1992 145 26 83 chr2 0 56 -250687798 - L1MA5 LINE L1 -3 6297 6239 1653 120 13 0 chr2 56 281 -250687573 - AluSq SINE Alu -85 228 1 1992 145 26 83 chr2 281 345 -250687509 - L1MA5 LINE L1 -61 6239 6173 423 0 0 0 chr2 345 392 -250687462 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 1992 145 26 83 chr2 392 406 -250687448 - L1MA5 LINE L1 -127 6173 6160 1887 143 0 0 chr2 406 679 -250687175 - AluJb SINE Alu -28 284 12 1992 145 26 83 chr2 679 962 -250686892 - L1MA5 LINE L1 -140 6160 5902 1408 212 54 25 chr2 954 1282 -250686572 - L1M2 LINE L1 -4504 2345 2001 * 2186 72 0 0 chr2 1282 1545 -250686309 - AluY SINE Alu -48 263 1 1408 212 54 25 chr2 1545 1622 -250686232 - L1M2 LINE L1 -4848 2001 1928 780 195 0 0 chr2 1727 1855 -250685999 - FLAM_C SINE Alu -13 130 3 520 216 147 0 chr2 3471 3535 -250684319 - MER94 DNA DNA -1 133 80 2066 120 17 0 chr2 3535 3827 -250684027 - AluSx SINE Alu -15 297 1 520 216 147 0 chr2 3827 3878 -250683976 - MER94 DNA DNA -54 80 1 372 235 45 45 chr2 3884 4016 -250683838 + MIR3 SINE MIR 68 199 -9 31 0 0 0 chr2 8080 8111 -250679743 + AT_rich Low_complexity Low_complexity 1 31 0 196 321 46 18 chr2 8204 8313 -250679541 - L3b LINE CR1 -204 1379 1268 743 242 107 115 chr2 10223 10735 -250677119 + MLT1H LTR MaLR 42 549 0 2264 173 89 30 chr2 11097 11570 -250676284 + MLT1D LTR MaLR 5 505 0 377 270 59 26 chr2 11927 12079 -250675775 + MER67A LTR ERV1 387 543 0 1481 178 3 38 chr2 12760 13052 -250674802 - AluJo SINE Alu -18 294 13 273 322 16 16 chr2 13203 13324 -250674530 - MLT1H LTR MaLR -387 162 42 461 188 31 10 chr2 13659 13755 -250674099 + MER4A LTR ERV1 1 98 -566 1594 143 27 79 chr2 13755 14119 -250673735 + MER4A LTR ERV1 261 664 0 2696 118 3 6 chr2 15360 15725 -250672129 - THE1B LTR MaLR 0 364 1 11490 113 33 3 chr2 15725 17258 -250670596 - THE1B-int LTR MaLR 0 1580 1 2541 126 14 16 chr2 17258 17623 -250670231 - THE1B LTR MaLR 0 364 1 1844 135 0 82 chr2 18927 19246 -250668608 - MER4A LTR ERV1 0 664 372 264 263 197 0 chr2 19481 19618 -250668236 + MIR SINE MIR 32 195 -67 566 274 48 84 chr2 19894 20252 -250667602 - MLT1J1 LTR MaLR -37 409 65 286 309 40 24 chr2 21512 21638 -250666216 - L1ME3A LINE L1 -8 6162 6035 2071 231 57 19 chr2 21663 22186 -250665668 - MER90 LTR ERV1 0 614 72 200 295 90 41 chr2 23800 23922 -250663932 + MIR SINE MIR 20 147 -115 198 286 16 32 chr2 24001 24064 -250663790 + MIR3 SINE MIR 130 191 -17 197 275 0 0 chr2 24269 24309 -250663545 - L2 LINE L2 -14 3258 3219 * 239 313 153 14 chr2 24304 24448 -250663406 - MIR SINE MIR -93 169 6 1719 166 32 32 chr2 26067 26375 -250661479 + AluJo SINE Alu 1 308 -4 22 56 0 0 chr2 26456 26492 -250661362 + AT_rich Low_complexity Low_complexity 1 36 0 853 229 143 48 chr2 26493 26829 -250661025 - L1MC4 LINE L1 -437 7605 7238 1748 259 12 79 chr2 26831 27143 -250660711 - L1MC4a LINE L1 -803 7005 6674 1527 205 3 7 chr2 27143 27426 -250660428 + AluJo SINE Alu 1 282 -30 1748 259 12 79 chr2 27426 27533 -250660321 - L1MC4a LINE L1 -1134 6674 6635 342 0 0 0 chr2 27533 27571 -250660283 + (CA)n Simple_repeat Simple_repeat 2 39 0 1748 259 12 79 chr2 27571 27744 -250660110 - L1MC4a LINE L1 -1173 6635 6452 291 252 9 19 chr2 28247 28354 -250659500 + (TA)n Simple_repeat Simple_repeat 1 106 0 28 61 0 0 chr2 28412 28461 -250659393 + AT_rich Low_complexity Low_complexity 1 49 0 315 276 123 58 chr2 29005 29248 -250658606 + L1M4 LINE L1 2917 3175 -2971 880 228 106 26 chr2 29265 29577 -250658277 + L1M4 LINE L1 2142 2478 -3668 1652 138 0 0 chr2 29587 29826 -250658028 + L1P3 LINE L1 10 248 -6213 4742 131 58 99 chr2 29826 31256 -250656598 + pTR5 LTR ERV1 742 2433 -5 11163 107 15 14 chr2 31257 33063 -250654791 + L1P3 LINE L1 238 2041 -4420 3440 200 31 71 chr2 33063 34073 -250653781 + LTR5 LTR ERVK 1 969 0 11163 107 15 14 chr2 34073 34515 -250653339 + L1P3 LINE L1 2041 2499 -3962 22626 97 11 1 chr2 34515 38410 -250649444 + L1PA7 LINE L1 2254 6154 0 11163 107 15 14 chr2 38410 38444 -250649410 + L1P3 LINE L1 2499 2531 -3930 2023 61 4 8 chr2 38576 38838 -250649016 + AluY SINE Alu 34 294 -17 553 317 107 26 chr2 39186 39480 -250648374 - L2 LINE L2 -6 3307 3038 1628 122 35 8 chr2 39480 39735 -250648119 + AluSx SINE Alu 44 305 -7 553 317 107 26 chr2 39735 39959 -250647895 - L2 LINE L2 -275 3038 2742 24 53 0 0 chr2 40812 40850 -250647004 + AT_rich Low_complexity Low_complexity 1 38 0 349 350 106 0 chr2 41201 41381 -250646473 + MIR SINE MIR 49 247 -15 4491 172 86 19 chr2 41486 42520 -250645334 - L1MA4A LINE L1 -23 6982 5880 * 12065 197 19 11 chr2 42515 45098 -250642756 - L1MA4A LINE L1 -1221 5627 3022 10227 215 67 27 chr2 45426 46328 -250641526 - L1MA4A LINE L1 -3811 3037 2172 2103 121 3 0 chr2 46328 46618 -250641236 - AluSx SINE Alu -21 291 1 10227 215 67 27 chr2 46618 48437 -250639417 - L1MA4A LINE L1 -4676 2172 208 317 82 20 0 chr2 48689 48738 -250639116 + (GGAA)n Simple_repeat Simple_repeat 3 52 0 26 0 0 0 chr2 49518 49544 -250638310 + AT_rich Low_complexity Low_complexity 1 26 0 226 296 101 16 chr2 49764 50011 -250637843 + L1ME4a LINE L1 5820 6087 -34 502 250 101 60 chr2 50508 50756 -250637098 - MIR SINE MIR 0 262 5 2315 103 0 0 chr2 51102 51402 -250636452 - AluSx SINE Alu -12 300 1 291 293 0 40 chr2 52047 52122 -250635732 + L2 LINE L2 3181 3252 -20 287 263 64 99 chr2 52543 52714 -250635140 - L3 LINE CR1 -350 1227 1063 2266 112 3 0 chr2 52906 53209 -250634645 + AluSx SINE Alu 1 304 -8 281 333 24 56 chr2 53224 53350 -250634504 + L2 LINE L2 3116 3237 -35 195 301 60 48 chr2 53516 53599 -250634255 - MIR SINE MIR -168 94 11 264 207 261 27 chr2 54790 54901 -250632953 + L2 LINE L2 3136 3272 0 2273 90 3 7 chr2 55311 55612 -250632242 + AluSc SINE Alu 1 300 -9 545 300 77 66 chr2 55723 56073 -250631781 - L2 LINE L2 -368 2946 2593 3759 227 55 2 chr2 56074 56923 -250630931 - MER45B DNA AcHobo -145 895 2 1543 208 5 49 chr2 56981 57191 -250630663 + Charlie4a DNA MER1_type 67 250 -1711 2060 111 7 24 chr2 57191 57489 -250630365 + AluSg SINE Alu 1 293 -17 1543 208 5 49 chr2 57489 57705 -250630149 + Charlie4a DNA MER1_type 250 474 -34 554 259 228 4 chr2 57724 57983 -250629871 - L2 LINE L2 -2959 355 39 318 218 45 115 chr2 58384 58457 -250629397 - HAL1 LINE L1 -1588 919 861 1939 117 28 14 chr2 58457 58748 -250629106 + AluSx SINE Alu 1 295 -17 318 218 45 115 chr2 58748 58830 -250629024 - HAL1 LINE L1 -1646 861 775 221 298 0 0 chr2 59532 59589 -250628265 + MER5B DNA MER1_type 122 178 0 492 229 144 8 chr2 60204 60322 -250627532 - MER94 DNA DNA 0 134 1 654 242 88 16 chr2 60660 60854 -250627000 - MIR SINE MIR -2 260 53 310 302 100 83 chr2 60954 61364 -250626490 - L2 LINE L2 -3 3269 2853 225 0 0 0 chr2 61470 61495 -250626359 + (TGAA)n Simple_repeat Simple_repeat 4 28 0 335 252 93 0 chr2 64313 64420 -250623434 + MIR SINE MIR 100 216 -46 409 213 87 47 chr2 64442 64569 -250623285 - MIR SINE MIR -124 138 7 7411 54 5 13 chr2 65185 66662 -250621192 + SVA Other Other 1 1386 0 277 371 60 22 chr2 66778 67010 -250620844 - MIR SINE MIR -1 261 21 4387 189 9 40 chr2 67848 68848 -250619006 - L1 LINE L1 -1055 5091 4123 197 132 26 0 chr2 69017 69055 -250618799 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 573 270 20 14 chr2 69676 69824 -250618030 + MER5B DNA MER1_type 30 178 0 1921 169 3 3 chr2 69938 70246 -250617608 - AluJo SINE Alu -4 308 1 2148 103 3 0 chr2 71659 71941 -250615913 + AluSp SINE Alu 2 284 -29 1613 208 3 3 chr2 72110 72422 -250615432 + AluJb SINE Alu 1 312 0 336 222 247 31 chr2 72531 72693 -250615161 + L1ME3A LINE L1 5612 5808 -354 239 200 46 31 chr2 72722 72787 -250615067 - LTR43 LTR ERV1 -24 578 513 959 266 50 16 chr2 72875 73195 -250614659 - LTR43 LTR ERV1 -141 461 131 998 209 59 62 chr2 73276 73615 -250614239 + L1ME3A LINE L1 5825 6162 -8 3698 148 26 11 chr2 74109 74717 -250613137 + L1MC1 LINE L1 5709 6325 -8 2678 99 79 27 chr2 74718 75060 -250612794 + MSTA LTR MaLR 1 369 -59 1830 144 27 27 chr2 75060 75359 -250612495 + AluSx SINE Alu 1 299 -13 2678 99 79 27 chr2 75359 75421 -250612433 + MSTA LTR MaLR 369 426 -2 2454 208 73 7 chr2 76767 77333 -250610521 - L1MA9 LINE L1 -539 5773 5166 1922 181 20 75 chr2 77326 77834 -250610020 + L1MA9 LINE L1 5803 6282 -30 * 22 0 0 0 chr2 77834 77856 -250609998 + AT_rich Low_complexity Low_complexity 1 22 0 1157 218 20 110 chr2 77918 78317 -250609537 + MLT1A1 LTR MaLR 1 363 -2 2344 135 114 5 chr2 80626 81012 -250606842 - MSTA LTR MaLR 0 428 1 1931 73 0 8 chr2 81367 81614 -250606240 + AluY SINE Alu 54 298 -13 32 75 0 0 chr2 82008 82075 -250605779 + AT_rich Low_complexity Low_complexity 1 67 0 1804 87 0 0 chr2 82080 82310 -250605544 - PABL_A LTR ERV1 -430 230 1 10992 77 15 1 chr2 82310 83724 -250604130 - PABL_A-int LTR ERV1 0 5015 3583 198 208 188 0 chr2 83975 84023 -250603831 - L2 LINE L2 -249 3023 2967 270 247 0 55 chr2 84042 84115 -250603739 + L2 LINE L2 3242 3310 -3 312 291 81 12 chr2 84238 84410 -250603444 - L1MEc LINE L1 -4976 1587 1404 720 188 0 99 chr2 84478 84659 -250603195 + Tigger1 DNA MER2_type 1 163 -2255 * 1236 156 24 5 chr2 84641 84853 -250603001 + Tigger1 DNA MER2_type 2203 2418 0 7310 223 52 31 chr2 84853 84916 -250602938 - L1MEc LINE L1 -1913 4469 4409 2269 105 20 0 chr2 84916 85220 -250602634 - AluSp SINE Alu -3 310 1 7310 223 52 31 chr2 85220 85864 -250601990 - L1MEc LINE L1 -1973 4409 3780 192 77 0 0 chr2 85864 85890 -250601964 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 7310 223 52 31 chr2 85890 86784 -250601070 - L1MEc LINE L1 -2602 3780 2811 2187 170 31 0 chr2 86784 87137 -250600717 - THE1B LTR MaLR 0 364 1 7310 223 52 31 chr2 87137 87605 -250600249 - L1MEc LINE L1 -3571 2811 2354 2451 162 42 50 chr2 87609 88091 -250599763 + MER44D DNA MER2_type 4 481 -224 2371 136 48 112 chr2 88114 88778 -250599076 + MER4A LTR ERV1 1 465 0 1280 168 52 22 chr2 88780 89012 -250598842 + MER44D DNA MER2_type 479 589 -16 421 214 44 13 chr2 89016 89176 -250598678 - L1MEc LINE L1 -4018 2365 2202 671 91 10 20 chr2 89185 89284 -250598570 + MER4A LTR ERV1 1 98 -566 1649 103 45 91 chr2 89284 89646 -250598208 + MER4A LTR ERV1 261 664 0 328 255 41 0 chr2 89646 89744 -250598110 - L1MEc LINE L1 -4190 2194 2093 597 265 180 51 chr2 90523 90995 -250596859 - L1MEc LINE L1 -5381 991 459 538 166 32 35 chr2 91029 91184 -250596670 + MER51A LTR ERV1 1 154 -223 1631 174 46 10 chr2 91186 91490 -250596364 + MER51B LTR ERV1 63 377 0 330 242 74 34 chr2 91609 91758 -250596096 - HAL1b LINE L1 0 1348 1194 1210 65 130 0 chr2 92366 92535 -250595319 - LTR17 LTR ERV1 -2 778 588 898 85 0 0 chr2 92551 92669 -250595185 + AluY SINE Alu 187 304 -7 4898 67 0 3 chr2 92669 93269 -250594585 - LTR17 LTR ERV1 -182 598 1 2403 65 0 0 chr2 93269 93560 -250594294 - HERV17 LTR ERV1 0 8626 8336 303 98 0 0 chr2 93550 93591 -250594263 - HERV17 LTR ERV1 -1077 7549 7509 * 9680 47 10 0 chr2 93583 94731 -250593123 - HERV17 LTR ERV1 -2607 6019 4861 14584 45 4 3 chr2 94833 97002 -250590852 - HERV17 LTR ERV1 -4023 4603 2432 13791 70 17 26 chr2 97001 98835 -250589019 - HERV17 LTR ERV1 -6808 1818 1 * 6348 64 30 5 chr2 98835 99596 -250588258 - LTR17 LTR ERV1 0 780 1 218 340 53 0 chr2 100110 100204 -250587650 - L2 LINE L2 -262 3051 2953 1518 183 7 43 chr2 100827 101128 -250586726 + AluJb SINE Alu 1 290 -22 484 358 29 5 chr2 102674 102878 -250584976 + L3 LINE CR1 1261 1469 -108 7657 52 6 0 chr2 102962 104312 -250583542 + L1PA7 LINE L1 4793 6152 -2 208 308 91 28 chr2 105400 105543 -250582311 + MIR SINE MIR 36 187 -75 4364 192 56 10 chr2 106711 108046 -250579808 + L1MC2 LINE L1 4791 6170 -174 196 270 27 40 chr2 108747 108821 -250579033 + MIR3 SINE MIR 84 156 -52 32 0 0 0 chr2 108911 108943 -250578911 + AT_rich Low_complexity Low_complexity 1 32 0 378 61 0 0 chr2 109715 109764 -250578090 + (CA)n Simple_repeat Simple_repeat 2 50 0 2636 51 0 0 chr2 110276 110587 -250577267 + AluY SINE Alu 1 311 0 233 250 40 13 chr2 110740 110816 -250577038 - HsTC2 DNA Tc2 -1820 78 1 264 269 75 32 chr2 112932 113025 -250574829 + HAL1 LINE L1 806 902 -1605 450 219 0 0 chr2 113144 113249 -250574605 + (CATATA)n Simple_repeat Simple_repeat 2 106 0 713 136 19 0 chr2 113249 113352 -250574502 - AluSx SINE Alu -16 293 189 969 149 0 0 chr2 113352 113493 -250574361 - AluSx SINE Alu -172 141 1 22 0 0 0 chr2 113594 113616 -250574238 + AT_rich Low_complexity Low_complexity 1 22 0 1870 167 17 0 chr2 116057 116356 -250571498 + AluSx SINE Alu 1 304 -8 3196 103 38 0 chr2 117228 117324 -250570530 + L1PB1 LINE L1 5684 5775 -376 182 37 37 0 chr2 117324 117351 -250570503 + (TA)n Simple_repeat Simple_repeat 1 28 0 * 324 0 0 0 chr2 117350 117386 -250570468 + (CA)n Simple_repeat Simple_repeat 2 37 0 3196 103 38 0 chr2 117351 117737 -250570117 + L1PB1 LINE L1 5775 6148 -3 637 307 32 42 chr2 118728 119158 -250568696 + LTR35 LTR ERV1 141 556 0 1559 256 22 24 chr2 119163 119577 -250568277 + LTR35-int LTR ERV1 5 417 -1369 1005 96 0 20 chr2 119585 119731 -250568123 + L1PA4 LINE L1 6012 6154 -1 5983 176 49 36 chr2 119812 121105 -250566749 + LTR57-int LTR ERVL 288 1596 -3747 * 6258 159 79 78 chr2 120157 122450 -250565404 + LTR35-int LTR ERV1 682 4183 -2148 625 135 76 189 chr2 122586 122771 -250565083 + LOR1-int LTR ERV1 3786 3949 -4171 367 93 30 81 chr2 122897 122997 -250564857 + LOR1-int LTR ERV1 4602 4682 -1264 1108 189 5 5 chr2 123001 123191 -250564663 + LOR1-int LTR ERV1 6908 7097 -1023 4043 153 59 22 chr2 123194 123480 -250564374 + MER49 LTR ERV1 1 275 -648 2619 127 16 0 chr2 123480 123849 -250564005 + THE1C LTR MaLR 1 375 0 4043 153 59 22 chr2 123849 124294 -250563560 + MER49 LTR ERV1 275 759 -164 365 282 71 81 chr2 124481 124852 -250563002 + LOR1-int LTR ERV1 4971 7466 -654 736 270 59 55 chr2 125043 125495 -250562359 + LTR35 LTR ERV1 88 556 0 23 0 0 0 chr2 125615 125638 -250562216 + AT_rich Low_complexity Low_complexity 1 23 0 1104 277 108 36 chr2 125792 126290 -250561564 + MLT1E LTR MaLR 52 585 -8 225 0 0 0 chr2 126294 126319 -250561535 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 481 234 70 88 chr2 126335 126562 -250561292 + L1MC4 LINE L1 7820 8042 0 2795 168 25 41 chr2 126677 127194 -250560660 - LTR22 LTR ERVK 0 509 1 819 115 0 0 chr2 127384 127514 -250560340 + (GGAA)n Simple_repeat Simple_repeat 3 132 0 1607 210 49 3 chr2 127840 128187 -250559667 + MLT1A1 LTR MaLR 1 363 -2 331 313 146 18 chr2 128261 128536 -250559318 + L1MEd LINE L1 602 911 -5723 437 295 100 33 chr2 128825 129205 -250558649 + L1MEd LINE L1 1220 1716 -4971 415 323 46 5 chr2 129218 129413 -250558441 + L2 LINE L2 2636 2838 -476 516 253 133 28 chr2 129495 129744 -250558110 + L2 LINE L2 3039 3313 0 26 30 0 0 chr2 131058 131091 -250556763 + AT_rich Low_complexity Low_complexity 1 33 0 305 328 61 22 chr2 131297 131477 -250556377 - MIR SINE MIR -43 219 33 6387 102 48 1 chr2 132128 133055 -250554799 - Tigger1 DNA MER2_type -777 1641 672 605 203 47 20 chr2 133300 133448 -250554406 - L1MC2 LINE L1 -9 6335 6184 376 238 139 112 chr2 134146 134676 -250553178 + L1M2 LINE L1 455 1434 -5415 448 66 0 0 chr2 134886 134947 -250552907 + Alu SINE Alu 235 295 -14 284 62 0 21 chr2 135352 135400 -250552454 + (CA)n Simple_repeat Simple_repeat 2 48 0 25 51 0 0 chr2 135618 135657 -250552197 + AT_rich Low_complexity Low_complexity 1 39 0 2252 248 95 11 chr2 135803 136509 -250551345 - L1ME1 LINE L1 -128 6107 5343 1109 213 49 0 chr2 136524 136787 -250551067 - L1MA4 LINE L1 -11 6289 6014 360 271 43 7 chr2 136883 137023 -250550831 - L1ME1 LINE L1 -5000 1396 1252 243 278 47 53 chr2 137103 137314 -250550540 - L1ME LINE L1 -4723 1278 778 475 310 90 29 chr2 137720 138097 -250549757 - L2 LINE L2 -662 2652 2253 21 0 0 0 chr2 138759 138780 -250549074 + AT_rich Low_complexity Low_complexity 1 21 0 1732 188 28 17 chr2 139330 139691 -250548163 + MLT1A1 LTR MaLR 1 365 0 263 28 28 0 chr2 140227 140263 -250547591 + (TAA)n Simple_repeat Simple_repeat 3 39 0 246 269 51 0 chr2 141120 141198 -250546656 - MIR SINE MIR -95 167 86 472 193 11 0 chr2 142486 142574 -250545280 + MER20 DNA MER1_type 129 217 -2 216 226 32 16 chr2 143215 143277 -250544577 - MIR SINE MIR -172 90 28 435 223 48 0 chr2 145221 145324 -250542530 - Charlie2 DNA MER1_type -892 1970 1863 376 365 68 4 chr2 145354 145617 -250542237 - Charlie2 DNA MER1_type -2502 280 1 325 286 20 34 chr2 146387 146534 -250541320 + L1MC4a LINE L1 5296 5440 -681 326 332 50 23 chr2 147255 147604 -250540250 + L1MC4a LINE L1 5531 5819 -302 21 0 0 0 chr2 147612 147633 -250540221 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr2 147934 147955 -250539899 + (TG)n Simple_repeat Simple_repeat 2 22 0 2878 10 0 0 chr2 149492 149798 -250538056 + AluYa5 SINE Alu 1 306 -5 1451 167 29 8 chr2 150574 150814 -250537040 - AluSx SINE Alu -28 284 40 22 35 0 0 chr2 151244 151273 -250536581 + AT_rich Low_complexity Low_complexity 1 29 0 240 149 0 0 chr2 151522 151569 -250536285 + (CATATA)n Simple_repeat Simple_repeat 4 50 0 2387 70 0 0 chr2 152488 152788 -250535066 - L1PA6 LINE L1 0 6154 5855 234 269 160 9 chr2 152792 153004 -250534850 + L1ME4a LINE L1 5865 6108 -13 187 317 29 10 chr2 154506 154610 -250533244 - MIR SINE MIR 0 262 157 2315 90 10 3 chr2 154921 155221 -250532633 - AluSq SINE Alu -11 302 1 207 266 11 68 chr2 156146 156323 -250531531 + (CAGGG)n Simple_repeat Simple_repeat 1 167 0 272 250 64 70 chr2 156349 156509 -250531345 + MIR SINE MIR 58 216 -46 378 316 9 47 chr2 156509 156724 -250531130 + MIR SINE MIR 1 207 -55 1059 182 20 20 chr2 157623 157876 -250529978 + L1MA4 LINE L1 6044 6296 -4 326 220 180 20 chr2 158112 158304 -250529550 + LTR52 LTR ERVL 9 169 -252 378 0 0 0 chr2 158304 158346 -250529508 + (TG)n Simple_repeat Simple_repeat 1 42 0 326 220 180 20 chr2 158346 158398 -250529456 + LTR52 LTR ERVL 169 397 -24 586 231 118 18 chr2 159250 159419 -250528435 + MER105 DNA DNA 1 186 -18 6378 232 63 56 chr2 159756 162766 -250525088 + L1M4b LINE L1 15 3035 -3922 231 36 0 0 chr2 162766 162794 -250525060 + (CAA)n Simple_repeat Simple_repeat 2 29 0 6378 232 63 56 chr2 162794 163671 -250524183 + L1M4b LINE L1 3035 3904 -3053 359 221 132 29 chr2 163676 163812 -250524042 + LTR16A1 LTR ERVL 296 445 -12 222 196 22 0 chr2 163823 163869 -250523985 + MIR SINE MIR 70 116 -146 247 282 155 0 chr2 164297 164400 -250523454 + L1ME LINE L1 5532 5650 -471 21 36 0 0 chr2 164572 164600 -250523254 + AT_rich Low_complexity Low_complexity 1 28 0 285 300 17 33 chr2 165443 165563 -250522291 + MER20 DNA MER1_type 100 217 -2 973 149 6 6 chr2 165732 165907 -250521947 + L1MB2 LINE L1 5288 5462 -721 3651 159 88 45 chr2 165923 167302 -250520552 - pTR5 LTR ERV1 -23 1683 31 1118 227 28 18 chr2 167305 167587 -250520267 + L1MB2 LINE L1 5885 6169 -2 246 128 0 0 chr2 167796 167835 -250520019 + (T)n Simple_repeat Simple_repeat 1 39 0 1660 113 0 0 chr2 167843 168055 -250519799 - AluSg SINE Alu -98 212 1 245 270 261 0 chr2 170733 170848 -250517006 - L1M4 LINE L1 -5477 1157 1013 921 232 161 39 chr2 171339 171899 -250515955 - MER92B LTR ERV1 -8 628 1 217 266 101 0 chr2 175243 175322 -250512532 + L2 LINE L2 3210 3296 -17 200 341 103 48 chr2 175471 175597 -250512257 - L2 LINE L2 -3 3269 3137 213 315 46 8 chr2 176050 176180 -250511674 - MIR SINE MIR -119 143 9 279 236 88 54 chr2 177785 177933 -250509921 - L1MC4a LINE L1 -1424 6384 6232 1333 193 227 14 chr2 178016 178369 -250509485 + MSTA LTR MaLR 1 428 0 416 244 25 10 chr2 179009 179146 -250508708 - L1M4 LINE L1 -5924 710 14 2176 122 140 8 chr2 179541 179919 -250507935 + MSTA LTR MaLR 1 428 0 3688 112 11 53 chr2 180453 181061 -250506793 + MER4B LTR ERV1 1 583 -27 543 101 0 0 chr2 182619 182698 -250505156 + (GGAA)n Simple_repeat Simple_repeat 3 81 0 34467 55 11 14 chr2 182798 187064 -250500790 - HERV17 LTR ERV1 -4377 4249 1 6059 62 30 5 chr2 187064 187825 -250500029 - LTR17 LTR ERV1 0 780 1 1240 226 98 18 chr2 238018 238457 -250449397 + HERV3 LTR ERV1 3412 3960 -976 1587 229 60 86 chr2 238530 239028 -250448826 + HERV3 LTR ERV1 3605 4089 -782 2781 244 2 0 chr2 239128 239657 -250448197 + HERV3 LTR ERV1 1175 1704 -6722 1987 229 11 0 chr2 239756 240127 -250447727 + HERV3 LTR ERV1 1634 2008 -6418 1240 115 6 33 chr2 240127 240310 -250447544 + AluSc SINE Alu 1 178 -131 593 234 14 7 chr2 240411 240552 -250447302 - Tigger1 DNA MER2_type -2275 143 2 673 188 108 5 chr2 240565 240751 -250447103 - L1MCa LINE L1 -3950 2476 2272 752 158 68 15 chr2 240753 240886 -250446968 - AluJ SINE Alu -16 296 157 638 213 41 0 chr2 241014 241136 -250446718 - AluJ SINE Alu -140 172 46 995 175 62 42 chr2 241160 241401 -250446453 - L1MCa LINE L1 -4175 2251 2001 2017 141 0 10 chr2 241401 241699 -250446155 + AluY SINE Alu 1 295 -16 995 175 62 42 chr2 241699 241765 -250446089 - L1MCa LINE L1 -4425 2001 1938 316 26 0 136 chr2 241885 242076 -250445778 + (GGGAGA)n Simple_repeat Simple_repeat 1 165 0 268 261 34 23 chr2 246201 246289 -250441565 - MLT1J2 LTR MaLR 0 450 362 324 316 24 36 chr2 246389 246557 -250441297 - MLT1J1 LTR MaLR -241 205 40 208 146 0 24 chr2 248475 248516 -250439338 + (CCCCCA)n Simple_repeat Simple_repeat 1 40 0 181 191 43 0 chr2 248793 248840 -250439014 - MIR SINE MIR -66 142 94 485 216 27 20 chr2 249115 249258 -250438596 + MSTC LTR MaLR 20 162 -203 512 244 189 11 chr2 250383 250563 -250437291 + MER20 DNA MER1_type 1 212 -7 362 283 65 62 chr2 252316 252687 -250435167 + L2 LINE L2 2941 3312 -1 4198 213 23 13 chr2 252875 254140 -250433714 + L1MB3 LINE L1 4898 6181 -2 451 299 81 15 chr2 258765 259099 -250428755 - L2 LINE L2 -734 2580 2225 26 0 0 0 chr2 259667 259693 -250428161 + AT_rich Low_complexity Low_complexity 1 26 0 343 267 114 23 chr2 260406 260537 -250427317 + Charlie8 DNA MER1_type 14 156 -2261 25 0 0 0 chr2 260761 260786 -250427068 + AT_rich Low_complexity Low_complexity 1 25 0 1873 150 0 27 chr2 260983 261276 -250426578 + AluJb SINE Alu 1 285 -27 208 237 26 35 chr2 261325 261439 -250426415 + A-rich Low_complexity Low_complexity 3 115 0 296 162 68 14 chr2 261482 261556 -250426298 - MER116 DNA Mariner -2 78 1 762 240 55 87 chr2 261777 262124 -250425730 - MLT1A1 LTR MaLR 0 365 29 4585 188 46 23 chr2 262126 262841 -250425013 - L1 LINE L1 -841 5305 4608 1796 96 46 0 chr2 262841 263081 -250424773 - AluY SINE Alu -20 291 41 4585 188 46 23 chr2 263081 263201 -250424653 - L1 LINE L1 -1538 4608 4492 4987 60 3 8 chr2 263201 263830 -250424024 - L1PA8 LINE L1 -1 6171 5546 4585 188 46 23 chr2 263830 264024 -250423830 - L1 LINE L1 -1654 4492 4248 324 0 0 0 chr2 264024 264060 -250423794 + (TG)n Simple_repeat Simple_repeat 2 37 0 4585 188 46 23 chr2 264060 264096 -250423758 - L1 LINE L1 -1898 4248 4214 1512 161 59 3 chr2 264232 264554 -250423300 - L1 LINE L1 -2437 3709 3370 983 267 64 20 chr2 264563 264953 -250422901 - L1 LINE L1 -3090 3056 2650 185 229 82 0 chr2 265213 265274 -250422580 + MIR SINE MIR 47 112 -150 1554 199 7 34 chr2 266416 266712 -250421142 - AluJb SINE Alu -24 288 1 10643 93 68 11 chr2 267450 269476 -250418378 - L1PBa LINE L1 -3938 2925 634 1295 152 0 0 chr2 269476 269674 -250418180 - L1PBa LINE L1 -6663 200 3 261 83 0 0 chr2 270913 270949 -250416905 + (TA)n Simple_repeat Simple_repeat 1 36 0 470 228 179 55 chr2 271804 272062 -250415792 - MLT1H LTR MaLR 0 549 314 1277 239 38 11 chr2 272147 272591 -250415263 + L1ME2 LINE L1 2121 2576 -3570 5331 255 91 37 chr2 272600 274409 -250413445 + L1ME2 LINE L1 2835 4544 -1620 6107 23 0 10 chr2 274409 275116 -250412738 + L1PA3 LINE L1 5452 6151 -4 5331 255 91 37 chr2 275116 276363 -250411491 + L1ME2 LINE L1 4544 6064 -100 1333 241 95 28 chr2 276363 276836 -250411018 + MLT1D LTR MaLR 1 505 0 5331 255 91 37 chr2 276836 276905 -250410949 + L1ME2 LINE L1 6064 6128 -36 2525 117 14 3 chr2 277256 277616 -250410238 + THE1B LTR MaLR 1 364 0 9795 116 38 38 chr2 277616 279196 -250408658 + THE1B-int LTR MaLR 1 1580 0 2239 124 74 0 chr2 279196 279535 -250408319 + THE1B LTR MaLR 1 364 0 225 203 72 29 chr2 279671 279740 -250408114 + L1ME2 LINE L1 6057 6128 -36 21 57 0 0 chr2 279851 279886 -250407968 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr2 281586 281609 -250406245 + AT_rich Low_complexity Low_complexity 1 23 0 1171 125 0 0 chr2 281843 282003 -250405851 - AluSg/x SINE Alu -16 294 135 1169 284 51 19 chr2 282403 282928 -250404926 + HAL1 LINE L1 799 1340 -1167 298 287 81 23 chr2 283179 283353 -250404501 + HAL1 LINE L1 2019 2202 -305 995 251 95 10 chr2 283614 283909 -250403945 + MER82 DNA MER2_type 306 625 -28 513 209 98 20 chr2 284414 284567 -250403287 - L1MB5 LINE L1 0 6174 6010 569 278 17 26 chr2 284575 284805 -250403049 + HAL1 LINE L1 1019 1246 -1261 4550 204 73 75 chr2 284905 286459 -250401395 - L1M4 LINE L1 -848 5298 3749 242 299 0 31 chr2 287571 287668 -250400186 + CT-rich Low_complexity Low_complexity 3 96 0 1755 157 14 17 chr2 288860 289154 -250398700 + AluJo SINE Alu 2 294 -18 5132 163 31 31 chr2 289478 290192 -250397662 - L1MA8 LINE L1 -4 6287 5573 2139 125 0 0 chr2 290192 290489 -250397365 + AluSx SINE Alu 1 297 -15 5132 163 31 31 chr2 290489 291022 -250396832 - L1MA8 LINE L1 -717 5574 5042 2341 186 28 24 chr2 291023 291491 -250396363 + L1MA8 LINE L1 4567 5036 -1110 21 0 0 0 chr2 291499 291520 -250396334 + AT_rich Low_complexity Low_complexity 1 21 0 1025 190 22 0 chr2 291568 291747 -250396107 - AluJb SINE Alu -3 309 127 809 278 69 39 chr2 292199 292606 -250395248 + L1ME4a LINE L1 5502 5920 -201 198 171 0 0 chr2 292841 292882 -250394972 + (TTA)n Simple_repeat Simple_repeat 2 42 0 358 238 48 55 chr2 293483 293671 -250394183 - MLT1A2 LTR MaLR -181 209 7 3045 148 30 0 chr2 294242 294748 -250393106 - L1MA4A LINE L1 0 6303 5783 249 266 0 0 chr2 294748 294842 -250393012 + (TG)n Simple_repeat Simple_repeat 2 95 0 1063 156 14 46 chr2 294845 295063 -250392791 - L1MA4A LINE L1 -514 5789 5579 260 245 21 32 chr2 296262 296356 -250391498 + L1ME3A LINE L1 5348 5440 -681 2168 144 69 15 chr2 297377 297781 -250390073 + MSTA LTR MaLR 1 426 -2 256 343 35 47 chr2 299652 299993 -250387861 + L1ME3A LINE L1 5609 5945 -225 239 261 14 0 chr2 300345 300414 -250387440 - MER5A DNA MER1_type -84 105 36 227 270 0 0 chr2 300508 300571 -250387283 + L1P LINE L1 4940 5002 -1144 703 271 171 39 chr2 300776 301395 -250386459 + L1MC4a LINE L1 5267 5967 -1841 1512 233 30 30 chr2 301535 301995 -250385859 - MLT1C LTR MaLR -2 465 6 333 194 32 0 chr2 302070 302132 -250385722 - AluJ/FLAM SINE Alu -216 86 23 531 256 70 44 chr2 302719 302989 -250384865 - MER97a DNA MER1_type? -16 878 602 845 106 12 32 chr2 302991 303235 -250384619 + (TTTC)n Simple_repeat Simple_repeat 1 239 0 722 167 13 51 chr2 303263 303419 -250384435 - FRAM SINE Alu 0 176 27 721 246 99 9 chr2 303463 303695 -250384159 - MER97b DNA MER1_type? -780 273 21 276 30 0 0 chr2 304051 304084 -250383770 + (TTA)n Simple_repeat Simple_repeat 2 34 0 181 211 0 0 chr2 305994 306032 -250381822 - MIR SINE MIR -67 141 104 669 213 35 0 chr2 306157 306298 -250381556 + MER20 DNA MER1_type 5 150 -69 440 247 283 11 chr2 306303 306586 -250381268 - MER57A LTR ERV1 -2 401 42 198 407 12 0 chr2 307325 307406 -250380448 + L2 LINE L2 3187 3268 -4 1267 191 100 16 chr2 308598 308918 -250378936 + MLT2C1 LTR ERVL 3 349 -48 467 182 30 0 chr2 310227 310326 -250377528 - MLT2C1 LTR ERVL -295 102 1 444 206 178 14 chr2 312679 312825 -250375029 - MER21B LTR ERV1 -365 498 329 392 51 0 17 chr2 317545 317604 -250370250 + L1PA6 LINE L1 6097 6154 0 186 289 0 0 chr2 318100 318152 -250369702 + L2 LINE L2 3262 3313 0 26 0 0 0 chr2 319458 319484 -250368370 + AT_rich Low_complexity Low_complexity 1 26 0 3290 145 6 15 chr2 320157 320687 -250367167 - MER1A DNA MER1_type -2 525 1 1670 195 33 0 chr2 322396 322698 -250365156 - AluJo SINE Alu 0 312 1 2489 111 45 0 chr2 324734 325093 -250362761 - THE1C LTR MaLR 0 375 1 321 303 82 65 chr2 326132 326485 -250361369 + HAL1b LINE L1 324 682 -666 402 276 77 7 chr2 326946 327146 -250360708 + L1M4 LINE L1 4061 4274 -1872 2310 185 18 25 chr2 327173 327410 -250360444 - Tigger2 DNA MER2_type 0 2718 2484 2527 60 0 3 chr2 327410 327711 -250360143 + AluY SINE Alu 1 300 -11 2310 185 18 25 chr2 327711 327922 -250359932 - Tigger2 DNA MER2_type -234 2484 2273 450 159 0 0 chr2 327912 327981 -250359873 - Tigger2 DNA MER2_type -2649 69 1 * 425 337 101 45 chr2 328147 328681 -250359173 - L1MEd LINE L1 -5003 1116 553 2090 181 37 16 chr2 329219 329655 -250358199 + MER65A LTR ERV1 1 445 0 2610 64 0 0 chr2 334654 334965 -250352889 - AluY SINE Alu 0 311 1 210 359 41 14 chr2 335260 335405 -250352449 - MIR SINE MIR -27 235 87 27 0 0 0 chr2 337645 337672 -250350182 + AT_rich Low_complexity Low_complexity 1 27 0 339 286 97 10 chr2 339387 339583 -250348271 + L1MDa LINE L1 188 400 -6140 725 219 38 50 chr2 340176 340414 -250347440 + L1MDa LINE L1 1048 1282 -5261 721 241 66 38 chr2 340425 340744 -250347110 - L1MDa LINE L1 -4344 2196 1869 356 69 0 52 chr2 340766 340824 -250347030 + Alu SINE Alu 248 302 0 305 313 91 0 chr2 340869 340968 -250346886 + L1MDa LINE L1 2091 2198 -4342 1044 98 0 0 chr2 341068 341211 -250346643 - L1P4 LINE L1 -449 5719 5577 887 102 0 0 chr2 341214 341352 -250346502 + L1P4 LINE L1 5410 5547 -621 246 277 0 15 chr2 341770 341835 -250346019 + CT-rich Low_complexity Low_complexity 5 68 0 631 288 245 8 chr2 343194 343725 -250344129 + L2 LINE L2 1294 1950 -1364 386 298 0 10 chr2 345791 345895 -250341959 + (CGTG)n Simple_repeat Simple_repeat 1 103 0 351 286 0 0 chr2 345909 346087 -250341767 + (TG)n Simple_repeat Simple_repeat 1 178 0 320 280 126 14 chr2 346448 346591 -250341263 + MIR SINE MIR 104 262 0 2074 116 7 0 chr2 347018 347312 -250340542 + AluSq SINE Alu 4 299 -14 248 305 107 15 chr2 347415 347546 -250340308 - MIR SINE MIR -89 173 31 352 237 13 0 chr2 348968 349120 -250338734 + (TG)n Simple_repeat Simple_repeat 1 154 0 627 188 0 18 chr2 351291 351456 -250336398 + CT-rich Low_complexity Low_complexity 1 162 0 200 300 83 0 chr2 351621 351681 -250336173 - L2 LINE L2 0 3272 3208 356 69 0 52 chr2 352545 352603 -250335251 + Alu SINE Alu 248 302 0 1654 233 43 31 chr2 352648 353435 -250334419 + L1MD1 LINE L1 2091 2890 -3650 836 148 32 0 chr2 353435 353590 -250334264 + L1MB2 LINE L1 6009 6168 -3 1654 233 43 31 chr2 353590 353717 -250334137 + L1MD1 LINE L1 2890 3014 -3526 2828 128 12 16 chr2 353758 353924 -250333930 - MSTA LTR MaLR 0 428 263 2884 107 81 2 chr2 353924 354303 -250333551 + MLT2A2 LTR ERVL 1 418 -35 519 17 0 0 chr2 354303 354363 -250333491 + (TA)n Simple_repeat Simple_repeat 2 61 0 2884 107 81 2 chr2 354363 354403 -250333451 + MLT2A2 LTR ERVL 418 453 0 2828 128 12 16 chr2 354403 354666 -250333188 - MSTA LTR MaLR -165 263 1 1906 293 108 11 chr2 354666 356049 -250331805 + L1MD1 LINE L1 3050 4579 -1961 594 120 40 0 chr2 356049 356149 -250331705 + MLT1B LTR MaLR 1 104 -286 300 295 0 42 chr2 356178 356273 -250331581 - Tigger7 DNA MER2_type -8 2479 2389 * 1210 238 15 8 chr2 356271 356536 -250331318 - Tigger7 DNA MER2_type -466 267 1 * 1302 161 25 84 chr2 356536 356846 -250331008 + MLT1B LTR MaLR 100 390 0 2005 270 36 8 chr2 356846 357568 -250330286 + L1MD1 LINE L1 4575 5316 -1224 2040 237 63 38 chr2 357578 358511 -250329343 + L1MD1 LINE L1 5358 6390 -246 267 103 0 0 chr2 358511 358550 -250329304 + (CATATA)n Simple_repeat Simple_repeat 2 40 0 2040 237 63 38 chr2 358550 358804 -250329050 + L1MD1 LINE L1 6390 6636 0 426 368 96 15 chr2 358965 359237 -250328617 + HAL1 LINE L1 32 325 -2182 475 256 144 6 chr2 359298 359458 -250328396 + MER5A DNA MER1_type 8 189 0 247 326 259 0 chr2 359554 359701 -250328153 - MER5A DNA MER1_type -1 188 4 414 286 36 0 chr2 359710 359850 -250328004 - MER5B DNA MER1_type -23 155 11 323 305 55 8 chr2 359851 359979 -250327875 + HAL1 LINE L1 476 609 -1898 228 300 90 0 chr2 361387 361487 -250326367 - LTR33A LTR ERVL -14 509 401 854 275 43 39 chr2 361770 362253 -250325601 - HAL1 LINE L1 -954 1553 1069 750 163 24 36 chr2 362259 362425 -250325429 + MER53 DNA DNA 1 164 -25 720 291 171 71 chr2 362430 363206 -250324648 - HAL1 LINE L1 -1399 1108 255 2232 121 129 5 chr2 363515 363896 -250323958 - MSTA LTR MaLR 0 428 1 2390 190 95 15 chr2 365631 366178 -250321676 + LTR59 LTR ERV1 1 591 -6 370 326 62 31 chr2 366826 367050 -250320804 - L3 LINE CR1 -730 847 617 225 188 42 0 chr2 367598 367646 -250320208 + MLT1I LTR MaLR 320 369 -40 221 321 107 13 chr2 368983 369142 -250318712 + MIR SINE MIR 21 194 -68 390 226 0 0 chr2 369337 369443 -250318411 + (TG)n Simple_repeat Simple_repeat 1 106 0 2650 214 97 6 chr2 369559 370196 -250317658 + MER44D DNA MER2_type 2 696 -9 192 306 0 0 chr2 370399 370448 -250317406 + L2 LINE L2 3261 3309 -4 183 129 0 0 chr2 370805 370836 -250317018 + (TCCA)n Simple_repeat Simple_repeat 3 33 0 530 115 36 24 chr2 370853 371018 -250316836 + (TCTA)n Simple_repeat Simple_repeat 4 170 0 21 0 0 0 chr2 372629 372650 -250315204 + AT_rich Low_complexity Low_complexity 1 21 0 485 121 77 0 chr2 373047 373138 -250314716 - L1PA13 LINE L1 0 6163 6066 195 375 0 0 chr2 373631 373695 -250314159 + L2 LINE L2 3206 3269 -3 282 29 0 0 chr2 373775 373810 -250314044 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 292 319 113 12 chr2 375378 375538 -250312316 + MER5A DNA MER1_type 1 176 -13 296 336 64 0 chr2 375556 375681 -250312173 - L3 LINE CR1 -156 1421 1289 2443 174 54 19 chr2 377179 377645 -250310209 + MER49 LTR ERV1 441 922 -1 1019 285 67 86 chr2 379159 380355 -250307499 + L1MEc LINE L1 1309 2630 -3933 2278 212 19 24 chr2 380361 380542 -250307312 + L1 LINE L1 4695 4875 -1271 3418 82 14 0 chr2 380542 380980 -250306874 + MLT2A1 LTR ERVL 1 444 0 2278 212 19 24 chr2 380980 381373 -250306481 + L1 LINE L1 4875 5266 -880 1621 166 65 9 chr2 381473 381798 -250306056 - MER49 LTR ERV1 -580 343 1 198 103 0 0 chr2 382861 382890 -250304964 + (TG)n Simple_repeat Simple_repeat 1 29 0 183 361 24 0 chr2 384045 384128 -250303726 + MIR SINE MIR 26 110 -152 352 265 66 22 chr2 385857 385993 -250301861 - L1ME4a LINE L1 -5 6116 5975 245 304 173 20 chr2 386162 386520 -250301334 - L1ME4a LINE L1 -382 5739 5327 40 67 0 0 chr2 386520 386595 -250301259 + AT_rich Low_complexity Low_complexity 1 75 0 24 32 0 0 chr2 387236 387267 -250300587 + AT_rich Low_complexity Low_complexity 1 31 0 601 307 116 59 chr2 387366 387937 -250299917 + HAL1b LINE L1 567 902 -944 344 331 180 0 chr2 387938 388110 -250299744 + HAL1b LINE L1 939 1141 -705 702 260 83 56 chr2 388202 388541 -250299313 + L1M4 LINE L1 2932 3279 -2867 398 328 43 14 chr2 388773 389194 -250298660 + L1M4 LINE L1 4724 5156 -990 2962 253 59 30 chr2 389258 390347 -250297507 + L1MB7 LINE L1 382 1501 -5041 1260 216 88 15 chr2 390347 390676 -250297178 - MLT1A1 LTR MaLR -3 362 10 1626 241 50 8 chr2 390694 391076 -250296778 - MLT1A1-int LTR MaLR -8 1727 1330 418 174 0 0 chr2 391244 391313 -250296541 - MLT1A1-int LTR MaLR -988 747 679 2788 206 16 21 chr2 391445 392026 -250295828 - MLT1A1-int LTR MaLR -1078 657 80 621 247 70 0 chr2 392128 392314 -250295540 + L1MB7 LINE L1 5153 5351 -1293 1699 227 118 12 chr2 392328 392830 -250295024 + L1MB7 LINE L1 6055 6609 -73 4926 208 25 6 chr2 392875 393963 -250293891 + L1PA15 LINE L1 1281 2399 -4398 * 5045 164 37 25 chr2 393952 395681 -250292173 + L1PA15 LINE L1 5082 6816 0 276 125 0 54 chr2 395695 395751 -250292103 + L1MB8 LINE L1 6125 6177 -1 2089 108 0 0 chr2 395759 396047 -250291807 + AluSg SINE Alu 1 288 -22 454 197 57 16 chr2 396055 396177 -250291677 + L1MC4a LINE L1 5365 5491 -2317 1039 270 48 64 chr2 396294 396809 -250291045 + L1MC4a LINE L1 5481 5987 -1821 365 278 81 73 chr2 396987 397260 -250290594 + L1MC4a LINE L1 6166 6440 -1368 294 165 18 49 chr2 397876 398040 -250289814 + GA-rich Low_complexity Low_complexity 2 160 0 259 273 112 56 chr2 398892 399053 -250288801 - L2 LINE L2 -18 3295 3126 443 272 180 22 chr2 399163 399663 -250288191 - L2 LINE L2 -338 2976 2398 340 231 204 0 chr2 400035 400143 -250287711 - L2 LINE L2 -908 2406 2277 48 0 0 0 chr2 401303 401351 -250286503 + AT_rich Low_complexity Low_complexity 1 48 0 699 219 44 61 chr2 401916 402144 -250285710 - L1MC1 LINE L1 0 6333 6110 23 33 0 0 chr2 402517 402547 -250285307 + AT_rich Low_complexity Low_complexity 1 30 0 384 121 0 0 chr2 402572 402630 -250285224 - MADE1 DNA Mariner -2 78 21 185 367 52 29 chr2 404700 404910 -250282944 + L2 LINE L2 2107 2321 -993 184 235 62 49 chr2 407269 407350 -250280504 + L3b LINE CR1 1243 1324 -259 1180 203 37 37 chr2 410255 410365 -250277489 - L1MC2 LINE L1 -1 6343 6234 2270 92 0 0 chr2 410365 410668 -250277186 - AluY SINE Alu -8 303 1 1180 203 37 37 chr2 410668 410878 -250276976 - L1MC2 LINE L1 -109 6235 6023 * 3474 218 121 38 chr2 410875 411742 -250276112 - L1MCb LINE L1 -4509 2055 1261 2009 110 0 7 chr2 411742 412024 -250275830 + AluSx SINE Alu 1 280 -32 351 0 0 0 chr2 412026 412065 -250275789 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 3474 218 121 38 chr2 412065 412840 -250275014 - L1MCb LINE L1 -5303 1261 216 2579 128 5 3 chr2 412840 413214 -250274640 + THE1C LTR MaLR 1 375 0 3474 218 121 38 chr2 413214 413448 -250274406 - L1MCb LINE L1 -6348 216 3 2056 107 0 0 chr2 415314 415618 -250272236 - AluSg SINE Alu 0 304 1 203 402 20 10 chr2 415630 415732 -250272122 + MIR SINE MIR 18 120 -142 199 261 204 23 chr2 416217 416305 -250271549 + L2 LINE L2 3209 3312 -1 204 280 0 0 chr2 416415 416465 -250271389 + L2 LINE L2 3229 3278 -35 406 266 129 0 chr2 418012 418136 -250269718 - MIR SINE MIR -5 257 118 226 307 118 24 chr2 419404 419531 -250268323 - MIR3 SINE MIR -67 141 3 359 229 72 0 chr2 420424 420507 -250267347 + MER58B DNA MER1_type 237 325 -16 397 55 58 58 chr2 421990 422343 -250265511 + (TG)n Simple_repeat Simple_repeat 1 353 0 483 45 62 57 chr2 422419 422596 -250265258 + (TG)n Simple_repeat Simple_repeat 1 178 0 218 266 112 71 chr2 422981 423150 -250264704 + MIR SINE MIR 8 183 -79 710 307 82 46 chr2 425585 426378 -250261476 - L1MEc LINE L1 -3537 2678 1895 263 344 67 5 chr2 426413 426608 -250261246 - L1MEc LINE L1 -4596 1800 1594 181 43 0 0 chr2 429642 429665 -250258189 - MIR SINE MIR -117 145 123 233 220 20 0 chr2 431715 431765 -250256089 + L3 LINE CR1 1242 1292 -285 201 372 73 3 chr2 433289 433467 -250254387 + MIR SINE MIR 12 203 -59 8355 143 39 6 chr2 434475 434536 -250253318 + L1MA3 LINE L1 3622 3680 -2625 528 59 0 0 chr2 434536 434604 -250253250 + (GAA)n Simple_repeat Simple_repeat 2 69 0 8355 143 39 6 chr2 434604 437136 -250250718 + L1MA3 LINE L1 3680 6305 0 252 379 91 26 chr2 439057 439321 -250248533 - L2 LINE L2 -27 3245 2965 261 325 78 48 chr2 439619 439887 -250247967 - L2 LINE L2 -489 2825 2550 336 290 6 56 chr2 439922 440084 -250247770 - L1ME2 LINE L1 -9 6155 6002 * 621 333 47 15 chr2 440074 440162 -250247692 - L1M4 LINE L1 -2479 3667 3583 1682 184 42 0 chr2 440162 440450 -250247404 - AluJb SINE Alu -12 300 1 621 333 47 15 chr2 440450 440764 -250247090 - L1M4 LINE L1 -2563 3583 3252 * 2217 250 51 22 chr2 440746 441577 -250246277 - L1MC3 LINE L1 -749 5397 5170 699 284 59 6 chr2 441639 441977 -250245877 - L1MC3 LINE L1 -2661 3485 3130 620 144 68 7 chr2 441984 442130 -250245724 + L1MA7 LINE L1 6130 6284 -7 319 319 42 0 chr2 442135 442301 -250245553 + L1ME3A LINE L1 5107 5279 -867 693 302 99 29 chr2 442436 442993 -250244861 + L1ME3A LINE L1 5354 5949 -221 328 203 27 0 chr2 442994 443068 -250244786 + L1MA8 LINE L1 6209 6284 -7 2174 108 0 51 chr2 443109 443425 -250244429 - AluSg SINE Alu -10 300 1 373 303 128 0 chr2 444137 444325 -250243529 + MER58C DNA MER1_type 1 212 -3 379 314 78 31 chr2 444971 445264 -250242590 + L1MC/D LINE L1 5501 5807 -2001 209 233 0 0 chr2 448477 448520 -250239334 + (TA)n Simple_repeat Simple_repeat 1 43 0 242 280 86 0 chr2 449199 449292 -250238562 + MER3 DNA MER1_type 79 179 -30 232 337 53 63 chr2 450223 450413 -250237441 - MIR SINE MIR -50 212 25 184 146 24 49 chr2 450781 450822 -250237032 + MER5B DNA MER1_type 124 163 -15 228 69 92 11 chr2 451573 451660 -250236194 + (TG)n Simple_repeat Simple_repeat 2 95 0 2545 111 14 0 chr2 452537 452896 -250234958 + THE1B LTR MaLR 1 364 0 663 300 55 40 chr2 454626 455026 -250232828 + MLT2D LTR ERVL 9 414 0 1606 201 57 52 chr2 458352 458759 -250229095 + LTR2 LTR ERV1 41 449 0 225 0 0 0 chr2 462723 462748 -250225106 + (T)n Simple_repeat Simple_repeat 1 25 0 371 329 150 31 chr2 462848 463207 -250224647 - L1M4 LINE L1 -1097 5049 4648 684 287 59 53 chr2 463253 463374 -250224480 - L1M4 LINE L1 -1635 4511 4392 6207 58 17 18 chr2 463374 464155 -250223699 - LTR17 LTR ERV1 0 780 1 684 287 59 53 chr2 464155 464709 -250223145 - L1M4 LINE L1 -1754 4392 3832 531 276 104 21 chr2 464705 465089 -250222765 - L1M4 LINE L1 -3529 2617 2202 * 3251 110 69 6 chr2 465767 466248 -250221606 + MER9 LTR ERVK 1 511 0 185 371 0 0 chr2 467320 467382 -250220472 + L2 LINE L2 3005 3066 -206 23 0 0 0 chr2 469252 469275 -250218579 + AT_rich Low_complexity Low_complexity 1 23 0 972 124 0 0 chr2 470235 470364 -250217490 + AluSq/x SINE Alu 1 129 -183 416 296 85 0 chr2 472381 472570 -250215284 - MER92B LTR ERV1 -421 215 11 2773 141 20 50 chr2 472668 473229 -250214625 - Tigger3(Golem) DNA MER2_type -1 3028 2485 261 182 0 0 chr2 473330 473385 -250214469 + GA-rich Low_complexity Low_complexity 4 58 0 704 184 101 10 chr2 473475 473682 -250214172 - MER33 DNA MER1_type -48 276 51 2351 92 0 13 chr2 474192 474496 -250213358 + AluSx SINE Alu 1 300 -12 21 36 0 0 chr2 475850 475878 -250211976 + GC_rich Low_complexity Low_complexity 1 28 0 195 69 0 0 chr2 475904 475933 -250211921 + (CGGGG)n Simple_repeat Simple_repeat 5 33 0 409 247 54 75 chr2 479866 480052 -250207802 + MER58C DNA MER1_type 28 209 -6 591 129 0 0 chr2 480901 480986 -250206868 + AluSg/x SINE Alu 208 292 -18 303 288 55 43 chr2 481834 481997 -250205857 - L2 LINE L2 -491 2823 2659 288 295 98 16 chr2 482048 482292 -250205562 + L1M4 LINE L1 2994 3257 -2889 24 32 0 0 chr2 482357 482388 -250205466 + AT_rich Low_complexity Low_complexity 1 31 0 426 333 56 59 chr2 482545 482833 -250205021 + L1MEc LINE L1 2099 2385 -4011 439 253 120 71 chr2 483072 483440 -250204414 - L1 LINE L1 -3126 3020 2635 282 260 153 45 chr2 483605 483913 -250203941 + L1M4 LINE L1 3884 4224 -1922 460 346 93 12 chr2 483962 484219 -250203635 + L1M4 LINE L1 4483 4760 -1386 306 129 32 32 chr2 484473 484597 -250203257 + (TTAA)n Simple_repeat Simple_repeat 4 127 0 266 332 45 31 chr2 484751 485040 -250202814 + MER97c DNA MER1_type? 781 1073 -17 246 141 54 11 chr2 485217 485309 -250202545 + (TAGA)n Simple_repeat Simple_repeat 2 97 0 350 137 99 19 chr2 485335 485496 -250202358 + (TAGA)n Simple_repeat Simple_repeat 2 175 0 195 119 34 34 chr2 485569 485628 -250202226 + (TAGA)n Simple_repeat Simple_repeat 3 61 0 2054 156 6 22 chr2 488738 489059 -250198795 - MER1B DNA MER1_type -23 316 1 860 203 183 40 chr2 489059 489308 -250198546 - Tigger3(Golem) DNA MER2_type -2741 288 4 218 306 9 4 chr2 490453 490689 -250197165 + (CA)n Simple_repeat Simple_repeat 1 237 0 269 309 6 0 chr2 490741 490916 -250196938 + (CATA)n Simple_repeat Simple_repeat 2 177 0 434 263 6 0 chr2 490932 491092 -250196762 + (CA)n Simple_repeat Simple_repeat 2 162 0 307 250 14 0 chr2 492699 492771 -250195083 - MER69 DNA AcHobo 0 2526 2454 209 301 88 18 chr2 496509 496622 -250191232 - MIR SINE MIR -60 148 28 1378 139 8 36 chr2 496622 496874 -250190980 + AluJb SINE Alu 58 302 -10 340 270 63 8 chr2 497081 497207 -250190647 + MLT1I LTR MaLR 270 402 -7 864 206 73 5 chr2 501418 501636 -250186218 - L1MA5A LINE L1 -1 6296 6064 253 319 66 58 chr2 502277 502491 -250185363 - L1M4 LINE L1 -1548 4598 4387 2490 48 0 0 chr2 502491 502802 -250185052 + AluYa5 SINE Alu 1 311 0 253 319 66 58 chr2 502802 503039 -250184815 - L1M4 LINE L1 -1759 4387 4143 538 262 117 41 chr2 504425 504917 -250182937 - L1MDa LINE L1 -4511 2029 1543 745 283 125 69 chr2 505150 505758 -250182096 - L1MDa LINE L1 -5426 1104 463 197 305 84 21 chr2 505794 505889 -250181965 - MIR SINE MIR -91 171 71 2695 101 3 3 chr2 506200 506575 -250181279 + THE1C LTR MaLR 1 375 0 1567 234 39 8 chr2 507492 507856 -250179998 - MLT1B LTR MaLR -15 375 1 281 274 89 24 chr2 508033 508157 -250179697 + MIR SINE MIR 117 248 -14 1618 139 204 38 chr2 508355 508722 -250179132 + MSTA LTR MaLR 1 428 0 7593 171 40 67 chr2 508722 510417 -250177437 + THE1B-int LTR MaLR 1 1649 -2 1698 161 75 32 chr2 510425 510772 -250177082 + THE1B LTR MaLR 1 362 -2 198 0 0 0 chr2 511225 511247 -250176607 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 884 222 13 3 chr2 511679 511994 -250175860 - MSTD LTR MaLR 0 396 1 403 233 78 0 chr2 512519 512635 -250175219 + MLT1D LTR MaLR 381 505 0 1927 110 10 52 chr2 512759 513067 -250174787 + AluSg SINE Alu 1 295 -15 188 132 0 26 chr2 516398 516436 -250171418 + (GAAAA)n Simple_repeat Simple_repeat 2 38 0 432 285 75 5 chr2 516863 517063 -250170791 + MER20 DNA MER1_type 6 219 0 1832 143 62 20 chr2 517738 518095 -250169759 + THE1C LTR MaLR 1 372 -3 24 32 0 0 chr2 518976 519007 -250168847 + AT_rich Low_complexity Low_complexity 1 31 0 407 307 72 23 chr2 521147 521411 -250166443 - L1ME4a LINE L1 -295 5826 5550 241 272 48 0 chr2 521482 521607 -250166247 - L1ME4a LINE L1 -2350 5458 5328 235 200 36 0 chr2 521769 521824 -250166030 - LTR40b LTR ERVL -2 460 404 281 365 11 11 chr2 523573 523751 -250164103 + (CA)n Simple_repeat Simple_repeat 2 179 0 2206 92 0 7 chr2 523926 524229 -250163625 - AluSx SINE Alu -11 301 1 2718 208 69 60 chr2 525573 526328 -250161526 - L1MC1 LINE L1 -1 6332 5571 828 151 0 0 chr2 526328 526474 -250161380 + CT-rich Low_complexity Low_complexity 3 148 0 506 190 8 0 chr2 526968 527089 -250160765 + GA-rich Low_complexity Low_complexity 3 124 0 222 37 0 0 chr2 527688 527715 -250160139 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 430 301 47 21 chr2 528439 528828 -250159026 + L1MEc LINE L1 1371 1823 -753 737 240 179 28 chr2 529046 529371 -250158483 + MLT1B LTR MaLR 1 374 -16 205 162 0 101 chr2 529475 529574 -250158280 + A-rich Low_complexity Low_complexity 2 90 0 434 281 42 32 chr2 530066 530578 -250157276 - MLT1G1 LTR MaLR -2 593 2 187 246 33 0 chr2 531053 531114 -250156740 + L2 LINE L2 3028 3090 -223 228 193 53 0 chr2 531311 531368 -250156486 - MIR SINE MIR -79 183 124 555 273 88 10 chr2 531723 531917 -250155937 - L1PB4 LINE L1 -6 6150 5942 219 264 31 92 chr2 532446 532609 -250155245 - L2 LINE L2 -52 3261 3109 584 135 19 19 chr2 534355 534459 -250153395 + L1MA4 LINE L1 6197 6300 0 214 294 29 0 chr2 539172 539240 -250148614 + CT-rich Low_complexity Low_complexity 3 72 0 346 264 36 43 chr2 539453 539476 -250148378 - L1M4 LINE L1 -3619 2527 2505 2278 188 43 8 chr2 539476 539945 -250147909 - MER66B LTR ERV1 -1 485 1 346 264 36 43 chr2 539945 540061 -250147793 - L1M4 LINE L1 -3641 2505 2389 258 248 152 41 chr2 540108 540253 -250147601 - L1P LINE L1 -3839 2307 2147 44 20 0 0 chr2 540864 540915 -250146939 + AT_rich Low_complexity Low_complexity 1 51 0 717 224 108 108 chr2 540915 541163 -250146691 - L1MC5 LINE L1 -79 7882 7635 2175 128 0 0 chr2 541163 541459 -250146395 - AluSx SINE Alu -16 296 1 717 224 108 108 chr2 541459 541847 -250146007 - L1MC5 LINE L1 -325 7636 7246 26 50 0 0 chr2 542132 542172 -250145682 + AT_rich Low_complexity Low_complexity 1 40 0 1211 166 67 9 chr2 543025 543248 -250144606 + MER46A DNA MER2_type 1 236 0 1670 221 195 44 chr2 543536 544289 -250143565 - Charlie1a DNA MER1_type -34 1421 555 273 283 146 34 chr2 544385 544618 -250143236 - Charlie1a DNA MER1_type -1054 401 143 657 236 28 34 chr2 544674 544852 -250143002 - Charlie1a DNA MER1_type -1277 178 2 239 212 26 13 chr2 544883 544991 -250142863 - L1P LINE L1 -2364 3782 3672 308 268 132 64 chr2 545615 545880 -250141974 - L1MEc LINE L1 -3188 3376 3094 214 175 35 18 chr2 546469 546526 -250141328 + (TCTCTG)n Simple_repeat Simple_repeat 3 60 0 361 296 103 57 chr2 546909 547277 -250140577 - L1MEc LINE L1 -4751 1994 1610 22 56 0 0 chr2 552715 552751 -250135103 + AT_rich Low_complexity Low_complexity 1 36 0 772 182 0 0 chr2 553847 553990 -250133864 + MER52A LTR ERV1 1613 1755 0 1818 164 125 3 chr2 554177 554536 -250133318 + MER57A LTR ERV1 1 403 0 3484 233 81 22 chr2 558138 559193 -250128661 - L1MC3 LINE L1 -166 7619 6503 2196 257 44 28 chr2 559181 559982 -250127872 - L1MCb LINE L1 -3034 3530 2717 * 1081 237 59 75 chr2 560008 560701 -250127153 - L1MCb LINE L1 -4849 1196 704 281 342 35 0 chr2 560758 560986 -250126868 + L1ME LINE L1 3340 3575 -2571 1198 94 0 0 chr2 560988 561148 -250126706 - L1PA7 LINE L1 -390 5764 5605 2959 60 5 21 chr2 561148 561546 -250126308 + L1PA7 LINE L1 5763 6158 0 896 282 119 31 chr2 561759 562642 -250125212 + L1ME LINE L1 3847 4807 -1339 589 190 0 0 chr2 562691 562812 -250125042 - L1PB1 LINE L1 -1588 4558 4438 * 5853 147 83 1 chr2 562808 563400 -250124454 + L1PB1 LINE L1 4553 5095 -1056 6075 71 84 14 chr2 563400 563474 -250124380 + L1PA8 LINE L1 5254 5321 -851 2343 92 0 38 chr2 563474 563611 -250124243 + AluSx SINE Alu 1 142 -170 3173 201 23 91 chr2 563611 564651 -250123203 - LTR5 LTR ERVK 0 969 1 2343 92 0 38 chr2 564651 564830 -250123024 + AluSx SINE Alu 142 305 -7 6075 71 84 14 chr2 564830 565610 -250122244 + L1PA8 LINE L1 5321 6168 -4 5853 147 83 1 chr2 565610 566471 -250121383 + L1PB1 LINE L1 5095 6143 -8 589 308 78 30 chr2 566834 567195 -250120659 + L1ME LINE L1 5276 5653 -509 242 285 85 8 chr2 567742 567872 -250119982 + L2 LINE L2 2154 2293 -1021 188 337 79 34 chr2 567985 568163 -250119691 + L2 LINE L2 3128 3313 0 1870 224 55 60 chr2 570247 570886 -250116968 - L1MB3 LINE L1 -14 6169 5534 303 286 7 82 chr2 571341 571488 -250116366 - L1M3 LINE L1 -586 5585 5450 1519 199 36 28 chr2 571593 571955 -250115899 + MLT1A1 LTR MaLR 1 365 0 298 333 27 0 chr2 572154 572265 -250115589 - L1MC5 LINE L1 -50 7911 7798 2264 261 72 42 chr2 572317 573392 -250114462 - L1M3 LINE L1 -2180 3966 2860 200 206 95 0 chr2 776065 776128 -249911726 - L2 LINE L2 -7 3306 3238 2565 37 0 0 chr2 776587 776885 -249910969 - AluY SINE Alu -13 298 1 300 203 40 0 chr2 776886 776960 -249910894 - MER69 DNA AcHobo -2370 156 80 27 0 0 0 chr2 777426 777453 -249910401 + AT_rich Low_complexity Low_complexity 1 27 0 663 168 19 0 chr2 777971 778078 -249909776 - FLAM_C SINE Alu -33 110 2 416 298 21 47 chr2 778726 778917 -249908937 + MER3 DNA MER1_type 24 209 0 335 323 168 0 chr2 778934 779089 -249908765 + MER5A DNA MER1_type 6 186 -3 212 306 72 39 chr2 780769 780949 -249906905 + L2 LINE L2 3083 3268 -4 204 289 0 19 chr2 780939 780991 -249906863 + MER5A DNA MER1_type 137 187 -2 * 1375 220 18 23 chr2 782165 782525 -249905329 - MLT1F LTR MaLR -81 461 15 477 335 24 0 chr2 782542 782706 -249905148 - MLT1F LTR MaLR -365 177 10 198 288 0 30 chr2 782801 782867 -249904987 - L2 LINE L2 -10 3262 3199 367 296 128 24 chr2 783101 783561 -249904293 - MLT1E LTR MaLR 0 593 13 948 149 0 0 chr2 783666 783807 -249904047 - FRAM SINE Alu -17 159 19 341 282 35 14 chr2 787236 787378 -249900476 + MIR3 SINE MIR 39 183 -25 311 174 149 8 chr2 787755 787876 -249899978 + L1M3 LINE L1 5707 5844 -339 398 318 26 75 chr2 788122 788209 -249899645 - L2 LINE L2 -61 3252 3162 2273 75 0 0 chr2 788209 788491 -249899363 - AluSp SINE Alu -23 290 9 398 318 26 75 chr2 788491 788752 -249899102 - L2 LINE L2 -151 3162 2921 2320 97 0 0 chr2 789001 789310 -249898544 - AluSx SINE Alu -3 309 1 2193 102 0 16 chr2 789489 789626 -249898228 + AluSx SINE Alu 1 139 -173 2112 98 0 29 chr2 789626 789933 -249897921 + AluSg SINE Alu 1 298 -12 2193 102 0 16 chr2 789933 790108 -249897746 + AluSx SINE Alu 139 308 -4 565 305 158 10 chr2 790115 790508 -249897346 - L2 LINE L2 -770 2544 2094 943 154 46 6 chr2 790954 791129 -249896725 - MER20 DNA MER1_type -1 218 37 939 223 79 48 chr2 791225 791580 -249896274 + MER69 DNA AcHobo 1919 2284 -242 2188 98 3 13 chr2 791587 791894 -249895960 + AluY SINE Alu 1 304 -7 313 91 0 106 chr2 791938 792004 -249895850 - L1MD1 LINE L1 0 6242 6184 3138 236 55 15 chr2 792011 792458 -249895396 - L1MD1 LINE L1 -86 6156 5728 1379 97 111 0 chr2 792458 792665 -249895189 - MER30 DNA MER1_type 0 230 1 3138 236 55 15 chr2 792665 792789 -249895065 - L1MD1 LINE L1 -514 5728 5610 2173 104 3 3 chr2 792789 793098 -249894756 - AluSc SINE Alu 0 309 1 3138 236 55 15 chr2 793098 793840 -249894014 - L1MD1 LINE L1 -632 5610 4789 2213 83 7 0 chr2 796029 796318 -249891536 - AluY SINE Alu -19 292 2 256 197 15 15 chr2 797356 797422 -249890432 + G-rich Low_complexity Low_complexity 2 67 0 337 349 54 12 chr2 798064 798230 -249889624 - L3 LINE CR1 -213 1364 1192 412 219 8 55 chr2 798361 798489 -249889365 + MLT1A2 LTR MaLR 19 140 -234 2264 103 0 3 chr2 798867 799178 -249888676 - AluSq SINE Alu -3 310 1 822 173 0 0 chr2 799970 800103 -249887751 + FLAM_C SINE Alu 1 133 0 1804 176 0 3 chr2 800787 800965 -249886889 - AluJo SINE Alu 0 312 134 2299 92 0 0 chr2 800965 801259 -249886595 - AluSq SINE Alu -19 294 1 1804 176 0 3 chr2 801259 801393 -249886461 - AluJo SINE Alu -178 134 1 382 277 54 81 chr2 802250 802510 -249885344 - HAL1 LINE L1 -953 1554 1302 381 248 0 0 chr2 803435 803548 -249884306 + (CA)n Simple_repeat Simple_repeat 1 113 0 189 0 0 0 chr2 803774 803795 -249884059 + (TTTC)n Simple_repeat Simple_repeat 2 22 0 183 318 0 0 chr2 804534 804597 -249883257 - MIR SINE MIR -136 126 64 258 290 131 42 chr2 804636 804836 -249883018 + L1MC/D LINE L1 5600 5830 -1978 1797 155 17 3 chr2 804836 805132 -249882722 + AluJo SINE Alu 1 300 -12 258 290 131 42 chr2 805132 805190 -249882664 + L1MC/D LINE L1 5830 5881 -1927 301 283 5 81 chr2 805298 805496 -249882358 - L1MCa LINE L1 -4361 2065 1883 1314 224 50 42 chr2 805530 805888 -249881966 - MLT1A1 LTR MaLR -4 361 1 1291 131 143 20 chr2 806021 806273 -249881581 - AluJo SINE Alu -29 283 1 2318 100 0 0 chr2 806505 806814 -249881040 - AluSx SINE Alu -3 309 1 256 276 188 33 chr2 807209 807390 -249880464 - MIR SINE MIR -16 246 38 212 292 156 0 chr2 808605 808701 -249879153 - MIR SINE MIR -79 183 73 274 252 44 74 chr2 809239 809374 -249878480 - MIR SINE MIR -62 146 16 1089 0 0 0 chr2 810201 810322 -249877532 + (CA)n Simple_repeat Simple_repeat 1 121 0 183 42 0 0 chr2 810322 810346 -249877508 + (CCCA)n Simple_repeat Simple_repeat 1 24 0 2393 208 60 19 chr2 811682 812102 -249875752 + MER6A DNA MER2_type -10 439 -426 2550 40 0 0 chr2 812102 812402 -249875452 + AluY SINE Alu 1 300 -11 2393 208 60 19 chr2 812402 812555 -249875299 + MER6A DNA MER2_type 439 584 -21 326 333 32 0 chr2 812696 812819 -249875035 - MIR SINE MIR -53 209 83 225 65 0 0 chr2 814309 814340 -249873514 + (TG)n Simple_repeat Simple_repeat 1 31 0 1501 205 59 38 chr2 815201 815733 -249872121 - LTR40a LTR ERVL 0 519 31 705 295 146 35 chr2 815887 816008 -249871846 + MLT1F LTR MaLR 1 107 -435 1893 180 40 30 chr2 816008 816436 -249871418 + MSTB1 LTR MaLR 1 432 0 705 295 146 35 chr2 816436 816802 -249871052 + MLT1F LTR MaLR 107 542 0 770 134 30 37 chr2 816803 816937 -249870917 + FLAM_A SINE Alu 1 133 0 1858 155 0 29 chr2 818478 818788 -249869066 + AluJb SINE Alu 1 301 -11 2267 172 46 0 chr2 819908 820321 -249867533 + MSTB1 LTR MaLR 1 432 0 1929 209 92 20 chr2 820394 820905 -249866949 - LTR10A LTR ERV1 -61 548 1 245 292 73 51 chr2 820936 821073 -249866781 + MIR SINE MIR 14 153 -109 1327 278 89 47 chr2 821644 822242 -249865612 - MLT1E2 LTR MaLR 0 626 4 374 219 42 25 chr2 822477 822596 -249865258 - L1MA4A LINE L1 -1 6302 6182 631 233 8 0 chr2 822632 822765 -249865089 + MER58 DNA MER1_type 116 249 -92 4079 96 28 7 chr2 822924 823487 -249864367 + L1PA11 LINE L1 5600 6174 0 716 249 79 0 chr2 823726 823903 -249863951 + MER3 DNA MER1_type 3 193 -16 1935 164 3 3 chr2 824493 824792 -249863062 + AluJo SINE Alu 1 299 -13 23 33 0 0 chr2 824902 824932 -249862922 + AT_rich Low_complexity Low_complexity 1 30 0 4155 73 15 0 chr2 825200 825745 -249862109 - L1PA10 LINE L1 0 6168 5616 1296 262 46 19 chr2 827196 827627 -249860227 - LTR47B LTR ERVL 0 443 1 659 208 82 76 chr2 828610 828927 -249858927 + MER5C DNA MER1_type 5 323 -1 2499 32 0 0 chr2 829211 829520 -249858334 - AluY SINE Alu 0 310 2 3911 198 51 1 chr2 830085 830449 -249857405 - L1MB8 LINE L1 0 6178 5833 1351 125 83 5 chr2 830449 830665 -249857189 + MER46A DNA MER2_type 2 234 -2 3911 198 51 1 chr2 830665 831110 -249856744 - L1MB8 LINE L1 -345 5833 5329 2654 58 52 14 chr2 831125 831487 -249856367 - L1PB1 LINE L1 -7 7563 7188 777 93 0 19 chr2 831503 831611 -249856243 - L1MA2 LINE L1 -9 6295 6190 10434 156 34 22 chr2 831613 831952 -249855902 - L1PB1 LINE L1 -502 7217 6884 1238 124 180 141 chr2 831952 832363 -249855491 - MSTA LTR MaLR -1 427 1 10434 156 34 22 chr2 832363 834468 -249853386 - L1PB1 LINE L1 -835 6884 4738 5101 193 47 6 chr2 835758 836974 -249850880 - L1PB1 LINE L1 -2826 4739 3462 210 71 0 0 chr2 836974 837002 -249850852 + (CCCCCT)n Simple_repeat Simple_repeat 3 30 0 324 303 66 9 chr2 837234 837445 -249850409 - L1MEd LINE L1 -5306 813 591 24 67 0 0 chr2 838742 838787 -249849067 + AT_rich Low_complexity Low_complexity 1 45 0 237 178 0 0 chr2 838880 838925 -249848929 + (TG)n Simple_repeat Simple_repeat 2 46 0 301 270 72 18 chr2 839166 839277 -249848577 + MIR SINE MIR 28 144 -118 460 296 35 7 chr2 839826 839968 -249847886 + Charlie8 DNA MER1_type 25 170 -2247 371 214 56 0 chr2 841598 841687 -249846167 + MIR SINE MIR 97 190 -72 416 54 36 0 chr2 842483 842539 -249845315 + L1P4 LINE L1 5423 5480 -685 2382 101 18 3 chr2 842549 842887 -249844967 - L1PA11 LINE L1 -2 6172 5830 3443 121 107 10 chr2 842887 843470 -249844384 - L1PA16 LINE L1 -67 6099 5460 3098 79 2 7 chr2 843469 843885 -249843969 + L1PA11 LINE L1 5467 5880 -294 * 286 270 149 29 chr2 843968 844142 -249843712 - L1ME LINE L1 -299 5822 5628 1528 142 130 15 chr2 844737 844998 -249842856 + AluJo SINE Alu 1 291 -21 299 280 0 30 chr2 845980 846080 -249841774 + L1ME LINE L1 5691 5787 -334 227 202 11 85 chr2 846130 846224 -249841630 + MIR SINE MIR 176 262 0 369 268 83 57 chr2 847288 847639 -249840215 - L1ME4a LINE L1 -21 6100 5741 270 295 54 0 chr2 847644 847756 -249840098 - L1ME4a LINE L1 -525 5596 5479 303 28 0 0 chr2 847930 847966 -249839888 + (TCCA)n Simple_repeat Simple_repeat 1 36 0 590 263 205 16 chr2 848080 848392 -249839462 - L2 LINE L2 -9 3304 2934 274 265 0 0 chr2 848464 848532 -249839322 - L2 LINE L2 -681 2633 2566 661 276 167 13 chr2 848537 849077 -249838777 - L2 LINE L2 -1123 2191 1569 1205 162 31 13 chr2 849091 849319 -249838535 - L1MB7 LINE L1 -218 5966 5735 459 339 90 42 chr2 849576 850537 -249837317 + L2 LINE L2 2252 3272 0 4625 190 45 25 chr2 850688 851367 -249836487 - L1M1 LINE L1 -4065 1263 599 1920 156 0 32 chr2 851367 851675 -249836179 - AluJb SINE Alu -14 298 1 4625 190 45 25 chr2 851675 852379 -249835475 - L1M1 LINE L1 -4729 599 727 1448 132 32 0 chr2 852379 852599 -249835255 + MER30 DNA MER1_type 3 229 -1 4625 190 45 25 chr2 852599 852908 -249834946 - L1M1 LINE L1 -4600 728 426 577 292 85 30 chr2 852899 853135 -249834719 - L1M4b LINE L1 -6296 563 315 * 845 197 82 52 chr2 853158 853391 -249834463 - L1M4b LINE L1 -6610 249 10 294 313 17 17 chr2 853669 853784 -249834070 + L2 LINE L2 3188 3302 -11 189 277 43 0 chr2 853792 853839 -249834015 - L2 LINE L2 -87 3185 3137 2158 85 0 11 chr2 853850 854131 -249833723 + AluSq SINE Alu 36 313 0 22 56 0 0 chr2 854926 854962 -249832892 + AT_rich Low_complexity Low_complexity 1 36 0 380 279 72 86 chr2 855284 855728 -249832126 - L2 LINE L2 -5 3308 2871 468 51 0 0 chr2 857722 857781 -249830073 + (TCTA)n Simple_repeat Simple_repeat 2 60 0 2173 112 3 0 chr2 857781 858077 -249829777 - AluSx SINE Alu -15 297 1 2232 99 7 3 chr2 858081 858375 -249829479 - AluSx SINE Alu -17 295 1 1262 244 141 74 chr2 858726 858861 -249828993 - Charlie7 DNA MER1_type -1751 861 736 698 47 0 0 chr2 858861 858970 -249828884 - L1PA4 LINE L1 0 6155 6059 1262 244 141 74 chr2 858970 859134 -249828720 - Charlie7 DNA MER1_type -1876 736 584 5585 118 8 4 chr2 859134 860396 -249827458 - L1PA15 LINE L1 -2 6163 4868 1262 244 141 74 chr2 860396 860902 -249826952 - Charlie7 DNA MER1_type -2028 584 1 213 43 0 65 chr2 863687 863733 -249824121 + (TCCCG)n Simple_repeat Simple_repeat 2 44 0 724 264 120 15 chr2 865151 865477 -249822377 + MLT1B LTR MaLR 1 360 -30 279 262 90 25 chr2 865576 865698 -249822156 + MIR SINE MIR 14 143 -119 916 126 14 0 chr2 866385 866528 -249821326 - HSMAR2 DNA Mariner -419 883 739 2080 103 32 7 chr2 866558 866840 -249821014 - AluSg SINE Alu -4 306 18 4144 117 30 15 chr2 866849 867508 -249820346 + HSMAR2 DNA Mariner 633 1301 -1 404 235 12 29 chr2 867515 867685 -249820169 + (CATATA)n Simple_repeat Simple_repeat 2 168 0 188 256 12 0 chr2 867770 867856 -249819998 + (CATA)n Simple_repeat Simple_repeat 2 88 0 242 191 43 17 chr2 867874 867989 -249819865 + (CATA)n Simple_repeat Simple_repeat 3 120 0 217 228 0 63 chr2 868147 868305 -249819549 + (CATA)n Simple_repeat Simple_repeat 4 151 0 215 264 13 119 chr2 871384 871543 -249816311 - MIR3 SINE MIR -55 153 12 2308 120 0 16 chr2 871885 872202 -249815652 + AluSq SINE Alu 2 313 0 13125 202 48 53 chr2 872962 874948 -249812906 + L1MA9 LINE L1 1 1996 -4380 1980 171 89 30 chr2 874948 875352 -249812502 - MSTC LTR MaLR 0 428 1 13125 202 48 53 chr2 875352 875462 -249812392 + L1MA9 LINE L1 1996 2105 -4271 892 163 106 0 chr2 875462 875622 -249812232 - AluJo/FRAM SINE Alu -3 309 133 2318 95 27 0 chr2 875625 875920 -249811934 - AluSg SINE Alu -7 303 1 13125 202 48 53 chr2 875920 877891 -249809963 + L1MA9 LINE L1 2107 3789 -2587 2390 89 0 0 chr2 877891 878183 -249809671 + AluSx SINE Alu 1 292 -20 13125 202 48 53 chr2 878183 880054 -249807800 + L1MA9 LINE L1 3789 5668 -708 21 82 0 0 chr2 880630 880679 -249807175 + AT_rich Low_complexity Low_complexity 1 49 0 1408 192 25 0 chr2 880685 880971 -249806883 + L1MA9 LINE L1 5657 5949 -427 9767 39 1 183 chr2 881001 882715 -249805139 + SVA Other Other 2 1386 0 1274 247 51 0 chr2 882716 883108 -249804746 - HAL1 LINE L1 -800 1707 1296 304 296 15 67 chr2 883460 883595 -249804259 + L1ME LINE L1 5728 5855 -266 1603 123 36 36 chr2 883599 883852 -249804002 + AluSx SINE Alu 60 312 0 252 305 24 98 chr2 883902 884066 -249803788 - MIR SINE MIR -1 261 110 193 262 164 0 chr2 884111 884172 -249803682 - MIR SINE MIR -65 197 127 219 293 7 30 chr2 885641 885929 -249801925 + C-rich Low_complexity Low_complexity 1 281 0 307 129 86 0 chr2 886015 886085 -249801769 + MER45A DNA AcHobo 81 156 -22 29 0 0 0 chr2 886305 886334 -249801520 + AT_rich Low_complexity Low_complexity 1 29 0 221 246 0 31 chr2 886363 886428 -249801426 + MIR SINE MIR 81 143 -119 326 294 39 0 chr2 886554 886656 -249801198 - MIR3 SINE MIR -7 201 96 2161 125 6 10 chr2 887609 887921 -249799933 + AluSx SINE Alu 1 311 -1 211 204 0 56 chr2 887961 888015 -249799839 + GA-rich Low_complexity Low_complexity 6 56 0 285 273 39 0 chr2 888175 888252 -249799602 - L2 LINE L2 -2 3311 3232 242 0 61 0 chr2 888277 888310 -249799544 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 543 305 121 18 chr2 888576 888973 -249798881 - L2 LINE L2 -613 2701 2264 1852 159 27 3 chr2 889638 889933 -249797921 + AluJb SINE Alu 8 309 -3 343 182 71 50 chr2 890314 890413 -249797441 - L1MC5 LINE L1 -30 7931 7831 1623 163 4 4 chr2 890694 890952 -249796902 - AluJb SINE Alu -54 258 1 2357 95 0 0 chr2 890967 891271 -249796583 - AluY SINE Alu -7 304 1 223 315 194 6 chr2 891560 891725 -249796129 + MIR SINE MIR 55 250 -12 268 319 43 49 chr2 892028 892191 -249795663 - MIR3 SINE MIR -41 167 6 268 147 0 147 chr2 892937 892989 -249794865 + MER45A DNA AcHobo 71 110 -1471 2287 113 0 0 chr2 892989 893322 -249794532 + AluSq SINE Alu 1 313 0 268 147 0 147 chr2 893322 893344 -249794510 + MER45A DNA AcHobo 110 134 -44 2125 125 7 7 chr2 894588 894892 -249792962 + AluSx SINE Alu 1 304 -8 569 165 75 75 chr2 896689 896901 -249790953 - MER69 DNA AcHobo -3 2523 2312 3778 255 30 34 chr2 896925 897860 -249789994 + L1M4 LINE L1 3371 4308 -1838 2228 128 0 0 chr2 897860 898166 -249789688 + AluSx SINE Alu 1 306 -6 3778 255 30 34 chr2 898166 898382 -249789472 + L1M4 LINE L1 4308 4519 -1627 1907 153 27 10 chr2 898382 898683 -249789171 + AluJb SINE Alu 3 308 -4 3778 255 30 34 chr2 898683 898885 -249788969 + L1M4 LINE L1 4519 4720 -1426 3897 71 4 21 chr2 898929 899489 -249788365 + SVA Other Other 2 551 -835 634 146 73 0 chr2 899939 900049 -249787805 - LTR12 LTR ERV1 -234 480 363 559 149 0 141 chr2 900049 900197 -249787657 - pTR5 LTR ERV1 -570 1528 55 266 211 0 0 chr2 900201 900253 -249787601 - LTR30 LTR ERV1 -670 52 1 2313 94 3 3 chr2 900296 900594 -249787260 - AluY SINE Alu -13 298 1 683 232 26 0 chr2 901844 901999 -249785855 - L1M4 LINE L1 -2229 3917 3759 1478 235 57 2 chr2 902019 902474 -249785380 - L1M4 LINE L1 -2545 3601 3122 426 182 65 0 chr2 902796 902873 -249784981 + THE1B LTR MaLR 1 82 -282 2078 114 9 24 chr2 902879 903211 -249784643 + THE1B LTR MaLR 38 364 0 735 259 45 53 chr2 903220 903463 -249784391 - MIR SINE MIR -17 245 5 276 335 180 0 chr2 903524 903685 -249784169 + MIR SINE MIR 58 247 -15 518 302 124 24 chr2 904345 905137 -249782717 - L2 LINE L2 0 3272 2325 195 125 0 0 chr2 905169 905209 -249782645 + (TG)n Simple_repeat Simple_repeat 1 40 0 355 324 45 73 chr2 905226 905476 -249782378 - MIR SINE MIR -17 245 4 196 268 110 39 chr2 908943 909070 -249778784 + MIR SINE MIR 51 186 -76 195 278 130 19 chr2 910128 910236 -249777618 + MIR SINE MIR 16 135 -127 1564 196 43 3 chr2 910565 911146 -249776708 - MER67B LTR ERV1 -1 660 10 814 181 0 0 chr2 911374 911507 -249776347 + FLAM_C SINE Alu 1 133 0 3109 109 17 11 chr2 911622 912090 -249775764 - LTR3b LTR ERVK -29 471 1 21 36 0 0 chr2 913627 913655 -249774199 + AT_rich Low_complexity Low_complexity 1 28 0 1670 199 28 25 chr2 914694 915051 -249772803 - MLT1A1 LTR MaLR -7 358 1 31 26 0 0 chr2 916432 916470 -249771384 + AT_rich Low_complexity Low_complexity 1 38 0 1847 55 13 0 chr2 916470 916706 -249771148 - L1PA4 LINE L1 0 6155 5917 240 175 0 0 chr2 917933 917973 -249769881 - MER67B LTR ERV1 -621 40 1 266 196 228 22 chr2 918306 918398 -249769456 - L2 LINE L2 -19 3253 3143 207 379 48 0 chr2 918826 918929 -249768925 + MIR SINE MIR 81 188 -74 31 0 0 0 chr2 919267 919298 -249768556 + AT_rich Low_complexity Low_complexity 1 31 0 261 0 0 0 chr2 919748 919777 -249768077 + (A)n Simple_repeat Simple_repeat 1 29 0 4387 118 57 50 chr2 920464 921241 -249766613 + LTR1 LTR ERV1 1 782 -3 748 262 96 17 chr2 921324 921668 -249766186 - L1ME4a LINE L1 -251 5870 5500 1016 109 0 7 chr2 922672 922810 -249765044 + LTR1 LTR ERV1 648 784 -1 224 219 0 0 chr2 922893 922934 -249764920 + (CA)n Simple_repeat Simple_repeat 1 41 0 316 222 152 30 chr2 923439 923538 -249764316 - L2 LINE L2 0 3313 3203 516 294 123 11 chr2 923746 923933 -249763921 + MIR SINE MIR 55 262 0 3036 242 18 5 chr2 924231 924990 -249762864 + L1 LINE L1 2258 3026 -3120 1572 61 0 5 chr2 924991 925189 -249762665 + AluSq SINE Alu 1 197 -116 200 288 88 25 chr2 925257 925417 -249762437 - L2 LINE L2 -2007 1307 1138 213 39 0 0 chr2 926187 926213 -249761641 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1811 137 4 0 chr2 926219 926490 -249761364 - AluSq SINE Alu -41 272 1 994 158 11 16 chr2 926948 927131 -249760723 - AluJo SINE Alu -44 268 87 201 254 15 75 chr2 927805 927872 -249759982 - L2 LINE L2 -24 3289 3227 438 337 151 12 chr2 928912 929256 -249758598 - L2 LINE L2 -1 3312 2921 369 300 139 43 chr2 929317 929937 -249757917 - L2 LINE L2 -508 2806 2128 193 383 0 12 chr2 929964 930045 -249757809 + L2 LINE L2 3108 3187 -85 794 329 88 61 chr2 931541 932361 -249755493 - HAL1 LINE L1 -726 1781 940 322 327 64 0 chr2 932686 932842 -249755012 + MER5A DNA MER1_type 1 166 -23 250 303 0 11 chr2 936266 936444 -249751410 + (TG)n Simple_repeat Simple_repeat 1 176 0 309 333 20 0 chr2 936459 936558 -249751296 + (CATG)n Simple_repeat Simple_repeat 4 104 0 282 211 0 0 chr2 936561 936618 -249751236 + MER4-int LTR ERV1 1111 1167 -5431 302 264 73 0 chr2 936618 936728 -249751126 + (CATG)n Simple_repeat Simple_repeat 1 118 0 374 232 17 22 chr2 936732 936913 -249750941 + (TATG)n Simple_repeat Simple_repeat 1 180 0 308 287 0 11 chr2 936935 937116 -249750738 + (TATG)n Simple_repeat Simple_repeat 2 180 0 267 260 0 0 chr2 937205 937301 -249750553 + (TG)n Simple_repeat Simple_repeat 1 96 0 444 369 56 13 chr2 937649 937882 -249749972 + L2 LINE L2 997 1239 -2075 360 250 20 66 chr2 937882 938034 -249749820 - L1 LINE L1 -2342 3804 3660 1097 303 85 5 chr2 939393 939815 -249748039 + HsTC2 DNA Tc2 1 456 -1442 258 296 107 45 chr2 939836 940079 -249747775 - MLT1H LTR MaLR -20 529 272 246 200 100 93 chr2 940081 940221 -249747633 - MLT1H LTR MaLR -408 141 1 231 114 0 0 chr2 940230 940265 -249747589 + HsTC2 DNA Tc2 463 497 -1401 938 264 25 16 chr2 940365 940683 -249747171 + HsTC2 DNA Tc2 1573 1893 -5 4643 47 2 0 chr2 941503 942059 -249745795 + L1PA8 LINE L1 5612 6168 -4 216 97 0 0 chr2 942577 942608 -249745246 + (TG)n Simple_repeat Simple_repeat 1 31 0 2083 151 87 25 chr2 943584 943987 -249743867 - MSTA LTR MaLR 0 428 1 843 109 8 8 chr2 945770 945889 -249741965 + THE1B LTR MaLR 246 364 0 1062 201 99 48 chr2 945925 946239 -249741615 + L1MC4 LINE L1 7543 7872 -170 239 206 88 0 chr2 946248 946316 -249741538 + L1MC4 LINE L1 7835 7908 -134 185 231 0 0 chr2 946435 946474 -249741380 - L2 LINE L2 -1 3271 3233 576 240 35 85 chr2 946835 947093 -249740761 - L2 LINE L2 -5 3308 3064 393 102 0 0 chr2 947478 947537 -249740317 + (CA)n Simple_repeat Simple_repeat 1 59 0 1076 210 262 0 chr2 948061 948389 -249739465 + MER47B DNA MER2_type 1 414 -4 1979 146 0 0 chr2 949774 950076 -249737778 - AluSx SINE Alu -10 302 1 384 311 43 25 chr2 950850 951011 -249736843 + L2 LINE L2 3103 3266 -6 230 250 48 39 chr2 952664 952768 -249735086 - MER103 DNA DNA -39 127 23 29 60 0 0 chr2 954491 954541 -249733313 + AT_rich Low_complexity Low_complexity 1 50 0 180 196 98 20 chr2 954707 954758 -249733096 + L3 LINE CR1 1355 1409 -168 407 314 65 40 chr2 955474 955722 -249732132 - MLT1L LTR MaLR 0 615 362 2036 120 10 3 chr2 955966 956267 -249731587 - AluSq SINE Alu -10 303 1 333 281 105 91 chr2 956317 957230 -249730624 - L1M2 LINE L1 -5584 1265 340 552 334 116 59 chr2 957271 958730 -249729124 + L2 LINE L2 1472 3272 0 336 299 133 33 chr2 959080 959291 -249728563 + MLT1I LTR MaLR 37 268 -141 218 337 174 0 chr2 962615 962701 -249725153 + L2 LINE L2 3158 3258 -14 1475 185 16 33 chr2 962825 963128 -249724726 + AluJo SINE Alu 4 301 -11 502 290 36 36 chr2 963202 963395 -249724459 - L1MB3 LINE L1 -9 6174 5982 2252 87 0 3 chr2 963723 964023 -249723831 - AluY SINE Alu -12 299 1 192 135 0 0 chr2 964460 964497 -249723357 + (GGGAGA)n Simple_repeat Simple_repeat 4 40 0 230 256 24 32 chr2 965234 965359 -249722495 + L1MC4a LINE L1 5305 5428 -2380 22 80 0 0 chr2 965653 965703 -249722151 + AT_rich Low_complexity Low_complexity 1 50 0 201 121 0 0 chr2 965713 965746 -249722108 + (GGGAGA)n Simple_repeat Simple_repeat 4 36 0 29 47 0 0 chr2 965801 965844 -249722010 + AT_rich Low_complexity Low_complexity 1 43 0 424 265 34 34 chr2 965853 966057 -249721797 + L1MC4a LINE L1 5729 5932 -1876 228 313 0 0 chr2 967323 967387 -249720467 + MIR SINE MIR 42 105 -103 304 244 105 27 chr2 967853 968007 -249719847 + MIR SINE MIR 88 262 0 405 155 10 19 chr2 969344 969447 -249718407 + CT-rich Low_complexity Low_complexity 3 104 0 1318 133 133 48 chr2 969447 969717 -249718137 - AluSx SINE Alu -19 293 1 2392 68 3 7 chr2 971392 971688 -249716166 + AluY SINE Alu 1 295 -16 22 35 0 0 chr2 973082 973111 -249714743 + AT_rich Low_complexity Low_complexity 1 29 0 2218 152 44 29 chr2 974459 974913 -249712941 - Charlie1a DNA MER1_type -356 1099 639 43795 35 21 1 chr2 974930 980960 -249706894 - L1PA3 LINE L1 0 6155 1 2203 244 41 14 chr2 980963 981550 -249706304 - Charlie1a DNA MER1_type -804 651 49 353 282 29 0 chr2 981550 981653 -249706201 - Charlie1a DNA MER1_type -1343 112 7 1114 219 11 6 chr2 983034 983332 -249704522 - MLT1A2 LTR MaLR -16 358 16 185 303 32 58 chr2 984623 984778 -249703076 + L2 LINE L2 3161 3311 -2 1145 165 176 24 chr2 986444 986699 -249701155 - AluJo SINE Alu -8 294 1 2195 110 0 20 chr2 987109 987410 -249700444 - AluSg SINE Alu -15 295 1 3070 236 91 30 chr2 988129 988961 -249698893 - L1ME1 LINE L1 0 6961 6182 1940 113 0 0 chr2 988961 989217 -249698637 - AluSc SINE Alu -17 292 37 3070 236 91 30 chr2 989217 990182 -249697672 - L1ME1 LINE L1 -779 6182 5050 21670 112 12 8 chr2 990189 993603 -249694251 - L1PA8A LINE L1 -12 6770 3371 261 0 0 0 chr2 993603 993632 -249694222 + (TA)n Simple_repeat Simple_repeat 1 29 0 2103 121 13 3 chr2 993632 993930 -249693924 - AluSg SINE Alu -9 301 1 21670 112 12 8 chr2 993930 994651 -249693203 - L1PA8A LINE L1 -3410 3372 2627 2100 172 31 21 chr2 994648 995208 -249692646 - L1PA8A LINE L1 -4559 2228 1668 * 5973 98 28 18 chr2 995201 996057 -249691797 - L1PA8A LINE L1 -5008 1203 339 1988 96 55 9 chr2 996112 996495 -249691359 - LTR7 LTR ERV1 0 450 1 3623 113 20 16 chr2 996495 997050 -249690804 - HERVH LTR ERV1 0 7713 7157 1659 122 16 0 chr2 997042 997296 -249690558 - HERVH LTR ERV1 -1696 6017 5760 * 5033 121 2 2 chr2 997292 998021 -249689833 - HERVH LTR ERV1 -3001 4712 3995 18715 143 9 27 chr2 998034 1001513 -249686341 - HERVH LTR ERV1 -3979 3734 1 2074 105 31 8 chr2 1001513 1001904 -249685950 - LTR7 LTR ERV1 0 450 1 1296 227 84 27 chr2 1001904 1002310 -249685544 - L1ME1 LINE L1 -1928 5013 4585 431 119 15 0 chr2 1002309 1002376 -249685478 - L1MD3 LINE L1 -1188 6807 6740 * 1751 192 48 0 chr2 1002404 1002758 -249685096 - L1MB7 LINE L1 -26 6158 5788 * 3321 229 54 25 chr2 1002755 1003336 -249684518 - L1ME1 LINE L1 -2569 4372 3809 2246 122 48 14 chr2 1003336 1003688 -249684166 + THE1B LTR MaLR 1 364 0 3321 229 54 25 chr2 1003688 1004211 -249683643 - L1ME1 LINE L1 -3132 3809 3236 322 234 35 21 chr2 1004196 1004341 -249683513 - L1ME1 LINE L1 -4617 2324 2178 * 445 282 20 63 chr2 1004363 1004436 -249683418 - L1ME1 LINE L1 -4888 1535 1460 854 256 42 0 chr2 1004436 1004651 -249683203 - MER58A DNA MER1_type 0 224 1 445 282 20 63 chr2 1004651 1004829 -249683025 - L1ME1 LINE L1 -4963 1460 1295 870 245 50 0 chr2 1004829 1005029 -249682825 - MER58A DNA MER1_type 0 224 15 1383 218 116 9 chr2 1005029 1005460 -249682394 - L1ME1 LINE L1 -5140 1283 807 855 307 115 23 chr2 1005497 1006054 -249681800 - L1ME1 LINE L1 -5755 668 61 257 167 17 50 chr2 1007082 1007142 -249680712 - MIR SINE MIR -121 141 84 514 111 0 20 chr2 1007441 1007540 -249680314 + (TCCC)n Simple_repeat Simple_repeat 2 98 0 1707 218 9 14 chr2 1011814 1012162 -249675692 - MER7A DNA MER2_type 0 346 3 215 360 9 9 chr2 1012288 1012399 -249675455 + MIR SINE MIR 34 144 -64 295 286 181 29 chr2 1013157 1013328 -249674526 - L3 LINE CR1 -319 1258 1062 2073 200 30 30 chr2 1013423 1013923 -249673931 - MLT1D LTR MaLR -2 503 4 2146 162 21 72 chr2 1014564 1015034 -249672820 - L1MC1 LINE L1 0 6333 5888 282 298 96 40 chr2 1015425 1015623 -249672231 - MIR SINE MIR -23 239 31 21 0 0 0 chr2 1016277 1016298 -249671556 + AT_rich Low_complexity Low_complexity 1 21 0 1913 167 0 0 chr2 1016314 1016607 -249671247 - AluJo SINE Alu -19 293 1 2288 190 36 73 chr2 1016647 1017144 -249670710 + L1MD3 LINE L1 7419 7892 -103 2490 57 0 0 chr2 1017144 1017440 -249670414 + AluY SINE Alu 1 296 -15 2288 190 36 73 chr2 1017440 1017531 -249670323 + L1MD3 LINE L1 7892 7985 -10 489 309 68 4 chr2 1017825 1018077 -249669777 - L2 LINE L2 -1332 1982 1715 337 154 0 0 chr2 1018254 1018306 -249669548 - MER20 DNA MER1_type 0 219 168 862 271 298 16 chr2 1018313 1019015 -249668839 - L2 LINE L2 -1696 1618 1115 279 0 0 0 chr2 1019015 1019046 -249668808 + (GA)n Simple_repeat Simple_repeat 2 32 0 862 271 298 16 chr2 1019046 1019319 -249668535 - L2 LINE L2 -2199 1115 368 313 261 11 23 chr2 1019330 1019418 -249668436 + L1ME LINE L1 5582 5668 -453 29 28 0 0 chr2 1019557 1019593 -249668261 + AT_rich Low_complexity Low_complexity 1 36 0 456 287 223 16 chr2 1021490 1021737 -249666117 + Tigger8 DNA MER2_type 29 326 -340 190 106 43 0 chr2 1021939 1021986 -249665868 + (TTATA)n Simple_repeat Simple_repeat 5 53 0 429 263 227 10 chr2 1022116 1022314 -249665540 - L2 LINE L2 0 3272 3032 181 252 133 22 chr2 1022498 1022633 -249665221 - MIR SINE MIR -52 210 61 441 249 64 77 chr2 1023168 1023503 -249664351 - MLT1J2 LTR MaLR -3 416 89 240 223 277 0 chr2 1025715 1025827 -249662027 + MIR SINE MIR 112 254 -8 327 388 25 0 chr2 1026366 1026487 -249661367 + MIR SINE MIR 22 145 -63 346 286 54 65 chr2 1026495 1026680 -249661174 - MIR3 SINE MIR -6 202 20 445 220 17 12 chr2 1026680 1026853 -249661001 + CT-rich Low_complexity Low_complexity 3 176 0 917 154 149 0 chr2 1026855 1027030 -249660824 - AluJo SINE Alu -25 287 87 21 0 0 0 chr2 1027171 1027192 -249660662 + AT_rich Low_complexity Low_complexity 1 21 0 2502 101 121 16 chr2 1028232 1028619 -249659235 + MSTA LTR MaLR 1 428 0 384 22 0 0 chr2 1028699 1028744 -249659110 + (TG)n Simple_repeat Simple_repeat 2 46 0 22 80 0 0 chr2 1030440 1030490 -249657364 + AT_rich Low_complexity Low_complexity 1 50 0 195 343 0 30 chr2 1030739 1030806 -249657048 - L2 LINE L2 -71 3201 3137 577 253 90 50 chr2 1030938 1031436 -249656418 + L1MEc LINE L1 784 1301 -5095 299 304 164 29 chr2 1031592 1031872 -249655982 - L2 LINE L2 -1682 1632 1315 4226 95 20 4 chr2 1031943 1032488 -249655366 - MER41A LTR ERV1 0 554 1 657 196 40 20 chr2 1033761 1033909 -249653945 - L1M4c LINE L1 -4860 1786 1636 * 3779 226 15 33 chr2 1033897 1034779 -249653075 - L1M4c LINE L1 -5662 880 15 322 236 0 14 chr2 1035092 1035164 -249652690 + MER94 DNA DNA 1 71 -63 227 265 0 0 chr2 1035179 1035228 -249652626 + GA-rich Low_complexity Low_complexity 2 50 0 2078 127 7 0 chr2 1035296 1035596 -249652258 - AluSx SINE Alu -10 302 1 21 0 0 0 chr2 1035804 1035825 -249652029 + AT_rich Low_complexity Low_complexity 1 21 0 1883 223 79 28 chr2 1035874 1036483 -249651371 + MER114 LTR ERV 1 640 -8 649 264 137 42 chr2 1037483 1037986 -249649868 - L1MEc LINE L1 -5812 584 34 4797 88 45 37 chr2 1039461 1040142 -249647712 - LTR12 LTR ERV1 -1 687 1 2857 80 14 8 chr2 1040369 1040731 -249647123 - THE1B LTR MaLR 0 364 1 527 297 36 10 chr2 1041220 1041412 -249646442 + MER63A DNA MER1_type 14 210 0 189 195 0 0 chr2 1042226 1042267 -249645587 + (CATATA)n Simple_repeat Simple_repeat 1 41 0 338 253 11 22 chr2 1042268 1042339 -249645515 + L1MC4 LINE L1 6613 6684 -1358 243 0 0 0 chr2 1042339 1042366 -249645488 + (TC)n Simple_repeat Simple_repeat 2 28 0 338 253 11 22 chr2 1042366 1042385 -249645469 + L1MC4 LINE L1 6684 6702 -1340 356 215 9 0 chr2 1042485 1042592 -249645262 + (TA)n Simple_repeat Simple_repeat 2 109 0 243 0 0 0 chr2 1042597 1042624 -249645230 + (TC)n Simple_repeat Simple_repeat 2 28 0 180 0 0 0 chr2 1042623 1042643 -249645211 + (TA)n Simple_repeat Simple_repeat 1 20 0 * 225 0 0 0 chr2 1042642 1042667 -249645187 + (CA)n Simple_repeat Simple_repeat 2 26 0 320 229 9 0 chr2 1042749 1042858 -249644996 + (TA)n Simple_repeat Simple_repeat 2 111 0 252 170 0 0 chr2 1042928 1042981 -249644873 + (TA)n Simple_repeat Simple_repeat 2 54 0 2492 166 29 45 chr2 1042983 1043451 -249644403 - MLT2B3 LTR ERVL -35 510 58 1762 166 11 65 chr2 1043453 1043809 -249644045 + MER1B DNA MER1_type 1 337 -2 542 31 0 0 chr2 1043810 1043874 -249643980 - MLT2B3 LTR ERVL -490 64 1 498 276 56 23 chr2 1044479 1044693 -249643161 - Zaphod DNA AcHobo 0 4031 3811 1919 175 55 134 chr2 1044696 1045514 -249642340 - Zaphod DNA AcHobo -2756 1275 523 234 268 71 0 chr2 1045617 1045729 -249642125 - Zaphod DNA AcHobo -3719 312 193 320 276 126 0 chr2 1047015 1047142 -249640712 + MIR3 SINE MIR 4 146 -62 2679 191 85 77 chr2 1047236 1047955 -249639899 + LTR8A LTR ERV1 1 725 -2 1799 266 19 8 chr2 1048089 1048571 -249639283 - MER41E LTR ERV1 -5 507 21 1916 171 24 0 chr2 1048966 1049306 -249638548 - MER57A LTR ERV1 -48 355 8 2024 108 4 14 chr2 1050033 1050310 -249637544 + AluSp SINE Alu 1 274 -39 3788 183 57 1 chr2 1051190 1051895 -249635959 + Tigger2 DNA MER2_type 1 744 -1974 1616 127 20 0 chr2 1051962 1052214 -249635640 + Tigger2 DNA MER2_type 2462 2718 0 3495 118 19 6 chr2 1052273 1052789 -249635065 - MER1A DNA MER1_type -6 523 1 245 285 244 16 chr2 1052817 1053010 -249634844 + MIR SINE MIR 21 257 -5 626 202 0 9 chr2 1053163 1053277 -249634577 + L2 LINE L2 3197 3309 -4 25 51 0 0 chr2 1055631 1055670 -249632184 + AT_rich Low_complexity Low_complexity 1 39 0 497 234 109 85 chr2 1055987 1056254 -249631600 - L1ME1 LINE L1 -18 6148 5875 1340 250 76 7 chr2 1056377 1056813 -249631041 - MLT1C LTR MaLR -1 466 1 192 211 0 0 chr2 1057248 1057286 -249630568 + L3 LINE CR1 1514 1551 -26 270 300 118 18 chr2 1058071 1058181 -249629673 - L2 LINE L2 0 3313 3193 1437 37 0 0 chr2 1058191 1058352 -249629502 - L1PA3 LINE L1 -3 6152 5992 825 41 0 0 chr2 1058352 1058450 -249629404 + L1PA3 LINE L1 5899 5996 -159 1904 155 0 19 chr2 1058599 1058908 -249628946 - AluJo SINE Alu -9 303 1 383 178 82 0 chr2 1059194 1059267 -249628587 + MER3 DNA MER1_type 115 193 -16 212 193 36 133 chr2 1059444 1059527 -249628327 + L2 LINE L2 3117 3191 -81 247 326 74 0 chr2 1059588 1059683 -249628171 - L2 LINE L2 -22 3250 3149 620 318 108 43 chr2 1059807 1060464 -249627390 - L2 LINE L2 -338 2976 2277 259 182 0 18 chr2 1060500 1060555 -249627299 + Ricksha DNA DNA 815 868 -1178 2207 163 52 12 chr2 1060558 1060795 -249627059 - MLT1C LTR MaLR -27 440 179 2412 94 0 0 chr2 1060795 1061104 -249626750 - AluSg SINE Alu -1 309 1 2207 163 52 12 chr2 1061104 1061271 -249626583 - MLT1C LTR MaLR -288 179 20 694 234 119 22 chr2 1061288 1061514 -249626340 + MLT1A1 LTR MaLR 11 258 -107 865 173 12 19 chr2 1061525 1061687 -249626167 + MLT1A1 LTR MaLR 205 365 0 268 276 120 26 chr2 1061707 1061899 -249625955 - L2 LINE L2 -1087 2227 2018 1699 215 27 87 chr2 1063078 1063190 -249624664 - MLT2B3 LTR ERVL -2 552 435 3568 81 25 2 chr2 1063190 1063633 -249624221 + MLT2A2 LTR ERVL 1 453 0 1699 215 27 87 chr2 1063633 1064106 -249623748 - MLT2B3 LTR ERVL -119 435 2 1266 152 156 56 chr2 1064433 1064607 -249623247 + AluJo SINE Alu 1 213 -99 2212 152 48 28 chr2 1064607 1064962 -249622892 - THE1B LTR MaLR 0 364 3 1266 152 156 56 chr2 1064962 1065057 -249622797 + AluJo SINE Alu 213 297 -15 241 143 36 18 chr2 1065834 1065890 -249621964 - L1MC4 LINE L1 -1343 6699 6643 268 329 48 14 chr2 1066656 1066802 -249621052 + L2 LINE L2 2885 3035 -237 21 0 0 0 chr2 1066909 1066930 -249620924 + AT_rich Low_complexity Low_complexity 1 21 0 9607 116 17 6 chr2 1067866 1070245 -249617609 - L1PA11 LINE L1 -2 6172 3780 2384 106 0 73 chr2 1070245 1070643 -249617211 - L1PB1 LINE L1 0 6151 5783 7040 123 13 3 chr2 1070643 1071920 -249615934 - L1MA2 LINE L1 -26 6278 4992 6549 126 2 25 chr2 1071918 1073325 -249614529 - L1PB1 LINE L1 -3 7586 6212 * 1503 249 37 0 chr2 1073321 1073758 -249614096 - L1 LINE L1 -2794 4790 4338 * 10232 125 54 9 chr2 1073892 1076190 -249611664 - L1PBa LINE L1 -3714 3148 599 1309 131 10 0 chr2 1076164 1076362 -249611492 - L1PBa LINE L1 -6663 200 1 * 14662 205 23 28 chr2 1076373 1080531 -249607323 - L1PB1 LINE L1 -2361 5223 2 514 258 50 33 chr2 1081922 1082104 -249605750 - L1MC4 LINE L1 -1373 6669 6485 275 70 0 0 chr2 1083465 1083508 -249604346 + Alu SINE Alu 260 302 0 254 69 52 69 chr2 1083641 1083699 -249604155 + MLT1B LTR MaLR 1 57 -333 186 304 120 0 chr2 1084131 1084223 -249603631 - MIR SINE MIR -71 191 89 228 292 0 0 chr2 1085841 1085906 -249601948 + (CAATT)n Simple_repeat Simple_repeat 3 67 0 185 250 0 18 chr2 1087136 1087192 -249600662 + L2 LINE L2 3194 3248 -24 283 175 18 0 chr2 1087192 1087249 -249600605 - MLT1I LTR MaLR 0 409 352 769 276 44 4 chr2 1087296 1087521 -249600333 - MLT1I LTR MaLR -175 234 1 2086 74 0 0 chr2 1087894 1088164 -249599690 + AluY SINE Alu 39 308 -3 463 279 109 80 chr2 1089357 1089724 -249598130 + MLT1H1 LTR MaLR 100 484 -71 2181 108 0 7 chr2 1089724 1090030 -249597824 + AluSx SINE Alu 1 304 -8 463 279 109 80 chr2 1090030 1090102 -249597752 + MLT1H1 LTR MaLR 484 552 -3 867 87 17 29 chr2 1090873 1091046 -249596808 + (TTCCC)n Simple_repeat Simple_repeat 3 173 0 484 328 22 11 chr2 1091884 1092067 -249595787 - MIR SINE MIR -8 254 70 2489 110 17 80 chr2 1092095 1092212 -249595642 - L1MA4A LINE L1 -11 6292 6169 2380 64 0 10 chr2 1092212 1092525 -249595329 - AluY SINE Alu -1 310 1 2489 110 17 80 chr2 1092525 1092872 -249594982 - L1MA4A LINE L1 -134 6169 5857 608 162 0 51 chr2 1093079 1093122 -249594732 + L1MA3 LINE L1 6195 6239 -66 2439 120 28 11 chr2 1093122 1093480 -249594374 + THE1B LTR MaLR 1 364 0 608 162 0 51 chr2 1093480 1093553 -249594301 + L1MA3 LINE L1 6239 6305 0 265 320 22 10 chr2 1094666 1094800 -249593054 + MIR SINE MIR 85 218 -44 241 232 85 73 chr2 1094903 1094985 -249592869 + MIR SINE MIR 87 169 -93 1841 108 7 32 chr2 1095506 1095784 -249592070 + AluSx SINE Alu 3 273 -39 2319 81 0 0 chr2 1097202 1097511 -249590343 + AluY SINE Alu 1 309 -2 2054 100 19 19 chr2 1097800 1098111 -249589743 + AluSq SINE Alu 3 313 0 803 185 43 19 chr2 1098913 1099124 -249588730 + Charlie5 DNA MER1_type 2366 2581 -31 335 279 14 0 chr2 1099192 1099339 -249588515 + CT-rich Low_complexity Low_complexity 4 152 0 2725 83 11 0 chr2 1099578 1099929 -249587925 - THE1A LTR MaLR 0 355 1 12102 93 2 1 chr2 1099929 1101506 -249586348 - THE1A-int LTR MaLR 0 1580 1 2486 104 17 20 chr2 1101506 1101862 -249585992 - THE1A LTR MaLR 0 355 1 346 307 122 55 chr2 1101930 1102168 -249585686 - L2 LINE L2 0 3272 3019 249 327 36 27 chr2 1103207 1103317 -249584537 + L2 LINE L2 3157 3267 -5 2327 103 0 0 chr2 1103382 1103694 -249584160 - AluSx SINE Alu 0 312 1 204 276 105 0 chr2 1107041 1107117 -249580737 + MIR SINE MIR 138 221 -41 248 292 123 39 chr2 1107571 1107701 -249580153 + MIR3 SINE MIR 34 174 -34 227 261 203 0 chr2 1108355 1108424 -249579430 - MIR SINE MIR -63 145 63 197 304 36 0 chr2 1108917 1108973 -249578881 + L2 LINE L2 3248 3305 -8 372 311 0 19 chr2 1108973 1109079 -249578775 + MIR SINE MIR 42 145 -63 25 51 0 0 chr2 1109170 1109209 -249578645 + AT_rich Low_complexity Low_complexity 1 39 0 432 214 119 8 chr2 1109731 1109857 -249577997 + MIR SINE MIR 113 252 -10 220 273 15 15 chr2 1110005 1110071 -249577783 + L2 LINE L2 3202 3267 -5 2202 98 0 0 chr2 1110216 1110522 -249577332 - AluSc SINE Alu -3 306 1 381 258 25 58 chr2 1110551 1110671 -249577183 + L2 LINE L2 3134 3249 -23 329 207 224 35 chr2 1110913 1111029 -249576825 - L2 LINE L2 -15 3298 3161 395 288 85 30 chr2 1112287 