427 + AT_rich Low_complexity Low_complexity 1 37 0 336 380 16 0 chr5_random 310057 310178 -3468305 + L2 LINE L2 3150 3272 0 759 310 74 42 chr5_random 310927 311401 -3467082 - L2 LINE L2 -2 3311 2823 1817 194 103 35 chr5_random 311526 312010 -3466473 - MLT2B1 LTR ERVL 0 520 4 23 33 0 0 chr5_random 312506 312536 -3465947 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr5_random 313716 313744 -3464739 + AT_rich Low_complexity Low_complexity 1 28 0 3326 123 53 9 chr5_random 313876 314446 -3464037 + LTR49 LTR ERV1 1 595 0 21 36 0 0 chr5_random 316218 316246 -3462237 + AT_rich Low_complexity Low_complexity 1 28 0 2005 115 6 86 chr5_random 317576 317915 -3460568 - AluSq SINE Alu 0 313 2 244 349 0 0 chr5_random 317915 318001 -3460482 + MIR SINE MIR 97 182 -80 606 316 24 72 chr5_random 319487 319623 -3458860 + L2 LINE L2 2719 2860 -453 3569 219 98 16 chr5_random 319623 320584 -3457899 + MER45B DNA AcHobo 1 1040 0 606 316 24 72 chr5_random 320584 320945 -3457538 + L2 LINE L2 2860 3191 -122 38 51 0 0 chr5_random 321171 321230 -3457253 + AT_rich Low_complexity Low_complexity 1 59 0 477 104 0 0 chr5_random 322565 322581 -3455902 + (TA)n Simple_repeat Simple_repeat 1 93 0 477 104 0 0 chr5_random 322581 322658 -3455825 + (TA)n Simple_repeat Simple_repeat 2 78 0 1645 192 6 16 chr5_random 322838 323150 -3455333 - AluJb SINE Alu -1 311 3 2236 125 3 6 chr5_random 324140 324491 -3453992 - L1PB1 LINE L1 -3 6148 5799 308 110 43 37 chr5_random 324704 324868 -3453615 + (TTATA)n Simple_repeat Simple_repeat 5 169 0 275 112 102 0 chr5_random 324989 325127 -3453356 + (TA)n Simple_repeat Simple_repeat 1 152 0 274 128 58 41 chr5_random 325133 325305 -3453178 + (TTATA)n Simple_repeat Simple_repeat 5 179 0 4237 217 11 4 chr5_random 325351 326336 -3452147 - L1 LINE L1 -745 5401 4410 21 0 0 0 chr5_random 328085 328106 -3450377 + AT_rich Low_complexity Low_complexity 1 21 0 299 197 80 131 chr5_random 379884 380021 -3398462 + MIR SINE MIR 112 241 -21 22 0 0 0 chr5_random 380981 381003 -3397480 + AT_rich Low_complexity Low_complexity 1 22 0 302 266 44 57 chr5_random 381117 381346 -3397137 + L1MCc LINE L1 20 245 -6178 1614 261 46 28 chr5_random 381833 382334 -3396149 + LTR40a LTR ERVL 7 516 -3 287 262 28 14 chr5_random 382720 382861 -3395622 + L1MCc LINE L1 1366 1508 -4915 28 61 0 0 chr5_random 382912 382961 -3395522 + AT_rich Low_complexity Low_complexity 1 49 0 26975 127 34 31 chr5_random 383147 388764 -3389719 + L1PA7 LINE L1 201 5977 -492 4644 75 2 0 chr5_random 388764 389350 -3389133 + LTR14C LTR ERVK 1 587 0 26975 127 34 31 chr5_random 389350 389845 -3388638 + L1PA7 LINE L1 5977 6469 0 6445 199 55 19 chr5_random 389846 392069 -3386414 + L1MCc LINE L1 2970 5229 -1712 3123 88 27 18 chr5_random 392069 392512 -3385971 - MLT2A2 LTR ERVL 0 453 7 15265 101 12 11 chr5_random 392512 394664 -3383819 - HERVL-A2 LTR ERVL -38 5616 3462 193 417 46 14 chr5_random 397389 397605 -3380878 + L3 LINE CR1 1278 1500 -77 1928 135 0 39 chr5_random 397704 398015 -3380468 + AluSx SINE Alu 1 299 -13 2617 269 14 36 chr5_random 398989 399969 -3378514 - L1ME1 LINE L1 -50 6116 5159 3772 182 28 16 chr5_random 399979 400753 -3377730 - L1MC3 LINE L1 -8 7777 6994 4545 210 73 27 chr5_random 400757 401997 -3376486 - L1MC3 LINE L1 -1136 6649 5353 389 264 24 18 chr5_random 401998 402165 -3376318 - L1MC3 LINE L1 -984 5162 4995 573 251 43 62 chr5_random 402167 402378 -3376105 - MER58C DNA MER1_type -5 210 4 3063 275 62 38 chr5_random 402381 402452 -3376031 - L1MC3 LINE L1 -1141 5005 4937 273 57 0 0 chr5_random 402452 402487 -3375996 + (TG)n Simple_repeat Simple_repeat 2 36 0 3063 275 62 38 chr5_random 402487 403662 -3374821 - L1MC3 LINE L1 -1209 4937 3701 1945 148 0 7 chr5_random 403662 403966 -3374517 - AluSg1 SINE Alu -7 302 1 3063 275 62 38 chr5_random 403966 404495 -3373988 - L1MC3 LINE L1 -2445 3701 3186 4169 185 74 45 chr5_random 405007 405965 -3372518 - MER52A LTR ERV1 -575 1180 217 207 69 0 0 chr5_random 406256 406285 -3372198 + (TC)n Simple_repeat Simple_repeat 2 30 0 22 80 0 0 chr5_random 407859 407909 -3370574 + AT_rich Low_complexity Low_complexity 1 50 0 25 0 0 0 chr5_random 407996 408021 -3370462 + AT_rich Low_complexity Low_complexity 1 25 0 27 49 0 0 chr5_random 408077 408118 -3370365 + AT_rich Low_complexity Low_complexity 1 41 0 25 31 0 0 chr5_random 408350 408382 -3370101 + AT_rich Low_complexity Low_complexity 1 32 0 2177 75 0 0 chr5_random 408690 408958 -3369525 + AluSx SINE Alu 31 298 -14 263 104 21 0 chr5_random 409119 409167 -3369316 + (CA)n Simple_repeat Simple_repeat 2 50 0 1423 204 42 74 chr5_random 410191 410648 -3367835 - MER39 LTR ERV1 0 707 266 23 78 0 0 chr5_random 411447 411498 -3366985 + AT_rich Low_complexity Low_complexity 1 51 0 371 316 18 0 chr5_random 412625 412739 -3365744 + L2 LINE L2 3189 3304 -9 33 56 0 0 chr5_random 413492 413546 -3364937 + AT_rich Low_complexity Low_complexity 1 54 0 31 58 0 0 chr5_random 413774 413826 -3364657 + AT_rich Low_complexity Low_complexity 1 52 0 186 43 0 0 chr5_random 414766 414789 -3363694 + (CA)n Simple_repeat Simple_repeat 2 24 0 943 272 84 57 chr5_random 414822 416092 -3362391 + L1MEc LINE L1 1535 2834 -3381 4790 173 24 8 chr5_random 416092 416985 -3361498 + L1MC1 LINE L1 5413 6319 -14 943 272 84 57 chr5_random 416985 417479 -3361004 + L1MEc LINE L1 2834 3313 -2902 235 213 0 0 chr5_random 417525 417572 -3360911 + (TG)n Simple_repeat Simple_repeat 2 48 0 1127 115 6 6 chr5_random 417658 417823 -3360660 - AluSg/x SINE Alu -20 292 128 774 304 61 24 chr5_random 417851 418672 -3359811 + L1ME LINE L1 4744 5612 -550 2003 161 58 44 chr5_random 418672 419100 -3359383 - Tigger2a DNA MER2_type 0 434 1 774 304 61 24 chr5_random 419100 419269 -3359214 + L1ME LINE L1 5612 5773 -389 409 348 38 24 chr5_random 419420 419713 -3358770 + L1MEc LINE L1 3471 3767 -2448 569 292 68 48 chr5_random 420153 420547 -3357936 + HAL1b LINE L1 280 681 -667 3466 169 83 11 chr5_random 420833 421529 -3356954 + Tigger1 DNA MER2_type 1673 2418 0 25 51 0 0 chr5_random 421653 421692 -3356791 + AT_rich Low_complexity Low_complexity 1 39 0 877 216 58 46 chr5_random 421728 421870 -3356613 - L1MC/D LINE L1 -494 5748 5600 2553 52 0 0 chr5_random 421870 422175 -3356308 - AluY SINE Alu -6 305 1 877 216 58 46 chr5_random 422175 422291 -3356192 - L1MC/D LINE L1 -642 5600 5487 4144 225 53 19 chr5_random 422309 423573 -3354910 - L1MA7 LINE L1 0 6291 4965 1464 113 0 19 chr5_random 423573 423785 -3354698 + AluSq SINE Alu 91 298 -15 4144 225 53 19 chr5_random 423785 424015 -3354468 - L1MA7 LINE L1 -1326 4965 4744 244 297 31 70 chr5_random 425257 425385 -3353098 - MIR3 SINE MIR -3 205 83 555 264 324 7 chr5_random 426004 426288 -3352195 + MLT1A2 LTR MaLR 1 374 0 1529 153 98 11 chr5_random 426947 427222 -3351261 + AluSx SINE Alu 1 299 -13 21 57 0 0 chr5_random 428569 428604 -3349879 + AT_rich Low_complexity Low_complexity 1 35 0 1335 227 20 35 chr5_random 429594 429938 -3348545 + MER58B DNA MER1_type 3 341 0 2238 118 0 3 chr5_random 429971 430277 -3348206 - AluSg SINE Alu -5 305 1 24 53 0 0 chr5_random 431809 431847 -3346636 + AT_rich Low_complexity Low_complexity 1 38 0 1337 212 22 7 chr5_random 432244 432518 -3345965 + AluJo SINE Alu 1 278 -34 216 0 0 0 chr5_random 432522 432546 -3345937 + (TAA)n Simple_repeat Simple_repeat 1 24 0 2172 121 0 6 chr5_random 432615 432929 -3345554 + AluSx SINE Alu 1 312 0 1952 104 28 0 chr5_random 433053 433340 -3345143 - L1PA13 LINE L1 -11 6152 5858 534 182 6 0 chr5_random 433340 433458 -3345025 + L1 LINE L1 5176 5298 -848 390 341 62 6 chr5_random 433496 433675 -3344808 - MIR SINE MIR -37 225 37 21 36 0 0 chr5_random 434306 434334 -3344149 + AT_rich Low_complexity Low_complexity 1 28 0 1622 214 64 41 chr5_random 434613 435052 -3343431 - MLT1C LTR MaLR -18 449 1 2223 91 24 0 chr5_random 435308 435604 -3342879 - AluSp SINE Alu -10 303 1 1466 164 7 47 chr5_random 435657 435744 -3342739 + AluJb SINE Alu 39 128 -184 297 0 0 0 chr5_random 435744 435777 -3342706 + (CA)n Simple_repeat Simple_repeat 2 34 0 1466 164 7 47 chr5_random 435777 435964 -3342519 + AluJb SINE Alu 128 302 -10 34 42 0 0 chr5_random 436321 436369 -3342114 + AT_rich Low_complexity Low_complexity 1 48 0 231 125 0 0 chr5_random 436988 437028 -3341455 + (CAAAA)n Simple_repeat Simple_repeat 1 40 0 1882 215 41 12 chr5_random 438293 438707 -3339776 + MSTB LTR MaLR 1 426 0 2033 155 10 48 chr5_random 439167 439581 -3338902 - L1MB5 LINE L1 -8 6166 5769 392 173 129 2 chr5_random 439740 439844 -3338639 - MLT1C LTR MaLR -271 119 3 521 270 21 49 chr5_random 439848 440003 -3338480 - L1ME LINE L1 -5089 981 836 601 220 0 28 chr5_random 440003 440144 -3338339 + L1MB5 LINE L1 6021 6157 -17 521 270 21 49 chr5_random 440144 440273 -3338210 - L1ME LINE L1 -5234 836 705 1297 206 60 55 chr5_random 440524 440907 -3337576 + MLT1B LTR MaLR 4 388 -2 751 209 44 73 chr5_random 441328 441594 -3336889 - MLT1E2 LTR MaLR -207 298 21 23 33 0 0 chr5_random 441611 441641 -3336842 + AT_rich Low_complexity Low_complexity 1 30 0 2380 74 0 10 chr5_random 442156 442468 -3336015 + AluY SINE Alu 1 309 -2 1444 145 0 9 chr5_random 442853 443074 -3335409 + AluSg/x SINE Alu 87 305 -5 385 296 26 9 chr5_random 443074 443189 -3335294 + L2 LINE L2 3197 3313 0 29 47 0 0 chr5_random 444600 444643 -3333840 + AT_rich Low_complexity Low_complexity 1 43 0 666 247 44 78 chr5_random 445048 445344 -3333139 - LTR16A1 LTR ERVL -3 454 169 754 241 19 12 chr5_random 445750 445912 -3332571 - AluJo SINE Alu -66 246 84 1991 112 87 34 chr5_random 446273 446629 -3331854 + THE1C LTR MaLR 1 375 0 30 0 0 0 chr5_random 447216 447246 -3331237 + AT_rich Low_complexity Low_complexity 1 30 0 23 68 0 0 chr5_random 447960 448004 -3330479 + AT_rich Low_complexity Low_complexity 1 44 0 2310 109 3 49 chr5_random 448022 448262 -3330221 + THE1A LTR MaLR 1 220 -135 1967 153 3 0 chr5_random 448262 448557 -3329926 + AluSx SINE Alu 3 298 -14 2310 109 3 49 chr5_random 448557 448684 -3329799 + THE1A LTR MaLR 220 351 -4 11274 102 12 1 chr5_random 448687 450249 -3328234 + THE1A-int LTR MaLR 1 1580 0 2401 99 38 0 chr5_random 450249 450591 -3327892 + THE1A LTR MaLR 1 355 0 1181 178 34 67 chr5_random 450591 450860 -3327623 - AluJo SINE Alu -52 260 1 22 70 0 0 chr5_random 452087 452130 -3326353 + AT_rich Low_complexity Low_complexity 1 43 0 188 354 21 10 chr5_random 452168 452264 -3326219 - L2 LINE L2 -654 2660 2564 1354 142 16 12 chr5_random 453540 453793 -3324690 - L1MA5A LINE L1 0 6297 6044 546 341 12 36 chr5_random 455915 456167 -3322316 + L2 LINE L2 2599 2844 -470 203 323 146 10 chr5_random 456220 456316 -3322167 + L2 LINE L2 2925 3033 -239 1025 326 28 24 chr5_random 456647 457107 -3321376 - LTR33 LTR ERVL -41 480 19 22 35 0 0 chr5_random 457658 457687 -3320796 + AT_rich Low_complexity Low_complexity 1 29 0 730 204 14 0 chr5_random 458187 458334 -3320149 + FRAM SINE Alu 19 167 -9 290 353 102 26 chr5_random 459080 459383 -3319100 - L2 LINE L2 -778 2536 2211 261 118 176 0 chr5_random 459888 459939 -3318544 - LTR40b LTR ERVL -21 441 382 1534 166 68 28 chr5_random 460047 460373 -3318110 - MER44D DNA MER2_type 0 609 1 764 339 237 12 chr5_random 460456 461468 -3317015 + L2 LINE L2 1294 2533 -781 2066 191 28 34 chr5_random 461729 462196 -3316287 + MER31B LTR ERV1 1 464 -2 250 321 58 15 chr5_random 462381 462518 -3315965 + L2 LINE L2 3163 3305 -8 202 152 0 65 chr5_random 462545 462591 -3315892 + A-rich Low_complexity Low_complexity 6 48 0 2195 117 7 3 chr5_random 462801 463110 -3315373 + AluSx SINE Alu 1 310 -2 793 98 26 20 chr5_random 463684 463837 -3314646 + GA-rich Low_complexity Low_complexity 3 156 0 29 60 0 0 chr5_random 464470 464520 -3313963 + AT_rich Low_complexity Low_complexity 1 50 0 211 200 44 0 chr5_random 464954 464999 -3313484 - L2 LINE L2 0 3313 3267 255 133 0 0 chr5_random 465059 465104 -3313379 + (TG)n Simple_repeat Simple_repeat 2 46 0 298 313 36 0 chr5_random 466968 467080 -3311403 + MER20B DNA MER1_type 31 146 -637 751 266 200 7 chr5_random 467116 467541 -3310942 + MER20B DNA MER1_type 274 780 -3 203 220 17 85 chr5_random 467575 467634 -3310849 + MIR SINE MIR 17 71 -137 505 143 33 11 chr5_random 467855 467946 -3310537 + Tigger5 DNA MER2_type 2231 2323 0 1136 226 89 27 chr5_random 468230 468601 -3309882 - L1MD2 LINE L1 -355 6264 5871 1793 166 49 30 chr5_random 468663 469031 -3309452 + THE1C LTR MaLR 1 375 0 1444 111 5 5 chr5_random 469034 469251 -3309232 + THE1C-int LTR MaLR 4 220 -1360 769 133 0 8 chr5_random 469251 469371 -3309112 - L1MC1 LINE L1 -180 6153 6035 1761 228 122 16 chr5_random 469374 469571 -3308912 + MLT2B2 LTR ERVL 1 176 -339 880 118 0 13 chr5_random 469571 469723 -3308760 + (TTTC)n Simple_repeat Simple_repeat 1 150 0 1933 114 0 0 chr5_random 469723 469978 -3308505 - AluSx SINE Alu -40 272 18 1761 228 122 16 chr5_random 469978 470223 -3308260 + MLT2B2 LTR ERVL 175 491 -24 946 184 26 21 chr5_random 470344 470534 -3307949 - L1MD2 LINE L1 -760 5833 5643 * 1177 234 78 45 chr5_random 470527 471108 -3307375 - L1MD2 LINE L1 -4619 1787 1185 * 5048 160 32 13 chr5_random 471092 472390 -3306093 - L1PA15 LINE L1 -6 6159 4836 1933 203 23 25 chr5_random 472394 472876 -3305607 - L1MD2 LINE L1 -5183 1226 746 687 308 14 5 chr5_random 472930 473151 -3305332 + MLT1D-int LTR MaLR 661 883 -488 863 272 27 127 chr5_random 473250 473732 -3304751 + MLT1D-int LTR MaLR 938 1371 0 1358 237 112 51 chr5_random 473737 474209 -3304274 + MLT1D LTR MaLR 5 505 0 26 30 0 0 chr5_random 474350 474383 -3304100 + AT_rich Low_complexity Low_complexity 1 33 0 513 288 56 4 chr5_random 474497 474747 -3303736 - L1M4 LINE L1 -2662 3484 3222 403 212 26 18 chr5_random 474741 474854 -3303629 - L1M4 LINE L1 -1593 4553 4440 * 594 301 61 18 chr5_random 474856 475085 -3303398 + LTR40a LTR ERVL 1 239 -280 3253 201 26 3 chr5_random 475093 475699 -3302784 + L1M3f LINE L1 1240 1859 -4706 833 281 48 37 chr5_random 475682 476117 -3302366 + L1M3f LINE L1 3000 3439 -4126 * 378 244 130 8 chr5_random 478143 478266 -3300217 + MIR SINE MIR 5 142 -120 216 326 54 41 chr5_random 478463 478610 -3299873 + MIR SINE MIR 68 216 -46 31 0 0 0 chr5_random 478632 478663 -3299820 + AT_rich Low_complexity Low_complexity 1 31 0 767 343 47 36 chr5_random 479550 480023 -3298460 + HAL1 LINE L1 37 514 -1993 1296 214 0 30 chr5_random 480177 480472 -3298011 + AluJo SINE Alu 12 297 -15 391 319 30 24 chr5_random 480525 480691 -3297792 + HAL1 LINE L1 745 911 -1596 9281 177 91 41 chr5_random 480707 482760 -3295723 + L1MC1 LINE L1 21 2206 -4220 2291 116 0 0 chr5_random 482760 483070 -3295413 + AluSg SINE Alu 1 310 0 9281 177 91 41 chr5_random 483070 483359 -3295124 + L1MC1 LINE L1 2206 2479 -3947 2804 276 26 8 chr5_random 483398 484442 -3294041 + L1MC1 LINE L1 2566 3628 -2798 * 3097 245 21 39 chr5_random 484435 485573 -3292910 + L1MC1 LINE L1 4432 5530 -896 5421 185 21 9 chr5_random 485589 486651 -3291832 + L1MC1 LINE L1 5534 6607 -6 1890 114 14 7 chr5_random 486651 486932 -3291551 + AluSg1 SINE Alu 1 283 -26 28 29 0 0 chr5_random 486932 486967 -3291516 + AT_rich Low_complexity Low_complexity 1 35 0 586 248 124 31 chr5_random 487054 487377 -3291106 + HAL1 LINE L1 1243 1595 -912 21 0 0 0 chr5_random 487691 487712 -3290771 + AT_rich Low_complexity Low_complexity 1 21 0 756 252 132 39 chr5_random 487886 487901 -3290582 + HAL1 LINE L1 1971 1983 -524 1890 133 6 31 chr5_random 487901 488218 -3290265 + AluSq SINE Alu 1 309 -4 756 252 132 39 chr5_random 488218 488683 -3289800 + HAL1 LINE L1 1983 2493 -14 1175 266 31 37 chr5_random 488975 489329 -3289154 + MLT1A2 LTR MaLR 4 355 -19 25 31 0 0 chr5_random 490482 490514 -3287969 + AT_rich Low_complexity Low_complexity 1 32 0 22 35 0 0 chr5_random 490532 490561 -3287922 + AT_rich Low_complexity Low_complexity 1 29 0 21 36 0 0 chr5_random 490568 490596 -3287887 + AT_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr5_random 490840 490862 -3287621 + AT_rich Low_complexity Low_complexity 1 22 0 257 350 41 32 chr5_random 491421 491544 -3286939 - L2 LINE L2 -13 3300 3177 1315 68 78 21 chr5_random 491595 491786 -3286697 + AluY SINE Alu 1 202 -109 23 68 0 0 chr5_random 492624 492668 -3285815 + AT_rich Low_complexity Low_complexity 1 44 0 274 319 30 22 chr5_random 493201 493336 -3285147 - L2 LINE L2 -1213 2101 1966 683 237 29 29 chr5_random 493768 494013 -3284470 + L1MDa LINE L1 1860 2104 -4436 * 2632 263 81 14 chr5_random 494011 494692 -3283791 + L1MDa LINE L1 3164 3949 -2591 2325 100 0 3 chr5_random 494692 495002 -3283481 + AluSx SINE Alu 1 309 -3 2632 263 81 14 chr5_random 495002 495432 -3283051 + L1MDa LINE L1 3949 4349 -2191 183 114 0 0 chr5_random 496547 496582 -3281901 + (T)n Simple_repeat Simple_repeat 1 35 0 21 36 0 0 chr5_random 496819 496847 -3281636 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5_random 497857 497878 -3280605 + AT_rich Low_complexity Low_complexity 1 21 0 618 303 108 25 chr5_random 499175 499452 -3279031 + MLT1I LTR MaLR 1 300 -109 30 0 0 0 chr5_random 499802 499832 -3278651 + AT_rich Low_complexity Low_complexity 1 30 0 542 296 59 16 chr5_random 499974 500344 -3278139 - L1ME LINE L1 -523 5641 5254 398 358 37 54 chr5_random 500547 500952 -3277531 - LTR16C LTR ERVL -90 401 4 2310 164 39 33 chr5_random 500979 501343 -3277140 + LOR1b LTR ERV1 1 370 -91 2049 128 0 13 chr5_random 501343 501648 -3276835 + AluSx SINE Alu 3 303 -9 2310 164 39 33 chr5_random 501648 501741 -3276742 + LOR1b LTR ERV1 370 461 0 189 0 0 0 chr5_random 501770 501791 -3276692 + (T)n Simple_repeat Simple_repeat 1 21 0 242 233 0 0 chr5_random 502501 502544 -3275939 + MLT2E LTR ERVL 32 74 -554 1611 176 27 62 chr5_random 502702 503106 -3275377 - MLT1B LTR MaLR 0 390 1 1923 152 7 3 chr5_random 503211 503514 -3274969 - AluSx SINE Alu -7 305 2 1276 168 41 2 chr5_random 503703 503970 -3274513 - MLT1B LTR MaLR 0 390 58 537 101 0 0 chr5_random 503970 504049 -3274434 - MADE1 DNA Mariner 0 80 2 355 87 0 0 chr5_random 504056 504102 -3274381 - MLT1B LTR MaLR -340 50 5 266 106 21 0 chr5_random 504105 504152 -3274331 + (TCTA)n Simple_repeat Simple_repeat 1 48 0 235 280 28 47 chr5_random 504153 504260 -3274223 - L1MC4 LINE L1 -146 7896 7792 219 250 0 0 chr5_random 504265 504313 -3274170 + T-rich Low_complexity Low_complexity 3 50 0 431 146 7 26 chr5_random 504313 504463 -3274020 + CT-rich Low_complexity Low_complexity 1 147 0 1291 234 55 12 chr5_random 504468 504814 -3273669 - MLT1A1 LTR MaLR 0 365 5 470 271 6 71 chr5_random 505082 505118 -3273365 + MLT1E1 LTR MaLR 1 38 -616 1658 186 45 14 chr5_random 505118 505472 -3273011 - MLT1A1 LTR MaLR 0 365 1 470 271 6 71 chr5_random 505472 505605 -3272878 + MLT1E1 LTR MaLR 38 159 -495 * 588 279 46 82 chr5_random 505578 505954 -3272529 + MLT1E1 LTR MaLR 119 563 -91 1512 211 111 117 chr5_random 505957 506145 -3272338 + LTR1B LTR ERV1 1 189 -637 354 23 0 0 chr5_random 506145 506188 -3272295 + (CA)n Simple_repeat Simple_repeat 2 44 0 1512 211 111 117 chr5_random 506188 506830 -3271653 + LTR1B LTR ERV1 189 826 0 855 219 28 0 chr5_random 506856 507034 -3271449 - MSTD LTR MaLR 0 396 214 350 217 0 147 chr5_random 507380 507509 -3270974 - MSTD LTR MaLR -302 126 17 435 144 0 216 chr5_random 507572 507697 -3270786 - MSTC LTR MaLR -334 98 1 391 155 48 39 chr5_random 507697 507767 -3270716 + MLT1D LTR MaLR 435 505 0 779 224 23 6 chr5_random 507788 507962 -3270521 + MER20 DNA MER1_type 43 219 0 534 295 109 19 chr5_random 509363 509573 -3268910 - MIR SINE MIR -21 241 13 246 328 76 28 chr5_random 510023 510265 -3268218 - L1MEc LINE L1 -4320 2818 2558 534 103 0 0 chr5_random 510265 510343 -3268140 + (TAGA)n Simple_repeat Simple_repeat 4 81 0 246 328 76 28 chr5_random 510343 510390 -3268093 - L1MEc LINE L1 -4580 2558 2515 1523 175 20 18 chr5_random 510747 511077 -3267406 + MER61B LTR ERV1 1 425 0 1848 267 37 3 chr5_random 511077 511646 -3266837 - L1MEc LINE L1 -4696 2263 1676 528 216 72 8 chr5_random 511646 511771 -3266712 + FLAM_A SINE Alu 1 133 0 207 0 0 0 chr5_random 511798 511821 -3266662 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 346 181 26 35 chr5_random 511850 511966 -3266517 - L1MEc LINE L1 -5179 1680 1566 * 1331 213 38 3 chr5_random 511964 512255 -3266228 - L1MEc LINE L1 -5707 1152 852 1610 148 26 22 chr5_random 512255 512599 -3265884 - MER4A LTR ERV1 0 664 261 612 130 0 20 chr5_random 512599 512699 -3265784 - MER4A LTR ERV1 -566 98 1 658 264 41 14 chr5_random 512723 513279 -3265204 - L1MEc LINE L1 -6059 800 4 833 289 0 0 chr5_random 513565 513856 -3264627 - AluSc SINE Alu -3 306 16 189 0 0 0 chr5_random 513864 513885 -3264598 + (C)n Simple_repeat Simple_repeat 1 21 0 2256 100 0 0 chr5_random 514583 514874 -3263609 - AluSc SINE Alu -4 305 15 22 35 0 0 chr5_random 514960 514989 -3263494 + AT_rich Low_complexity Low_complexity 1 29 0 230 303 15 0 chr5_random 515087 515153 -3263330 - L2 LINE L2 0 3313 3247 421 381 88 16 chr5_random 515680 516113 -3262370 - L2 LINE L2 -667 2647 2184 1351 39 11 6 chr5_random 516848 517026 -3261457 + (TTTC)n Simple_repeat Simple_repeat 1 179 0 773 11 0 11 chr5_random 517138 517233 -3261250 + (TTTC)n Simple_repeat Simple_repeat 1 94 0 216 97 0 0 chr5_random 517669 517700 -3260783 + (CATATA)n Simple_repeat Simple_repeat 4 34 0 1665 167 7 20 chr5_random 518072 518371 -3260112 + AluJo SINE Alu 1 295 -17 26 0 0 0 chr5_random 519070 519096 -3259387 + AT_rich Low_complexity Low_complexity 1 26 0 24 67 0 0 chr5_random 519480 519525 -3258958 + AT_rich Low_complexity Low_complexity 1 45 0 1822 142 3 42 chr5_random 519529 519839 -3258644 - AluSx SINE Alu -14 298 1 209 309 95 56 chr5_random 521532 521658 -3256825 + MIR SINE MIR 18 148 -60 25 31 0 0 chr5_random 521723 521755 -3256728 + AT_rich Low_complexity Low_complexity 1 32 0 343 351 63 24 chr5_random 522301 522506 -3255977 + MIR SINE MIR 37 249 -13 432 0 0 0 chr5_random 523210 523258 -3255225 + (TG)n Simple_repeat Simple_repeat 2 49 0 2025 72 68 4 chr5_random 523299 523578 -3254905 - AluY SINE Alu -14 297 1 246 293 12 24 chr5_random 524681 524763 -3253720 + L2 LINE L2 3232 3312 -1 21 0 0 0 chr5_random 524879 524900 -3253583 + AT_rich Low_complexity Low_complexity 1 21 0 1053 216 0 18 chr5_random 527555 527777 -3250706 - AluJo SINE Alu -8 304 87 22 35 0 0 chr5_random 528039 528068 -3250415 + AT_rich Low_complexity Low_complexity 1 29 0 576 138 0 43 chr5_random 528099 528193 -3250290 + 5S rRNA rRNA 1 90 -31 604 321 118 23 chr5_random 528812 529161 -3249322 - MLT1I LTR MaLR -12 397 16 341 314 178 43 chr5_random 529183 529667 -3248816 - L1ME4a LINE L1 -226 5895 5347 26 30 0 0 chr5_random 529779 529812 -3248671 + AT_rich Low_complexity Low_complexity 1 33 0 3546 179 26 38 chr5_random 529895 529937 -3248546 + L1PA16 LINE L1 5437 5478 -688 2208 106 3 3 chr5_random 529937 530239 -3248244 - AluSp SINE Alu -11 302 1 3546 179 26 38 chr5_random 530239 530927 -3247556 + L1PA16 LINE L1 5478 6158 -8 338 280 70 38 chr5_random 531105 531291 -3247192 - L1M4 LINE L1 -3824 2322 2131 216 222 56 19 chr5_random 531671 531725 -3246758 - L2 LINE L2 -5 3308 3253 2077 134 45 31 chr5_random 532077 532436 -3246047 + THE1B LTR MaLR 1 364 0 282 281 54 48 chr5_random 534946 535113 -3243370 + MLT1J2 LTR MaLR 283 450 0 1071 219 19 5 chr5_random 535691 535901 -3242582 - MER58A DNA MER1_type -11 213 1 592 88 0 0 chr5_random 537089 537169 -3241314 + AluY SINE Alu 1 80 -230 322 83 17 0 chr5_random 537170 537230 -3241253 + L1PA6 LINE L1 6094 6154 0 1800 80 0 0 chr5_random 537234 537460 -3241023 + AluSg/x SINE Alu 80 305 -5 22 35 0 0 chr5_random 537890 537919 -3240564 + AT_rich Low_complexity Low_complexity 1 29 0 214 241 36 27 chr5_random 538580 538692 -3239791 + (CATATA)n Simple_repeat Simple_repeat 4 116 0 2169 126 0 13 chr5_random 538800 539110 -3239373 + AluSg SINE Alu 1 306 -4 418 313 27 7 chr5_random 540645 540795 -3237688 - MIR SINE MIR 0 262 110 783 262 13 31 chr5_random 541339 541564 -3236919 + MIR SINE MIR 41 261 -1 2080 98 7 3 chr5_random 543387 543672 -3234811 + AluSp SINE Alu 1 286 -27 406 125 39 10 chr5_random 543672 543770 -3234713 + (TA)n Simple_repeat Simple_repeat 2 102 0 21 82 0 0 chr5_random 544414 544463 -3234020 + AT_rich Low_complexity Low_complexity 1 49 0 369 236 158 0 chr5_random 545685 545812 -3232671 - MLT1J LTR MaLR -339 172 26 217 342 25 25 chr5_random 545958 546078 -3232405 + MIR3 SINE MIR 2 121 -87 2292 97 0 3 chr5_random 548866 549174 -3229309 + AluSc SINE Alu 3 309 0 412 365 116 31 chr5_random 549641 550055 -3228428 - L3 LINE CR1 -219 1358 910 188 246 9 27 chr5_random 550073 550183 -3228300 + CT-rich Low_complexity Low_complexity 4 111 0 225 94 0 0 chr5_random 550599 550631 -3227852 + (T)n Simple_repeat Simple_repeat 1 32 0 397 326 81 66 chr5_random 550645 551249 -3227234 - HAL1 LINE L1 -1053 1454 842 208 147 0 0 chr5_random 552192 552226 -3226257 + (TTTG)n Simple_repeat Simple_repeat 3 36 0 25 65 0 0 chr5_random 556022 556068 -3222415 + AT_rich Low_complexity Low_complexity 1 46 0 324 253 90 39 chr5_random 556331 556509 -3221974 + L1ME4a LINE L1 5930 6116 -5 24 67 0 0 chr5_random 558038 558083 -3220400 + AT_rich Low_complexity Low_complexity 1 45 0 2167 250 44 44 chr5_random 558334 559450 -3219033 - L1ME1 LINE L1 -55 6111 4997 2230 69 45 0 chr5_random 559450 559739 -3218744 - AluSc SINE Alu -7 302 1 2167 250 44 44 chr5_random 559739 559793 -3218690 - L1ME1 LINE L1 -1169 4997 4945 351 44 0 0 chr5_random 559793 559838 -3218645 + (TC)n Simple_repeat Simple_repeat 2 46 0 225 83 0 0 chr5_random 559838 559874 -3218609 + (TAGA)n Simple_repeat Simple_repeat 4 39 0 2167 250 44 44 chr5_random 559874 559969 -3218514 - L1ME1 LINE L1 -1220 4946 4848 310 242 0 74 chr5_random 560013 560108 -3218375 - L1MC4 LINE L1 -1343 6699 6612 347 277 43 11 chr5_random 560160 560254 -3218229 - L1ME1 LINE L1 -1302 4844 4748 4584 221 33 20 chr5_random 560272 561980 -3216503 - L1M3 LINE L1 -435 5748 4018 192 158 0 0 chr5_random 562525 562563 -3215920 + T-rich Low_complexity Low_complexity 1 38 0 2130 103 3 0 chr5_random 562987 563279 -3215204 - AluSc SINE Alu -16 293 1 180 77 0 0 chr5_random 563881 563907 -3214576 + (TTATA)n Simple_repeat Simple_repeat 2 27 0 33 25 0 0 chr5_random 563958 563998 -3214485 + AT_rich Low_complexity Low_complexity 1 40 0 216 158 0 0 chr5_random 564726 564764 -3213719 + CT-rich Low_complexity Low_complexity 3 40 0 199 359 146 24 chr5_random 565220 565432 -3213051 + MIR SINE MIR 19 256 -6 1786 154 13 19 chr5_random 565482 565694 -3212789 - Tigger3b DNA MER2_type -1798 1230 1018 2091 114 7 0 chr5_random 565694 566006 -3212477 + AluSg SINE Alu 1 314 0 1786 154 13 19 chr5_random 566006 566103 -3212380 - Tigger3b DNA MER2_type -2010 1018 922 1386 173 0 21 chr5_random 566103 566340 -3212143 - AluJo SINE Alu -80 232 1 3545 124 67 87 chr5_random 566340 567141 -3211342 - Tigger3b DNA MER2_type -445 786 2 330 132 0 0 chr5_random 567143 567196 -3211287 + (CA)n Simple_repeat Simple_repeat 2 54 0 325 219 14 14 chr5_random 567217 567290 -3211193 + Tigger5 DNA MER2_type 2250 2322 -1 519 187 11 0 chr5_random 567345 567436 -3211047 + Tigger5 DNA MER2_type 2231 2322 -1 447 19 0 0 chr5_random 567437 567489 -3210994 + (TG)n Simple_repeat Simple_repeat 1 52 0 1022 96 0 0 chr5_random 567509 567644 -3210839 - AluSx SINE Alu -155 157 23 2118 119 10 0 chr5_random 568087 568389 -3210094 - AluSx SINE Alu -7 305 1 228 135 0 0 chr5_random 568879 568916 -3209567 + (TA)n Simple_repeat Simple_repeat 2 38 0 2265 200 26 70 chr5_random 569806 570375 -3208108 - MER44D DNA MER2_type -6 599 1 318 331 49 14 chr5_random 570517 570659 -3207824 + MLT1K LTR MaLR 334 480 -108 23 33 0 0 chr5_random 571186 571216 -3207267 + AT_rich Low_complexity Low_complexity 1 30 0 22 80 0 0 chr5_random 571554 571604 -3206879 + AT_rich Low_complexity Low_complexity 1 50 0 217 246 0 0 chr5_random 572085 572142 -3206341 + T-rich Low_complexity Low_complexity 1 57 0 274 253 75 41 chr5_random 572915 573061 -3205422 + MER103 DNA DNA 6 156 -10 22 35 0 0 chr5_random 573377 573406 -3205077 + AT_rich Low_complexity Low_complexity 1 29 0 542 217 19 0 chr5_random 573729 573835 -3204648 + MSTC LTR MaLR 1 108 -320 2737 153 32 20 chr5_random 573850 574387 -3204096 - L1MA7 LINE L1 -2 6289 5747 3127 195 8 14 chr5_random 574394 575041 -3203442 - L1MA7 LINE L1 -909 5237 4595 215 169 28 56 chr5_random 575151 575222 -3203261 + (TTTA)n Simple_repeat Simple_repeat 3 71 0 27 0 0 0 chr5_random 576698 576725 -3201758 + AT_rich Low_complexity Low_complexity 1 27 0 1828 194 25 19 chr5_random 576966 577327 -3201156 + MLT1A1 LTR MaLR 3 365 0 222 91 0 0 chr5_random 577360 577393 -3201090 + (TTTTC)n Simple_repeat Simple_repeat 2 34 0 2923 107 137 77 chr5_random 577496 577750 -3200733 + MER4A LTR ERV1 1 238 -426 4673 82 61 6 chr5_random 577750 578434 -3200049 - LTR30 LTR ERV1 0 722 1 2923 107 137 77 chr5_random 578434 578805 -3199678 + MER4A LTR ERV1 238 664 0 198 171 0 0 chr5_random 578971 579012 -3199471 + T-rich Low_complexity Low_complexity 1 41 0 539 358 26 18 chr5_random 579456 579685 -3198798 - MIR SINE MIR -30 232 2 26 0 0 0 chr5_random 580406 580432 -3198051 + AT_rich Low_complexity Low_complexity 1 26 0 327 25 0 0 chr5_random 580493 580533 -3197950 + (TA)n Simple_repeat Simple_repeat 2 41 0 265 171 87 0 chr5_random 581030 581096 -3197387 + MER58 DNA MER1_type 46 106 -109 2788 302 65 37 chr5_random 581175 582765 -3195718 + L1PA15-16 LINE L1 1 1623 -5227 * 5128 189 57 32 chr5_random 582747 583907 -3194576 + L1PBb LINE L1 15 1145 -5059 306 0 0 0 chr5_random 583907 583941 -3194542 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 1965 50 69 11 chr5_random 583943 584204 -3194279 - AluY SINE Alu -31 280 5 5128 189 57 32 chr5_random 584204 585023 -3193460 + L1PBb LINE L1 1145 2041 -4163 7119 235 35 15 chr5_random 585026 587433 -3191050 - L1PA15-16 LINE L1 -1508 5341 2903 1357 191 19 27 chr5_random 587433 587695 -3190788 - AluJb SINE Alu -52 260 1 2921 259 28 18 chr5_random 587695 588639 -3189844 - L1PA15-16 LINE L1 -3956 2893 1941 1554 157 21 11 chr5_random 588652 588938 -3189545 + L1PB3 LINE L1 5866 6154 0 22 0 0 0 chr5_random 589495 589517 -3188966 + AT_rich Low_complexity Low_complexity 1 22 0 9837 71 39 12 chr5_random 590712 592061 -3186422 - SVA Other Other 0 1386 2 222 37 0 0 chr5_random 592062 592089 -3186394 + (AGGGGG)n Simple_repeat Simple_repeat 3 29 0 21 0 0 0 chr5_random 593022 593043 -3185440 + AT_rich Low_complexity Low_complexity 1 21 0 2559 211 45 30 chr5_random 593255 593895 -3184588 + L1MA10 LINE L1 5668 6317 -17 700 202 107 23 chr5_random 593895 594157 -3184326 + Charlie5 DNA MER1_type 2222 2505 -107 862 258 17 19 chr5_random 594500 594848 -3183635 + MER101B LTR ERV1 1 419 -55 4711 35 0 2 chr5_random 595180 595932 -3182551 - L1PA4 LINE L1 -585 5570 4820 4923 36 0 0 chr5_random 595932 596513 -3181970 + L1PA4 LINE L1 5570 6152 -3 348 43 0 0 chr5_random 597494 597540 -3180943 + (CA)n Simple_repeat Simple_repeat 2 47 0 246 282 13 13 chr5_random 598613 598691 -3179792 + GA-rich Low_complexity Low_complexity 1 78 0 226 200 22 0 chr5_random 598945 598990 -3179493 + MLT1K LTR MaLR 522 567 -21 27 73 0 0 chr5_random 600765 600820 -3177663 + AT_rich Low_complexity Low_complexity 1 55 0 4959 140 66 43 chr5_random 600935 601894 -3176589 + Tigger1 DNA MER2_type 1438 2418 0 25 0 0 0 chr5_random 602247 602272 -3176211 + AT_rich Low_complexity Low_complexity 1 25 0 28 29 0 0 chr5_random 602774 602809 -3175674 + AT_rich Low_complexity Low_complexity 1 35 0 635 311 52 8 chr5_random 603119 603370 -3175113 - LTR16B LTR ERVL -138 326 65 265 193 25 50 chr5_random 603441 603560 -3174923 + (TTTA)n Simple_repeat Simple_repeat 4 119 0 248 220 34 0 chr5_random 603582 603641 -3174842 + (TATG)n Simple_repeat Simple_repeat 3 63 0 947 148 85 32 chr5_random 603651 603840 -3174643 - AluJo SINE Alu -21 291 93 10444 236 94 99 chr5_random 603851 606929 -3171554 - MER66B-int LTR ERV1 -570 6106 3071 1829 147 38 3 chr5_random 606929 607222 -3171261 + AluSx SINE Alu 1 303 -9 10444 236 94 99 chr5_random 607222 610033 -3168450 - MER66B-int LTR ERV1 -3605 3071 247 690 180 41 0 chr5_random 610034 610156 -3168327 - FLAM_C SINE Alu -16 127 1 632 245 28 56 chr5_random 610160 610409 -3168074 - MER66B-int LTR ERV1 -6424 252 11 2015 152 46 3 chr5_random 610412 610761 -3167722 + THE1B LTR MaLR 1 364 0 9643 132 49 1 chr5_random 610761 612264 -3166219 + THE1B-int LTR MaLR 1 1574 -6 2174 142 34 3 chr5_random 612271 612623 -3165860 + THE1B LTR MaLR 2 364 0 253 143 24 0 chr5_random 612636 612678 -3165805 - MER66B LTR ERV1 0 486 444 * 1917 158 32 26 chr5_random 612672 613020 -3165463 - THE1B LTR MaLR -14 350 1 * 2126 187 12 8 chr5_random 613020 613418 -3165065 - MER66B LTR ERV1 -59 427 28 381 258 144 0 chr5_random 613503 613635 -3164848 - L1M4 LINE L1 -2929 3217 3067 1954 150 47 8 chr5_random 615307 615668 -3162815 + THE1C LTR MaLR 1 375 0 383 0 21 0 chr5_random 616603 616650 -3161833 + (TAGA)n Simple_repeat Simple_repeat 1 48 0 435 268 78 26 chr5_random 616858 617011 -3161472 - MER5B DNA MER1_type -17 161 1 210 191 0 0 chr5_random 617341 617388 -3161095 + (TCTA)n Simple_repeat Simple_repeat 2 48 0 27 62 0 0 chr5_random 617428 617476 -3161007 + AT_rich Low_complexity Low_complexity 1 48 0 237 240 142 66 chr5_random 617819 618002 -3160481 - L1ME3A LINE L1 -15 6155 5959 297 269 172 0 chr5_random 618428 618562 -3159921 + MLT1H1 LTR MaLR 399 555 0 1978 158 7 0 chr5_random 618727 619037 -3159446 + AluSx SINE Alu 1 312 0 353 94 250 0 chr5_random 619166 619230 -3159253 + MADE1 DNA Mariner 1 80 0 1025 281 58 6 chr5_random 619597 619910 -3158573 - MER93a LTR ERV1 0 402 74 259 290 72 57 chr5_random 620365 620558 -3157925 + MLT1-int LTR MaLR 1175 1370 -1 24 0 0 0 chr5_random 621131 621155 -3157328 + AT_rich Low_complexity Low_complexity 1 24 0 243 333 81 0 chr5_random 621466 621577 -3156906 - L2 LINE L2 -505 2809 2690 433 345 132 7 chr5_random 621653 622049 -3156434 - L2 LINE L2 -1027 2287 1784 27 29 0 0 chr5_random 622654 622688 -3155795 + AT_rich Low_complexity Low_complexity 1 34 0 273 299 15 41 chr5_random 622877 623074 -3155409 - L1ME3A LINE L1 -1928 5880 5689 209 145 65 0 chr5_random 623277 623339 -3155144 + (TA)n Simple_repeat Simple_repeat 1 66 0 28 48 0 0 chr5_random 623424 623466 -3155017 + AT_rich Low_complexity Low_complexity 1 42 0 24 32 0 0 chr5_random 623886 623917 -3154566 + AT_rich Low_complexity Low_complexity 1 31 0 180 152 0 0 chr5_random 625444 625477 -3153006 + (TATATG)n Simple_repeat Simple_repeat 4 36 0 367 310 33 5 chr5_random 625482 625666 -3152817 + L1ME LINE L1 5586 5774 -347 217 122 20 41 chr5_random 626157 626206 -3152277 + GA-rich Low_complexity Low_complexity 1 48 0 390 91 0 0 chr5_random 626351 626406 -3152077 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 1829 149 0 7 chr5_random 626415 626690 -3151793 - AluSx SINE Alu -39 273 1 21 0 0 0 chr5_random 626834 626855 -3151628 + AT_rich Low_complexity Low_complexity 1 21 0 324 340 29 24 chr5_random 627642 627848 -3150635 + MIR SINE MIR 52 258 -4 24 53 0 0 chr5_random 628115 628153 -3150330 + AT_rich Low_complexity Low_complexity 1 38 0 546 271 27 13 chr5_random 628427 628652 -3149831 + L1ME2 LINE L1 2166 2393 -4003 1387 174 14 29 chr5_random 628653 628934 -3149549 + AluJo SINE Alu 1 277 -35 324 0 0 0 chr5_random 628938 628974 -3149509 + (TAAA)n Simple_repeat Simple_repeat 1 36 0 298 305 0 0 chr5_random 629015 629120 -3149363 + L1ME2 LINE L1 2374 2478 -3737 24 0 0 0 chr5_random 629162 629186 -3149297 + AT_rich Low_complexity Low_complexity 1 24 0 2712 135 8 23 chr5_random 629193 629666 -3148817 - L1PB2 LINE L1 -3 6148 5683 339 269 0 0 chr5_random 629703 629796 -3148687 + L1ME2 LINE L1 2520 2612 -3603 2093 237 35 68 chr5_random 629857 630078 -3148405 + L1ME2 LINE L1 5384 5611 -622 527 0 16 0 chr5_random 630078 630141 -3148342 + (TAGA)n Simple_repeat Simple_repeat 3 66 0 2093 237 35 68 chr5_random 630141 630688 -3147795 + L1ME2 LINE L1 5611 6127 -106 27 0 0 0 chr5_random 631043 631070 -3147413 + AT_rich Low_complexity Low_complexity 1 27 0 23 33 0 0 chr5_random 631980 632010 -3146473 + AT_rich Low_complexity Low_complexity 1 30 0 25 31 0 0 chr5_random 632565 632597 -3145886 + AT_rich Low_complexity Low_complexity 1 32 0 516 237 0 0 chr5_random 633316 633413 -3145070 + MER63A DNA MER1_type 77 173 -37 304 123 46 39 chr5_random 634190 634320 -3144163 + (TTATA)n Simple_repeat Simple_repeat 1 131 0 240 149 0 0 chr5_random 634410 634457 -3144026 + (TA)n Simple_repeat Simple_repeat 2 48 0 2175 100 17 0 chr5_random 634652 634943 -3143540 - AluSg SINE Alu -14 296 1 2376 68 0 0 chr5_random 636748 637041 -3141442 + AluY SINE Alu 1 293 -18 189 333 70 23 chr5_random 640510 640639 -3137844 + MIR SINE MIR 84 218 -44 2020 128 40 0 chr5_random 640927 641223 -3137260 - AluSg1 SINE Alu -1 308 1 204 40 0 0 chr5_random 642085 642110 -3136373 + (CA)n Simple_repeat Simple_repeat 2 26 0 21 0 0 0 chr5_random 642531 642552 -3135931 + AT_rich Low_complexity Low_complexity 1 21 0 240 35 0 0 chr5_random 643854 643883 -3134600 + (TTCA)n Simple_repeat Simple_repeat 2 30 0 441 314 34 92 chr5_random 643907 644232 -3134251 - L2 LINE L2 -20 3293 2988 193 116 23 23 chr5_random 644307 644350 -3134133 + CT-rich Low_complexity Low_complexity 4 46 0 568 292 34 34 chr5_random 644513 644722 -3133761 - L2 LINE L2 -619 2695 2487 228 323 32 0 chr5_random 644742 644835 -3133648 + MER34 LTR ERV1 1 96 -446 2138 189 35 31 chr5_random 644842 644991 -3133492 + LTR29 LTR ERV1 137 284 -338 1381 188 42 39 chr5_random 644991 645299 -3133184 + AluJb SINE Alu 3 311 -1 2138 189 35 31 chr5_random 645299 645631 -3132852 + LTR29 LTR ERV1 284 620 -2 552 329 59 52 chr5_random 645636 645922 -3132561 - L2 LINE L2 -872 2442 2155 1843 145 7 7 chr5_random 646008 646298 -3132185 + AluSx SINE Alu 1 290 -22 1581 187 67 156 chr5_random 646469 647082 -3131401 + LTR8A LTR ERV1 1 540 -187 3392 82 19 4 chr5_random 647082 647559 -3130924 + LTR19A LTR ERV1 3 486 0 1581 187 67 156 chr5_random 647559 647677 -3130806 + LTR8A LTR ERV1 540 667 -60 207 0 0 0 chr5_random 647677 647700 -3130783 + (T)n Simple_repeat Simple_repeat 1 23 0 2327 128 57 25 chr5_random 647866 648302 -3130181 - LTR7 LTR ERV1 0 450 1 414 324 147 23 chr5_random 648453 648712 -3129771 - HAL1 LINE L1 -1071 1436 1146 2744 178 95 43 chr5_random 648771 649305 -3129178 - LTR48 LTR ERV1 0 787 202 2210 102 3 0 chr5_random 649305 649610 -3128873 - AluSg SINE Alu -4 306 1 2744 178 95 43 chr5_random 649610 649821 -3128662 - LTR48 LTR ERV1 -585 202 3 1418 217 49 61 chr5_random 649927 650453 -3128030 - LTR48-int LTR ERV1 -158 6173 5654 253 171 300 0 chr5_random 650471 650541 -3127942 - LTR37A LTR ERV1 -332 94 4 616 200 72 6 chr5_random 650541 650721 -3127762 - LTR48-int LTR ERV1 -771 5560 5369 721 192 0 0 chr5_random 650759 650884 -3127599 - AluSq/x SINE Alu -188 125 1 903 218 58 46 chr5_random 650884 651145 -3127338 - LTR48-int LTR ERV1 -947 5384 5121 24 0 0 0 chr5_random 651673 651697 -3126786 + AT_rich Low_complexity Low_complexity 1 24 0 269 193 133 12 chr5_random 651816 651899 -3126584 - L1MC5 LINE L1 -348 7613 7521 235 250 14 71 chr5_random 651982 652122 -3126361 - L1MC5 LINE L1 -465 7496 7365 592 247 99 69 chr5_random 652179 652511 -3125972 - L1MC5 LINE L1 -727 7234 6893 35 88 0 0 chr5_random 652578 652669 -3125814 + AT_rich Low_complexity Low_complexity 1 91 0 3650 172 30 2 chr5_random 652669 653310 -3125173 - MSTA-int LTR MaLR -992 659 1 1442 153 105 16 chr5_random 653311 653611 -3124872 - MSTA LTR MaLR -83 349 1 255 302 101 49 chr5_random 653896 654482 -3124001 + L1MC/D LINE L1 2894 3525 -2621 297 89 0 0 chr5_random 654482 654527 -3123956 + (CA)n Simple_repeat Simple_repeat 1 45 0 255 302 101 49 chr5_random 654527 654652 -3123831 + L1MC/D LINE L1 3525 3642 -2504 387 0 0 0 chr5_random 655884 655927 -3122556 + (TG)n Simple_repeat Simple_repeat 1 43 0 492 254 58 0 chr5_random 656125 656263 -3122220 - LTR16A LTR ERVL -77 373 228 357 328 16 0 chr5_random 656522 656644 -3121839 + L1MC/D LINE L1 4817 4940 -1206 443 287 7 0 chr5_random 656683 656833 -3121650 + L1MC/D LINE L1 5655 5805 -2003 241 182 0 0 chr5_random 656872 656916 -3121567 - Alu SINE Alu -258 44 1 23 54 0 0 chr5_random 657166 657203 -3121280 + AT_rich Low_complexity Low_complexity 1 37 0 1698 180 3 3 chr5_random 657286 657586 -3120897 + AluJb SINE Alu 1 300 -12 458 252 145 51 chr5_random 657705 657939 -3120544 - MIR SINE MIR 0 262 7 421 358 65 7 chr5_random 657974 658284 -3120199 + L1ME4a LINE L1 4613 4940 -1206 195 290 32 0 chr5_random 659031 659093 -3119390 - L3 LINE CR1 -1101 476 413 23 0 0 0 chr5_random 659944 659967 -3118516 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5_random 660250 660271 -3118212 + AT_rich Low_complexity Low_complexity 1 21 0 1936 142 3 3 chr5_random 660513 660808 -3117675 - AluJb SINE Alu -17 295 1 23 33 0 0 chr5_random 660966 660996 -3117487 + AT_rich Low_complexity Low_complexity 1 30 0 237 65 0 0 chr5_random 661033 661064 -3117419 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 413 353 73 7 chr5_random 661828 662114 -3116369 + L1ME4a LINE L1 5658 5962 -159 1826 183 9 3 chr5_random 662262 662601 -3115882 - MER47A DNA MER2_type -1 365 25 216 0 0 0 chr5_random 664107 664131 -3114352 + (TAAA)n Simple_repeat Simple_repeat 3 26 0 751 233 37 11 chr5_random 664367 664556 -3113927 - MIR SINE MIR -68 194 1 301 269 42 50 chr5_random 664598 664717 -3113766 + MIR SINE MIR 37 154 -108 387 41 0 0 chr5_random 664879 664928 -3113555 + (TC)n Simple_repeat Simple_repeat 2 50 0 1451 184 77 0 chr5_random 664934 665195 -3113288 - AluJb SINE Alu -31 281 1 369 0 0 0 chr5_random 666286 666327 -3112156 + (CATATA)n Simple_repeat Simple_repeat 2 42 0 1992 127 3 22 chr5_random 667743 668058 -3110425 - AluSx SINE Alu -3 309 1 368 234 81 8 chr5_random 668784 668908 -3109575 + MER58B DNA MER1_type 27 159 -182 580 218 131 10 chr5_random 668911 669117 -3109366 - L1M4 LINE L1 -1293 4853 4623 2076 131 0 0 chr5_random 669306 669603 -3108880 - AluSx SINE Alu -15 297 1 22 0 0 0 chr5_random 670149 670171 -3108312 + AT_rich Low_complexity Low_complexity 1 22 0 245 297 35 57 chr5_random 671655 671884 -3106599 - L1M4 LINE L1 -1546 4600 4377 22 0 0 0 chr5_random 672083 672105 -3106378 + AT_rich Low_complexity Low_complexity 1 22 0 229 289 29 10 chr5_random 672158 672262 -3106221 - L1M4 LINE L1 -2098 4048 3943 843 222 28 0 chr5_random 672613 672789 -3105694 - MER58B DNA MER1_type 0 341 161 5605 227 84 42 chr5_random 672789 673531 -3104952 + L1M4 LINE L1 2488 3197 -2949 1949 111 17 14 chr5_random 673531 673820 -3104663 + AluSx SINE Alu 1 290 -22 5605 227 84 42 chr5_random 673820 674828 -3103655 + L1M4 LINE L1 3197 4347 -1799 300 102 0 0 chr5_random 674828 674877 -3103606 + (CA)n Simple_repeat Simple_repeat 2 50 0 5605 227 84 42 chr5_random 674877 675258 -3103225 + L1M4 LINE L1 4347 4710 -1436 29 47 0 0 chr5_random 675513 675556 -3102927 + AT_rich Low_complexity Low_complexity 1 43 0 22 70 0 0 chr5_random 675604 675647 -3102836 + AT_rich Low_complexity Low_complexity 1 43 0 36 23 0 0 chr5_random 675985 676028 -3102455 + AT_rich Low_complexity Low_complexity 1 43 0 2209 79 0 7 chr5_random 678698 678977 -3099506 + AluY SINE Alu 1 277 -34 351 0 0 0 chr5_random 678977 679016 -3099467 + (TC)n Simple_repeat Simple_repeat 2 40 0 518 183 9 0 chr5_random 679016 679131 -3099352 + (TA)n Simple_repeat Simple_repeat 2 117 0 181 140 0 40 chr5_random 679139 679189 -3099294 + (TCTCCC)n Simple_repeat Simple_repeat 6 53 0 486 0 0 0 chr5_random 681165 681219 -3097264 + (TA)n Simple_repeat Simple_repeat 1 54 0 2686 44 0 12 chr5_random 681219 681557 -3096926 - L1PA4 LINE L1 -19 6136 5803 3311 125 8 8 chr5_random 681635 682148 -3096335 - MER75 DNA T2_type 0 514 2 246 301 41 0 chr5_random 682152 682225 -3096258 - L2 LINE L2 -8 3264 3189 243 125 0 0 chr5_random 682322 682362 -3096121 + (A)n Simple_repeat Simple_repeat 1 40 0 849 212 0 0 chr5_random 682859 683010 -3095473 - MER58A DNA MER1_type 0 152 2 296 331 94 31 chr5_random 683464 683718 -3094765 - MLT1J LTR MaLR 0 511 242 258 220 231 0 chr5_random 685101 685192 -3093291 - L1MD3 LINE L1 -18 7977 7866 3677 166 33 6 chr5_random 685202 685864 -3092619 + Tigger1 DNA MER2_type 26 705 -1713 2285 169 47 32 chr5_random 685864 686336 -3092147 - MER66B LTR ERV1 0 486 8 3226 143 2 42 chr5_random 686343 686894 -3091589 - MER66B-int LTR ERV1 0 6676 6148 1869 138 70 62 chr5_random 686901 687257 -3091226 + THE1B LTR MaLR 6 364 0 10927 117 16 0 chr5_random 687285 688828 -3089655 + THE1B-int LTR MaLR 13 1580 0 2162 132 48 25 chr5_random 688828 689184 -3089299 + THE1B LTR MaLR 1 364 0 546 300 80 0 chr5_random 689386 689536 -3088947 - MER66B-int LTR ERV1 -3574 3102 2941 1648 203 86 17 chr5_random 689614 690380 -3088103 - MER66B-int LTR ERV1 -5586 1090 197 1688 152 181 11 chr5_random 690680 691028 -3087455 - MSTA LTR MaLR -21 407 1 2288 184 26 42 chr5_random 691038 691532 -3086951 - MER66B LTR ERV1 0 486 1 10103 137 30 2 chr5_random 691532 692683 -3085800 + Tigger1 DNA MER2_type 702 1916 -502 2431 93 0 3 chr5_random 692683 692995 -3085488 + AluY SINE Alu 1 311 0 10103 137 30 2 chr5_random 692995 693510 -3084973 + Tigger1 DNA MER2_type 1916 2415 -3 3522 235 43 62 chr5_random 693560 693674 -3084809 - L1MC4a LINE L1 -196 7612 7497 1140 158 195 16 chr5_random 693674 693920 -3084563 - AluJb SINE Alu -12 290 1 3522 235 43 62 chr5_random 693920 695057 -3083426 - L1MC4a LINE L1 -311 7497 6385 22 35 0 0 chr5_random 696361 696390 -3082093 + AT_rich Low_complexity Low_complexity 1 29 0 183 283 19 0 chr5_random 696478 696531 -3081952 - L2 LINE L2 -4 3309 3256 24 0 0 0 chr5_random 697027 697051 -3081432 + AT_rich Low_complexity Low_complexity 1 24 0 466 284 121 26 chr5_random 697055 697287 -3081196 - MIR SINE MIR -8 254 1 194 194 16 0 chr5_random 697465 697527 -3080956 + CT-rich Low_complexity Low_complexity 3 65 0 180 179 0 0 chr5_random 697882 697921 -3080562 + (TG)n Simple_repeat Simple_repeat 2 40 0 2161 106 3 3 chr5_random 699646 699928 -3078555 + AluSc SINE Alu 1 282 -27 429 131 28 0 chr5_random 699928 700035 -3078448 + (TA)n Simple_repeat Simple_repeat 1 110 0 741 215 67 5 chr5_random 700356 700565 -3077918 + MER33 DNA MER1_type 3 224 -100 24 0 0 0 chr5_random 700617 700641 -3077842 + AT_rich Low_complexity Low_complexity 1 24 0 8451 198 6 25 chr5_random 700842 702659 -3075824 + L1PA15 LINE L1 3501 5283 -863 2810 156 0 2 chr5_random 702653 703102 -3075381 + L1PA15 LINE L1 5590 6037 -128 * 6144 115 50 10 chr5_random 703109 703329 -3075154 + L1MA2 LINE L1 5255 5465 -839 2183 103 0 3 chr5_random 703329 703621 -3074862 + AluSg SINE Alu 1 291 -19 6144 115 50 10 chr5_random 703621 704409 -3074074 + L1MA2 LINE L1 5465 6304 0 785 125 52 0 chr5_random 704438 704574 -3073909 + L1PA15 LINE L1 6023 6165 0 1747 171 41 38 chr5_random 704840 705209 -3073274 + THE1C LTR MaLR 1 370 -5 1178 226 105 74 chr5_random 706013 706469 -3072014 - LTR1B LTR ERV1 -18 1002 332 739 231 16 11 chr5_random 706495 706677 -3071806 - LTR1 LTR ERV1 -601 184 2 27 49 0 0 chr5_random 707090 707131 -3071352 + AT_rich Low_complexity Low_complexity 1 41 0 408 154 71 12 chr5_random 707131 707300 -3071183 + (TA)n Simple_repeat Simple_repeat 2 180 0 32 26 0 0 chr5_random 707302 707341 -3071142 + AT_rich Low_complexity Low_complexity 1 39 0 27 29 0 0 chr5_random 707948 707982 -3070501 + AT_rich Low_complexity Low_complexity 1 34 0 24 0 0 0 chr5_random 708319 708343 -3070140 + AT_rich Low_complexity Low_complexity 1 24 0 388 273 33 16 chr5_random 710027 710148 -3068335 - MER76 LTR ERV -54 634 512 920 263 55 52 chr5_random 710184 710530 -3067953 - MER76 LTR ERV -341 347 1 346 304 38 19 chr5_random 710869 711027 -3067456 + L1MEd LINE L1 12 172 -5947 210 301 0 39 chr5_random 711030 711133 -3067350 + GA-rich Low_complexity Low_complexity 3 101 0 1228 230 45 6 chr5_random 711214 711544 -3066939 - L1MC3 LINE L1 -78 7707 7365 363 326 62 62 chr5_random 711578 712161 -3066322 + L1MEd LINE L1 268 850 -5269 542 244 23 0 chr5_random 712677 712808 -3065675 + LTR52 LTR ERVL 286 419 -2 430 282 84 39 chr5_random 713018 713327 -3065156 + L1ME LINE L1 5316 5638 -532 184 315 55 0 chr5_random 713682 713755 -3064728 + MIR SINE MIR 173 249 -13 627 311 127 0 chr5_random 715554 715782 -3062701 + LTR16B LTR ERVL 3 259 -205 184 379 23 11 chr5_random 716097 716184 -3062299 - L2 LINE L2 -3 3269 3182 351 313 103 45 chr5_random 716560 716958 -3061525 - L1M4 LINE L1 -3185 2961 2511 2183 109 7 0 chr5_random 716958 717251 -3061232 - AluSx SINE Alu -17 295 1 351 313 103 45 chr5_random 717251 717481 -3061002 - L1M4 LINE L1 -3635 2511 2296 648 279 18 51 chr5_random 717483 717891 -3060592 + L1M4 LINE L1 4376 4771 -1375 21 0 0 0 chr5_random 718115 718136 -3060347 + AT_rich Low_complexity Low_complexity 1 21 0 355 277 10 87 chr5_random 718242 718448 -3060035 + L1M4 LINE L1 3841 4030 -2116 708 167 0 0 chr5_random 720728 720842 -3057641 + AluJb SINE Alu 4 117 -195 214 28 28 28 chr5_random 720842 720878 -3057605 + (TAAA)n Simple_repeat Simple_repeat 4 39 0 433 246 20 115 chr5_random 720890 721134 -3057349 - L1MA10 LINE L1 -35 6289 5909 1394 181 148 0 chr5_random 721188 721498 -3056985 + MER47A DNA MER2_type 5 360 -6 504 138 25 12 chr5_random 721524 721604 -3056879 - MSTD LTR MaLR -315 81 1 3775 271 75 35 chr5_random 721613 723605 -3054878 - L1M4 LINE L1 -838 5308 3236 266 200 71 35 chr5_random 723617 723702 -3054781 - MER58C DNA MER1_type -15 200 113 1176 299 75 58 chr5_random 723791 724416 -3054067 + L1PA13 LINE L1 788 1423 -6151 303 337 0 0 chr5_random 724496 724594 -3053889 + L1PA13 LINE L1 2084 2181 -5400 372 317 24 24 chr5_random 724827 724991 -3053492 + L1PA13 LINE L1 2179 2342 -5239 * 12192 192 56 9 chr5_random 724985 730050 -3048433 - L1PA12 LINE L1 -2009 5575 1 1468 253 35 37 chr5_random 730055 730683 -3047800 - L1MEc LINE L1 -4101 2295 1669 504 307 74 0 chr5_random 730684 730847 -3047636 + MER96 DNA MER1_type? 1 175 0 6237 192 30 1 chr5_random 730881 730970 -3047513 - L1ME LINE L1 -546 5575 5490 188 67 33 0 chr5_random 730970 731000 -3047483 + (TTA)n Simple_repeat Simple_repeat 2 32 0 6237 192 30 1 chr5_random 731000 732398 -3046085 - L1ME LINE L1 -631 5490 4060 1773 69 0 0 chr5_random 732400 732632 -3045851 + L1P5 LINE L1 5560 5791 -360 283 244 47 0 chr5_random 732659 732745 -3045738 - L1MC4 LINE L1 -1339 6703 6614 2315 97 3 0 chr5_random 732775 733095 -3045388 + L1PB1 LINE L1 5830 6150 -1 3185 239 75 15 chr5_random 733117 735051 -3043432 - L1MD2 LINE L1 -24 6404 4272 423 0 0 0 chr5_random 735051 735098 -3043385 + (TG)n Simple_repeat Simple_repeat 2 48 0 3185 239 75 15 chr5_random 735098 735437 -3043046 - L1MD2 LINE L1 -2156 4272 3955 483 239 0 18 chr5_random 735458 735571 -3042912 - L1MA10 LINE L1 0 6334 6224 2274 280 103 41 chr5_random 735579 737268 -3041215 - L1MD2 LINE L1 -2268 3947 54 21 0 0 0 chr5_random 737618 737639 -3040844 + AT_rich Low_complexity Low_complexity 1 21 0 293 261 60 15 chr5_random 737650 737784 -3040699 + L1ME4a LINE L1 5582 5721 -400 243 304 56 8 chr5_random 737985 738110 -3040373 + L1ME4a LINE L1 5986 6116 -5 24 0 0 0 chr5_random 738163 738187 -3040296 + AT_rich Low_complexity Low_complexity 1 24 0 402 211 0 0 chr5_random 738523 738627 -3039856 + (TA)n Simple_repeat Simple_repeat 1 104 0 1644 188 5 50 chr5_random 738645 739005 -3039478 - MLT2C1 LTR ERVL -48 416 8 1524 247 43 45 chr5_random 739340 739609 -3038874 - MLT1D LTR MaLR -12 493 224 1620 157 67 27 chr5_random 739609 739909 -3038574 - AluJb SINE Alu 0 312 1 1524 247 43 45 chr5_random 739909 740129 -3038354 - MLT1D LTR MaLR -281 224 5 274 291 153 74 chr5_random 740283 740551 -3037932 + HAL1 LINE L1 553 798 -1709 759 169 28 0 chr5_random 740551 740693 -3037790 + L1MC1 LINE L1 6176 6321 -12 274 291 153 74 chr5_random 740693 741194 -3037289 + HAL1 LINE L1 798 1383 -1124 4709 182 25 39 chr5_random 741752 743097 -3035386 - L1MA7 LINE L1 0 7710 6372 693 108 20 0 chr5_random 743097 743199 -3035284 + L1PA7 LINE L1 6051 6154 0 1793 147 65 0 chr5_random 743217 743510 -3034973 + AluJo SINE Alu 1 312 0 1242 160 24 40 chr5_random 743590 743840 -3034643 - MLT1D LTR MaLR -1 504 259 272 163 0 0 chr5_random 743850 743893 -3034590 - L1MA7 LINE L1 -1183 6382 6340 242 0 61 0 chr5_random 743901 743934 -3034549 + (TTTA)n Simple_repeat Simple_repeat 3 37 0 612 151 142 0 chr5_random 743938 744044 -3034439 - FLAM_C SINE Alu -20 123 3 8063 183 14 30 chr5_random 744052 744228 -3034255 - L1MA7 LINE L1 -1232 6333 6156 4630 183 16 16 chr5_random 744228 745093 -3033390 - MER6 DNA MER2_type 0 865 1 8063 183 14 30 chr5_random 745093 746636 -3031847 - L1MA7 LINE L1 -1409 6156 4640 4010 260 67 16 chr5_random 746638 748635 -3029848 - L1MA7 LINE L1 -3529 4036 2008 3882 128 12 0 chr5_random 748649 749244 -3029239 - LTR43 LTR ERV1 0 602 1 1541 244 25 6 chr5_random 749276 749640 -3028843 - L1MA7 LINE L1 -6637 852 482 2200 118 17 20 chr5_random 751414 751770 -3026713 + THE1A LTR MaLR 1 355 0 11066 108 8 1 chr5_random 751770 753339 -3025144 + THE1A-int LTR MaLR 1 1580 0 2095 143 6 14 chr5_random 753339 753496 -3024987 + THE1A LTR MaLR 1 158 -197 2125 105 7 3 chr5_random 753496 753801 -3024682 - AluSg SINE Alu -4 306 1 2095 143 6 14 chr5_random 753801 754001 -3024482 + THE1A LTR MaLR 158 355 0 765 229 45 0 chr5_random 754066 754223 -3024260 + FRAM SINE Alu 1 164 -2 21 0 0 0 chr5_random 755408 755429 -3023054 + AT_rich Low_complexity Low_complexity 1 21 0 234 300 25 0 chr5_random 755440 755520 -3022963 + CT-rich Low_complexity Low_complexity 4 85 0 25 0 0 0 chr5_random 755568 755593 -3022890 + AT_rich Low_complexity Low_complexity 1 25 0 1617 181 3 17 chr5_random 755886 756179 -3022304 + AluJb SINE Alu 1 289 -23 261 0 0 0 chr5_random 756185 756214 -3022269 + (TAAAA)n Simple_repeat Simple_repeat 2 30 0 186 133 0 0 chr5_random 756711 756741 -3021742 + (TA)n Simple_repeat Simple_repeat 1 30 0 663 233 121 88 chr5_random 757016 757569 -3020914 - MER34B LTR ERV1 -4 538 1 2146 125 0 3 chr5_random 757646 757949 -3020534 + AluSx SINE Alu 1 302 -10 450 211 65 24 chr5_random 758290 758413 -3020070 - MER69 DNA AcHobo -1 2525 2398 2368 77 0 3 chr5_random 758620 758917 -3019566 + AluY SINE Alu 1 296 -15 23 54 0 0 chr5_random 759548 759585 -3018898 + AT_rich Low_complexity Low_complexity 1 37 0 33 56 0 0 chr5_random 759824 759878 -3018605 + AT_rich Low_complexity Low_complexity 1 54 0 1606 174 21 17 chr5_random 766253 766541 -3011942 - AluJo SINE Alu -18 294 6 421 247 85 54 chr5_random 766577 766836 -3011647 - L1M4 LINE L1 -3134 3012 2746 298 103 0 35 chr5_random 767188 767246 -3011237 + (TA)n Simple_repeat Simple_repeat 2 57 0 1171 90 0 114 chr5_random 767262 767463 -3011020 + AluSc SINE Alu 1 178 -131 21 36 0 0 chr5_random 768077 768105 -3010378 + AT_rich Low_complexity Low_complexity 1 28 0 1464 150 17 21 chr5_random 768118 768405 -3010078 - L1MA4 LINE L1 0 6300 6015 520 222 215 0 chr5_random 770229 770373 -3008110 - MER5A DNA MER1_type -1 188 14 771 236 38 80 chr5_random 771348 771687 -3006796 - L1ME1 LINE L1 -8 6158 5834 21 57 0 0 chr5_random 772402 772437 -3006046 + AT_rich Low_complexity Low_complexity 1 35 0 208 191 24 0 chr5_random 772780 772822 -3005661 + (TCTA)n Simple_repeat Simple_repeat 3 45 0 229 284 80 11 chr5_random 773065 773153 -3005330 + MER91C DNA MER1_type 47 140 0 346 339 203 6 chr5_random 774421 774598 -3003885 - MIR SINE MIR -16 246 35 31 44 0 0 chr5_random 774672 774717 -3003766 + AT_rich Low_complexity Low_complexity 1 45 0 367 297 31 8 chr5_random 774918 775046 -3003437 - MIR SINE MIR -3 259 129 224 222 42 0 chr5_random 775122 775194 -3003289 - MIR SINE MIR -42 220 146 420 279 91 41 chr5_random 775785 775982 -3002501 - MIR SINE MIR -48 214 8 360 308 19 9 chr5_random 776289 776396 -3002087 - MIR SINE MIR -64 144 37 604 187 115 44 chr5_random 776408 776590 -3001893 - MER113 DNA MER1_type? 0 521 327 290 217 0 48 chr5_random 776933 777016 -3001467 - L1ME LINE L1 -298 5872 5794 327 278 119 37 chr5_random 777202 777497 -3000986 - L1ME LINE L1 -589 5575 5257 214 288 0 0 chr5_random 777788 777847 -3000636 + (TTTA)n Simple_repeat Simple_repeat 1 59 0 360 325 80 0 chr5_random 777979 778142 -3000341 - L1ME LINE L1 -2155 3991 3816 2225 163 53 5 chr5_random 778143 778194 -3000289 + L1PA16 LINE L1 5730 5777 -389 414 0 0 0 chr5_random 778194 778240 -3000243 + (TA)n Simple_repeat Simple_repeat 1 46 0 2225 163 53 5 chr5_random 778240 778605 -2999878 + L1PA16 LINE L1 5777 6166 0 25 0 0 0 chr5_random 778621 778646 -2999837 + AT_rich Low_complexity Low_complexity 1 25 0 587 237 53 7 chr5_random 778695 778847 -2999636 - LTR40b LTR ERVL 0 462 304 853 277 33 5 chr5_random 778875 779166 -2999317 - HERVL40 LTR ERVL -9 5521 2829 260 228 70 0 chr5_random 779268 779325 -2999158 - HERVL40 LTR ERVL -254 2783 2723 3359 293 69 58 chr5_random 779557 780881 -2997602 - HERVL40 LTR ERVL -2541 2989 1645 1346 82 10 58 chr5_random 780881 781087 -2997396 - MER107 DNA MER1_type 0 197 2 3359 293 69 58 chr5_random 781087 781206 -2997277 - HERVL40 LTR ERVL -3885 1645 1529 9473 113 12 17 chr5_random 781216 782779 -2995704 + L1MA1 LINE L1 2053 3603 -3962 2804 226 8 2 chr5_random 782786 783427 -2995056 + L1MA1 LINE L1 3798 4442 -3123 * 10276 153 14 3 chr5_random 783426 786305 -2992178 + L1MA1 LINE L1 4809 7717 -4 41 21 0 0 chr5_random 786305 786353 -2992130 + AT_rich Low_complexity Low_complexity 1 48 0 1818 124 21 25 chr5_random 786519 786835 -2991648 - AluSx SINE Alu 0 315 1 26 30 0 0 chr5_random 787698 787731 -2990752 + AT_rich Low_complexity Low_complexity 1 33 0 778 187 0 0 chr5_random 787731 787865 -2990618 - AluJo SINE Alu -178 134 1 33 0 0 0 chr5_random 788624 788657 -2989826 + AT_rich Low_complexity Low_complexity 1 33 0 665 186 132 74 chr5_random 789181 789227 -2989256 - MER33 DNA MER1_type -2312 273 231 1862 114 33 0 chr5_random 789227 789539 -2988944 - AluSx SINE Alu 0 321 1 665 186 132 74 chr5_random 789539 789749 -2988734 - MER33 DNA MER1_type -2354 231 1 1398 185 70 27 chr5_random 790153 790451 -2988032 + AluJo SINE Alu 1 311 -1 238 266 16 16 chr5_random 791163 791227 -2987256 - tRNA-Ile-ATT tRNA tRNA -3 74 11 22 70 0 0 chr5_random 791722 791765 -2986718 + AT_rich Low_complexity Low_complexity 1 43 0 297 207 0 161 chr5_random 791897 791984 -2986499 - MER2 DNA MER2_type -5 340 268 1387 182 7 7 chr5_random 792007 792293 -2986190 + AluY SINE Alu 1 286 -25 190 0 0 62 chr5_random 792293 792325 -2986158 + (CAAAC)n Simple_repeat Simple_repeat 2 31 0 2212 66 0 0 chr5_random 792441 792715 -2985768 + AluY SINE Alu 1 274 -37 220 26 0 51 chr5_random 792719 792758 -2985725 + (CAAAA)n Simple_repeat Simple_repeat 1 37 0 1039 146 68 48 chr5_random 792776 792982 -2985501 - MER2 DNA MER2_type -135 210 1 4728 254 92 61 chr5_random 793698 795944 -2982539 - L1M LINE L1 -747 5399 3224 534 180 9 9 chr5_random 795944 796055 -2982428 - L1PB4 LINE L1 -2 6154 6044 1681 130 6 118 chr5_random 796061 796407 -2982076 - AluSg SINE Alu -3 307 1 4728 254 92 61 chr5_random 796407 797207 -2981276 - L1M LINE L1 -2926 3220 2272 471 284 48 57 chr5_random 797301 797635 -2980848 - L1M4 LINE L1 -1310 4836 4506 267 54 0 0 chr5_random 797647 797684 -2980799 + (TC)n Simple_repeat Simple_repeat 2 38 0 264 260 29 0 chr5_random 797684 797788 -2980695 + (TA)n Simple_repeat Simple_repeat 2 108 0 514 273 86 43 chr5_random 797789 798093 -2980390 - L1M4 LINE L1 -1642 4504 4188 11425 217 32 36 chr5_random 798106 800739 -2977744 - L1 LINE L1 -938 5910 3269 1819 154 0 11 chr5_random 800739 801044 -2977439 - AluSx SINE Alu 0 302 1 11425 217 32 36 chr5_random 801044 801286 -2977197 - L1 LINE L1 -3579 3269 3028 2136 85 3 37 chr5_random 801286 801624 -2976859 + AluSx SINE Alu 1 328 0 11425 217 32 36 chr5_random 801624 802110 -2976373 - L1 LINE L1 -3820 3028 2559 1928 213 40 7 chr5_random 802111 802566 -2975917 - L1 LINE L1 -4452 2397 1928 455 303 184 16 chr5_random 852643 853146 -2925337 - LTR50 LTR ERVL -18 777 87 2189 134 8 49 chr5_random 853146 853535 -2924948 + L1PA15 LINE L1 5793 6165 0 1650 152 68 73 chr5_random 853554 853922 -2924561 + L1PA16 LINE L1 5792 6157 -9 321 233 78 0 chr5_random 853931 854021 -2924462 - LTR50 LTR ERVL -693 102 6 216 0 0 0 chr5_random 854161 854185 -2924298 + (TA)n Simple_repeat Simple_repeat 1 24 0 382 233 78 32 chr5_random 854186 854435 -2924048 + Charlie2a DNA MER1_type 1473 1709 -1153 324 0 0 0 chr5_random 854435 854471 -2924012 + (CA)n Simple_repeat Simple_repeat 1 36 0 382 233 78 32 chr5_random 854471 854539 -2923944 + Charlie2a DNA MER1_type 1709 2142 -720 313 241 46 0 chr5_random 854584 854671 -2923812 + MLT2C1 LTR ERVL 3 93 -304 6544 154 11 1 chr5_random 854684 856482 -2922001 - L1MA2 LINE L1 0 6304 4489 682 272 42 50 chr5_random 856482 856801 -2921682 + MLT2C1 LTR ERVL 77 657 -6 225 203 17 34 chr5_random 856810 856869 -2921614 + Charlie2a DNA MER1_type 2167 2224 -638 22 0 0 0 chr5_random 856954 856976 -2921507 + AT_rich Low_complexity Low_complexity 1 22 0 7278 169 92 26 chr5_random 856976 858555 -2919928 - MER52A LTR ERV1 0 1755 1 303 181 28 0 chr5_random 858594 858666 -2919817 + Charlie2a DNA MER1_type 2398 2471 -391 27 29 0 0 chr5_random 858666 858700 -2919783 + AT_rich Low_complexity Low_complexity 1 34 0 365 244 72 48 chr5_random 858706 858915 -2919568 + Charlie2a DNA MER1_type 2630 2843 -19 21 89 0 0 chr5_random 859381 859437 -2919046 + AT_rich Low_complexity Low_complexity 1 56 0 24 0 0 0 chr5_random 859687 859711 -2918772 + AT_rich Low_complexity Low_complexity 1 24 0 26 50 0 0 chr5_random 859969 860009 -2918474 + AT_rich Low_complexity Low_complexity 1 40 0 25 0 0 0 chr5_random 860085 860110 -2918373 + AT_rich Low_complexity Low_complexity 1 25 0 274 59 0 0 chr5_random 860505 860539 -2917944 + Alu SINE Alu 7 40 -261 2090 131 0 0 chr5_random 860539 860837 -2917646 + AluSx SINE Alu 4 301 -11 234 0 0 0 chr5_random 860837 860863 -2917620 + (TA)n Simple_repeat Simple_repeat 2 27 0 216 0 0 0 chr5_random 861131 861155 -2917328 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2025 199 33 44 chr5_random 861506 861803 -2916680 + MLT1C LTR MaLR 15 307 -160 2025 116 0 38 chr5_random 861803 862123 -2916360 + AluSx SINE Alu 1 308 -4 2025 199 33 44 chr5_random 862123 862283 -2916200 + MLT1C LTR MaLR 307 467 0 21 71 0 0 chr5_random 863256 863298 -2915185 + AT_rich Low_complexity Low_complexity 1 42 0 180 77 0 0 chr5_random 864992 865018 -2913465 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 205 302 75 0 chr5_random 865023 865076 -2913407 - L2 LINE L2 -9 3263 3207 25 31 0 0 chr5_random 865886 865918 -2912565 + AT_rich Low_complexity Low_complexity 1 32 0 1769 136 118 12 chr5_random 866261 866600 -2911883 + THE1C LTR MaLR 1 375 0 206 241 0 0 chr5_random 867029 867083 -2911400 + T-rich Low_complexity Low_complexity 1 54 0 3517 245 100 28 chr5_random 867746 869038 -2909445 - L1MC4 LINE L1 -4 8038 6654 23 0 0 0 chr5_random 869046 869069 -2909414 + AT_rich Low_complexity Low_complexity 1 23 0 1447 155 129 4 chr5_random 869069 869333 -2909150 - AluSx SINE Alu -4 298 2 1630 317 71 34 chr5_random 869391 870101 -2908382 + L1M4 LINE L1 3438 4219 -1927 396 103 0 0 chr5_random 870101 870159 -2908324 + (TG)n Simple_repeat Simple_repeat 1 58 0 1630 317 71 34 chr5_random 870159 870759 -2907724 + L1M4 LINE L1 4219 4796 -1350 1735 181 20 57 chr5_random 870923 871326 -2907157 + MLT1B LTR MaLR 3 390 0 254 157 20 0 chr5_random 871463 871514 -2906969 + L1M4 LINE L1 4501 4552 -1594 366 306 5 86 chr5_random 872075 872261 -2906222 - MIR SINE MIR -43 219 49 6051 17 0 0 chr5_random 872265 872958 -2905525 + L1PA3 LINE L1 5463 6155 0 310 322 34 27 chr5_random 873704 873720 -2904763 - L2 LINE L2 -4 3309 3295 222 37 0 0 chr5_random 873720 873747 -2904736 + (TATG)n Simple_repeat Simple_repeat 2 28 0 310 322 34 27 chr5_random 873747 873876 -2904607 - L2 LINE L2 -18 3295 3163 318 143 18 0 chr5_random 873961 874017 -2904466 + LTR40a LTR ERVL 95 151 -368 652 210 61 102 chr5_random 874164 874445 -2904038 + LTR40b LTR ERVL 118 384 -78 216 86 0 0 chr5_random 874445 874480 -2904003 + (TG)n Simple_repeat Simple_repeat 2 36 0 652 210 61 102 chr5_random 874480 874541 -2903942 + LTR40b LTR ERVL 384 446 -16 1725 148 20 23 chr5_random 874542 874846 -2903637 + AluSx SINE Alu 1 303 -9 275 309 257 26 chr5_random 875089 875665 -2902818 - L2 LINE L2 -823 2491 1783 207 317 100 8 chr5_random 875899 876019 -2902464 + MIR SINE MIR 57 187 -75 23 0 0 0 chr5_random 876199 876222 -2902261 + AT_rich Low_complexity Low_complexity 1 23 0 2420 70 0 0 chr5_random 876254 876554 -2901929 + AluY SINE Alu 1 300 -11 547 151 19 137 chr5_random 877966 878171 -2900312 - MER53 DNA DNA 0 189 9 609 213 22 0 chr5_random 878281 878417 -2900066 - L1MA9 LINE L1 -31 6281 6143 1051 239 7 22 chr5_random 878422 878694 -2899789 - MSTD-int LTR MaLR -1466 269 2 657 249 129 10 chr5_random 878696 878905 -2899578 - MSTD LTR MaLR 0 396 163 377 313 123 12 chr5_random 880571 880734 -2897749 - MIR3 SINE MIR -5 203 23 30 0 0 0 chr5_random 881262 881292 -2897191 + AT_rich Low_complexity Low_complexity 1 30 0 27 81 0 0 chr5_random 881531 881593 -2896890 + AT_rich Low_complexity Low_complexity 1 62 0 251 304 9 18 chr5_random 881804 881916 -2896567 + HAL1 LINE L1 2252 2362 -145 21 0 0 0 chr5_random 882042 882063 -2896420 + AT_rich Low_complexity Low_complexity 1 21 0 522 263 114 0 chr5_random 883358 883533 -2894950 - Charlie8 DNA MER1_type -2186 231 37 28 61 0 0 chr5_random 883635 883684 -2894799 + AT_rich Low_complexity Low_complexity 1 49 0 247 160 60 20 chr5_random 885524 885624 -2892859 + (TA)n Simple_repeat Simple_repeat 1 104 0 303 364 14 14 chr5_random 885706 885846 -2892637 + MER5A DNA MER1_type 7 146 -43 24 0 0 0 chr5_random 885881 885905 -2892578 + AT_rich Low_complexity Low_complexity 1 24 0 13051 182 46 18 chr5_random 885910 891039 -2887444 - L1MA4 LINE L1 -1 7718 2418 6713 76 5 0 chr5_random 891059 892002 -2886481 - L1PA7 LINE L1 -3 6151 5206 2408 211 24 9 chr5_random 892002 892454 -2886029 - L1MA4 LINE L1 -5594 1971 1510 395 270 73 0 chr5_random 893057 893194 -2885289 + L1ME1 LINE L1 17 163 -6260 638 236 48 15 chr5_random 893232 893512 -2884971 - MER93b LTR ERV1 0 373 56 2631 204 32 64 chr5_random 893549 894393 -2884090 + L1PBa LINE L1 2078 2894 -3969 2390 229 30 5 chr5_random 894409 895007 -2883476 + L1 LINE L1 3060 3672 -3190 14053 37 5 5 chr5_random 895010 896759 -2881724 - L1P LINE L1 -1146 5000 3251 389 88 0 0 chr5_random 896758 896815 -2881668 + L1P LINE L1 3199 3255 -2891 * 184 227 103 41 chr5_random 896877 896974 -2881509 - L2 LINE L2 -1274 2040 1938 11914 46 1 1 chr5_random 897206 898723 -2879760 - L1P LINE L1 -2874 3272 1755 1267 210 102 45 chr5_random 898723 898814 -2879669 + L1 LINE L1 2951 3035 -3111 1194 220 27 37 chr5_random 898814 899114 -2879369 + AluJo SINE Alu 3 299 -3 1267 210 102 45 chr5_random 899114 899465 -2879018 + L1 LINE L1 3035 3418 -2728 366 317 24 0 chr5_random 899485 899608 -2878875 + L1ME1 LINE L1 208 333 -6090 369 221 26 0 chr5_random 899609 899686 -2878797 - MER20 DNA MER1_type 0 219 141 1255 143 154 62 chr5_random 899743 900015 -2878468 + AluJb SINE Alu 1 297 -15 3255 272 102 28 chr5_random 900080 901895 -2876588 + L1ME1 LINE L1 3858 5974 -987 2387 30 44 0 chr5_random 901895 902190 -2876293 + AluY SINE Alu 1 308 -3 3255 272 102 28 chr5_random 902190 903251 -2875232 + L1ME1 LINE L1 5974 6955 -6 222 62 0 0 chr5_random 903501 903533 -2874950 + (TA)n Simple_repeat Simple_repeat 1 32 0 2121 191 54 30 chr5_random 904041 904502 -2873981 - MER70A LTR ERVL 0 472 1 224 170 0 21 chr5_random 905696 905743 -2872740 + T-rich Low_complexity Low_complexity 2 47 0 2194 62 27 27 chr5_random 905998 906290 -2872193 - AluY SINE Alu -15 296 5 227 262 48 12 chr5_random 907734 907818 -2870665 - L1MC4 LINE L1 -1347 6695 6609 650 132 35 11 chr5_random 907818 908079 -2870404 + (TA)n Simple_repeat Simple_repeat 1 267 0 35 41 0 0 chr5_random 908085 908134 -2870349 + AT_rich Low_complexity Low_complexity 1 49 0 651 80 21 59 chr5_random 908134 908321 -2870162 + (TA)n Simple_repeat Simple_repeat 1 180 0 309 88 29 15 chr5_random 908335 908403 -2870080 + (TA)n Simple_repeat Simple_repeat 2 70 0 261 78 52 26 chr5_random 908446 908523 -2869960 + (TA)n Simple_repeat Simple_repeat 1 79 0 21 36 0 0 chr5_random 908598 908626 -2869857 + AT_rich Low_complexity Low_complexity 1 28 0 532 224 31 19 chr5_random 909821 909956 -2868527 + MIR SINE MIR 103 238 -24 13142 201 14 17 chr5_random 910108 911843 -2866640 - L1PB1 LINE L1 -5 6862 5124 243 0 0 0 chr5_random 911843 911870 -2866613 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 13142 201 14 17 chr5_random 911870 914320 -2864163 - L1PB1 LINE L1 -1743 5124 2627 8540 158 21 3 chr5_random 914318 915786 -2862697 - L1PB1 LINE L1 -5368 1495 1 * 27 73 0 0 chr5_random 916197 916252 -2862231 + AT_rich Low_complexity Low_complexity 1 55 0 23 0 0 0 chr5_random 916401 916424 -2862059 + AT_rich Low_complexity Low_complexity 1 23 0 27 73 0 0 chr5_random 916814 916869 -2861614 + AT_rich Low_complexity Low_complexity 1 55 0 255 235 12 82 chr5_random 916938 917023 -2861460 + L2 LINE L2 3193 3271 -1 1098 163 0 0 chr5_random 917129 917307 -2861176 - L1PA7 LINE L1 -4021 2125 1948 * 20710 112 12 8 chr5_random 917298 921301 -2857182 + L1PA7 LINE L1 2136 6153 -1 234 114 0 0 chr5_random 922902 922937 -2855546 - U2 snRNA snRNA -142 46 12 25 0 0 0 chr5_random 922937 922962 -2855521 + AT_rich Low_complexity Low_complexity 1 25 0 2177 94 39 0 chr5_random 922994 923280 -2855203 - AluSc SINE Alu -10 299 3 520 243 50 9 chr5_random 923315 923533 -2854950 + L1M4 LINE L1 4308 4534 -1612 387 282 2 0 chr5_random 923531 923659 -2854824 + L1MEc LINE L1 2179 2274 -3941 * 1282 271 92 16 chr5_random 923671 924184 -2854299 - MLT1F LTR MaLR 0 542 1 1015 254 109 37 chr5_random 924184 924679 -2853804 + L1MEc LINE L1 2316 2815 -3400 811 227 44 58 chr5_random 924712 925077 -2853406 + L1M4 LINE L1 4156 4515 -1631 416 217 167 7 chr5_random 925154 925292 -2853191 + L1ME1 LINE L1 6002 6161 -5 3323 216 59 33 chr5_random 925301 925844 -2852639 - L1MB7 LINE L1 -20 6164 5637 572 224 75 6 chr5_random 925844 926005 -2852478 - FAM SINE Alu -3 172 1 3323 216 59 33 chr5_random 926005 927174 -2851309 - L1MB7 LINE L1 -547 5637 4353 1850 135 48 7 chr5_random 927174 927463 -2851020 - AluSx SINE Alu -11 301 1 3323 216 59 33 chr5_random 927463 927610 -2850873 - L1MB7 LINE L1 -1831 4353 4211 4277 99 13 10 chr5_random 1127610 1128297 -2650186 - L1MA2 LINE L1 -149 6155 5467 654 298 4 38 chr5_random 1128370 1128608 -2649875 + MLT1I LTR MaLR 180 409 0 2831 90 0 5 chr5_random 1129249 1129625 -2648858 + THE1C LTR MaLR 1 374 -1 281 169 13 39 chr5_random 1129641 1129718 -2648765 + (TATATG)n Simple_repeat Simple_repeat 2 76 0 9185 181 45 17 chr5_random 1129963 1132892 -2645591 - L1MB1 LINE L1 -1 6167 3142 1859 141 42 7 chr5_random 1132892 1133176 -2645307 - AluSx SINE Alu -18 294 1 9185 181 45 17 chr5_random 1133176 1133254 -2645229 - L1MB1 LINE L1 -3026 3142 3068 1854 179 0 7 chr5_random 1133403 1133705 -2644778 + AluJo SINE Alu 1 300 -12 2034 171 55 2 chr5_random 1133833 1134231 -2644252 - MSTB1 LTR MaLR -12 420 2 203 234 0 43 chr5_random 1134490 1134584 -2643899 + (CATATA)n Simple_repeat Simple_repeat 4 93 0 504 303 87 19 chr5_random 1134601 1135073 -2643410 - L1ME2 LINE L1 -218 5929 5412 284 293 81 14 chr5_random 1135127 1135349 -2643134 - L1ME2 LINE L1 -833 5296 5060 355 269 72 87 chr5_random 1135443 1135651 -2642832 - L1ME2 LINE L1 -1201 4928 4724 683 293 117 29 chr5_random 1135666 1136284 -2642199 - L1ME2 LINE L1 -1454 4675 4004 2024 176 23 13 chr5_random 1136337 1136723 -2641760 - MLT1B LTR MaLR 0 390 1 1143 289 63 40 chr5_random 1137284 1138414 -2640069 - L1ME2 LINE L1 -2329 3800 2645 320 299 159 13 chr5_random 1138641 1138798 -2639685 - L1ME2 LINE L1 -3756 2373 2194 2332 109 6 0 chr5_random 1138811 1139252 -2639231 - L1P4 LINE L1 -564 5604 5162 3189 73 34 2 chr5_random 1139252 1139691 -2638792 + L1PA13 LINE L1 5704 6158 -5 1227 246 32 69 chr5_random 1139719 1140256 -2638227 - L1ME3A LINE L1 -27 6143 5627 1898 52 8 56 chr5_random 1140809 1141076 -2637407 + AluY SINE Alu 44 297 -14 233 276 10 10 chr5_random 1141084 1141182 -2637301 - L1M2 LINE L1 -4280 2569 2472 965 184 103 17 chr5_random 1141203 1141436 -2637047 - LTR39 LTR ERV1 -530 253 1 313 383 27 16 chr5_random 1141447 1141630 -2636853 - L1ME2 LINE L1 -5603 516 332 2226 106 23 3 chr5_random 1142497 1142799 -2635684 - AluSc SINE Alu -1 308 1 501 17 0 0 chr5_random 1142860 1142918 -2635565 + (TTTTA)n Simple_repeat Simple_repeat 1 58 0 2227 58 0 0 chr5_random 1142918 1143178 -2635305 - AluY SINE Alu -35 276 17 1250 171 199 37 chr5_random 1143674 1144077 -2634406 + LTR48 LTR ERV1 1 468 -319 411 180 38 66 chr5_random 1144099 1144234 -2634249 + LTR48 LTR ERV1 594 636 -71 207 0 0 0 chr5_random 1144234 1144257 -2634226 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 411 180 38 66 chr5_random 1144257 1144325 -2634158 + LTR48 LTR ERV1 636 704 -3 1312 173 27 52 chr5_random 1144917 1145071 -2633412 - MER33 DNA MER1_type -2262 323 167 2243 110 0 0 chr5_random 1145071 1145363 -2633120 - AluSx SINE Alu -20 292 1 1312 173 27 52 chr5_random 1145363 1145537 -2632946 - MER33 DNA MER1_type -2418 167 3 1095 283 84 21 chr5_random 1146214 1146641 -2631842 - MLT1J LTR MaLR -52 459 6 296 179 0 75 chr5_random 1148989 1149056 -2629427 + MIR SINE MIR 78 139 -69 892 183 6 0 chr5_random 1150749 1150918 -2627565 - MER3 DNA MER1_type -86 123 1 1935 162 7 7 chr5_random 1151538 1151846 -2626637 - AluJo SINE Alu -4 308 1 840 73 8 0 chr5_random 1151855 1151979 -2626504 - L1MA8 LINE L1 -3 6288 6164 1804 229 48 50 chr5_random 1153006 1153548 -2624935 - MLT1F LTR MaLR -1 541 1 24 0 0 0 chr5_random 1153645 1153669 -2624814 + AT_rich Low_complexity Low_complexity 1 24 0 1571 184 13 16 chr5_random 1154093 1154398 -2624085 - AluJb SINE Alu -8 304 1 377 287 72 50 chr5_random 1156306 1156487 -2621996 - MIR3 SINE MIR -21 187 3 1722 146 69 33 chr5_random 1156674 1157036 -2621447 + THE1C LTR MaLR 1 375 0 248 282 61 103 chr5_random 1157227 1157440 -2621043 + MIR SINE MIR 59 262 0 416 292 143 19 chr5_random 1159175 1159384 -2619099 + MIR SINE MIR 23 257 -5 361 224 26 79 chr5_random 1159472 1159624 -2618859 + L2 LINE L2 3169 3312 -1 289 362 21 7 chr5_random 1159767 1159908 -2618575 + MIR3 SINE MIR 3 145 -63 2508 20 0 3 chr5_random 1160047 1160369 -2618114 + AluY SINE Alu 1 311 0 240 59 0 0 chr5_random 1160484 1160518 -2617965 + (A)n Simple_repeat Simple_repeat 1 34 0 277 289 6 82 chr5_random 1162190 1162349 -2616134 - MIR SINE MIR -66 196 50 964 138 39 6 chr5_random 1162458 1162639 -2615844 - MER53 DNA DNA -2 187 1 18609 179 31 17 chr5_random 1162698 1169409 -2609074 + L1PA13 LINE L1 1 6813 -1 569 185 22 37 chr5_random 1169513 1169648 -2608835 + MLT1C LTR MaLR 6 138 -252 1809 180 82 20 chr5_random 1169648 1170000 -2608483 + MSTB LTR MaLR 1 382 -44 2107 129 19 43 chr5_random 1170000 1170373 -2608110 + THE1B LTR MaLR 1 364 0 1809 180 82 20 chr5_random 1170373 1170421 -2608062 + MSTB LTR MaLR 382 426 0 1397 160 27 68 chr5_random 1170422 1170760 -2607723 + MLT1C LTR MaLR 142 465 -2 190 164 36 0 chr5_random 1171959 1172014 -2606469 + (CATATA)n Simple_repeat Simple_repeat 6 62 0 185 194 0 111 chr5_random 1172020 1172092 -2606391 + L2 LINE L2 3152 3215 -98 190 275 87 0 chr5_random 1172173 1172242 -2606241 + MIR SINE MIR 123 197 -65 532 289 54 24 chr5_random 1172277 1172443 -2606040 - MIR SINE MIR -74 188 18 201 222 0 0 chr5_random 1172950 1172986 -2605497 + (CA)n Simple_repeat Simple_repeat 1 36 0 222 208 0 0 chr5_random 1173004 1173052 -2605431 + (TA)n Simple_repeat Simple_repeat 1 48 0 183 218 0 0 chr5_random 1173101 1173156 -2605327 + (TA)n Simple_repeat Simple_repeat 2 56 0 305 217 48 0 chr5_random 1173257 1173340 -2605143 + L1MC3 LINE L1 6571 6657 -1128 2112 87 13 51 chr5_random 1173417 1173729 -2604754 - AluY SINE Alu -11 300 1 717 277 177 62 chr5_random 1174202 1174592 -2603891 + L2 LINE L2 2879 3313 0 1058 222 69 29 chr5_random 1175291 1175670 -2602813 + LTR37A LTR ERV1 33 426 0 22 0 0 0 chr5_random 1176422 1176444 -2602039 + AT_rich Low_complexity Low_complexity 1 22 0 5413 147 19 5 chr5_random 1176455 1177345 -2601138 - MER4D LTR ERV1 0 903 1 1661 194 146 7 chr5_random 1177958 1178361 -2600122 + MLT1D LTR MaLR 1 459 -46 589 319 20 20 chr5_random 1179089 1179293 -2599190 - MIR SINE MIR -48 214 11 1690 177 16 22 chr5_random 1179376 1179687 -2598796 + AluJb SINE Alu 1 309 -3 567 285 130 20 chr5_random 1179924 1180124 -2598359 - MIR SINE MIR -38 224 3 404 309 28 51 chr5_random 1180251 1180429 -2598054 - MIR SINE MIR -54 208 35 253 239 14 14 chr5_random 1180730 1180801 -2597682 + MER113 DNA MER1_type? 2 72 -449 248 312 144 16 chr5_random 1181493 1181618 -2596865 - MIR SINE MIR -73 189 49 895 204 60 156 chr5_random 1181630 1182110 -2596373 + MLT1F1 LTR MaLR 6 439 -128 2280 85 24 61 chr5_random 1182587 1182782 -2595701 - THE1B LTR MaLR 0 364 188 2201 104 0 26 chr5_random 1182782 1183090 -2595393 - AluY SINE Alu -11 300 1 2280 85 24 61 chr5_random 1183090 1183272 -2595211 - THE1B LTR MaLR -176 188 1 731 242 0 28 chr5_random 1183763 1183945 -2594538 - AluJo SINE Alu -14 298 122 2468 182 55 108 chr5_random 1184411 1185179 -2593304 - LTR8A LTR ERV1 0 727 1 20035 87 25 23 chr5_random 1187059 1191116 -2587367 - L1PA7 LINE L1 0 6154 2092 12092 111 13 29 chr5_random 1191218 1194054 -2584429 - L1P3 LINE L1 -3608 2853 1 1168 167 39 20 chr5_random 1194793 1194997 -2583486 - AluJb SINE Alu -101 211 4 261 0 0 0 chr5_random 1194998 1195027 -2583456 + (TC)n Simple_repeat Simple_repeat 2 30 0 387 0 0 0 chr5_random 1195085 1195128 -2583355 + (TG)n Simple_repeat Simple_repeat 2 44 0 257 256 110 0 chr5_random 1195492 1195574 -2582909 - L2 LINE L2 0 3313 3223 557 276 123 0 chr5_random 1195578 1195748 -2582735 - MIR SINE MIR -13 249 59 2202 36 0 0 chr5_random 1195980 1196233 -2582250 + AluY SINE Alu 52 304 -7 21 0 0 0 chr5_random 1196795 1196816 -2581667 + AT_rich Low_complexity Low_complexity 1 21 0 304 232 0 0 chr5_random 1196903 1196972 -2581511 + Charlie5 DNA MER1_type 2 70 -2542 482 176 110 7 chr5_random 1196975 1197111 -2581372 + Charlie5 DNA MER1_type 2475 2624 0 550 325 16 10 chr5_random 1197993 1198187 -2580296 + MIR SINE MIR 12 206 -56 2084 98 36 0 chr5_random 1198735 1199010 -2579473 + AluSp SINE Alu 1 285 -28 1062 313 74 0 chr5_random 1201205 1201582 -2576901 - LTR16C LTR ERVL -18 473 69 356 267 73 33 chr5_random 1202675 1202825 -2575658 - MIR SINE MIR -71 191 36 22 80 0 0 chr5_random 1204741 1204791 -2573692 + AT_rich Low_complexity Low_complexity 1 50 0 484 308 65 28 chr5_random 1205525 1205734 -2572749 + MIR SINE MIR 7 228 -34 2028 152 20 47 chr5_random 1205734 1206135 -2572348 + MLT1B LTR MaLR 1 390 0 484 308 65 28 chr5_random 1206135 1206172 -2572311 + MIR SINE MIR 228 262 0 311 309 11 11 chr5_random 1207351 1207445 -2571038 + MIR3 SINE MIR 113 206 -2 28 29 0 0 chr5_random 1207877 1207912 -2570571 + AT_rich Low_complexity Low_complexity 1 35 0 1911 166 0 7 chr5_random 1207925 1208215 -2570268 + AluSx SINE Alu 1 288 -24 715 171 0 0 chr5_random 1208215 1208326 -2570157 - AluJb SINE Alu -201 111 1 195 310 103 43 chr5_random 1208658 1208774 -2569709 + L2 LINE L2 3191 3313 0 2013 94 57 13 chr5_random 1208992 1209290 -2569193 + AluSx SINE Alu 2 312 0 186 65 43 22 chr5_random 1210772 1210818 -2567665 + (TAGA)n Simple_repeat Simple_repeat 2 48 0 511 247 153 28 chr5_random 1211001 1211225 -2567258 - MIR SINE MIR 0 262 16 263 230 219 62 chr5_random 1211339 1211517 -2566966 - L3 LINE CR1 -26 1551 1346 1498 244 21 41 chr5_random 1211659 1212127 -2566356 - LTR40b LTR ERVL -3 459 1 296 285 39 50 chr5_random 1212194 1212373 -2566110 - L3 LINE CR1 -606 971 795 2311 114 0 9 chr5_random 1212474 1212789 -2565694 - AluSx SINE Alu 0 312 1 394 327 134 27 chr5_random 1212920 1213185 -2565298 + L2 LINE L2 2770 3054 -218 1899 170 7 3 chr5_random 1213480 1213780 -2564703 + AluJb SINE Alu 1 301 -11 25 0 0 0 chr5_random 1214556 1214581 -2563902 + AT_rich Low_complexity Low_complexity 1 25 0 380 296 107 45 chr5_random 1214616 1215505 -2562978 + L1MCb LINE L1 1014 2172 -4573 2298 109 0 0 chr5_random 1215944 1216238 -2562245 - AluSx SINE Alu -18 294 1 456 248 68 60 chr5_random 1216699 1216949 -2561534 + MIR SINE MIR 11 262 0 303 321 92 38 chr5_random 1217069 1217309 -2561174 - L3 LINE CR1 -195 1382 1130 1980 158 20 35 chr5_random 1217377 1217655 -2560828 + Tigger2 DNA MER2_type 1 282 -2436 4532 67 5 0 chr5_random 1217655 1218240 -2560243 + L1PA13 LINE L1 5573 6160 -3 1980 158 20 35 chr5_random 1218240 1218398 -2560085 + Tigger2 DNA MER2_type 282 2710 -8 1910 154 3 20 chr5_random 1219317 1219662 -2558821 - MER46B DNA MER2_type -22 214 1 2371 107 25 25 chr5_random 1219884 1220248 -2558235 + THE1B LTR MaLR 1 364 0 370 282 16 114 chr5_random 1220353 1220608 -2557875 - MLT1I LTR MaLR -146 263 34 1671 117 182 0 chr5_random 1221894 1222158 -2556325 - AluSx SINE Alu 0 312 1 33 0 0 0 chr5_random 1223418 1223451 -2555032 + AT_rich Low_complexity Low_complexity 1 33 0 33 56 0 0 chr5_random 1223538 1223592 -2554891 + AT_rich Low_complexity Low_complexity 1 54 0 373 266 140 42 chr5_random 1223592 1223806 -2554677 - L1M4 LINE L1 -1233 4913 4679 4123 198 41 2 chr5_random 1223815 1224615 -2553868 + L1PA13 LINE L1 2 832 -5955 3097 177 23 15 chr5_random 1224619 1230249 -2548234 + L1PA13 LINE L1 890 6777 -37 25 0 0 0 chr5_random 1230249 1230274 -2548209 + AT_rich Low_complexity Low_complexity 1 25 0 972 234 62 15 chr5_random 1230403 1230680 -2547803 - L1ME LINE L1 -700 5464 5156 2165 105 10 3 chr5_random 1230680 1230976 -2547507 - AluSq SINE Alu -15 298 1 972 234 62 15 chr5_random 1230976 1231182 -2547301 - L1ME LINE L1 -1008 5156 4961 1364 228 29 53 chr5_random 1231729 1232105 -2546378 + MLT2B1 LTR ERVL 1 416 -104 270 115 0 0 chr5_random 1232138 1232190 -2546293 + (TA)n Simple_repeat Simple_repeat 1 52 0 343 311 11 0 chr5_random 1233138 1233228 -2545255 - MER81 DNA DNA -21 93 3 819 262 113 37 chr5_random 1233281 1233491 -2544992 - L1MC4a LINE L1 -1958 5850 5601 2533 114 5 11 chr5_random 1233491 1233868 -2544615 - THE1C LTR MaLR 0 375 1 819 262 113 37 chr5_random 1233868 1234012 -2544471 - L1MC4a LINE L1 -2207 5601 5469 805 340 66 28 chr5_random 1234346 1234951 -2543532 - L1MC4a LINE L1 -984 5162 4535 21 0 0 0 chr5_random 1234961 1234982 -2543501 + AT_rich Low_complexity Low_complexity 1 21 0 308 311 90 0 chr5_random 1235178 1235400 -2543083 - L1MC4a LINE L1 -1836 4310 4069 1138 123 6 0 chr5_random 1235451 1235614 -2542869 + L1PA16 LINE L1 5621 5784 -382 43675 41 2 1 chr5_random 1235638 1241776 -2536707 + L1PA3 LINE L1 13 6152 -3 2284 137 50 0 chr5_random 1241791 1242170 -2536313 + L1PA16 LINE L1 5769 6166 0 411 250 39 65 chr5_random 1242187 1242447 -2536036 - L1MC4a LINE L1 -2166 3980 3728 449 265 73 69 chr5_random 1242597 1243009 -2535474 - L1MC4a LINE L1 -2629 3517 3075 1395 286 71 21 chr5_random 1243178 1243712 -2534771 + L1ME3A LINE L1 5326 5886 -284 250 241 17 0 chr5_random 1243877 1243935 -2534548 + L1ME3A LINE L1 6023 6081 -89 21 36 0 0 chr5_random 1243936 1243964 -2534519 + AT_rich Low_complexity Low_complexity 1 28 0 816 251 74 35 chr5_random 1244549 1244832 -2533651 + LTR16C LTR ERVL 194 487 -4 715 245 78 37 chr5_random 1245437 1245731 -2532752 + MER45C DNA AcHobo 5 310 -643 744 197 151 18 chr5_random 1245772 1245990 -2532493 + MER45C DNA AcHobo 707 953 0 1282 153 14 5 chr5_random 1246112 1246327 -2532156 - L1PA16 LINE L1 -9 6157 5941 222 298 35 0 chr5_random 1248102 1248159 -2530324 + L2 LINE L2 3181 3239 -33 279 322 25 41 chr5_random 1248255 1248376 -2530107 - MIR SINE MIR -61 147 29 1832 178 17 56 chr5_random 1248570 1248980 -2529503 - MSTD LTR MaLR 0 396 3 307 333 52 75 chr5_random 1249145 1249319 -2529164 - L2 LINE L2 -1 3271 3102 25 65 0 0 chr5_random 1249761 1249807 -2528676 + AT_rich Low_complexity Low_complexity 1 46 0 1868 124 4 8 chr5_random 1250041 1250307 -2528176 - AluSx SINE Alu -11 301 37 2358 78 0 0 chr5_random 1250333 1250628 -2527855 + AluY SINE Alu 1 295 -16 377 205 74 147 chr5_random 1250657 1250847 -2527636 - MER102b DNA MER1_type 0 341 166 1813 143 56 3 chr5_random 1251167 1251453 -2527030 + AluJb SINE Alu 3 303 -9 216 392 0 0 chr5_random 1251545 1251647 -2526836 + L2 LINE L2 2950 3051 -221 942 186 134 22 chr5_random 1251985 1252187 -2526296 - MLT1D LTR MaLR 0 505 272 2249 136 34 0 chr5_random 1252187 1252539 -2525944 - THE1B LTR MaLR 0 364 1 942 186 134 22 chr5_random 1252539 1252567 -2525916 - MLT1D LTR MaLR -233 272 249 1529 205 0 18 chr5_random 1252622 1252905 -2525578 - AluJb SINE Alu -34 278 1 535 184 0 113 chr5_random 1252911 1253052 -2525431 - MLT1D LTR MaLR -396 109 2 21 0 0 0 chr5_random 1253566 1253587 -2524896 + AT_rich Low_complexity Low_complexity 1 21 0 299 154 0 46 chr5_random 1254023 1254088 -2524395 + MADE1 DNA Mariner 19 80 0 1975 234 92 8 chr5_random 1254097 1254588 -2523895 - MLT1F LTR MaLR -10 532 1 417 284 48 106 chr5_random 1254601 1254999 -2523484 - MLT1F-int LTR MaLR -14 1357 983 431 356 11 11 chr5_random 1255141 1255321 -2523162 - MLT1F-int LTR MaLR -493 878 699 533 315 30 12 chr5_random 1255487 1255652 -2522831 - MLT1F LTR MaLR -369 173 6 22 0 0 0 chr5_random 1255659 1255681 -2522802 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr5_random 1255760 1255781 -2522702 + AT_rich Low_complexity Low_complexity 1 21 0 220 366 12 0 chr5_random 1257254 1257336 -2521147 - L3b LINE CR1 -69 1514 1432 902 291 73 24 chr5_random 1257352 1257764 -2520719 + MLT1J1 LTR MaLR 15 446 0 1905 186 84 5 chr5_random 1258401 1258794 -2519689 - MSTB LTR MaLR -2 424 1 981 224 41 0 chr5_random 1259835 1260031 -2518452 + MER63A DNA MER1_type 1 204 -6 1063 185 70 23 chr5_random 1260392 1260651 -2517832 - L1 LINE L1 -1693 4453 4183 778 154 87 0 chr5_random 1260655 1260804 -2517679 + L1MB1 LINE L1 5971 6132 -57 * 5675 147 27 17 chr5_random 1260802 1262303 -2516180 + L1MA9 LINE L1 4797 6312 0 1087 106 25 127 chr5_random 1262304 1262541 -2515942 + L1MA10 LINE L1 6121 6333 -1 459 279 75 54 chr5_random 1262853 1263409 -2515074 + L1MEd LINE L1 599 1166 -4953 1120 340 112 32 chr5_random 1263458 1264066 -2514417 + L2 LINE L2 2125 2812 -502 1308 218 123 43 chr5_random 1264066 1264529 -2513954 + MLT1D LTR MaLR 5 504 -1 1120 340 112 32 chr5_random 1264529 1264709 -2513774 + L2 LINE L2 2812 2976 -338 863 285 10 0 chr5_random 1264712 1264919 -2513564 - LTR16C LTR ERVL 0 491 283 659 293 87 57 chr5_random 1267094 1267333 -2511150 - L2 LINE L2 0 3313 3083 2239 106 7 0 chr5_random 1267333 1267635 -2510848 + AluSx SINE Alu 1 304 -8 2054 111 52 0 chr5_random 1267642 1267930 -2510553 + AluSx SINE Alu 1 303 -9 659 293 87 57 chr5_random 1267930 1268051 -2510432 - L2 LINE L2 -235 3078 2934 302 343 30 10 chr5_random 1268104 1268203 -2510280 - L2 LINE L2 -25 3247 3147 1095 206 14 0 chr5_random 1268576 1268790 -2509693 + U3 snRNA snRNA 1 217 0 417 139 16 33 chr5_random 1268805 1268927 -2509556 + GA-rich Low_complexity Low_complexity 1 120 0 24 0 0 0 chr5_random 1269172 1269196 -2509287 + AT_rich Low_complexity Low_complexity 1 24 0 477 0 0 0 chr5_random 1269812 1269865 -2508618 + (TG)n Simple_repeat Simple_repeat 1 53 0 193 268 0 0 chr5_random 1270180 1270221 -2508262 - L2 LINE L2 -9 3304 3264 312 200 0 0 chr5_random 1270903 1270968 -2507515 + GA-rich Low_complexity Low_complexity 3 67 0 281 287 75 11 chr5_random 1271142 1271253 -2507230 + MIR SINE MIR 39 156 -52 776 187 113 0 chr5_random 1272497 1272727 -2505756 - MER5C DNA MER1_type 0 324 69 1423 159 74 28 chr5_random 1273198 1273481 -2505002 + AluJo SINE Alu 1 296 -16 207 340 0 0 chr5_random 1274338 1274391 -2504092 - L2 LINE L2 -19 3294 3242 451 315 46 0 chr5_random 1274702 1274832 -2503651 + L2 LINE L2 3137 3272 0 655 245 66 31 chr5_random 1275194 1275312 -2503171 + MIR SINE MIR 59 188 -74 1058 177 23 156 chr5_random 1275312 1275742 -2502741 - MER93b LTR ERV1 0 373 1 655 245 66 31 chr5_random 1275742 1275819 -2502664 + MIR SINE MIR 188 261 -1 24 0 0 0 chr5_random 1277498 1277522 -2500961 + AT_rich Low_complexity Low_complexity 1 24 0 1589 193 108 68 chr5_random 1277719 1278201 -2500282 - MLT1D LTR MaLR -2 503 3 2882 164 66 63 chr5_random 1278242 1278967 -2499516 - LTR8A LTR ERV1 0 727 1 252 0 0 0 chr5_random 1279144 1279172 -2499311 + (TG)n Simple_repeat Simple_repeat 2 29 0 205 314 152 0 chr5_random 1279703 1279808 -2498675 - MIR SINE MIR -77 185 65 364 167 79 79 chr5_random 1279817 1279943 -2498540 + L1MC3 LINE L1 938 1063 -4982 * 649 176 32 27 chr5_random 1279922 1280129 -2498354 + L1MC3 LINE L1 1987 2294 -4425 10643 172 42 18 chr5_random 1280142 1282428 -2496055 + L1MC3 LINE L1 5865 8203 0 1422 238 13 18 chr5_random 1282424 1282810 -2495673 + L1MC3 LINE L1 5420 5803 -363 * 14996 173 43 7 chr5_random 1282873 1284756 -2493727 + L1PB1 LINE L1 2 1815 -5052 7696 25 1 0 chr5_random 1284756 1285811 -2492672 + L1PA3 LINE L1 5101 6155 0 14996 173 43 7 chr5_random 1285811 1286178 -2492305 + L1PB1 LINE L1 1815 2167 -4700 1737 174 34 7 chr5_random 1286178 1286471 -2492012 + AluJb SINE Alu 1 301 -11 14996 173 43 7 chr5_random 1286471 1287099 -2491384 + L1PB1 LINE L1 2167 2771 -4096 1945 167 0 3 chr5_random 1287099 1287410 -2491073 - AluSx SINE Alu -2 310 1 14996 173 43 7 chr5_random 1287410 1291160 -2487323 + L1PB1 LINE L1 2771 6867 0 388 306 46 46 chr5_random 1291160 1291379 -2487104 + L1MC3 LINE L1 5937 6155 -1630 2472 118 48 22 chr5_random 1291951 1292368 -2486115 + MSTC LTR MaLR 1 428 0 935 185 13 69 chr5_random 1292370 1292602 -2485881 - MER20 DNA MER1_type 0 219 1 345 338 62 25 chr5_random 1292629 1292789 -2485694 + MIR SINE MIR 37 202 -60 1946 199 44 3 chr5_random 1293242 1293698 -2484785 - MLT1F LTR MaLR -1 541 14 287 256 0 35 chr5_random 1294114 1294200 -2484283 + MSTB LTR MaLR 188 270 -156 1821 171 7 10 chr5_random 1294213 1294511 -2483972 - AluJb SINE Alu -15 297 1 2372 127 8 24 chr5_random 1295044 1295414 -2483069 - THE1B LTR MaLR 0 364 1 2108 149 91 13 chr5_random 1295601 1295998 -2482485 + MSTA LTR MaLR 1 428 0 9000 167 15 7 chr5_random 1296000 1297178 -2481305 + MSTA-int LTR MaLR 2 1197 -454 1680 161 69 28 chr5_random 1297178 1297538 -2480945 + THE1C LTR MaLR 1 375 0 9000 167 15 7 chr5_random 1297538 1297991 -2480492 + MSTA-int LTR MaLR 1197 1645 -6 2201 155 67 5 chr5_random 1297999 1298400 -2480083 + MSTA LTR MaLR 3 428 0 207 0 0 0 chr5_random 1299089 1299112 -2479371 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1379 211 14 28 chr5_random 1299115 1299400 -2479083 - AluJb SINE Alu -27 285 5 304 304 36 51 chr5_random 1299913 1300051 -2478432 + MIR SINE MIR 77 212 -50 247 278 124 0 chr5_random 1300860 1300957 -2477526 - MIR SINE MIR -68 194 86 1091 207 42 73 chr5_random 1300958 1301316 -2477167 + MLT1A2 LTR MaLR 1 347 -27 1441 192 22 53 chr5_random 1301575 1301893 -2476590 + AluJo SINE Alu 3 310 -2 23 33 0 0 chr5_random 1303005 1303035 -2475448 + AT_rich Low_complexity Low_complexity 1 30 0 1087 116 0 0 chr5_random 1303598 1303744 -2474739 - AluSg/x SINE Alu -21 291 146 1059 180 27 0 chr5_random 1303789 1304011 -2474472 + L1M3 LINE L1 5417 5644 -536 1416 139 132 0 chr5_random 1304013 1304286 -2474197 + MLT2C2 LTR ERVL 1 309 -155 446 173 45 83 chr5_random 1304287 1304420 -2474063 + MER65B LTR ERV1 1 128 -403 271 286 26 56 chr5_random 1304558 1304789 -2473694 + MER65A LTR ERV1 222 445 0 318 89 0 36 chr5_random 1304807 1304863 -2473620 + MLT2C1 LTR ERVL 296 349 -48 277 361 148 7 chr5_random 1305419 1305574 -2472909 + MIR3 SINE MIR 30 206 -2 191 394 53 11 chr5_random 1306754 1306848 -2471635 - L2 LINE L2 -32 3240 3143 188 318 47 83 chr5_random 1307219 1307411 -2471072 - MER5A DNA MER1_type -4 185 1 2316 84 3 0 chr5_random 1307890 1308187 -2470296 + AluSc SINE Alu 3 300 -9 186 292 10 73 chr5_random 1308309 1308405 -2470078 + L2 LINE L2 3180 3269 -44 442 269 26 17 chr5_random 1308824 1308980 -2469503 + MER5B DNA MER1_type 29 188 -1 372 224 0 0 chr5_random 1309155 1309222 -2469261 + MER91A DNA MER1_type 3 69 -71 260 287 116 22 chr5_random 1309358 1309539 -2468944 + L2 LINE L2 3116 3313 0 216 135 0 0 chr5_random 1309562 1309599 -2468884 + (TTCA)n Simple_repeat Simple_repeat 4 40 0 267 258 177 38 chr5_random 1309707 1309916 -2468567 - MLT1L LTR MaLR -8 607 370 466 261 30 85 chr5_random 1311217 1311416 -2467067 - MIR SINE MIR -71 191 4 283 234 32 53 chr5_random 1311561 1311655 -2466828 - L2 LINE L2 -21 3251 3160 193 304 0 0 chr5_random 1311710 1311766 -2466717 - L3b LINE CR1 -346 1237 1182 1966 122 0 11 chr5_random 1312518 1312820 -2465663 - AluY SINE Alu 0 303 5 269 253 149 23 chr5_random 1313294 1313381 -2465102 + L2 LINE L2 3170 3267 -5 2417 80 0 0 chr5_random 1313512 1313812 -2464671 - AluY SINE Alu -11 300 1 3917 164 105 56 chr5_random 1314151 1314720 -2463763 - L1MC3 LINE L1 -14 7771 7130 2548 69 3 0 chr5_random 1314720 1315025 -2463458 - AluSp SINE Alu -7 306 1 3917 164 105 56 chr5_random 1315025 1315468 -2463015 - L1MC3 LINE L1 -655 7130 6710 198 299 45 0 chr5_random 1317190 1317257 -2461226 + MIR SINE MIR 78 147 -61 343 284 37 0 chr5_random 1318724 1318805 -2459678 + L2 LINE L2 3184 3267 -5 401 295 46 29 chr5_random 1319350 1319523 -2458960 + MER5B DNA MER1_type 1 176 -2 28 0 0 0 chr5_random 1320405 1320433 -2458050 + AT_rich Low_complexity Low_complexity 1 28 0 4218 36 0 0 chr5_random 1320463 1320967 -2457516 - L1PA4 LINE L1 0 6155 5652 306 277 24 12 chr5_random 1321102 1321185 -2457298 + MER5A DNA MER1_type 47 130 -59 2144 117 24 0 chr5_random 1321195 1321486 -2456997 + AluSx SINE Alu 9 306 -6 1606 189 99 35 chr5_random 1321748 1322182 -2456301 + MLT2B1 LTR ERVL 3 464 -56 195 184 0 0 chr5_random 1322200 1322238 -2456245 + (TA)n Simple_repeat Simple_repeat 1 38 0 282 115 19 0 chr5_random 1322276 1322328 -2456155 + MLT2B1 LTR ERVL 464 516 -4 28 29 0 0 chr5_random 1323099 1323134 -2455349 + AT_rich Low_complexity Low_complexity 1 35 0 1068 253 107 52 chr5_random 1324034 1324548 -2453935 - MLT1F LTR MaLR 0 542 1 4048 119 25 61 chr5_random 1325328 1326082 -2452401 + LTR8A LTR ERV1 1 727 0 524 298 75 3 chr5_random 1326108 1326307 -2452176 - MIR SINE MIR -5 257 43 327 366 46 6 chr5_random 1327261 1327436 -2451047 - MIR SINE MIR -70 192 11 353 185 206 0 chr5_random 1328286 1328378 -2450105 - L2 LINE L2 0 3313 3203 22 0 0 0 chr5_random 1328936 1328958 -2449525 + AT_rich Low_complexity Low_complexity 1 22 0 22 56 0 0 chr5_random 1329054 1329090 -2449393 + AT_rich Low_complexity Low_complexity 1 36 0 223 349 105 24 chr5_random 1329194 1329591 -2448892 + L2 LINE L2 1690 2124 -1190 285 217 0 17 chr5_random 1330169 1330229 -2448254 + MLT1K LTR MaLR 184 242 -346 502 342 8 41 chr5_random 1332047 1332290 -2446193 + MIR SINE MIR 20 254 -8 22 0 0 0 chr5_random 1332613 1332635 -2445848 + AT_rich Low_complexity Low_complexity 1 22 0 287 240 27 0 chr5_random 1332665 1332740 -2445743 + (TG)n Simple_repeat Simple_repeat 2 78 0 4330 138 40 0 chr5_random 1332758 1333503 -2444980 - Tigger2 DNA MER2_type -1 2717 1943 2426 148 24 0 chr5_random 1333503 1333921 -2444562 - L1PBa LINE L1 -6434 429 2 10018 65 2 4 chr5_random 1334052 1335430 -2443053 - L1P LINE L1 -4148 1998 624 4149 69 17 27 chr5_random 1335430 1336127 -2442356 - L1P LINE L1 -5455 691 2 370 313 93 13 chr5_random 1336941 1337091 -2441392 - MER91A DNA MER1_type 0 196 35 619 205 33 0 chr5_random 1337882 1338033 -2440450 - L1ME3A LINE L1 -8 6162 6007 24 0 0 0 chr5_random 1338039 1338063 -2440420 + AT_rich Low_complexity Low_complexity 1 24 0 693 266 29 0 chr5_random 1338544 1338717 -2439766 + MER63A DNA MER1_type 33 210 0 2414 162 119 79 chr5_random 1338744 1339440 -2439043 - LTR8A LTR ERV1 0 727 4 194 337 22 11 chr5_random 1339871 1339960 -2438523 - L2 LINE L2 -5 3308 3219 5741 107 15 37 chr5_random 1340054 1341167 -2437316 + L1PB1 LINE L1 5057 6147 -4 978 216 5 0 chr5_random 1341412 1341606 -2436877 - MLT1B LTR MaLR 0 390 196 304 238 125 0 chr5_random 1341595 1341675 -2436808 - MLT1B LTR MaLR -298 92 3 * 1983 202 87 34 chr5_random 1341675 1342255 -2436228 - MLT1E2 LTR MaLR -18 608 1 379 258 93 41 chr5_random 1342280 1342371 -2436112 - L1M4 LINE L1 -2040 4106 4021 393 39 0 0 chr5_random 1342371 1342422 -2436061 + (TG)n Simple_repeat Simple_repeat 2 52 0 379 258 93 41 chr5_random 1342422 1342524 -2435959 - L1M4 LINE L1 -2125 4021 3903 213 65 0 0 chr5_random 1342859 1342890 -2435593 + (TCTA)n Simple_repeat Simple_repeat 4 34 0 26307 34 0 0 chr5_random 1343276 1347423 -2431060 + L1PA3 LINE L1 2008 6155 0 9786 149 24 5 chr5_random 1347438 1349176 -2429307 - Tigger2 DNA MER2_type -946 1772 1 248 313 35 26 chr5_random 1349635 1349750 -2428733 + MER5A DNA MER1_type 4 119 -70 392 325 36 40 chr5_random 1350381 1350633 -2427850 + L1M4 LINE L1 4699 4949 -1197 331 300 20 36 chr5_random 1350655 1350898 -2427585 + L1M3e LINE L1 -718 565 -5738 2365 263 54 71 chr5_random 1351197 1351458 -2427025 + L1M3e LINE L1 818 1082 -5300 2112 115 3 30 chr5_random 1351458 1351762 -2426721 + AluSg SINE Alu 2 297 -13 2365 263 54 71 chr5_random 1351762 1352722 -2425761 + L1M3e LINE L1 1082 1851 -4531 2222 133 0 0 chr5_random 1352722 1353030 -2425453 + AluSx SINE Alu 1 308 -4 2365 263 54 71 chr5_random 1353030 1354080 -2424403 + L1M3e LINE L1 1851 2917 -3465 5911 93 16 6 chr5_random 1354082 1354831 -2423652 - L1PA13 LINE L1 0 6163 5423 5327 117 4 10 chr5_random 1354831 1355616 -2422867 + LTR17 LTR ERV1 1 780 0 5911 93 16 6 chr5_random 1355616 1356357 -2422126 - L1PA13 LINE L1 -740 5423 4656 210 37 0 0 chr5_random 1356357 1356384 -2422099 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 5911 93 16 6 chr5_random 1356384 1356716 -2421767 - L1PA13 LINE L1 -1507 4656 4329 659 181 30 121 chr5_random 1356762 1356994 -2421489 + MLT1A2 LTR MaLR 1 211 -163 2289 191 47 8 chr5_random 1357020 1357148 -2421335 + L1MA9 LINE L1 5168 5290 -1022 195 42 0 0 chr5_random 1357148 1357172 -2421311 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2289 191 47 8 chr5_random 1357172 1357636 -2420847 + L1MA9 LINE L1 5290 5779 -533 342 0 0 0 chr5_random 1357639 1357677 -2420806 + (CA)n Simple_repeat Simple_repeat 2 39 0 267 308 0 11 chr5_random 1357726 1357817 -2420666 - MLT1A2 LTR MaLR -148 226 137 23 0 0 0 chr5_random 1357830 1357853 -2420630 + AT_rich Low_complexity Low_complexity 1 23 0 2064 190 38 8 chr5_random 1357863 1358332 -2420151 + L1MA9 LINE L1 5788 6270 -42 760 185 19 0 chr5_random 1358413 1358570 -2419913 + L1MB1 LINE L1 5738 5897 -271 3441 33 9 0 chr5_random 1358574 1359131 -2419352 - L1P2 LINE L1 -647 5508 4949 4092 31 0 0 chr5_random 1359131 1359616 -2418867 + L1PA4 LINE L1 5660 6144 -11 348 103 17 0 chr5_random 1359627 1359685 -2418798 + L1M3 LINE L1 5572 5630 -704 28 48 0 0 chr5_random 1359685 1359727 -2418756 + AT_rich Low_complexity Low_complexity 1 42 0 25 31 0 0 chr5_random 1359770 1359802 -2418681 + AT_rich Low_complexity Low_complexity 1 32 0 5099 94 7 1 chr5_random 1359926 1360646 -2417837 + L1PA14 LINE L1 5438 6161 0 997 274 82 3 chr5_random 1361245 1361585 -2416898 + MLT1G LTR MaLR 10 376 -214 263 83 0 42 chr5_random 1361574 1361622 -2416861 - LTR16A1 LTR ERVL -346 111 66 * 1730 153 68 41 chr5_random 1361643 1362008 -2416475 - THE1C LTR MaLR 0 375 1 2371 26 16 20 chr5_random 1362019 1362325 -2416158 - AluY SINE Alu -6 305 1 3891 160 28 4 chr5_random 1362480 1363167 -2415316 + MER50 LTR ERV1 1 703 -31 1906 169 21 21 chr5_random 1363728 1364065 -2414418 + MER1B DNA MER1_type 1 337 0 300 296 66 13 chr5_random 1366079 1366231 -2412252 - L1 LINE L1 -1881 4265 4106 471 183 8 75 chr5_random 1366235 1366355 -2412128 - MER20 DNA MER1_type -15 204 93 908 192 6 33 chr5_random 1367093 1367275 -2411208 - MER45A DNA AcHobo 0 178 2 243 0 0 0 chr5_random 1367709 1367736 -2410747 + (CA)n Simple_repeat Simple_repeat 1 27 0 459 377 75 22 chr5_random 1367824 1368195 -2410288 + L3 LINE CR1 501 891 -686 854 277 96 27 chr5_random 1368370 1368820 -2409663 + L1ME3A LINE L1 5478 5955 -215 2028 129 17 3 chr5_random 1368919 1369221 -2409262 + AluSx SINE Alu 1 306 -6 218 299 15 15 chr5_random 1369458 1369525 -2408958 + L3 LINE CR1 1209 1275 -302 2381 72 0 3 chr5_random 1370045 1370335 -2408148 - AluY SINE Alu -22 289 1 207 0 0 0 chr5_random 1370528 1370551 -2407932 + (TG)n Simple_repeat Simple_repeat 2 24 0 647 255 165 46 chr5_random 1371197 1371542 -2406941 + MLT1F1 LTR MaLR 29 419 -148 5362 122 73 75 chr5_random 1371548 1373093 -2405390 + pTR5 LTR ERV1 743 2438 0 603 248 14 0 chr5_random 1373098 1373243 -2405240 + MLT1F1 LTR MaLR 421 567 0 397 198 12 12 chr5_random 1373281 1373362 -2405121 - Tigger7 DNA MER2_type 0 2487 2407 2082 211 15 0 chr5_random 1373379 1373777 -2404706 - Tigger7 DNA MER2_type -326 407 4 2042 234 30 0 chr5_random 1373853 1374322 -2404161 + MLT1D LTR MaLR 21 503 -2 1785 171 10 26 chr5_random 1374571 1374875 -2403608 + AluJb SINE Alu 6 304 -8 273 400 9 0 chr5_random 1374903 1375018 -2403465 + L2 LINE L2 3148 3263 -9 2048 131 0 28 chr5_random 1375292 1375612 -2402871 - AluSq SINE Alu -2 311 1 2732 138 7 2 chr5_random 1375878 1376304 -2402179 - MSTA LTR MaLR 0 428 1 218 304 0 0 chr5_random 1377025 1377117 -2401366 + (TA)n Simple_repeat Simple_repeat 1 92 0 351 309 43 16 chr5_random 1377131 1377319 -2401164 + HAL1b LINE L1 399 591 -757 399 300 104 63 chr5_random 1377511 1377590 -2400893 + L1ME4a LINE L1 5624 5698 -423 2341 120 0 0 chr5_random 1377590 1377898 -2400585 + AluSx SINE Alu 1 308 -4 399 300 104 63 chr5_random 1377898 1378281 -2400202 + L1ME4a LINE L1 5698 6105 -16 2023 124 135 36 chr5_random 1378336 1378722 -2399761 + MSTA LTR MaLR 5 428 0 235 280 15 129 chr5_random 1379205 1379337 -2399146 - L2 LINE L2 -33 3280 3164 26 30 0 0 chr5_random 1380528 1380561 -2397922 + AT_rich Low_complexity Low_complexity 1 33 0 362 339 87 23 chr5_random 1380573 1380791 -2397692 + MIR SINE MIR 31 262 0 189 171 0 0 chr5_random 1381101 1381136 -2397347 + (CA)n Simple_repeat Simple_repeat 2 36 0 269 284 25 12 chr5_random 1381283 1381364 -2397119 + MER5B DNA MER1_type 20 101 -77 716 336 4 0 chr5_random 1382599 1382843 -2395640 - MIR SINE MIR -16 246 2 916 235 22 38 chr5_random 1382898 1383165 -2395318 + MLT1D LTR MaLR 7 270 -197 1623 202 36 50 chr5_random 1384227 1384668 -2393815 + MLT1C LTR MaLR 1 435 -32 188 298 26 88 chr5_random 1384965 1385079 -2393404 + L2 LINE L2 2992 3098 -174 1524 166 9 67 chr5_random 1385222 1385566 -2392917 - MLT1D LTR MaLR -1 504 181 219 375 83 28 chr5_random 1385660 1386055 -2392428 + L2 LINE L2 2469 2885 -429 187 308 10 67 chr5_random 1386114 1386218 -2392265 + L2 LINE L2 3216 3313 0 1636 197 0 0 chr5_random 1386768 1387072 -2391411 - AluJb SINE Alu 0 312 9 267 271 16 49 chr5_random 1387184 1387306 -2391177 + HAL1b LINE L1 773 890 -458 293 284 43 14 chr5_random 1387425 1387566 -2390917 + HAL1 LINE L1 2225 2369 -138 1072 271 95 24 chr5_random 1387904 1388324 -2390159 + LTR16A1 LTR ERVL 8 457 0 327 49 0 0 chr5_random 1388408 1388449 -2390034 + (TG)n Simple_repeat Simple_repeat 1 41 0 332 222 0 44 chr5_random 1388638 1388728 -2389755 - L1MC4 LINE L1 -1343 6699 6614 237 247 13 0 chr5_random 1388733 1388810 -2389673 + (TA)n Simple_repeat Simple_repeat 2 79 0 26 0 0 0 chr5_random 1389613 1389639 -2388844 + AT_rich Low_complexity Low_complexity 1 26 0 329 333 82 13 chr5_random 1390009 1390168 -2388315 + MIR3 SINE MIR 34 203 -5 661 286 82 47 chr5_random 1390447 1390765 -2387718 - MLT1L LTR MaLR -189 426 98 298 261 33 11 chr5_random 1390838 1390930 -2387553 - MIR SINE MIR -75 133 40 1572 237 2 20 chr5_random 1391518 1391956 -2386527 - L1P LINE L1 -993 5153 4724 23 0 0 0 chr5_random 1392224 1392247 -2386236 + AT_rich Low_complexity Low_complexity 1 23 0 1108 162 21 0 chr5_random 1392835 1393026 -2385457 + L1PB1 LINE L1 5956 6150 -1 21 0 0 0 chr5_random 1393252 1393273 -2385210 + AT_rich Low_complexity Low_complexity 1 21 0 718 300 112 30 chr5_random 1394090 1394580 -2383903 - MLT1F LTR MaLR -8 534 22 432 279 211 7 chr5_random 1395428 1395575 -2382908 - MER5A DNA MER1_type 0 189 13 23 0 0 0 chr5_random 1395924 1395947 -2382536 + AT_rich Low_complexity Low_complexity 1 23 0 4890 277 45 49 chr5_random 1395953 1398172 -2380311 + L1M3b LINE L1 12 2238 -4112 2325 145 6 8 chr5_random 1398172 1398537 -2379946 - THE1B LTR MaLR 0 364 1 10901 111 21 0 chr5_random 1398537 1400085 -2378398 - THE1B-int LTR MaLR 0 1580 1 2262 152 5 19 chr5_random 1400085 1400454 -2378029 - THE1B LTR MaLR 0 364 1 4890 277 45 49 chr5_random 1400454 1400966 -2377517 + L1M3b LINE L1 2235 2426 -3924 240 204 0 20 chr5_random 1400966 1401015 -2377468 - Alu SINE Alu -241 61 14 682 264 60 27 chr5_random 1401589 1401875 -2376608 + L1M1 LINE L1 5491 5787 -395 36 23 0 0 chr5_random 1401878 1401921 -2376562 + AT_rich Low_complexity Low_complexity 1 43 0 9309 106 2 1 chr5_random 1402784 1404043 -2374440 + THE1B-int LTR MaLR 320 1580 0 2330 147 3 14 chr5_random 1404043 1404411 -2374072 + THE1B LTR MaLR 1 364 0 366 286 220 16 chr5_random 1404987 1405169 -2373314 + L2 LINE L2 2856 3074 -239 1040 206 63 120 chr5_random 1405182 1405565 -2372918 + MLT1A1 LTR MaLR 5 365 0 229 285 131 15 chr5_random 1405578 1405715 -2372768 + L2 LINE L2 3091 3243 -70 1720 243 56 61 chr5_random 1405790 1406382 -2372101 - MER92B LTR ERV1 -47 589 1 352 231 0 0 chr5_random 1406383 1406448 -2372035 + L2 LINE L2 3249 3313 0 181 286 20 0 chr5_random 1406581 1406630 -2371853 - MIR SINE MIR -19 243 194 198 225 0 0 chr5_random 1407203 1407243 -2371240 - L2 LINE L2 -17 3255 3216 42280 38 23 1 chr5_random 1408316 1414337 -2364146 - L1PA3 LINE L1 0 6155 3 361 22 0 0 chr5_random 1414388 1414433 -2364050 + MADE1 DNA Mariner 3 47 -33 642 209 115 95 chr5_random 1414458 1414711 -2363772 - MIR SINE MIR -3 259 2 1861 157 3 0 chr5_random 1414918 1415204 -2363279 - AluJb SINE Alu -25 287 1 2011 179 92 9 chr5_random 1415470 1415917 -2362566 - Charlie1b DNA MER1_type -4 519 36 30 0 0 0 chr5_random 1416455 1416485 -2361998 + AT_rich Low_complexity Low_complexity 1 30 0 182 393 89 0 chr5_random 1416622 1416734 -2361749 - MIR3 SINE MIR -6 202 81 23 33 0 0 chr5_random 1416903 1416933 -2361550 + AT_rich Low_complexity Low_complexity 1 30 0 502 234 81 5 chr5_random 1416938 1417147 -2361336 - L1M4 LINE L1 -3044 3102 2878 201 74 0 0 chr5_random 1417149 1417176 -2361307 + (TG)n Simple_repeat Simple_repeat 1 27 0 5496 194 40 29 chr5_random 1417272 1417553 -2360930 - L1MC1 LINE L1 -179 6154 5878 2201 112 3 7 chr5_random 1417553 1417880 -2360603 - AluSq SINE Alu 0 313 1 5496 194 40 29 chr5_random 1417880 1419865 -2358618 - L1MC1 LINE L1 -455 5878 3859 2519 72 0 0 chr5_random 1419865 1420170 -2358313 - AluY SINE Alu -6 305 1 5496 194 40 29 chr5_random 1420170 1420345 -2358138 - L1MC1 LINE L1 -2474 3859 3687 24 0 0 0 chr5_random 1420345 1420369 -2358114 + AT_rich Low_complexity Low_complexity 1 24 0 25 31 0 0 chr5_random 1420452 1420484 -2357999 + AT_rich Low_complexity Low_complexity 1 32 0 240 419 73 0 chr5_random 1420535 1420659 -2357824 - MER91A DNA MER1_type -40 156 24 238 284 32 21 chr5_random 1420669 1420764 -2357719 - L1M4 LINE L1 -3378 2768 2673 22 0 0 0 chr5_random 1420822 1420844 -2357639 + AT_rich Low_complexity Low_complexity 1 22 0 300 305 30 6 chr5_random 1420951 1421115 -2357368 + L1M4 LINE L1 2304 2471 -3675 2139 122 20 29 chr5_random 1421163 1421507 -2356976 - THE1B LTR MaLR -2 362 22 2108 99 0 0 chr5_random 1421515 1421797 -2356686 - THE1B-int LTR MaLR -1 1579 1298 3517 82 3 0 chr5_random 1421811 1422285 -2356198 - THE1B-int LTR MaLR -1112 468 1 2032 126 48 25 chr5_random 1422285 1422641 -2355842 - THE1B LTR MaLR 0 364 1 653 293 71 36 chr5_random 1422945 1423198 -2355285 - MIR SINE MIR 0 262 1 1593 173 134 3 chr5_random 1423287 1423594 -2354889 + MER7A DNA MER2_type 2 346 0 287 405 57 36 chr5_random 1423934 1424457 -2354026 - L2 LINE L2 -337 2977 2444 727 170 0 0 chr5_random 1426047 1426153 -2352330 + FRAM SINE Alu 41 146 -30 194 54 0 54 chr5_random 1426439 1426476 -2352007 + (CAAAAA)n Simple_repeat Simple_repeat 2 36 0 582 228 23 19 chr5_random 1426538 1426710 -2351773 + L1MCa LINE L1 1 154 -5891 336 234 0 0 chr5_random 1426837 1426901 -2351582 + L2 LINE L2 3209 3272 0 744 66 9 0 chr5_random 1427589 1427695 -2350788 - L1MA8 LINE L1 -4 6287 6181 447 241 0 0 chr5_random 1427830 1427917 -2350566 - MIR3 SINE MIR -21 187 101 25 51 0 0 chr5_random 1428766 1428805 -2349678 + AT_rich Low_complexity Low_complexity 1 39 0 206 236 0 14 chr5_random 1429236 1429308 -2349175 + CT-rich Low_complexity Low_complexity 2 72 0 3077 190 27 2 chr5_random 1429926 1430515 -2347968 + MER6A DNA MER2_type 1 604 -1 7547 191 91 48 chr5_random 1433321 1435641 -2342842 - Tigger1 DNA MER2_type 0 2418 1 5109 33 2 0 chr5_random 1435981 1436583 -2341900 - L1PA3 LINE L1 -3 6152 5550 1685 275 72 13 chr5_random 1436997 1437416 -2341067 - L1MEc LINE L1 -2697 3518 3125 2278 117 16 42 chr5_random 1437416 1437801 -2340682 - THE1C LTR MaLR 0 375 1 1685 275 72 13 chr5_random 1437801 1438243 -2340240 - L1MEc LINE L1 -3090 3125 2606 16527 185 33 31 chr5_random 1438279 1439560 -2338923 + L1PB2 LINE L1 3 1280 -5587 2111 120 79 15 chr5_random 1439560 1439902 -2338581 + THE1B LTR MaLR 1 364 0 16527 185 33 31 chr5_random 1439902 1442189 -2336294 + L1PB2 LINE L1 1280 3561 -3306 2011 142 10 3 chr5_random 1442189 1442500 -2335983 + AluSq SINE Alu 1 313 0 16527 185 33 31 chr5_random 1442500 1445815 -2332668 + L1PB2 LINE L1 3561 6864 -3 37 0 0 0 chr5_random 1445825 1445862 -2332621 + AT_rich Low_complexity Low_complexity 1 37 0 407 213 95 123 chr5_random 1445862 1446342 -2332141 - L1MEc LINE L1 -3636 2579 2153 1314 179 4 34 chr5_random 1446417 1446651 -2331832 + THE1B LTR MaLR 1 227 -137 1283 267 73 68 chr5_random 1446651 1447802 -2330681 - L1MEc LINE L1 -4579 1817 661 241 329 82 7 chr5_random 1448098 1448244 -2330239 - L1MEc LINE L1 -6027 369 213 2141 131 0 0 chr5_random 1448379 1448684 -2329799 + AluSx SINE Alu 1 305 -7 191 288 45 0 chr5_random 1448862 1448928 -2329555 - L2 LINE L2 -18 3254 3186 248 195 12 61 chr5_random 1449105 1449187 -2329296 + MER112 DNA MER1_type 1 78 -182 234 0 0 0 chr5_random 1449195 1449221 -2329262 + (CA)n Simple_repeat Simple_repeat 1 26 0 2943 172 111 25 chr5_random 1449516 1450307 -2328176 + MER21A LTR ERV1 1 891 -40 35 0 0 0 chr5_random 1450311 1450346 -2328137 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chr5_random 1450552 1450580 -2327903 + AT_rich Low_complexity Low_complexity 1 28 0 2208 110 3 0 chr5_random 1450762 1451062 -2327421 + AluSc SINE Alu 1 301 -8 1743 184 54 16 chr5_random 1452490 1452860 -2325623 - MER31B LTR ERV1 0 466 83 207 280 67 27 chr5_random 1452992 1453067 -2325416 - L2 LINE L2 -7 3265 3188 12060 158 14 56 chr5_random 1453214 1454175 -2324308 + L1MA4A LINE L1 2660 3660 -2643 2869 3 0 0 chr5_random 1454175 1454483 -2324000 + AluY SINE Alu 1 308 -3 12060 158 14 56 chr5_random 1454483 1455233 -2323250 + L1MA4A LINE L1 3660 4440 -1863 696 178 8 0 chr5_random 1455233 1455351 -2323132 + FLAM_C SINE Alu 1 119 -24 207 100 0 0 chr5_random 1455352 1455382 -2323101 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 12060 158 14 56 chr5_random 1455382 1457270 -2321213 + L1MA4A LINE L1 4439 6212 -91 633 193 12 6 chr5_random 1457270 1457441 -2321042 + CT-rich Low_complexity Low_complexity 2 173 0 1159 212 52 10 chr5_random 1457443 1457731 -2320752 - AluSx SINE Alu -1 301 2 226 229 33 16 chr5_random 1458602 1458663 -2319820 + MIR SINE MIR 92 153 -109 2170 86 14 0 chr5_random 1459493 1459812 -2318671 + AluSg SINE Alu 1 323 0 395 244 126 8 chr5_random 1460467 1460594 -2317889 + MIR SINE MIR 91 232 -30 363 310 10 35 chr5_random 1460601 1460798 -2317685 + L1ME LINE L1 5628 5819 -302 651 254 88 20 chr5_random 1461359 1461563 -2316920 - MIR SINE MIR -12 250 34 22 35 0 0 chr5_random 1462172 1462201 -2316282 + AT_rich Low_complexity Low_complexity 1 29 0 382 358 62 11 chr5_random 1462522 1462701 -2315782 - MIR3 SINE MIR -2 206 19 873 187 81 15 chr5_random 1463087 1463285 -2315198 - MER90 LTR ERV1 -1 613 403 483 226 39 0 chr5_random 1463273 1463375 -2315108 - MER90 LTR ERV1 -477 137 32 * 216 0 0 0 chr5_random 1463389 1463413 -2315070 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 827 218 83 9 chr5_random 1463535 1463751 -2314732 + MER46C DNA MER2_type 3 234 -104 679 247 102 25 chr5_random 1463928 1464163 -2314320 - MIR SINE MIR 0 262 10 290 305 0 0 chr5_random 1464637 1464719 -2313764 + CT-rich Low_complexity Low_complexity 2 83 0 2243 102 3 0 chr5_random 1464734 1465027 -2313456 - AluSg SINE Alu -16 294 1 208 307 0 0 chr5_random 1465076 1465151 -2313332 + T-rich Low_complexity Low_complexity 1 75 0 31 26 0 0 chr5_random 1467154 1467192 -2311291 + AT_rich Low_complexity Low_complexity 1 38 0 1824 105 36 69 chr5_random 1467412 1467718 -2310765 + AluSg SINE Alu 1 296 -14 603 284 21 64 chr5_random 1467729 1467965 -2310518 - MIR SINE MIR -15 247 22 1833 181 0 0 chr5_random 1468672 1468982 -2309501 - AluJo SINE Alu 0 312 3 2328 66 23 16 chr5_random 1469244 1469549 -2308934 - AluY SINE Alu -4 307 1 1389 161 177 27 chr5_random 1469678 1470051 -2308432 - L1MB8 LINE L1 -1 6177 5749 322 242 0 0 chr5_random 1470054 1470116 -2308367 + MER2 DNA MER2_type 1 62 -283 2665 102 3 8 chr5_random 1470119 1470491 -2307992 - THE1B-int LTR MaLR -297 1283 914 1103 103 5 88 chr5_random 1470485 1470527 -2307956 - THE1B-int LTR MaLR -1182 398 354 * 2414 53 0 0 chr5_random 1470527 1470809 -2307674 + AluY SINE Alu 21 302 -9 1103 103 5 88 chr5_random 1470809 1470960 -2307523 - THE1B-int LTR MaLR -1226 354 221 1990 192 51 13 chr5_random 1470966 1471106 -2307377 + L1M4 LINE L1 5263 5396 -782 2280 118 25 25 chr5_random 1471106 1471470 -2307013 - THE1B LTR MaLR 0 364 1 1990 192 51 13 chr5_random 1471470 1471797 -2306686 + L1M4 LINE L1 5396 5748 -430 737 240 71 31 chr5_random 1471797 1472051 -2306432 - MER2 DNA MER2_type -1 344 81 1678 77 0 5 chr5_random 1472051 1472273 -2306210 - THE1C-int LTR MaLR -1359 221 1 2302 151 3 11 chr5_random 1472273 1472651 -2305832 - THE1C LTR MaLR 0 375 1 3287 223 99 38 chr5_random 1472652 1473056 -2305427 - L1M4 LINE L1 -2986 3658 3280 355 164 16 0 chr5_random 1473056 1473117 -2305366 - U7 snRNA snRNA -1 62 1 3287 223 99 38 chr5_random 1473117 1474779 -2303704 - L1M4 LINE L1 -3364 3280 1464 1850 200 55 14 chr5_random 1474779 1475194 -2303289 - L1MC3 LINE L1 -7 7778 7347 * 4648 237 63 45 chr5_random 1475187 1475450 -2303033 - L1M4 LINE L1 -5054 1488 1231 3396 131 6 0 chr5_random 1475450 1475961 -2302522 + MER75 DNA T2_type 1 514 0 4648 237 63 45 chr5_random 1475961 1476785 -2301698 - L1M4 LINE L1 -5311 1231 366 2305 116 0 3 chr5_random 1476785 1477096 -2301387 + AluSx SINE Alu 1 310 -2 4648 237 63 45 chr5_random 1477096 1477458 -2301025 - L1M4 LINE L1 -6176 366 12 348 347 49 0 chr5_random 1478138 1478282 -2300201 + L2 LINE L2 3122 3272 0 234 256 49 37 chr5_random 1478753 1478835 -2299648 + L2 LINE L2 3190 3272 0 220 227 210 25 chr5_random 1478834 1478953 -2299530 + L2 LINE L2 3173 3313 0 * 314 320 62 39 chr5_random 1479149 1479277 -2299206 - MER91A DNA MER1_type -25 171 41 26 0 0 0 chr5_random 1480756 1480782 -2297701 + AT_rich Low_complexity Low_complexity 1 26 0 26 30 0 0 chr5_random 1481911 1481944 -2296539 + AT_rich Low_complexity Low_complexity 1 33 0 645 162 8 0 chr5_random 1482019 1482136 -2296347 - FLAM_A SINE Alu -5 137 20 190 322 0 17 chr5_random 1482649 1482708 -2295775 + L2 LINE L2 3213 3270 -2 25 0 0 0 chr5_random 1482843 1482868 -2295615 + AT_rich Low_complexity Low_complexity 1 25 0 259 313 0 17 chr5_random 1483019 1483134 -2295349 + MIR SINE MIR 54 166 -96 382 224 172 0 chr5_random 1483319 1483435 -2295048 - L2 LINE L2 0 3313 3178 962 259 0 26 chr5_random 1483800 1484028 -2294455 - MIR SINE MIR 0 262 41 24 0 0 0 chr5_random 1484134 1484158 -2294325 + AT_rich Low_complexity Low_complexity 1 24 0 242 297 0 20 chr5_random 1485433 1485534 -2292949 + MIR SINE MIR 71 169 -93 1169 149 102 81 chr5_random 1487217 1487539 -2290944 - MSTB1 LTR MaLR 0 432 104 * 1241 164 41 0 chr5_random 1487533 1487753 -2290730 - MSTB1 LTR MaLR -203 229 1 513 269 125 12 chr5_random 1488105 1488311 -2290172 - MIR SINE MIR -2 260 28 1000 153 8 2 chr5_random 1488468 1488718 -2289765 - AluJb SINE Alu -1 311 1 2005 116 0 0 chr5_random 1488859 1489136 -2289347 + AluSx SINE Alu 36 312 0 22 0 0 0 chr5_random 1489298 1489320 -2289163 + AT_rich Low_complexity Low_complexity 1 22 0 208 302 47 35 chr5_random 1489864 1489950 -2288533 + L2 LINE L2 3183 3269 -3 1243 279 19 65 chr5_random 1490925 1491388 -2287095 - MLT1J LTR MaLR -34 477 36 2481 68 0 7 chr5_random 1493757 1494065 -2284418 + AluSg SINE Alu 1 306 -4 2295 84 7 3 chr5_random 1494070 1494366 -2284117 + AluSq SINE Alu 1 297 -16 22 56 0 0 chr5_random 1494591 1494627 -2283856 + AT_rich Low_complexity Low_complexity 1 36 0 448 113 134 0 chr5_random 1495007 1495104 -2283379 + L1MB4 LINE L1 6071 6180 0 873 194 50 0 chr5_random 1495237 1495417 -2283066 + MER5A DNA MER1_type 1 189 0 280 321 46 9 chr5_random 1495422 1495531 -2282952 - L2 LINE L2 -1 3312 3200 767 304 133 33 chr5_random 1495844 1496294 -2282189 - L2 LINE L2 -482 2832 2338 285 330 111 24 chr5_random 1497440 1497819 -2280664 - L2 LINE L2 -594 2720 2309 374 274 114 51 chr5_random 1498188 1498363 -2280120 - MIR3 SINE MIR -15 193 8 641 176 20 46 chr5_random 1498677 1498830 -2279653 - L1PA16 LINE L1 -3 6163 6015 705 278 139 20 chr5_random 1499502 1499898 -2278585 - HAL1b LINE L1 -613 735 293 683 274 28 39 chr5_random 1499915 1500170 -2278313 - L1MC4 LINE L1 -1070 6972 6721 595 181 13 0 chr5_random 1501384 1501539 -2276944 + (TA)n Simple_repeat Simple_repeat 1 157 0 6493 86 23 13 chr5_random 1501563 1503012 -2275471 - L1PA13 LINE L1 -4 6159 4699 21 71 0 0 chr5_random 1503129 1503171 -2275312 + AT_rich Low_complexity Low_complexity 1 42 0 408 345 105 61 chr5_random 1503216 1503805 -2274678 + L2 LINE L2 2040 2654 -660 204 285 70 51 chr5_random 1504247 1504405 -2274078 + L2 LINE L2 3077 3237 -76 798 171 0 13 chr5_random 1504430 1504545 -2273938 + GA-rich Low_complexity Low_complexity 1 116 -441 1856 126 41 4 chr5_random 1504545 1504815 -2273668 + AluSg SINE Alu 1 280 -30 798 171 0 13 chr5_random 1504815 1504995 -2273488 + GA-rich Low_complexity Low_complexity 116 557 0 530 299 87 13 chr5_random 1505166 1505397 -2273086 - MIR SINE MIR 0 262 15 329 125 31 0 chr5_random 1505598 1505662 -2272821 + GA-rich Low_complexity Low_complexity 4 69 0 378 191 83 0 chr5_random 1506216 1506300 -2272183 - MIR SINE MIR -101 161 71 933 198 29 0 chr5_random 1507641 1507848 -2270635 + L1MD1 LINE L1 4970 5182 -964 * 4960 172 37 6 chr5_random 1507839 1508856 -2269627 + L1MD1 LINE L1 5120 6174 -68 1104 125 40 20 chr5_random 1509223 1509423 -2269060 - L1MB4 LINE L1 -151 6029 5826 293 398 85 31 chr5_random 1509480 1509797 -2268686 + L2 LINE L2 2927 3260 -12 384 329 50 21 chr5_random 1509874 1510014 -2268469 + MIR3 SINE MIR 38 181 -27 234 369 7 35 chr5_random 1510922 1511063 -2267420 + MIR SINE MIR 31 167 -95 933 253 83 29 chr5_random 1514215 1514487 -2263996 - MLT1A2 LTR MaLR 0 467 143 2312 49 0 0 chr5_random 1514487 1514774 -2263709 - L1PA4 LINE L1 -8 6147 5861 933 253 83 29 chr5_random 1514774 1514926 -2263557 - MLT1A2 LTR MaLR -324 143 1 1108 63 142 98 chr5_random 1515632 1515837 -2262646 - AluY SINE Alu -13 298 85 2202 104 0 0 chr5_random 1516557 1516846 -2261637 + AluSx SINE Alu 9 297 -15 332 248 173 38 chr5_random 1520618 1520751 -2257732 - L2 LINE L2 -4 3268 3118 447 233 64 121 chr5_random 1521662 1521911 -2256572 - MER112 DNA MER1_type -24 236 2 2098 141 0 0 chr5_random 1523445 1523749 -2254734 + AluSx SINE Alu 1 304 -8 29 28 0 0 chr5_random 1524154 1524190 -2254293 + AT_rich Low_complexity Low_complexity 1 36 0 252 366 40 0 chr5_random 1524736 1524837 -2253646 - MIR SINE MIR -59 203 99 457 317 93 39 chr5_random 1526767 1526962 -2251521 - L1MC/D LINE L1 -748 5398 5215 189 107 0 0 chr5_random 1526962 1526990 -2251493 + (TA)n Simple_repeat Simple_repeat 2 29 0 457 317 93 39 chr5_random 1526990 1527431 -2251052 - L1MC/D LINE L1 -931 5215 4783 420 57 0 0 chr5_random 1527570 1527623 -2250860 - Alu SINE Alu -22 290 238 1091 75 0 0 chr5_random 1527624 1527757 -2250726 - AluSg SINE Alu -177 133 1 289 274 74 93 chr5_random 1528066 1528336 -2250147 - LTR67 LTR ERVL -21 536 272 335 301 71 55 chr5_random 1528338 1528717 -2249766 - L1MC/D LINE L1 -1975 4171 3787 585 318 69 8 chr5_random 1528726 1528971 -2249512 + MIR SINE MIR 2 261 -1 3102 224 24 57 chr5_random 1729147 1730599 -2047884 + L1 LINE L1 3997 5353 -793 984 281 114 24 chr5_random 1732053 1732987 -2045496 + L1ME LINE L1 4069 5170 -976 1820 84 0 0 chr5_random 1732987 1733213 -2045270 + AluY SINE Alu 81 306 -5 984 281 114 24 chr5_random 1733213 1733274 -2045209 + L1ME LINE L1 5170 5224 -922 487 220 43 21 chr5_random 1733270 1733411 -2045072 + L1ME LINE L1 5477 5620 -544 * 11835 39 2 0 chr5_random 1733511 1735573 -2042910 + L1PA4 LINE L1 3859 5923 -232 265 248 167 94 chr5_random 1736017 1736251 -2042232 + MIR SINE MIR 1 251 -11 298 281 77 40 chr5_random 1737491 1737700 -2040783 + MIR SINE MIR 26 249 -13 1024 226 106 34 chr5_random 1738001 1738350 -2040133 + MLT1A2 LTR MaLR 1 374 0 494 285 64 95 chr5_random 1739148 1739576 -2038907 - L2 LINE L2 -738 2576 2165 1401 124 50 0 chr5_random 1739576 1739794 -2038689 + MER30 DNA MER1_type 1 229 -1 494 285 64 95 chr5_random 1739794 1739881 -2038602 - L2 LINE L2 -1149 2165 2077 388 237 76 8 chr5_random 1739952 1740070 -2038413 + L1PB4 LINE L1 6028 6153 -3 202 118 0 29 chr5_random 1740080 1740114 -2038369 + (GGAA)n Simple_repeat Simple_repeat 1 33 0 408 171 43 21 chr5_random 1740119 1740259 -2038224 + GA-rich Low_complexity Low_complexity 2 144 0 * 714 71 35 0 chr5_random 1740245 1740358 -2038125 + (GAAA)n Simple_repeat Simple_repeat 3 119 0 1028 217 123 3 chr5_random 1740399 1740731 -2037752 + MLT1B LTR MaLR 9 380 -10 394 363 72 34 chr5_random 1740739 1741125 -2037358 - L2 LINE L2 -1415 1899 1499 236 277 45 54 chr5_random 1741242 1741354 -2037129 - MIR SINE MIR -62 146 36 285 181 0 0 chr5_random 1742328 1742397 -2036086 + L1ME LINE L1 5591 5655 -509 208 137 39 0 chr5_random 1743099 1743150 -2035333 + CT-rich Low_complexity Low_complexity 2 54 0 534 261 22 8 chr5_random 1743345 1743479 -2035004 + MIR SINE MIR 17 152 -110 2704 160 79 17 chr5_random 1743494 1744127 -2034356 + L1MB7 LINE L1 5497 6168 -16 208 267 23 47 chr5_random 1744142 1744228 -2034255 + MIR SINE MIR 179 262 0 1656 103 15 4 chr5_random 1744995 1745268 -2033215 - MER57-int LTR ERV1 -1438 4825 4550 1265 148 74 0 chr5_random 1745260 1745477 -2033006 - MER57-int LTR ERV1 -957 6580 6348 * 262 258 91 0 chr5_random 1745535 1745601 -2032882 - tRNA-Met-i tRNA tRNA -2 73 2 562 203 108 6 chr5_random 1745681 1745839 -2032644 + LTR52-int LTR ERVL 793 966 -2590 980 151 6 0 chr5_random 1745856 1746203 -2032280 + GA-rich Low_complexity Low_complexity 1 349 0 2117 226 71 53 chr5_random 1746240 1746701 -2031782 + LTR52-int LTR ERVL 1065 1545 -4140 1506 190 43 39 chr5_random 1746701 1747006 -2031477 - AluJo SINE Alu -6 306 1 2117 226 71 53 chr5_random 1747006 1747258 -2031225 + LTR52-int LTR ERVL 1545 1791 -3894 4822 88 4 24 chr5_random 1747306 1748024 -2030459 - L1PB1 LINE L1 0 6151 5448 298 273 109 16 chr5_random 1749267 1749395 -2029088 + MIR SINE MIR 119 258 -4 306 336 34 20 chr5_random 1750218 1750364 -2028119 - MER5A DNA MER1_type -6 183 36 276 340 28 35 chr5_random 1750240 1750384 -2028099 + MER5A DNA MER1_type 43 185 -4 * 2483 118 8 5 chr5_random 1751131 1751530 -2026953 + L1P4 LINE L1 5393 5792 -374 397 115 0 0 chr5_random 1751535 1751596 -2026887 - MSTA LTR MaLR -2 426 366 2421 43 3 12 chr5_random 1751696 1752067 -2026416 + L1PA4 LINE L1 5806 6173 0 1634 289 150 31 chr5_random 1752067 1752319 -2026164 - L2 LINE L2 -308 3005 2784 1805 112 4 4 chr5_random 1752319 1752570 -2025913 + AluSx SINE Alu 58 308 -4 1634 289 150 31 chr5_random 1752570 1753124 -2025359 - L2 LINE L2 -529 2784 2108 276 345 20 20 chr5_random 1753846 1753994 -2024489 - L2 LINE L2 -473 2841 2694 203 191 0 21 chr5_random 1755920 1755967 -2022516 + (TGAA)n Simple_repeat Simple_repeat 3 48 0 417 284 149 10 chr5_random 1756691 1756885 -2021598 - MIR SINE MIR -38 224 4 281 299 103 17 chr5_random 1756915 1757032 -2021451 - MARNA DNA Mariner -366 220 94 720 135 2 0 chr5_random 1757431 1760159 -2018324 + CER Satellite Satellite 1 2733 -8 6890 41 0 0 chr5_random 1760175 1761078 -2017405 - L1P LINE L1 -2977 3169 2267 4399 27 0 0 chr5_random 1761079 1761840 -2016643 + L1P2 LINE L1 5033 5793 -362 581 232 131 53 chr5_random 1761944 1762211 -2016272 - L1M4 LINE L1 -2688 3458 3213 1287 117 84 5 chr5_random 1762211 1762424 -2016059 + MER30 DNA MER1_type 1 230 0 581 232 131 53 chr5_random 1762424 1762834 -2015649 - L1M4 LINE L1 -2933 3213 2836 2074 122 3 22 chr5_random 1762834 1763146 -2015337 - AluSq SINE Alu -3 310 5 581 232 131 53 chr5_random 1763146 1763424 -2015059 - L1M4 LINE L1 -3310 2836 2366 352 319 95 37 chr5_random 1763767 1764093 -2014390 - L1MEc LINE L1 -6016 380 36 1558 184 7 11 chr5_random 1764691 1764974 -2013509 - AluJo SINE Alu -13 299 18 28 0 0 0 chr5_random 1765577 1765605 -2012878 + AT_rich Low_complexity Low_complexity 1 28 0 1723 176 50 45 chr5_random 1765808 1765867 -2012616 - L1M1 LINE L1 -620 5560 5503 379 154 0 13 chr5_random 1765867 1765945 -2012538 - L1MB3 LINE L1 -13 6170 6094 1723 176 50 45 chr5_random 1765945 1766561 -2011922 - L1M1 LINE L1 -677 5503 4945 230 318 29 40 chr5_random 1766697 1766870 -2011613 - L1MC5 LINE L1 -76 7885 7715 2233 101 0 10 chr5_random 1767196 1767494 -2010989 + AluSg1 SINE Alu 1 295 -14 1044 166 5 42 chr5_random 1767645 1767838 -2010645 - AluJo SINE Alu -5 307 122 784 236 11 0 chr5_random 1767881 1768055 -2010428 + L1MD2 LINE L1 6138 6313 -46 397 175 62 10 chr5_random 1769245 1769342 -2009141 + MER112 DNA MER1_type 61 162 -98 339 252 9 47 chr5_random 1770306 1770413 -2008070 + L1ME4a LINE L1 5979 6081 -40 24 32 0 0 chr5_random 1770939 1770970 -2007513 + AT_rich Low_complexity Low_complexity 1 31 0 743 244 58 76 chr5_random 1771101 1771495 -2006988 - L1MC4a LINE L1 -1825 5983 5597 275 170 0 0 chr5_random 1771723 1771770 -2006713 - tRNA-Arg-CGC tRNA tRNA -28 48 2 22 80 0 0 chr5_random 1772707 1772757 -2005726 + AT_rich Low_complexity Low_complexity 1 50 0 1075 137 12 0 chr5_random 1773993 1774154 -2004329 + FRAM SINE Alu 1 158 -18 1884 124 8 0 chr5_random 1774516 1774781 -2003702 - AluSx SINE Alu -45 267 1 577 162 3 0 chr5_random 1777404 1778625 -1999858 - CER Satellite Satellite 0 1224 1 1155 187 63 60 chr5_random 1778660 1778944 -1999539 + AluJo SINE Alu 2 286 -16 830 119 20 7 chr5_random 1779044 1779195 -1999288 - MER53 DNA DNA -1 188 36 23 0 0 0 chr5_random 1780022 1780045 -1998438 + AT_rich Low_complexity Low_complexity 1 23 0 201 239 46 146 chr5_random 1780774 1780904 -1997579 + L2 LINE L2 3197 3313 0 2168 124 0 0 chr5_random 1781273 1781572 -1996911 + AluSx SINE Alu 1 299 -13 22 0 0 0 chr5_random 1783144 1783166 -1995317 + AT_rich Low_complexity Low_complexity 1 22 0 332 261 68 71 chr5_random 1783225 1783550 -1994933 + L1MEc LINE L1 1135 1458 -4938 2314 66 0 0 chr5_random 1783676 1783964 -1994519 + L1P LINE L1 4 291 -5855 * 8438 57 1 0 chr5_random 1783958 1785050 -1993433 + L1P LINE L1 2036 3128 -3018 297 0 0 0 chr5_random 1785597 1785630 -1992853 + (CA)n Simple_repeat Simple_repeat 2 34 0 261 83 0 0 chr5_random 1786122 1786158 -1992325 + (T)n Simple_repeat Simple_repeat 1 36 0 635 248 0 0 chr5_random 1787385 1787510 -1990973 + FLAM_C SINE Alu 1 125 -18 625 292 22 50 chr5_random 1787726 1788003 -1990480 - L2 LINE L2 0 3313 3045 998 207 67 30 chr5_random 1788042 1788376 -1990107 + MLT1D LTR MaLR 70 505 0 330 295 85 55 chr5_random 1788376 1788576 -1989907 - L2 LINE L2 -264 3049 2844 239 236 0 18 chr5_random 1788731 1788786 -1989697 + MER63 DNA MER1_type 677 730 -330 515 171 0 0 chr5_random 1789362 1789450 -1989033 + Ricksha DNA DNA 7 94 -1160 2147 128 58 17 chr5_random 1789472 1789832 -1988651 - THE1C LTR MaLR 0 375 1 492 188 0 10 chr5_random 1789832 1789928 -1988555 - THE1C-int LTR MaLR 0 1580 1486 * 7138 141 52 6 chr5_random 1789925 1791085 -1987398 - THE1C-int LTR MaLR -367 1213 1 2472 116 11 19 chr5_random 1791085 1791463 -1987020 - THE1C LTR MaLR 0 375 1 701 165 0 0 chr5_random 1791464 1791573 -1986910 - FLAM_C SINE Alu -32 111 3 1601 176 6 2 chr5_random 1791574 1791901 -1986582 + Ricksha DNA DNA 95 501 -2745 10902 157 23 38 chr5_random 1791903 1793809 -1984674 + Ricksha DNA DNA 1189 3063 -183 2120 117 0 0 chr5_random 1793809 1794107 -1984376 - AluY SINE Alu -13 298 1 10902 157 23 38 chr5_random 1794107 1794289 -1984194 + Ricksha DNA DNA 3063 3246 0 183 42 0 0 chr5_random 1795158 1795182 -1983301 + (TTTTTG)n Simple_repeat Simple_repeat 3 26 0 1971 189 33 14 chr5_random 1795191 1795627 -1982856 - L1MB4 LINE L1 -63 6117 5684 1198 231 12 0 chr5_random 1795627 1795882 -1982601 + 7SLRNA srpRNA srpRNA 3 260 -60 405 221 12 0 chr5_random 1796262 1796348 -1982135 + 7SLRNA srpRNA srpRNA 230 316 -4 919 138 13 188 chr5_random 1796361 1796615 -1981868 - L1MB4 LINE L1 -483 5700 5403 1455 133 54 117 chr5_random 1796615 1796931 -1981552 - AluSx SINE Alu -15 297 2 919 138 13 188 chr5_random 1796931 1796984 -1981499 - L1MB4 LINE L1 -780 5403 5454 270 0 0 0 chr5_random 1796984 1797014 -1981469 + (TG)n Simple_repeat Simple_repeat 2 31 0 919 138 13 188 chr5_random 1797014 1797045 -1981438 - L1MB4 LINE L1 -728 5455 5420 200 231 103 39 chr5_random 1797067 1797145 -1981338 + MIR SINE MIR 112 194 -68 310 45 23 0 chr5_random 1797908 1797952 -1980531 - MADE1 DNA Mariner -2 78 34 29 0 0 0 chr5_random 1798325 1798354 -1980129 + AT_rich Low_complexity Low_complexity 1 29 0 1512 194 7 7 chr5_random 1798630 1798913 -1979570 + AluJb SINE Alu 7 289 -23 1148 168 40 67 chr5_random 1798981 1799278 -1979205 + AluJo SINE Alu 7 295 -17 1426 186 82 1 chr5_random 1799687 1800153 -1978330 + Charlie1b DNA MER1_type 22 520 -3 4176 201 54 21 chr5_random 1800326 1801002 -1977481 - L1MA9 LINE L1 0 6548 5896 1691 170 42 0 chr5_random 1801002 1801291 -1977192 - AluJo SINE Alu -11 301 1 4176 201 54 21 chr5_random 1801291 1802590 -1975893 - L1MA9 LINE L1 -652 5896 4502 355 188 16 0 chr5_random 1802646 1802710 -1975773 + MER2 DNA MER2_type 281 345 0 367 226 32 11 chr5_random 1802710 1802803 -1975680 - MER2 DNA MER2_type -250 95 1 7216 243 38 7 chr5_random 1802803 1805052 -1973431 - L1MA9 LINE L1 -1871 4511 2187 685 258 58 26 chr5_random 1805638 1805828 -1972655 + MER91A DNA MER1_type 1 196 0 888 301 77 39 chr5_random 1805830 1806246 -1972237 + MLT1K LTR MaLR 147 578 -10 333 267 0 11 chr5_random 1807091 1807181 -1971302 - LTR67 LTR ERVL -35 522 434 960 220 49 106 chr5_random 1807712 1808099 -1970384 + MLT1A1 LTR MaLR 1 365 0 1706 193 77 35 chr5_random 1808420 1808902 -1969581 + MLT1D LTR MaLR 1 502 -3 226 340 68 0 chr5_random 1809645 1809748 -1968735 + MIR SINE MIR 80 189 -73 180 305 24 12 chr5_random 1809772 1809854 -1968629 - MIR SINE MIR -12 250 168 248 353 26 17 chr5_random 1809927 1810043 -1968440 - MIR SINE MIR -122 140 24 669 203 0 0 chr5_random 1810461 1810584 -1967899 + AluJb SINE Alu 3 125 -187 366 308 41 20 chr5_random 1812451 1812597 -1965886 - MIR SINE MIR -90 172 24 231 56 167 0 chr5_random 1812910 1812946 -1965537 + L1M2 LINE L1 5710 5751 -549 373 232 18 62 chr5_random 1813062 1813174 -1965309 + MLT1I LTR MaLR 63 169 -240 950 217 74 50 chr5_random 1813175 1813520 -1964963 + MER67C LTR ERV1 173 511 -3 1407 96 0 5 chr5_random 1813666 1813864 -1964619 + L1PA7 LINE L1 5955 6151 -3 280 318 56 9 chr5_random 1814096 1814203 -1964280 - MIR SINE MIR -71 191 80 394 238 9 29 chr5_random 1814349 1814454 -1964029 + L1MA6 LINE L1 7 109 -6921 12445 235 43 18 chr5_random 1814495 1817952 -1960531 + L1MA6 LINE L1 929 4568 -2538 1454 214 38 3 chr5_random 1817952 1818242 -1960241 + AluJo SINE Alu 8 307 -5 12445 235 43 18 chr5_random 1818242 1819977 -1958506 + L1MA6 LINE L1 4568 6260 -846 2306 164 32 5 chr5_random 1820078 1820510 -1957973 + L1MA6 LINE L1 6305 6748 -512 777 219 7 0 chr5_random 1820512 1820658 -1957825 - MSTA LTR MaLR 0 428 282 764 181 34 13 chr5_random 1820653 1820802 -1957681 - MSTA LTR MaLR -274 152 1 * 983 177 42 5 chr5_random 1820814 1821006 -1957477 + L1MA6 LINE L1 6769 6967 -293 311 192 13 13 chr5_random 1821011 1821089 -1957394 + L1MA6 LINE L1 7183 7260 0 1191 198 44 46 chr5_random 1821612 1822022 -1956461 + LTR37A LTR ERV1 18 426 0 357 336 9 9 chr5_random 1822026 1822133 -1956350 + MER5A DNA MER1_type 60 166 -23 1873 94 0 4 chr5_random 1822650 1822940 -1955543 - AluY SINE Alu 0 327 39 812 167 141 0 chr5_random 1823227 1823383 -1955100 - MER58A DNA MER1_type -13 211 34 38 68 0 0 chr5_random 1824488 1824561 -1953922 + AT_rich Low_complexity Low_complexity 1 73 0 2213 117 19 19 chr5_random 1824561 1824672 -1953811 - L1PA16 LINE L1 -9 6157 6047 1911 144 133 13 chr5_random 1824672 1825054 -1953429 + MSTA LTR MaLR 1 428 0 2213 117 19 19 chr5_random 1825054 1825311 -1953172 - L1PA16 LINE L1 -118 6048 5789 235 163 20 0 chr5_random 1825312 1825361 -1953122 + MSTB LTR MaLR 1 50 -376 4254 239 45 40 chr5_random 1825637 1825665 -1952818 + HERVL74 LTR ERVL 2091 2117 -3568 1651 189 0 7 chr5_random 1825665 1825961 -1952522 - AluJo SINE Alu -18 294 1 4254 239 45 40 chr5_random 1825961 1827206 -1951277 + HERVL74 LTR ERVL 2117 3371 -2314 834 296 73 0 chr5_random 1827701 1828002 -1950481 + LTR53 LTR ERVL 189 511 -8 231 332 109 48 chr5_random 1828629 1828858 -1949625 - MIR SINE MIR -2 260 18 199 309 60 12 chr5_random 1829072 1829156 -1949327 + MER5B DNA MER1_type 1 88 -90 205 354 0 0 chr5_random 1829299 1829347 -1949136 - L2 LINE L2 -22 3250 3203 1270 202 16 20 chr5_random 1830109 1830388 -1948095 + AluJb SINE Alu 35 312 0 204 100 40 20 chr5_random 1832556 1832606 -1945877 + (TG)n Simple_repeat Simple_repeat 2 52 0 370 112 45 50 chr5_random 1832675 1832854 -1945629 + (TG)n Simple_repeat Simple_repeat 2 179 0 246 121 36 36 chr5_random 1832871 1832954 -1945529 + (TG)n Simple_repeat Simple_repeat 1 83 0 312 126 54 36 chr5_random 1832996 1833163 -1945320 + (TG)n Simple_repeat Simple_repeat 2 171 0 278 144 63 29 chr5_random 1833240 1833513 -1944970 + (TG)n Simple_repeat Simple_repeat 1 282 0 24 53 0 0 chr5_random 1834346 1834384 -1944099 + AT_rich Low_complexity Low_complexity 1 38 0 797 248 58 0 chr5_random 1834806 1835048 -1943435 - L1MC1 LINE L1 -1 6332 6077 1532 199 30 7 chr5_random 1835050 1835351 -1943132 + L1MC1 LINE L1 5793 6100 -233 376 141 31 0 chr5_random 1835372 1835436 -1943047 - AluSc SINE Alu -8 291 226 723 136 1 1 chr5_random 1835536 1841889 -1936594 - CER Satellite Satellite 0 6352 1 40 21 0 0 chr5_random 1843179 1843226 -1935257 + AT_rich Low_complexity Low_complexity 1 47 0 545 221 9 9 chr5_random 1843589 1843701 -1934782 + MER49 LTR ERV1 4 115 -808 1726 117 41 21 chr5_random 1843701 1843992 -1934491 - LTR66 LTR ERVL 0 610 314 1529 75 20 0 chr5_random 1843987 1844188 -1934295 - LTR66 LTR ERVL -401 209 5 * 2285 119 18 0 chr5_random 1844192 1844528 -1933955 - HERVL66 LTR ERVL 0 4329 3988 1017 262 9 9 chr5_random 1844528 1844757 -1933726 + L1P3 LINE L1 44 272 -6189 758 135 3 2 chr5_random 1844862 1870998 -1907485 + CER Satellite Satellite 1 26171 -31 429 67 8 176 chr5_random 1871003 1871026 -1907457 - SVA Other Other -431 955 930 8286 57 0 0 chr5_random 1871026 1871986 -1906497 - LTR5 LTR ERVK -9 960 1 429 67 8 176 chr5_random 1871986 1872081 -1906402 - SVA Other Other -456 930 857 27479 39 0 0 chr5_random 1872082 1875280 -1903203 - HERVK LTR ERVK -96 7147 3951 765 136 3 1 chr5_random 1875382 1882334 -1896149 + CER Satellite Satellite 1 6939 -8433 8380 56 0 0 chr5_random 1882334 1883303 -1895180 - LTR5 LTR ERVK 0 969 1 765 136 3 1 chr5_random 1883303 1890686 -1887797 + CER Satellite Satellite 6939 15332 -40 906 210 6 6 chr5_random 1890794 1890975 -1887508 + AluJo SINE Alu 123 303 -9 5861 145 34 76 chr5_random 1890979 1892156 -1886327 - Tigger1 DNA MER2_type 0 2418 1291 1989 120 50 7 chr5_random 1892172 1892472 -1886011 - AluSq SINE Alu 0 313 1 1838 139 20 20 chr5_random 1892473 1892775 -1885708 - Tigger1 DNA MER2_type -1095 1323 1022 585 165 19 0 chr5_random 1892781 1892884 -1885599 - Tigger1 DNA MER2_type -1908 510 406 210 235 15 15 chr5_random 1893020 1893088 -1885395 + (CCCGG)n Simple_repeat Simple_repeat 5 72 0 338 268 27 32 chr5_random 1893839 1894150 -1884333 - LSAU Satellite Satellite 0 498 141 341 215 0 31 chr5_random 1894229 1894359 -1884124 + GA-rich Low_complexity Low_complexity 4 129 0 237 195 0 0 chr5_random 1894758 1894799 -1883684 - MLT1D LTR MaLR -106 399 359 3384 224 33 32 chr5_random 1894882 1896044 -1882439 + L1MB3 LINE L1 4910 6183 0 388 311 0 0 chr5_random 1896054 1896176 -1882307 + L1ME3A LINE L1 5817 5938 -232 2707 162 41 2 chr5_random 1897959 1898423 -1880060 + LTR43 LTR ERV1 121 602 0 782 264 13 53 chr5_random 1898423 1898722 -1879761 + LTR43-int LTR ERV1 1 287 -4511 192 135 0 0 chr5_random 1898927 1898964 -1879519 + (T)n Simple_repeat Simple_repeat 1 37 0 7397 50 0 2 chr5_random 1898971 1900152 -1878331 - L1PA2 LINE L1 0 6155 4976 17594 50 4 3 chr5_random 1900152 1902366 -1876117 + L1P LINE L1 2721 4936 -1210 1833 196 80 46 chr5_random 1902440 1902980 -1875503 - L1MA9 LINE L1 0 6312 5755 3202 219 64 28 chr5_random 1902986 1904376 -1874107 - L1MA9 LINE L1 -598 5693 4255 37 23 0 0 chr5_random 1905942 1905986 -1872497 + AT_rich Low_complexity Low_complexity 1 44 0 1995 149 10 0 chr5_random 1906052 1906354 -1872129 - AluSg SINE Alu -5 305 1 3852 205 27 13 chr5_random 1906355 1907204 -1871279 - L1PB4 LINE L1 0 6156 5296 * 4559 213 22 15 chr5_random 1907191 1908355 -1870128 - L1PB4 LINE L1 -784 5362 4190 228 245 75 28 chr5_random 1908376 1908482 -1870001 + MER5B DNA MER1_type 67 177 -1 1892 148 13 7 chr5_random 1908512 1908817 -1869666 - AluSq SINE Alu -4 309 3 234 272 19 48 chr5_random 1908849 1908952 -1869531 - MER5A DNA MER1_type -59 130 31 184 241 26 95 chr5_random 1909180 1909296 -1869187 - MIR SINE MIR -2 260 153 2215 124 0 0 chr5_random 1910041 1910339 -1868144 + AluY SINE Alu 2 299 -12 1572 191 123 10 chr5_random 1910608 1910991 -1867492 + MSTB LTR MaLR 1 426 0 1231 231 41 7 chr5_random 1911193 1911483 -1867000 - AluJo SINE Alu -11 301 2 33290 71 3 0 chr5_random 1911574 1915825 -1862658 + L1P LINE L1 2 4266 -1880 777 147 4 1 chr5_random 1915895 1949068 -1829415 + CER Satellite Satellite 1 33247 -32 760 144 3 1 chr5_random 1949169 1977435 -1801048 - CER Satellite Satellite 0 28295 1 40 21 0 0 chr5_random 1978725 1978772 -1799711 + AT_rich Low_complexity Low_complexity 1 47 0 551 221 9 9 chr5_random 1979135 1979247 -1799236 + MER49 LTR ERV1 4 115 -808 1738 117 41 21 chr5_random 1979247 1979538 -1798945 - LTR66 LTR ERVL 0 610 314 1541 75 20 0 chr5_random 1979533 1979734 -1798749 - LTR66 LTR ERVL -401 209 5 * 2285 119 18 0 chr5_random 1979738 1980074 -1798409 - HERVL66 LTR ERVL 0 4329 3988 36648 99 10 9 chr5_random 1980074 1986171 -1792312 + L1PA3 LINE L1 46 6147 -8 21 0 0 0 chr5_random 1986171 1986192 -1792291 + AT_rich Low_complexity Low_complexity 1 21 0 4472 203 69 8 chr5_random 1986690 1987720 -1790763 + L1MC1 LINE L1 5239 6329 -4 21 71 0 0 chr5_random 1987743 1987785 -1790698 + AT_rich Low_complexity Low_complexity 1 42 0 763 179 39 6 chr5_random 1987821 1987977 -1790506 + L1MA10 LINE L1 5759 5919 -270 754 220 42 36 chr5_random 1987979 1988293 -1790190 + MSTD LTR MaLR 1 383 -13 894 269 35 32 chr5_random 1988323 1988536 -1789947 + L1MA10 LINE L1 5914 6130 -204 1969 164 130 18 chr5_random 1988536 1988921 -1789562 + MSTA LTR MaLR 1 428 0 894 269 35 32 chr5_random 1988921 1989049 -1789434 + L1MA10 LINE L1 6130 6256 -78 217 326 29 72 chr5_random 1989195 1989301 -1789182 - L2 LINE L2 -938 2376 2276 1963 173 56 12 chr5_random 1989301 1989624 -1788859 - MER1B DNA MER1_type 0 337 1 217 326 29 72 chr5_random 1989624 1989655 -1788828 - L2 LINE L2 -1038 2276 2245 1500 153 52 126 chr5_random 1989888 1990254 -1788229 - MER44D DNA MER2_type 0 609 1 225 167 56 19 chr5_random 1991969 1992023 -1786460 + MLT1H LTR MaLR 494 549 0 1611 186 0 24 chr5_random 1992565 1992856 -1785627 - AluJo SINE Alu -27 285 2 1712 141 0 25 chr5_random 1993253 1993529 -1784954 - AluSx SINE Alu 0 312 44 1741 150 8 0 chr5_random 1994989 1995256 -1783227 - AluSx SINE Alu -13 299 31 3482 89 80 33 chr5_random 1995308 1995860 -1782623 - LTR61 LTR ERV1 -17 578 1 7833 235 26 30 chr5_random 1995862 1997698 -1780785 - HERV3 LTR ERV1 0 8426 6599 2059 213 10 23 chr5_random 1997698 1998093 -1780390 - HERV3 LTR ERV1 -2895 5531 5142 477 260 32 16 chr5_random 1998130 1998253 -1780230 - HERV3 LTR ERV1 -4633 3793 3669 * 4097 235 18 20 chr5_random 1998224 1998690 -1779793 - HERV3 LTR ERV1 -5957 2469 2004 2192 120 0 3 chr5_random 1998690 1998998 -1779485 - AluSg1 SINE Alu -2 307 1 4097 235 18 20 chr5_random 1998998 1999369 -1779114 - HERV3 LTR ERV1 -6422 2004 1634 6794 234 26 44 chr5_random 1999468 2001185 -1777298 - HERV3 LTR ERV1 -6722 1704 19 467 77 90 0 chr5_random 2001203 2001281 -1777202 - LTR61 LTR ERV1 0 595 511 1998 154 0 0 chr5_random 2001282 2001587 -1776896 - AluSx SINE Alu -7 305 1 2196 232 37 40 chr5_random 2001589 2002020 -1776463 - L1MEc LINE L1 -1957 5000 4570 2326 99 0 13 chr5_random 2002020 2002334 -1776149 - AluY SINE Alu -1 310 1 2196 232 37 40 chr5_random 2002334 2002558 -1775925 - L1MEc LINE L1 -2387 4570 4347 341 270 9 0 chr5_random 2002565 2002680 -1775803 + L1M4 LINE L1 2997 3112 -3034 575 265 56 21 chr5_random 2002690 2002977 -1775506 - L1MEc LINE L1 -2617 4340 4044 265 256 70 62 chr5_random 2003013 2003142 -1775341 - LTR47B LTR ERVL -38 405 276 2715 260 74 51 chr5_random 2003406 2004210 -1774273 - L1MEc LINE L1 -2909 4048 3264 1999 157 0 0 chr5_random 2004210 2004509 -1773974 - AluSq SINE Alu -14 299 1 2715 260 74 51 chr5_random 2004509 2004854 -1773629 - L1MEc LINE L1 -3693 3264 2928 2421 84 0 3 chr5_random 2004854 2005162 -1773321 - AluSc SINE Alu -1 308 2 2715 260 74 51 chr5_random 2005162 2005610 -1772873 - L1MEc LINE L1 -4029 2928 2497 721 243 94 43 chr5_random 2005829 2005865 -1772618 - L1MEc LINE L1 -4543 2492 2459 258 32 0 0 chr5_random 2005865 2005896 -1772587 + (TG)n Simple_repeat Simple_repeat 2 32 0 721 243 94 43 chr5_random 2005896 2006327 -1772156 - L1MEc LINE L1 -4576 2459 1940 304 179 0 0 chr5_random 2006335 2006391 -1772092 - L1MEc LINE L1 -6713 146 91 2022 191 35 42 chr5_random 2007575 2007756 -1770727 + MSTB LTR MaLR 1 182 -244 2148 117 13 3 chr5_random 2007756 2008064 -1770419 - AluY SINE Alu 0 311 1 2022 191 35 42 chr5_random 2008064 2008311 -1770172 + MSTB LTR MaLR 182 426 0 659 299 10 47 chr5_random 2008450 2008748 -1769735 + MER4B-int LTR ERV1 6977 7263 -553 796 231 86 81 chr5_random 2008811 2009171 -1769312 + MER57A LTR ERV1 42 403 0 2247 99 0 0 chr5_random 2009676 2009960 -1768523 + AluSc SINE Alu 6 289 -20 1342 175 4 33 chr5_random 2010250 2010524 -1767959 + MER4B-int LTR ERV1 1028 1293 -5465 1253 144 41 63 chr5_random 2010509 2010599 -1767884 + MER4B-int LTR ERV1 1461 1551 -5207 * 1824 131 32 0 chr5_random 2010599 2010882 -1767601 + AluSg SINE Alu 1 292 -18 1253 144 41 63 chr5_random 2010882 2011062 -1767421 + MER4B-int LTR ERV1 1551 1725 -5033 469 181 181 0 chr5_random 2011058 2011152 -1767331 + MER4B-int LTR ERV1 6645 6755 -3 * 3019 129 117 51 chr5_random 2011155 2011581 -1766902 + MER4B LTR ERV1 1 476 -134 1918 116 0 38 chr5_random 2011581 2011874 -1766609 + AluSg SINE Alu 8 289 -21 3019 129 117 51 chr5_random 2011874 2012019 -1766464 + MER4B LTR ERV1 476 610 0 543 296 142 21 chr5_random 2012092 2012325 -1766158 - MIR SINE MIR 0 262 2 242 249 67 3 chr5_random 2012440 2012532 -1765951 - L1MC/D LINE L1 -439 5682 5614 3579 145 73 31 chr5_random 2013135 2013775 -1764708 - PABL_B LTR ERV1 0 667 1 2259 157 31 38 chr5_random 2013819 2013943 -1764540 - MER65A LTR ERV1 -2 443 320 2442 164 33 26 chr5_random 2013943 2014174 -1764309 - MSTB LTR MaLR -2 424 187 2027 134 7 3 chr5_random 2014174 2014472 -1764011 - AluSx SINE Alu -13 299 1 2442 164 33 26 chr5_random 2014472 2014661 -1763822 - MSTB LTR MaLR -239 187 1 2259 157 31 38 chr5_random 2014661 2014981 -1763502 - MER65A LTR ERV1 -125 320 2 2145 256 50 13 chr5_random 2014989 2015609 -1762874 - MER65A-int LTR ERV1 -2 4869 4227 1626 227 60 86 chr5_random 2015607 2016109 -1762374 - MER65A-int LTR ERV1 -778 4093 3605 * 318 238 12 38 chr5_random 2016182 2016262 -1762221 - LTR49-int LTR ERV1 -976 3960 3883 1215 232 112 18 chr5_random 2016272 2016709 -1761774 - LTR49-int LTR ERV1 -1055 4891 3412 431 208 48 13 chr5_random 2016709 2016951 -1761532 + AluJb SINE Alu 2 288 -24 436 180 167 92 chr5_random 2016952 2017193 -1761290 - LTR49-int LTR ERV1 -1767 4564 4359 415 170 74 59 chr5_random 2017203 2017338 -1761145 - LTR49-int LTR ERV1 -2926 3672 3536 1225 175 90 106 chr5_random 2017471 2018019 -1760464 - LTR49-int LTR ERV1 -3117 3481 1998 443 242 103 15 chr5_random 2018123 2018295 -1760188 - L1M3e LINE L1 -5927 1110 3 29 0 0 0 chr5_random 2018692 2018721 -1759762 + AT_rich Low_complexity Low_complexity 1 29 0 1060 272 82 71 chr5_random 2019470 2019990 -1758493 - LTR49-int LTR ERV1 -3610 1261 729 1904 133 3 23 chr5_random 2019990 2020292 -1758191 - AluSc SINE Alu -8 301 6 1060 272 82 71 chr5_random 2020292 2020477 -1758006 - LTR49-int LTR ERV1 -4142 729 548 1076 110 7 1 chr5_random 2020679 2021742 -1756741 + ACRO1 Satellite acromeric 1 1070 -55 990 202 72 0 chr5_random 2021842 2022065 -1756418 + Tigger7 DNA MER2_type 2245 2483 -4 214 326 29 72 chr5_random 2022302 2022333 -1756150 + L2 LINE L2 2245 2276 -1038 1917 180 56 12 chr5_random 2022333 2022656 -1755827 + MER1B DNA MER1_type 1 337 0 214 326 29 72 chr5_random 2022656 2022762 -1755721 + L2 LINE L2 2276 2376 -938 700 150 150 0 chr5_random 2023036 2023169 -1755314 - MSTA LTR MaLR 0 428 276 534 231 93 0 chr5_random 2023318 2023426 -1755057 - AluJb SINE Alu -24 288 171 1485 182 115 11 chr5_random 2023427 2023696 -1754787 - AluJb SINE Alu -5 297 1 438 186 81 32 chr5_random 2023696 2023820 -1754663 - LOR1-int LTR ERV1 -6428 1692 1563 8014 83 6 7 chr5_random 2023915 2024923 -1753560 - LTR13 LTR ERVK 0 1007 1 4660 201 107 75 chr5_random 2024935 2026243 -1752240 - LOR1-int LTR ERV1 -2793 2078 636 2039 120 3 20 chr5_random 2026243 2026544 -1751939 - AluSc SINE Alu -8 301 6 4660 201 107 75 chr5_random 2026544 2027113 -1751370 - LOR1-int LTR ERV1 -4235 636 87 272 292 22 0 chr5_random 2027905 2027994 -1750489 - MARNA DNA Mariner -220 366 276 1033 271 23 30 chr5_random 2028418 2028721 -1749762 - LTR16C LTR ERVL 0 491 191 2090 162 18 9 chr5_random 2029075 2029409 -1749074 - MER1B DNA MER1_type 0 337 1 1450 199 35 3 chr5_random 2029528 2029810 -1748673 + AluJb SINE Alu 1 291 -21 3691 161 45 21 chr5_random 2030166 2030180 -1748303 + L1PA16 LINE L1 5482 5494 -672 2173 105 0 3 chr5_random 2030180 2030489 -1747994 + AluSq SINE Alu 1 308 0 3691 161 45 21 chr5_random 2030489 2031138 -1747345 + L1PA16 LINE L1 5494 6162 -4 643 187 89 24 chr5_random 2031192 2031315 -1747168 + FLAM_C SINE Alu 1 131 -2 32 67 0 0 chr5_random 2031550 2031610 -1746873 + AT_rich Low_complexity Low_complexity 1 60 0 1907 138 3 0 chr5_random 2031755 2032061 -1746422 - AluSx SINE Alu 0 307 1 21 0 0 0 chr5_random 2032066 2032087 -1746396 + AT_rich Low_complexity Low_complexity 1 21 0 1930 199 110 39 chr5_random 2032364 2032430 -1746053 - Charlie1a DNA MER1_type -1378 1383 1323 1838 122 3 56 chr5_random 2032430 2032734 -1745749 + AluSc SINE Alu 1 288 -21 1930 199 110 39 chr5_random 2032734 2033005 -1745478 - Charlie1a DNA MER1_type -1438 1323 1073 1937 113 39 11 chr5_random 2033005 2033288 -1745195 + AluSx SINE Alu 6 296 -16 1930 199 110 39 chr5_random 2033288 2033711 -1744772 - Charlie1a DNA MER1_type -1688 1073 568 1310 181 111 26 chr5_random 2033711 2033847 -1744636 - AluJb SINE Alu -14 298 175 6436 121 27 11 chr5_random 2033847 2034784 -1743699 + LTR13 LTR ERVK 3 954 0 1310 181 111 26 chr5_random 2034784 2034918 -1743565 - AluJb SINE Alu -137 175 5 958 212 66 69 chr5_random 2034946 2035281 -1743202 - Charlie1a DNA MER1_type -1071 384 51 2237 135 73 9 chr5_random 2035796 2036137 -1742346 - THE1B LTR MaLR -1 363 1 968 161 0 0 chr5_random 2036598 2036747 -1741736 + AluJb SINE Alu 1 149 -163 541 227 39 8 chr5_random 2037042 2037169 -1741314 + MER2 DNA MER2_type 1 131 -214 369 257 0 0 chr5_random 2037169 2037243 -1741240 + Tigger3(Golem) DNA MER2_type 1 74 -2955 3747 131 168 33 chr5_random 2037261 2038272 -1740211 + MER11A LTR ERVK 3 1266 0 543 246 0 0 chr5_random 2038385 2038495 -1739988 + Tigger3(Golem) DNA