3248 198 62 16 chr4 0 958 -184287704 + L1 LINE L1 2957 3998 -2148 2292 84 7 10 chr4 958 1257 -184287405 + AluSq SINE Alu 1 298 -15 3248 198 62 16 chr4 1257 1343 -184287319 + L1 LINE L1 3998 4079 -2067 464 286 7 0 chr4 1852 1992 -184286670 + L1MC5 LINE L1 6650 6790 -1171 587 280 54 16 chr4 2027 2389 -184286273 + L1MC5 LINE L1 7494 7913 -48 258 310 54 29 chr4 2436 2675 -184285987 - L1M4 LINE L1 -1161 4985 4741 732 266 24 34 chr4 3203 3410 -184285252 + L1M4b LINE L1 17 221 -6638 299 116 0 0 chr4 3510 3553 -184285109 + AluSc SINE Alu 247 289 -10 459 262 128 0 chr4 3570 3742 -184284920 - MER33 DNA MER1_type -129 195 2 707 206 14 27 chr4 3947 4093 -184284569 - MER61D LTR ERV1 -20 481 338 2071 123 0 0 chr4 4560 4870 -184283792 - AluSc SINE Alu 0 312 3 3644 127 37 0 chr4 5128 5705 -184282957 - MER51C LTR ERV1 0 640 1 2267 78 0 4 chr4 5950 6231 -184282431 - AluSc SINE Alu -17 292 13 336 227 40 0 chr4 6232 6307 -184282355 + MER5B DNA MER1_type 85 162 -16 435 127 0 0 chr4 6765 6828 -184281834 + AluS SINE Alu 2 64 -249 8786 63 2 3 chr4 6842 7914 -184280748 - MER11C LTR ERVK 0 1071 1 1566 111 0 0 chr4 7914 8121 -184280541 + AluSc SINE Alu 88 294 -15 280 250 0 50 chr4 8177 8277 -184280385 - L1ME3A LINE L1 -8 6162 6068 1453 224 0 14 chr4 8423 8717 -184279945 - AluJb SINE Alu -22 290 1 2156 104 7 20 chr4 8721 9020 -184279642 - AluY SINE Alu -16 295 1 421 178 14 0 chr4 9078 9151 -184279511 - AluJo SINE Alu -168 134 61 568 229 93 19 chr4 9269 9328 -184279334 - L1M3c LINE L1 -4674 1291 1238 2247 106 7 0 chr4 9328 9629 -184279033 - AluSx SINE Alu -9 303 1 568 229 93 19 chr4 9629 9893 -184278769 - L1M3c LINE L1 -4727 1238 945 25330 88 8 10 chr4 9898 11932 -184276730 - L1PA7 LINE L1 0 6154 4117 2347 105 0 0 chr4 11932 12227 -184276435 - AluSx SINE Alu -17 295 1 25330 88 8 10 chr4 12227 13977 -184274685 - L1PA7 LINE L1 -2037 4117 2380 2374 78 0 7 chr4 13977 14270 -184274392 - AluY SINE Alu -20 291 1 25330 88 8 10 chr4 14270 14938 -184273724 - L1PA7 LINE L1 -3774 2380 1712 1779 276 42 47 chr4 14931 14959 -184273703 - L1M3c LINE L1 -4984 971 944 * 2167 116 3 0 chr4 14959 15253 -184273409 - AluSx SINE Alu -17 295 1 1779 276 42 47 chr4 15253 15974 -184272688 - L1M3c LINE L1 -5011 944 344 424 320 37 0 chr4 15952 16157 -184272505 - L1M3a LINE L1 -5219 736 550 * 509 325 68 24 chr4 16159 16411 -184272251 - L1M3a LINE L1 -5501 454 192 284 136 27 55 chr4 16531 16641 -184272021 + MER4-int LTR ERV1 567 673 -5925 409 137 14 27 chr4 16985 17058 -184271604 + MER4-int LTR ERV1 739 810 -5788 263 95 0 0 chr4 17086 17128 -184271534 + MER4-int LTR ERV1 685 726 -5872 232 178 0 44 chr4 17161 17206 -184271456 + LTR49 LTR ERV1 271 313 -282 640 103 31 0 chr4 17226 17323 -184271339 + MER4-int LTR ERV1 993 1092 -5506 2235 100 0 10 chr4 17324 17623 -184271039 + AluSc SINE Alu 1 296 -13 6510 97 152 147 chr4 17766 18044 -184270618 + MER4-int LTR ERV1 532 807 -5791 2364 62 31 0 chr4 18044 18332 -184270330 + AluY SINE Alu 1 297 -14 6510 97 152 147 chr4 18332 18740 -184269922 + MER4-int LTR ERV1 807 1211 -5387 2395 73 0 17 chr4 18740 19042 -184269620 + AluY SINE Alu 1 297 -14 6510 97 152 147 chr4 19042 19524 -184269138 + MER4-int LTR ERV1 1211 1689 -4909 2001 154 0 20 chr4 19524 19829 -184268833 - AluSx SINE Alu -13 299 1 6510 97 152 147 chr4 19829 20848 -184267814 + MER4-int LTR ERV1 1689 3533 -3065 1385 86 34 75 chr4 20903 21033 -184267629 + MER4-int LTR ERV1 3837 3952 -2646 2406 78 0 28 chr4 21033 21353 -184267309 - AluY SINE Alu 0 311 1 1385 86 34 75 chr4 21353 21489 -184267173 + MER4-int LTR ERV1 3952 4092 -2506 1965 118 30 0 chr4 21789 22080 -184266582 - AluSg SINE Alu 0 299 1 1163 117 0 0 chr4 22255 22418 -184266244 - AluSg/x SINE Alu -13 297 135 333 210 50 0 chr4 22627 22727 -184265935 - Charlie5 DNA MER1_type -41 2571 2467 1574 77 39 0 chr4 22728 22935 -184265727 - AluY SINE Alu 0 311 97 239 139 0 23 chr4 23235 23278 -184265384 + L1MB8 LINE L1 841 882 -5660 22 56 0 0 chr4 23532 23568 -184265094 + AT_rich Low_complexity Low_complexity 1 36 0 369 0 0 0 chr4 23644 23685 -184264977 + (TG)n Simple_repeat Simple_repeat 2 42 0 316 290 59 32 chr4 23714 23900 -184264762 - L1MC4a LINE L1 -1878 5930 5740 186 295 92 46 chr4 23909 24126 -184264536 - L2 LINE L2 -228 3044 2818 195 322 0 0 chr4 24276 24335 -184264327 - L2 LINE L2 -694 2620 2562 235 297 77 13 chr4 24419 24574 -184264088 - L1MC4a LINE L1 -2328 5480 5316 552 237 87 27 chr4 25580 25799 -184262863 + L2 LINE L2 3077 3308 -5 265 313 20 30 chr4 26502 26601 -184262061 + MIR3 SINE MIR 83 180 -28 2443 66 0 3 chr4 28507 28809 -184259853 + AluSc SINE Alu 1 301 -8 1062 238 155 32 chr4 28983 29626 -184259036 + L1MB8 LINE L1 1386 2384 -4441 1599 198 44 68 chr4 29660 29826 -184258836 + L1MB8 LINE L1 6159 6327 -349 2410 91 3 7 chr4 29826 30135 -184258527 - AluSp SINE Alu -5 308 1 1599 198 44 68 chr4 30135 30422 -184258240 + L1MB8 LINE L1 6327 6601 -75 3534 125 0 4 chr4 30592 31104 -184257558 + MER9 LTR ERVK 1 510 -1 287 308 56 0 chr4 32556 32663 -184255999 + MIR SINE MIR 31 143 -119 353 252 220 13 chr4 32759 33072 -184255590 + L2 LINE L2 2871 3248 -65 224 147 26 58 chr4 33099 33292 -184255370 + (CAGAGA)n Simple_repeat Simple_repeat 1 186 0 228 179 13 51 chr4 33204 33282 -184255380 + (CAGAA)n Simple_repeat Simple_repeat 5 79 0 667 230 0 14 chr4 33908 34047 -184254615 + AluJo SINE Alu 2 138 -174 1303 148 0 48 chr4 35497 35726 -184252936 - AluJo SINE Alu -13 299 82 555 282 12 0 chr4 36557 36727 -184251935 + L1MB2 LINE L1 16 187 -6355 2183 113 7 3 chr4 37452 37765 -184250897 + AluSx SINE Alu 1 314 0 1706 182 0 7 chr4 37826 38123 -184250539 - AluJb SINE Alu -17 295 1 917 251 118 30 chr4 38142 38505 -184250157 - MER21B LTR ERV1 -69 794 400 300 274 32 21 chr4 38519 38614 -184250048 + MER92B LTR ERV1 33 128 -508 803 214 92 74 chr4 38648 38819 -184249843 + MER92B LTR ERV1 294 460 -176 2288 87 0 3 chr4 38819 39108 -184249554 - AluSc SINE Alu -21 288 1 803 214 92 74 chr4 39108 39273 -184249389 + MER92B LTR ERV1 460 636 0 539 110 37 0 chr4 39767 39849 -184248813 - AluSc SINE Alu -224 85 1 2187 106 3 6 chr4 39905 40216 -184248446 + AluY SINE Alu 2 311 0 508 255 98 76 chr4 40221 41114 -184247548 + L1MB2 LINE L1 2416 3331 -3313 1408 99 0 35 chr4 41121 41322 -184247340 + AluYa5 SINE Alu 103 296 -15 442 293 68 8 chr4 41358 41624 -184247038 + L1MA8 LINE L1 4527 4808 -1338 750 287 126 2 chr4 41658 42072 -184246590 + L1MB2 LINE L1 5675 6139 -32 1786 185 65 120 chr4 42202 43328 -184245334 + L1MA8 LINE L1 4884 5937 -354 226 284 0 25 chr4 43331 43412 -184245250 + L1MB2 LINE L1 5544 5622 -1022 2391 80 0 3 chr4 43519 43821 -184244841 + AluY SINE Alu 1 301 -10 360 0 0 0 chr4 43821 43861 -184244801 + (TA)n Simple_repeat Simple_repeat 2 41 0 404 246 103 17 chr4 43861 44036 -184244626 + L1MB2 LINE L1 6147 6336 -345 3870 98 72 3 chr4 44039 44610 -184244052 + LTR66 LTR ERVL 1 610 0 13495 98 7 1 chr4 44610 46396 -184242266 + HERVL66 LTR ERVL 1 1797 -2532 313 71 54 71 chr4 46376 46432 -184242230 + HERVL66 LTR ERVL 2654 2708 -1621 * 5097 74 5 12 chr4 46423 47561 -184241101 + HERVL66 LTR ERVL 3064 4329 0 4018 83 88 4 chr4 47561 48117 -184240545 + LTR66 LTR ERVL 1 603 -7 2135 96 4 7 chr4 48162 48434 -184240228 + AluSc SINE Alu 13 283 -26 490 309 75 10 chr4 48458 48753 -184239909 + L1MB2 LINE L1 6352 6665 -4 1013 86 0 0 chr4 49004 49132 -184239530 + AluSg/x SINE Alu 168 295 -15 1857 168 28 39 chr4 49132 49320 -184239342 - MSTA LTR MaLR -66 362 178 2354 83 0 32 chr4 49320 49632 -184239030 + AluY SINE Alu 1 302 -9 1857 168 28 39 chr4 49632 49807 -184238855 - MSTA LTR MaLR -250 178 3 808 270 41 4 chr4 49808 50078 -184238584 + L1MB1 LINE L1 5712 5991 -177 269 287 40 30 chr4 50076 50177 -184238485 + L1MA6 LINE L1 125 226 -5729 * 881 293 115 45 chr4 50181 50799 -184237863 + L1MA6 LINE L1 189 849 -5106 1177 231 49 81 chr4 50825 51088 -184237574 + L1MA6 LINE L1 3963 4233 -1801 658 227 0 0 chr4 51088 51216 -184237446 - FLAM_C SINE Alu -4 129 2 1177 231 49 81 chr4 51216 51544 -184237118 + L1MA6 LINE L1 4233 4535 -1499 330 213 13 0 chr4 51741 51816 -184236846 + L1MA6 LINE L1 5754 5829 -359 2138 80 20 40 chr4 51966 52265 -184236397 + AluY SINE Alu 4 296 -15 1018 295 74 15 chr4 52265 52740 -184235922 + L1MB2 LINE L1 5665 6167 -4 26 0 0 0 chr4 52984 53010 -184235652 + AT_rich Low_complexity Low_complexity 1 26 0 2156 107 6 22 chr4 53103 53420 -184235242 + AluSp SINE Alu 1 312 -1 269 174 22 0 chr4 53772 53818 -184234844 + L1M4c LINE L1 1 47 -5908 467 189 32 0 chr4 53850 53945 -184234717 - L1PBa LINE L1 -6463 400 303 24 32 0 0 chr4 56309 56340 -184232322 + AT_rich Low_complexity Low_complexity 1 31 0 2216 113 3 0 chr4 56884 57176 -184231486 + AluSq SINE Alu 1 293 -20 744 327 86 22 chr4 57179 57540 -184231122 + L1M4c LINE L1 71 454 -5501 2175 283 73 38 chr4 57552 59459 -184229203 + L1M4c LINE L1 344 1794 -4241 2224 99 7 0 chr4 59467 59760 -184228902 + AluY SINE Alu 1 295 -16 404 173 0 62 chr4 59832 59913 -184228749 + AluJo SINE Alu 61 136 -176 1726 186 0 14 chr4 59950 60235 -184228427 + AluJb SINE Alu 1 281 -31 1921 244 106 37 chr4 60277 60491 -184228171 + L1M4c LINE L1 1774 1972 -4062 2205 118 7 0 chr4 60491 60795 -184227867 + AluY SINE Alu 1 306 -5 1921 244 106 37 chr4 60795 60868 -184227794 + L1M4c LINE L1 1972 2039 -3995 1083 305 58 8 chr4 60868 61245 -184227417 + MSTD LTR MaLR 1 396 0 1921 244 106 37 chr4 61245 62169 -184226493 + L1M4c LINE L1 2039 3071 -2963 296 273 7 93 chr4 62171 62216 -184226446 - MER67C LTR ERV1 -573 137 90 2207 98 3 14 chr4 62216 62513 -184226149 + AluSg SINE Alu 1 294 -16 296 273 7 93 chr4 62513 62617 -184226045 - MER67C LTR ERV1 -620 90 1 264 122 0 0 chr4 63092 63133 -184225529 + (A)n Simple_repeat Simple_repeat 1 41 0 1508 203 0 23 chr4 63194 63495 -184225167 - AluJb SINE Alu -18 294 1 2156 51 83 11 chr4 63500 63776 -184224886 - AluY SINE Alu -15 296 1 871 283 79 6 chr4 63822 64140 -184224522 - MER21B LTR ERV1 -107 756 416 1293 223 156 31 chr4 64192 64704 -184223958 + MER92B LTR ERV1 59 634 -2 312 48 0 0 chr4 65876 65918 -184222744 + (TG)n Simple_repeat Simple_repeat 1 42 0 5159 187 51 13 chr4 66436 68139 -184220523 + L1MA3 LINE L1 4085 5722 -583 2211 54 91 0 chr4 68139 68415 -184220247 - AluY SINE Alu -10 301 1 5159 187 51 13 chr4 68415 68791 -184219871 + L1MA3 LINE L1 5722 6256 -49 2115 84 42 7 chr4 68791 69078 -184219584 + AluY SINE Alu 1 297 -14 5159 187 51 13 chr4 69078 69130 -184219532 + L1MA3 LINE L1 6256 6305 0 373 288 49 10 chr4 69556 69761 -184218901 + L1MB2 LINE L1 4639 4851 -1295 1086 257 39 12 chr4 69763 70098 -184218564 + L1MB2 LINE L1 5675 6018 -153 965 59 8 0 chr4 70146 70264 -184218398 - AluY SINE Alu -43 268 150 695 137 8 8 chr4 70274 70405 -184218257 - L1PA13 LINE L1 -4 6159 6029 1116 281 37 50 chr4 70517 70621 -184218041 + L1 LINE L1 4519 4623 -1523 2130 110 7 3 chr4 70621 70911 -184217751 - AluSg SINE Alu -17 293 3 1116 281 37 50 chr4 70911 71380 -184217282 + L1 LINE L1 4623 5084 -1062 1093 109 14 0 chr4 71380 71527 -184217135 - AluSg/x SINE Alu -16 294 146 1917 89 19 19 chr4 71528 71785 -184216877 - AluY SINE Alu -54 257 1 758 314 26 74 chr4 71855 72317 -184216345 + L1M3a LINE L1 118 557 -5398 1196 192 179 26 chr4 72522 72912 -184215750 + LTR7 LTR ERV1 1 450 0 2029 194 49 25 chr4 72912 73360 -184215302 + HERVH LTR ERV1 1 459 -7254 11594 150 9 41 chr4 73418 74241 -184214421 + HERVH LTR ERV1 800 1648 -6065 2985 13 0 0 chr4 74241 74559 -184214103 - AluYb8 SINE Alu 0 318 1 11594 150 9 41 chr4 74559 75546 -184213116 + HERVH LTR ERV1 1648 2534 -5179 2459 76 0 0 chr4 75546 75837 -184212825 + AluY SINE Alu 1 291 -20 11594 150 9 41 chr4 75837 76125 -184212537 + HERVH LTR ERV1 2534 2830 -4883 4130 135 2 5 chr4 76125 76764 -184211898 + HERVH LTR ERV1 3357 3993 -3720 2998 149 15 20 chr4 76747 77298 -184211364 + HERVH LTR ERV1 3993 5286 -1805 * 4460 125 40 38 chr4 77296 78247 -184210415 + pTR5 LTR ERV1 741 2025 -413 375 235 10 0 chr4 78247 78345 -184210317 + LTR30 LTR ERV1 544 642 -80 1546 90 5 9 chr4 78348 78571 -184210091 + pTR5 LTR ERV1 172 393 -2045 * 20375 150 5 3 chr4 78570 81821 -184206841 + HERVH LTR ERV1 4458 7713 0 1207 193 185 28 chr4 81821 82210 -184206452 + LTR7 LTR ERV1 1 450 0 3166 232 59 46 chr4 82338 82571 -184206091 + L1MA10 LINE L1 4112 4340 -1840 633 248 0 0 chr4 82571 82704 -184205958 - FLAM_C SINE Alu 0 133 1 3166 232 59 46 chr4 82704 83708 -184204954 + L1MA10 LINE L1 4340 5366 -814 1923 179 137 103 chr4 83721 84125 -184204537 + L1MA10 LINE L1 5529 5918 -416 821 126 0 22 chr4 84125 84260 -184204402 - FLAM_C SINE Alu 0 133 2 1923 179 137 103 chr4 84260 84449 -184204213 + L1MA10 LINE L1 5918 6099 -235 2335 101 0 0 chr4 84449 84747 -184203915 - AluSg SINE Alu -12 298 1 1923 179 137 103 chr4 84747 84902 -184203760 + L1MA10 LINE L1 6099 6304 -30 359 243 52 62 chr4 84933 85037 -184203625 + MER6B DNA MER2_type 1 104 -761 9620 23 2 245 chr4 85037 86852 -184201810 - SVA Other Other -1 1385 13 359 243 52 62 chr4 86852 86876 -184201786 + MER6B DNA MER2_type 104 127 -738 1693 102 0 5 chr4 86876 87092 -184201570 - AluSg SINE Alu -95 215 1 359 243 52 62 chr4 87092 87172 -184201490 + MER6B DNA MER2_type 127 208 -2 1202 144 5 0 chr4 87384 87572 -184201090 - MER30B DNA MER1_type -1 189 1 3685 126 14 14 chr4 88474 89045 -184199617 - LTR10C LTR ERV1 -20 571 1 3579 58 74 0 chr4 91540 91987 -184196675 - LTR2B LTR ERV1 0 490 11 2317 123 60 13 chr4 92095 92526 -184196136 - LTR56 LTR ERV1 -5 433 9 2124 106 0 26 chr4 92847 93150 -184195512 - AluY SINE Alu -16 295 1 1392 229 50 48 chr4 93305 93952 -184194710 - MER67C LTR ERV1 -5 705 1 307 290 99 34 chr4 94718 94980 -184193682 - MER21B LTR ERV1 -169 694 416 390 266 8 16 chr4 95012 95136 -184193526 + MER93a LTR ERV1 244 366 -36 23 0 0 0 chr4 95978 96001 -184192661 + AT_rich Low_complexity Low_complexity 1 23 0 883 247 62 43 chr4 96074 96192 -184192470 - MER33 DNA MER1_type -2275 310 196 1955 132 16 3 chr4 96192 96495 -184192167 + AluSc SINE Alu 1 307 -2 883 247 62 43 chr4 96495 96680 -184191982 - MER33 DNA MER1_type -2389 196 1 723 205 49 33 chr4 96883 97088 -184191574 - MER61D LTR ERV1 -18 732 338 3512 131 38 2 chr4 97747 98322 -184190340 - MER51C LTR ERV1 0 640 3 1060 291 131 7 chr4 98506 98925 -184189737 - MLT1H LTR MaLR -72 477 7 2454 63 7 3 chr4 99575 99874 -184188788 + AluY SINE Alu 1 300 -11 592 249 51 51 chr4 99897 100114 -184188548 - MER52-int LTR ERV1 -1818 5273 5057 597 108 24 0 chr4 100116 100199 -184188463 + AluS SINE Alu 5 89 -223 2071 131 3 3 chr4 100403 100708 -184187954 - AluSc SINE Alu -4 305 1 943 149 90 11 chr4 102084 102272 -184186390 + L1MA3 LINE L1 6098 6300 -5 21 0 0 0 chr4 102528 102549 -184186113 + AT_rich Low_complexity Low_complexity 1 21 0 393 344 33 44 chr4 106012 106378 -184182284 + L1MB2 LINE L1 418 779 -5524 2038 109 0 4 chr4 106755 107030 -184181632 + AluY SINE Alu 4 277 -34 2180 107 0 3 chr4 107067 107356 -184181306 + AluSc SINE Alu 6 293 -16 43 35 0 0 chr4 107442 107499 -184181163 + AT_rich Low_complexity Low_complexity 1 57 0 764 314 64 17 chr4 107517 107560 -184181102 + L1MB2 LINE L1 1315 1355 -5029 2269 94 0 10 chr4 107560 107857 -184180805 + AluY SINE Alu 1 294 -17 764 314 64 17 chr4 107857 108329 -184180333 + L1MB2 LINE L1 1355 1854 -4530 446 257 72 86 chr4 108338 108527 -184180135 + L1MB2 LINE L1 1969 2159 -4223 2341 97 0 3 chr4 108527 108826 -184179836 + AluSc SINE Alu 1 298 -11 252 0 0 0 chr4 108826 108854 -184179808 + (TA)n Simple_repeat Simple_repeat 2 29 0 446 257 72 86 chr4 108854 109402 -184179260 + L1MB2 LINE L1 2158 2693 -3689 246 32 0 0 chr4 109402 109433 -184179229 + (TG)n Simple_repeat Simple_repeat 2 32 0 446 257 72 86 chr4 109433 109616 -184179046 + L1MB2 LINE L1 2693 2877 -3505 604 266 79 38 chr4 109620 109910 -184178752 + L1MB2 LINE L1 4785 5086 -1296 666 274 38 99 chr4 109914 110050 -184178612 + L1MB2 LINE L1 5912 6055 -352 2013 135 0 17 chr4 110050 110347 -184178315 + AluSx SINE Alu 1 292 -20 666 274 38 99 chr4 110347 110675 -184177987 + L1MB2 LINE L1 6055 6401 -6 509 101 0 79 chr4 110675 110764 -184177898 + L1PA7 LINE L1 6073 6154 0 666 274 38 99 chr4 110764 110788 -184177874 + L1MB2 LINE L1 6401 6370 -37 2090 109 39 0 chr4 110788 111072 -184177590 + AluSg SINE Alu 1 295 -15 666 274 38 99 chr4 111072 111107 -184177555 + L1MB2 LINE L1 6369 6405 -2 21 0 0 0 chr4 111409 111430 -184177232 + AT_rich Low_complexity Low_complexity 1 21 0 707 250 16 21 chr4 111430 111618 -184177044 - L1 LINE L1 -2055 4091 3905 1784 158 27 10 chr4 111624 111921 -184176741 + AluSx SINE Alu 1 302 -10 3217 227 45 17 chr4 111922 111991 -184176671 + L1MB2 LINE L1 4410 4476 -1670 1975 146 17 0 chr4 111991 112286 -184176376 + AluSg SINE Alu 2 301 -9 3217 227 45 17 chr4 112286 113113 -184175549 + L1MB2 LINE L1 4476 5331 -815 4823 180 36 2 chr4 113123 113983 -184174679 + L1P LINE L1 11 899 -5247 17536 56 10 0 chr4 113991 114820 -184173842 + L1PA5 LINE L1 3243 4062 -2092 2147 102 0 7 chr4 114820 115115 -184173547 - AluY SINE Alu -16 295 3 17536 56 10 0 chr4 115115 117204 -184171458 + L1PA5 LINE L1 4062 6153 -1 684 262 98 6 chr4 117206 117521 -184171141 + L1MB2 LINE L1 5820 6167 -4 22 0 0 0 chr4 117768 117790 -184170872 + AT_rich Low_complexity Low_complexity 1 22 0 904 328 88 24 chr4 118339 118757 -184169905 + L1M3a LINE L1 10 454 -5501 333 314 29 0 chr4 118765 118867 -184169795 + L1M3a LINE L1 640 744 -5211 2041 285 43 31 chr4 118947 119717 -184168945 + L1M3a LINE L1 344 1004 -4951 2023 111 7 0 chr4 119719 119989 -184168673 + AluSc SINE Alu 3 274 -35 227 258 269 0 chr4 120348 120441 -184168221 - MER5A DNA MER1_type -16 173 56 2253 107 0 0 chr4 120512 120812 -184167850 + AluSg SINE Alu 1 300 -10 2107 125 0 3 chr4 120842 121138 -184167524 + AluSp SINE Alu 1 295 -18 570 125 42 0 chr4 121650 121746 -184166916 + AluSg/x SINE Alu 213 312 0 2956 246 43 22 chr4 121754 122087 -184166575 + L1MB2 LINE L1 5278 5602 -569 1630 204 3 0 chr4 122087 122371 -184166291 + AluJb SINE Alu 3 287 -25 2956 246 43 22 chr4 122371 122910 -184165752 + L1MB2 LINE L1 5602 6169 -2 230 291 9 45 chr4 124166 124240 -184164422 + L1MB2 LINE L1 4882 4952 -1194 2301 78 17 10 chr4 124240 124536 -184164126 + AluSx SINE Alu 1 298 -14 230 291 9 45 chr4 124536 124571 -184164091 + L1MB2 LINE L1 4952 4987 -1159 947 232 41 50 chr4 124592 124781 -184163881 + L1MB2 LINE L1 5664 5850 -321 414 234 15 102 chr4 124781 124918 -184163744 + FLAM_C SINE Alu 1 125 -8 947 232 41 50 chr4 124918 125069 -184163593 + L1MB2 LINE L1 5850 6001 -170 342 245 103 73 chr4 125122 125355 -184163307 - TAR1 Satellite telomeric -1847 264 25 * 1244 223 36 22 chr4 125217 125671 -184162991 - LTR60 LTR ERV1 -41 545 1 2036 78 82 3 chr4 125770 126052 -184162610 + AluY SINE Alu 2 305 -6 660 313 56 47 chr4 126207 126651 -184162011 - LTR60-int LTR ERV1 -314 6891 6444 2282 76 3 0 chr4 128109 128400 -184160262 - AluY SINE Alu -19 292 1 2207 110 0 3 chr4 128404 128712 -184159950 - AluSg SINE Alu -3 307 1 249 288 40 56 chr4 129693 129818 -184158844 - MER93b LTR ERV1 -36 337 215 211 333 200 22 chr4 130011 130146 -184158516 + MER5A DNA MER1_type 31 189 0 323 237 131 81 chr4 130869 130947 -184157715 - MER6B DNA MER2_type -656 209 136 2128 109 13 3 chr4 130947 131249 -184157413 + AluSq SINE Alu 1 305 -8 323 237 131 81 chr4 131249 131368 -184157294 - MER6B DNA MER2_type -729 136 2 2292 164 104 101 chr4 131404 132156 -184156506 - L1MA9 LINE L1 -30 6170 5417 2908 216 67 89 chr4 132165 132290 -184156372 - L1MA9 LINE L1 -779 5255 5129 1792 127 80 4 chr4 132290 132566 -184156096 - AluSc SINE Alu -12 297 1 195 42 0 0 chr4 132566 132590 -184156072 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1713 140 4 4 chr4 132590 132840 -184155822 - AluSp SINE Alu -28 285 36 2908 216 67 89 chr4 132840 133126 -184155536 - L1MA9 LINE L1 -903 5131 4840 2300 73 7 3 chr4 133126 133414 -184155248 + AluY SINE Alu 2 290 -21 2908 216 67 89 chr4 133414 134072 -184154590 - L1MA9 LINE L1 -1194 4840 4216 675 241 0 0 chr4 134072 134205 -184154457 + FLAM_C SINE Alu 1 133 0 2908 216 67 89 chr4 134205 134463 -184154199 - L1MA9 LINE L1 -1818 4216 3954 934 294 64 82 chr4 134492 134857 -184153805 - L1MA9 LINE L1 -5106 849 504 2106 96 3 45 chr4 134857 135025 -184153637 - AluSg SINE Alu -10 300 149 2217 74 42 0 chr4 135025 135308 -184153354 - AluY SINE Alu -15 296 2 2106 96 3 45 chr4 135308 135452 -184153210 - AluSg SINE Alu -161 149 1 934 294 64 82 chr4 135452 135825 -184152837 - L1MA9 LINE L1 -5451 504 125 449 211 48 160 chr4 135823 136065 -184152597 - L1MB2 LINE L1 -180 5991 5790 * 2373 69 16 13 chr4 136065 136370 -184152292 - AluY SINE Alu -5 306 1 449 211 48 160 chr4 136370 136440 -184152222 - L1MB2 LINE L1 -381 5790 5714 943 195 6 6 chr4 136441 136615 -184152047 + MSTA LTR MaLR 1 174 -254 973 107 0 0 chr4 137187 137318 -184151344 + AluSg/x SINE Alu 178 308 -4 247 239 56 80 chr4 137343 137556 -184151106 - L1M1 LINE L1 -4015 2367 2160 2333 76 0 10 chr4 137573 137875 -184150787 + AluY SINE Alu 1 299 -12 2259 115 3 0 chr4 137878 138183 -184150479 + AluSp SINE Alu 1 306 -7 2102 173 78 111 chr4 138184 138330 -184150332 + L1MA9 LINE L1 5606 5755 -557 249 133 0 0 chr4 138330 138375 -184150287 + LTR66 LTR ERVL 394 438 -172 2102 173 78 111 chr4 138375 138888 -184149774 + L1MA9 LINE L1 5755 6286 -26 503 188 99 35 chr4 138919 139122 -184149540 + MER6 DNA MER2_type -65 864 -1 1295 82 54 22 chr4 139381 139464 -184149198 - MER30B DNA MER1_type 0 190 111 1903 101 4 0 chr4 139464 139712 -184148950 - AluSp SINE Alu -8 305 57 1295 82 54 22 chr4 139712 139812 -184148850 - MER30B DNA MER1_type -79 111 1 2463 82 0 0 chr4 140395 140701 -184147961 - AluSc SINE Alu -3 306 1 23 0 0 0 chr4 140883 140906 -184147756 + AT_rich Low_complexity Low_complexity 1 23 0 2566 65 0 0 chr4 141463 141771 -184146891 - AluY SINE Alu -3 308 1 211 324 14 14 chr4 142652 142723 -184145939 - MER5A DNA MER1_type -88 101 31 2278 75 27 7 chr4 143853 144147 -184144515 + AluSg SINE Alu 1 300 -10 2466 144 64 9 chr4 144174 144596 -184144066 - LTR56 LTR ERV1 0 445 1 2091 119 20 0 chr4 145622 145924 -184142738 + AluSc SINE Alu 1 308 -1 2109 142 0 0 chr4 145929 146231 -184142431 + AluSg SINE Alu 1 302 -8 784 266 55 48 chr4 146404 146940 -184141722 - L1M1 LINE L1 -4484 1898 1281 2431 82 3 3 chr4 147324 147628 -184141034 + AluY SINE Alu 1 304 -7 255 313 57 52 chr4 147824 148016 -184140646 - L1M1 LINE L1 -5613 690 498 2321 108 0 0 chr4 151642 151949 -184136713 + AluSp SINE Alu 1 307 -6 984 139 36 0 chr4 152833 152998 -184135664 - L1MA3 LINE L1 -8 6297 6127 2215 108 0 0 chr4 154345 154640 -184134022 - AluY SINE Alu -16 295 1 486 245 141 12 chr4 155042 155205 -184133457 - MIR SINE MIR -75 187 4 2392 72 0 3 chr4 155247 155540 -184133122 - AluY SINE Alu -19 292 1 2134 119 13 13 chr4 155643 155946 -184132716 + AluSq SINE Alu 3 305 -8 422 290 108 42 chr4 155948 156108 -184132554 + L1M3c LINE L1 1267 1415 -4726 2213 99 3 49 chr4 156108 156432 -184132230 + AluSc SINE Alu 1 309 0 422 290 108 42 chr4 156432 156605 -184132057 + L1M3c LINE L1 1415 1622 -4519 437 198 40 24 chr4 156745 156871 -184131791 + MER67C LTR ERV1 10 137 -573 1161 254 82 30 chr4 156874 157505 -184131157 - L1 LINE L1 -2963 3183 2363 2010 119 6 50 chr4 157505 157845 -184130817 - AluSx SINE Alu 0 312 1 1161 254 82 30 chr4 157845 158037 -184130625 - L1 LINE L1 -3783 2363 2182 464 280 128 29 chr4 158039 158282 -184130380 - MSTD LTR MaLR 0 396 191 1844 127 4 4 chr4 158290 158565 -184130097 + AluSg SINE Alu 1 275 -35 366 248 67 0 chr4 158667 158772 -184129890 + L1MB2 LINE L1 5893 6004 -167 238 189 79 87 chr4 158848 158975 -184129687 - TAR1 Satellite telomeric -1926 185 60 * 1947 213 72 44 chr4 158868 159409 -184129253 - LTR60 LTR ERV1 -30 556 1 653 327 40 32 chr4 159617 159993 -184128669 - LTR60-int LTR ERV1 -281 6924 6546 251 215 15 15 chr4 160237 160302 -184128360 - LTR60-int LTR ERV1 -476 6509 6445 367 360 56 27 chr4 162058 162453 -184126209 - HERV30 LTR ERV1 -2011 5862 4698 2370 78 0 0 chr4 162691 163008 -184125654 + AluY SINE Alu 1 317 0 459 71 0 100 chr4 163217 163287 -184125375 - Alu SINE Alu -254 64 2 768 206 41 18 chr4 163355 163525 -184125137 - L1 LINE L1 -2055 4091 3918 2805 218 115 15 chr4 163555 164138 -184124524 + L1 LINE L1 4408 5106 -1040 2364 93 0 0 chr4 164138 164438 -184124224 + AluSg SINE Alu 1 300 -10 2805 218 115 15 chr4 164438 164712 -184123950 + L1 LINE L1 5106 5351 -795 2344 111 0 0 chr4 164923 165230 -184123432 - AluSg SINE Alu -3 307 1 2147 120 3 0 chr4 165460 165761 -184122901 - AluSg SINE Alu -8 302 1 1039 217 80 35 chr4 165877 166326 -184122336 - L1MA8 LINE L1 -4 6287 5748 2133 110 7 27 chr4 166460 166760 -184121902 + AluSq SINE Alu 1 294 -19 304 250 115 0 chr4 166760 166856 -184121806 - MIR SINE MIR -75 187 81 325 327 73 14 chr4 167101 167321 -184121341 - HAL1 LINE L1 -295 2212 1980 286 290 9 9 chr4 167381 167488 -184121174 + HERVFH21 LTR ERV1 3967 4073 -2456 851 113 0 0 chr4 167488 167612 -184121050 - AluSg/x SINE Alu -4 308 185 2120 105 0 51 chr4 167744 168057 -184120605 - AluSx SINE Alu -14 298 2 883 209 37 81 chr4 168091 168345 -184120317 + L1MA9 LINE L1 5002 5235 -911 2156 116 14 0 chr4 168345 168637 -184120025 + AluY SINE Alu 1 296 -15 883 209 37 81 chr4 168637 168764 -184119898 + L1MA9 LINE L1 5235 5366 -780 2162 178 84 115 chr4 168767 168850 -184119812 + L1MA9 LINE L1 5518 5602 -710 2450 70 0 0 chr4 168850 169149 -184119513 + AluY SINE Alu 1 299 -12 2259 115 3 0 chr4 169152 169457 -184119205 + AluSp SINE Alu 1 306 -7 2162 178 84 115 chr4 169457 169604 -184119058 + L1MA9 LINE L1 5604 5754 -558 249 133 0 0 chr4 169604 169649 -184119013 + LTR66 LTR ERVL 394 438 -172 2162 178 84 115 chr4 169649 170162 -184118500 + L1MA9 LINE L1 5754 6286 -26 311 185 31 31 chr4 170193 170258 -184118404 - MER6 DNA MER2_type 0 865 801 1108 304 43 45 chr4 170388 170560 -184118102 - L1M4 LINE L1 -1954 4192 4021 2489 82 0 0 chr4 170560 170863 -184117799 - AluSg SINE Alu -7 303 1 1108 304 43 45 chr4 170863 171130 -184117532 - L1M4 LINE L1 -2125 4021 3752 2269 97 3 7 chr4 171130 171430 -184117232 - AluSc SINE Alu -10 299 1 1108 304 43 45 chr4 171430 171680 -184116982 - L1M4 LINE L1 -2394 3752 3503 335 309 133 21 chr4 171753 171941 -184116721 - L1M4 LINE L1 -1194 4952 4744 1619 111 0 0 chr4 171979 172195 -184116467 - AluSq SINE Alu -12 301 86 635 146 89 8 chr4 172299 172422 -184116240 + LTR23 LTR ERV1 300 432 -5 183 211 58 19 chr4 173311 173363 -184115299 - L2 LINE L2 -85 3228 3175 26 0 0 0 chr4 174117 174143 -184114519 + AT_rich Low_complexity Low_complexity 1 26 0 207 0 0 0 chr4 174195 174218 -184114444 + (T)n Simple_repeat Simple_repeat 1 23 0 2200 110 10 0 chr4 174537 174836 -184113826 - AluSg SINE Alu -6 304 3 221 340 88 25 chr4 175202 175361 -184113301 - MER5B DNA MER1_type -1 177 9 7893 82 16 19 chr4 175864 176874 -184111788 + LTR13 LTR ERVK 1 1007 0 456 67 0 0 chr4 176877 176937 -184111725 + (TATG)n Simple_repeat Simple_repeat 2 61 0 2141 106 3 3 chr4 176939 177222 -184111440 - AluSq SINE Alu -30 283 1 6565 220 24 15 chr4 177233 177269 -184111393 - L1PA12 LINE L1 -4329 3255 3221 2695 151 37 31 chr4 177269 177758 -184110904 - LTR22B LTR ERVK 0 492 1 6565 220 24 15 chr4 177758 179991 -184108671 - L1PA12 LINE L1 -4363 3221 178 1766 250 144 5 chr4 180151 180762 -184107900 - MER67C LTR ERV1 -14 696 1 366 273 76 73 chr4 181437 181781 -184106881 - MER21B LTR ERV1 -75 856 416 262 323 8 16 chr4 181813 181937 -184106725 + MER93b LTR ERV1 215 337 -36 335 231 0 23 chr4 182771 182901 -184105761 + (CA)n Simple_repeat Simple_repeat 2 128 0 597 240 190 14 chr4 184114 184335 -184104327 + MIR SINE MIR 2 261 -1 237 221 0 0 chr4 185232 185300 -184103362 + (TCCA)n Simple_repeat Simple_repeat 3 70 0 317 254 164 25 chr4 185728 185850 -184102812 + MIR3 SINE MIR 7 145 -63 2023 139 0 0 chr4 186267 186572 -184102090 - AluSx SINE Alu 0 305 1 22 56 0 0 chr4 186572 186608 -184102054 + AT_rich Low_complexity Low_complexity 1 36 0 23 68 0 0 chr4 186767 186811 -184101851 + AT_rich Low_complexity Low_complexity 1 44 0 1959 100 8 0 chr4 187039 187298 -184101364 - AluSq SINE Alu -52 261 1 21 36 0 0 chr4 187298 187326 -184101336 + AT_rich Low_complexity Low_complexity 1 28 0 231 108 27 0 chr4 187384 187421 -184101241 + Alu SINE Alu 61 98 -204 496 95 0 0 chr4 187522 187585 -184101077 - AluJ/FLAM SINE Alu -248 64 2 476 165 10 39 chr4 187823 187926 -184100736 - SVA Other Other -704 682 583 2490 76 3 0 chr4 188576 188878 -184099784 - AluSp SINE Alu -10 303 1 2423 91 0 3 chr4 188878 189187 -184099475 - AluY SINE Alu -2 309 2 2091 120 6 35 chr4 189790 190107 -184098555 - AluSq SINE Alu -5 308 1 2014 123 41 3 chr4 190470 190762 -184097900 + AluSg SINE Alu 1 303 -7 265 256 174 25 chr4 191016 191137 -184097525 - MIR3 SINE MIR -63 145 7 2331 107 0 0 chr4 191184 191484 -184097178 + AluSc SINE Alu 1 300 -9 333 162 0 0 chr4 191778 191846 -184096816 + (TGGA)n Simple_repeat Simple_repeat 3 70 0 1161 257 75 32 chr4 192845 193482 -184095180 + L2 LINE L2 2624 3277 -36 2004 123 77 40 chr4 193780 194131 -184094531 + THE1B LTR MaLR 1 364 0 7838 108 12 2 chr4 194131 195208 -184093454 + THE1B-int LTR MaLR 1 1088 -492 2339 176 18 17 chr4 195205 195843 -184092819 - L1P4 LINE L1 -486 5680 5044 * 394 192 0 19 chr4 195878 195982 -184092680 + CT-rich Low_complexity Low_complexity 2 103 0 1156 248 6 58 chr4 196110 196280 -184092382 - AluJb SINE Alu -6 296 148 2252 116 0 0 chr4 196280 196572 -184092090 - AluSg SINE Alu -18 292 1 1156 248 6 58 chr4 196572 196712 -184091950 - AluJb SINE Alu -154 148 2 2432 83 3 0 chr4 196929 197229 -184091433 - AluSp SINE Alu -11 302 2 2265 92 7 13 chr4 197239 197545 -184091117 - AluY SINE Alu -7 304 1 195 218 55 0 chr4 199137 199192 -184089470 + MER5A DNA MER1_type 56 113 -76 2412 86 0 3 chr4 199385 199689 -184088973 + AluY SINE Alu 1 303 -8 299 226 0 47 chr4 199916 200022 -184088640 + L1ME3A LINE L1 6068 6168 -2 373 98 0 33 chr4 200107 200168 -184088494 + Alu SINE Alu 237 295 -7 430 240 23 76 chr4 200581 200752 -184087910 - MER5B DNA MER1_type -16 162 1 3677 122 48 2 chr4 201713 202288 -184086374 + MER51C LTR ERV1 1 640 0 662 228 13 27 chr4 202998 203147 -184085515 + MER61D LTR ERV1 338 484 -17 966 221 100 7 chr4 203350 203630 -184085032 + MER33 DNA MER1_type 5 310 -14 353 266 80 62 chr4 204518 204792 -184083870 + MER21A LTR ERV1 578 856 -75 237 81 27 0 chr4 205551 205588 -184083074 + MER67C LTR ERV1 69 106 -604 1770 100 4 0 chr4 205589 205828 -184082834 - AluSx SINE Alu -11 301 62 4750 25 7 4 chr4 205832 206388 -184082274 - LTR6B LTR ERV1 0 558 1 420 121 0 0 chr4 206388 206446 -184082216 - AluSx SINE Alu -250 61 4 1264 239 48 5 chr4 206450 206974 -184081688 + MER67C LTR ERV1 101 706 -4 7520 39 11 0 chr4 207350 208460 -184080202 - L1PA5 LINE L1 -7 6147 5035 740 211 45 0 chr4 208579 208735 -184079927 + LTR56 LTR ERV1 1 163 -282 1223 124 43 0 chr4 208739 208924 -184079738 - AluY SINE Alu 0 311 119 578 208 9 123 chr4 258925 259137 -184029525 - AluJb SINE Alu -115 197 10 652 265 69 26 chr4 259146 259493 -184029169 + L1 LINE L1 4308 4669 -1477 2135 61 18 4 chr4 259506 259813 -184028849 + AluY SINE Alu 1 311 0 1033 198 52 71 chr4 259831 260155 -184028507 + L1MA9 LINE L1 5969 6286 -26 369 236 133 15 chr4 260182 260363 -184028299 + MER6 DNA MER2_type -65 861 -4 200 216 0 0 chr4 260512 260549 -184028113 - MIR SINE MIR -17 245 209 576 134 0 0 chr4 260602 260684 -184027978 - MER30B DNA MER1_type 0 190 109 2086 93 10 10 chr4 260685 260987 -184027675 + AluSc SINE Alu 1 302 -7 1623 216 74 13 chr4 260990 261577 -184027085 - MER67C LTR ERV1 -31 679 1 350 295 79 44 chr4 262261 262622 -184026040 - MER21B LTR ERV1 -75 856 416 346 276 48 28 chr4 262654 262799 -184025863 + MER93a LTR ERV1 244 391 -11 1947 106 34 0 chr4 263500 263792 -184024870 - AluSq SINE Alu -11 302 1 216 254 0 0 chr4 263894 263953 -184024709 + (CACG)n Simple_repeat Simple_repeat 1 59 0 431 218 92 0 chr4 264070 264212 -184024450 - MER33 DNA MER1_type -14 349 195 229 269 0 0 chr4 264213 264265 -184024397 + LTR30 LTR ERV1 1 52 -670 808 136 8 15 chr4 264265 264397 -184024265 + LTR12 LTR ERV1 53 183 -531 279 253 30 20 chr4 264521 264620 -184024042 + LTR30 LTR ERV1 544 643 -79 678 122 20 0 chr4 264622 264720 -184023942 + LTR12 LTR ERV1 615 714 0 2374 72 0 3 chr4 264742 265047 -184023615 + AluY SINE Alu 2 305 -6 451 287 26 0 chr4 265066 265181 -184023481 - MER33 DNA MER1_type -206 118 1 693 191 52 111 chr4 265385 265545 -184023117 - MER61D LTR ERV1 -17 732 564 2048 96 7 13 chr4 265545 265846 -184022816 - AluSq SINE Alu -3 310 12 693 191 52 111 chr4 265846 265892 -184022770 - MER61D LTR ERV1 -185 564 340 3807 132 20 0 chr4 266567 267155 -184021507 - MER51C LTR ERV1 0 640 1 1219 275 123 24 chr4 267291 267753 -184020909 - MLT1H LTR MaLR 0 549 34 2006 123 3 3 chr4 267753 268054 -184020608 - AluSq SINE Alu -12 301 1 1219 275 123 24 chr4 268054 268085 -184020577 - MLT1H LTR MaLR -515 34 7 4869 194 23 6 chr4 268172 269607 -184019055 + L1PA16 LINE L1 4705 6162 -4 302 255 114 46 chr4 271116 271256 -184017406 + L1ME1 LINE L1 1087 1216 -5180 195 42 0 0 chr4 271256 271280 -184017382 + (TA)n Simple_repeat Simple_repeat 2 25 0 302 255 114 46 chr4 271280 271402 -184017260 + L1ME1 LINE L1 1216 1367 -5029 1455 232 81 45 chr4 271458 271728 -184016934 + L1ME1 LINE L1 2946 3205 -3010 279 0 0 0 chr4 271728 271759 -184016903 + (CA)n Simple_repeat Simple_repeat 2 32 0 1455 232 81 45 chr4 271759 272129 -184016533 + L1ME1 LINE L1 3205 3609 -2606 2702 216 77 64 chr4 272139 272406 -184016256 + L1ME1 LINE L1 5108 5370 -865 3412 148 60 5 chr4 272406 273008 -184015654 - MER41B LTR ERV1 0 635 1 2702 216 77 64 chr4 273008 273807 -184014855 + L1ME1 LINE L1 5370 6185 -50 629 189 9 0 chr4 273807 273918 -184014744 - FRAM SINE Alu -19 157 46 339 149 0 1 chr4 273936 274075 -184014587 + Alu SINE Alu 244 372 0 1674 153 13 13 chr4 274271 274571 -184014091 - AluSx SINE Alu -12 300 1 243 319 14 0 chr4 274884 274953 -184013709 - L2 LINE L2 -82 3190 3121 1623 203 56 43 chr4 274986 275429 -184013233 + LTR2 LTR ERV1 1 449 0 1522 147 25 81 chr4 276331 276700 -184011962 - MER4A LTR ERV1 -2 662 256 464 133 44 11 chr4 276695 276785 -184011877 - MER4A LTR ERV1 -566 98 6 * 266 241 169 96 chr4 276981 277230 -184011432 + L2 LINE L2 2630 2896 -418 202 188 31 115 chr4 277679 277775 -184010887 - MIR SINE MIR -82 126 39 802 235 270 27 chr4 278336 279077 -184009585 - L2 LINE L2 -5 3308 2364 216 246 18 0 chr4 279139 279196 -184009466 + L2 LINE L2 2921 2978 -294 279 246 114 18 chr4 279421 279535 -184009127 + MIR SINE MIR 18 142 -66 21 0 0 0 chr4 280052 280073 -184008589 + GC_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr4 280357 280379 -184008283 + GC_rich Low_complexity Low_complexity 1 22 0 40 59 0 0 chr4 283342 283410 -184005252 + AT_rich Low_complexity Low_complexity 1 68 0 390 268 117 0 chr4 283613 283738 -184004924 - MIR SINE MIR -63 145 24 522 243 185 14 chr4 283765 283987 -184004675 + MIR SINE MIR 2 261 -1 249 275 29 0 chr4 284876 284945 -184003717 + (TCCA)n Simple_repeat Simple_repeat 3 73 0 322 200 156 22 chr4 285402 285492 -184003170 + MIR SINE MIR 44 145 -63 2704 275 20 12 chr4 285713 286463 -184002199 + L1PA12 LINE L1 524 1279 -6302 1705 141 121 0 chr4 286463 286776 -184001886 - MER61C LTR ERV1 0 434 84 10541 125 22 22 chr4 286799 288253 -184000409 - MER61C-int LTR ERV1 -9 5208 3755 2029 83 0 4 chr4 288253 288507 -184000155 + AluY SINE Alu 41 293 -18 10541 125 22 22 chr4 288507 288547 -184000115 - MER61C-int LTR ERV1 -1462 3755 3716 2146 112 0 27 chr4 288547 288842 -183999820 + AluSg SINE Alu 1 287 -23 10541 125 22 22 chr4 288842 290480 -183998182 - MER61C-int LTR ERV1 -1501 3716 1971 1194 170 48 15 chr4 290458 290729 -183997933 - MER61C-int LTR ERV1 -3577 1640 1361 * 4143 142 81 62 chr4 290724 290856 -183997806 - MER61C-int LTR ERV1 -4004 1213 1085 2163 122 0 0 chr4 290856 291150 -183997512 + AluSc SINE Alu 1 294 -15 270 81 0 0 chr4 291150 291187 -183997475 + (TG)n Simple_repeat Simple_repeat 2 38 0 4143 142 81 62 chr4 291187 291401 -183997261 - MER61C-int LTR ERV1 -4132 1085 877 2023 130 20 0 chr4 291401 291693 -183996969 - AluSg SINE Alu -12 298 1 4143 142 81 62 chr4 291693 292509 -183996153 - MER61C-int LTR ERV1 -4340 877 4 1027 151 53 7 chr4 292517 292626 -183996036 - MER61C LTR ERV1 -6 419 317 204 40 0 0 chr4 292626 292651 -183996011 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1027 151 53 7 chr4 292651 292840 -183995822 - MER61C LTR ERV1 -108 317 84 248 172 0 52 chr4 292855 292913 -183995749 + L1PA12 LINE L1 736 790 -6791 * 1257 196 39 15 chr4 292894 293198 -183995464 + L1PA12 LINE L1 1358 2460 -5124 1474 182 56 25 chr4 293530 293888 -183994774 + THE1C LTR MaLR 1 369 -6 8897 145 62 3 chr4 293893 295385 -183993277 + THE1C-int LTR MaLR 1 1580 0 518 185 23 39 chr4 295385 295515 -183993147 + THE1C LTR MaLR 1 128 -247 1706 145 0 0 chr4 295515 295756 -183992906 - AluSg SINE Alu -69 241 1 394 159 0 0 chr4 295756 295825 -183992837 + MSTA LTR MaLR 360 428 0 239 218 0 64 chr4 296033 296111 -183992551 + T-rich Low_complexity Low_complexity 2 74 0 21 71 0 0 chr4 296184 296226 -183992436 + AT_rich Low_complexity Low_complexity 1 42 0 203 158 0 0 chr4 296508 296546 -183992116 + (CA)n Simple_repeat Simple_repeat 1 38 0 923 292 49 35 chr4 296566 297214 -183991448 + L1MB2 LINE L1 4539 5195 -951 1299 252 47 70 chr4 297301 297564 -183991098 + L1MB2 LINE L1 5341 5608 -563 1847 200 0 0 chr4 297564 297864 -183990798 + AluJb SINE Alu 12 311 -1 1299 252 47 70 chr4 297864 298214 -183990448 + L1MB2 LINE L1 5608 5940 -231 23 0 0 0 chr4 299213 299236 -183989426 + AT_rich Low_complexity Low_complexity 1 23 0 733 168 37 47 chr4 299759 299785 -183988877 + L1MA3 LINE L1 6118 6143 -162 2237 112 0 3 chr4 299785 300088 -183988574 + AluSg SINE Alu 1 302 -8 733 168 37 47 chr4 300088 300251 -183988411 + L1MA3 LINE L1 6143 6305 0 257 371 41 22 chr4 302161 302428 -183986234 + L1MB2 LINE L1 7 278 -5613 302 310 180 4 chr4 302803 303048 -183985614 + L1MB2 LINE L1 369 656 -5316 723 285 88 13 chr4 303048 303475 -183985187 + L1MB2 LINE L1 903 1513 -4638 348 313 125 6 chr4 303651 303827 -183984835 + L1MB2 LINE L1 1627 1823 -4149 464 274 78 32 chr4 303917 304136 -183984526 + L1MB2 LINE L1 1816 2044 -3928 2360 87 10 13 chr4 304152 304463 -183984199 - AluY SINE Alu -1 310 1 624 284 50 27 chr4 304646 304727 -183983935 + L1MB2 LINE L1 2204 2282 -3688 186 43 0 0 chr4 304727 304750 -183983912 + (TG)n Simple_repeat Simple_repeat 2 24 0 624 284 50 27 chr4 304750 305112 -183983550 + L1MB2 LINE L1 2282 2657 -3313 2349 107 3 3 chr4 305117 305427 -183983235 + AluSp SINE Alu 1 310 -3 463 289 63 14 chr4 305507 305791 -183982871 + L1MB2 LINE L1 4373 4670 -1300 918 278 72 11 chr4 305804 306246 -183982416 + L1MB2 LINE L1 5499 5967 -28 2690 43 3 6 chr4 306617 306966 -183981696 + L1PA8 LINE L1 5805 6152 -20 2026 83 72 10 chr4 306967 307334 -183981328 + LTR7 LTR ERV1 1 450 0 571 177 24 79 chr4 307354 307481 -183981181 - L1 LINE L1 -2085 4061 3943 2312 86 14 0 chr4 307481 307772 -183980890 + AluSp SINE Alu 1 295 -18 571 177 24 79 chr4 307772 307808 -183980854 - L1 LINE L1 -2203 3943 3907 1578 207 58 50 chr4 307823 308360 -183980302 + L1MB2 LINE L1 4400 4940 -1206 1084 266 62 23 chr4 308362 308808 -183979854 + L1MB2 LINE L1 5662 6130 -41 1890 118 93 0 chr4 308808 309088 -183979574 + AluSp SINE Alu 1 306 -7 1084 266 62 23 chr4 309088 309126 -183979536 + L1MB2 LINE L1 6130 6165 -6 2270 70 0 0 chr4 309493 309800 -183978862 + AluY SINE Alu 1 307 0 2342 267 76 30 chr4 309811 311420 -183977242 + L1MA3 LINE L1 357 1859 -4176 369 173 0 13 chr4 311492 311567 -183977095 + AluJo SINE Alu 61 134 -168 1594 211 0 14 chr4 311606 311891 -183976771 + AluJb SINE Alu 1 281 -31 258 213 0 0 chr4 312118 312179 -183976483 + L1MA3 LINE L1 1969 2029 -4006 933 283 92 17 chr4 312224 312581 -183976081 + MSTD LTR MaLR 1 384 -12 407 289 66 17 chr4 312591 312878 -183975784 + L1MA3 LINE L1 2071 2371 -3663 592 111 10 20 chr4 312878 312977 -183975685 + MER4A LTR ERV1 1 98 -566 1526 117 27 94 chr4 313026 313324 -183975338 + MER4A LTR ERV1 372 649 -15 392 235 138 18 chr4 313330 313547 -183975115 + L1MA3 LINE L1 2374 2616 -3418 1188 184 28 14 chr4 313556 313774 -183974888 - AluJb SINE Alu -91 221 1 733 264 69 39 chr4 313792 314158 -183974504 - MER21B LTR ERV1 -83 848 402 1063 246 110 25 chr4 314194 314696 -183973966 + MER92B LTR ERV1 46 402 -10 3309 217 64 5 chr4 316407 317165 -183971497 + L1MA3 LINE L1 3973 4793 -1241 1891 163 7 3 chr4 317165 317459 -183971203 + AluSx SINE Alu 1 295 -17 3309 217 64 5 chr4 317459 317590 -183971072 + L1MA3 LINE L1 4793 4915 -1119 287 104 0 21 chr4 317590 317638 -183971024 + LTR22B LTR ERVK 1 47 -445 1652 104 4 24 chr4 317648 317898 -183970764 + LTR22B LTR ERVK 248 492 0 5132 177 27 19 chr4 317901 319182 -183969480 + L1MA3 LINE L1 4913 6192 -1 26 0 0 0 chr4 319182 319208 -183969454 + AT_rich Low_complexity Low_complexity 1 26 0 263 350 45 29 chr4 319231 319474 -183969188 + L1MB2 LINE L1 35 281 -5610 1997 81 78 0 chr4 319641 319912 -183968750 + AluY SINE Alu 6 297 -14 443 305 85 20 chr4 319915 320115 -183968547 + L1MB2 LINE L1 4463 4675 -1295 899 270 38 15 chr4 320117 320458 -183968204 + L1MB2 LINE L1 5499 5847 -148 558 168 50 0 chr4 320493 320612 -183968050 - L1PA13 LINE L1 -2 6161 6037 1335 281 45 16 chr4 320752 321357 -183967305 + L1MB1 LINE L1 4535 5156 -990 1886 231 91 12 chr4 321448 321834 -183966828 + L1MB1 LINE L1 5283 5744 -424 2151 186 26 7 chr4 321834 322254 -183966408 - MSTA LTR MaLR 0 428 1 1886 231 91 12 chr4 322254 322524 -183966138 + L1MB1 LINE L1 5744 5991 -177 556 324 18 77 chr4 322522 322979 -183965683 + L1M3a LINE L1 125 554 -5401 * 306 226 0 0 chr4 323121 323183 -183965479 + MER6B DNA MER2_type 3 64 -212 572 181 0 0 chr4 323233 323327 -183965335 - AluS SINE Alu -217 96 3 477 228 58 92 chr4 323332 323447 -183965215 - L1 LINE L1 -1717 4317 4200 599 186 0 64 chr4 323447 323587 -183965075 + FLAM_C SINE Alu 1 131 -2 477 228 58 92 chr4 323587 323830 -183964832 - L1 LINE L1 -1834 4200 3971 328 291 0 18 chr4 323944 324054 -183964608 - L1 LINE L1 -5149 806 699 1418 102 0 11 chr4 324062 324248 -183964414 + AluSg/x SINE Alu 103 286 -24 23 0 0 0 chr4 324255 324278 -183964384 + AT_rich Low_complexity Low_complexity 1 23 0 2591 233 50 25 chr4 324315 325196 -183963466 + L1MA9 LINE L1 4464 5366 -780 1758 199 72 47 chr4 325202 325906 -183962756 + L1MA9 LINE L1 5521 6277 -35 420 230 110 31 chr4 325944 326135 -183962527 + MER6B DNA MER2_type 4 209 -1 1751 99 119 58 chr4 326365 326658 -183962004 + AluSx SINE Alu 1 311 -1 1106 123 0 64 chr4 326685 326888 -183961774 - MER30B DNA MER1_type 0 190 1 713 71 0 0 chr4 327091 327189 -183961473 + L1PA2 LINE L1 6057 6154 -1 181 174 92 184 chr4 329177 329286 -183959376 - MIR SINE MIR -9 253 155 195 244 0 0 chr4 330173 330214 -183958448 + L2 LINE L2 3191 3231 -82 2553 144 41 0 chr4 330943 331359 -183957303 - LTR56 LTR ERV1 -12 433 1 2064 211 145 21 chr4 331828 332455 -183956207 - MER67C LTR ERV1 -5 705 1 2311 67 3 24 chr4 332612 332910 -183955752 + AluY SINE Alu 1 292 -19 385 257 82 79 chr4 333446 333800 -183954862 - MER21A LTR ERV1 -75 856 502 315 298 8 16 chr4 333820 333944 -183954718 + MER93a LTR ERV1 244 366 -36 297 230 0 0 chr4 334761 334835 -183953827 + (CA)n Simple_repeat Simple_repeat 2 75 0 23 0 0 0 chr4 334951 334974 -183953688 + AT_rich Low_complexity Low_complexity 1 23 0 626 209 71 112 chr4 334977 335273 -183953389 - MER33 DNA MER1_type -40 284 1 739 205 32 30 chr4 335479 335687 -183952975 - MER61D LTR ERV1 -17 743 338 3504 129 51 5 chr4 336353 336926 -183951736 - MER51C LTR ERV1 0 640 2 940 175 30 0 chr4 336938 337104 -183951558 - MER67C LTR ERV1 -259 451 281 2548 63 0 3 chr4 337195 337498 -183951164 - AluY SINE Alu -9 302 1 43 112 0 0 chr4 338587 338784 -183949878 + AT_rich Low_complexity Low_complexity 1 197 0 291 242 0 61 chr4 339203 339302 -183949360 - MER67C LTR ERV1 -477 233 141 2223 113 0 0 chr4 340035 340500 -183948162 - AluSg SINE Alu 0 465 1 725 287 85 7 chr4 340558 340851 -183947811 - MER21B LTR ERV1 -125 738 423 2421 97 0 3 chr4 341287 341595 -183947067 - AluSq SINE Alu -6 307 1 1901 121 3 25 chr4 341895 342177 -183946485 + AluSq SINE Alu 28 303 -10 347 214 256 0 chr4 342883 343005 -183945657 + MIR SINE MIR 32 179 -57 2218 96 4 0 chr4 343214 343535 -183945127 + AluSp SINE Alu 3 324 0 456 283 65 27 chr4 344409 344593 -183944069 - MARNA DNA Mariner -196 390 200 29098 74 8 67 chr4 345012 346201 -183942461 + L1P LINE L1 11 1267 -4879 5550 153 20 17 chr4 346201 347151 -183941511 + LTR5 LTR ERVK 17 969 0 29098 74 8 67 chr4 347151 350294 -183938368 + L1P LINE L1 1267 4092 -2054 182 319 103 69 chr4 350557 350789 -183937873 + MIR SINE MIR 14 253 -9 6393 93 4 15 chr4 351866 352357 -183936305 + L1PA14 LINE L1 4872 5367 -794 2383 95 0 0 chr4 352357 352661 -183936001 + AluY SINE Alu 2 305 -6 6393 93 4 15 chr4 352661 353464 -183935198 + L1PA14 LINE L1 5367 6161 0 9261 58 4 2 chr4 355794 357735 -183930927 - L1PA5 LINE L1 0 6154 4207 201 132 0 0 chr4 359224 359262 -183929400 + (GA)n Simple_repeat Simple_repeat 1 38 0 23 0 0 0 chr4 360515 360538 -183928124 + AT_rich Low_complexity Low_complexity 1 23 0 180 0 0 0 chr4 360680 360700 -183927962 + (CAG)n Simple_repeat Simple_repeat 3 22 0 272 304 22 0 chr4 360869 360961 -183927701 - MIR SINE MIR -60 148 55 890 285 14 0 chr4 361684 361905 -183926757 - MER58A DNA MER1_type 0 224 1 282 74 56 0 chr4 362033 362087 -183926575 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 694 303 51 63 chr4 363707 364119 -183924543 - MLT1I LTR MaLR 0 409 3 318 260 0 10 chr4 364366 364558 -183924104 + (TTAGGG)n Simple_repeat Simple_repeat 1 190 0 1646 168 9 7 chr4 365244 365589 -183923073 - MER4A LTR ERV1 0 664 261 667 121 0 10 chr4 365589 365688 -183922974 - MER4A LTR ERV1 -566 98 1 4233 208 177 73 chr4 366570 367095 -183921567 - L1MC3 LINE L1 -1 7784 7315 279 219 14 14 chr4 367095 367168 -183921494 - MLT1F1 LTR MaLR -450 117 45 4233 208 177 73 chr4 367168 367665 -183920997 - L1MC3 LINE L1 -470 7315 6871 3531 208 25 62 chr4 367665 368666 -183919996 - LTR5 LTR ERVK 0 969 6 4233 208 177 73 chr4 368666 368994 -183919668 - L1MC3 LINE L1 -914 6871 6578 1757 184 36 65 chr4 368994 369439 -183919223 - MSTB1 LTR MaLR 0 432 1 4233 208 177 73 chr4 369439 369847 -183918815 - L1MC3 LINE L1 -1207 6578 5762 270 215 15 100 chr4 369994 370087 -183918575 - LTR37A LTR ERV1 -304 122 41 1612 152 98 0 chr4 370087 370351 -183918311 - AluJb SINE Alu -22 290 1 270 215 15 100 chr4 370351 370387 -183918275 - LTR37A LTR ERV1 -385 41 4 1875 189 29 11 chr4 370403 370778 -183917884 - MER31-int LTR ERV1 -696 4240 3859 1297 263 47 8 chr4 370819 371180 -183917482 - LTR10C LTR ERV1 -29 562 188 225 0 0 0 chr4 371202 371227 -183917435 + (CA)n Simple_repeat Simple_repeat 2 26 0 681 174 12 81 chr4 371299 371471 -183917191 - MER31-int LTR ERV1 -1064 3872 3713 7545 34 0 3 chr4 371572 372926 -183915736 - L1PA4 LINE L1 -3 6152 4811 2462 213 47 72 chr4 372926 373565 -183915097 - MER31-int LTR ERV1 -1207 3729 3112 2234 93 0 0 chr4 373565 373874 -183914788 - AluY SINE Alu 0 310 2 2462 213 47 72 chr4 373874 374044 -183914618 - MER31-int LTR ERV1 -1824 3112 2939 1222 214 82 55 chr4 374058 374567 -183914095 - MER31-int LTR ERV1 -2705 2231 1709 1132 154 75 143 chr4 374576 375030 -183913632 + LTR60 LTR ERV1 127 549 -37 * 4151 137 75 166 chr4 374870 377499 -183911163 + TAR1 Satellite telomeric 1 2388 -233 1409 6 11 11 chr4 377499 377679 -183910983 + (TTAGGG)n Simple_repeat Simple_repeat 1 180 0 1857 272 70 19 chr4 577694 577762 -183710900 + L1M4 LINE L1 2197 2260 -3886 2060 120 0 7 chr4 577762 578070 -183710592 + AluSx SINE Alu 2 307 -5 1857 272 70 19 chr4 578070 578692 -183709970 + L1M4 LINE L1 2260 2922 -3224 1894 140 105 79 chr4 579213 579330 -183709332 - Tigger1 DNA MER2_type -8 2410 2297 1851 173 0 7 chr4 579330 579636 -183709026 - AluJb SINE Alu -8 304 1 1894 140 105 79 chr4 579636 579668 -183708994 - Tigger1 DNA MER2_type -121 2297 2267 2131 109 0 10 chr4 579668 579971 -183708691 - AluSg SINE Alu -10 300 1 1894 140 105 79 chr4 579971 580326 -183708336 - Tigger1 DNA MER2_type -151 2267 1892 331 294 9 0 chr4 580427 580536 -183708126 + L1MEc LINE L1 636 745 -5651 281 75 0 0 chr4 580543 580583 -183708079 + Alu SINE Alu 1 40 -263 318 332 5 53 chr4 580753 580844 -183707818 + HAL1 LINE L1 1 80 -2427 2192 118 0 0 chr4 580844 581149 -183707513 + AluSg SINE Alu 1 305 -5 318 332 5 53 chr4 581149 581247 -183707415 + HAL1 LINE L1 80 181 -2326 286 261 85 39 chr4 581636 581789 -183706873 + HAL1 LINE L1 689 848 -1659 677 226 35 49 chr4 581889 582079 -183706583 - MER54B LTR ERVL -114 679 491 1851 126 10 7 chr4 582079 582372 -183706290 - AluSx SINE Alu -18 294 1 677 226 35 49 chr4 582372 582407 -183706255 - MER54B LTR ERVL -302 491 457 322 311 136 60 chr4 582808 583647 -183705015 - L1M2 LINE L1 -5578 1271 369 1370 249 68 66 chr4 584428 584530 -183704132 - L1M4 LINE L1 -876 5270 5170 1474 187 21 7 chr4 584530 584814 -183703848 + AluJo SINE Alu 1 288 -24 1370 249 68 66 chr4 584814 585494 -183703168 - L1M4 LINE L1 -976 5170 4487 707 82 21 0 chr4 585604 585701 -183702961 - AluSg/x SINE Alu -14 295 197 1761 111 0 8 chr4 585703 585947 -183702715 - AluSg SINE Alu -68 242 1 * 2033 113 7 20 chr4 585947 586247 -183702415 - AluSq SINE Alu -17 296 1 1166 131 0 17 chr4 586392 586568 -183702094 + AluJo SINE Alu 17 189 -123 726 226 0 20 chr4 586725 586871 -183701791 + AluJb SINE Alu 150 292 -20 22 70 0 0 chr4 587043 587086 -183701576 + GC_rich Low_complexity Low_complexity 1 43 0 211 272 27 34 chr4 587114 587261 -183701401 + (CCCCG)n Simple_repeat Simple_repeat 4 149 0 * 337 275 0 67 chr4 587163 587356 -183701306 + C-rich Low_complexity Low_complexity 1 180 0 22 56 0 0 chr4 587383 587419 -183701243 + GC_rich Low_complexity Low_complexity 1 36 0 25 31 0 0 chr4 587441 587473 -183701189 + GC_rich Low_complexity Low_complexity 1 32 0 478 172 57 0 chr4 590691 590848 -183697814 + (CAGAGA)n Simple_repeat Simple_repeat 1 166 0 2137 184 44 0 chr4 591021 591456 -183697206 - MER54B LTR ERVL -339 454 1 344 179 0 38 chr4 591491 591597 -183697065 + HAL1 LINE L1 1029 1130 -1377 2397 88 0 0 chr4 591597 591902 -183696760 + AluSx SINE Alu 1 305 -7 237 291 63 0 chr4 591902 591981 -183696681 + HAL1 LINE L1 2049 2132 -375 2417 76 0 3 chr4 592682 592986 -183695676 - AluSg SINE Alu -7 303 1 1337 153 19 0 chr4 593096 593312 -183695350 + AluJb SINE Alu 85 304 -8 189 0 0 0 chr4 593715 593736 -183694926 + (A)n Simple_repeat Simple_repeat 1 21 0 2203 90 3 13 chr4 593740 594041 -183694621 + AluSx SINE Alu 1 298 -14 385 234 46 46 chr4 596549 596724 -183691938 + (CAGCC)n Simple_repeat Simple_repeat 1 175 0 579 176 12 18 chr4 598549 598719 -183689943 + (TCTCTG)n Simple_repeat Simple_repeat 3 171 0 353 314 45 125 chr4 599358 599491 -183689171 - L1M4 LINE L1 -2972 3174 3032 2221 106 3 0 chr4 599491 599792 -183688870 - AluSp SINE Alu -11 302 1 2022 91 60 24 chr4 599800 600098 -183688564 - AluSg SINE Alu -1 309 1 353 314 45 125 chr4 600098 600148 -183688514 - L1M4 LINE L1 -3121 3025 2973 1323 199 64 18 chr4 600148 600430 -183688232 - AluJo SINE Alu -4 298 4 353 314 45 125 chr4 600430 600707 -183687955 - L1M4 LINE L1 -3173 2973 2742 407 349 88 0 chr4 600768 600960 -183687702 + MIR SINE MIR 7 215 -47 897 204 19 0 chr4 603516 603673 -183684989 - FRAM SINE Alu -6 160 1 2150 76 38 3 chr4 603701 603991 -183684671 + AluY SINE Alu 1 300 -11 1829 87 61 4 chr4 603994 604258 -183684404 + AluSq SINE Alu 1 279 -34 418 350 154 28 chr4 605688 606051 -183682611 - L1M4 LINE L1 -787 5359 4951 2174 93 13 7 chr4 606232 606534 -183682128 - AluSp SINE Alu -1 312 9 2033 125 0 7 chr4 606544 606840 -183681822 - AluSx SINE Alu -18 294 1 951 181 43 11 chr4 606940 607128 -183681534 - L1MB3 LINE L1 -1 6182 5989 270 316 118 0 chr4 607156 607292 -183681370 + L1MB8 LINE L1 6026 6177 -1 1670 145 71 18 chr4 607945 608228 -183680434 - AluJo SINE Alu -14 298 1 1228 207 13 53 chr4 608230 608516 -183680146 + L1ME1 LINE L1 4895 5164 -982 3543 154 71 119 chr4 608516 609112 -183679550 + MER21A LTR ERV1 1 533 -398 2210 119 0 0 chr4 609112 609415 -183679247 + AluSx SINE Alu 1 303 -9 3543 154 71 119 chr4 609415 609793 -183678869 + MER21A LTR ERV1 533 928 -3 1228 207 13 53 chr4 609793 609883 -183678779 + L1ME1 LINE L1 5164 5256 -890 941 88 0 0 chr4 609884 610009 -183678653 + AluSx SINE Alu 1 125 -188 189 171 0 0 chr4 610009 610044 -183678618 + (CATATA)n Simple_repeat Simple_repeat 4 38 0 263 221 23 0 chr4 610049 610135 -183678527 + L1MC4 LINE L1 6614 6701 -1341 832 157 0 0 chr4 610136 610270 -183678392 + AluSx SINE Alu 1 134 -178 207 162 0 0 chr4 610270 610307 -183678355 + (CATATA)n Simple_repeat Simple_repeat 2 38 0 246 218 51 0 chr4 610312 610390 -183678272 + L1MC4 LINE L1 6614 6695 -1347 1160 147 0 0 chr4 610390 610560 -183678102 + AluSx SINE Alu 123 292 -18 2175 92 0 30 chr4 610564 610868 -183677794 + AluSg SINE Alu 1 295 -15 481 154 86 8 chr4 610874 610991 -183677671 + L1ME1 LINE L1 5258 5383 -950 1103 221 24 4 chr4 611047 611301 -183677361 + Tigger3(Golem) DNA MER2_type 2771 3029 0 2010 241 52 10 chr4 611305 611914 -183676748 + L1ME1 LINE L1 5352 5986 -180 813 304 67 52 chr4 612010 612199 -183676463 + L1 LINE L1 2745 2930 -3216 2157 113 0 10 chr4 612199 612500 -183676162 + AluSg SINE Alu 1 298 -12 813 304 67 52 chr4 612500 612731 -183675931 + L1 LINE L1 2930 3171 -2975 762 310 21 7 chr4 612827 612920 -183675742 + MER7A DNA MER2_type 1 91 -2947 2147 61 40 24 chr4 612920 613216 -183675446 - AluY SINE Alu -10 301 1 1918 126 42 3 chr4 613216 613502 -183675160 - AluSx SINE Alu -15 297 1 762 310 21 7 chr4 613502 613694 -183674968 + MER7A DNA MER2_type 90 289 -57 644 354 51 60 chr4 613777 614276 -183674386 + L1 LINE L1 4208 4701 -1445 4368 157 22 1 chr4 614924 615662 -183673000 + L1MB3 LINE L1 5431 6183 0 5331 105 16 5 chr4 615667 617008 -183671654 + L1PA10 LINE L1 4724 6150 -18 2081 98 0 33 chr4 617008 617315 -183671347 - AluSq SINE Alu -16 297 1 1281 185 8 13 chr4 617517 617755 -183670907 + AluJb SINE Alu 1 237 -75 272 25 50 0 chr4 617762 617802 -183670860 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 322 381 59 23 chr4 618021 618525 -183670137 + L1 LINE L1 3081 3689 -2457 1141 309 127 35 chr4 619195 619575 -183669087 - L1ME1 LINE L1 -66 6100 5756 2542 59 0 0 chr4 619575 619880 -183668782 - AluY SINE Alu -6 305 1 1141 309 127 35 chr4 619880 620215 -183668447 - L1ME1 LINE L1 -410 5756 5319 2407 96 0 0 chr4 620215 620528 -183668134 - AluSq SINE Alu 0 313 1 627 202 0 0 chr4 620533 620637 -183668025 - FRAM SINE Alu -14 162 59 1928 134 7 3 chr4 622001 622292 -183666370 - AluJb SINE Alu -18 294 3 2252 78 0 10 chr4 623344 623639 -183665023 - AluY SINE Alu -19 292 1 617 185 92 0 chr4 623906 624025 -183664637 - FLAM_C SINE Alu -1 132 3 617 285 97 0 chr4 624156 624384 -183664278 - L1MC/D LINE L1 -586 5773 5524 2338 77 3 0 chr4 624696 624995 -183663667 - AluSx SINE Alu -12 300 1 1280 20 0 0 chr4 625013 625160 -183663502 - SVA Other Other 0 1386 1240 395 216 78 0 chr4 625163 625279 -183663383 - L1MC/D LINE L1 -817 5329 5205 1140 335 64 34 chr4 625487 625661 -183663001 - L1MC/D LINE L1 -1278 4868 4701 2392 55 3 0 chr4 625661 625952 -183662710 + AluY SINE Alu 1 292 -19 1140 335 64 34 chr4 625952 626562 -183662100 - L1MC/D LINE L1 -1445 4701 4061 2015 113 48 3 chr4 626584 626876 -183661786 + AluSx SINE Alu 1 305 -7 789 175 0 58 chr4 626889 627043 -183661619 - FRAM SINE Alu -24 152 8 734 231 95 27 chr4 627551 627772 -183660890 - AluJo SINE Alu -76 236 1 1243 271 60 17 chr4 627864 627934 -183660728 - L1MC/D LINE L1 -2211 3935 3869 528 114 13 0 chr4 627934 628013 -183660649 + MADE1 DNA Mariner 1 80 0 1243 271 60 17 chr4 628013 628478 -183660184 - L1MC/D LINE L1 -2277 3869 3377 236 368 129 21 chr4 628658 628998 -183659664 - L1MC/D LINE L1 -3010 3136 2760 310 299 17 0 chr4 629086 629203 -183659459 - L1MC/D LINE L1 -3538 2608 2490 724 213 0 7 chr4 630991 631132 -183657530 + AluJo SINE Alu 86 225 -87 716 194 8 8 chr4 631125 631259 -183657403 + AluJo/FRAM SINE Alu 163 296 -16 * 367 304 56 43 chr4 631309 631470 -183657192 + L1ME1 LINE L1 5262 5424 -2384 3678 183 56 67 chr4 631728 632206 -183656456 + Tigger1 DNA MER2_type 20 502 -1916 1631 157 27 20 chr4 632206 632499 -183656163 + AluJb SINE Alu 1 295 -17 3678 183 56 67 chr4 632499 633007 -183655655 + Tigger1 DNA MER2_type 502 995 -1423 239 207 49 37 chr4 633007 633089 -183655573 + Tigger1 DNA MER2_type 913 995 -1423 252 207 49 37 chr4 633089 633171 -183655491 + Tigger1 DNA MER2_type 913 995 -1423 2221 65 7 0 chr4 633291 633569 -183655093 + AluY SINE Alu 16 295 -16 1265 147 8 37 chr4 633571 633816 -183654846 + Tigger1 DNA MER2_type 1173 1410 -1008 291 195 26 26 chr4 637556 637633 -183651029 - MER58 DNA MER1_type -2311 109 33 266 272 20 54 chr4 638179 638326 -183650336 + (CACG)n Simple_repeat Simple_repeat 2 143 0 * 477 234 0 65 chr4 638248 638432 -183650230 + (CA)n Simple_repeat Simple_repeat 1 172 0 213 218 0 52 chr4 638493 638694 -183649968 + (CA)n Simple_repeat Simple_repeat 1 190 0 268 232 0 56 chr4 638715 639010 -183649652 + (CA)n Simple_repeat Simple_repeat 1 278 0 474 265 0 49 chr4 639025 639210 -183649452 + (CA)n Simple_repeat Simple_repeat 2 177 0 241 201 13 40 chr4 639221 639370 -183649292 + (CA)n Simple_repeat Simple_repeat 2 146 0 349 241 73 0 chr4 642290 642388 -183646274 - AluJ/FLAM SINE Alu -217 85 1 509 270 128 0 chr4 642388 642592 -183646070 - L1M4 LINE L1 -3119 3027 2798 863 259 64 4 chr4 643143 643409 -183645253 + L1ME1 LINE L1 5566 5847 -319 341 299 51 51 chr4 643409 643594 -183645068 + L1MD2 LINE L1 5973 6135 -224 2088 96 24 10 chr4 643611 643902 -183644760 - AluSp SINE Alu -17 296 2 1667 176 3 37 chr4 644519 644842 -183643820 + AluSx SINE Alu 1 312 0 1712 148 35 0 chr4 644847 645131 -183643531 + AluJo SINE Alu 6 299 -13 4268 176 79 129 chr4 645159 646944 -183641718 - pTR5 LTR ERV1 0 2438 743 2070 113 10 0 chr4 647511 647789 -183640873 + AluSx SINE Alu 1 284 -28 297 0 0 0 chr4 647789 647822 -183640840 + (CA)n Simple_repeat Simple_repeat 2 34 0 2070 113 10 0 chr4 647822 647843 -183640819 + AluSx SINE Alu 284 303 -9 2334 82 3 3 chr4 648920 649226 -183639436 - AluSc SINE Alu -3 306 1 2150 117 0 13 chr4 649232 649548 -183639114 - AluSx SINE Alu 0 312 1 23 0 0 0 chr4 653724 653747 -183634915 + AT_rich Low_complexity Low_complexity 1 23 0 2312 84 0 0 chr4 654874 655170 -183633492 - AluY SINE Alu -15 296 1 442 236 138 11 chr4 656013 656187 -183632475 - L1MC1 LINE L1 -1 6332 6137 1698 223 61 17 chr4 656303 656828 -183631834 - L1MC1 LINE L1 -382 5951 5404 265 347 35 15 chr4 658946 659145 -183629517 + L1MEd LINE L1 1306 1508 -5022 370 310 85 3 chr4 659147 659297 -183629365 + L1MEd LINE L1 1533 1696 -4844 1826 104 4 4 chr4 660344 660612 -183628050 - AluSc SINE Alu -3 306 39 1439 126 0 0 chr4 660712 660919 -183627743 + AluSq SINE Alu 91 297 -16 231 264 58 11 chr4 660931 661018 -183627644 - L1MC1 LINE L1 -2204 3942 3852 327 299 125 69 chr4 661494 662481 -183626181 + L1M2 LINE L1 369 1250 -5599 2135 99 10 6 chr4 665539 665851 -183622811 + AluSq SINE Alu 1 313 0 1006 235 40 99 chr4 665851 666297 -183622365 - Cheshire DNA MER1_type -1584 836 417 264 200 146 0 chr4 666448 666558 -183622104 - Cheshire DNA MER1_type -2216 204 79 448 184 0 0 chr4 666562 666638 -183622024 - AluJ/FLAM SINE Alu -236 76 1 442 241 25 64 chr4 667721 667754 -183620908 + L1MC5 LINE L1 7552 7585 -376 1687 166 44 0 chr4 667754 668049 -183620613 + AluJb SINE Alu 1 308 -4 442 241 25 64 chr4 668049 668218 -183620444 + L1MC5 LINE L1 7585 7746 -215 2215 86 0 35 chr4 668364 668678 -183619984 - AluSg SINE Alu -7 303 1 361 273 81 68 chr4 669176 669337 -183619325 - L1M4 LINE L1 -1575 4571 4409 1527 108 5 0 chr4 669344 669558 -183619104 + AluSg SINE Alu 1 215 -95 296 169 70 14 chr4 669666 669737 -183618925 + L1MD3 LINE L1 7921 7995 0 306 325 6 12 chr4 672880 673043 -183615619 + (CA)n Simple_repeat Simple_repeat 1 162 0 21 0 0 0 chr4 673496 673517 -183615145 + GC_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr4 674725 674755 -183613907 + GC_rich Low_complexity Low_complexity 1 30 0 310 382 94 9 chr4 674861 675094 -183613568 + HAL1 LINE L1 1011 1263 -1244 259 261 125 45 chr4 678367 678543 -183610119 - MLT1C LTR MaLR -269 198 9 21 57 0 0 chr4 679808 679843 -183608819 + GC_rich Low_complexity Low_complexity 1 35 0 2000 112 0 31 chr4 681631 681952 -183606710 + AluY SINE Alu 1 311 0 1370 187 100 2 chr4 681963 682347 -183606315 - MER31A LTR ERV1 -21 445 1 2351 55 3 0 chr4 682855 683147 -183605515 - AluY SINE Alu -18 293 1 512 261 252 13 chr4 683271 683585 -183605077 - L2 LINE L2 -14 3299 2911 538 107 68 10 chr4 685207 685310 -183603352 - MER34B LTR ERV1 -155 410 302 551 224 176 0 chr4 685378 685437 -183603225 + L1MC3 LINE L1 6784 6831 -954 2080 119 3 3 chr4 685437 685739 -183602923 + AluSp SINE Alu 1 302 -11 551 224 176 0 chr4 685739 685889 -183602773 + L1MC3 LINE L1 6831 7030 -755 352 133 42 0 chr4 685889 685972 -183602690 + FRAM/FAM SINE Alu 21 84 -91 335 285 60 98 chr4 686084 686319 -183602343 - L1MEc LINE L1 -3810 2572 2347 235 291 0 13 chr4 686515 686594 -183602068 + (TG)n Simple_repeat Simple_repeat 1 78 0 451 305 110 54 chr4 686752 687455 -183601207 - L1MEc LINE L1 -4638 1895 999 1779 119 8 0 chr4 688093 688345 -183600317 + AluSx SINE Alu 40 293 -19 180 233 50 67 chr4 688579 688639 -183600023 + L2 LINE L2 3204 3262 -10 309 292 62 10 chr4 690261 690357 -183598305 - L1MCa LINE L1 -3102 3324 3224 211 200 0 0 chr4 690361 690396 -183598266 + (TATG)n Simple_repeat Simple_repeat 2 36 0 1103 258 36 32 chr4 690428 690502 -183598160 - L1MCa LINE L1 -3212 3214 3142 1600 114 0 5 chr4 690502 690722 -183597940 + AluSg SINE Alu 1 219 -91 1103 258 36 32 chr4 690722 691116 -183597546 - L1MCa LINE L1 -3284 3142 2744 340 315 152 16 chr4 691330 691587 -183597075 + MLT1E LTR MaLR 301 592 -1 515 327 97 4 chr4 691600 691878 -183596784 - L1MCa LINE L1 -4002 2605 2302 402 304 57 53 chr4 691911 692174 -183596488 - L1MCa LINE L1 -4837 1591 1275 846 99 0 0 chr4 697687 697798 -183590864 + AluSp SINE Alu 1 111 -202 1592 130 53 37 chr4 698156 698455 -183590207 - AluJo SINE Alu -8 304 1 266 195 134 12 chr4 698582 698664 -183589998 + MER68 LTR ERV1 60 151 -411 502 265 0 32 chr4 699400 699585 -183589077 + (CA)n Simple_repeat Simple_repeat 1 179 0 * 510 318 11 19 chr4 699537 699965 -183588697 + (CACG)n Simple_repeat Simple_repeat 1 424 0 416 326 0 27 chr4 699946 700130 -183588532 + (CA)n Simple_repeat Simple_repeat 1 179 0 * 339 365 0 0 chr4 700207 700385 -183588277 + (CA)n Simple_repeat Simple_repeat 1 178 0 320 234 124 29 chr4 702450 702587 -183586075 + MER77 LTR ERV1 62 211 -394 418 293 55 0 chr4 702609 702790 -183585872 + MER77 LTR ERV1 407 597 -8 1982 112 3 39 chr4 703340 703652 -183585010 - AluSx SINE Alu -9 303 3 711 133 0 0 chr4 703654 703759 -183584903 - AluSg/x SINE Alu -8 301 197 2159 79 7 0 chr4 707094 707411 -183581251 + AluSg SINE Alu 1 319 0 1768 136 3 29 chr4 708373 708681 -183579981 + AluJo SINE Alu 1 300 -12 207 315 0 0 chr4 708704 708758 -183579904 + GA-rich Low_complexity Low_complexity 6 59 0 331 202 20 50 chr4 709968 710067 -183578595 + L1MC2 LINE L1 6240 6335 -9 1964 84 0 15 chr4 710072 710335 -183578327 + AluSc SINE Alu 15 273 -36 2313 75 0 3 chr4 710973 711268 -183577394 + AluSx SINE Alu 1 294 -18 256 262 0 16 chr4 713193 713254 -183575408 + GA-rich Low_complexity Low_complexity 3 62 0 2144 102 3 7 chr4 714350 714654 -183574008 + AluSx SINE Alu 1 303 -9 1537 167 30 13 chr4 714722 715021 -183573641 + AluJb SINE Alu 3 306 -6 329 313 123 20 chr4 715205 715400 -183573262 + L1ME1 LINE L1 5263 5477 -882 2491 147 159 16 chr4 717200 717746 -183570916 + MER51A LTR ERV1 2 625 -9 467 213 48 69 chr4 717830 718182 -183570480 + (CACGC)n Simple_repeat Simple_repeat 1 344 0 789 174 8 0 chr4 720780 720912 -183567750 + AluJo SINE Alu 3 135 -177 1399 181 72 22 chr4 720912 721189 -183567473 + AluJo SINE Alu 1 291 -21 1721 91 0 29 chr4 721301 721543 -183567119 - AluSq SINE Alu -78 235 1 212 296 0 34 chr4 726707 726883 -183561779 + (CA)n Simple_repeat Simple_repeat 1 170 0 429 309 85 15 chr4 727630 727907 -183560755 + L1ME1 LINE L1 3138 3779 -2367 1179 293 20 8 chr4 728004 728396 -183560266 + L1ME1 LINE L1 3944 4340 -1806 1728 240 88 11 chr4 728400 728600 -183560062 + L1ME1 LINE L1 5075 5258 -908 1528 141 148 0 chr4 728600 728856 -183559806 - AluJb SINE Alu -6 296 3 1728 240 88 11 chr4 728856 729469 -183559193 + L1ME1 LINE L1 5258 5943 -223 230 328 25 42 chr4 729817 730058 -183558604 + L1ME1 LINE L1 5841 6077 -89 26 0 0 0 chr4 730141 730167 -183558495 + AT_rich Low_complexity Low_complexity 1 26 0 1083 252 232 2 chr4 730229 730773 -183557889 + L1MD1 LINE L1 3527 4195 -1951 450 186 0 21 chr4 730779 730876 -183557786 + L1MA8 LINE L1 6026 6120 -171 483 221 31 0 chr4 730881 731008 -183557654 + L1MA8 LINE L1 6157 6287 -4 570 315 89 33 chr4 731729 732198 -183556464 + L2 LINE L2 2776 3279 -34 909 144 14 14 chr4 732218 732364 -183556298 + FRAM SINE Alu 13 158 -18 2193 87 10 16 chr4 732370 732679 -183555983 + AluY SINE Alu 5 311 0 2397 66 0 3 chr4 732912 733214 -183555448 - AluSc SINE Alu -8 301 1 793 217 120 77 chr4 733338 733467 -183555195 + L1MD1 LINE L1 4725 4847 -1395 2187 100 30 0 chr4 733467 733766 -183554896 - AluSx SINE Alu -4 308 1 793 217 120 77 chr4 733766 734408 -183554254 + L1MD1 LINE L1 4847 5520 -722 921 221 142 40 chr4 734411 734605 -183554057 + MLT1B LTR MaLR 1 174 -216 2245 103 0 0 chr4 734605 734907 -183553755 + AluSx SINE Alu 1 302 -10 921 221 142 40 chr4 734907 735065 -183553597 + MLT1B LTR MaLR 174 389 -1 1207 210 73 6 chr4 735066 735380 -183553282 + L1MD1 LINE L1 5527 5861 -381 416 263 226 29 chr4 735381 735655 -183553007 + L1MD1 LINE L1 5915 6242 0 1875 141 0 21 chr4 735759 736049 -183552613 + AluJo SINE Alu 1 284 -28 22 0 0 0 chr4 736194 736216 -183552446 + AT_rich Low_complexity Low_complexity 1 22 0 1192 217 25 39 chr4 736251 736275 -183552387 + L1ME LINE L1 5369 5392 -772 2019 108 30 3 chr4 736275 736570 -183552092 + AluSx SINE Alu 1 303 -9 1192 217 25 39 chr4 736570 736905 -183551757 + L1ME LINE L1 5392 5723 -441 607 185 15 11 chr4 736969 737105 -183551557 + MSTA LTR MaLR 3 141 -234 229 245 0 0 chr4 737272 737325 -183551337 + MSTA LTR MaLR 129 181 -247 456 219 0 0 chr4 737362 737458 -183551204 + AluSg/x SINE Alu 209 304 -6 1338 158 113 34 chr4 737934 738262 -183550400 + MLT1A1 LTR MaLR 12 365 0 483 352 82 9 chr4 738754 738987 -183549675 + MIR SINE MIR 4 253 -9 221 212 0 30 chr4 739188 739254 -183549408 + (CCGCT)n Simple_repeat Simple_repeat 4 67 0 2203 104 3 0 chr4 739516 739805 -183548857 - AluSx SINE Alu -22 290 1 779 191 19 13 chr4 739831 739988 -183548674 + FRAM SINE Alu 1 158 -18 2280 97 7 0 chr4 740200 740509 -183548153 - AluSp SINE Alu -2 311 1 600 195 55 16 chr4 741020 741148 -183547514 + FLAM_A SINE Alu 1 133 0 770 206 41 85 chr4 741223 741539 -183547123 + MER46C DNA MER2_type 20 321 -17 427 284 147 47 chr4 744636 744666 -183543996 + MER102b DNA MER1_type 86 112 -1316 1895 59 134 0 chr4 744666 744943 -183543719 + AluSq SINE Alu 2 312 0 427 284 147 47 chr4 744943 745141 -183543521 + MER102b DNA MER1_type 112 340 -1 257 114 286 0 chr4 745252 745322 -183543340 + LTR54 LTR ERV1 391 480 -30 801 339 120 48 chr4 745564 746500 -183542162 - L2 LINE L2 -1010 2304 1302 1677 201 143 55 chr4 746796 747507 -183541155 + L1MC2 LINE L1 2320 3086 -3060 1340 123 0 47 chr4 747527 747738 -183540924 + AluSx SINE Alu 35 235 -77 3631 201 91 136 chr4 747760 748114 -183540548 + L1MC2 LINE L1 3073 3441 -2705 2136 107 0 10 chr4 748114 748413 -183540249 + AluSc SINE Alu 1 296 -13 3631 201 91 136 chr4 748413 748503 -183540159 + L1MC2 LINE L1 3441 3534 -2612 835 79 44 0 chr4 748503 748617 -183540045 + L1MA2 LINE L1 6186 6304 0 3631 201 91 136 chr4 748617 748722 -183539940 + L1MC2 LINE L1 3534 3642 -2504 2085 132 3 0 chr4 748722 749017 -183539645 + AluSq SINE Alu 1 296 -17 3631 201 91 136 chr4 749017 749662 -183539000 + L1MC2 LINE L1 3642 4315 -1831 2271 106 0 0 chr4 749662 749963 -183538699 + AluSx SINE Alu 1 301 -11 3631 201 91 136 chr4 749963 750456 -183538206 + L1MC2 LINE L1 4315 4765 -1381 561 204 0 0 chr4 750456 750554 -183538108 + FLAM_A SINE Alu 1 98 -44 3631 201 91 136 chr4 750554 750737 -183537925 + L1MC2 LINE L1 4765 4955 -1191 1137 67 0 0 chr4 750739 750874 -183537788 + AluSp SINE Alu 1 135 -178 2290 106 0 0 chr4 750874 751175 -183537487 + AluSx SINE Alu 1 301 -11 501 235 137 0 chr4 751180 751363 -183537299 + L1MC2 LINE L1 4958 5165 -981 2160 176 46 18 chr4 751395 751607 -183537055 + L1MC2 LINE L1 5753 5958 -386 2263 96 3 0 chr4 751607 751909 -183536753 + AluSq SINE Alu 1 303 -10 2160 176 46 18 chr4 751909 752166 -183536496 + L1MC2 LINE L1 5958 6240 -104 2267 89 0 0 chr4 752166 752490 -183536172 + AluSg SINE Alu 1 324 0 2160 176 46 18 chr4 752490 752518 -183536144 + L1MC2 LINE L1 6240 6266 -78 2210 101 7 3 chr4 752536 752833 -183535829 + AluSq SINE Alu 1 298 -15 441 204 0 0 chr4 755300 755437 -183533225 + (TG)n Simple_repeat Simple_repeat 1 137 0 219 177 0 0 chr4 755465 755527 -183533135 + (TG)n Simple_repeat Simple_repeat 2 63 0 243 0 0 0 chr4 756389 756416 -183532246 + (TG)n Simple_repeat Simple_repeat 1 27 0 252 200 0 0 chr4 756458 756518 -183532144 + (CA)n Simple_repeat Simple_repeat 1 60 0 305 360 81 37 chr4 756943 757315 -183531347 + L1MDa LINE L1 1271 1610 -1291 34 42 0 0 chr4 757319 757367 -183531295 + GC_rich Low_complexity Low_complexity 1 48 0 201 121 0 0 chr4 757745 757778 -183530884 + (CTG)n Simple_repeat Simple_repeat 1 33 0 21 0 0 0 chr4 757786 757807 -183530855 + GC_rich Low_complexity Low_complexity 1 21 0 195 235 0 0 chr4 760008 760059 -183528603 + G-rich Low_complexity Low_complexity 2 52 0 241 324 20 10 chr4 760372 760474 -183528188 + (CGTG)n Simple_repeat Simple_repeat 1 103 0 228 335 0 58 chr4 760427 760615 -183528047 + (TG)n Simple_repeat Simple_repeat 2 178 0 * 211 366 0 17 chr4 760737 760909 -183527753 + (TG)n Simple_repeat Simple_repeat 1 169 0 183 42 0 0 chr4 760960 760984 -183527678 + (TG)n Simple_repeat Simple_repeat 2 25 0 264 120 0 0 chr4 761177 761227 -183527435 + (TG)n Simple_repeat Simple_repeat 2 51 0 2125 77 42 0 chr4 763347 763632 -183525030 - AluSx SINE Alu -13 299 3 256 178 27 0 chr4 765139 765212 -183523450 + (TG)n Simple_repeat Simple_repeat 2 76 0 253 83 0 0 chr4 769570 769618 -183519044 - L1PA2 LINE L1 0 6155 6108 200 187 0 13 chr4 770676 770751 -183517911 + (CGGG)n Simple_repeat Simple_repeat 3 76 0 22 35 0 0 chr4 774771 774800 -183513862 + GC_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr4 774908 774931 -183513731 + GC_rich Low_complexity Low_complexity 1 23 0 297 0 0 0 chr4 776621 776654 -183512008 + (TCTCCC)n Simple_repeat Simple_repeat 5 37 0 6715 48 2 154 chr4 776660 777838 -183510824 + SVA Other Other 50 1047 -339 471 266 21 7 chr4 777980 778123 -183510539 - MLT1A2 LTR MaLR 0 374 230 1096 228 87 3 chr4 778167 778513 -183510149 + MLT1C LTR MaLR 3 377 -90 296 373 32 0 chr4 778503 778629 -183510033 + MER82 DNA MER2_type 516 645 -8 * 928 81 0 0 chr4 778991 779114 -183509548 - AluSp/q SINE Alu -16 297 175 217 230 13 0 chr4 779226 779378 -183509284 + (CA)n Simple_repeat Simple_repeat 2 155 0 202 217 0 17 chr4 779391 779451 -183509211 + (CCCA)n Simple_repeat Simple_repeat 3 61 0 316 195 20 23 chr4 779453 779712 -183508950 + (CA)n Simple_repeat Simple_repeat 1 258 0 364 266 12 0 chr4 779731 779900 -183508762 + (CA)n Simple_repeat Simple_repeat 2 172 0 236 284 15 0 chr4 783605 783672 -183504990 + MIR SINE MIR 82 149 -59 2266 87 3 3 chr4 784538 784838 -183503824 + AluSg SINE Alu 1 300 -10 252 255 0 32 chr4 785876 785970 -183502692 + C-rich Low_complexity Low_complexity 1 91 0 736 153 0 0 chr4 791345 791456 -183497206 + FLAM_C SINE Alu 1 111 -32 1350 118 24 0 chr4 791462 791673 -183496989 - AluY SINE Alu -12 299 84 278 125 0 0 chr4 791674 791714 -183496948 - AluY SINE Alu -52 249 210 183 333 0 0 chr4 792253 792298 -183496364 + L2 LINE L2 3225 3269 -3 2050 125 0 7 chr4 798511 798814 -183489848 - AluJb SINE Alu -11 301 1 1718 234 96 71 chr4 799178 799332 -183489330 - L1ME1 LINE L1 -75 6091 5942 2040 114 7 0 chr4 799332 799622 -183489040 - AluSx SINE Alu -20 292 1 1718 234 96 71 chr4 799622 800081 -183488581 - L1ME1 LINE L1 -224 5942 5449 2202 114 0 0 chr4 800081 800387 -183488275 + AluSx SINE Alu 1 306 -6 1718 234 96 71 chr4 800387 800693 -183487969 - L1ME1 LINE L1 -717 5449 5152 2304 110 0 0 chr4 800693 801001 -183487661 + AluSx SINE Alu 1 308 -4 1454 193 72 34 chr4 801004 801268 -183487394 + L1ME LINE L1 4664 4951 -1195 2225 93 0 26 chr4 801268 801578 -183487084 + AluSc SINE Alu 1 302 -7 1454 193 72 34 chr4 801578 801727 -183486935 + L1ME LINE L1 4951 5093 -1053 615 137 154 17 chr4 801728 801845 -183486817 - FLAM_C SINE Alu 0 133 1 2009 119 11 0 chr4 801897 802183 -183486479 + AluSx SINE Alu 1 289 -23 524 299 60 9 chr4 803546 803763 -183484899 + L1ME LINE L1 5359 5586 -578 536 15 0 0 chr4 803763 803828 -183484834 - AluY SINE Alu -10 300 236 22 35 0 0 chr4 804112 804141 -183484521 + GC_rich Low_complexity Low_complexity 1 29 0 403 306 177 23 chr4 806575 806875 -183481787 - L2 LINE L2 -254 3059 2806 2093 67 0 4 chr4 806875 807143 -183481519 - AluY SINE Alu -3 308 42 403 306 177 23 chr4 807143 807379 -183481283 - L2 LINE L2 -507 2806 2421 261 266 6 51 chr4 808660 808818 -183479844 + G-rich Low_complexity Low_complexity 5 155 0 633 175 79 16 chr4 810732 810759 -183477903 - AluJo/FRAM SINE Alu -14 298 274 2365 74 3 0 chr4 810759 811056 -183477606 + AluSg SINE Alu 1 298 -12 633 175 79 16 chr4 811056 811154 -183477508 - AluJo/FRAM SINE Alu -38 274 165 948 178 12 0 chr4 811166 811335 -183477327 - AluJo SINE Alu -21 291 121 2053 102 3 22 chr4 811364 811678 -183476984 + AluSc SINE Alu 1 308 -1 582 279 177 42 chr4 811679 811715 -183476947 - MER69 DNA AcHobo -64 2462 2432 2049 116 3 7 chr4 811715 812016 -183476646 + AluSx SINE Alu 1 300 -12 2350 84 0 3 chr4 812016 812327 -183476335 + AluSg SINE Alu 1 310 0 582 279 177 42 chr4 812327 812877 -183475785 - MER69 DNA AcHobo -93 2433 1796 357 227 84 17 chr4 813308 813427 -183475235 - MER74B LTR ERVL 0 622 496 259 194 65 0 chr4 813652 813714 -183474948 - MER74B LTR ERVL -483 139 74 2397 76 0 0 chr4 813714 814015 -183474647 + AluSq SINE Alu 1 301 -12 340 169 26 13 chr4 814170 814247 -183474415 + MER107 DNA MER1_type 71 148 -49 439 336 38 15 chr4 814318 814583 -183474079 + HERVL74 LTR ERVL 1671 1941 -3744 383 123 0 0 chr4 814660 814725 -183473937 + HERVL74 LTR ERVL 2096 2160 -3525 1511 164 17 40 chr4 814740 814882 -183473780 + AluJb SINE Alu 1 145 -167 180 0 0 0 chr4 814882 814902 -183473760 + (CAAT)n Simple_repeat Simple_repeat 1 20 0 1511 164 17 40 chr4 814902 815057 -183473605 + AluJb SINE Alu 145 291 -21 2410 218 60 35 chr4 815060 815227 -183473435 + HERVL74 LTR ERVL 2241 2402 -3283 2332 73 0 13 chr4 815227 815529 -183473133 - AluY SINE Alu -13 298 1 2410 218 60 35 chr4 815529 816165 -183472497 + HERVL74 LTR ERVL 2402 3064 -2621 362 291 52 23 chr4 816250 816422 -183472240 - MLT1D LTR MaLR -264 241 65 1576 216 138 12 chr4 816618 817157 -183471505 + MER39B LTR ERV1 1 649 -4 2305 100 0 0 chr4 817235 817534 -183471128 - AluSx SINE Alu -13 299 1 225 228 0 13 chr4 817567 817646 -183471016 - L1MB8 LINE L1 -4 6174 6097 534 250 83 74 chr4 817668 817964 -183470698 - L1MD3 LINE L1 0 8042 7770 1851 119 93 0 chr4 817964 818242 -183470420 + AluSx SINE Alu 7 310 -2 534 250 83 74 chr4 818242 818370 -183470292 - L1MD3 LINE L1 -272 7770 7645 333 314 32 16 chr4 818899 819023 -183469639 - L1ME LINE L1 -5932 138 13 1440 224 13 19 chr4 819323 819631 -183469031 - AluJo SINE Alu -6 306 1 1150 142 29 0 chr4 819705 819909 -183468753 + MER2 DNA MER2_type 1 210 -135 242 172 52 0 chr4 819948 820006 -183468656 + MER2 DNA MER2_type 280 340 -5 821 183 0 0 chr4 820054 820196 -183468466 + AluSg/x SINE Alu 169 310 0 381 329 17 69 chr4 823340 823422 -183465240 + L1ME1 LINE L1 5776 5861 -305 1636 170 47 55 chr4 823422 823786 -183464876 - THE1B LTR MaLR 0 364 4 381 329 17 69 chr4 823786 823934 -183464728 + L1ME1 LINE L1 5861 5994 -172 1433 140 131 44 chr4 825169 825470 -183463192 + THE1C LTR MaLR 1 274 -101 2260 70 3 26 chr4 825470 825772 -183462890 - AluY SINE Alu -16 295 1 243 0 0 0 chr4 825772 825799 -183462863 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1967 105 3 47 chr4 825799 826095 -183462567 - AluSg SINE Alu -27 283 1 1433 140 131 44 chr4 826095 826134 -183462528 + THE1C LTR MaLR 273 373 -2 324 237 144 17 chr4 826434 826485 -183462177 + L1MEc LINE L1 55 98 -6298 2081 124 0 3 chr4 826485 826783 -183461879 - AluSx SINE Alu -15 297 1 324 237 144 17 chr4 826783 826849 -183461813 + L1MEc LINE L1 98 187 -6209 3228 260 81 76 chr4 827089 827209 -183461453 + L1MEc LINE L1 1732 1850 -4365 1703 152 27 14 chr4 827209 827506 -183461156 + AluJo SINE Alu 12 312 0 3228 260 81 76 chr4 827506 828103 -183460559 + L1MEc LINE L1 1850 2443 -3772 2472 71 0 0 chr4 828103 828413 -183460249 + AluY SINE Alu 1 310 -1 3228 260 81 76 chr4 828413 829927 -183458735 + L1MEc LINE L1 2443 3949 -2266 1694 190 88 41 chr4 829927 830338 -183458324 + MSTB1 LTR MaLR 2 431 -1 2087 116 3 3 chr4 830346 830640 -183458022 + AluSq SINE Alu 1 294 -19 3228 260 81 76 chr4 830640 831226 -183457436 + L1MEc LINE L1 3955 4569 -1646 2120 99 7 0 chr4 831226 831518 -183457144 - AluSx SINE Alu -18 294 1 3228 260 81 76 chr4 831518 832000 -183456662 + L1MEc LINE L1 4569 5047 -1168 779 306 65 44 chr4 833253 833737 -183454925 - L1MB7 LINE L1 -9 6165 5676 260 267 13 20 chr4 836226 836376 -183452286 + CT-rich Low_complexity Low_complexity 2 150 0 318 366 57 60 chr4 841422 841687 -183446975 + HAL1 LINE L1 1013 1276 -1231 28 29 0 0 chr4 844287 844322 -183444340 + AT_rich Low_complexity Low_complexity 1 35 0 2274 56 3 11 chr4 845642 845928 -183442734 - AluY SINE Alu -27 284 1 2222 105 0 0 chr4 845928 846222 -183442440 - AluSg SINE Alu -16 294 1 819 234 148 10 chr4 846225 846411 -183442251 - L1MEc LINE L1 -4347 2049 1890 1787 117 0 0 chr4 846411 846658 -183442004 + AluSx SINE Alu 48 294 -18 819 234 148 10 chr4 846658 846761 -183441901 - L1MEc LINE L1 -4506 1890 1720 621 269 72 46 chr4 846814 846984 -183441678 - L1MEc LINE L1 -5107 1289 1125 2192 104 0 0 chr4 846984 847273 -183441389 - AluSx SINE Alu -23 289 1 621 269 72 46 chr4 847273 847492 -183441170 - L1MEc LINE L1 -5271 1125 890 1503 268 84 37 chr4 847629 847723 -183440939 - L1MEc LINE L1 -5424 972 884 1572 131 0 4 chr4 847723 847952 -183440710 - AluSq SINE Alu -85 228 1 1503 268 84 37 chr4 847952 848162 -183440500 - L1MEc LINE L1 -5512 884 685 1641 181 7 0 chr4 848162 848450 -183440212 - AluJb SINE Alu -22 290 1 1503 268 84 37 chr4 848450 848846 -183439816 - L1MEc LINE L1 -5711 685 238 318 302 52 0 chr4 851389 851505 -183437157 + MLT1A1 LTR MaLR 19 140 -225 262 288 55 0 chr4 852337 852500 -183436162 + (GTGTG)n Simple_repeat Simple_repeat 5 176 0 396 0 0 0 chr4 853986 854030 -183434632 + (TG)n Simple_repeat Simple_repeat 1 44 0 261 0 0 0 chr4 854075 854104 -183434558 + (TG)n Simple_repeat Simple_repeat 2 30 0 279 0 0 0 chr4 854140 854171 -183434491 + (TG)n Simple_repeat Simple_repeat 2 32 0 186 43 0 0 chr4 854209 854232 -183434430 + (TG)n Simple_repeat Simple_repeat 2 24 0 260 89 0 22 chr4 854266 854311 -183434351 + (TG)n Simple_repeat Simple_repeat 1 44 0 1832 173 7 0 chr4 855185 855486 -183433176 - AluJb SINE Alu -4 308 6 2198 105 20 0 chr4 855490 855794 -183432868 - AluSg SINE Alu 0 310 1 997 227 95 36 chr4 856087 856479 -183432183 - L1M3 LINE L1 -465 5715 5285 477 193 0 11 chr4 856502 856590 -183432072 - AluSg/x SINE Alu -26 284 198 433 211 13 0 chr4 856589 856665 -183431997 - AluJo SINE Alu -151 161 85 * 890 73 0 0 chr4 856766 856876 -183431786 - AluSq/x SINE Alu -203 110 1 200 328 160 0 chr4 863694 863813 -183424849 + MIR SINE MIR 68 205 -57 206 322 0 0 chr4 867050 867140 -183421522 + C-rich Low_complexity Low_complexity 1 90 0 2411 50 3 10 chr4 868478 868776 -183419886 - AluY SINE Alu -15 296 1 229 282 91 9 chr4 869380 869490 -183419172 - L1MD1 LINE L1 -1 6241 6123 1870 152 50 19 chr4 873574 873937 -183414725 - THE1C LTR MaLR -1 374 1 1485 112 0 5 chr4 874762 874968 -183413694 - AluSg/x SINE Alu -21 291 87 361 83 0 0 chr4 876474 876522 -183412140 + THE1C LTR MaLR 1 48 -327 2376 111 42 11 chr4 876544 876897 -183411765 + THE1B LTR MaLR 1 364 0 273 358 57 0 chr4 877494 877617 -183411045 + Tigger8 DNA MER2_type 170 299 -367 258 181 96 12 chr4 877710 877793 -183410869 + Tigger8 DNA MER2_type 434 523 -143 786 239 84 47 chr4 882272 882485 -183406177 + MER58A DNA MER1_type 1 221 -3 2143 88 14 3 chr4 882597 882894 -183405768 + AluSp SINE Alu 1 300 -13 543 222 50 14 chr4 884193 884349 -183404313 + MER74A LTR ERVL 23 239 -383 263 258 82 21 chr4 884442 884539 -183404123 + MER74B LTR ERVL 512 614 -8 2307 77 10 16 chr4 884627 884939 -183403723 + AluSp SINE Alu 1 310 -3 301 261 91 0 chr4 885800 885888 -183402774 + L1M4 LINE L1 69 164 -6695 341 197 13 0 chr4 885958 886034 -183402628 + L1P LINE L1 3714 3790 -2356 466 285 100 43 chr4 886464 886917 -183401745 + L1M4 LINE L1 1282 1728 -5219 * 3734 215 23 85 chr4 886902 888148 -183400514 + L1M4 LINE L1 4410 5578 -1379 421 205 49 8 chr4 888118 888240 -183400422 + L1MC1 LINE L1 2003 2129 -4830 * 2104 95 54 0 chr4 888243 888539 -183400123 + AluSx SINE Alu 1 312 0 1011 150 24 0 chr4 888539 888706 -183399956 + AluJb SINE Alu 134 304 -8 324 249 89 35 chr4 888718 888887 -183399775 + L1MC1 LINE L1 2273 2450 -4688 413 295 59 56 chr4 888890 889229 -183399433 + L1MC1 LINE L1 2528 2867 -4271 862 164 96 82 chr4 889229 889448 -183399214 - MLT1A2 LTR MaLR 0 374 153 3012 199 38 9 chr4 889467 890124 -183398538 - L1MB3 LINE L1 -30 6153 5478 1389 150 86 29 chr4 890286 890566 -183398096 - AluJb SINE Alu -16 296 1 820 133 55 0 chr4 890566 890694 -183397968 - AluSq/x SINE Alu -178 135 1 863 157 21 0 chr4 890696 890836 -183397826 - FRAM SINE Alu -17 159 17 1731 188 65 82 chr4 890849 890904 -183397758 - L1MB3 LINE L1 -697 5474 5420 771 197 0 0 chr4 890904 891036 -183397626 - FLAM_A SINE Alu -1 132 1 1731 188 65 82 chr4 891036 891148 -183397514 - L1MB3 LINE L1 -751 5420 5308 1704 173 3 10 chr4 891148 891443 -183397219 - AluJb SINE Alu -17 295 3 1731 188 65 82 chr4 891443 891890 -183396772 - L1MB3 LINE L1 -863 5308 4873 553 163 206 0 chr4 891908 892049 -183396613 - MLT1A2 LTR MaLR -220 170 1 671 242 55 19 chr4 892061 892351 -183396311 + L1MC1 LINE L1 2835 3133 -3824 * 1147 246 55 25 chr4 892342 892397 -183396265 + L1MC1 LINE L1 5162 5214 -1743 2026 124 3 13 chr4 892397 892704 -183395958 + AluSx SINE Alu 1 304 -8 1147 246 55 25 chr4 892704 893082 -183395580 + L1MC1 LINE L1 5214 5608 -1349 300 340 123 0 chr4 893100 893262 -183395400 - L1MEc LINE L1 -4016 2201 2020 757 292 79 17 chr4 893296 893649 -183395013 - L1MEc LINE L1 -4432 1964 1590 651 270 77 123 chr4 893672 893740 -183394922 + L1MC4 LINE L1 6885 6955 -853 1976 143 0 10 chr4 893740 894040 -183394622 + AluSx SINE Alu 1 297 -15 651 270 77 123 chr4 894040 894752 -183393910 + L1MC4 LINE L1 6955 7629 -179 457 254 71 56 chr4 895558 895755 -183392907 + L1MC4 LINE L1 7841 8040 -2 30 27 0 0 chr4 895827 895864 -183392798 + AT_rich Low_complexity Low_complexity 1 37 0 27 49 0 0 chr4 895903 895944 -183392718 + AT_rich Low_complexity Low_complexity 1 41 0 21 0 0 0 chr4 895983 896004 -183392658 + AT_rich Low_complexity Low_complexity 1 21 0 25 31 0 0 chr4 896051 896083 -183392579 + AT_rich Low_complexity Low_complexity 1 32 0 5873 143 45 22 chr4 896221 897398 -183391264 + L1MC1 LINE L1 5963 7144 0 195 346 28 60 chr4 898589 898771 -183389891 + L2 LINE L2 3133 3308 -5 191 267 67 0 chr4 899767 899842 -183388820 + L2 LINE L2 1705 1784 -1530 455 214 23 110 chr4 900018 900082 -183388580 + LTR37A LTR ERV1 260 328 -98 1961 178 103 0 chr4 900082 900470 -183388192 - MSTA LTR MaLR 0 428 1 455 214 23 110 chr4 900470 900497 -183388165 + LTR37A LTR ERV1 328 356 -70 1500 162 58 7 chr4 900497 900775 -183387887 - AluJo SINE Alu -20 292 1 455 214 23 110 chr4 900775 900855 -183387807 + LTR37A LTR ERV1 356 417 -9 888 193 119 30 chr4 901578 901780 -183386882 + MER58A DNA MER1_type 1 220 -4 1986 101 0 7 chr4 901783 902086 -183386576 + AluSg SINE Alu 23 310 0 920 123 0 0 chr4 902203 902333 -183386329 - FLAM_C SINE Alu 0 143 14 222 309 73 0 chr4 902897 902965 -183385697 + MIR SINE MIR 156 228 -34 417 281 10 0 chr4 905021 905117 -183383545 - MLT1K LTR MaLR -264 324 228 2528 196 38 108 chr4 905118 905971 -183382691 - MER54B LTR ERVL 0 793 1 417 162 40 0 chr4 905972 906046 -183382616 - MLT1K LTR MaLR -358 230 154 759 235 0 47 chr4 906783 906953 -183381709 + FRAM SINE Alu 1 162 -4 208 139 0 28 chr4 906956 906992 -183381670 + (GGAAA)n Simple_repeat Simple_repeat 1 35 0 294 373 83 0 chr4 907425 907618 -183381044 + L2 LINE L2 3094 3302 -11 2111 86 18 0 chr4 908174 908489 -183380173 + AluSx SINE Alu 1 320 0 316 326 31 23 chr4 908626 908755 -183379907 + L1MEc LINE L1 1277 1406 -4990 2190 105 3 10 chr4 908759 909064 -183379598 - AluSp SINE Alu -10 303 1 350 228 13 0 chr4 909114 909193 -183379469 - MER58 DNA MER1_type -1 2419 2340 1915 142 13 3 chr4 909261 909564 -183379098 + AluJb SINE Alu 1 306 -6 441 225 6 66 chr4 911418 911661 -183377001 + G-rich Low_complexity Low_complexity 1 228 0 288 0 0 0 chr4 911686 911718 -183376944 + (TAA)n Simple_repeat Simple_repeat 3 34 0 621 105 175 18 chr4 911764 911878 -183376784 + FLAM_C SINE Alu 1 132 -1 342 265 11 54 chr4 911997 912182 -183376480 + G-rich Low_complexity Low_complexity 4 180 0 1908 124 90 37 chr4 912341 912695 -183375967 + THE1C LTR MaLR 1 373 -2 9807 132 24 40 chr4 912699 914303 -183374359 + THE1C-int LTR MaLR 3 1580 0 1906 131 81 36 chr4 914303 914662 -183374000 + THE1C LTR MaLR 1 375 0 201 304 25 13 chr4 914666 914745 -183373917 + (CGGGA)n Simple_repeat Simple_repeat 4 83 0 * 263 286 40 34 chr4 914692 914867 -183373795 + (GGATG)n Simple_repeat Simple_repeat 4 179 0 963 161 11 5 chr4 917874 918060 -183370602 - Charlie1 DNA MER1_type -4 2757 2571 393 235 49 49 chr4 919556 919739 -183368923 + L1ME3A LINE L1 5096 5278 -868 2204 71 0 4 chr4 922010 922277 -183366385 + AluY SINE Alu 1 266 -45 2238 100 0 17 chr4 922485 922786 -183365876 + AluSx SINE Alu 17 312 0 216 345 56 39 chr4 923288 923520 -183365142 + MIR SINE MIR 8 243 -19 471 350 90 8 chr4 923847 924113 -183364549 + L1MEc LINE L1 1529 1816 -4580 2084 133 7 3 chr4 925085 925386 -183363276 - AluSx SINE Alu -10 302 1 1078 267 39 27 chr4 925771 925915 -183362747 + L1MEc LINE L1 2685 2826 -3389 2947 92 54 7 chr4 925915 926339 -183362323 + MLT2A1 LTR ERVL 1 444 0 1078 267 39 27 chr4 926339 926606 -183362056 + L1MEc LINE L1 2826 3101 -3114 421 67 0 0 chr4 926614 926674 -183361988 + L1P3 LINE L1 5723 5782 -372 1156 37 0 15 chr4 926678 926812 -183361850 + AluYb8 SINE Alu 1 132 -186 1352 316 38 15 chr4 926876 927688 -183360974 + L1MEc LINE L1 3365 4195 -2020 1060 142 111 0 chr4 928007 928197 -183360465 - AluJb SINE Alu -22 290 80 1121 105 26 0 chr4 928273 928426 -183360236 - AluSg/x SINE Alu -19 291 135 506 209 147 0 chr4 928427 928604 -183360058 - Charlie5 DNA MER1_type -60 2552 2350 205 297 120 47 chr4 929698 929890 -183358772 + L2 LINE L2 2155 2360 -954 807 252 13 4 chr4 930171 930401 -183358261 + L1ME3A LINE L1 5624 5855 -315 1145 223 21 7 chr4 930407 930690 -183357972 + AluSx SINE Alu 26 312 0 371 277 8 54 chr4 931174 931411 -183357251 + C-rich Low_complexity Low_complexity 1 226 0 216 344 0 27 chr4 931427 931610 -183357052 + C-rich Low_complexity Low_complexity 1 178 0 185 0 0 39 chr4 931646 931672 -183356990 + (CCCCCT)n Simple_repeat Simple_repeat 1 25 0 346 190 235 23 chr4 935150 935328 -183353334 - MLT1J1 LTR MaLR -249 201 3 211 283 43 22 chr4 936118 936210 -183352452 - L2 LINE L2 -120 3193 3100 223 296 92 7 chr4 936504 936646 -183352016 - L2 LINE L2 -285 3028 2875 369 0 0 0 chr4 936946 936987 -183351675 + (CA)n Simple_repeat Simple_repeat 2 42 0 539 321 117 20 chr4 937007 937380 -183351282 + L1ME LINE L1 2676 3088 -3058 324 324 36 21 chr4 937486 937693 -183350969 + L1ME LINE L1 5564 5773 -348 2301 95 0 7 chr4 937753 938047 -183350615 - AluSc SINE Alu -17 292 1 2320 72 21 3 chr4 938155 938445 -183350217 - AluY SINE Alu -15 296 2 23 0 0 0 chr4 939381 939404 -183349258 + AT_rich Low_complexity Low_complexity 1 23 0 1824 154 3 14 chr4 939404 939697 -183348965 - AluJo SINE Alu -22 290 1 2218 128 0 0 chr4 939707 940004 -183348658 - AluSx SINE Alu -15 297 1 843 275 36 14 chr4 941103 941379 -183347283 - L3b LINE CR1 -200 1383 1102 367 246 95 8 chr4 941740 941866 -183346796 + L1ME LINE L1 5344 5480 -641 2684 146 116 30 chr4 941899 942705 -183345957 + L1MCa LINE L1 1203 2207 -4219 2070 106 34 20 chr4 942705 942997 -183345665 + AluSx SINE Alu 1 296 -16 2684 146 116 30 chr4 942997 943256 -183345406 + L1MCa LINE L1 2207 2442 -3984 6690 209 75 114 chr4 943392 944235 -183344427 + L1MCa LINE L1 2428 3303 -3123 986 210 46 1 chr4 944235 944536 -183344126 - MER2 DNA MER2_type 0 345 1 6690 209 75 114 chr4 944536 946181 -183342481 + L1MCa LINE L1 3303 5106 -1320 319 343 73 7 chr4 946825 946962 -183341700 - MIR SINE MIR -97 165 20 238 220 0 0 chr4 947289 947339 -183341323 + L2 LINE L2 3183 3232 -81 350 229 58 122 chr4 947718 947923 -183340739 + MIR SINE MIR 1 192 -70 203 351 22 30 chr4 948001 948135 -183340527 + L2 LINE L2 2622 2754 -560 297 280 13 70 chr4 948239 948396 -183340266 - MIR SINE MIR 0 262 115 * 564 209 104 86 chr4 948391 948510 -183340152 + MIR SINE MIR 35 161 -101 2157 128 3 0 chr4 948510 948806 -183339856 + AluSx SINE Alu 1 297 -15 564 209 104 86 chr4 948806 948906 -183339756 + MIR SINE MIR 161 258 -4 1373 191 93 31 chr4 948949 949273 -183339389 + MER2 DNA MER2_type 1 344 0 918 251 212 6 chr4 949343 949706 -183338956 - L2 LINE L2 -337 2977 2540 7541 29 13 0 chr4 949717 950787 -183337875 - L1PA4 LINE L1 0 6155 5082 343 269 185 0 chr4 950794 950902 -183337760 - MIR SINE MIR -108 154 27 750 293 98 32 chr4 951260 951578 -183337084 + L1MDa LINE L1 27 374 -6166 1651 167 25 117 chr4 951578 952050 -183336612 - MSTB1 LTR MaLR 0 432 4 750 293 98 32 chr4 952050 952100 -183336562 + L1MDa LINE L1 374 419 -6121 234 313 1 13 chr4 952191 952279 -183336383 + L1MDa LINE L1 778 865 -5665 2539 92 14 0 chr4 952398 952747 -183335915 + L1PB1 LINE L1 5794 6147 -4 1480 229 72 13 chr4 952756 953333 -183335329 + L1MDa LINE L1 2155 2650 -3890 1173 176 5 11 chr4 953333 953521 -183335141 + AluJo SINE Alu 1 187 -125 1000 253 68 3 chr4 953629 953965 -183334697 + L1MDa LINE L1 2761 3118 -3422 192 304 14 29 chr4 954002 954071 -183334591 + L2 LINE L2 1164 1231 -2083 200 289 19 58 chr4 954097 954201 -183334461 + L2 LINE L2 1298 1397 -1917 1137 230 157 3 chr4 954223 954566 -183334096 + MSTD LTR MaLR 1 396 0 280 242 0 102 chr4 954775 954903 -183333759 + L2 LINE L2 3198 3312 -1 425 331 64 0 chr4 955288 955445 -183333217 + MIR SINE MIR 73 239 -23 478 330 52 6 chr4 955525 955698 -183332964 - MIR SINE MIR -70 192 12 265 215 131 0 chr4 956140 956247 -183332415 - L1ME4a LINE L1 -171 5950 5830 409 254 224 15 chr4 956383 956584 -183332078 + MIR SINE MIR 9 251 -11 378 303 25 8 chr4 956900 957022 -183331640 - MER5B DNA MER1_type 0 178 55 1171 257 150 1 chr4 957153 957847 -183330815 - L1ME3A LINE L1 -48 6122 5318 982 156 11 5 chr4 960011 960197 -183328465 - Charlie1 DNA MER1_type -4 2757 2571 389 235 50 50 chr4 961736 961915 -183326747 + L1M4 LINE L1 5096 5274 -872 2192 75 0 4 chr4 962892 963159 -183325503 + AluY SINE Alu 1 266 -45 2238 102 0 16 chr4 963365 963669 -183324993 + AluSx SINE Alu 14 312 0 234 354 42 23 chr4 964190 964405 -183324257 + MIR SINE MIR 25 243 -19 228 297 121 11 chr4 964763 964945 -183323717 + L1MDa LINE L1 1886 2087 -4634 2194 129 0 3 chr4 965971 966280 -183322382 - AluSx SINE Alu -4 308 1 232 273 65 0 chr4 967400 967477 -183321185 + L1ME3A LINE L1 6051 6132 -38 416 270 94 56 chr4 967509 967831 -183320831 + L1MDa LINE L1 3235 3609 -2931 1177 244 4 8 chr4 967831 968069 -183320593 + MER8 DNA MER2_type 1 237 -2 416 270 94 56 chr4 968069 968082 -183320580 + L1MDa LINE L1 3609 3620 -2920 338 83 0 0 chr4 968094 968142 -183320520 + AluYb8 SINE Alu 84 131 -177 1576 55 0 0 chr4 968174 968356 -183320306 + AluY SINE Alu 33 214 -97 2255 176 117 4 chr4 968476 968970 -183319692 - L1MB4 LINE L1 -8 6172 5623 565 238 171 6 chr4 968971 969152 -183319510 + LTR16A1 LTR ERVL 247 457 0 2386 107 3 0 chr4 969551 969861 -183318801 + AluSx SINE Alu 1 311 -1 198 258 40 113 chr4 970386 970510 -183318152 - MIR SINE MIR -111 151 37 258 0 30 0 chr4 970650 970683 -183317979 + (TTTG)n Simple_repeat Simple_repeat 2 128 0 2174 119 0 3 chr4 970683 970965 -183317697 - AluSx SINE Alu -9 303 1 951 254 82 21 chr4 971049 971630 -183317032 - L1ME LINE L1 -3750 2465 1892 560 269 14 30 chr4 971642 971861 -183316801 - L1ME LINE L1 -4216 2000 1423 * 4541 171 22 30 chr4 971848 972430 -183316232 - L1MB1 LINE L1 -1 6167 5582 2019 105 84 3 chr4 972430 972715 -183315947 - AluSg1 SINE Alu -1 308 1 4541 171 22 30 chr4 972715 973538 -183315124 - L1MB1 LINE L1 -586 5582 4772 2002 126 22 41 chr4 973538 973856 -183314806 - AluSx SINE Alu 0 312 1 4541 171 22 30 chr4 973856 973904 -183314758 - L1MB1 LINE L1 -1396 4772 4725 6817 175 34 14 chr4 973910 974913 -183313749 + L1 LINE L1 3255 4299 -1847 2146 96 21 11 chr4 974913 975216 -183313446 + AluY SINE Alu 1 306 0 6817 175 34 14 chr4 975216 975678 -183312984 + L1 LINE L1 4299 4750 -1396 686 264 89 84 chr4 975787 976519 -183312143 - L1ME LINE L1 -4896 1321 684 286 301 11 23 chr4 976755 976931 -183311731 - L1ME LINE L1 -5607 598 425 619 153 51 0 chr4 977109 977227 -183311435 + MSTD LTR MaLR 273 396 0 470 301 164 14 chr4 977227 977519 -183311143 + L2 LINE L2 2315 2650 -664 252 296 58 64 chr4 977778 977950 -183310712 + L2 LINE L2 3142 3312 -1 249 325 44 26 chr4 978118 978232 -183310430 + L3 LINE CR1 332 447 -1130 187 250 0 0 chr4 978555 978599 -183310063 + L3 LINE CR1 410 453 -1124 342 188 75 25 chr4 978762 978842 -183309820 - L2 LINE L2 -37 3235 3152 337 294 59 13 chr4 979513 979666 -183308996 + L3 LINE CR1 1195 1354 -223 2239 112 3 32 chr4 979915 980228 -183308434 - AluSx SINE Alu -8 304 1 6002 222 82 70 chr4 980522 982154 -183306508 - MER52A LTR ERV1 0 1755 104 1056 203 121 4 chr4 982216 982472 -183306190 - MER52A LTR ERV1 -1469 286 1 470 261 85 71 chr4 982801 983012 -183305650 - MIR SINE MIR -21 241 28 198 0 0 0 chr4 983340 983362 -183305300 + (T)n Simple_repeat Simple_repeat 1 22 0 259 291 13 32 chr4 984443 984601 -183304061 + G-rich Low_complexity Low_complexity 3 157 0 * 297 222 16 60 chr4 984513 984784 -183303878 + (TGGG)n Simple_repeat Simple_repeat 1 259 0 199 337 36 0 chr4 984844 984927 -183303735 + MIR3 SINE MIR 114 199 -9 858 276 56 0 chr4 985685 985917 -183302745 + MIR SINE MIR 8 252 -10 429 308 19 30 chr4 986106 986369 -183302293 - L1MC5 LINE L1 -215 7746 7487 610 237 28 96 chr4 986880 987171 -183301491 - L1MC5 LINE L1 -844 7117 6847 413 304 55 55 chr4 987220 987437 -183301225 - L1MC4a LINE L1 -1137 6671 6455 14602 125 27 12 chr4 987457 989266 -183299396 - Tigger1 DNA MER2_type 0 2418 564 1838 144 34 27 chr4 989266 989558 -183299104 + AluJo SINE Alu 1 294 -18 14602 125 27 12 chr4 989558 990123 -183298539 - Tigger1 DNA MER2_type -1854 564 9 374 269 12 76 chr4 990245 990416 -183298246 - L1MC4a LINE L1 -1537 6271 6112 3171 227 111 48 chr4 990416 991264 -183297398 + L1MEc LINE L1 2179 2972 -3243 1606 145 0 9 chr4 991264 991492 -183297170 + AluSg/x SINE Alu 75 300 -12 3171 227 111 48 chr4 991492 991832 -183296830 + L1MEc LINE L1 2972 3289 -2926 1466 205 28 11 chr4 991832 992115 -183296547 + AluJb SINE Alu 1 288 -14 3171 227 111 48 chr4 992115 992454 -183296208 + L1MEc LINE L1 3289 3753 -2462 2223 98 16 16 chr4 992547 992852 -183295810 - AluSx SINE Alu -7 305 1 253 264 112 8 chr4 992876 993001 -183295661 - HAL1 LINE L1 -2280 227 90 587 275 104 40 chr4 993051 993361 -183295301 - L1MEd LINE L1 -4502 1627 1338 2523 68 6 6 chr4 993361 993672 -183294990 - AluY SINE Alu 0 311 1 587 275 104 40 chr4 993672 994252 -183294410 - L1MEd LINE L1 -4791 1338 692 35 41 0 0 chr4 1001696 1001745 -183286917 + GC_rich Low_complexity Low_complexity 1 49 0 21 0 0 0 chr4 1003105 1003126 -183285536 + GC_rich Low_complexity Low_complexity 1 21 0 515 96 48 10 chr4 1003339 1003443 -183285219 + C-rich Low_complexity Low_complexity 1 108 0 181 238 71 0 chr4 1004103 1004145 -183284517 + MER5B DNA MER1_type 7 51 -127 382 216 104 8 chr4 1004160 1004285 -183284377 + L1MC4a LINE L1 6124 6260 -1548 1451 220 20 41 chr4 1004353 1004405 -183284257 - Charlie1 DNA MER1_type -6 2755 2703 1678 114 35 98 chr4 1004405 1004704 -183283958 + AluJb SINE Alu 1 281 -31 2277 110 0 0 chr4 1004704 1005003 -183283659 + AluSx SINE Alu 14 312 0 1678 114 35 98 chr4 1005003 1005019 -183283643 + AluJb SINE Alu 281 296 -16 1451 220 20 41 chr4 1005019 1005357 -183283305 - Charlie1 DNA MER1_type -58 2703 2373 333 191 0 31 chr4 1006868 1007202 -183281460 + (TTCA)n Simple_repeat Simple_repeat 1 323 0 524 130 0 53 chr4 1007226 1007395 -183281267 + (TTCA)n Simple_repeat Simple_repeat 3 162 0 242 303 45 8 chr4 1008941 1009073 -183279589 + L2 LINE L2 2837 2973 -340 6095 224 61 20 chr4 1009966 1011963 -183276699 + L1M4 LINE L1 9 2096 -4550 11524 136 77 9 chr4 1011972 1013475 -183275187 + L1M4c LINE L1 20 1724 -4660 1979 90 115 4 chr4 1013475 1013753 -183274909 + AluSq SINE Alu 1 309 -4 11524 136 77 9 chr4 1013753 1014455 -183274207 + L1M4c LINE L1 1724 2376 -4008 532 181 0 0 chr4 1014455 1014549 -183274113 - AluJ/FRAM SINE Alu -3 309 216 2641 192 30 3 chr4 1014662 1015229 -183273433 + L1MB3 LINE L1 5586 6167 -16 458 298 31 31 chr4 1015246 1015538 -183273124 - L1M4c LINE L1 -4144 2240 1949 2064 113 26 29 chr4 1015613 1015924 -183272738 + AluSx SINE Alu 1 310 -2 334 257 44 53 chr4 1015946 1016152 -183272510 + L1M4 LINE L1 2514 2717 -3929 4151 227 63 49 chr4 1016172 1017068 -183271594 + L1M4 LINE L1 2771 3653 -2991 1863 130 72 10 chr4 1017068 1017360 -183271302 + AluJb SINE Alu 1 310 -2 4151 227 63 49 chr4 1017360 1017400 -183271262 + L1M4 LINE L1 3653 3691 -2953 2289 103 0 7 chr4 1017400 1017701 -183270961 + AluY SINE Alu 1 299 -12 4151 227 63 49 chr4 1017701 1018305 -183270357 + L1M4 LINE L1 3691 4334 -2310 3189 221 25 30 chr4 1018310 1019190 -183269472 + L1M4 LINE L1 4642 5517 -1127 284 292 109 22 chr4 1019751 1019888 -183268774 + MIR3 SINE MIR 18 166 -42 251 326 34 14 chr4 1020714 1020861 -183267801 + (CA)n Simple_repeat Simple_repeat 1 150 0 226 307 12 42 chr4 1021294 1021460 -183267202 + G-rich Low_complexity Low_complexity 3 163 0 26 50 0 0 chr4 1021784 1021824 -183266838 + AT_rich Low_complexity Low_complexity 1 40 0 1082 219 26 0 chr4 1023196 1023429 -183265233 - MLT1E2 LTR MaLR 0 626 388 236 242 15 15 chr4 1023440 1023506 -183265156 - MLT1E1 LTR MaLR -530 124 59 2307 150 20 60 chr4 1023527 1023973 -183264689 - MSTC LTR MaLR 0 428 1 284 278 14 0 chr4 1024584 1024656 -183264006 + L2 LINE L2 2553 2625 -689 223 186 0 29 chr4 1024669 1024739 -183263923 + (TA)n Simple_repeat Simple_repeat 1 68 0 414 234 32 60 chr4 1024745 1024993 -183263669 - L1ME LINE L1 -404 5717 5416 1071 205 4 39 chr4 1026088 1026322 -183262340 + AluJb SINE Alu 74 299 -13 7040 107 25 21 chr4 1026325 1027565 -183261097 - HSMAR2 DNA Mariner -55 1247 3 195 100 0 0 chr4 1028219 1028249 -183260413 + (A)n Simple_repeat Simple_repeat 1 30 0 477 271 26 42 chr4 1028308 1028500 -183260162 + MIR SINE MIR 30 218 -44 2266 131 50 77 chr4 1029230 1029674 -183258988 + MSTB1 LTR MaLR 1 432 0 259 252 93 0 chr4 1030230 1030337 -183258325 - L2 LINE L2 -1 3312 3196 1214 207 29 19 chr4 1030603 1030912 -183257750 + MLT1B LTR MaLR 79 390 0 654 251 55 42 chr4 1030953 1031260 -183257402 - LTR37A LTR ERV1 -111 315 5 281 275 0 11 chr4 1032170 1032261 -183256401 - MLT1F1 LTR MaLR 0 567 478 345 315 0 0 chr4 1032434 1032612 -183256050 + C-rich Low_complexity Low_complexity 1 178 0 970 150 23 6 chr4 1035787 1035960 -183252702 - AluJo SINE Alu -125 187 12 297 284 68 34 chr4 1036253 1036401 -183252261 + MIR3 SINE MIR 21 173 -35 969 356 87 73 chr4 1037313 1037802 -183250860 + L1M4 LINE L1 2734 3215 -2931 1917 158 10 3 chr4 1037802 1038112 -183250550 + AluSx SINE Alu 1 312 0 969 356 87 73 chr4 1038112 1039151 -183249511 + L1M4 LINE L1 3215 4288 -1858 2111 120 7 0 chr4 1039151 1039459 -183249203 + AluSq SINE Alu 1 310 -3 969 356 87 73 chr4 1039459 1039549 -183249113 + L1M4 LINE L1 4288 4375 -1771 267 289 160 5 chr4 1040078 1040234 -183248428 + MIR SINE MIR 10 187 -72 2311 77 0 3 chr4 1041621 1041918 -183246744 - AluY SINE Alu -15 296 1 895 206 12 6 chr4 1041971 1042141 -183246521 - L1MB7 LINE L1 -10 6174 6004 328 270 0 63 chr4 1042316 1042442 -183246220 - MSTB1 LTR MaLR -314 118 1 266 133 0 0 chr4 1042486 1042531 -183246131 - MLT2A2 LTR ERVL -2 451 407 594 266 132 20 chr4 1042543 1042955 -183245707 - MLT-int LTR MaLR -381 1354 841 680 199 15 0 chr4 1043139 1043275 -183245387 + MLT1A1 LTR MaLR 227 364 -1 1595 265 54 17 chr4 1043299 1043904 -183244758 - L1MB7 LINE L1 -187 5997 5335 2158 112 0 3 chr4 1043904 1044207 -183244455 - AluSx SINE Alu -10 302 1 1595 265 54 17 chr4 1044207 1044275 -183244387 - L1MB7 LINE L1 -849 5335 5271 216 291 25 0 chr4 1048871 1048950 -183239712 + (CA)n Simple_repeat Simple_repeat 1 81 0 219 256 166 25 chr4 1050196 1050395 -183238267 + L2 LINE L2 2355 2581 -733 201 39 0 0 chr4 1051901 1051927 -183236735 + (A)n Simple_repeat Simple_repeat 1 26 0 186 266 0 0 chr4 1055354 1055433 -183233229 + (CA)n Simple_repeat Simple_repeat 2 80 0 240 355 58 11 chr4 1057728 1058153 -183230509 + L1ME LINE L1 1267 1877 -4954 2199 74 0 0 chr4 1058172 1058456 -183230206 + AluSg SINE Alu 11 294 -16 489 240 58 90 chr4 1058776 1059088 -183229574 + L1ME LINE L1 2759 3035 -3906 1532 179 29 18 chr4 1059088 1059212 -183229450 + AluJo SINE Alu 1 122 -190 195 42 0 0 chr4 1059212 1059236 -183229426 + (TAA)n Simple_repeat Simple_repeat 2 25 0 1532 179 29 18 chr4 1059236 1059390 -183229272 + AluJo SINE Alu 122 282 -30 489 240 58 90 chr4 1059390 1059519 -183229143 + L1ME LINE L1 3035 3167 -3774 433 275 89 59 chr4 1059511 1059747 -183228915 + L1ME LINE L1 4803 5045 -1896 * 556 235 67 0 chr4 1059747 1059866 -183228796 - FLAM_C SINE Alu -16 127 1 242 287 35 0 chr4 1059876 1059963 -183228699 + L1ME LINE L1 5075 5164 -1777 2122 113 20 0 chr4 1059963 1060256 -183228406 + AluSx SINE Alu 1 299 -13 633 129 20 0 chr4 1060256 1060357 -183228305 + AluSg/x SINE Alu 208 310 0 419 278 93 5 chr4 1060357 1060551 -183228111 + L1ME LINE L1 5177 5387 -1554 641 297 154 22 chr4 1060553 1061092 -183227570 + L1ME LINE L1 5420 6029 -912 552 282 114 16 chr4 1061219 1061592 -183227070 + L1ME LINE L1 6164 6594 -363 225 154 0 0 chr4 1061898 1061937 -183226725 + GA-rich Low_complexity Low_complexity 2 40 0 218 205 0 0 chr4 1063846 1063885 -183224777 + (CA)n Simple_repeat Simple_repeat 1 39 0 194 302 35 0 chr4 1063891 1063977 -183224685 + L2 LINE L2 3155 3243 -29 218 204 10 92 chr4 1064347 1064543 -183224119 + (TG)n Simple_repeat Simple_repeat 1 180 0 252 288 16 38 chr4 1067303 1067487 -183221175 + (TG)n Simple_repeat Simple_repeat 1 180 0 601 231 109 7 chr4 1072094 1072241 -183216421 - AluJb SINE Alu -10 302 141 23 0 0 0 chr4 1072315 1072338 -183216324 + AT_rich Low_complexity Low_complexity 1 23 0 2127 130 0 0 chr4 1072347 1072646 -183216016 - AluSx SINE Alu -9 303 5 432 315 46 5 chr4 1073856 1074072 -183214590 - MLT1J LTR MaLR -16 495 271 470 359 53 18 chr4 1075024 1075364 -183213298 - L1MD2 LINE L1 -444 5915 5564 308 236 101 0 chr4 1083983 1084072 -183204590 + L1MC3 LINE L1 7685 7782 -3 250 264 60 36 chr4 1085581 1085748 -183202914 + (CAGGG)n Simple_repeat Simple_repeat 4 174 0 252 245 40 20 chr4 1088796 1088947 -183199715 + (CG)n Simple_repeat Simple_repeat 1 154 0 246 184 37 59 chr4 1089029 1089165 -183199497 + (CCGCG)n Simple_repeat Simple_repeat 4 136 0 23 0 0 0 chr4 1089176 1089199 -183199463 + GC_rich Low_complexity Low_complexity 1 23 0 180 0 0 0 chr4 1089283 1089303 -183199359 + (CGGGG)n Simple_repeat Simple_repeat 2 21 0 2212 116 0 3 chr4 1092146 1092448 -183196214 - AluSq SINE Alu -12 301 1 2091 155 112 4 chr4 1092542 1093007 -183195655 - L1MA8 LINE L1 -6 6285 5771 199 400 22 0 chr4 1093049 1093139 -183195523 + MIR SINE MIR 97 188 -74 1319 227 96 14 chr4 1093295 1093661 -183195001 - MSTD LTR MaLR 0 396 1 824 285 112 75 chr4 1093757 1094198 -183194464 + L1MEd LINE L1 332 756 -5660 935 120 0 0 chr4 1094198 1094323 -183194339 - FLAM_C SINE Alu -8 125 1 824 285 112 75 chr4 1094323 1095038 -183193624 + L1MEd LINE L1 756 1530 -4886 321 353 78 41 chr4 1095060 1095278 -183193384 + L1MEd LINE L1 1407 1632 -4794 704 244 73 23 chr4 1095285 1095563 -183193099 - MLT1E LTR MaLR -2 591 235 6056 211 92 56 chr4 1095789 1096221 -183192441 - L1MB3 LINE L1 -7 6176 5761 2627 100 28 17 chr4 1096221 1096581 -183192081 + THE1B LTR MaLR 1 364 0 6056 211 92 56 chr4 1096581 1096837 -183191825 - L1MB3 LINE L1 -422 5761 5516 192 97 0 0 chr4 1096837 1096868 -183191794 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 6056 211 92 56 chr4 1096868 1096918 -183191744 - L1MB3 LINE L1 -667 5516 5469 1467 172 36 20 chr4 1096918 1097105 -183191557 - AluJo SINE Alu 0 312 117 225 0 0 0 chr4 1097105 1097130 -183191532 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 1467 172 36 20 chr4 1097130 1097245 -183191417 - AluJo SINE Alu -195 117 5 6056 211 92 56 chr4 1097245 1098855 -183189807 - L1MB3 LINE L1 -714 5469 3919 1705 164 42 0 chr4 1098855 1099141 -183189521 - AluJb SINE Alu -14 298 1 6056 211 92 56 chr4 1099141 1099157 -183189505 - L1MB3 LINE L1 -2264 3919 3905 1928 151 10 10 chr4 1099157 1099468 -183189194 - AluJo SINE Alu -1 311 1 6056 211 92 56 chr4 1099468 1100536 -183188126 - L1MB3 LINE L1 -2278 3905 2614 191 373 20 59 chr4 1100850 1101054 -183187608 - MIR SINE MIR -34 228 33 2015 226 28 67 chr4 1102060 1102485 -183186177 - L1MC/D LINE L1 -466 5776 5336 1907 178 36 0 chr4 1102485 1102817 -183185845 + MER2 DNA MER2_type 1 344 0 2015 226 28 67 chr4 1102817 1103511 -183185151 - L1MC/D LINE L1 -906 5336 4617 2122 104 0 4 chr4 1103511 1103825 -183184837 - AluSc SINE Alu 0 313 1 1791 171 0 16 chr4 1103825 1104130 -183184532 - AluJo SINE Alu -12 300 1 2015 226 28 67 chr4 1104130 1104207 -183184455 - L1MC/D LINE L1 -1534 4708 4630 2330 103 0 0 chr4 1104213 1104515 -183184147 - AluSq SINE Alu -11 302 1 1065 210 186 35 chr4 1104529 1104652 -183184010 + LTR54B LTR ERV1 1 104 -394 1582 176 29 0 chr4 1104652 1104950 -183183712 + AluJo SINE Alu 1 306 0 1065 210 186 35 chr4 1104950 1105225 -183183437 + LTR54B LTR ERV1 104 472 -26 624 151 123 0 chr4 1105225 1105331 -183183331 + FLAM_A SINE Alu 1 119 -14 1065 210 186 35 chr4 1105331 1105359 -183183303 + LTR54B LTR ERV1 472 494 -4 1621 181 7 11 chr4 1106088 1106375 -183182287 + AluJo SINE Alu 1 286 -26 5867 219 32 56 chr4 1106942 1107489 -183181173 - L1M4 LINE L1 -1449 4933 4374 7283 94 27 17 chr4 1107489 1108486 -183180176 - LTR13 LTR ERVK 0 1007 1 5867 219 32 56 chr4 1108486 1108601 -183180061 - L1M4 LINE L1 -2008 4374 4258 225 0 0 0 chr4 1108601 1108626 -183180036 + (TG)n Simple_repeat Simple_repeat 2 26 0 2210 80 0 7 chr4 1108626 1108913 -183179749 - AluSp SINE Alu -28 285 1 1581 191 3 16 chr4 1108916 1109219 -183179443 - AluJb SINE Alu -13 299 1 5867 219 32 56 chr4 1109219 1110080 -183178582 - L1M4 LINE L1 -2125 4257 3377 1640 143 108 7 chr4 1110080 1110359 -183178303 - AluJb SINE Alu -5 307 1 5867 219 32 56 chr4 1110359 1110542 -183178120 - L1M4 LINE L1 -3005 3377 3191 3400 56 2 43 chr4 1110542 1110944 -183177718 - L1PA8 LINE L1 -2 6170 5788 2403 79 0 13 chr4 1110944 1111259 -183177403 - AluY SINE Alu 0 311 1 3400 56 2 43 chr4 1111259 1111323 -183177339 - L1PA8 LINE L1 -384 5788 5723 5867 219 32 56 chr4 1111323 1111598 -183177064 - L1M4 LINE L1 -3191 3191 2997 2951 92 57 7 chr4 1111598 1112021 -183176641 - MLT2A1 LTR ERVL 0 444 1 5867 219 32 56 chr4 1112021 1112164 -183176498 - L1M4 LINE L1 -3385 2997 2852 1732 221 79 16 chr4 1112980 1114006 -183174656 - L1M4 LINE L1 -3473 2909 1723 * 2388 229 33 24 chr4 1114002 1114024 -183174638 + L1MB4 LINE L1 4685 4705 -1475 2265 83 7 3 chr4 1114024 1114325 -183174337 + AluY SINE Alu 1 302 -9 2388 229 33 24 chr4 1114325 1114929 -183173733 + L1MB4 LINE L1 4705 5337 -843 2162 93 35 0 chr4 1114929 1115219 -183173443 - AluSx SINE Alu -12 300 1 2388 229 33 24 chr4 1115219 1115709 -183172953 + L1MB4 LINE L1 5337 5821 -359 420 286 11 6 chr4 1115707 1115882 -183172780 + L1M4 LINE L1 2695 2870 -3276 * 1663 209 32 0 chr4 1115888 1116232 -183172430 + L1MB4 LINE L1 5826 6180 0 2036 256 72 1 chr4 1116410 1117307 -183171355 - L1MB5 LINE L1 -133 6041 5080 248 303 0 34 chr4 1117358 1117536 -183171126 + (CCGCT)n Simple_repeat Simple_repeat 2 173 0 * 297 179 0 77 chr4 1117458 1117861 -183170801 + CT-rich Low_complexity Low_complexity 1 372 0 262 276 10 20 chr4 1118271 1118369 -183170293 + L1M4c LINE L1 1233 1329 -5055 2768 43 0 20 chr4 1118369 1118720 -183169942 + L1PA5 LINE L1 5811 6154 0 1142 123 0 0 chr4 1118777 1118932 -183169730 + AluSx SINE Alu 1 155 -157 756 264 81 4 chr4 1118940 1119175 -183169487 + MER45B DNA AcHobo 244 496 -544 949 143 0 0 chr4 1119179 1119319 -183169343 + AluSx SINE Alu 148 287 -23 1532 296 77 0 chr4 1119373 1119957 -183168705 + MER45B DNA AcHobo 206 834 -206 303 151 43 158 chr4 1119958 1119984 -183168678 + MER45B DNA AcHobo 777 804 -777 2202 96 3 6 chr4 1119984 1120296 -183168366 + AluY SINE Alu 1 311 0 303 151 43 158 chr4 1120296 1120408 -183168254 + MER45B DNA AcHobo 804 899 -141 2010 89 37 0 chr4 1120412 1120531 -183168131 + AluSc SINE Alu 1 114 -203 188 0 74 0 chr4 1120531 1120558 -183168104 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2010 89 37 0 chr4 1120558 1120745 -183167917 + AluSc SINE Alu 114 317 0 638 121 0 0 chr4 1120751 1120842 -183167820 + AluSg/x SINE Alu 210 300 -12 1236 161 28 117 chr4 1120853 1121281 -183167381 + L1M1 LINE L1 5178 5579 -724 477 49 99 0 chr4 1122260 1122341 -183166321 + L1M1 LINE L1 5574 5662 -641 1498 140 0 9 chr4 1122625 1122868 -183165794 + AluJb SINE Alu 64 304 0 370 273 28 103 chr4 1123466 1123719 -183164943 + MER21B LTR ERV1 13 246 -617 686 263 64 11 chr4 1123805 1124122 -183164540 + MER21B LTR ERV1 466 806 -125 557 112 0 78 chr4 1124154 1124270 -183164392 + MER4D LTR ERV1 1 107 -796 3220 187 103 72 chr4 1124425 1125130 -183163532 - LTR28 LTR ERV1 -69 951 209 2436 68 0 7 chr4 1125130 1125437 -183163225 + AluY SINE Alu 1 305 -6 3220 187 103 72 chr4 1125437 1125653 -183163009 - LTR28 LTR ERV1 -811 209 1 * 3834 119 37 78 chr4 1125653 1126009 -183162653 + MER4D LTR ERV1 103 472 -400 2248 86 16 3 chr4 1126009 1126313 -183162349 - AluSc SINE Alu -1 308 1 3834 119 37 78 chr4 1126313 1126759 -183161903 + MER4D LTR ERV1 472 872 0 518 268 131 13 chr4 1127062 1127333 -183161329 + L1ME3 LINE L1 5862 6164 0 224 352 138 19 chr4 1129240 1129450 -183159212 + MIR SINE MIR 2 236 -26 674 178 23 23 chr4 1129561 1129690 -183158972 - AluJb SINE Alu -180 132 4 545 165 189 43 chr4 1130934 1131098 -183157564 - MER20 DNA MER1_type -31 188 1 1758 93 4 8 chr4 1131281 1131528 -183157134 - AluSx SINE Alu -3 309 64 1012 167 6 0 chr4 1131638 1131806 -183156856 + AluJb SINE Alu 133 301 -11 208 349 64 9 chr4 1132077 1132186 -183156476 + L3b LINE CR1 1271 1385 -198 248 137 20 0 chr4 1133186 1133237 -183155425 + G-rich Low_complexity Low_complexity 2 53 0 183 355 153 16 chr4 1133775 1133958 -183154704 + L2 LINE L2 1166 1373 -1941 1287 111 0 0 chr4 1134090 1134448 -183154214 + (G)n Simple_repeat Simple_repeat 1 359 0 184 261 68 57 chr4 1136948 1137036 -183151626 + L2 LINE L2 1891 1979 -1335 22 0 0 0 chr4 1137427 1137449 -183151213 + GC_rich Low_complexity Low_complexity 1 22 0 506 239 163 38 chr4 1139784 1139993 -183148669 - MER58 DNA MER1_type -2182 238 4 639 254 0 8 chr4 1141261 1141395 -183147267 + FLAM_A SINE Alu 2 134 -8 1092 128 6 28 chr4 1141503 1141682 -183146980 - AluSg/x SINE Alu -3 309 135 2190 103 3 0 chr4 1141682 1141974 -183146688 - AluY SINE Alu -18 293 1 2484 60 0 13 chr4 1141984 1142299 -183146363 - AluY SINE Alu 0 311 1 1358 214 30 4 chr4 1143275 1143546 -183145116 + AluJo SINE Alu 1 278 -34 194 307 227 56 chr4 1146442 1147028 -183141634 + L2 LINE L2 1796 2481 -833 258 353 88 20 chr4 1147329 1147533 -183141129 + L2 LINE L2 3092 3309 -4 212 330 113 0 chr4 1147977 1148083 -183140579 + L2 LINE L2 1461 1578 -1736 209 326 111 35 chr4 1148275 1148447 -183140215 + L2 LINE L2 1829 2013 -1301 793 308 101 38 chr4 1148452 1148644 -183140018 + L2 LINE L2 2127 2305 -1009 1543 190 11 0 chr4 1148644 1148954 -183139708 - AluJo SINE Alu 0 313 1 793 308 101 38 chr4 1148954 1149263 -183139399 + L2 LINE L2 2305 2661 -653 225 336 99 0 chr4 1149384 1149515 -183139147 + L2 LINE L2 2886 3029 -284 211 289 214 27 chr4 1149528 1149715 -183138947 + L2 LINE L2 2998 3219 -94 23 0 0 0 chr4 1149745 1149768 -183138894 + AT_rich Low_complexity Low_complexity 1 23 0 926 324 140 20 chr4 1150420 1151183 -183137479 + Charlie7 DNA MER1_type 371 1225 -1387 846 226 32 16 chr4 1151319 1151505 -183137157 + AluJo SINE Alu 123 311 -1 1285 234 72 37 chr4 1151607 1152065 -183136597 + L1MB7 LINE L1 3454 3927 -2219 434 163 0 12 chr4 1152065 1152145 -183136517 + MLT1A2 LTR MaLR 296 374 0 1665 236 168 27 chr4 1152155 1152256 -183136406 + L1MB7 LINE L1 5213 5298 -886 2203 68 3 20 chr4 1152256 1152552 -183136110 - AluY SINE Alu -20 291 1 1665 236 168 27 chr4 1152552 1152879 -183135783 + L1MB7 LINE L1 5298 5578 -606 2021 97 7 52 chr4 1152879 1153187 -183135475 + AluSc SINE Alu 1 294 -15 1665 236 168 27 chr4 1153187 1153583 -183135079 + L1MB7 LINE L1 5578 6184 0 195 167 28 28 chr4 1153667 1153739 -183134923 + (CAGGG)n Simple_repeat Simple_repeat 4 75 0 565 196 36 29 chr4 1153925 1154063 -183134599 + MER33 DNA MER1_type 27 165 -159 801 188 0 7 chr4 1154063 1154207 -183134455 - FLAM_C SINE Alu 0 143 1 2187 85 7 3 chr4 1154218 1154512 -183134150 - AluY SINE Alu -16 295 1 450 172 117 14 chr4 1154520 1154665 -183133997 + MER33 DNA MER1_type 157 316 -8 339 217 24 12 chr4 1154979 1155062 -183133600 - MER20 DNA MER1_type -135 84 1 311 274 263 5 chr4 1155151 1155337 -183133325 - L1ME LINE L1 -348 5818 5585 269 254 0 0 chr4 1155489 1155548 -183133114 + (CGTG)n Simple_repeat Simple_repeat 1 59 0 908 279 75 53 chr4 1155549 1156000 -183132662 - MLT2B1 LTR ERVL -58 462 2 316 227 31 0 chr4 1156009 1156106 -183132556 - L1ME LINE L1 -728 5436 5337 1162 176 0 10 chr4 1156106 1156305 -183132357 + AluSg/x SINE Alu 105 301 -11 1309 290 77 6 chr4 1156329 1156863 -183131799 - L1ME LINE L1 -850 5296 4725 1200 233 40 20 chr4 1156899 1157301 -183131361 - L1MB2 LINE L1 -1 6182 5787 1504 230 101 7 chr4 1157312 1157768 -183130894 - MLT2B2 LTR ERVL -15 500 2 1582 220 51 3 chr4 1157779 1158111 -183130551 - MER7A DNA MER2_type 0 346 1 411 236 126 8 chr4 1158111 1158227 -183130435 - L1MB2 LINE L1 -387 5784 5650 293 263 42 34 chr4 1158364 1158482 -183130180 - L1MB2 LINE L1 -706 5477 5359 227 120 250 10 chr4 1158583 1158683 -183129979 - L1MB2 LINE L1 -920 5226 5103 260 272 0 12 chr4 1158946 1159027 -183129635 - HAL1 LINE L1 -847 1660 1581 2177 108 7 3 chr4 1162163 1162468 -183126194 - AluSx SINE Alu -6 306 1 438 326 97 81 chr4 1162909 1163188 -183125474 + L1MEd LINE L1 561 834 -1664 1665 137 32 11 chr4 1163188 1163472 -183125190 + AluJo SINE Alu 1 290 -22 438 326 97 81 chr4 1163472 1163535 -183125127 + L1MEd LINE L1 834 895 -1603 1606 143 37 0 chr4 1163535 1163780 -183124882 + AluJb SINE Alu 35 288 -24 2063 90 35 7 chr4 1163786 1164076 -183124586 + AluSx SINE Alu 1 298 -14 438 326 97 81 chr4 1164076 1164593 -183124069 + L1MEd LINE L1 899 1523 -975 364 267 30 0 chr4 1164637 1164738 -183123924 - MER3 DNA MER1_type -76 133 30 487 301 65 38 chr4 1164745 1164931 -183123731 + L1MEd LINE L1 2320 2510 -3619 394 230 34 34 chr4 1166634 1166812 -183121850 + (CCCCAG)n Simple_repeat Simple_repeat 1 178 0 * 449 254 0 28 chr4 1166698 1166879 -183121783 + C-rich Low_complexity Low_complexity 4 179 0 1571 179 3 7 chr4 1168647 1168943 -183119719 + AluJo SINE Alu 1 295 -17 731 175 0 32 chr4 1169204 1169330 -183119332 + FRAM SINE Alu 38 159 -17 417 306 82 100 chr4 1169403 1170396 -183118266 + L1M4c LINE L1 800 1209 -1566 2282 81 0 0 chr4 1170396 1170693 -183117969 + AluY SINE Alu 1 297 -14 417 306 82 100 chr4 1170693 1171120 -183117542 + L1M4c LINE L1 1209 1642 -1133 2223 93 27 0 chr4 1172514 1172815 -183115847 - AluSc SINE Alu 0 309 1 23 110 0 0 chr4 1174561 1174661 -183114001 + GC_rich Low_complexity Low_complexity 1 100 0 1936 67 4 0 chr4 1180171 1180411 -183108251 - AluSg SINE Alu -69 241 1 1485 184 52 10 chr4 1182224 1182512 -183106150 + AluJo SINE Alu 1 300 -12 1802 159 3 20 chr4 1182843 1183144 -183105518 + AluJo SINE Alu 1 296 -16 209 269 60 18 chr4 1184745 1184912 -183103750 + (TCTCTG)n Simple_repeat Simple_repeat 4 177 0 235 294 49 12 chr4 1185699 1185862 -183102800 + (CGGGG)n Simple_repeat Simple_repeat 2 170 0 227 264 55 22 chr4 1188152 1188243 -183100419 - L1ME LINE L1 -450 5712 5619 1913 259 63 23 chr4 1188390 1188761 -183099901 - L1ME2 LINE L1 -8 6225 5870 2054 93 0 0 chr4 1188761 1189020 -183099642 - AluSc SINE Alu -50 259 1 1913 259 63 23 chr4 1189020 1189373 -183099289 - L1ME2 LINE L1 -363 5870 5472 1456 281 52 38 chr4 1189485 1190114 -183098548 - L1ME2 LINE L1 -942 5273 4631 1525 219 84 30 chr4 1190114 1190483 -183098179 - MLT1B LTR MaLR -1 389 1 1456 281 52 38 chr4 1190483 1190560 -183098102 - L1ME2 LINE L1 -1584 4631 4557 1843 88 0 4 chr4 1190588 1190826 -183097836 + AluSg SINE Alu 55 291 -19 710 274 81 27 chr4 1190828 1191237 -183097425 - L1ME2 LINE L1 -4603 1793 1363 2212 120 0 0 chr4 1191296 1191597 -183097065 + AluSx SINE Alu 1 301 -11 367 291 195 42 chr4 1191647 1191980 -183096682 - L2 LINE L2 -7 3306 2923 798 291 112 3 chr4 1192031 1192371 -183096291 - L2 LINE L2 -518 2796 2420 2163 79 0 0 chr4 1192399 1192676 -183095986 + AluSx SINE Alu 14 290 -22 259 396 7 21 chr4 1197745 1197889 -183090773 - MIR SINE MIR -20 242 101 25 0 0 0 chr4 1199246 1199271 -183089391 + AT_rich Low_complexity Low_complexity 1 25 0 437 215 47 0 chr4 1202241 1202348 -183086314 - LTR45 LTR ERV1 0 525 414 359 262 12 0 chr4 1202362 1202446 -183086216 - LTR45 LTR ERV1 -440 85 1 183 156 0 0 chr4 1207360 1207392 -183081270 + (TG)n Simple_repeat Simple_repeat 1 32 0 342 264 23 0 chr4 1207748 1207835 -183080827 - MER58A DNA MER1_type -18 89 1 315 0 0 0 chr4 1208358 1208393 -183080269 + (TG)n Simple_repeat Simple_repeat 2 36 0 1958 140 90 29 chr4 1208592 1208935 -183079727 - THE1B LTR MaLR 0 364 1 264 329 25 6 chr4 1209179 1209337 -183079325 - L1M4 LINE L1 -3772 2374 2214 318 398 59 5 chr4 1210103 1210289 -183078373 - HAL1 LINE L1 -838 1669 1474 2288 65 45 17 chr4 1210290 1210642 -183078020 - MLT2A1 LTR ERVL -69 375 14 755 280 0 11 chr4 1212163 1212352 -183076310 + MER5A DNA MER1_type 1 187 -2 1003 185 17 0 chr4 1212385 1212563 -183076099 + AluSg/x SINE Alu 130 310 0 199 330 11 34 chr4 1212884 1212972 -183075690 - MIR SINE MIR -157 105 20 506 157 24 0 chr4 1213073 1213156 -183075506 - AluJ/FRAM SINE Alu -8 304 220 300 424 8 4 chr4 1214059 1214302 -183074360 + MIR SINE MIR 8 251 -11 742 174 134 40 chr4 1214477 1214678 -183073984 + L1M4 LINE L1 5402 5621 -563 1024 144 0 0 chr4 1414707 1414853 -182873809 + AluJo/FRAM SINE Alu 131 276 -36 281 26 26 0 chr4 1414860 1414898 -182873764 + (TAA)n Simple_repeat Simple_repeat 2 40 0 2078 83 4 7 chr4 1414916 1415193 -182873469 + AluSx SINE Alu 26 301 -11 256 268 89 18 chr4 1419465 1419577 -182869085 - MLT1K LTR MaLR -2 586 467 274 282 39 0 chr4 1419654 1419732 -182868930 - MLT1K LTR MaLR -342 246 166 352 341 112 25 chr4 1419839 1420070 -182868592 + L2 LINE L2 2973 3239 -74 2080 127 10 0 chr4 1420070 1420403 -182868259 - AluSx SINE Alu 0 312 1 352 341 112 25 chr4 1420403 1420485 -182868177 + L2 LINE L2 3239 3313 0 635 215 6 0 chr4 1420485 1420657 -182868005 + (TGGA)n Simple_repeat Simple_repeat 2 174 0 790 208 6 1 chr4 1420682 1421383 -182867279 + (TGGA)n Simple_repeat Simple_repeat 1 704 0 972 200 9 5 chr4 1421416 1421862 -182866800 + (TGGA)n Simple_repeat Simple_repeat 1 448 0 426 304 93 20 chr4 1422221 1422468 -182866194 - L2 LINE L2 -205 3108 2844 334 273 161 14 chr4 1422561 1422847 -182865815 - L2 LINE L2 -739 2575 2248 205 188 0 42 chr4 1423516 1423564 -182865098 + G-rich Low_complexity Low_complexity 6 51 0 317 324 20 7 chr4 1425535 1425683 -182862979 + (TGGA)n Simple_repeat Simple_repeat 3 152 0 583 314 144 14 chr4 1426408 1426484 -182862178 - L1MC4a LINE L1 -1586 6222 6157 2061 138 7 0 chr4 1426484 1426788 -182861874 + AluJb SINE Alu 1 306 -6 583 314 144 14 chr4 1426788 1426988 -182861674 - L1MC4a LINE L1 -1651 6157 5910 678 292 33 30 chr4 1427134 1427435 -182861227 - L1MC4a LINE L1 -2209 5599 5298 1272 112 6 0 chr4 1427523 1427702 -182860960 - AluSg/x SINE Alu -15 297 118 474 114 0 0 chr4 1427702 1427772 -182860890 - Alu SINE Alu -9 303 234 1397 193 4 40 chr4 1477807 1477989 -182810673 - AluJo SINE Alu -13 299 129 2523 63 3 3 chr4 1477989 1478290 -182810372 + AluY SINE Alu 1 301 -10 1397 193 4 40 chr4 1478290 1478382 -182810280 - AluJo SINE Alu -183 129 35 266 278 81 40 chr4 1479211 1479384 -182809278 - L2 LINE L2 -179 3093 2914 1952 99 0 8 chr4 1479588 1479840 -182808822 + AluSg SINE Alu 55 304 -6 1799 119 0 4 chr4 1479907 1480160 -182808502 - AluSg SINE Alu -3 307 56 4535 77 0 13 chr4 1480191 1480448 -182808214 - LTR10C LTR ERV1 0 591 332 2408 75 0 13 chr4 1480448 1480755 -182807907 - AluY SINE Alu -8 303 1 4535 77 0 13 chr4 1480755 1481096 -182807566 - LTR10C LTR ERV1 -259 332 1 276 300 192 23 chr4 1481511 1481641 -182807021 - MIR SINE MIR -51 211 60 2170 89 7 33 chr4 1481705 1482007 -182806655 - AluSq SINE Alu -19 294 1 2120 129 0 0 chr4 1482548 1482835 -182805827 - AluSg SINE Alu -23 287 1 2403 98 0 3 chr4 1483705 1484011 -182804651 - AluY SINE Alu -6 305 1 2178 118 3 13 chr4 1484259 1484564 -182804098 - AluSx SINE Alu -10 302 1 23 0 0 0 chr4 1484682 1484705 -182803957 + AT_rich Low_complexity Low_complexity 1 23 0 852 187 177 5 chr4 1484785 1484983 -182803679 + AluSg/x SINE Alu 65 296 -13 693 148 0 43 chr4 1485021 1485136 -182803526 - AluSg/x SINE Alu -125 187 78 1359 152 9 5 chr4 1485136 1485347 -182803315 - AluSx SINE Alu -100 212 1 780 90 57 0 chr4 1485348 1485470 -182803192 - L1MA8 LINE L1 -47 6244 6116 345 278 86 48 chr4 1485483 1485522 -182803140 - L1M4 LINE L1 -813 5333 5297 2237 136 0 0 chr4 1485522 1485832 -182802830 - AluSx SINE Alu -2 310 1 1596 175 73 0 chr4 1485836 1486110 -182802552 - AluJb SINE Alu -18 294 1 345 278 86 48 chr4 1486110 1486274 -182802388 - L1M4 LINE L1 -851 5295 5117 1909 139 42 0 chr4 1486301 1486421 -182802241 + AluSx SINE Alu 1 115 -197 210 37 0 0 chr4 1486421 1486448 -182802214 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1909 139 42 0 chr4 1486448 1486614 -182802048 + AluSx SINE Alu 115 299 -13 314 371 59 8 chr4 1486811 1487067 -182801595 - L1MC4 LINE L1 -1006 7036 6768 822 177 15 0 chr4 1487113 1487243 -182801419 - AluSq/x SINE Alu -180 132 1 846 160 0 0 chr4 1487305 1487430 -182801232 + FLAM_C SINE Alu 1 125 -18 2264 85 3 0 chr4 1487434 1487729 -182800933 - AluSp SINE Alu -17 296 1 1824 144 34 0 chr4 1487861 1488152 -182800510 - AluJo SINE Alu -11 301 1 228 285 46 54 chr4 1488793 1488923 -182799739 - MIR SINE MIR -62 146 18 325 278 11 30 chr4 1489176 1489323 -182799339 - L1MC3 LINE L1 0 7783 6207 294 231 0 0 chr4 1489332 1489384 -182799278 - MLT1C LTR MaLR 0 467 416 372 328 87 18 chr4 1491409 1491638 -182797024 - L1MC4 LINE L1 -93 7949 7705 2055 82 43 4 chr4 1491655 1491935 -182796727 - AluSc SINE Alu -5 304 14 1110 153 16 0 chr4 1492908 1493098 -182795564 + AluJb SINE Alu 120 312 0 21 0 0 0 chr4 1493376 1493397 -182795265 + GC_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr4 1493933 1493962 -182794700 + GC_rich Low_complexity Low_complexity 1 29 0 315 196 9 103 chr4 1494045 1494152 -182794510 + MER53 DNA DNA 93 189 0 187 360 10 20 chr4 1494394 1494494 -182794168 - MIR SINE MIR -78 184 86 2050 97 20 17 chr4 1495116 1495415 -182793247 + AluSq SINE Alu 1 300 -13 263 224 40 13 chr4 1495522 1495598 -182793064 - MLT1K LTR MaLR -63 525 448 1364 187 128 8 chr4 1495992 1496434 -182792228 + MLT1H LTR MaLR 1 541 -8 196 162 54 0 chr4 1496928 1496965 -182791697 - MER5A DNA MER1_type -87 102 64 1294 147 9 0 chr4 1497110 1497321 -182791341 - AluJo SINE Alu -14 298 86 1436 176 56 18 chr4 1497466 1497632 -182791030 - AluJb SINE Alu -17 295 112 414 0 0 0 chr4 1497632 1497678 -182790984 + (TG)n Simple_repeat Simple_repeat 1 46 0 1436 176 56 18 chr4 1497678 1497795 -182790867 - AluJb SINE Alu -200 112 1 1661 166 0 35 chr4 1498089 1498402 -182790260 + AluJb SINE Alu 1 302 -10 2319 28 0 24 chr4 1498404 1498719 -182789943 + AluY SINE Alu 3 310 0 1799 80 0 16 chr4 1498918 1499167 -182789495 + AluSq SINE Alu 1 245 -68 23 0 0 0 chr4 1499903 1499926 -182788736 + GC_rich Low_complexity Low_complexity 1 23 0 363 235 0 24 chr4 1501198 1501283 -182787379 - MIR SINE MIR -76 132 50 386 267 80 13 chr4 1501525 1501675 -182786987 - MER106B DNA MER1_type -4 1055 896 185 182 164 0 chr4 1501706 1501761 -182786901 - L2 LINE L2 -18 3295 3232 10379 117 56 114 chr4 1501810 1501973 -182786689 + Tigger1 DNA MER2_type 26 197 -2221 2151 116 0 3 chr4 1501973 1502276 -182786386 - AluSx SINE Alu -10 302 1 10379 117 56 114 chr4 1502276 1503480 -182785182 + Tigger1 DNA MER2_type 197 1470 -948 765 125 0 97 chr4 1503480 1503624 -182785038 + FLAM_C SINE Alu 2 131 -12 10379 117 56 114 chr4 1503624 1503766 -182784896 + Tigger1 DNA MER2_type 1470 1619 -799 2265 80 3 0 chr4 1503766 1504065 -182784597 + AluY SINE Alu 3 302 -9 10379 117 56 114 chr4 1504065 1504111 -182784551 + Tigger1 DNA MER2_type 1619 1666 -752 1994 112 7 7 chr4 1504111 1504397 -182784265 + AluSx SINE Alu 8 293 -19 10379 117 56 114 chr4 1504397 1504535 -182784127 + Tigger1 DNA MER2_type 1666 1810 -608 1956 98 25 7 chr4 1504535 1504820 -182783842 + AluSg1 SINE Alu 1 290 -19 1550 141 0 34 chr4 1504829 1505091 -182783571 + AluSx SINE Alu 42 294 -18 2106 98 0 23 chr4 1505092 1505397 -182783265 + AluSg SINE Alu 1 298 -12 10379 117 56 114 chr4 1505397 1505739 -182782923 + Tigger1 DNA MER2_type 1818 2080 -338 2220 95 0 7 chr4 1505739 1506043 -182782619 + AluSp SINE Alu 1 302 -11 10379 117 56 114 chr4 1506043 1506165 -182782497 + Tigger1 DNA MER2_type 2080 2208 -210 1030 172 17 67 chr4 1506165 1506328 -182782334 - AluJo SINE Alu -13 299 129 243 0 0 0 chr4 1506328 1506355 -182782307 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2194 78 0 0 chr4 1506355 1506638 -182782024 - AluY SINE Alu -28 283 1 1030 172 17 67 chr4 1506638 1506711 -182781951 - AluJo SINE Alu -181 131 74 425 245 86 15 chr4 1506765 1506919 -182781743 - MIR SINE MIR -83 179 16 2151 99 10 3 chr4 1507388 1507691 -182780971 - AluSg SINE Alu -5 305 1 509 209 0 26 chr4 1507701 1507816 -182780846 - FAM SINE Alu -2 183 72 327 256 34 0 chr4 1507816 1507846 -182780816 - AluJo/F(R)AM SINE Alu -78 224 196 1640 128 0 0 chr4 1507846 1508081 -182780581 - AluSx SINE Alu -77 235 1 327 256 34 0 chr4 1508081 1508151 -182780511 - AluJo/F(R)AM SINE Alu -106 196 154 2135 112 52 60 chr4 1508151 1508304 -182780358 + THE1B LTR MaLR 1 154 -210 1998 136 3 0 chr4 1508304 1508598 -182780064 + AluSg SINE Alu 1 295 -15 2135 112 52 60 chr4 1508598 1508811 -182779851 + THE1B LTR MaLR 154 364 0 12088 89 8 6 chr4 1508811 1510389 -182778273 + THE1B-int LTR MaLR 1 1580 0 2317 92 66 20 chr4 1510389 1510737 -182777925 + THE1B LTR MaLR 1 364 0 1565 124 14 58 chr4 1510966 1511241 -182777421 - AluJb SINE Alu -49 263 1 2092 121 0 0 chr4 1511268 1511557 -182777105 - AluSx SINE Alu -9 303 15 1362 139 0 9 chr4 1512708 1512924 -182775738 - AluJb SINE Alu -14 298 85 360 335 54 6 chr4 1514067 1514234 -182774428 + L2 LINE L2 3139 3313 0 213 211 57 0 chr4 1514319 1514383 -182774279 - MIR SINE MIR -69 139 70 2048 125 0 0 chr4 1514523 1514811 -182773851 + AluSx SINE Alu 4 291 -21 566 139 73 73 chr4 1514828 1514912 -182773750 - FLAM_C SINE Alu -174 138 52 234 0 0 0 chr4 1514912 1514938 -182773724 + (C)n Simple_repeat Simple_repeat 1 26 0 566 139 73 73 chr4 1514938 1514990 -182773672 - FLAM_C SINE Alu -259 53 2 292 162 88 0 chr4 1515356 1515424 -182773238 + Tigger5 DNA MER2_type 2250 2323 0 188 355 81 17 chr4 1515647 1515819 -182772843 + L2 LINE L2 2569 2751 -563 185 289 289 0 chr4 1516601 1516691 -182771971 - L2 LINE L2 0 3313 3198 197 294 128 0 chr4 1516712 1516814 -182771848 - L2 LINE L2 -875 2439 2325 533 275 54 45 chr4 1516873 1517095 -182771567 + MIR SINE MIR 7 230 -32 1382 184 0 44 chr4 1518010 1518135 -182770527 - AluJb SINE Alu -53 259 130 2126 115 0 7 chr4 1518135 1518440 -182770222 - AluSx SINE Alu -1 311 9 1382 184 0 44 chr4 1518440 1518585 -182770077 - AluJb SINE Alu -182 130 1 1956 97 39 4 chr4 1519043 1519345 -182769317 + AluSx SINE Alu 1 312 0 555 279 60 44 chr4 1519476 1519661 -182769001 - MIR SINE MIR -6 256 64 1955 104 28 17 chr4 1519661 1519979 -182768683 - AluSq SINE Alu 0 313 1 555 279 60 44 chr4 1519979 1520044 -182768618 - MIR SINE MIR -198 64 2 282 206 404 22 chr4 1520320 1520456 -182768206 + MER5A DNA MER1_type 1 188 -1 1230 171 93 8 chr4 1521687 1521944 -182766718 + AluJo SINE Alu 1 279 -33 1286 155 5 0 chr4 1522103 1522316 -182766346 - AluSg/x SINE Alu -12 300 87 1878 117 57 0 chr4 1522317 1522600 -182766062 - AluSq SINE Alu -14 299 1 360 152 0 0 chr4 1522601 1522667 -182765995 - Alu SINE Alu -3 299 234 30 69 0 0 chr4 1723909 1723967 -182564695 + GC_rich Low_complexity Low_complexity 1 58 0 298 284 34 0 chr4 1724774 1724862 -182563800 + L2 LINE L2 3223 3313 0 330 221 147 30 chr4 1727577 1727711 -182560951 + MIR SINE MIR 14 160 -61 333 332 27 76 chr4 1729983 1730206 -182558456 - L1MCa LINE L1 -4002 2642 2431 280 281 21 0 chr4 1731240 1731336 -182557326 - MLT1C LTR MaLR -40 427 330 237 206 0 55 chr4 1731359 1731432 -182557230 - MLT1C LTR MaLR -222 152 84 1377 65 45 10 chr4 1733470 1733669 -182554993 + AluY SINE Alu 106 311 0 331 346 39 82 chr4 1736771 1737077 -182551585 - L1MCa LINE L1 -5062 1480 1188 767 124 0 0 chr4 1742651 1742756 -182545906 + AluJo/FLAM SINE Alu 6 110 -202 1552 70 0 0 chr4 1742758 1742945 -182545717 - AluSp SINE Alu -19 294 108 2120 130 0 0 chr4 1743208 1743508 -182545154 - AluJo SINE Alu -12 300 1 732 254 10 38 chr4 1745621 1745743 -182542919 + MLT1A1 LTR MaLR 163 278 -87 2394 61 3 0 chr4 1745743 1746038 -182542624 - AluY SINE Alu -15 296 1 732 254 10 38 chr4 1746038 1746124 -182542538 + MLT1A1 LTR MaLR 278 365 0 2124 114 7 3 chr4 1746692 1746999 -182541663 + AluSx SINE Alu 1 308 -4 211 367 8 0 chr4 1747315 1747443 -182541219 + (TG)n Simple_repeat Simple_repeat 1 129 0 1621 188 7 10 chr4 1747568 1747866 -182540796 + AluJo SINE Alu 3 299 -13 1962 120 0 0 chr4 1748469 1748744 -182539918 + AluSq SINE Alu 1 275 -38 543 227 0 0 chr4 1748749 1748877 -182539785 + G-rich Low_complexity Low_complexity 4 131 0 207 204 0 0 chr4 1748879 1748928 -182539734 + GA-rich Low_complexity Low_complexity 1 49 0 499 289 127 9 chr4 1749082 1749310 -182539352 + MLT1F1 LTR MaLR 32 286 -281 850 120 0 0 chr4 1751328 1751445 -182537217 + AluSg/x SINE Alu 174 290 -20 2276 94 0 0 chr4 1752069 1752376 -182536286 + AluY SINE Alu 1 307 -4 2010 144 0 10 chr4 1752419 1752554 -182536108 + AluJb SINE Alu 1 136 -176 2353 54 30 0 chr4 