1112523 -249575331 + HERV16 LTR ERVL 1241 1489 -3507 379 230 11 0 chr2 1112969 1113056 -249574798 - MER53 DNA DNA -2 187 100 269 146 104 0 chr2 1114388 1114436 -249573418 + Charlie3 DNA MER1_type 2645 2697 -13 295 178 14 14 chr2 1114490 1114563 -249573291 + GA-rich Low_complexity Low_complexity 4 76 0 982 264 162 57 chr2 1114777 1115033 -249572821 - HAL1 LINE L1 -1352 1155 927 1915 141 7 0 chr2 1115033 1115332 -249572522 - AluSx SINE Alu -11 301 1 982 264 162 57 chr2 1115332 1115743 -249572111 - HAL1 LINE L1 -1580 927 418 285 232 0 0 chr2 1115806 1115875 -249571979 + CT-rich Low_complexity Low_complexity 5 73 0 3629 121 19 4 chr2 1115926 1116440 -249571414 - MER1A DNA MER1_type -5 524 3 277 303 37 28 chr2 1116684 1116793 -249571061 - L1MC4 LINE L1 -140 7902 7793 1513 203 128 30 chr2 1116808 1117246 -249570608 - MLT1D LTR MaLR -4 501 21 1782 152 18 0 chr2 1117384 1117661 -249570193 + AluJb SINE Alu 13 294 -18 412 214 128 0 chr2 1117671 1117788 -249570066 - L1MC4 LINE L1 -386 7656 7525 1954 135 44 0 chr2 1118298 1118595 -249569259 - AluSx SINE Alu -2 310 1 245 240 13 13 chr2 1118669 1118744 -249569110 + (TA)n Simple_repeat Simple_repeat 2 76 0 1913 144 0 21 chr2 1119370 1119661 -249568193 - AluJo SINE Alu -10 302 18 282 116 0 0 chr2 1119883 1119926 -249567928 + (GGGGA)n Simple_repeat Simple_repeat 4 46 0 2140 98 55 33 chr2 1119976 1120343 -249567511 + THE1C LTR MaLR 1 375 0 208 328 25 34 chr2 1121011 1121130 -249566724 - MIR SINE MIR -121 141 24 244 325 51 8 chr2 1121672 1121789 -249566065 - MIR SINE MIR -90 172 51 591 134 47 20 chr2 1122894 1123246 -249564608 + (TG)n Simple_repeat Simple_repeat 1 361 0 499 180 28 17 chr2 1123261 1123439 -249564415 + (TG)n Simple_repeat Simple_repeat 1 180 0 666 124 47 9 chr2 1123472 1123811 -249564043 + (TG)n Simple_repeat Simple_repeat 1 352 0 410 117 32 11 chr2 1124086 1124180 -249563674 + (TG)n Simple_repeat Simple_repeat 1 96 0 872 196 119 35 chr2 1124189 1124507 -249563347 + MSTC LTR MaLR 42 421 -7 1102 240 50 89 chr2 1124714 1125273 -249562581 - MER89 LTR ERV1 -22 537 1 180 0 0 0 chr2 1125889 1125909 -249561945 + (TC)n Simple_repeat Simple_repeat 2 21 0 3774 157 21 97 chr2 1126845 1127056 -249560798 - MER54B LTR ERVL 0 793 568 1625 184 0 27 chr2 1127056 1127350 -249560504 - AluJb SINE Alu -26 286 1 3774 157 21 97 chr2 1127350 1127996 -249559858 - MER54B LTR ERVL -225 568 1 304 346 59 0 chr2 1130645 1130781 -249557073 - MIR SINE MIR -18 244 101 1775 194 22 27 chr2 1130853 1131220 -249556634 + MLT1A1 LTR MaLR 1 365 0 204 125 0 0 chr2 1131439 1131471 -249556383 + (CTG)n Simple_repeat Simple_repeat 2 33 0 243 216 39 0 chr2 1131586 1131637 -249556217 + CT-rich Low_complexity Low_complexity 3 55 0 257 287 151 6 chr2 1132448 1132571 -249555283 - MIR SINE MIR -61 147 30 259 279 67 39 chr2 1132650 1132754 -249555100 + MIR SINE MIR 48 154 -108 227 266 16 0 chr2 1134270 1134334 -249553520 - L2 LINE L2 -5 3267 3203 306 281 58 8 chr2 1134373 1134494 -249553360 + L1MEd LINE L1 54 180 -5939 552 231 140 52 chr2 1134814 1135122 -249552732 + L1MC4 LINE L1 7708 8042 0 655 331 84 22 chr2 1135125 1135493 -249552361 + L1MEd LINE L1 404 794 -5325 303 305 121 11 chr2 1136237 1136509 -249551345 + L1M4 LINE L1 3626 3927 -2219 531 269 87 107 chr2 1136657 1137264 -249550590 - MLT1G1 LTR MaLR 0 595 1 185 333 0 15 chr2 1137663 1137729 -249550125 - MIR SINE MIR -150 112 48 738 462 14 41 chr2 1138619 1138693 -249549161 + MER44D DNA MER2_type 1 76 -2415 180 0 0 0 chr2 1138693 1138713 -249549141 + (GA)n Simple_repeat Simple_repeat 1 20 0 738 462 14 41 chr2 1138713 1138928 -249548926 + MER44D DNA MER2_type 76 552 -57 241 248 173 51 chr2 1139014 1139228 -249548626 - L1MEc LINE L1 -1163 5052 4813 617 297 110 64 chr2 1139553 1140904 -249546950 - L1MEc LINE L1 -1672 4543 3255 2504 98 0 35 chr2 1140904 1140944 -249546910 - THE1B LTR MaLR 0 364 324 2252 95 6 38 chr2 1140944 1141260 -249546594 + AluY SINE Alu 1 306 -5 2504 98 0 35 chr2 1141260 1141596 -249546258 - THE1B LTR MaLR -40 324 1 10460 108 33 34 chr2 1141596 1143178 -249544676 - THE1B-int LTR MaLR 0 1580 1 2611 123 0 3 chr2 1143178 1143543 -249544311 - THE1B LTR MaLR 0 364 1 617 297 110 64 chr2 1143543 1143978 -249543876 - L1MEc LINE L1 -2959 3256 2673 4084 237 79 18 chr2 1144108 1145521 -249542333 - L1MC/D LINE L1 -743 5821 4424 592 183 46 8 chr2 1145565 1145696 -249542158 - L1 LINE L1 -1862 4284 4149 * 5910 126 28 22 chr2 1145694 1146921 -249540933 - L1P4 LINE L1 -587 5581 4364 3534 274 24 24 chr2 1146943 1148106 -249539748 - L1MC/D LINE L1 -4878 1167 5 965 222 4 12 chr2 1148120 1148372 -249539482 - L1MEc LINE L1 -3951 2445 2196 1559 93 0 0 chr2 1148407 1148600 -249539254 + AluSg1 SINE Alu 9 201 -108 227 148 37 0 chr2 1148700 1148754 -249539100 + C-rich Low_complexity Low_complexity 2 57 0 228 111 0 0 chr2 1149144 1149180 -249538674 + (T)n Simple_repeat Simple_repeat 1 36 0 22298 154 25 41 chr2 1150212 1151137 -249536717 - L1PB1 LINE L1 -1 6465 5527 2872 93 0 3 chr2 1151137 1151513 -249536341 - THE1C LTR MaLR 0 375 1 22298 154 25 41 chr2 1151513 1152306 -249535548 - L1PB1 LINE L1 -939 5527 4723 1841 126 18 22 chr2 1152306 1152584 -249535270 - AluSx SINE Alu 0 312 36 22298 154 25 41 chr2 1152584 1152646 -249535208 - L1PB1 LINE L1 -1743 4723 4662 6544 71 0 2 chr2 1152646 1154310 -249533544 - L1PA8A LINE L1 -3 6128 4477 5737 38 0 18 chr2 1154315 1155020 -249532834 - L1PA4 LINE L1 0 6155 5464 22298 154 25 41 chr2 1155020 1156212 -249531642 - L1PB1 LINE L1 -1808 4658 3448 234 0 0 0 chr2 1156212 1156238 -249531616 + (TA)n Simple_repeat Simple_repeat 2 27 0 22298 154 25 41 chr2 1156238 1159755 -249528099 - L1PB1 LINE L1 -3018 3448 1 4541 206 16 2 chr2 1159765 1160699 -249527155 - L1 LINE L1 -1773 4373 3427 336 270 138 7 chr2 1161958 1162110 -249525744 - MIR SINE MIR -79 183 12 215 342 63 54 chr2 1164525 1164747 -249523107 - L2 LINE L2 -125 3147 2924 3580 75 25 2 chr2 1166027 1166507 -249521347 + L1PA8 LINE L1 5682 6172 0 483 247 121 6 chr2 1167177 1167359 -249520495 + MIR SINE MIR 59 261 -1 281 250 218 16 chr2 1168141 1168393 -249519461 - L1ME4a LINE L1 -4 6117 5815 23 0 0 0 chr2 1168424 1168447 -249519407 + AT_rich Low_complexity Low_complexity 1 23 0 409 269 154 29 chr2 1168703 1168878 -249518976 - Charlie8 DNA MER1_type -2195 222 26 237 363 50 16 chr2 1169286 1169468 -249518386 - MIR SINE MIR -73 189 2 316 275 128 0 chr2 1170597 1170706 -249517148 - L2 LINE L2 -3 3310 3188 2367 92 7 3 chr2 1171045 1171348 -249516506 - AluSx SINE Alu -8 304 1 230 206 118 0 chr2 1173125 1173193 -249514661 - MIR3 SINE MIR -21 187 112 21 36 0 0 chr2 1173731 1173759 -249514095 + AT_rich Low_complexity Low_complexity 1 28 0 195 136 0 58 chr2 1173969 1174072 -249513782 + (TA)n Simple_repeat Simple_repeat 1 97 0 186 133 0 0 chr2 1174724 1174754 -249513100 + (T)n Simple_repeat Simple_repeat 1 30 0 187 221 0 88 chr2 1175902 1175970 -249511884 + MIR SINE MIR 109 170 -92 315 62 0 42 chr2 1177132 1177180 -249510674 + Alu SINE Alu 250 295 -6 1349 280 48 26 chr2 1177180 1177862 -249509992 - L1MEc LINE L1 -4222 2174 1478 1913 142 79 17 chr2 1178883 1179236 -249508618 + THE1C LTR MaLR 1 375 0 386 267 62 67 chr2 1180137 1180347 -249507507 - MLT1K LTR MaLR 0 588 380 256 250 0 112 chr2 1180373 1180489 -249507365 - L2 LINE L2 -18 3295 3193 1782 196 88 60 chr2 1180875 1181374 -249506480 - MLT2B1 LTR ERVL -3 517 5 330 317 81 16 chr2 1181375 1181561 -249506293 - MIR SINE MIR -25 237 40 201 250 26 13 chr2 1182822 1182898 -249504956 + CT-rich Low_complexity Low_complexity 3 79 0 215 237 278 18 chr2 1184013 1184182 -249503672 - MIR SINE MIR -20 242 30 299 310 8 0 chr2 1184825 1184954 -249502900 + (TG)n Simple_repeat Simple_repeat 2 131 0 423 322 0 0 chr2 1184973 1185153 -249502701 + (TG)n Simple_repeat Simple_repeat 1 180 0 2282 266 70 14 chr2 1185734 1186685 -249501169 - Charlie2 DNA MER1_type 0 2862 1858 464 284 64 36 chr2 1186705 1186955 -249500899 - Charlie2 DNA MER1_type -2560 302 46 497 287 18 24 chr2 1186962 1187129 -249500725 - MER5B DNA MER1_type -12 166 1 204 276 83 70 chr2 1188000 1188156 -249499698 + L2 LINE L2 3155 3312 -1 3064 196 16 13 chr2 1188574 1189208 -249498646 - L1MA4 LINE L1 -6 6294 5659 2019 144 42 31 chr2 1190334 1190694 -249497160 + THE1B LTR MaLR 1 364 0 392 215 0 0 chr2 1190867 1190960 -249496894 - L1MB8 LINE L1 -2 6176 6084 2130 222 45 8 chr2 1190972 1191463 -249496391 - L1MB4 LINE L1 -13 6167 5659 248 222 34 26 chr2 1191997 1192114 -249495740 + (TA)n Simple_repeat Simple_repeat 2 119 0 243 175 48 16 chr2 1192830 1192893 -249494961 + MIR SINE MIR 104 168 -94 306 290 128 39 chr2 1193634 1193975 -249493879 - L2 LINE L2 -183 3130 2705 183 311 123 0 chr2 1194004 1194110 -249493744 - L2 LINE L2 -703 2611 2493 809 263 10 0 chr2 1194160 1194354 -249493500 - MLT1A1 LTR MaLR 0 365 170 788 167 29 64 chr2 1194458 1194662 -249493192 - MLT1A1 LTR MaLR -176 198 2 1617 199 178 20 chr2 1196011 1196056 -249491798 - MLT2B2 LTR ERVL 0 515 478 240 35 0 0 chr2 1196056 1196085 -249491769 + (CA)n Simple_repeat Simple_repeat 2 30 0 1617 199 178 20 chr2 1196085 1196482 -249491372 - MLT2B2 LTR ERVL -37 478 3 2365 127 25 0 chr2 1196627 1196982 -249490872 - THE1B LTR MaLR 0 364 1 3893 75 26 0 chr2 1196982 1197478 -249490376 - THE1B-int LTR MaLR 0 1580 1072 4401 164 33 33 chr2 1197479 1198466 -249489388 - MER11C LTR ERVK 0 1071 1 6923 116 19 40 chr2 1198466 1199550 -249488304 - THE1B-int LTR MaLR -519 1061 1 2319 130 28 3 chr2 1199550 1199904 -249487950 - THE1B LTR MaLR 0 364 2 275 317 49 21 chr2 1199946 1200088 -249487766 - MIR3 SINE MIR -60 148 3 2095 118 180 114 chr2 1200382 1200950 -249486904 + LTR18B LTR ERVL 1 605 -9 267 317 50 17 chr2 1201039 1201159 -249486695 + MIR SINE MIR 22 145 -117 1642 183 49 24 chr2 1201616 1201944 -249485910 - MLT1A1 LTR MaLR -4 361 26 216 0 0 0 chr2 1203270 1203294 -249484560 + (T)n Simple_repeat Simple_repeat 1 24 0 219 336 37 15 chr2 1204052 1204186 -249483668 + MIR SINE MIR 16 152 -56 2529 116 3 0 chr2 1205592 1205946 -249481908 + THE1A LTR MaLR 1 355 0 1358 147 0 9 chr2 1207253 1207464 -249480390 - AluJb SINE Alu -20 292 84 326 253 110 24 chr2 1207662 1207806 -249480048 - MER5B DNA MER1_type -24 165 2 200 339 77 15 chr2 1208336 1208466 -249479388 - MIR3 SINE MIR -6 202 65 2228 148 36 17 chr2 1208620 1208977 -249478877 + THE1B LTR MaLR 1 364 0 182 193 35 70 chr2 1209451 1209508 -249478346 - MIR3 SINE MIR -54 154 100 1111 124 34 51 chr2 1209606 1209785 -249478069 - L1MA8 LINE L1 -10 6281 6104 2188 113 3 0 chr2 1209785 1210088 -249477766 + AluSx SINE Alu 1 304 0 1111 124 34 51 chr2 1210088 1210141 -249477713 - L1MA8 LINE L1 -187 6104 6052 307 286 0 0 chr2 1210183 1210260 -249477594 + MIR SINE MIR 173 249 -13 472 306 40 5 chr2 1210349 1210548 -249477306 - MIR SINE MIR -7 255 50 237 204 0 0 chr2 1211191 1211240 -249476614 - L3 LINE CR1 -180 1397 1349 21 0 0 0 chr2 1211582 1211603 -249476251 + AT_rich Low_complexity Low_complexity 1 21 0 255 232 29 14 chr2 1211703 1211772 -249476082 - MLT1I LTR MaLR -30 379 310 264 356 29 19 chr2 1211990 1212198 -249475656 - L1M4 LINE L1 -1333 4813 4604 4637 205 19 12 chr2 1212234 1213432 -249474422 - L1PA16 LINE L1 -722 5444 4232 4068 137 63 1 chr2 1213432 1214097 -249473757 + L1PA16 LINE L1 5452 6157 -9 39 0 0 0 chr2 1214507 1214546 -249473308 + AT_rich Low_complexity Low_complexity 1 39 0 273 183 0 0 chr2 1214802 1214862 -249472992 + (TA)n Simple_repeat Simple_repeat 2 61 0 467 322 91 10 chr2 1215093 1215487 -249472367 - HAL1 LINE L1 -855 1652 1227 468 286 36 96 chr2 1215509 1215925 -249471929 - L1MEd LINE L1 -5034 1085 695 217 358 37 19 chr2 1216629 1216791 -249471063 - L3 LINE CR1 -606 971 807 3598 137 18 0 chr2 1216957 1217469 -249470385 + MER1A DNA MER1_type 1 521 -8 276 331 108 7 chr2 1217623 1217771 -249470083 + MIR SINE MIR 49 211 -51 744 212 38 11 chr2 1218410 1218594 -249469260 + MER5A DNA MER1_type 1 189 0 215 205 0 0 chr2 1219412 1219451 -249468403 + GA-rich Low_complexity Low_complexity 1 39 0 211 317 98 55 chr2 1220879 1221043 -249466811 - MIR3 SINE MIR -32 176 6 242 222 14 28 chr2 1221741 1221813 -249466041 + CT-rich Low_complexity Low_complexity 2 72 0 203 200 0 40 chr2 1222432 1222482 -249465372 + C-rich Low_complexity Low_complexity 5 52 0 1123 293 43 5 chr2 1223044 1223484 -249464370 + MLT1C LTR MaLR 1 457 -10 2848 85 0 0 chr2 1223645 1224009 -249463845 + THE1B LTR MaLR 1 364 0 192 302 128 20 chr2 1224645 1224794 -249463060 + MIR3 SINE MIR 33 197 -11 236 221 143 0 chr2 1225262 1225339 -249462515 - MER5A DNA MER1_type -80 109 22 219 233 0 0 chr2 1227062 1227105 -249460749 + (CAT)n Simple_repeat Simple_repeat 3 45 0 227 255 0 0 chr2 1229314 1229365 -249458489 + PABL_B LTR ERV1 1 51 -616 272 336 96 64 chr2 1229403 1229715 -249458139 + PABL_A LTR ERV1 25 346 -314 820 229 36 32 chr2 1229886 1230139 -249457715 + PABL_B LTR ERV1 414 667 0 230 254 17 0 chr2 1230836 1230895 -249456959 + L3 LINE CR1 1515 1574 -3 771 170 7 22 chr2 1231612 1231747 -249456107 + FLAM_C SINE Alu 1 133 0 377 306 23 12 chr2 1231827 1232000 -249455854 - HAL1 LINE L1 -89 2418 2244 811 287 120 40 chr2 1232237 1233043 -249454811 - HAL1 LINE L1 -604 1903 1033 1319 119 39 153 chr2 1233047 1233407 -249454447 - L1MA4A LINE L1 0 6303 5985 900 216 42 0 chr2 1233670 1233860 -249453994 - MER58A DNA MER1_type -3 221 24 241 305 51 0 chr2 1233980 1234098 -249453756 - HAL1 LINE L1 -1777 730 607 277 344 2 11 chr2 1234207 1234318 -249453536 + MER5A DNA MER1_type 67 172 -6 226 277 161 15 chr2 1234879 1235016 -249452838 + MER110 LTR ERV1 307 463 -28 240 200 0 0 chr2 1236568 1236618 -249451236 + (TG)n Simple_repeat Simple_repeat 1 50 0 3268 84 34 2 chr2 1236876 1237314 -249450540 + MLT2A2 LTR ERVL 2 453 0 43778 78 13 4 chr2 1237314 1242918 -249444936 + HERVL-A2 LTR ERVL 1 5654 0 3094 97 26 29 chr2 1242918 1243329 -249444525 + MLT2A2 LTR ERVL 1 411 -42 198 0 0 0 chr2 1243329 1243351 -249444503 + (TA)n Simple_repeat Simple_repeat 2 23 0 375 23 0 0 chr2 1243357 1243401 -249444453 + (TC)n Simple_repeat Simple_repeat 1 44 0 3094 97 26 29 chr2 1243401 1243436 -249444418 + MLT2A2 LTR ERVL 416 453 0 1271 160 106 57 chr2 1243834 1244116 -249443738 - AluJo SINE Alu -16 296 1 489 279 132 11 chr2 1244623 1244813 -249443041 + MIR SINE MIR 50 262 0 1500 204 56 66 chr2 1245604 1245997 -249441857 + MLT1B LTR MaLR 1 389 -1 328 248 95 19 chr2 1246019 1246124 -249441730 - L1ME3A LINE L1 -223 5947 5835 1578 90 0 0 chr2 1248027 1248238 -249439616 - L1PA8 LINE L1 0 6172 5962 1841 122 38 94 chr2 1248972 1249027 -249438827 + THE1C LTR MaLR 1 58 -317 2373 94 7 0 chr2 1249027 1249335 -249438519 + AluSx SINE Alu 1 310 -2 1841 122 38 94 chr2 1249335 1249674 -249438180 + THE1C LTR MaLR 58 373 -2 299 132 0 19 chr2 1250195 1250248 -249437606 + THE1C LTR MaLR 124 175 -200 202 178 56 33 chr2 1250984 1251074 -249436780 + (TA)n Simple_repeat Simple_repeat 1 92 0 26 30 0 0 chr2 1251158 1251191 -249436663 + AT_rich Low_complexity Low_complexity 1 33 0 1124 110 12 18 chr2 1252198 1252361 -249435493 - AluJ SINE Alu -11 301 140 333 132 19 0 chr2 1252645 1252698 -249435156 + MSTA LTR MaLR 1 54 -374 239 185 0 37 chr2 1252714 1252768 -249435086 - AluJ SINE Alu -169 133 82 298 270 13 19 chr2 1252966 1253125 -249434729 + (TA)n Simple_repeat Simple_repeat 2 159 0 189 74 0 0 chr2 1253125 1253152 -249434702 + (GA)n Simple_repeat Simple_repeat 2 28 0 1771 126 0 39 chr2 1254122 1254332 -249433522 + Charlie3 DNA MER1_type 1 218 -2494 2735 93 11 13 chr2 1254332 1254708 -249433146 - THE1C LTR MaLR 0 375 1 1771 126 0 39 chr2 1254708 1254892 -249432962 + Charlie3 DNA MER1_type 218 2712 0 1399 204 37 74 chr2 1255309 1255712 -249432142 - MLT1B LTR MaLR -2 388 1 439 248 7 7 chr2 1255859 1256008 -249431846 + CT-rich Low_complexity Low_complexity 4 152 0 309 294 164 36 chr2 1256221 1256659 -249431195 + L1ME4a LINE L1 5448 5941 -180 200 83 0 28 chr2 1259047 1259083 -249428771 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 19646 55 1 1 chr2 1259083 1262289 -249425565 - L1PA5 LINE L1 -24 6130 2926 207 236 83 14 chr2 1263764 1263836 -249424018 + MIR SINE MIR 48 124 -138 288 250 14 19 chr2 1263844 1263998 -249423856 - MLT1J1 LTR MaLR -11 500 237 354 321 37 21 chr2 1264154 1264341 -249423513 - MLT1J2 LTR MaLR -254 196 7 208 356 22 0 chr2 1264350 1264440 -249423414 + MIR SINE MIR 166 257 -5 21 0 0 0 chr2 1264663 1264684 -249423170 + AT_rich Low_complexity Low_complexity 1 21 0 185 238 0 0 chr2 1264839 1264881 -249422973 + MIR SINE MIR 203 244 -18 1564 229 31 3 chr2 1266159 1266512 -249421342 - MLT1A1 LTR MaLR 0 365 3 2278 70 47 3 chr2 1266665 1266963 -249420891 + AluSq SINE Alu 1 311 -2 192 40 0 0 chr2 1267215 1267240 -249420614 + (CA)n Simple_repeat Simple_repeat 1 25 0 521 266 49 21 chr2 1267289 1267432 -249420422 - MIR SINE MIR -112 150 4 280 312 14 7 chr2 1267810 1267951 -249419903 + (TCTA)n Simple_repeat Simple_repeat 3 144 0 258 273 65 79 chr2 1269768 1269907 -249417947 + MIR SINE MIR 8 144 -118 5809 143 5 4 chr2 1271475 1272395 -249415459 - L1MA5 LINE L1 0 6300 5380 339 65 0 0 chr2 1273001 1273047 -249414807 + (TG)n Simple_repeat Simple_repeat 2 47 0 269 362 7 33 chr2 1274949 1275101 -249412753 - MIR SINE MIR -113 149 2 292 335 58 29 chr2 1275197 1275370 -249412484 + MIR SINE MIR 4 181 -81 809 119 0 84 chr2 1278026 1278169 -249409685 - L1PB4 LINE L1 -1 6155 6025 1295 193 89 50 chr2 1279067 1279404 -249408450 + MLT1B LTR MaLR 4 353 -37 374 271 25 8 chr2 1279681 1279799 -249408055 - L1ME3 LINE L1 -135 6027 5908 1925 251 75 56 chr2 1279805 1279993 -249407861 - L1MEc LINE L1 -3609 2606 2423 2205 114 7 0 chr2 1279993 1280291 -249407563 - AluSx SINE Alu -12 300 1 1925 251 75 56 chr2 1280291 1281459 -249406395 - L1MEc LINE L1 -3792 2423 1265 31 0 0 0 chr2 1282652 1282683 -249405171 + AT_rich Low_complexity Low_complexity 1 31 0 603 196 227 54 chr2 1284138 1284501 -249403353 - MLT1C LTR MaLR 0 390 1 289 310 90 19 chr2 1286441 1286709 -249401145 - LTR16C LTR ERVL -18 473 187 246 128 0 0 chr2 1286997 1287036 -249400818 + (TG)n Simple_repeat Simple_repeat 2 40 0 384 305 148 24 chr2 1287106 1287316 -249400538 - MIR SINE MIR -7 255 20 230 288 0 15 chr2 1287956 1288022 -249399832 - MIR SINE MIR -176 86 22 333 235 6 41 chr2 1288365 1288535 -249399319 + GA-rich Low_complexity Low_complexity 4 167 0 505 303 109 45 chr2 1288539 1289007 -249398847 - L2 LINE L2 -1686 1628 1131 208 326 57 7 chr2 1289028 1289169 -249398685 - L2 LINE L2 -2879 435 288 243 114 0 89 chr2 1289215 1289294 -249398560 + (TAATG)n Simple_repeat Simple_repeat 4 75 0 1352 271 130 23 chr2 1289337 1289989 -249397865 - L2 LINE L2 -2381 933 212 437 194 121 40 chr2 1289997 1290121 -249397733 - MER45A DNA AcHobo -35 143 10 199 268 177 30 chr2 1290150 1290314 -249397540 - L2 LINE L2 -3091 223 36 536 144 25 8 chr2 1291237 1291355 -249396499 + CT-rich Low_complexity Low_complexity 3 122 0 225 284 211 16 chr2 1291359 1291553 -249396301 + L2 LINE L2 1607 1838 -1476 1399 262 203 41 chr2 1291653 1292203 -249395651 + L2 LINE L2 2054 2513 -800 1707 166 3 18 chr2 1292203 1292518 -249395336 - AluSx SINE Alu 0 313 3 1399 262 203 41 chr2 1292518 1292999 -249394855 + L2 LINE L2 2513 3287 -26 1992 72 103 0 chr2 1295089 1295382 -249392472 + AluSp SINE Alu 1 320 0 15668 113 82 4 chr2 1295488 1295500 -249392354 - L1P LINE L1 -2149 3997 3987 9439 93 9 2 chr2 1295500 1297542 -249390312 - L1PA7 LINE L1 -3 6466 4427 15668 113 82 4 chr2 1297542 1298885 -249388969 - L1P LINE L1 -2159 3987 2751 396 0 0 0 chr2 1298885 1298929 -249388925 + (TA)n Simple_repeat Simple_repeat 2 45 0 15668 113 82 4 chr2 1298929 1300082 -249387772 - L1P LINE L1 -3395 2751 1291 414 103 0 0 chr2 1300079 1300137 -249387717 - L1PA7 LINE L1 -6393 68 11 * 3516 197 22 3 chr2 1300127 1300838 -249387016 - L1MB1 LINE L1 -190 5978 5254 1208 214 23 7 chr2 1300843 1301142 -249386712 - L1MB1 LINE L1 -3045 3101 2798 1157 264 32 19 chr2 1301142 1301456 -249386398 + MLT1E LTR MaLR 276 593 0 239 265 15 15 chr2 1302501 1302569 -249385285 + MIR SINE MIR 82 149 -113 192 158 0 0 chr2 1303792 1303830 -249384024 + CT-rich Low_complexity Low_complexity 2 39 0 860 275 36 20 chr2 1303890 1304141 -249383713 + MIR SINE MIR 5 259 -3 348 24 0 0 chr2 1304844 1304885 -249382969 + (TG)n Simple_repeat Simple_repeat 2 42 0 1440 282 123 17 chr2 1305593 1306128 -249381726 - MLT1E LTR MaLR 0 593 2 234 241 41 123 chr2 1306391 1306561 -249381293 + L2 LINE L2 2926 3081 -191 359 247 0 7 chr2 1306606 1306760 -249381094 + (CTA)n Simple_repeat Simple_repeat 1 153 0 288 289 117 0 chr2 1306841 1306969 -249380885 - MIR SINE MIR -8 254 112 2054 118 52 17 chr2 1307053 1307400 -249380454 + L1MA5A LINE L1 5936 6294 -3 234 244 219 24 chr2 1307611 1307734 -249380120 + MIR SINE MIR 115 261 -1 256 263 98 44 chr2 1309486 1309802 -249378052 - L1ME LINE L1 -4085 2176 1844 281 183 92 0 chr2 1309808 1309928 -249377926 - L1M4 LINE L1 -1712 4434 4304 342 250 100 17 chr2 1310727 1310847 -249377007 - L1M4 LINE L1 -1898 4248 4119 * 1440 254 94 58 chr2 1310845 1312269 -249375585 - L1ME LINE L1 -4448 1813 323 2247 222 14 30 chr2 1312694 1313203 -249374651 + MLT1D LTR MaLR 5 505 0 24 0 0 0 chr2 1313657 1313681 -249374173 + AT_rich Low_complexity Low_complexity 1 24 0 241 257 175 33 chr2 1313827 1314010 -249373844 + MLT1J2 LTR MaLR 228 436 -10 752 197 48 69 chr2 1314424 1314612 -249373242 + MER20 DNA MER1_type 36 219 0 187 286 208 31 chr2 1318159 1318351 -249369503 + L2 LINE L2 3086 3311 -2 * 211 277 0 0 chr2 1318349 1318396 -249369458 - L2 LINE L2 -26 3246 3200 191 143 20 51 chr2 1318463 1318561 -249369293 + (TA)n Simple_repeat Simple_repeat 1 95 0 286 292 20 119 chr2 1318601 1318803 -249369051 + MIR SINE MIR 2 183 -79 1444 216 58 50 chr2 1319074 1319436 -249368418 + MLT1A1 LTR MaLR 1 365 0 2022 146 0 0 chr2 1319493 1319780 -249368074 + AluSx SINE Alu 1 287 -25 643 241 65 12 chr2 1319795 1319965 -249367889 + MER5A DNA MER1_type 11 189 0 391 287 130 28 chr2 1321559 1321775 -249366079 + MIR SINE MIR 20 257 -5 304 327 0 19 chr2 1321797 1321901 -249365953 + MIR SINE MIR 117 218 -44 391 191 154 29 chr2 1322151 1322287 -249365567 + L1ME4a LINE L1 5961 6113 -8 270 151 57 0 chr2 1322536 1322589 -249365265 + L2 LINE L2 3217 3272 0 305 276 48 129 chr2 1322959 1323463 -249364391 + L2 LINE L2 2810 3272 0 199 242 0 121 chr2 1323572 1323663 -249364191 - MIR SINE MIR -95 167 88 197 339 0 0 chr2 1324475 1324531 -249363323 - MIR SINE MIR -68 140 85 3202 31 3 5 chr2 1324644 1325034 -249362820 - L1PA4 LINE L1 -1 6154 5766 359 150 25 12 chr2 1325035 1325115 -249362739 - L1MB8 LINE L1 -1 6177 6097 4455 250 105 52 chr2 1325118 1326975 -249360879 - L1ME1 LINE L1 -150 6827 5071 309 64 21 0 chr2 1326975 1327022 -249360832 - MADE1 DNA Mariner -2 78 31 4455 250 105 52 chr2 1327022 1327053 -249360801 - L1ME1 LINE L1 -1906 5071 5043 304 18 196 0 chr2 1327053 1327109 -249360745 - MADE1 DNA Mariner -13 67 1 4455 250 105 52 chr2 1327109 1327940 -249359914 - L1ME1 LINE L1 -1934 5043 4258 2836 13 0 0 chr2 1327940 1328251 -249359603 - AluYa5 SINE Alu 0 311 1 4455 250 105 52 chr2 1328251 1328352 -249359502 - L1ME1 LINE L1 -2719 4258 4164 2784 19 0 0 chr2 1328352 1328664 -249359190 - AluYb8 SINE Alu -6 312 1 4455 250 105 52 chr2 1328664 1330101 -249357753 - L1ME1 LINE L1 -2813 4164 2069 944 252 53 55 chr2 1330115 1330871 -249356983 - L1ME1 LINE L1 -4900 1955 1215 274 316 128 15 chr2 1331118 1331314 -249356540 - L1ME1 LINE L1 -6613 246 29 681 13 0 0 chr2 1332458 1332536 -249355318 + (TTCC)n Simple_repeat Simple_repeat 3 80 0 358 266 32 96 chr2 1333239 1333427 -249354427 - MIR SINE MIR -52 210 35 276 379 73 10 chr2 1333933 1334139 -249353715 + L2 LINE L2 2375 2593 -721 41 21 0 0 chr2 1334418 1334466 -249353388 + AT_rich Low_complexity Low_complexity 1 48 0 192 259 107 71 chr2 1334842 1334954 -249352900 - L3 LINE CR1 -1117 460 345 297 284 39 39 chr2 1335183 1335338 -249352516 - LTR33 LTR ERVL -22 499 345 583 300 82 8 chr2 1335338 1335581 -249352273 + L2 LINE L2 224 484 -2830 673 298 108 20 chr2 1335659 1336059 -249351795 + L3 LINE CR1 1111 1545 -32 340 191 24 0 chr2 1336158 1336242 -249351612 + (TCTA)n Simple_repeat Simple_repeat 1 86 0 716 321 111 14 chr2 1336618 1336976 -249350878 + L2 LINE L2 2606 2995 -318 198 243 229 0 chr2 1337842 1337912 -249349942 + MIR SINE MIR 171 256 -6 41026 34 21 2 chr2 1338226 1344277 -249343577 + L1PA3 LINE L1 1 6171 0 215 244 0 0 chr2 1344874 1344915 -249342939 + MER5B DNA MER1_type 6 46 -132 219 125 0 0 chr2 1345119 1345159 -249342695 + (TG)n Simple_repeat Simple_repeat 2 41 0 215 198 129 52 chr2 1345290 1345356 -249342498 + MIR SINE MIR 121 180 -82 1713 178 22 73 chr2 1345356 1345767 -249342087 + MLT1B LTR MaLR 1 390 0 215 198 129 52 chr2 1345767 1345816 -249342038 + MIR SINE MIR 180 245 -17 34 72 0 0 chr2 1345869 1345938 -249341916 + AT_rich Low_complexity Low_complexity 1 69 0 4372 171 47 39 chr2 1346054 1347230 -249340624 - L1MC1 LINE L1 -23 6310 5125 262 270 20 30 chr2 1347254 1347354 -249340500 - MIR SINE MIR -25 237 139 3981 236 28 21 chr2 1347372 1348656 -249339198 - L1MC1 LINE L1 -1058 5088 3796 1828 162 41 22 chr2 1348661 1349128 -249338726 + MLT2A2 LTR ERVL 1 370 -83 894 111 62 0 chr2 1349128 1349272 -249338582 - LTR9-int LTR ERV1 -47 8872 8720 540 194 8 15 chr2 1349426 1349560 -249338294 - LTR9-int LTR ERV1 -2450 2565 2433 * 800 160 11 11 chr2 1349551 1349726 -249338128 - LTR9-int LTR ERV1 -3693 4123 3949 26621 171 41 46 chr2 1349730 1356691 -249331163 - LTR9-int LTR ERV1 -471 6947 22 3428 133 68 22 chr2 1356712 1357297 -249330557 - LTR9 LTR ERV1 0 612 1 1594 94 0 31 chr2 1357297 1357551 -249330303 + HERVL-A2 LTR ERVL 5409 5654 0 1954 170 56 33 chr2 1357551 1358078 -249329776 + MLT2A2 LTR ERVL 1 554 0 1103 279 42 5 chr2 1358078 1358505 -249329349 - L1MC1 LINE L1 -2351 3795 3353 23 33 0 0 chr2 1358839 1358869 -249328985 + AT_rich Low_complexity Low_complexity 1 30 0 185 116 0 47 chr2 1359083 1359126 -249328728 + (CATATA)n Simple_repeat Simple_repeat 2 42 0 842 141 88 0 chr2 1359335 1359505 -249328349 + L1MB3 LINE L1 5998 6182 -1 2118 137 45 31 chr2 1359525 1359703 -249328151 + THE1B LTR MaLR 1 175 -189 2252 78 41 0 chr2 1359703 1359998 -249327856 + AluY SINE Alu 1 307 -4 2118 137 45 31 chr2 1359998 1360178 -249327676 + THE1B LTR MaLR 175 364 0 2302 99 0 40 chr2 1362543 1362866 -249324988 + AluSq SINE Alu 1 310 -3 555 262 47 58 chr2 1364917 1365089 -249322765 + MIR SINE MIR 27 196 -66 349 203 80 129 chr2 1365092 1365255 -249322599 - L2 LINE L2 0 3313 3159 321 109 0 0 chr2 1365259 1365314 -249322540 + (T)n Simple_repeat Simple_repeat 1 55 0 2240 78 0 0 chr2 1366092 1366421 -249321433 - AluY SINE Alu 0 329 1 277 136 30 76 chr2 1367206 1367272 -249320582 - HERV17 LTR ERV1 -6241 2385 2323 839 209 32 13 chr2 1369276 1369555 -249318299 + MLT1B LTR MaLR 5 360 -30 2091 154 36 39 chr2 1369564 1369927 -249317927 - THE1B LTR MaLR -2 362 1 280 249 90 57 chr2 1370814 1370991 -249316863 - L1ME3A LINE L1 -202 5968 5786 25 75 0 0 chr2 1371467 1371520 -249316334 + AT_rich Low_complexity Low_complexity 1 53 0 430 180 50 0 chr2 1372193 1372342 -249315512 + L1PBa LINE L1 1093 1394 -5469 * 4250 204 70 7 chr2 1372338 1373315 -249314539 - L1PBa LINE L1 -5820 1043 6 411 212 186 17 chr2 1374401 1374519 -249313335 + LTR40a LTR ERVL 1 138 -381 387 252 62 12 chr2 1374698 1374813 -249313041 + LTR40a LTR ERVL 251 414 -93 1886 157 165 11 chr2 1377875 1378245 -249309609 + MSTA LTR MaLR 1 427 -1 231 287 37 9 chr2 1378384 1378492 -249309362 + LTR67 LTR ERVL 444 554 -3 197 231 0 0 chr2 1378584 1378623 -249309231 + MIR SINE MIR 117 155 -107 1261 143 63 68 chr2 1379795 1380047 -249307807 - L1MA8 LINE L1 -422 5869 5619 479 135 0 0 chr2 1380047 1380121 -249307733 + L1MA7 LINE L1 6218 6291 0 1208 69 0 0 chr2 1381564 1381708 -249306146 + AluSp/q SINE Alu 161 304 -9 412 73 0 0 chr2 1381802 1381857 -249305997 - MLT2A2 LTR ERVL 0 453 399 763 98 14 43 chr2 1381857 1382229 -249305625 + (TA)n Simple_repeat Simple_repeat 1 361 0 2477 127 62 3 chr2 1382233 1382619 -249305235 - MLT2A2 LTR ERVL -44 409 1 2068 129 3 22 chr2 1382822 1383140 -249304714 + AluSx SINE Alu 1 312 0 219 324 0 14 chr2 1383362 1383436 -249304418 + A-rich Low_complexity Low_complexity 5 77 0 27 81 0 0 chr2 1383498 1383560 -249304294 + AT_rich Low_complexity Low_complexity 1 62 0 299 260 20 103 chr2 1383835 1383981 -249303873 - L2 LINE L2 0 3313 3180 2419 88 0 0 chr2 1384094 1384399 -249303455 - AluSc SINE Alu -4 305 1 183 167 0 0 chr2 1385938 1385980 -249301874 + GA-rich Low_complexity Low_complexity 2 43 0 787 176 0 0 chr2 1386115 1386240 -249301614 + AluJb SINE Alu 172 296 -16 391 300 29 19 chr2 1386357 1386567 -249301287 - HAL1 LINE L1 -282 2225 2014 21 71 0 0 chr2 1386633 1386675 -249301179 + AT_rich Low_complexity Low_complexity 1 42 0 346 220 18 28 chr2 1386772 1386881 -249300973 - L1MA9 LINE L1 -222 6090 5983 851 223 114 136 chr2 1387717 1387922 -249299932 - Charlie2 DNA MER1_type -51 2811 2603 2283 86 0 3 chr2 1387922 1388213 -249299641 + AluSx SINE Alu 1 290 -22 851 223 114 136 chr2 1388213 1389051 -249298803 - Charlie2 DNA MER1_type -259 2603 1791 620 179 32 0 chr2 1389067 1389190 -249298664 + L1MA4 LINE L1 6172 6298 -2 218 152 53 20 chr2 1389199 1389350 -249298504 + (TATAA)n Simple_repeat Simple_repeat 4 159 0 23 33 0 0 chr2 1389362 1389392 -249298462 + AT_rich Low_complexity Low_complexity 1 30 0 246 174 33 16 chr2 1389397 1389518 -249298336 + (TA)n Simple_repeat Simple_repeat 1 123 0 22 70 0 0 chr2 1389579 1389622 -249298232 + AT_rich Low_complexity Low_complexity 1 43 0 208 167 42 24 chr2 1389624 1389792 -249298062 + (TATAA)n Simple_repeat Simple_repeat 4 174 0 231 120 101 38 chr2 1389795 1389953 -249297901 + (TTATA)n Simple_repeat Simple_repeat 5 172 0 257 250 38 50 chr2 1390285 1390365 -249297489 + MER5A DNA MER1_type 106 184 -5 187 246 211 0 chr2 1390546 1390603 -249297251 + L2 LINE L2 3233 3301 -12 997 152 5 91 chr2 1390603 1390801 -249297053 + AluJo SINE Alu 84 264 -48 2321 70 13 20 chr2 1390868 1391170 -249296684 + AluSc SINE Alu 3 302 -7 315 0 0 0 chr2 1391736 1391771 -249296083 + (CA)n Simple_repeat Simple_repeat 2 36 0 763 216 0 8 chr2 1392481 1392615 -249295239 + FLAM_A SINE Alu 1 133 0 466 252 25 0 chr2 1392845 1392964 -249294890 - Charlie8 DNA MER1_type -2250 167 46 1809 158 127 82 chr2 1393387 1393850 -249294004 - MER74A LTR ERVL -60 498 15 23 0 0 0 chr2 1395148 1395171 -249292683 + GC_rich Low_complexity Low_complexity 1 23 0 236 53 26 0 chr2 1396173 1396211 -249291643 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1515 176 47 0 chr2 1396218 1396496 -249291358 - AluJo SINE Alu -21 291 1 304 231 15 0 chr2 1396498 1396563 -249291291 - MIR SINE MIR -106 102 37 2166 111 14 0 chr2 1397818 1398115 -249289739 + AluSx SINE Alu 1 301 -11 498 179 0 0 chr2 1398457 1398541 -249289313 + Alu SINE Alu 219 302 -9 1081 234 75 44 chr2 1398552 1398937 -249288917 + L1MC5 LINE L1 7521 7917 -44 2034 222 92 25 chr2 1398957 1399524 -249288330 + L1ME3A LINE L1 5554 6158 -12 30 0 0 0 chr2 1399524 1399554 -249288300 + AT_rich Low_complexity Low_complexity 1 30 0 1156 71 0 0 chr2 1399567 1399707 -249288147 + AluSq SINE Alu 33 172 -141 518 272 70 35 chr2 1400138 1400366 -249287488 - MIR SINE MIR -10 252 17 265 121 35 69 chr2 1401129 1401187 -249286667 - MLT1C LTR MaLR -411 56 1 966 191 0 0 chr2 1401790 1401947 -249285907 + FRAM SINE Alu 5 161 -5 1845 130 0 60 chr2 1403066 1403426 -249284428 - AluSx SINE Alu 0 342 1 2235 96 0 3 chr2 1403873 1404166 -249283688 - AluSx SINE Alu -3 309 18 2006 144 3 0 chr2 1404493 1404791 -249283063 - AluSx SINE Alu -13 299 1 297 281 111 79 chr2 1404808 1405162 -249282692 - L1MC4 LINE L1 -9 8033 7550 381 257 19 9 chr2 1405335 1405440 -249282414 - L1MC4 LINE L1 -1 8041 7936 286 250 95 27 chr2 1405445 1405593 -249282261 - L1MC4 LINE L1 -196 7846 7689 * 519 196 89 18 chr2 1405581 1405742 -249282112 - L1MC4 LINE L1 -385 7460 7254 341 252 53 73 chr2 1405747 1405824 -249282030 - L1MC4 LINE L1 -780 7262 7188 1850 166 0 13 chr2 1405824 1406126 -249281728 + AluJb SINE Alu 2 299 -13 341 252 53 73 chr2 1406126 1406199 -249281655 - L1MC4 LINE L1 -854 7188 7115 180 0 0 0 chr2 1406325 1406345 -249281509 + (A)n Simple_repeat Simple_repeat 1 20 0 1665 126 65 51 chr2 1406893 1407187 -249280667 - AluJb SINE Alu -14 298 1 239 143 102 0 chr2 1407736 1407785 -249280069 + L2 LINE L2 3248 3301 -12 2059 102 60 0 chr2 1408329 1408612 -249279242 + AluSx SINE Alu 1 300 -12 286 313 81 0 chr2 1408614 1408713 -249279141 - L2 LINE L2 -14 3299 3193 1058 184 40 0 chr2 1408951 1409179 -249278675 + L1MA4 LINE L1 6060 6296 -4 288 212 61 30 chr2 1409420 1409486 -249278368 + MIR SINE MIR 34 101 -107 284 299 118 16 chr2 1409514 1409641 -249278213 + MIR SINE MIR 93 232 -30 230 289 0 0 chr2 1410580 1410632 -249277222 + polypyrimidine Low_complexity Low_complexity 3 54 0 647 257 63 54 chr2 1410876 1411098 -249276756 + MER58A DNA MER1_type 1 224 0 351 314 102 44 chr2 1411109 1411335 -249276519 - L1MC4a LINE L1 -393 7415 7177 721 297 91 24 chr2 1411390 1411807 -249276047 - L1MC4 LINE L1 -881 7161 6717 22 0 0 0 chr2 1411966 1411988 -249275866 + AT_rich Low_complexity Low_complexity 1 22 0 391 203 183 110 chr2 1412326 1412572 -249275282 - LTR41 LTR ERVL -507 266 3 1303 274 90 37 chr2 1412576 1413312 -249274542 - L1MCc LINE L1 -4887 1536 935 1941 176 58 26 chr2 1413536 1413577 -249274277 - MLT2A2 LTR ERVL 0 554 516 450 0 0 0 chr2 1413577 1413627 -249274227 + (TA)n Simple_repeat Simple_repeat 2 51 0 1941 176 58 26 chr2 1413627 1414114 -249273740 - MLT2A2 LTR ERVL -38 516 1 1074 283 28 33 chr2 1414166 1414593 -249273261 - L1MCc LINE L1 -5985 438 14 392 386 48 21 chr2 1414595 1414932 -249272922 + L1MC/D LINE L1 5463 5808 -2000 594 278 7 0 chr2 1415207 1415351 -249272503 - MIR SINE MIR -51 211 67 183 139 0 0 chr2 1415660 1415696 -249272158 + (T)n Simple_repeat Simple_repeat 1 36 0 349 329 83 23 chr2 1415696 1415912 -249271942 - MLT1J LTR MaLR -247 264 36 2441 78 0 3 chr2 1416115 1416421 -249271433 - AluY SINE Alu -6 305 1 344 308 245 9 chr2 1416802 1417133 -249270721 - MLT1I LTR MaLR 0 409 1 30 45 0 0 chr2 1417150 1417194 -249270660 + AT_rich Low_complexity Low_complexity 1 44 0 283 313 46 28 chr2 1417984 1418201 -249269653 + LTR33 LTR ERVL 301 521 0 288 0 0 0 chr2 1418423 1418455 -249269399 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 241 238 109 30 chr2 1418693 1418794 -249269060 + LTR50 LTR ERVL 104 212 -583 635 261 188 12 chr2 1418797 1419142 -249268712 + LTR50 LTR ERVL 390 795 0 228 305 32 7 chr2 1421280 1421434 -249266420 - L1M4 LINE L1 -1456 4690 4533 1173 257 136 83 chr2 1421493 1421840 -249266014 - MLT1E3 LTR MaLR -2 622 230 1609 187 10 17 chr2 1421840 1422129 -249265725 - AluJo SINE Alu -25 287 1 1173 257 136 83 chr2 1422129 1422369 -249265485 - MLT1E3 LTR MaLR -394 230 4 2446 271 74 13 chr2 1422713 1423922 -249263932 + L1ME1 LINE L1 2583 3864 -2282 1623 228 19 71 chr2 1423931 1424449 -249263405 - MLT1D LTR MaLR -14 491 1 725 250 128 78 chr2 1424449 1424579 -249263275 + L1ME1 LINE L1 3860 3982 -2164 411 83 0 0 chr2 1424579 1424639 -249263215 + (CA)n Simple_repeat Simple_repeat 1 60 0 725 250 128 78 chr2 1424639 1425024 -249262830 + L1ME1 LINE L1 3982 4401 -1745 * 1659 256 34 34 chr2 1425022 1425902 -249261952 + L1ME1 LINE L1 4783 6103 -63 36 40 0 0 chr2 1425931 1425981 -249261873 + AT_rich Low_complexity Low_complexity 1 50 0 27 29 0 0 chr2 1426060 1426094 -249261760 + AT_rich Low_complexity Low_complexity 1 34 0 3642 221 20 7 chr2 1426248 1426960 -249260894 + MER44D DNA MER2_type 13 605 0 21 0 0 0 chr2 1426974 1426995 -249260859 + AT_rich Low_complexity Low_complexity 1 21 0 1527 116 0 22 chr2 1428268 1428492 -249259362 - AluSx SINE Alu -93 219 1 496 288 29 62 chr2 1428673 1428947 -249258907 - L2 LINE L2 -850 2464 2200 211 247 86 25 chr2 1429202 1429283 -249258571 - MIR SINE MIR -113 149 64 23 0 0 0 chr2 1429692 1429715 -249258139 + AT_rich Low_complexity Low_complexity 1 23 0 998 311 58 15 chr2 1430731 1431143 -249256711 + L2 LINE L2 2371 2800 -514 391 184 58 29 chr2 1431623 1431797 -249256057 + (TG)n Simple_repeat Simple_repeat 1 179 0 1412 123 21 16 chr2 1432056 1432299 -249255555 + L1MA6 LINE L1 6053 6296 -4 287 319 61 52 chr2 1432837 1433066 -249254788 + MLT1K LTR MaLR 340 570 -18 314 250 24 12 chr2 1434036 1434120 -249253734 - L2 LINE L2 -3 3310 3226 214 290 48 0 chr2 1434296 1434358 -249253496 + MIR SINE MIR 98 162 -100 39 0 0 0 chr2 1436189 1436228 -249251626 + AT_rich Low_complexity Low_complexity 1 39 0 23 33 0 0 chr2 1436527 1436557 -249251297 + AT_rich Low_complexity Low_complexity 1 30 0 641 163 0 7 chr2 1437741 1437882 -249249972 + GA-rich Low_complexity Low_complexity 3 142 0 273 119 0 0 chr2 1437875 1437917 -249249937 + (GGGA)n Simple_repeat Simple_repeat 3 44 0 * 772 151 0 27 chr2 1437952 1438137 -249249717 + GA-rich Low_complexity Low_complexity 1 180 0 821 180 16 5 chr2 1438160 1438566 -249249288 + GA-rich Low_complexity Low_complexity 1 410 0 204 194 0 0 chr2 1438579 1438615 -249249239 + GA-rich Low_complexity Low_complexity 3 38 0 476 279 86 96 chr2 1439049 1439444 -249248410 + HAL1 LINE L1 1119 1509 -998 266 197 197 70 chr2 1439504 1439599 -249248255 + MIR SINE MIR 105 225 -37 928 176 88 123 chr2 1439599 1439974 -249247880 - MLT1A1 LTR MaLR 0 365 4 266 197 197 70 chr2 1439974 1440007 -249247847 + MIR SINE MIR 225 252 -10 32 43 0 0 chr2 1440230 1440276 -249247578 + AT_rich Low_complexity Low_complexity 1 46 0 208 262 66 16 chr2 1440611 1440672 -249247182 - MIR SINE MIR -72 190 127 383 95 14 176 chr2 1440984 1441194 -249246660 + (TA)n Simple_repeat Simple_repeat 2 177 0 272 126 31 99 chr2 1441232 1441423 -249246431 + (TA)n Simple_repeat Simple_repeat 2 179 0 289 183 59 6 chr2 1441467 1441636 -249246218 + (TA)n Simple_repeat Simple_repeat 2 179 0 4134 150 37 6 chr2 1442245 1442966 -249244888 - MER49 LTR ERV1 -9 914 171 217 211 40 13 chr2 1442966 1443042 -249244812 + (TG)n Simple_repeat Simple_repeat 1 78 0 29 0 0 0 chr2 1443260 1443289 -249244565 + AT_rich Low_complexity Low_complexity 1 29 0 802 317 46 19 chr2 1444349 1444718 -249243136 - MLT1J LTR MaLR -20 491 113 2008 157 0 0 chr2 1445059 1445353 -249242501 - AluSg SINE Alu -16 294 1 2209 100 3 7 chr2 1445453 1445754 -249242100 + AluSx SINE Alu 1 300 -12 225 0 0 0 chr2 1445903 1445928 -249241926 + (A)n Simple_repeat Simple_repeat 1 25 0 2306 173 28 16 chr2 1446839 1447266 -249240588 + Tigger2a DNA MER2_type 3 434 0 715 140 0 0 chr2 1448211 1448318 -249239536 + AluSq/x SINE Alu 1 107 -205 22 0 0 0 chr2 1448357 1448379 -249239475 + AT_rich Low_complexity Low_complexity 1 22 0 1537 251 92 11 chr2 1448578 1449013 -249238841 + L1MDa LINE L1 3 472 -6068 638 191 0 20 chr2 1449090 1449237 -249238617 + L1MD1 LINE L1 6099 6242 0 363 108 0 77 chr2 1449379 1449444 -249238410 - MLT2B1 LTR ERVL -348 66 7 272 346 0 0 chr2 1450229 1450333 -249237521 + GA-rich Low_complexity Low_complexity 3 106 0 1063 267 18 7 chr2 1450931 1451204 -249236650 + L1M4c LINE L1 1 276 -6108 273 130 0 0 chr2 1451196 1451242 -249236612 + L1M4c LINE L1 1442 1487 -4897 * 27 29 0 0 chr2 1451327 1451361 -249236493 + AT_rich Low_complexity Low_complexity 1 34 0 214 191 0 0 chr2 1451485 1451527 -249236327 + A-rich Low_complexity Low_complexity 1 42 0 1057 259 73 79 chr2 1452245 1453786 -249234068 + L1MDa LINE L1 1128 2622 -3918 683 260 82 86 chr2 1453908 1453969 -249233885 + L1MDa LINE L1 2715 2775 -3765 1653 160 60 41 chr2 1453969 1454337 -249233517 + THE1C LTR MaLR 1 375 0 8592 153 18 43 chr2 1454339 1455957 -249231897 + THE1C-int LTR MaLR 3 1580 0 1490 167 53 61 chr2 1455957 1456335 -249231519 + THE1C LTR MaLR 1 375 0 683 260 82 86 chr2 1456335 1457022 -249230832 + L1MDa LINE L1 2775 3465 -3075 3607 146 30 8 chr2 1457022 1457678 -249230176 + L1MA8 LINE L1 5621 6291 0 683 260 82 86 chr2 1457678 1457909 -249229945 + L1MDa LINE L1 3465 3695 -2845 824 187 55 55 chr2 1457923 1458142 -249229712 - MER20 DNA MER1_type 0 219 1 668 311 28 21 chr2 1458242 1458367 -249229487 + L1MDa LINE L1 3820 3943 -2597 567 113 0 0 chr2 1458367 1458447 -249229407 - MADE1 DNA Mariner 0 80 1 668 311 28 21 chr2 1458447 1458710 -249229144 + L1MDa LINE L1 3943 4211 -2329 205 266 0 0 chr2 1458737 1458801 -249229053 + A-rich Low_complexity Low_complexity 1 64 0 1972 151 0 0 chr2 1458909 1459213 -249228641 + AluSx SINE Alu 6 309 -3 2222 109 3 0 chr2 1459219 1459522 -249228332 + AluSg SINE Alu 1 304 -6 27 29 0 0 chr2 1459658 1459692 -249228162 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr2 1459917 1459938 -249227916 + AT_rich Low_complexity Low_complexity 1 21 0 427 79 0 16 chr2 1459995 1460058 -249227796 - MADE1 DNA Mariner -18 62 1 271 258 44 38 chr2 1460074 1460233 -249227621 + L1MDa LINE L1 4894 5053 -1487 719 230 143 15 chr2 1460690 1460955 -249226899 - MER46C DNA MER2_type -39 299 1 655 182 64 51 chr2 1461146 1461356 -249226498 - MLT1B LTR MaLR 0 390 173 24 67 0 0 chr2 1461658 1461703 -249226151 + AT_rich Low_complexity Low_complexity 1 45 0 209 185 15 0 chr2 1461777 1461842 -249226012 + (TAG)n Simple_repeat Simple_repeat 3 68 0 693 288 45 0 chr2 1461844 1462042 -249225812 - MIR SINE MIR 0 262 56 234 169 0 84 chr2 1462388 1462459 -249225395 + MLT1H LTR MaLR 478 549 0 767 67 0 29 chr2 1462714 1462818 -249225036 + AluSg1 SINE Alu 1 101 -208 835 137 0 0 chr2 1463325 1463449 -249224405 + AluSg/x SINE Alu 154 277 -33 270 95 0 0 chr2 1463449 1463491 -249224363 + (CA)n Simple_repeat Simple_repeat 1 42 0 230 264 0 11 chr2 1464735 1464826 -249223028 + CT-rich Low_complexity Low_complexity 3 92 0 2175 116 0 3 chr2 1465192 1465512 -249222342 - AluSq SINE Alu 0 313 1 3136 213 50 3 chr2 1465560 1466254 -249221600 - MER44D DNA MER2_type -6 599 1 24 0 0 0 chr2 1469897 1469921 -249217933 + AT_rich Low_complexity Low_complexity 1 24 0 226 273 146 64 chr2 1471031 1471141 -249216713 - L2 LINE L2 -21 3251 3133 1853 100 93 4 chr2 1471793 1472093 -249215761 - AluSx SINE Alu 0 312 1 3289 114 16 0 chr2 1472125 1472632 -249215222 - L1PA13 LINE L1 -15 6148 5634 963 145 0 0 chr2 1472928 1473279 -249214575 + (TG)n Simple_repeat Simple_repeat 2 530 0 31 58 0 0 chr2 1473760 1473812 -249214042 + AT_rich Low_complexity Low_complexity 1 52 0 231 283 58 80 chr2 1474241 1474379 -249213475 - L2 LINE L2 -561 2753 2619 22 35 0 0 chr2 1475013 1475042 -249212812 + AT_rich Low_complexity Low_complexity 1 29 0 241 329 0 12 chr2 1476223 1476308 -249211546 + L2 LINE L2 3186 3269 -3 267 316 101 29 chr2 1476526 1476665 -249211189 - L2 LINE L2 0 3313 3165 351 180 0 0 chr2 1476703 1476764 -249211090 - Tigger5 DNA MER2_type 0 2323 2263 878 138 0 63 chr2 1476764 1476938 -249210916 + Tigger1 DNA MER2_type 1 163 -2255 * 1039 151 47 24 chr2 1476919 1477131 -249210723 + Tigger1 DNA MER2_type 2202 2418 0 1001 164 0 0 chr2 1477131 1477308 -249210546 - Tigger5 DNA MER2_type -59 2264 2088 328 180 16 0 chr2 1477332 1477393 -249210461 - Tigger5 DNA MER2_type -2261 62 1 364 317 145 6 chr2 1477594 1477938 -249209916 - L2 LINE L2 -376 2938 2547 192 358 15 60 chr2 1478318 1478452 -249209402 - L2 LINE L2 -265 3007 2880 224 122 24 0 chr2 1478592 1478633 -249209221 + (CA)n Simple_repeat Simple_repeat 1 42 0 391 282 79 54 chr2 1478634 1479044 -249208810 - MLT1L LTR MaLR -40 533 151 940 232 84 58 chr2 1479154 1479282 -249208572 + MLT1A2 LTR MaLR 6 129 -245 2444 61 0 3 chr2 1479282 1479575 -249208279 - AluY SINE Alu -19 292 1 940 232 84 58 chr2 1479575 1479791 -249208063 + MLT1A2 LTR MaLR 129 359 -15 336 266 148 0 chr2 1479930 1480058 -249207796 - MIR SINE MIR -12 250 104 1391 128 30 8 chr2 1480501 1480735 -249207119 + MSTB1 LTR MaLR 193 431 -1 185 393 28 9 chr2 1481579 1481686 -249206168 - MER5A DNA MER1_type -79 110 2 3437 57 40 2 chr2 1482606 1483060 -249204794 + L1PA8 LINE L1 5694 6164 -8 243 263 0 84 chr2 1483685 1483780 -249204074 + MER5A DNA MER1_type 55 141 -48 1935 301 133 50 chr2 1485998 1487407 -249200447 - L2 LINE L2 -545 2769 1244 1983 228 12 12 chr2 1487408 1487926 -249199928 - L1 LINE L1 -2302 3844 3327 409 109 0 0 chr2 1487926 1487990 -249199864 - L1 LINE L1 -3126 3020 2957 2138 128 26 64 chr2 1488004 1488504 -249199350 + L1PB4 LINE L1 5254 5734 -422 588 179 0 0 chr2 1488506 1488612 -249199242 + L1PB4 LINE L1 5835 5940 -216 845 168 0 0 chr2 1488629 1488748 -249199106 + FLAM_C SINE Alu 6 124 -19 839 234 0 10 chr2 1488764 1488956 -249198898 + L1PB4 LINE L1 5964 6153 -3 2113 127 0 3 chr2 1488966 1489266 -249198588 + AluSg SINE Alu 1 299 -11 323 221 15 0 chr2 1489266 1489334 -249198520 - L2 LINE L2 -2068 1246 1178 366 232 111 0 chr2 1489995 1490094 -249197760 + MIR SINE MIR 153 262 0 2185 96 6 13 chr2 1490342 1490655 -249197199 + AluY SINE Alu 1 311 0 10994 166 25 40 chr2 1492053 1495030 -249192824 + L1M1 LINE L1 22 3627 -3938 21791 130 14 77 chr2 1495039 1495439 -249192415 + L1P LINE L1 1 424 -5722 204 67 0 0 chr2 1495439 1495469 -249192385 + (TTG)n Simple_repeat Simple_repeat 2 31 0 21791 130 14 77 chr2 1495469 1499605 -249188249 + L1P LINE L1 424 4254 -1892 5867 66 19 0 chr2 1499605 1500370 -249187484 + L1PA7 LINE L1 5369 6153 -1 9409 205 12 4 chr2 1500370 1502502 -249185352 + L1M1 LINE L1 3641 5788 -1777 46 19 0 0 chr2 1502514 1502567 -249185287 + AT_rich Low_complexity Low_complexity 1 53 0 2681 71 14 6 chr2 1502725 1503090 -249184764 - L1PB1 LINE L1 -7 6144 5777 725 225 31 0 chr2 1503713 1503873 -249183981 - MER45A DNA AcHobo -10 168 4 341 340 95 16 chr2 1503874 1504247 -249183607 + ERVL LTR ERVL 4674 5114 -528 432 299 121 17 chr2 1504596 1504894 -249182960 + LTR16A LTR ERVL 16 344 -106 899 317 37 24 chr2 1505282 1506218 -249181636 - HERV16 LTR ERVL -2347 2649 1674 413 383 44 0 chr2 1506249 1506500 -249181354 - HERV16 LTR ERVL -3418 1578 1317 1653 163 73 12 chr2 1507259 1507602 -249180252 - MLT1A1 LTR MaLR 0 365 2 27 0 0 0 chr2 1509974 1510001 -249177853 + AT_rich Low_complexity Low_complexity 1 27 0 1061 268 34 54 chr2 1510022 1510556 -249177298 + MER119 DNA MER1_type 51 573 -10 1238 145 108 0 chr2 1511380 1511621 -249176233 + L1MC1 LINE L1 6065 6331 -2 187 250 0 0 chr2 1512591 1512631 -249175223 - MER5A DNA MER1_type -22 167 128 364 118 61 19 chr2 1512879 1513099 -249174755 + (TAGA)n Simple_repeat Simple_repeat 1 229 0 346 287 42 75 chr2 1513310 1513575 -249174279 + L1M4 LINE L1 3545 3800 -2346 1902 158 6 16 chr2 1513997 1514308 -249173546 - AluJb SINE Alu -3 309 2 302 289 29 0 chr2 1514313 1514417 -249173437 + HAL1b LINE L1 1241 1347 -1 452 315 164 6 chr2 1514446 1514770 -249173084 - L1ME4a LINE L1 -7 6114 5740 304 256 0 26 chr2 1515149 1515227 -249172627 + MIR SINE MIR 68 143 -119 2255 112 0 0 chr2 1516677 1516971 -249170883 + AluSg1 SINE Alu 1 294 -15 2433 102 120 5 chr2 1517063 1517446 -249170408 - MSTA LTR MaLR -1 427 1 218 357 48 0 chr2 1518210 1518294 -249169560 - L2 LINE L2 -94 3178 3091 5180 50 8 2 chr2 1518416 1518428 -249169426 - L1PA8 LINE L1 -5 6167 6157 279 0 0 0 chr2 1518428 1518459 -249169395 + (TA)n Simple_repeat Simple_repeat 1 31 0 5180 50 8 2 chr2 1518459 1519090 -249168764 - L1PA8 LINE L1 -15 6157 5520 245 202 44 79 chr2 1519112 1519226 -249168628 - L1ME4a LINE L1 -462 5659 5550 230 276 201 22 chr2 1519682 1519816 -249168038 + MIR SINE MIR 71 228 -34 669 136 149 19 chr2 1519876 1520030 -249167824 + MSTA LTR MaLR 224 397 -31 1928 152 10 3 chr2 1520083 1520379 -249167475 - AluSx SINE Alu -14 298 1 939 276 121 27 chr2 1520620 1521099 -249166755 - L1ME1 LINE L1 -50 6116 5593 737 247 13 31 chr2 1521097 1521324 -249166530 + L1MEc LINE L1 45 267 -6129 * 709 273 41 9 chr2 1521317 1521658 -249166196 + L1MEc LINE L1 2306 2657 -3558 * 296 229 84 0 chr2 1521666 1521749 -249166105 - L1M4 LINE L1 -3419 2727 2638 1973 266 35 38 chr2 1521761 1522599 -249165255 - MLT1D-int LTR MaLR -534 837 3 1945 136 14 33 chr2 1522605 1522966 -249164888 - THE1B LTR MaLR -10 354 1 2522 103 12 18 chr2 1522966 1523365 -249164489 - THE1B-int LTR MaLR 0 1580 1184 1657 238 41 19 chr2 1523374 1523858 -249163996 - MLT1D LTR MaLR -8 497 3 338 293 136 0 chr2 1524568 1524708 -249163146 - MIR SINE MIR -1 261 103 223 304 72 0 chr2 1525309 1525378 -249162476 + MIR SINE MIR 98 171 -91 21 71 0 0 chr2 1525661 1525703 -249162151 + AT_rich Low_complexity Low_complexity 1 42 0 2345 84 7 0 chr2 1526107 1526405 -249161449 + AluSg SINE Alu 6 305 -5 193 349 77 31 chr2 1526406 1526601 -249161253 - L2 LINE L2 -546 2768 2565 725 86 48 0 chr2 1526649 1526754 -249161100 + AluSg/x SINE Alu 189 298 -12 768 213 26 31 chr2 1527252 1527499 -249160355 - L1MA9 LINE L1 -6 6285 6042 26 0 0 0 chr2 1529498 1529524 -249158330 + AT_rich Low_complexity Low_complexity 1 26 0 2318 102 6 10 chr2 1529600 1529914 -249157940 - AluSq SINE Alu 0 313 1 681 216 14 56 chr2 1530345 1530558 -249157296 - MER3 DNA MER1_type -4 205 2 1804 27 5 0 chr2 1530812 1531031 -249156823 - L1PA4 LINE L1 -1 6154 5935 772 11 0 0 chr2 1531031 1531121 -249156733 + L1PA5 LINE L1 5795 5884 -270 202 204 0 23 chr2 1531283 1531327 -249156527 - L2 LINE L2 -4 3309 3267 180 0 0 0 chr2 1532036 1532056 -249155798 + (A)n Simple_repeat Simple_repeat 1 20 0 1802 158 3 34 chr2 1532593 1532915 -249154939 - AluJb SINE Alu 0 312 1 197 331 0 66 chr2 1532953 1533074 -249154780 - L2 LINE L2 -188 3125 3013 198 0 0 0 chr2 1533077 1533099 -249154755 + (GGAGA)n Simple_repeat Simple_repeat 5 26 0 2145 131 0 0 chr2 1533824 1534115 -249153739 - AluSx SINE Alu -21 291 1 1906 47 0 0 chr2 1534408 1534641 -249153213 - L1PA7 LINE L1 -3 6151 5919 321 314 83 70 chr2 1534732 1535118 -249152736 + L1 LINE L1 3850 4240 -1906 368 325 145 21 chr2 1535164 1535632 -249152222 + L1 LINE L1 4312 4837 -1309 1047 197 33 44 chr2 1535632 1535753 -249152101 - MLT1C LTR MaLR -3 464 343 1970 128 60 28 chr2 1535753 1536106 -249151748 + THE1B LTR MaLR 1 364 0 1047 197 33 44 chr2 1536106 1536258 -249151596 - MLT1C LTR MaLR -124 343 194 434 209 62 16 chr2 1536274 1536323 -249151531 - MLT1C LTR MaLR -332 135 90 1253 191 38 107 chr2 1536323 1536715 -249151139 + MLT1A1 LTR MaLR 1 365 0 434 209 62 16 chr2 1536715 1536794 -249151060 - MLT1C LTR MaLR -377 90 1 182 387 84 0 chr2 1537597 1537716 -249150138 - L3 LINE CR1 -101 1476 1348 183 129 0 0 chr2 1537983 1538014 -249149840 + (TG)n Simple_repeat Simple_repeat 2 32 0 314 255 113 19 chr2 1538323 1538429 -249149425 - MER63A DNA MER1_type -3 207 92 189 325 45 57 chr2 1538478 1538635 -249149219 - L3 LINE CR1 -523 1054 900 225 277 155 26 chr2 1538750 1538905 -249148949 - HAL1 LINE L1 0 2507 2333 1243 246 54 31 chr2 1538920 1539269 -249148585 + MLT1A2 LTR MaLR 18 374 0 2554 120 3 3 chr2 1539320 1539695 -249148159 - THE1C LTR MaLR 0 375 1 10074 121 32 7 chr2 1539695 1541236 -249146618 - THE1C-int LTR MaLR 0 1580 1 1217 134 19 14 chr2 1541236 1541452 -249146402 - THE1C LTR MaLR 0 375 159 478 321 67 30 chr2 1541453 1541721 -249146133 - HAL1 LINE L1 -1995 512 235 596 294 110 30 chr2 1541728 1542163 -249145691 - L2 LINE L2 -411 2903 2434 21 36 0 0 chr2 1543717 1543745 -249144109 + AT_rich Low_complexity Low_complexity 1 28 0 309 323 119 27 chr2 1543789 1544083 -249143771 + L1 LINE L1 4508 4828 -1318 362 251 6 0 chr2 1544771 1544950 -249142904 + CT-rich Low_complexity Low_complexity 1 180 0 1445 181 24 38 chr2 1545727 1546019 -249141835 + AluJb SINE Alu 6 293 -19 305 274 129 8 chr2 1546683 1546807 -249141047 + MIR3 SINE MIR 31 169 -39 32 43 0 0 chr2 1547501 1547547 -249140307 + AT_rich Low_complexity Low_complexity 1 46 0 492 386 58 11 chr2 1547682 1548115 -249139739 - L2 LINE L2 -2139 1175 723 209 268 24 37 chr2 1548161 1548243 -249139611 - L2 LINE L2 -1316 1998 1918 180 0 0 0 chr2 1549568 1549588 -249138266 + (T)n Simple_repeat Simple_repeat 1 20 0 279 277 193 0 chr2 1549807 1549926 -249137928 + MIR SINE MIR 86 227 -35 291 29 0 0 chr2 1549961 1549996 -249137858 + U2 snRNA snRNA 1 35 -153 757 221 16 5 chr2 1550718 1550908 -249136946 - MLT1A2 LTR MaLR -2 372 181 2149 96 4 0 chr2 1550932 1551204 -249136650 - AluY SINE Alu -13 298 26 497 191 133 0 chr2 1551355 1551460 -249136394 - MLT1A2 LTR MaLR -255 119 1 496 250 114 5 chr2 1552744 1552964 -249134890 - LTR50 LTR ERVL 0 795 552 1088 90 13 0 chr2 1552967 1553123 -249134731 + LTR19A LTR ERV1 288 445 -41 216 86 0 0 chr2 1553124 1553159 -249134695 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 379 246 210 6 chr2 1553241 1553401 -249134453 - LTR50 LTR ERVL -330 465 272 1223 243 144 68 chr2 1553401 1553805 -249134049 + MLT1F1 LTR MaLR 1 456 -111 2746 168 10 12 chr2 1553805 1554292 -249133562 - MER66B LTR ERV1 0 486 1 1223 243 144 68 chr2 1554292 1554414 -249133440 + MLT1F1 LTR MaLR 456 567 0 2166 249 62 32 chr2 1555127 1556204 -249131650 - L1M4 LINE L1 -1031 5115 4007 542 244 53 22 chr2 1556233 1556458 -249131396 + L1M4 LINE L1 4417 4648 -1498 200 139 13 114 chr2 1556741 1556820 -249131034 + A-rich Low_complexity Low_complexity 3 73 0 1605 274 76 32 chr2 1557543 1558410 -249129444 - L1ME3A LINE L1 -10 6160 5258 1429 206 107 28 chr2 1558512 1558601 -249129253 + MER70A LTR ERVL 49 130 -342 1982 119 88 23 chr2 1558601 1558953 -249128901 - THE1C LTR MaLR 0 375 1 1429 206 107 28 chr2 1558953 1559256 -249128598 + MER70A LTR ERVL 130 472 0 5562 177 32 37 chr2 1559263 1560285 -249127569 - L1MB1 LINE L1 -81 6087 5062 2456 86 0 0 chr2 1560285 1560586 -249127268 + AluY SINE Alu 1 301 -10 5562 177 32 37 chr2 1560586 1561729 -249126125 - L1MB1 LINE L1 -1106 5062 3928 198 355 12 70 chr2 1562338 1562510 -249125344 - L2 LINE L2 -182 3090 2929 907 185 67 6 chr2 1562729 1562907 -249124947 - MER5A DNA MER1_type 0 189 1 396 283 83 21 chr2 1563581 1563726 -249124128 + MIR SINE MIR 72 225 -37 1902 157 10 3 chr2 1563893 1564199 -249123655 - AluSx SINE Alu -4 308 1 237 246 79 44 chr2 1565513 1565627 -249122227 - MIR SINE MIR -5 257 140 198 301 14 27 chr2 1565670 1565743 -249122111 - MIR SINE MIR -121 141 70 21 0 0 0 chr2 1566219 1566240 -249121614 + AT_rich Low_complexity Low_complexity 1 21 0 277 260 85 8 chr2 1566390 1566509 -249121345 + MIR SINE MIR 57 186 -68 189 260 31 94 chr2 1568459 1568555 -249119299 - L2 LINE L2 -242 3030 2941 1142 258 35 29 chr2 1569173 1569549 -249118305 - L1ME3A LINE L1 -197 5973 5596 337 219 27 0 chr2 1569543 1569616 -249118238 + L1ME LINE L1 5573 5647 -519 * 1978 114 92 33 chr2 1569653 1570013 -249117841 - MSTA LTR MaLR -47 381 1 357 64 0 0 chr2 1570013 1570060 -249117794 + L1ME LINE L1 5643 5689 -477 784 344 61 44 chr2 1570060 1570198 -249117656 - L1MEc LINE L1 -4827 1569 1435 2421 117 17 6 chr2 1570198 1570558 -249117296 - THE1B LTR MaLR 0 364 1 784 344 61 44 chr2 1570558 1571174 -249116680 - L1MEc LINE L1 -4961 1435 802 219 277 91 130 chr2 1572176 1572584 -249115270 + L3 LINE CR1 1083 1474 -103 199 154 19 19 chr2 1573219 1573271 -249114583 + (TAA)n Simple_repeat Simple_repeat 3 54 0 287 340 47 0 chr2 1573363 1573469 -249114385 - MIR SINE MIR -67 141 31 196 269 156 54 chr2 1574491 1574677 -249113177 - MIR SINE MIR -26 236 32 214 403 8 8 chr2 1575139 1575263 -249112591 + MIR SINE MIR 25 148 -114 593 88 0 0 chr2 1576316 1576396 -249111458 + MADE1 DNA Mariner 1 80 0 230 200 0 33 chr2 1577774 1577834 -249110020 - L1MC4 LINE L1 -1339 6703 6646 1815 254 106 89 chr2 1578341 1579500 -249108354 + MER69B DNA AcHobo 8 1186 -40 878 286 119 11 chr2 1579641 1580018 -249107836 - LTR16C LTR ERVL 0 491 74 22 0 0 0 chr2 1580890 1580912 -249106942 + AT_rich Low_complexity Low_complexity 1 22 0 5058 41 3 3 chr2 1581257 1581872 -249105982 - L1PA5 LINE L1 -1 6153 5539 1005 67 0 7 chr2 1581872 1582007 -249105847 + L1P LINE L1 2221 2354 -3792 240 330 52 10 chr2 1582156 1582253 -249105601 + L2 LINE L2 3172 3272 0 198 0 0 0 chr2 1583005 1583027 -249104827 + (TAAA)n Simple_repeat Simple_repeat 1 22 0 2319 105 13 0 chr2 1583336 1583641 -249104213 + AluSx SINE Alu 1 309 -3 378 146 31 52 chr2 1585390 1585486 -249102368 - MLT1K LTR MaLR -4 584 491 4657 219 38 36 chr2 1585507 1586728 -249101126 + L1PA16 LINE L1 4124 5346 -800 3548 29 0 0 chr2 1586724 1587138 -249100716 + L1PA5 LINE L1 5611 6024 -130 * 2738 166 144 11 chr2 1587242 1587798 -249100056 + L1PA16 LINE L1 5535 6164 -2 243 304 14 0 chr2 1588024 1588093 -249099761 - MLT1K LTR MaLR -387 201 132 2766 204 76 40 chr2 1588595 1589481 -249098373 - L1MDa LINE L1 -4018 2522 1605 914 317 3 26 chr2 1589520 1589861 -249097993 - L1MDa LINE L1 -6145 395 63 207 366 41 24 chr2 1590290 1590413 -249097441 + MIR SINE MIR 20 144 -118 33 43 0 0 chr2 1592370 1592417 -249095437 + AT_rich Low_complexity Low_complexity 1 47 0 232 97 56 14 chr2 1592440 1592512 -249095342 + (TTATA)n Simple_repeat Simple_repeat 5 79 0 25 0 0 0 chr2 1592532 1592557 -249095297 + AT_rich Low_complexity Low_complexity 1 25 0 347 120 57 34 chr2 1592564 1592739 -249095115 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 41 36 0 0 chr2 1592748 1592803 -249095051 + AT_rich Low_complexity Low_complexity 1 55 0 1499 251 101 25 chr2 1593447 1594323 -249093531 - Charlie2a DNA MER1_type -1252 1610 632 2071 113 0 0 chr2 1594702 1595058 -249092796 + AluSx SINE Alu 1 356 0 1500 140 61 0 chr2 1595317 1595581 -249092273 - L1PA15 LINE L1 -6 6159 5880 276 111 0 0 chr2 1597277 1597322 -249090532 + (TG)n Simple_repeat Simple_repeat 1 45 0 217 303 118 17 chr2 1600349 1600468 -249087386 + MIR SINE MIR 21 151 -57 251 338 23 15 chr2 1600562 1600695 -249087159 + MIR SINE MIR 21 154 -108 286 292 15 8 chr2 1600841 1600971 -249086883 + (TA)n Simple_repeat Simple_repeat 2 132 0 27 81 0 0 chr2 1601721 1601783 -249086071 + AT_rich Low_complexity Low_complexity 1 62 0 486 288 22 84 chr2 1602819 1603045 -249084809 + MIR SINE MIR 30 241 -21 12816 214 64 26 chr2 1604605 1607283 -249080571 - L1MA8 LINE L1 -6 7245 4670 2144 101 7 3 chr2 1607283 1607615 -249080239 + AluSx SINE Alu 1 333 0 12816 214 64 26 chr2 1607615 1608119 -249079735 - L1MA8 LINE L1 -2581 4670 4186 231 36 0 0 chr2 1608119 1608147 -249079707 + (CA)n Simple_repeat Simple_repeat 2 29 0 12816 214 64 26 chr2 1608147 1609189 -249078665 - L1MA8 LINE L1 -3065 4186 3185 1516 189 11 25 chr2 1609189 1609474 -249078380 + AluJo SINE Alu 1 281 -31 297 0 0 0 chr2 1609482 1609515 -249078339 + (TAAA)n Simple_repeat Simple_repeat 4 36 0 12816 214 64 26 chr2 1609515 1610749 -249077105 - L1MA8 LINE L1 -4072 3179 1782 2269 110 3 0 chr2 1610749 1611058 -249076796 - AluSg SINE Alu 0 310 1 12816 214 64 26 chr2 1611058 1611809 -249076045 - L1MA8 LINE L1 -5469 1782 1061 31 26 0 0 chr2 1612272 1612310 -249075544 + AT_rich Low_complexity Low_complexity 1 38 0 319 333 60 20 chr2 1613055 1613205 -249074649 - MIR SINE MIR -88 174 19 1352 287 100 22 chr2 1614855 1615357 -249072497 + MLT1F LTR MaLR 1 541 -1 1639 158 55 7 chr2 1615482 1615754 -249072100 + LTR32 LTR ERVL 21 305 -166 25 75 0 0 chr2 1615965 1616018 -249071836 + AT_rich Low_complexity Low_complexity 1 53 0 216 182 0 0 chr2 1616222 1616266 -249071588 + CT-rich Low_complexity Low_complexity 1 44 0 189 196 0 0 chr2 1616271 1616317 -249071537 + (TCCA)n Simple_repeat Simple_repeat 3 48 0 1744 198 78 16 chr2 1616469 1616852 -249071002 + MLT2C2 LTR ERVL 1 407 -57 509 145 0 0 chr2 1616894 1616970 -249070884 + HSMAR2 DNA Mariner 645 720 -582 1612 166 39 65 chr2 1616970 1617355 -249070499 - THE1C LTR MaLR 0 375 1 7002 194 115 4 chr2 1617355 1618839 -249069015 - THE1C-int LTR MaLR 0 1651 3 944 157 6 18 chr2 1618842 1619008 -249068846 - THE1C LTR MaLR -4 371 208 1370 214 25 4 chr2 1619008 1619288 -249068566 - MER101B-int LTR ERV1 -6045 286 1 249 223 43 75 chr2 1619942 1620036 -249067818 - MER101B LTR ERV1 -9 561 471 1140 165 38 104 chr2 1620137 1620453 -249067401 - MER101B LTR ERV1 -275 295 1 1846 143 49 0 chr2 1620500 1620787 -249067067 + AluSx SINE Alu 1 301 -11 22 0 0 0 chr2 1620939 1620961 -249066893 + AT_rich Low_complexity Low_complexity 1 22 0 4859 152 19 14 chr2 1620965 1621795 -249066059 - L1PA16 LINE L1 -7 6159 5326 2782 205 8 2 chr2 1621798 1622393 -249065461 + L1P LINE L1 4698 5296 -858 21 82 0 0 chr2 1622393 1622442 -249065412 + AT_rich Low_complexity Low_complexity 1 49 0 184 344 11 44 chr2 1622623 1622713 -249065141 - L2 LINE L2 0 3272 3186 2377 100 0 0 chr2 1624661 1624962 -249062892 + AluSx SINE Alu 1 301 -11 43 76 0 0 chr2 1625028 1625120 -249062734 + AT_rich Low_complexity Low_complexity 1 92 0 308 173 73 100 chr2 1625294 1625404 -249062450 - MLT1F LTR MaLR -433 109 3 2744 132 144 33 chr2 1625594 1626134 -249061720 + MER4A LTR ERV1 1 600 0 29 28 0 0 chr2 1626304 1626340 -249061514 + AT_rich Low_complexity Low_complexity 1 36 0 1061 274 79 48 chr2 1626593 1627474 -249060380 - L1ME3 LINE L1 -2 6160 5239 33 25 0 0 chr2 1627564 1627604 -249060250 + AT_rich Low_complexity Low_complexity 1 40 0 11190 179 25 27 chr2 1627607 1627742 -249060112 - L1MA4 LINE L1 -24 7695 7561 1061 104 31 0 chr2 1627742 1627905 -249059949 - L1PA10 LINE L1 -2 6166 5999 11190 179 25 27 chr2 1627905 1628302 -249059552 - L1MA4 LINE L1 -158 7561 7164 2375 81 0 7 chr2 1628302 1628611 -249059243 - AluY SINE Alu -3 308 2 11190 179 25 27 chr2 1628611 1631368 -249056486 - L1MA4 LINE L1 -555 7164 4422 1532 178 79 34 chr2 1631371 1631782 -249056072 + THE1C LTR MaLR 1 375 0 985 198 18 0 chr2 1631782 1631999 -249055855 - L1MA4 LINE L1 -3142 4423 4203 1195 175 123 26 chr2 1631999 1632262 -249055592 - MSTA LTR MaLR 0 428 140 1697 102 159 8 chr2 1632262 1632603 -249055251 - LTR7 LTR ERV1 0 450 1 688 200 0 0 chr2 1632607 1632732 -249055122 - MSTA LTR MaLR -301 125 1 7518 213 49 5 chr2 1632734 1634309 -249053545 - MSTB-int LTR MaLR -5 1646 3 1921 189 83 8 chr2 1634311 1634707 -249053147 - MSTB LTR MaLR 0 426 1 8868 199 41 55 chr2 1634707 1635885 -249051969 - L1MA4 LINE L1 -3358 4207 3013 1584 188 3 20 chr2 1635885 1636178 -249051676 - AluJb SINE Alu -24 288 1 8868 199 41 55 chr2 1636178 1636376 -249051478 - L1MA4 LINE L1 -4552 3013 2814 279 0 0 0 chr2 1636376 1636407 -249051447 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 8868 199 41 55 chr2 1636407 1638599 -249049255 - L1MA4 LINE L1 -4751 2814 12 1056 257 107 59 chr2 1638684 1639623 -249048231 - L1M4 LINE L1 -1053 5093 4110 320 242 33 33 chr2 1639686 1639777 -249048077 - L1MC4 LINE L1 -479 7563 7473 1316 285 79 31 chr2 1639993 1640909 -249046945 - L1M4 LINE L1 -1264 4951 3992 457 276 84 54 chr2 1640957 1641483 -249046371 - L1MEc LINE L1 -3630 2585 2086 21 0 0 0 chr2 1641729 1641750 -249046104 + AT_rich Low_complexity Low_complexity 1 21 0 1900 166 7 0 chr2 1642013 1642314 -249045540 + AluSx SINE Alu 1 303 -9 2123 119 3 19 chr2 1642450 1642761 -249045093 - AluSx SINE Alu -6 306 1 194 0 39 0 chr2 1643075 1643101 -249044753 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1680 231 44 20 chr2 1643215 1643666 -249044188 + MLT1C LTR MaLR 6 467 0 697 302 91 28 chr2 1644231 1644516 -249043338 + MLT1H1 LTR MaLR 1 303 -252 514 228 37 29 chr2 1644578 1644714 -249043140 + MER58B DNA MER1_type 204 340 -1 359 233 95 9 chr2 1644803 1644925 -249042929 + MLT1H1 LTR MaLR 433 554 -1 667 292 56 9 chr2 1645144 1645360 -249042494 - MIR SINE MIR -23 239 14 351 0 0 0 chr2 1645711 1645750 -249042104 + (TA)n Simple_repeat Simple_repeat 1 39 0 857 315 113 5 chr2 1645786 1646167 -249041687 - MER70B LTR ERVL -153 425 4 187 280 70 50 chr2 1647505 1647605 -249040249 + MIR SINE MIR 28 129 -133 2326 88 0 23 chr2 1647664 1647972 -249039882 + AluSx SINE Alu 1 301 -11 510 31 0 0 chr2 1648282 1648346 -249039508 + (TG)n Simple_repeat Simple_repeat 1 64 0 28 48 0 0 chr2 1648628 1648670 -249039184 + AT_rich Low_complexity Low_complexity 1 42 0 270 0 0 0 chr2 1649046 1649076 -249038778 + (TG)n Simple_repeat Simple_repeat 1 30 0 1526 171 45 48 chr2 1649210 1649520 -249038334 - AluJo SINE Alu -3 309 1 1881 221 97 34 chr2 1649665 1650250 -249037604 + MLT1E3 LTR MaLR 3 624 0 338 271 123 43 chr2 1651485 1651810 -249036044 - L1ME4a LINE L1 -106 6015 5665 2314 104 0 3 chr2 1652183 1652492 -249035362 - AluSc SINE Alu -1 308 1 399 184 0 0 chr2 1652551 1652638 -249035216 + CT-rich Low_complexity Low_complexity 4 90 0 1076 128 0 6 chr2 1652761 1652883 -249034971 + (TTC)n Simple_repeat Simple_repeat 1 300 0 1076 128 0 6 chr2 1652883 1653063 -249034791 + (TTC)n Simple_repeat Simple_repeat 1 179 0 911 171 23 27 chr2 1653275 1653484 -249034370 - L1PA8 LINE L1 -13 6142 5937 1716 154 3 43 chr2 1653484 1653783 -249034071 + Tigger4(Zombi) DNA MER2_type 1215 1501 -1230 4478 59 10 0 chr2 1653783 1654360 -249033494 - L1PA8A LINE L1 -186 5945 5363 442 200 45 18 chr2 1654790 1654900 -249032954 - LTR37B LTR ERV1 -159 309 197 449 326 20 31 chr2 1655392 1655588 -249032266 - MER63A DNA MER1_type -16 194 1 189 302 48 56 chr2 1655697 1655823 -249032031 - MER5A DNA MER1_type -35 154 30 * 235 286 0 0 chr2 1655780 1655836 -249032018 + MER5A DNA MER1_type 128 183 -6 315 71 0 0 chr2 1656299 1656341 -249031513 + (TG)n Simple_repeat Simple_repeat 2 43 0 185 35 69 0 chr2 1657579 1657608 -249030246 + A-rich Low_complexity Low_complexity 2 32 0 480 48 0 0 chr2 1658482 1658545 -249029309 + (TG)n Simple_repeat Simple_repeat 2 64 0 21 71 0 0 chr2 1659433 1659475 -249028379 + AT_rich Low_complexity Low_complexity 1 42 0 2582 27 7 3 chr2 1661257 1661558 -249026296 - AluY SINE Alu -9 302 1 32 26 0 0 chr2 1661614 1661653 -249026201 + AT_rich Low_complexity Low_complexity 1 39 0 23 54 0 0 chr2 1662193 1662230 -249025624 + AT_rich Low_complexity Low_complexity 1 37 0 1357 197 63 20 chr2 1662928 1663227 -249024627 - AluJb SINE Alu 0 312 1 285 242 34 22 chr2 1663410 1663470 -249024384 + (TA)n Simple_repeat Simple_repeat 1 59 -121 1260 149 10 0 chr2 1663470 1663678 -249024176 + MER6B DNA MER2_type 1 210 0 285 242 34 22 chr2 1663678 1663795 -249024059 + (TA)n Simple_repeat Simple_repeat 59 180 0 238 266 50 65 chr2 1663803 1663942 -249023912 - L1ME1 LINE L1 -102 6064 5928 256 331 87 29 chr2 1663944 1664116 -249023738 + L2 LINE L2 1773 1954 -1360 270 390 89 46 chr2 1664159 1664441 -249023413 + L2 LINE L2 2948 3241 -31 21 36 0 0 chr2 1665005 1665033 -249022821 + AT_rich Low_complexity Low_complexity 1 28 0 1125 230 71 43 chr2 1665868 1666289 -249021565 + MLT1D LTR MaLR 1 433 -72 184 316 51 0 chr2 1666323 1666402 -249021452 + MIR3 SINE MIR 83 165 -43 180 322 17 17 chr2 1666430 1666489 -249021365 - L2 LINE L2 -4 3309 3251 255 79 0 0 chr2 1666809 1666847 -249021007 + (TG)n Simple_repeat Simple_repeat 2 39 0 25 0 0 0 chr2 1667082 1667107 -249020747 + AT_rich Low_complexity Low_complexity 1 25 0 340 332 118 16 chr2 1667176 1667549 -249020305 + MLT1L LTR MaLR 131 541 -74 1084 269 274 18 chr2 1668029 1668851 -249019003 - L1MC4 LINE L1 -205 7837 6806 378 230 18 9 chr2 1668856 1668969 -249018885 - L1MA4 LINE L1 -209 6091 5978 * 655 249 54 80 chr2 1668961 1669334 -249018520 - L1MC4 LINE L1 -1222 6820 6458 203 286 22 0 chr2 1670219 1670310 -249017544 + (TG)n Simple_repeat Simple_repeat 1 93 0 1001 127 0 6 chr2 1670511 1670573 -249017281 + (GGA)n Simple_repeat Simple_repeat 1 241 0 1001 127 0 6 chr2 1670573 1670754 -249017100 + (GGA)n Simple_repeat Simple_repeat 1 180 0 211 339 97 0 chr2 1671520 1671644 -249016210 - L2 LINE L2 -9 3304 3169 260 26 128 0 chr2 1671765 1671843 -249016011 + (TA)n Simple_repeat Simple_repeat 1 88 0 200 132 0 26 chr2 1672213 1672251 -249015603 + (CAAAAA)n Simple_repeat Simple_repeat 5 41 0 1873 166 27 48 chr2 1673227 1673787 -249014067 - MLT2A2 LTR ERVL 0 554 1 219 263 100 25 chr2 1673866 1673946 -249013908 - MIR SINE MIR -73 189 104 1462 196 85 24 chr2 1674278 1674619 -249013235 + MLT1A1 LTR MaLR 4 365 0 25 51 0 0 chr2 1675150 1675189 -249012665 + AT_rich Low_complexity Low_complexity 1 39 0 210 319 69 0 chr2 1675868 1675940 -249011914 + L2 LINE L2 2413 2489 -825 241 333 32 51 chr2 1676517 1676673 -249011181 + L2 LINE L2 2686 2838 -476 2220 133 30 25 chr2 1676907 1677269 -249010585 + THE1B LTR MaLR 1 364 0 259 355 44 24 chr2 1678608 1678827 -249009027 - MIR SINE MIR -26 236 17 1749 189 97 8 chr2 1678874 1679265 -249008589 - MSTA LTR MaLR 0 428 3 6613 203 107 15 chr2 1679267 1680779 -249007075 - MSTB-int LTR MaLR 0 1651 1 1949 194 65 5 chr2 1680779 1681181 -249006673 - MSTB LTR MaLR 0 426 1 1033 260 97 26 chr2 1681230 1681727 -249006127 - LTR10B LTR ERV1 0 547 16 2806 98 51 5 chr2 1682263 1682691 -249005163 + MLT2A2 LTR ERVL 1 448 -5 10254 109 4 12 chr2 1682694 1683063 -249004791 + THE1B-int LTR MaLR 5 375 -1205 1804 136 0 0 chr2 1683063 1683314 -249004540 - AluSc SINE Alu -9 300 50 10254 109 4 12 chr2 1683314 1684471 -249003383 + THE1B-int LTR MaLR 375 1519 -61 3097 99 18 14 chr2 1684472 1684914 -249002940 - MLT2A1 LTR ERVL 0 444 1 40172 87 10 2 chr2 1684915 1685348 -249002506 - HERVL-A1 LTR ERVL -1 5653 5225 236 53 26 0 chr2 1685348 1685386 -249002468 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 40172 87 10 2 chr2 1685386 1690562 -248997292 - HERVL-A1 LTR ERVL -429 5225 1 3095 101 9 11 chr2 1690562 1691007 -248996847 - MLT2A1 LTR ERVL 0 444 1 448 77 0 0 chr2 1691007 1691072 -248996782 + THE1B-int LTR MaLR 1516 1580 0 2088 132 51 28 chr2 1691072 1691428 -248996426 + THE1B LTR MaLR 1 364 0 255 287 77 56 chr2 1692355 1692498 -248995356 + MIR SINE MIR 117 262 0 24 67 0 0 chr2 1694090 1694135 -248993719 + AT_rich Low_complexity Low_complexity 1 45 0 22 0 0 0 chr2 1694417 1694439 -248993415 + AT_rich Low_complexity Low_complexity 1 22 0 578 272 110 0 chr2 1694762 1695016 -248992838 - L1M4 LINE L1 -2804 3342 3061 228 306 52 31 chr2 1695072 1695265 -248992589 - L1M4 LINE L1 -3715 2431 2235 3624 185 13 46 chr2 1695287 1696185 -248991669 - L1MB3 LINE L1 -2 6181 5313 * 3664 218 63 46 chr2 1696184 1697296 -248990558 - L1MC3 LINE L1 -743 5403 5096 1869 179 0 10 chr2 1697296 1697609 -248990245 + AluJb SINE Alu 3 312 0 3664 218 63 46 chr2 1697609 1698411 -248989443 - L1MC3 LINE L1 -1050 5096 4309 1291 232 57 21 chr2 1698423 1698897 -248988957 - L1MC3 LINE L1 -2042 4104 3614 2207 85 4 0 chr2 1699003 1699329 -248988525 + AluY SINE Alu 1 327 0 376 309 49 19 chr2 1699337 1699499 -248988355 + MER5B DNA MER1_type 1 167 -11 2158 176 39 28 chr2 1701683 1702143 -248985711 + MLT1C LTR MaLR 1 465 -2 2345 244 64 26 chr2 1702359 1703228 -248984626 + L1ME2 LINE L1 5254 6155 -9 323 256 57 81 chr2 1703257 1703468 -248984386 + L1MC4 LINE L1 7829 8034 -8 491 231 144 5 chr2 1704339 1704534 -248983320 - L1MA9 LINE L1 -38 6274 6053 234 310 0 0 chr2 1705978 1706049 -248981805 + MLT1J LTR MaLR 229 299 -212 238 234 85 0 chr2 1706974 1707068 -248980786 + LTR33A LTR ERVL 408 509 -14 272 356 34 0 chr2 1708865 1708983 -248978871 + MIR SINE MIR 138 259 -3 1975 121 32 0 chr2 1709018 1709299 -248978555 - AluSc SINE Alu -4 305 16 250 340 19 19 chr2 1710669 1710775 -248977079 - MIR3 SINE MIR -88 120 15 259 364 93 0 chr2 1711030 1711170 -248976684 + MIR SINE MIR 108 260 -2 529 363 28 4 chr2 1711187 1711438 -248976416 - MIR SINE MIR 0 262 6 1526 273 99 56 chr2 1711902 1712761 -248975093 + L2 LINE L2 2153 3036 -277 1419 172 23 15 chr2 1712776 1713038 -248974816 - AluJb SINE Alu -48 264 1 628 238 166 14 chr2 1713242 1713465 -248974389 + MER69 DNA AcHobo 275 531 -695 543 265 99 7 chr2 1713575 1713726 -248974128 - MIR SINE MIR -89 173 9 296 291 72 11 chr2 1713818 1713978 -248973876 - MIR SINE MIR -63 199 32 243 133 0 0 chr2 1714893 1714938 -248972916 + (CAT)n Simple_repeat Simple_repeat 3 47 0 303 330 61 0 chr2 1717892 1718007 -248969847 - L2 LINE L2 -9 3263 3142 1634 136 42 33 chr2 1718918 1719440 -248968414 + MER50 LTR ERV1 1 729 -5 254 255 49 39 chr2 1721654 1721756 -248966098 - MIR SINE MIR -56 206 104 2117 174 58 7 chr2 1721831 1722278 -248965576 + L1MC2 LINE L1 5850 6319 -25 26 50 0 0 chr2 1722616 1722656 -248965198 + AT_rich Low_complexity Low_complexity 1 40 0 479 307 131 27 chr2 1723451 1723862 -248963992 + L1MCc LINE L1 799 1252 -5171 402 174 35 0 chr2 1723886 1723972 -248963882 + L1MCc LINE L1 2318 2657 -4285 986 273 96 25 chr2 1723977 1724933 -248962921 + L1ME1 LINE L1 1729 2697 -3518 565 241 12 48 chr2 1724933 1725099 -248962755 - FRAM SINE Alu -6 160 1 994 241 113 12 chr2 1725100 1725597 -248962257 + L1ME1 LINE L1 2916 3462 -2753 849 262 53 37 chr2 1725627 1726058 -248961796 + L1ME1 LINE L1 4143 4580 -1635 935 260 138 28 chr2 1726112 1726637 -248961217 + L1ME1 LINE L1 5327 5895 -340 237 33 0 0 chr2 1726652 1726682 -248961172 + (TA)n Simple_repeat Simple_repeat 2 31 0 530 269 54 16 chr2 1726836 1727022 -248960832 + L1ME1 LINE L1 5989 6181 -54 2291 105 3 0 chr2 1727075 1727381 -248960473 - AluSq SINE Alu -6 307 1 446 186 0 10 chr2 1728425 1728522 -248959332 + GA-rich Low_complexity Low_complexity 2 97 0 1460 196 49 63 chr2 1730538 1730966 -248956888 - L1MA8 LINE L1 -93 6198 5777 248 155 103 38 chr2 1730938 1731018 -248956836 + L1MA8 LINE L1 6207 6291 0 * 24 0 0 0 chr2 1731021 1731045 -248956809 + AT_rich Low_complexity Low_complexity 1 24 0 207 228 0 51 chr2 1731629 1731708 -248956146 + T-rich Low_complexity Low_complexity 1 75 0 225 213 0 0 chr2 1732375 1732422 -248955432 + LTR67 LTR ERVL 509 555 -2 252 0 0 0 chr2 1732794 1732822 -248955032 + (TG)n Simple_repeat Simple_repeat 1 28 0 514 268 205 0 chr2 1734102 1734307 -248953547 - MIR SINE MIR -1 261 15 560 313 131 55 chr2 1734380 1734799 -248953055 - MLT1K LTR MaLR -135 453 3 190 327 0 0 chr2 1736027 1736082 -248951772 - MIR SINE MIR -14 248 194 2198 201 13 19 chr2 1736295 1736763 -248951091 + MLT1C LTR MaLR 1 465 -2 22 0 0 0 chr2 1738733 1738755 -248949099 + AT_rich Low_complexity Low_complexity 1 22 0 560 267 56 0 chr2 1739520 1739681 -248948173 + MLT-int LTR MaLR 596 765 -970 258 215 0 0 chr2 1739727 1739792 -248948062 + MER89 LTR ERV1 30 94 -465 279 160 20 0 chr2 1739869 1739919 -248947935 - MER34 LTR ERV1 -491 51 1 252 259 62 36 chr2 1740436 1740548 -248947306 + MER117 DNA MER1_type 3 117 -80 295 322 82 14 chr2 1741399 1741691 -248946163 + L1MC3 LINE L1 3681 3992 -2154 277 257 18 9 chr2 1741715 1741828 -248946026 + (TA)n Simple_repeat Simple_repeat 1 114 0 455 264 96 44 chr2 1741869 1742119 -248945735 + L1MC3 LINE L1 4062 4324 -1822 1441 194 26 23 chr2 1742133 1742437 -248945417 - MLT1A1 LTR MaLR -7 358 54 245 263 18 0 chr2 1742437 1742494 -248945360 - MST-int LTR MaLR -540 1111 1054 2261 251 44 18 chr2 1742509 1743126 -248944728 - MLT1A1-int LTR MaLR -970 765 133 1392 143 20 29 chr2 1743126 1743295 -248944559 - MSTA LTR MaLR 0 428 260 2275 145 3 6 chr2 1743295 1743660 -248944194 + THE1B LTR MaLR 1 364 0 1392 143 20 29 chr2 1743660 1743734 -248944120 - MSTA LTR MaLR -168 260 187 886 152 20 51 chr2 1743794 1743991 -248943863 - MSTA LTR MaLR -237 191 1 765 160 15 0 chr2 1743995 1744126 -248943728 - MLT1A1-int LTR MaLR -1602 133 1 1772 174 32 12 chr2 1744127 1744467 -248943387 - MLT1A1 LTR MaLR 0 365 19 1637 210 38 0 chr2 1744942 1745289 -248942565 - MLT1A1 LTR MaLR -2 363 4 265 318 46 23 chr2 1745302 1745519 -248942335 + L1MC3 LINE L1 4379 4600 -1546 1183 261 57 46 chr2 1745674 1746362 -248941492 + L1MC3 LINE L1 5467 6146 -1664 186 43 0 0 chr2 1746362 1746385 -248941469 + (CATA)n Simple_repeat Simple_repeat 2 24 0 1183 261 57 46 chr2 1746385 1747426 -248940428 + L1MC3 LINE L1 6146 7174 -636 1804 138 4 8 chr2 1747426 1747686 -248940168 + AluSq SINE Alu 1 259 -54 1183 261 57 46 chr2 1747686 1747699 -248940155 + L1MC3 LINE L1 7174 7185 -625 222 37 0 0 chr2 1747699 1747726 -248940128 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1183 261 57 46 chr2 1747726 1748381 -248939473 + L1MC3 LINE L1 7185 7800 -10 290 154 66 55 chr2 1748579 1748670 -248939184 + L1ME3A LINE L1 6071 6162 -8 1784 178 3 0 chr2 1748682 1748975 -248938879 + AluJb SINE Alu 3 296 -16 5143 40 11 2 chr2 1749355 1749985 -248937869 - L1PA5 LINE L1 -4 6150 5515 365 239 0 22 chr2 1750130 1750222 -248937632 + L1MC4 LINE L1 6614 6703 -1339 382 102 87 0 chr2 1750225 1750352 -248937502 + (TA)n Simple_repeat Simple_repeat 1 138 0 1496 70 4 48 chr2 1750528 1750539 -248937315 - L1PA11 LINE L1 0 6174 6164 2234 92 0 22 chr2 1750539 1750854 -248937000 - AluSp SINE Alu -2 311 4 1496 70 4 48 chr2 1750854 1751072 -248936782 - L1PA11 LINE L1 -10 6164 5955 587 153 38 0 chr2 1751661 1751780 -248936074 - MLT1D LTR MaLR 0 505 396 318 26 0 0 chr2 1752606 1752645 -248935209 + (CA)n Simple_repeat Simple_repeat 2 40 0 273 330 21 0 chr2 1752718 1752812 -248935042 + L3 LINE CR1 790 885 -692 21 0 0 0 chr2 1753764 1753785 -248934069 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 1755088 1755113 -248932741 + AT_rich Low_complexity Low_complexity 1 25 0 252 0 0 0 chr2 1755382 1755410 -248932444 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 249 180 0 0 chr2 1755787 1755837 -248932017 + GA-rich Low_complexity Low_complexity 3 52 0 25 0 0 0 chr2 1756136 1756161 -248931693 + AT_rich Low_complexity Low_complexity 1 25 0 198 297 103 32 chr2 1757156 1757311 -248930543 + MIR SINE MIR 47 212 -50 234 0 0 0 chr2 1758775 1758801 -248929053 + (TG)n Simple_repeat Simple_repeat 1 26 0 251 263 13 40 chr2 1758807 1758883 -248928971 - MIR SINE MIR -115 147 74 443 296 100 71 chr2 1758933 1759213 -248928641 - L2 LINE L2 0 3313 3026 1387 253 31 14 chr2 1759563 1759986 -248927868 + MER63B DNA MER1_type 7 436 0 1508 43 5 0 chr2 1762358 1762546 -248925308 - AluY SINE Alu -4 307 119 29 0 0 0 chr2 1762656 1762685 -248925169 + AT_rich Low_complexity Low_complexity 1 29 0 26 74 0 0 chr2 1763241 1763295 -248924559 + AT_rich Low_complexity Low_complexity 1 54 0 21 36 0 0 chr2 1763317 1763345 -248924509 + AT_rich Low_complexity Low_complexity 1 28 0 191 402 12 12 chr2 1763437 1763519 -248924335 - MIR SINE MIR -161 101 20 3211 210 94 25 chr2 1763649 1764435 -248923419 - MER21B LTR ERV1 -11 852 13 193 320 154 0 chr2 1764439 1764517 -248923337 + L2 LINE L2 3164 3253 -19 3497 111 83 12 chr2 1764776 1765369 -248922485 - LTR24C LTR ERV1 0 635 1 5036 126 29 21 chr2 1765637 1766500 -248921354 - MER4D LTR ERV1 -2 870 1 2574 58 0 0 chr2 1766534 1766845 -248921009 + AluY SINE Alu 1 311 0 1404 277 25 11 chr2 1766911 1767355 -248920499 + Charlie1a DNA MER1_type 1 450 -1005 450 286 19 33 chr2 1767355 1767565 -248920289 + L1ME LINE L1 4574 4780 -1366 2904 143 24 24 chr2 1767597 1767717 -248920137 - MLT2A1 LTR ERVL 0 515 396 279 0 0 0 chr2 1767717 1767748 -248920106 + (TA)n Simple_repeat Simple_repeat 1 31 0 2904 143 24 24 chr2 1767748 1768134 -248919720 - MLT2A1 LTR ERVL -119 396 1 922 249 46 92 chr2 1768138 1768487 -248919367 - MLT1A2 LTR MaLR -21 353 21 904 178 51 0 chr2 1768505 1768662 -248919192 - MER72 LTR ERV1 -557 165 1 373 345 65 50 chr2 1768662 1768984 -248918870 + L1ME LINE L1 4966 5292 -854 240 254 17 0 chr2 1769041 1769100 -248918754 + GA-rich Low_complexity Low_complexity 1 60 0 297 341 75 26 chr2 1769139 1769523 -248918331 + L1ME LINE L1 5457 5859 -311 340 104 0 0 chr2 1769626 1769674 -248918180 - AluY SINE Alu -219 82 35 764 189 7 0 chr2 1769697 1769848 -248918006 - MLT1A2 LTR MaLR 0 390 237 182 387 32 8 chr2 1769962 1770086 -248917768 + MIR3 SINE MIR 14 140 -68 29 28 0 0 chr2 1770668 1770704 -248917150 + AT_rich Low_complexity Low_complexity 1 36 0 183 80 0 0 chr2 1770985 1771010 -248916844 + (TTTTG)n Simple_repeat Simple_repeat 5 29 0 363 271 66 36 chr2 1771031 1771197 -248916657 - L1ME LINE L1 -382 5739 5569 208 287 278 9 chr2 1771276 1771391 -248916463 + MER5A DNA MER1_type 44 189 0 346 303 10 0 chr2 1772079 1772178 -248915676 - MER5A DNA MER1_type -80 109 10 234 281 70 126 chr2 1772344 1772543 -248915311 + MIR SINE MIR 3 190 -72 2023 138 7 0 chr2 1774032 1774330 -248913524 + AluSx SINE Alu 2 301 -11 1870 118 47 4 chr2 1774808 1775087 -248912767 + AluSx SINE Alu 1 291 -21 464 254 114 55 chr2 1775104 1775162 -248912692 - MIR SINE MIR -2 260 207 252 86 0 0 chr2 1775162 1775197 -248912657 + (CA)n Simple_repeat Simple_repeat 2 36 0 464 254 114 55 chr2 1775197 1775374 -248912480 - MIR SINE MIR -55 207 11 28 0 0 0 chr2 1776512 1776540 -248911314 + AT_rich Low_complexity Low_complexity 1 28 0 185 298 48 0 chr2 1776696 1776780 -248911074 - L2 LINE L2 -2882 432 345 2272 256 44 50 chr2 1777381 1778039 -248909815 - L1MD3 LINE L1 -13 8400 7769 2812 6 0 10 chr2 1778039 1778352 -248909502 + AluY SINE Alu 1 310 -1 2272 256 44 50 chr2 1778352 1778540 -248909314 - L1MD3 LINE L1 -644 7769 7581 3351 138 27 0 chr2 1778543 1779265 -248908589 + L1P5 LINE L1 5053 5791 -360 219 114 0 0 chr2 1779271 1779306 -248908548 + (TA)n Simple_repeat Simple_repeat 2 36 0 263 104 0 21 chr2 1779309 1779357 -248908497 + L1P5 LINE L1 5784 5830 -321 2510 115 0 0 chr2 1779506 1779870 -248907984 + L1PB1 LINE L1 5788 6151 0 4379 248 75 43 chr2 1779877 1780002 -248907852 - L1MD3 LINE L1 -757 5807 5687 1382 213 10 30 chr2 1780002 1780298 -248907556 - AluJb SINE Alu -22 290 1 4379 248 75 43 chr2 1780298 1781601 -248906253 - L1MD3 LINE L1 -877 5687 6055 966 8 24 0 chr2 1781601 1781724 -248906130 + (TCTA)n Simple_repeat Simple_repeat 3 128 0 4379 248 75 43 chr2 1781724 1782451 -248905403 - L1MD3 LINE L1 -508 6056 5354 288 214 0 0 chr2 1782451 1782507 -248905347 - L1 LINE L1 -1329 5235 5180 25 31 0 0 chr2 1782523 1782555 -248905299 + AT_rich Low_complexity Low_complexity 1 32 0 6470 141 9 9 chr2 1782559 1783997 -248903857 - L1MA3 LINE L1 -1 7723 6287 * 9724 181 23 13 chr2 1783989 1785704 -248902150 - L1MA3 LINE L1 -5821 1744 13 4693 234 39 6 chr2 1785711 1786980 -248900874 - L1 LINE L1 -1364 6201 4892 285 200 0 17 chr2 1786978 1787038 -248900816 - L1M4c LINE L1 -6320 64 6 * 1405 291 43 33 chr2 1787023 1787833 -248900021 - L1MD3 LINE L1 -2181 4383 3566 238 125 18 36 chr2 1788469 1788525 -248899329 - L1MCc LINE L1 -6105 318 264 340 283 25 69 chr2 1788565 1788724 -248899130 - L1MD3 LINE L1 -5889 156 5 10287 90 5 16 chr2 1788969 1790745 -248897109 + L1P3 LINE L1 3875 5643 -511 298 38 0 113 chr2 1790744 1790797 -248897057 + L1PA7 LINE L1 6108 6154 0 * 391 244 41 32 chr2 1791861 1791984 -248895870 + MER5B DNA MER1_type 1 124 -54 375 23 0 0 chr2 1792109 1792153 -248895701 + (TG)n Simple_repeat Simple_repeat 1 44 0 1242 233 66 3 chr2 1792710 1793015 -248894839 + MLT1A1 LTR MaLR 1 324 -41 222 383 28 0 chr2 1793044 1793151 -248894703 + MIR SINE MIR 34 143 -65 202 307 93 21 chr2 1793346 1793486 -248894368 + L2 LINE L2 2671 2820 -494 355 333 32 43 chr2 1793532 1793718 -248894136 + MIR SINE MIR 8 191 -71 3073 223 55 43 chr2 1794199 1794889 -248892965 - L1MB5 LINE L1 -8 6166 5486 940 227 44 86 chr2 1794889 1795298 -248892556 - MSTD LTR MaLR 0 396 5 3073 223 55 43 chr2 1795298 1796305 -248891549 - L1MB5 LINE L1 -688 5486 4442 322 344 56 8 chr2 1798118 1798243 -248889611 + L2 LINE L2 3142 3272 0 312 262 76 81 chr2 1798315 1798525 -248889329 + L2 LINE L2 3101 3309 -4 453 293 6 17 chr2 1799684 1799865 -248887989 + C-rich Low_complexity Low_complexity 2 180 0 403 80 0 0 chr2 1800029 1800079 -248887775 - MER51B LTR ERV1 0 377 328 876 224 9 39 chr2 1800082 1800314 -248887540 - L1ME LINE L1 -370 6294 6070 523 272 76 31 chr2 1800320 1800544 -248887310 - MER2 DNA MER2_type -8 337 104 292 93 0 0 chr2 1800574 1800617 -248887237 + MADE1 DNA Mariner 38 80 0 486 217 47 9 chr2 1800626 1800732 -248887122 - MER2 DNA MER2_type -234 111 2 402 158 40 59 chr2 1800735 1800836 -248887018 - L1ME LINE L1 -610 6072 5974 725 141 0 8 chr2 1800836 1800964 -248886890 + (TTCC)n Simple_repeat Simple_repeat 3 129 0 3069 267 40 62 chr2 1800974 1802925 -248884929 - L1ME LINE L1 -743 5901 4067 607 291 36 40 chr2 1803009 1803484 -248884370 - L1ME LINE L1 -5195 1347 875 180 0 0 0 chr2 1803488 1803508 -248884346 + (TG)n Simple_repeat Simple_repeat 2 21 0 1923 178 15 3 chr2 1803508 1803850 -248884004 - MER7A DNA MER2_type -1 345 2 303 340 118 30 chr2 1803917 1804246 -248883608 - L1ME LINE L1 -5667 875 518 267 269 15 60 chr2 1804439 1804573 -248883281 - L1ME LINE L1 -6316 226 99 12859 160 43 11 chr2 1804827 1807171 -248880683 + Tigger1 DNA MER2_type 1 2418 0 284 326 11 42 chr2 1809061 1809201 -248878653 + MIR SINE MIR 2 139 -69 188 238 63 32 chr2 1809573 1809636 -248878218 + L3 LINE CR1 1479 1543 -34 246 280 140 11 chr2 1809661 1809754 -248878100 + L2 LINE L2 3199 3303 -10 457 139 40 0 chr2 1809984 1810085 -248877769 + (TATG)n Simple_repeat Simple_repeat 2 106 0 22 0 0 0 chr2 1810353 1810375 -248877479 + AT_rich Low_complexity Low_complexity 1 22 0 186 43 0 0 chr2 1811054 1811077 -248876777 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1919 176 3 0 chr2 1811715 1812017 -248875837 - AluJb SINE Alu -9 303 1 873 103 5 43 chr2 1812454 1812639 -248875215 + (GGAA)n Simple_repeat Simple_repeat 2 179 0 2328 97 0 3 chr2 1814364 1814673 -248873181 - AluSc SINE Alu -1 308 1 207 88 0 0 chr2 1814982 1815016 -248872838 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 233 254 0 0 chr2 1816178 1816237 -248871617 + MLT1K LTR MaLR 530 588 0 392 118 65 30 chr2 1816736 1816905 -248870949 + (TA)n Simple_repeat Simple_repeat 1 175 0 236 201 25 19 chr2 1816908 1817067 -248870787 + (TTATA)n Simple_repeat Simple_repeat 5 164 0 3276 55 19 3 chr2 1817175 1817720 -248870134 - L1P2 LINE L1 -431 5723 5171 1333 203 103 29 chr2 1818599 1818939 -248868915 - MLT1A1 LTR MaLR 0 365 1 349 212 0 50 chr2 1819218 1819316 -248868538 - MIR SINE MIR -64 144 68 591 183 25 0 chr2 1819683 1819803 -248868051 + MER58B DNA MER1_type 219 341 0 245 321 119 8 chr2 1821346 1821480 -248866374 + L2 LINE L2 3164 3312 -1 22 0 0 0 chr2 1821489 1821511 -248866343 + AT_rich Low_complexity Low_complexity 1 22 0 2501 68 0 3 chr2 1821952 1822262 -248865592 - AluY SINE Alu -2 309 1 4168 29 0 0 chr2 1822490 1822979 -248864875 + L1PA4 LINE L1 5664 6152 -3 1804 223 10 83 chr2 1823175 1823762 -248864092 + MER52A LTR ERV1 1207 1750 -5 1438 247 5 27 chr2 1823767 1824136 -248863718 + MLT1A1 LTR MaLR 3 363 -2 428 239 0 0 chr2 1824917 1825009 -248862845 - MIR3 SINE MIR -14 194 103 353 376 65 0 chr2 1826103 1826273 -248861581 + MIR SINE MIR 9 189 -73 299 65 22 0 chr2 1826614 1826660 -248861194 + (TC)n Simple_repeat Simple_repeat 2 48 0 327 136 0 0 chr2 1826696 1826755 -248861099 + (TGGA)n Simple_repeat Simple_repeat 3 61 0 418 231 115 13 chr2 1827302 1827458 -248860396 - MLT1K LTR MaLR -32 556 385 1090 215 88 61 chr2 1827678 1827711 -248860143 - MLT2D LTR ERVL -6 408 377 297 0 0 0 chr2 1827711 1827744 -248860110 + (TG)n Simple_repeat