MER2_type 2919 3028 -1 503 177 206 35 chr5_random 2038523 2038664 -1739819 - MER4C LTR ERV1 -1 464 300 1903 136 90 31 chr5_random 2038722 2039076 -1739407 + THE1C LTR MaLR 1 375 0 1620 130 23 104 chr5_random 2039088 2039221 -1739262 - MER4A LTR ERV1 -311 353 211 2182 127 3 0 chr5_random 2039221 2039520 -1738963 + AluSp SINE Alu 1 300 -13 1620 130 23 104 chr5_random 2039520 2039770 -1738713 - MER4A LTR ERV1 -453 211 1 607 236 96 6 chr5_random 2039770 2039947 -1738536 + MER2 DNA MER2_type 153 345 0 519 339 132 17 chr5_random 2040246 2040662 -1737821 - L2 LINE L2 -786 2528 2065 6888 194 100 62 chr5_random 2040808 2040840 -1737643 + L1MCa LINE L1 23 52 -6374 1937 125 6 67 chr5_random 2040840 2040976 -1737507 + AluSq SINE Alu 1 144 -169 1820 170 3 7 chr5_random 2040976 2041276 -1737207 + AluSx SINE Alu 1 299 -13 1937 125 6 67 chr5_random 2041276 2041466 -1737017 + AluSq SINE Alu 144 307 -6 6888 194 100 62 chr5_random 2041466 2041510 -1736973 + L1MCa LINE L1 52 93 -6333 883 152 0 8 chr5_random 2041510 2041635 -1736848 + FLAM_C SINE Alu 1 124 -9 6888 194 100 62 chr5_random 2041635 2042283 -1736200 + L1MCa LINE L1 93 715 -5711 1215 241 93 32 chr5_random 2042283 2042627 -1735856 + MLT1A1 LTR MaLR 1 365 0 6888 194 100 62 chr5_random 2042627 2043412 -1735071 + L1MCa LINE L1 715 1469 -4957 2332 106 0 0 chr5_random 2043412 2043713 -1734770 + AluY SINE Alu 1 301 -10 6888 194 100 62 chr5_random 2043713 2043969 -1734514 + L1MCa LINE L1 1469 1714 -4712 1929 148 0 7 chr5_random 2043969 2044272 -1734211 - AluSg1 SINE Alu -4 305 5 6888 194 100 62 chr5_random 2044272 2044331 -1734152 + L1MCa LINE L1 1714 1769 -4657 2341 106 0 13 chr5_random 2044331 2044642 -1733841 - AluY SINE Alu 0 311 5 6888 194 100 62 chr5_random 2044642 2044718 -1733765 + L1MCa LINE L1 1769 1841 -4585 1969 141 0 13 chr5_random 2044718 2045017 -1733466 - AluY SINE Alu -16 295 1 6888 194 100 62 chr5_random 2045017 2045258 -1733225 + L1MCa LINE L1 1841 2251 -4175 685 213 41 0 chr5_random 2045282 2045404 -1733079 + AluJ SINE Alu 46 172 -140 806 158 68 15 chr5_random 2045532 2045665 -1732818 + AluJ SINE Alu 157 296 -16 662 194 108 5 chr5_random 2045667 2045853 -1732630 + L1MCa LINE L1 2272 2476 -3950 4162 203 38 6 chr5_random 2045866 2046719 -1731764 + Tigger1 DNA MER2_type 2 881 -1537 355 100 17 17 chr5_random 2046717 2046777 -1731706 + Tigger1 DNA MER2_type 1192 1251 -1167 * 909 188 0 41 chr5_random 2049913 2050083 -1728400 - FRAM SINE Alu -21 155 1 1119 202 14 5 chr5_random 2050109 2050327 -1728156 + AluJo SINE Alu 57 276 -36 802 209 40 25 chr5_random 2051507 2051708 -1726775 + AluJo SINE Alu 102 305 -7 509 248 16 8 chr5_random 2052142 2052266 -1726217 + MER2 DNA MER2_type 7 131 -214 344 300 0 0 chr5_random 2052266 2052346 -1726137 + Tigger3(Golem) DNA MER2_type 1 80 -2949 524 192 48 0 chr5_random 2052459 2052563 -1725920 + Tigger3(Golem) DNA MER2_type 2920 3028 -1 1001 200 34 0 chr5_random 2052564 2052769 -1725714 + MER2 DNA MER2_type 131 342 -3 426 351 118 19 chr5_random 2053079 2053501 -1724982 - L2 LINE L2 -786 2528 2065 2047 266 20 28 chr5_random 2053744 2054349 -1724134 + L1MCa LINE L1 70 669 -5757 802 94 4 0 chr5_random 2054360 2055586 -1722897 + CER Satellite Satellite 1 1231 -22 29 28 0 0 chr5_random 2055609 2055645 -1722838 + AT_rich Low_complexity Low_complexity 1 36 0 442 97 0 0 chr5_random 2055679 2055741 -1722742 - CER Satellite Satellite -4 92 31 1684 202 69 16 chr5_random 2055742 2056178 -1722305 - L1MA8 LINE L1 -64 6227 5769 9428 63 24 0 chr5_random 2056220 2058156 -1720327 - L1PA5 LINE L1 -7 6147 4188 3519 76 8 2 chr5_random 2058156 2058641 -1719842 + L1P LINE L1 3122 3609 -2537 770 111 4 3 chr5_random 2058652 2066395 -1712088 + CER Satellite Satellite 1 7747 -6 * 808 190 7 0 chr5_random 2066386 2066523 -1711960 + MLT1A1 LTR MaLR 226 363 -2 3572 189 105 83 chr5_random 2066541 2067976 -1710507 + L1MCa LINE L1 739 2205 -4221 1614 163 57 16 chr5_random 2067975 2068345 -1710138 + L1MCa LINE L1 2104 2488 -3938 * 12410 152 55 38 chr5_random 2068345 2069048 -1709435 + Tigger1 DNA MER2_type 1 691 -1727 2224 116 0 10 chr5_random 2069048 2069358 -1709125 - AluSp SINE Alu -6 307 1 12410 152 55 38 chr5_random 2069358 2070215 -1708268 + Tigger1 DNA MER2_type 691 1532 -886 1905 128 28 10 chr5_random 2070215 2070504 -1707979 + AluSg SINE Alu 1 294 -16 12410 152 55 38 chr5_random 2070504 2071097 -1707386 + Tigger1 DNA MER2_type 1532 2201 -217 1311 188 124 15 chr5_random 2071097 2071363 -1707120 + AluJo SINE Alu 1 295 -7 12410 152 55 38 chr5_random 2071363 2071581 -1706902 + Tigger1 DNA MER2_type 2201 2414 -4 268 296 11 48 chr5_random 2071587 2071648 -1706835 + L1MA10 LINE L1 6100 6162 -172 2308 95 0 0 chr5_random 2071648 2071942 -1706541 - AluY SINE Alu -17 294 1 268 296 11 48 chr5_random 2071942 2072066 -1706417 + L1MA10 LINE L1 6162 6278 -56 839 108 0 17 chr5_random 2072066 2072186 -1706297 + AluSq/x SINE Alu 10 127 -185 1402 167 14 5 chr5_random 2073110 2073325 -1705158 + MER21B LTR ERV1 1 217 -646 3618 36 2 14 chr5_random 2073425 2073843 -1704640 + SVA Other Other 974 1386 0 2511 129 19 44 chr5_random 2073848 2073912 -1704571 + L1 LINE L1 4266 4330 -1816 1789 185 33 0 chr5_random 2073912 2074214 -1704269 - AluSx SINE Alu 0 312 1 2511 129 19 44 chr5_random 2074214 2074623 -1703860 + L1 LINE L1 4330 4727 -1419 264 30 0 0 chr5_random 2074635 2074668 -1703815 + (CA)n Simple_repeat Simple_repeat 2 34 0 801 172 8 0 chr5_random 2075570 2075704 -1702779 + AluJo SINE Alu 1 135 -177 2153 118 3 3 chr5_random 2075721 2076027 -1702456 + AluSx SINE Alu 1 306 -6 1452 99 5 10 chr5_random 2076320 2076522 -1701961 + AluSx SINE Alu 1 201 -111 420 109 0 0 chr5_random 2076529 2076593 -1701890 + AluSx SINE Alu 242 305 -6 1077 205 0 29 chr5_random 2077346 2077556 -1700927 + L1M2 LINE L1 131 334 -6515 * 7814 171 23 18 chr5_random 2077542 2079527 -1698956 + L1M2 LINE L1 1421 3415 -3433 24 32 0 0 chr5_random 2079877 2079908 -1698575 + AT_rich Low_complexity Low_complexity 1 31 0 2133 138 0 6 chr5_random 2080125 2080437 -1698046 + AluSx SINE Alu 2 311 -1 719 164 60 74 chr5_random 2081860 2082085 -1696398 - LTR48 LTR ERV1 0 787 418 1202 138 6 6 chr5_random 2082200 2082381 -1696102 + AluJb SINE Alu 115 295 -17 5261 136 45 23 chr5_random 2082446 2083243 -1695240 - L1PB3 LINE L1 -5 6149 5300 2405 96 0 3 chr5_random 2083243 2083556 -1694927 - AluSp SINE Alu -1 312 1 5261 136 45 23 chr5_random 2083556 2084260 -1694223 - L1PB3 LINE L1 -854 5300 4613 1431 192 185 34 chr5_random 2084267 2084471 -1694012 - L1PB3 LINE L1 -1673 4473 4301 2107 143 0 3 chr5_random 2084471 2084772 -1693711 - AluSx SINE Alu -12 300 1 1431 192 185 34 chr5_random 2084772 2085015 -1693468 - L1PB3 LINE L1 -1845 4301 3958 2169 122 6 3 chr5_random 2085377 2085688 -1692795 + AluSx SINE Alu 1 312 0 3435 139 29 0 chr5_random 2085784 2086296 -1692187 - MER1A DNA MER1_type 0 527 1 1116 240 84 78 chr5_random 2086469 2086630 -1691853 + HAL1 LINE L1 897 1056 -1451 1941 207 151 12 chr5_random 2086630 2087128 -1691355 - MLT1F1 LTR MaLR 0 567 1 1116 240 84 78 chr5_random 2087128 2087365 -1691118 + HAL1 LINE L1 1056 1290 -1217 2301 140 55 26 chr5_random 2087365 2087780 -1690703 - MSTA LTR MaLR 0 428 2 1116 240 84 78 chr5_random 2087780 2088051 -1690432 + HAL1 LINE L1 1290 1574 -933 2381 79 3 0 chr5_random 2088051 2088343 -1690140 - AluSp SINE Alu -20 293 1 1116 240 84 78 chr5_random 2088343 2088374 -1690109 + HAL1 LINE L1 1574 1603 -904 606 147 60 9 chr5_random 2088379 2088495 -1689988 + MLT1A2 LTR MaLR 1 122 -252 1516 191 7 11 chr5_random 2088495 2088773 -1689710 + AluJo SINE Alu 1 277 -35 238 147 27 53 chr5_random 2088773 2088848 -1689635 + A-rich Low_complexity Low_complexity 5 77 0 1000 225 47 32 chr5_random 2088848 2089101 -1689382 + MLT1A2 LTR MaLR 110 366 -8 386 306 65 6 chr5_random 2089106 2089276 -1689207 + HAL1 LINE L1 1605 1784 -723 743 230 109 57 chr5_random 2090623 2090853 -1687630 - MIR SINE MIR -11 251 10 287 224 147 56 chr5_random 2092062 2092205 -1686278 + L3b LINE CR1 1308 1463 -120 252 301 140 0 chr5_random 2092648 2092741 -1685742 - MIR SINE MIR -66 142 37 1808 161 36 21 chr5_random 2092869 2093205 -1685278 + MER2 DNA MER2_type 1 341 -3 1886 114 96 0 chr5_random 2093516 2093797 -1684686 - AluSx SINE Alu -4 308 1 872 180 6 58 chr5_random 2093872 2094044 -1684439 + FAM SINE Alu 2 164 -11 556 264 120 45 chr5_random 2094332 2094574 -1683909 - MIR SINE MIR -2 260 1 273 93 58 12 chr5_random 2094951 2095037 -1683446 + (TA)n Simple_repeat Simple_repeat 1 90 0 919 264 69 20 chr5_random 2095118 2095524 -1682959 - L1ME LINE L1 -483 5687 5262 33 56 0 0 chr5_random 2095763 2095817 -1682666 + AT_rich Low_complexity Low_complexity 1 54 0 505 229 79 36 chr5_random 2096740 2096880 -1681603 - L2 LINE L2 -1 3312 3167 3050 126 11 2 chr5_random 2096898 2097365 -1681118 + Tigger2 DNA MER2_type 1 471 -2247 2262 92 10 0 chr5_random 2097366 2097658 -1680825 + AluSx SINE Alu 1 295 -17 805 137 0 0 chr5_random 2097664 2097781 -1680702 - FLAM_C SINE Alu -16 117 1 1323 186 24 4 chr5_random 2097827 2098080 -1680403 + Tigger2 DNA MER2_type 2451 2708 -10 267 241 45 83 chr5_random 2098092 2098225 -1680258 - L2 LINE L2 -178 3135 3008 1622 162 50 85 chr5_random 2098228 2098629 -1679854 - Tigger1 DNA MER2_type 0 2418 2032 598 221 55 72 chr5_random 2099047 2099228 -1679255 - MER5B DNA MER1_type 0 178 1 434 322 80 58 chr5_random 2099253 2099629 -1678854 + L2 LINE L2 2857 3240 -32 314 319 140 38 chr5_random 2099876 2100033 -1678450 + MIR3 SINE MIR 25 197 -11 302 315 223 10 chr5_random 2100036 2100233 -1678250 + MIR SINE MIR 18 256 -6 1679 136 100 18 chr5_random 2100932 2101262 -1677221 + MER46B DNA MER2_type 1 232 -4 2114 118 9 18 chr5_random 2101802 2102131 -1676352 + MER1B DNA MER1_type 14 339 0 27 0 0 0 chr5_random 2102325 2102352 -1676131 + AT_rich Low_complexity Low_complexity 1 27 0 186 271 119 0 chr5_random 2102816 2102875 -1675608 + L2 LINE L2 3186 3251 -21 1794 236 70 34 chr5_random 2103054 2104131 -1674352 - L1M2 LINE L1 -3597 2943 1859 1718 148 0 31 chr5_random 2104490 2104781 -1673702 + AluJo SINE Alu 1 282 -30 27 29 0 0 chr5_random 2104788 2104822 -1673661 + AT_rich Low_complexity Low_complexity 1 34 0 2244 38 0 4 chr5_random 2104919 2105180 -1673303 + AluY SINE Alu 39 298 -13 1199 242 48 69 chr5_random 2105189 2106076 -1672407 - L1ME LINE L1 -4827 1253 386 12247 191 23 8 chr5_random 2106085 2107490 -1670993 - L1PA15 LINE L1 -2 7601 6218 1974 120 0 45 chr5_random 2107490 2107798 -1670685 - AluSg SINE Alu -10 300 7 12247 191 23 8 chr5_random 2107798 2110085 -1668398 - L1PA15 LINE L1 -1385 6218 3854 2202 269 45 62 chr5_random 2110140 2111245 -1667238 - L1PA15 LINE L1 -5678 1903 11 536 268 90 92 chr5_random 2111247 2111725 -1666758 - L1ME LINE L1 -5581 489 13 930 135 0 0 chr5_random 2112042 2112175 -1666308 + FLAM_C SINE Alu 1 133 0 215 357 0 20 chr5_random 2112363 2112461 -1666022 - MER5B DNA MER1_type -81 97 2 481 318 119 8 chr5_random 2112716 2112952 -1665531 + L3b LINE CR1 1272 1533 -50 291 290 0 0 chr5_random 2112959 2113028 -1665455 - L2 LINE L2 0 3313 3245 296 295 90 42 chr5_random 2113323 2113635 -1664848 + L1M4 LINE L1 4282 4608 -1538 304 262 33 77 chr5_random 2113724 2113907 -1664576 + HAL1 LINE L1 14 188 -2319 493 276 121 43 chr5_random 2114023 2114534 -1663949 + HAL1 LINE L1 736 1286 -1221 2678 220 31 6 chr5_random 2114724 2115361 -1663122 + L1MC4 LINE L1 7185 7837 -205 2087 131 6 13 chr5_random 2115413 2115727 -1662756 + AluSx SINE Alu 1 312 0 301 250 56 46 chr5_random 2115782 2115890 -1662593 - MER46C DNA MER2_type -221 117 9 1583 167 19 7 chr5_random 2115931 2116200 -1662283 + AluJo SINE Alu 1 272 -40 917 220 28 0 chr5_random 2116338 2116520 -1661963 + MER5A DNA MER1_type 3 189 0 2030 153 108 54 chr5_random 2116682 2117256 -1661227 + MER4A LTR ERV1 1 465 0 318 26 0 0 chr5_random 2118201 2118240 -1660243 + (GA)n Simple_repeat Simple_repeat 2 40 0 5987 195 40 9 chr5_random 2118390 2119743 -1658740 + L1 LINE L1 2549 3943 -2203 1141 198 0 5 chr5_random 2119743 2119950 -1658533 + AluJo SINE Alu 81 286 -26 474 157 235 0 chr5_random 2120052 2120154 -1658329 - MER39 LTR ERV1 -581 126 1 2300 84 0 3 chr5_random 2120508 2120820 -1657663 - AluSq SINE Alu 0 311 1 478 317 132 21 chr5_random 2120926 2121207 -1657276 + L3 LINE CR1 981 1292 -285 1102 205 13 13 chr5_random 2121471 2121695 -1656788 - MER58A DNA MER1_type 0 224 1 1869 137 27 10 chr5_random 2123101 2123401 -1655082 - AluJb SINE Alu -7 305 1 792 340 4 8 chr5_random 2124254 2124504 -1653979 - MIR SINE MIR -2 260 12 292 255 255 35 chr5_random 2124539 2124680 -1653803 + MIR SINE MIR 6 177 -85 506 294 101 13 chr5_random 2125650 2125878 -1652605 - L2 LINE L2 -620 2694 2447 2321 97 7 0 chr5_random 2125920 2126219 -1652264 - AluSg SINE Alu -9 301 1 271 302 32 0 chr5_random 2126411 2126474 -1652009 + L2 LINE L2 3166 3230 -42 223 333 40 0 chr5_random 2127162 2127261 -1651222 + MIR3 SINE MIR 103 205 -3 21 0 0 0 chr5_random 2127402 2127423 -1651060 + AT_rich Low_complexity Low_complexity 1 21 0 31 0 0 0 chr5_random 2128366 2128397 -1650086 + AT_rich Low_complexity Low_complexity 1 31 0 208 224 0 60 chr5_random 2128838 2128905 -1649578 + L2 LINE L2 3159 3221 -92 25 0 0 0 chr5_random 2130449 2130474 -1648009 + AT_rich Low_complexity Low_complexity 1 25 0 2263 84 7 3 chr5_random 2130502 2130798 -1647685 - AluY SINE Alu -14 297 1 1603 175 58 0 chr5_random 2130949 2131126 -1647357 - AluJb SINE Alu -4 308 106 207 0 0 0 chr5_random 2131126 2131149 -1647334 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1603 175 58 0 chr5_random 2131149 2131262 -1647221 - AluJb SINE Alu -206 106 1 201 350 50 25 chr5_random 2131384 2131504 -1646979 - L2 LINE L2 -5 3308 3186 2712 20 0 0 chr5_random 2131832 2132133 -1646350 - AluYa5 SINE Alu -10 301 1 761 253 142 24 chr5_random 2132871 2133167 -1645316 + MER46C DNA MER2_type 7 337 -1 905 150 35 132 chr5_random 2133563 2133633 -1644850 + AluJo SINE Alu 82 157 -155 2399 77 3 6 chr5_random 2133633 2133944 -1644539 + AluSg SINE Alu 1 310 0 905 150 35 132 chr5_random 2133944 2134100 -1644383 + AluJo SINE Alu 157 286 -26 4498 150 59 95 chr5_random 2134840 2135457 -1643026 + Looper DNA T2_type 46 601 -957 909 154 31 70 chr5_random 2135457 2135684 -1642799 - MER20 DNA MER1_type 0 219 2 4498 150 59 95 chr5_random 2135684 2136251 -1642232 + Looper DNA T2_type 601 1187 -371 612 133 80 7 chr5_random 2136268 2136418 -1642065 + Looper DNA T2_type 1340 1500 -58 279 338 281 17 chr5_random 2136473 2136775 -1641708 + L2 LINE L2 2595 2976 -338 370 331 60 18 chr5_random 2136849 2137015 -1641468 + L2 LINE L2 3137 3309 -4 22 80 0 0 chr5_random 2139326 2139376 -1639107 + AT_rich Low_complexity Low_complexity 1 50 0 23 0 0 0 chr5_random 2140537 2140560 -1637923 + AT_rich Low_complexity Low_complexity 1 23 0 686 342 31 4 chr5_random 2140824 2141052 -1637431 + MIR SINE MIR 21 254 -8 1987 154 0 0 chr5_random 2141286 2141597 -1636886 - AluJb SINE Alu -1 311 1 476 153 0 35 chr5_random 2142071 2142156 -1636327 - Tigger5 DNA MER2_type 0 2323 2242 * 1572 167 0 139 chr5_random 2142138 2142498 -1635985 - Tigger5 DNA MER2_type -2013 310 1 874 186 68 6 chr5_random 2143209 2143386 -1635097 - MER58A DNA MER1_type 0 224 37 23 0 0 0 chr5_random 2144209 2144232 -1634251 + AT_rich Low_complexity Low_complexity 1 23 0 437 245 151 72 chr5_random 2144765 2145043 -1633440 - L2 LINE L2 0 3313 3014 528 188 129 0 chr5_random 2145233 2145334 -1633149 + FLAM_A SINE Alu 8 121 -21 23 97 0 0 chr5_random 2146850 2146922 -1631561 + AT_rich Low_complexity Low_complexity 1 72 0 4825 168 70 35 chr5_random 2147511 2148613 -1629870 + Charlie1 DNA MER1_type 1621 2761 0 489 143 33 0 chr5_random 2150163 2150254 -1628229 + AluJ/FLAM SINE Alu 1 94 -218 10038 147 43 24 chr5_random 2150563 2151058 -1627425 - L1MA4A LINE L1 -6 6297 5813 360 0 0 0 chr5_random 2151058 2151098 -1627385 + (TA)n Simple_repeat Simple_repeat 2 41 0 10038 147 43 24 chr5_random 2151098 2153625 -1624858 - L1MA4A LINE L1 -490 5813 3196 44151 35 4 2 chr5_random 2153625 2159769 -1618714 + L1PA3 LINE L1 1 6155 0 2360 73 0 3 chr5_random 2159860 2160161 -1618322 + AluSq SINE Alu 1 300 -13 1975 173 25 69 chr5_random 2160332 2160736 -1617747 + MER21B LTR ERV1 467 852 -11 377 252 9 45 chr5_random 2161961 2162072 -1616411 - U6 snRNA snRNA 0 107 1 1571 170 20 31 chr5_random 2163409 2163703 -1614780 - AluJb SINE Alu -21 291 1 203 147 0 0 chr5_random 2165048 2165082 -1613401 + (CA)n Simple_repeat Simple_repeat 2 35 0 2309 190 114 85 chr5_random 2166416 2166928 -1611555 - L1ME2 LINE L1 -1 6163 5667 2651 176 44 25 chr5_random 2166928 2167478 -1611005 + MER68 LTR ERV1 3 562 0 2309 190 114 85 chr5_random 2167478 2167811 -1610672 - L1ME2 LINE L1 -497 5667 5273 1097 150 103 159 chr5_random 2167811 2168131 -1610352 - AluJb SINE Alu 0 302 1 2309 190 114 85 chr5_random 2168131 2168330 -1610153 - L1ME2 LINE L1 -891 5273 5081 2278 108 0 0 chr5_random 2168478 2168785 -1609698 + AluSx SINE Alu 3 309 -3 375 302 74 11 chr5_random 2168794 2168983 -1609500 + L1MC4a LINE L1 5097 5297 -849 823 293 117 25 chr5_random 2168988 2169517 -1608966 + L1MC4a LINE L1 5327 5904 -1904 494 264 102 35 chr5_random 2170096 2170293 -1608190 + HAL1 LINE L1 748 957 -1550 1962 279 121 20 chr5_random 2170364 2171376 -1607107 + HAL1 LINE L1 1088 2201 -306 23 33 0 0 chr5_random 2171517 2171547 -1606936 + AT_rich Low_complexity Low_complexity 1 30 0 456 246 355 4 chr5_random 2171922 2172150 -1606333 - L2 LINE L2 0 3313 3006 21 36 0 0 chr5_random 2172602 2172630 -1605853 + AT_rich Low_complexity Low_complexity 1 28 0 23 54 0 0 chr5_random 2173375 2173412 -1605071 + AT_rich Low_complexity Low_complexity 1 37 0 23 86 0 0 chr5_random 2176403 2176461 -1602022 + AT_rich Low_complexity Low_complexity 1 58 0 26 64 0 0 chr5_random 2177533 2177580 -1600903 + AT_rich Low_complexity Low_complexity 1 47 0 198 191 0 0 chr5_random 2178486 2178528 -1599955 + (TATATG)n Simple_repeat Simple_repeat 1 42 0 396 304 53 29 chr5_random 2179259 2179430 -1599053 - MIR SINE MIR 0 262 88 537 85 0 24 chr5_random 2179888 2179970 -1598513 - MADE1 DNA Mariner 0 80 1 2187 130 3 0 chr5_random 2180218 2180519 -1597964 + AluSx SINE Alu 1 302 -10 401 246 48 87 chr5_random 2183057 2183183 -1595300 - MER5A DNA MER1_type 0 189 69 246 284 172 0 chr5_random 2183104 2183220 -1595263 + MER5A DNA MER1_type 52 187 -2 * 216 353 35 43 chr5_random 2183502 2183612 -1594871 + L2 LINE L2 3158 3267 0 1945 100 24 21 chr5_random 2183612 2183902 -1594581 - AluSq SINE Alu -22 291 1 278 125 0 0 chr5_random 2184233 2184273 -1594210 + FLAM_C SINE Alu 1 40 -94 529 158 0 42 chr5_random 2185312 2185407 -1593076 + FLAM_C SINE Alu 46 136 -7 556 273 15 0 chr5_random 2186051 2186183 -1592300 + MIR SINE MIR 68 201 -61 1035 93 25 108 chr5_random 2186228 2186334 -1592149 - Tigger2 DNA MER2_type -1 2717 2634 2059 153 0 0 chr5_random 2186334 2186634 -1591849 + AluJo SINE Alu 1 300 -12 1035 93 25 108 chr5_random 2186634 2186731 -1591752 - Tigger2 DNA MER2_type -84 2634 2531 496 225 152 0 chr5_random 2186930 2187081 -1591402 + MIR SINE MIR 65 238 -24 277 286 29 9 chr5_random 2187093 2187198 -1591285 + CT-rich Low_complexity Low_complexity 1 107 0 219 69 0 0 chr5_random 2187276 2187305 -1591178 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 843 215 17 0 chr5_random 2187307 2187479 -1591004 - FRAM SINE Alu -1 175 1 195 125 0 0 chr5_random 2187828 2187868 -1590615 + (TG)n Simple_repeat Simple_repeat 2 41 0 21 0 0 0 chr5_random 2188666 2188687 -1589796 + AT_rich Low_complexity Low_complexity 1 21 0 2728 13 3 0 chr5_random 2188814 2189115 -1589368 - AluY SINE Alu -9 302 1 1988 179 22 16 chr5_random 2189234 2189597 -1588886 + MLT1A1 LTR MaLR 1 365 0 22 0 0 0 chr5_random 2189681 2189703 -1588780 + AT_rich Low_complexity Low_complexity 1 22 0 1529 178 10 58 chr5_random 2189945 2190254 -1588229 + AluJo SINE Alu 5 298 -14 225 350 17 25 chr5_random 2190321 2190441 -1588042 + MIR SINE MIR 20 138 -70 202 191 56 34 chr5_random 2192429 2192518 -1585965 + A-rich Low_complexity Low_complexity 4 94 0 2175 213 39 48 chr5_random 2192609 2193150 -1585333 - MLT1F LTR MaLR -6 536 1 237 65 0 0 chr5_random 2193637 2193668 -1584815 + (TG)n Simple_repeat Simple_repeat 2 32 0 1618 155 7 35 chr5_random 2193670 2193960 -1584523 - AluJb SINE Alu -30 282 1 23 86 0 0 chr5_random 2194029 2194087 -1584396 + AT_rich Low_complexity Low_complexity 1 58 0 304 299 51 22 chr5_random 2194853 2194990 -1583493 - MLT1J2 LTR MaLR -37 413 273 616 149 28 0 chr5_random 2195834 2195941 -1582542 - HY1 scRNA scRNA -2 110 1 761 274 28 24 chr5_random 2196700 2196952 -1581531 + HERV16 LTR ERVL 613 865 -4131 2438 80 0 3 chr5_random 2197229 2197541 -1580942 + AluY SINE Alu 1 311 0 253 298 39 0 chr5_random 2197781 2197885 -1580598 - MIR SINE MIR -57 205 98 2195 128 0 3 chr5_random 2198507 2198812 -1579671 + AluSx SINE Alu 7 310 -2 2430 97 0 0 chr5_random 2198863 2199174 -1579309 + AluY SINE Alu 1 311 0 303 119 0 0 chr5_random 2199727 2199769 -1578714 - tRNA-Leu-TTG tRNA tRNA -44 42 1 244 270 16 0 chr5_random 2199776 2199839 -1578644 - Charlie8 DNA MER1_type -2188 229 166 24 0 0 0 chr5_random 2199876 2199900 -1578583 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr5_random 2199941 2199964 -1578519 + AT_rich Low_complexity Low_complexity 1 23 0 979 226 28 5 chr5_random 2199964 2200176 -1578307 - MIR SINE MIR -38 224 8 228 138 100 88 chr5_random 2200176 2200256 -1578227 - Charlie8 DNA MER1_type -2258 159 79 1501 205 73 6 chr5_random 2200443 2200749 -1577734 + L1MC4 LINE L1 6760 7093 -949 183 100 0 0 chr5_random 2200749 2200779 -1577704 + (TAAA)n Simple_repeat Simple_repeat 4 33 0 1501 205 73 6 chr5_random 2200779 2200814 -1577669 + L1MC4 LINE L1 7093 7124 -918 1571 171 8 0 chr5_random 2200916 2201179 -1577304 - MER7C DNA MER2_type -336 266 2 2217 91 3 3 chr5_random 2202316 2202602 -1575881 + AluSx SINE Alu 2 287 -25 22 0 0 0 chr5_random 2202786 2202808 -1575675 + AT_rich Low_complexity Low_complexity 1 22 0 197 327 0 0 chr5_random 2202857 2202912 -1575571 - L2 LINE L2 -45 3268 3214 213 246 15 15 chr5_random 2203054 2203119 -1575364 + (TATATG)n Simple_repeat Simple_repeat 4 68 0 840 196 0 7 chr5_random 2203248 2203396 -1575087 - AluJo SINE Alu -150 162 16 485 345 144 30 chr5_random 2203424 2204148 -1574335 + L1ME LINE L1 4214 5019 -1127 513 226 45 23 chr5_random 2204277 2204410 -1574073 + FLAM_A SINE Alu 4 139 -3 227 358 37 0 chr5_random 2204739 2204873 -1573610 + L1ME LINE L1 5494 5632 -489 193 326 35 58 chr5_random 2205173 2205259 -1573224 + L2 LINE L2 3230 3313 0 2292 109 3 6 chr5_random 2205486 2205798 -1572685 + AluSp SINE Alu 1 311 -2 270 343 102 0 chr5_random 2206177 2206285 -1572198 - MER5A DNA MER1_type -3 186 68 820 178 18 31 chr5_random 2206287 2206450 -1572033 - FRAM SINE Alu -9 167 7 193 351 114 14 chr5_random 2206818 2207029 -1571454 + L2 LINE L2 3074 3305 -8 325 321 43 29 chr5_random 2207033 2207173 -1571310 - MIR SINE MIR -86 176 35 259 224 0 15 chr5_random 2207412 2207479 -1571004 + LTR50 LTR ERVL 3 68 -727 325 247 37 31 chr5_random 2208321 2208483 -1570000 - HAL1b LINE L1 -437 911 749 552 260 148 30 chr5_random 2209040 2209601 -1568882 - HAL1 LINE L1 -760 1747 1121 315 254 22 66 chr5_random 2210164 2210345 -1568138 - L1M4 LINE L1 -1471 5377 5205 389 292 70 41 chr5_random 2210705 2210876 -1567607 + L1M4 LINE L1 3670 3845 -2301 198 143 0 0 chr5_random 2210893 2210928 -1567555 + (TCCC)n Simple_repeat Simple_repeat 3 37 0 243 0 0 0 chr5_random 2210977 2211004 -1567479 + (CA)n Simple_repeat Simple_repeat 1 27 0 3750 255 70 26 chr5_random 2211545 2213888 -1564595 + L1M4 LINE L1 2326 4812 -1334 315 237 71 145 chr5_random 2215374 2215766 -1562717 - L1M4 LINE L1 -5553 1296 934 21 0 0 0 chr5_random 2215936 2215957 -1562526 + GC_rich Low_complexity Low_complexity 1 21 0 294 73 0 0 chr5_random 2217181 2217222 -1561261 + (TG)n Simple_repeat Simple_repeat 2 42 0 820 167 0 0 chr5_random 2218361 2218493 -1559990 + FLAM_C SINE Alu 1 132 -1 450 358 36 5 chr5_random 2218630 2218851 -1559632 - L3 LINE CR1 -1186 391 164 346 336 57 0 chr5_random 2219370 2219492 -1558991 + MER5B DNA MER1_type 1 129 -49 651 132 5 0 chr5_random 2219682 2220331 -1558152 - CER Satellite Satellite 0 652 1 670 116 1 0 chr5_random 2220370 2220936 -1557547 - CER Satellite Satellite 0 566 1 13656 43 0 4 chr5_random 2221039 2222769 -1555714 - HERVK LTR ERVK -3428 3815 2093 598 124 8 0 chr5_random 2222769 2222896 -1555587 + CER Satellite Satellite 1 128 -41 822 199 1 0 chr5_random 2223006 2223455 -1555028 + ACRO1 Satellite acromeric 1 449 -55 610 211 34 115 chr5_random 2224151 2224474 -1554009 - L1MB8 LINE L1 -42 6136 5840 717 70 0 0 chr5_random 2224530 2224630 -1553853 + (TTCC)n Simple_repeat Simple_repeat 4 103 0 286 218 0 0 chr5_random 2224932 2224987 -1553496 - Tigger5 DNA MER2_type -2268 55 1 1735 101 71 0 chr5_random 2225376 2225644 -1552839 + L1PA10 LINE L1 5863 6149 -19 186 103 0 0 chr5_random 2225644 2225673 -1552810 + (CGAAA)n Simple_repeat Simple_repeat 2 30 0 814 215 71 16 chr5_random 2225849 2226310 -1552173 - MER21B LTR ERV1 -132 799 199 214 211 132 13 chr5_random 2226562 2226638 -1551845 - MER5A DNA MER1_type -6 183 99 286 218 0 0 chr5_random 2227189 2227244 -1551239 - Tigger5 DNA MER2_type -2268 55 1 1751 97 71 0 chr5_random 2227633 2227901 -1550582 + L1PA10 LINE L1 5863 6149 -19 186 103 0 0 chr5_random 2227901 2227930 -1550553 + (CGAAA)n Simple_repeat Simple_repeat 2 30 0 1360 222 163 7 chr5_random 2228093 2228553 -1549930 - MER21B LTR ERV1 -133 730 199 187 224 132 13 chr5_random 2228805 2228881 -1549602 - MER5A DNA MER1_type -6 183 99 180 0 0 0 chr5_random 2229296 2229316 -1549167 + (TCTG)n Simple_repeat Simple_repeat 3 22 0 404 91 15 0 chr5_random 2229359 2229425 -1549058 + (CA)n Simple_repeat Simple_repeat 1 67 0 734 150 4 0 chr5_random 2229877 2234177 -1544306 + CER Satellite Satellite 1 4314 -31 780 117 2 1 chr5_random 2234189 2241598 -1536885 + CER Satellite Satellite 1 7417 0 2383 71 0 3 chr5_random 2242269 2242602 -1535881 - AluSg SINE Alu 0 332 1 1037 235 41 24 chr5_random 2243219 2243559 -1534924 + MER66A LTR ERV1 93 438 -40 1937 109 11 0 chr5_random 2243827 2244127 -1534356 - AluY SINE Alu 0 305 3 2074 126 0 0 chr5_random 2244131 2244425 -1534058 - AluSx SINE Alu -17 295 2 30 27 0 0 chr5_random 2244425 2244462 -1534021 + AT_rich Low_complexity Low_complexity 1 37 0 2133 103 0 40 chr5_random 2244587 2244908 -1533575 - AluSx SINE Alu -4 308 1 403 227 31 8 chr5_random 2245039 2245167 -1533316 + L1MB2 LINE L1 2920 3050 -3096 254 200 33 0 chr5_random 2245169 2245229 -1533254 + L1MB2 LINE L1 2989 3050 -3096 234 218 18 0 chr5_random 2245235 2245290 -1533193 + L1MB2 LINE L1 2994 3049 -3097 * 1687 246 55 16 chr5_random 2245287 2245957 -1532526 + L1MB2 LINE L1 2983 3678 -2468 * 3469 231 53 62 chr5_random 2245952 2246381 -1532102 + L1MB2 LINE L1 3935 4366 -1780 1745 167 0 50 chr5_random 2246381 2246704 -1531779 + AluSx SINE Alu 1 307 -5 3469 231 53 62 chr5_random 2246704 2246770 -1531713 + L1MB2 LINE L1 4366 4431 -1715 1890 135 0 10 chr5_random 2246770 2247073 -1531410 + AluSx SINE Alu 1 300 -12 3469 231 53 62 chr5_random 2247073 2247876 -1530607 + L1MB2 LINE L1 4431 5224 -922 1160 158 110 0 chr5_random 2247876 2248085 -1530398 - MER46A DNA MER2_type -3 233 2 3469 231 53 62 chr5_random 2248085 2248142 -1530341 + L1MB2 LINE L1 5224 5280 -866 1926 180 164 115 chr5_random 2249150 2250022 -1528461 + L1MB2 LINE L1 5280 6164 -7 26 0 0 0 chr5_random 2250023 2250049 -1528434 + AT_rich Low_complexity Low_complexity 1 26 0 1461 186 10 17 chr5_random 2250053 2250343 -1528140 - AluJb SINE Alu -24 288 1 1432 229 122 52 chr5_random 2250344 2250454 -1528029 + L1MEc LINE L1 2084 2185 -4030 1541 198 10 3 chr5_random 2250454 2250762 -1527721 + AluJb SINE Alu 1 310 -2 1432 229 122 52 chr5_random 2250762 2251538 -1526945 + L1MEc LINE L1 2185 3003 -3212 273 345 108 0 chr5_random 2251564 2251712 -1526771 + MLT1H1 LTR MaLR 3 166 -389 331 160 138 19 chr5_random 2251944 2252074 -1526409 + MLT1G1 LTR MaLR 408 595 0 691 282 199 28 chr5_random 2253190 2253693 -1524790 + MLT1H1 LTR MaLR 1 589 -1 495 245 0 5 chr5_random 2254158 2254411 -1524072 + ACRO1 Satellite acromeric 1 251 -38 1150 114 5 1 chr5_random 2254743 2256590 -1521893 + ACRO1 Satellite acromeric 1 1852 -55 314 174 62 111 chr5_random 2257286 2257430 -1521053 - L1MB8 LINE L1 -42 6136 6000 1390 132 54 18 chr5_random 2257443 2259134 -1519349 - GSATII Satellite centromeric -8 3385 1756 252 0 0 0 chr5_random 2259134 2259162 -1519321 + (TA)n Simple_repeat Simple_repeat 2 29 0 1390 132 54 18 chr5_random 2259162 2260712 -1517771 - GSATII Satellite centromeric -1637 1756 1 * 3848 157 7 7 chr5_random 2260702 2261396 -1517087 + TAR1 Satellite telomeric 1375 2068 -43 293 131 0 48 chr5_random 2261536 2261620 -1516863 + (TTAGGG)n Simple_repeat Simple_repeat 4 83 0 552 99 6 66 chr5_random 2261659 2261840 -1516643 + (TTAGGG)n Simple_repeat Simple_repeat 1 170 0 6695 223 16 100 chr5_random 2261841 2262572 -1515911 - L1P LINE L1 -927 5219 4428 1031 169 0 0 chr5_random 2262572 2262750 -1515733 - AluSp SINE Alu 0 313 136 6695 223 16 100 chr5_random 2262750 2264402 -1514081 - L1P LINE L1 -1718 4428 2873 577 241 25 25 chr5_random 2264387 2264545 -1513938 - L1M3 LINE L1 -581 5599 5442 * 245 269 0 15 chr5_random 2264531 2264598 -1513885 - L1MA8 LINE L1 -74 6217 6152 * 6026 230 66 26 chr5_random 2265730 2268144 -1510339 - L1M3 LINE L1 -570 5610 3095 544 228 0 0 chr5_random 2268706 2268807 -1509676 - AluJ/FLAM SINE Alu -210 102 2 1518 215 18 6 chr5_random 2268815 2269154 -1509329 - L1M3 LINE L1 -361 5822 5480 1730 151 6 35 chr5_random 2269315 2269633 -1508850 + AluSx SINE Alu 1 309 -3 2023 116 0 7 chr5_random 2269788 2270082 -1508401 - AluSx SINE Alu -20 292 1 2416 252 56 50 chr5_random 2270628 2270914 -1507569 - MER21B LTR ERV1 -57 806 523 1569 190 3 10 chr5_random 2270914 2271209 -1507274 - AluJo SINE Alu -11 301 9 2416 252 56 50 chr5_random 2271209 2271287 -1507196 - MER21B LTR ERV1 -340 523 447 1269 181 0 104 chr5_random 2271287 2271625 -1506858 + AluJb SINE Alu 2 304 -8 2416 252 56 50 chr5_random 2271625 2272042 -1506441 - MER21B LTR ERV1 -416 447 19 236 284 27 14 chr5_random 2272063 2272137 -1506346 - MER21B LTR ERV1 -773 90 16 1254 234 7 13 chr5_random 2272137 2272440 -1506043 - AluJo SINE Alu -11 301 1 553 206 15 22 chr5_random 2272442 2272578 -1505905 - FLAM_C SINE Alu 0 143 9 1329 186 33 66 chr5_random 2272581 2272947 -1505536 + MLT1D LTR MaLR 150 503 -2 1091 228 31 17 chr5_random 2272960 2273250 -1505233 + AluJo SINE Alu 11 304 -8 1110 259 106 12 chr5_random 2273261 2273778 -1504705 - L2 LINE L2 -218 3095 2541 686 223 0 0 chr5_random 2273869 2273999 -1504484 + FLAM_C SINE Alu 1 130 -3 954 228 20 4 chr5_random 2274063 2274317 -1504166 + AluJo SINE Alu 49 306 -6 21 0 0 0 chr5_random 2274439 2274460 -1504023 + AT_rich Low_complexity Low_complexity 1 21 0 255 206 0 93 chr5_random 2274461 2274568 -1503915 + LTR37A LTR ERV1 241 337 -89 1857 157 3 0 chr5_random 2274761 2275066 -1503417 - AluSg SINE Alu -4 306 1 1395 201 3 24 chr5_random 2275370 2275668 -1502815 - AluJo SINE Alu -10 302 11 1817 158 0 7 chr5_random 2275683 2275986 -1502497 - AluSx SINE Alu -6 306 6 2072 229 47 52 chr5_random 2276006 2276069 -1502414 - L1MB8 LINE L1 -5 6173 6111 1318 229 3 3 chr5_random 2276069 2276375 -1502108 + AluJo SINE Alu 1 306 -6 2072 229 47 52 chr5_random 2276375 2276931 -1501552 - L1MB8 LINE L1 -67 6111 5557 456 281 0 0 chr5_random 2276933 2277047 -1501436 + FLAM_C SINE Alu 2 115 -28 388 230 12 11 chr5_random 2277051 2277155 -1501328 - L1MC/D LINE L1 -598 5568 5495 1353 231 3 7 chr5_random 2277155 2277449 -1501034 - AluJb SINE Alu -19 293 1 22 73 0 15 chr5_random 2277703 2277730 -1500753 + AT_rich Low_complexity Low_complexity 1 27 -40 540 144 10 10 chr5_random 2277730 2277827 -1500656 - L1PB1 LINE L1 -2 6149 6053 22 73 0 15 chr5_random 2277827 2277867 -1500616 + AT_rich Low_complexity Low_complexity 27 67 0 1839 149 7 0 chr5_random 2278122 2278448 -1500035 - AluSx SINE Alu 0 328 1 3231 228 125 9 chr5_random 2279342 2279781 -1498702 + L1MC4 LINE L1 6563 6950 -1092 1915 138 7 3 chr5_random 2279781 2280071 -1498412 + AluSx SINE Alu 1 291 -21 3231 228 125 9 chr5_random 2280071 2280631 -1497852 + L1MC4 LINE L1 6950 7678 -364 993 270 90 24 chr5_random 2280624 2281336 -1497147 + L1M4 LINE L1 2810 3568 -2578 * 1601 214 58 0 chr5_random 2281338 2281683 -1496800 + MER47A DNA MER2_type 1 365 -1 490 297 41 48 chr5_random 2281684 2281729 -1496754 + L1M4 LINE L1 3572 3616 -2530 2172 119 3 3 chr5_random 2281729 2282041 -1496442 + AluSp SINE Alu 1 312 -1 490 297 41 48 chr5_random 2282041 2282288 -1496195 + L1M4 LINE L1 3616 3862 -2284 320 216 40 0 chr5_random 2282296 2282370 -1496113 + L1ME1 LINE L1 6086 6162 -4 21 0 0 0 chr5_random 2282373 2282394 -1496089 + AT_rich Low_complexity Low_complexity 1 21 0 25 65 0 0 chr5_random 2283339 2283385 -1495098 + AT_rich Low_complexity Low_complexity 1 46 0 259 343 44 5 chr5_random 2283650 2283854 -1494629 - L1ME LINE L1 -264 5857 5646 3815 142 8 8 chr5_random 2283873 2284495 -1493988 - L1PA15 LINE L1 0 6165 5544 2841 190 62 28 chr5_random 2284498 2285251 -1493232 - LTR1B LTR ERV1 0 785 1 1101 138 53 0 chr5_random 2285251 2285439 -1493044 - L1PA15 LINE L1 -621 5544 5347 411 116 411 0 chr5_random 2285444 2285556 -1492927 - LTR1B LTR ERV1 -242 584 427 1289 202 39 0 chr5_random 2285597 2285904 -1492579 - L1PA15 LINE L1 -864 5282 4964 2430 177 109 17 chr5_random 2285904 2288826 -1489657 - SATR1 Satellite Satellite -4 3189 1 1929 181 145 0 chr5_random 2288842 2289250 -1489233 + SATR1 Satellite Satellite 1 467 -3 1724 206 123 1 chr5_random 2289281 2289757 -1488726 + SATR1 Satellite Satellite 1 533 -105 223 200 17 0 chr5_random 2289923 2289983 -1488500 + (TA)n Simple_repeat Simple_repeat 1 61 0 2273 162 119 16 chr5_random 2292684 2292734 -1485749 - SATR1 Satellite Satellite -46 2350 2307 2402 74 0 0 chr5_random 2292734 2293032 -1485451 - AluY SINE Alu -13 298 1 2273 162 119 16 chr5_random 2293032 2294813 -1483670 - SATR1 Satellite Satellite -89 2307 1 1364 182 32 50 chr5_random 2294821 2295222 -1483261 + MLT2B3 LTR ERVL 176 554 0 36 23 0 0 chr5_random 2296103 2296146 -1482337 + AT_rich Low_complexity Low_complexity 1 43 0 264 128 51 64 chr5_random 2296191 2296269 -1482214 - AluJb SINE Alu -185 117 41 23 0 0 0 chr5_random 2296584 2296607 -1481876 + AT_rich Low_complexity Low_complexity 1 23 0 1064 144 127 50 chr5_random 2296762 2297061 -1481422 + MER33 DNA MER1_type 1 322 -2 959 143 31 0 chr5_random 2298977 2299138 -1479345 - MER68 LTR ERV1 -396 166 1 21 57 0 0 chr5_random 2299171 2299206 -1479277 + AT_rich Low_complexity Low_complexity 1 35 0 33 0 0 0 chr5_random 2299540 2299573 -1478910 + AT_rich Low_complexity Low_complexity 1 33 0 2012 147 3 0 chr5_random 2299684 2300004 -1478479 - AluSq SINE Alu 0 321 1 2098 139 0 0 chr5_random 2300070 2300365 -1478118 - AluSx SINE Alu -17 295 1 2352 158 0 41 chr5_random 2300374 2300812 -1477671 - L1MC1 LINE L1 0 6333 5914 729 179 45 0 chr5_random 2301840 2301974 -1476509 - Tigger7 DNA MER2_type 0 2491 2352 673 143 52 39 chr5_random 2301980 2302134 -1476349 + MER21A LTR ERV1 747 902 -29 234 0 0 0 chr5_random 2302524 2302550 -1475933 + (CAA)n Simple_repeat Simple_repeat 2 27 0 634 219 0 24 chr5_random 2302587 2302710 -1475773 - FLAM_A SINE Alu -17 125 6 195 387 81 14 chr5_random 2302866 2303088 -1475395 - MIR SINE MIR -6 256 20 246 299 149 9 chr5_random 2303694 2303801 -1474682 - MIR SINE MIR -121 141 20 536 232 0 0 chr5_random 2306151 2306250 -1472233 + FLAM_A SINE Alu 1 99 -43 1883 143 0 31 chr5_random 2306503 2306818 -1471665 + AluSx SINE Alu 1 306 0 1081 230 32 57 chr5_random 2307001 2307284 -1471199 - AluJb SINE Alu -24 288 13 6322 52 1 0 chr5_random 2307656 2308433 -1470050 - L1PA5 LINE L1 -1 6153 5376 1553 201 0 11 chr5_random 2308818 2309101 -1469382 - AluJb SINE Alu -30 282 3 1330 236 0 24 chr5_random 2309135 2309431 -1469052 + AluJo SINE Alu 1 289 -23 2319 86 0 0 chr5_random 2309628 2309919 -1468564 + AluY SINE Alu 3 293 -18 251 171 195 12 chr5_random 2310733 2310815 -1467668 - MER5A DNA MER1_type -83 106 10 1880 159 0 0 chr5_random 2314016 2314318 -1464165 - AluSx SINE Alu -4 308 7 2042 127 10 0 chr5_random 2316091 2316382 -1462101 + AluSp SINE Alu 2 295 -18 1950 152 7 0 chr5_random 2316856 2317153 -1461330 + AluSx SINE Alu 5 303 -9 206 225 0 0 chr5_random 2317435 2317475 -1461008 + L2 LINE L2 3262 3301 -12 1296 255 31 3 chr5_random 2317694 2317988 -1460495 - AluJo SINE Alu -10 302 1 581 82 24 0 chr5_random 2320718 2320803 -1457680 + L1PA5 LINE L1 6066 6152 -2 30 59 0 0 chr5_random 2322569 2322620 -1455863 + AT_rich Low_complexity Low_complexity 1 51 0 2019 142 0 3 chr5_random 2322805 2323108 -1455375 - AluSq SINE Alu -11 302 1 473 276 55 24 chr5_random 2323222 2323453 -1455030 + L1MB7 LINE L1 5396 5643 -478 712 249 45 15 chr5_random 2326542 2326743 -1451740 + L1MB7 LINE L1 5903 6109 -75 728 100 0 0 chr5_random 2326894 2327220 -1451263 + CER Satellite Satellite 1 326 -37 916 199 16 5 chr5_random 2327232 