1752554 1752852 -182535810 + AluY SINE Alu 1 307 -4 2010 144 0 10 chr4 1752852 1753028 -182535634 + AluJb SINE Alu 136 309 -3 259 211 40 26 chr4 1754231 1754307 -182534355 + G-rich Low_complexity Low_complexity 3 79 0 224 254 42 14 chr4 1758438 1758509 -182530153 + MIR SINE MIR 111 183 -79 21 0 0 0 chr4 1759003 1759024 -182529638 + AT_rich Low_complexity Low_complexity 1 21 0 707 175 83 0 chr4 1759888 1760008 -182528654 + FLAM_C SINE Alu 2 131 -2 1038 255 163 12 chr4 1761455 1761878 -182526784 + MLT1D LTR MaLR 2 488 -17 328 233 17 58 chr4 1762010 1762130 -182526532 - LTR33 LTR ERVL -363 158 44 1946 127 7 0 chr4 1762493 1762776 -182525886 + AluSx SINE Alu 15 299 -13 2157 47 0 0 chr4 1763587 1763844 -182524818 - AluY SINE Alu -53 258 2 228 196 185 0 chr4 1770189 1770281 -182518381 - L2 LINE L2 -305 3008 2900 444 311 96 47 chr4 1770604 1770698 -182517964 + L1M4 LINE L1 2682 2770 -3376 2466 58 0 13 chr4 1770698 1771008 -182517654 + AluY SINE Alu 1 306 -5 444 311 96 47 chr4 1771008 1771266 -182517396 + L1M4 LINE L1 2770 3014 -3132 1820 169 0 7 chr4 1771266 1771567 -182517095 + AluJo SINE Alu 1 299 -13 444 311 96 47 chr4 1771567 1771915 -182516747 + L1M4 LINE L1 3014 3343 -2803 2312 93 0 6 chr4 1771915 1772226 -182516436 - AluSq SINE Alu -4 309 1 444 311 96 47 chr4 1772226 1772375 -182516287 + L1M4 LINE L1 3343 3679 -2467 240 333 70 34 chr4 1773168 1773582 -182515080 - L1M4c LINE L1 -2919 3463 3035 377 362 0 18 chr4 1773742 1773905 -182514757 + (TG)n Simple_repeat Simple_repeat 1 160 0 265 353 6 18 chr4 1773940 1774107 -182514555 + (TG)n Simple_repeat Simple_repeat 2 166 0 1214 238 18 13 chr4 1774343 1774651 -182514011 - MLT1B LTR MaLR -7 460 75 2127 120 0 3 chr4 1774656 1774956 -182513706 - AluSx SINE Alu -13 299 1 369 339 110 33 chr4 1774959 1775216 -182513446 - L1M4c LINE L1 -4841 1543 1288 895 205 0 0 chr4 1775774 1775940 -182512722 - AluJb SINE Alu -10 302 137 610 231 134 17 chr4 1775943 1776181 -182512481 - L1MB5 LINE L1 -27 6147 5882 453 267 48 0 chr4 1776367 1776532 -182512130 + MER58A DNA MER1_type 3 175 -49 225 114 0 0 chr4 1777063 1777098 -182511564 - Alu SINE Alu -62 71 37 2228 94 3 13 chr4 1778817 1779116 -182509546 + AluSp SINE Alu 1 296 -17 23 0 0 0 chr4 1779519 1779542 -182509120 + GC_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr4 1779737 1779760 -182508902 + GC_rich Low_complexity Low_complexity 1 23 0 23 0 0 0 chr4 1779849 1779872 -182508790 + GC_rich Low_complexity Low_complexity 1 23 0 283 209 104 0 chr4 1781785 1781978 -182506684 + (CGGGG)n Simple_repeat Simple_repeat 1 213 0 237 159 29 14 chr4 1785570 1785639 -182503023 + G-rich Low_complexity Low_complexity 3 72 0 2252 89 16 0 chr4 1792115 1792290 -182496372 - AluSx SINE Alu -4 308 124 2132 86 0 4 chr4 1792290 1792569 -182496093 - AluY SINE Alu -13 298 21 2252 89 16 0 chr4 1792569 1792696 -182495966 - AluSx SINE Alu -188 124 1 444 247 12 29 chr4 1794816 1794986 -182493676 + GA-rich Low_complexity Low_complexity 5 171 0 202 35 0 0 chr4 1795015 1795044 -182493618 + L2 LINE L2 3028 3056 -216 22 35 0 0 chr4 1795942 1795971 -182492691 + AT_rich Low_complexity Low_complexity 1 29 0 188 67 33 0 chr4 1796580 1796610 -182492052 + (TA)n Simple_repeat Simple_repeat 2 32 0 303 28 0 0 chr4 1797084 1797120 -182491542 + (CA)n Simple_repeat Simple_repeat 1 36 0 23 0 0 0 chr4 1798666 1798689 -182489973 + GC_rich Low_complexity Low_complexity 1 23 0 201 159 0 0 chr4 1802644 1802688 -182485974 + C-rich Low_complexity Low_complexity 2 45 0 414 309 92 32 chr4 1805324 1805606 -182483056 - MER58B DNA MER1_type 0 341 43 206 341 143 0 chr4 1808133 1808224 -182480438 - MIR SINE MIR -51 211 108 24 53 0 0 chr4 1808985 1809023 -182479639 + GC_rich Low_complexity Low_complexity 1 38 0 25 0 0 0 chr4 1809360 1809385 -182479277 + GC_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr4 1809407 1809435 -182479227 + GC_rich Low_complexity Low_complexity 1 28 0 444 79 56 45 chr4 1813460 1813638 -182475024 + (TG)n Simple_repeat Simple_repeat 1 180 0 409 53 77 41 chr4 1813667 1813836 -182474826 + (TG)n Simple_repeat Simple_repeat 1 175 0 558 102 72 23 chr4 1813855 1814300 -182474362 + (TG)n Simple_repeat Simple_repeat 1 466 0 571 85 79 13 chr4 1814321 1814628 -182474034 + (TG)n Simple_repeat Simple_repeat 1 327 0 2167 120 0 0 chr4 1815029 1815328 -182473334 - AluSq SINE Alu -14 299 1 2138 92 7 26 chr4 1815337 1815641 -182473021 - AluSg SINE Alu -12 298 1 2246 104 3 3 chr4 1815782 1816091 -182472571 + AluSx SINE Alu 2 310 -2 210 206 15 84 chr4 1816479 1816610 -182472052 + (CACGC)n Simple_repeat Simple_repeat 2 123 0 274 223 170 0 chr4 1816769 1816881 -182471781 - MLT1A1 LTR MaLR -126 441 311 2334 68 0 7 chr4 1819567 1819863 -182468799 - AluY SINE Alu -17 294 1 27 0 0 0 chr4 1819873 1819900 -182468762 + AT_rich Low_complexity Low_complexity 1 27 0 2079 110 0 32 chr4 1819934 1820244 -182468418 - AluY SINE Alu -11 300 1 1189 211 32 26 chr4 1821603 1821915 -182466747 - MLT1A1 LTR MaLR -48 317 4 1940 110 52 0 chr4 1821939 1822230 -182466432 + AluSq SINE Alu 1 306 -7 1358 179 44 4 chr4 1822266 1822518 -182466144 + AluJb SINE Alu 27 288 -24 2090 88 27 7 chr4 1822532 1822826 -182465836 + AluY SINE Alu 1 300 -11 222 275 0 43 chr4 1822834 1822903 -182465759 + L2 LINE L2 1127 1192 -2122 377 293 60 0 chr4 1823775 1823954 -182464708 + L1MD1 LINE L1 5763 5967 -275 1582 149 0 71 chr4 1823972 1824128 -182464534 + AluJo SINE Alu 1 124 -188 2116 120 7 0 chr4 1824128 1824429 -182464233 + AluSq SINE Alu 5 307 -6 1582 149 0 71 chr4 1824429 1824594 -182464068 + AluJo SINE Alu 124 299 -13 2218 181 5 74 chr4 1824591 1824840 -182463822 + L1M4 LINE L1 5272 5464 -720 2014 93 24 17 chr4 1824840 1825131 -182463531 + AluY SINE Alu 1 293 -18 2218 181 5 74 chr4 1825131 1825435 -182463227 + L1M4 LINE L1 5464 5787 -397 321 312 48 0 chr4 1825466 1825591 -182463071 + MER3 DNA MER1_type 1 131 -78 832 144 0 14 chr4 1825614 1825753 -182462909 + AluJo SINE Alu 1 137 -175 615 236 59 74 chr4 1826048 1826319 -182462343 + L1MC5 LINE L1 7603 7869 -92 2151 122 0 3 chr4 1826623 1826935 -182461727 + AluSx SINE Alu 1 311 -1 2189 101 0 19 chr4 1826960 1827267 -182461395 + AluSx SINE Alu 1 301 -11 1002 151 6 0 chr4 1827273 1827439 -182461223 + AluSg/x SINE Alu 140 306 -6 547 156 249 4 chr4 1827756 1827906 -182460756 + L1PA16 LINE L1 5997 6150 -16 227 83 0 0 chr4 1827903 1827939 -182460723 + L1PA16 LINE L1 6115 6150 -16 * 227 83 0 0 chr4 1828002 1828038 -182460624 + L1PA16 LINE L1 6115 6150 -16 227 83 0 0 chr4 1828067 1828103 -182460559 + L1PA16 LINE L1 6115 6150 -16 227 83 0 0 chr4 1828226 1828262 -182460400 + L1PA16 LINE L1 6115 6150 -16 323 77 0 19 chr4 1828325 1828377 -182460285 + L1PA16 LINE L1 6115 6165 -1 1823 124 27 17 chr4 1828647 1828775 -182459887 + AluSx SINE Alu 1 126 -186 2325 93 0 0 chr4 1828775 1829076 -182459586 + AluSg SINE Alu 1 301 -9 1823 124 27 17 chr4 1829076 1829245 -182459417 + AluSx SINE Alu 126 301 -11 2204 78 7 0 chr4 1830074 1830367 -182458295 - AluSx SINE Alu -17 295 1 364 308 134 32 chr4 1831538 1831785 -182456877 + HAL1 LINE L1 806 1077 -1430 252 216 51 57 chr4 1832783 1832959 -182455703 + (CCCCAG)n Simple_repeat Simple_repeat 3 177 0 211 225 39 77 chr4 1833101 1833283 -182455379 + (CCCCAG)n Simple_repeat Simple_repeat 3 177 0 257 225 62 38 chr4 1833340 1833500 -182455162 + (CCCCAG)n Simple_repeat Simple_repeat 1 164 0 262 160 147 0 chr4 1833825 1833900 -182454762 + L1MC4 LINE L1 6828 6913 -1129 204 311 0 17 chr4 1834131 1834311 -182454351 + (CCCA)n Simple_repeat Simple_repeat 4 180 0 439 295 156 19 chr4 1834391 1834683 -182453979 + L1MC4a LINE L1 7050 7421 -387 2213 112 0 10 chr4 1834683 1834996 -182453666 - AluSx SINE Alu -2 310 1 439 295 156 19 chr4 1834996 1835133 -182453529 + L1MC4a LINE L1 7421 7538 -270 2066 103 0 7 chr4 1835374 1835664 -182452998 + AluSc SINE Alu 1 288 -21 1436 228 45 75 chr4 1835952 1836309 -182452353 - MLT1C LTR MaLR -14 453 112 2291 91 0 0 chr4 1836309 1836605 -182452057 + AluY SINE Alu 1 296 -15 1436 228 45 75 chr4 1836605 1836711 -182451951 - MLT1C LTR MaLR -355 112 4 216 246 49 0 chr4 1836971 1837032 -182451630 - L2 LINE L2 -244 3069 3006 1173 196 21 60 chr4 1838036 1838424 -182450238 - MLT1C LTR MaLR -21 369 3 1524 127 0 0 chr4 1839664 1839884 -182448778 + AluSg/x SINE Alu 79 298 -12 2190 210 33 48 chr4 1839885 1840013 -182448649 + L1MC1 LINE L1 4648 4776 -1370 1220 205 110 0 chr4 1840013 1840276 -182448386 + AluJo SINE Alu 3 294 -18 2190 210 33 48 chr4 1840276 1840461 -182448201 + L1MC1 LINE L1 4776 4962 -1184 2092 127 0 0 chr4 1840461 1840753 -182447909 + AluSx SINE Alu 1 292 -20 2190 210 33 48 chr4 1840753 1841106 -182447556 + L1MC1 LINE L1 4962 5305 -841 1439 123 5 9 chr4 1841108 1841328 -182447334 + AluSg/x SINE Alu 85 303 -9 2184 90 17 0 chr4 1841328 1841628 -182447034 + AluSq SINE Alu 1 305 -8 1792 114 95 0 chr4 1841687 1841960 -182446702 + AluSx SINE Alu 1 299 -13 2377 69 7 0 chr4 1841962 1842266 -182446396 + AluSp SINE Alu 3 308 -5 3380 171 57 26 chr4 1842272 1843008 -182445654 + L1MC1 LINE L1 5431 6257 -76 1657 134 0 4 chr4 1843024 1843271 -182445391 - AluSq SINE Alu -20 293 48 252 65 0 0 chr4 1843271 1843302 -182445360 - LTR13 LTR ERVK -2 1005 975 414 133 0 0 chr4 1843303 1843363 -182445299 - AluJ/FLAM SINE Alu -252 60 1 1491 127 0 25 chr4 1843487 1843724 -182444938 - AluJb SINE Alu -81 231 1 241 284 47 112 chr4 1843840 1844072 -182444590 + MIR SINE MIR 16 232 -30 2318 94 0 0 chr4 1844174 1844483 -182444179 - AluSc SINE Alu 0 309 1 701 93 28 0 chr4 1845344 1845452 -182443210 - HY1 scRNA scRNA -1 111 1 232 185 59 25 chr4 1846248 1846367 -182442295 + (CCG)n Simple_repeat Simple_repeat 1 123 0 2252 75 19 7 chr4 1847960 1848268 -182440394 + AluSq SINE Alu 1 312 -1 256 226 12 0 chr4 1848543 1848611 -182440051 - MIR SINE MIR -59 149 94 1109 175 137 0 chr4 1848895 1849157 -182439505 + L1MB5 LINE L1 5877 6174 0 2265 101 0 0 chr4 1849164 1849471 -182439191 + AluSg SINE Alu 1 307 -3 348 205 0 12 chr4 1849628 1849711 -182438951 - L1M4 LINE L1 -3541 2605 2524 2429 62 0 3 chr4 1849711 1850018 -182438644 - AluY SINE Alu -3 308 3 2028 222 83 54 chr4 1850020 1850057 -182438605 - L1M4 LINE L1 -945 5201 5167 1769 142 0 68 chr4 1850057 1850228 -182438434 - AluJo SINE Alu -10 302 121 207 0 0 0 chr4 1850228 1850251 -182438411 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1998 98 29 0 chr4 1850251 1850528 -182438134 - AluSp SINE Alu -28 285 1 2069 111 10 0 chr4 1850535 1850832 -182437830 - AluSp SINE Alu -13 300 1 1769 142 0 68 chr4 1850832 1850975 -182437687 - AluJo SINE Alu -196 116 1 2028 222 83 54 chr4 1850975 1851247 -182437415 - L1M4 LINE L1 -979 5167 4904 2418 72 3 0 chr4 1851247 1851554 -182437108 - AluY SINE Alu -3 308 1 2028 222 83 54 chr4 1851554 1851861 -182436801 - L1M4 LINE L1 -1242 4904 4607 2087 115 3 3 chr4 1851861 1852157 -182436505 - AluSx SINE Alu -15 297 2 2252 90 7 0 chr4 1852166 1852465 -182436197 - AluSp SINE Alu -12 301 1 2028 222 83 54 chr4 1852465 1852610 -182436052 - L1M4 LINE L1 -1546 4600 4406 201 74 0 0 chr4 1852717 1852744 -182435918 + (CA)n Simple_repeat Simple_repeat 1 27 0 1495 135 41 4 chr4 1853178 1853423 -182435239 + AluSx SINE Alu 1 254 -58 2043 125 16 0 chr4 1854266 1854571 -182434091 + AluSp SINE Alu 1 310 -3 2030 132 0 0 chr4 1855991 1856286 -182432376 - AluSx SINE Alu -16 296 2 2096 125 3 0 chr4 1856292 1856595 -182432067 - AluSx SINE Alu -8 304 1 1799 119 81 0 chr4 1857422 1857707 -182430955 + AluSg SINE Alu 1 308 -2 184 67 0 67 chr4 1857825 1857870 -182430792 + (CAAAAA)n Simple_repeat Simple_repeat 2 43 0 714 191 23 23 chr4 1858367 1858498 -182430164 + FLAM_C SINE Alu 3 133 0 2147 107 3 0 chr4 1858520 1858820 -182429842 + AluSx SINE Alu 1 301 -11 1467 169 0 8 chr4 1858833 1859088 -182429574 + AluSx SINE Alu 55 307 -5 2110 105 7 3 chr4 1859088 1859392 -182429270 + AluSx SINE Alu 1 306 -6 25 0 0 0 chr4 1859424 1859449 -182429213 + AT_rich Low_complexity Low_complexity 1 25 0 2117 86 10 10 chr4 1859459 1859749 -182428913 + AluSp SINE Alu 1 290 -23 1223 178 53 76 chr4 1859758 1859980 -182428682 + AluJo SINE Alu 2 217 -95 1658 123 100 0 chr4 1859980 1860241 -182428421 + AluSg SINE Alu 1 287 -23 1223 178 53 76 chr4 1860241 1860322 -182428340 + AluJo SINE Alu 217 298 -14 2109 110 0 0 chr4 1860390 1860682 -182427980 - AluY SINE Alu -19 292 1 1546 172 46 11 chr4 1860692 1860977 -182427685 - AluJo SINE Alu -17 295 1 1073 232 84 62 chr4 1862085 1862463 -182426199 - MER119 DNA MER1_type -64 519 128 1467 171 23 37 chr4 1862463 1862762 -182425900 - AluJo SINE Alu -17 295 1 1073 232 84 62 chr4 1862762 1862822 -182425840 - MER119 DNA MER1_type -455 128 71 379 224 10 31 chr4 1862868 1862966 -182425696 + MER105 DNA DNA 66 161 -43 2288 81 3 3 chr4 1863032 1863340 -182425322 - AluSp SINE Alu 0 313 6 2099 131 0 0 chr4 1863523 1863829 -182424833 + AluSx SINE Alu 1 306 -6 2154 91 34 0 chr4 1864863 1865159 -182423503 + AluSg SINE Alu 1 306 -4 721 181 129 23 chr4 1865244 1865415 -182423247 - MER5A DNA MER1_type 0 189 1 707 163 7 71 chr4 1865685 1865826 -182422836 + AluJo SINE Alu 5 136 -176 2135 120 3 0 chr4 1866826 1867127 -182421535 - AluSp SINE Alu -9 304 3 917 188 33 0 chr4 1867713 1867894 -182420768 + AluJb SINE Alu 103 289 -23 1696 140 21 11 chr4 1867913 1868198 -182420464 + AluSx SINE Alu 10 297 -15 1518 136 19 76 chr4 1868434 1868751 -182419911 + AluSx SINE Alu 9 307 -5 1760 107 80 50 chr4 1868755 1868840 -182419822 + AluSx SINE Alu 3 84 -228 2784 13 0 0 chr4 1868840 1869153 -182419509 + AluYb8 SINE Alu 1 313 -5 1760 107 80 50 chr4 1869153 1869366 -182419296 + AluSx SINE Alu 84 310 -2 1720 143 10 31 chr4 1869518 1869657 -182419005 + AluSg SINE Alu 1 141 -169 2280 99 0 0 chr4 1869657 1869959 -182418703 + AluSg SINE Alu 6 307 -3 1720 143 10 31 chr4 1869959 1870112 -182418550 + AluSg SINE Alu 141 287 -23 223 260 61 21 chr4 1870693 1870837 -182417825 - L2 LINE L2 -363 2951 2732 1467 86 15 0 chr4 1870915 1871113 -182417549 - AluSp SINE Alu -6 307 107 3318 90 96 29 chr4 1871113 1871467 -182417195 + LTR14 LTR ERVK 2 402 -146 2296 71 10 0 chr4 1871467 1871764 -182416898 - AluY SINE Alu -11 300 1 3318 90 96 29 chr4 1871764 1871922 -182416740 + LTR14 LTR ERVK 402 548 0 825 97 0 0 chr4 1871922 1872035 -182416627 - AluSp SINE Alu -200 113 1 535 268 153 25 chr4 1872037 1872284 -182416378 + L2 LINE L2 2192 2503 -811 2278 119 112 52 chr4 1872284 1872624 -182416038 - MER4C LTR ERV1 0 465 92 2251 100 0 3 chr4 1872624 1872933 -182415729 + AluSx SINE Alu 1 308 -4 2278 119 112 52 chr4 1872933 1873030 -182415632 - MER4C LTR ERV1 -373 92 2 535 268 153 25 chr4 1873030 1873148 -182415514 + L2 LINE L2 2503 2604 -710 255 196 41 31 chr4 1874036 1874133 -182414529 + (CAGGG)n Simple_repeat Simple_repeat 4 101 0 27 49 0 0 chr4 1874206 1874247 -182414415 + GC_rich Low_complexity Low_complexity 1 41 0 22 0 0 0 chr4 1874445 1874467 -182414195 + GC_rich Low_complexity Low_complexity 1 22 0 282 212 0 30 chr4 1874768 1874834 -182413828 + MLT1F1 LTR MaLR 504 567 0 356 133 13 67 chr4 1875450 1875472 -182413190 + MER49 LTR ERV1 1 23 -900 2011 108 35 0 chr4 1875472 1875759 -182412903 + AluSp SINE Alu 1 297 -16 356 133 13 67 chr4 1875759 1875811 -182412851 + MER49 LTR ERV1 23 71 -852 * 997 125 54 6 chr4 1875810 1875978 -182412684 + MER49 LTR ERV1 221 396 -527 667 181 22 58 chr4 1875979 1876117 -182412545 + AluJo/FLAM SINE Alu 1 133 -179 1912 149 3 3 chr4 1876117 1876412 -182412250 + AluJo SINE Alu 1 295 -17 1619 124 45 30 chr4 1876417 1876823 -182411839 + MER49 LTR ERV1 391 859 -64 751 90 20 0 chr4 1876829 1876929 -182411733 - AluSg/x SINE Alu -20 289 188 216 254 18 0 chr4 1877013 1877068 -182411594 + L2 LINE L2 3209 3264 -8 474 171 51 0 chr4 1880894 1881011 -182407651 + L1MC4 LINE L1 6889 7011 -1031 1775 78 130 11 chr4 1881129 1881399 -182407263 + AluSc SINE Alu 1 302 -7 21 0 0 0 chr4 1882724 1882745 -182405917 + GC_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr4 1882780 1882809 -182405853 + GC_rich Low_complexity Low_complexity 1 29 0 25 0 0 0 chr4 1882826 1882851 -182405811 + GC_rich Low_complexity Low_complexity 1 25 0 226 149 0 21 chr4 1883465 1883512 -182405150 + (CCCCG)n Simple_repeat Simple_repeat 3 48 0 191 262 0 0 chr4 1884129 1884171 -182404491 + L2 LINE L2 2430 2471 -843 2258 76 0 13 chr4 1885738 1886041 -182402621 - AluY SINE Alu -12 299 1 1373 70 0 16 chr4 1886149 1886335 -182402327 - AluY SINE Alu -2 309 127 977 155 7 0 chr4 1886541 1886696 -182401966 - AluJb SINE Alu -23 289 134 2284 82 7 3 chr4 1886696 1887001 -182401661 - AluSp SINE Alu -7 306 1 665 215 20 51 chr4 1888517 1888617 -182400045 + MER54B LTR ERVL 494 587 -206 2149 103 10 13 chr4 1888617 1888928 -182399734 + AluSq SINE Alu 2 311 -2 665 215 20 51 chr4 1888928 1889022 -182399640 + MER54B LTR ERVL 587 682 -111 717 191 106 11 chr4 1889235 1889423 -182399239 + MER54A LTR ERVL 669 874 -27 6371 112 52 20 chr4 1890997 1891765 -182396897 - LTR13 LTR ERVK 0 1007 200 2249 72 10 7 chr4 1891765 1892069 -182396593 - AluY SINE Alu -5 306 2 6371 112 52 20 chr4 1892069 1892276 -182396386 - LTR13 LTR ERVK -807 200 1 2038 116 14 0 chr4 1893374 1893667 -182394995 - AluSx SINE Alu -15 297 1 1565 267 107 2 chr4 1894438 1895019 -182393643 - L1MB7 LINE L1 -265 5919 5278 1575 173 35 35 chr4 1895107 1895419 -182393243 + AluJo SINE Alu 1 312 0 2288 105 3 0 chr4 1895429 1895734 -182392928 + AluSx SINE Alu 1 306 -6 2183 118 0 0 chr4 1895925 1896221 -182392441 - AluSx SINE Alu -16 296 1 536 186 31 0 chr4 1896241 1896338 -182392324 + AluJo SINE Alu 38 137 -175 324 206 0 0 chr4 1896339 1896407 -182392255 - L1MB7 LINE L1 -1116 5030 4963 1114 175 113 0 chr4 1896409 1896638 -182392024 - AluJb SINE Alu -16 296 42 324 233 186 0 chr4 1896707 1896836 -182391826 + MER20 DNA MER1_type 2 154 -65 2152 117 10 0 chr4 1897873 1898182 -182390480 + AluSx SINE Alu 1 312 0 672 238 58 0 chr4 1898184 1898356 -182390306 + MER58A DNA MER1_type 2 183 -41 2029 126 3 3 chr4 1898356 1898657 -182390005 + AluSx SINE Alu 1 301 -11 2592 150 38 10 chr4 1900262 1900755 -182387907 - LTR10A LTR ERV1 -21 612 58 2123 94 3 7 chr4 1900755 1901054 -182387608 + AluY SINE Alu 1 298 -13 2592 150 38 10 chr4 1901054 1901114 -182387548 - LTR10A LTR ERV1 -575 58 1 273 206 0 0 chr4 1901525 1901622 -182387040 + C-rich Low_complexity Low_complexity 3 99 0 957 178 0 12 chr4 1903677 1903846 -182384816 + AluJb SINE Alu 141 307 -5 1026 179 11 5 chr4 1904259 1904273 -182384389 + AluSg/x SINE Alu 118 130 -179 1902 115 22 0 chr4 1904273 1904543 -182384119 + AluSx SINE Alu 27 302 -10 1026 179 11 5 chr4 1904543 1904712 -182383950 + AluSg/x SINE Alu 130 302 -7 1982 112 22 0 chr4 1904719 1904997 -182383665 + AluSc SINE Alu 14 297 -12 2302 101 0 0 chr4 1904999 1905305 -182383357 + AluSg SINE Alu 3 308 -2 20407 32 18 0 chr4 1957181 1960292 -182328370 - L1PA4 LINE L1 -246 5909 2746 399 284 11 16 chr4 1960293 1960476 -182328186 + L1MEc LINE L1 2040 2221 -4175 5876 181 40 17 chr4 1960624 1961497 -182327165 - L1MC3 LINE L1 -13 7772 6860 243 0 0 0 chr4 1961497 1961524 -182327138 + (TG)n Simple_repeat Simple_repeat 1 27 0 5876 181 40 17 chr4 1961524 1961906 -182326756 - L1MC3 LINE L1 -925 6860 6488 22 0 0 0 chr4 1961965 1961987 -182326675 + AT_rich Low_complexity Low_complexity 1 22 0 1767 143 3 21 chr4 1962022 1962308 -182326354 - AluJb SINE Alu -31 281 1 419 266 32 19 chr4 1962472 1962626 -182326036 + L1M4 LINE L1 5 160 -6382 701 168 8 46 chr4 1962634 1962765 -182325897 + FLAM_C SINE Alu 5 130 -3 2172 83 0 3 chr4 1962792 1963093 -182325569 + AluY SINE Alu 1 300 -11 1003 110 26 0 chr4 1963316 1963470 -182325192 - AluSx SINE Alu -154 158 1 666 142 130 35 chr4 1963470 1963639 -182325023 - L1M4 LINE L1 -1483 4663 4479 1029 141 56 5 chr4 1963642 1963840 -182324822 + AluJo SINE Alu 13 220 -92 288 146 0 36 chr4 1963840 1963895 -182324767 + FLAM_A SINE Alu 85 131 -2 872 255 60 3 chr4 1963896 1964198 -182324464 - L1M4 LINE L1 -1661 4485 4167 2129 94 3 0 chr4 1964227 1964513 -182324149 + AluSq SINE Alu 1 287 -26 1539 82 0 0 chr4 1964513 1964709 -182323953 + AluSq SINE Alu 79 274 -39 236 250 98 0 chr4 1964739 1964831 -182323831 - L1M4 LINE L1 -1497 4649 4549 1089 144 17 0 chr4 1964913 1965086 -182323576 - AluSg/x SINE Alu -16 296 121 731 120 0 17 chr4 1965087 1965204 -182323458 - AluSg/x SINE Alu -22 288 174 1429 115 23 0 chr4 1965206 1965424 -182323238 - AluSx SINE Alu -89 223 1 624 171 31 8 chr4 1965435 1965564 -182323098 - FLAM_C SINE Alu -1 132 1 919 180 208 12 chr4 1965566 1965821 -182322841 - AluJo SINE Alu -7 305 1 455 366 119 12 chr4 1965840 1966176 -182322486 - L1M4 LINE L1 -1712 4434 4063 549 109 9 118 chr4 1966186 1966296 -182322366 - FLAM_C SINE Alu -16 127 30 325 322 68 25 chr4 1966338 1966574 -182322088 - L1M4 LINE L1 -2125 4021 3776 1318 193 83 20 chr4 1966574 1966922 -182321740 - MER96B DNA MER1_type? 0 417 48 252 242 83 38 chr4 1966902 1967034 -182321628 + MER96B DNA MER1_type? 280 417 0 * 2092 77 10 13 chr4 1967152 1967450 -182321212 - AluY SINE Alu -14 297 1 381 275 46 114 chr4 1967644 1967844 -182320818 - L1ME LINE L1 -5708 362 185 1946 119 11 0 chr4 1967844 1968130 -182320532 + AluSx SINE Alu 9 297 -15 381 275 46 114 chr4 1968130 1968209 -182320453 - L1ME LINE L1 -5885 185 102 650 245 47 62 chr4 1968266 1968289 -182320373 - L1M4 LINE L1 -2103 4043 4021 1653 77 52 3 chr4 1968289 1968575 -182320087 - AluY SINE Alu -11 300 1 650 245 47 62 chr4 1968575 1968890 -182319772 - L1M4 LINE L1 -2125 4021 3710 2001 96 23 3 chr4 1969070 1969373 -182319289 + AluSc SINE Alu 1 309 0 305 251 187 49 chr4 1969515 1969764 -182318898 + MER110 LTR ERV1 97 343 -134 1410 143 24 0 chr4 1969775 1970026 -182318636 + AluJo SINE Alu 39 295 -17 2542 42 0 3 chr4 1970689 1971001 -182317661 + AluY SINE Alu 1 311 0 610 229 8 0 chr4 1971137 1971268 -182317394 - FLAM_A SINE Alu -1 132 1 693 189 26 4 chr4 1971451 1971684 -182316978 + CT-rich Low_complexity Low_complexity 1 238 0 2127 94 17 0 chr4 1971701 1972000 -182316662 - AluY SINE Alu -7 304 1 929 111 6 18 chr4 1972000 1972171 -182316491 + (TTTC)n Simple_repeat Simple_repeat 2 170 0 1849 114 14 0 chr4 1972173 1972453 -182316209 - AluSx SINE Alu -18 294 11 237 194 16 0 chr4 1972470 1972532 -182316130 - L1MB7 LINE L1 0 6184 6122 * 1673 184 19 67 chr4 1972525 1972601 -182316061 + L1 LINE L1 4124 4202 -1944 3575 180 32 58 chr4 1972601 1973581 -182315081 + LTR5 LTR ERVK 2 955 -14 1673 184 19 67 chr4 1973581 1973719 -182314943 + L1 LINE L1 4202 4345 -1801 1881 99 95 0 chr4 1973719 1973992 -182314670 - AluSc SINE Alu -10 299 1 1673 184 19 67 chr4 1973992 1974237 -182314425 + L1 LINE L1 4345 4562 -1584 319 226 0 0 chr4 1974238 1974300 -182314362 + AluS SINE Alu 1 62 -240 1856 197 19 12 chr4 1974300 1974716 -182313946 + L1P LINE L1 4858 5276 -870 10173 130 15 26 chr4 1974716 1976347 -182312315 - PRIMA41-int LTR ERV1 -179 6497 4886 1564 162 12 0 chr4 1976347 1976594 -182312068 + MER52A LTR ERV1 1506 1755 0 6560 130 47 17 chr4 1976604 1977722 -182310940 - THE1-int LTR MaLR 0 1580 430 13640 122 24 6 chr4 1977720 1980340 -182308322 - L1PA10 LINE L1 0 6483 3803 2171 108 3 0 chr4 1980340 1980637 -182308025 - AluSq SINE Alu -15 298 1 13640 122 24 6 chr4 1980637 1981039 -182307623 - L1PA10 LINE L1 -2680 3803 3410 1129 112 0 0 chr4 1981041 1981220 -182307442 + L1P LINE L1 4411 4589 -1557 * 9551 185 21 44 chr4 1981217 1981847 -182306815 - L1PA10 LINE L1 -3051 3410 2768 2213 89 0 4 chr4 1981847 1982171 -182306491 + AluSc SINE Alu 2 324 0 9551 185 21 44 chr4 1982171 1982814 -182305848 - L1PA10 LINE L1 -3693 2768 2112 2155 106 0 20 chr4 1982814 1983117 -182305545 - AluSg SINE Alu -13 297 1 9551 185 21 44 chr4 1983117 1983145 -182305517 - L1PA10 LINE L1 -4349 2112 2085 1512 103 198 12 chr4 1983145 1983397 -182305265 + AluSc SINE Alu 1 299 0 9551 185 21 44 chr4 1983397 1984298 -182304364 - L1PA10 LINE L1 -4376 2085 1287 2140 78 26 19 chr4 1984298 1984606 -182304056 - AluSg SINE Alu 0 310 1 9551 185 21 44 chr4 1984606 1985192 -182303470 - L1PA10 LINE L1 -5174 1287 690 1406 151 0 18 chr4 1985221 1985439 -182303223 - AluSg SINE Alu -96 214 1 1041 338 52 66 chr4 1985611 1986487 -182302175 - PRIMA41-int LTR ERV1 -3193 4563 4101 2162 63 30 0 chr4 1986487 1986787 -182301875 - AluY SINE Alu -2 309 1 1041 338 52 66 chr4 1986787 1987472 -182301190 - PRIMA41-int LTR ERV1 -3655 4101 3408 429 364 31 0 chr4 1987639 1987958 -182300704 + ERVL LTR ERVL 3656 3984 -1780 1379 137 172 15 chr4 1988051 1988388 -182300274 + MSTA LTR MaLR 1 390 -38 710 132 26 0 chr4 1988389 1988503 -182300159 - AluSq/x SINE Alu -196 117 1 286 224 64 32 chr4 1988503 1988628 -182300034 + L1M4 LINE L1 2869 2997 -3149 630 179 94 0 chr4 1988678 1988890 -182299772 + LTR23-int LTR ERV1 2275 2506 -2365 1082 294 86 60 chr4 1989007 1989328 -182299334 - L1M4 LINE L1 -3091 3055 2744 396 0 0 0 chr4 1989328 1989372 -182299290 + (TA)n Simple_repeat Simple_repeat 1 44 0 1516 170 71 32 chr4 1989381 1989663 -182298999 - AluJo SINE Alu -19 293 1 1082 294 86 60 chr4 1989663 1989916 -182298746 - L1M4 LINE L1 -3409 2737 2456 574 212 66 99 chr4 1990190 1990216 -182298446 + LTR23-int LTR ERV1 1522 1547 -6573 2049 122 13 0 chr4 1990216 1990520 -182298142 + AluSx SINE Alu 1 308 -4 574 212 66 99 chr4 1990520 1990629 -182298033 + LTR23-int LTR ERV1 1547 1658 -6462 1775 131 17 14 chr4 1990629 1990919 -182297743 + AluSx SINE Alu 1 291 -21 574 212 66 99 chr4 1990919 1991174 -182297488 + LTR23-int LTR ERV1 1658 1900 -6220 2093 80 0 0 chr4 1991189 1991452 -182297210 - AluSx SINE Alu -24 288 26 30 0 0 0 chr4 1993347 1993377 -182295285 + GC_rich Low_complexity Low_complexity 1 30 0 216 97 0 0 chr4 1993460 1993491 -182295171 + (CTG)n Simple_repeat Simple_repeat 1 31 0 24 32 0 0 chr4 1993505 1993536 -182295126 + GC_rich Low_complexity Low_complexity 1 31 0 639 178 39 0 chr4 1997345 1997474 -182291188 - AluJb SINE Alu -21 291 158 264 253 46 11 chr4 1997987 1998074 -182290588 + (CCCCG)n Simple_repeat Simple_repeat 1 90 0 208 179 0 0 chr4 1998505 1998544 -182290118 + MIR SINE MIR 105 143 -119 335 211 22 11 chr4 1999475 1999565 -182289097 + LTR23 LTR ERV1 340 430 -7 1647 158 22 0 chr4 1999952 2000278 -182288384 + AluSx SINE Alu 1 332 0 1596 156 50 23 chr4 2000711 2001012 -182287650 - AluJb SINE Alu 0 312 4 545 121 20 30 chr4 2001248 2001347 -182287315 + LTR23-int LTR ERV1 1557 1654 -4677 1135 155 15 30 chr4 2001353 2001553 -182287109 + AluJo SINE Alu 91 287 -25 423 0 0 0 chr4 2001566 2001613 -182287049 + (CA)n Simple_repeat Simple_repeat 2 48 0 512 186 18 26 chr4 2001634 2001747 -182286915 - FLAM_C SINE Alu 0 143 32 3696 204 34 38 chr4 2001751 2002668 -182285994 + LTR23-int LTR ERV1 1675 2587 -3744 303 220 193 47 chr4 2002708 2002858 -182285804 + MER34C LTR ERV1 160 331 -254 2389 55 3 0 chr4 2002858 2003151 -182285511 + AluSp SINE Alu 1 294 -19 1309 143 40 48 chr4 2003184 2003435 -182285227 - AluJo SINE Alu -4 308 60 1577 204 59 117 chr4 2003441 2004126 -182284536 + LTR23-int LTR ERV1 1144 1784 -3339 2333 87 10 0 chr4 2004126 2004436 -182284226 + AluSp SINE Alu 1 313 0 1577 204 59 117 chr4 2004436 2004494 -182284168 + LTR23-int LTR ERV1 1784 1844 -3279 2440 70 0 0 chr4 2004503 2004804 -182283858 - AluY SINE Alu -9 302 2 818 221 0 0 chr4 2004808 2004948 -182283714 - FRAM SINE Alu -16 160 21 1949 133 141 21 chr4 2005027 2005409 -182283253 - MSTA LTR MaLR 0 428 1 2463 69 0 0 chr4 2005424 2005730 -182282932 - AluSc SINE Alu -3 306 1 548 210 87 72 chr4 2005821 2005907 -182282755 + LTR23-int LTR ERV1 1925 2008 -3657 2280 76 17 3 chr4 2005907 2006209 -182282453 + AluY SINE Alu 1 306 -5 548 210 87 72 chr4 2006209 2006284 -182282378 + LTR23-int LTR ERV1 2008 2080 -3585 1628 181 0 4 chr4 2006284 2006561 -182282101 + AluJb SINE Alu 13 288 -24 548 210 87 72 chr4 2006561 2006762 -182281900 + LTR23-int LTR ERV1 2080 3708 -1957 2301 84 7 0 chr4 2006831 2007130 -182281532 + AluSp SINE Alu 1 301 -12 893 130 0 36 chr4 2007139 2007277 -182281385 + FLAM_C SINE Alu 1 133 0 2232 101 7 0 chr4 2007943 2008249 -182280413 - AluSx SINE Alu -4 308 1 1653 159 103 58 chr4 2008569 2008985 -182279677 + LTR23 LTR ERV1 1 435 -2 32 0 0 0 chr4 2009491 2009523 -182279139 + GC_rich Low_complexity Low_complexity 1 32 0 21 57 0 0 chr4 2009650 2009685 -182278977 + GC_rich Low_complexity Low_complexity 1 35 0 304 286 0 39 chr4 2010013 2010090 -182278572 - L1MDa LINE L1 -4037 2503 2430 21 0 0 0 chr4 2010954 2010975 -182277687 + AT_rich Low_complexity Low_complexity 1 21 0 496 265 9 55 chr4 2014486 2014705 -182273957 - AluYa5 SINE Alu -5 306 98 191 36 36 0 chr4 2017807 2017835 -182270827 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 2312 101 3 0 chr4 2019335 2019643 -182269019 + AluSc SINE Alu 1 309 0 900 221 82 41 chr4 2019660 2020008 -182268654 - MLT1C LTR MaLR -56 411 42 2871 198 96 14 chr4 2020379 2021100 -182267562 + L1MB7 LINE L1 5348 6127 -57 1020 178 23 0 chr4 2021100 2021274 -182267388 - AluJb SINE Alu -30 282 105 739 104 0 0 chr4 2021274 2021380 -182267282 - FLAM_C SINE Alu -1 142 37 254 153 85 17 chr4 2021407 2021466 -182267196 + L1MB7 LINE L1 6112 6174 -10 322 324 41 14 chr4 2025553 2025698 -182262964 + MIR SINE MIR 37 185 -77 1668 190 122 117 chr4 2025701 2026274 -182262388 - MER70B LTR ERVL -2 576 1 444 67 0 0 chr4 2029061 2029121 -182259541 + (TG)n Simple_repeat Simple_repeat 1 60 0 1573 185 10 89 chr4 2029791 2030085 -182258577 - MLT1B LTR MaLR -16 374 119 1892 148 0 43 chr4 2030085 2030230 -182258432 + AluJo SINE Alu 1 128 -184 2447 80 0 22 chr4 2030230 2030542 -182258120 + AluY SINE Alu 1 305 -6 1892 148 0 43 chr4 2030542 2030701 -182257961 + AluJo SINE Alu 128 292 -20 1573 185 10 89 chr4 2030701 2030812 -182257850 - MLT1B LTR MaLR -271 119 1 384 376 6 0 chr4 2031201 2031363 -182257299 + (CA)n Simple_repeat Simple_repeat 1 163 0 2004 124 0 59 chr4 2032315 2032622 -182256040 + AluSx SINE Alu 2 290 -22 1862 163 3 3 chr4 2033605 2033893 -182254769 + AluJo SINE Alu 1 288 -24 2362 109 0 0 chr4 2033903 2034206 -182254456 + AluSg SINE Alu 1 303 -7 585 0 0 0 chr4 2034212 2034277 -182254385 + (TA)n Simple_repeat Simple_repeat 2 66 0 2425 105 0 0 chr4 2034717 2035022 -182253640 + AluSq SINE Alu 1 305 -8 256 219 0 41 chr4 2037028 2037101 -182251561 + CT-rich Low_complexity Low_complexity 1 70 0 1021 209 67 4 chr4 2037295 2037520 -182251142 - MER8 DNA MER2_type 0 239 1 971 203 30 0 chr4 2037570 2037767 -182250895 + MER21B LTR ERV1 467 669 -194 2192 105 0 0 chr4 2037767 2038044 -182250618 - AluSx SINE Alu -35 277 1 330 241 0 0 chr4 2038044 2038131 -182250531 - L1MEc LINE L1 -1775 4440 4354 3314 197 45 38 chr4 2038149 2038986 -182249676 - MER21B LTR ERV1 -20 843 1 2690 46 0 0 chr4 2038987 2039293 -182249369 - AluY SINE Alu -5 306 1 1016 217 165 37 chr4 2039305 2039409 -182249253 - L1MEc LINE L1 -1856 4359 4270 345 24 0 0 chr4 2039409 2039451 -182249211 + (TG)n Simple_repeat Simple_repeat 2 43 0 1016 217 165 37 chr4 2039451 2039747 -182248915 - L1MEc LINE L1 -1945 4270 3908 232 250 140 20 chr4 2039805 2039905 -182248757 + L2 LINE L2 3193 3304 -9 2123 36 4 4 chr4 2039949 2040223 -182248439 - L1PA3 LINE L1 -2 6153 5880 246 299 56 56 chr4 2040349 2040456 -182248206 - MIR3 SINE MIR -7 201 95 286 254 17 1 chr4 2040744 2040820 -182247842 - MER5B DNA MER1_type -26 163 75 6318 228 66 40 chr4 2040833 2043107 -182245555 - L1MEc LINE L1 -2291 3924 1712 2441 71 0 43 chr4 2043107 2043431 -182245231 - AluY SINE Alu -1 310 1 6318 228 66 40 chr4 2043431 2044260 -182244402 - L1MEc LINE L1 -4503 1712 906 2258 80 42 3 chr4 2044260 2044548 -182244114 - AluY SINE Alu -12 299 1 2368 99 3 13 chr4 2044549 2044863 -182243799 - AluSp SINE Alu -2 311 1 6318 228 66 40 chr4 2044863 2045539 -182243123 - L1MEc LINE L1 -5308 907 34 375 215 84 9 chr4 2045539 2045646 -182243016 - L2 LINE L2 -12 3301 3187 22 35 0 0 chr4 2045974 2046003 -182242659 + AT_rich Low_complexity Low_complexity 1 29 0 411 241 15 53 chr4 2046168 2046301 -182242361 + L1ME LINE L1 5537 5664 -457 928 186 0 0 chr4 2046921 2047082 -182241580 + FRAM SINE Alu 2 162 -14 2090 108 0 0 chr4 2047472 2047740 -182240922 - AluSx SINE Alu -44 268 1 194 195 24 0 chr4 2048418 2048459 -182240203 - MIR SINE MIR -113 149 108 342 139 0 0 chr4 2049516 2049588 -182239074 + (TCCCC)n Simple_repeat Simple_repeat 2 73 0 1855 119 51 10 chr4 2050369 2050663 -182237999 + AluY SINE Alu 4 309 -2 216 0 0 0 chr4 2050858 2050882 -182237780 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1995 128 0 17 chr4 2050884 2051172 -182237490 - AluSx SINE Alu -29 283 1 1543 161 51 11 chr4 2051602 2051875 -182236787 - AluJo SINE Alu -24 288 5 182 224 48 0 chr4 2052416 2052563 -182236099 + (CTCA)n Simple_repeat Simple_repeat 3 156 0 217 203 51 13 chr4 2052579 2052737 -182235925 + (CACCT)n Simple_repeat Simple_repeat 3 166 0 994 224 117 13 chr4 2053951 2054250 -182234412 - LTR53 LTR ERVL 0 519 190 261 55 0 73 chr4 2054610 2054665 -182233997 + (AGGGGG)n Simple_repeat Simple_repeat 2 52 0 342 344 0 16 chr4 2056067 2056250 -182232412 + G-rich Low_complexity Low_complexity 1 180 0 192 314 0 0 chr4 2056785 2056836 -182231826 - L2 LINE L2 -5 3267 3217 185 32 0 65 chr4 2057879 2057910 -182230752 + (TTTTTA)n Simple_repeat Simple_repeat 2 30 0 715 179 0 0 chr4 2057925 2058042 -182230620 - FLAM_C SINE Alu -25 118 2 367 243 0 42 chr4 2058222 2058366 -182230296 + CT-rich Low_complexity Low_complexity 2 139 0 237 253 6 69 chr4 2058763 2058937 -182229725 + CT-rich Low_complexity Low_complexity 3 165 0 901 203 52 48 chr4 2059121 2059372 -182229290 - L1MB8 LINE L1 -13 6165 5914 250 288 16 24 chr4 2059493 2059618 -182229044 + L1ME LINE L1 5673 5796 -325 311 145 87 0 chr4 2059767 2059836 -182228826 - L1MB4 LINE L1 0 6180 6106 821 110 0 0 chr4 2059867 2059994 -182228668 - L1MB4 LINE L1 -271 5912 5786 2327 211 27 9 chr4 2060025 2060584 -182228078 + L1MB5 LINE L1 4390 4958 -1188 615 126 0 0 chr4 2060615 2060710 -182227952 + MLT2D LTR ERVL 1 95 -319 4333 170 60 9 chr4 2060728 2061623 -182227039 - L1MA7 LINE L1 -10 6281 5341 * 6880 146 39 58 chr4 2061622 2062094 -182226568 + L1 LINE L1 3805 4284 -1862 522 0 0 0 chr4 2062094 2062152 -182226510 + (TA)n Simple_repeat Simple_repeat 2 59 0 2238 110 0 0 chr4 2062152 2062434 -182226228 - AluSg SINE Alu -28 282 1 6880 146 39 58 chr4 2062434 2063485 -182225177 + L1 LINE L1 4282 5301 -845 1684 203 30 0 chr4 2063508 2063808 -182224854 + AluJo SINE Alu 1 309 -3 1482 168 111 0 chr4 2065038 2065335 -182223327 + MLT2D LTR ERVL 77 406 -8 3570 189 83 28 chr4 2065336 2065448 -182223214 + L1MB5 LINE L1 5048 5152 -1022 3394 22 0 0 chr4 2065448 2065858 -182222804 + L1PA2 LINE L1 5746 6155 0 3570 189 83 28 chr4 2065858 2066803 -182221859 + L1MB5 LINE L1 5152 6174 0 283 309 0 0 chr4 2069523 2069607 -182219055 + (CCA)n Simple_repeat Simple_repeat 1 84 0 878 163 42 48 chr4 2070472 2070638 -182218024 - AluJo SINE Alu -142 170 6 2022 89 4 0 chr4 2070877 2071125 -182217537 - AluSx SINE Alu -63 249 1 2317 112 3 0 chr4 2071469 2071774 -182216888 + AluSx SINE Alu 1 306 -6 2345 112 3 10 chr4 2072113 2072427 -182216235 + AluSx SINE Alu 1 312 0 2146 116 0 0 chr4 2072431 2072715 -182215947 + AluY SINE Alu 23 306 -5 1964 154 6 40 chr4 2072895 2073219 -182215443 + 7SLRNA srpRNA srpRNA 2 314 -6 925 257 63 86 chr4 2073232 2073828 -182214834 + L1ME3A LINE L1 991 1566 -4830 2043 123 44 0 chr4 2073828 2074121 -182214541 + AluSx SINE Alu 1 306 -6 925 257 63 86 chr4 2074121 2074314 -182214348 + L1ME3A LINE L1 1566 1762 -4634 1877 137 28 11 chr4 2074325 2074609 -182214053 + AluJo SINE Alu 1 289 -23 1277 279 52 67 chr4 2074734 2075530 -182213132 + L1ME3A LINE L1 1945 2751 -3464 1890 109 81 21 chr4 2075530 2075813 -182212849 - AluSx SINE Alu -8 304 5 1277 279 52 67 chr4 2075813 2075843 -182212819 + L1ME3A LINE L1 2751 2780 -3435 1710 204 10 0 chr4 2075843 2076152 -182212510 + AluJo SINE Alu 1 312 0 1277 279 52 67 chr4 2076152 2076335 -182212327 + L1ME3A LINE L1 2780 2964 -3251 2163 139 0 3 chr4 2076335 2076638 -182212024 - AluSx SINE Alu -10 302 1 2663 49 3 0 chr4 2076646 2076954 -182211708 - AluY SINE Alu -2 309 1 1277 279 52 67 chr4 2076954 2077009 -182211653 + L1ME3A LINE L1 2971 2983 -3232 607 180 62 23 chr4 2077009 2077137 -182211525 - FLAM_C SINE Alu 0 133 1 1277 279 52 67 chr4 2077137 2077186 -182211476 + L1ME3A LINE L1 2983 3031 -3184 659 118 0 0 chr4 2077192 2077285 -182211377 + AluJ/FLAM SINE Alu 2 94 -218 438 173 0 37 chr4 2077287 2077368 -182211294 - AluSc SINE Alu -110 199 122 1129 192 0 0 chr4 2077444 2077626 -182211036 + AluJo SINE Alu 121 302 -10 2736 249 32 78 chr4 2077627 2077861 -182210801 + L1ME3A LINE L1 3040 3283 -2932 2191 128 0 7 chr4 2077861 2078157 -182210505 - AluSg SINE Alu -16 294 1 2736 249 32 78 chr4 2078157 2078582 -182210080 + L1ME3A LINE L1 3283 3726 -2489 1832 189 3 0 chr4 2078582 2078879 -182209783 - AluJb SINE Alu -14 298 1 2736 249 32 78 chr4 2078879 2079064 -182209598 + L1ME3A LINE L1 3726 3918 -2297 1847 190 0 0 chr4 2079064 2079364 -182209298 + AluJb SINE Alu 3 302 -10 2736 249 32 78 chr4 2079364 2079986 -182208676 + L1ME3A LINE L1 3918 4441 -1774 1354 185 188 28 chr4 2079989 2080383 -182208279 - MSTB2 LTR MaLR 0 457 1 395 345 55 0 chr4 2080383 2080603 -182208059 + L1ME3A LINE L1 4446 4677 -1538 241 244 0 0 chr4 2080615 2080660 -182208002 + polypyrimidine Low_complexity Low_complexity 1 45 0 913 112 22 11 chr4 2080660 2080838 -182207824 + CT-rich Low_complexity Low_complexity 1 180 0 231 167 0 0 chr4 2080863 2080905 -182207757 + CT-rich Low_complexity Low_complexity 1 42 0 343 206 0 0 chr4 2080905 2080973 -182207689 + L1ME3A LINE L1 4684 4751 -1464 356 252 135 0 chr4 2080987 2081098 -182207564 - L1ME LINE L1 -400 5770 5645 804 219 0 0 chr4 2081119 2081265 -182207397 + FRAM SINE Alu 1 146 -30 198 0 0 0 chr4 2081267 2081289 -182207373 + (GAA)n Simple_repeat Simple_repeat 3 24 0 1256 248 77 46 chr4 2081305 2081612 -182207050 + L1ME3A LINE L1 4810 5106 -1129 1525 159 37 40 chr4 2081612 2081908 -182206754 + AluJo SINE Alu 3 297 -15 1256 248 77 46 chr4 2081908 2082353 -182206309 + L1ME3A LINE L1 5106 5584 -651 308 351 161 0 chr4 2082414 2082625 -182206037 + L1ME3A LINE L1 5689 5933 -306 524 151 35 126 chr4 2082630 2082829 -182205833 + MER53 DNA DNA 3 183 -6 239 281 0 0 chr4 2082988 2083045 -182205617 + L1ME3A LINE L1 6114 6170 -69 399 296 54 96 chr4 2083221 2083501 -182205161 + L2 LINE L2 3005 3272 0 304 215 43 32 chr4 2086306 2086399 -182202263 - L1MB7 LINE L1 -183 6001 5908 1084 291 59 0 chr4 2086532 2086938 -182201724 - L1MB7 LINE L1 -278 5906 5477 209 276 67 75 chr4 2088136 2088270 -182200392 - L2 LINE L2 -2 3270 3138 244 228 0 0 chr4 2089244 2089301 -182199361 - L1ME4a LINE L1 -4 6117 6061 1681 181 7 16 chr4 2089308 2089618 -182199044 + AluJo SINE Alu 3 309 -3 301 275 142 0 chr4 2089650 2089770 -182198892 - L1M4 LINE L1 -2929 3217 3081 330 183 11 21 chr4 2089778 2089871 -182198791 + C-rich Low_complexity Low_complexity 2 93 0 697 243 98 6 chr4 2089871 2090044 -182198618 - AluJo SINE Alu -4 308 120 308 298 21 0 chr4 2090044 2090138 -182198524 - L1ME LINE L1 -465 5656 5561 255 319 148 0 chr4 2093728 2093863 -182194799 - L2 LINE L2 -240 3073 2919 2122 113 3 29 chr4 2094036 2094346 -182194316 + AluSq SINE Alu 2 303 -10 675 174 58 0 chr4 2094389 2094527 -182194135 - L1ME LINE L1 -629 5537 5392 822 126 15 37 chr4 2094530 2094665 -182193997 - FLAM_A SINE Alu -1 141 10 5368 235 53 35 chr4 2094676 2095734 -182192928 - L1ME LINE L1 -751 5395 4285 2502 57 0 0 chr4 2095734 2096034 -182192628 - AluY SINE Alu -11 300 1 5368 235 53 35 chr4 2096034 2096861 -182191801 - L1ME LINE L1 -1861 4285 3475 188 298 0 0 chr4 2098240 2098287 -182190375 + L3b LINE CR1 1300 1346 -237 247 167 0 121 chr4 2099749 2099815 -182188847 + MIR SINE MIR 79 136 -126 346 178 78 9 chr4 2099815 2099914 -182188748 + AluJ/FLAM SINE Alu 1 77 -225 1686 186 13 0 chr4 2100197 2100504 -182188158 - AluSx SINE Alu -1 311 1 1632 174 54 14 chr4 2100516 2100810 -182187852 - AluJo SINE Alu -6 306 1 288 218 0 0 chr4 2100815 2100870 -182187792 - MIR SINE MIR -116 146 92 182 170 0 64 chr4 2101322 2101369 -182187293 + L2 LINE L2 3009 3052 -220 753 252 204 21 chr4 2102273 2102652 -182186010 - MLT1D LTR MaLR -7 488 52 394 231 29 0 chr4 2102915 2103019 -182185643 - MLT1E3 LTR MaLR -76 548 442 2416 197 15 15 chr4 2104121 2104587 -182184075 - MLT1C LTR MaLR -1 466 1 637 200 8 8 chr4 2105129 2105249 -182183413 + AluJb SINE Alu 146 265 -47 1012 163 4 6 chr4 2105897 2106404 -182182258 + (TGGA)n Simple_repeat Simple_repeat 1 506 0 773 148 8 0 chr4 2106567 2106689 -182181973 - FLAM_A SINE Alu 0 142 20 2053 175 47 11 chr4 2107785 2108167 -182180495 + MSTD LTR MaLR 1 396 0 1857 142 6 25 chr4 2108964 2109282 -182179380 - AluJo SINE Alu 0 312 1 302 328 61 23 chr4 2109301 2109432 -182179230 - L1ME LINE L1 -264 5857 5722 3494 203 32 69 chr4 2109479 2109711 -182178951 - L1MB7 LINE L1 -54 6130 5891 2365 57 10 7 chr4 2109711 2110008 -182178654 - AluY SINE Alu -13 298 1 3494 203 32 69 chr4 2110008 2110058 -182178604 - L1MB7 LINE L1 -293 5891 5841 1965 106 7 0 chr4 2110058 2110333 -182178329 - AluSx SINE Alu -12 300 24 3494 203 32 69 chr4 2110333 2111020 -182177642 - L1MB7 LINE L1 -343 5841 5130 1584 133 0 4 chr4 2111020 2111253 -182177409 + AluJb SINE Alu 3 234 -78 3494 203 32 69 chr4 2111253 2111991 -182176671 - L1MB7 LINE L1 -1054 5130 4316 2264 91 3 3 chr4 2111998 2112307 -182176355 - AluSx SINE Alu -2 310 2 363 222 0 0 chr4 2112311 2112392 -182176270 - L1MB7 LINE L1 0 6184 6104 1961 229 50 12 chr4 2112514 2113029 -182175633 - L1MB3 LINE L1 -2 6181 5647 271 266 112 21 chr4 2113046 2113189 -182175473 + HAL1 LINE L1 538 693 -1814 284 222 25 25 chr4 2113760 2113841 -182174821 - L1MB3 LINE L1 -572 5590 5510 335 361 100 11 chr4 2113850 2114030 -182174632 + HAL1 LINE L1 822 1017 -1490 291 206 28 19 chr4 2114043 2114150 -182174512 + HAL1 LINE L1 1069 1176 -1331 637 275 117 43 chr4 2114493 2114908 -182173754 - MLT1D LTR MaLR 0 467 22 189 264 0 0 chr4 2116915 2116987 -182171675 + (CA)n Simple_repeat Simple_repeat 1 72 0 296 276 13 0 chr4 2120861 2120937 -182167725 + MER81 DNA DNA 2 78 -36 205 290 116 0 chr4 2121210 2121279 -182167383 - MIR SINE MIR -79 183 107 196 343 42 21 chr4 2123105 2123248 -182165414 - L3 LINE CR1 -96 1481 1336 * 291 269 47 32 chr4 2123241 2123402 -182165260 - MIR SINE MIR -12 250 89 2162 60 53 3 chr4 2126076 2126361 -182162301 + AluSc SINE Alu 1 299 -10 28 29 0 0 chr4 2126870 2126905 -182161757 + GC_rich Low_complexity Low_complexity 1 35 0 201 238 16 16 chr4 2127242 2127305 -182161357 + (CCCGG)n Simple_repeat Simple_repeat 3 65 0 48 72 0 0 chr4 2127425 2127522 -182161140 + GC_rich Low_complexity Low_complexity 1 97 0 34 42 0 0 chr4 2127610 2127658 -182161004 + GC_rich Low_complexity Low_complexity 1 48 0 204 184 41 0 chr4 2127787 2127836 -182160826 + C-rich Low_complexity Low_complexity 4 54 0 40 87 0 0 chr4 2127861 2127964 -182160698 + GC_rich Low_complexity Low_complexity 1 103 0 24 67 0 0 chr4 2128030 2128075 -182160587 + GC_rich Low_complexity Low_complexity 1 45 0 334 311 67 8 chr4 2129089 2129208 -182159454 - MIR SINE MIR -43 219 94 228 189 167 33 chr4 2131688 2131778 -182156884 - L2 LINE L2 -38 3234 3133 182 40 0 0 chr4 2132619 2132644 -182156018 - L2 LINE L2 -219 3053 3029 344 330 60 47 chr4 2134795 2134968 -182153694 - L1 LINE L1 -802 5344 5172 350 289 102 62 chr4 2134968 2135224 -182153438 - L1ME4a LINE L1 -1 6120 5127 318 244 51 0 chr4 2135228 2135306 -182153356 + L1ME4a LINE L1 5983 6064 -57 209 262 0 0 chr4 2139385 2139427 -182149235 + (TCCG)n Simple_repeat Simple_repeat 2 43 0 228 292 0 0 chr4 2139611 2139676 -182148986 + (CA)n Simple_repeat Simple_repeat 1 65 0 770 74 11 63 chr4 2145420 2145609 -182143053 + (TCTCTG)n Simple_repeat Simple_repeat 2 180 0 257 269 164 10 chr4 2146196 2146300 -182142362 + LTR37B LTR ERV1 197 316 -152 2455 55 0 29 chr4 2146415 2146725 -182141937 - AluSg SINE Alu -9 301 1 287 204 0 84 chr4 2147067 2147209 -182141453 + (CCCCG)n Simple_repeat Simple_repeat 4 133 0 214 218 18 0 chr4 2151021 2151076 -182137586 + T-rich Low_complexity Low_complexity 5 60 0 368 253 91 0 chr4 2151529 2151628 -182137034 + MER91C DNA MER1_type 33 140 0 194 272 102 37 chr4 2151765 2151957 -182136705 - MIR SINE MIR -44 218 16 330 174 11 33 chr4 2151965 2152057 -182136605 + CT-rich Low_complexity Low_complexity 1 90 0 1526 186 47 18 chr4 2152057 2152332 -182136330 - AluJo SINE Alu -17 295 13 267 54 0 0 chr4 2152604 2152641 -182136021 + (TTA)n Simple_repeat Simple_repeat 2 38 0 2047 105 7 18 chr4 2152643 2152928 -182135734 - AluSx SINE Alu -30 282 1 412 219 36 82 chr4 2153849 2154068 -182134594 - L1ME1 LINE L1 -262 5904 5696 564 116 67 37 chr4 2154071 2154191 -182134471 - L1M3 LINE L1 -626 5554 5429 590 252 32 142 chr4 2154211 2154321 -182134341 - L1M4 LINE L1 -3549 2597 2477 2318 95 0 0 chr4 2154321 2154615 -182134047 + AluSg SINE Alu 1 294 -16 590 252 32 142 chr4 2154615 2154904 -182133758 - L1M4 LINE L1 -3669 2477 2238 545 308 88 65 chr4 2155296 2155650 -182133012 - L1ME4a LINE L1 -239 5882 5521 1065 217 99 15 chr4 2155655 2155987 -182132675 - HsTC2 DNA Tc2 -22 1876 1517 417 221 19 10 chr4 2155989 2156093 -182132569 - HsTC2 DNA Tc2 -1793 105 1 398 276 79 26 chr4 2156426 2156578 -182132084 - MER5A DNA MER1_type -1 188 29 286 232 274 0 chr4 2156984 2157079 -182131583 + L2 LINE L2 3193 3313 0 25 0 0 0 chr4 2157269 2157294 -182131368 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr4 2157312 2157334 -182131328 + AT_rich Low_complexity Low_complexity 1 22 0 2188 104 3 3 chr4 2157898 2158186 -182130476 - AluSc SINE Alu -21 288 1 2111 131 0 0 chr4 2159205 2159488 -182129174 - AluSx SINE Alu -25 287 5 2183 92 14 7 chr4 2159647 2159962 -182128700 - AluSq SINE Alu 0 317 1 2244 73 49 0 chr4 2160869 2161156 -182127506 + AluY SINE Alu 1 301 -10 180 143 0 0 chr4 2161218 2161260 -182127402 + (T)n Simple_repeat Simple_repeat 1 42 0 515 135 0 0 chr4 2161792 2161866 -182126796 + FLAM_A SINE Alu 53 126 -16 1282 234 87 9 chr4 2161988 2162322 -182126340 - MLT1E LTR MaLR -8 585 226 566 263 44 12 chr4 2162348 2162508 -182126154 - MLT1E LTR MaLR -428 165 1 423 302 124 28 chr4 2163167 2163501 -182125161 + MLT1J LTR MaLR 38 440 -71 1814 150 46 4 chr4 2163503 2163783 -182124879 - AluJo SINE Alu -17 295 4 21 36 0 0 chr4 2163793 2163821 -182124841 + AT_rich Low_complexity Low_complexity 1 28 0 1999 121 4 0 chr4 2163924 2164196 -182124466 - AluSx SINE Alu -3 309 37 201 133 0 0 chr4 2164218 2164248 -182124414 + (CATA)n Simple_repeat Simple_repeat 3 32 0 22 70 0 0 chr4 2164343 2164386 -182124276 + AT_rich Low_complexity Low_complexity 1 43 0 5770 120 36 106 chr4 2164394 2164540 -182124122 + Tigger3b DNA MER2_type 2 157 -2871 2285 104 3 3 chr4 2164540 2164837 -182123825 - AluSq SINE Alu -16 297 1 5770 120 36 106 chr4 2164837 2165926 -182122736 + Tigger3b DNA MER2_type 157 1145 -1883 2139 156 3 9 chr4 2165926 2166265 -182122397 - MER1B DNA MER1_type 0 337 1 5770 120 36 106 chr4 2166265 2166327 -182122335 + Tigger3b DNA MER2_type 1145 1210 -21 956 253 122 22 chr4 2166518 2166878 -182121784 + HERV16 LTR ERVL 1 396 -4600 845 171 204 52 chr4 2166963 2167232 -182121430 - AluJb SINE Alu -2 310 1 2205 90 67 41 chr4 2167392 2167631 -182121031 - MER4A LTR ERV1 0 664 410 2015 146 7 0 chr4 2167631 2167926 -182120736 + AluSx SINE Alu 1 297 -15 2205 90 67 41 chr4 2167926 2168074 -182120588 - MER4A LTR ERV1 -254 410 267 606 110 0 20 chr4 2168087 2168187 -182120475 - MER4A LTR ERV1 -566 98 1 871 183 35 18 chr4 2168199 2168368 -182120294 + AluJb SINE Alu 129 300 -12 558 234 58 92 chr4 2168752 2169013 -182119649 - LTR41 LTR ERVL -12 761 510 389 241 37 80 chr4 2169279 2169441 -182119221 - LTR41 LTR ERVL -618 155 1 2033 234 66 12 chr4 2169441 2170032 -182118630 + HERV16 LTR ERVL 829 1451 -3545 2152 259 110 21 chr4 2170052 2170798 -182117864 + HERV16 LTR ERVL 1758 2569 -2427 582 268 100 11 chr4 2170858 2171048 -182117614 + HERV16 LTR ERVL 2721 2927 -2069 2259 85 7 43 chr4 2171051 2171356 -182117306 - AluSp SINE Alu -19 294 1 675 191 32 8 chr4 2171359 2171485 -182117177 - FLAM_A SINE Alu -1 141 13 800 323 50 12 chr4 2171657 2172057 -182116605 + HERV16 LTR ERVL 3116 3530 -2234 507 264 59 42 chr4 2172194 2172433 -182116229 + HERV16 LTR ERVL 3421 3663 -1333 959 343 109 20 chr4 2172496 2173435 -182115227 + HERV16 LTR ERVL 4082 5103 -661 491 293 105 4 chr4 2173866 2174095 -182114567 + LTR16A LTR ERVL 102 353 -97 256 315 64 34 chr4 2174224 2174491 -182114171 - L1ME LINE L1 -239 5882 5605 361 233 0 117 chr4 2174553 2174673 -182113989 + L1MC4 LINE L1 6614 6719 -1323 297 314 38 9 chr4 2174774 2174879 -182113783 - L1ME LINE L1 -2191 5617 5510 229 286 8 17 chr4 2174939 2175058 -182113604 - L1P LINE L1 -785 5361 5244 546 304 143 49 chr4 2175125 2175254 -182113408 - L1ME LINE L1 -1340 4806 4691 2267 112 0 0 chr4 2175254 2175549 -182113113 - AluSx SINE Alu -17 295 1 546 304 143 49 chr4 2175549 2175844 -182112818 - L1ME LINE L1 -1455 4691 4342 403 240 0 0 chr4 2175858 2175933 -182112729 + MIR SINE MIR 4 78 -184 301 330 28 132 chr4 2176493 2176811 -182111851 - L2 LINE L2 0 3272 2988 1875 157 0 35 chr4 2176817 2177136 -182111526 + AluJo SINE Alu 1 308 -4 316 211 18 0 chr4 2177332 2177389 -182111273 + MIR SINE MIR 8 65 -197 1248 214 93 68 chr4 2177620 2177661 -182111001 - Charlie2 DNA MER1_type 0 2862 2824 1516 162 0 113 chr4 2177661 2178007 -182110655 - AluSx SINE Alu 0 312 3 1248 214 93 68 chr4 2178007 2178202 -182110460 - Charlie2 DNA MER1_type -38 2824 2635 450 0 0 0 chr4 2178202 2178252 -182110410 + (TTA)n Simple_repeat Simple_repeat 2 51 0 2137 104 7 0 chr4 2178254 2178532 -182110130 - AluSx SINE Alu -30 282 3 378 0 0 0 chr4 2178537 2178579 -182110083 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 2113 111 14 0 chr4 2178582 2178862 -182109800 - AluSg SINE Alu -26 284 1 1862 157 7 14 chr4 2178864 2179206 -182109456 - AluJb SINE Alu 0 312 1 1248 214 93 68 chr4 2179206 2179478 -182109184 - Charlie2 DNA MER1_type -231 2631 2367 212 75 0 25 chr4 2179478 2179518 -182109144 + (TA)n Simple_repeat Simple_repeat 1 39 0 1248 214 93 68 chr4 2179518 2179541 -182109121 - Charlie2 DNA MER1_type -495 2367 2346 2052 161 0 0 chr4 2179541 2179851 -182108811 + AluJb SINE Alu 1 310 -2 1248 214 93 68 chr4 2179851 2179977 -182108685 - Charlie2 DNA MER1_type -516 2346 2169 2340 109 3 0 chr4 2180001 2180303 -182108359 - AluSg SINE Alu -7 303 1 2199 117 7 0 chr4 2180505 2180795 -182107867 - AluSq SINE Alu -21 292 1 1718 159 66 3 chr4 2181671 2182097 -182106565 - L1M4 LINE L1 -587 5597 5149 307 66 0 66 chr4 2182118 2182179 -182106483 + (TTTCC)n Simple_repeat Simple_repeat 1 57 0 14974 188 26 18 chr4 2182179 2183609 -182105053 - L1PB1 LINE L1 -85 6782 5365 2364 96 0 7 chr4 2183609 2183910 -182104752 - AluSg SINE Alu -11 299 1 14974 188 26 18 chr4 2183910 2185368 -182103294 - L1PB1 LINE L1 -1502 5365 3920 2360 93 7 3 chr4 2185368 2185678 -182102984 - AluSq SINE Alu -1 312 2 14974 188 26 18 chr4 2185678 2185911 -182102751 - L1PB1 LINE L1 -2947 3920 3690 2235 115 0 3 chr4 2185911 2186207 -182102455 - AluSc SINE Alu -14 295 1 14974 188 26 18 chr4 2186207 2186753 -182101909 - L1PB1 LINE L1 -3177 3690 3150 2270 114 0 0 chr4 2186753 2187052 -182101610 - AluSx SINE Alu 0 312 14 14974 188 26 18 chr4 2187052 2187362 -182101300 - L1PB1 LINE L1 -3717 3150 2844 194 0 39 0 chr4 2187362 2187388 -182101274 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 14974 188 26 18 chr4 2187388 2188204 -182100458 - L1PB1 LINE L1 -4023 2844 1881 2324 88 0 38 chr4 2188204 2188522 -182100140 - AluSc SINE Alu -3 306 1 14974 188 26 18 chr4 2188522 2189016 -182099646 - L1PB1 LINE L1 -4986 1881 1392 940 202 21 0 chr4 2189013 2189201 -182099461 - L1PB1 LINE L1 -6666 197 6 * 1321 170 54 35 chr4 2189218 2189535 -182099127 - L1M4 LINE L1 -1384 4762 4440 2051 126 10 10 chr4 2189631 2189932 -182098730 + AluSx SINE Alu 1 301 -11 1520 236 39 16 chr4 2190111 2190602 -182098060 - L1M4 LINE L1 -1537 4609 4108 1204 285 66 2 chr4 2191934 2192387 -182096275 + L2 LINE L2 2296 2777 -537 192 288 125 11 chr4 2192476 2192660 -182096002 + L2 LINE L2 2812 3016 -297 229 243 43 14 chr4 2192972 2193042 -182095620 - L1MC4 LINE L1 -385 7657 7586 298 267 62 27 chr4 2193068 2193214 -182095448 - L1MC5 LINE L1 -543 7418 7268 723 123 66 0 chr4 2193243 2193365 -182095297 + MER53 DNA DNA 1 130 -59 407 207 47 64 chr4 2193551 2193717 -182094945 - L1MC4 LINE L1 -740 7221 7084 1632 158 4 36 chr4 2193768 2194046 -182094616 + AluJo SINE Alu 44 312 0 248 254 56 14 chr4 2194143 2194214 -182094448 + L2 LINE L2 3232 3305 -8 225 214 0 0 chr4 2194542 2194598 -182094064 + L1MC4 LINE L1 6648 6703 -1339 905 131 0 91 chr4 2194599 2194775 -182093887 - AluJ SINE Alu -21 291 132 562 317 23 58 chr4 2195258 2195517 -182093145 + MIR SINE MIR 12 261 -1 391 257 0 26 chr4 2195964 2196077 -182092585 + MIR SINE MIR 71 180 -82 27 61 0 15 chr4 2196652 2196692 -182091970 + AT_rich Low_complexity Low_complexity 1 41 -24 851 146 0 0 chr4 2196692 2196822 -182091840 - AluJ SINE Alu -172 130 1 27 61 0 15 chr4 2196822 2196847 -182091815 + AT_rich Low_complexity Low_complexity 41 65 0 2091 116 39 0 chr4 2196870 2197155 -182091507 + AluSg SINE Alu 1 296 -14 420 137 48 186 chr4 2197335 2197373 -182091289 - L1MC5 LINE L1 -104 7857 7815 2030 97 0 8 chr4 2197373 2197641 -182091021 - AluSg SINE Alu -10 300 35 420 137 48 186 chr4 2197641 2197850 -182090812 - L1MC5 LINE L1 -146 7815 7644 5902 131 55 25 chr4 2197872 2199461 -182089201 - L1MA4 LINE L1 -7 6293 4753 2322 94 13 0 chr4 2199461 2199759 -182088903 - AluSc SINE Alu -7 302 1 5902 131 55 25 chr4 2199759 2199846 -182088816 - L1MA4 LINE L1 -1547 4753 4670 2537 72 0 0 chr4 2199846 2200150 -182088512 - AluY SINE Alu -7 304 1 5902 131 55 25 chr4 2200150 2200186 -182088476 - L1MA4 LINE L1 -1630 4670 4530 * 7064 184 58 60 chr4 2200170 2200842 -182087820 - L1 LINE L1 -3849 2479 1807 2447 63 0 7 chr4 2200842 2201189 -182087473 - AluY SINE Alu 0 311 1 7064 184 58 60 chr4 2201189 2201392 -182087270 - L1 LINE L1 -4521 1807 1605 1761 164 0 18 chr4 2201392 2201678 -182086984 - AluJo SINE Alu -30 282 2 7064 184 58 60 chr4 2201678 2201964 -182086698 - L1 LINE L1 -4723 1605 1320 2123 125 0 0 chr4 2201964 2202277 -182086385 + AluSx SINE Alu 1 313 0 7064 184 58 60 chr4 2202277 2203586 -182085076 - L1 LINE L1 -5008 1320 14 2893 207 70 60 chr4 2203600 2203735 -182084927 - L1MC5 LINE L1 -302 7659 7527 2348 104 3 3 chr4 2203735 2204044 -182084618 - AluSx SINE Alu -3 309 1 2893 207 70 60 chr4 2204044 2205012 -182083650 - L1MC5 LINE L1 -434 7527 6530 312 275 37 78 chr4 2205042 2205311 -182083351 - HAL1b LINE L1 -809 539 282 1949 112 101 0 chr4 2205352 2205628 -182083034 + AluSx SINE Alu 1 304 -8 4240 174 76 32 chr4 2205661 2206872 -182081790 - L1MB7 LINE L1 -5 6179 4886 1700 202 64 36 chr4 2206872 2207322 -182081340 - MLT1C LTR MaLR 0 467 5 4240 174 76 32 chr4 2207322 2207464 -182081198 - L1MB7 LINE L1 -1298 4886 4752 2305 75 0 69 chr4 2207491 2207809 -182080853 - AluY SINE Alu -15 296 1 180 0 0 0 chr4 2207986 2208006 -182080656 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 21 0 0 0 chr4 2208028 2208049 -182080613 + AT_rich Low_complexity Low_complexity 1 21 0 2307 115 0 3 chr4 2208060 2208373 -182080289 + AluSx SINE Alu 1 312 0 2151 141 0 0 chr4 2210594 2210891 -182077771 + AluSx SINE Alu 1 297 -15 311 206 62 89 chr4 2211423 2211569 -182077093 - LTR67 LTR ERVL 0 557 416 344 147 0 93 chr4 2211818 2211893 -182076769 - MIR SINE MIR -109 153 86 198 304 104 26 chr4 2212812 2212927 -182075735 + MIR SINE MIR 28 151 -111 304 307 70 42 chr4 2213885 2214126 -182074536 + L1M4 LINE L1 4456 4703 -1443 2137 130 0 3 chr4 2214382 2214681 -182073981 + AluSx SINE Alu 1 298 -14 678 178 17 35 chr4 2215934 2216108 -182072554 + L1MA4A LINE L1 5950 6120 -183 430 224 20 0 chr4 2216109 2216207 -182072455 + L1MA4A LINE L1 6183 6282 -21 412 317 135 13 chr4 2216415 2216907 -182071755 - L1ME3A LINE L1 -206 5964 5402 207 0 0 0 chr4 2217245 2217268 -182071394 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 263 237 172 12 chr4 2217332 2217501 -182071161 - L1ME LINE L1 -715 5449 5254 856 137 14 0 chr4 2217684 2217823 -182070839 - FLAM_C SINE Alu -2 141 1 1630 181 7 24 chr4 2217905 2218198 -182070464 - AluJo SINE Alu -20 292 5 367 277 0 0 chr4 2219758 2219852 -182068810 + MIR SINE MIR 100 193 -69 193 292 171 30 chr4 2220066 2220330 -182068332 + L2 LINE L2 2615 2915 -399 290 204 78 10 chr4 2221210 2221313 -182067349 + L2 LINE L2 3183 3292 -21 253 212 68 104 chr4 2221324 2221484 -182067178 - L1M4 LINE L1 -3173 2973 2822 2013 122 14 0 chr4 2221484 2221770 -182066892 - AluSq SINE Alu -23 290 1 253 212 68 104 chr4 2221770 2221831 -182066831 - L1M4 LINE L1 -3324 2822 2760 2384 189 63 55 chr4 2222389 2222930 -182065732 - MLT2B3 LTR ERVL -9 545 1 289 348 119 28 chr4 2223115 2223270 -182065392 - L2 LINE L2 -431 2883 2743 4972 131 17 71 chr4 2223270 2223291 -182065371 - L1MC1 LINE L1 0 6333 6312 1717 176 14 0 chr4 2223291 2223580 -182065082 + AluJo SINE Alu 1 293 -19 4972 131 17 71 chr4 2223580 2224490 -182064172 - L1MC1 LINE L1 -21 6312 5452 289 348 119 28 chr4 2224490 2224525 -182064137 - L2 LINE L2 -571 2743 2713 2359 113 3 0 chr4 2224525 2224836 -182063826 - AluSx SINE Alu 0 312 1 2227 110 7 0 chr4 2224836 2225136 -182063526 - AluSp SINE Alu -11 302 1 289 348 119 28 chr4 2225136 2225549 -182063113 - L2 LINE L2 -600 2714 2223 234 305 46 8 chr4 2225593 2225724 -182062938 + MER5B DNA MER1_type 41 176 -2 431 281 7 122 chr4 2226231 2226534 -182062128 + L1ME3A LINE L1 4563 4830 -1316 1566 123 18 0 chr4 2226574 2226801 -182061861 + AluJb SINE Alu 1 231 -81 4071 120 106 103 chr4 2226801 2228211 -182060451 - pTR5 LTR ERV1 0 2438 375 285 151 94 0 chr4 2228211 2228264 -182060398 + AluJb SINE Alu 238 295 -7 1163 287 74 42 chr4 2228346 2228598 -182060064 + L1ME3A LINE L1 4957 5200 -962 1734 157 7 11 chr4 2228598 2228878 -182059784 + AluJo SINE Alu 12 290 -22 1163 287 74 42 chr4 2228878 2229498 -182059164 + L1ME3A LINE L1 5200 5864 -298 421 239 158 34 chr4 2229509 2229718 -182058944 + L1ME3A LINE L1 5933 6167 -3 272 220 55 11 chr4 2230778 2230869 -182057793 + L1MC3 LINE L1 7684 7778 -7 246 152 167 30 chr4 2230869 2230935 -182057727 + MER113 DNA MER1_type? 401 475 -46 2133 113 0 14 chr4 2231028 2231320 -182057342 + AluSx SINE Alu 1 288 -24 2234 102 10 3 chr4 2231526 2231831 -182056831 - AluSg SINE Alu -3 307 1 238 161 74 74 chr4 2232005 2232086 -182056576 - MIR SINE MIR -119 143 63 2095 81 25 0 chr4 2233128 2233412 -182055250 + AluY SINE Alu 1 291 -20 25 31 0 0 chr4 2233508 2233540 -182055122 + AT_rich Low_complexity Low_complexity 1 32 0 246 125 333 0 chr4 2234397 2234469 -182054193 - L1MC/D LINE L1 -1989 5819 5724 315 269 221 18 chr4 2234574 2234909 -182053753 - L1MC/D LINE L1 -452 5669 5267 216 0 0 0 chr4 2235010 2235034 -182053628 + (T)n Simple_repeat Simple_repeat 1 24 0 2276 110 3 0 chr4 2235140 2235441 -182053221 + AluSp SINE Alu 1 302 -11 2438 109 0 0 chr4 2235441 2235753 -182052909 + AluSx SINE Alu 1 312 0 325 279 68 37 chr4 2235758 2235784 -182052878 + L2 LINE L2 2688 2712 -602 5075 131 14 74 chr4 2235784 2236700 -182051962 + L1MC1 LINE L1 5452 6312 -21 1888 171 0 0 chr4 2236700 2236993 -182051669 - AluJo SINE Alu -19 293 1 5075 131 14 74 chr4 2236993 2237014 -182051648 + L1MC1 LINE L1 6312 6333 0 325 279 68 37 chr4 2237014 2237177 -182051485 + L2 LINE L2 2712 2883 -431 2642 188 47 55 chr4 2237362 2237911 -182050751 + MLT2B3 LTR ERVL 1 545 -9 425 207 38 110 chr4 2238470 2238533 -182050129 + L1M4 LINE L1 2760 2826 -3320 2187 124 0 0 chr4 2238533 2238824 -182049838 + AluSq SINE Alu 1 291 -22 425 207 38 110 chr4 2238824 2238997 -182049665 + L1M4 LINE L1 2826 2979 -3167 317 217 66 9 chr4 2239003 2239109 -182049553 - L2 LINE L2 -19 3294 3183 219 294 166 30 chr4 2240024 2240289 -182048373 - L2 LINE L2 -399 2915 2615 367 277 0 0 chr4 2240503 2240597 -182048065 - MIR SINE MIR -69 193 100 1630 181 7 24 chr4 2242191 2242484 -182046178 + AluJo SINE Alu 5 292 -20 938 141 0 0 chr4 2242573 2242715 -182045947 + FLAM_C SINE Alu 1 142 -1 321 250 151 12 chr4 2242899 2243071 -182045591 + L1ME LINE L1 5254 5449 -713 207 0 0 0 chr4 2243139 2243162 -182045500 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 450 325 95 11 chr4 2243501 2243885 -182044777 + L1ME LINE L1 5402 5816 -354 430 232 10 0 chr4 2244209 2244308 -182044354 - L1MA4A LINE L1 -21 6282 6183 660 188 11 40 chr4 2244309 2244485 -182044177 - L1MA4A LINE L1 -183 6120 5950 2137 130 0 3 chr4 2245738 2246037 -182042625 - AluSx SINE Alu -14 298 1 304 307 70 42 chr4 2246293 2246534 -182042128 - L1M4 LINE L1 -1443 4703 4456 198 304 104 26 chr4 2247492 2247607 -182041055 - MIR SINE MIR -111 151 28 344 147 0 93 chr4 2248526 2248601 -182040061 + MIR SINE MIR 86 153 -109 311 206 62 89 chr4 2248850 2248996 -182039666 + LTR67 LTR ERVL 416 557 0 2151 141 0 0 chr4 2249528 2249825 -182038837 - AluSx SINE Alu -15 297 1 2307 115 0 3 chr4 2252046 2252359 -182036303 - AluSx SINE Alu 0 312 1 21 0 0 0 chr4 2252370 2252391 -182036271 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr4 2252413 2252433 -182036229 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 2305 75 0 69 chr4 2252610 2252928 -182035734 + AluY SINE Alu 1 296 -15 4240 174 76 32 chr4 2252955 2253097 -182035565 + L1MB7 LINE L1 4752 4886 -1298 1700 202 64 36 chr4 2253097 2253547 -182035115 + MLT1C LTR MaLR 5 467 0 4240 174 76 32 chr4 2253547 2254758 -182033904 + L1MB7 LINE L1 4886 6179 -5 1949 112 101 0 chr4 2254791 2255067 -182033595 - AluSx SINE Alu -8 304 1 350 279 51 35 chr4 2255182 2255379 -182033283 + HAL1b LINE L1 340 539 -809 2893 207 70 60 chr4 2255409 2256377 -182032285 + L1MC5 LINE L1 6530 7527 -434 2348 104 3 3 chr4 2256377 2256686 -182031976 + AluSx SINE Alu 1 309 -3 2893 207 70 60 chr4 2256686 2256821 -182031841 + L1MC5 LINE L1 7527 7659 -302 7064 176 54 49 chr4 2256835 2258144 -182030518 + L1MA4 LINE L1 14 1314 -5014 2122 125 0 0 chr4 2258144 2258457 -182030205 - AluSx SINE Alu 0 313 1 7064 176 54 49 chr4 2258457 2258743 -182029919 + L1MA4 LINE L1 1314 1597 -4731 1761 164 0 18 chr4 2258743 2259029 -182029633 + AluJo SINE Alu 2 282 -30 7064 176 54 49 chr4 2259029 2259232 -182029430 + L1MA4 LINE L1 1597 1797 -4531 2447 63 0 7 chr4 2259232 2259579 -182029083 + AluY SINE Alu 1 311 0 7064 176 54 49 chr4 2259579 2260251 -182028411 + L1MA4 LINE L1 1797 2479 -3849 5902 131 55 25 chr4 2260235 2260271 -182028391 + L1MA4 LINE L1 4712 4745 -1737 * 2549 69 0 0 chr4 2260271 2260575 -182028087 + AluY SINE Alu 1 304 -7 5902 131 55 25 chr4 2260575 2260662 -182028000 + L1MA4 LINE L1 4745 4828 -1654 2322 94 13 0 chr4 2260662 2260960 -182027702 + AluSc SINE Alu 1 302 -7 5902 131 55 25 chr4 2260960 2262549 -182026113 + L1MA4 LINE L1 4828 6475 -7 418 138 49 183 chr4 2262572 2262780 -182025882 + L1MC5 LINE L1 7645 7817 -144 2050 93 0 7 chr4 2262780 2263049 -182025613 + AluSg SINE Alu 35 301 -9 418 138 49 183 chr4 2263049 2263086 -182025576 + L1MC5 LINE L1 7817 7857 -104 2116 102 39 0 chr4 2263266 2263551 -182025111 - AluSg SINE Alu -14 296 1 27 61 0 15 chr4 2263574 2263599 -182025063 + AT_rich Low_complexity Low_complexity 1 25 -40 851 146 0 0 chr4 2263599 2263729 -182024933 + AluJ SINE Alu 1 130 -172 27 61 0 15 chr4 2263729 2263769 -182024893 + AT_rich Low_complexity Low_complexity 25 65 0 391 257 0 26 chr4 2264344 2264457 -182024205 - MIR SINE MIR -82 180 71 562 317 23 58 chr4 2264904 2265163 -182023499 - MIR SINE MIR -1 261 12 905 131 0 91 chr4 2265646 2265822 -182022840 + AluJ SINE Alu 132 291 -21 225 214 0 0 chr4 2265823 2265879 -182022783 - L1MC4 LINE L1 -1339 6703 6648 248 254 56 14 chr4 2266207 2266278 -182022384 - L2 LINE L2 -8 3305 3232 1632 158 4 36 chr4 2266375 2266653 -182022009 - AluJo SINE Alu 0 312 44 407 207 47 64 chr4 2266704 2266870 -182021792 + L1MC4 LINE L1 7084 7247 -740 723 123 66 0 chr4 2267056 2267178 -182021484 - MER53 DNA DNA -59 130 1 298 267 62 27 chr4 2267207 2267353 -182021309 + L1MC5 LINE L1 7268 7418 -543 229 243 43 14 chr4 2267379 2267449 -182021213 + L1MC4 LINE L1 7586 7657 -385 192 288 125 11 chr4 2267761 2267945 -182020717 - L2 LINE L2 -297 3016 2812 257 91 0 0 chr4 2267992 2268025 -182020637 - U2 snRNA snRNA -152 36 4 1204 285 66 2 chr4 2268034 2268487 -182020175 - L2 LINE L2 -537 2777 2296 1520 236 39 16 chr4 2269819 2270310 -182018352 + L1ME1 LINE L1 4108 4609 -1537 322 272 33 99 chr4 2270318 2270489 -182018173 + L1MDa LINE L1 1492 1676 -4750 2051 126 10 10 chr4 2270489 2270790 -182017872 - AluSx SINE Alu -11 301 1 322 272 33 99 chr4 2270790 2270926 -182017736 + L1MDa LINE L1 1676 1819 -4607 330 374 31 28 chr4 2271061 2271417 -182017245 + L2 LINE L2 2223 2579 -735 337 201 6 28 chr4 2271481 2271569 -182017093 + AluJ/monomer SINE Alu 1 45 -255 2331 206 44 125 chr4 2271822 2272057 -182016605 + L1ME1 LINE L1 5372 5624 -542 433 133 13 0 chr4 2272057 2272128 -182016534 + L1MB2 LINE L1 6096 6171 0 2331 206 44 125 chr4 2272128 2272224 -182016438 + L1ME1 LINE L1 5624 5726 -440 1479 174 0 50 chr4 2272224 2272522 -182016140 + AluJo SINE Alu 1 283 -29 315 0 0 0 chr4 2272523 2272558 -182016104 + (CAAAC)n Simple_repeat Simple_repeat 2 36 0 1781 167 3 30 chr4 2272560 2272697 -182015965 + AluSx SINE Alu 1 140 -172 2295 113 6 3 chr4 2272697 2273008 -182015654 + AluSx SINE Alu 1 312 0 1781 167 3 30 chr4 2273008 2273169 -182015493 + AluSx SINE Alu 140 291 -21 2331 206 44 125 chr4 2273169 2273635 -182015027 + L1ME1 LINE L1 5727 6104 -62 1549 147 33 50 chr4 2273635 2273934 -182014728 - AluJo SINE Alu -18 294 1 2331 206 44 125 chr4 2273934 2273985 -182014677 + L1ME1 LINE L1 6104 6158 -8 378 204 58 0 chr4 2274507 2274610 -182014052 - MER91C DNA MER1_type -1 139 31 301 135 0 104 chr4 2275907 2276003 -182012659 + (GGAGA)n Simple_repeat Simple_repeat 2 87 0 2229 114 3 7 chr4 2278128 2278434 -182010228 + AluSx SINE Alu 1 305 -7 28 22 0 22 chr4 2278733 2278755 -182009907 + AT_rich Low_complexity Low_complexity 1 22 -23 1879 163 0 7 chr4 2278755 2279044 -182009618 - AluJo SINE Alu -25 287 1 28 22 0 22 chr4 2279044 2279067 -182009595 + AT_rich Low_complexity Low_complexity 22 45 0 1977 119 32 3 chr4 2279326 2279611 -182009051 + AluSx SINE Alu 1 293 -19 456 104 0 0 chr4 2279616 2279683 -182008979 + (GGGGA)n Simple_repeat Simple_repeat 4 70 0 1830 159 0 28 chr4 2280253 2280543 -182008119 + AluJb SINE Alu 5 286 -26 1887 266 68 27 chr4 2281541 2282294 -182006368 + L1ME LINE L1 874 1644 -4436 633 149 57 71 chr4 2282379 2282520 -182006142 + FLAM_C SINE Alu 2 140 -3 2663 144 7 2 chr4 2282520 2282944 -182005718 + L1MA5 LINE L1 5490 5915 -385 * 5026 168 33 47 chr4 2282940 2283953 -182004709 - L1MC3 LINE L1 -1362 6423 5426 238 297 102 0 chr4 2286381 2286499 -182002163 + L2 LINE L2 3141 3270 -2 457 279 52 14 chr4 2286512 2286654 -182002008 - MIR SINE MIR -64 144 40 2008 119 0 0 chr4 2287216 2287493 -182001169 - AluSg SINE Alu -33 277 1 250 143 71 0 chr4 2287535 2287577 -182001085 + L2 LINE L2 3226 3270 -2 1802 128 33 4 chr4 2287975 2288278 -182000384 + AluSx SINE Alu 1 311 0 311 230 81 0 chr4 2288761 2288835 -181999827 - MER112 DNA MER1_type -58 202 123 1937 114 4 4 chr4 2289422 2289732 -181998930 - AluSg SINE Alu 0 310 1 1888 161 0 3 chr4 2289820 2290118 -181998544 + AluSx SINE Alu 1 297 -15 302 318 15 19 chr4 2290417 2290587 -181998075 + MLT1K LTR MaLR 429 572 -16 1531 164 135 50 chr4 2291789 2292018 -181996644 + L1ME3A LINE L1 15 290 -6250 217 47 47 23 chr4 2292018 2292061 -181996601 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 1531 164 135 50 chr4 2292061 2292208 -181996454 + L1ME3A LINE L1 290 423 -6117 542 210 142 6 chr4 2292228 2292392 -181996270 + MER31B LTR ERV1 273 510 -4 2149 256 90 4 chr4 2292396 2293161 -181995501 + L1ME3A LINE L1 3342 4172 -2368 693 176 29 0 chr4 2293164 2293300 -181995362 + L1MC/D LINE L1 5616 5755 -487 24 53 0 0 chr4 2293374 2293412 -181995250 + AT_rich Low_complexity Low_complexity 1 38 0 2182 118 0 0 chr4 2293487 2293793 -181994869 - AluSg SINE Alu -4 306 1 27 0 0 0 chr4 2293914 2293941 -181994721 + AT_rich Low_complexity Low_complexity 1 27 0 204 341 12 0 chr4 2294088 2294170 -181994492 - L2 LINE L2 0 3272 3190 1004 273 98 55 chr4 2294290 2295400 -181993262 + L1ME3A LINE L1 5176 6341 -223 33 25 0 0 chr4 2295424 2295464 -181993198 + AT_rich Low_complexity Low_complexity 1 40 0 2104 95 14 3 chr4 2295575 2295871 -181992791 + AluSq SINE Alu 1 299 -14 2312 98 0 0 chr4 2296983 2297288 -181991374 - AluSp SINE Alu -8 305 1 430 336 38 0 chr4 2297294 2297425 -181991237 - L2 LINE L2 -5 3267 3132 973 232 92 129 chr4 2297530 2297732 -181990930 + L1ME1 LINE L1 1112 1320 -5076 2141 88 3 20 chr4 2297732 2298027 -181990635 + AluSg SINE Alu 1 290 -20 973 232 92 129 chr4 2298027 2298378 -181990284 + L1ME1 LINE L1 1320 1632 -4764 1734 142 0 21 chr4 2298378 2298691 -181989971 + AluJb SINE Alu 24 312 0 973 232 92 129 chr4 2298691 2298890 -181989772 + L1ME1 LINE L1 1632 1837 -4559 287 119 24 0 chr4 2298895 2298937 -181989725 - FLAM_A SINE Alu -32 101 59 1017 194 5 23 chr4 2298942 2299141 -181989521 + AluJo SINE Alu 99 295 -17 2280 90 0 3 chr4 2299141 2299452 -181989210 + AluSg SINE Alu 1 310 0 1017 194 5 23 chr4 2299452 2299469 -181989193 + AluJo SINE Alu 295 311 -1 333 162 133 48 chr4 2299479 2299584 -181989078 + L1ME1 LINE L1 2304 2417 -3798 291 276 0 0 chr4 2299651 2299738 -181988924 + L1ME1 LINE L1 2403 2489 -3726 * 2793 249 34 33 chr4 2299725 2301208 -181987454 + L1ME1 LINE L1 4617 6100 -135 1746 177 3 19 chr4 2301360 2301677 -181986985 - AluSx SINE Alu 0 312 1 1088 132 93 39 chr4 2301680 2301884 -181986778 - AluJo SINE Alu -11 301 87 284 302 52 85 chr4 2302181 2302429 -181986233 + L1MC/D LINE L1 5507 5746 -2062 301 291 27 14 chr4 2302773 2302921 -181985741 + HAL1b LINE L1 1191 1340 -8 2129 92 3 7 chr4 2302927 2303222 -181985440 - AluY SINE Alu -17 294 1 2429 58 7 3 chr4 2303254 2303562 -181985100 + AluY SINE Alu 1 309 -2 522 247 218 21 chr4 2303665 2304045 -181984617 + L1ME LINE L1 5267 5721 -400 289 173 214 0 chr4 2304081 2304191 -181984471 + L1ME4a LINE L1 5687 5819 -401 25 31 0 0 chr4 2305051 2305083 -181983579 + AT_rich Low_complexity Low_complexity 1 32 0 386 262 169 55 chr4 2305085 2305183 -181983479 + L1ME4a LINE L1 5827 5912 -209 2095 84 14 0 chr4 2305183 2305470 -181983192 - AluY SINE Alu -20 291 1 386 262 169 55 chr4 2305470 2305608 -181983054 + L1ME4a LINE L1 5912 6090 -31 289 219 115 31 chr4 2306522 2306618 -181982044 + MIR SINE MIR 63 166 -96 2098 102 10 3 chr4 2306779 2307083 -181981579 + AluSg SINE Alu 1 306 -4 2023 116 0 10 chr4 2307291 2307585 -181981077 - AluSx SINE Alu -21 291 1 234 147 162 59 chr4 2307679 2307747 -181980915 - MER113 DNA MER1_type? -46 475 401 266 220 55 11 chr4 2307747 2307838 -181980824 - L1MC3 LINE L1 -7 7778 7684 1334 289 94 15 chr4 2308922 2309735 -181978927 - L1ME3A LINE L1 -17 6153 5179 1695 162 3 19 chr4 2309735 2310043 -181978619 - AluJo SINE Alu -9 303 1 1334 289 94 15 chr4 2310043 2310286 -181978376 - L1ME3A LINE L1 -991 5179 4957 331 167 75 25 chr4 2310368 2310494 -181978168 - AluJb SINE Alu -7 295 238 4268 114 118 134 chr4 2310494 2311847 -181976815 + pTR5 LTR ERV1 815 2438 0 1616 131 0 0 chr4 2311855 2312091 -181976571 - AluJb SINE Alu -76 236 1 480 285 0 121 chr4 2312133 2312438 -181976224 - L1ME3A LINE L1 -1316 4830 4563 2145 114 0 7 chr4 2313396 2313703 -181974959 + AluSx SINE Alu 1 305 -7 28 22 0 22 chr4 2314003 2314025 -181974637 + AT_rich Low_complexity Low_complexity 1 22 -23 1762 163 0 7 chr4 2314025 2314314 -181974348 - AluJo SINE Alu -25 287 1 28 22 0 22 chr4 2314314 2314337 -181974325 + AT_rich Low_complexity Low_complexity 22 45 0 1856 119 32 3 chr4 2314596 2314881 -181973781 + AluSx SINE Alu 1 293 -19 456 104 0 0 chr4 2314886 2314953 -181973709 + (GGGGA)n Simple_repeat Simple_repeat 4 70 0 1715 159 0 28 chr4 2315523 2315813 -181972849 + AluJb SINE Alu 5 286 -26 195 319 28 69 chr4 2316643 2316787 -181971875 - MIR SINE MIR -32 230 93 1878 267 67 29 chr4 2316794 2317564 -181971098 + L1ME LINE L1 859 1644 -4436 634 149 57 71 chr4 2317649 2317790 -181970872 + FLAM_C SINE Alu 2 140 -3 2656 144 7 2 chr4 2317790 2318214 -181970448 + L1MA5 LINE L1 5490 5915 -385 * 4990 168 33 47 chr4 2318210 2319223 -181969439 - L1MC3 LINE L1 -1362 6423 5426 871 175 38 6 chr4 2319457 2319617 -181969045 - AluJo SINE Alu -14 298 134 1768 253 45 25 chr4 2322339 2322856 -181965806 - L1ME LINE L1 -5533 537 11 324 0 0 0 chr4 2323384 2323420 -181965242 + (TG)n Simple_repeat Simple_repeat 1 36 0 180 173 39 77 chr4 2323524 2323576 -181965086 + L2 LINE L2 3234 3283 -30 255 276 57 9 chr4 2325064 2325169 -181963493 - MIR SINE MIR -120 142 33 902 197 134 33 chr4 2325610 2325689 -181962973 + MLT1E LTR MaLR 243 313 -280 2043 104 12 61 chr4 2325689 2326017 -181962645 + AluSx SINE Alu 1 312 0 902 197 134 33 chr4 2326017 2326219 -181962443 + MLT1E LTR MaLR 313 592 -1 222 294 96 0 chr4 2326220 2326356 -181962306 - L2 LINE L2 -255 3058 2910 230 318 0 0 chr4 2326829 2326892 -181961770 + GA-rich Low_complexity Low_complexity 5 67 0 441 110 0 0 chr4 2328315 2328388 -181960274 + (GA)n Simple_repeat Simple_repeat 1 73 0 1378 256 105 67 chr4 2328399 2328989 -181959673 - L1M4 LINE L1 -5727 815 249 2151 99 3 0 chr4 2328989 2329281 -181959381 - AluSg SINE Alu -17 293 1 1378 256 105 67 chr4 2329281 2329308 -181959354 - L1M4 LINE L1 -6293 249 224 701 168 8 46 chr4 2329308 2329439 -181959223 - AluJo SINE Alu -172 130 5 1378 256 105 67 chr4 2329439 2329601 -181959061 - L1M4 LINE L1 -6318 224 5 1767 143 3 21 chr4 2329765 2330051 -181958611 + AluJb SINE Alu 1 281 -31 22 0 0 0 chr4 2330086 2330108 -181958554 + AT_rich Low_complexity Low_complexity 1 22 0 6495 182 20 18 chr4 2330167 2330552 -181958110 + L1MC3 LINE L1 6488 6871 -914 225 0 0 0 chr4 2330552 2330577 -181958085 + (CA)n Simple_repeat Simple_repeat 1 25 0 6495 182 20 18 chr4 2330577 2331485 -181957177 + L1MC3 LINE L1 6871 7784 -1 1540 126 4 8 chr4 2331492 2331730 -181956932 + AluJb SINE Alu 76 312 0 442 368 96 21 chr4 2331902 2332329 -181956333 + L1M4 LINE L1 4259 4717 -1429 303 260 41 89 chr4 2332679 2332825 -181955837 + L1M4 LINE L1 4917 5055 -1091 7359 206 18 48 chr4 2332901 2335864 -181952798 + L1M2 LINE L1 10 2867 -3982 1484 153 43 0 chr4 2335866 2336148 -181952514 - L1M4 LINE L1 -368 5816 5523 310 323 264 0 chr4 2336644 2336997 -181951665 + L2 LINE L2 2239 2684 -630 353 232 143 0 chr4 2337042 2337154 -181951508 + HAL1 LINE L1 5 132 -2375 474 18 0 0 chr4 2337435 2337490 -181951172 + (ATG)n Simple_repeat Simple_repeat 2 56 0 264 322 0 33 chr4 2337510 2337600 -181951062 + L2 LINE L2 1868 1954 -1360 829 316 58 69 chr4 2338286 2338893 -181949769 - L1M4 LINE L1 -1254 5687 5088 212 320 190 28 chr4 2339097 2339350 -181949312 - L2 LINE L2 -562 2752 2459 180 353 47 0 chr4 2339389 2339474 -181949188 - L2 LINE L2 -967 2347 2259 191 281 90 42 chr4 2339606 2339773 -181948889 + L2 LINE L2 2909 3083 -189 473 307 95 26 chr4 2339855 2340086 -181948576 + MIR SINE MIR 16 262 0 2215 265 80 57 chr4 2341130 2341629 -181947033 - L1MCc LINE L1 -3614 3327 2841 22366 24 0 0 chr4 2341629 2345030 -181943632 + L1PA4 LINE L1 2746 6153 -2 2215 265 80 57 chr4 2345030 2345208 -181943454 - L1MCc LINE L1 -4100 2841 2669 2015 131 3 0 chr4 2345208 2345530 -181943132 + AluSx SINE Alu 1 323 0 1795 174 3 0 chr4 2345531 2345824 -181942838 - AluJb SINE Alu -18 294 1 2215 265 80 57 chr4 2345824 2346667 -181941995 - L1MCc LINE L1 -4272 2669 1578 1903 136 3 10 chr4 2346667 2346834 -181941828 - AluSx SINE Alu -6 306 140 189 0 0 0 chr4 2346834 2346855 -181941807 + (TA)n Simple_repeat Simple_repeat 1 21 0 1903 136 3 10 chr4 2346855 2346995 -181941667 - AluSx SINE Alu -172 140 1 2215 265 80 57 chr4 2346995 2347417 -181941245 - L1MCc LINE L1 -5363 1578 1167 265 234 4 32 chr4 2347658 2347738 -181940924 - MIR SINE MIR -61 147 69 213 182 0 0 chr4 2347864 2347897 -181940765 + C-rich Low_complexity Low_complexity 1 33 0 182 276 52 17 chr4 2349508 2349566 -181939096 - MIR SINE MIR -67 141 82 183 269 104 0 chr4 2349915 2349982 -181938680 - L2 LINE L2 -52 3261 3188 237 98 16 49 chr4 2351380 2351441 -181937221 + (CCCG)n Simple_repeat Simple_repeat 1 59 0 204 182 0 0 chr4 2355344 2355388 -181933274 + (TG)n Simple_repeat Simple_repeat 1 44 0 386 385 0 22 chr4 2355412 2355594 -181933068 + (CGTG)n Simple_repeat Simple_repeat 2 179 0 * 517 344 6 6 chr4 2355490 2355670 -181932992 + (TG)n Simple_repeat Simple_repeat 1 180 0 414 320 11 17 chr4 2355744 2355925 -181932737 + (TG)n Simple_repeat Simple_repeat 1 180 0 269 333 11 0 chr4 2358409 2358499 -181930163 + MIR SINE MIR 105 195 -67 202 320 13 0 chr4 2359636 2359714 -181928948 + (CA)n Simple_repeat Simple_repeat 1 79 0 534 173 39 47 chr4 2365706 2365833 -181922829 - AluSg/x SINE Alu -2 310 185 1739 131 34 37 chr4 2366177 2366474 -181922188 - AluJb SINE Alu -16 296 1 206 278 10 0 chr4 2366680 2366777 -181921885 + (TG)n Simple_repeat Simple_repeat 2 99 0 2187 104 7 0 chr4 2366830 2367128 -181921534 - AluSx SINE Alu -12 300 1 2074 121 3 3 chr4 2369486 2369793 -181918869 - AluSx SINE Alu -5 307 1 328 169 28 0 chr4 2369995 2370066 -181918596 - MER69 DNA AcHobo -3 2523 2451 * 414 248 88 9 chr4 2370065 2370178 -181918484 - MER69 DNA AcHobo -1854 672 551 1129 330 67 16 chr4 2370306 2371070 -181917592 - L1MEc LINE L1 -5557 839 37 853 297 147 5 chr4 2371070 2371491 -181917171 - MER69 DNA AcHobo -1982 544 64 200 321 47 28 chr4 2371940 2372046 -181916616 + L2 LINE L2 3120 3227 -86 865 310 81 52 chr4 2372391 2372871 -181915791 - L1ME LINE L1 -2976 3104 2611 184 274 274 0 chr4 2373465 2373567 -181915095 - L2 LINE L2 0 3272 3143 755 160 0 76 chr4 2373729 2373873 -181914789 + FLAM_C SINE Alu 1 133 0 290 300 75 59 chr4 2373888 2374130 -181914532 + MIR SINE MIR 8 256 -6 995 208 68 12 chr4 2375009 2375346 -181913316 - L1ME LINE L1 -5133 937 582 2720 194 5 52 chr4 2475347 2475976 -181812686 + LTR49-int LTR ERV1 1987 2585 -3746 6189 227 63 43 chr4 2575979 2576433 -181712229 + L1MEc LINE L1 333 776 -5439 2356 99 3 13 chr4 2576433 2576747 -181711915 + AluSp SINE Alu 1 311 -2 2222 83 42 3 chr4 2576748 2577036 -181711626 + AluY SINE Alu 1 299 -12 6189 227 63 43 chr4 2577036 2577865 -181710797 + L1MEc LINE L1 776 1586 -4629 2430 71 0 40 chr4 2577865 2578188 -181710474 + AluY SINE Alu 1 310 -1 6189 227 63 43 chr4 2578188 2580462 -181708200 + L1MEc LINE L1 1586 3924 -2291 300 290 37 11 chr4 2580462 2580551 -181708111 + MER5B DNA MER1_type 61 163 -26 270 299 56 56 chr4 2580839 2580946 -181707716 + MIR3 SINE MIR 95 201 -7 2238 36 4 4 chr4 2581072 2581346 -181707316 + L1PA3 LINE L1 5880 6153 -2 258 250 140 20 chr4 2581390 2581490 -181707172 - L2 LINE L2 -9 3304 3193 996 219 165 37 chr4 2581548 2581844 -181706818 + L1MEc LINE L1 3908 4270 -1945 345 24 0 0 chr4 2581844 2581886 -181706776 + (CA)n Simple_repeat Simple_repeat 2 43 0 996 219 165 37 chr4 2581886 2581990 -181706672 + L1MEc LINE L1 4270 4359 -1856 2673 46 0 0 chr4 2582002 2582308 -181706354 + AluY SINE Alu 1 306 -5 3209 197 45 38 chr4 2582309 2583146 -181705516 + MER21B LTR ERV1 1 843 -20 327 241 0 0 chr4 2583164 2583251 -181705411 + L1MEc LINE L1 4354 4440 -1775 2178 105 0 0 chr4 2583251 2583528 -181705134 + AluSx SINE Alu 1 277 -35 945 203 30 0 chr4 2583528 2583725 -181704937 - MER21B LTR ERV1 -194 669 467 1107 209 67 4 chr4 2583775 2584000 -181704662 + MER8 DNA MER2_type 1 239 0 256 219 0 41 chr4 2584194 2584267 -181704395 + GA-rich Low_complexity Low_complexity 1 70 0 2421 105 0 0 chr4 2586273 2586578 -181702084 - AluSq SINE Alu -8 305 1 585 0 0 0 chr4 2587018 2587083 -181701579 + (TA)n Simple_repeat Simple_repeat 1 65 0 2354 109 0 0 chr4 2587089 2587392 -181701270 - AluSg SINE Alu -7 303 1 1850 163 3 3 chr4 2587402 2587690 -181700972 - AluJo SINE Alu -24 288 1 1992 124 0 59 chr4 2588673 2588980 -181699682 - AluSx SINE Alu -22 290 2 384 376 6 0 chr4 2589932 2590094 -181698568 + (TG)n Simple_repeat Simple_repeat 1 163 0 1493 185 10 89 chr4 2590483 2590594 -181698068 + MLT1B LTR MaLR 1 119 -271 1814 148 0 43 chr4 2590594 2590753 -181697909 - AluJo SINE Alu -20 292 151 2326 80 0 22 chr4 2590753 2591065 -181697597 - AluY SINE Alu -6 305 1 1814 148 0 43 chr4 2591065 2591210 -181697452 - AluJo SINE Alu -161 151 1 1493 185 10 89 chr4 2591210 2591504 -181697158 + MLT1B LTR MaLR 119 374 -16 444 67 0 0 chr4 2592174 2592234 -181696428 + (CA)n Simple_repeat Simple_repeat 1 60 0 1668 190 122 117 chr4 2595021 2595594 -181693068 + MER70B LTR ERVL 1 576 -2 322 324 41 14 chr4 2595597 2595742 -181692920 - MIR SINE MIR -77 185 37 254 153 85 17 chr4 2599829 2599888 -181688774 - L1MB7 LINE L1 -10 6174 6112 739 104 0 0 chr4 2599915 2600021 -181688641 + FLAM_C SINE Alu 37 142 -1 1020 178 23 0 chr4 2600021 2600195 -181688467 + AluJb SINE Alu 105 282 -30 2871 198 96 14 chr4 2600195 2600916 -181687746 - L1MB7 LINE L1 -57 6127 5348 900 221 82 41 chr4 2601287 2601635 -181687027 + MLT1C LTR MaLR 42 411 -56 2312 101 3 0 chr4 2601652 2601960 -181686702 - AluSc SINE Alu 0 309 1 191 36 36 0 chr4 2603460 2603488 -181685174 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 283 309 0 0 chr4 2605200 2605284 -181683378 + (TGG)n Simple_repeat Simple_repeat 1 84 0 3364 191 80 25 chr4 2608005 2608950 -181679712 - L1MB5 LINE L1 0 6174 5152 3569 22 0 0 chr4 2608950 2609360 -181679302 - L1PA2 LINE L1 0 6155 5746 3364 191 80 25 chr4 2609360 2609472 -181679190 - L1MB5 LINE L1 -1022 5152 5048 1397 168 111 0 chr4 2609473 2609770 -181678892 - MLT2D LTR ERVL -8 406 77 1602 206 30 0 chr4 2611000 2611301 -181677361 - AluJo SINE Alu -2 310 1 6439 145 38 58 chr4 2611324 2612377 -181676285 - L1MB7 LINE L1 -845 5301 4229 2137 110 0 0 chr4 2612377 2612659 -181676003 + AluSg SINE Alu 1 282 -28 180 0 0 0 chr4 2612659 2612679 -181675983 + (TA)n Simple_repeat Simple_repeat 2 21 0 6439 145 38 58 chr4 2612679 2613151 -181675511 - L1MB7 LINE L1 -1915 4231 3805 3998 170 62 9 chr4 2613150 2614044 -181674618 + L1MA7 LINE L1 5341 6281 -10 * 580 126 0 0 chr4 2614062 2614157 -181674505 - MLT2D LTR ERVL -319 95 1 2199 211 27 9 chr4 2614187 2614746 -181673916 - L1MB5 LINE L1 -1188 4958 4390 770 110 0 0 chr4 2614777 2614904 -181673758 + L1MB4 LINE L1 5786 5912 -271 287 49 0 0 chr4 2614905 2614946 -181673716 - MADE1 DNA Mariner 0 80 40 280 125 36 0 chr4 2614948 2615004 -181673658 + L1MB4 LINE L1 6123 6180 0 232 288 16 24 chr4 2615153 2615278 -181673384 - L1ME LINE L1 -325 5796 5673 836 203 52 48 chr4 2615399 2615650 -181673012 + L1MB8 LINE L1 5914 6165 -13 237 253 6 69 chr4 2615834 2616008 -181672654 + GA-rich Low_complexity Low_complexity 3 165 0 367 243 0 42 chr4 2616405 2616549 -181672113 + GA-rich Low_complexity Low_complexity 2 139 0 777 167 0 67 chr4 2616728 2616878 -181671784 + FLAM_C SINE Alu 1 140 -3 211 358 15 0 chr4 2617919 2617986 -181670676 + L2 LINE L2 3241 3308 -5 342 344 0 16 chr4 2618521 2618704 -181669958 + C-rich Low_complexity Low_complexity 1 180 0 183 98 0 78 chr4 2620105 2620156 -181668506 + (CCCCCT)n Simple_repeat Simple_repeat 2 48 0 955 224 117 13 chr4 2620516 2620815 -181667847 + LTR53 LTR ERVL 190 519 0 217 203 51 13 chr4 2622028 2622186 -181666476 + (AGGTG)n Simple_repeat Simple_repeat 3 166 0 182 224 48 0 chr4 2622202 2622349 -181666313 + (TGAG)n Simple_repeat Simple_repeat 3 156 0 1478 176 40 0 chr4 2622890 2623163 -181665499 + AluJo SINE Alu 5 288 -24 1911 131 0 17 chr4 2623593 2623907 -181664755 + AluSx SINE Alu 1 309 0 1796 115 51 14 chr4 2624102 2624397 -181664265 - AluY SINE Alu -2 309 4 342 139 0 0 chr4 2625178 2625250 -181663412 + (GGGGA)n Simple_repeat Simple_repeat 2 73 0 205 222 67 0 chr4 2626290 2626352 -181662310 + MIR SINE MIR 89 153 -62 1995 108 0 0 chr4 2627026 2627294 -181661368 + AluSx SINE Alu 1 268 -44 186 359 13 0 chr4 2627581 2627659 -181661003 + MIR SINE MIR 61 139 -69 896 186 0 0 chr4 2627684 2627845 -181660817 - FRAM SINE Alu -14 162 2 392 263 8 45 chr4 2628465 2628598 -181660064 - L1ME LINE L1 -457 5664 5537 22 35 0 0 chr4 2628763 2628792 -181659870 + AT_rich Low_complexity Low_complexity 1 29 0 390 234 75 0 chr4 2629120 2629227 -181659435 + L2 LINE L2 3187 3301 -12 698 264 125 0 chr4 2629227 2629443 -181659219 + L1MEc LINE L1 34 276 -6120 207 162 0 0 chr4 2629494 2629531 -181659131 + GA-rich Low_complexity Low_complexity 4 40 0 1681 181 7 16 chr4 2629634 2629944 -181658718 - AluJo SINE Alu -3 309 3 244 228 0 0 chr4 2629951 2630008 -181658654 + L1ME4a LINE L1 6061 6117 -4 209 276 67 75 chr4 2630982 2631116 -181657546 + L2 LINE L2 3138 3270 -2 1084 291 59 0 chr4 2632314 2632720 -181655942 + L1MB7 LINE L1 5477 5906 -278 397 311 50 93 chr4 2635750 2636030 -181652632 - L2 LINE L2 0 3272 3005 239 281 0 0 chr4 2636206 2636263 -181652399 - L1ME3A LINE L1 -69 6170 6114 524 151 35 126 chr4 2636422 2636621 -181652041 - MER53 DNA DNA -6 183 3 308 351 161 0 chr4 2636626 2636837 -181651825 - L1ME3A LINE L1 -306 5933 5689 1256 243 71 42 chr4 2636898 2637343 -181651319 - L1ME3A LINE L1 -651 5584 5107 1525 159 37 40 chr4 2637343 2637639 -181651023 - AluJo SINE Alu -15 297 3 1256 243 71 42 chr4 2637639 2637946 -181650716 - L1ME3A LINE L1 -1128 5107 4810 198 0 0 0 chr4 2637962 2637984 -181650678 + (TTC)n Simple_repeat Simple_repeat 3 24 0 804 219 0 0 chr4 2637986 2638132 -181650530 - FRAM SINE Alu -30 146 1 356 252 135 0 chr4 2638153 2638264 -181650398 + L1ME LINE L1 5645 5770 -400 343 206 0 0 chr4 2638278 2638346 -181650316 - L1ME3A LINE L1 -1464 4751 4684 231 167 0 0 chr4 2638346 2638388 -181650274 + GA-rich Low_complexity Low_complexity 1 42 0 312 374 83 0 chr4 2638388 2638618 -181650044 + L1M4c LINE L1 947 1195 -5189 395 345 55 0 chr4 2638657 2638877 -181649785 - L1ME3A LINE L1 -1538 4677 4446 1335 185 188 28 chr4 2638877 2639271 -181649391 + MSTB2 LTR MaLR 1 457 0 825 243 45 39 chr4 2639274 2639583 -181649079 - L1ME3A LINE L1 -1774 4441 4131 2022 247 33 54 chr4 2639712 2639896 -181648766 - L1ME3A LINE L1 -2163 4052 3866 1774 190 0 0 chr4 2639896 2640196 -181648466 - AluJb SINE Alu -10 302 3 2022 247 33 54 chr4 2640196 2640381 -181648281 - L1ME3A LINE L1 -2349 3866 3679 1757 189 3 0 chr4 2640381 2640678 -181647984 + AluJb SINE Alu 1 298 -14 2022 247 33 54 chr4 2640678 2641103 -181647559 - L1ME3A LINE L1 -2536 3679 3277 2034 128 0 7 chr4 2641103 2641399 -181647263 + AluSg SINE Alu 1 294 -16 2022 247 33 54 chr4 2641399 2641633 -181647029 - L1ME3A LINE L1 -2938 3277 3040 1033 192 0 0 chr4 2641634 2641816 -181646846 - AluJo SINE Alu -10 302 121 458 173 0 37 chr4 2641892 2641973 -181646689 + AluSc SINE Alu 122 199 -110 688 118 0 0 chr4 2641975 2642068 -181646594 - AluJ/FLAM SINE Alu -218 94 2 1289 269 50 76 chr4 2642074 2642123 -181646539 - L1MEc LINE L1 -3184 3031 2982 637 180 62 23 chr4 2642123 2642251 -181646411 + FLAM_C SINE Alu 1 133 0 1289 269 50 76 chr4 2642251 2642306 -181646356 - L1MEc LINE L1 -3233 2982 2927 2514 45 3 0 chr4 2642306 2642614 -181646048 + AluY SINE Alu 1 309 -2 1992 138 0 3 chr4 2642622 2642920 -181645742 + AluSx SINE Alu 1 297 -15 1289 269 50 76 chr4 2642920 2643108 -181645554 - L1MEc LINE L1 -3295 2920 2729 1566 201 10 0 chr4 2643108 2643417 -181645245 - AluJo SINE Alu 0 312 1 1289 269 50 76 chr4 2643417 2643447 -181645215 - L1MEc LINE L1 -3486 2729 2700 1769 106 81 21 chr4 2643447 2643730 -181644932 + AluSx SINE Alu 5 304 -8 1289 269 50 76 chr4 2643730 2644453 -181644209 - L1MEc LINE L1 -3515 2700 2023 1727 137 28 11 chr4 2644651 2644935 -181643727 - AluJo SINE Alu -23 289 1 964 249 63 86 chr4 2644946 2645139 -181643523 - L1MEc LINE L1 -4634 1762 1566 1886 123 44 0 chr4 2645139 2645432 -181643230 - AluSx SINE Alu -6 306 1 964 249 63 86 chr4 2645432 2646028 -181642634 - L1MEc LINE L1 -4830 1566 991 1801 154 6 40 chr4 2646041 2646365 -181642297 - 7SLRNA srpRNA srpRNA -6 314 2 1999 116 0 0 chr4 2646545 2646829 -181641833 - AluY SINE Alu -5 306 23 2182 112 3 10 chr4 2646832 2647146 -181641516 - AluSx SINE Alu 0 312 1 2156 112 3 0 chr4 2647485 2647790 -181640872 - AluSx SINE Alu -6 306 1 1913 85 4 0 chr4 2648134 2648382 -181640280 + AluSx SINE Alu 1 249 -63 862 157 42 48 chr4 2648621 2648787 -181639875 + AluJo SINE Alu 6 170 -142 1886 89 4 0 chr4 2749378 2749614 -181539048 + AluSg SINE Alu 59 295 -15 740 118 97 28 chr4 2749629 2749773 -181538889 + Tigger7 DNA MER2_type 2311 2464 -27 1382 109 0 0 chr4 2749780 2749955 -181538707 + AluSq SINE Alu 1 175 -138 223 25 50 25 chr4 2749962 2750002 -181538660 + (CAAA)n Simple_repeat Simple_repeat 2 42 0 1537 155 200 70 chr4 2750080 2750325 -181538337 + Tigger3b DNA MER2_type 1 213 -2815 2312 103 0 25 chr4 2750325 2750645 -181538017 - AluSq SINE Alu -1 312 1 1537 155 200 70 chr4 2750645 2750691 -181537971 + Tigger3b DNA MER2_type 213 252 -2776 1477 189 71 27 chr4 2750691 2750988 -181537674 + AluJb SINE Alu 1 310 -2 1537 155 200 70 chr4 2750988 2751179 -181537483 + Tigger3b DNA MER2_type 252 547 -684 2140 136 0 10 chr4 2751208 2751518 -181537144 + AluSg SINE Alu 1 307 -3 320 260 81 16 chr4 2751528 2751651 -181537011 + L1M4 LINE L1 3826 3956 -2190 1324 120 43 14 chr4 2751652 2751861 -181536801 + AluSg/x SINE Alu 96 310 -2 2327 88 3 7 chr4 2751887 2752181 -181536481 + AluSx SINE Alu 13 305 -7 670 178 0 15 chr4 2752314 2752449 -181536213 + FLAM_C SINE Alu 1 133 0 2334 97 0 0 chr4 2752477 2752775 -181535887 + AluSx SINE Alu 1 298 -14 227 368 74 0 chr4 2758574 2758737 -181529925 + MIR SINE MIR 70 244 -18 2269 110 7 0 chr4 2760304 2760603 -181528059 + AluSq SINE Alu 1 301 -12 2235 109 20 0 chr4 2760606 2760910 -181527752 + AluSq SINE Alu 4 313 0 2185 95 3 7 chr4 2760910 2761266 -181527396 + AluSp SINE Alu 1 355 0 1735 178 30 3 chr4 2761675 2761979 -181526683 + AluJb SINE Alu 1 312 0 269 109 22 0 chr4 2762588 2762634 -181526028 + CT-rich Low_complexity Low_complexity 2 48 0 1906 170 0 16 chr4 2762952 2763269 -181525393 + AluJb SINE Alu 1 312 0 2018 161 7 0 chr4 2763340 2763644 -181525018 + AluSx SINE Alu 1 306 -6 1349 122 149 9 chr4 2763872 2764094 -181524568 + AluSg1 SINE Alu 53 305 -4 2564 64 0 0 chr4 2764193 2764490 -181524172 + AluY SINE Alu 1 297 -14 2339 101 3 16 chr4 2764785 2765101 -181523561 + AluSx SINE Alu 1 312 0 1188 99 0 0 chr4 2765101 2765295 -181523367 + AluY SINE Alu 132 325 0 515 206 204 21 chr4 2765305 2765603 -181523059 + L1ME LINE L1 5327 5659 -511 669 161 0 8 chr4 2765749 2765867 -181522795 - FLAM_A SINE Alu -8 134 18 205 307 110 24 chr4 2766255 2766382 -181522280 - MIR3 SINE MIR -41 167 30 1546 163 3 83 chr4 2766651 2766951 -181521711 + AluJo SINE Alu 7 282 -30 1370 104 0 0 chr4 2766951 2767124 -181521538 - AluSg/x SINE Alu -6 304 132 2253 93 41 0 chr4 2767124 2767415 -181521247 - AluSg SINE Alu -7 303 1 265 297 148 33 chr4 2768556 2768738 -181519924 - MIR SINE MIR -7 255 53 2414 88 0 10 chr4 2769640 2769946 -181518716 - AluSg1 SINE Alu -6 303 1 21 0 0 0 chr4 2770214 2770235 -181518427 + AT_rich Low_complexity Low_complexity 1 21 0 2069 110 58 3 chr4 2770245 2770537 -181518125 + AluSp SINE Alu 1 308 -5 427 115 0 0 chr4 2870539 2870600 -181418062 + AluS SINE Alu 233 293 -18 1574 156 10 27 chr4 2872342 2872637 -181416025 + AluJo SINE Alu 1 290 -22 1886 127 37 3 chr4 2872880 2873180 -181415482 + AluSx SINE Alu 1 310 -2 873 184 13 0 chr4 2873616 2873774 -181414888 - FRAM SINE Alu -16 160 1 3151 203 116 93 chr4 2874482 2874900 -181413762 - Charlie7 DNA MER1_type -111 2501 2094 2414 51 0 29 chr4 2874900 2875215 -181413447 + AluY SINE Alu 1 306 -5 3151 203 116 93 chr4 2875215 2875448 -181413214 - Charlie7 DNA MER1_type -518 2094 1868 2076 103 10 3 chr4 2875448 2875740 -181412922 - AluSx SINE Alu -18 294 1 3151 203 116 93 chr4 2875740 2875801 -181412861 - Charlie7 DNA MER1_type -744 1868 1810 2308 75 0 0 chr4 2875801 2876096 -181412566 + AluY SINE Alu 1 295 -16 3151 203 116 93 chr4 2876096 2876592 -181412070 - Charlie7 DNA MER1_type -802 1810 1327 2051 114 7 10 chr4 2876592 2876898 -181411764 + AluSc SINE Alu 1 305 -4 3151 203 116 93 chr4 2876898 2877052 -181411610 - Charlie7 DNA MER1_type -1285 1327 1178 1399 144 59 46 chr4 2877052 2877357 -181411305 + AluJo SINE Alu 1 309 -3 3151 203 116 93 chr4 2877357 2877531 -181411131 - Charlie7 DNA MER1_type -1434 1178 926 1608 148 34 17 chr4 2877770 2878061 -181410601 + AluJb SINE Alu 1 296 -16 1210 238 127 19 chr4 2878171 2878582 -181410080 - Charlie7 DNA MER1_type -1749 863 409 646 169 113 8 chr4 2878606 2878730 -181409932 - FLAM_C SINE Alu -4 139 3 2351 88 0 0 chr4 2878911 2879219 -181409443 + AluSg SINE Alu 1 308 -2 2133 106 3 0 chr4 2879227 2879530 -181409132 + AluSg SINE Alu 2 305 -5 1573 160 11 14 chr4 2879706 2879988 -181408674 - AluJo SINE Alu -31 281 1 281 310 14 0 chr4 2880036 2880107 -181408555 - MIR3 SINE MIR -23 185 114 2247 95 0 0 chr4 2880357 2880661 -181408001 + AluSx SINE Alu 1 304 -8 1843 147 3 7 chr4 2880672 2880972 -181407690 + AluSx SINE Alu 1 299 -13 809 140 0 37 chr4 2881202 2881338 -181407324 + AluJ SINE Alu 1 131 -181 2058 92 58 3 chr4 2881912 2882207 -181406455 + AluSq SINE Alu 1 311 -2 876 222 0 0 chr4 2882560 2882722 -181405940 + AluJ SINE Alu 137 298 -4 287 234 9 56 chr4 2882844 2882951 -181405711 + MIR3 SINE MIR 106 207 -1 1862 143 10 3 chr4 2883135 2883436 -181405226 - AluSx SINE Alu -9 303 1 1086 216 7 33 chr4 2883465 2883738 -181404924 + AluJo SINE Alu 1 266 -46 1937 136 13 7 chr4 2883853 2884163 -181404499 - AluSx SINE Alu 0 312 1 2189 92 0 7 chr4 2884189 2884483 -181404179 - AluSc SINE Alu -17 292 1 846 181 99 45 chr4 2884600 2884821 -181403841 + L1MD3 LINE L1 7696 7928 -67 1840 149 24 24 chr4 2884846 2885175 -181403487 + MER44D DNA MER2_type 11 609 0 403 92 0 0 chr4 2885175 2885240 -181403422 + L1MC3 LINE L1 7721 7785 0 1498 166 6 110 chr4 2885461 2885650 -181403012 - AluJb SINE Alu -9 293 86 2111 89 10 3 chr4 2885650 2885943 -181402719 + AluSc SINE Alu 1 295 -14 1498 166 6 110 chr4 2885943 2885958 -181402704 - AluJb SINE Alu -216 86 71 1898 115 31 0 chr4 2885958 2886245 -181402417 + AluSq SINE Alu 1 296 -17 2181 82 3 0 chr4 2886253 2886545 -181402117 + AluY SINE Alu 16 308 -3 1498 166 6 110 chr4 2886545 2886656 -181402006 - AluJb SINE Alu -238 64 2 299 173 0 19 chr4 2886769 2886821 -181401841 - Alu SINE Alu -250 52 2 2304 223 106 66 chr4 2887168 2887770 -181400892 + L1ME1 LINE L1 2226 2802 -3344 2008 120 0 3 chr4 2887770 2888071 -181400591 + AluSg SINE Alu 1 300 -10 2304 223 106 66 chr4 2888071 2888103 -181400559 + L1ME1 LINE L1 2802 2831 -3315 2002 138 51 28 chr4 2888103 2888459 -181400203 - THE1B LTR MaLR 0 364 1 2304 223 106 66 chr4 2888459 2888491 -181400171 + L1ME1 LINE L1 2831 2860 -3286 2202 80 0 0 chr4 2888491 2888780 -181399882 + AluSc SINE Alu 17 305 -4 2304 223 106 66 chr4 2888780 2888805 -181399857 + L1ME1 LINE L1 2860 2883 -3263 814 206 6 24 chr4 2888805 2888970 -181399692 - FAM SINE Alu -13 162 1 2304 223 106 66 chr4 2888970 2889006 -181399656 + L1ME1 LINE L1 2883 2916 -3230 1812 151 10 3 chr4 2889006 2889310 -181399352 + AluSx SINE Alu 1 306 -6 2160 75 4 0 chr4 2889317 2889620 -181399042 + AluY SINE Alu 1 304 0 2304 223 106 66 chr4 2889620 2889705 -181398957 + L1ME1 LINE L1 2921 3001 -3145 1612 173 0 31 chr4 2889705 2889842 -181398820 + AluJo SINE Alu 3 143 -169 2458 56 0 0 chr4 2889842 2890145 -181398517 + AluY SINE Alu 1 303 -8 1612 173 0 31 chr4 2890145 2890325 -181398337 + AluJo SINE Alu 143 310 -2 2304 223 106 66 chr4 2890325 2890639 -181398023 + L1ME1 LINE L1 3001 3412 -2734 544 247 45 56 chr4 2890654 2890705 -181397957 + L1ME1 LINE L1 3609 3659 -2487 1272 181 17 0 chr4 2890705 2890937 -181397725 + MER46A DNA MER2_type 1 236 0 544 247 45 56 chr4 2890937 2891067 -181397595 + L1ME1 LINE L1 3659 3789 -2357 2091 88 3 10 chr4 2891067 2891417 -181397245 + AluY SINE Alu 14 311 0 2136 85 4 0 chr4 2891421 2891726 -181396936 + AluSp SINE Alu 4 309 0 544 247 45 56 chr4 2891726 2891804 -181396858 + L1ME1 LINE L1 3792 3872 -2274 1695 169 0 28 chr4 2891808 2892128 -181396534 + AluSx SINE Alu 1 311 -1 2022 133 0 3 chr4 2892128 2892429 -181396233 + AluSg SINE Alu 1 301 -9 460 214 12 89 chr4 2892429 2892458 -181396204 + L1ME1 LINE L1 5027 5057 -1089 2768 13 0 0 chr4 2892458 2892769 -181395893 + AluYa5 SINE Alu 1 311 0 460 214 12 89 chr4 2892769 2892907 -181395755 + L1ME1 LINE L1 5057 5181 -965 1972 126 7 10 chr4 2892918 2893228 -181395434 + AluSx SINE Alu 3 311 -1 1136 231 70 107 chr4 2893230 2893396 -181395266 + L1MB2 LINE L1 5024 5195 -976 1926 148 0 0 chr4 2893396 2893686 -181394976 + AluSx SINE Alu 1 290 -22 1136 231 70 107 chr4 2893686 2893782 -181394880 + L1MB2 LINE L1 5195 5293 -878 2177 91 7 0 chr4 2893782 2894080 -181394582 + AluSq SINE Alu 1 300 -13 1136 231 70 107 chr4 2894080 2894227 -181394435 + L1MB2 LINE L1 5293 5444 -727 1973 129 3 0 chr4 2894227 2894521 -181394141 + AluSx SINE Alu 1 295 -17 321 68 0 0 chr4 2894522 2894566 -181394096 + (CA)n Simple_repeat Simple_repeat 2 45 0 1136 231 70 107 chr4 2894566 2894602 -181394060 + L1MB2 LINE L1 5444 5480 -691 899 211 131 65 chr4 2894602 2894726 -181393936 + AluJo SINE Alu 1 115 -187 223 37 0 0 chr4 2894726 2894753 -181393909 + (TTA)n Simple_repeat Simple_repeat 2 180 0 1907 123 0 20 chr4 2894753 2895046 -181393616 - AluSq SINE Alu -26 287 1 899 211 131 65 chr4 2895046 2895082 -181393580 + AluJo SINE Alu 112 291 -9 681 180 9 0 chr4 2895082 2895193 -181393469 + AluSq/x SINE Alu 14 125 -188 1136 231 70 107 chr4 2895195 2895655 -181393007 + L1MB2 LINE L1 5480 5921 -250 * 2236 234 58 30 chr4 2895213 2895850 -181392812 + L1ME1 LINE L1 5468 6122 -44 1308 189 10 69 chr4 2895861 2895992 -181392670 + AluJo SINE Alu 1 138 -174 2208 92 0 0 chr4 2895992 2896284 -181392378 - AluSg SINE Alu -18 292 1 1308 189 10 69 chr4 2896284 2896458 -181392204 + AluJo SINE Alu 138 288 -24 730 247 105 34 chr4 2896513 2896859 -181391803 + L1ME3A LINE L1 5556 5932 -234 2379 75 0 0 chr4 2896859 2897164 -181391498 + AluSx SINE Alu 1 305 -7 730 247 105 34 chr4 2897164 2897209 -181391453 + L1ME3A LINE L1 5932 5972 -194 1184 216 7 49 chr4 2897265 2897432 -181391230 - AluJo SINE Alu -14 298 148 2126 94 0 10 chr4 2897432 2897731 -181390931 - AluSg SINE Alu -14 296 1 1184 216 7 49 chr4 2897731 2897869 -181390793 - AluJo SINE Alu -164 148 6 1956 122 0 46 chr4 2898249 2898576 -181390086 - AluSx SINE Alu 0 312 1 762 148 0 87 chr4 2898584 2898733 -181389929 - AluJb SINE Alu -173 139 4 1933 126 3 7 chr4 2898765 2899066 -181389596 + AluSc SINE Alu 1 300 -9 1926 96 0 83 chr4 2899707 2899846 -181388816 + AluSx SINE Alu 1 99 -213 1929 125 31 0 chr4 2899846 2900133 -181388529 + AluSg SINE Alu 1 296 -14 1926 96 0 83 chr4 2900133 2900317 -181388345 + AluSx SINE Alu 99 297 -15 2193 97 0 0 chr4 2900415 2900704 -181387958 + AluSc SINE Alu 9 297 -12 850 140 0 14 chr4 2900793 2900936 -181387726 - AluSc SINE Alu -5 304 164 1201 98 6 0 chr4 2900941 2901105 -181387557 - AluSp SINE Alu -91 222 58 2194 97 3 42 chr4 3001203 3001345 -181287317 + AluSg SINE Alu 1 147 -163 2507 74 0 0 chr4 3001345 3001643 -181287019 + AluY SINE Alu 1 298 -13 2194 97 3 42 chr4 3001643 3001811 -181286851 + AluSg SINE Alu 147 299 -11 2016 132 35 0 chr4 3001939 3002227 -181286435 + AluSg SINE Alu 2 299 -11 2041 142 10 0 chr4 3003363 3003666 -181284996 + AluJb SINE Alu 1 306 -6 1367 163 106 12 chr4 3004253 3004498 -181284164 + AluJb SINE Alu 1 268 -44 764 177 0 0 chr4 3004544 3004668 -181283994 + FLAM_C SINE Alu 1 124 -9 37 23 0 0 chr4 3004668 3004712 -181283950 + AT_rich Low_complexity Low_complexity 1 44 0 1662 108 123 0 chr4 3004942 3005210 -181283452 + AluSx SINE Alu 1 301 -1 2419 62 3 7 chr4 3005916 3006206 -181282456 + AluSc SINE Alu 1 289 -20 1532 215 19 25 chr4 3006464 3006831 -181281831 + MLT1A1 LTR MaLR 1 365 0 2182 130 0 7 chr4 3007108 3007416 -181281246 - AluJb SINE Alu 0 312 7 318 313 120 37 chr4 3007603 3007903 -181280759 + L2 LINE L2 2478 2802 -512 545 245 38 43 chr4 3008055 3008239 -181280423 + LTR41 LTR ERVL 1 183 -590 1991 103 51 7 chr4 3008536 3008828 -181279834 - AluSq SINE Alu -8 305 1 306 320 53 34 chr4 3008897 3009103 -181279559 + L2 LINE L2 3084 3293 -20 423 269 113 76 chr4 3009268 3009404 -181279258 + L1MEc LINE L1 744 874 -5522 1906 156 3 19 chr4 3009404 3009719 -181278943 + AluSx SINE Alu 1 310 -2 1415 123 19 182 chr4 3009728 3010101 -181278561 + AluYb8 SINE Alu 3 314 -4 423 269 113 76 chr4 3010101 3010365 -181278297 + L1MEc LINE L1 881 1134 -5262 2080 109 0 4 chr4 3010365 3010499 -181278163 + AluSx SINE Alu 3 136 -176 2343 99 3 3 chr4 3010499 3010803 -181277859 + AluSp SINE Alu 1 304 -9 2080 109 0 4 chr4 3010803 3010942 -181277720 + AluSx SINE Alu 136 275 -37 225 0 0 0 chr4 3010947 3010972 -181277690 + (TAAA)n Simple_repeat Simple_repeat 1 25 0 423 269 113 76 chr4 3010972 3011287 -181277375 + L1MEc LINE L1 1137 1503 -4893 1029 266 146 8 chr4 3011328 3011829 -181276833 + L1MEc LINE L1 1575 2144 -4252 1968 142 13 13 chr4 3011831 3012141 -181276521 + AluSg SINE Alu 1 310 0 1477 189 71 27 chr4 3012146 3012443 -181276219 + AluJb SINE Alu 1 310 -2 963 178 56 10 chr4 3012443 3012640 -181276022 + Tigger3b DNA MER2_type 341 546 -685 2516 62 3 0 chr4 3012663 3012976 -181275686 + AluY SINE Alu 1 314 0 716 165 0 0 chr4 3012976 3013091 -181275571 - AluJo/FLAM SINE Alu -196 116 2 2274 101 20 0 chr4 3013096 3013392 -181275270 - AluSp SINE Alu -11 302 1 1254 122 57 57 chr4 3013392 3013605 -181275057 + Tigger3b DNA MER2_type 968 1183 -1846 2224 114 7 0 chr4 3013605 3013912 -181274750 - AluSg SINE Alu -1 309 1 1254 122 57 57 chr4 3013912 3013943 -181274719 + Tigger3b DNA MER2_type 1182 1212 -20 233 218 91 0 chr4 3014058 3014113 -181274549 + Tigger3b DNA MER2_type 489 548 -684 2131 136 0 10 chr4 3014142 3014451 -181274211 + AluSg SINE Alu 1 306 -4 320 260 81 16 chr4 3014461 3014584 -181274078 + L1M4 LINE L1 3826 3956 -2190 1181 132 64 15 chr4 3014585 3014789 -181273873 + AluSc SINE Alu 94 307 -2 2199 86 14 7 chr4 3014815 3015105 -181273557 + AluSx SINE Alu 13 304 -8 555 188 45 15 chr4 3015242 3015375 -181273287 + FLAM_C SINE Alu 7 143 0 2251 98 7 0 chr4 3015393 3015689 -181272973 + AluSx SINE Alu 1 298 -14 2223 111 10 0 chr4 3023247 3023545 -181265117 + AluSq SINE Alu 1 301 -12 2191 109 23 0 chr4 3023548 3023851 -181264811 + AluSq SINE Alu 4 313 0 2325 103 3 6 chr4 3023851 3024207 -181264455 + AluSp SINE Alu 1 355 0 1700 172 36 3 chr4 3024614 3024916 -181263746 + AluJb SINE Alu 1 312 0 269 109 22 0 chr4 3025524 3025570 -181263092 + CT-rich Low_complexity Low_complexity 2 48 0 1906 170 0 16 chr4 3025885 3026202 -181262460 + AluJb SINE Alu 1 312 0 1898 161 23 0 chr4 3026273 3026572 -181262090 + AluSx SINE Alu 1 306 -6 1320 127 150 9 chr4 3026801 3027021 -181261641 + AluSg1 SINE Alu 55 305 -4 2356 70 31 0 chr4 3027120 3027407 -181261255 + AluY SINE Alu 1 296 -15 2274 108 6 16 chr4 3027702 3028017 -181260645 + AluSx SINE Alu 1 312 0 1145 100 7 0 chr4 3028017 3028210 -181260452 + AluY SINE Alu 132 325 0 515 214 201 13 chr4 3028220 3028526 -181260136 + L1MC/D LINE L1 5327 5673 -587 629 162 8 8 chr4 3028663 3028780 -181259882 - FLAM_A SINE Alu -8 134 18 205 307 110 24 chr4 3029166 3029293 -181259369 - MIR3 SINE MIR -41 167 30 1546 163 3 83 chr4 3029562 3029862 -181258800 + AluJo SINE Alu 7 282 -30 1325 105 6 0 chr4 3029862 3030034 -181258628 - AluSg/x SINE Alu -6 304 132 2087 98 59 0 chr4 3030034 3030320 -181258342 - AluSg SINE Alu -7 303 1 265 297 148 33 chr4 3031457 3031639 -181257023 - MIR SINE MIR -7 255 53 2345 86 7 10 chr4 3032533 3032836 -181255826 - AluSg1 SINE Alu -7 302 1 21 0 0 0 chr4 3033104 3033125 -181255537 + AT_rich Low_complexity Low_complexity 1 21 0 2050 111 57 7 chr4 3033135 3033433 -181255229 + AluSp SINE Alu 1 313 0 2294 92 3 0 chr4 3033504 3033796 -181254866 - AluSx SINE Alu -19 293 1 853 187 177 5 chr4 3033805 3034003 -181254659 - AluSg/x SINE Alu -13 296 65 23 0 0 0 chr4 3034083 3034106 -181254556 + AT_rich Low_complexity Low_complexity 1 23 0 2107 119 10 10 chr4 3034224 3034526 -181254136 + AluSx SINE Alu 1 302 -10 2252 103 17 0 chr4 3034773 3035073 -181253589 + AluY SINE Alu 1 305 -6 2133 129 0 0 chr4 3035942 3036229 -181252433 + AluSg SINE Alu 1 287 -23 2093 90 13 33 chr4 3036767 3037067 -181251595 + AluSq SINE Alu 1 294 -19 219 281 18 0 chr4 3037203 3037260 -181251402 + MIR SINE MIR 154 211 -51 4262 77 2 13 chr4 3037669 3038010 -181250652 + LTR10C LTR ERV1 1 334 -257 2286 82 10 13 chr4 3038010 3038313 -181250349 + AluY SINE Alu 1 302 -9 4262 77 2 13 chr4 3038313 3038569 -181250093 + LTR10C LTR ERV1 334 591 0 1761 119 4 4 chr4 3038600 3038852 -181249810 + AluSg SINE Alu 56 307 -3 1841 104 8 8 chr4 3038919 3039169 -181249493 - AluSg SINE Alu -6 304 55 260 260 27 47 chr4 3039373 3039523 -181249139 + L2 LINE L2 2914 3060 -212 1414 193 4 40 chr4 3040375 3040467 -181248195 + AluJo SINE Alu 35 129 -183 2494 63 7 0 chr4 3040467 3040766 -181247896 - AluY SINE Alu -10 301 1 1414 193 4 40 chr4 3040766 3040948 -181247714 + AluJo SINE Alu 129 299 -13 2003 117 57 0 chr4 3040949 3041232 -181247430 + AluSq SINE Alu 1 299 -14 1364 155 5 0 chr4 3041233 3041446 -181247216 + AluSg/x SINE Alu 85 298 -12 1341 171 93 8 chr4 3041605 3041862 -181246800 - AluJo SINE Alu -33 279 1 262 203 98 26 chr4 3043093 3043229 -181245433 - MER5A DNA MER1_type -1 188 1 2177 102 30 10 chr4 3043570 3043873 -181244789 + AluSq SINE Alu 1 309 -4 493 248 81 6 chr4 3043908 3044069 -181244593 + MIR SINE MIR 84 256 -6 2088 97 39 4 chr4 3044200 3044502 -181244160 - AluSx SINE Alu 0 312 1 1523 189 0 23 chr4 3044960 3045099 -181243563 + AluJb SINE Alu 1 133 -179 2262 116 6 6 chr4 3045099 3045410 -181243252 + AluSx SINE Alu 1 311 -1 1523 189 0 23 chr4 3045410 3045535 -181243127 + AluJb SINE Alu 133 259 -53 526 275 54 45 chr4 3046450 3046672 -181241990 - MIR SINE MIR -32 230 7 183 278 134 0 chr4 3046736 3046833 -181241829 + L2 LINE L2 2330 2439 -875 187 256 289 0 chr4 3046854 3046944 -181241718 + L2 LINE L2 3198 3313 0 188 355 81 17 chr4 3047726 3047898 -181240764 - L2 LINE L2 -563 2751 2569 296 162 88 0 chr4 3048121 3048189 -181240473 - Tigger5 DNA MER2_type 0 2323 2250 429 103 0 0 chr4 3048555 3048613 -181240049 + AluJ/FLAM SINE Alu 2 59 -253 976 103 109 0 chr4 3048950 3049124 -181239538 - Tigger3(Golem) DNA MER2_type -73 2956 2764 2002 111 26 7 chr4 3049124 3049431 -181239231 + AluSq SINE Alu 1 313 0 2035 128 0 0 chr4 3049438 3049726 -181238936 - AluSx SINE Alu -21 291 4 213 211 57 0 chr4 3049866 3049930 -181238732 + MIR SINE MIR 70 139 -69 360 335 54 6 chr4 3050015 3050182 -181238480 - L2 LINE L2 0 3313 3139 1362 139 0 9 chr4 3051325 3051541 -181237121 + AluJb SINE Alu 85 298 -14 2092 121 0 0 chr4 3052693 3052982 -181235680 + AluSx SINE Alu 15 303 -9 1607 123 11 58 chr4 3053009 3053285 -181235377 + AluJb SINE Alu 1 263 -49 2317 92 66 20 chr4 3053514 3053862 -181234800 - THE1B LTR MaLR 0 364 1 12073 89 8 6 chr4 3053862 3055440 -181233222 - THE1B-int LTR MaLR 0 1580 1 2093 112 55 60 chr4 3055440 3055653 -181233009 - THE1B LTR MaLR 0 364 152 1983 139 3 0 chr4 3055653 3055947 -181232715 - AluSg SINE Alu -15 295 1 2093 112 55 60 chr4 3055947 3056099 -181232563 - THE1B LTR MaLR -212 152 1 327 256 34 0 chr4 3056099 3056169 -181232493 + FAM SINE Alu 18 60 -242 1640 128 0 0 chr4 3056169 3056404 -181232258 + AluSx SINE Alu 1 235 -77 327 256 34 0 chr4 3056404 3056434 -181232228 + FAM SINE Alu 60 88 -78 537 176 0 42 chr4 3056434 3056553 -181232109 + FAM SINE Alu 72 185 0 2151 99 10 3 chr4 3056560 3056863 -181231799 + AluSg SINE Alu 1 305 -5 425 245 86 15 chr4 3057332 3057486 -181231176 + MIR SINE MIR 16 179 -83 1030 172 17 67 chr4 3057540 3057613 -181231049 + AluJo SINE Alu 74 149 -163 2195 78 0 0 chr4 3057613 3057919 -181230743 + AluY SINE Alu 1 306 0 1030 172 17 67 chr4 3057919 3058082 -181230580 + AluJo SINE Alu 149 299 -13 10326 117 56 117 chr4 3058082 3058204 -181230458 - Tigger1 DNA MER2_type -210 2208 2080 2244 92 0 7 chr4 3058204 3058508 -181230154 - AluSp SINE Alu -11 302 1 10326 117 56 117 chr4 3058508 3058850 -181229812 - Tigger1 DNA MER2_type -338 2080 1719 2107 94 0 29 chr4 3058850 3059157 -181229505 - AluSc SINE Alu -11 298 1 1534 145 0 34 chr4 3059158 3059420 -181229242 - AluSx SINE Alu -18 294 42 1929 117 3 7 chr4 3059429 3059720 -181228942 - AluSg1 SINE Alu -19 290 1 10326 117 56 117 chr4 3059720 3059858 -181228804 - Tigger1 DNA MER2_type -707 1711 1566 1980 115 7 7 chr4 3059858 3060144 -181228518 - AluSx SINE Alu -19 293 8 10326 117 56 117 chr4 3060144 3060190 -181228472 - Tigger1 DNA MER2_type -852 1566 1519 2273 80 3 0 chr4 3060190 3060489 -181228173 - AluY SINE Alu -9 302 3 10326 117 56 117 chr4 3060489 3060631 -181228031 - Tigger1 DNA MER2_type -899 1519 1370 793 128 0 94 chr4 3060631 3060780 -181227882 - FLAM_C SINE Alu -7 136 2 10326 117 56 117 chr4 3060780 3061984 -181226678 - Tigger1 DNA MER2_type -1048 1370 198 2159 115 0 3 chr4 3061984 3062288 -181226374 + AluSx SINE Alu 1 303 -9 10326 117 56 117 chr4 3062288 3062452 -181226210 - Tigger1 DNA MER2_type -2220 198 26 185 182 164 0 chr4 3062501 3062556 -181226106 + L2 LINE L2 3232 3295 -18 386 267 80 13 chr4 3062587 3062737 -181225925 + MER106B DNA MER1_type 896 1055 -4 363 235 0 24 chr4 3062979 3063064 -181225598 + MIR SINE MIR 50 132 -76 23 0 0 0 chr4 3064338 3064361 -181224301 + GC_rich Low_complexity Low_complexity 1 23 0 1799 80 0 16 chr4 3065097 3065346 -181223316 - AluSq SINE Alu -68 245 1 2295 35 0 28 chr4 3065545 3065863 -181222799 - AluY SINE Alu 0 310 1 1667 168 0 35 chr4 3065863 3066177 -181222485 - AluJb SINE Alu -7 305 1 1473 171 27 40 chr4 3066471 3066769 -181221893 + AluJb SINE Alu 1 294 -18 1294 147 9 0 chr4 3066914 3067125 -181221537 + AluJo SINE Alu 86 298 -14 196 162 54 0 chr4 3067270 3067307 -181221355 + MER5A DNA MER1_type 64 102 -87 1364 187 128 8 chr4 3067729 3068171 -181220491 - MLT1H LTR MaLR -8 541 1 263 224 40 13 chr4 3068565 3068641 -181220021 + MLT1K LTR MaLR 448 525 -63 2052 97 20 17 chr4 3068748 3069047 -181219615 - AluSq SINE Alu -13 300 1 186 390 11 0 chr4 3069674 3069769 -181218893 + MIR SINE MIR 89 184 -78 315 196 9 103 chr4 3070011 3070118 -181218544 - MER53 DNA DNA 0 189 93 22 35 0 0 chr4 3070201 3070230 -181218432 + GC_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr4 3070766 3070787 -181217875 + GC_rich Low_complexity Low_complexity 1 21 0 1110 153 16 0 chr4 3071065 3071255 -181217407 - AluJb SINE Alu 0 312 120 2055 82 43 4 chr4 3072228 3072508 -181216154 + AluSc SINE Alu 14 304 -5 385 328 85 17 chr4 3072518 3072753 -181215909 + L1MC4 LINE L1 7699 7949 -93 310 211 0 0 chr4 3074778 3074830 -181213832 + MLT1C LTR MaLR 416 467 0 325 278 11 30 chr4 3074839 3074986 -181213676 + L1MC3 LINE L1 6207 7783 0 228 285 46 54 chr4 3075239 3075369 -181213293 + MIR SINE MIR 18 146 -62 1833 144 34 0 chr4 3076009 3076301 -181212361 + AluJo SINE Alu 1 302 -10 2264 85 3 0 chr4 3076433 3076728 -181211934 + AluSp SINE Alu 1 296 -17 626 198 0 9 chr4 3076732 3076838 -181211824 - FLAM_C SINE Alu -18 125 21 814 178 16 0 chr4 3076925 3077054 -181211608 + AluSq/x SINE Alu 2 132 -181 318 371 59 8 chr4 3077102 3077358 -181211304 + L1MC4 LINE L1 6768 7036 -1006 1795 139 42 0 chr4 3077555 3077721 -181210941 - AluSx SINE Alu -13 299 115 210 37 0 0 chr4 3077721 3077748 -181210914 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1795 139 42 0 chr4 3077748 3077868 -181210794 - AluSx SINE Alu -197 115 1 381 291 52 56 chr4 3077889 3078059 -181210603 + L1M4 LINE L1 5111 5280 -866 1505 175 73 0 chr4 3078059 3078333 -181210329 + AluJb SINE Alu 1 294 -18 2120 136 0 0 chr4 3078337 3078647 -181210015 + AluSx SINE Alu 1 310 -2 381 291 52 56 chr4 3078647 3078684 -181209978 + L1M4 LINE L1 5283 5322 -824 902 120 46 51 chr4 3078699 3078822 -181209840 + L1MA8 LINE L1 6116 6239 -52 2038 114 0 33 chr4 3078822 3078958 -181209704 + AluSx SINE Alu 1 140 -172 2055 127 0 16 chr4 3078958 3079272 -181209390 + AluSg1 SINE Alu 1 309 0 2038 114 0 33 chr4 3079272 3079442 -181209220 + AluSx SINE Alu 140 297 -15 902 120 46 51 chr4 3079442 3079493 -181209169 + L1MA8 LINE L1 6239 6289 -2 743 296 35 29 chr4 3079495 3079830 -181208832 + L1MC4a LINE L1 5256 5599 -844 260 305 149 15 chr4 3079976 3080176 -181208486 + L1MC4a LINE L1 5910 6156 -1652 2026 138 7 0 chr4 3080176 3080480 -181208182 - AluJb SINE Alu -6 306 1 260 305 149 15 chr4 3080480 3080548 -181208114 + L1MC4a LINE L1 6156 6214 -1594 317 324 20 7 chr4 3081280 3081428 -181207234 + (TCCA)n Simple_repeat Simple_repeat 3 152 0 205 188 0 42 chr4 3083399 3083447 -181205215 + C-rich Low_complexity Low_complexity 6 51 0 286 273 161 14 chr4 3084116 3084402 -181204260 + L2 LINE L2 2248 2575 -739 400 293 89 18 chr4 3084495 3084720 -181203942 + L2 LINE L2 2844 3084 -229 972 185 7 3 chr4 3085101 3085547 -181203115 + (TCCA)n Simple_repeat Simple_repeat 1 627 0 790 206 6 1 chr4 3085580 3086281 -181202381 + (TCCA)n Simple_repeat Simple_repeat 1 704 0 635 215 6 0 chr4 3086306 3086478 -181202184 + (TCCA)n Simple_repeat Simple_repeat 2 174 0 332 334 112 25 chr4 3086478 3086560 -181202102 - L2 LINE L2 0 3313 3239 2045 127 10 0 chr4 3086560 3086893 -181201769 + AluSx SINE Alu 1 312 0 332 334 112 25 chr4 3086893 3087124 -181201538 - L2 LINE L2 -74 3239 2973 275 279 38 13 chr4 3087231 3087310 -181201352 + MLT1K LTR MaLR 166 246 -342 285 268 89 18 chr4 3087387 3087499 -181201163 + MLT1K LTR MaLR 467 586 -2 1623 184 10 16 chr4 3091347 3091657 -181197005 - AluJb SINE Alu -2 310 3 1808 170 89 6 chr4 3091657 3092004 -181196658 + MSTB1 LTR MaLR 57 432 0 510 319 42 78 chr4 3092028 3092117 -181196545 + L1M4 LINE L1 4651 4742 -1404 1727 170 3 3 chr4 3092117 3092411 -181196251 + AluJo SINE Alu 1 294 -18 510 319 42 78 chr4 3092411 3092707 -181195955 + L1M4 LINE L1 4742 5022 -1124 1046 204 25 4 chr4 3093177 3093412 -181195250 + AluSx SINE Alu 61 300 -12 1378 130 51 16 chr4 3093412 3093665 -181194997 + L1MA5 LINE L1 6037 6298 -2 2209 78 0 7 chr4 3093724 3094017 -181194645 + AluSc SINE Alu 1 291 -18 664 165 51 173 chr4 3094017 3094271 -181194391 - L1ME LINE L1 -347 5819 5597 2000 109 3 7 chr4 3094273 3094557 -181194105 - AluSg SINE Alu -14 296 14 2259 76 3 3 chr4 3094557 3094858 -181193804 - AluY SINE Alu -10 301 1 1749 155 7 17 chr4 3094862 3095159 -181193503 - AluJb SINE Alu -7 305 12 603 199 99 53 chr4 3095172 3095454 -181193208 - L1ME LINE L1 -1446 4700 4406 400 305 104 11 chr4 3095711 3095990 -181192672 - L2 LINE L2 -466 2848 2544 2050 96 4 4 chr4 3096287 3096568 -181192094 + AluSx SINE Alu 1 281 -31 195 42 0 0 chr4 3096572 3096596 -181192066 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 301 250 21 31 chr4 3096596 3096678 -181191984 + L1M4 LINE L1 3793 3875 -2271 1517 187 3 23 chr4 3096678 3096977 -181191685 + AluSx SINE Alu 1 293 -19 301 250 21 31 chr4 3096977 3096990 -181191672 + L1M4 LINE L1 3875 3887 -2259 2009 84 7 7 chr4 3097696 3097971 -181190691 - AluSx SINE Alu -12 300 26 281 26 26 0 chr4 3097989 3098027 -181190635 + (TTA)n Simple_repeat Simple_repeat 2 40 0 1670 143 0 38 chr4 3098034 3098192 -181190470 - AluJo SINE Alu -36 276 132 2316 68 0 7 chr4 3098192 3098488 -181190174 + AluY SINE Alu 1 294 -17 818 152 0 0 chr4 3098491 3098616 -181190046 - AluJo/FLAM SINE Alu -187 125 1 2857 10 3 3 chr4 3098640 3098951 -181189711 + AluYa5 SINE Alu 1 311 0 775 69 20 0 chr4 3098960 3099062 -181189600 + AluSq/x SINE Alu 1 104 -208 208 106 21 43 chr4 3099223 3099270 -181189392 + (CCCG)n Simple_repeat Simple_repeat 2 47 0 2004 102 22 0 chr4 3100500 3100775 -181187887 + AluSp SINE Alu 13 293 -20 2283 79 3 22 chr4 3100777 3101092 -181187570 + AluY SINE Alu 1 309 -2 1914 99 106 4 chr4 3101108 3101381 -181187281 + AluSx SINE Alu 1 301 -11 609 174 31 68 chr4 3101381 3101542 -181187120 + L1MA5 LINE L1 5756 5910 -390 2065 116 10 13 chr4 3101549 3101860 -181186802 - AluSg SINE Alu 0 310 1 1490 113 32 0 chr4 3101998 3102219 -181186443 - AluSq SINE Alu -85 228 1 1699 91 0 13 chr4 3102221 3102400 -181186262 - AluY SINE Alu -1 310 133 2445 38 3 14 chr4 3102400 3102710 -181185952 - AluY SINE Alu 0 311 1 1699 91 0 13 chr4 3102710 3102761 -181185901 - AluY SINE Alu -178 133 83 2144 101 3 63 chr4 3102763 3103081 -181185581 - AluSq SINE Alu -14 299 1 1407 187 56 21 chr4 3103191 3103475 -181185187 + AluJo SINE Alu 1 294 -18 440 306 0 9 chr4 3103533 3103644 -181185018 + FLAM_A SINE Alu 5 114 -19 2078 129 3 13 chr4 3103705 3104014 -181184648 + AluSg SINE Alu 1 306 -4 2386 60 30 13 chr4 3104404 3104705 -181183957 + AluSx SINE Alu 1 306 -6 807 157 0 0 chr4 3105520 3105641 -181183021 + AluSg/x SINE Alu 172 292 -18 1710 156 10 27 chr4 3107382 3107677 -181180985 + AluJo SINE Alu 1 290 -22 2038 129 36 3 chr4 3107920 3108222 -181180440 + AluSx SINE Alu 1 312 0 937 186 12 0 chr4 3108652 3108813 -181179849 - FRAM SINE Alu -13 163 1 1295 209 104 71 chr4 3109521 3109939 -181178723 - Charlie7 DNA MER1_type -111 2501 2052 2562 51 0 29 chr4 3109939 3110254 -181178408 + AluY SINE Alu 1 306 -5 1295 209 104 71 chr4 3110254 3110487 -181178175 - Charlie7 DNA MER1_type -560 2052 1828 2155 95 14 3 chr4 3110487 3110770 -181177892 - AluSx SINE Alu -18 294 9 331 176 71 188 chr4 3110877 3110979 -181177683 + L1ME3A LINE L1 5053 5165 -981 2134 122 3 3 chr4 3110979 3111274 -181177388 - AluSp SINE Alu -18 295 1 331 176 71 188 chr4 3111274 3111294 -181177368 + L1ME3A LINE L1 5165 5153 -993 2026 134 0 10 chr4 3111294 3111592 -181177070 - AluSx SINE Alu -17 295 1 331 176 71 188 chr4 3111592 3111638 -181177024 + L1ME3A LINE L1 5152 5202 -944 1151 274 114 34 chr4 3111666 3112283 -181176379 + L1ME3A LINE L1 5290 5985 -185 2417 94 3 0 chr4 3112283 3112590 -181176072 - AluSc SINE Alu -1 308 1 1151 274 114 34 chr4 3112590 3112763 -181175899 + L1ME3A LINE L1 5985 6143 -27 1311 99 6 0 chr4 3112793 3112965 -181175697 - AluSg/x SINE Alu -14 298 126 931 234 80 7 chr4 3113005 3113291 -181175371 + L1M4 LINE L1 4872 5178 -968 314 328 133 9 chr4 3113313 3113636 -181175026 + L1MCc LINE L1 -485 4294967173 -6031 253 291 53 82 chr4 3113882 3113961 -181174701 + L1MCc LINE L1 295 375 -5533 2081 116 19 35 chr4 3113961 3114271 -181174391 + AluSq SINE Alu 1 305 -8 253 291 53 82 chr4 3114271 3114397 -181174265 + L1MCc LINE L1 375 494 -5414 352 223 142 7 chr4 3114543 3114691 -181173971 + L1MCc LINE L1 1306 1465 -4961 194 159 45 0 chr4 3114745 3114789 -181173873 + GA-rich Low_complexity Low_complexity 3 48 0 1496 158 85 12 chr4 3114813 3115072 -181173590 + AluJo SINE Alu 14 291 -21 533 291 46 37 chr4 3115087 3115282 -181173380 + L1MCc LINE L1 1654 1846 -4761 2099 110 9 31 chr4 3115282 3115600 -181173062 + AluY SINE Alu 1 311 0 533 291 46 37 chr4 3115600 3115680 -181172982 + L1MCc LINE L1 1846 1924 -4683 2114 123 13 7 chr4 3115680 3115989 -181172673 + AluSx SINE Alu 1 311 -1 533 291 46 37 chr4 3115989 3116062 -181172600 + L1MCc LINE L1 1924 2006 -4601 2431 54 3 3 chr4 3116080 3116374 -181172288 - AluY SINE Alu -4 307 14 1708 171 17 38 chr4 3116398 3116742 -181171920 - MSTB LTR MaLR -49 377 41 4491 101 14 75 chr4 3116742 3117501 -181171161 - L1PA12 LINE L1 -9 6159 5447 1896 181 0 3 chr4 3117515 3117818 -181170844 - AluJb SINE Alu -10 302 1 1356 69 0 29 chr4 3117847 3118022 -181170640 - AluSx SINE Alu -142 170 1 733 149 0 41 chr4 3118073 3118194 -181170468 + FLAM_C SINE Alu 2 117 -26 452 108 0 0 chr4 3118198 3118263 -181170399 + AluJ/FRAM SINE Alu 230 294 -8 * 2044 123 131 44 chr4 3118258 3118664 -181169998 + Tigger2 DNA MER2_type 2278 2718 0 487 283 26 58 chr4 3118694 3118885 -181169777 + MIR SINE MIR 75 259 -3 815 174 84 7 chr4 3119007 3119162 -181169500 + AluJb SINE Alu 140 306 -6 319 297 14 0 chr4 3119226 3119300 -181169362 + L2 LINE L2 3198 3272 0 2227 133 0 0 chr4 3119516 3119824 -181168838 + AluSx SINE Alu 1 308 -4 297 95 0 0 chr4 3120037 3120079 -181168583 + Alu SINE Alu 253 294 -6 372 311 45 8 chr4 3120379 3120511 -181168151 + MIR SINE MIR 92 228 -34 346 230 0 58 chr4 3120569 3120656 -181168006 + AluSg/x SINE Alu 136 217 -83 824 204 14 0 chr4 3120670 3120817 -181167845 - FAM SINE Alu -36 149 1 2080 106 0 11 chr4 3120840 3121146 -181167516 + AluSg SINE Alu 3 305 0 2383 90 3 0 chr4 3121471 3121770 -181166892 + AluSx SINE Alu 2 301 -11 26 64 0 0 chr4 3122428 3122475 -181166187 + AT_rich Low_complexity Low_complexity 1 47 0 294 315 207 9 chr4 3122605 3122818 -181165844 + L2 LINE L2 2109 2363 -951 599 275 174 12 chr4 3123069 3123446 -181165216 + L2 LINE L2 2628 3060 -253 1571 97 14 0 chr4 3123984 3124191 -181164471 - AluSc SINE Alu -91 218 9 2100 93 0 83 chr4 3124289 3124473 -181164189 - AluSx SINE Alu -15 297 150 2073 125 31 0 chr4 3124473 3124760 -181163902 - AluSg SINE Alu -14 296 1 2100 93 0 83 chr4 3124760 3124899 -181163763 - AluSx SINE Alu -162 150 1 2080 126 3 7 chr4 3125539 3125840 -181162822 - AluSc SINE Alu -9 300 1 782 148 0 87 chr4 3125872 3126021 -181162641 + AluJb SINE Alu 4 139 -173 2123 122 3 40 chr4 3126029 3126350 -181162312 + AluSq SINE Alu 1 309 -4 1378 219 7 49 chr4 3126737 3126875 -181161787 + AluJo SINE Alu 6 148 -164 2268 94 0 10 chr4 3126875 3127174 -181161488 + AluSg SINE Alu 1 296 -14 1378 219 7 49 chr4 3127174 3127341 -181161321 + AluJo SINE Alu 148 298 -14 2421 79 7 0 chr4 3127442 3127745 -181160917 - AluSx SINE Alu -7 305 1 677 246 102 29 chr4 3127773 3128086 -181160576 - L1ME3A LINE L1 -273 5897 5562 1449 189 10 69 chr4 3128146 3128320 -181160342 - AluJo SINE Alu -24 288 138 2351 92 0 0 chr4 3128320 3128612 -181160050 + AluSg SINE Alu 1 292 -18 1449 189 10 69 chr4 3128612 3128743 -181159919 - AluJo SINE Alu -174 138 1 2088 201 89 99 chr4 3128754 3129409 -181159253 - L1ME1 LINE L1 -44 6122 5462 949 211 131 65 chr4 3129409 3129558 -181159104 - AluJo SINE Alu -9 293 155 1957 120 10 24 chr4 3129558 3129876 -181158786 + AluSq SINE Alu 1 314 0 949 211 131 65 chr4 3129876 3130000 -181158662 - AluJo SINE Alu -147 155 1 2088 201 89 99 chr4 3130000 3130036 -181158626 - L1ME1 LINE L1 -704 5462 5427 321 68 0 0 chr4 3130036 3130080 -181158582 + (TG)n Simple_repeat Simple_repeat 2 45 0 2040 125 4 0 chr4 3130081 3130361 -181158301 - AluSx SINE Alu -17 295 15 2088 201 89 99 chr4 3130361 3130520 -181158142 - L1ME1 LINE L1 -739 5427 5268 2331 90 7 0 chr4 3130520 3130819 -181157843 - AluSq SINE Alu -12 301 1 2088 201 89 99 chr4 3130819 3130910 -181157752 - L1ME1 LINE L1 -898 5268 5178 1998 157 3 0 chr4 3130910 3131204 -181157458 - AluSx SINE Alu -17 295 1 2088 201 89 99 chr4 3131204 3131370 -181157292 - L1ME1 LINE L1 -988 5178 5024 2092 125 6 13 chr4 3131372 3131683 -181156979 - AluSx SINE Alu -1 311 3 429 214 12 89 chr4 3131694 3131832 -181156830 - L1ME3A LINE L1 -965 5181 5057 2856 16 3 0 chr4 3131832 3132142 -181156520 - AluYa5 SINE Alu 0 311 1 429 214 12 89 chr4 3132142 3132171 -181156491 - L1ME3A LINE L1 -1089 5057 5027 2172 133 0 3 chr4 3132171 3132473 -181156189 - AluSg SINE Alu -9 301 1 1851 169 0 28 chr4 3132473 3132792 -181155870 - AluSx SINE Alu -1 311 1 466 266 38 49 chr4 3132796 3132874 -181155788 - L1ME3A LINE L1 -2274 3872 3795 2258 89 4 0 chr4 3132874 3133179 -181155483 - AluSp SINE Alu 0 309 4 2266 85 3 10 chr4 3133183 3133533 -181155129 - AluY SINE Alu 0 311 14 466 266 38 49 chr4 3133533 3133663 -181154999 - L1ME3A LINE L1 -2354 3792 3659 1281 181 17 0 chr4 3133663 3133895 -181154767 - MER46A DNA MER2_type 0 236 1 466 266 38 49 chr4 3133895 3133946 -181154716 - L1ME3A LINE L1 -2487 3659 3609 2195 227 109 66 chr4 3133961 3134275 -181154387 - L1ME3A LINE L1 -2734 3412 3113 1760 172 0 35 chr4 3134275 3134455 -181154207 - AluJo SINE Alu -2 310 144 2592 56 0 0 chr4 3134455 3134757 -181153905 - AluY SINE Alu -9 302 1 1760 172 0 35 chr4 3134757 3134895 -181153767 - AluJo SINE Alu -168 144 3 2195 227 109 66 chr4 3134895 3134980 -181153682 - L1ME3A LINE L1 -3033 3113 3033 2313 68 4 0 chr4 3134980 3135283 -181153379 - AluY SINE Alu 0 304 1 1961 151 10 3 chr4 3135290 3135594 -181153068 - AluSx SINE Alu -6 306 1 2195 227 109 66 chr4 3135594 3135630 -181153032 - L1ME3A LINE L1 -3118 3028 2995 844 208 6 24 chr4 3135630 3135798 -181152864 + FAM SINE Alu 1 165 -10 2195 227 109 66 chr4 3135798 3135820 -181152842 - L1ME3A LINE L1 -3151 2995 2975 2283 83 3 0 chr4 3135820 3136108 -181152554 - AluSc SINE Alu -4 305 17 2195 227 109 66 chr4 3136108 3136140 -181152522 - L1ME3A LINE L1 -3171 2975 2946 2029 138 51 28 chr4 3136140 3136496 -181152166 + THE1B LTR MaLR 1 364 0 2195 227 109 66 chr4 3136496 3136528 -181152134 - L1ME3A LINE L1 -3200 2946 2917 2208 113 0 3 chr4 3136528 3136829 -181151833 - AluSg SINE Alu -10 300 1 2195 227 109 66 chr4 3136829 3137431 -181151231 - L1ME3A LINE L1 -3229 2917 2226 275 173 0 19 chr4 3137778 3137830 -181150832 + Alu SINE Alu 2 52 -247 1546 172 3 107 chr4 3137943 3138054 -181150608 + AluJb SINE Alu 2 123 -179 2268 83 10 0 chr4 3138054 3138344 -181150318 - AluY SINE Alu -3 308 16 2037 115 31 0 chr4 3138352 3138639 -181150023 - AluSq SINE Alu -17 296 1 1546 172 3 107 chr4 3138639 3138654 -181150008 + AluJb SINE Alu 130 145 -157 2251 89 10 3 chr4 3138654 3138947 -181149715 - AluSc SINE Alu -14 295 1 1546 172 3 107 chr4 3138947 3139136 -181149526 + AluJb SINE Alu 145 293 -9 390 92 0 0 chr4 3139357 3139422 -181149240 - L1MC3 LINE L1 0 7785 7721 1755 149 24 24 chr4 3139422 3139751 -181148911 - MER44D DNA MER2_type 0 609 11 790 181 99 45 chr4 3139776 3139997 -181148665 - L1MD3 LINE L1 -67 7928 7696 2335 92 0 7 chr4 3140114 3140408 -181148254 + AluSc SINE Alu 1 292 -17 2091 136 13 7 chr4 3140434 3140744 -181147918 + AluSx SINE Alu 1 312 0 1189 210 5 0 chr4 3140859 3141083 -181147579 - AluJo SINE Alu -46 266 42 2042 149 7 0 chr4 3141161 3141462 -181147200 + AluSx SINE Alu 1 303 -9 289 234 9 56 chr4 3141646 3141753 -181146909 - MIR3 SINE MIR -1 207 106 894 213 0 18 chr4 3141867 3142036 -181146626 - AluJ SINE Alu 0 302 137 2201 92 58 3 chr4 3142388 3142683 -181145979 - AluSq SINE Alu -2 311 1 825 140 0 37 chr4 3143257 3143393 -181145269 - AluJ SINE Alu -181 131 1 1977 150 3 7 chr4 3143623 3143923 -181144739 - AluSx SINE Alu -13 299 1 2386 96 0 0 chr4 3143934 3144237 -181144425 - AluSx SINE Alu -9 303 1 278 310 14 0 chr4 3144487 3144558 -181144104 + MIR3 SINE MIR 114 185 -23 1707 160 11 14 chr4 3144606 3144888 -181143774 + AluJo SINE Alu 1 281 -31 2195 99 3 3 chr4 3145065 3145359 -181143303 - AluSg SINE Alu -5 305 12 2443 91 3 0 chr4 3145374 3145681 -181142981 - AluSg SINE Alu -2 308 1 669 163 114 8 chr4 3145862 3145985 -181142677 + FLAM_C SINE Alu 3 138 -5 1100 251 122 15 chr4 3146009 3146420 -181142242 + Charlie7 DNA MER1_type 409 863 -1749 1756 155 33 16 chr4 3146518 3146821 -181141841 - AluJb SINE Alu -4 308 1 1563 203 128 91 chr4 3147060 3147234 -181141428 + Charlie7 DNA MER1_type 926 1092 -1520 1557 161 36 23 chr4 3147234 3147539 -181141123 - AluJo SINE Alu -3 309 1 1563 203 128 91 chr4 3147539 3147693 -181140969 + Charlie7 DNA MER1_type 1092 1239 -1373 2186 123 7 0 chr4 3147693 3147994 -181140668 - AluSc SINE Alu -6 303 1 1563 203 128 91 chr4 3147994 3148486 -181140176 + Charlie7 DNA MER1_type 1239 1777 -835 2428 69 0 26 chr4 3148490 3148793 -181139869 - AluY SINE Alu -16 295 1 2226 84 0 4 chr4 3148793 3149068 -181139594 - AluSg SINE Alu -10 300 27 2367 103 7 3 chr4 3149068 3149377 -181139285 - AluY SINE Alu 0 311 1 1013 222 23 82 chr4 3149377 3149430 -181139232 + L1 LINE L1 3535 3590 -2556 2138 142 0 0 chr4 3149430 3149733 -181138929 + AluSq SINE Alu 1 303 -10 2225 70 13 61 chr4 3149733 3150048 -181138614 + AluY SINE Alu 1 298 -13 1013 222 23 82 chr4 3150048 3150178 -181138484 + L1 LINE L1 3589 3725 -2421 2222 101 0 10 chr4 3150178 3150474 -181138188 + AluSq SINE Alu 1 293 -20 1013 222 23 82 chr4 3150474 3150603 -181138059 + L1 LINE L1 3725 3860 -2286 1816 118 0 99 chr4 3150603 3150935 -181137727 + AluSx SINE Alu 2 300 -12 1013 222 23 82 chr4 3150935 3151161 -181137501 + L1 LINE L1 3860 4242 -1904 2341 103 0 0 chr4 3151161 3151473 -181137189 + AluSx SINE Alu 1 312 0 656 223 47 63 chr4 3151536 3151664 -181136998 + L1 LINE L1 5174 5300 -846 2302 67 0 0 chr4 3151664 3151971 -181136691 + AluY SINE Alu 2 308 0 656 223 47 63 chr4 3151971 3152047 -181136615 + L1 LINE L1 5300 5376 -770 667 231 0 8 chr4 3152048 3152182 -181136480 + AluJb SINE Alu 171 303 -9 754 183 47 26 chr4 3152185 3152367 -181136295 + L1MB4 LINE L1 5959 6136 -47 693 206 15 0 chr4 3152367 3152498 -181136164 + AluJo/FLAM SINE Alu 1 133 -169 1938 106 4 4 chr4 3152498 3152773 -181135889 + AluSp SINE Alu 38 312 -1 1790 119 0 119 chr4 3152773 3153108 -181135554 + AluY SINE Alu 2 296 -5 2336 88 0 0 chr4 3153113 3153409 -181135253 + AluSq SINE Alu 1 296 -17 754 183 47 26 chr4 3153409 3153443 -181135219 + L1MB4 LINE L1 6139 6176 -7 1168 150 235 45 chr4 3153603 3153794 -181134868 - Tigger3b DNA MER2_type -2481 547 394 1420 188 70 27 chr4 3153794 3154092 -181134570 - AluJb SINE Alu -1 311 1 1168 150 235 45 chr4 3154092 3154138 -181134524 - Tigger3b DNA MER2_type -2634 394 358 2085 97 7 29 chr4 3154138 3154474 -181134188 + AluSq SINE Alu 1 329 0 1168 150 235 45 chr4 3154474 3154714 -181133948 - Tigger3b DNA MER2_type -2670 358 1 223 25 50 25 chr4 3154792 3154832 -181133830 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 1319 109 0 0 chr4 3154839 3155014 -181133648 - AluSq SINE Alu -138 175 1 681 118 97 28 chr4 3155021 3155165 -181133497 - Tigger7 DNA MER2_type -27 2460 2307 2232 96 3 0 chr4 3155180 3155473 -181133189 - AluSg SINE Alu -15 295 2 528 148 0 0 chr4 3155495 3155576 -181133086 - FLAM SINE Alu -10 133 53 311 234 169 39 chr4 3155663 3155778 -181132884 - L1ME3A LINE L1 -300 5870 5771 2811 7 0 0 chr4 3155778 3156087 -181132575 + AluYb8 SINE Alu 1 309 -9 311 234 169 39 chr4 3156087 3156202 -181132460 - L1ME3A LINE L1 -399 5771 5610 * 705 231 77 10 chr4 3156201 3156398 -181132264 + L1 LINE L1 2831 3056 -3090 2412 55 0 3 chr4 3156398 3156691 -181131971 + AluY SINE Alu 1 292 -19 705 231 77 10 chr4 3156691 3156792 -181131870 + L1 LINE L1 3056 3149 -2997 2026 125 0 0 chr4 3156793 3157074 -181131588 + AluSx SINE Alu 1 281 -31 2312 99 0 0 chr4 3157089 3157391 -181131271 + AluSx SINE Alu 1 302 -10 2169 103 3 10 chr4 3157397 3157707 -181130955 + AluSp SINE Alu 6 313 0 2021 123 7 0 chr4 3157716 3158016 -181130646 + AluY SINE Alu 2 303 -8 552 242 114 14 chr4 3158019 3158238 -181130424 + L1 LINE L1 3299 3539 -2607 817 179 0 14 chr4 3159782 3159804 -181128858 - AluJo SINE Alu -174 138 117 306 0 0 0 chr4 3159804 3159838 -181128824 + (TG)n Simple_repeat Simple_repeat 2 35 0 817 179 0 14 chr4 3159838 3159955 -181128707 - AluJo SINE Alu -195 117 1 256 302 38 28 chr4 3162800 3162906 -181125756 + MIR SINE MIR 113 219 -43 305 290 57 8 chr4 3163327 3163451 -181125211 + MLT1J2 LTR MaLR 130 259 -191 210 351 84 30 chr4 3163562 3163693 -181124969 - MIR SINE MIR -106 156 19 1944 184 19 73 chr4 3164366 3164499 -181124163 + L1MB5 LINE L1 5680 5819 -355 2492 62 0 0 chr4 3164499 3164805 -181123857 + AluY SINE Alu 5 310 -1 1944 184 19 73 chr4 3164805 3165194 -181123468 + L1MB5 LINE L1 5819 6174 0 379 254 70 7 chr4 3166239 3166381 -181122281 + L1MEd LINE L1 454 604 -5926 300 286 51 46 chr4 3166828 3167018 -181121644 - MLT1H LTR MaLR -356 239 35 1982 85 12 0 chr4 3167404 3167662 -181121000 + AluSg SINE Alu 1 261 -49 284 319 58 21 chr4 3167924 3168115 -181120547 + HAL1 LINE L1 1516 1713 -794 367 369 83 23 chr4 3168340 3168719 -181119943 + L1MEd LINE L1 2316 2757 -3905 2213 116 0 0 chr4 3168899 3169200 -181119462 - AluSx SINE Alu -11 301 1 2282 106 3 3 chr4 3169212 3169524 -181119138 - AluSx SINE Alu 0 312 1 1025 152 0 39 chr4 3170257 3170435 -181118227 + FRAM SINE Alu 1 169 -7 1668 228 69 61 chr4 3170448 3170999 -181117663 - L1MB5 LINE L1 -13 