Simple_repeat 1 33 0 1090 215 88 61 chr2 1827744 1827755 -248860099 - MLT2D LTR ERVL -37 377 368 186 43 0 0 chr2 1827755 1827778 -248860076 + (GA)n Simple_repeat Simple_repeat 2 24 0 1090 215 88 61 chr2 1827778 1828053 -248859801 - MLT2D LTR ERVL -46 368 72 1808 144 28 0 chr2 1828053 1828337 -248859517 - AluSg SINE Alu -12 298 7 1090 215 88 61 chr2 1828337 1828411 -248859443 - MLT2D LTR ERVL -342 72 2 207 139 0 0 chr2 1828523 1828559 -248859295 + (CA)n Simple_repeat Simple_repeat 2 37 0 221 237 0 13 chr2 1829205 1829281 -248858573 + GA-rich Low_complexity Low_complexity 3 77 0 233 272 224 8 chr2 1829646 1829771 -248858083 - MIR SINE MIR -11 251 100 396 0 0 0 chr2 1830188 1830232 -248857622 + (CA)n Simple_repeat Simple_repeat 2 45 0 246 136 0 0 chr2 1830847 1830891 -248856963 + (TG)n Simple_repeat Simple_repeat 1 44 0 226 250 190 40 chr2 1831743 1831843 -248856011 + L2 LINE L2 3158 3272 0 2038 127 3 0 chr2 1832059 1832363 -248855491 + AluSx SINE Alu 1 305 0 243 264 77 0 chr2 1832468 1832559 -248855295 + L1ME LINE L1 86 183 -5887 1790 262 90 43 chr2 1832696 1833784 -248854070 + L1M4 LINE L1 3696 4834 -1312 908 249 49 42 chr2 1833797 1834115 -248853739 + L1ME LINE L1 3975 4298 -1782 2612 46 0 0 chr2 1834115 1834417 -248853437 - AluY SINE Alu -9 302 1 908 249 49 42 chr2 1834417 1834527 -248853327 + L1ME LINE L1 4298 4406 -1674 337 265 90 11 chr2 1834511 1834779 -248853075 + L1ME LINE L1 4957 5245 -835 * 555 271 16 0 chr2 1834853 1835102 -248852752 + L1ME LINE L1 5259 5605 -450 1749 178 35 22 chr2 1835408 1835778 -248852076 - THE1C LTR MaLR 0 375 1 315 349 84 21 chr2 1835933 1836171 -248851683 - MIR SINE MIR -9 253 1 245 345 12 0 chr2 1836308 1836392 -248851462 - L3 LINE CR1 -346 1231 1147 24 0 0 0 chr2 1837443 1837467 -248850387 + AT_rich Low_complexity Low_complexity 1 24 0 187 240 20 20 chr2 1837806 1837856 -248849998 - MIR SINE MIR -63 199 150 6313 93 12 1 chr2 1838667 1839648 -248848206 + L1PA8 LINE L1 5175 6165 -7 240 301 108 0 chr2 1839765 1839858 -248847996 - MIR SINE MIR -35 227 125 199 317 131 7 chr2 1840086 1840231 -248847623 - MIR SINE MIR -37 225 63 33 0 0 0 chr2 1840981 1841014 -248846840 + AT_rich Low_complexity Low_complexity 1 33 0 390 42 0 0 chr2 1843998 1844046 -248843808 + (CAATT)n Simple_repeat Simple_repeat 2 49 0 40462 34 27 1 chr2 1844383 1850378 -248837476 + L1PA2 LINE L1 1 6154 -1 2187 139 0 0 chr2 1852473 1852774 -248835080 - AluSx SINE Alu -9 303 3 246 242 180 31 chr2 1853851 1853979 -248833875 - MIR SINE MIR 0 262 116 336 48 0 0 chr2 1854702 1854744 -248833110 + (TG)n Simple_repeat Simple_repeat 2 43 0 274 292 43 31 chr2 1857269 1857430 -248830424 - L1ME LINE L1 -312 5858 5696 227 272 124 50 chr2 1857436 1857638 -248830216 - LTR41 LTR ERVL -15 758 542 268 259 28 85 chr2 1857818 1858030 -248829824 - LTR41 LTR ERVL -573 200 1 307 303 18 9 chr2 1858073 1858182 -248829672 - L1ME LINE L1 -513 5651 5542 301 280 30 0 chr2 1858184 1858316 -248829538 - L1ME LINE L1 -708 5454 5319 596 254 154 50 chr2 1858351 1859125 -248828729 - L1ME LINE L1 -816 5330 4477 910 293 99 3 chr2 1859284 1859636 -248828218 + LTR53 LTR ERVL 1 386 -133 1304 204 17 3 chr2 1859647 1859941 -248827913 - L1P LINE L1 -964 5182 4885 180 26 53 26 chr2 1859947 1859985 -248827869 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1468 186 21 77 chr2 1860226 1860656 -248827198 + LTR52 LTR ERVL 13 418 -3 681 254 115 21 chr2 1860660 1860991 -248826863 - L1M4 LINE L1 -551 5633 5272 * 1081 222 50 81 chr2 1860972 1861372 -248826482 - L1M4 LINE L1 -789 5357 4973 1888 191 5 0 chr2 1861372 1861750 -248826104 - L1MB2 LINE L1 -2 6169 5790 1081 222 50 81 chr2 1861750 1861844 -248826010 - L1M4 LINE L1 -1173 4973 4878 350 273 7 56 chr2 1863061 1863204 -248824650 - L2 LINE L2 -203 3069 2934 225 397 94 21 chr2 1863247 1863481 -248824373 - L2 LINE L2 -459 2855 2605 227 287 66 37 chr2 1864116 1864252 -248823602 + MIR SINE MIR 122 261 -1 219 232 0 0 chr2 1864742 1864798 -248823056 + (TTCA)n Simple_repeat Simple_repeat 1 56 0 1983 153 0 0 chr2 1865508 1865803 -248822051 - AluSx SINE Alu -15 297 3 380 273 105 14 chr2 1866931 1867074 -248820780 - L2 LINE L2 0 3313 3158 198 0 0 0 chr2 1867179 1867201 -248820653 + (TG)n Simple_repeat Simple_repeat 1 22 0 784 297 20 28 chr2 1867324 1867573 -248820281 - MIR SINE MIR -4 258 12 223 337 18 49 chr2 1868139 1868302 -248819552 + L2 LINE L2 2933 3090 -182 202 140 20 20 chr2 1868931 1868981 -248818873 + (TA)n Simple_repeat Simple_repeat 2 51 0 353 281 50 50 chr2 1868993 1869192 -248818662 - L1ME LINE L1 -360 5761 5563 22 88 0 0 chr2 1871567 1871624 -248816230 + AT_rich Low_complexity Low_complexity 1 57 0 330 253 53 67 chr2 1872375 1872676 -248815178 + L1MDa LINE L1 1324 1660 -5061 270 0 0 0 chr2 1872729 1872759 -248815095 + (CA)n Simple_repeat Simple_repeat 2 31 0 457 312 80 0 chr2 1873657 1873907 -248813947 + L1M4 LINE L1 1344 1613 -5246 889 247 91 51 chr2 1873930 1874359 -248813495 + L1M4 LINE L1 5633 6078 -879 821 205 12 89 chr2 1874382 1874640 -248813214 - LTR12 LTR ERV1 -239 475 238 7972 184 68 30 chr2 1875451 1877142 -248810712 + MER52A LTR ERV1 1 1755 0 207 200 0 0 chr2 1878164 1878204 -248809650 + MIR SINE MIR 185 224 -38 261 75 0 0 chr2 1878205 1878245 -248809609 + (GA)n Simple_repeat Simple_repeat 2 41 0 2325 100 3 0 chr2 1878421 1878721 -248809133 - AluSq SINE Alu -12 301 1 1755 211 0 0 chr2 1878951 1879302 -248808552 + L1P LINE L1 4410 4760 -1386 871 178 77 6 chr2 1879307 1879476 -248808378 - MLT1B LTR MaLR -202 188 8 275 274 264 0 chr2 1879566 1879672 -248808182 + L2 LINE L2 3180 3313 0 253 226 39 29 chr2 1880658 1880760 -248807094 + (CA)n Simple_repeat Simple_repeat 2 104 0 292 207 33 20 chr2 1880772 1880922 -248806932 + (CA)n Simple_repeat Simple_repeat 1 152 0 342 312 11 58 chr2 1880976 1881165 -248806689 + (CACG)n Simple_repeat Simple_repeat 1 180 0 * 442 261 6 30 chr2 1881045 1881210 -248806644 + (CA)n Simple_repeat Simple_repeat 1 161 0 319 333 0 0 chr2 1882615 1882723 -248805131 - MIR3 SINE MIR -8 200 93 235 185 15 31 chr2 1882872 1882937 -248804917 - MLT1E1 LTR MaLR -440 214 151 506 71 12 60 chr2 1882946 1883030 -248804824 - MADE1 DNA Mariner 0 80 1 378 61 0 0 chr2 1883148 1883197 -248804657 + (CA)n Simple_repeat Simple_repeat 2 50 0 403 333 15 0 chr2 1883569 1883701 -248804153 + L2 LINE L2 3136 3269 -3 584 327 118 34 chr2 1883842 1884208 -248803646 - L1MEc LINE L1 -4212 2184 1759 2242 92 0 0 chr2 1884208 1884492 -248803362 - AluSx SINE Alu -28 284 1 584 327 118 34 chr2 1884492 1884651 -248803203 - L1MEc LINE L1 -4637 1759 1615 196 393 25 16 chr2 1884924 1885046 -248802808 + MIR SINE MIR 76 198 -64 21 0 0 0 chr2 1886181 1886202 -248801652 + AT_rich Low_complexity Low_complexity 1 21 0 702 222 28 113 chr2 1886289 1886609 -248801245 + MLT1C LTR MaLR 34 326 -141 348 297 135 15 chr2 1886875 1887141 -248800713 - HAL1b LINE L1 -21 1327 1030 391 276 173 28 chr2 1887166 1887420 -248800434 - HAL1b LINE L1 -523 825 535 475 254 56 0 chr2 1887488 1887630 -248800224 - HAL1b LINE L1 -717 631 482 254 329 0 0 chr2 1887736 1887812 -248800042 + CT-rich Low_complexity Low_complexity 3 78 0 1347 238 16 53 chr2 1888041 1888378 -248799476 + MLT2D LTR ERVL 50 373 -41 330 26 0 0 chr2 1888378 1888417 -248799437 + (CA)n Simple_repeat Simple_repeat 2 40 0 1347 238 16 53 chr2 1888417 1888458 -248799396 + MLT2D LTR ERVL 373 414 0 272 325 40 32 chr2 1889964 1890090 -248797764 + MIR SINE MIR 100 226 -36 1696 200 74 32 chr2 1890108 1890488 -248797366 - MSTD LTR MaLR 0 396 1 1795 186 61 0 chr2 1890493 1890853 -248797001 + MSTC LTR MaLR 4 385 -43 1882 224 41 5 chr2 1890853 1891264 -248796590 - MSTB LTR MaLR 0 426 1 2284 199 68 11 chr2 1891272 1891744 -248796110 - MSTB-int LTR MaLR -15 1636 1138 11254 25 0 6 chr2 1891855 1894076 -248793778 + L1HS LINE L1 3951 6155 0 335 257 0 27 chr2 1894074 1894222 -248793632 + L1MC3 LINE L1 3252 3395 -2751 * 821 237 60 73 chr2 1894208 1894605 -248793249 + L1MC3 LINE L1 4877 5268 -878 3646 199 12 4 chr2 1894605 1895328 -248792526 + Tigger2 DNA MER2_type 1 729 -1989 1113 170 122 0 chr2 1895368 1895598 -248792256 + Tigger2 DNA MER2_type 2461 2718 0 9649 205 50 22 chr2 1895602 1896906 -248790948 + L1MC3 LINE L1 5271 6675 -1110 402 21 0 0 chr2 1896906 1896953 -248790901 + (TG)n Simple_repeat Simple_repeat 2 48 0 9649 205 50 22 chr2 1896953 1898080 -248789774 + L1MC3 LINE L1 6675 7769 -16 272 237 237 9 chr2 1898162 1898276 -248789578 + MIR SINE MIR 113 252 -10 253 215 152 0 chr2 1898279 1898358 -248789496 + MARNA DNA Mariner 133 223 -363 22 70 0 0 chr2 1898410 1898453 -248789401 + AT_rich Low_complexity Low_complexity 1 43 0 378 338 77 30 chr2 1898550 1898784 -248789070 + MIR SINE MIR 18 262 0 28 48 0 0 chr2 1898817 1898859 -248788995 + AT_rich Low_complexity Low_complexity 1 42 0 24 0 0 0 chr2 1898979 1899003 -248788851 + AT_rich Low_complexity Low_complexity 1 24 0 219 88 0 0 chr2 1899859 1899893 -248787961 + (GA)n Simple_repeat Simple_repeat 1 34 0 30 0 0 0 chr2 1900477 1900507 -248787347 + AT_rich Low_complexity Low_complexity 1 30 0 1928 147 0 3 chr2 1901767 1902052 -248785802 + AluSx SINE Alu 1 284 -28 2933 202 37 7 chr2 1902192 1902787 -248785067 - MSTB-int LTR MaLR -1038 613 1 2124 181 43 17 chr2 1902787 1903202 -248784652 - MSTB LTR MaLR 0 426 1 328 71 0 0 chr2 1903202 1903244 -248784610 + MSTC LTR MaLR 381 422 -6 1551 167 30 79 chr2 1903267 1903406 -248784448 + MLT2A2 LTR ERVL 52 196 -358 2449 70 0 6 chr2 1903406 1903719 -248784135 + AluY SINE Alu 1 311 0 1551 167 30 79 chr2 1903719 1904091 -248783763 + MLT2A2 LTR ERVL 196 554 0 333 0 0 0 chr2 1906571 1906608 -248781246 + (TC)n Simple_repeat Simple_repeat 2 38 0 647 258 75 0 chr2 1906827 1907013 -248780841 + MER63A DNA MER1_type 3 202 -8 30 0 0 0 chr2 1907733 1907763 -248780091 + AT_rich Low_complexity Low_complexity 1 30 0 258 224 0 0 chr2 1908073 1908158 -248779696 + CT-rich Low_complexity Low_complexity 1 85 0 283 289 52 82 chr2 1908977 1909112 -248778742 - MIR SINE MIR -13 249 119 21 57 0 0 chr2 1909241 1909276 -248778578 + AT_rich Low_complexity Low_complexity 1 35 0 2276 123 0 0 chr2 1909681 1909989 -248777865 + AluSg SINE Alu 1 308 -2 226 220 147 37 chr2 1910079 1910188 -248777666 + MIR SINE MIR 107 227 -35 2064 127 0 3 chr2 1910936 1911236 -248776618 - AluSq SINE Alu 0 313 15 207 0 0 0 chr2 1911239 1911262 -248776592 + (T)n Simple_repeat Simple_repeat 1 23 0 182 37 37 0 chr2 1913596 1913623 -248774231 + (TTTTTG)n Simple_repeat Simple_repeat 1 28 0 505 275 50 84 chr2 1913871 1914489 -248773365 - HAL1 LINE L1 -886 1621 1025 21 36 0 0 chr2 1914535 1914563 -248773291 + AT_rich Low_complexity Low_complexity 1 28 0 236 53 26 0 chr2 1915173 1915211 -248772643 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2049 70 0 77 chr2 1915214 1915514 -248772340 - AluY SINE Alu -34 277 1 2049 136 13 0 chr2 1915809 1916111 -248771743 + AluSx SINE Alu 3 308 -4 180 125 0 0 chr2 1916731 1916763 -248771091 + (CA)n Simple_repeat Simple_repeat 2 33 0 219 280 25 68 chr2 1916795 1916913 -248770941 - L2 LINE L2 -4 3309 3197 430 322 37 28 chr2 1918512 1918726 -248769128 - MIR SINE MIR -24 238 23 341 146 0 0 chr2 1919929 1919984 -248767870 + L1P5 LINE L1 5391 5445 -709 3451 55 2 0 chr2 1919993 1920427 -248767427 + L1PA5 LINE L1 5718 6152 -2 3334 188 120 5 chr2 1920438 1921206 -248766648 + L1MA8 LINE L1 5428 6283 -8 370 305 18 24 chr2 1921964 1922128 -248765726 - L1MD3 LINE L1 -5 7990 7828 330 67 317 0 chr2 1922767 1922827 -248765027 + MADE1 DNA Mariner 1 79 -1 181 278 0 0 chr2 1923402 1923438 -248764416 - L2 LINE L2 -16 3256 3221 432 248 58 7 chr2 1923520 1923657 -248764197 + L1M4 LINE L1 2436 2579 -3567 306 273 88 68 chr2 1924186 1924585 -248763269 + HAL1b LINE L1 68 474 -874 * 1846 284 89 30 chr2 1924582 1926106 -248761748 - L1MDa LINE L1 -1587 4819 3175 * 6099 218 37 14 chr2 1926102 1928158 -248759696 + L1MA4 LINE L1 4 2131 -4197 3445 83 0 0 chr2 1928158 1928602 -248759252 + MLT2A1 LTR ERVL 1 444 0 6099 218 37 14 chr2 1928602 1929244 -248758610 + L1MA4 LINE L1 2131 2756 -3572 5550 183 28 50 chr2 1929237 1930103 -248757751 + L1MA4 LINE L1 4061 4945 -1537 * 1949 117 25 3 chr2 1930103 1930463 -248757391 + AluSc SINE Alu 1 309 0 5550 183 28 50 chr2 1930463 1932018 -248755836 + L1MA4 LINE L1 4945 6425 -57 2281 87 0 3 chr2 1932018 1932305 -248755549 + AluY SINE Alu 3 288 -23 5550 183 28 50 chr2 1932305 1932356 -248755498 + L1MA4 LINE L1 6425 6476 -6 1231 266 85 23 chr2 1932391 1933053 -248754801 - L1MDa LINE L1 -3231 3175 2473 545 254 76 61 chr2 1933077 1933655 -248754199 - L1MDa LINE L1 -3984 2422 1836 307 214 0 95 chr2 1933661 1933787 -248754067 - L1MDa LINE L1 -4935 1471 1358 2084 74 0 0 chr2 1933787 1934057 -248753797 - L1PA6 LINE L1 0 6154 5885 502 308 44 54 chr2 1934094 1934591 -248753263 - L1MDa LINE L1 -5142 1267 776 2233 91 7 10 chr2 1936209 1936518 -248751336 - AluY SINE Alu -3 308 1 1390 210 35 11 chr2 1936523 1936809 -248751045 - AluJo SINE Alu -19 293 1 3923 262 64 48 chr2 1938593 1939483 -248748371 + L1MEc LINE L1 2078 2952 -3263 261 0 0 0 chr2 1939483 1939512 -248748342 + (CAA)n Simple_repeat Simple_repeat 2 30 0 3923 262 64 48 chr2 1939512 1940845 -248747009 + L1MEc LINE L1 2952 4287 -1928 2335 278 55 43 chr2 1941207 1941321 -248746533 + L1MCb LINE L1 3 114 -5931 1528 166 50 68 chr2 1941321 1941701 -248746153 - THE1C LTR MaLR 0 375 3 2335 278 55 43 chr2 1941701 1942622 -248745232 + L1MCb LINE L1 114 1050 -4995 581 281 64 54 chr2 1942648 1943117 -248744737 + MER77 LTR ERV1 53 603 -2 271 190 25 25 chr2 1943284 1943363 -248744491 + L1MCb LINE L1 1057 1135 -5429 627 41 0 31 chr2 1943426 1943524 -248744330 + (TCTA)n Simple_repeat Simple_repeat 3 97 0 2371 249 34 35 chr2 1943549 1944638 -248743216 + L1MCb LINE L1 2384 3471 -3093 2487 42 3 10 chr2 1944638 1944945 -248742909 - AluY SINE Alu -6 305 1 2371 249 34 35 chr2 1944945 1945167 -248742687 + L1MCb LINE L1 3471 3692 -2872 31556 36 34 2 chr2 1945180 1949097 -248738757 + L1P LINE L1 1 4044 -2102 1986 116 20 10 chr2 1949197 1949490 -248738364 - AluSq SINE Alu -17 296 1 269 282 14 0 chr2 1949633 1949704 -248738150 + MIR SINE MIR 126 197 -65 329 202 23 132 chr2 1950668 1950797 -248737057 - MER5B DNA MER1_type -58 120 6 23 0 0 0 chr2 1953265 1953288 -248734566 + AT_rich Low_complexity Low_complexity 1 23 0 32 0 0 0 chr2 1953586 1953618 -248734236 + AT_rich Low_complexity Low_complexity 1 32 0 276 30 0 0 chr2 1953730 1953763 -248734091 + (TG)n Simple_repeat Simple_repeat 2 34 0 1242 218 72 50 chr2 1953802 1954164 -248733690 - MLT1A2 LTR MaLR -1 373 4 497 328 134 22 chr2 1954594 1954627 -248733227 - MLT1I LTR MaLR -2 407 379 1944 219 72 9 chr2 1954627 1955071 -248732783 - MER70A LTR ERVL 0 472 1 497 328 134 22 chr2 1955071 1955403 -248732451 - MLT1I LTR MaLR -30 379 1 453 323 111 49 chr2 1956686 1957073 -248730781 + L2 LINE L2 2504 2914 -400 367 315 49 27 chr2 1957153 1957337 -248730517 + L2 LINE L2 3122 3309 -4 23 0 0 0 chr2 1957826 1957849 -248730005 + AT_rich Low_complexity Low_complexity 1 23 0 289 322 21 10 chr2 1959216 1959318 -248728536 - MIR SINE MIR -66 142 40 189 242 145 0 chr2 1959445 1959507 -248728347 - MIR SINE MIR -105 103 33 2171 131 34 25 chr2 1959719 1960077 -248727777 - THE1B LTR MaLR -3 361 1 32 86 0 0 chr2 1960254 1960335 -248727519 + AT_rich Low_complexity Low_complexity 1 81 0 273 279 90 33 chr2 1961318 1961440 -248726414 - L2 LINE L2 -467 2847 2719 550 257 28 19 chr2 1961496 1961710 -248726144 - L1ME3 LINE L1 -2 6160 5945 339 247 12 0 chr2 1961725 1961806 -248726048 - L1ME3 LINE L1 -285 5885 5804 270 381 124 22 chr2 1961843 1962213 -248725641 - L2 LINE L2 -609 2705 2298 2893 59 0 5 chr2 1962744 1963133 -248724721 + L1PA7 LINE L1 5743 6129 -25 495 262 84 42 chr2 1963686 1963877 -248723977 - MLT1J2 LTR MaLR -251 199 1 315 0 0 0 chr2 1964236 1964271 -248723583 + (TG)n Simple_repeat Simple_repeat 2 36 0 199 133 44 0 chr2 1964325 1964370 -248723484 + CT-rich Low_complexity Low_complexity 2 48 0 2367 83 6 0 chr2 1965960 1966285 -248721569 + L1PA8 LINE L1 5843 6169 -3 2390 80 0 3 chr2 1966759 1967059 -248720795 + AluSc SINE Alu 1 299 -10 185 358 37 0 chr2 1968833 1968914 -248718940 + MIR SINE MIR 60 143 -119 474 163 0 0 chr2 1970008 1970100 -248717754 - MER53 DNA DNA -2 187 96 1809 239 38 50 chr2 1970212 1971119 -248716735 - L1M4 LINE L1 -2497 3649 2754 262 224 31 31 chr2 1971382 1971543 -248716311 + (TA)n Simple_repeat Simple_repeat 2 162 0 420 136 0 0 chr2 1972209 1972268 -248715586 - AluS SINE Alu -237 72 14 1822 175 14 0 chr2 1973043 1973340 -248714514 - AluJo SINE Alu -10 302 2 2636 20 0 3 chr2 1973975 1974274 -248713580 - AluY SINE Alu -13 298 1 285 51 0 0 chr2 1974543 1974582 -248713272 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 309 309 94 69 chr2 1974638 1975042 -248712812 + HAL1 LINE L1 770 1183 -1324 998 223 36 43 chr2 1975042 1975347 -248712507 + MLT1C LTR MaLR 1 303 -164 244 215 114 0 chr2 1975469 1975548 -248712306 + HAL1 LINE L1 1198 1285 -1222 403 253 114 6 chr2 1976683 1976841 -248711013 + MLT1J2 LTR MaLR 8 182 -268 345 238 30 40 chr2 1976840 1976941 -248710913 + MLT1J1 LTR MaLR 202 301 -145 * 329 236 46 78 chr2 1978998 1979201 -248708653 + MIR SINE MIR 44 247 -15 653 250 56 12 chr2 1979692 1980014 -248707840 - MSTD LTR MaLR -14 382 1 21 0 0 0 chr2 1980186 1980207 -248707647 + AT_rich Low_complexity Low_complexity 1 21 0 2172 85 0 11 chr2 1980735 1981017 -248706837 + AluSg SINE Alu 1 279 -31 565 100 0 0 chr2 1981481 1981561 -248706293 + MADE1 DNA Mariner 1 80 0 403 296 72 34 chr2 1981867 1982131 -248705723 + L2 LINE L2 737 1010 -2304 685 250 6 33 chr2 1982154 1982334 -248705520 - FAM SINE Alu 0 175 1 1048 329 68 68 chr2 1982342 1983355 -248704499 + L2 LINE L2 1747 2759 -555 240 377 32 13 chr2 1983955 1984109 -248703745 + L2 LINE L2 2797 2953 -361 21 0 0 0 chr2 1984109 1984130 -248703724 + AT_rich Low_complexity Low_complexity 1 21 0 325 153 14 56 chr2 1984267 1984339 -248703515 - MLT1G LTR MaLR -306 284 216 791 308 42 39 chr2 1984727 1985087 -248702767 - L2 LINE L2 -536 2778 2418 365 326 8 8 chr2 1985266 1985395 -248702459 + MER58A DNA MER1_type 4 132 0 238 267 33 0 chr2 1985404 1985464 -248702390 + MER58A DNA MER1_type 163 224 0 233 229 37 83 chr2 1986762 1986871 -248700983 + MLT1D LTR MaLR 6 109 -517 596 269 88 4 chr2 1986907 1987145 -248700709 + MLT1D LTR MaLR 180 437 -68 4385 237 36 23 chr2 1988143 1988232 -248699622 - Charlie1a DNA MER1_type -1319 1442 1356 2042 156 27 16 chr2 1988232 1988603 -248699251 - THE1C LTR MaLR 0 375 1 9264 134 30 41 chr2 1988603 1990198 -248697656 - THE1C-int LTR MaLR 0 1580 3 1382 201 88 28 chr2 1990200 1990554 -248697300 - THE1C LTR MaLR 0 375 1 4385 237 36 23 chr2 1990554 1991871 -248695983 - Charlie1a DNA MER1_type -1405 1356 13 264 204 32 65 chr2 1993850 1993943 -248693911 - MLT1J LTR MaLR -379 132 43 305 330 82 21 chr2 1994374 1994607 -248693247 + L1MEd LINE L1 563 809 -5310 191 259 0 12 chr2 1994730 1994811 -248693043 + (TA)n Simple_repeat Simple_repeat 1 80 0 342 246 54 42 chr2 1994871 1995038 -248692816 + L1MEd LINE L1 1014 1182 -4937 8386 29 0 0 chr2 1995235 1996268 -248691586 - L1PA3 LINE L1 -1236 4910 3878 7707 19 2 0 chr2 1996268 1997546 -248690308 + L1PA3 LINE L1 4918 6197 0 2323 78 0 0 chr2 1997651 1997933 -248689921 + AluSx SINE Alu 1 282 -30 2010 279 68 44 chr2 1998576 1999257 -248688597 + L1ME1 LINE L1 43 767 -5629 2497 71 0 3 chr2 1999257 1999568 -248688286 + AluY SINE Alu 1 310 -1 2010 279 68 44 chr2 1999568 2000093 -248687761 + L1ME1 LINE L1 767 1278 -5118 1781 181 0 7 chr2 2000100 2000403 -248687451 - AluSx SINE Alu -11 301 1 288 0 0 0 chr2 2000524 2000556 -248687298 + (A)n Simple_repeat Simple_repeat 1 32 0 1314 277 133 20 chr2 2000556 2002233 -248685621 + L1ME1 LINE L1 1624 3426 -2789 900 237 111 45 chr2 2002221 2002268 -248685586 + L1ME1 LINE L1 4525 4567 -1648 * 222 118 0 0 chr2 2002268 2002302 -248685552 + (CA)n Simple_repeat Simple_repeat 1 34 0 900 237 111 45 chr2 2002302 2002769 -248685085 + L1ME1 LINE L1 4567 5073 -1142 905 158 0 0 chr2 2002773 2002906 -248684948 + AluSq/x SINE Alu 1 133 -179 1592 266 46 59 chr2 2003010 2004157 -248683697 + L1ME1 LINE L1 5109 6230 -5 1866 168 0 7 chr2 2004296 2004594 -248683260 + AluJb SINE Alu 1 296 -16 216 0 0 0 chr2 2004598 2004622 -248683232 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 490 277 94 24 chr2 2004978 2005269 -248682585 + L1ME3A LINE L1 5616 5922 -256 2167 135 0 0 chr2 2005351 2005648 -248682206 + AluSx SINE Alu 1 297 -15 2669 39 0 0 chr2 2005870 2006175 -248681679 + AluY SINE Alu 1 305 -6 1516 218 120 30 chr2 2006464 2006956 -248680898 - MER68 LTR ERV1 -4 558 23 259 282 57 16 chr2 2007783 2007907 -248679947 - L1ME4a LINE L1 -47 6074 5946 234 174 0 0 chr2 2007929 2007975 -248679879 + (TA)n Simple_repeat Simple_repeat 1 46 0 195 162 0 0 chr2 2009086 2009123 -248678731 + (TATG)n Simple_repeat Simple_repeat 4 40 0 184 250 115 0 chr2 2009543 2009595 -248678259 + L2 LINE L2 3117 3174 -98 188 336 75 15 chr2 2010099 2010233 -248677621 - MIR3 SINE MIR -35 173 32 2223 106 3 0 chr2 2010486 2010779 -248677075 + AluSq SINE Alu 1 294 -19 416 394 33 21 chr2 2011165 2011500 -248676354 + L3 LINE CR1 1084 1422 -155 23 33 0 0 chr2 2012080 2012110 -248675744 + AT_rich Low_complexity Low_complexity 1 30 0 25 51 0 0 chr2 2012761 2012800 -248675054 + AT_rich Low_complexity Low_complexity 1 39 0 24 53 0 0 chr2 2013411 2013449 -248674405 + AT_rich Low_complexity Low_complexity 1 38 0 24 0 0 0 chr2 2013725 2013749 -248674105 + AT_rich Low_complexity Low_complexity 1 24 0 2327 118 8 30 chr2 2014415 2014787 -248673067 - THE1B LTR MaLR 0 364 1 11439 100 8 11 chr2 2014787 2016372 -248671482 - THE1B-int LTR MaLR 0 1580 1 2277 120 19 25 chr2 2016372 2016738 -248671116 - THE1B LTR MaLR 0 364 1 1436 221 24 3 chr2 2017329 2017659 -248670195 + MER2 DNA MER2_type 1 337 -8 557 301 92 15 chr2 2017770 2017976 -248669878 - MIR SINE MIR -27 235 14 307 375 97 21 chr2 2018763 2019051 -248668803 - L2 LINE L2 -1 3271 2962 2324 120 19 6 chr2 2019384 2019743 -248668111 - THE1B LTR MaLR 0 364 1 1497 190 47 0 chr2 2020427 2020701 -248667153 - AluJb SINE Alu -24 288 2 21 0 0 0 chr2 2020766 2020787 -248667067 + AT_rich Low_complexity Low_complexity 1 21 0 1718 172 6 21 chr2 2021119 2021451 -248666403 + MLT1A1 LTR MaLR 33 359 -6 243 61 0 0 chr2 2022558 2022591 -248665263 + (TG)n Simple_repeat Simple_repeat 2 34 0 353 250 11 11 chr2 2023703 2023795 -248664059 + L2 LINE L2 3221 3312 -1 12762 160 19 10 chr2 2024782 2027144 -248660710 + Tigger1 DNA MER2_type 26 2410 -8 254 26 53 0 chr2 2028478 2028516 -248659338 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 195 290 129 16 chr2 2030261 2030385 -248657469 + MIR SINE MIR 107 244 -18 383 169 0 0 chr2 2031389 2031466 -248656388 - L1PA15 LINE L1 -2 6163 6087 2906 155 21 6 chr2 2031468 2031990 -248655864 - L1PA15 LINE L1 -187 5978 5449 869 185 25 35 chr2 2032901 2033101 -248654753 + MER20 DNA MER1_type 1 198 -21 24 0 0 0 chr2 2033554 2033578 -248654276 + AT_rich Low_complexity Low_complexity 1 24 0 492 357 61 5 chr2 2034410 2034623 -248653231 + L2 LINE L2 2891 3115 -198 204 40 0 0 chr2 2034632 2034657 -248653197 + (TTTAA)n Simple_repeat Simple_repeat 3 27 0 1289 152 17 35 chr2 2034657 2034879 -248652975 - AluJo SINE Alu -29 283 64 395 266 105 0 chr2 2035137 2035280 -248652574 - MIR SINE MIR -13 249 92 306 0 0 0 chr2 2035595 2035629 -248652225 + (TG)n Simple_repeat Simple_repeat 1 34 0 216 333 19 0 chr2 2035668 2035722 -248652132 + MER5A DNA MER1_type 72 126 -63 2371 235 34 14 chr2 2037299 2037954 -248649900 + Charlie1a DNA MER1_type 1 668 -787 827 181 84 34 chr2 2037973 2038210 -248649644 + Charlie1a DNA MER1_type 856 1104 -351 1523 179 94 21 chr2 2038774 2038890 -248648964 + L1MA9 LINE L1 5717 5823 -489 1708 213 29 79 chr2 2038890 2039473 -248648381 - MLT2B3 LTR ERVL 0 554 1 1523 179 94 21 chr2 2039473 2039820 -248648034 + L1MA9 LINE L1 5823 6312 0 845 174 0 0 chr2 2039913 2040045 -248647809 - FRAM SINE Alu -24 152 21 1644 172 97 3 chr2 2043145 2043453 -248644401 - MER1B DNA MER1_type 0 337 1 198 294 0 0 chr2 2044086 2044137 -248643717 - L2 LINE L2 0 3313 3263 1991 153 3 10 chr2 2044233 2044547 -248643307 + AluSx SINE Alu 1 312 0 555 327 104 78 chr2 2044575 2045993 -248641861 - L2 LINE L2 -220 3093 1636 814 302 66 13 chr2 2046531 2046836 -248641018 + LTR16A LTR ERVL 120 440 -10 1073 256 55 23 chr2 2046837 2047236 -248640618 + MLT1C LTR MaLR 1 412 -55 321 384 12 16 chr2 2047425 2047680 -248640174 + ERVL LTR ERVL 4744 4997 -767 1817 186 0 0 chr2 2048037 2048333 -248639521 + AluSx SINE Alu 1 296 -16 1983 141 14 39 chr2 2049023 2049385 -248638469 - L1PA16 LINE L1 -9 6157 5805 277 169 3 0 chr2 2049390 2049454 -248638400 + L1PA16 LINE L1 5752 5801 -365 27 0 0 0 chr2 2049884 2049911 -248637943 + AT_rich Low_complexity Low_complexity 1 27 0 25 0 0 0 chr2 2050188 2050213 -248637641 + AT_rich Low_complexity Low_complexity 1 25 0 832 237 83 28 chr2 2050500 2050863 -248636991 - LTR52 LTR ERVL -37 384 2 1755 158 177 11 chr2 2051236 2051603 -248636251 - MSTA LTR MaLR 0 428 1 284 331 19 0 chr2 2051731 2051885 -248635969 + L1MEc LINE L1 101 257 -6139 1790 266 63 49 chr2 2052727 2053792 -248634062 + L1M4 LINE L1 4174 5253 -893 21 0 0 0 chr2 2055078 2055099 -248632755 + AT_rich Low_complexity Low_complexity 1 21 0 232 297 11 22 chr2 2055393 2055484 -248632370 + L1MEc LINE L1 112 201 -6195 297 323 39 32 chr2 2055543 2055822 -248632032 + L1ME2 LINE L1 5874 6154 -10 22 0 0 0 chr2 2056036 2056058 -248631796 + AT_rich Low_complexity Low_complexity 1 22 0 318 275 23 69 chr2 2056624 2056683 -248631171 - L1MB7 LINE L1 0 6184 6124 2893 151 40 31 chr2 2056683 2057205 -248630649 + MER1A DNA MER1_type 1 527 0 318 275 23 69 chr2 2057205 2057276 -248630578 - L1MB7 LINE L1 -60 6124 6060 1447 216 47 38 chr2 2057312 2057674 -248630180 - L1MB8 LINE L1 -99 6079 5711 1300 199 3 101 chr2 2057674 2058010 -248629844 + AluJo SINE Alu 1 303 -9 1447 216 47 38 chr2 2058010 2058092 -248629762 - L1MB8 LINE L1 -467 5711 5631 1714 254 65 15 chr2 2058092 2058752 -248629102 - L1M4 LINE L1 -3224 2922 2230 232 271 62 70 chr2 2059114 2059243 -248628611 + L2 LINE L2 3164 3291 -22 411 318 83 28 chr2 2059266 2059665 -248628189 + L1 LINE L1 4207 4627 -1519 21 57 0 0 chr2 2059693 2059728 -248628126 + AT_rich Low_complexity Low_complexity 1 35 0 440 235 20 0 chr2 2059926 2060024 -248627830 + MER46A DNA MER2_type 47 146 -90 * 990 199 57 64 chr2 2060022 2060318 -248627536 + MER2 DNA MER2_type 51 344 -1 209 184 0 0 chr2 2061225 2061263 -248626591 - MIR SINE MIR -168 94 57 201 270 63 3 chr2 2061266 2061348 -248626506 - MIR SINE MIR -64 144 81 536 276 0 17 chr2 2061676 2061857 -248625997 + (CA)n Simple_repeat Simple_repeat 1 178 0 273 364 33 54 chr2 2062153 2062337 -248625517 + L2 LINE L2 3075 3254 -18 303 335 80 17 chr2 2062379 2062555 -248625299 + MIR SINE MIR 49 235 -27 233 321 18 113 chr2 2064781 2064949 -248622905 + MIR SINE MIR 23 174 -88 22 0 0 0 chr2 2067624 2067646 -248620208 + AT_rich Low_complexity Low_complexity 1 22 0 450 109 75 9 chr2 2067991 2068338 -248619516 + (TA)n Simple_repeat Simple_repeat 1 370 0 27 73 0 0 chr2 2068417 2068472 -248619382 + AT_rich Low_complexity Low_complexity 1 55 0 192 77 0 0 chr2 2068475 2068501 -248619353 + (CATA)n Simple_repeat Simple_repeat 2 27 0 268 304 96 64 chr2 2069679 2069804 -248618050 + MIR3 SINE MIR 6 134 -74 278 294 22 44 chr2 2069806 2069942 -248617912 + MER94 DNA DNA 1 133 -1 242 194 16 0 chr2 2070378 2070440 -248617414 + GA-rich Low_complexity Low_complexity 4 66 0 279 324 72 9 chr2 2070645 2070756 -248617098 + L2 LINE L2 3195 3312 -1 1572 133 8 0 chr2 2071204 2071452 -248616402 + L1PA13 LINE L1 5905 6154 -9 420 301 20 14 chr2 2071515 2071661 -248616193 - MIR SINE MIR 0 262 116 200 114 68 0 chr2 2073614 2073658 -248614196 + T-rich Low_complexity Low_complexity 1 47 0 236 97 65 0 chr2 2074333 2074395 -248613459 + (TA)n Simple_repeat Simple_repeat 1 66 0 207 381 114 11 chr2 2077578 2077754 -248610100 - L2 LINE L2 -433 2881 2688 25 0 0 0 chr2 2078137 2078162 -248609692 + AT_rich Low_complexity Low_complexity 1 25 0 396 40 0 0 chr2 2078521 2078571 -248609283 + (CA)n Simple_repeat Simple_repeat 1 50 0 218 384 0 0 chr2 2079600 2079699 -248608155 + (CA)n Simple_repeat Simple_repeat 2 100 0 308 304 0 22 chr2 2079716 2079808 -248608046 + L1MC4 LINE L1 6614 6703 -1339 21 36 0 0 chr2 2080175 2080203 -248607651 + AT_rich Low_complexity Low_complexity 1 28 0 223 163 41 0 chr2 2081623 2081672 -248606182 + A-rich Low_complexity Low_complexity 3 53 0 483 302 148 0 chr2 2081686 2081888 -248605966 - MIR SINE MIR -27 235 4 404 296 99 28 chr2 2082058 2082271 -248605583 + MIR SINE MIR 32 259 -3 1759 214 84 15 chr2 2082993 2083447 -248604407 - MER66B LTR ERV1 -1 485 1 873 67 0 8 chr2 2083553 2083673 -248604181 + L1PB1 LINE L1 6030 6148 -3 1342 187 45 11 chr2 2085090 2085443 -248602411 + MER50 LTR ERV1 94 458 -276 3033 168 96 30 chr2 2085443 2086596 -248601258 + pTR5 LTR ERV1 35 455 -259 1041 177 112 0 chr2 2086596 2086828 -248601026 + MER50 LTR ERV1 453 710 -24 22 35 0 0 chr2 2087173 2087202 -248600652 + AT_rich Low_complexity Low_complexity 1 29 0 24 53 0 0 chr2 2088598 2088636 -248599218 + AT_rich Low_complexity Low_complexity 1 38 0 360 343 42 0 chr2 2088670 2088813 -248599041 + L1MC4 LINE L1 6768 6916 -1126 257 250 43 9 chr2 2088827 2088943 -248598911 + L1ME3A LINE L1 5993 6112 -58 369 0 0 0 chr2 2088961 2089002 -248598852 + (TG)n Simple_repeat Simple_repeat 2 42 0 349 238 131 52 chr2 2089059 2089311 -248598543 + L1MC4 LINE L1 6958 7229 -813 558 266 94 11 chr2 2089879 2090154 -248597700 + AluSx SINE Alu 5 302 0 1006 168 0 0 chr2 2090661 2090816 -248597038 - AluSg/x SINE Alu -3 307 153 2238 92 0 14 chr2 2091386 2091681 -248596173 + AluY SINE Alu 1 291 -20 1200 215 63 26 chr2 2092484 2092833 -248595021 + MLT1A1 LTR MaLR 1 362 -3 187 200 0 80 chr2 2093765 2093815 -248594039 + L3 LINE CR1 1188 1233 -344 322 285 45 63 chr2 2094552 2094807 -248593047 - MIR SINE MIR -13 249 1 923 140 6 0 chr2 2095428 2095599 -248592255 + (TG)n Simple_repeat Simple_repeat 2 173 0 1561 189 28 7 chr2 2095882 2096168 -248591686 + AluSx SINE Alu 1 292 -20 194 274 105 32 chr2 2096518 2096613 -248591241 + MIR SINE MIR 116 217 -45 206 235 0 44 chr2 2096726 2096794 -248591060 + GA-rich Low_complexity Low_complexity 4 68 0 263 299 90 68 chr2 2097287 2097464 -248590390 + MIR SINE MIR 22 202 -60 1645 161 84 0 chr2 2097560 2097846 -248590008 + AluSx SINE Alu 1 310 -2 573 248 183 43 chr2 2098071 2098486 -248589368 + L1MC4a LINE L1 7026 7498 -310 610 83 0 0 chr2 2098502 2098586 -248589268 + AluY SINE Alu 214 297 -14 22 94 0 0 chr2 2098786 2098850 -248589004 + AT_rich Low_complexity Low_complexity 1 64 0 23 33 0 0 chr2 2098966 2098996 -248588858 + AT_rich Low_complexity Low_complexity 1 30 0 31 44 0 0 chr2 2099247 2099292 -248588562 + AT_rich Low_complexity Low_complexity 1 45 0 1767 226 11 8 chr2 2099480 2099842 -248588012 - MLT1A1 LTR MaLR -2 363 1 195 286 67 84 chr2 2100084 2100203 -248587651 - L2 LINE L2 -1724 1590 1474 29 47 0 0 chr2 2100413 2100456 -248587398 + AT_rich Low_complexity Low_complexity 1 43 0 272 267 0 0 chr2 2100542 2100602 -248587252 + MSTC LTR MaLR 49 108 -320 274 317 10 0 chr2 2101863 2101964 -248585890 + MLT1J LTR MaLR 77 178 -333 1359 162 35 4 chr2 2102634 2102862 -248584992 + AluSg/x SINE Alu 73 307 -5 2334 85 7 0 chr2 2102940 2103234 -248584620 + AluSc SINE Alu 1 296 -13 1965 121 17 17 chr2 2103746 2104035 -248583819 + AluSx SINE Alu 1 289 -23 358 115 16 0 chr2 2104038 2104099 -248583755 - L1MB4 LINE L1 -28 6152 6091 2151 120 13 0 chr2 2104551 2104859 -248582995 - AluSp SINE Alu -1 312 1 3384 238 87 26 chr2 2104978 2105267 -248582587 + MER45B DNA AcHobo 1 271 -1310 2251 173 14 42 chr2 2105267 2105701 -248582153 - MSTB LTR MaLR -4 422 1 3384 238 87 26 chr2 2105701 2106392 -248581462 + MER45B DNA AcHobo 271 1040 0 845 261 28 21 chr2 2106589 2106880 -248580974 - L1PB3 LINE L1 -2986 3160 2868 5646 206 103 4 chr2 2106880 2108243 -248579611 + L1PB3 LINE L1 3186 4683 -1463 2009 173 55 107 chr2 2108233 2108444 -248579410 + L1PB3 LINE L1 5567 5788 -366 * 261 0 0 0 chr2 2108444 2108473 -248579381 + (TG)n Simple_repeat Simple_repeat 2 30 0 2009 173 55 107 chr2 2108473 2108545 -248579309 + L1PB3 LINE L1 5788 5862 -292 273 29 0 0 chr2 2108545 2108579 -248579275 + (TG)n Simple_repeat Simple_repeat 1 34 0 2009 173 55 107 chr2 2108579 2108900 -248578954 + L1PB3 LINE L1 5862 6140 -14 240 35 0 0 chr2 2109751 2109780 -248578074 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2155 86 0 0 chr2 2109782 2110061 -248577793 - AluY SINE Alu -32 279 1 195 368 35 49 chr2 2112495 2112639 -248575215 - MIR3 SINE MIR -52 156 15 21 0 0 0 chr2 2113732 2113753 -248574101 + AT_rich Low_complexity Low_complexity 1 21 0 236 244 41 32 chr2 2114897 2115020 -248572834 + (TG)n Simple_repeat Simple_repeat 1 124 0 2067 132 6 6 chr2 2115135 2115446 -248572408 + AluSx SINE Alu 1 311 -1 23 0 0 0 chr2 2115542 2115565 -248572289 + AT_rich Low_complexity Low_complexity 1 23 0 2090 180 78 24 chr2 2116549 2116961 -248570893 + Tigger2a DNA MER2_type 1 434 0 1456 196 43 51 chr2 2117172 2117565 -248570289 - MLT1B LTR MaLR 0 390 1 245 109 62 0 chr2 2117622 2117686 -248570168 + (TG)n Simple_repeat Simple_repeat 2 69 0 240 190 6 49 chr2 2117834 2117997 -248569857 + (TG)n Simple_repeat Simple_repeat 1 156 0 401 219 31 31 chr2 2118037 2118197 -248569657 + (TG)n Simple_repeat Simple_repeat 2 161 0 312 294 51 110 chr2 2118301 2118469 -248569385 + L2 LINE L2 2736 2886 -428 2240 116 0 22 chr2 2118469 2118788 -248569066 - AluSx SINE Alu 0 312 1 312 294 51 110 chr2 2118788 2118874 -248568980 + L2 LINE L2 2886 2975 -339 288 130 0 0 chr2 2119105 2119151 -248568703 + (TTTC)n Simple_repeat Simple_repeat 3 48 0 186 150 50 25 chr2 2119281 2119321 -248568533 + L2 LINE L2 2425 2465 -849 363 235 23 68 chr2 2119328 2119460 -248568394 + MER5B DNA MER1_type 23 148 -30 1882 130 7 0 chr2 2119508 2119784 -248568070 + MER61A LTR ERV1 65 342 -1 563 213 5 109 chr2 2120751 2120962 -248566892 - MER53 DNA DNA 0 189 1 1951 121 21 0 chr2 2121730 2122010 -248565844 + AluSx SINE Alu 1 286 -26 261 88 0 53 chr2 2125032 2125089 -248562765 + (TTTTC)n Simple_repeat Simple_repeat 3 56 0 3279 191 14 35 chr2 2125214 2125354 -248562500 + MER4D LTR ERV1 217 358 -545 2712 100 14 0 chr2 2125354 2125704 -248562150 + THE1A LTR MaLR 1 355 0 3279 191 14 35 chr2 2125704 2126255 -248561599 + MER4D LTR ERV1 358 894 -9 4364 114 116 130 chr2 2126835 2128260 -248559594 - pTR5 LTR ERV1 0 2438 743 2574 154 18 0 chr2 2128644 2129040 -248558814 + MER57A LTR ERV1 1 403 0 342 273 27 18 chr2 2129090 2129200 -248558654 + MIR3 SINE MIR 89 199 -9 309 264 213 7 chr2 2129411 2129591 -248558263 - MIR SINE MIR -6 256 38 204 254 0 34 chr2 2131130 2131189 -248556665 + GA-rich Low_complexity Low_complexity 2 58 0 259 272 43 11 chr2 2131473 2131565 -248556289 - L1ME LINE L1 -439 5682 5588 220 222 19 0 chr2 2131822 2131876 -248555978 + (CA)n Simple_repeat Simple_repeat 1 55 0 1978 173 80 0 chr2 2131901 2132213 -248555641 - MER1B DNA MER1_type 0 337 1 4303 307 116 28 chr2 2133066 2133276 -248554578 - L2 LINE L2 -615 2699 2509 185 0 40 0 chr2 2133276 2133301 -248554553 + (TTG)n Simple_repeat Simple_repeat 2 27 0 4303 307 116 28 chr2 2133301 2134941 -248552913 - L2 LINE L2 -805 2509 632 2307 100 0 0 chr2 2134941 2135241 -248552613 + AluSc SINE Alu 1 300 -9 4303 307 116 28 chr2 2135241 2135534 -248552320 - L2 LINE L2 -2682 632 366 1429 237 52 43 chr2 2135578 2135641 -248552213 - MLT1C LTR MaLR -3 464 403 711 170 0 0 chr2 2135641 2135747 -248552107 + U6 snRNA snRNA 1 106 -1 1429 237 52 43 chr2 2135747 2136143 -248551711 - MLT1C LTR MaLR -64 403 1 2358 138 13 16 chr2 2136482 2136858 -248550996 - THE1C LTR MaLR 0 375 1 196 227 23 0 chr2 2136929 2136973 -248550881 - L2 LINE L2 -81 3191 3147 336 225 67 11 chr2 2137358 2137447 -248550407 - MLT1C LTR MaLR 0 467 374 3001 96 0 10 chr2 2138804 2139212 -248548642 + MLT2A1 LTR ERVL 1 404 -40 186 273 64 36 chr2 2139342 2139452 -248548402 + L2 LINE L2 2179 2291 -1023 244 337 23 12 chr2 2139992 2140078 -248547776 - MER5B DNA MER1_type -80 98 12 3409 114 7 0 chr2 2140124 2140573 -248547281 - MLT2A2 LTR ERVL -1 452 1 365 85 0 0 chr2 2141298 2141345 -248546509 - Alu SINE Alu -252 47 1 2551 118 0 3 chr2 2141603 2141958 -248545896 - THE1B LTR MaLR 0 364 11 262 308 34 51 chr2 2142460 2142577 -248545277 - MIR SINE MIR -100 162 48 449 386 55 48 chr2 2145937 2146336 -248541518 + L2 LINE L2 2870 3271 -1 837 183 109 45 chr2 2146667 2146869 -248540985 + MSTD LTR MaLR 1 215 -181 500 223 0 0 chr2 2146912 2147006 -248540848 + MSTD LTR MaLR 303 396 0 190 268 26 72 chr2 2147700 2147853 -248540001 + L2 LINE L2 2279 2424 -890 811 213 12 0 chr2 2148747 2148907 -248538947 + FRAM SINE Alu 1 159 -17 31 0 0 0 chr2 2149090 2149121 -248538733 + AT_rich Low_complexity Low_complexity 1 31 0 271 299 0 0 chr2 2149303 2149380 -248538474 + L1ME1 LINE L1 4522 4598 -1548 * 2744 261 31 27 chr2 2149376 2150731 -248537123 + L1ME1 LINE L1 4801 6162 -4 963 145 0 0 chr2 2150739 2150911 -248536943 + (TA)n Simple_repeat Simple_repeat 1 172 0 2049 151 53 34 chr2 2150935 2151292 -248536562 - THE1B LTR MaLR 0 364 1 5311 133 14 5 chr2 2351318 2352176 -248335678 + Tigger1 DNA MER2_type 1553 2418 0 195 237 0 0 chr2 2354129 2354167 -248333687 + L2 LINE L2 3211 3248 -24 272 250 13 26 chr2 2357421 2357497 -248330357 + MLT1J LTR MaLR 423 497 -14 2334 81 20 0 chr2 2362404 2362702 -248325152 - AluSq SINE Alu -9 304 1 207 0 50 50 chr2 2363241 2363281 -248324573 + (CAAAAA)n Simple_repeat Simple_repeat 3 42 0 254 193 48 0 chr2 2363454 2363537 -248324317 + (CA)n Simple_repeat Simple_repeat 1 87 0 2699 58 0 0 chr2 2365045 2365356 -248322498 + AluY SINE Alu 1 311 0 263 292 23 29 chr2 2366225 2366396 -248321458 - L1ME4a LINE L1 -25 6096 5927 2155 115 16 3 chr2 2368144 2368448 -248319406 - AluSg SINE Alu -2 308 1 278 336 9 0 chr2 2371939 2372055 -248315799 + (CA)n Simple_repeat Simple_repeat 2 118 0 288 309 138 13 chr2 2372624 2372922 -248314932 + L2 LINE L2 2622 2956 -358 210 326 11 11 chr2 2373103 2373195 -248314659 + L2 LINE L2 3187 3278 -35 333 0 0 0 chr2 2374185 2374222 -248313632 + (TG)n Simple_repeat Simple_repeat 2 38 0 262 157 41 41 chr2 2376275 2376447 -248311407 + (CA)n Simple_repeat Simple_repeat 1 172 0 387 131 38 46 chr2 2376548 2376796 -248311058 + (CA)n Simple_repeat Simple_repeat 1 245 0 194 157 22 52 chr2 2377072 2377206 -248310648 + (CA)n Simple_repeat Simple_repeat 2 131 0 308 133 54 24 chr2 2377267 2377433 -248310421 + (CA)n Simple_repeat Simple_repeat 2 172 0 252 351 55 20 chr2 2377542 2377744 -248310110 + L2 LINE L2 1834 2042 -1272 594 0 0 0 chr2 2379282 2379348 -248308506 + (TC)n Simple_repeat Simple_repeat 2 67 0 246 394 42 13 chr2 2388133 2388369 -248299485 + L1MC4a LINE L1 5385 5627 -2181 1573 92 29 103 chr2 2388381 2388730 -248299124 + L1PA8 LINE L1 3104 3426 -2720 8211 93 6 3 chr2 2388730 2390730 -248297124 + L1PA8 LINE L1 4164 6166 -6 2011 123 14 0 chr2 2390813 2391089 -248296765 + AluSx SINE Alu 1 280 -32 207 0 0 0 chr2 2391089 2391112 -248296742 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 752 273 113 10 chr2 2391147 2391440 -248296414 + MER46C DNA MER2_type 1 323 -15 308 259 6 84 chr2 2391452 2391618 -248296236 + L1MC4a LINE L1 5713 5865 -1943 22 35 0 0 chr2 2391798 2391827 -248296027 + AT_rich Low_complexity Low_complexity 1 29 0 331 289 114 24 chr2 2392596 2392928 -248294926 + L1M4 LINE L1 2120 2481 -3665 1137 272 15 9 chr2 2393013 2393348 -248294506 - MER58B DNA MER1_type 0 341 5 562 304 39 5 chr2 2394383 2394587 -248293267 + Charlie8 DNA MER1_type 27 237 -2180 837 209 0 0 chr2 2395464 2395617 -248292237 - FRAM SINE Alu -12 164 12 229 262 159 37 chr2 2396540 2396647 -248291207 + MIR3 SINE MIR 39 158 -50 412 262 0 0 chr2 2399625 2399728 -248288126 + L1MB8 LINE L1 6076 6178 0 574 154 34 0 chr2 2400328 2400477 -248287377 + (TG)n Simple_repeat Simple_repeat 2 155 0 355 186 40 23 chr2 2400528 2400705 -248287149 + (TG)n Simple_repeat Simple_repeat 1 180 0 507 177 37 0 chr2 2400749 2400913 -248286941 + (TG)n Simple_repeat Simple_repeat 2 171 0 275 184 29 10 chr2 2400936 2401039 -248286815 + (TG)n Simple_repeat Simple_repeat 2 106 0 539 172 44 0 chr2 2401062 2401409 -248286445 + (TG)n Simple_repeat Simple_repeat 1 362 0 1992 121 32 24 chr2 2402360 2402700 -248285154 + MER61A LTR ERV1 1 343 0 2251 97 3 0 chr2 2403920 2404210 -248283644 + AluSq SINE Alu 1 291 -22 1508 139 15 120 chr2 2404362 2404686 -248283168 + AluJb SINE Alu 1 290 -12 196 294 134 8 chr2 2407077 2407196 -248280658 - MIR3 SINE MIR -54 154 21 471 317 87 0 chr2 2409504 2409687 -248278167 + MER58B DNA MER1_type 92 290 -51 227 231 192 46 chr2 2410408 2410538 -248277316 + MIR SINE MIR 113 261 -1 2232 124 0 3 chr2 2410763 2411062 -248276792 + AluSq SINE Alu 1 298 -15 207 0 0 0 chr2 2411911 2411934 -248275920 + (A)n Simple_repeat Simple_repeat 1 23 0 1119 72 0 0 chr2 2412225 2412377 -248275477 + L1PA8 LINE L1 6017 6168 -4 21 0 0 0 chr2 2412438 2412459 -248275395 + AT_rich Low_complexity Low_complexity 1 21 0 364 177 0 0 chr2 2415422 2415484 -248272370 + MLT1A2 LTR MaLR 4 65 -402 619 239 95 23 chr2 2417290 2417553 -248270301 + MER33 DNA MER1_type 43 324 0 527 233 47 31 chr2 2417689 2417882 -248269972 + L1ME LINE L1 815 1010 -5060 700 224 33 0 chr2 2418298 2418450 -248269404 + MER5A DNA MER1_type 33 189 0 234 307 24 87 chr2 2419785 2419912 -248267942 - MIR SINE MIR -57 151 33 240 271 0 57 chr2 2420374 2420444 -248267410 - MIR3 SINE MIR 0 208 143 2290 84 3 3 chr2 2420688 2420972 -248266882 + AluSq SINE Alu 1 284 -29 207 0 0 0 chr2 2420975 2420998 -248266856 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2334 111 0 0 chr2 2421315 2421622 -248266232 - AluSx SINE Alu -5 307 1 2006 106 0 4 chr2 2421885 2422150 -248265704 + AluSx SINE Alu 34 297 -15 1112 234 42 28 chr2 2422956 2423315 -248264539 + MLT1A1 LTR MaLR 2 365 0 1280 171 33 4 chr2 2423740 2423870 -248263984 - MER4A LTR ERV1 0 664 549 1949 91 12 4 chr2 2423870 2424161 -248263693 - AluSx SINE Alu 0 319 27 1280 171 33 4 chr2 2424161 2424278 -248263576 - MER4A LTR ERV1 -115 549 437 431 145 28 45 chr2 2425379 2425524 -248262330 - MER4A LTR ERV1 -203 461 261 601 141 0 10 chr2 2425524 2425623 -248262231 - MER4A LTR ERV1 -566 98 1 953 242 28 32 chr2 2430403 2430688 -248257166 + MLT1A2 LTR MaLR 62 345 -29 365 319 30 15 chr2 2430788 2430923 -248256931 - L1MC/D LINE L1 -2060 5748 5612 222 237 0 54 chr2 2431215 2431401 -248256453 + (CCA)n Simple_repeat Simple_repeat 2 177 0 410 214 0 33 chr2 2431437 2431619 -248256235 + (CCA)n Simple_repeat Simple_repeat 2 177 0 308 102 25 146 chr2 2431662 2432022 -248255832 + (CCCA)n Simple_repeat Simple_repeat 1 316 0 * 351 211 0 49 chr2 2431702 2432078 -248255776 + (CCA)n Simple_repeat Simple_repeat 1 357 0 345 194 0 54 chr2 2432193 2432379 -248255475 + (CCA)n Simple_repeat Simple_repeat 2 177 0 2347 88 3 3 chr2 2433446 2433743 -248254111 - AluSq SINE Alu -16 297 1 696 263 59 4 chr2 2435316 2435552 -248252302 - MER58 DNA MER1_type -2153 267 19 308 299 13 44 chr2 2436747 2436874 -248250980 + MIR SINE MIR 27 138 -124 2421 112 0 0 chr2 2436874 2437186 -248250668 + AluSx SINE Alu 1 312 0 308 299 13 44 chr2 2437186 2437256 -248250598 + MIR SINE MIR 138 209 -53 205 292 56 22 chr2 2437560 2437649 -248250205 - MIR3 SINE MIR -50 158 67 371 263 5 58 chr2 2438472 2438857 -248248997 + (CCAA)n Simple_repeat Simple_repeat 1 364 0 212 223 27 47 chr2 2438879 2439027 -248248827 + (CTACT)n Simple_repeat Simple_repeat 1 145 0 219 217 108 36 chr2 2439129 2439295 -248248559 + (CCCTA)n Simple_repeat Simple_repeat 1 178 0 365 102 17 0 chr2 2440535 2440594 -248247260 + (TG)n Simple_repeat Simple_repeat 1 60 0 715 201 5 9 chr2 2440596 2441152 -248246702 + GA-rich Low_complexity Low_complexity 1 554 0 255 169 46 15 chr2 2441181 2441246 -248246608 - MLT2D LTR ERVL -50 364 298 351 202 0 0 chr2 2441332 2441431 -248246423 + CT-rich Low_complexity Low_complexity 1 99 0 227 208 0 0 chr2 2441431 2441444 -248246410 + MLT2C2 LTR ERVL 408 420 -44 282 56 0 0 chr2 2441444 2441480 -248246374 + (CA)n Simple_repeat Simple_repeat 1 36 0 227 208 0 0 chr2 2441480 2441519 -248246335 + MLT2C2 LTR ERVL 419 460 -4 1216 220 11 11 chr2 2441631 2441917 -248245937 - MLT2D LTR ERVL -128 286 1 2121 46 85 0 chr2 2442274 2442557 -248245297 + AluY SINE Alu 1 305 0 297 295 101 22 chr2 2443130 2443269 -248244585 + MER105 DNA DNA 55 204 0 643 225 6 17 chr2 2443632 2443997 -248243857 + (TGGA)n Simple_repeat Simple_repeat 1 360 0 806 209 3 15 chr2 2444020 2444434 -248243420 + (TGGA)n Simple_repeat Simple_repeat 1 408 0 3041 198 16 7 chr2 2445327 2446003 -248241851 - L1 LINE L1 -1242 4904 4223 7424 23 0 1 chr2 2446028 2447312 -248240542 + L1PA3 LINE L1 4873 6155 0 997 160 21 46 chr2 2447316 2447554 -248240300 - L1 LINE L1 -795 5351 5120 2029 148 3 10 chr2 2448652 2448957 -248238897 - AluJb SINE Alu -9 303 1 1402 275 100 29 chr2 2449140 2449689 -248238165 - MER82 DNA MER2_type -60 593 6 543 304 61 101 chr2 2450250 2450279 -248237575 + L1ME4a LINE L1 5589 5618 -503 1105 72 0 13 chr2 2450279 2450431 -248237423 + L1PB1 LINE L1 5995 6144 -7 543 304 61 101 chr2 2450431 2450944 -248236910 + L1ME4a LINE L1 5618 6109 -12 252 0 0 0 chr2 2451872 2451900 -248235954 + (CA)n Simple_repeat Simple_repeat 1 28 0 2710 261 124 55 chr2 2452735 2454177 -248233677 + L1MEc LINE L1 35 1628 -4768 2382 97 0 7 chr2 2454177 2454487 -248233367 + AluSx SINE Alu 1 308 -4 2710 261 124 55 chr2 2454487 2454846 -248233008 + L1MEc LINE L1 1628 1961 -4435 12052 136 60 17 chr2 2454846 2455306 -248232548 - Tigger1 DNA MER2_type -5 2413 1974 2283 121 0 0 chr2 2455306 2455611 -248232243 + AluSc SINE Alu 1 305 -4 12052 136 60 17 chr2 2455611 2457263 -248230591 - Tigger1 DNA MER2_type -444 1974 210 898 154 4 150 chr2 2457269 2457503 -248230351 + AluJo SINE Alu 13 212 -100 2335 98 3 0 chr2 2458258 2458554 -248229300 - AluSx SINE Alu -11 301 5 1933 143 10 3 chr2 2459272 2459566 -248228288 - AluSx SINE Alu -16 296 1 229 318 36 55 chr2 2461430 2461540 -248226314 + L2 LINE L2 3145 3252 -20 654 142 0 28 chr2 2464324 2464465 -248223389 + (GGA)n Simple_repeat Simple_repeat 1 137 0 218 382 0 0 chr2 2464486 2464651 -248223203 + G-rich Low_complexity Low_complexity 1 165 0 21 57 0 0 chr2 2464929 2464964 -248222890 + GC_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 2465228 2465249 -248222605 + GC_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 2465262 2465283 -248222571 + GC_rich Low_complexity Low_complexity 1 21 0 180 261 0 0 chr2 2465574 2465620 -248222234 - MIR SINE MIR -10 252 207 308 267 125 17 chr2 2466393 2466513 -248221341 - MLT1F1 LTR MaLR -264 303 171 607 299 95 79 chr2 2468721 2469406 -248218448 - MER21B LTR ERV1 -147 716 21 225 287 23 11 chr2 2469602 2469689 -248218165 + L2 LINE L2 2271 2358 -956 1005 207 50 1 chr2 2470879 2471121 -248216733 + MLT2C1 LTR ERVL 61 343 -54 195 250 0 0 chr2 2471121 2471205 -248216649 + (TCCA)n Simple_repeat Simple_repeat 2 85 0 226 297 0 0 chr2 2471205 2471269 -248216585 + CT-rich Low_complexity Low_complexity 1 64 0 745 209 0 0 chr2 2473117 2473246 -248214608 + FLAM_C SINE Alu 1 129 -4 1844 179 74 60 chr2 2473493 2473928 -248213926 + MER41B LTR ERV1 105 384 -94 2377 95 3 0 chr2 2473928 2474222 -248213632 - AluSx SINE Alu -17 295 1 1844 179 74 60 chr2 2474222 2474310 -248213544 + MER41B LTR ERV1 384 469 -9 31 0 0 0 chr2 2474403 2474434 -248213420 + AT_rich Low_complexity Low_complexity 1 31 0 219 301 42 49 chr2 2474441 2474584 -248213270 - MIR SINE MIR -75 187 46 252 277 145 0 chr2 2475290 2475373 -248212481 + MIR SINE MIR 52 146 -62 198 282 214 8 chr2 2477014 2477131 -248210723 - MER5A DNA MER1_type -23 166 26 252 205 0 108 chr2 2477138 2477221 -248210633 - MER66A LTR ERV1 -13 465 392 2418 96 0 0 chr2 2477256 2477568 -248210286 + AluSx SINE Alu 1 312 0 21 0 0 0 chr2 2477612 2477633 -248210221 + AT_rich Low_complexity Low_complexity 1 21 0 2186 109 7 3 chr2 2477642 2477964 -248209890 + AluSq SINE Alu 1 313 0 322 262 91 9 chr2 2478809 2478923 -248208931 + MIR SINE MIR 30 151 -63 3338 170 25 47 chr2 2479584 2480369 -248207485 - pTR5 LTR ERV1 -730 1708 743 726 82 0 0 chr2 2480369 2480466 -248207388 - MER4B LTR ERV1 -96 514 418 39671 64 9 3 chr2 2480469 2486544 -248201310 + L1PA5 LINE L1 11 6124 -30 653 144 8 44 chr2 2486544 2486745 -248201109 - MER4A LTR ERV1 -173 593 264 521 146 31 10 chr2 2486748 2486844 -248201010 - MER4A LTR ERV1 -566 98 1 337 313 45 8 chr2 2486845 2486979 -248200875 + MLT1C LTR MaLR 43 181 -286 573 211 0 64 chr2 2487957 2488113 -248199741 + MER77 LTR ERV1 62 207 -398 228 261 35 78 chr2 2488333 2488448 -248199406 - MER5A DNA MER1_type 0 189 80 272 303 18 37 chr2 2488820 2488954 -248198900 - MIR SINE MIR -53 155 24 1750 176 0 29 chr2 2489070 2489376 -248198478 + AluJo SINE Alu 1 297 -15 2413 53 3 3 chr2 2489388 2489699 -248198155 + AluY SINE Alu 1 311 0 968 189 6 0 chr2 2489699 2489858 -248197996 + AluJo/FRAM SINE Alu 135 294 -18 721 247 52 51 chr2 2491808 2492210 -248195644 - MER67C LTR ERV1 -1 709 119 1037 134 21 5 chr2 2494380 2494566 -248193288 - MER65A LTR ERV1 -4 441 253 1584 216 71 0 chr2 2494568 2494933 -248192921 + MER57A LTR ERV1 3 393 -10 1254 188 4 16 chr2 2494950 2495206 -248192648 - MER65A LTR ERV1 -189 256 4 3435 131 15 71 chr2 2495485 2495835 -248192019 - MER41B LTR ERV1 0 635 340 756 188 0 0 chr2 2495835 2495968 -248191886 + FLAM_C SINE Alu 1 133 0 3435 131 15 71 chr2 2495968 2496290 -248191564 - MER41B LTR ERV1 -295 340 1 2368 110 0 0 chr2 2496594 2496894 -248190960 - AluSx SINE Alu -12 300 1 2146 117 3 0 chr2 2497118 2497408 -248190446 - AluSg SINE Alu -19 291 1 366 247 99 99 chr2 2497659 2497983 -248189871 - MER34C LTR ERV1 -3 582 259 639 261 0 6 chr2 2498071 2498228 -248189626 - MER34C LTR ERV1 -385 200 45 1480 176 53 7 chr2 2498397 2498681 -248189173 + MER57A LTR ERV1 107 403 0 258 250 33 58 chr2 2499135 2499255 -248188599 - LTR23 LTR ERV1 0 437 321 31 0 0 0 chr2 2499358 2499389 -248188465 + AT_rich Low_complexity Low_complexity 1 31 0 484 45 0 15 chr2 2499389 2499456 -248188398 - L1PA4 LINE L1 -3 6152 6087 403 52 0 0 chr2 2499456 2499514 -248188340 + L1PA2 LINE L1 5989 6046 -109 1235 199 77 3 chr2 2499515 2499827 -248188027 - LTR56 LTR ERV1 -110 335 1 383 206 178 9 chr2 2499827 2499933 -248187921 + MER34C LTR ERV1 115 238 -347 361 182 63 6 chr2 2499973 2500192 -248187662 + (CAG)n Simple_repeat Simple_repeat 1 231 0 311 172 63 29 chr2 2500326 2500500 -248187354 + (CAG)n Simple_repeat Simple_repeat 1 180 0 316 190 58 23 chr2 2500704 2500878 -248186976 + (CAG)n Simple_repeat Simple_repeat 1 180 0 383 254 66 104 chr2 2501385 2501672 -248186182 + MER34C LTR ERV1 310 585 0 186 350 60 0 chr2 2502246 2502346 -248185508 + MIR SINE MIR 59 164 -98 1318 240 122 22 chr2 2502353 2502651 -248185203 + MER39 LTR ERV1 1 268 -439 1565 263 142 12 chr2 2502651 2503221 -248184633 - LTR48B LTR ERV1 0 644 1 1318 240 122 22 chr2 2503221 2503513 -248184341 + MER39 LTR ERV1 268 691 -16 557 254 117 0 chr2 2503517 2503714 -248184140 - MER31A LTR ERV1 -249 236 17 2098 115 3 0 chr2 2503793 2504089 -248183765 - AluSx SINE Alu -13 299 3 1549 266 72 13 chr2 2504565 2505092 -248182762 + MER89 LTR ERV1 1 558 -1 439 83 0 0 chr2 2506816 2506876 -248180978 - MER4C LTR ERV1 0 465 406 5183 114 31 9 chr2 2506877 2507223 -248180631 + MER4E LTR ERV1 1 338 -441 1988 123 10 7 chr2 2507223 2507531 -248180323 + AluSg SINE Alu 1 309 -1 5183 114 31 9 chr2 2507531 2507946 -248179908 + MER4E LTR ERV1 338 779 0 368 306 78 29 chr2 2507965 2508250 -248179604 - L1ME4a LINE L1 -225 5896 5549 183 129 0 0 chr2 2510451 2510482 -248177372 + (TA)n Simple_repeat Simple_repeat 2 32 0 25 0 0 0 chr2 2510709 2510734 -248177120 + AT_rich Low_complexity Low_complexity 1 25 0 195 114 0 0 chr2 2511959 2511994 -248175860 + (TG)n Simple_repeat Simple_repeat 2 36 0 2316 103 0 0 chr2 2513088 2513400 -248174454 + AluSx SINE Alu 1 312 0 681 266 153 35 chr2 2516459 2516741 -248171113 + MER58B DNA MER1_type 27 341 0 1928 46 13 0 chr2 2517781 2518020 -248169834 - AluY SINE Alu -69 242 1 180 356 82 7 chr2 2519966 2520101 -248167753 + L3b LINE CR1 1291 1435 -148 2221 110 40 35 chr2 2520223 2520595 -248167259 + THE1C LTR MaLR 1 374 -1 242 340 43 0 chr2 2521148 2521242 -248166612 + MIR SINE MIR 86 183 -79 1024 113 69 13 chr2 2573214 2573373 -248114481 - AluSx SINE Alu -16 296 129 421 121 24 12 chr2 2573373 2573456 -248114398 + CT-rich Low_complexity Low_complexity 1 84 0 925 114 15 8 chr2 2573456 2573588 -248114266 - AluSx SINE Alu -180 133 1 1426 164 0 5 chr2 2575109 2575323 -248112531 + AluJb SINE Alu 2 214 -98 234 150 0 0 chr2 2575355 2575395 -248112459 + (GAAAA)n Simple_repeat Simple_repeat 4 43 0 725 145 5 43 chr2 2575395 2575581 -248112273 + GA-rich Low_complexity Low_complexity 2 180 0 641 130 0 68 chr2 2575553 2575745 -248112109 + (GGAA)n Simple_repeat Simple_repeat 1 179 0 * 619 175 9 38 chr2 2575707 2575947 -248111907 + GA-rich Low_complexity Low_complexity 1 232 0 * 735 159 6 28 chr2 2576876 2577058 -248110796 + (TCTA)n Simple_repeat Simple_repeat 1 178 0 341 308 67 51 chr2 2577058 2577311 -248110543 - L1MEd LINE L1 -4903 1216 960 1017 43 12 24 chr2 2577334 2577498 -248110356 + (TCTA)n Simple_repeat Simple_repeat 3 164 0 1173 154 13 44 chr2 2578106 2578333 -248109521 - L1PB2 LINE L1 -8 6143 5924 396 92 67 17 chr2 2578390 2578510 -248109344 + (TCTA)n Simple_repeat Simple_repeat 4 129 0 227 342 70 27 chr2 2580326 2580513 -248107341 + L2 LINE L2 2905 3099 -173 323 305 24 54 chr2 2581096 2581263 -248106591 - MIR3 SINE MIR -15 193 32 735 158 38 0 chr2 2582013 2582146 -248105708 + L1PB4 LINE L1 6019 6156 0 405 206 109 0 chr2 2582555 2582647 -248105207 - Tigger1 DNA MER2_type 0 2418 2317 1159 206 25 4 chr2 2582649 2582925 -248104929 + L1MA4 LINE L1 6012 6293 -7 13293 138 42 4 chr2 2583144 2585345 -248102509 - Tigger1 DNA MER2_type -134 2284 1 278 297 71 34 chr2 2587353 2587619 -248100235 + L1ME4a LINE L1 5622 5897 -224 367 73 18 0 chr2 2587842 2587897 -248099957 - L1PB3 LINE L1 -3 6151 6096 361 189 301 35 chr2 2590250 2590393 -248097461 - MER5A DNA MER1_type -4 185 5 234 234 16 0 chr2 2590729 2590793 -248097061 + MLT1L LTR MaLR 550 614 -1 185 259 93 0 chr2 2593651 2593705 -248094149 - MIR SINE MIR -87 175 117 4532 176 26 6 chr2 2593795 2595566 -248092288 + L1PA16 LINE L1 4326 6166 0 22 56 0 0 chr2 2595890 2595926 -248091928 + AT_rich Low_complexity Low_complexity 1 36 0 2333 119 3 0 chr2 2596203 2596514 -248091340 - AluSx SINE Alu 0 312 1 627 351 39 0 chr2 2597899 2598204 -248089650 - MER58B DNA MER1_type 0 341 25 263 183 28 0 chr2 2598570 2598641 -248089213 + (CAGA)n Simple_repeat Simple_repeat 3 75 0 2365 64 0 0 chr2 2599054 2599350 -248088504 - AluY SINE Alu -15 296 1 294 184 105 26 chr2 2599402 2599478 -248088376 + L1PB4 LINE L1 6070 6151 -5 362 191 0 0 chr2 2600471 2600534 -248087320 - AluSx SINE Alu -5 297 235 1239 131 0 0 chr2 2600536 2600711 -248087143 - AluSx SINE Alu -137 175 1 25 0 0 0 chr2 2600894 2600919 -248086935 + AT_rich Low_complexity Low_complexity 1 25 0 419 243 30 65 chr2 2601229 2601398 -248086456 - MER5B DNA MER1_type -10 168 6 291 114 0 0 chr2 2602678 2602722 -248085132 + (TG)n Simple_repeat Simple_repeat 2 45 0 910 238 94 20 chr2 2602759 2603100 -248084754 - L1MD3 LINE L1 -8 7987 7622 1973 127 0 10 chr2 2603114 2603422 -248084432 - AluSx SINE Alu -7 305 1 839 128 6 70 chr2 2603480 2603549 -248084305 - AluSx SINE Alu -109 203 131 1915 68 0 12 chr2 2603549 2603797 -248084057 - AluY SINE Alu -16 295 51 839 128 6 70 chr2 2603797 2603883 -248083971 - AluSx SINE Alu -181 131 58 2098 99 7 0 chr2 2604110 2604403 -248083451 - AluSq SINE Alu -16 297 3 1705 144 0 75 chr2 2605547 2605668 -248082186 + AluJo SINE Alu 1 129 -183 180 0 0 0 chr2 2605668 2605688 -248082166 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1705 144 0 75 chr2 2605688 2605900 -248081954 + AluJo SINE Alu 129 309 -3 22 0 0 0 chr2 2607691 2607713 -248080141 + AT_rich Low_complexity Low_complexity 1 22 0 772 176 0 22 chr2 2607870 2608006 -248079848 - AluJb SINE Alu -11 301 169 329 379 38 17 chr2 2608007 2608242 -248079612 + L1ME4a LINE L1 5653 5892 -229 195 316 63 25 chr2 2608408 2608487 -248079367 + MIR SINE MIR 84 165 -97 22 35 0 0 chr2 2611380 2611409 -248076445 + AT_rich Low_complexity Low_complexity 1 29 0 2246 93 0 7 chr2 2612727 2613037 -248074817 + AluSg SINE Alu 3 310 0 182 333 76 31 chr2 2613287 2613641 -248074213 + L2 LINE L2 2257 2626 -688 297 284 115 34 chr2 2614302 2614451 -248073403 - MIR3 SINE MIR -51 157 44 434 216 128 24 chr2 2615600 2615725 -248072129 - MIR3 SINE MIR -26 182 45 207 226 19 0 chr2 2618085 2618138 -248069716 + (CAAA)n Simple_repeat Simple_repeat 2 55 0 198 91 0 0 chr2 2618462 2618495 -248069359 + (TTTAA)n Simple_repeat Simple_repeat 3 35 0 1777 45 45 0 chr2 2618495 2618718 -248069136 - AluY SINE Alu -27 284 52 187 70 116 0 chr2 2619046 2619089 -248068765 + A-rich Low_complexity Low_complexity 3 50 0 242 215 13 38 chr2 2620162 2620241 -248067613 + (CATATA)n Simple_repeat Simple_repeat 4 80 0 21 0 0 0 chr2 2620309 2620330 -248067524 + AT_rich Low_complexity Low_complexity 1 21 0 185 128 0 26 chr2 2622019 2622058 -248065796 + (GAAAA)n Simple_repeat Simple_repeat 3 40 0 1738 139 85 0 chr2 2625309 2625590 -248062264 - AluSx SINE Alu -7 305 1 1670 154 49 0 chr2 2626706 2626991 -248060863 - AluJb SINE Alu -13 299 1 231 311 78 0 chr2 2628485 2628575 -248059279 - MIR3 SINE MIR -16 192 96 643 123 61 0 chr2 2629526 2629640 -248058214 - L1PA15 LINE L1 -7 6158 6038 625 281 144 22 chr2 2631238 2631598 -248056256 - L2 LINE L2 -62 3251 2848 398 249 67 61 chr2 2632508 2632673 -248055181 + MER3 DNA MER1_type 40 205 -4 2414 53 3 0 chr2 2632720 2633023 -248054831 - AluY SINE Alu -7 304 1 222 214 29 14 chr2 2633036 2633106 -248054748 + (TA)n Simple_repeat Simple_repeat 2 72 0 213 139 0 0 chr2 2633408 2633451 -248054403 + (TC)n Simple_repeat Simple_repeat 2 44 0 387 0 0 0 chr2 2633478 2633521 -248054333 + (CA)n Simple_repeat Simple_repeat 2 44 0 297 230 107 89 chr2 2634302 2634476 -248053378 - MIR SINE MIR -50 212 36 1996 126 0 13 chr2 2634671 2634973 -248052881 - AluSp SINE Alu -15 298 1 197 239 65 98 chr2 2637433 2637525 -248050329 + MIR SINE MIR 117 205 -57 311 326 61 15 chr2 2640386 2640518 -248047336 + L1MC4 LINE L1 6582 6719 -1323 * 326 300 0 55 chr2 2640455 2640565 -248047289 - L1MC4 LINE L1 -1340 6702 6599 234 62 0 0 chr2 2640910 2640942 -248046912 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 576 184 0 0 chr2 2641736 2641883 -248045971 + CT-rich Low_complexity Low_complexity 1 147 0 207 179 0 0 chr2 2641909 2641948 -248045906 + CT-rich Low_complexity Low_complexity 2 40 0 25 75 0 0 chr2 2642480 2642533 -248045321 + AT_rich Low_complexity Low_complexity 1 53 0 1333 87 108 0 chr2 2642852 2643047 -248044807 - L1PA5 LINE L1 0 6154 5939 243 250 66 26 chr2 2643524 2643600 -248044254 + L2 LINE L2 3235 3313 0 352 303 61 36 chr2 2644315 2644480 -248043374 + MIR SINE MIR 86 254 -8 3334 106 42 15 chr2 2644711 2645191 -248042663 + MER1A DNA MER1_type 37 529 0 353 267 95 9 chr2 2645240 2645356 -248042498 + MIR3 SINE MIR 69 194 -14 464 277 85 43 chr2 2648750 2648938 -248038916 - MIR SINE MIR -2 260 65 254 294 50 89 chr2 2648917 2649097 -248038757 + MIR SINE MIR 79 251 -11 * 182 122 0 41 chr2 2649255 2649304 -248038550 + (CAGAGA)n Simple_repeat Simple_repeat 5 51 0 218 226 16 0 chr2 2649356 2649418 -248038436 + (CAGAGA)n Simple_repeat Simple_repeat 3 65 0 191 360 10 10 chr2 2649565 2649665 -248038189 - L2 LINE L2 -600 2714 2615 200 290 81 0 chr2 2650377 2650439 -248037415 + MIR SINE MIR 82 148 -60 30 59 0 0 chr2 2650760 2650811 -248037043 + AT_rich Low_complexity Low_complexity 1 51 0 186 43 0 0 chr2 2651437 2651460 -248036394 + (TTCC)n Simple_repeat Simple_repeat 1 23 0 813 133 7 46 chr2 2652731 2652882 -248034972 + FRAM SINE Alu 22 166 -10 2394 83 0 6 chr2 2653125 2653439 -248034415 + AluSx SINE Alu 1 312 0 1004 112 0 0 chr2 2657123 2657257 -248030597 + AluSq/x SINE Alu 1 134 -178 2014 128 0 0 chr2 2657260 2657549 -248030305 + AluSx SINE Alu 3 291 -21 2186 98 0 0 chr2 2658036 2658332 -248029522 + AluSx SINE Alu 1 296 -16 295 366 9 18 chr2 2658562 2658674 -248029180 - MIR3 SINE MIR -52 156 46 1203 124 0 0 chr2 2659176 2659361 -248028493 + L1MA2 LINE L1 6120 6304 0 290 143 44 0 chr2 2661832 2661923 -248025931 + (TA)n Simple_repeat Simple_repeat 2 96 0 267 130 29 14 chr2 2661952 2662021 -248025833 + (TA)n Simple_repeat Simple_repeat 1 70 0 349 333 42 0 chr2 2662250 2662370 -248025484 - MIR SINE MIR -50 212 88 186 43 0 0 chr2 2663165 2663188 -248024666 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 358 306 20 61 chr2 2664172 2664368 -248023486 - L2 LINE L2 -208 3064 2877 195 380 0 0 chr2 2664931 2665010 -248022844 + MIR SINE MIR 172 250 -12 21 0 0 0 chr2 2665625 2665646 -248022208 + AT_rich Low_complexity Low_complexity 1 21 0 1252 181 104 4 chr2 2665913 2666173 -248021681 - AluJo SINE Alu -26 286 1 2397 73 0 0 chr2 2666182 2666485 -248021369 - AluY SINE Alu -8 303 1 221 240 20 0 chr2 2667759 2667809 -248020045 + L2 LINE L2 3222 3272 0 228 122 0 0 chr2 2668987 2669028 -248018826 + (T)n Simple_repeat Simple_repeat 1 41 0 232 316 124 28 chr2 2670239 2670416 -248017438 + MIR SINE MIR 42 235 -27 581 126 0 0 chr2 2670418 2670505 -248017349 - AluJ/FLAM SINE Alu -225 87 1 218 333 0 0 chr2 2671122 2671182 -248016672 + L2 LINE L2 3205 3264 -8 2219 101 3 3 chr2 2671391 2671699 -248016155 + AluSq SINE Alu 1 308 -5 183 375 0 39 chr2 2671994 2672098 -248015756 + L2 LINE L2 3195 3294 -19 276 350 21 0 chr2 2672194 2672291 -248015563 + MIR SINE MIR 13 111 -151 1080 195 107 7 chr2 2672983 2673255 -248014599 - AluJb SINE Alu -13 299 1 5128 87 13 1 chr2 2674257 2674933 -248012921 + LTR8 LTR ERV1 8 691 0 310 317 7 7 chr2 2675130 2675272 -248012582 - L1ME4a LINE L1 -224 5897 5756 25 0 0 0 chr2 2676430 2676455 -248011399 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr2 2676548 2676570 -248011284 + AT_rich Low_complexity Low_complexity 1 22 0 385 283 76 7 chr2 2678898 2679059 -248008795 + MIR SINE MIR 3 167 -66 212 83 0 28 chr2 2680564 2680600 -248007254 + (GAAAA)n Simple_repeat Simple_repeat 1 35 0 180 307 120 0 chr2 2680992 2681067 -248006787 - L2 LINE L2 -5 3267 3184 22 35 0 0 chr2 2681211 2681240 -248006614 + AT_rich Low_complexity Low_complexity 1 29 0 354 305 48 45 chr2 2682645 2683042 -248004812 - HAL1 LINE L1 -1047 1460 1063 261 327 106 0 chr2 2683254 2683367 -248004487 - MIR SINE MIR -79 183 59 273 323 62 73 chr2 2683620 2683880 -248003974 + MER112 DNA MER1_type 3 259 -1 1874 130 29 69 chr2 2684353 2684729 -248003125 + THE1C LTR MaLR 15 375 0 474 294 0 0 chr2 2685602 2685848 -248002006 + CT-rich Low_complexity Low_complexity 1 246 0 269 331 0 0 chr2 2685999 2686168 -248001686 + CT-rich Low_complexity Low_complexity 3 171 0 290 322 0 6 chr2 2686255 2686435 -248001419 + CT-rich Low_complexity Low_complexity 1 179 0 283 325 0 0 chr2 2686556 2686725 -248001129 + CT-rich Low_complexity Low_complexity 3 171 0 229 346 0 0 chr2 2686638 2686817 -248001037 + (CTTG)n Simple_repeat Simple_repeat 2 180 0 * 445 278 6 6 chr2 2687106 2687286 -248000568 + (CCTG)n Simple_repeat Simple_repeat 1 180 0 244 329 0 0 chr2 2687264 2687506 -248000348 + (CATG)n Simple_repeat Simple_repeat 1 242 0 * 2794 209 86 38 chr2 2687602 2687912 -247999942 - L1MA9 LINE L1 -38 6274 5980 2032 138 0 0 chr2 2687912 2688217 -247999637 - AluSx SINE Alu -5 307 3 2794 209 86 38 chr2 2688217 2688388 -247999466 - L1MA9 LINE L1 -332 5980 5819 180 0 0 0 chr2 2688388 2688408 -247999446 + (TA)n Simple_repeat Simple_repeat 2 21 0 2794 209 86 38 chr2 2688408 2688696 -247999158 - L1MA9 LINE L1 -493 5819 5467 906 118 105 0 chr2 2688696 2688849 -247999005 - MER4C LTR ERV1 0 465 297 * 1246 116 0 5 chr2 2688842 2689031 -247998823 - MER4C LTR ERV1 -277 188 1 6334 201 19 39 chr2 2689032 2689067 -247998787 - L1MA9 LINE L1 -714 5469 5435 3109 165 100 27 chr2 2689067 2689744 -247998110 + LTR8A LTR ERV1 1 727 0 6334 201 19 39 chr2 2689744 2691410 -247996444 - L1MA9 LINE L1 -748 5435 3808 2238 207 57 117 chr2 2692070 2692450 -247995404 + L1MB8 LINE L1 4700 5101 -1077 2031 110 0 43 chr2 2692450 2692776 -247995078 + AluSx SINE Alu 1 312 0 2238 207 57 117 chr2 2692776 2693895 -247993959 + L1MB8 LINE L1 5101 6097 -81 2138 232 44 13 chr2 2693901 2694422 -247993432 + MER44D DNA MER2_type 9 600 -5 424 127 42 0 chr2 2694430 2694501 -247993353 + L1MB7 LINE L1 6101 6174 -10 234 336 91 11 chr2 2697380 2697654 -247990200 - L2 LINE L2 -4 3309 3014 381 102 0 0 chr2 2698976 2699035 -247988819 + (TCCA)n Simple_repeat Simple_repeat 3 61 0 2613 105 8 3 chr2 2700381 2700742 -247987112 + THE1B LTR MaLR 2 364 0 1869 154 14 0 chr2 2701130 2701423 -247986431 - AluJb SINE Alu -15 297 1 2415 74 0 0 chr2 2702894 2703192 -247984662 + AluY SINE Alu 1 298 -13 939 158 7 0 chr2 2703833 2703985 -247983869 + MER50 LTR ERV1 452 604 -130 446 213 11 20 chr2 2705458 2705573 -247982281 - L1MA6 LINE L1 -147 6154 6042 235 298 193 9 chr2 2709996 2710110 -247977744 - L2 LINE L2 -1 3271 3137 2440 119 25 0 chr2 2710530 2710884 -247976970 - THE1B LTR MaLR 0 364 2 2109 104 0 0 chr2 2711361 2711658 -247976196 - AluY SINE Alu 0 312 16 246 291 39 39 chr2 2715273 2715376 -247972478 + MIR3 SINE MIR 13 115 -93 538 360 93 15 chr2 2717643 2718503 -247969351 + L2 LINE L2 2345 3272 -41 1979 140 10 0 chr2 2718644 2718944 -247968910 + AluSx SINE Alu 1 303 -9 227 350 26 43 chr2 2719077 2719194 -247968660 + L2 LINE L2 3072 3186 -86 960 174 0 0 chr2 2720417 2720572 -247967282 + FRAM SINE Alu 5 159 -7 23 33 0 0 chr2 2721956 2721986 -247965868 + AT_rich Low_complexity Low_complexity 1 30 0 1060 259 4 0 chr2 2723269 2723512 -247964342 + MER47B DNA MER2_type 175 418 0 389 335 71 8 chr2 2724149 2724388 -247963466 + L2 LINE L2 490 743 -2571 352 235 147 59 chr2 2727387 2727626 -247960228 - L1MC4a LINE L1 -165 5956 5695 249 316 89 48 chr2 2727631 2727799 -247960055 - MIR SINE MIR 0 262 88 229 217 142 9 chr2 2728094 2728200 -247959654 - L1MC4a LINE L1 -2408 5400 5281 422 312 0 32 chr2 2730569 2730694 -247957160 + MIR SINE MIR 10 130 -132 219 69 0 0 chr2 2730712 2730741 -247957113 + (TAGA)n Simple_repeat Simple_repeat 4 32 0 2126 134 36 36 chr2 2730744 2731102 -247956752 + THE1B LTR MaLR 7 364 0 202 216 0 0 chr2 2731104 2731141 -247956713 + (TATATG)n Simple_repeat Simple_repeat 4 40 0 247 220 60 70 chr2 2731141 2731241 -247956613 + MIR SINE MIR 152 250 -12 4028 195 69 24 chr2 2733039 2734590 -247953264 + L1MB3 LINE L1 4571 6177 -6 249 291 34 11 chr2 2735989 2736164 -247951690 + (AGATG)n Simple_repeat Simple_repeat 1 179 0 23 0 0 0 chr2 2736553 2736576 -247951278 + AT_rich Low_complexity Low_complexity 1 23 0 249 33 0 0 chr2 2737647 2737677 -247950177 + (TCCA)n Simple_repeat Simple_repeat 1 30 0 1037 205 122 42 chr2 2738098 2738434 -247949420 - L1MD2 LINE L1 -10 6349 5987 3183 226 51 10 chr2 2738726 2739610 -247948244 - L1MD2 LINE L1 -324 6035 5120 311 313 12 38 chr2 2739624 2739784 -247948070 + L2 LINE L2 3158 3313 0 352 118 40 26 chr2 2741820 2741896 -247945958 + C-rich Low_complexity Low_complexity 2 78 0 403 192 10 10 chr2 2741915 2742014 -247945840 + CT-rich Low_complexity Low_complexity 1 99 0 24 67 0 0 chr2 2742103 2742148 -247945706 + AT_rich Low_complexity Low_complexity 1 45 0 879 292 134 60 chr2 2742976 2744626 -247943228 - HAL1 LINE L1 -3 2504 732 2230 132 0 0 chr2 2744717 2745028 -247942826 + AluSq SINE Alu 1 311 -2 1592 179 11 7 chr2 2746092 2746377 -247941477 + AluJb SINE Alu 21 306 -6 29 0 0 0 chr2 2746445 2746474 -247941380 + AT_rich Low_complexity Low_complexity 1 29 0 420 20 0 0 chr2 2746979 2747028 -247940826 + (CA)n Simple_repeat Simple_repeat 2 50 0 238 274 12 24 chr2 2747423 2747507 -247940347 - MIR SINE MIR -25 237 155 233 315 47 24 chr2 2747547 2747674 -247940180 + MIR SINE MIR 62 191 -71 437 303 106 31 chr2 2747997 2748610 -247939244 + L1ME LINE L1 4366 5024 -1122 562 205 131 0 chr2 2748622 2748744 -247939110 + FLAM_C SINE Alu 6 143 0 343 275 118 26 chr2 2748750 2749186 -247938668 + L1ME LINE L1 5030 5506 -656 2583 191 19 56 chr2 2750639 2750841 -247937013 - MER44D DNA MER2_type -1882 605 397 2187 102 3 3 chr2 2750841 2751121 -247936733 + AluSx SINE Alu 1 283 -29 189 0 0 0 chr2 2751121 2751142 -247936712 + (CAAT)n Simple_repeat Simple_repeat 4 24 0 2187 102 3 3 chr2 2751142 2751156 -247936698 + AluSx SINE Alu 282 295 -17 2583 191 19 56 chr2 2751156 2751524 -247936330 - MER44D DNA MER2_type -2090 397 1 1201 200 136 4 chr2 2752085 2752350 -247935504 + AluJo SINE Alu 3 302 0 3319 87 20 0 chr2 2753450 2753909 -247933945 + L1PA13 LINE L1 5696 6163 0 2269 103 0 0 chr2 2753912 2754193 -247933661 + AluSp SINE Alu 1 281 -32 261 0 0 0 chr2 2754193 2754222 -247933632 + (CAAT)n Simple_repeat Simple_repeat 4 32 0 362 216 0 9 chr2 2757686 2757797 -247930057 + (CA)n Simple_repeat Simple_repeat 2 111 0 508 238 39 33 chr2 2759002 2759183 -247928671 + MIR SINE MIR 22 203 -59 514 219 182 0 chr2 2759387 2759574 -247928280 + L1MC5 LINE L1 7008 7228 -733 938 246 56 58 chr2 2759724 2760002 -247927852 + L1MC5 LINE L1 7304 7583 -378 2046 97 29 14 chr2 2760002 2760303 -247927551 + AluSx SINE Alu 1 305 0 938 246 56 58 chr2 2760303 2760539 -247927315 + L1MC5 LINE L1 7583 7818 -143 2400 65 0 40 chr2 2762511 2762834 -247925020 + AluY SINE Alu 1 310 -1 30 45 0 0 chr2 2763089 2763133 -247924721 + AT_rich Low_complexity Low_complexity 1 44 0 435 149 0 0 chr2 2764356 2764430 -247923424 + (CA)n Simple_repeat Simple_repeat 1 74 0 311 204 66 72 chr2 2764493 2764660 -247923194 - L1MC4 LINE L1 -188 7854 7689 27 100 0 0 chr2 2764937 2765027 -247922827 + AT_rich Low_complexity Low_complexity 1 90 0 212 297 0 14 chr2 2765195 2765269 -247922585 + CT-rich Low_complexity Low_complexity 4 76 0 280 295 114 0 chr2 2765538 2765643 -247922211 + MIR SINE MIR 24 140 -122 269 266 75 0 chr2 2765950 2766044 -247921810 - L1MC4a LINE L1 -1910 5898 5798 190 328 74 16 chr2 2766165 2766287 -247921567 - MIR SINE MIR -5 257 129 21 0 0 0 chr2 2767058 2767079 -247920775 + AT_rich Low_complexity Low_complexity 1 21 0 307 294 103 38 chr2 2768061 2768245 -247919609 - MIR SINE MIR -29 233 38 555 278 57 10 chr2 2769391 2769600 -247918254 + MER58A DNA MER1_type 2 220 -4 198 103 0 0 chr2 2770683 2770712 -247917142 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2312 109 43 3 chr2 2772284 2772634 -247915220 + L1PA16 LINE L1 5793 6156 -10 368 82 16 0 chr2 2774151 2774212 -247913642 + (CA)n Simple_repeat Simple_repeat 2 63 0 24 103 0 0 chr2 2774252 2774339 -247913515 + AT_rich Low_complexity Low_complexity 1 87 0 22 70 0 0 chr2 2774675 2774718 -247913136 + AT_rich Low_complexity Low_complexity 1 43 0 1848 153 33 24 chr2 2776717 2777051 -247910803 - MER1B DNA MER1_type 0 337 1 340 273 80 33 chr2 2777231 2777381 -247910473 + MER103 DNA DNA 10 166 0 225 178 0 0 chr2 2777611 2777656 -247910198 + CT-rich Low_complexity Low_complexity 3 47 0 297 320 0 0 chr2 2779295 2779370 -247908484 + polypurine Low_complexity Low_complexity 3 77 0 497 99 0 0 chr2 2779470 2779541 -247908313 + L1P3 LINE L1 5384 5454 -700 265 127 0 111 chr2 2779532 2779595 -247908259 + L1MA8 LINE L1 6236 6291 0 * 366 290 55 45 chr2 2781143 2781343 -247906511 - L2 LINE L2 -534 2780 2579 205 316 11 0 chr2 2781398 2781493 -247906361 - L2 LINE L2 -939 2375 2280 223 353 88 0 chr2 2781772 2781908 -247905946 + L2 LINE L2 2211 2358 -956 1777 189 54 23 chr2 2781985 2782082 -247905772 - MLT1A1 LTR MaLR 0 365 272 1675 137 103 37 chr2 2782082 2782432 -247905422 + THE1C LTR MaLR 3 375 0 1777 189 54 23 chr2 2782432 2782688 -247905166 - MLT1A1 LTR MaLR -93 272 1 423 247 147 65 chr2 2784353 2784584 -247903270 - MIR SINE MIR 0 262 13 261 234 68 104 chr2 2785223 2785415 -247902439 + L1MB7 LINE L1 72 256 -6286 778 299 74 11 chr2 2785579 2785943 -247901911 + L1MB7 LINE L1 485 871 -5671 2433 267 49 39 chr2 2786130 2788261 -247899593 + L1MB7 LINE L1 946 3081 -3563 * 3218 219 29 54 chr2 2788249 2788337 -247899517 + L1MB7 LINE L1 4755 4844 -1838 1717 181 79 18 chr2 2788337 2788679 -247899175 + MLT1A1 LTR MaLR 3 365 0 3218 219 29 54 chr2 2788679 2789007 -247898847 + L1MB7 LINE L1 4844 5179 -1503 2421 76 0 22 chr2 2789007 2789324 -247898530 + AluY SINE Alu 1 310 -1 3218 219 29 54 chr2 2789324 2790334 -247897520 + L1MB7 LINE L1 5179 6140 -542 1417 208 7 13 chr2 2790357 2790665 -247897189 + L1MB7 LINE L1 6362 6667 -15 2241 89 0 11 chr2 2791203 2791523 -247896331 - AluSg SINE Alu 0 318 2 234 204 0 20 chr2 2793867 2793916 -247893938 + MLT1E LTR MaLR 113 160 -433 666 287 46 26 chr2 2793986 2794293 -247893561 + MLT1E LTR MaLR 281 593 0 280 281 12 12 chr2 2795113 2795195 -247892659 + L2 LINE L2 3187 3268 -4 240 357 25 25 chr2 2797387 2797583 -247890271 + MIR SINE MIR 44 239 -23 242 261 18 45 chr2 2799052 2799163 -247888691 - MIR3 SINE MIR -4 204 97 303 49 0 0 chr2 2799203 2799244 -247888610 + (TCTCTG)n Simple_repeat Simple_repeat 2 42 0 194 278 0 37 chr2 2799291 2799345 -247888509 + MIR SINE MIR 66 117 -91 2152 252 63 18 chr2 2799544 2799729 -247888125 + MER82 DNA MER2_type 12 187 -466 14525 135 26 18 chr2 2799729 2802122 -247885732 - Tigger1 DNA MER2_type 0 2418 5 2152 252 63 18 chr2 2802122 2802550 -247885304 + MER82 DNA MER2_type 187 653 0 22 0 0 0 chr2 2802564 2802586 -247885268 + AT_rich Low_complexity Low_complexity 1 22 0 6003 42 0 0 chr2 2802913 2803643 -247884211 - L1PA5 LINE L1 -743 5403 4674 6452 41 1 4 chr2 2803643 2804403 -247883451 + L1PA5 LINE L1 5390 6151 -3 21 0 0 0 chr2 2805525 2805546 -247882308 + AT_rich Low_complexity Low_complexity 1 21 0 1825 176 58 6 chr2 2807253 2807600 -247880254 + MSTB LTR MaLR 2 366 -60 716 199 28 33 chr2 2807985 2808166 -247879688 + MER20 DNA MER1_type 7 186 -33 206 245 20 0 chr2 2810933 2810982 -247876872 + (TCCA)n Simple_repeat Simple_repeat 4 53 0 791 183 4 0 chr2 2811003 2811273 -247876581 + (TCCA)n Simple_repeat Simple_repeat 1 271 0 351 0 0 0 chr2 2812102 2812141 -247875713 + (TG)n Simple_repeat Simple_repeat 2 40 0 21 36 0 0 chr2 2812398 2812426 -247875428 + AT_rich Low_complexity Low_complexity 1 28 0 1928 141 0 21 chr2 2815827 2816152 -247871702 + AluSx SINE Alu 1 319 0 226 292 60 77 chr2 2816469 2816637 -247871217 + MIR SINE MIR 81 245 -17 770 282 18 0 chr2 2816770 2816990 -247870864 + MER58A DNA MER1_type 1 224 0 441 0 0 0 chr2 2819373 2819422 -247868432 + (TA)n Simple_repeat Simple_repeat 1 49 0 306 287 39 39 chr2 2819819 2819948 -247867906 + L2 LINE L2 1744 1872 -1442 433 188 0 26 chr2 2820028 2820145 -247867709 + CT-rich Low_complexity Low_complexity 3 116 0 389 299 81 11 chr2 2820257 2820528 -247867326 - LTR16A LTR ERVL -16 434 145 221 311 19 9 chr2 2820703 2820809 -247867045 + L2 LINE L2 2229 2335 -979 223 277 40 30 chr2 2822084 2822185 -247865669 - MER5A DNA MER1_type -74 115 14 214 373 77 21 chr2 2823913 2824146 -247863708 + L2 LINE L2 3006 3251 -62 180 111 0 0 chr2 2824186 2824213 -247863641 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 452 232 48 16 chr2 2824748 2824873 -247862981 + L2 LINE L2 3185 3313 0 496 305 30 39 chr2 2826015 2826303 -247861551 + MLT1H1 LTR MaLR 12 297 -288 61 58 0 0 chr2 2827547 2827650 -247860204 + AT_rich Low_complexity Low_complexity 1 103 0 28 0 0 0 chr2 2829964 2829992 -247857862 + AT_rich Low_complexity Low_complexity 1 28 0 1898 98 4 23 chr2 2830706 2830970 -247856884 - AluSg SINE Alu -51 259 1 2312 90 0 13 chr2 2830972 2831273 -247856581 - AluSg SINE Alu -6 304 8 459 323 17 43 chr2 2831668 2831900 -247855954 + MIR SINE MIR 18 243 -19 360 0 0 0 chr2 2832333 2832373 -247855481 + (TG)n Simple_repeat Simple_repeat 1 40 0 180 0 0 0 chr2 2832372 2832392 -247855462 + (GA)n Simple_repeat Simple_repeat 1 20 0 * 1029 213 153 67 chr2 2832743 2832887 -247854967 + MLT1D LTR MaLR 1 131 -374 2065 130 138 5 chr2 2832887 2833265 -247854589 + MSTA LTR MaLR 1 428 0 1029 213 153 67 chr2 2833265 2833585 -247854269 + MLT1D LTR MaLR 131 505 0 2266 113 0 0 chr2 2833795 2834095 -247853759 - AluSx SINE Alu -12 300 1 321 315 87 8 chr2 2834932 2835059 -247852795 + L2 LINE L2 3136 3272 0 1177 73 12 6 chr2 2836585 2836750 -247851104 - L1PA13 LINE L1 -4 6159 5994 318 281 132 12 chr2 2837348 2837515 -247850339 + MIR SINE MIR 20 206 -56 1821 139 10 23 chr2 2837648 2837951 -247849903 - AluSq SINE Alu -14 299 1 21 0 0 0 chr2 2838132 2838153 -247849701 + AT_rich Low_complexity Low_complexity 1 21 0 355 340 69 14 chr2 2838266 2838554 -247849300 + L1 LINE L1 4031 4334 -1812 239 296 0 20 chr2 2838857 2838955 -247848899 + L1 LINE L1 4741 4836 -1310 2659 40 0 0 chr2 2839124 2839421 -247848433 + AluY SINE Alu 1 297 -14 2254 110 3 3 chr2 2841404 2841705 -247846149 - AluSc SINE Alu -8 301 1 3941 60 12 6 chr2 2841746 2842249 -247845605 + L1PA8 LINE L1 5662 6167 -5 1271 182 121 49 chr2 2843947 2844294 -247843560 + MLT1A2 LTR MaLR 1 372 -2 2969 85 3 6 chr2 2844620 2844985 -247842869 + THE1B LTR MaLR 1 364 0 2064 62 4 0 chr2 2845391 2845650 -247842204 + L1PA8 LINE L1 5662 5921 -251 12122 31 2 4 chr2 2846227 2848353 -247839501 + L1PA3 LINE L1 4031 6155 0 2225 85 0 72 chr2 2848835 2849173 -247838681 + AluSx SINE Alu 1 312 0 2393 90 3 0 chr2 2849920 2850230 -247837624 - AluY SINE Alu 0 311 1 1047 125 0 0 chr2 2850230 2850366 -247837488 - AluSq/x SINE Alu -177 136 1 21 0 0 0 chr2 2850810 2850831 -247837023 + AT_rich Low_complexity Low_complexity 1 21 0 2234 112 0 0 chr2 2852188 2852483 -247835371 - AluSx SINE Alu -16 296 2 401 322 32 20 chr2 2902990 2903207 -247784647 - MIR SINE MIR -31 231 17 22 0 0 0 chr2 2904376 2904398 -247783456 + AT_rich Low_complexity Low_complexity 1 22 0 1063 188 58 21 chr2 2904523 2904763 -247783091 - AluJo SINE Alu -2 310 62 1847 157 0 40 chr2 2906515 2906840 -247781014 - AluJb SINE Alu 0 312 1 23 0 0 0 chr2 2906847 2906870 -247780984 + AT_rich Low_complexity Low_complexity 1 23 0 208 261 29 43 chr2 2908150 2908219 -247779635 + L2 LINE L2 3246 3313 0 711 192 0 0 chr2 2911061 2911708 -247776146 + (CAACC)n Simple_repeat Simple_repeat 1 647 0 2220 135 6 0 chr2 2911789 2912100 -247775754 - AluSp SINE Alu 0 313 1 247 329 13 0 chr2 2913246 2913325 -247774529 + MIR3 SINE MIR 81 160 -48 191 293 52 43 chr2 2913952 2914068 -247773786 + MIR SINE MIR 48 164 -98 1796 137 22 4 chr2 2915000 2915299 -247772555 + AluSq SINE Alu 1 304 0 180 0 0 0 chr2 2916260 2916280 -247771574 + (TG)n Simple_repeat Simple_repeat 1 20 0 1163 191 120 11 chr2 2916649 2916916 -247770938 + L1MB3 LINE L1 5695 5990 -193 306 206 43 33 chr2 2917005 2917097 -247770757 + GA-rich Low_complexity Low_complexity 4 96 0 196 264 0 0 chr2 2917485 2917538 -247770316 + L2 LINE L2 3261 3313 0 1372 176 58 6 chr2 2920810 2921089 -247766765 + MLT1D LTR MaLR 250 505 0 183 289 0 0 chr2 2921573 2921618 -247766236 - L2 LINE L2 -11 3302 3258 11861 187 20 9 chr2 2922001 2924502 -247763352 + L1MA2 LINE L1 3530 6055 -1510 6717 127 27 2 chr2 2924500 2925796 -247762058 + L1MA2 LINE L1 6399 7723 0 * 29 78 0 0 chr2 2925879 2925943 -247761911 + AT_rich Low_complexity Low_complexity 1 64 0 411 200 17 9 chr2 2926818 2926933 -247760921 + GA-rich Low_complexity Low_complexity 2 117 0 24 0 0 0 chr2 2927946 2927970 -247759884 + AT_rich Low_complexity Low_complexity 1 24 0 236 213 0 0 chr2 2928105 2928152 -247759702 + A-rich Low_complexity Low_complexity 1 47 0 324 248 59 20 chr2 2929508 2929609 -247758245 + MIR SINE MIR 158 262 0 779 263 42 9 chr2 2931329 2931546 -247756308 + MER58A DNA MER1_type 1 224 0 570 245 34 0 chr2 2932006 2932153 -247755701 - MER5A DNA MER1_type -32 157 6 507 101 0 14 chr2 2932384 2932453 -247755401 + Alu SINE Alu 6 73 -236 739 211 33 33 chr2 2932458 2932638 -247755216 + L1MA9 LINE L1 6004 6183 -129 345 40 0 40 chr2 2932629 2932679 -247755175 - L1HS LINE L1 -1715 4431 4384 * 8347 34 2 2 chr2 2932668 2934549 -247753305 + L1HS LINE L1 4432 6312 0 231 330 45 57 chr2 2934759 2934935 -247752919 + MIR SINE MIR 47 220 -42 355 248 53 53 chr2 2935158 2935291 -247752563 + MIR SINE MIR 60 192 -70 351 96 0 0 chr2 2936106 2936158 -247751696 + (TG)n Simple_repeat Simple_repeat 2 53 0 353 265 12 0 chr2 2937086 2937169 -247750685 + L2 LINE L2 3230 3313 0 290 83 0 42 chr2 2937314 2937383 -247750471 + Alu SINE Alu 249 301 0 2427 67 0 3 chr2 2937394 2937693 -247750161 + AluY SINE Alu 1 298 -13 196 75 25 25 chr2 2937899 2937939 -247749915 + (TA)n Simple_repeat Simple_repeat 2 41 0 387 103 17 0 chr2 2938891 2938949 -247748905 + L1PA5 LINE L1 6092 6150 -4 287 319 101 17 chr2 2939013 2939132 -247748722 - MIR3 SINE MIR -68 140 12 434 335 53 33 chr2 2939905 2940005 -247747849 + MIR SINE MIR 13 109 -153 1922 101 77 14 chr2 2940005 2940291 -247747563 - AluSq SINE Alu -9 304 1 434 335 53 33 chr2 2940291 2940435 -247747419 + MIR SINE MIR 109 262 0 239 301 147 15 chr2 2940633 2940769 -247747085 + MIR SINE MIR 84 237 -25 370 289 59 15 chr2 2941046 2941181 -247746673 - MIR SINE MIR -24 238 98 2416 117 33 22 chr2 2941614 2941974 -247745880 + THE1B LTR MaLR 1 364 0 261 283 50 0 chr2 2942295 2942414 -247745440 - MIR SINE MIR -61 147 21 190 257 115 35 chr2 2944251 2944364 -247743490 - MER5C DNA MER1_type -202 122 1 972 264 54 20 chr2 2944948 2945300 -247742554 + MLT1A1 LTR MaLR 2 365 0 568 241 41 6 chr2 2946556 2946726 -247741128 - MLT1B LTR MaLR -6 384 209 238 83 0 56 chr2 2946821 2946857 -247740997 - MLT1B LTR MaLR -356 34 1 517 274 148 16 chr2 2947598 2947971 -247739883 + L2 LINE L2 2244 2665 -649 1073 163 24 0 chr2 2949061 2949270 -247738584 + L1MA4 LINE L1 6081 6294 -6 383 200 0 11 chr2 2949278 2949368 -247738486 + GA-rich Low_complexity Low_complexity 3 91 0 396 0 0 0 chr2 2950186 2950230 -247737624 + (TG)n Simple_repeat Simple_repeat 1 44 0 2007 104 54 17 chr2 2951955 2952253 -247735601 - AluY SINE Alu -2 309 1 406 311 67 16 chr2 2953182 2953375 -247734479 - MIR SINE MIR -51 211 9 558 238 41 74 chr2 2953393 2953758 -247734096 - L1MC5 LINE L1 -35 7926 7574 239 253 13 0 chr2 2954363 2954442 -247733412 + GA-rich Low_complexity Low_complexity 1 80 0 544 161 8 15 chr2 2954465 2954595 -247733259 + GA-rich Low_complexity Low_complexity 4 132 0 292 264 56 16 chr2 2955516 2955641 -247732213 + MIR SINE MIR 89 218 -44 249 282 84 0 chr2 2955833 2955904 -247731950 - MIR3 SINE MIR -37 171 95 2314 113 50 14 chr2 2955984 2956346 -247731508 + THE1C LTR MaLR 1 375 0 309 350 122 0 chr2 2956726 2956906 -247730948 + L3 LINE CR1 1284 1485 -92 209 310 11 23 chr2 2957175 2957262 -247730592 + L2 LINE L2 3227 3312 -1 313 308 58 24 chr2 2957522 2957730 -247730124 + L1ME LINE L1 5590 5804 -317 2024 135 0 0 chr2 2957776 2958058 -247729796 + AluSx SINE Alu 1 282 -30 26 30 0 0 chr2 2958254 2958287 -247729567 + AT_rich Low_complexity Low_complexity 1 33 0 218 213 82 0 chr2 2958856 2958917 -247728937 + MIR SINE MIR 107 172 -90 2016 98 10 49 chr2 2959693 2959999 -247727855 - AluSc SINE Alu -15 294 1 2126 133 0 3 chr2 2960957 2961265 -247726589 - AluSg SINE Alu -3 307 1 234 116 0 0 chr2 2961930 2961973 -247725881 + (CA)n Simple_repeat Simple_repeat 2 44 0 1934 80 8 0 chr2 2962000 2962249 -247725605 + AluSp SINE Alu 43 293 -20 255 243 0 43 chr2 2962580 2962650 -247725204 + MIR3 SINE MIR 126 192 -16 406 315 118 0 chr2 2963111 2963314 -247724540 - MIR SINE MIR -28 234 8 794 192 83 33 chr2 2963478 2963718 -247724136 + Charlie5 DNA MER1_type 2334 2585 -27 449 253 59 24 chr2 2965669 2965839 -247722015 + MER5B DNA MER1_type 3 178 0 247 271 52 84 chr2 2969950 2970105 -247717749 + L3 LINE CR1 1426 1575 -2 978 107 0 0 chr2 2970511 2970688 -247717166 + (GA)n Simple_repeat Simple_repeat 2 178 0 637 159 0 12 chr2 2970689 2970859 -247716995 + GA-rich Low_complexity Low_complexity 2 169 0 236 240 10 0 chr2 2970875 2970975 -247716879 + GA-rich Low_complexity Low_complexity 2 102 0 2323 97 0 3 chr2 2973827 2974135 -247713719 - AluSc SINE Alu -2 307 1 218 266 16 0 chr2 2976177 2976259 -247711595 + (TCTCTG)n Simple_repeat Simple_repeat 1 83 0 185 304 38 0 chr2 2976390 2976469 -247711385 - L2 LINE L2 -7 3306 3225 21 0 0 0 chr2 2976509 2976530 -247711324 + AT_rich Low_complexity Low_complexity 1 21 0 1860 144 29 13 chr2 2976531 2976837 -247711017 + AluJo SINE Alu 1 311 -1 451 248 57 0 chr2 2979651 2979756 -247708098 - MER58A DNA MER1_type 0 114 4 711 173 74 20 chr2 2979876 2980078 -247707776 + MER33 DNA MER1_type 21 233 -91 1758 148 184 11 chr2 2980552 2980917 -247706937 - MSTA LTR MaLR 0 428 1 313 226 22 50 chr2 2982920 2983101 -247704753 + (CACTA)n Simple_repeat Simple_repeat 4 179 0 215 277 0 58 chr2 2983077 2983265 -247704589 + (CACTC)n Simple_repeat Simple_repeat 2 178 0 * 240 284 0 62 chr2 2983174 2983350 -247704504 + (CACTT)n Simple_repeat Simple_repeat 3 167 0 * 302 224 18 64 chr2 2983233 2983810 -247704044 + (CACTA)n Simple_repeat Simple_repeat 1 550 0 215 283 6 50 chr2 2984063 2984222 -247703632 + (CACTC)n Simple_repeat Simple_repeat 2 153 0 279 227 0 57 chr2 2984222 2984398 -247703456 + (CTATA)n Simple_repeat Simple_repeat 1 166 0 329 230 0 73 chr2 2984492 2984683 -247703171 + (CTACT)n Simple_repeat Simple_repeat 3 179 0 276 245 0 58 chr2 2984823 2985011 -247702843 + (CTATA)n Simple_repeat Simple_repeat 1 177 0 205 274 0 60 chr2 2985072 2985240 -247702614 + (CTTTA)n Simple_repeat Simple_repeat 5 162 0 394 218 0 52 chr2 2985292 2985466 -247702388 + (CACTA)n Simple_repeat Simple_repeat 3 167 0 1732 167 0 7 chr2 2987312 2987587 -247700267 + AluJb SINE Alu 1 273 -39 180 0 0 0 chr2 2989535 2989555 -247698299 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 1067 117 0 0 chr2 2989555 2989700 -247698154 - L1PA10 LINE L1 -19 6149 6005 2253 131 0 0 chr2 2989700 2990035 -247697819 + L1P LINE L1 4681 5015 -1131 2086 133 0 22 chr2 2991784 2992100 -247695754 - AluY SINE Alu -2 309 1 26 74 0 0 chr2 2992573 2992627 -247695227 + AT_rich Low_complexity Low_complexity 1 54 0 192 77 0 0 chr2 2994736 2994762 -247693092 + (TA)n