2327423 -1451060 + AluJb SINE Alu 119 311 -1 1384 229 131 53 chr5_random 2327434 2328200 -1450283 + L1M4 LINE L1 2110 2934 -3212 259 345 108 0 chr5_random 2328226 2328374 -1450109 + MLT1H1 LTR MaLR 3 166 -389 324 135 171 12 chr5_random 2328606 2328736 -1449747 + MLT1G1 LTR MaLR 408 595 0 691 284 199 28 chr5_random 2329854 2330357 -1448126 + MLT1H1 LTR MaLR 1 589 -1 574 210 0 0 chr5_random 2330818 2331074 -1447409 + ACRO1 Satellite acromeric 1 256 -38 1142 121 3 1 chr5_random 2331406 2332962 -1445521 + ACRO1 Satellite acromeric 1 1559 -55 745 195 37 118 chr5_random 2333658 2333981 -1444502 - L1MB8 LINE L1 -42 6136 5840 651 90 0 0 chr5_random 2334037 2334137 -1444346 + (TTCC)n Simple_repeat Simple_repeat 4 103 0 323 200 0 0 chr5_random 2334439 2334494 -1443989 - Tigger5 DNA MER2_type -2268 55 1 1761 104 71 0 chr5_random 2334883 2335151 -1443332 + L1PA10 LINE L1 5863 6149 -19 186 103 0 0 chr5_random 2335151 2335180 -1443303 + (CGAAA)n Simple_repeat Simple_repeat 2 30 0 892 220 71 16 chr5_random 2335356 2335817 -1442666 - MER21B LTR ERV1 -132 799 199 234 224 132 13 chr5_random 2336069 2336145 -1442338 - MER5A DNA MER1_type -6 183 99 234 0 0 0 chr5_random 2336562 2336588 -1441895 + (TCTG)n Simple_repeat Simple_repeat 3 28 0 437 76 15 0 chr5_random 2336631 2336697 -1441786 + (CA)n Simple_repeat Simple_repeat 1 67 0 602 218 0 0 chr5_random 2337118 2337374 -1441109 + ACRO1 Satellite acromeric 1 256 -38 1175 117 3 1 chr5_random 2337706 2339237 -1439246 + ACRO1 Satellite acromeric 1 1534 -6 879 231 52 4 chr5_random 2339236 2339626 -1438857 - MER21B LTR ERV1 -213 672 199 * 235 246 31 15 chr5_random 2339878 2339943 -1438540 - MER5A DNA MER1_type -6 183 118 234 0 0 0 chr5_random 2340371 2340397 -1438086 + (TCTG)n Simple_repeat Simple_repeat 3 28 0 401 81 16 0 chr5_random 2340440 2340502 -1437981 + (CA)n Simple_repeat Simple_repeat 1 63 0 602 207 0 0 chr5_random 2340923 2341179 -1437304 + ACRO1 Satellite acromeric 1 256 -38 1142 114 4 1 chr5_random 2341511 2343358 -1435125 + ACRO1 Satellite acromeric 1 1852 -55 745 195 37 118 chr5_random 2344054 2344377 -1434106 - L1MB8 LINE L1 -42 6136 5840 651 90 0 0 chr5_random 2344433 2344533 -1433950 + (TTCC)n Simple_repeat Simple_repeat 4 103 0 323 200 0 0 chr5_random 2344835 2344890 -1433593 - Tigger5 DNA MER2_type -2268 55 1 1778 101 71 0 chr5_random 2345279 2345547 -1432936 + L1PA10 LINE L1 5863 6149 -19 186 103 0 0 chr5_random 2345547 2345576 -1432907 + (CGAAA)n Simple_repeat Simple_repeat 2 30 0 914 217 71 16 chr5_random 2345752 2346213 -1432270 - MER21B LTR ERV1 -132 799 199 234 224 132 13 chr5_random 2346465 2346541 -1431942 - MER5A DNA MER1_type -6 183 99 234 0 0 0 chr5_random 2346958 2346984 -1431499 + (TCTG)n Simple_repeat Simple_repeat 3 28 0 437 76 15 0 chr5_random 2347027 2347093 -1431390 + (CA)n Simple_repeat Simple_repeat 1 67 0 602 213 0 0 chr5_random 2347514 2347770 -1430713 + ACRO1 Satellite acromeric 1 256 -38 1141 122 3 2 chr5_random 2348102 2349660 -1428823 + ACRO1 Satellite acromeric 1 1560 -55 692 201 43 122 chr5_random 2350350 2350679 -1427804 - L1MB8 LINE L1 -36 6142 5840 258 260 0 0 chr5_random 2350734 2350834 -1427649 + CT-rich Low_complexity Low_complexity 2 101 0 420 325 51 13 chr5_random 2352358 2352515 -1425968 - L2 LINE L2 -430 2884 2722 23 33 0 0 chr5_random 2352728 2352758 -1425725 + AT_rich Low_complexity Low_complexity 1 30 0 1678 218 77 49 chr5_random 2353582 2354092 -1424391 - L1MB8 LINE L1 -2 6176 5653 187 250 50 0 chr5_random 2355104 2355164 -1423319 - MIR SINE MIR -2 260 198 1270 181 0 41 chr5_random 2355187 2355453 -1423030 + AluJb SINE Alu 38 292 -20 2030 139 7 0 chr5_random 2355872 2356182 -1422301 + AluSx SINE Alu 1 312 0 659 128 11 0 chr5_random 2356533 2356627 -1421856 + AluSg SINE Alu 3 97 -213 2956 121 26 7 chr5_random 2356628 2357082 -1421401 - L1PA10 LINE L1 -51 6117 5655 1178 222 100 28 chr5_random 2357177 2357538 -1420945 - MER4E LTR ERV1 -391 388 2 1235 211 68 12 chr5_random 2357759 2358082 -1420401 - L1MB8 LINE L1 -5 6173 5833 2005 146 94 7 chr5_random 2358082 2358487 -1419996 - MER61C LTR ERV1 0 434 11 2338 193 51 44 chr5_random 2358496 2359546 -1418937 - L1MB8 LINE L1 -342 5836 4776 667 298 102 17 chr5_random 2360882 2361268 -1417215 - MLT1G1 LTR MaLR -23 572 79 1382 167 65 0 chr5_random 2361304 2361580 -1416903 - L1MA5 LINE L1 -6 6294 6001 1078 211 22 95 chr5_random 2361587 2361904 -1416579 - AluJo SINE Alu -8 294 1 2936 221 36 17 chr5_random 2361905 2363004 -1415479 - L1MA5 LINE L1 -354 5946 4828 1262 186 39 29 chr5_random 2363290 2363570 -1414913 - AluJo SINE Alu -24 288 6 306 0 0 0 chr5_random 2364380 2364414 -1414069 + (TA)n Simple_repeat Simple_repeat 1 34 0 243 0 0 0 chr5_random 2364413 2364440 -1414043 + (GA)n Simple_repeat Simple_repeat 2 28 0 * 357 256 0 0 chr5_random 2366036 2366126 -1412357 - L1MA9 LINE L1 -49 6263 6174 1901 154 0 0 chr5_random 2367328 2367626 -1410857 - AluSg SINE Alu -12 298 1 1760 159 17 0 chr5_random 2368072 2368367 -1410116 + AluSx SINE Alu 1 300 -12 4255 188 29 26 chr5_random 2368403 2369541 -1408942 + L1PA16 LINE L1 5026 6165 -1 1874 143 0 0 chr5_random 2369712 2369992 -1408491 - AluSc SINE Alu -29 280 1 21 0 0 0 chr5_random 2370354 2370375 -1408108 + AT_rich Low_complexity Low_complexity 1 21 0 231 288 163 58 chr5_random 2370807 2371138 -1407345 + L2 LINE L2 2745 3106 -166 910 191 38 25 chr5_random 2371938 2372173 -1406310 - L1MC4 LINE L1 -668 7374 7137 808 243 22 0 chr5_random 2372215 2372396 -1406087 - L1MC4 LINE L1 -1039 7003 6819 303 236 0 62 chr5_random 2372997 2373169 -1405314 - HSAT5 Satellite Satellite -1 161 1 287 225 8 43 chr5_random 2373329 2373504 -1404979 - HSAT5 Satellite Satellite 0 168 1 239 200 0 14 chr5_random 2373930 2374000 -1404483 + (CA)n Simple_repeat Simple_repeat 2 70 0 2039 97 60 47 chr5_random 2374287 2374669 -1403814 - SN5 Other centromeric -68 387 1 1610 219 52 3 chr5_random 2375713 2376056 -1402427 + MSTA LTR MaLR 9 368 -60 1337 171 17 0 chr5_random 2376085 2376319 -1402164 + MSTA-int LTR MaLR 13 250 -1401 * 1364 171 8 12 chr5_random 2376316 2376568 -1401915 + MSTA-int LTR MaLR 1401 1651 0 993 256 13 40 chr5_random 2376568 2376877 -1401606 + MSTA LTR MaLR 1 282 -82 391 193 0 12 chr5_random 2377187 2377286 -1401197 - HSAT5 Satellite Satellite -3 97 1 656 113 0 32 chr5_random 2377447 2377632 -1400851 - HSAT5 Satellite Satellite 0 179 1 269 180 10 160 chr5_random 2377648 2377748 -1400735 - HSAT5 Satellite Satellite -1 85 1 754 104 0 10 chr5_random 2378094 2379559 -1398924 + CER Satellite Satellite 1 1450 -6 720 219 7 0 chr5_random 2379550 2379687 -1398796 + MLT1A1 LTR MaLR 226 363 -2 * 3144 191 104 76 chr5_random 2379689 2381131 -1397352 + L1MCa LINE L1 723 2205 -4221 258 146 52 52 chr5_random 2381130 2381226 -1397257 + L1MCa LINE L1 2104 2199 -4227 * 1446 163 55 22 chr5_random 2381230 2381592 -1396891 + L1MCa LINE L1 2104 2477 -3949 11018 155 55 40 chr5_random 2381603 2382313 -1396170 + Tigger1 DNA MER2_type 1 699 -1719 2286 96 0 19 chr5_random 2382313 2382627 -1395856 - AluSp SINE Alu -5 308 1 11018 155 55 40 chr5_random 2382627 2383484 -1394999 + Tigger1 DNA MER2_type 699 1542 -876 1856 132 38 10 chr5_random 2383484 2383773 -1394710 + AluSg SINE Alu 1 297 -13 11018 155 55 40 chr5_random 2383773 2384363 -1394120 + Tigger1 DNA MER2_type 1542 2201 -217 1193 198 123 22 chr5_random 2384363 2384631 -1393852 + AluJo SINE Alu 1 295 -7 11018 155 55 40 chr5_random 2384631 2384849 -1393634 + Tigger1 DNA MER2_type 2201 2414 -4 2379 89 0 0 chr5_random 2384916 2385209 -1393274 - AluY SINE Alu -18 293 1 438 20 0 0 chr5_random 2385397 2385448 -1393035 + (CA)n Simple_repeat Simple_repeat 2 52 0 2098 109 11 0 chr5_random 2385497 2385796 -1392687 - AluY SINE Alu 0 304 3 2164 133 0 0 chr5_random 2385800 2386094 -1392389 - AluSx SINE Alu -17 295 2 38 0 0 0 chr5_random 2386094 2386132 -1392351 + AT_rich Low_complexity Low_complexity 1 38 0 2125 110 6 41 chr5_random 2386255 2386572 -1391911 - AluSx SINE Alu -6 306 1 351 240 24 8 chr5_random 2386705 2386830 -1391653 + L1MCa LINE L1 3200 3326 -3100 1473 261 45 12 chr5_random 2386830 2387504 -1390979 + L1MCa LINE L1 3263 3958 -2468 * 3145 231 53 65 chr5_random 2387499 2387927 -1390556 + L1MCa LINE L1 4215 4647 -1779 1876 164 0 50 chr5_random 2387927 2388250 -1390233 + AluSx SINE Alu 1 307 -5 3145 231 53 65 chr5_random 2388250 2388321 -1390162 + L1MCa LINE L1 4647 4717 -1709 2061 131 0 7 chr5_random 2388321 2388619 -1389864 + AluSx SINE Alu 1 296 -16 3145 231 53 65 chr5_random 2388619 2389423 -1389060 + L1MCa LINE L1 4717 5504 -922 1119 163 110 0 chr5_random 2389423 2389632 -1388851 - MER46A DNA MER2_type -3 233 2 3145 231 53 65 chr5_random 2389632 2389689 -1388794 + L1MCa LINE L1 5504 5560 -866 2112 187 172 52 chr5_random 2390719 2391509 -1386974 + L1MB2 LINE L1 5285 6169 -2 22 0 0 0 chr5_random 2391509 2391531 -1386952 + AT_rich Low_complexity Low_complexity 1 22 0 1599 190 7 14 chr5_random 2391535 2391825 -1386658 - AluJb SINE Alu -24 288 1 430 196 9 54 chr5_random 2391937 2392049 -1386434 + FLAM_C SINE Alu 1 107 -36 1018 239 130 56 chr5_random 2392173 2392936 -1385547 + L1M4 LINE L1 2116 2934 -3212 282 285 159 58 chr5_random 2392962 2393239 -1385244 + MLT1H1 LTR MaLR 3 307 -248 293 67 0 22 chr5_random 2393877 2393922 -1384561 + (GAAAA)n Simple_repeat Simple_repeat 2 45 0 646 287 60 19 chr5_random 2394526 2394791 -1383692 + MLT1H1 LTR MaLR 1 276 -279 262 245 103 52 chr5_random 2394861 2395016 -1383467 + MLT1H1 LTR MaLR 366 528 -2 2203 110 7 7 chr5_random 2395758 2396067 -1382416 + AluSq SINE Alu 1 309 -4 2233 126 15 105 chr5_random 2396463 2396940 -1381543 + MER57B LTR ERV1 1 434 0 1240 242 157 0 chr5_random 2397080 2397597 -1380886 + MER52A LTR ERV1 1 658 -1097 3860 165 34 18 chr5_random 2397619 2398343 -1380140 + MER52A LTR ERV1 977 1755 0 3763 139 37 35 chr5_random 2398343 2399257 -1379226 + MER52A-int LTR ERV1 88 1004 -4942 2006 125 3 3 chr5_random 2399281 2399578 -1378905 + AluSp SINE Alu 1 297 -16 295 138 116 15 chr5_random 2399580 2399671 -1378812 + MER57B-int LTR ERV1 3680 4468 -2147 40878 48 3 2 chr5_random 2399671 2405817 -1372666 + L1PA2 LINE L1 1 6154 -1 3010 130 70 3 chr5_random 2405828 2406161 -1372322 + MER57B-int LTR ERV1 4584 4972 -2565 2207 100 7 0 chr5_random 2406161 2406451 -1372032 - AluY SINE Alu -15 296 5 3010 130 70 3 chr5_random 2406451 2406688 -1371795 + MER57B-int LTR ERV1 4972 5192 -2345 729 227 71 8 chr5_random 2406758 2406996 -1371487 + AluSq SINE Alu 1 253 -60 22 35 0 0 chr5_random 2407024 2407053 -1371430 + AT_rich Low_complexity Low_complexity 1 29 0 1264 140 6 0 chr5_random 2407217 2407395 -1371088 + AluSg/x SINE Alu 114 292 -20 5935 125 18 5 chr5_random 2407401 2408353 -1370130 + MER57B-int LTR ERV1 5223 6186 -1351 2224 152 35 8 chr5_random 2408347 2408743 -1369740 + MER57B-int LTR ERV1 6661 7067 -470 * 685 146 9 0 chr5_random 2409939 2410049 -1368434 + MER57B-int LTR ERV1 7032 7142 -395 2252 113 0 0 chr5_random 2410049 2410342 -1368141 - AluY SINE Alu -17 294 2 448 124 177 35 chr5_random 2410357 2410415 -1368068 + LTR54B LTR ERV1 3 51 -447 195 42 0 0 chr5_random 2410415 2410439 -1368044 + (CAAAC)n Simple_repeat Simple_repeat 1 24 0 448 124 177 35 chr5_random 2410439 2410493 -1367990 + LTR54B LTR ERV1 51 131 -367 1300 131 131 0 chr5_random 2410493 2410722 -1367761 + MER57B-int LTR ERV1 7279 7537 0 2252 145 90 2 chr5_random 2410722 2411121 -1367362 + MER57B LTR ERV1 1 434 0 262 159 0 0 chr5_random 2411162 2411206 -1367277 + LTR6A LTR ERV1 1 44 -520 3512 121 5 11 chr5_random 2411213 2411769 -1366714 + LTR6A LTR ERV1 12 564 0 22 35 0 0 chr5_random 2412875 2412904 -1365579 + AT_rich Low_complexity Low_complexity 1 29 0 307 245 33 59 chr5_random 2413389 2413637 -1364846 + MLT1H LTR MaLR 311 549 0 1938 162 7 0 chr5_random 2415135 2415432 -1363051 + AluSx SINE Alu 1 299 -13 1853 187 3 0 chr5_random 2415540 2415850 -1362633 - AluJb SINE Alu -1 311 1 887 219 68 14 chr5_random 2415895 2416173 -1362310 - LOR1-int LTR ERV1 -2577 4021 3729 471 205 62 62 chr5_random 2416576 2417031 -1361452 - LOR1-int LTR ERV1 -2478 4309 1547 1630 117 0 13 chr5_random 2417031 2417261 -1361222 - AluSq SINE Alu -24 289 63 1822 148 0 4 chr5_random 2417481 2417752 -1360731 - AluSx SINE Alu -12 300 31 15628 50 2 1 chr5_random 2418267 2421011 -1357472 + L1PA4 LINE L1 3409 6153 -2 308 345 18 35 chr5_random 2421648 2421819 -1356664 + L1ME LINE L1 5413 5580 -582 267 122 0 0 chr5_random 2422156 2422205 -1356278 + (CA)n Simple_repeat Simple_repeat 1 49 0 182 232 29 0 chr5_random 2422210 2422279 -1356204 + (CATATA)n Simple_repeat Simple_repeat 4 74 0 1623 195 67 3 chr5_random 2422279 2422623 -1355860 + MER47A DNA MER2_type 1 366 0 2066 154 3 0 chr5_random 2422726 2423037 -1355446 + AluSx SINE Alu 1 312 0 523 255 119 17 chr5_random 2423305 2423540 -1354943 + MER20B DNA MER1_type 119 377 -406 264 292 108 25 chr5_random 2423975 2424335 -1354148 + MER20B DNA MER1_type 394 783 0 240 321 93 0 chr5_random 2424335 2424471 -1354012 - MLT1L LTR MaLR -460 155 7 266 360 112 12 chr5_random 2424946 2425107 -1353376 - L3 LINE CR1 -1215 362 186 377 333 72 0 chr5_random 2426815 2427010 -1351473 - MIR SINE MIR -24 238 30 486 317 96 35 chr5_random 2427022 2427252 -1351231 + MIR SINE MIR 2 245 -17 995 168 58 13 chr5_random 2427868 2428094 -1350389 - L1MB3 LINE L1 -1 6182 5947 374 322 112 39 chr5_random 2428736 2428941 -1349542 - L2 LINE L2 -49 3223 3004 816 211 0 0 chr5_random 2429862 2430037 -1348446 + AluSp SINE Alu 136 310 -3 2817 241 11 9 chr5_random 2430038 2430781 -1347702 + L1 LINE L1 4476 5219 -927 552 99 6 66 chr5_random 2430782 2430963 -1347520 + (CCCTAA)n Simple_repeat Simple_repeat 1 170 0 300 145 0 36 chr5_random 2431002 2431085 -1347398 + (CCCTAA)n Simple_repeat Simple_repeat 4 83 0 3556 161 9 9 chr5_random 2431225 2431890 -1346593 - TAR1 Satellite telomeric -43 2068 1404 1419 141 50 19 chr5_random 2431880 2435135 -1343348 + GSATII Satellite centromeric 1 3354 -64 * 359 167 60 107 chr5_random 2435148 2435298 -1343185 + L1MB8 LINE L1 6000 6142 -36 1129 118 4 1 chr5_random 2435989 2437545 -1340938 - ACRO1 Satellite acromeric 0 1560 1 590 219 3 0 chr5_random 2437869 2438131 -1340352 - ACRO1 Satellite acromeric 0 262 1 382 87 14 14 chr5_random 2438552 2438621 -1339862 + (TG)n Simple_repeat Simple_repeat 1 69 0 202 246 31 15 chr5_random 2439109 2439174 -1339309 + MER5A DNA MER1_type 118 183 -6 856 181 84 0 chr5_random 2439426 2439592 -1338891 + MER21B LTR ERV1 199 378 -485 630 208 0 0 chr5_random 2440012 2440268 -1338215 + ACRO1 Satellite acromeric 1 256 -38 1118 116 4 1 chr5_random 2440600 2442447 -1336036 + ACRO1 Satellite acromeric 1 1852 -55 736 210 36 116 chr5_random 2443137 2443466 -1335017 - L1MB8 LINE L1 -36 6142 5840 789 65 0 0 chr5_random 2443522 2443630 -1334853 + (TTCC)n Simple_repeat Simple_repeat 4 111 0 943 234 40 29 chr5_random 2443837 2444183 -1334300 + MER66A LTR ERV1 89 438 -40 759 272 12 0 chr5_random 2444764 2445014 -1333469 - L1M4 LINE L1 -1746 4400 4148 2442 62 0 20 chr5_random 2445142 2445447 -1333036 + AluY SINE Alu 1 299 -12 8237 154 54 28 chr5_random 2445447 2445873 -1332610 + L1MA3 LINE L1 2968 3381 -2924 2101 124 14 0 chr5_random 2445873 2446164 -1332319 + AluSx SINE Alu 1 295 -17 8237 154 54 28 chr5_random 2446164 2447532 -1330951 + L1MA3 LINE L1 3381 4711 -1594 1975 88 4 11 chr5_random 2447532 2447792 -1330691 - AluY SINE Alu -15 296 39 8237 154 54 28 chr5_random 2447792 2448220 -1330263 + L1MA3 LINE L1 4711 5126 -1179 1535 201 55 3 chr5_random 2448220 2448513 -1329970 + AluJb SINE Alu 1 308 -4 8237 154 54 28 chr5_random 2448513 2449162 -1329321 + L1MA3 LINE L1 5126 6008 -297 2974 169 46 8 chr5_random 2449162 2449687 -1328796 - MER52A LTR ERV1 0 1755 1211 22 0 0 0 chr5_random 2450466 2450488 -1327995 + AT_rich Low_complexity Low_complexity 1 22 0 2198 132 43 3 chr5_random 2450506 2450877 -1327606 - LTR49-int LTR ERV1 -639 5692 5307 13669 104 21 3 chr5_random 2450889 2456073 -1322410 - L1PA7 LINE L1 -7 6462 1135 617 141 0 0 chr5_random 2456049 2456141 -1322342 - L1PA7 LINE L1 -6365 96 5 * 3538 179 45 102 chr5_random 2456144 2456923 -1321560 - LTR49-int LTR ERV1 -1013 5318 4667 1651 191 3 10 chr5_random 2456923 2457216 -1321267 - AluJb SINE Alu -20 292 2 3538 179 45 102 chr5_random 2457216 2457536 -1320947 - LTR49-int LTR ERV1 -1664 4667 4330 1053 196 9 18 chr5_random 2457644 2457864 -1320619 + AluJo SINE Alu 72 289 -23 2292 157 30 9 chr5_random 2457869 2458333 -1320150 - LTR49-int LTR ERV1 -6637 1483 1010 1696 170 3 50 chr5_random 2458343 2458660 -1319823 + AluJb SINE Alu 3 304 -8 715 248 52 29 chr5_random 2458687 2458897 -1319586 - LTR57-int LTR ERVL -4768 575 361 1953 176 0 0 chr5_random 2458897 2459199 -1319284 + AluSx SINE Alu 1 302 -10 198 136 0 0 chr5_random 2459199 2459243 -1319240 + (TA)n Simple_repeat Simple_repeat 1 44 0 1536 152 0 0 chr5_random 2459243 2459460 -1319023 + AluSx SINE Alu 1 217 -95 321 279 19 19 chr5_random 2459736 2459840 -1318643 - LTR49-int LTR ERV1 -3811 2520 2417 2045 133 13 0 chr5_random 2460234 2460535 -1317948 - AluSp SINE Alu -8 305 1 1834 77 0 0 chr5_random 2460651 2460871 -1317612 - AluY SINE Alu -91 220 1 2006 121 22 19 chr5_random 2460905 2461227 -1317256 - HERVK9 LTR ERVK -1011 4905 4583 1975 39 0 0 chr5_random 2461228 2461458 -1317025 - HERVK9 LTR ERVK -1976 3940 3711 20429 117 5 9 chr5_random 2461458 2464255 -1314228 - HERVK9 LTR ERVK -3130 2786 1 3158 81 148 5 chr5_random 2464255 2464702 -1313781 - MER9 LTR ERVK 0 511 1 12837 93 3 1 chr5_random 2464703 2466385 -1312098 - HERVK14 LTR ERVK -4056 1889 205 640 119 20 0 chr5_random 2466379 2466480 -1312003 - HERVK14 LTR ERVK -5842 103 1 * 1930 66 0 2 chr5_random 2466480 2466764 -1311719 - LTR14A LTR ERVK 0 344 1 2980 221 45 18 chr5_random 2466769 2467105 -1311378 + L1MB1 LINE L1 4060 4385 -1761 198 0 0 0 chr5_random 2467105 2467127 -1311356 + (TAAAA)n Simple_repeat Simple_repeat 2 23 0 2980 221 45 18 chr5_random 2467127 2467563 -1310920 + L1MB1 LINE L1 4385 4853 -1293 779 315 68 10 chr5_random 2467568 2467876 -1310607 - LTR40a LTR ERVL -192 327 2 870 139 7 0 chr5_random 2468176 2468327 -1310156 - L1PB1 LINE L1 0 6151 6000 252 116 23 0 chr5_random 2468741 2468784 -1309699 + MADE1 DNA Mariner 34 77 -3 1912 158 20 130 chr5_random 2469046 2469546 -1308937 + MER65A LTR ERV1 1 445 0 754 306 111 16 chr5_random 2470862 2471222 -1307261 - LTR16A LTR ERVL -8 442 44 270 0 0 0 chr5_random 2471906 2471936 -1306547 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 2180 100 0 0 chr5_random 2471938 2472209 -1306274 - AluSc SINE Alu -31 278 8 209 143 24 24 chr5_random 2473411 2473453 -1305030 - MER5B DNA MER1_type -136 42 1 562 269 39 22 chr5_random 2474453 2474635 -1303848 - L1MEc LINE L1 -2011 4204 4020 3128 158 55 13 chr5_random 2474651 2475267 -1303216 + L1MB1 LINE L1 5338 5979 -189 1353 260 125 43 chr5_random 2475305 2476310 -1302173 - L1MEc LINE L1 -2477 3738 2651 1431 297 118 34 chr5_random 2476347 2476617 -1301866 - L1MEc LINE L1 -3875 2521 2275 2479 57 7 0 chr5_random 2476617 2476918 -1301565 - AluY SINE Alu -8 303 1 1431 297 118 34 chr5_random 2476918 2478285 -1300198 - L1MEc LINE L1 -4121 2275 745 1977 51 16 0 chr5_random 2480797 2481050 -1297433 + L1PA4 LINE L1 5897 6153 -2 22 0 0 0 chr5_random 2481203 2481225 -1297258 + AT_rich Low_complexity Low_complexity 1 22 0 1820 165 3 75 chr5_random 2482968 2483343 -1295140 - MER7A DNA MER2_type 0 346 1 333 0 0 0 chr5_random 2483840 2483877 -1294606 + (TG)n Simple_repeat Simple_repeat 2 38 0 1231 125 0 0 chr5_random 2484288 2484456 -1294027 - AluY SINE Alu -17 294 127 348 332 112 39 chr5_random 2485246 2485451 -1293032 + L2 LINE L2 3004 3223 -49 1051 181 49 4 chr5_random 2486093 2486319 -1292164 + L1MB3 LINE L1 5947 6182 -1 479 317 96 35 chr5_random 2486938 2487168 -1291315 - MIR SINE MIR -17 245 2 420 313 72 0 chr5_random 2487180 2487375 -1291108 + MIR SINE MIR 30 238 -24 248 366 112 12 chr5_random 2489078 2489239 -1289244 + L3 LINE CR1 186 362 -1215 283 333 90 0 chr5_random 2489709 2489849 -1288634 + MLT1L LTR MaLR 3 155 -460 333 292 128 44 chr5_random 2489849 2490209 -1288274 - MER20B DNA MER1_type 0 783 394 227 257 0 92 chr5_random 2490527 2490636 -1287847 + LTR33 LTR ERVL 415 513 -8 525 268 119 17 chr5_random 2490644 2490879 -1287604 - MER20B DNA MER1_type -406 377 119 2014 149 10 0 chr5_random 2491153 2491461 -1287022 - AluSx SINE Alu -1 311 1 1670 194 64 6 chr5_random 2491572 2491918 -1286565 - MER47A DNA MER2_type 0 366 1 183 254 0 0 chr5_random 2491922 2491985 -1286498 + (TATG)n Simple_repeat Simple_repeat 2 64 0 209 179 0 0 chr5_random 2491992 2492031 -1286452 + (TG)n Simple_repeat Simple_repeat 1 39 0 251 333 23 0 chr5_random 2492372 2492459 -1286024 - L1ME LINE L1 -586 5576 5488 41984 57 4 0 chr5_random 2493176 2499305 -1279178 - L1PA4 LINE L1 -2 6153 1 22 0 0 0 chr5_random 2500335 2500357 -1278126 + AT_rich Low_complexity Low_complexity 1 22 0 3513 63 2 0 chr5_random 2500664 2501121 -1277362 + L1PA5 LINE L1 5697 6154 0 302 250 0 0 chr5_random 2501328 2501388 -1277095 + MER117 DNA MER1_type 98 157 -40 1793 176 3 6 chr5_random 2502723 2503036 -1275447 + AluSx SINE Alu 1 312 0 1808 145 0 4 chr5_random 2503223 2503492 -1274991 - AluSx SINE Alu -14 298 31 404 266 19 39 chr5_random 2506472 2506626 -1271857 + L2 LINE L2 619 769 -2545 1399 211 105 31 chr5_random 2506644 2507033 -1271450 - MER21B LTR ERV1 -58 805 388 560 183 16 191 chr5_random 2507071 2507317 -1271166 - MER21B LTR ERV1 -641 222 20 595 266 21 16 chr5_random 2507332 2507520 -1270963 - MER5A DNA MER1_type 0 189 1 1222 303 136 14 chr5_random 2507529 2508175 -1270308 + L2 LINE L2 811 1535 -1779 200 269 215 11 chr5_random 2508187 2508280 -1270203 - MIR SINE MIR -109 153 42 1797 169 3 10 chr5_random 2508555 2508863 -1269620 - AluSx SINE Alu -6 306 1 318 233 0 0 chr5_random 2510204 2510264 -1268219 - MER117 DNA MER1_type -40 157 98 3530 62 2 0 chr5_random 2510471 2510926 -1267557 - L1PA5 LINE L1 -2 6152 5697 22 0 0 0 chr5_random 2511235 2511257 -1267226 + AT_rich Low_complexity Low_complexity 1 22 0 41557 62 5 1 chr5_random 2512286 2518410 -1260073 + L1PA4 LINE L1 3 6152 -3 234 345 23 0 chr5_random 2519123 2519210 -1259273 + L1ME LINE L1 5488 5576 -586 246 116 0 0 chr5_random 2519551 2519594 -1258889 + (CA)n Simple_repeat Simple_repeat 1 43 0 183 254 0 0 chr5_random 2519601 2519664 -1258819 + (CATA)n Simple_repeat Simple_repeat 2 64 0 1411 167 84 11 chr5_random 2519668 2519943 -1258540 + MER47A DNA MER2_type 1 295 -71 320 278 117 33 chr5_random 2520352 2520712 -1257771 + MER20B DNA MER1_type 394 783 0 244 152 87 0 chr5_random 2520712 2520754 -1257729 - MLT1L LTR MaLR -460 155 110 238 367 114 13 chr5_random 2521325 2521483 -1257000 - L3 LINE CR1 -1218 359 186 1019 196 3 2 chr5_random 2521754 2524469 -1254014 - ALR/Alpha Satellite centromeric 0 2716 1 1051 195 5 3 chr5_random 2524481 2537307 -1241176 - ALR/Alpha Satellite centromeric 0 12847 1 1250 139 39 28 chr5_random 2537407 2538432 -1240051 - GSATII Satellite centromeric -8 1035 1 1164 122 0 1 chr5_random 2538541 2539036 -1239447 + (GAATG)n Satellite Satellite 1 673 0 897 140 0 0 chr5_random 2539071 2539249 -1239234 + (GAATG)n Satellite Satellite 3 180 0 1173 106 0 9 chr5_random 2539274 2539614 -1238869 + (GAATG)n Satellite Satellite 4 510 0 1053 130 0 1 chr5_random 2539629 2540140 -1238343 + (GAATG)n Satellite Satellite 1 689 0 723 174 0 0 chr5_random 2540151 2540329 -1238154 + (GAATG)n Satellite Satellite 3 180 0 234 143 0 0 chr5_random 2540341 2540390 -1238093 + (GAATG)n Satellite Satellite 2 50 0 1170 104 2 2 chr5_random 2540411 2540898 -1237585 + (GAATG)n Satellite Satellite 1 487 0 330 164 0 0 chr5_random 2541002 2541069 -1237414 + AluSp/q SINE Alu 237 303 0 2961 243 9 1 chr5_random 2541073 2541810 -1236673 + L1 LINE L1 4477 5219 -927 552 99 6 66 chr5_random 2541811 2541992 -1236491 + (CCCTAA)n Simple_repeat Simple_repeat 1 170 0 272 143 0 48 chr5_random 2542031 2542115 -1236368 + (CCCTAA)n Simple_repeat Simple_repeat 4 83 0 3388 164 8 8 chr5_random 2542255 2542891 -1235592 - TAR1 Satellite telomeric -43 2068 1433 1282 135 65 14 chr5_random 2542881 2543527 -1234956 + GSATII Satellite centromeric 1 678 -56 * 345 62 0 0 chr5_random 2543642 2543690 -1234793 + (GAATG)n Satellite Satellite 2 49 0 1197 90 0 0 chr5_random 2543713 2543890 -1234593 + (GAATG)n Satellite Satellite 2 178 0 1176 106 0 13 chr5_random 2543902 2544266 -1234217 + (GAATG)n Satellite Satellite 2 537 0 1017 122 0 0 chr5_random 2544294 2544705 -1233778 + (GAATG)n Satellite Satellite 1 411 0 1080 120 1 21 chr5_random 2544722 2545280 -1233203 + (GAATG)n Satellite Satellite 2 718 0 1002 132 0 4 chr5_random 2545293 2545637 -1232846 + (GAATG)n Satellite Satellite 2 519 0 811 111 0 53 chr5_random 2545660 2545850 -1232633 + (GAATG)n Satellite Satellite 1 180 0 1137 118 2 22 chr5_random 2545871 2546318 -1232165 + (GAATG)n Satellite Satellite 1 438 0 948 131 0 0 chr5_random 2546345 2546520 -1231963 + (GAATG)n Satellite Satellite 5 179 0 417 116 0 0 chr5_random 2546534 2546603 -1231880 + (GAATG)n Satellite Satellite 2 70 0 6025 214 16 37 chr5_random 2546730 2548327 -1230156 - L1 LINE L1 -1710 4436 2873 575 230 26 26 chr5_random 2548318 2548470 -1230013 - L1M3 LINE L1 -587 5593 5442 * 255 258 0 15 chr5_random 2548457 2548523 -1229960 - L1MA8 LINE L1 -75 6216 6152 * 6212 234 63 24 chr5_random 2549659 2552076 -1226407 - L1M3 LINE L1 -570 5610 3095 559 238 0 0 chr5_random 2552620 2552721 -1225762 - AluJ/FLAM SINE Alu -210 102 2 1519 195 30 18 chr5_random 2552729 2553068 -1225415 - L1M3 LINE L1 -361 5822 5480 886 152 11 73 chr5_random 2553229 2553407 -1225076 + AluSq SINE Alu 1 167 -146 851 133 4 21 chr5_random 2553507 2553747 -1224736 + (CATTC)n Satellite Satellite 1 236 0 200 40 0 0 chr5_random 2553747 2553772 -1224711 + (CATTA)n Simple_repeat Simple_repeat 5 29 0 1326 103 0 0 chr5_random 2553776 2554307 -1224176 + (CATTC)n Satellite Satellite 1 531 0 1106 116 4 22 chr5_random 2554319 2554799 -1223684 + (CATTC)n Satellite Satellite 1 471 0 905 120 0 27 chr5_random 2554841 2555025 -1223458 + (CATTC)n Satellite Satellite 2 180 0 1278 73 0 0 chr5_random 2555055 2555234 -1223249 + (CATTC)n Satellite Satellite 1 179 0 1049 112 4 0 chr5_random 2555260 2555503 -1222980 + (CATTC)n Satellite Satellite 1 244 0 827 103 7 0 chr5_random 2555515 2555661 -1222822 + (CATTC)n Satellite Satellite 3 149 0 809 141 0 27 chr5_random 2555703 2555887 -1222596 + (CATTC)n Satellite Satellite 2 180 0 192 111 0 0 chr5_random 2555898 2555934 -1222549 + (CATTC)n Satellite Satellite 2 37 0 1266 119 0 0 chr5_random 2555949 2556487 -1221996 + (CATTC)n Satellite Satellite 1 538 0 1026 128 2 12 chr5_random 2556498 2556976 -1221507 + (CATTC)n Satellite Satellite 1 473 0 984 124 0 0 chr5_random 2556997 2557175 -1221308 + (CATTC)n Satellite Satellite 2 179 0 279 130 0 0 chr5_random 2557202 2557256 -1221227 + (CATTC)n Satellite Satellite 2 55 0 905 124 0 27 chr5_random 2557281 2557466 -1221017 + (CATTC)n Satellite Satellite 1 180 0 798 170 0 0 chr5_random 2557492 2557730 -1220753 + (CATTC)n Satellite Satellite 1 238 0 1071 142 0 0 chr5_random 2557742 2558071 -1220412 + (CATTC)n Satellite Satellite 1 329 0 1056 106 0 0 chr5_random 2558091 2558261 -1220222 + (CATTC)n Satellite Satellite 1 170 0 1143 125 0 4 chr5_random 2558273 2559046 -1219437 + (CATTC)n Satellite Satellite 1 770 0 790 136 3 16 chr5_random 2559067 2559384 -1219099 + (CATTC)n Satellite Satellite 1 312 0 1080 106 0 0 chr5_random 2559406 2559585 -1218898 + (CATTC)n Satellite Satellite 2 180 0 1149 125 0 12 chr5_random 2559627 2559962 -1218521 + (CATTC)n Satellite Satellite 3 332 0 897 140 0 0 chr5_random 2559986 2560164 -1218319 + (CATTC)n Satellite Satellite 3 180 0 399 113 0 0 chr5_random 2560175 2560246 -1218237 + (CATTC)n Satellite Satellite 2 72 0 915 139 0 0 chr5_random 2560269 2560449 -1218034 + (CATTC)n Satellite Satellite 1 180 0 1290 53 0 0 chr5_random 2560477 2560648 -1217835 + (CATTC)n Satellite Satellite 4 174 0 504 160 0 0 chr5_random 2560660 2560779 -1217704 + (CATTC)n Satellite Satellite 2 120 0 908 128 6 0 chr5_random 2560794 2560973 -1217510 + (CATTC)n Satellite Satellite 1 180 0 1053 121 0 0 chr5_random 2560984 2561382 -1217101 + (CATTC)n Satellite Satellite 1 398 0 1161 96 0 38 chr5_random 2561399 2561863 -1216620 + (CATTC)n Satellite Satellite 1 446 0 1002 141 2 2 chr5_random 2561876 2562307 -1216176 + (CATTC)n Satellite Satellite 1 431 0 893 120 0 27 chr5_random 2562323 2562507 -1215976 + (CATTC)n Satellite Satellite 2 180 0 984 124 0 0 chr5_random 2562528 2562706 -1215777 + (CATTC)n Satellite Satellite 2 179 0 1038 148 0 0 chr5_random 2562733 2563632 -1214851 + (CATTC)n Satellite Satellite 1 899 0 966 113 0 0 chr5_random 2563647 2563807 -1214676 + (CATTC)n Satellite Satellite 1 160 0 1092 142 0 1 chr5_random 2563819 2564586 -1213897 + (CATTC)n Satellite Satellite 1 765 0 1005 123 0 0 chr5_random 2564603 2564782 -1213701 + (CATTC)n Satellite Satellite 2 180 0 972 140 6 3 chr5_random 2564804 2565159 -1213324 + (CATTC)n Satellite Satellite 3 357 0 905 120 0 27 chr5_random 2565201 2565385 -1213098 + (CATTC)n Satellite Satellite 2 180 0 237 83 0 0 chr5_random 2565396 2565432 -1213051 + (CATTC)n Satellite Satellite 2 37 0 1113 106 0 0 chr5_random 2565450 2565630 -1212853 + (CATTC)n Satellite Satellite 1 180 0 840 153 0 0 chr5_random 2565787 2565957 -1212526 + (CATTC)n Satellite Satellite 1 170 0 1164 107 0 0 chr5_random 2565969 2566212 -1212271 + (CATTC)n Satellite Satellite 1 243 0 1122 100 0 0 chr5_random 2566232 2566412 -1212071 + (CATTC)n Satellite Satellite 1 180 0 1104 59 0 0 chr5_random 2566428 2566581 -1211902 + (CATTC)n Satellite Satellite 2 154 0 234 143 0 0 chr5_random 2566593 2566642 -1211841 + (CATTC)n Satellite Satellite 2 50 0 1212 142 1 6 chr5_random 2566668 2567732 -1210751 + (CATTC)n Satellite Satellite 1 1059 0 192 111 0 0 chr5_random 2567743 2567779 -1210704 + (CATTC)n Satellite Satellite 2 37 0 1232 113 1 0 chr5_random 2567794 2568641 -1209842 + (CATTC)n Satellite Satellite 1 848 0 183 42 0 0 chr5_random 2568668 2568692 -1209791 + (CATTC)n Satellite Satellite 3 26 0 753 149 0 0 chr5_random 2568712 2568873 -1209610 + (CATTC)n Satellite Satellite 2 162 0 1014 111 0 26 chr5_random 2568886 2569261 -1209222 + (CATTC)n Satellite Satellite 1 365 0 1047 115 0 0 chr5_random 2569297 2569526 -1208957 + (CATTC)n Satellite Satellite 1 229 0 794 151 3 0 chr5_random 2569547 2569859 -1208624 + (CATTC)n Satellite Satellite 1 313 0 1038 101 0 0 chr5_random 2569881 2570104 -1208379 + (CATTC)n Satellite Satellite 1 223 0 1092 119 0 13 chr5_random 2570131 2570675 -1207808 + (CATTC)n Satellite Satellite 1 537 0 1026 122 0 0 chr5_random 2570695 2570875 -1207608 + (CATTC)n Satellite Satellite 1 180 0 939 132 0 0 chr5_random 2570906 2571080 -1207403 + (CATTC)n Satellite Satellite 2 175 0 972 140 6 3 chr5_random 2571101 2571456 -1207027 + (CATTC)n Satellite Satellite 3 357 0 1106 130 4 13 chr5_random 2571468 2572733 -1205750 + (CATTC)n Satellite Satellite 1 1253 0 881 131 4 0 chr5_random 2572745 2572972 -1205511 + (CATTC)n Satellite Satellite 1 228 0 1320 67 0 0 chr5_random 2572993 2573173 -1205310 + (CATTC)n Satellite Satellite 1 180 0 1094 90 6 0 chr5_random 2573184 2573362 -1205121 + (CATTC)n Satellite Satellite 2 180 0 1019 131 4 10 chr5_random 2573383 2573865 -1204618 + (CATTC)n Satellite Satellite 1 479 0 192 111 0 0 chr5_random 2573876 2573912 -1204571 + (CATTC)n Satellite Satellite 2 37 0 1197 109 0 16 chr5_random 2573927 2574290 -1204193 + (CATTC)n Satellite Satellite 3 358 0 1002 139 2 2 chr5_random 2574303 2574734 -1203749 + (CATTC)n Satellite Satellite 1 431 0 861 150 0 0 chr5_random 2574754 2574934 -1203549 + (CATTC)n Satellite Satellite 1 180 0 984 124 0 0 chr5_random 2574955 2575133 -1203350 + (CATTC)n Satellite Satellite 2 179 0 891 134 0 0 chr5_random 2575160 2575391 -1203092 + (CATTC)n Satellite Satellite 1 231 0 857 146 0 17 chr5_random 2575404 2575698 -1202785 + (CATTC)n Satellite Satellite 1 288 0 1134 126 0 0 chr5_random 2575710 2576061 -1202422 + (CATTC)n Satellite Satellite 1 351 0 1011 109 0 0 chr5_random 2576074 2576239 -1202244 + (CATTC)n Satellite Satellite 1 165 0 1143 127 0 2 chr5_random 2576251 2576779 -1201704 + (CATTC)n Satellite Satellite 1 526 0 918 140 0 0 chr5_random 2576790 2576969 -1201514 + (CATTC)n Satellite Satellite 2 180 0 1080 106 0 0 chr5_random 2576980 2577194 -1201289 + (CATTC)n Satellite Satellite 1 214 0 1172 105 5 2 chr5_random 2577205 2577602 -1200881 + (CATTC)n Satellite Satellite 1 398 0 1176 118 2 2 chr5_random 2577614 2578206 -1200277 + (CATTC)n Satellite Satellite 1 592 0 1179 84 0 0 chr5_random 2578237 2578415 -1200068 + (CATTC)n Satellite Satellite 2 179 0 318 26 0 0 chr5_random 2578416 2578455 -1200028 + (CATTA)n Simple_repeat Simple_repeat 1 39 0 1020 98 10 3 chr5_random 2578467 2578763 -1199720 + (CATTC)n Satellite Satellite 1 298 0 1176 126 1 10 chr5_random 2578786 2579443 -1199040 + (CATTC)n Satellite Satellite 1 650 0 1059 130 2 7 chr5_random 2579456 2580598 -1197885 + (CATTC)n Satellite Satellite 1 1135 0 914 158 6 14 chr5_random 2580624 2580675 -1197808 + (CATTC)n Satellite Satellite 1 51 -263 462 91 0 0 chr5_random 2580675 2580752 -1197731 + (CATTA)n Simple_repeat Simple_repeat 3 79 0 914 158 6 14 chr5_random 2580752 2580764 -1197719 + (CATTC)n Satellite Satellite 51 314 0 914 130 6 0 chr5_random 2580764 2580941 -1197542 + (CATTC)n Satellite Satellite 2 179 0 939 134 0 0 chr5_random 2580997 2581176 -1197307 + (CATTC)n Satellite Satellite 1 179 0 960 133 0 0 chr5_random 2581262 2581442 -1197041 + (CATTC)n Satellite Satellite 1 180 0 1020 79 0 0 chr5_random 2581455 2581607 -1196876 + (CATTC)n Satellite Satellite 4 155 0 4092 183 11 23 chr5_random 2581607 2582507 -1195976 - L1 LINE L1 -1482 4664 3776 1628 193 21 50 chr5_random 2582508 2582699 -1195784 - L1 LINE L1 -2506 3640 3445 2011 141 14 0 chr5_random 2582699 2582989 -1195494 - AluSx SINE Alu -18 294 1 1628 193 21 50 chr5_random 2582989 2583414 -1195069 - L1 LINE L1 -2701 3445 2968 2287 87 0 20 chr5_random 2583415 2583713 -1194770 - AluY SINE Alu -19 292 1 254 226 60 60 chr5_random 2583738 2583822 -1194661 + LTR45B LTR ERV1 406 489 0 1400 134 62 10 chr5_random 2583935 2584215 -1194268 + GSATII Satellite centromeric 1 265 -1913 450 0 0 0 chr5_random 2584215 2584265 -1194218 + (TA)n Simple_repeat Simple_repeat 2 51 0 1400 134 62 10 chr5_random 2584265 2585946 -1192537 + GSATII Satellite centromeric 265 2114 -64 344 167 60 107 chr5_random 2585959 2586109 -1192374 + L1MB8 LINE L1 6000 6142 -36 1085 124 3 0 chr5_random 2586799 2588209 -1190274 - ACRO1 Satellite acromeric 0 1413 1 616 208 0 0 chr5_random 2588542 2588798 -1189685 - ACRO1 Satellite acromeric 0 256 1 1866 82 74 0 chr5_random 2589189 2589459 -1189024 + L1PA10 LINE L1 5860 6149 -19 186 103 0 0 chr5_random 2589459 2589488 -1188995 + (CGAAA)n Simple_repeat Simple_repeat 2 30 0 1597 223 161 7 chr5_random 2589665 2590126 -1188357 - MER21B LTR ERV1 -133 730 199 219 224 118 0 chr5_random 2590378 2590454 -1188029 - MER5A DNA MER1_type -6 183 99 243 0 0 0 chr5_random 2590871 2590898 -1187585 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 1035 148 0 7 chr5_random 2591075 2591224 -1187259 + AluSg/x SINE Alu 144 291 -21 6435 125 17 5 chr5_random 2591224 2592185 -1186298 + MER57B-int LTR ERV1 5217 6188 -1349 2417 154 33 5 chr5_random 2592177 2592573 -1185910 + MER57B-int LTR ERV1 6661 7067 -470 * 692 154 9 0 chr5_random 2593418 2593528 -1184955 + MER57B-int LTR ERV1 7032 7142 -395 2249 110 0 0 chr5_random 2593529 2593821 -1184662 - AluY SINE Alu -19 292 1 768 108 23 31 chr5_random 2593836 2593966 -1184517 + LTR54B LTR ERV1 3 131 -367 1386 135 131 0 chr5_random 2593966 2594195 -1184288 + MER57B-int LTR ERV1 7279 7537 0 2246 153 90 2 chr5_random 2594195 2594594 -1183889 + MER57B LTR ERV1 1 434 0 228 150 75 0 chr5_random 2594635 2594675 -1183808 + LTR6A LTR ERV1 1 43 -521 3859 114 7 11 chr5_random 2594675 2595238 -1183245 + LTR6A LTR ERV1 4 564 0 296 272 31 53 chr5_random 2596833 2597064 -1181419 + MLT1H LTR MaLR 325 549 0 2336 97 0 0 chr5_random 2598622 2598943 -1179540 - AluSg SINE Alu 0 310 1 1548 233 52 3 chr5_random 2599456 2599799 -1178684 + MSTA LTR MaLR 9 368 -60 1377 176 0 0 chr5_random 2599828 2600066 -1178417 + MSTA-int LTR MaLR 13 250 -1401 * 1405 163 8 12 chr5_random 2600063 2600315 -1178168 + MSTA-int LTR MaLR 1401 1651 0 980 261 7 39 chr5_random 2600315 2600598 -1177885 + MSTA LTR MaLR 1 274 -154 248 229 24 35 chr5_random 2600604 2600705 -1177778 - HSAT5 Satellite Satellite -1 99 1 359 205 0 12 chr5_random 2600934 2601033 -1177450 - HSAT5 Satellite Satellite -3 97 1 626 112 0 32 chr5_random 2601194 2601380 -1177103 - HSAT5 Satellite Satellite 0 180 1 264 163 10 163 chr5_random 2601398 2601496 -1176987 - HSAT5 Satellite Satellite -3 83 1 767 108 3 3 chr5_random 2601842 2606635 -1171848 + CER Satellite Satellite 1 4791 -6 745 206 15 0 chr5_random 2606626 2606762 -1171721 + MLT1A1 LTR MaLR 226 363 -2 * 3764 180 106 82 chr5_random 2606764 