6161 5603 2225 68 41 7 chr4 3170999 3171294 -181117368 - AluY SINE Alu -6 305 1 1668 228 69 61 chr4 3171294 3171335 -181117327 - L1MB5 LINE L1 -571 5603 5564 2117 123 0 13 chr4 3171338 3171647 -181117015 - AluSq SINE Alu -8 305 1 3142 86 35 5 chr4 3174381 3174812 -181113850 + MLT2A1 LTR ERVL 1 444 0 269 322 96 9 chr4 3175734 3175849 -181112813 - L2 LINE L2 -4 3309 3185 233 300 25 0 chr4 3175912 3175992 -181112670 - MLT1H LTR MaLR -388 161 80 295 323 158 29 chr4 3176734 3177050 -181111612 + L2 LINE L2 1552 1908 -1406 343 338 146 12 chr4 3177086 3177429 -181111233 + L2 LINE L2 2156 2544 -770 557 336 93 3 chr4 3177429 3177718 -181110944 + L1MD1 LINE L1 5687 6001 -241 * 1715 189 51 33 chr4 3177465 3177807 -181110855 + L1MB3 LINE L1 5741 6094 -89 2124 95 20 20 chr4 3177807 3178111 -181110551 - AluSx SINE Alu -8 304 1 1715 189 51 33 chr4 3178111 3178196 -181110466 + L1MB3 LINE L1 6094 6176 -7 455 271 12 66 chr4 3178268 3178434 -181110228 + L2 LINE L2 2617 2773 -541 351 233 33 0 chr4 3178705 3178795 -181109867 + MER20 DNA MER1_type 122 214 -5 206 239 0 0 chr4 3179791 3179837 -181108825 - L2 LINE L2 -19 3253 3208 1697 245 46 40 chr4 3180324 3180826 -181107836 + MLT1D LTR MaLR 1 505 0 303 240 21 0 chr4 3180963 3181059 -181107603 + L1ME3A LINE L1 5853 5950 -220 1544 128 4 0 chr4 3182498 3182724 -181105938 - AluSg/x SINE Alu -17 293 67 1393 94 0 62 chr4 3182731 3182940 -181105722 + AluSg/x SINE Alu 103 299 -13 1331 167 27 0 chr4 3182940 3183198 -181105464 + L1MB3 LINE L1 5919 6183 0 1393 94 0 62 chr4 3183198 3183212 -181105450 + AluSg/x SINE Alu 299 312 0 305 314 0 12 chr4 3183245 3183331 -181105331 + L1MEc LINE L1 1875 1959 -4437 1191 244 121 37 chr4 3184266 3184697 -181103965 - MLT1C LTR MaLR 0 467 1 26 0 0 0 chr4 3187587 3187613 -181101049 + GC_rich Low_complexity Low_complexity 1 26 0 1487 199 125 36 chr4 3187857 3188173 -181100489 - MSTC LTR MaLR 0 428 69 1983 129 0 0 chr4 3188173 3188467 -181100195 - AluSx SINE Alu -18 294 1 1487 199 125 36 chr4 3188467 3188542 -181100120 - MSTC LTR MaLR -359 69 2 266 324 14 0 chr4 3190871 3190945 -181097717 + Charlie2b DNA MER1_type 679 753 -2029 2387 107 11 22 chr4 3191139 3191495 -181097167 - THE1A LTR MaLR -1 354 3 11205 75 4 9 chr4 3191497 3191567 -181097095 - THE1A-int LTR MaLR 0 1580 1511 2681 93 6 0 chr4 3191567 3191920 -181096742 + THE1A LTR MaLR 1 355 0 11205 75 4 9 chr4 3191920 3192961 -181095701 - THE1A-int LTR MaLR -69 1511 478 2117 138 0 0 chr4 3192961 3193266 -181095396 + AluSx SINE Alu 1 305 -7 11205 75 4 9 chr4 3193266 3193742 -181094920 - THE1A-int LTR MaLR -1102 478 1 2540 97 17 3 chr4 3193742 3194092 -181094570 - THE1A LTR MaLR 0 355 1 993 276 64 60 chr4 3194130 3194662 -181094000 + Charlie2 DNA MER1_type 1886 2419 -443 1382 152 0 0 chr4 3194662 3194872 -181093790 + AluSg/x SINE Alu 83 292 -20 461 277 101 55 chr4 3194876 3195241 -181093421 + Charlie2 DNA MER1_type 2404 2785 -77 261 281 76 49 chr4 3196054 3196239 -181092423 + L1MEd LINE L1 1068 1257 -4862 1243 174 45 74 chr4 3196265 3196312 -181092350 + MER7A DNA MER2_type 35 82 -2956 2084 131 0 3 chr4 3196312 3196610 -181092052 - AluSx SINE Alu -15 297 1 1243 174 45 74 chr4 3196610 3196872 -181091790 + MER7A DNA MER2_type 82 333 -13 262 384 57 11 chr4 3196883 3197146 -181091516 + HAL1 LINE L1 1376 1650 -857 744 239 119 0 chr4 3198737 3198988 -181089674 + L1MB3 LINE L1 5895 6175 -8 228 86 0 0 chr4 3199223 3199258 -181089404 + (TA)n Simple_repeat Simple_repeat 2 36 0 636 125 158 33 chr4 3199260 3199380 -181089282 - AluJb SINE Alu -11 301 167 1230 186 19 0 chr4 3199499 3199714 -181088948 - AluJb SINE Alu -93 219 1 2201 95 3 16 chr4 3200027 3200342 -181088320 - AluSx SINE Alu -1 311 1 208 286 18 0 chr4 3200392 3200448 -181088214 + MIR SINE MIR 89 145 -63 480 320 90 48 chr4 3200926 3201238 -181087424 + L2 LINE L2 2067 2391 -923 343 284 0 71 chr4 3201317 3201472 -181087190 + L2 LINE L2 2627 2770 -544 602 302 61 63 chr4 3202970 3203381 -181085281 + MLT1J LTR MaLR 101 510 -1 768 190 135 6 chr4 3203455 3203618 -181085044 + AluSg/x SINE Alu 116 299 -11 373 363 73 12 chr4 3203624 3203883 -181084779 + L1MC/D LINE L1 5445 5719 -2089 299 160 35 128 chr4 3203886 3203975 -181084687 - MLT1C LTR MaLR -353 114 18 2347 68 0 3 chr4 3203975 3204269 -181084393 - AluY SINE Alu -18 293 1 1826 168 3 7 chr4 3204273 3204565 -181084097 - AluJo SINE Alu -21 291 1 647 197 15 38 chr4 3204567 3204699 -181083963 - FLAM_A SINE Alu -4 129 1 299 160 35 128 chr4 3204699 3204743 -181083919 - MLT1C LTR MaLR -453 14 1 2545 61 0 0 chr4 3205465 3205775 -181082887 + AluY SINE Alu 1 310 -1 365 268 101 0 chr4 3206158 3206296 -181082366 - L2 LINE L2 -318 2995 2844 * 392 312 211 19 chr4 3206282 3207110 -181081552 - L2 LINE L2 -788 2526 1540 755 276 174 2 chr4 3210055 3210508 -181078154 + HAL1 LINE L1 841 1371 -1136 1521 139 21 107 chr4 3210882 3211219 -181077443 - AluYb8 SINE Alu -10 308 1 180 111 0 0 chr4 3212069 3212096 -181076566 + (CGGTG)n Simple_repeat Simple_repeat 3 29 0 871 225 11 6 chr4 3212362 3212540 -181076122 + AluJo SINE Alu 113 291 -21 1388 130 57 57 chr4 3213299 3213561 -181075101 - AluJo SINE Alu -15 297 36 2238 84 20 0 chr4 3213707 3214005 -181074657 + AluSx SINE Alu 1 304 -8 1328 277 102 17 chr4 3214256 3214725 -181073937 + MLT1J LTR MaLR 2 510 -1 1616 271 88 18 chr4 3214904 3215575 -181073087 - L2 LINE L2 -905 2409 1692 45 75 0 22 chr4 3216549 3216683 -181071979 + GC_rich Low_complexity Low_complexity 1 131 0 21 57 0 0 chr4 3217878 3217913 -181070749 + GC_rich Low_complexity Low_complexity 1 35 0 808 163 0 15 chr4 3219858 3219875 -181068787 - FLAM_C SINE Alu -179 133 117 252 0 0 0 chr4 3219875 3219903 -181068759 + (TG)n Simple_repeat Simple_repeat 2 29 0 808 163 0 15 chr4 3219903 3220020 -181068642 - FLAM_C SINE Alu -195 117 1 233 265 59 0 chr4 3222865 3222933 -181065729 + MIR SINE MIR 113 184 -78 388 155 0 0 chr4 3272944 3273002 -181015660 - AluS SINE Alu -241 62 5 2169 92 14 7 chr4 3273161 3273476 -181015186 - AluSq SINE Alu 0 317 1 2229 73 49 0 chr4 3274383 3274670 -181013992 + AluY SINE Alu 1 301 -10 180 143 0 0 chr4 3274732 3274774 -181013888 + (T)n Simple_repeat Simple_repeat 1 42 0 505 135 0 0 chr4 3275306 3275380 -181013282 + FLAM_A SINE Alu 53 126 -16 1384 231 87 9 chr4 3275502 3275836 -181012826 - MLT1E LTR MaLR -8 585 226 606 263 44 12 chr4 3275862 3276022 -181012640 - MLT1E LTR MaLR -428 165 1 473 290 126 31 chr4 3276681 3277015 -181011647 + MLT1J LTR MaLR 38 440 -71 1783 150 46 4 chr4 3277017 3277297 -181011365 - AluJo SINE Alu -17 295 4 21 36 0 0 chr4 3277307 3277335 -181011327 + AT_rich Low_complexity Low_complexity 1 28 0 1968 121 4 0 chr4 3277438 3277710 -181010952 - AluSx SINE Alu -3 309 37 201 133 0 0 chr4 3277732 3277762 -181010900 + (CATA)n Simple_repeat Simple_repeat 3 32 0 22 70 0 0 chr4 3277857 3277900 -181010762 + AT_rich Low_complexity Low_complexity 1 43 0 6187 120 36 106 chr4 3277908 3278054 -181010608 + Tigger3b DNA MER2_type 2 157 -2871 2264 104 3 3 chr4 3278054 3278351 -181010311 - AluSq SINE Alu -16 297 1 6187 120 36 106 chr4 3278351 3279440 -181009222 + Tigger3b DNA MER2_type 157 1145 -1883 2076 156 3 9 chr4 3279440 3279779 -181008883 - MER1B DNA MER1_type 0 337 1 6187 120 36 106 chr4 3279779 3279841 -181008821 + Tigger3b DNA MER2_type 1145 1210 -21 232 208 194 14 chr4 3279960 3280032 -181008630 + LTR16A LTR ERVL 366 450 0 1014 250 122 22 chr4 3280032 3280392 -181008270 + HERV16 LTR ERVL 1 396 -4600 811 167 204 52 chr4 3280477 3280746 -181007916 - AluJb SINE Alu -2 310 1 2344 91 66 43 chr4 3280906 3281145 -181007517 - MER4A LTR ERV1 0 664 411 1983 146 7 0 chr4 3281145 3281440 -181007222 + AluSx SINE Alu 1 297 -15 2344 91 66 43 chr4 3281440 3281595 -181007067 - MER4A LTR ERV1 -253 411 261 640 110 0 20 chr4 3281601 3281701 -181006961 - MER4A LTR ERV1 -566 98 1 839 173 39 19 chr4 3281713 3281869 -181006793 + AluJb SINE Alu 129 287 -25 32 0 0 0 chr4 3281869 3281901 -181006761 + AT_rich Low_complexity Low_complexity 1 32 0 559 246 186 80 chr4 3282266 3282954 -181005708 - LTR41 LTR ERVL -12 761 1 2152 228 66 12 chr4 3282954 3283545 -181005117 + HERV16 LTR ERVL 829 1451 -3545 2325 253 110 21 chr4 3283565 3284311 -181004351 + HERV16 LTR ERVL 1758 2569 -2427 627 263 100 11 chr4 3284371 3284561 -181004101 + HERV16 LTR ERVL 2721 2927 -2069 2241 85 7 43 chr4 3284564 3284869 -181003793 - AluSp SINE Alu -19 294 1 657 191 32 8 chr4 3284872 3284998 -181003664 - FLAM_A SINE Alu -1 141 13 873 317 117 15 chr4 3285170 3285690 -181002972 + HERV16 LTR ERVL 3116 3688 -2076 526 264 59 42 chr4 3285707 3285946 -181002716 + HERV16 LTR ERVL 3421 3663 -1333 1024 335 113 25 chr4 3286009 3286948 -181001714 + HERV16 LTR ERVL 4082 5103 -661 539 284 105 4 chr4 3287382 3287611 -181001051 + LTR16A LTR ERVL 102 353 -97 295 315 64 34 chr4 3287740 3288007 -181000655 - L1ME LINE L1 -239 5882 5605 393 176 0 0 chr4 3288085 3288159 -181000503 + (TA)n Simple_repeat Simple_repeat 1 74 0 325 314 38 9 chr4 3288290 3288395 -181000267 - L1ME LINE L1 -2191 5617 5510 252 286 8 17 chr4 3288455 3288574 -181000088 - L1P LINE L1 -785 5361 5244 2250 112 0 0 chr4 3288770 3289065 -180999597 - AluSx SINE Alu -17 295 1 25 0 0 0 chr4 3289097 3289122 -180999540 + AT_rich Low_complexity Low_complexity 1 25 0 379 278 65 12 chr4 3289191 3289360 -180999302 - L1ME LINE L1 -1627 4519 4342 371 240 0 0 chr4 3289374 3289449 -180999213 + MIR SINE MIR 4 78 -184 261 342 68 8 chr4 3290009 3290126 -180998536 - L2 LINE L2 0 3313 3190 191 292 0 56 chr4 3290255 3290327 -180998335 - L2 LINE L2 -217 3055 2988 1844 147 0 41 chr4 3290333 3290652 -180998010 + AluJo SINE Alu 1 306 -6 296 211 18 0 chr4 3290848 3290905 -180997757 + MIR SINE MIR 8 65 -197 483 179 0 0 chr4 3291177 3291280 -180997382 - AluJb SINE Alu 0 312 209 1492 138 0 5 chr4 3291313 3291523 -180997139 - AluJb SINE Alu -101 211 3 1313 202 102 76 chr4 3291530 3291718 -180996944 - Charlie2 DNA MER1_type -50 2812 2630 450 0 0 0 chr4 3291718 3291768 -180996894 + (TTA)n Simple_repeat Simple_repeat 2 51 0 2125 104 7 0 chr4 3291770 3292048 -180996614 - AluSx SINE Alu -30 282 3 378 0 0 0 chr4 3292053 3292095 -180996567 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 2099 111 14 0 chr4 3292098 3292378 -180996284 - AluSg SINE Alu -26 284 1 1841 157 7 14 chr4 3292380 3292719 -180995943 - AluJb SINE Alu 0 312 1 1313 202 102 76 chr4 3292719 3292991 -180995671 - Charlie2 DNA MER1_type -236 2626 2362 212 75 0 25 chr4 3292991 3293031 -180995631 + (TA)n Simple_repeat Simple_repeat 2 40 0 1313 202 102 76 chr4 3293031 3293054 -180995608 - Charlie2 DNA MER1_type -500 2362 2341 2012 161 0 0 chr4 3293054 3293364 -180995298 + AluJb SINE Alu 1 310 -2 1313 202 102 76 chr4 3293364 3293490 -180995172 - Charlie2 DNA MER1_type -521 2341 2169 2317 109 3 0 chr4 3293514 3293816 -180994846 - AluSg SINE Alu -7 303 1 2178 117 7 0 chr4 3294018 3294308 -180994354 - AluSq SINE Alu -21 292 1 1718 159 66 3 chr4 3295184 3295610 -180993052 - L1M4 LINE L1 -587 5597 5149 307 66 0 66 chr4 3295631 3295692 -180992970 + (TTTCC)n Simple_repeat Simple_repeat 1 57 0 14974 185 35 17 chr4 3295692 3297122 -180991540 - L1PB1 LINE L1 -85 6782 5379 2364 96 0 7 chr4 3297122 3297423 -180991239 - AluSg SINE Alu -11 299 1 14974 185 35 17 chr4 3297423 3298881 -180989781 - L1PB1 LINE L1 -1488 5379 3948 2337 94 7 3 chr4 3298881 3299188 -180989474 - AluSq SINE Alu -4 309 2 14974 185 35 17 chr4 3299188 3299421 -180989241 - L1PB1 LINE L1 -2919 3948 3721 2235 115 0 3 chr4 3299421 3299717 -180988945 - AluSc SINE Alu -14 295 1 14974 185 35 17 chr4 3299717 3300263 -180988399 - L1PB1 LINE L1 -3146 3721 3186 2270 114 0 0 chr4 3300263 3300562 -180988100 - AluSx SINE Alu 0 312 14 14974 185 35 17 chr4 3300562 3300872 -180987790 - L1PB1 LINE L1 -3681 3186 2883 194 0 39 0 chr4 3300872 3300898 -180987764 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 14974 185 35 17 chr4 3300898 3301713 -180986949 - L1PB1 LINE L1 -3984 2883 1876 2332 88 0 38 chr4 3301713 3302032 -180986630 - AluSc SINE Alu -2 307 1 14974 185 35 17 chr4 3302032 3302526 -180986136 - L1PB1 LINE L1 -4991 1876 1392 940 202 21 0 chr4 3302523 3302711 -180985951 - L1PB1 LINE L1 -6666 197 6 * 1159 175 62 22 chr4 3302728 3303002 -180985660 - L1M4 LINE L1 -1384 4762 4478 209 262 0 0 chr4 3305487 3305529 -180983133 + (TCCG)n Simple_repeat Simple_repeat 2 43 0 228 292 0 0 chr4 3305713 3305778 -180982884 + (CA)n Simple_repeat Simple_repeat 1 65 0 770 74 11 63 chr4 3311521 3311710 -180976952 + (TCTCTG)n Simple_repeat Simple_repeat 2 180 0 260 260 164 10 chr4 3312297 3312401 -180976261 + LTR37B LTR ERV1 197 316 -152 2304 51 34 3 chr4 3312516 3312759 -180975903 - AluSg SINE Alu -9 301 46 180 0 0 0 chr4 3312759 3312779 -180975883 + (C)n Simple_repeat Simple_repeat 1 20 0 2304 51 34 3 chr4 3312779 3312827 -180975835 - AluSg SINE Alu -264 46 1 287 204 0 84 chr4 3313169 3313311 -180975351 + (CCCCG)n Simple_repeat Simple_repeat 4 133 0 214 218 18 0 chr4 3317122 3317177 -180971485 + T-rich Low_complexity Low_complexity 5 60 0 326 253 91 0 chr4 3317630 3317729 -180970933 + MER91C DNA MER1_type 33 140 0 261 271 75 45 chr4 3317866 3317999 -180970663 - MIR SINE MIR -44 218 82 254 120 53 40 chr4 3318068 3318143 -180970519 + CT-rich Low_complexity Low_complexity 1 76 0 1465 201 45 17 chr4 3318144 3318433 -180970229 - AluJo SINE Alu -3 309 13 267 54 0 0 chr4 3318705 3318742 -180969920 + (TTA)n Simple_repeat Simple_repeat 2 38 0 1972 105 7 18 chr4 3318744 3319029 -180969633 - AluSx SINE Alu -30 282 1 306 373 67 34 chr4 3319650 3319918 -180968744 - L1MCa LINE L1 -4174 2252 1976 378 233 27 73 chr4 3319950 3320169 -180968493 - L1ME1 LINE L1 -262 5904 5696 528 116 67 37 chr4 3320172 3320292 -180968370 - L1M3 LINE L1 -626 5554 5429 659 261 28 138 chr4 3320312 3320422 -180968240 - L1M4 LINE L1 -3549 2597 2476 2226 95 0 0 chr4 3320422 3320716 -180967946 + AluSg SINE Alu 1 294 -16 659 261 28 138 chr4 3320716 3321005 -180967657 - L1M4 LINE L1 -3670 2476 2238 638 316 85 62 chr4 3321397 3321751 -180966911 - L1ME4a LINE L1 -239 5882 5521 978 217 99 15 chr4 3321756 3322088 -180966574 - HsTC2 DNA Tc2 -17 1881 1522 388 221 19 10 chr4 3322090 3322194 -180966468 - HsTC2 DNA Tc2 -1793 105 1 356 296 66 13 chr4 3322527 3322679 -180965983 - MER5A DNA MER1_type -1 188 29 237 232 274 0 chr4 3323085 3323180 -180965482 + L2 LINE L2 3193 3313 0 25 0 0 0 chr4 3323370 3323395 -180965267 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr4 3323413 3323435 -180965227 + AT_rich Low_complexity Low_complexity 1 22 0 3494 202 33 69 chr4 3323625 3323849 -180964813 - L1MB7 LINE L1 -61 6123 5892 2373 57 10 7 chr4 3323849 3324147 -180964515 - AluY SINE Alu -12 299 1 3494 202 33 69 chr4 3324147 3324197 -180964465 - L1MB7 LINE L1 -292 5892 5842 1965 106 7 0 chr4 3324197 3324472 -180964190 - AluSx SINE Alu -12 300 24 3494 202 33 69 chr4 3324472 3325159 -180963503 - L1MB7 LINE L1 -342 5842 5131 1584 133 0 4 chr4 3325159 3325392 -180963270 + AluJb SINE Alu 3 234 -78 3494 202 33 69 chr4 3325392 3326130 -180962532 - L1MB7 LINE L1 -1053 5131 4316 2264 91 3 3 chr4 3326137 3326446 -180962216 - AluSx SINE Alu -2 310 2 363 222 0 0 chr4 3326450 3326531 -180962131 - L1MB7 LINE L1 0 6184 6104 1961 229 50 12 chr4 3326654 3327169 -180961493 - L1MB3 LINE L1 -2 6181 5647 271 266 112 21 chr4 3327186 3327329 -180961333 + HAL1 LINE L1 538 693 -1814 284 222 25 25 chr4 3327900 3327981 -180960681 - L1MB3 LINE L1 -572 5590 5510 335 361 100 11 chr4 3327990 3328170 -180960492 + HAL1 LINE L1 822 1017 -1490 291 206 28 19 chr4 3328183 3328290 -180960372 + HAL1 LINE L1 1069 1176 -1331 637 275 117 43 chr4 3328633 3329048 -180959614 - MLT1D LTR MaLR 0 467 22 189 264 0 0 chr4 3331054 3331126 -180957536 + (CA)n Simple_repeat Simple_repeat 1 72 0 296 276 13 0 chr4 3335000 3335076 -180953586 + MER81 DNA DNA 2 78 -36 205 290 116 0 chr4 3335349 3335418 -180953244 - MIR SINE MIR -79 183 107 192 338 44 22 chr4 3337251 3337387 -180951275 - L3 LINE CR1 -103 1474 1336 * 291 269 47 32 chr4 3337380 3337541 -180951121 - MIR SINE MIR -12 250 89 2162 60 53 3 chr4 3340215 3340500 -180948162 + AluSc SINE Alu 1 299 -10 28 29 0 0 chr4 3341009 3341044 -180947618 + GC_rich Low_complexity Low_complexity 1 35 0 201 238 16 16 chr4 3341381 3341444 -180947218 + (CCCGG)n Simple_repeat Simple_repeat 3 65 0 48 72 0 0 chr4 3341564 3341661 -180947001 + GC_rich Low_complexity Low_complexity 1 97 0 34 42 0 0 chr4 3341749 3341797 -180946865 + GC_rich Low_complexity Low_complexity 1 48 0 204 184 41 0 chr4 3341926 3341975 -180946687 + C-rich Low_complexity Low_complexity 4 54 0 40 87 0 0 chr4 3342000 3342103 -180946559 + GC_rich Low_complexity Low_complexity 1 103 0 24 67 0 0 chr4 3342169 3342214 -180946448 + GC_rich Low_complexity Low_complexity 1 45 0 334 311 67 8 chr4 3343228 3343347 -180945315 - MIR SINE MIR -43 219 94 217 189 167 33 chr4 3345825 3345915 -180942747 - L2 LINE L2 -38 3234 3133 412 330 60 47 chr4 3348931 3349104 -180939558 - L1 LINE L1 -802 5344 5172 429 301 102 62 chr4 3349104 3349360 -180939302 - L1ME4a LINE L1 -1 6120 5127 335 299 11 0 chr4 3349364 3349451 -180939211 + L1ME4a LINE L1 5983 6070 -51 455 247 0 46 chr4 3553248 3553623 -180735039 + CT-rich Low_complexity Low_complexity 1 357 0 312 27 0 0 chr4 3554691 3554728 -180733934 + (CA)n Simple_repeat Simple_repeat 2 38 0 235 254 0 0 chr4 3555592 3555647 -180733015 + L2 LINE L2 3200 3254 -18 1823 191 91 7 chr4 3556196 3556625 -180732037 + L1MB3 LINE L1 5715 6179 -4 202 260 77 39 chr4 3557074 3557178 -180731484 - MER5A DNA MER1_type -75 114 7 542 325 86 53 chr4 3557631 3558274 -180730388 - L1MC4 LINE L1 -1 8041 7378 420 176 35 7 chr4 3558564 3558706 -180729956 + (TCTA)n Simple_repeat Simple_repeat 2 147 0 987 235 20 24 chr4 3558772 3559066 -180729596 - L1MC4 LINE L1 -978 7064 6772 252 0 0 0 chr4 3559239 3559267 -180729395 + (CA)n Simple_repeat Simple_repeat 2 29 0 433 333 165 2 chr4 3559876 3560276 -180728386 - L1MC4a LINE L1 -1492 6316 5852 * 740 244 14 14 chr4 3560267 3560480 -180728182 + L1MC/D LINE L1 5302 5514 -2294 371 302 74 18 chr4 3560513 3560900 -180727762 - L1MC4a LINE L1 -840 5306 4909 330 361 104 17 chr4 3561102 3561332 -180727330 - L1MC4a LINE L1 -1475 4671 4422 331 276 57 0 chr4 3561425 3561548 -180727114 + LTR33 LTR ERVL 84 213 -308 493 270 23 23 chr4 3562242 3562416 -180726246 + MLT1K LTR MaLR 394 567 -21 353 321 18 0 chr4 3562798 3562907 -180725755 - MIR SINE MIR -71 191 81 343 151 82 0 chr4 3563251 3563324 -180725338 + MLT1H LTR MaLR 471 549 0 1040 276 32 34 chr4 3563697 3564077 -180724585 + MLT1E2 LTR MaLR 1 379 -247 402 57 0 0 chr4 3564126 3564179 -180724483 + (TG)n Simple_repeat Simple_repeat 1 53 0 977 220 73 32 chr4 3564180 3564493 -180724169 - MLT2D LTR ERVL -84 330 5 614 302 22 0 chr4 3564494 3564719 -180723943 + MLT1E2 LTR MaLR 380 609 -17 181 292 167 8 chr4 3565262 3565382 -180723280 - MIR3 SINE MIR -58 150 12 2116 202 42 13 chr4 3566602 3567053 -180721609 - MLT1C LTR MaLR -2 465 2 2301 68 0 7 chr4 3567330 3567661 -180721001 + AluY SINE Alu 1 329 0 190 381 38 19 chr4 3567981 3568141 -180720521 + L2 LINE L2 2588 2750 -564 771 341 156 21 chr4 3568795 3569270 -180719392 + HAL1 LINE L1 959 1497 -1010 1196 88 13 0 chr4 3569270 3569429 -180719233 - AluSc SINE Alu -19 290 130 705 295 129 3 chr4 3569440 3569772 -180718890 + HAL1 LINE L1 1506 1879 -628 1643 118 141 0 chr4 3570004 3570267 -180718395 + AluJo SINE Alu 1 300 -12 239 246 16 0 chr4 3570570 3570631 -180718031 + L2 LINE L2 3182 3243 -70 653 288 40 0 chr4 3573115 3573313 -180715349 - MIR SINE MIR -56 206 1 1055 80 0 0 chr4 3574722 3574860 -180713802 - MER85 DNA T2_type -1 138 1 391 99 25 86 chr4 3575297 3575378 -180713284 - L1MC1 LINE L1 -18 6315 6240 389 188 16 83 chr4 3575395 3575587 -180713075 + C-rich Low_complexity Low_complexity 2 180 0 252 153 38 99 chr4 3575607 3575738 -180712924 + C-rich Low_complexity Low_complexity 4 126 0 2556 27 0 0 chr4 3578274 3578571 -180710091 + AluY SINE Alu 1 297 -14 834 164 0 16 chr4 3579570 3579753 -180708909 + CT-rich Low_complexity Low_complexity 1 180 0 * 864 141 0 27 chr4 3579747 3579932 -180708730 + (TCCC)n Simple_repeat Simple_repeat 1 180 0 772 151 0 27 chr4 3579947 3580132 -180708530 + CT-rich Low_complexity Low_complexity 1 180 0 456 294 47 41 chr4 3580350 3580520 -180708142 + MIR SINE MIR 2 172 -90 192 354 18 26 chr4 3580988 3581101 -180707561 + MIR SINE MIR 27 138 -124 280 338 66 15 chr4 3581632 3581768 -180706894 - MIR SINE MIR -13 249 107 186 222 0 0 chr4 3582656 3582710 -180705952 + CT-rich Low_complexity Low_complexity 4 57 0 263 223 62 108 chr4 3583111 3583241 -180705421 + MLT1H LTR MaLR 421 532 -17 374 236 39 34 chr4 3583732 3583910 -180704752 + (CCCA)n Simple_repeat Simple_repeat 1 179 0 293 347 48 8 chr4 3584183 3584307 -180704355 - MER5A DNA MER1_type 0 189 61 254 408 25 0 chr4 3586554 3586750 -180701912 - L1MC/D LINE L1 -1911 5897 5697 525 293 118 84 chr4 3586893 3588529 -180700133 + HAL1 LINE L1 816 2507 0 378 301 55 7 chr4 3588891 3589037 -180699625 + L2 LINE L2 2925 3077 -195 430 257 133 9 chr4 3589679 3589956 -180698706 - MLT1C LTR MaLR -44 346 47 275 152 0 15 chr4 3591211 3591277 -180697385 + (CA)n Simple_repeat Simple_repeat 1 65 0 709 153 9 18 chr4 3591292 3591620 -180697042 + (CA)n Simple_repeat Simple_repeat 1 324 0 602 172 0 32 chr4 3591643 3591829 -180696833 + (CA)n Simple_repeat Simple_repeat 1 180 0 541 178 11 17 chr4 3591845 3592025 -180696637 + (CA)n Simple_repeat Simple_repeat 1 179 0 1616 226 106 47 chr4 3592314 3592804 -180695858 + MLT2B1 LTR ERVL 2 520 0 354 301 0 35 chr4 3592959 3593072 -180695590 - MIR SINE MIR -141 121 13 1143 265 60 34 chr4 3593332 3593717 -180694945 - MLT2C1 LTR ERVL 0 397 3 233 343 86 14 chr4 3593717 3593848 -180694814 + MIR3 SINE MIR 7 150 -58 324 292 26 39 chr4 3594553 3594707 -180693955 - L2 LINE L2 0 3272 3121 298 309 0 19 chr4 3595899 3596017 -180692645 - MIR SINE MIR -87 121 33 212 235 59 0 chr4 3596628 3596696 -180691966 + L2 LINE L2 3197 3268 -4 180 217 0 0 chr4 3597094 3597140 -180691522 + (TGGG)n Simple_repeat Simple_repeat 4 49 0 243 0 0 0 chr4 3597192 3597219 -180691443 + (TGGA)n Simple_repeat Simple_repeat 1 27 0 197 200 0 0 chr4 3598962 3599002 -180689660 - MIR SINE MIR -62 146 107 210 342 141 38 chr4 3600153 3600472 -180688190 - L2 LINE L2 -29 3284 2933 264 233 155 39 chr4 3600686 3600789 -180687873 - L2 LINE L2 -2521 793 679 243 302 123 12 chr4 3601333 3601516 -180687146 + MIR SINE MIR 13 207 -38 381 302 71 28 chr4 3601524 3601706 -180686956 - MIR SINE MIR -3 259 70 442 223 10 10 chr4 3601982 3602085 -180686577 + MER81 DNA DNA 12 114 0 467 307 67 21 chr4 3602953 3603191 -180685471 - L1MC2 LINE L1 -9 6335 6087 281 276 66 4 chr4 3603709 3603812 -180684850 - MIR SINE MIR -60 148 43 225 208 0 31 chr4 3605541 3605637 -180683025 + (CAATT)n Simple_repeat Simple_repeat 2 94 0 202 310 17 0 chr4 3605735 3605793 -180682869 + (CCCG)n Simple_repeat Simple_repeat 1 59 0 516 161 12 43 chr4 3605855 3606017 -180682645 + C-rich Low_complexity Low_complexity 5 161 0 180 0 0 0 chr4 3606054 3606074 -180682588 + (CAG)n Simple_repeat Simple_repeat 1 20 0 273 307 50 28 chr4 3606914 3607093 -180681569 - L1ME4a LINE L1 -1 6120 5938 893 233 76 76 chr4 3607276 3607723 -180680939 + MLT1C LTR MaLR 3 449 -18 1716 184 0 28 chr4 3607948 3608268 -180680394 - AluJb SINE Alu -1 311 1 258 267 120 0 chr4 3608272 3608347 -180680315 - MIR SINE MIR -18 244 161 724 332 47 32 chr4 3608489 3608932 -180679730 + L2 LINE L2 713 1162 -2152 420 305 35 6 chr4 3608936 3609110 -180679552 + L1ME2 LINE L1 3257 3435 -2711 * 3550 179 159 90 chr4 3609108 3609780 -180678882 + L1MC3 LINE L1 6398 7022 -763 229 322 23 0 chr4 3609780 3609867 -180678795 + MLT1F1 LTR MaLR 37 125 -442 3550 179 159 90 chr4 3609867 3610403 -180678259 + L1MC3 LINE L1 7022 7782 -3 * 3843 255 113 40 chr4 3610384 3612434 -180676228 + L1ME2 LINE L1 3443 5722 -442 2162 136 146 11 chr4 3612434 3612810 -180675852 + MSTA LTR MaLR 2 428 0 3843 255 113 40 chr4 3612810 3613287 -180675375 + L1ME2 LINE L1 5722 6163 -1 470 294 76 34 chr4 3613327 3613565 -180675097 + L2 LINE L2 3066 3313 0 353 343 62 21 chr4 3613568 3614037 -180674625 + L1MC/D LINE L1 4691 5178 -968 287 288 47 26 chr4 3614157 3614528 -180674134 + L1MC/D LINE L1 5177 5563 -601 388 344 60 14 chr4 3615363 3615581 -180673081 + MIR SINE MIR 13 240 -22 212 320 102 15 chr4 3616078 3616284 -180672378 + L2 LINE L2 2454 2677 -637 971 247 160 9 chr4 3616796 3617140 -180671522 - MSTD LTR MaLR 0 396 1 355 273 93 19 chr4 3618112 3618273 -180670389 + Charlie8 DNA MER1_type 50 222 -2195 2484 68 0 3 chr4 3618829 3619140 -180669522 - AluY SINE Alu -1 310 1 21 36 0 0 chr4 3619437 3619465 -180669197 + AT_rich Low_complexity Low_complexity 1 28 0 211 279 49 0 chr4 3619469 3619530 -180669132 + L2 LINE L2 3250 3313 0 267 316 54 57 chr4 3619587 3619919 -180668743 - L1 LINE L1 -2294 3852 3522 363 228 0 0 chr4 3620186 3620278 -180668384 + (TG)n Simple_repeat Simple_repeat 1 92 0 361 385 23 8 chr4 3621080 3621337 -180667325 + HERVL LTR ERVL 4346 4606 -1048 318 291 146 25 chr4 3623149 3623307 -180665355 - MIR SINE MIR -78 184 8 1334 209 40 62 chr4 3623474 3623960 -180664702 - MER51A LTR ERV1 0 634 1 2214 92 0 31 chr4 3624010 3624327 -180664335 - AluY SINE Alu -4 307 1 586 263 97 64 chr4 3624741 3625114 -180663548 - MLT1D LTR MaLR -115 390 6 254 191 0 0 chr4 3625172 3625219 -180663443 + L1MC3 LINE L1 7103 7149 -636 492 294 37 0 chr4 3625339 3625526 -180663136 + L1MC3 LINE L1 7583 7776 -9 1874 131 19 44 chr4 3625542 3625862 -180662800 + AluSx SINE Alu 1 312 0 243 243 0 34 chr4 3627400 3627577 -180661085 + CT-rich Low_complexity Low_complexity 4 174 0 303 186 70 23 chr4 3627581 3627710 -180660952 + (CTCA)n Simple_repeat Simple_repeat 2 136 0 * 308 306 6 44 chr4 3627631 3627814 -180660848 + C-rich Low_complexity Low_complexity 1 176 0 * 473 261 0 43 chr4 3627739 3627923 -180660739 + CT-rich Low_complexity Low_complexity 4 179 0 203 240 0 38 chr4 3627946 3628129 -180660533 + CT-rich Low_complexity Low_complexity 4 179 0 192 380 50 0 chr4 3629648 3629748 -180658914 - MIR SINE MIR -79 183 79 201 293 0 0 chr4 3630103 3630178 -180658484 + CT-rich Low_complexity Low_complexity 1 75 0 1018 126 6 16 chr4 3631051 3631091 -180657571 + (GGGA)n Simple_repeat Simple_repeat 1 219 0 1018 126 6 16 chr4 3631091 3631273 -180657389 + (GGGA)n Simple_repeat Simple_repeat 1 180 0 401 318 28 5 chr4 3631861 3632072 -180656590 + L1MC4 LINE L1 6798 7013 -1029 23 0 0 0 chr4 3632584 3632607 -180656055 + AT_rich Low_complexity Low_complexity 1 23 0 1355 179 50 22 chr4 3632990 3633011 -180655651 + MLT1A2 LTR MaLR 48 67 -307 2906 85 0 8 chr4 3633011 3633389 -180655273 - THE1C LTR MaLR 0 375 1 1355 179 50 22 chr4 3633389 3633685 -180654977 + MLT1A2 LTR MaLR 67 374 0 241 241 17 0 chr4 3633936 3633994 -180654668 + GA-rich Low_complexity Low_complexity 2 60 0 698 299 40 26 chr4 3634651 3634999 -180653663 + L1M4 LINE L1 4553 4905 -1241 189 273 0 0 chr4 3635791 3635835 -180652827 + MIR SINE MIR 216 259 -3 233 384 13 25 chr4 3637430 3637589 -180651073 - L2 LINE L2 -434 2880 2724 856 79 28 17 chr4 3638178 3638355 -180650307 + (TG)n Simple_repeat Simple_repeat 2 180 0 218 214 0 36 chr4 3638438 3638494 -180650168 + CT-rich Low_complexity Low_complexity 2 55 0 223 120 20 20 chr4 3638542 3638592 -180650070 + CT-rich Low_complexity Low_complexity 4 53 0 1184 288 77 23 chr4 3638647 3639130 -180649532 - MLT1H LTR MaLR -4 545 37 945 224 13 47 chr4 3639661 3639893 -180648769 + MER58A DNA MER1_type 1 224 0 257 329 125 54 chr4 3640138 3640433 -180648229 + L2 LINE L2 2957 3272 0 183 80 0 0 chr4 3640436 3640461 -180648201 + (GGAA)n Simple_repeat Simple_repeat 2 26 0 1026 155 3 8 chr4 3640477 3640852 -180647810 + (TGGA)n Simple_repeat Simple_repeat 1 372 0 384 271 16 8 chr4 3641638 3641760 -180646902 - MER45A DNA AcHobo -19 159 37 576 125 0 61 chr4 3642671 3643199 -180645463 + (CA)n Simple_repeat Simple_repeat 1 495 0 707 35 40 52 chr4 3645322 3645496 -180643166 + (CA)n Simple_repeat Simple_repeat 1 172 0 434 271 87 5 chr4 3645496 3645714 -180642948 - MER89 LTR ERV1 -323 236 1 743 225 12 0 chr4 3647001 3647170 -180641492 + MER41D LTR ERV1 387 557 0 427 256 51 70 chr4 3648745 3648901 -180639761 + MIR SINE MIR 108 260 -2 203 163 0 61 chr4 3648918 3648967 -180639695 + GA-rich Low_complexity Low_complexity 6 51 0 1210 217 127 42 chr4 3649768 3650178 -180638484 - LTR56 LTR ERV1 0 445 1 498 221 31 0 chr4 3650236 3650363 -180638299 + MER57A LTR ERV1 1 131 -272 474 269 83 0 chr4 3650372 3650528 -180638134 + MER57A LTR ERV1 235 403 0 235 250 18 0 chr4 3652203 3652259 -180636403 + MIR3 SINE MIR 109 165 -43 218 331 230 25 chr4 3652699 3653095 -180635567 - L2 LINE L2 -540 2774 2298 233 305 191 0 chr4 3653239 3653344 -180635318 - MIR SINE MIR -62 146 22 459 233 0 0 chr4 3653361 3653490 -180635172 + (CA)n Simple_repeat Simple_repeat 1 129 0 202 258 21 0 chr4 3654808 3654872 -180633790 - MIR SINE MIR -104 158 94 291 344 40 8 chr4 3655277 3655402 -180633260 + L3 LINE CR1 1359 1487 -90 1328 226 72 0 chr4 3655426 3655785 -180632877 + L1MB3 LINE L1 5776 6160 -23 206 316 153 45 chr4 3655832 3656145 -180632517 - L2 LINE L2 -75 3197 2851 277 165 37 28 chr4 3656315 3656394 -180632268 - MIR SINE MIR -78 184 106 338 361 38 13 chr4 3657968 3658126 -180630536 + HAL1b LINE L1 514 675 -673 1184 204 91 14 chr4 3658892 3659229 -180629433 - MLT1A1 LTR MaLR 0 365 43 312 208 78 0 chr4 3659449 3659526 -180629136 - MLT1A1 LTR MaLR -291 83 1 456 332 80 9 chr4 3659645 3659970 -180628692 + LTR16A1 LTR ERVL 59 406 -51 213 325 26 0 chr4 3661151 3661265 -180627397 + (CTCA)n Simple_repeat Simple_repeat 2 118 0 571 250 61 80 chr4 3661989 3662365 -180626297 - MLT1B LTR MaLR -15 375 7 361 292 72 41 chr4 3662652 3662847 -180625815 + MIR SINE MIR 60 260 -2 420 278 75 79 chr4 3664226 3664453 -180624209 + HAL1 LINE L1 1093 1318 -1189 284 221 0 13 chr4 3664624 3664701 -180623961 - L1M4 LINE L1 -1162 4984 4909 330 361 104 17 chr4 3664903 3665133 -180623529 - L1M4 LINE L1 -1475 4671 4422 331 276 57 0 chr4 3665226 3665349 -180623313 + LTR33 LTR ERVL 84 213 -308 493 270 23 23 chr4 3666043 3666217 -180622445 + MLT1K LTR MaLR 394 567 -21 353 321 18 0 chr4 3666599 3666708 -180621954 - MIR SINE MIR -71 191 81 343 151 82 0 chr4 3667052 3667125 -180621537 + MLT1H LTR MaLR 471 549 0 1100 266 32 34 chr4 3667498 3667878 -180620784 + MLT1E2 LTR MaLR 1 379 -247 420 55 0 0 chr4 3667927 3667982 -180620680 + (TG)n Simple_repeat Simple_repeat 1 55 0 1028 218 50 34 chr4 3667983 3668304 -180620358 - MLT2D LTR ERVL -84 330 5 614 302 22 0 chr4 3668305 3668530 -180620132 + MLT1E2 LTR MaLR 380 609 -17 1053 139 0 11 chr4 3768800 3769338 -180519324 + (CATTC)n Satellite Satellite 1 532 0 1086 124 0 5 chr4 3769349 3769783 -180518879 + (CATTC)n Satellite Satellite 1 431 0 1110 127 0 0 chr4 3769827 3770187 -180518475 + (CATTC)n Satellite Satellite 1 360 0 306 147 0 0 chr4 3770210 3770278 -180518384 + (CATTC)n Satellite Satellite 2 69 0 1093 129 2 27 chr4 3770419 3770962 -180517700 + (CATTC)n Satellite Satellite 1 529 0 945 131 0 16 chr4 3770992 3771356 -180517306 + (CATTC)n Satellite Satellite 1 359 0 1110 100 0 0 chr4 3771397 3771577 -180517085 + (CATTC)n Satellite Satellite 1 180 0 514 164 0 51 chr4 3771593 3771770 -180516892 + (CATTC)n Satellite Satellite 2 169 0 1026 135 0 17 chr4 3771892 3772536 -180516126 + (CATTC)n Satellite Satellite 1 633 0 390 159 0 0 chr4 3772552 3772640 -180516022 + (CATTC)n Satellite Satellite 2 89 0 1311 94 0 7 chr4 3772652 3773201 -180515461 + (CATTC)n Satellite Satellite 1 544 0 360 111 0 0 chr4 3773222 3773285 -180515377 + (CATTC)n Satellite Satellite 2 64 0 876 149 0 0 chr4 3773296 3773470 -180515192 + (CATTC)n Satellite Satellite 1 174 0 787 136 6 6 chr4 3773482 3773658 -180515004 + (CATTC)n Satellite Satellite 2 177 0 282 29 0 0 chr4 3773686 3773721 -180514941 + (CATTC)n Satellite Satellite 2 36 0 938 117 0 6 chr4 3773736 3773907 -180514755 + (CATTC)n Satellite Satellite 2 171 0 1081 105 4 4 chr4 3773922 3774175 -180514487 + (CATTC)n Satellite Satellite 1 253 0 882 131 0 0 chr4 3774187 3774355 -180514307 + (CATTC)n Satellite Satellite 2 169 0 320 43 22 0 chr4 3774367 3774413 -180514249 + (CATTC)n Satellite Satellite 2 48 0 855 111 0 36 chr4 3774519 3774799 -180513863 + (GAATG)n Satellite Satellite 1 269 0 270 132 0 0 chr4 3774810 3774863 -180513799 + (GAATG)n Satellite Satellite 2 54 0 1062 99 0 0 chr4 3774875 3775046 -180513616 + (GAATG)n Satellite Satellite 4 174 0 929 128 0 23 chr4 3775077 3775688 -180512974 + (GAATG)n Satellite Satellite 1 773 0 881 124 0 27 chr4 3775704 3775889 -180512773 + (GAATG)n Satellite Satellite 1 180 0 951 110 0 0 chr4 3775908 3776113 -180512549 + (GAATG)n Satellite Satellite 1 205 0 618 189 0 0 chr4 3776128 3776303 -180512359 + (GAATG)n Satellite Satellite 2 176 0 1026 122 0 0 chr4 3776324 3776504 -180512158 + (GAATG)n Satellite Satellite 1 180 0 954 121 0 0 chr4 3776515 3776723 -180511939 + (GAATG)n Satellite Satellite 1 208 0 1047 112 0 0 chr4 3776739 3776918 -180511744 + (GAATG)n Satellite Satellite 2 180 0 268 169 12 12 chr4 3776930 3777013 -180511649 + (GAATG)n Satellite Satellite 2 84 0 991 106 6 6 chr4 3777024 3777203 -180511459 + (GAATG)n Satellite Satellite 2 180 0 1122 100 0 0 chr4 3777214 3777394 -180511268 + (GAATG)n Satellite Satellite 1 180 0 939 153 0 0 chr4 3777438 3777801 -180510861 + (GAATG)n Satellite Satellite 1 363 0 969 146 0 2 chr4 3777817 3778136 -180510526 + (GAATG)n Satellite Satellite 1 498 0 858 107 0 0 chr4 3778151 3778301 -180510361 + (GAATG)n Satellite Satellite 2 151 0 1140 101 0 0 chr4 3778312 3778490 -180510172 + (GAATG)n Satellite Satellite 3 180 0 261 155 0 0 chr4 3778506 3778564 -180510098 + (GAATG)n Satellite Satellite 4 61 0 1014 122 0 14 chr4 3778581 3778942 -180509720 + (GAATG)n Satellite Satellite 1 356 0 1014 155 0 0 chr4 3778957 3779376 -180509286 + (GAATG)n Satellite Satellite 1 419 0 1132 80 5 8 chr4 3779387 3779596 -180509066 + (GAATG)n Satellite Satellite 1 388 0 1191 81 0 0 chr4 3779607 3779780 -180508882 + (GAATG)n Satellite Satellite 2 174 0 383 170 10 0 chr4 3779793 3779893 -180508769 + (GAATG)n Satellite Satellite 2 102 0 1035 136 1 4 chr4 3780023 3780537 -180508125 + (GAATG)n Satellite Satellite 2 680 0 1068 106 0 0 chr4 3780554 3780733 -180507929 + (GAATG)n Satellite Satellite 1 179 0 1122 100 0 0 chr4 3780748 3780928 -180507734 + (GAATG)n Satellite Satellite 1 180 0 1104 120 0 6 chr4 3780972 3781332 -180507330 + (GAATG)n Satellite Satellite 1 536 0 1044 107 0 2 chr4 3781351 3781581 -180507081 + (GAATG)n Satellite Satellite 1 409 0 781 129 6 6 chr4 3781593 3781756 -180506906 + (GAATG)n Satellite Satellite 2 164 0 1092 112 0 17 chr4 3781768 3782211 -180506451 + (GAATG)n Satellite Satellite 1 612 0 1101 98 0 0 chr4 3782223 3782616 -180506046 + (GAATG)n Satellite Satellite 1 393 0 781 129 6 6 chr4 3782628 3782791 -180505871 + (GAATG)n Satellite Satellite 2 164 0 927 139 0 0 chr4 3782807 3782987 -180505675 + (GAATG)n Satellite Satellite 1 180 0 1068 115 0 0 chr4 3782998 3783262 -180505400 + (GAATG)n Satellite Satellite 1 264 0 331 310 18 0 chr4 3885059 3885172 -180403490 - L1MC4 LINE L1 -7 8035 7921 1906 208 50 2 chr4 3885316 3885797 -180402865 - L1 LINE L1 -2178 3968 3465 721 128 29 87 chr4 3885797 3885969 -180402693 - MSTC LTR MaLR -242 186 25 454 266 74 87 chr4 3887113 3887342 -180401320 + HAL1 LINE L1 1093 1318 -1189 1979 160 0 0 chr4 3887542 3887854 -180400808 - AluJb SINE Alu 0 312 1 1032 191 14 0 chr4 3887855 3888065 -180400597 + Tigger2 DNA MER2_type 2481 2693 -25 441 306 38 25 chr4 3889261 3889418 -180399244 + MIR SINE MIR 38 196 -66 4094 269 50 10 chr4 3889657 3891176 -180397486 - L1MEc LINE L1 -2515 3700 2167 317 284 88 10 chr4 3891248 3891442 -180397220 - L1MEc LINE L1 -6153 243 35 321 288 174 29 chr4 3891517 3891798 -180396864 + L2 LINE L2 2949 3270 -2 244 350 49 0 chr4 3891918 3892041 -180396621 + MIR SINE MIR 2 130 -132 323 324 99 38 chr4 3892157 3892419 -180396243 - L2 LINE L2 -35 3278 3001 1460 165 14 25 chr4 3892571 3892856 -180395806 + MER21B LTR ERV1 1 282 -581 374 113 0 70 chr4 3892855 3892926 -180395736 + MER21B LTR ERV1 217 282 -581 * 366 159 0 0 chr4 3892933 3892996 -180395666 + MER21B LTR ERV1 220 282 -581 2026 196 70 0 chr4 3893003 3893447 -180395215 + MER21B LTR ERV1 220 694 -169 332 182 39 0 chr4 3893444 3893521 -180395141 + MER21B LTR ERV1 615 694 -169 * 579 244 72 16 chr4 3893518 3893711 -180394951 + MER21B LTR ERV1 615 818 -45 521 118 0 21 chr4 3895784 3895877 -180392785 + (GGGA)n Simple_repeat Simple_repeat 2 92 0 981 248 100 12 chr4 3896121 3896541 -180392121 - MLT1C LTR MaLR -10 457 1 191 250 0 54 chr4 3898498 3898554 -180390108 - L2 LINE L2 -228 3044 2992 183 208 19 57 chr4 3899378 3899431 -180389231 + MIR3 SINE MIR 112 162 -46 248 290 30 40 chr4 3899576 3899676 -180388986 + MIR SINE MIR 108 206 -56 2217 219 50 9 chr4 3899805 3900384 -180388278 - LTR26 LTR ERV1 0 603 1 245 292 18 48 chr4 3901537 3901705 -180386957 + (CCCA)n Simple_repeat Simple_repeat 2 164 0 395 302 11 22 chr4 3901927 3902106 -180386556 + (TCCA)n Simple_repeat Simple_repeat 2 178 0 598 298 174 11 chr4 3902190 3902546 -180386116 - L2 LINE L2 0 3313 2900 283 402 16 16 chr4 3903139 3903323 -180385339 + MIR SINE MIR 23 206 -56 238 300 0 63 chr4 3904509 3904699 -180383963 + CT-rich Low_complexity Low_complexity 3 180 0 * 295 262 0 78 chr4 3904559 3904750 -180383912 + C-rich Low_complexity Low_complexity 2 177 0 28 0 0 0 chr4 3905629 3905657 -180383005 + AT_rich Low_complexity Low_complexity 1 28 0 422 286 86 0 chr4 3906033 3906173 -180382489 - MIR SINE MIR -106 156 5 372 297 182 0 chr4 3906174 3906339 -180382323 - MIR SINE MIR -3 259 65 1087 276 100 22 chr4 3906453 3906816 -180381846 + L1ME LINE L1 4755 5088 -1078 1585 168 0 11 chr4 3906816 3907102 -180381560 + AluJb SINE Alu 30 312 0 1087 276 100 22 chr4 3907102 3907485 -180381177 + L1ME LINE L1 5088 5578 -588 647 151 0 92 chr4 3907485 3907592 -180381070 - MLT1C LTR MaLR -329 138 47 1448 147 140 29 chr4 3907592 3907864 -180380798 - AluJo SINE Alu 0 302 1 647 151 0 92 chr4 3907864 3907908 -180380754 - MLT1C LTR MaLR -420 47 1 3921 101 45 62 chr4 3908286 3908931 -180379731 + MER51A LTR ERV1 1 634 0 924 236 13 81 chr4 3909008 3909317 -180379345 + MLT1A2 LTR MaLR 4 291 -83 455 267 9 0 chr4 3909321 3909437 -180379225 + MLT1A2 LTR MaLR 258 374 0 303 359 109 41 chr4 3909710 3910156 -180378506 + HAL1b LINE L1 3 438 -893 2703 118 3 0 chr4 3910156 3910530 -180378132 + THE1C LTR MaLR 1 375 0 1576 187 13 13 chr4 3911093 3911403 -180377259 - LOR1a LTR ERV1 0 497 188 603 156 15 46 chr4 3911405 3911754 -180376908 + GA-rich Low_complexity Low_complexity 1 337 0 643 115 0 73 chr4 3911766 3911958 -180376704 + (GGGA)n Simple_repeat Simple_repeat 2 179 0 404 166 14 48 chr4 3911960 3912105 -180376557 + GA-rich Low_complexity Low_complexity 4 143 0 502 266 62 49 chr4 3912160 3912386 -180376276 + L1M4 LINE L1 2177 2405 -3741 1495 217 48 0 chr4 3913255 3913592 -180375070 + MLT1B LTR MaLR 7 359 -31 2209 131 39 25 chr4 3913820 3914178 -180374484 + THE1B LTR MaLR 2 364 0 379 313 142 4 chr4 3914586 3914819 -180373843 - MLT1H LTR MaLR -284 265 1 495 108 21 59 chr4 3915189 3915375 -180373287 + (TG)n Simple_repeat Simple_repeat 2 180 0 202 143 26 65 chr4 3915397 3915551 -180373111 + (TG)n Simple_repeat Simple_repeat 2 149 0 377 183 30 55 chr4 3915574 3915738 -180372924 + (TG)n Simple_repeat Simple_repeat 1 160 0 417 144 45 61 chr4 3915750 3916188 -180372474 + (TG)n Simple_repeat Simple_repeat 1 430 0 253 116 87 0 chr4 3917768 3917837 -180370825 + (CA)n Simple_repeat Simple_repeat 2 76 0 874 138 44 3 chr4 3917941 3918291 -180370371 + (TGGA)n Simple_repeat Simple_repeat 1 364 0 853 100 47 0 chr4 3918308 3918478 -180370184 + (TGGA)n Simple_repeat Simple_repeat 3 180 0 843 94 53 0 chr4 3918515 3918686 -180369976 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 724 144 28 31 chr4 3918702 3919059 -180369603 + (TGGA)n Simple_repeat Simple_repeat 1 355 0 681 142 35 0 chr4 3919109 3919278 -180369384 + (TGGA)n Simple_repeat Simple_repeat 4 178 0 329 313 12 6 chr4 3919640 3919803 -180368859 + (TG)n Simple_repeat Simple_repeat 1 164 0 608 253 57 26 chr4 3919869 3920063 -180368599 + MER63A DNA MER1_type 1 200 -10 258 305 76 29 chr4 3920516 3920621 -180368041 - L2 LINE L2 -4 3268 3159 240 263 113 42 chr4 3921513 3921726 -180366936 - L2 LINE L2 -248 3065 2838 374 285 108 37 chr4 3921836 3922050 -180366612 - MIR SINE MIR -24 238 10 1167 140 0 7 chr4 3922262 3922591 -180366071 + (CTCA)n Simple_repeat Simple_repeat 1 502 0 1056 141 0 0 chr4 3922591 3922768 -180365894 + (CTCA)n Simple_repeat Simple_repeat 3 179 0 513 121 0 0 chr4 3922815 3922898 -180365764 + (CTCA)n Simple_repeat Simple_repeat 1 83 0 402 74 0 0 chr4 3924698 3924752 -180363910 + (TGAA)n Simple_repeat Simple_repeat 4 57 0 241 287 130 0 chr4 3924976 3925084 -180363578 + MIR SINE MIR 80 201 -61 290 151 0 129 chr4 3925403 3925496 -180363166 + L2 LINE L2 3003 3083 -189 295 263 150 0 chr4 3927345 3927478 -180361184 + L2 LINE L2 2651 2803 -511 2117 102 0 0 chr4 3928140 3928424 -180360238 + AluSx SINE Alu 9 292 -20 499 282 0 39 chr4 3929116 3929297 -180359365 + (CA)n Simple_repeat Simple_repeat 1 174 0 198 319 0 0 chr4 3929315 3929459 -180359203 + (CA)n Simple_repeat Simple_repeat 1 144 0 508 341 0 9 chr4 3929481 3929980 -180358682 + (CA)n Simple_repeat Simple_repeat 1 494 0 547 350 0 0 chr4 3930007 3930370 -180358292 + (CA)n Simple_repeat Simple_repeat 1 363 0 398 388 0 0 chr4 3930402 3930580 -180358082 + (CA)n Simple_repeat Simple_repeat 1 178 0 569 256 8 0 chr4 3931050 3931183 -180357479 + MLT1C LTR MaLR 320 453 -14 499 245 71 0 chr4 3931907 3932062 -180356600 - MER92B LTR ERV1 -397 239 74 406 306 52 8 chr4 3932117 3932228 -180356434 + L1MC4a LINE L1 4920 5039 -1107 797 113 38 38 chr4 3932228 3932361 -180356301 + FLAM_C SINE Alu 1 133 0 406 306 52 8 chr4 3932361 3932383 -180356279 + L1MC4a LINE L1 5039 5059 -1087 549 346 67 38 chr4 3932625 3933278 -180355384 + L1MC4a LINE L1 5254 5925 -1883 625 321 130 21 chr4 3933298 3933774 -180354888 + L1MEc LINE L1 38 565 -5831 878 264 43 58 chr4 3933936 3933968 -180354694 + L1MEc LINE L1 730 761 -5444 342 0 0 0 chr4 3933968 3934006 -180354656 + (TAAA)n Simple_repeat Simple_repeat 1 38 0 878 264 43 58 chr4 3934006 3934557 -180354105 + L1MEc LINE L1 761 1191 -5014 2195 109 0 0 chr4 3934557 3934851 -180353811 + AluSx SINE Alu 2 295 -17 878 264 43 58 chr4 3934851 3934865 -180353797 + L1MEc LINE L1 1191 1204 -5001 824 139 16 4 chr4 3934911 3935429 -180353233 + (CA)n Simple_repeat Simple_repeat 1 524 0 468 319 47 0 chr4 3935429 3935664 -180352998 + L1MEc LINE L1 1396 1641 -4755 580 295 52 41 chr4 3935691 3936057 -180352605 + L1MCc LINE L1 51 420 -6003 1023 257 70 43 chr4 3936335 3937101 -180351561 + L1MCc LINE L1 1729 2473 -4649 2275 86 0 0 chr4 3937101 3937392 -180351270 + AluY SINE Alu 1 291 -20 684 67 0 0 chr4 3937399 3937489 -180351173 + (TA)n Simple_repeat Simple_repeat 1 90 0 1023 257 70 43 chr4 3937489 3937635 -180351027 + L1MCc LINE L1 2478 2925 -4197 352 316 95 38 chr4 3937713 3938329 -180350333 + L1MC4 LINE L1 7315 8042 0 236 275 72 0 chr4 3938561 3938630 -180350032 + MLT1K LTR MaLR 169 242 -346 227 339 148 16 chr4 3938687 3938876 -180349786 + MLT1K LTR MaLR 375 588 0 619 254 19 17 chr4 3939100 3939315 -180349347 + L1ME LINE L1 5392 5593 -577 207 218 0 0 chr4 3939324 3939379 -180349283 + (TG)n Simple_repeat Simple_repeat 2 56 0 1627 177 5 124 chr4 3939390 3939785 -180348877 + Tigger3(Golem) DNA MER2_type 1 3028 -1 329 295 0 71 chr4 3939956 3940068 -180348594 + L1MCc LINE L1 2856 2959 -3982 392 127 0 13 chr4 3940100 3940179 -180348483 + (TG)n Simple_repeat Simple_repeat 1 78 0 1901 117 0 0 chr4 3942977 3943243 -180345419 + AluSx SINE Alu 30 295 -17 396 340 49 21 chr4 3943292 3943600 -180345062 + L1ME3A LINE L1 987 1274 -4931 255 299 73 15 chr4 3943616 3943753 -180344909 + L1ME3A LINE L1 4294 4438 -1777 1989 141 3 3 chr4 3943779 3944084 -180344578 + AluSx SINE Alu 1 305 -7 1575 226 52 39 chr4 3944087 3944222 -180344440 - MLT2D LTR ERVL 0 464 332 2277 77 0 0 chr4 3944222 3944507 -180344155 - AluSg SINE Alu -16 294 10 1575 226 52 39 chr4 3944507 3944847 -180343815 - MLT2D LTR ERVL -132 332 1 510 180 17 133 chr4 3944876 3945109 -180343553 + L1ME3A LINE L1 4477 4682 -1533 342 254 0 0 chr4 3945111 3945221 -180343441 + (TG)n Simple_repeat Simple_repeat 2 111 0 814 292 75 53 chr4 3945325 3946110 -180342552 + L1ME3A LINE L1 4732 5532 -707 548 143 51 41 chr4 3946128 3946226 -180342436 + FLAM_A SINE Alu 37 135 -7 447 209 133 0 chr4 3946237 3946342 -180342320 + L1ME3A LINE L1 5554 5672 -559 375 273 93 12 chr4 3946444 3946605 -180342057 + L1ME3A LINE L1 5847 6020 -219 311 282 24 0 chr4 3948330 3948415 -180340247 - MIR SINE MIR -168 94 8 978 151 19 23 chr4 3948641 3949081 -180339581 + (TGGA)n Simple_repeat Simple_repeat 1 438 0 631 127 17 0 chr4 3950260 3950378 -180338284 + (TGGA)n Simple_repeat Simple_repeat 1 120 0 321 355 24 6 chr4 3950387 3950556 -180338106 + (TGGG)n Simple_repeat Simple_repeat 3 174 0 840 158 11 6 chr4 3950763 3950940 -180337722 + (TGGA)n Simple_repeat Simple_repeat 1 178 0 623 243 5 5 chr4 3950962 3951342 -180337320 + (TGGA)n Simple_repeat Simple_repeat 1 380 0 210 158 0 0 chr4 3951349 3951387 -180337275 + (TTA)n Simple_repeat Simple_repeat 3 40 0 202 310 42 0 chr4 3952790 3952861 -180335801 - MIR3 SINE MIR -21 187 114 448 158 21 0 chr4 3952895 3952990 -180335672 + CT-rich Low_complexity Low_complexity 1 97 0 1245 165 53 102 chr4 3954784 3954944 -180333718 - L1PA15 LINE L1 0 6165 6027 2166 108 0 16 chr4 3954944 3955258 -180333404 - AluSg1 SINE Alu 0 309 1 1245 165 53 102 chr4 3955258 3955419 -180333243 - L1PA15 LINE L1 -138 6027 5860 195 207 12 73 chr4 3955424 3955506 -180333156 + L2 LINE L2 3023 3099 -214 294 363 0 0 chr4 3955520 3955699 -180332963 + C-rich Low_complexity Low_complexity 1 179 0 259 209 15 15 chr4 3955733 3955800 -180332862 - LTR16B LTR ERVL -4 460 394 229 287 15 59 chr4 3956192 3956328 -180332334 + MLT1H LTR MaLR 16 145 -404 1728 152 14 0 chr4 3957357 3957647 -180331015 + AluJb SINE Alu 1 294 -18 601 346 146 14 chr4 3957876 3958364 -180330298 - L1MC4 LINE L1 -272 7770 7219 1027 220 65 17 chr4 3958367 3958795 -180329867 - MLT1D LTR MaLR -4 501 1 255 291 24 31 chr4 3958965 3959092 -180329570 - L1MC4 LINE L1 -1055 6987 6862 449 346 181 25 chr4 3959152 3959683 -180328979 - L1MC4a LINE L1 -1128 6680 6067 202 192 12 52 chr4 3959773 3959945 -180328717 + (TG)n Simple_repeat Simple_repeat 2 166 0 342 176 15 48 chr4 3959965 3960516 -180328146 + (TG)n Simple_repeat Simple_repeat 1 532 0 291 154 21 42 chr4 3960552 3960695 -180327967 + (TG)n Simple_repeat Simple_repeat 1 140 0 238 175 23 41 chr4 3960773 3960944 -180327718 + (TG)n Simple_repeat Simple_repeat 1 168 0 350 164 29 29 chr4 3961020 3961191 -180327471 + (TG)n Simple_repeat Simple_repeat 2 172 0 198 94 19 38 chr4 3961233 3961286 -180327376 + (TG)n Simple_repeat Simple_repeat 1 52 0 375 140 28 39 chr4 3961308 3961487 -180327175 + (TG)n Simple_repeat Simple_repeat 2 178 0 380 197 15 47 chr4 3961516 3961799 -180326863 + (TG)n Simple_repeat Simple_repeat 1 273 0 364 160 38 28 chr4 3961810 3962105 -180326557 + (TG)n Simple_repeat Simple_repeat 1 298 0 449 144 48 12 chr4 3962134 3962301 -180326361 + (TG)n Simple_repeat Simple_repeat 2 174 0 1026 301 73 5 chr4 3962492 3962918 -180325744 - L1MC4a LINE L1 -2058 5750 5296 1669 212 13 18 chr4 3965726 3966108 -180322554 - LTR8 LTR ERV1 0 691 312 230 137 41 14 chr4 3966213 3966286 -180322376 + (TG)n Simple_repeat Simple_repeat 2 76 0 1044 298 73 5 chr4 3966477 3966903 -180321759 - L1MC/D LINE L1 -2058 5750 5296 3521 163 18 74 chr4 3969087 3969819 -180318843 - LTR8 LTR ERV1 0 691 1 398 222 16 29 chr4 3970312 3970489 -180318173 + ORSL DNA AcHobo 41 253 -22 3892 118 11 33 chr4 3970489 3970964 -180317698 + MER4A LTR ERV1 1 462 -138 2146 115 0 3 chr4 3970964 3971268 -180317394 + AluSg1 SINE Alu 7 309 0 3892 118 11 33 chr4 3971268 3971405 -180317257 + MER4A LTR ERV1 462 600 0 398 222 16 29 chr4 3971405 3971428 -180317234 + ORSL DNA AcHobo 253 275 0 194 240 0 20 chr4 3971629 3971679 -180316983 + L2 LINE L2 3168 3216 -56 778 176 4 11 chr4 3971726 3972007 -180316655 + (TGGA)n Simple_repeat Simple_repeat 1 278 0 693 193 0 0 chr4 3972024 3972174 -180316488 + (TGGA)n Simple_repeat Simple_repeat 3 152 0 399 205 0 12 chr4 3974423 3974506 -180314156 + MIR SINE MIR 80 161 -101 820 248 96 0 chr4 3974552 3974782 -180313880 - MER83B LTR ERV1 0 378 127 238 226 32 0 chr4 3975164 3975226 -180313436 - MER83B LTR ERV1 -181 197 134 622 224 14 7 chr4 3975284 3975427 -180313235 - MER83C LTR ERV1 -181 192 49 954 281 16 79 chr4 3975526 3976018 -180312644 - MLT1J LTR MaLR -14 497 37 351 127 48 0 chr4 3976602 3976665 -180311997 - MLT1J LTR MaLR -396 71 6 318 276 264 23 chr4 3976671 3976845 -180311817 - L1ME2 LINE L1 -37 6127 5912 225 61 0 0 chr4 3977081 3977114 -180311548 + AluJo SINE Alu 1 33 -266 2475 84 5 11 chr4 3977115 3977494 -180311168 + MER41B LTR ERV1 1 377 -258 648 167 0 0 chr4 3977496 3977610 -180311052 + MER41B LTR ERV1 510 623 -12 1169 195 0 56 chr4 3977617 3977739 -180310923 + AluJo SINE Alu 22 149 -163 1664 153 29 52 chr4 3977739 3978047 -180310615 + AluJb SINE Alu 1 301 -11 1169 195 0 56 chr4 3978047 3978226 -180310436 + AluJo SINE Alu 149 306 -6 2259 95 7 0 chr4 3978620 3978925 -180309737 + AluSg SINE Alu 1 307 -3 353 165 252 68 chr4 3978994 3979097 -180309565 - FLAM_A SINE Alu -9 124 3 589 251 6 16 chr4 3979195 3979378 -180309284 + HAL1b LINE L1 286 466 -882 1848 114 0 29 chr4 3979428 3979700 -180308962 + AluSx SINE Alu 35 298 -14 540 257 14 7 chr4 3979709 3979857 -180308805 + MLT1C LTR MaLR 34 182 -285 * 647 184 85 85 chr4 3979840 3979859 -180308803 - MSTD LTR MaLR -49 345 328 2179 122 0 0 chr4 3979859 3980170 -180308492 + AluSx SINE Alu 1 311 -1 647 184 85 85 chr4 3980170 3980451 -180308211 - MSTD LTR MaLR -66 328 2 817 200 0 24 chr4 3981763 3981928 -180306734 - FAM SINE Alu -5 44 1 2071 123 6 22 chr4 3981954 3982272 -180306390 - AluSq SINE Alu 0 313 1 346 226 24 0 chr4 3982297 3982381 -180306281 - MIR SINE MIR -100 162 77 203 362 61 43 chr4 3982484 3982647 -180306015 + MIR SINE MIR 16 181 -81 217 255 61 0 chr4 3983068 3983152 -180305510 + MIR SINE MIR 104 192 -60 1608 247 119 17 chr4 3983871 3984306 -180304356 - MER69B DNA AcHobo -1342 1184 668 1579 170 53 3 chr4 3984306 3984589 -180304073 + AluJb SINE Alu 1 297 -15 1608 247 119 17 chr4 3984589 3984756 -180303906 - MER69B DNA AcHobo -1858 668 520 591 258 97 24 chr4 3984905 3985235 -180303427 - MER74B LTR ERVL -56 566 213 875 349 69 4 chr4 3985481 3986003 -180302659 + L1M4 LINE L1 3868 4423 -1723 380 249 35 56 chr4 3986018 3986215 -180302447 + L1M4 LINE L1 4462 4654 -1492 752 178 0 30 chr4 3986244 3986379 -180302283 - FLAM_C SINE Alu 0 133 3 724 114 0 2 chr4 3986423 3986680 -180301982 + AluSx SINE Alu 1 308 -4 353 330 27 27 chr4 3986680 3986865 -180301797 - L2 LINE L2 -18 3295 3111 308 299 46 0 chr4 3987898 3987985 -180300677 + MIR SINE MIR 80 170 -92 1455 210 10 10 chr4 3988383 3988693 -180299969 - AluJo SINE Alu -2 310 1 861 146 14 17 chr4 3989483 3989838 -180298824 + (TCCA)n Simple_repeat Simple_repeat 1 353 0 570 217 23 0 chr4 3989867 3990042 -180298620 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 722 153 28 17 chr4 3990062 3990238 -180298424 + (TCCA)n Simple_repeat Simple_repeat 3 180 0 641 182 20 20 chr4 3990267 3990522 -180298140 + (TCCA)n Simple_repeat Simple_repeat 1 255 0 775 150 24 22 chr4 3990541 3991049 -180297613 + (TCCA)n Simple_repeat Simple_repeat 1 509 0 556 167 53 0 chr4 3991079 3991229 -180297433 + (TCCA)n Simple_repeat Simple_repeat 4 161 0 248 283 160 19 chr4 3991244 3991350 -180297312 - L2 LINE L2 -13 3300 3180 225 307 93 13 chr4 3991341 3991491 -180297171 + L3 LINE CR1 1101 1262 -315 * 238 237 126 47 chr4 3991467 3991657 -180297005 - L2 LINE L2 -2250 1064 860 1295 51 93 0 chr4 3991679 3991894 -180296768 - LTR19A LTR ERV1 -245 241 7 509 274 83 34 chr4 3991898 3992102 -180296560 - L2 LINE L2 -2450 864 651 2322 130 33 41 chr4 3992171 3992720 -180295942 - MER4E LTR ERV1 0 766 51 315 32 143 0 chr4 3992731 3992794 -180295868 + CT-rich Low_complexity Low_complexity 2 73 0 6445 56 9 14 chr4 3992794 3993767 -180294895 + SVA Other Other 1 866 -592 6789 62 16 23 chr4 3993798 3994742 -180293920 + SVA Other Other 450 1386 0 460 134 49 120 chr4 3994775 3994839 -180293823 + LTR49-int LTR ERV1 3141 3191 -3140 2093 132 3 19 chr4 3994839 3995157 -180293505 - AluSq SINE Alu 0 313 1 460 134 49 120 chr4 3995157 3995234 -180293428 + LTR49-int LTR ERV1 3191 3272 -3059 309 200 0 0 chr4 3995294 3995354 -180293308 + LTR49-int LTR ERV1 3275 3334 -2997 446 194 20 0 chr4 3995415 3995513 -180293149 + LTR49-int LTR ERV1 3348 3447 -2884 372 56 42 42 chr4 3995715 3995786 -180292876 - MER4B LTR ERV1 -539 71 1 499 240 187 18 chr4 3995786 3996011 -180292651 - L2 LINE L2 -2993 321 59 516 205 169 62 chr4 3996162 3996469 -180292193 + LTR16A1 LTR ERVL 118 457 0 325 333 77 27 chr4 3997871 3998054 -180290608 - L1ME2 LINE L1 -3 6161 5970 449 206 40 16 chr4 3998689 3998815 -180289847 + L1MEc LINE L1 37 165 -6231 1742 127 20 31 chr4 3998894 3999186 -180289476 + AluJo SINE Alu 6 294 -18 209 169 0 78 chr4 4000367 4000444 -180288218 + G-rich Low_complexity Low_complexity 3 73 0 202 246 31 15 chr4 4000634 4000699 -180287963 - MIR3 SINE MIR -132 76 11 222 317 49 0 chr4 4000892 4000974 -180287688 - MIR3 SINE MIR -46 162 77 218 247 106 12 chr4 4001111 4001196 -180287466 + MIR3 SINE MIR 113 205 -3 2236 81 0 7 chr4 4003187 4003483 -180285179 - AluSx SINE Alu 0 312 19 499 186 224 13 chr4 4007640 4007796 -180280866 - MER46A DNA MER2_type 0 236 48 218 279 25 25 chr4 4008145 4008224 -180280438 + L3 LINE CR1 1403 1481 -96 245 306 93 28 chr4 4008877 4008985 -180279677 - MIR3 SINE MIR -87 121 7 195 129 0 0 chr4 4009666 4009697 -180278965 + (CTCTG)n Simple_repeat Simple_repeat 1 31 0 201 39 0 0 chr4 4010469 4010495 -180278167 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 739 139 17 0 chr4 4010497 4010612 -180278050 - FLAM_C SINE Alu -16 117 1 258 237 0 0 chr4 4013587 4013646 -180275016 + C-rich Low_complexity Low_complexity 1 59 0 216 347 51 0 chr4 4014996 4015094 -180273568 - L2 LINE L2 -6 3307 3205 1889 151 7 3 chr4 4018801 4019099 -180269563 + AluSx SINE Alu 1 299 -13 385 272 33 65 chr4 4020923 4021107 -180267555 - L1ME2 LINE L1 -296 5866 5689 331 275 89 108 chr4 4021486 4021755 -180266907 - L1ME3 LINE L1 -170 5975 5712 645 243 121 32 chr4 4021789 4021908 -180266754 - L1ME3 LINE L1 -1224 4905 4798 1532 148 10 79 chr4 4021908 4022213 -180266449 - AluJb SINE Alu -28 284 1 645 243 121 32 chr4 4022213 4022406 -180266256 - L1ME3 LINE L1 -1331 4798 4565 272 275 94 7 chr4 4023162 4023300 -180265362 - L1ME3 LINE L1 -1638 4491 4342 1094 317 108 25 chr4 4023572 4024046 -180264616 - L1ME3 LINE L1 -2173 3956 3523 2211 113 0 0 chr4 4024046 4024339 -180264323 + AluSx SINE Alu 1 293 -19 1094 317 108 25 chr4 4024339 4024718 -180263944 - L1ME3 LINE L1 -2606 3523 3032 386 284 28 124 chr4 4024743 4024961 -180263701 + L1M4 LINE L1 2645 2841 -3305 388 260 83 22 chr4 4024979 4025116 -180263546 - L1ME2 LINE L1 -742 5428 5301 1587 167 13 36 chr4 4025116 4025421 -180263241 - AluJo SINE Alu -14 298 1 388 260 83 22 chr4 4025421 4025583 -180263079 - L1ME2 LINE L1 -869 5301 5121 2269 81 7 0 chr4 4025681 4025977 -180262685 + AluSq SINE Alu 1 298 -15 1875 136 0 11 chr4 4025997 4026283 -180262379 + AluSx SINE Alu 11 293 -19 1952 125 0 72 chr4 4027377 4027575 -180261087 - AluSx SINE Alu -1 311 145 2171 113 16 7 chr4 4027575 4027885 -180260777 - AluSq SINE Alu 0 313 1 1952 125 0 72 chr4 4027885 4028021 -180260641 - AluSx SINE Alu -167 145 1 314 302 109 73 chr4 4028238 4028596 -180260066 - L1ME3 LINE L1 -5746 373 3 528 265 6 6 chr4 4028611 4028773 -180259889 - L1ME2 LINE L1 -3111 3035 2874 453 195 0 23 chr4 4028792 4028879 -180259783 + AluJ/FLAM SINE Alu 1 85 -227 338 330 128 5 chr4 4037117 4037320 -180251342 - MIR SINE MIR -33 229 2 205 322 0 11 chr4 4037359 4037446 -180251216 + (CAGG)n Simple_repeat Simple_repeat 3 88 0 197 216 78 0 chr4 4038262 4038313 -180250349 + MIR SINE MIR 95 149 -113 421 298 9 31 chr4 4040774 4041005 -180247657 + GA-rich Low_complexity Low_complexity 1 225 0 256 183 12 55 chr4 4041030 4041194 -180247468 + GA-rich Low_complexity Low_complexity 4 160 0 233 193 12 56 chr4 4041261 4041422 -180247240 + GA-rich Low_complexity Low_complexity 3 156 0 244 215 11 43 chr4 4041464 4041650 -180247012 + GA-rich Low_complexity Low_complexity 1 180 0 444 277 24 13 chr4 4041685 4042122 -180246540 + GA-rich Low_complexity Low_complexity 1 441 0 212 204 13 40 chr4 4042163 4042315 -180246347 + GA-rich Low_complexity Low_complexity 1 148 0 210 261 29 14 chr4 4044786 4044855 -180243807 + MIR3 SINE MIR 112 181 -27 253 311 104 0 chr4 4048138 4048244 -180240418 - MIR SINE MIR -63 145 32 333 282 150 0 chr4 4049580 4049793 -180238869 + MLT1H LTR MaLR 76 320 -229 296 239 0 65 chr4 4049836 4049936 -180238726 + MLT1G LTR MaLR 383 508 -80 2068 143 0 0 chr4 4051543 4051851 -180236811 - AluSx SINE Alu -4 308 1 193 248 69 59 chr4 4051996 4052097 -180236565 + L2 LINE L2 2992 3093 -179 277 335 78 48 chr4 4052953 4053183 -180235479 + MLT1C LTR MaLR 230 466 -1 255 251 0 73 chr4 4055861 4056040 -180232622 + (CGGG)n Simple_repeat Simple_repeat 4 169 0 315 187 66 0 chr4 4057175 4057266 -180231396 - MER96B DNA MER1_type? -62 355 259 643 163 0 0 chr4 4057267 4057365 -180231297 - AluSg/x SINE Alu -9 303 206 2105 126 0 0 chr4 4057366 4057660 -180231002 - AluSx SINE Alu -18 294 1 888 122 0 36 chr4 4057663 4057802 -180230860 - AluJb SINE Alu -178 134 1 199 77 26 26 chr4 4058129 4058168 -180230494 + (TCCC)n Simple_repeat Simple_repeat 1 39 0 24 0 0 0 chr4 4058531 4058555 -180230107 + GC_rich Low_complexity Low_complexity 1 24 0 514 291 17 17 chr4 4060204 4060383 -180228279 - MER58A DNA MER1_type 0 224 46 375 260 215 6 chr4 4060944 4061121 -180227541 + MIR SINE MIR 46 259 -3 583 265 133 0 chr4 4061489 4061685 -180226977 - MER58A DNA MER1_type -2 222 1 387 252 169 32 chr4 4061943 4062336 -180226326 + MLT1D LTR MaLR 18 463 -4 587 207 0 13 chr4 4063077 4063318 -180225344 + (CA)n Simple_repeat Simple_repeat 1 237 0 681 220 3 0 chr4 4063353 4063709 -180224953 + (CA)n Simple_repeat Simple_repeat 1 357 0 474 246 0 0 chr4 4063732 4063899 -180224763 + (CA)n Simple_repeat Simple_repeat 1 167 0 404 301 0 0 chr4 4063910 4064201 -180224461 + (CA)n Simple_repeat Simple_repeat 1 291 0 348 326 0 29 chr4 4064236 4064267 -180224395 + (CA)n Simple_repeat Simple_repeat 1 31 -136 1117 206 87 59 chr4 4064267 4064622 -180224040 + MLT1A1 LTR MaLR 1 365 0 348 326 0 29 chr4 4064622 4064762 -180223900 + (CA)n Simple_repeat Simple_repeat 31 167 0 25 31 0 0 chr4 4068716 4068748 -180219914 + GC_rich Low_complexity Low_complexity 1 32 0 42 20 0 0 chr4 4068823 4068872 -180219790 + GC_rich Low_complexity Low_complexity 1 49 0 225 316 25 0 chr4 4071575 4071654 -180217008 + MLT1J2 LTR MaLR 92 172 -278 1453 105 16 47 chr4 4071661 4071919 -180216743 + THE1B LTR MaLR 1 250 -114 11946 67 4 4 chr4 4071919 4073572 -180215090 - HERVL LTR ERVL -391 5263 3610 2694 122 21 0 chr4 4073572 4074000 -180214662 + LTR3b LTR ERVK 1 437 0 26808 56 4 8 chr4 4074008 4075774 -180212888 - HERVL-A1 LTR ERVL -2037 3617 1845 2448 81 0 0 chr4 4075774 4076084 -180212578 + AluY SINE Alu 1 310 -1 26808 56 4 8 chr4 4076084 4077949 -180210713 - HERVL-A1 LTR ERVL -3809 1845 1 3160 102 14 7 chr4 4077949 4078390 -180210272 - MLT2A1 LTR ERVL 0 444 1 678 155 0 49 chr4 4078402 4078544 -180210118 - MLT2A2 LTR ERVL -318 135 1 499 281 91 40 chr4 4078549 4078592 -180210070 + L1M4 LINE L1 3355 3394 -2752 2125 127 0 0 chr4 4078592 4078884 -180209778 - AluSg SINE Alu -16 294 3 499 281 91 40 chr4 4078884 4079214 -180209448 + L1M4 LINE L1 3394 3747 -2399 1534 192 3 79 chr4 4079508 4079744 -180208918 - MLT1B LTR MaLR -1 389 193 3297 166 92 7 chr4 4079744 4080329 -180208333 + LTR24C LTR ERV1 1 635 0 1534 192 3 79 chr4 4080329 4080483 -180208179 - MLT1B LTR MaLR -197 193 29 1493 150 108 0 chr4 4080489 4080749 -180207913 - AluJb SINE Alu -24 288 1 2221 122 0 0 chr4 4081057 4081506 -180207156 + AluSx SINE Alu 2 450 0 222 37 0 0 chr4 4081508 4081535 -180207127 + (GGGA)n Simple_repeat Simple_repeat 4 30 0 347 280 34 25 chr4 4083462 4083580 -180205082 + MIR SINE MIR 61 179 -83 197 132 79 0 chr4 4086395 4086433 -180202229 + MIR SINE MIR 106 146 -62 211 308 62 0 chr4 4086781 4086846 -180201816 + MIR SINE MIR 73 141 -67 212 116 93 0 chr4 4090533 4090576 -180198086 + L2 LINE L2 3003 3049 -223 212 305 11 0 chr4 4091466 4091561 -180197101 + G-rich Low_complexity Low_complexity 5 100 0 185 229 306 19 chr4 4091899 4092056 -180196606 + L2 LINE L2 2867 3068 -245 1900 136 85 25 chr4 4097805 4098159 -180190503 + THE1C LTR MaLR 1 375 0 288 263 11 65 chr4 4098567 4098753 -180189909 + (GGGTG)n Simple_repeat Simple_repeat 5 180 0 2338 101 0 0 chr4 4104429 4104736 -180183926 - AluSx SINE Alu 0 312 6 224 238 20 75 chr4 4105829 4105976 -180182686 + C-rich Low_complexity Low_complexity 3 141 0 272 255 0 81 chr4 4106292 4106453 -180182209 + C-rich Low_complexity Low_complexity 2 149 0 323 280 0 50 chr4 4106473 4106655 -180182007 + C-rich Low_complexity Low_complexity 3 175 0 215 324 34 34 chr4 4107828 4107976 -180180686 - MIR SINE MIR -80 182 35 456 254 56 8 chr4 4110563 4110689 -180177973 + MLT1H LTR MaLR 2 133 -416 193 313 45 0 chr4 4112038 4112105 -180176557 + L2 LINE L2 3184 3253 -19 200 132 57 132 chr4 4112523 4112576 -180176086 + MER5B DNA MER1_type 59 107 -71 1528 148 9 50 chr4 4112589 4112907 -180175755 - AluJo SINE Alu -2 310 6 1452 127 51 82 chr4 4112926 4113094 -180175568 - AluSx SINE Alu 0 310 154 2284 97 0 0 chr4 4113094 4113392 -180175270 - AluSx SINE Alu -14 298 1 1452 127 51 82 chr4 4113392 4113542 -180175120 - AluSx SINE Alu -156 154 1 300 205 64 26 chr4 4114513 4114591 -180174071 + L1ME4a LINE L1 6035 6115 -6 239 247 49 12 chr4 4118407 4118488 -180170174 - L2 LINE L2 -3 3310 3227 240 318 87 8 chr4 4121188 4121314 -180167348 + L1P LINE L1 4956 5091 -1055 858 144 81 58 chr4 4122003 4122177 -180166485 + AluJo SINE Alu 50 227 -85 259 313 55 8 chr4 4125768 4125896 -180162766 - MER58A DNA MER1_type 0 136 3 1154 241 148 66 chr4 4126452 4127221 -180161441 - L1MC4 LINE L1 0 8042 7129 1600 276 122 21 chr4 4127282 4127913 -180160749 - L1MC4 LINE L1 -965 7077 6383 704 245 107 28 chr4 4128169 4128422 -180160240 - MER115 DNA AcHobo -11 682 410 242 333 72 9 chr4 4128802 4128913 -180159749 - MIR3 SINE MIR -48 160 43 25 0 0 0 chr4 4130137 4130162 -180158500 + AT_rich Low_complexity Low_complexity 1 25 0 488 275 85 68 chr4 4131305 4131541 -180157121 - L1M4 LINE L1 -1897 4249 4010 324 194 6 56 chr4 4131610 4131770 -180156892 + (TAA)n Simple_repeat Simple_repeat 1 152 0 234 310 0 0 chr4 4131834 4131905 -180156757 - L1M4 LINE L1 -2213 3933 3863 265 264 0 35 chr4 4131917 4132004 -180156658 + L2 LINE L2 3227 3310 -3 367 351 49 9 chr4 4132027 4132252 -180156410 - L1M4 LINE L1 -2309 3837 3604 640 297 100 20 chr4 4132328 4132628 -180156034 + MLT1I LTR MaLR 86 409 0 797 130 73 0 chr4 4132895 4133018 -180155644 - AluJb SINE Alu -179 133 2 542 342 59 5 chr4 4133064 4133661 -180155001 - L1M4 LINE L1 -2969 3177 2549 348 264 88 83 chr4 4133747 4133879 -180154783 - L1M4 LINE L1 -3757 2389 2254 604 192 14 110 chr4 4133879 4134025 -180154637 - FLAM_A SINE Alu 0 133 2 348 264 88 83 chr4 4134025 4134108 -180154554 - L1M4 LINE L1 -3892 2254 2173 637 281 130 34 chr4 4134222 4134460 -180154202 - MIR SINE MIR 0 262 2 862 270 64 19 chr4 4134523 4134834 -180153828 + L2 LINE L2 2151 2475 -839 184 241 76 0 chr4 4134875 4134954 -180153708 + L2 LINE L2 2028 2112 -1202 1765 280 95 30 chr4 4135586 4136181 -180152481 + L1ME3A LINE L1 4628 5183 -987 1401 192 74 62 chr4 4136181 4136520 -180152142 - MER2 DNA MER2_type 0 344 2 1765 280 95 30 chr4 4136520 4137137 -180151525 + L1ME3A LINE L1 5183 5952 -218 1700 139 36 53 chr4 4137137 4137318 -180151344 - AluSx SINE Alu -14 298 122 204 111 0 0 chr4 4137318 4137354 -180151308 + (TTTTG)n Simple_repeat Simple_repeat 2 37 0 1700 139 36 53 chr4 4137354 4137475 -180151187 - AluSx SINE Alu -190 122 1 1765 280 95 30 chr4 4137475 4137704 -180150958 + L1ME3A LINE L1 5952 6165 -5 2089 139 0 0 chr4 4137899 4138202 -180150460 + AluSx SINE Alu 1 303 -9 616 288 106 12 chr4 4138710 4139116 -180149546 + L1MEd LINE L1 110 553 -5843 552 275 61 77 chr4 4139193 4139360 -180149302 + L1MEc LINE L1 790 958 -5438 2040 108 14 0 chr4 4139360 4139655 -180149007 - AluSx SINE Alu -13 299 1 552 275 61 77 chr4 4139655 4139981 -180148681 + L1MEc LINE L1 958 1275 -5121 315 223 39 10 chr4 4139991 4140094 -180148568 + L1MEc LINE L1 1355 1460 -4936 295 273 136 9 chr4 4140408 4140518 -180148144 - L1ME3A LINE L1 -3 6167 6044 232 336 18 26 chr4 4141611 4141724 -180146938 - MIR SINE MIR -73 135 24 272 289 90 19 chr4 4142956 4143112 -180145550 - L3 LINE CR1 -148 1429 1263 213 148 0 49 chr4 4144101 4144162 -180144500 + (TCCC)n Simple_repeat Simple_repeat 1 58 0 2131 112 3 0 chr4 4147914 4148210 -180140452 + AluSx SINE Alu 1 297 -15 1503 180 25 3 chr4 4148755 4149038 -180139624 - AluJo SINE Alu -19 293 5 422 309 65 10 chr4 4149287 4149722 -180138940 + L1MEd LINE L1 695 1174 -5031 2426 114 44 6 chr4 4150595 4150956 -180137706 + THE1C LTR MaLR 1 375 0 10469 120 39 6 chr4 4150956 4152485 -180136177 + THE1C-int LTR MaLR 1 1580 0 2520 129 27 3 chr4 4152486 4152851 -180135811 + THE1C LTR MaLR 2 375 0 4074 165 93 25 chr4 4152870 4153321 -180135341 - L1MA9 LINE L1 -46 6266 5847 279 0 0 0 chr4 4153321 4153352 -180135310 + (CA)n Simple_repeat Simple_repeat 2 32 0 4074 165 93 25 chr4 4153352 4154135 -180134527 - L1MA9 LINE L1 -465 5847 4950 1337 146 5 0 chr4 4154987 4155193 -180133469 + AluJ SINE Alu 1 207 -105 694 108 0 0 chr4 4155254 4155347 -180133315 + AluJ SINE Alu 209 301 -11 231 339 28 18 chr4 4155609 4155718 -180132944 - MER112 DNA MER1_type 0 260 151 270 0 0 0 chr4 4156064 4156094 -180132568 + (TG)n Simple_repeat Simple_repeat 2 31 0 186 188 0 38 chr4 4156564 4156644 -180132018 + (CTGGGG)n Simple_repeat Simple_repeat 3 79 0 421 297 189 26 chr4 4157092 4157435 -180131227 - L2 LINE L2 -670 2644 2246 315 187 66 0 chr4 4260771 4260862 -180027800 - MER96B DNA MER1_type? -62 355 259 643 163 0 0 chr4 4260863 4260961 -180027701 - AluSg/x SINE Alu -9 303 206 2122 122 0 0 chr4 4260962 4261256 -180027406 - AluSx SINE Alu -18 294 1 888 122 0 36 chr4 4261259 4261398 -180027264 - AluJb SINE Alu -178 134 1 199 77 26 26 chr4 4261725 4261764 -180026898 + (TCCC)n Simple_repeat Simple_repeat 1 39 0 24 0 0 0 chr4 4262127 4262151 -180026511 + GC_rich Low_complexity Low_complexity 1 24 0 502 297 16 16 chr4 4263678 4263863 -180024799 - MER58A DNA MER1_type 0 224 40 357 273 209 5 chr4 4264411 4264598 -180024064 + MIR SINE MIR 35 259 -3 569 270 133 0 chr4 4264966 4265162 -180023500 - MER58A DNA MER1_type -2 222 1 379 261 161 33 chr4 4265420 4265819 -180022843 + MLT1C LTR MaLR 18 463 -4 663 245 3 0 chr4 4266560 4267706 -180020956 + (CA)n Simple_repeat Simple_repeat 1 1149 0 320 337 0 29 chr4 4267741 4267772 -180020890 + (CA)n Simple_repeat Simple_repeat 1 31 -136 1116 206 87 59 chr4 4267772 4268127 -180020535 + MLT1A1 LTR MaLR 1 365 0 320 337 0 29 chr4 4268127 4268267 -180020395 + (CA)n Simple_repeat Simple_repeat 31 167 0 8364 147 32 12 chr4 4372230 4373602 -179915060 + MER52A LTR ERV1 375 1755 0 188 250 132 13 chr4 4373834 4373910 -179914752 + MIR SINE MIR 161 245 -17 221 329 12 0 chr4 4374146 4374231 -179914431 - L2 LINE L2 -2 3270 3185 1348 178 15 118 chr4 4374456 4374633 -179914029 - AluJb SINE Alu -5 297 103 2216 64 4 4 chr4 4374633 4374914 -179913748 - AluSp SINE Alu -32 281 1 1942 116 0 47 chr4 4374918 4375100 -179913562 - AluSx SINE Alu -7 305 143 2182 88 17 3 chr4 4375100 4375397 -179913265 - AluY SINE Alu -10 301 1 1942 116 0 47 chr4 4375397 4375534 -179913128 - AluSx SINE Alu -169 143 1 1348 178 15 118 chr4 4375534 4375682 -179912980 - AluJb SINE Alu -202 100 1 352 248 9 28 chr4 4376325 4376434 -179912228 + L1 LINE L1 5174 5280 -866 1055 265 41 32 chr4 4376457 4376869 -179911793 + MLT1J1 LTR MaLR 68 446 0 2139 116 6 0 chr4 4377406 4377717 -179910945 + AluSp SINE Alu 1 313 0 513 133 20 10 chr4 4377806 4377904 -179910758 - LTR54 LTR ERV1 -2 508 410 1136 171 46 0 chr4 4377904 4378121 -179910541 + AluJo SINE Alu 86 312 0 216 158 0 0 chr4 4378130 4378168 -179910494 + GA-rich Low_complexity Low_complexity 1 38 0 1399 139 62 9 chr4 4378168 4378527 -179910135 - LTR54 LTR ERV1 -94 413 1 2260 77 0 0 chr4 4379036 4379322 -179909340 - AluSc SINE Alu -23 286 1 370 209 97 75 chr4 4379484 4379553 -179909109 + MLT1J2 LTR MaLR 59 125 -325 612 150 18 9 chr4 4379553 4379666 -179908996 + L1PB2 LINE L1 6037 6150 -1 370 209 97 75 chr4 4379666 4379730 -179908932 + MLT1J2 LTR MaLR 125 195 -255 370 233 125 33 chr4 4379749 4379869 -179908793 + L2 LINE L2 3141 3271 -1 218 287 32 43 chr4 4379867 4379961 -179908701 - MIR SINE MIR -157 105 13 * 192 40 0 0 chr4 4379961 4379986 -179908676 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 756 231 84 48 chr4 4379986 4380199 -179908463 - L2 LINE L2 -13 3300 3075 763 167 24 0 chr4 4380199 4380325 -179908337 + FLAM_A SINE Alu 1 129 -4 756 231 84 48 chr4 4380325 4380362 -179908300 - L2 LINE L2 -238 3075 3041 1225 303 206 7 chr4 4380395 4381240 -179907422 - L2 LINE L2 -408 2906 1894 1850 158 0 0 chr4 4381310 4381601 -179907061 + AluJb SINE Alu 1 291 -21 2133 186 34 36 chr4 4382267 4382735 -179905927 + MLT1C LTR MaLR 1 467 0 265 232 0 18 chr4 4382857 4382913 -179905749 - L2 LINE L2 0 3313 3259 1821 87 0 4 chr4 4383375 4383617 -179905045 + AluY SINE Alu 1 241 -70 2205 82 0 0 chr4 4384154 4384472 -179904190 + AluSp SINE Alu 1 318 0 2201 90 7 3 chr4 4385238 4385538 -179903124 - AluSg SINE Alu -9 301 1 2056 98 7 3 chr4 4385862 4386159 -179902503 - AluSx SINE Alu -14 298 1 569 316 14 28 chr4 4386160 4386375 -179902287 - MIR SINE MIR -4 258 47 1009 170 0 0 chr4 4386644 4386815 -179901847 - FAM SINE Alu -5 44 1 641 240 112 11 chr4 4387256 4387435 -179901227 + MIR SINE MIR 3 199 -63 930 194 0 21 chr4 4387451 4387642 -179901020 - AluJo SINE Alu -2 310 124 1683 153 50 0 chr4 4387901 4388183 -179900479 - AluJb SINE Alu -16 296 1 2211 91 3 3 chr4 4388285 4388583 -179900079 - AluSp SINE Alu -15 298 1 195 287 96 11 chr4 4388614 4388708 -179899954 - MIR3 SINE MIR -47 161 60 1823 114 13 24 chr4 4388842 4389160 -179899502 - AluSx SINE Alu 0 312 1 2639 125 13 47 chr4 4389797 4390245 -179898417 + Tigger2a DNA MER2_type 1 433 -1 1872 76 76 8 chr4 4390662 4390926 -179897736 + AluSq SINE Alu 1 282 -31 192 40 0 0 chr4 4390926 4390951 -179897711 + (CAAAC)n Simple_repeat Simple_repeat 5 29 0 2679 147 39 30 chr4 4390963 4391191 -179897471 + L1MB2 LINE L1 5655 5879 -292 2007 121 3 3 chr4 4391191 4391489 -179897173 + AluSx SINE Alu 1 298 -14 2679 147 39 30 chr4 4391489 4391769 -179896893 + L1MB2 LINE L1 5879 6168 -3 610 167 0 0 chr4 4391868 4391970 -179896692 - AluJb SINE Alu -76 236 135 1030 127 6 0 chr4 4391971 4392129 -179896533 - AluSg/x SINE Alu -23 287 129 976 195 0 61 chr4 4392128 4392359 -179896303 - AluJb SINE Alu -95 217 1 * 438 277 43 14 chr4 4392521 4392662 -179896000 - L1ME LINE L1 -460 5661 5517 2178 88 3 3 chr4 4393014 4393311 -179895351 + AluSq SINE Alu 1 297 -16 273 57 0 0 chr4 4393325 4393360 -179895302 + (TG)n Simple_repeat Simple_repeat 2 36 0 248 221 47 0 chr4 4393382 4393468 -179895194 - L1MC4 LINE L1 -1339 6703 6614 380 264 6 10 chr4 4393478 4393574 -179895088 - L1MC4 LINE L1 -1339 6983 1995 2228 96 6 16 chr4 4393813 4394125 -179894537 + AluSc SINE Alu 1 309 0 181 273 23 0 chr4 4394184 4394228 -179894434 - L2 LINE L2 -46 3267 3223 21 36 0 0 chr4 4394368 4394396 -179894266 + AT_rich Low_complexity Low_complexity 1 28 0 5442 183 25 58 chr4 4394690 4395208 -179893454 - L1ME LINE L1 -830 5316 4782 1704 190 20 42 chr4 4395208 4395613 -179893049 + MSTD LTR MaLR 1 396 0 5442 183 25 58 chr4 4395613 4396304 -179892358 - L1ME LINE L1 -1364 4782 4069 2015 117 7 3 chr4 4396304 4396603 -179892059 - AluSx SINE Alu -10 302 3 5442 183 25 58 chr4 4396603 4396749 -179891913 - L1ME LINE L1 -2077 4069 4055 2116 128 0 0 chr4 4396749 4397053 -179891609 - AluSg SINE Alu -6 304 1 5442 183 25 58 chr4 4397053 4397119 -179891543 - L1ME LINE L1 -2091 4055 3988 315 232 192 40 chr4 4397154 4397279 -179891383 + MSTC LTR MaLR 1 144 -284 707 225 16 16 chr4 4397283 4397470 -179891192 - L1 LINE L1 -2187 3959 3773 523 141 0 0 chr4 4397664 4397742 -179890920 - AluJ/FLAM SINE Alu -233 79 2 600 200 140 93 chr4 4398016 4398112 -179890550 + MSTD LTR MaLR 1 91 -305 2140 105 0 0 chr4 4398112 4398408 -179890254 - AluSx SINE Alu -16 296 1 600 200 140 93 chr4 4398408 4398585 -179890077 + MSTD LTR MaLR 91 282 -114 979 249 50 80 chr4 4398602 4398993 -179889669 + LTR56 LTR ERV1 9 381 -56 1912 120 17 40 chr4 4398993 4399294 -179889368 - AluSx SINE Alu -18 294 1 979 249 50 80 chr4 4399294 4399350 -179889312 + LTR56 LTR ERV1 381 437 0 483 142 14 177 chr4 4399350 4399426 -179889236 + MSTD LTR MaLR 281 326 -70 3497 94 2 0 chr4 4399426 4399902 -179888760 + L1PA13 LINE L1 5684 6160 -3 483 142 14 177 chr4 4399902 4399964 -179888698 + MSTD LTR MaLR 326 396 0 1901 161 0 0 chr4 4400170 4400480 -179888182 + AluSx SINE Alu 1 310 -2 699 215 17 29 chr4 4400817 4400978 -179887684 + MIR SINE MIR 52 212 -50 2054 132 3 0 chr4 4400978 4401289 -179887373 - AluSx SINE Alu 0 312 1 1583 197 0 10 chr4 4401693 4401982 -179886680 - AluJb SINE Alu -26 286 1 1684 155 10 17 chr4 4401986 4402283 -179886379 - AluJo SINE Alu -17 295 1 900 149 0 8 chr4 4402503 4402637 -179886025 + FLAM_A SINE Alu 1 133 0 1979 130 0 3 chr4 4402869 4403169 -179885493 + AluSx SINE Alu 1 299 -13 1629 193 15 46 chr4 4403251 4403644 -179885018 + MLT2C1 LTR ERVL 17 397 0 189 287 96 32 chr4 4403657 4403751 -179884911 - L2 LINE L2 -18 3254 3155 2281 105 0 0 chr4 4404124 4404437 -179884225 + AluSq SINE Alu 1 313 0 23 68 0 0 chr4 4404551 4404595 -179884067 + AT_rich Low_complexity Low_complexity 1 44 0 898 131 0 115 chr4 4405081 4405272 -179883390 + AluSg/x SINE Alu 136 304 -8 2092 76 14 7 chr4 4405487 4405778 -179882884 - AluSc SINE Alu -16 293 1 180 0 0 0 chr4 4406085 4406105 -179882557 + (TTG)n Simple_repeat Simple_repeat 2 21 0 595 118 20 29 chr4 4406107 4406209 -179882453 - AluSg/x SINE Alu -27 285 185 1569 163 62 14 chr4 4406209 4406576 -179882086 + L1M3 LINE L1 5241 5624 -550 2192 146 0 0 chr4 4406579 4406887 -179881775 - AluSx SINE Alu -4 308 1 1053 97 8 0 chr4 4406888 4407022 -179881640 - AluSq/x SINE Alu -178 135 1 842 189 12 0 chr4 4407022 4407191 -179881471 + L1M3 LINE L1 5625 5795 -388 248 141 188 0 chr4 4407196 4407260 -179881402 + L1MB3 LINE L1 6101 6176 -7 2349 148 69 29 chr4 4407264 4407744 -179880918 + L1MB8 LINE L1 5679 6177 -1 2392 85 3 3 chr4 4408027 4408332 -179880330 + AluSc SINE Alu 1 305 -4 373 336 118 0 chr4 4408403 4408632 -179880030 + L1MC/D LINE L1 5386 5641 -2167 349 370 81 6 chr4 4408649 4408674 -179879988 - L1MC4a LINE L1 -1901 5907 5885 2244 79 48 3 chr4 4408674 4408965 -179879697 - AluY SINE Alu -7 304 1 349 370 81 6 chr4 4408965 4409112 -179879550 - L1MC4a LINE L1 -1923 5885 5722 720 200 8 0 chr4 4409132 4409257 -179879405 - FLAM_A SINE Alu -7 126 1 2130 80 42 7 chr4 4409264 4409552 -179879110 - AluY SINE Alu -13 298 1 920 151 0 0 chr4 4409739 4409865 -179878797 + FLAM_C SINE Alu 4 129 -14 766 246 111 63 chr4 4410465 4410578 -179878084 - L2 LINE L2 -4 3309 3203 1985 121 48 58 chr4 4410578 4410957 -179877705 + THE1C LTR MaLR 1 375 0 766 246 111 63 chr4 4410957 4411177 -179877485 - L2 LINE L2 -110 3203 2960 231 281 112 0 chr4 4411664 4411753 -179876909 + L2 LINE L2 2315 2413 -901 222 333 16 0 chr4 4411754 4411817 -179876845 - L2 LINE L2 0 3272 3209 669 178 60 19 chr4 4412440 4412628 -179876034 + MER52A LTR ERV1 217 538 -740 976 214 25 79 chr4 4412645 4412963 -179875699 + AluJo SINE Alu 2 302 0 391 391 41 10 chr4 4413019 4413216 -179875446 + L1MEc LINE L1 199 401 -5995 334 243 37 19 chr4 4413321 4413428 -179875234 - L1MC4a LINE L1 -1870 5938 5830 1766 170 3 10 chr4 4414223 4414512 -179874150 + AluJo SINE Alu 5 291 -21 368 188 0 0 chr4 4415167 4415231 -179873431 + FLAM_A SINE Alu 1 64 -68 234 294 165 9 chr4 4415242 4415351 -179873311 - L2 LINE L2 -2 3270 3145 1314 147 20 12 chr4 4416147 4416399 -179872263 + MER2 DNA MER2_type 35 288 -57 352 239 14 0 chr4 4416434 4416505 -179872157 + MER2 DNA MER2_type 273 344 -1 2010 108 52 7 chr4 4416902 4417189 -179871473 + AluSx SINE Alu 1 300 -12 731 261 51 4 chr4 4417920 4418154 -179870508 - L1MC4a LINE L1 -619 5545 5301 204 40 0 0 chr4 4418158 4418183 -179870479 + (CA)n Simple_repeat Simple_repeat 1 25 0 1492 242 98 68 chr4 4418188 4418311 -179870351 - L1MC4a LINE L1 -1538 4608 4490 2341 100 0 3 chr4 4418311 4418612 -179870050 - AluSx SINE Alu -12 300 1 1492 242 98 68 chr4 4418612 4418694 -179869968 - L1MC4a LINE L1 -1656 4490 4412 815 160 0 0 chr4 4418694 4418819 -179869843 - FLAM_A SINE Alu -7 126 2 1492 242 98 68 chr4 4418819 4418997 -179869665 - L1MC4a LINE L1 -1734 4412 4241 853 132 0 29 chr4 4418997 4419133 -179869529 + FLAM_C SINE Alu 1 132 -1 1492 242 98 68 chr4 4419133 4419550 -179869112 - L1MC4a LINE L1 -1905 4241 3782 23 0 0 0 chr4 4419704 4419727 -179868935 + AT_rich Low_complexity Low_complexity 1 23 0 351 322 136 12 chr4 4419983 4420225 -179868437 - L2 LINE L2 -482 2832 2561 1131 166 6 0 chr4 4420481 4420656 -179868006 - AluJb SINE Alu -3 309 134 2089 82 36 52 chr4 4420656 4420961 -179867701 - AluSg SINE Alu -10 300 1 847 147 0 0 chr4 4421439 4421555 -179867107 + FLAM_C SINE Alu 2 117 -16 2262 95 0 14 chr4 4421560 4421854 -179866808 - AluSx SINE Alu -22 290 1 320 272 44 33 chr4 4421989 4422169 -179866493 - L1MC5 LINE L1 -48 7913 7732 251 172 198 43 chr4 4422175 4422291 -179866371 - L1ME4a LINE L1 -6 6115 5982 257 274 174 26 chr4 4422612 4422802 -179865860 - MIR SINE MIR -33 229 12 28 29 0 0 chr4 4423261 4423296 -179865366 + AT_rich Low_complexity Low_complexity 1 35 0 862 128 0 0 chr4 4423296 4423413 -179865249 - FLAM_C SINE Alu -15 118 2 5658 111 72 42 chr4 4423642 4424505 -179864157 - LTR13 LTR ERVK -12 995 97 2514 46 0 0 chr4 4424505 4424824 -179863838 - AluY SINE Alu 0 319 1 5658 111 72 42 chr4 4424824 4424925 -179863737 - LTR13 LTR ERVK -910 97 1 748 86 23 31 chr4 4424966 4425094 -179863568 + LTR54B LTR ERV1 5 131 -367 1207 72 63 31 chr4 4425094 4425306 -179863356 + MER57B-int LTR ERV1 7279 7537 0 2900 118 18 18 chr4 4425306 4425740 -179862922 + MER57B LTR ERV1 1 434 0 1867 224 54 17 chr4 4425854 4426372 -179862290 + MER72 LTR ERV1 12 548 -174 3951 159 99 38 chr4 4426382 4427193 -179861469 - MER21B LTR ERV1 -1 862 3 1808 119 79 0 chr4 4427227 4427504 -179861158 + AluSx SINE Alu 1 299 -13 735 108 0 0 chr4 4427651 4427753 -179860909 - U6 snRNA snRNA -5 102 1 4312 117 11 17 chr4 4428093 4428545 -179860117 - MER41B LTR ERV1 0 635 187 1819 127 92 0 chr4 4428545 4428829 -179859833 - AluSx SINE Alu -2 310 1 4312 117 11 17 chr4 4428829 4429015 -179859647 - MER41B LTR ERV1 -448 187 1 285 343 66 15 chr4 4429297 4429434 -179859228 - MIR SINE MIR -11 251 108 2109 123 0 0 chr4 4431415 4431726 -179856936 - AluSx SINE Alu 0 311 1 2446 109 0 0 chr4 4432158 4432471 -179856191 - AluSq SINE Alu 0 313 1 2377 100 0 0 chr4 4432652 4432953 -179855709 - AluSx SINE Alu -11 301 1 2374 90 0 10 chr4 4433953 4434254 -179854408 - AluSg SINE Alu -12 298 1 276 53 0 0 chr4 4434280 4434318 -179854344 + (CA)n Simple_repeat Simple_repeat 2 39 0 525 32 0 0 chr4 4434785 4434848 -179853814 + (CA)n Simple_repeat Simple_repeat 1 63 0 971 190 28 6 chr4 4435772 4435951 -179852711 + AluJo SINE Alu 1 183 -129 779 122 7 58 chr4 4436171 4436310 -179852352 + FLAM_C SINE Alu 2 133 0 2336 65 41 0 chr4 4436627 4436917 -179851745 - AluY SINE Alu -9 302 1 377 202 131 20 chr4 4437470 4437569 -179851093 + MER58B DNA MER1_type 232 341 0 266 241 167 19 chr4 4437857 4437965 -179850697 + L2 LINE L2 3142 3265 -7 2146 114 3 25 chr4 4438008 4438324 -179850338 + AluSc SINE Alu 1 309 0 1491 185 18 78 chr4 4438433 4438654 -179850008 + MLT1A1 LTR MaLR 5 195 -170 775 174 0 36 chr4 4438654 4438792 -179849870 - FLAM_C SINE Alu 0 133 1 1491 185 18 78 chr4 4438792 4438954 -179849708 + MLT1A1 LTR MaLR 195 365 0 471 236 19 0 chr4 4439118 4439224 -179849438 - MIR SINE MIR -48 214 107 471 76 0 0 chr4 4439446 4439512 -179849150 - AluSc SINE Alu -6 303 238 1314 106 22 0 chr4 4439513 4439693 -179848969 - AluSq SINE Alu -129 184 1 722 284 222 16 chr4 4440044 4440801 -179847861 + L2 LINE L2 719 1631 -1683 348 257 119 95 chr4 4440831 4441201 -179847461 + L2 LINE L2 2522 2900 -414 528 173 29 29 chr4 4441359 4441463 -179847199 + L2 LINE L2 3210 3313 0 253 191 0 0 chr4 4442781 4442823 -179845839 + L1MB7 LINE L1 5834 5875 -293 2226 125 0 0 chr4 4442823 4443120 -179845542 + AluSx SINE Alu 1 297 -15 698 177 0 0 chr4 4443120 4443250 -179845412 + L1MB7 LINE L1 6054 6183 -1 376 281 70 12 chr4 4443579 4443750 -179844912 + MIR3 SINE MIR 9 189 -19 1699 172 37 24 chr4 4444549 4444846 -179843816 + AluJb SINE Alu 1 301 -11 402 283 9 44 chr4 4444895 4445008 -179843654 + L2 LINE L2 3164 3272 0 297 232 43 0 chr4 4445184 4445253 -179843409 + MIR SINE MIR 8 79 -183 1003 105 0 0 chr4 4445315 4445448 -179843214 - FLAM_C SINE Alu 0 133 1 1078 223 92 4 chr4 4445549 4445822 -179842840 + L1MC4a LINE L1 5411 5707 -2101 489 290 103 51 chr4 4445915 4446205 -179842457 + L1MC4a LINE L1 5824 6098 -1710 2604 36 3 10 chr4 4446205 4446508 -179842154 + AluY SINE Alu 1 301 -10 489 290 103 51 chr4 4446508 4446606 -179842056 + L1MC4a LINE L1 6098 6190 -1618 2364 120 0 0 chr4 4446606 4446907 -179841755 - AluSx SINE Alu -11 301 1 489 290 103 51 chr4 4446907 4446998 -179841664 + L1MC4a LINE L1 6190 6372 -1436 180 0 0 0 chr4 4447002 4447022 -179841640 + (TTG)n Simple_repeat Simple_repeat 2 21 0 2223 100 7 0 chr4 4447024 4447305 -179841357 - AluSx SINE Alu -16 296 14 712 215 130 14 chr4 4447312 4447535 -179841127 + L1MB3 LINE L1 5934 6182 -1 2283 91 40 0 chr4 4447543 4447840 -179840822 + AluY SINE Alu 1 309 -2 2205 94 49 0 chr4 4447882 4448170 -179840492 + AluSp SINE Alu 3 304 -9 181 381 48 0 chr4 4449145 4449229 -179839433 - L2 LINE L2 0 3272 3185 1661 202 10 10 chr4 4449321 4449628 -179839034 - AluJo SINE Alu -5 307 1 348 290 65 0 chr4 4449635 4449742 -179838920 - MIR SINE MIR -117 145 32 396 294 28 28 chr4 4449748 4449925 -179838737 + MER104 DNA MER2_type 1 177 -3 2098 111 24 0 chr4 4450584 4450881 -179837781 + AluSx SINE Alu 1 304 -8 2429 93 0 3 chr4 4450974 4451285 -179837377 - AluY SINE Alu -1 310 1 2226 122 0 3 chr4 4451314 4451610 -179837052 - AluSx SINE Alu -17 295 1 845 147 0 0 chr4 4451687 4451823 -179836839 + AluSg/x SINE Alu 174 309 -1 2458 149 99 62 chr4 4451824 4452388 -179836274 - L1MD2 LINE L1 -291 6068 5484 459 0 0 0 chr4 4452428 4452479 -179836183 + (TG)n Simple_repeat Simple_repeat 2 52 0 1549 170 24 35 chr4 4452482 4452771 -179835891 - AluJo SINE Alu -26 286 1 476 267 182 15 chr4 4452822 4453099 -179835563 + L2 LINE L2 2784 3104 -209 282 304 236 20 chr4 4453344 4453492 -179835170 - MER5A DNA MER1_type 0 189 10 379 296 127 55 chr4 4453845 4454098 -179834564 + L1ME4a LINE L1 5840 6110 -11 2476 74 6 3 chr4 4454152 4454463 -179834199 + AluSp SINE Alu 1 312 -1 1223 183 70 4 chr4 4454518 4454791 -179833871 + MER58B DNA MER1_type 43 333 -8 3621 188 37 1 chr4 4454791 4455584 -179833078 + L1M4 LINE L1 4517 5337 -809 2290 126 0 0 chr4 4455615 4455916 -179832746 + AluSq SINE Alu 1 301 -12 1049 270 77 38 chr4 4456086 4456564 -179832098 + L2 LINE L2 2503 3012 -301 922 187 5 20 chr4 4456564 4456762 -179831900 + FRAM SINE Alu 1 170 -6 203 191 24 0 chr4 4456767 4456809 -179831853 + L2 LINE L2 3032 3074 -239 1679 154 0 45 chr4 4456814 4456959 -179831703 + AluSx SINE Alu 1 128 -184 2282 67 0 54 chr4 4456959 4457274 -179831388 + AluY SINE Alu 1 298 -13 1679 154 0 45 chr4 4457274 4457414 -179831248 + AluSx SINE Alu 128 273 -39 224 59 29 0 chr4 4457421 4457455 -179831207 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 426 98 16 0 chr4 4457467 4457528 -179831134 + U7 snRNA snRNA 2 63 0 23 0 0 0 chr4 4457531 4457554 -179831108 + AT_rich Low_complexity Low_complexity 1 23 0 705 233 93 23 chr4 4457570 4457785 -179830877 + L2 LINE L2 3084 3313 0 21 57 0 0 chr4 4458204 4458239 -179830423 + AT_rich Low_complexity Low_complexity 1 35 0 2116 119 0 0 chr4 4458292 4458578 -179830084 + AluSg SINE Alu 1 286 -24 2132 109 0 0 chr4 4458824 4459109 -179829553 - AluSx SINE Alu -22 290 6 183 100 0 0 chr4 4460956 4460986 -179827676 + (CGGGGG)n Simple_repeat Simple_repeat 4 33 0 261 198 0 0 chr4 4460988 4461069 -179827593 + (CGG)n Simple_repeat Simple_repeat 3 83 0 528 16 0 0 chr4 4461069 4461130 -179827532 + (CTG)n Simple_repeat Simple_repeat 1 61 0 28 61 0 0 chr4 4461354 4461403 -179827259 + GC_rich Low_complexity Low_complexity 1 49 0 377 275 0 53 chr4 4461552 4461741 -179826921 + (CGGGG)n Simple_repeat Simple_repeat 1 179 0 197 62 0 31 chr4 4461752 4461784 -179826878 + (CGGGG)n Simple_repeat Simple_repeat 4 34 0 194 209 0 31 chr4 4461819 4461948 -179826714 + (CGGGG)n Simple_repeat Simple_repeat 5 129 0 784 144 24 8 chr4 4462945 4463070 -179825592 + FRAM SINE Alu 28 154 -22 2186 98 10 3 chr4 4463084 4463380 -179825282 + AluSx SINE Alu 6 303 -9 1319 247 122 19 chr4 4463454 4463931 -179824731 + MLT1E LTR MaLR 8 533 -60 2241 156 48 0 chr4 4464021 4464393 -179824269 - MLT1B LTR MaLR 0 390 1 908 258 124 34 chr4 4464404 4464846 -179823816 + MLT1J LTR MaLR 17 498 -13 2220 102 3 0 chr4 4465422 4465726 -179822936 + AluSx SINE Alu 6 310 -2 344 245 39 10 chr4 4465749 4465851 -179822811 + L1ME4a LINE L1 5998 6102 -19 315 347 47 40 chr4 4466380 4466530 -179822132 - L1MEd LINE L1 -3950 2179 2029 1954 128 0 33 chr4 4466551 4466857 -179821805 + AluSx SINE Alu 1 296 -16 662 323 72 32 chr4 4466876 4467053 -179821609 - L1MEd LINE L1 -4320 1990 1822 2023 146 0 0 chr4 4467053 4467354 -179821308 + AluSx SINE Alu 1 301 -11 662 323 72 32 chr4 4467354 4467674 -179820988 - L1MEd LINE L1 -4488 1822 1458 2560 55 0 3 chr4 4467674 4467984 -179820678 - AluY SINE Alu -2 309 1 662 323 72 32 chr4 4467984 4468139 -179820523 - L1MEd LINE L1 -4852 1458 1311 457 312 73 65 chr4 4468601 4469334 -179819328 - L1MEd LINE L1 -4864 1255 540 2177 92 0 0 chr4 4469544 4469828 -179818834 + AluSc SINE Alu 5 288 -21 2114 196 56 0 chr4 4470070 4470463 -179818199 + MER47B DNA MER2_type 2 416 -2 599 100 260 0 chr4 4470496 4470596 -179818066 + AluSg SINE Alu 6 131 -179 2088 116 3 22 chr4 4470596 4470907 -179817755 + AluSq SINE Alu 5 309 -4 583 298 109 12 chr4 4470907 4471236 -179817426 + L1MC/D LINE L1 4829 5189 -957 226 248 17 94 chr4 4471236 4471353 -179817309 + L1MEc LINE L1 39 146 -6250 315 296 82 25 chr4 4473897 4474140 -179814522 - MLT2E LTR ERVL -338 290 34 2180 87 0 14 chr4 4474447 4474734 -179813928 - AluSx SINE Alu -17 295 13 2008 118 26 3 chr4 4474888 4475194 -179813468 - AluSp SINE Alu 0 313 1 2632 26 0 3 chr4 4475205 4475512 -179813150 - AluY SINE Alu -5 306 1 458 167 67 0 chr4 4475872 4475992 -179812670 - L1PA12 LINE L1 -115 6053 5926 1770 166 7 0 chr4 4476093 4476404 -179812258 - AluJo SINE Alu 0 312 1 305 302 54 11 chr4 4476501 4476613 -179812049 + L1MC/D LINE L1 5550 5666 -476 2974 175 39 24 chr4 4476614 4476797 -179811865 + L1MB3 LINE L1 5585 5764 -419 1864 162 3 3 chr4 4476797 4477100 -179811562 + AluJb SINE Alu 1 303 -9 2974 175 39 24 chr4 4477100 4477462 -179811200 + L1MB3 LINE L1 5764 6142 -41 2344 86 0 0 chr4 4477462 4477775 -179810887 + AluSq SINE Alu 1 313 0 2974 175 39 24 chr4 4477775 4477818 -179810844 + L1MB3 LINE L1 6142 6183 0 665 309 62 7 chr4 4477818 4478122 -179810540 + L1MC4a LINE L1 4650 4970 -1176 245 169 51 0 chr4 4478143 4478202 -179810460 - HAL1 LINE L1 -420 2087 2026 398 353 77 32 chr4 4478219 4478440 -179810222 + L1MC4a LINE L1 5668 5898 -1910 247 345 52 17 chr4 4479878 4480052 -179808610 + L2 LINE L2 3079 3258 -55 3879 229 113 66 chr4 4480256 4481130 -179807532 + Charlie1a DNA MER1_type 1 833 -1928 2162 58 0 81 chr4 4481130 4481440 -179807222 + AluY SINE Alu 14 298 -13 3879 229 113 66 chr4 4481440 4481896 -179806766 + Charlie1a DNA MER1_type 833 1401 -1360 2448 77 0 0 chr4 4481896 4482207 -179806455 - AluY SINE Alu 0 311 1 3879 229 113 66 chr4 4482207 4482265 -179806397 + Charlie1a DNA MER1_type 1401 1455 0 237 274 105 8 chr4 4482281 4482405 -179806257 - L1M3 LINE L1 -539 5641 5506 312 350 149 35 chr4 4482477 4482899 -179805763 - L1M3 LINE L1 -1444 4702 4121 2290 91 10 0 chr4 4482899 4483208 -179805454 - AluSx SINE Alu 0 312 1 312 350 149 35 chr4 4483208 4483385 -179805277 - L1M3 LINE L1 -2025 4121 3966 226 259 17 0 chr4 4484171 4484229 -179804433 - MER63 DNA MER1_type -272 789 731 244 331 19 69 chr4 4484592 4484752 -179803910 + L2 LINE L2 2609 2760 -554 188 244 56 11 chr4 4485081 4485171 -179803491 + L2 LINE L2 2882 2975 -339 299 318 98 0 chr4 4485212 4485344 -179803318 + L2 LINE L2 3119 3263 -50 28 0 0 0 chr4 4485970 4485998 -179802664 + GC_rich Low_complexity Low_complexity 1 28 0 282 298 36 0 chr4 4486336 4486420 -179802242 - MIR SINE MIR -72 136 50 2328 72 26 0 chr4 4486447 4486751 -179801911 + AluSq SINE Alu 1 312 -1 271 279 0 13 chr4 4487793 4487872 -179800790 + L2 LINE L2 2987 3064 -208 499 267 67 0 chr4 4488162 4488312 -179800350 - MIR SINE MIR -63 199 40 180 172 0 0 chr4 4488834 4488863 -179799799 - SUBTEL_sa Satellite Satellite -133 41 13 274 289 22 37 chr4 4488983 4489118 -179799544 + L1ME4a LINE L1 5978 6110 -11 393 355 29 6 chr4 4489259 4489431 -179799231 + MIR SINE MIR 21 196 -66 261 83 0 0 chr4 4490263 4490299 -179798363 + (A)n Simple_repeat Simple_repeat 1 36 0 290 274 33 16 chr4 4490354 4490480 -179798182 + MIR SINE MIR 56 183 -62 192 315 158 0 chr4 4494617 4494744 -179793918 + MIR3 SINE MIR 1 147 -61 2317 95 0 0 chr4 4504597 4504902 -179783760 + AluSq SINE Alu 1 305 -8 1708 207 128 24 chr4 4508905 4509412 -179779250 + MER68 LTR ERV1 1 560 -2 210 186 70 0 chr4 4510749 4510792 -179777870 + L2 LINE L2 3227 3272 0 1479 219 34 8 chr4 4511063 4511415 -179777247 + MLT1A1 LTR MaLR 5 365 0 405 158 67 6 chr4 4512211 4512375 -179776287 + (TG)n Simple_repeat Simple_repeat 1 174 0 264 196 54 18 chr4 4512390 4512558 -179776104 + (TG)n Simple_repeat Simple_repeat 1 174 0 461 139 66 12 chr4 4512640 4512806 -179775856 + (TG)n Simple_repeat Simple_repeat 1 175 0 184 143 71 0 chr4 4512852 4512922 -179775740 + (TG)n Simple_repeat Simple_repeat 1 75 0 186 143 0 0 chr4 4513274 4513309 -179775353 + (TCC)n Simple_repeat Simple_repeat 1 35 0 854 204 0 19 chr4 4515455 4515612 -179773050 - AluJb SINE Alu -21 291 138 23 0 0 0 chr4 4516056 4516079 -179772583 + AT_rich Low_complexity Low_complexity 1 23 0 283 333 49 14 chr4 4519673 4519817 -179768845 - MIR SINE MIR -75 187 39 477 244 0 9 chr4 4519945 4520060 -179768602 + L1MB8 LINE L1 6064 6177 -1 309 306 113 19 chr4 4520995 4521155 -179767507 - MIR SINE MIR -67 195 21 183 156 0 0 chr4 4522971 4523003 -179765659 + (CA)n Simple_repeat Simple_repeat 1 32 0 2478 85 0 0 chr4 4523292 4523585 -179765077 - AluSx SINE Alu -18 294 2 2828 7 0 0 chr4 4524897 4525193 -179763469 - AluYa5 SINE Alu -15 296 1 244 288 88 40 chr4 4525402 4525527 -179763135 - MIR SINE MIR 0 262 132 216 321 104 19 chr4 4526321 4526427 -179762235 - L2 LINE L2 0 3313 3199 215 346 0 0 chr4 4527674 4527752 -179760910 + L2 LINE L2 3227 3304 -9 675 297 50 5 chr4 4528331 4528550 -179760112 + MIR SINE MIR 18 246 -16 27 29 0 0 chr4 4529759 4529793 -179758869 + AT_rich Low_complexity Low_complexity 1 34 0 21 36 0 0 chr4 4530237 4530265 -179758397 + AT_rich Low_complexity Low_complexity 1 28 0 2446 81 0 7 chr4 4530733 4531041 -179757621 + AluSx SINE Alu 1 306 -6 28 48 0 0 chr4 4535991 4536033 -179752629 + AT_rich Low_complexity Low_complexity 1 42 0 1229 153 35 9 chr4 4536148 4536377 -179752285 - MER46A DNA MER2_type 0 236 2 508 241 90 66 chr4 4536623 4536835 -179751827 + L1ME4a LINE L1 5900 6116 -5 1577 178 3 53 chr4 4536946 4537249 -179751413 - AluJo SINE Alu -22 290 3 27 0 0 26 chr4 4537249 4537260 -179751402 + AT_rich Low_complexity Low_complexity 1 11 -26 643 202 8 8 chr4 4537260 4537389 -179751273 - FLAM_C SINE Alu -2 131 3 27 0 0 26 chr4 4537389 4537415 -179751247 + AT_rich Low_complexity Low_complexity 11 37 0 636 279 125 43 chr4 4538751 4538913 -179749749 + L1ME1 LINE L1 5743 5890 -276 1582 177 37 31 chr4 4538913 4539207 -179749455 - AluJo SINE Alu -16 296 1 636 279 125 43 chr4 4539207 4539435 -179749227 + L1ME1 LINE L1 5890 6165 -1 338 252 230 0 chr4 4539995 4540130 -179748532 + MER5C DNA MER1_type 85 250 -74 2312 117 0 3 chr4 4540383 4540690 -179747972 - AluSx SINE Alu -6 306 1 2324 88 10 0 chr4 4542380 4542676 -179745986 - AluSq SINE Alu -14 299 1 2270 126 3 0 chr4 4543412 4543721 -179744941 + AluSx SINE Alu 1 310 -2 621 311 40 18 chr4 4544143 4544368 -179744294 + MIR SINE MIR 14 243 -19 1982 164 0 7 chr4 4545183 4545482 -179743180 - AluJb SINE Alu -15 297 1 565 271 105 22 chr4 4546076 4546305 -179742357 + MLT1J2 LTR MaLR 203 450 0 787 241 45 0 chr4 4548118 4548317 -179740345 - MER3 DNA MER1_type 0 209 2 1482 203 0 45 chr4 4549559 4549870 -179738792 + AluJo SINE Alu 1 297 -15 344 289 100 22 chr4 4549884 4550064 -179738598 + MLT1K LTR MaLR 395 588 0 256 272 29 69 chr4 4550236 4550409 -179738253 - HAL1b LINE L1 -437 911 746 2501 77 10 3 chr4 4550465 4550776 -179737886 + AluSp SINE Alu 1 313 0 309 250 0 0 chr4 4551147 4551211 -179737451 - HAL1 LINE L1 -628 1879 1816 1056 135 214 44 chr4 4551230 4551482 -179737180 - AluJo SINE Alu -7 295 1 1774 153 26 35 chr4 4551562 4551875 -179736787 - AluJo SINE Alu -2 310 1 1682 191 30 0 chr4 4551896 4552194 -179736468 - AluJb SINE Alu -5 307 1 2884 133 64 2 chr4 4552195 4552693 -179735969 - L1MB3 LINE L1 -43 6140 5612 192 186 17 85 chr4 4553134 4553193 -179735469 + MIR SINE MIR 89 143 -119 417 289 64 0 chr4 4553643 4553799 -179734863 - MER97a DNA MER1_type? -715 179 14 463 191 16 165 chr4 4554409 4554501 -179734161 + MER5A DNA MER1_type 1 105 -84 2208 90 0 0 chr4 4554501 4554778 -179733884 + AluY SINE Alu 20 296 -15 2403 78 0 38 chr4 4554778 4555098 -179733564 + AluY SINE Alu 1 308 -3 463 191 16 165 chr4 4555098 4555198 -179733464 + MER5A DNA MER1_type 103 165 -24 324 349 92 13 chr4 4555559 4555711 -179732951 - L1ME4a LINE L1 -6 6115 5952 330 115 0 51 chr4 4555948 4556026 -179732636 + (TTCC)n Simple_repeat Simple_repeat 4 77 0 1619 153 102 4 chr4 4556031 4556306 -179732356 - AluJb SINE Alu -10 302 1 233 194 32 32 chr4 4556355 4556417 -179732245 - L1ME4a LINE L1 -379 5785 5724 344 317 219 3 chr4 4556560 4556948 -179731714 + L2 LINE L2 1466 1937 -1377 515 289 52 65 chr4 4557590 4558037 -179730625 + L2 LINE L2 2834 3274 -39 1634 169 18 14 chr4 4558755 4559034 -179729628 + AluJb SINE Alu 1 280 -32 249 33 0 0 chr4 4559034 4559064 -179729598 + (GGAAA)n Simple_repeat Simple_repeat 1 30 0 2185 107 3 20 chr4 4560755 4561055 -179727607 + AluSx SINE Alu 1 295 -17 223 221 0 29 chr4 4561073 4561141 -179727521 + C-rich Low_complexity Low_complexity 1 66 0 299 327 0 0 chr4 4562049 4562199 -179726463 + (CA)n Simple_repeat Simple_repeat 2 151 0 245 297 11 0 chr4 4562214 4562305 -179726357 + (CA)n Simple_repeat Simple_repeat 2 93 0 210 71 0 0 chr4 4562320 4562348 -179726314 + (CA)n Simple_repeat Simple_repeat 2 29 0 297 56 0 0 chr4 4563152 4563188 -179725474 + U2 snRNA snRNA 1 36 -152 2539 62 0 0 chr4 4565610 4565915 -179722747 + AluY SINE Alu 1 305 -6 183 80 0 0 chr4 4566995 4567020 -179721642 + (GAAA)n Simple_repeat Simple_repeat 3 27 0 2562 53 0 10 chr4 4567966 4568268 -179720394 + AluY SINE Alu 1 299 -12 228 348 8 59 chr4 4569847 4569965 -179718697 - L2 LINE L2 0 3313 3202 2199 113 3 19 chr4 4570160 4570478 -179718184 + AluSq SINE Alu 1 313 0 3464 226 63 79 chr4 4571024 4572063 -179716599 + L1MEc LINE L1 24 1077 -5319 2202 125 7 0 chr4 4572063 4572360 -179716302 + AluSx SINE Alu 1 299 -13 3464 226 63 79 chr4 4572360 4572619 -179716043 + L1MEc LINE L1 1077 1300 -5096 2476 87 0 0 chr4 4572619 4572930 -179715732 + AluY SINE Alu 1 311 0 3464 226 63 79 chr4 4572930 4573062 -179715600 + L1MEc LINE L1 1300 1433 -4963 911 151 19 25 chr4 4573075 4573234 -179715428 - AluJb SINE Alu -45 267 110 2049 129 0 3 chr4 4574566 4574853 -179713809 + AluSg SINE Alu 1 286 -24 37369 95 10 12 chr4 4574865 4581016 -179707646 + L1PA7 LINE L1 11 6154 0 229 347 32 0 chr4 4583427 4583522 -179705140 + L1M4 LINE L1 4482 4579 -1567 1830 145 35 0 chr4 4583654 4583944 -179704718 + AluJo SINE Alu 1 300 -12 783 158 30 8 chr4 4584260 4584393 -179704269 + MER68 LTR ERV1 117 252 -310 317 254 70 56 chr4 4584405 4584547 -179704115 + MER68 LTR ERV1 353 496 -66 2201 105 14 0 chr4 4585517 4585803 -179702859 + AluSx SINE Alu 1 290 -22 1398 117 77 55 chr4 4585812 4586016 -179702646 + L1MA8 LINE L1 6011 6224 -67 1889 137 0 56 chr4 4586016 4586337 -179702325 - AluSg SINE Alu -7 303 1 1398 117 77 55 chr4 4586337 4586406 -179702256 + L1MA8 LINE L1 6224 6290 -1 2155 105 0 14 chr4 4586412 4586735 -179701927 + AluY SINE Alu 1 319 0 184 0 0 88 chr4 4587653 4587687 -179700975 + (CAAAAA)n Simple_repeat Simple_repeat 2 32 0 1768 151 34 7 chr4 4588005 4588296 -179700366 - AluJo SINE Alu -13 299 1 300 228 78 5 chr4 4588319 4588408 -179700254 - MIR SINE MIR -68 140 48 1084 168 13 5 chr4 4588588 4588894 -179699768 + MLT1A1 LTR MaLR 1 374 0 1610 93 4 31 chr4 4588986 4589211 -179699451 + AluSc SINE Alu 1 219 -90 972 219 129 4 chr4 4589256 4589535 -179699127 + L1MB8 LINE L1 5859 6172 -6 2378 86 0 3 chr4 4589539 4589843 -179698819 + AluSg SINE Alu 1 303 -7 1016 168 7 0 chr4 4589843 4589998 -179698664 + AluJb SINE Alu 134 289 -23 23 0 0 0 chr4 4589998 4590021 -179698641 + AT_rich Low_complexity Low_complexity 1 23 0 210 288 34 0 chr4 4590035 4590094 -179698568 - L2 LINE L2 -685 2629 2569 217 200 60 0 chr4 4590105 4590155 -179698507 + (TATATG)n Simple_repeat Simple_repeat 6 58 0 1884 112 26 59 chr4 4590156 4590347 -179698315 - MER1B DNA MER1_type -2373 339 143 1700 116 100 107 chr4 4590347 4590778 -179697884 + MSTA LTR MaLR 1 428 0 1884 112 26 59 chr4 4590778 4590867 -179697795 - MER1B DNA MER1_type -2569 143 66 2207 88 0 11 chr4 4590867 4591182 -179697480 - AluY SINE Alu 0 312 1 1884 112 26 59 chr4 4591182 4591202 -179697460 - MER1B DNA MER1_type -2646 66 47 198 191 0 0 chr4 4591216 4591258 -179697404 + (TATATG)n Simple_repeat Simple_repeat 3 44 0 913 236 5 5 chr4 4591567 4591762 -179696900 - MER3 DNA MER1_type 0 209 15 2195 118 0 32 chr4 4592329 4592642 -179696020 + AluSq SINE Alu 1 303 -10 279 266 0 0 chr4 4592747 4592811 -179695851 + MER3 DNA MER1_type 15 78 -131 1879 141 3 46 chr4 4592966 4593129 -179695533 - AluSx SINE Alu -15 297 151 2539 48 0 3 chr4 4593129 4593421 -179695241 - AluY SINE Alu -20 291 1 1879 141 3 46 chr4 4593421 4593563 -179695099 - AluSx SINE Alu -161 151 5 901 299 46 46 chr4 4595360 4595881 -179692781 + ERVL LTR ERVL 4893 5413 -351 2217 128 0 0 chr4 4597321 4597619 -179691043 + AluSg SINE Alu 1 298 -12 403 160 75 11 chr4 4597664 4597758 -179690904 - L1ME4a LINE L1 -1 6120 6021 310 250 177 39 chr4 4597764 4597996 -179690666 - L1ME4a LINE L1 -126 5995 5732 2499 83 3 6 chr4 4598034 4598348 -179690314 + AluSp SINE Alu 1 313 0 2415 99 0 0 chr4 4598470 4598782 -179689880 - AluSx SINE Alu 0 312 1 27 29 0 0 chr4 4599605 4599639 -179689023 + AT_rich Low_complexity Low_complexity 1 34 0 1899 144 6 6 chr4 4600144 4600456 -179688206 - AluSx SINE Alu 0 312 1 2123 118 3 25 chr4 4601648 4601963 -179686699 - AluSg SINE Alu -2 308 1 2060 145 3 0 chr4 4602439 4602743 -179685919 + AluSx SINE Alu 1 305 -7 1984 146 7 10 chr4 4603023 4603331 -179685331 + AluSx SINE Alu 1 307 -5 1479 108 33 21 chr4 4603455 4603696 -179684966 + L1PB3 LINE L1 5911 6154 0 677 190 12 0 chr4 4603707 4603870 -179684792 + GA-rich Low_complexity Low_complexity 4 168 0 1368 194 73 60 chr4 4603922 4604227 -179684435 + L1MB7 LINE L1 5628 5978 -200 2268 79 7 0 chr4 4604227 4604505 -179684157 - AluSx SINE Alu -18 294 15 1368 194 73 60 chr4 4604505 4604709 -179683953 + L1MB7 LINE L1 5978 6178 0 2133 104 49 0 chr4 4604730 4605018 -179683644 + AluSg SINE Alu 1 302 -8 458 236 222 22 chr4 4605170 4605395 -179683267 + L1ME4a LINE L1 5836 6105 -16 527 128 0 13 chr4 4606600 4606678 -179681984 - AluSc SINE Alu -17 292 216 1852 163 27 0 chr4 4606914 4607214 -179681448 + AluJo SINE Alu 1 308 -4 23 0 0 0 chr4 4608392 4608415 -179680247 + AT_rich Low_complexity Low_complexity 1 23 0 1554 159 24 57 chr4 4608437 4608733 -179679929 - AluJb SINE Alu -25 287 2 2361 196 73 14 chr4 4612579 4613177 -179675485 + L1MB3 LINE L1 5548 6176 -7 22 0 0 0 chr4 4613418 4613440 -179675222 + AT_rich Low_complexity Low_complexity 1 22 0 246 206 32 16 chr4 4613692 4613703 -179674959 + AluYb8 SINE Alu 245 254 -54 1792 140 0 0 chr4 4613703 4613953 -179674709 + AluSx SINE Alu 1 250 -62 * 2341 109 0 0 chr4 4613952 4614254 -179674408 - AluSx SINE Alu -10 302 1 246 206 32 16 chr4 4614254 4614305 -179674357 + AluYb8 SINE Alu 555 308 0 24 53 0 0 chr4 4615356 4615394 -179673268 + AT_rich Low_complexity Low_complexity 1 38 0 1921 125 0 58 chr4 4615582 4615895 -179672767 + AluSx SINE Alu 1 295 -17 29 60 0 0 chr4 4616645 4616695 -179671967 + AT_rich Low_complexity Low_complexity 1 50 0 1092 168 59 25 chr4 4618233 4618399 -179670263 - AluJo SINE Alu -19 293 117 180 0 0 0 chr4 4618399 4618419 -179670243 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1092 168 59 25 chr4 4618419 4618454 -179670208 - AluJo SINE Alu -195 117 85 770 223 150 0 chr4 4618545 4618738 -179669924 + MER58A DNA MER1_type 1 222 -2 1434 158 74 37 chr4 4620045 4620342 -179668320 - AluJb SINE Alu -4 308 1 2258 133 18 3 chr4 4621148 4621480 -179667182 - MER1B DNA MER1_type 0 337 1 257 150 0 0 chr4 4621480 4621520 -179667142 - MER1B DNA MER1_type -297 40 1 848 180 51 0 chr4 4621573 4621751 -179666911 - MER53 DNA DNA -2 187 1 917 240 45 0 chr4 4621872 4622072 -179666590 + MER58A DNA MER1_type 5 213 -11 237 286 65 32 chr4 4622121 4622275 -179666387 - HAL1b LINE L1 -437 911 753 314 311 57 0 chr4 4622868 4622974 -179665688 - HAL1 LINE L1 -814 1693 1582 828 224 114 93 chr4 4623699 4624091 -179664571 + L1MC5 LINE L1 7270 7679 -282 1696 190 17 0 chr4 4624091 4624380 -179664282 - AluJb SINE Alu -18 294 1 828 224 114 93 chr4 4624380 4624546 -179664116 + L1MC5 LINE L1 7679 7840 -121 184 216 0 0 chr4 4624841 4624878 -179663784 - MIR SINE MIR -25 237 201 306 206 41 0 chr4 4624894 4624967 -179663695 - Charlie7 DNA MER1_type -2158 454 379 394 294 9 0 chr4 4625282 4625391 -179663271 + L2 LINE L2 3162 3271 -1 3763 109 0 4 chr4 4627530 4628043 -179660619 + MER9 LTR ERVK 1 511 0 2236 128 0 0 chr4 4628306 4628604 -179660058 + AluSx SINE Alu 1 298 -14 2001 257 70 20 chr4 4628950 4629654 -179659008 + L1ME3A LINE L1 5416 6154 -16 517 276 98 91 chr4 4629733 4630439 -179658223 + HAL1 LINE L1 1 711 -1796 2214 114 0 0 chr4 4630455 4630752 -179657910 + AluSx SINE Alu 14 310 -2 969 191 12 0 chr4 4630752 4630920 -179657742 + AluJo/FRAM SINE Alu 135 304 -8 583 228 56 28 chr4 4630978 4631158 -179657504 + HAL1 LINE L1 1178 1362 -1145 934 274 151 47 chr4 4631177 4631773 -179656889 + HAL1 LINE L1 1442 2099 -408 386 198 83 87 chr4 4632333 4632412 -179656250 + HAL1 LINE L1 2263 2341 -166 2265 91 7 0 chr4 4632412 4632721 -179655941 + AluSp SINE Alu 2 312 0 386 198 83 87 chr4 4632721 4632868 -179655794 + HAL1 LINE L1 2341 2491 -16 1607 188 0 33 chr4 4632868 4633172 -179655490 - AluJo SINE Alu -18 294 1 386 198 83 87 chr4 4633172 4633185 -179655477 + HAL1 LINE L1 2491 2503 -4 260 327 103 33 chr4 4633713 4633927 -179654735 - MIR SINE MIR 0 262 34 214 329 24 0 chr4 4635360 4635445 -179653217 - L2 LINE L2 -557 2757 2671 1666 158 59 0 chr4 4635574 4635847 -179652815 - AluJb SINE Alu -23 289 1 417 258 129 80 chr4 4636160 4636447 -179652215 - L2 LINE L2 -8 3305 3005 257 191 0 0 chr4 4636938 4636985 -179651677 + L1MA2 LINE L1 6070 6116 -188 1644 190 37 0 chr4 4637003 4637303 -179651359 - AluJb SINE Alu -1 311 1 2286 101 7 0 chr4 4637306 4637604 -179651058 - AluSx SINE Alu -8 304 5 717 45 0 0 chr4 4637638 4637727 -179650935 + AluS SINE Alu 2 90 -223 626 137 21 0 chr4 4637733 4637828 -179650834 + AluSg/x SINE Alu 193 289 -20 1074 117 12 0 chr4 4637829 4637991 -179650671 + L1MA2 LINE L1 6134 6297 -7 28 29 0 0 chr4 4638001 4638036 -179650626 + AT_rich Low_complexity Low_complexity 1 35 0 2566 62 0 3 chr4 4638410 4638714 -179649948 + AluSp SINE Alu 1 303 -10 21 0 0 0 chr4 4638727 4638748 -179649914 + AT_rich Low_complexity Low_complexity 1 21 0 1942 131 3 3 chr4 4640907 4641190 -179647472 + AluJb SINE Alu 1 283 -29 200 261 15 0 chr4 4641681 4641746 -179646916 + (CA)n Simple_repeat Simple_repeat 1 66 0 1450 158 54 28 chr4 4642664 4642981 -179645681 + L1MC3 LINE L1 7461 7785 0 1030 159 246 10 chr4 4643802 4644111 -179644551 - Charlie5 DNA MER1_type 0 2624 2243 3914 247 58 31 chr4 4644116 4644282 -179644380 - L1MEc LINE L1 -2647 3568 3408 2324 113 0 0 chr4 4644282 4644583 -179644079 - AluSx SINE Alu -8 304 4 3914 247 58 31 chr4 4644583 4644806 -179643856 - L1MEc LINE L1 -2807 3408 3192 1717 198 0 0 chr4 4644806 4645099 -179643563 - AluJo SINE Alu -19 293 1 3914 247 58 31 chr4 4645099 4646062 -179642600 - L1MEc LINE L1 -3023 3192 2179 429 242 129 16 chr4 4646071 4646257 -179642405 - L1MEc LINE L1 -4205 2191 1985 574 156 15 82 chr4 4646257 4646392 -179642270 - MLT1D LTR MaLR -3 502 377 9082 59 7 172 chr4 4646395 4648023 -179640639 + SVA Other Other 28 1386 0 1195 204 59 64 chr4 4648067 4648455 -179640207 - MLT1D LTR MaLR -119 386 1 315 248 74 33 chr4 4648455 4648576 -179640086 - L1MEc LINE L1 -4424 1972 1847 * 2154 251 68 22 chr4 4648570 4649216 -179639446 - L1MEc LINE L1 -5720 676 1 1696 174 17 7 chr4 4649254 4649542 -179639120 + AluJo SINE Alu 1 291 -21 2055 108 7 7 chr4 4649616 4649902 -179638760 + AluSg SINE Alu 1 286 -24 301 274 69 10 chr4 4650013 4650115 -179638547 - L1ME LINE L1 -462 5659 5552 584 205 8 33 chr4 4650210 4650332 -179638330 - MLT1A2 LTR MaLR 0 374 256 2158 148 0 0 chr4 4650795 4651106 -179637556 - AluSq SINE Alu -2 311 1 325 283 56 66 chr4 4651124 4651322 -179637340 - L1ME LINE L1 -1477 4669 4474 213 298 0 18 chr4 4651606 4651663 -179636999 + MER5A DNA MER1_type 131 186 -3 2500 68 0 0 chr4 4652383 4652676 -179635986 + AluY SINE Alu 1 293 -18 283 288 141 18 chr4 4652753 4652916 -179635746 - MIR SINE MIR -29 233 51 984 204 102 32 chr4 4653170 4653454 -179635208 + L1MB3 LINE L1 5879 6182 -1 2271 83 41 0 chr4 4653462 4653752 -179634910 + AluY SINE Alu 1 302 -9 2176 87 49 7 chr4 4653801 4654089 -179634573 + AluSp SINE Alu 3 302 -11 1610 202 10 10 chr4 4655240 4655547 -179633115 - AluJo SINE Alu -5 307 1 307 290 65 0 chr4 4655554 4655661 -179633001 - MIR SINE MIR -117 145 32 427 294 28 28 chr4 4655667 4655844 -179632818 + MER104 DNA Tc2 1 177 -3 2068 104 24 0 chr4 4656503 4656791 -179631871 + AluSx SINE Alu 1 295 -17 940 129 14 0 chr4 4656661 4656800 -179631862 + AluSg/x SINE Alu 162 302 -8 2444 93 0 3 chr4 4656893 4657204 -179631458 - AluY SINE Alu -1 310 1 2239 122 0 3 chr4 4657233 4657529 -179631133 - AluSx SINE Alu -17 295 1 851 146 0 0 chr4 4657606 4657743 -179630919 + AluSg/x SINE Alu 174 310 0 2483 149 99 62 chr4 4657744 4658308 -179630354 - L1MD2 LINE L1 -291 6068 5484 513 0 0 0 chr4 4658348 4658405 -179630257 + (TG)n Simple_repeat Simple_repeat 2 58 0 1555 170 24 35 chr4 4658408 4658697 -179629965 - AluJo SINE Alu -26 286 1 411 267 182 15 chr4 4658748 4659025 -179629637 + L2 LINE L2 2784 3104 -209 252 311 236 20 chr4 4659270 4659418 -179629244 - MER5A DNA MER1_type 0 189 10 390 296 127 55 chr4 4659771 4660024 -179628638 + L1ME4a LINE L1 5840 6110 -11 2482 74 6 3 chr4 4660078 4660389 -179628273 + AluSp SINE Alu 1 312 -1 1238 183 70 4 chr4 4660444 4660717 -179627945 + MER58B DNA MER1_type 43 333 -8 3635 184 37 1 chr4 4660717 4661510 -179627152 + L1M4 LINE L1 4517 5337 -809 2293 126 0 0 chr4 4661541 4661842 -179626820 + AluSq SINE Alu 1 301 -12 955 266 58 35 chr4 4662012 4662410 -179626252 + L2 LINE L2 2503 2909 -405 918 207 5 25 chr4 4662490 4662688 -179625974 + AluJo SINE Alu 112 305 -7 189 191 24 0 chr4 4662693 4662735 -179625927 + L2 LINE L2 3032 3074 -239 1759 154 0 45 chr4 4662740 4662885 -179625777 + AluSx SINE Alu 1 128 -184 2397 67 0 54 chr4 4662885 4663200 -179625462 + AluY SINE Alu 1 298 -13 1759 154 0 45 chr4 4663200 4663340 -179625322 + AluSx SINE Alu 128 273 -39 224 59 29 0 chr4 4663347 4663381 -179625281 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 394 98 16 0 chr4 4663393 4663454 -179625208 + U7 snRNA snRNA 2 63 0 23 0 0 0 chr4 4663457 4663480 -179625182 + AT_rich Low_complexity Low_complexity 1 23 0 693 233 93 23 chr4 4663496 4663711 -179624951 + L2 LINE L2 3084 3313 0 21 57 0 0 chr4 4664130 4664165 -179624497 + AT_rich Low_complexity Low_complexity 1 35 0 2221 119 0 0 chr4 4664218 4664504 -179624158 + AluSg SINE Alu 1 286 -24 2240 109 0 0 chr4 4664750 4665035 -179623627 - AluSx SINE Alu -22 290 6 228 224 13 66 chr4 4665180 4665256 -179623406 - Tigger2 DNA MER2_type -233 2485 2414 183 100 0 0 chr4 4666882 4666912 -179621750 + (CGGGGG)n Simple_repeat Simple_repeat 4 33 0 261 198 0 0 chr4 4666914 4666995 -179621667 + (CGG)n Simple_repeat Simple_repeat 3 83 0 555 16 0 0 chr4 4666995 4667059 -179621603 + (CTG)n Simple_repeat Simple_repeat 1 64 0 28 61 0 0 chr4 4667283 4667332 -179621330 + GC_rich Low_complexity Low_complexity 1 49 0 402 270 0 53 chr4 4667481 4667670 -179620992 + (CGGGG)n Simple_repeat Simple_repeat 1 179 0 197 62 0 31 chr4 4667681 4667713 -179620949 + (CGGGG)n Simple_repeat Simple_repeat 4 34 0 381 239 6 40 chr4 4667748 4667924 -179620738 + (CGGGG)n Simple_repeat Simple_repeat 5 174 0 733 144 24 8 chr4 4668873 4668998 -179619664 + FRAM SINE Alu 28 154 -22 2296 98 10 3 chr4 4669012 4669308 -179619354 + AluSx SINE Alu 6 303 -9 1427 238 121 23 chr4 4669382 4669853 -179618809 + MLT1E LTR MaLR 8 524 -69 2023 156 48 0 chr4 4669949 4670321 -179618341 - MLT1B LTR MaLR 0 390 1 1412 216 20 73 chr4 4671094 4671492 -179617170 - MLT2D LTR ERVL -8 406 30 1125 158 6 0 chr4 4671521 4671686 -179616976 - AluJb SINE Alu -6 306 141 1986 96 75 4 chr4 4671702 4671982 -179616680 - AluSq SINE Alu -13 300 1 510 276 76 0 chr4 4672999 4673184 -179615478 - LTR33 LTR ERVL -20 501 303 581 181 26 9 chr4 4673196 4673312 -179615350 - LTR33 LTR ERVL -356 165 48 328 291 101 0 chr4 4673460 4673608 -179615054 + L1ME3A LINE L1 5789 5951 -219 2394 106 0 0 chr4 4673661 4673972 -179614690 + AluY SINE Alu 1 311 0 1302 274 44 39 chr4 4673991 4674630 -179614032 - L1ME LINE L1 -4816 1266 732 2207 128 3 0 chr4 4674630 4674926 -179613736 + AluSx SINE Alu 2 298 -14 1302 274 44 39 chr4 4674926 4675195 -179613467 - L1ME LINE L1 -5350 732 466 4592 229 99 29 chr4 4675869 4676447 -179612215 - Zaphod DNA AcHobo -5 4026 3490 2185 129 0 3 chr4 4676447 4676741 -179611921 - AluSx SINE Alu -19 293 1 4592 229 99 29 chr4 4676741 4677008 -179611654 - Zaphod DNA AcHobo -541 3490 3243 2005 101 53 63 chr4 4677008 4677386 -179611276 - THE1C LTR MaLR -1 374 1 4592 229 99 29 chr4 4677386 4678051 -179610611 - Zaphod DNA AcHobo -788 3243 2409 2458 93 3 0 chr4 4678073 4678384 -179610278 + AluSx SINE Alu 1 312 0 889 264 134 26 chr4 4678385 4678772 -179609890 - Zaphod DNA AcHobo -3254 777 349 286 286 62 19 chr4 4678804 4678965 -179609697 + L1ME LINE L1 21 188 -6235 4887 241 105 79 chr4 4679494 4680863 -179607799 + L1ME LINE L1 1263 2594 -4347 2364 113 0 6 chr4 4680863 4681174 -179607488 + AluSq SINE Alu 1 309 -4 4887 241 105 79 chr4 4681174 4681627 -179607035 + L1ME LINE L1 2594 3034 -3907 2527 77 0 3 chr4 4681627 4681937 -179606725 + AluY SINE Alu 1 309 -2 4887 241 105 79 chr4 4681937 4682793 -179605869 + L1ME LINE L1 3034 3866 -3075 2179 73 4 11 chr4 4682793 4683094 -179605568 + AluSg SINE Alu 13 311 0 4887 241 105 79 chr4 4683094 4683797 -179604865 + L1ME LINE L1 3866 4549 -2392 2048 141 0 3 chr4 4683797 4684081 -179604581 + AluSx SINE Alu 1 283 -29 522 46 0 0 chr4 4684082 4684147 -179604515 + (GGAA)n Simple_repeat Simple_repeat 1 65 0 4887 241 105 79 chr4 4684147 4684861 -179603801 + L1ME LINE L1 4549 5243 -1698 2182 118 3 22 chr4 4684861 4685176 -179603486 + AluSq SINE Alu 1 309 -4 4887 241 105 79 chr4 4685176 4685505 -179603157 + L1ME LINE L1 5243 5984 -957 246 248 17 94 chr4 4685505 4685622 -179603040 + L1MEc LINE L1 39 146 -6250 342 296 82 25 chr4 4688166 4688409 -179600253 - MLT2E LTR ERVL -338 290 34 2288 87 0 14 chr4 4688716 4689003 -179599659 - AluSx SINE Alu -17 295 13 2153 108 26 3 chr4 4689157 4689463 -179599199 - AluSp SINE Alu 0 313 1 2677 26 0 7 chr4 4689474 4689776 -179598886 - AluY SINE Alu -11 300 1 482 167 67 0 chr4 4690137 4690257 -179598405 - L1PA12 LINE L1 -115 6053 5926 1828 170 7 0 chr4 4690355 4690666 -179597996 - AluJo SINE Alu 0 312 1 242 230 68 14 chr4 4690781 4690855 -179597807 + L1ME LINE L1 6363 6440 -476 2660 173 39 24 chr4 4690876 4691059 -179597603 + L1MB3 LINE L1 5585 5764 -419 1922 165 3 3 chr4 4691059 4691362 -179597300 + AluJb SINE Alu 1 303 -9 2660 173 39 24 chr4 4691362 4691724 -179596938 + L1MB3 LINE L1 5764 6142 -41 2450 86 0 0 chr4 4691724 4692037 -179596625 + AluSq SINE Alu 1 313 0 2660 173 39 24 chr4 4692037 4692080 -179596582 + L1MB3 LINE L1 6142 6183 0 690 299 66 10 chr4 4692080 4692384 -179596278 + L1MC4a LINE L1 4650 4970 -1176 262 169 51 0 chr4 4692405 4692464 -179596198 - HAL1 LINE L1 -420 2087 2026 321 339 81 36 chr4 4692481 4692702 -179595960 + L1MC4a LINE L1 5668 5898 -1910 246 299 56 28 chr4 4694170 4694314 -179594348 + L2 LINE L2 3111 3258 -55 2054 249 107 15 chr4 4694706 4695388 -179593274 + Charlie1 DNA MER1_type 1538 2282 -479 2172 55 0 85 chr4 4695392 4695685 -179592977 + AluY SINE Alu 14 281 -30 227 205 60 48 chr4 4696599 4696682 -179591980 + HAL1 LINE L1 1304 1387 -1120 234 318 139 20 chr4 4699310 4699461 -179589201 + MLT1-int LTR MaLR 719 887 -484 974 246 104 30 chr4 4700024 4700471 -179588191 + MLT1F1 LTR MaLR 2 540 -114 222 208 19 17 chr4 4700760 4700820 -179587842 - MIR3 SINE MIR -52 156 114 180 111 0 0 chr4 4702316 4702343 -179586319 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 444 219 38 19 chr4 4703358 4703463 -179585199 + MER53 DNA DNA 1 107 -82 241 257 0 71 chr4 4703684 4703824 -179584838 + (CCCCAG)n Simple_repeat Simple_repeat 4 133 0 322 267 13 0 chr4 4704500 4704575 -179584087 + L2 LINE L2 3232 3307 -6 207 43 29 100 chr4 4705037 4705107 -179583555 + (TCCC)n Simple_repeat Simple_repeat 2 66 0 292 262 220 6 chr4 4705114 4705282 -179583380 - MER58A DNA MER1_type -20 204 1 301 208 0 31 chr4 4707284 4707414 -179581248 + (CA)n Simple_repeat Simple_repeat 2 127 0 287 289 0 0 chr4 4707437 4707520 -179581142 + (CA)n Simple_repeat Simple_repeat 1 83 0 453 250 2 4 chr4 4707549 4707933 -179580729 + (CA)n Simple_repeat Simple_repeat 1 383 0 329 224 6 0 chr4 4707960 4708116 -179580546 + (CA)n Simple_repeat Simple_repeat 1 157 0 657 301 79 18 chr4 4709227 4709506 -179579156 - L1ME3A LINE L1 -206 5964 5669 239 252 0 0 chr4 4709562 4709623 -179579039 - L1ME3A LINE L1 -790 5356 5296 1994 214 11 15 chr4 4709857 4710395 -179578267 + L1MB3 LINE L1 2916 3451 -2695 825 114 8 0 chr4 4710400 4710523 -179578139 + AluJb SINE Alu 2 125 -187 2137 131 0 0 chr4 4710536 4710848 -179577814 + AluSx SINE Alu 1 312 0 872 165 35 18 chr4 4710849 4711019 -179577643 + L1MB3 LINE L1 3446 3618 -2528 829 142 18 17 chr4 4711022 4711599 -179577063 + GA-rich Low_complexity Low_complexity 1 577 0 7497 168 45 16 chr4 4711604 4714097 -179574565 + L1MB3 LINE L1 3611 6183 0 1910 145 0 3 chr4 4714104 4714408 -179574254 + AluJb SINE Alu 1 303 -9 308 211 84 21 chr4 4714428 4714523 -179574139 - L1ME3A LINE L1 -1479 4667 4567 1284 228 120 83 chr4 4714533 4714634 -179574028 - L1ME3A LINE L1 -1816 4330 4234 1919 164 0 0 chr4 4714634 4714939 -179573723 - AluJb SINE Alu 0 312 8 1284 228 120 83 chr4 4714939 4715544 -179573118 - L1ME3A LINE L1 -1912 4234 3598 789 283 108 34 chr4 4715529 4716003 -179572659 - L1ME3A LINE L1 -2954 3192 2684 * 1718 341 56 17 chr4 4716481 4717567 -179571095 + HERV16 LTR ERVL 1851 2987 -2009 2584 130 34 20 chr4 4717567 4718006 -179570656 + MER65A LTR ERV1 1 445 0 6464 167 58 32 chr4 4718007 4719747 -179568915 + MER65A-int LTR ERV1 6 1905 -2966 1917 164 0 0 chr4 4719747 4720059 -179568603 - AluJo SINE Alu 0 312 1 6464 167 58 32 chr4 4720059 4720694 -179567968 + MER65A-int LTR ERV1 1905 2522 -2349 1422 180 82 96 chr4 4720700 4721425 -179567237 + MER65A-int LTR ERV1 1546 3475 -3123 718 147 156 102 chr4 4721623 4721848 -179566814 + MER65A-int LTR ERV1 3494 3730 -2868 1344 134 48 45 chr4 4721928 4722219 -179566443 + MER65A-int LTR ERV1 3730 4021 -2577 * 2813 175 110 46 chr4 4722202 4722995 -179565667 + MER65A-int LTR ERV1 2805 3546 -2785 2285 86 0 0 chr4 4722995 4723296 -179565366 - AluY SINE Alu -10 301 1 2813 175 110 46 chr4 4723296 4723680 -179564982 + MER65A-int LTR ERV1 3546 5094 -1237 255 158 0 0 chr4 4723663 4723701 -179564961 + MER65A-int LTR ERV1 5337 5374 -957 * 3918 156 94 3 chr4 4723732 4724413 -179564249 + MER65A-int LTR ERV1 3605 4347 -524 663 139 130 0 chr4 4724418 4724533 -179564129 + BC200 scRNA scRNA 5 134 -66 3515 96 20 6 chr4 4724555 4725064 -179563598 + MER65A-int LTR ERV1 4356 4871 0 2488 124 54 28 chr4 4725064 4725492 -179563170 + MER65A LTR ERV1 1 439 -6 1222 254 79 10 chr4 4726622 4727016 -179561646 + L1MC2 LINE L1 5918 6338 -6 317 305 57 14 chr4 4727058 4727199 -179561463 + MIR SINE MIR 102 248 -14 193 228 81 106 chr4 4727753 4727876 -179560786 + MIR SINE MIR 111 230 -32 510 312 3 10 chr4 4728631 4729061 -179559601 + C-rich Low_complexity Low_complexity 1 427 0 456 321 0 39 chr4 4729113 4729370 -179559292 + C-rich Low_complexity Low_complexity 1 246 0 2081 185 40 7 chr4 4730592 4731019 -179557643 + MER65A LTR ERV1 5 445 0 1817 150 7 0 chr4 4731036 4731330 -179557332 - AluJo SINE Alu -15 297 2 2118 104 3 0 chr4 4732173 4732462 -179556200 + AluSp SINE Alu 2 291 -22 258 208 139 10 chr4 4732524 4732625 -179556037 - MIR3 SINE MIR -54 154 41 3637 198 58 24 chr4 4732684 4733523 -179555139 - L1MB3 LINE L1 -15 6168 5299 805 226 28 9 chr4 4733623 4733840 -179554822 - L1MB3 LINE L1 -811 5335 5115 370 328 42 0 chr4 4733886 4734005 -179554657 + L2 LINE L2 3148 3271 -1 335 243 83 48 chr4 4734127 4734378 -179554284 - LTR33A LTR ERVL 0 773 262 2056 102 0 7 chr4 4734406 4734724 -179553938 - AluSx SINE Alu 0 316 1 471 172 0 50 chr4 4734727 4734826 -179553836 - AluJo/FRAM SINE Alu -17 295 202 250 191 0 0 chr4 4734826 4734868 -179553794 - Alu SINE Alu -260 42 1 25 0 0 0 chr4 4735844 4735869 -179552793 + AT_rich Low_complexity Low_complexity 1 25 0 212 196 0 39 chr4 4735924 4735975 -179552687 + GA-rich Low_complexity Low_complexity 4 52 0 622 254 96 44 chr4 4735994 4736379 -179552283 + L1ME3A LINE L1 3634 4038 -2108 522 306 150 22 chr4 4736475 4737021 -179551641 + L1ME3A LINE L1 4379 4994 -1152 616 92 0 23 chr4 4737096 4737183 -179551479 + AluSx SINE Alu 3 87 -226 2323 50 7 3 chr4 4737183 4737480 -179551182 + AluY SINE Alu 1 298 -13 1688 79 0 5 chr4 4737480 4737694 -179550968 + AluSx SINE Alu 73 287 -25 336 233 12 12 chr4 4737929 4738015 -179550647 + L1ME3A LINE L1 5401 5486 -2322 252 275 90 36 chr4 4738091 4738258 -179550404 + L1ME3A LINE L1 5781 5956 -214 30 0 0 0 chr4 4739078 4739108 -179549554 + AT_rich Low_complexity Low_complexity 1 30 0 239 250 45 11 chr4 4739217 4739305 -179549357 - L1ME4a LINE L1 -100 6021 5931 846 253 203 9 chr4 4739448 4739788 -179548874 + MLT1J LTR MaLR 2 407 -104 326 164 33 0 chr4 4739931 4739992 -179548670 - L2 LINE L2 -1 3312 3250 934 171 96 21 chr4 4741898 4742085 -179546577 - MSTC LTR MaLR -1 427 227 226 188 21 115 chr4 4742111 4742134 -179546528 - L1MA4A LINE L1 -4 6299 6277 9640 166 46 10 chr4 4742134 4743990 -179544672 - L1PB4 LINE L1 -6 6150 4175 1618 171 21 3 chr4 4743990 4744276 -179544386 + AluJo SINE Alu 1 291 -21 9640 166 46 10 chr4 4744276 4745014 -179543648 - L1PB4 LINE L1 -1981 4175 3465 1025 117 25 77 chr4 4745014 4745210 -179543452 - MSTC LTR MaLR -242 186 1 255 254 164 26 chr4 4745508 4745697 -179542965 + L1MC4a LINE L1 5254 5468 -2340 306 0 0 0 chr4 4746623 4746657 -179542005 + (TC)n Simple_repeat Simple_repeat 1 34 0 207 0 0 0 chr4 4746656 4746679 -179541983 + (CA)n Simple_repeat Simple_repeat 1 23 0 * 424 315 91 20 chr4 4746679 4747073 -179541589 + L1MC4a LINE L1 5533 5954 -1854 706 254 24 15 chr4 4747646 4747851 -179540811 - Charlie1 DNA MER1_type 0 2761 2555 185 0 0 39 chr4 4747920 4747946 -179540716 + (TTAA)n Simple_repeat Simple_repeat 4 28 0 277 253 77 0 chr4 4748983 4749074 -179539588 + LTR50 LTR ERVL 1 98 -697 385 217 24 21 chr4 4749329 4749454 -179539208 + LTR50 LTR ERVL 654 792 -3 1739 129 3 58 chr4 4750783 4751092 -179537570 + AluJo SINE Alu 1 292 -20 810 154 18 24 chr4 4751215 4751384 -179537278 - AluJo SINE Alu -9 303 136 225 156 302 2 chr4 4754763 4754826 -179533836 + MER5C DNA MER1_type 4 85 -104 2212 204 77 6 chr4 4755200 4755721 -179532941 - MER68 LTR ERV1 -2 560 3 2209 77 0 7 chr4 4755825 4756133 -179532529 + AluY SINE Alu 1 306 0 85 35 0 0 chr4 4756446 4756559 -179532103 + AT_rich Low_complexity Low_complexity 1 113 0 571 272 107 35 chr4 4756741 4757031 -179531631 + MLT1D LTR MaLR 195 505 0 653 150 0 35 chr4 4757456 4757569 -179531093 - FRAM SINE Alu -9 167 59 630 179 9 0 chr4 4758145 4758251 -179530411 - AluJo SINE Alu -170 142 36 202 293 9 57 chr4 4758421 4758527 -179530135 - MER5A DNA MER1_type -71 118 18 * 257 324 54 0 chr4 4758518 4758592 -179530070 - MIR3 SINE MIR -40 168 91 1470 161 53 5 chr4 4758681 4759011 -179529651 - Tigger4(Zombi) DNA MER2_type 0 2731 1 507 266 13 38 chr4 4759489 4759647 -179529015 - MIR SINE MIR -72 190 37 899 246 104 30 chr4 4765546 4765993 -179522669 + MLT1F1 LTR MaLR 2 540 -114 291 192 0 0 chr4 4767827 4767900 -179520762 + (TG)n Simple_repeat Simple_repeat 1 73 0 4275 118 12 17 chr4 4768275 4768461 -179520201 + MER41B LTR ERV1 1 186 -449 1796 130 92 0 chr4 4768461 4768745 -179519917 + AluSx SINE Alu 1 310 -2 4275 118 12 17 chr4 4768745 4769196 -179519466 + MER41B LTR ERV1 186 635 0 735 108 0 0 chr4 4769536 4769638 -179519024 + U6 snRNA snRNA 1 102 -5 1811 119 79 0 chr4 4769785 4770062 -179518600 - AluSx SINE Alu -13 299 1 3970 158 99 38 chr4 4770096 4770907 -179517755 + MER21B LTR ERV1 3 862 -1 1884 228 50 14 chr4 4770917 4771435 -179517227 - MER72 LTR ERV1 -174 548 12 2916 115 18 18 chr4 4771549 4771983 -179516679 - MER57B LTR ERV1 0 434 1 1207 72 63 31 chr4 4771983 4772195 -179516467 - MER57B-int LTR ERV1 0 7537 7279 748 86 23 31 chr4 4772195 4772323 -179516339 - LTR54B LTR ERV1 -367 131 5 14293 97 72 47 chr4 4772323 4772364 -179516298 - MER57B-int LTR ERV1 -387 7150 7112 6322 113 17 42 chr4 4772364 4772465 -179516197 + LTR13 LTR ERVK 1 103 -851 2515 46 0 0 chr4 4772465 4772784 -179515878 + AluY SINE Alu 1 319 0 6322 113 17 42 chr4 4772784 4773659 -179515003 + LTR13 LTR ERVK 103 954 0 14293 97 72 47 chr4 4773659 4774577 -179514085 - MER57B-int LTR ERV1 -425 7112 6219 2244 123 0 0 chr4 4774577 4774877 -179513785 + AluSx SINE Alu 1 300 -12 14293 97 72 47 chr4 4774877 4775342 -179513320 - MER57B-int LTR ERV1 -1318 6219 5767 399 41 0 0 chr4 4775342 4775391 -179513271 + (CA)n Simple_repeat Simple_repeat 1 49 0 596 96 48 0 chr4 4775391 4775474 -179513188 - AluSg/x SINE Alu -18 292 206 14293 97 72 47 chr4 4775474 4776407 -179512255 - MER57B-int LTR ERV1 -1769 5768 4646 407 91 0 30 chr4 4776407 4776466 -179512196 - MER57B-int LTR ERV1 -3194 4343 4284 459 0 0 0 chr4 4776466 4776517 -179512145 + (TG)n Simple_repeat Simple_repeat 2 52 0 2216 99 7 0 chr4 4776517 4776800 -179511862 - AluSp SINE Alu -28 285 1 4942 125 61 36 chr4 4776815 4777687 -179510975 + MER57-int LTR ERV1 1478 2371 -5166 849 153 27 0 chr4 4777686 4777836 -179510826 + MER57-int LTR ERV1 2476 2629 -4908 * 1672 82 55 8 chr4 4777832 4778089 -179510573 + MER57-int LTR ERV1 2781 3049 -4488 3512 92 31 81 chr4 4778094 4778144 -179510518 + MER57-int LTR ERV1 3248 3299 -4517 2157 110 3 23 chr4 4778144 4778444 -179510218 + AluSx SINE Alu 1 294 -18 3512 92 31 81 chr4 4778444 4778689 -179509973 + MER57-int LTR ERV1 3299 3555 -4261 2231 135 0 0 chr4 4778689 4779000 -179509662 + AluSx SINE Alu 2 312 0 3512 92 31 81 chr4 4779000 4779192 -179509470 + MER57-int LTR ERV1 3555 3755 -4061 2335 96 7 3 chr4 4779192 4779495 -179509167 - AluSq SINE Alu -9 304 1 3512 92 31 81 chr4 4779495 4779814 -179508848 + MER57-int LTR ERV1 3755 4143 -3673 2239 64 21 0 chr4 4779812 4780142 -179508520 + MER57-int LTR ERV1 3914 4250 -3287 * 2063 107 0 0 chr4 4780142 4780414 -179508248 - AluSg SINE Alu -2 308 37 812 251 116 28 chr4 4780514 4780869 -179507793 - MLT1J LTR MaLR -109 402 17 2115 156 51 0 chr4 4780880 4781251 -179507411 + MLT1B LTR MaLR 1 390 0 1287 239 134 19 chr4 4781347 4781811 -179506851 - MLT1E LTR MaLR -69 524 8 2152 99 20 3 chr4 4781884 4782177 -179506485 - AluSx SINE Alu -9 303 6 734 146 41 8 chr4 4782191 4782314 -179506348 - FRAM SINE Alu -22 154 28 452 234 6 34 chr4 4783256 4783431 -179505231 + (CCCCG)n Simple_repeat Simple_repeat 5 174 0 314 209 18 42 chr4 4783466 4783642 -179505020 + (CCCCG)n Simple_repeat Simple_repeat 1 171 0 28 61 0 0 chr4 4783840 4783889 -179504773 + GC_rich Low_complexity Low_complexity 1 49 0 555 16 0 0 chr4 4784109 4784173 -179504489 + (CAG)n Simple_repeat Simple_repeat 1 64 0 378 181 0 0 chr4 4784175 4784280 -179504382 + (CCG)n Simple_repeat Simple_repeat 2 106 0 23 33 0 0 chr4 4786074 4786104 -179502558 + AT_rich Low_complexity Low_complexity 1 30 0 2233 109 0 0 chr4 4786111 4786396 -179502266 + AluSx SINE Alu 6 290 -22 2170 119 3 0 chr4 4786638 4786923 -179501739 - AluSg SINE Alu -24 286 1 21 57 0 0 chr4 4786970 4787005 -179501657 + AT_rich Low_complexity Low_complexity 1 35 0 740 233 93 23 chr4 4787412 4787627 -179501035 - L2 LINE L2 0 3313 3084 23 0 0 0 chr4 4787643 4787666 -179500996 + AT_rich Low_complexity Low_complexity 1 23 0 418 98 16 0 chr4 4787669 4787730 -179500932 - U7 snRNA snRNA 0 63 2 1934 151 3 40 chr4 4787743 4787921 -179500741 - AluSx SINE Alu 0 312 150 2381 67 0 54 chr4 4787921 4788236 -179500426 - AluY SINE Alu -13 298 1 1934 151 3 40 chr4 4788236 4788381 -179500281 - AluSx SINE Alu -162 150 1 203 191 24 0 chr4 4788386 4788428 -179500234 - L2 LINE L2 -239 3074 3032 890 171 6 47 chr4 4788433 4788603 -179500059 - FRAM SINE Alu -13 163 1 977 273 88 33 chr4 4788604 4789100 -179499562 - L2 LINE L2 -277 3036 2503 2290 126 0 0 chr4 4789270 4789571 -179499091 - AluSq SINE Alu -12 301 1 3533 187 31 0 chr4 4789626 4790392 -179498270 - L1M4 LINE L1 -840 5306 4517 1203 181 78 4 chr4 4790392 4790663 -179497999 - MER58B DNA MER1_type -8 333 43 2476 74 6 3 chr4 4790718 4791029 -179497633 - AluSp SINE Alu -1 312 1 353 307 132 52 chr4 4791082 4791333 -179497329 - L1ME4a LINE L1 -11 6110 5840 282 304 236 20 chr4 4791683 4791831 -179496831 + MER5A DNA MER1_type 10 189 0 476 267 182 15 chr4 4792076 4792353 -179496309 - L2 LINE L2 -209 3104 2784 1505 185 25 25 chr4 4792402 4792688 -179495974 + AluJo SINE Alu 1 286 -26 495 0 0 0 chr4 4792693 4792748 -179495914 + (CA)n Simple_repeat Simple_repeat 2 56 0 2308 148 112 59 chr4 4792788 4793344 -179495318 + L1MD2 LINE L1 5484 6068 -291 805 147 7 0 chr4 4793345 4793481 -179495181 - AluSg/x SINE Alu 0 310 174 2161 123 3 3 chr4 4793558 4793851 -179494811 + AluSx SINE Alu 1 293 -19 2464 93 0 0 chr4 4793880 4794190 -179494472 + AluY SINE Alu 1 310 -1 2002 118 27 0 chr4 4794282 4794578 -179494084 - AluSx SINE Alu -8 304 1 396 294 28 28 chr4 4795234 4795411 -179493251 - MER104 DNA MER2_type -3 177 1 286 260 106 10 chr4 4795417 4795521 -179493141 + MIR SINE MIR 32 145 -117 1469 205 26 10 chr4 4795528 4795830 -179492832 + AluJo SINE Alu 1 307 -5 2057 98 60 0 chr4 4796967 4797252 -179491410 - AluSp SINE Alu -9 304 3 2107 92 55 0 chr4 4797294 4797587 -179491075 - AluY SINE Alu -2 309 1 874 212 106 32 chr4 4797595 4797878 -179490784 - L1MB3 LINE L1 -1 6182 5879 338 297 137 17 chr4 4798127 4798302 -179490360 + MIR SINE MIR 51 246 -16 2514 79 0 0 chr4 4798357 4798660 -179490002 - AluY SINE Alu -8 303 1 317 297 19 26 chr4 4798660 4798815 -179489847 - L1MEd LINE L1 -4846 1464 1311 421 282 89 81 chr4 4799277 4799970 -179488692 - L1MEd LINE L1 -4864 1255 580 2269 92 0 0 chr4 4800220 4800504 -179488158 + AluSc SINE Alu 5 288 -21 2044 196 56 0 chr4 4800746 4801139 -179487523 + MER47B DNA MER2_type 2 416 -2 1853 90 98 22 chr4 4801172 4801449 -179487213 + AluSg SINE Alu 6 303 -7 761 278 86 30 chr4 4801592 4802183 -179486479 - L1M4 LINE L1 -2202 3944 3321 2304 121 0 0 chr4 4802290 4802587 -179486075 + AluSg SINE Alu 1 297 -13 593 228 152 0 chr4 4802636 4802794 -179485868 - MER21B LTR ERV1 -677 186 5 635 179 0 34 chr4 4802853 4802970 -179485692 + FLAM_C SINE Alu 7 119 -24 1218 168 5 37 chr4 4804354 4804568 -179484094 + AluJo SINE Alu 1 207 -105 248 83 28 0 chr4 4804624 4804660 -179484002 + MER4A LTR ERV1 261 297 -367 1099 413 72 7 chr4 4804669 4804826 -179483836 - AluSx SINE Alu 0 312 167 1595 156 0 4 chr4 4804826 4805063 -179483599 - AluSx SINE Alu -76 236 1 1099 413 72 7 chr4 4805063 4805198 -179483464 - AluSx SINE Alu -145 167 1 842 189 12 0 chr4 4805198 4805367 -179483295 + L1M3 LINE L1 5625 5795 -388 248 141 188 0 chr4 4805372 4805436 -179483226 + L1MB3 LINE L1 6101 6176 -7 2349 148 69 29 chr4 4805440 4805920 -179482742 + L1MB8 LINE L1 5679 6177 -1 2427 86 3 0 chr4 4806203 4806507 -179482155 + AluSc SINE Alu 1 305 -4 371 357 30 0 chr4 4806608 4806807 -179481855 + L1MC/D LINE L1 5437 5641 -2167 301 381 81 6 chr4 4806824 4806849 -179481813 - L1MC4a LINE L1 -1901 5907 5885 2287 72 48 3 chr4 4806849 4807140 -179481522 - AluY SINE Alu -7 304 1 301 381 81 6 chr4 4807140 4807287 -179481375 - L1MC4a LINE L1 -1923 5885 5722 720 200 8 0 chr4 4807307 4807432 -179481230 - FLAM_A SINE Alu -7 126 1 2255 77 42 3 chr4 4807439 4807726 -179480936 - AluY SINE Alu -13 298 1 925 151 0 0 chr4 4807913 4808039 -179480623 + FLAM_C SINE Alu 4 129 -14 693 246 111 63 chr4 4808639 4808752 -179479910 - L2 LINE L2 -4 3309 3203 1876 122 48 56 chr4 4808752 4809130 -179479532 + THE1C LTR MaLR 1 375 0 693 246 111 63 chr4 4809130 4809350 -179479312 - L2 LINE L2 -110 3203 2960 214 281 112 0 chr4 4809837 4809926 -179478736 + L2 LINE L2 2315 2413 -901 209 333 16 0 chr4 4809927 4809990 -179478672 - L2 LINE L2 0 3272 3209 8239 150 71 11 chr4 4810613 4812114 -179476548 + MER52A LTR ERV1 90 1755 0 221 329 12 0 chr4 4812658 4812743 -179475919 - L2 LINE L2 -2 3270 3185 1277 178 15 118 chr4 4812968 4813145 -179475517 - AluJb SINE Alu -5 297 103 2366 64 4 4 chr4 4813145 4813426 -179475236 - AluSp SINE Alu -32 281 1 2109 116 0 44 chr4 4813430 4813611 -179475051 - AluSx SINE Alu -7 305 142 2348 87 17 3 chr4 4813611 4813909 -179474753 - AluY SINE Alu -9 302 1 2109 116 0 44 chr4 4813909 4814046 -179474616 - AluSx SINE Alu -170 142 1 1277 178 15 118 chr4 4814046 4814194 -179474468 - AluJb SINE Alu -202 100 1 344 257 0 18 chr4 4814837 4814946 -179473716 + L1 LINE L1 5174 5280 -866 1047 264 41 32 chr4 4814969 4815381 -179473281 + MLT1J1 LTR MaLR 68 446 0 2119 127 6 13 chr4 4815918 4816233 -179472429 + AluSp SINE Alu 1 313 0 490 133 20 10 chr4 4816318 4816416 -179472246 - LTR54 LTR ERV1 -2 508 410 1250 171 46 0 chr4 4816416 4816633 -179472029 + AluJo SINE Alu 86 312 0 216 158 0 0 chr4 4816642 4816680 -179471982 + GA-rich Low_complexity Low_complexity 1 38 0 1347 136 62 9 chr4 4816680 4817039 -179471623 - LTR54 LTR ERV1 -94 413 1 2413 77 0 0 chr4 4817548 4817834 -179470828 - AluSc SINE Alu -23 286 1 353 209 97 75 chr4 4817996 4818065 -179470597 + MLT1J2 LTR MaLR 59 125 -325 579 150 18 9 chr4 4818065 4818178 -179470484 + L1PB2 LINE L1 6037 6150 -1 353 209 97 75 chr4 4818178 4818242 -179470420 + MLT1J2 LTR MaLR 125 195 -255 332 233 125 33 chr4 4818261 4818381 -179470281 + L2 LINE L2 3141 3271 -1 198 309 21 32 chr4 4818379 4818473 -179470189 - MIR SINE MIR -157 105 13 * 192 40 0 0 chr4 4818473 4818498 -179470164 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 699 222 50 20 chr4 4818498 4818696 -179469966 - L2 LINE L2 -13 3300 3097 731 167 24 0 chr4 4818711 4818837 -179469825 + FLAM_A SINE Alu 1 129 -4 1145 305 206 7 chr4 4818907 4819752 -179468910 - L2 LINE L2 -408 2906 1894 2006 158 0 0 chr4 4819822 4820113 -179468549 + AluJb SINE Alu 1 291 -21 2023 188 34 36 chr4 4820779 4821247 -179467415 + MLT1C LTR MaLR 1 467 0 249 232 0 18 chr4 4821369 4821425 -179467237 - L2 LINE L2 0 3313 3259 2297 84 0 10 chr4 4821887 4822183 -179466479 + AluY SINE Alu 1 293 -18 2381 88 0 0 chr4 4822185 4822479 -179466183 - AluSc SINE Alu -15 294 1 1681 145 16 46 chr4 4822876 4823180 -179465482 + AluJo SINE Alu 1 295 -17 2543 80 3 3 chr4 4823180 4823514 -179465148 + AluSp SINE Alu 1 334 0 539 172 0 0 chr4 4823518 4823605 -179465057 + AluS SINE Alu 2 88 -225 372 367 50 10 chr4 4824130 4824329 -179464333 + L2 LINE L2 3107 3313 0 285 191 0 16 chr4 4824373 4824436 -179464226 + LTR67 LTR ERVL 457 518 -39 2271 77 7 24 chr4 4824766 4825063 -179463599 + AluSp SINE Alu 1 292 -21 2265 113 10 3 chr4 4825157 4825459 -179463203 + AluSx SINE Alu 1 304 -8 2026 164 28 3 chr4 4825590 4825944 -179462718 - MLT1A1 LTR MaLR -2 363 1 2563 50 3 0 chr4 4826425 4826724 -179461938 - AluY SINE Alu -11 300 1 573 142 31 63 chr4 4827159 4827286 -179461376 - FLAM_A SINE Alu -10 132 10 3350 80 120 35 chr4 4827594 4828142 -179460520 - LTR61 LTR ERV1 0 595 1 244 196 0 0 chr4 4828930 4828976 -179459686 + (CCG)n Simple_repeat Simple_repeat 3 48 0 26 50 0 0 chr4 4829186 4829226 -179459436 + GC_rich Low_complexity Low_complexity 1 40 0 21 57 0 0 chr4 4829577 4829612 -179459050 + GC_rich Low_complexity Low_complexity 1 35 0 22 35 0 0 chr4 4830173 4830202 -179458460 + AT_rich Low_complexity Low_complexity 1 29 0 280 273 13 0 chr4 4830228 4830305 -179458357 - MIR SINE MIR -129 133 56 225 237 0 0 chr4 4830548 4830607 -179458055 + (TTGGGG)n Simple_repeat Simple_repeat 5 63 0 264 333 69 7 chr4 4841051 4841195 -179447467 + MIR SINE MIR 108 260 -2 30639 110 13 60 chr4 4841286 4843454 -179445208 + L1PA7 LINE L1 9 2279 -3875 2427 75 0 3 chr4 4843454 4843749 -179444913 + AluY SINE Alu 1 294 -17 30639 110 13 60 chr4 4843749 4845745 -179442917 + L1PA7 LINE L1 2279 3745 -2409 2051 119 36 23 chr4 4845745 4846048 -179442614 + AluSc SINE Alu 3 309 0 30639 110 13 60 chr4 4846048 4848349 -179440313 + L1PA7 LINE L1 3745 6154 0 2334 85 0 0 chr4 4848388 4848716 -179439946 + AluSc SINE Alu 1 328 0 323 236 181 31 chr4 4849137 4849264 -179439398 + MIR SINE MIR 117 262 0 343 279 67 77 chr4 4849977 4850275 -179438387 - L1MC5 LINE L1 -151 7810 7516 312 294 80 73 chr4 4850279 4850554 -179438108 + HAL1 LINE L1 1914 2190 -317 270 167 56 11 chr4 4850554 4850644 -179438018 + (TAA)n Simple_repeat Simple_repeat 2 95 0 270 248 191 0 chr4 4850645 4850750 -179437912 - MIR SINE MIR -2 260 136 2311 104 0 7 chr4 4851019 4851318 -179437344 + AluSx SINE Alu 2 298 -14 2569 71 0 3 chr4 4851669 4851979 -179436683 - AluY SINE Alu -2 309 1 2333 98 0 0 chr4 4853990 4854285 -179434377 + AluSg SINE Alu 1 295 -15 188 225 197 14 chr4 4854910 4854981 -179433681 - MIR SINE MIR -89 119 36 999 181 166 30 chr4 4856905 4857170 -179431492 - AluJo SINE Alu 0 302 2 2135 101 10 7 chr4 4858168 4858464 -179430198 - AluSx SINE Alu -15 297 1 23 33 0 0 chr4 4858671 4858701 -179429961 + AT_rich Low_complexity Low_complexity 1 30 0 2273 94 7 0 chr4 4858999 4859298 -179429364 - AluSx SINE Alu -11 301 1 713 187 0 22 chr4 4859298 4859432 -179429230 - AluJo SINE Alu -171 141 11 209 186 0 0 chr4 4860209 4860252 -179428410 + CT-rich Low_complexity Low_complexity 1 43 0 1820 169 3 3 chr4 4861620 4861921 -179426741 + AluJb SINE Alu 1 301 -11 2238 93 0 0 chr4 4862369 4862660 -179426002 + AluSx SINE Alu 1 291 -21 182 149 43 21 chr4 4864252 4864299 -179424363 + MIR SINE MIR 173 220 -42 2271 98 0 0 chr4 4866417 4866712 -179421950 + AluSp SINE Alu 1 295 -18 552 268 91 0 chr4 4867274 4867494 -179421168 + Charlie5 DNA MER1_type 2361 2600 -12 246 305 73 24 chr4 4870437 4870519 -179418143 + L2 LINE L2 3179 3264 -49 1695 152 11 14 chr4 4872331 4872608 -179416054 + AluJo SINE Alu 16 291 -21 1963 75 101 0 chr4 4872608 4872875 -179415787 - AluSp SINE Alu -19 294 1 3341 143 118 33 chr4 4874649 4875286 -179413376 - LTR8 LTR ERV1 0 691 1 253 280 40 0 chr4 4875437 4875512 -179413150 + MLT2F LTR ERVL 54 131 -532 329 289 47 0 chr4 4875706 4875834 -179412828 + MLT2F LTR ERVL 421 554 -109 324 199 5 117 chr4 4876359 4876555 -179412107 + G-rich Low_complexity Low_complexity 3 176 0 558 91 26 0 chr4 4976555 4976632 -179312030 + AluJ/FRAM SINE Alu 224 302 -10 2123 99 7 30 chr4 4976634 4976769 -179311893 + AluSq SINE Alu 2 139 -174 2292 61 0 51 chr4 4976769 4977080 -179311582 + AluY SINE Alu 1 295 -16 2123 99 7 30 chr4 4977080 4977247 -179311415 + AluSq SINE Alu 139 297 -16 21 82 0 0 chr4 5033159 5033208 -179255454 + AT_rich Low_complexity Low_complexity 1 49 0 284 233 0 14 chr4 5033248 5033321 -179255341 + MIR SINE MIR 66 137 -125 315 239 53 80 chr4 5033475 5033588 -179255074 - L2 LINE L2 -11 3302 3193 1669 157 3 25 chr4 5034500 5034786 -179253876 + AluJb SINE Alu 1 280 -32 303 93 0 0 chr4 5034789 5034832 -179253830 + (GGGA)n Simple_repeat Simple_repeat 4 46 0 2268 88 20 0 chr4 5034836 5035131 -179253531 - AluSp SINE Alu -12 301 1 869 114 0 0 chr4 5035279 5035393 -179253269 - AluSp/q SINE Alu -25 288 175 296 272 60 87 chr4 5035396 5035835 -179252827 - L1M4 LINE L1 -2397 3749 3292 1723 151 28 14 chr4 5035863 5036148 -179252514 - AluJb SINE Alu -21 291 3 237 220 93 34 chr4 5036157 5036275 -179252387 - L1MC5 LINE L1 -30 7931 7807 358 245 101 52 chr4 5036284 5036611 -179252051 - L1M4 LINE L1 -2866 3280 2938 2062 130 13 3 chr4 5036642 5036943 -179251719 + AluSx SINE Alu 3 306 -6 2149 123 3 0 chr4 5036945 5037245 -179251417 + AluSx SINE Alu 1 301 -11 257 247 234 7 chr4 5037370 5037524 -179251138 - MER5A DNA MER1_type 0 189 1 1772 163 50 0 chr4 5038456 5038738 -179249924 - AluJb SINE Alu -16 296 1 2396 78 0 3 chr4 5040498 5040792 -179247870 - AluSc SINE Alu -14 295 3 2326 103 0 7 chr4 5040796 5041098 -179247564 - AluSx SINE Alu -12 300 1 22 0 0 0 chr4 5041102 5041124 -179247538 + AT_rich Low_complexity Low_complexity 1 22 0 260 222 0 16 chr4 5041656 5041719 -179246943 + (TATATG)n Simple_repeat Simple_repeat 2 63 0 573 285 88 55 chr4 5041736 5041979 -179246683 + L1M4 LINE L1 2658 2891 -3255 1915 117 81 0 chr4 5041979 5042252 -179246410 - AluSx SINE Alu -17 295 1 573 285 88 55 chr4 5042252 5042279 -179246383 + L1M4 LINE L1 2891 2916 -3230 2316 97 0 0 chr4 5042279 5042601 -179246061 + AluSx SINE Alu 1 312 0 573 285 88 55 chr4 5042601 5042767 -179245895 + L1M4 LINE L1 2916 3075 -3071 2575 59 0 3 chr4 5042767 5043071 -179245591 + AluY SINE Alu 1 303 -8 573 285 88 55 chr4 5043071 5043114 -179245548 + L1M4 LINE L1 3075 3115 -3031 1744 183 0 13 chr4 5043114 5043426 -179245236 + AluJb SINE Alu 1 308 -4 573 285 88 55 chr4 5043426 5043446 -179245216 + L1M4 LINE L1 3110 3178 -2963 2388 100 0 3 chr4 5043446 5043757 -179244905 + AluSg SINE Alu 1 310 0 624 112 0 84 chr4 5043767 5043910 -179244752 + AluSq/x SINE Alu 3 133 -180 2199 136 3 0 chr4 5043912 5044222 -179244440 + AluJb SINE Alu 1 311 -1 1558 243 68 56 chr4 5044234 5044999 -179243663 - L1M4 LINE L1 -1057 5089 4316 1918 145 13 7 chr4 5045358 5045662 -179243000 - AluSx SINE Alu -4 308 3 251 83 0 0 chr4 5045677 5045713 -179242949 - Charlie1 DNA MER1_type -399 2362 2327 705 182 0 7 chr4 5045717 5045865 -179242797 - L1MB3 LINE L1 -1 6182 6036 1047 164 30 0 chr4 5045998 5046163 -179242499 + AluJo SINE Alu 120 289 -23 359 285 99 90 chr4 5046316 5046748 -179241914 - L2 LINE L2 -3 3310 2875 758 248 65 70 chr4 5046964 5047187 -179241475 + L2 LINE L2 1942 2165 -1149 1386 76 168 0 chr4 5047187 5047384 -179241278 + MER30 DNA MER1_type 1 230 0 758 248 65 70 chr4 5047384 5047439 -179241223 + L2 LINE L2 2165 2219 -1095 592 250 65 6 chr4 5047439 5047607 -179241055 + MER5B DNA MER1_type 1 178 0 758 248 65 70 chr4 5047607 5047755 -179240907 + L2 LINE L2 2219 2367 -947 401 139 97 14 chr4 5047851 5047923 -179240739 + AluJ/FLAM SINE Alu 5 82 -220 529 293 33 53 chr4 5048003 5048303 -179240359 + L2 LINE L2 2848 3141 -172 643 229 204 10 chr4 5048308 5048509 -179240153 + MIR SINE MIR 21 260 -2 292 303 115 0 chr4 5048528 5048650 -179240012 + L2 LINE L2 3178 3313 0 272 143 41 0 chr4 5049605 5049654 -179239008 - Alu SINE Alu -8 294 244 309 252 96 35 chr4 5050243 5050358 -179238304 + MIR SINE MIR 112 233 -29 627 226 15 0 chr4 5050380 5050513 -179238149 - FLAM_C SINE Alu -7 136 2 593 274 137 5 chr4 5050743 5050947 -179237715 + MIR SINE MIR 32 262 0 1621 172 11 0 chr4 5051603 5051864 -179236798 - AluJo SINE Alu -20 292 29 2355 102 0 3 chr4 5052009 5052312 -179236350 + AluSg SINE Alu 1 302 -8 2239 128 3 0 chr4 5052330 5052636 -179236026 + AluSx SINE Alu 1 307 -5 546 251 88 42 chr4 5052689 5053019 -179235643 + L1MEc LINE L1 1287 1631 -4765 752 130 9 17 chr4 5053033 5053148 -179235514 + AluJb SINE Alu 5 118 -194 22 0 0 0 chr4 5053148 5053170 -179235492 + AT_rich Low_complexity Low_complexity 1 22 0 305 100 0 0 chr4 5053188 5053228 -179235434 - AluSp SINE Alu -124 179 140 1817 161 10 3 chr4 5053231 5053522 -179235140 + AluJb SINE Alu 11 303 -9 322 190 0 0 chr4 5053526 5053584 -179235078 + FAM SINE Alu 120 177 -2 725 267 91 64 chr4 5053951 5053970 -179234692 + L1MEc LINE L1 2298 2315 -3900 1656 206 88 30 chr4 5053970 5054445 -179234217 + MLT1D LTR MaLR 3 505 0 725 267 91 64 chr4 5054445 5054865 -179233797 + L1MEc LINE L1 2315 2722 -3493 213 65 0 0 chr4 5054865 5054896 -179233766 + (CTTG)n Simple_repeat Simple_repeat 2 32 0 2110 120 0 7 chr4 5054897 5055180 -179233482 - AluSx SINE Alu -31 281 1 725 267 91 64 chr4 5055180 5055316 -179233346 + L1MEc LINE L1 2722 2853 -3362 2215 115 0 0 chr4 5055316 5055612 -179233050 + AluSq SINE Alu 1 296 -17 725 267 91 64 chr4 5055612 5055816 -179232846 + L1MEc LINE L1 2853 3102 -3113 2155 107 10 3 chr4 5055822 5056112 -179232550 + AluSx SINE Alu 10 301 -11 1230 182 5 0 chr4 5056287 5056485 -179232177 + AluJb SINE Alu 93 291 -21 1437 228 100 20 chr4 5056536 5056935 -179231727 - MLT1C LTR MaLR 0 467 37 563 298 76 58 chr4 5056965 5057196 -179231466 - MER57-int LTR ERV1 -1796 2851 2607 2544 50 0 13 chr4 5057196 5057498 -179231164 + AluSc SINE Alu 1 298 -11 563 298 76 58 chr4 5057498 5057699 -179230963 - MER57-int LTR ERV1 -2040 2607 2411 2451 81 0 0 chr4 5057744 5058041 -179230621 + AluSg1 SINE Alu 1 297 -12 621 247 98 60 chr4 5058051 5058156 -179230506 - MER57-int LTR ERV1 -7238 299 199 2457 63 0 3 chr4 5058156 5058456 -179230206 - AluY SINE Alu -12 299 1 621 247 98 60 chr4 5058456 5058585 -179230077 - MER57-int LTR ERV1 -7338 199 56 863 102 0 0 chr4 5058695 5058810 -179229852 + AluJb SINE Alu 172 280 -32 231 36 0 0 chr4 5058810 5058838 -179229824 + (CAAT)n Simple_repeat Simple_repeat 2 29 0 1733 173 3 10 chr4 5058841 5059147 -179229515 + AluJo SINE Alu 1 304 -8 1564 197 62 75 chr4 5059153 5059477 -179229185 + MSTD LTR MaLR 1 321 -75 2277 90 3 0 chr4 5059477 5059787 -179228875 + AluY SINE Alu 1 311 0 1564 197 62 75 chr4 5059787 5059863 -179228799 + MSTD LTR MaLR 321 396 0 2238 96 0 0 chr4 5060013 5060306 -179228356 + AluSx SINE Alu 1 293 -19 2972 233 170 101 chr4 5060678 5060710 -179227952 - HAL1 LINE L1 0 2507 2479 1860 168 23 13 chr4 5060710 5061019 -179227643 - AluJo SINE Alu 0 312 1 2972 233 170 101 chr4 5061019 5061848 -179226814 - HAL1 LINE L1 -28 2479 1709 2102 118 0 3 chr4 5061848 5062144 -179226518 - AluSq SINE Alu -18 295 1 2972 233 170 101 chr4 5062144 5062296 -179226366 - HAL1 LINE L1 -798 1709 1569 2173 101 34 0 chr4 5062296 5062592 -179226070 - AluSx SINE Alu -6 306 1 2972 233 170 101 chr4 5062592 5062749 -179225913 - HAL1 LINE L1 -938 1569 1424 854 146 0 0 chr4 5062749 5062879 -179225783 - FLAM_A SINE Alu -5 137 8 2972 233 170 101 chr4 5062879 5063680 -179224982 - HAL1 LINE L1 -1083 1424 258 231 239 28 28 chr4 5065189 5065260 -179223402 - L2 LINE L2 0 3272 3202 248 286 32 56 chr4 5065296 5065422 -179223240 + L2 LINE L2 2369 2491 -823 1829 204 34 50 chr4 5065425 5065930 -179222732 - MLT1D LTR MaLR 0 505 9 267 348 27 27 chr4 5065943 5066055 -179222607 + L2 LINE L2 2502 2613 -701 618 256 133 5 chr4 5066055 5066321 -179222341 + L2 LINE L2 2726 3029 -284 1828 117 10 52 chr4 5066544 5066851 -179221811 + AluJb SINE Alu 1 294 -18 2331 64 7 7 chr4 5066855 5067152 -179221510 + AluY SINE Alu 1 297 -14 1561 87 5 5 chr4 5067811 5068018 -179220644 + AluSg/x SINE Alu 82 288 -24 211 221 29 0 chr4 5068107 5068175 -179220487 + (CGGGG)n Simple_repeat Simple_repeat 4 73 0 1014 87 25 6 chr4 5068962 5069123 -179219539 - pTR5 LTR ERV1 -2046 392 229 * 2850 116 112 71 chr4 5069100 5070154 -179218508 + pTR5 LTR ERV1 970 2437 -1 344 339 23 18 chr4 5070224 5070395 -179218267 + L2 LINE L2 2848 3019 -294 248 330 62 0 chr4 5070863 5070975 -179217687 - L2 LINE L2 -296 2976 2858 264 334 85 5 chr4 5070980 5071180 -179217482 - L2 LINE L2 -257 3015 2804 1246 221 202 12 chr4 5071480 5071954 -179216708 - MER77 LTR ERV1 -15 547 1 2111 127 13 0 chr4 5071991 5072290 -179216372 + AluSx SINE Alu 1 303 -9 213 39 0 0 chr4 5072302 5072328 -179216334 + (GGGA)n Simple_repeat Simple_repeat 3 28 0 2311 89 0 0 chr4 5072493 5072796 -179215866 - AluSx SINE Alu -9 303 1 658 237 74 86 chr4 5073026 5073085 -179215577 + MER46C DNA MER2_type 2 60 -278 1769 167 13 7 chr4 5073085 5073390 -179215272 - AluJo SINE Alu -5 307 1 658 237 74 86 chr4 5073390 5073566 -179215096 + MER46C DNA MER2_type 60 237 -101 2592 222 38 11 chr4 5073566 5074092 -179214570 - MLT1F LTR MaLR -2 540 1 658 237 74 86 chr4 5074092 5074146 -179214516 + MER46C DNA MER2_type 237 290 -48 2106 93 3 7 chr4 5074146 5074436 -179214226 + AluSx SINE Alu 1 289 -23 270 81 0 0 chr4 5074437 5074474 -179214188 + (CAATA)n Simple_repeat Simple_repeat 1 37 0 658 237 74 86 chr4 5074474 5074517 -179214145 + MER46C DNA MER2_type 289 334 -4 234 253 46 58 chr4 5074531 5074618 -179214044 - MIR SINE MIR -67 141 56 210 301 49 77 chr4 5074689 5074832 -179213830 - MIR SINE MIR -24 238 100 2287 72 3 10 chr4 5075288 5075594 -179213068 + AluSq SINE Alu 9 312 -1 225 199 21 28 chr4 5075962 5076103 -179212559 + (CGGGG)n Simple_repeat Simple_repeat 5 144 0 22 35 0 0 chr4 5076144 5076173 -179212489 + GC_rich Low_complexity Low_complexity 1 29 0 24 32 0 0 chr4 5076178 5076209 -179212453 + GC_rich Low_complexity Low_complexity 1 31 0 1785 158 10 3 chr4 5077484 5077782 -179210880 + AluJb SINE Alu 1 300 -12 2426 54 3 0 chr4 5077795 5078092 -179210570 + AluY SINE Alu 3 300 -11 507 321 124 57 chr4 5078361 5078626 -179210036 - L1ME4a LINE L1 -8 6113 5831 1961 142 0 16 chr4 5079034 5079350 -179209312 - AluJo SINE Alu 0 312 2 1534 162 0 87 chr4 5079407 5079740 -179208922 - AluJo SINE Alu -2 310 7 2182 103 3 3 chr4 5080341 5080684 -179207978 - AluSg SINE Alu 0 343 1 1895 97 19 11 chr4 5080732 5080999 -179207663 - AluJo SINE Alu -23 289 21 343 187 1 0 chr4 5081001 5081074 -179207588 + MLT1C LTR MaLR 305 372 -2 575 118 0 32 chr4 5081736 5081829 -179206833 + FLAM_A SINE Alu 45 134 -8 432 186 58 0 chr4 5081856 5081942 -179206720 - AluJb SINE Alu -21 291 201 * 765 218 0 0 chr4 5081934 5082067 -179206595 + AluJo/FRAM SINE Alu 153 285 -27 356 0 23 0 chr4 5082067 5082111 -179206551 + (TAA)n Simple_repeat Simple_repeat 2 46 0 801 172 60 0 chr4 5082406 5082540 -179206122 + AluJb SINE Alu 1 142 -170 183 274 24 113 chr4 5082559 5082683 -179205979 + L2 LINE L2 3015 3127 -145 228 67 0 0 chr4 5083987 5084017 -179204645 + (TG)n Simple_repeat Simple_repeat 1 30 0 357 356 0 6 chr4 5084670 5084847 -179203815 + (CA)n Simple_repeat Simple_repeat 1 176 0 180 339 76 8 chr4 5084941 5085059 -179203603 - MIR SINE MIR -34 228 103 216 179 0 0 chr4 5085175 5085214 -179203448 - MIR SINE MIR -157 105 67 1278 269 75 18 chr4 5089740 5090182 -179198480 + MLT1C LTR MaLR 1 467 0 214 329 13 0 chr4 5091581 5091657 -179197005 + (GGGTG)n Simple_repeat Simple_repeat 4 80 0 194 231 0 0 chr4 5092131 5092170 -179196492 + MIR SINE MIR 109 147 -61 273 169 70 28 chr4 5094640 5094711 -179193951 + MIR SINE MIR 48 121 -87 314 356 0 11 chr4 5095507 5095597 -179193065 + L1MC4 LINE L1 6615 6703 -1339 * 378 260 0 13 chr4 5095517 5095618 -179193044 - L1MCa LINE L1 -1339 6983 1996 367 356 0 0 chr4 5095599 5095689 -179192973 + L1MC4 LINE L1 6614 6703 -1339 * 403 311 0 0 chr4 5095681 5095771 -179192891 - L1MC4 LINE L1 -1339 6703 6614 420 20 0 0 chr4 5095773 5095822 -179192840 + (CA)n Simple_repeat Simple_repeat 2 50 0 2032 113 18 0 chr4 5095826 5096110 -179192552 - AluSx SINE Alu -23 289 1 1966 132 7 0 chr4 5096112 5096401 -179192261 - AluSx SINE Alu -21 291 1 246 216 68 27 chr4 5102041 5102115 -179186547 - MIR SINE MIR -97 165 89 483 87 87 0 chr4 5102743 5102812 -179185850 + AluSg SINE Alu 2 76 -233 344 358 37 10 chr4 5103133 5103306 -179185356 - MIR SINE MIR -61 147 7 233 154 0 22 chr4 5104186 5104248 -179184414 - MIR SINE MIR -114 148 90 286 191 0 43 chr4 5105167 5105261 -179183401 + (CCCCG)n Simple_repeat Simple_repeat 2 91 0 571 302 208 12 chr4 5108261 5108779 -179179883 + L2 LINE L2 2414 3033 -280 1575 127 89 55 chr4 5108866 5109157 -179179505 - AluJb SINE Alu -7 305 5 1648 98 9 0 chr4 5112041 5112265 -179176397 + AluSg SINE Alu 84 309 -1 961 184 107 8 chr4 5112274 5112518 -179176144 - MER57A LTR ERV1 -4 399 132 270 284 0 0 chr4 5112626 5112700 -179175962 - MER57A LTR ERV1 -288 115 42 888 301 17 23 chr4 5112712 5113064 -179175598 - MER57-int LTR ERV1 -394 7143 6794 2169 101 10 0 chr4 5113150 5113456 -179175206 + AluSx SINE Alu 1 309 -3 1201 131 0 5 chr4 5113467 5113666 -179174996 + L1PBa LINE L1 1 198 -6665 * 9929 95 47 16 chr4 5113662 5115814 -179172848 + L1PBa LINE L1 995 3404 -3458 507 141 10 20 chr4 5115814 5115913 -179172749 + MER4A LTR ERV1 1 98 -566 * 1552 131 3 83 chr4 5115908 5116289 -179172373 + MER4A LTR ERV1 256 664 0 4579 131 86 78 chr4 5116292 5116947 -179171715 + MER4A-int LTR ERV1 1 650 -4365 351 0 0 0 chr4 5116947 5116986 -179171676 + (CA)n Simple_repeat Simple_repeat 1 39 0 4579 131 86 78 chr4 5116986 5117076 -179171586 + MER4A-int LTR ERV1 650 738 -4277 1902 81 0 0 chr4 5117076 5117312 -179171350 - AluSx SINE Alu -76 236 1 4579 131 86 78 chr4 5117312 5117732 -179170930 + MER4A-int LTR ERV1 738 1154 -3861 2365 97 0 0 chr4 5117732 5118041 -179170621 - AluY SINE Alu -2 309 1 4579 131 86 78 chr4 5118041 5118121 -179170541 + MER4A-int LTR ERV1 1154 721 -4294 2129 130 0 3 chr4 5118121 5118421 -179170241 - AluSx SINE Alu -13 299 1 4579 131 86 78 chr4 5118421 5118487 -179170175 + MER4A-int LTR ERV1 720 784 -4231 1599 69 15 0 chr4 5118513 5118716 -179169946 + AluSq SINE Alu 1 206 -107 528 128 0 11 chr4 5118727 5118821 -179169841 + MER4-int LTR ERV1 3961 4053 -2545 2015 192 39 94 chr4 5118821 5118915 -179169747 + LTR9 LTR ERV1 1 99 -513 2211 128 0 0 chr4 5118915 5119227 -179169435 + AluSq SINE Alu 1 312 -1 2015 192 39 94 chr4 5119227 5119768 -179168894 + LTR9 LTR ERV1 99 601 -11 4442 77 42 32 chr4 5119771 5120204 -179168458 + MER4-int LTR ERV1 4050 4496 -2102 2122 138 0 6 chr4 5120204 5120516 -179168146 + AluSx SINE Alu 3 312 0 4442 77 42 32 chr4 5120516 5120837 -179167825 + MER4-int LTR ERV1 4496 4812 -1786 2362 93 0 0 chr4 5120837 5121148 -179167514 + AluY SINE Alu 1 311 0 2210 120 3 0 chr4 5121353 5121653 -179167009 + AluSx SINE Alu 1 301 -11 1641 154 50 0 chr4 5121693 5121973 -179166689 + AluJo SINE Alu 8 301 -11 2291 100 0 0 chr4 5122015 5122316 -179166346 - AluSx SINE Alu -11 301 1 488 252 8 15 chr4 5122512 5122643 -179166019 - MER57-int LTR ERV1 -1347 6190 6061 851 270 34 78 chr4 5122669 5122762 -179165900 + L1ME3A LINE L1 5665 5761 -409 1282 97 126 14 chr4 5122762 5122969 -179165693 + MER30 DNA MER1_type 1 230 0 851 270 34 78 chr4 5122969 5123404 -179165258 + L1ME3A LINE L1 5761 6170 0 1806 114 64 0 chr4 5124185 5124466 -179164196 + AluSx SINE Alu 1 299 -13 255 239 0 5 chr4 5124642 5124707 -179163955 + MIR3 SINE MIR 92 156 -52 325 176 54 0 chr4 5124944 5125018 -179163644 - MIR SINE MIR -87 121 44 203 271 0 0 chr4 5125014 5125062 -179163600 + MIR SINE MIR 108 155 -107 * 2228 100 0 3 chr4 5125587 5125896 -179162766 + AluSx SINE Alu 1 308 -4 250 320 82 0 chr4 5126989 5127086 -179161576 + MIR SINE MIR 2 106 -156 247 264 0 0 chr4 5127848 5127901 -179160761 + MIR SINE MIR 94 146 -62 811 165 0 8 chr4 5128074 5128207 -179160455 + FLAM_C SINE Alu 1 132 -1 212 290 0 0 chr4 5128281 5128343 -179160319 + G-rich Low_complexity Low_complexity 3 64 0 2125 119 0 3 chr4 5130850 5131152 -179157510 + AluSx SINE Alu 1 301 -11 195 42 0 0 chr4 5133294 5133318 -179155344 + (GGGA)n Simple_repeat Simple_repeat 4 27 0 183 80 0 0 chr4 5133439 5133464 -179155198 + (GGATG)n Simple_repeat Simple_repeat 3 27 0 273 302 0 0 chr4 5134344 5134430 -179154232 + (CA)n Simple_repeat Simple_repeat 1 86 0 231 282 0 0 chr4 5134441 5134590 -179154072 + (CA)n Simple_repeat Simple_repeat 2 150 0 409 306 0 16 chr4 5134662 5134845 -179153817 + (CA)n Simple_repeat Simple_repeat 1 180 0 338 173 29 29 chr4 5134858 5135031 -179153631 + (CA)n Simple_repeat Simple_repeat 2 174 0 205 199 28 28 chr4 5135102 5135243 -179153419 + (CA)n Simple_repeat Simple_repeat 2 142 0 271 178 30 30 chr4 5135878 5136013 -179152649 + (TG)n Simple_repeat Simple_repeat 2 136 0 260 274 9 19 chr4 5136026 5136132 -179152530 + (TG)n Simple_repeat Simple_repeat 2 106 0 1037 127 13 6 chr4 5138953 5139111 -179149551 + AluSg/x SINE Alu 135 293 -17 1258 139 42 14 chr4 5139118 5139322 -179149340 + AluJb SINE Alu 87 299 -13 2161 114 10 0 chr4 5139322 5139629 -179149033 + AluSx SINE Alu 1 310 -2 1258 139 42 14 chr4 5139629 5139640 -179149022 + AluJb SINE Alu 299 308 -4 1718 140 66 14 chr4 5139642 5139928 -179148734 + AluJb SINE Alu 1 301 -11 1247 153 0 23 chr4 5142047 5142263 -179146399 + AluJo SINE Alu 87 297 -15 1403 166 50 13 chr4 5142264 5142565 -179146097 + AluJo SINE Alu 1 312 0 44 75 0 0 chr4 5143165 5143258 -179145404 + GC_rich Low_complexity Low_complexity 1 93 0 22 35 0 0 chr4 5143332 5143361 -179145301 + GC_rich Low_complexity Low_complexity 1 29 0 3074 188 57 7 chr4 5144487 5145143 -179143519 + L1M4 LINE L1 3573 4272 -1874 2068 82 53 4 chr4 5145143 5145424 -179143238 + AluSq SINE Alu 1 295 -18 3074 188 57 7 chr4 5145424 5145507 -179143155 + L1M4 LINE L1 4272 4349 -1797 2200 106 0 3 chr4 5145511 5145812 -179142850 + AluSg SINE Alu 11 310 0 2178 128 3 0 chr4 5145822 5146128 -179142534 + AluSx SINE Alu 1 307 -5 445 282 75 33 chr4 5146159 5146521 -179142141 + L1MEc LINE L1 1265 1641 -4755 764 143 8 17 chr4 5146521 5146640 -179142022 + AluJb SINE Alu 1 118 -194 23 0 0 0 chr4 5146640 5146663 -179141999 + AT_rich Low_complexity Low_complexity 1 23 0 280 100 0 0 chr4 5146681 5146721 -179141941 - AluSp SINE Alu -124 179 140 1780 161 10 3 chr4 5146724 5147015 -179141647 + AluJb SINE Alu 11 303 -9 290 190 0 0 chr4 5147019 5147077 -179141585 + FAM SINE Alu 120 177 -2 365 383 83 31 chr4 5147086 5147412 -179141250 + L1MEc LINE L1 1918 2260 -4136 492 309 87 35 chr4 5147422 5147463 -179141199 + L1MEc LINE L1 2272 2309 -3906 1755 206 88 30 chr4 5147463 5147938 -179140724 + MLT1D LTR MaLR 3 505 0 492 309 87 35 chr4 5147938 5148358 -179140304 + L1MEc LINE L1 2309 2706 -3509 180 97 0 0 chr4 5148358 5148389 -179140273 + (CTTG)n Simple_repeat Simple_repeat 2 32 0 2037 120 0 7 chr4 5148390 5148673 -179139989 - AluSx SINE Alu -31 281 1 492 309 87 35 chr4 5148673 5148809 -179139853 + L1MEc LINE L1 2706 2833 -3382 2159 128 0 0 chr4 5148809 5149121 -179139541 + AluSq SINE Alu 1 312 -1 492 309 87 35 chr4 5149121 5149309 -179139353 + L1MEc LINE L1 2833 3102 -3113 2080 107 10 3 chr4 5149315 5149605 -179139057 + AluSx SINE Alu 10 301 -11 1129 165 17 48 chr4 5149788 5150018 -179138644 + AluJo SINE Alu 82 304 -8 1404 123 0 5 chr4 5150186 5150574 -179138088 + AluSg/x SINE Alu 102 488 0 2330 70 20 0 chr4 5150577 5150875 -179137787 + AluSp SINE Alu 1 304 -9 272 247 34 22 chr4 5151395 5151484 -179137178 - MIR SINE MIR -105 157 68 822 210 13 6 chr4 5151492 5151649 -179137013 + FRAM SINE Alu 1 150 -26 1983 170 29 52 chr4 5151649 5151843 -179136819 - L1MB7 LINE L1 -57 6127 5930 2113 104 6 41 chr4 5151843 5151988 -179136674 + AluSx SINE Alu 1 150 -162 2487 45 0 0 chr4 5151988 5152280 -179136382 + AluY SINE Alu 1 292 -19 2113 104 6 41 chr4 5152280 5152450 -179136212 + AluSx SINE Alu 150 305 -7 1983 170 29 52 chr4 5152450 5152737 -179135925 - L1MB7 LINE L1 -254 5930 5657 245 196 216 21 chr4 5153465 5153562 -179135100 - MIR SINE MIR 0 262 147 417 313 89 0 chr4 5153583 5153762 -179134900 + L1MC/D LINE L1 5505 5699 -422 404 301 43 0 chr4 5153773 5153936 -179134726 + L1MC5 LINE L1 5567 5736 -2072 1395 221 3 33 chr4 5153936 5154239 -179134423 + AluJo SINE Alu 1 294 -18 2222 105 7 0 chr4 5154486 5154781 -179133881 - AluSx SINE Alu -15 297 1 1582 150 6 27 chr4 5154795 5155151 -179133511 + MER4A LTR ERV1 257 663 -1 1873 108 75 0 chr4 5155290 5155568 -179133094 - AluSq SINE Alu -14 299 1 2421 70 0 6 chr4 5155568 5155879 -179132783 - AluY SINE Alu -1 310 1 600 210 148 31 chr4 5155879 5156041 -179132621 - AluJb SINE Alu -11 301 121 670 241 47 4 chr4 5156041 5156277 -179132385 + L1MC5 LINE L1 6985 7230 -731 588 244 189 13 chr4 5156324 5156706 -179131956 + L1MC5 LINE L1 7304 7752 -209 2425 52 0 0 chr4 5157344 5157633 -179131029 + AluSc SINE Alu 1 289 -20 180 218 36 0 chr4 5157701 5157756 -179130906 + L2 LINE L2 2950 3006 -266 297 255 21 7 chr4 5158532 5158677 -179129985 + (CCG)n Simple_repeat Simple_repeat 3 149 0 426 234 32 0 chr4 5159768 5159862 -179128800 + L1MB3 LINE L1 5392 5488 -686 696 191 28 7 chr4 5159862 5160003 -179128659 + BC200 scRNA scRNA 2 145 -55 2917 156 125 6 chr4 5160035 5160289 -179128373 + L1MB3 LINE L1 5478 5700 -483 2048 113 13 27 chr4 5160289 5160589 -179128073 - AluJo SINE Alu -3 309 14 2917 156 125 6 chr4 5160589 5160964 -179127698 + L1MB3 LINE L1 5700 6182 -1 235 83 0 0 chr4 5160968 5161004 -179127658 + Charlie1 DNA MER1_type 2327 2362 -399 1949 145 13 7 chr4 5161019 5161323 -179127339 + AluSx SINE Alu 3 308 -4 425 291 193 64 chr4 5161335 5161692 -179126970 + L1ME LINE L1 1893 2295 -4101 1829 237 88 50 chr4 5161692 5162460 -179126202 + L1ME LINE L1 4395 5133 -1098 2260 132 3 0 chr4 5162460 5162771 -179125891 - AluJb SINE Alu 0 312 1 1829 237 88 50 chr4 5162771 5162857 -179125805 + L1ME LINE L1 5133 5214 -1017 1600 187 17 27 chr4 5162857 5163151 -179125511 + AluJo SINE Alu 7 297 -15 1829 237 88 50 chr4 5163151 5163257 -179125405 + L1ME LINE L1 5214 5315 -916 1848 151 20 7 chr4 5163257 5163555 -179125107 + AluJb SINE Alu 11 312 0 1829 237 88 50 chr4 5163555 5163798 -179124864 + L1ME LINE L1 5315 5645 -586 918 139 0 21 chr4 5163850 5163994 -179124668 - AluJb SINE Alu -171 141 1 1699 143 3 44 chr4 5164093 5164430 -179124232 + AluSx SINE Alu 1 325 0 1966 145 10 19 chr4 5164459 5164770 -179123892 - AluJo SINE Alu 0 312 5 307 269 111 0 chr4 5164861 5164969 -179123693 - L2 LINE L2 -4 3309 3190 282 341 22 37 chr4 5165090 5165225 -179123437 - L3 LINE CR1 -22 1555 1423 340 305 130 11 chr4 5165313 5165490 -179123172 - L3 LINE CR1 -175 1402 1205 382 259 111 44 chr4 5165506 5165641 -179123021 + MIR SINE MIR 4 147 -115 2135 116 23 13 chr4 5165852 5166155 -179122507 - AluSx SINE Alu -6 306 1 885 153 0 29 chr4 5166182 5166319 -179122343 - FLAM_C SINE Alu 0 133 1 2244 99 3 7 chr4 5166614 5166917 -179121745 + AluY SINE Alu 1 302 -9 524 297 80 42 chr4 5166917 5167106 -179121556 - L1ME LINE L1 -696 5468 5288 2181 114 17 0 chr4 5167106 5167405 -179121257 - AluSx SINE Alu -8 304 1 524 297 80 42 chr4 5167405 5167485 -179121177 - L1ME LINE L1 -876 5288 5212 2035 131 10 10 chr4 5167485 5167782 -179120880 - AluSx SINE Alu -15 297 1 524 297 80 42 chr4 5167782 5168334 -179120328 - L1ME LINE L1 -952 5212 4615 2044 124 3 7 chr4 5168604 5168924 -179119738 + AluSx SINE Alu 1 319 0 1852 132 0 62 chr4 5168946 5169270 -179119392 + AluSx SINE Alu 1 305 0 388 260 149 22 chr4 5170643 5170824 -179117838 - L2 LINE L2 -1 3312 3109 2592 44 0 3 chr4 5171415 5171712 -179116950 + AluY SINE Alu 1 296 -15 188 323 127 61 chr4 5171829 5172340 -179116322 - L2 LINE L2 -1903 1411 867 741 172 112 0 chr4 5172835 5172969 -179115693 + FAM SINE Alu 1 149 -36 250 218 119 0 chr4 5173122 5173223 -179115439 + L1ME4a LINE L1 2929 3041 -3105 23 33 0 0 chr4 5173270 5173300 -179115362 + AT_rich Low_complexity Low_complexity 1 30 0 2458 82 0 0 chr4 5173354 5173659 -179115003 + AluY SINE Alu 1 305 -6 671 188 0 8 chr4 5173674 5173802 -179114860 + FRAM SINE Alu 49 175 -1 377 275 25 0 chr4 5173812 5173932 -179114730 + L1ME4a LINE L1 3850 3972 -2174 * 530 191 143 74 chr4 5173931 5174162 -179114500 + L1MC5 LINE L1 6907 7153 -808 2088 134 3 7 chr4 5174163 5174470 -179114192 + AluSx SINE Alu 1 306 -6 636 251 129 8 chr4 5175523 5175778 -179112884 + L1ME4a LINE L1 5488 5773 -348 443 208 135 79 chr4 5175894 5175946 -179112716 + L1ME4a LINE L1 5933 5981 -140 2427 99 0 3 chr4 5175946 5176258 -179112404 + AluSx SINE Alu 1 311 -1 443 208 135 79 chr4 5176258 5176383 -179112279 + L1ME4a LINE L1 5981 6120 -1 2727 48 0 0 chr4 5176551 5176862 -179111800 + AluY SINE Alu 1 311 0 1646 133 0 4 chr4 5177310 5177543 -179111119 + AluSx SINE Alu 1 232 -80 1244 99 0 0 chr4 5177543 5177695 -179110967 + AluSg/x SINE Alu 141 292 -20 293 340 30 10 chr4 5177882 5177982 -179110680 - L2 LINE L2 -32 3240 3139 577 269 159 28 chr4 5178166 5178530 -179110132 + L2 LINE L2 661 1072 -2242 848 161 0 0 chr4 5178558 5178682 -179109980 - FRAM SINE Alu -52 124 1 382 205 60 0 chr4 5178701 5178784 -179109878 + L2 LINE L2 3199 3286 -27 916 312 107 48 chr4 5178859 5179349 -179109313 + L2 LINE L2 2432 2962 -351 1814 132 70 0 chr4 5179349 5179622 -179109040 - AluJb SINE Alu -20 292 1 916 312 107 48 chr4 5179622 5179725 -179108937 + L2 LINE L2 2962 3058 -255 358 213 96 0 chr4 5179821 5179915 -179108747 + L1ME3 LINE L1 6053 6155 -7 219 304 101 0 chr4 5179939 5180018 -179108644 + L2 LINE L2 3215 3301 -12 2338 96 0 10 chr4 5180306 5180473 -179108189 - AluSx SINE Alu -12 300 136 2447 64 0 10 chr4 5180473 5180771 -179107891 - AluY SINE Alu -16 295 1 2338 96 0 10 chr4 5180771 5180906 -179107756 - AluSx SINE Alu -176 136 1 1596 184 0 7 chr4 5182100 5182377 -179106285 - AluJb SINE Alu -33 279 5 495 219 219 14 chr4 5182380 5182526 -179106136 - MER5A DNA MER1_type -3 186 11 2404 79 7 0 chr4 5182698 5183001 -179105661 - AluSx SINE Alu -7 305 1 1756 167 0 20 chr4 5183092 5183385 -179105277 - AluJo SINE Alu -12 300 14 1839 174 7 0 chr4 5184035 5184329 -179104333 + AluSx SINE Alu 2 297 -15 32 26 0 0 chr4 5184418 5184457 -179104205 + AT_rich Low_complexity Low_complexity 1 39 0 1640 183 7 14 chr4 5184466 5184761 -179103901 + AluJb SINE Alu 1 293 -19 492 215 51 67 chr4 5185177 5185372 -179103290 + L2 LINE L2 2550 2741 -573 485 155 21 70 chr4 5185380 5185522 -179103140 + L1MC5 LINE L1 7540 7674 -287 271 314 105 12 chr4 5185537 5185709 -179102953 + L1MC5 LINE L1 7720 7907 -54 22 35 0 0 chr4 5185856 5185885 -179102777 + AT_rich Low_complexity Low_complexity 1 29 0 2395 81 0 10 chr4 5186055 5186363 -179102299 + AluY SINE Alu 1 305 -6 2395 161 64 7 chr4 5187737 5188177 -179100485 + MLT1C LTR MaLR 1 465 -2 181 286 0 0 chr4 5188350 5188392 -179100270 + L2 LINE L2 3221 3262 -10 268 302 30 124 chr4 5188426 5188724 -179099938 + L2 LINE L2 2991 3260 -12 215 343 14 0 chr4 5189432 5189505 -179099157 - MIR SINE MIR -169 93 20 231 356 20 10 chr4 5189770 5189871 -179098791 - MIR SINE MIR -148 114 13 1890 150 3 3 chr4 5190233 5190520 -179098142 - AluJb SINE Alu -8 304 18 345 202 167 0 chr4 5190676 5190760 -179097902 + L2 LINE L2 3175 3272 0 2083 117 7 29 chr4 5190850 5191158 -179097504 + AluSx SINE Alu 1 301 -11 27 0 0 0 chr4 5191482 5191509 -179097153 + AT_rich Low_complexity Low_complexity 1 27 0 21 49 0 49 chr4 5192365 5192426 -179096236 + AT_rich Low_complexity Low_complexity 1 58 0 283 198 20 0 chr4 5192431 5192508 -179096154 + FLAM SINE Alu 67 131 -2 2028 98 11 18 chr4 5192885 5193195 -179095467 - AluSx SINE Alu 0 308 1 214 316 42 71 chr4 5193404 5193458 -179095204 + MIR SINE MIR 100 154 -108 778 155 0 0 chr4 5193458 5193574 -179095088 + FLAM_A SINE Alu 1 116 -17 227 29 57 0 chr4 5193577 5193612 -179095050 + (CAAAA)n Simple_repeat Simple_repeat 2 38 0 214 316 42 71 chr4 5193612 5193721 -179094941 + MIR SINE MIR 156 262 0 1603 163 21 52 chr4 5193976 5194265 -179094397 + AluJo SINE Alu 10 289 -23 527 285 99 90 chr4 5194418 5194850 -179093812 - L2 LINE L2 -3 3310 2875 1052 248 49 75 chr4 5195046 5195290 -179093372 + L2 LINE L2 1928 2177 -1137 1362 76 167 5 chr4 5195290 5195488 -179093174 + MER30 DNA MER1_type 1 230 0 1052 248 49 75 chr4 5195488 5195543 -179093119 + L2 LINE L2 2177 2232 -1082 611 250 65 6 chr4 5195543 5195711 -179092951 + MER5B DNA MER1_type 1 178 0 1052 248 49 75 chr4 5195711 5195862 -179092800 + L2 LINE L2 2232 2367 -947 440 141 99 0 chr4 5195958 5196029 -179092633 + AluJ/FLAM SINE Alu 5 82 -230 631 295 52 42 chr4 5196029 5196409 -179092253 + L2 LINE L2 2748 3141 -172 725 229 204 10 chr4 5196414 5196615 -179092047 + MIR SINE MIR 21 260 -2 335 303 115 0 chr4 5196634 5196756 -179091906 + L2 LINE L2 3178 3313 0 258 143 41 0 chr4 5197711 5197760 -179090902 - Alu SINE Alu -8 294 244 361 262 111 32 chr4 5198349 5198475 -179090187 + MIR SINE MIR 112 247 -15 663 218 15 0 chr4 5198486 5198619 -179090043 - FLAM_C SINE Alu -7 136 2 690 270 137 5 chr4 5198849 5199053 -179089609 + MIR SINE MIR 32 262 0 204 357 70 49 chr4 5199232 5199375 -179089287 + L2 LINE L2 3167 3312 -1 210 311 175 0 chr4 5199397 5199500 -179089162 - MIR3 SINE MIR 0 208 88 1652 172 11 0 chr4 5199709 5199970 -179088692 - AluJo SINE Alu -20 292 29 1044 118 0 0 chr4 5200124 5200259 -179088403 - AluJb SINE Alu -26 286 152 3235 143 118 33 chr4 5200896 5201533 -179087129 - LTR8 LTR ERV1 0 691 1 248 280 40 0 chr4 5201684 5201759 -179086903 + MLT2F LTR ERVL 54 131 -532 321 289 47 0 chr4 5201953 5202081 -179086581 + MLT2F LTR ERVL 421 554 -109 434 283 5 35 chr4 5202626 5202943 -179085719 + G-rich Low_complexity Low_complexity 1 307 0 225 237 0 0 chr4 5203036 5203095 -179085567 + (TTGGGG)n Simple_repeat Simple_repeat 5 63 0 278 333 69 7 chr4 5213539 5213683 -179074979 + MIR SINE MIR 108 260 -2 30420 110 13 60 chr4 5213774 5215940 -179072722 + L1PA7 LINE L1 9 2276 -3878 2412 75 0 3 chr4 5215940 5216235 -179072427 + AluY SINE Alu 1 294 -17 30420 110 13 60 chr4 5216235 5218230 -179070432 + L1PA7 LINE L1 2276 3746 -2408 2048 119 36 23 chr4 5218230 5218533 -179070129 + AluSc SINE Alu 3 309 0 30420 110 13 60 chr4 5218533 5220834 -179067828 + L1PA7 LINE L1 3746 6154 0 2350 82 0 0 chr4 5220873 5221195 -179067467 + AluSc SINE Alu 1 322 0 1946 68 59 94 chr4 5221537 5221709 -179066953 - AluSp SINE Alu -17 296 138 2202 100 0 3 chr4 5221709 5221999 -179066663 - AluY SINE Alu -22 289 1 1946 68 59 94 chr4 5221999 5222133 -179066529 - AluSp SINE Alu -175 138 1 1411 54 0 0 chr4 5223281 5223447 -179065215 - AluY SINE Alu -12 299 134 2138 137 0 9 chr4 5224210 5224525 -179064137 + AluSx SINE Alu 1 312 0 2000 169 7 0 chr4 5224531 5224839 -179063823 + AluJb SINE Alu 1 310 -2 1879 140 0 33 chr4 5225602 5225909 -179062753 + AluJb SINE Alu 2 298 -14 21 0 0 0 chr4 5230617 5230638 -179058024 + AT_rich Low_complexity Low_complexity 1 21 0 227 288 14 13 chr4 5230994 5231084 -179057578 + GA-rich Low_complexity Low_complexity 1 90 0 1373 284 70 16 chr4 5232650 5233224 -179055438 + L1ME3A LINE L1 5564 6168 -2 442 228 223 45 chr4 5233586 5233788 -179054874 + MLT1E LTR MaLR 1 238 -355 867 248 63 4 chr4 5233797 5234035 -179054627 + MLT1E LTR MaLR 341 592 -1 2333 111 0 13 chr4 5234298 5234613 -179054049 - AluY SINE Alu 0 311 1 2095 109 32 0 chr4 5234616 5234901 -179053761 - AluSx SINE Alu -18 294 1 819 187 0 15 chr4 5235303 5235437 -179053225 + FLAM_C SINE Alu 1 132 -1 763 138 98 0 chr4 5235569 5235692 -179052970 - AluJo SINE Alu -177 135 1 238 311 82 0 chr4 5236418 5236479 -179052183 + L2 LINE L2 3136 3201 -71 1211 176 129 29 chr4 5239539 5239818 -179048844 + AluJo SINE Alu 4 310 -2 35 54 0 0 chr4 5239926 5239982 -179048680 + AT_rich Low_complexity Low_complexity 1 56 0 1897 167 3 3 chr4 5240301 5240600 -179048062 + AluSx SINE Alu 1 299 -13 2173 130 0 0 chr4 5240851 5241144 -179047518 + AluSx SINE Alu 1 293 -19 2513 64 0 0 chr4 5241173 5241470 -179047192 + AluY SINE Alu 1 297 -14 1795 163 23 7 chr4 5242074 5242381 -179046281 - AluJo SINE Alu 0 312 1 662 123 105 0 chr4 5242822 5242936 -179045726 - AluSg/x SINE Alu -1 311 186 391 149 402 0 chr4 5242959 5243046 -179045616 - FLAM_C SINE Alu -7 126 5 2034 148 0 10 chr4 5243728 5244032 -179044630 - AluJb SINE Alu -11 301 1 1699 143 3 44 chr4 5244131 5244468 -179044194 + AluSx SINE Alu 1 325 0 1958 145 10 19 chr4 5244498 5244808 -179043854 - AluJo SINE Alu -1 311 5 307 269 111 0 chr4 5244899 5245007 -179043655 - L2 LINE L2 -4 3309 3190 282 341 22 37 chr4 5245128 5245263 -179043399 - L3 LINE CR1 -22 1555 1423 340 305 130 11 chr4 5245351 5245528 -179043134 - L3 LINE CR1 -175 1402 1205 382 259 111 44 chr4 5245544 5245679 -179042983 + MIR SINE MIR 4 147 -115 2135 116 23 13 chr4 5245890 5246193 -179042469 - AluSx SINE Alu -6 306 1 885 153 0 29 chr4 5246220 5246357 -179042305 - FLAM_C SINE Alu 0 133 1 2244 99 3 7 chr4 5246652 5246955 -179041707 + AluY SINE Alu 1 302 -9 524 297 80 42 chr4 5246955 5247144 -179041518 - L1ME LINE L1 -694 5468 5288 2181 114 17 0 chr4 5247144 5247443 -179041219 - AluSx SINE Alu -8 304 1 524 297 80 42 chr4 5247443 5247523 -179041139 - L1ME LINE L1 -874 5288 5212 2035 131 10 10 chr4 5247523 5247820 -179040842 - AluSx SINE Alu -15 297 1 524 297 80 42 chr4 5247820 5248372 -179040290 - L1ME LINE L1 -950 5212 4615 2044 124 3 7 chr4 5248642 5248959 -179039703 + AluSx SINE Alu 1 316 0 1852 132 0 62 chr4 5248981 5249305 -179039357 + AluSx SINE Alu 1 305 0 388 260 149 22 chr4 5250678 5250859 -179037803 - L2 LINE L2 -1 3312 3109 2592 44 0 3 chr4 5251450 5251747 -179036915 + AluY SINE Alu 1 296 -15 188 323 127 61 chr4 5251864 5252375 -179036287 - L2 LINE L2 -1903 1411 867 741 172 112 0 chr4 5252870 5253004 -179035658 + FAM SINE Alu 1 149 -36 250 218 119 0 chr4 5253157 5253258 -179035404 + L1ME LINE L1 2929 3041 -3105 23 33 0 0 chr4 5253305 5253335 -179035327 + AT_rich Low_complexity Low_complexity 1 30 0 2458 82 0 0 chr4 5253389 5253694 -179034968 + AluY SINE Alu 1 305 -6 671 188 0 8 chr4 5253709 5253837 -179034825 + FRAM SINE Alu 49 175 -1 377 275 25 0 chr4 5253847 5253967 -179034695 + L1ME LINE L1 3850 3972 -2174 * 530 191 143 74 chr4 5253966 5254197 -179034465 + L1MC5 LINE L1 6907 7153 -808 2088 134 3 7 chr4 5254198 5254505 -179034157 + AluSx SINE Alu 1 306 -6 636 251 129 8 chr4 5255558 5255813 -179032849 + L1ME LINE L1 5488 5773 -348 2411 95 0 3 chr4 5255981 5256286 -179032376 + AluSx SINE Alu 1 304 -8 2518 54 3 0 chr4 5256430 5256725 -179031937 + AluY SINE Alu 3 298 -13 21 36 0 0 chr4 5257026 5257054 -179031608 + AT_rich Low_complexity Low_complexity 1 28 0 280 313 0 20 chr4 5257069 5257168 -179031494 - L1ME4a LINE L1 -68 6053 5957 2049 142 0 16 chr4 5257669 5257985 -179030677 - AluJo SINE Alu 0 312 2 1621 159 0 87 chr4 5258042 5258375 -179030287 - AluJo SINE Alu -2 310 7 2254 103 3 3 chr4 5258976 5259319 -179029343 - AluSg SINE Alu 0 343 1 248 109 0 55 chr4 5259319 5259340 -179029322 + (TTTTC)n Simple_repeat Simple_repeat 3 180 0 180 111 0 0 chr4 5259342 5259369 -179029293 + (TCCCC)n Simple_repeat Simple_repeat 4 30 0 1981 94 19 11 chr4 5259369 5259634 -179029028 - AluJo SINE Alu -25 287 21 361 182 0 0 chr4 5259636 5259702 -179028960 + MLT1C LTR MaLR 392 457 -10 565 120 0 33 chr4 5260371 5260463 -179028199 + FLAM_A SINE Alu 45 133 -9 387 138 31 0 chr4 5260503 5260568 -179028094 - AluJb SINE Alu -25 277 211 753 218 0 0 chr4 5260568 5260701 -179027961 + AluJo/FRAM SINE Alu 153 285 -27 275 0 29 0 chr4 5260701 5260736 -179027926 + (TAA)n Simple_repeat Simple_repeat 2 37 0 1744 181 32 0 chr4 5261031 5261313 -179027349 + AluJb SINE Alu 1 291 -21 1361 229 87 33 chr4 5261364 5261799 -179026863 - MLT1C LTR MaLR 0 467 1 757 136 0 32 chr4 5261864 5261989 -179026673 + FLAM_A SINE Alu 2 122 -11 1974 138 20 3 chr4 5262042 5262338 -179026324 + AluJb SINE Alu 1 301 -11 2232 99 7 30 chr4 5262340 5262475 -179026187 + AluSq SINE Alu 2 139 -174 2405 61 0 51 chr4 5262475 5262786 -179025876 + AluY SINE Alu 1 295 -16 2232 99 7 30 chr4 5262786 5262953 -179025709 + AluSq SINE Alu 139 297 -16 3378 49 30 5 chr4 5269600 5270031 -179018631 - MLT2A1 LTR ERVL 0 444 3 17762 76 19 24 chr4 5270033 5270203 -179018459 - ERVL-A1 LTR ERVL 0 5654 5485 2132 100 13 17 chr4 5270203 5270504 -179018158 - AluSq SINE Alu -13 300 1 17762 76 19 24 chr4 5270504 5270959 -179017703 - ERVL-A1 LTR ERVL -169 5485 5029 2474 64 0 10 chr4 5270959 5271257 -179017405 - AluY SINE Alu -16 295 1 17762 76 19 24 chr4 5271257 5273466 -179015196 - ERVL-A1 LTR ERVL -625 5029 2911 1430 65 0 6 chr4 5273567 5273736 -179014926 - AluY SINE Alu -143 168 1 4277 177 45 37 chr4 5273736 5273752 -179014910 + L1MB3 LINE L1 4677 4691 -1492 262 0 26 26 chr4 5273752 5273791 -179014871 + (CAAAA)n Simple_repeat Simple_repeat 5 43 0 4277 177 45 37 chr4 5273791 5274241 -179014421 + L1MB3 LINE L1 4691 5136 -1047 2524 61 3 0 chr4 5274241 5274534 -179014128 - AluY SINE Alu -17 294 1 4277 177 45 37 chr4 5274534 5275565 -179013097 + L1MB3 LINE L1 5136 6178 -5 1953 253 20 23 chr4 5275574 5276172 -179012490 + L1M4 LINE L1 2272 2867 -3279 782 168 30 15 chr4 5276346 5276477 -179012185 - FLAM_C SINE Alu 0 133 1 281 285 84 28 chr4 5279485 5279664 -179008998 + L1M4b LINE L1 11 199 -6660 1084 266 96 40 chr4 5280136 5280435 -179008227 + L1M4b LINE L1 1263 1544 -5311 2016 147 0 23 chr4 5280435 5280735 -179007927 + AluJb SINE Alu 1 293 -19 1084 266 96 40 chr4 5280735 5281263 -179007399 + L1M4b LINE L1 1544 1987 -4868 506 189 25 33 chr4 5281303 5281425 -179007237 + MER67B LTR ERV1 78 198 -463 540 202 62 0 chr4 5281426 5281555 -179007107 + L1MC1 LINE L1 6183 6319 -14 2015 115 31 0 chr4 5281563 5281850 -179006812 - AluSx SINE Alu -6 306 11 271 227 193 20 chr4 5281863 5282013 -179006649 + L1M4b LINE L1 2361 2536 -4602 2138 153 0 3 chr4 5282052 5282365 -179006297 + AluSx SINE Alu 1 312 0 270 176 0 0 chr4 5282376 5282427 -179006235 + GA-rich Low_complexity Low_complexity 2 52 0 279 283 65 30 chr4 5282455 5282685 -179005977 + L1M4b LINE L1 2558 2795 -4343 2292 108 10 0 chr4 5282685 5282982 -179005680 + AluSx SINE Alu 1 300 -12 1540 196 0 4 chr4 5283014 5283285 -179005377 + AluJo SINE Alu 24 293 -19 226 182 18 0 chr4 5283343 5283398 -179005264 + L1M4b LINE L1 2781 2836 -4302 881 252 134 9 chr4 5283443 5283832 -179004830 + L1M4b LINE L1 3009 3415 -3542 534 191 24 15 chr4 5283832 5283944 -179004718 + MLT1A1 LTR MaLR 1 93 -272 541 266 12 0 chr4 5283988 5284157 -179004505 + L1M4b LINE L1 3415 3585 -3372 * 2785 249 85 32 chr4 5284132 5285220 -179003442 + L1M4b LINE L1 3837 4981 -1976 990 85 0 0 chr4 5285220 5285350 -179003312 + AluY SINE Alu 171 300 -11 1588 172 21 81 chr4 5285369 5285701 -179002961 + AluJo SINE Alu 1 312 0 1761 202 82 140 chr4 5285707 5286333 -179002329 + L1M4b LINE L1 4957 5499 -1458 2447 78 10 3 chr4 5286333 5286641 -179002021 + AluSg SINE Alu 1 310 0 1761 202 82 140 chr4 5286641 5287068 -179001594 + L1M4b LINE L1 5499 5949 -1008 2201 116 0 0 chr4 5287201 5287512 -179001150 - AluSx SINE Alu 0 311 1 2428 92 0 0 chr4 5288989 5289295 -178999367 - AluY SINE Alu -5 306 1 228 222 0 63 chr4 5289712 5289775 -178998887 - MIR SINE MIR -65 143 85 2317 99 0 0 chr4 5292145 5292448 -178996214 + AluSx SINE Alu 1 303 -9 311 302 102 34 chr4 5292901 5293106 -178995556 + MIR SINE MIR 44 262 0 187 361 118 14 chr4 5293683 5293827 -178994835 - L2 LINE L2 -19 3253 3095 2182 114 0 3 chr4 5294010 5294308 -178994354 - AluSx SINE Alu -12 300 4 307 231 0 13 chr4 5294437 5294515 -178994147 + Charlie8 DNA MER1_type 92 168 -2249 409 271 118 76 chr4 5294971 5295110 -178993552 + L1MC4 LINE L1 3589 3721 -2425 1470 186 3 68 chr4 5295110 5295258 -178993404 + AluJo SINE Alu 1 120 -192 1793 162 10 10 chr4 5295258 5295548 -178993114 - AluJo SINE Alu -22 290 1 1470 186 3 68 chr4 5295548 5295710 -178992952 + AluJo SINE Alu 120 291 -21 409 271 118 76 chr4 5295710 5295730 -178992932 + L1MC4 LINE L1 3721 3739 -2407 282 95 0 0 chr4 5295730 5295772 -178992890 + (CA)n Simple_repeat Simple_repeat 2 43 0 409 271 118 76 chr4 5295772 5296269 -178992393 + L1MC4 LINE L1 3739 4274 -1872 284 229 123 0 chr4 5296401 5296523 -178992139 + L1MC4 LINE L1 4429 4565 -1581 1062 150 40 93 chr4 5296752 5296978 -178991684 + AluSg/x SINE Alu 85 298 -14 424 196 29 20 chr4 5297210 5297312 -178991350 + MLT1C LTR MaLR 323 425 -42 2383 96 0 0 chr4 5297459 5297762 -178990900 + AluSc SINE Alu 1 303 -6 2356 116 138 5 chr4 5298449 5298827 -178989835 + MSTA LTR MaLR 1 428 0 1810 138 70 54 chr4 5299518 5299845 -178988817 + THE1C LTR MaLR 1 336 -39 2271 111 7 0 chr4 5299845 5300151 -178988511 - AluSp SINE Alu -5 308 1 1810 138 70 54 chr4 5300151 5300192 -178988470 + THE1C LTR MaLR 336 375 0 2469 113 0 6 chr4 5300910 5301264 -178987398 - MER1A DNA MER1_type 0 529 178 358 314 69 39 chr4 5301278 5301482 -178987180 + L1MC4 LINE L1 5023 5232 -914 1387 227 54 116 chr4 5301503 5301533 -178987129 + L1MC4 LINE L1 5254 5284 -2524 2383 88 3 0 chr4 5301533 5301829 -178986833 + AluY SINE Alu 1 297 -14 1387 227 54 116 chr4 5301829 5302158 -178986504 + L1MC4 LINE L1 5284 5632 -2176 1998 169 3 0 chr4 5302158 5302459 -178986203 - AluSx SINE Alu -10 302 1 2252 102 10 0 chr4 5302463 5302758 -178985904 - AluSc SINE Alu -11 298 1 1972 136 0 27 chr4 5302766 5303060 -178985602 - AluJo SINE Alu -24 288 3 1387 227 54 116 chr4 5303060 5303199 -178985463 + L1MC4 LINE L1 5642 5788 -2020 2211 145 0 0 chr4 5303199 5303502 -178985160 + AluSx SINE Alu 3 305 -7 1387 227 54 116 chr4 5303502 5303727 -178984935 + L1MC4 LINE L1 5788 5947 -1861 3663 249 100 36 chr4 5303867 5304672 -178983990 + L1MC4 LINE L1 6298 7050 -992 2292 92 17 0 chr4 5304672 5304965 -178983697 + AluSp SINE Alu 1 298 -15 3663 249 100 36 chr4 5304965 5305724 -178982938 + L1MC4 LINE L1 7050 7962 -80 2039 110 14 21 chr4 5305775 5306065 -178982597 - AluSx SINE Alu -24 288 1 222 91 0 0 chr4 5306954 5306987 -178981675 + (TCC)n Simple_repeat Simple_repeat 1 33 0 1151 173 0 0 chr4 5307614 5307793 -178980869 + AluJb SINE Alu 66 244 -68 1136 143 11 17 chr4 5309378 5309553 -178979109 - AluSg/x SINE Alu -16 294 121 21 36 0 0 chr4 5310412 5310440 -178978222 + AT_rich Low_complexity Low_complexity 1 28 0 1344 161 173 4 chr4 5310689 5310959 -178977703 - AluJo SINE Alu 0 311 1 2358 111 3 0 chr4 5312179 5312485 -178976177 + AluSg SINE Alu 1 307 -3 238 281 133 38 chr4 5313192 5313402 -178975260 - L1MC4 LINE L1 -2 8040 7811 1763 105 124 15 chr4 5313428 5313695 -178974967 + AluSg SINE Alu 1 296 -14 778 184 0 0 chr4 5313700 5313825 -178974837 - FLAM_C SINE Alu -18 125 1 250 281 0 16 chr4 5313838 5313902 -178974760 + CT-rich Low_complexity Low_complexity 2 64 0 365 320 178 33 chr4 5313953 5314284 -178974378 - L1MC4 LINE L1 -360 7682 7304 2102 125 68 3 chr4 5314298 5314650 -178974012 + THE1C LTR MaLR 1 375 0 280 316 81 48 chr4 5314667 5314952 -178973710 - L1MC4 LINE L1 -733 7309 7008 803 132 99 0 chr4 5314952 5315073 -178973589 - FLAM_C SINE Alu 0 133 1 280 316 81 48 chr4 5315073 5315144 -178973518 - L1MC4 LINE L1 -1034 7008 6941 1348 168 0 17 chr4 5315310 5315542 -178973120 + AluSq SINE Alu 85 312 -1 753 200 61 22 chr4 5316196 5316376 -178972286 - MIR SINE MIR -2 260 74 405 280 10 0 chr4 5318031 5318131 -178970531 + L2 LINE L2 2657 2757 -557 215 313 57 47 chr4 5318165 5318376 -178970286 + L2 LINE L2 2844 3056 -216 261 309 186 5 chr4 5318921 5319125 -178969537 - L2 LINE L2 -541 2773 2533 668 228 217 11 chr4 5319242 5319431 -178969231 + MIR SINE MIR 28 255 -7 440 302 83 16 chr4 5320213 5320405 -178968257 + L2 LINE L2 3100 3304 -9 370 282 156 26 chr4 5322094 5322555 -178966107 + L1MEd LINE L1 597 1117 -5002 2117 235 88 64 chr4 5322605 5323149 -178965513 + L1MCa LINE L1 888 1417 -5190 2216 117 7 0 chr4 5323149 5323457 -178965205 + AluSx SINE Alu 1 310 -2 2117 235 88 64 chr4 5323457 5324281 -178964381 + L1MCa LINE L1 1417 2219 -4388 795 206 0 0 chr4 5324281 5324412 -178964250 + FLAM_A SINE Alu 3 133 0 2117 235 88 64 chr4 5324412 5324468 -178964194 + L1MCa LINE L1 2219 2272 -4335 2479 83 0 0 chr4 5324468 5324769 -178963893 + AluY SINE Alu 11 311 0 2117 235 88 64 chr4 5324769 5324800 -178963862 + L1MCa LINE L1 2272 2609 -3998 1026 218 43 70 chr4 5324798 5324983 -178963679 + L1MCa LINE L1 3161 3350 -3076 * 1653 146 16 59 chr4 5324983 5325304 -178963358 + AluJb SINE Alu 6 312 0 1026 218 43 70 chr4 5325304 5325587 -178963075 + L1MCa LINE L1 3350 3616 -2810 966 161 11 33 chr4 5325588 5325768 -178962894 + FRAM SINE Alu 1 176 0 2289 106 0 0 chr4 5325800 5326092 -178962570 + AluSx SINE Alu 1 292 -20 1666 170 3 55 chr4 5326105 5326417 -178962245 + AluJo SINE Alu 1 296 -16 7245 189 48 43 chr4 5326418 5326581 -178962081 + L1MB3 LINE L1 3629 3790 -2673 2275 117 0 3 chr4 5326581 5326880 -178961782 + AluSx SINE Alu 1 298 -14 7245 189 48 43 chr4 5326880 5327063 -178961599 + L1MB3 LINE L1 3790 3971 -2492 2370 85 16 0 chr4 5327063 5327370 -178961292 + AluSp SINE Alu 1 312 -1 7245 189 48 43 chr4 5327370 5328079 -178960583 + L1MB3 LINE L1 3971 4675 -1788 2458 89 0 0 chr4 5328079 5328381 -178960281 + AluSx SINE Alu 1 302 -10 7245 189 48 43 chr4 5328381 5328458 -178960204 + L1MB3 LINE L1 4675 4750 -1713 1829 120 45 42 chr4 5328458 5328724 -178959938 + AluY SINE Alu 1 270 -41 201 39 0 0 chr4 5328724 5328750 -178959912 + (CAAA)n Simple_repeat Simple_repeat 1 26 0 1829 120 45 42 chr4 5328750 5328792 -178959870 + AluY SINE Alu 270 310 -1 7245 189 48 43 chr4 5328792 5328983 -178959679 + L1MB3 LINE L1 4750 4939 -1524 2401 77 0 7 chr4 5328983 5329283 -178959379 - AluY SINE Alu -13 298 1 7245 189 48 43 chr4 5329283 5329299 -178959363 + L1MB3 LINE L1 4939 4953 -1510 262 0 26 26 chr4 5329299 5329338 -178959324 + (CAAAA)n Simple_repeat Simple_repeat 5 43 0 7245 189 48 43 chr4 5329338 5329788 -178958874 + L1MB3 LINE L1 4953 5399 -1064 2524 61 3 0 chr4 5329788 5330081 -178958581 - AluY SINE Alu -17 294 1 7245 189 48 43 chr4 5330081 5331112 -178957550 + L1MB3 LINE L1 5399 6458 -5 1953 253 20 23 chr4 5331121 5331719 -178956943 + L1M4 LINE L1 2272 2867 -3279 751 191 32 0 chr4 5331889 5332015 -178956647 - FLAM_C SINE Alu -12 131 2 355 280 5 87 chr4 5332867 5333005 -178955657 + L1M4 LINE L1 4476 4593 -1553 2009 115 0 21 chr4 5333005 5333292 -178955370 - AluSx SINE Alu -18 294 14 355 280 5 87 chr4 5333292 5333360 -178955302 + L1M4 LINE L1 4593 4665 -1481 2408 103 3 0 chr4 5333548 5333860 -178954802 + AluSp SINE Alu 1 313 0 1738 183 13 13 chr4 5333911 5334212 -178954450 - AluJo SINE Alu -3 309 9 1894 150 6 29 chr4 5334256 5334569 -178954093 + AluJo SINE Alu 1 306 -6 228 257 14 0 chr4 5334570 5334640 -178954022 + L1M4 LINE L1 4914 4984 -1162 3378 49 30 5 chr4 5335780 5336211 -178952451 - MLT2A1 LTR ERVL 0 444 3 17749 77 19 24 chr4 5336213 5336383 -178952279 - ERVL-A1 LTR ERVL 0 5654 5485 2132 100 13 17 chr4 5336383 5336684 -178951978 - AluSq SINE Alu -13 300 1 17749 77 19 24 chr4 5336684 5337139 -178951523 - ERVL-A1 LTR ERVL -169 5485 5029 2386 71 3 10 chr4 5337139 5337436 -178951226 - AluY SINE Alu -16 295 1 17749 77 19 24 chr4 5337436 5339684 -178948978 - ERVL-A1 LTR ERVL -625 5029 2875 2323 82 0 26 chr4 5339690 5339995 -178948667 - AluY SINE Alu -14 297 1 1936 100 8 0 chr4 5339999 5340249 -178948413 - AluSg SINE Alu -15 295 44 2860 208 53 20 chr4 5340250 5340984 -178947678 - L1MDb LINE L1 -2001 4956 4199 1473 217 8 42 chr4 5340984 5341346 -178947316 + MLT1A1 LTR MaLR 1 365 0 795 227 146 18 chr4 5341346 5341681 -178946981 - L1MDb LINE L1 -2754 4203 3826 751 245 58 0 chr4 5341680 5341921 -178946741 - L1MDb LINE L1 -4899 1956 1702 * 2030 139 0 0 chr4 5341936 5342217 -178946445 + AluSx SINE Alu 1 281 -31 255 204 0 0 chr4 5342226 5342280 -178946382 + (TATATG)n Simple_repeat Simple_repeat 3 56 0 322 163 23 58 chr4 5342288 5342374 -178946288 - L1MDb LINE L1 -5210 1750 1668 1526 235 163 10 chr4 5342399 5342913 -178945749 - L1MDb LINE L1 -5635 1224 632 1142 181 70 31 chr4 5342979 5343206 -178945456 + MER46A DNA MER2_type 1 236 0 226 303 59 0 chr4 5344294 5344413 -178944249 + L2 LINE L2 2473 2598 -716 232 148 49 49 chr4 5345755 5345816 -178942846 + LTR56 LTR ERV1 1 61 -384 781 138 0 0 chr4 5345816 5345925 -178942737 + AluJb SINE Alu 2 110 -202 959 141 20 0 chr4 5345925 5346074 -178942588 - AluYa8 SINE Alu -20 290 139 2383 109 3 0 chr4 5346076 5346387 -178942275 - AluSq SINE Alu -1 312 1 1246 136 23 0 chr4 5346399 5346576 -178942086 - AluSg/x SINE Alu -16 296 116 2333 95 0 0 chr4 5346597 5346893 -178941769 - AluY SINE Alu -15 296 1 326 302 93 14 chr4 5346925 5347064 -178941598 - LTR49-int LTR ERV1 -4654 1677 1528 1627 169 17 24 chr4 5347094 5347390 -178941272 + AluJb SINE Alu 1 294 -18 1772 154 3 32 chr4 5347398 5347621 -178941041 + AluJb SINE Alu 9 222 -90 3992 181 56 1 chr4 5347621 5348317 -178940345 - MER50 LTR ERV1 0 734 1 1772 154 3 32 chr4 5348317 5348405 -178940257 + AluJb SINE Alu 222 311 -1 551 183 125 17 chr4 5348934 5349054 -178939608 + FLAM_C SINE Alu 1 133 0 2119 88 51 17 chr4 5349069 5349364 -178939298 + AluSp SINE Alu 1 305 -8 240 108 54 0 chr4 5349377 5349414 -178939248 + FLAM_C SINE Alu 132 170 0 352 271 122 0 chr4 5349562 5349669 -178938993 - MER34B LTR ERV1 -441 124 5 2393 72 7 0 chr4 5350036 5350326 -178938336 - AluSc SINE Alu -17 292 1 1974 121 3 65 chr4 5350334 5350657 -178938005 - AluSq SINE Alu -10 303 1 610 219 38 104 chr4 5350909 5350967 -178937695 - LTR56 LTR ERV1 -120 325 265 1612 169 6 60 chr4 5350967 5351107 -178937555 + AluJb SINE Alu 1 147 -165 2489 70 3 6 chr4 5351107 5351419 -178937243 + AluY SINE Alu 1 311 0 1612 169 6 60 chr4 5351419 5351592 -178937070 + AluJb SINE Alu 147 297 -15 610 219 38 104 chr4 5351592 5351820 -178936842 - LTR56 LTR ERV1 -180 265 58 1425 134 13 22 chr4 5351829 5352053 -178936609 - AluJo SINE Alu -3 309 88 207 162 0 0 chr4 5352060 5352097 -178936565 + (TA)n Simple_repeat Simple_repeat 1 37 0 22 0 0 0 chr4 5352098 5352120 -178936542 + AT_rich Low_complexity Low_complexity 1 22 0 2117 121 0 29 chr4 5352127 5352442 -178936220 + AluSq SINE Alu 1 306 -7 837 178 40 7 chr4 5352591 5352743 -178935919 - FRAM SINE Alu -25 151 1 501 235 11 74 chr4 5352758 5353043 -178935619 + LTR49-int LTR ERV1 2707 2973 -1907 987 155 123 40 chr4 5353061 5353338 -178935324 + LTR49-int LTR ERV1 4168 4467 -3653 896 171 57 0 chr4 5353347 5353505 -178935157 + AluJb SINE Alu 144 310 -2 862 103 58 17 chr4 5353539 5353713 -178934949 + LTR49-int LTR ERV1 4007 4187 -2144 2228 97 10 3 chr4 5353714 5354004 -178934658 - AluSg1 SINE Alu -17 292 1 2332 82 0 3 chr4 5354016 5354309 -178934353 - AluY SINE Alu -19 292 1 575 220 55 0 chr4 5354346 5354455 -178934207 + AluJb SINE Alu 3 117 -195 312 285 73 61 chr4 5355252 5355417 -178933245 - L1ME3 LINE L1 -192 5970 5804 316 306 20 41 chr4 5355507 5355654 -178933008 - L1ME3 LINE L1 -533 5629 5497 1590 181 26 36 chr4 5355796 5355959 -178932703 - AluJo SINE Alu -11 301 141 2706 49 0 0 chr4 5355959 5356265 -178932397 - AluY SINE Alu -5 306 1 1590 181 26 36 chr4 5356265 5356405 -178932257 - AluJo SINE Alu -171 141 1 285 323 62 13 chr4 5356406 5356632 -178932030 - L1ME3 LINE L1 -1588 4558 4322 1873 169 10 0 chr4 5356632 5356922 -178931740 - AluJo SINE Alu -15 297 5 1679 161 3 25 chr4 5357201 5357487 -178931175 + AluJb SINE Alu 1 280 -32 303 93 0 0 chr4 5357490 5357533 -178931129 + (GGGA)n Simple_repeat Simple_repeat 4 46 0 2315 85 20 0 chr4 5357537 5357832 -178930830 - AluSp SINE Alu -12 301 1 337 243 57 64 chr4 5357838 5357978 -178930684 - L1ME3 LINE L1 -2298 3848 3710 862 123 0 0 chr4 5357980 5358094 -178930568 - AluSp/q SINE Alu -25 288 175 238 296 116 73 chr4 5358097 5358536 -178930126 - L1ME3 LINE L1 -2397 3749 3292 1750 151 28 14 chr4 5358564 5358849 -178929813 - AluJb SINE Alu -21 291 3 756 261 91 67 chr4 5358858 5359312 -178929350 - L1MC5 LINE L1 -30 7931 2938 1410 90 0 6 chr4 5359343 5359520 -178929142 + AluSq SINE Alu 3 178 -135 2213 133 8 41 chr4 5359523 5359985 -178928677 - AluSx SINE Alu -10 302 1 1888 161 14 0 chr4 5360032 5360318 -178928344 + AluSx SINE Alu 17 306 -6 2170 123 3 0 chr4 5360320 5360620 -178928042 + AluSx SINE Alu 1 301 -11 331 253 234 7 chr4 5360745 5360899 -178927763 - MER5A DNA MER1_type 0 189 1 1800 163 50 0 chr4 5361833 5362115 -178926547 - AluJb SINE Alu -16 296 1 2410 78 0 3 chr4 5363875 5364169 -178924493 - AluSc SINE Alu -14 295 3 2372 99 0 7 chr4 5364173 5364475 -178924187 - AluSx SINE Alu -12 300 1 22 0 0 0 chr4 5364479 5364501 -178924161 + AT_rich Low_complexity Low_complexity 1 22 0 260 222 0 16 chr4 5365033 5365096 -178923566 + (TATATG)n Simple_repeat Simple_repeat 2 63 0 727 291 86 79 chr4 5365131 5365356 -178923306 + L1M4 LINE L1 2676 2898 -3248 1920 121 81 0 chr4 5365356 5365629 -178923033 - AluSx SINE Alu -17 295 1 727 291 86 79 chr4 5365629 5365656 -178923006 + L1M4 LINE L1 2898 2923 -3223 2335 97 0 0 chr4 5365656 5365978 -178922684 + AluSx SINE Alu 1 312 0 727 291 86 79 chr4 5365978 5366144 -178922518 + L1M4 LINE L1 2923 3086 -3060 2594 59 0 3 chr4 5366144 5366449 -178922213 + AluY SINE Alu 1 304 -7 727 291 86 79 chr4 5366449 5366492 -178922170 + L1M4 LINE L1 3086 3127 -3019 1787 183 0 13 chr4 5366492 5366804 -178921858 + AluJb SINE Alu 1 308 -4 727 291 86 79 chr4 5366804 5366824 -178921838 + L1M4 LINE L1 3127 3145 -3001 2414 97 0 0 chr4 5366824 5367134 -178921528 + AluSg SINE Alu 1 310 0 727 291 86 79 chr4 5367134 5367565 -178921097 + L1M4 LINE L1 3145 3572 -2574 2103 89 14 11 chr4 5367565 5367871 -178920791 - AluSg SINE Alu 0 307 1 727 291 86 79 chr4 5367871 5368533 -178920129 + L1M4 LINE L1 3572 4228 -1918 2235 114 0 9 chr4 5368533 5368849 -178919813 + AluSq SINE Alu 1 313 0 727 291 86 79 chr4 5368849 5368872 -178919790 + L1M4 LINE L1 4228 4249 -1897 2012 138 3 0 chr4 5368872 5369178 -178919484 + AluSq SINE Alu 1 307 0 727 291 86 79 chr4 5369178 5369218 -178919444 + L1M4 LINE L1 4249 4287 -1859 1349 142 47 91 chr4 5369218 5369247 -178919415 - MER33 DNA MER1_type -2261 324 295 2043 111 0 108 chr4 5369247 5369591 -178919071 + AluSx SINE Alu 1 307 -5 1349 142 47 91 chr4 5369591 5369900 -178918762 - MER33 DNA MER1_type -2290 295 1 727 291 86 79 chr4 5369900 5370159 -178918503 + L1M4 LINE L1 4287 4599 -1547 2000 118 0 21 chr4 5370159 5370446 -178918216 - AluSx SINE Alu -18 294 14 727 291 86 79 chr4 5370446 5370514 -178918148 + L1M4 LINE L1 4599 4665 -1481 2443 74 3 6 chr4 5370702 5371014 -178917648 + AluY SINE Alu 1 311 0 517 174 0 0 chr4 5371015 5371101 -178917561 + AluJb SINE Alu 127 212 -100 3239 194 60 12 chr4 5372242 5372902 -178915760 + L1M4 LINE L1 3573 4276 -1870 2166 82 53 4 chr4 5372902 5373183 -178915479 + AluSq SINE Alu 1 295 -18 3239 194 60 12 chr4 5373183 5373285 -178915377 + L1M4 LINE L1 4276 4372 -1774 184 274 24 113 chr4 5373286 5373410 -178915252 + L2 LINE L2 3015 3127 -145 210 71 0 0 chr4 5374714 5374742 -178913920 + (TG)n Simple_repeat Simple_repeat 1 28 0 357 356 0 6 chr4 5375395 5375572 -178913090 + (CA)n Simple_repeat Simple_repeat 1 176 0 226 179 0 0 chr4 5375900 5375939 -178912723 - MIR SINE MIR -157 105 67 22 35 0 0 chr4 5376891 5376920 -178911742 + AT_rich Low_complexity Low_complexity 1 29 0 1368 172 18 0 chr4 5427198 5427425 -178861237 - MER1A DNA MER1_type -296 231 1 1884 174 10 0 chr4 5427504 5427798 -178860864 - AluJo SINE Alu -15 297 1 1976 157 0 3 chr4 5427798 5428097 -178860565 - AluJo SINE Alu -13 299 1 184 233 0 100 chr4 5428793 5428853 -178859809 + MIR3 SINE MIR 143 196 -12 340 156 0 47 chr4 5429000 5429064 -178859598 + AluJ/FLAM SINE Alu 1 61 -241 2354 84 3 3 chr4 5429743 5430041 -178858621 + AluSp SINE Alu 1 298 -15 2333 108 0 7 chr4 5430716 5431023 -178857639 + AluSx SINE Alu 1 305 -7 248 180 49 0 chr4 5431128 5431189 -178857473 + A-rich Low_complexity Low_complexity 3 66 0 2350 112 0 0 chr4 5431356 5431668 -178856994 + AluSx SINE Alu 1 312 0 216 0 0 0 chr4 5432120 5432144 -178856518 + (CA)n Simple_repeat Simple_repeat 1 24 0 308 316 71 26 chr4 5433388 5433543 -178855119 + L1MC5 LINE L1 7327 7488 -473 745 175 60 22 chr4 5433599 5433782 -178854880 + L1MB4 LINE L1 5991 6180 0 321 161 0 0 chr4 5433785 5433841 -178854821 + L1MB8 LINE L1 6093 6148 -30 1684 58 0 19 chr4 5434240 5434448 -178854214 + AluY SINE Alu 96 299 -12 2295 77 3 39 chr4 5434858 5435169 -178853493 - AluY SINE Alu -11 300 1 805 235 11 0 chr4 5435170 5435349 -178853313 - AluJo SINE Alu -124 188 8 2272 113 0 3 chr4 5435493 5435802 -178852860 - AluSx SINE Alu 0 312 5 217 232 146 66 chr4 5438632 5438783 -178849879 - MIR SINE MIR -19 243 81 26 50 0 0 chr4 5439100 5439140 -178849522 + AT_rich Low_complexity Low_complexity 1 40 0 2102 125 0 0 chr4 5439159 5439438 -178849224 - AluJb SINE Alu -29 283 5 2097 182 73 137 chr4 5439668 5440124 -178848538 + Charlie1 DNA MER1_type 1872 2356 -405 1911 123 0 53 chr4 5440124 5440442 -178848220 + AluSc SINE Alu 1 301 -8 2097 182 73 137 chr4 5440442 5440649 -178848013 + Charlie1 DNA MER1_type 2356 2458 -303 2068 89 0 19 chr4 5440649 5440920 -178847742 + AluSq SINE Alu 1 266 -47 2097 182 73 137 chr4 5440920 5441206 -178847456 + Charlie1 DNA MER1_type 2458 2761 0 420 320 33 62 chr4 5441361 5441605 -178847057 + L1MC4 LINE L1 7758 7994 -48 321 347 67 21 chr4 5441675 5441868 -178846794 - L1MEd LINE L1 -4907 1477 1302 307 305 125 38 chr4 5441948 5442315 -178846347 - L1MEd LINE L1 -5288 1084 686 247 287 54 30 chr4 5442483 5442578 -178846084 - L1MEd LINE L1 -5924 448 346 2328 90 0 3 chr4 5442578 5442877 -178845785 - AluSq SINE Alu -15 298 1 247 287 54 30 chr4 5442877 5442948 -178845714 - L1MEd LINE L1 -6026 346 278 2472 86 0 3 chr4 5443058 5443371 -178845291 - AluSx SINE Alu 0 312 1 1436 169 97 29 chr4 5443923 5444201 -178844461 - AluJb SINE Alu -13 299 3 923 126 0 38 chr4 5444321 5444480 -178844182 + MSTC LTR MaLR 225 377 -51 213 242 106 0 chr4 5445674 5445740 -178842922 - MIR SINE MIR -79 183 111 331 284 199 0 chr4 5445751 5445952 -178842710 - MIR SINE MIR 0 262 22 2538 64 0 3 chr4 5446338 5446636 -178842026 - AluY SINE Alu -14 297 1 304 247 0 14 chr4 5447252 5447325 -178841337 + L1ME4a LINE L1 6043 6114 -7 2147 66 92 0 chr4 5447359 5447632 -178841030 + AluY SINE Alu 1 298 -13 1643 159 78 3 chr4 5447833 5448116 -178840546 - AluJo SINE Alu -8 304 1 2173 106 3 39 chr4 5448302 5448443 -178840219 + AluSg SINE Alu 1 145 -165 2486 74 0 0 chr4 5448443 5448740 -178839922 + AluY SINE Alu 1 297 -14 2173 106 3 39 chr4 5448740 5448909 -178839753 + AluSg SINE Alu 145 300 -10 2014 132 35 0 chr4 5449037 5449325 -178839337 + AluSg SINE Alu 2 299 -11 194 307 120 7 chr4 5449490 5449640 -178839022 + MIR SINE MIR 96 262 0 2022 145 10 0 chr4 5450460 5450764 -178837898 + AluJb SINE Alu 1 307 -5 1354 163 106 12 chr4 5451350 5451595 -178837067 + AluJb SINE Alu 1 268 -44 779 179 8 0 chr4 5451641 5451764 -178836898 + FLAM_C SINE Alu 1 124 -9 37 23 0 0 chr4 5451764 5451808 -178836854 + AT_rich Low_complexity Low_complexity 1 44 0 1750 108 123 4 chr4 5452037 5452306 -178836356 + AluSx SINE Alu 1 301 -1 2401 62 3 7 chr4 5453012 5453302 -178835360 + AluSc SINE Alu 1 289 -20 1648 215 19 25 chr4 5453560 5453927 -178834735 + MLT1A1 LTR MaLR 1 365 0 2147 131 0 7 chr4 5454198 5454503 -178834159 - AluJb SINE Alu -3 309 7 376 310 120 37 chr4 5454690 5454990 -178833672 + L2 LINE L2 2478 2802 -512 517 245 38 43 chr4 5455142 5455326 -178833336 + LTR41 LTR ERVL 1 183 -590 1927 102 51 17 chr4 5455623 5455917 -178832745 - AluSq SINE Alu -9 304 1 326 311 58 39 chr4 5455986 5456192 -178832470 + L2 LINE L2 3084 3293 -20 344 212 106 15 chr4 5456357 5456489 -178832173 + L1MEc LINE L1 744 887 -5509 1899 156 3 19 chr4 5456493 5456808 -178831854 + AluSx SINE Alu 1 310 -2 1685 83 0 200 chr4 5456817 5457192 -178831470 + AluSx SINE Alu 3 302 0 2237 91 13 7 chr4 5457201 5457499 -178831163 + AluSp SINE Alu 1 300 -13 469 207 112 73 chr4 5457499 5457671 -178830991 + L1M4 LINE L1 4247 4428 -1718 754 187 8 0 chr4 5457673 5457796 -178830866 - FLAM_C SINE Alu -16 127 4 2351 191 43 41 chr4 5457843 5458434 -178830228 + L1M4 LINE L1 4460 5054 -1092 2264 107 10 0 chr4 5458434 5458733 -178829929 - AluSg SINE Alu -8 302 1 2351 191 43 41 chr4 5458733 5458796 -178829866 + L1M4 LINE L1 5054 5115 -1031 2466 67 0 0 chr4 5458819 5459116 -178829546 + AluY SINE Alu 1 297 -14 270 284 15 0 chr4 5659695 5659762 -178628900 + MER112 DNA MER1_type 18 85 -175 1502 128 54 0 chr4 5659847 5660089 -178628573 - AluJo SINE Alu -57 255 1 2010 127 0 13 chr4 5660099 5660414 -178628248 - AluSx SINE Alu -1 311 1 1976 123 3 13 chr4 5660426 5660742 -178627920 - AluSq SINE Alu 0 313 1 180 333 78 31 chr4 5661705 5661834 -178626828 + MIR3 SINE MIR 11 145 -63 468 125 14 0 chr4 5662689 5662761 -178625901 - AluS SINE Alu -238 74 2 1926 255 30 11 chr4 5662761 5663757 -178624905 - L1MB3 LINE L1 -351 5832 4818 1940 113 3 3 chr4 5663802 5664103 -178624559 + AluSp SINE Alu 1 301 -12 1102 216 2 121 chr4 5664173 5664380 -178624282 - L1MA4 LINE L1 -170 6130 5900 1482 179 0 4 chr4 5664380 5664660 -178624002 - AluSx SINE Alu -32 280 2 1102 216 2 121 chr4 5664660 5664702 -178623960 - L1MA4 LINE L1 -400 5900 5855 2633 20 0 0 chr4 5664702 5665003 -178623659 + AluY SINE Alu 11 311 0 1102 216 2 121 chr4 5665003 5665165 -178623497 - L1MA4 LINE L1 -445 5855 5767 1973 124 0 31 chr4 5665351 5665674 -178622988 + AluSp SINE Alu 1 313 0 380 228 74 74 chr4 5665817 5665966 -178622696 + MER5B DNA MER1_type 25 173 -5 697 228 46 0 chr4 5666069 5666266 -178622396 - MER6B DNA MER2_type 0 210 5 2224 108 0 6 chr4 5668700 5669015 -178619647 - AluSq SINE Alu 0 313 1 594 233 29 86 chr4 5669082 5669172 -178619490 + L1MEd LINE L1 23 117 -6002 2027 105 11 0 chr4 5669172 5669458 -178619204 + AluSq SINE Alu 1 289 -24 243 0 0 0 chr4 5669463 5669490 -178619172 + (TAAAA)n Simple_repeat Simple_repeat 3 29 0 594 233 29 86 chr4 5669490 5669603 -178619059 + L1MEd LINE L1 121 220 -5899 1102 267 58 47 chr4 5669664 5669901 -178618761 + L1MEd LINE L1 329 575 -5544 2123 86 17 3 chr4 5669901 5670191 -178618471 + AluSq SINE Alu 1 294 -19 1102 267 58 47 chr4 5670191 5670398 -178618264 + L1MEd LINE L1 575 778 -5341 341 247 0 12 chr4 5670482 5670567 -178618095 + MLT1E LTR MaLR 36 119 -474 626 234 0 23 chr4 5670567 5670765 -178617897 - FLAM_C SINE Alu 0 143 2 2063 100 21 0 chr4 5670775 5671064 -178617598 - AluSx SINE Alu -17 295 1 236 263 13 40 chr4 5671072 5671148 -178617514 + MLT1E3 LTR MaLR 12 85 -569 327 277 37 9 chr4 5671163 5671378 -178617284 + MLT1E3 LTR MaLR 193 397 -227 1835 206 101 30 chr4 5671382 5672484 -178616178 - SATR1 Satellite Satellite -20 1179 1 315 211 11 63 chr4 5672560 5672750 -178615912 + (TTA)n Simple_repeat Simple_repeat 1 180 0 2082 206 144 13 chr4 5672864 5674080 -178614582 - SATR1 Satellite Satellite -24 1374 1 2145 192 108 12 chr4 5674118 5674912 -178613750 - SATR1 Satellite Satellite -2 870 1 25057 101 13 14 chr4 5675266 5679053 -178609609 + HERVE LTR ERV1 1108 4945 -2868 2135 204 106 2 chr4 5679059 5680308 -178608354 - SATR1 Satellite Satellite 0 1379 1 2055 155 111 40 chr4 5680325 5680886 -178607776 - SATR1 Satellite Satellite 0 600 1 892 219 286 9 chr4 5680916 5681245 -178607417 - SATR1 Satellite Satellite -3 467 48 1305 101 29 14 chr4 5681249 5681456 -178607206 - AluSq SINE Alu -91 222 13 4057 107 35 2 chr4 5682441 5683076 -178605586 - L1PA5 LINE L1 -32 6122 5467 2086 123 0 3 chr4 5683255 5683557 -178605105 - AluSg SINE Alu -9 301 1 1796 237 24 26 chr4 5683560 5684028 -178604634 - MLT1C LTR MaLR 0 467 1 2674 142 19 54 chr4 5684036 5684161 -178604501 + L1MA8 LINE L1 5719 5847 -444 1678 160 3 35 chr4 5684161 5684303 -178604359 + AluJb SINE Alu 1 146 -166 1984 75 104 4 chr4 5684303 5684583 -178604079 + AluSp SINE Alu 2 309 -4 1678 160 3 35 chr4 5684583 5684753 -178603909 + AluJb SINE Alu 146 303 -9 2674 142 19 54 chr4 5684753 5685148 -178603514 + L1MA8 LINE L1 5847 6221 -70 7558 111 54 11 chr4 5685153 5686309 -178602353 - HSMAR2 DNA Mariner -5 1297 93 309 262 123 41 chr4 5686820 5686942 -178601720 - MIR SINE MIR -7 255 124 760 129 313 0 chr4 5686947 5687094 -178601568 - MER46A DNA MER2_type 0 236 44 198 274 39 0 chr4 5687116 5687167 -178601495 - MIR SINE MIR -165 97 45 23 0 0 0 chr4 5687424 5687447 -178601215 + AT_rich Low_complexity Low_complexity 1 23 0 873 136 8 0 chr4 5688022 5688154 -178600508 + FLAM_A SINE Alu 1 133 0 202 308 70 64 chr4 5688346 5688518 -178600144 - L2 LINE L2 -3061 253 81 1131 183 0 24 chr4 5689319 5689532 -178599130 + AluJo SINE Alu 85 292 -20 1802 149 3 13 chr4 5690630 5690931 -178597731 + AluJb SINE Alu 1 298 -14 271 284 65 7 chr4 5690939 5691094 -178597568 + L1ME4a LINE L1 5956 6119 -2 490 264 87 5 chr4 5691118 5691326 -178597336 + L1MC4a LINE L1 5674 5898 -1910 892 253 80 118 chr4 5691331 5691967 -178596695 + L1ME3A LINE L1 5559 6170 0 2099 104 3 28 chr4 5692674 5692992 -178595670 + AluSp SINE Alu 1 310 -3 544 276 144 0 chr4 5693552 5693726 -178594936 + MIR SINE MIR 13 211 -51 2018 119 3 19 chr4 5693774 5694086 -178594576 - AluSx SINE Alu -5 307 1 380 201 166 14 chr4 5694193 5694332 -178594330 + MER106B DNA MER1_type 865 1024 -35 292 43 109 0 chr4 5694325 5694371 -178594291 - MER106A DNA MER1_type -13 223 173 * 2193 102 0 0 chr4 5694402 5694697 -178593965 - AluSq SINE Alu -18 295 1 212 280 224 28 chr4 5694743 5694850 -178593812 - MER5B DNA MER1_type 0 178 51 2374 41 0 10 chr4 5694969 5695260 -178593402 - AluY SINE Alu -23 288 1 214 358 0 0 chr4 5695638 5695719 -178592943 + MIR SINE MIR 59 139 -69 1847 131 13 23 chr4 5696072 5696377 -178592285 + AluJb SINE Alu 1 302 -10 509 138 0 0 chr4 5697556 5697643 -178591019 - L1MA9 LINE L1 0 6312 6226 1147 135 53 55 chr4 5697654 5697944 -178590718 - L1MA9 LINE L1 -15 6285 6007 191 175 79 79 chr4 5697948 5698011 -178590651 + L2 LINE L2 3202 3264 -8 2039 77 0 58 chr4 5698632 5698942 -178589720 - AluSg SINE Alu -18 292 1 286 236 89 102 chr4 5698984 5699141 -178589521 + MIR3 SINE MIR 36 190 -18 408 268 126 35 chr4 5699574 5699772 -178588890 - L1MC/D LINE L1 -2018 5790 5575 300 266 65 81 chr4 5700893 5701017 -178587645 - L2 LINE L2 -14 3258 3137 181 200 25 0 chr4 5701060 5701100 -178587562 - L2 LINE L2 -1 3271 3231 2060 102 23 0 chr4 5701389 5701692 -178586970 + AluSg SINE Alu 1 310 0 2005 116 9 38 chr4 5702268 5702588 -178586074 + AluSq SINE Alu 1 311 -2 326 289 250 19 chr4 5702732 5702940 -178585722 + MIR SINE MIR 7 262 0 921 253 37 17 chr4 5703532 5703773 -178584889 + MIR SINE MIR 17 262 0 22 0 0 0 chr4 5703811 5703833 -178584829 + AT_rich Low_complexity Low_complexity 1 22 0 363 169 26 39 chr4 5703945 5704022 -178584640 + MIR SINE MIR 187 262 0 1395 80 0 50 chr4 5704193 5704393 -178584269 - AluSc SINE Alu -13 296 107 2507 55 0 0 chr4 5704394 5704701 -178583961 - AluY SINE Alu -4 307 1 312 240 69 98 chr4 5704701 5704905 -178583757 - L1MC/D LINE L1 -515 5606 5409 3111 81 39 9 chr4 5705344 5705736 -178582926 + MLT2A1 LTR ERVL 1 409 -35 318 106 0 0 chr4 5705736 5705783 -178582879 + (TA)n Simple_repeat Simple_repeat 2 48 0 3111 81 39 9 chr4 5705783 5705821 -178582841 + MLT2A1 LTR ERVL 409 444 0 272 197 13 53 chr4 5705833 5705864 -178582798 + (TAA)n Simple_repeat Simple_repeat 2 33 -41 805 153 0 0 chr4 5705864 5705982 -178582680 + FLAM_C SINE Alu 1 118 -15 272 197 13 53 chr4 5705982 5706026 -178582636 + (TAA)n Simple_repeat Simple_repeat 33 74 0 275 311 19 0 chr4 5706179 5706285 -178582377 + LTR16C LTR ERVL 17 124 -367 1994 168 109 26 chr4 5707123 5707405 -178581257 - LTR32 LTR ERVL 0 471 141 180 0 0 0 chr4 5707405 5707425 -178581237 + (CAGGA)n Simple_repeat Simple_repeat 5 24 0 1994 168 109 26 chr4 5707425 5707564 -178581098 - LTR32 LTR ERVL -330 141 15 632 253 104 22 chr4 5707567 5707749 -178580913 + MIR SINE MIR 47 243 -19 380 264 11 0 chr4 5707962 5708049 -178580613 - MIR SINE MIR -60 202 115 2187 104 0 0 chr4 5708325 5708623 -178580039 + AluSx SINE Alu 1 298 -14 648 174 0 3 chr4 5708623 5708738 -178579924 - LTR18A LTR ERVL -6 351 248 715 286 61 5 chr4 5708891 5709087 -178579575 - LTR18A LTR ERVL -147 210 4 398 272 48 48 chr4 5709200 5709347 -178579315 - MER117 DNA MER1_type -49 148 2 3984 99 5 0 chr4 5709564 5710119 -178578543 + L1PA10 LINE L1 5611 6168 0 21 0 0 0 chr4 5710466 5710487 -178578175 + GC_rich Low_complexity Low_complexity 1 21 0 1896 187 118 1 chr4 5711098 5711830 -178576832 - SATR1 Satellite Satellite -2 817 1 35 24 0 0 chr4 5711830 5711872 -178576790 + AT_rich Low_complexity Low_complexity 1 42 0 378 236 11 35 chr4 5711922 5712096 -178576566 + (TAA)n Simple_repeat Simple_repeat 3 172 0 22 35 0 0 chr4 5712143 5712172 -178576490 + AT_rich Low_complexity Low_complexity 1 29 0 1734 203 114 31 chr4 5712218 5713218 -178575444 + SATR1 Satellite Satellite 1 1083 -131 3478 219 16 62 chr4 5713491 5714507 -178574155 - LTR5 LTR ERVK 0 969 1 34 24 0 0 chr4 5714968 5715009 -178573653 + AT_rich Low_complexity Low_complexity 1 41 0 2774 245 24 39 chr4 5715020 5715270 -178573392 - L1MB3 LINE L1 -30 6153 5901 1914 124 36 0 chr4 5715270 5715544 -178573118 - AluSx SINE Alu -17 295 12 2774 245 24 39 chr4 5715544 5715644 -178573018 - L1MB3 LINE L1 -282 5901 5801 230 81 27 0 chr4 5715644 5715681 -178572981 + (TTTG)n Simple_repeat Simple_repeat 1 38 0 1708 178 0 3 chr4 5715683 5715976 -178572686 - AluSx SINE Alu -12 300 9 2774 245 24 39 chr4 5715976 5716977 -178571685 - L1MB3 LINE L1 -383 5800 4818 2109 122 6 3 chr4 5717022 5717334 -178571328 + AluSp SINE Alu 1 313 0 1187 214 18 68 chr4 5717420 5717619 -178571043 - L1MA4 LINE L1 -170 6130 5958 1691 163 3 3 chr4 5717619 5717902 -178570760 - AluSx SINE Alu -29 283 1 1187 214 18 68 chr4 5717902 5718085 -178570577 - L1MA4 LINE L1 -342 5958 5767 282 259 105 35 chr4 5718123 5718266 -178570396 + HsTC2 DNA Tc2 1633 1785 -113 1971 151 0 34 chr4 5718271 5718595 -178570067 + AluSp SINE Alu 1 313 0 309 313 20 14 chr4 5718737 5718884 -178569778 + MER5B DNA MER1_type 25 172 -6 701 230 46 0 chr4 5718988 5719184 -178569478 - MER6B DNA MER2_type -1 209 5 1304 146 27 18 chr4 5721074 5721294 -178567368 + AluSq SINE Alu 1 222 -91 1945 186 119 24 chr4 5721299 5723156 -178565506 + SATR1 Satellite Satellite 1 2035 -62 1683 211 110 27 chr4 5723167 5723735 -178564927 + SATR1 Satellite Satellite 1 615 -20 27241 104 11 10 chr4 5723735 5727790 -178560872 - HERVE LTR ERV1 -2648 5165 1108 239 207 7 64 chr4 5727844 5727984 -178560678 + (TAA)n Simple_repeat Simple_repeat 1 132 0 1819 217 113 12 chr4 5728137 5729893 -178558769 + SATR1 Satellite Satellite 1 1933 -130 25122 108 12 12 chr4 5729900 5733732 -178554930 - HERVE LTR ERV1 -2869 4944 1110 292 219 5 59 chr4 5733795 5733982 -178554680 + (TAA)n Simple_repeat Simple_repeat 2 178 0 22 70 0 0 chr4 5733985 5734028 -178554634 + AT_rich Low_complexity Low_complexity 1 43 0 1404 240 122 40 chr4 5734075 5735067 -178553595 + SATR1 Satellite Satellite 1 1073 -144 554 227 258 2 chr4 5735168 5735444 -178553218 + SATR1 Satellite Satellite 1 346 -144 806 204 251 57 chr4 5735502 5735909 -178552753 + SATR1 Satellite Satellite 1 485 -2 863 235 206 40 chr4 5735929 5737226 -178551436 + SATR1 Satellite Satellite 1 1512 -405 2039 128 7 3 chr4 5738917 5739221 -178549441 + AluSq SINE Alu 1 305 -8 186 276 105 13 chr4 5739314 5739390 -178549272 - L2 LINE L2 -32 3240 3158 1904 103 0 8 chr4 5739644 5739905 -178548757 - AluSg SINE Alu -51 259 1 269 371 48 14 chr4 5740269 5740479 -178548183 + MIR SINE MIR 32 248 -14 34 0 0 0 chr4 5741267 5741301 -178547361 + AT_rich Low_complexity Low_complexity 1 34 0 2867 244 23 32 chr4 5741321 5741568 -178547094 - L1MB3 LINE L1 -32 6151 5903 1984 161 0 0 chr4 5741568 5741873 -178546789 - AluSx SINE Alu -7 305 1 2867 244 23 32 chr4 5741873 5741975 -178546687 - L1MB3 LINE L1 -280 5903 5802 2058 130 3 3 chr4 5741975 5742302 -178546360 - AluSx SINE Alu 0 327 1 2867 244 23 32 chr4 5742302 5743295 -178545367 - L1MB3 LINE L1 -381 5802 4818 2308 104 3 3 chr4 5743340 5743649 -178545013 + AluSp SINE Alu 1 309 -4 1151 199 2 108 chr4 5743728 5743951 -178544711 - L1MA4 LINE L1 -170 6130 5968 1682 187 0 3 chr4 5743951 5744235 -178544427 - AluSx SINE Alu -29 283 1 1151 199 2 108 chr4 5744235 5744418 -178544244 - L1MA4 LINE L1 -332 5968 5767 300 259 101 29 chr4 5744460 5744599 -178544063 + HsTC2 DNA Tc2 1635 1783 -115 2183 108 0 57 chr4 5744604 5744936 -178543726 + AluSp SINE Alu 1 313 0 339 272 88 0 chr4 5745131 5745245 -178543417 + MER5B DNA MER1_type 50 173 -5 320 173 37 12 chr4 5745349 5745430 -178543232 - MER6 DNA MER2_type 0 865 783 221 297 31 0 chr4 5746604 5746668 -178541994 + MER91 DNA MER1_type 125 190 0 1601 203 22 30 chr4 5746830 5747195 -178541467 - MLT1A1 LTR MaLR -3 362 1 739 313 114 16 chr4 5747753 5748251 -178540411 - L1ME3A LINE L1 -208 5962 5416 322 274 10 70 chr4 5748757 5748958 -178539704 + L1ME4a LINE L1 5676 5864 -257 223 320 152 8 chr4 5748992 5749117 -178539545 - MER5A DNA MER1_type -3 186 44 * 380 291 90 8 chr4 5749007 5749141 -178539521 + MER5A DNA MER1_type 37 181 -8 2308 113 0 0 chr4 5749290 5749590 -178539072 + AluSq SINE Alu 1 300 -13 1579 173 40 23 chr4 5749603 5749776 -178538886 - AluJo SINE Alu -7 305 123 216 0 0 0 chr4 5749776 5749800 -178538862 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1579 173 40 23 chr4 5749800 5749926 -178538736 - AluJo SINE Alu -189 123 1 331 214 60 0 chr4 5749968 5750052 -178538610 - MER20 DNA MER1_type -12 207 119 875 234 5 0 chr4 5750077 5750291 -178538371 + L1MA4 LINE L1 6071 6285 -15 33 0 0 0 chr4 5750298 5750331 -178538331 + AT_rich Low_complexity Low_complexity 1 33 0 288 194 32 16 chr4 5750331 5750393 -178538269 - MER20 DNA MER1_type -152 67 5 29 0 0 0 chr4 5750591 5750620 -178538042 + AT_rich Low_complexity Low_complexity 1 29 0 554 297 76 34 chr4 5750652 5751151 -178537511 + L1ME4a LINE L1 5578 6097 -24 239 286 43 0 chr4 5752237 5752307 -178536355 + MIR SINE MIR 117 189 -73 1477 268 90 39 chr4 5752484 5753048 -178535614 + MLT1E LTR MaLR 1 593 0 1764 144 25 9 chr4 5753093 5753166 -178535496 - MER2 DNA MER2_type 0 345 275 2243 114 3 13 chr4 5753166 5753481 -178535181 + AluSx SINE Alu 1 312 0 1764 144 25 9 chr4 5753481 5753726 -178534936 - MER2 DNA MER2_type -70 275 22 1060 293 157 39 chr4 5753728 5754878 -178533784 + L2 LINE L2 2006 3308 -5 225 250 19 0 chr4 5754878 5754930 -178533732 + GA-rich Low_complexity Low_complexity 1 53 0 1402 249 99 43 chr4 5754982 5755495 -178533167 + MLT1H1 LTR MaLR 14 555 0 293 265 20 20 chr4 5755496 5755598 -178533064 + L2 LINE L2 2291 2392 -922 1361 193 68 0 chr4 5755714 5756035 -178532627 + L1MB3 LINE L1 5839 6181 -2 21 26 0 26 chr4 5756864 5756881 -178531781 + AT_rich Low_complexity Low_complexity 1 17 -21 2119 118 0 3 chr4 5756881 5757168 -178531494 + AluSx SINE Alu 1 286 -26 21 26 0 26 chr4 5757168 5757189 -178531473 + AT_rich Low_complexity Low_complexity 17 38 0 248 284 95 14 chr4 5757326 5757400 -178531262 + L2 LINE L2 3188 3267 -5 394 281 98 66 chr4 5757891 5758318 -178530344 + L2 LINE L2 2553 3008 -264 249 105 0 0 chr4 5758406 5758444 -178530218 + MLT1J1 LTR MaLR 71 108 -338 422 308 60 34 chr4 5758464 5758730 -178529932 + MLT1J LTR MaLR 237 509 -2 328 306 96 25 chr4 5758816 5758973 -178529689 + L2 LINE L2 3097 3264 -8 2396 154 16 34 chr4 5759054 5759117 -178529545 + L1PA16 LINE L1 5724 5787 -379 1765 137 10 58 chr4 5759117 5759245 -178529417 + AluJo SINE Alu 6 139 -173 2072 108 0 17 chr4 5759245 5759540 -178529122 + AluSq SINE Alu 1 290 -23 1765 137 10 58 chr4 5759540 5759724 -178528938 + AluJo SINE Alu 139 303 -9 2396 154 16 34 chr4 5759724 5760108 -178528554 + L1PA16 LINE L1 5787 6163 -3 191 88 29 0 chr4 5761346 5761380 -178527282 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 469 248 0 54 chr4 5761399 5761548 -178527114 + L1ME4a LINE L1 5965 6105 -16 2072 103 7 10 chr4 5761884 5762184 -178526478 + AluSx SINE Alu 1 299 -13 351 0 0 0 chr4 5762213 5762252 -178526410 + (GA)n Simple_repeat Simple_repeat 1 39 0 244 277 12 12 chr4 5762258 5762341 -178526321 + L1ME LINE L1 5741 5823 -298 1763 168 3 0 chr4 5762379 5762688 -178525974 - AluJo SINE Alu -2 310 1 243 305 84 0 chr4 5762909 5763004 -178525658 - MER112 DNA MER1_type -131 129 27 1969 69 76 4 chr4 5763191 5763467 -178525195 + AluY SINE Alu 1 296 -15 1480 181 0 22 chr4 5763521 5763836 -178524826 - AluJo SINE Alu -1 311 4 221 224 94 47 chr4 5763931 5764016 -178524646 - MIR3 SINE MIR -7 201 113 * 430 294 87 0 chr4 5764000 5764126 -178524536 + MIR SINE MIR 28 164 -98 2091 117 0 0 chr4 5764128 5764448 -178524214 + AluSg SINE Alu 1 320 0 456 19 0 0 chr4 5764449 5764502 -178524160 + (CA)n Simple_repeat Simple_repeat 2 54 0 515 233 57 62 chr4 5764660 5764836 -178523826 - MIR3 SINE MIR -4 204 30 615 274 65 47 chr4 5766089 5766366 -178522296 + MLT1L LTR MaLR 201 482 -133 187 248 22 146 chr4 5766368 5766505 -178522157 - MIR SINE MIR -141 121 2 213 39 0 0 chr4 5767702 5767728 -178520934 + (TG)n Simple_repeat Simple_repeat 1 26 0 2176 94 3 10 chr4 5767736 5768043 -178520619 - AluSg SINE Alu -5 305 1 281 297 94 23 chr4 5768275 5768403 -178520259 + MER34B LTR ERV1 23 159 -406 553 261 42 50 chr4 5768515 5768756 -178519906 + MER34B LTR ERV1 324 562 -3 225 109 0 109 chr4 5768757 5768803 -178519859 - MIR SINE MIR -115 147 107 260 279 38 0 chr4 5769271 5769350 -178519312 + MER117 DNA MER1_type 59 140 -57 423 280 143 23 chr4 5769669 5769844 -178518818 + MIR SINE MIR 57 252 -10 189 293 35 0 chr4 5769855 5769913 -178518749 - L2 LINE L2 0 3272 3213 235 306 42 0 chr4 5769946 5770018 -178518644 - MIR SINE MIR -10 252 178 397 281 169 47 chr4 5770201 5770521 -178518141 + L1ME4a LINE L1 5747 6105 -16 3059 151 27 23 chr4 5770526 5770710 -178517952 + L1MB2 LINE L1 5606 5788 -383 2559 112 112 109 chr4 5770710 5771372 -178517290 - MER4A LTR ERV1 0 664 1 3059 151 27 23 chr4 5771372 5771751 -178516911 + L1MB2 LINE L1 5788 6171 0 302 328 25 8 chr4 5772423 5772545 -178516117 + L2 LINE L2 2670 2793 -521 668 303 78 18 chr4 5772549 5772767 -178515895 - MIR SINE MIR -9 253 23 1892 176 37 29 chr4 5773292 5773510 -178515152 - MLT1B LTR MaLR -11 379 155 2019 130 7 0 chr4 5773510 5773809 -178514853 + AluSq SINE Alu 1 301 -12 1892 176 37 29 chr4 5773809 5773966 -178514696 - MLT1B LTR MaLR -235 155 1 510 313 72 15 chr4 5774085 5774350 -178514312 - MARNA DNA Mariner -230 356 77 230 271 0 0 chr4 5774361 5774409 -178514253 + MIR SINE MIR 86 133 -75 760 176 0 61 chr4 5774414 5774579 -178514083 + L1MA9 LINE L1 5814 5968 -344 872 163 17 22 chr4 5774579 5774757 -178513905 + FRAM SINE Alu 1 176 0 1393 190 57 10 chr4 5774763 5775063 -178513599 + L1MA9 LINE L1 5959 6272 -40 545 217 34 63 chr4 5775346 5775521 -178513141 + L1MB8 LINE L1 6004 6173 -5 1878 218 35 2 chr4 5776053 5776485 -178512177 + L1MB3 LINE L1 4829 5274 -872 1329 166 16 4 chr4 5776484 5776731 -178511931 - L1MB3 LINE L1 -235 5948 5699 * 4521 157 37 37 chr4 5776732 5776769 -178511893 + L1MB3 LINE L1 5263 5299 -884 1896 132 3 3 chr4 5776769 5777058 -178511604 + AluSq SINE Alu 1 289 -24 4521 157 37 37 chr4 5777058 5777939 -178510723 + L1MB3 LINE L1 5298 6181 -2 546 120 0 0 chr4 5777963 5778038 -178510624 + AluJ/FLAM SINE Alu 3 77 -235 22 56 0 0 chr4 5778061 5778097 -178510565 + AT_rich Low_complexity Low_complexity 1 36 0 248 304 76 0 chr4 5778130 5778209 -178510453 + L2 LINE L2 3168 3252 -20 1973 108 11 3 chr4 5778341 5778628 -178510034 + AluSp SINE Alu 1 289 -24 392 182 3 85 chr4 5778633 5778754 -178509908 + L1MD3 LINE L1 7660 7789 -206 1917 141 0 16 chr4 5778754 5779060 -178509602 - AluSx SINE Alu -11 301 1 392 182 3 85 chr4 5779060 5779079 -178509583 + L1MD3 LINE L1 7789 7995 0 1014 199 16 0 chr4 5779832 5780018 -178508644 - MER5A DNA MER1_type 0 189 1 230 328 0 0 chr4 5780146 5780207 -178508455 - L2 LINE L2 -2 3311 3251 326 292 76 7 chr4 5780289 5780433 -178508229 + HAL1b LINE L1 397 550 -798 723 240 35 58 chr4 5780460 5780718 -178507944 - L2 LINE L2 -4 3309 3058 2122 115 0 0 chr4 5781071 5781367 -178507295 + AluSx SINE Alu 1 296 -16 2022 122 3 3 chr4 5781607 5781903 -178506759 + AluSq SINE Alu 1 296 -17 611 271 101 95 chr4 5781949 5782382 -178506280 + L1MEc LINE L1 2105 2489 -3726 2232 52 21 7 chr4 5782382 5782671 -178505991 + AluY SINE Alu 2 294 -17 611 271 101 95 chr4 5782671 5782715 -178505947 + L1MEc LINE L1 2489 2531 -3684 243 170 0 0 chr4 5782733 5782780 -178505882 + (TA)n Simple_repeat Simple_repeat 2 48 0 226 292 0 0 chr4 5782781 5782870 -178505792 - L1MC4 LINE L1 -1340 6702 6614 302 341 0 0 chr4 5782870 5782952 -178505710 + L1MC4 LINE L1 6622 6703 -1339 * 382 272 0 22 chr4 5782904 5782996 -178505666 - L1MC4 LINE L1 -1339 6703 6614 * 394 300 0 0 chr4 5782964 5783054 -178505608 + L1MC4 LINE L1 6614 6703 -1339 837 121 0 0 chr4 5783055 5783179 -178505483 - AluSp/q SINE Alu -14 299 176 346 327 119 0 chr4 5783225 5783393 -178505269 + L1MEc LINE L1 2627 2814 -3401 795 226 40 32 chr4 5783395 5783627 -178505035 + MIR SINE MIR 23 261 -1 382 340 47 0 chr4 5783805 5783955 -178504707 - L3 LINE CR1 -15 1562 1406 938 116 0 0 chr4 5783968 5784173 -178504489 - AluSx SINE Alu 0 356 152 1062 159 0 53 chr4 5784176 5784402 -178504260 + AluJo SINE Alu 97 310 -2 259 286 132 22 chr4 5784592 5784683 -178503979 + L2 LINE L2 3164 3264 -49 1123 75 20 0 chr4 5784715 5784862 -178503800 - AluSx SINE Alu -162 150 1 210 118 0 0 chr4 5784957 5784991 -178503671 + (TCCA)n Simple_repeat Simple_repeat 1 34 0 470 304 120 0 chr4 5785002 5785193 -178503469 - L2 LINE L2 0 3313 3100 185 244 0 0 chr4 5785453 5785494 -178503168 - L3 LINE CR1 -582 995 955 214 310 86 52 chr4 5785505 5785679 -178502983 - L3 LINE CR1 -1133 444 265 199 239 0 22 chr4 5785919 5785965 -178502697 - MIR SINE MIR -63 145 101 332 278 18 71 chr4 5786129 5786298 -178502364 + L2 LINE L2 2305 2464 -850 360 64 0 0 chr4 5786333 5786380 -178502282 + (TGGA)n Simple_repeat Simple_repeat 4 50 0 282 56 0 0 chr4 5786497 5786533 -178502129 + (GGAGAA)n Simple_repeat Simple_repeat 5 40 0 1870 119 44 10 chr4 5786552 5786847 -178501815 + AluSx SINE Alu 1 305 -7 210 145 0 48 chr4 5786857 5786919 -178501743 + (GGGAGA)n Simple_repeat Simple_repeat 3 61 0 * 310 200 24 41 chr4 5786913 5787001 -178501661 + GA-rich Low_complexity Low_complexity 1 86 -81 2267 102 0 0 chr4 5787001 5787306 -178501356 + AluSg SINE Alu 1 305 -5 310 200 24 41 chr4 5787306 5787387 -178501275 + GA-rich Low_complexity Low_complexity 86 167 0 292 227 19 143 chr4 5787897 5788052 -178500610 - MIR SINE MIR -44 164 28 1518 190 13 3 chr4 5788213 5788513 -178500149 + AluJo SINE Alu 1 303 -9 220 240 29 29 chr4 5790194 5790298 -178498364 + (CCCG)n Simple_repeat Simple_repeat 2 105 0 562 204 68 34 chr4 5791114 5791261 -178497401 + MER45A DNA AcHobo 27 178 0 300 257 83 76 chr4 5791350 5791494 -178497168 - L2 LINE L2 0 3313 3169 198 0 0 0 chr4 5791686 5791708 -178496954 + (TTTC)n Simple_repeat Simple_repeat 2 23 0 1610 155 7 40 chr4 5791710 5792014 -178496648 - AluJo SINE Alu -18 294 1 506 240 154 0 chr4 5792149 5792324 -178496338 + MLT1J1 LTR MaLR 238 439 -7 1870 112 14 11 chr4 5792434 5792719 -178495943 - AluSg SINE Alu -24 286 1 1880 93 17 42 chr4 5792814 5793103 -178495559 + AluSx SINE Alu 21 302 -10 5418 50 19 0 chr4 5793451 5794126 -178494536 - L1PA5 LINE L1 0 6154 5467 1551 118 0 65 chr4 5794308 5794630 -178494032 - AluSg SINE Alu -9 301 1 1796 237 24 26 chr4 5794633 5795101 -178493561 - MLT1C LTR MaLR 0 467 1 2674 142 19 54 chr4 5795109 5795234 -178493428 + L1MA8 LINE L1 5719 5847 -444 1666 159 3 41 chr4 5795234 5795378 -178493284 + AluJb SINE Alu 1 149 -163 1976 78 103 4 chr4 5795378 5795659 -178493003 + AluSp SINE Alu 2 310 -3 1666 159 3 41 chr4 5795659 5795829 -178492833 + AluJb SINE Alu 149 303 -9 2674 142 19 54 chr4 5795829 5796224 -178492438 + L1MA8 LINE L1 5847 6221 -70 7558 111 54 11 chr4 5796229 5797385 -178491277 - HSMAR2 DNA Mariner -5 1297 93 309 262 123 41 chr4 5797898 5798020 -178490642 - MIR SINE MIR -7 255 124 760 129 313 0 chr4 5798025 5798172 -178490490 - MER46A DNA MER2_type 0 236 44 198 274 39 0 chr4 5798194 5798245 -178490417 - MIR SINE MIR -165 97 45 23 0 0 0 chr4 5798502 5798525 -178490137 + AT_rich Low_complexity Low_complexity 1 23 0 873 136 8 0 chr4 5799100 5799232 -178489430 + FLAM_A SINE Alu 1 133 0 212 331 58 52 chr4 5799423 5799595 -178489067 - L2 LINE L2 -3061 253 81 1131 183 0 24 chr4 5800396 5800609 -178488053 + AluJo SINE Alu 85 292 -20 1817 146 3 13 chr4 5801707 5802008 -178486654 + AluJb SINE Alu 1 298 -14 375 297 65 7 chr4 5802016 5802171 -178486491 + L1ME4a LINE L1 5956 6119 -2 357 282 35 7 chr4 5802260 5802402 -178486260 + L1MC4a LINE L1 5753 5898 -1910 892 253 80 118 chr4 5802407 5803043 -178485619 + L1ME3A LINE L1 5559 6170 0 2085 107 3 28 chr4 5803750 5804068 -178484594 + AluSp SINE Alu 1 310 -3 544 276 144 0 chr4 5804628 5804802 -178483860 + MIR SINE MIR 13 211 -51 2018 119 3 19 chr4 5804850 5805162 -178483500 - AluSx SINE Alu -5 307 1 380 201 166 14 chr4 5805269 5805408 -178483254 + MER106B DNA MER1_type 865 1024 -35 292 43 109 0 chr4 5805401 5805447 -178483215 - MER106A DNA MER1_type -13 223 173 * 2207 98 0 0 chr4 5805478 5805773 -178482889 - AluSq SINE Alu -18 295 1 226 271 224 28 chr4 5805819 5805926 -178482736 - MER5B DNA MER1_type 0 178 51 2362 45 0 10 chr4 5806045 5806336 -178482326 - AluY SINE Alu -23 288 1 193 294 0 0 chr4 5806714 5806765 -178481897 + MIR SINE MIR 59 109 -99 1847 131 13 23 chr4 5807148 5807453 -178481209 + AluJb SINE Alu 1 302 -10 516 126 0 0 chr4 5808632 5808719 -178479943 - L1MA9 LINE L1 0 6312 6226 279 157 0 0 chr4 5808730 5808781 -178479881 + (TA)n Simple_repeat Simple_repeat 2 52 0 1147 135 53 55 chr4 5808781 5809020 -178479642 - L1MA9 LINE L1 -15 6285 6007 191 175 79 79 chr4 5809024 5809087 -178479575 + L2 LINE L2 3202 3264 -8 2039 77 0 58 chr4 5809708 5810018 -178478644 - AluSg SINE Alu -18 292 1 286 236 89 102 chr4 5810060 5810217 -178478445 + MIR3 SINE MIR 36 190 -18 362 279 127 35 chr4 5810651 5810848 -178477814 - L1MC/D LINE L1 -2018 5790 5576 300 266 65 81 chr4 5811970 5812094 -178476568 - L2 LINE L2 -14 3258 3137 181 200 25 0 chr4 5812137 5812177 -178476485 - L2 LINE L2 -1 3271 3231 2033 106 23 0 chr4 5812466 5812769 -178475893 + AluSg SINE Alu 1 310 0 186 103 0 0 chr4 5812891 5812920 -178475742 + (T)n Simple_repeat Simple_repeat 1 29 0 2050 114 3 43 chr4 5813346 5813670 -178474992 + AluSq SINE Alu 1 311 -2 326 289 250 19 chr4 5813814 5814022 -178474640 + MIR SINE MIR 7 262 0 921 253 37 17 chr4 5814614 5814855 -178473807 + MIR SINE MIR 17 262 0 22 0 0 0 chr4 5814893 5814915 -178473747 + AT_rich Low_complexity Low_complexity 1 22 0 363 169 26 39 chr4 5815027 5815104 -178473558 + MIR SINE MIR 187 262 0 1403 80 0 50 chr4 5815275 5815476 -178473186 - AluSc SINE Alu -12 297 107 2625 36 0 0 chr4 5815477 5815786 -178472876 - AluY SINE Alu -2 309 1 312 240 69 98 chr4 5815786 5815990 -178472672 - L1MC/D LINE L1 -515 5606 5409 3098 77 47 12 chr4 5816429 5816821 -178471841 + MLT2A1 LTR ERVL 1 411 -33 441 95 0 0 chr4 5816821 5816884 -178471778 + (TA)n Simple_repeat Simple_repeat 1 63 0 3098 77 47 12 chr4 5816884 5816920 -178471742 + MLT2A1 LTR ERVL 411 444 0 779 161 0 0 chr4 5816963 5817081 -178471581 + FLAM_C SINE Alu 1 118 -15 198 103 0 0 chr4 5817084 5817113 -178471549 + (TAA)n Simple_repeat Simple_repeat 3 31 0 275 311 19 0 chr4 5817284 5817390 -178471272 + LTR16C LTR ERVL 17 124 -367 2155 168 73 36 chr4 5818228 5818669 -178469993 - LTR32 LTR ERVL 0 471 15 632 253 104 22 chr4 5818672 5818854 -178469808 + MIR SINE MIR 47 243 -19 380 264 11 0 chr4 5819067 5819154 -178469508 - MIR SINE MIR -60 202 115 2172 107 0 0 chr4 5819430 5819728 -178468934 + AluSx SINE Alu 1 298 -14 648 174 0 3 chr4 5819728 5819843 -178468819 - LTR18A LTR ERVL -6 351 248 703 291 61 5 chr4 5819996 5820192 -178468470 - LTR18A LTR ERVL -147 210 4 398 272 48 48 chr4 5820305 5820452 -178468210 - MER117 DNA MER1_type -49 148 2 3973 99 5 0 chr4 5820669 5821224 -178467438 + L1PA10 LINE L1 5611 6168 0 2116 113 7 0 chr4 5821312 5821622 -178467040 + AluSp SINE Alu 2 313 0 2231 100 7 0 chr4 5821815 5822125 -178466537 + AluSx SINE Alu 1 312 0 285 291 75 15 chr4 5823309 5823443 -178465219 + L1ME3A LINE L1 5524 5665 -497 225 0 0 0 chr4 5823527 5823552 -178465110 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 2097 100 0 0 chr4 5823552 5823832 -178464830 - AluSx SINE Alu -32 280 1 1648 152 0 55 chr4 5823832 5824142 -178464520 - AluJo SINE Alu -14 298 6 554 219 34 0 chr4 5824171 5824290 -178464372 + L1ME3A LINE L1 5850 5972 -198 245 189 344 0 chr4 5824297 5824387 -178464275 + L1ME3A LINE L1 6042 6162 -8 210 289 0 106 chr4 5824763 5824867 -178463795 - MIR SINE MIR -132 130 38 197 33 33 0 chr4 5825346 5825376 -178463286 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1534 133 47 36 chr4 5825378 5825656 -178463006 - AluJo SINE Alu -23 289 9 2373 74 0 3 chr4 5825724 5826036 -178462626 + AluY SINE Alu 1 311 0 2092 92 3 3 chr4 5826798 5827138 -178461524 - AluSp SINE Alu 0 340 1 2142 117 10 0 chr4 5827434 5827743 -178460919 - AluSx SINE Alu 0 312 1 2465 102 36 28 chr4 5828706 5829067 -178459595 + THE1B LTR MaLR 1 364 0 336 298 258 25 chr4 5829362 5829560 -178459102 - MIR SINE MIR -9 253 10 1875 124 34 0 chr4 5830282 5830573 -178458089 + AluSx SINE Alu 1 301 -11 21 0 0 0 chr4 5831636 5831657 -178457005 + AT_rich Low_complexity Low_complexity 1 21 0 2284 198 77 73 chr4 5832040 5832797 -178455865 + L1MD1 LINE L1 14 5423 -1117 732 190 28 0 chr4 5832811 5832953 -178455709 + L1MA9 LINE L1 6108 6253 -59 1414 178 69 4 chr4 5832953 5833229 -178455433 + AluJo SINE Alu 1 294 -18 180 0 0 0 chr4 5833285 5833305 -178455357 + (A)n Simple_repeat Simple_repeat 1 20 0 3777 191 51 72 chr4 5833325 5833898 -178454764 + L1MD1 LINE L1 5437 6020 -616 5536 101 25 6 chr4 5833898 5834701 -178453961 - L1MA2 LINE L1 0 6304 5487 3777 191 51 72 chr4 5834701 5835338 -178453324 + L1MD1 LINE L1 6020 6628 -8 1445 125 32 39 chr4 5835362 5835643 -178453019 - Tigger7 DNA MER2_type 0 2487 2209 557 163 0 0 chr4 5835651 5835737 -178452925 - Tigger7 DNA MER2_type -387 163 78 535 236 0 0 chr4 5836460 5836570 -178452092 - FRAM SINE Alu -67 109 1 2068 122 0 0 chr4 5836971 5837275 -178451387 + AluSx SINE Alu 1 304 -8 182 204 0 19 chr4 5837613 5837667 -178450995 + CT-rich Low_complexity Low_complexity 3 55 0 504 309 52 14 chr4 5838136 5838348 -178450314 + MIR SINE MIR 21 248 -14 906 188 14 29 chr4 5838466 5838674 -178449988 - AluJb SINE Alu -9 303 99 2140 110 0 0 chr4 5838738 5839028 -178449634 - AluSx SINE Alu -22 290 1 195 264 75 0 chr4 5839256 5839309 -178449353 + MIR SINE MIR 50 106 -156 1001 90 0 0 chr4 5839463 5839597 -178449065 + AluSp/q SINE Alu 171 304 -9 2079 114 0 3 chr4 5839608 5839905 -178448757 + AluSx SINE Alu 1 296 -16 2091 112 0 0 chr4 5840093 5840378 -178448284 - AluSx SINE Alu -24 288 4 180 332 127 9 chr4 5840577 5840806 -178447856 + L2 LINE L2 2999 3254 -59 235 200 52 13 chr4 5841643 5841758 -178446904 + L2 LINE L2 3101 3272 0 * 486 265 15 22 chr4 5841757 5841893 -178446769 - MIR SINE MIR -108 154 20 1877 137 3 29 chr4 5842077 5842390 -178446272 + AluSx SINE Alu 1 305 -7 2885 179 39 20 chr4 5842937 5843581 -178445081 + L1 LINE L1 4104 4759 -1387 2020 95 51 3 chr4 5844359 5844655 -178444007 - AluSg SINE Alu 0 310 1 2043 93 0 0 chr4 5846215 5846485 -178442177 - AluSg SINE Alu -40 270 1 1065 221 55 0 chr4 5847006 5847223 -178441439 - MIR SINE MIR -3 259 31 2326 63 3 16 chr4 5849683 5849998 -178438664 - AluY SINE Alu 0 311 1 299 267 110 20 chr4 5850583 5850729 -178437933 - MIR SINE MIR -60 202 44 195 297 144 8 chr4 5851130 5851248 -178437414 + MIR SINE MIR 79 212 -50 2223 111 0 0 chr4 5851524 5851831 -178436831 - AluSx SINE Alu -5 307 1 264 291 36 45 chr4 5851960 5852070 -178436592 + MIR3 SINE MIR 85 193 -15 306 244 39 0 chr4 5852194 5852272 -178436390 - MIR SINE MIR -70 192 112 249 197 14 113 chr4 5852336 5852407 -178436255 - L2 LINE L2 -20 3252 3189 653 253 96 35 chr4 5852505 5852734 -178435928 - MIR SINE MIR -8 254 12 454 143 220 0 chr4 5852826 5852917 -178435745 + MER81 DNA DNA 4 114 0 553 260 33 20 chr4 5853852 5854002 -178434660 + MIR SINE MIR 108 259 -3 302 211 14 56 chr4 5854000 5854071 -178434591 + L2 LINE L2 3246 3313 0 * 1877 140 31 63 chr4 5854188 5854539 -178434123 - MLT1B LTR MaLR 0 390 51 208 290 122 19 chr4 5854765 5854872 -178433790 + L2 LINE L2 2965 3082 -190 882 97 0 62 chr4 5854893 5855037 -178433625 + AluSc SINE Alu 1 135 -174 1962 122 0 26 chr4 5855038 5855341 -178433321 + AluSx SINE Alu 4 298 -14 354 282 154 26 chr4 5855367 5855484 -178433178 + L2 LINE L2 3139 3270 -2 359 155 19 126 chr4 5856056 5856159 -178432503 - MIR3 SINE MIR -5 203 112 443 289 10 0 chr4 5856161 5856265 -178432397 - L2 LINE L2 -2 3270 3166 294 172 11 151 chr4 5856475 5856568 -178432094 + MIR SINE MIR 11 90 -172 929 241 49 0 chr4 5856582 5856785 -178431877 - MLT1H1 LTR MaLR 0 555 343 539 292 82 18 chr4 5856826 5857045 -178431617 - MLT1H1 LTR MaLR -316 239 7 581 177 161 0 chr4 5857053 5857177 -178431485 + MIR SINE MIR 118 261 -1 1956 123 7 0 chr4 5857415 5857699 -178430963 - AluSx SINE Alu -26 286 1 465 19 0 0 chr4 5857917 5857971 -178430691 + (TG)n Simple_repeat Simple_repeat 2 55 0 520 304 117 26 chr4 5857995 5858172 -178430490 + MIR SINE MIR 6 210 -52 1748 146 80 50 chr4 5858172 5858536 -178430126 - THE1C LTR MaLR 0 375 1 520 304 117 26 chr4 5858536 5858588 -178430074 + MIR SINE MIR 210 256 -6 2306 126 27 36 chr4 5859353 5859718 -178428944 + THE1B LTR MaLR 3 364 0 2150 113 3 0 chr4 5860112 5860423 -178428239 - AluSx SINE Alu 0 312 1 1570 188 41 3 chr4 5860556 5860848 -178427814 + AluJo SINE Alu 1 303 -9 342 250 86 17 chr4 5860983 5861099 -178427563 + MER5A DNA MER1_type 38 161 -28 396 255 301 0 chr4 5861108 5861261 -178427401 - MIR SINE MIR -15 247 49 1816 149 3 14 chr4 5861483 5861772 -178426890 - AluJb SINE Alu -21 291 6 375 220 120 10 chr4 5861954 5862054 -178426608 + L2 LINE L2 3171 3281 -32 438 247 320 1 chr4 5862100 5862340 -178426322 + L2 LINE L2 2745 3045 -268 22 0 0 0 chr4 5862554 5862576 -178426086 + AT_rich Low_complexity Low_complexity 1 22 0 690 190 71 11 chr4 5862636 5862797 -178425865 - MER3 DNA MER1_type -65 144 5 378 0 0 0 chr4 5862825 5862867 -178425795 + (TG)n Simple_repeat Simple_repeat 1 42 0 25 0 0 0 chr4 5863650 5863675 -178424987 + AT_rich Low_complexity Low_complexity 1 25 0 922 140 0 0 chr4 5863711 5863854 -178424808 + FRAM SINE Alu 22 164 -12 249 140 0 0 chr4 5866783 5866840 -178421822 + (TC)n Simple_repeat Simple_repeat 2 58 0 2120 99 27 0 chr4 5867284 5867577 -178421085 - AluSx SINE Alu -11 301 1 732 241 141 0 chr4 5867726 5867917 -178420745 + Charlie1 DNA MER1_type 2 219 -2542 732 190 36 0 chr4 5867911 5868048 -178420614 + Charlie1 DNA MER1_type 2620 2761 0 42 20 0 0 chr4 5868203 5868252 -178420410 + AT_rich Low_complexity Low_complexity 1 49 0 213 290 43 0 chr4 5869731 5869800 -178418862 - L2 LINE L2 0 3272 3201 883 226 49 25 chr4 5870420 5870663 -178417999 + MIR SINE MIR 2 250 -12 309 248 34 39 chr4 5870815 5870918 -178417744 + MIR SINE MIR 87 191 -62 417 206 46 122 chr4 5871073 5871141 -178417521 - MER5B DNA MER1_type -55 123 51 207 0 0 0 chr4 5871141 5871164 -178417498 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2006 104 0 4 chr4 5871166 5871445 -178417217 - AluSg SINE Alu -32 278 1 417 206 46 122 chr4 5871445 5871504 -178417158 - MER5B DNA MER1_type -128 50 3 197 311 22 11 chr4 5872576 5872666 -178415996 + L3 LINE CR1 1268 1358 -219 503 308 92 25 chr4 5873326 5873566 -178415096 + MIR SINE MIR 7 262 0 2347 65 0 32 chr4 5873580 5873890 -178414772 - AluY SINE Alu -11 300 1 245 167 0 0 chr4 5876867 5876909 -178411753 + MER94 DNA DNA 70 111 -23 255 330 126 10 chr4 5876960 5877063 -178411599 - L2 LINE L2 -2 3270 3156 2040 129 0 3 chr4 5877441 5877750 -178410912 - AluSx SINE Alu -4 308 1 385 304 50 12 chr4 5877879 5878040 -178410622 + MIR SINE MIR 90 256 -6 289 363 40 0 chr4 5879198 5879322 -178409340 - L2 LINE L2 -3 3269 3141 769 143 75 8 chr4 5879977 5880110 -178408552 + AluSg/x SINE Alu 144 285 -27 1394 180 54 14 chr4 5880400 5880694 -178407968 - L1MB7 LINE L1 -9 6175 5870 309 194 16 0 chr4 5880699 5880761 -178407901 - L1MB7 LINE L1 -473 5705 5643 2091 107 30 3 chr4 5881412 5881712 -178406950 + AluSx SINE Alu 1 308 -4 1811 152 16 10 chr4 5881961 5882271 -178406391 - AluJo SINE Alu 0 312 1 1563 147 15 4 chr4 5882617 5882876 -178405786 + AluSx SINE Alu 1 262 -50 1571 117 0 25 chr4 5882882 5883121 -178405541 + AluSq SINE Alu 29 261 -52 842 168 173 11 chr4 5883518 5883697 -178404965 + AluJo SINE Alu 85 292 -20 195 293 103 60 chr4 5884990 5885106 -178403556 + MIR SINE MIR 31 151 -111 683 279 202 70 chr4 5885963 5886045 -178402617 + L2 LINE L2 1334 1404 -1910 1998 116 36 0 chr4 5886045 5886346 -178402316 + AluSx SINE Alu 1 312 0 683 279 202 70 chr4 5886346 5886552 -178402110 + L2 LINE L2 1404 1581 -1733 936 118 0 22 chr4 5886552 5886688 -178401974 - FLAM_C SINE Alu 0 133 1 683 279 202 70 chr4 5886688 5887183 -178401479 + L2 LINE L2 1581 2009 -1305 3304 136 84 4 chr4 5887183 5887720 -178400942 + LTR19B LTR ERV1 1 580 0 683 279 202 70 chr4 5887720 5887939 -178400723 + L2 LINE L2 2009 2471 -843 1920 130 24 0 chr4 5888111 5888404 -178400258 + AluSg SINE Alu 1 300 -10 246 337 74 0 chr4 5888670 5888765 -178399897 + MIR SINE MIR 38 139 -69 186 259 0 56 chr4 5888916 5888970 -178399692 - MIR3 SINE MIR -7 201 151 301 289 141 15 chr4 5888988 5889123 -178399539 - MER5A DNA MER1_type -29 160 9 189 226 226 0 chr4 5889131 5889184 -178399478 - MIR3 SINE MIR -48 160 96 461 287 71 10 chr4 5889192 5889392 -178399270 - MIR SINE MIR 0 262 48 1523 168 10 24 chr4 5889566 5889857 -178398805 - AluJb SINE Alu -25 287 1 859 133 0 0 chr4 5889867 5889995 -178398667 - FLAM_C SINE Alu -15 128 1 216 0 0 0 chr4 5890222 5890246 -178398416 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1956 53 3 86 chr4 5890249 5890552 -178398110 - AluY SINE Alu -32 279 2 830 174 25 0 chr4 5891196 5891357 -178397305 + L1MB7 LINE L1 5910 6074 -110 1029 214 68 80 chr4 5891357 5891694 -178396968 + MLT1B LTR MaLR 1 359 -108 1431 191 37 0 chr4 5891694 5891966 -178396696 - AluJo SINE Alu -30 282 1 1029 214 68 80 chr4 5891966 5892071 -178396591 + MLT1B LTR MaLR 359 464 -3 677 153 0 0 chr4 5892071 5892182 -178396480 + L1MB4 LINE L1 6067 6177 -3 210 186 0 47 chr4 5892197 5892240 -178396422 + MIR SINE MIR 154 194 -68 1233 116 0 0 chr4 5892421 5892594 -178396068 - AluSg/x SINE Alu -7 305 133 319 248 152 16 chr4 5892745 5892870 -178395792 + MIR SINE MIR 85 226 -36 282 363 18 9 chr4 5892919 5893032 -178395630 + L2 LINE L2 3197 3310 -3 2357 176 19 26 chr4 5893128 5893529 -178395133 + MLT1C LTR MaLR 1 400 -67 2326 75 0 0 chr4 5893529 5893823 -178394839 - AluY SINE Alu -17 294 1 2357 176 19 26 chr4 5893823 5893888 -178394774 + MLT1C LTR MaLR 400 464 -3 804 203 49 93 chr4 5894874 5895120 -178393542 + MLT1B LTR MaLR 1 235 -155 * 1310 194 113 76 chr4 5895119 5895295 -178393367 + MLT1C LTR MaLR 18 186 -281 1485 181 41 0 chr4 5895295 5895566 -178393096 - AluJo SINE Alu -28 284 3 1310 194 113 76 chr4 5895566 5895823 -178392839 + MLT1C LTR MaLR 186 467 0 1852 139 31 0 chr4 5896111 5896399 -178392263 + AluSq SINE Alu 1 297 -16 225 281 31 0 chr4 5896707 5896771 -178391891 + MIR SINE MIR 65 130 -78 1769 126 7 25 chr4 5896805 5897091 -178391571 + AluJb SINE Alu 7 287 -25 765 221 0 54 chr4 5897623 5897809 -178390853 + L1M3 LINE L1 5429 5596 -575 7168 102 18 11 chr4 5897814 5898814 -178389848 - LTR13 LTR ERVK 0 1007 1 2196 119 0 0 chr4 5898839 5899150 -178389512 + AluSx SINE Alu 1 311 -1 1383 93 31 0 chr4 5899188 5899382 -178389280 + AluSq SINE Alu 1 200 -113 25 51 0 0 chr4 5899389 5899428 -178389234 + AT_rich Low_complexity Low_complexity 1 39 0 1403 145 0 0 chr4 5899464 5899678 -178388984 - AluSg/x SINE Alu -16 296 83 451 226 0 0 chr4 5899883 5899967 -178388695 - PABL_B-int LTR ERV1 -449 6673 6590 1948 179 21 6 chr4 5899970 5900300 -178388362 + LTR32 LTR ERVL 14 348 -123 2128 112 3 0 chr4 5900303 5900599 -178388063 - AluSp SINE Alu -16 297 1 810 172 26 13 chr4 5900622 5900773 -178387889 + LTR32 LTR ERVL 319 471 0 690 335 37 41 chr4 5900839 5901352 -178387310 - PABL_B-int LTR ERV1 -598 6524 6014 2253 101 0 0 chr4 5901425 5901733 -178386929 + AluSg SINE Alu 1 308 -2 557 215 178 0 chr4 5901733 5901980 -178386682 + LTR23-int LTR ERV1 2089 2379 -2744 2656 202 88 102 chr4 5902000 5902036 -178386626 + LTR23-int LTR ERV1 3421 3456 -2490 2107 107 0 7 chr4 5902036 5902335 -178386327 + AluSx SINE Alu 1 297 -15 2656 202 88 102 chr4 5902335 5903303 -178385359 + LTR23-int LTR ERV1 3456 4410 -1536 1389 273 37 24 chr4 5903414 5903629 -178385033 + MLT1D LTR MaLR 35 246 -259 2253 116 0 0 chr4 5903629 5903939 -178384723 + AluSx SINE Alu 1 310 -2 1389 273 37 24 chr4 5903939 5904188 -178384474 + MLT1D LTR MaLR 246 505 0 655 295 127 45 chr4 5904188 5904650 -178384012 - MLT1J LTR MaLR -7 504 5 2012 130 0 13 chr4 5904891 5905247 -178383415 - AluSx SINE Alu 0 352 1 1614 127 15 8 chr4 5905617 5905876 -178382786 - MER2 DNA MER2_type -63 282 22 1037 291 158 38 chr4 5905878 5907026 -178381636 + L2 LINE L2 2006 3308 -5 225 250 19 0 chr4 5907026 5907078 -178381584 + GA-rich Low_complexity Low_complexity 1 53 0 1542 246 99 43 chr4 5907130 5907643 -178381019 + MLT1H1 LTR MaLR 14 555 0 281 265 20 20 chr4 5907644 5907746 -178380916 + L2 LINE L2 2291 2392 -922 1392 193 51 21 chr4 5907845 5908183 -178380479 + L1MB3 LINE L1 5829 6181 -2 21 26 0 26 chr4 5909013 5909030 -178379632 + AT_rich Low_complexity Low_complexity 1 17 -21 2111 122 0 3 chr4 5909030 5909317 -178379345 + AluSx SINE Alu 1 286 -26 21 26 0 26 chr4 5909317 5909338 -178379324 + AT_rich Low_complexity Low_complexity 17 38 0 237 284 95 14 chr4 5909475 5909549 -178379113 + L2 LINE L2 3188 3267 -5 326 302 93 61 chr4 5910040 5910467 -178378195 + L2 LINE L2 2553 3008 -264 241 105 0 0 chr4 5910555 5910593 -178378069 + MLT1J1 LTR MaLR 71 108 -338 412 331 49 23 chr4 5910613 5910879 -178377783 + MLT1J LTR MaLR 237 509 -2 324 298 65 24 chr4 5910998 5911122 -178377540 + L2 LINE L2 3136 3264 -8 2274 154 16 34 chr4 5911203 5911266 -178377396 + L1PA16 LINE L1 5724 5787 -379 1936 134 10 58 chr4 5911266 5911394 -178377268 + AluJo SINE Alu 6 139 -173 2226 108 0 17 chr4 5911394 5911689 -178376973 + AluSq SINE Alu 1 290 -23 1936 134 10 58 chr4 5911689 5911873 -178376789 + AluJo SINE Alu 139 303 -9 2274 154 16 34 chr4 5911873 5912257 -178376405 + L1PA16 LINE L1 5787 6163 -3 191 88 29 0 chr4 5913495 5913529 -178375133 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 464 283 7 0 chr4 5913548 5913693 -178374969 + L1ME4a LINE L1 5965 6110 -11 2264 122 3 0 chr4 5914033 5914344 -178374318 + AluSx SINE Alu 1 312 0 2180 126 27 36 chr4 5914738 5915103 -178373559 - THE1B LTR MaLR 0 364 3 218 318 148 34 chr4 5915869 5915921 -178372741 - MIR SINE MIR -6 256 211 1591 154 80 50 chr4 5915921 5916285 -178372377 + THE1C LTR MaLR 1 375 0 218 318 148 34 chr4 5916285 5916408 -178372254 - MIR SINE MIR -51 211 61 2345 101 55 71 chr4 5916960 5917017 -178371645 + MSTC LTR MaLR 1 57 -371 832 139 16 0 chr4 5917017 5917146 -178371516 + FLAM_C SINE Alu 3 133 0 2345 101 55 71 chr4 5917146 5917523 -178371139 + MSTC LTR MaLR 57 428 0 871 196 15 35 chr4 5917819 5918018 -178370644 + MLT1D LTR MaLR 41 235 -270 208 250 18 18 chr4 5918067 5918123 -178370539 - L2 LINE L2 -97 3216 3161 236 130 22 0 chr4 5918452 5918498 -178370164 + (TTCA)n Simple_repeat Simple_repeat 1 47 0 2092 116 0 75 chr4 5918680 5919015 -178369647 - AluSx SINE Alu -2 310 1 2347 113 0 10 chr4 5919120 5919430 -178369232 - AluSx SINE Alu -5 307 1 688 138 9 0 chr4 5919443 5919552 -178369110 - AluJb SINE Alu -12 300 191 225 336 34 48 chr4 5919692 5919839 -178368823 - MER5A DNA MER1_type -28 161 6 269 301 32 0 chr4 5919888 5919981 -178368681 - MER5A DNA MER1_type -84 105 10 1974 121 69 0 chr4 5920043 5920333 -178368329 - AluSg SINE Alu 0 310 1 263 167 0 0 chr4 5920349 5920391 -178368271 - 5S rRNA rRNA -79 42 1 373 213 56 9 chr4 5920470 5920578 -178368084 - MIR SINE MIR -107 155 43 1911 67 14 25 chr4 5920690 5920973 -178367689 - L1PA7 LINE L1 -1 6153 5874 516 275 24 35 chr4 5920974 5921172 -178367490 - MIR SINE MIR -62 146 2 900 238 67 18 chr4 5921206 5921488 -178367174 - MLT1C LTR MaLR 0 467 172 841 152 22 0 chr4 5921537 5921675 -178366987 - AluJo SINE Alu -171 141 1 2308 99 3 0 chr4 5921687 5921979 -178366683 - AluSx SINE Alu -19 293 1 1090 99 0 0 chr4 5922021 5922183 -178366479 + L1PB2 LINE L1 5990 6151 0 482 287 78 62 chr4 5922376 5922634 -178366028 + L1ME LINE L1 5514 5775 -346 996 179 25 0 chr4 5922837 5923033 -178365629 + LTR48B LTR ERV1 1 201 -443 1703 124 24 3 chr4 5923034 5923325 -178365337 - LTR23 LTR ERV1 0 437 141 2149 115 0 0 chr4 5923328 5923607 -178365055 - AluSg SINE Alu -1 309 31 5380 61 103 0 chr4 5923607 5924356 -178364306 - LTR12 LTR ERV1 0 826 1 249 88 0 0 chr4 5924356 5924390 -178364272 - AluSg SINE Alu -266 34 1 569 184 82 54 chr4 5924393 5924540 -178364122 - LTR23 LTR ERV1 -286 151 1 495 216 9 26 chr4 5924661 5924777 -178363885 - LTR23-int LTR ERV1 -223 4900 4787 5128 147 28 14 chr4 5924791 5925805 -178362857 - LTR49-int LTR ERV1 -478 6120 4608 2608 41 0 0 chr4 5925811 5926104 -178362558 + AluY SINE Alu 1 293 -18 1421 113 5 0 chr4 5926205 5926391 -178362271 - AluSg SINE Alu -123 187 1 832 209 83 7 chr4 5926392 5926850 -178361812 + L1MA9 LINE L1 5661 6183 0 2161 209 36 53 chr4 5926873 5926889 -178361773 - MER92B LTR ERV1 -4 632 617 2443 82 7 0 chr4 5926889 5927183 -178361479 + AluSq SINE Alu 1 296 -17 2161 209 36 53 chr4 5927183 5927808 -178360854 - MER92B LTR ERV1 -19 617 2 202 270 11 34 chr4 5927921 5928010 -178360652 - L2 LINE L2 -188 3084 2998 323 183 11 75 chr4 5928115 5928208 -178360454 - LTR33A LTR ERVL -11 512 426 308 237 67 30 chr4 5929461 5929596 -178359066 - MER65B LTR ERV1 -391 140 1 267 236 28 0 chr4 5929674 5929746 -178358916 + MIR SINE MIR 111 184 -78 229 237 75 32 chr4 5929873 5929966 -178358696 + L2 LINE L2 3136 3232 -40 2370 99 0 7 chr4 5930250 5930554 -178358108 + AluSx SINE Alu 1 302 -10 450 143 48 0 chr4 5930748 5930832 -178357830 - AluS SINE Alu 0 309 222 939 266 41 29 chr4 5981312 5981900 -178306762 + L1M4 LINE L1 1100 1710 -4832 1166 235 65 0 chr4 5982019 5982279 -178306383 - MLT1-int LTR MaLR -139 1232 956 2387 222 4 6 chr4 5982675 5983152 -178305510 - MLT1-int LTR MaLR -1073 662 187 694 216 14 7 chr4 5984081 5984220 -178304442 + MLT1A1 LTR MaLR 225 364 -1 631 142 53 18 chr4 5984222 5984335 -178304327 + MLT1A1-int LTR MaLR 2 118 -1617 2174 137 0 15 chr4 5984613 5984955 -178303707 - MER1B DNA MER1_type 0 337 1 536 247 180 10 chr4 5985033 5985333 -178303329 - L1MEc LINE L1 -4418 1978 1628 1082 106 0 73 chr4 5985345 5985524 -178303138 + MLT2A2 LTR ERVL 1 166 -287 896 122 0 0 chr4 5985525 5985640 -178303022 - AluSq/x SINE Alu -198 115 1 283 241 13 25 chr4 5985642 5985721 -178302941 + LTR52 LTR ERVL 16 93 -328 * 704 175 0 17 chr4 5985717 5985837 -178302825 - MLT1A1 LTR MaLR -247 118 1 6897 74 26 5 chr4 5986687 5987648 -178301014 - L1PA11 LINE L1 -1 6173 5209 21 71 0 0 chr4 5987747 5987789 -178300873 + AT_rich Low_complexity Low_complexity 1 42 0 526 270 10 99 chr4 5987801 5988094 -178300568 - L2 LINE L2 -161 3152 2886 363 296 0 74 chr4 5988098 5988260 -178300402 - L2 LINE L2 -985 2329 2180 3861 53 2 0 chr4 5988623 5989096 -178299566 + L1PA8 LINE L1 5467 5940 -232 410 147 29 0 chr4 5989196 5989264 -178299398 - MLT1A2 LTR MaLR -304 70 1 363 250 31 55 chr4 5989267 5989395 -178299267 + MIR3 SINE MIR 69 193 -15 253 29 0 0 chr4 5989683 5989717 -178298945 - MIR SINE MIR -122 140 107 353 290 28 7 chr4 5989964 5990109 -178298553 + MIR3 SINE MIR 13 160 -48 211 254 0 0 chr4 5990170 5990225 -178298437 - MER5A DNA MER1_type -105 84 30 181 49 0 73 chr4 5990325 5990366 -178298296 + (CAAAAA)n Simple_repeat Simple_repeat 6 43 0 333 0 0 0 chr4 5990757 5990794 -178297868 + (CA)n Simple_repeat Simple_repeat 2 38 0 371 291 39 8 chr4 5991008 5991135 -178297527 - MIR SINE MIR -73 189 59 3121 201 55 16 chr4 5991165 5991842 -178296820 - L1MD2 LINE L1 -27 6332 5630 825 248 35 13 chr4 5991920 5992150 -178296512 - MIR SINE MIR -18 244 10 1362 306 15 11 chr4 5992179 5992647 -178296015 - L1ME3A LINE L1 -5 6165 5696 312 287 37 0 chr4 5992656 5992764 -178295898 - L1M4 LINE L1 -3289 2857 2746 1670 166 54 11 chr4 5992764 5993042 -178295620 + AluJb SINE Alu 1 290 -22 2380 107 0 0 chr4 5994357 5994666 -178293996 - AluSq SINE Alu -4 309 1 2322 99 16 0 chr4 5994674 5994977 -178293685 - AluSq SINE Alu -5 308 1 971 155 6 11 chr4 5994981 5995155 -178293507 - MLT1B LTR MaLR -217 173 1 205 62 94 0 chr4 5995283 5995315 -178293347 + L2 LINE L2 3264 3298 -15 381 282 0 9 chr4 5995389 5995499 -178293163 - MIR SINE MIR -83 125 17 236 260 78 0 chr4 5996333 5996410 -178292252 - MIR SINE MIR -72 190 108 480 257 11 73 chr4 5996493 5996561 -178292101 + MIR SINE MIR 78 149 -113 3184 102 42 86 chr4 5996561 5997152 -178291510 + MER34B LTR ERV1 1 565 0 480 257 11 73 chr4 5997152 5997262 -178291400 + MIR SINE MIR 149 245 -17 248 281 35 26 chr4 5997333 5997447 -178291215 - LTR67 LTR ERVL -17 540 426 1932 195 88 27 chr4 5997585 5998061 -178290601 - MLT1D LTR MaLR 0 505 1 887 224 0 0 chr4 5998106 5998276 -178290386 - MER5A DNA MER1_type -19 170 1 2243 224 38 19 chr4 6000236 6000763 -178287899 - MLT1F LTR MaLR 0 542 6 189 361 0 0 chr4 6001737 6001856 -178286806 + L2 LINE L2 2231 2349 -965 2675 152 16 68 chr4 6001886 6001984 -178286678 + L1MB8 LINE L1 5619 5721 -457 2020 141 27 0 chr4 6001984 6002281 -178286381 - AluSx SINE Alu -7 305 1 2675 152 16 68 chr4 6002281 6002755 -178285907 + L1MB8 LINE L1 5721 6161 -17 2132 126 20 0 chr4 6002790 6003091 -178285571 + AluSq SINE Alu 1 307 -6 581 180 0 0 chr4 6003127 6003227 -178285435 + L1M4 LINE L1 5616 5715 -463 349 293 30 30 chr4 6003346 6003479 -178285183 - MIR3 SINE MIR -26 182 50 375 297 109 30 chr4 6004132 6004297 -178284365 - MER91A DNA MER1_type -18 178 1 1738 80 0 24 chr4 6004561 6004810 -178283852 + L1PA8 LINE L1 5930 6172 0 438 20 0 0 chr4 6005333 6005384 -178283278 + (TG)n Simple_repeat Simple_repeat 1 51 0 1042 141 28 89 chr4 6005496 6005709 -178282953 - MER20 DNA MER1_type 0 219 20 280 350 39 56 chr4 6008166 6008346 -178280316 - L2 LINE L2 -2 3270 3094 25 31 0 0 chr4 6008781 6008813 -178279849 + AT_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr4 6010321 6010349 -178278313 + AT_rich Low_complexity Low_complexity 1 28 0 2428 82 7 0 chr4 6011385 6011690 -178276972 - AluSg SINE Alu -3 307 1 22 0 0 0 chr4 6016259 6016281 -178272381 + AT_rich Low_complexity Low_complexity 1 22 0 464 188 354 11 chr4 6016593 6016774 -178271888 - MIR SINE MIR -10 252 10 515 295 181 54 chr4 6016854 6017451 -178271211 + L2 LINE L2 2077 2749 -565 355 391 31 65 chr4 6017469 6017791 -178270871 + L2 LINE L2 2962 3272 0 648 321 66 45 chr4 6017913 6018430 -178270232 + MLT1K LTR MaLR 40 567 -21 225 0 0 0 chr4 6018566 6018591 -178270071 + (GAAAA)n Simple_repeat Simple_repeat 4 28 0 555 260 103 18 chr4 6018767 6018990 -178269672 + L3b LINE CR1 1161 1402 -181 328 296 51 0 chr4 6019113 6019211 -178269451 - L2 LINE L2 -1 3271 3169 771 179 8 22 chr4 6020301 6020435 -178268227 + FLAM_A SINE Alu 1 132 -1 423 187 0 0 chr4 6021387 6021494 -178267168 + (TA)n Simple_repeat Simple_repeat 1 107 0 458 227 9 9 chr4 6021769 6021879 -178266783 - LTR33 LTR ERVL -343 178 69 2200 137 38 11 chr4 6021879 6022252 -178266410 + MSTB LTR MaLR 44 426 0 462 259 83 19 chr4 6022288 6022493 -178266169 + LTR16A LTR ERVL 59 276 -174 2196 89 31 0 chr4 6022694 6022987 -178265675 + AluY SINE Alu 1 302 -9 235 244 110 37 chr4 6023374 6023456 -178265206 + MIR SINE MIR 175 262 0 412 226 124 0 chr4 6023760 6023897 -178264765 - L1ME4a LINE L1 0 6121 5968 31 0 0 0 chr4 6023988 6024019 -178264643 + AT_rich Low_complexity Low_complexity 1 31 0 1608 180 0 4 chr4 6024263 6024519 -178264143 - AluSx SINE Alu -57 255 1 334 272 123 31 chr4 6024569 6024731 -178263931 - L1 LINE L1 -1088 5058 4882 216 0 0 0 chr4 6024765 6024789 -178263873 + (CA)n Simple_repeat Simple_repeat 2 25 0 322 334 127 23 chr4 6024833 6025132 -178263530 - L1 LINE L1 -1517 4629 4300 324 338 44 19 chr4 6025546 6025706 -178262956 + L1MC4a LINE L1 5708 5871 -1937 181 73 24 24 chr4 6026056 6026097 -178262565 + (CAAAAA)n Simple_repeat Simple_repeat 3 43 0 494 270 0 0 chr4 6026221 6026336 -178262326 - MIR3 SINE MIR -28 180 66 189 329 14 0 chr4 6027069 6027139 -178261523 + MIR SINE MIR 180 250 -12 917 216 72 0 chr4 6028338 6028546 -178260116 - MER58A DNA MER1_type -1 223 1 205 191 143 0 chr4 6028851 6028893 -178259769 + L2 LINE L2 3219 3266 -6 203 203 0 109 chr4 6029789 6029853 -178258809 - MIR3 SINE MIR 0 208 152 1140 250 192 5 chr4 6029884 6030342 -178258320 - L2 LINE L2 0 3313 2770 185 254 164 15 chr4 6031525 6031592 -178257070 - L3 LINE CR1 -132 1445 1369 581 311 77 56 chr4 6031599 6031677 -178256985 - L3 LINE CR1 -322 1255 1180 2360 73 0 13 chr4 6031677 6031977 -178256685 - AluSc SINE Alu -13 296 1 581 311 77 56 chr4 6031977 6032274 -178256388 - L3 LINE CR1 -397 1180 872 260 309 147 29 chr4 6032471 6032675 -178255987 - L3 LINE CR1 -1089 488 261 490 326 70 11 chr4 6032920 6033107 -178255555 + MIR SINE MIR 47 244 -18 600 264 106 22 chr4 6034287 6034514 -178254148 - MIR SINE MIR 0 262 17 418 259 280 16 chr4 6035177 6035370 -178253292 - MIR SINE MIR -1 261 18 197 250 21 0 chr4 6035669 6035717 -178252945 + L2 LINE L2 3186 3234 -38 972 104 0 15 chr4 6037206 6037364 -178251298 - FLAM_C SINE Alu 0 156 1 313 300 70 0 chr4 6042064 6042164 -178246498 + MIR3 SINE MIR 78 184 -24 261 284 74 0 chr4 6042318 6042399 -178246263 - MIR SINE MIR -71 191 105 293 191 0 0 chr4 6042796 6042843 -178245819 - MER5B DNA MER1_type -131 47 1 789 227 104 5 chr4 6042861 6043081 -178245581 + MIR SINE MIR 13 254 -8 1232 179 25 68 chr4 6043193 6043472 -178245190 - AluJo SINE Alu -2 310 44 188 259 138 0 chr4 6043939 6043997 -178244665 - MIR3 SINE MIR -52 156 91 703 264 24 81 chr4 6045305 6045551 -178243111 - MIR SINE MIR -29 233 2 345 298 12 0 chr4 6046257 6046341 -178242321 + L2 LINE L2 3229 3313 0 211 353 35 0 chr4 6046653 6046738 -178241924 + L3b LINE CR1 1422 1509 -74 1646 175 42 18 chr4 6048083 6048414 -178240248 - MER2 DNA MER2_type -3 341 3 550 240 56 56 chr4 6048430 6048568 -178240094 - L1ME4a LINE L1 -198 5923 5783 2154 116 0 7 chr4 6048568 6048878 -178239784 + AluSq SINE Alu 1 308 -5 550 240 56 56 chr4 6048878 6048972 -178239690 - L1ME4a LINE L1 -337 5784 5691 420 221 0 12 chr4 6049327 6049413 -178239249 + MIR3 SINE MIR 117 201 -7 180 258 0 65 chr4 6050425 6050487 -178238175 - L2 LINE L2 -60 3212 3155 361 300 61 40 chr4 6050487 6050764 -178237898 + Charlie2 DNA MER1_type 1 283 -2499 2713 224 76 35 chr4 6050792 6051388 -178237274 + Charlie2 DNA MER1_type 1852 2505 -357 563 95 21 0 chr4 6051388 6051483 -178237179 + L1PB2 LINE L1 6053 6149 -2 2713 224 76 35 chr4 6051483 6051857 -178236805 + Charlie2 DNA MER1_type 2505 2862 0 189 333 49 31 chr4 6051951 6052134 -178236528 - L2 LINE L2 -313 2959 2701 381 259 45 18 chr4 6052194 6052306 -178236356 - L2 LINE L2 0 3272 3158 1262 187 68 3 chr4 6052352 6052702 -178235960 + L1MD2 LINE L1 5211 5577 -751 1258 126 40 20 chr4 6052723 6052970 -178235692 - L1MB8 LINE L1 -5 6173 5922 2026 140 35 85 chr4 6052975 6053314 -178235348 - MER47B DNA MER2_type -1910 413 99 1950 124 16 29 chr4 6053314 6053621 -178235041 + AluSx SINE Alu 5 307 -5 2026 140 35 85 chr4 6053621 6053716 -178234946 - MER47B DNA MER2_type -2224 99 1 1249 137 39 13 chr4 6053716 6053950 -178234712 - L1MB8 LINE L1 -261 5923 5684 * 1432 234 63 0 chr4 6053948 6054415 -178234247 + L1MD2 LINE L1 5579 6080 -86 1357 105 79 31 chr4 6054444 6054761 -178233901 - Tigger7 DNA MER2_type -34 2553 1 437 198 143 0 chr4 6054977 6055068 -178233594 + Tigger5 DNA MER2_type 132 235 -2088 405 265 108 24 chr4 6055940 6056106 -178232556 - MIR3 SINE MIR -6 202 23 386 300 27 0 chr4 6056629 6056739 -178231923 + MLT1K LTR MaLR 473 585 -3 291 323 168 0 chr4 6056740 6056901 -178231761 - MIR SINE MIR -49 213 26 406 257 13 99 chr4 6056988 6057140 -178231522 + MIR3 SINE MIR 6 144 -64 363 279 112 39 chr4 6057228 6057407 -178231255 + MER117 DNA MER1_type 6 197 0 360 241 117 19 chr4 6057725 6057859 -178230803 - MIR SINE MIR -65 143 30 385 299 28 0 chr4 6058708 6058815 -178229847 - L3 LINE CR1 -41 1536 1427 323 276 103 35 chr4 6059227 6059343 -178229319 - MIR SINE MIR -68 140 17 327 351 87 34 chr4 6059443 6059708 -178228954 + L2 LINE L2 2872 3150 -122 653 195 113 1 chr4 6059914 6060073 -178228589 + MER69A DNA AcHobo 1 177 0 242 338 42 0 chr4 6060080 6060151 -178228511 - L2 LINE L2 -65 3207 3134 296 174 279 0 chr4 6060157 6060243 -178228419 - L2 LINE L2 0 3272 3163 208 338 0 0 chr4 6060519 6060590 -178228072 - L3 LINE CR1 -111 1466 1396 301 354 76 0 chr4 6061563 6061707 -178226955 + MIR SINE MIR 108 262 0 946 133 23 12 chr4 6061959 6062132 -178226530 - FAM SINE Alu 0 175 1 628 174 174 31 chr4 6062250 6062411 -178226251 + Charlie1b DNA MER1_type 78 261 -262 544 184 72 0 chr4 6062409 6062534 -178226128 + Charlie1b DNA MER1_type 390 523 0 * 2082 41 96 4 chr4 6062608 6062878 -178225784 - AluY SINE Alu -16 295 1 538 165 44 0 chr4 6063629 6063720 -178224942 - FAM SINE Alu -90 95 1 2489 146 2 15 chr4 6063828 6064226 -178224436 + Tigger2a DNA MER2_type 1 393 -41 893 206 158 13 chr4 6064333 6064480 -178224182 + MLT1I LTR MaLR 146 270 -139 3692 58 13 2 chr4 6064480 6064928 -178223734 - MLT2A2 LTR ERVL 0 453 1 893 206 158 13 chr4 6064928 6065008 -178223654 + MLT1I LTR MaLR 270 406 -3 183 129 0 0 chr4 6065398 6065429 -178223233 + (T)n Simple_repeat Simple_repeat 1 31 0 2205 105 0 31 chr4 6065431 6065754 -178222908 - AluSq SINE Alu 0 313 1 2315 120 35 32 chr4 6065904 6066278 -178222384 + THE1C LTR MaLR 1 375 0 1406 239 163 14 chr4 6066400 6066836 -178221826 + MLT1D LTR MaLR 1 501 -4 1850 128 17 13 chr4 6067374 6067672 -178220990 + AluSx SINE Alu 2 300 -12 351 0 0 0 chr4 6068033 6068072 -178220590 + (TG)n Simple_repeat Simple_repeat 1 39 0 463 180 128 10 chr4 6068813 6068934 -178219728 + MIR SINE MIR 28 149 -65 2882 71 3 0 chr4 6069336 6069690 -178218972 + THE1A LTR MaLR 1 355 0 11679 94 17 2 chr4 6069690 6071247 -178217415 + THE1A-int LTR MaLR 1 1580 0 2732 72 20 0 chr4 6071247 6071595 -178217067 + THE1A LTR MaLR 1 355 0 1975 205 35 41 chr4 6071771 6072279 -178216383 - MLT1D LTR MaLR 0 505 1 515 260 127 20 chr4 6073171 6073321 -178215341 - MIR3 SINE MIR -5 203 38 287 246 134 42 chr4 6073500 6073642 -178215020 - L2 LINE L2 -2 3270 3116 330 277 178 50 chr4 6073845 6073988 -178214674 + MIR SINE MIR 7 185 -77 2208 123 33 41 chr4 6073988 6074355 -178214307 - THE1B LTR MaLR 0 364 1 330 277 178 50 chr4 6074355 6074413 -178214249 + MIR SINE MIR 185 234 -28 831 251 58 14 chr4 6074693 6074916 -178213746 + L3b LINE CR1 1192 1424 -159 571 291 79 25 chr4 6076573 6076776 -178211886 - MIR SINE MIR 0 262 49 2105 96 0 20 chr4 6076777 6077078 -178211584 + AluSg SINE Alu 1 295 -15 2026 114 7 0 chr4 6077091 6077400 -178211262 + AluSx SINE Alu 2 312 0 809 161 0 15 chr4 6078359 6078496 -178210166 - FRAM SINE Alu -22 154 20 220 249 129 41 chr4 6078741 6078934 -178209728 + MIR SINE MIR 8 224 -38 234 363 108 0 chr4 6078958 6079060 -178209602 - L2 LINE L2 -1 3312 3200 219 69 0 0 chr4 6079558 6079587 -178209075 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 218 268 138 65 chr4 6079587 6079710 -178208952 - L2 LINE L2 -13 3300 3169 201 39 0 0 chr4 6079741 6079767 -178208895 + (CAAAAA)n Simple_repeat Simple_repeat 2 27 0 251 193 53 0 chr4 6079859 6079916 -178208746 + CT-rich Low_complexity Low_complexity 2 61 0 2531 157 29 5 chr4 6080026 6080441 -178208221 - MER61B LTR ERV1 0 425 1 184 403 17 0 chr4 6080489 6080608 -178208054 - L3 LINE CR1 -72 1505 1385 * 208 351 44 18 chr4 6080602 6080619 -178208043 - L2 LINE L2 -1 3271 3256 1581 146 3 57 chr4 6080619 6080934 -178207728 - AluJo SINE Alu -14 298 1 208 351 44 18 chr4 6080934 6081030 -178207632 - L2 LINE L2 -16 3256 3155 666 304 111 33 chr4 6081114 6081476 -178207186 - L3 LINE CR1 -455 1122 733 204 40 0 0 chr4 6081511 6081536 -178207126 + (TG)n Simple_repeat Simple_repeat 2 26 0 1595 191 11 46 chr4 6081998 6082364 -178206298 - L1PA16 LINE L1 0 6166 5814 2100 63 44 0 chr4 6082603 6082873 -178205789 + AluY SINE Alu 1 282 -29 270 0 0 0 chr4 6082877 6082907 -178205755 + (TAA)n Simple_repeat Simple_repeat 2 31 0 301 282 68 8 chr4 6083227 6083344 -178205318 + MIR SINE MIR 139 262 0 347 288 64 52 chr4 6083401 6083758 -178204904 - MLT1J LTR MaLR -56 455 110 333 258 161 97 chr4 6084037 6084386 -178204276 - MLT1I LTR MaLR -21 388 18 213 227 18 172 chr4 6084404 6084567 -178204095 + L2 LINE L2 3054 3191 -81 2138 147 21 0 chr4 6085031 6085364 -178203298 + L1MC1 LINE L1 5514 5853 -480 391 198 207 18 chr4 6085382 6085493 -178203169 + MIR SINE MIR 73 204 -58 633 281 40 12 chr4 6085495 6085858 -178202804 + LTR33 LTR ERVL 1 406 -115 234 0 0 0 chr4 6085920 6085946 -178202716 + (A)n Simple_repeat Simple_repeat 1 26 0 2962 128 27 2 chr4 6085947 6086431 -178202231 + L1MC2 LINE L1 5839 6334 -10 344 331 31 8 chr4 6086503 6086633 -178202029 - L2 LINE L2 -220 3052 2920 * 353 292 62 0 chr4 6086626 6086722 -178201940 + L2 LINE L2 3212 3313 0 2144 105 3 0 chr4 6086801 6087097 -178201565 - AluSp SINE Alu -16 297 1 562 275 40 29 chr4 6087730 6087967 -178200695 - MIR SINE MIR -15 247 2 256 297 18 54 chr4 6088219 6088330 -178200332 + MER67B LTR ERV1 55 161 -500 225 0 0 0 chr4 6088608 6088633 -178200029 + (TG)n Simple_repeat Simple_repeat 2 26 0 415 236 0 0 chr4 6088654 6088755 -178199907 + MIR SINE MIR 52 153 -55 778 294 124 13 chr4 6088846 6088956 -178199706 - L2 LINE L2 -39 3274 3178 2345 107 48 25 chr4 6088956 6089312 -178199350 - THE1B LTR MaLR 0 364 1 778 294 124 13 chr4 6089312 6089672 -178198990 - L2 LINE L2 -135 3178 2738 357 118 0 0 chr4 6089865 6089916 -178198746 + MSTA LTR MaLR 2 52 -376 2149 253 90 13 chr4 6090010 6091210 -178197452 - L1MC4 LINE L1 -139 7903 6459 1767 128 134 15 chr4 6091493 6091828 -178196834 + THE1C LTR MaLR 1 375 0 228 200 18 0 chr4 6092149 6092204 -178196458 + L2 LINE L2 2918 2973 -299 530 248 32 16 chr4 6092392 6092517 -178196145 - L2 LINE L2 -1 3271 3145 204 273 0 0 chr4 6092670 6092714 -178195948 - L2 LINE L2 -93 3179 3136 446 301 133 18 chr4 6092833 6093172 -178195490 + LTR16A1 LTR ERVL 33 410 -47 2847 78 16 3 chr4 6093300 6093670 -178194992 + THE1C LTR MaLR 1 375 0 347 0 23 0 chr4 6093921 6093964 -178194698 + (CA)n Simple_repeat Simple_repeat 2 45 0 270 0 0 0 chr4 6094026 6094056 -178194606 + (CA)n Simple_repeat Simple_repeat 2 31 0 211 240 73 62 chr4 6094812 6094908 -178193754 - MIR SINE MIR -33 229 133 508 162 20 10 chr4 6095516 6095615 -178193047 - MER96B DNA MER1_type? -286 131 32 289 231 37 65 chr4 6095665 6095773 -178192889 - MIR SINE MIR -78 184 80 1446 187 38 29 chr4 6096571 6096887 -178191775 - MLT1A2 LTR MaLR 0 374 56 4483 188 12 21 chr4 6097007 6097894 -178190768 - L1MB5 LINE L1 -36 6138 5260 1657 179 0 28 chr4 6097960 6098279 -178190383 + AluJb SINE Alu 1 310 -2 329 115 33 0 chr4 6098279 6098333 -178190329 + GA-rich Low_complexity Low_complexity 6 64 0 698 266 0 12 chr4 6098382 6098551 -178190111 + MIR SINE MIR 96 262 0 376 195 114 57 chr4 6098634 6098833 -178189829 - MIR SINE MIR -3 259 44 545 289 27 11 chr4 6098840 6099027 -178189635 + LTR16A LTR ERVL 157 346 -104 350 265 12 0 chr4 6099076 6099159 -178189503 + MER81 DNA DNA 30 113 -1 25 51 0 0 chr4 6099988 6100027 -178188635 + AT_rich Low_complexity Low_complexity 1 39 0 1601 208 140 20 chr4 6100048 6100447 -178188215 - MLT2B1 LTR ERVL -71 449 3 1259 202 175 19 chr4 6100663 6101034 -178187628 + MLT1C LTR MaLR 6 434 -33 1954 109 26 32 chr4 6101034 6101345 -178187317 - THE1B LTR MaLR 0 364 56 4781 128 55 3 chr4 6101929 6102669 -178185993 + MER4E LTR ERV1 1 779 0 1650 163 7 0 chr4 6102919 6103189 -178185473 - AluJo SINE Alu -8 304 33 1460 253 48 27 chr4 6103859 6104146 -178184516 - MLT1C LTR MaLR 0 467 166 2034 118 0 6 chr4 6104146 6104459 -178184203 - AluSx SINE Alu -1 311 1 1460 253 48 27 chr4 6104459 6104613 -178184049 - MLT1C LTR MaLR -301 166 17 214 269 30 0 chr4 6104661 6104728 -178183934 + MIR SINE MIR 187 255 -7 326 232 0 14 chr4 6105202 6105271 -178183391 - L2 LINE L2 -4 3309 3242 617 282 70 37 chr4 6105315 6105556 -178183106 - MIR SINE MIR -10 252 4 215 261 94 58 chr4 6105614 6105752 -178182910 - L2 LINE L2 -174 3098 2956 1196 118 0 0 chr4 6106120 6106298 -178182364 + L1PA14 LINE L1 5984 6161 0 513 0 0 0 chr4 6106429 6106486 -178182176 + (TAA)n Simple_repeat Simple_repeat 3 59 0 1749 137 96 0 chr4 6106493 6106763 -178181899 + AluJo SINE Alu 3 298 -14 690 297 67 5 chr4 6106773 6106968 -178181694 - MIR SINE MIR -6 256 50 1448 215 93 9 chr4 6107068 6107412 -178181250 + MLT1A2 LTR MaLR 2 374 0 673 276 98 19 chr4 6107642 6107856 -178180806 + MIR SINE MIR 29 259 -3 183 80 0 0 chr4 6108629 6108654 -178180008 + (T)n Simple_repeat Simple_repeat 1 25 0 219 293 190 17 chr4 6109049 6109223 -178179439 + L2 LINE L2 3019 3222 -50 405 268 150 0 chr4 6109563 6109690 -178178972 + MIR SINE MIR 117 262 0 216 290 32 0 chr4 6110160 6110222 -178178440 - MIR SINE MIR -64 144 81 2295 110 13 0 chr4 6110293 6110594 -178178068 + AluSx SINE Alu 1 305 -7 647 277 66 31 chr4 6110718 6111036 -178177626 + L1MC4a LINE L1 5558 5886 -1922 210 369 29 0 chr4 6111275 6111378 -178177284 + MIR SINE MIR 66 171 -91 327 260 0 0 chr4 6111599 6111676 -178176986 - L2 LINE L2 -215 3057 2981 577 254 29 35 chr4 6111919 6111950 -178176712 - MIR SINE MIR -60 202 172 2297 105 0 7 chr4 6111950 6112276 -178176386 - AluSx SINE Alu 0 312 1 577 254 29 35 chr4 6112276 6112417 -178176245 - MIR SINE MIR -90 172 31 327 294 73 0 chr4 6112613 6112722 -178175940 - MIR SINE MIR -89 173 57 233 279 135 29 chr4 6112752 6112856 -178175806 - MIR SINE MIR -81 181 67 348 269 83 28 chr4 6113205 6113350 -178175312 - MIR SINE MIR -52 210 58 2351 98 3 0 chr4 6113650 6113955 -178174707 + AluY SINE Alu 1 306 -5 2456 76 3 13 chr4 6114028 6114343 -178174319 + AluSq SINE Alu 1 312 -1 1183 141 0 17 chr4 6114343 6114510 -178174152 + AluSg/x SINE Alu 133 298 -12 303 312 29 0 chr4 6115587 6115710 -178172952 - MIR SINE MIR -69 139 12 381 299 86 41 chr4 6115731 6115928 -178172734 + MIR SINE MIR 13 218 -44 1137 258 79 25 chr4 6115932 6116309 -178172353 - MLT1L LTR MaLR -4 611 205 2086 232 102 16 chr4 6116309 6116856 -178171806 - MLT1G1 LTR MaLR 0 595 2 1137 258 79 25 chr4 