Simple_repeat Simple_repeat 2 27 0 277 301 18 9 chr2 3001850 3001963 -247685891 + GA-rich Low_complexity Low_complexity 1 114 0 24 0 0 0 chr2 3002804 3002828 -247685026 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr2 3003303 3003325 -247684529 + AT_rich Low_complexity Low_complexity 1 22 0 324 0 0 0 chr2 3006693 3006729 -247681125 + (CA)n Simple_repeat Simple_repeat 2 37 0 302 138 17 0 chr2 3007246 3007304 -247680550 + (TG)n Simple_repeat Simple_repeat 2 60 0 195 42 0 0 chr2 3008205 3008229 -247679625 + (TC)n Simple_repeat Simple_repeat 2 25 0 225 0 0 0 chr2 3008231 3008256 -247679598 + (CA)n Simple_repeat Simple_repeat 1 25 0 226 244 0 0 chr2 3008704 3008749 -247679105 + (CATATA)n Simple_repeat Simple_repeat 4 48 0 192 97 0 0 chr2 3009640 3009671 -247678183 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1501 153 91 28 chr2 3010775 3011062 -247676792 + MER1B DNA MER1_type 35 339 0 26 0 0 0 chr2 3011422 3011448 -247676406 + AT_rich Low_complexity Low_complexity 1 26 0 248 375 0 0 chr2 3011800 3011888 -247675966 + LTR67 LTR ERVL 108 195 -362 753 209 0 0 chr2 3012775 3012909 -247674945 + FRAM SINE Alu 1 129 -47 3477 20 0 0 chr2 3012910 3013312 -247674542 + L1PA4 LINE L1 5752 6153 -2 753 209 0 0 chr2 3013823 3013957 -247673897 + FRAM SINE Alu 1 129 -47 3477 20 0 0 chr2 3013958 3014360 -247673494 + L1PA4 LINE L1 5752 6153 -2 536 34 11 67 chr2 3014439 3014528 -247673326 - L1PA3 LINE L1 -3 6152 6069 281 258 50 17 chr2 3016001 3016121 -247671733 + LTR67 LTR ERVL 434 557 0 306 256 202 8 chr2 3016724 3016853 -247671001 + MER5A DNA MER1_type 36 189 0 607 225 144 32 chr2 3016861 3017024 -247670830 - MER33 DNA MER1_type -2261 324 181 2209 104 3 0 chr2 3017024 3017321 -247670533 - AluSp SINE Alu -15 298 1 2118 122 3 0 chr2 3017321 3017609 -247670245 - AluSg SINE Alu -21 289 1 607 225 144 32 chr2 3017609 3017728 -247670126 - MER33 DNA MER1_type -2403 182 9 296 245 157 20 chr2 3018701 3018803 -247669051 - MIR3 SINE MIR -6 202 87 340 173 0 19 chr2 3018808 3018912 -247668942 + GA-rich Low_complexity Low_complexity 1 102 0 548 295 50 42 chr2 3021030 3021271 -247666583 + MIR SINE MIR 12 254 -8 1331 230 65 68 chr2 3021986 3022704 -247665150 - L1MC5 LINE L1 -697 7264 6542 2057 134 90 3 chr2 3022721 3023056 -247664798 - THE1B LTR MaLR 0 364 1 306 73 0 0 chr2 3023915 3023956 -247663898 + (TGAA)n Simple_repeat Simple_repeat 1 41 0 22 0 0 0 chr2 3024851 3024873 -247662981 + AT_rich Low_complexity Low_complexity 1 22 0 36 53 0 0 chr2 3025063 3025120 -247662734 + AT_rich Low_complexity Low_complexity 1 57 0 342 309 26 26 chr2 3027045 3027197 -247660657 - MIR SINE MIR 0 262 111 1740 80 16 0 chr2 3027219 3027569 -247660285 - L1P3 LINE L1 -634 5520 5167 823 30 20 0 chr2 3027571 3027672 -247660182 + L1PA7 LINE L1 6050 6152 -2 25 31 0 0 chr2 3027892 3027924 -247659930 + AT_rich Low_complexity Low_complexity 1 32 0 1049 99 43 0 chr2 3028074 3028215 -247659639 + AluSg/x SINE Alu 154 300 -12 776 256 94 3 chr2 3028758 3029067 -247658787 + L1MD3 LINE L1 7659 7995 0 641 76 11 0 chr2 3029280 3029372 -247658482 + (TTTC)n Simple_repeat Simple_repeat 4 96 0 28 29 0 0 chr2 3029407 3029442 -247658412 + AT_rich Low_complexity Low_complexity 1 35 0 1964 222 0 22 chr2 3030069 3030568 -247657286 + L1PB4 LINE L1 2226 2713 -3433 200 59 29 0 chr2 3030583 3030617 -247657237 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 1198 67 6 0 chr2 3030622 3030787 -247657067 - L1PA8A LINE L1 -28 6103 5938 10215 193 29 21 chr2 3030790 3034150 -247653704 + L1PB4 LINE L1 2703 6090 -66 273 172 0 0 chr2 3034202 3034260 -247653594 + L1PB4 LINE L1 6097 6154 -2 256 219 14 14 chr2 3034670 3034743 -247653111 - MLT2E LTR ERVL -525 103 31 616 277 27 31 chr2 3035439 3035663 -247652191 - MIR SINE MIR 0 262 40 3298 183 110 97 chr2 3035787 3036314 -247651540 - L1MC3 LINE L1 -60 7725 7206 248 220 30 40 chr2 3036314 3036414 -247651440 - MLT1F1 LTR MaLR -445 122 24 3298 183 110 97 chr2 3036414 3036454 -247651400 - L1MC3 LINE L1 -579 7206 7168 834 247 70 78 chr2 3036454 3036851 -247651003 + MSTD LTR MaLR 1 394 -2 3298 183 110 97 chr2 3036851 3037422 -247650432 - L1MC3 LINE L1 -617 7168 6499 1563 98 0 9 chr2 3038204 3038428 -247649426 - L1PA8 LINE L1 0 6172 5951 670 279 154 27 chr2 3039009 3039708 -247648146 + HAL1 LINE L1 841 1628 -879 239 0 32 0 chr2 3039719 3039750 -247648104 + (TAGA)n Simple_repeat Simple_repeat 4 35 0 768 311 107 36 chr2 3040205 3041010 -247646844 + HAL1 LINE L1 1646 2507 0 296 311 133 0 chr2 3041473 3041624 -247646230 - MLT1E2 LTR MaLR -144 482 312 623 261 39 93 chr2 3043243 3043599 -247644255 - MER46C DNA MER2_type 0 338 2 240 111 0 0 chr2 3043716 3043752 -247644102 + (CA)n Simple_repeat Simple_repeat 1 36 0 291 122 0 0 chr2 3044934 3044983 -247642871 + (TC)n Simple_repeat Simple_repeat 1 49 0 3128 178 85 15 chr2 3045297 3045531 -247642323 - L1MC1 LINE L1 0 6333 6117 2624 91 31 0 chr2 3045531 3045884 -247641970 + THE1B LTR MaLR 1 364 0 3128 178 85 15 chr2 3045884 3046319 -247641535 - L1MC1 LINE L1 -216 6117 5634 16782 83 4 12 chr2 3046888 3048835 -247639019 - L1PA7 LINE L1 0 6154 4250 1729 81 0 136 chr2 3048835 3049145 -247638709 - AluY SINE Alu 0 311 44 16782 83 4 12 chr2 3049145 3050297 -247637557 - L1PA7 LINE L1 -1904 4250 3090 16872 123 14 21 chr2 3050297 3053042 -247634812 - L1P LINE L1 -2823 3323 598 321 326 7 21 chr2 3053392 3053536 -247634318 - MIR SINE MIR -80 182 41 197 307 0 27 chr2 3053794 3053865 -247633989 + L2 LINE L2 2323 2391 -923 277 241 44 95 chr2 3053865 3054023 -247633831 + MER5A DNA MER1_type 1 150 -39 192 320 153 41 chr2 3054048 3054435 -247633419 + L2 LINE L2 2397 2826 -488 590 203 20 43 chr2 3054890 3055043 -247632811 + THE1C LTR MaLR 1 154 -262 9925 120 53 6 chr2 3055043 3056512 -247631342 + THE1C-int LTR MaLR 42 1579 -1 1706 144 88 31 chr2 3056515 3056868 -247630986 + THE1C LTR MaLR 3 375 0 710 280 77 63 chr2 3057765 3058554 -247629300 + L1M4 LINE L1 2972 3771 -2375 2168 169 40 33 chr2 3058586 3059132 -247628722 + MLT2A2 LTR ERVL 2 554 0 326 263 70 18 chr2 3059320 3059434 -247628420 + HAL1 LINE L1 22 141 -2366 381 302 35 12 chr2 3059615 3059787 -247628067 + HAL1 LINE L1 157 332 -2175 800 310 31 59 chr2 3059835 3060571 -247627283 + L2 LINE L2 2594 3310 -3 634 183 48 22 chr2 3060721 3060860 -247626994 - MLT1E1 LTR MaLR -6 637 406 518 364 113 7 chr2 3060947 3061400 -247626454 - L2 LINE L2 -527 2787 2287 186 337 123 16 chr2 3062185 3062372 -247625482 + L2 LINE L2 1876 2082 -1232 2155 89 13 23 chr2 3062425 3062750 -247625104 - AluY SINE Alu 0 322 1 834 300 77 73 chr2 3063095 3063324 -247624530 + L2 LINE L2 2287 2513 -800 3245 66 0 0 chr2 3063324 3063732 -247624122 - L1PA8 LINE L1 0 6172 5765 834 300 77 73 chr2 3063732 3064177 -247623677 + L2 LINE L2 2513 2955 -358 2423 156 46 2 chr2 3064177 3064587 -247623267 - MSTA LTR MaLR 0 428 1 6317 191 84 44 chr2 3064587 3066104 -247621750 - MSTA-int LTR MaLR 0 1580 3 2579 112 34 53 chr2 3066106 3066486 -247621368 - MSTA LTR MaLR 0 428 55 2271 95 0 46 chr2 3066486 3066811 -247621043 - AluSg SINE Alu 0 310 1 2579 112 34 53 chr2 3066811 3066866 -247620988 - MSTA LTR MaLR -373 55 1 834 300 77 73 chr2 3066866 3067189 -247620665 + L2 LINE L2 2955 3313 0 325 320 39 20 chr2 3067516 3067669 -247620185 + MIR3 SINE MIR 27 182 -26 234 297 138 21 chr2 3068685 3068830 -247619024 - L2 LINE L2 0 3272 3111 262 122 0 0 chr2 3069011 3069052 -247618802 + AluSx SINE Alu 1 41 -260 2060 118 0 0 chr2 3069052 3069324 -247618530 + AluSx SINE Alu 19 290 -22 2255 81 0 0 chr2 3069331 3069654 -247618200 + AluY SINE Alu 9 331 0 1618 150 4 33 chr2 3070281 3070555 -247617299 + AluJo SINE Alu 38 303 -9 1191 209 41 55 chr2 3070587 3070948 -247616906 + MSTB2 LTR MaLR 41 457 0 231 333 0 0 chr2 3072493 3072559 -247615295 - L1MCc LINE L1 -3407 3534 3469 1412 208 19 55 chr2 3072590 3072975 -247614879 - MLT1A2 LTR MaLR -2 465 1 1188 253 65 46 chr2 3073073 3073795 -247614059 - L1MCc LINE L1 -4891 1532 1184 2323 108 0 0 chr2 3073869 3074165 -247613689 - AluSx SINE Alu -16 296 1 239 322 43 9 chr2 3074211 3074326 -247613528 + L1P LINE L1 4099 4217 -1929 22 0 0 0 chr2 3076268 3076290 -247611564 + AT_rich Low_complexity Low_complexity 1 22 0 2289 106 140 11 chr2 3078040 3078419 -247609435 - MSTA LTR MaLR 0 428 1 194 298 113 32 chr2 3079432 3079556 -247608298 + L2 LINE L2 3139 3272 0 653 305 64 54 chr2 3079594 3080017 -247607837 - L2 LINE L2 -2 3311 2885 291 289 33 0 chr2 3080319 3080440 -247607414 + L1ME4a LINE L1 5769 5893 -228 376 332 88 45 chr2 3081366 3081854 -247606000 + HAL1 LINE L1 597 1105 -1402 423 304 175 31 chr2 3081925 3082532 -247605322 + HAL1 LINE L1 1450 2193 -314 1550 193 116 30 chr2 3082532 3082962 -247604892 + MLT1C LTR MaLR 1 467 0 423 304 175 31 chr2 3082962 3083124 -247604730 + HAL1 LINE L1 2193 2330 -177 313 285 39 31 chr2 3083230 3083360 -247604494 - MIR SINE MIR -34 228 98 1231 151 130 50 chr2 3083364 3083663 -247604191 - L1MA6 LINE L1 -366 5934 5612 182 317 17 0 chr2 3083663 3083723 -247604131 - MIR SINE MIR -188 74 14 180 179 0 0 chr2 3083887 3083926 -247603928 + (TG)n Simple_repeat Simple_repeat 1 39 0 264 122 0 0 chr2 3083978 3084019 -247603835 - MADE1 DNA Mariner -39 41 1 910 288 137 24 chr2 3084067 3084650 -247603204 + L1ME3A LINE L1 5522 6170 0 1311 155 132 78 chr2 3084724 3085020 -247602834 + AluJb SINE Alu 1 312 0 326 188 24 47 chr2 3085292 3085377 -247602477 + L1MA4 LINE L1 6211 6293 -7 286 343 10 0 chr2 3087228 3087330 -247600524 - L1MCc LINE L1 -5984 439 337 386 20 0 0 chr2 3088663 3088712 -247599142 - AluY SINE Alu 0 301 253 1144 66 66 0 chr2 3088712 3088864 -247598990 - AluSg/x SINE Alu -20 290 129 2322 95 0 10 chr2 3088882 3089187 -247598667 - AluSx SINE Alu -10 302 1 284 178 27 56 chr2 3089265 3089404 -247598450 + MSR1 Satellite Satellite 1 135 -25 1444 46 0 23 chr2 3089511 3089685 -247598169 - AluY SINE Alu -141 170 1 238 232 18 0 chr2 3089689 3089745 -247598109 + MER3 DNA MER1_type 153 209 0 291 230 0 52 chr2 3090299 3090473 -247597381 + (CCCCAG)n Simple_repeat Simple_repeat 1 165 0 314 223 0 51 chr2 3090489 3090664 -247597190 + (CCCCAG)n Simple_repeat Simple_repeat 1 166 0 299 236 0 52 chr2 3090717 3090891 -247596963 + (CCCCAG)n Simple_repeat Simple_repeat 1 165 0 281 119 24 0 chr2 3091033 3091075 -247596779 - AluJ/FLAM SINE Alu -239 63 21 2137 121 0 0 chr2 3091240 3091538 -247596316 + AluSq SINE Alu 1 298 -15 436 262 32 40 chr2 3092239 3092365 -247595489 - MIR3 SINE MIR -70 138 14 226 240 48 67 chr2 3093486 3093590 -247594264 - MSR1 Satellite Satellite 0 111 10 225 303 50 40 chr2 3093612 3093711 -247594143 - MSR1 Satellite Satellite -11 100 1 191 347 53 32 chr2 3094022 3094117 -247593737 + L2 LINE L2 3200 3296 -17 1990 125 3 3 chr2 3095177 3095488 -247592366 - AluJo SINE Alu -1 311 1 2347 59 0 3 chr2 3095795 3096098 -247591756 + AluSq SINE Alu 1 302 -11 1676 73 4 9 chr2 3096100 3096333 -247591521 + AluSg SINE Alu 1 232 -78 540 83 0 0 chr2 3096434 3096506 -247591348 + AluSg SINE Alu 230 301 -9 354 257 115 26 chr2 3096519 3096632 -247591222 - MIR SINE MIR -32 230 108 222 272 71 71 chr2 3096930 3097099 -247590755 + L2 LINE L2 2938 3106 -166 23 62 0 0 chr2 3099061 3099093 -247588761 + GC_rich Low_complexity Low_complexity 1 32 0 581 197 63 0 chr2 3099555 3099682 -247588172 - Charlie1 DNA MER1_type 0 2761 2627 597 237 103 5 chr2 3099684 3099878 -247587976 - Charlie1 DNA MER1_type -2547 214 2 285 98 0 0 chr2 3101856 3101897 -247585957 + (CA)n Simple_repeat Simple_repeat 2 42 0 1450 123 102 0 chr2 3102297 3102388 -247585466 + AluSx SINE Alu 25 105 -207 2012 90 7 0 chr2 3102388 3102665 -247585189 + AluSg SINE Alu 1 279 -31 279 0 0 0 chr2 3102668 3102699 -247585155 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1450 123 102 0 chr2 3102699 3102847 -247585007 + AluSx SINE Alu 106 293 -19 1000 185 158 68 chr2 3102864 3102998 -247584856 + AluJo SINE Alu 1 121 -181 2089 115 3 3 chr2 3102998 3103294 -247584560 + AluSg SINE Alu 1 296 -14 1000 185 158 68 chr2 3103294 3103424 -247584430 + AluJo SINE Alu 121 289 -13 1109 59 0 0 chr2 3103902 3104037 -247583817 + AluSq/x SINE Alu 1 135 -177 1599 134 59 66 chr2 3104037 3104342 -247583512 + AluSx SINE Alu 1 303 -9 2097 91 18 0 chr2 3104344 3104629 -247583225 + AluSq SINE Alu 2 291 -22 1274 138 153 15 chr2 3104648 3104909 -247582945 + AluJo SINE Alu 1 297 -15 347 275 22 11 chr2 3104909 3105000 -247582854 + MIR SINE MIR 59 150 -112 1886 156 0 0 chr2 3105146 3105434 -247582420 + AluJb SINE Alu 1 288 -24 577 248 76 109 chr2 3105547 3105849 -247582005 - L1ME LINE L1 -380 5790 5499 1731 187 74 19 chr2 3105864 3106227 -247581627 - MSTB1 LTR MaLR -6 426 44 3029 56 0 0 chr2 3106227 3106600 -247581254 - L1PA7 LINE L1 0 6154 5782 191 270 95 14 chr2 3106825 3106899 -247580955 - MIR SINE MIR -72 190 111 764 218 98 10 chr2 3107268 3107461 -247580393 - MIR SINE MIR -23 239 30 369 279 165 32 chr2 3107506 3107875 -247579979 - L2 LINE L2 -7 3265 2848 2561 48 0 0 chr2 3109790 3110101 -247577753 - AluY SINE Alu 0 311 1 227 330 50 0 chr2 3110445 3110545 -247577309 + L2 LINE L2 3202 3306 -7 1190 314 66 76 chr2 3112356 3112929 -247574925 - L1M4 LINE L1 -2053 4093 3533 228 111 0 0 chr2 3112929 3112965 -247574889 + (ATG)n Simple_repeat Simple_repeat 2 37 0 1190 314 66 76 chr2 3112965 3113362 -247574492 - L1M4 LINE L1 -2613 3533 3133 22 56 0 0 chr2 3113621 3113657 -247574197 + AT_rich Low_complexity Low_complexity 1 36 0 1040 236 25 22 chr2 3113750 3114068 -247573786 + L1 LINE L1 4304 4622 -1524 319 266 125 80 chr2 3114172 3114352 -247573502 - L1ME LINE L1 -357 5805 5604 1976 106 3 56 chr2 3114352 3114673 -247573181 - AluSg SINE Alu -6 304 1 319 266 125 80 chr2 3114673 3114804 -247573050 - L1ME LINE L1 -558 5604 5480 211 342 13 0 chr2 3115099 3115178 -247572676 + MIR SINE MIR 164 243 -19 22 0 0 0 chr2 3115312 3115334 -247572520 + AT_rich Low_complexity Low_complexity 1 22 0 624 227 51 60 chr2 3116133 3116349 -247571505 + MER20 DNA MER1_type 4 217 -2 433 351 29 40 chr2 3117550 3117929 -247569925 + ERVL LTR ERVL 4945 5319 -445 231 354 0 0 chr2 3118481 3118563 -247569291 + LTR16A LTR ERVL 319 400 -50 495 287 73 67 chr2 3118611 3118939 -247568915 + L1MC/D LINE L1 4039 4368 -1778 270 298 177 6 chr2 3118949 3119107 -247568747 - LTR33 LTR ERVL -8 513 329 429 363 46 31 chr2 3119488 3119813 -247568041 + L1MC/D LINE L1 4507 4836 -1310 719 269 48 35 chr2 3119900 3120127 -247567727 - MIR SINE MIR -7 255 26 25 65 0 0 chr2 3120193 3120239 -247567615 + AT_rich Low_complexity Low_complexity 1 46 0 482 310 25 10 chr2 3120448 3120645 -247567209 + L1MC/D LINE L1 5315 5514 -2294 589 281 45 45 chr2 3120722 3120943 -247566911 + L2 LINE L2 2650 2870 -444 702 245 119 42 chr2 3120971 3121257 -247566597 - L1ME3A LINE L1 -18 6152 5845 1243 191 36 50 chr2 3121861 3122164 -247565690 + AluJo SINE Alu 1 299 -3 5226 30 0 2 chr2 3122561 3123167 -247564687 - L1PA4 LINE L1 -1 6154 5550 1328 111 11 69 chr2 3123277 3123539 -247564315 - L1MA9 LINE L1 0 6312 6066 22 0 0 0 chr2 3123909 3123931 -247563923 + AT_rich Low_complexity Low_complexity 1 22 0 255 330 37 9 chr2 3124084 3124193 -247563661 + MIR SINE MIR 51 162 -100 4403 235 57 35 chr2 3124197 3124420 -247563434 + L1MB8 LINE L1 3722 3939 -2207 207 0 0 0 chr2 3124420 3124443 -247563411 + (TAA)n Simple_repeat Simple_repeat 1 23 0 4403 235 57 35 chr2 3124443 3125706 -247562148 + L1MB8 LINE L1 3939 5240 -906 2018 121 87 98 chr2 3125721 3126159 -247561695 - Tigger2a DNA MER2_type -1 433 1 1956 213 43 20 chr2 3126169 3126676 -247561178 + L1MB8 LINE L1 5293 5811 -367 384 237 34 17 chr2 3126762 3126880 -247560974 + L1MB8 LINE L1 6039 6158 -20 1618 238 8 6 chr2 3126880 3127237 -247560617 + MLT1A1 LTR MaLR 1 358 -7 18974 158 29 69 chr2 3127366 3127743 -247560111 - L1 LINE L1 -3789 3776 3386 189 94 0 0 chr2 3127743 3127775 -247560079 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 18974 158 29 69 chr2 3127775 3128791 -247559063 - L1 LINE L1 -4179 3386 2331 1895 116 25 3 chr2 3128791 3129075 -247558779 + AluSq SINE Alu 1 290 -23 18974 158 29 69 chr2 3129075 3130583 -247557271 - L1 LINE L1 -5234 2331 849 1422 127 19 0 chr2 3130583 3130796 -247557058 + AluSp SINE Alu 89 305 -8 18974 158 29 69 chr2 3130796 3131601 -247556253 - L1 LINE L1 -6716 849 13 777 333 59 100 chr2 3131602 3132411 -247555443 + L1ME3A LINE L1 5394 6169 -1 1101 304 127 22 chr2 3132698 3133484 -247554370 - L2 LINE L2 -665 2649 1781 217 213 21 0 chr2 3133511 3133558 -247554296 + L2 LINE L2 3266 3313 0 1135 175 0 0 chr2 3134253 3134459 -247553395 - AluJb SINE Alu -1 311 106 693 316 98 31 chr2 3134469 3134827 -247553027 + L1ME LINE L1 3369 3750 -2396 37 81 0 0 chr2 3134891 3134977 -247552877 + AT_rich Low_complexity Low_complexity 1 86 0 404 212 16 43 chr2 3135155 3135339 -247552515 + (TA)n Simple_repeat Simple_repeat 2 180 0 1846 261 97 56 chr2 3135358 3135947 -247551907 + L1ME LINE L1 3883 4446 -1700 2228 111 45 31 chr2 3135947 3136306 -247551548 - THE1B LTR MaLR 0 364 1 1846 261 97 56 chr2 3136306 3137153 -247550701 + L1ME LINE L1 4446 5378 -768 328 311 141 32 chr2 3137287 3137564 -247550290 + L1ME LINE L1 2133 2439 -3707 454 279 0 16 chr2 3137564 3137686 -247550168 + L1ME LINE L1 5640 5759 -411 905 257 117 18 chr2 3137907 3138249 -247549605 + L1ME LINE L1 5410 5785 -385 340 206 118 20 chr2 3138578 3138680 -247549174 - HAL1 LINE L1 -1423 1084 973 1384 31 12 0 chr2 3139264 3139426 -247548428 + L1PA5 LINE L1 5984 6147 -7 234 62 0 0 chr2 3140029 3140061 -247547793 + (TG)n Simple_repeat Simple_repeat 1 32 0 183 42 0 0 chr2 3140308 3140332 -247547522 + (TTTTTA)n Simple_repeat Simple_repeat 4 27 0 2133 118 0 17 chr2 3140683 3141044 -247546810 + AluSx SINE Alu 1 356 0 1614 205 69 40 chr2 3141178 3141627 -247546227 - MLT1C LTR MaLR -2 465 4 192 320 13 27 chr2 3142232 3142307 -247545547 - L2 LINE L2 -6 3307 3234 356 319 108 55 chr2 3142707 3143400 -247544454 - L1M4 LINE L1 -3218 2928 2199 4339 189 23 51 chr2 3144104 3144977 -247542877 + L1MA9 LINE L1 4940 5771 -541 270 0 0 0 chr2 3144977 3145007 -247542847 + (CA)n Simple_repeat Simple_repeat 1 30 0 4339 189 23 51 chr2 3145007 3145498 -247542356 + L1MA9 LINE L1 5771 6274 -38 428 289 62 57 chr2 3145872 3146242 -247541612 + LTR16A LTR ERVL 74 445 -5 647 320 42 14 chr2 3146248 3146532 -247541322 + HERV16 LTR ERVL 2 293 -4703 980 212 45 37 chr2 3146667 3146936 -247540918 - MLT1D LTR MaLR 0 505 235 572 324 52 0 chr2 3147103 3147316 -247540538 + HERV16 LTR ERVL 457 680 -4316 1769 312 64 18 chr2 3147420 3148691 -247539163 + HERV16 LTR ERVL 869 2293 -3072 396 0 0 0 chr2 3148691 3148735 -247539119 + (TA)n Simple_repeat Simple_repeat 2 45 0 1769 312 64 18 chr2 3148735 3148910 -247538944 + HERV16 LTR ERVL 2293 2458 -2907 618 142 9 9 chr2 3149010 3149116 -247538738 - MSTC LTR MaLR 0 428 323 12668 107 5 1 chr2 3149225 3150984 -247536870 - L1P3 LINE L1 -4676 1775 28 353 159 52 36 chr2 3150984 3151071 -247536783 - MSTB2 LTR MaLR -352 80 1 4444 210 50 1 chr2 3152163 3153143 -247534711 + L1MCa LINE L1 139 1166 -5260 3827 218 24 47 chr2 3153144 3153725 -247534129 + L1MB8 LINE L1 4597 5189 -989 330 24 0 0 chr2 3153725 3153766 -247534088 + L1PA4 LINE L1 6112 6152 -3 3827 218 24 47 chr2 3153766 3154703 -247533151 + L1MB8 LINE L1 5189 6011 -167 2216 78 0 0 chr2 3154703 3154971 -247532883 + AluY SINE Alu 29 296 -15 3827 218 24 47 chr2 3154971 3155121 -247532733 + L1MB8 LINE L1 6011 6163 -15 295 277 97 52 chr2 3155911 3156178 -247531676 - L2 LINE L2 -13 3300 3022 230 217 0 0 chr2 3156599 3156645 -247531209 + MER103 DNA DNA 9 54 -112 28 0 0 0 chr2 3156942 3156970 -247530884 + AT_rich Low_complexity Low_complexity 1 28 0 5222 0 81 0 chr2 3158059 3158302 -247529552 + L1MC2 LINE L1 5106 5325 -1019 5222 131 46 7 chr2 3158302 3159144 -247528710 + L1MC2 LINE L1 5461 6335 -9 5222 0 81 0 chr2 3159144 3159179 -247528675 + L1MC2 LINE L1 5325 6335 -9 435 342 89 3 chr2 3160666 3160982 -247526872 + HERV16 LTR ERVL 2844 3186 -2578 1186 311 69 56 chr2 3161505 3162423 -247525431 + ERVL LTR ERVL 4474 5403 -361 288 289 0 0 chr2 3162429 3162505 -247525349 + L1MC4 LINE L1 6628 6703 -1339 246 271 38 128 chr2 3163487 3163620 -247524234 + L2 LINE L2 3150 3270 -2 215 305 118 37 chr2 3163617 3163804 -247524050 + L2 LINE L2 2183 2384 -930 * 286 311 91 58 chr2 3164277 3164752 -247523102 + L2 LINE L2 2593 3084 -188 265 313 45 36 chr2 3166115 3166227 -247521627 - L2 LINE L2 -19 3253 3141 302 308 0 0 chr2 3166491 3166595 -247521259 + (CA)n Simple_repeat Simple_repeat 1 104 0 187 338 23 45 chr2 3167028 3167161 -247520693 - L2 LINE L2 -5 3267 3138 237 334 88 50 chr2 3167262 3167879 -247519975 - L2 LINE L2 -191 3081 2444 472 292 45 14 chr2 3167884 3168139 -247519715 + L1ME LINE L1 5329 5588 -574 241 258 34 45 chr2 3168398 3168487 -247519367 + L2 LINE L2 3172 3259 -54 198 71 0 0 chr2 3168505 3168533 -247519321 + (TGAA)n Simple_repeat Simple_repeat 2 29 0 2596 116 28 0 chr2 3169770 3170124 -247517730 + THE1B LTR MaLR 1 364 0 265 293 123 0 chr2 3172322 3172428 -247515426 + L2 LINE L2 3185 3303 -10 1310 162 33 114 chr2 3172791 3173125 -247514729 - AluYb8 SINE Alu -9 309 3 782 158 7 34 chr2 3174979 3175125 -247512729 + L1PB4 LINE L1 6013 6154 -2 4005 256 81 36 chr2 3175153 3175724 -247512130 - L1ME LINE L1 -452 5648 5104 2242 127 0 0 chr2 3175724 3176032 -247511822 - AluSg SINE Alu -2 308 1 4005 256 81 36 chr2 3176032 3177756 -247510098 - L1ME LINE L1 -996 5104 3237 291 286 112 0 chr2 3177945 3178043 -247509811 - MER58 DNA MER1_type -93 122 14 362 291 82 43 chr2 3178078 3178494 -247509360 - L1ME LINE L1 -4137 2124 1693 26 98 0 0 chr2 3178499 3178581 -247509273 + AT_rich Low_complexity Low_complexity 1 82 0 1166 287 84 49 chr2 3178590 3179809 -247508045 - L1ME LINE L1 -4582 1679 378 228 135 0 0 chr2 3180079 3180116 -247507738 + (T)n Simple_repeat Simple_repeat 1 37 0 339 324 7 35 chr2 3180675 3180817 -247507037 - MER5A DNA MER1_type -22 167 30 282 247 74 0 chr2 3182313 3182394 -247505460 - L2 LINE L2 -7 3306 3220 333 0 0 0 chr2 3183560 3183597 -247504257 + (TG)n Simple_repeat Simple_repeat 1 37 0 2193 114 0 7 chr2 3184245 3184551 -247503303 - AluSx SINE Alu -8 304 1 1475 286 97 22 chr2 3184985 3186481 -247501373 - L1ME3A LINE L1 -5 6165 4782 2140 113 0 17 chr2 3186481 3186811 -247501043 - AluSx SINE Alu 0 312 1 3398 165 16 40 chr2 3186820 3187486 -247500368 - L1MA8 LINE L1 -17 6274 5625 1475 286 97 22 chr2 3187486 3187624 -247500230 - L1ME3A LINE L1 -1395 4775 4316 773 134 9 0 chr2 3188630 3188742 -247499112 - THE1B LTR MaLR -188 176 64 2640 107 3 0 chr2 3189584 3189947 -247497907 - THE1B LTR MaLR 0 364 1 197 286 29 14 chr2 3190848 3190918 -247496936 + MIR SINE MIR 21 91 -117 232 325 70 38 chr2 3191172 3191329 -247496525 + MIR SINE MIR 82 243 -19 324 264 8 32 chr2 3191461 3191586 -247496268 + (TATATG)n Simple_repeat Simple_repeat 4 125 0 1292 200 50 126 chr2 3191946 3192207 -247495647 + MLT2B1 LTR ERVL 1 280 -134 239 0 0 31 chr2 3192207 3192239 -247495615 + (TTTTC)n Simple_repeat Simple_repeat 2 32 0 1292 200 50 126 chr2 3192239 3192330 -247495524 + MLT2B1 LTR ERVL 280 192 -222 518 15 0 29 chr2 3192330 3192398 -247495456 + (TTTTC)n Simple_repeat Simple_repeat 2 67 0 1292 200 50 126 chr2 3192398 3192603 -247495251 + MLT2B1 LTR ERVL 191 410 -4 23 0 0 29 chr2 3193070 3193090 -247494764 + AT_rich Low_complexity Low_complexity 1 21 -12 1768 155 0 0 chr2 3193090 3193374 -247494480 - AluSg SINE Alu -26 284 1 23 0 0 29 chr2 3193374 3193387 -247494467 + AT_rich Low_complexity Low_complexity 21 33 0 207 69 0 0 chr2 3194218 3194247 -247493607 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 259 367 33 39 chr2 3194931 3195111 -247492743 - L2 LINE L2 0 3272 3094 2229 132 21 34 chr2 3196814 3197194 -247490660 + THE1C LTR MaLR 1 375 0 444 243 33 72 chr2 3197264 3197370 -247490484 - MLT1C LTR MaLR 0 467 358 2500 111 8 3 chr2 3197370 3197723 -247490131 - THE1A LTR MaLR 0 355 1 11399 106 9 5 chr2 3197723 3199297 -247488557 - THE1A-int LTR MaLR 0 1580 1 2580 94 8 3 chr2 3199299 3199650 -247488204 - THE1A LTR MaLR -2 353 1 444 243 33 72 chr2 3199650 3199691 -247488163 - MLT1C LTR MaLR -109 358 322 * 591 162 19 8 chr2 3199686 3199807 -247488047 - MLT1C LTR MaLR -252 138 16 427 213 44 46 chr2 3199981 3200120 -247487734 + L1ME3 LINE L1 6028 6162 0 202 351 57 53 chr2 3200335 3200600 -247487254 - L2 LINE L2 -1 3271 3006 483 221 0 0 chr2 3200686 3200813 -247487041 + (TG)n Simple_repeat Simple_repeat 2 128 0 204 217 67 33 chr2 3202155 3202215 -247485639 - MIR SINE MIR -78 184 123 2305 92 0 0 chr2 3203654 3203959 -247483895 - AluY SINE Alu -6 305 1 2348 113 158 0 chr2 3205223 3205654 -247482200 - LTR19A LTR ERV1 -4 482 1 224 209 75 45 chr2 3207498 3207565 -247480289 - L3 LINE CR1 -123 1454 1386 * 509 286 91 0 chr2 3207553 3207728 -247480126 + MIR SINE MIR 72 262 0 243 237 21 72 chr2 3207758 3207855 -247479999 - L3 LINE CR1 -205 1372 1281 2372 208 19 21 chr2 3207975 3208443 -247479411 - MLT2B1 LTR ERVL -2 518 52 1994 173 59 50 chr2 3208443 3208864 -247478990 - MSTB1 LTR MaLR -2 430 6 255 146 0 0 chr2 3208860 3208901 -247478953 - MLT2B1 LTR ERVL -456 59 19 * 220 312 117 85 chr2 3208906 3209342 -247478512 + L2 LINE L2 1563 2012 -1302 573 252 15 7 chr2 3209396 3209531 -247478323 - MLT1B LTR MaLR 0 390 255 587 322 150 38 chr2 3209992 3210385 -247477469 - L2 LINE L2 -444 2870 2522 1342 243 32 42 chr2 3210385 3210785 -247477069 + MSTD LTR MaLR 1 396 0 587 322 150 38 chr2 3210785 3211435 -247476419 - L2 LINE L2 -792 2522 1710 478 300 19 6 chr2 3211573 3211733 -247476121 + LTR16A LTR ERVL 105 266 -184 180 356 17 69 chr2 3212674 3212848 -247475006 + L2 LINE L2 3149 3313 0 1921 99 11 0 chr2 3214031 3214294 -247473560 - AluSx SINE Alu -5 307 42 201 243 0 0 chr2 3214465 3214502 -247473352 + MIR3 SINE MIR 120 156 -52 254 265 166 13 chr2 3215824 3215929 -247471925 - MIR SINE MIR -46 162 46 182 318 12 24 chr2 3217037 3217122 -247470732 + MIR SINE MIR 63 146 -116 214 282 130 92 chr2 3217812 3217943 -247469911 + MIR SINE MIR 53 188 -74 293 284 23 23 chr2 3219006 3219094 -247468760 + MER5A DNA MER1_type 22 109 -80 225 228 51 165 chr2 3220037 3220195 -247467659 + MIR SINE MIR 80 219 -43 201 196 0 0 chr2 3220472 3220518 -247467336 + (TCCA)n Simple_repeat Simple_repeat 1 46 0 473 250 0 12 chr2 3220571 3220739 -247467115 + (TCCA)n Simple_repeat Simple_repeat 2 167 0 662 211 6 0 chr2 3220770 3220945 -247466909 + (TCCA)n Simple_repeat Simple_repeat 3 178 0 610 248 8 0 chr2 3220994 3221263 -247466591 + (TCCA)n Simple_repeat Simple_repeat 1 271 0 314 304 26 26 chr2 3221333 3221448 -247466406 + MIR3 SINE MIR 94 208 0 462 271 65 7 chr2 3221690 3221845 -247466009 - MIR SINE MIR -60 202 39 23 33 0 0 chr2 3222316 3222346 -247465508 + AT_rich Low_complexity Low_complexity 1 30 0 203 185 0 19 chr2 3222470 3222524 -247465330 + (CA)n Simple_repeat Simple_repeat 1 53 0 270 160 0 0 chr2 3222980 3223030 -247464824 + (CA)n Simple_repeat Simple_repeat 1 50 0 315 312 75 45 chr2 3225314 3225622 -247462232 + L2 LINE L2 1891 2207 -1107 293 358 8 8 chr2 3225942 3226065 -247461789 - MIR SINE MIR -67 141 19 1257 157 138 46 chr2 3229952 3230213 -247457641 - AluJb SINE Alu -25 287 3 2566 111 6 3 chr2 3230672 3231034 -247456820 + THE1B LTR MaLR 2 364 0 229 237 37 89 chr2 3231324 3231459 -247456395 + L1ME LINE L1 5618 5745 -376 358 311 94 32 chr2 3231719 3231996 -247455858 - L1ME LINE L1 -345 5776 5483 2484 242 41 28 chr2 3232110 3232816 -247455038 - L1ME1 LINE L1 -4 6162 5448 1957 123 3 3 chr2 3233392 3233701 -247454153 - AluSx SINE Alu 0 309 1 260 327 109 25 chr2 3234828 3235030 -247452824 - L3 LINE CR1 -348 1229 1011 192 40 0 0 chr2 3235624 3235649 -247452205 + (TCTG)n Simple_repeat Simple_repeat 3 27 0 180 0 0 0 chr2 3235672 3235692 -247452162 + (TCTG)n Simple_repeat Simple_repeat 4 23 0 216 0 0 0 chr2 3235786 3235810 -247452044 + (TCTG)n Simple_repeat Simple_repeat 4 27 0 460 296 24 18 chr2 3236581 3236750 -247451104 + MER5A DNA MER1_type 8 177 -12 234 253 13 25 chr2 3237139 3237218 -247450636 + MER94 DNA DNA 1 78 -56 333 299 16 16 chr2 3237411 3237538 -247450316 + MER94 DNA DNA 1 127 -7 202 274 0 20 chr2 3239102 3239153 -247448701 + GA-rich Low_complexity Low_complexity 2 51 0 459 287 39 60 chr2 3240631 3240913 -247446941 - MLT1J LTR MaLR -235 276 1 188 267 50 0 chr2 3241169 3241229 -247446625 + MIR SINE MIR 53 115 -147 233 146 0 0 chr2 3241524 3241565 -247446289 - MSTB LTR MaLR 0 426 386 2097 76 8 0 chr2 3241567 3241830 -247446024 + AluSq SINE Alu 33 297 -16 321 305 195 0 chr2 3242686 3242804 -247445050 - MER5A DNA MER1_type -3 186 46 678 246 66 6 chr2 3242828 3243011 -247444843 + MER58C DNA MER1_type 21 214 -1 2344 97 3 0 chr2 3243142 3243265 -247444589 + AluSp SINE Alu 1 122 -191 577 0 27 0 chr2 3243265 3243338 -247444516 + (TAAAA)n Simple_repeat Simple_repeat 2 76 0 2344 97 3 0 chr2 3243338 3243513 -247444341 + AluSp SINE Alu 122 300 -13 271 183 29 19 chr2 3243616 3243720 -247444134 + (TAGA)n Simple_repeat Simple_repeat 1 105 0 221 94 47 47 chr2 3243790 3243854 -247444000 + (TAGA)n Simple_repeat Simple_repeat 1 64 0 1099 264 72 14 chr2 3243889 3244305 -247443549 - MER92C LTR ERV1 -8 546 107 289 296 173 37 chr2 3245980 3246142 -247441712 + MER5A DNA MER1_type 4 187 -2 180 274 65 48 chr2 3246844 3246906 -247440948 + MIR3 SINE MIR 107 169 -39 181 256 0 23 chr2 3247244 3247287 -247440567 + L2 LINE L2 3263 3304 -9 1429 178 71 32 chr2 3247474 3247853 -247440001 - Tigger2 DNA MER2_type 0 2718 4 2185 152 33 31 chr2 3247905 3248454 -247439400 - MLT2A2 LTR ERVL 0 554 1 249 98 0 0 chr2 3248844 3248885 -247438969 + (GCTG)n Simple_repeat Simple_repeat 4 44 0 323 319 17 9 chr2 3248948 3249064 -247438790 + MIR SINE MIR 82 198 -64 183 156 0 0 chr2 3250324 3250356 -247437498 + (ATGGTG)n Simple_repeat Simple_repeat 6 37 0 2068 116 141 0 chr2 3250536 3250906 -247436948 - MSTA LTR MaLR 0 428 7 8623 170 37 8 chr2 3250912 3252502 -247435352 - MSTA-int LTR MaLR -14 1637 1 2200 158 94 5 chr2 3252502 3252895 -247434959 - MSTA LTR MaLR 0 428 1 317 333 52 82 chr2 3252895 3253162 -247434692 - L1MEd LINE L1 -4097 2213 1955 5858 138 1 2 chr2 3253172 3254306 -247433548 + L1PA13 LINE L1 5024 6163 0 522 306 113 63 chr2 3254453 3255181 -247432673 - L1MEd LINE L1 -795 1695 928 37 62 0 0 chr2 3255181 3255246 -247432608 + AT_rich Low_complexity Low_complexity 1 65 0 1001 171 57 5 chr2 3255261 3255409 -247432445 - L1MA9 LINE L1 0 6312 6148 294 29 0 0 chr2 3255409 3255444 -247432410 + (TG)n Simple_repeat Simple_repeat 2 36 0 1001 171 57 5 chr2 3255444 3255505 -247432349 - L1MA9 LINE L1 -164 6148 6092 657 209 36 0 chr2 3255515 3255654 -247432200 - FRAM SINE Alu -32 144 1 2306 167 48 74 chr2 3255655 3256215 -247431639 - L1MA9 LINE L1 -201 6111 5567 306 301 195 16 chr2 3256220 3256466 -247431388 - L1MEd LINE L1 -5233 886 597 664 266 112 33 chr2 3257582 3257743 -247430111 - MLT1C LTR MaLR 0 467 320 1260 225 63 42 chr2 3257743 3258121 -247429733 + MLT1B LTR MaLR 5 390 0 664 266 112 33 chr2 3258121 3258364 -247429490 - MLT1C LTR MaLR -147 320 22 203 337 20 41 chr2 3258588 3258686 -247429168 + MIR3 SINE MIR 105 200 -8 193 290 32 32 chr2 3258914 3258976 -247428878 + L2 LINE L2 3232 3293 -20 641 261 78 78 chr2 3260045 3260428 -247427426 + MLT1C LTR MaLR 1 383 -84 325 336 38 0 chr2 3260689 3260820 -247427034 + MIR SINE MIR 118 253 -9 185 324 29 10 chr2 3260936 3261038 -247426816 - MIR SINE MIR -131 131 28 2247 110 10 10 chr2 3261346 3261656 -247426198 - AluSp SINE Alu -3 310 1 227 260 0 60 chr2 3262260 3262360 -247425494 + (CAGG)n Simple_repeat Simple_repeat 3 96 0 354 281 0 62 chr2 3262380 3262558 -247425296 + (CAGG)n Simple_repeat Simple_repeat 2 168 0 441 182 13 7 chr2 3263976 3264130 -247423724 + (CA)n Simple_repeat Simple_repeat 1 155 0 1052 247 115 20 chr2 3264161 3264517 -247423337 + MLT1B LTR MaLR 1 390 0 206 242 15 30 chr2 3265494 3265560 -247422294 + MIR SINE MIR 86 150 -58 197 208 0 130 chr2 3265561 3265638 -247422216 + MER5A DNA MER1_type 33 99 -90 296 333 199 20 chr2 3267094 3267497 -247420357 - L2 LINE L2 -13 3300 2826 252 258 32 11 chr2 3270676 3270769 -247417085 + C-rich Low_complexity Low_complexity 5 99 0 464 79 87 24 chr2 3271300 3271794 -247416060 + (CA)n Simple_repeat Simple_repeat 1 524 0 386 186 48 9 chr2 3271818 3272286 -247415568 + (CA)n Simple_repeat Simple_repeat 1 486 0 253 197 45 0 chr2 3272300 3272366 -247415488 + (CA)n Simple_repeat Simple_repeat 2 70 0 416 143 65 0 chr2 3272385 3272539 -247415315 + (CA)n Simple_repeat Simple_repeat 1 164 0 426 148 63 56 chr2 3272581 3273198 -247414656 + (ATGGTG)n Simple_repeat Simple_repeat 1 621 0 318 185 0 0 chr2 3274420 3274474 -247413380 - MER63 DNA MER1_type -24 1037 984 * 522 175 167 0 chr2 3274472 3274586 -247413268 - MER63 DNA MER1_type -302 760 2 240 281 89 44 chr2 3275193 3275328 -247412526 + L2 LINE L2 3132 3272 0 267 140 0 0 chr2 3275472 3275522 -247412332 + (GGGGA)n Simple_repeat Simple_repeat 2 51 0 261 0 0 0 chr2 3275771 3275800 -247412054 + (CA)n Simple_repeat Simple_repeat 2 30 0 21 36 0 0 chr2 3276986 3277014 -247410840 + AT_rich Low_complexity Low_complexity 1 28 0 222 347 0 0 chr2 3277023 3277095 -247410759 + (CATATA)n Simple_repeat Simple_repeat 6 77 0 697 248 72 33 chr2 3277265 3277572 -247410282 + L1MD2 LINE L1 4965 5283 -863 * 968 285 94 79 chr2 3277570 3277964 -247409890 + L1MD2 LINE L1 5560 5946 -413 2535 87 0 3 chr2 3277964 3278275 -247409579 - AluSx SINE Alu -2 310 1 968 285 94 79 chr2 3278275 3278655 -247409199 + L1MD2 LINE L1 5946 6346 -13 297 255 131 41 chr2 3280946 3281091 -247406763 - MER5B DNA MER1_type -18 160 3 263 259 108 86 chr2 3281113 3281252 -247406602 - MIR SINE MIR -112 150 9 1693 160 10 7 chr2 3282225 3282518 -247405336 + MER49 LTR ERV1 1 294 -629 6660 91 11 0 chr2 3282577 3283687 -247404167 + L1PA10 LINE L1 5046 6164 -4 1373 204 36 24 chr2 3283700 3284033 -247403821 + MER4D LTR ERV1 567 903 0 187 28 56 28 chr2 3285251 3285287 -247402567 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 281 290 133 10 chr2 3285491 3285614 -247402240 - MER5A DNA MER1_type -10 179 27 218 311 125 25 chr2 3285650 3285875 -247401979 + MIR SINE MIR 8 262 0 237 33 0 0 chr2 3286200 3286230 -247401624 + (TG)n Simple_repeat Simple_repeat 2 31 0 1889 181 0 7 chr2 3286452 3286756 -247401098 + AluJb SINE Alu 1 302 -10 230 71 0 0 chr2 3287610 3287638 -247400216 + LTR47A LTR ERVL 4 31 -421 1980 161 130 3 chr2 3287638 3288022 -247399832 + LTR47A LTR ERVL 4 436 -16 18749 168 60 13 chr2 3289330 3293110 -247394744 + L1M1 LINE L1 19 3619 -4105 1011 23 0 38 chr2 3293110 3293241 -247394613 - L1PA6 LINE L1 -7 6147 6022 18749 168 60 13 chr2 3293241 3294167 -247393687 + L1M1 LINE L1 3619 4500 -3224 2171 118 3 0 chr2 3294167 3294473 -247393381 + AluSq SINE Alu 1 307 -6 18749 168 60 13 chr2 3294473 3296420 -247391434 + L1M1 LINE L1 4500 6983 -741 445 241 19 86 chr2 3296443 3296550 -247391304 + MLT1F1 LTR MaLR 407 502 -65 2206 92 0 0 chr2 3296550 3296859 -247390995 - AluSg SINE Alu 0 309 1 445 241 19 86 chr2 3296859 3296912 -247390942 + MLT1F1 LTR MaLR 502 557 -10 353 275 84 41 chr2 3296935 3297156 -247390698 + MIR SINE MIR 20 249 -13 452 335 180 12 chr2 3297786 3298108 -247389746 + L3 LINE CR1 1114 1489 -88 297 310 90 21 chr2 3299752 3299897 -247387957 - MIR SINE MIR -52 210 56 665 256 61 22 chr2 3299930 3300110 -247387744 - MER5A DNA MER1_type -2 187 1 228 86 0 0 chr2 3300652 3300687 -247387167 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1783 195 14 24 chr2 3301525 3301895 -247385959 - MER47A DNA MER2_type 0 366 1 1492 151 3 56 chr2 3301902 3302034 -247385820 + MER2 DNA MER2_type 2 113 -232 1320 199 34 21 chr2 3302034 3302325 -247385529 - AluJb SINE Alu -17 295 1 1492 151 3 56 chr2 3302325 3302476 -247385378 + MER2 DNA MER2_type 113 270 -75 641 327 154 34 chr2 3302591 3303692 -247384162 + L2 LINE L2 1744 2977 -337 2300 106 0 0 chr2 3308064 3308375 -247379479 - AluSx SINE Alu -1 311 1 1357 276 52 30 chr2 3308597 3309057 -247378797 + MLT1J LTR MaLR 23 492 -19 245 300 132 41 chr2 3309082 3309302 -247378552 - L2 LINE L2 -129 3184 2945 378 0 0 0 chr2 3309934 3309976 -247377878 + (CA)n Simple_repeat Simple_repeat 1 42 0 1633 213 20 20 chr2 3309977 3310324 -247377530 + MER7A DNA MER2_type 2 346 0 2429 150 33 17 chr2 3312060 3312479 -247375375 + MSTA LTR MaLR 1 426 -2 410 293 61 50 chr2 3313200 3313296 -247374558 - MIR SINE MIR -19 243 149 2266 84 3 0 chr2 3313296 3313593 -247374261 - AluSp SINE Alu -14 299 2 410 293 61 50 chr2 3313593 3313694 -247374160 - MIR SINE MIR -113 149 44 641 311 48 32 chr2 3315121 3315369 -247372485 + MIR SINE MIR 8 259 -3 391 204 23 11 chr2 3315369 3315457 -247372397 + MLT1A1 LTR MaLR 1 89 -276 269 200 9 29 chr2 3315670 3315775 -247372079 + (TG)n Simple_repeat Simple_repeat 2 104 0 344 242 7 39 chr2 3315800 3316223 -247371631 + (TG)n Simple_repeat Simple_repeat 1 409 0 311 281 149 9 chr2 3317988 3318209 -247369645 + L1ME LINE L1 5097 5348 -798 249 310 120 37 chr2 3318215 3318515 -247369339 + L1ME LINE L1 5368 5692 -429 633 316 24 14 chr2 3318571 3318783 -247369071 - L2 LINE L2 0 3313 3100 237 189 117 99 chr2 3318958 3319069 -247368785 + L1ME4a LINE L1 5973 6085 -36 18364 62 10 17 chr2 3324098 3326420 -247361434 + HERVL LTR ERVL 3105 5410 -244 707 261 123 22 chr2 3326588 3327001 -247360853 - MLT1C LTR MaLR -12 455 1 2093 139 126 23 chr2 3327530 3327918 -247359936 + MSTA LTR MaLR 1 428 0 8332 157 26 51 chr2 3327920 3329539 -247358315 + MSTA-int LTR MaLR 3 1580 0 1604 162 184 11 chr2 3329539 3329904 -247357950 + MSTA LTR MaLR 1 428 0 392 267 18 0 chr2 3331801 3332266 -247355588 + (CA)n Simple_repeat Simple_repeat 1 473 0 233 274 171 17 chr2 3332697 3332814 -247355040 - MIR SINE MIR -5 257 123 201 312 17 0 chr2 3333558 3333651 -247354203 - MIR SINE MIR -56 152 58 401 313 72 6 chr2 3334053 3334219 -247353635 - MIR SINE MIR -33 229 53 3475 216 71 25 chr2 3334549 3335534 -247352320 + L1MC3 LINE L1 6748 7777 -8 2205 104 139 11 chr2 3335656 3336031 -247351823 + MSTA LTR MaLR 6 428 0 794 50 0 0 chr2 3337554 3337655 -247350199 + HERVL-A1 LTR ERVL 5554 5654 0 2575 106 20 40 chr2 3337656 3338108 -247349746 + MLT2A1 LTR ERVL 2 444 0 1901 135 46 0 chr2 3339219 3339501 -247348353 + AluSq SINE Alu 1 295 -18 1030 303 157 35 chr2 3340267 3341128 -247346726 - L2 LINE L2 -1627 1687 722 351 269 23 110 chr2 3341172 3341436 -247346418 - L2 LINE L2 -2764 550 310 2292 74 0 7 chr2 3343088 3343371 -247344483 - AluY SINE Alu -10 301 21 196 337 11 11 chr2 3343646 3343735 -247344119 - L3 LINE CR1 -144 1433 1345 416 298 51 28 chr2 3344277 3344455 -247343399 + MIR SINE MIR 61 242 -20 249 217 16 71 chr2 3345275 3345459 -247342395 + (CA)n Simple_repeat Simple_repeat 1 174 0 392 199 11 72 chr2 3345859 3346040 -247341814 + (CA)n Simple_repeat Simple_repeat 1 170 0 433 274 17 23 chr2 3346078 3346253 -247341601 + (CA)n Simple_repeat Simple_repeat 2 175 0 2263 121 0 3 chr2 3347888 3348194 -247339660 - AluSx SINE Alu -7 305 1 283 258 75 21 chr2 3348896 3348989 -247338865 + MIR SINE MIR 103 200 -62 260 310 34 54 chr2 3352265 3352562 -247335292 - L2 LINE L2 -78 3235 2945 2334 78 29 13 chr2 3352570 3352876 -247334978 + AluY SINE Alu 1 311 0 358 326 228 12 chr2 3352897 3353462 -247334392 - L2 LINE L2 -911 2403 1717 796 262 5 0 chr2 3353966 3354157 -247333697 + MLT1A1 LTR MaLR 172 363 -2 8427 178 30 46 chr2 3354244 3357263 -247330591 + L1MA8 LINE L1 3319 6286 -5 27 0 0 0 chr2 3357264 3357291 -247330563 + AT_rich Low_complexity Low_complexity 1 27 0 290 228 40 40 chr2 3358345 3358446 -247329408 - MER45 DNA AcHobo -1439 142 42 625 169 23 31 chr2 3359267 3359331 -247328523 + MER45A DNA AcHobo 42 105 -1476 2262 115 0 3 chr2 3359331 3359627 -247328227 - AluSq SINE Alu -18 295 1 625 169 23 31 chr2 3359627 3359692 -247328162 + MER45A DNA AcHobo 105 170 -8 233 338 15 0 chr2 3359712 3359780 -247328074 + MIR3 SINE MIR 103 171 -37 287 193 102 45 chr2 3360074 3360162 -247327692 + MIR SINE MIR 108 200 -62 2647 68 0 0 chr2 3360224 3360533 -247327321 - AluY SINE Alu -1 310 2 759 333 36 45 chr2 3360631 3361437 -247326417 + L1MEc LINE L1 388 1186 -5377 3892 181 74 9 chr2 3361438 3362392 -247325462 + L1MB3 LINE L1 5165 6182 -1 423 184 34 54 chr2 3362399 3362546 -247325308 + L1MEc LINE L1 1178 1321 -5242 317 333 78 29 chr2 3362576 3362780 -247325074 + L1MEc LINE L1 1277 1490 -4894 333 283 87 46 chr2 3363063 3363282 -247324572 + L1ME LINE L1 5558 5785 -336 1715 175 0 31 chr2 3363338 3363673 -247324181 - AluJb SINE Alu 0 326 1 207 0 0 0 chr2 3364251 3364274 -247323580 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 21 82 0 0 chr2 3364941 3364990 -247322864 + AT_rich Low_complexity Low_complexity 1 49 0 2621 257 26 57 chr2 3365170 3365237 -247322617 - MER63C DNA MER1_type -138 922 854 2149 125 7 3 chr2 3365237 3365534 -247322320 - AluSq SINE Alu -15 298 1 2621 257 26 57 chr2 3365534 3366189 -247321665 - MER63C DNA MER1_type -206 854 233 710 208 19 19 chr2 3366189 3366348 -247321506 - L1MC1 LINE L1 0 6333 6175 2621 257 26 57 chr2 3366348 3366571 -247321283 - MER63C DNA MER1_type -827 233 5 294 73 0 0 chr2 3366793 3366834 -247321020 + (TTGG)n Simple_repeat Simple_repeat 2 42 0 219 286 52 45 chr2 3366893 3367047 -247320807 + L2 LINE L2 2898 3052 -220 1698 264 146 26 chr2 3367686 3368014 -247319840 - L1ME3A LINE L1 -1 6169 5882 4277 101 28 2 chr2 3368014 3368657 -247319197 - MER4A LTR ERV1 -2 662 3 1698 264 146 26 chr2 3368657 3369181 -247318673 - L1ME3A LINE L1 -288 5882 5187 302 313 76 8 chr2 3369298 3369429 -247318425 - MIR SINE MIR -91 171 32 256 289 19 48 chr2 3369748 3369852 -247318002 - L2 LINE L2 -95 3218 3118 200 258 17 146 chr2 3369884 3370062 -247317792 - L2 LINE L2 -201 3071 2917 409 261 112 63 chr2 3370126 3370599 -247317255 + MLT1H LTR MaLR 4 540 -9 351 113 0 0 chr2 3370691 3370744 -247317110 + (T)n Simple_repeat Simple_repeat 1 53 0 205 324 0 0 chr2 3371061 3371135 -247316719 + (CCCA)n Simple_repeat Simple_repeat 2 75 0 1482 326 163 17 chr2 3371135 3372397 -247315457 + L2 LINE L2 1478 2923 -391 2647 71 0 0 chr2 3372397 3372707 -247315147 + AluY SINE Alu 1 310 -1 209 269 171 23 chr2 3373929 3374104 -247313750 + L2 LINE L2 3113 3313 0 241 267 58 12 chr2 3375430 3375516 -247312338 - MIR SINE MIR -68 140 51 267 143 0 0 chr2 3375656 3375698 -247312156 - 5S rRNA rRNA -79 42 1 410 177 13 0 chr2 3375962 3376041 -247311813 + MADE1 DNA Mariner 1 80 0 192 125 0 0 chr2 3376175 3376207 -247311647 + (TTTTC)n Simple_repeat Simple_repeat 4 35 0 231 173 0 0 chr2 3376370 3376422 -247311432 + (CA)n Simple_repeat Simple_repeat 1 52 0 227 143 41 0 chr2 3376552 3376601 -247311253 + A-rich Low_complexity Low_complexity 2 52 0 191 234 64 0 chr2 3378696 3378743 -247309111 - L2 LINE L2 -11 3302 3253 1617 182 23 28 chr2 3378792 3379144 -247308710 - L1MB2 LINE L1 0 6171 5822 355 194 0 0 chr2 3379151 3379223 -247308631 - L1MB2 LINE L1 -666 5517 5446 219 358 0 0 chr2 3380057 3380138 -247307716 + MIR SINE MIR 56 136 -72 23 0 0 0 chr2 3380894 3380917 -247306937 + AT_rich Low_complexity Low_complexity 1 23 0 267 342 43 0 chr2 3384684 3384801 -247303053 - MIR SINE MIR -108 154 33 2314 114 0 0 chr2 3385064 3385363 -247302491 - AluSg SINE Alu -11 299 1 421 208 37 34 chr2 3385562 3385884 -247301970 + (TG)n Simple_repeat Simple_repeat 1 323 0 1010 282 59 9 chr2 3386116 3386538 -247301316 - L1MB2 LINE L1 -1213 4933 4491 909 321 23 19 chr2 3386557 3387034 -247300820 - L1MB2 LINE L1 -2318 3828 3350 303 316 83 30 chr2 3387051 3387184 -247300670 - L1MB2 LINE L1 -3895 2251 2112 1118 279 113 33 chr2 3387196 3387683 -247300171 - LTR41 LTR ERVL -15 758 233 890 275 93 7 chr2 3387798 3388089 -247299765 - LTR41 LTR ERVL -457 316 1 2576 78 28 11 chr2 3388203 3388561 -247299293 - L1PA8 LINE L1 -13 6159 5796 544 324 105 42 chr2 3388845 3389342 -247298512 - L1MEc LINE L1 -4431 2150 1544 2057 126 7 0 chr2 3389342 3389651 -247298203 - AluSx SINE Alu -1 311 1 544 324 105 42 chr2 3389651 3389924 -247297930 - L1MEc LINE L1 -5037 1544 1290 1213 219 33 91 chr2 3390516 3390566 -247297288 + MLT1A2 LTR MaLR 1 52 -322 2211 102 0 7 chr2 3390566 3390869 -247296985 - AluSq SINE Alu 0 313 13 1213 219 33 91 chr2 3390869 3391215 -247296639 + MLT1A2 LTR MaLR 52 374 0 211 286 95 29 chr2 3393587 3393692 -247294162 + MIR3 SINE MIR 49 160 -48 23 0 0 0 chr2 3394006 3394029 -247293825 + AT_rich Low_complexity Low_complexity 1 23 0 317 235 88 0 chr2 3394029 3394131 -247293723 - L1MA9 LINE L1 -22 6290 6180 1700 205 57 8 chr2 3394137 3394415 -247293439 - L1MA9 LINE L1 -235 6077 5775 225 83 0 0 chr2 3394415 3394451 -247293403 + (TG)n Simple_repeat Simple_repeat 1 36 0 1700 205 57 8 chr2 3394451 3394542 -247293312 - L1MA9 LINE L1 -537 5775 5690 312 153 53 38 chr2 3395114 3395245 -247292609 + (AGTTG)n Simple_repeat Simple_repeat 3 135 0 1201 240 53 120 chr2 3395420 3396025 -247291829 - MLT1E1 LTR MaLR 0 637 92 189 340 20 30 chr2 3396308 3396408 -247291446 - MIR SINE MIR -62 146 48 2114 122 0 10 chr2 3396677 3396981 -247290873 - AluSx SINE Alu -9 303 3 279 322 0 11 chr2 3398413 3398500 -247289354 + MIR3 SINE MIR 117 202 -6 487 157 24 0 chr2 3398528 3398611 -247289243 - L1MB5 LINE L1 -12 6162 6078 1444 136 9 5 chr2 3400449 3400669 -247287185 + AluSq SINE Alu 71 291 -22 899 248 17 8 chr2 3401153 3401387 -247286467 + MLT1D LTR MaLR 7 242 -263 473 311 54 11 chr2 3402185 3402445 -247285409 - MER90 LTR ERV1 -210 404 134 216 200 0 0 chr2 3402844 3402909 -247284945 + GA-rich Low_complexity Low_complexity 2 66 0 184 79 48 48 chr2 3404298 3404361 -247283493 + (CAA)n Simple_repeat Simple_repeat 3 65 0 292 205 26 45 chr2 3404361 3404517 -247283337 + (CACAC)n Simple_repeat Simple_repeat 1 153 0 207 62 62 31 chr2 3404553 3404618 -247283236 + (CACAA)n Simple_repeat Simple_repeat 5 71 0 224 130 48 48 chr2 3404729 3404875 -247282979 + (CACAA)n Simple_repeat Simple_repeat 2 147 0 285 255 157 24 chr2 3405787 3406024 -247281830 + MLT1J1 LTR MaLR 19 296 -154 196 298 48 48 chr2 3406528 3406632 -247281222 + L2 LINE L2 3208 3311 -2 201 313 12 0 chr2 3407033 3407113 -247280741 - MIR SINE MIR 0 262 182 197 358 0 15 chr2 3407124 3407191 -247280663 - MIR SINE MIR -181 81 16 1519 197 122 22 chr2 3408190 3408550 -247279304 - MSTD LTR MaLR 0 396 1 852 108 7 40 chr2 3409787 3409935 -247277919 - FLAM_C SINE Alu 0 143 1 962 156 6 19 chr2 3410163 3410323 -247277531 + L1PA8A LINE L1 5971 6128 -3 1589 277 47 38 chr2 3410832 3411409 -247276445 + MLT1E LTR MaLR 10 591 -2 368 265 0 6 chr2 3413885 3414055 -247273799 + C-rich Low_complexity Low_complexity 4 172 0 294 138 50 12 chr2 3414058 3414138 -247273716 + CT-rich Low_complexity Low_complexity 3 85 0 2072 137 42 31 chr2 3414218 3414577 -247273277 + THE1B LTR MaLR 1 363 -1 250 242 30 0 chr2 3414941 3415007 -247272847 + L2 LINE L2 2987 3054 -218 191 244 22 0 chr2 3415073 3415118 -247272736 + L2 LINE L2 3223 3268 -4 375 289 97 50 chr2 3417115 3417496 -247270358 + HAL1 LINE L1 1 399 -2108 1057 222 31 13 chr2 3417837 3418062 -247269792 - MER101B LTR ERV1 -341 229 1 374 366 79 9 chr2 3418075 3418403 -247269451 + HAL1 LINE L1 491 841 -1666 461 205 252 0 chr2 3419147 3419264 -247268590 + MLT2D LTR ERVL 226 312 -102 198 0 0 0 chr2 3419264 3419286 -247268568 + (TC)n Simple_repeat Simple_repeat 1 22 0 461 205 252 0 chr2 3419286 3419319 -247268535 + MLT2D LTR ERVL 312 414 0 471 240 0 0 chr2 3420243 3420339 -247267515 - L1MA7 LINE L1 -186 6105 6010 629 183 41 41 chr2 3420342 3420511 -247267343 + L1MA7 LINE L1 6123 6291 0 198 209 47 0 chr2 3421131 3421174 -247266680 - MIR SINE MIR -111 151 107 249 326 38 15 chr2 3422566 3422698 -247265156 + L1ME LINE L1 5634 5768 -353 2303 102 0 6 chr2 3422935 3423249 -247264605 + AluSx SINE Alu 1 312 0 254 284 69 35 chr2 3423715 3423831 -247264023 + MIR3 SINE MIR 62 181 -27 193 231 123 15 chr2 3425147 3425212 -247262642 - MIR SINE MIR -118 144 73 216 0 0 0 chr2 3426706 3426730 -247261124 + (GGATG)n Simple_repeat Simple_repeat 3 26 0 306 287 189 14 chr2 3427260 3427403 -247260451 - MIR SINE MIR 0 262 95 774 244 114 36 chr2 3428805 3429112 -247258742 + MLT1D LTR MaLR 47 377 -128 192 195 0 24 chr2 3430018 3430059 -247257795 + MIR SINE MIR 33 72 -136 189 107 0 0 chr2 3430566 3430594 -247257260 + (TC)n Simple_repeat Simple_repeat 2 29 0 319 355 112 0 chr2 3432078 3432247 -247255607 - MIR SINE MIR -19 243 56 364 252 37 0 chr2 3432385 3432492 -247255362 + LTR33 LTR ERVL 101 211 -310 2188 92 3 0 chr2 3433744 3434038 -247253816 - AluSx SINE Alu -17 295 1 324 358 0 15 chr2 3435459 3435593 -247252261 - MER94 DNA DNA -2 132 1 222 343 59 20 chr2 3435875 3435977 -247251877 + L2 LINE L2 2948 3053 -219 227 375 36 27 chr2 3437769 3437881 -247249973 - L2 LINE L2 -18 3254 3142 360 0 0 0 chr2 3438083 3438123 -247249731 + (CA)n Simple_repeat Simple_repeat 1 40 0 234 0 0 0 chr2 3438122 3438148 -247249706 + (GA)n Simple_repeat Simple_repeat 2 27 0 * 220 356 134 18 chr2 3438526 3439079 -247248775 + L2 LINE L2 2325 2941 -373 187 185 160 76 chr2 3439247 3439366 -247248488 + L2 LINE L2 3137 3265 -7 250 226 11 113 chr2 3439723 3439909 -247247945 + GA-rich Low_complexity Low_complexity 5 171 0 224 255 246 0 chr2 3441314 3441433 -247246421 - MIR SINE MIR -65 143 41 21 0 0 0 chr2 3441708 3441729 -247246125 + AT_rich Low_complexity Low_complexity 1 21 0 240 297 63 51 chr2 3442702 3442877 -247244977 - MIR SINE MIR -6 256 80 237 394 32 7 chr2 3443289 3443444 -247244410 - L2 LINE L2 -599 2715 2557 350 289 0 0 chr2 3443457 3443540 -247244314 + L2 LINE L2 3189 3271 -1 206 223 0 109 chr2 3443992 3444185 -247243669 + C-rich Low_complexity Low_complexity 5 176 0 218 230 0 102 chr2 3444387 3444583 -247243271 + C-rich Low_complexity Low_complexity 2 177 0 252 208 18 83 chr2 3444666 3444834 -247243020 + C-rich Low_complexity Low_complexity 2 158 0 741 230 73 0 chr2 3444968 3445133 -247242721 - MER5B DNA MER1_type -1 177 1 1611 235 40 6 chr2 3447003 3447356 -247240498 - MLT1A1 LTR MaLR 0 365 1 738 323 126 41 chr2 3447489 3448468 -247239386 + L2 LINE L2 206 1267 -2047 236 298 50 16 chr2 3448471 3448592 -247239262 + L2 LINE L2 1581 1705 -1609 625 197 16 0 chr2 3448739 3448866 -247238988 + L1MC2 LINE L1 6215 6343 -1 571 269 84 52 chr2 3449880 3450361 -247237493 - MLT1H1 LTR MaLR 0 555 62 1046 132 44 11 chr2 3450624 3450938 -247236916 + THE1C LTR MaLR 1 375 0 10524 126 17 14 chr2 3450938 3452513 -247235341 + THE1C-int LTR MaLR 1 1580 0 1065 127 78 11 chr2 3452513 3452817 -247235037 + THE1C LTR MaLR 1 375 0 242 292 67 0 chr2 3452863 3452952 -247234902 - LTR16A LTR ERVL -260 190 96 276 330 19 0 chr2 3453331 3453437 -247234417 - HERV16 LTR ERVL -3575 1421 1314 212 209 0 0 chr2 3454441 3454484 -247233370 - L3 LINE CR1 -124 1453 1411 318 301 66 22 chr2 3454582 3454765 -247233089 - LTR16A LTR ERVL -93 357 167 359 200 42 11 chr2 3454820 3454915 -247232939 + L1MD3 LINE L1 7898 7995 0 236 310 159 7 chr2 3455600 3455745 -247232109 + MIR SINE MIR 14 180 -82 1711 193 171 8 chr2 3456027 3456395 -247231459 + MSTA LTR MaLR 1 428 0 467 297 31 0 chr2 3458039 3458167 -247229687 + MIR3 SINE MIR 72 203 -5 943 233 43 4 chr2 3458461 3458693 -247229161 - MLT1E LTR MaLR -9 584 344 413 295 63 16 chr2 3458780 3458970 -247228884 - MLT1E LTR MaLR -394 199 1 320 300 131 31 chr2 3459051 3459471 -247228383 - L2 LINE L2 -365 2949 2488 188 228 88 35 chr2 3459858 3459915 -247227939 + L2 LINE L2 3206 3265 -7 1272 270 91 0 chr2 3462651 3462969 -247224885 + MER7A DNA MER2_type 1 345 -1 332 303 0 64 chr2 3466939 3467179 -247220675 + C-rich Low_complexity Low_complexity 1 224 0 307 77 19 0 chr2 3468779 3468831 -247219023 - AluSx SINE Alu 0 301 249 1181 135 65 0 chr2 3468831 3469016 -247218838 - AluSx SINE Alu -115 197 1 349 307 50 14 chr2 3469521 3469661 -247218193 + MIR SINE MIR 5 149 -113 2080 259 39 74 chr2 3470617 3471027 -247216827 + MER21B LTR ERV1 1 373 -490 2354 111 39 28 chr2 3471027 3471387 -247216467 - THE1B LTR MaLR 0 364 1 2080 259 39 74 chr2 3471387 3471742 -247216112 + MER21B LTR ERV1 373 739 -124 315 271 243 11 chr2 3472868 3473045 -247214809 - MIR SINE MIR 0 262 45 250 352 19 0 chr2 3475489 3475594 -247212260 + MIR SINE MIR 31 137 -71 2200 151 8 30 chr2 3476332 3476704 -247211150 - THE1B LTR MaLR 0 364 1 302 353 131 20 chr2 3476762 3477359 -247210495 + L2 LINE L2 2047 2709 -605 2297 220 59 108 chr2 3477563 3477648 -247210206 + L1MC4 LINE L1 6460 6548 -1447 2166 91 10 3 chr2 3477648 3477946 -247209908 + AluSq SINE Alu 1 300 -13 2297 220 59 108 chr2 3477946 3479167 -247208687 + L1MC4 LINE L1 6548 7757 -238 210 267 0 0 chr2 3481307 3481352 -247206502 + (TATG)n Simple_repeat Simple_repeat 1 45 0 640 308 125 70 chr2 3482372 3482440 -247205414 + L1MEc LINE L1 1353 1416 -4971 2382 59 3 7 chr2 3482440 3482744 -247205110 + AluY SINE Alu 1 303 -8 640 308 125 70 chr2 3482744 3483105 -247204749 + L1MEc LINE L1 1416 1756 -4631 2122 200 42 9 chr2 3483105 3483535 -247204319 + LTR56 LTR ERV1 1 444 -1 640 308 125 70 chr2 3483535 3484172 -247203682 + L1MEc LINE L1 1756 2479 -3908 367 313 101 54 chr2 3484360 3484638 -247203216 + L1MEc LINE L1 2666 2956 -3259 36 53 0 0 chr2 3484883 3484940 -247202914 + AT_rich Low_complexity Low_complexity 1 57 0 466 295 122 73 chr2 3484942 3485352 -247202502 + L1MEc LINE L1 2990 3419 -2796 255 280 40 0 chr2 3485352 3485427 -247202427 + Tigger6 DNA MER2_type 1 78 -1519 232 286 71 0 chr2 3486843 3486955 -247200899 + MLT1L LTR MaLR 163 282 -333 254 242 0 77 chr2 3487118 3487209 -247200645 - L1MC4 LINE L1 -1341 6701 6618 1106 128 6 17 chr2 3487232 3487412 -247200442 + AluSg/x SINE Alu 135 312 0 318 269 21 21 chr2 3487625 3487718 -247200136 - L1MC4 LINE L1 -2643 5399 5307 2224 86 0 10 chr2 3487725 3488027 -247199827 - AluY SINE Alu -12 299 1 42 65 0 0 chr2 3488210 3488287 -247199567 + AT_rich Low_complexity Low_complexity 1 77 0 185 164 0 36 chr2 3489110 3489165 -247198689 + (TTA)n Simple_repeat Simple_repeat 2 54 0 208 264 83 0 chr2 3489822 3489894 -247197960 + MIR SINE MIR 127 204 -58 2086 141 141 5 chr2 3489979 3490355 -247197499 - MSTA LTR MaLR 0 428 2 1381 272 87 90 chr2 3490409 3492091 -247195763 - HAL1 LINE L1 0 2507 830 309 169 0 0 chr2 3492102 3492161 -247195693 + (TCCA)n Simple_repeat Simple_repeat 2 60 0 1966 184 46 90 chr2 3492161 3492661 -247195193 + MLT2B1 LTR ERVL 2 479 -41 218 202 40 40 chr2 3492661 3492758 -247195096 + (TA)n Simple_repeat Simple_repeat 2 101 -24 1231 168 26 17 chr2 3492758 3492990 -247194864 - MER46A DNA MER2_type 0 236 3 218 202 40 40 chr2 3492990 3493016 -247194838 + (TA)n Simple_repeat Simple_repeat 100 125 0 1391 59 0 0 chr2 3493069 3493239 -247194615 + LTR9 LTR ERV1 3 172 -440 395 229 4 88 chr2 3493241 3493454 -247194400 + L1MC4 LINE L1 6538 6646 -1139 393 269 0 23 chr2 3493440 3493572 -247194282 + L1MC4 LINE L1 6571 6646 -1139 * 359 281 0 44 chr2 3493527 3493641 -247194213 - L1MC4 LINE L1 -1323 6719 6611 * 374 271 21 10 chr2 3493595 3493691 -247194163 + L1MC4 LINE L1 6613 6709 -1333 358 259 8 76 chr2 3493625 3493756 -247194098 - L1MC4 LINE L1 -1333 6709 6588 * 342 273 0 30 chr2 3493737 3493836 -247194018 - L1MC4 LINE L1 -1333 6709 6614 * 217 214 0 0 chr2 3493852 3493928 -247193926 + (TG)n Simple_repeat Simple_repeat 1 76 0 258 61 0 0 chr2 3493938 3493971 -247193883 + MLT2C1 LTR ERVL 360 392 -5 224 167 21 0 chr2 3493980 3494028 -247193826 + (TCTA)n Simple_repeat Simple_repeat 1 49 0 3544 151 28 12 chr2 3494149 3494751 -247193103 - LTR9 LTR ERV1 0 612 1 239 273 79 43 chr2 3495174 3495313 -247192541 - HAL1 LINE L1 -2363 144 1 1955 128 0 23 chr2 3495688 3495994 -247191860 - AluSx SINE Alu -13 299 1 249 294 98 21 chr2 3496990 3497133 -247190721 - MER103 DNA DNA -2 164 11 207 333 23 0 chr2 3497362 3497449 -247190405 + CT-rich Low_complexity Low_complexity 2 90 0 2011 123 13 13 chr2 3497600 3497910 -247189944 + L1PA13 LINE L1 5546 5855 -308 1261 229 14 8 chr2 3497898 3498269 -247189585 + L1MB7 LINE L1 2824 3196 -2950 * 5122 133 3 1 chr2 3498268 3499673 -247188181 + L1PA12 LINE L1 4577 5984 -184 2063 170 25 0 chr2 3499673 3500037 -247187817 - L1M4 LINE L1 -483 5701 5329 1366 73 28 0 chr2 3500043 3500221 -247187633 + L1PA12 LINE L1 5985 6167 -1 352 176 46 183 chr2 3500222 3500287 -247187567 + L1MB7 LINE L1 4303 4337 -1809 2675 92 20 52 chr2 3500287 3500731 -247187123 - L1PB1 LINE L1 -3 6148 5719 352 176 46 183 chr2 3500731 3500818 -247187036 + L1MB7 LINE L1 4337 4434 -1712 3786 197 33 19 chr2 3500842 3501855 -247185999 + L1MB7 LINE L1 5102 6126 -58 1136 231 45 6 chr2 3501869 3502181 -247185673 - L1MA9 LINE L1 -38 6274 5951 2652 179 5 0 chr2 3502189 3502635 -247185219 - L1PA16 LINE L1 -4 6162 5715 1597 77 9 18 chr2 3502735 3502957 -247184897 - L1P LINE L1 -5926 220 1 * 4933 215 66 25 chr2 3502956 3504713 -247183141 - L1MDa LINE L1 -4536 2004 21 452 298 116 30 chr2 3504739 3504937 -247182917 - MIR SINE MIR -43 219 5 201 344 73 21 chr2 3504934 3505030 -247182824 + L2 LINE L2 3207 3307 -6 * 1869 142 14 3 chr2 3505321 3505616 -247182238 + AluSx SINE Alu 1 298 -14 654 250 95 20 chr2 3505769 3505969 -247181885 + MIR SINE MIR 9 223 -39 3231 38 0 0 chr2 3505970 3506564 -247181290 - L1P2 LINE L1 -570 5584 4991 381 57 19 0 chr2 3506564 3506609 -247181245 + L1PA6 LINE L1 6096 6149 -5 2444 187 17 15 chr2 3507199 3507660 -247180194 - MLT1C LTR MaLR 0 467 6 1964 121 10 3 chr2 3512140 3512429 -247175425 + AluSq SINE Alu 2 292 -21 1014 153 178 4 chr2 3512442 3512597 -247175257 + L1MC2 LINE L1 6057 6184 -160 180 0 0 0 chr2 3512597 3512617 -247175237 + (TG)n Simple_repeat Simple_repeat 1 20 0 1014 153 178 4 chr2 3512617 3512697 -247175157 + L1MC2 LINE L1 6184 6333 -11 575 205 45 39 chr2 3513067 3513223 -247174631 - MLT1D LTR MaLR -335 170 14 303 333 88 13 chr2 3513483 3513642 -247174212 + MIR SINE MIR 92 262 0 619 294 58 20 chr2 3513786 3514078 -247173776 - L1MC4a LINE L1 -201 7607 7305 384 22 0 0 chr2 3516025 3516070 -247171784 + (TG)n Simple_repeat Simple_repeat 2 46 0 * 441 0 0 0 chr2 3516069 3516118 -247171736 + (TA)n Simple_repeat Simple_repeat 1 49 0 233 326 52 22 chr2 3516451 3516586 -247171268 - LTR16A1 LTR ERVL 0 457 319 234 0 0 0 chr2 3517038 3517064 -247170790 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 4915 42 2 0 chr2 3517792 3518370 -247169484 + L1PA5 LINE L1 5576 6154 0 2021 117 0 0 chr2 3519866 3520172 -247167682 + AluSx SINE Alu 1 306 0 287 287 116 31 chr2 3520208 3520337 -247167517 + MIR SINE MIR 1 140 -122 219 363 66 0 chr2 3520827 3520918 -247166936 - MIR SINE MIR -115 147 51 273 286 55 11 chr2 3523635 3523726 -247164128 + L2 LINE L2 3162 3256 -16 1515 265 94 21 chr2 3526992 3527509 -247160345 - MER82 DNA MER2_type 0 653 99 1491 232 78 5 chr2 3527509 3527854 -247160000 + MLT2D LTR ERVL 1 378 -36 342 0 0 0 chr2 3527854 3527892 -247159962 + (CA)n Simple_repeat Simple_repeat 2 39 0 1491 232 78 5 chr2 3527892 3527930 -247159924 + MLT2D LTR ERVL 378 412 -2 437 162 0 27 chr2 3527930 3528004 -247159850 - MER82 DNA MER2_type -552 101 30 189 169 102 34 chr2 3530881 3530940 -247156914 + MIR SINE MIR 91 153 -55 344 301 18 26 chr2 3531269 3531382 -247156472 + MIR SINE MIR 21 132 -76 503 227 120 7 chr2 3531507 3531657 -247156197 + MER58B DNA MER1_type 172 338 -3 215 233 0 14 chr2 3533306 3533379 -247154475 + GA-rich Low_complexity Low_complexity 1 72 0 680 179 6 28 chr2 3533397 3533576 -247154278 + GA-rich Low_complexity Low_complexity 1 175 0 332 295 93 27 chr2 3533894 3534077 -247153777 - MLT1J1 LTR MaLR -16 430 236 373 358 18 0 chr2 3534110 3534275 -247153579 - MLT1J2 LTR MaLR -279 171 4 2573 103 22 8 chr2 3534326 3534684 -247153170 + THE1B LTR MaLR 1 363 -1 13040 119 18 6 chr2 3535035 3537083 -247150771 - Tigger1 DNA MER2_type 0 2418 346 194 291 0 0 chr2 3537743 3537798 -247150056 - L2 LINE L2 -575 2739 2685 335 228 79 59 chr2 3539726 3539827 -247148027 - L1ME4a LINE L1 -12 6109 6007 347 350 55 14 chr2 3540431 3540648 -247147206 - MIR SINE MIR -15 247 22 280 229 16 0 chr2 3541715 3541776 -247146078 + L2 LINE L2 2998 3059 -213 188 323 0 0 chr2 3541944 3542006 -247145848 + L2 LINE L2 3187 3248 -24 233 353 8 8 chr2 3542021 3542140 -247145714 + MLT1E LTR MaLR 44 162 -431 244 233 41 0 chr2 3542174 3542247 -247145607 + MLT1E LTR MaLR 431 506 -87 215 324 65 88 chr2 3542463 3542633 -247145221 + MIR SINE MIR 1 166 -96 271 298 67 0 chr2 3542639 3542743 -247145111 - L2 LINE L2 -8 3264 3154 3592 14 0 10 chr2 3544224 3544668 -247143186 - L1PA2 LINE L1 0 6155 5747 4075 8 0 0 chr2 3544668 3545144 -247142710 + L1PA2 LINE L1 5279 5754 -401 248 318 131 0 chr2 3545707 3545814 -247142040 + MIR SINE MIR 33 153 -55 268 271 10 165 chr2 3546217 3546612 -247141242 - L2 LINE L2 -80 3233 2900 204 329 0 14 chr2 3546601 3546674 -247141180 + L2 LINE L2 3242 3313 0 * 2615 62 0 0 chr2 3546677 3546985 -247140869 - AluY SINE Alu -3 308 1 309 269 168 30 chr2 3547040 3547207 -247140647 - L2 LINE L2 -493 2821 2632 264 156 0 0 chr2 3547319 3547364 -247140490 + L1PA16 LINE L1 6121 6165 -1 5686 250 58 45 chr2 3547660 3548135 -247139719 + L1MB1 LINE L1 1182 1649 -4755 19332 45 0 1 chr2 3548135 3551286 -247136568 - L1PA5 LINE L1 -4 6150 3001 5686 250 58 45 chr2 3551286 3551427 -247136427 + L1MB1 LINE L1 1649 1787 -4617 180 0 0 0 chr2 3551427 3551447 -247136407 + (CA)n Simple_repeat Simple_repeat 1 20 0 5686 250 58 45 chr2 3551447 3553424 -247134430 + L1MB1 LINE L1 1787 3736 -2668 664 122 0 0 chr2 3553424 3553514 -247134340 + AluJ/FLAM SINE Alu 13 102 -210 676 200 0 16 chr2 3553521 3553646 -247134208 + FRAM SINE Alu 53 175 -1 5686 250 58 45 chr2 3553646 3556149 -247131705 + L1MB1 LINE L1 3741 6402 -2 3671 201 57 103 chr2 3556172 3556951 -247130903 - MLT1B-int LTR MaLR -125 1246 551 2722 123 0 5 chr2 3556951 3557359 -247130495 - L1PA13 LINE L1 0 6163 5758 3671 201 57 103 chr2 3557359 3557886 -247129968 - MLT1B-int LTR MaLR -820 551 1 1596 188 48 10 chr2 3557886 3558258 -247129596 - MLT1B LTR MaLR 0 467 1 509 239 5 0 chr2 3558272 3558495 -247129359 + (TG)n Simple_repeat Simple_repeat 1 224 0 190 366 46 7 chr2 3558522 3558675 -247129179 - L2 LINE L2 -1364 1950 1792 252 243 14 0 chr2 3559307 3559381 -247128473 + HAL1 LINE L1 2322 2396 -111 208 254 42 14 chr2 3560810 3560881 -247126973 + L3 LINE CR1 1349 1421 -156 214 356 57 26 chr2 3561295 3561489 -247126365 + L3 LINE CR1 1244 1443 -134 311 282 36 45 chr2 3561941 3562051 -247125803 + MIR SINE MIR 38 146 -62 425 315 56 28 chr2 3562620 3562798 -247125056 - MIR SINE MIR -6 256 74 780 271 199 14 chr2 3562906 3563323 -247124531 + MLT1D LTR MaLR 2 495 -10 295 302 232 23 chr2 3563383 3563853 -247124001 + L2 LINE L2 2172 2739 -575 743 203 96 12 chr2 3564209 3564517 -247123337 + MSTD LTR MaLR 6 395 -1 294 293 95 26 chr2 3564520 3564636 -247123218 + L2 LINE L2 3188 3311 -2 337 356 10 0 chr2 3564663 3564767 -247123087 - MIR SINE MIR -99 163 59 701 329 109 22 chr2 3565443 3565939 -247121915 - MLT1G LTR MaLR 0 590 52 1905 181 35 46 chr2 3566001 3566432 -247121422 - MSTC LTR MaLR 0 428 3 1320 198 32 0 chr2 3566458 3566741 -247121113 - MLT1B LTR MaLR -19 371 80 210 184 20 0 chr2 3570126 3570175 -247117679 + (CA)n Simple_repeat Simple_repeat 1 50 0 294 95 0 0 chr2 3572283 3572325 -247115529 + (GA)n Simple_repeat Simple_repeat 1 42 0 429 54 0 0 chr2 3572609 3572665 -247115189 + (TGGA)n Simple_repeat Simple_repeat 2 57 0 266 316 0 0 chr2 3572921 3573000 -247114854 + (CA)n Simple_repeat Simple_repeat 2 80 0 630 215 47 29 chr2 3574866 3575038 -247112816 + MLT1A1 LTR MaLR 1 175 -190 2225 207 38 47 chr2 3575070 3575646 -247112208 + MLT1A1-int LTR MaLR 142 712 -1023 407 206 19 77 chr2 3575845 3576000 -247111854 + MLT1A1-int LTR MaLR 973 1118 -617 * 1169 212 141 96 chr2 3575993 3576441 -247111413 + MLT1A1-int LTR MaLR 1268 1735 0 787 231 5 39 chr2 3576441 3576644 -247111210 + MLT1A1 LTR MaLR 1 196 -169 930 221 20 0 chr2 3576662 3576861 -247110993 + MLT1A1 LTR MaLR 161 363 -2 1856 118 82 25 chr2 3578140 3578495 -247109359 - THE1C LTR MaLR 0 375 1 420 72 40 59 chr2 3580895 3581047 -247106807 + (CA)n Simple_repeat Simple_repeat 2 150 0 201 184 48 39 chr2 3581050 3581153 -247106701 + (CACAC)n Simple_repeat Simple_repeat 4 107 0 268 103 52 31 chr2 3581156 3581253 -247106601 + (CA)n Simple_repeat Simple_repeat 1 99 0 207 213 0 21 chr2 3581463 3581510 -247106344 + CT-rich Low_complexity Low_complexity 1 46 0 412 198 16 59 chr2 3581661 3581935 -247105919 + GA-rich Low_complexity Low_complexity 1 262 0 200 237 68 0 chr2 3582259 3582318 -247105536 + CT-rich Low_complexity Low_complexity 4 66 0 192 354 21 10 chr2 3584195 3584291 -247103563 + L2 LINE L2 2666 2762 -552 835 249 40 57 chr2 3584540 3584894 -247102960 + MLT1B LTR MaLR 18 365 -25 577 205 22 6 chr2 3585166 3585697 -247102157 + (CA)n Simple_repeat Simple_repeat 1 539 0 254 159 0 79 chr2 3585697 3585760 -247102094 - MER4-int LTR ERV1 -5432 1166 1109 387 227 13 7 chr2 3585770 3585920 -247101934 + (CA)n Simple_repeat Simple_repeat 2 152 0 368 322 11 11 chr2 3585934 3586111 -247101743 + (CA)n Simple_repeat Simple_repeat 1 177 0 359 226 19 7 chr2 3586125 3586280 -247101574 + (CA)n Simple_repeat Simple_repeat 1 157 0 295 195 183 0 chr2 3588045 3588127 -247099727 + MIR SINE MIR 61 157 -105 188 233 67 50 chr2 3588080 3588140 -247099714 - L2 LINE L2 -1887 1427 1367 * 521 359 35 37 chr2 3588343 3588805 -247099049 + L2 LINE L2 2156 2616 -698 22 0 0 0 chr2 3588966 3588988 -247098866 + AT_rich Low_complexity Low_complexity 1 22 0 531 0 0 0 chr2 3589496 3589555 -247098299 + (TA)n Simple_repeat Simple_repeat 2 60 0 275 88 35 53 chr2 3589555 3589612 -247098242 + LTR33A LTR ERVL 450 505 -18 23 0 0 0 chr2 3590230 3590253 -247097601 + AT_rich Low_complexity Low_complexity 1 23 0 435 335 11 47 chr2 3590892 3591083 -247096771 + L1ME4a LINE L1 5731 5914 -207 260 300 47 0 chr2 3591093 3591243 -247096611 + L1ME4a LINE L1 5956 6112 -9 621 294 45 81 chr2 3591601 3592022 -247095832 + L2 LINE L2 2127 2532 -782 183 333 0 0 chr2 3592123 3592177 -247095677 - MIR SINE MIR -128 134 81 275 303 11 22 chr2 3593457 3593635 -247094219 + (TGAG)n Simple_repeat Simple_repeat 4 179 0 418 223 54 18 chr2 3596423 3596535 -247091319 - MIR3 SINE MIR 0 208 93 425 286 104 16 chr2 3596705 3596897 -247090957 - MIR SINE MIR -48 214 6 3686 122 23 28 chr2 3597085 3597685 -247090169 + MER4A LTR ERV1 1 597 -3 229 179 45 143 chr2 3598866 3598978 -247088876 - MLT1L LTR MaLR -220 395 295 550 238 41 8 chr2 3601218 3601340 -247086514 - MIR SINE MIR -70 192 67 340 262 0 36 chr2 3601417 3601501 -247086353 - MIR SINE MIR -29 233 153 1039 256 94 20 chr2 3601574 3601996 -247085858 + L1ME1 LINE L1 5717 6334 0 294 375 26 7 chr2 3602941 3603093 -247084761 - MIR SINE MIR -50 212 58 198 247 129 54 chr2 3603105 3603198 -247084656 - MIR SINE MIR -3 259 160 245 216 114 34 chr2 3603338 3603426 -247084428 + MLT1I LTR MaLR 114 208 -201 277 279 0 0 chr2 3604233 3604294 -247083560 + L2 LINE L2 3208 3268 -4 270 260 115 29 chr2 3605138 3605242 -247082612 + MLT1J2 LTR MaLR 291 403 -47 550 253 217 9 chr2 3605273 3605695 -247082159 + L2 LINE L2 2701 3217 -96 555 173 0 0 chr2 3605704 3605872 -247081982 + (TG)n Simple_repeat Simple_repeat 2 169 0 420 266 0 0 chr2 3605872 3605966 -247081888 + L2 LINE L2 3218 3311 -2 288 137 0 0 chr2 3606746 3606797 -247081057 + (T)n Simple_repeat Simple_repeat 1 51 0 260 239 28 0 chr2 3608147 3608218 -247079636 - L1MA6 LINE L1 -167 6133 6061 2731 186 227 70 chr2 3610638 3611518 -247076336 - LTR28 LTR ERV1 -2 1018 1 208 261 92 0 chr2 3612041 3612106 -247075748 - L2 LINE L2 -10 3303 3233 271 152 0 0 chr2 3614280 3614326 -247073528 + U6 snRNA snRNA 62 107 0 2171 123 3 0 chr2 3614507 3614800 -247073054 - AluSp SINE Alu -19 294 1 322 273 61 61 chr2 3615101 3615427 -247072427 - L1M4 LINE L1 -595 5583 5258 649 364 68 23 chr2 3615449 3616009 -247071845 - L1M4 LINE L1 -922 5224 4640 1691 182 17 14 chr2 3616010 3616307 -247071547 - AluJo SINE Alu -14 298 1 1091 151 47 0 chr2 3616320 3616532 -247071322 - L1M2 LINE L1 -647 5644 5423 805 211 0 0 chr2 3616527 3616693 -247071161 + L1M2 LINE L1 5628 5793 -507 * 437 187 0 37 chr2 3616693 3616880 -247070974 + (TA)n Simple_repeat Simple_repeat 1 180 0 196 194 0 28 chr2 3616891 3616963 -247070891 + (TA)n Simple_repeat Simple_repeat 1 70 0 303 129 57 71 chr2 3616964 3617034 -247070820 + L1MCa LINE L1 2000 2068 -4358 408 160 7 35 chr2 3617034 3617178 -247070676 + (TA)n Simple_repeat Simple_repeat 1 140 0 268 313 73 20 chr2 3617182 3617428 -247070426 + L1MC3 LINE L1 5750 6008 -1777 * 2229 128 39 25 chr2 3617214 3617645 -247070209 + L1MA8 LINE L1 5782 6218 -73 458 286 86 37 chr2 3617656 3617901 -247069953 - L1M4 LINE L1 -1503 4643 4387 1664 194 18 3 chr2 3617960 3618267 -247069587 + AluSx SINE Alu 1 311 0 571 314 62 47 chr2 3618278 3618419 -247069435 + MIR SINE MIR 1 149 -113 1826 189 36 3 chr2 3618419 3618752 -247069102 - MER7A DNA MER2_type -1 345 4 571 314 62 47 chr2 3618752 3618868 -247068986 + MIR SINE MIR 149 262 0 1774 236 17 48 chr2 3619533 3620015 -247067839 - MLT1C LTR MaLR 0 467 1 381 366 31 11 chr2 3620228 3620419 -247067435 - MIR SINE MIR -21 241 47 395 303 32 50 chr2 3623098 3623319 -247064535 - L2 LINE L2 -15 3298 3082 403 326 114 15 chr2 3623483 3623817 -247064037 - L2 LINE L2 -559 2755 2389 2595 163 19 26 chr2 3624086 3624440 -247063414 - MSTB LTR MaLR 0 426 74 2402 98 0 0 chr2 3624440 3624745 -247063109 - AluSg SINE Alu -5 305 1 2595 163 19 26 chr2 3624745 3624819 -247063035 - MSTB LTR MaLR -352 74 1 261 348 62 53 chr2 3625029 3625589 -247062265 + L2 LINE L2 2517 3082 -190 789 222 11 6 chr2 3626503 3626683 -247061171 - MLT1A1 LTR MaLR 0 365 185 1976 81 16 0 chr2 3626743 3626991 -247060863 + AluSp SINE Alu 44 295 -18 323 189 0 113 chr2 3627030 3627052 -247060802 - MLT1A1 LTR MaLR -334 94 71 2163 119 10 3 chr2 3627052 3627354 -247060500 - AluSg SINE Alu -6 304 1 323 189 0 113 chr2 3627354 3627437 -247060417 - MLT1A1 LTR MaLR -357 71 1 1437 278 123 24 chr2 3627626 3628339 -247059515 - L1MC4 LINE L1 -87 7955 7172 322 309 55 68 chr2 3628414 3628576 -247059278 - MIR SINE MIR -12 250 90 2325 171 15 22 chr2 3628576 3629033 -247058821 - MSTB2 LTR MaLR -3 454 1 322 309 55 68 chr2 3629033 3629090 -247058764 - MIR SINE MIR -172 90 34 32 0 0 0 chr2 3629667 3629699 -247058155 + AT_rich Low_complexity Low_complexity 1 32 0 2256 120 10 0 chr2 3630063 3630362 -247057492 + AluSx SINE Alu 1 302 -10 186 222 0 0 chr2 3631162 3631216 -247056638 + A-rich Low_complexity Low_complexity 1 54 0 1104 227 97 61 chr2 3631245 3631690 -247056164 + MER101 LTR ERV1 5 465 -9 378 299 28 57 chr2 3632204 3632402 -247055452 + L1MC4a LINE L1 5574 5590 -531 3948 171 25 14 chr2 3632402 3633116 -247054738 + MER72 LTR ERV1 1 722 0 378 299 28 57 chr2 3633116 3633269 -247054585 + L1MC4a LINE L1 5590 5746 -375 258 323 91 0 chr2 3633613 3633712 -247054142 - MIR SINE MIR -63 145 38 318 261 72 36 chr2 3635595 3635706 -247052148 + L2 LINE L2 3125 3239 -33 220 245 19 0 chr2 3635984 3636037 -247051817 + L2 LINE L2 3258 3311 -2 247 264 17 142 chr2 3636071 3636212 -247051642 + MIR SINE MIR 32 153 -66 321 265 15 0 chr2 3636296 3636364 -247051490 - L2 LINE L2 0 3313 3245 581 321 125 27 chr2 3636606 3636974 -247050880 - L2 LINE L2 -18 3254 2851 254 295 114 30 chr2 3638027 3638182 -247049672 + MIR SINE MIR 39 212 -50 2203 81 13 3 chr2 3638182 3638492 -247049362 + AluSq SINE Alu 1 313 0 254 295 114 30 chr2 3638492 3638533 -247049321 + MIR SINE MIR 212 248 -14 397 186 0 72 chr2 3639152 3639345 -247048509 + C-rich Low_complexity Low_complexity 2 180 0 467 272 35 0 chr2 3639362 3639535 -247048319 + C-rich Low_complexity Low_complexity 2 180 0 365 314 0 0 chr2 3639548 3639723 -247048131 + (CACCC)n Simple_repeat Simple_repeat 4 178 0 199 292 42 31 chr2 3640316 3640412 -247047442 - MIR3 SINE MIR -25 183 87 2033 113 0 0 chr2 3641152 3641434 -247046420 + AluSx SINE Alu 3 284 -28 770 240 134 55 chr2 3643145 3643511 -247044343 - MSTD LTR MaLR -1 395 1 306 304 21 29 chr2 3643544 3643696 -247044158 - MIR SINE MIR -67 141 3 2009 89 0 4 chr2 3643992 3644263 -247043591 + AluSc SINE Alu 25 294 -15 535 105 26 0 chr2 3645083 3645201 -247042653 + AluSg/x SINE Alu 201 320 0 27 29 0 0 chr2 3645874 3645908 -247041946 + AT_rich Low_complexity Low_complexity 1 34 0 315 285 36 67 chr2 3647251 3647416 -247040438 - L2 LINE L2 -1 3312 3153 352 339 23 8 chr2 3647519 3647649 -247040205 + L2 LINE L2 3137 3268 -4 4464 187 55 23 chr2 3647653 3648626 -247039228 - L1MA9 LINE L1 -38 6274 5270 2084 217 70 2 chr2 3648625 3649123 -247038731 + L1MA9 LINE L1 4728 5259 -887 * 2005 144 0 3 chr2 3649544 3649849 -247038005 - AluJb SINE Alu -6 306 3 181 371 86 19 chr2 3651208 3651464 -247036390 - L2 LINE L2 -457 2857 2585 474 224 63 29 chr2 3652721 3652895 -247034959 - MER104 DNA MER2_type 0 180 1 198 366 24 0 chr2 3653195 3653277 -247034577 + L2 LINE L2 3184 3267 -5 371 263 108 61 chr2 3654009 3654287 -247033567 + L1MC5 LINE L1 7626 7916 -45 2394 72 0 0 chr2 3654852 3655159 -247032695 + AluY SINE Alu 1 307 -4 325 265 8 98 chr2 3655175 3655307 -247032547 + L1ME4a LINE L1 5580 5699 -422 298 308 42 49 chr2 3655344 3655521 -247032333 + L1ME4a LINE L1 5784 5960 -161 2046 128 0 3 chr2 3655521 3655818 -247032036 + AluSg SINE Alu 3 298 -12 298 308 42 49 chr2 3655818 3655903 -247031951 + L1ME4a LINE L1 5960 6044 -77 4633 208 49 36 chr2 3655903 3657601 -247030253 - L1MC2 LINE L1 -8 6754 5038 1680 174 0 10 chr2 3657601 3657894 -247029960 + AluJo SINE Alu 10 299 -13 4633 208 49 36 chr2 3657894 3658046 -247029808 - L1MC2 LINE L1 -1724 5038 4890 4879 229 70 87 chr2 3658059 3658122 -247029732 - L1MC2 LINE L1 -2113 4451 4388 2061 164 44 29 chr2 3658122 3658506 -247029348 + MLT1B LTR MaLR 1 390 0 4879 229 70 87 chr2 3658506 3659154 -247028700 - L1MC2 LINE L1 -2176 4388 3731 216 0 0 0 chr2 3659154 3659178 -247028676 + (TC)n Simple_repeat Simple_repeat 2 25 0 4879 229 70 87 chr2 3659178 3659283 -247028571 - L1MC2 LINE L1 -2833 3731 3626 716 284 0 0 chr2 3659283 3659452 -247028402 + MER6B DNA MER2_type 2 170 -40 4879 229 70 87 chr2 3659452 3661156 -247026698 - L1MC2 LINE L1 -2938 3626 1787 2886 194 29 23 chr2 3661159 3661310 -247026544 - L1MC2 LINE L1 -4852 1193 1044 2597 115 3 13 chr2 3661310 3661685 -247026169 + THE1C LTR MaLR 1 371 -4 2886 194 29 23 chr2 3661685 3662555 -247025299 - L1MC2 LINE L1 -5001 1044 517 224 215 37 103 chr2 3663259 3663366 -247024488 - MIR SINE MIR -65 143 44 340 195 79 14 chr2 3663786 3663953 -247023901 - ORSL DNA AcHobo 0 275 67 297 274 0 0 chr2 3665130 3665225 -247022629 + (TG)n Simple_repeat Simple_repeat 2 96 0 26 30 0 0 chr2 3665471 3665504 -247022350 + AT_rich Low_complexity Low_complexity 1 33 0 231 114 0 0 chr2 3665591 3665626 -247022228 + (A)n Simple_repeat Simple_repeat 1 35 0 2090 143 55 62 chr2 3667207 3667640 -247020214 - Tigger2a DNA MER2_type -4 430 1 218 316 60 8 chr2 3667715 3667832 -247020022 - MIR3 SINE MIR -24 184 62 2066 132 0 0 chr2 3670084 3670373 -247017481 - AluSx SINE Alu -23 289 1 200 261 62 43 chr2 3671670 3671799 -247016055 - MIR SINE MIR -112 150 20 336 268 148 0 chr2 3672180 3672322 -247015532 + MER45C DNA AcHobo 1 163 -790 355 281 43 49 chr2 3672498 3672683 -247015171 + MER45C DNA AcHobo 461 644 -309 1306 234 38 0 chr2 3673032 3673348 -247014506 + MER45B DNA AcHobo 713 1040 0 965 266 126 42 chr2 3675215 3675669 -247012185 + HAL1 LINE L1 597 1088 -1419 2055 127 0 0 chr2 3675669 3675968 -247011886 + AluSx SINE Alu 1 299 -13 497 298 104 31 chr2 3675980 3676336 -247011518 + L1MCc LINE L1 24 405 -6018 1706 263 127 43 chr2 3676490 3677189 -247010665 + L1MCc LINE L1 807 1446 -5495 1626 174 17 3 chr2 3677189 3677477 -247010377 + AluJb SINE Alu 7 298 -14 1706 263 127 43 chr2 3677477 3678521 -247009333 + L1MCc LINE L1 1446 2720 -4221 266 71 0 24 chr2 3678521 3678563 -247009291 + (TAGA)n Simple_repeat Simple_repeat 2 42 0 1706 263 127 43 chr2 3678563 3678597 -247009257 + L1MCc LINE L1 2720 2750 -4191 486 221 25 16 chr2 3678622 3678744 -247009110 + L1ME3A LINE L1 196 318 -6245 332 291 114 48 chr2 3678761 3679115 -247008739 + MLT1J1 LTR MaLR 6 343 -103 491 155 78 6 chr2 3679724 3680053 -247007801 + (TAGA)n Simple_repeat Simple_repeat 1 352 0 248 368 9 35 chr2 3680067 3680181 -247007673 + MIR SINE MIR 2 112 -150 209 255 10 112 chr2 3680527 3680625 -247007229 + L2 LINE L2 3223 3310 -3 201 332 189 37 chr2 3680657 3680874 -247006980 - L2 LINE L2 -2 3270 3021 278 273 91 82 chr2 3682751 3682971 -247004883 - MIR SINE MIR -6 256 35 218 336 92 8 chr2 3683631 3683750 -247004104 - L3 LINE CR1 -1022 555 427 26 0 0 0 chr2 3684004 3684030 -247003824 + AT_rich Low_complexity Low_complexity 1 26 0 396 59 0 0 chr2 3684689 3684740 -247003114 + (CA)n Simple_repeat Simple_repeat 2 52 0 282 123 0 0 chr2 3684854 3684911 -247002943 + (CAGA)n Simple_repeat Simple_repeat 2 58 0 219 336 75 9 chr2 3684966 3685073 -247002781 - MIR SINE MIR -61 147 34 310 346 92 65 chr2 3685581 3686029 -247001825 + L1ME3A LINE L1 323 782 -5590 317 377 20 20 chr2 3686164 3686310 -247001544 + L1ME3A LINE L1 1196 1341 -5043 917 298 124 21 chr2 3686422 3686985 -247000869 - MLT1E1 LTR MaLR -29 625 5 1048 287 111 25 chr2 3686997 3688866 -246998988 + L1ME3A LINE L1 1575 3554 -2828 * 3791 179 33 33 chr2 3688858 3689565 -246998289 + L1MB7 LINE L1 5048 5756 -428 1771 151 141 26 chr2 3689565 3689949 -246997905 - MSTA LTR MaLR 0 428 1 3791 179 33 33 chr2 3689949 3690357 -246997497 + L1MB7 LINE L1 5756 6163 -21 2144 273 79 22 chr2 3690380 3691974 -246995880 + L1ME3A LINE L1 4727 6397 -9 1112 165 58 145 chr2 3692056 3692456 -246995398 - MLT1A1 LTR MaLR 0 365 1 236 356 34 62 chr2 3693955 3694101 -246993753 - L2 LINE L2 -5 3267 3126 21 0 0 0 chr2 3694584 3694605 -246993249 + AT_rich Low_complexity Low_complexity 1 21 0 2267 103 3 0 chr2 3694608 3694900 -246992954 + AluSq SINE Alu 1 293 -20 4946 121 56 39 chr2 3696046 3697687 -246990167 + L1PA16 LINE L1 4495 6166 0 354 277 46 8 chr2 3697742 3697872 -246989982 + MIR3 SINE MIR 74 208 0 40 37 0 0 chr2 3697877 3697931 -246989923 + AT_rich Low_complexity Low_complexity 1 54 0 598 287 59 1 chr2 3698208 3698397 -246989457 - MIR SINE MIR -50 212 15 302 372 78 35 chr2 3699754 3700125 -246987729 - L2 LINE L2 -603 2711 2325 1037 177 36 64 chr2 3700171 3700391 -246987463 + AluJo SINE Alu 68 281 -31 4052 145 21 39 chr2 3700395 3700522 -246987332 + L1MA7 LINE L1 5484 5612 -679 2130 122 0 44 chr2 3700522 3700841 -246987013 + AluSx SINE Alu 5 309 -3 4052 145 21 39 chr2 3700841 3701536 -246986318 + L1MA7 LINE L1 5612 6291 0 364 88 81 0 chr2 3701685 3701765 -246986089 - L1MB1 LINE L1 -1 6167 6098 5171 79 11 4 chr2 3701798 3702157 -246985697 - L1PB1 LINE L1 -2 6149 5794 414 0 0 0 chr2 3702157 3702203 -246985651 + (TG)n Simple_repeat Simple_repeat 2 47 0 5171 79 11 4 chr2 3702203 3702564 -246985290 - L1PB1 LINE L1 -357 5794 5424 368 323 40 7 chr2 3702703 3702916 -246984938 + MIR SINE MIR 5 222 -40 1026 220 112 67 chr2 3702917 3703372 -246984482 - MLT1H LTR MaLR -1 548 22 263 304 91 28 chr2 3704009 3704262 -246983592 + MLT1J LTR MaLR 236 504 -7 400 217 148 41 chr2 3704880 3705124 -246982730 + HAL1b LINE L1 726 995 -353 238 182 18 0 chr2 3705305 3705360 -246982494 - MLT2B1 LTR ERVL 0 520 465 183 80 0 0 chr2 3705364 3705389 -246982465 + (CATATA)n Simple_repeat Simple_repeat 2 26 0 768 215 133 7 chr2 3705446 3705803 -246982051 - MLT2B1 LTR ERVL -61 459 1 262 318 108 56 chr2 3706220 3706598 -246981256 + L2 LINE L2 2580 2977 -337 2316 99 0 3 chr2 3708841 3709135 -246978719 - AluSx SINE Alu -19 293 1 237 173 0 0 chr2 3709166 3709218 -246978636 - L1MB8 LINE L1 -14 6164 6113 * 5450 193 25 12 chr2 3709215 3710957 -246976897 + L1M2 LINE L1 4027 5787 -525 11533 179 49 23 chr2 3710960 3713434 -246974420 + L1P2 LINE L1 2253 4660 -1494 317 67 0 0 chr2 3713434 3713479 -246974375 + MADE1 DNA Mariner 1 45 -35 11533 179 49 23 chr2 3713479 3713754 -246974100 + L1P2 LINE L1 4660 4926 -1228 3339 46 0 5 chr2 3713754 3714171 -246973683 - L1PA5 LINE L1 -2 6152 5738 11533 179 49 23 chr2 3714171 3714765 -246973089 + L1PA5 LINE L1 4926 5733 -421 2974 152 26 8 chr2 3714743 3715520 -246972334 + L1PB4 LINE L1 4988 5774 -382 * 297 0 0 0 chr2 3715520 3715553 -246972301 + (TA)n Simple_repeat Simple_repeat 2 34 0 1230 160 27 114 chr2 3715867 3715963 -246971891 + L1PB4 LINE L1 5782 5885 -271 305 70 0 0 chr2 3715963 3716006 -246971848 + MADE1 DNA Mariner 35 77 -3 1230 160 27 114 chr2 3716006 3716284 -246971570 + L1PB4 LINE L1 5885 6156 0 2591 152 16 4 chr2 3716326 3717183 -246970671 + L1P4 LINE L1 4828 5692 -473 1740 175 10 0 chr2 3717186 3717478 -246970376 + AluJb SINE Alu 1 295 -17 882 172 0 0 chr2 3717698 3717867 -246969987 - L1MA5 LINE L1 0 7362 7194 4644 62 8 8 chr2 3717867 3718477 -246969377 + L1PA7 LINE L1 5543 6153 -1 410 173 0 0 chr2 3718479 3718560 -246969294 - L1MA5 LINE L1 -152 7210 7130 266 51 26 0 chr2 3718575 3718614 -246969240 - MADE1 DNA Mariner -40 40 1 4152 153 14 34 chr2 3718615 3719573 -246968281 - L1MA5 LINE L1 -234 7128 6207 436 50 0 200 chr2 3719573 3719673 -246968181 + MADE1 DNA Mariner 1 80 0 4152 153 14 34 chr2 3719673 3720248 -246967606 - L1MA5 LINE L1 -1155 6207 5622 1026 237 3 61 chr2 3720569 3720881 -246966973 - L1M2b LINE L1 -6915 294 1 412 222 18 66 chr2 3720974 3721141 -246966713 - L1MC4 LINE L1 -970 7072 6914 261 274 102 21 chr2 3721194 3721380 -246966474 - L1M4 LINE L1 -1817 4329 4129 249 119 0 0 chr2 3721511 3721553 -246966301 + (TC)n Simple_repeat Simple_repeat 1 42 0 458 247 100 20 chr2 3721565 3721816 -246966038 - L1M4 LINE L1 -2195 3951 3681 266 325 9 0 chr2 3722861 3722975 -246964879 - MER94 DNA DNA -19 115 1 227 271 76 34 chr2 3723314 3723432 -246964422 + MIR SINE MIR 106 228 -34 336 193 0 0 chr2 3724484 3724541 -246963313 - L2 LINE L2 -9 3304 3248 414 296 0 7 chr2 3724926 3725229 -246962625 + (CA)n Simple_repeat Simple_repeat 1 300 0 437 328 0 11 chr2 3725242 3725419 -246962435 + (CA)n Simple_repeat Simple_repeat 1 175 0 9261 195 48 29 chr2 3726289 3729100 -246958754 - L1MA5 LINE L1 -1603 5605 1810 2199 123 6 25 chr2 3729100 3729418 -246958436 + AluSx SINE Alu 1 312 0 9261 195 48 29 chr2 3729418 3730868 -246956986 - L1MA5 LINE L1 -5398 1810 390 2162 77 37 3 chr2 3930918 3931216 -246756638 + AluSx SINE Alu 1 308 -4 394 208 69 10 chr2 3931734 3931835 -246756019 - L1MC/D LINE L1 -2017 5768 5662 276 197 70 14 chr2 3931934 3932005 -246755849 + MER58C DNA MER1_type 127 201 -14 210 309 52 0 chr2 3933085 3933182 -246754672 + MIR SINE MIR 151 252 -10 243 267 0 69 chr2 3933383 3933499 -246754355 + G-rich Low_complexity Low_complexity 6 113 0 686 168 18 13 chr2 3934922 3935153 -246752701 + (CCCA)n Simple_repeat Simple_repeat 1 232 0 484 243 12 0 chr2 3935171 3935340 -246752514 + (TCCA)n Simple_repeat Simple_repeat 1 171 0 * 582 188 28 11 chr2 3935313 3935489 -246752365 + (CCCA)n Simple_repeat Simple_repeat 2 180 0 192 301 55 0 chr2 3940210 3940283 -246747571 - L2 LINE L2 -220 3052 2976 476 265 49 54 chr2 3942250 3942454 -246745400 - MIR SINE MIR -40 222 20 270 302 129 14 chr2 3947686 3947825 -246740029 - MIR SINE MIR -1 261 107 1315 213 33 26 chr2 3947986 3948291 -246739563 - MER44D DNA MER2_type -30 579 3 450 0 0 0 chr2 3948301 3948351 -246739503 + (TG)n Simple_repeat Simple_repeat 2 51 0 406 298 78 5 chr2 3948733 3948924 -246738930 + MIR SINE MIR 36 240 -22 205 216 83 49 chr2 3949195 3949309 -246738545 + MIR SINE MIR 11 139 -69 2205 104 0 0 chr2 3950690 3950988 -246736866 + AluSg SINE Alu 6 303 -7 357 323 110 16 chr2 3951428 3951714 -246736140 - L1ME LINE L1 -285 5836 5520 375 295 65 35 chr2 3952065 3952265 -246735589 - L2 LINE L2 -4 3309 3104 233 371 32 27 chr2 3952561 3952747 -246735107 - L2 LINE L2 -629 2685 2499 1737 141 0 14 chr2 3953316 3953593 -246734261 + AluSx SINE Alu 1 273 -39 1673 151 3 49 chr2 3955560 3955864 -246731990 + AluJo SINE Alu 1 290 -22 6698 196 160 9 chr2 3955912 3957544 -246730310 + L1PBa LINE L1 7 1884 -4979 3685 133 22 8 chr2 3957546 3958575 -246729279 + L1P5 LINE L1 4751 5794 -357 441 0 0 0 chr2 3958575 3958624 -246729230 + (TA)n Simple_repeat Simple_repeat 2 50 0 3685 133 22 8 chr2 3958624 3958651 -246729203 + L1P5 LINE L1 5794 5819 -332 2131 114 0 16 chr2 3960259 3960575 -246727279 + AluSx SINE Alu 1 311 -1 21 0 0 0 chr2 3960575 3960596 -246727258 + AT_rich Low_complexity Low_complexity 1 21 0 1694 229 8 30 chr2 3961350 3961722 -246726132 + MLT1A1 LTR MaLR 1 364 -1 21 36 0 0 chr2 3962000 3962028 -246725826 + AT_rich Low_complexity Low_complexity 1 28 0 296 48 24 0 chr2 3962057 3962099 -246725755 + (TTTTA)n Simple_repeat Simple_repeat 1 43 0 231 114 0 0 chr2 3962100 3962135 -246725719 + (CGTTG)n Simple_repeat Simple_repeat 1 35 0 1928 150 0 0 chr2 3962137 3962424 -246725430 - AluSx SINE Alu -25 287 1 1433 176 3 102 chr2 3962689 3963013 -246724841 + AluJb SINE Alu 1 292 -20 393 136 0 0 chr2 3963649 3963715 -246724139 + (GGGA)n Simple_repeat Simple_repeat 1 66 0 210 240 0 20 chr2 3965970 3966020 -246721834 + CT-rich Low_complexity Low_complexity 6 54 0 2145 96 10 0 chr2 3967038 3967340 -246720514 - AluSp SINE Alu -8 305 1 1830 143 24 0 chr2 3968068 3968355 -246719499 - AluSx SINE Alu -16 296 3 1224 266 65 54 chr2 3968382 3968919 -246718935 - L1ME1 LINE L1 -35 6131 5589 23 0 0 0 chr2 3969360 3969383 -246718471 + AT_rich Low_complexity Low_complexity 1 23 0 293 285 81 16 chr2 3970550 3970673 -246717181 - MIR SINE MIR -107 155 25 1837 130 74 0 chr2 3970728 3971012 -246716842 + AluSx SINE Alu 1 305 -7 207 0 0 0 chr2 3973114 3973137 -246714717 + (A)n Simple_repeat Simple_repeat 1 23 0 282 344 33 0 chr2 3973349 3973471 -246714383 - L2 LINE L2 -5 3308 3183 390 338 24 29 chr2 3975019 3975226 -246712628 + MIR SINE MIR 51 256 -6 1443 103 15 15 chr2 3979226 3979429 -246708425 + AluSq SINE Alu 2 204 -109 242 311 25 43 chr2 3980217 3980378 -246707476 - MIR3 SINE MIR -3 205 48 1657 156 33 0 chr2 3982785 3983029 -246704825 + AluJb SINE Alu 13 264 -48 667 224 44 6 chr2 3985527 3985710 -246702144 - L1MC4a LINE L1 -1951 5857 5668 333 195 37 49 chr2 3986550 3986632 -246701222 - L1MC4 LINE L1 -1326 6716 6636 218 269 0 0 chr2 3986940 3986992 -246700862 + GA-rich Low_complexity Low_complexity 1 52 0 553 271 109 35 chr2 3987469 3987809 -246700045 - MLT1J1 LTR MaLR -2 444 80 528 325 92 14 chr2 3989007 3989520 -246698334 - HAL1 