2608211 -1170272 + L1MCa LINE L1 723 2205 -4221 295 146 52 52 chr5_random 2608210 2608306 -1170177 + L1MCa LINE L1 2104 2199 -4227 * 1603 166 51 19 chr5_random 2608310 2608683 -1169800 + L1MCa LINE L1 2104 2488 -3938 10174 195 47 68 chr5_random 2608683 2610349 -1168134 + Tigger1 DNA MER2_type 1 1700 -718 1830 129 31 14 chr5_random 2610349 2610636 -1167847 + AluSg SINE Alu 1 292 -18 10174 195 47 68 chr5_random 2610636 2611218 -1167265 + Tigger1 DNA MER2_type 1700 2195 -223 1260 181 124 11 chr5_random 2611218 2611483 -1167000 + AluJb SINE Alu 1 295 -17 10174 195 47 68 chr5_random 2611483 2611703 -1166780 + Tigger1 DNA MER2_type 2195 2418 0 254 164 0 18 chr5_random 2611705 2611760 -1166723 + L1MB1 LINE L1 6100 6153 -15 1825 86 0 0 chr5_random 2611766 2611988 -1166495 - AluY SINE Alu -22 289 68 2054 118 10 38 chr5_random 2612182 2612496 -1165987 - AluSx SINE Alu -7 305 1 380 242 31 8 chr5_random 2612627 2612755 -1165728 + L1MCa LINE L1 3200 3330 -3096 233 227 30 0 chr5_random 2612751 2612817 -1165666 + L1MCa LINE L1 3263 3330 -3096 * 259 212 30 0 chr5_random 2612813 2612879 -1165604 + L1MCa LINE L1 3263 3330 -3096 3631 239 96 55 chr5_random 2612885 2613971 -1164512 + L1MCa LINE L1 3274 4313 -2113 1848 164 0 49 chr5_random 2613971 2614295 -1164188 + AluSx SINE Alu 1 308 -4 3631 239 96 55 chr5_random 2614295 2614356 -1164127 + L1MCa LINE L1 4313 4370 -2056 1971 143 0 7 chr5_random 2614356 2614650 -1163833 + AluSx SINE Alu 1 292 -20 3631 239 96 55 chr5_random 2614650 2615455 -1163028 + L1MCa LINE L1 4370 5507 -919 1156 168 110 0 chr5_random 2615455 2615664 -1162819 - MER46A DNA MER2_type -3 233 2 3631 239 96 55 chr5_random 2615664 2615726 -1162757 + L1MCa LINE L1 5507 5565 -861 2157 187 173 67 chr5_random 2616755 2617559 -1160924 + L1MB2 LINE L1 5281 6169 -2 22 0 0 0 chr5_random 2617559 2617581 -1160902 + AT_rich Low_complexity Low_complexity 1 22 0 1528 199 7 17 chr5_random 2617585 2617876 -1160607 - AluJb SINE Alu -24 288 1 1300 251 118 54 chr5_random 2617877 2617987 -1160496 + L1MEc LINE L1 2084 2186 -4029 1751 199 7 0 chr5_random 2617987 2618293 -1160190 + AluJb SINE Alu 1 308 -4 1300 251 118 54 chr5_random 2618293 2619073 -1159410 + L1MEc LINE L1 2186 3003 -3212 398 260 167 69 chr5_random 2619099 2619603 -1158880 + MLT1H1 LTR MaLR 3 555 0 182 114 0 29 chr5_random 2620040 2620075 -1158408 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 684 279 68 26 chr5_random 2620673 2620938 -1157545 + MLT1H1 LTR MaLR 1 276 -279 325 265 66 22 chr5_random 2620970 2621106 -1157377 + MLT1H1 LTR MaLR 411 552 -38 2063 129 7 7 chr5_random 2621863 2622172 -1156311 + AluSp SINE Alu 1 309 -4 2378 122 15 105 chr5_random 2622568 2623045 -1155438 + MER57B LTR ERV1 1 434 0 1609 217 145 14 chr5_random 2623185 2623691 -1154792 + MER52A LTR ERV1 1 648 -1107 4037 186 36 22 chr5_random 2623706 2624446 -1154037 + MER52A LTR ERV1 1005 1755 0 4044 116 24 49 chr5_random 2624446 2625104 -1153379 + MER52A-int LTR ERV1 88 729 -6808 1300 205 70 0 chr5_random 2625102 2625361 -1153122 + MER52A-int LTR ERV1 1350 1626 -5911 * 2029 134 3 3 chr5_random 2625385 2625683 -1152800 + AluSp SINE Alu 1 298 -15 345 110 330 11 chr5_random 2625685 2625776 -1152707 + MER57-int LTR ERV1 4349 4468 -3069 30475 50 55 3 chr5_random 2625776 2631456 -1147027 + L1PA3 LINE L1 1 6071 -84 2062 127 3 34 chr5_random 2682683 2683006 -1095477 - AluSq SINE Alu 0 313 1 782 126 7 0 chr5_random 2683130 2683265 -1095218 + (GA)n Simple_repeat Simple_repeat 1 136 0 574 224 100 12 chr5_random 2683276 2683446 -1095037 - MLT1B LTR MaLR -205 185 1 951 220 63 0 chr5_random 2683572 2683795 -1094688 - L1MCa LINE L1 -4857 1569 1333 4474 121 63 4 chr5_random 2685719 2686419 -1092064 - L1MA1 LINE L1 -5 6297 5557 2074 95 6 32 chr5_random 2686737 2687052 -1091431 + AluY SINE Alu 1 307 -4 302 291 117 74 chr5_random 2688141 2688467 -1090016 - L1M2 LINE L1 -5858 991 652 333 0 0 0 chr5_random 2689207 2689244 -1089239 + (TG)n Simple_repeat Simple_repeat 1 37 0 1652 145 12 0 chr5_random 2689373 2689622 -1088861 + AluSx SINE Alu 45 296 -16 1735 142 26 50 chr5_random 2689678 2689981 -1088502 - AluSp SINE Alu -17 296 1 1199 273 58 51 chr5_random 2690298 2690870 -1087613 + L1ME2 LINE L1 5455 6030 -134 221 241 0 35 chr5_random 2692781 2692839 -1085644 - L2 LINE L2 -1 3271 3216 405 246 78 42 chr5_random 2693291 2693433 -1085050 - MER104 DNA Tc2 0 180 34 1708 179 0 7 chr5_random 2693533 2693829 -1084654 + AluJo SINE Alu 1 294 -18 465 254 176 44 chr5_random 2693833 2694038 -1084445 - MIR SINE MIR -11 251 20 22 35 0 0 chr5_random 2694902 2694931 -1083552 + AT_rich Low_complexity Low_complexity 1 29 0 289 252 122 53 chr5_random 2695801 2695932 -1082551 - MER5A DNA MER1_type 0 189 50 345 174 270 113 chr5_random 2695937 2696052 -1082431 + FLAM_A SINE Alu 1 133 0 28 29 0 0 chr5_random 2696679 2696714 -1081769 + AT_rich Low_complexity Low_complexity 1 35 0 556 274 97 34 chr5_random 2696935 2697172 -1081311 + MER102a DNA MER1_type 78 329 -1 21 0 0 0 chr5_random 2697551 2697572 -1080911 + AT_rich Low_complexity Low_complexity 1 21 0 192 257 129 14 chr5_random 2698275 2698345 -1080138 - L2 LINE L2 -57 3215 3138 2279 101 0 0 chr5_random 2699042 2699330 -1079153 - AluSc SINE Alu -21 288 1 207 232 0 0 chr5_random 2699364 2699420 -1079063 + (TTA)n Simple_repeat Simple_repeat 2 57 0 650 186 127 0 chr5_random 2700262 2700380 -1078103 - FLAM_C SINE Alu 0 133 1 546 229 9 0 chr5_random 2701329 2701434 -1077049 + U6 snRNA snRNA 1 106 -1 213 281 97 26 chr5_random 2702096 2702210 -1076273 - MIR SINE MIR -47 215 94 21 0 0 0 chr5_random 2702749 2702770 -1075713 + AT_rich Low_complexity Low_complexity 1 21 0 1834 213 53 12 chr5_random 2703039 2703456 -1075027 - Tigger2a DNA MER2_type 0 434 1 260 273 0 0 chr5_random 2703710 2703765 -1074718 + (CA)n Simple_repeat Simple_repeat 2 56 0 820 193 0 0 chr5_random 2704071 2704206 -1074277 - FAM SINE Alu -29 156 22 1262 194 3 82 chr5_random 2704241 2704570 -1073913 - AluJb SINE Alu -9 303 1 2745 187 50 9 chr5_random 2704936 2705476 -1073007 - MER68 LTR ERV1 0 562 1 28 29 0 0 chr5_random 2705509 2705544 -1072939 + AT_rich Low_complexity Low_complexity 1 35 0 26 0 0 0 chr5_random 2705884 2705910 -1072573 + AT_rich Low_complexity Low_complexity 1 26 0 1946 162 7 3 chr5_random 2706031 2706339 -1072144 - AluSq SINE Alu -4 309 1 23 0 0 0 chr5_random 2706342 2706365 -1072118 + AT_rich Low_complexity Low_complexity 1 23 0 2013 144 0 0 chr5_random 2706405 2706696 -1071787 - AluSx SINE Alu -17 295 5 2473 154 9 42 chr5_random 2706708 2707142 -1071341 - L1MC1 LINE L1 0 6333 5914 850 142 45 0 chr5_random 2708168 2708302 -1070181 - Tigger7 DNA MER2_type 0 2491 2352 711 136 52 39 chr5_random 2708308 2708462 -1070021 + MER21A LTR ERV1 747 902 -29 219 36 0 0 chr5_random 2708852 2708880 -1069603 + (CAA)n Simple_repeat Simple_repeat 2 29 0 680 219 0 24 chr5_random 2708911 2709034 -1069449 - FLAM_A SINE Alu -17 125 6 189 360 95 27 chr5_random 2709190 2709412 -1069071 - MIR SINE MIR -6 256 20 224 312 128 9 chr5_random 2710019 2710128 -1068355 - MIR SINE MIR -121 141 20 180 0 0 0 chr5_random 2712593 2712613 -1065870 + (CTG)n Simple_repeat Simple_repeat 3 22 0 23 0 0 0 chr5_random 2712755 2712778 -1065705 + AT_rich Low_complexity Low_complexity 1 23 0 201 132 0 0 chr5_random 2714034 2714072 -1064411 + (TC)n Simple_repeat Simple_repeat 1 38 0 9702 57 8 9 chr5_random 2715560 2717497 -1060986 + L1PA5 LINE L1 4207 6143 -11 1209 45 7 19 chr5_random 2717607 2717762 -1060721 + L1PA5 LINE L1 6000 6152 -2 303 248 71 35 chr5_random 2718720 2718833 -1059650 - L1ME4a LINE L1 -1 6120 6004 6645 96 13 23 chr5_random 2720094 2720898 -1057585 - L1PA14 LINE L1 0 6161 5368 2305 105 3 0 chr5_random 2720898 2721204 -1057279 - AluY SINE Alu -3 308 2 6645 96 13 23 chr5_random 2721204 2721697 -1056786 - L1PA14 LINE L1 -793 5368 4872 217 272 126 96 chr5_random 2722773 2723012 -1055471 - MIR SINE MIR -9 253 8 28700 77 10 66 chr5_random 2723268 2726406 -1052077 - L1P LINE L1 -2054 4092 1262 4664 245 34 16 chr5_random 2726406 2727345 -1051138 - LTR5 LTR ERVK 0 969 14 28700 77 10 66 chr5_random 2727345 2728531 -1049952 - L1P LINE L1 -4884 1262 11 248 298 206 32 chr5_random 2728686 2728938 -1049545 - L2 LINE L2 -121 3192 2897 455 310 53 31 chr5_random 2728950 2729176 -1049307 + MARNA DNA Mariner 200 430 -156 2230 96 4 0 chr5_random 2730008 2730319 -1048164 - AluSp SINE Alu 0 314 3 386 253 188 26 chr5_random 2730493 2730647 -1047836 - MIR SINE MIR -50 212 34 1663 131 14 40 chr5_random 2731356 2731631 -1046852 - AluSp SINE Alu -11 302 35 2379 105 0 3 chr5_random 2732044 2732348 -1046135 + AluSq SINE Alu 1 303 -10 645 287 85 7 chr5_random 2732784 2733077 -1045406 + MER21B LTR ERV1 423 738 -125 2195 117 0 0 chr5_random 2733135 2733523 -1044960 + AluSg SINE Alu 1 388 0 43 112 0 0 chr5_random 2734773 2734970 -1043513 + AT_rich Low_complexity Low_complexity 1 197 0 2566 68 0 3 chr5_random 2736060 2736369 -1042114 + AluY SINE Alu 1 308 -3 875 181 30 0 chr5_random 2736454 2736620 -1041863 + MER67C LTR ERV1 281 451 -259 3277 137 51 5 chr5_random 2736632 2737205 -1041278 + MER51C LTR ERV1 2 640 0 860 211 41 16 chr5_random 2741447 2741693 -1036790 - L1MC/D LINE L1 -756 5603 5352 6137 47 3 12 chr5_random 2741990 2742729 -1035754 - SVA Other Other 0 1386 655 708 205 18 30 chr5_random 2742835 2743013 -1035470 + MER61D LTR ERV1 338 484 -17 545 211 82 107 chr5_random 2743219 2743537 -1034946 + MER33 DNA MER1_type 1 310 -14 318 216 0 0 chr5_random 2743657 2743731 -1034752 + (TG)n Simple_repeat Simple_repeat 2 75 0 303 298 8 16 chr5_random 2744548 2744672 -1033811 - MER93a LTR ERV1 -36 366 244 363 283 97 31 chr5_random 2744704 2745031 -1033452 + MER21B LTR ERV1 416 841 -90 2319 64 3 24 chr5_random 2745583 2745880 -1032603 - AluY SINE Alu -20 291 1 1715 219 141 24 chr5_random 2746037 2746668 -1031815 + MER67C LTR ERV1 1 705 -5 2405 147 41 0 chr5_random 2747137 2747553 -1030930 + LTR56 LTR ERV1 1 433 -12 196 344 0 0 chr5_random 2748262 2748323 -1030160 - L2 LINE L2 -62 3251 3191 204 174 92 184 chr5_random 2749210 2749319 -1029164 + MIR SINE MIR 155 253 -9 712 73 0 0 chr5_random 2751307 2751403 -1027080 - L1PA2 LINE L1 -3 6152 6057 1137 128 0 64 chr5_random 2751606 2751809 -1026674 + MER30B DNA MER1_type 1 190 0 1809 99 119 58 chr5_random 2751836 2752130 -1026353 - AluSx SINE Alu 0 312 1 456 225 110 31 chr5_random 2752360 2752551 -1025932 - MER6B DNA MER2_type -1 209 4 1758 198 71 50 chr5_random 2752589 2753292 -1025191 - L1MA9 LINE L1 -35 6284 5521 2630 238 50 25 chr5_random 2753298 2754220 -1024263 - L1MA9 LINE L1 -780 5366 4422 1440 130 0 10 chr5_random 2754225 2754432 -1024051 - AluSg/x SINE Alu -3 309 105 341 309 0 18 chr5_random 2754440 2754550 -1023933 + L1 LINE L1 699 806 -5149 465 221 63 92 chr5_random 2754688 2754907 -1023576 + L1 LINE L1 3993 4200 -1834 623 186 0 64 chr5_random 2754907 2755047 -1023436 - FLAM_C SINE Alu -2 131 1 465 221 63 92 chr5_random 2755047 2755162 -1023321 + L1 LINE L1 4200 4317 -1717 591 181 0 0 chr5_random 2755167 2755261 -1023222 + AluS SINE Alu 3 96 -217 298 226 0 0 chr5_random 2755311 2755373 -1023110 + MER6B DNA MER2_type 147 208 -2 619 328 18 77 chr5_random 2755515 2755972 -1022511 - L1M3a LINE L1 -5401 554 125 * 1939 255 95 17 chr5_random 2755970 2756240 -1022243 - L1MB1 LINE L1 -177 5991 5743 2267 183 26 7 chr5_random 2756240 2756660 -1021823 + MSTA LTR MaLR 1 428 0 1939 255 95 17 chr5_random 2756660 2757742 -1020741 - L1MB1 LINE L1 -425 5743 4535 333 262 56 9 chr5_random 2757763 2757870 -1020613 - L1MB1 LINE L1 -3263 2883 2772 580 174 50 0 chr5_random 2757880 2758001 -1020482 + L1PA13 LINE L1 6035 6161 -2 865 273 38 15 chr5_random 2758036 2758377 -1020106 - L1MB2 LINE L1 -148 5847 5499 225 305 85 20 chr5_random 2758379 2758579 -1019904 - L1MB2 LINE L1 -1295 4675 4463 2108 66 78 0 chr5_random 2758582 2758853 -1019630 - AluY SINE Alu -14 297 6 273 350 45 29 chr5_random 2759020 2759263 -1019220 - L1MB2 LINE L1 -5610 281 35 500 203 24 123 chr5_random 2759284 2759312 -1019171 - L1MB8 LINE L1 -113 6065 6036 791 204 24 10 chr5_random 2759312 2759518 -1018965 - L1MA2 LINE L1 0 6304 6096 500 203 24 123 chr5_random 2759518 2759740 -1018743 - L1MB8 LINE L1 -142 6036 5840 633 76 0 0 chr5_random 2759797 2759889 -1018594 + (TTCC)n Simple_repeat Simple_repeat 4 95 0 288 218 0 0 chr5_random 2760191 2760246 -1018237 - Tigger5 DNA MER2_type -2268 55 1 1655 129 70 3 chr5_random 2760635 2760922 -1017561 + L1PA10 LINE L1 5863 6168 0 1457 228 161 7 chr5_random 2761108 2761569 -1016914 - MER21B LTR ERV1 -133 730 199 213 261 31 15 chr5_random 2761821 2761886 -1016597 - MER5A DNA MER1_type -6 183 118 315 0 0 0 chr5_random 2762314 2762349 -1016134 + (TCTG)n Simple_repeat Simple_repeat 2 36 0 449 97 14 0 chr5_random 2762391 2762463 -1016020 + (CA)n Simple_repeat Simple_repeat 1 73 0 545 210 0 0 chr5_random 2762884 2763140 -1015343 + ACRO1 Satellite acromeric 1 256 -38 1040 137 2 1 chr5_random 2763472 2764737 -1013746 + ACRO1 Satellite acromeric 1 1266 -55 672 207 36 116 chr5_random 2765427 2765756 -1012727 - L1MB8 LINE L1 -36 6142 5840 345 117 0 0 chr5_random 2765813 2765873 -1012610 + (TTCC)n Simple_repeat Simple_repeat 4 63 0 268 236 0 0 chr5_random 2766175 2766230 -1012253 - Tigger5 DNA MER2_type -2268 55 1 1688 125 70 3 chr5_random 2766619 2766906 -1011577 + L1PA10 LINE L1 5863 6168 0 1427 223 163 9 chr5_random 2767092 2767553 -1010930 - MER21B LTR ERV1 -133 730 199 237 265 29 15 chr5_random 2767805 2767873 -1010610 - MER5A DNA MER1_type -6 183 115 387 0 0 0 chr5_random 2768298 2768341 -1010142 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 449 97 14 0 chr5_random 2768383 2768455 -1010028 + (CA)n Simple_repeat Simple_repeat 1 73 0 605 194 0 0 chr5_random 2768876 2769085 -1009398 + ACRO1 Satellite acromeric 1 209 -11 1112 123 3 1 chr5_random 2769519 2771075 -1007408 + ACRO1 Satellite acromeric 1 1559 -55 684 204 36 116 chr5_random 2771765 2772094 -1006389 - L1MB8 LINE L1 -36 6142 5840 489 92 0 0 chr5_random 2772151 2772227 -1006256 + (TTCC)n Simple_repeat Simple_repeat 4 79 0 288 218 0 0 chr5_random 2772529 2772584 -1005899 - Tigger5 DNA MER2_type -2268 55 1 1688 125 70 3 chr5_random 2772973 2773260 -1005223 + L1PA10 LINE L1 5863 6168 0 1419 230 161 7 chr5_random 2773446 2773907 -1004576 - MER21B LTR ERV1 -133 730 199 237 246 31 15 chr5_random 2774159 2774224 -1004259 - MER5A DNA MER1_type -6 183 118 351 0 0 0 chr5_random 2774652 2774691 -1003792 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 437 76 15 0 chr5_random 2774733 2774799 -1003684 + (CA)n Simple_repeat Simple_repeat 1 67 0 624 196 0 0 chr5_random 2775220 2775476 -1003007 + ACRO1 Satellite acromeric 1 256 -38 1040 115 4 0 chr5_random 2775808 2777939 -1000544 + ACRO1 Satellite acromeric 1 2139 -56 330 171 47 155 chr5_random 2778630 2778823 -999660 - L1MB8 LINE L1 -36 6142 5971 228 250 31 16 chr5_random 2778950 2779014 -999469 - MER5A DNA MER1_type -7 182 118 279 0 0 0 chr5_random 2779442 2779473 -999010 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 416 91 15 0 chr5_random 2779515 2779581 -998902 + (CA)n Simple_repeat Simple_repeat 1 67 0 647 188 2 2 chr5_random 2780002 2780258 -998225 + ACRO1 Satellite acromeric 1 256 -38 311 83 83 0 chr5_random 2780590 2780650 -997833 + ACRO1 Satellite acromeric 75 139 -8 759 190 45 129 chr5_random 2780803 2781135 -997348 - L1MB8 LINE L1 -36 6142 5839 681 66 0 0 chr5_random 2781189 2781280 -997203 + (TTCC)n Simple_repeat Simple_repeat 1 91 0 1828 102 69 0 chr5_random 2782000 2782274 -996209 + L1PA10 LINE L1 5860 6152 -16 1580 224 157 16 chr5_random 2782488 2782939 -995544 - MER21B LTR ERV1 -150 713 199 234 224 132 13 chr5_random 2783191 2783267 -995216 - MER5A DNA MER1_type -6 183 99 1215 188 108 10 chr5_random 2783694 2783982 -994501 + SATR1 Satellite Satellite 143 458 -12 221 193 18 0 chr5_random 2784148 2784205 -994278 + (TA)n Simple_repeat Simple_repeat 1 58 0 2301 171 127 30 chr5_random 2786898 2786954 -991529 - SATR1 Satellite Satellite -393 2162 2113 2318 68 0 0 chr5_random 2786954 2787246 -991237 - AluY SINE Alu -19 292 1 2301 171 127 30 chr5_random 2787246 2788869 -989614 - SATR1 Satellite Satellite -442 2113 1 1469 179 32 56 chr5_random 2788882 2789278 -989205 + MLT2B3 LTR ERVL 183 554 0 181 274 39 0 chr5_random 2789819 2789870 -988613 + L2 LINE L2 3013 3065 -248 29 47 0 0 chr5_random 2790162 2790205 -988278 + AT_rich Low_complexity Low_complexity 1 43 0 291 130 43 43 chr5_random 2790260 2790329 -988154 - AluJb SINE Alu -193 109 41 21 0 0 0 chr5_random 2790641 2790662 -987821 + AT_rich Low_complexity Low_complexity 1 21 0 1071 168 102 40 chr5_random 2790817 2791120 -987363 + MER33 DNA MER1_type 1 322 -2 643 269 91 57 chr5_random 2793381 2793644 -984839 - L1MC4 LINE L1 0 8042 7790 2013 115 0 23 chr5_random 2793644 2793948 -984535 + AluY SINE Alu 1 297 -14 643 269 91 57 chr5_random 2793948 2794004 -984479 - L1MC4 LINE L1 -252 7790 7737 1454 129 55 16 chr5_random 2794004 2794259 -984224 - AluSx SINE Alu -15 297 33 643 269 91 57 chr5_random 2794259 2794343 -984140 - L1MC4 LINE L1 -305 7737 7624 185 296 122 41 chr5_random 2794553 2794651 -983832 - L2 LINE L2 -20 3293 3188 21 57 0 0 chr5_random 2794813 2794848 -983635 + AT_rich Low_complexity Low_complexity 1 35 0 361 155 0 0 chr5_random 2796913 2796924 -981559 - MER46A DNA MER2_type -82 154 144 2387 181 123 0 chr5_random 2796924 2797395 -981088 + Tigger4(Zombi) DNA MER2_type 2 530 -2201 * 5107 99 51 26 chr5_random 2797394 2798195 -980288 + Tigger4(Zombi) DNA MER2_type 1911 2731 0 3290 193 44 87 chr5_random 2799127 2799292 -979191 - L1MB7 LINE L1 0 6184 6014 878 158 0 61 chr5_random 2799292 2799500 -978983 - FRAM SINE Alu 0 166 1 3290 193 44 87 chr5_random 2799500 2800224 -978259 - L1MB7 LINE L1 -170 6014 5337 2620 173 60 9 chr5_random 2800224 2800779 -977704 - L1MC2 LINE L1 -1 6343 5761 3290 193 44 87 chr5_random 2800779 2800859 -977624 - L1MB7 LINE L1 -847 5337 5255 3636 203 31 55 chr5_random 2800869 2801853 -976630 + L1MB7 LINE L1 4282 5242 -904 2304 64 0 7 chr5_random 2801891 2802188 -976295 - L1PA5 LINE L1 -1 6153 5859 405 0 0 0 chr5_random 2802188 2802233 -976250 + (TA)n Simple_repeat Simple_repeat 2 46 0 806 206 6 0 chr5_random 2803308 2803468 -975015 + FRAM SINE Alu 1 153 -23 517 195 211 0 chr5_random 2803543 2803666 -974817 - MLT1D LTR MaLR -46 459 311 190 330 144 0 chr5_random 2805592 2805689 -972794 + MIR SINE MIR 117 227 -35 15627 44 1 0 chr5_random 2811182 2813876 -964607 + L1PA3 LINE L1 3475 6176 0 10214 125 32 33 chr5_random 2813876 2814326 -964157 + MER57-int LTR ERV1 4465 4914 -2623 2102 103 7 0 chr5_random 2814326 2814616 -963867 - AluY SINE Alu -15 296 5 10214 125 32 33 chr5_random 2814616 2814929 -963554 + MER57-int LTR ERV1 4914 5226 -2311 2065 128 7 0 chr5_random 2814929 2815225 -963258 + AluSx SINE Alu 1 298 -14 10214 125 32 33 chr5_random 2815225 2816186 -962297 + MER57-int LTR ERV1 5226 6188 -1349 2319 156 59 7 chr5_random 2816178 2816583 -961900 + MER57-int LTR ERV1 6661 7086 -451 * 848 198 3 3 chr5_random 2817844 2818197 -960286 + ACRO1 Satellite acromeric 1 353 -55 311 193 60 107 chr5_random 2818887 2819037 -959446 - L1MB8 LINE L1 -36 6142 6000 1503 136 51 20 chr5_random 2819050 2822297 -956186 - GSATII Satellite centromeric -8 3347 1 * 3163 157 14 9 chr5_random 2822287 2822862 -955621 + TAR1 Satellite telomeric 1491 2068 -43 454 103 4 77 chr5_random 2823002 2823241 -955242 + (TTAGGG)n Simple_repeat Simple_repeat 1 221 0 7603 210 18 97 chr5_random 2823294 2824028 -954455 - L1 LINE L1 -927 5219 4429 1032 163 0 0 chr5_random 2824028 2824206 -954277 - AluSp SINE Alu 0 313 136 7603 210 18 97 chr5_random 2824206 2825555 -952928 - L1 LINE L1 -1717 4429 3180 204 40 0 0 chr5_random 2825555 2825580 -952903 + (TTG)n Simple_repeat Simple_repeat 3 27 0 7603 210 18 97 chr5_random 2825580 2825866 -952617 - L1 LINE L1 -2966 3180 2873 591 241 25 25 chr5_random 2825851 2826009 -952474 - L1M3 LINE L1 -581 5599 5442 * 251 258 0 15 chr5_random 2825996 2826062 -952421 - L1MA8 LINE L1 -75 6216 6152 * 5146 263 65 28 chr5_random 2827198 2829619 -948864 - L1M3 LINE L1 -570 5610 3095 511 226 0 0 chr5_random 2830163 2830265 -948218 - AluJ/FLAM SINE Alu -210 102 1 1453 205 17 29 chr5_random 2830272 2830619 -947864 - L1M3 LINE L1 -361 5822 5480 1653 171 7 18 chr5_random 2830780 2831066 -947417 + AluSx SINE Alu 1 283 -29 1572 125 0 5 chr5_random 2831166 2831390 -947093 - AluSx SINE Alu -86 226 4 814 249 87 63 chr5_random 2831938 2832226 -946257 - MER21B LTR ERV1 -57 806 507 1703 182 3 10 chr5_random 2832226 2832517 -945966 - AluJo SINE Alu -15 297 9 814 249 87 63 chr5_random 2832517 2832561 -945922 - MER21B LTR ERV1 -356 507 466 429 182 0 45 chr5_random 2832564 2832652 -945831 - AluJ/FLAM SINE Alu -218 94 11 1873 165 0 7 chr5_random 2832667 2832970 -945513 - AluSx SINE Alu -6 306 6 361 181 9 112 chr5_random 2832981 2833053 -945430 - L1MB7 LINE L1 0 6184 6127 1439 226 3 3 chr5_random 2833053 2833359 -945124 + AluJo SINE Alu 1 306 -6 361 181 9 112 chr5_random 2833359 2833402 -945081 - L1MB7 LINE L1 -57 6127 6081 3089 224 123 11 chr5_random 2833459 2833793 -944690 + L1MC4a LINE L1 6604 6899 -909 1868 145 3 3 chr5_random 2833793 2834083 -944400 + AluSx SINE Alu 1 290 -22 3089 224 123 11 chr5_random 2834083 2834661 -943822 + L1MC4a LINE L1 6899 7618 -190 1411 274 74 35 chr5_random 2834635 2835353 -943130 + L1M4 LINE L1 2810 3498 -2648 * 1468 226 58 0 chr5_random 2835353 2835698 -942785 + MER47A DNA MER2_type 1 365 -1 1411 274 74 35 chr5_random 2835698 2835744 -942739 + L1M4 LINE L1 3498 3541 -2605 2097 129 3 3 chr5_random 2835744 2836054 -942429 + AluSp SINE Alu 1 310 -3 1411 274 74 35 chr5_random 2836054 2836301 -942182 + L1M4 LINE L1 3541 3862 -2284 353 189 40 0 chr5_random 2836309 2836383 -942100 + L1ME1 LINE L1 6086 6162 -4 25 65 0 0 chr5_random 2837347 2837393 -941090 + AT_rich Low_complexity Low_complexity 1 46 0 247 337 46 5 chr5_random 2837658 2837854 -940629 - L1ME LINE L1 -264 5857 5654 3876 138 6 8 chr5_random 2837878 2838501 -939982 - L1PA15 LINE L1 0 6165 5544 1680 153 55 24 chr5_random 2838504 2839057 -939426 - LTR1B LTR ERV1 0 826 218 1797 151 52 12 chr5_random 2839058 2839383 -939100 - LTR1B LTR ERV1 -488 338 1 1085 144 53 0 chr5_random 2839383 2839571 -938912 - L1PA15 LINE L1 -621 5544 5347 374 136 418 0 chr5_random 2839576 2839686 -938797 - LTR1B LTR ERV1 -242 584 429 1314 199 39 0 chr5_random 2839729 2840036 -938447 - L1PA15 LINE L1 -864 5282 4964 2395 181 116 16 chr5_random 2840036 2842954 -935529 - SATR1 Satellite Satellite -4 3210 1 1927 193 126 3 chr5_random 2842970 2843885 -934598 + SATR1 Satellite Satellite 1 1028 -105 255 172 17 0 chr5_random 2844051 2844109 -934374 + (TA)n Simple_repeat Simple_repeat 2 60 0 1125 226 32 57 chr5_random 2844903 2845186 -933297 - AluJb SINE Alu -24 288 13 533 232 0 0 chr5_random 2845724 2845823 -932660 + FLAM_A SINE Alu 1 99 -43 1854 139 0 60 chr5_random 2846076 2846405 -932078 + AluSx SINE Alu 1 311 0 966 232 32 63 chr5_random 2846593 2846878 -931605 - AluJb SINE Alu -24 288 13 6323 53 1 0 chr5_random 2847250 2848027 -930456 - L1PA5 LINE L1 -1 6153 5376 1565 199 0 7 chr5_random 2848412 2848694 -929789 - AluJb SINE Alu -30 282 3 1312 223 10 34 chr5_random 2848728 2849024 -929459 + AluJo SINE Alu 1 289 -23 2255 96 0 0 chr5_random 2849221 2849513 -928970 + AluY SINE Alu 3 294 -17 240 183 195 12 chr5_random 2850327 2850409 -928074 - MER5A DNA MER1_type -83 106 10 1919 158 0 0 chr5_random 2853611 2853914 -924569 - AluSx SINE Alu -4 308 6 22 56 0 0 chr5_random 2854026 2854062 -924421 + AT_rich Low_complexity Low_complexity 1 36 0 2146 109 0 0 chr5_random 2855687 2856019 -922464 + AluSp SINE Alu 2 333 0 1311 176 13 13 chr5_random 2856195 2856467 -922016 + AluSp SINE Alu 63 334 0 1952 156 7 0 chr5_random 2856904 2857205 -921278 + AluSx SINE Alu 1 303 -9 206 225 0 0 chr5_random 2857487 2857527 -920956 + L2 LINE L2 3262 3301 -12 1209 247 41 7 chr5_random 2857747 2858039 -920444 - AluJo SINE Alu -10 302 1 25 0 0 0 chr5_random 2858740 2858765 -919718 + AT_rich Low_complexity Low_complexity 1 25 0 538 94 24 0 chr5_random 2860766 2860851 -917632 + L1PA5 LINE L1 6066 6152 -2 24 53 0 0 chr5_random 2862463 2862501 -915982 + AT_rich Low_complexity Low_complexity 1 38 0 23 33 0 0 chr5_random 2862577 2862607 -915876 + AT_rich Low_complexity Low_complexity 1 30 0 1892 146 0 3 chr5_random 2862811 2863121 -915362 - AluSq SINE Alu 0 309 1 538 293 78 9 chr5_random 2863235 2863467 -915016 + L1MB7 LINE L1 5396 5643 -478 23 0 0 0 chr5_random 2864497 2864520 -913963 + AT_rich Low_complexity Low_complexity 1 23 0 297 0 0 0 chr5_random 2865280 2865313 -913170 + (TG)n Simple_repeat Simple_repeat 2 34 0 1014 259 29 0 chr5_random 2866566 2866840 -911643 + L1MB7 LINE L1 5903 6184 0 379 319 57 19 chr5_random 2867559 2867716 -910767 - L2 LINE L2 -430 2884 2722 23 33 0 0 chr5_random 2867814 2867844 -910639 + AT_rich Low_complexity Low_complexity 1 30 0 1827 215 76 32 chr5_random 2868677 2869175 -909308 - L1MB8 LINE L1 -6 6172 5653 206 233 50 0 chr5_random 2870190 2870250 -908233 - MIR SINE MIR -2 260 198 1241 188 0 59 chr5_random 2870273 2870544 -907939 + AluJb SINE Alu 38 292 -20 2122 148 0 0 chr5_random 2870964 2871274 -907209 + AluSx SINE Alu 2 311 -1 191 268 0 0 chr5_random 2871533 2871574 -906909 - L2 LINE L2 -1045 2269 2229 2148 130 0 3 chr5_random 2871633 2871940 -906543 + AluSg SINE Alu 4 309 -1 1798 127 73 0 chr5_random 2873792 2874067 -904416 - AluSg SINE Alu -15 295 1 308 172 0 16 chr5_random 2874335 2874399 -904084 + MER34C LTR ERV1 423 485 -100 22 35 0 0 chr5_random 2874406 2874435 -904048 + AT_rich Low_complexity Low_complexity 1 29 0 1783 177 23 0 chr5_random 2875009 2875309 -903174 + AluSq SINE Alu 1 307 -6 21 36 0 0 chr5_random 2875473 2875501 -902982 + AT_rich Low_complexity Low_complexity 1 28 0 2987 140 24 6 chr5_random 2875692 2876186 -902297 - L1PA10 LINE L1 -11 6157 5655 1163 211 102 30 chr5_random 2876281 2876642 -901841 - MER4E LTR ERV1 -391 388 2 1191 206 75 12 chr5_random 2876864 2877185 -901298 - L1MB8 LINE L1 -5 6173 5833 1965 147 96 5 chr5_random 2877196 2877590 -900893 - MER61C LTR ERV1 -10 424 11 2189 193 55 48 chr5_random 2877599 2878649 -899834 - L1MB8 LINE L1 -342 5836 4776 620 278 83 6 chr5_random 2879981 2880348 -898135 - MLT1G1 LTR MaLR -23 572 79 1451 170 65 0 chr5_random 2880384 2880660 -897823 - L1MA5 LINE L1 -6 6294 6001 1185 209 22 95 chr5_random 2880667 2880983 -897500 - AluJo SINE Alu -9 293 1 2921 221 29 15 chr5_random 2880984 2882109 -896374 - L1MA5 LINE L1 -354 5946 4808 1388 189 34 28 chr5_random 2882222 2882513 -895970 - AluJo SINE Alu -14 298 6 400 248 0 0 chr5_random 2884921 2885022 -893461 - L1MA9 LINE L1 -49 6263 6163 1561 140 4 16 chr5_random 2885969 2886212 -892271 - AluSg SINE Alu -11 299 60 559 185 0 0 chr5_random 2886327 2886419 -892064 + MER57B-int LTR ERV1 7051 7142 -395 2180 107 3 0 chr5_random 2886419 2886710 -891773 - AluY SINE Alu -19 292 1 714 116 31 31 chr5_random 2886725 2886854 -891629 + LTR54B LTR ERV1 3 131 -367 1396 135 131 0 chr5_random 2886854 2887083 -891400 + MER57B-int LTR ERV1 7279 7537 0 2507 138 90 2 chr5_random 2887083 2887482 -891001 + MER57B LTR ERV1 1 434 0 1061 109 18 43 chr5_random 2887523 2887716 -890767 + LTR6A LTR ERV1 1 182 -376 372 253 38 46 chr5_random 2889325 2889570 -888913 + MLT1H1 LTR MaLR 311 549 0 2340 76 7 0 chr5_random 2891122 2891411 -887072 - AluSg SINE Alu -19 291 1 928 219 48 69 chr5_random 2891989 2892368 -886115 + MER66A LTR ERV1 68 438 -40 813 270 108 3 chr5_random 2892908 2893215 -885268 - L1M4 LINE L1 -1675 4471 4133 2387 78 0 19 chr5_random 2893330 2893639 -884844 + AluY SINE Alu 1 303 -8 1039 214 20 34 chr5_random 2893640 2893935 -884548 + L1MA3 LINE L1 2968 3258 -2888 1066 158 56 0 chr5_random 2894042 2894257 -884226 + AluSg/x SINE Alu 70 296 -14 8347 147 8 30 chr5_random 2894275 2895637 -882846 + L1MA3 LINE L1 3475 4865 -1440 2115 70 4 22 chr5_random 2895637 2895910 -882573 - AluY SINE Alu -8 303 36 8347 147 8 30 chr5_random 2895910 2896345 -882138 + L1MA3 LINE L1 4865 5308 -997 1578 191 55 3 chr5_random 2896345 2896638 -881845 + AluJb SINE Alu 1 308 -4 8347 147 8 30 chr5_random 2896638 2897287 -881196 + L1MA3 LINE L1 5308 6008 -297 2824 168 60 8 chr5_random 2897287 2897805 -880678 - MER52A LTR ERV1 0 1755 1211 2360 120 43 0 chr5_random 2898615 2898989 -879494 - LTR49-int LTR ERV1 -635 5696 5307 14727 105 12 3 chr5_random 2899001 2904193 -874290 - L1PA7 LINE L1 -4 6465 1162 631 130 0 0 chr5_random 2904191 2904283 -874200 - L1PA7 LINE L1 -6365 96 5 * 4233 184 66 85 chr5_random 2904283 2905071 -873412 - LTR49-int LTR ERV1 -919 5318 4516 1661 192 3 10 chr5_random 2905071 2905368 -873115 - AluJb SINE Alu -16 296 2 4233 184 66 85 chr5_random 2905368 2905764 -872719 - LTR49-int LTR ERV1 -1721 4516 4114 2064 141 7 0 chr5_random 2905764 2906063 -872420 + AluSx SINE Alu 1 301 -11 4233 184 66 85 chr5_random 2906063 2906171 -872312 - LTR49-int LTR ERV1 -2123 4114 4005 1787 184 3 7 chr5_random 2906171 2906481 -872002 - AluJb SINE Alu -3 309 1 4233 184 66 85 chr5_random 2906481 2906807 -871676 - LTR49-int LTR ERV1 -2232 4005 2486 288 191 0 0 chr5_random 2907098 2907145 -871338 + G-rich Low_complexity Low_complexity 1 47 0 1243 176 0 18 chr5_random 2907175 2907397 -871086 + AluJo SINE Alu 72 289 -23 2284 143 39 11 chr5_random 2907423 2907864 -870619 - LTR49-int LTR ERV1 -6658 1462 1010 1625 167 6 54 chr5_random 2907874 2908191 -870292 + AluJo SINE Alu 3 304 -8 907 217 40 80 chr5_random 2908218 2908428 -870055 - LTR57-int LTR ERVL -4768 575 358 1903 171 0 0 chr5_random 2908428 2908721 -869762 + AluSx SINE Alu 1 293 -19 189 0 0 0 chr5_random 2908723 2908744 -869739 + (TA)n Simple_repeat Simple_repeat 1 21 0 2076 136 0 0 chr5_random 2908746 2909033 -869450 + AluSx SINE Alu 1 287 -25 390 42 0 0 chr5_random 2909035 2909083 -869400 + (TG)n Simple_repeat Simple_repeat 1 48 0 907 217 40 80 chr5_random 2909083 2909139 -869344 - LTR57-int LTR ERVL -4988 355 311 304 289 19 19 chr5_random 2909299 2909403 -869080 - LTR49-int LTR ERV1 -3811 2520 2417 2064 130 13 0 chr5_random 2909798 2910099 -868384 - AluSp SINE Alu -8 305 1 1794 82 0 0 chr5_random 2910215 2910435 -868048 - AluY SINE Alu -91 220 1 2131 129 3 9 chr5_random 2910469 2910794 -867689 - HERVK9 LTR ERVK -1011 4905 4583 1991 39 0 0 chr5_random 2910795 2911025 -867458 - HERVK9 LTR ERVK -1976 3940 3711 19933 90 11 18 chr5_random 2911025 2913005 -865478 - HERVK9 LTR ERVK -3130 2786 770 185 250 0 83 chr5_random 2913005 2913065 -865418 - MER5B DNA MER1_type -69 109 55 19933 90 11 18 chr5_random 2913065 2913830 -864653 - HERVK9 LTR ERVK -5146 770 1 3919 113 0 4 chr5_random 2913830 2914343 -864140 - MER9 LTR ERVK 0 511 1 12994 93 7 1 chr5_random 2914343 2916118 -862365 - HERVK14 LTR ERVK -4055 1890 1 1932 63 0 2 chr5_random 2916118 2916402 -862081 - LTR14A LTR ERVK 0 344 1 3263 215 27 17 chr5_random 2916410 2917193 -861290 + L1 LINE L1 4063 4853 -1293 887 303 61 10 chr5_random 2917198 2917508 -860975 - LTR40a LTR ERVL -192 327 2 183 42 0 0 chr5_random 2917791 2917815 -860668 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 600 118 11 0 chr5_random 2917818 2917911 -860572 - L1PB1 LINE L1 -13 6138 6045 277 109 22 0 chr5_random 2918289 2918335 -860148 + MADE1 DNA Mariner 34 80 0 1911 162 18 126 chr5_random 2918593 2919092 -859391 + MER65A LTR ERV1 1 445 0 22 0 0 0 chr5_random 2919149 2919171 -859312 + AT_rich Low_complexity Low_complexity 1 22 0 2142 130 3 3 chr5_random 2921232 2921539 -856944 - AluSg SINE Alu -1 309 3 2373 132 15 103 chr5_random 2922080 2922556 -855927 + MER57B LTR ERV1 1 434 0 1834 220 276 0 chr5_random 2922696 2923206 -855277 + MER52A LTR ERV1 1 651 -1104 4063 177 36 22 chr5_random 2923218 2923958 -854525 + MER52A LTR ERV1 1005 1755 0 4229 108 24 49 chr5_random 2923958 2924616 -853867 + MER52A-int LTR ERV1 88 729 -6808 1383 188 69 0 chr5_random 2924614 2924859 -853624 + MER52A-int LTR ERV1 1350 1611 -5926 * 2014 125 3 3 chr5_random 2924895 2925190 -853293 + AluSp SINE Alu 1 295 -18 354 110 330 11 chr5_random 2925195 2925286 -853197 + MER57-int LTR ERV1 4349 4468 -3069 26953 61 1 3 chr5_random 2925286 2928676 -849807 + L1P LINE L1 1 3382 -2764 2000 141 7 0 chr5_random 3528700 3528999 -249484 - AluSp SINE Alu -12 301 1 1146 67 0 0 chr5_random 3528999 3529133 -249350 - AluY SINE Alu -177 134 1 25 31 0 0 chr5_random 3529144 3529176 -249307 + AT_rich Low_complexity Low_complexity 1 32 0 864 96 88 0 chr5_random 3529195 3529320 -249163 + AluSc SINE Alu 160 295 -14 360 190 0 0 chr5_random 3529323 3529381 -249102 + MLT1B LTR MaLR 331 388 -2 28 29 0 0 chr5_random 3529402 3529437 -249046 + AT_rich Low_complexity Low_complexity 1 35 0 1478 172 63 0 chr5_random 3529444 3529682 -248801 - AluJo SINE Alu -59 253 1 1706 176 22 50 chr5_random 3529796 3530154 -248329 + L1PA16 LINE L1 5803 6150 -16 22 56 0 0 chr5_random 3530274 3530310 -248173 + AT_rich Low_complexity Low_complexity 1 36 0 525 289 53 32 chr5_random 3530484 3530674 -247809 - MIR SINE MIR -49 213 20 186 357 71 10 chr5_random 3530695 3530793 -247690 - L2 LINE L2 -9 3263 3160 1972 286 99 45 chr5_random 3530951 3531062 -247421 - L1MDa LINE L1 -4993 1547 1444 1894 152 4 0 chr5_random 3531062 3531339 -247144 - AluSx SINE Alu -34 278 1 1972 286 99 45 chr5_random 3531339 3531533 -246950 - L1MDa LINE L1 -5096 1444 1262 2277 118 0 0 chr5_random 3531533 3531838 -246645 - AluSx SINE Alu -7 305 1 1972 286 99 45 chr5_random 3531838 3532767 -245716 - L1MDa LINE L1 -5278 1262 244 1840 84 15 4 chr5_random 3532767 3533028 -245455 - AluYa5 SINE Alu -2 309 46 6249 61 7 4 chr5_random 3533511 3534565 -243918 - L1P1 LINE L1 -479 5676 4621 299 212 153 0 chr5_random 3536210 3536295 -242188 + MER5A DNA MER1_type 9 106 -83 778 148 0 0 chr5_random 3536435 3536543 -241940 + AluSg/x SINE Alu 188 295 -17 951 101 0 8 chr5_random 3537004 3537133 -241350 + AluSq/x SINE Alu 5 132 -180 1648 101 0 0 chr5_random 3537136 3537353 -241130 + AluY SINE Alu 1 217 -94 399 21 0 0 chr5_random 3538250 3538298 -240185 + (GTTTG)n Simple_repeat Simple_repeat 1 48 0 1999 134 4 0 chr5_random 3538298 3538573 -239910 - AluSx SINE Alu -31 281 6 819 95 9 0 chr5_random 3539292 3539408 -239075 - AluSp/q SINE Alu -20 293 177 2225 97 10 0 chr5_random 3540299 3540597 -237886 - AluY SINE Alu -10 301 1 1852 125 0 39 chr5_random 3540678 3540983 -237500 - AluY SINE Alu -8 303 11 649 128 147 10 chr5_random 3541067 3541196 -237287 - AluSg/x SINE Alu 0 310 168 550 209 31 23 chr5_random 3541197 3541326 -237157 - L1PA16 LINE L1 -46 6120 5991 1397 189 55 46 chr5_random 3541354 3541661 -236822 - AluJo SINE Alu -2 310 1 1135 171 25 49 chr5_random 3541711 3541956 -236527 - L1PA16 LINE L1 -136 6030 5792 251 127 0 18 chr5_random 3542348 3542403 -236080 + (TG)n Simple_repeat Simple_repeat 2 55 0 2069 83 4 11 chr5_random 3542405 3542682 -235801 - AluY SINE Alu -36 275 1 1749 104 8 0 chr5_random 3542684 3542924 -235559 - AluSq SINE Alu -17 296 55 1889 129 16 22 chr5_random 3543257 3543568 -234915 - AluSx SINE Alu -3 309 1 1689 107 138 4 chr5_random 3543568 3543829 -234654 - AluSg SINE Alu -11 299 4 311 198 9 190 chr5_random 3544010 3544126 -234357 - Tigger7 DNA MER2_type -1 2486 2392 190 244 0 0 chr5_random 3544557 3544598 -233885 - MIR SINE MIR -38 224 184 1125 194 0 9 chr5_random 3544920 3545165 -233318 + AluJb SINE Alu 92 312 0 1899 94 77 25 chr5_random 3545724 3546010 -232473 + AluSp SINE Alu 1 301 -12 1413 268 91 20 chr5_random 3546118 3546910 -231573 + L2 LINE L2 2473 3313 0 514 263 140 6 chr5_random 3546924 3547095 -231388 + MLT1L LTR MaLR 414 607 -8 927 173 25 0 chr5_random 3547280 3547442 -231041 - AluJ SINE Alu -18 294 129 1113 201 0 9 chr5_random 3547761 3547975 -230508 - AluJo SINE Alu -11 301 90 358 157 15 25 chr5_random 3547976 3548057 -230426 - AluJo/FLAM SINE Alu -180 122 75 832 150 0 0 chr5_random 3548098 3548211 -230272 - FLAM_A SINE Alu -17 116 4 2073 107 10 3 chr5_random 3548233 3548532 -229951 + AluY SINE Alu 1 301 -10 417 183 14 0 chr5_random 3548532 3548603 -229880 - AluJo/FLAM SINE Alu -191 121 50 1964 142 0 0 chr5_random 3548804 3549086 -229397 + AluSx SINE Alu 1 282 -30 186 43 0 0 chr5_random 3549088 3549111 -229372 + (CATA)n Simple_repeat Simple_repeat 2 24 0 1886 123 33 17 chr5_random 3549568 3549870 -228613 - AluSx SINE Alu -5 307 1 405 181 26 13 chr5_random 3550298 3550453 -228030 + (TAGA)n Simple_repeat Simple_repeat 3 159 0 532 115 64 0 chr5_random 3550578 3550879 -227604 + (TAGA)n Simple_repeat Simple_repeat 1 320 0 638 304 55 5 chr5_random 3550989 3551190 -227293 - MLT1A1 LTR MaLR 0 365 155 273 316 32 0 chr5_random 3551200 3551295 -227188 - MLT1A2 LTR MaLR -98 276 179 313 239 15 0 chr5_random 3551310 3551377 -227106 - MLT1A2 LTR MaLR -98 276 209 2089 125 0 0 chr5_random 3551466 3551857 -226626 - AluSg SINE Alu 0 391 1 237 288 0 0 chr5_random 3551859 3551925 -226558 - MLT1A2 LTR MaLR -210 155 90 1493 219 0 3 chr5_random 3551964 3552256 -226227 - AluJb SINE Alu -15 297 7 188 35 35 0 chr5_random 3552288 3552317 -226166 