6116856 6116923 -178171739 - MLT1L LTR MaLR -410 205 143 2365 115 0 0 chr4 6117139 6117451 -178171211 - AluSx SINE Alu 0 312 1 297 167 0 0 chr4 6117817 6117871 -178170791 + (TG)n Simple_repeat Simple_repeat 1 54 0 389 312 12 58 chr4 6118115 6118288 -178170374 - MIR3 SINE MIR -4 204 40 * 593 261 43 68 chr4 6118287 6118521 -178170141 + MIR SINE MIR 6 233 -29 1974 138 0 10 chr4 6118529 6118833 -178169829 - MLT1A1 LTR MaLR 0 365 65 2064 101 0 8 chr4 6118836 6119103 -178169559 - AluSq SINE Alu -48 265 1 274 265 116 79 chr4 6119401 6119590 -178169072 - MLT1J LTR MaLR -6 505 310 850 249 121 55 chr4 6119706 6120225 -178168437 + MLT1G1 LTR MaLR 34 554 -1 227 227 0 30 chr4 6120227 6120293 -178168369 - MLT1J2 LTR MaLR -320 130 67 314 200 91 0 chr4 6120484 6120594 -178168068 - Charlie7 DNA MER1_type -40 2572 2453 822 231 7 0 chr4 6120595 6120742 -178167920 + FAM SINE Alu 2 149 -36 2197 138 52 6 chr4 6120744 6121092 -178167570 + THE1B LTR MaLR 1 364 0 180 191 0 0 chr4 6121121 6121137 -178167525 + (TAA)n Simple_repeat Simple_repeat 1 16 -26 1843 159 7 3 chr4 6121137 6121432 -178167230 + AluJb SINE Alu 1 296 -16 180 191 0 0 chr4 6121432 6121457 -178167205 + (TAA)n Simple_repeat Simple_repeat 15 42 0 192 77 0 0 chr4 6121712 6121738 -178166924 + (TC)n Simple_repeat Simple_repeat 2 27 0 620 266 107 64 chr4 6121755 6122073 -178166589 - Charlie7 DNA MER1_type -2058 554 202 2027 118 81 35 chr4 6122073 6122421 -178166241 - THE1B LTR MaLR 0 364 1 620 266 107 64 chr4 6122421 6122633 -178166029 - Charlie7 DNA MER1_type -2410 202 1 295 330 76 0 chr4 6122634 6122752 -178165910 + L2 LINE L2 3146 3272 0 1805 154 129 7 chr4 6123128 6123528 -178165134 - MLT1D LTR MaLR 0 467 26 1602 150 40 44 chr4 6123640 6123780 -178164882 - AluJo SINE Alu -39 273 133 2365 104 0 0 chr4 6123780 6124078 -178164584 - AluSx SINE Alu -14 298 1 1602 150 40 44 chr4 6124078 6124211 -178164451 - AluJo SINE Alu -179 133 1 299 250 0 0 chr4 6124222 6124294 -178164368 - MER81 DNA DNA -42 72 1 561 286 85 5 chr4 6124299 6124488 -178164174 + MIR SINE MIR 2 205 -57 263 241 51 25 chr4 6125490 6125569 -178163093 - L2 LINE L2 -46 3226 3146 314 224 90 75 chr4 6125785 6125919 -178162743 + L2 LINE L2 2951 3086 -186 4081 197 21 52 chr4 6125967 6126483 -178162179 - L1MB7 LINE L1 0 6184 5653 2719 139 27 2 chr4 6126483 6126894 -178161768 + MSTB LTR MaLR 5 425 -1 4081 197 21 52 chr4 6126894 6127251 -178161411 - L1MB7 LINE L1 -531 5653 5286 2210 108 3 0 chr4 6127251 6127546 -178161116 - AluSp SINE Alu -17 296 1 4081 197 21 52 chr4 6127546 6127979 -178160683 - L1MB7 LINE L1 -898 5286 4841 4364 65 0 7 chr4 6127979 6128533 -178160129 + L1PA13 LINE L1 5612 6161 -2 4081 197 21 52 chr4 6128533 6128716 -178159946 - L1MB7 LINE L1 -1343 4841 4654 1221 158 83 0 chr4 6128716 6128957 -178159705 - L1MB3 LINE L1 0 6183 5923 4081 197 21 52 chr4 6128957 6129344 -178159318 - L1MB7 LINE L1 -1530 4654 4364 649 203 209 89 chr4 6129410 6129725 -178158937 + MLT1J1 LTR MaLR 74 427 -23 1943 174 34 29 chr4 6130100 6130647 -178158015 + MLT2A2 LTR ERVL 4 554 0 289 243 27 14 chr4 6130647 6130721 -178157941 - MIR SINE MIR -55 153 88 243 304 89 60 chr4 6130815 6130983 -178157679 + L2 LINE L2 2916 3088 -184 440 315 14 21 chr4 6131077 6131220 -178157442 + MIR SINE MIR 118 259 -3 182 258 54 65 chr4 6131241 6131334 -178157328 + L2 LINE L2 3222 3313 0 1982 153 3 7 chr4 6131348 6131648 -178157014 + AluJb SINE Alu 3 301 -11 2445 75 0 3 chr4 6131942 6132248 -178156414 + AluY SINE Alu 1 305 -6 2186 123 0 37 chr4 6132644 6132680 -178155982 - AluSq SINE Alu 0 313 277 180 0 0 0 chr4 6132680 6132700 -178155962 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2186 123 0 37 chr4 6132700 6132988 -178155674 - AluSq SINE Alu -36 277 1 2411 36 11 0 chr4 6133376 6133652 -178155010 - AluY SINE Alu -2 309 31 1170 291 71 14 chr4 6133751 6134187 -178154475 - L2 LINE L2 0 3313 2853 272 325 73 14 chr4 6134313 6134455 -178154207 + MIR SINE MIR 1 147 -62 2468 99 0 0 chr4 6134485 6134797 -178153865 + AluSx SINE Alu 1 312 0 271 271 26 56 chr4 6135029 6135180 -178153482 - MIR SINE MIR -67 141 8 219 203 0 68 chr4 6135258 6135317 -178153345 + L2 LINE L2 3136 3190 -82 713 242 152 51 chr4 6135448 6135857 -178152805 - MLT1J2 LTR MaLR 0 450 1 1436 111 20 0 chr4 6136296 6136495 -178152167 + AluSq SINE Alu 1 203 -110 4142 139 45 33 chr4 6136536 6136839 -178151823 + L1MB3 LINE L1 5317 5615 -568 2132 146 36 33 chr4 6136839 6137202 -178151460 - THE1B LTR MaLR 0 364 1 4142 139 45 33 chr4 6137202 6137713 -178150949 + L1MB3 LINE L1 5615 6141 -42 836 124 25 8 chr4 6137724 6137845 -178150817 + AluJb SINE Alu 12 134 -178 2504 72 0 0 chr4 6137846 6138151 -178150511 + AluY SINE Alu 1 305 -6 21 0 0 0 chr4 6138356 6138377 -178150285 + AT_rich Low_complexity Low_complexity 1 21 0 2232 109 3 0 chr4 6138476 6138770 -178149892 + AluSp SINE Alu 1 295 -18 1336 167 31 108 chr4 6138891 6139025 -178149637 + MLT1A1 LTR MaLR 2 145 -220 2332 140 89 0 chr4 6139025 6139418 -178149244 - MSTA LTR MaLR 0 428 1 1336 167 31 108 chr4 6139418 6139673 -178148989 + MLT1A1 LTR MaLR 145 361 -4 223 294 168 25 chr4 6139843 6139962 -178148700 + MIR SINE MIR 29 164 -98 208 216 0 0 chr4 6139959 6139996 -178148666 + MIR SINE MIR 110 146 -62 * 378 200 56 11 chr4 6140003 6140093 -178148569 + MIR SINE MIR 99 192 -70 194 269 54 11 chr4 6140635 6140728 -178147934 - MIR3 SINE MIR -19 189 93 912 195 71 95 chr4 6140880 6141218 -178147444 + MLT1J LTR MaLR 45 374 -137 310 310 163 8 chr4 6141243 6141372 -178147290 - MIR SINE MIR -95 167 19 540 263 176 66 chr4 6141666 6141768 -178146894 + MLT1G1 LTR MaLR 3 92 -503 2193 125 3 0 chr4 6141768 6142065 -178146597 + AluSq SINE Alu 1 298 -15 540 263 176 66 chr4 6142065 6142495 -178146167 + MLT1G1 LTR MaLR 92 594 -1 612 139 9 26 chr4 6143329 6143444 -178145218 - L1MB7 LINE L1 -43 6141 6029 2148 135 3 13 chr4 6143454 6143629 -178145033 - AluSx SINE Alu -4 308 136 2055 133 7 7 chr4 6143629 6143929 -178144733 - AluSg1 SINE Alu -9 300 1 2148 135 3 13 chr4 6143929 6144064 -178144598 - AluSx SINE Alu -176 136 1 562 289 29 69 chr4 6144100 6144153 -178144509 - L1MC4a LINE L1 -1925 5883 5829 1898 171 0 13 chr4 6144153 6144462 -178144200 - AluJb SINE Alu -2 310 6 562 289 29 69 chr4 6144462 6144754 -178143908 - L1MC4a LINE L1 -1979 5829 5552 1096 216 103 23 chr4 6144973 6145350 -178143312 + MLT1J LTR MaLR 20 482 -29 288 250 99 24 chr4 6145445 6145680 -178142982 - L2 LINE L2 -22 3250 2935 701 96 36 2 chr4 6146158 6146409 -178142253 + AluSp SINE Alu 2 305 -8 361 322 70 74 chr4 6146687 6147146 -178141516 - L2 LINE L2 0 3272 2816 1477 231 58 14 chr4 6147352 6147780 -178140882 + MER39 LTR ERV1 261 707 0 1519 208 62 18 chr4 6147843 6148280 -178140382 - MLT1C LTR MaLR -4 463 8 290 179 218 0 chr4 6150612 6150690 -178137972 - MER5A DNA MER1_type -80 109 15 816 220 39 28 chr4 6150695 6150877 -178137785 - MER5A DNA MER1_type -5 184 1 322 312 24 16 chr4 6151028 6151153 -178137509 + L2 LINE L2 2944 3069 -203 498 216 89 10 chr4 6151314 6151452 -178137210 + MIR SINE MIR 54 206 -56 190 300 100 10 chr4 6151637 6151737 -178136925 - MIR SINE MIR -4 258 150 772 282 53 11 chr4 6152284 6152550 -178136112 + L2 LINE L2 3037 3313 0 4206 117 16 30 chr4 6152567 6152663 -178135999 + MER41B LTR ERV1 2 98 -537 2529 73 0 0 chr4 6152663 6152965 -178135697 - AluY SINE Alu -7 304 3 4206 117 16 30 chr4 6152965 6153511 -178135151 + MER41B LTR ERV1 98 635 0 350 297 21 41 chr4 6153679 6153824 -178134838 + MIR3 SINE MIR 3 144 -64 846 141 0 0 chr4 6153833 6153954 -178134708 + AluJb SINE Alu 3 123 -189 226 318 0 15 chr4 6155176 6155242 -178133420 - L2 LINE L2 -1 3271 3207 608 206 34 41 chr4 6155417 6155563 -178133099 + L2 LINE L2 3166 3310 -3 2226 64 0 7 chr4 6156595 6156891 -178131771 - AluSp SINE Alu -19 294 1 349 287 94 25 chr4 6156891 6157093 -178131569 - L1ME4a LINE L1 -294 5827 5612 481 51 51 25 chr4 6157101 6157121 -178131541 - Alu SINE Alu 0 310 292 2060 169 37 5 chr4 6157121 6157524 -178131138 - L1MB3 LINE L1 0 6183 5768 481 51 51 25 chr4 6157524 6157582 -178131080 - Alu SINE Alu -18 292 230 614 228 40 8 chr4 6157583 6157787 -178130875 - L1MB3 LINE L1 -381 5787 5503 356 261 8 0 chr4 6157918 6158037 -178130625 + (CCCA)n Simple_repeat Simple_repeat 3 122 0 955 137 11 0 chr4 6158090 6158265 -178130397 + (TCCA)n Simple_repeat Simple_repeat 3 179 0 198 0 0 0 chr4 6160320 6160342 -178128320 + (A)n Simple_repeat Simple_repeat 1 22 0 1429 188 41 0 chr4 6161805 6162076 -178126586 + AluJo SINE Alu 1 282 -30 333 0 0 0 chr4 6162079 6162116 -178126546 + (CA)n Simple_repeat Simple_repeat 2 38 0 331 246 123 43 chr4 6162285 6162423 -178126239 - L2 LINE L2 -4 3309 3161 1316 94 0 85 chr4 6162476 6162700 -178125962 - AluSg/x SINE Alu -3 309 105 566 217 7 43 chr4 6162716 6162854 -178125808 - AluSq/x SINE Alu -179 133 1 21 36 0 0 chr4 6163013 6163041 -178125621 + AT_rich Low_complexity Low_complexity 1 28 0 940 88 7 36 chr4 6163072 6163209 -178125453 - AluSq/x SINE Alu -179 133 1 1159 254 43 40 chr4 6163215 6163585 -178125077 + MLT1I LTR MaLR 39 409 0 185 340 64 21 chr4 6163810 6163904 -178124758 + MIR SINE MIR 163 260 -2 660 270 56 9 chr4 6163908 6164104 -178124558 - MIR SINE MIR -30 232 34 294 219 20 137 chr4 6164247 6164393 -178124269 - MLT1H LTR MaLR 0 549 421 232 278 14 14 chr4 6164574 6164646 -178124016 - MIR SINE MIR -157 105 34 208 247 47 0 chr4 6164730 6164815 -178123847 + (TA)n Simple_repeat Simple_repeat 2 90 0 746 188 0 8 chr4 6165137 6165310 -178123352 - FLAM_C SINE Alu 0 172 1 281 293 53 0 chr4 6165380 6165455 -178123207 + MIR SINE MIR 119 197 -65 267 256 131 22 chr4 6165463 6165478 -178123184 + MIR3 SINE MIR 23 35 -173 2256 171 5 3 chr4 6165478 6165865 -178122797 - MLT1B LTR MaLR -2 388 1 267 256 131 22 chr4 6165865 6165986 -178122676 + MIR3 SINE MIR 35 174 -34 773 162 0 22 chr4 6166410 6166546 -178122116 - FLAM_A SINE Alu 0 133 1 248 306 58 40 chr4 6166775 6166948 -178121714 - L1MC/D LINE L1 -1910 5898 5723 204 179 74 28 chr4 6166949 6167038 -178121624 + MIR SINE MIR 93 253 -9 440 204 78 0 chr4 6167343 6167446 -178121216 - L2 LINE L2 0 3272 3162 2258 98 0 3 chr4 6167491 6167796 -178120866 + AluSx SINE Alu 1 304 -8 2069 131 0 0 chr4 6168209 6168500 -178120162 - AluSx SINE Alu -21 291 1 310 283 131 0 chr4 6168958 6169057 -178119605 + L2 LINE L2 3161 3272 0 804 207 62 43 chr4 6169552 6169760 -178118902 - MIR SINE MIR 0 262 51 1496 179 7 18 chr4 6169760 6170040 -178118622 - MLT1B LTR MaLR 0 390 114 255 311 29 19 chr4 6170060 6170163 -178118499 + MIR SINE MIR 117 220 -42 257 274 105 88 chr4 6170349 6170645 -178118017 + L2 LINE L2 2972 3272 0 339 303 103 12 chr4 6170744 6170909 -178117753 - L1ME4a LINE L1 -3 6118 5939 354 285 43 65 chr4 6170936 6171122 -178117540 - L1ME4a LINE L1 -157 5964 5783 278 371 101 3 chr4 6171759 6172047 -178116615 + L2 LINE L2 2915 3230 -42 1750 162 3 19 chr4 6172280 6172594 -178116068 + AluJo SINE Alu 1 309 -3 1852 233 90 32 chr4 6172821 6173378 -178115284 + MLT1E LTR MaLR 5 593 0 2177 101 0 3 chr4 6173547 6173844 -178114818 + AluSc SINE Alu 1 296 -13 253 257 14 14 chr4 6174125 6174199 -178114463 + LTR33A LTR ERVL 448 521 -2 285 253 66 22 chr4 6174201 6174292 -178114370 - L2 LINE L2 -41 3231 3137 467 193 34 39 chr4 6174341 6174468 -178114194 + MER69 DNA AcHobo 1 2467 -59 2195 96 6 13 chr4 6174490 6174802 -178113860 - AluSx SINE Alu -2 310 1 250 171 0 0 chr4 6174829 6174870 -178113792 + MER69 DNA AcHobo 2478 2518 -8 1759 188 115 65 chr4 6175331 6175825 -178112837 - MLT2B1 LTR ERVL 0 520 2 1729 114 16 75 chr4 6175825 6176131 -178112531 + AluSx SINE Alu 1 288 -24 2026 137 3 0 chr4 6176219 6176519 -178112143 + AluSp SINE Alu 1 301 -12 1098 275 45 27 chr4 6176654 6177028 -178111634 - LTR16C LTR ERVL 0 491 111 250 377 72 7 chr4 6177298 6177436 -178111226 + MIR SINE MIR 47 193 -69 415 261 22 22 chr4 6178162 6178254 -178110408 - MIR SINE MIR -86 122 31 307 325 87 8 chr4 6178538 6178664 -178109998 + MIR3 SINE MIR 60 195 -13 1104 149 0 2 chr4 6178664 6179006 -178109656 + (TCCA)n Simple_repeat Simple_repeat 1 521 0 226 320 60 33 chr4 6179221 6179371 -178109291 - MIR SINE MIR -25 237 84 625 216 227 0 chr4 6179409 6179585 -178109077 + MIR SINE MIR 45 260 -2 242 299 35 0 chr4 6180362 6180449 -178108213 + MIR SINE MIR 49 138 -124 1100 63 8 8 chr4 6180780 6181020 -178107642 + (TCTA)n Simple_repeat Simple_repeat 1 240 0 1207 197 42 11 chr4 6181037 6181301 -178107361 - AluJo SINE Alu -40 272 1 312 339 27 49 chr4 6182234 6182417 -178106245 - MIR3 SINE MIR -21 187 9 239 272 59 81 chr4 6182688 6182824 -178105838 + MIR SINE MIR 72 204 -58 515 264 83 7 chr4 6182942 6183086 -178105576 - L2 LINE L2 0 3313 3159 720 284 175 9 chr4 6183107 6183438 -178105224 - L2 LINE L2 -385 2929 2544 2330 136 25 0 chr4 6183794 6184154 -178104508 - L1PB1 LINE L1 0 6151 5783 1759 77 0 4 chr4 6184256 6184489 -178104173 - L1PB1 LINE L1 -375 5776 5545 2120 86 48 7 chr4 6184501 6184792 -178103870 - AluY SINE Alu -7 304 2 843 273 71 47 chr4 6184848 6185229 -178103433 - L1MEd LINE L1 -5719 400 11 513 270 43 37 chr4 6185281 6185444 -178103218 + MER5A DNA MER1_type 26 189 0 407 173 2 2 chr4 6185585 6185665 -178102997 - MER58 DNA MER1_type 0 2420 262 1925 137 3 0 chr4 6185739 6186024 -178102638 + AluSx SINE Alu 1 286 -26 534 129 0 0 chr4 6186024 6186109 -178102553 + (GGGA)n Simple_repeat Simple_repeat 2 86 0 2473 114 31 14 chr4 6186584 6186942 -178101720 + THE1B LTR MaLR 1 364 0 215 349 24 12 chr4 6187691 6187774 -178100888 - MIR SINE MIR -109 99 16 852 138 20 40 chr4 6187776 6187928 -178100734 + MLT1C LTR MaLR 15 163 -304 800 189 0 0 chr4 6187928 6188060 -178100602 - FRAM SINE Alu -8 168 37 1240 207 50 40 chr4 6188060 6188090 -178100572 + MLT1C LTR MaLR 157 185 -282 632 206 16 40 chr4 6188090 6188216 -178100446 + FLAM_A SINE Alu 1 123 -10 1240 207 50 40 chr4 6188216 6188484 -178100178 + MLT1C LTR MaLR 185 458 -9 964 244 129 58 chr4 6188603 6189038 -178099624 + MLT1J LTR MaLR 5 470 -41 360 173 0 0 chr4 6189170 6189245 -178099417 - L1MA10 LINE L1 -2 6332 6258 367 250 78 9 chr4 6189253 6189369 -178099293 - LTR40a LTR ERVL -353 166 43 783 288 105 27 chr4 6189527 6189937 -178098725 - LTR33 LTR ERVL -68 453 12 700 148 62 0 chr4 6190461 6190589 -178098073 + L1PA16 LINE L1 6028 6163 -3 256 340 10 20 chr4 6190942 6191042 -178097620 - MER5A DNA MER1_type -35 154 56 706 202 136 84 chr4 6191869 6192319 -178096343 - HAL1 LINE L1 -1187 1320 848 183 410 26 26 chr4 6192344 6192500 -178096162 + L2 LINE L2 2606 2761 -553 306 330 39 0 chr4 6192724 6192827 -178095835 - MIR SINE MIR -109 153 47 287 296 204 0 chr4 6193635 6193743 -178094919 + MIR3 SINE MIR 68 197 -11 846 274 36 4 chr4 6194256 6194508 -178094154 + MIR SINE MIR 3 262 0 231 248 78 23 chr4 6194954 6195083 -178093579 + L1M4 LINE L1 2915 3050 -3096 562 324 47 28 chr4 6195092 6195305 -178093357 + LTR16A LTR ERVL 1 217 -233 1272 221 50 16 chr4 6195604 6195926 -178092736 - MER74B LTR ERVL -79 543 211 237 204 0 0 chr4 6195963 6196012 -178092650 - MER74B LTR ERVL -573 49 1 539 201 22 22 chr4 6196039 6196173 -178092489 + LTR16A LTR ERVL 252 385 -65 2085 164 22 8 chr4 6196229 6196589 -178092073 - MLT1A1 LTR MaLR 0 365 1 345 285 30 6 chr4 6196602 6196767 -178091895 + L1M4 LINE L1 3094 3262 -2884 548 217 0 9 chr4 6196776 6196891 -178091771 + FLAM_C SINE Alu 24 137 -6 24 0 0 0 chr4 6197273 6197297 -178091365 + AT_rich Low_complexity Low_complexity 1 24 0 1707 171 24 0 chr4 6197316 6197603 -178091059 - AluSx SINE Alu -18 294 1 301 305 96 48 chr4 6197617 6197804 -178090858 - MIR SINE MIR -18 244 49 1109 220 33 11 chr4 6198045 6198318 -178090344 - MLT1C LTR MaLR -1 466 188 389 321 36 22 chr4 6198538 6198675 -178089987 + MIR SINE MIR 6 144 -118 259 222 48 16 chr4 6198898 6198961 -178089701 - MLT1K LTR MaLR -15 573 509 1485 206 71 52 chr4 6199072 6199447 -178089215 + Charlie4a DNA MER1_type 23 410 -1551 2060 113 0 3 chr4 6199447 6199738 -178088924 - AluSx SINE Alu -22 290 1 1485 206 71 52 chr4 6199738 6199839 -178088823 + Charlie4a DNA MER1_type 410 508 0 313 261 67 25 chr4 6200015 6200134 -178088528 + LTR16C LTR ERVL 261 384 -107 192 345 93 22 chr4 6200358 6200497 -178088165 - L2 LINE L2 -26 3287 3139 214 307 34 11 chr4 6200687 6200775 -178087887 + L2 LINE L2 2966 3055 -217 748 286 110 14 chr4 6201315 6201679 -178086983 + LTR16C LTR ERVL 93 491 0 244 303 40 0 chr4 6201969 6202045 -178086617 + MIR3 SINE MIR 89 167 -41 259 267 35 47 chr4 6202090 6202176 -178086486 + MIR SINE MIR 99 183 -79 743 238 99 46 chr4 6202349 6202483 -178086179 + MLT1C LTR MaLR 7 132 -258 2263 173 52 2 chr4 6202483 6202888 -178085774 - MSTB LTR MaLR 0 426 2 743 238 99 46 chr4 6202888 6203121 -178085541 + MLT1C LTR MaLR 132 375 -15 862 222 0 0 chr4 6203259 6203421 -178085241 - MER45A DNA AcHobo 0 178 17 199 231 0 19 chr4 6203637 6203689 -178084973 - MIR SINE MIR -138 70 20 408 271 33 8 chr4 6203765 6203887 -178084775 + MIR SINE MIR 102 226 -36 207 0 0 0 chr4 6204639 6204662 -178084000 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1739 232 18 8 chr4 6204665 6205057 -178083605 - L1MC2 LINE L1 -9 6335 5940 231 200 0 0 chr4 6205466 6205506 -178083156 + CT-rich Low_complexity Low_complexity 2 41 0 327 265 39 88 chr4 6205876 6206080 -178082582 + L2 LINE L2 2332 2525 -789 2123 177 9 0 chr4 6206354 6206687 -178081975 - MER1B DNA MER1_type 0 337 2 299 310 9 78 chr4 6207390 6207506 -178081156 - MIR SINE MIR -109 153 46 290 286 229 0 chr4 6207629 6207734 -178080928 - MIR3 SINE MIR -13 195 67 298 268 159 36 chr4 6208220 6208358 -178080304 + MIR SINE MIR 65 219 -43 1775 213 2 45 chr4 6208707 6208738 -178079924 - MLT2D LTR ERVL -10 404 373 282 56 0 0 chr4 6208738 6208774 -178079888 + (TG)n Simple_repeat Simple_repeat 1 36 0 1775 213 2 45 chr4 6208774 6209164 -178079498 - MLT2D LTR ERVL -41 373 1 301 240 54 70 chr4 6209999 6210065 -178078597 - MIR SINE MIR -11 251 186 2540 151 44 2 chr4 6210065 6210476 -178078186 + MSTA LTR MaLR 1 428 0 301 240 54 70 chr4 6210476 6210538 -178078124 - MIR SINE MIR -76 186 125 417 52 17 0 chr4 6210538 6210596 -178078066 + MSTA LTR MaLR 370 428 0 357 234 75 0 chr4 6210604 6210698 -178077964 - MIR SINE MIR -77 185 85 22 35 0 0 chr4 6211224 6211253 -178077409 + AT_rich Low_complexity Low_complexity 1 29 0 315 291 91 0 chr4 6211335 6211445 -178077217 + MIR SINE MIR 75 194 -68 481 255 41 107 chr4 6211796 6211992 -178076670 + MIR SINE MIR 16 198 -64 276 331 74 7 chr4 6212936 6213084 -178075578 + L2 LINE L2 2349 2506 -808 275 342 179 0 chr4 6213110 6213227 -178075435 - L2 LINE L2 -6 3266 3129 25 31 0 0 chr4 6214105 6214137 -178074525 + AT_rich Low_complexity Low_complexity 1 32 0 3292 109 82 25 chr4 6214201 6214772 -178073890 - MER4B LTR ERV1 -6 604 1 1408 239 55 97 chr4 6214795 6215163 -178073499 - L1ME2 LINE L1 -91 6073 5744 2701 112 43 24 chr4 6215163 6215583 -178073079 + MSTA LTR MaLR 1 428 0 1408 239 55 97 chr4 6215583 6215872 -178072790 - L1ME2 LINE L1 -420 5744 5444 231 322 35 56 chr4 6215956 6216099 -178072563 + MLT1K LTR MaLR 134 273 -315 552 314 114 43 chr4 6216376 6216726 -178071936 + L2 LINE L2 2897 3271 -1 746 269 123 8 chr4 6216830 6217223 -178071439 - LTR16C LTR ERVL -2 489 6 253 369 23 37 chr4 6217274 6217491 -178071171 + MIR SINE MIR 30 243 -19 231 290 93 9 chr4 6218900 6219007 -178069655 - MIR SINE MIR -112 150 35 293 317 48 0 chr4 6219727 6219831 -178068831 - MIR SINE MIR -104 158 50 264 300 200 4 chr4 6219903 6220143 -178068519 - L2 LINE L2 -160 3112 2826 3006 231 67 14 chr4 6220189 6221028 -178067634 + MER45B DNA AcHobo 110 992 -48 190 174 22 22 chr4 6221098 6221144 -178067518 + MIR SINE MIR 97 142 -66 401 316 53 21 chr4 6221159 6221346 -178067316 + MIR SINE MIR 1 193 -69 274 297 109 50 chr4 6221349 6221450 -178067212 + MIR SINE MIR 75 181 -81 22 0 0 0 chr4 6221504 6221526 -178067136 + AT_rich Low_complexity Low_complexity 1 22 0 1468 189 7 34 chr4 6221526 6221822 -178066840 - AluJb SINE Alu -24 288 1 482 165 0 0 chr4 6222037 6222116 -178066546 + MLT1A2 LTR MaLR 284 362 -12 2975 221 83 16 chr4 6222134 6223096 -178065566 + L1ME1 LINE L1 4834 5887 -279 2814 110 33 35 chr4 6223096 6223525 -178065137 + MSTC LTR MaLR 1 428 0 2975 221 83 16 chr4 6223525 6223822 -178064840 + L1ME1 LINE L1 5887 6163 -3 186 233 23 0 chr4 6223879 6223922 -178064740 - MIR SINE MIR -67 141 98 284 278 52 21 chr4 6223981 6224078 -178064584 - L2 LINE L2 -13 3300 3201 323 240 166 69 chr4 6224194 6224544 -178064118 + LTR33A LTR ERVL 3 386 -137 327 246 97 18 chr4 6225710 6225824 -178062838 - MLT1H LTR MaLR -3 546 424 832 283 32 18 chr4 6225824 6226107 -178062555 - L2 LINE L2 -886 2428 2142 631 279 14 40 chr4 6226231 6226453 -178062209 + Charlie8 DNA MER1_type 15 230 -2187 235 246 0 16 chr4 6226552 6226613 -178062049 + Charlie8 DNA MER1_type 2358 2417 0 324 203 0 40 chr4 6227357 6227431 -178061231 + MIR3 SINE MIR 93 163 -45 760 257 44 22 chr4 6227515 6227741 -178060921 + MIR SINE MIR 12 242 -20 769 223 76 6 chr4 6227825 6228213 -178060449 + MLT1C LTR MaLR 6 457 -10 255 342 52 11 chr4 6228394 6228543 -178060119 - MIR SINE MIR -75 133 7 197 113 38 94 chr4 6228604 6228657 -178060005 + L2 LINE L2 3264 3313 0 794 271 161 35 chr4 6229700 6230154 -178058508 - MLT1H LTR MaLR -17 532 22 2433 149 5 3 chr4 6230270 6230659 -178058003 - MLT1B LTR MaLR 0 390 1 1730 179 3 20 chr4 6231714 6232010 -178056652 + AluJo SINE Alu 1 291 -21 398 214 12 0 chr4 6232887 6232971 -178055691 - Tigger7 DNA MER2_type -6 2481 2397 * 1560 152 243 28 chr4 6232966 6233399 -178055263 - Tigger7 DNA MER2_type -1961 526 1 542 234 97 0 chr4 6233818 6233963 -178054699 + MIR SINE MIR 23 181 -81 363 267 0 0 chr4 6234187 6234262 -178054400 + MIR SINE MIR 71 145 -117 962 279 59 50 chr4 6234264 6234870 -178053792 + MLT2E LTR ERVL 1 612 -16 727 283 57 11 chr4 6235001 6235284 -178053378 - L1ME4a LINE L1 -267 5854 5559 1102 194 18 31 chr4 6236795 6237022 -178051640 - MER58A DNA MER1_type 0 224 1 474 268 65 22 chr4 6237196 6237334 -178051328 - MIR SINE MIR -97 165 22 320 233 207 7 chr4 6237562 6237712 -178050950 + MIR SINE MIR 77 256 -6 284 258 46 0 chr4 6238360 6238488 -178050174 - MIR3 SINE MIR -14 194 81 240 225 32 79 chr4 6239446 6239577 -178049085 - MIR SINE MIR -41 221 101 315 291 48 0 chr4 6241265 6241376 -178047286 + MIR SINE MIR 51 175 -33 219 220 0 0 chr4 6244377 6244427 -178044235 + A-rich Low_complexity Low_complexity 1 50 0 474 231 70 14 chr4 6245135 6245278 -178043384 + MIR SINE MIR 46 196 -66 252 248 266 9 chr4 6245855 6245968 -178042694 + MER5A DNA MER1_type 35 176 -13 191 262 24 0 chr4 6246203 6246245 -178042417 - L2 LINE L2 -19 3294 3252 264 192 77 0 chr4 6246299 6246351 -178042311 - MIR SINE MIR -138 124 69 294 338 74 26 chr4 6247715 6248106 -178040556 - L1ME4a LINE L1 -748 5398 4989 2850 13 0 0 chr4 6248112 6248421 -178040241 - AluYa5 SINE Alu -2 309 1 395 272 69 60 chr4 6249416 6249648 -178039014 - L2 LINE L2 -89 3183 2950 268 239 28 0 chr4 6250095 6250166 -178038496 - MIR3 SINE MIR -48 160 88 3486 184 41 15 chr4 6250258 6250986 -178037676 + L1MB5 LINE L1 5428 6174 0 1495 164 7 49 chr4 6250992 6251278 -178037384 + AluJo SINE Alu 3 276 -36 732 267 71 0 chr4 6251389 6251599 -178037063 - MIR SINE MIR -20 242 18 890 213 53 12 chr4 6251741 6251910 -178036752 - AluJo SINE Alu -136 176 1 2080 122 6 56 chr4 6251919 6252238 -178036424 - AluSx SINE Alu -9 303 1 238 302 0 16 chr4 6252298 6252361 -178036301 + MIR SINE MIR 201 262 0 1767 215 111 39 chr4 6252388 6252927 -178035735 - MLT1G1 LTR MaLR -12 583 6 252 369 141 0 chr4 6253001 6253199 -178035463 + MIR SINE MIR 31 256 -6 260 236 107 8 chr4 6253836 6253966 -178034696 + MIR SINE MIR 97 243 -19 467 236 189 40 chr4 6253974 6254113 -178034549 + MIR SINE MIR 10 127 -135 1935 146 0 54 chr4 6254113 6254429 -178034233 + AluJb SINE Alu 1 299 -13 467 236 189 40 chr4 6254429 6254501 -178034161 + MIR SINE MIR 127 259 -3 2027 158 0 13 chr4 6254633 6254949 -178033713 - AluJb SINE Alu 0 312 1 1144 206 71 0 chr4 6254957 6255239 -178033423 - L1MD2 LINE L1 -1 6358 6057 2097 111 0 0 chr4 6255289 6255560 -178033102 + AluSx SINE Alu 1 271 -41 2175 52 4 17 chr4 6255565 6256089 -178032573 + LTR10C LTR ERV1 11 591 0 204 97 0 0 chr4 6256104 6256135 -178032527 + (A)n Simple_repeat Simple_repeat 1 31 0 395 252 112 7 chr4 6256175 6256318 -178032344 + MIR SINE MIR 2 159 -103 262 290 12 0 chr4 6256390 6256489 -178032173 - MIR SINE MIR -75 133 33 394 299 222 14 chr4 6256529 6256736 -178031926 + MIR SINE MIR 13 262 0 26 0 0 0 chr4 6256772 6256798 -178031864 + AT_rich Low_complexity Low_complexity 1 26 0 207 319 14 0 chr4 6258147 6258219 -178030443 + MIR SINE MIR 67 139 -123 2859 16 0 0 chr4 6259149 6259460 -178029202 - AluYa5 SINE Alu 0 311 1 395 272 69 60 chr4 6260455 6260687 -178027975 - L2 LINE L2 -89 3183 2950 268 239 28 0 chr4 6261134 6261205 -178027457 - MIR3 SINE MIR -48 160 88 3486 184 41 15 chr4 6261297 6262025 -178026637 + L1MB5 LINE L1 5428 6174 0 1495 164 7 49 chr4 6262031 6262317 -178026345 + AluJo SINE Alu 3 276 -36 732 267 71 0 chr4 6262428 6262638 -178026024 - MIR SINE MIR -20 242 18 263 266 25 13 chr4 6263534 6263613 -178025049 - MIR SINE MIR -64 144 65 272 204 0 19 chr4 6263979 6264033 -178024629 + MIR SINE MIR 58 110 -152 610 198 87 17 chr4 6264150 6264322 -178024340 + MIR SINE MIR 65 248 -14 318 287 0 0 chr4 6264364 6264507 -178024155 + (CAT)n Simple_repeat Simple_repeat 1 143 0 657 230 0 0 chr4 6264560 6264738 -178023924 + (CAT)n Simple_repeat Simple_repeat 2 179 0 693 247 0 0 chr4 6264767 6265108 -178023554 + (CAT)n Simple_repeat Simple_repeat 1 341 0 396 211 0 26 chr4 6265120 6265276 -178023386 + (CAT)n Simple_repeat Simple_repeat 1 152 0 942 185 58 5 chr4 6265694 6265883 -178022779 - MLT1B LTR MaLR 0 390 192 612 185 80 25 chr4 6265963 6266125 -178022537 - MLT1B LTR MaLR -217 173 3 678 329 40 9 chr4 6266139 6266364 -178022298 - MIR SINE MIR -11 251 20 3517 176 97 130 chr4 6266486 6266600 -178022062 + Charlie1a DNA MER1_type 85 201 -2560 1446 6 0 0 chr4 6266600 6266763 -178021899 + (CTATG)n Simple_repeat Simple_repeat 3 165 0 3517 176 97 130 chr4 6266763 6267293 -178021369 + Charlie1a DNA MER1_type 201 747 -2014 2242 110 0 3 chr4 6267293 6267583 -178021079 - AluSc SINE Alu -20 289 1 3517 176 97 130 chr4 6267583 6268312 -178020350 + Charlie1a DNA MER1_type 747 1414 -1347 2296 125 0 0 chr4 6268312 6268615 -178020047 + AluSx SINE Alu 1 303 -9 3517 176 97 130 chr4 6268615 6268656 -178020006 + Charlie1a DNA MER1_type 1414 1455 0 189 297 27 14 chr4 6268662 6268736 -178019926 - MIR SINE MIR -119 143 69 557 270 94 60 chr4 6268781 6269099 -178019563 + LTR16A LTR ERVL 76 404 -46 389 184 26 0 chr4 6269617 6269693 -178018969 + MIR SINE MIR 111 188 -74 313 289 118 7 chr4 6270392 6270527 -178018135 - L3 LINE CR1 -3 1574 1425 219 216 0 0 chr4 6270823 6270860 -178017802 - L2 LINE L2 -91 3181 3145 490 242 67 36 chr4 6270958 6271123 -178017539 + MIR SINE MIR 22 191 -71 634 249 30 18 chr4 6271586 6271755 -178016907 + MIR SINE MIR 22 192 -70 727 304 98 23 chr4 6271999 6272345 -178016317 + L3 LINE CR1 1204 1575 -2 1148 261 112 8 chr4 6272372 6272766 -178015896 - MLT1J2 LTR MaLR -3 447 13 329 289 125 0 chr4 6272804 6272908 -178015754 - L2 LINE L2 0 3272 3156 183 242 97 0 chr4 6273028 6273090 -178015572 + MIR SINE MIR 105 172 -90 221 315 33 11 chr4 6273553 6273645 -178015017 - MIR SINE MIR -122 140 47 383 269 187 8 chr4 6273866 6274000 -178014662 + MIR SINE MIR 4 161 -101 331 299 173 16 chr4 6274591 6274718 -178013944 - L2 LINE L2 -3 3269 3123 346 263 76 42 chr4 6274731 6274849 -178013813 + MIR SINE MIR 80 201 -61 311 276 51 27 chr4 6275258 6275397 -178013265 + MIR SINE MIR 16 154 -65 369 288 54 9 chr4 6275446 6275557 -178013105 + L2 LINE L2 3193 3308 -5 218 200 25 0 chr4 6275559 6275599 -178013063 + L2 LINE L2 3230 3270 -2 208 347 13 13 chr4 6275694 6275769 -178012893 - MIR SINE MIR -64 144 70 540 279 79 70 chr4 6275849 6276265 -178012397 - MLT1L LTR MaLR 0 615 196 327 299 31 20 chr4 6276463 6276601 -178012061 - MIR SINE MIR -67 141 16 495 195 108 104 chr4 6276926 6277213 -178011449 + L1MC4 LINE L1 7626 7913 -129 3678 161 63 6 chr4 6277256 6277919 -178010743 + MER44D DNA MER2_type 5 705 0 244 120 40 0 chr4 6277941 6277991 -178010671 + (CATATA)n Simple_repeat Simple_repeat 5 56 0 285 258 62 55 chr4 6278011 6278139 -178010523 + L1MC4 LINE L1 7914 8042 0 27 0 0 0 chr4 6278144 6278171 -178010491 + AT_rich Low_complexity Low_complexity 1 27 0 387 0 0 0 chr4 6278598 6278641 -178010021 + (CA)n Simple_repeat Simple_repeat 1 43 0 240 230 40 27 chr4 6279402 6279476 -178009186 + L2 LINE L2 2909 2983 -289 456 244 0 0 chr4 6279765 6279855 -178008807 - MIR SINE MIR -103 159 70 469 281 64 41 chr4 6280208 6280379 -178008283 + MER63A DNA MER1_type 1 175 -35 314 270 9 52 chr4 6280411 6280526 -178008136 - MIR SINE MIR -81 181 72 236 231 0 19 chr4 6280764 6280816 -178007846 - MIR SINE MIR -108 100 50 1564 215 55 25 chr4 6281119 6281482 -178007180 + MLT1A2 LTR MaLR 1 374 0 1786 157 168 8 chr4 6281746 6282115 -178006547 + MSTA LTR MaLR 1 428 0 9598 117 19 38 chr4 6282118 6283720 -178004942 + MSTA-int LTR MaLR 4 1575 -5 1895 164 143 11 chr4 6283732 6284110 -178004552 + MSTA LTR MaLR 1 428 0 709 293 57 51 chr4 6284134 6284342 -178004320 - MLT1J LTR MaLR -157 354 142 872 110 0 52 chr4 6284342 6284478 -178004184 + FLAM_C SINE Alu 5 133 0 709 293 57 51 chr4 6284478 6284621 -178004041 - MLT1J LTR MaLR -369 142 1 199 263 0 0 chr4 6285233 6285271 -178003391 + L2 LINE L2 3251 3288 -25 226 269 39 26 chr4 6285332 6285410 -178003252 + MIR SINE MIR 184 262 0 450 295 126 46 chr4 6285445 6285730 -178002932 - L2 LINE L2 0 3272 2965 709 242 66 16 chr4 6287366 6287557 -178001105 + MIR3 SINE MIR 1 201 -7 670 223 0 17 chr4 6287569 6287861 -178000801 + (ATGGTG)n Simple_repeat Simple_repeat 1 287 0 843 204 0 0 chr4 6287863 6288099 -178000563 + (TGG)n Simple_repeat Simple_repeat 1 236 0 243 204 0 0 chr4 6288121 6288175 -178000487 + (TGG)n Simple_repeat Simple_repeat 2 55 0 374 314 72 42 chr4 6288196 6288432 -178000230 - MIR SINE MIR -19 243 1 193 362 48 19 chr4 6288632 6288737 -177999925 + L2 LINE L2 2649 2756 -558 192 348 43 17 chr4 6288803 6288918 -177999744 + L2 LINE L2 2871 2988 -284 424 265 55 61 chr4 6289064 6289245 -177999417 + MIR SINE MIR 13 192 -70 1917 166 13 7 chr4 6289635 6289937 -177998725 - AluJb SINE Alu -8 304 1 201 283 208 9 chr4 6290230 6290336 -177998326 - MIR3 SINE MIR -52 156 30 360 255 145 86 chr4 6290638 6291066 -177997596 - MLT1J LTR MaLR -58 453 1 292 273 61 11 chr4 6291314 6291438 -177997224 + MIR SINE MIR 38 166 -59 4251 274 68 31 chr4 6291438 6291670 -177996992 + L1ME1 LINE L1 22 244 -6152 1586 214 97 3 chr4 6291670 6292030 -177996632 - MSTD LTR MaLR 0 396 3 4251 274 68 31 chr4 6292030 6293789 -177994873 + L1ME1 LINE L1 244 2086 -4310 2293 245 76 27 chr4 6293792 6294344 -177994318 + L1ME1 LINE L1 4923 5446 -789 1413 199 40 34 chr4 6294344 6294640 -177994022 + AluJo SINE Alu 5 302 -10 2293 245 76 27 chr4 6294640 6295347 -177993315 + L1ME1 LINE L1 5446 6230 -5 769 248 36 18 chr4 6295492 6295744 -177992918 - MIR SINE MIR 0 262 6 1613 132 53 64 chr4 6296298 6296613 -177992049 + AluSx SINE Alu 5 316 0 2494 191 48 4 chr4 6296967 6297450 -177991212 + MLT1D LTR MaLR 1 504 -1 571 299 107 14 chr4 6297616 6297897 -177990765 + LTR16A LTR ERVL 113 419 -31 682 172 86 32 chr4 6298214 6298400 -177990262 + MLT1H1 LTR MaLR 360 555 0 340 285 30 35 chr4 6298530 6298698 -177989964 - MIR SINE MIR -18 244 76 296 296 11 0 chr4 6298724 6298812 -177989850 - L2 LINE L2 0 3313 3225 184 295 45 45 chr4 6298822 6298934 -177989728 - L2 LINE L2 -205 3108 2997 273 278 204 0 chr4 6299285 6299393 -177989269 + MIR SINE MIR 23 152 -110 319 294 84 0 chr4 6299540 6299659 -177989003 - L2 LINE L2 0 3272 3144 187 333 107 0 chr4 6299703 6299787 -177988875 - L2 LINE L2 -248 3024 2932 236 335 143 11 chr4 6299838 6300020 -177988642 - L2 LINE L2 -508 2806 2601 407 240 224 22 chr4 6300024 6300203 -177988459 - L2 LINE L2 0 3313 3099 263 240 74 25 chr4 6300570 6300691 -177987971 - L1ME3 LINE L1 -8 6154 6028 217 296 67 137 chr4 6301037 6301321 -177987341 + L2 LINE L2 2943 3206 -66 491 273 86 0 chr4 6301700 6301828 -177986834 + MIR SINE MIR 35 173 -89 21 0 0 0 chr4 6302487 6302508 -177986154 + AT_rich Low_complexity Low_complexity 1 21 0 229 258 61 0 chr4 6302678 6302744 -177985918 - MIR SINE MIR -78 184 115 187 227 0 91 chr4 6303477 6303543 -177985119 + MIR SINE MIR 64 123 -139 412 274 49 97 chr4 6303716 6303942 -177984720 + L2 LINE L2 3027 3241 -31 2067 171 28 6 chr4 6303942 6304299 -177984363 + MLT1A1 LTR MaLR 1 365 0 185 65 32 0 chr4 6304329 6304360 -177984302 + (TGAA)n Simple_repeat Simple_repeat 3 34 0 272 296 22 44 chr4 6304361 6304496 -177984166 - MIR SINE MIR -78 184 53 573 297 124 39 chr4 6305438 6305873 -177982789 + L2 LINE L2 2216 2687 -627 535 296 77 6 chr4 6305941 6306110 -177982552 - MIR SINE MIR -19 243 63 252 231 0 0 chr4 6306555 6306607 -177982055 + L1MB1 LINE L1 6119 6170 -19 408 173 0 36 chr4 6306613 6306723 -177981939 + GA-rich Low_complexity Low_complexity 4 109 0 485 242 22 67 chr4 6306740 6306918 -177981744 - MIR3 SINE MIR -9 199 30 7820 123 15 7 chr4 6307957 6309977 -177978685 + L1PA8A LINE L1 4095 6131 0 290 198 74 12 chr4 6310056 6310137 -177978525 + MIR SINE MIR 105 190 -72 273 281 0 62 chr4 6310448 6310544 -177978118 - MIR3 SINE MIR -32 176 87 2212 139 71 15 chr4 6310573 6310840 -177977822 - MSTB1 LTR MaLR -14 418 120 2700 101 0 5 chr4 6310840 6311215 -177977447 + THE1C LTR MaLR 3 375 0 2212 139 71 15 chr4 6311215 6311343 -177977319 - MSTB1 LTR MaLR -312 120 1 185 247 104 52 chr4 6311809 6311886 -177976776 + L2 LINE L2 3208 3288 -25 359 235 82 0 chr4 6313675 6313773 -177974889 - MIR SINE MIR -109 153 48 385 228 66 81 chr4 6314146 6314282 -177974380 + MIR SINE MIR 2 135 -127 317 291 10 10 chr4 6315146 6315249 -177973413 + MIR SINE MIR 77 179 -83 585 222 16 16 chr4 6315291 6315417 -177973245 + MIR SINE MIR 23 148 -114 1983 154 128 8 chr4 6315425 6315807 -177972855 + MSTA LTR MaLR 1 428 0 7867 168 45 36 chr4 6315807 6317444 -177971218 + MSTA-int LTR MaLR 1 1651 0 1952 135 141 8 chr4 6317444 6317821 -177970841 + MSTA LTR MaLR 1 427 -1 252 363 40 45 chr4 6317845 6318068 -177970594 - MIR SINE MIR -31 231 10 213 39 0 0 chr4 6318450 6318476 -177970186 + (TTCA)n Simple_repeat Simple_repeat 2 27 0 3763 157 21 30 chr4 6318559 6319326 -177969336 + L1MB3 LINE L1 5422 6181 -2 2710 90 0 6 chr4 6319479 6319845 -177968817 - THE1B LTR MaLR 0 364 1 224 161 138 46 chr4 6319913 6320000 -177968662 - MER5A DNA MER1_type -81 108 14 248 163 0 0 chr4 6320107 6320150 -177968512 - MLT2C2 LTR ERVL -2 462 420 232 109 18 18 chr4 6320153 6320208 -177968454 + (TC)n Simple_repeat Simple_repeat 2 56 0 * 314 289 7 0 chr4 6320205 6320354 -177968308 + (TCCA)n Simple_repeat Simple_repeat 3 152 0 * 429 195 11 38 chr4 6320328 6320513 -177968149 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 2466 81 0 0 chr4 6320552 6320848 -177967814 - AluY SINE Alu -13 298 3 2014 174 56 5 chr4 6320855 6321245 -177967417 - MLT2C2 LTR ERVL -50 414 5 394 293 45 19 chr4 6321252 6321409 -177967253 + MIR SINE MIR 73 233 -29 1448 243 91 7 chr4 6322003 6322422 -177966240 + MLT1C LTR MaLR 6 459 -8 206 215 46 31 chr4 6322644 6322709 -177965953 + L2 LINE L2 3236 3301 -12 395 178 22 40 chr4 6323032 6323263 -177965399 + CT-rich Low_complexity Low_complexity 1 227 0 277 255 57 28 chr4 6324289 6324395 -177964267 - MIR SINE MIR -63 145 37 236 212 45 15 chr4 6324408 6324474 -177964188 - L3 LINE CR1 -667 910 843 355 311 106 8 chr4 6324504 6324768 -177963894 - L1ME4a LINE L1 0 6121 5832 219 214 0 0 chr4 6324784 6324826 -177963836 - MIR SINE MIR -14 248 207 1813 120 53 25 chr4 6324939 6325222 -177963440 - AluJb SINE Alu -21 291 1 1295 203 77 40 chr4 6325292 6325461 -177963201 + MLT1B LTR MaLR 1 162 -228 2148 71 15 4 chr4 6325461 6325730 -177962932 + AluY SINE Alu 1 272 -39 1295 203 77 40 chr4 6325730 6325935 -177962727 + MLT1B LTR MaLR 162 389 -1 448 252 8 0 chr4 6325936 6326059 -177962603 + L1MA10 LINE L1 6204 6327 -7 445 258 104 16 chr4 6326240 6326422 -177962240 + MIR SINE MIR 63 260 -2 181 255 0 43 chr4 6326542 6326589 -177962073 - MER5A DNA MER1_type -5 184 140 418 143 12 0 chr4 6326599 6326683 -177961979 - L1PB2 LINE L1 0 6151 6067 2183 96 0 0 chr4 6326687 6326988 -177961674 + L1PB1 LINE L1 5823 6123 -28 1280 108 36 0 chr4 6326999 6327193 -177961469 - L1PB2 LINE L1 -366 5785 5585 427 303 75 11 chr4 6327476 6327664 -177960998 - MIR SINE MIR -62 200 1 5914 195 17 15 chr4 6327774 6328995 -177959667 + L1MC1 LINE L1 4285 5503 -830 2164 147 28 19 chr4 6328995 6329356 -177959306 - THE1B LTR MaLR 0 364 1 5914 195 17 15 chr4 6329356 6329892 -177958770 + L1MC1 LINE L1 5503 6049 -284 2015 164 3 0 chr4 6329892 6330202 -177958460 + AluJb SINE Alu 1 311 -1 5914 195 17 15 chr4 6330202 6330485 -177958177 + L1MC1 LINE L1 6049 6330 -3 944 246 87 48 chr4 6330495 6330726 -177957936 - MLT1I LTR MaLR 0 409 158 1955 174 0 0 chr4 6330726 6331019 -177957643 - AluJo SINE Alu -19 293 1 944 246 87 48 chr4 6331019 6331144 -177957518 - MLT1I LTR MaLR -251 158 39 251 375 10 0 chr4 6331426 6331530 -177957132 + MIR SINE MIR 41 145 -63 296 322 26 0 chr4 6331676 6331791 -177956871 + Charlie8 DNA MER1_type 118 235 -2182 353 265 8 8 chr4 6331956 6332215 -177956447 + (TG)n Simple_repeat Simple_repeat 1 259 0 229 238 0 32 chr4 6333077 6333140 -177955522 + (CAGAGA)n Simple_repeat Simple_repeat 3 63 0 229 118 39 0 chr4 6333144 6333195 -177955467 + GA-rich Low_complexity Low_complexity 1 53 0 297 311 60 20 chr4 6333790 6333941 -177954721 - MIR SINE MIR -54 208 52 442 257 164 13 chr4 6334089 6334241 -177954421 - MER5A DNA MER1_type -6 183 9 368 287 49 18 chr4 6334430 6334594 -177954068 + MIR SINE MIR 20 188 -74 992 224 38 19 chr4 6334602 6334865 -177953797 - MLT1C LTR MaLR 0 467 200 542 278 25 0 chr4 6335354 6335516 -177953146 - MER5A DNA MER1_type 0 189 24 237 327 40 40 chr4 6335511 6335612 -177953050 - MIR SINE MIR -91 171 71 * 1869 124 4 18 chr4 6336118 6336393 -177952269 + AluSx SINE Alu 41 311 -1 283 224 0 0 chr4 6337120 6337178 -177951484 + MIR SINE MIR 62 119 -143 191 146 24 0 chr4 6337544 6337585 -177951077 + (TGGG)n Simple_repeat Simple_repeat 3 44 0 227 254 53 30 chr4 6338172 6338273 -177950389 - MIR SINE MIR -58 150 47 226 234 0 0 chr4 6338631 6338678 -177949984 + MIR SINE MIR 107 153 -109 1276 216 41 84 chr4 6338870 6339356 -177949306 + MLT1C LTR MaLR 1 465 -2 2189 106 0 11 chr4 6339544 6339855 -177948807 + AluSx SINE Alu 3 310 0 2294 111 0 0 chr4 6339932 6340229 -177948433 - AluSx SINE Alu -15 297 1 284 300 114 14 chr4 6340708 6340848 -177947814 + MIR SINE MIR 59 212 -50 236 271 59 0 chr4 6340967 6341052 -177947610 + MIR SINE MIR 109 198 -64 252 298 58 41 chr4 6341815 6341936 -177946726 + MIR SINE MIR 78 200 -62 427 223 35 24 chr4 6342072 6342232 -177946430 - MIR SINE MIR 0 262 100 923 60 0 0 chr4 6342278 6342395 -177946267 + FLAM_C SINE Alu 1 117 -16 1175 269 71 35 chr4 6342395 6342914 -177945748 - L2 LINE L2 -6 3307 2776 190 342 51 0 chr4 6343111 6343190 -177945472 + MIR SINE MIR 98 180 -82 385 268 45 45 chr4 6343260 6343417 -177945245 - MIR SINE MIR -85 177 21 279 276 35 11 chr4 6344071 6344158 -177944504 + MIR3 SINE MIR 82 170 -38 1898 156 7 13 chr4 6344173 6344480 -177944182 + AluJo SINE Alu 1 305 -7 342 297 130 0 chr4 6344955 6345093 -177943569 + MIR SINE MIR 105 260 -2 217 357 84 7 chr4 6345558 6345712 -177942950 + MIR SINE MIR 49 214 -48 299 344 58 7 chr4 6346009 6346163 -177942499 + MIR3 SINE MIR 25 186 -22 262 0 26 26 chr4 6346164 6346203 -177942459 + (TTTTG)n Simple_repeat Simple_repeat 4 42 0 1679 127 27 60 chr4 6348309 6348609 -177940053 - AluJo SINE Alu -13 299 10 511 290 32 68 chr4 6348679 6348927 -177939735 + MIR SINE MIR 20 258 -4 1206 122 0 0 chr4 6351373 6351569 -177937093 + Tigger4(Zombi) DNA MER2_type 2479 2674 -57 1083 206 50 52 chr4 6351573 6351937 -177936725 + THE1C LTR MaLR 1 363 -12 189 154 0 0 chr4 6353291 6353330 -177935332 + (CA)n Simple_repeat Simple_repeat 1 39 0 820 247 94 66 chr4 6354109 6354464 -177934198 + MLT1D LTR MaLR 24 397 -108 2160 125 0 3 chr4 6354464 6354759 -177933903 - AluSx SINE Alu -18 294 1 820 247 94 66 chr4 6354759 6354872 -177933790 + MLT1D LTR MaLR 397 505 0 479 216 58 29 chr4 6354949 6355162 -177933500 - L1M LINE L1 -738 5424 5207 1080 180 149 34 chr4 6355673 6355968 -177932694 - THE1C LTR MaLR -46 329 1 520 343 30 4 chr4 6356238 6356509 -177932153 + L1MC4 LINE L1 6446 6723 -1319 181 219 0 109 chr4 6357461 6357525 -177931137 - MIR3 SINE MIR 0 208 152 901 259 214 5 chr4 6357556 6357939 -177930723 - L2 LINE L2 0 3313 2851 21 0 0 0 chr4 6358514 6358535 -177930127 + AT_rich Low_complexity Low_complexity 1 21 0 303 289 10 10 chr4 6359060 6359157 -177929505 + L1M4 LINE L1 4923 5019 -1127 2158 89 25 0 chr4 6359166 6359447 -177929215 + AluSp SINE Alu 1 288 -25 244 279 55 33 chr4 6359466 6359539 -177929123 + L1M4 LINE L1 5010 5080 -1066 2352 100 0 6 chr4 6359539 6359850 -177928812 - AluY SINE Alu -2 309 1 244 279 55 33 chr4 6359850 6359959 -177928703 + L1M4 LINE L1 5080 5196 -950 563 203 42 10 chr4 6360070 6360282 -177928380 + L1M4 LINE L1 5207 5424 -738 1027 240 92 63 chr4 6360359 6360472 -177928190 - MLT1D LTR MaLR 0 505 397 2160 125 0 3 chr4 6360472 6360767 -177927895 + AluSx SINE Alu 1 294 -18 1027 240 92 63 chr4 6360767 6361144 -177927518 - MLT1D LTR MaLR -108 397 1 3415 130 65 25 chr4 6361909 6362424 -177926238 - MER51A LTR ERV1 -9 625 81 2322 96 0 0 chr4 6362424 6362716 -177925946 - AluSq SINE Alu -21 292 1 3415 130 65 25 chr4 6362716 6362801 -177925861 - MER51A LTR ERV1 -553 81 1 1281 122 0 21 chr4 6362999 6363187 -177925475 - FRAM SINE Alu 0 176 1 340 200 147 36 chr4 6363320 6363459 -177925203 + MIR SINE MIR 2 153 -66 257 250 10 52 chr4 6363662 6363758 -177924904 + MIR SINE MIR 109 200 -62 351 113 0 0 chr4 6363806 6363859 -177924803 + (TTA)n Simple_repeat Simple_repeat 1 53 0 1207 289 36 31 chr4 6364575 6365012 -177923650 - MLT1J LTR MaLR 0 511 38 339 261 89 52 chr4 6365098 6365237 -177923425 + MIR SINE MIR 4 146 -66 731 171 0 0 chr4 6365425 6365563 -177923099 - FRAM SINE Alu 0 166 29 219 231 0 0 chr4 6365701 6365740 -177922922 - MER5A DNA MER1_type -90 99 61 1952 117 4 0 chr4 6365809 6366065 -177922597 + AluSx SINE Alu 1 257 -55 210 37 0 0 chr4 6366071 6366098 -177922564 + (CAAA)n Simple_repeat Simple_repeat 3 29 0 817 150 0 8 chr4 6366107 6366227 -177922435 - AluJb SINE Alu -84 228 110 726 139 0 0 chr4 6366341 6366456 -177922206 + AluSp/q SINE Alu 193 307 -6 480 146 9 27 chr4 6366456 6366566 -177922096 + GA-rich Low_complexity Low_complexity 1 108 0 189 0 0 0 chr4 6367294 6367315 -177921347 + (TTA)n Simple_repeat Simple_repeat 1 21 0 280 306 8 24 chr4 6368034 6368158 -177920504 + GA-rich Low_complexity Low_complexity 4 125 0 22 80 0 0 chr4 6368530 6368580 -177920082 + GC_rich Low_complexity Low_complexity 1 50 0 25 65 0 0 chr4 6368737 6368783 -177919879 + GC_rich Low_complexity Low_complexity 1 46 0 22 35 0 0 chr4 6370071 6370100 -177918562 + GC_rich Low_complexity Low_complexity 1 29 0 209 93 70 0 chr4 6370219 6370262 -177918400 + T-rich Low_complexity Low_complexity 3 48 0 236 309 40 92 chr4 6371228 6371380 -177917282 + MIR SINE MIR 119 262 0 361 257 20 61 chr4 6372073 6372221 -177916441 - MIR3 SINE MIR -26 182 41 351 65 0 0 chr4 6372305 6372351 -177916311 + (A)n Simple_repeat Simple_repeat 1 46 0 21 0 0 0 chr4 6372510 6372531 -177916131 + AT_rich Low_complexity Low_complexity 1 21 0 27 81 0 0 chr4 6372610 6372672 -177915990 + AT_rich Low_complexity Low_complexity 1 62 0 221 246 35 0 chr4 6374308 6374365 -177914297 + MIR3 SINE MIR 98 156 -52 22 106 0 0 chr4 6374687 6374772 -177913890 + GC_rich Low_complexity Low_complexity 1 85 0 319 350 34 0 chr4 6375278 6375395 -177913267 - MIR SINE MIR -122 140 20 23 54 0 0 chr4 6376071 6376108 -177912554 + GC_rich Low_complexity Low_complexity 1 37 0 356 239 17 39 chr4 6376488 6376668 -177911994 + (CA)n Simple_repeat Simple_repeat 1 176 0 405 293 88 7 chr4 6377502 6377649 -177911013 + MIR SINE MIR 33 191 -71 382 326 79 26 chr4 6378709 6378936 -177909726 - MIR SINE MIR -6 256 18 412 224 84 0 chr4 6379301 6379408 -177909254 - MIR SINE MIR -66 196 81 192 251 57 32 chr4 6379676 6379770 -177908892 - MIR SINE MIR -55 153 56 292 309 122 26 chr4 6379820 6380050 -177908612 - L2 LINE L2 -136 3177 2926 346 324 20 0 chr4 6380690 6380838 -177907824 - MIR SINE MIR -36 226 76 277 225 56 0 chr4 6380856 6380927 -177907735 + MER96 DNA MER1_type? 20 94 -81 257 304 16 11 chr4 6381185 6381364 -177907298 - MIR SINE MIR -19 243 65 2028 238 97 54 chr4 6382940 6383819 -177904843 + MER45C DNA AcHobo 5 953 0 289 254 182 39 chr4 6384385 6384566 -177904096 + L2 LINE L2 3107 3313 0 388 272 7 37 chr4 6384697 6384833 -177903829 - L2 LINE L2 -11 3302 3171 22 0 0 0 chr4 6384898 6384920 -177903742 + AT_rich Low_complexity Low_complexity 1 22 0 1057 139 0 17 chr4 6385075 6385248 -177903414 - L1PA8 LINE L1 -8 6164 5995 2113 102 0 54 chr4 6385267 6385580 -177903082 - AluSx SINE Alu -16 296 1 394 325 8 0 chr4 6385585 6385708 -177902954 - MIR SINE MIR -118 144 21 984 291 91 20 chr4 6385769 6386263 -177902399 + L2 LINE L2 2783 3312 -1 2046 126 0 36 chr4 6386266 6386575 -177902087 - AluSx SINE Alu -14 298 1 803 244 16 51 chr4 6387190 6387444 -177901218 + MIR SINE MIR 3 247 -15 280 333 56 43 chr4 6387597 6387759 -177900903 - MIR SINE MIR -76 186 23 2124 138 0 3 chr4 6388181 6388472 -177900190 - AluJb SINE Alu -22 290 1 266 265 72 66 chr4 6388482 6388663 -177899999 - MIR SINE MIR -73 189 8 35 54 0 0 chr4 6389210 6389266 -177899396 + AT_rich Low_complexity Low_complexity 1 56 0 2206 287 65 14 chr4 6389351 6390232 -177898430 - HAL1 LINE L1 0 2507 1582 530 251 151 0 chr4 6390264 6390463 -177898199 - HAL1 LINE L1 -976 1531 1303 2091 180 30 13 chr4 6390466 6390861 -177897801 + Tigger4(Zombi) DNA MER2_type 1 402 -2329 2301 101 0 0 chr4 6390866 6391162 -177897500 + AluSq SINE Alu 1 296 -17 25 31 0 0 chr4 6391162 6391194 -177897468 + AT_rich Low_complexity Low_complexity 1 32 0 2067 161 50 48 chr4 6391194 6391655 -177897007 + Tigger4(Zombi) DNA MER2_type 392 853 -1878 703 192 8 0 chr4 6391655 6391780 -177896882 + AluJ SINE Alu 1 126 -186 819 206 16 38 chr4 6391994 6392178 -177896484 + AluJ SINE Alu 116 295 -17 1263 141 0 0 chr4 6392178 6392369 -177896293 + AluSc SINE Alu 119 309 0 2482 142 21 16 chr4 6392386 6392809 -177895853 + Tigger4(Zombi) DNA MER2_type 829 1253 -1478 889 144 0 0 chr4 6392844 6392962 -177895700 - FLAM_C SINE Alu -25 118 1 5501 131 24 11 chr4 6392964 6393028 -177895634 + Tigger4(Zombi) DNA MER2_type 1237 1299 -1432 1583 183 72 11 chr4 6393028 6393330 -177895332 - AluJo SINE Alu 0 312 1 5501 131 24 11 chr4 6393330 6394177 -177894485 + Tigger4(Zombi) DNA MER2_type 1299 2160 -571 975 79 9 2 chr4 6394215 6394474 -177894188 + AluSx SINE Alu 1 304 0 1439 148 52 20 chr4 6394484 6394789 -177893873 + Tigger4(Zombi) DNA MER2_type 2178 2492 -239 2588 117 2 8 chr4 6394926 6395327 -177893335 - L1P LINE L1 -5745 401 3 248 208 31 39 chr4 6395328 6395458 -177893204 - L1MEc LINE L1 -2185 4030 3902 472 151 54 0 chr4 6395458 6395551 -177893111 - MSTB LTR MaLR 0 426 329 2825 206 20 43 chr4 6395564 6395898 -177892764 - L1MEc LINE L1 -3066 3149 2809 1616 206 7 4 chr4 6395898 6396200 -177892462 - AluJb SINE Alu 0 303 1 2825 206 20 43 chr4 6396200 6396719 -177891943 - L1MEc LINE L1 -3406 2809 2315 15003 92 1 1 chr4 6397000 6399188 -177889474 + L1P LINE L1 2814 5001 -1145 726 139 0 0 chr4 6399802 6399917 -177888745 + AluSp/q SINE Alu 193 307 -6 188 0 0 69 chr4 6399917 6399946 -177888716 + (GGA)n Simple_repeat Simple_repeat 1 27 0 37 70 0 0 chr4 6401207 6401250 -177887412 + AT_rich Low_complexity Low_complexity 1 43 0 213 194 0 0 chr4 6401460 6401496 -177887166 + (TG)n Simple_repeat Simple_repeat 1 36 0 4343 268 41 20 chr4 6401496 6402140 -177886522 - L1MEc LINE L1 -4318 2078 1449 203 0 0 36 chr4 6402140 6402168 -177886494 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 1141 196 61 88 chr4 6402172 6402468 -177886194 - AluJo SINE Alu -14 288 1 4343 268 41 20 chr4 6402468 6403413 -177885249 - L1MEc LINE L1 -4949 1447 450 382 333 7 0 chr4 6403430 6403577 -177885085 - L1MEc LINE L1 -6026 370 223 1684 171 171 16 chr4 6403623 6403992 -177884670 + MSTA LTR MaLR 1 426 -2 1488 203 51 60 chr4 6403995 6404429 -177884233 + MLT1D LTR MaLR 76 505 0 1866 244 26 2 chr4 6404431 6404891 -177883771 + MLT1D-int LTR MaLR 4 474 -897 1284 204 110 31 chr4 6404864 6405247 -177883415 - L1ME2 LINE L1 -100 6064 5652 * 235 164 46 46 chr4 6405796 6405948 -177882714 + (TA)n Simple_repeat Simple_repeat 1 152 0 943 273 94 59 chr4 6406180 6406605 -177882057 + MLT1J1 LTR MaLR 7 446 0 787 196 111 7 chr4 6406648 6406801 -177881861 + FAM SINE Alu 1 169 -6 35613 29 2 0 chr4 6406901 6411887 -177876775 + L1PA3 LINE L1 1161 6154 -1 964 286 23 0 chr4 6411858 6412162 -177876500 + L1M4 LINE L1 3928 4238 -1908 * 4827 66 11 1 chr4 6412312 6413351 -177875311 + L1PA7 LINE L1 5005 6154 0 209 122 0 24 chr4 6413692 6413733 -177874929 + (TTTTTG)n Simple_repeat Simple_repeat 3 42 0 21 0 0 0 chr4 6414114 6414135 -177874527 + AT_rich Low_complexity Low_complexity 1 21 0 293 297 50 50 chr4 6414164 6414277 -177874385 - MIR SINE MIR -74 188 73 533 243 18 0 chr4 6414277 6414388 -177874274 - MER81 DNA DNA -1 113 1 293 297 50 50 chr4 6414388 6414456 -177874206 - MIR SINE MIR -188 74 7 188 317 0 37 chr4 6414478 6414560 -177874102 - MIR SINE MIR -163 99 21 2040 80 3 45 chr4 6414851 6415137 -177873525 + AluSx SINE Alu 1 274 -38 297 118 0 0 chr4 6415245 6415296 -177873366 + (TC)n Simple_repeat Simple_repeat 2 52 0 894 272 33 22 chr4 6415647 6415919 -177872743 + MLT1J LTR MaLR 11 285 -226 302 281 26 18 chr4 6415951 6416065 -177872597 + L1MEd LINE L1 693 807 -5312 260 288 25 0 chr4 6416076 6416156 -177872506 + MLT1J LTR MaLR 313 394 -117 2434 159 23 21 chr4 6416295 6416722 -177871940 + MSTB1 LTR MaLR 1 428 -4 323 271 189 0 chr4 6416942 6417064 -177871598 - MIR SINE MIR -1 261 117 242 231 68 60 chr4 6417062 6417179 -177871483 + L2 LINE L2 2861 2978 -294 * 578 206 48 0 chr4 6417213 6417359 -177871303 - MER53 DNA DNA -8 181 29 2280 117 0 0 chr4 6417374 6417683 -177870979 - AluSc SINE Alu 0 309 1 2168 124 7 7 chr4 6417717 6418024 -177870638 - AluSx SINE Alu -5 307 1 460 287 29 86 chr4 6418028 6418342 -177870320 + L2 LINE L2 2972 3267 -5 637 279 36 0 chr4 6418525 6418744 -177869918 + MIR SINE MIR 25 251 -11 192 301 122 97 chr4 6418756 6418911 -177869751 + L2 LINE L2 2846 2996 -276 2052 114 14 0 chr4 6418911 6419191 -177869471 + AluSg SINE Alu 1 284 -26 192 301 122 97 chr4 6419191 6419427 -177869235 + L2 LINE L2 2996 3247 -25 268 330 78 28 chr4 6419834 6419999 -177868663 - MIR SINE MIR -65 143 4 250 233 0 0 chr4 6420173 6420233 -177868429 + (TTCA)n Simple_repeat Simple_repeat 2 61 0 3440 234 58 28 chr4 6420893 6420923 -177867739 - MER45B DNA AcHobo -570 1011 983 4063 113 33 6 chr4 6420923 6421568 -177867094 + L1PB2 LINE L1 5482 6143 -8 3440 234 58 28 chr4 6421568 6421658 -177867004 - MER45B DNA AcHobo -598 983 897 1980 142 26 13 chr4 6421658 6421961 -177866701 + AluSx SINE Alu 1 307 -5 3440 234 58 28 chr4 6421961 6422764 -177865898 - MER45B DNA AcHobo -684 897 59 202 329 38 0 chr4 6423950 6424029 -177864633 - MIR SINE MIR -117 145 64 287 239 5 178 chr4 6424682 6424879 -177863783 - MLT1H LTR MaLR -375 174 12 343 309 20 26 chr4 6424943 6425095 -177863567 + MIR SINE MIR 47 197 -65 467 197 12 4 chr4 6425306 6425408 -177863254 + MER2 DNA MER2_type 1 101 -138 276 30 0 0 chr4 6425515 6425548 -177863114 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 458 171 45 0 chr4 6426327 6426415 -177862247 - MIR3 SINE MIR -53 155 64 216 0 0 0 chr4 6426432 6426456 -177862206 + (TC)n Simple_repeat Simple_repeat 1 24 0 * 342 0 0 0 chr4 6426455 6426493 -177862169 + (CA)n Simple_repeat Simple_repeat 1 38 0 364 224 12 0 chr4 6427098 6427183 -177861479 + MIR SINE MIR 71 156 -106 243 61 0 0 chr4 6427723 6427756 -177860906 + (TC)n Simple_repeat Simple_repeat 1 33 0 2129 129 44 41 chr4 6428021 6428384 -177860278 - THE1B LTR MaLR 0 364 1 319 288 8 45 chr4 6428858 6428905 -177859757 - MIR3 SINE MIR -52 156 109 2048 143 12 70 chr4 6428905 6429319 -177859343 + MLT1B LTR MaLR 1 390 0 319 288 8 45 chr4 6429319 6429403 -177859259 - MIR3 SINE MIR -99 109 30 2218 101 0 20 chr4 6429585 6429891 -177858771 + AluSq SINE Alu 1 300 -13 435 282 65 77 chr4 6430124 6430372 -177858290 + MIR SINE MIR 15 259 -3 23 0 0 0 chr4 6430440 6430463 -177858199 + AT_rich Low_complexity Low_complexity 1 23 0 414 324 0 0 chr4 6431633 6431741 -177856921 - MER81 DNA DNA -6 108 1 474 259 22 22 chr4 6432100 6432239 -177856423 - MIR SINE MIR -118 144 6 248 232 101 0 chr4 6432553 6432622 -177856040 + MIR SINE MIR 117 192 -70 238 236 28 14 chr4 6432651 6432723 -177855939 - MIR SINE MIR -6 256 184 573 157 102 0 chr4 6432829 6432937 -177855725 - MER53 DNA DNA -68 121 3 776 173 161 0 chr4 6433356 6433518 -177855144 + MER5A DNA MER1_type 2 189 0 280 263 34 42 chr4 6434765 6434883 -177853779 - L2 LINE L2 -70 3243 3127 2856 239 31 50 chr4 6434975 6435429 -177853233 - L1ME1 LINE L1 -5 6161 5729 1702 154 48 0 chr4 6435429 6435702 -177852960 - AluJb SINE Alu -26 286 1 2856 239 31 50 chr4 6435702 6436136 -177852526 - L1ME1 LINE L1 -437 5729 5289 385 246 64 0 chr4 6436118 6436228 -177852434 - L1ME1 LINE L1 -1741 4405 4289 * 2085 99 18 0 chr4 6436360 6436633 -177852029 - AluSx SINE Alu -30 282 5 1589 127 0 27 chr4 6436641 6436841 -177851821 + Tigger4(Zombi) DNA MER2_type 2479 2672 -59 1919 140 64 17 chr4 6436841 6437199 -177851463 + THE1C LTR MaLR 1 375 0 1589 127 0 27 chr4 6437199 6437258 -177851404 + Tigger4(Zombi) DNA MER2_type 2672 2731 0 1125 253 111 84 chr4 6437277 6438063 -177850599 - HAL1 LINE L1 -1254 1253 447 330 210 0 25 chr4 6438243 6438324 -177850338 + MLT1C LTR MaLR 386 464 -3 282 266 9 101 chr4 6438771 6438880 -177849782 - MIR SINE MIR -74 134 36 1388 193 46 21 chr4 6439407 6439734 -177848928 + MLT1A1 LTR MaLR 31 365 0 270 145 0 157 chr4 6440365 6440448 -177848214 + MIR SINE MIR 107 176 -86 200 345 164 0 chr4 6440599 6440709 -177847953 + L2 LINE L2 3180 3307 -6 214 338 80 13 chr4 6441616 6441767 -177846895 + MIR SINE MIR 23 183 -79 237 33 0 0 chr4 6441815 6441845 -177846817 + (TG)n Simple_repeat Simple_repeat 2 31 0 364 224 0 13 chr4 6442698 6442774 -177845888 - AluJb SINE Alu 0 302 228 950 174 17 17 chr4 6442774 6442946 -177845716 - AluJb SINE Alu -140 172 1 569 312 45 0 chr4 6443213 6443415 -177845247 + MIR SINE MIR 1 211 -51 1386 222 58 51 chr4 6443434 6443885 -177844777 + MLT1D LTR MaLR 1 454 -51 338 133 17 0 chr4 6445546 6445606 -177843056 + MLT1D LTR MaLR 442 502 -3 662 157 33 0 chr4 6445828 6445949 -177842713 + MLT1D LTR MaLR 1 125 -380 1923 160 37 62 chr4 6445951 6446394 -177842268 + MLT2B2 LTR ERVL 3 414 0 420 147 0 15 chr4 6446398 6446466 -177842196 - MLT1E1 LTR MaLR -1 653 587 1832 209 27 8 chr4 6446469 6446838 -177841824 + MLT1D LTR MaLR 130 505 0 1661 205 67 14 chr4 6446931 6447302 -177841360 - MLT1E LTR MaLR 0 593 203 303 265 61 10 chr4 6447338 6447391 -177841271 - MLT1E LTR MaLR -490 103 54 1979 122 49 30 chr4 6447391 6447759 -177840903 - THE1C LTR MaLR 0 375 1 303 265 61 10 chr4 6447759 6447803 -177840859 - MLT1E LTR MaLR -539 54 1 432 255 102 13 chr4 6447908 6448065 -177840597 + MIR SINE MIR 41 211 -51 352 287 119 45 chr4 6448184 6448428 -177840234 + MLT1J LTR MaLR 5 266 -245 265 238 105 9 chr4 6448466 6448571 -177840091 + MLT1J LTR MaLR 347 461 -50 890 198 104 85 chr4 6449237 6449601 -177839061 - MLT1C LTR MaLR -96 371 1 267 274 161 32 chr4 6449633 6449943 -177838719 - MLT1K LTR MaLR -16 572 223 1605 239 67 16 chr4 6450440 6450876 -177837786 - MLT1C LTR MaLR 0 467 10 440 188 50 0 chr4 6450936 6451037 -177837625 + LTR16C LTR ERVL 385 490 -1 372 280 17 25 chr4 6451179 6451297 -177837365 - MIR SINE MIR -100 162 46 3878 161 38 56 chr4 6451552 6452195 -177836467 - L1MA7 LINE L1 -1 6290 5637 1932 140 15 82 chr4 6452195 6452595 -177836067 - THE1C LTR MaLR -2 373 1 3878 161 38 56 chr4 6452595 6452659 -177836003 - L1MA7 LINE L1 -654 5637 5573 2536 70 3 0 chr4 6452659 6452961 -177835701 - AluY SINE Alu -8 303 1 3878 161 38 56 chr4 6452961 6453092 -177835570 - L1MA7 LINE L1 -718 5573 5466 375 304 83 80 chr4 6453583 6454043 -177834619 - MLT1K LTR MaLR -22 566 106 404 241 12 0 chr4 6454134 6454217 -177834445 - HERV16 LTR ERVL -2072 2924 2841 1318 326 73 30 chr4 6454249 6455175 -177833487 - HERV16 LTR ERVL -2264 2732 1765 5647 160 28 29 chr4 6455255 6456727 -177831935 - L1MA4 LINE L1 -2 6298 4804 * 10385 177 16 3 chr4 6456726 6458783 -177829879 + L1 LINE L1 2628 4711 -1435 1103 130 0 0 chr4 6458783 6458983 -177829679 + AluSg/x SINE Alu 131 330 0 712 101 0 0 chr4 6458983 6459082 -177829580 + L1 LINE L1 4708 4806 -1340 1003 310 117 79 chr4 6459130 6460017 -177828645 - HERV16 LTR ERVL -3555 1441 748 2153 139 12 18 chr4 6460345 6460684 -177827978 + MER1B DNA MER1_type 1 337 0 383 162 0 15 chr4 6460752 6460820 -177827842 - MLT1A2 LTR MaLR 0 374 308 1645 112 75 0 chr4 6460820 6461061 -177827601 + AluSx SINE Alu 1 259 -53 1491 207 25 19 chr4 6461095 6461409 -177827253 - MLT1A2 LTR MaLR -58 316 1 471 348 65 0 chr4 6461411 6461612 -177827050 - HERV16 LTR ERVL -4761 235 22 431 250 47 8 chr4 6461619 6461747 -177826915 + MLT1A1 LTR MaLR 229 361 -4 1341 179 82 15 chr4 6462199 6462316 -177826346 + AluJo SINE Alu 1 109 -203 480 18 0 0 chr4 6462316 6462373 -177826289 + (CA)n Simple_repeat Simple_repeat 2 58 0 1341 179 82 15 chr4 6462373 6462523 -177826139 + AluJo SINE Alu 109 286 -26 779 172 208 37 chr4 6462671 6462902 -177825760 + MLT2B2 LTR ERVL 174 493 -22 392 307 114 6 chr4 6463148 6463314 -177825348 - MIR SINE MIR -75 187 4 348 321 84 11 chr4 6463969 6464159 -177824503 - MIR3 SINE MIR -2 206 3 739 298 69 40 chr4 6464647 6465094 -177823568 - LTR33 LTR ERVL 0 521 62 423 231 111 34 chr4 6465138 6465356 -177823306 + Charlie8 DNA MER1_type 83 1397 -1020 180 234 160 75 chr4 6465398 6465492 -177823170 - MIR SINE MIR -87 121 20 202 319 44 0 chr4 6466455 6466546 -177822116 + L2 LINE L2 3094 3188 -125 321 53 0 0 chr4 6466546 6466584 -177822078 + THE1C LTR MaLR 123 160 -215 * 550 186 105 24 chr4 6466572 6466696 -177821966 - THE1C LTR MaLR -241 134 1 6533 101 8 6 chr4 6466696 6467577 -177821085 - THE1C-int LTR MaLR 0 1580 698 2148 72 7 17 chr4 6467565 6467858 -177820804 - THE1C-int LTR MaLR -1290 290 1 * 2056 146 64 14 chr4 6467858 6468215 -177820447 - THE1C LTR MaLR 0 375 1 524 282 15 8 chr4 6468217 6468348 -177820314 + L2 LINE L2 3182 3313 0 219 358 123 12 chr4 6470650 6470812 -177817850 + MIR SINE MIR 79 258 -4 1088 117 0 134 chr4 6471103 6471326 -177817336 - 7SK RNA RNA 0 193 1 1663 140 59 0 chr4 6471973 6472244 -177816418 - AluSq SINE Alu -15 298 12 197 284 58 77 chr4 6472833 6472988 -177815674 + MIR3 SINE MIR 4 155 -53 372 308 6 38 chr4 6473485 6473642 -177815020 + MIR SINE MIR 45 191 -65 186 222 56 19 chr4 6473821 6473875 -177814787 + MIR3 SINE MIR 9 64 -144 2099 100 81 36 chr4 6473914 6474273 -177814389 + THE1C LTR MaLR 1 375 0 525 282 77 23 chr4 6474331 6474590 -177814072 - LTR16C LTR ERVL -4 487 215 197 269 39 0 chr4 6474800 6474852 -177813810 + MIR SINE MIR 209 262 0 327 235 15 91 chr4 6474871 6475003 -177813659 + MLT1L LTR MaLR 43 164 -451 5081 111 10 9 chr4 6475133 6476000 -177812662 - L1P3 LINE L1 -4549 1912 1051 5753 106 2 7 chr4 6476000 6476503 -177812159 + L1P LINE L1 1644 2143 -4003 3315 137 8 6 chr4 6476503 6477013 -177811649 + MER9 LTR ERVK 1 511 0 5753 106 2 7 chr4 6477013 6477341 -177811321 + L1P LINE L1 2143 2471 -3675 4118 141 34 23 chr4 6527430 6528127 -177760535 + MER44D DNA MER2_type 1 705 0 205 188 35 35 chr4 6528312 6528397 -177760265 + (TATAA)n Simple_repeat Simple_repeat 5 89 0 2811 78 54 29 chr4 6528430 6528838 -177759824 - L1PB2 LINE L1 -2 6149 5732 2087 174 50 21 chr4 6530107 6530486 -177758176 - MSTD LTR MaLR 0 396 7 269 282 26 0 chr4 6530541 6530619 -177758043 + MER102a DNA MER1_type 238 317 -13 222 323 50 20 chr4 6530730 6530829 -177757833 + MIR SINE MIR 52 153 -109 271 294 0 0 chr4 6530931 6530999 -177757663 + MIR SINE MIR 78 145 -63 181 200 44 111 chr4 6531138 6531228 -177757434 + L2 LINE L2 3228 3311 -2 311 346 43 21 chr4 6531442 6531596 -177757066 - L2 LINE L2 -15 3298 3138 2068 127 3 17 chr4 6531596 6531896 -177756766 + AluSx SINE Alu 1 296 -16 311 346 43 21 chr4 6531896 6531929 -177756733 - L2 LINE L2 -175 3138 3107 264 289 0 0 chr4 6531929 6532005 -177756657 - MLT1C LTR MaLR 0 467 392 786 127 11 33 chr4 6532230 6532411 -177756251 + (TTCC)n Simple_repeat Simple_repeat 2 178 0 1212 136 99 113 chr4 6532419 6532721 -177755941 - AluJo SINE Alu -1 311 14 233 247 0 55 chr4 6532879 6532952 -177755710 + GA-rich Low_complexity Low_complexity 4 72 0 403 173 0 13 chr4 6533662 6533737 -177754925 + MIR SINE MIR 79 152 -56 213 279 0 93 chr4 6533810 6533896 -177754766 + L3 LINE CR1 1411 1488 -89 758 80 0 9 chr4 6533933 6534045 -177754617 + (TTCC)n Simple_repeat Simple_repeat 2 112 0 1933 137 9 40 chr4 6534045 6534367 -177754295 - AluSx SINE Alu 0 312 1 245 111 44 0 chr4 6534503 6534548 -177754114 + C-rich Low_complexity Low_complexity 3 49 0 360 286 100 55 chr4 6535015 6535572 -177753090 - L1ME3A LINE L1 -273 5897 5286 * 421 284 5 58 chr4 6535564 6535681 -177752981 - L1ME3A LINE L1 -2029 4117 4012 2674 122 11 3 chr4 6535681 6536042 -177752620 + THE1B LTR MaLR 1 364 0 421 284 5 58 chr4 6536042 6536114 -177752548 - L1ME3A LINE L1 -2134 4012 3938 1352 251 61 10 chr4 6536119 6536526 -177752136 - L1ME3A LINE L1 -1 6169 5742 865 245 116 4 chr4 6536548 6536781 -177751881 - L1ME3A LINE L1 -517 5653 5395 830 166 0 21 chr4 6536782 6536927 -177751735 + FLAM_C SINE Alu 1 142 -1 958 192 12 75 chr4 6537055 6537101 -177751561 - MER33 DNA MER1_type -2359 226 179 2066 93 8 0 chr4 6537101 6537369 -177751293 - AluSx SINE Alu -12 300 31 958 192 12 75 chr4 6537369 6537562 -177751100 - MER33 DNA MER1_type -2406 179 2 448 265 80 15 chr4 6537570 6537951 -177750711 - L1ME LINE L1 -656 5508 5107 278 154 51 8 chr4 6537961 6538078 -177750584 + (TA)n Simple_repeat Simple_repeat 1 122 0 777 126 20 16 chr4 6538102 6538611 -177750051 + (TA)n Simple_repeat Simple_repeat 1 511 0 26 0 0 0 chr4 6538611 6538637 -177750025 + AT_rich Low_complexity Low_complexity 1 26 0 354 304 66 28 chr4 6538695 6538876 -177749786 + L2 LINE L2 2005 2192 -1122 433 242 160 45 chr4 6538899 6539168 -177749494 - LTR50 LTR ERVL 0 795 496 645 191 77 55 chr4 6539275 6539458 -177749204 - LTR41 LTR ERVL -586 187 1 2175 125 0 0 chr4 6539485 6539780 -177748882 - AluSx SINE Alu -17 295 1 536 362 119 21 chr4 6539781 6540361 -177748301 + L2 LINE L2 2229 2865 -449 255 284 91 26 chr4 6540477 6540613 -177748049 + L2 LINE L2 2871 3009 -263 2367 120 38 44 chr4 6540747 6541113 -177747549 - THE1B LTR MaLR 0 364 1 220 362 0 19 chr4 6541113 6541218 -177747444 + L2 LINE L2 3136 3238 -34 266 31 0 0 chr4 6541396 6541428 -177747234 - L1PB3 LINE L1 -2 6152 6121 674 92 0 0 chr4 6541428 6541515 -177747147 - MSTA LTR MaLR 0 428 342 2140 125 117 6 chr4 6541615 6541975 -177746687 - MSTA LTR MaLR -28 400 1 356 23 0 0 chr4 6541995 6542039 -177746623 + MADE1 DNA Mariner 36 79 -1 290 54 0 143 chr4 6542049 6542105 -177746557 - MADE1 DNA Mariner -32 48 1 1599 149 32 0 chr4 6542105 6542354 -177746308 - L1PB3 LINE L1 -58 6096 5840 221 312 37 18 chr4 6542356 6542465 -177746197 - MIR SINE MIR -73 189 79 580 203 63 76 chr4 6542524 6542761 -177745901 + MER113 DNA MER1_type? 6 239 -282 546 191 8 63 chr4 6542782 6542908 -177745754 - L1MA9 LINE L1 -115 6197 6079 842 93 0 0 chr4 6543101 6543209 -177745453 - AluY SINE Alu -5 306 199 1091 213 30 0 chr4 6543421 6543656 -177745006 + MIR SINE MIR 6 247 -15 572 296 47 24 chr4 6543694 6543907 -177744755 + MIR SINE MIR 16 233 -29 589 258 76 15 chr4 6544418 6544616 -177744046 + MLT1B LTR MaLR 6 215 -175 * 1192 275 120 14 chr4 6544589 6545022 -177743640 - MER45B DNA AcHobo -560 480 2 559 242 136 70 chr4 6545369 6545988 -177742674 + L2 LINE L2 2545 3206 -107 2326 131 18 15 chr4 6545994 6546330 -177742332 + MER1B DNA MER1_type 1 337 0 407 320 8 8 chr4 6546354 6546476 -177742186 + L2 LINE L2 3178 3299 -14 210 71 0 0 chr4 6546477 6546505 -177742157 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 1014 274 123 33 chr4 6546518 6546942 -177741720 - MLT1K LTR MaLR -114 474 13 240 349 151 18 chr4 6546994 6547160 -177741502 + L2 LINE L2 3083 3270 -2 769 259 61 64 chr4 6548246 6548559 -177740103 + MLT1I LTR MaLR 10 321 -88 1268 164 33 109 chr4 6548582 6548751 -177739911 - AluJb SINE Alu 0 312 132 241 26 26 26 chr4 6548751 6548790 -177739872 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1268 164 33 109 chr4 6548790 6548804 -177739858 - AluJb SINE Alu -180 132 119 2107 95 0 0 chr4 6548804 6549077 -177739585 - AluSx SINE Alu -39 273 1 1268 164 33 109 chr4 6549077 6549221 -177739441 - AluJb SINE Alu -193 119 9 448 171 13 0 chr4 6549222 6549298 -177739364 + MLT1I LTR MaLR 333 409 0 971 255 92 84 chr4 6549312 6550006 -177738656 - L1MEc LINE L1 -2070 4145 3439 2145 112 3 0 chr4 6550006 6550292 -177738370 - AluSp SINE Alu -26 287 1 971 255 92 84 chr4 6550292 6550618 -177738044 - L1MEc LINE L1 -2776 3439 3117 636 314 87 22 chr4 6550660 6551523 -177737139 - L1MEc LINE L1 -4639 1757 839 303 293 121 57 chr4 6551948 6552105 -177736557 - L1MEc LINE L1 -5901 304 138 236 345 85 20 chr4 6552152 6552352 -177736310 + L2 LINE L2 1707 1919 -1395 1145 83 0 13 chr4 6552526 6552703 -177735959 - AluY SINE Alu 0 306 132 810 161 8 0 chr4 6552803 6552933 -177735729 - AluJo SINE Alu -177 135 5 374 259 46 8 chr4 6552938 6553069 -177735593 - MER103 DNA DNA -24 142 7 258 269 45 0 chr4 6553861 6553928 -177734734 - L2 LINE L2 -3 3310 3241 610 313 28 14 chr4 6553956 6554167 -177734495 - MIR SINE MIR -7 255 42 2219 74 0 14 chr4 6555191 6555488 -177733174 + AluY SINE Alu 1 293 -18 494 310 105 0 chr4 6555770 6555941 -177732721 + MIR SINE MIR 2 190 -72 383 223 106 11 chr4 6556144 6556238 -177732424 + L2 LINE L2 3210 3312 -1 554 306 19 0 chr4 6556318 6556478 -177732184 + MIR SINE MIR 96 258 -4 379 273 11 0 chr4 6556759 6556847 -177731815 - L2 LINE L2 0 3272 3184 4998 159 39 5 chr4 6556847 6557703 -177730959 + L1MC1 LINE L1 5415 6299 -34 1597 72 0 10 chr4 6557718 6557925 -177730737 - L1PA6 LINE L1 -1 6153 5949 375 289 90 74 chr4 6557959 6558336 -177730326 - L2 LINE L2 -78 3235 2853 448 200 90 44 chr4 6558959 6559111 -177729551 - MER63A DNA MER1_type 0 210 50 295 146 0 0 chr4 6559162 6559203 -177729459 - MER63A DNA MER1_type -169 41 1 389 338 46 0 chr4 6559204 6559355 -177729307 + MIR SINE MIR 53 210 -52 211 280 187 9 chr4 6560238 6560345 -177728317 + L2 LINE L2 3121 3246 -26 205 384 59 27 chr4 6560377 6560596 -177728066 - L2 LINE L2 -53 3219 2994 * 453 309 8 8 chr4 6560567 6560690 -177727972 + L2 LINE L2 3150 3272 0 390 325 69 46 chr4 6560695 6561094 -177727568 - L2 LINE L2 -262 3010 2595 1809 171 53 13 chr4 6561659 6562039 -177726623 - L1MA9 LINE L1 0 6312 5918 325 310 8 23 chr4 6562445 6562574 -177726088 - MIR SINE MIR -62 146 20 349 268 109 91 chr4 6563128 6563393 -177725269 + L2 LINE L2 3036 3305 -8 196 291 89 0 chr4 6563476 6563555 -177725107 + L2 LINE L2 3137 3222 -50 2529 125 48 17 chr4 6563721 6564136 -177724526 - MSTA LTR MaLR 0 428 1 637 144 0 65 chr4 6564146 6564285 -177724377 - FRAM SINE Alu -4 172 43 1948 122 7 0 chr4 6564499 6564785 -177723877 + AluSx SINE Alu 1 288 -24 910 284 107 3 chr4 6564882 6565237 -177723425 + MER113 DNA MER1_type? 20 411 -110 238 182 0 23 chr4 6565371 6565415 -177723247 + CT-rich Low_complexity Low_complexity 3 45 0 225 0 0 0 chr4 6565423 6565448 -177723214 + (T)n Simple_repeat Simple_repeat 1 25 0 2061 106 0 0 chr4 6565529 6565853 -177722809 + AluSg SINE Alu 1 324 0 228 217 51 0 chr4 6566173 6566240 -177722422 - Charlie8 DNA MER1_type -2 2415 1345 254 328 38 15 chr4 6566531 6566662 -177722000 + L2 LINE L2 3075 3208 -105 320 263 41 36 chr4 6566819 6567013 -177721649 - L1M4 LINE L1 -2164 3982 3788 256 283 157 18 chr4 6567274 6567440 -177721222 - L1ME LINE L1 -438 5683 5495 283 149 15 60 chr4 6568108 6568146 -177720516 - Tigger3(Golem) DNA MER2_type -138 2900 2865 2830 3 0 0 chr4 6568146 6568458 -177720204 + AluYb8 SINE Alu 1 312 -6 283 149 15 60 chr4 6568458 6568486 -177720176 - Tigger3(Golem) DNA MER2_type -173 2865 2837 447 228 33 0 chr4 6569061 6569153 -177719509 - MLT1J LTR MaLR -321 190 96 273 284 0 14 chr4 6569165 6569239 -177719423 + L2 LINE L2 3200 3272 0 244 309 128 0 chr4 6569330 6569424 -177719238 - MIR SINE MIR -3 259 154 1570 266 93 70 chr4 6569476 6569949 -177718713 + L2 LINE L2 2061 2522 -791 1578 181 3 19 chr4 6569949 6570259 -177718403 + AluJb SINE Alu 5 309 -3 1570 266 93 70 chr4 6570259 6570770 -177717892 + L2 LINE L2 2522 3066 -247 3510 111 14 2 chr4 6570770 6571277 -177717385 - L1PA8A LINE L1 -1530 4616 4104 6487 88 2 2 chr4 6571290 6572799 -177715863 + L1PA8A LINE L1 4596 6130 -1 237 310 14 0 chr4 6572900 6572971 -177715691 - L2 LINE L2 0 3313 3242 768 198 213 55 chr4 6573095 6573443 -177715219 + MLT1C LTR MaLR 7 409 -58 2032 114 19 13 chr4 6573443 6573618 -177715044 - AluSx SINE Alu -3 309 130 2058 113 17 3 chr4 6573618 6573918 -177714744 - AluSq SINE Alu -9 304 1 2032 114 19 13 chr4 6573918 6574049 -177714613 - AluSx SINE Alu -182 130 1 462 256 125 30 chr4 6574054 6574222 -177714440 + MIR SINE MIR 48 231 -31 1144 97 0 0 chr4 6574510 6574664 -177713998 - AluSg/x SINE Alu -4 306 153 2109 85 64 5 chr4 6574675 6575036 -177713626 - LTR7 LTR ERV1 0 450 25 1037 139 6 6 chr4 6575036 6575208 -177713454 - AluSq SINE Alu -141 172 1 490 264 35 39 chr4 6575221 6575405 -177713257 - MIR SINE MIR -72 136 3 419 229 50 57 chr4 6575503 6575643 -177713019 - MIR SINE MIR -10 252 114 252 0 0 0 chr4 6575733 6575761 -177712901 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 270 193 72 48 chr4 6576244 6576327 -177712335 + MIR3 SINE MIR 87 171 -37 204 330 0 10 chr4 6576727 6576824 -177711838 + CT-rich Low_complexity Low_complexity 1 96 0 392 243 14 62 chr4 6577910 6578054 -177710608 + MIR SINE MIR 80 216 -46 195 293 98 9 chr4 6578158 6578346 -177710316 - MIR SINE MIR -2 260 12 2116 79 14 0 chr4 6579022 6579337 -177709325 + AluSq SINE Alu 1 319 0 350 330 75 74 chr4 6579463 6580017 -177708645 - L2 LINE L2 0 3272 2715 412 209 9 43 chr4 6580240 6580355 -177708307 + HsTC2 DNA Tc2 1780 1890 -8 653 264 22 33 chr4 6580827 6581009 -177707653 - MIR SINE MIR -48 214 35 185 194 0 0 chr4 6581092 6581128 -177707534 - L2 LINE L2 -16 3256 3221 438 265 75 90 chr4 6581200 6581532 -177707130 - MLT1J LTR MaLR -75 436 110 543 232 113 33 chr4 6581564 6581715 -177706947 + MER5A DNA MER1_type 1 163 -26 446 255 47 0 chr4 6582139 6582245 -177706417 + MER81 DNA DNA 2 112 -2 401 277 37 28 chr4 6583154 6583351 -177705311 - MIR SINE MIR -6 256 18 269 295 13 26 chr4 6584068 6584146 -177704516 - L2 LINE L2 0 3272 3196 455 294 88 44 chr4 6584152 6584424 -177704238 - L2 LINE L2 0 3313 3030 374 275 181 28 chr4 6584503 6584856 -177703806 - L2 LINE L2 -462 2852 2446 191 188 0 0 chr4 6586141 6586173 -177702489 - MIR SINE MIR -107 155 124 776 153 11 17 chr4 6586312 6586489 -177702173 + GA-rich Low_complexity Low_complexity 3 178 0 290 203 16 0 chr4 6586673 6586737 -177701925 + MIR SINE MIR 61 125 -137 402 268 109 55 chr4 6586737 6586957 -177701705 + Charlie8 DNA MER1_type 1 232 -2185 226 383 9 9 chr4 6587106 6587221 -177701441 + L2 LINE L2 2946 3060 -212 185 150 0 25 chr4 6587328 6587368 -177701294 + (CA)n Simple_repeat Simple_repeat 2 40 0 1753 179 152 29 chr4 6587437 6587885 -177700777 + MLT1D LTR MaLR 1 503 -2 353 282 52 69 chr4 6588086 6588260 -177700402 + MIR SINE MIR 20 190 -72 1040 270 72 17 chr4 6588570 6589015 -177699647 + MLT1H LTR MaLR 28 549 0 587 278 139 10 chr4 6589714 6589923 -177698739 + MIR SINE MIR 20 255 -7 22 0 0 0 chr4 6590471 6590493 -177698169 + AT_rich Low_complexity Low_complexity 1 22 0 269 224 37 82 chr4 6590703 6590837 -177697825 - L1ME4a LINE L1 -21 6100 5973 241 349 9 0 chr4 6591052 6591158 -177697504 + L2 LINE L2 3206 3312 -1 1890 150 0 0 chr4 6591181 6591468 -177697194 - AluSx SINE Alu -25 287 1 285 318 56 24 chr4 6591765 6591891 -177696771 + L2 LINE L2 3142 3271 -1 1331 126 0 11 chr4 6591950 6592141 -177696521 - Tigger2 DNA MER2_type -1 2717 2529 1562 181 0 7 chr4 6592149 6592425 -177696237 - AluJo SINE Alu -33 279 6 3414 128 65 5 chr4 6592428 6592982 -177695680 - Tigger2 DNA MER2_type -1572 1146 560 821 206 16 27 chr4 6593098 6593282 -177695380 + MLT1C LTR MaLR 286 467 0 286 313 52 10 chr4 6593312 6593408 -177695254 - MIR3 SINE MIR 0 208 109 206 289 52 41 chr4 6593823 6593920 -177694742 - L3 LINE CR1 -1471 106 9 290 256 35 0 chr4 6594111 6594197 -177694465 + MLT1K LTR MaLR 153 241 -347 1814 234 48 87 chr4 6594386 6595009 -177693653 + L1ME3A LINE L1 5546 6144 -26 313 318 129 30 chr4 6595036 6595269 -177693393 + L3 LINE CR1 1191 1446 -131 711 299 45 9 chr4 6595872 6596096 -177692566 - MIR SINE MIR -29 233 2 297 311 112 13 chr4 6596144 6596295 -177692367 - MIR SINE MIR -52 156 14 273 311 46 48 chr4 6596541 6596707 -177691955 + MIR SINE MIR 49 216 -46 458 202 67 29 chr4 6596843 6596947 -177691715 - L2 LINE L2 -8 3305 3198 342 269 175 29 chr4 6597004 6597175 -177691487 - MIR SINE MIR -14 248 53 213 225 14 28 chr4 6597302 6597373 -177691289 + (CAGGT)n Simple_repeat Simple_repeat 5 74 0 977 275 116 40 chr4 6598384 6598644 -177690018 - L2 LINE L2 0 3313 3074 1082 164 19 14 chr4 6598644 6598851 -177689811 - MER3 DNA MER1_type 0 209 2 977 275 116 40 chr4 6598851 6599331 -177689331 - L2 LINE L2 -239 3074 2516 373 269 71 39 chr4 6599333 6599515 -177689147 - MLT1L LTR MaLR -90 525 338 2248 178 17 19 chr4 6600321 6600691 -177687971 + MLT2D LTR ERVL 1 371 -43 417 81 0 0 chr4 6600691 6600753 -177687909 + (TCTG)n Simple_repeat Simple_repeat 3 64 0 2248 178 17 19 chr4 6600753 6600797 -177687865 + MLT2D LTR ERVL 371 414 0 407 288 72 0 chr4 6601838 6601977 -177686685 + MIR SINE MIR 111 259 -3 459 52 0 0 chr4 6602378 6602436 -177686226 + (TCCA)n Simple_repeat Simple_repeat 1 58 0 362 329 56 31 chr4 6602439 6602600 -177686062 - L2 LINE L2 -22 3250 3086 781 223 53 75 chr4 6602959 6603278 -177685384 - L1ME2 LINE L1 -10 6390 6079 676 220 81 52 chr4 6603279 6603661 -177685001 - L1ME2 LINE L1 -812 5570 5178 1660 209 37 92 chr4 6603727 6604301 -177684361 - MLT2B3 LTR ERVL -12 542 1 3859 253 51 30 chr4 6604302 6605905 -177682757 - L1ME2 LINE L1 -1266 5116 3480 1973 251 58 9 chr4 6605912 6606685 -177681977 - L1ME2 LINE L1 -3065 3317 2507 484 270 25 15 chr4 6606745 6606945 -177681717 - L1ME2 LINE L1 -3804 2578 2377 775 308 25 46 chr4 6607086 6607855 -177680807 - L1ME2 LINE L1 -4243 2320 1416 1010 284 48 13 chr4 6607875 6608351 -177680311 - L1ME2 LINE L1 -5231 1141 649 271 258 2 28 chr4 6609389 6609467 -177679195 + MIR SINE MIR 78 154 -54 286 203 0 0 chr4 6609987 6610046 -177678616 + MER96 DNA MER1_type? 117 175 0 729 318 59 3 chr4 6610063 6610384 -177678278 - LTR16C LTR ERVL -9 482 144 225 222 69 42 chr4 6610643 6610715 -177677947 - MIR SINE MIR -81 181 108 205 347 59 59 chr4 6610883 6611102 -177677560 + MIR SINE MIR 9 227 -35 743 269 43 18 chr4 6611138 6611813 -177676849 + L1M4 LINE L1 3921 4808 -1338 1995 124 3 10 chr4 6611869 6612175 -177676487 - AluSq SINE Alu -9 304 1 213 344 131 0 chr4 6612370 6612492 -177676170 + L2 LINE L2 3132 3269 -3 225 333 82 41 chr4 6612582 6612801 -177675861 + L2 LINE L2 2750 2977 -337 458 316 80 30 chr4 6613926 6614163 -177674499 + L2 LINE L2 2243 2491 -823 1218 275 92 49 chr4 6614318 6615893 -177672769 - L1MEc LINE L1 -3372 2708 1001 225 94 0 0 chr4 6615893 6615925 -177672737 + (TG)n Simple_repeat Simple_repeat 1 32 0 1218 275 92 49 chr4 6615925 6616292 -177672370 - L1MEc LINE L1 -5079 1001 651 252 235 0 0 chr4 6616398 6616466 -177672196 - L1MEc LINE L1 -5162 908 841 273 273 0 122 chr4 6616640 6616812 -177671850 - L1MEc LINE L1 -5551 519 369 353 217 11 11 chr4 6617603 6617695 -177670967 - MLT1G LTR MaLR 0 590 499 373 295 30 42 chr4 6617995 6618232 -177670430 - L1ME LINE L1 -298 5823 5590 327 323 24 8 chr4 6618775 6618899 -177669763 + L2 LINE L2 3187 3312 -1 231 323 32 0 chr4 6619141 6619234 -177669428 - MER117 DNA MER1_type -87 110 15 927 286 78 30 chr4 6619552 6620014 -177668648 - MLT1L LTR MaLR -9 606 123 431 304 46 11 chr4 6620858 6621121 -177667541 - L1ME LINE L1 -301 5820 5549 1259 180 0 86 chr4 6621428 6621755 -177666907 - L1MA9 LINE L1 -277 6035 5737 * 3300 250 62 34 chr4 6621754 6623020 -177665642 - L1M2 LINE L1 -4469 1742 456 609 278 140 36 chr4 6623205 6623683 -177664979 - L1ME4a LINE L1 -1 6120 5593 391 289 71 47 chr4 6623868 6624079 -177664583 + MIR SINE MIR 35 250 -12 1973 149 3 3 chr4 6624251 6624547 -177664115 - AluSx SINE Alu -16 296 1 470 260 133 17 chr4 6624827 6625008 -177663654 + MIR SINE MIR 47 248 -14 205 176 0 0 chr4 6625108 6625142 -177663520 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 253 331 99 8 chr4 6625359 6625480 -177663182 + L2 LINE L2 3171 3302 -11 375 273 123 68 chr4 6625668 6625961 -177662701 + LTR16A1 LTR ERVL 147 455 -2 276 300 0 0 chr4 6626102 6626182 -177662480 - MIR SINE MIR -70 138 59 225 19 0 113 chr4 6626200 6626253 -177662409 + (TTTTTG)n Simple_repeat Simple_repeat 2 48 0 2249 126 0 0 chr4 6626259 6626568 -177662094 - AluSg SINE Alu 0 310 2 2246 181 22 84 chr4 6626673 6627220 -177661442 + MLT2B2 LTR ERVL 3 515 0 261 0 0 0 chr4 6627505 6627534 -177661128 + (TG)n Simple_repeat Simple_repeat 1 29 0 640 290 6 0 chr4 6628801 6628977 -177659685 + MER58A DNA MER1_type 3 179 -45 2488 113 5 24 chr4 6629022 6629393 -177659269 + THE1B LTR MaLR 1 364 0 597 178 0 52 chr4 6629794 6629929 -177658733 - MLT1I LTR MaLR -2 407 280 303 325 180 0 chr4 6630228 6630422 -177658240 - MIR SINE MIR -13 249 21 1836 193 0 7 chr4 6631020 6631325 -177657337 - AluJo SINE Alu -9 303 1 336 161 0 0 chr4 6632005 6632067 -177656595 + CT-rich Low_complexity Low_complexity 6 67 0 243 313 87 35 chr4 6632365 6632480 -177656182 + L2 LINE L2 3127 3247 -25 417 224 9 19 chr4 6632599 6632706 -177655956 - AluJb SINE Alu -14 298 193 372 252 57 32 chr4 6632819 6632942 -177655720 + L2 LINE L2 2622 2747 -567 409 281 104 48 chr4 6633330 6633584 -177655078 - L1M4 LINE L1 -918 5228 4990 2237 115 131 11 chr4 6633584 6633966 -177654696 + MSTA LTR MaLR 1 428 0 409 281 104 48 chr4 6633966 6634174 -177654488 - L1M4 LINE L1 -1156 4990 4740 335 298 63 99 chr4 6635287 6635589 -177653073 - L3 LINE CR1 -2 1575 1285 1012 191 5 11 chr4 6635622 6635811 -177652851 - MER5A DNA MER1_type -1 188 1 330 300 67 110 chr4 6635840 6636257 -177652405 - L2 LINE L2 -39 3233 2835 470 274 20 13 chr4 6637648 6637801 -177650861 - MLT1I LTR MaLR -399 156 3 243 250 0 0 chr4 6637803 6637855 -177650807 - L2 LINE L2 -599 2715 2664 287 348 129 0 chr4 6637970 6638171 -177650491 - L2 LINE L2 -608 2706 2480 201 292 135 0 chr4 6639209 6639298 -177649364 - MIR SINE MIR -141 121 21 483 339 81 30 chr4 6639923 6640221 -177648441 - L2 LINE L2 0 3272 2960 359 331 140 29 chr4 6640257 6640535 -177648127 - L2 LINE L2 -450 2864 2556 923 212 33 113 chr4 6641298 6641340 -177647322 + MLT1A1 LTR MaLR 1 45 -320 1724 111 0 0 chr4 6641340 6641565 -177647097 + AluSc SINE Alu 77 301 -8 923 212 33 113 chr4 6641565 6641919 -177646743 + MLT1A1 LTR MaLR 45 365 0 6880 209 65 35 chr4 6641919 6643220 -177645442 + MLT1A1-int LTR MaLR 1 1365 -370 2480 69 0 13 chr4 6643220 6643524 -177645138 + AluY SINE Alu 1 300 -11 6880 209 65 35 chr4 6643524 6643907 -177644755 + MLT1A1-int LTR MaLR 1365 1735 0 254 297 79 10 chr4 6644518 6644619 -177644043 + MIR SINE MIR 150 257 -5 435 228 24 0 chr4 6644702 6644825 -177643837 - Charlie1 DNA MER1_type 0 2761 2636 1974 115 44 0 chr4 6644825 6645122 -177643540 + AluSx SINE Alu 1 309 0 349 186 0 0 chr4 6645176 6645235 -177643427 + MER44D DNA MER2_type 2 60 -645 2481 196 24 29 chr4 6646037 6646589 -177642073 + MER44D DNA MER2_type 2 605 0 3756 275 119 22 chr4 6646596 6648114 -177640548 - Charlie1 DNA MER1_type -180 2581 917 1117 114 14 55 chr4 6648122 6648231 -177640431 - Tigger1 DNA MER2_type -8 2410 2313 2121 125 3 0 chr4 6648231 6648527 -177640135 + AluSq SINE Alu 1 297 -16 1117 114 14 55 chr4 6648527 6648637 -177640025 - Tigger1 DNA MER2_type -105 2313 2200 584 211 0 32 chr4 6648633 6648756 -177639906 - Tigger1 DNA MER2_type -2279 139 21 * 1801 212 76 58 chr4 6648753 6648846 -177639816 - Charlie1 DNA MER1_type -1832 929 839 616 157 20 0 chr4 6648846 6648948 -177639714 + L1PB4 LINE L1 6041 6144 -12 1801 212 76 58 chr4 6648948 6649529 -177639133 - Charlie1 DNA MER1_type -1922 839 243 831 151 0 22 chr4 6649529 6649668 -177638994 - AluSp/q SINE Alu -4 309 174 724 229 82 26 chr4 6649668 6649724 -177638938 - Charlie1 DNA MER1_type -2509 252 201 2317 113 3 0 chr4 6649724 6650035 -177638627 - AluSx SINE Alu 0 312 1 724 229 82 26 chr4 6650035 6650209 -177638453 - Charlie1 DNA MER1_type -2560 201 9 243 232 219 66 chr4 6650700 6650851 -177637811 + L2 LINE L2 3099 3272 0 2067 142 0 13 chr4 6650875 6651191 -177637471 + AluSx SINE Alu 1 312 0 402 273 8 0 chr4 6651523 6651644 -177637018 - L2 LINE L2 -1 3271 3150 1261 212 117 40 chr4 6651664 6652117 -177636545 - Charlie4a DNA MER1_type -20 488 1 355 285 12 12 chr4 6652411 6652576 -177636086 + L1ME4a LINE L1 5705 5869 -252 24 0 0 0 chr4 6652827 6652851 -177635811 + AT_rich Low_complexity Low_complexity 1 24 0 273 345 152 0 chr4 6653178 6653369 -177635293 + MIR SINE MIR 15 234 -28 380 185 85 85 chr4 6653389 6653519 -177635143 - MER103 DNA DNA -34 132 3 3251 240 83 20 chr4 6653661 6654489 -177634173 + L1MB7 LINE L1 -254 625 -5655 3149 233 66 17 chr4 6654476 6656320 -177632342 + L1MB7 LINE L1 1177 3215 -3167 * 1222 91 22 4 chr4 6656317 6656589 -177632073 + L1MA2 LINE L1 5909 6224 -80 * 1523 116 13 0 chr4 6656589 6656822 -177631840 + L1MA2 LINE L1 6069 6304 0 2243 252 18 31 chr4 6656829 6657270 -177631392 + L1MB7 LINE L1 3199 3629 -2753 6307 71 8 21 chr4 6657270 6658431 -177630231 - L1PA8A LINE L1 0 6131 5007 2311 86 41 0 chr4 6658431 6658723 -177629939 - AluY SINE Alu -7 304 1 6307 71 8 21 chr4 6658723 6658936 -177629726 - L1PA8A LINE L1 -1124 5007 4793 2243 252 18 31 chr4 6658936 6659213 -177629449 + L1MB7 LINE L1 3629 3908 -2474 3735 184 47 34 chr4 6659219 6660268 -177628394 + L1MB7 LINE L1 5313 6369 -51 1353 163 50 48 chr4 6660268 6660309 -177628353 - MSTA LTR MaLR 0 364 325 2309 99 0 10 chr4 6660309 6660621 -177628041 + AluSx SINE Alu 1 309 -3 1353 163 50 48 chr4 6660621 6660951 -177627711 - MSTA LTR MaLR -39 325 1 2587 142 36 11 chr4 6661057 6661502 -177627160 + Tigger2 DNA MER2_type 3 458 -2260 881 19 9 0 chr4 6661502 6661608 -177627054 + L1PA4 LINE L1 5872 5978 -177 315 102 0 85 chr4 6661710 6661769 -177626893 + Alu SINE Alu 242 295 -6 969 210 210 4 chr4 6661802 6662074 -177626588 - MLT1D LTR MaLR 0 505 178 1152 150 117 0 chr4 6662074 6662287 -177626375 - L1PA15 LINE L1 -11 6154 5917 * 1708 117 29 4 chr4 6662267 6662541 -177626121 + L1PA15 LINE L1 5624 5904 -261 753 214 60 11 chr4 6662541 6662723 -177625939 - MLT1D LTR MaLR -314 191 1 672 315 25 36 chr4 6662745 6663137 -177625525 - L2 LINE L2 -222 3091 2703 960 261 54 51 chr4 6664125 6664682 -177623980 + L2 LINE L2 2739 3308 -5 210 232 54 0 chr4 6664816 6664872 -177623790 + MIR SINE MIR 129 187 -75 21 0 0 0 chr4 6665318 6665339 -177623323 + AT_rich Low_complexity Low_complexity 1 21 0 1438 230 68 20 chr4 6666275 6666464 -177622198 - MLT1C LTR MaLR 0 467 289 2796 94 3 0 chr4 6666464 6666827 -177621835 - THE1B LTR MaLR 0 364 1 1438 230 68 20 chr4 6666827 6667033 -177621629 - MLT1C LTR MaLR -178 289 53 211 304 0 0 chr4 6668241 6668297 -177620365 + GA-rich Low_complexity Low_complexity 2 57 0 848 279 66 0 chr4 6668344 6668616 -177620046 + L1M4 LINE L1 4671 4960 -1186 1483 246 46 7 chr4 6669213 6669646 -177619016 - MLT1E2 LTR MaLR 0 626 138 191 235 0 29 chr4 6669824 6669892 -177618770 + (CATA)n Simple_repeat Simple_repeat 1 66 0 254 228 0 76 chr4 6670553 6670645 -177618017 + MIR SINE MIR 164 248 -14 183 80 0 0 chr4 6670696 6670721 -177617941 + (TGG)n Simple_repeat Simple_repeat 1 25 0 2086 170 18 5 chr4 6670730 6671113 -177617549 + MLT1B LTR MaLR 1 388 -2 879 189 0 8 chr4 6671867 6672132 -177616530 + (TGAG)n Simple_repeat Simple_repeat 1 262 0 858 175 0 0 chr4 6672140 6672317 -177616345 + (TGAA)n Simple_repeat Simple_repeat 3 179 0 759 189 0 0 chr4 6672323 6672539 -177616123 + (TGAG)n Simple_repeat Simple_repeat 1 216 0 427 278 67 51 chr4 6672941 6673254 -177615408 + L2 LINE L2 2940 3257 -56 284 295 11 11 chr4 6673263 6673358 -177615304 + (CATATA)n Simple_repeat Simple_repeat 5 99 0 2007 106 81 34 chr4 6673372 6673729 -177614933 + THE1C LTR MaLR 2 375 0 280 199 18 41 chr4 6673770 6673941 -177614721 + (CATATA)n Simple_repeat Simple_repeat 2 168 0 229 220 0 0 chr4 6673949 6673999 -177614663 - L1MC4 LINE L1 -1341 6701 6652 290 209 18 45 chr4 6674034 6674166 -177614496 + (CATATA)n Simple_repeat Simple_repeat 1 128 0 189 0 0 0 chr4 6675137 6675158 -177613504 + (A)n Simple_repeat Simple_repeat 1 21 0 448 270 101 64 chr4 6675163 6675459 -177613203 - L2 LINE L2 -88 3225 2919 223 218 55 0 chr4 6675489 6675544 -177613118 + L2 LINE L2 3201 3258 -14 229 234 172 0 chr4 6675622 6675686 -177612976 + MIR SINE MIR 48 122 -140 2128 151 29 0 chr4 6676415 6676793 -177611869 - MLT1B LTR MaLR -1 389 1 283 169 0 34 chr4 6677241 6677300 -177611362 - MLT2D LTR ERVL 0 520 464 229 150 0 0 chr4 6677279 6677319 -177611343 + LTR66 LTR ERVL 396 435 -175 * 320 253 38 0 chr4 6677320 6677399 -177611263 + L1MC4 LINE L1 6613 6694 -1348 342 242 0 42 chr4 6677403 6677498 -177611164 + L1MC4 LINE L1 6613 6703 -1339 315 269 0 21 chr4 6677501 6677594 -177611068 + L1MC4 LINE L1 6613 6703 -1339 216 185 0 0 chr4 6677596 6677650 -177611012 + (TATATG)n Simple_repeat Simple_repeat 6 59 0 1292 235 34 6 chr4 6677682 6678005 -177610657 - MLT2D LTR ERVL -82 332 1 277 266 0 0 chr4 6678145 6678209 -177610453 - MIR SINE MIR -80 182 119 416 305 134 21 chr4 6678482 6678810 -177609852 - L2 LINE L2 0 3313 2949 222 313 16 0 chr4 6678954 6679018 -177609644 + L2 LINE L2 3203 3267 -5 367 269 60 15 chr4 6679129 6679263 -177609399 - MLT1L LTR MaLR 0 615 476 262 252 33 105 chr4 6679253 6679461 -177609201 - MLT1J LTR MaLR -185 391 212 * 387 0 0 0 chr4 6681376 6681419 -177607243 + (TG)n Simple_repeat Simple_repeat 2 44 0 1406 221 30 29 chr4 6681949 6682324 -177606338 - MLT1C LTR MaLR -22 604 69 692 251 16 5 chr4 6682324 6682511 -177606151 - MLT1A2 LTR MaLR 0 374 186 251 227 120 0 chr4 6682524 6682599 -177606063 - MIR SINE MIR -129 133 50 263 270 81 18 chr4 6682794 6682905 -177605757 - MIR3 SINE MIR -76 132 15 254 173 0 19 chr4 6684145 6684197 -177604465 + MIR SINE MIR 106 156 -106 1536 244 73 5 chr4 6684384 6684794 -177603868 + MLT1C LTR MaLR 21 458 -9 276 304 144 31 chr4 6685222 6685416 -177603246 + MIR SINE MIR 31 246 -16 936 288 104 18 chr4 6685474 6685926 -177602736 - LTR16C LTR ERVL 0 491 1 301 303 42 48 chr4 6685944 6686109 -177602553 + L2 LINE L2 3109 3272 0 225 244 0 0 chr4 6687266 6687311 -177601351 + L2 LINE L2 3213 3257 -15 448 259 85 80 chr4 6687785 6688183 -177600479 - L1ME4a LINE L1 -45 6076 5677 43999 45 3 0 chr4 6688306 6694433 -177594229 - L1PA4 LINE L1 0 6155 15 2229 141 0 0 chr4 6694436 6694741 -177593921 - AluSq SINE Alu -8 305 1 255 241 45 54 chr4 6694913 6695025 -177593637 + MIR SINE MIR 81 191 -71 2100 144 32 29 chr4 6695098 6695472 -177593190 - THE1C LTR MaLR 0 375 1 10256 126 37 3 chr4 6695472 6697000 -177591662 - THE1C-int LTR MaLR 0 1580 1 2178 123 24 39 chr4 6697000 6697381 -177591281 - THE1C LTR MaLR 0 375 1 1110 123 10 62 chr4 6697525 6697658 -177591004 - Tigger1 DNA MER2_type -1236 1182 1061 2256 105 3 13 chr4 6697658 6697973 -177590689 + AluSp SINE Alu 1 312 -1 1110 123 10 62 chr4 6697973 6698034 -177590628 - Tigger1 DNA MER2_type -1357 1061 998 448 161 62 0 chr4 6698041 6698122 -177590540 - Tigger1 DNA MER2_type -2062 356 271 4937 147 6 5 chr4 6698123 6698903 -177589759 - Tigger1 DNA MER2_type -1422 996 216 388 108 82 13 chr4 6699046 6699204 -177589458 + (TAGA)n Simple_repeat Simple_repeat 4 172 0 246 279 105 0 chr4 6699286 6699372 -177589290 - MLT1K LTR MaLR -7 581 487 253 247 155 0 chr4 6699406 6699503 -177589159 - MLT1K LTR MaLR -181 407 296 267 295 29 79 chr4 6699522 6699661 -177589001 - MLT1K LTR MaLR -413 175 44 269 223 308 2 chr4 6699960 6700081 -177588581 - MIR SINE MIR -105 157 2 189 321 0 0 chr4 6700664 6700720 -177587942 + MIR SINE MIR 30 85 -177 811 258 148 27 chr4 6700724 6700907 -177587755 + MLT1A2 LTR MaLR 1 160 -214 351 0 0 0 chr4 6700907 6700946 -177587716 + (CA)n Simple_repeat Simple_repeat 2 40 0 811 258 148 27 chr4 6700946 6701092 -177587570 + MLT1A2 LTR MaLR 160 370 -4 7307 128 34 16 chr4 6701119 6702029 -177586633 - Tigger1 DNA MER2_type 0 2418 1481 2356 95 10 0 chr4 6702029 6702335 -177586327 - AluSx SINE Alu -3 309 1 7307 128 34 16 chr4 6702335 6702588 -177586074 - Tigger1 DNA MER2_type -937 1481 1234 3277 107 32 6 chr4 6702780 6703246 -177585416 + MER1A DNA MER1_type 52 529 0 529 266 101 35 chr4 6703292 6703649 -177585013 - L1MC4a LINE L1 -621 7234 6884 1159 282 112 22 chr4 6703659 6704212 -177584450 - L1ME3A LINE L1 -4 6166 5564 463 291 89 24 chr4 6704197 6704444 -177584218 - L1ME3A LINE L1 -2448 3698 3436 * 217 325 26 26 chr4 6704931 6705048 -177583614 - MIR3 SINE MIR -2 206 90 186 103 0 0 chr4 6705054 6705083 -177583579 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 6575 197 25 20 chr4 6705254 6707540 -177581122 + L1PB4 LINE L1 3861 6156 0 1350 279 78 0 chr4 6707569 6707952 -177580710 - LTR16C LTR ERVL 0 491 79 1407 235 118 30 chr4 6708010 6708483 -177580179 - MLT2B2 LTR ERVL 0 515 1 280 277 204 0 chr4 6708655 6708792 -177579870 - L2 LINE L2 0 3313 3149 557 238 47 29 chr4 6708796 6708827 -177579835 + MLT1I LTR MaLR 232 261 -148 2406 164 6 6 chr4 6708827 6709192 -177579470 + MLT1A1 LTR MaLR 1 365 0 557 238 47 29 chr4 6709192 6709332 -177579330 + MLT1I LTR MaLR 261 406 -3 535 279 99 97 chr4 6709392 6709499 -177579163 + L2 LINE L2 2723 2828 -444 2462 104 16 65 chr4 6709499 6709882 -177578780 - THE1B LTR MaLR 0 364 1 535 279 99 97 chr4 6709882 6710331 -177578331 + L2 LINE L2 2828 3272 0 280 241 71 36 chr4 6711633 6711745 -177576917 + MIR SINE MIR 74 189 -73 201 74 0 0 chr4 6711951 6711978 -177576684 + (CA)n Simple_repeat Simple_repeat 1 27 0 717 199 7 21 chr4 6712005 6712146 -177576516 + MER45 DNA AcHobo 1 139 -901 629 170 54 34 chr4 6712148 6712295 -177576367 - L1MA8 LINE L1 -14 6277 6128 4733 161 20 15 chr4 6712295 6713182 -177575480 - L1 LINE L1 -1379 4767 3876 295 259 64 59 chr4 6713201 6713421 -177575241 - L1MC/D LINE L1 -2332 5476 5256 3155 180 3 7 chr4 6713580 6714175 -177574487 - L1 LINE L1 -2249 3897 3305 443 318 74 52 chr4 6714175 6714581 -177574081 + L2 LINE L2 2876 3290 -23 690 176 6 80 chr4 6714698 6714874 -177573788 - MER106B DNA MER1_type -1 1058 896 200 347 68 32 chr4 6716521 6716711 -177571951 + L2 LINE L2 2862 3058 -214 281 266 145 24 chr4 6716910 6717034 -177571628 + MIR SINE MIR 40 178 -84 200 233 0 0 chr4 6717184 6717227 -177571435 + T-rich Low_complexity Low_complexity 1 43 0 331 316 66 15 chr4 6717660 6717796 -177570866 - MER5B DNA MER1_type -31 147 5 1873 140 90 36 chr4 6718437 6718793 -177569869 - THE1C LTR MaLR 0 375 1 3398 117 21 46 chr4 6718793 6719355 -177569307 - THE1C-int LTR MaLR 0 1580 1033 1776 163 21 0 chr4 6769355 6769638 -177519024 - AluSx SINE Alu -23 289 1 26 64 0 0 chr4 6769700 6769747 -177518915 + AT_rich Low_complexity Low_complexity 1 47 0 552 311 77 30 chr4 6769838 6770398 -177518264 - L1ME4a LINE L1 -206 5915 5330 2708 23 0 3 chr4 6770533 6770842 -177517820 - L1PA4 LINE L1 -312 5843 5536 1823 36 22 0 chr4 6770842 6771065 -177517597 + L1P LINE L1 4986 5213 -933 9497 23 17 1 chr4 6771938 6773338 -177515324 - L1P1 LINE L1 -502 5653 4234 2281 81 0 7 chr4 6773438 6773735 -177514927 - L1P2 LINE L1 -383 5771 5477 1417 94 0 0 chr4 6773737 6773918 -177514744 + L1PA5 LINE L1 5970 6150 -4 1518 119 16 67 chr4 6773918 6774171 -177514491 + MSTA LTR MaLR 189 428 0 304 264 114 21 chr4 6774491 6774631 -177514031 + MIR SINE MIR 61 213 -49 333 321 9 9 chr4 6774711 6774823 -177513839 + MIR SINE MIR 4 115 -147 5175 132 17 11 chr4 6775173 6775724 -177512938 - L1PA15 LINE L1 -2 6163 5604 2309 115 0 0 chr4 6775724 6776029 -177512633 - AluSx SINE Alu -7 305 1 5175 132 17 11 chr4 6776029 6776281 -177512381 - L1PA15 LINE L1 -561 5604 5355 1667 253 87 31 chr4 6776404 6777360 -177511302 - L1M1 LINE L1 -4148 3417 2423 1658 155 33 39 chr4 6777354 6777690 -177510972 + L1MA7 LINE L1 5780 6113 -178 * 3147 168 73 16 chr4 6777690 6778255 -177510407 + MER44D DNA MER2_type 3 599 -106 502 263 32 5 chr4 6778268 6778401 -177510261 - MER2 DNA MER2_type -87 152 8 602 164 29 10 chr4 6778409 6778513 -177510149 + MER44D DNA MER2_type 599 704 -1 874 154 51 0 chr4 6778522 6778678 -177509984 + L1MA7 LINE L1 6123 6286 -5 2778 54 0 9 chr4 6778951 6779282 -177509380 + L1PA5 LINE L1 5824 6151 -3 4351 173 23 34 chr4 6779740 6780670 -177507992 - L1P LINE L1 -829 5317 4399 440 145 12 24 chr4 6781633 6781716 -177506946 - THE1C LTR MaLR -293 82 1 278 307 79 11 chr4 6781717 6781906 -177506756 - MER113 DNA MER1_type? -318 203 2 266 148 19 0 chr4 6782833 6782887 -177505775 + GA-rich Low_complexity Low_complexity 1 55 0 1184 247 50 15 chr4 6783461 6783862 -177504800 + HAL1 LINE L1 781 1195 -1312 2154 101 0 71 chr4 6784032 6784369 -177504293 + AluSq SINE Alu 1 313 0 1236 196 57 25 chr4 6784705 6785167 -177503495 - L1MC/D LINE L1 -749 5633 5258 2863 235 81 87 chr4 6785281 6785357 -177503305 - L1MC/D LINE L1 -1085 5297 5222 2229 110 0 0 chr4 6785357 6785649 -177503013 - AluSq SINE Alu -21 292 1 2863 235 81 87 chr4 6785649 6786883 -177501779 - L1MC/D LINE L1 -1160 5222 3995 2391 68 6 3 chr4 6787141 6787452 -177501210 + AluSx SINE Alu 1 312 0 875 276 85 65 chr4 6787939 6788399 -177500263 - MLT1J LTR MaLR -42 469 1 530 227 153 0 chr4 6788692 6788842 -177499820 + MIR SINE MIR 41 213 -49 298 210 49 0 chr4 6788842 6788923 -177499739 + MIR SINE MIR 129 213 -49 298 210 49 0 chr4 6788923 6789004 -177499658 + MIR SINE MIR 129 213 -49 323 262 71 8 chr4 6789004 6789130 -177499532 + MIR SINE MIR 129 262 0 310 319 60 64 chr4 6790267 6790502 -177498160 + MIR SINE MIR 28 261 -1 4825 98 0 12 chr4 6790636 6791296 -177497366 - L1P3 LINE L1 -5804 657 6 1669 206 27 0 chr4 6791434 6791807 -177496855 - L1 LINE L1 -1112 5034 4652 5653 190 10 22 chr4 6791810 6792985 -177495677 + L1 LINE L1 3470 4630 -1516 2698 236 48 38 chr4 6792995 6793945 -177494717 - L1 LINE L1 -2166 3980 3021 466 237 95 27 chr4 6793925 6794187 -177494475 - L1MC/D LINE L1 -3961 2423 2144 * 321 177 89 48 chr4 6794212 6794336 -177494326 - L1MC4 LINE L1 0 8042 7914 * 581 307 42 3 chr4 6794319 6794625 -177494037 - L1M4 LINE L1 -947 5199 4882 3333 115 8 123 chr4 6794658 6795308 -177493354 - L1PB2 LINE L1 -7 6144 5570 5554 217 9 12 chr4 6795408 6796658 -177492004 - L1PB2 LINE L1 -906 5240 3995 2061 63 7 7 chr4 6796762 6797031 -177491631 - AluSx SINE Alu -29 283 15 1577 158 31 54 chr4 6797031 6797348 -177491314 - MER31B LTR ERV1 -156 310 1 692 265 64 15 chr4 6797471 6797675 -177490987 - MER58A DNA MER1_type -9 215 2 972 239 80 84 chr4 6799025 6799459 -177489203 - MLT2B1 LTR ERVL -8 512 71 1153 205 216 3 chr4 6799728 6800103 -177488559 + MLT1C LTR MaLR 10 464 -3 1031 227 58 73 chr4 6800106 6800285 -177488377 + MER113 DNA MER1_type? 32 212 -309 1568 213 56 34 chr4 6800285 6800642 -177488020 - MLT1A1 LTR MaLR 0 365 1 1031 227 58 73 chr4 6800642 6800859 -177487803 + MER113 DNA MER1_type? 212 422 -99 30626 111 11 15 chr4 6801079 6806687 -177481975 + L1PA8 LINE L1 589 6172 0 3079 152 12 44 chr4 6806687 6807470 -177481192 + L1PA16 LINE L1 5031 5783 -383 790 144 68 0 chr4 6807470 6807601 -177481061 + L1PA16 LINE L1 6025 6165 -1 2749 241 75 15 chr4 6807604 6807647 -177481015 + L1MB7 LINE L1 3973 4012 -2134 202 0 91 0 chr4 6807647 6807680 -177480982 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 2749 241 75 15 chr4 6807680 6808508 -177480154 + L1MB7 LINE L1 4012 4896 -1250 640 276 60 0 chr4 6808515 6808765 -177479897 - L1M4 LINE L1 -1456 4690 4426 237 213 0 0 chr4 6808770 6808817 -177479845 + L1PA12 LINE L1 6116 6162 -6 28 29 0 0 chr4 6808834 6808869 -177479793 + AT_rich Low_complexity Low_complexity 1 35 0 530 221 39 0 chr4 6808870 6808974 -177479688 + Tigger3(Golem) DNA MER2_type 1 108 -2921 * 1598 121 55 16 chr4 6808961 6809268 -177479394 + Tigger3(Golem) DNA MER2_type 2273 2591 -438 240 167 0 0 chr4 6809268 6809310 -177479352 - L1PA13 LINE L1 -6343 444 403 2023 122 0 0 chr4 6809320 6809606 -177479056 + L1PA15 LINE L1 5879 6164 -1 1710 58 0 108 chr4 6809613 6809871 -177478791 + AluY SINE Alu 1 230 -81 356 275 0 0 chr4 6809871 6809962 -177478700 - L1ME LINE L1 -699 5465 5375 252 89 44 0 chr4 6809973 6810018 -177478644 + Alu SINE Alu 255 301 0 * 2716 150 48 17 chr4 6809998 6810457 -177478205 + Tigger3(Golem) DNA MER2_type 2557 3029 0 3936 191 58 36 chr4 6810457 6811707 -177476955 + L1MB7 LINE L1 4899 6175 -9 306 217 28 85 chr4 6811717 6811823 -177476839 + L1MC4a LINE L1 5880 5979 -1829 2164 227 88 64 chr4 6812004 6812363 -177476299 + L1ME3A LINE L1 5317 5666 -504 2462 73 0 0 chr4 6812363 6812664 -177475998 + AluSg SINE Alu 1 301 -9 2164 227 88 64 chr4 6812664 6813129 -177475533 + L1ME3A LINE L1 5666 6161 -9 1607 117 68 19 chr4 6813258 6813523 -177475139 - MLT1B LTR MaLR 0 390 113 1457 150 31 8 chr4 6813966 6814220 -177474442 - Tigger2 DNA MER2_type -1 2717 2458 2410 129 47 3 chr4 6814273 6814638 -177474024 - Tigger2 DNA MER2_type -1966 752 372 1816 99 8 4 chr4 6814741 6814994 -177473668 - L1PA8 LINE L1 -51 6121 5868 1949 126 136 79 chr4 6815024 6815389 -177473273 + MSTA LTR MaLR 1 393 -35 2192 123 0 13 chr4 6815389 6815698 -177472964 - AluSx SINE Alu -7 305 1 1949 126 136 79 chr4 6815698 6815737 -177472925 + MSTA LTR MaLR 393 428 0 9112 146 56 22 chr4 6815739 6817266 -177471396 + MSTA-int LTR MaLR 3 1580 0 2096 141 147 8 chr4 6817266 6817641 -177471021 + MSTA LTR MaLR 1 427 -1 993 308 51 45 chr4 6817663 6818172 -177470490 - L1MEd LINE L1 -5596 523 12 188 234 21 0 chr4 6818373 6818420 -177470242 - L2 LINE L2 0 3313 3266 227 387 124 13 chr4 6819828 6820053 -177468609 - L2 LINE L2 -339 2975 2726 201 349 19 0 chr4 6820074 6820180 -177468482 - L2 LINE L2 -299 2973 2866 2229 91 0 17 chr4 6820254 6820552 -177468110 - AluY SINE Alu -18 293 1 339 340 27 0 chr4 6820552 6820699 -177467963 - MIR SINE MIR 0 262 112 384 293 153 27 chr4 6820765 6821099 -177467563 + L2 LINE L2 2594 2969 -345 256 278 88 36 chr4 6821127 6821321 -177467341 - LTR67 LTR ERVL -2 555 352 303 260 42 31 chr4 6821376 6821472 -177467190 - LTR67 LTR ERVL -369 188 92 245 279 72 27 chr4 6821625 6821736 -177466926 + L2 LINE L2 3182 3297 -16 355 178 55 0 chr4 6821828 6821901 -177466761 - MER116 DNA Mariner 0 80 4 433 254 54 15 chr4 6822558 6822688 -177465974 + MIR SINE MIR 79 213 -49 244 288 0 0 chr4 6822725 6822784 -177465878 + MIR SINE MIR 204 262 0 821 180 0 0 chr4 6823501 6823623 -177465039 + FLAM_C SINE Alu 2 123 -20 227 198 75 23 chr4 6824422 6824513 -177464149 + MIR SINE MIR 85 147 -61 257 294 88 0 chr4 6825174 6825276 -177463386 - L2 LINE L2 -26 3246 3136 742 279 12 59 chr4 6825330 6825520 -177463142 + MIR SINE MIR 21 198 -64 2061 146 0 0 chr4 6825520 6825822 -177462840 + AluSx SINE Alu 1 302 -10 742 279 12 59 chr4 6825822 6825885 -177462777 + MIR SINE MIR 198 262 0 214 289 0 0 chr4 6825895 6825947 -177462715 - L2 LINE L2 -191 3081 3030 1131 186 48 5 chr4 6825963 6826173 -177462489 - MER20 DNA MER1_type 0 219 1 27 0 0 0 chr4 6827045 6827072 -177461590 + AT_rich Low_complexity Low_complexity 1 27 0 13798 139 36 14 chr4 6827995 6830260 -177458402 - Tigger1 DNA MER2_type -81 2337 24 425 103 0 17 chr4 6830375 6830433 -177458229 + AluJ/FLAM SINE Alu 2 58 -254 319 317 60 12 chr4 6831015 6831182 -177457480 + L2 LINE L2 3096 3270 -2 481 208 285 27 chr4 6831621 6831881 -177456781 - MLT1G1 LTR MaLR -24 571 245 355 260 12 8 chr4 6832255 6832380 -177456282 + MIR3 SINE MIR 70 196 -12 828 264 57 31 chr4 6833307 6833659 -177455003 + HAL1 LINE L1 2 362 -2145 4528 44 2 0 chr4 6833676 6834195 -177454467 - L1PA3 LINE L1 -3 6152 5633 11417 35 1 1 chr4 6834295 6835677 -177452985 - L1PA3 LINE L1 -2076 4070 2689 1397 301 118 27 chr4 6835678 6836631 -177452031 + HAL1 LINE L1 360 1398 -1109 255 271 57 0 chr4 6836634 6836704 -177451958 + HAL1 LINE L1 1434 1507 -1000 1690 189 6 31 chr4 6836704 6837022 -177451640 - AluJb SINE Alu 0 312 3 1494 262 75 74 chr4 6837057 6837966 -177450696 + HAL1 LINE L1 1596 2505 -2 2912 185 24 2 chr4 6838574 6839083 -177449579 + MLT2B1 LTR ERVL 1 520 0 257 192 0 39 chr4 6839327 6839379 -177449283 + MARNA DNA Mariner 64 113 -473 249 317 38 59 chr4 6839404 6839590 -177449072 + MIR SINE MIR 46 227 -35 343 316 53 36 chr4 6839628 6839853 -177448809 - MARNA DNA Mariner -173 413 185 200 253 0 35 chr4 6840483 6840570 -177448092 + (TA)n Simple_repeat Simple_repeat 1 84 0 203 189 57 0 chr4 6840615 6840668 -177447994 - MIR SINE MIR -58 204 149 6721 150 40 9 chr4 6840773 6843777 -177444885 - L1PBa LINE L1 -2396 4466 1311 618 115 353 0 chr4 6843779 6843901 -177444761 - L1PBa LINE L1 -5704 1159 995 * 1203 143 10 0 chr4 6843897 6844093 -177444569 - L1PBa LINE L1 -6665 198 1 209 311 66 9 chr4 6844098 6844204 -177444458 + MIR SINE MIR 82 193 -69 423 305 31 16 chr4 6844291 6844419 -177444243 + L2 LINE L2 3180 3309 -4 7515 148 15 24 chr4 6844427 6845568 -177443094 + L1MA5 LINE L1 3984 5135 -1165 2224 120 0 0 chr4 6845568 6845869 -177442793 + AluSx SINE Alu 1 301 -11 7515 148 15 24 chr4 6845869 6847063 -177441599 + L1MA5 LINE L1 5135 6298 -2 1615 247 50 8 chr4 6847063 6847586 -177441076 + L1M4 LINE L1 3080 3624 -2522 29 47 0 0 chr4 6847586 6847629 -177441033 + AT_rich Low_complexity Low_complexity 1 43 0 407 202 59 17 chr4 6847823 6847942 -177440720 - L1M4 LINE L1 -1015 5131 5008 22 0 0 0 chr4 6847942 6847964 -177440698 + AT_rich Low_complexity Low_complexity 1 22 0 5969 25 3 9 chr4 6847970 6848638 -177440024 - L1PA3 LINE L1 0 6155 5492 537 198 58 0 chr4 6848640 6848761 -177439901 + L1M4 LINE L1 3619 3746 -2400 290 273 114 30 chr4 6849064 6849196 -177439466 + L2 LINE L2 3171 3313 0 262 180 34 79 chr4 6849213 6849302 -177439360 - MIR SINE MIR 0 262 178 203 250 50 0 chr4 6849999 6850059 -177438603 - MIR SINE MIR -12 250 188 367 284 132 56 chr4 6850066 6850263 -177438399 - MIR SINE MIR -3 259 48 269 206 0 15 chr4 6850374 6850442 -177438220 + (CATATA)n Simple_repeat Simple_repeat 1 67 0 329 264 195 38 chr4 6851209 6851368 -177437294 - MIR3 SINE MIR -4 204 21 578 243 104 30 chr4 6851859 6852061 -177436601 + MIR SINE MIR 46 262 0 221 338 68 0 chr4 6852463 6852537 -177436125 + L2 LINE L2 3101 3179 -93 335 286 209 5 chr4 6852606 6852812 -177435850 + MIR SINE MIR 10 257 -5 410 333 117 0 chr4 6853581 6853752 -177434910 + L2 LINE L2 2771 2961 -353 5367 258 116 29 chr4 6853794 6855718 -177432944 + L1ME LINE L1 816 2573 -4368 984 229 19 19 chr4 6855718 6855928 -177432734 - MER63A DNA MER1_type 0 210 1 5367 258 116 29 chr4 6855928 6856432 -177432230 + L1ME LINE L1 2573 3032 -3909 2340 103 0 3 chr4 6856432 6856742 -177431920 - AluY SINE Alu -2 309 1 5367 258 116 29 chr4 6856742 6857853 -177430809 + L1ME LINE L1 3032 4833 -2108 588 161 0 0 chr4 6857886 6857979 -177430683 + HY3 scRNA scRNA 4 96 -5 1257 217 56 57 chr4 6857999 6858153 -177430509 + L1ME LINE L1 5967 6120 -841 1753 151 57 17 chr4 6858153 6858451 -177430211 - AluSx SINE Alu -2 310 1 1257 217 56 57 chr4 6858451 6858798 -177429864 + L1ME LINE L1 6120 6473 -488 674 155 30 37 chr4 6859159 6859392 -177429270 + AluJb SINE Alu 35 312 0 366 274 183 0 chr4 6859839 6860003 -177428659 - MIR SINE MIR 0 262 69 218 311 120 24 chr4 6860954 6861084 -177427578 + MIR SINE MIR 77 228 -34 2107 159 26 34 chr4 6861084 6861462 -177427200 - THE1C LTR MaLR 0 375 1 218 311 120 24 chr4 6861462 6861498 -177427164 + MIR SINE MIR 228 259 -3 510 257 11 75 chr4 6861681 6861868 -177426794 + MLT1D LTR MaLR 14 188 -438 14925 205 70 13 chr4 6861868 6861923 -177426739 + L1MA4A LINE L1 5 55 -6950 1915 136 59 56 chr4 6861923 6862297 -177426365 + THE1C LTR MaLR 1 375 0 14925 205 70 13 chr4 6862297 6865395 -177423267 + L1MA4A LINE L1 55 2974 -4031 189 0 0 0 chr4 6865395 6865416 -177423246 + (CAA)n Simple_repeat Simple_repeat 2 22 0 14925 205 70 13 chr4 6865416 6868603 -177420059 + L1MA4A LINE L1 2974 6746 -259 2073 123 3 0 chr4 6868603 6868887 -177419775 - AluSx SINE Alu -27 285 1 14925 205 70 13 chr4 6868887 6869156 -177419506 + L1MA4A LINE L1 6746 6998 -7 27 29 0 0 chr4 6869156 6869190 -177419472 + AT_rich Low_complexity Low_complexity 1 34 0 924 184 161 11 chr4 6869203 6869473 -177419189 + MLT1D LTR MaLR 216 502 -3 217 267 105 23 chr4 6869476 6869562 -177419100 + MIR SINE MIR 159 251 -11 1091 204 13 44 chr4 6869862 6870087 -177418575 - MER20 DNA MER1_type 0 219 2 929 200 44 62 chr4 6870515 6870790 -177417872 - MLT1C LTR MaLR -197 270 1 2122 109 0 3 chr4 6871038 6871321 -177417341 + AluSq SINE Alu 2 283 -30 226 196 0 0 chr4 6871323 6871369 -177417293 - L1MC4 LINE L1 -1339 6703 6658 468 150 0 0 chr4 6871369 6871449 -177417213 + (CA)n Simple_repeat Simple_repeat 2 81 0 276 158 0 0 chr4 6873007 6873064 -177415598 + (CA)n Simple_repeat Simple_repeat 2 58 0 429 205 0 0 chr4 6873623 6873740 -177414922 + (TCCA)n Simple_repeat Simple_repeat 1 117 0 828 272 99 60 chr4 6873758 6874374 -177414288 - L2 LINE L2 -37 3276 2641 1294 115 0 0 chr4 6874974 6875157 -177413505 + AluSp SINE Alu 129 311 -2 2933 156 71 15 chr4 6875164 6875701 -177412961 - L1MB2 LINE L1 -10 6161 5595 1242 167 34 0 chr4 6875729 6875933 -177412729 - AluJb SINE Alu -47 265 55 533 266 198 54 chr4 6876772 6877140 -177411522 - LTR33A LTR ERVL -10 513 93 194 231 0 0 chr4 6877441 6877480 -177411182 + L2 LINE L2 3194 3232 -40 263 289 40 40 chr4 6878347 6878496 -177410166 + L2 LINE L2 2685 2833 -481 353 306 127 33 chr4 6878697 6878942 -177409720 - MLT1K LTR MaLR -182 406 139 24 32 0 0 chr4 6879184 6879215 -177409447 + AT_rich Low_complexity Low_complexity 1 31 0 2165 95 0 7 chr4 6879215 6879499 -177409163 - AluSq SINE Alu -31 282 1 233 371 86 54 chr4 6879502 6879723 -177408939 + L2 LINE L2 3022 3249 -23 191 333 19 29 chr4 6880719 6880824 -177407838 + MIR SINE MIR 46 149 -113 2010 121 4 4 chr4 6881544 6881849 -177406813 - AluSx SINE Alu 0 305 1 719 145 69 0 chr4 6881852 6881983 -177406679 + L1MB2 LINE L1 6028 6167 -4 359 252 17 17 chr4 6881991 6882106 -177406556 + MIR SINE MIR 135 249 -13 1209 87 0 0 chr4 6882110 6882259 -177406403 - AluSg SINE Alu -161 149 1 956 264 97 19 chr4 6882379 6882914 -177405748 - L1M4 LINE L1 -2803 3343 2767 260 287 121 45 chr4 6883132 6883289 -177405373 - L2 LINE L2 0 3272 3104 1491 253 55 30 chr4 6883603 6884112 -177404550 - L1ME3 LINE L1 -1 6161 5640 315 281 26 18 chr4 6884264 6884378 -177404284 - MIR3 SINE MIR -24 184 70 236 271 169 34 chr4 6885013 6885131 -177403531 + L2 LINE L2 3139 3272 0 720 222 0 0 chr4 6885132 6885386 -177403276 + (TGAG)n Simple_repeat Simple_repeat 1 254 0 933 172 0 0 chr4 6885422 6885602 -177403060 + (TGAG)n Simple_repeat Simple_repeat 1 180 0 333 273 206 5 chr4 6885627 6885821 -177402841 + L2 LINE L2 2536 2768 -546 2187 128 0 6 chr4 6885833 6886146 -177402516 + AluSx SINE Alu 1 311 -1 201 291 96 8 chr4 6886152 6886340 -177402322 + MIR SINE MIR 16 260 -2 281 272 278 12 chr4 6886419 6886592 -177402070 + MIR SINE MIR 35 253 -9 1378 267 132 16 chr4 6886712 6887516 -177401146 + L2 LINE L2 2420 3288 -25 850 303 16 28 chr4 6887562 6887816 -177400846 + MIR SINE MIR 2 252 -10 309 293 98 62 chr4 6887940 6888165 -177400497 - L2 LINE L2 -115 3157 2925 303 140 0 0 chr4 6888241 6888291 -177400371 + (CA)n Simple_repeat Simple_repeat 2 51 0 455 341 96 47 chr4 6888464 6888892 -177399770 - L2 LINE L2 -1 3271 2823 1647 233 31 46 chr4 6888895 6889351 -177399311 - LTR16A LTR ERVL 0 450 2 348 359 84 20 chr4 6889383 6889634 -177399028 - L2 LINE L2 -502 2812 2546 355 230 58 0 chr4 6889737 6889824 -177398838 - MIR SINE MIR -122 140 49 302 138 17 0 chr4 6889908 6889966 -177398696 + (TTA)n Simple_repeat Simple_repeat 2 60 0 279 241 123 92 chr4 6890484 6890520 -177398142 + L1ME4a LINE L1 5795 5828 -293 2450 58 3 0 chr4 6890520 6890815 -177397847 + AluY SINE Alu 2 297 -14 279 241 123 92 chr4 6890815 6891094 -177397568 + L1ME4a LINE L1 5828 6120 -1 2735 235 81 36 chr4 6891909 6892679 -177395983 - L1ME2 LINE L1 -66 6098 5241 2449 61 0 3 chr4 6892679 6892976 -177395686 + AluY SINE Alu 1 296 -15 2735 235 81 36 chr4 6892976 6893380 -177395282 - L1ME2 LINE L1 -923 5241 4857 375 362 82 15 chr4 6893380 6893576 -177395086 - LTR16C LTR ERVL -197 294 86 370 237 65 47 chr4 6894028 6894260 -177394402 - L1ME LINE L1 -303 5818 5583 225 276 17 138 chr4 6895699 6895815 -177392847 - MIR SINE MIR -58 150 49 444 311 66 59 chr4 6896437 6896708 -177391954 + L2 LINE L2 2858 3134 -179 419 0 20 0 chr4 6896708 6896759 -177391903 + (TG)n Simple_repeat Simple_repeat 2 53 0 444 311 66 59 chr4 6896759 6896895 -177391767 + L2 LINE L2 3134 3268 -45 2848 249 142 11 chr4 6896956 6897936 -177390726 + L1MEc LINE L1 34 1141 -5255 2503 229 56 61 chr4 6897925 6898299 -177390363 + L1M4 LINE L1 3604 3978 -2168 * 3641 83 13 0 chr4 6898299 6898746 -177389916 - MLT2A2 LTR ERVL 0 453 1 2503 229 56 61 chr4 6898746 6899133 -177389529 + L1M4 LINE L1 3978 4376 -1770 2096 115 11 4 chr4 6899133 6899411 -177389251 - AluSg SINE Alu -30 280 1 2503 229 56 61 chr4 6899411 6899584 -177389078 + L1M4 LINE L1 4376 4548 -1598 * 9761 26 0 0 chr4 6899582 6900767 -177387895 - L1PA2 LINE L1 -1397 4749 3565 7964 14 1 0 chr4 6900767 6902179 -177386483 + L1PA2 LINE L1 4743 6155 0 1263 221 34 0 chr4 6902203 6902525 -177386137 + L1M4 LINE L1 4533 4865 -1281 237 173 19 192 chr4 6902526 6902600 -177386062 - L2 LINE L2 -93 3220 3167 6164 60 18 15 chr4 6902600 6903378 -177385284 + LTR17 LTR ERV1 1 780 0 237 173 19 192 chr4 6903378 6903407 -177385255 - L2 LINE L2 -146 3167 3135 2303 114 0 0 chr4 6904181 6904480 -177384182 + AluSx SINE Alu 1 299 -13 235 322 66 25 chr4 6904863 6904984 -177383678 - MER5A DNA MER1_type -1 188 63 772 69 0 0 chr4 6905174 6905276 -177383386 - L1MA1 LINE L1 0 6302 6201 2062 157 13 24 chr4 6906061 6906438 -177382224 + MLT1B LTR MaLR 1 373 -17 585 254 21 0 chr4 6907201 6907343 -177381319 + MER45A DNA AcHobo 34 178 0 256 349 66 0 chr4 6907356 6907462 -177381200 - MIR SINE MIR -71 191 79 390 273 60 40 chr4 6907589 6907739 -177380923 + L2 LINE L2 3160 3312 -1 357 298 142 0 chr4 6907793 6907934 -177380728 - MIR SINE MIR -55 207 47 672 244 5 86 chr4 6908327 6908390 -177380272 + MIR SINE MIR 26 93 -169 1923 193 11 67 chr4 6908390 6908825 -177379837 - MLT2D LTR ERVL 0 414 4 672 244 5 86 chr4 6908825 6908982 -177379680 + MIR SINE MIR 93 228 -34 524 267 36 27 chr4 6909304 6909518 -177379144 - MIR SINE MIR -13 249 34 447 254 260 21 chr4 6910343 6910822 -177377840 - L2 LINE L2 0 3313 2713 200 310 0 0 chr4 6910875 6910933 -177377729 - L2 LINE L2 -774 2540 2483 1304 277 260 15 chr4 6910950 6912037 -177376625 - L2 LINE L2 -1938 1376 23 295 243 0 23 chr4 6912345 6912607 -177376055 + C-rich Low_complexity Low_complexity 1 255 0 317 306 67 40 chr4 6912973 6913147 -177375515 + MIR3 SINE MIR 12 190 -18 364 341 12 49 chr4 6913193 6913357 -177375305 + MIR3 SINE MIR 37 194 -14 281 331 111 94 chr4 6913804 6914164 -177374498 - L2 LINE L2 -8 3264 2899 421 303 43 33 chr4 6914227 6914276 -177374386 + MIR SINE MIR 20 67 -177 2335 100 6 3 chr4 6914276 6914587 -177374075 - AluSq SINE Alu -1 312 1 421 303 43 33 chr4 6914587 6914725 -177373937 + MIR SINE MIR 67 207 -37 228 244 309 24 chr4 6914868 6914991 -177373671 - MIR SINE MIR -5 257 100 301 255 29 29 chr4 6915563 6915665 -177372997 + L3b LINE CR1 1279 1380 -203 1871 198 7 44 chr4 6915831 6916236 -177372426 - MLT1B LTR MaLR 0 390 1 1490 250 70 2 chr4 6916252 6916708 -177371954 + MLT1D LTR MaLR 1 487 -18 277 282 12 12 chr4 6916721 6916806 -177371856 + MIR SINE MIR 162 246 -16 1076 243 36 30 chr4 6917246 6917498 -177371164 - MLT1C LTR MaLR -29 438 182 2228 109 23 7 chr4 6917498 6917802 -177370860 - AluY SINE Alu -2 309 1 1076 243 36 30 chr4 6917802 6917878 -177370784 - MLT1C LTR MaLR -285 182 108 269 143 175 0 chr4 6917965 6918028 -177370634 - MLT1C LTR MaLR -368 99 26 195 310 0 0 chr4 6918534 6918592 -177370070 - L2 LINE L2 -563 2751 2694 2033 125 32 0 chr4 6918701 6918980 -177369682 + AluSx SINE Alu 7 294 -18 240 261 144 27 chr4 6919205 6919316 -177369346 + MIR SINE MIR 105 228 -34 186 370 0 0 chr4 6919335 6919408 -177369254 + MIR SINE MIR 188 260 -2 317 324 82 34 chr4 6919817 6919937 -177368725 - MIR SINE MIR -25 237 101 2680 115 51 5 chr4 6919937 6920346 -177368316 - MSTA LTR MaLR 0 428 1 317 324 82 34 chr4 6920346 6920432 -177368230 - MIR SINE MIR -161 101 21 378 265 121 8 chr4 6921237 6921369 -177367293 - MIR SINE MIR -39 223 77 1104 278 44 54 chr4 6921372 6921876 -177366786 - MLT1E LTR MaLR -3 590 92 314 299 124 17 chr4 6921948 6922182 -177366480 + L2 LINE L2 2990 3248 -65 1210 221 95 52 chr4 6922615 6923058 -177365604 - MLT1C LTR MaLR 0 467 6 218 311 68 14 chr4 6923903 6923977 -177364685 - L2 LINE L2 -28 3285 3208 793 212 13 87 chr4 6924093 6924324 -177364338 - MER58C DNA MER1_type -1 214 1 469 278 69 0 chr4 6925063 6925207 -177363455 + MIR SINE MIR 47 200 -62 486 153 57 57 chr4 6925305 6925438 -177363224 - MER5A DNA MER1_type -53 136 4 287 272 130 0 chr4 6925449 6925541 -177363121 - MER5A DNA MER1_type 0 189 86 219 331 50 2 chr4 6926165 6926303 -177362359 + MIR SINE MIR 33 175 -76 373 293 121 0 chr4 6927342 6927458 -177361204 - L2 LINE L2 -2 3270 3141 325 234 184 96 chr4 6928326 6928804 -177359858 - MLT1H LTR MaLR -17 532 13 192 221 256 12 chr4 6929053 6929139 -177359523 - L2 LINE L2 -21 3251 3145 339 277 184 28 chr4 6929144 6929285 -177359377 - MER5B DNA MER1_type -5 173 11 2266 188 65 32 chr4 6929596 6930134 -177358528 + MER74A LTR ERVL 3 558 0 1376 196 110 6 chr4 6930668 6930985 -177357677 - MLT1C LTR MaLR -8 459 110 479 186 102 51 chr4 6931266 6931384 -177357278 - MLT1C LTR MaLR -343 124 1 2133 102 7 0 chr4 6931406 6931680 -177356982 - AluY SINE Alu -9 302 27 2119 138 22 43 chr4 6931951 6932035 -177356627 + MLT1A1 LTR MaLR 1 85 -280 2014 149 155 13 chr4 6932035 6932410 -177356252 - MSTA LTR MaLR 0 428 1 9075 178 42 1 chr4 6932417 6934003 -177354659 - MSTA-int LTR MaLR 0 1651 1 1844 138 121 87 chr4 6934003 6934417 -177354245 - MSTA LTR MaLR 0 428 1 2119 138 22 43 chr4 6934417 6934694 -177353968 + MLT1A1 LTR MaLR 89 363 -2 2154 146 125 8 chr4 6934747 6935130 -177353532 + MSTA LTR MaLR 1 428 0 268 301 36 0 chr4 6935690 6935773 -177352889 - LTR67 LTR ERVL -366 191 106 701 206 153 53 chr4 6937353 6937581 -177351081 - MLT1A1 LTR MaLR -41 324 74 2442 88 0 0 chr4 6937581 6937877 -177350785 - AluY SINE Alu -15 296 1 240 211 175 0 chr4 6937897 6937954 -177350708 - MER2 DNA MER2_type -1 344 278 914 203 9 42 chr4 6938013 6938230 -177350432 - MER2 DNA MER2_type -135 210 1 233 128 106 0 chr4 6938240 6938287 -177350375 - MLT1A1 LTR MaLR -311 54 3 * 567 250 27 7 chr4 6938287 6938426 -177350236 + MLT1A2 LTR MaLR 233 374 0 282 248 199 71 chr4 6939334 6939684 -177348978 + L2 LINE L2 2624 3063 -250 * 458 257 18 0 chr4 6939683 6939796 -177348866 - MIR SINE MIR -75 187 73 308 286 142 24 chr4 6939800 6940063 -177348599 - MLT1K LTR MaLR 0 588 327 282 258 0 0 chr4 6940150 6940247 -177348415 + L1MC/D LINE L1 5156 5252 -894 422 247 140 88 chr4 6940335 6940699 -177347963 + L1MC/D LINE L1 5429 5811 -1997 319 161 16 16 chr4 6940699 6940761 -177347901 - MER46C DNA MER2_type -1 337 276 28 61 0 0 chr4 6940769 6940818 -177347844 + AT_rich Low_complexity Low_complexity 1 49 0 454 241 76 0 chr4 6940862 6941007 -177347655 - MER46C DNA MER2_type -97 241 86 904 259 19 42 chr4 6941723 6941986 -177346676 - MIR SINE MIR -2 260 4 280 272 39 10 chr4 6942712 6942815 -177345847 + CT-rich Low_complexity Low_complexity 5 110 0 196 362 46 11 chr4 6943537 6943711 -177344951 + L2 LINE L2 2827 3006 -266 540 335 61 48 chr4 6943758 6944268 -177344394 - L1MEd LINE L1 -997 1267 69 485 269 210 31 chr4 6944269 6944622 -177344040 - MLT1H LTR MaLR -7 542 127 492 232 54 152 chr4 6946461 6946737 -177341925 - MIR SINE MIR 0 262 14 324 331 8 0 chr4 6946769 6946902 -177341760 - MARNA DNA Mariner -43 543 410 2057 126 0 53 chr4 6947432 6947622 -177341040 - AluSq SINE Alu 0 310 142 2445 87 0 3 chr4 6947622 6947932 -177340730 - AluY SINE Alu -2 309 1 1371 156 0 0 chr4 6947932 6948067 -177340595 - AluSx SINE Alu -177 135 1 2057 126 0 53 chr4 6947932 6948067 -177340595 - AluSq SINE Alu -168 142 1 623 290 44 11 chr4 6948337 6948520 -177340142 - MIR SINE MIR -72 190 2 325 340 89 49 chr4 6949167 6949593 -177339069 - L2 LINE L2 -3 3269 2827 300 295 23 54 chr4 6949919 6950048 -177338614 + MIR SINE MIR 119 243 -19 243 321 74 0 chr4 6950110 6950191 -177338471 - L2 LINE L2 -50 3222 3136 7201 175 158 12 chr4 6950362 6951853 -177336809 + MER52A LTR ERV1 48 1755 0 243 234 138 21 chr4 6951895 6951989 -177336673 - MIR SINE MIR -138 124 20 234 0 0 0 chr4 6951999 6952025 -177336637 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 438 282 31 49 chr4 6952026 6952189 -177336473 - L2 LINE L2 -14 3299 3140 2631 231 92 27 chr4 6952196 6952965 -177335697 - L1ME1 LINE L1 -9 6952 6105 1902 138 57 7 chr4 6952965 6953262 -177335400 + AluSx SINE Alu 1 312 0 2631 231 92 27 chr4 6953262 6953411 -177335251 - L1ME1 LINE L1 -856 6105 5967 549 161 0 0 chr4 6953431 6953524 -177335138 - HY3 scRNA scRNA -5 96 4 4866 262 114 28 chr4 6953557 6954668 -177333994 - L1ME1 LINE L1 -2108 4833 3819 2367 107 0 3 chr4 6954668 6954978 -177333684 + AluY SINE Alu 1 309 -2 4866 262 114 28 chr4 6954978 6955482 -177333180 - L1ME1 LINE L1 -3122 3819 3360 924 229 19 19 chr4 6955482 6955692 -177332970 + MER63A DNA MER1_type 1 210 0 4866 262 114 28 chr4 6955692 6957615 -177331047 - L1ME1 LINE L1 -3581 3360 816 405 333 117 0 chr4 6957657 6957828 -177330834 - L2 LINE L2 -353 2961 2771 354 289 204 5 chr4 6958591 6958802 -177329860 - MIR SINE MIR 0 262 10 217 338 68 0 chr4 6958871 6958945 -177329717 - L2 LINE L2 -93 3179 3101 606 263 117 29 chr4 6959344 6959584 -177329078 - MIR SINE MIR 0 262 2 233 328 172 38 chr4 6959610 6959976 -177328686 - L2 LINE L2 -627 2687 2273 348 264 195 38 chr4 6960025 6960184 -177328478 + MIR3 SINE MIR 21 204 -4 311 269 8 76 chr4 6960933 6961052 -177327610 + L1MC4 LINE L1 6622 6732 -1310 428 274 132 56 chr4 6961128 6961325 -177327337 + MIR SINE MIR 48 259 -3 214 250 50 0 chr4 6961332 6961392 -177327270 + MIR SINE MIR 188 250 -12 260 366 27 9 chr4 6961465 6961577 -177327085 + MIR SINE MIR 24 137 -71 272 180 34 79 chr4 6962094 6962183 -177326479 + MIR SINE MIR 178 262 0 318 280 114 30 chr4 6962200 6962332 -177326330 - L2 LINE L2 0 3313 3171 197 336 50 17 chr4 6962464 6962583 -177326079 - L2 LINE L2 -209 3063 2941 257 262 94 60 chr4 6963282 6963431 -177325231 + MIR3 SINE MIR 33 186 -22 184 346 0 0 chr4 6963530 6963582 -177325080 - L2 LINE L2 -14 3258 3207 690 254 50 35 chr4 6963670 6963753 -177324909 + MIR SINE MIR 28 108 -154 1453 241 81 27 chr4 6963753 6964196 -177324466 - MLT1C LTR MaLR 0 467 1 690 254 50 35 chr4 6964196 6964313 -177324349 + MIR SINE MIR 108 231 -31 41271 36 22 1 chr4 6965144 6971171 -177317491 - L1PA2 LINE L1 0 6155 1 571 257 41 53 chr4 6971208 6971379 -177317283 - MIR SINE MIR 0 262 94 225 223 155 58 chr4 6971559 6971662 -177317000 + MIR SINE MIR 29 141 -67 1312 163 8 31 chr4 6972188 6972446 -177316216 - L1MB5 LINE L1 0 6174 5923 1973 133 33 0 chr4 6972826 6973126 -177315536 + AluSq SINE Alu 1 310 -3 349 336 29 14 chr4 6973491 6973631 -177315031 - MIR3 SINE MIR -49 159 18 1973 133 3 30 chr4 6973888 6974189 -177314473 + AluJb SINE Alu 1 293 -19 211 243 30 52 chr4 6974252 6974351 -177314311 + MIR SINE MIR 99 200 -8 184 287 176 0 chr4 6974505 6974613 -177314049 + L2 LINE L2 3146 3272 0 23 33 0 0 chr4 6975154 6975184 -177313478 + AT_rich Low_complexity Low_complexity 1 30 0 1997 122 3 14 chr4 6975602 6975896 -177312766 + AluSx SINE Alu 1 291 -21 3419 116 25 26 chr4 6976099 6976627 -177312035 + MER1A DNA MER1_type 1 527 0 442 327 7 20 chr4 6976944 6977094 -177311568 - L3 LINE CR1 -89 1488 1341 302 353 14 43 chr4 6977126 6977333 -177311329 + MIR SINE MIR 51 251 -11 445 250 74 23 chr4 6977492 6977668 -177310994 + MIR SINE MIR 49 233 -29 257 339 35 9 chr4 6977901 6978016 -177310646 - L2 LINE L2 -477 2837 2720 * 393 286 124 57 chr4 6978013 6978156 -177310506 + MIR SINE MIR 6 169 -93 1280 164 19 5 chr4 6978156 6978369 -177310293 - MER20 DNA MER1_type -3 216 1 393 286 124 57 chr4 6978369 6978435 -177310227 + MIR SINE MIR 169 229 -33 192 345 36 0 chr4 6979202 6979257 -177309405 + MIR3 SINE MIR 133 189 -19 195 42 0 0 chr4 6979764 6979788 -177308874 + (GA)n Simple_repeat Simple_repeat 2 25 0 269 233 0 0 chr4 6979975 6980035 -177308627 + MIR SINE MIR 88 147 -61 2188 122 0 3 chr4 6980164 6980459 -177308203 + AluSq SINE Alu 1 294 -19 203 288 34 0 chr4 6980628 6980687 -177307975 + L2 LINE L2 3136 3196 -76 1448 177 59 67 chr4 6980795 6981168 -177307494 - MLT1B LTR MaLR -20 370 1 239 299 0 0 chr4 6981241 6981308 -177307354 + MIR SINE MIR 115 181 -81 235 318 65 9 chr4 6982263 6982370 -177306292 - L2 LINE L2 -24 3248 3136 243 292 14 0 chr4 6983032 6983104 -177305558 + MIR SINE MIR 22 94 -168 2668 54 0 6 chr4 6983744 6984057 -177304605 - AluY SINE Alu 0 311 1 1984 102 11 25 chr4 6984128 6984411 -177304251 + AluSp SINE Alu 1 279 -34 575 129 0 10 chr4 6984429 6984530 -177304132 + (GGAA)n Simple_repeat Simple_repeat 1 100 0 792 207 40 6 chr4 6984576 6984750 -177303912 + MER5A DNA MER1_type 1 180 -9 479 311 21 31 chr4 6984936 6985129 -177303533 - MIR SINE MIR -70 192 2 926 127 0 182 chr4 6985187 6985423 -177303239 - 7SK RNA RNA 0 193 1 311 261 35 49 chr4 6985445 6985587 -177303075 + MER5B DNA MER1_type 1 140 -38 208 335 99 13 chr4 6985893 6986045 -177302617 - MIR3 SINE MIR -24 184 20 187 273 91 57 chr4 6986395 6986483 -177302179 + MIR SINE MIR 55 145 -63 469 320 120 27 chr4 6987155 6987526 -177301136 - L2 LINE L2 -223 3090 2685 618 242 3 0 chr4 6988608 6988961 -177299701 + (TG)n Simple_repeat Simple_repeat 1 354 0 780 217 49 0 chr4 6989227 6989411 -177299251 - MER20 DNA MER1_type -24 195 3 317 260 0 6 chr4 6990025 6990206 -177298456 + (CA)n Simple_repeat Simple_repeat 1 180 0 2067 183 46 0 chr4 6990434 6990828 -177297834 - MSTB LTR MaLR 0 426 15 435 343 157 0 chr4 6991143 6991353 -177297309 - MIR SINE MIR -1 261 19 201 74 0 0 chr4 6991402 6991429 -177297233 + (TGAA)n Simple_repeat Simple_repeat 4 30 0 412 244 193 10 chr4 6991744 6991941 -177296721 - MIR SINE MIR -10 252 20 341 294 87 38 chr4 6992108 6992347 -177296315 - MIR SINE MIR -12 250 1 419 297 143 6 chr4 6992381 6992556 -177296106 - MIR SINE MIR -7 255 57 348 255 20 29 chr4 6992856 6992958 -177295704 + L1ME4a LINE L1 5800 5900 -221 278 141 16 47 chr4 6993679 6993733 -177294929 + ORSL DNA AcHobo 1 54 -221 1365 247 70 20 chr4 6993733 6994178 -177294484 - MLT1C LTR MaLR 0 467 1 302 267 67 0 chr4 6994912 6994987 -177293675 + MIR SINE MIR 14 93 -169 2339 59 42 3 chr4 6995323 6995610 -177293052 + AluY SINE Alu 1 298 -13 237 321 130 41 chr4 6995816 6996062 -177292600 - L2 LINE L2 -90 3182 2915 2054 180 69 7 chr4 6997721 6998161 -177290501 + MLT1C LTR MaLR 1 467 0 234 324 59 20 chr4 6998173 6998275 -177290387 + MER5A DNA MER1_type 80 185 -4 279 345 18 0 chr4 6998464 6998574 -177290088 - LTR16C LTR ERVL -287 204 93 996 163 98 25 chr4 6999390 6999593 -177289069 - MER20 DNA MER1_type -1 218 1 198 286 209 9 chr4 6999724 6999829 -177288833 - L2 LINE L2 0 3313 3188 408 258 86 7 chr4 6999971 7000122 -177288540 - MIR SINE MIR -72 190 28 2318 104 3 0 chr4 7000375 7000674 -177287988 + AluSx SINE Alu 1 300 -12 241 289 59 17 chr4 7000819 7000951 -177287711 + MIR3 SINE MIR 25 161 -47 2375 79 0 16 chr4 7001682 7001986 -177286676 + AluSg SINE Alu 1 299 -11 1912 122 4 0 chr4 7001997 7002252 -177286410 + AluSx SINE Alu 39 294 -18 2356 80 6 26 chr4 7002429 7002742 -177285920 - AluSq SINE Alu -6 307 1 949 215 45 126 chr4 7003139 7003647 -177285015 + MLT1C LTR MaLR 1 467 0 640 293 90 24 chr4 7004090 7004424 -177284238 - MLT1I LTR MaLR -50 359 4 281 336 66 8 chr4 7005335 7005591 -177283071 - LTR33 LTR ERVL -241 280 10 2394 100 3 0 chr4 7005606 7005961 -177282701 - AluSx SINE Alu 0 356 1 416 300 53 87 chr4 7005974 7006274 -177282388 + L3 LINE CR1 1251 1540 -37 599 228 178 15 chr4 7006442 7006639 -177282023 + MIR SINE MIR 13 241 -21 2794 54 3 40 chr4 7006756 7007129 -177281533 - MER4E LTR ERV1 0 766 408 43870 47 1 1 chr4 7007129 7013247 -177275415 - L1PA4 LINE L1 -5 6150 30 1322 200 0 8 chr4 7013295 7013535 -177275127 - MER65C LTR ERV1 -41 420 183 377 118 0 0 chr4 7013541 7013592 -177275070 - MER65C LTR ERV1 -410 51 1 638 333 57 41 chr4 7013594 7014087 -177274575 - MER65C-int LTR ERV1 -2 4869 4369 1501 274 74 14 chr4 7014204 7014623 -177274039 - MER65C-int LTR ERV1 -779 4092 3649 1619 107 5 0 chr4 7014640 7014855 -177273807 + AluSg/x SINE Alu 82 297 -15 291 139 0 0 chr4 7014864 7014907 -177273755 + tRNA-Gln-CAG tRNA tRNA 1 43 -32 3326 197 60 77 chr4 7014908 7016142 -177272520 - MER65C-int LTR ERV1 -3125 3473 1037 699 137 0 0 chr4 7016144 7016284 -177272378 - AluSc SINE Alu 0 317 178 1240 197 45 74 chr4 7016285 7016654 -177272008 - MER65-int LTR ERV1 -2902 1969 1612 2307 98 7 0 chr4 7016654 7016949 -177271713 - AluSx SINE Alu -15 297 1 1240 197 45 74 chr4 7016949 7017000 -177271662 - MER65-int LTR ERV1 -3259 1612 1561 44458 40 6 2 chr4 7017120 7023241 -177265421 - L1PA3 LINE L1 -3 6152 7 521 257 43 53 chr4 7023248 7023435 -177265227 - MER34 LTR ERV1 -319 223 39 282 154 0 58 chr4 7023721 7023773 -177264889 - LTR57-int LTR ERVL -4992 351 303 305 307 57 17 chr4 7024504 7024680 -177263982 - MIR SINE MIR -26 236 54 402 301 7 15 chr4 7024977 7025113 -177263549 + L2 LINE L2 3136 3270 -2 215 277 208 10 chr4 7025229 7025330 -177263332 - MIR SINE MIR -109 153 33 496 231 52 15 chr4 7025734 7025868 -177262794 + MIR3 SINE MIR 17 155 -53 426 278 28 45 chr4 7026679 7026885 -177261777 + MIR SINE MIR 1 205 -57 25 0 0 0 chr4 7027191 7027216 -177261446 + AT_rich Low_complexity Low_complexity 1 25 0 746 212 7 0 chr4 7028728 7028874 -177259788 + MER58B DNA MER1_type 195 341 0 1958 140 164 32 chr4 7029108 7029451 -177259211 - MSTA LTR MaLR 0 428 28 2012 130 0 7 chr4 7029451 7029757 -177258905 + AluSx SINE Alu 1 304 0 1958 140 164 32 chr4 7029757 7029790 -177258872 - MSTA LTR MaLR -400 28 1 1761 199 70 3 chr4 7030479 7030821 -177257841 + MLT1A1 LTR MaLR 1 365 0 386 285 148 54 chr4 7031657 7032027 -177256635 - L2 LINE L2 -284 2988 2590 843 286 68 39 chr4 7032634 7032716 -177255946 - MLT1L LTR MaLR -14 601 523 1663 194 0 9 chr4 7032716 7033031 -177255631 + AluJo SINE Alu 1 312 0 843 286 68 39 chr4 7033031 7033434 -177255228 - MLT1L LTR MaLR -92 523 102 339 321 44 0 chr4 7033798 7033935 -177254727 - MIR SINE MIR -6 256 114 256 204 0 0 chr4 7034177 7034221 -177254441 + MLT1F1 LTR MaLR 82 125 -442 2636 219 14 10 chr4 7034221 7034811 -177253851 + L1MD3 LINE L1 7404 7995 0 411 273 64 52 chr4 7035165 7035432 -177253230 + HAL1 LINE L1 801 1070 -1437 312 203 29 94 chr4 7035407 7035545 -177253117 + L1MA4 LINE L1 6165 6293 -7 * 6637 180 19 20 chr4 7035624 7037513 -177251149 + L1PA16 LINE L1 3895 5779 -387 1952 169 0 0 chr4 7037513 7037820 -177250842 + AluSx SINE Alu 1 307 -5 6637 180 19 20 chr4 7037820 7038206 -177250456 + L1PA16 LINE L1 5779 6164 -2 573 316 33 9 chr4 7038261 7038473 -177250189 - MIR SINE MIR 0 262 46 2556 117 14 0 chr4 7038553 7038912 -177249750 - THE1B LTR MaLR 0 364 1 10126 111 60 2 chr4 7038912 7040406 -177248256 - THE1B-int LTR MaLR 0 1580 1 2408 135 6 6 chr4 7040406 7040770 -177247892 - THE1B LTR MaLR 0 364 1 557 251 35 18 chr4 7041098 7041269 -177247393 - MER69A DNA AcHobo -2 175 2 1456 206 102 75 chr4 7041561 7041843 -177246819 - MER34 LTR ERV1 -9 533 235 2571 53 0 31 chr4 7041843 7042164 -177246498 + AluY SINE Alu 1 311 0 1456 206 102 75 chr4 7042164 7042283 -177246379 - MER34 LTR ERV1 -307 235 121 8552 202 54 29 chr4 7042283 7042719 -177245943 - MER34-int LTR ERV1 -250 4686 4262 2126 122 11 63 chr4 7042719 7043081 -177245581 + MER61A LTR ERV1 1 343 0 8552 202 54 29 chr4 7043081 7044723 -177243939 - MER34-int LTR ERV1 -674 4262 2556 26369 39 9 0 chr4 7044723 7050517 -177238145 + L1PA4 LINE L1 2 5832 -323 749 54 0 0 chr4 7050552 7050645 -177238017 + L1PA4 LINE L1 6054 6146 -9 402 194 101 36 chr4 7050652 7050791 -177237871 - MER34-int LTR ERV1 -3558 1378 1231 294 281 52 44 chr4 7051110 7051245 -177237417 - MER34-int LTR ERV1 -6147 654 519 1342 186 129 73 chr4 7051258 7051706 -177236956 - MER66A LTR ERV1 0 601 100 2528 201 44 2 chr4 7052141 7052638 -177236024 - MER34 LTR ERV1 0 542 25 659 290 47 53 chr4 7052985 7053437 -177235225 + LTR16A1 LTR ERVL 4 452 -5 189 259 155 0 chr4 7053457 7053515 -177235147 - L2 LINE L2 -65 3207 3141 365 301 81 0 chr4 7054195 7054331 -177234331 - MIR SINE MIR -70 192 46 235 312 0 0 chr4 7054434 7054511 -177234151 + MIR SINE MIR 176 252 -10 243 250 0 0 chr4 7054526 7054610 -177234052 + (CTG)n Simple_repeat Simple_repeat 3 86 0 383 309 17 11 chr4 7054616 7054852 -177233810 + (TTG)n Simple_repeat Simple_repeat 1 237 0 381 276 19 12 chr4 7055158 7055481 -177233181 + (TTG)n Simple_repeat Simple_repeat 1 325 0 232 324 124 0 chr4 7056082 7056187 -177232475 + L2 LINE L2 3150 3267 -5 2206 104 20 0 chr4 7056358 7056655 -177232007 - AluSq SINE Alu -10 303 1 1227 188 38 15 chr4 7056963 7057224 -177231438 - L1MA9 LINE L1 -38 6274 6008 352 221 26 62 chr4 7057557 7057670 -177230992 - MIR SINE MIR -68 194 86 312 163 0 0 chr4 7057774 7057823 -177230839 - MLT2D LTR ERVL 0 414 366 1340 143 177 33 chr4 7057827 7057934 -177230728 + MER2 DNA MER2_type 3 93 -252 3525 125 9 24 chr4 7057934 7058469 -177230193 + MER1A DNA MER1_type 1 527 0 1340 143 177 33 chr4 7058469 7058661 -177230001 + MER2 DNA MER2_type 93 345 0 1652 203 72 6 chr4 7058661 7059010 -177229652 - MLT2D LTR ERVL -42 372 1 1125 249 76 15 chr4 7059534 7060107 -177228555 - L2 LINE L2 0 3313 2700 741 301 115 8 chr4 7060283 7060695 -177227967 - L2 LINE L2 -204 3109 2655 279 314 51 8 chr4 7060783 7060901 -177227761 + L2 LINE L2 3189 3311 -2 294 95 0 0 chr4 7060902 7060944 -177227718 + (TGGA)n Simple_repeat Simple_repeat 1 42 0 207 0 0 0 chr4 7061361 7061384 -177227278 + (A)n Simple_repeat Simple_repeat 1 23 0 495 306 39 69 chr4 7061636 7061996 -177226666 - LTR67 LTR ERVL -124 433 85 1020 129 14 37 chr4 7062004 7062140 -177226522 - MLT1A2 LTR MaLR -1 373 235 345 47 0 0 chr4 7062140 7062183 -177226479 + (GA)n Simple_repeat Simple_repeat 2 44 0 1020 129 14 37 chr4 7062183 7062365 -177226297 - MLT1A2 LTR MaLR -139 235 1 281 50 25 0 chr4 7062472 7062512 -177226150 + L2 LINE L2 3214 3254 -18 21 36 0 0 chr4 7062925 7062953 -177225709 + AT_rich Low_complexity Low_complexity 1 28 0 2541 65 0 0 chr4 7063045 7063339 -177225323 + AluY SINE Alu 1 294 -17 302 230 73 51 chr4 7063346 7063524 -177225138 + L1MC/D LINE L1 5258 5439 -2369 1853 244 54 9 chr4 7063540 7064304 -177224358 + L1ME1 LINE L1 60 897 -5499 2508 237 50 35 chr4 7064305 7066319 -177222343 + L1ME1 LINE L1 3028 5212 -1023 216 0 0 0 chr4 7066319 7066343 -177222319 + (CA)n Simple_repeat Simple_repeat 2 25 0 2508 237 50 35 chr4 7066343 7067376 -177221286 + L1ME1 LINE L1 5212 6228 -7 318 315 0 0 chr4 7067386 