LINE L1 -988 1519 967 2380 71 0 20 chr2 3990905 3991232 -246696622 + AluY SINE Alu 1 321 0 196 244 233 11 chr2 3991255 3991345 -246696509 - MIR SINE MIR -133 129 20 396 233 0 69 chr2 3991392 3991581 -246696273 + (CACAC)n Simple_repeat Simple_repeat 2 177 0 391 257 5 59 chr2 3991619 3991806 -246696048 + (CACAC)n Simple_repeat Simple_repeat 2 178 0 191 150 25 25 chr2 3992509 3992549 -246695305 - L2 LINE L2 -6 3307 3268 1036 252 66 7 chr2 3992561 3992835 -246695019 + L1MD2 LINE L1 6060 6349 -10 567 265 117 47 chr2 3993795 3994154 -246693700 - MLT1J2 LTR MaLR 0 450 67 757 160 56 0 chr2 3994297 3994422 -246693432 + AluJb SINE Alu 2 133 -179 1870 164 16 3 chr2 3994438 3994742 -246693112 + AluJb SINE Alu 1 308 -4 282 315 40 20 chr2 3994912 3995061 -246692793 + L1ME LINE L1 333 484 -5912 1648 198 60 11 chr2 3995678 3996031 -246691823 - MLT1A2 LTR MaLR -4 370 1 862 270 35 76 chr2 3996038 3996138 -246691716 + L1ME LINE L1 793 896 -5513 1038 212 38 19 chr2 3996138 3996350 -246691504 - MER20 DNA MER1_type -3 216 1 862 270 35 76 chr2 3996350 3996853 -246691001 + L1ME LINE L1 896 1371 -5038 2313 256 44 13 chr2 3996856 3997621 -246690233 + L1M4 LINE L1 3500 4288 -1858 1409 221 143 20 chr2 3997623 3998111 -246689743 + L1M4 LINE L1 4769 5316 -830 829 191 114 0 chr2 3998109 3998329 -246689525 - L1PA16 LINE L1 -1 6165 5921 * 5078 159 36 22 chr2 4002910 4002974 -246684880 - L1MA9 LINE L1 -5 6307 6245 375 23 0 0 chr2 4002974 4003018 -246684836 + (TG)n Simple_repeat Simple_repeat 1 44 0 1770 190 0 0 chr2 4003018 4003297 -246684557 - AluJo SINE Alu -33 279 1 5078 159 36 22 chr2 4003297 4004444 -246683410 - L1MA9 LINE L1 -66 6246 5071 2402 119 34 8 chr2 4004446 4004800 -246683054 + THE1B LTR MaLR 1 363 -1 9426 114 59 45 chr2 4004801 4006359 -246681495 + THE1B-int LTR MaLR 1 1580 0 2169 137 35 30 chr2 4006359 4006732 -246681122 + THE1C LTR MaLR 1 375 0 7292 126 18 129 chr2 4006732 4008334 -246679520 - Tigger4(Zombi) DNA MER2_type -1304 1427 4 8643 186 39 14 chr2 4008337 4010307 -246677547 - L1MA9 LINE L1 -1231 4915 2897 471 256 93 69 chr2 4010785 4011206 -246676648 - L1ME4a LINE L1 -74 6047 5617 701 289 39 10 chr2 4011647 4011851 -246676003 - MER58A DNA MER1_type 0 224 15 213 154 0 0 chr2 4013169 4013208 -246674646 + (CA)n Simple_repeat Simple_repeat 1 39 0 895 243 38 0 chr2 4014494 4014704 -246673150 - MER20 DNA MER1_type 0 219 2 1007 214 43 12 chr2 4016589 4016846 -246671008 + MLT1B LTR MaLR 1 265 -125 889 179 11 11 chr2 4016889 4017068 -246670786 + MLT1B LTR MaLR 23 201 -189 485 268 94 24 chr2 4018341 4018595 -246669259 + HAL1 LINE L1 578 849 -1658 664 287 142 12 chr2 4018832 4019170 -246668684 + HAL1 LINE L1 1162 1543 -964 476 284 130 41 chr2 4019185 4019445 -246668409 + HAL1 LINE L1 1584 1874 -633 7136 92 34 9 chr2 4019445 4020390 -246667464 - LTR5 LTR ERVK -1 968 1 476 284 130 41 chr2 4020390 4020421 -246667433 + HAL1 LINE L1 1874 1901 -606 1262 220 116 25 chr2 4020588 4020984 -246666870 - MLT1C LTR MaLR 0 467 36 289 279 0 0 chr2 4021289 4021375 -246666479 + LTR67 LTR ERVL 468 553 -4 361 82 0 0 chr2 4021525 4021574 -246666280 - MADE1 DNA Mariner 0 80 32 490 284 28 11 chr2 4025019 4025195 -246662659 + (TG)n Simple_repeat Simple_repeat 1 179 0 407 220 28 34 chr2 4025233 4025566 -246662288 + (TATG)n Simple_repeat Simple_repeat 1 331 0 337 246 23 14 chr2 4025573 4025934 -246661920 + (TG)n Simple_repeat Simple_repeat 1 364 0 216 149 0 0 chr2 4026604 4026651 -246661203 + (A)n Simple_repeat Simple_repeat 1 47 0 2238 125 0 3 chr2 4026653 4026965 -246660889 + AluSx SINE Alu 1 311 -1 214 235 86 37 chr2 4027149 4027230 -246660624 - MIR SINE MIR -58 150 66 886 294 95 33 chr2 4027519 4028237 -246659617 + HAL1 LINE L1 597 1358 -1149 421 267 59 72 chr2 4028333 4028554 -246659300 + MIR SINE MIR 45 262 0 470 274 150 16 chr2 4028560 4028866 -246658988 + HAL1 LINE L1 1441 1787 -720 773 244 101 0 chr2 4029166 4029383 -246658471 + MIR SINE MIR 14 252 -10 720 225 62 72 chr2 4029732 4030125 -246657729 + LTR42 LTR ERVL 4 478 -17 2677 87 6 0 chr2 4030158 4030515 -246657339 - THE1B LTR MaLR -5 359 1 186 356 37 37 chr2 4030980 4031115 -246656739 + L2 LINE L2 3138 3272 0 209 189 0 0 chr2 4031117 4031154 -246656700 + (TGAG)n Simple_repeat Simple_repeat 1 37 0 263 266 156 18 chr2 4031229 4031338 -246656516 - L2 LINE L2 -1 3271 3148 565 348 74 40 chr2 4033102 4033479 -246654375 + HAL1 LINE L1 1039 1428 -1079 2303 123 0 0 chr2 4033482 4033791 -246654063 - AluSx SINE Alu -3 309 1 405 293 151 52 chr2 4033801 4034166 -246653688 + L1MC4a LINE L1 5766 6166 -1642 429 283 123 42 chr2 4034185 4034397 -246653457 - MLT1I LTR MaLR -66 343 115 1100 244 139 11 chr2 4034731 4035496 -246652358 + L1M4 LINE L1 1643 2527 -3855 871 243 17 0 chr2 4035505 4035686 -246652168 + MER8 DNA MER2_type 1 184 -55 2004 209 51 6 chr2 4035686 4036159 -246651695 + L1M4 LINE L1 4939 5432 -950 706 190 8 0 chr2 4036159 4036280 -246651574 + FLAM_C SINE Alu 9 130 -13 1716 197 0 10 chr2 4036284 4036578 -246651276 + AluJo SINE Alu 3 293 -19 1671 166 40 3 chr2 4036581 4036978 -246650876 + L1M4 LINE L1 5456 5865 -555 229 328 46 15 chr2 4036988 4037119 -246650735 + HAL1b LINE L1 387 521 -827 265 301 52 22 chr2 4037657 4037793 -246650061 + L1M4c LINE L1 3831 3970 -2412 1173 325 130 44 chr2 4037802 4038082 -246649772 + L1M4c LINE L1 4109 4364 -2018 282 29 0 0 chr2 4038082 4038117 -246649737 + (CA)n Simple_repeat Simple_repeat 2 36 0 1173 325 130 44 chr2 4038117 4038731 -246649123 + L1M4c LINE L1 4364 5080 -1302 1086 248 105 16 chr2 4038748 4039062 -246648792 + MER2 DNA MER2_type 1 342 -2 744 315 22 8 chr2 4039094 4039327 -246648527 + MIR SINE MIR 11 241 -21 222 307 0 50 chr2 4040013 4040114 -246647740 + (CACG)n Simple_repeat Simple_repeat 3 98 0 4151 154 37 47 chr2 4043570 4044564 -246643290 - MER11C LTR ERVK 0 1071 1 2463 39 3 3 chr2 4046989 4047272 -246640582 - AluY SINE Alu -28 283 1 467 312 40 6 chr2 4048084 4048257 -246639597 - MIR SINE MIR -26 236 58 334 274 150 65 chr2 4048769 4049109 -246638745 + MLT1E LTR MaLR 285 592 -1 273 270 108 9 chr2 4049194 4049305 -246638549 - MIR SINE MIR -59 149 28 654 228 206 9 chr2 4050429 4050648 -246637206 + MLT1L LTR MaLR 349 610 -5 497 298 44 39 chr2 4050750 4050955 -246636899 + MIR SINE MIR 47 252 -10 186 143 0 0 chr2 4051803 4051838 -246636016 + (CCCA)n Simple_repeat Simple_repeat 4 38 0 372 274 177 26 chr2 4052623 4052933 -246634921 + MARNA DNA Mariner 26 382 -204 837 274 95 3 chr2 4053715 4054094 -246633760 + L1MDa LINE L1 16 429 -6111 2243 201 52 17 chr2 4054329 4054847 -246633007 + L1MC1 LINE L1 5786 6321 -12 272 245 13 8 chr2 4055007 4055103 -246632751 - MLT1J2 LTR MaLR -309 141 70 323 158 11 116 chr2 4055226 4055292 -246632562 - L1PA15 LINE L1 -172 5993 5938 2336 86 3 29 chr2 4055292 4055606 -246632248 - AluSx SINE Alu -6 306 1 323 158 11 116 chr2 4055606 4055634 -246632220 - L1PA15 LINE L1 -227 5938 5909 948 153 25 0 chr2 4055642 4055805 -246632049 + L1PA15 LINE L1 5995 6161 -4 23 0 0 0 chr2 4055806 4055829 -246632025 + AT_rich Low_complexity Low_complexity 1 23 0 23 68 0 0 chr2 4057998 4058042 -246629812 + AT_rich Low_complexity Low_complexity 1 44 0 2015 66 4 0 chr2 4058518 4058775 -246629079 - L1PA5 LINE L1 0 6154 5897 320 124 8 63 chr2 4059091 4059163 -246628691 + MLT1A2 LTR MaLR 1 67 -307 1578 222 18 0 chr2 4059166 4059499 -246628355 - MER47A DNA MER2_type 0 366 28 1210 198 62 21 chr2 4059516 4059804 -246628050 + MLT1A2 LTR MaLR 75 374 0 1637 126 20 0 chr2 4064535 4064782 -246623072 + MER1B DNA MER1_type 1 252 -87 293 259 77 21 chr2 4064898 4065041 -246622813 + ERVL LTR ERVL 2543 2693 -3071 569 210 109 0 chr2 4065081 4065219 -246622635 + MER58C DNA MER1_type 61 213 -2 365 314 26 0 chr2 4066264 4066420 -246621434 + ERVL LTR ERVL 3153 3312 -2342 358 154 15 70 chr2 4066552 4066900 -246620954 + (CTCA)n Simple_repeat Simple_repeat 1 328 0 431 329 7 0 chr2 4067164 4067319 -246620535 + ERVL LTR ERVL 3777 3932 -1832 255 145 197 40 chr2 4067594 4067637 -246620217 + LTR33A LTR ERVL 434 469 -54 15088 127 22 17 chr2 4067637 4070043 -246617811 - Tigger1 DNA MER2_type 0 2418 1 255 145 197 40 chr2 4070043 4070075 -246617779 + LTR33A LTR ERVL 469 521 -2 199 377 8 16 chr2 4070127 4070249 -246617605 - L2 LINE L2 -950 2364 2244 710 327 111 44 chr2 4070360 4071306 -246616548 + L1MEd LINE L1 79 1087 -5032 548 296 145 88 chr2 4071359 4072253 -246615601 + L1MEd LINE L1 1234 2178 -4132 564 89 0 0 chr2 4072406 4072485 -246615369 + (GGGA)n Simple_repeat Simple_repeat 3 81 0 2370 156 19 28 chr2 4073343 4073540 -246614314 + MSTB LTR MaLR 2 199 -227 1881 124 6 70 chr2 4073540 4073684 -246614170 + AluSx SINE Alu 3 155 -157 2290 108 0 0 chr2 4073684 4073989 -246613865 + AluSx SINE Alu 1 305 -7 1881 124 6 70 chr2 4073989 4074174 -246613680 + AluSx SINE Alu 155 311 -1 2370 156 19 28 chr2 4074174 4074405 -246613449 + MSTB LTR MaLR 199 426 0 7793 184 61 9 chr2 4074407 4075975 -246611879 + MSTB-int LTR MaLR 3 1651 0 2023 162 70 15 chr2 4075975 4076377 -246611477 + MSTB LTR MaLR 1 424 -2 209 289 64 80 chr2 4076810 4076997 -246610857 - MIR3 SINE MIR -17 191 8 259 320 150 10 chr2 4077281 4077481 -246610373 + MIR SINE MIR 32 259 -3 2298 124 0 0 chr2 4077681 4077987 -246609867 + AluSx SINE Alu 1 306 -6 2531 131 48 15 chr2 4078253 4078826 -246609028 + MER4E LTR ERV1 1 756 -10 2475 209 48 52 chr2 4079702 4080414 -246607440 + L1MD2 LINE L1 5650 6358 -1 2303 107 13 0 chr2 4080550 4080850 -246607004 - AluSx SINE Alu -4 308 5 237 351 0 11 chr2 4081168 4081262 -246606592 + (CA)n Simple_repeat Simple_repeat 2 94 0 247 316 94 0 chr2 4081769 4081886 -246605968 + L2 LINE L2 3140 3267 -5 243 0 0 0 chr2 4084290 4084317 -246603537 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 803 257 72 61 chr2 4085001 4085495 -246602359 + L1ME LINE L1 28 5189 -957 2284 105 0 0 chr2 4085582 4085868 -246601986 + AluSg SINE Alu 1 286 -24 393 75 0 0 chr2 4085871 4085924 -246601930 + (GGGA)n Simple_repeat Simple_repeat 4 56 0 1202 234 49 28 chr2 4085941 4086384 -246601470 + L1ME LINE L1 5188 5638 -528 718 341 63 14 chr2 4086751 4087246 -246600608 + HERV16 LTR ERVL 1765 2283 -3481 716 347 63 6 chr2 4087319 4087682 -246600172 + HERV16 LTR ERVL 2357 2740 -2256 349 309 18 18 chr2 4087809 4087919 -246599935 + HERV16 LTR ERVL 2953 3062 -1934 428 336 77 6 chr2 4087980 4088343 -246599511 + HERV16 LTR ERVL 3143 3531 -1954 2153 164 59 82 chr2 4089224 4089784 -246598070 - L1MA8 LINE L1 -17 6274 5728 2214 62 29 0 chr2 4090056 4090356 -246597498 - AluSg SINE Alu 0 308 1 487 249 40 57 chr2 4091100 4091277 -246596577 - MIR3 SINE MIR -1 207 34 253 274 38 28 chr2 4092481 4092587 -246595267 + HERV16 LTR ERVL 2046 2152 -2844 313 163 35 47 chr2 4094487 4094573 -246593281 + MIR SINE MIR 60 144 -118 786 61 0 0 chr2 4096349 4096448 -246591406 - THE1A LTR MaLR -256 99 1 855 226 79 39 chr2 4096589 4096868 -246590986 - L1MB2 LINE L1 -53 6118 5829 926 170 0 0 chr2 4096948 4097089 -246590765 + AluJb SINE Alu 1 141 -171 2313 108 0 0 chr2 4097094 4097390 -246590464 + AluY SINE Alu 1 296 -15 2228 49 0 0 chr2 4097421 4097708 -246590146 + L1PA8 LINE L1 5885 6171 -1 1195 149 0 0 chr2 4097786 4097960 -246589894 + AluJb SINE Alu 129 302 -10 230 290 86 11 chr2 4097972 4098065 -246589789 - MLT1D LTR MaLR 0 505 406 * 889 251 146 25 chr2 4098060 4098466 -246589388 - MLT1E2 LTR MaLR -154 470 9 364 334 58 8 chr2 4098495 4098785 -246589069 - L2 LINE L2 -220 3052 2687 2940 197 20 6 chr2 4101034 4101685 -246586169 + L1MB3 LINE L1 5520 6179 -4 251 228 0 0 chr2 4102145 4102202 -246585652 + L1MB7 LINE L1 5350 5406 -764 233 186 0 0 chr2 4102237 4102280 -246585574 + L1MB7 LINE L1 5364 5406 -764 225 209 0 0 chr2 4102319 4102362 -246585492 + L1MB7 LINE L1 5364 5406 -764 1133 195 8 7 chr2 4102402 4102656 -246585198 + L1MB7 LINE L1 5363 5585 -599 2299 116 0 26 chr2 4102671 4102725 -246585129 - L1PB1 LINE L1 -2 6149 6095 2323 114 0 0 chr2 4102725 4103031 -246584823 - AluSx SINE Alu -6 306 1 2299 116 0 26 chr2 4103031 4103354 -246584500 - L1PB1 LINE L1 -56 6095 5782 419 234 43 21 chr2 4103354 4103439 -246584415 + L1MC4 LINE L1 6614 6703 -1339 1270 73 0 6 chr2 4103439 4103616 -246584238 - L1PB1 LINE L1 -359 5792 5617 * 1798 251 38 36 chr2 4103611 4104015 -246583839 + L1MB7 LINE L1 5591 5998 -186 1704 122 35 52 chr2 4104015 4104301 -246583553 + AluJb SINE Alu 6 286 -26 1798 251 38 36 chr2 4104301 4104477 -246583377 + L1MB7 LINE L1 5998 6172 -12 2246 93 0 0 chr2 4104514 4104793 -246583061 - AluSc SINE Alu -30 279 1 506 237 0 0 chr2 4105544 4105798 -246582056 + (CA)n Simple_repeat Simple_repeat 1 254 0 195 250 0 0 chr2 4105822 4105922 -246581932 + (CA)n Simple_repeat Simple_repeat 1 100 0 336 222 3 45 chr2 4105970 4106351 -246581503 + (CA)n Simple_repeat Simple_repeat 1 364 0 200 275 17 6 chr2 4106406 4106584 -246581270 + (CA)n Simple_repeat Simple_repeat 1 180 0 305 290 196 0 chr2 4107311 4107449 -246580405 - MIR SINE MIR -20 242 78 288 295 95 0 chr2 4109789 4109894 -246577960 + L2 LINE L2 3108 3222 -50 280 252 0 15 chr2 4111553 4111684 -246576170 + (CA)n Simple_repeat Simple_repeat 1 129 0 566 268 82 55 chr2 4112211 4112431 -246575423 + MIR SINE MIR 20 245 -17 353 336 34 0 chr2 4113911 4114060 -246573794 + MIR SINE MIR 58 211 -51 412 280 177 0 chr2 4114316 4114491 -246573363 + MIR SINE MIR 57 262 0 8801 101 4 4 chr2 4316166 4317449 -246370405 - L1P LINE L1 -1759 4387 3105 205 196 11 11 chr2 4317551 4317643 -246370211 + (CATTC)n Satellite Satellite 3 94 0 731 175 0 29 chr2 4317654 4318174 -246369680 + (CATTC)n Satellite Satellite 1 505 0 709 177 2 2 chr2 4318228 4318734 -246369120 + (CATTC)n Satellite Satellite 1 506 0 389 178 8 0 chr2 4318747 4318865 -246368989 + (CATTC)n Satellite Satellite 3 121 0 181 266 166 71 chr2 4319513 4319821 -246368033 - L3 LINE CR1 -246 1331 995 366 42 0 0 chr2 4319911 4319959 -246367895 + (CA)n Simple_repeat Simple_repeat 1 48 0 24 53 0 0 chr2 4319996 4320034 -246367820 + AT_rich Low_complexity Low_complexity 1 38 0 422 264 4 16 chr2 4320058 4320301 -246367553 - L1MA9 LINE L1 -38 6274 5989 228 67 0 0 chr2 4320448 4320478 -246367376 + (TA)n Simple_repeat Simple_repeat 2 31 0 2242 108 0 0 chr2 4321161 4321458 -246366396 + AluSg SINE Alu 6 302 -8 27 29 0 0 chr2 4321458 4321492 -246366362 + AT_rich Low_complexity Low_complexity 1 34 0 290 247 47 12 chr2 4321759 4321844 -246366010 + MIR SINE MIR 104 191 -71 415 217 12 12 chr2 4321855 4321938 -246365916 + MER30 DNA MER1_type 148 230 0 265 312 35 29 chr2 4321955 4322128 -246365726 + L1MEc LINE L1 1908 2081 -4315 763 216 161 6 chr2 4322288 4322609 -246365245 - Tigger6 DNA MER2_type 0 1597 1148 11792 153 32 5 chr2 4322653 4322986 -246364868 + Tigger1 DNA MER2_type 1 324 -2094 2183 125 143 8 chr2 4322986 4323363 -246364491 + MSTA LTR MaLR 1 428 0 11792 153 32 5 chr2 4323363 4325009 -246362845 + Tigger1 DNA MER2_type 324 2033 -385 3554 194 28 14 chr2 4325110 4326333 -246361521 - L1MA9 LINE L1 -432 5880 4636 1651 174 57 3 chr2 4326333 4326615 -246361239 + AluSp SINE Alu 1 297 -16 3554 194 28 14 chr2 4326615 4326743 -246361111 - L1MA9 LINE L1 -1676 4636 4511 293 0 27 0 chr2 4326745 4326782 -246361072 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 4582 17 0 0 chr2 4326782 4327304 -246360550 - L1PA2 LINE L1 -13 6142 5621 3081 15 0 0 chr2 4327304 4327691 -246360163 + L1PA2 LINE L1 5227 5613 -542 1227 183 28 37 chr2 4327687 4327882 -246359972 - L1MA9 LINE L1 -1624 4522 4330 * 2159 122 0 0 chr2 4327882 4328177 -246359677 + AluSx SINE Alu 11 305 -7 1227 183 28 37 chr2 4328177 4328303 -246359551 - L1MA9 LINE L1 -1816 4330 4204 368 241 127 16 chr2 4328511 4328756 -246359098 - L1M4 LINE L1 -3070 3076 2805 308 347 141 38 chr2 4329268 4329637 -246358217 - L2 LINE L2 -4 3268 2862 1711 164 66 101 chr2 4329847 4330273 -246357581 - MSTB LTR MaLR -15 411 1 359 352 73 24 chr2 4330859 4331106 -246356748 - L2 LINE L2 -468 2846 2588 1106 264 151 37 chr2 4331120 4331540 -246356314 + MLT2B1 LTR ERVL 3 482 -38 955 89 13 0 chr2 4331540 4331697 -246356157 + (TCTA)n Simple_repeat Simple_repeat 4 162 0 1106 264 151 37 chr2 4331697 4331741 -246356113 + MLT2B1 LTR ERVL 482 520 0 3531 176 42 90 chr2 4332094 4333365 -246354489 + L1PB3 LINE L1 4942 6154 0 2185 92 0 7 chr2 4334314 4334608 -246353246 + AluSc SINE Alu 1 292 -17 249 378 44 7 chr2 4335223 4335358 -246352496 + MIR SINE MIR 46 185 -77 206 62 31 0 chr2 4335554 4335586 -246352268 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 243 136 45 0 chr2 4335587 4335631 -246352223 - MER5B DNA MER1_type -132 46 1 327 280 64 45 chr2 4335659 4335816 -246352038 - MER105 DNA DNA -1 203 44 457 282 48 62 chr2 4335880 4336089 -246351765 + MER63A DNA MER1_type 2 207 -3 200 322 67 22 chr2 4336662 4336752 -246351102 + L3 LINE CR1 1169 1262 -315 432 294 32 24 chr2 4336854 4336980 -246350874 + L3 LINE CR1 1450 1576 -1 607 116 45 18 chr2 4337349 4337461 -246350393 + L1PB2 LINE L1 5677 5791 -360 254 160 13 53 chr2 4337573 4337648 -246350206 + (TA)n Simple_repeat Simple_repeat 1 72 0 2175 97 54 26 chr2 4337649 4337998 -246349856 + L1PB2 LINE L1 5789 6147 -4 1698 130 85 4 chr2 4338627 4338897 -246348957 - AluSx SINE Alu -12 300 9 315 273 0 0 chr2 4339354 4339431 -246348423 - L1MC4 LINE L1 -1350 6692 6616 27 29 0 0 chr2 4339464 4339498 -246348356 + AT_rich Low_complexity Low_complexity 1 34 0 184 344 16 88 chr2 4339561 4339686 -246348168 - MIR SINE MIR -59 149 34 24 32 0 0 chr2 4340329 4340360 -246347494 + AT_rich Low_complexity Low_complexity 1 31 0 207 315 82 86 chr2 4341629 4341896 -246345958 + L2 LINE L2 2228 2493 -821 229 316 158 8 chr2 4341962 4342095 -246345759 - MIR SINE MIR 0 262 110 234 354 85 0 chr2 4342287 4342369 -246345485 - L2 LINE L2 -12 3260 3172 27 0 0 0 chr2 4343928 4343955 -246343899 + AT_rich Low_complexity Low_complexity 1 27 0 6776 70 13 1 chr2 4344928 4346499 -246341355 - L1PA7 LINE L1 -4 6150 4564 16969 29 0 0 chr2 4346599 4349383 -246338471 + L1PA2 LINE L1 3372 6155 0 29 47 0 0 chr2 4349764 4349807 -246338047 + AT_rich Low_complexity Low_complexity 1 43 0 190 308 199 13 chr2 4350272 4350428 -246337426 + MIR SINE MIR 37 221 -41 220 363 12 0 chr2 4350664 4350744 -246337110 - L2 LINE L2 -212 3060 2980 1533 200 64 6 chr2 4352241 4352586 -246335268 + MLT2D LTR ERVL 1 365 -49 280 228 51 13 chr2 4353554 4353633 -246334221 + MIR SINE MIR 110 191 -71 944 270 58 70 chr2 4354149 4354649 -246333205 + MLT1L LTR MaLR 79 572 -43 792 253 13 17 chr2 4355134 4355367 -246332487 - MER72 LTR ERV1 -243 479 248 206 313 50 38 chr2 4357001 4357081 -246330773 - L2 LINE L2 -5 3267 3187 289 258 0 0 chr2 4357512 4357605 -246330249 - Charlie7 DNA MER1_type -1937 675 583 435 218 122 20 chr2 4357670 4357817 -246330037 - Charlie7 DNA MER1_type -2130 482 321 23 78 0 0 chr2 4357954 4358005 -246329849 + AT_rich Low_complexity Low_complexity 1 51 0 357 314 47 23 chr2 4358779 4358951 -246328903 + MIR SINE MIR 28 203 -59 875 254 6 0 chr2 4359698 4359879 -246327975 + MER5A DNA MER1_type 8 189 0 224 254 51 0 chr2 4360347 4360406 -246327448 - MIR SINE MIR -55 153 92 34 65 0 0 chr2 4360760 4360822 -246327032 + AT_rich Low_complexity Low_complexity 1 62 0 214 278 11 78 chr2 4360876 4360966 -246326888 + L2 LINE L2 3189 3272 0 1492 204 6 19 chr2 4362282 4362595 -246325259 - AluJb SINE Alu -1 311 3 255 247 78 26 chr2 4362635 4362712 -246325142 - MIR SINE MIR -179 83 3 255 321 46 30 chr2 4362834 4362965 -246324889 + MIR SINE MIR 99 231 -31 279 315 94 26 chr2 4365465 4365732 -246322122 - L1MEc LINE L1 -4579 1817 1533 675 212 0 0 chr2 4365753 4365871 -246321983 + FLAM_C SINE Alu 1 118 -15 319 270 86 40 chr2 4366016 4366190 -246321664 - L1M4 LINE L1 -2281 3865 3684 337 320 99 41 chr2 4366276 4366641 -246321213 - L1M4 LINE L1 -2642 3504 3119 289 289 41 38 chr2 4367154 4367420 -246320434 - L1M4 LINE L1 -3523 2623 2357 457 341 102 23 chr2 4369458 4369939 -246317915 - L1ME4a LINE L1 -24 6097 5579 1109 254 0 0 chr2 4370018 4370258 -246317596 + MLT1A1 LTR MaLR 125 364 -1 2131 155 111 5 chr2 4370413 4370800 -246317054 - MSTA LTR MaLR 0 428 1 8336 193 25 11 chr2 4370800 4372429 -246315425 - MSTA-int LTR MaLR 0 1651 1 1562 202 141 5 chr2 4372429 4372806 -246315048 - MSTA LTR MaLR 0 428 1 3523 278 49 43 chr2 4374363 4374423 -246313431 + L1M4 LINE L1 11 69 -6786 1572 206 0 3 chr2 4374423 4374735 -246313119 - AluJo SINE Alu 0 311 1 3523 278 49 43 chr2 4374735 4376423 -246311431 + L1M4 LINE L1 69 1792 -5063 1035 242 50 108 chr2 4376430 4377608 -246310246 + L1M4 LINE L1 2230 3265 -3692 1131 256 99 11 chr2 4377754 4377801 -246310053 + L1M4 LINE L1 3245 3286 -3671 4195 39 8 2 chr2 4377801 4378341 -246309513 + L1PA4 LINE L1 5621 6163 0 1131 256 99 11 chr2 4378341 4378816 -246309038 + L1M4 LINE L1 3286 3814 -3143 2727 225 19 0 chr2 4378879 4379391 -246308463 + L1P4 LINE L1 53 574 -6265 * 3594 228 50 27 chr2 4379380 4380536 -246307318 + L1P4 LINE L1 1849 3031 -3818 4035 203 48 14 chr2 4380536 4380805 -246307049 + L1P4 LINE L1 4935 5193 -1671 1825 176 80 5 chr2 4380805 4381203 -246306651 + MSTA LTR MaLR 1 428 0 4035 203 48 14 chr2 4381203 4382124 -246305730 + L1P4 LINE L1 5193 6163 -701 5011 148 17 1 chr2 4382224 4383057 -246304797 + L1PA16 LINE L1 5312 6157 -9 444 311 12 38 chr2 4383079 4383504 -246304350 + L1M4 LINE L1 3866 4279 -2678 2684 36 0 3 chr2 4383723 4384032 -246303822 - AluY SINE Alu -3 308 1 3987 20 0 0 chr2 4384423 4384881 -246302973 - L1PA3 LINE L1 0 6155 5698 5105 30 0 0 chr2 4384881 4385505 -246302349 + L1P LINE L1 4749 5372 -774 3297 137 32 35 chr2 4386068 4386668 -246301186 - Tigger1 DNA MER2_type 0 2418 1821 1585 85 89 4 chr2 4387535 4387781 -246300073 - L1PA11 LINE L1 -10 6164 5898 5661 156 60 9 chr2 4387781 4387896 -246299958 - Tigger1 DNA MER2_type -581 1837 1729 207 0 0 0 chr2 4387896 4387919 -246299935 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 5661 156 60 9 chr2 4387919 4389504 -246298350 - Tigger1 DNA MER2_type -689 1729 1 1651 201 3 7 chr2 4389537 4389835 -246298019 - AluJo SINE Alu -15 297 1 565 278 91 13 chr2 4390131 4390361 -246297493 - MLT1D LTR MaLR 0 505 258 307 294 134 21 chr2 4390475 4390669 -246297185 - LTR33 LTR ERVL -1 520 305 808 219 18 0 chr2 4390849 4391013 -246296841 - FRAM SINE Alu -9 167 1 241 295 79 43 chr2 4393249 4393388 -246294466 + L2 LINE L2 3128 3271 -1 317 185 64 25 chr2 4393428 4393585 -246294269 + (TG)n Simple_repeat Simple_repeat 1 163 0 216 47 78 47 chr2 4393595 4393659 -246294195 + (GTGTG)n Simple_repeat Simple_repeat 4 69 0 482 131 48 51 chr2 4393715 4394008 -246293846 + (GTGTG)n Simple_repeat Simple_repeat 1 292 0 437 97 30 67 chr2 4394021 4394186 -246293668 + (GTGTG)n Simple_repeat Simple_repeat 1 159 0 1135 218 44 21 chr2 4394694 4395028 -246292826 - MLT1A1 LTR MaLR -6 359 3 3801 182 14 7 chr2 4395116 4395826 -246292028 - MER72 LTR ERV1 0 722 8 332 133 84 12 chr2 4396746 4396829 -246291025 - L1P LINE L1 -2914 3232 3144 21 36 0 0 chr2 4396963 4396991 -246290863 + AT_rich Low_complexity Low_complexity 1 28 0 435 294 91 67 chr2 4397301 4397879 -246289975 - L1MC4 LINE L1 0 8042 7311 670 217 88 17 chr2 4397901 4398223 -246289631 + MLT1C LTR MaLR 1 373 -94 228 135 19 58 chr2 4398227 4398279 -246289575 + MLT1C LTR MaLR 336 385 -5 2814 131 7 0 chr2 4398284 4398711 -246289143 + MER57B LTR ERV1 5 434 0 234 261 143 62 chr2 4398755 4398916 -246288938 - L1MC4a LINE L1 -470 7338 7165 687 291 82 12 chr2 4399183 4399513 -246288341 - L1MC4 LINE L1 -985 7057 6705 1878 114 0 84 chr2 4400077 4400420 -246287434 - AluSx SINE Alu 0 317 1 748 221 63 0 chr2 4402565 4402723 -246285131 - FAM SINE Alu -7 168 1 357 222 28 46 chr2 4403140 4403248 -246284606 + MIR3 SINE MIR 97 202 -6 284 330 31 10 chr2 4403398 4403495 -246284359 + L2 LINE L2 3188 3286 -27 403 323 64 30 chr2 4404114 4404380 -246283474 - L1MEc LINE L1 -1800 4415 4141 654 304 48 23 chr2 4404504 4405069 -246282785 - L1MEc LINE L1 -2708 3507 2929 631 297 42 0 chr2 4405091 4405256 -246282598 + MER5A DNA MER1_type 4 175 -14 276 340 55 12 chr2 4405357 4405610 -246282244 - L1MEc LINE L1 -3427 2788 2525 2872 229 74 6 chr2 4405640 4406705 -246281149 - L1MB8 LINE L1 -14 6164 5027 31 0 0 0 chr2 4406708 4406739 -246281115 + AT_rich Low_complexity Low_complexity 1 31 0 297 308 117 10 chr2 4406769 4407256 -246280598 - L1MB8 LINE L1 -3486 2660 2122 517 269 39 6 chr2 4407310 4407466 -246280388 - L1MEc LINE L1 -4670 1726 1566 30 77 0 0 chr2 4408875 4408940 -246278914 + AT_rich Low_complexity Low_complexity 1 65 0 355 258 106 26 chr2 4409300 4409451 -246278403 - L1MEc LINE L1 -4913 1292 1130 2684 98 8 11 chr2 4409463 4409839 -246278015 - THE1C LTR MaLR 0 375 1 6831 113 39 137 chr2 4409866 4410728 -246277126 - THE1C-int LTR MaLR -303 1277 607 412 126 0 105 chr2 4410728 4410823 -246277031 - L1PA10 LINE L1 0 6168 6084 6831 113 39 137 chr2 4410823 4411376 -246276478 - THE1C-int LTR MaLR -973 607 1 2390 133 30 11 chr2 4411376 4411744 -246276110 - THE1C LTR MaLR 0 375 1 385 274 73 66 chr2 4411985 4412244 -246275610 - L1MEc LINE L1 -5278 927 667 2421 178 24 2 chr2 4412398 4412815 -246275039 + MSTB LTR MaLR 1 426 0 1226 225 107 24 chr2 4413593 4413931 -246273923 + MLT1B LTR MaLR 1 366 -24 1106 226 13 57 chr2 4413939 4414240 -246273614 + MLT1A2 LTR MaLR 74 361 -13 2327 110 0 0 chr2 4414511 4414821 -246273033 - AluSx SINE Alu -2 310 1 606 315 36 9 chr2 4415014 4415233 -246272621 - MIR SINE MIR -32 230 6 276 77 0 0 chr2 4416432 4416471 -246271383 + (TTTTC)n Simple_repeat Simple_repeat 2 40 0 215 329 89 13 chr2 4418222 4418301 -246269553 + MIR SINE MIR 25 109 -153 272 309 9 27 chr2 4419598 4419708 -246268146 - MLT1F LTR MaLR -82 460 353 521 252 65 0 chr2 4419791 4419930 -246267924 + MSTD LTR MaLR 1 148 -217 668 178 17 0 chr2 4419961 4420079 -246267775 + MSTD LTR MaLR 265 384 -12 429 320 35 58 chr2 4420158 4420417 -246267437 + MIR SINE MIR 10 262 0 200 294 11 43 chr2 4421352 4421536 -246266318 + (CATG)n Simple_repeat Simple_repeat 1 178 0 188 229 42 0 chr2 4423646 4423694 -246264160 - MIR3 SINE MIR -39 169 120 198 103 0 0 chr2 4424109 4424138 -246263716 + (TC)n Simple_repeat Simple_repeat 2 30 0 315 0 0 0 chr2 4424191 4424226 -246263628 + (CA)n Simple_repeat Simple_repeat 2 36 0 1924 186 38 22 chr2 4424995 4425442 -246262412 - L1MA8 LINE L1 -6 6285 5832 2183 157 10 15 chr2 4425442 4425831 -246262023 + L1MA8 LINE L1 5450 5836 -476 1670 146 143 32 chr2 4425914 4426257 -246261597 + MSTA LTR MaLR 19 399 -29 288 0 0 0 chr2 4426257 4426289 -246261565 + (TTA)n Simple_repeat Simple_repeat 2 33 0 5279 91 5 11 chr2 4426289 4427040 -246260814 - L1PA8 LINE L1 -11 6161 5415 525 77 0 0 chr2 4427518 4427583 -246260271 - MER30B DNA MER1_type -125 65 1 342 0 0 0 chr2 4427763 4427801 -246260053 + (TA)n Simple_repeat Simple_repeat 2 39 0 182 292 0 0 chr2 4429841 4429889 -246257965 + L2 LINE L2 3210 3257 -15 1831 214 82 52 chr2 4430568 4430676 -246257178 - L1ME1 LINE L1 -237 5998 5895 1951 125 3 30 chr2 4430676 4430972 -246256882 - AluSx SINE Alu -7 305 18 1831 214 82 52 chr2 4430972 4431426 -246256428 - L1ME1 LINE L1 -340 5895 5456 1925 148 0 0 chr2 4431426 4431732 -246256122 - AluSx SINE Alu 0 306 1 1831 214 82 52 chr2 4431732 4432112 -246255742 - L1ME1 LINE L1 -779 5456 5012 1151 279 38 18 chr2 4432108 4432656 -246255198 - L1ME1 LINE L1 -1647 4568 4010 * 274 269 19 28 chr2 4433030 4433138 -246254716 - L1M4 LINE L1 -969 5177 5071 2831 274 66 37 chr2 4433399 4435183 -246252671 - L1ME1 LINE L1 -2309 3906 2063 315 49 0 0 chr2 4435183 4435224 -246252630 + (TG)n Simple_repeat Simple_repeat 2 42 0 2831 274 66 37 chr2 4435224 4436342 -246251512 - L1ME1 LINE L1 -4152 2063 979 358 324 41 82 chr2 4436364 4436805 -246251049 - L1ME1 LINE L1 -5453 943 521 184 185 37 0 chr2 4438422 4438476 -246249378 + (CATATA)n Simple_repeat Simple_repeat 3 58 0 2239 108 3 0 chr2 4438815 4439112 -246248742 + AluSx SINE Alu 1 298 -14 465 342 129 32 chr2 4439413 4440243 -246247611 - L2 LINE L2 -653 2661 1752 286 278 35 28 chr2 4440371 4440515 -246247339 + L1MB8 LINE L1 93 237 -6622 305 301 65 75 chr2 4441002 4441188 -246246666 + L1MB8 LINE L1 1253 1436 -5511 1603 161 68 37 chr2 4441253 4441577 -246246277 + MER1B DNA MER1_type 4 337 0 1500 288 87 23 chr2 4441600 4442360 -246245494 + L1MB8 LINE L1 1380 2209 -4750 1805 167 7 10 chr2 4442360 4442660 -246245194 + AluJo SINE Alu 1 299 -13 1500 288 87 23 chr2 4442660 4442804 -246245050 + L1MB8 LINE L1 2209 2342 -4617 192 125 0 0 chr2 4442927 4442959 -246244895 + (CA)n Simple_repeat Simple_repeat 1 32 0 1497 270 80 32 chr2 4443100 4444372 -246243482 + L1MB8 LINE L1 2619 3927 -3030 * 1988 212 75 8 chr2 4444350 4444873 -246242981 + L1MB8 LINE L1 6197 6754 -235 1791 137 0 50 chr2 4444939 4445267 -246242587 - AluSq SINE Alu 0 313 1 2330 99 3 3 chr2 4446931 4447235 -246240619 + AluSp SINE Alu 1 304 -9 226 272 150 27 chr2 4447546 4447693 -246240161 + MIR SINE MIR 73 237 -25 342 247 139 38 chr2 4447977 4448135 -246239719 - MIR SINE MIR -42 220 47 1807 231 73 47 chr2 4448140 4448756 -246239098 + L1MC3 LINE L1 7153 7784 -1 2007 99 21 18 chr2 4449108 4449430 -246238424 + AluSg SINE Alu 1 323 0 857 161 61 11 chr2 4449533 4449713 -246238141 - L1MA8 LINE L1 -100 6191 6003 359 294 73 34 chr2 4450871 4451048 -246236806 - MIR SINE MIR 0 262 79 481 55 27 0 chr2 4451078 4451151 -246236703 + (TAGA)n Simple_repeat Simple_repeat 4 78 0 1268 219 91 17 chr2 4451210 4451561 -246236293 - MLT2C1 LTR ERVL -20 377 1 1653 210 3 0 chr2 4451839 4452130 -246235724 + AluJo SINE Alu 1 292 -20 306 314 0 0 chr2 4452135 4452221 -246235633 - L1MC4 LINE L1 -1343 6699 6614 204 200 0 0 chr2 4452225 4452270 -246235584 + (TA)n Simple_repeat Simple_repeat 1 45 0 1108 192 39 13 chr2 4452297 4452526 -246235328 - MER46A DNA MER2_type -1 235 1 2032 154 3 0 chr2 4452729 4453034 -246234820 + AluSq SINE Alu 1 306 -7 356 250 21 21 chr2 4453035 4453175 -246234679 - L1MC4 LINE L1 -1 8041 7902 248 245 0 0 chr2 4453176 4453229 -246234625 + (CATATA)n Simple_repeat Simple_repeat 5 57 0 239 214 0 0 chr2 4453229 4453285 -246234569 - L1MC4 LINE L1 -1339 6703 6648 472 248 18 69 chr2 4453318 4453550 -246234304 - L1MC4 LINE L1 -100 7708 7585 218 289 0 24 chr2 4455217 4455300 -246232554 + CT-rich Low_complexity Low_complexity 2 82 0 569 362 138 23 chr2 4455332 4455673 -246232181 - L2 LINE L2 -2064 1250 829 1307 137 64 0 chr2 4455673 4455892 -246231962 - L1PA11 LINE L1 -2 6172 5940 569 362 138 23 chr2 4455892 4456064 -246231790 - L2 LINE L2 -2485 829 678 1605 181 6 33 chr2 4456476 4456549 -246231305 - L1MC2 LINE L1 -16 6328 6255 2254 118 37 11 chr2 4456549 4456904 -246230950 + THE1B LTR MaLR 1 364 0 1605 181 6 33 chr2 4456904 4457162 -246230692 - L1MC2 LINE L1 -89 6255 6006 508 286 158 22 chr2 4457344 4457655 -246230199 + LTR16A LTR ERVL 93 445 -5 888 186 0 13 chr2 4458103 4458259 -246229595 - FRAM SINE Alu -17 159 6 300 191 0 44 chr2 4459649 4459785 -246228069 + (TA)n Simple_repeat Simple_repeat 2 131 0 1584 207 13 10 chr2 4462003 4462303 -246225551 + AluJb SINE Alu 1 301 -11 24 0 0 0 chr2 4462620 4462644 -246225210 + AT_rich Low_complexity Low_complexity 1 24 0 1944 152 39 17 chr2 4462671 4463027 -246224827 - THE1B LTR MaLR 0 364 1 1592 127 0 9 chr2 4463818 4464047 -246223807 - AluSg/x SINE Alu -8 302 76 888 258 24 0 chr2 4464539 4464748 -246223106 + MER20 DNA MER1_type 6 219 0 458 227 47 7 chr2 4465292 4465442 -246222412 + Charlie5 DNA MER1_type 2469 2624 0 306 0 0 0 chr2 4466074 4466108 -246221746 + (TAAA)n Simple_repeat Simple_repeat 1 34 0 529 217 83 64 chr2 4466109 4466266 -246221588 + AluJb SINE Alu 136 295 -17 1645 121 22 0 chr2 4471025 4471256 -246216598 - AluSx SINE Alu -14 298 63 246 273 175 13 chr2 4472149 4472303 -246215551 - L1MC2 LINE L1 -2055 5753 5575 337 278 151 50 chr2 4472380 4472818 -246215036 + L1M4 LINE L1 3346 3863 -2283 2144 110 0 23 chr2 4472818 4473126 -246214728 + AluSg SINE Alu 1 301 -9 337 278 151 50 chr2 4473126 4473291 -246214563 + L1M4 LINE L1 3863 4010 -2136 224 209 0 0 chr2 4475144 4475187 -246212667 + GA-rich Low_complexity Low_complexity 1 43 0 2342 206 49 0 chr2 4475224 4475715 -246212139 - MLT2B2 LTR ERVL 0 515 1 180 125 0 0 chr2 4475939 4475971 -246211883 + (A)n Simple_repeat Simple_repeat 1 32 0 334 310 78 49 chr2 4476078 4476362 -246211492 - L1MC4a LINE L1 -1849 5959 5668 202 296 70 0 chr2 4476705 4476776 -246211078 - MIR SINE MIR -165 97 22 23 0 0 0 chr2 4477246 4477269 -246210585 + AT_rich Low_complexity Low_complexity 1 23 0 2385 96 0 0 chr2 4478427 4478729 -246209125 - AluSg SINE Alu -8 302 1 2088 150 0 0 chr2 4479835 4480135 -246207719 - AluSx SINE Alu -11 301 2 195 42 0 0 chr2 4481311 4481335 -246206519 + (T)n Simple_repeat Simple_repeat 1 24 0 336 209 77 44 chr2 4481564 4481655 -246206199 - L2 LINE L2 -20 3252 3159 227 360 12 12 chr2 4481825 4481911 -246205943 + L2 LINE L2 3227 3312 -1 206 327 72 39 chr2 4482200 4482408 -246205446 - L2 LINE L2 -1 3312 3098 488 205 60 30 chr2 4482731 4482897 -246204957 - MER58C DNA MER1_type -16 199 29 209 196 0 22 chr2 4482990 4483036 -246204818 + CT-rich Low_complexity Low_complexity 3 47 0 242 292 35 53 chr2 4483471 4483584 -246204270 + MIR SINE MIR 46 156 -106 4459 228 75 92 chr2 4484213 4487104 -246200750 + L1ME3A LINE L1 2194 5035 -1111 357 251 18 90 chr2 4487120 4487242 -246200612 + L1ME3A LINE L1 5772 5880 -290 1804 187 7 0 chr2 4487242 4487547 -246200307 + AluJb SINE Alu 1 307 -5 357 251 18 90 chr2 4487547 4487591 -246200263 + L1ME3A LINE L1 5880 5926 -244 556 228 122 6 chr2 4488216 4488396 -246199458 + MLT1J LTR MaLR 1 201 -310 244 252 205 39 chr2 4488711 4488838 -246199016 + MLT1J LTR MaLR 356 503 -8 426 307 95 35 chr2 4489464 4489780 -246198074 + LTR16C LTR ERVL 146 480 -11 27 0 0 0 chr2 4489813 4489840 -246198014 + AT_rich Low_complexity Low_complexity 1 27 0 189 309 81 24 chr2 4490192 4490315 -246197539 - MIR SINE MIR -14 248 119 2478 108 8 5 chr2 4490702 4491073 -246196781 - L1PA14 LINE L1 -3 6158 5787 283 315 72 9 chr2 4491086 4491197 -246196657 - MIR SINE MIR -60 148 31 200 208 0 38 chr2 4491365 4491418 -246196436 + CT-rich Low_complexity Low_complexity 4 54 0 221 307 94 45 chr2 4491638 4491882 -246195972 - L2 LINE L2 -354 2960 2705 192 356 87 67 chr2 4492282 4492535 -246195319 + L2 LINE L2 2953 3210 -62 306 294 61 81 chr2 4494231 4494428 -246193426 - MIR3 SINE MIR -9 199 7 28 0 0 0 chr2 4494436 4494464 -246193390 + AT_rich Low_complexity Low_complexity 1 28 0 202 283 0 0 chr2 4494614 4494674 -246193180 + (CATA)n Simple_repeat Simple_repeat 3 62 0 443 339 155 13 chr2 4494717 4495092 -246192762 - L3 LINE CR1 -112 1465 1038 351 0 0 0 chr2 4495196 4495235 -246192619 + (CA)n Simple_repeat Simple_repeat 2 40 0 182 262 107 0 chr2 4495429 4495513 -246192341 - L3 LINE CR1 -858 719 627 29 28 0 0 chr2 4495604 4495640 -246192214 + AT_rich Low_complexity Low_complexity 1 36 0 7904 94 0 0 chr2 4496153 4497246 -246190608 - L1P3 LINE L1 -4788 1673 581 6912 109 7 12 chr2 4497243 4498342 -246189512 + L1P LINE L1 1936 3029 -3117 * 2930 176 4 13 chr2 4498636 4499181 -246188673 - L1PA16 LINE L1 -10 6156 5617 2430 174 70 42 chr2 4499225 4499547 -246188307 - MLT2B3 LTR ERVL -8 546 202 207 0 0 0 chr2 4499547 4499570 -246188284 + (GA)n Simple_repeat Simple_repeat 2 24 0 2430 174 70 42 chr2 4499570 4499777 -246188077 - MLT2B3 LTR ERVL -352 202 2 3663 245 31 27 chr2 4499804 4501535 -246186319 + L1MB7 LINE L1 3997 5754 -430 559 77 26 0 chr2 4501535 4501613 -246186241 + MADE1 DNA Mariner 1 80 0 3663 245 31 27 chr2 4501613 4501946 -246185908 + L1MB7 LINE L1 5754 6084 -100 319 323 90 26 chr2 4502375 4502564 -246185290 + MIR SINE MIR 11 211 -51 419 291 99 6 chr2 4502728 4502910 -246184944 - LTR50 LTR ERVL -126 669 471 466 246 123 45 chr2 4502980 4503224 -246184630 - LTR50 LTR ERVL -532 263 1 1874 159 11 0 chr2 4503463 4503746 -246184108 + AluSx SINE Alu 1 286 -26 3914 157 24 10 chr2 4503995 4504708 -246183146 + MER50 LTR ERV1 1 723 -11 689 297 53 28 chr2 4504813 4505210 -246182644 + LTR16B LTR ERVL 37 443 -21 3384 200 67 4 chr2 4505261 4506037 -246181817 - L1MB8 LINE L1 -6 6172 5348 1403 147 0 32 chr2 4506073 4506291 -246181563 - AluSg/x SINE Alu -16 296 86 273 226 0 0 chr2 4506291 4506344 -246181510 - L1M4b LINE L1 -5898 961 909 471 218 0 10 chr2 4506353 4506454 -246181400 + Tigger2a DNA MER2_type 1 100 -334 2042 234 102 22 chr2 4506454 4507124 -246180730 - MER50 LTR ERV1 0 734 12 2105 149 6 3 chr2 4507128 4507478 -246180376 + Tigger2a DNA MER2_type 94 444 0 757 305 59 25 chr2 4507489 4507896 -246179958 - L1M4b LINE L1 -5968 891 471 444 282 169 23 chr2 4507934 4508200 -246179654 - L1M4b LINE L1 -6480 379 75 243 304 29 0 chr2 4508671 4508740 -246179114 - MIR3 SINE MIR -27 181 111 342 256 277 0 chr2 4508972 4509109 -246178745 + MER5B DNA MER1_type 1 175 -3 269 303 111 0 chr2 4509923 4510022 -246177832 - MIR SINE MIR -61 147 38 236 309 48 40 chr2 4510046 4510172 -246177682 + L2 LINE L2 3144 3270 -2 435 343 48 6 chr2 4510492 4510658 -246177196 + MER5B DNA MER1_type 6 178 0 758 154 155 2 chr2 4512653 4512876 -246174978 + L1MA9 LINE L1 6055 6312 0 2152 102 78 90 chr2 4512969 4513402 -246174452 + MSTA LTR MaLR 1 428 0 333 118 0 0 chr2 4513502 4513513 -246174341 + (TG)n Simple_repeat Simple_repeat 1 62 0 333 118 0 0 chr2 4513513 4513564 -246174290 + (TG)n Simple_repeat Simple_repeat 2 52 0 492 311 53 21 chr2 4514823 4515013 -246172841 - MIR SINE MIR -44 218 23 2576 162 80 53 chr2 4515135 4515722 -246172132 - MER6A DNA MER2_type 0 605 3 636 270 76 8 chr2 4515968 4516176 -246171678 - MIR SINE MIR -49 213 1 21 0 0 0 chr2 4516418 4516439 -246171415 + AT_rich Low_complexity Low_complexity 1 21 0 286 286 29 6 chr2 4517739 4517914 -246169940 + (TA)n Simple_repeat Simple_repeat 2 180 0 207 0 0 0 chr2 4518042 4518065 -246169789 + (A)n Simple_repeat Simple_repeat 1 23 0 2053 121 16 7 chr2 4518331 4518660 -246169194 + AluSx SINE Alu 1 312 0 328 299 142 0 chr2 4518757 4518891 -246168963 - MIR SINE MIR -5 257 105 223 200 17 17 chr2 4518916 4518976 -246168878 + T-rich Low_complexity Low_complexity 1 60 0 29 47 0 0 chr2 4519566 4519609 -246168245 + AT_rich Low_complexity Low_complexity 1 43 0 2593 40 0 0 chr2 4521392 4521689 -246166165 - AluY SINE Alu -14 297 1 351 107 40 0 chr2 4522418 4522493 -246165361 + (CA)n Simple_repeat Simple_repeat 2 79 0 213 39 0 0 chr2 4522993 4523019 -246164835 + (T)n Simple_repeat Simple_repeat 1 26 0 1165 225 40 25 chr2 4523093 4523418 -246164436 - MER93a LTR ERV1 -10 392 63 336 167 0 0 chr2 4523526 4523598 -246164256 + T-rich Low_complexity Low_complexity 1 72 0 241 466 8 0 chr2 4524210 4524328 -246163526 + L2 LINE L2 3141 3259 -13 33 25 0 0 chr2 4524721 4524761 -246163093 + AT_rich Low_complexity Low_complexity 1 40 0 22 0 0 0 chr2 4524961 4524983 -246162871 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 4526203 4526225 -246161629 + AT_rich Low_complexity Low_complexity 1 22 0 2542 62 0 0 chr2 4526871 4527180 -246160674 - AluY SINE Alu -2 309 1 197 143 29 0 chr2 4527757 4527792 -246160062 + L2 LINE L2 3216 3251 -21 755 279 101 13 chr2 4527895 4528211 -246159643 - MLT1A1 LTR MaLR -2 363 20 317 248 8 0 chr2 4528460 4528589 -246159265 + (TG)n Simple_repeat Simple_repeat 1 130 0 180 217 0 0 chr2 4528631 4528677 -246159177 + (TG)n Simple_repeat Simple_repeat 1 46 0 25 0 0 0 chr2 4529544 4529569 -246158285 + AT_rich Low_complexity Low_complexity 1 25 0 190 360 73 40 chr2 4529613 4529763 -246158091 + MIR3 SINE MIR 22 176 -32 2729 229 30 30 chr2 4529938 4530775 -246157079 - L1MD1 LINE L1 -2 6240 5404 1187 186 11 30 chr2 4530777 4531041 -246156813 + MLT1B LTR MaLR 3 261 -129 710 109 0 10 chr2 4581043 4581144 -246106710 - AluS SINE Alu -212 101 2 514 271 65 28 chr2 4581217 4581431 -246106423 - MIR SINE MIR -1 261 40 1732 175 14 14 chr2 4581631 4581928 -246105926 - AluJb SINE Alu -15 297 1 2085 166 48 45 chr2 4583847 4584203 -246103651 + LTR18A LTR ERVL 1 357 0 2295 12 0 0 chr2 4584652 4584902 -246102952 + AluYa5 SINE Alu 62 311 0 181 125 42 28 chr2 4585150 4585222 -246102632 + (TA)n Simple_repeat Simple_repeat 1 73 0 229 165 39 10 chr2 4585266 4585369 -246102485 + (TA)n Simple_repeat Simple_repeat 2 107 0 28 0 0 0 chr2 4585444 4585472 -246102382 + AT_rich Low_complexity Low_complexity 1 28 0 222 121 0 121 chr2 4586666 4586724 -246101130 + L2 LINE L2 3222 3272 0 272 212 61 0 chr2 4586768 4586781 -246101073 + MER3 DNA MER1_type 32 48 -161 612 204 32 51 chr2 4586781 4586938 -246100916 - MER3 DNA MER1_type 0 209 56 3571 75 23 0 chr2 4588783 4589226 -246098628 - MLT2A2 LTR ERVL 0 453 1 37 76 0 0 chr2 4589373 4589452 -246098402 + AT_rich Low_complexity Low_complexity 1 79 0 190 205 26 0 chr2 4589462 4589540 -246098314 + (TA)n Simple_repeat Simple_repeat 2 81 0 34 0 0 0 chr2 4589540 4589574 -246098280 + AT_rich Low_complexity Low_complexity 1 34 0 504 171 29 6 chr2 4589613 4589788 -246098066 + (TA)n Simple_repeat Simple_repeat 1 179 0 2929 203 83 36 chr2 4591067 4591504 -246096350 - L1MB3 LINE L1 -28 6155 5740 2480 68 0 7 chr2 4591504 4591813 -246096041 + AluY SINE Alu 1 307 -4 309 51 0 0 chr2 4591815 4591854 -246096000 + (TA)n Simple_repeat Simple_repeat 1 39 0 2929 203 83 36 chr2 4591854 4592137 -246095717 - L1MB3 LINE L1 -443 5740 5398 411 336 61 40 chr2 4593814 4594052 -246093802 + L2 LINE L2 2447 2698 -616 1926 152 146 16 chr2 4594052 4594428 -246093426 + MSTA LTR MaLR 2 426 -2 411 336 61 40 chr2 4594428 4594585 -246093269 + L2 LINE L2 2698 2850 -464 284 323 108 36 chr2 4594579 4594830 -246093024 + L2 LINE L2 3045 3313 0 * 2461 56 10 0 chr2 4595566 4595872 -246091982 - AluY SINE Alu -2 309 1 312 270 0 63 chr2 4596217 4596328 -246091526 - MLT1J2 LTR MaLR -2 448 345 247 353 12 0 chr2 4596714 4596799 -246091055 + MIR3 SINE MIR 92 177 -31 832 244 0 28 chr2 4597169 4597382 -246090472 - MER58A DNA MER1_type -15 209 3 419 86 69 43 chr2 4597527 4597643 -246090211 + CT-rich Low_complexity Low_complexity 2 120 0 1012 155 0 0 chr2 4597651 4597799 -246090055 - AluSg/x SINE Alu -32 280 133 1281 188 68 12 chr2 4597799 4598106 -246089748 - L1MA8 LINE L1 -52 6239 5937 797 205 206 23 chr2 4598202 4598654 -246089200 - MLT1F1 LTR MaLR -6 561 1 1726 177 10 7 chr2 4600267 4600572 -246087282 - AluSx SINE Alu -6 306 1 1585 173 78 0 chr2 4600610 4600893 -246086961 + AluSg SINE Alu 1 305 -5 258 244 213 8 chr2 4601001 4601128 -246086726 + L2 LINE L2 3161 3313 0 331 239 0 80 chr2 4605283 4605371 -246082483 + L2 LINE L2 3224 3304 -9 1598 225 76 57 chr2 4605907 4606428 -246081426 + MLT2B3 LTR ERVL 1 487 -33 3591 178 60 33 chr2 4606653 4607417 -246080437 + LTR1 LTR ERV1 1 785 0 208 330 96 0 chr2 4607531 4607646 -246080208 - L2 LINE L2 0 3313 3188 327 336 57 0 chr2 4607949 4608089 -246079765 - MIR SINE MIR -65 197 50 369 43 0 0 chr2 4610378 4610425 -246077429 + (CA)n Simple_repeat Simple_repeat 2 48 0 605 238 119 61 chr2 4610427 4610788 -246077066 - Charlie4a DNA MER1_type -104 404 23 1177 106 29 114 chr2 4610810 4610973 -246076881 - MER30 DNA MER1_type 0 230 55 1985 155 0 16 chr2 4610973 4611290 -246076564 - AluSx SINE Alu 0 312 1 1177 106 29 114 chr2 4611290 4611351 -246076503 - MER30 DNA MER1_type -175 55 26 2788 121 0 0 chr2 4611351 4611715 -246076139 - THE1B LTR MaLR 0 364 1 1177 106 29 114 chr2 4611715 4611735 -246076119 - MER30 DNA MER1_type -204 26 6 208 289 0 33 chr2 4612027 4612117 -246075737 + (TA)n Simple_repeat Simple_repeat 2 88 0 233 268 101 67 chr2 4612318 4612527 -246075327 + L1ME LINE L1 5652 5867 -254 185 325 62 100 chr2 4614859 4615019 -246072835 + MIR3 SINE MIR 41 194 -14 24 0 0 0 chr2 4615030 4615054 -246072800 + AT_rich Low_complexity Low_complexity 1 24 0 306 351 48 30 chr2 4615251 4615416 -246072438 + L2 LINE L2 2762 2929 -385 232 292 108 46 chr2 4615633 4615805 -246072049 - MER5B DNA MER1_type -11 178 1 28 29 0 0 chr2 4618247 4618282 -246069572 + AT_rich Low_complexity Low_complexity 1 35 0 317 253 114 13 chr2 4619377 4619535 -246068319 - L1ME4a LINE L1 -157 5964 5791 212 256 268 18 chr2 4620309 4620477 -246067377 - MIR SINE MIR -39 223 14 208 237 85 0 chr2 4620808 4620867 -246066987 - L2 LINE L2 -50 3263 3200 2868 117 0 3 chr2 4622059 4622435 -246065419 - THE1C LTR MaLR 0 375 1 381 364 48 36 chr2 4623855 4624185 -246063669 + L1MEd LINE L1 530 863 -5256 524 318 53 26 chr2 4624356 4624885 -246062969 + L1MEd LINE L1 1053 1595 -4715 292 205 33 8 chr2 4624970 4625092 -246062762 + (TA)n Simple_repeat Simple_repeat 2 126 0 28 91 0 0 chr2 4625131 4625208 -246062646 + AT_rich Low_complexity Low_complexity 1 77 0 29 60 0 0 chr2 4625654 4625704 -246062150 + AT_rich Low_complexity Low_complexity 1 50 0 1002 215 27 32 chr2 4626581 4626800 -246061054 - MER20 DNA MER1_type -1 218 1 261 268 98 41 chr2 4627057 4627180 -246060674 + L2 LINE L2 3137 3266 -6 184 288 89 85 chr2 4628426 4628662 -246059192 + L2 LINE L2 3077 3313 0 2091 130 0 16 chr2 4629260 4629576 -246058278 + AluSx SINE Alu 1 311 -1 26 0 0 0 chr2 4630154 4630180 -246057674 + AT_rich Low_complexity Low_complexity 1 26 0 1187 193 121 43 chr2 4630260 4630594 -246057260 - MLT1A1 LTR MaLR -7 421 1 733 205 0 0 chr2 4630756 4630932 -246056922 - FLAM_C SINE Alu 0 176 1 1032 247 18 0 chr2 4631208 4631435 -246056419 - MLT1F1 LTR MaLR -7 560 330 252 212 47 35 chr2 4631555 4631640 -246056214 - MLT1F1 LTR MaLR -481 86 1 2240 91 14 0 chr2 4632274 4632570 -246055284 + AluSp SINE Alu 1 300 -13 387 298 13 33 chr2 4632705 4632856 -246054998 + GA-rich Low_complexity Low_complexity 1 148 0 23 33 0 0 chr2 4634426 4634456 -246053398 + AT_rich Low_complexity Low_complexity 1 30 0 28 29 0 0 chr2 4634480 4634515 -246053339 + AT_rich Low_complexity Low_complexity 1 35 0 21 82 0 0 chr2 4634572 4634621 -246053233 + AT_rich Low_complexity Low_complexity 1 49 0 4060 232 113 40 chr2 4634918 4636202 -246051652 + Charlie1a DNA MER1_type 19 1396 -59 263 308 88 13 chr2 4636216 4636375 -246051479 - L2 LINE L2 -2009 1305 1135 2099 119 0 44 chr2 4637268 4637588 -246050266 - AluSx SINE Alu -6 306 1 21 36 0 0 chr2 4637860 4637888 -246049966 + AT_rich Low_complexity Low_complexity 1 28 0 333 82 0 0 chr2 4638597 4638646 -246049208 + (CA)n Simple_repeat Simple_repeat 2 50 0 216 268 42 38 chr2 4640336 4640421 -246047433 - MIR SINE MIR -68 140 53 2732 32 0 0 chr2 4640729 4641039 -246046815 - AluY SINE Alu 0 311 2 208 164 0 36 chr2 4642626 4642681 -246045173 + CT-rich Low_complexity Low_complexity 4 56 0 310 160 13 13 chr2 4642737 4642812 -246045042 + CT-rich Low_complexity Low_complexity 4 78 0 201 313 9 18 chr2 4643123 4643235 -246044619 + GA-rich Low_complexity Low_complexity 4 114 0 199 195 18 43 chr2 4643654 4643818 -246044036 + (TATAA)n Simple_repeat Simple_repeat 3 162 0 395 348 111 14 chr2 4644371 4644650 -246043204 - L3 LINE CR1 -25 1552 1247 793 164 0 0 chr2 4644651 4644767 -246043087 + FLAM_C SINE Alu 3 118 -15 452 126 11 0 chr2 4645076 4645163 -246042691 + (CA)n Simple_repeat Simple_repeat 1 88 0 249 326 41 10 chr2 4645510 4645608 -246042246 + MIR3 SINE MIR 62 162 -46 186 43 0 0 chr2 4646727 4646750 -246041104 + (GA)n Simple_repeat Simple_repeat 2 24 0 223 225 0 56 chr2 4649218 4649289 -246038565 + (TG)n Simple_repeat Simple_repeat 2 68 0 2483 74 3 10 chr2 4649460 4649769 -246038085 + AluSp SINE Alu 1 307 -6 217 259 46 46 chr2 4650552 4650660 -246037194 + MIR SINE MIR 112 219 -43 6469 96 15 14 chr2 4652286 4653652 -246034202 + L1PA12 LINE L1 4795 6168 0 1928 149 3 3 chr2 4654065 4654360 -246033494 + AluJo SINE Alu 1 295 -17 1942 91 88 0 chr2 4654511 4654785 -246033069 + AluSp SINE Alu 2 299 -14 947 253 83 41 chr2 4654845 4655138 -246032716 - MLT1E2 LTR MaLR -87 539 225 2339 163 49 5 chr2 4655138 4655548 -246032306 + MSTA LTR MaLR 1 428 0 947 253 83 41 chr2 4655548 4655641 -246032213 - MLT1E2 LTR MaLR -401 225 137 316 270 45 27 chr2 4656255 4656366 -246031488 + HAL1b LINE L1 621 733 -615 259 231 88 27 chr2 4656986 4657133 -246030721 + L1MDa LINE L1 2468 2623 -3917 2755 23 0 0 chr2 4657395 4657705 -246030149 + AluYa5 SINE Alu 1 310 -1 415 304 53 6 chr2 4658359 4658530 -246029324 - MIR SINE MIR -72 190 12 1026 262 75 75 chr2 4658533 4659422 -246028432 + MER45C DNA AcHobo 1 943 -10 390 305 0 0 chr2 4659511 4659616 -246028238 - L3 LINE CR1 -272 1305 1201 2295 118 0 0 chr2 4659857 4660170 -246027684 + AluSq SINE Alu 1 313 0 237 278 0 0 chr2 4661945 4662035 -246025819 + (TA)n Simple_repeat Simple_repeat 1 90 0 218 402 0 0 chr2 4662120 4662212 -246025642 - MIR3 SINE MIR -16 192 101 223 346 122 19 chr2 4663025 4663181 -246024673 - MIR SINE MIR -71 191 20 261 83 0 0 chr2 4663290 4663326 -246024528 + (T)n Simple_repeat Simple_repeat 1 36 0 234 62 0 0 chr2 4663810 4663842 -246024012 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 25 75 0 0 chr2 4664021 4664074 -246023780 + AT_rich Low_complexity Low_complexity 1 53 0 506 277 63 51 chr2 4664089 4664342 -246023512 + L2 LINE L2 3056 3311 -2 267 79 0 0 chr2 4664820 4664858 -246022996 + (TG)n Simple_repeat Simple_repeat 2 39 0 817 244 60 69 chr2 4666481 4666804 -246021050 - L2 LINE L2 -359 2913 2581 306 363 65 0 chr2 4667330 4667454 -246020400 - L2 LINE L2 0 3272 3141 1574 88 97 0 chr2 4668351 4668568 -246019286 + L1PA7 LINE L1 5917 6154 0 454 198 12 0 chr2 4669186 4669267 -246018587 - LTR16A1 LTR ERVL -2 455 374 330 311 83 0 chr2 4669452 4669632 -246018222 - LTR16A1 LTR ERVL -116 341 147 593 234 42 42 chr2 4670390 4670582 -246017272 + MLT1J1 LTR MaLR 18 209 -237 294 266 16 40 chr2 4670692 4670816 -246017038 - LTR33 LTR ERVL -2 519 399 670 320 32 41 chr2 4671291 4671632 -246016222 - L3 LINE CR1 -175 1402 1065 817 244 37 5 chr2 4671770 4671987 -246015867 - MER58A DNA MER1_type 0 224 1 412 212 18 44 chr2 4671998 4672111 -246015743 + MER5B DNA MER1_type 4 113 -65 946 224 103 33 chr2 4672114 4672221 -246015633 - L1MDa LINE L1 -6239 301 203 1669 171 23 10 chr2 4672221 4672526 -246015328 + AluJo SINE Alu 1 309 -3 946 224 103 33 chr2 4672526 4672690 -246015164 - L1MDa LINE L1 -6337 203 11 666 218 67 22 chr2 4673037 4673216 -246014638 + MER5A DNA MER1_type 3 189 0 487 301 0 28 chr2 4673268 4673411 -246014443 - MER5B DNA MER1_type -3 175 37 290 181 0 14 chr2 4673549 4673621 -246014233 + (TA)n Simple_repeat Simple_repeat 2 72 0 350 281 0 0 chr2 4673628 4673717 -246014137 - L1MC4 LINE L1 -1339 6703 6615 1791 198 147 2 chr2 4673728 4674143 -246013711 - MLT2B2 LTR ERVL -40 475 1 1298 79 0 6 chr2 4674605 4674783 -246013071 + L1PA5 LINE L1 5978 6154 0 259 329 61 13 chr2 4675243 4675474 -246012380 - HAL1 LINE L1 -2063 444 203 436 68 27 14 chr2 4675751 4675824 -246012030 + (GAAAA)n Simple_repeat Simple_repeat 2 75 0 282 73 0 0 chr2 4676050 4676091 -246011763 + (A)n Simple_repeat Simple_repeat 1 41 0 34 42 0 0 chr2 4676786 4676834 -246011020 + AT_rich Low_complexity Low_complexity 1 48 0 411 282 15 0 chr2 4677656 4677787 -246010067 + MER94 DNA DNA 1 133 -1 2072 137 5 67 chr2 4677898 4678285 -246009569 - THE1B LTR MaLR 0 364 2 409 98 49 16 chr2 4678635 4678758 -246009096 + (TA)n Simple_repeat Simple_repeat 1 127 0 657 64 70 18 chr2 4678772 4678943 -246008911 + (TA)n Simple_repeat Simple_repeat 1 180 0 2688 20 0 0 chr2 4680758 4681060 -246006794 - AluY SINE Alu -9 302 1 24 32 0 0 chr2 4682303 4682334 -246005520 + AT_rich Low_complexity Low_complexity 1 31 0 23 0 0 0 chr2 4682861 4682884 -246004970 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 4686213 4686234 -246001620 + AT_rich Low_complexity Low_complexity 1 21 0 498 221 66 12 chr2 4686970 4687136 -246000718 + MER39 LTR ERV1 1 170 -372 453 206 39 58 chr2 4687117 4687272 -246000582 + MER39 LTR ERV1 357 508 -199 * 2411 72 0 0 chr2 4687315 4687607 -246000247 - AluY SINE Alu -19 292 1 306 194 0 97 chr2 4687636 4687729 -246000125 - AluJ/FLAM SINE Alu -217 85 2 1525 178 6 54 chr2 4687753 4688068 -245999786 - AluJo SINE Alu -12 300 1 257 397 7 14 chr2 4688578 4688724 -245999130 - L3 LINE CR1 -4 1573 1429 2242 188 60 34 chr2 4688727 4689263 -245998591 - MLT2B3 LTR ERVL -1 553 4 1779 159 48 7 chr2 4689278 4689568 -245998286 + AluJb SINE Alu 1 302 -10 5274 188 34 54 chr2 4689569 4690880 -245996974 - ERVL-B3 LTR ERVL -8 5756 4473 2288 170 5 2 chr2 4690856 4691257 -245996597 + ERVL LTR ERVL 4077 4478 -1286 * 1922 250 78 18 chr2 4691257 4691978 -245995876 - MLT-int LTR MaLR -59 1676 864 1381 190 23 50 chr2 4691983 4692325 -245995529 - MSTD LTR MaLR -63 333 1 266 342 102 16 chr2 4692352 4692539 -245995315 - L3 LINE CR1 -208 1369 1167 277 317 58 0 chr2 4693399 4693503 -245994351 + L2 LINE L2 3203 3312 -1 291 54 0 0 chr2 4693587 4693624 -245994230 + (TG)n Simple_repeat Simple_repeat 2 38 0 215 289 64 64 chr2 4695277 4695450 -245992404 - MIR SINE MIR 0 262 90 2297 98 0 10 chr2 4695476 4695783 -245992071 + AluSc SINE Alu 1 304 -5 1797 155 67 28 chr2 4696836 4697197 -245990657 + THE1C LTR MaLR 1 375 0 321 355 61 20 chr2 4697631 4697828 -245990026 + L1MC/D LINE L1 5540 5744 -2064 2642 42 0 0 chr2 4698594 4698905 -245988949 - AluY SINE Alu 0 311 1 521 184 64 0 chr2 4698911 4699020 -245988834 - MLT1A1 LTR MaLR -249 116 1 235 283 17 0 chr2 4699419 4699479 -245988375 - MIR SINE MIR -112 96 36 2496 67 0 0 chr2 4699663 4699962 -245987892 + AluY SINE Alu 1 299 -12 1831 156 54 0 chr2 4699994 4700328 -245987526 - THE1C LTR MaLR 0 375 24 2487 67 0 0 chr2 4700820 4701118 -245986736 + AluY SINE Alu 1 298 -13 2032 150 50 6 chr2 4701150 4701509 -245986345 - THE1C LTR MaLR 0 375 1 2671 38 0 6 chr2 4701799 4702112 -245985742 + AluY SINE Alu 1 311 0 394 298 88 23 chr2 4703310 4703481 -245984373 - L1ME3A LINE L1 -24 6146 5965 548 297 176 11 chr2 4703546 4704108 -245983746 - L1ME3A LINE L1 -211 5951 5297 554 272 92 87 chr2 4704318 4704409 -245983445 - L1ME3A LINE L1 -1310 4836 4747 2222 129 0 0 chr2 4704409 4704719 -245983135 - AluSg SINE Alu 0 310 1 554 272 92 87 chr2 4704719 4706781 -245981073 - L1ME3A LINE L1 -1399 4747 2674 334 223 16 8 chr2 4706797 4706918 -245980936 + CT-rich Low_complexity Low_complexity 3 124 0 494 274 72 33 chr2 4706943 4707333 -245980521 - L1ME3A LINE L1 -3528 2618 2214 348 211 0 0 chr2 4708036 4708112 -245979742 + (TA)n Simple_repeat Simple_repeat 1 76 0 239 79 26 0 chr2 4708111 4708149 -245979705 + (GA)n Simple_repeat Simple_repeat 2 40 0 * 1680 184 0 7 chr2 4708149 4708427 -245979427 - AluSx SINE Alu -30 282 7 28 79 0 0 chr2 4709303 4709366 -245978488 + AT_rich Low_complexity Low_complexity 1 63 0 225 0 0 0 chr2 4709570 4709595 -245978259 + (TG)n Simple_repeat Simple_repeat 1 25 0 1292 180 6 0 chr2 4710990 4711261 -245976593 - MER33 DNA MER1_type -58 266 1 536 282 44 44 chr2 4711839 4712045 -245975809 + MIR SINE MIR 41 246 -16 201 94 0 0 chr2 4712052 4712084 -245975770 + (TAG)n Simple_repeat Simple_repeat 1 32 0 228 143 0 0 chr2 4713080 4713122 -245974732 + (TC)n Simple_repeat Simple_repeat 2 43 0 2429 79 0 0 chr2 4713635 4713938 -245973916 + AluY SINE Alu 1 303 -8 252 169 102 0 chr2 4714115 4714174 -245973680 + MIR SINE MIR 87 151 -111 339 311 101 29 chr2 4714880 4715118 -245972736 + MIR SINE MIR 3 257 -5 554 352 67 15 chr2 4715679 4716082 -245971772 - L2 LINE L2 -444 2870 2447 2383 82 0 13 chr2 4717477 4717792 -245970062 - AluY SINE Alu 0 311 1 261 250 24 12 chr2 4718686 4718770 -245969084 + (TAGA)n Simple_repeat Simple_repeat 4 88 0 843 130 15 21 chr2 4719803 4720140 -245967714 + (TG)n Simple_repeat Simple_repeat 1 334 0 1459 105 0 0 chr2 4720633 4720823 -245967031 + AluSg/x SINE Alu 110 299 -13 412 181 11 53 chr2 4724254 4724348 -245963506 + MLT1J2 LTR MaLR 361 450 0 316 260 27 0 chr2 4724424 4724574 -245963280 + (TA)n Simple_repeat Simple_repeat 2 155 0 300 237 26 0 chr2 4724679 4724852 -245963002 + (TA)n Simple_repeat Simple_repeat 1 177 0 202 429 18 39 chr2 4725380 4725475 -245962379 - L2 LINE L2 -70 3202 3106 1996 195 0 11 chr2 4725475 4725844 -245962010 - MLT1A1 LTR MaLR 0 365 1 202 429 18 39 chr2 4725844 4726028 -245961826 - L2 LINE L2 -166 3106 2929 228 35 0 0 chr2 4726925 4726954 -245960900 + (CA)n Simple_repeat Simple_repeat 2 30 0 496 304 81 20 chr2 4729509 4729824 -245958030 + L1ME LINE L1 5486 5820 -301 229 283 0 0 chr2 4730021 4730074 -245957780 + (CATA)n Simple_repeat Simple_repeat 2 54 0 351 306 99 84 chr2 4730418 4730807 -245957047 + L1ME4a LINE L1 5304 5686 -435 180 77 0 0 chr2 4730807 4730833 -245957021 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1658 180 3 28 chr2 4730836 4731125 -245956729 - AluJo SINE Alu -30 282 1 351 306 99 84 chr2 4731125 4731205 -245956649 + L1ME4a LINE L1 5687 5786 -335 332 276 163 23 chr2 4731243 4731464 -245956390 - MLT1J2 LTR MaLR -3 447 196 355 220 30 30 chr2 4732757 4732857 -245954997 + L1ME4a LINE L1 5955 6054 -67 2128 107 3 3 chr2 4733205 4733494 -245954360 + AluSx SINE Alu 3 291 -21 721 216 42 6 chr2 4733522 4733689 -245954165 + MSTD LTR MaLR 223 395 -1 384 252 172 7 chr2 4734798 4734949 -245952905 + MER117 DNA MER1_type 21 196 -1 2058 137 0 19 chr2 4735189 4735503 -245952351 - AluSx SINE Alu -4 308 1 634 339 29 4 chr2 4736480 4736754 -245951100 - L2 LINE L2 -1318 1996 1716 947 176 0 13 chr2 4739025 4739184 -245948670 + FRAM SINE Alu 1 157 -9 22 80 0 0 chr2 4741425 4741475 -245946379 + AT_rich Low_complexity Low_complexity 1 50 0 22 0 0 0 chr2 4741504 4741526 -245946328 + AT_rich Low_complexity Low_complexity 1 22 0 1088 262 28 6 chr2 4741654 4741971 -245945883 - MER33 DNA MER1_type 0 324 1 325 299 60 22 chr2 4743803 4743937 -245943917 - MIR3 SINE MIR -59 149 11 231 347 51 10 chr2 4744064 4744210 -245943644 - MER5A DNA MER1_type -5 173 24 250 258 0 16 chr2 4744897 4744959 -245942895 - MLT1L LTR MaLR -111 504 444 430 302 58 0 chr2 4744959 4745098 -245942756 + MERVL LTR ERVL 4166 4312 -1173 1384 174 16 172 chr2 4745167 4745610 -245942244 + MLT1A2 LTR MaLR 1 374 0 256 140 0 0 chr2 4746018 4746068 -245941786 + L1MC4 LINE L1 6656 6705 -1337 257 109 22 0 chr2 4746068 4746114 -245941740 + (TA)n Simple_repeat Simple_repeat 2 48 0 2108 128 3 3 chr2 4746316 4746613 -245941241 + AluSx SINE Alu 9 305 -7 292 208 20 40 chr2 4747179 4747280 -245940574 + (TATG)n Simple_repeat Simple_repeat 2 100 0 185 156 0 22 chr2 4747295 4747340 -245940514 + (TG)n Simple_repeat Simple_repeat 1 44 0 210 71 0 0 chr2 4747511 4747539 -245940315 + (GAAA)n Simple_repeat Simple_repeat 2 29 0 363 283 79 12 chr2 4748412 4748584 -245939270 + MIR SINE MIR 31 209 -53 185 308 66 22 chr2 4748725 4748816 -245939038 + MIR SINE MIR 70 164 -98 283 226 39 77 chr2 4749856 4750123 -245937731 + (CCCA)n Simple_repeat Simple_repeat 1 256 0 262 203 0 31 chr2 4750682 4750746 -245937108 + G-rich Low_complexity Low_complexity 4 65 0 27 0 0 0 chr2 4750836 4750863 -245936991 + AT_rich Low_complexity Low_complexity 1 27 0 683 224 12 12 chr2 4751020 4751154 -245936700 - MER5A DNA MER1_type -8 181 45 1594 222 101 9 chr2 4751154 4751582 -245936272 + MLT1C LTR MaLR 1 467 0 683 224 12 12 chr2 4751582 4751617 -245936237 - MER5A DNA MER1_type -143 46 12 1633 160 63 3 chr2 4751740 4752027 -245935827 + MER50 LTR ERV1 3 306 -428 1279 189 44 36 chr2 4752029 4752159 -245935695 + MER50 LTR ERV1 434 562 -172 2059 125 20 17 chr2 4752159 4752456 -245935398 - AluSx SINE Alu -12 300 3 1279 189 44 36 chr2 4752456 4752600 -245935254 + MER50 LTR ERV1 562 710 -24 227 287 0 69 chr2 4753013 4753100 -245934754 - MIR SINE MIR -109 99 19 2405 84 0 7 chr2 4753312 4753621 -245934233 + AluY SINE Alu 1 307 -4 219 204 20 0 chr2 4755630 4755679 -245932175 + (TA)n Simple_repeat Simple_repeat 2 51 0 309 183 54 0 chr2 4755750 4755843 -245932011 + (TA)n Simple_repeat Simple_repeat 2 99 0 197 236 36 36 chr2 4756004 4756059 -245931795 + MIR3 SINE MIR 126 180 -28 324 216 24 32 chr2 4757701 4757826 -245930028 + (TAGA)n Simple_repeat Simple_repeat 3 126 0 222 37 0 0 chr2 4758741 4758768 -245929086 + (TG)n Simple_repeat Simple_repeat 2 28 0 2439 80 3 3 chr2 4759004 4759315 -245928539 + AluY SINE Alu 1 311 0 193 215 89 51 chr2 4759422 4759501 -245928353 + MIR3 SINE MIR 106 187 -21 807 290 140 6 chr2 4759875 4760240 -245927614 + MLT1G1 LTR MaLR 86 499 -96 201 213 0 21 chr2 4760517 4760564 -245927290 + L2 LINE L2 3267 3312 -1 285 94 31 16 chr2 4761556 4761620 -245926234 + (TA)n Simple_repeat Simple_repeat 2 66 0 461 142 239 44 chr2 4761727 4761840 -245926014 + MLT1C LTR MaLR 2 136 -331 8950 182 35 9 chr2 4761841 4763247 -245924607 + L1MA3 LINE L1 21 1390 -6246 612 0 0 0 chr2 4763247 4763315 -245924539 + (GA)n Simple_repeat Simple_repeat 2 69 0 8950 182 35 9 chr2 4763315 4764727 -245923127 + L1MA3 LINE L1 1390 6893 -743 1096 203 8 38 chr2 4764730 4764996 -245922858 - AluJo SINE Alu -23 289 32 4628 119 80 10 chr2 4764996 4765772 -245922082 + L1MA3 LINE L1 6885 7714 -10 2256 99 0 7 chr2 4765804 4766108 -245921746 + AluSg1 SINE Alu 5 306 -3 1098 238 44 24 chr2 4766124 4766464 -245921390 + MLT1C LTR MaLR 121 467 0 348 320 26 48 chr2 4766486 4766717 -245921137 + MIR SINE MIR 13 238 -24 22 56 0 0 chr2 4767729 4767765 -245920089 + AT_rich Low_complexity Low_complexity 1 36 0 208 69 0 0 chr2 4769390 4769419 -245918435 - MIR SINE MIR -66 142 114 186 133 0 0 chr2 4770507 4770537 -245917317 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 21 36 0 0 chr2 4771401 4771429 -245916425 + AT_rich Low_complexity Low_complexity 1 28 0 2106 128 6 13 chr2 4771744 4772056 -245915798 - AluSg SINE Alu 0 310 1 464 264 22 55 chr2 4772418 4772600 -245915254 + MER69A DNA AcHobo 1 176 -1 25 0 0 0 chr2 4772801 4772826 -245915028 + AT_rich Low_complexity Low_complexity 1 25 0 2178 115 0 0 chr2 4773426 4773713 -245914141 - AluSg SINE Alu -23 287 1 1049 72 0 0 chr2 4774049 4774187 -245913667 + MLT2B1 LTR ERVL 1 138 -382 971 199 0 5 chr2 4774200 4774386 -245913468 + MLT2B2 LTR ERVL 329 513 -2 285 252 244 0 chr2 4775243 4775370 -245912484 + MIR SINE MIR 99 256 -6 263 271 14 14 chr2 4775417 4775487 -245912367 - MER5A DNA MER1_type -5 184 115 226 234 0 0 chr2 4775938 4775985 -245911869 + GA-rich Low_complexity Low_complexity 3 49 0 211 259 94 24 chr2 4775993 4776078 -245911776 + MIR SINE MIR 119 209 -53 2840 107 0 3 chr2 4776736 4777101 -245910753 + THE1B LTR MaLR 1 364 0 4240 139 26 2 chr2 4777365 4777983 -245909871 + MER41B LTR ERV1 1 633 -2 235 268 223 27 chr2 4778502 4778614 -245909240 + MER34 LTR ERV1 8 141 -401 * 237 220 121 44 chr2 4778602 4778693 -245909161 + MER34 LTR ERV1 76 173 -369 * 986 211 80 35 chr2 4778682 4778983 -245908871 + MER39 LTR ERV1 391 565 0 26 0 0 0 chr2 4779584 4779610 -245908244 + AT_rich Low_complexity Low_complexity 1 26 0 414 85 0 0 chr2 4780509 4780568 -245907286 + (GGA)n Simple_repeat Simple_repeat 2 60 0 223 221 48 10 chr2 4780986 4781090 -245906764 + (TA)n Simple_repeat Simple_repeat 1 108 0 28 29 0 0 chr2 4783900 4783935 -245903919 + AT_rich Low_complexity Low_complexity 1 35 0 1753 132 0 137 chr2 4784111 4784476 -245903378 + MER1B DNA MER1_type 25 339 0 260 228 55 41 chr2 4784510 4784655 -245903199 + (ATGTG)n Simple_repeat Simple_repeat 2 148 0 208 208 6 82 chr2 4784690 4784873 -245902981 + (TG)n Simple_repeat Simple_repeat 1 169 0 * 321 208 77 30 chr2 4784772 4784940 -245902914 + (TAGTG)n Simple_repeat Simple_repeat 5 180 0 307 238 71 18 chr2 4784966 4785134 -245902720 + (TAGTG)n Simple_repeat Simple_repeat 2 178 0 203 293 81 50 chr2 4786111 4786210 -245901644 - MIR SINE MIR -70 192 91 2294 103 3 0 chr2 4787426 4787726 -245900128 - AluSp SINE Alu -12 301 1 347 238 266 21 chr2 4787952 4788095 -245899759 - MLT1J LTR MaLR -333 178 1 5321 306 76 33 chr2 4789023 4789499 -245898355 - L2 LINE L2 -623 2691 2237 2121 106 7 0 chr2 4789499 4789781 -245898073 - AluSc SINE Alu -25 284 1 5321 306 76 33 chr2 4789781 4790738 -245897116 - L2 LINE L2 -1077 2237 1323 1420 205 13 30 chr2 4790738 4791036 -245896818 - AluJb SINE Alu -19 293 1 5321 306 76 33 chr2 4791036 4792020 -245895834 - L2 LINE L2 -1991 1323 159 2283 114 0 0 chr2 4792020 4792319 -245895535 - AluSg SINE Alu -11 299 1 5321 306 76 33 chr2 4792319 4792393 -245895461 - L2 LINE L2 -3155 159 90 33 0 0 0 chr2 4792506 4792539 -245895315 + AT_rich Low_complexity Low_complexity 1 33 0 2485 74 0 3 chr2 4792539 4792851 -245895003 - AluY SINE Alu 0 311 1 2286 121 0 3 chr2 4793117 4793431 -245894423 + AluSq SINE Alu 1 313 0 445 347 55 24 chr2 4793434 4793814 -245894040 + L1M4 LINE L1 3115 3499 -2647 668 308 242 8 chr2 4793858 4794135 -245893719 - L2 LINE L2 -561 2753 2542 2228 191 46 20 chr2 4794135 4794590 -245893264 - MLT1C LTR MaLR 0 467 1 668 308 242 8 chr2 4794590 4794832 -245893022 - L2 LINE L2 -772 2542 2112 293 381 7 0 chr2 4795128 4795267 -245892587 + L2 LINE L2 3133 3272 0 224 29 86 0 chr2 4795931 4795966 -245891888 + T-rich Low_complexity Low_complexity 4 41 0 2297 106 0 0 chr2 4796636 4796929 -245890925 + AluSx SINE Alu 5 297 -15 257 209 11 22 chr2 4796931 4797022 -245890832 + (TA)n Simple_repeat Simple_repeat 1 90 0 1973 137 0 0 chr2 4798055 4798332 -245889522 + AluSx SINE Alu 1 277 -35 220 26 26 26 chr2 4798336 4798374 -245889480 + (CAAAA)n Simple_repeat Simple_repeat 1 38 0 21 0 0 0 chr2 4800586 4800607 -245887247 + AT_rich Low_complexity Low_complexity 1 21 0 1851 152 10 3 chr2 4800607 4800896 -245886958 - AluSx SINE Alu -20 292 2 2156 108 3 13 chr2 4801363 4801670 -245886184 - AluY SINE Alu -7 304 1 603 236 99 6 chr2 4805302 4805484 -245882370 - MER3 DNA MER1_type -1 208 10 1861 137 4 0 chr2 4805775 4806045 -245881809 + AluSx SINE Alu 22 292 -20 203 333 0 0 chr2 4806079 4806139 -245881715 - L2 LINE L2 -16 3256 3197 469 228 123 49 chr2 4806148 4806310 -245881544 - MIR SINE MIR -19 243 70 1914 110 10 61 chr2 4806727 4807037 -245880817 - AluSx SINE Alu -13 299 6 278 0 0 51 chr2 4807037 4807076 -245880778 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1222 207 73 25 chr2 4807078 4807353 -245880501 - AluJb SINE Alu -24 288 1 1274 103 65 73 chr2 4807730 4807962 -245879892 + MER30 DNA MER1_type 1 230 0 2095 104 7 0 chr2 4808162 4808449 -245879405 - AluSx SINE Alu -23 289 1 207 339 28 0 chr2 4809518 4809627 -245878227 - MIR SINE MIR -56 206 95 1366 105 5 20 chr2 4809679 4809879 -245877975 + L1PA15 LINE L1 5962 6158 -7 409 136 0 0 chr2 4810812 4810878 -245876976 - Alu SINE Alu -5 306 241 3597 215 46 48 chr2 4811020 4812221 -245875633 + L1MD1 LINE L1 1147 2345 -4195 246 284 0 21 chr2 4812315 4812410 -245875444 + L1MD1 LINE L1 5493 5585 -955 849 110 0 0 chr2 4812412 4812539 -245875315 + (TTTC)n Simple_repeat Simple_repeat 2 128 0 2020 164 0 0 chr2 4812545 4812856 -245874998 - AluSx SINE Alu -1 311 1 1822 195 88 17 chr2 4812870 4813516 -245874338 + L1MD1 LINE L1 5592 6333 -303 208 318 25 117 chr2 4813532 4813771 -245874083 + MIR SINE MIR 11 227 -35 214 338 105 48 chr2 4813797 4814380 -245873474 + L2 LINE L2 2362 2977 -337 339 25 0 0 chr2 4814780 4814820 -245873034 + (CA)n Simple_repeat Simple_repeat 2 41 0 2038 137 3 10 chr2 4814862 4815161 -245872693 - AluSx SINE Alu -15 297 1 634 263 0 0 chr2 4815339 4815491 -245872363 - L1MA10 LINE L1 -2 6332 6181 3862 176 45 32 chr2 4815508 4816203 -245871651 - MER44D DNA MER2_type 0 705 2 526 211 9 0 chr2 4816230 4816339 -245871515 - L1MB1 LINE L1 -9 6159 6050 25 0 0 0 chr2 4816372 4816397 -245871457 + AT_rich Low_complexity Low_complexity 1 25 0 243 348 121 9 chr2 4816748 4816876 -245870978 - MIR SINE MIR -61 147 13 1210 138 0 21 chr2 4817046 4817234 -245870620 - AluSx SINE Alu -128 184 1 309 327 159 22 chr2 4817238 4817608 -245870246 + L2 LINE L2 1989 2409 -905 183 42 0 0 chr2 4818381 4818405 -245869449 + (CATTC)n Simple_repeat Simple_repeat 1 24 0 249 311 0 0 chr2 4820215 4820289 -245867565 + tRNA-Ile-ATT tRNA tRNA 1 74 -3 182 247 260 0 chr2 4821120 4821193 -245866661 - MIR SINE MIR -51 211 120 23 0 0 0 chr2 4821444 4821467 -245866387 + AT_rich Low_complexity Low_complexity 1 23 0 203 122 24 24 chr2 4822237 4822278 -245865576 + A-rich Low_complexity Low_complexity 4 44 0 308 346 103 14 chr2 4822475 4822689 -245865165 + MIR SINE MIR 3 235 -27 780 187 45 90 chr2 4822708 4822976 -245864878 + MLT1A1 LTR MaLR 110 365 0 669 221 0 7 chr2 4823095 4823235 -245864619 + L1PB4 LINE L1 6018 6156 0 193 274 154 34 chr2 4823394 4823511 -245864343 + MIR3 SINE MIR 10 140 -68 575 225 62 0 chr2 4823702 4823831 -245864023 + MLT1A2 LTR MaLR 4 140 -234 2054 131 64 33 chr2 4823831 4824191 -245863663 + THE1C LTR MaLR 1 371 -4 9921 143 24 36 chr2 4824195 4825793 -245862061 + THE1C-int LTR MaLR 3 1580 0 1649 191 55 12 chr2 4825793 4826138 -245861716 + THE1C LTR MaLR 1 360 -15 810 222 54 42 chr2 4826150 4826389 -245861465 + MLT1A2 LTR MaLR 133 374 0 189 171 0 0 chr2 4827353 4827388 -245860466 + (TA)n Simple_repeat Simple_repeat 2 36 0 225 273 23 0 chr2 4827390 4827478 -245860376 - L1MC4 LINE L1 -1339 6703 6614 232 254 0 17 chr2 4827478 4827537 -245860317 + (TATG)n Simple_repeat Simple_repeat 2 59 0 243 270 0 0 chr2 4827537 4827626 -245860228 + L1MC4 LINE L1 6614 6702 -1340 231 277 153 7 chr2 4827716 4827853 -245860001 - MER103 DNA DNA -8 158 2 306 319 111 21 chr2 4827996 4828140 -245859714 - MER5A DNA MER1_type -31 158 2 211 327 29 39 chr2 4828955 4829059 -245858795 - MIR3 SINE MIR -35 173 71 352 285 69 14 chr2 4830687 4830831 -245857023 - MER5A DNA MER1_type -11 178 27 480 152 36 27 chr2 4830968 4831080 -245856774 - L1MB4 LINE L1 -1 6179 6067 2154 104 30 0 chr2 4831132 4831430 -245856424 - AluSg1 SINE Alu -2 307 1 2411 211 20 10 chr2 4831430 4831933 -245855921 - L1MB4 LINE L1 -106 6074 5567 299 318 8 8 chr2 4832561 4832693 -245855161 + (TGG)n Simple_repeat Simple_repeat 3 134 0 263 226 78 35 chr2 4833204 4833319 -245854535 + Charlie8 DNA MER1_type 73 192 -2225 372 315 6 22 chr2 4833737 4833918 -245853936 + (CACCAT)n Simple_repeat Simple_repeat 1 178 0 * 442 307 11 6 chr2 4833796 4833975 -245853879 + (CCA)n Simple_repeat Simple_repeat 1 180 0 268 346 13 0 chr2 4833937 4834093 -245853761 + (CACCAT)n Simple_repeat Simple_repeat 1 158 0 * 223 250 56 28 chr2 4834695 4834767 -245853087 + L2 LINE L2 3147 3220 -52 2494 59 0 0 chr2 4835682 4835985 -245851869 - AluY SINE Alu -8 303 1 211 189 0 0 chr2 4837387 4837424 -245850430 + (TG)n Simple_repeat Simple_repeat 2 38 0 2241 104 16 0 chr2 4837462 4837769 -245850085 - AluSq SINE Alu -1 312 1 2153 139 47 36 chr2 4838393 4838753 -245849101 - THE1B LTR MaLR 0 364 1 11988 106 13 8 chr2 4838753 4840325 -245847529 - THE1B-int LTR MaLR 0 1580 1 2207 126 47 49 chr2 4840325 4840690 -245847164 - THE1B LTR MaLR 0 364 1 212 253 13 0 chr2 4842300 4842375 -245845479 + (TA)n Simple_repeat Simple_repeat 1 76 0 2218 118 7 10 chr2 4842394 4842698 -245845156 - AluSx SINE Alu -9 303 1 22 0 0 0 chr2 4842949 4842971 -245844883 + AT_rich Low_complexity Low_complexity 1 22 0 403 171 19 0 chr2 4843763 4843868 -245843986 + (TG)n Simple_repeat Simple_repeat 2 108 0 218 205 53 41 chr2 4843923 4844094 -245843760 + (TG)n Simple_repeat Simple_repeat 1 173 0 289 117 33 0 chr2 4844138 4844198 -245843656 + (TG)n Simple_repeat Simple_repeat 2 63 0 309 266 182 13 chr2 4844781 4844935 -245842919 + L1ME3A LINE L1 5986 6165 -5 339 285 128 75 chr2 4845000 4845281 -245842573 + L1MB2 LINE L1 969 1264 -5585 180 341 71 0 chr2 4846005 4846090 -245841764 + L2 LINE L2 2710 2800 -514 228 214 0 0 chr2 4846104 4846160 -245841694 + (ATG)n Simple_repeat Simple_repeat 1 56 0 1915 158 0 0 chr2 4846215 4846506 -245841348 + AluSx SINE Alu 21 311 -1 357 223 204 32 chr2 4846510 4846667 -245841187 - MIR SINE MIR -63 199 16 202 304 152 27 chr2 4847068 4847180 -245840674 + L2 LINE L2 3187 3312 -1 2143 106 3 0 chr2 4850797 4851090 -245836764 + AluY SINE Alu 2 295 -16 760 245 70 84 chr2 4852288 4852697 -245835157 + MLT1I LTR MaLR 8 450 0 1814 138 7 24 chr2 4853888 4854225 -245833629 + AluSx SINE Alu 1 332 0 384 304 57 6 chr2 4854334 4854492 -245833362 - MIR SINE MIR -73 189 24 2199 104 0 36 chr2 4854672 4854980 -245832874 - AluSg SINE Alu -13 297 1 1427 237 113 7 chr2 4855021 4855456 -245832398 - L1ME2 LINE L1 -77 6087 5607 246 239 70 0 chr2 4855753 4855824 -245832030 - L1ME2 LINE L1 -673 5491 5416 1680 243 79 58 chr2 4855903 4856160 -245831694 - L1ME2 LINE L1 -742 5442 5192 2003 111 37 17 chr2 4856160 4856458 -245831396 - AluSx SINE Alu -8 304 1 1680 243 79 58 chr2 4856458 4857282 -245830572 - L1ME2 LINE L1 -992 5192 4321 11128 226 50 14 chr2 4857282 4857804 -245830050 + L1MB2 LINE L1 2557 3059 -3814 2204 120 0 0 chr2 4857804 4858103 -245829751 + AluSq SINE Alu 1 299 -14 11128 226 50 14 chr2 4858103 4860389 -245827465 + L1MB2 LINE L1 3059 5571 -1302 195 100 0 0 chr2 4860389 4860419 -245827435 + (CAGA)n Simple_repeat Simple_repeat 4 33 0 11128 226 50 14 chr2 4860419 4861500 -245826354 + L1MB2 LINE L1 5571 6612 -261 2536 254 80 38 chr2 4861503 4862114 -245825740 - L1ME2 LINE L1 -2413 3733 3149 181 0 33 33 chr2 4862114 4862144 -245825710 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2536 254 80 38 chr2 4862144 4862813 -245825041 - L1ME2 LINE L1 -2997 3149 2399 21 57 0 0 chr2 4863218 4863253 -245824601 + AT_rich Low_complexity Low_complexity 1 35 0 326 307 145 22 chr2 4863511 4863690 -245824164 + MIR3 SINE MIR 8 208 0 284 303 25 0 chr2 4863922 4864041 -245823813 - L1ME LINE L1 -304 5817 5696 2499 71 0 3 chr2 4864509 4864817 -245823037 + AluY SINE Alu 1 307 -4 502 275 67 42 chr2 4865358 4865598 -245822256 + MIR SINE MIR 4 249 -13 3480 187 108 28 chr2 4866175 4867300 -245820554 + L1MB7 LINE L1 4883 6103 -81 933 271 13 4 chr2 4867582 4867807 -245820047 + Charlie1 DNA MER1_type 1 227 -2534 636 234 0 0 chr2 4867801 4867942 -245819912 + Charlie1 DNA MER1_type 2620 2760 -1 * 198 300 0 71 chr2 4868165 4868235 -245819619 - L2 LINE L2 -55 3217 3153 187 372 44 22 chr2 4868446 4868583 -245819271 + L2 LINE L2 3132 3271 -1 462 153 0 90 chr2 4871251 4871362 -245816492 - MER53 DNA DNA 0 189 89 393 276 17 26 chr2 4872254 4872370 -245815484 + MIR SINE MIR 33 147 -61 21 57 0 0 chr2 4873777 4873812 -245814042 + AT_rich Low_complexity Low_complexity 1 35 0 258 105 0 0 chr2 4874821 4874859 -245812995 + (CA)n Simple_repeat Simple_repeat 1 38 0 243 0 0 0 chr2 4875702 4875729 -245812125 + (TG)n Simple_repeat Simple_repeat 1 27 0 245 281 37 49 chr2 4876924 4877006 -245810848 - MLT1K LTR MaLR -356 232 152 318 296 134 23 chr2 4877776 4877948 -245809906 - MIR SINE MIR -43 219 29 247 250 94 42 chr2 4878771 4878867 -245808987 - MIR SINE MIR -114 148 48 909 286 129 11 chr2 4878916 4879287 -245808567 + LTR16C LTR ERVL 69 483 -8 255 282 13 0 chr2 4879709 4879787 -245808067 - MER116 DNA Mariner 0 80 2 386 302 41 24 chr2 4879903 4880072 -245807782 + MIR SINE MIR 76 247 -15 195 356 82 22 chr2 4880557 4880592 -245807262 + MIR SINE MIR 49 80 -182 7009 152 43 13 chr2 4880592 4880840 -245807014 - Tigger3b DNA MER2_type -1797 1231 992 2031 134 0 0 chr2 4880840 4881297 -245806557 + AluSq SINE Alu 1 457 0 7009 152 43 13 chr2 4881297 4882243 -245805611 - Tigger3b DNA MER2_type -2036 992 1 195 356 82 22 chr2 4882243 4882342 -245805512 + MIR SINE MIR 80 191 -71 285 371 68 34 chr2 4882777 4883098 -245804756 + L2 LINE L2 2311 2642 -672 417 326 27 27 chr2 4883099 4883286 -245804568 - LTR16C LTR ERVL 0 491 305 1936 189 47 14 chr2 4883525 4883885 -245803969 - MSTD LTR MaLR 0 396 25 600 128 262 28 chr2 4884235 4884376 -245803478 - MER3 DNA MER1_type -6 203 30 479 279 38 25 chr2 4884422 4884580 -245803274 + MLT1H LTR MaLR 10 169 -380 485 274 0 16 chr2 4885493 4885617 -245802237 - MSTD LTR MaLR -78 318 197 217 239 0 0 chr2 4885691 4885737 -245802117 + MIR SINE MIR 89 134 -128 308 43 0 43 chr2 4886449 4886496 -245801358 + (TAA)n Simple_repeat Simple_repeat 2 46 0 429 293 99 42 chr2 4886912 4887103 -245800751 + MIR3 SINE MIR 1 202 -6 382 281 44 0 chr2 4887499 4887634 -245800220 - MIR3 SINE MIR -1 207 67 238 279 0 47 chr2 4888067 4888153 -245799701 + GA-rich Low_complexity Low_complexity 5 86 0 2384 64 0 0 chr2 4889239 4889581 -245798273 + AluY SINE Alu 1 342 0 256 272 87 11 chr2 4889724 4889816 -245798038 + MIR SINE MIR 91 189 -73 23 0 0 0 chr2 4890925 4890948 -245796906 + AT_rich Low_complexity Low_complexity 1 23 0 371 330 44 53 chr2 4891052 4891394 -245796460 - L2 LINE L2 -801 2513 2175 1337 219 34 70 chr2 4891512 4891811 -245796043 - MLT1A2 LTR MaLR 0 374 91 2123 182 79 89 chr2 4891811 4892371 -245795483 - MLT2B3 LTR ERVL 0 554 1 1337 219 34 70 chr2 4892371 4892459 -245795395 - MLT1A2 LTR MaLR -283 91 1 1699 219 102 2 chr2 4892965 4893385 -245794469 + MLT1C LTR MaLR 1 462 -5 1553 212 0 7 chr2 4893916 4894208 -245793646 - AluJb SINE Alu -22 290 1 531 218 69 75 chr2 4894386 4894429 -245793425 - MIR SINE MIR -8 254 212 264 77 0 0 chr2 4894429 4894468 -245793386 + (CA)n Simple_repeat Simple_repeat 2 40 0 531 218 69 75 chr2 4894468 4894526 -245793328 - MIR SINE MIR -50 212 155 2849 109 3 3 chr2 4894526 4894901 -245792953 + THE1C LTR MaLR 1 375 0 531 218 69 75 chr2 4894901 4894986 -245792868 - MIR SINE MIR -107 155 68 214 319 90 54 chr2 4895045 4895211 -245792643 - L2 LINE L2 -919 2395 2224 635 318 60 22 chr2 4895438 4896275 -245791579 + L1ME3 LINE L1 5036 5932 -230 2198 213 33 27 chr2 4896675 4896712 -245791142 - MLT2B1 LTR ERVL 0 520 485 243 0 0 0 chr2 4896712 4896739 -245791115 + (TG)n Simple_repeat Simple_repeat 2 28 0 2198 213 33 27 chr2 4896739 4897218 -245790636 - MLT2B1 LTR ERVL -35 485 1 356 290 0 0 chr2 4897702 4897802 -245790052 - MER91B DNA MER1_type -40 150 51 27 0 0 0 chr2 4899718 4899745 -245788109 + AT_rich Low_complexity Low_complexity 1 27 0 761 243 0 7 chr2 4900131 4900279 -245787575 + FRAM SINE Alu 4 150 -26 2407 82 0 13 chr2 4900281 4900585 -245787269 - AluSc SINE Alu -9 300 1 39 38 0 0 chr2 4900585 4900638 -245787216 + AT_rich Low_complexity Low_complexity 1 53 0 458 277 3 2 chr2 4902049 4902172 -245785682 - MLT1E2 LTR MaLR -202 424 262 894 289 53 73 chr2 4902221 4902594 -245785260 + HAL1 LINE L1 1054 1406 -1101 2277 111 0 16 chr2 4902594 4902909 -245784945 + AluSg SINE Alu 1 310 0 894 289 53 73 chr2 4902909 4903301 -245784553 + HAL1 LINE L1 1406 1804 -703 480 151 2 8 chr2 4904128 4904216 -245783638 + L1PB1 LINE L1 5698 5782 -369 419 147 39 0 chr2 4904235 4904337 -245783517 + (TA)n Simple_repeat Simple_repeat 1 106 0 2981 65 3 13 chr2 4904337 4904709 -245783145 + L1PB1 LINE L1 5782 6149 -2 2097 116 0 3 chr2 4905083 4905401 -245782453 - AluSq SINE Alu 0 317 1 2330 70 3 7 chr2 4905659 4905958 -245781896 + AluY SINE Alu 1 298 -13 2179 128 3 0 chr2 4956082 4956386 -245731468 + AluSx SINE Alu 1 305 -7 403 349 17 6 chr2 4956528 4956700 -245731154 + L2 LINE L2 2606 2779 -535 1932 135 0 0 chr2 4956757 4957024 -245730830 - AluSx SINE Alu -45 267 1 185 349 0 12 chr2 4958095 4958178 -245729676 - MIR SINE MIR -44 218 137 287 279 146 24 chr2 4958302 4958467 -245729387 + L1ME LINE L1 5420 5604 -560 2011 133 13 3 chr2 4958979 4959280 -245728574 - AluSp SINE Alu -5 308 5 995 209 33 113 chr2 4959564 4959961 -245727893 - MLT1A1 LTR MaLR 0 365 1 220 298 0 0 chr2 4959980 4960037 -245727817 - L3 LINE CR1 -1 1576 1520 289 330 30 88 chr2 4960166 4960463 -245727391 - L2 LINE L2 0 3272 2993 401 294 44 7 chr2 4960674 4960810 -245727044 + MIR3 SINE MIR 6 146 -62 412 264 65 75 chr2 4961490 4961691 -245726163 - MIR SINE MIR -34 228 30 360 43 0 0 chr2 4962330 4962376 -245725478 + (CA)n Simple_repeat Simple_repeat 1 46 0 354 287 25 0 chr2 4962407 4962529 -245725325 + MER112 DNA MER1_type 136 260 0 260 146 39 59 chr2 4962763 4963157 -245724697 + (TA)n Simple_repeat Simple_repeat 1 386 0 440 293 67 34 chr2 4963247 4963455 -245724399 + L2 LINE L2 3099 3313 0 184 50 100 0 chr2 4964601 4964641 -245723213 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 347 226 89 24 chr2 4965363 4965531 -245722323 - Looper DNA T2_type -10 1548 1370 * 557 264 6 0 chr2 4965524 4965687 -245722167 - Looper DNA T2_type -598 960 797 521 255 50 0 chr2 4965759 4965920 -245721934 - MER3 DNA MER1_type -20 189 21 550 195 8 0 chr2 4965930 4966048 -245721806 - L1MB1 LINE L1 -340 5828 5710 1762 138 138 9 chr2 4966089 4966438 -245721416 + MSTA LTR MaLR 2 395 -33 1929 161 0 25 chr2 4966440 4966756 -245721098 - AluJo SINE Alu -4 308 1 556 143 10 0 chr2 4966773 4966871 -245720983 - L1MA7 LINE L1 -304 5987 5889 855 299 92 9 chr2 4966880 4967208 -245720646 + LTR40a LTR ERVL 164 518 -1 1499 214 70 34 chr2 4967218 4967717 -245720137 - Looper DNA T2_type -989 569 53 1031 228 14 0 chr2 4968550 4968761 -245719093 - MER58A DNA MER1_type -9 215 2 2403 201 8 10 chr2 4969976 4970499 -245717355 - L1MB7 LINE L1 0 6184 5663 266 286 162 12 chr2 4970739 4970885 -245716969 + MIR SINE MIR 12 176 -86 479 222 43 43 chr2 4971412 4971574 -245716280 - MER20 DNA MER1_type -53 166 5 1264 291 106 39 chr2 4971588 4972614 -245715240 - L1MEc LINE L1 -4342 2054 921 3680 105 2 0 chr2 4972614 4973127 -245714727 - MER75 DNA T2_type 0 514 1 1264 291 106 39 chr2 4973127 4973404 -245714450 - L1MEc LINE L1 -5475 921 664 201 337 20 31 chr2 4973459 4973557 -245714297 - MER5B DNA MER1_type -77 101 5 1906 150 7 7 chr2 4973622 4973916 -245713938 + AluSx SINE Alu 1 294 -18 226 204 0 0 chr2 4974312 4974356 -245713498 - MER58 DNA MER1_type 0 2420 2377 326 297 64 18 chr2 4974356 4974575 -245713279 - L1MEc LINE L1 -6117 279 51 2003 167 6 6 chr2 4975375 4975711 -245712143 - MER1B DNA MER1_type -1 336 1 210 327 139 0 chr2 4975766 4975867 -245711987 - L2 LINE L2 -8 3264 3150 273 282 13 0 chr2 4976290 4976368 -245711486 + L2 LINE L2 3193 3271 -1 210 71 0 0 chr2 4977005 4977033 -245710821 + (T)n Simple_repeat Simple_repeat 1 28 0 695 255 145 33 chr2 4977808 4978263 -245709591 - HAL1 LINE L1 -125 2382 1877 578 240 125 72 chr2 4978316 4978620 -245709234 - HAL1 LINE L1 -714 1793 1474 1417 241 27 22 chr2 4979829 4980198 -245707656 + MLT1A2 LTR MaLR 1 371 -3 198 0 0 0 chr2 4981542 4981564 -245706290 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 996 233 72 43 chr2 4982261 4982609 -245705245 - MLT1C LTR MaLR -104 363 6 2337 104 0 7 chr2 4982663 4982972 -245704882 + AluSq SINE Alu 1 307 -6 871 270 131 18 chr2 4984019 4984522 -245703332 + L1ME4a LINE L1 5557 6116 -5 1864 151 0 7 chr2 4985173 4985458 -245702396 + AluSx SINE Alu 21 303 -9 22 35 0 0 chr2 4985523 4985552 -245702302 + AT_rich Low_complexity Low_complexity 1 29 0 1565 109 60 0 chr2 4985901 4986168 -245701686 + AluSc SINE Alu 1 283 -26 306 381 23 11 chr2 4987828 4988004 -245699850 + MIR3 SINE MIR 12 189 -19 275 271 42 25 chr2 4989624 4989742 -245698112 + MIR SINE MIR 96 215 -47 780 243 132 70 chr2 4990649 4991036 -245696818 - MLT2D LTR ERVL -2 412 2 1630 179 0 25 chr2 4991081 4991366 -245696488 + AluJo SINE Alu 35 312 0 447 297 92 41 chr2 4991815 4991957 -245695897 - MIR SINE MIR -23 239 83 2150 160 78 10 chr2 4991957 4992357 -245695497 - MSTA LTR MaLR 0 428 2 447 297 92 41 chr2 4992357 4992409 -245695445 - MIR SINE MIR -179 83 35 285 314 121 24 chr2 4992794 4993001 -245694853 + MLT1K LTR MaLR 326 552 -36 205 148 19 19 chr2 4993539 4993593 -245694261 + (CATATA)n Simple_repeat Simple_repeat 6 59 0 255 40 40 20 chr2 4994269 4994319 -245693535 + (TA)n Simple_repeat Simple_repeat 2 52 0 1603 160 8 8 chr2 4995115 4995378 -245692476 + AluSx SINE Alu 48 310 -2 278 93 56 37 chr2 4995965 4996073 -245691781 + (TA)n Simple_repeat Simple_repeat 2 111 0 2162 148 0 0 chr2 4996734 4997039 -245690815 - AluSx SINE Alu -7 305 1 1833 133 35 0 chr2 4997232 4997538 -245690316 - AluSx SINE Alu 0 333 19 442 320 131 10 chr2 4998315 4998712 -245689142 - L2 LINE L2 -17 3296 2852 207 369 46 31 chr2 4998957 4999087 -245688767 - L2 LINE L2 0 3272 3141 2127 185 49 21 chr2 4999357 4999785 -245688069 + MLT1C LTR MaLR 28 467 0 283 314 163 33 chr2 5000851 5001182 -245686672 - MLT1I LTR MaLR -35 374 1 2288 108 3 3 chr2 5001239 5001546 -245686308 + AluSp SINE Alu 1 307 -6 193 313 50 0 chr2 5002496 5002576 -245685278 + MIR SINE MIR 46 129 -133 370 240 164 27 chr2 5002785 5002931 -245684923 + L1MC5 LINE L1 7746 7911 -50 235 330 139 0 chr2 5003428 5003543 -245684311 - MIR3 SINE MIR -63 145 15 285 316 0 21 chr2 5004100 5004195 -245683659 + L2 LINE L2 3175 3267 -5 279 161 0 0 chr2 5004351 5004407 -245683447 + (TG)n Simple_repeat Simple_repeat 1 56 0 609 263 60 23 chr2 5004517 5004734 -245683120 + MIR SINE MIR 13 237 -25 1592 157 39 14 chr2 5004822 5005102 -245682752 - AluJb SINE Alu -25 287 1 250 311 41 8 chr2 5006493 5006615 -245681239 - L1ME4a LINE L1 -6 6115 5990 1071 93 17 29 chr2 5006682 5006854 -245681000 - L1PA13 LINE L1 -1 6162 5993 786 256 40 4 chr2 5006892 5007119 -245680735 - MIR SINE MIR -21 241 7 23 33 0 0 chr2 5007523 5007553 -245680301 + AT_rich Low_complexity Low_complexity 1 30 0 279 287 172 0 chr2 5007658 5007780 -245680074 - L1MC4 LINE L1 -375 7667 7525 251 204 37 0 chr2 5008616 5008670 -245679184 - MIR SINE MIR -192 70 15 821 173 84 35 chr2 5010617 5010843 -245677011 + L1MB7 LINE L1 5947 6183 -1 2114 119 3 22 chr2 5010982 5011301 -245676553 - AluSp SINE Alu 0 313 1 7102 53 6 11 chr2 5012339 5013769 -245674085 + L1PA7 LINE L1 4727 6151 -3 2002 208 57 5 chr2 5013782 5014224 -245673630 + MLT1C LTR MaLR 3 467 0 244 48 48 0 chr2 5015433 5015475 -245672379 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 288 53 0 0 chr2 5015826 5015864 -245671990 + (TG)n Simple_repeat Simple_repeat 2 39 0 2020 140 10 13 chr2 5018132 5018439 -245669415 - AluSx SINE Alu -6 306 1 379 259 54 22 chr2 5020602 5020787 -245667067 + LTR16B LTR ERVL 187 377 -87 201 178 0 0 chr2 5023066 5023111 -245664743 - MER5A DNA MER1_type -22 167 123 1000 36 15 15 chr2 5023394 5023531 -245664323 + (GAAA)n Simple_repeat Simple_repeat 2 138 0 2849 13 0 0 chr2 5024244 5024552 -245663302 - AluYa5 SINE Alu -3 308 1 208 199 122 5 chr2 5025013 5025081 -245662773 + MIR SINE MIR 49 123 -85 2185 289 77 36 chr2 5026614 5027817 -245660037 + L2 LINE L2 1157 2408 -906 431 324 78 15 chr2 5028275 5028735 -245659119 + L2 LINE L2 2820 3308 -5 360 349 94 5 chr2 5029726 5029918 -245657936 + MIR SINE MIR 2 210 -52 241 301 211 36 chr2 5030098 5030377 -245657477 - L2 LINE L2 0 3272 2945 1936 178 108 11 chr2 5030428 5030861 -245656993 - L1MB3 LINE L1 -1 6182 5708 515 286 19 7 chr2 5030870 5031024 -245656830 + L2 LINE L2 3153 3308 -5 257 300 42 50 chr2 5031042 5031162 -245656692 - MIR SINE MIR -73 189 71 226 298 7 80 chr2 5031206 5031357 -245656497 + MIR SINE MIR 15 154 -108 213 289 24 12 chr2 5031558 5031641 -245656213 + MIR SINE MIR 62 145 -63 4447 152 26 1 chr2 5032359 5033076 -245654778 - L1PB4 LINE L1 -8 6148 5414 426 