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 2074 111 4 0 chr5_random 3552324 3552603 -225880 - AluSx SINE Alu -26 286 7 2341 95 0 16 chr5_random 3552625 3552942 -225541 - AluSx SINE Alu 0 312 1 2238 92 0 49 chr5_random 3553186 3553513 -224970 - AluY SINE Alu 0 311 1 1764 119 7 34 chr5_random 3553523 3553817 -224666 - AluSg SINE Alu -24 286 1 417 139 42 0 chr5_random 3553820 3553892 -224591 - AluSg/x SINE Alu -17 292 218 2449 71 0 13 chr5_random 3554003 3554314 -224169 - AluY SINE Alu 0 311 5 2247 80 3 49 chr5_random 3554314 3554640 -223843 - AluY SINE Alu 0 311 1 204 40 0 0 chr5_random 3555321 3555346 -223137 + (GA)n Simple_repeat Simple_repeat 1 25 0 2084 97 7 45 chr5_random 3555357 3555666 -222817 + AluSx SINE Alu 1 297 -15 444 168 43 31 chr5_random 3555761 3556273 -222210 + (TAGA)n Simple_repeat Simple_repeat 1 518 0 203 149 54 0 chr5_random 3556292 3556366 -222117 + (TAGA)n Simple_repeat Simple_repeat 4 81 0 450 163 34 7 chr5_random 3556393 3556540 -221943 + (TAGA)n Simple_repeat Simple_repeat 1 151 0 180 189 40 0 chr5_random 3556554 3556628 -221855 + (TAGA)n Simple_repeat Simple_repeat 1 77 0 408 177 34 7 chr5_random 3556655 3556802 -221681 + (TAGA)n Simple_repeat Simple_repeat 1 151 0 439 166 35 12 chr5_random 3556825 3556994 -221489 + (TAGA)n Simple_repeat Simple_repeat 3 175 0 484 143 52 0 chr5_random 3557006 3557160 -221323 + (TAGA)n Simple_repeat Simple_repeat 4 165 0 451 173 37 23 chr5_random 3557200 3557548 -220935 + (TAGA)n Simple_repeat Simple_repeat 1 353 0 550 144 39 8 chr5_random 3557572 3557839 -220644 + (TAGA)n Simple_repeat Simple_repeat 1 275 0 542 147 45 0 chr5_random 3557863 3558020 -220463 + (TAGA)n Simple_repeat Simple_repeat 4 167 0 434 171 24 18 chr5_random 3558072 3558242 -220241 + (TAGA)n Simple_repeat Simple_repeat 1 171 0 470 132 63 0 chr5_random 3558296 3558455 -220028 + (TAGA)n Simple_repeat Simple_repeat 4 172 0 288 0 0 0 chr5_random 3559742 3559774 -218709 + (TG)n Simple_repeat Simple_repeat 1 32 0 953 8 25 8 chr5_random 3560556 3560676 -217807 - AluYa5/8 SINE Alu -189 122 1 846 251 21 17 chr5_random 3560677 3560912 -217571 - L1MDa LINE L1 -6288 252 17 1281 268 54 39 chr5_random 3560937 3561509 -216974 - L1MDa LINE L1 -4644 1896 1316 1919 145 14 3 chr5_random 3561509 3561805 -216678 - AluSx SINE Alu -11 301 3 250 340 0 0 chr5_random 3561849 3561946 -216537 - L1MDa LINE L1 -5903 627 531 1346 243 118 33 chr5_random 3562026 3563291 -215192 - L1ME1 LINE L1 -1 6182 4768 689 262 65 60 chr5_random 3564943 3565310 -213173 - L1ME3A LINE L1 -132 6038 5670 2221 121 0 13 chr5_random 3565347 3565661 -212822 - AluSx SINE Alu 0 312 3 314 268 188 7 chr5_random 3565778 3565916 -212567 + MIR SINE MIR 43 205 -57 2224 126 0 0 chr5_random 3565924 3566234 -212249 - AluSx SINE Alu -1 311 2 1254 228 143 105 chr5_random 3566899 3567135 -211348 - MLT1E2 LTR MaLR -2 624 398 2248 96 3 22 chr5_random 3567135 3567448 -211035 - AluSc SINE Alu -2 307 1 1254 228 143 105 chr5_random 3567448 3567839 -210644 - MLT1E2 LTR MaLR -228 398 1 907 150 34 7 chr5_random 3569131 3569278 -209205 - MSTA LTR MaLR -9 417 267 1256 114 6 0 chr5_random 3569278 3569454 -209029 + AluSq SINE Alu 134 310 -3 1337 190 78 15 chr5_random 3569461 3569729 -208754 - MSTA LTR MaLR -143 285 1 395 322 53 34 chr5_random 3569894 3570102 -208381 - HAL1 LINE L1 -891 1616 1405 201 236 0 55 chr5_random 3570213 3570268 -208215 + MIR3 SINE MIR 110 161 -47 274 269 34 17 chr5_random 3570337 3570456 -208027 - HAL1 LINE L1 -1253 1254 1134 1867 168 0 10 chr5_random 3570971 3571274 -207209 - AluJb SINE Alu -12 300 1 29 28 0 0 chr5_random 3571336 3571372 -207111 + AT_rich Low_complexity Low_complexity 1 36 0 1554 85 0 0 chr5_random 3572297 3572486 -205997 - AluY SINE Alu -117 194 6 509 280 13 72 chr5_random 3575204 3575440 -203043 - L1MEc LINE L1 -6135 261 40 235 161 143 18 chr5_random 3575438 3575494 -202989 + L1PA12 LINE L1 1256 1318 -6263 * 193 284 0 54 chr5_random 3575718 3575792 -202691 + L2 LINE L2 3244 3313 0 415 254 121 59 chr5_random 3576256 3576579 -201904 - L1ME4a LINE L1 -256 5865 5523 1802 170 7 3 chr5_random 3576622 3576916 -201567 + AluSg SINE Alu 1 295 -15 23 33 0 0 chr5_random 3577045 3577075 -201408 + AT_rich Low_complexity Low_complexity 1 30 0 5768 72 20 1 chr5_random 3577664 3578416 -200067 - MER4E LTR ERV1 0 766 1 2575 58 0 6 chr5_random 3578769 3579082 -199401 + AluY SINE Alu 1 311 0 22 56 0 0 chr5_random 3579106 3579142 -199341 + AT_rich Low_complexity Low_complexity 1 36 0 22 56 0 0 chr5_random 3581655 3581691 -196792 + AT_rich Low_complexity Low_complexity 1 36 0 349 307 84 0 chr5_random 3581830 3581996 -196487 - L2 LINE L2 -409 2905 2726 36 0 0 0 chr5_random 3582636 3582672 -195811 + AT_rich Low_complexity Low_complexity 1 36 0 33 0 0 0 chr5_random 3582698 3582731 -195752 + AT_rich Low_complexity Low_complexity 1 33 0 869 201 22 11 chr5_random 3583719 3583903 -194580 - MER58A DNA MER1_type 0 224 39 291 173 115 0 chr5_random 3583961 3584022 -194461 - L1M3 LINE L1 -526 5779 5728 1991 149 37 3 chr5_random 3584608 3584956 -193527 - MER46B DNA MER2_type 0 236 2 525 165 37 94 chr5_random 3587796 3587937 -190546 + MER33 DNA MER1_type 51 229 -2356 1600 119 8 8 chr5_random 3587937 3588173 -190310 - AluSq SINE Alu -22 291 56 525 165 37 94 chr5_random 3588173 3588263 -190220 + MER33 DNA MER1_type 229 323 -1 2008 159 0 0 chr5_random 3588608 3588916 -189567 + AluSx SINE Alu 1 308 -4 2362 76 0 25 chr5_random 3588993 3589309 -189174 - AluY SINE Alu -3 308 1 327 145 66 26 chr5_random 3589623 3589699 -188784 - MER116 DNA Mariner -1 79 1 21 0 0 0 chr5_random 3590333 3590354 -188129 + AT_rich Low_complexity Low_complexity 1 21 0 1789 224 51 45 chr5_random 3590572 3590984 -187499 + L1M4 LINE L1 3076 3484 -2662 1556 135 45 4 chr5_random 3590984 3591229 -187254 + AluSx SINE Alu 1 255 -57 2154 118 3 19 chr5_random 3591229 3591543 -186940 + AluSq SINE Alu 3 311 -2 1789 224 51 45 chr5_random 3591543 3591753 -186730 + L1M4 LINE L1 3483 3703 -2443 1522 184 71 7 chr5_random 3591755 3592038 -186445 + AluJo SINE Alu 5 305 -7 839 262 97 19 chr5_random 3592052 3592414 -186069 + L1ME1 LINE L1 5771 6160 -6 567 206 188 12 chr5_random 3593465 3593630 -184853 - MIR SINE MIR 0 262 69 783 237 0 0 chr5_random 3593830 3593986 -184497 - FRAM SINE Alu -20 156 1 2100 113 3 19 chr5_random 3594612 3594921 -183562 - AluSx SINE Alu -8 304 1 235 325 176 20 chr5_random 3597067 3597362 -181121 + L2 LINE L2 1181 1521 -1793 823 307 172 34 chr5_random 3597442 3598286 -180197 + L2 LINE L2 2029 3036 -277 1899 138 30 3 chr5_random 3598286 3598582 -179901 - AluSg SINE Alu -6 304 1 823 307 172 34 chr5_random 3598582 3598742 -179741 + L2 LINE L2 3036 3173 -140 1806 155 10 10 chr5_random 3600591 3600901 -177582 + AluSx SINE Alu 3 312 0 256 267 47 23 chr5_random 3601339 3601425 -177058 - MER5B DNA MER1_type -89 89 2 729 146 0 29 chr5_random 3601476 3601613 -176870 + FLAM_C SINE Alu 1 133 0 686 205 105 2 chr5_random 3602378 3602640 -175843 + MER33 DNA MER1_type 1 324 0 23 68 0 0 chr5_random 3604548 3604592 -173891 + AT_rich Low_complexity Low_complexity 1 44 0 1224 188 5 0 chr5_random 3606383 3606590 -171893 - AluJb SINE Alu -17 295 88 337 302 50 22 chr5_random 3606954 3607093 -171390 + L1MC4a LINE L1 5062 5204 -942 1093 147 39 56 chr5_random 3607100 3607331 -171152 + AluJo SINE Alu 86 312 0 1835 285 93 15 chr5_random 3607331 3608249 -170234 + L1MC4a LINE L1 5209 5403 -743 1588 276 134 37 chr5_random 3608287 3608474 -170009 + L1MC4 LINE L1 6460 6627 -1415 1437 131 32 0 chr5_random 3608474 3608573 -169910 + MER30 DNA MER1_type 2 96 -134 441 0 0 0 chr5_random 3608573 3608622 -169861 + (CA)n Simple_repeat Simple_repeat 2 50 0 1437 131 32 0 chr5_random 3608622 3608743 -169740 + MER30 DNA MER1_type 96 229 -1 1588 276 134 37 chr5_random 3608743 3609248 -169235 + L1MC4 LINE L1 6627 7278 -764 1969 134 3 3 chr5_random 3609248 3609573 -168910 - AluSx SINE Alu 0 327 3 1588 276 134 37 chr5_random 3609573 3609858 -168625 + L1MC4 LINE L1 7278 7534 -508 389 321 62 24 chr5_random 3609962 3610171 -168312 + L1MC4 LINE L1 7691 7919 -123 315 49 0 0 chr5_random 3610171 3610212 -168271 + (CA)n Simple_repeat Simple_repeat 2 42 0 389 321 62 24 chr5_random 3610212 3610341 -168142 + L1MC4 LINE L1 7919 8042 0 532 304 172 0 chr5_random 3610723 3610927 -167556 - MIR SINE MIR -22 240 2 25 31 0 0 chr5_random 3611191 3611223 -167260 + AT_rich Low_complexity Low_complexity 1 32 0 24 0 0 0 chr5_random 3611468 3611492 -166991 + AT_rich Low_complexity Low_complexity 1 24 0 874 239 88 45 chr5_random 3613228 3613580 -164903 + L1ME1 LINE L1 5694 6060 -106 257 176 0 0 chr5_random 3613584 3613635 -164848 + L1MA10 LINE L1 6284 6334 0 385 280 188 19 chr5_random 3614220 3614427 -164056 + MIR SINE MIR 11 252 -10 1902 147 17 0 chr5_random 3616900 3617199 -161284 - AluSx SINE Alu -8 304 1 719 195 69 6 chr5_random 3617318 3617477 -161006 - MER58C DNA MER1_type -2 213 45 511 348 149 39 chr5_random 3617507 3618178 -160305 + L2 LINE L2 1837 2661 -653 580 89 0 0 chr5_random 3618178 3618257 -160226 + MADE1 DNA Mariner 2 80 0 511 348 149 39 chr5_random 3618257 3618612 -159871 + L2 LINE L2 2661 2976 -338 2068 119 3 0 chr5_random 3618645 3618938 -159545 + AluSx SINE Alu 1 294 -18 589 240 155 11 chr5_random 3619512 3619783 -158700 + Charlie5 DNA MER1_type 15 2624 0 572 311 55 13 chr5_random 3621080 3621363 -157120 + L2 LINE L2 2723 3017 -296 243 325 0 18 chr5_random 3621740 3621854 -156629 - MIR SINE MIR -3 259 148 2076 128 0 10 chr5_random 3622060 3622373 -156110 + AluSg SINE Alu 1 310 0 22 0 0 0 chr5_random 3623321 3623343 -155140 + AT_rich Low_complexity Low_complexity 1 22 0 1411 106 0 0 chr5_random 3625954 3626142 -152341 + AluY SINE Alu 7 194 -117 24 0 0 0 chr5_random 3626183 3626207 -152276 + AT_rich Low_complexity Low_complexity 1 24 0 29 28 0 0 chr5_random 3627062 3627098 -151385 + AT_rich Low_complexity Low_complexity 1 36 0 1910 142 0 23 chr5_random 3627160 3627469 -151014 + AluJb SINE Alu 1 302 -10 266 269 34 17 chr5_random 3627982 3628101 -150382 + HAL1 LINE L1 1134 1254 -1253 188 216 0 0 chr5_random 3628188 3628225 -150258 - MIR SINE MIR -62 146 110 328 333 57 48 chr5_random 3628336 3628546 -149937 + HAL1 LINE L1 1405 1616 -891 1346 172 81 8 chr5_random 3628709 3628970 -149513 + MSTB LTR MaLR 1 280 -146 1242 93 6 0 chr5_random 3628995 3629157 -149326 - AluSq SINE Alu -17 296 134 870 150 34 7 chr5_random 3629157 3629304 -149179 + MSTB LTR MaLR 267 417 -9 318 328 0 25 chr5_random 3629305 3629427 -149056 - L1MC4 LINE L1 -1348 6694 6576 * 447 298 118 64 chr5_random 3629410 3630132 -148351 + L1ME1 LINE L1 2257 3017 -3129 1151 236 136 94 chr5_random 3630659 3631052 -147431 + MLT1E2 LTR MaLR 1 403 -223 2213 101 3 25 chr5_random 3631052 3631368 -147115 + AluSc SINE Alu 1 309 0 1151 236 136 94 chr5_random 3631368 3631600 -146883 + MLT1E2 LTR MaLR 403 624 -2 307 265 99 77 chr5_random 3632227 3632265 -146218 - MIR SINE MIR -35 227 191 2303 116 0 0 chr5_random 3632265 3632575 -145908 + AluSx SINE Alu 2 311 -1 307 265 99 77 chr5_random 3632575 3632717 -145766 - MIR SINE MIR -71 191 43 2278 110 0 13 chr5_random 3632835 3633143 -145340 + AluSx SINE Alu 4 307 -5 677 252 75 55 chr5_random 3633195 3633580 -144903 + L1ME3A LINE L1 5670 6062 -108 1231 243 115 43 chr5_random 3635101 3636361 -142122 + L1ME1 LINE L1 4768 6165 -1 21 0 0 0 chr5_random 3636371 3636392 -142091 + AT_rich Low_complexity Low_complexity 1 21 0 313 360 48 0 chr5_random 3636413 3636538 -141945 + L1ME LINE L1 339 469 -5903 1912 145 14 3 chr5_random 3636582 3636878 -141605 + AluSx SINE Alu 3 301 -11 1103 292 43 35 chr5_random 3636878 3637457 -141026 + L1ME LINE L1 1050 1633 -4751 4064 259 96 32 chr5_random 3637474 3638630 -139853 + L1MDa LINE L1 17 1098 -5442 2290 118 0 0 chr5_random 3638630 3638936 -139547 + AluSx SINE Alu 1 306 -6 4064 259 96 32 chr5_random 3638936 3639130 -139353 + L1MDa LINE L1 1098 1278 -5262 1903 152 4 0 chr5_random 3639130 3639407 -139076 + AluSx SINE Alu 1 278 -34 4064 259 96 32 chr5_random 3639407 3640074 -138409 + L1MDa LINE L1 1278 2164 -4376 2332 212 65 65 chr5_random 3640074 3640671 -137812 + Charlie1 DNA MER1_type 1443 2039 -722 1715 128 88 0 chr5_random 3640671 3640958 -137525 + AluSx SINE Alu 13 321 0 2332 212 65 65 chr5_random 3640958 3641083 -137400 + Charlie1 DNA MER1_type 2039 2163 -598 243 0 0 0 chr5_random 3641083 3641110 -137373 + (TA)n Simple_repeat Simple_repeat 1 27 0 1992 129 0 0 chr5_random 3641117 3641395 -137088 - AluSg1 SINE Alu -31 278 1 2332 212 65 65 chr5_random 3641395 3641533 -136950 + Charlie1 DNA MER1_type 2168 2314 -447 21 57 0 0 chr5_random 3641667 3641702 -136781 + AT_rich Low_complexity Low_complexity 1 35 0 5749 204 32 30 chr5_random 3641815 3643263 -135220 - Cheshire DNA MER1_type -761 1659 208 3124 148 63 2 chr5_random 3643263 3643852 -134631 + Tigger1 DNA MER2_type 439 1063 -1355 635 165 26 9 chr5_random 3643852 3643967 -134516 + AluJb SINE Alu 1 117 -195 207 0 0 0 chr5_random 3643972 3643995 -134488 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 7388 139 37 11 chr5_random 3643997 3644403 -134080 + Tigger1 DNA MER2_type 1079 1473 -945 1957 127 7 0 chr5_random 3644403 3644694 -133789 + AluSx SINE Alu 1 293 -19 7388 139 37 11 chr5_random 3644694 3645594 -132889 + Tigger1 DNA MER2_type 1473 2418 0 188 269 223 21 chr5_random 3645896 3646089 -132394 + L2 LINE L2 1664 1895 -1419 22 0 0 0 chr5_random 3646090 3646112 -132371 + AT_rich Low_complexity Low_complexity 1 22 0 1826 120 11 8 chr5_random 3646194 3646460 -132023 + AluSq SINE Alu 1 267 -46 2096 139 0 3 chr5_random 3646542 3646843 -131640 + AluSx SINE Alu 1 300 -12 775 140 37 104 chr5_random 3646853 3647017 -131466 + FRAM SINE Alu 1 152 -24 779 152 0 8 chr5_random 3647100 3647225 -131258 + FLAM_C SINE Alu 1 124 -9 1732 137 7 32 chr5_random 3647237 3647515 -130968 + AluSx SINE Alu 1 271 -41 542 290 38 108 chr5_random 3647515 3647782 -130701 + L2 LINE L2 2881 3165 -107 1985 100 7 4 chr5_random 3647782 3648052 -130431 + AluSx SINE Alu 1 271 -41 1301 50 0 0 chr5_random 3648052 3648211 -130272 + L1PA3 LINE L1 5990 6148 -7 542 290 38 108 chr5_random 3648211 3648311 -130172 + L2 LINE L2 3163 3223 -49 510 169 0 11 chr5_random 3649520 3649609 -128874 + FLAM_A SINE Alu 31 118 -24 200 0 0 91 chr5_random 3649609 3649642 -128841 + (T)n Simple_repeat Simple_repeat 1 30 0 207 0 0 0 chr5_random 3649776 3649799 -128684 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1203 178 14 5 chr5_random 3649801 3650020 -128463 - AluSq SINE Alu -13 300 80 404 288 86 18 chr5_random 3650205 3650368 -128115 + L1M4 LINE L1 3407 3580 -2566 666 191 272 21 chr5_random 3650377 3650612 -127871 - AluSg SINE Alu -5 295 2 368 333 19 0 chr5_random 3650612 3650774 -127709 - L1M4 LINE L1 -2387 3759 3595 2230 84 0 24 chr5_random 3650780 3651077 -127406 + AluY SINE Alu 1 290 -21 599 120 176 24 chr5_random 3651087 3651212 -127271 + FRAM SINE Alu 21 164 -12 263 273 93 12 chr5_random 3651247 3651408 -127075 - L1M4 LINE L1 -2566 3580 3407 475 118 0 0 chr5_random 3651713 3651781 -126702 + FRAM/FAM SINE Alu 20 87 -98 2220 124 0 0 chr5_random 3652151 3652449 -126034 + AluSx SINE Alu 1 298 -14 457 267 68 34 chr5_random 3652847 3653023 -125460 + MIR SINE MIR 80 261 -1 330 135 14 40 chr5_random 3653197 3653270 -125213 - MLT1F LTR MaLR -3 564 494 352 255 11 11 chr5_random 3653270 3653364 -125119 + MLT1E3 LTR MaLR 1 94 -560 392 184 0 0 chr5_random 3653392 3653468 -125015 + MLT1E3 LTR MaLR 78 153 -440 217 139 28 0 chr5_random 3653499 3653535 -124948 + GA-rich Low_complexity Low_complexity 3 39 0 685 256 119 40 chr5_random 3653579 3653856 -124627 + MLT1E3 LTR MaLR 263 561 -63 2070 136 10 3 chr5_random 3653859 3654161 -124322 - AluSp SINE Alu -9 304 1 3368 83 4 2 chr5_random 3654167 3654625 -123858 + L1PB1 LINE L1 5692 6150 -1 1418 255 129 2 chr5_random 3654789 3655201 -123282 - MLT1F LTR MaLR -78 464 1 355 224 79 7 chr5_random 3655224 3655376 -123107 - L1M4 LINE L1 -2932 3214 3052 1439 188 6 86 chr5_random 3655380 3655705 -122778 - AluJo SINE Alu -8 304 6 384 200 52 9 chr5_random 3655814 3655929 -122554 - L1ME3A LINE L1 0 6170 6051 541 234 46 6 chr5_random 3656430 3656605 -121878 - L1MC4a LINE L1 -1910 5898 5717 1478 224 120 11 chr5_random 3656605 3656634 -121849 + MLT1D LTR MaLR 1 25 -480 2327 100 0 10 chr5_random 3656634 3656944 -121539 + AluY SINE Alu 1 307 -4 1478 224 120 11 chr5_random 3656944 3657364 -121119 + MLT1D LTR MaLR 25 499 -6 675 259 117 12 chr5_random 3657376 3657623 -120860 - L1MC4a LINE L1 -2083 5725 5453 180 0 0 0 chr5_random 3658324 3658344 -120139 + (TG)n Simple_repeat Simple_repeat 2 21 0 2064 113 17 10 chr5_random 3658485 3658787 -119696 - AluSq SINE Alu -9 304 1 218 300 81 19 chr5_random 3659460 3659620 -118863 + MIR SINE MIR 57 226 -36 414 0 0 0 chr5_random 3660053 3660099 -118384 + (TA)n Simple_repeat Simple_repeat 2 47 0 319 287 83 0 chr5_random 3660156 3660264 -118219 + L2 LINE L2 3156 3272 0 235 252 39 39 chr5_random 3660398 3660501 -117982 - MER106B DNA MER1_type -904 155 53 208 275 22 66 chr5_random 3660902 3660993 -117490 - MER5A DNA MER1_type -99 90 4 884 192 142 31 chr5_random 3661023 3661343 -117140 - LTR37A LTR ERV1 0 426 56 1521 191 28 14 chr5_random 3661343 3661625 -116858 + AluJb SINE Alu 1 286 -26 884 192 142 31 chr5_random 3661625 3661685 -116798 - LTR37A LTR ERV1 -370 56 4 2219 99 3 10 chr5_random 3661835 3662128 -116355 - AluSc SINE Alu -16 293 3 1007 162 19 33 chr5_random 3662338 3662548 -115935 + L1MB3 LINE L1 5707 5913 -270 335 239 63 64 chr5_random 3662567 3662855 -115628 + MER39 LTR ERV1 23 520 -187 1347 165 178 20 chr5_random 3662858 3663263 -115220 + LTR54B LTR ERV1 8 476 -22 225 214 0 0 chr5_random 3663337 3663379 -115104 + MER34 LTR ERV1 370 411 -131 469 147 80 8 chr5_random 3663415 3663542 -114941 + MER34B LTR ERV1 439 565 0 1277 120 16 50 chr5_random 3663542 3663604 -114879 + L1MB3 LINE L1 5910 5973 -210 1541 193 30 14 chr5_random 3663604 3663899 -114584 + AluJo SINE Alu 1 300 -12 1277 120 16 50 chr5_random 3663899 3664078 -114405 + L1MB3 LINE L1 5973 6143 -40 2151 89 3 11 chr5_random 3664078 3664360 -114123 + AluSc SINE Alu 1 280 -29 282 73 0 0 chr5_random 3664360 3664401 -114082 + (TA)n Simple_repeat Simple_repeat 1 41 0 398 269 144 25 chr5_random 3664422 3664582 -113901 - MIR SINE MIR -4 258 80 2117 128 0 0 chr5_random 3664981 3665279 -113204 - AluSx SINE Alu -14 298 1 336 257 118 7 chr5_random 3666788 3666924 -111559 - L1MEc LINE L1 -1498 4884 4734 1124 229 140 11 chr5_random 3666943 3667393 -111090 - L1MC4 LINE L1 -1983 5993 5486 1211 242 113 38 chr5_random 3667396 3668107 -110376 - L1MC4 LINE L1 -2665 3415 2652 243 290 65 0 chr5_random 3668126 3668233 -110250 - L1MC4 LINE L1 -5906 164 51 1653 197 14 0 chr5_random 3668292 3668586 -109897 - AluJb SINE Alu -14 298 1 453 241 66 91 chr5_random 3668603 3668947 -109536 - L1MEc LINE L1 -2412 3970 3636 1815 187 0 3 chr5_random 3668947 3669241 -109242 + AluJb SINE Alu 3 295 -17 453 241 66 91 chr5_random 3669241 3669291 -109192 - L1MEc LINE L1 -2746 3636 3586 2007 149 0 0 chr5_random 3669308 3669597 -108886 - AluJb SINE Alu -23 289 1 849 227 0 0 chr5_random 3669736 3669899 -108584 + AluJb SINE Alu 134 296 -16 398 262 148 27 chr5_random 3669901 3670025 -108458 - L1MEc LINE L1 -2943 3439 3285 2027 102 88 0 chr5_random 3670025 3670308 -108175 - AluSc SINE Alu -1 308 1 398 262 148 27 chr5_random 3670308 3670366 -108117 - L1MEc LINE L1 -3097 3285 3235 1355 155 9 5 chr5_random 3670366 3670585 -107898 + AluJb SINE Alu 85 304 -8 262 257 149 7 chr5_random 3670847 3671123 -107360 - L1MEc LINE L1 -3450 2932 2618 288 0 0 0 chr5_random 3671192 3671224 -107259 + (TG)n Simple_repeat Simple_repeat 2 33 0 982 228 56 48 chr5_random 3671229 3671497 -106986 - AluJo SINE Alu -42 270 1 626 181 0 0 chr5_random 3671964 3672080 -106403 - L1MD2 LINE L1 -10 6349 6234 1306 199 55 26 chr5_random 3672081 3672444 -106039 - L1MD2 LINE L1 -91 6075 5809 326 270 86 66 chr5_random 3672489 3672641 -105842 - L1MEc LINE L1 -4579 1984 1830 322 234 195 39 chr5_random 3672681 3672835 -105648 - L1ME3A LINE L1 -8 6162 5985 478 111 0 0 chr5_random 3672839 3672902 -105581 - AluS SINE Alu -248 65 3 949 167 7 0 chr5_random 3672922 3673072 -105411 - AluJb SINE Alu -26 286 136 962 259 97 29 chr5_random 3673092 3673354 -105129 - L1ME3A LINE L1 -183 5987 5744 504 0 0 0 chr5_random 3673354 3673410 -105073 + (TTTC)n Simple_repeat Simple_repeat 2 57 0 2028 118 14 4 chr5_random 3673413 3673693 -104790 - AluSq SINE Alu -30 283 1 962 259 97 29 chr5_random 3673693 3673878 -104605 - L1ME3A LINE L1 -427 5743 5505 2251 89 3 18 chr5_random 3673880 3674217 -104266 - MER41A LTR ERV1 0 554 223 365 340 11 15 chr5_random 3674452 3674717 -103766 - L1MEc LINE L1 -4528 1856 1593 240 324 59 11 chr5_random 3674733 3675020 -103463 - L1M3d LINE L1 -4554 1337 1037 16735 52 3 4 chr5_random 3676546 3680137 -98346 - L1PA4 LINE L1 -6 6149 2558 1091 104 3 7 chr5_random 3680145 3695553 -82930 + BSR/Beta Satellite Satellite 1 15344 -3 265 207 0 17 chr5_random 3695537 3695595 -82888 + AluJ/FRAM SINE Alu 232 288 -14 * 459 168 0 0 chr5_random 3695597 3695692 -82791 + (GAGTG)n Simple_repeat Simple_repeat 5 99 0 375 156 31 0 chr5_random 3695703 3695767 -82716 + AluS SINE Alu 224 289 -12 759 183 0 0 chr5_random 3695773 3695953 -82530 + (GAATG)n Simple_repeat Simple_repeat 1 180 0 363 221 0 0 chr5_random 3695965 3696033 -82450 + AluS SINE Alu 225 292 -10 840 199 0 0 chr5_random 3696033 3696380 -82103 + (GAATG)n Satellite Satellite 1 347 0 341 206 29 0 chr5_random 3696422 3696490 -81993 + AluJ/FRAM SINE Alu 225 294 -8 711 127 0 0 chr5_random 3696490 3696608 -81875 + (GAATG)n Simple_repeat Simple_repeat 5 122 0 333 182 0 0 chr5_random 3696619 3696674 -81809 + AluJ/FRAM SINE Alu 225 279 -23 414 167 0 0 chr5_random 3696679 3696763 -81720 + (GAATG)n Simple_repeat Simple_repeat 2 85 0 1170 100 0 0 chr5_random 3696769 3696949 -81534 + (GAGTG)n Simple_repeat Simple_repeat 1 180 0 306 87 0 0 chr5_random 3696949 3696995 -81488 + (GAATG)n Simple_repeat Simple_repeat 5 50 0 546 151 0 0 chr5_random 3697033 3697139 -81344 + (GAATG)n Simple_repeat Simple_repeat 5 110 0 369 191 29 0 chr5_random 3697150 3697218 -81265 + AluJ/FRAM SINE Alu 225 294 -8 852 164 0 0 chr5_random 3697225 3697402 -81081 + (GAGTG)n Simple_repeat Simple_repeat 4 180 0 300 250 29 0 chr5_random 3697432 3697500 -80983 + AluJ/FRAM SINE Alu 225 294 -8 198 118 0 0 chr5_random 3697500 3697534 -80949 + (GAATG)n Simple_repeat Simple_repeat 4 37 0 * 837 172 0 0 chr5_random 3697527 3697707 -80776 + (GAGTG)n Simple_repeat Simple_repeat 1 180 0 232 185 0 25 chr5_random 3697731 3697812 -80671 + (GAATG)n Simple_repeat Simple_repeat 3 81 0 286 200 0 0 chr5_random 3697826 3697881 -80602 + AluJ/FRAM SINE Alu 225 279 -23 873 163 0 0 chr5_random 3697893 3698071 -80412 + (GAATG)n Simple_repeat Simple_repeat 1 178 0 349 191 29 0 chr5_random 3698083 3698151 -80332 + AluS SINE Alu 225 294 -8 624 127 0 0 chr5_random 3698152 3698262 -80221 + (GAATG)n Simple_repeat Simple_repeat 2 111 0 348 187 69 8 chr5_random 3698262 3698354 -80129 + AluSc SINE Alu 223 283 -16 1137 105 0 0 chr5_random 3698354 3698584 -79899 + (GAATG)n Satellite Satellite 1 230 0 1056 133 0 0 chr5_random 3698599 3698779 -79704 + (GAATG)n Satellite Satellite 1 180 0 266 264 14 0 chr5_random 3698796 3698868 -79615 + AluJ/FRAM SINE Alu 225 297 -5 255 140 0 0 chr5_random 3698874 3698924 -79559 + (GAGTG)n Simple_repeat Simple_repeat 2 51 0 332 216 52 4 chr5_random 3698924 3699027 -79456 + AluJ/FRAM SINE Alu 225 286 -16 867 133 0 0 chr5_random 3699027 3699178 -79305 + (GAATG)n Simple_repeat Simple_repeat 5 155 0 373 206 27 0 chr5_random 3699189 3699262 -79221 + AluS SINE Alu 224 298 -3 222 94 0 0 chr5_random 3699262 3699294 -79189 + (GAATG)n Simple_repeat Simple_repeat 1 32 0 861 172 0 0 chr5_random 3699294 3699474 -79009 + (GAGTG)n Simple_repeat Simple_repeat 1 180 0 500 159 18 0 chr5_random 3699453 3699566 -78917 + (GAATG)n Simple_repeat Simple_repeat 2 116 0 * 301 218 0 0 chr5_random 3699566 3699621 -78862 + AluJ/FRAM SINE Alu 225 279 -23 1092 124 0 0 chr5_random 3699630 3699648 -78835 + (GAGTG)n Simple_repeat Simple_repeat 1 196 0 1092 124 0 0 chr5_random 3699648 3699826 -78657 + (GAGTG)n Simple_repeat Simple_repeat 1 178 0 321 200 0 0 chr5_random 3699973 3700028 -78455 + AluJ/FRAM SINE Alu 225 279 -23 1143 102 0 0 chr5_random 3700033 3700138 -78345 + (GAGTG)n Simple_repeat Simple_repeat 1 282 0 1143 102 0 0 chr5_random 3700138 3700315 -78168 + (GAGTG)n Simple_repeat Simple_repeat 4 180 0 259 250 16 0 chr5_random 3700370 3700434 -78049 + AluS SINE Alu 225 289 -13 713 128 15 0 chr5_random 3700434 3700567 -77916 + (GAATG)n Simple_repeat Simple_repeat 2 136 0 433 125 31 0 chr5_random 3700567 3700631 -77852 + AluJ/FRAM SINE Alu 225 290 -22 957 92 0 0 chr5_random 3700631 3700773 -77710 + (GAATG)n Simple_repeat Simple_repeat 5 146 0 351 206 29 0 chr5_random 3700784 3700852 -77631 + AluS SINE Alu 225 294 -8 957 150 0 0 chr5_random 3700854 3700894 -77589 + (GAGTG)n Simple_repeat Simple_repeat 1 220 0 957 150 0 0 chr5_random 3700894 3701074 -77409 + (GAGTG)n Simple_repeat Simple_repeat 1 180 0 302 100 0 0 chr5_random 3701242 3701282 -77201 + Alu SINE Alu 224 263 -37 801 165 0 0 chr5_random 3701308 3701472 -77011 + (GAATG)n Simple_repeat Simple_repeat 5 168 0 359 191 29 0 chr5_random 3701483 3701551 -76932 + AluS SINE Alu 225 294 -8 804 124 0 0 chr5_random 3701552 3701689 -76794 + (GAATG)n Simple_repeat Simple_repeat 5 141 0 228 226 48 0 chr5_random 3701700 3701762 -76721 + AluJ/FRAM SINE Alu 225 289 -13 419 180 9 0 chr5_random 3701762 3701873 -76610 + (GAATG)n Simple_repeat Simple_repeat 5 116 0 406 169 31 0 chr5_random 3701883 3701948 -76535 + AluJ/FRAM SINE Alu 224 290 -22 825 172 0 0 chr5_random 3701949 3702129 -76354 + (GAATG)n Simple_repeat Simple_repeat 1 180 0 343 230 27 0 chr5_random 3702141 3702215 -76268 + AluS SINE Alu 225 300 -2 960 141 0 0 chr5_random 3702222 3702399 -76084 + (GAGTG)n Simple_repeat Simple_repeat 3 179 0 393 191 0 0 chr5_random 3702400 3702505 -75978 + (GAATG)n Simple_repeat Simple_repeat 2 106 0 355 223 29 6 chr5_random 3702505 3702606 -75877 + AluJ/FRAM SINE Alu 225 292 -10 327 150 0 0 chr5_random 3702606 3702666 -75817 + (GAGTG)n Simple_repeat Simple_repeat 3 62 0 1020 133 0 0 chr5_random 3702668 3702848 -75635 + (GAATG)n Simple_repeat Simple_repeat 1 180 0 834 180 0 0 chr5_random 3702850 3703028 -75455 + (GAGTG)n Simple_repeat Simple_repeat 1 178 0 292 221 15 0 chr5_random 3703040 3703108 -75375 + AluS SINE Alu 224 292 -9 777 194 0 0 chr5_random 3703135 3703315 -75168 + (GAGTG)n Simple_repeat Simple_repeat 1 180 0 1098 124 0 9 chr5_random 3703329 3704047 -74436 + (GAATG)n Satellite Satellite 1 887 0 1098 90 0 0 chr5_random 3704047 3704225 -74258 + (GAATG)n Satellite Satellite 2 179 0 1044 125 0 0 chr5_random 3704396 3704761 -73722 + (GAATG)n Satellite Satellite 1 365 0 1029 148 0 3 chr5_random 3704772 3705838 -72645 + (GAATG)n Satellite Satellite 1 1240 0 736 130 6 6 chr5_random 3705853 3706015 -72468 + (GAATG)n Satellite Satellite 4 165 0 882 135 0 0 chr5_random 3706033 3706211 -72272 + (GAATG)n Satellite Satellite 2 179 0 713 146 0 27 chr5_random 3706247 3706432 -72051 + (GAATG)n Satellite Satellite 1 180 0 936 148 0 0 chr5_random 3706447 3706931 -71552 + (GAATG)n Satellite Satellite 1 484 0 3036 90 0 0 chr5_random 3706963 3707433 -71050 - L1P3 LINE L1 -503 5651 5182 * 7236 106 19 1 chr5_random 3707418 3708470 -70013 + L1P3 LINE L1 4103 5173 -973 22 0 0 0 chr5_random 3708644 3708666 -69817 + AT_rich Low_complexity Low_complexity 1 22 0 204 135 0 0 chr5_random 3709355 3709392 -69091 + (TG)n Simple_repeat Simple_repeat 2 38 0 287 119 0 17 chr5_random 3710564 3710623 -67860 + (TA)n Simple_repeat Simple_repeat 2 59 0 355 188 153 0 chr5_random 3712294 3712379 -66104 - MER5A DNA MER1_type -83 106 9 295 233 151 0 chr5_random 3714174 3714260 -64223 - MER5A DNA MER1_type -82 107 9 1605 142 8 0 chr5_random 3715391 3715630 -62853 - AluSx SINE Alu -71 241 1 462 263 0 80 chr5_random 3715647 3715784 -62699 - FLAM_A SINE Alu -4 129 4 369 383 18 18 chr5_random 3715933 3716160 -62323 - MIR SINE MIR 0 262 36 259 299 72 10 chr5_random 3716784 3716881 -61602 - L3 LINE CR1 -8 1569 1467 25 0 0 0 chr5_random 3717971 3717996 -60487 + AT_rich Low_complexity Low_complexity 1 25 0 21 0 0 0 chr5_random 3718874 3718895 -59588 + AT_rich Low_complexity Low_complexity 1 21 0 497 325 0 0 chr5_random 3719295 3719412 -59071 + FLAM_A SINE Alu 2 118 -15 206 350 0 17 chr5_random 3721076 3721136 -57347 - MIR SINE MIR -184 78 20 2075 141 0 10 chr5_random 3721330 3721642 -56841 - AluSx SINE Alu -3 309 1 661 228 0 24 chr5_random 3721661 3721784 -56699 - FLAM_A SINE Alu -10 123 4 433 353 21 25 chr5_random 3721936 3722171 -56312 - MIR SINE MIR 0 262 29 240 299 72 10 chr5_random 3722793 3722890 -55593 - L3 LINE CR1 -8 1569 1467 230 392 125 0 chr5_random 3722887 3723007 -55476 - MIR3 SINE MIR -72 136 2 * 567 299 0 0 chr5_random 3724673 3724790 -53693 + FLAM_A SINE Alu 2 118 -15 240 59 0 0 chr5_random 3725693 3725727 -52756 + (TC)n Simple_repeat Simple_repeat 2 35 0 201 350 0 17 chr5_random 3726552 3726612 -51871 - MIR SINE MIR -184 78 20 1962 137 3 22 chr5_random 3726799 3727113 -51370 - AluSg SINE Alu 0 310 3 492 266 83 0 chr5_random 3727839 3728031 -50452 + L1MA4 LINE L1 6089 6296 -4 209 108 46 15 chr5_random 3728298 3728363 -50120 + (TAAA)n Simple_repeat Simple_repeat 2 68 0 2191 102 3 3 chr5_random 3728382 3728675 -49808 - AluY SINE Alu -18 293 1 23 33 0 0 chr5_random 3730829 3730859 -47624 + AT_rich Low_complexity Low_complexity 1 30 0 216 92 0 77 chr5_random 3730859 3730924 -47559 + (TTAAA)n Simple_repeat Simple_repeat 4 63 0 49 32 0 0 chr5_random 3730930 3730993 -47490 + AT_rich Low_complexity Low_complexity 1 63 0 2128 107 0 0 chr5_random 3731560 3731849 -46634 + AluY SINE Alu 3 291 -20 2141 78 0 3 chr5_random 3732136 3732442 -46041 - AluY SINE Alu 0 305 1 25 31 0 0 chr5_random 3734645 3734677 -43806 + AT_rich Low_complexity Low_complexity 1 32 0 439 72 14 0 chr5_random 3735500 3735569 -42914 - L1PA4 LINE L1 0 6155 6086 224 220 0 0 chr5_random 3736877 3736927 -41556 + (TG)n Simple_repeat Simple_repeat 1 50 0 6434 84 52 5 chr5_random 3737097 3738058 -40425 - L1PA7 LINE L1 -2 6152 5182 6455 106 17 8 chr5_random 3738059 3739097 -39386 + L1PA7 LINE L1 4123 5170 -976 243 61 0 0 chr5_random 3739972 3740005 -38478 + (TG)n Simple_repeat Simple_repeat 2 34 0 302 212 153 0 chr5_random 3742851 3742936 -35547 - MER5A DNA MER1_type -83 106 9 7620 22 6 0 chr5_random 3744597 3746107 -32376 + L1PA2 LINE L1 4640 6155 0 21 0 0 0 chr5_random 3746158 3746179 -32304 + AT_rich Low_complexity Low_complexity 1 21 0 370 167 167 0 chr5_random 3746319 3746391 -32092 - MER5A DNA MER1_type -82 107 24 1319 239 72 37 chr5_random 3747281 3747911 -30572 - L1MEc LINE L1 -3654 2561 1953 24 0 0 0 chr5_random 3748174 3748198 -30285 + AT_rich Low_complexity Low_complexity 1 24 0 1048 297 51 50 chr5_random 3748274 3748877 -29606 - L1MEc LINE L1 -5753 643 40 227 384 70 57 chr5_random 3748898 3749229 -29254 + L2 LINE L2 2938 3272 0 333 259 123 44 chr5_random 3749723 3750016 -28467 - L1ME4a LINE L1 -283 5838 5523 1956 149 7 3 chr5_random 3750059 3750354 -28129 + AluSg SINE Alu 1 296 -14 3342 64 13 0 chr5_random 3751107 3751562 -26921 - MER4E LTR ERV1 -5 761 301 318 172 0 54 chr5_random 3751669 3751762 -26721 + AluSg/x SINE Alu 195 282 -20 2081 129 3 0 chr5_random 3752243 3752538 -25945 + AluSq SINE Alu 1 296 -17 1899 162 0 13 chr5_random 3752862 3753176 -25307 + AluJb SINE Alu 3 312 0 1847 133 72 4 chr5_random 3753274 3753553 -24930 + AluSx SINE Alu 1 298 -14 21 57 0 0 chr5_random 3753633 3753668 -24815 + AT_rich Low_complexity Low_complexity 1 35 0 782 248 99 11 chr5_random 3754909 3755191 -23292 + L2 LINE L2 2844 3150 -163 1613 214 0 3 chr5_random 3755652 3755951 -22532 - AluJb SINE Alu -14 298 1 6558 178 91 12 chr5_random 3756587 3757467 -21016 + L1MA3 LINE L1 3418 4227 -2078 2331 88 0 7 chr5_random 3757467 3757763 -20720 - AluY SINE Alu -16 295 2 6558 178 91 12 chr5_random 3757763 3759206 -19277 + L1MA3 LINE L1 4227 5937 -368 248 287 0 32 chr5_random 3759908 3760002 -18481 - MLT1K LTR MaLR -28 560 470 381 137 32 24 chr5_random 3760026 3760150 -18333 + (TAGA)n Simple_repeat Simple_repeat 1 125 0 868 91 25 36 chr5_random 3760169 3760530 -17953 + (TAGA)n Simple_repeat Simple_repeat 1 358 0 677 301 68 31 chr5_random 3760577 3760929 -17554 - MLT1J LTR MaLR -45 466 102 1813 181 0 3 chr5_random 3761691 3761989 -16494 + AluJb SINE Alu 1 297 -15 199 93 0 56 chr5_random 3761999 3762053 -16430 + (CAAAAA)n Simple_repeat Simple_repeat 6 56 0 598 331 158 32 chr5_random 3762271 3762829 -15654 + L2 LINE L2 2080 2707 -607 1372 167 114 22 chr5_random 3762926 3763085 -15398 + MLT1A2 LTR MaLR 21 164 -210 231 36 0 0 chr5_random 3763085 3763113 -15370 + (TC)n Simple_repeat Simple_repeat 2 29 0 1372 167 114 22 chr5_random 3763113 3763277 -15206 + MLT1A2 LTR MaLR 164 374 0 1427 237 24 53 chr5_random 3763618 3764111 -14372 - MLT1D LTR MaLR -6 499 21 274 149 43 0 chr5_random 3764142 3764189 -14294 - MLT1D LTR MaLR -455 50 2 272 167 42 0 chr5_random 3764239 3764287 -14196 - MLT1J LTR MaLR -455 50 1 346 62 42 0 chr5_random 3764288 3764336 -14147 - MLT1D LTR MaLR -455 50 1 325 64 43 0 chr5_random 3764337 3764384 -14099 - MLT1D LTR MaLR -455 50 2 308 104 42 0 chr5_random 3764386 3764434 -14049 - MLT1D LTR MaLR -455 50 1 315 83 42 0 chr5_random 3764435 3764483 -14000 - MLT1D LTR MaLR -455 50 1 302 104 42 0 chr5_random 3764484 3764532 -13951 - MLT1D LTR MaLR -455 50 1 275 133 44 0 chr5_random 3764533 3764578 -13905 - MLT1D LTR MaLR -456 49 3 300 125 42 0 chr5_random 3764581 3764629 -13854 - MLT1D LTR MaLR -455 50 1 302 125 42 0 chr5_random 3764630 3764678 -13805 - MLT1D LTR MaLR -455 50 1 343 64 43 0 chr5_random 3764727 3764774 -13709 - MLT1D LTR MaLR -456 49 1 287 128 43 0 chr5_random 3764775 3764822 -13661 - MLT1D LTR MaLR -456 49 1 337 83 42 0 chr5_random 3764823 3764871 -13612 - MLT1D LTR MaLR -455 50 1 322 104 42 0 chr5_random 3764872 3764920 -13563 - MLT1D LTR MaLR -455 50 1 239 137 39 59 chr5_random 3764921 3764972 -13511 - MLT1D LTR MaLR -455 50 1 326 85 43 0 chr5_random 3764973 3765020 -13463 - MLT1D LTR MaLR -455 50 2 552 55 0 0 chr5_random 3765416 3765489 -12994 + L1PA3 LINE L1 6080 6152 -3 2323 128 0 0 chr5_random 3765641 3766024 -12459 - L1PA8 LINE L1 -80 6092 5710 1230 68 0 0 chr5_random 3766228 3766374 -12109 + AluSg SINE Alu 1 146 -164 372 36 55 0 chr5_random 3766376 3766431 -12052 - L1PA7 LINE L1 -329 5825 5768 963 125 6 12 chr5_random 3766431 3766591 -11892 + L1PA13 LINE L1 5993 6151 -12 199 49 49 24 chr5_random 3766594 3766635 -11848 + (TTTG)n Simple_repeat Simple_repeat 3 44 0 1026 74 74 0 chr5_random 3766635 3766770 -11713 + AluSg/x SINE Alu 159 303 -9 1912 150 0 0 chr5_random 3767038 3767324 -11159 - AluSx SINE Alu -19 293 8 2048 141 0 16 chr5_random 3767356 3767668 -10815 - AluSx SINE Alu -5 307 1 896 138 50 0 chr5_random 3767669 3767828 -10655 - L1PA13 LINE L1 -229 5934 5768 921 138 6 12 chr5_random 3767828 3767988 -10495 + L1PA13 LINE L1 5993 6151 -12 378 190 0 0 chr5_random 3768081 3768197 -10286 + C-rich Low_complexity Low_complexity 1 116 0 3312 149 30 14 chr5_random 3768308 3768932 -9551 + Tigger1 DNA MER2_type 1785 2418 0 1824 124 11 8 chr5_random 3769533 3769799 -8684 + AluSq SINE Alu 1 267 -46 2055 147 0 3 chr5_random 3769880 3770180 -8303 + AluSx SINE Alu 1 299 -13 745 152 37 104 chr5_random 3770190 3770354 -8129 + FRAM SINE Alu 1 152 -24 1488 200 7 46 chr5_random 3770437 3770574 -7909 + AluJo SINE Alu 1 142 -170 2019 129 6 29 chr5_random 3770574 3770885 -7598 + AluSx SINE Alu 1 304 -8 2066 147 0 0 chr5_random 3770888 3771201 -7282 + AluSq SINE Alu 1 313 0 1488 200 7 46 chr5_random 3771201 3771364 -7119 + AluJo SINE Alu 144 293 -19 274 254 51 0 chr5_random 3771791 3771850 -6633 - L2 LINE L2 0 3313 3252 1023 159 17 100 chr5_random 3771893 3772132 -6351 + MER20 DNA MER1_type 1 219 0 456 314 55 30 chr5_random 3773280 3773608 -4875 + L1ME LINE L1 5483 5818 -303 231 36 0 0 chr5_random 3773759 3773787 -4696 + (TG)n Simple_repeat Simple_repeat 1 28 0 682 230 127 24 chr5_random 3774271 3774484 -3999 + MIR SINE MIR 17 251 -11 216 167 0 0 chr5_random 3774666 3774714 -3769 + (TG)n Simple_repeat Simple_repeat 2 49 0 1847 216 103 44 chr5_random 3775212 3775966 -2517 + L1MC5 LINE L1 6962 7760 -201 2143 111 7 0 chr5_random 3775967 3776256 -2227 + AluSx SINE Alu 1 291 -21 448 194 185 104 chr5_random 3776276 3776487 -1996 + MIR SINE MIR 19 246 -16 244 172 31 78 chr5_random 3776488 3776552 -1931 - MIR SINE MIR -56 152 92 657 184 141 44 chr5_random 3776592 3776798 -1685 + MLT1J2 LTR MaLR 2 227 -223 334 262 172 33 chr5_random 3776926 3777048 -1435 - MIR SINE MIR -106 156 18 183 171 86 100 chr5_random 3777029 3777099 -1384 - MIR SINE MIR -146 116 48 * 37 0 0 0 chr5_random 3777343 3777380 -1103 + AT_rich Low_complexity Low_complexity 1 37 0 2501 61 3 3 chr5_random 3777618 3777929 -554 - AluY SINE Alu 0 311 1