7067478 -177221184 + L1MC/D LINE L1 5427 5518 -2290 21 0 0 0 chr4 7067572 7067593 -177221069 + AT_rich Low_complexity Low_complexity 1 21 0 597 278 128 18 chr4 7067737 7068018 -177220644 - L2 LINE L2 -3 3310 2999 270 336 0 9 chr4 7068202 7068312 -177220350 + MIR SINE MIR 45 153 -55 375 257 83 0 chr4 7068321 7068430 -177220232 - L2 LINE L2 -3 3269 3152 952 201 67 48 chr4 7068433 7068702 -177219960 + MLT1A2 LTR MaLR 2 275 -99 1800 164 0 11 chr4 7068716 7069003 -177219659 + AluJb SINE Alu 5 288 -24 586 254 31 21 chr4 7069117 7069310 -177219352 + MIR SINE MIR 34 228 -34 189 107 0 0 chr4 7071726 7071754 -177216908 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 385 247 55 41 chr4 7071860 7072006 -177216656 + MIR SINE MIR 8 155 -107 251 229 41 82 chr4 7072155 7072277 -177216385 + MLT1J2 LTR MaLR 3 119 -331 6838 36 0 1 chr4 7072466 7073268 -177215394 + L1PA4 LINE L1 5352 6152 -3 7074 183 169 16 chr4 7073327 7074843 -177213819 + MER52A LTR ERV1 1 1749 -6 504 224 131 90 chr4 7074860 7075105 -177213557 + MLT1J LTR MaLR 257 511 0 471 219 31 25 chr4 7075298 7075458 -177213204 - L1ME4a LINE L1 -2 6119 5959 437 110 14 0 chr4 7075479 7075552 -177213110 + (TTCC)n Simple_repeat Simple_repeat 1 74 0 277 306 39 54 chr4 7075760 7076011 -177212651 - MIR SINE MIR -5 257 9 260 211 211 0 chr4 7076126 7076221 -177212441 - MIR SINE MIR -116 146 32 1967 126 99 15 chr4 7076337 7076671 -177211991 + THE1B LTR MaLR 3 364 0 12400 79 6 0 chr4 7076671 7078237 -177210425 + THE1B-int LTR MaLR 1 1575 -5 2339 99 51 26 chr4 7078243 7078595 -177210067 + THE1B LTR MaLR 4 364 0 699 285 52 38 chr4 7078597 7078966 -177209696 - HAL1 LINE L1 -100 2407 2034 397 219 31 0 chr4 7078963 7079059 -177209603 + L1MC5 LINE L1 7690 7788 -173 * 597 309 78 25 chr4 7079202 7079522 -177209140 + L1MEc LINE L1 208 544 -5852 2619 115 33 14 chr4 7079568 7079987 -177208675 - MSTA LTR MaLR -1 427 1 700 199 97 58 chr4 7080055 7080281 -177208381 + L1MB8 LINE L1 5944 6178 0 729 288 30 9 chr4 7080282 7080619 -177208043 + L1MEc LINE L1 673 1016 -5380 1454 272 67 54 chr4 7080648 7081262 -177207400 + L1MCb LINE L1 3 624 -5421 481 171 29 19 chr4 7081289 7081394 -177207268 - L1MC5 LINE L1 -173 7788 7683 * 623 265 65 33 chr4 7081382 7081560 -177207102 + HAL1 LINE L1 2034 2224 -283 234 0 0 0 chr4 7081560 7081586 -177207076 + (TG)n Simple_repeat Simple_repeat 2 27 0 623 265 65 33 chr4 7081586 7081652 -177207010 + HAL1 LINE L1 2224 2286 -221 8547 242 42 19 chr4 7081698 7082440 -177206222 + L1MCb LINE L1 2442 3166 -3398 2278 110 0 7 chr4 7082440 7082748 -177205914 + AluSg SINE Alu 1 306 -4 8547 242 42 19 chr4 7082748 7084828 -177203834 + L1MCb LINE L1 3166 5284 -1280 5881 157 34 81 chr4 7084827 7085453 -177203209 + L1MC3 LINE L1 5914 6443 -1342 * 1659 192 27 3 chr4 7085453 7085577 -177203085 + AluJb SINE Alu 1 121 -191 216 0 0 0 chr4 7085577 7085601 -177203061 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1659 192 27 3 chr4 7085601 7085773 -177202889 + AluJb SINE Alu 121 304 -8 5881 157 34 81 chr4 7085773 7086488 -177202174 + L1MC3 LINE L1 6443 7191 -594 1988 131 38 35 chr4 7086830 7087196 -177201466 - THE1C LTR MaLR -8 367 1 23 0 0 0 chr4 7087216 7087239 -177201423 + AT_rich Low_complexity Low_complexity 1 23 0 331 303 127 21 chr4 7087296 7087438 -177201224 - MIR SINE MIR -74 188 32 229 265 61 41 chr4 7087791 7087889 -177200773 - MIR SINE MIR -162 100 1 273 346 31 25 chr4 7088196 7088355 -177200307 + MIR SINE MIR 37 196 -66 352 288 11 34 chr4 7088677 7088810 -177199852 + MIR SINE MIR 16 150 -58 575 225 46 101 chr4 7089837 7089892 -177198770 - MER63A DNA MER1_type -1478 210 154 2022 131 17 3 chr4 7089892 7090182 -177198480 - AluSc SINE Alu -15 294 1 575 225 46 101 chr4 7090182 7090344 -177198318 - MER63A DNA MER1_type -1534 154 5 298 206 0 29 chr4 7090803 7090871 -177197791 - L3 LINE CR1 -533 1044 979 32831 39 7 1 chr4 7091619 7096352 -177192310 + L1PA4 LINE L1 1388 6150 -5 832 70 9 0 chr4 7096352 7096466 -177192196 + MER4E LTR ERV1 408 522 -244 254 295 51 0 chr4 7296471 7296549 -176992113 + MIR SINE MIR 173 254 -8 867 246 188 56 chr4 7297632 7298256 -176990406 + L2 LINE L2 2573 3313 0 317 308 11 11 chr4 7298295 7298386 -176990276 + MIR3 SINE MIR 8 98 -110 208 349 0 0 chr4 7298570 7298633 -176990029 + (ATG)n Simple_repeat Simple_repeat 2 64 0 817 157 29 34 chr4 7298636 7298834 -176989828 + MER6 DNA MER2_type -65 865 0 466 163 24 91 chr4 7298869 7299045 -176989617 - MIR SINE MIR 0 262 101 526 162 0 20 chr4 7299253 7299352 -176989310 - MER3 DNA MER1_type -104 105 9 609 308 59 26 chr4 7299408 7299713 -176988949 - L2 LINE L2 -3 3310 2996 1150 286 175 25 chr4 7299716 7300432 -176988230 - L2 LINE L2 -506 2808 1986 1802 207 35 72 chr4 7300444 7300960 -176987702 + MLT1D LTR MaLR 3 499 -6 211 250 86 35 chr4 7300972 7301088 -176987574 - L2 LINE L2 -1340 1974 1853 243 247 214 11 chr4 7301368 7301457 -176987205 + L2 LINE L2 3166 3272 0 605 176 0 17 chr4 7301582 7301701 -176986961 - L1MC2 LINE L1 -9 6335 6219 2113 120 3 0 chr4 7301701 7302010 -176986652 - AluSx SINE Alu -2 310 1 1069 145 0 79 chr4 7302028 7302255 -176986407 - AluJo SINE Alu -12 300 92 1243 170 17 4 chr4 7302255 7302515 -176986147 - L1M3 LINE L1 -353 5818 5549 416 298 76 8 chr4 7303412 7303543 -176985119 - MIR3 SINE MIR -64 144 5 221 197 45 76 chr4 7303577 7303643 -176985019 - MIR SINE MIR -105 103 40 2281 76 0 20 chr4 7303819 7304123 -176984539 + AluY SINE Alu 1 298 -13 1596 205 58 54 chr4 7304559 7305062 -176983600 - MLT1D LTR MaLR 0 505 1 515 303 113 42 chr4 7305065 7305471 -176983191 - MLT1K LTR MaLR -28 560 126 327 296 30 54 chr4 7306207 7306408 -176982254 - MIR SINE MIR -47 215 21 2220 93 3 7 chr4 7306492 7306802 -176981860 - AluSc SINE Alu 0 309 1 373 299 36 7 chr4 7306919 7307056 -176981606 - MIR SINE MIR -81 181 41 722 286 15 0 chr4 7307854 7308050 -176980612 - MIR SINE MIR 0 262 64 1274 232 141 20 chr4 7308190 7308638 -176980024 - MLT1D LTR MaLR -2 503 1 196 239 0 0 chr4 7308662 7308708 -176979954 - L3 LINE CR1 -126 1451 1406 2822 9 0 0 chr4 7308967 7309282 -176979380 - AluYb8 SINE Alu -2 316 2 467 232 72 16 chr4 7309345 7309470 -176979192 + MIR SINE MIR 20 151 -111 833 165 0 0 chr4 7309541 7309674 -176978988 + FLAM_C SINE Alu 1 133 0 2899 194 14 45 chr4 7310982 7311602 -176977060 - MER77 LTR ERV1 0 605 5 299 242 23 117 chr4 7311645 7311909 -176976753 - L1MC4a LINE L1 -1777 6031 5793 226 241 19 0 chr4 7312785 7312839 -176975823 - MIR SINE MIR -32 230 176 246 216 91 0 chr4 7312985 7313073 -176975589 - L1MC4 LINE L1 0 8042 7947 401 271 26 58 chr4 7313383 7313538 -176975124 - MIR SINE MIR -105 157 8 376 230 11 0 chr4 7313571 7313658 -176975004 - MER117 DNA MER1_type -40 157 70 207 290 54 32 chr4 7313858 7313951 -176974711 + MIR SINE MIR 21 115 -147 185 350 41 0 chr4 7314425 7314522 -176974140 + MIR SINE MIR 110 210 -52 2013 120 0 0 chr4 7314582 7314894 -176973768 - AluSq SINE Alu 0 312 1 238 315 48 48 chr4 7315244 7315390 -176973272 + MIR SINE MIR 76 221 -41 718 177 0 0 chr4 7315523 7315647 -176973015 + FLAM_A SINE Alu 12 135 -7 330 26 0 0 chr4 7315744 7315783 -176972879 + (TG)n Simple_repeat Simple_repeat 2 40 0 309 266 13 25 chr4 7315786 7315865 -176972797 + L1MC4 LINE L1 6648 6725 -1317 482 279 95 54 chr4 7316527 7316842 -176971820 + HAL1 LINE L1 549 876 -1631 887 259 112 61 chr4 7316880 7317582 -176971080 + HAL1 LINE L1 961 1985 -522 1389 171 16 68 chr4 7317582 7317903 -176970759 + AluJo SINE Alu 1 304 -8 887 259 112 61 chr4 7317903 7318099 -176970563 + HAL1 LINE L1 1985 2169 -338 372 271 53 13 chr4 7318167 7318318 -176970344 + HAL1 LINE L1 2018 2174 -333 3022 110 43 0 chr4 7318908 7319172 -176969490 - L1P4 LINE L1 -412 5756 5464 1985 114 3 20 chr4 7319172 7319478 -176969184 - AluSq SINE Alu -12 301 1 3022 110 43 0 chr4 7319478 7319659 -176969003 - L1P4 LINE L1 -704 5464 5292 433 221 73 7 chr4 7319702 7319838 -176968824 - L1MC5 LINE L1 -753 7208 7064 1609 103 22 0 chr4 7320889 7321121 -176967541 + L1PA13 LINE L1 5927 6163 0 2642 158 16 5 chr4 7321257 7321739 -176966923 + L1MA4 LINE L1 5546 6045 -123 1911 79 0 0 chr4 7321776 7322016 -176966646 + AluSc SINE Alu 1 240 -69 320 287 11 0 chr4 7323214 7323301 -176965361 + MIR SINE MIR 86 173 -89 581 213 0 28 chr4 7323308 7323449 -176965213 - L1MA10 LINE L1 0 6334 6198 387 186 17 169 chr4 7323461 7323587 -176965075 - L1ME1 LINE L1 -174 5992 5895 2068 114 0 0 chr4 7323587 7323890 -176964772 - AluSx SINE Alu 0 303 1 387 186 17 169 chr4 7323890 7323933 -176964729 - L1ME1 LINE L1 -271 5895 5847 2049 247 144 25 chr4 7324050 7324861 -176963801 - HAL1 LINE L1 -1478 1029 122 419 194 43 21 chr4 7325180 7325273 -176963389 - MIR SINE MIR -100 162 68 3040 120 12 58 chr4 7325679 7326354 -176962308 - L1PA3 LINE L1 -3 6152 5509 2083 104 20 0 chr4 7326796 7327093 -176961569 - AluSq SINE Alu -10 303 1 1228 188 38 15 chr4 7327401 7327662 -176961000 - L1MA9 LINE L1 -38 6274 6008 406 221 26 62 chr4 7327995 7328108 -176960554 - MIR SINE MIR -68 194 86 313 163 0 0 chr4 7328212 7328261 -176960401 - MLT2D LTR ERVL 0 414 366 534 128 284 9 chr4 7328265 7328372 -176960290 + MER2 DNA MER2_type 3 139 -206 3221 106 7 28 chr4 7328372 7328833 -176959829 + MER1A DNA MER1_type 1 451 -78 1119 219 192 39 chr4 7329707 7330032 -176958630 + MLT1D LTR MaLR 1 411 -94 1035 206 0 0 chr4 7330032 7330255 -176958407 - L1MA4 LINE L1 -1 6299 6077 1119 219 192 39 chr4 7330255 7330367 -176958295 + MLT1D LTR MaLR 411 505 0 232 296 122 9 chr4 7330526 7330641 -176958021 + MIR SINE MIR 120 247 -15 243 269 0 0 chr4 7331341 7331393 -176957269 + MIR SINE MIR 209 260 -2 320 381 28 23 chr4 7332399 7332575 -176956087 + MIR SINE MIR 10 186 -76 243 0 0 0 chr4 7332615 7332642 -176956020 + (TA)n Simple_repeat Simple_repeat 1 27 0 * 306 0 0 0 chr4 7332641 7332675 -176955987 + (GA)n Simple_repeat Simple_repeat 2 35 0 748 215 48 27 chr4 7332676 7332862 -176955800 - MIR SINE MIR -72 190 1 204 244 22 0 chr4 7332881 7332926 -176955736 + L2 LINE L2 3210 3255 -17 532 237 14 3 chr4 7333027 7333386 -176955276 + (TGGA)n Simple_repeat Simple_repeat 1 363 0 544 237 23 62 chr4 7333712 7333969 -176954693 + Charlie3 DNA MER1_type 2458 2704 -6 414 115 33 0 chr4 7334105 7334166 -176954496 + MER2 DNA MER2_type 283 345 0 1667 203 72 6 chr4 7334166 7334515 -176954147 - MLT2D LTR ERVL -42 372 1 1301 249 76 15 chr4 7335039 7335612 -176953050 - L2 LINE L2 0 3313 2700 846 298 112 8 chr4 7335788 7336200 -176952462 - L2 LINE L2 -204 3109 2655 331 314 51 8 chr4 7336289 7336407 -176952255 + L2 LINE L2 3189 3311 -2 294 95 0 0 chr4 7336408 7336450 -176952212 + (TGGA)n Simple_repeat Simple_repeat 1 42 0 207 0 0 0 chr4 7336867 7336890 -176951772 + (A)n Simple_repeat Simple_repeat 1 23 0 517 306 39 69 chr4 7337142 7337502 -176951160 - LTR67 LTR ERVL -124 433 85 1027 129 14 37 chr4 7337510 7337646 -176951016 - MLT1A2 LTR MaLR -1 373 235 345 47 0 0 chr4 7337646 7337689 -176950973 + (GA)n Simple_repeat Simple_repeat 2 44 0 1027 129 14 37 chr4 7337689 7337871 -176950791 - MLT1A2 LTR MaLR -139 235 1 306 100 183 0 chr4 7337958 7338018 -176950644 + L2 LINE L2 3184 3254 -18 21 36 0 0 chr4 7338431 7338459 -176950203 + AT_rich Low_complexity Low_complexity 1 28 0 2418 61 0 0 chr4 7338551 7338845 -176949817 + AluY SINE Alu 1 294 -17 294 230 73 51 chr4 7338852 7339030 -176949632 + L1MC/D LINE L1 5258 5439 -2369 1901 246 50 19 chr4 7339046 7339811 -176948851 + L1ME1 LINE L1 60 897 -5499 2512 239 49 34 chr4 7339812 7341826 -176946836 + L1ME1 LINE L1 3028 5212 -1023 216 0 0 0 chr4 7341826 7341850 -176946812 + (CA)n Simple_repeat Simple_repeat 2 25 0 2512 239 49 34 chr4 7341850 7342883 -176945779 + L1ME1 LINE L1 5212 6228 -7 326 315 0 0 chr4 7342893 7342985 -176945677 + L1MC/D LINE L1 5427 5518 -2290 21 0 0 0 chr4 7343078 7343099 -176945563 + AT_rich Low_complexity Low_complexity 1 21 0 1112 226 33 7 chr4 7344474 7344646 -176944016 - L1MEc LINE L1 -4236 2160 1975 4154 93 35 10 chr4 7344646 7345237 -176943425 + MER4B LTR ERV1 5 610 0 1112 226 33 7 chr4 7345237 7345370 -176943292 - L1MEc LINE L1 -4421 1975 1847 1779 165 71 19 chr4 7345376 7345740 -176942922 - L1MB5 LINE L1 -8 6166 5784 1748 184 127 29 chr4 7345837 7346255 -176942407 - LTR2B LTR ERV1 0 490 32 4159 271 70 30 chr4 7346273 7347085 -176941577 - L1MEc LINE L1 -4631 1765 987 883 86 78 0 chr4 7347085 7347213 -176941449 + MER85 DNA T2_type 1 138 -1 4159 271 70 30 chr4 7347213 7348063 -176940599 - L1MEc LINE L1 -5409 987 36 437 184 31 20 chr4 7348063 7348161 -176940501 + MIR SINE MIR 162 260 -2 2879 149 7 2 chr4 7348586 7349023 -176939639 + MER72 LTR ERV1 6 444 -278 2236 114 64 9 chr4 7349023 7349366 -176939296 - THE1C LTR MaLR 0 375 14 2020 135 0 0 chr4 7349360 7349648 -176939014 + MER72 LTR ERV1 435 722 0 * 4154 175 17 11 chr4 7350684 7351122 -176937540 + MER50 LTR ERV1 1 446 -288 2498 92 53 8 chr4 7351122 7351481 -176937181 + THE1C LTR MaLR 1 375 0 4154 175 17 11 chr4 7351481 7351749 -176936913 + MER50 LTR ERV1 446 711 -23 44615 40 2 2 chr4 7351840 7357727 -176930935 + L1PA3 LINE L1 1 5887 -268 730 271 128 18 chr4 7357970 7358251 -176930411 - L2 LINE L2 -3 3310 2999 309 336 0 9 chr4 7358435 7358545 -176930117 + MIR SINE MIR 45 153 -55 420 257 83 0 chr4 7358554 7358663 -176929999 - L2 LINE L2 -3 3269 3152 962 201 67 48 chr4 7358666 7358935 -176929727 + MLT1A2 LTR MaLR 2 275 -99 1689 164 0 11 chr4 7358949 7359236 -176929426 + AluJb SINE Alu 5 288 -24 675 275 29 24 chr4 7359336 7359543 -176929119 + MIR SINE MIR 21 228 -34 202 308 169 6 chr4 7361680 7361852 -176926810 + L2 LINE L2 2854 3053 -219 189 107 0 0 chr4 7361959 7361987 -176926675 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 181 219 0 0 chr4 7361988 7362020 -176926642 - L2 LINE L2 -12 3260 3229 430 238 54 48 chr4 7362093 7362240 -176926422 + MIR SINE MIR 8 155 -107 236 226 30 52 chr4 7362390 7362511 -176926151 + MLT1J LTR MaLR 4 157 -331 6756 41 0 1 chr4 7362700 7363502 -176925160 + L1PA4 LINE L1 5352 6152 -3 7221 184 169 16 chr4 7363561 7365077 -176923585 + MER52A LTR ERV1 1 1749 -6 505 224 131 90 chr4 7365094 7365339 -176923323 + MLT1J LTR MaLR 257 511 0 464 219 31 25 chr4 7365532 7365692 -176922970 - L1ME4a LINE L1 -2 6119 5959 314 123 18 0 chr4 7365713 7365770 -176922892 + CT-rich Low_complexity Low_complexity 1 58 0 369 294 69 50 chr4 7365978 7366228 -176922434 - MIR SINE MIR -5 257 2 333 314 147 5 chr4 7366248 7366439 -176922223 - MIR SINE MIR -13 249 32 1987 123 99 15 chr4 7366555 7366889 -176921773 + THE1B LTR MaLR 3 364 0 12449 79 6 0 chr4 7366889 7368455 -176920207 + THE1B-int LTR MaLR 1 1575 -5 2342 99 51 26 chr4 7368461 7368813 -176919849 + THE1B LTR MaLR 4 364 0 665 287 54 41 chr4 7368815 7369184 -176919478 - HAL1 LINE L1 -100 2407 2034 392 219 31 0 chr4 7369181 7369277 -176919385 + L1MC5 LINE L1 7690 7788 -173 * 613 297 81 28 chr4 7369420 7369740 -176918922 + L1MEc LINE L1 208 544 -5852 2615 117 33 14 chr4 7369786 7370205 -176918457 - MSTA LTR MaLR -1 427 1 690 199 97 58 chr4 7370273 7370499 -176918163 + L1MB8 LINE L1 5944 6178 0 732 288 30 9 chr4 7370500 7370837 -176917825 + L1MEc LINE L1 673 1016 -5380 1476 272 67 54 chr4 7370866 7371480 -176917182 + L1MCb LINE L1 3 624 -5421 478 171 29 19 chr4 7371507 7371612 -176917050 - L1MC5 LINE L1 -173 7788 7683 * 577 262 65 44 chr4 7371600 7371778 -176916884 + HAL1 LINE L1 2034 2220 -287 234 0 0 0 chr4 7371778 7371804 -176916858 + (TG)n Simple_repeat Simple_repeat 2 27 0 577 262 65 44 chr4 7371804 7371873 -176916789 + HAL1 LINE L1 2220 2286 -221 6195 246 49 15 chr4 7371919 7372661 -176916001 + L1MCb LINE L1 2442 3157 -3407 2120 116 0 7 chr4 7372661 7372971 -176915691 + AluSg SINE Alu 1 308 -2 6195 246 49 15 chr4 7372971 7374403 -176914259 + L1MCb LINE L1 3157 4647 -1917 580 324 5 0 chr4 7374507 7374692 -176913970 - MIR SINE MIR -38 224 39 2167 103 7 0 chr4 7374956 7375258 -176913404 - AluSq SINE Alu -9 304 1 196 296 122 61 chr4 7375442 7375736 -176912926 - L2 LINE L2 -46 3226 2915 331 311 49 44 chr4 7375754 7375937 -176912725 - L2 LINE L2 -508 2806 2623 2436 162 76 8 chr4 7376069 7376556 -176912106 + L1MB5 LINE L1 5592 6111 -63 316 268 173 36 chr4 7377182 7377350 -176911312 + L1ME4a LINE L1 5853 6043 -78 206 341 22 52 chr4 7377511 7377646 -176911016 - MIR3 SINE MIR -40 168 38 339 175 16 16 chr4 7377840 7377903 -176910759 + MIR3 SINE MIR 133 195 -13 188 341 141 22 chr4 7378237 7378372 -176910290 - L2 LINE L2 -598 2716 2566 306 269 121 0 chr4 7378881 7379022 -176909640 - L1M4 LINE L1 -1301 4845 4688 2155 107 3 0 chr4 7379116 7379415 -176909247 + AluSq SINE Alu 3 302 -11 898 251 31 4 chr4 7380555 7380782 -176907880 - MIR SINE MIR -1 261 29 260 314 101 0 chr4 7380854 7381013 -176907649 + MER91A DNA MER1_type 22 196 0 407 215 13 0 chr4 7381398 7381477 -176907185 + MIR SINE MIR 2 81 -181 2795 187 19 0 chr4 7381479 7381965 -176906697 + MER68 LTR ERV1 3 497 -65 * 4067 117 23 143 chr4 7381960 7382220 -176906442 - Tigger3b DNA MER2_type -1797 1232 943 2034 108 17 0 chr4 7382220 7382507 -176906155 + AluSx SINE Alu 21 312 0 4067 117 23 143 chr4 7382507 7382688 -176905974 - Tigger3b DNA MER2_type -2086 943 742 1857 150 3 10 chr4 7382688 7382988 -176905674 - AluSx SINE Alu -14 298 1 4067 117 23 143 chr4 7382988 7383067 -176905595 - Tigger3b DNA MER2_type -2287 742 655 204 40 0 0 chr4 7383067 7383092 -176905570 + (TTTTA)n Simple_repeat Simple_repeat 1 25 0 4067 117 23 143 chr4 7383092 7383976 -176904686 - Tigger3b DNA MER2_type -2374 655 1 392 116 29 14 chr4 7383976 7384045 -176904617 + MER68 LTR ERV1 491 560 -2 562 276 61 33 chr4 7384047 7384228 -176904434 + MIR SINE MIR 77 262 0 784 243 70 27 chr4 7385343 7385599 -176903063 + MIR SINE MIR 3 259 -3 200 244 0 23 chr4 7385610 7385658 -176903004 + (TAG)n Simple_repeat Simple_repeat 3 50 -36 2210 109 3 0 chr4 7385658 7385969 -176902693 + AluSq SINE Alu 1 312 -1 200 244 0 23 chr4 7385969 7386006 -176902656 + (TAG)n Simple_repeat Simple_repeat 50 86 0 2283 96 0 0 chr4 7386026 7386328 -176902334 + AluSq SINE Alu 1 302 -11 556 244 8 8 chr4 7386923 7387046 -176901616 - L2 LINE L2 -8 3305 3183 216 0 0 0 chr4 7387744 7387768 -176900894 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 186 254 34 17 chr4 7387859 7387918 -176900744 + MIR SINE MIR 81 140 -68 1673 182 65 11 chr4 7388125 7388493 -176900169 + MLT1B LTR MaLR 1 388 -2 293 302 59 27 chr4 7388495 7388697 -176899965 - MIR SINE MIR 0 262 12 33 25 0 0 chr4 7389689 7389729 -176898933 + AT_rich Low_complexity Low_complexity 1 40 0 516 323 114 24 chr4 7390146 7390480 -176898182 - L3 LINE CR1 -17 1560 1197 367 322 128 0 chr4 7390492 7390719 -176897943 - L2 LINE L2 -509 2805 2550 524 189 28 9 chr4 7390930 7391036 -176897626 - MLT1C LTR MaLR -7 460 353 262 273 55 55 chr4 7391238 7391348 -176897314 - MER5A DNA MER1_type 0 189 80 1862 186 83 34 chr4 7391351 7391796 -176896866 - MLT1C LTR MaLR 0 467 1 344 403 14 0 chr4 7391820 7391959 -176896703 + L3 LINE CR1 1436 1576 -1 272 91 23 0 chr4 7392070 7392114 -176896548 + L1MC3 LINE L1 7550 7594 -191 926 155 83 6 chr4 7392115 7392296 -176896366 + L1MC2 LINE L1 6138 6332 -12 2318 72 0 0 chr4 7392424 7392716 -176895946 + AluSx SINE Alu 1 292 -20 354 98 0 0 chr4 7394248 7394299 -176894363 + (GGGA)n Simple_repeat Simple_repeat 4 54 0 188 283 0 0 chr4 7394432 7394478 -176894184 - L2 LINE L2 -8 3264 3219 194 283 0 0 chr4 7394654 7394700 -176893962 + MIR SINE MIR 30 75 -133 180 263 30 50 chr4 7394774 7394873 -176893789 + L2 LINE L2 920 1016 -2298 1523 221 85 32 chr4 7394895 7395356 -176893306 + MLT1D LTR MaLR 21 505 0 223 213 147 13 chr4 7395469 7395544 -176893118 - MIR SINE MIR -173 89 5 310 302 223 0 chr4 7395629 7395894 -176892768 + L2 LINE L2 1228 1551 -1763 379 274 18 97 chr4 7396107 7396333 -176892329 - L2 LINE L2 -28 3285 3078 189 345 0 0 chr4 7396673 7396731 -176891931 + L2 LINE L2 3215 3272 0 198 333 109 14 chr4 7396802 7396940 -176891722 + MIR SINE MIR 88 238 -24 291 270 92 50 chr4 7397213 7397353 -176891309 + MIR3 SINE MIR 71 237 -25 185 259 0 69 chr4 7397931 7397989 -176890673 + L2 LINE L2 3249 3302 -11 197 235 12 99 chr4 7399243 7399324 -176889338 - MIR SINE MIR -116 146 73 * 254 343 20 0 chr4 7399323 7399422 -176889240 + MIR SINE MIR 52 152 -110 893 243 53 0 chr4 7400251 7400457 -176888205 + MIR SINE MIR 13 229 -33 234 303 66 53 chr4 7400544 7400772 -176887890 + L2 LINE L2 2806 3036 -236 803 111 0 22 chr4 7400773 7400908 -176887754 + L1PA13 LINE L1 6031 6162 -1 287 29 29 105 chr4 7400961 7401066 -176887596 + (TATAA)n Simple_repeat Simple_repeat 3 99 0 324 114 53 35 chr4 7401069 7401236 -176887426 + (TTATA)n Simple_repeat Simple_repeat 1 169 0 368 270 48 100 chr4 7401236 7401466 -176887196 + L2 LINE L2 3015 3232 -40 228 275 46 69 chr4 7401867 7401998 -176886664 + MIR SINE MIR 85 212 -50 2264 102 0 0 chr4 7402135 7402439 -176886223 + AluSx SINE Alu 5 308 -4 230 182 36 18 chr4 7402440 7402495 -176886167 - MIR3 SINE MIR -13 195 140 526 295 87 12 chr4 7402552 7402725 -176885937 - MIR SINE MIR -4 258 73 432 192 79 68 chr4 7403206 7403383 -176885279 + LTR16C LTR ERVL 298 476 -15 214 230 92 7 chr4 7403383 7403535 -176885127 + (GTGTG)n Simple_repeat Simple_repeat 3 167 0 292 319 104 25 chr4 7403607 7403657 -176885005 + MER5B DNA MER1_type 1 46 -132 870 238 6 0 chr4 7403657 7403829 -176884833 + FAM SINE Alu 2 174 -1 292 319 104 25 chr4 7403829 7403941 -176884721 + MER5B DNA MER1_type 46 176 -2 253 314 41 0 chr4 7404213 7404334 -176884328 + MIR3 SINE MIR 7 132 -76 234 188 0 0 chr4 7404699 7404747 -176883915 - HAL1b LINE L1 -556 792 745 460 317 108 34 chr4 7405093 7405566 -176883096 - HAL1 LINE L1 -590 1917 1410 486 286 181 26 chr4 7405578 7405844 -176882818 + L1ME4a LINE L1 5813 6119 -2 210 158 0 0 chr4 7405846 7405884 -176882778 + (TTA)n Simple_repeat Simple_repeat 3 40 0 295 235 81 59 chr4 7405927 7406063 -176882599 + LTR16A LTR ERVL 282 420 -30 * 2732 176 35 6 chr4 7406043 7406526 -176882136 - MER68 LTR ERV1 -65 497 1 1739 201 50 42 chr4 7407313 7407771 -176880891 + MLT1C LTR MaLR 6 467 0 281 355 83 0 chr4 7407773 7407894 -176880768 - MIR SINE MIR -54 208 78 2242 219 38 20 chr4 7408798 7409411 -176879251 + L1M4 LINE L1 4243 4866 -1280 * 5862 157 34 81 chr4 7409410 7410036 -176878626 + L1MC3 LINE L1 5914 6443 -1342 1543 192 27 3 chr4 7410036 7410160 -176878502 + AluJb SINE Alu 1 121 -191 216 0 0 0 chr4 7410160 7410184 -176878478 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1543 192 27 3 chr4 7410184 7410356 -176878306 + AluJb SINE Alu 121 304 -8 5862 157 34 81 chr4 7410356 7411071 -176877591 + L1MC3 LINE L1 6443 7191 -594 1998 131 38 35 chr4 7411413 7411779 -176876883 - THE1C LTR MaLR -8 367 1 23 0 0 0 chr4 7411799 7411822 -176876840 + AT_rich Low_complexity Low_complexity 1 23 0 395 296 127 21 chr4 7411879 7412021 -176876641 - MIR SINE MIR -74 188 32 267 265 61 41 chr4 7412374 7412472 -176876190 - MIR SINE MIR -162 100 1 332 346 31 25 chr4 7412779 7412938 -176875724 + MIR SINE MIR 37 196 -66 391 288 11 34 chr4 7413260 7413393 -176875269 + MIR SINE MIR 16 150 -58 567 234 37 92 chr4 7414420 7414475 -176874187 - MER63A DNA MER1_type -1478 210 154 1903 131 17 3 chr4 7414475 7414765 -176873897 - AluSc SINE Alu -15 294 1 567 234 37 92 chr4 7414765 7414927 -176873735 - MER63A DNA MER1_type -1534 154 5 330 206 0 29 chr4 7415386 7415454 -176873208 - L3 LINE CR1 -533 1044 979 197 303 10 61 chr4 7415583 7415682 -176872980 - L2 LINE L2 -853 2461 2368 200 368 88 7 chr4 7415721 7415857 -176872805 - L3 LINE CR1 -1026 551 405 2141 71 0 7 chr4 7416536 7416818 -176871844 + AluSx SINE Alu 23 302 -10 294 333 71 0 chr4 7417106 7417232 -176871430 + L2 LINE L2 3138 3272 0 26 0 0 0 chr4 7418080 7418106 -176870556 + AT_rich Low_complexity Low_complexity 1 26 0 308 263 10 10 chr4 7419141 7419240 -176869422 + (CA)n Simple_repeat Simple_repeat 1 99 0 1184 247 241 10 chr4 7420128 7420614 -176868048 + L1MD2 LINE L1 5730 6327 -32 305 198 64 10 chr4 7420620 7420694 -176867968 + AluJ/FLAM SINE Alu 1 60 -242 249 301 139 8 chr4 7420694 7420953 -176867709 - L2 LINE L2 -1163 2151 1859 372 351 119 21 chr4 7420988 7421375 -176867287 + L2 LINE L2 2843 3267 -5 4532 80 17 19 chr4 7421641 7422159 -176866503 + L1PB2 LINE L1 5513 6031 -120 2354 75 0 7 chr4 7422159 7422464 -176866198 + AluSx SINE Alu 1 303 -9 4532 80 17 19 chr4 7422464 7422585 -176866077 + L1PB2 LINE L1 6031 6151 0 1711 211 29 27 chr4 7422835 7423248 -176865414 + MLT2D LTR ERVL 1 414 0 1263 185 22 128 chr4 7423413 7423819 -176864843 + MLT1A1 LTR MaLR 1 363 -2 323 295 62 18 chr4 7424104 7424216 -176864446 + MIR SINE MIR 107 223 -39 1596 196 164 56 chr4 7424300 7424850 -176863812 + MLT1E2 LTR MaLR 18 626 0 269 186 57 43 chr4 7426631 7426701 -176861961 - L1ME4a LINE L1 -78 6043 5973 756 194 114 0 chr4 7426962 7427137 -176861525 + L1MD3 LINE L1 7793 7987 -8 317 292 62 80 chr4 7427751 7428076 -176860586 + L2 LINE L2 2915 3233 -39 735 335 13 4 chr4 7428174 7428401 -176860261 - MIR SINE MIR -33 229 1 194 318 39 70 chr4 7429266 7429395 -176859267 + L2 LINE L2 3111 3235 -37 478 282 35 53 chr4 7429455 7429682 -176858980 - MIR SINE MIR -12 250 28 203 256 0 0 chr4 7429699 7429742 -176858920 + L2 LINE L2 3271 3313 0 209 315 13 0 chr4 7429760 7429847 -176858815 + GA-rich Low_complexity Low_complexity 1 88 0 368 292 128 65 chr4 7429857 7430210 -176858452 - L2 LINE L2 -63 3209 2835 421 268 190 0 chr4 7430341 7430483 -176858179 + MIR SINE MIR 20 188 -74 1869 137 23 0 chr4 7430686 7430985 -176857677 + AluSx SINE Alu 1 306 -6 259 314 69 0 chr4 7431671 7431773 -176856889 + MIR3 SINE MIR 11 119 -89 2883 128 16 5 chr4 7431922 7432345 -176856317 + MSTA LTR MaLR 1 428 0 7881 181 47 7 chr4 7432347 7433852 -176854810 + MSTA-int LTR MaLR 3 1567 -13 2584 111 47 8 chr4 7433853 7434239 -176854423 + MSTA LTR MaLR 28 428 0 1165 305 55 19 chr4 7434247 7434988 -176853674 - L1M4 LINE L1 -2231 3915 3148 806 104 0 17 chr4 7435011 7435126 -176853536 - AluSg/x SINE Alu -17 295 183 24 32 0 0 chr4 7435401 7435432 -176853230 + AT_rich Low_complexity Low_complexity 1 31 0 496 245 193 30 chr4 7435724 7435957 -176852705 - L2 LINE L2 -940 2374 2104 1322 190 43 4 chr4 7436036 7436182 -176852480 - AluJo SINE Alu -30 282 120 207 0 0 0 chr4 7436182 7436205 -176852457 + (TA)n Simple_repeat Simple_repeat 1 23 0 1322 190 43 4 chr4 7436205 7436316 -176852346 - AluJo SINE Alu -192 120 15 2181 207 21 31 chr4 7436668 7437190 -176851472 - Charlie1b DNA MER1_type -6 517 1 261 283 11 33 chr4 7437211 7437303 -176851359 - L2 LINE L2 -62 3210 3121 269 327 44 9 chr4 7437357 7437470 -176851192 + L2 LINE L2 2904 3020 -252 197 284 0 15 chr4 7437567 7437615 -176851047 + L2 LINE L2 3207 3254 -18 1218 67 0 0 chr4 7437615 7437793 -176850869 + (TAGA)n Simple_repeat Simple_repeat 1 178 0 291 28 0 0 chr4 7437793 7437829 -176850833 + (CATA)n Simple_repeat Simple_repeat 1 36 0 197 284 0 15 chr4 7437829 7437846 -176850816 + L2 LINE L2 3252 3272 0 203 256 49 12 chr4 7437948 7438030 -176850632 - MIR SINE MIR -65 143 59 193 261 101 43 chr4 7438477 7438546 -176850116 + MIR SINE MIR 109 181 -81 329 281 99 18 chr4 7439232 7439421 -176849241 - MIR SINE MIR -33 229 29 826 168 8 0 chr4 7441078 7441209 -176847453 - FLAM_C SINE Alu -10 133 2 214 242 0 97 chr4 7441420 7441482 -176847180 + MIR3 SINE MIR 99 154 -54 202 229 202 9 chr4 7442264 7442373 -176846289 + MIR SINE MIR 119 248 -14 21 36 0 0 chr4 7442613 7442641 -176846021 + GC_rich Low_complexity Low_complexity 1 28 0 555 228 179 0 chr4 7443534 7443679 -176844983 - MIR SINE MIR -8 254 84 376 310 76 18 chr4 7444230 7444401 -176844261 - MIR SINE MIR -75 187 7 210 330 44 0 chr4 7444406 7444497 -176844165 - MIR SINE MIR -96 166 72 202 260 231 0 chr4 7444485 7444589 -176844073 - L2 LINE L2 -697 2617 2490 * 325 278 125 65 chr4 7444654 7444737 -176843925 + L2 LINE L2 2698 2775 -497 2240 92 3 0 chr4 7444737 7445041 -176843621 + AluSx SINE Alu 1 305 -7 1551 118 4 0 chr4 7445041 7445267 -176843395 + AluSp SINE Alu 76 304 -9 325 278 125 65 chr4 7445267 7445591 -176843071 + L2 LINE L2 2774 3123 -149 1385 239 75 66 chr4 7445664 7446133 -176842529 - HAL1 LINE L1 0 2507 2029 1748 179 0 22 chr4 7446133 7446452 -176842210 - AluJb SINE Alu 0 312 1 1385 239 75 66 chr4 7446452 7446636 -176842026 - HAL1 LINE L1 -478 2029 1848 872 193 34 6 chr4 7446637 7446813 -176841849 + MER5A DNA MER1_type 6 186 -3 2168 229 117 41 chr4 7446819 7447080 -176841582 - HAL1 LINE L1 -696 1811 1571 2333 90 0 0 chr4 7447080 7447381 -176841281 - AluSg SINE Alu -9 301 1 2168 229 117 41 chr4 7447381 7447397 -176841265 - HAL1 LINE L1 -936 1571 1558 4150 159 44 24 chr4 7447397 7448164 -176840498 - LTR39 LTR ERV1 0 783 1 2168 229 117 41 chr4 7448164 7448784 -176839878 - HAL1 LINE L1 -949 1558 845 962 288 142 12 chr4 7448930 7449354 -176839308 + L2 LINE L2 2829 3307 -6 3280 224 11 3 chr4 7449462 7450109 -176838553 + MER82 DNA MER2_type 2 653 0 1275 259 63 46 chr4 7450835 7451360 -176837302 - L1ME2 LINE L1 -11 6153 5620 362 322 22 44 chr4 7451613 7451793 -176836869 - MIR SINE MIR -57 205 30 2124 177 46 37 chr4 7452517 7452924 -176835738 + L1MB8 LINE L1 5655 6070 -108 2243 125 3 0 chr4 7452924 7453221 -176835441 + AluSx SINE Alu 1 298 -14 2124 177 46 37 chr4 7453221 7453332 -176835330 + L1MB8 LINE L1 6070 6178 0 521 268 92 44 chr4 7453361 7453589 -176835073 + MIR SINE MIR 14 252 -10 2332 105 0 3 chr4 7454522 7454827 -176833835 - AluSg SINE Alu -6 304 1 594 206 58 13 chr4 7455033 7455188 -176833474 + MER45A DNA AcHobo 1 162 -16 200 171 143 71 chr4 7455355 7455425 -176833237 + L3b LINE CR1 1489 1563 -20 * 257 269 25 84 chr4 7455404 7455523 -176833139 + MIR SINE MIR 104 215 -47 533 284 20 0 chr4 7455829 7455977 -176832685 + MIR SINE MIR 2 152 -110 6619 72 25 0 chr4 7456065 7457245 -176831417 - L1PA10 LINE L1 0 6168 4960 10417 28 0 0 chr4 7457911 7459910 -176828752 - L1PA2 LINE L1 0 6155 4157 203 260 0 20 chr4 7459985 7460035 -176828627 - MIR SINE MIR -68 140 92 669 235 0 0 chr4 7460304 7460483 -176828179 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 512 277 84 25 chr4 7461075 7461277 -176827385 - MIR SINE MIR -12 250 37 584 330 85 0 chr4 7461383 7461607 -176827055 + MIR SINE MIR 12 254 -8 356 225 22 0 chr4 7461645 7461734 -176826928 - MER103 DNA DNA -73 93 3 180 350 41 0 chr4 7462082 7462179 -176826483 - L2 LINE L2 -304 2968 2868 311 213 13 0 chr4 7463061 7463136 -176825526 - MIR SINE MIR -64 144 69 188 286 18 0 chr4 7463279 7463335 -176825327 - MIR SINE MIR -13 249 193 532 196 65 36 chr4 7463426 7463564 -176825098 - MIR SINE MIR -86 176 35 223 182 45 0 chr4 7463967 7464011 -176824651 + MIR SINE MIR 108 153 -109 1859 169 7 3 chr4 7464069 7464370 -176824292 + AluJb SINE Alu 1 302 -10 470 233 169 29 chr4 7465133 7465305 -176823357 - MIR SINE MIR -14 248 53 1730 189 14 0 chr4 7465699 7465826 -176822836 + AluJo SINE Alu 1 125 -187 189 0 0 0 chr4 7465826 7465847 -176822815 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 1730 189 14 0 chr4 7465847 7466016 -176822646 + AluJo SINE Alu 125 301 -11 181 266 266 64 chr4 7466435 7466544 -176822118 - L2 LINE L2 -40 3232 3102 387 253 32 11 chr4 7466674 7466769 -176821893 + MIR SINE MIR 24 120 -88 473 190 15 0 chr4 7466985 7467082 -176821580 - MIR SINE MIR -65 143 45 583 268 122 58 chr4 7467480 7467622 -176821040 + L1MD2 LINE L1 5989 6121 -238 255 61 0 0 chr4 7467622 7467655 -176821007 + (CA)n Simple_repeat Simple_repeat 2 34 0 583 268 122 58 chr4 7467655 7467796 -176820866 + L1MD2 LINE L1 6121 6298 -61 15408 120 24 29 chr4 7467796 7469971 -176818691 + Tigger1 DNA MER2_type 3 2166 -252 1766 110 0 4 chr4 7469971 7470207 -176818455 - AluSc SINE Alu -74 235 1 15408 120 24 29 chr4 7470207 7470459 -176818203 + Tigger1 DNA MER2_type 2166 2418 0 583 268 122 58 chr4 7470459 7470503 -176818159 + L1MD2 LINE L1 6298 6338 -21 391 269 52 72 chr4 7470708 7470901 -176817761 + MIR SINE MIR 40 228 -34 605 187 13 47 chr4 7470955 7471105 -176817557 + MER58B DNA MER1_type 197 341 0 834 168 0 0 chr4 7471125 7471256 -176817406 + FLAM_C SINE Alu 1 131 -2 2666 200 26 17 chr4 7471308 7471529 -176817133 + L1MC/D LINE L1 4839 5057 -1302 2453 106 0 3 chr4 7471529 7471841 -176816821 + AluSx SINE Alu 2 312 0 2666 200 26 17 chr4 7471841 7472565 -176816097 + L1MC/D LINE L1 5057 5788 -571 238 170 85 0 chr4 7472767 7472814 -176815848 + L2 LINE L2 3263 3313 0 259 288 7 7 chr4 7472922 7473007 -176815655 + GA-rich Low_complexity Low_complexity 1 85 0 223 254 16 16 chr4 7473535 7473598 -176815064 + MIR SINE MIR 20 82 -180 180 228 0 0 chr4 7473728 7473785 -176814877 + (CAT)n Simple_repeat Simple_repeat 3 59 0 318 330 9 0 chr4 7473797 7473906 -176814756 + (CAT)n Simple_repeat Simple_repeat 2 111 0 404 264 6 0 chr4 7473919 7474093 -176814569 + (CAT)n Simple_repeat Simple_repeat 1 175 0 1273 201 95 77 chr4 7474116 7474589 -176814073 - MER66A LTR ERV1 0 478 97 344 277 5 0 chr4 7474658 7474870 -176813792 + (CAT)n Simple_repeat Simple_repeat 1 213 0 426 311 37 0 chr4 7475088 7475223 -176813439 - MIR SINE MIR -37 225 86 200 259 19 0 chr4 7475225 7475279 -176813383 + (TAA)n Simple_repeat Simple_repeat 2 56 0 219 292 0 45 chr4 7475290 7475379 -176813283 + MIR SINE MIR 16 100 -108 358 328 56 0 chr4 7475521 7475646 -176813016 + MIR SINE MIR 57 188 -74 313 282 76 112 chr4 7477110 7477493 -176811169 - L2 LINE L2 -2 3270 2902 1089 140 0 0 chr4 7479797 7480155 -176808507 + (TCCA)n Simple_repeat Simple_repeat 1 358 0 616 211 21 84 chr4 7480199 7480389 -176808273 - MER5B DNA MER1_type 0 178 1 404 324 21 14 chr4 7480430 7480575 -176808087 - MER5B DNA MER1_type -32 146 1 1224 85 5 70 chr4 7480578 7480777 -176807885 + MER30B DNA MER1_type 1 186 -4 394 311 13 12 chr4 7480779 7480907 -176807755 + MIR SINE MIR 34 156 -64 317 222 37 0 chr4 7481217 7481298 -176807364 + MER5A DNA MER1_type 4 87 -102 211 286 0 0 chr4 7481766 7481815 -176806847 - L2 LINE L2 -6 3307 3259 908 291 23 16 chr4 7481821 7482079 -176806583 + MIR SINE MIR 1 260 -2 287 366 10 0 chr4 7482443 7482544 -176806118 - MIR SINE MIR -3 259 158 227 372 27 16 chr4 7485389 7485572 -176803090 + MIR SINE MIR 70 254 -8 703 228 54 11 chr4 7485972 7486156 -176802506 + MIR SINE MIR 1 192 -70 210 347 10 0 chr4 7486707 7486805 -176801857 + (TGAA)n Simple_repeat Simple_repeat 1 99 0 446 257 35 20 chr4 7488340 7488492 -176800170 + MIR SINE MIR 32 185 -62 1463 190 15 90 chr4 7488781 7489171 -176799491 - MLT1B LTR MaLR -2 388 28 446 147 186 39 chr4 7489138 7489267 -176799395 - MLT1B LTR MaLR -242 148 1 * 1251 220 66 42 chr4 7489269 7489694 -176798968 + MLT1C LTR MaLR 17 463 -4 237 364 30 0 chr4 7489717 7489816 -176798846 - MIR SINE MIR -35 227 126 255 276 35 11 chr4 7489933 7490020 -176798642 + MIR SINE MIR 31 119 -89 219 350 0 40 chr4 7490028 7490128 -176798534 - MIR SINE MIR -159 103 8 3279 150 53 26 chr4 7490134 7490720 -176797942 - LTR43 LTR ERV1 0 602 1 307 214 29 14 chr4 7490734 7490804 -176797858 + MIR SINE MIR 8 78 -184 188 219 0 0 chr4 7490923 7490955 -176797707 - MER5A DNA MER1_type -1 188 157 235 265 92 0 chr4 7490966 7491039 -176797623 - MIR SINE MIR -76 132 51 1586 132 156 93 chr4 7491081 7491459 -176797203 - MER4A LTR ERV1 0 664 263 485 104 42 21 chr4 7491461 7491557 -176797105 - MER4A LTR ERV1 -566 98 1 2359 98 3 0 chr4 7491885 7492192 -176796470 - AluSq SINE Alu -5 308 1 281 312 127 26 chr4 7492390 7492579 -176796083 + MIR SINE MIR 43 250 -12 1862 189 78 71 chr4 7492680 7493246 -176795416 - LTR59 LTR ERV1 -11 586 17 518 198 35 9 chr4 7493256 7493372 -176795290 - L1PA3 LINE L1 -10 6145 6027 376 283 147 22 chr4 7493670 7493854 -176794808 + L1MC4 LINE L1 7525 7731 -311 1854 119 101 0 chr4 7493887 7494164 -176794498 - AluSx SINE Alu -7 305 1 2096 191 87 17 chr4 7494209 7494691 -176793971 - MER34 LTR ERV1 -15 527 12 241 258 155 7 chr4 7494816 7494971 -176793691 + L1MC5 LINE L1 7703 7880 -81 608 299 83 24 chr4 7495112 7495523 -176793139 + L1ME4a LINE L1 5563 5997 -124 3528 73 54 0 chr4 7495551 7496029 -176792633 + L1PA8 LINE L1 5668 6171 -1 344 246 35 18 chr4 7496168 7496282 -176792380 - L1ME1 LINE L1 -5 6161 6046 1248 180 3 52 chr4 7496307 7496596 -176792066 - L1MC3 LINE L1 -2 7783 7509 191 224 24 118 chr4 7497008 7497093 -176791569 + L2 LINE L2 2697 2773 -541 596 219 12 21 chr4 7497381 7497801 -176790861 + (TCCA)n Simple_repeat Simple_repeat 1 416 0 345 378 31 0 chr4 7497803 7497930 -176790732 - L2 LINE L2 -4 3268 3138 866 223 175 41 chr4 7498801 7499195 -176789467 - MLT1C LTR MaLR 0 467 21 2339 113 0 0 chr4 7499394 7499696 -176788966 - AluSx SINE Alu -10 302 1 579 220 124 6 chr4 7499760 7499937 -176788725 + MER58C DNA MER1_type 1 198 -17 458 320 51 6 chr4 7500280 7500455 -176788207 - MIR SINE MIR 0 262 80 1407 140 62 135 chr4 7501089 7501460 -176787202 + MER2 DNA MER2_type 1 344 0 471 331 12 17 chr4 7501628 7501800 -176786862 + MIR SINE MIR 92 262 0 208 308 84 35 chr4 7501852 7501995 -176786667 - MIR3 SINE MIR -57 151 2 1978 117 0 0 chr4 7502490 7502773 -176785889 + AluSx SINE Alu 25 307 -5 349 303 80 17 chr4 7502777 7502952 -176785710 + Charlie8 DNA MER1_type 78 263 -2154 212 246 18 18 chr4 7503034 7503091 -176785571 + MIR3 SINE MIR 104 160 -48 227 289 78 39 chr4 7504254 7504382 -176784280 + MIR SINE MIR 13 145 -117 2195 205 152 5 chr4 7504383 7504950 -176783712 - MLT1E1 LTR MaLR -1 653 4 366 252 30 15 chr4 7505424 7505555 -176783107 + (TG)n Simple_repeat Simple_repeat 2 134 0 285 289 35 35 chr4 7505585 7505727 -176782935 + (CATG)n Simple_repeat Simple_repeat 1 142 0 642 326 52 17 chr4 7506169 7506402 -176782260 + MIR SINE MIR 11 251 -11 817 169 84 0 chr4 7506423 7506565 -176782097 + AluJb SINE Alu 137 290 -22 233 263 10 30 chr4 7506565 7506664 -176781998 + (TATG)n Simple_repeat Simple_repeat 4 100 0 490 242 253 10 chr4 7508368 7508566 -176780096 + MIR SINE MIR 17 262 0 1420 182 162 17 chr4 7509276 7509622 -176779040 - MSTD LTR MaLR 0 396 1 2022 150 80 102 chr4 7510690 7511169 -176777493 - MLT2B2 LTR ERVL 0 515 48 2207 87 3 13 chr4 7511169 7511480 -176777182 + AluSg1 SINE Alu 1 308 -1 2022 150 80 102 chr4 7511480 7511527 -176777135 - MLT2B2 LTR ERVL -467 48 1 246 282 71 24 chr4 7512073 7512158 -176776504 - L2 LINE L2 0 3272 3184 348 302 16 16 chr4 7512181 7512310 -176776352 + MER117 DNA MER1_type 27 155 -42 348 278 72 0 chr4 7512352 7512449 -176776213 - MIR SINE MIR -8 254 151 375 23 0 0 chr4 7512454 7512498 -176776164 + (TG)n Simple_repeat Simple_repeat 1 44 0 485 213 148 0 chr4 7513265 7513373 -176775289 + L2 LINE L2 3190 3313 0 279 355 35 18 chr4 7513591 7513760 -176774902 + L2 LINE L2 2898 3069 -203 985 242 7 28 chr4 7513841 7514094 -176774568 - MIR SINE MIR 0 262 12 1838 162 0 0 chr4 7514163 7514472 -176774190 + AluSx SINE Alu 1 309 -3 976 159 0 16 chr4 7514492 7514674 -176773988 + AluSg/x SINE Alu 129 307 -5 1719 236 77 19 chr4 7515292 7515771 -176772891 - LTR53 LTR ERVL -12 507 1 709 83 21 0 chr4 7515941 7516037 -176772625 - AluJo SINE Alu -176 136 39 321 269 0 0 chr4 7516346 7516413 -176772249 + MIR SINE MIR 86 152 -110 2152 181 55 22 chr4 7518155 7518607 -176770055 - MLT1C LTR MaLR 0 467 1 190 361 46 0 chr4 7519380 7519510 -176769152 + L2 LINE L2 2801 2936 -378 240 276 168 22 chr4 7519510 7519695 -176768967 + LTR16A1 LTR ERVL 1 212 -245 826 208 34 5 chr4 7519837 7520044 -176768618 + LTR16A1 LTR ERVL 245 457 0 419 261 125 33 chr4 7520091 7520275 -176768387 + L2 LINE L2 3006 3206 -107 288 204 159 21 chr4 7520438 7520583 -176768079 - MIR SINE MIR -57 205 38 21 36 0 0 chr4 7520771 7520799 -176767863 + AT_rich Low_complexity Low_complexity 1 28 0 540 201 37 0 chr4 7521618 7521737 -176766925 + MER63 DNA MER1_type 679 1653 -35 2126 115 3 6 chr4 7522794 7523107 -176765555 - AluSx SINE Alu 0 312 1 181 167 0 48 chr4 7523255 7523297 -176765365 + L2 LINE L2 3014 3053 -219 370 312 64 57 chr4 7523366 7523664 -176764998 - L2 LINE L2 -1 3312 3013 2507 62 0 0 chr4 7524853 7525162 -176763500 - AluY SINE Alu -2 309 1 207 335 81 25 chr4 7525169 7525330 -176763332 + L2 LINE L2 2549 2718 -596 3730 136 62 0 chr4 7525447 7526045 -176762617 - LTR24C LTR ERV1 0 635 1 198 103 0 0 chr4 7526991 7527020 -176761642 + (A)n Simple_repeat Simple_repeat 1 29 0 286 285 8 39 chr4 7527501 7527631 -176761031 + (TATATG)n Simple_repeat Simple_repeat 1 126 0 406 279 66 0 chr4 7527651 7527773 -176760889 - MIR SINE MIR -48 214 85 376 265 15 45 chr4 7527835 7527967 -176760695 - MIR SINE MIR -74 188 61 185 270 0 81 chr4 7528103 7528177 -176760485 + MIR SINE MIR 115 182 -80 2301 151 27 117 chr4 7528530 7528975 -176759687 - MLT2B2 LTR ERVL -2 513 128 1858 135 10 7 chr4 7528975 7529271 -176759391 + AluSx SINE Alu 6 302 -10 2301 151 27 117 chr4 7529271 7529389 -176759273 - MLT2B2 LTR ERVL -387 128 1 228 245 19 47 chr4 7529825 7529931 -176758731 + CT-rich Low_complexity Low_complexity 4 106 0 661 223 7 7 chr4 7530832 7530971 -176757691 + MIR SINE MIR 35 173 -89 1057 269 56 6 chr4 7531063 7531405 -176757257 - L1MEc LINE L1 -5453 943 585 308 205 103 13 chr4 7531419 7531497 -176757165 - L1M4 LINE L1 -3317 2829 2745 352 95 16 16 chr4 7532231 7532294 -176756368 + (TCTA)n Simple_repeat Simple_repeat 3 65 0 311 133 22 0 chr4 7532294 7532339 -176756323 - Tigger2 DNA MER2_type -14 2704 2659 308 299 35 75 chr4 7532342 7532516 -176756146 + L1MEc LINE L1 266 432 -5964 2266 109 48 24 chr4 7532534 7532909 -176755753 - Tigger2 DNA MER2_type -54 2664 2281 2375 144 31 2 chr4 7532915 7533331 -176755331 - L1MA4A LINE L1 -6 6297 5870 399 183 0 14 chr4 7533341 7533412 -176755250 + MER8 DNA MER2_type 170 239 0 450 316 58 0 chr4 7533453 7533627 -176755035 - L1MC4a LINE L1 -1947 5861 5678 497 275 6 2 chr4 7533653 7533794 -176754868 - MIR SINE MIR -43 165 22 225 316 51 0 chr4 7534487 7534585 -176754077 + L2 LINE L2 2737 2839 -475 737 232 29 77 chr4 7534696 7535045 -176753617 - HAL1 LINE L1 0 2507 2176 1944 156 97 33 chr4 7535195 7535587 -176753075 - LTR59 LTR ERV1 -172 425 9 43506 35 23 1 chr4 7535589 7541602 -176747060 - L1PA3 LINE L1 -10 6145 1 303 28 0 0 chr4 7541667 7541703 -176746959 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 769 282 45 48 chr4 7541725 7542080 -176746582 - L2 LINE L2 -383 2931 2578 221 316 74 0 chr4 7542147 7542242 -176746420 + MIR SINE MIR 150 251 -11 2123 115 3 0 chr4 7542248 7542544 -176746118 + AluSx SINE Alu 1 297 -15 2616 113 6 6 chr4 7542736 7543100 -176745562 - THE1B LTR MaLR 0 364 1 1666 259 58 25 chr4 7543591 7544121 -176744541 - MER77 LTR ERV1 -4 601 54 2020 118 3 7 chr4 7544401 7544705 -176743957 + AluSx SINE Alu 1 303 -9 2626 170 41 12 chr4 7544755 7545244 -176743418 - MLT1D LTR MaLR -1 504 2 203 0 0 36 chr4 7545550 7545578 -176743084 + (TTTTA)n Simple_repeat Simple_repeat 4 30 0 2097 75 18 0 chr4 7545585 7545865 -176742797 - AluY SINE Alu -26 285 1 238 314 17 25 chr4 7546000 7546118 -176742544 + MIR3 SINE MIR 4 120 -88 525 285 90 70 chr4 7546501 7546813 -176741849 + L2 LINE L2 2955 3272 0 498 289 119 50 chr4 7546908 7547267 -176741395 - MLT1H LTR MaLR -16 533 40 221 154 0 26 chr4 7547861 7547900 -176740762 + CT-rich Low_complexity Low_complexity 2 39 0 381 270 108 14 chr4 7548056 7548204 -176740458 - MIR SINE MIR -1 261 100 335 299 92 49 chr4 7548906 7549090 -176739572 - L1ME3A LINE L1 -8 6145 5954 1290 217 72 6 chr4 7549165 7549497 -176739165 - L1ME3A LINE L1 -221 5932 5579 497 212 20 34 chr4 7549513 7549659 -176739003 - L1ME3A LINE L1 -1545 4584 4441 * 641 217 41 52 chr4 7549647 7550008 -176738654 - L1ME3A LINE L1 -2088 4041 2315 237 65 0 0 chr4 7550042 7550073 -176738589 + (TTCA)n Simple_repeat Simple_repeat 2 32 0 243 77 0 231 chr4 7550132 7550210 -176738452 + MIR SINE MIR 79 138 -124 894 273 39 84 chr4 7550210 7550927 -176737735 - L1ME3A LINE L1 -4905 1214 530 12982 24 0 1 chr4 7551508 7553860 -176734802 - L1PA3 LINE L1 -2 6153 3803 350 47 0 4 chr4 7553860 7553917 -176734745 + L1PA3 LINE L1 3753 3808 -2338 405 290 147 39 chr4 7554020 7554251 -176734411 + MIR SINE MIR 5 260 -2 195 268 37 49 chr4 7554225 7554307 -176734355 - L2 LINE L2 -4 3268 3188 * 1888 189 40 5 chr4 7554405 7554785 -176733877 - MER68 LTR ERV1 -4 558 166 1758 166 35 10 chr4 7555223 7555513 -176733149 + AluJb SINE Alu 1 297 -15 2195 126 13 3 chr4 7555734 7556043 -176732619 - AluSx SINE Alu 0 312 1 1115 31 15 0 chr4 7556058 7556188 -176732474 - AluY SINE Alu -6 305 174 279 0 0 0 chr4 7556205 7556236 -176732426 + (A)n Simple_repeat Simple_repeat 1 31 0 269 214 0 11 chr4 7556745 7556834 -176731828 + (TG)n Simple_repeat Simple_repeat 1 88 0 264 279 0 0 chr4 7556892 7557003 -176731659 + (TG)n Simple_repeat Simple_repeat 1 111 0 202 320 13 0 chr4 7557014 7557089 -176731573 + (TG)n Simple_repeat Simple_repeat 1 76 0 255 284 77 27 chr4 7557584 7557767 -176730895 + HAL1 LINE L1 2226 2417 -90 1689 202 152 5 chr4 7557827 7558262 -176730400 + MLT1D LTR MaLR 7 505 0 2276 99 13 7 chr4 7558273 7558575 -176730087 - AluSx SINE Alu -8 304 1 251 320 74 16 chr4 7559304 7559426 -176729236 + L2 LINE L2 3136 3264 -8 255 282 103 43 chr4 7559523 7559640 -176729022 + MER5B DNA MER1_type 54 177 -1 2594 57 3 0 chr4 7560259 7560558 -176728104 + AluY SINE Alu 1 300 -11 1840 192 93 25 chr4 7560888 7561361 -176727301 + MLT1D LTR MaLR 1 505 0 282 279 15 0 chr4 7561408 7561476 -176727186 + MIR SINE MIR 7 75 -187 740 254 121 4 chr4 7561560 7561800 -176726862 + L2 LINE L2 1933 2200 -1114 1149 230 7 35 chr4 7561807 7562090 -176726572 - MLT1E LTR MaLR 0 593 319 946 263 207 0 chr4 7562090 7562482 -176726180 + L2 LINE L2 2235 2707 -607 956 140 92 0 chr4 7562502 7562666 -176725996 - MER30 DNA MER1_type -51 179 1 392 270 162 7 chr4 7562678 7562826 -176725836 + MER104 DNA Tc2 1 171 -9 470 262 92 19 chr4 7562830 7563141 -176725521 + L2 LINE L2 2704 3102 -211 2167 139 0 0 chr4 7563566 7563868 -176724794 + AluSx SINE Alu 1 302 -10 248 242 21 84 chr4 7564251 7564346 -176724316 + MIR SINE MIR 8 96 -166 357 233 69 80 chr4 7564405 7564478 -176724184 + L1MEd LINE L1 859 931 -5188 2186 99 13 20 chr4 7564478 7564780 -176723882 + AluSx SINE Alu 1 300 -12 357 233 69 80 chr4 7564780 7564968 -176723694 + L1MEd LINE L1 931 1117 -5002 756 236 51 25 chr4 7565294 7565531 -176723131 + MER90 LTR ERV1 1 243 -332 277 247 74 0 chr4 7565593 7565674 -176722988 + MER90 LTR ERV1 528 614 0 337 283 91 11 chr4 7565912 7566099 -176722563 + L1MEd LINE L1 2196 2397 -3732 255 280 53 33 chr4 7566114 7566264 -176722398 + L1MEd LINE L1 2452 2604 -3525 630 306 73 48 chr4 7566308 7567208 -176721454 + L1M4 LINE L1 4202 5132 -1014 336 221 52 0 chr4 7567499 7567576 -176721086 + MIR SINE MIR 95 175 -87 502 162 110 7 chr4 7567590 7567726 -176720936 - L1MB7 LINE L1 0 6184 6035 375 253 0 57 chr4 7568140 7568253 -176720409 - L1MC4 LINE L1 -1334 6988 1977 188 210 12 0 chr4 7568255 7568336 -176720326 + (TA)n Simple_repeat Simple_repeat 1 82 0 2196 128 0 13 chr4 7568336 7568640 -176720022 - AluSx SINE Alu -12 300 1 3091 117 42 16 chr4 7568673 7569179 -176719483 - L1PA16 LINE L1 -2 6164 5646 2170 131 3 3 chr4 7569299 7569605 -176719057 + AluSx SINE Alu 1 306 -6 226 269 29 39 chr4 7569644 7569748 -176718914 - L1PBa LINE L1 -3902 2961 2859 531 307 84 14 chr4 7569763 7570274 -176718388 - L1MC4 LINE L1 -4913 1503 1012 1613 195 48 11 chr4 7571280 7571655 -176717007 - MLT1B LTR MaLR -1 389 1 303 299 0 0 chr4 7571839 7571916 -176716746 - MIR SINE MIR -178 84 8 327 268 164 18 chr4 7572113 7572306 -176716356 + MIR SINE MIR 33 250 -12 218 343 20 10 chr4 7572779 7572878 -176715784 + MIR SINE MIR 45 144 -118 261 250 47 0 chr4 7573009 7573073 -176715589 - MIR SINE MIR -109 99 33 2359 109 3 0 chr4 7573989 7574300 -176714362 + AluSx SINE Alu 1 312 0 227 299 0 15 chr4 7575199 7575266 -176713396 - MLT1J LTR MaLR -202 309 244 2200 112 27 3 chr4 7575322 7575618 -176713044 + AluSx SINE Alu 1 303 -9 235 252 216 18 chr4 7575626 7575737 -176712925 - MLT1L LTR MaLR -355 260 128 3467 121 17 6 chr4 7576306 7576827 -176711835 - MER1A DNA MER1_type 0 527 1 196 277 31 0 chr4 7577399 7577464 -176711198 + MIR3 SINE MIR 88 154 -54 342 190 0 0 chr4 7577800 7577858 -176710804 + MER94 DNA DNA 54 111 -23 2262 109 10 0 chr4 7577869 7578163 -176710499 - AluSx SINE Alu -15 297 1 369 286 27 0 chr4 7579064 7579176 -176709486 - LTR16C LTR ERVL -2 489 375 287 281 86 29 chr4 7579214 7579353 -176709309 - MLT1E2 LTR MaLR -37 589 443 308 291 34 56 chr4 7579450 7579629 -176709033 - MER5A DNA MER1_type -5 184 10 4580 137 27 23 chr4 7579817 7580010 -176708652 - L1PB4 LINE L1 0 6156 5965 2397 82 7 7 chr4 7580010 7580304 -176708358 - AluSx SINE Alu -18 294 1 4580 137 27 23 chr4 7580304 7580933 -176707729 - L1PB4 LINE L1 -191 5965 5331 302 284 90 26 chr4 7581011 7581166 -176707496 + L2 LINE L2 3149 3313 0 229 191 0 0 chr4 7581166 7581213 -176707449 + GA-rich Low_complexity Low_complexity 2 48 0 392 143 12 0 chr4 7582038 7582122 -176706540 + CT-rich Low_complexity Low_complexity 2 86 0 358 250 176 0 chr4 7582901 7583049 -176705613 - MIR SINE MIR -13 249 76 180 246 146 18 chr4 7583098 7583208 -176705454 + MIR SINE MIR 23 146 -62 491 279 19 13 chr4 7583579 7583737 -176704925 + MIR3 SINE MIR 44 202 -6 185 206 0 0 chr4 7583775 7583809 -176704853 + MIR SINE MIR 116 149 -113 398 286 8 15 chr4 7583984 7584117 -176704545 + MIR3 SINE MIR 12 143 -65 618 264 56 0 chr4 7586592 7586770 -176701892 - MER20 DNA MER1_type -1 218 31 1893 92 7 33 chr4 7587157 7587428 -176701234 - AluSg SINE Alu -46 264 1 690 258 154 27 chr4 7588897 7589196 -176699466 - MER69 DNA AcHobo -2184 342 6 991 208 59 24 chr4 7589196 7589451 -176699211 - LTR48B LTR ERV1 0 644 381 351 314 33 8 chr4 7589945 7590066 -176698596 - MER5A DNA MER1_type -3 186 63 593 290 67 37 chr4 7590191 7590491 -176698171 + LTR16B LTR ERVL 1 309 -155 411 163 8 39 chr4 7590492 7590621 -176698041 + CT-rich Low_complexity Low_complexity 1 125 0 399 234 47 58 chr4 7590624 7590795 -176697867 + LTR16B LTR ERVL 292 460 -4 1998 111 71 31 chr4 7591910 7592260 -176696402 + THE1B LTR MaLR 1 364 0 2462 134 7 34 chr4 7592379 7592789 -176695873 + MSTC LTR MaLR 30 428 0 604 274 50 5 chr4 7592925 7593126 -176695536 + L1M4 LINE L1 4848 5057 -1089 397 171 9 117 chr4 7593130 7593241 -176695421 + MLT1D LTR MaLR 1 99 -406 658 190 23 81 chr4 7593925 7594099 -176694563 + MIR SINE MIR 8 171 -91 423 226 0 0 chr4 7594165 7594267 -176694395 + (CACCAT)n Simple_repeat Simple_repeat 4 105 0 506 324 67 17 chr4 7596054 7596292 -176692370 - MIR SINE MIR -10 252 3 225 315 0 0 chr4 7596311 7596365 -176692297 + (TG)n Simple_repeat Simple_repeat 1 54 0 2049 160 102 19 chr4 7596602 7597014 -176691648 + MER83 LTR ERV1 3 448 0 392 301 77 32 chr4 7597017 7597173 -176691489 + MIR3 SINE MIR 42 204 -4 2114 151 83 2 chr4 7597380 7597777 -176690885 + MSTB1 LTR MaLR 4 432 0 220 200 0 0 chr4 7598405 7598445 -176690217 + CT-rich Low_complexity Low_complexity 2 41 0 583 275 63 5 chr4 7598470 7598659 -176690003 + MER58C DNA MER1_type 1 200 -15 210 246 105 44 chr4 7598894 7599008 -176689654 + MIR SINE MIR 102 222 -40 338 231 13 13 chr4 7599698 7599854 -176688808 + (CA)n Simple_repeat Simple_repeat 1 156 0 231 259 0 0 chr4 7599985 7600070 -176688592 + (CA)n Simple_repeat Simple_repeat 2 86 0 306 308 45 8 chr4 7600191 7600324 -176688338 - LTR16C LTR ERVL -2 489 352 435 244 6 11 chr4 7601500 7601676 -176686986 + (CA)n Simple_repeat Simple_repeat 1 175 0 188 167 0 48 chr4 7602272 7602314 -176686348 - MIR SINE MIR -63 145 106 335 251 78 18 chr4 7602659 7602826 -176685836 - L1ME4a LINE L1 -240 5881 5705 227 340 19 0 chr4 7602961 7603064 -176685598 - L1ME4a LINE L1 -473 5648 5544 1188 131 0 0 chr4 7603164 7603332 -176685330 + AluSg/x SINE Alu 137 304 -8 361 332 123 25 chr4 7603570 7603805 -176684857 - L1MC4a LINE L1 -1903 5905 5648 359 283 117 55 chr4 7603817 7604142 -176684520 - L1MC4a LINE L1 -2187 5621 5277 462 305 100 59 chr4 7604166 7604710 -176683952 - L1MC4a LINE L1 -893 5253 4673 1791 153 50 10 chr4 7604868 7605168 -176683494 - AluJo SINE Alu 0 312 1 2142 162 45 8 chr4 7605855 7606256 -176682406 + L1MB7 LINE L1 5752 6167 -17 1464 229 67 27 chr4 7606719 7607081 -176681581 + MLT1C LTR MaLR 1 386 -81 2858 13 0 0 chr4 7607081 7607387 -176681275 - AluYa5 SINE Alu -5 306 1 1464 229 67 27 chr4 7607387 7607473 -176681189 + MLT1C LTR MaLR 386 467 0 335 269 92 17 chr4 7607478 7607597 -176681065 + MIR SINE MIR 108 235 -27 2434 57 3 10 chr4 7607684 7607980 -176680682 + AluY SINE Alu 1 294 -17 2050 195 20 15 chr4 7608143 7608537 -176680125 + MSTD LTR MaLR 1 396 0 254 125 21 0 chr4 7609594 7609642 -176679020 + GA-rich Low_complexity Low_complexity 2 50 0 2015 117 25 18 chr4 7611269 7611623 -176677039 + AluSq SINE Alu 1 356 0 701 283 211 24 chr4 7611750 7612635 -176676027 - L2 LINE L2 0 3313 2269 284 339 9 9 chr4 7612697 7612812 -176675850 + L2 LINE L2 2947 3061 -211 952 229 138 14 chr4 7613936 7614285 -176674377 - LTR16C LTR ERVL -2 489 98 763 225 35 0 chr4 7614439 7614612 -176674050 + MER3 DNA MER1_type 19 197 -12 257 214 0 18 chr4 7614668 7614724 -176673938 + MIR SINE MIR 96 150 -112 726 228 85 5 chr4 7614805 7615016 -176673646 + MER33 DNA MER1_type 1 228 -96 290 276 69 17 chr4 7615552 7615668 -176672994 - MER5C DNA MER1_type -202 122 1 2007 132 23 23 chr4 7615820 7615939 -176672723 + AluSx SINE Alu 1 119 -193 2022 72 4 0 chr4 7615939 7616188 -176672474 + AluY SINE Alu 61 310 -1 2007 132 23 23 chr4 7616188 7616378 -176672284 + AluSx SINE Alu 118 310 -2 537 161 0 0 chr4 7616492 7616622 -176672040 + (CA)n Simple_repeat Simple_repeat 1 130 0 290 239 92 46 chr4 7617111 7617241 -176671421 - MIR3 SINE MIR -10 198 63 469 318 44 12 chr4 7617506 7617708 -176670954 + MIR SINE MIR 44 250 -12 28 29 0 0 chr4 7617870 7617905 -176670757 + AT_rich Low_complexity Low_complexity 1 35 0 294 280 30 8 chr4 7618470 7618602 -176670060 + HAL1 LINE L1 102 236 -2271 951 301 31 29 chr4 7618676 7619061 -176669601 + L1ME3A LINE L1 5564 5949 -221 1171 257 111 36 chr4 7619063 7619615 -176669047 + MLT1E LTR MaLR 1 593 0 2105 137 0 10 chr4 7619921 7620221 -176668441 + AluSx SINE Alu 1 297 -15 251 314 66 0 chr4 7620341 7620462 -176668200 + MLT1E-int LTR MaLR 725 853 -518 1948 116 6 75 chr4 7620504 7620822 -176667840 - AluSx SINE Alu -16 296 1 734 297 81 48 chr4 7620929 7621326 -176667336 + MLT1E-int LTR MaLR 961 1370 -1 426 292 0 8 chr4 7621327 7621447 -176667215 + MLT1E LTR MaLR 3 121 -472 519 294 119 0 chr4 7621618 7621795 -176666867 + MIR SINE MIR 31 228 -34 225 301 204 28 chr4 7621858 7622055 -176666607 + L2 LINE L2 2413 2574 -740 1445 128 26 148 chr4 7622055 7622399 -176666263 - AluYb8 SINE Alu -5 303 2 225 301 204 28 chr4 7622399 7622490 -176666172 + L2 LINE L2 2574 2752 -562 285 258 197 56 chr4 7622497 7622531 -176666131 - MIR SINE MIR -28 234 206 1271 184 76 65 chr4 7622531 7622901 -176665761 - MLT1A2 LTR MaLR 0 374 1 285 258 197 56 chr4 7622901 7623064 -176665598 - MIR SINE MIR -56 206 9 272 273 220 8 chr4 7624492 7624624 -176664038 - MIR SINE MIR -34 228 69 283 366 99 12 chr4 7624931 7625092 -176663570 - MER5B DNA MER1_type -1 177 3 200 288 51 34 chr4 7625130 7625248 -176663414 - MIR SINE MIR -72 136 17 975 154 7 0 chr4 7625624 7625929 -176662733 + GA-rich Low_complexity Low_complexity 1 307 0 350 261 126 18 chr4 7626124 7626235 -176662427 + MIR3 SINE MIR 39 161 -47 240 283 0 0 chr4 7626373 7626426 -176662236 + polypyrimidine Low_complexity Low_complexity 3 55 0 407 211 13 0 chr4 7626431 7626507 -176662155 - L2 LINE L2 0 3272 3196 1993 127 32 0 chr4 7627042 7627326 -176661336 + AluSx SINE Alu 5 297 -15 2364 192 24 10 chr4 7627338 7627837 -176660825 + L1MA8 LINE L1 5485 5990 -301 1454 147 65 47 chr4 7628163 7628442 -176660220 - AluJb SINE Alu -18 294 11 844 283 110 13 chr4 7628498 7629014 -176659648 + L1ME4a LINE L1 5313 5891 -230 433 315 108 50 chr4 7629439 7629801 -176658861 - L2 LINE L2 -63 3209 2827 392 235 9 0 chr4 7630273 7630388 -176658274 + (CACCAT)n Simple_repeat Simple_repeat 4 119 0 62 0 0 0 chr4 7631959 7632021 -176656641 + AT_rich Low_complexity Low_complexity 1 62 0 2158 60 4 19 chr4 7632028 7632296 -176656366 + AluY SINE Alu 1 264 -47 426 274 81 0 chr4 7632313 7632437 -176656225 + AluJb SINE Alu 164 297 -15 240 35 0 0 chr4 7634206 7634235 -176654427 + (TG)n Simple_repeat Simple_repeat 1 29 0 777 229 7 76 chr4 7634249 7634524 -176654138 - AluSp SINE Alu -31 282 27 215 288 34 0 chr4 7636130 7636189 -176652473 + MIR SINE MIR 129 189 -73 2436 211 60 11 chr4 7637175 7637272 -176651390 - L1 LINE L1 -2472 3674 3583 2281 107 0 0 chr4 7637272 7637561 -176651101 + AluSg SINE Alu 1 289 -21 2436 211 60 11 chr4 7637561 7638132 -176650530 - L1 LINE L1 -2563 3583 2973 5316 62 11 33 chr4 7638477 7639183 -176649479 + LTR8 LTR ERV1 1 691 0 318 305 17 17 chr4 7639263 7639381 -176649281 - MER5B DNA MER1_type -58 120 3 538 208 12 17 chr4 7640817 7640990 -176647672 + (CCA)n Simple_repeat Simple_repeat 2 173 0 * 669 189 11 11 chr4 7640947 7641127 -176647535 + (CAT)n Simple_repeat Simple_repeat 1 180 0 308 162 0 15 chr4 7641176 7641244 -176647418 + (CAT)n Simple_repeat Simple_repeat 1 67 0 740 295 59 8 chr4 7641244 7641481 -176647181 - MIR SINE MIR -1 261 13 217 410 8 22 chr4 7641502 7641636 -176647026 - L3b LINE CR1 -8 1575 1444 * 703 292 226 33 chr4 7641626 7642738 -176645924 + L2 LINE L2 1729 3053 -219 203 278 37 0 chr4 7642878 7642932 -176645730 + L2 LINE L2 3212 3267 -5 235 293 69 26 chr4 7643029 7643145 -176645517 - MIR SINE MIR -68 140 20 443 293 43 27 chr4 7643205 7643393 -176645269 - MIR SINE MIR -44 218 28 238 143 24 0 chr4 7643897 7643939 -176644723 + MLT1J2 LTR MaLR 100 142 -308 355 198 128 0 chr4 7644223 7644309 -176644353 + MIR SINE MIR 70 166 -96 30 27 0 0 chr4 7644486 7644523 -176644139 + AT_rich Low_complexity Low_complexity 1 37 0 538 282 116 33 chr4 7645000 7645241 -176643421 - L2 LINE L2 -1 3271 3011 1565 156 15 30 chr4 7646531 7646800 -176641862 - AluJo SINE Alu -13 299 35 216 97 0 0 chr4 7646821 7646852 -176641810 + (T)n Simple_repeat Simple_repeat 1 31 0 464 313 65 18 chr4 7646951 7647168 -176641494 - MIR SINE MIR -34 228 2 394 318 43 27 chr4 7648371 7648629 -176640033 - L2 LINE L2 -177 3095 2834 2289 78 3 10 chr4 7649061 7649357 -176639305 + AluSc SINE Alu 1 294 -15 519 294 119 0 chr4 7649617 7649794 -176638868 - MIR SINE MIR -34 228 31 426 292 0 8 chr4 7649965 7650085 -176638577 - MLT1E LTR MaLR -472 121 3 734 297 81 48 chr4 7650086 7650483 -176638179 - MLT1E-int LTR MaLR -1 1370 961 2018 107 6 75 chr4 7650590 7650908 -176637754 + AluSx SINE Alu 1 296 -16 251 314 66 0 chr4 7650950 7651071 -176637591 - MLT1E-int LTR MaLR -518 853 725 239 172 0 52 chr4 7651191 7651249 -176637413 - Alu SINE Alu -5 296 242 693 201 6 11 chr4 7651481 7651660 -176637002 + (CCA)n Simple_repeat Simple_repeat 1 178 0 313 189 0 45 chr4 7651655 7651766 -176636896 + (CACCAT)n Simple_repeat Simple_repeat 1 106 0 * 713 183 11 11 chr4 7651766 7651946 -176636716 + (CCA)n Simple_repeat Simple_repeat 1 180 0 432 218 6 26 chr4 7651950 7652106 -176636556 + (CACCAT)n Simple_repeat Simple_repeat 4 156 0 308 162 0 15 chr4 7652155 7652223 -176636439 + (CAT)n Simple_repeat Simple_repeat 1 67 0 740 295 59 8 chr4 7652223 7652460 -176636202 - MIR SINE MIR -1 261 13 217 410 8 22 chr4 7652481 7652615 -176636047 - L3b LINE CR1 -8 1575 1444 * 540 296 224 31 chr4 7652605 7653717 -176634945 + L2 LINE L2 1729 3053 -219 192 278 37 0 chr4 7653857 7653911 -176634751 + L2 LINE L2 3212 3267 -5 215 293 69 26 chr4 7654008 7654124 -176634538 - MIR SINE MIR -68 140 20 414 293 43 27 chr4 7654184 7654372 -176634290 - MIR SINE MIR -44 218 28 240 200 20 0 chr4 7654868 7654918 -176633744 + MLT1J2 LTR MaLR 92 142 -308 334 198 128 0 chr4 7655202 7655288 -176633374 + MIR SINE MIR 70 166 -96 30 27 0 0 chr4 7655465 7655502 -176633160 + AT_rich Low_complexity Low_complexity 1 37 0 476 282 116 33 chr4 7655979 7656220 -176632442 - L2 LINE L2 -1 3271 3011 1571 156 15 30 chr4 7657510 7657779 -176630883 - AluJo SINE Alu -13 299 35 216 97 0 0 chr4 7657800 7657831 -176630831 + (T)n Simple_repeat Simple_repeat 1 31 0 433 313 65 18 chr4 7657930 7658147 -176630515 - MIR SINE MIR -34 228 2 427 293 36 28 chr4 7659359 7659608 -176629054 - L2 LINE L2 -188 3084 2834 2375 80 3 7 chr4 7660040 7660341 -176628321 + AluSc SINE Alu 1 300 -9 1260 163 38 129 chr4 7660369 7660797 -176627865 + MLT1B LTR MaLR 2 374 0 475 269 54 81 chr4 7661517 7661740 -176626922 - L1MC5 LINE L1 -30 7931 7715 303 140 40 0 chr4 7661771 7661821 -176626841 + MER75 DNA T2_type 453 504 0 303 313 42 50 chr4 7661821 7662080 -176626582 - L1MC5 LINE L1 -253 7708 7452 189 0 0 0 chr4 7662608 7662629 -176626033 + (CA)n Simple_repeat Simple_repeat 2 22 0 432 37 0 0 chr4 7662954 7663008 -176625654 + (TA)n Simple_repeat Simple_repeat 1 54 0 2441 86 0 0 chr4 7663009 7663301 -176625361 - AluY SINE Alu -19 292 1 520 355 4 18 chr4 7663316 7663589 -176625073 - L1ME LINE L1 -301 5820 5552 1922 179 0 3 chr4 7663640 7663948 -176624714 - AluJo SINE Alu 0 312 6 217 214 62 107 chr4 7664022 7664101 -176624561 - L2 LINE L2 -60 3212 3138 2479 77 6 6 chr4 7664101 7664412 -176624250 + AluY SINE Alu 1 311 0 217 214 62 107 chr4 7664412 7664444 -176624218 - L2 LINE L2 -134 3138 3106 310 354 79 0 chr4 7664459 7664623 -176624039 - LTR16C LTR ERVL -26 465 289 213 261 99 49 chr4 7664730 7664872 -176623790 + L2 LINE L2 2701 2849 -465 390 227 0 11 chr4 7665177 7665265 -176623397 + L2 LINE L2 3186 3272 -41 2312 83 0 35 chr4 7666079 7666393 -176622269 + AluY SINE Alu 1 303 -8 252 333 34 0 chr4 7666396 7666513 -176622149 + MER103 DNA DNA 31 151 -15 184 239 130 33 chr4 7666652 7666744 -176621918 - MIR SINE MIR -78 130 30 22 0 0 0 chr4 7666985 7667007 -176621655 + AT_rich Low_complexity Low_complexity 1 22 0 2469 72 0 0 chr4 7667105 7667396 -176621266 + AluSx SINE Alu 1 291 -21 271 252 216 18 chr4 7667554 7667665 -176620997 + MIR SINE MIR 18 150 -112 266 320 105 63 chr4 7667798 7668034 -176620628 - L2 LINE L2 -75 3197 2941 2312 109 87 32 chr4 7668034 7668438 -176620224 - MSTA LTR MaLR 0 428 3 266 320 105 63 chr4 7668438 7668535 -176620127 - L2 LINE L2 -331 2941 2850 442 283 25 6 chr4 7668760 7668919 -176619743 + L1ME LINE L1 5566 5727 -394 437 290 24 12 chr4 7669330 7669499 -176619163 + GA-rich Low_complexity Low_complexity 5 175 0 191 283 9 88 chr4 7670252 7670365 -176618297 - L2 LINE L2 -237 3035 2932 2492 74 0 3 chr4 7670571 7670867 -176617795 + AluY SINE Alu 1 295 -16 353 232 181 36 chr4 7672732 7672919 -176615743 - MIR SINE MIR -11 251 34 199 189 0 0 chr4 7672992 7673029 -176615633 + MIR SINE MIR 112 148 -114 301 265 225 0 chr4 7673351 7673502 -176615160 + MIR SINE MIR 40 224 -38 281 308 0 33 chr4 7673725 7673816 -176614846 + L2 LINE L2 2673 2760 -554 426 278 49 0 chr4 7674198 7674342 -176614320 + MIR SINE MIR 73 223 -39 244 231 0 0 chr4 7674556 7674608 -176614054 + A-rich Low_complexity Low_complexity 4 55 0 542 286 164 8 chr4 7674623 7674885 -176613777 + L3 LINE CR1 1163 1465 -112 340 333 84 37 chr4 7676877 7677150 -176611512 + MLT1I LTR MaLR 98 383 -26 673 257 53 57 chr4 7677179 7677424 -176611238 - MIR SINE MIR 0 262 19 365 318 20 27 chr4 7677490 7677638 -176611024 - MIR3 SINE MIR -15 193 47 360 119 0 0 chr4 7677923 7677982 -176610680 + (TTCC)n Simple_repeat Simple_repeat 4 62 0 2256 97 7 3 chr4 7677993 7678281 -176610381 - AluSx SINE Alu -3 309 21 225 0 0 0 chr4 7678356 7678381 -176610281 + (CA)n Simple_repeat Simple_repeat 2 26 0 311 222 8 0 chr4 7679079 7679196 -176609466 + (CA)n Simple_repeat Simple_repeat 2 119 0 226 325 40 53 chr4 7679240 7679391 -176609271 + MIR SINE MIR 44 192 -70 222 191 0 0 chr4 7679985 7680027 -176608635 - MIR SINE MIR -113 149 108 27 0 0 0 chr4 7682897 7682924 -176605738 + GC_rich Low_complexity Low_complexity 1 27 0 225 132 57 19 chr4 7683317 7683370 -176605292 + (CCCCG)n Simple_repeat Simple_repeat 2 56 0 292 300 22 11 chr4 7684605 7684695 -176603967 - MIR3 SINE MIR -50 158 68 207 294 0 0 chr4 7685617 7685668 -176602994 - MIR SINE MIR -61 147 97 456 19 0 0 chr4 7685865 7685918 -176602744 + (CA)n Simple_repeat Simple_repeat 1 53 0 219 267 0 0 chr4 7686565 7686625 -176602037 + MIR SINE MIR 30 89 -119 195 255 21 0 chr4 7686836 7686883 -176601779 + L2 LINE L2 3266 3313 0 190 291 45 64 chr4 7688411 7688521 -176600141 - MIR SINE MIR -71 191 84 249 359 132 6 chr4 7688999 7689158 -176599504 - L3 LINE CR1 -3 1574 1396 717 247 67 9 chr4 7689257 7689480 -176599182 - MIR SINE MIR -15 247 12 195 374 17 35 chr4 7690478 7690593 -176598069 - MIR SINE MIR -62 146 34 1956 210 62 12 chr4 7690638 7691119 -176597543 + MLT1D LTR MaLR 1 505 0 276 300 120 0 chr4 7692157 7692257 -176596405 - MIR SINE MIR -132 130 19 575 265 18 6 chr4 7693418 7693588 -176595074 - MER5B DNA MER1_type -3 175 4 380 220 31 101 chr4 7694372 7694531 -176594131 + MIR3 SINE MIR 53 200 -8 282 328 72 0 chr4 7695047 7695172 -176593490 - MIR SINE MIR -97 165 32 360 268 9 36 chr4 7695684 7695796 -176592866 + L2 LINE L2 3205 3313 0 290 374 0 39 chr4 7696219 7696374 -176592288 - MIR SINE MIR -2 260 112 339 316 12 65 chr4 7696463 7696648 -176592014 - MIR3 SINE MIR -54 154 12 246 296 35 35 chr4 7696635 7696750 -176591912 + MIR3 SINE MIR 48 162 -46 * 539 226 57 31 chr4 7696858 7697017 -176591645 - Charlie8 DNA MER1_type -2183 234 72 2580 164 15 4 chr4 7697023 7697494 -176591168 + L1MB3 LINE L1 5677 6152 -31 246 159 0 0 chr4 7697505 7697549 -176591113 - L1MB3 LINE L1 -33 6150 6107 259 289 24 24 chr4 7697552 7697635 -176591027 - Charlie8 DNA MER1_type -2322 95 13 272 283 142 0 chr4 7698227 7698340 -176590322 - MIR SINE MIR -63 145 17 310 314 59 13 chr4 7698711 7698864 -176589798 - MIR SINE MIR -41 221 62 296 235 31 41 chr4 7699401 7699499 -176589163 + Charlie4 DNA MER1_type 1860 1956 -5 225 327 67 53 chr4 7699542 7699692 -176588970 - L2 LINE L2 0 3313 3162 186 267 307 0 chr4 7700010 7700111 -176588551 - L2 LINE L2 -225 3047 2916 373 305 26 19 chr4 7700583 7700737 -176587925 - MER5A DNA MER1_type 0 189 35 392 305 65 5 chr4 7701150 7701350 -176587312 + L1MEd LINE L1 848 1059 -5060 522 259 45 77 chr4 7701362 7701582 -176587080 - L2 LINE L2 -225 3088 2876 304 294 73 0 chr4 7701588 7701724 -176586938 + L3 LINE CR1 1257 1402 -175 252 59 0 0 chr4 7701724 7701758 -176586904 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 381 291 86 32 chr4 7701771 7701991 -176586671 - L2 LINE L2 0 3313 3082 313 318 95 26 chr4 7702634 7702939 -176585723 + L2 LINE L2 2571 2896 -418 4290 173 9 0 chr4 7703021 7703815 -176584847 - L1 LINE L1 -809 5337 4537 2515 61 13 13 chr4 7704594 7704905 -176583757 - AluY SINE Alu 0 311 1 214 405 69 15 chr4 7704975 7705106 -176583556 - L3 LINE CR1 -85 1492 1355 281 114 0 0 chr4 7705389 7705442 -176583220 + MER63A DNA MER1_type 1 53 -157 2373 89 0 10 chr4 7705467 7705771 -176582891 + AluSc SINE Alu 6 306 -3 506 228 57 20 chr4 7705787 7705951 -176582711 + MER63A DNA MER1_type 44 209 -1 342 0 0 0 chr4 7705957 7705995 -176582667 + (TG)n Simple_repeat Simple_repeat 2 39 0 216 67 0 0 chr4 7706018 7706048 -176582614 + (TGAA)n Simple_repeat Simple_repeat 2 31 0 2091 232 48 32 chr4 7706251 7706819 -176581843 - MER74B LTR ERVL 0 622 46 580 181 29 0 chr4 7706825 7706930 -176581732 + MIR SINE MIR 76 183 -79 189 345 0 0 chr4 7707025 7707083 -176581579 + L2 LINE L2 3240 3297 -16 415 287 0 0 chr4 7707539 7707668 -176580994 + L1ME4a LINE L1 5581 5709 -412 367 257 91 79 chr4 7707716 7707906 -176580756 + L1ME4a LINE L1 5836 6031 -90 2497 60 17 0 chr4 7707906 7708205 -176580457 - AluY SINE Alu -7 304 1 367 257 91 79 chr4 7708205 7708279 -176580383 + L1ME4a LINE L1 6031 6103 -18 381 331 127 22 chr4 7709225 7709500 -176579162 + MLT1L LTR MaLR 312 615 0 502 246 8 0 chr4 7710276 7710410 -176578252 - LTR16C LTR ERVL 0 491 357 298 203 14 29 chr4 7710833 7710902 -176577760 - MIR SINE MIR -108 154 87 2408 90 30 0 chr4 7711104 7711404 -176577258 - AluSc SINE Alu 0 309 1 342 331 23 39 chr4 7711980 7712110 -176576552 - MIR SINE MIR -118 144 17 429 278 28 34 chr4 7712491 7712667 -176575995 + MER5B DNA MER1_type 4 178 0 237 191 0 0 chr4 7712688 7712735 -176575927 - MIR SINE MIR -71 137 91 1454 174 62 50 chr4 7713552 7713891 -176574771 - MER2 DNA MER2_type 0 344 2 551 306 153 14 chr4 7713912 7714134 -176574528 + MIR SINE MIR 9 261 -1 2309 110 3 0 chr4 7714177 7714477 -176574185 - AluSx SINE Alu -11 301 1 274 312 52 0 chr4 7716147 7716224 -176572438 - L2 LINE L2 -19 3253 3173 508 285 58 0 chr4 7716825 7716997 -176571665 - MIR SINE MIR -53 209 28 2120 157 38 27 chr4 7717439 7717987 -176570675 + MLT2A2 LTR ERVL 1 554 0 1661 246 19 49 chr4 7719856 7720327 -176568335 + L1MB5 LINE L1 5712 6168 -6 1839 124 39 72 chr4 7721141 7721529 -176567133 + THE1C LTR MaLR 1 375 0 432 55 0 0 chr4 7722046 7722101 -176566561 + (CA)n Simple_repeat Simple_repeat 1 55 0 271 313 0 42 chr4 7722682 7722778 -176565884 + L2 LINE L2 3178 3269 -3 228 346 30 0 chr4 7722790 7722891 -176565771 - L1ME LINE L1 -320 5801 5698 308 244 13 0 chr4 7723888 7723966 -176564696 + MIR3 SINE MIR 107 185 -23 228 322 44 11 chr4 7724467 7724557 -176564105 + L2 LINE L2 3140 3232 -40 204 324 29 29 chr4 7725161 7725263 -176563399 - MIR SINE MIR -63 145 44 1568 172 0 23 chr4 7726178 7726439 -176562223 - AluJo SINE Alu -53 259 5 379 304 43 7 chr4 7726505 7726643 -176562019 + MIR SINE MIR 108 250 -12 310 248 9 29 chr4 7727588 7727693 -176560969 + GA-rich Low_complexity Low_complexity 4 106 0 280 243 90 5 chr4 7727805 7727926 -176560736 + MIR SINE MIR 94 227 -35 223 325 111 13 chr4 7728068 7728302 -176560360 + L2 LINE L2 2676 2932 -382 890 254 39 4 chr4 7728560 7728792 -176559870 + MIR SINE MIR 2 241 -21 414 293 230 11 chr4 7728963 7729137 -176559525 + L1MEd LINE L1 300 511 -5608 295 323 67 24 chr4 7729179 7729207 -176559455 + L1MEd LINE L1 652 677 -5442 2455 85 0 0 chr4 7729207 7729512 -176559150 + AluSg SINE Alu 1 305 -5 295 323 67 24 chr4 7729512 7729647 -176559015 + L1MEd LINE L1 677 822 -5297 287 217 161 139 chr4 7729675 7729905 -176558757 - MIR SINE MIR -5 257 23 377 312 74 56 chr4 7729905 7729985 -176558677 + L1MEd LINE L1 986 1063 -1427 2429 92 0 0 chr4 7729985 7730289 -176558373 + AluSq SINE Alu 5 308 -5 377 312 74 56 chr4 7730289 7730890 -176557772 + L1MEd LINE L1 1063 1775 -715 1167 292 50 25 chr4 7731282 7732057 -176556605 + L1MEd LINE L1 2114 2908 -3221 257 317 79 30 chr4 7732249 7732350 -176556312 + MIR3 SINE MIR 65 170 -38 192 77 0 0 chr4 7732483 7732509 -176556153 + (T)n Simple_repeat Simple_repeat 1 26 0 2223 80 7 11 chr4 7732661 7732974 -176555688 + AluSq SINE Alu 1 312 0 2838 129 16 0 chr4 7733567 7733993 -176554669 + MER72 LTR ERV1 290 722 0 1508 245 55 52 chr4 7734285 7734828 -176553834 + MLT1H LTR MaLR 2 546 -3 747 313 9 8 chr4 7734867 7735113 -176553549 - MIR SINE MIR -1 261 16 212 305 29 38 chr4 7735250 7735355 -176553307 - L2 LINE L2 0 3272 3169 195 161 232 0 chr4 7735429 7735485 -176553177 - MIR SINE MIR -113 149 81 399 286 67 37 chr4 7735983 7736212 -176552450 + MIR SINE MIR 4 237 -25 673 229 202 0 chr4 7736258 7736476 -176552186 - MIR SINE MIR 0 262 1 272 264 74 47 chr4 7736558 7736706 -176551956 + L1ME4a LINE L1 5967 6118 -3 381 256 31 56 chr4 7737183 7737343 -176551319 + MIR SINE MIR 57 212 -50 340 326 0 0 chr4 7738637 7738735 -176549927 - MIR SINE MIR -119 143 46 238 250 44 0 chr4 7739279 7739347 -176549315 - MIR3 SINE MIR -48 160 90 537 291 58 5 chr4 7739571 7739777 -176548885 + LTR33 LTR ERVL 50 266 -255 2976 128 22 27 chr4 7740086 7740644 -176548018 + LTR10E LTR ERV1 11 609 0 621 244 51 97 chr4 7741955 7742084 -176546578 + L1MC5 LINE L1 7120 7253 -708 2314 123 0 0 chr4 7742084 7742216 -176546446 + AluSx SINE Alu 1 132 -180 2225 104 7 3 chr4 7742216 7742513 -176546149 + AluSc SINE Alu 1 298 -11 2314 123 0 0 chr4 7742513 7742689 -176545973 + AluSx SINE Alu 131 309 -3 621 244 51 97 chr4 7742689 7742990 -176545672 + L1MC5 LINE L1 7253 7530 -431 1732 182 6 88 chr4 7742992 7743406 -176545256 + L1MB3 LINE L1 5744 6190 7 2391 99 0 7 chr4 7743406 7743708 -176544954 + AluSq SINE Alu 1 300 -13 1732 182 6 88 chr4 7743708 7743738 -176544924 + L1MB3 LINE L1 6190 6150 -33 348 67 34 157 chr4 7743738 7743827 -176544835 + MADE1 DNA Mariner 2 79 -1 1732 182 6 88 chr4 7743827 7743858 -176544804 + L1MB3 LINE L1 6149 6181 -2 720 257 124 40 chr4 7743858 7744212 -176544450 + L1MC5 LINE L1 7533 7916 -45 191 219 45 6 chr4 7744230 7744307 -176544355 + MIR SINE MIR 49 115 -93 201 303 15 0 chr4 7744496 7744562 -176544100 + L2 LINE L2 3231 3297 -16 348 83 0 0 chr4 7744570 7744618 -176544044 + (TGAA)n Simple_repeat Simple_repeat 2 49 0 341 245 51 10 chr4 7745084 7745182 -176543480 - MIR SINE MIR -75 133 32 325 247 12 0 chr4 7745781 7745862 -176542800 - L2 LINE L2 -6 3307 3226 319 73 36 0 chr4 7745932 7745987 -176542675 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 291 217 58 92 chr4 7746906 7747026 -176541636 + MLT1H LTR MaLR 421 536 -13 239 235 0 0 chr4 7747046 7747097 -176541565 - MIR SINE MIR -145 117 67 237 258 48 16 chr4 7747497 7747559 -176541103 - MER91A DNA MER1_type -10 186 123 324 297 195 0 chr4 7747598 7747726 -176540936 - MER91A DNA MER1_type -43 153 1 329 301 75 8 chr4 7748887 7749020 -176539642 - MIR SINE MIR -21 241 100 303 302 35 59 chr4 7749582 7749751 -176538911 + L1MC/D LINE L1 5494 5658 -2150 381 193 36 0 chr4 7749751 7749834 -176538828 - Tigger3(Golem) DNA MER2_type -1 3028 2943 390 252 109 0 chr4 7749940 7750087 -176538575 + L2 LINE L2 2928 3090 -182 360 206 63 48 chr4 7751556 7751682 -176536980 + L1MD3 LINE L1 7853 7980 -15 209 354 135 25 chr4 7752100 7752419 -176536243 + L2 LINE L2 2918 3271 -1 1092 176 39 5 chr4 7752603 7752808 -176535854 - MER20 DNA MER1_type -7 212 1 185 384 73 33 chr4 7753418 7753569 -176535093 - MIR SINE MIR 0 262 106 254 315 19 94 chr4 7754266 7754479 -176534183 - L2 LINE L2 -80 3192 2996 940 81 0 0 chr4 7754579 7754690 -176533972 + AluSx SINE Alu 13 123 -190 1362 126 0 0 chr4 7754845 7755027 -176533635 + AluSx SINE Alu 112 293 -19 266 273 13 0 chr4 7755048 7755125 -176533537 - MER116 DNA Mariner -1 79 2 866 264 35 9 chr4 7755126 7755353 -176533309 - MIR SINE MIR -3 259 27 228 313 15 0 chr4 7755865 7755932 -176532730 - L2 LINE L2 -4 3268 3201 457 311 79 6 chr4 7756314 7756491 -176532171 + MIR SINE MIR 10 199 -63 2288 112 23 0 chr4 7756691 7756996 -176531666 - AluSx SINE Alu 0 312 1 262 342 0 52 chr4 7757152 7757307 -176531355 - MIR SINE MIR 0 262 116 334 301 128 15 chr4 7757428 7757624 -176531038 - MIR SINE MIR -19 243 26 2532 79 0 0 chr4 7758189 7758492 -176530170 + AluSg SINE Alu 1 303 -7 199 315 33 22 chr4 7759238 7759330 -176529332 - MIR3 SINE MIR -49 159 67 266 284 68 0 chr4 7759518 7759592 -176529070 - MIR SINE MIR -111 151 73 240 70 23 0 chr4 7759780 7759823 -176528839 + L1PB1 LINE L1 6107 6150 -1 2158 127 3 0 chr4 7759895 7760202 -176528460 + AluSx SINE Alu 1 308 -4 2285 90 14 0 chr4 7760361 7760649 -176528013 - AluSc SINE Alu -17 292 1 303 297 55 21 chr4 7760776 7760921 -176527741 - L1ME LINE L1 -380 5741 5592 370 336 0 15 chr4 7761865 7762002 -176526660 + L2 LINE L2 2949 3083 -189 259 330 43 27 chr4 7762201 7762386 -176526276 + L2 LINE L2 2864 3051 -221 411 380 22 11 chr4 7762638 7762822 -176525840 + MIR SINE MIR 7 192 -70 255 276 20 51 chr4 7763315 7763413 -176525249 - MIR SINE MIR -8 254 160 2450 75 7 0 chr4 7765710 7766004 -176522658 - AluSc SINE Alu -13 296 1 259 303 65 45 chr4 7766138 7766293 -176522369 + MIR3 SINE MIR 14 171 -37 289 234 70 16 chr4 7766549 7766677 -176521985 + MIR3 SINE MIR 3 137 -71 196 330 70 51 chr4 7766719 7766992 -176521670 - L2 LINE L2 -1 3271 2994 209 253 209 0 chr4 7767792 7767883 -176520779 + MIR SINE MIR 36 145 -63 263 254 160 41 chr4 7768178 7768347 -176520315 - MIR3 SINE MIR -17 191 3 2554 86 0 3 chr4 7768558 7768871 -176519791 + AluSx SINE Alu 1 312 0 1652 136 93 4 chr4 7769197 7769490 -176519172 - AluJb SINE Alu 0 316 1 2492 68 0 34 chr4 7769865 7770187 -176518475 + AluY SINE Alu 1 311 0 736 264 50 21 chr4 7770270 7770512 -176518150 + MIR SINE MIR 14 262 0 859 279 119 22 chr4 7770516 7770968 -176517694 + MLT1H1 LTR MaLR 5 500 -55 245 371 19 9 chr4 7771207 7771420 -176517242 - L1MC/D LINE L1 -1959 5849 5635 1266 195 19 11 chr4 7771567 7771930 -176516732 + L1M4 LINE L1 5188 5556 -628 504 260 82 32 chr4 7771953 7772194 -176516468 + L1ME LINE L1 1003 1316 -5056 324 306 46 31 chr4 7772279 7772475 -176516187 + L1ME LINE L1 5477 5675 -446 506 363 46 16 chr4 7772663 7773159 -176515503 + L1MC4a LINE L1 5400 5910 -1898 255 121 35 17 chr4 7773256 7773314 -176515348 - L1MD1 LINE L1 -10 6232 6174 297 133 0 0 chr4 7773328 7773373 -176515289 - Alu SINE Alu -13 289 245 755 244 45 25 chr4 7773373 7773574 -176515088 - L1MD2 LINE L1 -76 6283 6079 220 255 0 0 chr4 7774771 7774822 -176513840 + (CA)n Simple_repeat Simple_repeat 2 52 0 21 36 0 0 chr4 7774829 7774857 -176513805 + AT_rich Low_complexity Low_complexity 1 28 0 2501 83 3 0 chr4 7775104 7775405 -176513257 - AluSp SINE Alu -11 302 1 635 250 38 19 chr4 7776268 7776428 -176512234 + MER63 DNA MER1_type 1 789 -47 247 319 14 0 chr4 7776677 7776749 -176511913 - L2 LINE L2 -522 2792 2720 779 272 92 10 chr4 7776862 7777237 -176511425 + L2 LINE L2 2624 3040 -273 597 318 68 58 chr4 7777265 7779389 -176509273 + L1MEc LINE L1 94 2246 -4150 2139 138 0 3 chr4 7779389 7779693 -176508969 + AluSx SINE Alu 3 305 -7 597 318 68 58 chr4 7779693 7779746 -176508916 + L1MEc LINE L1 2246 2297 -4099 * 1120 263 45 12 chr4 7779721 7780147 -176508515 + L1MEc LINE L1 2561 3000 -3215 2490 87 0 0 chr4 7780240 7780538 -176508124 - AluSg SINE Alu -12 298 1 667 226 99 31 chr4 7780638 7780830 -176507832 + L1MEc LINE L1 2987 3207 -3008 2266 113 3 3 chr4 7780830 7781140 -176507522 + AluSx SINE Alu 1 310 -2 667 226 99 31 chr4 7781140 7781239 -176507423 + L1MEc LINE L1 3207 3298 -2917 280 242 19 12 chr4 7781253 7781414 -176507248 + GA-rich Low_complexity Low_complexity 1 162 0 186 296 43 26 chr4 7781530 7781645 -176507017 - MIR SINE MIR -126 136 20 462 311 37 47 chr4 7781797 7781987 -176506675 + MIR SINE MIR 10 197 -65 759 291 112 31 chr4 7784642 7784919 -176503743 + L2 LINE L2 2894 3212 -101 479 271 155 0 chr4 7784919 7785100 -176503562 - MER3 DNA MER1_type 0 209 1 759 291 112 31 chr4 7785100 7785207 -176503455 + L2 LINE L2 3212 3309 -4 328 191 0 0 chr4 7785731 7785794 -176502868 + MIR SINE MIR 83 145 -117 208 200 0 0 chr4 7786910 7786950 -176501712 + MIR SINE MIR 106 145 -117 2268 125 0 0 chr4 7787236 7787548 -176501114 + AluSx SINE Alu 1 312 0 23 0 0 0 chr4 7787548 7787571 -176501091 + AT_rich Low_complexity Low_complexity 1 23 0 221 310 31 33 chr4 7787824 7787991 -176500671 + MIR SINE MIR 36 149 -59 192 156 0 0 chr4 7788281 7788313 -176500349 - MIR SINE MIR -67 141 110 2145 114 13 13 chr4 7788493 7788808 -176499854 + MER1B DNA MER1_type 25 339 0 396 0 0 0 chr4 7789176 7789220 -176499442 + (CA)n Simple_repeat Simple_repeat 2 45 0 262 267 158 10 chr4 7789338 7789439 -176499223 + L2 LINE L2 3183 3298 -15 347 266 0 0 chr4 7789496 7789575 -176499087 - L2 LINE L2 -3 3310 3232 324 287 32 25 chr4 7790672 7790829 -176497833 + GA-rich Low_complexity Low_complexity 2 159 0 357 259 35 9 chr4 7790961 7791077 -176497585 - L2 LINE L2 -8 3305 3187 376 352 35 0 chr4 7791115 7791257 -176497405 - MIR3 SINE MIR -45 163 17 479 317 52 46 chr4 7791416 7791854 -176496808 - L1ME4a LINE L1 -140 5981 5541 317 303 53 62 chr4 7791884 7792092 -176496570 - L1ME4a LINE L1 -2330 5478 5273 404 183 32 11 chr4 7792989 7793082 -176495580 + MIR SINE MIR 89 183 -79 394 182 0 13 chr4 7794557 7794634 -176494028 + MLT1A1 LTR MaLR 8 83 -282 1713 79 19 5 chr4 7794853 7795069 -176493593 - AluSg/x SINE Alu -11 301 83 487 284 77 7 chr4 7795374 7795529 -176493133 - L2 LINE L2 -5 3308 3143 1672 190 91 23 chr4 7795725 7796156 -176492506 + MLT1C LTR MaLR 6 465 -2 282 309 73 0 chr4 7796538 7796661 -176492001 + MIR SINE MIR 71 202 -60 958 148 9 7 chr4 7797110 7797360 -176491302 + (ATGGTG)n Simple_repeat Simple_repeat 1 427 0 1006 137 12 2 chr4 7797360 7797782 -176490880 + (ATG)n Simple_repeat Simple_repeat 1 604 0 1244 154 25 57 chr4 7797887 7798167 -176490495 - MER46B DNA MER2_type -90 146 1 1708 191 49 47 chr4 7798238 7798629 -176490033 + MLT1C LTR MaLR 1 395 -72 2046 143 13 3 chr4 7798629 7798930 -176489732 - AluJo SINE Alu -4 308 5 1708 191 49 47 chr4 7798930 7799004 -176489658 + MLT1C LTR MaLR 395 467 0 3566 214 26 5 chr4 7799374 7800187 -176488475 - L1M4 LINE L1 -1805 4341 3512 747 237 40 0 chr4 7800672 7800849 -176487813 - MER5A DNA MER1_type -5 184 1 418 319 106 0 chr4 7801239 7801427 -176487235 - MIR SINE MIR -27 235 28 361 308 165 21 chr4 7802314 7802551 -176486111 + L1ME4a LINE L1 5850 6120 -1 2279 117 0 13 chr4 7802984 7803300 -176485362 - AluSx SINE Alu 0 312 1 313 315 2 2 chr4 7803433 7803542 -176485120 + MIR SINE MIR 39 147 -61 213 121 0 0 chr4 7804187 7804220 -176484442 + (A)n Simple_repeat Simple_repeat 1 33 0 1625 201 69 38 chr4 7804376 7804650 -176484012 - MLT1C LTR MaLR 0 467 170 2315 99 0 0 chr4 7804650 7804964 -176483698 - AluSg SINE Alu 0 314 1 1625 201 69 38 chr4 7804964 7805134 -176483528 - MLT1C LTR MaLR -297 170 7 375 23 0 0 chr4 7805344 7805388 -176483274 + (TG)n Simple_repeat Simple_repeat 2 45 0 520 217 0 25 chr4 7805594 7805714 -176482948 - MIR SINE MIR -97 165 49 2209 94 39 0 chr4 7805907 7806207 -176482455 + AluSx SINE Alu 1 289 -23 249 229 29 14 chr4 7806704 7806774 -176481888 - LTR67 LTR ERVL -387 170 100 250 81 0 0 chr4 7807473 7807510 -176481152 + MIR SINE MIR 107 143 -65 247 330 62 9 chr4 7807859 7807971 -176480691 + MIR SINE MIR 78 195 -67 180 77 0 0 chr4 7808177 7808203 -176480459 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1959 123 0 0 chr4 7808204 7808480 -176480182 - AluSx SINE Alu -36 276 1 2145 163 31 16 chr4 7808932 7809313 -176479349 - MLT1B LTR MaLR 0 390 4 184 381 63 16 chr4 7809533 7809659 -176479003 + L2 LINE L2 3098 3229 -43 288 309 99 89 chr4 7809706 7810020 -176478642 - L2 LINE L2 -5 3267 2951 226 216 0 0 chr4 7810020 7810071 -176478591 - MLT1I LTR MaLR -1 408 358 2095 131 40 35 chr4 7810078 7810451 -176478211 - THE1C LTR MaLR 0 375 1 22 0 0 0 chr4 7811400 7811422 -176477240 + AT_rich Low_complexity Low_complexity 1 22 0 3321 168 114 26 chr4 7811602 7811777 -176476885 - L1MCa LINE L1 -3926 2500 2342 2213 110 0 0 chr4 7811777 7812085 -176476577 - AluSx SINE Alu -4 308 1 3321 168 114 26 chr4 7812085 7812706 -176475956 - L1MCa LINE L1 -4084 2342 1777 1923 148 0 0 chr4 7812706 7812997 -176475665 - AluSx SINE Alu -21 291 1 3321 168 114 26 chr4 7812997 7813269 -176475393 - L1MCa LINE L1 -4649 1777 1530 1487 204 42 0 chr4 7813269 7813553 -176475109 - AluJb SINE Alu -16 296 1 3321 168 114 26 chr4 7813553 7813985 -176474677 - L1MCa LINE L1 -4896 1530 777 883 212 93 0 chr4 7813989 7814215 -176474447 - L1MCa LINE L1 -6173 253 7 243 311 100 0 chr4 7816176 7816266 -176472396 - MIR SINE MIR -115 147 49 473 306 47 58 chr4 7816545 7816888 -176471774 + L2 LINE L2 2932 3270 -2 2057 117 10 0 chr4 7818153 7818443 -176470219 + AluSx SINE Alu 1 293 -19 547 205 18 0 chr4 7818632 7818744 -176469918 - MER81 DNA DNA 0 114 1 192 194 113 32 chr4 7820116 7820178 -176468484 + MIR SINE MIR 34 100 -108 502 337 150 13 chr4 7820574 7821186 -176467476 + L1ME4a LINE L1 5301 5996 -125 2098 110 0 25 chr4 7821579 7821898 -176466764 - AluSx SINE Alu -1 311 1 264 363 137 0 chr4 7822739 7822929 -176465733 - MIR SINE MIR 0 262 47 356 278 189 22 chr4 7823603 7823772 -176464890 - MIR SINE MIR -26 236 34 2207 79 3 55 chr4 7823772 7824102 -176464560 - AluSq SINE Alu 0 313 1 210 154 0 0 chr4 7824770 7824809 -176463853 + A-rich Low_complexity Low_complexity 1 39 0 2011 132 3 16 chr4 7824927 7825237 -176463425 + AluSx SINE Alu 1 306 -6 237 65 0 0 chr4 7826461 7826492 -176462170 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 243 275 154 0 chr4 7826910 7827001 -176461661 + L2 LINE L2 3168 3272 0 183 343 14 0 chr4 7827001 7827071 -176461591 - MIR SINE MIR -129 133 63 472 243 69 23 chr4 7827762 7827935 -176460727 + L1MB7 LINE L1 5943 6123 -61 250 254 34 68 chr4 7829753 7829871 -176458791 + L2 LINE L2 3158 3271 -1 618 236 23 23 chr4 7830201 7830375 -176458287 + MLT1H LTR MaLR 1 174 -375 585 176 17 17 chr4 7830490 7830609 -176458053 + MLT1H LTR MaLR 431 549 0 3574 139 13 8 chr4 7830773 7831372 -176457290 + LTR10E LTR ERV1 1 602 -31 659 245 13 0 chr4 7831546 7831701 -176456961 - MIR SINE MIR -95 167 11 868 234 92 77 chr4 7833519 7833844 -176454818 - MER102a DNA MER1_type 0 330 1 369 351 48 0 chr4 7834093 7834258 -176454404 + MIR SINE MIR 20 192 -70 290 333 25 44 chr4 7834312 7834516 -176454146 + L3 LINE CR1 1272 1471 -106 2115 103 17 0 chr4 7835427 7835718 -176452944 + AluSx SINE Alu 1 296 -16 213 319 138 11 chr4 7837782 7837970 -176450692 + MIR SINE MIR 36 247 -15 390 279 41 7 chr4 7838368 7838515 -176450147 - L2 LINE L2 0 3272 3121 405 291 159 28 chr4 7839040 7839360 -176449302 + L2 LINE L2 2259 2620 -694 542 284 157 25 chr4 7839400 7839794 -176448868 + L2 LINE L2 2804 3249 -64 1945 144 0 38 chr4 7841112 7841432 -176447230 - AluSx SINE Alu -4 308 1 1968 144 0 13 chr4 7842029 7842334 -176446328 + AluJb SINE Alu 1 301 -11 3087 102 61 5 chr4 7844494 7844934 -176443728 + MER4C LTR ERV1 1 465 0 1818 87 30 26 chr4 7845394 7845660 -176443002 + AluSx SINE Alu 36 302 -10 222 274 38 29 chr4 7846221 7846325 -176442337 - MIR SINE MIR -23 185 75 1233 141 34 43 chr4 7847094 7847282 -176441380 + MER2 DNA MER2_type 2 189 -156 1894 176 71 0 chr4 7847282 7847606 -176441056 + MER7A DNA MER2_type 1 345 -1 1233 141 34 43 chr4 7847606 7847651 -176441011 + MER2 DNA MER2_type 189 233 -112 705 119 0 0 chr4 7847655 7847756 -176440906 + AluSg/x SINE Alu 204 304 -6 665 167 0 18 chr4 7847756 7847870 -176440792 + MER2 DNA MER2_type 234 345 0 301 241 138 0 chr4 7848280 7848367 -176440295 - L2 LINE L2 -8 3264 3166 1892 119 10 42 chr4 7848458 7848769 -176439893 + AluSx SINE Alu 1 301 -11 1235 129 0 0 chr4 7848769 7848947 -176439715 + AluSg/x SINE Alu 134 311 -1 470 265 54 58 chr4 7848952 7849246 -176439416 + L1MC5 LINE L1 7238 7530 -431 1754 182 6 88 chr4 7849248 7849662 -176439000 + L1MB3 LINE L1 5744 6190 7 2252 99 0 7 chr4 7849662 7849964 -176438698 + AluSq SINE Alu 1 300 -13 1754 182 6 88 chr4 7849964 7849994 -176438668 + L1MB3 LINE L1 6190 6150 -33 383 67 34 157 chr4 7849994 7850083 -176438579 + MADE1 DNA Mariner 2 79 -1 1754 182 6 88 chr4 7850083 7850114 -176438548 + L1MB3 LINE L1 6149 6181 -2 441 251 23 69 chr4 7850114 7850289 -176438373 + L1MC5 LINE L1 7533 7699 -262 216 239 0 0 chr4 7850997 7851043 -176437619 + (CCG)n Simple_repeat Simple_repeat 2 47 0 568 195 86 29 chr4 7851121 7851295 -176437367 - MER96B DNA MER1_type? -233 184 1 804 249 66 8 chr4 7852962 7853203 -176435459 + MER112 DNA MER1_type 2 256 0 972 203 30 5 chr4 7853406 7853608 -176435054 - MIR SINE MIR -42 220 14 316 311 142 16 chr4 7854809 7854999 -176433663 - MIR SINE MIR -48 214 1 360 360 27 0 chr4 7855536 7855686 -176432976 + MIR SINE MIR 48 201 -61 1046 253 88 10 chr4 7856014 7856442 -176432220 + MLT1D LTR MaLR 3 505 0 2265 75 7 0 chr4 7856538 7856833 -176431829 - AluSp SINE Alu -16 297 1 282 268 10 21 chr4 7856833 7856930 -176431732 + MIR SINE MIR 167 262 0 213 275 43 0 chr4 7857213 7857282 -176431380 + MIR SINE MIR 101 172 -90 1822 168 29 9 chr4 7857672 7858018 -176430644 + MLT1B LTR MaLR 1 353 -37 846 147 8 0 chr4 7858023 7858152 -176430510 + MER6A DNA MER2_type 32 161 -444 765 273 84 12 chr4 7858168 7858490 -176430172 - MLT1D LTR MaLR -76 429 85 * 2067 115 81 56 chr4 7858469 7858799 -176429863 + MER6A DNA MER2_type 188 531 -334 2058 147 0 0 chr4 7858799 7859111 -176429551 + AluSx SINE Alu 1 312 0 2067 115 81 56 chr4 7859111 7859188 -176429474 + MER6A DNA MER2_type 531 605 0 714 269 145 31 chr4 7859652 7859930 -176428732 - LTR33A LTR ERVL -18 505 260 1411 281 36 25 chr4 7859930 7860368 -176428294 + LTR47B LTR ERVL 1 443 0 714 269 145 31 chr4 7860368 7860538 -176428124 - LTR33A LTR ERVL -263 260 6 449 322 39 30 chr4 7861468 7861667 -176426995 - MIR SINE MIR -54 208 9 2914 212 66 29 chr4 7862133 7862817 -176425845 + MER67C LTR ERV1 2 710 0 567 297 128 0 chr4 7862902 7863097 -176425565 + MIR SINE MIR 21 240 -22 284 333 0 0 chr4 7864552 7864633 -176424029 - MER81 DNA DNA -16 98 18 286 298 53 0 chr4 7867815 7867909 -176420753 - L2 LINE L2 -1 3312 3214 269 279 0 0 chr4 7868786 7868865 -176419797 + A-rich Low_complexity Low_complexity 1 79 0 1482 116 36 18 chr4 7869291 7869515 -176419147 - MER30 DNA MER1_type 0 230 3 425 313 55 0 chr4 7869869 7869997 -176418665 - MIR3 SINE MIR -6 202 68 220 277 189 14 chr4 7871117 7871265 -176417397 - L3 LINE CR1 -216 1361 1188 227 289 132 26 chr4 7871423 7871537 -176417125 - L2 LINE L2 -4 3268 3143 367 244 0 0 chr4 7871669 7871751 -176416911 + MIR SINE MIR 73 154 -108 628 314 51 8 chr4 7872378 7872633 -176416029 - L1ME3 LINE L1 -1 6161 5896 425 168 179 0 chr4 7872875 7872970 -176415692 - MER81 DNA DNA -1 113 2 694 257 38 16 chr4 7873319 7873502 -176415160 - MER5A DNA MER1_type 0 189 3 1910 103 57 0 chr4 7873683 7873965 -176414697 + AluSx SINE Alu 1 298 -14 290 181 14 14 chr4 7874027 7874099 -176414563 - L2 LINE L2 -277 2995 2924 195 270 79 0 chr4 7874182 7874245 -176414417 - L2 LINE L2 -556 2758 2691 347 288 183 0 chr4 7874302 7874455 -176414207 + MIR SINE MIR 79 259 -3 198 368 11 0 chr4 7874596 7874683 -176413979 + MIR SINE MIR 51 138 -124 478 238 13 64 chr4 7874884 7875070 -176413592 + MIR SINE MIR 5 181 -67 187 244 0 0 chr4 7875071 7875112 -176413550 - L2 LINE L2 -5 3267 3227 444 51 0 0 chr4 7875182 7875241 -176413421 + (CAAAA)n Simple_repeat Simple_repeat 4 62 0 538 304 134 5 chr4 7876004 7876221 -176412441 - MIR SINE MIR 0 262 18 738 278 52 0 chr4 7876727 7876921 -176411741 - MIR SINE MIR -51 211 8 1689 170 46 51 chr4 7876983 7877056 -176411606 + MLT2D LTR ERVL 3 75 -339 1926 129 4 0 chr4 7877056 7877356 -176411306 + AluSx SINE Alu 5 305 0 1689 170 46 51 chr4 7877356 7877675 -176410987 + MLT2D LTR ERVL 75 394 -20 531 249 103 12 chr4 7877742 7877907 -176410755 + MIR SINE MIR 73 252 -10 452 327 12 6 chr4 7883785 7883950 -176404712 - MIR3 SINE MIR -39 169 4 190 361 83 8 chr4 7884116 7884249 -176404413 - MIR SINE MIR -7 255 113 303 333 49 24 chr4 7884388 7884511 -176404151 + L2 LINE L2 3145 3270 -2 442 312 91 15 chr4 7885085 7885284 -176403378 - MIR SINE MIR -33 229 16 473 306 47 58 chr4 7886515 7886858 -176401804 + L2 LINE L2 2932 3270 -2 2057 117 10 0 chr4 7888123 7888413 -176400249 + AluSx SINE Alu 1 293 -19 547 205 18 0 chr4 7888602 7888714 -176399948 - MER81 DNA DNA 0 114 1 213 177 113 32 chr4 7890086 7890148 -176398514 + MIR SINE MIR 34 100 -108 498 337 150 13 chr4 7890544 7891156 -176397506 + L1ME4a LINE L1 5301 5996 -125 2098 110 0 25 chr4 7891549 7891868 -176396794 - AluSx SINE Alu -1 311 1 264 363 137 0 chr4 7892709 7892899 -176395763 - MIR SINE MIR 0 262 47 356 278 189 22 chr4 7893573 7893742 -176394920 - MIR SINE MIR -26 236 34 2207 79 3 55 chr4 7893742 7894072 -176394590 - AluSq SINE Alu 0 313 1 210 154 0 0 chr4 7894740 7894779 -176393883 + A-rich Low_complexity Low_complexity 1 39 0 2011 132 3 16 chr4 7894897 7895207 -176393455 + AluSx SINE Alu 1 306 -6 237 65 0 0 chr4 7896431 7896462 -176392200 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 243 275 154 0 chr4 7896880 7896971 -176391691 + L2 LINE L2 3168 3272 0 183 343 14 0 chr4 7896971 7897041 -176391621 - MIR SINE MIR -129 133 63 472 243 69 23 chr4 7897732 7897905 -176390757 + L1MB7 LINE L1 5943 6123 -61 250 254 34 68 chr4 7899723 7899841 -176388821 + L2 LINE L2 3158 3271 -1 618 236 23 23 chr4 7900171 7900345 -176388317 + MLT1H LTR MaLR 1 174 -375 585 176 17 17 chr4 7900460 7900579 -176388083 + MLT1H LTR MaLR 431 549 0 3574 139 13 8 chr4 7900743 7901342 -176387320 + LTR10E LTR ERV1 1 602 -31 659 245 13 0 chr4 7901516 7901671 -176386991 - MIR SINE MIR -95 167 11 868 234 92 77 chr4 7903489 7903814 -176384848 - MER102a DNA MER1_type 0 330 1 369 351 48 0 chr4 7904063 7904228 -176384434 + MIR SINE MIR 20 192 -70 290 333 25 44 chr4 7904282 7904486 -176384176 + L3 LINE CR1 1272 1471 -106 2115 103 17 0 chr4 7905397 7905688 -176382974 + AluSx SINE Alu 1 296 -16 206 296 100 37 chr4 7907710 7907940 -176380722 + MIR SINE MIR 2 247 -15 401 247 71 13 chr4 7908338 7908492 -176380170 - L2 LINE L2 0 3272 3110 418 281 163 31 chr4 7909010 7909330 -176379332 + L2 LINE L2 2259 2620 -694 547 264 170 38 chr4 7909370 7909764 -176378898 + L2 LINE L2 2804 3249 -64 2082 134 0 47 chr4 7911082 7911402 -176377260 - AluSx SINE Alu -7 305 1 2095 142 0 13 chr4 7911999 7912302 -176376360 + AluJb SINE Alu 1 299 -13 3015 102 61 5 chr4 7914464 7914904 -176373758 + MER4C LTR ERV1 1 465 0 1930 87 30 26 chr4 7915364 7915630 -176373032 + AluSx SINE Alu 36 302 -10 234 274 38 29 chr4 7916191 7916295 -176372367 - MIR SINE MIR -23 185 75 1258 142 34 39 chr4 7917064 7917251 -176371411 + MER2 DNA MER2_type 2 189 -156 1836 176 71 0 chr4 7917251 7917575 -176371087 + MER7A DNA MER2_type 1 345 -1 1258 142 34 39 chr4 7917575 7917620 -176371042 + MER2 DNA MER2_type 189 233 -112 701 119 0 0 chr4 7917624 7917725 -176370937 + AluSg/x SINE Alu 204 304 -6 658 167 0 18 chr4 7917725 7917839 -176370823 + MER2 DNA MER2_type 234 345 0 317 241 138 0 chr4 7918249 7918336 -176370326 - L2 LINE L2 -8 3264 3166 2318 110 3 16 chr4 7918427 7918744 -176369918 + AluSq SINE Alu 1 313 0 267 333 86 17 chr4 7918841 7919015 -176369647 + MIR SINE MIR 7 192 -70 2127 116 36 39 chr4 7919186 7919548 -176369114 - MER46B DNA MER2_type 0 236 1 1883 196 50 33 chr4 7919619 7920010 -176368652 + MLT1C LTR MaLR 1 403 -64 2116 138 13 3 chr4 7920010 7920315 -176368347 - AluJo SINE Alu -4 308 1 1883 196 50 33 chr4 7920315 7920382 -176368280 + MLT1C LTR MaLR 403 467 0 345 220 122 114 chr4 7920462 7920645 -176368017 + Charlie8 DNA MER1_type 244 431 -1986 1677 116 0 0 chr4 7920645 7920869 -176367793 + AluSg/x SINE Alu 80 303 -7 345 220 122 114 chr4 7920869 7920930 -176367732 + Charlie8 DNA MER1_type 431 490 -1927 591 175 0 0 chr4 7921792 7921912 -176366750 + (TGGA)n Simple_repeat Simple_repeat 3 122 0 204 67 0 0 chr4 7922331 7922361 -176366301 + (CCAA)n Simple_repeat Simple_repeat 2 31 0 2055 128 60 31 chr4 7922974 7923327 -176365335 + THE1B LTR MaLR 1 363 -1 306 0 0 0 chr4 7923518 7923552 -176365110 + (CA)n Simple_repeat Simple_repeat 2 35 0 361 292 83 8 chr4 7923810 7923930 -176364732 - MIR SINE MIR -55 207 79 405 264 104 0 chr4 7924425 7924531 -176364131 + MIR SINE MIR 74 190 -72 1648 172 15 7 chr4 7925056 7925329 -176363333 - AluJb SINE Alu -27 285 11 532 247 25 15 chr4 7925339 7925515 -176363147 + L1MC4a LINE L1 5723 5801 -383 2434 91 0 0 chr4 7925659 7925957 -176362705 + AluSx SINE Alu 1 298 -14 2288 112 3 3 chr4 7926574 7926879 -176361783 + AluSp SINE Alu 1 305 -8 259 277 33 97 chr4 7926896 7927196 -176361466 - L1ME4a LINE L1 -205 5916 5636 252 0 0 0 chr4 7927505 7927533 -176361129 + (A)n Simple_repeat Simple_repeat 1 28 0 183 80 0 0 chr4 7927837 7927862 -176360800 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 269 316 159 20 chr4 7928490 7929051 -176359611 + L2 LINE L2 1762 2400 -914 1366 242 92 9 chr4 7929199 7929624 -176359038 + MLT1C LTR MaLR 8 467 0 380 327 39 54 chr4 7929782 7929987 -176358675 + MIR SINE MIR 51 252 -10 360 243 96 96 chr4 7930630 7930869 -176357793 - L2 LINE L2 -1 3312 3074 563 246 106 80 chr4 7931483 7931881 -176356781 + MLT1K LTR MaLR 169 576 -12 244 255 134 33 chr4 7931981 7932144 -176356518 - MIR3 SINE MIR -69 193 15 1477 206 73 42 chr4 7932323 7932496 -176356166 + MLT1C LTR MaLR 1 167 -300 2220 112 0 0 chr4 7932496 7932783 -176355879 + AluSx SINE Alu 19 305 -7 1477 206 73 42 chr4 7932783 7933060 -176355602 + MLT1C LTR MaLR 167 465 -2 412 265 90 50 chr4 7933982 7934182 -176354480 - MIR SINE MIR -49 213 6 244 365 47 31 chr4 7934388 7934580 -176354082 - L3 LINE CR1 -21 1556 1362 199 333 171 0 chr4 7935593 7935710 -176352952 + L2 LINE L2 2906 3042 -230 1917 149 40 7 chr4 7937249 7937551 -176351111 + AluJb SINE Alu 1 312 0 308 172 20 30 chr4 7937555 7937654 -176351008 + GA-rich Low_complexity Low_complexity 3 100 0 625 176 12 24 chr4 7937682 7937852 -176350810 + GA-rich Low_complexity Low_complexity 3 170 0 339 130 0 0 chr4 7937871 7937925 -176350737 + (GGAA)n Simple_repeat Simple_repeat 3 56 0 293 303 20 0 chr4 7938210 7938309 -176350353 - L1ME LINE L1 -430 5691 5591 642 289 77 37 chr4 7938325 7938674 -176349988 - L2 LINE L2 -26 3287 2925 264 325 95 5 chr4 7938746 7938946 -176349716 - L1ME LINE L1 -2336 5472 5255 2412 94 73 52 chr4 7939222 7939546 -176349116 - Tigger4(Zombi) DNA MER2_type 0 2731 2394 1577 204 18 0 chr4 7939546 7939830 -176348832 - AluJo SINE Alu -19 293 5 2412 94 73 52 chr4 7939830 7939932 -176348730 - Tigger4(Zombi) DNA MER2_type -337 2394 2296 1273 158 54 4 chr4 7939933 7940174 -176348488 - Tigger4(Zombi) DNA MER2_type -2477 254 2 2214 113 0 7 chr4 7940687 7940980 -176347682 + AluSq SINE Alu 2 292 -21 207 139 0 0 chr4 7940980 7941016 -176347646 + (GGGA)n Simple_repeat Simple_repeat 1 36 0 * 1121 95 17 20 chr4 7941010 7941306 -176347356 + (GAAA)n Simple_repeat Simple_repeat 1 296 0 669 260 65 29 chr4 7941323 7941600 -176347062 - L1ME3 LINE L1 -133 6098 5812 1040 291 68 50 chr4 7941652 7942406 -176346256 - L1ME3 LINE L1 -4064 2332 1566 287 241 23 0 chr4 7942431 7942518 -176346144 - L1ME LINE L1 -649 5590 5502 4691 261 82 29 chr4 7942660 7943777 -176344885 - L1MB7 LINE L1 -75 6109 5052 185 0 40 0 chr4 7943777 7943802 -176344860 + (TG)n Simple_repeat Simple_repeat 2 27 0 4691 261 82 29 chr4 7943802 7944122 -176344540 - L1MB7 LINE L1 -1132 5052 4750 2224 99 6 51 chr4 7944122 7944435 -176344227 + AluSx SINE Alu 1 299 -13 4691 261 82 29 chr4 7944435 7944796 -176343866 - L1MB7 LINE L1 -1434 4750 4409 1515 196 58 52 chr4 7944796 7945159 -176343503 + MLT1A1 LTR MaLR 1 365 0 4691 261 82 29 chr4 7945159 7945236 -176343426 - L1MB7 LINE L1 -1775 4409 4338 2295 70 0 0 chr4 7945236 7945508 -176343154 - AluY SINE Alu -1 310 39 185 0 40 0 chr4 7945514 7945539 -176343123 + (TTTTA)n Simple_repeat Simple_repeat 5 30 0 4691 261 82 29 chr4 7945539 7946648 -176342014 - L1MB7 LINE L1 -1850 4334 2957 1133 266 115 9 chr4 7946682 7947133 -176341529 - L1MB7 LINE L1 -3464 2682 2184 202 286 0 0 chr4 7947863 7947912 -176340750 + L2 LINE L2 3239 3287 -26 341 93 19 0 chr4 7949032 7949086 -176339576 + (TC)n Simple_repeat Simple_repeat 1 55 0 2101 156 9 69 chr4 7949893 7950328 -176338334 + MLT2D LTR ERVL 1 409 -5 232 287 23 23 chr4 7950331 7950418 -176338244 + MIR SINE MIR 106 192 -70 2443 173 34 30 chr4 7951193 7951640 -176337022 + L1MC3 LINE L1 6363 6814 -971 2470 73 0 3 chr4 7951640 7951941 -176336721 - AluY SINE Alu -4 307 8 2443 173 34 30 chr4 7951941 7951997 -176336665 + L1MC3 LINE L1 6814 6868 -917 1900 169 67 3 chr4 7952621 7952982 -176335680 + MLT1B LTR MaLR 7 390 0 234 274 38 28 chr4 7952982 7953088 -176335574 + MIR3 SINE MIR 91 197 -11 415 276 72 17 chr4 7953148 7953329 -176335333 - MIR SINE MIR -32 230 40 205 67 0 111 chr4 7953390 7953435 -176335227 + (CCCCAG)n Simple_repeat Simple_repeat 3 42 0 379 312 26 69 chr4 7953984 7954215 -176334447 - MIR SINE MIR -32 230 10 1124 118 0 12 chr4 7954429 7954598 -176334064 + MER4B LTR ERV1 3 169 -441 730 272 170 8 chr4 7954614 7954978 -176333684 + MER57B LTR ERV1 12 434 0 273 301 48 10 chr4 7954978 7955081 -176333581 - MIR SINE MIR -115 147 41 343 181 371 9 chr4 7955659 7955775 -176332887 - MER5A DNA MER1_type -22 167 10 303 278 81 40 chr4 7955839 7956012 -176332650 - MER5A DNA MER1_type -3 186 7 351 228 76 0 chr4 7956048 7956140 -176332522 - MIR SINE MIR -91 171 73 377 312 40 29 chr4 7956278 7956451 -176332211 + L2 LINE L2 3139 3313 0 466 344 36 0 chr4 7956471 7956663 -176331999 - MIR SINE MIR -10 252 54 338 312 160 8 chr4 7956655 7956918 -176331744 - L2 LINE L2 -1121 2193 1891 * 2159 111 33 13 chr4 7957642 7957948 -176330714 + AluSx SINE Alu 1 312 0 272 242 100 25 chr4 7958001 7958121 -176330541 - L2 LINE L2 -1 3271 3143 182 311 97 10 chr4 7959248 7959351 -176329311 - L2 LINE L2 -85 3228 3117 857 176 35 0 chr4 7959459 7959629 -176329033 - MER45A DNA AcHobo 0 178 3 8744 40 2 7 chr4 7959721 7960797 -176327865 - MER11C LTR ERVK 0 1071 1 753 287 163 23 chr4 7961305 7961748 -176326914 + MLT1D LTR MaLR 1 505 0 2343 82 6 19 chr4 7961777 7962094 -176326568 + AluSp SINE Alu 1 313 0 299 327 8 9 chr4 7962302 7962423 -176326239 - MIR SINE MIR -70 138 30 341 317 35 64 chr4 7962817 7963019 -176325643 + L1ME LINE L1 5592 5787 -334 206 330 32 0 chr4 7963336 7963430 -176325232 + MIR SINE MIR 154 250 -12 2331 109 3 0 chr4 7963436 7963738 -176324924 + AluSx SINE Alu 1 303 -9 236 175 0 0 chr4 7963989 7964029 -176324633 + L1ME LINE L1 5725 5764 -357 496 281 36 12 chr4 7964243 7964410 -176324252 - Charlie8 DNA MER1_type -2246 171 1 218 197 15 45 chr4 7964472 7964538 -176324124 + (TATATG)n Simple_repeat Simple_repeat 5 68 0 1954 127 67 0 chr4 7964583 7964866 -176323796 + AluSx SINE Alu 1 302 -10 939 251 8 16 chr4 7965288 7965531 -176323131 + MIR SINE MIR 21 261 -1 1806 170 3 13 chr4 7966059 7966365 -176322297 + AluJo SINE Alu 1 303 -9 208 293 0 0 chr4 7966570 7966628 -176322034 + MIR SINE MIR 19 76 -132 240 196 92 2 chr4 7967477 7967554 -176321108 - MIR SINE MIR -63 145 63 203 204 37 0 chr4 7968056 7968110 -176320552 + (CA)n Simple_repeat Simple_repeat 2 57 0 327 365 30 30 chr4 7968214 7968414 -176320248 - L1MCa LINE L1 -4317 2290 2091 518 296 70 58 chr4 7968424 7969227 -176319435 - L1MCa LINE L1 -4573 2034 1024 270 277 8 40 chr4 7969275 7969435 -176319227 + C-rich Low_complexity Low_complexity 1 154 0 221 278 8 48 chr4 7969625 7969751 -176318911 + CT-rich Low_complexity Low_complexity 2 122 0 2492 68 0 34 chr4 7970019 7970341 -176318321 - AluY SINE Alu 0 311 1 1683 137 91 4 chr4 7970716 7970979 -176317683 + AluJb SINE Alu 1 286 -26 2554 86 0 3 chr4 7971335 7971648 -176317014 - AluSx SINE Alu 0 312 1 263 254 160 41 chr4 7971859 7972028 -176316634 + MIR3 SINE MIR 3 191 -17 209 253 209 0 chr4 7972323 7972414 -176316248 - MIR SINE MIR -63 145 36 196 330 70 51 chr4 7973214 7973487 -176315175 + L2 LINE L2 2994 3271 -1 289 234 70 16 chr4 7973529 7973657 -176315005 - MIR3 SINE MIR -71 137 3 259 303 65 45 chr4 7973913 7974068 -176314594 - MIR3 SINE MIR -37 171 14 2450 75 7 0 chr4 7974202 7974496 -176314166 + AluSc SINE Alu 1 296 -13 255 276 20 51 chr4 7976793 7976891 -176311771 + MIR SINE MIR 160 254 -8 411 380 22 11 chr4 7977384 7977568 -176311094 - MIR SINE MIR -70 192 7 259 330 43 27 chr4 7977820 7978005 -176310657 - L2 LINE L2 -221 3051 2864 370 336 0 15 chr4 7978204 7978341 -176310321 - L2 LINE L2 -189 3083 2949 303 297 55 21 chr4 7979285 7979430 -176309232 + L1ME LINE L1 5592 5741 -380 2285 108 10 3 chr4 7979557 7979864 -176308798 + AluSc SINE Alu 1 309 0 457 311 79 6 chr4 7980064 7980241 -176308421 - MIR SINE MIR -63 199 10 228 313 15 0 chr4 7980623 7980690 -176307972 + L2 LINE L2 3201 3268 -4 866 264 35 9 chr4 7981202 7981429 -176307233 + MIR SINE MIR 27 259 -3 266 273 13 0 chr4 7981430 7981507 -176307155 + MER116 DNA Mariner 2 79 -1 1362 126 0 0 chr4 7981528 7981710 -176306952 - AluSx SINE Alu -19 293 112 940 81 0 0 chr4 7981865 7981976 -176306686 - AluSx SINE Alu -190 123 13 185 384 73 33 chr4 7982984 7983135 -176305527 + MIR SINE MIR 106 262 0 1092 176 39 5 chr4 7983745 7983950 -176304712 + MER20 DNA MER1_type 1 212 -7 209 354 135 25 chr4 7984134 7984453 -176304209 - L2 LINE L2 -1 3271 2918 360 206 63 48 chr4 7984871 7984997 -176303665 - L1MD3 LINE L1 -15 7980 7853 3287 169 29 23 chr4 7985409 7986111 -176302551 - L1MB3 LINE L1 0 6183 5478 1107 261 41 0 chr4 7986139 7986407 -176302255 - MLT1A1 LTR MaLR -4 361 83 198 0 0 0 chr4 7986546 7986568 -176302094 + (AGCTG)n Simple_repeat Simple_repeat 3 24 0 1011 173 108 124 chr4 7986875 7987122 -176301540 - MLT1A1 LTR MaLR 0 365 124 2051 157 13 0 chr4 7987122 7987428 -176301234 - AluJo SINE Alu 0 312 3 1011 173 108 124 chr4 7987428 7987551 -176301111 - MLT1A1 LTR MaLR -241 124 1 232 343 112 12 chr4 7987574 7987825 -176300837 + L2 LINE L2 2970 3245 -27 198 0 0 0 chr4 7987835 7987857 -176300805 + (TGAA)n Simple_repeat Simple_repeat 1 22 0 396 287 115 6 chr4 7988536 7988710 -176299952 + MIR SINE MIR 70 262 0 203 226 113 0 chr4 7989258 7989311 -176299351 - L2 LINE L2 -40 3232 3174 677 248 26 9 chr4 7989311 7989527 -176299135 + MIR SINE MIR 14 235 -27 194 230 40 27 chr4 7990300 7990374 -176298288 - L2 LINE L2 -8 3264 3190 1170 121 11 0 chr4 7990503 7990677 -176297985 - THE1C LTR MaLR 0 375 200 1067 101 0 0 chr4 7990834 7990982 -176297680 - THE1C LTR MaLR -226 149 2 1803 91 0 13 chr4 7991450 7991701 -176296961 + AluSx SINE Alu 58 305 0 304 116 0 163 chr4 7991706 7991741 -176296921 - L1ME4a LINE L1 -1 6120 6105 2219 128 0 0 chr4 7991741 7992045 -176296617 + AluSx SINE Alu 1 304 -8 304 116 0 163 chr4 7992045 7992095 -176296567 - L1ME4a LINE L1 -16 6105 6049 255 250 18 36 chr4 7992172 7992284 -176296378 + (TCTA)n Simple_repeat Simple_repeat 4 113 0 192 163 0 0 chr4 7992286 7992329 -176296333 + GA-rich Low_complexity Low_complexity 2 44 0 234 293 13 0 chr4 7992376 7992451 -176296211 - L1ME4a LINE L1 -258 5863 5788 640 122 0 0 chr4 7992489 7992601 -176296061 - AluSx SINE Alu 0 305 194 1111 106 0 0 chr4 7992602 7992743 -176295919 - AluSx SINE Alu -172 141 1 278 349 108 5 chr4 7992927 7993122 -176295540 + MIR SINE MIR 14 228 -34 193 254 15 30 chr4 7993720 7993787 -176294875 + MIR SINE MIR 81 146 -62 185 324 45 18 chr4 7994195 7994306 -176294356 - MIR3 SINE MIR -92 116 3 364 296 113 31 chr4 7994414 7994573 -176294089 + MIR3 SINE MIR 15 186 -22 2123 120 0 7 chr4 7994764 7995055 -176293607 - AluJb SINE Alu -23 289 1 291 256 26 13 chr4 7995093 7995201 -176293461 + MIR SINE MIR 38 140 -68 228 258 16 16 chr4 7995716 7995778 -176292884 + L2 LINE L2 3191 3252 -20 254 289 72 0 chr4 7996509 7996592 -176292070 + MIR SINE MIR 32 120 -142 181 282 100 27 chr4 7997158 7997268 -176291394 - MIR SINE MIR -68 140 23 469 276 73 55 chr4 7997621 7997718 -176290944 + L1MC4 LINE L1 7685 7779 -263 273 57 0 0 chr4 7997718 7997753 -176290909 + (TATG)n Simple_repeat Simple_repeat 2 36 0 1574 124 128 23 chr4 7997753 7998011 -176290651 - AluSx SINE Alu -27 285 1 469 276 73 55 chr4 7998011 7998256 -176290406 + L1MC4 LINE L1 7778 8034 -8 194 250 62 0 chr4 7998778 7998842 -176289820 + L2 LINE L2 2994 3061 -211 524 168 0 9 chr4 8000325 8000432 -176288230 + (TGG)n Simple_repeat Simple_repeat 1 106 0 648 109 79 0 chr4 8000539 8000675 -176287987 + AluSg/x SINE Alu 171 314 0 230 236 18 0 chr4 8000676 8000731 -176287931 + L1ME4a LINE L1 5607 5662 -459 180 77 0 0 chr4 8000983 8001009 -176287653 + (TATG)n Simple_repeat Simple_repeat 3 28 0 332 324 91 17 chr4 8001161 8001337 -176287325 + L1ME4a LINE L1 5930 6118 -3 1942 127 0 39 chr4 8001490 8001807 -176286855 - AluSx SINE Alu 0 316 11 934 192 315 45 chr4 8001960 8002335 -176286327 - L1MD2 LINE L1 -22 6337 5862 224 366 142 6 chr4 8002524 8002707 -176285955 - MIR SINE MIR -17 245 38 341 293 34 27 chr4 8002723 8002870 -176285792 - MIR3 SINE MIR -58 150 3 507 254 154 29 chr4 8002920 8003041 -176285621 + MIR SINE MIR 4 109 -153 2264 115 7 0 chr4 8003041 8003345 -176285317 - AluSx SINE Alu -6 306 1 507 254 154 29 chr4 8003345 8003455 -176285207 + MIR SINE MIR 109 262 0 293 239 99 0 chr4 8003477 8003548 -176285114 + MIR SINE MIR 31 108 -154 1915 157 40 0 chr4 8003577 8003877 -176284785 + AluJb SINE Alu 1 312 0 397 318 163 25 chr4 8004343 8004472 -176284190 + L2 LINE L2 2920 3030 -242 1490 189 9 60 chr4 8004472 8004790 -176283872 - AluJo SINE Alu -10 302 1 397 318 163 25 chr4 8004790 8004937 -176283725 + L2 LINE L2 3030 3234 -38 1045 216 110 49 chr4 8005301 8005709 -176282953 + MLT1C LTR MaLR 25 463 -4 442 290 97 5 chr4 8005716 8005902 -176282760 - MIR SINE MIR -57 205 3 259 207 52 0 chr4 8006001 8006059 -176282603 - L3 LINE CR1 -182 1395 1335 376 269 19 0 chr4 8006308 8006416 -176282246 + MER69 DNA AcHobo 64 173 -1053 * 1909 163 67 0 chr4 8006412 8006768 -176281894 - MLT1B LTR MaLR -10 380 1 567 259 56 16 chr4 8006769 8007066 -176281596 + MER69 DNA AcHobo 166 528 -1998 184 265 60 99 chr4 8007152 8007303 -176281359 + MER5A DNA MER1_type 38 182 -7 1327 229 81 28 chr4 8007388 8007894 -176280768 + MER69 DNA AcHobo 1989 2521 -5 357 292 119 69 chr4 8007901 8008002 -176280660 + MLT1J LTR MaLR 16 111 -400 2234 128 0 0 chr4 8008002 8008299 -176280363 + AluSx SINE Alu 1 297 -15 357 292 119 69 chr4 8008299 8008660 -176280002 + MLT1J LTR MaLR 111 501 -10 1977 186 13 55 chr4 8008674 8009132 -176279530 - MLT1C LTR MaLR -23 444 6 801 254 118 16 chr4 8009397 8009712 -176278950 + MLT1I LTR MaLR 63 409 0 466 250 16 16 chr4 8009955 8010083 -176278579 + L2 LINE L2 3180 3307 -6 194 318 18 36 chr4 8010208 8010318 -176278344 + MIR SINE MIR 41 148 -114 194 0 39 0 chr4 8010636 8010662 -176278000 + (CGGGGG)n Simple_repeat Simple_repeat 3 29 0 188 289 0 0 chr4 8011787 8011839 -176276823 + L3 LINE CR1 1022 1073 -504 393 298 140 0 chr4 8011839 8012017 -176276645 + L3 LINE CR1 1333 1535 -42 392 231 196 7 chr4 8012529 8012672 -176275990 - MER5A DNA MER1_type -6 183 14 284 257 57 19 chr4 8012918 8013023 -176275639 + LTR16C LTR ERVL 353 461 -30 650 300 23 9 chr4 8013583 8013803 -176274859 + MIR SINE MIR 21 243 -19 1007 231 5 0 chr4 8013880 8014083 -176274579 - MER58A DNA MER1_type 0 224 21 410 303 130 35 chr4 8015691 8015975 -176272687 + L2 LINE L2 3003 3313 0 282 295 49 25 chr4 8016315 8016437 -176272225 + MIR SINE MIR 60 184 -78 250 214 60 86 chr4 8016464 8016581 -176272081 + L2 LINE L2 3016 3129 -143 247 166 33 44 chr4 8016633 8016814 -176271848 + (CA)n Simple_repeat Simple_repeat 2 180 0 194 191 43 21 chr4 8017489 8017536 -176271126 + MIR3 SINE MIR 114 161 -47 617 242 47 43 chr4 8017569 8017780 -176270882 - L1MB7 LINE L1 -14 6166 5953 448 243 96 0 chr4 8017887 8018064 -176270598 + MIR SINE MIR 50 243 -19 2215 207 48 95 chr4 8018257 8018948 -176269714 + L1MB8 LINE L1 5480 6136 -42 1657 180 25 3 chr4 8018948 8019266 -176269396 - AluJb SINE Alu 0 312 1 2215 207 48 95 chr4 8019266 8019308 -176269354 + L1MB8 LINE L1 6136 6178 0 234 305 195 0 chr4 8019991 8020109 -176268553 + L1ME LINE L1 5542 5682 -439 259 229 38 0 chr4 8021060 8021357 -176267305 + (CACCT)n Simple_repeat Simple_repeat 1 308 0 214 241 12 0 chr4 8021389 8021555 -176267107 + (CACCT)n Simple_repeat Simple_repeat 4 171 0 301 375 52 30 chr4 8021963 8022366 -176266296 - L2 LINE L2 -562 2752 2341 529 270 65 56 chr4 8022886 8023101 -176265561 - MIR SINE MIR -34 228 12 840 1206 2611 3672 chr4 8023394 8023428 -176265234 - MLT1D LTR MaLR 0 505 437 14081 127 47 8 chr4 8023428 8025553 -176263109 + Tigger1 DNA MER2_type 1 2227 -191 1838 103 38 75 chr4 8025553 8025873 -176262789 - AluSx SINE Alu 0 309 1 14081 127 47 8 chr4 8025873 8026073 -176262589 + Tigger1 DNA MER2_type 2227 2418 0 840 1206 2611 3672 chr4 8026073 8026483 -176262179 - MLT1D LTR MaLR -68 437 1 264 159 48 0 chr4 8027084 8027147 -176261515 + MIR SINE MIR 59 124 -138 326 322 34 27 chr4 8027238 8027384 -176261278 + MIR SINE MIR 116 262 0 531 242 48 0 chr4 8027754 8027878 -176260784 + MER45A DNA AcHobo 2 131 -47 3902 211 3 25 chr4 8028273 8028883 -176259779 + L1MB7 LINE L1 5352 5940 -244 1950 155 0 32 chr4 8028883 8029199 -176259463 + AluJb SINE Alu 1 306 -6 3902 211 3 25 chr4 8029199 8029439 -176259223 + L1MB7 LINE L1 5940 6184 0 1519 253 66 2 chr4 8029450 8029877 -176258785 + MLT1C LTR MaLR 6 459 -8 342 0 0 0 chr4 8029878 8029916 -176258746 + (TG)n Simple_repeat Simple_repeat 1 38 0 299 339 25 8 chr4 8030146 8030267 -176258395 + L2 LINE L2 3181 3303 -10 234 271 0 0 chr4 8031013 8031072 -176257590 + MIR SINE MIR 92 150 -112 181 274 68 14 chr4 8031970 8032043 -176256619 - MIR SINE MIR -73 135 59 627 282 35 10 chr4 8032189 8032391 -176256271 + MIR SINE MIR 44 250 -12 317 318 54 8 chr4 8032508 8032637 -176256025 - L2 LINE L2 -23 3249 3115 184 161 0 0 chr4 8033057 8033088 -176255574 + L2 LINE L2 3264 3294 -19 628 121 0 0 chr4 8033931 8034022 -176254640 - AluJb SINE Alu -23 289 199 443 74 0 158 chr4 8034123 8034218 -176254444 + MADE1 DNA Mariner 1 80 0 1200 223 57 38 chr4 8034906 8035273 -176253389 + MLT1A2 LTR MaLR 1 374 0 1360 146 10 5 chr4 8035289 8035511 -176253151 - AluJb SINE Alu 0 308 86 618 280 50 0 chr4 8035635 8035817 -176252845 + MIR SINE MIR 1 191 -71 789 200 87 20 chr4 8036002 8036197 -176252465 + MLT1J LTR MaLR 190 397 -114 509 268 153 10 chr4 8037243 8037452 -176251210 + MIR SINE MIR 24 262 0 349 255 10 31 chr4 8037589 8037687 -176250975 + MIR SINE MIR 97 192 -70 1510 200 31 7 chr4 8037764 8038054 -176250608 + AluJo SINE Alu 1 297 -15 212 330 29 19 chr4 8038123 8038226 -176250436 - MIR3 SINE MIR -14 194 91 330 272 57 40 chr4 8038416 8038714 -176249948 + L1M4 LINE L1 4744 5046 -1100 1422 272 50 75 chr4 8038995 8039542 -176249120 + L1MEd LINE L1 493 1012 -5193 649 222 0 0 chr4 8039542 8039694 -176248968 + FLAM_A SINE Alu 1 152 0 1422 272 50 75 chr4 8039694 8040014 -176248648 + L1MEd LINE L1 1012 1339 -4866 567 248 19 6 chr4 8040124 8040285 -176248377 + MER104 DNA Tc2 1 163 -17 228 217 24 24 chr4 8040310 8040393 -176248269 + HAL1 LINE L1 1490 1572 -935 1016 335 44 26 chr4 8040430 8041161 -176247501 + L1MEc LINE L1 107 850 -5546 348 231 23 95 chr4 8041155 8041376 -176247286 + L1MEc LINE L1 2838 3042 -3173 * 806 178 89 0 chr4 8041407 8041598 -176247064 - L1MB3 LINE L1 -143 6040 5833 362 296 86 39 chr4 8041755 8042162 -176246500 + L1MEd LINE L1 2093 2480 -3735 30 0 0 0 chr4 8043001 8043031 -176245631 + GC_rich Low_complexity Low_complexity 1 30 0 258 160 200 10 chr4 8044969 8045069 -176243593 + MIR SINE MIR 27 145 -117 323 281 144 14 chr4 8045157 8045303 -176243359 + MIR SINE MIR 24 188 -74 270 273 67 16 chr4 8045477 8045612 -176243050 + MIR SINE MIR 11 152 -56 2342 87 7 23 chr4 8045874 8046183 -176242479 - AluSq SINE Alu -9 304 1 244 111 0 0 chr4 8046515 8046551 -176242111 + MADE1 DNA Mariner 8 43 -37 763 220 48 0 chr4 8046820 8046988 -176241674 + MER58A DNA MER1_type 49 224 0 335 349 48 0 chr4 8047179 8047305 -176241357 - L1 LINE L1 -3309 2837 2706 542 193 16 0 chr4 8047326 8047464 -176241198 - L1MB4 LINE L1 -6 6177 6035 313 280 38 48 chr4 8047532 8047676 -176240986 + MIR SINE MIR 2 147 -62 1785 203 53 36 chr4 8048448 8048915 -176239747 - L1MB5 LINE L1 -6 6168 5694 193 386 47 0 chr4 8049182 8049309 -176239353 + L2 LINE L2 2882 3014 -258 2014 159 38 28 chr4 8049309 8049864 -176238798 - MLT2A2 LTR ERVL 0 554 1 326 256 195 46 chr4 8049866 8050128 -176238534 + L2 LINE L2 3013 3313 0 286 313 47 16 chr4 8050111 8050239 -176238423 + MIR SINE MIR 43 174 -88 * 987 195 56 53 chr4 8050420 8050522 -176238140 + MER33 DNA MER1_type 1 101 -2484 2334 88 0 0 chr4 8050522 8050841 -176237821 + AluSq SINE Alu 1 319 0 987 195 56 53 chr4 8050841 8051060 -176237602 + MER33 DNA MER1_type 101 324 0 343 237 4 24 chr4 8051120 8051221 -176237441 + MIR SINE MIR 61 162 -46 459 295 53 14 chr4 8052317 8052524 -176236138 + L1MA9 LINE L1 6041 6255 -57 464 274 79 70 chr4 8052881 8053209 -176235453 + L2 LINE L2 2928 3258 -14 191 261 67 60 chr4 8053221 8053355 -176235307 - L3 LINE CR1 -3 1574 1440 2653 217 18 36 chr4 8054800 8054990 -176233672 + L1MEc LINE L1 2140 2332 -3883 2151 154 25 3 chr4 8054990 8055347 -176233315 - MLT1A1 LTR MaLR 0 365 1 2653 217 18 36 chr4 8055347 8055625 -176233037 + L1MEc LINE L1 2332 2613 -3602 2017 159 0 7 chr4 8055625 8055927 -176232735 + AluJb SINE Alu 1 300 -12 2653 217 18 36 chr4 8055927 8056280 -176232382 + L1MEc LINE L1 2613 2905 -3310 607 253 27 32 chr4 8056974 8057095 -176231567 + MER5A DNA MER1_type 2 123 -66 2563 51 0 3 chr4 8057095 8057389 -176231273 - AluY SINE Alu -18 293 1 607 253 27 32 chr4 8057389 8057453 -176231209 + MER5A DNA MER1_type 123 186 -3 1892 226 72 53 chr4 8057477 8058020 -176230642 - MLT2B3 LTR ERVL 0 554 2 189 146 49 49 chr4 8058550 8058591 -176230071 + MIR SINE MIR 106 146 -62 2053 108 0 14 chr4 8059227 8059536 -176229126 - AluSx SINE Alu 0 312 24 1054 171 6 0 chr4 8259549 8259730 -176028932 + AluSg/x SINE Alu 130 311 -1 564 234 71 0 chr4 8259730 8259884 -176028778 + L1MB8 LINE L1 4535 4699 -1447 * 737 206 5 62 chr4 8259853 8260062 -176028600 + L1MB8 LINE L1 5933 6129 -49 1812 141 7 18 chr4 8260129 8260406 -176028256 - AluJb SINE Alu -34 278 5 25 31 0 0 chr4 8261601 8261633 -176027029 + GC_rich Low_complexity Low_complexity 1 32 0 243 216 0 88 chr4 8261760 8261885 -176026777 + G-rich Low_complexity Low_complexity 6 119 0 425 260 11 33 chr4 8261919 8262100 -176026562 + G-rich Low_complexity Low_complexity 3 179 0 369 272 18 64 chr4 8262120 8262532 -176026130 + G-rich Low_complexity Low_complexity 1 393 0 253 275 18 42 chr4 8262661 8262828 -176025834 + (GGGTG)n Simple_repeat Simple_repeat 3 165 0 409 300 146 35 chr4 8263205 8263492 -176025170 + L1MC3 LINE L1 7467 7785 0 2489 53 0 34 chr4 8263775 8264097 -176024565 - AluY SINE Alu 0 311 1 1723 99 110 58 chr4 8264099 8264240 -176024422 - AluSc SINE Alu -2 307 175 261 0 0 0 chr4 8264240 8264269 -176024393 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1888 112 22 0 chr4 8264273 8264540 -176024122 - AluSg SINE Alu -35 275 3 1723 99 110 58 chr4 8264540 8264685 -176023977 - AluSc SINE Alu -136 173 1 1240 86 145 68 chr4 8264687 8264830 -176023832 - AluSx SINE Alu -3 309 140 2070 106 0 3 chr4 8264830 8265113 -176023549 - AluSg SINE Alu -24 286 5 1240 86 145 68 chr4 8265113 8265203 -176023459 - AluSx SINE Alu -172 140 58 2227 100 10 0 chr4 8265232 8265541 -176023121 - AluSx SINE Alu 0 312 1 1947 69 102 4 chr4 8266116 8266390 -176022272 - AluY SINE Alu -10 301 1 568 300 40 4 chr4 8267477 8267704 -176020958 + MER90 LTR ERV1 30 264 -311 893 332 93 59 chr4 8268130 8268339 -176020323 - L1M4 LINE L1 -803 5343 5143 2081 113 0 17 chr4 8268339 8268641 -176020021 - AluSg SINE Alu -13 297 1 893 332 93 59 chr4 8268641 8269223 -176019439 - L1M4 LINE L1 -1003 5143 4525 2307 100 0 0 chr4 8269223 8269522 -176019140 + AluSq SINE Alu 1 299 -14 779 147 17 2 chr4 8269537 8269768 -176018894 + AluJo SINE Alu 8 299 -13 2339 80 13 10 chr4 8269801 8270113 -176018549 - AluSp SINE Alu 0 313 1 2364 86 0 3 chr4 8270113 8270416 -176018246 - AluSp SINE Alu -11 302 1 1782 147 42 0 chr4 8270450 8270736 -176017926 + AluSx SINE Alu 1 298 -14 2395 87 0 3 chr4 8270795 8271107 -176017555 - AluSx SINE Alu -1 311 1 424 352 100 18 chr4 8273104 8273445 -176015217 + L1M4 LINE L1 4622 4990 -1156 2179 93 7 7 chr4 8273448 8273748 -176014914 + AluSx SINE Alu 1 300 -12 1455 161 59 22 chr4 8273874 8273910 -176014752 - MER34B LTR ERV1 0 565 532 1950 125 14 0 chr4 8273910 8274221 -176014441 - AluSx SINE Alu 0 315 1 1455 161 59 22 chr4 8274221 8274505 -176014157 - MER34B LTR ERV1 -33 532 232 1800 146 58 48 chr4 8274506 8274884 -176013778 - MSTB LTR MaLR -1 425 44 533 138 0 0 chr4 8274998 8275085 -176013577 - MSTB LTR MaLR -339 87 1 521 194 46 0 chr4 8275085 8275193 -176013469 - MER34B LTR ERV1 -329 236 124 2730 234 57 34 chr4 8275193 8275892 -176012770 + L1M4 LINE L1 3877 4559 -1587 2201 99 7 0 chr4 8275892 8276184 -176012478 - AluSc SINE Alu -15 294 1 2730 234 57 34 chr4 8276184 8276294 -176012368 + L1M4 LINE L1 4559 4665 -1481 2164 113 23 0 chr4 8276294 8276594 -176012068 + AluSx SINE Alu 1 307 -5 2730 234 57 34 chr4 8276594 8276751 -176011911 + L1M4 LINE L1 4665 4866 -1280 4286 171 47 37 chr4 8276765 8277065 -176011597 - L1MB5 LINE L1 -17 6157 5861 2368 57 7 0 chr4 8277065 8277362 -176011300 - AluY SINE Alu -10 301 3 4286 171 47 37 chr4 8277362 8277722 -176010940 - L1MB5 LINE L1 -313 5861 5506 2415 68 13 0 chr4 8277722 8278029 -176010633 - AluY SINE Alu 0 311 1 4286 171 47 37 chr4 8278029 8278364 -176010298 - L1MB5 LINE L1 -668 5506 5153 2072 112 0 3 chr4 8278364 8278716 -176009946 - AluSq SINE Alu 0 351 1 4286 171 47 37 chr4 8278716 8278886 -176009776 - L1MB5 LINE L1 -1021 5153 4986 864 244 52 36 chr4 8278891 8279198 -176009464 + L1M4 LINE L1 4849 5160 -986 1010 114 14 123 chr4 8279741 8279952 -176008710 + AluSg/x SINE Alu 115 302 -8 1050 185 42 75 chr4 8279952 8280104 -176008558 - MLT1A1 LTR MaLR -66 299 161 2131 91 14 0 chr4 8280104 8280390 -176008272 - AluSx SINE Alu -22 290 1 1050 185 42 75 chr4 8280390 8280545 -176008117 - MLT1A1 LTR MaLR -204 161 2 2426 44 7 3 chr4 8280677 8280974 -176007688 + AluY SINE Alu 3 300 -11 223 122 73 0 chr4 8281247 8281288 -176007374 - MIR SINE MIR -56 152 109 390 349 48 26 chr4 8281752 8281941 -176006721 + MIR SINE MIR 51 243 -19 6229 93 12 3 chr4 8282512 8283360 -176005302 - LTR5 LTR ERVK 0 969 115 454 86 43 0 chr4 8283360 8283430 -176005232 - LTR5 LTR ERVK -896 73 1 347 228 11 33 chr4 8284887 8284979 -176003683 - MIR SINE MIR -114 148 59 182 335 52 29 chr4 8287442 8287615 -176001047 + L2 LINE L2 2932 3108 -164 753 241 201 25 chr4 8288742 8289095 -175999567 - MLT1C LTR MaLR 0 467 53 248 57 5 153 chr4 8293657 8293866 -175994796 + (CACCC)n Simple_repeat Simple_repeat 1 178 0 * 320 116 6 81 chr4 8293818 8293990 -175994672 + (CCCCCA)n Simple_repeat Simple_repeat 3 161 0 1357 120 0 0 chr4 8297617 8297808 -175990854 + AluSq SINE Alu 116 306 -7 3143 169 90 15 chr4 8297810 8298430 -175990232 - L1MB3 LINE L1 -23 6160 5483 2096 95 0 74 chr4 8298430 8298768 -175989894 - AluSq SINE Alu 0 313 1 3143 169 90 15 chr4 8298768 8298827 -175989835 - L1MB3 LINE L1 -700 5483 5430 288 0 0 0 chr4 8298850 8298882 -175989780 + (CA)n Simple_repeat Simple_repeat 2 33 0 249 242 15 0 chr4 8299077 8299143 -175989519 - L1ME3A LINE L1 -26 6144 6078 203 105 53 0 chr4 8299231 8299269 -175989393 + GA-rich Low_complexity Low_complexity 3 42 0 191 39 19 77 chr4 8299648 8299700 -175988962 + (CGGGG)n Simple_repeat Simple_repeat 1 49 0 28 86 0 0 chr4 8299911 8299981 -175988681 + GC_rich Low_complexity Low_complexity 1 70 0 327 89 30 0 chr4 8301174 8301242 -175987420 + Alu SINE Alu 1 48 -255 184 288 68 41 chr4 8401882 8401955 -175886707 - L2 LINE L2 -5 3267 3193 527 223 173 50 chr4 8402217 8402437 -175886225 - MIR SINE MIR -9 253 7 403 283 171 52 chr4 8403534 8403927 -175884735 - L1MC5 LINE L1 -73 7888 7441 1909 108 0 15 chr4 8403927 8404187 -175884475 - AluSx SINE Alu -2 310 55 403 283 171 52 chr4 8404187 8404213 -175884449 - L1MC5 LINE L1 -520 7441 7419 259 313 20 33 chr4 8404352 8404502 -175884160 + MIR SINE MIR 64 211 -51 473 216 124 27 chr4 8404862 8405047 -175883615 - MLT1I LTR MaLR -204 205 64 202 348 16 32 chr4 8405268 8405518 -175883144 - L2 LINE L2 -211 3061 2816 450 286 157 77 chr4 8405645 8405926 -175882736 - L1ME4a LINE L1 -7 6114 5857 1980 189 40 11 chr4 8405926 8406301 -175882361 - MLT1B LTR MaLR -4 386 1 450 286 157 77 chr4 8406301 8406529 -175882133 - L1ME4a LINE L1 -264 5857 5564 861 176 0 0 chr4 8406631 8406773 -175881889 - AluSg/x SINE Alu -15 297 156 1253 229 196 5 chr4 8407020 8407392 -175881270 + MLT1G1 LTR MaLR 151 593 -2 3392 190 45 39 chr4 8407736 8407827 -175880835 + Tigger6a DNA MER2_type 225 314 -1283 2227 146 16 11 chr4 8407827 8408190 -175880472 + MLT1A1 LTR MaLR 1 365 0 3392 190 45 39 chr4 8408190 8408762 -175879900 + Tigger6a DNA MER2_type 314 881 -716 2228 117 0 7 chr4 8408762 8409061 -175879601 + AluJo SINE Alu 1 297 -15 3392 190 45 39 chr4 8409061 8409208 -175879454 + Tigger6a DNA MER2_type 881 1036 -561 2039 133 3 3 chr4 8409208 8409509 -175879153 - AluSx SINE Alu -11 301 1 3392 190 45 39 chr4 8409509 8409558 -175879104 + Tigger6a DNA MER2_type 1036 1083 0 260 321 54 9 chr4 8410074 8410186 -175878476 - L1ME4a LINE L1 -30 6091 5975 352 263 59 59 chr4 8410201 8410353 -175878309 - L1ME4a LINE L1 -226 5895 5744 230 266 0 0 chr4 8411635 8411699 -175876963 - MIR SINE MIR -123 139 76 823 285 70 12 chr4 8411709 8412236 -175876426 - MLT1H1 LTR MaLR -12 543 1 243 125 0 0 chr4 8413880 8413920 -175874742 + MIR SINE MIR 107 146 -62 343 305 49 58 chr4 8415182 8415405 -175873257 - L2 LINE L2 -30 3242 3022 198 318 91 0 chr4 8415401 8415489 -175873173 - L2 LINE L2 -4 3309 3214 * 394 331 7 22 chr4 8416205 8416344 -175872318 - MIR SINE MIR -117 145 9 21 0 0 0 chr4 8416981 8417002 -175871660 + AT_rich Low_complexity Low_complexity 1 21 0 492 137 0 14 chr4 8418080 8418153 -175870509 - AluS SINE Alu -240 73 2 343 306 30 0 chr4 8418153 8418287 -175870375 + MIR SINE MIR 113 250 -12 248 322 11 0 chr4 8418627 8418714 -175869948 - MIR SINE MIR -132 130 43 189 0 0 0 chr4 8418894 8418915 -175869747 + (TGGGGG)n Simple_repeat Simple_repeat 3 23 0 202 289 66 0 chr4 8419600 8419676 -175868986 + MIR SINE MIR 105 185 -77 310 339 48 0 chr4 8419862 8419986 -175868676 - MIR SINE MIR -44 218 89 427 269 9 99 chr4 8420243 8420455 -175868207 - MIR SINE MIR -45 217 25 827 188 7 7 chr4 8420693 8420863 -175867799 - FRAM SINE Alu 0 167 1 2014 137 0 13 chr4 8421214 8421528 -175867134 - AluJb SINE Alu 0 312 3 267 349 28 9 chr4 8421991 8422100 -175866562 + MIR SINE MIR 117 227 -35 405 338 25 6 chr4 8422706 8422866 -175865796 - MIR SINE MIR -80 182 20 196 300 33 0 chr4 8423440 8423500 -175865162 + MIR SINE MIR 92 153 -55 935 245 17 12 chr4 8423590 8423831 -175864831 + MIR SINE MIR 14 255 -7 910 306 43 10 chr4 8425247 8425639 -175863023 + LTR16C LTR ERVL 82 486 -5 329 314 51 22 chr4 8428928 8429065 -175859597 + MIR3 SINE MIR 64 204 -4 242 347 107 0 chr4 8429387 8429508 -175859154 - Charlie8 DNA MER1_type -2247 170 37 1030 206 55 32 chr4 8429560 8429778 -175858884 + MER58A DNA MER1_type 2 224 0 2198 173 8 6 chr4 8430173 8430537 -175858125 - MLT1A1 LTR MaLR 0 365 1 594 325 91 52 chr4 8430929 8431465 -175857197 + HAL1b LINE L1 82 384 -1033 538 253 70 54 chr4 8431486 8431727 -175856935 + L1MC4a LINE L1 5292 5536 -2272 2203 125 0 0 chr4 8431774 8432086 -175856576 + AluSx SINE Alu 1 312 0 446 302 85 0 chr4 8432104 8432316 -175856346 + L1MC4a LINE L1 5674 5903 -1905 795 278 75 4 chr4 8432529 8432770 -175855892 + MIR SINE MIR 4 261 -1 190 308 158 14 chr4 8432827 8432973 -175855689 - L2 LINE L2 -117 3155 2989 2354 127 48 17 chr4 8433215 8433631 -175855031 - Tigger2a DNA MER2_type -5 429 1 773 237 121 16 chr4 8433633 8433890 -175854772 + MER46C DNA MER2_type 26 309 -29 204 311 78 0 chr4 8434121 8434224 -175854438 - L2 LINE L2 -581 2733 2623 1503 186 130 6 chr4 8434306 8434628 -175854034 + MLT1A1 LTR MaLR 1 362 -3 403 323 43 12 chr4 8435072 8435233 -175853429 - MER63A DNA MER1_type -3 207 42 2252 103 0 0 chr4 8435481 8435792 -175852870 - AluSx SINE Alu -1 311 1 308 221 213 52 chr4 8436053 8436189 -175852473 + MIR SINE MIR 14 171 -91 206 246 49 0 chr4 8436431 8436492 -175852170 + MIR SINE MIR 58 121 -87 1205 229 5 0 chr4 8437236 8437459 -175851203 + MER58A DNA MER1_type 1 224 0 342 265 62 37 chr4 8437497 8437659 -175851003 + MIR SINE MIR 11 176 -86 257 258 61 0 chr4 8438431 8438497 -175850165 + MIR SINE MIR 123 192 -70 350 211 56 0 chr4 8439165 8439236 -175849426 - L2 LINE L2 -1 3271 3197 490 150 42 0 chr4 8440484 8440604 -175848058 + (CA)n Simple_repeat Simple_repeat 2 126 0 573 318 26 0 chr4 8441364 8441559 -175847103 - MIR SINE MIR -34 228 29 285 51 0 0 chr4 8442478 8442517 -175846145 + (CCCTAA)n Simple_repeat Simple_repeat 5 43 0 407 268 91 103 chr4 8442597 8442914 -175845748 + L2 LINE L2 2922 3235 -78 2194 112 6 6 chr4 8442914 8443226 -175845436 + AluSx SINE Alu 1 312 0 407 268 91 103 chr4 8443226 8443304 -175845358 + L2 LINE L2 3235 3312 -1 2642 111 16 5 chr4 8443564 8443950 -175844712 + MLT1B LTR MaLR 1 390 0 261 292 7 73 chr4 8443991 8444128 -175844534 - MIR SINE MIR -111 151 24 1462 217 119 14 chr4 8446419 8446788 -175841874 + MLT1C LTR MaLR 59 466 -1 352 198 49 0 chr4 8446878 8446959 -175841703 - MER58C DNA MER1_type -16 199 115 1889 108 0 34 chr4 8446960 8447255 -175841407 - AluSx SINE Alu 0 312 28 249 226 60 12 chr4 8447269 8447353 -175841309 - MER58 DNA MER1_type -70 145 58 237 247 22 56 chr4 8447512 8447601 -175841061 + L2 LINE L2 3185 3270 -2 372 293 67 30 chr4 8447952 8448116 -175840546 + MIR SINE MIR 15 184 -78 377 238 25 17 chr4 8448279 8448407 -175840255 - MIR SINE MIR -58 150 35 415 227 134 0 chr4 8450026 8450145 -175838517 + MIR SINE MIR 15 149 -113 196 370 16 8 chr4 8450231 8450358 -175838304 - L2 LINE L2 -882 2432 2305 652 298 93 0 chr4 8450428 8450686 -175837976 + L3 LINE CR1 1271 1552 -25 294 311 21 10 chr4 8451558 8451699 -175836963 - MIR SINE MIR -69 139 11 212 329 12 12 chr4 8451755 8451840 -175836822 + MIR SINE MIR 108 192 -70 402 21 0 0 chr4 8452278 8452325 -175836337 + (CA)n Simple_repeat Simple_repeat 2 48 0 227 293 40 10 chr4 8452541 8452640 -175836022 + MIR SINE MIR 34 135 -127 376 351 0 6 chr4 8453056 8453230 -175835432 + (TG)n Simple_repeat Simple_repeat 1 173 0 2119 151 11 3 chr4 8453343 8453694 -175834968 - MLT1A1 LTR MaLR 0 365 12 213 288 45 0 chr4 8453826 8453892 -175834770 + MIR SINE MIR 45 113 -95 247 354 27 4 chr4 8453963 8454120 -175834542 + MIR SINE MIR 84 246 -16 213 159 0 0 chr4 8454401 8454445 -175834217 - MIR SINE MIR -41 221 178 2488 65 0 0 chr4 8454544 8454851 -175833811 + AluY SINE Alu 1 307 -4 638 250 0 73 chr4 8455108 8455224 -175833438 + MIR SINE MIR 35 134 -128 1859 130 0 11 chr4 8455224 8455554 -175833108 + AluJb SINE Alu 1 327 0 638 250 0 73 chr4 8455554 8455628 -175833034 + MIR SINE MIR 134 212 -50 266 293 116 0 chr4 8456440 8456587 -175832075 - L2 LINE L2 -215 3057 2894 218 350 26 17 chr4 8456597 8456714 -175831948 + MIR SINE MIR 33 150 -58 249 337 123 6 chr4 8457643 8457806 -175830856 + MER5A DNA MER1_type 7 188 -1 1375 205 91 3 chr4 8458264 8458561 -175830101 - MER33 DNA MER1_type -1 323 1 2126 98 7 19 chr4 8458696 8459003 -175829659 + AluSx SINE Alu 1 303 -9 857 237 142 42 chr4 8459191 8459593 -175829069 - MLT1D LTR MaLR -16 451 31 1670 125 3 96 chr4 8459603 8459947 -175828715 - AluSx SINE Alu 0 312 1 218 343 0 0 chr4 8460264 8460337 -175828325 + MIR SINE MIR 180 252 -10 412 294 94 31 chr4 8461132 8461292 -175827370 + MIR SINE MIR 61 230 -32 576 327 25 15 chr4 8461324 8461526 -175827136 - MIR SINE MIR -23 239 36 199 245 147 39 chr4 8461704 8461806 -175826856 + MER5A DNA MER1_type 47 159 -30 300 255 36 31 chr4 8462330 8462456 -175826206 - MIR3 SINE MIR -114 94 10 2004 100 0 0 chr4 8462505 8462776 -175825886 - AluSx SINE Alu -2 310 40 306 336 97 26 chr4 8463612 8463838 -175824824 + L2 LINE L2 2994 3235 -37 268 178 27 14 chr4 8463865 8463938 -175824724 + GA-rich Low_complexity Low_complexity 1 74 0 630 283 5 56 chr4 8464297 8464495 -175824167 - MIR SINE MIR -69 193 6 1688 148 64 27 chr4 8465833 8466237 -175822425 - Charlie1 DNA MER1_type 0 2761 2343 271 262 0 0 chr4 8466244 8466305 -175822357 - Charlie1 DNA MER1_type -2700 61 1 2487 266 57 23 chr4 8467147 8468575 -175820087 - L1ME1 LINE L1 -26 6140 4665 522 251 95 6 chr4 8468587 8468766 -175819896 - MIR SINE MIR -59 203 9 377 241 0 0 chr4 8469346 8469425 -175819237 - MER63 DNA MER1_type -5 1057 979 354 245 23 23 chr4 8469451 8469614 -175819048 - MER63 DNA MER1_type -9 1679 39 283 348 18 9 chr4 8469671 8469783 -175818879 + MIR SINE MIR 108 220 -42 194 250 62 0 chr4 8469986 8470050 -175818612 + MIR SINE MIR 114 181 -81 373 366 52 0 chr4 8470933 8471105 -175817557 + L2 LINE L2 3092 3272 0 413 313 101 0 chr4 8471198 8471415 -175817247 - L2 LINE L2 -537 2777 2539 226 304 0 0 chr4 8471791 8471847 -175816815 - MIR SINE MIR -96 166 111 325 248 155 19 chr4 8472002 8472163 -175816499 - MIR SINE MIR 0 262 80 318 337 101 18 chr4 8472196 8472365 -175816297 - MER5A DNA MER1_type 0 189 7 1449 191 2 97 chr4 8472932 8473357 -175815305 + L1MB5 LINE L1 5790 6174 0 1018 282 133 16 chr4 8473651 8474161 -175814501 + L2 LINE L2 2747 3308 -5 1157 156 6 0 chr4 8474161 8474341 -175814321 - L1MB4 LINE L1 0 6180 6000 306 214 107 24 chr4 8474466 8474550 -175814112 - MIR SINE MIR -73 135 45 247 270 37 10 chr4 8475052 8475153 -175813509 - MIR3 SINE MIR -46 162 57 765 284 47 17 chr4 8476484 8476720 -175811942 + MIR SINE MIR 9 251 -11 346 286 20 82 chr4 8477185 8477332 -175811330 - MIR