293 112 21 chr2 5034542 5034730 -245653124 - MIR SINE MIR -30 232 28 205 250 0 0 chr2 5034837 5034881 -245652973 - L2 LINE L2 -556 2758 2715 221 186 17 68 chr2 5035563 5035622 -245652232 - L2 LINE L2 -14 3258 3203 296 286 105 9 chr2 5035740 5035845 -245652009 + MIR SINE MIR 34 148 -114 210 284 82 75 chr2 5037682 5037816 -245650038 + MIR SINE MIR 48 182 -80 555 281 44 78 chr2 5037877 5038025 -245649829 - L2 LINE L2 -4 3309 3157 2078 115 14 0 chr2 5038025 5038311 -245649543 - AluSq SINE Alu -18 295 6 555 281 44 78 chr2 5038311 5038482 -245649372 - L2 LINE L2 -156 3157 3001 327 263 182 0 chr2 5039976 5040075 -245647779 + L2 LINE L2 3142 3258 -14 21 36 0 0 chr2 5040559 5040587 -245647267 + AT_rich Low_complexity Low_complexity 1 28 0 383 293 84 22 chr2 5040682 5040843 -245647011 + MIR3 SINE MIR 20 193 -15 1741 172 10 3 chr2 5041505 5041808 -245646046 - AluJb SINE Alu -5 307 3 2751 23 3 0 chr2 5041936 5042245 -245645609 - AluYa5 SINE Alu -1 310 1 1869 233 40 12 chr2 5042742 5043245 -245644609 + MER97a DNA MER1_type? 369 885 -9 238 299 122 20 chr2 5043569 5043716 -245644138 + MIR SINE MIR 74 235 -27 269 100 20 0 chr2 5043823 5043873 -245643981 + (TC)n Simple_repeat Simple_repeat 1 51 0 211 319 0 0 chr2 5043881 5043950 -245643904 + (CATA)n Simple_repeat Simple_repeat 3 71 0 261 153 82 0 chr2 5045008 5045064 -245642790 - MLT2B3 LTR ERVL 0 554 394 209 184 0 0 chr2 5045064 5045102 -245642752 + (CAGA)n Simple_repeat Simple_repeat 4 41 0 736 144 17 22 chr2 5045102 5045282 -245642572 + (TAGA)n Simple_repeat Simple_repeat 2 180 0 2473 153 113 17 chr2 5045318 5045789 -245642065 - MLT2B3 LTR ERVL -38 516 1 299 272 72 32 chr2 5048526 5048651 -245639203 - L2 LINE L2 -1 3271 3142 341 327 48 48 chr2 5049919 5050170 -245637684 - L3 LINE CR1 -72 1505 1255 243 313 90 8 chr2 5050605 5050739 -245637115 - MIR SINE MIR -8 254 110 638 227 39 0 chr2 5052745 5052899 -245634955 + L1MD1 LINE L1 6083 6242 0 25 0 0 0 chr2 5053996 5054021 -245633833 + AT_rich Low_complexity Low_complexity 1 25 0 218 167 24 0 chr2 5054076 5054118 -245633736 - MIR SINE MIR -112 150 108 201 238 129 20 chr2 5054322 5054423 -245633431 - MIR SINE MIR -77 131 20 304 323 21 21 chr2 5054488 5054584 -245633270 + MIR SINE MIR 21 116 -92 24 0 0 0 chr2 5054768 5054792 -245633062 + AT_rich Low_complexity Low_complexity 1 24 0 3445 158 10 22 chr2 5054817 5054984 -245632870 - L1MA5 LINE L1 0 6300 6132 949 175 0 19 chr2 5054984 5055144 -245632710 + FRAM SINE Alu 1 157 -9 3445 158 10 22 chr2 5055144 5055601 -245632253 - L1MA5 LINE L1 -168 6132 5684 2338 197 3 37 chr2 5055601 5056146 -245631708 + L1MA5 LINE L1 5159 5664 -636 606 240 67 0 chr2 5056179 5056329 -245631525 - MER5A DNA MER1_type -29 160 1 384 88 0 0 chr2 5057364 5057421 -245630433 + (CA)n Simple_repeat Simple_repeat 1 57 0 352 284 0 0 chr2 5058486 5058567 -245629287 - L2 LINE L2 0 3313 3233 264 322 96 9 chr2 5058849 5058964 -245628890 + MIR SINE MIR 20 144 -118 313 287 111 28 chr2 5059200 5059416 -245628438 - HsTC2 DNA Tc2 -1020 878 645 2373 87 7 0 chr2 5059583 5059881 -245627973 + AluSc SINE Alu 2 301 -8 21 36 0 0 chr2 5060002 5060030 -245627824 + AT_rich Low_complexity Low_complexity 1 28 0 213 235 0 29 chr2 5060617 5060685 -245627169 + (TATATG)n Simple_repeat Simple_repeat 4 69 0 242 293 49 0 chr2 5060965 5061047 -245626807 - HsTC2 DNA Tc2 -1329 569 484 * 264 247 13 13 chr2 5061040 5061117 -245626737 - HsTC2 DNA Tc2 -1597 301 225 1976 50 138 4 chr2 5061117 5061377 -245626477 - AluY SINE Alu -6 295 1 22 0 0 0 chr2 5062273 5062295 -245625559 + AT_rich Low_complexity Low_complexity 1 22 0 5015 181 17 13 chr2 5062304 5062684 -245625170 + Tigger3b DNA MER2_type 1 378 -2650 1916 117 50 7 chr2 5062684 5062991 -245624863 - AluSx SINE Alu 0 312 1 5015 181 17 13 chr2 5062991 5063678 -245624176 + Tigger3b DNA MER2_type 378 1231 0 1770 257 82 12 chr2 5063971 5064579 -245623275 - L1MD3 LINE L1 -2 7980 7150 1576 186 133 9 chr2 5064626 5064971 -245622883 - MLT1B LTR MaLR 0 390 3 201 171 24 0 chr2 5065869 5065910 -245621944 + (TG)n Simple_repeat Simple_repeat 2 43 0 311 279 91 61 chr2 5066418 5066615 -245621239 - L2 LINE L2 -4 3309 3107 785 225 108 95 chr2 5067108 5067451 -245620403 - MLT1H LTR MaLR -5 544 148 2082 116 0 26 chr2 5067451 5067753 -245620101 + AluSc SINE Alu 1 294 -15 785 225 108 95 chr2 5067753 5067889 -245619965 - MLT1H LTR MaLR -401 148 15 552 246 75 73 chr2 5068468 5068879 -245618975 + L1MEd LINE L1 823 1234 -4885 310 333 91 29 chr2 5068892 5069135 -245618719 + L1MEd LINE L1 1233 1490 -4639 2161 144 33 33 chr2 5069276 5069638 -245618216 - THE1B LTR MaLR 0 364 3 302 293 78 42 chr2 5071081 5071248 -245616606 + MIR SINE MIR 71 243 -19 285 294 37 37 chr2 5071282 5071391 -245616463 + L3 LINE CR1 1378 1486 -91 186 313 0 0 chr2 5071394 5071442 -245616412 + L2 LINE L2 3212 3259 -13 239 203 31 16 chr2 5071754 5071818 -245616036 - Charlie8 DNA MER1_type -2221 196 132 279 323 39 47 chr2 5072800 5072927 -245614927 + MIR SINE MIR 18 143 -119 341 172 0 0 chr2 5073553 5073611 -245614243 - L1PA16 LINE L1 -200 5966 5909 22 0 0 0 chr2 5074605 5074627 -245613227 + AT_rich Low_complexity Low_complexity 1 22 0 1494 162 4 4 chr2 5074641 5074870 -245612984 - AluSx SINE Alu -31 281 53 401 279 55 64 chr2 5075235 5075454 -245612400 - L2 LINE L2 -5 3308 3092 4683 109 8 5 chr2 5075753 5076392 -245611462 - L1PA10 LINE L1 -11 6157 5517 221 408 17 11 chr2 5076854 5077033 -245610821 + MIR SINE MIR 27 206 -56 212 348 0 0 chr2 5077150 5077219 -245610635 + L2 LINE L2 3204 3272 0 949 234 161 57 chr2 5077704 5078370 -245609484 - HAL1 LINE L1 -83 2424 1690 1039 258 119 34 chr2 5078460 5078729 -245609125 - HAL1 LINE L1 -647 1860 1537 2019 129 7 13 chr2 5078729 5079088 -245608766 + AluSx SINE Alu 1 312 0 1039 258 119 34 chr2 5079088 5079264 -245608590 - HAL1 LINE L1 -970 1537 1377 660 256 76 19 chr2 5079675 5079937 -245607917 - HAL1 LINE L1 -1119 1388 1112 589 302 109 13 chr2 5079963 5080274 -245607580 - HAL1 LINE L1 -1540 967 627 1182 238 32 18 chr2 5080475 5080757 -245607097 - HAL1 LINE L1 -2208 299 14 182 322 132 40 chr2 5080925 5081099 -245606755 - MIR SINE MIR 0 262 73 291 334 62 15 chr2 5081657 5081821 -245606033 + MIR SINE MIR 5 171 -37 32 0 0 0 chr2 5081868 5081900 -245605954 + AT_rich Low_complexity Low_complexity 1 32 0 532 330 84 44 chr2 5082054 5082471 -245605383 + L2 LINE L2 2204 2644 -670 2718 116 36 3 chr2 5082471 5082834 -245605020 + THE1C LTR MaLR 1 375 0 532 330 84 44 chr2 5082834 5082894 -245604960 + L2 LINE L2 2644 2700 -614 309 297 89 0 chr2 5083255 5083356 -245604498 + L2 LINE L2 3204 3313 0 203 224 20 0 chr2 5083431 5083480 -245604374 + (TAAA)n Simple_repeat Simple_repeat 1 50 0 305 89 0 0 chr2 5086406 5086451 -245601403 + AluSc SINE Alu 253 297 -2 2631 51 0 0 chr2 5086718 5087029 -245600825 - AluYa5 SINE Alu 0 311 1 228 347 0 21 chr2 5088041 5088136 -245599718 + MIR SINE MIR 24 116 -92 2380 85 3 0 chr2 5088219 5088526 -245599328 - AluY SINE Alu -3 308 1 2092 104 42 3 chr2 5089525 5089813 -245598041 + AluSx SINE Alu 2 300 -12 388 293 129 30 chr2 5090177 5090409 -245597445 + MLT1J2 LTR MaLR 48 302 -148 213 21 21 83 chr2 5090697 5090745 -245597109 + (TTTTTG)n Simple_repeat Simple_repeat 4 48 0 446 235 18 12 chr2 5091023 5091189 -245596665 + GA-rich Low_complexity Low_complexity 1 167 0 291 343 71 7 chr2 5092389 5092529 -245595325 + MIR SINE MIR 20 168 -94 181 362 48 38 chr2 5092636 5092741 -245595113 - L2 LINE L2 -22 3250 3145 2301 52 38 17 chr2 5092948 5093238 -245594616 + AluY SINE Alu 1 296 -15 276 322 86 53 chr2 5093788 5093940 -245593914 - L2 LINE L2 -4 3268 3112 232 360 35 9 chr2 5094759 5094873 -245592981 - MIR SINE MIR -76 132 16 260 341 31 23 chr2 5096467 5096596 -245591258 - MER5B DNA MER1_type -44 134 5 2000 137 3 0 chr2 5096661 5096954 -245590900 + AluSx SINE Alu 1 294 -18 248 111 0 0 chr2 5099336 5099372 -245588482 - U2 snRNA snRNA -152 36 1 328 177 51 0 chr2 5099388 5099467 -245588387 - MIR SINE MIR -115 147 65 2289 75 0 4 chr2 5099471 5099819 -245588035 - AluY SINE Alu 0 347 1 291 54 0 0 chr2 5100593 5100630 -245587224 + (TATG)n Simple_repeat Simple_repeat 2 38 0 256 131 16 16 chr2 5101029 5101090 -245586764 + (TCCA)n Simple_repeat Simple_repeat 1 61 0 793 337 38 27 chr2 5101103 5101673 -245586181 - L2 LINE L2 0 3313 2737 776 226 27 27 chr2 5101696 5101882 -245585972 + MLT2B1 LTR ERVL 1 186 -334 1912 197 33 3 chr2 5102057 5102423 -245585431 + MLT2B1 LTR ERVL 144 520 0 404 351 71 14 chr2 5102440 5102651 -245585203 - L2 LINE L2 -605 2709 2487 22 0 0 0 chr2 5103391 5103413 -245584441 + AT_rich Low_complexity Low_complexity 1 22 0 887 192 0 11 chr2 5103420 5103656 -245584198 - AluJb SINE Alu -17 295 1 276 30 0 0 chr2 5103674 5103707 -245584147 + (A)n Simple_repeat Simple_repeat 1 33 0 2152 297 158 22 chr2 5104046 5105238 -245582616 + L2 LINE L2 1933 3277 -36 2094 132 0 0 chr2 5105431 5105726 -245582128 - AluSx SINE Alu -17 295 1 21 57 0 0 chr2 5105829 5105864 -245581990 + AT_rich Low_complexity Low_complexity 1 35 0 22799 104 3 2 chr2 5105962 5109890 -245577964 - L1PA7 LINE L1 -4 6465 2541 1620 127 17 0 chr2 5109898 5110135 -245577719 - L1PA7 LINE L1 -6213 248 8 551 282 23 0 chr2 5110473 5110693 -245577161 - L1MEc LINE L1 -5466 930 706 467 366 51 15 chr2 5110709 5111040 -245576814 - L1MEc LINE L1 -5941 455 113 1034 204 194 142 chr2 5111048 5111828 -245576026 + MER52A LTR ERV1 667 1486 -269 433 252 16 16 chr2 5111822 5111949 -245575905 + MER52A LTR ERV1 1599 1725 -30 * 236 288 0 0 chr2 5112173 5112246 -245575608 - MER5A DNA MER1_type -113 76 4 231 351 14 0 chr2 5113071 5113145 -245574709 - L2 LINE L2 -206 3066 2992 362 343 30 18 chr2 5113159 5113325 -245574529 + MIR SINE MIR 42 209 -53 1499 227 41 78 chr2 5113337 5113822 -245574032 + MLT1C LTR MaLR 1 467 0 292 283 186 0 chr2 5115119 5115232 -245572622 - L2 LINE L2 -1 3312 3179 455 251 123 18 chr2 5115588 5115751 -245572103 + MIR SINE MIR 2 181 -81 246 358 13 20 chr2 5116468 5116619 -245571235 - MIR3 SINE MIR -4 204 55 228 304 33 22 chr2 5117251 5117343 -245570511 - MIR3 SINE MIR -3 205 113 194 294 0 0 chr2 5118591 5118642 -245569212 - MIR SINE MIR -65 143 93 195 352 62 52 chr2 5119785 5119978 -245567876 + MIR SINE MIR 20 214 -48 227 240 132 107 chr2 5120081 5120202 -245567652 + MIR SINE MIR 61 184 -78 393 239 97 13 chr2 5120239 5120394 -245567460 - MIR SINE MIR -14 248 81 1044 232 30 4 chr2 5122191 5122424 -245565430 + MLT1B LTR MaLR 152 390 0 2540 133 11 3 chr2 5122575 5122936 -245564918 - THE1B LTR MaLR 0 364 1 1254 272 32 3 chr2 5122972 5123343 -245564511 + L1ME2 LINE L1 3938 4319 -1827 888 262 40 15 chr2 5123395 5123723 -245564131 + L1ME2 LINE L1 4409 4744 -1402 1091 280 35 8 chr2 5123723 5124327 -245563527 + L1ME2 LINE L1 4996 5616 -550 1096 217 122 9 chr2 5124339 5124845 -245563009 - MLT1E1 LTR MaLR -14 640 1 1771 235 43 50 chr2 5124852 5125412 -245562442 + L1ME2 LINE L1 5617 6332 -2 223 344 86 6 chr2 5129252 5129415 -245558439 - L3 LINE CR1 -570 1007 832 313 255 0 85 chr2 5129452 5129558 -245558296 - MIR SINE MIR -7 255 159 328 292 101 17 chr2 5129955 5130133 -245557721 + MIR SINE MIR 8 200 -62 195 282 14 28 chr2 5130535 5130606 -245557248 + MIR SINE MIR 69 138 -124 6177 166 59 20 chr2 5131805 5132544 -245555310 + Tigger3b DNA MER2_type 1 805 -2223 1552 190 35 7 chr2 5132544 5132834 -245555020 + AluJb SINE Alu 1 298 -14 6177 166 59 20 chr2 5132834 5133278 -245554576 + Tigger3b DNA MER2_type 805 1230 -1 2544 38 0 0 chr2 5133671 5133961 -245553893 - AluY SINE Alu -21 290 1 323 311 0 0 chr2 5134009 5134099 -245553755 + L1MC4 LINE L1 6614 6703 -1339 237 183 50 0 chr2 5134116 5134176 -245553678 + L1MCa LINE L1 2006 2068 -4358 * 258 256 47 0 chr2 5134143 5134229 -245553625 - L1MC4 LINE L1 -1339 6703 6614 207 100 0 0 chr2 5134234 5134264 -245553590 + (TA)n Simple_repeat Simple_repeat 1 30 0 237 174 0 0 chr2 5134269 5134315 -245553539 - LTR66 LTR ERVL -171 439 394 234 191 0 0 chr2 5134277 5134324 -245553530 + LTR66 LTR ERVL 394 440 -170 * 236 131 16 66 chr2 5134348 5134409 -245553445 - LTR66 LTR ERVL -171 439 382 197 175 38 12 chr2 5134616 5134630 -245553224 + (TA)n Simple_repeat Simple_repeat 1 13 -69 1912 99 8 8 chr2 5134630 5134893 -245552961 + AluSc SINE Alu 35 297 -12 197 175 38 12 chr2 5134893 5134958 -245552896 + (TA)n Simple_repeat Simple_repeat 13 82 0 827 281 68 35 chr2 5137111 5137631 -245550223 + L1ME LINE L1 1071 1553 -4873 1148 248 73 29 chr2 5137665 5138241 -245549613 + L1ME LINE L1 5290 5889 -557 1899 201 70 27 chr2 5138241 5138685 -245549169 - MLT1C LTR MaLR 0 467 5 1148 248 73 29 chr2 5138685 5138723 -245549131 + L1ME LINE L1 5889 5924 -522 877 120 0 0 chr2 5139408 5139563 -245548291 + AluSp/q SINE Alu 168 322 0 6571 63 141 13 chr2 5139702 5140599 -245547255 - L1PA5 LINE L1 0 6154 5228 23274 54 3 0 chr2 5140702 5143630 -245544224 - L1P LINE L1 -818 5328 2391 230 175 79 48 chr2 5144855 5144918 -245542936 - MLT1G1 LTR MaLR -1 554 490 1403 72 0 15 chr2 5144924 5145119 -245542735 - AluY SINE Alu -13 298 107 338 250 126 18 chr2 5145120 5145473 -245542381 - MLT1G1 LTR MaLR -66 529 83 253 336 77 10 chr2 5145676 5145780 -245542074 - MIR3 SINE MIR -84 124 14 209 265 0 0 chr2 5146240 5146289 -245541565 - MIR SINE MIR -56 206 158 940 219 73 155 chr2 5146513 5146964 -245540890 + MLT2B1 LTR ERVL 1 414 0 23 78 0 0 chr2 5147857 5147908 -245539946 + AT_rich Low_complexity Low_complexity 1 51 0 21 82 0 0 chr2 5198933 5198982 -245488872 + AT_rich Low_complexity Low_complexity 1 49 0 2714 214 78 0 chr2 5198986 5199562 -245488292 + L1M2b LINE L1 184 804 -6405 3369 209 33 23 chr2 5199573 5200429 -245487425 + L1M2b LINE L1 1568 2431 -4778 309 286 118 8 chr2 5200785 5200904 -245486950 - MIR SINE MIR -6 256 125 2298 87 7 10 chr2 5200921 5201221 -245486633 + AluSq SINE Alu 1 299 -14 601 158 44 3 chr2 5201541 5201672 -245486182 - L1MA4 LINE L1 -143 6148 6015 601 214 71 0 chr2 5201673 5201813 -245486041 + L1MA4 LINE L1 6151 6300 0 219 366 62 22 chr2 5202397 5202624 -245485230 - MIR SINE MIR -6 256 21 229 278 135 32 chr2 5203707 5203833 -245484021 + L2 LINE L2 3112 3250 -22 4989 230 19 11 chr2 5205205 5206444 -245481410 + L1M1 LINE L1 480 2407 -5158 2048 160 16 34 chr2 5207802 5208190 -245479664 + L1MC1 LINE L1 5939 6319 -14 24 32 0 0 chr2 5208221 5208252 -245479602 + AT_rich Low_complexity Low_complexity 1 31 0 1541 209 39 7 chr2 5208256 5208538 -245479316 - AluJb SINE Alu -11 291 1 185 266 129 73 chr2 5208680 5208804 -245479050 + MIR3 SINE MIR 67 197 -11 876 204 72 19 chr2 5209175 5209521 -245478333 + MER4B-int LTR ERV1 1702 2960 -2362 * 1032 211 45 59 chr2 5209507 5210292 -245477562 + MER4B-int LTR ERV1 1546 2439 -4319 2568 48 3 10 chr2 5211070 5211383 -245476471 + AluY SINE Alu 1 311 0 280 278 43 81 chr2 5212023 5212140 -245475714 - LTR33 LTR ERVL -19 502 395 2520 192 108 27 chr2 5212140 5212610 -245475244 + MLT2B3 LTR ERVL 3 519 -35 477 34 0 0 chr2 5212610 5212669 -245475185 + (TCTA)n Simple_repeat Simple_repeat 2 60 0 2520 192 108 27 chr2 5212669 5212709 -245475145 + MLT2B3 LTR ERVL 519 554 0 280 278 43 81 chr2 5212709 5212800 -245475054 - LTR33 LTR ERVL -126 395 302 319 352 23 16 chr2 5213027 5213155 -245474699 - MIR SINE MIR -62 146 18 457 288 65 0 chr2 5213534 5213673 -245474181 - MIR3 SINE MIR -31 177 30 314 307 98 7 chr2 5213813 5213966 -245473888 + MER5A DNA MER1_type 17 183 -6 192 218 64 77 chr2 5214071 5214149 -245473705 - L2 LINE L2 -6 3307 3231 2747 13 7 0 chr2 5214417 5214721 -245473133 - AluYa5 SINE Alu -5 306 1 1983 146 27 0 chr2 5214933 5215234 -245472620 - AluSx SINE Alu -2 310 2 193 243 68 27 chr2 5215309 5215383 -245472471 - MIR SINE MIR -66 142 66 208 402 0 0 chr2 5215678 5215780 -245472074 - MIR SINE MIR -113 149 48 525 301 49 30 chr2 5215924 5216127 -245471727 - MLT1H LTR MaLR -226 323 117 885 137 53 69 chr2 5216229 5216420 -245471434 + THE1B LTR MaLR 183 364 0 4376 225 26 38 chr2 5216420 5217292 -245470562 + L1M2 LINE L1 2633 3481 -3367 1667 177 20 7 chr2 5217292 5217586 -245470268 + AluJb SINE Alu 1 298 -14 4376 225 26 38 chr2 5217586 5218251 -245469603 + L1M2 LINE L1 3481 4152 -2696 789 161 25 6 chr2 5218351 5218512 -245469342 + L1M2 LINE L1 2010 2173 -4676 225 0 0 0 chr2 5218512 5218537 -245469317 + (CA)n Simple_repeat Simple_repeat 2 26 0 732 206 14 0 chr2 5218539 5218680 -245469174 + L1M2 LINE L1 2495 2637 -4212 2099 115 58 60 chr2 5218680 5219045 -245468809 + THE1B LTR MaLR 1 364 0 10894 105 37 4 chr2 5219046 5220574 -245467280 + THE1B-int LTR MaLR 2 1580 0 1232 167 13 35 chr2 5220574 5220802 -245467052 + THE1B LTR MaLR 1 223 -152 1272 231 23 13 chr2 5221912 5222211 -245465643 - AluJb SINE Alu 0 302 1 315 0 0 0 chr2 5222647 5222682 -245465172 + (TG)n Simple_repeat Simple_repeat 2 36 0 2022 124 3 3 chr2 5222710 5223008 -245464846 - AluY SINE Alu -13 298 1 527 276 33 28 chr2 5223020 5223031 -245464823 - L1M3c LINE L1 -4846 1119 1110 2205 89 4 0 chr2 5223031 5223312 -245464542 - AluY SINE Alu -29 282 1 527 276 33 28 chr2 5223312 5223514 -245464340 - L1M3c LINE L1 -4855 1110 898 24 67 0 0 chr2 5223572 5223617 -245464237 + AT_rich Low_complexity Low_complexity 1 45 0 1782 165 118 48 chr2 5223757 5223799 -245464055 - MSTA LTR MaLR 0 428 390 2252 143 21 26 chr2 5223799 5224176 -245463678 + THE1C LTR MaLR 1 375 0 1782 165 118 48 chr2 5224176 5224533 -245463321 - MSTA LTR MaLR -38 390 1 2072 172 6 0 chr2 5224534 5224894 -245462960 - MSTA-int LTR MaLR -1 1650 1289 385 188 25 0 chr2 5224894 5224974 -245462880 - MSTA-int LTR MaLR -1523 128 47 236 208 112 80 chr2 5225646 5225771 -245462083 + MIR SINE MIR 65 193 -69 2837 207 28 5 chr2 5225828 5226407 -245461447 - MER6A DNA MER2_type -13 592 1 1764 180 49 27 chr2 5226867 5227234 -245460620 + THE1C LTR MaLR 1 375 0 180 0 0 0 chr2 5227996 5228016 -245459838 + (TTA)n Simple_repeat Simple_repeat 2 21 0 1848 154 0 3 chr2 5228440 5228733 -245459121 - AluSg SINE Alu -10 300 9 188 353 67 34 chr2 5228923 5229042 -245458812 - MIR3 SINE MIR -83 125 3 3026 135 41 2 chr2 5229962 5230430 -245457424 - LTR19A LTR ERV1 0 486 1 2192 89 4 0 chr2 5231403 5231722 -245456132 + AluY SINE Alu 1 320 0 227 250 87 43 chr2 5232525 5232617 -245455237 + LTR16C LTR ERVL 394 489 -2 419 259 186 14 chr2 5232893 5233113 -245454741 + L1M4 LINE L1 4869 5126 -1020 319 189 0 14 chr2 5233111 5233185 -245454669 + L1ME2 LINE L1 6077 6149 -15 * 182 263 152 10 chr2 5233700 5233799 -245454055 + L2 LINE L2 3138 3250 -22 509 278 76 65 chr2 5237247 5237510 -245450344 - MLT1J LTR MaLR -244 267 2 195 235 0 0 chr2 5238578 5238629 -245449225 + (TG)n Simple_repeat Simple_repeat 2 52 0 342 0 0 0 chr2 5238751 5238789 -245449065 + (CA)n Simple_repeat Simple_repeat 2 39 0 24 0 0 0 chr2 5239725 5239749 -245448105 + AT_rich Low_complexity Low_complexity 1 24 0 186 342 103 8 chr2 5242036 5242153 -245445701 + MIR SINE MIR 122 249 -13 236 281 70 0 chr2 5242340 5242397 -245445457 + MIR SINE MIR 66 126 -82 1698 206 28 0 chr2 5246118 5246574 -245441280 - MLT2B1 LTR ERVL 0 520 1 216 297 16 0 chr2 5247741 5247805 -245440049 - MIR SINE MIR -110 152 88 318 264 29 106 chr2 5249238 5249446 -245438408 + L1MEd LINE L1 332 523 -5596 396 0 0 0 chr2 5250087 5250131 -245437723 + (CA)n Simple_repeat Simple_repeat 2 45 0 228 35 0 0 chr2 5250970 5250999 -245436855 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 2127 101 11 0 chr2 5251000 5251277 -245436577 - AluSp SINE Alu -33 280 1 247 348 90 45 chr2 5252886 5253130 -245434724 - L2 LINE L2 -27 3245 2991 211 336 53 30 chr2 5253111 5253242 -245434612 - L2 LINE L2 -456 2858 2725 * 223 273 70 39 chr2 5253529 5253657 -245434197 - L2 LINE L2 -935 2379 2248 645 194 7 0 chr2 5253936 5254080 -245433774 + L1MA9 LINE L1 6166 6310 -2 1772 187 13 7 chr2 5254102 5254412 -245433442 + AluJb SINE Alu 1 312 0 345 292 81 27 chr2 5255503 5255688 -245432166 - MIR SINE MIR -9 253 59 2804 16 0 10 chr2 5255948 5256261 -245431593 + AluYa5 SINE Alu 1 310 -1 1584 214 13 34 chr2 5256522 5256901 -245430953 - MLT1A2 LTR MaLR -2 372 2 609 258 171 15 chr2 5256974 5257238 -245430616 + MLT1G1 LTR MaLR 291 595 0 466 299 71 51 chr2 5257985 5258377 -245429477 + L2 LINE L2 2914 3313 0 237 132 0 0 chr2 5259128 5259166 -245428688 + (TA)n Simple_repeat Simple_repeat 1 38 0 1237 91 0 141 chr2 5260237 5260391 -245427463 + MER30 DNA MER1_type 5 114 -116 1578 42 0 5 chr2 5260391 5260582 -245427272 - L1PA5 LINE L1 0 6154 5965 1237 91 0 141 chr2 5260582 5260669 -245427185 + MER30 DNA MER1_type 114 212 -18 199 61 61 0 chr2 5261958 5261991 -245425863 + A-rich Low_complexity Low_complexity 3 37 0 232 244 51 0 chr2 5262290 5262368 -245425486 - L1 LINE L1 -1161 4985 4904 2128 145 0 0 chr2 5262520 5262817 -245425037 - AluSx SINE Alu -15 297 1 516 325 42 0 chr2 5263951 5264155 -245423699 + HERVL LTR ERVL 4103 4366 -1398 220 353 17 17 chr2 5264694 5264813 -245423041 - MIR SINE MIR -107 155 37 1107 81 0 27 chr2 5265565 5265617 -245422237 + (GAAA)n Simple_repeat Simple_repeat 1 230 0 1107 81 0 27 chr2 5265617 5265802 -245422052 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 426 302 94 5 chr2 5266209 5266401 -245421453 - MIR SINE MIR -6 256 48 238 234 16 0 chr2 5267476 5267540 -245420314 - L2 LINE L2 -527 2787 2723 332 312 82 12 chr2 5267710 5267880 -245419974 + L2 LINE L2 3117 3298 -15 305 260 67 90 chr2 5270568 5270791 -245417063 - L1ME4a LINE L1 -1 6120 5903 325 239 34 15 chr2 5271243 5271272 -245416582 - L1ME4a LINE L1 -850 5296 5269 369 0 0 0 chr2 5271272 5271313 -245416541 + (TG)n Simple_repeat Simple_repeat 2 42 0 325 239 34 15 chr2 5271313 5271420 -245416434 - L1ME4a LINE L1 -877 5269 5157 7159 45 3 1 chr2 5271475 5272930 -245414924 - L1PA6 LINE L1 0 6154 4682 257 222 0 0 chr2 5272943 5273006 -245414848 - L1ME4a LINE L1 -985 5161 5099 1827 122 0 0 chr2 5274183 5274421 -245413433 + AluSx SINE Alu 1 238 -74 1682 150 3 77 chr2 5274828 5275201 -245412653 - MER4A LTR ERV1 0 664 261 656 98 10 49 chr2 5275201 5275303 -245412551 - MER4A LTR ERV1 -566 98 1 23 0 0 0 chr2 5275747 5275770 -245412084 + AT_rich Low_complexity Low_complexity 1 23 0 2213 129 0 3 chr2 5275775 5276084 -245411770 + AluSq SINE Alu 3 310 -3 225 272 0 65 chr2 5276089 5276181 -245411673 - MER5A DNA MER1_type -50 139 54 1629 199 141 111 chr2 5276429 5277333 -245410521 - LTR1B LTR ERV1 0 1020 1 268 244 103 0 chr2 5278474 5278552 -245409302 - L2 LINE L2 -17 3255 3170 22 0 0 0 chr2 5278875 5278897 -245408957 + AT_rich Low_complexity Low_complexity 1 22 0 762 120 0 0 chr2 5278929 5279037 -245408817 - L1MA3 LINE L1 -2 6303 6196 200 118 29 0 chr2 5279374 5279408 -245408446 + (CATA)n Simple_repeat Simple_repeat 4 38 0 237 196 0 0 chr2 5279416 5279472 -245408382 + (CA)n Simple_repeat Simple_repeat 2 57 0 570 291 12 36 chr2 5280295 5280546 -245407308 + MIR SINE MIR 12 256 -6 1637 173 0 11 chr2 5281480 5281746 -245406108 + AluJb SINE Alu 1 263 -49 2216 103 3 17 chr2 5281845 5282145 -245405709 + AluSg SINE Alu 1 296 -14 376 227 100 0 chr2 5283146 5283256 -245404598 - MER58B DNA MER1_type 0 341 221 1404 250 72 42 chr2 5283522 5284134 -245403720 - Charlie7 DNA MER1_type -263 2349 1720 469 312 24 5 chr2 5284174 5284379 -245403475 - Charlie7 DNA MER1_type -2070 542 334 225 179 143 36 chr2 5284408 5284464 -245403390 + Tigger5 DNA MER2_type 1 62 -2261 * 1574 139 12 0 chr2 5284462 5284714 -245403140 + Tigger5 DNA MER2_type 2062 2316 -7 436 341 36 14 chr2 5284737 5285013 -245402841 - Charlie7 DNA MER1_type -2330 282 1 451 228 19 6 chr2 5285337 5285654 -245402200 + (TG)n Simple_repeat Simple_repeat 1 321 0 437 206 11 22 chr2 5285707 5285887 -245401967 + (TG)n Simple_repeat Simple_repeat 1 178 0 410 214 11 22 chr2 5285933 5286111 -245401743 + (TG)n Simple_repeat Simple_repeat 1 176 0 784 209 91 5 chr2 5287379 5287589 -245400265 + L1MB8 LINE L1 5945 6172 -6 243 0 0 0 chr2 5288305 5288332 -245399522 + (A)n Simple_repeat Simple_repeat 1 27 0 971 268 166 13 chr2 5288872 5289324 -245398530 + MLT1H LTR MaLR 4 524 -25 263 263 22 0 chr2 5289907 5289980 -245397874 + MIR SINE MIR 45 121 -87 366 297 79 42 chr2 5290604 5290769 -245397085 - MIR3 SINE MIR -10 198 28 2663 87 34 8 chr2 5291183 5291563 -245396291 + MLT2A1 LTR ERVL 1 390 -54 222 37 0 0 chr2 5291563 5291590 -245396264 + (TA)n Simple_repeat Simple_repeat 2 28 0 387 54 0 18 chr2 5291721 5291777 -245396077 - MLT2A2 LTR ERVL 0 453 399 249 650 0 13 chr2 5291777 5291934 -245395920 + (TA)n Simple_repeat Simple_repeat 2 156 0 326 58 19 19 chr2 5291963 5292015 -245395839 - MLT2A2 LTR ERVL -2 451 400 298 20 82 20 chr2 5292001 5292050 -245395804 + MLT2A1 LTR ERVL 393 444 0 * 417 278 82 64 chr2 5292249 5292893 -245394961 + L1MEd LINE L1 594 1249 -4870 934 271 41 39 chr2 5293109 5293544 -245394310 + L1ME1 LINE L1 5571 6006 -160 456 271 25 88 chr2 5293537 5293777 -245394077 + L1ME1 LINE L1 5895 6119 -47 * 1710 194 108 14 chr2 5293917 5294335 -245393519 - MSTB2 LTR MaLR 0 457 1 29 0 0 0 chr2 5294383 5294412 -245393442 + AT_rich Low_complexity Low_complexity 1 29 0 1567 207 78 58 chr2 5294506 5294671 -245393183 - L1M1 LINE L1 -738 5428 5268 261 0 0 0 chr2 5294671 5294700 -245393154 + (TG)n Simple_repeat Simple_repeat 2 30 0 189 0 0 0 chr2 5294699 5294720 -245393134 + (TA)n Simple_repeat Simple_repeat 1 21 0 * 1567 207 78 58 chr2 5294700 5294720 -245393134 - L1M1 LINE L1 -898 5268 5250 1954 147 0 28 chr2 5294720 5295040 -245392814 - AluSx SINE Alu -1 311 1 1567 207 78 58 chr2 5295040 5295685 -245392169 - L1M1 LINE L1 -916 5250 4639 1027 307 19 5 chr2 5295686 5296057 -245391797 - L1MEc LINE L1 -5713 683 308 2579 87 8 46 chr2 5296271 5296661 -245391193 - THE1C LTR MaLR 0 375 1 214 300 14 14 chr2 5296679 5296749 -245391105 + GA-rich Low_complexity Low_complexity 2 71 0 350 226 0 36 chr2 5297314 5297398 -245390456 - MIR SINE MIR 0 262 182 5395 129 4 0 chr2 5297452 5297801 -245390053 - L1PB1 LINE L1 -3 6148 5802 261 0 0 0 chr2 5297801 5297830 -245390024 + (TA)n Simple_repeat Simple_repeat 1 29 0 5395 129 4 0 chr2 5297830 5298716 -245389138 - L1PB1 LINE L1 -349 5802 4898 245 269 76 50 chr2 5299105 5299224 -245388630 - MLT1K LTR MaLR -60 528 407 931 153 71 6 chr2 5299307 5299477 -245388377 - MLT1A1 LTR MaLR 0 365 185 206 203 0 17 chr2 5299851 5299910 -245387944 + CT-rich Low_complexity Low_complexity 1 58 0 33 0 0 0 chr2 5299964 5299997 -245387857 + AT_rich Low_complexity Low_complexity 1 33 0 1663 115 70 0 chr2 5301216 5301503 -245386351 - L1MA8 LINE L1 -5 6286 5980 231 133 0 0 chr2 5301540 5301585 -245386269 + (TG)n Simple_repeat Simple_repeat 2 46 0 390 308 84 42 chr2 5302301 5302658 -245385196 - L1ME4a LINE L1 -2 6119 5748 1446 201 35 6 chr2 5302817 5303160 -245384694 - L1MA8 LINE L1 -1 6290 5938 624 191 43 0 chr2 5303161 5303276 -245384578 - FLAM_C SINE Alu -10 133 14 2265 97 3 7 chr2 5303448 5303747 -245384107 - AluY SINE Alu -13 298 1 274 338 120 15 chr2 5303834 5303967 -245383887 + MIR SINE MIR 49 195 -67 226 309 59 0 chr2 5304005 5304073 -245383781 - MIR SINE MIR -101 161 90 233 293 53 67 chr2 5304669 5304819 -245383035 + L2 LINE L2 3111 3258 -55 295 282 113 81 chr2 5304943 5305191 -245382663 + MIR SINE MIR 1 256 -6 317 281 45 19 chr2 5305286 5305420 -245382434 + MLT1J2 LTR MaLR 6 142 -304 457 266 24 16 chr2 5305425 5305549 -245382305 - MER94 DNA DNA -9 125 1 366 239 84 42 chr2 5305671 5305813 -245382041 + MLT1J2 LTR MaLR 284 431 -19 21 0 0 0 chr2 5305979 5306000 -245381854 + AT_rich Low_complexity Low_complexity 1 21 0 1748 194 39 19 chr2 5306726 5307184 -245380670 + MLT2B1 LTR ERVL 1 513 -2 2029 116 39 0 chr2 5308506 5308790 -245379064 - AluSq SINE Alu -18 295 1 183 129 0 0 chr2 5308937 5308968 -245378886 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 783 196 21 11 chr2 5308973 5309162 -245378692 - L1MA3 LINE L1 -1 6304 6114 1117 40 34 17 chr2 5309296 5309320 -245378534 + (GAAA)n Simple_repeat Simple_repeat 1 202 0 1117 40 34 17 chr2 5309320 5309495 -245378359 + (GAAA)n Simple_repeat Simple_repeat 2 179 0 2367 196 41 53 chr2 5310237 5310629 -245377225 - L1MC3 LINE L1 0 7785 7390 297 0 0 0 chr2 5310629 5310662 -245377192 + (TTTA)n Simple_repeat Simple_repeat 2 34 0 4913 45 0 0 chr2 5310672 5311268 -245376586 - L1PA5 LINE L1 -3 6151 5556 2367 196 41 53 chr2 5311268 5311470 -245376384 - L1MC3 LINE L1 -404 7381 7187 2960 257 65 47 chr2 5311537 5313948 -245373906 - L1M4c LINE L1 -2427 3955 1442 193 252 30 8 chr2 5313983 5314114 -245373740 + (TA)n Simple_repeat Simple_repeat 1 134 0 1563 236 48 21 chr2 5314123 5314501 -245373353 - L1M3c LINE L1 -4516 1955 1457 2459 73 3 0 chr2 5314501 5314804 -245373050 - AluY SINE Alu -7 304 1 1563 236 48 21 chr2 5314804 5315006 -245372848 - L1M3c LINE L1 -5014 1457 1262 343 274 32 48 chr2 5315060 5315184 -245372670 - L1M4 LINE L1 -993 5153 5032 773 150 101 97 chr2 5315249 5315291 -245372563 - MSTA LTR MaLR 0 428 388 2089 141 21 26 chr2 5315291 5315668 -245372186 + THE1C LTR MaLR 1 375 0 773 150 101 97 chr2 5315668 5315832 -245372022 - MSTA LTR MaLR -40 388 221 1936 150 6 0 chr2 5315945 5316259 -245371595 - THE1C-int LTR MaLR -47 1604 1289 440 214 94 0 chr2 5316259 5316376 -245371478 - THE1C-int LTR MaLR -1523 128 1 1072 187 75 85 chr2 5316376 5316751 -245371103 - THE1C LTR MaLR 0 375 5 21 71 0 0 chr2 5316948 5316990 -245370864 + AT_rich Low_complexity Low_complexity 1 42 0 361 318 78 7 chr2 5320081 5320235 -245367619 - MIR SINE MIR -11 251 87 226 316 22 81 chr2 5322357 5322493 -245365361 - MIR SINE MIR -116 146 19 405 281 125 66 chr2 5322994 5323403 -245364451 - MLT1H LTR MaLR -2 547 115 229 235 37 26 chr2 5324124 5324264 -245363590 - L2 LINE L2 -3 3310 3116 367 257 62 49 chr2 5324363 5324507 -245363347 + MIR SINE MIR 61 206 -56 468 0 0 0 chr2 5324561 5324613 -245363241 + (TG)n Simple_repeat Simple_repeat 2 53 0 189 159 0 114 chr2 5325711 5325755 -245362099 - L2 LINE L2 -11 3261 3223 254 319 21 14 chr2 5325778 5325919 -245361935 - L1MA9 LINE L1 -38 6274 6133 1840 135 46 0 chr2 5327885 5328195 -245359659 - AluSx SINE Alu 0 312 1 933 127 8 0 chr2 5328379 5328513 -245359341 + AluSg/x SINE Alu 164 298 -14 1061 174 15 0 chr2 5328862 5329057 -245358797 + L1PB1 LINE L1 3 200 -6663 * 4014 117 16 12 chr2 5329049 5330208 -245357646 + L1PB1 LINE L1 625 1937 -4926 1413 216 63 23 chr2 5330341 5330689 -245357165 + LTR10A LTR ERV1 181 542 -67 7830 207 40 45 chr2 5330705 5332761 -245355093 + L1PB1 LINE L1 1932 3997 -2870 1720 77 0 14 chr2 5332761 5332981 -245354873 - AluY SINE Alu -15 296 80 7830 207 40 45 chr2 5332981 5333467 -245354387 + L1PB1 LINE L1 3997 4484 -2383 2233 102 0 7 chr2 5333467 5333762 -245354092 + AluSc SINE Alu 1 293 -16 7830 207 40 45 chr2 5333762 5335970 -245351884 + L1PB1 LINE L1 4484 6652 -215 247 284 75 0 chr2 5336269 5336336 -245351518 + L2 LINE L2 3200 3271 -1 2371 226 32 12 chr2 5336523 5336980 -245350874 + L1MA9 LINE L1 5701 6173 -139 198 71 0 0 chr2 5336980 5337008 -245350846 + (CA)n Simple_repeat Simple_repeat 1 28 0 2371 226 32 12 chr2 5337008 5337112 -245350742 + L1MA9 LINE L1 6173 6273 -39 221 365 25 45 chr2 5337830 5338030 -245349824 - MIR SINE MIR -14 248 53 2010 57 0 4 chr2 5339453 5339698 -245348156 - AluY SINE Alu -67 244 1 705 213 37 84 chr2 5339984 5340521 -245347333 - L1MC4 LINE L1 -6 8036 7373 219 267 33 0 chr2 5340757 5340817 -245347037 + L2 LINE L2 3230 3291 -22 385 355 48 35 chr2 5340909 5341140 -245346714 + L2 LINE L2 2851 3084 -188 2173 95 3 0 chr2 5343590 5343909 -245343945 + AluSx SINE Alu 1 320 0 1344 226 30 39 chr2 5345303 5345728 -245342126 + L1MC4 LINE L1 7634 8042 0 183 248 69 79 chr2 5348547 5348648 -245339206 - L3 LINE CR1 -641 936 837 249 274 108 49 chr2 5349903 5350005 -245337849 + MIR SINE MIR 26 133 -75 1610 78 10 5 chr2 5352027 5352259 -245335595 - AluSg/x SINE Alu 0 308 76 240 247 0 0 chr2 5352934 5353019 -245334835 + GA-rich Low_complexity Low_complexity 2 86 0 22 0 0 0 chr2 5353137 5353159 -245334695 + AT_rich Low_complexity Low_complexity 1 22 0 610 287 56 15 chr2 5353926 5354121 -245333733 + MLT1A2 LTR MaLR 1 203 -171 757 229 24 7 chr2 5354147 5354369 -245333485 + MLT1A2 LTR MaLR 154 372 -2 23 0 0 0 chr2 5354702 5354725 -245333129 + AT_rich Low_complexity Low_complexity 1 23 0 311 270 61 86 chr2 5354794 5354957 -245332897 - MIR SINE MIR -70 192 34 206 252 19 68 chr2 5357536 5357639 -245330215 + MIR SINE MIR 114 211 -51 203 269 58 0 chr2 5357909 5357961 -245329893 - MIR SINE MIR -60 148 94 309 285 199 8 chr2 5360575 5360731 -245327123 + MIR3 SINE MIR 2 192 -16 266 288 196 18 chr2 5360735 5360898 -245326956 + MIR SINE MIR 5 196 -66 846 156 7 0 chr2 5361787 5361928 -245325926 - L1MA8 LINE L1 -5 6286 6145 241 222 19 0 chr2 5362317 5362371 -245325483 + (TAA)n Simple_repeat Simple_repeat 1 55 0 259 274 0 0 chr2 5362457 5362519 -245325335 + MIR SINE MIR 184 245 -17 607 322 0 14 chr2 5362607 5362818 -245325036 - MIR SINE MIR -10 252 45 2232 190 21 73 chr2 5362820 5363668 -245324186 + L1MA9 LINE L1 4813 5630 -682 3944 128 67 38 chr2 5363784 5364474 -245323380 + L1MA9 LINE L1 5603 6312 0 398 364 57 43 chr2 5365502 5365942 -245321912 - L3 LINE CR1 -910 667 222 212 75 0 50 chr2 5366839 5366879 -245320975 + (TCCC)n Simple_repeat Simple_repeat 1 38 0 228 389 0 0 chr2 5369645 5369758 -245318096 + MER58 DNA MER1_type 169 281 -2139 * 293 265 0 0 chr2 5369750 5369818 -245318036 + MER58 DNA MER1_type 2353 2420 0 9526 183 26 2 chr2 5370166 5372721 -245315133 - L1PA13 LINE L1 0 7601 5016 1383 206 0 0 chr2 5372722 5373004 -245314850 - L1P LINE L1 -932 5214 4933 * 8941 238 31 37 chr2 5372994 5378559 -245309295 - L1PA13 LINE L1 -2586 4998 10 2288 90 0 34 chr2 5379006 5379328 -245308526 - AluY SINE Alu 0 311 1 285 328 34 62 chr2 5379723 5379900 -245307954 - HAL1 LINE L1 -2300 207 36 2805 115 0 6 chr2 5379910 5380276 -245307578 - THE1B LTR MaLR 0 364 1 209 308 96 48 chr2 5380611 5380715 -245307139 + MIR SINE MIR 39 147 -61 353 206 16 0 chr2 5381191 5381254 -245306600 + L1MC4 LINE L1 6832 6895 -1147 267 374 32 0 chr2 5381321 5381444 -245306410 + MIR SINE MIR 59 185 -77 180 0 0 0 chr2 5382571 5382591 -245305263 + (CAAAAA)n Simple_repeat Simple_repeat 3 22 0 358 336 141 0 chr2 5383377 5383526 -245304328 - MIR SINE MIR -13 249 80 209 174 0 43 chr2 5384451 5384497 -245303357 + (TTCA)n Simple_repeat Simple_repeat 1 44 0 23 0 0 0 chr2 5384604 5384627 -245303227 + AT_rich Low_complexity Low_complexity 1 23 0 250 391 65 0 chr2 5385288 5385426 -245302428 + L2 LINE L2 3123 3269 -3 765 330 19 4 chr2 5385614 5385872 -245301982 - MIR SINE MIR 0 262 1 253 305 52 45 chr2 5386264 5386418 -245301436 + MIR SINE MIR 66 220 -42 297 250 78 43 chr2 5387174 5387290 -245300564 + MIR3 SINE MIR 35 154 -54 33 56 0 0 chr2 5387560 5387614 -245300240 + AT_rich Low_complexity Low_complexity 1 54 0 228 279 65 58 chr2 5387745 5387899 -245299955 - MER104 DNA Tc2 -1 179 25 755 221 77 10 chr2 5389836 5390031 -245297823 - MER20 DNA MER1_type 0 219 12 185 300 43 0 chr2 5390089 5390159 -245297695 - MIR3 SINE MIR -7 201 129 211 348 63 25 chr2 5390194 5390352 -245297502 + L2 LINE L2 2679 2842 -472 229 367 0 20 chr2 5390458 5390556 -245297298 + L2 LINE L2 3162 3257 -56 2164 172 27 12 chr2 5391279 5391692 -245296162 - MSTB1 LTR MaLR -13 419 1 317 303 0 45 chr2 5391878 5392033 -245295821 + LTR16A1 LTR ERVL 300 447 -10 611 226 40 40 chr2 5392108 5392135 -245295719 - MER45A DNA AcHobo -1403 178 152 1686 179 82 9 chr2 5392135 5392475 -245295379 - MLT1A1 LTR MaLR 0 365 1 611 226 40 40 chr2 5392475 5392624 -245295230 - MER45A DNA AcHobo -1428 153 2 216 302 0 0 chr2 5392869 5392922 -245294932 + L2 LINE L2 3218 3270 -2 604 216 275 0 chr2 5394116 5394352 -245293502 - MLT1F1 LTR MaLR -2 540 240 286 229 16 0 chr2 5394385 5394507 -245293347 + GA-rich Low_complexity Low_complexity 1 124 0 617 175 104 27 chr2 5394536 5394719 -245293135 - MLT1F1 LTR MaLR -370 197 1 21 0 0 0 chr2 5396851 5396872 -245290982 + AT_rich Low_complexity Low_complexity 1 21 0 1643 204 45 60 chr2 5397382 5397852 -245290002 - MLT1C LTR MaLR -1 466 4 632 339 39 9 chr2 5398515 5398745 -245289109 - MIR SINE MIR -4 258 22 1905 104 20 30 chr2 5398745 5399042 -245288812 - AluSq SINE Alu -15 298 5 2141 89 3 78 chr2 5399286 5399669 -245288185 + MER4A LTR ERV1 1 354 -310 476 210 178 19 chr2 5399720 5399877 -245287977 + MER4C LTR ERV1 284 465 0 233 267 227 39 chr2 5399914 5400297 -245287557 - L2 LINE L2 -170 3143 2619 2305 119 117 8 chr2 5400297 5400683 -245287171 - MSTA LTR MaLR 0 428 1 233 267 227 39 chr2 5400683 5400741 -245287113 - L2 LINE L2 -694 2619 2573 608 286 0 19 chr2 5401301 5401462 -245286392 - MIR SINE MIR 0 262 105 475 287 90 27 chr2 5402439 5402662 -245285192 - L2 LINE L2 -3 3310 3074 239 122 122 0 chr2 5402672 5402721 -245285133 - MLT2B3 LTR ERVL 0 453 399 200 108 0 75 chr2 5402725 5402818 -245285036 + (TA)n Simple_repeat Simple_repeat 2 87 0 1812 215 23 64 chr2 5402822 5403363 -245284491 - MLT2B3 LTR ERVL -44 508 1 507 349 20 49 chr2 5403398 5403757 -245284097 - L2 LINE L2 -308 3005 2658 445 210 21 59 chr2 5403955 5404141 -245283713 + L1MB7 LINE L1 2025 2203 -4181 1557 179 58 14 chr2 5404148 5404439 -245283415 + AluJo SINE Alu 1 304 -8 550 86 32 0 chr2 5404450 5404543 -245283311 + GA-rich Low_complexity Low_complexity 1 96 0 373 245 211 0 chr2 5404654 5404963 -245282891 + L1MB7 LINE L1 3125 3507 -2875 311 200 31 0 chr2 5405077 5405142 -245282712 + L1MC4 LINE L1 6637 6703 -1339 192 234 0 0 chr2 5405143 5405190 -245282664 + (TATATG)n Simple_repeat Simple_repeat 4 50 0 347 250 0 22 chr2 5405190 5405282 -245282572 + L1MC4 LINE L1 6614 6703 -1339 246 32 0 0 chr2 5405288 5405319 -245282535 + (GA)n Simple_repeat Simple_repeat 2 32 0 1061 127 20 0 chr2 5405320 5405470 -245282384 - AluSg/x SINE Alu -39 273 121 4260 246 67 19 chr2 5405474 5406474 -245281380 + L1MB7 LINE L1 3789 4900 -1482 1911 126 4 11 chr2 5406474 5406765 -245281089 - AluSx SINE Alu 0 303 15 4260 246 67 19 chr2 5406765 5407405 -245280449 + L1MB7 LINE L1 4900 5508 -874 201 208 21 0 chr2 5407405 5407453 -245280401 + (TA)n Simple_repeat Simple_repeat 1 49 0 2028 210 52 43 chr2 5407526 5408160 -245279694 + L1MB7 LINE L1 5714 6353 -67 1192 253 51 16 chr2 5408255 5408627 -245279227 - MLT1E3 LTR MaLR -93 531 147 1812 62 8 4 chr2 5410164 5410405 -245277449 + L1PA6 LINE L1 5913 6154 0 360 293 69 26 chr2 5412354 5412470 -245275384 + MIR SINE MIR 19 139 -69 183 80 0 0 chr2 5413348 5413373 -245274481 + (TTCA)n Simple_repeat Simple_repeat 1 25 0 1680 94 11 26 chr2 5414441 5414708 -245273146 + L1PA11 LINE L1 5891 6153 -21 1396 227 32 0 chr2 5414728 5415041 -245272813 - MLT1A1 LTR MaLR -42 323 1 1837 179 144 2 chr2 5415620 5416029 -245271825 + MLT1C LTR MaLR 1 467 0 256 330 134 18 chr2 5416608 5416832 -245271022 + MIR SINE MIR 12 261 -1 1823 137 23 0 chr2 5417906 5418205 -245269649 - THE1B LTR MaLR -5 359 54 244 197 30 15 chr2 5418385 5418451 -245269403 + L1PB1 LINE L1 5284 5350 -804 4295 111 16 17 chr2 5418564 5419255 -245268599 + L1PB1 LINE L1 5462 6151 0 558 284 95 46 chr2 5419312 5419639 -245268215 - HAL1b LINE L1 -393 955 613 312 302 28 9 chr2 5419653 5419759 -245268095 - HAL1b LINE L1 -797 551 444 21 71 0 0 chr2 5419820 5419862 -245267992 + AT_rich Low_complexity Low_complexity 1 42 0 509 262 16 49 chr2 5419879 5420123 -245267731 - HAL1b LINE L1 -768 580 345 253 262 0 0 chr2 5420124 5420185 -245267669 + CT-rich Low_complexity Low_complexity 2 62 0 21 36 0 0 chr2 5420285 5420313 -245267541 + AT_rich Low_complexity Low_complexity 1 28 0 469 312 67 19 chr2 5420781 5421107 -245266747 - L1MC/D LINE L1 -748 5398 5118 217 224 0 17 chr2 5421286 5421344 -245266510 + CT-rich Low_complexity Low_complexity 2 58 0 * 264 202 60 0 chr2 5421339 5421423 -245266431 + (TA)n Simple_repeat Simple_repeat 2 90 0 204 263 0 0 chr2 5421554 5421630 -245266224 + (TA)n Simple_repeat Simple_repeat 2 77 0 9615 156 48 10 chr2 5421632 5423425 -245264429 + Tigger2 DNA MER2_type 854 2715 -3 249 167 302 0 chr2 5524556 5524652 -245163202 - L1ME3A LINE L1 0 6170 6046 435 19 0 0 chr2 5524743 5524795 -245163059 + (TG)n Simple_repeat Simple_repeat 2 53 0 247 229 73 9 chr2 5524987 5525096 -245162758 - L1MC/D LINE L1 -1932 4214 4099 2871 232 41 24 chr2 5525105 5526638 -245161216 + L1MB7 LINE L1 4623 6179 -5 382 125 42 0 chr2 5526638 5526710 -245161144 + AluS SINE Alu 1 75 -228 854 188 0 6 chr2 5527505 5527686 -245160168 + (CA)n Simple_repeat Simple_repeat 1 180 0 298 259 54 60 chr2 5529016 5529182 -245158672 - LTR50 LTR ERVL -615 180 16 197 315 96 55 chr2 5529510 5529656 -245158198 - L2 LINE L2 -48 3224 3073 234 81 0 0 chr2 5529738 5529775 -245158079 + (T)n Simple_repeat Simple_repeat 1 37 0 190 328 118 0 chr2 5530196 5530315 -245157539 - MIR3 SINE MIR -43 165 33 2353 103 3 0 chr2 5530937 5531249 -245156605 - AluSq SINE Alu 0 313 1 317 321 128 66 chr2 5531540 5531963 -245155891 + L2 LINE L2 2811 3259 -13 239 191 0 29 chr2 5533785 5533793 -245154061 + (TA)n Simple_repeat Simple_repeat 1 8 -58 2341 149 20 43 chr2 5533793 5534236 -245153618 - Tigger2a DNA MER2_type 0 434 2 239 191 0 29 chr2 5534236 5534282 -245153572 + (TA)n Simple_repeat Simple_repeat 8 55 -11 1668 186 54 9 chr2 5534282 5534615 -245153239 + MER7A DNA MER2_type 1 346 0 239 191 0 29 chr2 5534615 5534627 -245153227 + (TA)n Simple_repeat Simple_repeat 55 66 0 341 253 51 34 chr2 5535317 5535523 -245152331 + L1M4 LINE L1 5218 5426 -744 10900 154 25 11 chr2 5535652 5537658 -245150196 + Tigger1 DNA MER2_type 1 2034 -384 320 102 0 0 chr2 5537743 5537792 -245150062 + Tigger1 DNA MER2_type 2044 2092 -326 441 78 62 0 chr2 5537793 5537857 -245149997 + Alu SINE Alu 222 289 -21 1659 178 34 0 chr2 5537859 5538185 -245149669 + Tigger1 DNA MER2_type 2080 2416 -2 896 235 49 57 chr2 5538513 5539044 -245148810 - L1PBb LINE L1 -4800 1403 781 26 0 0 0 chr2 5540120 5540146 -245147708 + AT_rich Low_complexity Low_complexity 1 26 0 741 167 52 52 chr2 5540700 5540874 -245146980 + MER58A DNA MER1_type 32 205 -19 219 273 80 87 chr2 5541348 5541498 -245146356 - MER5A DNA MER1_type -40 149 1 299 246 56 47 chr2 5543701 5543856 -245143998 + MIR SINE MIR 2 151 -57 2262 117 0 3 chr2 5544999 5545308 -245142546 + AluSc SINE Alu 1 308 -1 2465 55 0 13 chr2 5546273 5546585 -245141269 - AluY SINE Alu -3 308 1 345 135 58 19 chr2 5547069 5547173 -245140681 - Looper DNA T2_type -78 1480 1373 221 30 61 0 chr2 5547173 5547206 -245140648 + T-rich Low_complexity Low_complexity 1 35 0 2625 98 0 10 chr2 5547212 5547601 -245140253 - L1PA8A LINE L1 -28 6103 5719 * 3231 108 15 5 chr2 5547597 5548466 -245139388 + L1PA8A LINE L1 4848 5726 -405 297 0 0 0 chr2 5548466 5548499 -245139355 + (CA)n Simple_repeat Simple_repeat 2 34 0 3231 108 15 5 chr2 5548499 5548517 -245139337 + L1PA8A LINE L1 5726 5742 -389 1174 164 10 0 chr2 5548598 5548806 -245139048 - MER2 DNA MER2_type -134 211 2 631 266 77 10 chr2 5548828 5549125 -245138729 - Looper DNA T2_type -1241 317 1 516 248 51 0 chr2 5550207 5550344 -245137510 + HAL1 LINE L1 51 194 -2313 418 314 63 20 chr2 5550352 5550747 -245137107 + HAL1 LINE L1 1051 1462 -1045 813 270 46 42 chr2 5550867 5551344 -245136510 + HAL1 LINE L1 1902 2380 -127 2292 109 3 0 chr2 5551940 5552252 -245135602 - AluSp SINE Alu 0 313 1 39 50 0 0 chr2 5553269 5553329 -245134525 + AT_rich Low_complexity Low_complexity 1 60 0 23 68 0 0 chr2 5553411 5553455 -245134399 + AT_rich Low_complexity Low_complexity 1 44 0 598 222 6 35 chr2 5553518 5553711 -245134143 - L1 LINE L1 -2369 3777 3590 302 280 16 40 chr2 5554586 5554711 -245133143 - L1ME3A LINE L1 -3 6167 6046 2002 163 7 0 chr2 5554901 5555207 -245132647 - AluSx SINE Alu -4 308 1 4422 154 54 71 chr2 5555568 5556657 -245131197 + MER11C LTR ERVK 1 1071 0 1278 200 71 26 chr2 5557040 5557417 -245130437 - L1MC2 LINE L1 -2 7772 6148 1115 134 41 0 chr2 5557421 5557592 -245130262 - AluSg/x SINE Alu -1 311 134 2256 110 3 0 chr2 5557592 5557884 -245129970 - AluSp SINE Alu -15 298 6 3627 181 63 94 chr2 5557884 5559019 -245128835 - L1MC3 LINE L1 -380 7405 6306 256 325 144 8 chr2 5559319 5559454 -245128400 + MIR SINE MIR 11 159 -57 1520 178 90 26 chr2 5559469 5559812 -245128042 - MLT1A1 LTR MaLR 0 365 1 183 205 0 0 chr2 5561232 5561271 -245126583 + T-rich Low_complexity Low_complexity 1 39 0 854 190 13 0 chr2 5561716 5561874 -245125980 + FRAM SINE Alu 1 160 -6 219 241 35 58 chr2 5562029 5562116 -245125738 + MIR SINE MIR 56 140 -122 235 334 99 60 chr2 5562284 5562637 -245125217 - L2 LINE L2 0 3272 2906 27 29 0 0 chr2 5562922 5562956 -245124898 + AT_rich Low_complexity Low_complexity 1 34 0 251 270 11 45 chr2 5563495 5563673 -245124181 + (CTTAT)n Simple_repeat Simple_repeat 5 176 0 1273 208 0 4 chr2 5564031 5564303 -245123551 + AluJb SINE Alu 42 312 0 735 282 53 18 chr2 5564956 5565183 -245122671 + MIR SINE MIR 15 249 -13 234 305 184 29 chr2 5566085 5566259 -245121595 - MIR SINE MIR -61 201 1 1202 248 103 7 chr2 5567072 5567488 -245120366 - MLT1C LTR MaLR -6 461 6 189 0 0 0 chr2 5567635 5567656 -245120198 + (TGG)n Simple_repeat Simple_repeat 1 21 0 216 111 0 0 chr2 5567671 5567707 -245120147 + (TG)n Simple_repeat Simple_repeat 1 36 0 199 354 101 69 chr2 5568303 5568769 -245119085 + L2 LINE L2 417 897 -2417 484 139 0 0 chr2 5569041 5569113 -245118741 - AluS SINE Alu -13 297 226 29 28 0 0 chr2 5569302 5569338 -245118516 + AT_rich Low_complexity Low_complexity 1 36 0 269 186 14 0 chr2 5569441 5569511 -245118343 + (TATG)n Simple_repeat Simple_repeat 2 72 0 186 269 60 45 chr2 5570275 5570342 -245117512 - L2 LINE L2 0 3313 3246 237 139 0 0 chr2 5570589 5570632 -245117222 + (TA)n Simple_repeat Simple_repeat 2 44 0 225 218 23 23 chr2 5570635 5570722 -245117132 + L1MC4 LINE L1 6614 6700 -1342 310 256 49 0 chr2 5570726 5570808 -245117046 - L1MC4 LINE L1 -1340 6702 6617 307 262 71 0 chr2 5570759 5570843 -245117011 + L1MC4 LINE L1 6614 6703 -1339 * 497 297 95 54 chr2 5571133 5571692 -245116162 - L2 LINE L2 -13 3300 2702 1105 107 0 47 chr2 5571701 5571870 -245115984 - AluSg SINE Alu -30 282 122 201 74 0 0 chr2 5571873 5571900 -245115954 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 1033 92 0 0 chr2 5571902 5572033 -245115821 - AluSg SINE Alu -179 131 1 1181 285 203 65 chr2 5572033 5573637 -245114217 - L2 LINE L2 -599 2715 891 881 289 90 18 chr2 5574619 5575120 -245112734 + L1MCc LINE L1 861 1397 -5026 532 300 73 45 chr2 5575124 5575618 -245112236 + L1MCc LINE L1 1406 1913 -5028 231 282 35 0 chr2 5575667 5575841 -245112013 + L1MCc LINE L1 2814 2993 -4129 336 117 36 108 chr2 5575900 5576011 -245111843 - L1MA9 LINE L1 -2 6310 6208 * 871 160 46 16 chr2 5576007 5576154 -245111700 + L1MA9 LINE L1 5632 5788 -524 204 40 0 0 chr2 5576154 5576179 -245111675 + (TG)n Simple_repeat Simple_repeat 2 26 0 871 160 46 16 chr2 5576179 5576225 -245111629 + L1MA9 LINE L1 5788 5831 -481 757 152 25 7 chr2 5576227 5576390 -245111464 + L1MA9 LINE L1 5775 5946 -243 3670 197 92 42 chr2 5576519 5576794 -245111060 + L1MC3 LINE L1 6591 6851 -934 189 0 0 0 chr2 5576794 5576815 -245111039 + (CA)n Simple_repeat Simple_repeat 1 21 0 3670 197 92 42 chr2 5576815 5576836 -245111018 + L1MC3 LINE L1 6851 6869 -916 3169 148 25 17 chr2 5576836 5577358 -245110496 + MER1A DNA MER1_type 2 527 0 3670 197 92 42 chr2 5577358 5578198 -245109656 + L1MC3 LINE L1 6869 7785 0 1667 260 59 47 chr2 5578217 5579261 -245108593 + L1MCc LINE L1 3167 4223 -2718 316 360 39 39 chr2 5579989 5580247 -245107607 + L2 LINE L2 2826 3083 -189 2488 64 0 0 chr2 5580551 5580849 -245107005 - AluY SINE Alu -13 298 1 25 0 0 0 chr2 5580949 5580974 -245106880 + AT_rich Low_complexity Low_complexity 1 25 0 810 330 216 19 chr2 5581020 5581315 -245106539 + L2 LINE L2 555 791 -2523 541 195 81 0 chr2 5581315 5581438 -245106416 - FLAM_A SINE Alu 0 133 1 810 330 216 19 chr2 5581438 5582590 -245105264 + L2 LINE L2 791 2287 -1027 392 335 90 75 chr2 5582817 5583273 -245104581 + L2 LINE L2 2851 3313 0 193 200 30 140 chr2 5583446 5583546 -245104308 - L2 LINE L2 -190 3082 2994 260 235 20 10 chr2 5583739 5583781 -245104073 + (TA)n Simple_repeat Simple_repeat 2 42 -58 2244 116 0 3 chr2 5583781 5584091 -245103763 + AluSg SINE Alu 1 309 -1 260 235 20 10 chr2 5584091 5584146 -245103708 + (TA)n Simple_repeat Simple_repeat 42 100 0 329 336 50 0 chr2 5585067 5585186 -245102668 - MIR3 SINE MIR -35 173 49 267 327 65 42 chr2 5585441 5585609 -245102245 + MER5A DNA MER1_type 17 188 -1 2253 104 3 0 chr2 5585811 5586108 -245101746 - AluSx SINE Alu -14 298 1 21 36 0 0 chr2 5586171 5586199 -245101655 + AT_rich Low_complexity Low_complexity 1 28 0 677 186 30 9 chr2 5587200 5587538 -245100316 + CT-rich Low_complexity Low_complexity 1 345 0 342 224 14 46 chr2 5587555 5587910 -245099944 + CT-rich Low_complexity Low_complexity 1 343 0 2288 109 3 0 chr2 5588664 5588976 -245098878 + AluSp SINE Alu 1 313 0 500 160 15 15 chr2 5590295 5590426 -245097428 + GA-rich Low_complexity Low_complexity 1 131 0 317 319 17 9 chr2 5590520 5590636 -245097218 + MIR3 SINE MIR 74 190 -18 967 263 134 26 chr2 5591184 5591534 -245096320 + MLT1B LTR MaLR 3 390 0 1545 123 53 53 chr2 5592587 5592905 -245094949 - THE1C LTR MaLR -57 318 1 28 29 0 0 chr2 5592945 5592980 -245094874 + AT_rich Low_complexity Low_complexity 1 35 0 197 139 23 0 chr2 5592980 5593023 -245094831 + (CATATA)n Simple_repeat Simple_repeat 3 46 0 199 339 80 9 chr2 5594316 5594428 -245093426 + MIR SINE MIR 21 140 -68 190 356 67 34 chr2 5594585 5594734 -245093120 - MIR SINE MIR -95 167 14 242 330 11 0 chr2 5595326 5595417 -245092437 + MLT1I LTR MaLR 72 163 -246 217 280 60 40 chr2 5596482 5596582 -245091272 + MIR SINE MIR 20 121 -141 249 361 69 0 chr2 5596643 5596773 -245091081 - L2 LINE L2 0 3313 3175 238 261 0 0 chr2 5596785 5596831 -245091023 + L2 LINE L2 3209 3254 -18 223 221 174 0 chr2 5597254 5597340 -245090514 - MIR SINE MIR -71 191 91 288 324 15 7 chr2 5597391 5597527 -245090327 - LTR67 LTR ERVL -27 530 394 285 278 11 33 chr2 5599042 5599132 -245088722 + L2 LINE L2 3220 3307 -6 367 308 159 0 chr2 5599799 5599994 -245087860 - MIR SINE MIR -26 236 11 194 316 71 10 chr2 5600890 5600988 -245086866 - MIR SINE MIR -55 153 50 238 344 0 0 chr2 5601202 5601266 -245086588 + MIR SINE MIR 83 146 -62 1565 182 100 9 chr2 5601274 5601603 -245086251 - MLT1A1 LTR MaLR -6 359 1 1185 219 149 10 chr2 5601639 5601940 -245085914 - MER2 DNA MER2_type -1 343 1 21 0 0 0 chr2 5603313 5603334 -245084520 + AT_rich Low_complexity Low_complexity 1 21 0 291 266 21 0 chr2 5603350 5603444 -245084410 + MER3 DNA MER1_type 1 96 -113 1525 246 47 30 chr2 5603450 5603917 -245083937 + L1MA9 LINE L1 5798 6272 -40 300 240 52 10 chr2 5603925 5604021 -245083833 + MER3 DNA MER1_type 99 198 -11 3624 152 0 26 chr2 5604154 5604695 -245083159 + MER1A DNA MER1_type 1 527 0 234 318 106 20 chr2 5604720 5604965 -245082889 + HAL1b LINE L1 306 571 -777 231 226 70 26 chr2 5605027 5605142 -245082712 + HAL1b LINE L1 678 797 -551 30 59 0 0 chr2 5605455 5605506 -245082348 + AT_rich Low_complexity Low_complexity 1 51 0 23 54 0 0 chr2 5605513 5605550 -245082304 + AT_rich Low_complexity Low_complexity 1 37 0 1732 133 42 52 chr2 5606256 5606565 -245081289 + AluSx SINE Alu 1 306 -6 1727 199 21 57 chr2 5606627 5606820 -245081034 + MLT1A2 LTR MaLR 1 175 -199 357 43 0 0 chr2 5606820 5606867 -245080987 + (TC)n Simple_repeat Simple_repeat 2 48 0 1727 199 21 57 chr2 5606867 5607061 -245080793 + MLT1A2 LTR MaLR 175 374 0 306 362 54 0 chr2 5607078 5607227 -245080627 + L1MC4a LINE L1 4736 4892 -1254 1144 312 62 18 chr2 5607621 5608278 -245079576 + L1MC4a LINE L1 5256 5941 -1867 24 32 0 0 chr2 5608470 5608501 -245079353 + AT_rich Low_complexity Low_complexity 1 31 0 229 359 26 0 chr2 5608779 5608857 -245078997 + MIR SINE MIR 2 81 -181 389 261 7 0 chr2 5609902 5610055 -245077799 + (TG)n Simple_repeat Simple_repeat 2 155 0 1828 125 53 11 chr2 5610244 5610525 -245077329 + AluSx SINE Alu 1 293 -19 225 0 0 0 chr2 5610608 5610633 -245077221 + (TC)n Simple_repeat Simple_repeat 2 26 0 184 306 83 9 chr2 5611043 5611151 -245076703 + MIR SINE MIR 23 138 -124 397 282 75 27 chr2 5611178 5611379 -245076475 - MIR SINE MIR -27 235 25 182 239 22 0 chr2 5611553 5611599 -245076255 - L3b LINE CR1 -9 1574 1528 375 343 66 24 chr2 5611924 5612137 -245075717 - MIR SINE MIR -32 230 9 528 122 8 98 chr2 5612335 5612458 -245075396 - L1PB2 LINE L1 -4 6147 6036 296 290 90 80 chr2 5612576 5612732 -245075122 - MIR SINE MIR -2 260 100 1344 202 10 50 chr2 5612732 5613073 -245074781 + AluJb SINE Alu 1 312 0 296 290 90 80 chr2 5613073 5613116 -245074738 - MIR SINE MIR -162 100 59 3822 157 11 5 chr2 5613350 5613962 -245073892 - L1PA15 LINE L1 -2 6163 5548 28 0 0 0 chr2 5614001 5614029 -245073825 + AT_rich Low_complexity Low_complexity 1 28 0 1852 145 78 31 chr2 5615364 5615722 -245072132 + THE1C LTR MaLR 1 375 0 8726 127 115 3 chr2 5615724 5617138 -245070716 + THE1C-int LTR MaLR 3 1575 -5 1772 152 45 73 chr2 5617147 5617529 -245070325 + THE1C LTR MaLR 5 375 0 311 328 101 0 chr2 5617913 5618032 -245069822 - L2 LINE L2 -7 3306 3176 1507 189 10 34 chr2 5618070 5618366 -245069488 - AluJo SINE Alu -23 289 1 500 240 0 0 chr2 5619689 5619789 -245068065 + MER63 DNA MER1_type 27 752 -84 335 241 25 0 chr2 5619790 5619869 -245067985 + MER63 DNA MER1_type 980 1060 -2 481 270 16 0 chr2 5620471 5620597 -245067257 - L3b LINE CR1 -331 1252 1125 217 344 56 38 chr2 5620787 5620834 -245067020 - MIR3 SINE MIR -7 201 156 2504 67 0 3 chr2 5620834 5621146 -245066708 + AluY SINE Alu 1 311 0 217 344 56 38 chr2 5621146 5621258 -245066596 - MIR3 SINE MIR -52 156 39 186 280 54 21 chr2 5621384 5621477 -245066377 + L2 LINE L2 3206 3301 -12 236 62 0 0 chr2 5623985 5624017 -245063837 + HSMAR1 DNA Mariner 3 34 -1253 2294 95 0 20 chr2 5624188 5624493 -245063361 - AluSg SINE Alu -7 303 5 219 88 0 0 chr2 5626007 5626041 -245061813 + (GA)n Simple_repeat Simple_repeat 1 34 0 586 299 88 75 chr2 5626138 5626580 -245061274 + MLT1J2 LTR MaLR 1 448 -2 520 288 73 10 chr2 5626737 5626942 -245060912 - MIR SINE MIR -37 225 8 757 148 26 9 chr2 5627343 5627458 -245060396 + FLAM_C SINE Alu 12 128 -15 205 364 156 0 chr2 5627921 5628075 -245059779 - MIR SINE MIR -12 250 73 303 313 56 17 chr2 5628541 5628720 -245059134 + MIR SINE MIR 54 239 -23 33 43 0 0 chr2 5630812 5630859 -245056995 + AT_rich Low_complexity Low_complexity 1 47 0 2651 149 2 7 chr2 5632382 5632789 -245055065 + MSTA LTR MaLR 1 405 -23 1486 121 36 9 chr2 5632789 5633013 -245054841 - MER30 DNA MER1_type 0 230 1 224 227 0 0 chr2 5633044 5633088 -245054766 + (CATA)n Simple_repeat Simple_repeat 1 44 0 302 298 36 79 chr2 5633979 5634071 -245053783 - L1M4 LINE L1 -3775 2371 2277 2308 104 7 0 chr2 5634071 5634369 -245053485 - AluSp SINE Alu -13 300 1 302 298 36 79 chr2 5634369 5634528 -245053326 - L1M4 LINE L1 -3869 2277 2131 287 164 16 0 chr2 5635021 5635082 -245052772 + (TA)n Simple_repeat Simple_repeat 1 62 0 203 369 8 8 chr2 5638685 5638807 -245049047 + (TG)n Simple_repeat Simple_repeat 1 122 0 302 347 52 6 chr2 5639164 5639337 -245048517 + MIR3 SINE MIR 5 185 -23 516 186 12 0 chr2 5640326 5640412 -245047442 - FLAM_C SINE Alu -36 107 21 344 204 54 21 chr2 5640531 5640624 -245047230 - Charlie7 DNA MER1_type -2455 157 62 2204 109 6 13 chr2 5640810 5640943 -245046911 + AluSg SINE Alu 1 133 -177 2151 104 0 13 chr2 5640943 5641278 -245046576 + AluSx SINE Alu 3 312 0 2204 109 6 13 chr2 5641278 5641455 -245046399 + AluSg SINE Alu 133 309 -1 3109 123 12 6 chr2 5641576 5642057 -245045797 - L1PA13 LINE L1 -415 5746 5263 2736 125 39 2 chr2 5642057 5642453 -245045401 + L1PA13 LINE L1 5739 6160 -3 467 236 51 97 chr2 5642518 5642713 -245045141 - MIR SINE MIR -10 252 67 358 309 86 6 chr2 5643338 5643513 -245044341 + MIR SINE MIR 49 237 -25 185 163 0 82 chr2 5643903 5643952 -245043902 - L3b LINE CR1 -13 1570 1526 1718 212 57 5 chr2 5644091 5644459 -245043395 + MLT1B LTR MaLR 3 389 -1 185 323 83 53 chr2 5645016 5645149 -245042705 + MIR SINE MIR 117 253 -9 511 278 88 32 chr2 5646611 5646827 -245041027 - MIR SINE MIR -21 241 14 205 313 101 10 chr2 5647123 5647222 -245040632 + MIR SINE MIR 40 147 -115 242 379 0 0 chr2 5647367 5647462 -245040392 + MLT1G1 LTR MaLR 431 525 -70 1288 198 62 35 chr2 5647463 5647574 -245040280 + AluJo SINE Alu 4 110 -202 2261 134 19 43 chr2 5647574 5647947 -245039907 - THE1B LTR MaLR 0 364 1 1288 198 62 35 chr2 5647947 5648123 -245039731 + AluJo SINE Alu 110 299 -13 2156 117 19 3 chr2 5648403 5648728 -245039126 - Tigger3b DNA MER2_type -564 667 338 233 87 0 0 chr2 5648743 5648789 -245039065 - LTR66 LTR ERVL -171 439 394 239 211 9 28 chr2 5648797 5648906 -245038948 + (TA)n Simple_repeat Simple_repeat 2 108 0 565 158 0 10 chr2 5648906 5649007 -245038847 - Tigger3b DNA MER2_type -902 329 230 3069 196 59 6 chr2 5649907 5650570 -245037284 - L1MC2 LINE L1 0 6344 5647 21 0 0 0 chr2 5650668 5650689 -245037165 + AT_rich Low_complexity Low_complexity 1 21 0 710 191 111 5 chr2 5651220 5651409 -245036445 + L1MD3 LINE L1 6906 7114 -881 607 235 96 24 chr2 5651414 5651580 -245036274 + MER45A DNA AcHobo 1 178 0 376 323 16 8 chr2 5651592 5651719 -245036135 - MER5A DNA MER1_type -51 138 11 413 309 74 67 chr2 5652069 5652490 -245035364 + L1MEc LINE L1 2099 2500 -3715 1769 181 0 0 chr2 5652490 5652796 -245035058 + AluSx SINE Alu 1 306 0 413 309 74 67 chr2 5652796 5652965 -245034889 + L1MEc LINE L1 2500 2666 -3549 2442 125 43 14 chr2 5654238 5654590 -245033264 - THE1B LTR MaLR 0 364 3 12286 100 11 0 chr2 5654592 5656154 -245031700 - THE1B-int LTR MaLR 0 1580 2 2481 137 31 14 chr2 5656155 5656513 -245031341 - THE1B LTR MaLR 0 364 1 22 56 0 0 chr2 5656519 5656555 -245031299 + AT_rich Low_complexity Low_complexity 1 36 0 1897 146 13 23 chr2 5658518 5658820 -245029034 - AluJo SINE Alu -13 299 1 1981 139 4 0 chr2 5658866 5659186 -245028668 + AluSx SINE Alu 1 321 0 234 116 0 0 chr2 5661519 5661562 -245026292 + (T)n Simple_repeat Simple_repeat 1 43 0 323 275 44 0 chr2 5661861 5661952 -245025902 - MIR SINE MIR -62 146 52 317 301 82 35 chr2 5662179 5662495 -245025359 + L1ME LINE L1 5352 5682 -439 467 295 45 54 chr2 5662609 5662833 -245025021 + MIR SINE MIR 14 235 -27 235 188 104 0 chr2 5663266 5663314 -245024540 + L2 LINE L2 3256 3308 -5 1754 182 3 0 chr2 5663336 5663627 -245024227 + AluJb SINE Alu 12 303 -9 5029 68 0 0 chr2 5663753 5664343 -245023511 + LTR10C LTR ERV1 1 590 -1 1767 132 81 45 chr2 5664557 5664914 -245022940 - THE1C LTR MaLR 0 375 6 2080 120 3 30 chr2 5665443 5665742 -245022112 + AluSx SINE Alu 1 291 -21 10114 245 26 29 chr2 5666795 5666976 -245020878 + L1PA16 LINE L1 1983 2163 -4686 2037 151 3 0 chr2 5666976 5667288 -245020566 + AluSp SINE Alu 1 313 0 10114 245 26 29 chr2 5667288 5668742 -245019112 + L1PA16 LINE L1 2163 3620 -3229 2146 100 10 32 chr2 5668742 5669052 -245018802 + AluSq SINE Alu 1 303 -10 10114 245 26 29 chr2 5669052 5669768 -245018086 + L1PA16 LINE L1 3620 4337 -2512 261 0 0 0 chr2 5669768 5669797 -245018057 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 10114 245 26 29 chr2 5669797 5671608 -245016246 + L1PA16 LINE L1 4337 6033 -816 404 167 14 14 chr2 5671608 5671680 -245016174 + AluJ/FRAM SINE Alu 217 288 -24 23 0 0 0 chr2 5671680 5671703 -245016151 + AT_rich Low_complexity Low_complexity 1 23 0 2560 156 53 3 chr2 5671704 5672441 -245015413 + L1PA16 LINE L1 6025 6849 -20 22 70 0 0 chr2 5672664 5672707 -245015147 + AT_rich Low_complexity Low_complexity 1 43 0 300 346 88 16 chr2 5673926 5674108 -245013746 + L2 LINE L2 3078 3272 0 227 227 0 0 chr2 5674885 5674929 -245012925 - L3 LINE CR1 -7 1570 1527 2232 109 3 0 chr2 5675134 5675427 -245012427 - AluSg SINE Alu -16 294 1 243 281 92 59 chr2 5675467 5675620 -245012234 - MIR3 SINE MIR -48 160 3 626 276 119 16 chr2 5675678 5675921 -245011933 + MLT1J LTR MaLR 1 268 -243 339 65 0 0 chr2 5676100 5676146 -245011708 + (TTTTA)n Simple_repeat Simple_repeat 1 46 0 27671 82 8 5 chr2 5676146 5680733 -245007121 - L1PA6 LINE L1 -24 6130 1532 35016 85 4 12 chr2 5680867 5685794 -245002060 - L1P2 LINE L1 -683 5471 591 1437 228 83 41 chr2 5686034 5686469 -245001385 + MLT1C LTR MaLR 8 460 -7 2054 168 90 30 chr2 5686796 5687196 -245000658 - MSTA LTR MaLR -4 424 1 319 253 183 84 chr2 5687593 5687795 -245000059 + MLT1J LTR MaLR 129 350 -161 3416 66 49 5 chr2 5688058 5688483 -244999371 - MLT2A1 LTR ERVL 0 444 1 266 309 57 16 chr2 5688683 5688877 -244998977 + L1ME4a LINE L1 5714 5915 -206 1873 102 4 8 chr2 5688888 5689144 -244998710 - AluSp SINE Alu -19 294 40 373 246 58 108 chr2 5689637 5689962 -244997892 + MER5C DNA MER1_type 14 322 -2 240 293 198 17 chr2 5691286 5691402 -244996452 - MIR SINE MIR -75 187 51 319 329 89 25 chr2 5691796 5692200 -244995654 - LTR16A LTR ERVL -13 437 8 1169 108 104 68 chr2 5692614 5692699 -244995155 - MER30 DNA MER1_type 0 230 150 2117 125 3 3 chr2 5692699 5692995 -244994859 - AluSc SINE Alu -13 296 1 1169 108 104 68 chr2 5692995 5693131 -244994723 - MER30 DNA MER1_type -80 150 1 184 328 33 0 chr2 5694192 5694253 -244993601 - L2 LINE L2 0 3272 3210 196 372 36 15 chr2 5695004 5695141 -244992713 - MIR SINE MIR -85 177 38 519 289 17 6 chr2 5695378 5695551 -244992303 - MER5B DNA MER1_type -1 177 3 220 283 17 17 chr2 5695602 5695662 -244992192 - MER5A DNA MER1_type -16 173 114 482 369 45 61 chr2 5695913 5696385 -244991469 - L2 LINE L2 -1809 1505 1042 316 265 27 13 chr2 5696477 5696615 -244991239 + MLT1I LTR MaLR 73 181 -228 890 269 88 7 chr2 5697472 5697588 -244990266 + MLT1A2 LTR MaLR 42 147 -227 252 0 0 0 chr2 5697588 5697616 -244990238 + (TG)n Simple_repeat Simple_repeat 1 28 0 890 269 88 7 chr2 5697616 5697807 -244990047 + MLT1A2 LTR MaLR 147 374 0 218 114 0 23 chr2 5698709 5698753 -244989101 + (TC)n Simple_repeat Simple_repeat 2 44 0 198 0 0 0 chr2 5698753 5698775 -244989079 + (CA)n Simple_repeat Simple_repeat 1 22 0 393 264 155 29 chr2 5699849 5700050 -244987804 + MIR SINE MIR 3 213 -49 195 42 0 0 chr2 5700083 5700107 -244987747 + (TCTG)n Simple_repeat Simple_repeat 3 26 0 801 31 0 0 chr2 5700108 5700204 -244987650 + (TCTA)n Simple_repeat Simple_repeat 4 99 0 302 67 22 0 chr2 5700493 5700538 -244987316 + (TCTA)n Simple_repeat Simple_repeat 1 46 0 202 367 93 4 chr2 5700565 5700843 -244987011 + L3 LINE CR1 1128 1430 -147 438 318 42 42 chr2 5703120 5703356 -244984498 + MIR SINE MIR 21 256 -6 1320 88 0 0 chr2 5703718 5703888 -244983966 + AluY SINE Alu 126 295 -16 187 296 74 0 chr2 5704890 5704944 -244982910 - MER5B DNA MER1_type 0 178 121 38 22 0 0 chr2 5705387 5705432 -244982422 + AT_rich Low_complexity Low_complexity 1 45 0 2254 118 0 0 chr2 5705432 5705736 -244982118 + AluSc SINE Alu 3 306 -3 234 292 119 64 chr2 5706344 5706563 -244981291 + MIR SINE MIR 13 243 -19 793 219 39 0 chr2 5706835 5707040 -244980814 + L1MD2 LINE L1 5656 5868 -491 2299 95 0 0 chr2 5707984 5708290 -244979564 + AluY SINE Alu 1 306 -5 2079 90 62 3 chr2 5708326 5708615 -244979239 + AluSq SINE Alu 1 306 -7 394 274 15 22 chr2 5710158 5710293 -244977561 - MER94 DNA DNA 0 134 1 451 235 76 0 chr2 5710551 5710683 -244977171 - MER63 DNA MER1_type -276 786 19 12131 162 56 9 chr2 5711440 5713749 -244974105 - Tigger1 DNA MER2_type 0 2418 3 366 309 53 33 chr2 5713800 5714073 -244973781 - L1ME2 LINE L1 -4 6162 5879 1368 263 85 48 chr2 5714176 5714500 -244973354 - L1ME2 LINE L1 -277 5889 5578 2103 94 10 39 chr2 5714500 5714807 -244973047 - AluSg SINE Alu -11 299 2 1368 263 85 48 chr2 5714807 5716197 -244971657 - L1ME2 LINE L1 -588 5578 4124 26 0 0 0 chr2 5716215 5716241 -244971613 + AT_rich Low_complexity Low_complexity 1 26 0 293 274 105 0 chr2 5716241 5716365 -244971489 - L1ME2 LINE L1 -2210 3936 3800 22 70 0 0 chr2 5716394 5716437 -244971417 + AT_rich Low_complexity Low_complexity 1 43 0 29 60 0 0 chr2 5716842 5716892 -244970962 + AT_rich Low_complexity Low_complexity 1 50 0 442 177 14 34 chr2 5717489 5717636 -244970218 + CT-rich Low_complexity Low_complexity 1 144 0 820 126 6 27 chr2 5717636 5717819 -244970035 + (TTTC)n Simple_repeat Simple_repeat 1 179 0 296 297 7 83 chr2 5718316 5718461 -244969393 + MIR SINE MIR 47 180 -82 408 348 45 8 chr2 5718534 5718781 -244969073 + LTR16A LTR ERVL 56 311 -139 237 65 0 0 chr2 5718786 5718817 -244969037 + (CTTG)n Simple_repeat Simple_repeat 2 32 0 1768 147 53 3 chr2 5718820 5719105 -244968749 - AluSx SINE Alu -13 299 1 212 186 17 0 chr2 5720111 5720170 -244967684 + CT-rich Low_complexity Low_complexity 1 60 0 2184 132 6 0 chr2 5720593 5720904 -244966950 + AluSq SINE Alu 1 313 0 979 232 31 37 chr2 5721322 5721649 -244966205 - L1MB8 LINE L1 0 6178 5854 184 360 0 0 chr2 5722298 5722348 -244965506 + L2 LINE L2 3206 3255 -17 501 135 0 0 chr2 5722351 5722440 -244965414 + (GGAA)n Simple_repeat Simple_repeat 4 92 0 210 139 0 70 chr2 5722440 5722483 -244965371 + (GGGGA)n Simple_repeat Simple_repeat 5 44 0 186 208 0 0 chr2 5723045 5723093 -244964761 + (TA)n Simple_repeat Simple_repeat 1 48 0 189 234 31 62 chr2 5724021 5724085 -244963769 - L2 LINE L2 -11 3302 3241 444 330 62 20 chr2 5724122 5724339 -244963515 - MIR SINE MIR -1 261 37 3808 79 119 0 chr2 5726208 5726361 -244961493 - LTR66 LTR ERVL 0 610 477 327 113 0 0 chr2 5726361 5726423 -244961431 + (TA)n Simple_repeat Simple_repeat 2 63 0 3808 79 119 0 chr2 5726423 5726814 -244961040 - LTR66 LTR ERVL -133 477 1 27 0 0 0 chr2 5727655 5727682 -244960172 + AT_rich Low_complexity Low_complexity 1 27 0 226 294 43 22 chr2 5728021 5728113 -244959741 - MIR3 SINE MIR -6 202 109 27 29 0 0 chr2 5728476 5728510 -244959344 + AT_rich Low_complexity Low_complexity 1 34 0 1922 147 0 0 chr2 5729064 5729349 -244958505 + AluSg SINE Alu 1 285 -25 355 224 129 20 chr2 5729398 5729545 -244958309 + L1MDb LINE L1 1178 1340 -5069 5575 168 24 45 chr2 5731220 5732474 -244955380 - Tigger3b DNA MER2_type -3 1228 1 402 306 80 55 chr2 5733543 5733941 -244953913 + L2 LINE L2 1901 2308 -1006 895 229 89 50 chr2 5734287 5734645 -244953209 - MLT1A2 LTR MaLR -2 372 1 731 196 7 0 chr2 5735871 5736009 -244951845 - AluJb SINE Alu 0 312 174 2449 231 63 13 chr2 5736136 5736657 -244951197 - L1MB7 LINE L1 -101 6083 5590 2425 71 0 10 chr2 5736657 5736968 -244950886 - AluY SINE Alu -3 308 1 2449 231 63 13 chr2 5736968 5737695 -244950159 - L1MB7 LINE L1 -594 5590 4786 710 207 27 0 chr2 5737695 5737845 -244950009 - MLT1A1 LTR MaLR 0 365 212 1279 173 38 114 chr2 5738028 5738254 -244949600 + MLT1B LTR MaLR 1 182 -208 2060 139 0 3 chr2 5738254 5738557 -244949297 + AluSx SINE Alu 2 303 -9 1279 173 38 114 chr2 5738557 5738752 -244949102 + MLT1B LTR MaLR 182 390 0 713 179 20 4 chr2 5739271 5739527 -244948327 + (TG)n Simple_repeat Simple_repeat 1 260 0 2053 103 33 98 chr2 5742195 5742271 -244945583 - THE1B LTR MaLR 0 364 285 2075 127 14 0 chr2 5742271 5742562 -244945292 - AluSx SINE Alu -17 295 1 2053 103 33 98 chr2 5742562 5742874 -244944980 - THE1B LTR MaLR -79 285 1 265 286 53 85 chr2 5742967 5743134 -244944720 - MIR SINE MIR -27 235 73 1411 189 103 49 chr2 5743134 5743504 -244944350 - MLT1B LTR MaLR 0 390 1 265 286 53 85 chr2 5743504 5743525 -244944329 - MIR SINE MIR -189 73 53 213 298 53 0 chr2 5743738 5743795 -244944059 + MIR SINE MIR 1 60 -202 338 217 0 0 chr2 5743843 5743912 -244943942 - L2 LINE L2 -3 3310 3242 303 28 0 0 chr2 5745010 5745046 -244942808 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 2567 50 0 0 chr2 5745049 5745350 -244942504 - AluY SINE Alu -10 301 1 697 150 36 7 chr2 5746270 5746410 -244941444 + L1PA15 LINE L1 6021 6164 -1 341 282 103 5 chr2 5746453 5746666 -244941188 + HAL1b LINE L1 260 493 -855 227 276 20 0 chr2 5746844 5746942 -244940912 + (TA)n Simple_repeat Simple_repeat 2 101 0 258 32 0 0 chr2 5746990 5747021 -244940833 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2165 100 11 0 chr2 5747023 5747302 -244940552 - AluSq SINE Alu -28 285 4 1863 182 42 25 chr2 5747347 5747697 -244940157 - L1PB4 LINE L1 0 6156 5796 234 62 0 0 chr2 5747697 5747729 -244940125 + (TG)n Simple_repeat Simple_repeat 2 33 0 1863 182 42 25 chr2 5747729 5747811 -244940043 - L1PB4 LINE L1 -360 5796 5717 225 65 0 0 chr2 5748520 5748551 -244939303 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 2223 116 0 7 chr2 5748620 5748930 -244938924 + AluSq SINE Alu 1 308 -5 259 337 37 37 chr2 5749225 5749412 -244938442 + MIR SINE MIR 71 257 -5 651 236 21 82 chr2 5751503 5751736 -244936118 + MLT1A1 LTR MaLR 1 219 -146 242 248 31 39 chr2 5753524 5753653 -244934201 - L1ME LINE L1 -202 5919 5792 231 88 0 0 chr2 5753674 5753708 -244934146 + (TG)n Simple_repeat Simple_repeat 2 35 0 531 299 55 10 chr2 5754188 5754397 -244933457 - MIR SINE MIR -29 233 17 383 37 0 19 chr2 5754614 5754668 -244933186 + (TG)n Simple_repeat Simple_repeat 2 54 0 2239 96 33 7 chr2 5755760 5756062 -244931792 + AluSg SINE Alu 1 310 0 254 231 0 0 chr2 5756208 5756273 -244931581 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 1682 166 39 34 chr2 5756420 5756776 -244931078 - MLT1A1 LTR MaLR -7 358 1 793 176 0 0 chr2 5756777 5756925 -244930929 - L1MB1 LINE L1 -17 6151 6004 411 183 0 0 chr2 5756988 5757070 -244930784 + AluJ/FRAM SINE Alu 222 303 -9 199 383 8 39 chr2 5757368 5757496 -244930358 + L2 LINE L2 3148 3271 -1 744 171 8 0 chr2 5758424 5758547 -244929307 + FLAM_C SINE Alu 2 125 -8 274 371 61 0 chr2 5758699 5758831 -244929023 + MIR SINE MIR 53 192 -70 231 170 0 0 chr2 5758902 5758949 -244928905 + (TG)n Simple_repeat Simple_repeat 1 47 0 467 308 48 14 chr2 5759376 5759522 -244928332 + MER5B DNA MER1_type 28 178 0 193 296 14 28 chr2 5759599 5759670 -244928184 + L2 LINE L2 3194 3263 -9 1143 281 132 14 chr2 5760065 5760582 -244927272 - L2 LINE L2 -575 2739 2162 401 283 121 38 chr2 5761300 5761646 -244926208 + LTR16A1 LTR ERVL 71 445 -12 2270 108 7 0 chr2 5761796 5762103 -244925751 + AluSg SINE Alu 1 309 -1 1768 177 29 13 chr2 5762897 5763280 -244924574 + MLT2B1 LTR ERVL 2 436 -79 184 57 29 29 chr2 5763287 5763322 -244924532 + (TTATA)n Simple_repeat Simple_repeat 5 39 0 21 71 0 0 chr2 5763754 5763796 -244924058 + AT_rich Low_complexity Low_complexity 1 42 0 268 385 39 26 chr2 5765686 5765842 -244922012 + MIR SINE MIR 15 172 -90 2238 169 26 28 chr2 5767029 5767456 -244920398 + MSTB LTR MaLR 1 426 0 1093 232 14 21 chr2 5767526 5767806 -244920048 + MLT1A1 LTR MaLR 1 278 -87 2314 106 0 0 chr2 5767932 5768234 -244919620 + AluSx SINE Alu 1 302 -10 461 268 176 0 chr2 5768245 5768387 -244919467 - MER96 DNA MER1_type? -1 174 8 508 296 36 13 chr2 5768760 5769067 -244918787 + L1M4 LINE L1 3387 3700 -2446 235 138 0 52 chr2 5769082 5769140 -244918714 + (TA)n Simple_repeat Simple_repeat 2 56 0 560 247 71 61 chr2 5769149 5769445 -244918409 + L1M4 LINE L1 3719 4017 -2129 1721 161 32 7 chr2 5769541 5769844 -244918010 - AluJb SINE Alu 0 310 1 1684 242 138 9 chr2 5769961 5770656 -244917198 + L1M4 LINE L1 4493 5277 -869 6208 186 17 5 chr2 5770664 5772494 -244915360 + L1P5 LINE L1 3823 5679 -472 275 257 67 0 chr2 5772789 5772894 -244914960 + MARNA DNA Mariner 461 572 -14 23 68 0 0 chr2 5773484 5773528 -244914326 + AT_rich Low_complexity Low_complexity 1 44 0 23 33 0 0 chr2 5773992 5774022 -244913832 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr2 5774143 5774171 -244913683 + AT_rich Low_complexity Low_complexity 1 28 0 223 306 61 20 chr2 5774391 5774489 -244913365 - MIR SINE MIR -95 167 66 258 400 40 0 chr2 5776104 5776229 -244911625 - L2 LINE L2 -237 3035 2906 1270 187 239 16 chr2 5776293 5776673 -244911181 - MER31B LTR ERV1 -1 465 1 181 281 73 31 chr2 5776699 5776795 -244911059 - L2 LINE L2 -480 2834 2735 366 332 75 11 chr2 5777540 5777727 -244910127 + MIR SINE MIR 53 251 -11 212 175 25 0 chr2 5778550 5778590 -244909264 + CT-rich Low_complexity Low_complexity 1 41 0 210 208 75 0 chr2 5779310 5779363 -244908491 - MIR SINE MIR -142 120 64 194 333 25 37 chr2 5779399 5779480 -244908374 + MIR SINE MIR 63 142 -120 3779 113 53 14 chr2 5779712 5779939 -244907915 - L1MA3 LINE L1 0 6305 6088 269 68 23 0 chr2 5779939 5779983 -244907871 + (GTTTG)n Simple_repeat Simple_repeat 2 46 0 3779 113 53 14 chr2 5779983 5780393 -244907461 - L1MA3 LINE L1 -217 6088 5643 255 217 0 0 chr2 5780393 5780453 -244907401 + (CATATA)n Simple_repeat Simple_repeat 3 62 0 787 115 3 0 chr2 5780456 5780588 -244907266 - L1MA3 LINE L1 -651 5649 5514 232 341 57 16 chr2 5781328 5781451 -244906403 + MIR SINE MIR 67 194 -68 1995 113 60 0 chr2 5781453 5781737 -244906117 + AluSx SINE Alu 1 301 -11 1494 190 10 14 chr2 5782017 5782306 -244905548 + AluJo SINE Alu 1 288 -24 30 45 0 0 chr2 5782306 5782350 -244905504 + AT_rich Low_complexity Low_complexity 1 44 0 204 264 138 11 chr2 5782482 5782569 -244905285 + L2 LINE L2 3174 3271 -1 186 103 0 0 chr2 5782619 5782648 -244905206 + (TG)n Simple_repeat Simple_repeat 2 30 0 2181 105 7 0 chr2 5782995 5783281 -244904573 + AluSx SINE Alu 1 288 -24 319 326 17 12 chr2 5784698 5784870 -244902984 - MLT1L LTR MaLR 0 615 443 323 258 75 0 chr2 5786445 5786538 -244901316 - MER45A DNA AcHobo -53 125 26 313 356 31 6 chr2 5786615 5786775 -244901079 + MIR SINE MIR 48 211 -51 2408 68 3 3 chr2 5787122 5787433 -244900421 + AluY SINE Alu 1 311 0 1637 161 39 86 chr2 5787451 5787835 -244900019 + MER47A DNA MER2_type 1 366 0 2129 110 0 0 chr2 5788623 5788931 -244898923 - AluY SINE Alu 0 308 1 183 328 16 64 chr2 5790030 5790155 -244897699 - L3 LINE CR1 -1 1576 1458 33 0 0 0 chr2 5792499 5792532 -244895322 + AT_rich Low_complexity Low_complexity 1 33 0 182 333 48 0 chr2 5792667 5792730 -244895124 - MIR SINE MIR -119 143 78 2418 238 67 12 chr2 5792976 5793573 -244894281 - LTR27 LTR ERV1 0 636 7 1652 171 14 73 chr2 5793746 5794115 -244893739 - MLT1B LTR MaLR 0 390 44 278 250 0 0 chr2 5794628 5794688 -244893166 + MIR SINE MIR 87 146 -62 279 314 69 10 chr2 5794820 5794922 -244892932 - MIR SINE MIR -48 214 107 23 0 0 0 chr2 5796725 5796748 -244891106 + AT_rich Low_complexity Low_complexity 1 23 0 199 338 0 15 chr2 5798491 5798559 -244889295 - MIR SINE MIR -76 186 120 294 274 96 37 chr2 5800882 5801017 -244886837 + MIR3 SINE MIR 63 205 -3 333 315 19 9 chr2 5801201 5801309 -244886545 + L2 LINE L2 3154 3262 -51 241 47 156 16 chr2 5801362 5801426 -244886428 + (TTAAA)n Simple_repeat Simple_repeat 4 76 0 327 191 0 32 chr2 5801726 5801852 -244886002 + GA-rich Low_complexity Low_complexity 3 124 0 1465 191 28 3 chr2 5801875 5802158 -244885696 + AluJo SINE Alu 9 298 -14 809 51 5 82 chr2 5802193 5802388 -244885466 + (GGGAA)n Simple_repeat Simple_repeat 1 180 0 276 163 0 50 chr2 5802372 5802452 -244885402 + GA-rich Low_complexity Low_complexity 3 78 0 * 480 191 40 0 chr2 5802600 5802726 -244885128 + GA-rich Low_complexity Low_complexity 4 134 0 2093 122 0 7 chr2 5802848 5803143 -244884711 + AluSx SINE Alu 1 293 -19 5816 245 31 37 chr2 5803545 5804664 -244883190 + L1M4 LINE L1 20 1524 -5121 2078 131 0 0 chr2 5804664 5804966 -244882888 + AluSx SINE Alu 1 302 0 5816 245 31 37 chr2 5804966 5805610 -244882244 + L1M4 LINE L1 1524 2171 -4474 4153 227 112 68 chr2 5805640 5807072 -244880782 + L1MDa LINE L1 35 1542 -4998 1969 172 143 8 chr2 5807072 5807449 -244880405 - MSTA LTR MaLR 0 428 1 4153 227 112 68 chr2 5807449 5807565 -244880289 + L1MDa LINE L1 1542 1651 -4889 2572 267 56 49 chr2 5807596 5809294 -244878560 - L1PA12 LINE L1 -5608 1973 1 343 167 61 0 chr2 5809393 5809459 -244878395 - L1MDa LINE L1 -6436 104 35 23 0 0 0 chr2 5811342 5811365 -244876489 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr2 5811635 5811657 -244876197 + AT_rich Low_complexity Low_complexity 1 22 0 657 298 38 78 chr2 5813071 5813417 -244874437 + MLT1H LTR MaLR 23 354 -195 4666 215 42 82 chr2 5815331 5816839 -244871015 - Charlie1a DNA MER1_type -1 1454 6 200 306 145 40 chr2 5817978 5818102 -244869752 + L2 LINE L2 3136 3272 0 2185 253 54 19 chr2 5818401 5818904 -244868950 - L1 LINE L1 -2580 3566 3082 2225 147 86 18 chr2 5818904 5819299 -244868555 - MSTB LTR MaLR -4 422 1 2185 253 54 19 chr2 5819299 5819796 -244868058 - L1 LINE L1 -3064 3082 2498 1681 239 121 63 chr2 5819793 5820380 -244867474 - L1M4b LINE L1 -6219 640 20 * 378 335 107 5 chr2 5822339 5822545 -244865309 + MIR SINE MIR 31 257 -5 705 73 0 0 chr2 5823237 5823333 -244864521 + (TA)n Simple_repeat Simple_repeat 2 97 0 234 0 0 0 chr2 5823573 5823599 -244864255 + (TA)n Simple_repeat Simple_repeat 2 27 0 387 317 42 7 chr2 5824556 5824698 -244863156 + MIR SINE MIR 7 153 -109 2249 110 3 7 chr2 5828248 5828557 -244859297 - AluSq SINE Alu -5 308 1 693 290 157 34 chr2 5830023 5830430 -244857424 - LTR16B LTR ERVL -1 463 7 2384 138 119 8 chr2 5832877 5833262 -244854592 - MSTA LTR MaLR 0 428 1 439 331 82 5 chr2 5833433 5833617 -244854237 - L2 LINE L2 -163 3109 2912 259 150 33 0 chr2 5833642 5833702 -244854152 + CT-rich Low_complexity Low_complexity 3 64 0 1910 197 110 22 chr2 5833710 5834212 -244853642 - LTR10B LTR ERV1 -1 546 1 270 253 179 0 chr2 5834342 5834437 -244853417 - MLT1D LTR MaLR 0 505 394 370 313 96 34 chr2 5834762 5835314 -244852540 - L1ME3A LINE L1 -239 5931 5346 27 29 0 0 chr2 5835492 5835526 -244852328 + AT_rich Low_complexity Low_complexity 1 34 0 426 302 101 28 chr2 5835554 5835842 -244852012 - L1ME3A LINE L1 -1108 5038 4730 2260 113 0 0 chr2 5835868 5836169 -244851685 - AluSq SINE Alu -12 301 1 227 286 160 45 chr2 5836266 5836467 -244851387 + MIR SINE MIR 36 256 -6 21 0 0 0 chr2 5836542 5836563 -244851291 + AT_rich Low_complexity Low_complexity 1 21 0 202 321 136 31 chr2 5837110 5837272 -244850582 - MIR SINE MIR -6 256 78 1401 208 71 75 chr2 5837275 5837742 -244850112 - MLT1C LTR MaLR -2 465 1 345 47 0 0 chr2 5837753 5837796 -244850058 + (TG)n Simple_repeat Simple_repeat 2 44 0 398 336 39 50 chr2 5837960 5838219 -244849635 + L3 LINE CR1 836 1091 -486 225 245 43 43 chr2 5838219 5838313 -244849541 - MLT1J1 LTR MaLR 0 446 353 1585 211 38 30 chr2 5838324 5838694 -244849160 + MLT1A2 LTR MaLR 2 374 0 2494 67 3 0 chr2 5840026 5840326 -244847528 - AluY SINE Alu -10 301 1 262 279 38 13 chr2 5840736 5840815 -244847039 - MLT1G LTR MaLR -503 87 7 954 151 0 0 chr2 5841089 5841241 -244846613 + L1PBa LINE L1 3 154 -6709 430 176 12 0 chr2 5841307 5841392 -244846462 + L1PBa LINE L1 856 941 -5922 7316 208 17 3 chr2 5841484 5843611 -244844243 + L1PBa LINE L1 177 1644 -5219 227 88 29 0 chr2 5843611 5843645 -244844209 + MSTA LTR MaLR 1 35 -393 203 274 96 59 chr2 5844121 5844256 -244843598 + MER5B DNA MER1_type 5 144 -34 286 214 87 29 chr2 5844141 5844244 -244843610 - MER5A DNA MER1_type -22 167 59 2321 100 0 0 chr2 5844469 5844770 -244843084 + AluSx SINE Alu 1 301 -11 2807 145 59 11 chr2 5846579 5847104 -244840750 + Tigger3(Golem) DNA MER2_type 2478 3027 -2 328 202 16 57 chr2 5847104 5847227 -244840627 - Charlie2 DNA MER1_type -507 2355 2238 523 297 72 14 chr2 5847323 5847532 -244840322 - Charlie2 DNA MER1_type -2614 248 28 1877 207 71 7 chr2 5848000 5848405 -244839449 + MLT2C2 LTR ERVL 3 534 -20 361 244 47 0 chr2 5848415 5848501 -244839353 - L1MC4 LINE L1 -1339 6703 6614 302 183 0 17 chr2 5848472 5848532 -244839322 - L1MCa LINE L1 -4362 2064 2006 * 401 326 102 5 chr2 5848589 5848785 -244839069 + MIR SINE MIR 23 237 -25 265 137 63 105 chr2 5849356 5849451 -244838403 + L2 LINE L2 3117 3207 -106 344 229 0 0 chr2 5849929 5849999 -244837855 + MIR SINE MIR 86 155 -107 286 174 0 10 chr2 5850007 5850076 -244837778 - MLT2D LTR ERVL -2 412 367 738 209 10 19 chr2 5850076 5850494 -244837360 + (CATATA)n Simple_repeat Simple_repeat 1 414 0 225 231 0 0 chr2 5850494 5850546 -244837308 - L1MC4 LINE L1 -1343 6699 6648 585 173 27 0 chr2 5850548 5850698 -244837156 + (CATATA)n Simple_repeat Simple_repeat 4 157 0 2088 189 16 7 chr2 5850698 5851080 -244836774 - MLT2D LTR ERVL -40 480 1 1191 231 19 68 chr2 5852611 5853087 -244834767 + L1MA9 LINE L1 5836 6282 -30 281 26 26 0 chr2 5853158 5853196 -244834658 + (CA)n Simple_repeat Simple_repeat 2 40 0 1189 282 61 22 chr2 5853772 5854261 -244833593 - MLT1H LTR MaLR -41 508 1 356 271 62 8 chr2 5854706 5854835 -244833019 - MLT1I LTR MaLR 0 409 274 598 215 66 0 chr2 5854935 5855056 -244832798 + FLAM_A SINE Alu 1 129 -4 180 366 43 0 chr2 5855720 5855813 -244832041 - MIR SINE MIR -59 203 107 256 196 0 0 chr2 5857239 5857285 -244830569 + L2 LINE L2 3261 3306 -7 290 326 120 23 chr2 5857300 5857611 -244830243 - L2 LINE L2 -2 3270 2871 183 266 0 0 chr2 5857621 5857685 -244830169 + (TTCA)n Simple_repeat Simple_repeat 3 66 0 3153 236 74 10 chr2 5857885 5859120 -244828734 + Charlie1a DNA MER1_type 1 1384 -71 537 275 80 40 chr2 5859388 5859463 -244828391 - MIR SINE MIR -29 233 162 2774 110 6 3 chr2 5859463 5859826 -244828028 + THE1B LTR MaLR 1 364 0 537 275 80 40 chr2 5859826 5859950 -244827904 - MIR SINE MIR -100 162 26 193 239 0 0 chr2 5860827 5860873 -244826981 + MER5A DNA MER1_type 122 167 -22 1376 231 21 43 chr2 5861722 5862095 -244825759 + MLT1A1 LTR MaLR 1 365 0 331 318 18 17 chr2 5862691 5862890 -244824964 - L1M4 LINE L1 -1044 5102 4903 339 254 114 71 chr2 5862933 5863284 -244824570 - L1M4 LINE L1 -1316 4830 4465 1031 145 6 0 chr2 5863320 5863486 -244824368 - AluSg/x SINE Alu -5 307 141 304 291 54 51 chr2 5863491 5863786 -244824068 - L1M4 LINE L1 -1730 4416 4121 851 179 118 5 chr2 5863787 5863999 -244823855 + MER44D DNA MER2_type 2 507 -102 2687 151 31 7 chr2 5863999 5864415 -244823439 - MSTA LTR MaLR -2 426 1 982 154 6 0 chr2 5864419 5864575 -244823279 + AluSg/x SINE Alu 145 301 -9 1715 131 95 0 chr2 5864781 5865064 -244822790 + AluSx SINE Alu 1 310 -2 283 146 45 22 chr2 5865699 5865788 -244822066 + (TATATG)n Simple_repeat Simple_repeat 6 96 0 380 301 70 7 chr2 5866416 5866559 -244821295 + MER5B DNA MER1_type 1 152 -26 189 0 0 0 chr2 5866714 5866735 -244821119 + (T)n Simple_repeat Simple_repeat 1 21 0 207 243 29 0 chr2 5867218 5867288 -244820566 + (TA)n Simple_repeat Simple_repeat 2 73 0 241 321 89 0 chr2 5867477 5867589 -244820265 - MIR SINE MIR -70 192 71 356 47 0 0 chr2 5869162 5869205 -244818649 + (TG)n Simple_repeat Simple_repeat 2 44 0 210 338 15 0 chr2 5870069 5870137 -244817717 + MIR3 SINE MIR 137 205 -3 1026 194 10 5 chr2 5870261 5870457 -244817397 - MLT2C1 LTR ERVL -54 343 147 1297 214 143 31 chr2 5870460 5870816 -244817038 - MSTD LTR MaLR 0 396 1 1256 239 49 3 chr2 5870816 5871121 -244816733 - MSTD-int LTR MaLR 0 1735 1417 1547 163 71 37 chr2 5871121 5871447 -244816407 + THE1C LTR MaLR 1 337 -38 3467 249 114 37 chr2 5871565 5872756 -244815098 - MSTD-int LTR MaLR -369 1282 1 1463 236 87 47 chr2 5872756 5873137 -244814717 - MSTD LTR MaLR 0 396 1 877 140 7 0 chr2 5873137 5873280 -244814574 - MLT2C2 LTR ERVL -316 148 5 334 222 13 6 chr2 5874109 5874267 -244813587 + GA-rich Low_complexity Low_complexity 1 159 0 2158 130 0 0 chr2 5874526 5874833 -244813021 + AluSx SINE Alu 5 311 -1 636 269 47 96 chr2 5875150 5875537 -244812317 + LTR16B LTR ERVL 84 451 -13 477 278 28 0 chr2 5875543 5875651 -244812203 - MER81 DNA DNA -2 112 2 219 308 187 19 chr2 5876102 5876209 -244811645 - L2 LINE L2 -1 3271 3147 210 128 0 0 chr2 5876282 5876321 -244811533 + (TTA)n Simple_repeat Simple_repeat 3 41 0 224 399 35 35 chr2 5876353 5876556 -244811298 - L2 LINE L2 -244 3028 2826 1097 203 22 22 chr2 5876589 5876821 -244811033 + MLT1A1 LTR MaLR 1 232 -133 2011 184 49 0 chr2 5876827 5877175 -244810679 - MLT1A1 LTR MaLR 0 365 1 196 221 52 91 chr2 5878074 5878151 -244809703 - MIR SINE MIR -108 154 81 384 269 99 41 chr2 5878534 5878705 -244809149 + MLT1J2 LTR MaLR 270 450 0 275 360 124 22 chr2 5878719 5878994 -244808860 + L2 LINE L2 2571 2873 -441 2328 63 11 0 chr2 5879081 5879367 -244808487 - AluY SINE Alu -22 289 1 2895 200 107 74 chr2 5879367 5880288 -244807566 + MER63D DNA MER1_type 10 971 -90 1594 164 20 49 chr2 5880288 5880593 -244807261 + AluJb SINE Alu 1 296 -16 2895 200 107 74 chr2 5880593 5880685 -244807169 + MER63D DNA MER1_type 971 1059 -2 207 378 72 9 chr2 5880702 5880813 -244807041 + L2 LINE L2 2948 3065 -207 1637 234 121 59 chr2 5881510 5882189 -244805665 + MER50 LTR ERV1 14 734 0 245 414 21 21 chr2 5882514 5882705 -244805149 + MIR SINE MIR 47 237 -25 24 0 0 0 chr2 5882797 5882821 -244805033 + AT_rich Low_complexity Low_complexity 1 24 0 770 230 59 59 chr2 5882966 5883188 -244804666 + MIR SINE MIR 15 236 -26 2627 119 11 16 chr2 5883325 5883702 -244804152 - THE1C LTR MaLR 0 375 1 922 202 62 31 chr2 5884116 5884373 -244803481 + MER97a DNA MER1_type? 47 311 -583 3308 133 16 4 chr2 5884400 5884913 -244802941 - L1PA16 LINE L1 -140 6026 5508 9475 86 5 13 chr2 5885021 5886304 -244801550 - L1P3 LINE L1 -5188 1273 2 222 182 26 13 chr2 5886637 5886714 -244801140 + (TG)n Simple_repeat Simple_repeat 1 78 0 22 35 0 0 chr2 5887154 5887183 -244800671 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 5887227 5887249 -244800605 + AT_rich Low_complexity Low_complexity 1 22 0 726 155 17 28 chr2 5888269 5888450 -244799404 + GA-rich Low_complexity Low_complexity 2 180 0 22 35 0 0 chr2 5890505 5890534 -244797320 + AT_rich Low_complexity Low_complexity 1 29 0 1422 266 113 28 chr2 5891801 5892597 -244795257 + HAL1 LINE L1 1028 1891 -616 451 245 113 34 chr2 5893476 5893741 -244794113 - L1ME4a LINE L1 -219 5902 5617 255 237 55 48 chr2 5893892 5894011 -244793843 - L1ME4a LINE L1 -929 5404 5299 200 362 140 9 chr2 5894188 5894409 -244793445 + L2 LINE L2 2436 2685 -629 531 235 75 30 chr2 5894532 5894959 -244792895 + MLT1C LTR MaLR 6 467 0 3096 86 7 18 chr2 5895063 5895518 -244792336 - L1PA13 LINE L1 -4 6159 5710 204 233 0 0 chr2 5895995 5896038 -244791816 + (CATATA)n Simple_repeat Simple_repeat 3 45 0 456 277 119 45 chr2 5896094 5896672 -244791182 - L1ME4a LINE L1 -238 5883 5263 802 165 170 6 chr2 5896745 5896927 -244790927 - Tigger5 DNA MER2_type 0 2323 2112 1040 257 55 3 chr2 5896932 5897224 -244790630 - Tigger5 DNA MER2_type -2016 307 1 1881 110 18 18 chr2 5901035 5901337 -244786517 - AluSg SINE Alu 0 302 1 2020 135 0 0 chr2 5901626 5901929 -244785925 - AluSx SINE Alu 0 303 1 28 0 0 0 chr2 5902497 5902525 -244785329 + AT_rich Low_complexity Low_complexity 1 28 0 851 151 20 0 chr2 5904512 5904664 -244783190 + MLT2D LTR ERVL 1 155 -259 229 143 143 18 chr2 5904731 5904787 -244783067 - MLT2C2 LTR ERVL -285 179 117 * 1005 209 34 34 chr2 5904751 5905019 -244782835 + MLT2D LTR ERVL 145 412 -2 1159 221 130 54 chr2 5905069 5905519 -244782335 + MLT2B1 LTR ERVL 1 492 -28 324 0 0 0 chr2 5905519 5905555 -244782299 + (CA)n