SINE MIR -71 191 54 1011 214 5 9 chr4 8477489 8477713 -175810949 - MLT1C LTR MaLR 0 467 245 356 105 0 0 chr4 8477719 8477776 -175810886 - Alu SINE Alu -242 57 1 891 235 28 12 chr4 8477790 8478037 -175810625 - MLT1C LTR MaLR -216 251 1 181 265 286 0 chr4 8478422 8478520 -175810142 + MIR SINE MIR 63 188 -74 2413 252 45 57 chr4 8478539 8478555 -175810107 - L1ME LINE L1 -4593 1487 1472 1988 109 29 29 chr4 8478555 8478867 -175809795 - AluSq SINE Alu -1 312 1 2413 252 45 57 chr4 8478867 8480350 -175808312 - L1ME LINE L1 -4608 1472 10 231 235 0 0 chr4 8480352 8480403 -175808259 + MIR SINE MIR 211 261 -1 2163 122 10 0 chr4 8480529 8480833 -175807829 + AluSx SINE Alu 1 307 -5 205 179 0 128 chr4 8480845 8480923 -175807739 - L2 LINE L2 -189 3083 3016 387 307 92 7 chr4 8481393 8481546 -175807116 - MIR SINE MIR -66 196 31 299 307 23 0 chr4 8481575 8481663 -175806999 + MIR SINE MIR 117 206 -56 257 250 50 75 chr4 8481790 8481820 -175806842 - L1ME4a LINE L1 -1 6120 6091 509 189 0 0 chr4 8481820 8481910 -175806752 + L1MA10 LINE L1 6243 6332 -2 257 250 50 75 chr4 8481910 8482039 -175806623 - L1ME4a LINE L1 -30 6091 5965 420 380 121 13 chr4 8482553 8483001 -175805661 - L2 LINE L2 -3 3310 2815 545 218 316 15 chr4 8483457 8483679 -175804983 - L2 LINE L2 -532 2782 2628 369 0 0 0 chr4 8483679 8483720 -175804942 + (TG)n Simple_repeat Simple_repeat 1 41 0 * 486 0 0 0 chr4 8483719 8483773 -175804889 + (GA)n Simple_repeat Simple_repeat 1 54 0 545 218 316 15 chr4 8483720 8483885 -175804777 - L2 LINE L2 -686 2628 2347 296 359 8 0 chr4 8484161 8484292 -175804370 - Charlie8 DNA MER1_type -2213 204 73 246 211 21 21 chr4 8486352 8486447 -175802215 + G-rich Low_complexity Low_complexity 3 97 0 317 295 74 58 chr4 8486537 8486727 -175801935 - MIR SINE MIR -55 207 15 264 358 47 0 chr4 8487419 8487567 -175801095 + MIR SINE MIR 87 241 -21 2176 101 0 13 chr4 8488715 8489022 -175799640 - AluSx SINE Alu -9 303 1 1843 149 3 10 chr4 8489650 8489946 -175798716 + AluJb SINE Alu 9 302 -10 190 365 12 12 chr4 8490024 8490109 -175798553 + MIR SINE MIR 44 128 -134 796 160 42 61 chr4 8490161 8490373 -175798289 - MLT2D LTR ERVL 0 414 207 283 339 85 12 chr4 8490659 8490824 -175797838 + MIR SINE MIR 36 212 -50 295 278 0 75 chr4 8490857 8490990 -175797672 - MIR SINE MIR -112 150 28 303 353 17 8 chr4 8491577 8491696 -175796966 - L2 LINE L2 -20 3252 3133 219 389 45 54 chr4 8491757 8491978 -175796684 + L2 LINE L2 2957 3175 -97 324 240 0 0 chr4 8492466 8492566 -175796096 + (CA)n Simple_repeat Simple_repeat 1 100 0 255 302 29 86 chr4 8492749 8492888 -175795774 - L2 LINE L2 0 3272 3142 240 282 69 23 chr4 8493014 8493145 -175795517 - MLT1J2 LTR MaLR -1 449 313 393 190 25 0 chr4 8493247 8493326 -175795336 - MLT1J LTR MaLR -328 183 103 282 300 0 0 chr4 8493428 8493498 -175795164 - MIR SINE MIR -120 142 73 1031 195 35 35 chr4 8494563 8494824 -175793838 - MIR SINE MIR 0 262 2 248 243 87 78 chr4 8495176 8495279 -175793383 + MIR SINE MIR 28 131 -131 283 270 70 0 chr4 8495876 8495976 -175792686 - MLT1K LTR MaLR -408 180 74 381 292 62 31 chr4 8496086 8496247 -175792415 - MIR3 SINE MIR -32 176 11 302 331 37 7 chr4 8496444 8496580 -175792082 - L2 LINE L2 -1 3271 3132 387 309 24 73 chr4 8496812 8497058 -175791604 + MER113 DNA MER1_type? 9 242 -279 597 258 36 36 chr4 8497067 8497261 -175791401 + MER3 DNA MER1_type 1 194 -15 241 232 211 11 chr4 8497907 8498002 -175790660 - L2 LINE L2 -3 3310 3197 547 240 223 26 chr4 8498073 8498302 -175790360 - L2 LINE L2 -2106 1208 935 221 369 70 16 chr4 8499405 8499592 -175789070 + L2 LINE L2 2645 2841 -473 209 345 82 73 chr4 8499652 8499980 -175788682 + L2 LINE L2 2939 3269 -3 197 382 20 20 chr4 8500214 8500316 -175788346 - L3 LINE CR1 -237 1340 1239 251 184 0 0 chr4 8501115 8501164 -175787498 + MIR SINE MIR 31 79 -129 212 333 14 0 chr4 8501184 8501256 -175787406 - L2 LINE L2 0 3272 3200 236 303 45 0 chr4 8501369 8501435 -175787227 + MER91A DNA MER1_type 128 196 0 198 328 160 8 chr4 8501488 8501619 -175787043 + L2 LINE L2 2496 2646 -668 557 330 15 15 chr4 8501626 8501823 -175786839 + MIR SINE MIR 35 231 -31 661 284 155 9 chr4 8501856 8502398 -175786264 + L2 LINE L2 2642 3294 -19 463 228 41 81 chr4 8502689 8502787 -175785875 - MER63A DNA MER1_type -1499 189 101 2375 80 0 3 chr4 8502787 8503099 -175785563 - AluY SINE Alu 0 311 1 463 228 41 81 chr4 8503099 8503197 -175785465 - MER63A DNA MER1_type -1587 101 1 830 257 4 69 chr4 8503354 8503599 -175785063 - MIR SINE MIR -32 230 2 266 327 30 0 chr4 8503677 8503778 -175784884 - MIR SINE MIR -72 190 87 401 380 81 9 chr4 8504803 8505024 -175783638 - MIR SINE MIR -5 257 21 1699 195 18 34 chr4 8505262 8505642 -175783020 + MLT1B LTR MaLR 1 374 -16 385 342 21 0 chr4 8506120 8506282 -175782380 + MIR SINE MIR 8 131 -77 23 54 0 0 chr4 8506778 8506815 -175781847 + AT_rich Low_complexity Low_complexity 1 37 0 235 138 0 0 chr4 8506815 8506873 -175781789 - Charlie5 DNA MER1_type -84 2528 2471 6502 53 4 5 chr4 8506897 8508458 -175780204 - L1PA6 LINE L1 -6 6148 4592 515 248 20 39 chr4 8508881 8509034 -175779628 + MER58B DNA MER1_type 192 341 0 261 307 100 7 chr4 8509194 8509334 -175779328 - MIR3 SINE MIR -49 159 7 254 284 86 9 chr4 8509397 8509513 -175779149 - MIR3 SINE MIR -77 131 7 300 336 41 0 chr4 8509552 8509674 -175778988 - MIR3 SINE MIR -49 159 33 695 313 48 4 chr4 8509705 8509932 -175778730 - MIR SINE MIR -12 250 14 288 298 132 3 chr4 8509931 8510105 -175778557 + MIR SINE MIR 18 208 -54 * 2225 107 3 10 chr4 8510377 8510687 -175777975 - AluSx SINE Alu -4 308 1 1280 27 0 0 chr4 8510864 8511013 -175777649 - L1PA2 LINE L1 0 6155 6007 492 31 0 0 chr4 8511013 8511078 -175777584 + L1PA2 LINE L1 5929 5993 -162 421 332 155 18 chr4 8511181 8511458 -175777204 - L2 LINE L2 0 3313 2999 205 313 12 24 chr4 8511596 8511679 -175776983 + MIR SINE MIR 30 111 -97 213 349 46 34 chr4 8511839 8512014 -175776648 - L2 LINE L2 -2 3270 3094 359 356 101 26 chr4 8512850 8513157 -175775505 - HAL1 LINE L1 -1231 1276 875 337 288 11 43 chr4 8513321 8513593 -175775069 + GA-rich Low_complexity Low_complexity 1 263 0 309 148 0 19 chr4 8513824 8513878 -175774784 - Alu SINE Alu -249 53 1 2417 87 0 0 chr4 8513967 8514276 -175774386 + AluSq SINE Alu 1 309 -4 1366 204 24 21 chr4 8514389 8514722 -175773940 - MLT1A1 LTR MaLR -31 334 1 357 268 42 65 chr4 8514731 8514833 -175773829 + L1ME4a LINE L1 5550 5648 -522 931 219 63 0 chr4 8514833 8515038 -175773624 + MER20 DNA MER1_type 2 219 0 357 268 42 65 chr4 8515038 8515103 -175773559 + L1ME4a LINE L1 5648 5713 -457 372 22 0 0 chr4 8515580 8515625 -175773037 + (TG)n Simple_repeat Simple_repeat 2 46 0 342 315 0 22 chr4 8516221 8516313 -175772349 + L1MC4 LINE L1 6614 6703 -1339 297 264 8 21 chr4 8516323 8516432 -175772230 + L1M3 LINE L1 5360 5468 -700 2273 76 0 48 chr4 8516529 8516844 -175771818 - AluSq SINE Alu -13 300 1 972 138 46 0 chr4 8516852 8517026 -175771636 + L1MA5A LINE L1 6112 6293 -4 1899 128 29 0 chr4 8517053 8517361 -175771301 + AluSx SINE Alu 1 316 0 180 77 0 0 chr4 8517669 8517695 -175770967 + (TATG)n Simple_repeat Simple_repeat 3 28 0 313 313 85 11 chr4 8517847 8518023 -175770639 + L1ME4a LINE L1 5930 6118 -3 1857 123 0 42 chr4 8518176 8518494 -175770168 - AluSx SINE Alu 0 316 11 823 192 315 45 chr4 8518647 8519022 -175769640 - L1MD2 LINE L1 -22 6337 5862 300 361 142 6 chr4 8519211 8519394 -175769268 - MIR SINE MIR -17 245 38 375 306 27 20 chr4 8519410 8519557 -175769105 - MIR3 SINE MIR -58 150 3 541 280 131 14 chr4 8519607 8519728 -175768934 + MIR SINE MIR 4 109 -153 2169 115 7 0 chr4 8519728 8520032 -175768630 - AluSx SINE Alu -6 306 1 541 280 131 14 chr4 8520032 8520142 -175768520 + MIR SINE MIR 109 262 0 311 239 99 0 chr4 8520164 8520235 -175768427 + MIR SINE MIR 31 108 -154 1853 153 40 0 chr4 8520264 8520564 -175768098 + AluJb SINE Alu 1 312 0 469 326 163 24 chr4 8521030 8521159 -175767503 + L2 LINE L2 2920 3030 -242 1428 188 9 59 chr4 8521159 8521479 -175767183 - AluJo SINE Alu -8 304 1 469 326 163 24 chr4 8521479 8521637 -175767025 + L2 LINE L2 3030 3247 -25 959 220 112 38 chr4 8521990 8522398 -175766264 + MLT1C LTR MaLR 25 463 -4 469 290 97 5 chr4 8522405 8522591 -175766071 - MIR SINE MIR -57 205 3 268 207 52 0 chr4 8522690 8522748 -175765914 - L3 LINE CR1 -182 1395 1335 362 269 19 0 chr4 8522997 8523105 -175765557 + MER69 DNA AcHobo 64 173 -2353 * 1803 163 67 0 chr4 8523101 8523457 -175765205 - MLT1B LTR MaLR -10 380 1 569 263 229 7 chr4 8523458 8523755 -175764907 + MER69 DNA AcHobo 166 528 -1998 221 265 60 99 chr4 8523841 8523992 -175764670 + MER5A DNA MER1_type 38 182 -7 1117 210 170 51 chr4 8525333 8525781 -175762881 - MLT1D LTR MaLR -4 501 1 213 302 0 0 chr4 8526195 8526248 -175762414 - MIR SINE MIR -61 147 95 1932 113 3 31 chr4 8527169 8527496 -175761166 - AluSx SINE Alu 0 319 1 295 313 52 0 chr4 8527700 8527796 -175760866 - MLT1I LTR MaLR -199 210 110 1168 147 66 0 chr4 8528622 8528819 -175759843 - AluSc SINE Alu -21 288 79 913 50 8 25 chr4 8528818 8528937 -175759725 - AluY SINE Alu -171 140 24 * 703 283 82 9 chr4 8529042 8529261 -175759401 - MIR SINE MIR 0 262 28 254 301 58 39 chr4 8529483 8529586 -175759076 + MIR SINE MIR 20 124 -138 353 246 112 39 chr4 8529627 8529806 -175758856 - MLT1K LTR MaLR -51 537 346 230 325 25 0 chr4 8530957 8531037 -175757625 + L2 LINE L2 3017 3098 -174 375 256 214 12 chr4 8531246 8531414 -175757248 - MIR SINE MIR -1 261 60 334 180 169 45 chr4 8531568 8531657 -175757005 + L2 LINE L2 3168 3267 -5 268 292 80 9 chr4 8532071 8532184 -175756478 - L2 LINE L2 -249 3064 2944 201 366 24 0 chr4 8532534 8532616 -175756046 - L2 LINE L2 -948 2366 2283 984 244 102 48 chr4 8532731 8533191 -175755471 - MLT1D LTR MaLR -20 485 1 407 368 35 26 chr4 8533529 8533757 -175754905 + L1ME4a LINE L1 5666 5895 -226 348 216 201 37 chr4 8533774 8533908 -175754754 + L1ME4a LINE L1 5962 6117 -4 259 337 83 0 chr4 8534551 8534756 -175753906 - L1M4 LINE L1 -2380 3766 3545 1441 142 150 11 chr4 8534797 8535057 -175753605 - AluSg SINE Alu -14 296 1 248 288 68 8 chr4 8535597 8535715 -175752947 - MIR SINE MIR -98 164 40 239 233 163 54 chr4 8536011 8536140 -175752522 - MIR SINE MIR 0 262 120 597 258 0 26 chr4 8536143 8536298 -175752364 - Tigger2 DNA MER2_type -10 2708 2558 471 216 234 0 chr4 8536302 8536372 -175752290 - Tigger2 DNA MER2_type -2509 209 157 459 92 0 0 chr4 8536372 8536437 -175752225 + (TG)n Simple_repeat Simple_repeat 2 66 0 471 216 234 0 chr4 8536437 8536533 -175752129 - Tigger2 DNA MER2_type -2561 157 4 1487 221 126 9 chr4 8536552 8536996 -175751666 - MLT1D LTR MaLR -9 496 1 344 224 82 31 chr4 8536997 8537095 -175751567 - MIR SINE MIR -140 122 20 2144 112 10 0 chr4 8537160 8537455 -175751207 - AluSx SINE Alu -10 302 5 665 269 123 19 chr4 8537600 8538013 -175750649 - L2 LINE L2 -412 2902 2447 260 203 16 16 chr4 8539595 8539659 -175749003 - MIR SINE MIR -63 145 82 187 270 52 52 chr4 8539873 8539988 -175748674 - L2 LINE L2 -1237 2077 1963 228 111 0 0 chr4 8540465 8540501 -175748161 + (TG)n Simple_repeat Simple_repeat 2 37 0 444 82 0 0 chr4 8541357 8541418 -175747244 + (TA)n Simple_repeat Simple_repeat 2 62 0 314 259 80 56 chr4 8541817 8541979 -175746683 - MIR SINE MIR -86 176 11 288 233 0 48 chr4 8542017 8542120 -175746542 - MER58B DNA MER1_type 0 341 244 532 237 10 23 chr4 8542703 8543002 -175745660 + GA-rich Low_complexity Low_complexity 1 295 0 300 209 30 30 chr4 8543018 8543152 -175745510 + GA-rich Low_complexity Low_complexity 2 135 0 382 204 33 39 chr4 8543190 8543371 -175745291 + GA-rich Low_complexity Low_complexity 1 180 0 245 233 0 17 chr4 8543384 8543444 -175745218 + GA-rich Low_complexity Low_complexity 4 62 0 216 167 0 0 chr4 8544311 8544347 -175744315 + C-rich Low_complexity Low_complexity 2 37 0 476 320 178 8 chr4 8544474 8544960 -175743702 + L2 LINE L2 2708 3286 -27 240 86 0 0 chr4 8544972 8545007 -175743655 + (TGAA)n Simple_repeat Simple_repeat 1 35 0 203 244 110 0 chr4 8545861 8545943 -175742719 - MIR SINE MIR -95 113 39 262 313 43 26 chr4 8546049 8546164 -175742498 + MIR SINE MIR 49 165 -97 339 242 11 11 chr4 8547161 8547252 -175741410 - L2 LINE L2 -213 3059 2969 182 283 0 0 chr4 8548134 8548180 -175740482 - MIR SINE MIR -1 261 216 418 306 76 48 chr4 8548233 8548547 -175740115 - MLT1L LTR MaLR -77 538 216 328 307 143 32 chr4 8548646 8548835 -175739827 - MIR SINE MIR -31 231 22 204 311 44 78 chr4 8549234 8549341 -175739321 + L2 LINE L2 3036 3136 -177 1574 184 116 32 chr4 8549341 8549721 -175738941 - MLT2D LTR ERVL -2 412 1 204 311 44 78 chr4 8549721 8549793 -175738869 + L2 LINE L2 3136 3209 -104 539 229 67 14 chr4 8550144 8550317 -175738345 - MIR SINE MIR -64 144 9 321 293 0 9 chr4 8553917 8554023 -175734639 - MLT1K LTR MaLR -322 266 162 734 100 0 0 chr4 8554066 8554166 -175734496 - AluSq SINE Alu -61 252 153 233 246 33 0 chr4 8554925 8554986 -175733676 - MIR SINE MIR -191 71 9 2248 91 3 0 chr4 8555615 8555926 -175732736 - AluSq SINE Alu 0 312 1 1315 148 71 97 chr4 8556110 8556420 -175732242 - AluJo SINE Alu -8 304 3 247 290 0 14 chr4 8557475 8557544 -175731118 - L2 LINE L2 -2 3270 3203 232 280 80 0 chr4 8557674 8557749 -175730913 - L2 LINE L2 0 3272 3192 195 69 0 0 chr4 8558399 8558428 -175730234 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 228 35 0 0 chr4 8559298 8559327 -175729335 + (TGG)n Simple_repeat Simple_repeat 1 29 0 360 364 74 12 chr4 8559560 8559802 -175728860 + MIR SINE MIR 2 258 -4 267 254 30 0 chr4 8559878 8559945 -175728717 - MIR SINE MIR -125 137 69 371 268 16 57 chr4 8560490 8560613 -175728049 - MIR SINE MIR -95 167 50 1394 228 23 49 chr4 8560721 8561151 -175727511 + MLT1D LTR MaLR 85 503 -2 631 329 18 18 chr4 8561852 8562074 -175726588 - MIR SINE MIR -36 226 5 183 328 66 0 chr4 8562276 8562337 -175726325 + L2 LINE L2 3166 3230 -42 440 307 33 0 chr4 8562465 8562677 -175725985 + HAL1 LINE L1 111 329 -2178 902 271 135 67 chr4 8562843 8562937 -175725725 + HAL1 LINE L1 643 729 -1778 1988 133 7 7 chr4 8562937 8563239 -175725423 + AluSx SINE Alu 1 302 -10 902 271 135 67 chr4 8563239 8563704 -175724958 + HAL1 LINE L1 729 1161 -1346 2173 81 3 3 chr4 8563704 8564026 -175724636 + AluSx SINE Alu 1 322 0 902 271 135 67 chr4 8564026 8564414 -175724248 + HAL1 LINE L1 1161 1656 -851 264 214 0 51 chr4 8564414 8564523 -175724139 - MLT1H LTR MaLR 0 549 447 2674 197 23 49 chr4 8564660 8564987 -175723675 - MER41C LTR ERV1 0 554 247 2104 100 3 29 chr4 8564987 8565298 -175723364 - AluSx SINE Alu -9 303 1 2674 197 23 49 chr4 8565298 8565539 -175723123 - MER41C LTR ERV1 -307 247 1 288 216 95 0 chr4 8565737 8565811 -175722851 + HAL1 LINE L1 1682 1762 -745 378 348 84 31 chr4 8565901 8566023 -175722639 + MLT1J LTR MaLR 157 271 -240 3237 158 18 125 chr4 8566023 8566222 -175722440 - LTR8 LTR ERV1 0 691 472 2123 115 0 0 chr4 8566222 8566508 -175722154 - AluSx SINE Alu -26 286 1 3237 158 18 125 chr4 8566508 8567082 -175721580 - LTR8 LTR ERV1 -219 472 1 378 348 84 31 chr4 8567082 8567281 -175721381 + MLT1J LTR MaLR 271 495 -16 1253 286 77 31 chr4 8567300 8567618 -175721044 + HAL1 LINE L1 1750 2052 -455 1940 104 93 0 chr4 8567618 8567898 -175720764 + AluSx SINE Alu 1 306 -6 1253 286 77 31 chr4 8567898 8568232 -175720430 + HAL1 LINE L1 2052 2432 -75 4453 64 7 0 chr4 8568281 8568831 -175719831 - MER41A LTR ERV1 0 554 1 240 209 0 0 chr4 8569095 8569181 -175719481 + (TGAA)n Simple_repeat Simple_repeat 2 87 0 291 312 29 2 chr4 8569224 8569335 -175719327 - MIR SINE MIR -62 146 69 567 278 96 5 chr4 8569343 8569530 -175719132 - MIR SINE MIR -12 250 47 2015 208 21 68 chr4 8569699 8570272 -175718390 - MLT2B3 LTR ERVL -8 546 1 1936 139 76 80 chr4 8570482 8571086 -175717576 + pTR5 LTR ERV1 743 1344 -1094 3209 159 270 1 chr4 8571102 8571750 -175716912 + LTR12 LTR ERV1 5 826 0 512 271 80 24 chr4 8572377 8572794 -175715868 - MLT1F1 LTR MaLR -30 537 10 206 337 58 0 chr4 8572808 8572894 -175715768 + MIR SINE MIR 94 184 -78 1203 205 91 18 chr4 8573800 8574141 -175714521 - MLT1D LTR MaLR -139 366 1 329 333 119 6 chr4 8574278 8574446 -175714216 + L2 LINE L2 3127 3313 0 424 136 45 0 chr4 8575174 8575260 -175713402 + AluJb SINE Alu 213 301 0 306 305 80 53 chr4 8575272 8575423 -175713239 - MIR3 SINE MIR -31 177 23 214 274 57 57 chr4 8575544 8575668 -175712994 + MIR SINE MIR 59 182 -80 313 217 24 6 chr4 8580093 8580259 -175708403 + (CA)n Simple_repeat Simple_repeat 2 170 0 249 222 35 0 chr4 8580288 8580459 -175708203 + (CA)n Simple_repeat Simple_repeat 2 178 0 237 263 17 0 chr4 8580485 8580660 -175708002 + (CA)n Simple_repeat Simple_repeat 2 179 0 1526 179 10 23 chr4 8582948 8583250 -175705412 + AluJb SINE Alu 1 298 -14 190 330 142 34 chr4 8585976 8586209 -175702453 - L2 LINE L2 -784 2530 2273 494 300 184 10 chr4 8586387 8586697 -175701965 - L2 LINE L2 -1220 2094 1731 341 295 9 9 chr4 8587252 8587357 -175701305 - MIR3 SINE MIR -46 162 58 224 274 8 48 chr4 8587664 8587788 -175700874 + L2 LINE L2 2925 3043 -229 290 286 31 0 chr4 8589150 8589248 -175699414 - MIR SINE MIR -60 148 48 301 200 62 0 chr4 8589484 8589549 -175699113 + L1ME4a LINE L1 6048 6116 -5 2043 154 0 0 chr4 8589837 8590148 -175698514 + AluSx SINE Alu 1 311 -1 328 282 105 0 chr4 8590148 8590272 -175698390 + L1ME4a LINE L1 5985 6121 0 747 207 59 12 chr4 8591502 8591671 -175696991 + MER58A DNA MER1_type 35 211 -13 254 239 0 0 chr4 8591682 8591728 -175696934 - MIR3 SINE MIR -51 157 112 2198 116 0 0 chr4 8591840 8592141 -175696521 - AluSx SINE Alu -11 301 1 1825 184 36 33 chr4 8593520 8593884 -175694778 - MLT1A1 LTR MaLR 0 365 1 2145 124 3 10 chr4 8595673 8595987 -175692675 - AluSq SINE Alu -1 312 1 239 233 70 35 chr4 8596207 8596293 -175692369 + MLT1K LTR MaLR 16 104 -484 912 267 137 37 chr4 8596296 8596727 -175691935 + MLT1K LTR MaLR 3 476 0 448 328 73 25 chr4 8600583 8600787 -175687875 + MIR SINE MIR 36 249 -13 223 242 71 50 chr4 8601432 8601531 -175687131 + MIR SINE MIR 31 131 -77 841 212 29 24 chr4 8603022 8603395 -175685267 + MLT1C LTR MaLR 51 466 -1 255 196 0 54 chr4 8603424 8603480 -175685182 + G-rich Low_complexity Low_complexity 2 54 0 326 271 28 19 chr4 8604019 8604126 -175684536 + MIR SINE MIR 39 146 -116 219 288 17 0 chr4 8605003 8605062 -175683600 - MIR SINE MIR -79 183 124 303 265 51 43 chr4 8605072 8605189 -175683473 - MIR SINE MIR -54 154 37 377 191 95 0 chr4 8605599 8605683 -175682979 + MIR SINE MIR 102 193 -69 2460 70 0 3 chr4 8605729 8606041 -175682621 + AluY SINE Alu 1 311 0 249 310 69 21 chr4 8607311 8607456 -175681206 + L1ME4a LINE L1 5968 6119 -2 306 309 57 0 chr4 8609142 8609265 -175679397 + MIR SINE MIR 60 189 -73 27 110 0 0 chr4 8609720 8609838 -175678824 + GC_rich Low_complexity Low_complexity 1 118 0 33 0 0 0 chr4 8610460 8610493 -175678169 + GC_rich Low_complexity Low_complexity 1 33 0 221 321 107 14 chr4 8611267 8611407 -175677255 - MIR SINE MIR -23 239 87 324 231 231 11 chr4 8611427 8611518 -175677144 - L1ME4a LINE L1 -21 6100 5990 328 394 45 10 chr4 8611754 8611952 -175676710 + HAL1 LINE L1 1046 1250 -1257 233 271 71 0 chr4 8612000 8612070 -175676592 + HAL1 LINE L1 1405 1479 -1028 213 121 0 0 chr4 8613385 8613418 -175675244 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 2126 118 0 6 chr4 8613629 8613942 -175674720 + AluSx SINE Alu 1 311 -1 181 347 13 0 chr4 8613957 8614032 -175674630 - L2 LINE L2 -13 3259 3184 746 207 179 50 chr4 8614098 8614466 -175674196 + MLT1D LTR MaLR 22 430 -37 1760 92 117 18 chr4 8614512 8614794 -175673868 + AluSp SINE Alu 1 310 -3 1767 196 0 3 chr4 8614805 8615183 -175673479 + AluJo SINE Alu 1 377 0 279 356 0 10 chr4 8615229 8615333 -175673329 + MER5A DNA MER1_type 84 186 -3 331 220 150 116 chr4 8615348 8615521 -175673141 + MER5A DNA MER1_type 3 181 -8 807 169 0 0 chr4 8615524 8615648 -175673014 + FLAM_A SINE Alu 8 131 -11 1423 162 113 19 chr4 8617164 8617430 -175671232 - AluJb SINE Alu -21 291 1 2497 216 58 21 chr4 8617442 8618024 -175670638 - L1MC1 LINE L1 -1 6332 5729 320 309 63 16 chr4 8618248 8618374 -175670288 - MIR SINE MIR -46 216 85 1694 158 3 58 chr4 8618585 8618915 -175669747 - AluJb SINE Alu 0 312 1 2277 105 0 0 chr4 8618975 8619280 -175669382 + AluSc SINE Alu 1 305 -4 204 255 0 0 chr4 8620152 8620199 -175668463 - MIR SINE MIR -93 169 123 1378 141 33 40 chr4 8620264 8620568 -175668094 - AluY SINE Alu -7 304 3 204 255 0 0 chr4 8621058 8621105 -175667557 - MIR SINE MIR -93 169 123 2353 51 34 0 chr4 8621170 8621464 -175667198 - AluY SINE Alu -7 304 1 2065 101 34 0 chr4 8621464 8621760 -175666902 - AluSx SINE Alu -6 306 1 231 229 0 0 chr4 8621824 8621872 -175666790 - MIR SINE MIR -137 125 78 1014 75 0 61 chr4 8622228 8622375 -175666287 + AluSq/x SINE Alu 1 138 -175 1855 147 20 0 chr4 8622377 8622676 -175665986 + AluSx SINE Alu 6 310 -2 255 31 0 0 chr4 8623065 8623097 -175665565 + (TGAA)n Simple_repeat Simple_repeat 3 34 0 629 261 138 4 chr4 8623104 8623364 -175665298 + L2 LINE L2 2670 2964 -350 594 231 104 73 chr4 8623597 8623854 -175664808 - MLT1C LTR MaLR -16 451 181 2034 117 27 0 chr4 8623854 8624152 -175664510 - AluSx SINE Alu -3 309 4 594 231 104 73 chr4 8624152 8624210 -175664452 - MLT1C LTR MaLR -286 181 126 310 191 32 0 chr4 8624208 8624271 -175664391 + MER50 LTR ERV1 10 74 -660 * 350 199 155 10 chr4 8624289 8624392 -175664270 - MLT1C LTR MaLR -263 127 9 225 298 115 10 chr4 8624667 8624771 -175663891 + L3 LINE CR1 1460 1574 -3 1627 127 3 67 chr4 8624787 8624901 -175663761 + AluJo SINE Alu 1 121 -191 2187 131 49 25 chr4 8624901 8625267 -175663395 - THE1C LTR MaLR 0 375 1 1627 127 3 67 chr4 8625267 8625436 -175663226 + AluJo SINE Alu 121 266 -46 642 314 101 18 chr4 8625457 8625785 -175662877 + MLT1J2 LTR MaLR 96 450 0 528 323 32 32 chr4 8625785 8626002 -175662660 + MIR SINE MIR 40 256 -6 185 317 0 0 chr4 8626264 8626324 -175662338 - MER5A DNA MER1_type -2 187 128 335 291 185 7 chr4 8626355 8626506 -175662156 + MER5A DNA MER1_type 4 181 -8 258 229 105 67 chr4 8626836 8626941 -175661721 - MIR SINE MIR -70 138 30 222 232 49 61 chr4 8626986 8627068 -175661594 - MER5B DNA MER1_type -30 148 68 187 370 99 6 chr4 8627263 8627425 -175661237 - L2 LINE L2 -168 3104 2928 780 248 169 12 chr4 8627443 8628010 -175660652 + L2 LINE L2 2624 3295 -18 2038 104 21 3 chr4 8628200 8628489 -175660173 - AluSg SINE Alu -16 294 1 336 275 9 46 chr4 8628885 8628994 -175659668 + MIR SINE MIR 47 151 -57 273 302 35 35 chr4 8629284 8629400 -175659262 - MIR3 SINE MIR -21 187 72 1754 165 3 34 chr4 8629548 8629870 -175658792 + AluJb SINE Alu 1 312 0 419 213 11 0 chr4 8630226 8630320 -175658342 - MER5A DNA MER1_type -83 106 12 197 284 91 45 chr4 8630425 8630513 -175658149 - MIR SINE MIR -95 113 22 5016 184 36 9 chr4 8630621 8631708 -175656954 - MER45R DNA AcHobo -8 1573 458 479 312 74 0 chr4 8631881 8632083 -175656579 - MER112 DNA MER1_type -12 248 32 286 282 87 28 chr4 8632694 8632837 -175655825 - MIR SINE MIR -52 210 58 260 336 29 10 chr4 8633147 8633251 -175655411 + MIR3 SINE MIR 68 173 -35 542 121 103 52 chr4 8633258 8633288 -175655374 + MER53 DNA DNA 1 28 -161 3471 73 14 2 chr4 8633288 8633727 -175654935 + MLT2A1 LTR ERVL 1 444 0 542 121 103 52 chr4 8633727 8633812 -175654850 + MER53 DNA DNA 28 122 -67 * 3365 159 11 15 chr4 8633795 8634441 -175654221 - MER50 LTR ERV1 -10 724 3 279 175 113 25 chr4 8634442 8634522 -175654140 - MER53 DNA DNA -102 87 1 276 309 167 0 chr4 8635634 8635802 -175652860 + LTR16C LTR ERVL 205 400 -91 2931 148 60 4 chr4 8635845 8636345 -175652317 + LTR10A LTR ERV1 1 528 -81 346 247 12 0 chr4 8636370 8636451 -175652211 + LTR16C LTR ERVL 410 491 0 315 221 0 0 chr4 8636844 8636930 -175651732 + (CA)n Simple_repeat Simple_repeat 1 86 0 299 321 71 9 chr4 8637370 8637482 -175651180 + L2 LINE L2 3153 3271 -1 2354 56 7 13 chr4 8638798 8639100 -175649562 + AluY SINE Alu 1 300 -11 201 295 64 13 chr4 8639499 8639577 -175649085 + L2 LINE L2 3190 3271 -1 512 194 8 0 chr4 8639973 8640107 -175648555 + (TAAA)n Simple_repeat Simple_repeat 4 138 0 1468 148 121 8 chr4 8640228 8640484 -175648178 + AluSg SINE Alu 1 285 -25 201 254 15 30 chr4 8640555 8640622 -175648040 - MIR SINE MIR -62 146 81 314 349 108 5 chr4 8641220 8641415 -175647247 - MIR SINE MIR -34 228 14 663 118 0 2 chr4 8641599 8641853 -175646809 + AluSx SINE Alu 1 305 0 242 293 13 0 chr4 8641891 8641966 -175646696 + L1MB7 LINE L1 5788 5863 -258 192 163 0 0 chr4 8642013 8642056 -175646606 + CT-rich Low_complexity Low_complexity 2 44 0 255 250 18 36 chr4 8642058 8642170 -175646492 + (TAGA)n Simple_repeat Simple_repeat 4 113 0 2090 128 0 0 chr4 8642297 8642601 -175646061 - AluSx SINE Alu -8 304 1 2118 98 0 7 chr4 8642641 8642948 -175645714 - AluSx SINE Alu 0 305 1 276 336 32 0 chr4 8642975 8643100 -175645562 - L1ME4a LINE L1 0 6121 5993 791 280 24 0 chr4 8643150 8643357 -175645305 + MIR SINE MIR 13 224 -38 2244 210 48 95 chr4 8643967 8644009 -175644653 - L1MB8 LINE L1 0 6178 6136 1543 180 25 3 chr4 8644009 8644327 -175644335 + AluJb SINE Alu 1 312 0 2244 210 48 95 chr4 8644327 8645018 -175643644 - L1MB8 LINE L1 -42 6136 5480 469 243 96 0 chr4 8645211 8645388 -175643274 - MIR SINE MIR -19 243 50 639 265 43 28 chr4 8645495 8645706 -175642956 + L1MB7 LINE L1 5953 6166 -18 198 234 21 0 chr4 8645739 8645786 -175642876 - MIR3 SINE MIR -47 161 114 247 166 33 44 chr4 8646461 8646642 -175642020 + (TG)n Simple_repeat Simple_repeat 2 180 0 261 214 60 86 chr4 8646694 8646811 -175641851 - L2 LINE L2 -143 3129 3016 304 336 25 0 chr4 8646838 8646960 -175641702 - MIR SINE MIR -78 184 60 180 333 26 0 chr4 8647211 8647289 -175641373 + L2 LINE L2 3225 3304 -9 461 310 127 32 chr4 8647300 8647584 -175641078 - L2 LINE L2 0 3313 3003 1017 231 5 0 chr4 8649205 8649408 -175639254 + MER58A DNA MER1_type 21 224 0 680 300 23 9 chr4 8649485 8649705 -175638957 - MIR SINE MIR -19 243 21 305 259 52 26 chr4 8650254 8650370 -175638292 - LTR16C LTR ERVL -20 471 353 410 231 196 7 chr4 8650616 8650759 -175637903 + MER5A DNA MER1_type 14 183 -6 412 303 140 0 chr4 8651271 8651449 -175637213 - L3 LINE CR1 -42 1535 1333 197 274 24 48 chr4 8651449 8651533 -175637129 - L3 LINE CR1 -504 1073 992 320 339 25 8 chr4 8652403 8652524 -175636138 + L2 LINE L2 3181 3303 -10 228 288 0 0 chr4 8653270 8653329 -175635333 + MIR SINE MIR 92 150 -112 188 274 68 14 chr4 8654227 8654300 -175634362 - MIR SINE MIR -73 135 59 615 312 25 0 chr4 8654446 8654648 -175634014 + MIR SINE MIR 44 250 -12 329 324 56 7 chr4 8654752 8654894 -175633768 - L2 LINE L2 -9 3263 3115 186 161 0 0 chr4 8655314 8655345 -175633317 + L2 LINE L2 3264 3294 -19 664 121 0 0 chr4 8656187 8656278 -175632384 - AluJb SINE Alu -23 289 199 482 74 0 158 chr4 8656379 8656474 -175632188 + MADE1 DNA Mariner 1 80 0 1267 215 60 41 chr4 8657162 8657529 -175631133 + MLT1A2 LTR MaLR 1 374 0 1254 146 10 5 chr4 8657545 8657767 -175630895 - AluJb SINE Alu 0 308 86 642 268 105 8 chr4 8657891 8658130 -175630532 + MIR SINE MIR 1 262 0 823 200 87 20 chr4 8658258 8658453 -175630209 + MLT1J LTR MaLR 190 397 -114 542 268 153 10 chr4 8659499 8659708 -175628954 + MIR SINE MIR 24 262 0 364 255 10 31 chr4 8659845 8659943 -175628719 + MIR SINE MIR 97 192 -70 1364 200 31 7 chr4 8660020 8660310 -175628352 + AluJo SINE Alu 1 297 -15 216 330 29 19 chr4 8660379 8660482 -175628180 - MIR3 SINE MIR -14 194 91 337 277 57 29 chr4 8660604 8660978 -175627684 + L1P LINE L1 4672 5054 -1092 1473 269 51 76 chr4 8661251 8661798 -175626864 + L1MC4a LINE L1 493 1012 -5193 674 222 0 0 chr4 8661798 8661950 -175626712 + FLAM_A SINE Alu 1 152 0 1473 269 51 76 chr4 8661950 8662270 -175626392 + L1MC4a LINE L1 1012 1339 -4866 591 248 19 6 chr4 8662380 8662541 -175626121 + MER104 DNA Tc2 1 163 -17 253 203 25 25 chr4 8662570 8662649 -175626013 + HAL1 LINE L1 1494 1572 -935 1032 324 48 30 chr4 8662686 8663417 -175625245 + L1MEc LINE L1 107 850 -5546 387 210 20 108 chr4 8663411 8663606 -175625056 + L1MEc LINE L1 2838 3015 -3200 * 856 178 89 0 chr4 8663663 8663854 -175624808 - L1MB3 LINE L1 -143 6040 5833 435 282 77 71 chr4 8664011 8664562 -175624100 + L1MC4a LINE L1 2093 2614 -3601 3476 163 26 53 chr4 8664562 8665296 -175623366 - L1MB3 LINE L1 0 6183 5468 1772 208 43 3 chr4 8665296 8665643 -175623019 - MLT1A1 LTR MaLR -4 361 1 3476 163 26 53 chr4 8665643 8665665 -175622997 - L1MB3 LINE L1 -715 5468 5447 435 282 77 71 chr4 8665665 8665787 -175622875 + L1MC4a LINE L1 2614 2734 -3481 1247 279 91 36 chr4 8665810 8666539 -175622123 + L1MC4a LINE L1 4436 5204 -1011 1292 158 0 23 chr4 8666559 8666780 -175621882 - AluJo SINE Alu -25 287 72 588 192 13 40 chr4 8667823 8667974 -175620688 + MER68 LTR ERV1 72 218 -344 683 284 34 59 chr4 8719433 8719672 -175568990 - MIR SINE MIR -14 248 16 35 41 0 0 chr4 8719733 8719782 -175568880 + AT_rich Low_complexity Low_complexity 1 49 0 1684 94 51 0 chr4 8719827 8720062 -175568600 + AluSq SINE Alu 1 247 -66 192 282 117 29 chr4 8721347 8721450 -175567212 + MIR SINE MIR 20 131 -131 984 185 0 14 chr4 8721542 8721753 -175566909 + MER96B DNA MER1_type? 4 211 -206 821 160 96 0 chr4 8721880 8722036 -175566626 - AluJb SINE Alu -21 291 121 285 273 37 59 chr4 8722372 8722529 -175566133 + L1MC4a LINE L1 5772 5926 -1951 2120 114 0 7 chr4 8722529 8722827 -175565835 + AluSq SINE Alu 1 296 -17 285 273 37 59 chr4 8722827 8722856 -175565806 + L1MC4a LINE L1 5926 5954 -1923 476 113 0 0 chr4 8723713 8723784 -175564878 + MLT1B LTR MaLR 119 189 -201 773 153 0 8 chr4 8723817 8723941 -175564721 + FRAM SINE Alu 49 171 -5 805 194 70 0 chr4 8723945 8724131 -175564531 + MLT1B LTR MaLR 192 390 0 270 221 63 32 chr4 8724349 8724444 -175564218 - L2 LINE L2 -258 3014 2917 1911 133 3 14 chr4 8725062 8725355 -175563307 + AluJo SINE Alu 1 290 -22 2022 123 0 13 chr4 8725355 8725655 -175563007 - AluSx SINE Alu -16 296 1 376 328 66 25 chr4 8725660 8725904 -175562758 - HERV16 LTR ERVL -3456 1540 1287 213 213 0 0 chr4 8726627 8726674 -175561988 + CT-rich Low_complexity Low_complexity 3 49 0 884 188 152 25 chr4 8726854 8727130 -175561532 + MLT1C LTR MaLR 17 327 -140 187 256 23 0 chr4 8727202 8727245 -175561417 - MIR SINE MIR -102 160 117 499 183 0 11 chr4 8727621 8727714 -175560948 - MLT1I LTR MaLR -317 92 1 1823 161 0 3 chr4 8727767 8728058 -175560604 + AluSx SINE Alu 22 311 -1 233 307 40 10 chr4 8728217 8728318 -175560344 + L1MC/D LINE L1 5475 5578 -766 318 324 119 26 chr4 8728351 8728703 -175559959 - LTR16A LTR ERVL -53 397 13 235 341 47 0 chr4 8728805 8728890 -175559772 + L2 LINE L2 3180 3268 -4 463 259 40 26 chr4 8728925 8729176 -175559486 + L2 LINE L2 2580 2944 -328 339 200 0 29 chr4 8729190 8729260 -175559402 - L2 LINE L2 -241 3072 3005 231 232 0 0 chr4 8729377 8729433 -175559229 + (TGGA)n Simple_repeat Simple_repeat 2 57 0 264 260 55 0 chr4 8729897 8729970 -175558692 + MIR3 SINE MIR 115 191 -17 353 240 156 7 chr4 8730850 8731004 -175557658 - MIR3 SINE MIR -15 193 17 4422 188 21 40 chr4 8733129 8734346 -175554316 - L1M2 LINE L1 -744 5402 4315 1049 184 16 5 chr4 8734880 8735070 -175553592 + AluJb SINE Alu 43 234 -78 1535 148 0 49 chr4 8735139 8735423 -175553239 + AluJo SINE Alu 31 300 -12 2308 96 0 0 chr4 8735433 8735734 -175552928 + AluSq SINE Alu 1 301 -12 1045 186 29 0 chr4 8735743 8735947 -175552715 + MLT1A1 LTR MaLR 156 365 0 240 206 82 27 chr4 8735947 8736011 -175552651 + MLT1C LTR MaLR 496 563 -4 1409 216 26 31 chr4 8736032 8736265 -175552397 - L1ME LINE L1 -384 5778 5546 1059 228 60 85 chr4 8736265 8736665 -175551997 + MLT1B LTR MaLR 1 390 0 1409 216 26 31 chr4 8736665 8736852 -175551810 - L1ME LINE L1 -616 5546 5360 395 277 31 15 chr4 8737338 8737468 -175551194 - MER63A DNA MER1_type -26 184 53 264 143 0 0 chr4 8737563 8737605 -175551057 + (TGAA)n Simple_repeat Simple_repeat 4 45 0 981 162 9 12 chr4 8737607 8737936 -175550726 + (TGAG)n Simple_repeat Simple_repeat 1 327 0 307 371 111 22 chr4 8738252 8738613 -175550049 - L2 LINE L2 -3 3269 2877 201 278 19 0 chr4 8738622 8738676 -175549986 + L2 LINE L2 3217 3271 -1 299 226 66 47 chr4 8738968 8739074 -175549588 - MIR3 SINE MIR 0 208 101 596 271 81 9 chr4 8740518 8740739 -175547923 + MLT1D LTR MaLR 261 497 -8 318 98 0 0 chr4 8742138 8742189 -175546473 + (TTCA)n Simple_repeat Simple_repeat 4 54 0 243 320 70 23 chr4 8742286 8742414 -175546248 - L2 LINE L2 0 3313 3180 605 136 39 13 chr4 8742748 8742903 -175545759 + (TGGA)n Simple_repeat Simple_repeat 4 162 0 228 317 37 0 chr4 8743500 8743582 -175545080 + L2 LINE L2 3188 3272 0 240 255 20 0 chr4 8744753 8744804 -175543858 + C-rich Low_complexity Low_complexity 4 55 0 339 200 88 0 chr4 8744997 8745077 -175543585 - MIR SINE MIR -110 152 66 195 238 79 16 chr4 8745337 8745400 -175543262 + L3 LINE CR1 968 1034 -543 192 300 0 33 chr4 8746115 8746175 -175542487 + L3 LINE CR1 1410 1467 -110 217 339 0 0 chr4 8748842 8748904 -175539758 + MIR SINE MIR 92 153 -55 351 157 0 96 chr4 8749051 8749249 -175539413 + (CAGCC)n Simple_repeat Simple_repeat 2 180 0 384 171 0 67 chr4 8749277 8749470 -175539192 + (CAGCC)n Simple_repeat Simple_repeat 1 180 0 443 141 0 70 chr4 8749515 8749700 -175538962 + (CAGCC)n Simple_repeat Simple_repeat 2 173 0 387 162 0 70 chr4 8749731 8749916 -175538746 + (CAGCC)n Simple_repeat Simple_repeat 2 173 0 769 241 126 27 chr4 8750488 8750917 -175537745 - MLT1C LTR MaLR -17 488 10 1510 271 121 2 chr4 8751237 8751808 -175536854 + L1MC3 LINE L1 7077 7715 -70 263 263 222 0 chr4 8751858 8751957 -175536705 + MIR SINE MIR 14 134 -128 318 127 0 48 chr4 8751966 8752029 -175536633 + L1MD3 LINE L1 7923 7982 -13 195 209 47 0 chr4 8752804 8752847 -175535815 + MIR SINE MIR 14 58 -204 312 127 0 0 chr4 8752987 8753042 -175535620 + (TGAA)n Simple_repeat Simple_repeat 2 56 0 1054 269 73 24 chr4 8753405 8753829 -175534833 - MLT1C LTR MaLR 0 467 23 341 242 87 27 chr4 8754659 8754808 -175533854 + L1ME4a LINE L1 5952 6109 -12 2233 104 7 0 chr4 8754998 8755297 -175533365 - AluSx SINE Alu -11 301 1 365 300 27 9 chr4 8755914 8756024 -175532638 + L2 LINE L2 3201 3312 -1 270 279 0 0 chr4 8756024 8756085 -175532577 - MIR SINE MIR -92 170 110 251 350 8 8 chr4 8756170 8756290 -175532372 - L2 LINE L2 -220 3052 2933 230 359 127 0 chr4 8756329 8756471 -175532191 - MIR SINE MIR -26 236 77 187 239 69 92 chr4 8756507 8756637 -175532025 + L3 LINE CR1 1375 1501 -76 501 225 18 0 chr4 8756934 8757045 -175531617 - MER45 DNA AcHobo -840 113 1 243 0 0 0 chr4 8758581 8758608 -175530054 + (CA)n Simple_repeat Simple_repeat 2 28 0 398 248 28 0 chr4 8758750 8758859 -175529803 - MER45C DNA AcHobo -759 194 83 574 214 6 16 chr4 8760682 8760864 -175527798 + (TGAG)n Simple_repeat Simple_repeat 1 180 0 220 188 42 0 chr4 8760866 8760914 -175527748 + (TGAA)n Simple_repeat Simple_repeat 3 52 0 1071 150 1 6 chr4 8760914 8761708 -175526954 + (TGAG)n Simple_repeat Simple_repeat 1 789 0 204 40 0 0 chr4 8762637 8762662 -175526000 + (A)n Simple_repeat Simple_repeat 1 25 0 378 281 119 24 chr4 8763271 8763481 -175525181 + MIR SINE MIR 31 260 -2 253 352 37 15 chr4 8763939 8764108 -175524554 + MIR SINE MIR 3 172 -68 402 282 22 66 chr4 8764299 8764500 -175524162 + MIR3 SINE MIR 15 206 -56 468 136 0 0 chr4 8765272 8765360 -175523302 + (TGAG)n Simple_repeat Simple_repeat 2 89 0 327 98 0 20 chr4 8765699 8765750 -175522912 + (GGA)n Simple_repeat Simple_repeat 1 50 0 464 371 125 0 chr4 8766891 8767171 -175521491 - L3 LINE CR1 -33 1544 1230 360 274 75 52 chr4 8767348 8767600 -175521062 + L2 LINE L2 2842 3099 -173 1261 246 62 42 chr4 8767843 8768340 -175520322 - MER90 LTR ERV1 0 614 108 310 313 0 0 chr4 8769637 8769717 -175518945 + L2 LINE L2 3211 3290 -23 331 330 19 0 chr4 8769832 8769935 -175518727 - MIR SINE MIR -111 151 47 273 347 28 94 chr4 8770043 8770478 -175518184 - L2 LINE L2 -1 3312 2907 329 281 58 28 chr4 8771823 8772103 -175516559 - L1ME4a LINE L1 -230 5891 5594 300 422 12 12 chr4 8772173 8772334 -175516328 - L1ME4a LINE L1 -637 5484 5324 5556 182 55 36 chr4 8772511 8773939 -175514723 + L1M4c LINE L1 1 1456 -4928 498 139 0 0 chr4 8774056 8774128 -175514534 - AluS SINE Alu -239 73 2 747 179 0 19 chr4 8774130 8774286 -175514376 + L1M4c LINE L1 1445 1597 -4787 474 320 10 10 chr4 8774584 8774778 -175513884 + MLT1J LTR MaLR 23 216 -295 553 345 93 13 chr4 8775045 8775433 -175513229 + L1ME4a LINE L1 5478 5896 -225 2425 59 20 3 chr4 8776184 8776490 -175512172 + AluY SINE Alu 1 311 0 191 323 16 0 chr4 8777443 8777505 -175511157 + L2 LINE L2 3249 3311 -2 450 219 21 20 chr4 8777697 8777828 -175510834 - MIR SINE MIR -43 165 33 227 255 0 0 chr4 8778154 8778205 -175510457 + C-rich Low_complexity Low_complexity 4 54 0 655 169 272 0 chr4 8778225 8778438 -175510224 - MER58D DNA MER1_type 0 386 116 180 343 125 46 chr4 8778874 8779090 -175509572 - L2 LINE L2 -10 3262 3030 453 244 17 9 chr4 8779272 8779387 -175509275 + MIR SINE MIR 6 121 -141 693 298 48 4 chr4 8779637 8779865 -175508797 + MIR SINE MIR 6 243 -19 655 251 184 43 chr4 8780202 8780621 -175508041 + MLT1D LTR MaLR 3 480 -25 530 241 60 79 chr4 8781758 8782023 -175506639 + MLT1D-int LTR MaLR 1112 1371 0 1792 215 36 32 chr4 8782028 8782525 -175506137 + MLT1D LTR MaLR 6 504 -1 251 193 96 36 chr4 8782585 8782668 -175505994 + MIR SINE MIR 174 261 -1 201 224 41 0 chr4 8782683 8782732 -175505930 + MIR SINE MIR 78 128 -134 353 209 228 25 chr4 8783974 8784132 -175504530 - MLT1F1 LTR MaLR -14 535 346 441 293 95 32 chr4 8784158 8784441 -175504221 - MLT1H LTR MaLR -102 447 147 221 282 18 3 chr4 8784533 8784601 -175504061 - MIR SINE MIR -119 89 21 938 214 45 15 chr4 8785026 8785292 -175503370 - L1MB7 LINE L1 -9 6175 5902 234 261 0 0 chr4 8785586 8785632 -175503030 - MIR SINE MIR -106 156 111 348 314 42 0 chr4 8785841 8785959 -175502703 - MIR SINE MIR -90 172 50 316 232 24 0 chr4 8787328 8787410 -175501252 + MIR SINE MIR 61 144 -118 434 275 186 36 chr4 8787575 8787822 -175500840 - L2 LINE L2 0 3272 2989 197 181 28 56 chr4 8788487 8788559 -175500103 - L2 LINE L2 -176 3096 3027 272 278 52 61 chr4 8790094 8790209 -175498453 + L2 LINE L2 3200 3313 0 240 217 83 75 chr4 8792661 8792781 -175495881 + MIR SINE MIR 25 145 -117 453 149 0 0 chr4 8794154 8794228 -175494434 + MIR SINE MIR 71 144 -118 523 273 40 48 chr4 8795536 8795785 -175492877 - MER46C DNA MER2_type -2 336 90 950 177 89 7 chr4 8795859 8796227 -175492435 - MER31A LTR ERV1 -7 478 27 243 241 17 0 chr4 8796520 8796578 -175492084 + MIR SINE MIR 87 145 -63 688 206 265 5 chr4 8796824 8797043 -175491619 - MLT1F1 LTR MaLR -285 282 7 365 306 106 6 chr4 8798222 8798382 -175490280 + L2 LINE L2 2994 3169 -103 181 232 29 0 chr4 8798751 8798820 -175489842 + (TCCA)n Simple_repeat Simple_repeat 1 71 0 867 169 16 0 chr4 8798843 8799151 -175489511 + (TCCA)n Simple_repeat Simple_repeat 1 313 0 281 293 213 32 chr4 8799587 8799935 -175488727 + L2 LINE L2 2859 3269 -3 215 327 52 59 chr4 8799951 8800104 -175488558 - MIR3 SINE MIR -45 163 12 239 156 39 0 chr4 8800236 8800293 -175488369 + MIR SINE MIR 99 157 -62 343 244 62 31 chr4 8801185 8801378 -175487284 - L1ME4a LINE L1 -1 6120 5922 408 277 54 8 chr4 8801770 8801940 -175486722 - MIR3 SINE MIR -46 162 37 228 122 0 0 chr4 8802474 8802515 -175486147 + (CA)n Simple_repeat Simple_repeat 2 42 0 3165 234 71 40 chr4 8802668 8803626 -175485036 + L1MD1 LINE L1 4813 5831 -411 2020 132 0 3 chr4 8803626 8803922 -175484740 + AluSx SINE Alu 1 295 -17 3165 234 71 40 chr4 8803922 8804342 -175484320 + L1MD1 LINE L1 5831 6237 -5 378 107 0 0 chr4 8804474 8804530 -175484132 + (TGG)n Simple_repeat Simple_repeat 1 56 0 218 350 21 43 chr4 8805084 8805224 -175483438 - L2 LINE L2 -453 2861 2725 250 312 37 17 chr4 8805399 8805530 -175483132 + MIR SINE MIR 15 147 -74 1492 127 5 9 chr4 8805828 8806071 -175482591 + AluSg SINE Alu 62 303 0 323 187 80 0 chr4 8806522 8806597 -175482065 + MIR SINE MIR 64 144 -64 228 180 20 40 chr4 8807203 8807253 -175481409 - MIR SINE MIR -56 152 104 191 318 0 35 chr4 8808502 8808587 -175480075 - L2 LINE L2 -254 3018 2937 290 281 39 18 chr4 8809419 8809557 -175479105 - MLT1J1 LTR MaLR -303 143 27 2830 194 71 2 chr4 8809696 8810326 -175478336 + L1MB7 LINE L1 5444 6117 -67 22 0 0 0 chr4 8814695 8814717 -175473945 + AT_rich Low_complexity Low_complexity 1 22 0 1272 241 49 11 chr4 8815566 8815936 -175472726 + L1MB3 LINE L1 5584 5967 -216 769 152 0 43 chr4 8815936 8816074 -175472588 + FLAM_C SINE Alu 2 133 -10 906 148 0 7 chr4 8816116 8816265 -175472397 + L1MB3 LINE L1 6036 6183 0 1753 128 7 15 chr4 8816510 8816783 -175471879 + AluJo SINE Alu 14 284 -28 195 248 194 52 chr4 8817383 8817586 -175471076 + MIR SINE MIR 1 227 -35 1647 166 24 7 chr4 8819475 8819764 -175468898 + AluJb SINE Alu 1 294 -18 250 283 81 52 chr4 8820148 8820321 -175468341 - MIR3 SINE MIR -7 201 24 227 322 116 42 chr4 8821992 8822346 -175466316 - L2 LINE L2 -1321 1993 1614 387 290 131 11 chr4 8822722 8822898 -175465764 + L2 LINE L2 3082 3278 -35 396 223 12 2 chr4 8822902 8822998 -175465664 + FLAM_A SINE Alu 1 83 -50 223 273 38 15 chr4 8823009 8823141 -175465521 + (TA)n Simple_repeat Simple_repeat 1 135 0 191 280 25 0 chr4 8823299 8823352 -175465310 - MIR SINE MIR -68 140 97 1368 262 89 12 chr4 8825004 8825497 -175463165 + MER90 LTR ERV1 84 614 0 381 333 20 41 chr4 8826736 8826982 -175461680 - L2 LINE L2 -825 2489 2249 830 286 92 64 chr4 8827127 8827833 -175460829 - L2 LINE L2 -1449 1865 1140 2387 47 3 10 chr4 8828788 8829087 -175459575 + AluY SINE Alu 1 297 -14 264 241 73 58 chr4 8829326 8829463 -175459199 + HAL1b LINE L1 315 453 -895 2098 320 92 44 chr4 8830451 8830887 -175457775 - ERVL LTR ERVL -2930 2834 2420 2136 121 156 3 chr4 8830887 8831258 -175457404 - MSTA LTR MaLR 0 428 1 2098 320 92 44 chr4 8831258 8832252 -175456410 - ERVL LTR ERVL -3344 2420 1335 2185 68 10 0 chr4 8832580 8832872 -175455790 + AluSq SINE Alu 1 295 -18 198 289 0 0 chr4 8832894 8832946 -175455716 + MIR SINE MIR 189 240 -22 2680 93 8 3 chr4 8833349 8833702 -175454960 + THE1A LTR MaLR 1 355 0 1200 176 15 0 chr4 8837102 8837307 -175451355 + AluJb SINE Alu 84 291 -21 297 308 13 0 chr4 8837711 8837789 -175450873 + L2 LINE L2 3235 3313 0 675 256 92 5 chr4 8837826 8838033 -175450629 + MIR SINE MIR 32 256 -6 243 146 0 0 chr4 8838534 8838575 -175450087 + (TG)n Simple_repeat Simple_repeat 2 42 0 198 402 12 30 chr4 8839896 8840065 -175448597 + L2 LINE L2 3030 3195 -77 424 309 26 7 chr4 8840235 8840387 -175448275 + MIR SINE MIR 34 188 -74 370 296 117 15 chr4 8841797 8841993 -175446669 + MIR SINE MIR 35 250 -12 699 183 9 0 chr4 8842691 8842806 -175445856 + FLAM_A SINE Alu 1 116 -17 2204 102 0 0 chr4 8845306 8845599 -175443063 - AluSx SINE Alu -19 293 1 210 299 13 13 chr4 8847284 8847361 -175441301 + L2 LINE L2 3194 3270 -2 1581 205 3 3 chr4 8847814 8848112 -175440550 + AluJb SINE Alu 1 298 -14 232 176 39 0 chr4 8848877 8848928 -175439734 + MER58A DNA MER1_type 27 79 -28 297 254 45 0 chr4 8848960 8849027 -175439635 + MER58A DNA MER1_type 155 224 0 180 171 0 0 chr4 8849046 8849081 -175439581 - L2 LINE L2 -3 3310 3276 322 158 12 98 chr4 8849183 8849265 -175439397 + MER21B LTR ERV1 1 75 -788 1444 231 60 10 chr4 8849325 8849710 -175438952 + MER21B LTR ERV1 292 695 -168 245 275 66 0 chr4 8851307 8851398 -175437264 - MIR3 SINE MIR -3 205 109 22 0 0 0 chr4 8852600 8852622 -175436040 + AT_rich Low_complexity Low_complexity 1 22 0 280 396 26 13 chr4 8853615 8853769 -175434893 - MIR3 SINE MIR -15 193 38 1790 244 70 52 chr4 8853770 8853839 -175434823 - Charlie1a DNA MER1_type -1404 1357 1291 1609 155 34 30 chr4 8853839 8854135 -175434527 + AluJb SINE Alu 14 310 -2 1790 244 70 52 chr4 8854135 8855351 -175433311 - Charlie1a DNA MER1_type -1470 1291 1 21 57 0 0 chr4 8855426 8855461 -175433201 + AT_rich Low_complexity Low_complexity 1 35 0 860 190 118 10 chr4 8855551 8855746 -175432916 + MER58A DNA MER1_type 1 216 -8 2213 120 0 13 chr4 8856782 8857090 -175431572 - AluJo SINE Alu -8 304 1 2423 62 3 3 chr4 8857678 8857967 -175430695 - AluY SINE Alu 0 311 23 3252 249 69 79 chr4 8858265 8858732 -175429930 + L1MC4 LINE L1 6614 7084 -911 2512 66 3 7 chr4 8858732 8859037 -175429625 + AluY SINE Alu 1 304 -7 2180 116 7 7 chr4 8859042 8859335 -175429327 + AluSx SINE Alu 1 293 -19 3252 249 69 79 chr4 8859335 8860316 -175428346 + L1MC4 LINE L1 7088 7994 -1 278 329 74 27 chr4 8861345 8861494 -175427168 - MIR3 SINE MIR -49 159 4 469 272 159 20 chr4 8863265 8863460 -175425202 + L3 LINE CR1 1233 1454 -123 674 168 0 0 chr4 8864087 8864206 -175424456 + FLAM_A SINE Alu 24 142 0 210 333 0 14 chr4 8864697 8864766 -175423896 - MIR SINE MIR -62 146 79 2336 64 0 30 chr4 8864897 8865193 -175423469 - AluY SINE Alu -4 307 21 557 238 0 0 chr4 8867338 8867464 -175421198 - FLAM_A SINE Alu -7 126 1 180 296 0 0 chr4 8867559 8867603 -175421059 - MIR3 SINE MIR -3 205 162 216 306 109 34 chr4 8867789 8867936 -175420726 - MIR SINE MIR -16 246 89 295 266 85 11 chr4 8867946 8868040 -175420622 - L2 LINE L2 -7 3306 3206 379 351 20 0 chr4 8869258 8869406 -175419256 + MIR3 SINE MIR 30 180 -28 2000 169 54 12 chr4 8870888 8871295 -175417367 + MSTB LTR MaLR 1 424 -2 1233 67 0 0 chr4 8871324 8871489 -175417173 - L1PA2 LINE L1 0 6155 5991 2050 133 3 13 chr4 8872126 8872427 -175416235 - AluJb SINE Alu -14 298 1 223 320 64 0 chr4 8872428 8872506 -175416156 - L2 LINE L2 -5 3308 3226 317 299 146 18 chr4 8872576 8872740 -175415922 - L2 LINE L2 -253 3060 2876 371 301 114 5 chr4 8872839 8873058 -175415604 + Charlie8 DNA MER1_type 1 243 -2174 804 241 97 0 chr4 8873882 8874119 -175414543 + MLT1B LTR MaLR 131 390 0 2878 84 7 5 chr4 8875141 8875567 -175413095 + L1P5 LINE L1 5365 5791 -360 229 161 0 0 chr4 8875560 8875616 -175413046 + L1MC4 LINE L1 6648 6703 -1339 * 303 191 0 0 chr4 8875618 8875681 -175412981 + (TA)n Simple_repeat Simple_repeat 1 63 0 2532 80 14 11 chr4 8875681 8876042 -175412620 + L1PB1 LINE L1 5782 6143 -8 34 42 0 0 chr4 8876073 8876121 -175412541 + AT_rich Low_complexity Low_complexity 1 48 0 1992 113 0 0 chr4 8876788 8877045 -175411617 - AluSq SINE Alu -56 257 1 1844 149 13 17 chr4 8877049 8877350 -175411312 - AluJb SINE Alu -12 300 1 1277 216 47 40 chr4 8878000 8878490 -175410172 + MER51C LTR ERV1 3 536 -104 1928 108 0 0 chr4 8878861 8879110 -175409552 - AluSg SINE Alu -61 249 1 675 205 13 0 chr4 8879111 8879262 -175409400 + L1MB5 LINE L1 6021 6173 -1 1286 124 47 0 chr4 8879266 8879500 -175409162 + L1MB3 LINE L1 5934 6178 -5 368 115 0 0 chr4 8879588 8879649 -175409013 + L1MC2 LINE L1 6271 6331 -13 192 118 0 0 chr4 8879745 8879754 -175408908 + (TTAGGG)n Simple_repeat Simple_repeat 2 10 -25 7104 43 0 2 chr4 8879754 8881249 -175407413 + L1PA5 LINE L1 4662 6154 0 192 118 0 0 chr4 8881249 8881273 -175407389 + (TTAGGG)n Simple_repeat Simple_repeat 9 35 0 1671 175 83 6 chr4 8881366 8881714 -175406948 - MLT1E2 LTR MaLR -6 620 246 21 0 0 0 chr4 8881721 8881742 -175406920 + GC_rich Low_complexity Low_complexity 1 21 0 739 184 20 169 chr4 8881772 8882115 -175406547 - MLT1E2 LTR MaLR -334 292 1 2297 97 0 3 chr4 8882514 8882813 -175405849 - AluSx SINE Alu -14 298 1 1620 86 16 19 chr4 8883508 8883764 -175404898 - MER51C LTR ERV1 -1 639 385 471 308 73 89 chr4 8883871 8884420 -175404242 + L1M4 LINE L1 2754 3408 -2738 388 293 27 20 chr4 8884505 8884652 -175404010 + L2 LINE L2 3125 3272 0 199 307 35 18 chr4 8884956 8885070 -175403592 + L2 LINE L2 2874 2989 -324 183 340 85 0 chr4 8885251 8885345 -175403317 + L2 LINE L2 3165 3266 -47 395 347 62 12 chr4 8885790 8886032 -175402630 + L3 LINE CR1 1218 1471 -106 246 240 0 0 chr4 8886285 8886335 -175402327 + L1ME4a LINE L1 5697 5746 -2062 264 286 36 0 chr4 8886337 8886421 -175402241 + L2 LINE L2 3162 3248 -65 2253 132 0 0 chr4 8886535 8886846 -175401816 + AluSx SINE Alu 1 311 -1 278 291 43 8 chr4 8886900 8887017 -175401645 + L1ME4a LINE L1 5998 6118 -3 263 317 0 10 chr4 8887598 8887702 -175400960 + L3 LINE CR1 1419 1521 -56 188 228 123 0 chr4 8888085 8888142 -175400520 + MIR SINE MIR 52 115 -147 313 221 0 12 chr4 8888510 8888596 -175400066 - MIR SINE MIR -139 123 39 2242 128 7 0 chr4 8888662 8888968 -175399694 - AluSx SINE Alu 0 312 5 403 250 46 9 chr4 8889559 8889667 -175398995 - MIR3 SINE MIR -14 194 83 317 237 10 10 chr4 8889826 8889923 -175398739 + MIR SINE MIR 39 135 -127 790 271 34 78 chr4 8890228 8890641 -175398021 - L2 LINE L2 0 3313 2919 235 194 328 0 chr4 8891322 8891389 -175397273 + MIR SINE MIR 38 126 -82 * 491 276 24 35 chr4 8891388 8891558 -175397104 - L3 LINE CR1 -2 1575 1408 408 287 89 0 chr4 8891605 8891750 -175396912 + MIR SINE MIR 34 192 -62 2867 134 8 102 chr4 8892025 8892116 -175396546 - L1MB3 LINE L1 -1 6182 6084 1573 187 61 0 chr4 8892116 8892394 -175396268 + AluJo SINE Alu 1 295 -17 2867 134 8 102 chr4 8892394 8892410 -175396252 - L1MB3 LINE L1 -99 6084 6068 2382 101 0 0 chr4 8892410 8892706 -175395956 + AluSx SINE Alu 1 296 -16 2460 97 0 0 chr4 8892708 8893019 -175395643 + AluY SINE Alu 1 311 0 2867 134 8 102 chr4 8893019 8893309 -175395353 - L1MB3 LINE L1 -116 6067 5863 1830 132 40 0 chr4 8893309 8893582 -175395080 - AluJb SINE Alu -17 295 12 2867 134 8 102 chr4 8893582 8893829 -175394833 - L1MB3 LINE L1 -320 5863 5594 873 118 67 0 chr4 8893831 8893950 -175394712 - AluJo SINE Alu -177 135 9 405 185 32 140 chr4 8893962 8894100 -175394562 - L1MB3 LINE L1 -585 5598 5477 261 0 0 0 chr4 8894100 8894129 -175394533 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 405 185 32 140 chr4 8894129 8894147 -175394515 - L1MB3 LINE L1 -706 5477 5459 2374 82 3 10 chr4 8895071 8895376 -175393286 + AluSp SINE Alu 1 303 -10 27 29 0 0 chr4 8897193 8897227 -175391435 + AT_rich Low_complexity Low_complexity 1 34 0 2563 72 0 0 chr4 8897227 8897533 -175391129 + AluY SINE Alu 1 306 -5 278 238 188 0 chr4 8897794 8897895 -175390767 + MIR SINE MIR 34 153 -55 212 281 22 45 chr4 8897995 8898025 -175390637 - MIR SINE MIR -70 192 163 2002 144 0 26 chr4 8898025 8898337 -175390325 - AluJo SINE Alu -8 304 1 212 281 22 45 chr4 8898337 8898395 -175390267 - MIR SINE MIR -99 163 106 244 281 34 22 chr4 8898453 8898542 -175390120 + L1ME4a LINE L1 5963 6052 -69 1202 144 0 11 chr4 8898555 8898742 -175389920 - AluSg/x SINE Alu -6 304 120 242 337 47 0 chr4 8899054 8899140 -175389522 + L2 LINE L2 3143 3232 -40 2105 141 0 3 chr4 8900832 8901145 -175387517 + AluJb SINE Alu 1 312 0 280 216 72 36 chr4 8901203 8901314 -175387348 - MIR3 SINE MIR -7 201 87 354 232 149 66 chr4 8901827 8902068 -175386594 + L1MC5 LINE L1 7494 7754 -207 481 128 26 0 chr4 8902102 8902180 -175386482 + AluSc SINE Alu 214 293 -16 909 194 23 60 chr4 8902180 8902396 -175386266 - LTR8A LTR ERV1 -243 484 277 1152 140 0 0 chr4 8902510 8902688 -175385974 + MER41C LTR ERV1 377 554 0 1573 153 8 4 chr4 8905194 8905435 -175383227 - AluJb SINE Alu -45 267 26 1657 147 39 70 chr4 8905559 8905710 -175382952 + AluJb SINE Alu 1 138 -174 2037 110 43 3 chr4 8905710 8905992 -175382670 + AluSx SINE Alu 1 293 -19 1657 147 39 70 chr4 8905992 8906152 -175382510 + AluJb SINE Alu 138 302 -10 210 222 44 0 chr4 8906329 8906374 -175382288 + MIR3 SINE MIR 108 154 -54 1905 157 3 0 chr4 8906386 8906686 -175381976 + AluJo SINE Alu 1 301 -11 2307 83 3 25 chr4 8906827 8907141 -175381521 - AluY SINE Alu -4 307 1 3432 135 19 19 chr4 8908472 8909041 -175379621 + L1MB4 LINE L1 5588 6156 -24 1908 133 77 17 chr4 8909054 8909406 -175379256 + THE1C LTR MaLR 1 373 -2 2095 128 0 6 chr4 8909935 8910247 -175378415 - AluSq SINE Alu -3 310 1 2312 65 0 20 chr4 8910754 8911069 -175377593 + AluY SINE Alu 1 311 0 1290 134 0 0 chr4 8911069 8911248 -175377414 + AluSg/x SINE Alu 134 312 0 1507 159 25 70 chr4 8911289 8911603 -175377059 + AluJo SINE Alu 1 300 -12 345 24 0 0 chr4 8911604 8911646 -175377016 + (GGAA)n Simple_repeat Simple_repeat 2 43 0 314 227 21 31 chr4 8911657 8911754 -175376908 + L1ME4a LINE L1 5966 6061 -60 1238 155 9 31 chr4 8912721 8912931 -175375731 + AluJo SINE Alu 86 292 -20 2434 85 0 0 chr4 8912931 8913237 -175375425 + AluSg SINE Alu 1 306 -4 1238 155 9 31 chr4 8913237 8913252 -175375410 + AluJo SINE Alu 292 306 -6 2162 96 10 3 chr4 8913405 8913698 -175374964 + AluSq SINE Alu 1 295 -18 298 278 38 105 chr4 8914197 8914406 -175374256 + MIR SINE MIR 57 251 -11 181 152 0 0 chr4 8915371 8915404 -175373258 + L2 LINE L2 3021 3053 -260 2275 93 0 35 chr4 8916707 8917019 -175371643 - AluSq SINE Alu -12 301 1 278 239 176 28 chr4 8917177 8917353 -175371309 - MIR SINE MIR -33 229 28 2335 99 3 0 chr4 8917791 8918094 -175370568 - AluSx SINE Alu -8 304 1 1685 137 56 14 chr4 8918701 8918869 -175369793 - AluJb SINE Alu -15 297 111 180 0 0 0 chr4 8918869 8918889 -175369773 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1685 137 56 14 chr4 8918889 8919005 -175369657 - AluJb SINE Alu -201 111 1 272 255 122 20 chr4 8919273 8919371 -175369291 - MIR SINE MIR -131 131 24 230 146 73 0 chr4 8919546 8919557 -175369105 + (CAGAA)n Simple_repeat Simple_repeat 1 10 -358 2155 110 3 7 chr4 8919557 8919847 -175368815 + AluSq SINE Alu 1 289 -24 230 146 73 0 chr4 8919847 8919889 -175368773 + (CAGAA)n Simple_repeat Simple_repeat 10 368 0 717 298 9 0 chr4 8919925 8920140 -175368522 + MIR SINE MIR 40 256 -6 215 258 21 43 chr4 8920314 8920407 -175368255 + MIR3 SINE MIR 112 202 -6 29 0 0 0 chr4 8920424 8920453 -175368209 + AT_rich Low_complexity Low_complexity 1 29 0 283 109 0 0 chr4 8920453 8920499 -175368163 - AluSc SINE Alu 0 299 254 466 37 0 111 chr4 8920599 8920680 -175367982 + L1PA2 LINE L1 6084 6155 0 492 283 28 28 chr4 8921360 8921611 -175367051 + L1MCa LINE L1 1404 1654 -4772 * 836 88 1 33 chr4 8921592 8921730 -175366932 + L1PB1 LINE L1 5659 5791 -360 417 241 0 0 chr4 8921731 8921843 -175366819 + (TA)n Simple_repeat Simple_repeat 2 113 0 2515 106 11 16 chr4 8921843 8922220 -175366442 + L1PB1 LINE L1 5776 6150 -1 304 222 21 0 chr4 8922241 8922317 -175366345 + L1M1 LINE L1 2887 3288 -4278 1240 180 171 59 chr4 8922317 8922673 -175365989 + MSTD LTR MaLR 1 396 0 559 199 85 50 chr4 8922729 8922930 -175365732 + L1MCa LINE L1 2039 2246 -4361 307 248 8 26 chr4 8922939 8923056 -175365606 + L1M1 LINE L1 3557 3671 -3894 5843 170 21 24 chr4 8923177 8924991 -175363671 - L1PA16 LINE L1 -1 6165 4367 2266 113 0 0 chr4 8925027 8925328 -175363334 - AluSg1 SINE Alu -8 301 1 2772 229 132 21 chr4 8925383 8925934 -175362728 + L1M1 LINE L1 3661 4149 -3416 1762 98 8 16 chr4 8925934 8926178 -175362484 + AluY SINE Alu 1 242 -69 2772 229 132 21 chr4 8926178 8926867 -175361795 + L1M1 LINE L1 4149 5110 -2455 2521 56 3 3 chr4 8926867 8927169 -175361493 + AluY SINE Alu 1 302 -9 2772 229 132 21 chr4 8927169 8927263 -175361399 + L1M1 LINE L1 5110 5192 -2373 182 314 64 71 chr4 8928648 8928788 -175359874 + MIR3 SINE MIR 3 141 -67 1158 79 0 0 chr4 8929320 8929472 -175359190 + AluY SINE Alu 160 311 0 2223 109 0 7 chr4 8929612 8929914 -175358748 - AluSx SINE Alu -12 300 1 26 64 0 0 chr4 8930329 8930376 -175358286 + AT_rich Low_complexity Low_complexity 1 47 0 2245 116 0 10 chr4 8930511 8930814 -175357848 + AluSx SINE Alu 1 300 -12 1201 188 127 68 chr4 8931423 8931820 -175356842 - L1M4 LINE L1 -1479 4667 4141 2149 194 124 10 chr4 8931821 8932330 -175356332 - Cheshire DNA MER1_type -299 2121 1555 505 122 0 0 chr4 8932584 8932658 -175356004 + AluS SINE Alu 3 76 -234 285 271 156 65 chr4 8933046 8933386 -175355276 + MLT1K LTR MaLR 184 554 -34 2031 135 10 0 chr4 8934256 8934553 -175354109 - AluSx SINE Alu -12 300 1 198 0 0 0 chr4 8934650 8934672 -175353990 + (A)n Simple_repeat Simple_repeat 1 22 0 1978 149 0 0 chr4 8934921 8935210 -175353452 + AluJb SINE Alu 11 299 -13 288 191 135 11 chr4 8935212 8935301 -175353361 - HAL1 LINE L1 -871 1636 1537 5072 64 0 5 chr4 8935463 8936103 -175352559 + L1PA6 LINE L1 5518 6154 0 1544 235 131 22 chr4 8936207 8936658 -175352004 + MLT1H1 LTR MaLR 43 542 -13 22 0 0 0 chr4 8936813 8936835 -175351827 + AT_rich Low_complexity Low_complexity 1 22 0 800 142 40 0 chr4 8937338 8937486 -175351176 + FRAM SINE Alu 22 175 -1 284 274 65 40 chr4 8937487 8937611 -175351051 - MIR SINE MIR -134 128 2 1797 128 0 4 chr4 8937912 8938162 -175350500 - AluJb SINE Alu -4 308 60 565 261 68 54 chr4 8938818 8938920 -175349742 - L2 LINE L2 -4 3309 3210 2334 97 0 0 chr4 8938920 8939218 -175349444 + AluSx SINE Alu 1 298 -14 565 261 68 54 chr4 8939218 8939395 -175349267 - L2 LINE L2 -103 3210 3026 524 197 146 0 chr4 8939866 8940003 -175348659 + L1ME3A LINE L1 6009 6165 -5 2470 77 0 13 chr4 8940215 8940527 -175348135 + AluSg SINE Alu 1 308 -2 238 229 16 33 chr4 8940618 8940679 -175347983 + MLT1K LTR MaLR 59 118 -470 2151 122 10 3 chr4 8940862 8941165 -175347497 + AluSx SINE Alu 1 305 -7 421 278 96 32 chr4 8941283 8941470 -175347192 + MIR SINE MIR 64 262 0 1492 276 128 25 chr4 8942089 8942796 -175345866 + L1MC4 LINE L1 7038 7951 -91 1234 175 44 0 chr4 8942796 8943070 -175345592 + L1MA4 LINE L1 6012 6297 -3 1492 276 128 25 chr4 8943070 8943173 -175345489 + L1MC4 LINE L1 7951 8042 0 1155 168 34 10 chr4 8943179 8943387 -175345275 - AluJb SINE Alu -16 296 84 1257 159 48 0 chr4 8944858 8945066 -175343596 + AluJo SINE Alu 85 302 -10 1010 114 0 0 chr4 8945476 8945608 -175343054 + FRAM SINE Alu 22 153 -23 246 105 0 0 chr4 8945958 8945996 -175342666 + (TC)n Simple_repeat Simple_repeat 1 38 0 1810 143 11 25 chr4 8946014 8946300 -175342362 - AluJb SINE Alu -30 282 1 24 0 0 0 chr4 8947415 8947439 -175341223 + AT_rich Low_complexity Low_complexity 1 24 0 716 237 6 34 chr4 8947557 8947734 -175340928 + FAM SINE Alu 2 173 -2 5723 17 0 2 chr4 8948131 8948768 -175339894 + L1PA3 LINE L1 5497 6132 -23 803 106 15 0 chr4 8948894 8949026 -175339636 + (TTTC)n Simple_repeat Simple_repeat 3 136 0 1831 106 0 0 chr4 8949038 8949275 -175339387 - AluSx SINE Alu -75 237 1 2852 145 19 0 chr4 8949300 8949770 -175338892 - L1MB3 LINE L1 -5 6178 5700 1876 157 3 19 chr4 8949775 8950088 -175338574 - AluJo SINE Alu -4 308 1 460 299 95 4 chr4 8950207 8950438 -175338224 - MIR SINE MIR -3 259 8 446 238 180 12 chr4 8951348 8951520 -175337142 - MIR SINE MIR -14 248 48 731 138 8 8 chr4 8951699 8951822 -175336840 + MLT1D LTR MaLR 9 131 -374 236 317 118 42 chr4 8951978 8952284 -175336378 + L2 LINE L2 2920 3248 -24 539 273 0 0 chr4 8952801 8952933 -175335729 - MIR SINE MIR -116 146 15 194 286 14 0 chr4 8953175 8953245 -175335417 - MIR SINE MIR -92 116 46 387 259 45 9 chr4 8953551 8953663 -175334999 + MIR SINE MIR 29 144 -64 817 211 0 87 chr4 8953835 8954043 -175334619 + MIR SINE MIR 33 222 -40 323 255 170 0 chr4 8955013 8955107 -175333555 + MIR SINE MIR 34 143 -65 1614 166 29 37 chr4 8956131 8956481 -175332181 + MLT2C1 LTR ERVL 1 347 -50 2637 43 0 0 chr4 8956484 8956785 -175331877 + AluY SINE Alu 1 301 -10 900 184 6 12 chr4 8956785 8956948 -175331714 + AluJb SINE Alu 134 295 -17 266 221 116 0 chr4 8956956 8957042 -175331620 - L2 LINE L2 -274 2998 2903 402 289 177 15 chr4 8957461 8957721 -175330941 - L2 LINE L2 -654 2660 2359 703 272 42 89 chr4 8957811 8958171 -175330491 - MLT1J LTR MaLR -163 348 6 1643 179 3 35 chr4 8958703 8959025 -175329637 - AluJb SINE Alu 0 313 1 293 253 103 11 chr4 8959259 8959346 -175329316 - MIR SINE MIR -89 173 79 483 225 42 7 chr4 8959503 8959645 -175329017 - L1ME2 LINE L1 -74 6090 5944 250 175 53 35 chr4 8959658 8959736 -175328926 - AluYb8 SINE Alu 0 321 243 * 296 133 0 0 chr4 8959713 8959758 -175328904 - Alu SINE Alu -258 45 1 1700 160 43 69 chr4 8960501 8960720 -175327942 - MLT1A1 LTR MaLR 0 365 159 2304 98 0 7 chr4 8960720 8961027 -175327635 - AluSc SINE Alu -4 305 1 1700 160 43 69 chr4 8961027 8961182 -175327480 - MLT1A1 LTR MaLR -206 159 1 370 279 31 8 chr4 8961207 8961336 -175327326 - MLT1G LTR MaLR -449 141 10 229 234 0 0 chr4 8961361 8961408 -175327254 - MIR SINE MIR 0 262 216 366 150 87 0 chr4 8961682 8961809 -175326853 + (CCTG)n Simple_repeat Simple_repeat 3 140 0 218 350 162 5 chr4 8962743 8962940 -175325722 + MIR SINE MIR 28 255 -7 274 316 64 22 chr4 8963583 8963712 -175324950 + MIR SINE MIR 24 141 -67 669 242 42 9 chr4 8963722 8963937 -175324725 - HAL1 LINE L1 -1270 1237 1016 265 266 21 43 chr4 8964024 8964118 -175324544 - HAL1 LINE L1 -1966 541 450 552 236 205 0 chr4 8964303 8964498 -175324164 + MLT1H1 LTR MaLR 308 542 -13 292 225 28 14 chr4 8965238 8965309 -175323353 + MIR SINE MIR 80 151 -111 1588 184 9 35 chr4 8965385 8965700 -175322962 - AluJb SINE Alu -3 309 3 2408 64 7 13 chr4 8966160 8966458 -175322204 + AluSc SINE Alu 1 296 -13 235 274 84 22 chr4 8966470 8966696 -175321966 + L1ME2 LINE L1 5708 5947 -217 221 306 116 41 chr4 8967197 8967344 -175321318 + L2 LINE L2 2264 2421 -893 1014 125 79 0 chr4 8967346 8967498 -175321164 - AluSg/x SINE Alu -15 297 134 2039 128 21 0 chr4 8967498 8967788 -175320874 - AluSx SINE Alu -16 296 1 537 273 133 60 chr4 8967791 8968176 -175320486 + L2 LINE L2 2418 2830 -484 198 333 15 0 chr4 8968322 8968388 -175320274 + MIR SINE MIR 195 261 -1 1897 170 39 0 chr4 8968455 8968785 -175319877 + MER2 DNA MER2_type 2 344 0 23 0 0 0 chr4 8970030 8970053 -175318609 + AT_rich Low_complexity Low_complexity 1 23 0 2009 128 59 6 chr4 8970505 8970825 -175317837 - MER1B DNA MER1_type 0 337 1 216 234 21 0 chr4 8970895 8970942 -175317720 - L2 LINE L2 -2 3270 3223 724 149 14 61 chr4 8971635 8971783 -175316879 + FLAM_C SINE Alu 2 142 -1 2258 113 19 10 chr4 8972392 8972701 -175315961 + AluSx SINE Alu 1 312 0 1383 55 0 6 chr4 8972888 8973053 -175315609 + AluY SINE Alu 1 164 -147 325 189 20 40 chr4 8973239 8973595 -175315067 + (TG)n Simple_repeat Simple_repeat 1 348 0 637 118 16 53 chr4 8973645 8973832 -175314830 + (TG)n Simple_repeat Simple_repeat 1 180 0 549 203 206 103 chr4 8974612 8974893 -175313769 - MLT1G LTR MaLR -66 524 220 321 241 36 0 chr4 8975044 8975127 -175313535 - MIR3 SINE MIR -42 166 81 183 305 21 53 chr4 8975514 8975609 -175313053 + L2 LINE L2 2738 2829 -485 2186 182 35 7 chr4 8976226 8976683 -175311979 + L1MB3 LINE L1 5714 6183 0 409 267 0 19 chr4 8976778 8976883 -175311779 - MIR SINE MIR -96 166 64 219 88 0 0 chr4 8977148 8977182 -175311480 + (CA)n Simple_repeat Simple_repeat 2 35 0 342 45 0 0 chr4 8977304 8977348 -175311314 + (TG)n Simple_repeat Simple_repeat 2 45 0 2209 116 0 0 chr4 8977348 8977633 -175311029 - AluSq SINE Alu -28 285 1 231 61 0 0 chr4 8977788 8977821 -175310841 + (GA)n Simple_repeat Simple_repeat 1 33 0 311 297 95 34 chr4 8978397 8978545 -175310117 - L2 LINE L2 -2 3311 3155 2121 123 0 3 chr4 8979119 8979412 -175309250 - AluJo SINE Alu -17 295 4 634 227 64 36 chr4 8980078 8980298 -175308364 - L2 LINE L2 -529 2785 2560 1808 98 84 42 chr4 8980354 8980641 -175308021 - AluY SINE Alu -12 299 1 2535 50 0 40 chr4 8981173 8981496 -175307166 + AluY SINE Alu 1 310 -1 21 0 0 0 chr4 8981887 8981908 -175306754 + AT_rich Low_complexity Low_complexity 1 21 0 713 149 18 0 chr4 8982141 8982255 -175306407 + FLAM_A SINE Alu 1 116 -17 23 0 0 0 chr4 8982862 8982885 -175305777 + GC_rich Low_complexity Low_complexity 1 23 0 213 211 0 18 chr4 8982894 8982951 -175305711 + (CGCGG)n Simple_repeat Simple_repeat 4 59 0 242 356 12 6 chr4 8983145 8983305 -175305357 + (CG)n Simple_repeat Simple_repeat 1 161 0 478 271 41 58 chr4 8983348 8983541 -175305121 - L1ME3 LINE L1 0 6313 6009 518 309 6 12 chr4 8983873 8984035 -175304627 + MLT1F1-int LTR MaLR 701 861 -510 444 245 15 110 chr4 8984320 8984520 -175304142 + MLT1F1-int LTR MaLR 1107 1287 -84 434 246 22 93 chr4 8984642 8984825 -175303837 + MLT1F1 LTR MaLR 3 172 -370 574 184 0 0 chr4 8984839 8984937 -175303725 + MER4A LTR ERV1 1 98 -566 272 180 20 0 chr4 8984939 8984989 -175303673 + MER4A LTR ERV1 263 313 -351 2082 116 14 0 chr4 8985016 8985320 -175303342 + AluSx SINE Alu 3 310 0 186 43 0 0 chr4 8985326 8985349 -175303313 + (GAAA)n Simple_repeat Simple_repeat 2 24 0 1641 112 0 92 chr4 8985349 8985653 -175303009 + MER4A LTR ERV1 389 664 0 930 218 102 9 chr4 8985654 8985879 -175302783 + MLT1F1 LTR MaLR 201 446 -121 1725 151 20 87 chr4 8985892 8985961 -175302701 + MLT1A1 LTR MaLR 1 73 -292 2818 118 34 0 chr4 8985961 8986375 -175302287 + MSTA LTR MaLR 1 428 0 1725 151 20 87 chr4 8986375 8986469 -175302193 + MLT1A1 LTR MaLR 73 172 -193 1597 172 34 30 chr4 8986469 8986766 -175301896 + AluJo SINE Alu 1 298 -14 1725 151 20 87 chr4 8986766 8986778 -175301884 + MLT1A1 LTR MaLR 172 183 -182 2415 96 0 0 chr4 8986778 8987079 -175301583 + AluSq SINE Alu 1 301 -12 1725 151 20 87 chr4 8987079 8987292 -175301370 + MLT1A1 LTR MaLR 183 365 0 261 206 82 27 chr4 8987292 8987356 -175301306 + MLT1F1 LTR MaLR 496 563 -4 2009 222 38 12 chr4 8987377 8987610 -175301052 - L1ME LINE L1 -384 5778 5552 1315 193 60 83 chr4 8987610 8988009 -175300653 + MLT1B LTR MaLR 1 390 0 2009 222 38 12 chr4 8988009 8988370 -175300292 - L1ME LINE L1 -610 5552 5167 261 350 87 0 chr4 8988644 8988747 -175299915 - L2 LINE L2 -17 3255 3144 257 190 76 38 chr4 8989062 8989141 -175299521 + MIR SINE MIR 160 241 -21 380 301 81 43 chr4 8992748 8992934 -175295728 - MLT1I LTR MaLR 0 409 217 263 281 37 0 chr4 8993012 8993094 -175295568 + (CATA)n Simple_repeat Simple_repeat 3 87 0 313 307 64 42 chr4 8993317 8993581 -175295081 - HsTC2 DNA Tc2 -1133 765 496 859 284 153 6 chr4 8993627 8993947 -175294715 + L2 LINE L2 2947 3313 0 337 280 272 29 chr4 8994017 8994260 -175294402 + L2 LINE L2 2442 2743 -571 549 231 30 30 chr4 8994289 8994458 -175294204 - L2 LINE L2 -1 3312 3144 3173 202 36 11 chr4 8994839 8995474 -175293188 + MER82 DNA MER2_type 1 651 -2 360 59 0 0 chr4 8995672 8995723 -175292939 + (TTTA)n Simple_repeat Simple_repeat 2 52 0 2041 237 15 46 chr4 8996079 8996686 -175291976 + L1MC4 LINE L1 6518 7105 -937 304 182 15 0 chr4 8996665 8996731 -175291931 + L1MC4a LINE L1 7158 7224 -584 * 502 241 97 14 chr4 8996724 8996736 -175291926 + L1MC4 LINE L1 7687 7697 -345 2282 108 3 0 chr4 8996736 8997032 -175291630 + AluSx SINE Alu 1 297 -15 502 241 97 14 chr4 8997032 8997226 -175291436 + L1MC4 LINE L1 7697 7910 -132 1982 115 10 20 chr4 8997292 8997597 -175291065 + AluSx SINE Alu 1 302 -10 2365 68 0 0 chr4 8997885 8998223 -175290439 + AluSx SINE Alu 1 312 0 1773 184 48 39 chr4 8998226 8998661 -175290001 + L1MB2 LINE L1 5731 6169 -2 761 169 15 0 chr4 8998740 8998870 -175289792 + AluJb SINE Alu 2 133 -179 329 247 43 99 chr4 8998879 8999041 -175289621 + L1ME LINE L1 5675 5827 -294 1973 161 0 13 chr4 8999044 8999360 -175289302 + AluJo SINE Alu 1 312 0 304 263 61 26 chr4 8999905 9000019 -175288643 - LTR67 LTR ERVL -331 226 109 836 160 8 0 chr4 9000111 9000236 -175288426 + AluJo/FLAM SINE Alu 1 126 -186 1922 114 0 67 chr4 9000237 9000553 -175288109 + AluY SINE Alu 1 295 -16 436 221 0 0 chr4 9000553 9000639 -175288023 + AluJ/FRAM SINE Alu 218 303 -9 2544 70 0 0 chr4 9001158 9001460 -175287202 + AluY SINE Alu 3 304 -7 2252 99 0 7 chr4 9001477 9001770 -175286892 + AluSq SINE Alu 6 296 -17 255 304 22 11 chr4 9002889 9002981 -175285681 - MIR SINE MIR -69 139 47 2076 141 0 3 chr4 9004047 9004360 -175284302 + AluJb SINE Alu 1 312 0 280 306 0 24 chr4 9004492 9004577 -175284085 + GA-rich Low_complexity Low_complexity 5 87 0 1660 206 73 23 chr4 9005937 9006500 -175282162 - MER39B LTR ERV1 -4 649 1 374 356 0 0 chr4 9007112 9007216 -175281446 + L1MC4 LINE L1 6600 6703 -1339 358 186 43 0 chr4 9007155 9007225 -175281437 - L1MCa LINE L1 -4358 2068 1996 * 261 163 0 0 chr4 9007226 9007275 -175281387 + (CATATA)n Simple_repeat Simple_repeat 6 54 0 216 0 0 0 chr4 9007278 9007302 -175281360 + (TTTG)n Simple_repeat Simple_repeat 1 24 0 1207 115 82 0 chr4 9007303 9007486 -175281176 - AluSg/x SINE Alu -32 278 81 2156 109 3 0 chr4 9007505 9007818 -175280844 - AluSx SINE Alu 0 314 1 981 167 0 0 chr4 9007821 9007983 -175280679 - FRAM SINE Alu -16 160 1 2231 83 10 0 chr4 9008313 9008602 -175280060 + AluSx SINE Alu 12 303 -9 246 325 48 0 chr4 9009808 9009891 -175278771 - MIR3 SINE MIR -30 178 92 1399 248 117 7 chr4 9010401 9010821 -175277841 - MLT1C LTR MaLR -1 466 1 227 343 59 59 chr4 9010889 9011093 -175277569 + MIR SINE MIR 41 244 -18 461 321 31 5 chr4 9011177 9011373 -175277289 - L2 LINE L2 -96 3176 2976 1640 192 35 66 chr4 9011485 9011907 -175276755 + LTR2 LTR ERV1 41 449 0 875 121 0 0 chr4 9012680 9012804 -175275858 + FLAM_C SINE Alu 9 132 -11 334 294 37 28 chr4 9012993 9013102 -175275560 + MIR3 SINE MIR 61 170 -38 364 186 202 23 chr4 9013598 9013727 -175274935 + MIR SINE MIR 33 184 -78 1565 180 109 3 chr4 9013765 9014131 -175274531 + MLT2C2 LTR ERVL 5 409 -55 180 0 0 0 chr4 9014178 9014198 -175274464 + (CA)n Simple_repeat Simple_repeat 1 20 0 2176 108 0 0 chr4 9015098 9015393 -175273269 + AluSx SINE Alu 1 295 -17 1431 115 161 31 chr4 9015407 9015667 -175272995 - AluJo SINE Alu -18 294 1 188 345 138 29 chr4 9016039 9016213 -175272449 + L2 LINE L2 3031 3223 -49 361 315 12 43 chr4 9016610 9016772 -175271890 - L1M4 LINE L1 -2170 3976 3820 2220 89 23 3 chr4 9016794 9017097 -175271565 - AluSx SINE Alu -3 309 1 269 346 24 39 chr4 9017165 9017292 -175271370 - MIR SINE MIR -72 190 66 315 288 79 28 chr4 9018522 9018699 -175269963 + L2 LINE L2 1621 1806 -1508 359 276 0 29 chr4 9018725 9018830 -175269832 - L2 LINE L2 -345 2968 2867 431 344 58 0 chr4 9018910 9019064 -175269598 + HAL1 LINE L1 1470 1632 -875 263 351 192 0 chr4 9019583 9019734 -175268928 - MIR3 SINE MIR -13 195 16 2331 92 0 0 chr4 9019988 9020293 -175268369 - AluY SINE Alu -6 305 1 214 370 71 61 chr4 9020297 9020608 -175268054 + L2 LINE L2 2959 3272 0 2778 22 0 0 chr4 9020952 9021270 -175267392 + AluYb8 SINE Alu 1 318 0 234 206 103 0 chr4 9021399 9021467 -175267195 + MIR SINE MIR 122 196 -66 366 218 0 30 chr4 9022005 9022106 -175266556 - MER94 DNA DNA -21 113 16 194 299 133 52 chr4 9022306 9022651 -175266011 + L2 LINE L2 2808 3180 -133 250 315 43 11 chr4 9022662 9022733 -175265929 - MIR SINE MIR -5 257 181 870 168 0 0 chr4 9022733 9022864 -175265798 - FLAM_C SINE Alu -2 131 1 250 315 43 11 chr4 9022864 9022884 -175265778 - MIR SINE MIR -81 181 163 24 0 0 0 chr4 9025015 9025039 -175263623 + GC_rich Low_complexity Low_complexity 1 24 0 214 289 0 0 chr4 9025353 9025405 -175263257 + (CG)n Simple_repeat Simple_repeat 2 53 0 1332 90 57 5 chr4 9025563 9025775 -175262887 - pTR5 LTR ERV1 -2044 394 172 279 250 31 0 chr4 9025778 9025874 -175262788 - LTR30 LTR ERV1 -80 642 544 3681 148 58 44 chr4 9025874 9026771 -175261891 - pTR5 LTR ERV1 -413 2025 743 1686 139 19 38 chr4 9026797 9027113 -175261549 + AluJb SINE Alu 1 310 -2 194 278 165 0 chr4 9027313 9027410 -175261252 + L2 LINE L2 3100 3212 -60 335 331 52 13 chr4 9027441 9027595 -175261067 + L2 LINE L2 3147 3306 -7 688 178 94 42 chr4 9027690 9027866 -175260796 - MLT1E2 LTR MaLR -266 360 172 2047 193 8 3 chr4 9027866 9028229 -175260433 + MLT1A1 LTR MaLR 1 365 0 688 178 94 42 chr4 9028229 9028243 -175260419 - MLT1E2 LTR MaLR -454 172 160 507 178 0 37 chr4 9028836 9028943 -175259719 + MER58C DNA MER1_type 113 215 0 265 299 74 60 chr4 9029346 9029697 -175258965 + MLT1H LTR MaLR 107 546 -3 1915 139 10 10 chr4 9029939 9030234 -175258428 - AluJb SINE Alu -17 295 1 499 221 170 12 chr4 9030880 9031140 -175257522 + MLT1G1 LTR MaLR 5 270 -285 2142 87 0 0 chr4 9031162 9031437 -175257225 + AluSq SINE Alu 30 304 -9 1440 161 114 0 chr4 9031576 9031875 -175256787 - MLT1A1 LTR MaLR -14 351 19 2539 51 3 0 chr4 9032144 9032455 -175256207 + AluSp SINE Alu 1 312 -1 2413 45 0 0 chr4 9032501 9032791 -175255871 + AluY SINE Alu 12 301 -10 2427 32 0 3 chr4 9033369 9033654 -175255008 + AluY SINE Alu 14 297 -14 377 299 14 0 chr4 9033705 9034004 -175254658 + (TG)n Simple_repeat Simple_repeat 1 303 0 259 352 0 22 chr4 9033935 9034117 -175254545 + (TATG)n Simple_repeat Simple_repeat 1 178 0 * 526 299 0 3 chr4 9034075 9034448 -175254214 + (TG)n Simple_repeat Simple_repeat 1 371 0 2438 53 0 0 chr4 9034628 9034927 -175253735 - AluY SINE Alu -11 300 2 365 244 91 21 chr4 9035531 9035737 -175252925 + LTR16A LTR ERVL 3 254 -196 989 275 131 31 chr4 9035746 9036234 -175252428 - MLT1F LTR MaLR -5 537 1 271 267 61 38 chr4 9036238 9036369 -175252293 + LTR16A1 LTR ERVL 265 398 -59 465 215 82 38 chr4 9036450 9036608 -175252054 - MIR SINE MIR -59 203 39 260 303 148 43 chr4 9036672 9036834 -175251828 + L2 LINE L2 3133 3311 -2 1893 144 3 19 chr4 9037222 9037534 -175251128 - AluJb SINE Alu -5 307 1 545 172 15 15 chr4 9038197 9038331 -175250331 + CT-rich Low_complexity Low_complexity 2 135 0 1656 176 12 56 chr4 9038334 9038658 -175250004 - AluJb SINE Alu 0 312 3 765 197 8 0 chr4 9038684 9038816 -175249846 - FLAM_A SINE Alu 0 133 1 2119 184 38 25 chr4 9038963 9039058 -175249604 + L1MB7 LINE L1 5734 5826 -358 2084 120 10 0 chr4 9039058 9039367 -175249295 + AluSx SINE Alu 1 312 0 2119 184 38 25 chr4 9039367 9039499 -175249163 + L1MB7 LINE L1 5826 5955 -229 2451 58 0 13 chr4 9039499 9039810 -175248852 + AluY SINE Alu 1 307 -4 2119 184 38 25 chr4 9039810 9040026 -175248636 + L1MB7 LINE L1 5955 6184 0 1779 146 0 7 chr4 9040035 9040309 -175248353 + AluSx SINE Alu 1 272 -40 2464 46 0 20 chr4 9040311 9040617 -175248045 - AluY SINE Alu -11 300 1 208 123 15 46 chr4 9040631 9040696 -175247966 + A-rich Low_complexity Low_complexity 3 65 0 280 270 135 0 chr4 9040886 9040997 -175247665 - LTR16C LTR ERVL -282 209 84 235 349 0 8 chr4 9042019 9042145 -175246517 + CT-rich Low_complexity Low_complexity 1 125 0 237 310 0 14 chr4 9042579 9042650 -175246012 - MIR SINE MIR -122 140 71 180 280 93 40 chr4 9042933 9043008 -175245654 - L2 LINE L2 -1 3312 3234 192 265 235 0 chr4 9043477 9043575 -175245087 - MIR SINE MIR -68 140 20 2408 65 0 0 chr4 9043609 9043903 -175244759 - AluY SINE Alu -17 294 1 272 255 78 10 chr4 9043988 9044090 -175244572 - MIR SINE MIR -40 222 114 422 255 4 4 chr4 9045122 9045242 -175243420 - MIR SINE MIR -88 120 1 419 258 0 94 chr4 9045272 9045431 -175243231 + MIR SINE MIR 20 163 -99 283 323 71 0 chr4 9045427 9045526 -175243136 - L2 LINE L2 -3 3310 3205 * 213 150 33 33 chr4 9045679 9045739 -175242923 + (CAGGG)n Simple_repeat Simple_repeat 1 60 0 306 260 17 81 chr4 9046029 9046202 -175242460 - L1ME4a LINE L1 -1 6120 5959 341 206 8 145 chr4 9046300 9046431 -175242231 - L1ME4a LINE L1 -1 6120 6008 296 322 147 24 chr4 9046492 9046703 -175241959 + MIR SINE MIR 8 244 -18 550 208 88 0 chr4 9046782 9046907 -175241755 - MIR SINE MIR -25 237 102 1646 186 124 30 chr4 9046908 9047017 -175241645 + L1MB5 LINE L1 5699 5796 -378 1571 143 75 11 chr4 9047017 9047296 -175241366 + AluJb SINE Alu 1 297 -15 1646 186 124 30 chr4 9047296 9047621 -175241041 + L1MB5 LINE L1 5796 6174 0 198 273 26 39 chr4 9048139 9048216 -175240446 + MIR SINE MIR 109 184 -78 321 304 75 50 chr4 9048463 9048624 -175240038 + L1ME4a LINE L1 5946 6110 -11 249 335 152 11 chr4 9048714 9048905 -175239757 + L2 LINE L2 3027 3244 -28 200 333 61 26 chr4 9048912 9049026 -175239636 - MIR3 SINE MIR -76 132 15 261 230 2 45 chr4 9049397 9049473 -175239189 - MIR SINE MIR -63 145 82 216 235 12 74 chr4 9049708 9049789 -175238873 + MIR SINE MIR 172 247 -15 2016 88 0 4 chr4 9050253 9050513 -175238149 - AluSq SINE Alu -54 259 1 2124 125 0 0 chr4 9050516 9050813 -175237849 - AluSx SINE Alu -15 297 1 1028 150 0 0 chr4 9051143 9051303 -175237359 + AluSg/x SINE Alu 144 303 -6 2400 69 3 0 chr4 9051429 9051733 -175236929 + AluY SINE Alu 1 305 -6 2474 85 16 6 chr4 9051753 9052119 -175236543 + THE1C LTR MaLR 1 370 -5 2013 187 3 42 chr4 9052236 9052616 -175236046 - MLT1A1 LTR MaLR 0 365 1 2237 94 0 7 chr4 9052951 9053249 -175235413 - AluSq SINE Alu -17 296 1 1913 133 26 0 chr4 9053265 9053567 -175235095 - AluSx SINE Alu -2 310 1 1352 142 104 4 chr4 9054264 9054504 -175234158 - AluJo SINE Alu -12 300 37 378 258 99 88 chr4 9054531 9054814 -175233848 - L1MC5 LINE L1 -37 7924 7639 1775 138 7 10 chr4 9055330 9055626 -175233036 - AluJb SINE Alu -4 308 14 296 240 91 50 chr4 9055982 9056103 -175232559 - MIR SINE MIR -117 145 20 227 318 15 0 chr4 9056748 9056814 -175231848 + L2 LINE L2 3242 3308 -5 2133 153 59 50 chr4 9056973 9057204 -175231458 + MSTA LTR MaLR 1 239 -189 2249 96 0 0 chr4 9057204 9057496 -175231166 + AluSp SINE Alu 1 292 -21 2133 153 59 50 chr4 9057496 9057688 -175230974 + MSTA LTR MaLR 239 428 0 2415 93 101 25 chr4 9057996 9058394 -175230268 - MSTA LTR MaLR 0 428 1 2662 140 56 22 chr4 9060749 9060884 -175227778 + MER4C LTR ERV1 1 130 -335 1441 138 109 4 chr4 9060884 9061159 -175227503 + AluJb SINE Alu 1 304 -8 2662 140 56 22 chr4 9061159 9061473 -175227189 + MER4C LTR ERV1 130 465 0 367 301 48 14 chr4 9061481 9061627 -175227035 - MIR SINE MIR -56 206 56 2133 87 7 3 chr4 9061654 9061943 -175226719 - AluSx SINE Alu -20 292 3 596 231 162 23 chr4 9061990 9062206 -175226456 + MIR SINE MIR 13 258 -4 379 199 202 17 chr4 9062594 9062729 -175225933 + AluSq SINE Alu 107 255 -48 1338 168 75 4 chr4 9062792 9063060 -175225602 + AluJo SINE Alu 2 288 -24 7305 129 38 26 chr4 9063062 9063271 -175225391 + HSMAR2 DNA Mariner 45 250 -1052 2225 96 0 10 chr4 9063271 9063573 -175225089 - AluSc SINE Alu -10 299 1 7305 129 38 26 chr4 9063573 9064606 -175224056 + HSMAR2 DNA Mariner 250 1301 -1 231 204 0 0 chr4 9066035 9066089 -175222573 + (CA)n Simple_repeat Simple_repeat 2 55 0 268 236 97 0 chr4 9068174 9068246 -175220416 - L2 LINE L2 -1 3312 3234 610 302 14 51 chr4 9069282 9069497 -175219165 + MIR SINE MIR 1 207 -55 308 347 75 17 chr4 9069495 9069789 -175218873 - L2 LINE L2 -618 2696 2386 * 251 0 0 0 chr4 9069907 9069935 -175218727 + MLT2A2 LTR ERVL 4 31 -422 2530 65 32 9 chr4 9069937 9070275 -175218387 + HERVL LTR ERVL 5113 5458 -196 420 67 0 0 chr4 9070275 9070335 -175218327 + (TATG)n Simple_repeat Simple_repeat 1 60 0 1810 104 0 0 chr4 9070335 9070575 -175218087 - AluSx SINE Alu -33 279 40 402 276 111 50 chr4 9073952 9074133 -175214529 + MIR SINE MIR 20 211 -51 986 213 43 14 chr4 9074136 9074343 -175214319 + MIR SINE MIR 7 219 -43 1141 211 72 7 chr4 9074860 9075164 -175213498 - MER33 DNA MER1_type 0 324 1 1966 128 40 0 chr4 9075415 9075711 -175212951 - AluSx SINE Alu -4 308 1 198 273 18 0 chr4 9075732 9075787 -175212875 + MIR SINE MIR 159 214 -48 189 183 183 14 chr4 9075786 9075857 -175212805 - L3 LINE CR1 -880 697 615 * 186 294 272 11 chr4 9075829 9075921 -175212741 + L2 LINE L2 3149 3264 -8 * 3496 36 11 27 chr4 9078475 9078916 -175209746 + MLT2A1 LTR ERVL 11 444 0 199 299 0 30 chr4 9079001 9079068 -175209594 - L2 LINE L2 -76 3196 3132 414 236 149 43 chr4 9080321 9080482 -175208180 - MER5B DNA MER1_type 0 178 1 529 335 62 0 chr4 9080938 9081132 -175207530 + MIR SINE MIR 27 232 -30 276 240 250 42 chr4 9081549 9081741 -175206921 - MIR SINE MIR -29 233 2 268 290 20 10 chr4 9081871 9081971 -175206691 + L2 LINE L2 2787 2887 -427 222 262 98 0 chr4 9082105 9082166 -175206496 + L2 LINE L2 3209 3275 -38 213 258 86 43 chr4 9082246 9082339 -175206323 + MIR SINE MIR 85 181 -81 320 261 118 25 chr4 9083085 9083204 -175205458 + MIR3 SINE MIR 47 176 -32 341 333 40 0 chr4 9084462 9084588 -175204074 + L2 LINE L2 3133 3263 -9 1873 158 0 3 chr4 9084893 9085203 -175203459 - AluJb SINE Alu -3 309 1 2130 114 3 0 chr4 9085536 9085833 -175202829 - AluSx SINE Alu -14 298 1 293 293 132 9 chr4 9087252 9087358 -175201304 + L2 LINE L2 3153 3271 -1 181 213 40 67 chr4 9087455 9087530 -175201132 + L2 LINE L2 3162 3234 -79 510 318 95 37 chr4 9087758 9088085 -175200577 + L2 LINE L2 2967 3312 -1 204 269 141 0 chr4 9088496 9088574 -175200088 + MIR SINE MIR 84 172 -90 230 277 256 15 chr4 9088978 9089115 -175199547 + L2 LINE L2 2926 3095 -177 267 253 0 25 chr4 9089169 9089248 -175199414 + L1ME LINE L1 5743 5819 -302 277 336 118 8 chr4 9089489 9089608 -175199054 + L2 LINE L2 3133 3264 -8 2299 90 0 3 chr4 9090753 9091063 -175197599 + AluSx SINE Alu 1 309 -3 2271 99 3 0 chr4 9091594 9091897 -175196765 - AluSx SINE Alu -8 304 1 2436 62 3 0 chr4 9093462 9093771 -175194891 + AluY SINE Alu 1 310 -1 253 269 90 27 chr4 9094475 9094698 -175193964 - L1ME4a LINE L1 -23 6098 5862 757 158 267 0 chr4 9094723 9094888 -175193774 - MER3 DNA MER1_type 0 209 1 318 192 96 0 chr4 9095277 9095350 -175193312 - MLT1I LTR MaLR -7 402 323 225 0 0 0 chr4 9095350 9095375 -175193287 + (A)n Simple_repeat Simple_repeat 1 25 0 1785 159 0 7 chr4 9095378 9095679 -175192983 + AluJb SINE Alu 1 299 -13 279 140 70 18 chr4 9095680 9095737 -175192925 - L1MA4A LINE L1 -36 6267 6208 6560 166 8 26 chr4 9095739 9097559 -175191103 - L1MA4A LINE L1 -391 5912 4125 674 291 42 42 chr4 9097559 9097820 -175190842 - MLT1I LTR MaLR -70 339 79 181 368 11 23 chr4 9098446 9098533 -175190129 - L2 LINE L2 0 3272 3187 2045 122 20 0 chr4 9099037 9099331 -175189331 - AluSx SINE Alu -12 300 1 592 266 0 0 chr4 9099924 9100038 -175188624 + FLAM_A SINE Alu 1 117 -185 492 62 0 0 chr4 9100038 9100102 -175188560 + (TAGA)n Simple_repeat Simple_repeat 1 64 0 592 266 0 0 chr4 9100102 9100115 -175188547 + FLAM_A SINE Alu 116 128 -174 2292 82 0 13 chr4 9100356 9100662 -175188000 - AluY SINE Alu -1 310 9 325 193 44 104 chr4 9101115 9101250 -175187412 + L1M3c LINE L1 1191 1317 -4824 346 180 120 60 chr4 9102069 9102169 -175186493 + MER103 DNA DNA 15 120 -46 180 0 0 0 chr4 9102173 9102193 -175186469 + (TTCA)n Simple_repeat Simple_repeat 3 22 0 216 0 0 0 chr4 9103894 9103918 -175184744 + (TA)n Simple_repeat Simple_repeat 2 25 0 1277 197 0 86 chr4 9103931 9104246 -175184416 - AluJo SINE Alu -13 289 2 571 243 223 59 chr4 9104747 9105084 -175183578 + LTR16A LTR ERVL 59 450 0 1519 176 59 3 chr4 9105427 9105716 -175182946 - AluJo SINE Alu -7 305 1 971 155 67 21 chr4 9105805 9105999 -175182663 - MER3 DNA MER1_type 0 209 7 2125 111 3 0 chr4 9106425 9106723 -175181939 - AluSx SINE Alu -13 299 1 2056 102 0 0 chr4 9106794 9107099 -175181563 + AluSx SINE Alu 30 334 0 2153 96 0 0 chr4 9107135 9107438 -175181224 + AluSc SINE Alu 6 308 -1 1903 207 16 58 chr4 9107703 9108190 -175180472 + MLT1C LTR MaLR 1 467 0 1629 166 10 3 chr4 9108271 9108560 -175180102 + AluJo SINE Alu 1 291 -21 2200 68 44 0 chr4 9109037 9109333 -175179329 - AluYa5 SINE Alu -2 309 1 1908 129 13 20 chr4 9109333 9109635 -175179027 - AluJo SINE Alu -12 300 1 2050 137 0 0 chr4 9110581 9110881 -175177781 + AluSx SINE Alu 1 300 -12 641 267 165 43 chr4 9111049 9111178 -175177484 + L2 LINE L2 2028 2140 -1173 1121 161 79 57 chr4 9111178 9111232 -175177430 - MER33 DNA MER1_type -2261 324 273 1332 229 14 0 chr4 9111232 9111524 -175177138 + AluJo SINE Alu 1 296 -16 1121 161 79 57 chr4 9111524 9111751 -175176911 - MER33 DNA MER1_type -2312 273 32 2101 95 0 7 chr4 9111751 9112056 -175176606 + AluY SINE Alu 1 303 0 1121 161 79 57 chr4 9112056 9112088 -175176574 - MER33 DNA MER1_type -2553 32 2 641 267 165 43 chr4 9112088 9112647 -175176015 + L2 LINE L2 2140 3191 -122 945 273 86 19 chr4 9112682 9113096 -175175566 + LTR16B LTR ERVL 11 438 -26 209 265 0 0 chr4 9113096 9113145 -175175517 + L2 LINE L2 3265 3313 0 463 337 28 29 chr4 9113150 9113402 -175175260 + MIR SINE MIR 3 256 -6 200 98 0 49 chr4 9113926 9113967 -175174695 + (TTAA)n Simple_repeat Simple_repeat 1 39 0 514 207 140 61 chr4 9114062 9114137 -175174525 - MER45A DNA AcHobo -1404 177 109 2307 76 13 3 chr4 9114137 9114441 -175174221 + AluY SINE Alu 1 307 -4 514 207 140 61 chr4 9114441 9114529 -175174133 - MER45A DNA AcHobo -1472 109 1 342 240 116 29 chr4 9114759 9114906 -175173756 + L1ME LINE L1 5660 5819 -302 2338 112 45 25 chr4 9114946 9115303 -175173359 - THE1B LTR MaLR 0 364 1 1994 148 0 10 chr4 9115496 9115807 -175172855 + AluJb SINE Alu 3 310 -2 2050 112 10 3 chr4 9115904 9116207 -175172455 + AluSx SINE Alu 1 305 -7 1725 148 41 7 chr4 9116439 9116730 -175171932 + AluJb SINE Alu 2 302 -10 35 0 0 0 chr4 9116734 9116769 -175171893 + AT_rich Low_complexity Low_complexity 1 35 0 1983 125 7 7 chr4 9117081 9117376 -175171286 - AluJb SINE Alu -17 295 1 2067 116 3 3 chr4 9117551 9117852 -175170810 + AluSg SINE Alu 1 301 -9 2311 80 0 3 chr4 9117852 9118164 -175170498 + AluY SINE Alu 1 311 0 315 274 60 0 chr4 9118289 9118373 -175170289 - MIR SINE MIR -2 260 172 1414 180 74 0 chr4 9118805 9119089 -175169573 + AluJb SINE Alu 1 305 -7 2318 73 7 0 chr4 9119921 9120222 -175168440 - AluSc SINE Alu -6 303 1 1773 136 7 27 chr4 9120521 9120816 -175167846 + AluJo SINE Alu 7 295 -17 27 29 0 0 chr4 9120845 9120879 -175167783 + AT_rich Low_complexity Low_complexity 1 34 0 360 346 104 37 chr4 9120937 9121521 -175167141 - L2 LINE L2 -17 3255 2626 288 350 36 0 chr4 9121601 9121738 -175166924 - MIR SINE MIR -57 205 64 2078 77 20 13 chr4 9121886 9122185 -175166477 + AluY SINE Alu 1 301 -10 1003 192 0 16 chr4 9123446 9123628 -175165034 - MLT1B LTR MaLR 0 390 212 2016 110 7 0 chr4 9123637 9123928 -175164734 - AluSx SINE Alu -19 293 1 592 136 31 117 chr4 9123929 9124091 -175164571 - L1MB5 LINE L1 -345 5829 5682 360 295 67 35 chr4 9124091 9124345 -175164317 - L1M4 LINE L1 -981 5165 4904 1924 86 61 4 chr4 9124367 9124647 -175164015 - AluSc SINE Alu -6 303 8 386 299 82 25 chr4 9124671 9124915 -175163747 - L1M4 LINE L1 -1248 4898 4641 1243 178 5 0 chr4 9124943 9125156 -175163506 - AluJb SINE Alu -98 214 1 1834 162 0 10 chr4 9125166 9125474 -175163188 - AluJo SINE Alu -7 305 1 21 0 0 0 chr4 9125660 9125681 -175162981 + AT_rich Low_complexity Low_complexity 1 21 0 1515 199 156 13 chr4 9125709 9126107 -175162555 + MLT1C LTR MaLR 6 460 -7 330 283 87 60 chr4 9126125 9126309 -175162353 - L1M4 LINE L1 -1744 4402 4214 2367 130 77 70 chr4 9126320 9126547 -175162115 - MER66B LTR ERV1 0 486 262 2072 117 3 7 chr4 9126547 9126845 -175161817 + AluSx SINE Alu 2 298 -14 1997 123 3 7 chr4 9126847 9127149 -175161513 + AluSg SINE Alu 3 303 -7 2367 130 77 70 chr4 9127149 9127401 -175161261 - MER66B LTR ERV1 -224 262 1 527 211 83 0 chr4 9127469 9127578 -175161084 + MLT1F1 LTR MaLR 13 130 -437 1540 153 11 28 chr4 9127905 9128187 -175160475 + AluJb SINE Alu 36 312 0 2442 65 0 0 chr4 9128200 9128506 -175160156 + AluY SINE Alu 1 306 -5 284 202 35 123 chr4 9128882 9128996 -175159666 + LTR16B LTR ERVL 19 122 -342 207 352 101 48 chr4 9129179 9129617 -175159045 + L2 LINE L2 361 821 -2493 230 258 212 61 chr4 9129629 9129761 -175158901 + MIR SINE MIR 101 252 -10 261 333 157 12 chr4 9129864 9130113 -175158549 + L2 LINE L2 844 1128 -2186 186 357 88 39 chr4 9130124 9130407 -175158255 - L2 LINE L2 -2861 453 157 2425 67 100 0 chr4 9130428 9130769 -175157893 - THE1C LTR MaLR 0 375 1 1226 255 101 13 chr4 9131129 9131505 -175157157 - MLT1I LTR MaLR 0 409 1 1744 130 0 4 chr4 9131558 9131848 -175156814 + AluSx SINE Alu 22 310 0 382 257 146 35 chr4 9132079 9132250 -175156412 + L1MC4a LINE L1 5754 5943 -1865 624 212 0 8 chr4 9132256 9132388 -175156274 + FLAM_C SINE Alu 1 131 -2 1122 159 50 50 chr4 9132416 9132674 -175155988 + AluJb SINE Alu 42 299 -13 547 151 162 12 chr4 9132822 9132951 -175155711 + L1MD3 LINE L1 7694 7870 -125 1226 262 78 27 chr4 9133235 9133647 -175155015 - LTR16A LTR ERVL -10 440 8 1842 132 20 0 chr4 9136356 9136659 -175152003 + AluSx SINE Alu 3 311 -1 2441 71 0 0 chr4 9136774 9137085 -175151577 - AluY SINE Alu 0 311 1 858 186 6 6 chr4 9137111 9137272 -175151390 - FRAM SINE Alu -5 161 1 1852 107 126 69 chr4 9137816 9138332 -175150330 + MER4A LTR ERV1 1 624 -40 13386 27 1 1 chr4 9138332 9140659 -175148003 - L1PA3 LINE L1 0 6155 3828 1852 107 126 69 chr4 9140659 9140703 -175147959 + MER4A LTR ERV1 624 664 0 4897 161 36 7 chr4 9140763 9141623 -175147039 + L1MC1 LINE L1 5429 6313 -20 558 226 77 70 chr4 9141807 9141847 -175146815 - L1M4 LINE L1 -2952 3194 3156 2001 132 7 0 chr4 9141847 9142143 -175146519 - AluSx SINE Alu -14 298 1 558 226 77 70 chr4 9142143 9142412 -175146250 - L1M4 LINE L1 -2990 3156 2879 2092 101 26 13 chr4 9142412 9142720 -175145942 + AluSq SINE Alu 1 312 -1 558 226 77 70 chr4 9142720 9142812 -175145850 - L1M4 LINE L1 -3267 2879 2789 2297 155 89 33 chr4 9143562 9143794 -175144868 + MER66B LTR ERV1 4 222 -264 2030 122 0 3 chr4 9143794 9144088 -175144574 + AluSx SINE Alu 1 293 -19 2297 155 89 33 chr4 9144088 9144306 -175144356 + MER66B LTR ERV1 222 479 -7 988 228 5 9 chr4 9144395 9144610 -175144052 + MLT1A2 LTR MaLR 1 214 -160 3637 121 6 0 chr4 9144610 9145115 -175143547 - LTR31 LTR ERV1 0 619 112 800 235 0 0 chr4 9145115 9145281 -175143381 + FRAM SINE Alu 1 166 -10 674 115 74 25 chr4 9145281 9145403 -175143259 - LTR31 LTR ERV1 -491 128 1 694 269 0 0 chr4 9145446 9145602 -175143060 + MLT1A2 LTR MaLR 215 370 -4 2383 73 0 13 chr4 9146133 9146447 -175142215 + AluY SINE Alu 1 310 -1 726 233 43 67 chr4 9146615 9146654 -175142008 - MLT1H1 LTR MaLR 0 555 517 1709 164 3 7 chr4 9146654 9146947 -175141715 - AluJb SINE Alu -20 292 1 726 233 43 67 chr4 9146947 9147160 -175141502 - MLT1H1 LTR MaLR -38 517 309 266 328 76 0 chr4 9147219 9147338 -175141324 - MLT1J LTR MaLR -383 128 1 23 0 0 0 chr4 9147480 9147503 -175141159 + AT_rich Low_complexity Low_complexity 1 23 0 532 131 9 9 chr4 9147771 9147878 -175140784 + (TTCCC)n Simple_repeat Simple_repeat 4 110 0 1836 152 16 10 chr4 9147880 9148190 -175140472 - AluJb SINE Alu 0 312 1 313 195 65 0 chr4 9148259 9148336 -175140326 - L1ME3A LINE L1 -220 5950 5869 293 19 74 0 chr4 9148338 9148392 -175140270 + (TCTA)n Simple_repeat Simple_repeat 3 60 0 916 276 59 55 chr4 9148409 9148468 -175140194 - L1ME3A LINE L1 -310 5860 5803 878 250 5 0 chr4 9148468 9148656 -175140006 - MER5A DNA MER1_type 0 189 1 916 276 59 55 chr4 9148656 9148793 -175139869 - L1ME3A LINE L1 -367 5803 5668 1833 117 0 87 chr4 9148793 9148969 -175139693 - AluSx SINE Alu -8 304 114 228 86 0 0 chr4 9148969 9149004 -175139658 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2391 46 0 0 chr4 9149004 9149288 -175139374 - AluY SINE Alu -27 284 1 1833 117 0 87 chr4 9149288 9149443 -175139219 - AluSx SINE Alu -196 116 1 916 276 59 55 chr4 9149443 9149734 -175138928 - L1ME3A LINE L1 -502 5668 5370 2330 64 3 3 chr4 9149872 9150167 -175138495 - AluSp SINE Alu -18 295 1 669 139 9 0 chr4 9150222 9150330 -175138332 + MLT1A1 LTR MaLR 1 109 -256 244 245 94 38 chr4 9150335 9150441 -175138221 - LTR38 LTR ERV1 0 556 445 1742 138 3 7 chr4 9150645 9150928 -175137734 - AluJb SINE Alu 0 312 31 996 184 16 5 chr4 9150997 9151187 -175137475 - AluJb SINE Alu -78 234 43 1160 172 40 9 chr4 9151389 9151587 -175137075 + MLT1A1 LTR MaLR 130 337 -28 1976 50 46 8 chr4 9151587 9151847 -175136815 - AluY SINE Alu -15 296 27 1160 172 40 9 chr4 9151847 9151875 -175136787 + MLT1A1 LTR MaLR 337 363 -2 207 0 0 0 chr4 9151883 9151906 -175136756 + (TG)n Simple_repeat Simple_repeat 2 24 0 2219 85 3 0 chr4 9151906 9152200 -175136462 - AluSp SINE Alu -18 295 1 906 134 8 0 chr4 9152200 9152334 -175136328 - AluSq/x SINE Alu -178 135 1 267 104 0 0 chr4 9152435 9152483 -175136179 + (A)n Simple_repeat Simple_repeat 1 48 0 1786 177 0 3 chr4 9152492 9152797 -175135865 + AluJo SINE Alu 8 311 -1 1701 179 10 0 chr4 9153040 9153337 -175135325 - AluJo SINE Alu -12 300 1 1789 109 58 20 chr4 9153344 9153637 -175135025 - AluSx SINE Alu -8 304 1 1988 128 10 0 chr4 9153977 9154273 -175134389 + AluSx SINE Alu 1 299 -13 2036 200 89 11 chr4 9154281 9154802 -175133860 - L1MB7 LINE L1 -19 6165 5601 183 42 0 0 chr4 9156015 9156039 -175132623 + (TCCC)n Simple_repeat Simple_repeat 1 24 0 200 365 31 0 chr4 9156039 9156135 -175132527 - L2 LINE L2 -1 3271 3173 243 346 98 0 chr4 9156896 9157049 -175131613 - MIR SINE MIR -36 226 59 199 292 46 46 chr4 9157660 9157725 -175130937 + MIR3 SINE MIR 111 175 -33 297 310 92 7 chr4 9158190 9158332 -175130330 - MIR SINE MIR -80 182 29 1608 175 3 30 chr4 9158442 9158563 -175130099 + AluSx SINE Alu 16 139 -173 2233 96 0 7 chr4 9158563 9158865 -175129797 + AluSp SINE Alu 1 300 -13 1608 175 3 30 chr4 9158865 9159040 -175129622 + AluSx SINE Alu 139 304 -8 2877 86 0 0 chr4 9159447 9159808 -175128854 + THE1B LTR MaLR 2 362 -2 373 252 89 0 chr4 9159812 9159935 -175128727 - MIR SINE MIR -91 171 38 388 185 33 0 chr4 9160039 9160131 -175128531 + MLT1I LTR MaLR 75 169 -240 337 284 35 0 chr4 9160216 9160332 -175128330 + MLT1I LTR MaLR 290 409 0 244 328 117 14 chr4 9160402 9160543 -175128119 - MIR SINE MIR -61 147 3 196 333 0 17 chr4 9160543 9160595 -175128067 + MER5B DNA MER1_type 76 126 -52 2140 122 0 0 chr4 9160609 9160905 -175127757 + AluSx SINE Alu 1 296 -16 1911 133 3 14 chr4 9160905 9161198 -175127464 - AluJo SINE Alu -22 290 1 884 168 0 31 chr4 9161434 9161595 -175127067 - AluJo SINE Alu -152 160 5 187 374 36 0 chr4 9161627 9161710 -175126952 - L2 LINE L2 -50 3222 3137 214 341 35 0 chr4 9161835 9161920 -175126742 + L2 LINE L2 3175 3262 -51 281 326 109 0 chr4 9162122 9162269 -175126393 + MIR3 SINE MIR 25 187 -21 254 302 71 8 chr4 9162691 9162817 -175125845 - MIR3 SINE MIR -10 198 65 725 132 36 18 chr4 9162832 9163057 -175125605 + CT-rich Low_complexity Low_complexity 1 229 0 318 233 0 0 chr4 9163059 9163119 -175125543 + C-rich Low_complexity Low_complexity 3 62 0 1569 171 59 14 chr4 9163119 9163406 -175125256 - AluJo SINE Alu -12 300 1 420 271 104 70 chr4 9163546 9163929 -175124733 + MLT1K LTR MaLR 185 580 -8 287 279 93 0 chr4 9164456 9164542 -175124120 + L2 LINE L2 3179 3272 0 1092 129 0 45 chr4 9164898 9165076 -175123586 - AluSg/x SINE Alu -9 301 132 474 229 76 0 chr4 9165211 9165329 -175123333 + MIR3 SINE MIR 58 184 -24 212 284 25 25 chr4 9165930 9166011 -175122651 + MIR SINE MIR 1 81 -181 344 260 199 22 chr4 9166034 9166215 -175122447 - MIR SINE MIR -37 225 13 2306 94 0 0 chr4 9166256 9166555 -175122107 + AluSx SINE Alu 1 299 -13 387 335 62 6 chr4 9168004 9168180 -175120482 - MIR SINE MIR -55 207 22 4405 161 48 18 chr4 9168513 9169208 -175119454 + L1MB7 LINE L1 5183 5916 -268 1840 149 20 10 chr4 9169208 9169487 -175119175 + AluJb SINE Alu 1 285 -27 189 0 0 0 chr4 9169487 9169508 -175119154 + (CAAT)n Simple_repeat Simple_repeat 4 24 0 1840 149 20 10 chr4 9169508 9169523 -175119139 + AluJb SINE Alu 285 298 -14 4405 161 48 18 chr4 9169523 9169792 -175118870 + L1MB7 LINE L1 5916 6175 -9 242 221 15 29 chr4 9170523 9170591 -175118071 + CT-rich Low_complexity Low_complexity 3 69 0 641 235 6 0 chr4 9170779 9170958 -175117704 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 233 256 0 0 chr4 9170962 9171005 -175117657 + (TGGG)n Simple_repeat Simple_repeat 2 44 0 190 286 0 0 chr4 9171007 9171056 -175117606 + MIR3 SINE MIR 139 187 -21 220 266 49 152 chr4 9171770 9171954 -175116708 - L3 LINE CR1 -236 1341 1177 195 311 73 0 chr4 9172488 9172639 -175116023 + L2 LINE L2 2812 2973 -299 590 279 29 17 chr4 9172962 9173134 -175115528 + L2 LINE L2 3136 3309 -4 205 313 31 0 chr4 9173353 9173417 -175115245 + L2 LINE L2 3207 3272 0 1912 161 0 19 chr4 9173737 9174048 -175114614 + AluJb SINE Alu 1 305 -7 1618 204 64 3 chr4 9174138 9174482 -175114180 + MLT1A1 LTR MaLR 1 365 0 439 214 0 31 chr4 9174901 9174999 -175113663 + MER21B LTR ERV1 1 95 -768 732 272 60 44 chr4 9175039 9175192 -175113470 + MER21B LTR ERV1 98 247 -616 2040 117 17 3 chr4 9175192 9175491 -175113171 - AluSq SINE Alu -10 303 1 732 272 60 44 chr4 9175491 9175812 -175112850 + MER21B LTR ERV1 247 785 -78 277 258 45 0 chr4 9175812 9175878 -175112784 + MIR SINE MIR 104 172 -90 350 171 29 0 chr4 9176383 9176453 -175112209 - MIR SINE MIR -118 144 73 189 313 40 30 chr4 9176612 9176711 -175111951 + L2 LINE L2 2873 2972 -341 2487 43 3 7 chr4 9177029 9177332 -175111330 - AluY SINE Alu -9 302 1 1597 145 3 35 chr4 9177338 9177621 -175111041 + AluJo SINE Alu 32 305 -7 248 242 264 22 chr4 9177693 9177784 -175110878 - MER81 DNA DNA -1 113 1 536 291 101 5 chr4 9177937 9178136 -175110526 + MIR SINE MIR 45 262 0 256 299 11 20 chr4 9178159 9178282 -175110380 - MIR SINE MIR -56 152 29 255 226 0 0 chr4 9178646 9178699 -175109963 - MIR SINE MIR -119 143 91 260 363 112 28 chr4 9178950 9179129 -175109533 - MIR SINE MIR -25 237 44 1557 208 103 3 chr4 9180966 9181326 -175107336 + MSTD LTR MaLR 1 396 0 237 300 187 27 chr4 9181326 9181476 -175107186 - MIR SINE MIR -14 248 75 228 282 190 14 chr4 9181590 9181732 -175106930 - L2 LINE L2 -188 3084 2918 1707 85 51 0 chr4 9182317 9182552 -175106110 - AluSq SINE Alu -66 247 1 35 41 0 0 chr4 9182597 9182646 -175106016 + AT_rich Low_complexity Low_complexity 1 49 0 717 289 32 56 chr4 9182707 9182956 -175105706 + MIR SINE MIR 16 258 -4 252 242 242 25 chr4 9182966 9183123 -175105539 - MIR SINE MIR -28 234 44 192 282 117 29 chr4 9183567 9183670 -175104992 + MIR SINE MIR 20 131 -131 996 180 0 14 chr4 9183762 9183973 -175104689 + MER96B DNA MER1_type? 4 211 -206 1620 147 56 0 chr4 9184100 9184366 -175104296 - AluJo SINE Alu -21 291 11 247 233 23 23 chr4 9184415 9184501 -175104161 + MIR SINE MIR 170 255 -7 187 262 16 16 chr4 9184572 9184633 -175104029 - MIR SINE MIR -171 91 31 561 292 70 11 chr4 9184680 9184865 -175103797 + MIR SINE MIR 46 241 -21 807 243 111 10 chr4 9185172 9185460 -175103202 + LTR53 LTR ERVL 196 512 -7 1954 152 10 0 chr4 9185549 9185846 -175102816 - AluSx SINE Alu -12 300 1 225 0 0 0 chr4 9186304 9186329 -175102333 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 1894 119 0 48 chr4 9186329 9186623 -175102039 - AluSx SINE Alu -32 280 1 1651 162 45 10 chr4 9186625 9186915 -175101747 - AluJo SINE Alu -12 300 1 561 274 12 12 chr4 9186944 9187126 -175101536 + MIR SINE MIR 2 184 -56 2077 127 3 7 chr4 9187172 9187479 -175101183 + AluSq SINE Alu 1 306 -7 255 314 25 17 chr4 9187850 9187968 -175100694 - L3 LINE CR1 -37 1540 1422 1922 110 45 0 chr4 9187980 9188270 -175100392 - AluSx SINE Alu -5 307 5 1423 177 3 79 chr4 9188272 9188600 -175100062 + MLT1B LTR MaLR 80 382 -8 2117 118 0 16 chr4 9188653 9188968 -175099694 + AluSx SINE Alu 1 310 -2 205 191 0 0 chr4 9188981 9189023 -175099639 + A-rich Low_complexity Low_complexity 1 42 0 1734 199 36 3 chr4 9189880 9190216 -175098446 - L1MB3 LINE L1 -3 6180 5834 1965 123 0 39 chr4 9190363 9190672 -175097990 + AluJo SINE Alu 12 308 -4 1085 238 199 24 chr4 9190672 9191139 -175097523 + MLT1F1 LTR MaLR 19 567 0 213 360 48 20 chr4 9191254 9191401 -175097261 - MIR SINE MIR -32 230 80 240 316 0 13 chr4 9191857 9191933 -175096729 + MLT1L LTR MaLR 120 194 -421 802 218 12 1 chr4 9191960 9192285 -175096377 + MER93b LTR ERV1 1 365 -8 277 250 52 86 chr4 9192314 9192430 -175096232 + MLT1L LTR MaLR 236 392 -164 2303 207 105 18 chr4 9192501 9193168 -175095494 + MER50 LTR ERV1 10 734 0 543 246 5 64 chr4 9193229 9193416 -175095246 + MLT1J LTR MaLR 3 178 -333 629 236 65 91 chr4 9193416 9193814 -175094848 + MLT1J2 LTR MaLR 63 450 0 319 119 34 0 chr4 9193966 9194025 -175094637 + FLAM_A SINE Alu 64 124 -9 2013 124 0 3 chr4 9194073 9194394 -175094268 + AluSx SINE Alu 1 320 0 421 307 67 32 chr4 9195258 9195447 -175093215 + MIR SINE MIR 20 219 -43 214 315 99 43 chr4 9195497 9195659 -175093003 + MIR SINE MIR 48 218 -44 310 304 105 49 chr4 9196685 9196892 -175091770 + MIR3 SINE MIR 12 221 -41 429 226 0 32 chr4 9196944 9197130 -175091532 + (ATGGTG)n Simple_repeat Simple_repeat 1 180 0 * 699 164 0 48 chr4 9197128 9197317 -175091345 + (TGG)n Simple_repeat Simple_repeat 1 180 0 1163 87 0 22 chr4 9197333 9197517 -175091145 + (TGG)n Simple_repeat Simple_repeat 1 180 0 1251 116 0 0 chr4 9197529 9197761 -175090901 + (TGG)n Simple_repeat Simple_repeat 1 232 0 802 281 54 4 chr4 9197804 9198046 -175090616 - MIR SINE MIR -6 256 3 219 337 31 31 chr4 9198441 9198539 -175090123 + L2 LINE L2 3203 3300 -13 260 270 36 22 chr4 9198559 9198696 -175089966 - L1MC4 LINE L1 -1 8041 7903 539 225 9 9 chr4 9198797 9198908 -175089754 - L2 LINE L2 -2 3311 3201 330 261 61 17 chr4 9199050 9199165 -175089497 + MIR SINE MIR 33 152 -110 324 203 158 40 chr4 9199622 9199799 -175088863 - MER102a DNA MER1_type -25 305 108 341 243 180 9 chr4 9200712 9200823 -175087839 + MIR3 SINE MIR 14 143 -65 262 243 14 48 chr4 9200841 9200924 -175087738 - MIR SINE MIR -59 149 69 322 298 0 66 chr4 9201143 9201264 -175087398 - MIR3 SINE MIR -54 154 42 28 29 0 0 chr4 9201551 9201586 -175087076 + GC_rich Low_complexity Low_complexity 1 35 0 1755 155 3 7 chr4 9202056 9202352 -175086310 - AluJb SINE Alu -17 295 1 290 279 70 0 chr4 9202354 9202440 -175086222 - MIR SINE MIR -112 150 59 204 200 20 0 chr4 9202453 9202503 -175086159 + MIR SINE MIR 74 124 -138 813 258 163 18 chr4 9202919 9203256 -175085406 + MLT1J2 LTR MaLR 20 405 -45 786 205 83 122 chr4 9203281 9203350 -175085312 + MLT1G LTR MaLR 3 73 -522 5725 104 47 16 chr4 9203350 9204225 -175084437 - MER4D LTR ERV1 -1 902 1 786 205 83 122 chr4 9204225 9204298 -175084364 + MLT1G LTR MaLR 73 147 -448 1433 206 0 44 chr4 9204298 9204619 -175084043 - AluJo SINE Alu -1 311 5 667 175 108 0 chr4 9204626 9204746 -175083916 - FLAM_C SINE Alu 0 133 1 786 205 83 122 chr4 9204746 9204946 -175083716 + MLT1G LTR MaLR 153 309 -286 1105 367 43 11 chr4 9205088 9205885 -175082777 - HERV16 LTR ERVL -395 5369 4509 951 224 76 27 chr4 9205890 9206193 -175082469 + MLT1F LTR MaLR 199 497 -45 935 275 42 0 chr4 9206195 9206435 -175082227 - HERV16 LTR ERVL -3060 1936 1687 903 110 24 12 chr4 9206508 9206672 -175081990 + CT-rich Low_complexity Low_complexity 1 166 0 588 136 32 26 chr4 9206711 9206865 -175081797 + CT-rich Low_complexity Low_complexity 1 155 0 1958 124 16 22 chr4 9206865 9207356 -175081306 - AluSq SINE Alu 0 313 1 507 319 165 19 chr4 9207361 9207725 -175080937 - HERV16 LTR ERVL -3456 1540 1124 1206 225 62 37 chr4 9207799 9208245 -175080417 - MLT1B LTR MaLR 0 390 1 800 320 57 30 chr4 9208286 9208724 -175079938 - HERV16 LTR ERVL -4077 919 470 2198 98 0 3 chr4 9208754 9209049 -175079613 - AluSq SINE Alu -7 306 13 402 75 0 0 chr4 9209061 9209114 -175079548 - MSTB LTR MaLR -373 53 1 1582 254 67 22 chr4 9209157 9209750 -175078912 - L2 LINE L2 -231 3082 2458 235 267 59 20 chr4 9210927 9211028 -175077634 + L2 LINE L2 2911 3015 -257 231 235 59 0 chr4 9211422 9211490 -175077172 + MIR SINE MIR 117 188 -74 220 241 149 0 chr4 9212458 9212545 -175076117 + MIR SINE MIR 48 147 -115 306 188 0 79 chr4 9212646 9212811 -175075851 + C-rich Low_complexity Low_complexity 6 157 0 23 33 0 0 chr4 9212830 9212860 -175075802 + GC_rich Low_complexity Low_complexity 1 30 0 28 29 0 0 chr4 9212892 9212927 -175075735 + GC_rich Low_complexity Low_complexity 1 35 0 205 243 19 39 chr4 9212995 9213098 -175075564 + C-rich Low_complexity Low_complexity 4 104 0 225 221 13 39 chr4 9213174 9213251 -175075411 + (CCCCG)n Simple_repeat Simple_repeat 4 78 0 460 276 35 52 chr4 9213880 9214054 -175074608 + MIR SINE MIR 22 192 -70 496 129 24 0 chr4 9214268 9214353 -175074309 - MIR SINE MIR -112 150 64 255 250 0 0 chr4 9214980 9215096 -175073566 + (TG)n Simple_repeat Simple_repeat 2 117 0 1930 243 118 21 chr4 9215256 9216040 -175072622 - MER45C DNA AcHobo 0 953 6 505 297 88 0 chr4 9216084 9216266 -175072396 - MIR SINE MIR 0 262 65 1766 179 82 9 chr4 9216805 9217145 -175071517 - MLT1A1 LTR MaLR 0 365 1 329 0 0 24 chr4 9217283 9217325 -175071337 + (TG)n Simple_repeat Simple_repeat 2 42 0 330 267 145 35 chr4 9217335 9217544 -175071118 - MIR SINE MIR -6 256 38 302 271 138 9 chr4 9219038 9219248 -175069414 + L2 LINE L2 2832 3068 -245 192 77 0 0 chr4 9219308 9219334 -175069328 + (TTTC)n Simple_repeat Simple_repeat 3 28 0 425 307 84 18 chr4 9219655 9219880 -175068782 + LTR33 LTR ERVL 10 249 -272 1171 323 62 13 chr4 9219921 9220141 -175068521 + HERVL LTR ERVL 3747 3955 -1699 1918 202 146 17 chr4 9220141 9220601 -175068061 - MLT2B1 LTR ERVL 0 520 2 1171 323 62 13 chr4 9220601 9220916 -175067746 + HERVL LTR ERVL 3955 4308 -1346 341 232 24 0 chr4 9221311 9221393 -175067269 + MER94 DNA DNA 1 84 -50 1041 176 129 24 chr4 9221434 9221708 -175066954 + MLT1A1 LTR MaLR 6 341 -55 2239 119 0 0 chr4 9221708 9222137 -175066525 - AluSx SINE Alu 0 429 1 400 187 27 0 chr4 9222138 9222213 -175066449 + MLT1A1 LTR MaLR 288 364 -1 * 2053 205 34 18 chr4 9222213 9222654 -175066008 - MLT1C LTR MaLR -19 448 1 411 340 80 4 chr4 9222659 9222897 -175065765 + HERVL LTR ERVL 4828 5083 -681 411 283 121 53 chr4 9223334 9223656 -175065006 + LTR33 LTR ERVL 1 344 -177 183 348 174 0 chr4 9223814 9223929 -175064733 + MIR SINE MIR 47 181 -81 2574 120 10 135 chr4 9223929 9224506 -175064156 + MLT1D LTR MaLR 1 505 0 1761 271 34 6 chr4 9224746 9225252 -175063410 - MLT1H1 LTR MaLR -3 552 33 212 260 110 0 chr4 9225364 9225437 -175063225 - L2 LINE L2 -1 3312 3232 474 344 54 0 chr4 9225457 9225681 -175062981 - MIR SINE MIR -19 243 8 1507 176 7 46 chr4 9225769 9226076 -175062586 + AluJo SINE Alu 1 295 -17 232 293 51 32 chr4 9226198 9226355 -175062307 - L2 LINE L2 -336 2977 2818 298 327 9 9 chr4 9226515 9226622 -175062040 - MIR SINE MIR -56 152 46 199 277 158 71 chr4 9226895 9227079 -175061583 - MIR SINE MIR 0 262 63 356 212 189 15 chr4 9227206 9227338 -175061324 + L2 LINE L2 2918 3072 -241 438 259 40 26 chr4 9227352 9227603 -175061059 - L2 LINE L2 -328 2944 2580 226 341 47 0 chr4 9227638 9227723 -175060939 - L2 LINE L2 -4 3268 3180 426 321 114 25 chr4 9227825 9228199 -175060463 + LTR16A LTR ERVL 13 436 -28 260 307 40 10 chr4 9228210 9228311 -175060351 - L1MC/D LINE L1 -766 5578 5475 400 174 0 83 chr4 9228427 9228465 -175060197 - L1MC/D LINE L1 -771 5471 5431 2114 109 0 0 chr4 9228465 9228779 -175059883 - AluSx SINE Alu 0 314 1 400 174 0 83 chr4 9228779 9228848 -175059814 - L1MC/D LINE L1 -811 5431 5372 547 270 20 0 chr4 9228851 9229003 -175059659 - L1MC/D LINE L1 -1102 5044 4890 389 308 89 16 chr4 9229354 9229601 -175059061 + L1MC4 LINE L1 7707 7971 -71 221 309 0 0 chr4 9229764 9229819 -175058843 + CT-rich Low_complexity Low_complexity 3 57 0 519 279 7 15 chr4 9230168 9230304 -175058358 + MIR SINE MIR 66 200 -62 267 367 7 43 chr4 9230880 9231019 -175057643 - MIR SINE MIR -74 188 55 276 275 46 37 chr4 9231050 9231159 -175057503 - MIR SINE MIR -66 142 33 21 0 0 0 chr4 9231743 9231764 -175056898 + AT_rich Low_complexity Low_complexity 1 21 0 1864 143 20 0 chr4 9232078 9232372 -175056290 + AluJo SINE Alu 1 300 -12 242 276 41 20 chr4 9232479 9232577 -175056085 - MLT1J LTR MaLR -90 421 322 1078 93 0 0 chr4 9233135 9233274 -175055388 - AluSg SINE Alu -171 139 1 524 313 60 19 chr4 9233341 9233609 -175055053 - LTR16A LTR ERVL -7 443 165 271 248 88 29 chr4 9233888 9233984 -175054678 - L1MC/D LINE L1 -2689 3457 3349 2023 104 6 31 chr4 9233984 9234302 -175054360 - AluSx SINE Alu -2 310 1 271 248 88 29 chr4 9234302 9234342 -175054320 - L1MC/D LINE L1 -2797 3349 3313 222 226 19 0 chr4 9234518 9234571 -175054091 + MIR SINE MIR 79 132 -76 188 300 57 43 chr4 9234708 9234778 -175053884 + L2 LINE L2 3242 3312 -1 1890 127 58 0 chr4 9234885 9235176 -175053486 + AluSx SINE Alu 1 308 -4 234 0 0 0 chr4 9235311 9235337 -175053325 + (TTAA)n Simple_repeat Simple_repeat 4 29 0 868 303 50 54 chr4 9235415 9235838 -175052824 + MLT1J LTR MaLR 13 433 -78 3941 157 18 17 chr4 9236005 9236662 -175052000 + L1MB7 LINE L1 5520 6177 -7 225 328 64 8 chr4 9236813 9236938 -175051724 + MIR SINE MIR 51 182 -80 2145 186 23 49 chr4 9237260 9237733 -175050929 - MLT1C LTR MaLR 0 467 7 221 232 195 0 chr4 9237799 9237881 -175050781 - L2 LINE L2 -17 3296 3199 242 311 17 3 chr4 9238438 9238563 -175050099 + MIR SINE MIR 48 212 -50 1907 145 86 17 chr4 9238574 9238865 -175049797 - L1MB3 LINE L1 -2 6181 5859 2376 82 0 0 chr4 9238865 9239170 -175049492 + AluY SINE Alu 1 305 -6 1907 145 86 17 chr4 9239170 9239237 -175049425 - L1MB3 LINE L1 -324 5859 5798 228 275 103 101 chr4 9239465 9239495 -175049167 - L1MC/D LINE L1 -1916 5892 5864 2250 97 0 0 chr4 9239495 9239794 -175048868 - AluSx SINE Alu -13 299 1 228 275 103 101 chr4 9239794 9240395 -175048267 - L1MC/D LINE L1 -1944 5864 5260 251 119 0 0 chr4 9240794 9240836 -175047826 - L2 LINE L2 -219 3053 3012 217 261 31 0 chr4 9241089 9241154 -175047508 - MIR SINE MIR -83 179 113 201 260 30 50 chr4 9241568 9241668 -175046994 + C-rich Low_complexity Low_complexity 2 99 0 198 302 47 0 chr4 9241764 9241850 -175046812 - L2 LINE L2 -1 3271 3182 385 239 16 6 chr4 9242024 9242345 -175046317 + (TG)n Simple_repeat Simple_repeat 1 324 0 233 254 0 0 chr4 9242373 9242440 -175046222 + (TG)n Simple_repeat Simple_repeat 2 68 0 447 216 8 36 chr4 9242461 9242836 -175045826 + (TG)n Simple_repeat Simple_repeat 1 364 0 210 191 149 0 chr4 9243982 9244029 -175044633 - L2 LINE L2 -2 3311 3258 279 311 67 8 chr4 9244218 9244337 -175044325 - MIR SINE MIR -74 188 63 243 0 0 0 chr4 9244899 9244926 -175043736 + (CA)n Simple_repeat Simple_repeat 2 28 0 766 305 59 25 chr4 9245184 9245538 -175043124 + L2 LINE L2 2920 3285 -28 415 272 19 0 chr4 9246148 9246251 -175042411 + MIR3 SINE MIR 82 186 -22 198 0 0 0 chr4 9246255 9246277 -175042385 + (TG)n Simple_repeat Simple_repeat 1 22 0 337 324 75 23 chr4 9246376 9246549 -175042113 - MIR SINE MIR -24 238 57 586 221 139 19 chr4 9247126 9247284 -175041378 + MIR SINE MIR 73 249 -13 279 285 31 92 chr4 9247717 9247847 -175040815 + MIR SINE MIR 29 143 -65 604 289 38 30 chr4 9248317 9248348 -175040314 + L2 LINE L2 3077 3106 -207 1256 179 24 94 chr4 9248348 9248678 -175039984 - AluJo SINE Alu -1 311 5 604 289 38 30 chr4 9248678 9248881 -175039781 + L2 LINE L2 3106 3313 0 194 238 113 50 chr4 9249161 9249241 -175039421 + MIR3 SINE MIR 95 179 -29 203 333 26 39 chr4 9249705 9249858 -175038804 - MIR SINE MIR -84 178 28 * 226 352 69 21 chr4 9249856 9250001 -175038661 + L2 LINE L2 2899 3050 -222 222 302 0 0 chr4 9250395 9250448 -175038214 + L2 LINE L2 3213 3265 -7 271 310 136 19 chr4 9250578 9250733 -175037929 - MIR3 SINE MIR -21 187 15 265 469 40 6 chr4 9453901 9454076 -174834586 + MER5A DNA MER1_type 9 189 0 602 414 13 4 chr4 9455685 9455917 -174832745 + AluSp SINE Alu 2 235 -78 609 405 9 4 chr4 9458375 9458607 -174830055 + AluSg SINE Alu 64 296 -14 23 0 0 0 chr4 9458659 9458682 -174829980 + GC_rich Low_complexity Low_complexity 1 23 0 421 385 29 15 chr4 9459909 9460114 -174828548 - SVA Other Other -1045 341 134 198 0 0 0 chr4 9460211 9460233 -174828429 + (TAA)n Simple_repeat Simple_repeat 2 23 0 258 381 48 0 chr4 9460300 9460426 -174828236 + AluSq/x SINE Alu 2 133 -169 27 0 0 0 chr4 9461684 9461711 -174826951 + AT_rich Low_complexity Low_complexity 1 27 0 198 0 0 0 chr4 9462237 9462259 -174826403 + (CCG)n Simple_repeat Simple_repeat 2 23 0 681 338 90 63 chr4 9462677 9463278 -174825384 + L1M4 LINE L1 3676 4292 -1854 380 418 5 5 chr4 9463301 9463509 -174825153 + L1PA15 LINE L1 5807 6014 -151 23 0 0 0 chr4 9463788 9463811 -174824851 + AT_rich Low_complexity Low_complexity 1 23 0 474 461 11 7 chr4 9463878 9464158 -174824504 - AluSq SINE Alu -30 283 3 426 307 20 0 chr4 9465763 9465864 -174822798 - SVA Other Other -1091 295 193 354 373 75 0 chr4 9465864 9466025 -174822637 + FAM SINE Alu 1 173 -2 559 384 11 0 chr4 9467310 9467487 -174821175 - SVA Other Other -1076 310 132 301 298 53 0 chr4 9470394 9470488 -174818174 - L2 LINE L2 -1 3312 3214 269 279 0 0 chr4 9471365 9471444 -174817218 + A-rich Low_complexity Low_complexity 1 79 0 2418 102 0 9 chr4 9472622 9472937 -174815725 - AluSx SINE Alu 0 312 1 21 0 0 0 chr4 9472938 9472959 -174815703 + AT_rich Low_complexity Low_complexity 1 21 0 269 215 0 43 chr4 9473073 9473166 -174815496 + (TA)n Simple_repeat Simple_repeat 1 89 0 184 294 272 11 chr4 9476168 9476260 -174812402 - L2 LINE L2 -8 3264 3149 184 183 183 14 chr4 9476232 9476303 -174812359 + L3 LINE CR1 615 697 -880 * 198 273 18 0 chr4 9476302 9476357 -174812305 - MIR SINE MIR -48 214 159 2112 126 40 7 chr4 9476378 9476679 -174811983 + AluSx SINE Alu 1 311 -1 1147 211 72 7 chr4 9476923 9477227 -174811435 + MER33 DNA MER1_type 1 324 0 982 213 43 14 chr4 9477744 9477951 -174810711 - MIR SINE MIR -43 219 7 394 276 111 50 chr4 9477954 9478135 -174810527 - MIR SINE MIR -51 211 20 2425 99 3 0 chr4 9482005 9482308 -174806354 + AluSx SINE Alu 1 304 -8 2450 90 0 3 chr4 9482839 9483149 -174805513 - AluSx SINE Alu -3 309 1 280 336 118 8 chr4 9484294 9484413 -174804249 - L2 LINE L2 -8 3264 3133 259 253 0 25 chr4 9484654 9484733 -174803929 - L1ME LINE L1 -302 5819 5743 238 277 256 15 chr4 9484787 9484924 -174803738 - L2 LINE L2 -177 3095 2926 211 269 141 0 chr4 9485328 9485406 -174803256 - MIR SINE MIR -90 172 84 524 318 95 37 chr4 9485817 9486144 -174802518 - L2 LINE L2 -1 3312 2967 181 213 40 67 chr4 9486372 9486447 -174802215 - L2 LINE L2 -79 3234 3162 300 293 132 9 chr4 9486544 9486650 -174802012 - L2 LINE L2 -1 3271 3153 2298 111 3 0 chr4 9488069 9488366 -174800296 + AluSx SINE Alu 1 298 -14 2026 158 0 3 chr4 9488699 9489009 -174799653 + AluJb SINE Alu 1 309 -3 343 349 38 0 chr4 9489314 9489446 -174799216 - L2 LINE L2 -9 3263 3127 322 252 159 27 chr4 9490645 9490817 -174797845 - MIR3 SINE MIR -21 241 47 217 258 86 43 chr4 9491563 9491656 -174797006 - MIR SINE MIR -81 181 85 226 262 98 0 chr4 9491736 9491797 -174796865 - L2 LINE L2 -38 3275 3209 278 290 20 10 chr4 9491931 9492031 -174796631 - L2 LINE L2 -427 2887 2787 281 240 250 42 chr4 9492161 9492353 -174796309 + MIR SINE MIR 2 233 -29 533 335 62 0 chr4 9492770 9492964 -174795698 - MIR SINE MIR -30 232 27 435 236 149 43 chr4 9493420 9493581 -174795081 + MER5B DNA MER1_type 1 178 0 209 299 0 30 chr4 9494834 9494901 -174793761 + L2 LINE L2 3132 3196 -76 3563 38 11 27 chr4 9494986 9495437 -174793225 - MLT2A1 LTR ERVL 0 444 1 3564 79 24 31 chr4 9495437 9495641 -174793021 - HERVL-A1 LTR ERVL 0 5654 5450 2231 104 0 0 chr4 9495641 9495920 -174792742 + AluSx SINE Alu 1 279 -33 399 83 0 0 chr4 9495920 9495980 -174792682 + (CATA)n Simple_repeat Simple_repeat 1 60 0 3564 79 24 31 chr4 9495980 9496320 -174792342 - HERVL-A1 LTR ERVL -202 5452 5113 240 0 0 0 chr4 9496322 9496350 -174792312 - MLT2A2 LTR ERVL -422 31 4 330 347 75 17 chr4 9496468 9496762 -174791900 + L2 LINE L2 2386 2696 -618 558 179 125 9 chr4 9499429 9499541 -174789121 - FLAM_A SINE Alu -8 125 1 2279 97 30 0 chr4 9499579 9499879 -174788783 + AluSc SINE Alu 1 309 0 257 258 21 43 chr4 9499915 9500008 -174788654 - MIR3 SINE MIR -6 202 112 833 328 8 0 chr4 9500176 9500417 -174788245 - MIR SINE MIR 0 262 20 2190 131 3 6 chr4 9500451 9500765 -174787897 - AluSq SINE Alu 0 313 1 277 255 122 20 chr4 9500951 9501049 -174787613 + MIR SINE MIR 24 131 -131 1719 137 56 14 chr4 9501317 9501433 -174787229 + AluJb SINE Alu 1 111 -201 180 0 0 0 chr4 9501433 9501453 -174787209 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1719 137 56 14 chr4 9501453 9501621 -174787041 + AluJb SINE Alu 111 297 -15 2389 96 3 0 chr4 9502228 9502531 -174786131 + AluSx SINE Alu 1 304 -8 352 246 169 27 chr4 9502969 9503152 -174785510 + MIR SINE MIR 28 236 -26 2302 93 0 35 chr4 9503303 9503614 -174785048 + AluSq SINE Alu 1 300 -13 186 152 0 0 chr4 9504917 9504950 -174783712 - L2 LINE L2 -260 3053 3021 370 297 24 91 chr4 9505915 9506124 -174782538 - MIR SINE MIR -11 251 57 2250 91 7 0 chr4 9506623 9506910 -174781752 - AluSq SINE Alu -18 295 7 1282 164 9 13 chr4 9507068 9507083 -174781579 - AluJo SINE Alu -2 310 296 2473 85 0 0 chr4 9507083 9507389 -174781273 - AluSg SINE Alu -4 306 1 1282 164 9 13 chr4 9507389 9507599 -174781063 - AluJo SINE Alu -16 296 86 956 170 12 29 chr4 9507739 9507910 -174780752 - FRAM SINE Alu -9 167 1 2354 94 0 3 chr4 9508251 9508550 -174780112 - AluSq SINE Alu -15 298 1 1678 176 13 20 chr4 9508669 9508975 -174779687 - AluJb SINE Alu -6 306 3 1248 131 0 6 chr4 9508989 9509164 -174779498 - AluSg/x SINE Alu -5 307 134 2439 93 0 0 chr4 9509164 9509465 -174779197 - AluSg SINE Alu -9 301 1 1124 215 0 14 chr4 9509516 9509739 -174778923 - AluJo SINE Alu -5 307 88 320 283 88 11 chr4 9509889 9510014 -174778648 + MIR SINE MIR 51 181 -68 2137 122 0 3 chr4 9510389 9510684 -174777978 + AluSx SINE Alu 1 294 -18 1985 117 92 0 chr4 9512481 9512763 -174775899 + AluSx SINE Alu 1 308 -4 186 307 69 0 chr4 9513307 9513408 -174775254 + MER5A DNA MER1_type 37 144 -45 226 239 70 0 chr4 9513487 9513558 -174775104 + MIR SINE MIR 65 140 -122 295 321 58 15 chr4 9513638 9513775 -174774887 + MIR SINE MIR 116 258 -4 190 243 0 81 chr4 9514201 9514275 -174774387 - MIR SINE MIR -120 142 75 234 240 0 0 chr4 9514665 9514715 -174773947 - L2 LINE L2 -86 3186 3137 248 264 91 36 chr4 9514776 9514886 -174773776 + MIR SINE MIR 7 122 -140 832 188 58 34 chr4 9515080 9515288 -174773374 - MER20 DNA MER1_type 0 219 7 185 218 218 16 chr4 9515629 9515753 -174772909 - L2 LINE L2 -236 3036 2888 186 208 75 0 chr4 9515770 9515823 -174772839 + L2 LINE L2 3142 3198 -74 340 338 75 6 chr4 9515860 9516020 -174772642 + MIR SINE MIR 12 182 -80 1220 84 0 0 chr4 9516021 9516163 -174772499 + AluSq/x SINE Alu 1 142 -170 279 270 37 0 chr4 9516196 9516288 -174772374 - MIR SINE MIR -68 140 69 2265 121 0 0 chr4 9517986 9518283 -174770379 + AluSx SINE Alu 1 297 -15 2261 116 0 13 chr4 9518359 9518669 -174769993 - AluSg SINE Alu -4 306 1 223 196 20 0 chr4 9518839 9518890 -174769772 - L2 LINE L2 -1388 1926 1875 233 200 0 0 chr4 9519174 9519219 -174769443 - L2 LINE L2 -18 3254 3210 628 268 84 74 chr4 9519236 9519549 -174769113 - L2 LINE L2 0 3313 3005 2115 99 10 42 chr4 9519549 9519862 -174768800 + AluSx SINE Alu 1 303 -9 628 268 84 74 chr4 9519862 9520088 -174768574 - L2 LINE L2 -308 3005 2750 694 238 37 0 chr4 9520088 9520252 -174768410 - FAM SINE Alu -5 170 1 628 268 84 74 chr4 9520252 9520280 -174768382 - L2 LINE L2 -563 2750 2724 300 207 0 0 chr4 9520285 9520347 -174768315 - MLT1E3 LTR MaLR -5 619 565 25 0 0 0 chr4 9520381 9520406 -174768256 + AT_rich Low_complexity Low_complexity 1 25 0 265 279 0 63 chr4 9521012 9521202 -174767460 + GA-rich Low_complexity Low_complexity 3 180 0 * 335 293 11 29 chr4 9521093 9521267 -174767395 + A-rich Low_complexity Low_complexity 3 173 0 1617 195 0 10 chr4 9521301 9521593 -174767069 - AluJo SINE Alu -23 289 1 432 234 188 8 chr4 9521611 9521739 -174766923 - MLT1E1 LTR MaLR -503 151 1 1726 253 172 41 chr4 9521739 9522408 -174766254 - L2 LINE L2 -586 2728 2148 1845 110 49 0 chr4 9522408 9522671 -174765991 + AluSg SINE Alu 33 308 -2 1726 253 172 41 chr4 9522671 9522781 -174765881 - L2 LINE L2 -1166 2148 2054 1481 128 6 144 chr4 9522781 9523101 -174765561 + AluJb SINE Alu 1 276 -36 1726 253 172 41 chr4 9523101 9523253 -174765409 - L2 LINE L2 -1260 2054 1923 207 0 0 0 chr4 9523253 9523276 -174765386 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1726 253 172 41 chr4 9523276 9523467 -174765195 - L2 LINE L2 -1391 1923 1456 310 106 76 0 chr4 9523504 9523570 -174765092 + CT-rich Low_complexity Low_complexity 3 73 0 2355 108 0 0 chr4 9523634 9523929 -174764733 - AluSx SINE Alu -17 295 1 4246 165 45 12 chr4 9523961 9524787 -174763875 - L1MC1 LINE L1 0 6333 5481 794 186 3 43 chr4 9524865 9524884 -174763778 - MLT1A1 LTR MaLR 0 365 347 2367 94 3 19 chr4 9524884 9525202 -174763460 - AluSp SINE Alu 0 313 1 794 186 3 43 chr4 9525202 9525491 -174763171 - MLT1A1 LTR MaLR -18 347 1 366 262 210 15 chr4 9525513 9525784 -174762878 - L2 LINE L2 -1986 1328 1005 242 315 108 0 chr4 9527076 9527187 -174761475 + MIR3 SINE MIR 60 182 -26 215 284 196 7 chr4 9527769 9527917 -174760745 - L2 LINE L2 -228 3085 2910 849 200 51 0 chr4 9528090 9528285 -174760377 - MER3 DNA MER1_type -4 205 1 216 97 0 0 chr4 9528892 9528923 -174759739 + (TGAA)n Simple_repeat Simple_repeat 4 34 0 2275 109 3 0 chr4 9529166 9529470 -174759192 - AluSx SINE Alu -7 305 1 339 312 0 0 chr4 9531541 9531634 -174757028 + L2 LINE L2 2967 3059 -213 2681 48 3 3 chr4 9533452 9533765 -174754897 + AluSp SINE Alu 1 313 0 646 263 23 23 chr4 9533832 9534003 -174754659 - MER5B DNA MER1_type -5 173 3 370 310 41 35 chr4 9534078 9534223 -174754439 + L2 LINE L2 3167 3312 -1 2076 120 43 10 chr4 9534307 9534606 -174754056 - AluSg SINE Alu -1 309 1 361 242 62 4 chr4 9534671 9534787 -174753875 - MIR SINE MIR -62 146 30 2257 86 3 16 chr4 9535065 9535201 -174753461 + AluSx SINE Alu 1 137 -175 2470 67 0 3 chr4 9535201 9535498 -174753164 + AluY SINE Alu 1 296 -15 2257 86 3 16 chr4 9535498 9535665 -174752997 + AluSx SINE Alu 137 300 -12 672 315 67 10 chr4 9536151 9536465 -174752197 - L1ME3A LINE L1 -76 6094 5763 1661 74 30 0 chr4 9536693 9536895 -174751767 - AluSg/x SINE Alu -14 296 89 1905 105 86 4 chr4 9536901 9537168 -174751494 + AluSg SINE Alu 1 289 -21 306 67 22 0 chr4 9537168 9537213 -174751449 + Alu SINE Alu 1 46 -256 1595 260 115 50 chr4 9537213 9537386 -174751276 - L1ME3A LINE L1 -1427 4719 4559 2313 111 0 0 chr4 9537386 9537683 -174750979 + AluSx SINE Alu 1 297 -15 1595 260 115 50 chr4 9537683 9537881 -174750781 - L1ME3A LINE L1 -1587 4559 4375 2564 85 6 0 chr4 9537881 9538244 -174750418 - L1PA8 LINE L1 0 6172 5808 1595 260 115 50 chr4 9538244 9538943 -174749719 - L1ME3A LINE L1 -1771 4375 3579 2175 111 0 13 chr4 9538997 9539316 -174749346 + AluSx SINE Alu 5 312 0 639 198 48 0 chr4 9539376 9539502 -174749160 + FLAM_A SINE Alu 1 132 -1 280 245 53 0 chr4 9539748 9539842 -174748820 - L1ME3A LINE L1 -2573 3573 3475 720 217 44 6 chr4 9540160 9540340 -174748322 - MER5A DNA MER1_type 0 189 3 214 245 31 51 chr4 9540352 9540450 -174748212 + L2 LINE L2 3169 3264 -49 1134 146 34 0 chr4 9540821 9540999 -174747663 - AluSg/x SINE Alu 0 310 127 2397 107 0 0 chr4 9540999 9541308 -174747354 - AluSg1 SINE Alu 0 309 1 2638 19 6 35 chr4 9541325 9541640 -174747022 + AluY SINE Alu 1 306 -5 202 179 0 0 chr4 9541819 9541858 -174746804 + L2 LINE L2 3218 3256 -16 2214 102 0 14 chr4 9542597 9542890 -174745772 - AluSx SINE Alu -23 289 1 247 287 77 35 chr4 9543311 9543454 -174745208 + MIR SINE MIR 80 228 -34 355 279 74 16 chr4 9543986 9544108 -174744554 - L2 LINE L2 -5 3308 3180 333 241 58 0 chr4 9544129 9544216 -174744446 + MER69 DNA AcHobo 2435 2526 0 254 225 234 0 chr4 9544322 9544433 -174744229 - Charlie8 DNA MER1_type -2245 172 36 1468 159 40 0 chr4 9545656 9545883 -174742779 + AluJb SINE Alu 42 277 -35 206 0 69 0 chr4 9545890 9545919 -174742743 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 264 59 0 0 chr4 9546355 9546389 -174742273 + (CA)n Simple_repeat Simple_repeat 1 34 0 1750 166 6 32 chr4 9546406 9546720 -174741942 - AluJo SINE Alu -6 306 1 2662 20 0 7 chr4 9546875 9547170 -174741492 - AluYa5 SINE Alu -18 293 1 1921 158 0 32 chr4 9548067 9548377 -174740285 - AluJb SINE Alu -12 300 1 2166 97 7 7 chr4 9551791 9552081 -174736581 - AluSx SINE Alu -22 290 1 539 93 0 0 chr4 9552597 9552672 -174735990 - AluJ/FRAM SINE Alu -8 304 230 1068 259 15 23 chr4 9552802 9553145 -174735517 - L1MC4 LINE L1 -2 8040 7701 1192 112 0 12 chr4 9553146 9553307 -174735355 - AluSg/x SINE Alu -17 295 137 767 218 34 10 chr4 9553308 9553514 -174735148 - L1MC4 LINE L1 -414 7628 7418 1040 219 138 12 chr4 9553551 9553797 -174734865 - AluJo SINE Alu -30 282 6 1582 214 163 12 chr4 9553800 9554286 -174734376 - L1MC4 LINE L1 -654 7388 6830 366 303 68 25 chr4 9554555 9554717 -174733945 - MIR SINE MIR -74 188 20 2518 82 0 0 chr4 9554789 9555094 -174733568 - AluY SINE Alu -6 305 1 636 287 27 27 chr4 9556354 9556577 -174732085 - MIR SINE MIR -12 250 28 2484 80 0 0 chr4 9557391 9557690 -174730972 - AluY SINE Alu -12 299 1 935 261 30 4 chr4 9558194 9558428 -174730234 + MIR SINE MIR 2 241 -21 247 290 167 14 chr4 9559101 9559239 -174729423 + MIR SINE MIR 9 167 -95 809 250 11 0 chr4 9559627 9559811 -174728851 + MER5A DNA MER1_type 1 186 -3 382 200 265 6 chr4 9560354 9560524 -174728138 + L2 LINE L2 1915 2128 -1186 1363 59 53 0 chr4 9560561 9560748 -174727914 - MER107 DNA MER1_type 0 197 1 315 401 16 29 chr4 9561452 9561694 -174726968 + L1MDa LINE L1 21 259 -6281 2302 116 0 0 chr4 9561798 9562100 -174726562 - AluSx SINE Alu -1 311 10 975 227 74 83 chr4 9562582 9562858 -174725804 + L1MDa LINE L1 913 1190 -5351 2221 117 0 7 chr4 9562858 9563199 -174725463 - AluSx SINE Alu 0 312 1 2074 129 3 7 chr4 9563201 9563496 -174725166 - AluJb SINE Alu -18 294 1 975 227 74 83 chr4 9563496 9563794 -174724868 + L1MDa LINE L1 1191 1440 -5101 628 263 0 11 chr4 9563797 9563972 -174724690 + AluSq SINE Alu 2 174 -139 356 322 66 62 chr4 9564010 9564278 -174724384 - L1M4 LINE L1 -2745 3401 3130 189 0 0 0 chr4 9564278 9564299 -174724363 + (C)n Simple_repeat Simple_repeat 1 21 0 356 322 66 62 chr4 9564299 9564350 -174724312 - L1M4 LINE L1 -3016 3130 3081 253 236 97 0 chr4 9565561 9565633 -174723029 + L2 LINE L2 3234 3312 -1 195 220 0 0 chr4 9567718 9567768 -174720894 + (CGTG)n Simple_repeat Simple_repeat 2 51 0 6965 131 38 26 chr4 9569197 9570230 -174718432 - HSMAR2 DNA Mariner -1 1301 250 2354 100 0 10 chr4 9570230 9570531 -174718131 + AluSc SINE Alu 1 298 -11 6965 131 38 26 chr4 9570531 9570740 -174717922 - HSMAR2 DNA Mariner -1052 250 45 1460 172 75 4 chr4 9570742 9571010 -174717652 - AluJo SINE Alu -24 288 2 362 199 202 17 chr4 9571073 9571208 -174717454 - AluSq SINE Alu -48 255 107 560 240 157 23 chr4 9571592 9571809 -174716853 - MIR SINE MIR 0 262 17 2288 87 7 3 chr4 9571859 9572148 -174716514 + AluSx SINE Alu 3 292 -20 342 282 40 16 chr4 9572197 9572321 -174716341 + MIR SINE MIR 80 206 -56 2531 140 56 22 chr4 9572329 9572643 -174716019 - MER4C LTR ERV1 0 465 130 1590 138 109 4 chr4 9572643 9572918 -174715744 - AluJb SINE Alu -8 304 1 2531 140 56 22 chr4 9572918 9573053 -174715609 - MER4C LTR ERV1 -335 130 1 2272 93 100 28 chr4 9575408 9575807 -174712855 + MSTA LTR MaLR 1 428 0 2025 153 59 50 chr4 9576115 9576307 -174712355 - MSTA LTR MaLR 0 428 239 2406 96 0 0 chr4 9576307 9576599 -174712063 - AluSp SINE Alu -21 292 1 2025 153 59 50 chr4 9576599 9576830 -174711832 - MSTA LTR MaLR -189 239 1 206 333 15 0 chr4 9576989 9577055 -174711607 - L2 LINE L2 -5 3308 3242 278 240 91 50 chr4 9577700 9577821 -174710841 + MIR SINE MIR 20 145 -117 1929 138 7 10 chr4 9578177 9578473 -174710189 + AluJb SINE Alu 14 308 -4 368 265 99 88 chr4 9578989 9579272 -174709390 + L1MC5 LINE L1 7639 7924 -37 1487 138 104 4 chr4 9579299 9579539 -174709123 + AluJo SINE Alu 37 300 -12 2048 132 26 3 chr4 9580236 9580540 -174708122 + AluSx SINE Alu 1 311 -1 2345 103 0 6 chr4 9580556 9580867 -174707795 + AluSx SINE Alu 1 309 -3 278 238 188 0 chr4 9581128 9581229 -174707433 + MIR SINE MIR 34 153 -55 212 281 22 45 chr4 9581329 9581359 -174707303 - MIR SINE MIR -70 192 163 1979 147 0 26 chr4 9581359 9581671 -174706991 - AluJo SINE Alu -8 304 1 212 281 22 45 chr4 9581671 9581729 -174706933 - MIR SINE MIR -99 163 106 244 281 34 22 chr4 9581787 9581876 -174706786 + L1ME4a LINE L1 5963 6052 -69 1178 150 0 11 chr4 9581889 9582076 -174706586 - AluSg/x SINE Alu -6 304 120 1686 173 8 4 chr4 9582123 9582389 -174706273 + AluJb SINE Alu 1 267 -45 2389 79 3 10 chr4 9584985 9585290 -174703372 + AluSp SINE Alu 1 303 -10 200 323 0 0 chr4 9585484 9585546 -174703116 + MIR SINE MIR 82 143 -119 337 264 33 137 chr4 9585669 9585724 -174702938 - L1ME4a LINE L1 -14 6107 6048 1719 149 39 62 chr4 9585724 9585875 -174702787 + AluJb SINE Alu 1 143 -169 2044 116 42 3 chr4 9585875 9586160 -174702502 + AluSx SINE Alu 1 296 -16 1719 149 39 62 chr4 9586160 9586317 -174702345 + AluJb SINE Alu 143 302 -10 337 264 33 137 chr4 9586317 9586443 -174702219 - L1ME4a LINE L1 -73 6048 5945 211 224 0 35 chr4 9586493 9586551 -174702111 + MIR SINE MIR 106 161 -101 1961 157 3 0 chr4 9586551 9586851 -174701811 + AluJo SINE Alu 1 301 -11 2357 79 3 25 chr4 9586992 9587307 -174701355 - AluY SINE Alu -3 308 1 280 216 72 36 chr4 9588588 9588699 -174699963 + MIR3 SINE MIR 87 201 -7 2108 138 0 3 chr4 9588761 9589072 -174699590 - AluJb SINE Alu -2 310 1 242 337 47 0 chr4 9590764 9590850 -174697812 - L2 LINE L2 -40 3232 3143 192 294 88 0 chr4 9590913 9591015 -174697647 + MIR SINE MIR 33 143 -65 444 268 150 0 chr4 9591084 9591237 -174697425 - MER5B DNA MER1_type 0 178 3 405 215 0 13 chr4 9594967 9595046 -174693616 - FLAM SINE Alu -7 126 49 23 0 0 0 chr4 9595390 9595413 -174693249 + AT_rich Low_complexity Low_complexity 1 23 0 283 233 55 0 chr4 9596267 9596340 -174692322 - MER46A DNA MER2_type -1 235 159 309 257 14 0 chr4 9596340 9596414 -174692248 - Tigger3(Golem) DNA MER2_type 0 3037 2963 366 303 68 25 chr4 9596677 9596839 -174691823 + MIR SINE MIR 20 188 -74 1508 218 166 12 chr4 9597108 9597590 -174691072 + L1MC4 LINE L1 6830 7385 -657 2532 70 0 0 chr4 9597595 9597896 -174690766 + AluY SINE Alu 6 306 -5 222 149 43 0 chr4 9598210 9598257 -174690405 + MIR SINE MIR 105 153 -55 626 276 22 0 chr4 9598409 9598590 -174690072 - AluSp SINE Alu -118 195 11 667 285 45 58 chr4 9598600 9598912 -174689750 + L2 LINE L2 3006 3313 0 234 200 0 0 chr4 9598929 9598974 -174689688 + L2 LINE L2 3210 3254 -18 1440 120 0 0 chr4 9599483 9599683 -174688979 + AluSg SINE Alu 1 200 -110 535 138 0 12 chr4 9600388 9600468 -174688194 - AluJ/FLAM SINE Alu -232 80 2 730 178 0 0 chr4 9600469 9600604 -174688058 - MER4C LTR ERV1 -330 135 1 207 196 0 69 chr4 9601702 9601804 -174686858 + (CACAC)n Simple_repeat Simple_repeat 1 95 0 * 494 189 19 36 chr4 9601744 9602138 -174686524 + (CA)n Simple_repeat Simple_repeat 1 387 0 266 190 16 38 chr4 9602230 9602414 -174686248 + (CA)n Simple_repeat Simple_repeat 1 180 0 2098 123 0 0 chr4 9602644 9602945 -174685717 - AluSg SINE Alu -9 301 1 1975 161 0 0 chr4 9602951 9603261 -174685401 - AluJb SINE Alu -2 310 1 180 356 8 51 chr4 9603557 9603675 -174684987 - MIR SINE MIR -42 220 108 1946 113 3 53 chr4 9606802 9607121 -174681541 - AluSq SINE Alu -10 303 1 2092 125 0 0 chr4 9607124 9607421 -174681241 - AluSx SINE Alu -15 297 1 1012 150 0 0 chr4 9607751 9607911 -174680751 + AluSg/x SINE Alu 144 303 -6 2378 69 3 0 chr4 9608037 9608341 -174680321 + AluY SINE Alu 1 305 -6 2640 85 16 6 chr4 9608361 9608727 -174679935 + THE1C LTR MaLR 1 370 -5 1608 208 6 12 chr4 9608844 9609181 -174679481 - MLT1A1 LTR MaLR 0 365 31 2211 94 0 7 chr4 9609559 9609857 -174678805 - AluSq SINE Alu -17 296 1 1949 133 26 0 chr4 9609873 9610175 -174678487 - AluSx SINE Alu -2 310 1 1373 145 103 4 chr4 9610870 9611112 -174677550 - AluJo SINE Alu -10 302 37 399 265 99 88 chr4 9611139 9611422 -174677240 - L1MC5 LINE L1 -37 7924 7639 1814 142 7 10 chr4 9611938 9612234 -174676428 - AluJb SINE Alu -4 308 14 297 240 91 50 chr4 9612590 9612711 -174675951 - MIR SINE MIR -117 145 20 2227 156 59 45 chr4 9613581 9613812 -174674850 + MSTA LTR MaLR 1 242 -186 2268 99 0 0 chr4 9613812 9614106 -174674556 + AluSp SINE Alu 1 294 -19 2227 156 59 45 chr4 9614106 9614296 -174674366 + MSTA LTR MaLR 242 428 0 2461 93 101 25 chr4 9614604 9615002 -174673660 - MSTA LTR MaLR 0 428 1 338 273 36 43 chr4 9616886 9617025 -174671637 + MIR3 SINE MIR 9 146 -62 431 308 33 54 chr4 9617134 9617374 -174671288 + L1M4b LINE L1 11 245 -6614 316 333 130 10 chr4 9617643 9617835 -174670827 + L1M4b LINE L1 1029 1243 -5612 336 284 0 53 chr4 9617835 9617930 -174670732 + L1MC4 LINE L1 6614 6703 -1339 325 230 81 0 chr4 9617917 9617991 -174670671 + L1M4b LINE L1 2523 2602 -4355 * 25 31 0 0 chr4 9618610 9618642 -174670020 + AT_rich Low_complexity Low_complexity 1 32 0 543 267 82 19 chr4 9618795 9619001 -174669661 - MER20 DNA MER1_type 0 219 1 2475 39 0 20 chr4 9619390 9619695 -174668967 - AluY SINE Alu -12 299 1 360 333 49 27 chr4 9619762 9619987 -174668675 + MIR SINE MIR 31 260 -2 542 286 38 72 chr4 9622210 9622472 -174666190 + MER112 DNA MER1_type 2 254 -2 366 322 6 76 chr4 9622570 9622665 -174665997 - MIR3 SINE MIR -50 158 132 2092 124 3 0 chr4 9622665 9622971 -174665691 + AluSx SINE Alu 1 307 -5 366 322 6 76 chr4 9622971 9623077 -174665585 - MIR3 SINE MIR -76 132 20 2281 82 3 0 chr4 9624663 9624967 -174663695 - AluY SINE Alu -6 305 1 227 228 101 13 chr4 9625655 9625734 -174662928 - MIR SINE MIR -60 148 63 307 290 32 11 chr4 9626834 9626927 -174661735 + MIR SINE MIR 51 145 -63 597 213 107 6 chr4 9629932 9630101 -174658561 + MER5A DNA MER1_type 1 186 -3 24 32 0 0 chr4 9630165 9630196 -174658466 + AT_rich Low_complexity Low_complexity 1 31 0 2340 70 0 0 chr4 9630579 9630864 -174657798 + AluSc SINE Alu 3 287 -22 2143 109 0 13 chr4 9631189 9631501 -174657161 - AluSq SINE Alu -5 308 1 227 228 101 13 chr4 9632188 9632267 -174656395 - MIR SINE MIR -60 148 63 307 290 32 11 chr4 9633367 9633460 -174655202 + MIR SINE MIR 51 145 -63 358 206 75 9 chr4 9635386 9635493 -174653169 + L1MD1 LINE L1 4784 4897 -1249 1377 253 39 120 chr4 9635495 9635809 -174652853 + L1MD1 LINE L1 5254 5592 -650 1873 170 3 3 chr4 9635809 9636120 -174652542 + AluSx SINE Alu 1 311 -1 1377 253 39 120 chr4 9636120 9636168 -174652494 + L1MD1 LINE L1 5592 5642 -600 1853 155 0 3 chr4 9636168 9636465 -174652197 - AluJb SINE Alu -6 306 11 1377 253 39 120 chr4 9636465 9636918 -174651744 + L1MD1 LINE L1 5642 6004 -238 * 1928 237 58 8 chr4 9636544 9637063 -174651599 + L1MB8 LINE L1 5625 6169 -9 2609 42 0 0 chr4 9637066 9637375 -174651287 - AluY SINE Alu -2 309 1 247 306 24 0 chr4 9637422 9637507 -174651155 - L2 LINE L2 -1 3312 3226 310 321 30 48 chr4 9637584 9637752 -174650910 - MIR SINE MIR -91 171 7 1273 213 84 3 chr4 9638018 9638314 -174650348 + MLT1C LTR MaLR 140 459 -8 2087 92 0 7 chr4 9638736 9639055 -174649607 + AluSx SINE Alu 1 317 0 1506 213 33 0 chr4 9639061 9639361 -174649301 + AluJb SINE Alu 3 312 0 361 267 199 6 chr4 9639450 9639611 -174649051 + MER117 DNA MER1_type 3 194 -3 1665 191 10 93 chr4 9640444 9640852 -174647810 + MLT1A2 LTR MaLR 1 374 0 2386 57 0 13 chr4 9640958 9641257 -174647405 - AluY SINE Alu -16 295 1 378 283 20 108 chr4 9641421 9641672 -174646990 + L2 LINE L2 2953 3181 -91 404 298 67 8 chr4 9642065 9642209 -174646453 - MIR SINE MIR -56 152 20 180 322 34 0 chr4 9643135 9643194 -174645468 - L2 LINE L2 -5 3267 3207 494 289 72 4 chr4 9643249 9643484 -174645178 - LTR33 LTR ERVL -36 485 235 679 246 7 0 chr4 9643494 9643636 -174645026 + MLT1C LTR MaLR 321 463 -4 2117 185 45 9 chr4 9644254 9644698 -174643964 - MLT1C LTR MaLR -7 460 1 259 229 212 33 chr4 9645885 9646000 -174642662 - MIR SINE MIR -45 163 32 1102 162 33 50 chr4 9646221 9646462 -174642200 - L1MA6 LINE L1 -2 6298 6062 330 130 4 2 chr4 9646462 9646711 -174641951 + AluJo SINE Alu 1 302 0 406 194 153 0 chr4 9646714 9646812 -174641850 - L1MA6 LINE L1 -225 6075 5963 223 62 0 0 chr4 9646823 9646855 -174641807 + (TTTTG)n Simple_repeat Simple_repeat 2 165 0 2105 96 7 0 chr4 9646855 9647135 -174641527 - AluSg SINE Alu -1 313 1 1889 158 5 25 chr4 9647139 9647507 -174641155 - L1 LINE L1 -871 5275 4915 1812 152 0 26 chr4 9648310 9648613 -174640049 + AluSx SINE Alu 1 295 -17 1467 208 31 0 chr4 9648618 9648935 -174639727 + MLT1C LTR MaLR 1 327 -140 * 1557 236 43 10 chr4 9648921 9649319 -174639343 + MER67A LTR ERV1 5 415 -128 698 110 176 73 chr4 9649322 9649458 -174639204 + AluJo SINE Alu 2 151 -161 544 103 0 0 chr4 9649481 9649559 -174639103 - AluJb SINE Alu -81 231 154 244 365 48 0 chr4 9649937 9650041 -174638621 + L2 LINE L2 3180 3288 -25 258 106 0 0 chr4 9650050 9650097 -174638565 + (TGAA)n Simple_repeat Simple_repeat 2 48 0 427 176 0 0 chr4 9651002 9651076 -174637586 - MIR SINE MIR -110 152 79 251 175 140 0 chr4 9651500 9651557 -174637105 + MIR SINE MIR 81 145 -117 458 145 0 0 chr4 9651617 9651686 -174636976 - THE1C LTR MaLR 0 375 307 1916 148 0 13 chr4 9651686 9651996 -174636666 - AluSx SINE Alu -1 311 6 244 260 0 0 chr4 9652100 9652150 -174636512 + (TGG)n Simple_repeat Simple_repeat 2 51 0 197 342 0 0 chr4 9654256 9654332 -174634330 + L2 LINE L2 3197 3272 0 261 119 0 0 chr4 9654332 9654374 -174634288 + (TGAG)n Simple_repeat Simple_repeat 2 43 0 242 267 91 53 chr4 9655626 9655813 -174632849 + L2 LINE L2 3031 3224 -89 2183 229 53 58 chr4 9655916 9656553 -174632109 + L1ME1 LINE L1 5491 6126 -40 2268 95 0 3 chr4 9656553 9656858 -174631804 + AluSq SINE Alu 1 304 -9 2183 229 53 58 chr4 9656858 9656894 -174631768 + L1ME1 LINE L1 6126 6161 -5 240 86 0 0 chr4 9659198 9659233 -174629429 + (TGAA)n Simple_repeat Simple_repeat 3 37 0 621 292 35 42 chr4 9659260 9659520 -174629142 + Charlie8 DNA MER1_type 1 258 -2159 260 146 0 139 chr4 9659688 9659839 -174628823 + (CCCCAG)n Simple_repeat Simple_repeat 3 132 0 203 262 16 16 chr4 9661269 9661330 -174627332 + MIR SINE MIR 81 141 -67 254 224 17 0 chr4 9661434 9661492 -174627170 + L2 LINE L2 2997 3055 -217 186 43 0 0 chr4 9661670 9661693 -174626969 + (TTCA)n Simple_repeat Simple_repeat 2 24 0 239 268 67 41 chr4 9662309 9662489 -174626173 + MIR SINE MIR 7 150 -58 305 269 54 0 chr4 9662904 9662997 -174625665 + MIR SINE MIR 104 201 -61 6889 58 29 2 chr4 9663047 9664072 -174624590 + L1PA7 LINE L1 5106 6153 -1 671 273 109 16 chr4 9664082 9664459 -174624203 - LTR33 LTR ERVL -65 456 45 297 295 11 11 chr4 9664545 9664640 -174624022 - MIR3 SINE MIR -49 159 65 198 0 0 0 chr4 9665003 9665025 -174623637 + (TTCA)n Simple_repeat Simple_repeat 3 24 0 211 254 0 17 chr4 9665100 9665159 -174623503 - MIR SINE MIR -56 152 95 184 327 84 0 chr4 9665427 9665534 -174623128 - MIR SINE MIR -145 117 2 418 234 21 0 chr4 9666244 9666338 -174622324 + MIR SINE MIR 2 97 -165 205 308 33 11 chr4 9668597 9668688 -174619974 + L2 LINE L2 2886 2978 -335 221 300 44 22 chr4 9668820 9668910 -174619752 + L2 LINE L2 3177 3268 -45 628 233 7 0 chr4 9668910 9669060 -174619602 - L1 LINE L1 -1764 4382 4232 * 2358 145 0 3 chr4 9669059 9669439 -174619223 + L1PB3 LINE L1 5734 6112 -42 198 103 0 0 chr4 9669585 9669614 -174619048 + (CACCAT)n Simple_repeat Simple_repeat 4 32 0 655 116 0 101 chr4 9669625 9669824 -174618838 + (CACCAT)n Simple_repeat Simple_repeat 1 179 0 655 116 0 101 chr4 9669838 9670037 -174618625 + (CACCAT)n Simple_repeat Simple_repeat 1 179 0 340 97 32 0 chr4 9670049 9670111 -174618551 + (CACCAT)n Simple_repeat Simple_repeat 5 68 0 688 176 23 6 chr4 9670122 9670298 -174618364 + (CACCAT)n Simple_repeat Simple_repeat 1 179 0 208 107 0 0 chr4 9670298 9670326 -174618336 + (CAT)n Simple_repeat Simple_repeat 1 28 0 318 317 137 22 chr4 9670835 9671018 -174617644 - MIR SINE MIR -6 256 53 608 310 70 0 chr4 9671062 9671275 -174617387 + MIR SINE MIR 35 262 0 220 98 0 59 chr4 9672365 9672416 -174616246 + (TTCC)n Simple_repeat Simple_repeat 4 51 0 249 318 163 20 chr4 9672651 9673050 -174615612 + L2 LINE L2 2817 3272 0 599 365 73 0 chr4 9673110 9673466 -174615196 + L3 LINE CR1 767 1148 -429 581 324 14 19 chr4 9673479 9673692 -174614970 + MIR SINE MIR 8 219 -43 1522 141 94 7 chr4 9674907 9675184 -174613478 + THE1B LTR MaLR 1 301 -63 930 207 45 21 chr4 9675969 9676211 -174612451 - ORSL DNA AcHobo -20 255 8 235 364 79 0 chr4 9677334 9677474 -174611188 + MIR SINE MIR 87 237 -25 563 250 6 0 chr4 9679196 9679870 -174608792 + (CA)n Simple_repeat Simple_repeat 1 678 0 557 232 6 0 chr4 9679887 9680055 -174608607 + (CA)n Simple_repeat Simple_repeat 2 170 0 629 232 0 6 chr4 9680071 9680395 -174608267 + (CA)n Simple_repeat Simple_repeat 1 321 0 228 262 0 0 chr4 9680918 9680979 -174607683 - L1MB3 LINE L1 -1 6182 6122 235 294 73 0 chr4 9681817 9681926 -174606736 - L2 LINE L2 0 3272 3156 198 195 0 0 chr4 9683342 9683383 -174605279 - MIR SINE MIR -113 149 109 261 326 47 0 chr4 9683987 9684073 -174604589 + MIR3 SINE MIR 97 186 -22 574 250 8 15 chr4 9684254 9684386 -174604276 - MER45A DNA AcHobo -2 176 46 2169 95 3 3 chr4 9686193 9686487 -174602175 - AluSq SINE Alu -19 294 1 244 211 18 0 chr4 9687306 9687363 -174601299 - L2 LINE L2 -211 3061 3004 1168 220 90 52 chr4 9688198 9688530 -174600132 + MLT1C LTR MaLR 2 360 -107 2218 102 0 0 chr4 9688530 9688825 -174599837 - AluSc SINE Alu -14 295 1 1168 220 90 52 chr4 9688825 9688938 -174599724 + MLT1C LTR MaLR 360 467 0 345 348 0 0 chr4 9689056 9689145 -174599517 - L1MC4 LINE L1 -1340 6702 6614 * 372 280 38 0 chr4 9689065 9689181 -174599481 + L1MC4 LINE L1 1996 6983 -1339 2115 96 4 0 chr4 9689194 9689475 -174599187 - AluSx SINE Alu -30 282 1 21 0 0 0 chr4 9689477 9689498 -174599164 + AT_rich Low_complexity Low_complexity 1 21 0 8968 248 58 23 chr4 9689503 9690658 -174598004 + L1MD1 LINE L1 1217 2330 -4627 2219 117 3 0 chr4 9690658 9690965 -174597697 + AluSx SINE Alu 1 308 -4 8968 248 58 23 chr4 9690965 9693496 -174595166 + L1MD1 LINE L1 2330 5145 -1812 2505 64 0 3 chr4 9693496 9693808 -174594854 + AluY SINE Alu 1 311 0 8968 248 58 23 chr4 9693808 9694393 -174594269 + L1MD1 LINE L1 5145 5708 -1249 1407 252 39 120 chr4 9694395 9694709 -174593953 + L1MD1 LINE L1 6065 6403 -650 1907 164 3 3 chr4 9694709 9695019 -174593643 + AluSx SINE Alu 1 310 -2 1407 252 39 120 chr4 9695019 9695067 -174593595 + L1MD1 LINE L1 6403 6453 -600 1853 155 0 3 chr4 9695067 9695364 -174593298 - AluJb SINE Alu -6 306 11 1407 252 39 120 chr4 9695364 9695817 -174592845 + L1MD1 LINE L1 6453 6815 -238 * 2048 246 32 4 chr4 9695443 9695981 -174592681 + L1MB8 LINE L1 6436 6990 -5 2660 35 0 0 chr4 9695991 9696302 -174592360 - AluY SINE Alu 0 311 1 263 315 22 0 chr4 9696349 9696441 -174592221 - L2 LINE L2 -1 3312 3219 352 333 24 42 chr4 9696511 9696679 -174591983 - MIR SINE MIR -91 171 7 1167 213 84 3 chr4 9696945 9697241 -174591421 + MLT1C LTR MaLR 140 459 -8 2111 92 0 7 chr4 9697663 9697982 -174590680 + AluSx SINE Alu 1 317 0 1559 213 33 0 chr4 9697988 9698288 -174590374 + AluJb SINE Alu 3 312 0 311 253 208 7 chr4 9698377 9698531 -174590131 + MER117 DNA MER1_type 3 187 -10 1693 189 10 93 chr4 9699371 9699779 -174588883 + MLT1A2 LTR MaLR 1 374 0 2392 60 0 13 chr4 9699885 9700184 -174588478 - AluY SINE Alu -16 295 1 391 287 20 108 chr4 9700348 9700599 -174588063 + L2 LINE L2 2953 3181 -91 441 323 72 7 chr4 9700913 9701136 -174587526 - MIR SINE MIR 0 262 20 193 410 119 11 chr4 9701351 9701612 -174587050 - L2 LINE L2 -345 2969 2681 191 322 34 0 chr4 9702062 9702121 -174586541 - L2 LINE L2 -5 3267 3207 426 289 72 4 chr4 9702176 9702411 -174586251 - LTR33 LTR ERVL -36 485 235 634 250 7 0 chr4 9702421 9702565 -174586097 + MLT1C LTR MaLR 321 465 -2 1977 182 45 9 chr4 9703181 9703625 -174585037 - MLT1C LTR MaLR -7 460 1 230 224 22 62 chr4 9704317 9704496 -174584166 + (CACCT)n Simple_repeat Simple_repeat 5 176 0 207 221 11 79 chr4 9704534 9704724 -174583938 + (CACCT)n Simple_repeat Simple_repeat 4 180 0 246 290 183 30 chr4 9704769 9704900 -174583762 - MIR SINE MIR -80 182 32 1106 162 33 50 chr4 9705121 9705362 -174583300 - L1MA6 LINE L1 -2 6298 6062 331 122 4 2 chr4 9705362 9705611 -174583051 + AluJo SINE Alu 1 302 0 373 194 153 0 chr4 9705614 9705712 -174582950 - L1MA6 LINE L1 -225 6075 5963 2108 104 7 0 chr4 9705731 9706035 -174582627 - AluSg SINE Alu 0 306 1 1752 163 5 25 chr4 9706039 9706407 -174582255 - L1MA6 LINE L1 -871 5275 4915 1852 152 0 26 chr4 9707210 9707513 -174581149 + AluSx SINE Alu 1 295 -17 1365 208 31 0 chr4 9707518 9707835 -174580827 + MLT1C LTR MaLR 1 327 -140 * 1453 231 43 10 chr4 9707821 9708219 -174580443 + MER67A LTR ERV1 5 415 -128 716 109 175 73 chr4 9708221 9708358 -174580304 + AluJo SINE Alu 1 151 -161 552 103 0 0 chr4 9708381 9708459 -174580203 - AluJb SINE Alu -81 231 154 292 266 73 139 chr4 9708508 9708948 -174579714 + L2 LINE L2 2844 3254 -18 282 29 0 0 chr4 9708950 9708985 -174579677 + (TGAA)n Simple_repeat Simple_repeat 2 36 0 364 355 49 16 chr4 9709432 9709615 -174579047 - L1ME4a LINE L1 -8 6113 5925 1550 154 50 50 chr4 9709769 9710067 -174578595 + AluJo SINE Alu 1 298 -14 228 344 135 23 chr4 9710166 9710381 -174578281 - L2 LINE L2 0 3313 3075 231 250 14 14 chr4 9710793 9710865 -174577797 + LTR16C LTR ERVL 418 489 -2 298 289 12 0 chr4 9710902 9710985 -174577677 - L2 LINE L2 -276 3037 2954 757 245 0 16 chr4 9710985 9711177 -174577485 - MLT1A1 LTR MaLR 0 365 177 1489 133 3 98 chr4 9711178 9711563 -174577099 - MER4A LTR ERV1 0 664 257 375 165 94 0 chr4 9711563 9711648 -174577014 - MER4A LTR ERV1 -571 93 1 * 737 239 5 11 chr4 9711648 9711828 -174576834 - MLT1A1 LTR MaLR -186 179 1 1418 242 35 113 chr4 9711829 9712407 -174576255 - L2 LINE L2 -359 2955 2423 1668 261 60 12 chr4 9712614 9713096 -174575566 - MLT1D LTR MaLR 0 505 1 432 339 63 27 chr4 9713567 9713788 -174574874 - MIR SINE MIR -6 256 28 718 196 35 30 chr4 9714054 9714253 -174574409 + MLT2D LTR ERVL 208 407 -7 362 270 40 24 chr4 9714255 9714381 -174574281 + L1MC4 LINE L1 7785 7912 -130 189 213 0 0 chr4 9714381 9714428 -174574234 + (TG)n Simple_repeat Simple_repeat 2 48 0 312 296 92 35 chr4 9714450 9714592 -174574070 + L1MC4 LINE L1 6595 6744 -1298 303 248 38 29 chr4 9716183 9716288 -174572374 + L1ME3A LINE L1 5664 5769 -401 469 246 12 76 chr4 9716295 9716466 -174572196 + L1ME3A LINE L1 6006 6165 -5 929 160 7 7 chr4 9716513 9716663 -174571999 + FRAM SINE Alu 2 151 -15 339 403 31 13 chr4 9716960 9717278 -174571384 + L1MC/D LINE L1 5449 5772 -2036 2392 66 0 3 chr4 9717333 9717635 -174571027 + AluY SINE Alu 1 301 -10 798 96 52 0 chr4 9718669 9718784 -174569878 - L1PA11 LINE L1 0 6174 6054 505 264 109 10 chr4 9718832 9719033 -174569629 + MLT1C LTR MaLR 240 460 -7 830 160 20 85 chr4 9720355 9720440 -174568222 - MLT1B LTR MaLR -203 187 98 2231 123 0 0 chr4 9720440 9720750 -174567912 - AluSx SINE Alu -2 310 1 830 160 20 85 chr4 9720750 9720864 -174567798 - MLT1B LTR MaLR -292 98 1 760 321 4 20 chr4 9721562 9721814 -174566848 + MIR SINE MIR 15 262 0 1958 184 34 50 chr4 9722989 9723407 -174565255 - MLT2D LTR ERVL 0 414 4 475 253 266 0 chr4 9723814 9723972 -174564690 - MIR SINE MIR -25 237 38 499 146 115 0 chr4 9724140 9724236 -174564426 + MER53 DNA DNA 1 107 -82 208 254 111 0 chr4 9724584 9724647 -174564015 + MIR SINE MIR 113 182 -80 591 258 82 6 chr4 9725079 9725238 -174563424 + MIR SINE MIR 44 214 -48 556 317 138 43 chr4 9725368 9725649 -174563013 - L1ME4a LINE L1 -109 6012 5673 2469 52 0 13 chr4 9725649 9725955 -174562707 - AluY SINE Alu -9 302 1 556 317 138 43 chr4 9725955 9726074 -174562588 - L1ME4a LINE L1 -448 5673 5567 23 68 0 0 chr4 9726291 9726335 -174562327 + AT_rich Low_complexity Low_complexity 1 44 0 397 314 84 30 chr4 9726763 9726861 -174561801 + L1M4 LINE L1 2924 3015 -3131 2165 103 3 3 chr4 9726861 9727163 -174561499 - AluSc SINE Alu -7 302 1 397 314 84 30 chr4 9727163 9727623 -174561039 + L1M4 LINE L1 3015 3516 -2630 1846 147 39 23 chr4 9727623 9727758 -174560904 + AluSx SINE Alu 1 132 -180 207 0 0 0 chr4 9727758 9727781 -174560881 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1846 147 39 23 chr4 9727781 9727952 -174560710 + AluSx SINE Alu 132 312 0 611 217 22 0 chr4 9727989 9728127 -174560535 - L1ME1 LINE L1 -1 6165 6025 637 241 11 43 chr4 9729199 9729386 -174559276 + MIR SINE MIR 31 211 -51 297 311 85 28 chr4 9729523 9729700 -174558962 + MIR SINE MIR 13 199 -63 330 237 21 54 chr4 9730463 9730556 -174558106 - L2 LINE L2 -27 3245 3156 558 217 45 18 chr4 9731430 9731575 -174557087 - MIR SINE MIR -54 154 33 182 290 16 32 chr4 9731557 9731619 -174557043 - L2 LINE L2 -536 2778 2718 * 222 142 62 7 chr4 9732790 9732854 -174555808 + MIR SINE MIR 108 146 -62 345 263 72 105 chr4 9732894 9733022 -174555640 - L2 LINE L2 -7 3306 3186 877 207 18 62 chr4 9733022 9733249 -174555413 + MER20 DNA MER1_type 1 217 -2 345 263 72 105 chr4 9733249 9733329 -174555333 - L2 LINE L2 -127 3186 3105 316 308 100 15 chr4 9733619 9733749 -174554913 - MIR SINE MIR -70 192 52 371 235 76 34 chr4 9734411 9734530 -174554132 - MIR SINE MIR -99 163 40 182 234 0 21 chr4 9735713 9735760 -174552902 + MIR SINE MIR 37 82 -126 269 306 119 38 chr4 9736692 9736852 -174551810 - L2 LINE L2 -177 3095 2923 1673 170 4 0 chr4 9736992 9737263 -174551399 + AluSq SINE Alu 24 295 -18 252 161 69 11 chr4 9737714 9737801 -174550861 + (CA)n Simple_repeat Simple_repeat 2 93 0 314 107 101 0 chr4 9737814 9737973 -174550689 + (CA)n Simple_repeat Simple_repeat 1 175 0 334 144 67 16 chr4 9738019 9738527 -174550135 + (CA)n Simple_repeat Simple_repeat 1 533 0 282 147 54 92 chr4 9738529 9738713 -174549949 + (CACTA)n Simple_repeat Simple_repeat 3 179 0 * 521 130 65 16 chr4 9738645 9739073 -174549589 + (CA)n Simple_repeat Simple_repeat 1 449 0 220 318 56 19 chr4 9740167 9740274 -174548388 - L2 LINE L2 -2 3270 3160 186 229 0 71 chr4 9740352 9740422 -174548240 + L2 LINE L2 3248 3312 -1 784 118 49 118 chr4 9740593 9740796 -174547866 + MER53 DNA DNA 1 189 0 245 29 29 0 chr4 9741126 9741160 -174547502 + (CA)n Simple_repeat Simple_repeat 2 36 0 339 333 10 0 chr4 9741161 9741263 -174547399 + L2 LINE L2 3165 3267 -5 341 341 24 2 chr4 9742821 9742959 -174545703 + MIR SINE MIR 11 143 -65 196 402 45 0 chr4 9743025 9743137 -174545525 + L2 LINE L2 3181 3297 -16 424 220 10 0 chr4 9743142 9743242 -174545420 + L1MB3 LINE L1 5639 5739 -432 2204 85 10 0 chr4 9743242 9743536 -174545126 + AluSg SINE Alu 1 297 -13 1419 182 18 74 chr4 9743538 9743741 -174544921 + L1MB3 LINE L1 5823 5997 -186 2177 86 0 0 chr4 9743741 9744031 -174544631 - AluSx SINE Alu -22 290 1 1419 182 18 74 chr4 9744031 9744207 -174544455 + L1MB3 LINE L1 5997 6181 -2 202 256 56 44 chr4 9744556 9744646 -174544016 - MIR SINE MIR -159 103 13 2053 200 57 36 chr4 9744741 9745000 -174543662 + MER66B LTR ERV1 1 276 -210 1889 66 91 0 chr4 9745000 9745241 -174543421 + AluSg SINE Alu 1 263 -47 2053 200 57 36 chr4 9745241 9745455 -174543207 + MER66B LTR ERV1 276 484 -2 235 258 117 47 chr4 9745608 9745736 -174542926 - MIR SINE MIR -70 192 56 375 257 110 7 chr4 9746100 9746236 -174542426 - MER31-int LTR ERV1 -1632 3304 3155 2356 98 0 3 chr4 9746241 9746548 -174542114 + AluSx SINE Alu 2 307 -5 512 289 115 24 chr4 9746548 9746801 -174541861 + LTR16C LTR ERVL 108 383 -108 687 247 12 12 chr4 9747005 9747175 -174541487 + LTR16C LTR ERVL 314 483 -8 307 310 39 16 chr4 9747311 9747440 -174541222 - MIR SINE MIR -117 145 14 209 116 0 23 chr4 9747453 9747496 -174541166 + (GGGA)n Simple_repeat Simple_repeat 2 43 0 203 79 26 0 chr4 9748023 9748061 -174540601 + (TTTTTG)n Simple_repeat Simple_repeat 2 40 0 238 121 35 35 chr4 9748080 9748138 -174540524 + GA-rich Low_complexity Low_complexity 1 58 0 300 316 89 73 chr4 9748581 9748897 -174539765 + L3 LINE CR1 1146 1466 -111 525 330 77 27 chr4 9749090 9749351 -174539311 + MLT1L LTR MaLR 101 374 -241 305 234 0 0 chr4 9750377 9750441 -174538221 - MIR SINE MIR -121 141 78 711 154 18 0 chr4 9750828 9750997 -174537665 + (TCCA)n Simple_repeat Simple_repeat 1 172 0 821 143 25 7 chr4 9751012 9751413 -174537249 + (TCCA)n Simple_repeat Simple_repeat 1 408 0 551 191 17 17 chr4 9751434 9751612 -174537050 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 697 151 30 0 chr4 9751627 9751793 -174536869 + (TCCA)n Simple_repeat Simple_repeat 2 172 0 204 349 84 44 chr4 9751939 9752214 -174536448 - L2 LINE L2 -173 3099 2814 246 267 103 42 chr4 9753259 9753377 -174535285 - MIR SINE MIR -59 149 35 377 82 0 87 chr4 9753958 9754142 -174534520 + (CACCT)n Simple_repeat Simple_repeat 3 170 0 1862 143 0 0 chr4 9754236 9754494 -174534168 - AluSx SINE Alu -11 301 44 2200 109 3 0 chr4 9754533 9754860 -174533802 + AluSx SINE Alu 1 328 0 2266 51 44 7 chr4 9754894 9755203 -174533459 + AluY SINE Alu 1 319 0 1804 144 38 17 chr4 9755975 9756266 -174532396 + AluJo SINE Alu 1 297 -15 182 37 37 0 chr4 9756311 9756338 -174532324 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 1702 177 7 7 chr4 9756338 9756637 -174532025 + AluJo SINE Alu 2 300 -12 187 291 70 23 chr4 9756672 9756758 -174531904 + L2 LINE L2 3003 3092 -221 199 303 110 0 chr4 9756850 9757005 -174531657 + L3 LINE CR1 1295 1466 -111 1662 180 68 22 chr4 9757027 9757313 -174531349 - MLT1B LTR MaLR -17 373 66 1024 101 0 150 chr4 9757313 9757540 -174531122 + 7SK RNA RNA 1 193 0 1662 180 68 22 chr4 9757540 9757608 -174531054 - MLT1B LTR MaLR -324 66 3 258 229 73 42 chr4 9757708 9757804 -174530858 + MIR SINE MIR 33 131 -77 243 315 120 0 chr4 9758694 9758802 -174529860 - L2 LINE L2 -8 3264 3144 234 322 51 0 chr4 9759000 9759118 -174529544 - LTR16C LTR ERVL -286 205 82 2305 123 31 14 chr4 9759344 9759702 -174528960 - THE1B LTR MaLR 0 364 1 180 0 0 0 chr4 9759704 9759724 -174528938 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 234 0 0 0 chr4 9760352 9760378 -174528284 + (TTCA)n Simple_repeat Simple_repeat 2 27 0 301 200 124 57 chr4 9760398 9760503 -174528159 - L2 LINE L2 -28 3285 3174 295 345 79 0 chr4 9761376 9761541 -174527121 - MIR SINE MIR -37 225 48 242 73 24 0 chr4 9761735 9761776 -174526886 + (CA)n Simple_repeat Simple_repeat 1 42 0 2175 110 7 3 chr4 9762689 9762981 -174525681 - AluSq SINE Alu -20 293 1 1886 164 0 22 chr4 9762990 9763302 -174525360 - AluJb SINE Alu -7 305 1 2085 85 48 4 chr4 9763506 9763802 -174524860 + AluSq SINE Alu 1 308 0 2300 107 0 0 chr4 9764379 9764670 -174523992 + AluSx SINE Alu 1 291 -21 236 253 87 105 chr4 9764879 9765156 -174523506 - L2 LINE L2 -188 3084 2813 258 132 0 73 chr4 9766192 9766260 -174522402 + (CGGGG)n Simple_repeat Simple_repeat 1 63 0 257 252 27 63 chr4 9766414 9766525 -174522137 - L2 LINE L2 -14 3258 3152 198 272 29 68 chr4 9766492 9766595 -174522067 + MIR3 SINE MIR 58 156 -52 * 2260 126 7 0 chr4 9766843 9767153 -174521509 - AluSx SINE Alu 0 312 1 207 125 0 0 chr4 9767981 9768021 -174520641 + (CCCA)n Simple_repeat Simple_repeat 2 41 0 3904 194 48 20 chr4 9768153 9768342 -174520320 + L1MB7 LINE L1 5004 5186 -998 2072 154 0 6 chr4 9768342 9768654 -174520008 + AluJb SINE Alu 1 310 -2 3904 194 48 20 chr4 9768654 9769124 -174519538 + L1MB7 LINE L1 5186 5641 -543 2395 107 0 0 chr4 9769124 9769434 -174519228 + AluSg SINE Alu 1 310 0 3904 194 48 20 chr4 9769434 9769922 -174518740 + L1MB7 LINE L1 5641 6183 -1 2355 97 7 0 chr4 9769925 9770214 -174518448 - AluSx SINE Alu -21 291 1 2247 107 13 0 chr4 9770222 9770520 -174518142 - AluSq SINE Alu -11 302 1 630 246 75 0 chr4 9770535 9770815 -174517847 + L1M4 LINE L1 3030 3330 -2816 547 231 31 0 chr4 9771294 9771424 -174517238 + MLT1C-int LTR MaLR 1238 1371 0 765 199 65 15 chr4 9771424 9771625 -174517037 + MLT1C LTR MaLR 1 211 -256 2353 175 29 13 chr4 9771653 9772109 -174516553 - MLT1C LTR MaLR 0 467 5 2791 194 9 5 chr4 9772399 9772955 -174515707 - L1MB3 LINE L1 0 6183 5626 231 217 0 0 chr4 9773472 9773532 -174515130 + (CA)n Simple_repeat Simple_repeat 1 60 0 2426 89 3 19 chr4 9774213 9774527 -174514135 - AluSq SINE Alu -4 309 1 308 159 0 43 chr4 9775296 9775365 -174513297 - MLT1F1 LTR MaLR 0 567 502 455 310 108 8 chr4 9775365 9775750 -174512912 - L1MB3 LINE L1 -657 5507 5083 410 119 0 0 chr4 9775752 9775811 -174512851 + AluS SINE Alu 2 60 -251 1411 139 5 14 chr4 9775854 9776069 -174512593 + AluSg/x SINE Alu 66 278 -32 1021 104 6 6 chr4 9776071 9776234 -174512428 + (GAAA)n Simple_repeat Simple_repeat 2 164 0 479 309 14 34 chr4 9776234 9776441 -174512221 - L1MB3 LINE L1 -1059 5087 4885 236 307 61 18 chr4 9776567 9776730 -174511932 + L1MC/D LINE L1 5720 5889 -1919 2382 101 3 0 chr4 9776732 9777040 -174511622 + AluSq SINE Alu 1 309 -4 2156 98 7 18 chr4 9777042 9777376 -174511286 + AluSq SINE Alu 1 331 0 376 255 35 41 chr4 9777761 9777906 -174510756 - L1ME4a LINE L1 -12 6109 5966 3829 80 51 0 chr4 9778053 9778580 -174510082 + MER41A LTR ERV1 1 554 0 267 119 24 0 chr4 9778580 9778622 -174510040 + MER41A-int LTR ERV1 1 43 -5903 1924 111 95 47 chr4 9778665 9779128 -174509534 + MER41A-int LTR ERV1 1 310 -5642 7553 141 202 32 chr4 9779149 9780764 -174507898 + MER41A-int LTR ERV1 129 2017 -3929 334 59 59 0 chr4 9780760 9780811 -174507851 + MER41A-int LTR ERV1 2167 2220 -3726 * 3128 128 55 43 chr4 9780807 9781214 -174507448 + MER41A-int LTR ERV1 3355 3755 -4061 2288 112 0 3 chr4 9781214 9781509 -174507153 + AluSg SINE Alu 1 294 -16 3128 128 55 43 chr4 9781509 9781612 -174507050 + MER41A-int LTR ERV1 3755 3855 -3961 2202 126 7 0 chr4 9781612 9781913 -174506749 + AluSq SINE Alu 1 303 -10 3128 128 55 43 chr4 9781913 9781941 -174506721 + MER41A-int LTR ERV1 3855 3881 -3935 2195 122 0 7 chr4 9781941 9782237 -174506425 + AluSx SINE Alu 1 294 -18 3128 128 55 43 chr4 9782237 9782618 -174506044 + MER41A-int LTR ERV1 3881 4417 -3399 11453 85 32 26 chr4 9782652 9783276 -174505386 + MER41A-int LTR ERV1 4191 4810 -1136 1978 167 0 0 chr4 9783276 9783570 -174505092 + AluSx SINE Alu 1 294 -18 11453 85 32 26 chr4 9783570 9784689 -174503973 + MER41A-int LTR ERV1 4810 5944 -2 3792 85 43 0 chr4 9784689 9785220 -174503442 + MER41A LTR ERV1 1 554 0 948 108 6 78 chr4 9785656 9785823 -174502839 + FRAM SINE Alu 1 40 0 815 223 54 0 chr4 9785848 9786032 -174502630 + MER58A DNA MER1_type 3 196 -28 353 274 152 22 chr4 9786246 9786516 -174502146 + LTR16A LTR ERVL 146 450 0 533 300 15 45 chr4 9786539 9786806 -174501856 - L2 LINE L2 -528 2786 2528 2229 95 3 0 chr4 9786897 9787247 -174501415 + AluSx SINE Alu 1 351 0 1229 214 137 51 chr4 9787457 9787947 -174500715 - LTR55 LTR ERV -16 532 1 371 321 70 12 chr4 9787948 9788291 -174500371 + L1 LINE L1 4288 4650 -1496 261 169 31 31 chr4 9788370 9788435 -174500227 + L1ME LINE L1 5714 5778 -343 860 172 0 0 chr4 9788462 9788596 -174500066 + AluJ SINE Alu 3 136 -176 6529 86 1 2 chr4 9788603 9790412 -174498250 + L1PA10 LINE L1 4352 6168 0 195 184 0 0 chr4 9790480 9790518 -174498144 + A-rich Low_complexity Low_complexity 1 38 0 2035 124 3 23 chr4 9790522 9790828 -174497834 + AluSg SINE Alu 1 300 -10 1996 125 45 14 chr4 9790830 9791117 -174497545 + AluSx SINE Alu 1 296 -16 28 29 0 0 chr4 9791117 9791152 -174497510 + AT_rich Low_complexity Low_complexity 1 35 0 1195 160 0 5 chr4 9791152 9791340 -174497322 + AluJ SINE Alu 117 303 -9 225 302 62 10 chr4 9792765 9792861 -174495801 - MLT1K LTR MaLR -346 242 142 205 196 0 22 chr4 9793089 9793135 -174495527 + (CCA)n Simple_repeat Simple_repeat 1 45 0 210 329 31 12 chr4 9793413 9793574 -174495088 + (CAGGG)n Simple_repeat Simple_repeat 5 168 0 1761 114 144 0 chr4 9794330 9794594 -174494068 + AluSx SINE Alu 1 302 0 1027 242 56 31 chr4 9795102 9795512 -174493150 + MLT1D LTR MaLR 35 493 -12 294 262 58 29 chr4 9795570 9795673 -174492989 + MIR SINE MIR 47 152 -110 977 238 188 18 chr4 9795826 9796225 -174492437 + MLT1J LTR MaLR 13 479 -32 235 219 0 47 chr4 9797563 9797627 -174491035 + MIR SINE MIR 136 196 -66 1234 270 100 37 chr4 9797628 9798110 -174490552 - MLT1E3 LTR MaLR -112 512 1 181 213 21 0 chr4 9798315 9798362 -174490300 + MIR SINE MIR 87 134 -74 2095 74 0 40 chr4 9799111 9799443 -174489219 - AluSx SINE Alu 0 320 1 1939 136 3 3 chr4 9799471 9799779 -174488883 + AluSx SINE Alu 1 308 -4 392 274 83 43 chr4 9799790 9800210 -174488452 - L1MC5 LINE L1 -50 7911 7475 26 64 0 0 chr4 9801340 9801387 -174487275 + GC_rich Low_complexity Low_complexity 1 47 0 279 291 139 10 chr4 9803264 9803495 -174485167 - L1MC5 LINE L1 -421 5821 5674 1899 58 0 19 chr4 9803602 9803861 -174484801 + AluY SINE Alu 45 298 -13 2135 89 3 20 chr4 9804170 9804474 -174484188 - AluSp SINE Alu -5 308 10 809 181 29 23 chr4 9804736 9804907 -174483755 + AluJo SINE Alu 117 288 -24 1532 137 129 0 chr4 9804917 9805180 -174483482 + AluSx SINE Alu 1 297 -15 213 108 0 0 chr4 9805191 9805228 -174483434 + (TAGA)n Simple_repeat Simple_repeat 4 40 0 1762 156 31 0 chr4 9806330 9806619 -174482043 + AluJb SINE Alu 1 298 -14 2276 64 0 17 chr4 9806904 9807199 -174481463 + AluY SINE Alu 1 290 -21 237 33 0 0 chr4 9807200 9807230 -174481432 + (TA)n Simple_repeat Simple_repeat 2 31 0 211 306 124 16 chr4 9807712 9807833 -174480829 - MIR SINE MIR -116 146 13 472 332 142 0 chr4 9807975 9808270 -174480392 + L2 LINE L2 1996 2332 -982 23 0 0 0 chr4 9809618 9809641 -174479021 + AT_rich Low_complexity Low_complexity 1 23 0 334 192 55 0 chr4 9810495 9810568 -174478094 - MER46A DNA MER2_type -1 235 159 1060 167 171 42 chr4 9810568 9810855 -174477807 - MER7A DNA MER2_type -1 345 24 736 160 146 7 chr4 9810870 9811014 -174477648 - MER46A DNA MER2_type -72 164 1 2158 109 0 13 chr4 9811295 9811607 -174477055 + AluSq SINE Alu 1 308 -5 2340 70 0 0 chr4 9811932 9812217 -174476445 - AluSc SINE Alu -22 287 3 24 32 0 0 chr4 9812600 9812631 -174476031 + AT_rich Low_complexity Low_complexity 1 31 0 597 213 107 6 chr4 9812695 9812864 -174475798 - MER5A DNA MER1_type -3 186 1 307 290 32 11 chr4 9815869 9815962 -174472700 - MIR SINE MIR -63 145 51 227 228 101 13 chr4 9817062 9817141 -174471521 + MIR SINE MIR 63 148 -60 2526 52 0 0 chr4 9817829 9818137 -174470525 + AluY SINE Alu 1 308 -3 184 351 77 24 chr4 9818657 9818825 -174469837 - MIR SINE MIR -49 213 37 2061 196 102 35 chr4 9820314 9820371 -174468291 + L1MB3 LINE L1 5564 5616 -567 1850 121 15 0 chr4 9820371 9820636 -174468026 + AluJb SINE Alu 26 294 -18 2061 196 102 35 chr4 9820636 9821156 -174467506 + L1MB3 LINE L1 5616 6180 -3 21 0 0 0 chr4 9821158 9821179 -174467483 + AT_rich Low_complexity Low_complexity 1 21 0 522 241 106 6 chr4 9821216 9821386 -174467276 + MER5A DNA MER1_type 1 187 -2 324 354 73 6 chr4 9823159 9823323 -174465339 + MIR SINE MIR 10 184 -78 188 283 50 17 chr4 9823749 9823809 -174464853 + MER5A DNA MER1_type 128 189 0 199 196 22 43 chr4 9823919 9823965 -174464697 + MIR SINE MIR 2 46 -216 220 304 147 10 chr4 9824074 9824176 -174464486 - L2 LINE L2 -251 3062 2947 191 400 100 5 chr4 9824275 9824495 -174464167 - L2 LINE L2 -604 2710 2470 246 271 42 0 chr4 9825613 9825709 -174462953 + MIR SINE MIR 29 128 -134 231 123 15 77 chr4 9826174 9826304 -174462358 + (CCG)n Simple_repeat Simple_repeat 2 123 0 236 213 25 41 chr4 9826366 9826488 -174462174 + (CCG)n Simple_repeat Simple_repeat 2 121 0 238 320 0 0 chr4 9827279 9827354 -174461308 + G-rich Low_complexity Low_complexity 2 76 0 2331 63 0 16 chr4 9828955 9829258 -174459404 + AluY SINE Alu 1 298 -13 452 105 0 26 chr4 9829729 9829805 -174458857 - Alu SINE Alu -2 308 235 6781 189 16 37 chr4 9829805 9831114 -174457548 + SVA Other Other 104 1385 -1 5535 210 103 41 chr4 9831224 9831702 -174456960 + L1ME1 LINE L1 2093 2540 -4000 1538 187 35 7 chr4 9831702 9831991 -174456671 + AluJo SINE Alu 1 297 -15 5535 210 103 41 chr4 9831991 9833073 -174455589 + L1ME1 LINE L1 2540 3553 -2987 2395 63 0 0 chr4 9833073 9833372 -174455290 - AluY SINE Alu -12 299 1 2073 133 0 0 chr4 9833376 9833677 -174454985 - AluSx SINE Alu -6 306 6 5535 210 103 41 chr4 9833677 9834378 -174454284 + L1ME1 LINE L1 3555 4536 -2004 1840 230 105 14 chr4 9834375 9834944 -174453718 + L1ME1 LINE L1 5922 6542 -18 * 370 254 148 28 chr4 9834981 9835123 -174453539 + L1MC/D LINE L1 5612 5770 -2038 1568 78 207 8 chr4 9835387 9835629 -174453033 - AluSg1 SINE Alu -19 290 1 27 0 0 0 chr4 9835629 9835656 -174453006 + AT_rich Low_complexity Low_complexity 1 27 0 252 362 0 29 chr4 9836500 9836605 -174452057 + MIR SINE MIR 29 130 -132 551 280 176 3 chr4 9837422 9837758 -174450904 - L1MC4 LINE L1 -89 7953 7560 947 187 101 86 chr4 9837760 9838177 -174450485 - LTR37B LTR ERV1 -45 423 1 978 256 140 47 chr4 9838243 9838836 -174449826 - L1ME1 LINE L1 -9 6157 5466 21 0 0 0 chr4 9839564 9839585 -174449077 + GC_rich Low_complexity Low_complexity 1 21 0 822 155 99 6 chr4 9841240 9841401 -174447261 - FRAM SINE Alu -1 175 1 2185 95 14 0 chr4 9842528 9842823 -174445839 + AluSx SINE Alu 1 299 -13 350 233 33 42 chr4 9844514 9844634 -174444028 - MIR SINE MIR -116 146 28 367 259 123 0 chr4 9844732 9844872 -174443790 + MIR SINE MIR 58 216 -46 2230 111 0 0 chr4 9846089 9846377 -174442285 + AluSx SINE Alu 1 288 -24 2101 101 6 54 chr4 9846928 9847244 -174441418 + AluSq SINE Alu 1 301 -12 2269 108 0 7 chr4 9847866 9848171 -174440491 - AluSc SINE Alu -6 303 1 2397 56 3 3 chr4 9848200 9848484 -174440178 - AluY SINE Alu -16 295 12 1629 60 0 0 chr4 9848920 9849137 -174439525 + GSAT Satellite centromeric 1 217 0 754 123 13 175 chr4 9849372 9849600 -174439062 + 7SK RNA RNA 1 191 -2 2370 90 3 0 chr4 9849704 9850003 -174438659 + AluSx SINE Alu 1 300 -12 1784 159 68 3 chr4 9850011 9850364 -174438298 + L1MB3 LINE L1 5775 6150 -33 2196 108 31 0 chr4 9850448 9850736 -174437926 + AluSg SINE Alu 1 297 -13 429 273 46 41 chr4 9850749 9850892 -174437770 + L1ME3A LINE L1 5959 6105 -65 2346 110 0 0 chr4 9850892 9851200 -174437462 - AluSx SINE Alu -4 308 1 429 273 46 41 chr4 9851200 9851250 -174437412 + L1ME3A LINE L1 6105 6153 -17 216 290 195 6 chr4 9851681 9851850 -174436812 + L2 LINE L2 2558 2758 -556 192 355 11 32 chr4 9852001 9852094 -174436568 + L2 LINE L2 2928 3018 -254 360 278 102 24 chr4 9852678 9852883 -174435779 - MIR SINE MIR -34 228 8 202 275 110 28 chr4 9853363 9853472 -174435190 + L2 LINE L2 3150 3267 -5 197 318 136 45 chr4 9855176 9855374 -174433288 - MIR SINE MIR -26 236 21 1907 146 3 23 chr4 9856082 9856384 -174432278 + AluSx SINE Alu 4 299 -13 2308 111 0 13 chr4 9857478 9857614 -174431048 + AluSx SINE Alu 1 137 -175 2246 112 0 3 chr4 9857614 9857910 -174430752 + AluSg SINE Alu 1 295 -15 2308 111 0 13 chr4 9857910 9858080 -174430582 + AluSx SINE Alu 137 303 -9 691 191 37 0 chr4 9858419 9858555 -174430107 + FLAM_C SINE Alu 2 142 -1 207 0 0 0 chr4 9858637 9858660 -174430002 + (TG)n Simple_repeat Simple_repeat 2 24 0 232 269 147 9 chr4 9860339 9860455 -174428207 + MIR SINE MIR 45 177 -69 2423 80 7 0 chr4 9860775 9861076 -174427586 - AluSq SINE Alu -10 303 1 351 270 81 9 chr4 9863754 9863865 -174424797 - MIR SINE MIR -72 136 18 262 0 53 0 chr4 9863901 9863939 -174424723 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 2038 125 0 4 chr4 9863944 9864223 -174424439 - AluSx SINE Alu -34 278 1 2403 53 13 20 chr4 9864384 9864686 -174423976 + AluY SINE Alu 1 300 -11 466 304 67 17 chr4 9864706 9864946 -174423716 + L1ME LINE L1 5532 5783 -338 25 31 0 0 chr4 9865329 9865361 -174423301 + AT_rich Low_complexity Low_complexity 1 32 0 524 282 73 10 chr4 9865514 9865720 -174422942 - MER20 DNA MER1_type 0 219 1 2612 40 0 20 chr4 9866109 9866413 -174422249 - AluY SINE Alu -13 298 1 332 330 51 25 chr4 9866508 9866705 -174421957 + MIR SINE MIR 59 260 -2 419 282 38 72 chr4 9868928 9869190 -174419472 + MER112 DNA MER1_type 2 254 -2 352 318 0 80 chr4 9869339 9869383 -174419279 - MIR3 SINE MIR -50 158 112 2222 124 3 0 chr4 9869383 9869689 -174418973 + AluSx SINE Alu 1 307 -5 352 318 0 80 chr4 9869689 9869795 -174418867 - MIR3 SINE MIR -96 112 20 2226 100 7 0 chr4 9871383 9871684 -174416978 - AluY SINE Alu -8 303 1 925 155 20 0 chr4 9873158 9873341 -174415321 - AluSg/x SINE Alu 0 318 133 263 326 10 10 chr4 9873341 9873439 -174415223 + MIR SINE MIR 109 206 -56 1905 182 3 0 chr4 9873788 9874090 -174414572 + AluJb SINE Alu 1 303 -9 27 73 0 0 chr4 9874131 9874186 -174414476 + AT_rich Low_complexity Low_complexity 1 55 0 2351 104 0 10 chr4 9875445 9875754 -174412908 + AluSg1 SINE Alu 1 306 -3 397 199 202 12 chr4 9878485 9878609 -174410053 - AluJb SINE Alu -8 294 174 660 256 105 77 chr4 9878627 9879085 -174409577 - L1MC5 LINE L1 -30 7931 7487 2133 158 0 0 chr4 9879085 9879395 -174409267 + AluJb SINE Alu 1 310 -2 2182 114 0 14 chr4 9879401 9879698 -174408964 + AluSg SINE Alu 1 293 -17 660 256 105 77 chr4 9879698 9879728 -174408934 - L1MC5 LINE L1 -478 7483 7422 494 218 17 28 chr4 9879768 9880387 -174408275 + (CA)n Simple_repeat Simple_repeat 1 612 0 266 190 16 38 chr4 9880479 9880663 -174407999 + (CA)n Simple_repeat Simple_repeat 1 180 0 2500 79 0 3 chr4 9880893 9881196 -174407466 - AluSg SINE Alu -8 302 1 1820 184 0 9 chr4 9881296 9881611 -174407051 - AluJb SINE Alu 0 312 1 2042 116 46 0 chr4 9882029 9882313 -174406349 + AluSg SINE Alu 1 297 -13 1981 104 42 21 chr4 9886412 9886699 -174401963 + AluSc SINE Alu 1 293 -16 310 330 69 12 chr4 9887794 9887967 -174400695 + MIR SINE MIR 16 198 -64 322 288 117 0 chr4 9888229 9888340 -174400322 - MIR3 SINE MIR -52 156 33 2445 93 0 0 chr4 9888480 9888780 -174399882 + AluSx SINE Alu 1 300 -12 2437 78 0 10 chr4 9889181 9889477 -174399185 + AluSg SINE Alu 1 293 -17 191 275 0 0 chr4 9889928 9889968 -174398694 + L2 LINE L2 3262 3301 -12 314 280 110 8 chr4 9890000 9890118 -174398544 - L2 LINE L2 0 3272 3143 1586 185 10 27 chr4 9890850 9891142 -174397520 - AluJb SINE Alu -25 287 1 2415 73 0 16 chr4 9891277 9891590 -174397072 + AluSg SINE Alu 1 308 -2 2119 79 0 18 chr4 9892061 9892338 -174396324 - AluY SINE Alu -13 298 27 302 388 91 19 chr4 9893234 9893597 -174395065 + L1MEd LINE L1 802 1190 -4929 831 75 0 0 chr4 9893610 9893730 -174394932 + (TCCA)n Simple_repeat Simple_repeat 1 120 0 382 287 16 25 chr4 9893730 9893852 -174394810 - L2 LINE L2 -13 3300 3180 372 248 90 8 chr4 9894713 9894846 -174393816 + MLT1J2 LTR MaLR 67 210 -240 404 211 22 0 chr4 9894938 9895028 -174393634 + MLT1I LTR MaLR 317 408 -1 231 342 40 20 chr4 9895209 9895358 -174393304 + L2 LINE L2 2636 2787 -527 241 250 65 9 chr4 9895619 9895727 -174392935 + MER103 DNA DNA 6 119 -47 189 238 0 0 chr4 9895814 9895856 -174392806 - MIR SINE MIR -55 153 112 477 264 48 0 chr4 9896178 9896303 -174392359 - MIR SINE MIR -36 226 96 963 213 54 77 chr4 9896468 9896778 -174391884 + MLT1A1 LTR MaLR 1 304 -61 1664 171 0 49 chr4 9896778 9897083 -174391579 - AluJb SINE Alu -22 290 1 963 213 54 77 chr4 9897083 9897125 -174391537 + MLT1A1 LTR MaLR 304 345 -20 436 306 19 32 chr4 9897672 9897829 -174390833 + MIR SINE MIR 9 163 -99 236 360 56 8 chr4 9897940 9898065 -174390597 + L2 LINE L2 3103 3233 -39 613 219 27 27 chr4 9898400 9898546 -174390116 + L2 LINE L2 3167 3312 -1 427 282 63 14 chr4 9899495 9899637 -174389025 - MER5B DNA MER1_type -16 162 14 566 208 101 0 chr4 9899658 9899807 -174388855 - MER5A DNA MER1_type 0 189 26 193 331 39 47 chr4 9899786 9899913 -174388749 - MIR SINE MIR -96 166 41 * 410 288 88 12 chr4 9899890 9900060 -174388602 + MIR SINE MIR 80 262 0 180 367 60 60 chr4 9900096 9900295 -174388367 + L2 LINE L2 3032 3230 -42 337 280 150 24 chr4 9900768 9900975 -174387687 + L2 LINE L2 2553 2785 -529 264 308 98 49 chr4 9900972 9901258 -174387404 + L2 LINE L2 2921 3220 -52 * 457 309 53 0 chr4 9901665 9901817 -174386845 + MIR SINE MIR 30 189 -73 553 172 15 20 chr4 9901926 9902318 -174386344 + CT-rich Low_complexity Low_complexity 1 390 0 1177 188 64 38 chr4 9902318 9902584 -174386078 - AluJb SINE Alu -39 273 1 267 278 121 52 chr4 9902640 9902813 -174385849 - MIR3 SINE MIR -20 188 4 23 92 0 0 chr4 9904122 9904187 -174384475 + GC_rich Low_complexity Low_complexity 1 65 0 27 85 0 11 chr4 9904365 9904434 -174384228 + GC_rich Low_complexity Low_complexity 1 70 -23 198 71 0 0 chr4 9904434 9904462 -174384200 + (CTG)n Simple_repeat Simple_repeat 1 28 0 27 85 0 11 chr4 9904462 9904486 -174384176 + GC_rich Low_complexity Low_complexity 70 93 0 198 0 0 0 chr4 9906858 9906880 -174381782 + (TG)n Simple_repeat Simple_repeat 2 23 0 292 74 0 37 chr4 9908284 9908338 -174380324 + (TCCCC)n Simple_repeat Simple_repeat 2 53 0 2375 158 21 8 chr4 9908659 9909044 -174379618 - MLT1B LTR MaLR 0 390 1 240 296 83 15 chr4 9909184 9909316 -174379346 - L2 LINE L2 -213 3059 2919 714 319 32 0 chr4 9909486 9909702 -174378960 + MIR SINE MIR 28 250 -12 214 360 45 0 chr4 9911769 9911880 -174376782 + L3 LINE CR1 1415 1530 -47 352 250 11 22 chr4 9912124 9912216 -174376446 + MIR3 SINE MIR 109 199 -9 247 247 49 23 chr4 9912352 9912466 -174376196 + MIR SINE MIR 41 153 -62 330 301 204 28 chr4 9912642 9912961 -174375701 - L2 LINE L2 -20 3252 2878 491 377 20 16 chr4 9914575 9914819 -174373843 - MIR SINE MIR 0 262 18 1990 121 28 0 chr4 9914832 9915114 -174373548 + AluSx SINE Alu 1 290 -22 633 99 0 0 chr4 9915128 9915209 -174373453 + AluSg/x SINE Alu 210 290 -22 633 99 0 0 chr4 9915223 9915304 -174373358 + AluSg/x SINE Alu 210 290 -22 3163 176 15 19 chr4 9915324 9915902 -174372760 - L1MB3 LINE L1 0 6183 5606 1857 164 0 7 chr4 9915902 9916200 -174372462 - AluJo SINE Alu -16 296 1 3163 176 15 19 chr4 9916200 9916216 -174372446 - L1MB3 LINE L1 -577 5606 5591 434 218 32 51 chr4 9916955 9917111 -174371551 - Charlie4 DNA MER1_type 0 1961 1809 893 234 40 4 chr4 9917143 9917395 -174371267 - Charlie4 DNA MER1_type -1667 294 34 2258 96 0 10 chr4 9917443 9917757 -174370905 + AluSx SINE Alu 1 311 -1 320 239 103 60 chr4 9917899 9918016 -174370646 + L2 LINE L2 3175 3296 -17 222 37 0 0 chr4 9918511 9918538 -174370124 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 235 321 12 0 chr4 9920122 9920203 -174368459 - L2 LINE L2 -1 3271 3190 216 0 0 0 chr4 9920318 9920342 -174368320 + (GCTTG)n Simple_repeat Simple_repeat 3 26 0 185 400 94 12 chr4 9920713 9920883 -174367779 + MIR SINE MIR 60 243 -19 1677 166 11 0 chr4 9921984 9922261 -174366401 - AluJo SINE Alu -30 282 3 191 310 186 21 chr4 9922323 9922468 -174366194 + MIR SINE MIR 57 225 -37 207 69 0 0 chr4 9922896 9922925 -174365737 + (GGGA)n Simple_repeat Simple_repeat 2 30 0 1980 109 60 0 chr4 9923067 9923351 -174365311 - AluSx SINE Alu -11 301 1 867 200 23 36 chr4 9924045 9924265 -174364397 - MLT1K LTR MaLR 0 588 372 361 269 31 8 chr4 9924335 9924465 -174364197 - MLT1K LTR MaLR -331 257 125 412 260 32 8 chr4 9925331 9925454 -174363208 - MIR SINE MIR -63 145 20 1664 207 102 8 chr4 9925843 9926205 -174362457 + MSTD LTR MaLR 1 396 0 250 333 0 0 chr4 9926329 9926398 -174362264 - L3 LINE CR1 -101 1476 1408 4400 127 44 83 chr4 9926617 9927632 -174361030 + pTR5 LTR ERV1 729 2025 -413 364 235 10 0 chr4 9927632 9927730 -174360932 + LTR30 LTR ERV1 544 642 -80 1229 98 57 0 chr4 9927731 9927925 -174360737 + LTR12 LTR ERV1 377 581 -133 1860 214 110 2 chr4 9928071 9928524 -174360138 - MLT1D LTR MaLR 0 505 4 331 264 104 57 chr4 9930558 9930770 -174357892 + L2 LINE L2 2747 2968 -346 270 300 25 0 chr4 9931048 9931128 -174357534 - MER5B DNA MER1_type -43 135 54 2568 90 33 11 chr4 9931147 9931514 -174357148 - THE1C LTR MaLR 0 375 1 219 315 41 68 chr4 9932944 9933090 -174355572 - MER5A DNA MER1_type -1 188 47 * 232 287 52 73 chr4 9932966 9933102 -174355560 + MER5A DNA MER1_type 35 167 -22 392 323 138 4 chr4 9933303 9933535 -174355127 - L2 LINE L2 -9 3263 3001 413 300 45 35 chr4 9933536 9933736 -174354926 - L2 LINE L2 -4 3309 3108 1478 246 130 6 chr4 9933847 9934354 -174354308 + L1MB8 LINE L1 5603 6172 -6 490 367 72 30 chr4 9934989 9935017 -174353645 - L1ME4a LINE L1 -196 5925 5900 237 33 0 0 chr4 9935017 9935047 -174353615 + (CA)n Simple_repeat Simple_repeat 1 30 0 490 367 72 30 chr4 9935047 9935323 -174353339 - L1ME4a LINE L1 -221 5900 5608 231 297 148 16 chr4 9935543 9935671 -174352991 + MIR SINE MIR 28 172 -90 871 135 135 6 chr4 9936257 9936435 -174352227 - MSTA LTR MaLR -227 201 1 257 333 0 0 chr4 9936758 9936842 -174351820 + L2 LINE L2 2987 3070 -202 289 304 72 16 chr4 9936975 9937100 -174351562 + L2 LINE L2 3134 3265 -7 638 304 65 0 chr4 9937496 9937743 -174350919 - MLT1G LTR MaLR -316 274 12 318 292 205 11 chr4 9937868 9938053 -174350609 - MIR SINE MIR -8 254 34 1335 196 108 25 chr4 9939740 9940093 -174348569 - MLT1B LTR MaLR -8 382 1 307 130 0 14 chr4 9942571 9942632 -174346030 - MLT2D LTR ERVL 0 414 367 1262 205 28 75 chr4 9942701 9943103 -174345559 - MLT2D LTR ERVL -40 480 1 390 91 0 0 chr4 9943151 9943206 -174345456 + (TCCA)n Simple_repeat Simple_repeat 4 58 0 195 260 20 0 chr4 9943209 9943259 -174345403 - L2 LINE L2 -1 3312 3262 206 297 55 61 chr4 9943316 9943481 -174345181 - L2 LINE L2 -162 3110 2947 349 339 60 12 chr4 9945348 9945516 -174343146 + MIR SINE MIR 36 211 -51 247 176 20 0 chr4 9945534 9945585 -174343077 + MIR3 SINE MIR 105 156 -52 209 273 0 0 chr4 9946349 9946393 -174342269 + L2 LINE L2 3215 3258 -14 398 308 0 0 chr4 9946979 9947086 -174341576 - MIR SINE MIR -75 187 81 266 222 86 37 chr4 9947611 9947692 -174340970 - L2 LINE L2 -49 3264 3180 579 284 72 18 chr4 9947777 9948111 -174340551 - L2 LINE L2 -143 3170 2819 2156 121 3 0 chr4 9948216 9948522 -174340140 - AluSx SINE Alu -5 307 1 228 67 0 0 chr4 9949169 9949199 -174339463 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 285 196 0 0 chr4 9949312 9949363 -174339299 + MIR SINE MIR 104 154 -108 192 231 0 0 chr4 9950187 9950239 -174338423 + (TG)n Simple_repeat Simple_repeat 1 52 0 206 301 43 21 chr4 9951689 9951782 -174336880 + MIR SINE MIR 45 139 -69 341 148 0 0 chr4 9952508 9952569 -174336093 - MER53 DNA DNA -2 187 127 2126 85 0 14 chr4 9952569 9952870 -174335792 - AluSq SINE Alu 0 307 11 257 303 28 56 chr4 9953141 9953283 -174335379 - L2 LINE L2 -18 3295 3158 1640 164 20 30 chr4 9953839 9954138 -174334524 - AluJo SINE Alu -10 302 7 656 252 86 13 chr4 9955018 9955434 -174333228 - MER68 LTR ERV1 -9 553 72 413 294 94 25 chr4 9957104 9957264 -174331398 + MIR SINE MIR 20 190 -72 326 247 27 0 chr4 9957481 9957554 -174331108 - MIR SINE MIR -56 152 78 477 242 61 15 chr4 9960094 9960226 -174328436 + MIR SINE MIR 77 214 -48 241 298 70 9 chr4 9960271 9960385 -174328277 + MIR3 SINE MIR 83 203 -5 869 231 141 27 chr4 9960725 9961241 -174327421 - MLT1G LTR MaLR 0 577 19 532 291 51 15 chr4 9961258 9961454 -174327208 - MIR SINE MIR -12 250 48 2033 121 0 3 chr4 9961663 9961981 -174326681 + AluSx SINE Alu 1 317 0 368 296 38 8 chr4 9962670 9962802 -174325860 + MIR3 SINE MIR 22 157 -51 476 283 0 50 chr4 9962807 9962987 -174325675 - MLT1K LTR MaLR -16 572 402 264 342 51 25 chr4 9963214 9963372 -174325290 + MIR SINE MIR 5 166 -96 273 284 32 65 chr4 9963375 9963530 -174325132 - MLT1J LTR MaLR -231 280 131 310 247 26 13 chr4 9964161 9964238 -174324424 + L1ME4a LINE L1 6044 6121 0 310 281 9 53 chr4 9964340 9964454 -174324208 + MER94 DNA DNA 3 111 -23 3412 175 27 2 chr4 9965619 9966371 -174322291 + L1PB4 LINE L1 5381 6164 -2 219 366 59 0 chr4 9966434 9966535 -174322127 + MIR SINE MIR 75 181 -81 185 229 213 0 chr4 9966590 9966651 -174322011 - MER5A DNA MER1_type -84 105 32 249 257 0 0 chr4 9966713 9966783 -174321879 + (TG)n Simple_repeat Simple_repeat 1 70 0 316 278 201 16 chr4 9966843 9967037 -174321625 - L2 LINE L2 -42 3230 3001 2237 86 7 0 chr4 9967894 9968184 -174320478 - AluSg SINE Alu -13 297 6 293 209 118 18 chr4 9968185 9968295 -174320367 + MER113 DNA MER1_type? 99 219 -302 182 146 98 24 chr4 9968572 9968613 -174320049 - L3 LINE CR1 -127 1450 1407 254 324 152 7 chr4 9969273 9969418 -174319244 + MIR SINE MIR 17 182 -80 212 362 98 6 chr4 9969559 9969733 -174318929 - L3 LINE CR1 -196 1381 1192 2359 111 43 25 chr4 9970310 9970678 -174317984 + THE1C LTR MaLR 1 375 0 363 356 132 24 chr4 9971692 9971942 -174316720 + L1ME4a LINE L1 5687 5963 -158 315 272 60 54 chr4 9972291 9972390 -174316272 + L1ME4a LINE L1 5936 6038 -83 2229 114 0 0 chr4 9972390 9972697 -174315965 - AluSx SINE Alu -5 307 1 315 272 60 54 chr4 9972697 9972781 -174315881 + L1ME4a LINE L1 6038 6120 -1 365 258 138 13 chr4 9972976 9973135 -174315527 - MIR SINE MIR -31 231 53 1119 243 57 33 chr4 9974744 9974790 -174313872 + L1M4 LINE L1 4895 4938 -1208 774 32 0 0 chr4 9974790 9974883 -174313779 + (GAAA)n Simple_repeat Simple_repeat 3 95 0 1119 243 57 33 chr4 9974883 9975200 -174313462 + L1M4 LINE L1 4938 5246 -900 2254 102 3 13 chr4 9975200 9975514 -174313148 + AluSx SINE Alu 1 311 -1 180 0 0 0 chr4 9975516 9975536 -174313126 + (TA)n Simple_repeat Simple_repeat 1 20 0 1119 243 57 33 chr4 9975536 9975625 -174313037 + L1M4 LINE L1 5246 5362 -784 200 360 27 36 chr4 9975991 9976102 -174312560 + MIR SINE MIR 35 144 -118 282 301 109 65 chr4 9976775 9977177 -174311485 + L2 LINE L2 2810 3229 -43 216 192 19 39 chr4 9977273 9977325 -174311337 - L2 LINE L2 -14 3258 3208 250 286 134 9 chr4 9977575 9977687 -174310975 - MER96 DNA MER1_type? -39 136 11 189 299 41 62 chr4 9978222 9978319 -174310343 + MIR3 SINE MIR 88 182 -26 316 309 158 29 chr4 9978791 9978993 -174309669 - MIR SINE MIR -43 219 3 196 231 0 0 chr4 9979687 9979726 -174308936 + L2 LINE L2 3263 3301 -12 222 362 51 22 chr4 9979834 9979972 -174308690 + MIR3 SINE MIR 5 146 -62 334 220 66 0 chr4 9980043 9980134 -174308528 + MER5A DNA MER1_type 10 106 -83 187 267 287 0 chr4 9980068 9980169 -174308493 - MER5A DNA MER1_type -24 165 36 * 190 332 72 9 chr4 9980574 9980797 -174307865 + L2 LINE L2 2738 2974 -340 211 336 60 0 chr4 9980834 9980950 -174307712 + L2 LINE L2 3141 3263 -9 182 331 83 53 chr4 9980979 9981148 -174307514 + MIR SINE MIR 45 218 -44 1583 202 80 36 chr4 9981456 9981871 -174306791 + MLT1D LTR MaLR 1 433 -72 532 216 16 0 chr4 9981876 9982001 -174306661 - MER47A DNA MER2_type 0 366 240 530 232 0 0 chr4 9982002 9982114 -174306548 - MER47A DNA MER2_type -254 112 1 351 203 0 0 chr4 9982114 9982183 -174306479 + MLT1D LTR MaLR 437 505 0 417 290 36 67 chr4 9983318 9983475 -174305187 + MIR SINE MIR 45 208 -54 2120 114 0 31 chr4 9983475 9983792 -174304870 + AluSx SINE Alu 1 307 -5 417 290 36 67 chr4 9983792 9983828 -174304834 + MIR SINE MIR 208 244 -18 743 263 91 45 chr4 9984299 9984695 -174303967 + MLT1C LTR MaLR 54 467 0 220 246 87 43 chr4 9985702 9985840 -174302822 + L2 LINE L2 2921 3064 -208 205 378 64 13 chr4 9986050 9986206 -174302456 - L3 LINE CR1 -7 1570 1407 254 284 28 57 chr4 9986632 9986773 -174301889 - MIR SINE MIR -90 172 36 944 135 12 0 chr4 9986884 9987054 -174301608 + (TTCA)n Simple_repeat Simple_repeat 2 173 0 321 274 186 0 chr4 9987065 9987167 -174301495 - L2 LINE L2 -15 3257 3137 220 271 82 16 chr4 9987240 9987362 -174301300 - L2 LINE L2 -1469 1845 1716 * 233 241 0 0 chr4 9987356 9987410 -174301252 + L2 LINE L2 3218 3271 -1 201 262 153 38 chr4 9987704 9987887 -174300775 - L2 LINE L2 -411 2903 2700 372 324 33 2 chr4 9988221 9988426 -174300236 + MIR3 SINE MIR 1 259 -3 308 280 136 8 chr4 9988555 9988680 -174299982 - MIR3 SINE MIR -32 176 36 730 254 149 11 chr4 9988686 9988961 -174299701 - MLT1C LTR MaLR -21 446 134 2289 95 0 0 chr4 9988995 9989291 -174299371 - AluSq SINE Alu -17 296 1 337 273 97 48 chr4 9990513 9990678 -174297984 - MIR3 SINE MIR -22 186 14 575 232 53 0 chr4 9992333 9992484 -174296178 - MLT1B LTR MaLR 0 390 232 235 200 0 0 chr4 9992504 9992549 -174296113 + G-rich Low_complexity Low_complexity 1 45 0 206 23 93 0 chr4 9992550 9992593 -174296069 + GA-rich Low_complexity Low_complexity 2 48 0 483 226 82 7 chr4 9992594 9992740 -174295922 - MLT1B LTR MaLR -205 185 29 196 178 22 0 chr4 9992823 9992868 -174295794 + L2 LINE L2 3014 3059 -213 391 296 254 0 chr4 9993162 9993442 -174295220 + L2 LINE L2 2912 3262 -10 188 268 36 0 chr4 9993455 9993511 -174295151 + L2 LINE L2 3207 3264 -8 289 357 56 16 chr4 9994492 9994618 -174294044 - MIR3 SINE MIR -63 145 15 210 310 17 0 chr4 9994626 9994684 -174293978 + (TG)n Simple_repeat Simple_repeat 2 60 0 237 33 0 0 chr4 9994749 9994779 -174293883 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 323 328 156 25 chr4 9994791 9995283 -174293379 - L2 LINE L2 -25 3247 2682 183 325 12 62 chr4 9995748 9995828 -174292834 - MIR SINE MIR -123 139 64 2418 66 0 3 chr4 9996980 9997281 -174291381 + AluY SINE Alu 1 300 -11 386 139 14 0 chr4 9998601 9998673 -174289989 + CT-rich Low_complexity Low_complexity 3 75 0 1352 198 38 108 chr4 9998818 9999318 -174289344 + MLT1C LTR MaLR 1 465 -2 2050 126 0 3 chr4 9999336 9999630 -174289032 - AluSx SINE Alu -15 297 5 880 317 110 23 chr4 10000564 10001195 -174287467 + L2 LINE L2 2613 3310 -3 308 250 0 33 chr4 10001812 10001904 -174286758 - HsTC2 DNA Tc2 -1809 89 1 2634 141 62 2 chr4 10003773 10004176 -174284486 - MSTA LTR MaLR 0 428 2 180 336 96 0 chr4 10006475 10006579 -174282083 + L2 LINE L2 2982 3095 -177 391 275 64 0 chr4 10007459 10007568 -174281094 - MIR SINE MIR -100 162 47 789 185 13 0 chr4 10010026 10010183 -174278479 - L1MC/D LINE L1 -699 5634 5476 320 319 21 42 chr4 10010183 10010261 -174278401 + MIR SINE MIR 118 193 -69 192 40 0 0 chr4 10010261 10010286 -174278376 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 320 319 21 42 chr4 10010286 10010351 -174278311 + MIR SINE MIR 193 258 -4 310 331 128 12 chr4 10012505 10012677 -174275985 + MIR SINE MIR 25 216 -46 196 275 12 62 chr4 10012801 10012881 -174275781 - MIR3 SINE MIR -6 202 127 377 258 129 12 chr4 10013062 10013225 -174275437 - L2 LINE L2 -257 3056 2875 931 71 20 45 chr4 10013735 10014058 -174274604 + (TGGA)n Simple_repeat Simple_repeat 1 315 0 297 51 0 0 chr4 10014070 10014109 -174274553 + (TGGA)n Simple_repeat Simple_repeat 1 39 0 224 297 203 7 chr4 10014153 10014291 -174274371 - MIR3 SINE MIR -41 167 3 22 56 0 0 chr4 10014356 10014392 -174274270 + AT_rich Low_complexity Low_complexity 1 36 0 1410 189 79 16 chr4 10015059 10015425 -174273237 - MLT1C LTR MaLR -76 391 3 214 316 13 13 chr4 10015609 10015688 -174272974 - MIR SINE MIR -117 145 67 332 298 0 10 chr4 10015785 10015889 -174272773 - MIR SINE MIR -61 147 45 283 241 60 0 chr4 10015985 10016068 -174272594 + MER81 DNA DNA 27 114 0 372 298 128 30 chr4 10016901 10017136 -174271526 + L2 LINE L2 2906 3163 -109 2261 206 27 2 chr4 10017354 10017792 -174270870 - L1MB5 LINE L1 -8 6166 5718 190 227 68 0 chr4 10017817 10017861 -174270801 - L2 LINE L2 -23 3290 3244 238 264 35 0 chr4 10017962 10018049 -174270613 + MER45 DNA AcHobo 26 115 -1466 309 357 8 16 chr4 10018946 10019075 -174269587 + MIR SINE MIR 17 144 -118 316 248 204 0 chr4 10019229 10019342 -174269320 + MIR SINE MIR 8 143 -119 180 359 39 10 chr4 10021023 10021126 -174267536 - MIR3 SINE MIR -6 202 97 194 283 19 0 chr4 10021244 10021297 -174267365 + MIR SINE MIR 90 143 -65 3144 222 34 4 chr4 10021601 10022426 -174266236 - L1M4 LINE L1 -2885 3261 2412 303 311 0 49 chr4 10022555 10022677 -174265985 + L2 LINE L2 3197 3312 -1 26 30 0 0 chr4 10022696 10022729 -174265933 + AT_rich Low_complexity Low_complexity 1 33 0 604 304 68 27 chr4 10023068 10023288 -174265374 - MIR SINE MIR -21 241 13 461 296 39 82 chr4 10023988 10024194 -174264468 - MIR SINE MIR 0 262 66 2168 113 0 3 chr4 10024200 10024510 -174264152 - AluSq SINE Alu -4 309 1 204 178 0 44 chr4 10027287 10027332 -174261330 + CT-rich Low_complexity Low_complexity 3 45 0 623 225 21 0 chr4 10027333 10027613 -174261049 + (TCCA)n Simple_repeat Simple_repeat 1 285 0 208 231 26 0 chr4 10027632 10027710 -174260952 + (TCCA)n Simple_repeat Simple_repeat 1 80 0 314 279 81 62 chr4 10027823 10027984 -174260678 + L2 LINE L2 3109 3272 0 274 303 107 0 chr4 10027990 10028112 -174260550 - MIR3 SINE MIR -45 163 29 201 265 118 0 chr4 10028598 10028666 -174259996 - MIR3 SINE MIR -41 167 92 238 273 0 0 chr4 10029163 10029218 -174259444 + L2 LINE L2 3208 3262 -10 215 299 51 26 chr4 10030118 10030235 -174258427 + MIR SINE MIR 17 136 -72 186 43 0 0 chr4 10030355 10030378 -174258284 + (GA)n Simple_repeat Simple_repeat 1 23 0 544 278 44 15 chr4 10031034 10031239 -174257423 - MLT1J2 LTR MaLR 0 450 240 553 280 113 27 chr4 10031604 10031933 -174256729 + L2 LINE L2 2828 3184 -129 1103 193 44 139 chr4 10031944 10032353 -174256309 - MLT1A2 LTR MaLR -4 370 1 347 287 130 0 chr4 10032366 10032474 -174256188 + L2 LINE L2 3191 3312 -1 397 278 98 40 chr4 10033904 10034077 -174254585 - MIR SINE MIR -12 250 68 318 257 119 9 chr4 10034354 10034463 -174254199 - L1M4 LINE L1 -3353 2793 2673 1552 204 40 3 chr4 10034486 10034678 -174253984 - AluJo SINE Alu -2 310 102 2030 134 23 7 chr4 10034678 10034985 -174253677 + AluSx SINE Alu 1 312 0 1552 204 40 3 chr4 10034985 10035091 -174253571 - AluJo SINE Alu -210 102 1 504 328 25 20 chr4 10035794 10036056 -174252606 - MIR SINE MIR 0 262 2 2035 105 0 20 chr4 10036226 10036520 -174252142 - AluJb SINE Alu -2 310 23 394 220 0 36 chr4 10037058 10037226 -174251436 + CT-rich Low_complexity Low_complexity 1 162 0 294 377 16 0 chr4 10038583 10038705 -174249957 + MIR SINE MIR 75 198 -64 205 313 47 0 chr4 10039679 10039743 -174248919 + L3 LINE CR1 1263 1329 -248 771 281 51 23 chr4 10039823 10040218 -174248444 + MER115 DNA AcHobo 29 434 -259 529 279 8 0 chr4 10042525 10042654 -174246008 - MIR SINE MIR -39 223 94 517 273 16 0 chr4 10043195 10043323 -174245339 - L2 LINE L2 -1 3271 3142 247 79 26 0 chr4 10044318 10044356 -174244306 + L2 LINE L2 2745 2783 -531 964 281 72 36 chr4 10044366 10044757 -174243905 + L2 LINE L2 2887 3291 -22 270 116 0 0 chr4 10044759 10044802 -174243860 + (TG)n Simple_repeat Simple_repeat 2 44 0 304 295 76 19 chr4 10045921 10046026 -174242636 - MIR SINE MIR -29 233 123 380 198 25 136 chr4 10046060 10046222 -174242440 - L2 LINE L2 0 3313 3170 220 263 18 0 chr4 10046321 10046378 -174242284 + CT-rich Low_complexity Low_complexity 4 61 0 2390 66 3 0 chr4 10047018 10047320 -174241342 - AluY SINE Alu -8 303 1 295 140 0 53 chr4 10049438 10049495 -174239167 - MIR SINE MIR -61 147 94 312 256 17 0 chr4 10049746 10049918 -174238744 + (TG)n Simple_repeat Simple_repeat 1 175 0 323 350 50 7 chr4 10051164 10051311 -174237351 - MIR SINE MIR -61 147 14 586 223 0 0 chr4 10052200 10052321 -174236341 - MIR SINE MIR -62 200 80 2293 262 48 39 chr4 10052911 10053855 -174234807 - L1ME1 LINE L1 -4 6162 5201 2161 123 0 3 chr4 10053855 10054164 -174234498 - AluSc SINE Alu -1 308 1 2293 262 48 39 chr4 10054164 10054284 -174234378 - L1ME1 LINE L1 -965 5201 5084 233 299 188 17 chr4 10055268 10055385 -174233277 - L2 LINE L2 0 3272 3136 255 360 72 0 chr4 10055656 10055795 -174232867 + L2 LINE L2 2608 2756 -558 2342 87 0 0 chr4 10056317 10056628 -174232034 - AluY SINE Alu 0 311 1 2042 90 34 65 chr4 10056799 10057122 -174231540 - AluSq SINE Alu 0 313 1 195 304 0 0 chr4 10057313 10057359 -174231303 + MIR SINE MIR 217 262 0 205 303 130 34 chr4 10057568 10057806 -174230856 + L2 LINE L2 2908 3168 -104 877 157 6 9 chr4 10057910 10058250 -174230412 + (TCCA)n Simple_repeat Simple_repeat 1 338 0 204 296 0 102 chr4 10058273 10058371 -174230291 - L2 LINE L2 0 3272 3185 206 298 0 0 chr4 10058528 10058575 -174230087 + MIR SINE MIR 74 120 -142 317 154 0 0 chr4 10059896 10059948 -174228714 + MLT1B LTR MaLR 22 73 -317 536 304 85 27 chr4 10060075 10060299 -174228363 - MIR SINE MIR -4 258 22 317 273 219 11 chr4 10060456 10060639 -174228023 + MIR SINE MIR 21 241 -21 1783 236 31 5 chr4 10060719 10061164 -174227498 - L1ME1 LINE L1 -5 6161 5705 608 210 105 6 chr4 10061157 10061338 -174227324 - L1MCc LINE L1 -5058 1365 1167 * 1758 176 0 29 chr4 10061412 10061718 -174226944 + AluJo SINE Alu 1 297 -15 829 161 0 0 chr4 10062010 10062147 -174226515 + AluJo SINE Alu 1 137 -175 379 262 0 0 chr4 10112824 10112927 -174175735 + L1 LINE L1 4280 4382 -1764 197 330 152 35 chr4 10112927 10113345 -174175317 - L2 LINE L2 -45 3268 2738 458 317 49 22 chr4 10115410 10115593 -174173069 - MIR SINE MIR -73 189 2 211 327 84 0 chr4 10116303 10116410 -174172252 + MIR SINE MIR 2 117 -145 223 254 0 17 chr4 10116678 10116737 -174171925 + MIR SINE MIR 95 152 -56 198 0 0 0 chr4 10116812 10116834 -174171828 + (TGAA)n Simple_repeat Simple_repeat 3 24 0 205 378 64 13 chr4 10117017 10117173 -174171489 + L3 LINE CR1 1407 1570 -7 220 246 87 43 chr4 10117383 10117521 -174171141 - L2 LINE L2 -208 3064 2921 743 263 91 45 chr4 10118528 10118924 -174169738 - MLT1C LTR MaLR 0 467 54 417 290 36 67 chr4 10119395 10119431 -174169231 - MIR SINE MIR -18 244 208 2120 114 0 31 chr4 10119431 10119748 -174168914 - AluSx SINE Alu -5 307 1 417 290 36 67 chr4 10119748 10119905 -174168757 - MIR SINE MIR -54 208 45 351 203 0 0 chr4 10121040 10121109 -174167553 - MLT1D LTR MaLR 0 505 437 530 232 0 0 chr4 10121109 10121221 -174167441 + MER47A DNA MER2_type 1 112 -254 532 216 16 0 chr4 10121222 10121347 -174167315 + MER47A DNA MER2_type 240 366 0 1583 202 80 36 chr4 10121352 10121767 -174166895 - MLT1D LTR MaLR -72 433 1 182 331 83 53 chr4 10122075 10122244 -174166418 - MIR SINE MIR -44 218 45 211 336 60 0 chr4 10122273 10122389 -174166273 - L2 LINE L2 -9 3263 3141 190 332 72 9 chr4 10122426 10122649 -174166013 - L2 LINE L2 -340 2974 2738 187 267 287 0 chr4 10123054 10123155 -174165507 + MER5A DNA MER1_type 36 165 -24 * 334 220 66 0 chr4 10123089 10123180 -174165482 - MER5A DNA MER1_type -83 106 10 222 362 51 22 chr4 10123251 10123389 -174165273 - MIR3 SINE MIR -62 146 5 196 231 0 0 chr4 10123497 10123536 -174165126 - L2 LINE L2 -12 3301 3263 316 309 158 29 chr4 10124230 10124432 -174164230 + MIR SINE MIR 3 219 -43 189 299 41 62 chr4 10124904 10125001 -174163661 - MIR3 SINE MIR -26 182 88 250 286 134 9 chr4 10125536 10125648 -174163014 + MER96 DNA MER1_type? 11 136 -39 216 192 19 39 chr4 10125898 10125950 -174162712 + L2 LINE L2 3208 3258 -14 282 301 109 65 chr4 10126046 10126448 -174162214 - L2 LINE L2 -43 3229 2810 200 360 27 36 chr4 10127121 10127232 -174161430 - MIR SINE MIR -118 144 35 310 331 128 12 chr4 10128260 10128432 -174160230 + MIR SINE MIR 25 216 -46 196 275 12 62 chr4 10128556 10128636 -174160026 - MIR3 SINE MIR -6 202 127 377 258 129 12 chr4 10128817 10128980 -174159682 - L2 LINE L2 -257 3056 2875 931 71 20 45 chr4 10129490 10129813 -174158849 + (TGGA)n Simple_repeat Simple_repeat 1 315 0 297 51 0 0 chr4 10129825 10129864 -174158798 + (TGGA)n Simple_repeat Simple_repeat 1 39 0 224 297 203 7 chr4 10129908 10130046 -174158616 - MIR3 SINE MIR -41 167 3 22 56 0 0 chr4 10130111 10130147 -174158515 + AT_rich Low_complexity Low_complexity 1 36 0 1410 189 79 16 chr4 10130814 10131180 -174157482 - MLT1C LTR MaLR -76 391 3 214 316 13 13 chr4 10131364 10131443 -174157219 - MIR SINE MIR -117 145 67 332 298 0 10 chr4 10131540 10131644 -174157018 - MIR SINE MIR -61 147 45 283 241 60 0 chr4 10131740 10131823 -174156839 + MER81 DNA DNA 27 114 0 372 298 128 30 chr4 10132656 10132891 -174155771 + L2 LINE L2 2906 3163 -109 2261 206 27 2 chr4 10133109 10133547 -174155115 - L1MB5 LINE L1 -8 6166 5718 190 227 68 0 chr4 10133572 10133616 -174155046 - L2 LINE L2 -23 3290 3244 238 264 35 0 chr4 10133717 10133804 -174154858 + MER45 DNA AcHobo 26 115 -1466 309 357 8 16 chr4 10134701 10134830 -174153832 + MIR SINE MIR 17 144 -118 316 248 204 0 chr4 10134984 10135097 -174153565 + MIR SINE MIR 8 143 -119 180 359 39 10 chr4 10136778 10136881 -174151781 - MIR3 SINE MIR -6 202 97 194 283 19 0 chr4 10136999 10137052 -174151610 + MIR SINE MIR 90 143 -65 3325 222 34 4 chr4 10137347 10138181 -174150481 - L1 LINE L1 -2876 3270 2412 307 320 0 49 chr4 10138310 10138432 -174150230 + L2 LINE L2 3156 3271 -1 26 30 0 0 chr4 10138451 10138484 -174150178 + AT_rich Low_complexity Low_complexity 1 33 0 568 304 68 27 chr4 10138823 10139043 -174149619 - MIR SINE MIR -21 241 13 429 296 39 82 chr4 10139743 10139949 -174148713 - MIR SINE MIR 0 262 66 2148 106 0 3 chr4 10139962 10140265 -174148397 - AluSq SINE Alu -11 302 1 204 178 0 44 chr4 10143042 10143087 -174145575 + CT-rich Low_complexity Low_complexity 3 45 0 623 225 21 0 chr4 10143088 10143368 -174145294 + (TCCA)n Simple_repeat Simple_repeat 1 285 0 208 231 26 0 chr4 10143387 10143465 -174145197 + (TCCA)n Simple_repeat Simple_repeat 1 80 0 305 279 81 62 chr4 10143578 10143739 -174144923 + L2 LINE L2 3109 3272 0 257 303 107 0 chr4 10143745 10143867 -174144795 - MIR3 SINE MIR -45 163 29 201 240 42 5 chr4 10144349 10144421 -174144241 - MIR SINE MIR -68 140 91 230 273 0 0 chr4 10144918 10144973 -174143689 + L2 LINE L2 3208 3262 -10 195 296 61 10 chr4 10145892 10145990 -174142672 + MIR SINE MIR 34 136 -72 186 43 0 0 chr4 10146110 10146133 -174142529 + (GA)n Simple_repeat Simple_repeat 1 23 0 614 281 107 12 chr4 10146789 10147042 -174141620 - MLT1J2 LTR MaLR 0 450 174 515 258 122 36 chr4 10147359 10147688 -174140974 + L2 LINE L2 2828 3184 -129 1231 193 44 139 chr4 10147699 10148108 -174140554 - MLT1A2 LTR MaLR -4 370 1 335 279 135 0 chr4 10148125 10148229 -174140433 + L2 LINE L2 3195 3312 -1 372 278 98 40 chr4 10149659 10149832 -174138830 - MIR SINE MIR -12 250 68 301 257 119 9 chr4 10150109 10150218 -174138444 - L1M4 LINE L1 -3353 2793 2673 1509 204 40 3 chr4 10150241 10150433 -174138229 - AluJo SINE Alu -2 310 102 1994 134 23 7 chr4 10150433 10150740 -174137922 + AluSx SINE Alu 1 312 0 1509 204 40 3 chr4 10150740 10150846 -174137816 - AluJo SINE Alu -210 102 1 465 343 14 28 chr4 10151549 10151765 -174136897 - MIR SINE MIR 0 262 50 2017 105 0 20 chr4 10151981 10152275 -174136387 - AluJb SINE Alu -2 310 23 610 208 17 11 chr4 10154108 10154286 -174134376 + (CACCAT)n Simple_repeat Simple_repeat 1 179 0 300 290 0 0 chr4 10154286 10154410 -174134252 + (CCA)n Simple_repeat Simple_repeat 1 124 0 * 732 171 6 23 chr4 10154384 10154560 -174134102 + (CACCAT)n Simple_repeat Simple_repeat 4 176 0 278 202 0 45 chr4 10154695 10154784 -174133878 + (CACCAT)n Simple_repeat Simple_repeat 2 86 0 655 116 0 101 chr4 10154795 10154994 -174133668 + (CACCAT)n Simple_repeat Simple_repeat 1 179 0 655 116 0 101 chr4 10155008 10155207 -174133455 + (CACCAT)n Simple_repeat Simple_repeat 1 179 0 340 97 32 0 chr4 10155219 10155281 -174133381 + (CACCAT)n Simple_repeat Simple_repeat 5 68 0 688 176 23 6 chr4 10155292 10155468 -174133194 + (CACCAT)n Simple_repeat Simple_repeat 1 179 0 208 107 0 0 chr4 10155468 10155496 -174133166 + (CAT)n Simple_repeat Simple_repeat 1 28 0 318 317 137 22 chr4 10156005 10156188 -174132474 - MIR SINE MIR -6 256 53 608 310 70 0 chr4 10156232 10156445 -174132217 + MIR SINE MIR 35 262 0 220 98 0 59 chr4 10157535 10157586 -174131076 + (TTCC)n Simple_repeat Simple_repeat 4 51 0 249 318 163 20 chr4 10157821 10158220 -174130442 + L2 LINE L2 2817 3272 0 599 365 73 0 chr4 10158280 10158636 -174130026 + L3 LINE CR1 767 1148 -429 581 324 14 19 chr4 10158649 10158862 -174129800 + MIR SINE MIR 8 219 -43 2018 137 67 50 chr4 10160077 10160365 -174128297 + THE1B LTR MaLR 1 298 -66 1954 142 0 13 chr4 10160365 10160675 -174127987 + AluSx SINE Alu 6 311 -1 2018 137 67 50 chr4 10160675 10160744 -174127918 + THE1B LTR MaLR 298 364 0 251 175 140 0 chr4 10160804 10160861 -174127801 - MIR SINE MIR -117 145 81 427 176 0 0 chr4 10161285 10161359 -174127303 + MIR SINE MIR 79 152 -110 2908 235 46 51 chr4 10163613 10163652 -174125010 - L1ME1 LINE L1 -3 6163 6125 2031 101 0 29 chr4 10163652 10163968 -174124694 - AluSq SINE Alu -6 307 1 2908 235 46 51 chr4 10163968 10164827 -174123835 - L1ME1 LINE L1 -41 6125 5263 189 0 0 0 chr4 10164827 10164848 -174123814 + (TA)n Simple_repeat Simple_repeat 1 21 0 2218 103 3 13 chr4 10164848 10165160 -174123502 - AluSx SINE Alu -3 309 1 2908 235 46 51 chr4 10165160 10165477 -174123185 - L1ME1 LINE L1 -902 5264 4940 734 32 0 11 chr4 10165477 10165571 -174123091 + (TTTC)n Simple_repeat Simple_repeat 3 95 0 2908 235 46 51 chr4 10165571 10165617 -174123045 - L1ME1 LINE L1 -1226 4940 4895 348 183 175 8 chr4 10167271 10167391 -174121271 + MIR SINE MIR 92 231 -31 340 272 60 54 chr4 10167587 10167671 -174120991 - L1ME4a LINE L1 -1 6120 6038 2204 114 0 0 chr4 10167671 10167978 -174120684 + AluSx SINE Alu 1 307 -5 340 272 60 54 chr4 10167978 10168077 -174120585 - L1ME4a LINE L1 -83 6038 5936 314 319 143 38 chr4 10168467 10168677 -174119985 - L1ME4a LINE L1 -203 5918 5687 2316 116 40 27 chr4 10169694 10170064 -174118598 - THE1C LTR MaLR 0 375 1 235 289 144 0 chr4 10170965 10171055 -174117607 - MIR SINE MIR -80 182 80 286 207 117 27 chr4 10172096 10172207 -174116455 - MER113 DNA MER1_type? -302 219 99 2178 86 7 3 chr4 10172208 10172499 -174116163 + AluSg SINE Alu 6 297 -13 908 207 43 22 chr4 10174255 10174487 -174114175 - ORSL DNA AcHobo -20 255 19 189 392 63 7 chr4 10175624 10175767 -174112895 + MIR SINE MIR 87 237 -25 563 240 7 0 chr4 10177503 10178103 -174110559 + (CA)n Simple_repeat Simple_repeat 1 604 0 518 240 6 0 chr4 10178117 10178288 -174110374 + (CA)n Simple_repeat Simple_repeat 1 172 0 417 261 0 0 chr4 10178302 10178444 -174110218 + (CA)n Simple_repeat Simple_repeat 1 142 0 581 235 6 0 chr4 10178460 10178639 -174110023 + (CA)n Simple_repeat Simple_repeat 1 180 0 629 232 0 6 chr4 10178655 10178979 -174109683 + (CA)n Simple_repeat Simple_repeat 1 321 0 228 262 0 0 chr4 10179503 10179564 -174109098 - L1MB3 LINE L1 -1 6182 6122 235 294 73 0 chr4 10180403 10180512 -174108150 - L2 LINE L2 0 3272 3156 198 195 0 0 chr4 10181937 10181978 -174106684 - MIR SINE MIR -113 149 109 261 326 47 0 chr4 10182582 10182668 -174105994 + MIR3 SINE MIR 97 186 -22 489 244 7 37 chr4 10182849 10182984 -174105678 - MER45A DNA AcHobo -2 176 46 254 289 64 87 chr4 10183654 10183827 -174104835 + MIR SINE MIR 46 214 -48 591 308 7 0 chr4 10184360 10184506 -174104156 + MIR SINE MIR 8 154 -108 417 328 88 46 chr4 10185147 10185452 -174103210 - L2 LINE L2 -25 3247 2930 187 233 167 0 chr4 10185741 10185801 -174102861 + MIR3 SINE MIR 125 194 -14 207 0 0 0 chr4 10186557 10186580 -174102082 + (TGAA)n Simple_repeat Simple_repeat 4 26 0 287 295 48 9 chr4 10189234 10189339 -174099323 + MIR SINE MIR 117 225 -37 321 291 87 44 chr4 10189457 10189663 -174098999 - L1MB7 LINE L1 -163 6021 5807 308 254 42 99 chr4 10189942 10190084 -174098578 - L1MB7 LINE L1 -669 5452 5319 486 260 95 30 chr4 10190821 10190990 -174097672 - MER5A DNA MER1_type -6 183 4 391 306 30 63 chr4 10191027 10191329 -174097333 + L2 LINE L2 2776 3068 -245 252 0 0 0 chr4 10191395 10191423 -174097239 + (CCA)n Simple_repeat Simple_repeat 3 30 0 1086 159 0 3 chr4 10191539 10192332 -174096330 + (TGGA)n Simple_repeat Simple_repeat 1 790 0 402 316 71 9 chr4 10193658 10193870 -174094792 - L1ME LINE L1 -647 5517 5293 13217 190 47 21 chr4 10194692 10194910 -174093752 - L1PB4 LINE L1 -4 6344 6133 333 0 0 0 chr4 10194910 10194947 -174093715 + (TA)n Simple_repeat Simple_repeat 1 37 0 13217 190 47 21 chr4 10194947 10200178 -174088484 - L1PB4 LINE L1 -215 6133 772 4108 166 14 4 chr4 10200188 10200891 -174087771 - L1PB4 LINE L1 -4618 710 1 226 208 104 94 chr4 10201431 10201537 -174087125 + MIR SINE MIR 105 211 -51 2340 92 0 0 chr4 10201931 10202235 -174086427 - AluSc SINE Alu -5 304 1 369 320 4 17 chr4 10202328 10202525 -174086137 + CT-rich Low_complexity Low_complexity 1 194 0 246 171 26 13 chr4 10202532 10202608 -174086054 + (TCCA)n Simple_repeat Simple_repeat 1 77 0 1907 127 20 7 chr4 10204423 10204715 -174083947 - AluSx SINE Alu -10 302 7 276 344 33 49 chr4 10204735 10204918 -174083744 - L1ME LINE L1 -302 5819 5640 198 300 0 85 chr4 10205347 10205477 -174083185 - L2 LINE L2 -210 3062 2944 1960 202 35 86 chr4 10205498 10206146 -174082516 - LTR6A LTR ERV1 0 564 1 1674 229 52 52 chr4 10206216 10206714 -174081948 - MLT1D LTR MaLR -7 498 1 342 344 119 20 chr4 10206959 10207315 -174081347 - L2 LINE L2 -227 3045 2653 462 299 0 12 chr4 10207592 10208034 -174080628 + (CA)n Simple_repeat Simple_repeat 1 436 0 274 274 60 60 chr4 10208586 10208703 -174079959 + MIR3 SINE MIR 58 174 -34 378 339 17 0 chr4 10209223 10209338 -174079324 - L2 LINE L2 -20 3252 3136 1351 251 70 57 chr4 10209761 10210286 -174078376 - MLT1H LTR MaLR 0 549 18 643 255 57 48 chr4 10210929 10211325 -174077337 - MLT1J2 LTR MaLR -7 443 8 352 251 155 15 chr4 10211330 10211511 -174077151 + MIR SINE MIR 6 210 -52 482 266 122 18 chr4 10212436 10212658 -174076004 + MIR SINE MIR 14 258 -4 192 257 27 81 chr4 10213071 10213145 -174075517 + MIR3 SINE MIR 88 157 -51 235 293 192 5 chr4 10213489 10213687 -174074975 + MER115 DNA AcHobo 215 449 -244 279 286 169 0 chr4 10213829 10214007 -174074655 + L2 LINE L2 2562 2769 -545 270 318 28 9 chr4 10214414 10214521 -174074141 + L2 LINE L2 3154 3262 -51 848 205 19 6 chr4 10214553 10214714 -174073948 - FRAM SINE Alu -16 160 1 734 210 0 80 chr4 10214906 10215082 -174073580 + MER63 DNA MER1_type 1 788 -48 238 267 27 43 chr4 10215328 10215439 -174073223 + MIR SINE MIR 63 171 -37 204 318 15 0 chr4 10215642 10215708 -174072954 - MIR SINE MIR -77 131 65 231 188 21 0 chr4 10217057 10217105 -174071557 - MIR3 SINE MIR -48 160 112 615 202 0 0 chr4 10217603 10217702 -174070960 + FLAM_C SINE Alu 12 110 -33 319 335 52 21 chr4 10217760 10217954 -174070708 - MIR SINE MIR -3 259 60 1115 189 173 58 chr4 10218707 10219089 -174069573 - MSTB LTR MaLR 0 426 1 213 258 227 19 chr4 10219803 10220059 -174068603 - L2 LINE L2 -374 2940 2632 187 259 19 0 chr4 10220193 10220247 -174068415 - MIR SINE MIR -119 143 89 462 276 39 19 chr4 10220975 10221131 -174067531 + MIR SINE MIR 70 228 -34 243 0 0 0 chr4 10221538 10221565 -174067097 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 349 218 31 0 chr4 10223588 10223684 -174064978 - MIR SINE MIR -62 146 88 328 331 159 7 chr4 10224322 10224467 -174064195 + MIR SINE MIR 4 170 -92 610 281 24 117 chr4 10227784 10228204 -174060458 - L1ME3A LINE L1 -283 5887 5507 1855 236 156 67 chr4 10228222 10228929 -174059733 - MER21B LTR ERV1 -81 782 13 1200 267 111 102 chr4 10229117 10230673 -174057989 - L1MC4a LINE L1 -124 7918 6342 685 300 105 25 chr4 10230751 10231114 -174057548 - L1ME3A LINE L1 -139 6031 5640 394 117 0 164 chr4 10232971 10233185 -174055477 + (CCCCCA)n Simple_repeat Simple_repeat 2 180 0 225 104 0 130 chr4 10233235 10233312 -174055350 + (CCCCCA)n Simple_repeat Simple_repeat 3 69 0 204 308 25 17 chr4 10233811 10233931 -174054731 + CT-rich Low_complexity Low_complexity 3 123 0 214 235 12 74 chr4 10235133 10235214 -174053448 - MIR SINE MIR -15 247 172 257 227 0 45 chr4 10235449 10235515 -174053147 + MIR SINE MIR 83 145 -63 182 335 152 11 chr4 10236017 10236208 -174052454 - L2 LINE L2 -28 3244 3027 1765 201 105 20 chr4 10237301 10237630 -174051032 - L1MB5 LINE L1 0 6174 5797 1653 138 76 11 chr4 10237630 10237905 -174050757 - AluJb SINE Alu -19 293 1 1765 201 105 20 chr4 10237905 10238014 -174050648 - L1MB5 LINE L1 -377 5797 5699 532 208 88 0 chr4 10238015 10238140 -174050522 + MIR SINE MIR 102 237 -25 735 241 70 9 chr4 10238368 10238549 -174050113 - L1MB5 LINE L1 -1010 5136 4937 600 14 0 0 chr4 10238549 10238618 -174050044 + (TTTC)n Simple_repeat Simple_repeat 3 71 0 735 241 70 9 chr4 10238618 10238664 -174049998 - L1MB5 LINE L1 -1209 4937 4895 348 183 175 8 chr4 10240312 10240432 -174048230 + MIR SINE MIR 92 231 -31 339 275 73 28 chr4 10240627 10240708 -174047954 - L1ME4a LINE L1 -1 6120 6044 2398 108 0 0 chr4 10240708 10241015 -174047647 + AluSx SINE Alu 1 307 -5 339 275 73 28 chr4 10241015 10241111 -174047551 - L1ME4a LINE L1 -77 6044 5935 2183 111 43 25 chr4 10242730 10243098 -174045564 - THE1C LTR MaLR 0 375 1 226 318 122 0 chr4 10243990 10244097 -174044565 - MIR SINE MIR -80 182 63 318 209 118 18 chr4 10245107 10245217 -174043445 - MER113 DNA MER1_type? -302 219 99 2388 82 7 0 chr4 10245218 10245511 -174043151 + AluSg SINE Alu 6 300 -10 946 203 45 21 chr4 10247257 10247499 -174041163 - ORSL DNA AcHobo -20 255 8 210 364 79 0 chr4 10248622 10248762 -174039900 + MIR SINE MIR 87 237 -25 602 232 3 3 chr4 10250484 10250800 -174037862 + (CA)n Simple_repeat Simple_repeat 1 316 0 503 239 6 0 chr4 10250814 10250981 -174037681 + (CA)n Simple_repeat Simple_repeat 1 168 0 545 247 0 4 chr4 10250995 10251272 -174037390 + (CA)n Simple_repeat Simple_repeat 1 275 0 378 271 0 0 chr4 10251286 10251426 -174037236 + (CA)n Simple_repeat Simple_repeat 1 140 0 560 240 6 0 chr4 10251442 10251621 -174037041 + (CA)n Simple_repeat Simple_repeat 1 180 0 629 234 0 6 chr4 10251635 10251957 -174036705 + (CA)n Simple_repeat Simple_repeat 1 319 0 218 311 66 0 chr4 10253380 10253502 -174035160 - L2 LINE L2 0 3272 3143 194 195 0 0 chr4 10254905 10254946 -174033716 - MIR SINE MIR -113 149 109 257 326 47 0 chr4 10255549 10255635 -174033027 + MIR3 SINE MIR 97 186 -22 561 250 8 15 chr4 10255816 10255948 -174032714 - MER45A DNA AcHobo -2 176 46 234 279 68 87 chr4 10256616 10256777 -174031885 + MIR SINE MIR 46 203 -59 572 315 7 0 chr4 10257314 10257460 -174031202 + MIR SINE MIR 8 154 -108 371 328 88 46 chr4 10258101 10258406 -174030256 - L2 LINE L2 -25 3247 2930 186 304 54 0 chr4 10258691 10258747 -174029915 + L3 LINE CR1 1498 1556 -21 207 0 0 0 chr4 10259510 10259533 -174029129 + (TGAA)n Simple_repeat Simple_repeat 4 26 0 305 265 69 0 chr4 10262164 10262266 -174026396 + MIR SINE MIR 117 225 -37 308 283 93 44 chr4 10262384 10262589 -174026073 - L1MB7 LINE L1 -163 6021 5807 322 290 138 88 chr4 10262708 10263005 -174025657 - L1MB7 LINE L1 -491 5630 5319 510 272 92 17 chr4 10263722 10263895 -174024767 - MER5A DNA MER1_type 0 189 4 381 311 31 55 chr4 10263932 10264224 -174024438 + L2 LINE L2 2776 3060 -253 252 0 0 0 chr4 10264298 10264326 -174024336 + (CCA)n Simple_repeat Simple_repeat 3 30 0 1086 160 0 0 chr4 10264440 10265231 -174023431 + (TGGA)n Simple_repeat Simple_repeat 1 791 0 367 321 71 9 chr4 10266548 10266760 -174021902 - L1ME LINE L1 -645 5517 5293 13530 193 48 16 chr4 10267582 10267800 -174020862 - L1PB4 LINE L1 -4 6344 6134 207 0 0 0 chr4 10267800 10267823 -174020839 + (TA)n Simple_repeat Simple_repeat 2 24 0 13530 193 48 16 chr4 10267823 10273024 -174015638 - L1PB4 LINE L1 -214 6134 772 4159 167 14 0 chr4 10273034 10273734 -174014928 - L1PB4 LINE L1 -4618 710 1 219 208 104 94 chr4 10274274 10274380 -174014282 + MIR SINE MIR 105 211 -51 2486 92 0 0 chr4 10274772 10275077 -174013585 - AluSc SINE Alu -4 305 1 369 320 4 17 chr4 10275170 10275367 -174013295 + CT-rich Low_complexity Low_complexity 1 194 0 246 171 26 13 chr4 10275374 10275450 -174013212 + (TCCA)n Simple_repeat Simple_repeat 1 77 0 2143 128 20 0 chr4 10277215 10277512 -174011150 - AluSx SINE Alu -9 303 1 276 343 39 44 chr4 10277524 10277705 -174010957 - L1ME LINE L1 -302 5819 5640 1954 202 35 86 chr4 10278277 10278925 -174009737 - LTR6A LTR ERV1 0 564 1 1712 231 53 45 chr4 10278995 10279489 -174009173 - MLT1D LTR MaLR -7 498 1 334 337 129 9 chr4 10279733 10280000 -174008662 - L2 LINE L2 -227 3045 2748 351 289 0 12 chr4 10280293 10280794 -174007868 + (CA)n Simple_repeat Simple_repeat 1 494 0 294 240 53 93 chr4 10281302 10281452 -174007210 + MIR3 SINE MIR 31 174 -34 371 339 17 0 chr4 10281970 10282085 -174006577 - L2 LINE L2 -20 3252 3136 1585 235 80 39 chr4 10282496 10283007 -174005655 - MLT1H LTR MaLR 0 549 18 637 252 43 5 chr4 10283647 10284033 -174004629 - MLT1J2 LTR MaLR -7 443 15 379 249 163 11 chr4 10284045 10284227 -174004435 + MIR SINE MIR 6 214 -48 545 272 121 13 chr4 10285146 10285370 -174003292 + MIR SINE MIR 14 261 -1 203 257 27 81 chr4 10285778 10285852 -174002810 + MIR3 SINE MIR 88 157 -51 322 286 169 0 chr4 10286533 10286711 -174001951 + L2 LINE L2 2562 2769 -545 288 318 28 9 chr4 10287111 10287218 -174001444 + L2 LINE L2 3154 3262 -51 810 219 12 0 chr4 10287250 10287410 -174001252 - FRAM SINE Alu -17 159 1 679 210 0 80 chr4 10287601 10287777 -174000885 + MER63 DNA MER1_type 1 788 -48 301 262 28 21 chr4 10288021 10288130 -174000532 + MIR SINE MIR 63 171 -37 213 318 15 0 chr4 10288333 10288399 -174000263 - MIR SINE MIR -77 131 65 234 188 21 0 chr4 10289743 10289791 -173998871 - MIR3 SINE MIR -48 160 112 630 192 0 0 chr4 10290281 10290380 -173998282 + FLAM_C SINE Alu 12 110 -33 357 366 36 5 chr4 10290438 10290632 -173998030 - MIR SINE MIR -3 259 60 1193 195 174 50 chr4 10291385 10291764 -173996898 - MSTB LTR MaLR 0 426 1 260 274 189 37 chr4 10292167 10292729 -173995933 - L2 LINE L2 -1 3271 2632 191 259 19 0 chr4 10292862 10292916 -173995746 - MIR SINE MIR -119 143 89 506 269 39 19 chr4 10293635 10293791 -173994871 + MIR SINE MIR 70 228 -34 243 0 0 0 chr4 10294192 10294219 -173994443 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 204 309 24 24 chr4 10294801 10294885 -173993777 - L2 LINE L2 -13 3259 3176 357 233 29 0 chr4 10296223 10296326 -173992336 - MIR SINE MIR -62 146 88 341 338 159 7 chr4 10296962 10297107 -173991555 + MIR SINE MIR 4 170 -92 603 279 29 113 chr4 10300415 10300831 -173987831 - L1ME3A LINE L1 -283 5887 5507 1713 236 158 61 chr4 10300849 10301551 -173987111 - MER21B LTR ERV1 -81 782 13 1132 264 138 114 chr4 10301739 10302989 -173985673 - L1MC4 LINE L1 -124 7918 6623 180 0 0 0 chr4 10302989 10303009 -173985653 + (GGAA)n Simple_repeat Simple_repeat 4 23 0 1132 264 138 114 chr4 10303009 10303287 -173985375 - L1MC4 LINE L1 -1419 6623 6353 615 306 96 16 chr4 10303367 10303730 -173984932 - L1ME3A LINE L1 -139 6031 5640 205 176 0 155 chr4 10305444 10305637 -173983025 + C-rich Low_complexity Low_complexity 3 165 0 210 138 0 125 chr4 10305857 10305937 -173982725 + (CCCCCA)n Simple_repeat Simple_repeat 3 72 0 384 98 0 152 chr4 10305976 10306140 -173982522 + (CCCCCA)n Simple_repeat Simple_repeat 3 141 0 1269 249 64 23 chr4 10306367 10306804 -173981858 - MLT1C LTR MaLR -6 461 7 1023 264 162 26 chr4 10307732 10308516 -173980146 - L2 LINE L2 -8 3305 2421 260 258 16 32 chr4 10309567 10309691 -173978971 + CT-rich Low_complexity Low_complexity 3 124 0 204 40 0 0 chr4 10309761 10309786 -173978876 + (GGGGA)n Simple_repeat Simple_repeat 2 26 0 320 130 19 0 chr4 10309976 10310030 -173978632 - MLT1C LTR MaLR -409 58 4 390 173 13 0 chr4 10310698 10310773 -173977889 - MLT1C LTR MaLR -69 398 323 213 265 0 0 chr4 10311013 10311062 -173977600 - MIR SINE MIR -111 151 103 345 189 18 18 chr4 10311986 10312097 -173976565 + CT-rich Low_complexity Low_complexity 3 113 0 873 175 11 23 chr4 10312110 10312565 -173976097 + CT-rich Low_complexity Low_complexity 1 449 0 345 310 40 38 chr4 10312573 10312736 -173975926 + MIR SINE MIR 5 180 -62 861 175 2 0 chr4 10313871 10314330 -173974332 + (TGAG)n Simple_repeat Simple_repeat 1 460 0 267 234 0 0 chr4 10314344 10314421 -173974241 + (TGAG)n Simple_repeat Simple_repeat 3 79 0 195 42 0 0 chr4 10314449 10314473 -173974189 + (CAG)n Simple_repeat Simple_repeat 1 24 0 183 299 98 43 chr4 10314842 10315006 -173973656 - L2 LINE L2 -520 2794 2622 2142 123 0 3 chr4 10315314 10315615 -173973047 - AluSx SINE Alu -12 300 1 349 318 73 7 chr4 10315780 10315931 -173972731 + MIR SINE MIR 32 192 -70 264 291 0 44 chr4 10316053 10316235 -173972427 + (TTGGGG)n Simple_repeat Simple_repeat 2 175 0 303 293 0 37 chr4 10316337 10316667 -173971995 + (TTGGGG)n Simple_repeat Simple_repeat 1 317 0 222 263 0 65 chr4 10316877 10317063 -173971599 + (TTGGGG)n Simple_repeat Simple_repeat 2 175 0 219 296 12 19 chr4 10317013 10317175 -173971487 + (GGGTG)n Simple_repeat Simple_repeat 2 162 0 * 208 274 0 65 chr4 10317107 10317293 -173971369 + (TTGGGG)n Simple_repeat Simple_repeat 2 175 0 * 260 278 11 33 chr4 10317245 10317425 -173971237 + (GGGTG)n Simple_repeat Simple_repeat 2 177 0 * 313 255 0 54 chr4 10317319 10317503 -173971159 + (TTGGGG)n Simple_repeat Simple_repeat 2 175 0 235 311 0 33 chr4 10317417 10317597 -173971065 + (TTAGGG)n Simple_repeat Simple_repeat 2 175 0 * 279 296 3 35 chr4 10317809 10318156 -173970506 + (TTGGGG)n Simple_repeat Simple_repeat 1 335 0 318 308 0 27 chr4 10318350 10318691 -173969971 + (TTGGGG)n Simple_repeat Simple_repeat 1 331 0 284 290 0 32 chr4 10318719 10318874 -173969788 + (TTGGGG)n Simple_repeat Simple_repeat 2 151 0 212 374 0 0 chr4 10318813 10318987 -173969675 + (TTAGGG)n Simple_repeat Simple_repeat 2 175 0 * 2116 171 45 3 chr4 10319080 10319454 -173969208 - MLT1B LTR MaLR 0 390 1 252 0 0 0 chr4 10319477 10319505 -173969157 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 190 333 111 47 chr4 10319981 10320152 -173968510 + MIR SINE MIR 8 189 -73 210 278 93 62 chr4 10320198 10320295 -173968367 + L2 LINE L2 3212 3311 -2 418 332 124 13 chr4 10321732 10322039 -173966623 - L2 LINE L2 0 3272 2932 259 312 35 30 chr4 10322230 10322371 -173966291 + MIR SINE MIR 14 149 -59 319 267 30 20 chr4 10322516 10322617 -173966045 + MIR SINE MIR 98 199 -63 339 331 48 0 chr4 10325349 10325473 -173963189 + MIR SINE MIR 29 158 -104 239 316 25 0 chr4 10325748 10325827 -173962835 + L2 LINE L2 3173 3253 -19 273 269 234 28 chr4 10326149 10326294 -173962368 - MIR SINE MIR -80 182 8 180 262 90 107 chr4 10326394 10326516 -173962146 + MIR SINE MIR 28 147 -115 357 329 79 73 chr4 10327141 10327730 -173960932 - L2 LINE L2 0 3272 2649 223 261 77 0 chr4 10328127 10328192 -173960470 + MIR SINE MIR 123 192 -70 408 286 64 14 chr4 10328965 10329105 -173959557 - MIR SINE MIR -83 179 33 508 233 78 49 chr4 10329241 10329572 -173959090 - MLT1J2 LTR MaLR -23 427 46 197 357 47 0 chr4 10329668 10329797 -173958865 - L2 LINE L2 -620 2694 2560 197 336 219 0 chr4 10330775 10330903 -173957759 + MIR3 SINE MIR 45 200 -8 245 389 108 32 chr4 10331070 10331412 -173957250 - L3 LINE CR1 -253 1324 957 735 269 45 14 chr4 10331970 10332193 -173956469 + MIR SINE MIR 32 261 -1 738 202 0 0 chr4 10332205 10332383 -173956279 + (TGG)n Simple_repeat Simple_repeat 2 179 0 240 67 0 0 chr4 10332383 10332413 -173956249 + (ATG)n Simple_repeat Simple_repeat 1 30 0 763 244 36 0 chr4 10332720 10332888 -173955774 - MER5B DNA MER1_type -4 174 1 225 247 14 41 chr4 10333186 10333259 -173955403 - MIR SINE MIR -65 143 73 609 213 0 3 chr4 10333261 10333515 -173955147 + (TCCA)n Simple_repeat Simple_repeat 1 253 0 208 333 48 0 chr4 10333935 10333998 -173954664 + L2 LINE L2 3233 3298 -15 328 306 60 16 chr4 10334021 10334204 -173954458 - L2 LINE L2 -190 3123 2933 190 320 117 52 chr4 10335303 10335534 -173953128 - L2 LINE L2 -121 3151 2906 203 293 0 0 chr4 10336571 10336629 -173952033 - L2 LINE L2 -335 2978 2921 274 301 32 49 chr4 10336969 10337092 -173951570 + L2 LINE L2 2634 2754 -560 279 269 23 46 chr4 10337152 10337282 -173951380 + L2 LINE L2 3133 3259 -13 261 119 0 0 chr4 10337282 10337324 -173951338 + (TGAA)n Simple_repeat Simple_repeat 1 42 0 1286 238 121 12 chr4 10337838 10338259 -173950403 - MLT1C LTR MaLR 0 467 1 188 135 27 0 chr4 10338806 10338843 -173949819 + (CA)n Simple_repeat Simple_repeat 1 38 0 948 206 127 57 chr4 10339352 10339668 -173948994 - MLT2C1 LTR ERVL -47 350 13 185 333 61 27 chr4 10339823 10339970 -173948692 + L2 LINE L2 3045 3196 -117 207 177 122 68 chr4 10340415 10340562 -173948100 + (GCTG)n Simple_repeat Simple_repeat 3 157 0 410 352 116 0 chr4 10341401 10341719 -173946943 + L2 LINE L2 2957 3311 -2 270 326 12 0 chr4 10341740 10341826 -173946836 + L2 LINE L2 3184 3270 -2 1076 255 28 31 chr4 10342097 10342646 -173946016 - MER77 LTR ERV1 -7 598 1 283 265 39 29 chr4 10342948 10343050 -173945612 - L2 LINE L2 -20 3252 3150 206 269 90 0 chr4 10343612 10343690 -173944972 + MER91A DNA MER1_type 21 105 -91 1189 230 90 35 chr4 10346060 10346224 -173942438 + MLT1C LTR MaLR 1 155 -312 2374 66 0 10 chr4 10346224 10346528 -173942134 + AluY SINE Alu 1 301 -10 1189 230 90 35 chr4 10346528 10346788 -173941874 + MLT1C LTR MaLR 155 458 -9 1444 54 0 16 chr4 10346930 10347116 -173941546 + L1PA8 LINE L1 5990 6172 0 674 257 138 20 chr4 10349807 10350238 -173938424 - MLT1D LTR MaLR 0 390 2 272 230 11 81 chr4 10352229 10352316 -173936346 - L2 LINE L2 0 3272 3192 189 296 0 0 chr4 10354165 10354209 -173934453 + MIR SINE MIR 219 262 0 245 327 82 62 chr4 10354330 10354779 -173933883 + L2 LINE L2 2811 3268 -4 237 261 0 31 chr4 10354846 10354911 -173933751 + MIR3 SINE MIR 96 158 -50 1644 194 84 19 chr4 10355461 10355889 -173932773 - L1MA8 LINE L1 -278 6013 5558 540 268 76 98 chr4 10356149 10356597 -173932065 - MLT1J2 LTR MaLR -10 440 3 273 356 70 0 chr4 10356737 10356852 -173931810 + MIR3 SINE MIR 47 169 -39 414 114 0 0 chr4 10357241 10357311 -173931351 + (CA)n Simple_repeat Simple_repeat 2 71 0 448 365 88 55 chr4 10357341 10357583 -173931079 - L1ME4a LINE L1 -158 5963 5704 1908 171 44 22 chr4 10357583 10357945 -173930717 - MLT1A2 LTR MaLR 0 374 5 448 365 88 55 chr4 10357945 10358064 -173930598 - L1ME4a LINE L1 -417 5704 5590 320 307 63 0 chr4 10358625 10358752 -173929910 + MIR SINE MIR 48 182 -80 274 264 110 11 chr4 10358856 10358947 -173929715 - MIR3 SINE MIR -3 205 106 257 343 97 27 chr4 10359457 10359634 -173929028 - MIR SINE MIR -33 175 3 265 271 0 0 chr4 10359669 10359739 -173928923 + C-rich Low_complexity Low_complexity 1 70 0 263 295 103 12 chr4 10360248 10360441 -173928221 - MIR3 SINE MIR -44 218 2 503 326 45 22 chr4 10360869 10361093 -173927569 - MIR SINE MIR -16 246 18 209 279 0 7 chr4 10362330 10362466 -173926196 + (TG)n Simple_repeat Simple_repeat 1 135 0 186 326 141 11 chr4 10363240 10363332 -173925330 - L2 LINE L2 -5 3267 3164 257 312 21 71 chr4 10365891 10366032 -173922630 - MIR3 SINE MIR -71 137 4 383 133 76 0 chr4 10366683 10366788 -173921874 + (CAGAGA)n Simple_repeat Simple_repeat 2 114 0 387 340 98 16 chr4 10367654 10367848 -173920814 - MIR SINE MIR -21 241 32 532 229 48 101 chr4 10367851 10368039 -173920623 + MER45A DNA AcHobo 1 178 0 237 325 95 16 chr4 10368788 10368914 -173919748 + MIR SINE MIR 108 243 -19 437 359 30 0 chr4 10368962 10369160 -173919502 + MIR SINE MIR 23 226 -36 186 277 229 0 chr4 10369160 10369243 -173919419 + MIR SINE MIR 82 183 -79 252 184 0 0 chr4 10369708 10369757 -173918905 + (TCCA)n Simple_repeat Simple_repeat 4 52 0 305 313 80 28 chr4 10369824 10370000 -173918662 + MIR SINE MIR 69 253 -9 2136 107 3 7 chr4 10370416 10370725 -173917937 - AluSc SINE Alu -1 308 1 305 195 0 12 chr4 10371436 10371518 -173917144 + GA-rich Low_complexity Low_complexity 4 84 0 307 297 23 62 chr4 10371566 10371602 -173917060 + L1ME4a LINE L1 5998 6034 -87 1990 99 60 0 chr4 10371602 10371886 -173916776 - AluSx SINE Alu -9 303 3 307 297 23 62 chr4 10371886 10371977 -173916685 + L1ME4a LINE L1 6034 6120 -1 254 283 114 18 chr4 10372369 10372535 -173916127 - LTR33A LTR ERVL -73 450 269 204 297 193 36 chr4 10373971 10374163 -173914499 + L2 LINE L2 2926 3147 -166 249 83 0 0 chr4 10374586 10374622 -173914040 + (GA)n Simple_repeat Simple_repeat 2 37 0 243 61 0 0 chr4 10374653 10374692 -173913970 + (CA)n Simple_repeat Simple_repeat 1 72 0 243 61 0 0 chr4 10374692 10374725 -173913937 + (CA)n Simple_repeat Simple_repeat 2 34 0 219 36 0 107 chr4 10374744 10374800 -173913862 + (CAGAGA)n Simple_repeat Simple_repeat 3 52 0 498 122 31 0 chr4 10375599 10375697 -173912965 + GA-rich Low_complexity Low_complexity 2 102 0 416 236 49 24 chr4 10376315 10376438 -173912224 + MIR SINE MIR 20 145 -63 238 318 55 36 chr4 10377654 10377764 -173910898 - L2 LINE L2 -96 3217 3106 1286 223 72 19 chr4 10377926 10378303 -173910359 - MER77 LTR ERV1 -208 397 1 278 302 21 9 chr4 10378393 10378504 -173910158 - MIR SINE MIR -59 149 75 370 272 54 60 chr4 10379064 10379248 -173909414 + MIR3 SINE MIR 7 189 -19 183 100 0 0 chr4 10379323 10379353 -173909309 + (TTCA)n Simple_repeat Simple_repeat 2 31 0 234 324 100 62 chr4 10379359 10379569 -173909093 - L2 LINE L2 -18 3254 3037 183 304 18 0 chr4 10382684 10382740 -173905922 + MIR SINE MIR 82 138 -70 288 263 102 34 chr4 10384233 10384351 -173904311 + MIR SINE MIR 21 146 -116 286 240 58 26 chr4 10384980 10385120 -173903542 + MIR3 SINE MIR 89 229 -33 252 267 73 63 chr4 10385260 10385451 -173903211 - MIR SINE MIR -43 219 27 385 220 41 23 chr4 10385849 10386147 -173902515 + CT-rich Low_complexity Low_complexity 1 303 0 228 280 0 0 chr4 10386149 10386199 -173902463 + C-rich Low_complexity Low_complexity 1 50 0 301 201 35 41 chr4 10386201 10386370 -173902292 + CT-rich Low_complexity Low_complexity 1 168 0 250 269 74 37 chr4 10386495 10386603 -173902059 - MIR3 SINE MIR -16 192 81 237 175 0 0 chr4 10386637 10386677 -173901985 - L2 LINE L2 -8 3264 3225 528 214 172 38 chr4 10387329 10387673 -173900989 + MLT1C LTR MaLR 7 488 -17 221 257 16 49 chr4 10389105 10389288 -173899374 + CT-rich Low_complexity Low_complexity 4 180 0 342 217 24 0 chr4 10389527 10389610 -173899052 - MER33 DNA MER1_type -6 357 273 1414 269 62 13 chr4 10389611 10390079 -173898583 + L1MC1 LINE L1 5836 6326 -7 793 163 49 20 chr4 10390085 10390288 -173898374 - MER33 DNA MER1_type -71 253 45 1768 197 90 24 chr4 10390466 10390934 -173897728 + MLT1D LTR MaLR 1 499 -6 324 64 0 0 chr4 10391269 10391316 -173897346 + (TC)n Simple_repeat Simple_repeat 1 47 0 1958 100 38 10 chr4 10391651 10391964 -173896698 - AluSx SINE Alu 0 312 1 1155 233 177 3 chr4 10392025 10392403 -173896259 - MLT1C LTR MaLR -17 450 7 274 278 48 88 chr4 10392409 10392682 -173895980 + L2 LINE L2 2963 3224 -89 272 309 43 50 chr4 10394344 10394483 -173894179 + MIR SINE MIR 33 170 -92 189 242 0 91 chr4 10394509 10394575 -173894087 + MIR SINE MIR 30 89 -119 182 206 175 0 chr4 10395583 10395646 -173893016 + MIR SINE MIR 108 181 -81 195 42 0 0 chr4 10396058 10396082 -173892580 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 330 226 105 15 chr4 10396302 10396435 -173892227 - MIR SINE MIR -70 192 48 193 250 0 21 chr4 10397042 10397090 -173891572 + MIR3 SINE MIR 108 154 -54 201 74 0 0 chr4 10397414 10397441 -173891221 + (TGAA)n Simple_repeat Simple_repeat 4 30 0 1362 214 82 34 chr4 10397705 10398148 -173890514 + MLT1D LTR MaLR 22 467 0 500 314 47 0 chr4 10398662 10398853 -173889809 + MIR SINE MIR 28 227 -35 360 284 115 50 chr4 10399362 10399576 -173889086 + MIR SINE MIR 18 234 -28 209 279 48 57 chr4 10400095 10400200 -173888462 - MIR SINE MIR -29 179 75 444 292 8 0 chr4 10400424 10400544 -173888118 + MIR3 SINE MIR 81 201 -7 263 367 41 0 chr4 10400804 10400902 -173887760 - L2 LINE L2 -12 3301 3200 1398 158 81 0 chr4 10400974 10401247 -173887415 + AluJo SINE Alu 1 295 -17 216 0 0 0 chr4 10401836 10401860 -173886802 + (CA)n Simple_repeat Simple_repeat 1 24 0 385 298 56 25 chr4 10402223 10402384 -173886278 - MIR SINE MIR -74 188 23 296 295 0 0 chr4 10402801 10402879 -173885783 + CT-rich Low_complexity Low_complexity 2 79 0 353 287 25 0 chr4 10403039 10403163 -173885499 - MLT1J2 LTR MaLR -215 194 67 247 215 92 0 chr4 10403188 10403253 -173885409 - MLT1J1 LTR MaLR -310 136 66 252 200 92 0 chr4 10403278 10403343 -173885319 - MLT1J1 LTR MaLR -310 136 66 5306 181 33 9 chr4 10403470 10404521 -173884141 - L1MC3 LINE L1 -2 7783 6708 2024 214 55 88 chr4 10404548 10405147 -173883515 - MER119 DNA MER1_type 0 583 5 2150 99 0 17 chr4 10405612 10405914 -173882748 + AluSg SINE Alu 1 297 -13 196 320 0 13 chr4 10407699 10407777 -173880885 - L2 LINE L2 -287 2985 2909 204 100 25 0 chr4 10407948 10407988 -173880674 - L2 LINE L2 -218 3054 3014 2149 284 86 25 chr4 10408600 10409711 -173878951 - Charlie7 DNA MER1_type -7 2605 1428 307 235 20 20 chr4 10409769 10409871 -173878791 - Charlie7 DNA MER1_type -2444 168 67 1145 147 0 0 chr4 10409887 10410064 -173878598 - AluSg/x SINE Alu 0 310 134 262 315 196 4 chr4 10410254 10410514 -173878148 + L2 LINE L2 2867 3176 -137 452 174 0 10 chr4 10410939 10411037 -173877625 + GA-rich Low_complexity Low_complexity 1 97 0 1489 184 28 46 chr4 10411591 10411982 -173876680 - Charlie5 DNA MER1_type 0 2617 2234 303 269 120 0 chr4 10411979 10412087 -173876575 - Charlie5 DNA MER1_type -2485 127 7 * 217 288 0 0 chr4 10412903 10412962 -173875700 - L2 LINE L2 -229 3043 2985 399 338 61 13 chr4 10413148 10413376 -173875286 - MER102b DNA MER1_type -1 340 102 181 278 56 14 chr4 10413438 10413510 -173875152 - L2 LINE L2 -569 2745 2671 1348 184 139 65 chr4 10414352 10414754 -173873908 + MSTB1 LTR MaLR 1 432 0 411 294 18 65 chr4 10415038 10415208 -173873454 + MIR3 SINE MIR 33 194 -14 25 51 0 0 chr4 10415623 10415662 -173873000 + AT_rich Low_complexity Low_complexity 1 39 0 383 289 90 0 chr4 10415767 10415931 -173872731 - MIR SINE MIR -5 203 16 209 355 66 13 chr4 10416235 10416387 -173872275 - L2 LINE L2 -206 3066 2907 1710 155 13 26 chr4 10416585 10416889 -173871773 + AluSx SINE Alu 5 304 -8 448 266 55 0 chr4 10417342 10417470 -173871192 - MIR SINE MIR -54 208 74 448 272 96 92 chr4 10417539 10417778 -173870884 + L1ME LINE L1 5290 5529 -592 366 291 118 0 chr4 10418323 10418450 -173870212 - L1ME4a LINE L1 -207 5914 5773 574 307 62 8 chr4 10418468 10418709 -173869953 - MIR SINE MIR -8 254 1 215 228 0 0 chr4 10419020 10419077 -173869585 + A-rich Low_complexity Low_complexity 1 57 0 217 191 0 21 chr4 10419359 10419406 -173869256 + L2 LINE L2 3263 3308 -5 382 266 63 28 chr4 10419975 10420118 -173868544 - MLT1K LTR MaLR -369 219 72 426 39 0 0 chr4 10421152 10421204 -173867458 + (TG)n Simple_repeat Simple_repeat 2 53 0 208 330 30 10 chr4 10421336 10421436 -173867226 + MIR SINE MIR 43 144 -64 298 320 47 16 chr4 10422343 10422471 -173866191 - L2 LINE L2 -5 3267 3136 252 292 87 56 chr4 10424490 10424651 -173864011 + HAL1b LINE L1 482 647 -701 262 297 239 7 chr4 10427070 10427225 -173861437 - L2 LINE L2 -541 2773 2583 287 343 119 21 chr4 10427235 10427521 -173861141 - L2 LINE L2 -870 2444 2131 562 211 29 0 chr4 10427701 10427876 -173860786 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 856 163 12 0 chr4 10427903 10428075 -173860587 + (TCCA)n Simple_repeat Simple_repeat 2 175 0 255 320 16 8 chr4 10428359 10428481 -173860181 + MIR SINE MIR 94 216 -46 236 273 0 0 chr4 10428950 10429005 -173859657 - MIR SINE MIR -68 140 86 983 213 63 14 chr4 10429266 10429473 -173859189 - MER20 DNA MER1_type 0 219 3 188 100 0 0 chr4 10430155 10430185 -173858477 + L2 LINE L2 2948 2977 -336 430 248 51 15 chr4 10430686 10430823 -173857839 + MIR SINE MIR 46 187 -75 860 177 6 0 chr4 10432442 10432617 -173856045 + (TCCA)n Simple_repeat Simple_repeat 4 179 0 839 201 3 0 chr4 10432655 10433013 -173855649 + (TCCA)n Simple_repeat Simple_repeat 1 359 0 221 344 135 43 chr4 10433049 10433212 -173855450 - L2 LINE L2 -3 3310 3133 485 236 24 0 chr4 10433545 10433668 -173854994 - MER58C DNA MER1_type 0 215 90 1385 206 113 21 chr4 10433677 10434100 -173854562 - MLT1C LTR MaLR 0 467 6 244 364 35 14 chr4 10434337 10434480 -173854182 - MIR SINE MIR -28 234 89 261 273 13 13 chr4 10434684 10434761 -173853901 - L3 LINE CR1 -89 1488 1412 896 221 124 0 chr4 10435370 10435628 -173853034 - MLT1C LTR MaLR -153 314 25 219 333 29 36 chr4 10436618 10436756 -173851906 - MIR3 SINE MIR -27 181 45 2280 137 33 22 chr4 10436763 10437122 -173851540 + THE1B LTR MaLR 2 364 0 257 245 134 28 chr4 10437183 10437353 -173851309 + MIR SINE MIR 16 205 -57 192 303 84 67 chr4 10437367 10437486 -173851176 + L2 LINE L2 3189 3309 -4 351 336 0 0 chr4 10437744 10437848 -173850814 - MIR3 SINE MIR -21 187 84 397 283 154 38 chr4 10438970 10439210 -173849452 - HAL1b LINE L1 -629 719 452 325 308 62 82 chr4 10439388 10439596 -173849066 - HAL1 LINE L1 -1218 1289 1086 3110 97 16 9 chr4 10439620 10440062 -173848600 - L1PA11 LINE L1 -3 6171 5727 620 301 42 5 chr4 10440252 10440468 -173848194 + L3 LINE CR1 1294 1517 -60 207 366 47 11 chr4 10442213 10442404 -173846258 - L2 LINE L2 -228 3044 2847 2272 103 0 0 chr4 10442693 10443003 -173845659 - AluSg SINE Alu 0 310 1 646 246 78 6 chr4 10443004 10443183 -173845479 - MIR SINE MIR -35 227 36 253 255 112 20 chr4 10443903 10444001 -173844661 - MIR SINE MIR -58 150 44 719 196 0 0 chr4 10444068 10444201 -173844461 + MLT1D LTR MaLR 368 500 -5 290 266 8 32 chr4 10444442 10444566 -173844096 + CT-rich Low_complexity Low_complexity 1 121 0 22 0 0 0 chr4 10445547 10445569 -173843093 + AT_rich Low_complexity Low_complexity 1 22 0 756 301 77 18 chr4 10445724 10446077 -173842585 + MLT1I LTR MaLR 13 396 -13 246 32 0 0 chr4 10446120 10446151 -173842511 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 260 276 94 47 chr4 10446242 10446369 -173842293 - MLT1G1 LTR MaLR 0 555 423 634 147 0 0 chr4 10446393 10446488 -173842174 + AluJb SINE Alu 207 301 -11 665 279 32 23 chr4 10446488 10446707 -173841955 - MLT1G1 LTR MaLR -359 236 16 287 313 62 23 chr4 10447301 10447429 -173841233 - L2 LINE L2 -1 3271 3139 263 388 18 24 chr4 10448014 10448184 -173840478 + MIR SINE MIR 12 180 -82 2540 218 89 48 chr4 10448259 10448967 -173839695 - MER21B LTR ERV1 -115 748 12 268 303 92 17 chr4 10449099 10449218 -173839444 - L2 LINE L2 0 3272 3145 272 211 92 0 chr4 10450362 10450438 -173838224 - MER92B LTR ERV1 -8 628 546 515 255 182 0 chr4 10451019 10451211 -173837451 - MER92B LTR ERV1 -52 584 358 286 194 41 71 chr4 10451226 10451263 -173837399 - MER92B LTR ERV1 -385 251 214 2273 105 0 0 chr4 10451263 10451569 -173837093 - AluSg SINE Alu -4 306 1 286 194 41 71 chr4 10451569 10451629 -173837033 - MER92B LTR ERV1 -422 214 157 2007 152 7 0 chr4 10453114 10453424 -173835238 - AluSx SINE Alu 0 312 1 646 142 35 0 chr4 10453515 10453628 -173835034 - MLT1D LTR MaLR -17 488 372 381 93 0 0 chr4 10453947 10454001 -173834661 + (CA)n Simple_repeat Simple_repeat 2 55 0 283 298 35 15 chr4 10454012 10454210 -173834452 - L1MEd LINE L1 -3701 2428 2227 1267 127 24 19 chr4 10454211 10454416 -173834246 - AluSq SINE Alu -40 273 68 1025 170 12 0 chr4 10454772 10454943 -173833719 + AluSg/x SINE Alu 132 304 -6 197 33 33 0 chr4 10454955 10454985 -173833677 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 9400 57 8 108 chr4 10454989 10456511 -173832151 - SVA Other Other -17 1369 1 493 287 105 29 chr4 10456695 10457113 -173831549 - L1MEd LINE L1 -5049 1070 621 308 144 51 42 chr4 10457278 10457396 -173831266 + (TG)n Simple_repeat Simple_repeat 2 120 0 1935 131 67 62 chr4 10457465 10457617 -173831045 + THE1C LTR MaLR 1 151 -224 2136 56 63 0 chr4 10457617 10457901 -173830761 - AluY SINE Alu -9 302 1 1935 131 67 62 chr4 10457901 10458121 -173830541 + THE1C LTR MaLR 151 375 0 991 301 100 30 chr4 10458273 10458744 -173829918 - MLT1J LTR MaLR -6 505 2 253 271 32 101 chr4 10458782 10458970 -173829692 - L1MEd LINE L1 -5934 185 11 229 323 141 0 chr4 10459969 10460068 -173828594 - MLT1J LTR MaLR -359 152 40 246 318 94 40 chr4 10460789 10460990 -173827672 - MIR SINE MIR -15 247 36 249 253 154 62 chr4 10461013 10461175 -173827487 - MIR3 SINE MIR -21 187 11 288 311 0 0 chr4 10461251 10461325 -173827337 - LTR16C LTR ERVL 0 491 418 331 248 109 0 chr4 10461390 10461491 -173827171 - LTR16C LTR ERVL -178 313 202 189 317 173 36 chr4 10461568 10461817 -173826845 + L2 LINE L2 3019 3301 -12 231 302 155 9 chr4 10462101 10462217 -173826445 - L2 LINE L2 -16 3256 3124 195 228 18 18 chr4 10462430 10462487 -173826175 + MIR SINE MIR 70 126 -136 218 267 105 87 chr4 10462769 10462941 -173825721 + L2 LINE L2 3062 3236 -36 582 239 161 63 chr4 10464946 10465201 -173823461 + MER58B DNA MER1_type 62 341 0 591 189 26 13 chr4 10467069 10467298 -173821364 + (TCCA)n Simple_repeat Simple_repeat 1 232 0 297 132 26 26 chr4 10467341 10467417 -173821245 + (TCCA)n Simple_repeat Simple_repeat 2 77 0 776 163 17 6 chr4 10467429 10467607 -173821055 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 629 134 28 34 chr4 10467647 10467826 -173820836 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 851 133 17 17 chr4 10467864 10468044 -173820618 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 581 165 28 23 chr4 10468089 10468265 -173820397 + (TCCA)n Simple_repeat Simple_repeat 4 180 0 602 203 25 0 chr4 10468317 10468480 -173820182 + (TCCA)n Simple_repeat Simple_repeat 3 169 0 282 305 48 0 chr4 10468484 10468589 -173820073 - L2 LINE L2 -5 3308 3199 209 260 40 0 chr4 10468606 10468656 -173820006 + MER91A DNA MER1_type 19 70 -126 494 160 34 117 chr4 10469167 10469373 -173819289 + MER53 DNA DNA 1 189 0 762 146 35 0 chr4 10469602 10469773 -173818889 + (TCCA)n Simple_repeat Simple_repeat 2 178 0 300 235 18 24 chr4 10470437 10470603 -173818059 + (TCCA)n Simple_repeat Simple_repeat 4 168 0 183 80 0 0 chr4 10470657 10470682 -173817980 + (CCCA)n Simple_repeat Simple_repeat 3 27 0 330 345 61 39 chr4 10470704 10471014 -173817648 - L2 LINE L2 -1 3271 2955 240 337 30 10 chr4 10471036 10471137 -173817525 + MIR SINE MIR 47 149 -113 446 329 162 22 chr4 10471269 10472140 -173816522 + L2 LINE L2 2174 3203 -110 255 31 0 0 chr4 10472140 10472172 -173816490 + (CA)n Simple_repeat Simple_repeat 2 33 0 446 329 162 22 chr4 10472172 10472271 -173816391 + L2 LINE L2 3203 3287 -26 495 89 0 33 chr4 10473298 10473388 -173815274 + (TCC)n Simple_repeat Simple_repeat 3 89 0 409 292 34 34 chr4 10473712 10473890 -173814772 - LTR16A1 LTR ERVL -218 239 62 873 161 3 0 chr4 10474605 10474898 -173813764 + (TG)n Simple_repeat Simple_repeat 1 294 0 253 146 0 0 chr4 10475707 10475748 -173812914 + L3 LINE CR1 1425 1465 -112 200 275 14 0 chr4 10476704 10476773 -173811889 + L2 LINE L2 2015 2084 -1230 202 295 63 11 chr4 10477059 10477154 -173811508 + L2 LINE L2 3160 3259 -54 350 271 120 30 chr4 10477280 10477413 -173811249 + MIR SINE MIR 108 252 -10 402 313 53 48 chr4 10478588 10478796 -173809866 + MIR SINE MIR 36 244 -18 389 259 6 0 chr4 10478980 10479138 -173809524 + GA-rich Low_complexity Low_complexity 1 159 0 1688 141 0 28 chr4 10479159 10479450 -173809212 + AluJo SINE Alu 1 283 -29 521 103 0 0 chr4 10479382 10479450 -173809212 + AluJ/FRAM SINE Alu 216 320 0 279 0 54 0 chr4 10479450 10479487 -173809175 + (TAAA)n Simple_repeat Simple_repeat 2 180 0 328 294 32 97 chr4 10479693 10479852 -173808810 - L1ME4a LINE L1 -23 6098 5870 271 273 0 23 chr4 10479852 10479940 -173808722 + (TATG)n Simple_repeat Simple_repeat 3 88 0 328 294 32 97 chr4 10479940 10479972 -173808690 - L1ME4a LINE L1 -251 5870 5838 344 313 62 58 chr4 10479972 10480180 -173808482 + L2 LINE L2 3104 3312 -1 1925 150 3 0 chr4 10480281 10480587 -173808075 - AluJb SINE Alu -5 307 1 255 31 0 0 chr4 10481484 10481516 -173807146 + (CAGAA)n Simple_repeat Simple_repeat 5 36 0 2254 72 10 0 chr4 10481543 10481836 -173806826 + AluY SINE Alu 1 296 -15 252 253 120 0 chr4 10481896 10481971 -173806691 - L2 LINE L2 -25 3288 3205 615 231 18 1 chr4 10482014 10482199 -173806463 + L1MB4 LINE L1 5992 6180 0 500 172 35 132 chr4 10482383 10482557 -173806105 + L1MA7 LINE L1 6133 6289 -2 32 0 0 0 chr4 10482557 10482589 -173806073 + AT_rich Low_complexity Low_complexity 1 32 0 443 374 75 19 chr4 10482865 10483397 -173805265 + L2 LINE L2 2092 2653 -661 210 118 0 0 chr4 10484335 10484369 -173804293 + (T)n Simple_repeat Simple_repeat 1 34 0 299 316 73 7 chr4 10485320 10485456 -173803206 + MIR SINE MIR 81 225 -37 275 286 95 24 chr4 10486168 10486294 -173802368 - L2 LINE L2 -179 3093 2959 365 263 29 36 chr4 10486637 10486774 -173801888 + L2 LINE L2 2921 3056 -216 2084 112 10 0 chr4 10487395 10487691 -173800971 + AluSx SINE Alu 1 299 -13 2393 260 92 4 chr4 10487708 10488486 -173800176 + L1MC3 LINE L1 6869 7715 -70 263 263 222 0 chr4 10488536 10488635 -173800027 + MIR SINE MIR 14 134 -128 335 136 0 45 chr4 10488641 10488707 -173799955 + L1MD3 LINE L1 7920 7982 -13 195 209 47 0 chr4 10489482 10489525 -173799137 + MIR SINE MIR 14 58 -204 312 127 0 0 chr4 10489665 10489720 -173798942 + (TGAA)n Simple_repeat Simple_repeat 2 56 0 1096 262 77 25 chr4 10490083 10490522 -173798140 - MLT1C LTR MaLR 0 467 6 251 366 58 31 chr4 10490678 10490902 -173797760 + L2 LINE L2 3084 3313 0 318 98 0 0 chr4 10490999 10491050 -173797612 + (TGAA)n Simple_repeat Simple_repeat 4 54 0 596 271 81 9 chr4 10492449 10492670 -173795992 - MLT1D LTR MaLR -8 497 261 234 248 0 0 chr4 10492716 10492825 -173795837 + (TG)n Simple_repeat Simple_repeat 1 109 0 432 233 0 0 chr4 10492843 10493015 -173795647 + (TG)n Simple_repeat Simple_repeat 2 173 0 360 244 0 0 chr4 10493050 10493230 -173795432 + (TG)n Simple_repeat Simple_repeat 1 180 0 198 241 0 0 chr4 10493291 10493378 -173795284 + (TG)n Simple_repeat Simple_repeat 1 87 0 347 247 6 0 chr4 10493431 10493589 -173795073 + (TG)n Simple_repeat Simple_repeat 1 159 0 474 228 0 0 chr4 10493608 10493846 -173794816 + (TG)n Simple_repeat Simple_repeat 1 238 0 481 268 39 22 chr4 10493852 10494031 -173794631 - MLT1D LTR MaLR -308 197 16 303 308 154 0 chr4 10494088 10494283 -173794379 - LTR33 LTR ERVL -247 274 50 1887 132 66 44 chr4 10494474 10494839 -173793823 - THE1C LTR MaLR -2 373 1 234 231 0 31 chr4 10494899 10494964 -173793698 + L2 LINE L2 3157 3219 -53 1113 109 17 19 chr4 10495000 10495358 -173793304 + (TGGA)n Simple_repeat Simple_repeat 1 358 0 250 217 12 24 chr4 10496201 10496284 -173792378 - MLT1H LTR MaLR -357 192 111 261 279 70 0 chr4 10496831 10496917 -173791745 - L2 LINE L2 -188 3084 2993 376 250 58 17 chr4 10498662 10498782 -173789880 + MIR SINE MIR 80 204 -58 207 88 0 0 chr4 10498784 10498818 -173789844 + (TG)n Simple_repeat Simple_repeat 1 34 0 299 278 216 0 chr4 10498947 10499044 -173789618 - L2 LINE L2 -14 3299 3182 476 274 0 0 chr4 10499194 10499318 -173789344 + MER58B DNA MER1_type 218 341 0 859 148 77 0 chr4 10499631 10499800 -173788862 + MLT1B LTR MaLR 8 189 -201 773 153 0 8 chr4 10499833 10499957 -173788705 + FRAM SINE Alu 49 171 -5 805 194 70 0 chr4 10499961 10500147 -173788515 + MLT1B LTR MaLR 192 390 0 270 221 63 32 chr4 10500365 10500460 -173788202 - L2 LINE L2 -258 3014 2917 240 35 0 0 chr4 10501491 10501520 -173787142 + (GGA)n Simple_repeat Simple_repeat 2 30 0 361 218 129 0 chr4 10501786 10501887 -173786775 - L2 LINE L2 -16 3297 3184 224 267 134 62 chr4 10502406 10502695 -173785967 - L2 LINE L2 -188 3084 2771 248 365 21 0 chr4 10503481 10503577 -173785085 + MIR SINE MIR 85 182 -80 187 303 97 28 chr4 10503663 10503808 -173784854 - MIR SINE MIR -21 241 87 242 225 144 9 chr4 10503907 10504018 -173784644 - MIR SINE MIR -64 144 19 492 32 0 0 chr4 10504018 10504080 -173784582 + (CAGCC)n Simple_repeat Simple_repeat 4 65 0 1776 191 70 5 chr4 10504821 10505220 -173783442 - LTR32 LTR ERVL 0 471 47 347 237 0 3 chr4 10506138 10506296 -173782366 - MER45C DNA AcHobo 0 953 756 647 255 165 48 chr4 10506302 10506553 -173782109 - MER45C DNA AcHobo -533 420 109 2228 89 3 0 chr4 10506553 10506845 -173781817 - AluSp SINE Alu -20 293 1 647 255 165 48 chr4 10506845 10506969 -173781693 - MER45C DNA AcHobo -844 109 1 225 0 0 0 chr4 10508505 10508530 -173780132 + (CA)n Simple_repeat Simple_repeat 2 26 0 349 275 28 0 chr4 10508672 10508781 -173779881 - MER45C DNA AcHobo -759 194 83 574 214 6 16 chr4 10510604 10510786 -173777876 + (TGAG)n Simple_repeat Simple_repeat 1 180 0 298 183 33 0 chr4 10510788 10510848 -173777814 + (TGAA)n Simple_repeat Simple_repeat 3 64 0 1038 151 1 6 chr4 10510848 10511650 -173777012 + (TGAG)n Simple_repeat Simple_repeat 1 797 0 204 40 0 0 chr4 10512579 10512604 -173776058 + (A)n Simple_repeat Simple_repeat 1 25 0 368 286 119 24 chr4 10513213 10513423 -173775239 + MIR SINE MIR 31 260 -2 272 345 37 15 chr4 10513881 10514050 -173774612 + MIR SINE MIR 3 172 -68 391 288 22 66 chr4 10514241 10514442 -173774220 + MIR3 SINE MIR 15 206 -56 182 61 0 30 chr4 10515518 10515551 -173773111 + (CCCCCA)n Simple_repeat Simple_repeat 4 35 0 395 277 31 15 chr4 10516003 10516133 -173772529 - MER63A DNA MER1_type -26 184 53 981 144 0 0 chr4 10516228 10516272 -173772390 + (TGAG)n Simple_repeat Simple_repeat 1 218 0 981 144 0 0 chr4 10516272 10516446 -173772216 + (TGAG)n Simple_repeat Simple_repeat 4 177 0 1071 102 17 0 chr4 10516476 10516653 -173772009 + (TGAG)n Simple_repeat Simple_repeat 1 180 0 321 89 0 0 chr4 10517011 10517056 -173771606 + (GGA)n Simple_repeat Simple_repeat 3 47 0 464 371 125 0 chr4 10518197 10518477 -173770185 - L3 LINE CR1 -33 1544 1230 360 274 75 52 chr4 10518654 10518906 -173769756 + L2 LINE L2 2842 3099 -173 1261 246 62 42 chr4 10519149 10519646 -173769016 - MER90 LTR ERV1 0 614 108 310 313 0 0 chr4 10520943 10521023 -173767639 + L2 LINE L2 3211 3290 -23 331 330 19 0 chr4 10521138 10521241 -173767421 - MIR SINE MIR -111 151 47 264 349 28 94 chr4 10521349 10521784 -173766878 - L2 LINE L2 -1 3312 2907 305 307 93 29 chr4 10523129 10523409 -173765253 - L1ME4a LINE L1 -230 5891 5594 300 422 12 12 chr4 10523479 10523640 -173765022 - L1ME4a LINE L1 -637 5484 5324 6141 180 50 43 chr4 10523817 10525244 -173763418 + L1M4c LINE L1 1 1442 -4942 2173 117 3 0 chr4 10525244 10525544 -173763118 - AluSx SINE Alu -10 302 2 6141 180 50 43 chr4 10525544 10525702 -173762960 + L1M4c LINE L1 1442 1597 -4787 474 320 10 10 chr4 10526000 10526194 -173762468 + MLT1J LTR MaLR 23 216 -295 553 345 93 13 chr4 10526461 10526849 -173761813 + L1ME4a LINE L1 5478 5896 -225 2425 59 20 3 chr4 10527600 10527906 -173760756 + AluY SINE Alu 1 311 0 191 323 16 0 chr4 10528859 10528921 -173759741 + L2 LINE L2 3249 3311 -2 450 219 21 20 chr4 10529113 10529244 -173759418 - MIR SINE MIR -43 165 33 227 255 0 0 chr4 10529570 10529621 -173759041 + C-rich Low_complexity Low_complexity 4 54 0 667 175 267 0 chr4 10529641 10529858 -173758804 - MER58 DNA MER1_type 0 2420 2146 227 243 0 27 chr4 10529934 10530045 -173758617 + CT-rich Low_complexity Low_complexity 1 108 0 504 196 0 30 chr4 10530099 10530267 -173758395 + CT-rich Low_complexity Low_complexity 1 163 0 195 214 0 0 chr4 10530321 10530391 -173758271 + CT-rich Low_complexity Low_complexity 2 71 0 287 304 35 17 chr4 10530688 10530803 -173757859 - MIR SINE MIR -70 138 22 453 244 17 9 chr4 10531708 10531823 -173756839 + MIR SINE MIR 6 121 -141 693 298 48 4 chr4 10532073 10532301 -173756361 + MIR SINE MIR 6 243 -19 655 251 184 43 chr4 10532639 10533058 -173755604 + MLT1D LTR MaLR 3 480 -25 530 241 60 79 chr4 10534199 10534464 -173754198 + MLT1D-int LTR MaLR 1112 1371 0 1788 212 37 33 chr4 10534475 10534966 -173753696 + MLT1D LTR MaLR 12 504 -1 251 193 96 36 chr4 10535026 10535109 -173753553 + MIR SINE MIR 174 261 -1 201 224 41 0 chr4 10535124 10535173 -173753489 + MIR SINE MIR 78 128 -134 378 209 180 57 chr4 10536415 10536626 -173752036 - MLT1H LTR MaLR -14 535 299 404 288 103 32 chr4 10536632 10536913 -173751749 - MLT1H LTR MaLR -102 447 147 221 282 18 3 chr4 10537005 10537073 -173751589 - MIR SINE MIR -119 89 21 230 359 127 0 chr4 10537518 10537660 -173751002 + MIR SINE MIR 77 236 -26 243 358 8 8 chr4 10537699 10537819 -173750843 + L2 LINE L2 2933 3052 -220 270 279 0 0 chr4 10537904 10537965 -173750697 + MIR SINE MIR 110 170 -92 359 297 27 18 chr4 10537965 10538076 -173750586 - L2 LINE L2 -1 3312 3201 2233 104 7 0 chr4 10538693 10538992 -173749670 + AluSx SINE Alu 1 301 -11 341 242 87 27 chr4 10539182 10539331 -173749331 - L1ME4a LINE L1 -12 6109 5952 938 214 45 15 chr4 10541014 10541280 -173747382 - L1MB7 LINE L1 -9 6175 5902 234 261 0 0 chr4 10541574 10541620 -173747042 - MIR SINE MIR -106 156 111 348 314 42 0 chr4 10541829 10541947 -173746715 - MIR SINE MIR -90 172 50 606 158 40 0 chr4 10543104 10543336 -173745326 + (TGGA)n Simple_repeat Simple_repeat 1 241 0 715 164 29 0 chr4 10543361 10543532 -173745130 + (TGGA)n Simple_repeat Simple_repeat 3 178 0 535 156 50 0 chr4 10543557 10543717 -173744945 + (TGGA)n Simple_repeat Simple_repeat 3 170 0 776 145 36 16 chr4 10543737 10544045 -173744617 + (TGGA)n Simple_repeat Simple_repeat 1 314 0 228 317 37 0 chr4 10544532 10544614 -173744048 + L2 LINE L2 3188 3272 0 332 262 58 9 chr4 10545664 10545774 -173742888 + MIR3 SINE MIR 58 174 -53 212 341 171 43 chr4 10545843 10546142 -173742520 - L2 LINE L2 -23 3249 2913 299 226 66 47 chr4 10547608 10547714 -173740948 + MIR3 SINE MIR 101 208 0 201 278 19 0 chr4 10548006 10548060 -173740602 - L2 LINE L2 -1 3271 3217 307 371 111 22 chr4 10548069 10548430 -173740232 + L2 LINE L2 2877 3269 -3 1080 128 0 0 chr4 10548509 10548739 -173739923 + (TGGA)n Simple_repeat Simple_repeat 1 230 0 981 142 0 0 chr4 10548741 10548910 -173739752 + (TGGG)n Simple_repeat Simple_repeat 2 170 0 1386 68 0 0 chr4 10548911 10549318 -173739344 + (TGGA)n Simple_repeat Simple_repeat 1 585 0 264 260 55 0 chr4 10549784 10549857 -173738805 + MIR3 SINE MIR 115 191 -17 192 300 0 33 chr4 10553102 10553162 -173735500 - L3 LINE CR1 -110 1467 1410 195 238 79 16 chr4 10553877 10553940 -173734722 - L3 LINE CR1 -543 1034 968 339 200 88 0 chr4 10554200 10554280 -173734382 + MIR SINE MIR 66 152 -110 413 160 8 50 chr4 10554484 10554603 -173734059 + GA-rich Low_complexity Low_complexity 2 115 0 202 309 82 0 chr4 10554797 10554907 -173733755 - L2 LINE L2 -461 2853 2735 316 232 24 0 chr4 10555721 10555803 -173732859 + MIR SINE MIR 61 144 -118 434 275 186 36 chr4 10555968 10556215 -173732447 - L2 LINE L2 0 3272 2989 197 181 28 56 chr4 10556880 10556952 -173731710 - L2 LINE L2 -176 3096 3027 835 255 115 23 chr4 10558321 10558732 -173729930 + MLT1C LTR MaLR 40 488 -17 362 168 0 70 chr4 10559331 10559516 -173729146 + (GGCTG)n Simple_repeat Simple_repeat 2 173 0 433 150 0 70 chr4 10559588 10559775 -173728887 + (GGCTG)n Simple_repeat Simple_repeat 2 175 0 369 174 0 65 chr4 10559874 10560154 -173728508 + (GGCTG)n Simple_repeat Simple_repeat 1 261 0 217 339 0 0 chr4 10560289 10560351 -173728311 - MIR SINE MIR -55 153 92 354 344 33 0 chr4 10560470 10560592 -173728070 - L2 LINE L2 -6 3307 3182 272 278 52 61 chr4 10560957 10561072 -173727590 + L2 LINE L2 3200 3313 0 240 217 83 75 chr4 10563524 10563644 -173725018 + MIR SINE MIR 25 145 -117 453 149 0 0 chr4 10565017 10565091 -173723571 + MIR SINE MIR 71 144 -118 523 273 40 48 chr4 10566399 10566648 -173722014 - MER46C DNA MER2_type -2 336 90 950 177 89 7 chr4 10566722 10567090 -173721572 - MER31A LTR ERV1 -7 478 27 243 241 17 0 chr4 10567383 10567441 -173721221 + MIR SINE MIR 87 145 -63 688 206 265 5 chr4 10567687 10567906 -173720756 - MLT1F1 LTR MaLR -285 282 7 365 306 106 6 chr4 10569085 10569245 -173719417 + L2 LINE L2 2994 3169 -103 845 197 17 7 chr4 10569614 10570037 -173718625 + (TCCA)n Simple_repeat Simple_repeat 1 427 0 281 293 213 32 chr4 10570446 10570794 -173717868 + L2 LINE L2 2859 3269 -3 229 327 52 59 chr4 10570810 10570963 -173717699 - MIR3 SINE MIR -45 163 12 239 156 39 0 chr4 10571095 10571152 -173717510 + MIR SINE MIR 99 157 -62 343 244 62 31 chr4 10572044 10572237 -173716425 - L1ME4a LINE L1 -1 6120 5922 393 285 54 8 chr4 10572629 10572799 -173715863 - MIR3 SINE MIR -46 162 37 228 122 0 0 chr4 10573333 10573374 -173715288 + (CA)n Simple_repeat Simple_repeat 2 42 0 3165 234 71 40 chr4 10573527 10574485 -173714177 + L1MD1 LINE L1 4813 5831 -411 2020 132 0 3 chr4 10574485 10574781 -173713881 + AluSx SINE Alu 1 295 -17 3165 234 71 40 chr4 10574781 10575201 -173713461 + L1MD1 LINE L1 5831 6237 -5 238 284 82 8 chr4 10575233 10575367 -173713295 + L1ME4a LINE L1 5978 6121 0 188 182 0 0 chr4 10575669 10575702 -173712960 + MIR SINE MIR 117 149 -113 884 188 152 25 chr4 10575783 10576059 -173712603 - MLT1C LTR MaLR -140 327 17 213 213 0 0 chr4 10576239 10576286 -173712376 + GA-rich Low_complexity Low_complexity 3 49 0 252 86 0 0 chr4 10576902 10576937 -173711725 + (TGAG)n Simple_repeat Simple_repeat 1 35 0 954 179 3 4 chr4 10577409 10578211 -173710451 + (TGG)n Simple_repeat Simple_repeat 1 801 0 704 144 0 8 chr4 10578226 10578358 -173710304 + (TGG)n Simple_repeat Simple_repeat 1 131 0 218 350 21 43 chr4 10578912 10579052 -173709610 - L2 LINE L2 -453 2861 2725 248 318 37 17 chr4 10579227 10579358 -173709304 + MIR3 SINE MIR 15 147 -74 1502 127 5 9 chr4 10579656 10579899 -173708763 + AluSg SINE Alu 62 303 0 333 197 82 0 chr4 10580350 10580440 -173708222 + MIR SINE MIR 64 160 -64 231 180 20 40 chr4 10581034 10581084 -173707578 - MIR SINE MIR -56 152 104 182 359 98 0 chr4 10581128 10581220 -173707442 - L2 LINE L2 -34 3238 3138 261 278 41 10 chr4 10583269 10583366 -173705296 - MLT1J1 LTR MaLR -303 143 44 2817 191 69 1 chr4 10583527 10584183 -173704479 + L1MB7 LINE L1 5444 6143 -41 4449 188 21 40 chr4 10584389 10585606 -173703056 + L1M2 LINE L1 4315 5501 -744 210 345 109 24 chr4 10585946 10586111 -173702551 + L2 LINE L2 3030 3208 -64 248 298 20 57 chr4 10586146 10586268 -173702394 - MIR SINE MIR -70 138 35 414 230 20 1 chr4 10587983 10588095 -173700567 - MIR SINE MIR -63 145 33 277 360 9 9 chr4 10588827 10588938 -173699724 - L2 LINE L2 -196 3076 2966 205 383 145 9 chr4 10588950 10589164 -173699498 + L2 LINE L2 2260 2502 -812 211 307 13 0 chr4 10589176 10589251 -173699411 - MIR SINE MIR -177 85 10 209 326 12 0 chr4 10589712 10589779 -173698883 + MIR SINE MIR 74 145 -63 195 235 226 17 chr4 10590095 10590210 -173698452 - L2 LINE L2 -120 3152 3014 647 251 165 56 chr4 10590995 10591426 -173697236 - MLT1G3 LTR MaLR -3 539 92 182 253 39 54 chr4 10591461 10591569 -173697093 - MIR SINE MIR -64 144 50 254 254 74 96 chr4 10591600 10591801 -173696861 - MIR SINE MIR -35 227 19 182 323 0 16 chr4 10592016 10592078 -173696584 - MIR SINE MIR -109 153 93 346 339 119 0 chr4 10592312 10592489 -173696173 - MIR SINE MIR -14 248 51 218 204 0 0 chr4 10592866 10592910 -173695752 - MIR SINE MIR -61 147 104 353 240 156 7 chr4 10594540 10594694 -173693968 - MIR3 SINE MIR -15 193 17 216 0 0 0 chr4 10596679 10596703 -173691959 + (GA)n Simple_repeat Simple_repeat 2 25 0 408 88 0 0 chr4 10597097 10597154 -173691508 + (CA)n Simple_repeat Simple_repeat 1 57 0 184 311 27 0 chr4 10597242 10597316 -173691346 - L2 LINE L2 -38 3275 3200 1230 264 89 12 chr4 10598770 10599263 -173689399 + MER90 LTR ERV1 84 614 0 433 340 20 40 chr4 10600502 10600752 -173687910 - L2 LINE L2 -825 2489 2245 960 286 92 65 chr4 10600893 10601600 -173687062 - L2 LINE L2 -1449 1865 1140 2412 47 3 10 chr4 10602621 10602920 -173685742 + AluY SINE Alu 1 297 -14 232 270 58 44 chr4 10603159 10603296 -173685366 + HAL1b LINE L1 315 453 -895 1782 318 73 44 chr4 10604284 10604720 -173683942 - ERVL LTR ERVL -2930 2834 2412 2263 115 144 3 chr4 10604720 10605095 -173683567 - MSTA LTR MaLR 0 428 1 1782 318 73 44 chr4 10605095 10605927 -173682735 - ERVL LTR ERVL -3352 2412 1529 2208 68 10 0 chr4 10606417 10606709 -173681953 + AluSq SINE Alu 1 295 -18 212 289 0 0 chr4 10606731 10606783 -173681879 + MIR SINE MIR 189 240 -22 2680 93 8 3 chr4 10607186 10607539 -173681123 + THE1A LTR MaLR 1 355 0 243 240 0 0 chr4 10609198 10609248 -173679414 + L2 LINE L2 3223 3272 0 1362 238 57 59 chr4 10610245 10610774 -173677888 - MER74A LTR ERVL -1 557 30 351 296 106 8 chr4 10611669 10611801 -173676861 + L2 LINE L2 3125 3269 -3 22 0 0 0 chr4 10616321 10616343 -173672319 + AT_rich Low_complexity Low_complexity 1 22 0 1174 240 50 8 chr4 10617201 10617560 -173671102 + L1MB3 LINE L1 5592 5965 -218 755 151 0 43 chr4 10617561 10617700 -173670962 + FLAM_C SINE Alu 1 133 -10 940 149 0 0 chr4 10617742 10617890 -173670772 + L1MB3 LINE L1 6036 6183 0 198 298 125 39 chr4 10618031 10618135 -173670527 - MIR SINE MIR -37 225 113 1755 132 7 15 chr4 10618135 10618408 -173670254 + AluJo SINE Alu 14 284 -28 223 251 194 52 chr4 10619008 10619211 -173669451 + MIR SINE MIR 1 227 -35 1719 163 24 7 chr4 10621100 10621389 -173667273 + AluJb SINE Alu 1 294 -18 280 283 78 56 chr4 10621773 10621953 -173666709 - MIR3 SINE MIR -7 201 18 192 328 102 55 chr4 10623520 10623971 -173664691 - L2 LINE L2 -1229 2085 1614 423 294 128 11 chr4 10624347 10624527 -173664135 + L2 LINE L2 3082 3282 -31 407 219 12 0 chr4 10624541 10624623 -173664039 + FLAM_A SINE Alu 1 83 -59 223 273 38 15 chr4 10624634 10624766 -173663896 + (TA)n Simple_repeat Simple_repeat 1 135 0 191 280 160 0 chr4 10624902 10624977 -173663685 - MIR SINE MIR -79 183 97 182 376 82 0 chr4 10625704 10625789 -173662873 + L2 LINE L2 3204 3295 -18 680 133 9 0 chr4 10826559 10826664 -173461998 + AluJo/FRAM SINE Alu 187 292 -20 365 206 10 20 chr4 10826675 10826777 -173461885 + L1MC/D LINE L1 4926 5026 -1120 2589 185 61 3 chr4 10826779 10827375 -173461287 + L1MC/D LINE L1 5191 5814 -428 873 259 119 55 chr4 10827789 10827980 -173460682 - MLT1F1 LTR MaLR -74 519 342 1887 194 36 12 chr4 10827980 10828398 -173460264 - MSTA LTR MaLR 0 428 1 873 259 119 55 chr4 10828398 10828667 -173459995 - MLT1F1 LTR MaLR -251 342 1 1839 171 0 13 chr4 10828701 10829017 -173459645 + AluJb SINE Alu 1 312 0 1286 133 0 0 chr4 10829028 10829201 -173459461 + AluSg SINE Alu 1 173 -137 230 348 35 7 chr4 10829671 10829812 -173458850 + L3 LINE CR1 1229 1373 -204 2122 138 3 0 chr4 10829872 10830162 -173458500 - AluJb SINE Alu -21 291 1 269 123 5 0 chr4 10830243 10830292 -173458370 - MLT2C1 LTR ERVL -2 395 358 1005 145 0 0 chr4 10830308 10830487 -173458175 + (TGGA)n Simple_repeat Simple_repeat 2 180 0 531 253 188 5 chr4 10830630 10830832 -173457830 - MIR SINE MIR -1 261 23 507 281 98 12 chr4 10831196 10831360 -173457302 - MER5B DNA MER1_type 0 178 1 240 239 30 30 chr4 10831741 10831808 -173456854 + MIR SINE MIR 16 82 -126 1673 167 7 4 chr4 10833194 10833464 -173455198 + AluJo SINE Alu 33 303 -9 232 254 0 28 chr4 10833468 10833539 -173455123 - MER112 DNA MER1_type -121 139 71 887 89 35 84 chr4 10833933 10834111 -173454551 - L1MA5A LINE L1 -3 6294 6126 2413 90 0 0 chr4 10834111 10834410 -173454252 - AluSx SINE Alu -13 299 1 887 89 35 84 chr4 10834410 10834433 -173454229 - L1MA5A LINE L1 -171 6126 6103 2162 156 32 0 chr4 10834433 10834804 -173453858 - L1MA5A LINE L1 -363 5934 5549 1926 124 20 20 chr4 10834806 10835104 -173453558 - AluSq SINE Alu -15 298 1 994 104 8 0 chr4 10835104 10835238 -173453424 - AluSq/x SINE Alu -178 135 1 458 139 0 12 chr4 10835239 10835325 -173453337 - L1MA5A LINE L1 -737 5563 5479 360 315 145 13 chr4 10835628 10835725 -173452937 + L3 LINE CR1 1234 1317 -260 2005 157 0 28 chr4 10835725 10836044 -173452618 + AluJo SINE Alu 1 310 -2 360 315 145 13 chr4 10836044 10836181 -173452481 + L3 LINE CR1 1317 1499 -78 943 226 62 28 chr4 10836587 10836875 -173451787 + MER63B DNA MER1_type 39 336 -100 29 0 0 0 chr4 10836875 10836904 -173451758 + AT_rich Low_complexity Low_complexity 1 29 0 2204 110 4 0 chr4 10836912 10837226 -173451436 + AluSp SINE Alu 1 315 0 251 183 12 0 chr4 10837227 10837309 -173451353 + (TA)n Simple_repeat Simple_repeat 1 83 0 1832 174 3 0 chr4 10837316 10837610 -173451052 - AluJo SINE Alu -17 295 1 454 206 23 30 chr4 10837616 10837747 -173450915 + MER63B DNA MER1_type 304 433 -2 1462 140 34 45 chr4 10837987 10838279 -173450383 + THE1C LTR MaLR 87 375 0 218 259 0 12 chr4 10838279 10838364 -173450298 + (CA)n Simple_repeat Simple_repeat 1 84 0 2052 113 3 3 chr4 10838427 10838747 -173449915 + AluSx SINE Alu 1 320 0 307 307 106 30 chr4 10838764 10839028 -173449634 + L1ME4a LINE L1 5837 6120 -1 1759 120 76 10 chr4 10840354 10840655 -173448007 + LTR24C LTR ERV1 1 321 -314 430 317 158 19 chr4 10840661 10840983 -173447679 + MLT1K LTR MaLR 110 476 -112 437 146 10 87 chr4 10841008 10841111 -173447551 + MER4D LTR ERV1 1 95 -808 207 0 0 0 chr4 10841211 10841234 -173447428 + (A)n Simple_repeat Simple_repeat 1 23 0 1860 154 13 35 chr4 10841312 10841624 -173447038 + AluSx SINE Alu 5 309 -3 1019 175 82 39 chr4 10841797 10841929 -173446733 + AluJo SINE Alu 1 147 -165 2369 113 0 0 chr4 10841929 10842240 -173446422 + AluSx SINE Alu 1 311 -1 1019 175 82 39 chr4 10842240 10842313 -173446349 + AluJo SINE Alu 147 215 -97 284 367 11 0 chr4 10842313 10842403 -173446259 - LTR16C LTR ERVL -287 204 114 224 285 86 99 chr4 10842555 10842927 -173445735 + L2 LINE L2 2858 3224 -48 2494 137 23 44 chr4 10842947 10843420 -173445242 - LTR24 LTR ERV1 0 467 5 266 247 206 16 chr4 10843469 10843663 -173444999 - L2 LINE L2 -235 3037 2807 2436 94 3 0 chr4 10844715 10845023 -173443639 + AluSx SINE Alu 1 309 -3 1326 209 38 59 chr4 10845081 10845454 -173443208 + MER47A DNA MER2_type 1 365 -1 441 230 27 61 chr4 10845459 10845607 -173443055 - L2 LINE L2 -18 3295 3153 2287 77 38 0 chr4 10847243 10847530 -173441132 + AluSc SINE Alu 1 298 -11 1775 176 6 38 chr4 10848101 10848419 -173440243 + AluJo SINE Alu 1 308 -4 1404 208 32 45 chr4 10848666 10848875 -173439787 - MLT1A2 LTR MaLR 0 374 171 2190 111 42 0 chr4 10848875 10849164 -173439498 - AluSc SINE Alu -8 301 1 1404 208 32 45 chr4 10849164 10849333 -173439329 - MLT1A2 LTR MaLR -203 171 1 210 254 0 17 chr4 10849603 10849662 -173439000 + MIR3 SINE MIR 123 180 -28 1575 199 95 34 chr4 10850040 10850564 -173438098 + MER89 LTR ERV1 1 556 -3 1023 121 0 0 chr4 10850830 10850962 -173437700 + AluSp SINE Alu 1 132 -181 2033 111 7 0 chr4 10850964 10851235 -173437427 + AluSp SINE Alu 1 273 -40 2002 95 0 0 chr4 10851335 10851578 -173437084 - AluSq SINE Alu -70 243 1 189 107 0 0 chr4 10851633 10851661 -173437001 + (TCC)n Simple_repeat Simple_repeat 2 29 0 854 296 21 8 chr4 10851677 10851920 -173436742 - MIR SINE MIR -6 256 11 275 337 32 4 chr4 10852008 10852131 -173436531 - MIR SINE MIR -65 143 20 1886 117 29 42 chr4 10852275 10852584 -173436078 - AluSx SINE Alu -7 305 1 531 69 0 0 chr4 10852639 10852711 -173435951 + (TGGA)n Simple_repeat Simple_repeat 1 72 0 217 299 26 26 chr4 10852771 10852848 -173435814 - MIR3 SINE MIR -31 177 101 2108 128 42 31 chr4 10853286 10853646 -173435016 - THE1B LTR MaLR 0 364 1 192 294 86 64 chr4 10854860 10855047 -173433615 - L2 LINE L2 -1262 2052 1862 225 263 0 18 chr4 10855242 10855299 -173433363 + GA-rich Low_complexity Low_complexity 1 56 0 365 314 190 0 chr4 10855385 10855611 -173433051 - L2 LINE L2 0 3313 3045 342 323 56 45 chr4 10855765 10856031 -173432631 - L2 LINE L2 -15 3257 2989 1973 128 6 38 chr4 10856054 10856373 -173432289 + AluSx SINE Alu 1 309 -3 324 308 121 5 chr4 10856376 10856569 -173432093 - MIR SINE MIR -11 251 34 687 177 18 0 chr4 10856745 10856909 -173431753 + (TCCA)n Simple_repeat Simple_repeat 1 167 0 383 176 24 0 chr4 10856974 10857059 -173431603 + (TCCA)n Simple_repeat Simple_repeat 4 90 0 209 270 16 0 chr4 10857094 10857157 -173431505 + (TCCA)n Simple_repeat Simple_repeat 2 65 0 318 325 53 18 chr4 10857189 10857303 -173431359 - L2 LINE L2 -22 3250 3133 180 343 0 14 chr4 10857378 10857448 -173431214 - L2 LINE L2 -3 3269 3201 2392 106 0 3 chr4 10857448 10857759 -173430903 - AluSx SINE Alu -2 310 1 231 183 267 0 chr4 10857811 10857871 -173430791 - MIR SINE MIR -62 146 71 189 147 0 0 chr4 10858685 10858719 -173429943 + (GGGAGA)n Simple_repeat Simple_repeat 3 36 0 180 125 0 0 chr4 10858720 10858752 -173429910 + (TG)n Simple_repeat Simple_repeat 1 32 0 266 274 65 40 chr4 10858825 10858949 -173429713 + L2 LINE L2 3187 3313 0 257 196 0 54 chr4 10859091 10859152 -173429510 + polypyrimidine Low_complexity Low_complexity 1 57 0 2326 109 7 0 chr4 10859152 10859456 -173429206 - AluSx SINE Alu -6 306 1 24 0 0 0 chr4 10860095 10860119 -173428543 + AT_rich Low_complexity Low_complexity 1 24 0 2484 83 3 10 chr4 10860265 10860579 -173428083 - AluSx SINE Alu 0 312 1 1912 134 28 3 chr4 10861516 10861823 -173426839 - AluSx SINE Alu 0 314 1 995 74 0 0 chr4 10862009 10862130 -173426532 + AluSc SINE Alu 175 295 -14 274 315 0 0 chr4 10862482 10862555 -173426107 + MIR3 SINE MIR 104 176 -32 253 200 33 33 chr4 10863043 10863103 -173425559 - MIR SINE MIR -67 141 82 1985 144 3 19 chr4 10864966 10865279 -173423383 - AluJb SINE Alu -4 308 1 368 274 96 7 chr4 10866807 10866942 -173421720 - L1MC/D LINE L1 -2211 5597 5451 2348 99 0 3 chr4 10866958 10867261 -173421401 + AluSx SINE Alu 1 302 -10 216 373 27 18 chr4 10867264 10867393 -173421269 - MIR SINE MIR -61 147 20 239 206 14 14 chr4 10867421 10867494 -173421168 + (TA)n Simple_repeat Simple_repeat 1 73 0 4638 67 18 6 chr4 10868178 10868808 -173419854 + L1PA10 LINE L1 5532 6168 0 286 262 49 31 chr4 10868833 10869035 -173419627 - ALR/Alpha Satellite centromeric 0 205 1 208 340 57 0 chr4 10870402 10870508 -173418154 + MIR SINE MIR 33 144 -64 279 310 90 7 chr4 10871018 10871173 -173417489 - L1ME4a LINE L1 -108 6013 5846 405 331 17 29 chr4 10871237 10871412 -173417250 - MIR SINE MIR -4 258 86 25 51 0 0 chr4 10872516 10872555 -173416107 + AT_rich Low_complexity Low_complexity 1 39 0 319 253 50 104 chr4 10872715 10872897 -173415765 - MIR SINE MIR -74 188 17 436 246 90 0 chr4 10872948 10873070 -173415592 - FLAM_A SINE Alu 0 133 1 544 126 39 19 chr4 10873071 10873174 -173415488 + L1M2 LINE L1 5337 5441 -856 2235 89 0 0 chr4 10873287 10873557 -173415105 - AluY SINE Alu -39 272 3 1737 155 73 9 chr4 10873562 10873903 -173414759 + MER4D LTR ERV1 541 903 0 266 224 92 13 chr4 10873903 10873965 -173414697 + MLT1K LTR MaLR 505 572 -16 190 0 0 0 chr4 10875018 10875039 -173413623 + (TTA)n Simple_repeat Simple_repeat 2 180 0 2101 90 11 0 chr4 10875039 10875319 -173413343 - AluSx SINE Alu -29 283 13 197 260 55 14 chr4 10878611 10878684 -173409978 - MIR3 SINE MIR -23 185 110 422 209 228 0 chr4 10878759 10878917 -173409745 + MER96B DNA MER1_type? 224 417 0 2099 112 7 0 chr4 10878991 10879287 -173409375 - AluSx SINE Alu -14 298 1 1656 175 20 3 chr4 10879297 10879594 -173409068 - AluJo SINE Alu -10 302 1 456 153 0 14 chr4 10879621 10879693 -173408969 - FLAM_A SINE Alu -25 117 47 776 199 0 6 chr4 10880132 10880313 -173408349 + CT-rich Low_complexity Low_complexity 1 180 0 1885 251 82 28 chr4 10880470 10881138 -173407524 - L1MC3 LINE L1 -190 7595 6892 210 219 62 0 chr4 10881958 10882022 -173406640 + MIR SINE MIR 65 132 -76 2194 96 6 13 chr4 10882145 10882458 -173406204 - AluSx SINE Alu -1 311 1 1576 194 20 0 chr4 10883231 10883530 -173405132 - AluJo SINE Alu -5 307 3 655 250 66 5 chr4 10883898 10884094 -173404568 - MLT1B LTR MaLR 0 390 183 517 219 52 24 chr4 10884249 10884427 -173404235 - MLT1B LTR MaLR -196 178 1 843 183 0 0 chr4 10885612 10885980 -173402682 + (CTCA)n Simple_repeat Simple_repeat 1 368 0 234 105 0 0 chr4 10886831 10886869 -173401793 + (A)n Simple_repeat Simple_repeat 1 38 0 604 288 59 5 chr4 10888808 10888983 -173399679 + MIR SINE MIR 13 204 -58 2211 80 3 10 chr4 10888983 10889283 -173399379 - AluSx SINE Alu -14 298 1 604 288 59 5 chr4 10889283 10889326 -173399336 + MIR SINE MIR 204 243 -19 256 111 37 74 chr4 10891495 10891603 -173397059 + (TGGG)n Simple_repeat Simple_repeat 3 106 0 338 350 97 14 chr4 10893058 10893275 -173395387 + MIR SINE MIR 16 250 -12 284 207 0 11 chr4 10893289 10893376 -173395286 + (CA)n Simple_repeat Simple_repeat 2 87 0 892 257 20 76 chr4 10893377 10893731 -173394931 + MER2 DNA MER2_type 5 338 -7 394 222 8 8 chr4 10893746 10893863 -173394799 + (CA)n Simple_repeat Simple_repeat 2 118 0 335 309 11 17