Simple_repeat Simple_repeat 2 37 0 1159 221 130 54 chr2 5905555 5905587 -244782267 + MLT2B1 LTR ERVL 492 520 0 188 358 59 64 chr2 5905631 5905835 -244782019 - L2 LINE L2 -113 3159 2957 2438 152 11 2 chr2 5905969 5906410 -244781444 - L1PB4 LINE L1 -318 5838 5394 1475 163 50 50 chr2 5906715 5907040 -244780814 - AluJo SINE Alu 0 327 3 205 319 87 0 chr2 5908191 5908260 -244779594 + MER91C DNA MER1_type 48 122 -18 915 202 0 22 chr2 5908305 5908483 -244779371 + AluJb SINE Alu 127 300 -12 346 247 103 0 chr2 5909159 5909256 -244778598 - L2 LINE L2 -12 3260 3154 688 315 94 44 chr2 5910317 5911310 -244776544 - L2 LINE L2 -16 3297 2191 951 43 0 0 chr2 5911383 5911500 -244776354 + L1PA13 LINE L1 6041 6157 -6 1572 210 127 50 chr2 5911988 5912469 -244775385 + MLT2B1 LTR ERVL 1 518 -2 408 359 95 9 chr2 5915250 5915481 -244772373 + L1ME3A LINE L1 5549 5799 -2009 336 253 33 22 chr2 5916090 5916181 -244771673 - MIR SINE MIR -28 234 143 355 223 268 0 chr2 5916525 5916637 -244771217 - MIR SINE MIR -115 147 6 644 280 82 0 chr2 5916842 5917049 -244770805 + MER58A DNA MER1_type 1 224 0 319 115 0 0 chr2 5917573 5917625 -244770229 + MADE1 DNA Mariner 29 80 0 290 154 92 0 chr2 5918143 5918208 -244769646 + MER67A LTR ERV1 18 88 -455 1363 251 46 12 chr2 5918264 5918679 -244769175 + MER67A LTR ERV1 84 512 -31 257 303 50 10 chr2 5918804 5918903 -244768951 - MIR SINE MIR -59 203 101 345 390 39 18 chr2 5919332 5919614 -244768240 - L3 LINE CR1 -554 1023 736 456 289 70 18 chr2 5920344 5920686 -244767168 + L1M4 LINE L1 2201 2560 -3586 631 267 70 23 chr2 5920702 5920960 -244766894 + L1ME3A LINE L1 5859 6128 -42 625 316 201 5 chr2 5921159 5921533 -244766321 + L2 LINE L2 2867 3313 0 612 285 117 61 chr2 5922750 5923076 -244764778 + L2 LINE L2 2970 3313 0 26 0 0 0 chr2 5923166 5923192 -244764662 + AT_rich Low_complexity Low_complexity 1 26 0 276 280 75 19 chr2 5923265 5923372 -244764482 - MIR SINE MIR -142 120 8 420 37 0 0 chr2 5924046 5924100 -244763754 + (CA)n Simple_repeat Simple_repeat 2 55 0 375 368 0 0 chr2 5925094 5925219 -244762635 + MIR SINE MIR 22 146 -62 736 178 0 15 chr2 5925426 5925561 -244762293 + FLAM_C SINE Alu 1 133 0 497 156 33 25 chr2 5925566 5925688 -244762166 - MER53 DNA DNA -12 177 55 183 278 130 99 chr2 5926627 5926789 -244761065 + L3b LINE CR1 1337 1503 -80 228 364 78 31 chr2 5926835 5926964 -244760890 + MIR3 SINE MIR 11 145 -63 374 318 94 15 chr2 5927129 5927330 -244760524 + L3 LINE CR1 1361 1577 0 186 103 0 0 chr2 5927379 5927408 -244760446 + (TTTTTG)n Simple_repeat Simple_repeat 6 34 0 303 257 59 65 chr2 5927643 5927834 -244760020 + MIR SINE MIR 5 196 -65 183 80 0 0 chr2 5929468 5929493 -244758361 + (GA)n Simple_repeat Simple_repeat 2 26 0 182 344 0 0 chr2 5929678 5929742 -244758112 - MIR SINE MIR -129 133 70 612 169 92 23 chr2 5929745 5929875 -244757979 - MSTA LTR MaLR -234 141 3 322 345 31 16 chr2 5929896 5930215 -244757639 + L1M4 LINE L1 3834 4157 -1989 22 0 0 0 chr2 5930281 5930303 -244757551 + AT_rich Low_complexity Low_complexity 1 22 0 225 275 12 12 chr2 5930335 5930415 -244757439 - LTR33A LTR ERVL 0 523 444 575 297 40 18 chr2 5930419 5930695 -244757159 - MLT1C LTR MaLR 0 467 186 705 279 8 8 chr2 5930820 5931074 -244756780 - MLT1C LTR MaLR -213 254 1 25 0 0 0 chr2 5931475 5931500 -244756354 + AT_rich Low_complexity Low_complexity 1 25 0 264 329 32 4 chr2 5931649 5931895 -244755959 + L1ME3A LINE L1 5695 5947 -223 417 278 115 14 chr2 5933572 5933781 -244754073 - LTR16A LTR ERVL -14 436 207 767 285 119 34 chr2 5933860 5934576 -244753278 + HAL1 LINE L1 979 1755 -752 1649 162 72 57 chr2 5934648 5935067 -244752787 - MSTB1 LTR MaLR -5 427 3 274 262 38 93 chr2 5935156 5935446 -244752408 + HAL1 LINE L1 1936 2209 -298 445 216 93 37 chr2 5935768 5935930 -244751924 + MLT1D LTR MaLR 22 192 -313 816 168 120 29 chr2 5935976 5936184 -244751670 + MLT1D LTR MaLR 279 505 0 295 228 114 74 chr2 5936535 5936684 -244751170 + MIR SINE MIR 19 173 -89 1827 166 3 0 chr2 5937230 5937513 -244750341 - AluJb SINE Alu -23 289 6 484 285 15 0 chr2 5937710 5937847 -244750007 + L3 LINE CR1 1201 1339 -238 305 328 25 25 chr2 5938238 5938360 -244749494 - MER5A DNA MER1_type -12 177 56 216 200 0 0 chr2 5938610 5938660 -244749194 + (TG)n Simple_repeat Simple_repeat 2 51 0 1399 273 22 0 chr2 5938675 5939185 -244748669 + L1M4 LINE L1 2110 2630 -3516 397 169 34 59 chr2 5939360 5939478 -244748376 - LTR67 LTR ERVL 0 557 443 2485 46 0 0 chr2 5941006 5941312 -244746542 - L1PA2 LINE L1 -7 6148 5843 304 87 0 0 chr2 5941699 5941745 -244746109 + MADE1 DNA Mariner 5 50 -30 921 160 30 5 chr2 5941753 5942388 -244745466 + (TCTA)n Simple_repeat Simple_repeat 1 651 0 402 21 0 0 chr2 5942409 5942456 -244745398 + (TG)n Simple_repeat Simple_repeat 2 48 0 271 338 163 0 chr2 5943010 5943170 -244744684 + MIR SINE MIR 77 262 0 21 36 0 0 chr2 5943454 5943482 -244744372 + AT_rich Low_complexity Low_complexity 1 28 0 295 312 22 14 chr2 5943603 5943741 -244744113 + MLT1J2 LTR MaLR 46 184 -266 28 48 0 0 chr2 5945508 5945550 -244742304 + AT_rich Low_complexity Low_complexity 1 42 0 6197 119 67 2 chr2 5945892 5946989 -244740865 - L1PBa LINE L1 -4016 2847 1680 1274 103 0 0 chr2 5947089 5947263 -244740591 + AluY SINE Alu 138 311 0 1490 134 0 0 chr2 5947620 5947836 -244740018 - AluY SINE Alu -13 298 83 983 192 0 0 chr2 5949327 5949494 -244738360 - FRAM SINE Alu -9 167 1 329 371 102 15 chr2 5949840 5950045 -244737809 + MIR SINE MIR 40 262 0 274 328 123 0 chr2 5950528 5950650 -244737204 - MIR SINE MIR -76 186 50 228 238 0 48 chr2 5952090 5952153 -244735701 + GA-rich Low_complexity Low_complexity 3 62 0 6320 196 48 11 chr2 5952554 5953679 -244734175 + L1 LINE L1 3180 4377 -1769 659 289 24 14 chr2 5953679 5953887 -244733967 - MER6B DNA MER2_type 0 210 1 6320 196 48 11 chr2 5953887 5954268 -244733586 + L1 LINE L1 4377 4742 -1404 5338 253 100 58 chr2 5954280 5956393 -244731461 - L1MDa LINE L1 -4336 2204 3 23 68 0 0 chr2 5956598 5956642 -244731212 + AT_rich Low_complexity Low_complexity 1 44 0 26 0 0 0 chr2 5957075 5957101 -244730753 + AT_rich Low_complexity Low_complexity 1 26 0 431 272 109 22 chr2 5957961 5958145 -244729709 - MIR SINE MIR -15 247 48 421 288 14 63 chr2 5959660 5959882 -244727972 - L2 LINE L2 0 3313 3103 582 159 0 65 chr2 5959909 5960016 -244727838 + AluSq/x SINE Alu 14 113 -199 1054 73 15 0 chr2 5960016 5960152 -244727702 - THE1C LTR MaLR 0 375 238 938 243 136 20 chr2 5960164 5960604 -244727250 - L1M4 LINE L1 -2098 4048 3558 1262 114 15 0 chr2 5960607 5960808 -244727046 - L1MA3 LINE L1 0 6305 6102 5017 210 29 66 chr2 5960809 5962601 -244725253 - L1 LINE L1 -827 6738 5115 2177 116 3 0 chr2 5962601 5962902 -244724952 + AluSp SINE Alu 3 304 -9 5017 210 29 66 chr2 5962902 5963208 -244724646 - L1 LINE L1 -2450 5115 4799 956 93 8 0 chr2 5963212 5963341 -244724513 - AluSc SINE Alu -15 294 165 850 219 60 17 chr2 5963341 5963643 -244724211 - L1 LINE L1 -2759 4806 4492 6883 75 1 4 chr2 5963772 5964997 -244722857 - L1PA7 LINE L1 -29 6125 4906 14251 183 36 9 chr2 5965002 5967552 -244720302 - L1 LINE L1 -4936 2629 11 452 284 21 76 chr2 5967643 5968172 -244719682 - L1M4 LINE L1 -2696 3450 2951 26 50 0 0 chr2 5968862 5968902 -244718952 + AT_rich Low_complexity Low_complexity 1 40 0 206 264 0 0 chr2 5969985 5970038 -244717816 + L2 LINE L2 3203 3255 -17 256 279 67 19 chr2 5971379 5971483 -244716371 - MIR SINE MIR -64 144 36 395 295 26 58 chr2 5971484 5971640 -244716214 + MIR SINE MIR 56 206 -56 241 418 112 16 chr2 5971743 5971992 -244715862 - L2 LINE L2 -40 3232 2960 1701 252 89 29 chr2 5972096 5972755 -244715099 - L1ME1 LINE L1 -114 6550 5852 194 193 18 0 chr2 5972755 5972812 -244715042 + (TA)n Simple_repeat Simple_repeat 1 58 0 1957 260 131 121 chr2 5972822 5973494 -244714360 - L1ME1 LINE L1 -797 5847 5183 696 213 0 0 chr2 5973494 5973616 -244714238 + FAM SINE Alu 21 142 -43 1957 260 131 121 chr2 5973616 5974873 -244712981 - L1ME1 LINE L1 -1461 5183 3778 1146 237 28 59 chr2 5974889 5975244 -244712610 + MLT1A1 LTR MaLR 1 344 -21 614 244 0 0 chr2 5975242 5975361 -244712493 - MLT1A1 LTR MaLR -246 119 1 * 1086 242 93 8 chr2 5975430 5975645 -244712209 - L1ME1 LINE L1 -2884 3760 3565 273 57 0 0 chr2 5975645 5975680 -244712174 + (TG)n Simple_repeat Simple_repeat 2 36 0 1086 242 93 8 chr2 5975680 5975968 -244711886 - L1ME1 LINE L1 -3079 3565 3214 297 227 78 50 chr2 5975984 5976125 -244711729 - L1ME1 LINE L1 -6381 161 17 189 74 0 0 chr2 5977038 5977065 -244710789 + (TAAAA)n Simple_repeat Simple_repeat 1 27 0 1025 213 115 20 chr2 5977387 5977640 -244710214 + AluJo SINE Alu 1 277 -35 1965 138 7 3 chr2 5977658 5977949 -244709905 + AluSx SINE Alu 1 292 -20 36 40 0 0 chr2 5977949 5977999 -244709855 + AT_rich Low_complexity Low_complexity 1 50 0 222 311 27 14 chr2 5979148 5979222 -244708632 - MIR SINE MIR -150 112 38 731 160 33 0 chr2 5979349 5979499 -244708355 + BC200 scRNA scRNA 1 155 -45 180 239 68 45 chr2 5980774 5980862 -244706992 - MIR SINE MIR -103 105 16 27 73 0 0 chr2 5980952 5981007 -244706847 + AT_rich Low_complexity Low_complexity 1 55 0 278 325 71 26 chr2 5982544 5982698 -244705156 + L2 LINE L2 2914 3074 -198 217 354 25 0 chr2 5984841 5984920 -244702934 - L2 LINE L2 -5 3267 3187 487 324 62 29 chr2 5985800 5986041 -244701813 - MIR SINE MIR -11 251 3 562 311 42 33 chr2 5987556 5987768 -244700086 + MIR SINE MIR 46 259 -3 234 373 49 95 chr2 5987890 5988153 -244699701 - L2 LINE L2 -6 3266 3016 258 256 35 35 chr2 5988754 5988840 -244699014 + L2 LINE L2 3002 3087 -185 21 0 0 0 chr2 5988938 5988959 -244698895 + AT_rich Low_complexity Low_complexity 1 21 0 297 211 203 24 chr2 5990193 5990316 -244697538 - MER5A DNA MER1_type -2 187 43 284 269 120 0 chr2 5991540 5991648 -244696206 + L1ME LINE L1 5561 5681 -440 267 294 65 0 chr2 5991932 5992024 -244695830 + MIR SINE MIR 124 221 -41 230 258 32 0 chr2 5992848 5992910 -244694944 + CT-rich Low_complexity Low_complexity 1 64 0 465 34 0 0 chr2 5993376 5993435 -244694419 + (TG)n Simple_repeat Simple_repeat 1 59 0 1896 149 0 34 chr2 5993546 5993868 -244693986 + AluSx SINE Alu 1 311 -1 5914 213 51 19 chr2 5994759 5995161 -244692693 + L1MC1 LINE L1 4005 4393 -1940 1597 231 72 20 chr2 5995161 5995508 -244692346 - MLT1A1 LTR MaLR 0 365 1 5914 213 51 19 chr2 5995508 5996193 -244691661 + L1MC1 LINE L1 4393 5055 -1278 2012 131 34 0 chr2 5996193 5996484 -244691370 - AluSx SINE Alu -11 301 1 5914 213 51 19 chr2 5996484 5997670 -244690184 + L1MC1 LINE L1 5055 6333 0 337 281 75 50 chr2 5998002 5998162 -244689692 + MIR SINE MIR 87 250 -12 1604 378 25 5 chr2 5998167 5998535 -244689319 + THE1C LTR MaLR 1 375 0 258 338 45 8 chr2 5999024 5999157 -244688697 - MIR SINE MIR -74 188 51 320 243 117 10 chr2 5999844 5999947 -244687907 + MIR SINE MIR 30 143 -65 198 0 0 0 chr2 6000415 6000437 -244687417 + (TAAA)n Simple_repeat Simple_repeat 3 24 0 198 250 0 0 chr2 6001878 6001922 -244685932 - L3b LINE CR1 -8 1575 1532 246 309 24 67 chr2 6001923 6002088 -244685766 + MER117 DNA MER1_type 2 159 -38 314 228 32 65 chr2 6002210 6002333 -244685521 - MLT1F1 LTR MaLR -6 561 443 281 266 101 15 chr2 6002329 6002512 -244685342 - MLT1H1 LTR MaLR -325 230 1 * 186 302 0 0 chr2 6003007 6003060 -244684794 - MIR3 SINE MIR -43 165 113 1231 111 6 18 chr2 6003554 6003725 -244684129 + AluSq SINE Alu 12 180 -133 1264 67 0 0 chr2 6003826 6003976 -244683878 - AluSq/x SINE Alu -162 150 1 325 371 51 31 chr2 6004447 6004800 -244683054 + L3 LINE CR1 666 1025 -552 250 333 0 46 chr2 6004858 6004966 -244682888 + L3 LINE CR1 1155 1257 -320 191 36 36 0 chr2 6005732 6005760 -244682094 + (TG)n Simple_repeat Simple_repeat 1 29 0 331 343 43 60 chr2 6006229 6006462 -244681392 + L3 LINE CR1 1141 1369 -208 241 244 0 0 chr2 6007015 6007069 -244680785 - MIR SINE MIR -84 124 71 232 299 13 13 chr2 6007339 6007416 -244680438 + MLT1E LTR MaLR 209 285 -308 185 290 93 28 chr2 6007464 6007571 -244680283 - MIR SINE MIR -63 145 32 311 276 11 0 chr2 6007911 6007998 -244679856 - MIR SINE MIR -168 94 7 25 51 0 0 chr2 6008563 6008602 -244679252 + AT_rich Low_complexity Low_complexity 1 39 0 454 321 63 66 chr2 6008883 6009279 -244678575 + L2 LINE L2 2850 3244 -28 2183 210 8 32 chr2 6010325 6010796 -244677058 + MLT1C LTR MaLR 8 467 0 1207 205 101 14 chr2 6012141 6012419 -244675435 + MER58B DNA MER1_type 36 337 -4 28 29 0 0 chr2 6012656 6012691 -244675163 + AT_rich Low_complexity Low_complexity 1 35 0 1118 30 8 8 chr2 6012791 6012922 -244674932 - AluY SINE Alu -180 131 1 273 326 56 41 chr2 6013892 6014088 -244673766 + MIR SINE MIR 35 233 -29 350 350 64 6 chr2 6014117 6014274 -244673580 - MIR SINE MIR -77 185 20 480 285 158 13 chr2 6014281 6014439 -244673415 - MER5A DNA MER1_type 0 189 9 223 93 0 74 chr2 6014535 6014589 -244673265 + (GGAGAA)n Simple_repeat Simple_repeat 2 51 0 208 315 56 11 chr2 6014960 6015049 -244672805 + MIR SINE MIR 118 210 -52 2047 213 115 14 chr2 6015049 6015552 -244672302 - MLT2B3 LTR ERVL 0 554 1 652 264 40 40 chr2 6015674 6015914 -244671940 - MIR SINE MIR -11 251 16 1946 133 96 37 chr2 6016497 6016851 -244671003 - THE1C LTR MaLR 0 375 1 1797 187 41 44 chr2 6016966 6017330 -244670524 + MLT1A1 LTR MaLR 3 365 0 225 241 24 60 chr2 6018316 6018399 -244669455 - MIR3 SINE MIR -11 197 118 260 250 80 10 chr2 6018449 6018549 -244669305 + MIR SINE MIR 81 187 -75 232 311 10 48 chr2 6018547 6018650 -244669204 + L2 LINE L2 3215 3313 0 * 206 306 106 12 chr2 6018706 6018791 -244669063 - MIR3 SINE MIR -102 106 14 372 271 37 0 chr2 6019893 6020000 -244667854 + MER94 DNA DNA 19 129 -5 317 125 0 83 chr2 6020277 6020349 -244667505 + L1PA16 LINE L1 6095 6160 -6 207 0 0 0 chr2 6020668 6020691 -244667163 + (TG)n Simple_repeat Simple_repeat 1 23 0 1959 135 26 53 chr2 6020992 6021369 -244666485 - THE1C LTR MaLR -8 367 1 1361 212 50 32 chr2 6021386 6021763 -244666091 + L1MC4 LINE L1 7044 7427 -615 787 215 10 40 chr2 6021757 6021957 -244665897 - L1MC4 LINE L1 -961 7081 6888 * 287 276 48 0 chr2 6022075 6022180 -244665674 - MIR3 SINE MIR -9 199 90 252 86 0 0 chr2 6022981 6023016 -244664838 + (T)n Simple_repeat Simple_repeat 1 35 0 2300 103 0 0 chr2 6023834 6024135 -244663719 + AluY SINE Alu 1 301 -10 2977 96 8 0 chr2 6024267 6024663 -244663191 - MLT2A2 LTR ERVL -53 400 2 216 318 95 84 chr2 6025226 6025405 -244662449 - L2 LINE L2 -36 3236 3056 369 323 43 59 chr2 6025628 6025890 -244661964 + MIR SINE MIR 9 261 -1 41 58 0 0 chr2 6025978 6026047 -244661807 + AT_rich Low_complexity Low_complexity 1 69 0 215 339 64 53 chr2 6026732 6026897 -244660957 - MIR SINE MIR -75 133 8 236 231 0 0 chr2 6026962 6027014 -244660840 + L2 LINE L2 3262 3313 0 210 37 0 0 chr2 6028251 6028278 -244659576 + (TA)n Simple_repeat Simple_repeat 1 27 0 243 132 0 0 chr2 6028293 6028346 -244659508 - LTR66 LTR ERVL -169 441 389 401 0 20 0 chr2 6028874 6028923 -244658931 + (TG)n Simple_repeat Simple_repeat 2 51 0 212 260 80 30 chr2 6029361 6029461 -244658393 + MIR3 SINE MIR 93 197 -11 * 223 231 215 31 chr2 6029457 6029587 -244658267 - MIR SINE MIR -4 258 105 189 0 0 0 chr2 6030505 6030526 -244657328 + (TAA)n Simple_repeat Simple_repeat 2 22 0 28 0 0 0 chr2 6031151 6031179 -244656675 + AT_rich Low_complexity Low_complexity 1 28 0 876 245 20 0 chr2 6031205 6031401 -244656453 + L1ME1 LINE L1 5480 5679 -487 1188 153 0 10 chr2 6031405 6031607 -244656247 + L1PBa LINE L1 1 200 -6663 * 2673 123 33 16 chr2 6031581 6032067 -244655787 + L1PBa LINE L1 599 1135 -5728 10335 96 66 6 chr2 6032083 6033688 -244654166 + L1PBa LINE L1 1297 2996 -3866 875 212 16 11 chr2 6033688 6033877 -244653977 - LTR1 LTR ERV1 -593 192 3 14674 174 45 54 chr2 6033879 6036994 -244650860 - HUERS-P2 LTR ERV1 0 3088 2 2601 199 109 66 chr2 6036995 6037786 -244650068 - LTR1B LTR ERV1 0 826 2 5749 175 25 9 chr2 6037787 6039422 -244648432 + L1PB1 LINE L1 4132 5791 -360 207 143 57 29 chr2 6039437 6039542 -244648312 + (TA)n Simple_repeat Simple_repeat 1 108 0 470 45 45 30 chr2 6039580 6039634 -244648220 - L1PB1 LINE L1 -302 5849 5792 207 0 0 0 chr2 6039634 6039657 -244648197 + (TG)n Simple_repeat Simple_repeat 1 23 0 470 45 45 30 chr2 6039657 6039669 -244648185 - L1PB1 LINE L1 -359 5792 5782 455 127 70 14 chr2 6039686 6039951 -244647903 + (TA)n Simple_repeat Simple_repeat 1 250 -425 2908 63 11 8 chr2 6039951 6040315 -244647539 + L1PB1 LINE L1 5782 6146 -5 455 127 70 14 chr2 6040315 6040326 -244647528 + (TA)n Simple_repeat Simple_repeat 250 675 0 1347 249 95 19 chr2 6040332 6040805 -244647049 + L1ME1 LINE L1 5654 6162 -4 900 122 23 0 chr2 6040825 6040956 -244646898 + AluSx SINE Alu 1 134 -179 402 151 0 0 chr2 6040956 6041029 -244646825 + (TA)n Simple_repeat Simple_repeat 1 73 0 1089 141 0 40 chr2 6041032 6041209 -244646645 + AluSx SINE Alu 127 296 -16 249 33 0 0 chr2 6041894 6041924 -244645930 + (CA)n Simple_repeat Simple_repeat 1 30 0 215 288 38 0 chr2 6042226 6042306 -244645548 + (CAGA)n Simple_repeat Simple_repeat 2 84 0 287 291 50 64 chr2 6042952 6043093 -244644761 + L2 LINE L2 3134 3272 0 382 298 33 33 chr2 6043841 6043962 -244643892 - L2 LINE L2 -9 3304 3184 885 289 43 10 chr2 6044259 6044560 -244643294 + L2 LINE L2 1911 2221 -1093 356 306 20 14 chr2 6044579 6044726 -244643128 + L1MEc LINE L1 67 214 -6182 740 288 49 46 chr2 6045237 6045433 -244642421 + L1MEc LINE L1 658 852 -5353 2108 123 10 3 chr2 6045433 6045734 -244642120 + AluSq SINE Alu 1 303 -10 740 288 49 46 chr2 6045734 6046146 -244641708 + L1MEc LINE L1 852 1220 -4985 3686 138 57 7 chr2 6046179 6046794 -244641060 - Tigger4(Zombi) DNA MER2_type 0 2731 2086 560 152 235 38 chr2 6046791 6046923 -244640931 - Tigger4(Zombi) DNA MER2_type -2571 160 3 * 213 167 21 21 chr2 6046923 6046971 -244640883 + (CA)n Simple_repeat Simple_repeat 1 48 0 666 278 91 53 chr2 6047074 6047215 -244640639 + L1MEc LINE L1 1506 1640 -4756 832 207 5 0 chr2 6047215 6047403 -244640451 + L1MD1 LINE L1 6054 6242 0 666 278 91 53 chr2 6047403 6047587 -244640267 + L1MEc LINE L1 1640 1815 -4581 2133 142 0 0 chr2 6047587 6047896 -244639958 + AluSx SINE Alu 1 309 -3 666 278 91 53 chr2 6047896 6048349 -244639505 + L1MEc LINE L1 1815 2315 -4081 3082 229 56 11 chr2 6048578 6049342 -244638512 + L1M4b LINE L1 555 1353 -5506 2232 108 0 0 chr2 6049346 6049634 -244638220 + AluSc SINE Alu 1 288 -21 213 241 0 0 chr2 6049636 6049690 -244638164 + (TA)n Simple_repeat Simple_repeat 1 54 0 291 117 83 0 chr2 6049691 6049751 -244638103 + L1M4b LINE L1 1357 1421 -5438 321 159 0 0 chr2 6049951 6050014 -244637840 + (TG)n Simple_repeat Simple_repeat 1 63 0 21 36 0 0 chr2 6050889 6050917 -244636937 + AT_rich Low_complexity Low_complexity 1 28 0 197 377 85 31 chr2 6051101 6051231 -244636623 - MIR3 SINE MIR -6 202 66 3041 285 105 23 chr2 6052266 6052385 -244635469 + L1MB7 LINE L1 6 114 -6845 1868 148 65 0 chr2 6052385 6052676 -244635178 - AluSx SINE Alu -2 310 1 3041 285 105 23 chr2 6052676 6054777 -244633077 + L1MB7 LINE L1 114 2405 -4554 206 260 0 0 chr2 6054845 6054895 -244632959 + (TA)n Simple_repeat Simple_repeat 2 51 0 355 325 0 0 chr2 6054961 6055075 -244632779 - L1M4b LINE L1 -5344 1515 1402 2239 244 89 36 chr2 6055179 6055699 -244632155 + L1MB7 LINE L1 2560 3051 -3906 352 81 16 16 chr2 6055699 6055761 -244632093 + (TA)n Simple_repeat Simple_repeat 1 62 0 2239 244 89 36 chr2 6055761 6056660 -244631194 + L1MB7 LINE L1 3051 3999 -2958 1157 181 43 27 chr2 6056667 6056966 -244630888 + L1MA7 LINE L1 5988 6291 0 5193 229 77 26 chr2 6056995 6058370 -244629484 + L1MB7 LINE L1 4016 5319 -1676 234 0 0 0 chr2 6058370 6058396 -244629458 + (TC)n Simple_repeat Simple_repeat 1 26 0 * 240 100 0 0 chr2 6058395 6058435 -244629419 + (CA)n Simple_repeat Simple_repeat 1 40 0 5193 229 77 26 chr2 6058396 6059772 -244628082 + L1MB7 LINE L1 5319 6868 -127 3696 60 9 0 chr2 6059772 6060236 -244627618 - L1PA8 LINE L1 -4 6168 5701 358 196 0 0 chr2 6060236 6060328 -244627526 + L1MB8 LINE L1 6072 6163 -15 2091 155 63 24 chr2 6060574 6060987 -244626867 + MSTB1 LTR MaLR 4 432 0 24 0 0 0 chr2 6061429 6061453 -244626401 + AT_rich Low_complexity Low_complexity 1 24 0 198 314 65 46 chr2 6061802 6061955 -244625899 + MIR SINE MIR 81 236 -26 289 297 203 16 chr2 6062375 6062681 -244625173 - MLT1J1 LTR MaLR -24 422 60 207 0 0 0 chr2 6062939 6062962 -244624892 + (CA)n Simple_repeat Simple_repeat 2 24 0 216 0 0 0 chr2 6064555 6064579 -244623275 + (TC)n Simple_repeat Simple_repeat 1 24 0 * 252 0 0 0 chr2 6064578 6064606 -244623248 + (CA)n Simple_repeat Simple_repeat 1 28 0 195 42 0 0 chr2 6064605 6064629 -244623225 + (GA)n Simple_repeat Simple_repeat 2 25 0 * 23 0 0 0 chr2 6065211 6065234 -244622620 + AT_rich Low_complexity Low_complexity 1 23 0 2299 115 24 21 chr2 6066079 6066453 -244621401 + THE1C LTR MaLR 1 375 0 223 213 0 0 chr2 6068963 6069010 -244618844 + MER5B DNA MER1_type 130 176 -2 416 194 108 0 chr2 6069233 6069326 -244618528 + MER5A DNA MER1_type 4 106 -83 330 336 27 0 chr2 6069389 6069499 -244618355 + MER5B DNA MER1_type 1 113 -65 279 323 56 19 chr2 6072355 6072516 -244615338 + MIR SINE MIR 84 250 -12 * 769 318 25 8 chr2 6072460 6072705 -244615149 - MIR SINE MIR -6 256 8 1457 213 23 0 chr2 6073150 6073455 -244614399 - AluJo SINE Alu 0 312 1 261 375 83 0 chr2 6075553 6075673 -244612181 - L2 LINE L2 -1 3271 3142 521 305 46 6 chr2 6076301 6076475 -244611379 - MIR SINE MIR -16 246 66 366 263 37 26 chr2 6077268 6077458 -244610396 + LTR33A LTR ERVL 328 519 -4 1393 155 91 16 chr2 6077792 6078044 -244609810 - AluJb SINE Alu -16 296 26 351 278 0 0 chr2 6078683 6078755 -244609099 - MIR SINE MIR -92 116 45 671 258 42 24 chr2 6078848 6078910 -244608944 - MER58A DNA MER1_type -2203 217 158 2344 122 53 26 chr2 6078910 6079327 -244608527 - MSTA LTR MaLR 0 428 1 671 258 42 24 chr2 6079327 6079477 -244608377 - MER58A DNA MER1_type -2262 158 1 439 326 80 37 chr2 6079514 6079916 -244607938 - MLT1J LTR MaLR -57 454 36 191 111 0 0 chr2 6080176 6080203 -244607651 + MIR SINE MIR 118 144 -118 857 188 17 59 chr2 6081889 6082128 -244605726 + MSTB2 LTR MaLR 229 457 0 1094 197 55 108 chr2 6082174 6082555 -244605299 + MLT1A1 LTR MaLR 1 361 -4 253 364 29 29 chr2 6083266 6083406 -244604448 + MIR3 SINE MIR 16 155 -53 21 36 0 0 chr2 6083600 6083628 -244604226 + AT_rich Low_complexity Low_complexity 1 28 0 336 48 0 0 chr2 6083775 6083817 -244604037 + (GA)n Simple_repeat Simple_repeat 1 42 0 184 318 91 23 chr2 6086222 6086354 -244601500 - MIR SINE MIR -65 197 57 195 69 0 0 chr2 6087358 6087387 -244600467 + (CAGAGA)n Simple_repeat Simple_repeat 2 30 0 203 316 93 14 chr2 6087514 6087653 -244600201 + L2 LINE L2 2672 2821 -493 31 44 0 0 chr2 6088330 6088375 -244599479 + AT_rich Low_complexity Low_complexity 1 45 0 359 318 25 30 chr2 6088992 6089126 -244598728 - L1ME LINE L1 -404 5717 5583 1949 189 18 10 chr2 6089126 6089513 -244598341 + MLT1B LTR MaLR 1 390 0 359 318 25 30 chr2 6089513 6089576 -244598278 - L1ME LINE L1 -538 5583 5521 1809 162 40 30 chr2 6090381 6090752 -244597102 + THE1C LTR MaLR 1 375 0 21 57 0 0 chr2 6090784 6090819 -244597035 + AT_rich Low_complexity Low_complexity 1 35 0 206 382 35 18 chr2 6091002 6091172 -244596682 + L2 LINE L2 2828 3000 -272 318 318 96 36 chr2 6091207 6091487 -244596367 + HAL1b LINE L1 527 823 -525 1659 223 11 6 chr2 6091552 6091915 -244595939 + MLT1A1 LTR MaLR 1 365 0 258 294 16 16 chr2 6092307 6092433 -244595421 + (TA)n Simple_repeat Simple_repeat 2 127 0 294 277 47 84 chr2 6093435 6093648 -244594206 + MIR SINE MIR 8 212 -50 1602 165 92 9 chr2 6093767 6094083 -244593771 + MER2 DNA MER2_type 2 343 -1 26 0 0 0 chr2 6094634 6094660 -244593194 + AT_rich Low_complexity Low_complexity 1 26 0 238 269 222 9 chr2 6094801 6094909 -244592945 + MIR SINE MIR 48 178 -84 22 56 0 0 chr2 6094917 6094953 -244592901 + AT_rich Low_complexity Low_complexity 1 36 0 4453 132 1 12 chr2 6094953 6095673 -244592181 - L1PA13 LINE L1 -5 6158 5447 265 315 96 92 chr2 6095892 6096194 -244591660 - L2 LINE L2 -9 3304 2998 852 230 0 0 chr2 6096194 6096355 -244591499 + FRAM SINE Alu 1 161 -5 265 315 96 92 chr2 6096355 6096532 -244591322 - L2 LINE L2 -315 2998 2823 197 403 32 13 chr2 6096572 6096726 -244591128 - L2 LINE L2 -602 2712 2556 2152 130 0 3 chr2 6097331 6097639 -244590215 + AluSx SINE Alu 6 312 0 4989 177 25 6 chr2 6098533 6099425 -244588429 + MER49 LTR ERV1 8 916 -7 213 65 0 0 chr2 6100009 6100040 -244587814 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 353 162 0 14 chr2 6100610 6100684 -244587170 + GA-rich Low_complexity Low_complexity 4 76 0 365 255 10 10 chr2 6100917 6101015 -244586839 - MIR SINE MIR -118 144 47 212 281 88 44 chr2 6101639 6101753 -244586101 - MIR SINE MIR -74 188 70 21 0 0 0 chr2 6102235 6102256 -244585598 + AT_rich Low_complexity Low_complexity 1 21 0 1207 182 0 85 chr2 6102299 6102557 -244585297 + AluJo SINE Alu 1 236 -76 447 176 22 11 chr2 6102659 6102750 -244585104 + MSTC LTR MaLR 337 428 0 21 36 0 0 chr2 6104716 6104744 -244583110 + AT_rich Low_complexity Low_complexity 1 28 0 320 290 8 40 chr2 6104769 6104893 -244582961 - MIR SINE MIR -109 153 34 214 292 42 25 chr2 6107265 6107385 -244580469 + MIR SINE MIR 21 142 -120 1668 235 15 50 chr2 6108030 6108553 -244579301 + MLT1D LTR MaLR 1 505 0 22 0 0 0 chr2 6108690 6108712 -244579142 + AT_rich Low_complexity Low_complexity 1 22 0 272 97 42 14 chr2 6109278 6109350 -244578504 + (TG)n Simple_repeat Simple_repeat 1 74 0 344 196 27 20 chr2 6109376 6109524 -244578330 + (TG)n Simple_repeat Simple_repeat 1 149 0 225 353 17 8 chr2 6112548 6112667 -244575187 - MER5B DNA MER1_type -5 173 54 30 0 0 0 chr2 6112690 6112720 -244575134 + AT_rich Low_complexity Low_complexity 1 30 0 653 224 22 49 chr2 6112781 6112964 -244574890 - MER58C DNA MER1_type 0 215 38 231 291 13 0 chr2 6113080 6113159 -244574695 + MIR3 SINE MIR 124 203 -5 257 217 87 0 chr2 6113317 6113386 -244574468 + MIR SINE MIR 118 192 -70 410 264 47 27 chr2 6113440 6113588 -244574266 + MIR SINE MIR 65 215 -47 253 318 76 23 chr2 6114765 6114897 -244572957 - MIR SINE MIR -119 143 5 389 183 20 33 chr2 6116799 6116952 -244570902 + CT-rich Low_complexity Low_complexity 3 153 0 1492 127 18 9 chr2 6116954 6117175 -244570679 - AluSc SINE Alu -3 306 81 1789 162 6 34 chr2 6117175 6117496 -244570358 - AluJb SINE Alu 0 312 1 300 296 57 0 chr2 6117542 6117630 -244570224 - MIR SINE MIR -79 183 91 257 254 167 7 chr2 6117654 6117792 -244570062 - MIR SINE MIR -3 259 100 1768 154 89 17 chr2 6119050 6119400 -244568454 - THE1C LTR MaLR 0 375 1 24 0 0 0 chr2 6119541 6119565 -244568289 + AT_rich Low_complexity Low_complexity 1 24 0 448 270 68 0 chr2 6119712 6119860 -244567994 + MIR SINE MIR 4 161 -101 1132 215 99 52 chr2 6119893 6120477 -244567377 - LTR48B LTR ERV1 0 644 1 2040 179 82 131 chr2 6120532 6121293 -244566561 - LTR8A LTR ERV1 -4 723 1 2313 161 67 7 chr2 6122010 6122414 -244565440 - MSTA LTR MaLR 0 428 1 2129 195 20 66 chr2 6122668 6123143 -244564711 + MLT2B1 LTR ERVL 1 496 -24 512 43 29 0 chr2 6123143 6123213 -244564641 + (TCTA)n Simple_repeat Simple_repeat 2 73 0 2129 195 20 66 chr2 6123213 6123229 -244564625 + MLT2B1 LTR ERVL 496 468 -52 2424 123 22 6 chr2 6123229 6123587 -244564267 - THE1B LTR MaLR 0 364 1 2129 195 20 66 chr2 6123587 6123637 -244564217 + MLT2B1 LTR ERVL 467 518 -2 1934 152 22 26 chr2 6124570 6124924 -244562930 + MLT2A2 LTR ERVL 3 309 -144 1170 133 0 6 chr2 6125014 6125195 -244562659 + MLT2A2 LTR ERVL 274 453 0 2427 50 0 3 chr2 6126182 6126488 -244561366 + AluY SINE Alu 1 305 0 419 322 94 59 chr2 6126742 6127198 -244560656 - MLT1K LTR MaLR 0 588 117 2271 96 0 3 chr2 6128672 6128965 -244558889 - AluY SINE Alu -19 292 1 1923 67 8 4 chr2 6129602 6129855 -244557999 - L1PA7 LINE L1 0 6154 5901 267 264 33 0 chr2 6129877 6129968 -244557886 - MER5A DNA MER1_type -95 94 1 246 62 0 0 chr2 6130115 6130147 -244557707 + (A)n Simple_repeat Simple_repeat 1 32 0 376 200 109 0 chr2 6131328 6131438 -244556416 - MER20 DNA MER1_type -95 124 3 1295 132 80 0 chr2 6131444 6131657 -244556197 + MER30 DNA MER1_type 1 230 0 216 194 45 0 chr2 6131750 6131884 -244555970 + (TG)n Simple_repeat Simple_repeat 2 141 0 218 191 23 30 chr2 6131971 6132102 -244555752 + (TG)n Simple_repeat Simple_repeat 2 131 0 541 150 22 28 chr2 6132113 6132293 -244555561 + (TG)n Simple_repeat Simple_repeat 1 179 0 431 204 39 6 chr2 6132315 6132632 -244555222 + (TG)n Simple_repeat Simple_repeat 1 327 0 234 62 0 0 chr2 6133537 6133569 -244554285 + (TAA)n Simple_repeat Simple_repeat 1 32 0 201 156 0 0 chr2 6135074 6135106 -244552748 + CT-rich Low_complexity Low_complexity 2 33 0 33 0 0 0 chr2 6135545 6135578 -244552276 + AT_rich Low_complexity Low_complexity 1 33 0 440 281 31 40 chr2 6137675 6137920 -244549934 - MIR SINE MIR -15 247 4 2255 101 3 0 chr2 6138162 6138449 -244549405 + AluSc SINE Alu 1 288 -21 25 51 0 0 chr2 6139262 6139301 -244548553 + AT_rich Low_complexity Low_complexity 1 39 0 1958 133 3 7 chr2 6139351 6139636 -244548218 + MER1B DNA MER1_type 43 326 -13 3617 255 115 52 chr2 6139687 6141786 -244546068 - Charlie7 DNA MER1_type -139 2473 243 1845 185 25 33 chr2 6142140 6142507 -244545347 - MLT1A1 LTR MaLR 0 365 2 263 361 31 0 chr2 6143016 6143146 -244544708 - MIR SINE MIR -50 212 79 229 320 82 0 chr2 6143762 6143884 -244543970 + MIR SINE MIR 76 207 -55 183 190 40 20 chr2 6144518 6144618 -244543236 + (CA)n Simple_repeat Simple_repeat 1 102 0 386 218 45 0 chr2 6144638 6144794 -244543060 + (CA)n Simple_repeat Simple_repeat 1 163 0 185 158 132 0 chr2 6150565 6150603 -244537251 + MIR SINE MIR 81 123 -85 2387 134 8 21 chr2 6152493 6152873 -244534981 + THE1C LTR MaLR 1 375 0 205 284 142 45 chr2 6154685 6154819 -244533035 + L2 LINE L2 3166 3312 -1 228 325 13 0 chr2 6155795 6155872 -244531982 - MIR SINE MIR -108 154 77 199 220 7 50 chr2 6157034 6157175 -244530679 + GA-rich Low_complexity Low_complexity 2 136 0 243 285 146 8 chr2 6157692 6157815 -244530039 + L2 LINE L2 3132 3271 -1 229 301 12 0 chr2 6157984 6158067 -244529787 + MIR SINE MIR 111 194 -68 748 247 57 10 chr2 6158105 6158299 -244529555 - MLT1B LTR MaLR 0 467 265 329 281 9 9 chr2 6158299 6158413 -244529441 - MIR SINE MIR -132 130 17 794 196 87 4 chr2 6158484 6158709 -244529145 - MLT1B LTR MaLR -186 204 9 625 289 21 4 chr2 6158746 6158981 -244528873 + MIR SINE MIR 20 258 -4 352 242 77 0 chr2 6160577 6160668 -244527186 + MER63 DNA MER1_type 1 724 -112 567 203 99 81 chr2 6161067 6161289 -244526565 + HAL1 LINE L1 1 226 -2281 818 170 12 12 chr2 6161772 6162022 -244525832 + GA-rich Low_complexity Low_complexity 1 250 0 357 24 0 0 chr2 6162024 6162066 -244525788 + (GGAA)n Simple_repeat Simple_repeat 1 42 0 825 241 137 52 chr2 6162067 6162491 -244525363 - MLT1C LTR MaLR -4 463 4 237 259 12 25 chr2 6162494 6162575 -244525279 + GA-rich Low_complexity Low_complexity 3 82 0 1843 219 73 7 chr2 6162685 6163137 -244524717 + L1MB2 LINE L1 5686 6167 -4 406 83 0 17 chr2 6163439 6163499 -244524355 - L1PA13 LINE L1 -846 5458 5400 5025 90 1 13 chr2 6163499 6164197 -244523657 + L1PA13 LINE L1 5470 6161 -2 198 260 26 52 chr2 6164963 6165040 -244522814 - MIR3 SINE MIR -39 169 95 210 37 0 0 chr2 6165320 6165347 -244522507 + (CAGAGA)n Simple_repeat Simple_repeat 4 30 0 209 270 126 50 chr2 6166066 6166225 -244521629 - MIR3 SINE MIR -22 186 16 226 304 194 42 chr2 6166728 6166919 -244520935 + MIR SINE MIR 30 249 -13 399 306 136 71 chr2 6167412 6167978 -244519876 + L1MC4a LINE L1 5265 5867 -1941 1868 81 20 6 chr2 6168653 6169043 -244518811 - MLT2A2 LTR ERVL 0 453 1 515 294 0 0 chr2 6170128 6170291 -244517563 + MIR SINE MIR 95 257 -5 219 333 28 28 chr2 6170313 6170421 -244517433 - MIR SINE MIR -64 144 37 483 332 62 7 chr2 6170730 6171004 -244516850 - L1ME LINE L1 -307 5814 5526 661 123 0 25 chr2 6171154 6171276 -244516578 + (GGAA)n Simple_repeat Simple_repeat 1 119 0 199 274 32 0 chr2 6171314 6171376 -244516478 + MIR SINE MIR 159 222 -40 191 343 81 6 chr2 6171876 6172048 -244515806 + L2 LINE L2 2981 3165 -148 2025 130 33 20 chr2 6172151 6172452 -244515402 - AluSq SINE Alu -8 305 1 2586 71 21 0 chr2 6172527 6172865 -244514989 + L1P3 LINE L1 5361 5705 -467 219 319 8 50 chr2 6172866 6172985 -244514869 + L2 LINE L2 3180 3293 -20 327 301 64 13 chr2 6174076 6174232 -244513622 - MIR SINE MIR -62 200 37 450 83 0 42 chr2 6174300 6174372 -244513482 + MADE1 DNA Mariner 10 78 -2 346 252 48 29 chr2 6174374 6174477 -244513377 - L2 LINE L2 -36 3277 3173 196 320 39 39 chr2 6174785 6174963 -244512891 - L2 LINE L2 -578 2736 2559 295 233 63 47 chr2 6175262 6175348 -244512506 - MIR3 SINE MIR -53 155 68 28 0 0 0 chr2 6175416 6175444 -244512410 + AT_rich Low_complexity Low_complexity 1 28 0 299 333 9 0 chr2 6176306 6176411 -244511443 + MIR3 SINE MIR 67 172 -36 2195 112 0 3 chr2 6176928 6177223 -244510631 + AluSc SINE Alu 1 294 -15 2332 95 0 20 chr2 6177893 6178198 -244509656 + AluSg SINE Alu 1 299 -11 192 252 9 17 chr2 6178516 6178631 -244509223 + GA-rich Low_complexity Low_complexity 4 117 0 401 205 53 76 chr2 6178635 6178806 -244509048 + HAL1 LINE L1 1011 1177 -1330 819 284 192 15 chr2 6178838 6179296 -244508558 + L1ME1 LINE L1 36 574 -5822 1225 265 86 52 chr2 6179314 6180465 -244507389 + L1ME1 LINE L1 1091 6230 -5 337 159 63 0 chr2 6181118 6181181 -244506673 - MLT1A2 LTR MaLR 0 390 324 586 228 124 0 chr2 6181191 6181336 -244506518 + FRAM SINE Alu 4 166 0 562 250 6 6 chr2 6181336 6181516 -244506338 + GA-rich Low_complexity Low_complexity 1 180 0 519 227 4 9 chr2 6181539 6181687 -244506167 - MLT1A2 LTR MaLR -56 372 192 750 219 21 42 chr2 6181737 6181929 -244505925 - MLT1A2 LTR MaLR -186 188 1 392 269 85 28 chr2 6182025 6182290 -244505564 - L1ME LINE L1 -4685 1576 1107 1594 223 77 12 chr2 6182305 6182736 -244505118 - MLT1C LTR MaLR 0 467 1 2111 273 82 26 chr2 6182736 6183889 -244503965 - L1ME LINE L1 -4846 1234 14 568 309 73 25 chr2 6184540 6184932 -244502922 - MLT1J LTR MaLR -45 466 13 279 0 0 0 chr2 6185289 6185320 -244502534 + (CA)n Simple_repeat Simple_repeat 2 32 0 359 318 0 0 chr2 6185321 6185428 -244502426 - MER5B DNA MER1_type -71 107 1 1027 142 0 0 chr2 6185832 6185987 -244501867 - AluSx SINE Alu -1 311 157 585 111 0 0 chr2 6185987 6186068 -244501786 - AluSx SINE Alu -231 82 2 1962 146 7 0 chr2 6186100 6186403 -244501451 + AluJb SINE Alu 1 305 0 313 176 110 11 chr2 6186487 6186578 -244501276 - MLT1J LTR MaLR -38 473 374 32544 218 19 16 chr2 6186613 6195039 -244492815 - HUERS-P3 LTR ERV1 -224 8695 259 484 138 11 53 chr2 6195043 6195137 -244492717 - HUERS-P3 LTR ERV1 -6905 91 2 4856 136 44 3 chr2 6195155 6195914 -244491940 - LTR25 LTR ERV1 0 794 1 191 256 0 23 chr2 6196959 6197002 -244490852 - MIR3 SINE MIR -24 184 143 563 290 43 0 chr2 6198413 6198575 -244489279 - MIR SINE MIR -2 260 92 591 318 23 9 chr2 6198747 6198964 -244488890 + MIR SINE MIR 5 224 -38 304 357 84 0 chr2 6199158 6199301 -244488553 + MIR SINE MIR 20 174 -88 214 302 83 0 chr2 6199399 6199495 -244488359 - MIR SINE MIR -76 132 29 35 63 0 0 chr2 6200058 6200121 -244487733 + AT_rich Low_complexity Low_complexity 1 63 0 2271 112 0 0 chr2 6201203 6201499 -244486355 - AluSx SINE Alu -16 296 1 2243 54 0 0 chr2 6201908 6202168 -244485686 + AluY SINE Alu 39 298 -13 260 270 74 61 chr2 6203042 6203205 -244484649 - MIR SINE MIR -59 203 39 1625 147 120 78 chr2 6203294 6203341 -244484513 + MSTA LTR MaLR 3 47 -381 610 88 0 0 chr2 6203341 6203421 -244484433 - MADE1 DNA Mariner 0 80 1 1625 147 120 78 chr2 6203421 6203782 -244484072 + MSTA LTR MaLR 47 428 0 223 297 20 68 chr2 6203941 6204089 -244483765 + L2 LINE L2 2560 2700 -614 810 289 31 33 chr2 6204223 6204794 -244483060 + L1ME3A LINE L1 5458 6157 -13 327 295 29 7 chr2 6205103 6205242 -244482612 - L1ME LINE L1 -351 5811 5670 1499 162 63 36 chr2 6205564 6205867 -244481987 - AluJo SINE Alu -1 311 1 2214 65 7 4 chr2 6205875 6206150 -244481704 - AluY SINE Alu -1 310 35 451 332 53 66 chr2 6206172 6206709 -244481145 + L2 LINE L2 2698 3241 -72 2251 140 79 15 chr2 6206709 6207051 -244480803 + THE1B LTR MaLR 1 364 0 12522 89 11 1 chr2 6207051 6208614 -244479240 + THE1B-int LTR MaLR 1 1579 -1 2368 117 73 15 chr2 6208617 6208959 -244478895 + THE1B LTR MaLR 3 364 0 451 332 53 66 chr2 6208959 6209037 -244478817 + L2 LINE L2 3242 3307 -6 280 157 88 69 chr2 6209082 6209184 -244478670 + MIR SINE MIR 60 163 -99 324 48 0 0 chr2 6209343 6209385 -244478469 + (CA)n Simple_repeat Simple_repeat 2 43 0 409 283 108 42 chr2 6210452 6210692 -244477162 - MIR SINE MIR 0 262 7 355 323 137 50 chr2 6211230 6211611 -244476243 + L2 LINE L2 2834 3247 -25 661 284 85 21 chr2 6212375 6212611 -244475243 - MIR SINE MIR -11 251 1 180 375 39 48 chr2 6212803 6212907 -244474947 - MIR SINE MIR -87 121 19 322 291 151 71 chr2 6213414 6214022 -244473832 - L1M2 LINE L1 -5480 1369 713 550 265 110 82 chr2 6214752 6215242 -244472612 + Tigger8 DNA MER2_type 63 566 -100 1784 203 12 50 chr2 6215419 6215823 -244472031 - MLT1B LTR MaLR 0 390 2 393 261 130 52 chr2 6216443 6216766 -244471088 + L1M3 LINE L1 3103 3444 -2702 615 314 51 46 chr2 6217203 6217595 -244470259 + MER68 LTR ERV1 156 549 -13 180 111 0 0 chr2 6217600 6217627 -244470227 + (CA)n Simple_repeat Simple_repeat 1 27 0 500 230 100 53 chr2 6217745 6217994 -244469860 + L1M3 LINE L1 5183 5440 -728 2545 188 46 0 chr2 6218022 6218475 -244469379 + MER101 LTR ERV1 1 474 0 1948 174 43 57 chr2 6219646 6220142 -244467712 + MER31-int LTR ERV1 815 3120 -3211 567 270 56 30 chr2 6220073 6220343 -244467511 + LTR57-int LTR ERVL 1234 1510 -3833 * 473 263 71 25 chr2 6220385 6220583 -244467271 + MER31-int LTR ERV1 1711 1917 -3019 1223 188 32 73 chr2 6220671 6221177 -244466677 + MER31-int LTR ERV1 2052 3835 -2428 901 143 20 51 chr2 6221321 6221517 -244466337 + MER31-int LTR ERV1 3541 3730 -2868 1288 201 98 81 chr2 6221597 6222177 -244465677 + MER31-int LTR ERV1 3287 3501 -1514 2732 150 11 23 chr2 6222177 6222610 -244465244 + MSTA LTR MaLR 1 428 0 1288 201 98 81 chr2 6222610 6223197 -244464657 + MER31-int LTR ERV1 3501 4077 -938 262 169 56 61 chr2 6223218 6223366 -244464488 + MER31-int LTR ERV1 5200 5397 -934 534 229 21 21 chr2 6223375 6223519 -244464335 + MER31-int LTR ERV1 4259 4402 -534 381 305 71 38 chr2 6224990 6225202 -244462652 - MIR SINE MIR -6 256 35 942 260 66 3 chr2 6227122 6227410 -244460444 - L1ME3A LINE L1 -2 6168 5863 204 310 150 0 chr2 6227442 6227542 -244460312 + L2 LINE L2 2541 2655 -659 204 315 14 27 chr2 6227988 6228061 -244459793 + L2 LINE L2 3201 3272 0 330 275 62 83 chr2 6228091 6228283 -244459571 + MIR SINE MIR 19 204 -58 30 45 0 0 chr2 6228298 6228342 -244459512 + AT_rich Low_complexity Low_complexity 1 44 0 4176 113 28 2 chr2 6228457 6229022 -244458832 - LTR19B LTR ERV1 0 580 1 53 0 0 0 chr2 6229051 6229104 -244458750 + AT_rich Low_complexity Low_complexity 1 53 0 267 224 24 88 chr2 6229519 6229644 -244458210 + MER94 DNA DNA 1 117 -17 331 331 63 0 chr2 6229684 6229826 -244458028 + MIR SINE MIR 46 196 -66 340 294 133 45 chr2 6230208 6230494 -244457360 + HAL1 LINE L1 593 903 -1604 1228 275 144 29 chr2 6230495 6231243 -244456611 + HAL1 LINE L1 928 1761 -746 253 141 109 43 chr2 6231335 6231427 -244456427 + LTR33A LTR ERVL 360 457 -66 231 316 59 59 chr2 6232104 6232240 -244455614 + MER5B DNA MER1_type 43 178 0 23 54 0 0 chr2 6233117 6233154 -244454700 + AT_rich Low_complexity Low_complexity 1 37 0 750 316 56 22 chr2 6233269 6233592 -244454262 - MER68 LTR ERV1 0 562 229 202 331 8 58 chr2 6236258 6236379 -244451475 - L2 LINE L2 -223 3049 2935 22 56 0 0 chr2 6239344 6239380 -244448474 + AT_rich Low_complexity Low_complexity 1 36 0 293 305 102 11 chr2 6239546 6239733 -244448121 + L1ME LINE L1 5518 5721 -400 2390 75 3 0 chr2 6239735 6240059 -244447795 + AluY SINE Alu 1 311 0 22 0 0 0 chr2 6240622 6240644 -244447210 + AT_rich Low_complexity Low_complexity 1 22 0 197 306 124 16 chr2 6240675 6240796 -244447058 - MIR SINE MIR -10 252 119 394 197 271 0 chr2 6240883 6241005 -244446849 - MER5A DNA MER1_type -7 182 28 1143 252 72 6 chr2 6241049 6241367 -244446487 + MER58B DNA MER1_type 2 340 -1 23 33 0 0 chr2 6241971 6242001 -244445853 + AT_rich Low_complexity Low_complexity 1 30 0 1387 188 90 10 chr2 6242708 6242996 -244444858 - AluJb SINE Alu -1 311 1 205 156 0 0 chr2 6243560 6243592 -244444262 + (CATG)n Simple_repeat Simple_repeat 3 34 0 2211 99 10 0 chr2 6245972 6246264 -244441590 + AluSg SINE Alu 6 300 -10 186 71 0 0 chr2 6246531 6246559 -244441295 + (CCA)n Simple_repeat Simple_repeat 2 29 0 206 196 18 18 chr2 6247019 6247075 -244440779 + (TATATG)n Simple_repeat Simple_repeat 1 56 0 20123 104 6 47 chr2 6247075 6252759 -244435095 - L1PA7 LINE L1 -12 6142 834 2234 129 0 0 chr2 6252759 6253069 -244434785 - AluSg SINE Alu 0 310 1 20123 104 6 47 chr2 6253069 6253860 -244433994 - L1PA7 LINE L1 -5320 834 12 310 230 111 0 chr2 6253983 6254118 -244433736 - L1ME4a LINE L1 0 6121 5972 495 0 0 0 chr2 6254391 6254446 -244433408 + (CA)n Simple_repeat Simple_repeat 2 56 0 1300 234 101 3 chr2 6254795 6255132 -244432722 - MLT1A2 LTR MaLR -4 370 1 198 187 103 14 chr2 6255816 6255881 -244431973 + MIR SINE MIR 82 214 -48 235 433 55 16 chr2 6256151 6256278 -244431576 - L2 LINE L2 -18 3254 3123 2443 117 6 6 chr2 6256463 6256813 -244431041 + L1PB1 LINE L1 5801 6150 -1 281 328 41 16 chr2 6257821 6257943 -244429911 - MIR SINE MIR -34 228 104 297 0 0 0 chr2 6258602 6258635 -244429219 + (TG)n Simple_repeat Simple_repeat 2 34 0 310 269 13 0 chr2 6259038 6259116 -244428738 - LTR16A LTR ERVL 0 450 372 298 210 25 25 chr2 6259819 6259900 -244427954 - MLT1J1 LTR MaLR -2 444 364 255 367 0 0 chr2 6260372 6260451 -244427403 + MIR3 SINE MIR 109 187 -21 252 313 111 0 chr2 6260523 6260622 -244427232 - L2 LINE L2 -1 3271 3162 2809 143 22 13 chr2 6260772 6260860 -244426994 - MLT1C LTR MaLR 0 467 381 2475 157 80 46 chr2 6260860 6260900 -244426954 - MLT2B2 LTR ERVL 0 515 478 415 32 16 16 chr2 6260900 6260962 -244426892 + (TAGA)n Simple_repeat Simple_repeat 2 63 0 2475 157 80 46 chr2 6260962 6261419 -244426435 - MLT2B2 LTR ERVL -37 478 1 2809 143 22 13 chr2 6261419 6261779 -244426075 - MLT1C LTR MaLR -86 381 15 2529 110 42 14 chr2 6262005 6262359 -244425495 - THE1B LTR MaLR 0 364 1 21 0 0 0 chr2 6262675 6262696 -244425158 + AT_rich Low_complexity Low_complexity 1 21 0 2405 83 6 3 chr2 6262771 6263083 -244424771 - AluSp SINE Alu 0 313 1 197 194 0 0 chr2 6263516 6263552 -244424302 - MIR SINE MIR -9 253 218 810 238 0 0 chr2 6264551 6264719 -244423135 - AluJb SINE Alu -14 298 131 412 271 142 7 chr2 6264720 6264875 -244422979 - MIR SINE MIR -69 193 18 34 84 0 0 chr2 6265558 6265641 -244422213 + GC_rich Low_complexity Low_complexity 1 83 0 22 70 0 0 chr2 6265748 6265791 -244422063 + GC_rich Low_complexity Low_complexity 1 43 0 1507 172 46 14 chr2 6266048 6266333 -244421521 + AluJb SINE Alu 1 294 -18 306 0 0 0 chr2 6268596 6268630 -244419224 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 379 277 13 43 chr2 6269487 6269572 -244418282 + L1ME LINE L1 5510 5565 -556 1902 145 35 0 chr2 6269572 6269861 -244417993 - AluSx SINE Alu -13 299 1 379 277 13 43 chr2 6269861 6269932 -244417922 + L1ME LINE L1 5565 5637 -484 2330 217 39 41 chr2 6269961 6270621 -244417233 + L1M4c LINE L1 1238 1896 -4488 1535 103 0 0 chr2 6270627 6270821 -244417033 + AluSq SINE Alu 1 194 -119 22 0 0 0 chr2 6271598 6271620 -244416234 + AT_rich Low_complexity Low_complexity 1 22 0 2662 34 0 0 chr2 6271658 6271954 -244415900 - AluY SINE Alu -15 296 1 443 100 0 133 chr2 6272520 6272610 -244415244 + AluSg/x SINE Alu 218 295 -17 421 197 174 76 chr2 6273710 6273842 -244414012 - MER5A DNA MER1_type -32 157 13 221 314 128 0 chr2 6274181 6274267 -244413587 - MIR SINE MIR -64 144 48 3321 145 41 38 chr2 6274427 6274940 -244412914 - L1MB2 LINE L1 -270 5901 5384 2349 99 3 0 chr2 6274940 6275242 -244412612 - AluSg SINE Alu -7 303 1 3321 145 41 38 chr2 6275242 6275368 -244412486 - L1MB2 LINE L1 -787 5384 5260 835 172 90 0 chr2 6275368 6275513 -244412341 - AluJb SINE Alu -9 303 146 1658 158 0 28 chr2 6275520 6275805 -244412049 - AluJb SINE Alu -23 289 13 923 239 18 5 chr2 6275809 6276031 -244411823 - L1MB2 LINE L1 -871 5275 5051 1447 68 16 5 chr2 6276373 6276564 -244411290 + AluY SINE Alu 103 295 -16 1547 180 34 24 chr2 6277190 6277485 -244410369 + AluJo SINE Alu 1 298 -14 897 265 32 13 chr2 6277488 6277797 -244410057 + L1M4c LINE L1 2445 2759 -3623 1265 147 44 5 chr2 6278425 6278629 -244409225 + AluJb SINE Alu 1 212 -100 2228 112 3 0 chr2 6278629 6278925 -244408929 - AluSx SINE Alu -15 297 1 2107 125 3 3 chr2 6279544 6279841 -244408013 - AluSx SINE Alu -15 297 1 1246 204 91 18 chr2 6280484 6280759 -244407095 - AluJb SINE Alu -17 295 1 2109 86 47 0 chr2 6280898 6281176 -244406678 - AluSq SINE Alu -22 291 1 24 0 0 0 chr2 6281605 6281629 -244406225 + AT_rich Low_complexity Low_complexity 1 24 0 2144 96 20 20 chr2 6281931 6282232 -244405622 + AluSc SINE Alu 1 301 -8 1083 165 0 0 chr2 6282233 6282403 -244405451 + AluSg/x SINE Alu 135 304 -8 247 237 85 0 chr2 6282883 6282957 -244404897 + MLT1G LTR MaLR 223 311 -244 677 307 158 49 chr2 6283462 6283976 -244403878 + L3 LINE CR1 910 1479 -98 185 277 0 46 chr2 6284038 6284103 -244403751 + L3b LINE CR1 1522 1583 0 236 169 135 34 chr2 6284729 6284818 -244403036 - L1PA11 LINE L1 0 6174 6077 2066 197 163 27 chr2 6284820 6284922 -244402932 - Charlie1 DNA MER1_type -353 2408 2321 2323 103 3 6 chr2 6284922 6285234 -244402620 - AluSx SINE Alu -1 311 1 2066 197 163 27 chr2 6285234 6285426 -244402428 - Charlie1 DNA MER1_type -440 2321 2157 2150 140 3 3 chr2 6285426 6285733 -244402121 - AluSx SINE Alu -5 307 1 2066 197 163 27 chr2 6285733 6285932 -244401922 - Charlie1 DNA MER1_type -604 2157 1987 2073 122 10 16 chr2 6285932 6286243 -244401611 - AluSx SINE Alu -3 309 1 2066 197 163 27 chr2 6286243 6286421 -244401433 - Charlie1 DNA MER1_type -774 1987 1643 505 103 0 51 chr2 6286743 6286821 -244401033 - AluJo SINE Alu -17 295 222 771 166 0 58 chr2 6286891 6287030 -244400824 + FLAM_C SINE Alu 1 131 -2 2288 110 0 3 chr2 6287218 6287528 -244400326 - AluSc SINE Alu 0 309 1 1171 150 87 5 chr2 6287546 6287753 -244400101 - AluJo SINE Alu -88 224 1 259 154 0 0 chr2 6288296 6288335 -244399519 - Alu SINE Alu -261 39 1 314 262 267 11 chr2 6288570 6288748 -244399106 + MIR SINE MIR 4 228 -34 794 250 65 22 chr2 6288800 6289032 -244398822 + MIR SINE MIR 20 261 -1 867 173 0 0 chr2 6289121 6289254 -244398600 + FLAM_C SINE Alu 1 133 0 2230 95 3 0 chr2 6290606 6290891 -244396963 - AluSx SINE Alu -26 286 1 530 309 87 17 chr2 6291033 6291263 -244396591 + MIR SINE MIR 14 259 -3 207 282 42 0 chr2 6291411 6291482 -244396372 + (TATATG)n Simple_repeat Simple_repeat 3 76 0 2263 118 0 0 chr2 6291858 6292164 -244395690 - AluSx SINE Alu -6 306 1 296 215 108 46 chr2 6294321 6294451 -244393403 + MIR SINE MIR 88 225 -37 2153 116 10 0 chr2 6294617 6294911 -244392943 - AluSg SINE Alu -13 297 1 40 67 0 0 chr2 6295002 6295077 -244392777 + AT_rich Low_complexity Low_complexity 1 75 0 2206 123 3 0 chr2 6295992 6296300 -244391554 - AluSx SINE Alu -3 309 1 192 97 0 0 chr2 6296860 6296891 -244390963 + (CAGAGA)n Simple_repeat Simple_repeat 1 31 0 2357 97 0 0 chr2 6296902 6297201 -244390653 - AluSg SINE Alu -11 299 1 1345 148 145 28 chr2 6297940 6298264 -244389590 + L1MB5 LINE L1 5813 6174 0 248 252 84 37 chr2 6298425 6298532 -244389322 - L2 LINE L2 -862 2452 2341 408 214 143 9 chr2 6298714 6298826 -244389028 - MER94 DNA DNA -1 133 7 206 319 0 14 chr2 6299054 6299123 -244388731 - L3 LINE CR1 -1 1576 1509 23 0 0 0 chr2 6300091 6300114 -244387740 + AT_rich Low_complexity Low_complexity 1 23 0 43 20 0 0 chr2 6300589 6300639 -244387215 + AT_rich Low_complexity Low_complexity 1 50 0 2505 86 0 0 chr2 6302126 6302439 -244385415 + AluSq SINE Alu 1 313 0 755 289 50 11 chr2 6302452 6302732 -244385122 + HAL1 LINE L1 1637 1927 -580 513 281 105 4 chr2 6302968 6303196 -244384658 + HAL1 LINE L1 2050 2300 -207 25 0 0 0 chr2 6303970 6303995 -244383859 + AT_rich Low_complexity Low_complexity 1 25 0 2479 84 0 3 chr2 6304489 6304799 -244383055 + AluY SINE Alu 1 309 -2 2099 100 3 17 chr2 6305804 6306093 -244381761 - AluSg SINE Alu -23 287 3 1233 154 43 39 chr2 6306159 6306393 -244381461 - AluJo SINE Alu -23 289 55 230 161 0 54 chr2 6307281 6307337 -244380517 - MER5B DNA MER1_type 0 178 126 2106 136 10 3 chr2 6307346 6307656 -244380198 + AluSx SINE Alu 1 312 0 564 242 62 36 chr2 6308250 6308444 -244379410 + MIR SINE MIR 63 261 -1 182 36 0 36 chr2 6309854 6309882 -244377972 + (CCCTG)n Simple_repeat Simple_repeat 4 30 0 2526 30 40 0 chr2 6310488 6310784 -244377070 + AluY SINE Alu 1 308 -3 253 281 92 30 chr2 6311421 6311585 -244376269 - L2 LINE L2 -467 2847 2674 207 333 10 30 chr2 6312874 6312973 -244374881 + MIR3 SINE MIR 78 174 -34 224 331 37 22 chr2 6313449 6313585 -244374269 - MIR SINE MIR -77 185 48 204 307 18 36 chr2 6313695 6313861 -244373993 - L2 LINE L2 -167 3105 2943 2527 77 0 0 chr2 6314619 6314930 -244372924 - AluY SINE Alu 0 311 1 718 223 99 21 chr2 6317636 6317869 -244369985 - MLT1C LTR MaLR -213 254 4 180 77 0 0 chr2 6317877 6317903 -244369951 + (CA)n Simple_repeat Simple_repeat 1 26 0 339 256 116 43 chr2 6317971 6318227 -244369627 - MLT1L LTR MaLR -7 608 235 276 246 25 68 chr2 6318600 6318718 -244369136 + L2 LINE L2 3156 3268 -4 1148 196 107 0 chr2 6319607 6319877 -244367977 + MER33 DNA MER1_type 5 303 -21 21 36 0 0 chr2 6321497 6321525 -244366329 + AT_rich Low_complexity Low_complexity 1 28 0 256 176 14 14 chr2 6322530 6322604 -244365250 + (TA)n Simple_repeat Simple_repeat 1 74 0 1942 163 0 7 chr2 6322605 6322900 -244364954 - AluJb SINE Alu -19 293 1 2189 247 40 16 chr2 6323687 6324420 -244363434 - L1M4 LINE L1 -3250 2896 2147 22 0 0 0 chr2 6325680 6325702 -244362152 + AT_rich Low_complexity Low_complexity 1 22 0 612 278 87 70 chr2 6325738 6326396 -244361458 - L1MC4a LINE L1 -1885 5923 5255 227 202 319 0 chr2 6326784 6326878 -244360976 + MIR SINE MIR 19 142 -120 580 289 100 39 chr2 6326975 6327415 -244360439 + L2 LINE L2 438 904 -2410 189 279 132 37 chr2 6327415 6327551 -244360303 + L2 LINE L2 2051 2199 -1115 208 291 35 64 chr2 6327898 6328039 -244359815 + L2 LINE L2 2435 2571 -743 287 283 168 29 chr2 6328134 6328307 -244359547 + L2 LINE L2 2960 3156 -157 245 233 0 23 chr2 6328307 6328393 -244359461 + (CATA)n Simple_repeat Simple_repeat 4 87 0 378 0 0 0 chr2 6328849 6328891 -244358963 + (TG)n Simple_repeat Simple_repeat 2 43 0 233 0 62 0 chr2 6330231 6330263 -244357591 + (TCCCC)n Simple_repeat Simple_repeat 2 35 0 2391 78 10 0 chr2 6330263 6330558 -244357296 - AluSq SINE Alu -15 298 1 4578 205 40 24 chr2 6330568 6332349 -244355505 - L1MB7 LINE L1 -1 6419 4619 394 290 120 4 chr2 6332342 6332618 -244355236 - L1MB7 LINE L1 -3898 2486 2179 * 196 247 124 21 chr2 6333452 6333549 -244354305 - L2 LINE L2 -4 3268 3162 428 273 132 18 chr2 6333702 6334131 -244353723 - L2 LINE L2 -219 3094 2615 1628 297 163 31 chr2 6334398 6334714 -244353140 - L2 LINE L2 -653 2661 2388 2200 112 0 0 chr2 6334714 6334999 -244352855 + AluSq SINE Alu 1 285 -28 1628 297 163 31 chr2 6334999 6336273 -244351581 - L2 LINE L2 -926 2388 861 195 42 0 0 chr2 6337007 6337031 -244350823 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2037 232 142 79 chr2 6338103 6339545 -244348309 + Charlie2a DNA MER1_type 1079 2611 -251 278 281 31 23 chr2 6339609 6339737 -244348117 + Charlie2a DNA MER1_type 2718 2846 -16 191 371 95 0 chr2 6340499 6340604 -244347250 - MIR SINE MIR -60 148 34 231 114 0 0 chr2 6341386 6341421 -244346433 + (TCCCC)n Simple_repeat Simple_repeat 4 38 0 25 0 0 0 chr2 6341833 6341858 -244345996 + AT_rich Low_complexity Low_complexity 1 25 0 213 171 24 0 chr2 6341939 6341980 -244345874 + (TTA)n Simple_repeat Simple_repeat 2 43 0 1414 277 110 76 chr2 6342334 6345155 -244342699 - L1ME3 LINE L1 -290 5876 2892 2205 99 0 7 chr2 6345155 6345448 -244342406 + AluSq SINE Alu 1 291 -22 1414 277 110 76 chr2 6345448 6346128 -244341726 - L1ME3 LINE L1 -3274 2892 2237 1607 228 40 33 chr2 6351450 6351875 -244335979 - MSTC LTR MaLR 0 428 1 216 97 0 0 chr2 6352969 6353000 -244334854 + (TG)n Simple_repeat Simple_repeat 2 32 0 191 321 84 38 chr2 6353437 6353568 -244334286 - L2 LINE L2 -9 3263 3127 1521 223 66 85 chr2 6353938 6354562 -244333292 - LTR9 LTR ERV1 0 612 1 215 267 0 33 chr2 6355647 6355707 -244332147 + CT-rich Low_complexity Low_complexity 5 62 0 6899 31 8 0 chr2 6356187 6356991 -244330863 + L1PA3 LINE L1 5344 6153 -2 576 237 129 42 chr2 6359522 6359809 -244328045 + LTR16C LTR ERVL 180 491 0 194 271 0 0 chr2 6361129 6361177 -244326677 - MIR SINE MIR -37 225 178 1882 180 22 65 chr2 6361190 6361591 -244326263 + MLT1B LTR MaLR 1 384 -6 1650 153 65 48 chr2 6361603 6361772 -244326082 + MER46B DNA MER2_type 1 166 -2565 2137 94 10 0 chr2 6361772 6362071 -244325783 - AluY SINE Alu -9 302 1 1650 153 65 48 chr2 6362071 6362158 -244325696 + MER46B DNA MER2_type 166 143 -2588 2319 119 19 35 chr2 6362158 6362528 -244325326 + THE1B LTR MaLR 1 364 0 1650 153 65 48 chr2 6362528 6362622 -244325232 + MER46B DNA MER2_type 142 233 -3 338 285 51 7 chr2 6362625 6362762 -244325092 - MIR SINE MIR -108 154 12 646 247 58 49 chr2 6364949 6365192 -244322662 + MIR SINE MIR 15 259 -3 912 254 28 0 chr2 6365749 6365966 -244321888 + MER58A DNA MER1_type 2 224 0 603 226 161 30 chr2 6366308 6366538 -244321316 + MIR SINE MIR 3 262 0 24 0 0 0 chr2 6366845 6366869 -244320985 + AT_rich Low_complexity Low_complexity 1 24 0 2031 131 66 26 chr2 6367066 6367416 -244320438 - THE1B LTR MaLR 0 364 1 1672 174 0 10 chr2 6367552 6367851 -244320003 + AluJb SINE Alu 1 296 -16 1333 256 125 17 chr2 6367891 6368372 -244319482 - L1MC4a LINE L1 -1883 5925 5393 189 136 16 56 chr2 6368569 6368694 -244319160 + (TA)n Simple_repeat Simple_repeat 1 120 0 262 294 59 54 chr2 6368949 6369214 -244318640 - L1MC/D LINE L1 -446 5675 5444 267 356 8 0 chr2 6369215 6369333 -244318521 - MIR SINE MIR -57 151 33 400 267 50 69 chr2 6369702 6369904 -244317950 - L2 LINE L2 -5 3308 3111 338 326 45 2 chr2 6371716 6371835 -244316019 + MIR SINE MIR 38 157 -51 1603 164 60 38 chr2 6371836 6372201 -244315653 - THE1C LTR MaLR 0 375 3 9728 130 12 38 chr2 6372203 6373823 -244314031 - THE1C-int LTR MaLR 0 1580 3 1763 151 37 45 chr2 6373825 6374203 -244313651 - THE1C LTR MaLR 0 375 1 554 304 81 26 chr2 6375798 6376071 -244311783 + L2 LINE L2 2358 2645 -669 434 316 27 32 chr2 6376111 6376298 -244311556 + L2 LINE L2 3089 3274 -39 2324 90 0 3 chr2 6376302 6376613 -244311241 - AluSg SINE Alu 0 310 1 180 0 0 0 chr2 6377282 6377302 -244310552 + (T)n Simple_repeat Simple_repeat 1 20 0 2216 83 0 7 chr2 6377682 6377982 -244309872 - AluY SINE Alu -13 298 1 279 327 27 9 chr2 6378155 6378265 -244309589 - MIR SINE MIR -55 153 42 1751 210 87 2 chr2 6380176 6380591 -244307263 - L1MC3 LINE L1 -28 7757 7308 274 197 57 90 chr2 6380710 6380832 -244307022 - MLT1F1 LTR MaLR -437 130 13 3615 199 96 29 chr2 6380832 6381879 -244305975 - L1MC3 LINE L1 -710 7075 5893 639 217 71 11 chr2 6381894 6382078 -244305776 - L1MC1 LINE L1 -5 6328 6134 1098 205 29 29 chr2 6382085 6382358 -244305496 - MLT1A2 LTR MaLR -5 369 97 348 24 0 0 chr2 6382394 6382435 -244305419 + (CA)n Simple_repeat Simple_repeat 2 42 0 287 78 69 29 chr2 6382439 6382541 -244305313 + (TA)n Simple_repeat Simple_repeat 1 106 0 297 0 0 0 chr2 6382556 6382589 -244305265 + (CA)n Simple_repeat Simple_repeat 2 34 0 241 240 133 27 chr2 6382615 6382690 -244305164 - MLT1A2 LTR MaLR -304 86 4 2754 174 30 8 chr2 6382690 6383220 -244304634 - L1MC1 LINE L1 -196 6137 5590 397 272 30 53 chr2 6383561 6383730 -244304124 + MIR SINE MIR 67 231 -31 330 135 29 144 chr2 6383741 6383845 -244304009 - L1MC4 LINE L1 -1341 6981 1980 586 257 27 48 chr2 6384174 6384361 -244303493 - MER5A DNA MER1_type 0 189 7 208 274 50 69 chr2 6386019 6386130 -244301724 - MIR SINE MIR -97 111 2 2125 156 77 31 chr2 6387349 6387864 -244299990 - MLT2A2 LTR ERVL 0 554 1 328 263 135 0 chr2 6387877 6388010 -244299844 - MIR SINE MIR -14 248 98 1774 105 4 8 chr2 6388496 6388754 -244299100 + AluSc SINE Alu 39 295 -14 1684 174 43 40 chr2 6389684 6390099 -244297755 + L1MA9 LINE L1 5903 6311 -1 196 263 100 50 chr2 6390466 6390546 -244297308 + L2 LINE L2 3169 3252 -20 307 229 280 8 chr2 6391559 6391677 -244296177 + MIR SINE MIR 20 169 -93 205 151 38 0 chr2 6392810 6392863 -244294991 + (TA)n Simple_repeat Simple_repeat 2 56 0 2330 88 0 0 chr2 6393004 6393310 -244294544 + AluSq SINE Alu 1 306 -7 225 0 73 24 chr2 6393328 6393369 -244294485 + (TAAAA)n Simple_repeat Simple_repeat 3 45 0 1928 153 0 0 chr2 6393383 6393684 -244294170 + AluJo SINE Alu 3 303 -9 448 256 125 57 chr2 6393815 6393991 -244293863 + MIR SINE MIR 49 236 -26 206 294 147 71 chr2 6394227 6394465 -244293389 - L2 LINE L2 0 3272 3017 495 212 30 0 chr2 6394602 6394701 -244293153 + Tigger3b DNA MER2_type 1 102 -1129 * 4450 130 50 84 chr2 6394699 6395690 -244292164 + Tigger3b DNA MER2_type 274 1231 0 257 256 60 51 chr2 6395953 6396070 -244291784 + MIR3 SINE MIR 52 169 -39 292 358 73 0 chr2 6401954 6402077 -244285777 - L2 LINE L2 -20 3252 3121 291 316 52 29 chr2 6402200 6402336 -244285518 - MIR SINE MIR -113 149 11 555 283 46 5 chr2 6403138 6403357 -244284497 - L1MA9 LINE L1 -38 6274 6047 298 372 141 5 chr2 6403419 6403610 -244284244 + MIR SINE MIR 25 241 -21 192 343 15 0 chr2 6404244 6404311 -244283543 - MIR SINE MIR -1 261 194 224 307 107 60 chr2 6405137 6405287 -244282567 - MIR SINE MIR -13 249 93 412 313 79 18 chr2 6405886 6406116 -244281738 + MIR SINE MIR 13 252 -10 299 192 0 0 chr2 6406230 6406282 -244281572 + L2 LINE L2 3261 3312 -1 505 95 0 0 chr2 6408043 6408117 -244279737 + FLAM_A SINE Alu 69 142 0 192 97 0 0 chr2 6409289 6409320 -244278534 + (T)n Simple_repeat Simple_repeat 1 31 0 581 246 102 60 chr2 6410911 6411126 -244276728 + MER58A DNA MER1_type 1 224 0 261 254 17 0 chr2 6412838 6412897 -244274957 - L2 LINE L2 -18 3295 3236 275 210 16 0 chr2 6413967 6414029 -244273825 + Charlie8 DNA MER1_type 91 153 -2264 494 286 17 17 chr2 6414565 6414740 -244273114 + MARNA DNA Mariner 177 351 -235 191 393 0 11 chr2 6414748 6414837 -244273017 - MIR SINE MIR -8 254 167 377 281 12 69 chr2 6414944 6415104 -244272750 - MIR SINE MIR 0 262 112 201 250 0 0 chr2 6416180 6416240 -244271614 + T-rich Low_complexity Low_complexity 1 60 0 429 277 50 0 chr2 6416802 6416921 -244270933 - MLT1B LTR MaLR -2 388 264 2139 133 7 0 chr2 6417377 6417686 -244270168 + AluSx SINE Alu 1 311 -1 222 194 0 104 chr2 6420408 6420475 -244267379 + MER5B DNA MER1_type 109 168 -10 456 19 0 0 chr2 6422240 6422293 -244265561 + (TG)n Simple_repeat Simple_repeat 2 54 0 3499 121 13 26 chr2 6422633 6423164 -244264690 - MER1A DNA MER1_type 0 527 4 385 305 68 28 chr2 6423241 6423418 -244264436 - L2 LINE L2 -9 3304 3121 270 288 62 27 chr2 6423389 6423535 -244264319 - L2 LINE L2 -445 2869 2719 * 315 303 63 0 chr2 6423784 6423926 -244263928 - MER58A DNA MER1_type -31 193 43 528 193 37 9 chr2 6423926 6424035 -244263819 + L1MB8 LINE L1 6060 6171 -7 1443 214 49 45 chr2 6424382 6424831 -244263023 - MLT1C LTR MaLR -16 451 1 359 262 104 0 chr2 6425118 6425350 -244262504 - MLT1G1 LTR MaLR -12 583 236 688 90 0 0 chr2 6426179 6426268 -244261586 + AluSg/x SINE Alu 206 294 -15 237 213 133 0 chr2 6427396 6427471 -244260383 + MER112 DNA MER1_type 145 229 -31 182 306 94 12 chr2 6428820 6428905 -244258949 + MIR3 SINE MIR 110 201 -7 285 252 37 47 chr2 6429962 6430069 -244257785 - MIR3 SINE MIR -6 202 97 200 339 116 0 chr2 6430631 6430743 -244257111 + L2 LINE L2 3136 3260 -12 214 314 0 29 chr2 6430791 6430861 -244256993 + GA-rich Low_complexity Low_complexity 4 71 0 * 812 213 26 6 chr2 6430841 6431156 -244256698 + (TGGA)n Simple_repeat Simple_repeat 1 321 0 432 171 0 0 chr2 6431172 6431254 -244256600 + (TGGA)n Simple_repeat Simple_repeat 3 84 0 767 154 15 12 chr2 6431276 6431545 -244256309 + (TGGA)n Simple_repeat Simple_repeat 1 270 0 758 148 11 33 chr2 6431563 6431746 -244256108 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 2399 101 0 0 chr2 6435063 6435370 -244252484 - AluSq SINE Alu -6 307 1 345 314 47 82 chr2 6437066 6437384 -244250470 - L2 LINE L2 -61 3211 2905 1701 209 64 9 chr2 6437484 6437920 -244249934 - MLT1C LTR MaLR -4 463 4 28 29 0 0 chr2 6439059 6439094 -244248760 + AT_rich Low_complexity Low_complexity 1 35 0 212 185 0 15 chr2 6439447 6439512 -244248342 + (TG)n Simple_repeat Simple_repeat 1 64 0 2322 92 45 0 chr2 6439517 6439852 -244248002 - THE1A LTR MaLR 0 355 6 194 295 253 24 chr2 6439961 6440127 -244247727 - MIR SINE MIR -19 243 40 263 306 34 54 chr2 6440558 6440705 -244247149 - MIR SINE MIR -76 186 43 215 333 66 68 chr2 6441097 6441463 -244246391 - L2 LINE L2 -13 3259 2895 204 296 19 0 chr2 6441465 6441519 -244246335 + L2 LINE L2 3259 3313 0 253 267 70 0 chr2 6441865 6441951 -244245903 + L3 LINE CR1 639 730 -847 2349 135 25 0 chr2 6442335 6442690 -244245164 + THE1B LTR MaLR 1 364 0 265 370 31 24 chr2 6443085 6443212 -244244642 - MIR SINE MIR -58 150 23 1667 108 0 0 chr2 6443807 6444019 -244243835 + AluSq SINE Alu 1 212 -101 291 312 88 35 chr2 6444522 6444692 -244243162 - MIR SINE MIR -71 191 13 216 0 0 0 chr2 6445039 6445063 -244242791 + (CA)n Simple_repeat Simple_repeat 2 25 0 445 227 62 0 chr2 6445375 6445472 -244242382 + MER5A DNA MER1_type 7 109 -80 891 260 149 6 chr2 6445510 6445845 -244242009 - MLT1E LTR MaLR 0 593 211 2348 135 75 96 chr2 6445913 6446504 -244241350 + LTR18B LTR ERVL 1 578 -36 213 121 0 0 chr2 6446528 6446561 -244241293 + (CATATA)n Simple_repeat Simple_repeat 6 38 0 278 237 322 0 chr2 6446568 6446686 -244241168 - MLT1E LTR MaLR -435 158 3 353 237 0 0 chr2 6446766 6446842 -244241012 + MLT1A1 LTR MaLR 1 76 -289 823 178 76 11 chr2 6446875 6447060 -244240794 + MLT1A1 LTR MaLR 169 365 0 461 336 132 40 chr2 6447101 6447841 -244240013 + L2 LINE L2 1812 2619 -695 190 232 58 58 chr2 6447862 6447931 -244239923 - L3 LINE CR1 -329 1248 1180 216 288 17 0 chr2 6449476 6449535 -244238319 + L2 LINE L2 3248 3307 -6 279 275 72 51 chr2 6449622 6449760 -244238094 + MIR3 SINE MIR 2 142 -66 878 259 92 28 chr2 6450593 6451123 -244236731 - L1MC5 LINE L1 -47 7914 7351 2390 85 3 0 chr2 6451266 6451559 -244236295 + AluY SINE Alu 1 294 -17 235 300 29 0 chr2 6452342 6452412 -244235442 + CT-rich Low_complexity Low_complexity 6 77 0 729 275 81 95 chr2 6454135 6454651 -244233203 - MLT1H LTR MaLR 0 549 41 210 71 0 0 chr2 6454698 6454726 -244233128 + (A)n Simple_repeat Simple_repeat 1 28 0 375 330 107 23 chr2 6455558 6456036 -244231818 - L2 LINE L2 -912 2402 1885 1778 187 51 48 chr2 6456054 6456449 -244231405 - MSTD LTR MaLR 0 396 1 418 325 0 0 chr2 6457264 6457381 -244230473 - MIR SINE MIR -5 257 141 232 121 0 0 chr2 6457626 6457659 -244230195 + MER31B LTR ERV1 1 33 -433 428 258 10 33 chr2 6457661 6457827 -244230027 + MER31A-int LTR ERV1 3082 3768 -2178 * 8356 178 50 44 chr2 6457806 6458280 -244229574 + MER31A-int LTR ERV1 3102 3572 -1364 2457 81 0 0 chr2 6458280 6458587 -244229267 - AluY SINE Alu -4 307 1 8356 178 50 44 chr2 6458587 6459917 -244227937 + MER31A-int LTR ERV1 3572 4916 -20 2549 153 26 52 chr2 6459917 6460415 -244227439 + MER31A LTR ERV1 1 485 0 356 294 137 0 chr2 6461167 6461313 -244226541 - MIR SINE MIR -78 184 19 217 336 0 28 chr2 6461663 6461806 -244226048 + CT-rich Low_complexity Low_complexity 4 142 0 1224 180 0 14 chr2 6462369 6462586 -244225268 - AluJb SINE Alu -13 299 86 1532 192 44 101 chr2 6462681 6463133 -244224721 + MLT1C LTR MaLR 1 424 -43 2359 96 0 3 chr2 6463133 6463436 -244224418 - AluSx SINE Alu -10 302 1 1532 192 44 101 chr2 6463436 6463478 -244224376 + MLT1C LTR MaLR 424 467 0 284 332 73 32 chr2 6463629 6463849 -244224005 + MIR SINE MIR 21 249 -13 1019 240 40 49 chr2 6463902 6464231 -244223623 + MLT2C1 LTR ERVL 6 331 -66 861 182 6 0 chr2 6464292 6464457 -244223397 + MLT1C-int LTR MaLR 22 187 -1184 * 962 221 103 0 chr2 6464454 6464658 -244223196 + MLT1C-int LTR MaLR 341 565 -806 301 301 170 20 chr2 6464808 6464961 -244222893 + L2 LINE L2 3097 3272 0 256 346 110 39 chr2 6465240 6465575 -244222279 + L2 LINE L2 2826 3184 -88 306 235 37 12 chr2 6465620 6465701 -244222153 + MER91B DNA MER1_type 57 139 -51 374 256 0 0 chr2 6465860 6465946 -244221908 - MIR SINE MIR -1 261 176 190 280 147 0 chr2 6466241 6466316 -244221538 + L2 LINE L2 3193 3278 -35 331 303 49 33 chr2 6466826 6466948 -244220906 + L2 LINE L2 3134 3257 -15 442 176 0 20 chr2 6466954 6467056 -244220798 + GA-rich Low_complexity Low_complexity 1 100 0 629 246 154 71 chr2 6467248 6467586 -244220268 - MLT1G3 LTR MaLR -42 488 123 900 216 98 98 chr2 6467590 6467949 -244219905 + MSTC LTR MaLR 1 412 -16 3158 81 0 3 chr2 6468394 6468779 -244219075 - L1PA7 LINE L1 -13 6141 5758 225 217 0 0 chr2 6469314 6469360 -244218494 - L1ME LINE L1 -500 5621 5576 1209 196 56 49 chr2 6469450 6469756 -244218098 - MLT2B3 LTR ERVL 0 554 247 192 296 182 11 chr2 6470485 6470573 -244217281 - MIR SINE MIR -72 136 34 254 333 43 17 chr2 6472005 6472122 -244215732 - MIR SINE MIR -112 150 31 1553 205 32 46 chr2 6472217 6472587 -244215267 + MLT1A1 LTR MaLR 1 365 0 379 309 9 0 chr2 6473335 6473445 -244214409 + L2 LINE L2 3200 3310 -3 223 197 0 42 chr2 6473690 6473761 -244214093 + G-rich Low_complexity Low_complexity 2 69 0 1630 148 65 0 chr2 6475289 6475552 -244212302 + AluSx SINE Alu 1 280 -32 385 326 85 35 chr2 6477302 6477679 -244210175 + L1ME LINE L1 5429 5824 -297 420 229 14 25 chr2 6478069 6478210 -244209644 - MLT1G1 LTR MaLR -400 195 3 361 167 0 0 chr2 6478211 6478271 -244209583 - MER112 DNA MER1_type -193 67 8 303 257 112 26 chr2 6478623 6478775 -244209079 - L1ME LINE L1 -380 5741 5577 184 351 43 32 chr2 6479516 6479610 -244208244 - L2 LINE L2 -230 3042 2948 240 86 0 0 chr2 6481623 6481658 -244206196 + (CCTG)n Simple_repeat Simple_repeat 2 36 0 2168 261 93 53 chr2 6481983 6483215 -244204639 + L1ME2 LINE L1 3281 4684 -1462 353 83 0 0 chr2 6483215 6483263 -244204591 - MADE1 DNA Mariner 0 80 33 2168 261 93 53 chr2 6483263 6483373 -244204481 + L1ME2 LINE L1 4684 4788 -1358 1143 236 24 39 chr2 6483381 6483712 -244204142 + MER58B DNA MER1_type 1 326 -15 1388 267 65 49 chr2 6483727 6484882 -244202972 + L1ME2 LINE L1 4791 5921 -243 1605 102 56 0 chr2 6484882 6485098 -244202756 + MER30 DNA MER1_type 3 230 0 1388 267 65 49 chr2 6485098 6485207 -244202647 + L1ME2 LINE L1 5921 6027 -137 1108 205 120 83 chr2 6485421 6485796 -244202058 + MLT1B LTR MaLR 2 390 0 902 196 30 0 chr2 6485838 6486006 -244201848 - MER58B DNA MER1_type -1 340 168 2788 244 54 15 chr2 6486368 6487287 -244200567 + L1PA12 LINE L1 2254 3065 -4509 12496 233 17 37 chr2 6487288 6490797 -244197057 - L1P LINE L1 -1082 5064 1627 271 263 25 0 chr2 6491293 6491373 -244196481 + MER103 DNA DNA 7 88 -78 288 170 0 0 chr2 6492029 6492082 -244195772 + (TG)n Simple_repeat Simple_repeat 1 53 0 346 311 115 52 chr2 6492257 6492527 -244195327 + L1M2a LINE L1 1041 1327 -5841 319 324 29 0 chr2 6493524 6493626 -244194228 - MIR SINE MIR -62 200 96 1998 138 17 3 chr2 6494742 6495040 -244192814 + AluJb SINE Alu 1 302 -10 28 0 0 0 chr2 6495091 6495119 -244192735 + AT_rich Low_complexity Low_complexity 1 28 0 660 151 95 0 chr2 6495347 6495473 -244192381 - L1MA9 LINE L1 0 6312 6175 208 148 0 37 chr2 6495479 6495533 -244192321 + (TTCC)n Simple_repeat Simple_repeat 3 54 0 226 213 0 0 chr2 6495542 6495589 -244192265 - L1MA9 LINE L1 -147 6165 6119 369 149 0 0 chr2 6496259 6496326 -244191528 + (TG)n Simple_repeat Simple_repeat 1 67 0 4541 132 7 11 chr2 6496543 6497257 -244190597 + MER50 LTR ERV1 1 711 -23 323 309 152 25 chr2 6497274 6497630 -244190224 - L2 LINE L2 -696 2618 2218 2188 119 0 0 chr2 6498019 6498314 -244189540 - AluSx SINE Alu -17 295 1 3940 157 31 37 chr2 6498747 6499485 -244188369 - MER50 LTR ERV1 0 734 1 256 294 56 40 chr2 6499494 6499620 -244188234 - L2 LINE L2 -512 2802 2675 880 144 20 0 chr2 6500917 6501063 -244186791 - L1MA5A LINE L1 0 6297 6149 261 293 0 37 chr2 6501406 6501488 -244186366 + MIR SINE MIR 38 116 -92 2210 118 43 38 chr2 6501988 6502361 -244185493 + THE1C LTR MaLR 1 375 0 454 315 55 22 chr2 6502963 6503328 -244184526 - L1M4 LINE L1 -2164 3982 3606 188 65 0 32 chr2 6503336 6503367 -244184487 + (TCC)n Simple_repeat Simple_repeat 3 32 0 349 280 73 7 chr2 6503698 6503848 -244184006 - L1M4 LINE L1 -2922 3224 3065 219 311 104 55 chr2 6504381 6504476 -244183378 + MIR SINE MIR 57 146 -116 2185 131 0 0 chr2 6504476 6504782 -244183072 - AluSq SINE Alu -7 306 1 219 311 104 55 chr2 6504782 6504869 -244182985 + MIR SINE MIR 146 248 -14 238 247 0 71 chr2 6505088 6505173 -244182681 + T-rich Low_complexity Low_complexity 2 80 0 315 113 0 0 chr2 6505589 6505642 -244182212 + (TG)n Simple_repeat Simple_repeat 2 54 0 2156 126 70 17 chr2 6507083 6507439 -244180415 + THE1C LTR MaLR 1 375 0 1826 153 0 0 chr2 6507821 6508115 -244179739 + AluSx SINE Alu 22 315 0 212 318 115 27 chr2 6508165 6508313 -244179541 - MIR3 SINE MIR -45 163 3 350 333 60 18 chr2 6509678 6509846 -244178008 + MER5B DNA MER1_type 1 175 -3 332 250 20 60 chr2 6511214 6511314 -244176540 + MIR SINE MIR 50 145 -63 252 122 0 0 chr2 6511972 6512013 -244175841 + (TG)n Simple_repeat Simple_repeat 2 42 0 198 333 42 14 chr2 6513023 6513095 -244174759 + L2 LINE L2 3016 3089 -183 2278 84 0 37 chr2 6513120 6513442 -244174412 - AluSg SINE Alu 0 310 1 822 144 106 48 chr2 6513537 6513612 -244174242 + THE1C LTR MaLR 1 70 -305 2661 112 14 16 chr2 6513612 6513977 -244173877 + THE1B LTR MaLR 1 364 0 822 144 106 48 chr2 6513977 6514109 -244173745 + THE1C LTR MaLR 70 220 -155 366 23 0 0 chr2 6514583 6514626 -244173228 + (CA)n Simple_repeat Simple_repeat 1 43 0 1301 186 13 13 chr2 6514642 6514878 -244172976 + MER46A DNA MER2_type 1 236 0 495 239 117 35 chr2 6514988 6515218 -244172636 - HAL1 LINE L1 -10 2497 2249 760 318 64 41 chr2 6515305 6516013 -244171841 - HAL1 LINE L1 -533 1974 1251 361 233 0 33 chr2 6516034 6516124 -244171730 - HAL1 LINE L1 -1355 1152 1066 1321 247 98 43 chr2 6516184 6516654 -244171200 - MLT1D LTR MaLR -9 496 1 251 309 34 7 chr2 6516678 6516827 -244171027 - HAL1 LINE L1 -1189 1318 1166 1168 239 97 50 chr2 6516950 6517489 -244170365 - HAL1 LINE L1 -1313 1194 631 387 281 87 20 chr2 6518790 6518986 -244168868 - MIR SINE MIR -13 249 41 21 0 0 0 chr2 6519241 6519262 -244168592 + AT_rich Low_complexity Low_complexity 1 21 0 35 0 0 0 chr2 6520230 6520265 -244167589 + AT_rich Low_complexity Low_complexity 1 35 0 210 106 47 35 chr2 6520272 6520357 -244167497 + (TATAA)n Simple_repeat Simple_repeat 5 90 0 23 0 0 0 chr2 6520360 6520383 -244167471 + AT_rich Low_complexity Low_complexity 1 23 0 227 346 79 0 chr2 6521971 6522072 -244165782 - MIR SINE MIR -84 124 16 668 64 0 32 chr2 6522631 6522725 -244165129 - L1PA8 LINE L1 0 6172 6082 317 128 0 0 chr2 6522725 6522772 -244165082 - L1PA8 LINE L1 -44 6128 6082 345 85 0 0 chr2 6522772 6522819 -244165035 - L1PA8A LINE L1 -42 6089 6043 * 380 56 0 153 chr2 6522794 6522866 -244164988 - L1PA8 LINE L1 -30 6142 6082 353 64 0 0 chr2 6522866 6522913 -244164941 - L1PA8 LINE L1 -44 6128 6082 354 104 0 0 chr2 6522913 6522961 -244164893 - L1PA8 LINE L1 -44 6128 6081 377 43 0 0 chr2 6522961 6523007 -244164847 - L1PA8 LINE L1 -45 6127 6082 * 380 56 0 153 chr2 6522982 6523054 -244164800 - L1PA8 LINE L1 -30 6142 6082 329 110 0 151 chr2 6523029 6523102 -244164752 - L1PA8 LINE L1 -30 6142 6081 * 377 43 0 0 chr2 6523102 6523148 -244164706 - L1PA8 LINE L1 -45 6127 6082 367 69 0 153 chr2 6523123 6523195 -244164659 - L1PA8A LINE L1 -28 6103 6043 * 752 74 0 90 chr2 6523170 6523292 -244164562 - L1PA8 LINE L1 -30 6142 6032 382 339 32 27 chr2 6523514 6523700 -244164154 + MIR SINE MIR 50 236 -26 267 311 48 10 chr2 6524019 6524122 -244163732 - MIR SINE MIR -150 112 6 993 304 127 32 chr2 6524227 6524907 -244162947 + L2 LINE L2 2112 2855 -459 310 309 77 101 chr2 6525293 6525810 -244162044 + L2 LINE L2 2809 3313 0 298 217 158 33 chr2 6526940 6527060 -244160794 + L2 LINE L2 2235 2369 -945 366 309 144 45 chr2 6527745 6527946 -244159908 + L1MEd LINE L1 411 631 -5488 410 282 0 10 chr2 6528238 6528341 -244159513 - MER5A DNA MER1_type -79 110 9 563 247 20 13 chr2 6528375 6528525 -244159329 - MLT1E2 LTR MaLR -3 623 473 2605 138 4 5 chr2 6528619 6529068 -244158786 - L1P LINE L1 -1544 4602 4158 1880 253 109 20 chr2 6529077 6529790 -244158064 - L1ME1 LINE L1 -17 6149 5373 296 209 43 87 chr2 6529799 6529822 -244158032 - L1ME1 LINE L1 -846 5300 5278 2290 77 0 3 chr2 6529822 6530108 -244157746 + L1PA6 LINE L1 5870 6154 0 296 209 43 87 chr2 6530108 6530199 -244157655 - L1ME1 LINE L1 -868 5278 5191 * 8082 158 49 33 chr2 6530193 6530673 -244157181 + L1MCa LINE L1 69 540 -5886 1562 175 44 34 chr2 6530673 6530970 -244156884 - AluJo SINE Alu -12 300 1 8082 158 49 33 chr2 6530970 6531900 -244155954 + L1MCa LINE L1 540 1509 -4917 2494 146 41 7 chr2 6531900 6532311 -244155543 + MSTA LTR MaLR 1 425 -3 8082 158 49 33 chr2 6532311 6532451 -244155403 + L1MCa LINE L1 1509 1645 -4781 1213 268 51 28 chr2 6532456 6532949 -244154905 - L1ME1 LINE L1 -2362 3784 3281 400 167 14 0 chr2 6532956 6533028 -244154826 - 7SK RNA RNA 0 193 121 604 152 0 9 chr2 6533064 6533176 -244154678 - 7SK RNA RNA -68 125 15 6213 64 7 7 chr2 6533177 6534296 -244153558 + L1PA7 LINE L1 4918 6039 -115 1006 263 92 46 chr2 6534455 6534941 -244152913 - MLT1E LTR MaLR 0 593 103 569 194 0 0 chr2 6534927 6535020 -244152834 - MLT1E LTR MaLR -449 144 52 * 239 139 0 0 chr2 6535430 6535466 -244152388 + L1P LINE L1 5224 5259 -887 246 357 7 50 chr2 6536927 6537067 -244150787 - MIR SINE MIR -51 211 78 258 282 24 73 chr2 6537218 6537342 -244150512 - L2 LINE L2 -218 3054 2937 194 286 62 71 chr2 6537719 6537831 -244150023 - L2 LINE L2 -11 3302 3192 2446 74 0 0 chr2 6538561 6538857 -244148997 + AluSg SINE Alu 1 296 -14 2015 141 0 0 chr2 6539172 6539470 -244148384 - AluSx SINE Alu -14 298 1 2180 126 7 0 chr2 6539847 6540149 -244147705 - AluSq SINE Alu -9 304 1 1206 95 0 0 chr2 6540162 6540320 -244147534 - AluY SINE Alu -8 303 146 321 293 34 27 chr2 6540959 6541106 -244146748 - MLT1I LTR MaLR -2 407 260 911 188 73 5 chr2 6542669 6542861 -244144993 + MLT2C1 LTR ERVL 1 205 -192 798 226 68 30 chr2 6542842 6543076 -244144778 + MLT1C LTR MaLR 225 467 0 * 6047 264 77 23 chr2 6543630 6546128 -244141726 + L1MEc LINE L1 46 2644 -3571 2363 189 38 2 chr2 6547235 6547652 -244140202 - MSTB1 LTR MaLR 0 432 1 2530 149 28 28 chr2 6548215 6548643 -244139211 + MSTA LTR MaLR 1 428 0 22 0 0 0 chr2 6550146 6550168 -244137686 + AT_rich Low_complexity Low_complexity 1 22 0 1265 221 164 45 chr2 6550183 6550706 -244137148 - L1MC2 LINE L1 0 7970 6186 281 218 30 69 chr2 6550706 6550807 -244137047 - MLT1I LTR MaLR -436 131 35 724 143 45 112 chr2 6550825 6551048 -244136806 - L1MC3 LINE L1 -706 7079 6872 204 40 0 0 chr2 6551058 6551083 -244136771 + (TATATG)n Simple_repeat Simple_repeat 4 28 0 246 32 0 0 chr2 6551089 6551120 -244136734 + (CA)n Simple_repeat Simple_repeat 2 32 0 1365 217 75 63 chr2 6551120 6551620 -244136234 - L1MC3 LINE L1 -1230 6555 6050 5677 176 118 101 chr2 6551657 6552247 -244135607 - L1MCa LINE L1 -4184 2242 1663 186 43 0 0 chr2 6552247 6552270 -244135584 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 5677 176 118 101 chr2 6552270 6553633 -244134221 - L1MCa LINE L1 -4763 1663 256 314 292 34 0 chr2 6553730 6553819 -244134035 - L1MC4 LINE L1 -1339 6703 6612 418 168 15 23 chr2 6553820 6553951 -244133903 + (TA)n Simple_repeat Simple_repeat 1 130 0 1649 182 3 20 chr2 6553956 6554252 -244133602 - AluJb SINE Alu -21 291 1 252 395 8 8 chr2 6555271 6555405 -244132449 - MIR3 SINE MIR -38 170 37 385 314 108 10 chr2 6556262 6556456 -244131398 - MIR SINE MIR 0 262 50 300 198 42 18 chr2 6556848 6557015 -244130839 + (TAGA)n Simple_repeat Simple_repeat 3 173 0 466 140 20 0 chr2 6557177 6557277 -244130577 + (TAGA)n Simple_repeat Simple_repeat 3 104 0 1890 153 10 0 chr2 6558017 6558325 -244129529 - AluSx SINE Alu -1 311 1 195 114 0 0 chr2 6558770 6558805 -244129049 + (CTTA)n Simple_repeat Simple_repeat 2 36 0 229 250 0 0 chr2 6559155 6559203 -244128651 - MIR SINE MIR -129 79 32 23 0 0 0 chr2 6559636 6559659 -244128195 + AT_rich Low_complexity Low_complexity 1 23 0 494 16 16 0 chr2 6562262 6562325 -244125529 + (TC)n Simple_repeat Simple_repeat 2 65 0 558 303 90 10 chr2 6562675 6562975 -244124879 + L2 LINE L2 1984 2307 -1007 198 244 22 0 chr2 6563262 6563307 -244124547 + MIR3 SINE MIR 135 180 -28 1107 233 51 10 chr2 6563436 6563732 -244124122 + MLT1C LTR MaLR 152 459 -8 290 321 18 28 chr2 6563741 6563850 -244124004 + L2 LINE L2 2344 2451 -863 506 340 36 57 chr2 6563954 6564289 -244123565 + L2 LINE L2 2986 3313 0 1371 101 48 18 chr2 6564936 6565163 -244122691 - L1MA8 LINE L1 -6 6285 6052 239 342 82 6 chr2 6565401 6565559 -244122295 - MIR SINE MIR -55 207 38 1720 185 44 15 chr2 6566082 6566366 -244121488 + MLT2B2 LTR ERVL 1 275 -279 207 0 0 0 chr2 6566366 6566389 -244121465 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1720 185 44 15 chr2 6566389 6566529 -244121325 + MLT2B2 LTR ERVL 275 410 -144 986 54 42 0 chr2 6566529 6566696 -244121158 + (TCTA)n Simple_repeat Simple_repeat 4 177 0 1720 185 44 15 chr2 6566696 6566714 -244121140 + MLT2B2 LTR ERVL 410 552 -2 1119 40 0 0 chr2 6567582 6567707 -244120147 + AluY SINE Alu 1 125 -186 9985 26 2 1 chr2 6567707 6569644 -244118210 + L1PA3 LINE L1 4230 6169 0 2143 123 0 19 chr2 6569659 6569968 -244117886 + AluSx SINE Alu 3 305 -7 319 186 0 17 chr2 6569978 6570037 -244117817 - LTR67 LTR ERVL -86 471 414 435 153 153 0 chr2 6570087 6570172 -244117682 - MER53 DNA DNA -91 98 1 252 246 15 0 chr2 6570385 6570450 -244117404 + L1ME LINE L1 5367 5432 -732 386 221 271 0 chr2 6570477 6570599 -244117255 + MIR SINE MIR 12 166 -96 2196 102 3 0 chr2 6570649 6570953 -244116901 - AluSp SINE Alu -3 310 6 377 260 21 10 chr2 6571028 6571124 -244116730 + L2 LINE L2 39 135 -3179 2730 167 28 28 chr2 6571151 6571695 -244116159 + L1MC3 LINE L1 7241 7784 -1 23 0 0 0 chr2 6571695 6571718 -244116136 + AT_rich Low_complexity Low_complexity 1 23 0 1595 62 0 0 chr2 6571718 6571910 -244115944 + AluY SINE Alu 118 309 -2 315 0 0 0 chr2 6571916 6571951 -244115903 + (TAA)n Simple_repeat Simple_repeat 2 36 0 349 267 139 0 chr2 6572842 6572943 -244114911 + MER5B DNA MER1_type 4 118 -60 948 182 61 22 chr2 6573404 6573635 -244114219 - LTR32 LTR ERVL 0 471 232 279 203 78 0 chr2 6573617 6573681 -244114173 - LTR32 LTR ERVL -400 71 3 * 334 257 83 0 chr2 6573687 6573796 -244114058 - L2 LINE L2 -79 3234 3117 794 192 46 0 chr2 6574244 6574395 -244113459 + MER97a DNA MER1_type? 19 176 -718 1345 101 0 0 chr2 6575149 6575317 -244112537 + AluSc SINE Alu 134 301 -8 912 336 126 19 chr2 6575455 6576140 -244111714 - ERVL LTR ERVL -284 5480 4723 206 328 48 40 chr2 6576709 6576834 -244111020 - MIR SINE MIR -59 203 78 279 243 57 0 chr2 6576958 6577028 -244110826 + MER91B DNA MER1_type 6 79 -111 301 179 18 0 chr2 6578104 6578160 -244109694 + MER91B DNA MER1_type 6 62 -128 204 313 51 21 chr2 6578854 6578990 -244108864 + MIR SINE MIR 3 135 -73 21 0 0 0 chr2 6579009 6579030 -244108824 + AT_rich Low_complexity Low_complexity 1 21 0 2258 104 44 41 chr2 6579473 6579839 -244108015 + THE1C LTR MaLR 5 371 -4 581 277 116 31 chr2 6580059 6580351 -244107503 + LTR33 LTR ERVL 205 521 0 1066 81 0 0 chr2 6580444 6580580 -244107274 + AluY SINE Alu 173 308 -3 351 239 0 0 chr2 6580797 6580927 -244106927 + (TG)n Simple_repeat Simple_repeat 2 131 0 579 239 3 0 chr2 6580949 6581306 -244106548 + (TG)n Simple_repeat Simple_repeat 1 358 0 252 305 162 0 chr2 6581956 6582110 -244105744 - MIR3 SINE MIR -9 199 21 1188 196 46 39 chr2 6584167 6584447 -244103407 + AluJo SINE Alu 1 282 -30 3242 190 137 112 chr2 6584517 6585036 -244102818 + L1MC3 LINE L1 6566 7070 -715 263 294 20 10 chr2 6585036 6585138 -244102716 + MLT1F1 LTR MaLR 29 131 -436 3242 190 137 112 chr2 6585138 6585696 -244102158 + L1MC3 LINE L1 7070 7774 -11 267 365 19 0 chr2 6585701 6585808 -244102046 - L2 LINE L2 -15 3298 3190 417 330 57 24 chr2 6586312 6586524 -244101330 + MIR SINE MIR 14 232 -30 477 0 0 0 chr2 6586735 6586788 -244101066 + (GGAA)n Simple_repeat Simple_repeat 4 56 0 185 0 40 0 chr2 6586787 6586812 -244101042 + (TAA)n Simple_repeat Simple_repeat 2 27 0 * 1301 268 49 12 chr2 6587134 6587544 -244100310 + LTR16C LTR ERVL 67 491 0 3366 187 101 41 chr2 6587763 6588612 -244099242 - L1MA4 LINE L1 -1 6299 5400 1084 103 5 19 chr2 6589890 6590380 -244097474 + (TCCA)n Simple_repeat Simple_repeat 1 666 0 289 316 129 84 chr2 6591333 6591558 -244096296 - L2 LINE L2 -8 3264 3030 261 353 181 23 chr2 6591706 6591839 -244096015 - L2 LINE L2 -8 3264 3111 388 398 25 0 chr2 6592311 6592472 -244095382 - L2 LINE L2 -1 3271 3107 637 91 20 0 chr2 6594028 6594127 -244093727 - L1MA10 LINE L1 0 6334 6234 1695 161 0 28 chr2 6596335 6596649 -244091205 - AluJb SINE Alu 0 307 2 186 292 31 0 chr2 6597110 6597175 -244090679 - MIR SINE MIR -70 192 126 1721 184 5 89 chr2 6599590 6599779 -244088075 + MER57A LTR ERV1 1 134 -269 2071 143 23 52 chr2 6599779 6600164 -244087690 + THE1C LTR MaLR 1 374 -1 1721 184 5 89 chr2 6600164 6600414 -244087440 + MER57A LTR ERV1 134 403 0 242 240 125 87 chr2 6601260 6601582 -244086272 + L1ME4a LINE L1 5584 5927 -194 207 0 0 0 chr2 6601582 6601605 -244086249 + (TG)n Simple_repeat Simple_repeat 2 24 0 242 240 125 87 chr2 6601605 6601698 -244086156 + L1ME4a LINE L1 5927 6015 -106 22 35 0 0 chr2 6601755 6601784 -244086070 + AT_rich Low_complexity Low_complexity 1 29 0 393 276 91 73 chr2 6601866 6602154 -244085700 - L1MEd LINE L1 -4867 1252 971 1596 180 16 32 chr2 6602154 6602470 -244085384 - AluJo SINE Alu -1 311 1 393 276 91 73 chr2 6602470 6602743 -244085111 - L1MEd LINE L1 -5148 971 681 1807 236 31 8 chr2 6603391 6603776 -244084078 + MSTD LTR MaLR 1 394 -2 453 293 47 22 chr2 6603818 6604050 -244083804 + L1MC/D LINE L1 5584 5821 -1987 767 301 0 0 chr2 6604051 6604254 -244083600 + MER63A DNA MER1_type 1 203 -7 1625 147 0 96 chr2 6604384 6604698 -244083156 + AluJo SINE Alu 3 286 -26 24 32 0 0 chr2 6604966 6604997 -244082857 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr2 6605272 6605300 -244082554 + AT_rich Low_complexity Low_complexity 1 28 0 1613 202 71 49 chr2 6605306 6605672 -244082182 + MLT1A2 LTR MaLR 1 374 0 628 49 24 0 chr2 6607726 6607808 -244080046 - L1PA10 LINE L1 -8 6160 6077 242 35 0 0 chr2 6607809 6607838 -244080016 + L1PA10 LINE L1 6020 6048 -120 5657 273 47 66 chr2 6608146 6609229 -244078625 - L2 LINE L2 -405 2909 1806 315 0 0 0 chr2 6609229 6609264 -244078590 + (TTA)n Simple_repeat Simple_repeat 2 36 0 1509 173 24 12 chr2 6609267 6609516 -244078338 - AluJb SINE Alu -30 282 31 564 195 0 0 chr2 6609516 6609598 -244078256 - AluJ/FLAM SINE Alu -228 84 3 5657 273 47 66 chr2 6609598 6609673 -244078181 - L2 LINE L2 -1509 1805 1730 1952 126 31 0 chr2 6609673 6609959 -244077895 + AluSx SINE Alu 17 311 -1 5657 273 47 66 chr2 6609959 6611057 -244076797 - L2 LINE L2 -1584 1730 612 223 385 62 26 chr2 6611220 6611412 -244076442 + L2 LINE L2 2652 2850 -464 326 303 92 17 chr2 6612169 6612288 -244075566 - MIR SINE MIR -60 148 21 180 0 0 0 chr2 6613273 6613293 -244074561 + (A)n Simple_repeat Simple_repeat 1 20 0 902 107 61 0 chr2 6613904 6614035 -244073819 + MER85 DNA T2_type 1 139 0 272 311 145 25 chr2 6615208 6615589 -244072265 + MLT1J LTR MaLR 35 509 -2 2133 171 97 13 chr2 6615981 6616374 -244071480 + MSTB LTR MaLR 1 426 0 1818 144 3 56 chr2 6616540 6616860 -244070994 + AluJb SINE Alu 1 303 -9 249 108 0 0 chr2 6616860 6616897 -244070957 + (TG)n Simple_repeat Simple_repeat 1 37 0 194 385 15 22 chr2 6617033 6617168 -244070686 - L2 LINE L2 -534 2780 2647 181 216 54 0 chr2 6618296 6618333 -244069521 + L2 LINE L2 3182 3220 -93 1820 214 23 3 chr2 6619370 6619721 -244068133 - MLT1A1 LTR MaLR -1 364 7 1634 174 59 3 chr2 6620474 6620762 -244067092 - AluJb SINE Alu -8 304 1 222 190 17 17 chr2 6620803 6620861 -244066993 + A-rich Low_complexity Low_complexity 5 62 0 533 277 34 0 chr2 6620872 6621020 -244066834 - MIR SINE MIR -108 154 2 240 143 0 0 chr2 6621755 6621797 -244066057 + (TA)n Simple_repeat Simple_repeat 1 42 0 56 16 0 0 chr2 6621844 6621907 -244065947 + AT_rich Low_complexity Low_complexity 1 63 0 1436 182 0 0 chr2 6622008 6622255 -244065599 - MER57A LTR ERV1 0 403 157 1872 149 10 7 chr2 6624651 6624939 -244062915 - AluSx SINE Alu -23 289 1 187 241 74 19 chr2 6625063 6625117 -244062737 + L2 LINE L2 3195 3251 -21 191 330 80 18 chr2 6625140 6625252 -244062602 - L2 LINE L2 -6 3307 3189 2153 135 0 0 chr2 6625537 6625834 -244062020 - AluSx SINE Alu -15 297 1 360 316 0 0 chr2 6625869 6625964 -244061890 + L2 LINE L2 3174 3268 -4 1975 193 51 22 chr2 6626028 6626442 -244061412 + MSTB LTR MaLR 1 426 0 308 159 0 16 chr2 6627232 6627295 -244060559 + (TG)n Simple_repeat Simple_repeat 2 63 0 268 278 144 0 chr2 6629237 6629334 -244058520 - MIR SINE MIR -75 187 77 1651 154 7 54 chr2 6629508 6629806 -244058048 + AluJo SINE Alu 5 288 -24 237 65 0 0 chr2 6629967 6629998 -244057856 + (TG)n Simple_repeat Simple_repeat 2 32 0 189 0 0 0 chr2 6630019 6630040 -244057814 + (CA)n Simple_repeat Simple_repeat 2 22 0 * 576 29 0 0 chr2 6630039 6630109 -244057745 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 192 40 0 0 chr2 6630132 6630157 -244057697 + (GA)n Simple_repeat Simple_repeat 2 26 0 22 35 0 0 chr2 6630201 6630230 -244057624 + AT_rich Low_complexity Low_complexity 1 29 0 234 282 26 13 chr2 6630903 6630981 -244056873 + MIR3 SINE MIR 100 178 -30 22 0 0 0 chr2 6631267 6631289 -244056565 + AT_rich Low_complexity Low_complexity 1 22 0 2281 96 0 7 chr2 6632231 6632532 -244055322 + AluY SINE Alu 1 299 -12 21 0 0 0 chr2 6634680 6634701 -244053153 + AT_rich Low_complexity Low_complexity 1 21 0 2270 118 0 0 chr2 6634858 6635162 -244052692 + AluSx SINE Alu 2 305 -7 207 125 0 0 chr2 6635924 6635964 -244051890 + (T)n Simple_repeat Simple_repeat 1 40 0 22 43 0 21 chr2 6635973 6636003 -244051851 + AT_rich Low_complexity Low_complexity 1 31 -15 2945 102 67 9 chr2 6636003 6636452 -244051402 - L1PB1 LINE L1 -3 6148 5674 22 43 0 21 chr2 6636452 6636468 -244051386 + AT_rich Low_complexity Low_complexity 31 46 0 2754 30 0 0 chr2 6636468 6636771 -244051083 - L1PA5 LINE L1 -11 6143 5841 235 293 57 19 chr2 6637315 6637421 -244050433 - L1MDa LINE L1 -4643 1897 1788 30 0 0 0 chr2 6637626 6637656 -244050198 + AT_rich Low_complexity Low_complexity 1 30 0 2901 194 55 5 chr2 6638464 6639042 -244048812 + MER82 DNA MER2_type 47 653 0 245 336 50 29 chr2 6639066 6639206 -244048648 + MIR3 SINE MIR 16 158 -50 7274 160 11 27 chr2 6639310 6639992 -244047862 - HSMAR2 DNA Mariner -2 1300 648 2113 128 3 0 chr2 6639992 6640290 -244047564 + AluSc SINE Alu 10 308 -1 7274 160 11 27 chr2 6640290 6640919 -244046935 - HSMAR2 DNA Mariner -654 648 10 312 227 40 13 chr2 6641409 6641484 -244046370 + MER5A DNA MER1_type 30 106 -83 402 312 26 21 chr2 6642101 6642290 -244045564 - MIR SINE MIR 0 262 73 442 286 23 15 chr2 6643344 6643477 -244044377 + MIR3 SINE MIR 75 208 0 317 304 62 0 chr2 6644842 6644954 -244042900 + MER34 LTR ERV1 1 119 -423 * 1477 265 78 13 chr2 6644943 6645407 -244042447 + LTR48B LTR ERV1 151 644 0 2289 175 144 45 chr2 6645810 6646388 -244041466 + LTR24C LTR ERV1 1 635 0 204 213 43 0 chr2 6647221 6647268 -244040586 + (CATATA)n Simple_repeat Simple_repeat 4 52 0 241 251 5 0 chr2 6647844 6647924 -244039930 + MIR SINE MIR 97 178 -30 1678 190 14 3 chr2 6648272 6648562 -244039292 - AluJo SINE Alu -18 294 2 218 312 80 14 chr2 6648970 6649108 -244038746 + MIR SINE MIR 70 216 -46 215 288 68 0 chr2 6649212 6649285 -244038569 - MIR SINE MIR -95 167 90 13096 134 28 122 chr2 6649583 6652345 -244035509 + L1PA15-16 LINE L1 2 2502 -4347 1061 150 6 12 chr2 6652391 6652564 -244035290 + L1PA16 LINE L1 5993 6164 -2 1695 229 128 18 chr2 6652950 6653178 -244034676 - MLT1D LTR MaLR -1 504 303 2279 104 13 0 chr2 6653178 6653477 -244034377 - AluSx SINE Alu -9 303 1 1695 229 128 18 chr2 6653477 6653702 -244034152 - MLT1D LTR MaLR -202 303 1 205 153 17 34 chr2 6654407 6654466 -244033388 + CT-rich Low_complexity Low_complexity 2 59 0 202 352 44 0 chr2 6654533 6654624 -244033230 - L2 LINE L2 -1001 2313 2219 237 139 0 0 chr2 6654673 6654716 -244033138 + (CA)n Simple_repeat Simple_repeat 2 44 0 22 0 0 0 chr2 6655603 6655625 -244032229 + AT_rich Low_complexity Low_complexity 1 22 0 210 362 38 0 chr2 6656887 6656992 -244030862 + MIR SINE MIR 33 141 -67 827 269 0 0 chr2 6657474 6657667 -244030187 - MER58A DNA MER1_type -5 219 27 196 241 68 33 chr2 6659565 6659656 -244028198 + MIR SINE MIR 28 126 -82 1623 99 86 65 chr2 6659656 6659948 -244027906 - AluSq SINE Alu -6 307 10 196 241 68 33 chr2 6659948 6659966 -244027888 + MIR SINE MIR 126 142 -66 266 361 38 19 chr2 6660364 6660522 -244027332 + MIR SINE MIR 54 214 -48 267 250 0 0 chr2 6661040 6661140 -244026714 + (TG)n Simple_repeat Simple_repeat 1 100 0 439 238 129 41 chr2 6661902 6662119 -244025735 - MIR SINE MIR -11 251 22 214 266 78 104 chr2 6662750 6662904 -244024950 - MER5B DNA MER1_type -35 154 5 1838 178 0 3 chr2 6663010 6663303 -244024551 + AluJb SINE Alu 3 294 -18 369 215 65 9 chr2 6663480 6663599 -244024255 - MLT1I LTR MaLR 0 450 281 236 328 25 17 chr2 6663686 6663805 -244024049 - MLT1I LTR MaLR -289 260 141 627 157 6 93 chr2 6664274 6664401 -244023453 + L1MC2 LINE L1 6188 6298 -46 2325 115 0 0 chr2 6664401 6664705 -244023149 - AluSx SINE Alu -8 304 1 627 157 6 93 chr2 6664705 6664749 -244023105 + L1MC2 LINE L1 6298 6344 0 * 1893 248 148 58 chr2 6664745 6665651 -244022203 + L1MC4 LINE L1 6914 7918 -124 333 0 0 0 chr2 6665651 6665688 -244022166 + (CA)n Simple_repeat Simple_repeat 2 38 0 1893 248 148 58 chr2 6665688 6665771 -244022083 + L1MC4 LINE L1 7918 7992 -50 2108 130 0 0 chr2 6666806 6667106 -244020748 - AluSc SINE Alu -9 300 1 1882 233 137 37 chr2 6668489 6669141 -244018713 - L1ME1 LINE L1 -18 6148 5432 1736 188 3 10 chr2 6669336 6669640 -244018214 + AluJo SINE Alu 1 302 -10 2144 190 128 0 chr2 6669867 6670289 -244017565 + MLT2B2 LTR ERVL 1 476 -39 576 36 58 29 chr2 6670289 6670426 -244017428 + (TCTA)n Simple_repeat Simple_repeat 2 142 0 356 100 50 20 chr2 6670438 6670538 -244017316 + (TCTA)n Simple_repeat Simple_repeat 3 105 0 22 0 0 0 chr2 6670624 6670646 -244017208 + AT_rich Low_complexity Low_complexity 1 22 0 2286 123 0 0 chr2 6671078 6671386 -244016468 - AluSg SINE Alu -2 308 1 24 32 0 0 chr2 6671947 6671978 -244015876 + AT_rich Low_complexity Low_complexity 1 31 0 287 113 19 0 chr2 6672301 6672354 -244015500 + CT-rich Low_complexity Low_complexity 1 54 0 390 57 0 0 chr2 6672620 6672673 -244015181 + (TG)n Simple_repeat Simple_repeat 2 54 0 613 287 22 67 chr2 6673562 6673830 -244014024 + MLT1I LTR MaLR 95 350 -59 851 239 29 19 chr2 6674119 6674328 -244013526 + MER58A DNA MER1_type 7 217 -7 248 344 11 11 chr2 6675681 6675771 -244012083 - L2 LINE L2 -78 3194 3105 2212 111 0 3 chr2 6676860 6677157 -244010697 + AluSg SINE Alu 11 306 -4 271 196 71 131 chr2 6677205 6677319 -244010535 - MIR3 SINE MIR -21 187 85 667 247 17 11 chr2 6677319 6677493 -244010361 - MER5B DNA MER1_type -3 175 1 271 196 71 131 chr2 6677493 6677546 -244010308 - MIR3 SINE MIR -123 85 30 1314 170 50 57 chr2 6678416 6678562 -244009292 + AluJo SINE Alu 1 146 -166 2473 57 3 3 chr2 6678562 6678860 -244008994 + AluY SINE Alu 1 298 -13 1314 170 50 57 chr2 6678860 6678996 -244008858 + AluJo SINE Alu 146 281 -31 1729 138 0 8 chr2 6679395 6679682 -244008172 + AluSg SINE Alu 29 313 0 1614 169 59 72 chr2 6679888 6680278 -244007576 - MLT1B LTR MaLR 0 390 6 2138 118 3 0 chr2 6680702 6680991 -244006863 + AluSx SINE Alu 5 294 -18 2117 111 0 3 chr2 6681825 6682123 -244005731 + AluSg SINE Alu 1 297 -13 397 193 67 8 chr2 6682161 6682280 -244005574 + L1MCa LINE L1 1293 1418 -5008 204 143 0 24 chr2 6682280 6682322 -244005532 + (CAAA)n Simple_repeat Simple_repeat 1 41 0 26 64 0 0 chr2 6682472 6682519 -244005335 + AT_rich Low_complexity Low_complexity 1 47 0 24 53 0 0 chr2 6682544 6682582 -244005272 + AT_rich Low_complexity Low_complexity 1 38 0 581 194 8 23 chr2 6682810 6682939 -244004915 + MIR SINE MIR 105 231 -31 27 29 0 0 chr2 6684711 6684745 -244003109 + AT_rich Low_complexity Low_complexity 1 34 0 418 337 76 52 chr2 6686164 6686452 -244001402 - L2 LINE L2 0 3272 2978 311 273 27 9 chr2 6686525 6686635 -244001219 - MIR SINE MIR 0 262 151 335 359 132 23 chr2 6686636 6686856 -244000998 + L3 LINE CR1 1328 1571 -6 2271 153 42 30 chr2 6687327 6687875 -243999979 - MLT2A2 LTR ERVL 0 554 1 15874 90 13 3 chr2 6687875 6689962 -243997892 - HERVL-A2 LTR ERVL 0 5654 3548 406 211 65 103 chr2 6690717 6690902 -243996952 + MER104 DNA MER2_type 1 178 -2 281 365 76 54 chr2 6692532 6692902 -243994952 + L2 LINE L2 2895 3272 0 1987 250 63 33 chr2 6693804 6694976 -243992878 + L1ME1 LINE L1 4511 5724 -440 387 215 132 42 chr2 6694983 6695181 -243992673 + L1ME1 LINE L1 5965 6334 0 225 340 64 14 chr2 6695300 6695441 -243992413 + L2 LINE L2 3162 3309 -4 4184 189 22 28 chr2 6696736 6698071 -243989783 - L1MB3 LINE L1 -41 6142 4819 2202 212 40 16 chr2 6698274 6698718 -243989136 + MLT2B2 LTR ERVL 1 455 -60 951 57 19 19 chr2 6698718 6698877 -243988977 + (TCTA)n Simple_repeat Simple_repeat 2 160 0 325 335 40 50 chr2 6699791 6699991 -243987863 + MIR SINE MIR 47 244 -18 192 158 0 0 chr2 6700558 6700596 -243987258 + T-rich Low_complexity Low_complexity 1 38 0 2264 194 27 57 chr2 6703980 6704565 -243983289 - L1MC1 LINE L1 -75 6258 5739 1279 53 0 0 chr2 6704565 6704715 -243983139 - L1PA3 LINE L1 -3 6152 6003 2264 194 27 57 chr2 6704715 6705023 -243982831 - L1MC1 LINE L1 -594 5739 5423 207 283 0 0 chr2 6705471 6705517 -243982337 + (TTG)n Simple_repeat Simple_repeat 2 47 0 243 328 59 8 chr2 6705554 6705673 -243982181 + MIR SINE MIR 101 225 -37 429 310 35 10 chr2 6706026 6706229 -243981625 - MLT1L LTR MaLR 0 615 408 22 0 0 0 chr2 6706413 6706435 -243981419 + AT_rich Low_complexity Low_complexity 1 22 0 34 79 0 0 chr2 6706552 6706628 -243981226 + AT_rich Low_complexity Low_complexity 1 76 0 3621 197 48 17 chr2 6706998 6707766 -243980088 + L1MC1 LINE L1 5542 6333 0 2131 111 7 10 chr2 6708099 6708396 -243979458 - AluSq SINE Alu -17 296 1 403 281 65 41 chr2 6708630 6708876 -243978978 - L1MEc LINE L1 -3679 2536 2285 211 122 41 0 chr2 6709001 6709050 -243978804 + (TA)n Simple_repeat Simple_repeat 2 52 0 270 306 35 57 chr2 6709397 6709812 -243978042 - L1MEc LINE L1 -768 1808 1361 379 309 67 49 chr2 6709909 6710194 -243977660 - L1MEc LINE L1 -5046 1159 870 180 0 0 0 chr2 6710880 6710900 -243976954 + (CAAAAA)n Simple_repeat Simple_repeat 1 20 0 439 285 56 56 chr2 6711015 6711229 -243976625 + Charlie8 DNA MER1_type 1 214 -2203 5485 20 0 0 chr2 6711686 6712271 -243975583 - L1PA3 LINE L1 -5 6150 5566 252 317 111 20 chr2 6713915 6714137 -243973717 + MIR3 SINE MIR 4 251 -11 673 234 19 6 chr2 6714567 6714725 -243973129 - MER58B DNA MER1_type 0 341 182 834 226 34 15 chr2 6714727 6714931 -243972923 + MER20 DNA MER1_type 3 210 -9 596 167 123 14 chr2 6714932 6715070 -243972784 - MER58B DNA MER1_type -152 189 37 37 39 0 0 chr2 6718507 6718558 -243969296 + AT_rich Low_complexity Low_complexity 1 51 0 253 280 167 15 chr2 6718808 6718940 -243968914 + MIR SINE MIR 1 152 -110 266 239 69 54 chr2 6718948 6719078 -243968776 - LTR67 LTR ERVL 0 557 426 2360 146 34 3 chr2 6719393 6719777 -243968077 + MSTA LTR MaLR 33 428 0 268 208 0 38 chr2 6721060 6721113 -243966741 - MER58A DNA MER1_type 0 224 174 1393 158 50 68 chr2 6721121 6721224 -243966630 + AluJb SINE Alu 11 114 -199 2929 71 3 3 chr2 6721224 6721577 -243966277 + THE1A LTR MaLR 3 355 0 1393 158 50 68 chr2 6721577 6721781 -243966073 + AluJb SINE Alu 114 313 0 638 236 54 7 chr2 6721789 6721937 -243965917 - MER58A DNA MER1_type -33 191 37 2089 172 9 78 chr2 6722286 6722533 -243965321 + MSTD LTR MaLR 1 208 -188 420 55 0 0 chr2 6722533 6722588 -243965266 + (CA)n Simple_repeat Simple_repeat 1 55 0 2089 172 9 78 chr2 6722588 6722765 -243965089 + MSTD LTR MaLR 208 396 0 2570 120 13 13 chr2 6723087 6723461 -243964393 - THE1C LTR MaLR -1 374 1 1561 219 22 35 chr2 6723461 6723824 -243964030 - MLT1A1 LTR MaLR -4 361 1 269 323 121 0 chr2 6724678 6724777 -243963077 + L3 LINE CR1 1373 1483 -94 625 245 41 41 chr2 6725760 6725956 -243961898 + MIR SINE MIR 46 241 -21 202 250 0 0 chr2 6725973 6726017 -243961837 - L2 LINE L2 -5 3308 3265 521 165 0 10 chr2 6726305 6726408 -243961446 + GA-rich Low_complexity Low_complexity 3 104 0 239 192 13 51 chr2 6727738 6727816 -243960038 + L1MC4 LINE L1 6615 6689 -1353 508 253 86 38 chr2 6727844 6728136 -243959718 - HAL1b LINE L1 -214 1134 829 243 347 0 24 chr2 6728138 6728262 -243959592 - L2 LINE L2 -942 2372 2252 30 69 0 0 chr2 6728720 6728778 -243959076 + AT_rich Low_complexity Low_complexity 1 58 0 5921 19 17 1 chr2 6728903 6729551 -243958303 - SVA Other Other -3 1383 726 2436 120 11 14 chr2 6729575 6729942 -243957912 - L1MA2 LINE L1 0 6304 5939 1312 252 132 12 chr2 6730440 6730857 -243956997 - MLT1C LTR MaLR 0 467 1 2307 116 34 45 chr2 6731476 6731636 -243956218 + THE1C LTR MaLR 1 161 -214 1963 153 7 0 chr2 6731636 6731924 -243955930 - AluSq SINE Alu -23 290 1 2307 116 34 45 chr2 6731924 6732142 -243955712 + THE1C LTR MaLR 161 375 0 26 30 0 0 chr2 6732250 6732283 -243955571 + AT_rich Low_complexity Low_complexity 1 33 0 2200 110 7 0 chr2 6733999 6734123 -243953731 + AluSg SINE Alu 1 123 -187 462 18 0 0 chr2 6734123 6734178 -243953676 + (CA)n Simple_repeat Simple_repeat 2 56 0 2200 110 7 0 chr2 6734178 6734361 -243953493 + AluSg SINE Alu 123 310 0 181 297 55 22 chr2 6734681 6734772 -243953082 + MIR SINE MIR 116 209 -53 2110 111 7 3 chr2 6734815 6735103 -243952751 - AluSx SINE Alu -23 289 1 798 222 94 35 chr2 6736214 6736496 -243951358 - MER33 DNA MER1_type -30 294 1 477 365 103 6 chr2 6736576 6736928 -243950926 - L2 LINE L2 -219 3053 2667 189 154 0 0 chr2 6737072 6737111 -243950743 + (TGGA)n Simple_repeat Simple_repeat 1 39 0 451 278 156 15 chr2 6737167 6737372 -243950482 - MIR SINE MIR -27 235 2 232 297 61 10 chr2 6737571 6737707 -243950147 - MIR SINE MIR -54 154 20 22 0 0 0 chr2 6737874 6737896 -243949958 + AT_rich Low_complexity Low_complexity 1 22 0 377 272 47 22 chr2 6738087 6738265 -243949589 + MIR SINE MIR 19 192 -59 256 293 109 23 chr2 6738434 6738608 -243949246 - MIR SINE MIR -55 207 19 542 254 48 12 chr2 6739269 6739434 -243948420 + MIR SINE MIR 28 198 -64 1016 205 89 13 chr2 6743095 6743408 -243944446 - MER33 DNA MER1_type -7 317 1 422 201 82 50 chr2 6744396 6744524 -243943330 - MER53 DNA DNA -25 164 29 1820 100 37 0 chr2 6744524 6744765 -243943089 - AluSx SINE Alu -20 292 43 422 201 82 50 chr2 6744765 6744795 -243943059 - MER53 DNA DNA -160 29 1 288 326 106 49 chr2 6744911 6745401 -243942453 - L2 LINE L2 -17 3296 2778 1959 169 28 11 chr2 6745860 6746099 -243941755 - MLT1B LTR MaLR 0 390 141 2085 113 0 61 chr2 6746099 6746425 -243941429 + AluSp SINE Alu 1 306 -7 1959 169 28 11 chr2 6746425 6746547 -243941307 - MLT1B LTR MaLR -249 141 23 1558 216 218 4 chr2 6749485 6749975 -243937879 - L1MB8 LINE L1 -1 6177 5583 234 0 0 0 chr2 6750322 6750348 -243937506 + (T)n Simple_repeat Simple_repeat 1 26 0 293 215 83 50 chr2 6751134 6751255 -243936599 - MER96B DNA MER1_type? -261 156 32 217 225 0 0 chr2 6751285 6751325 -243936529 + L2 LINE L2 3266 3305 -8 299 293 41 23 chr2 6751667 6751805 -243936049 + MIR SINE MIR 5 143 -68 231 358 0 33 chr2 6753320 6753440 -243934414 - MIR SINE MIR -114 148 33 240 35 0 0 chr2 6754994 6755023 -243932831 + (CA)n Simple_repeat Simple_repeat 2 30 0 1806 146 55 78 chr2 6755375 6755759 -243932095 + THE1C LTR MaLR 1 375 0 395 301 30 15 chr2 6755787 6755920 -243931934 - MIR SINE MIR -71 191 57 393 66 279 0 chr2 6756505 6756566 -243931288 + MADE1 DNA Mariner 3 80 0 2197 98 24 0 chr2 6756722 6757019 -243930835 + AluSg SINE Alu 1 304 -6 952 199 0 31 chr2 6757057 6757253 -243930601 + AluJo SINE Alu 120 309 -3 205 357 29 0 chr2 6757929 6757999 -243929855 + MIR SINE MIR 17 88 -120 1147 305 96 43 chr2 6758351 6758386 -243929468 + L1M4 LINE L1 2884 2916 -3230 2268 113 3 3 chr2 6758386 6758696 -243929158 + AluY SINE Alu 1 310 -1 1147 305 96 43 chr2 6758696 6760040 -243927814 + L1M4 LINE L1 2916 4335 -1811 22 35 0 0 chr2 6760122 6760151 -243927703 + AT_rich Low_complexity Low_complexity 1 29 0 226 244 136 97 chr2 6760497 6760776 -243927078 + L1ME3A LINE L1 5681 5970 -200 756 20 29 0 chr2 6760968 6761070 -243926784 + (TCTA)n Simple_repeat Simple_repeat 3 107 0 180 400 24 12 chr2 6763172 6763257 -243924597 - L2 LINE L2 -1 3271 3186 193 333 40 0 chr2 6763405 6763480 -243924374 + MIR SINE MIR 41 118 -90 238 315 54 50 chr2 6763675 6763975 -243923879 + L2 LINE L2 2858 3233 -39 437 263 112 16 chr2 6764643 6764829 -243923025 + MIR SINE MIR 45 250 -12 695 149 15 15 chr2 6765032 6765166 -243922688 + L1MB8 LINE L1 6044 6177 -1 187 352 193 0 chr2 6765347 6765492 -243922362 - L3 LINE CR1 -421 1156 984 241 366 77 11 chr2 6766265 6766448 -243921406 + MIR SINE MIR 62 256 -6 192 407 0 0 chr2 6766994 6767080 -243920774 + L2 LINE L2 3187 3272 0 190 299 43 17 chr2 6767603 6767720 -243920134 + MIR SINE MIR 27 146 -62 195 340 78 10 chr2 6768882 6768985 -243918869 - L2 LINE L2 -12 3260 3151 24 0 0 0 chr2 6770551 6770575 -243917279 + AT_rich Low_complexity Low_complexity 1 24 0 1523 234 45 52 chr2 6770713 6771178 -243916676 + MLT1C LTR MaLR 6 467 0 600 40 0 0 chr2 6771562 6771637 -243916217 + (TGG)n Simple_repeat Simple_repeat 2 76 0 950 265 71 58 chr2 6772374 6772702 -243915152 + MER77 LTR ERV1 281 673 -6 198 227 281 47 chr2 6772880 6773008 -243914846 + L2 LINE L2 3102 3259 -13 1268 206 27 108 chr2 6773130 6773537 -243914317 - MLT1A2 LTR MaLR 0 374 1 688 281 33 54 chr2 6774856 6775098 -243912756 + MIR SINE MIR 16 252 -10 3637 174 73 4 chr2 6775639 6776323 -243911531 + L1MB2 LINE L1 5439 6169 -2 223 362 122 31 chr2 6776340 6776594 -243911260 - L2 LINE L2 -61 3211 2935 555 191 19 0 chr2 6777419 6777581 -243910273 + GA-rich Low_complexity Low_complexity 2 166 0 406 275 74 11 chr2 6778010 6778080 -243909774 - MIR SINE MIR -16 246 182 2232 174 100 55 chr2 6778080 6778610 -243909244 + MLT2B3 LTR ERVL 1 554 0 406 275 74 11 chr2 6778610 6778728 -243909126 - MIR SINE MIR -80 182 46 2319 132 90 25 chr2 6778898 6779300 -243908554 + MSTA LTR MaLR 1 428 0 203 225 0 127 chr2 6779890 6779914 -243907940 - MER5A DNA MER1_type 0 189 164 2853 86 11 0 chr2 6779914 6780265 -243907589 - THE1A LTR MaLR 0 355 1 12201 96 5 10 chr2 6780265 6781853 -243906001 - THE1A-int LTR MaLR 0 1580 1 2818 91 11 0 chr2 6781853 6782204 -243905650 - THE1A LTR MaLR 0 355 1 203 225 0 127 chr2 6782204 6782248 -243905606 - MER5A DNA MER1_type -22 167 128 217 320 62 23 chr2 6782277 6782405 -243905449 + MER5A DNA MER1_type 55 187 -2 * 732 178 8 0 chr2 6782292 6782421 -243905433 - MER5A DNA MER1_type -59 130 1 395 242 6 19 chr2 6782745 6782902 -243904952 + (TA)n Simple_repeat Simple_repeat 1 155 0 210 353 118 0 chr2 6783400 6783519 -243904335 - L2 LINE L2 0 3313 3181 442 248 16 40 chr2 6783838 6783963 -243903891 - MER5A DNA MER1_type -64 125 4 368 255 101 13 chr2 6784563 6784712 -243903142 - LTR33 LTR ERVL -5 516 355 270 254 0 14 chr2 6785788 6785859 -243901995 + MIR SINE MIR 22 91 -117 1592 243 200 20 chr2 6786158 6786702 -243901152 - MLT1E1 LTR MaLR 0 654 13 5329 118 22 4 chr2 6787584 6788249 -243899605 - L1PA13 LINE L1 0 6163 5479 195 42 0 0 chr2 6788249 6788273 -243899581 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5329 118 22 4 chr2 6788273 6788411 -243899443 - L1PA13 LINE L1 -684 5479 5345 22 56 0 0 chr2 6789152 6789188 -243898666 + AT_rich Low_complexity Low_complexity 1 36 0 401 375 48 39 chr2 6789231 6789339 -243898515 - L2 LINE L2 -664 2650 2545 2223 107 7 3 chr2 6789339 6789648 -243898206 - AluSq SINE Alu -3 310 1 401 375 48 39 chr2 6789648 6789952 -243897902 - L2 LINE L2 -769 2545 2234 206 271 43 107 chr2 6790353 6790493 -243897361 + L2 LINE L2 2710 2840 -474 212 278 72 31 chr2 6790729 6790826 -243897028 - L2 LINE L2 -641 2673 2573 445 264 0 16 chr2 6790827 6790952 -243896902 - LTR67 LTR ERVL -2 555 433 189 322 252 9 chr2 6791799 6791914 -243895940 + MIR3 SINE MIR 46 188 -20 22 35 0 0 chr2 6792143 6792172 -243895682 + AT_rich Low_complexity Low_complexity 1 29 0 213 65 0 0 chr2 6793492 6793523 -243894331 + (CA)n Simple_repeat Simple_repeat 2 32 0 449 204 25 0 chr2 6794171 6794333 -243893521 + GA-rich Low_complexity Low_complexity 2 167 0 487 348 14 9 chr2 6796672 6796882 -243890972 + MIR SINE MIR 31 241 -21 1189 132 0 0 chr2 6797156 6797323 -243890531 + AluSg/x SINE Alu 131 297 -13 216 243 0 57 chr2 6798768 6798838 -243889016 + MIR SINE MIR 108 173 -89 300 262 138 28 chr2 6799148 6799293 -243888561 - MIR SINE MIR -70 192 32 208 284 27 54 chr2 6800603 6800677 -243887177 - MIR SINE MIR -59 149 78 222 298 18 0 chr2 6802149 6802206 -243885648 - MIR SINE MIR -59 149 92 188 292 106 18 chr2 6802644 6802757 -243885097 + MIR SINE MIR 85 207 -55 8057 213 48 37 chr2 6803131 6806986 -243880868 - L1MC1 LINE L1 0 6613 2801 2590 21 10 0 chr2 6806986 6807275 -243880579 - L1PA4 LINE L1 0 6155 5864 8057 213 48 37 chr2 6807275 6808785 -243879069 - L1MC1 LINE L1 -3812 2801 883 1702 197 43 70 chr2 6808785 6809226 -243878628 + MSTB1 LTR MaLR 4 432 0 8057 213 48 37 chr2 6809226 6810090 -243877764 - L1MC1 LINE L1 -5730 883 30 335 305 30 15 chr2 6810956 6811087 -243876767 - MIR SINE MIR -81 181 49 518 271 45 40 chr2 6813265 6813512 -243874342 + LTR16A LTR ERVL 203 450 0 183 331 96 45 chr2 6814088 6814266 -243873588 - L2 LINE L2 -512 2802 2616 198 0 0 0 chr2 6814677 6814699 -243873155 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 1266 184 53 26 chr2 6815046 6815312 -243872542 + AluJb SINE Alu 1 273 -39 316 325 88 18 chr2 6815799 6815913 -243871941 - MER5B DNA MER1_type -3 175 54 241 299 37 110 chr2 6815822 6815986 -243871868 + MER5A DNA MER1_type 38 189 0 * 2356 114 0 0 chr2 6816444 6816750 -243871104 + AluSp SINE Alu 1 306 -7 348 167 0 0 chr2 6816795 6816867 -243870987 + GA-rich Low_complexity Low_complexity 2 73 0 617 250 43 6 chr2 6816869 6817033 -243870821 + MIR SINE MIR 88 257 -5 300 329 71 52 chr2 6817065 6817530 -243870324 - L1MC4a LINE L1 -1914 5894 5421 227 173 19 0 chr2 6817767 6817819 -243870035 + (TAGA)n Simple_repeat Simple_repeat 3 55 0 245 298 25 0 chr2 6817841 6817962 -243869892 + (TAGA)n Simple_repeat Simple_repeat 4 127 0 243 256 61 24 chr2 6818130 6818212 -243869642 + MIR SINE MIR 62 146 -62 258 295 40 0 chr2 6818311 6818410 -243869444 - MIR SINE MIR -88 120 47 22 35 0 0 chr2 6818648 6818677 -243869177 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 6819995 6820016 -243867838 + AT_rich Low_complexity Low_complexity 1 21 0 482 225 152 67 chr2 6820608 6821086 -243866768 + LTR50 LTR ERVL 9 605 -190 340 184 38 0 chr2 6821105 6821192 -243866662 + LTR50 LTR ERVL 435 795 0 647 262 50 54 chr2 6824359 6824657 -243863197 + MER102b DNA MER1_type 37 333 -8 305 222 69 56 chr2 6824949 6825093 -243862761 + L1M4 LINE L1 4129 4274 -1872 283 302 167 49 chr2 6825107 6825505 -243862349 - L2 LINE L2 0 3313 2779 711 281 84 39 chr2 6825608 6826024 -243861830 + LTR16A LTR ERVL 7 441 -9 709 292 112 4 chr2 6826164 6826397 -243861457 - L2 LINE L2 -987 2327 2070 378 329 42 42 chr2 6826428 6826741 -243861113 + L1ME3A LINE L1 5635 5947 -223 1885 139 14 0 chr2 6826876 6827189 -243860665 - AluSx SINE Alu 0 317 1 473 338 29 10 chr2 6827416 6827620 -243860234 - MIR SINE MIR -24 238 31 223 265 60 0 chr2 6827994 6828077 -243859777 - MIR3 SINE MIR -21 187 100 579 267 28 17 chr2 6828114 6828290 -243859564 - MER5B DNA MER1_type 0 178 1 1330 202 5 5 chr2 6828685 6828908 -243858946 - MER58A DNA MER1_type 0 224 2 2025 124 0 0 chr2 6830038 6830355 -243857499 + AluSx SINE Alu 16 332 0 408 336 36 54 chr2 6830680 6830957 -243856897 - L2 LINE L2 0 3272 3001 297 362 52 24 chr2 6833105 6833315 -243854539 + MIR SINE MIR 47 262 0 1735 145 69 0 chr2 6833358 6833648 -243854206 + THE1B LTR MaLR 1 310 -54 674 124 0 0 chr2 6833648 6833745 -243854109 + AluY SINE Alu 213 309 -2 566 69 0 0 chr2 6833748 6833820 -243854034 + THE1B LTR MaLR 293 364 0 198 91 0 0 chr2 6834460 6834493 -243853361 + (CA)n Simple_repeat Simple_repeat 1 33 0 1986 110 43 17 chr2 6835178 6835511 -243852343 - AluSc SINE Alu 0 341 1 442 258 11 84 chr2 6835543 6835721 -243852133 - MLT1J1 LTR MaLR -236 210 46 32 57 0 0 chr2 6836486 6836539 -243851315 + AT_rich Low_complexity Low_complexity 1 53 0 2028 130 0 13 chr2 6836953 6837253 -243850601 - AluSx SINE Alu -16 296 1 372 347 103 9 chr2 6837634 6837847 -243850007 - MIR SINE MIR -10 252 20 701 256 137 27 chr2 6838109 6838371 -243849483 - LTR40a LTR ERVL -120 399 109 345 309 112 15 chr2 6838618 6838958 -243848896 + L1ME4a LINE L1 5542 5914 -207 2071 98 0 17 chr2 6839414 6839746 -243848108 - AluY SINE Alu 0 327 1 196 341 93 37 chr2 6839909 6840155 -243847699 + L2 LINE L2 2834 3093 -179 927 209 82 19 chr2 6842956 6843162 -243844692 + MER20 DNA MER1_type 1 219 0 292 280 41 113 chr2 6843163 6843367 -243844487 - MIR SINE MIR -40 168 11 271 175 16 63 chr2 6844872 6844935 -243842919 - L2 LINE L2 -7 3265 3206 389 352 6 0 chr2 6845974 6846153 -243841701 + (TG)n Simple_repeat Simple_repeat 1 180 0 204 230 169 80 chr2 6847155 6847368 -243840486 + MIR SINE MIR 3 234 -28 23 54 0 0 chr2 6847659 6847696 -243840158 + AT_rich Low_complexity Low_complexity 1 37 0 534 211 0 10 chr2 6847829 6847933 -243839921 + MER63 DNA MER1_type 21 749 -313 1762 161 10 3 chr2 6849213 6849504 -243838350 - AluSx SINE Alu -19 293 1 244 135 0 0 chr2 6849504 6849541 -243838313 + MSTB LTR MaLR 386 422 -4 271 282 51 26 chr2 6849579 6849696 -243838158 - L1ME LINE L1 -409 5712 5593 192 236 55 0 chr2 6849952 6850007 -243837847 + L2 LINE L2 3254 3311 -2 1810 197 120 63 chr2 6850339 6850897 -243836957 - L1MD2 LINE L1 -10 6743 6154 1951 215 19 74 chr2 6850972 6851748 -243836106 - L1MD2 LINE L1 -488 6148 5402 6938 239 87 42 chr2 6852012 6853113 -243834741 - L1MD2 LINE L1 -1302 5238 4188 6452 103 24 1 chr2 6853113 6854096 -243833758 + L1PA10 LINE L1 5158 6163 -5 6938 239 87 42 chr2 6854096 6856353 -243831501 - L1MD2 LINE L1 -2352 4188 1626 2432 66 7 0 chr2 6856353 6856654 -243831200 + AluY SINE Alu 1 303 -8 6938 239 87 42 chr2 6856654 6857749 -243830105 - L1MD2 LINE L1 -4914 1626 582 207 0 0 0 chr2 6858359 6858382 -243829472 + (T)n Simple_repeat Simple_repeat 1 23 0 28 48 0 0 chr2 6858672 6858714 -243829140 + AT_rich Low_complexity Low_complexity 1 42 0 2431 69 0 0 chr2 6858947 6859235 -243828619 - AluY SINE Alu -12 299 12 365 283 75 100 chr2 6859243 6859632 -243828222 - MLT1J LTR MaLR -132 379 1 987 105 0 0 chr2 6859952 6860085 -243827769 - L1MA3 LINE L1 0 6305 6173 552 81 35 0 chr2 6860016 6860107 -243827747 - L1MA3 LINE L1 -63 6241 6134 2289 105 0 13 chr2 6862194 6862507 -243825347 + AluSg SINE Alu 1 309 -1 429 302 166 27 chr2 6862820 6863158 -243824696 + MLT1I LTR MaLR 19 403 -6 212 344 21 52 chr2 6863221 6863413 -243824441 - MIR SINE MIR -71 191 6 2459 77 0 0 chr2 6863613 6863924 -243823930 + AluY SINE Alu 1 311 0 2332 149 22 75 chr2 6866821 6867312 -243820542 + MLT1C LTR MaLR 1 465 -2 240 254 0 30 chr2 6869251 6869318 -243818536 + GA-rich Low_complexity Low_complexity 1 65 0 2190 105 3 35 chr2 6869769 6870084 -243817770 + AluSx SINE Alu 1 305 -7 323 236 25 70 chr2 6870477 6870634 -243817220 + L1M4 LINE L1 3077 3226 -2920 314 344 133 16 chr2 6870663 6871099 -243816755 + L1M4 LINE L1 4005 4491 -1655 257 255 213 58 chr2 6872027 6872215 -243815639 + L2 LINE L2 989 1205 -2109 10163 206 52 15 chr2 6872386 6873517 -243814337 + L1 LINE L1 2220 3308 -2838 1631 170 19 47 chr2 6873517 6873835 -243814019 + AluJb SINE Alu 1 309 -3 10163 206 52 15 chr2 6873835 6875202 -243812652 + L1 LINE L1 3308 4810 -1336 788 148 0 0 chr2 6875203 6875338 -243812516 + L1 LINE L1 3625 3759 -2387 227 205 0 0 chr2 6875357 6875396 -243812458 - AluJ/monomer SINE Alu -262 40 2 2959 220 59 7 chr2 6875398 6876140 -243811714 + L1MD2 LINE L1 5576 6356 -3 3211 264 105 27 chr2 6876169 6878074 -243809780 + L1ME1 LINE L1 2362 4410 -1805 2723 221 71 60 chr2 6878084 6878573 -243809281 + L1ME1 LINE L1 4805 5287 -948 195 42 0 0 chr2 6878573 6878597 -243809257 + (TA)n Simple_repeat Simple_repeat 2 25 0 2723 221 71 60 chr2 6878597 6879173 -243808681 + L1ME1 LINE L1 5287 5898 -337 2360 124 23 3 chr2 6879173 6879527 -243808327 + THE1B LTR MaLR 4 364 0 2723 221 71 60 chr2 6879527 6879861 -243807993 + L1ME1 LINE L1 5898 6227 -8 956 113 17 17 chr2 6879976 6880018 -243807836 + (GGAA)n Simple_repeat Simple_repeat 1 219 0 956 113 17 17 chr2 6880018 6880195 -243807659 + (GGAA)n Simple_repeat Simple_repeat 3 179 0 961 129 23 4 chr2 6880455 6880678 -243807176 + GA-rich Low_complexity Low_complexity 3 228 0 531 103 19 37 chr2 6880678 6880785 -243807069 + (GAAAA)n Simple_repeat Simple_repeat 4 108 0 221 320 0 27 chr2 6882247 6882322 -243805532 + L2 LINE L2 3190 3262 -10 212 234 0 0 chr2 6882380 6882427 -243805427 + (TG)n Simple_repeat Simple_repeat 2 48 0 506 257 33 26 chr2 6883194 6883346 -243804508 - MIR SINE MIR -46 216 64 23 33 0 0 chr2 6883367 6883397 -243804457 + AT_rich Low_complexity Low_complexity 1 30 0 808 282 32 70 chr2 6883803 6884215 -243803639 + L2 LINE L2 2915 3310 -3 2747 208 10 32 chr2 6884428 6884609 -243803245 + L1MC1 LINE L1 4982 5166 -1167 1991 109 40 0 chr2 6884609 6884885 -243802969 + AluSx SINE Alu 13 299 -13 2747 208 10 32 chr2 6884885 6885527 -243802327 + L1MC1 LINE L1 5166 5916 -417 630 331 71 21 chr2 6885528 6885857 -243801997 - MLT1G LTR MaLR -289 301 1 1271 266 35 36 chr2 6885982 6886368 -243801486 + L1M4 LINE L1 2971 3357 -2789 2242 89 0 20 chr2 6886368 6886672 -243801182 - AluY SINE Alu -13 298 1 1271 266 35 36 chr2 6886672 6886916 -243800938 + L1M4 LINE L1 3357 3600 -2546 305 221 0 11 chr2 6886916 6887011 -243800843 + (TA)n Simple_repeat Simple_repeat 1 94 0 818 94 109 0 chr2 6887012 6887140 -243800714 + AluY SINE Alu 39 180 -131 30 83 0 0 chr2 6887140 6887176 -243800678 + AT_rich Low_complexity Low_complexity 1 36 0 25 0 0 0 chr2 6887235 6887260 -243800594 + AT_rich Low_complexity Low_complexity 1 25 0 261 0 0 0 chr2 6887272 6887301 -243800553 + (TA)n Simple_repeat Simple_repeat 1 29 0 841 227 14 5 chr2 6887359 6887566 -243800288 - L1ME1 LINE L1 -223 5943 5735 959 126 0 0 chr2 6887717 6887868 -243799986 + L1PA15 LINE L1 6011 6161 -4 262 89 18 18 chr2 6888987 6889043 -243798811 + (TTTG)n Simple_repeat Simple_repeat 2 57 0 276 250 29 0 chr2 6889243 6889311 -243798543 - MIR SINE MIR -108 154 85 2037 183 22 79 chr2 6890427 6890920 -243796934 - MLT1C LTR MaLR 0 467 3 220 236 0 18 chr2 6891356 6891411 -243796443 + A-rich Low_complexity Low_complexity 2 55 0 184 183 300 0 chr2 6892015 6892075 -243795779 + L2 LINE L2 3204 3281 -32 195 100 0 0 chr2 6892142 6892172 -243795682 + (TGAA)n Simple_repeat Simple_repeat 4 33 0 3076 176 64 3 chr2 6892313 6893084 -243794770 + L1M2 LINE L1 4673 5496 -743 494 170 7 35 chr2 6893226 6893367 -243794487 + GA-rich Low_complexity Low_complexity 2 138 0 402 299 75 31 chr2 6894901 6895185 -243792669 - L1MDa LINE L1 -3854 2686 2395 2269 171 15 20 chr2 6895582 6896066 -243791788 - Tigger2 DNA MER2_type 0 2718 2 881 158 23 0 chr2 6896400 6896577 -243791277 - L1MA7 LINE L1 0 6291 6111 243 384 31 40 chr2 6896935 6897159 -243790695 - L1MDa LINE L1 -5476 1054 833 315 0 0 0 chr2 6897502 6897537 -243790317 + (CA)n Simple_repeat Simple_repeat 2 36 0 231 125 0 0 chr2 6897537 6897577 -243790277 + (GA)n Simple_repeat Simple_repeat 1 40 0 475 245 21 75 chr2 6898137 6898325 -243789529 - MLT1J LTR MaLR -31 480 303 237 345 63 21 chr2 6898833 6898975 -243788879 + MIR SINE MIR 21 168 -94 203 314 144 0 chr2 6899449 6899567 -243788287 + L2 LINE L2 3179 3313 0 2012 147 3 0 chr2 6900869 6901162 -243786692 - AluSx SINE Alu -18 294 1 230 277 50 0 chr2 6901165 6901284 -243786570 - L1ME LINE L1 -230 5891 5767 1660 227 164 41 chr2 6901770 6902449 -243785405 + LTR41 LTR ERVL 1 762 -11 21 0 0 0 chr2 6902758 6902779 -243785075 + AT_rich Low_complexity Low_complexity 1 21 0 648 286 6 6 chr2 6902939 6903121 -243784733 + MER58A DNA MER1_type 43 224 0 329 350 127 0 chr2 6903247 6903467 -243784387 + MIR SINE MIR 2 249 -13 188 262 66 16 chr2 6903520 6903581 -243784273 - MIR SINE MIR -188 74 11 1413 211 156 70 chr2 6903827 6904429 -243783425 + MLT1E1 LTR MaLR 1 654 0 1894 262 44 30 chr2 6905092 6905702 -243782152 - MLT1E2 LTR MaLR -7 619 1 206 391 64 9 chr2 6906939 6907049 -243780805 + L2 LINE L2 3137 3252 -20 241 367 143 35 chr2 6909286 6909711 -243778143 - L2 LINE L2 -661 2653 2183 204 286 18 0 chr2 6910413 6910469 -243777385 + MER5A DNA MER1_type 9 65 -124 28 29 0 0 chr2 6910911 6910946 -243776908 + AT_rich Low_complexity Low_complexity 1 35 0 216 256 105 12 chr2 6912304 6912390 -243775464 - MIR SINE MIR -61 147 54 295 263 12 12 chr2 6913322 6913402 -243774452 - MIR3 SINE MIR -31 177 98 21 36 0 0 chr2 6914711 6914739 -243773115 + AT_rich Low_complexity Low_complexity 1 28 0 2437 88 3 3 chr2 6916018 6916325 -243771529 - AluSq SINE Alu -6 307 1 343 333 62 23 chr2 6916436 6916613 -243771241 + MIR SINE MIR 46 229 -33 588 197 79 17 chr2 6916809 6916987 -243770867 - MER53 DNA DNA 0 189 1 1938 145 26 57 chr2 6917527 6917913 -243769941 - THE1C LTR MaLR -1 374 1 2281 113 0 3 chr2 6918430 6918731 -243769123 + AluSx SINE Alu 1 300 -12 462 157 0 0 chr2 6919258 6919341 -243768513 + CT-rich Low_complexity Low_complexity 2 84 0 3041 82 42 5 chr2 6919430 6919858 -243767996 - MLT2A1 LTR ERVL 0 444 1 1552 232 132 5 chr2 6919885 6920333 -243767521 - MLT1D LTR MaLR 0 505 1 1821 161 3 25 chr2 6921089 6921405 -243766449 + AluSx SINE Alu 1 309 -3 438 215 27 102 chr2 6921661 6921847 -243766007 - MER69A DNA AcHobo 0 177 6 474 224 5 170 chr2 6921952 6922175 -243765679 + MER5A DNA MER1_type 1 186 -3 5541 62 19 27 chr2 6923089 6923861 -243763993 + MER4E LTR ERV1 1 766 0 1774 225 66 4 chr2 6925095 6925567 -243762287 - L1MC2 LINE L1 -18 6326 5826 2237 242 21 5 chr2 6925574 6926226 -243761628 - L1MC2 LINE L1 -943 5203 4541 351 100 43 0 chr2 6926237 6926307 -243761547 + (TA)n Simple_repeat Simple_repeat 2 74 0 448 104 0 0 chr2 6926365 6926432 -243761422 - L1PA5 LINE L1 -6 6148 6082 2000 24 8 0 chr2 6926432 6926679 -243761175 + L1P2 LINE L1 5369 5617 -537 * 5296 264 22 17 chr2 6926673 6928697 -243759157 - L1MC2 LINE L1 -1589 4557 2524 487 371 79 21 chr2 6929041 6929459 -243758395 - L2 LINE L2 -794 2520 2079 2702 101 15 2 chr2 6929986 6930383 -243757471 - L1MA1 LINE L1 -9 6293 5892 2155 261 69 28 chr2 6930509 6931637 -243756217 - L1ME1 LINE L1 -80 6086 4913 2105 121 3 13 chr2 6933089 6933403 -243754451 - AluY SINE Alu 0 311 1 416 317 194 30 chr2 6934756 6935188 -243752666 - L2 LINE L2 -7 3306 2804 2263 122 42 11 chr2 6935193 6935546 -243752308 - THE1B LTR MaLR 0 364 1 2795 161 73 19 chr2 6935654 6936299 -243751555 + L1MB3 LINE L1 5497 6176 -7 248 258 39 62 chr2 6936305 6936433 -243751421 - L2 LINE L2 -609 2705 2581 694 309 69 69 chr2 6936474 6936584 -243751270 - L2 LINE L2 -1504 1810 1701 207 0 0 0 chr2 6936584 6936607 -243751247 + (TG)n Simple_repeat Simple_repeat 1 23 0 694 309 69 69 chr2 6936607 6937078 -243750776 - L2 LINE L2 -1612 1702 1229 188 244 0 0 chr2 6937093 6937134 -243750720 - MIR SINE MIR -71 191 151 188 217 206 33 chr2 6937315 6937407 -243750447 - MIR SINE MIR -141 121 14 5290 160 10 15 chr2 6938334 6939501 -243748353 + L1MA4 LINE L1 5129 6289 -11 260 212 182 15 chr2 6939633 6939765 -243748089 + L1ME LINE L1 5492 5645 -476 295 250 0 0 chr2 6940172 6940240 -243747614 + MIR SINE MIR 176 243 -19 274 221 26 26 chr2 6940322 6940399 -243747455 + CT-rich Low_complexity Low_complexity 3 79 0 23 0 0 0 chr2 6941602 6941625 -243746229 + AT_rich Low_complexity Low_complexity 1 23 0 190 230 46 92 chr2 6941744 6941831 -243746023 + L2 LINE L2 3231 3313 0 201 356 53 53 chr2 6941911 6942043 -243745811 + L2 LINE L2 3137 3268 -4 1283 226 3 66 chr2 6943167 6943485 -243744369 + AluJb SINE Alu 14 311 -1 474 274 48 12 chr2 6943850 6944018 -243743836 + MLT1I LTR MaLR 201 374 -35 480 198 0 0 chr2 6944020 6944101 -243743753 - FLAM_A SINE Alu -36 106 26 1257 226 54 11 chr2 6944253 6944603 -243743251 - MLT1A1 LTR MaLR 0 365 1 349 309 147 6 chr2 6945308 6945507 -243742347 - MIR SINE MIR -11 251 27 3448 38 38 0 chr2 6945687 6946138 -243741716 + L1P LINE L1 4545 5012 -1134 7657 148 11 46 chr2 6947427 6948911 -243738943 - THE1C-int LTR MaLR -145 1435 4 1761 144 79 20 chr2 6948914 6949268 -243738586 - THE1C LTR MaLR 0 375 1 326 296 82 60 chr2 6949624 6949857 -243737997 + MIR SINE MIR 20 257 -5 1421 248 86 9 chr2 6949893 6950348 -243737506 - MLT1E2 LTR MaLR 0 626 137 182 269 31 125 chr2 6950512 6950672 -243737182 + MIR SINE MIR 68 212 -50 26 0 0 0 chr2 6950805 6950831 -243737023 + AT_rich Low_complexity Low_complexity 1 26 0 12878 167 56 10 chr2 6950832 6956789 -243731065 - L1PB1 LINE L1 -1 6866 636 994 183 5 0 chr2 6956791 6956988 -243730866 - L1PB1 LINE L1 -6663 200 3 184 315 0 19 chr2 6957525 6957579 -243730275 + MIR SINE MIR 23 75 -187 217 320 57 41 chr2 6957878 6958000 -243729854 - MIR SINE MIR -137 125 2 1379 246 47 27 chr2 6959335 6959783 -243728071 + LTR40b LTR ERVL 6 462 0 290 215 31 0 chr2 6959845 6959910 -243727944 + HERVL40 LTR ERVL 2830 2896 -2634 845 265 13 22 chr2 6961000 6961331 -243726523 + HERVL40 LTR ERVL 2779 5505 -25 1107 276 63 15 chr2 6961353 6961763 -243726091 + LTR40b LTR ERVL 1 430 -32 433 257 138 84 chr2 6961787 6962083 -243725771 + L2 LINE L2 2994 3305 -8 2238 119 0 0 chr2 6963581 6963875 -243723979 + AluSg SINE Alu 1 294 -16 312 296 136 12 chr2 6964130 6964299 -243723555 - L1ME2 LINE L1 -226 5938 5749 201 262 0 0 chr2 6966112 6966154 -243721700 + T-rich Low_complexity Low_complexity 3 44 0 662 311 19 0 chr2 6967138 6967350 -243720504 - MIR SINE MIR 0 262 47 364 355 11 26 chr2 6968325 6968514 -243719340 - MER5A DNA MER1_type -3 186 1 1385 259 25 57 chr2 6968968 6969701 -243718153 - L1M4 LINE L1 -2203 4179 3471 2111 132 0 0 chr2 6969880 6970168 -243717686 + AluSx SINE Alu 1 288 -24 26 30 0 0 chr2 6970193 6970226 -243717628 + AT_rich Low_complexity Low_complexity 1 33 0 334 246 165 50 chr2 6970226 6970455 -243717399 - L1ME LINE L1 -5477 593 329 186 43 0 0 chr2 6970455 6970478 -243717376 + (TTCTC)n Simple_repeat Simple_repeat 2 24 0 334 246 165 50 chr2 6970478 6970508 -243717346 - L1ME LINE L1 -5741 329 304 490 281 25 20 chr2 6970520 6970716 -243717138 - L1ME LINE L1 -5867 203 7 245 325 17 38 chr2 6970804 6971044 -243716810 - L1MEc LINE L1 -4781 1436 1202 1191 218 128 22 chr2 6971054 6971421 -243716433 + LTR52 LTR ERVL 1 406 -15 375 336 40 57 chr2 6971530 6972695 -243715159 - L1MEc LINE L1 -5176 1220 76 425 224 9 9 chr2 6973205 6973312 -243714542 + L1M4 LINE L1 4898 5004 -1142 224 308 112 65 chr2 6973463 6973632 -243714222 - L2 LINE L2 -158 3114 2938 248 230 143 0 chr2 6974567 6974693 -243713161 + L1ME4a LINE L1 5977 6120 -1 32 86 0 0 chr2 6974743 6974824 -243713030 + AT_rich Low_complexity Low_complexity 1 81 0 467 89 0 13 chr2 6975636 6975715 -243712139 + (GA)n Simple_repeat Simple_repeat 1 78 0 875 186 94 144 chr2 6975715 6976096 -243711758 - MLT1A1 LTR MaLR -3 362 1 218 200 0 20 chr2 6976096 6976146 -243711708 + GA-rich Low_complexity Low_complexity 1 49 0 1431 50 0 0 chr2 6976187 6976367 -243711487 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 243 88 0 0 chr2 6976367 6976401 -243711453 + (GGGA)n Simple_repeat Simple_repeat 1 34 0 295 250 0 93 chr2 6977395 6977456 -243710398 - L2 LINE L2 -38 3275 3227 2074 169 25 0 chr2 6977456 6977810 -243710044 + THE1B LTR MaLR 2 364 0 295 250 0 93 chr2 6977810 6977856 -243709998 - L2 LINE L2 -86 3227 3178 206 337 11 11 chr2 6978215 6978310 -243709544 - L2 LINE L2 -571 2743 2649 1776 181 68 32 chr2 6978551 6978992 -243708862 - LTR2B LTR ERV1 0 490 34 955 322 123 4 chr2 6979374 6979828 -243708026 + L2 LINE L2 2208 2715 -599 21 36 0 0 chr2 6979829 6979857 -243707997 + AT_rich Low_complexity Low_complexity 1 28 0 301 349 90 42 chr2 6980265 6980454 -243707400 - L2 LINE L2 0 3272 3075 359 195 0 12 chr2 6981011 6981093 -243706761 - L1MA5 LINE L1 -6 6294 6214 1297 194 3 3 chr2 6981093 6981377 -243706477 + L1 LINE L1 4960 5243 -903 183 333 0 0 chr2 6982693 6982756 -243705098 + L2 LINE L2 3176 3238 -75 5290 66 25 29 chr2 6984427 6985196 -243702658 - MER4E LTR ERV1 0 766 1 561 240 5 163 chr2 6986107 6986328 -243701526 - MER5A DNA MER1_type -3 186 1 430 192 30 114 chr2 6986433 6986600 -243701254 + MER69A DNA AcHobo 6 158 -19 429 137 26 0 chr2 6986643 6986760 -243701094 + (TA)n Simple_repeat Simple_repeat 1 120 0 208 356 0 11 chr2 6987044 6987134 -243700720 + L2 LINE L2 3213 3301 -12 358 328 78 10 chr2 6987216 6987420 -243700434 - MIR SINE MIR -39 223 6 2328 105 3 0 chr2 6987457 6987761 -243700093 + AluSp SINE Alu 4 308 -5 525 142 35 0 chr2 6988739 6988908 -243698946 + (TA)n Simple_repeat Simple_repeat 2 176 0 35 0 0 0 chr2 6988911 6988946 -243698908 + AT_rich Low_complexity Low_complexity 1 35 0 192 300 125 33 chr2 6991146 6991266 -243696588 - L2 LINE L2 -4 3268 3138 23 0 0 0 chr2 6991467 6991490 -243696364 + AT_rich Low_complexity Low_complexity 1 23 0 225 191 0 0 chr2 6992065 6992107 -243695747 + (CA)n Simple_repeat Simple_repeat 2 43 0 1991 147 7 0 chr2 6992793 6993086 -243694768 - AluSx SINE Alu -17 295 1 730 242 28 22 chr2 6993175 6993357 -243694497 + MER5A DNA MER1_type 1 183 -6 472 139 13 0 chr2 6993995 6994074 -243693780 + MADE1 DNA Mariner 1 80 0 196 333 26 9 chr2 6994118 6994232 -243693622 - MIR3 SINE MIR -6 202 87 427 287 187 5 chr2 6994404 6994613 -243693241 - Charlie8 DNA MER1_type -2161 256 10 341 333 0 0 chr2 6994956 6995046 -243692808 - MER5B DNA MER1_type -25 153 64 21 0 0 0 chr2 6995846 6995867 -243691987 + AT_rich Low_complexity Low_complexity 1 21 0 721 315 58 46 chr2 6996210 6996626 -243691228 - L2 LINE L2 -804 2510 2090 225 180 0 0 chr2 6996639 6996689 -243691165 + (TA)n Simple_repeat Simple_repeat 2 51 0 194 284 149 0 chr2 6996692 6996826 -243691028 + L2 LINE L2 3098 3251 -62 1568 307 109 42 chr2 6996974 6998404 -243689450 + L1ME3A LINE L1 3806 5331 -815 252 347 10 15 chr2 6998437 6998633 -243689221 + L1P5 LINE L1 5378 5572 -584 442 321 141 17 chr2 6998647 6998946 -243688908 + L1ME3A LINE L1 5619 5954 -216 3085 129 18 60 chr2 6999355 6999905 -243687949 - MER1A DNA MER1_type 0 527 1 683 314 9 14 chr2 7000957 7001177 -243686677 + MIR SINE MIR 31 249 -13 228 35 0 0 chr2 7002396 7002425 -243685429 + (TG)n Simple_repeat Simple_repeat 1 29 0 2085 149 21 21 chr2 7002799 7003174 -243684680 - THE1C LTR MaLR 0 375 1 379 292 35 70 chr2 7003577 7003892 -243683962 - L1ME LINE L1 -335 5786 5483 258 150 0 0 chr2 7004602 7004642 -243683212 + L2 LINE L2 3255 3294 -19 1112 153 0 0 chr2 7005189 7005373 -243682481 - AluSg/x SINE Alu 0 314 131 295 266 53 72 chr2 7005527 7005734 -243682120 - MLT1I LTR MaLR -16 393 191 327 49 0 0 chr2 7006001 7006042 -243681812 + (TC)n Simple_repeat Simple_repeat 1 41 0 246 32 0 0 chr2 7006041 7006072 -243681782 + (CA)n Simple_repeat Simple_repeat 1 31 0 * 2160 113 0 7 chr2 7006751 7007043 -243680811 + AluSg SINE Alu 1 290 -20 255 292 0 21 chr2 7007130 7007226 -243680628 - MLT1J LTR MaLR -145 366 273 228 300 11 11 chr2 7007287 7007377 -243680477 - MLT1L LTR MaLR -354 261 172 1861 131 34 14 chr2 7007405 7007696 -243680158 - AluJo SINE Alu -4 308 12 510 295 62 29 chr2 7007836 7008077 -243679777 + MIR SINE MIR 2 250 -12 376 319 223 15 chr2 7008435 7009021 -243678833 + L2 LINE L2 2593 3308 -5 276 335 63 13 chr2 7010155 7010313 -243677541 - MIR SINE MIR -75 187 22 647 143 9 9 chr2 7010448 7010560 -243677294 - AluSg/x SINE Alu -12 300 189 1235 178 36 112 chr2 7011356 7011749 -243676105 + MLT1A1 LTR MaLR 3 365 0 360 229 201 14 chr2 7011882 7012026 -243675828 + MIR SINE MIR 22 192 -70 208 361 0 10 chr2 7015681 7015778 -243672076 + L2 LINE L2 3168 3263 -50 522 284 36 105 chr2 7016035 7016397 -243671457 + MLT1I LTR MaLR 71 407 -2 227 315 120 9 chr2 7016747 7016855 -243670999 - L2 LINE L2 0 3313 3194 632 228 55 22 chr2 7016860 7017042 -243670812 + MER3 DNA MER1_type 1 141 -68 309 281 110 44 chr2 7017280 7017597 -243670257 - L2 LINE L2 -126 3187 2850 25 31 0 0 chr2 7017906 7017938 -243669916 + AT_rich Low_complexity Low_complexity 1 32 0 32 0 0 0 chr2 7018650 7018682 -243669172 + AT_rich Low_complexity Low_complexity 1 32 0 1609 196 7 4 chr2 7018684 7018965 -243668889 - AluJo SINE Alu -30 282 1 305 248 137 0 chr2 7020970 7021087 -243666767 + L2 LINE L2 2060 2192 -1122 839 287 90 61 chr2 7021196 7021240 -243666614 + L2 LINE L2 2575 2616 -697 1032 269 108 70 chr2 7021240 7021767 -243666087 + MLT1H LTR MaLR 1 547 -2 839 287 90 61 chr2 7021767 7022430 -243665424 + L2 LINE L2 2616 3313 0 2163 140 33 36 chr2 7022544 7022908 -243664946 - THE1B LTR MaLR -1 363 1 22 0 0 0 chr2 7023044 7023066 -243664788 + AT_rich Low_complexity Low_complexity 1 22 0 525 324 155 44 chr2 7023358 7024205 -243663649 + L3 LINE CR1 634 1574 -3 495 348 79 12 chr2 7024549 7024802 -243663052 + L3 LINE CR1 364 633 -944 382 279 82 123 chr2 7024961 7025061 -243662793 + L3 LINE CR1 931 1034 -543 2044 126 0 3 chr2 7025061 7025346 -243662508 + AluSc SINE Alu 1 284 -25 315 0 0 0 chr2 7025350 7025385 -243662469 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 382 279 82 123 chr2 7025385 7025620 -243662234 + L3 LINE CR1 1037 1257 -320 266 283 57 9 chr2 7027595 7027701 -243660153 - MIR SINE MIR -47 215 105 429 305 92 17 chr2 7027863 7028037 -243659817 - MIR SINE MIR -28 234 48 271 396 35 30 chr2 7029588 7029757 -243658097 + MIR3 SINE MIR 8 177 -31 248 323 32 0 chr2 7029970 7030063 -243657791 - MIR SINE MIR -76 186 91 230 252 50 59 chr2 7030388 7030507 -243657347 - MIR SINE MIR -29 233 116 328 278 56 76 chr2 7030661 7030963 -243656891 + MLT1I LTR MaLR 97 392 -17 27 22 0 22 chr2 7031190 7031211 -243656643 + AT_rich Low_complexity Low_complexity 1 21 -23 2205 97 7 0 chr2 7031211 7031500 -243656354 - AluSg SINE Alu -19 291 1 27 22 0 22 chr2 7031500 7031523 -243656331 + AT_rich Low_complexity Low_complexity 21 44 0 373 324 9 0 chr2 7032196 7032307 -243655547 + MER81 DNA DNA 3 114 0 364 273 23 0 chr2 7032602 7032690 -243655164 + MER5B DNA MER1_type 17 106 -72 184 308 0 0 chr2 7032747 7032799 -243655055 + MER5B DNA MER1_type 126 177 -1 2677 215 21 57 chr2 7033940 7034567 -243653287 + MER77 LTR ERV1 2 605 0 2130 149 41 3 chr2 7034592 7034934 -243652920 - THE1A LTR MaLR 0 355 1 12009 106 11 0 chr2 7034934 7036496 -243651358 - THE1A-int LTR MaLR 0 1580 1 2423 119 35 6 chr2 7036497 7036841 -243651013 - THE1A LTR MaLR -1 354 1 651 291 29 107 chr2 7037554 7038076 -243649778 + MER34 LTR ERV1 1 481 -61 1371 186 41 11 chr2 7038182 7038451 -243649403 - AluJb SINE Alu -24 288 12 2653 108 6 0 chr2 7038451 7038804 -243649050 - THE1A LTR MaLR 0 355 1 12322 95 10 1 chr2 7038804 7040368 -243647486 - THE1A-int LTR MaLR 0 1580 3 2544 108 35 3 chr2 7040370 7040714 -243647140 - THE1A LTR MaLR 0 355 1 1706 178 3 3 chr2 7041958 7042244 -243645610 - AluJb SINE Alu -11 301 16 198 288 51 0 chr2 7042444 7042503 -243645351 + L2 LINE L2 3252 3313 0 218 377 28 0 chr2 7043182 7043288 -243644566 - L2 LINE L2 -5 3308 3200 249 128 0 0 chr2 7043688 7043735 -243644119 + (TG)n Simple_repeat Simple_repeat 2 48 0 287 319 109 57 chr2 7044085 7044471 -243643383 - L2 LINE L2 -8 3305 2900 21 0 0 0 chr2 7045023 7045044 -243642810 + AT_rich Low_complexity Low_complexity 1 21 0 221 160 0 20 chr2 7045285 7045335 -243642519 + CT-rich Low_complexity Low_complexity 3 51 0 914 280 114 15 chr2 7045392 7046001 -243641853 - L1ME3A LINE L1 -226 5944 5262 2140 131 111 57 chr2 7046077 7046483 -243641371 - MSTA LTR MaLR 0 428 1 1562 226 30 117 chr2 7046870 7047709 -243640145 - L1ME3A LINE L1 -1483 4663 3898 4263 165 20 17 chr2 7047709 7048424 -243639430 + MER50 LTR ERV1 1 717 -17 659 251 53 5 chr2 7048429 7048636 -243639218 - L1ME3A LINE L1 -2254 3892 3676 691 213 38 6 chr2 7048637 7048797 -243639057 - LTR52 LTR ERVL -2 419 255 918 251 109 34 chr2 7048925 7049491 -243638363 - L1ME3A LINE L1 -2468 3678 3070 453 220 159 28 chr2 7050387 7050569 -243637285 - L1M4 LINE L1 -1479 4667 4462 304 302 163 6 chr2 7050680 7050852 -243637002 - L3 LINE CR1 -97 1480 1282 203 217 65 0 chr2 7051515 7051561 -243636293 - MIR SINE MIR -88 174 126 228 319 34 25 chr2 7051806 7051925 -243635929 - MIR SINE MIR -34 228 109 2195 172 40 27 chr2 7051925 7052468 -243635386 + MLT2A2 LTR ERVL 1 554 0 4020 154 53 80 chr2 7052566 7053370 -243634484 - LTR1 LTR ERV1 0 785 3 2145 156 21 32 chr2 7053682 7054061 -243633793 - THE1C LTR MaLR 0 375 1 246 235 73 0 chr2 7055993 7056061 -243631793 + MIR SINE MIR 19 91 -117 2807 95 8 0 chr2 7056136 7056495 -243631359 - THE1B LTR MaLR -2 362 1 1614 114 5 0 chr2 7057444 7057663 -243630191 + AluSq SINE Alu 78 297 -16 734 260 29 19 chr2 7058996 7059204 -243628650 - MER63A DNA MER1_type 0 210 1 387 0 0 0 chr2 7059498 7059541 -243628313 + (CA)n Simple_repeat Simple_repeat 1 43 0 27 29 0 0 chr2 7061682 7061716 -243626138 + AT_rich Low_complexity Low_complexity 1 34 0 2901 198 101 26 chr2 7062174 7062915 -243624939 + MER63D DNA MER1_type 1 797 -264 564 229 0 0 chr2 7062913 7063018 -243624836 + MER63D DNA MER1_type 956 1060 -2 * 213 39 0 0 chr2 7063740 7063766 -243624088 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 182 36 0 36 chr2 7064359 7064387 -243623467 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 198 299 42 49 chr2 7064577 7064721 -243623133 + MIR SINE MIR 20 162 -100 237 257 138 18 chr2 7065963 7066072 -243621782 + L3 LINE CR1 1406 1527 -50 218 235 20 0 chr2 7069035 7069086 -243618768 + CT-rich Low_complexity Low_complexity 3 54 0 363 314 109 46 chr2 7069871 7070009 -243617845 + MIR SINE MIR 7 160 -102 2209 106 27 7 chr2 7070009 7070310 -243617544 + AluSg SINE Alu 1 307 -3 363 314 109 46 chr2 7070310 7070346 -243617508 + MIR SINE MIR 160 192 -70 193 279 63 13 chr2 7070574 7070653 -243617201 + L2 LINE L2 2772 2854 -460 221 351 98 44 chr2 7070722 7070947 -243616907 + L2 LINE L2 3004 3240 -32 2270 121 0 0 chr2 7071016 7071321 -243616533 - AluSg SINE Alu -5 305 1 848 145 0 0 chr2 7071832 7072009 -243615845 + AluSg/x SINE Alu 166 310 0 380 336 23 0 chr2 7072009 7072137 -243615717 - L2 LINE L2 -620 2694 2564 1013 159 25 0 chr2 7072162 7072319 -243615535 - AluSg/x SINE Alu -14 298 138 1793 283 114 34 chr2 7072322 7073236 -243614618 - L2 LINE L2 -773 2541 1555 525 121 0 0 chr2 7073798 7073881 -243613973 + (TTTC)n Simple_repeat Simple_repeat 1 83 0 843 114 13 7 chr2 7073898 7074047 -243613807 + (TTCTC)n Simple_repeat Simple_repeat 5 154 0 1357 160 94 22 chr2 7074049 7074324 -243613530 - AluJo SINE Alu -17 295 1 252 143 45 36 chr2 7074506 7074618 -243613236 + (TA)n Simple_repeat Simple_repeat 1 113 0 252 317 108 17 chr2 7074634 7074754 -243613100 - MIR SINE MIR -112 150 20 26 50 0 0 chr2 7074921 7074961 -243612893 + AT_rich Low_complexity Low_complexity 1 40 0 210 273 0 0 chr2 7075378 7075433 -243612421 + (TA)n Simple_repeat Simple_repeat 2 56 0 1944 131 0 4 chr2 7075592 7075867 -243611987 - AluSx SINE Alu -38 274 1 237 65 0 0 chr2 7076434 7076465 -243611389 + (TG)n Simple_repeat Simple_repeat 2 32 0 251 170 0 0 chr2 7076628 7076675 -243611179 + L1ME LINE L1 98 144 -5926 190 158 0 26 chr2 7077000 7077038 -243610816 + MIR SINE MIR 112 148 -60 279 292 94 74 chr2 7078025 7078227 -243609627 - MIR3 SINE MIR -2 206 1 304 277 56 97 chr2 7078622 7078706 -243609148 - MIR SINE MIR -13 249 163 1572 207 53 68 chr2 7078706 7079102 -243608752 - MLT1B LTR MaLR 0 390 1 304 277 56 97 chr2 7079102 7079212 -243608642 - MIR SINE MIR -99 163 63 287 336 88 13 chr2 7080020 7080246 -243607608 + MIR SINE MIR 10 252 -10 1693 178 0 0 chr2 7080288 7080564 -243607290 + AluJo SINE Alu 31 306 -6 252 289 218 13 chr2 7081170 7081326 -243606528 - MIR SINE MIR -72 190 3 354 306 108 35 chr2 7081334 7081566 -243606288 - MIR SINE MIR 0 262 14 2261 135 42 8 chr2 7081566 7081943 -243605911 - MLT1B LTR MaLR 0 390 1 2170 105 3 22 chr2 7083479 7083794 -243604060 + AluSx SINE Alu 1 309 -3 1125 282 61 16 chr2 7084869 7085434 -243602420 + MER20B DNA MER1_type 10 643 -140 815 174 0 36 chr2 7085452 7085590 -243602264 + FLAM_C SINE Alu 1 133 0 329 321 95 54 chr2 7086072 7086440 -243601414 - L1ME LINE L1 -460 5702 5320 232 281 61 79 chr2 7087735 7087849 -243600005 - L2 LINE L2 -31 3282 3171 409 299 44 0 chr2 7088194 7088331 -243599523 - MIR3 SINE MIR -50 158 16 204 40 0 0 chr2 7088441 7088466 -243599388 + (ATTG)n Simple_repeat Simple_repeat 2 26 0 190 269 128 13 chr2 7088576 7088654 -243599200 + L2 LINE L2 3147 3233 -39 821 277 139 30 chr2 7088770 7089239 -243598615 - LTR33A LTR ERVL 0 523 4 243 330 161 0 chr2 7089991 7090209 -243597645 - MIR SINE MIR -1 261 9 2366 86 201 5 chr2 7090435 7090809 -243597045 - LTR7 LTR ERV1 -3 447 1 360 307 97 38 chr2 7090825 7091063 -243596791 - MIR SINE MIR -9 253 2 219 337 142 30 chr2 7092590 7092759 -243595095 - MIR3 SINE MIR -11 197 10 546 157 9 52 chr2 7093199 7093314 -243594540 - MER3 DNA MER1_type -1 208 99 249 108 0 0 chr2 7093314 7093351 -243594503 + (T)n Simple_repeat Simple_repeat 1 37 0 6465 108 15 14 chr2 7093354 7094818 -243593036 - L1PA15 LINE L1 0 6165 4678 616 184 37 0 chr2 7094818 7094927 -243592927 - MER3 DNA MER1_type -96 113 1 216 331 66 54 chr2 7095099 7095265 -243592589 + L2 LINE L2 3098 3265 -7 1660 166 21 21 chr2 7095527 7095810 -243592044 + MER49 LTR ERV1 3 285 -638 1455 219 20 34 chr2 7095840 7096192 -243591662 + MER4D LTR ERV1 549 895 -8 400 181 52 26 chr2 7096855 7096971 -243590883 - LTR48 LTR ERV1 -48 739 621 1482 131 146 33 chr2 7096998 7097332 -243590522 - LTR49 LTR ERV1 -251 344 1 26 30 0 0 chr2 7097343 7097376 -243590478 + AT_rich Low_complexity Low_complexity 1 33 0 417 20 0 0 chr2 7099351 7099401 -243588453 + (TCTA)n Simple_repeat Simple_repeat 1 50 0 804 240 16 87 chr2 7099495 7099737 -243588117 + AluJo SINE Alu 47 271 -41 664 241 48 28 chr2 7099786 7100083 -243587771 - L1M4 LINE L1 -2797 3349 3042 2544 58 0 0 chr2 7100083 7100391 -243587463 - AluY SINE Alu -3 308 1 664 241 48 28 chr2 7100391 7100445 -243587409 - L1M4 LINE L1 -3104 3042 2991 226 307 107 60 chr2 7100552 7100702 -243587152 + MIR SINE MIR 28 184 -78 385 274 109 57 chr2 7100915 7101145 -243586709 - MIR SINE MIR -9 253 12 265 273 75 68 chr2 7101936 7102097 -243585757 + MIR3 SINE MIR 3 164 -44 2191 109 7 0 chr2 7102553 7102846 -243585008 + AluSx SINE Alu 5 299 -13 1831 189 46 38 chr2 7103419 7103790 -243584064 + MLT1A2 LTR MaLR 1 374 0 3451 118 70 62 chr2 7104226 7104541 -243583313 - LTR29 LTR ERV1 0 622 298 2038 110 69 7 chr2 7104541 7104832 -243583022 - AluSq SINE Alu 0 313 5 3451 118 70 62 chr2 7104832 7105133 -243582721 - LTR29 LTR ERV1 -324 298 1 1643 210 52 9 chr2 7105305 7105653 -243582201 + MLT1A1 LTR MaLR 1 363 -2 664 271 66 6 chr2 7106306 7106472 -243581382 - AluJb SINE Alu 0 312 137 252 337 12 0 chr2 7106780 7106866 -243580988 + MIR SINE MIR 30 116 -92 2386 133 10 41 chr2 7107181 7107594 -243580260 + MER57A LTR ERV1 4 403 0 1863 116 0 8 chr2 7109129 7109387 -243578467 + AluSc SINE Alu 44 299 -10 25 65 0 0 chr2 7109812 7109858 -243577996 + AT_rich Low_complexity Low_complexity 1 46 0 585 237 95 25 chr2 7110045 7110266 -243577588 - L1MC4a LINE L1 -5 7803 6111 649 87 22 0 chr2 7110319 7110411 -243577443 - AluSc SINE Alu -7 302 209 228 35 0 0 chr2 7110443 7110472 -243577382 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 305 123 70 0 chr2 7110472 7110529 -243577325 - AluJ/FRAM SINE Alu -16 286 226 2135 82 7 21 chr2 7110896 7111187 -243576667 - AluSg SINE Alu -23 287 1 21 0 0 0 chr2 7111193 7111214 -243576640 + AT_rich Low_complexity Low_complexity 1 21 0 626 294 70 22 chr2 7111701 7111929 -243575925 - MIR SINE MIR -21 241 3 38 0 0 0 chr2 7112047 7112085 -243575769 + AT_rich Low_complexity Low_complexity 1 38 0 5840 32 5 0 chr2 7112085 7112736 -243575118 - L1PA5 LINE L1 -11 6143 5490 189 338 50 12 chr2 7113002 7113082 -243574772 - L2 LINE L2 -222 3050 2968 843 152 0 8 chr2 7113139 7113271 -243574583 - AluJb SINE Alu -181 131 1 2509 117 29 49 chr2 7113389 7113774 -243574080 + MER51B LTR ERV1 1 377 0 1814 153 28 93 chr2 7113988 7114387 -243573467 - THE1C LTR MaLR -2 373 1 306 164 0 0 chr2 7115145 7115200 -243572654 + T-rich Low_complexity Low_complexity 1 55 0 265 316 175 0 chr2 7115960 7116074 -243571780 + MIR3 SINE MIR 56 189 -19 3275 196 64 3 chr2 7116137 7116825 -243571029 - MER44D DNA MER2_type 0 605 4 1646 179 47 6 chr2 7117783 7118147 -243569707 + MLT1B LTR MaLR 1 379 -11 681 184 40 40 chr2 7118365 7118539 -243569315 + MER5B DNA MER1_type 5 178 0 218 32 32 0 chr2 7120243 7120274 -243567580 + (TG)n Simple_repeat Simple_repeat 2 33 0 226 254 0 0 chr2 7120407 7120462 -243567392 + (TA)n Simple_repeat Simple_repeat 1 55 0 2187 102 30 0 chr2 7120614 7120909 -243566945 + AluSx SINE Alu 1 304 -8 242 341 0 24 chr2 7120938 7121064 -243566790 + MIR SINE MIR 2 122 -86 1592 186 0 28 chr2 7121637 7121927 -243565927 + AluJo SINE Alu 1 282 -30 1265 202 4 0 chr2 7122046 7122279 -243565575 + MER46A DNA MER2_type 3 236 0 371 302 119 13 chr2 7122508 7122667 -243565187 - MIR SINE MIR -77 185 10 396 287 16 23 chr2 7123906 7124035 -243563819 - MIR SINE MIR -107 155 28 234 320 24 40 chr2 7124647 7124772 -243563082 + MIR SINE MIR 22 144 -118 250 322 70 35 chr2 7125084 7125199 -243562655 + MIR SINE MIR 62 180 -82 1211 256 77 35 chr2 7126596 7127131 -243560723 - MER77 LTR ERV1 -4 601 45 380 392 14 5 chr2 7127134 7127351 -243560503 + L2 LINE L2 2579 2797 -517 31 0 0 0 chr2 7127413 7127444 -243560410 + AT_rich Low_complexity Low_complexity 1 31 0 282 317 67 8 chr2 7127668 7127788 -243560066 + MIR SINE MIR 2 128 -134 2416 82 0 22 chr2 7127850 7128166 -243559688 - AluSg SINE Alu -1 309 1 272 338 0 0 chr2 7128194 7128271 -243559583 - L2 LINE L2 -38 3275 3199 190 300 17 17 chr2 7129051 7129111 -243558743 + MIR SINE MIR 8 67 -195 1031 171 17 11 chr2 7129507 7129688 -243558166 + AluJo SINE Alu 99 280 -32 257 0 30 0 chr2 7129863 7129896 -243557958 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 295 65 0 0 chr2 7130317 7130363 -243557491 - MADE1 DNA Mariner -34 46 1 206 338 0 0 chr2 7131426 7131494 -243556360 - L2 LINE L2 -216 3056 2989 260 373 127 19 chr2 7132957 7133169 -243554685 - MIR SINE MIR -8 254 20 184 53 53 26 chr2 7133184 7133222 -243554632 + T-rich Low_complexity Low_complexity 2 40 0 1327 164 52 36 chr2 7133299 7133604 -243554250 + THE1C LTR MaLR 66 375 0 189 415 0 0 chr2 7133667 7133720 -243554134 - L2 LINE L2 -99 3173 3121 280 294 53 29 chr2 7133731 7133901 -243553953 - L2 LINE L2 -1 3312 3139 5089 166 26 8 chr2 7134872 7135037 -243552817 - L1MA10 LINE L1 -1 6333 6172 306 50 0 0 chr2 7135037 7135077 -243552777 + (TG)n Simple_repeat Simple_repeat 2 41 0 5089 166 26 8 chr2 7135077 7135909 -243551945 - L1MA10 LINE L1 -162 6172 5318 1675 182 34 16 chr2 7135966 7136351 -243551503 + L1 LINE L1 4867 5258 -888 204 41 61 61 chr2 7136643 7136692 -243551162 + A-rich Low_complexity Low_complexity 1 49 0 333 241 0 13 chr2 7137868 7137947 -243549907 - MLT1I LTR MaLR -234 175 98 356 280 63 118 chr2 7138816 7139380 -243548474 + L2 LINE L2 2587 3054 -218 316 295 139 16 chr2 7139514 7139636 -243548218 + L2 LINE L2 3136 3272 0 186 43 0 0 chr2 7140454 7140477 -243547377 + (T)n Simple_repeat Simple_repeat 1 23 0 23 0 0 0 chr2 7140834 7140857 -243546997 + AT_rich Low_complexity Low_complexity 1 23 0 1307 177 83 36 chr2 7141283 7141560 -243546294 - AluJo SINE Alu -19 293 4 1606 171 44 83 chr2 7141776 7141916 -243545938 - MER57A LTR ERV1 0 403 259 2336 117 0 0 chr2 7141916 7142224 -243545630 + AluSx SINE Alu 1 308 -4 264 30 0 0 chr2 7142224 7142257 -243545597 + (GA)n Simple_repeat Simple_repeat 2 34 0 1606 171 44 83 chr2 7142257 7142525 -243545329 - MER57A LTR ERV1 -142 261 10 396 321 50 36 chr2 7143589 7143953 -243543901 + L1ME LINE L1 4104 4472 -1674 22 0 0 0 chr2 7144385 7144407 -243543447 + AT_rich Low_complexity Low_complexity 1 22 0 571 216 78 6 chr2 7144440 7144607 -243543247 + MER3 DNA MER1_type 31 209 0 380 277 115 74 chr2 7144689 7144985 -243542869 + L1ME LINE L1 5492 5799 -322 279 185 21 69 chr2 7145128 7145317 -243542537 + (TTATA)n Simple_repeat Simple_repeat 1 180 0 24 0 0 0 chr2 7145798 7145822 -243542032 + AT_rich Low_complexity Low_complexity 1 24 0 764 212 0 0 chr2 7145822 7145954 -243541900 - FLAM_C SINE Alu -1 132 1 305 312 89 51 chr2 7146510 7146667 -243541187 - MIR3 SINE MIR -11 197 35 286 341 24 0 chr2 7147327 7147450 -243540404 + MLT-int LTR MaLR 423 548 -1187 280 218 7 127 chr2 7148059 7148201 -243539653 + MLT1E-int LTR MaLR 1032 1156 -215 226 237 13 40 chr2 7148767 7148781 -243539073 + MLT1G1 LTR MaLR 522 535 -60 2470 107 27 36 chr2 7148781 7149193 -243538661 + L1PA13 LINE L1 5752 6159 -4 226 237 13 40 chr2 7149193 7149254 -243538600 + MLT1G1 LTR MaLR 535 595 0 502 284 75 8 chr2 7149259 7149498 -243538356 + HAL1 LINE L1 1505 1759 -748 772 171 20 0 chr2 7149498 7149650 -243538204 + LTR49 LTR ERV1 1 155 -440 246 283 30 20 chr2 7150572 7150671 -243537183 - L2 LINE L2 -243 3070 2971 260 331 279 3 chr2 7150862 7151149 -243536705 + L2 LINE L2 2371 2736 -578 377 321 165 52 chr2 7151266 7152012 -243535842 - L2 LINE L2 0 3313 2480 379 263 83 3 chr2 7152743 7153054 -243534800 - L1MEc LINE L1 -1599 4616 4244 354 328 29 8 chr2 7153312 7153556 -243534298 - L1MEc LINE L1 -3138 3077 2829 323 329 62 44 chr2 7153665 7153939 -243533915 - L1MEc LINE L1 -3528 2687 2409 1268 288 98 34 chr2 7153988 7154541 -243533313 + MLT1E LTR MaLR 6 593 0 310 280 28 42 chr2 7154541 7154684 -243533170 - L1MEc LINE L1 -4051 2345 2205 337 242 114 15 chr2 7155399 7155531 -243532323 - L1MC5 LINE L1 -35 7926 7782 463 240 7 13 chr2 7156106 7156260 -243531594 - L1MB8 LINE L1 -2 6176 6024 1009 314 92 42 chr2 7156379 7156711 -243531143 - L1M4 LINE L1 -1712 4434 4120 2141 123 48 28 chr2 7156711 7157068 -243530786 - THE1B LTR MaLR 0 364 1 11120 109 4 5 chr2 7157068 7158650 -243529204 - THE1B-int LTR MaLR 0 1580 1 2159 121 51 28 chr2 7158650 7159006 -243528848 - THE1B LTR MaLR 0 364 1 1009 314 92 42 chr2 7159006 7159390 -243528464 - L1M4 LINE L1 -2025 4121 3680 24 0 0 0 chr2 7159676 7159700 -243528154 + AT_rich Low_complexity Low_complexity 1 24 0 228 277 27 45 chr2 7160098 7160210 -243527644 - L1M4 LINE L1 -1907 4239 4130 189 279 82 33 chr2 7160234 7160295 -243527559 - L2 LINE L2 -49 3223 3160 266 320 103 16 chr2 7160346 7160540 -243527314 + L2 LINE L2 3102 3312 -1 405 337 10 10 chr2 7160544 7160743 -243527111 + MER58A DNA MER1_type 4 202 -22 540 85 11 79 chr2 7161823 7162000 -243525854 + (CACAC)n Simple_repeat Simple_repeat 1 165 0 200 136 51 17 chr2 7162003 7162062 -243525792 + (CA)n Simple_repeat Simple_repeat 1 61 0 233 299 21 25 chr2 7162076 7162218 -243525636 + CT-rich Low_complexity Low_complexity 4 236 0 237 306 0 0 chr2 7163215 7163277 -243524577 + C-rich Low_complexity Low_complexity 1 62 0 191 320 100 0 chr2 7163317 7163417 -243524437 + L2 LINE L2 2995 3104 -168 192 250 0 0 chr2 7163471 7163507 -243524347 + L2 LINE L2 3182 3217 -96 270 261 56 72 chr2 7163707 7163887 -243523967 + L2 LINE L2 3117 3293 -20 180 0 0 0 chr2 7163929 7163949 -243523905 + (GAAA)n Simple_repeat Simple_repeat 2 21 0 210 37 0 0 chr2 7164267 7164294 -243523560 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 764 174 114 0 chr2 7164669 7164836 -243523018 - MER5A DNA MER1_type -3 186 1 891 282 32 16 chr2 7165845 7166097 -243521757 + MIR SINE MIR 3 258 -4 299 276 35 43 chr2 7166265 7166381 -243521473 + MIR3 SINE MIR 13 127 -81 307 315 31 39 chr2 7166716 7166843 -243521011 + MIR SINE MIR 17 142 -66 23 33 0 0 chr2 7167969 7167999 -243519855 + AT_rich Low_complexity Low_complexity 1 30 0 2041 129 86 9 chr2 7168426 7168774 -243519080 + THE1C LTR MaLR 1 375 0 221 260 0 0 chr2 7168847 7168897 -243518957 + (TTCA)n Simple_repeat Simple_repeat 1 50 0 451 130 67 27 chr2 7170126 7170599 -243517255 + (TG)n Simple_repeat Simple_repeat 1 491 0 226 113 56 14 chr2 7170611 7170682 -243517172 + (TG)n Simple_repeat Simple_repeat 2 75 0 371 231 56 37 chr2 7170875 7170983 -243516871 - LTR41 LTR ERVL -6 767 658 282 139 0 0 chr2 7171632 7171675 -243516179 - LTR41 LTR ERVL -730 43 1 28 71 0 0 chr2 7171803 7171859 -243515995 + AT_rich Low_complexity Low_complexity 1 56 0 2160 146 47 16 chr2 7172054 7172418 -243515436 + THE1C LTR MaLR 1 375 0 2437 132 0 0 chr2 7172444 7172801 -243515053 + THE1C-int LTR MaLR 15 371 -1209 602 150 71 7 chr2 7172928 7173068 -243514786 + THE1C-int LTR MaLR 1432 1580 0 2015 145 67 20 chr2 7173068 7173426 -243514428 + THE1C LTR MaLR 1 375 0 750 313 55 19 chr2 7173440 7173747 -243514107 + L2 LINE L2 2996 3313 0 1415 226 92 15 chr2 7174235 7174572 -243513282 + MLT1A1 LTR MaLR 3 365 0 494 89 0 111 chr2 7175379 7175469 -243512385 + MADE1 DNA Mariner 1 80 0 387 0 0 0 chr2 7175920 7175963 -243511891 + (CA)n Simple_repeat Simple_repeat 2 44 0 1575 162 19 15 chr2 7177027 7177122 -243510732 + AluSx SINE Alu 40 133 -179 234 0 0 0 chr2 7177122 7177148 -243510706 + (TAA)n Simple_repeat Simple_repeat 2 27 0 1575 162 19 15 chr2 7177148 7177317 -243510537 + AluSx SINE Alu 133 305 -7 894 213 55 8 chr2 7177343 7177578 -243510276 - Zaphod DNA AcHobo -78 3953 3708 2138 172 0 18 chr2 7178356 7178699 -243509155 - MER1B DNA MER1_type 0 337 1 343 232 54 98 chr2 7179008 7179142 -243508712 - L1MC4a LINE L1 -322 5848 5719 188 388 16 16 chr2 7179821 7179942 -243507912 - L2 LINE L2 -4 3309 3189 314 292 60 64 chr2 7180001 7180234 -243507620 - L1M4 LINE L1 -3771 2375 2144 1164 228 49 62 chr2 7180265 7180655 -243507199 - MLT2C1 LTR ERVL -2 395 11 767 287 50 41 chr2 7181224 7181642 -243506212 - HAL1b LINE L1 -704 644 223 2111 115 3 3 chr2 7181647 7181952 -243505902 - AluSq SINE Alu -8 305 1 335 303 42 50 chr2 7183212 7183473 -243504381 + MER112 DNA MER1_type 2 260 0 26 50 0 0 chr2 7183666 7183706 -243504148 + AT_rich Low_complexity Low_complexity 1 40 0 265 283 120 0 chr2 7183755 7183847 -243504007 - MIR SINE MIR -85 123 21 3189 104 26 0 chr2 7184083 7184504 -243503350 - MER57B LTR ERV1 -2 432 1 360 247 0 12 chr2 7185691 7185772 -243502082 + L2 LINE L2 3234 3313 0 2896 135 29 0 chr2 7185913 7186327 -243501527 + MSTA LTR MaLR 2 427 -1 1620 107 21 4 chr2 7186464 7186698 -243501156 - AluSq SINE Alu -10 303 66 43 35 0 0 chr2 7187085 7187142 -243500712 + AT_rich Low_complexity Low_complexity 1 57 0 478 282 139 49 chr2 7187214 7187854 -243500000 - L2 LINE L2 -16 3297 2593 324 70 0 0 chr2 7187872 7187915 -243499939 + (CA)n Simple_repeat Simple_repeat 2 44 0 1097 177 65 140 chr2 7189008 7189393 -243498461 - MLT1B LTR MaLR 0 390 35 2558 94 6 17 chr2 7189394 7189754 -243498100 + L1PB1 LINE L1 5796 6151 0 25 0 0 0 chr2 7190238 7190263 -243497591 + AT_rich Low_complexity Low_complexity 1 25 0 269 298 128 0 chr2 7190327 7190421 -243497433 - L2 LINE L2 -2 3270 3165 2043 141 3 10 chr2 7190583 7190895 -243496959 - AluJb SINE Alu -2 310 1 222 333 39 0 chr2 7191363 7191441 -243496413 + L2 LINE L2 2879 2959 -355 239 308 31 0 chr2 7191611 7191676 -243496178 + L2 LINE L2 3246 3312 -1 449 264 71 65 chr2 7191786 7192168 -243495686 + L1 LINE L1 2648 3031 -3115 335 259 75 91 chr2 7192197 7192746 -243495108 + L1 LINE L1 3256 3789 -2357 2130 128 0 0 chr2 7192746 7193042 -243494812 + AluSg SINE Alu 1 296 -14 335 259 75 91 chr2 7193042 7193231 -243494623 + L1 LINE L1 3789 3979 -2167 228 265 59 0 chr2 7194697 7194765 -243493089 + MIR SINE MIR 106 177 -85 213 318 15 0 chr2 7195065 7195131 -243492723 + L2 LINE L2 3201 3267 -5 1571 161 63 100 chr2 7196448 7196827 -243491027 + MLT1A1 LTR MaLR 1 365 0 309 308 83 6 chr2 7197673 7197842 -243490012 - MIR SINE MIR -11 251 70 960 246 107 49 chr2 7197989 7198420 -243489434 - MLT1C LTR MaLR -3 464 9 22 0 0 0 chr2 7198744 7198766 -243489088 + AT_rich Low_complexity Low_complexity 1 22 0 1093 258 77 67 chr2 7200490 7200926 -243486928 - L1ME2 LINE L1 -208 5956 5504 2039 143 0 10 chr2 7200926 7201233 -243486621 + AluSx SINE Alu 1 304 -8 1093 258 77 67 chr2 7201233 7201477 -243486377 - L1ME2 LINE L1 -660 5504 5264 947 345 112 31 chr2 7201480 7202568 -243485286 + L2 LINE L2 2100 3272 0 206 62 31 0 chr2 7202900 7202932 -243484922 + (TTTTTG)n Simple_repeat Simple_repeat 2 34 0 1836 190 11 17 chr2 7205297 7205655 -243482199 + MLT1A2 LTR MaLR 8 363 -11 216 304 88 35 chr2 7205725 7205896 -243481958 + MER5A DNA MER1_type 4 183 -6 530 283 98 50 chr2 7206037 7206334 -243481520 - MER110 LTR ERV1 -14 477 167 483 250 70 0 chr2 7206417 7206573 -243481281 - MER110A LTR ERV1 -298 170 4 1410 169 51 42 chr2 7207013 7207414 -243480440 - MSTB2 LTR MaLR -2 455 1 225 0 0 0 chr2 7208131 7208156 -243479698 + (T)n Simple_repeat Simple_repeat 1 25 0 281 297 110 35 chr2 7209229 7209278 -243478576 - MIR SINE MIR -59 203 159 1436 231 136 62 chr2 7209278 7209735 -243478119 + MLT2B1 LTR ERVL 1 497 -23 216 0 0 0 chr2 7209735 7209759 -243478095 + (TG)n Simple_repeat Simple_repeat 2 25 0 1436 231 136 62 chr2 7209759 7209785 -243478069 + MLT2B1 LTR ERVL 497 520 0 281 297 110 35 chr2 7209785 7209880 -243477974 - MIR SINE MIR -103 159 48 207 0 0 0 chr2 7210990 7211013 -243476841 + (TTTTG)n Simple_repeat Simple_repeat 1 23 0 207 100 0 0 chr2 7211631 7211661 -243476193 + (A)n Simple_repeat Simple_repeat 1 30 0 349 259 123 24 chr2 7211729 7211899 -243475955 + L1ME LINE L1 5416 5602 -562 2276 78 0 0 chr2 7211932 7212247 -243475607 - AluY SINE Alu 0 315 1 275 239 245 15 chr2 7212294 7212651 -243475203 - MLT1J2 LTR MaLR -4 442 1 3347 104 57 62 chr2 7212863 7213393 -243474461 - MER1A DNA MER1_type 0 527 1 1028 126 0 48 chr2 7213628 7213795 -243474059 - L1PA11 LINE L1 -1 6173 6015 3051 54 3 0 chr2 7213796 7214169 -243473685 + L1PA10 LINE L1 5484 5857 -311 717 251 39 11 chr2 7214320 7214499 -243473355 - MER5A DNA MER1_type -2 187 4 1041 229 4 25 chr2 7214547 7214792 -243473062 - MER63B DNA MER1_type -196 240 1 296 130 74 0 chr2 7215411 7215465 -243472389 + MIR SINE MIR 118 175 -87 355 263 95 37 chr2 7216484 7216674 -243471180 - MIR SINE MIR -42 220 20 792 249 9 33 chr2 7216978 7217191 -243470663 + L1ME1 LINE L1 5954 6161 -5 445 304 73 22 chr2 7217272 7217588 -243470266 - LTR33 LTR ERVL 0 521 190 275 309 120 6 chr2 7217797 7217972 -243469882 - LTR33 LTR ERVL -324 197 3 789 346 26 17 chr2 7218352 7218696 -243469158 + L2 LINE L2 2457 2803 -511 744 178 0 22 chr2 7218697 7218832 -243469022 - FLAM_A SINE Alu -5 137 6 615 236 27 0 chr2 7218893 7219071 -243468783 + L2 LINE L2 2828 3022 -291 348 24 0 0 chr2 7219298 7219339 -243468515 + (TG)n Simple_repeat Simple_repeat 2 42 0 796 189 18 6 chr2 7221776 7221940 -243465914 - LTR64 LTR ERVK -392 166 1 427 312 83 46 chr2 7223038 7223493 -243464361 - L1M4 LINE L1 -2875 3271 2800 823 232 32 48 chr2 7223618 7223868 -243463986 - MLT1E1 LTR MaLR -2 652 407 929 231 46 42 chr2 7223922 7224182 -243463672 - MLT1E1 LTR MaLR -389 265 5 350 223 36 45 chr2 7225511 7225844 -243462010 + L1MDa LINE L1 1125 1484 -5108 491 270 83 78 chr2 7225852 7226200 -243461654 + L1MDa LINE L1 1521 1922 -4777 2634 36 7 0 chr2 7226200 7226501 -243461353 + AluY SINE Alu 1 303 -8 491 270 83 78 chr2 7226501 7226721 -243461133 + L1MDa LINE L1 1922 2139 -4560 1856 270 116 41 chr2 7226754 7227085 -243460769 + L1M4 LINE L1 3587 3892 -2254 954 92 13 7 chr2 7227085 7227238 -243460616 + (GAAA)n Simple_repeat Simple_repeat 4 157 0 1856 270 116 41 chr2 7227238 7228404 -243459450 + L1M4 LINE L1 3892 5195 -951 374 328 47 0 chr2 7229456 7229625 -243458229 + MIR SINE MIR 25 200 -62 765 226 140 82 chr2 7229923 7230360 -243457494 + LTR37B LTR ERV1 7 468 0 2629 52 0 0 chr2 7230536 7230841 -243457013 - AluY SINE Alu -6 305 1 413 291 127 0 chr2 7232341 7232506 -243455348 + MIR SINE MIR 67 252 -10 298 285 176 57 chr2 7234165 7234267 -243453587 - L2 LINE L2 -73 3240 3152 2160 110 0 10 chr2 7234267 7234566 -243453288 + AluSg SINE Alu 9 304 -6 298 285 176 57 chr2 7234566 7234832 -243453022 - L2 LINE L2 -161 3152 2828 1045 293 140 55 chr2 7234966 7235346 -243452508 - L2 LINE L2 -710 2604 2258 1203 149 23 28 chr2 7235346 7235560 -243452294 + L1MC1 LINE L1 6121 6333 0 1045 293 140 55 chr2 7235560 7235930 -243451924 - L2 LINE L2 -1056 2258 1790 309 289 114 0 chr2 7236102 7236216 -243451638 - L2 LINE L2 -723 2591 2465 223 291 0 0 chr2 7236217 7236272 -243451582 - L2 LINE L2 -1529 1785 1731 1415 153 0 0 chr2 7236277 7236499 -243451355 + AluJo SINE Alu 91 312 0 290 274 189 11 chr2 7236508 7236683 -243451171 - L2 LINE L2 -1638 1676 1471 234 219 0 0 chr2 7236729 7236793 -243451061 + (TGGA)n Simple_repeat Simple_repeat 3 66 0 230 335 134 12 chr2 7237516 7237680 -243450174 + MIR SINE MIR 54 237 -25 1677 87 55 0 chr2 7237681 7237899 -243449955 - MER30 DNA MER1_type 0 230 1 420 274 126 49 chr2 7238334 7238659 -243449195 + LTR52 LTR ERVL 2 351 -70 180 0 0 0 chr2 7238771 7238791 -243449063 + (TTAA)n Simple_repeat Simple_repeat 1 20 0 193 365 56 9 chr2 7239031 7239138 -243448716 + L2 LINE L2 3167 3278 -35 198 71 0 0 chr2 7239212 7239240 -243448614 + (TG)n Simple_repeat Simple_repeat 1 28 0 261 0 0 0 chr2 7239294 7239323 -243448531 + (CA)n Simple_repeat Simple_repeat 2 30 0 326 286 0 0 chr2 7239489 7239566 -243448288 + MIR SINE MIR 71 147 -115 496 327 112 11 chr2 7239856 7240125 -243447729 + MLT2F LTR ERVL 269 564 -99 597 276 164 15 chr2 7240684 7241014 -243446840 + MLT2F LTR ERVL 24 402 -261 261 0 0 0 chr2 7242056 7242085 -243445769 + (TG)n Simple_repeat Simple_repeat 2 30 0 692 276 107 31 chr2 7242537 7242846 -243445008 + MLT1C LTR MaLR 3 344 -123 263 293 0 27 chr2 7242846 7242921 -243444933 - L2 LINE L2 -36 3277 3205 207 0 0 0 chr2 7243026 7243049 -243444805 + (TA)n Simple_repeat Simple_repeat 1 23 0 3773 49 0 7 chr2 7244071 7244522 -243443332 - LTR7 LTR ERV1 -2 448 1 2676 75 45 0 chr2 7244522 7244897 -243442957 - HERVH LTR ERV1 0 7713 7322 1337 142 18 9 chr2 7244895 7245113 -243442741 - HERVH LTR ERV1 -1894 5819 5600 * 4134 142 31 2 chr2 7245114 7245757 -243442097 - HERVH LTR ERV1 -2564 5149 4488 3136 125 37 6 chr2 7245759 7246246 -243441608 - HERVH LTR ERV1 -3720 3993 3492 977 120 7 0 chr2 7246236 7246386 -243441468 - HERVH LTR ERV1 -4423 3290 3140 * 16955 101 20 19 chr2 7246380 7248926 -243438928 - HERVH LTR ERV1 -4726 2987 437 991 85 42 78 chr2 7248927 7249182 -243438672 - HERVH LTR ERV1 -7093 620 437 4478 89 5 6 chr2 7249183 7249804 -243438050 - HERVH LTR ERV1 -7093 620 1 3663 55 4 11 chr2 7249806 7250257 -243437597 - LTR7 LTR ERV1 -2 448 1 493 296 90 48 chr2 7250400 7250824 -243437030 + LTR16A LTR ERVL 1 442 -8 267 307 59 52 chr2 7251022 7251175 -243436679 + L2 LINE L2 3160 3313 0 231 253 69 35 chr2 7251955 7252042 -243435812 + MER5A DNA MER1_type 97 186 -3 266 248 90 60 chr2 7253776 7253909 -243433945 + L2 LINE L2 3136 3272 0 213 330 98 0 chr2 7254350 7254462 -243433392 + L3b LINE CR1 1121 1243 -340 506 280 78 56 chr2 7254467 7254570 -243433284 - MIR SINE MIR 0 262 163 1704 197 7 102 chr2 7254570 7255001 -243432853 + MLT1B LTR MaLR 1 390 0 506 280 78 56 chr2 7255001 7255129 -243432725 - MIR SINE MIR -99 163 26 2084 143 74 34 chr2 7255184 7255534 -243432320 + THE1B LTR MaLR 1 364 0 294 235 78 86 chr2 7256132 7256375 -243431479 - L1MC4 LINE L1 -878 7164 6924 468 293 8 0 chr2 7256407 7256540 -243431314 - MER58A DNA MER1_type -44 180 47 423 0 0 0 chr2 7257125 7257172 -243430682 + (TG)n Simple_repeat Simple_repeat 2 48 0 371 356 58 5 chr2 7257246 7257437 -243430417 + MIR SINE MIR 21 221 -41 194 289 44 104 chr2 7257561 7257696 -243430158 - MIR SINE MIR -113 149 23 226 261 171 0 chr2 7258277 7258365 -243429489 + L2 LINE L2 3169 3271 -1 488 43 159 0 chr2 7259779 7259848 -243428006 - MADE1 DNA Mariner 0 80 1 536 220 184 54 chr2 7260043 7260355 -243427499 - MLT1J2 LTR MaLR -10 440 44 377 290 48 0 chr2 7261531 7261655 -243426199 + MER94 DNA DNA 5 134 0 22 0 0 0 chr2 7262055 7262077 -243425777 + AT_rich Low_complexity Low_complexity 1 22 0 233 268 87 22 chr2 7262105 7262288 -243425566 - L1M4 LINE L1 -1006 5140 4946 337 315 124 19 chr2 7262368 7262635 -243425219 - L1M4 LINE L1 -1323 4823 4529 1223 277 36 6 chr2 7262637 7262969 -243424885 + L1M4 LINE L1 1 342 -6200 298 175 186 21 chr2 7262961 7263058 -243424796 + L1M4 LINE L1 1745 1857 -4789 * 483 298 71 60 chr2 7263412 7263975 -243423879 - L1M4 LINE L1 -1922 4224 3656 281 214 0 11 chr2 7264150 7264239 -243423615 + (TA)n Simple_repeat Simple_repeat 1 88 0 389 304 56 60 chr2 7264638 7264673 -243423181 - L1MEd LINE L1 -4949 1170 1136 1955 153 0 10 chr2 7264673 7264980 -243422874 - AluSx SINE Alu -8 304 1 389 304 56 60 chr2 7264980 7265210 -243422644 - L1MEd LINE L1 -4983 1136 906 204 273 0 0 chr2 7265251 7265295 -243422559 + (TA)n Simple_repeat Simple_repeat 2 45 0 3560 139 59 13 chr2 7265295 7265571 -243422283 + MER39B LTR ERV1 3 265 -388 2067 134 80 14 chr2 7265571 7265922 -243421932 + THE1C LTR MaLR 1 374 -1 3560 139 59 13 chr2 7265922 7266240 -243421614 + MER39B LTR ERV1 265 624 -29 2178 73 6 94 chr2 7268153 7268481 -243419373 + AluSx SINE Alu 1 299 -13 187 367 46 0 chr2 7268578 7268687 -243419167 - MIR SINE MIR -32 230 117 468 212 22 4 chr2 7269248 7269484 -243418370 + GA-rich Low_complexity Low_complexity 1 240 0 1851 161 33 3 chr2 7270088 7270213 -243417641 + AluSx SINE Alu 2 122 -190 212 0 36 0 chr2 7270213 7270241 -243417613 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 1851 161 33 3 chr2 7270241 7270414 -243417440 + AluSx SINE Alu 122 309 -3 220 213 43 0 chr2 7271350 7271397 -243416457 - MIR SINE MIR -132 130 82 191 283 22 0 chr2 7271882 7271928 -243415926 - MIR3 SINE MIR -16 192 146 1605 248 102 40 chr2 7272340 7273526 -243414328 + L1ME3A LINE L1 4884 6166 -4 204 40 0 0 chr2 7276179 7276204 -243411650 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 250 245 60 73 chr2 7277167 7277332 -243410522 - MIR3 SINE MIR -11 197 36 288 0 0 0 chr2 7277848 7277880 -243409974 + (T)n Simple_repeat Simple_repeat 1 32 0 470 364 65 14 chr2 7277973 7278190 -243409664 - MIR SINE MIR -15 247 20 352 376 129 0 chr2 7279027 7279237 -243408617 + L2 LINE L2 2488 2724 -590 876 305 57 55 chr2 7279406 7280059 -243407795 + L1MC4a LINE L1 5254 5907 -1901 292 149 15 15 chr2 7280067 7280134 -243407720 + (TA)n Simple_repeat Simple_repeat 2 68 0 306 132 0 0 chr2 7280286 7280339 -243407515 + (TG)n Simple_repeat Simple_repeat 2 54 0 264 326 76 5 chr2 7280350 7280534 -243407320 - L2 LINE L2 -1506 1808 1612 2290 116 129 13 chr2 7280816 7281195 -243406659 - MSTA LTR MaLR -5 423 1 260 239 0 0 chr2 7281283 7281350 -243406504 - HERV16 LTR ERVL -83 4913 4847 360 192 27 0 chr2 7281769 7281842 -243406012 - LTR16B LTR ERVL -389 75 1 4840 221 32 7 chr2 7281985 7282999 -243404855 + MER45B DNA AcHobo 1 1040 0 1967 194 22 8 chr2 7283548 7283908 -243403946 - MLT1A1 LTR MaLR 0 365 1 2317 73 0 0 chr2 7284425 7284765 -243403089 + AluY SINE Alu 1 311 0 2214 139 0 0 chr2 7286277 7286587 -243401267 - AluSx SINE Alu -2 310 1 197 206 48 48 chr2 7286978 7287041 -243400813 + L2 LINE L2 3158 3220 -93 277 301 48 19 chr2 7287141 7287244 -243400610 + L2 LINE L2 3155 3260 -12 609 330 33 0 chr2 7288217 7288432 -243399422 + MIR SINE MIR 20 241 -21 181 337 42 60 chr2 7288511 7288677 -243399177 + MIR3 SINE MIR 37 199 -9 215 59 0 29 chr2 7288994 7289028 -243398826 + (GGGAGA)n Simple_repeat Simple_repeat 4 36 0 1912 208 45 75 chr2 7289088 7289645 -243398209 - MLT1F LTR MaLR -2 540 1 290 269 41 69 chr2 7289723 7289868 -243397986 - L2 LINE L2 -853 2461 2321 1379 316 80 47 chr2 7290126 7290610 -243397244 + L2 LINE L2 2209 2676 -637 2216 90 37 7 chr2 7290610 7290910 -243396944 - AluSg SINE Alu -1 309 1 1379 316 80 47 chr2 7290910 7291488 -243396366 + L2 LINE L2 2676 3313 0 245 252 25 109 chr2 7291825 7291944 -243395910 + L2 LINE L2 3190 3298 -15 319 295 38 0 chr2 7292104 7292209 -243395645 + L1P LINE L1 3656 3764 -2382 203 243 0 0 chr2 7292210 7292247 -243395607 + (CA)n Simple_repeat Simple_repeat 2 38 0 225 236 34 22 chr2 7292254 7292343 -243395511 + L1MC4 LINE L1 6616 6705 -1337 * 237 165 94 47 chr2 7292322 7292407 -243395447 - L1MC4 LINE L1 -1340 6702 6614 380 184 23 0 chr2 7292411 7292498 -243395356 + (CATATA)n Simple_repeat Simple_repeat 6 94 0 761 244 27 44 chr2 7292584 7292872 -243394982 + L1M4 LINE L1 4079 4360 -1786 2878 215 108 82 chr2 7293112 7293623 -243394231 + L1MC3 LINE L1 6593 7089 -696 381 243 0 0 chr2 7293623 7293697 -243394157 + MLT1F1 LTR MaLR 50 123 -444 2878 215 108 82 chr2 7293697 7294260 -243393594 + L1MC3 LINE L1 7089 7770 -15 2035 198 8 6 chr2 7294305 7294669 -243393185 - MLT1A1 LTR MaLR 0 365 1 431 322 63 51 chr2 7294682 7295317 -243392537 + L1MB3 LINE L1 3512 4154 -1992 685 207 95 12 chr2 7295345 7295514 -243392340 + MER5A DNA MER1_type 1 183 -6 361 252 92 30 chr2 7295520 7295651 -243392203 + LTR16A1 LTR ERVL 1 139 -318 843 184 13 0 chr2 7295689 7295841 -243392013 + MER2 DNA MER2_type 17 170 -175 * 965 211 48 55 chr2 7295839 7296128 -243391726 + LTR16A1 LTR ERVL 171 457 0 500 295 49 11 chr2 7296218 7296401 -243391453 - MIR SINE MIR -1 261 72 23 68 0 0 chr2 7296477 7296521 -243391333 + AT_rich Low_complexity Low_complexity 1 44 0 344 279 38 100 chr2 7296894 7297234 -243390620 + MLT1I LTR MaLR 91 409 0 996 234 114 32 chr2 7297361 7297677 -243390177 + MER2 DNA MER2_type 2 343 -2 335 291 57 60 chr2 7297690 7297890 -243389964 + L1MB3 LINE L1 5039 5239 -907 216 111 0 0 chr2 7297890 7297926 -243389928 + (CA)n Simple_repeat Simple_repeat 1 36 0 335 291 57 60 chr2 7297926 7298058 -243389796 + L1MB3 LINE L1 5239 5370 -776 557 282 87 17 chr2 7298228 7298523 -243389331 + L1ME4a LINE L1 5613 5883 -238 428 295 77 22 chr2 7299507 7299690 -243388164 - MIR SINE MIR -58 204 12 186 43 0 0 chr2 7299915 7299938 -243387916 + (TG)n Simple_repeat Simple_repeat 1 23 0 1982 104 33 0 chr2 7300201 7300496 -243387358 + AluSg SINE Alu 1 304 0 239 256 35 47 chr2 7302987 7303073 -243384781 + MIR SINE MIR 137 221 -41 2629 132 5 3 chr2 7303170 7303542 -243384312 + THE1C LTR MaLR 1 373 -2 3500 171 53 0 chr2 7303645 7304271 -243383583 + L1MB3 LINE L1 5523 6181 -2 294 293 0 12 chr2 7305122 7305204 -243382650 + MIR SINE MIR 2 82 -180 2868 152 26 4 chr2 7306387 7306842 -243381012 - L1PA15 LINE L1 0 6165 5701 23 0 0 0 chr2 7308508 7308531 -243379323 + AT_rich Low_complexity Low_complexity 1 23 0 1230 89 157 0 chr2 7309162 7309313 -243378541 + MLT2A1 LTR ERVL 224 412 -32 806 30 10 0 chr2 7309313 7309414 -243378440 + (TCTA)n Simple_repeat Simple_repeat 3 104 0 1230 89 157 0 chr2 7309414 7309453 -243378401 + MLT2A1 LTR ERVL 412 444 0 279 0 0 0 chr2 7309925 7309956 -243377898 + (CAT)n Simple_repeat Simple_repeat 3 33 0 813 290 97 37 chr2 7309989 7310444 -243377410 - MLT1L LTR MaLR -46 569 88 475 204 350 19 chr2 7310888 7311001 -243376853 - MER63A DNA MER1_type -1479 209 135 396 0 0 0 chr2 7311001 7311045 -243376809 + (CA)n Simple_repeat Simple_repeat 2 45 0 475 204 350 19 chr2 7311045 7311088 -243376766 - MER63A DNA MER1_type -1553 135 1 217 368 135 11 chr2 7311281 7311466 -243376388 - L2 LINE L2 -235 3037 2830 1583 212 41 13 chr2 7311622 7312155 -243375699 + MER92B LTR ERV1 15 636 0 368 123 0 15 chr2 7312948 7313013 -243374841 + (TTCC)n Simple_repeat Simple_repeat 3 66 0 412 142 115 108 chr2 7313344 7313492 -243374362 + MER53 DNA DNA 1 149 -40 267 31 0 0 chr2 7313848 7313880 -243373974 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 180 152 0 0 chr2 7316074 7316107 -243371747 + GA-rich Low_complexity Low_complexity 1 33 0 513 323 90 32 chr2 7317082 7317426 -243370428 - L2 LINE L2 -44 3269 2906 257 314 48 40 chr2 7320290 7320414 -243367440 + MIR SINE MIR 20 144 -118 250 339 46 26 chr2 7320970 7321165 -243366689 - L2 LINE L2 -653 2661 2463 901 231 74 0 chr2 7322972 7323214 -243364640 + MIR SINE MIR 1 260 -2 215 266 38 13 chr2 7325819 7325898 -243361956 + MIR SINE MIR 111 191 -71 537 164 116 156 chr2 7327390 7327564 -243360290 + MER20 DNA MER1_type 1 166 -53 285 98 0 0 chr2 7327564 7327605 -243360249 + (CA)n Simple_repeat Simple_repeat 1 41 0 537 164 116 156 chr2 7327605 7327655 -243360199 + MER20 DNA MER1_type 166 216 -3 282 358 5 27 chr2 7327668 7327855 -243359999 + MIR SINE MIR 46 228 -34 203 241 37 0 chr2 7327852 7327906 -243359948 + L2 LINE L2 3211 3266 -6 * 449 205 49 25 chr2 7328685 7328807 -243359047 + L1ME4a LINE L1 5997 6121 0 284 289 31 21 chr2 7329254 7329351 -243358503 + MIR SINE MIR 44 141 -67 2208 114 0 22 chr2 7331862 7332179 -243355675 + AluSg SINE Alu 1 310 0 199 380 53 9 chr2 7333075 7333188 -243354666 + MIR SINE MIR 36 153 -109 21 0 0 0 chr2 7334315 7334336 -243353518 + AT_rich Low_complexity Low_complexity 1 21 0 2201 135 112 0 chr2 7334934 7335319 -243352535 - MSTA LTR MaLR 0 428 1 213 302 0 0 chr2 7335439 7335492 -243352362 - MIR SINE MIR -163 99 47 218 220 9 147 chr2 7336824 7336884 -243350970 + MER5A DNA MER1_type 16 56 -133 2134 133 0 0 chr2 7336884 7337192 -243350662 + AluSx SINE Alu 3 310 -2 218 220 9 147 chr2 7337192 7337240 -243350614 + MER5A DNA MER1_type 56 109 -80 619 185 106 7 chr2 7337247 7337398 -243350456 - MER5B DNA MER1_type -12 166 1 327 265 68 0 chr2 7337552 7337684 -243350170 + MIR SINE MIR 60 200 -62 1594 158 105 31 chr2 7339044 7339367 -243348487 + MER7A DNA MER2_type 2 346 0 501 271 52 35 chr2 7339828 7340057 -243347797 - LTR67 LTR ERVL 0 557 325 280 379 26 13 chr2 7340653 7340806 -243347048 - MIR3 SINE MIR -38 170 16 748 212 67 56 chr2 7342722 7343049 -243344805 - LTR37B LTR ERV1 -7 461 91 22 0 0 0 chr2 7343639 7343661 -243344193 + AT_rich Low_complexity Low_complexity 1 22 0 1893 110 77 44 chr2 7343711 7344074 -243343780 + THE1C LTR MaLR 1 375 0 261 83 0 0 chr2 7345806 7345842 -243342012 + (CA)n Simple_repeat Simple_repeat 1 36 0 198 340 21 11 chr2 7346811 7346905 -243340949 + MIR SINE MIR 60 154 -108 1104 238 79 0 chr2 7348575 7348840 -243339014 - MER58B DNA MER1_type 0 341 56 232 213 13 27 chr2 7349003 7349078 -243338776 + (TGAA)n Simple_repeat Simple_repeat 1 74 0 208 341 145 15 chr2 7350578 7350776 -243337078 + MIR3 SINE MIR 21 241 -21 1201 118 82 282 chr2 7350776 7351311 -243336543 - MSTA LTR MaLR 0 428 1 4172 146 50 21 chr2 7351499 7352262 -243335592 + LTR1 LTR ERV1 1 785 0 247 361 62 0 chr2 7352964 7353094 -243334760 - MIR SINE MIR -105 157 20 3528 176 30 11 chr2 7353095 7353849 -243334005 + L1MA9 LINE L1 4242 5010 -1136 5163 190 18 9 chr2 7354089 7354863 -243332991 + L1MA9 LINE L1 5002 5768 -544 222 37 0 0 chr2 7354863 7354890 -243332964 + (CA)n Simple_repeat Simple_repeat 2 28 0 5163 190 18 9 chr2 7354890 7355153 -243332701 + L1MA9 LINE L1 5768 6027 -285 1480 196 28 39 chr2 7355153 7355489 -243332365 + AluJo SINE Alu 1 333 0 5163 190 18 9 chr2 7355489 7355749 -243332105 + L1MA9 LINE L1 6027 6311 -1 204 325 165 21 chr2 7356345 7356733 -243331121 + L2 LINE L2 2454 2897 -417 254 265 29 0 chr2 7356733 7356801 -243331053 + CT-rich Low_complexity Low_complexity 2 71 0 190 357 56 32 chr2 7356832 7357081 -243330773 + L2 LINE L2 2945 3199 -73 315 294 43 37 chr2 7357271 7357434 -243330420 + MIR SINE MIR 35 198 -64 1673 190 73 38 chr2 7357784 7358163 -243329691 - MLT1C LTR MaLR 0 467 72 1320 219 76 28 chr2 7358163 7358520 -243329334 + MLT1A2 LTR MaLR 1 374 0 1673 190 73 38 chr2 7358520 7358535 -243329319 - MLT1C LTR MaLR -395 72 59 3575 70 4 7 chr2 7358542 7358996 -243328858 + MLT2A2 LTR ERVL 1 453 0 192 296 0 0 chr2 7360061 7360115 -243327739 - L2 LINE L2 0 3272 3219 365 265 11 99 chr2 7360182 7360363 -243327491 + MIR SINE MIR 62 226 -36 290 68 0 23 chr2 7360466 7360510 -243327344 - MADE1 DNA Mariner -37 43 1 198 0 0 0 chr2 7361014 7361036 -243326818 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 232 326 32 0 chr2 7361772 7361867 -243325987 + MIR SINE MIR 43 140 -68 221 281 37 49 chr2 7363984 7364066 -243323788 - L2 LINE L2 0 3272 3192 505 299 23 37 chr2 7364733 7364976 -243322878 + MIR SINE MIR 18 253 -9 1214 254 100 33 chr2 7365231 7365697 -243322157 - MER21B LTR ERV1 -97 834 294 374 212 0 0 chr2 7365770 7365836 -243322018 - MER21B LTR ERV1 -785 78 13 277 284 110 19 chr2 7368119 7368274 -243319580 - MLT1L LTR MaLR -10 605 437 457 286 58 15 chr2 7368649 7368862 -243318992 - MIR SINE MIR -22 240 18 219 333 108 8 chr2 7369052 7369172 -243318682 - MIR3 SINE MIR -21 187 56 2506 57 3 0 chr2 7369229 7369527 -243318327 + AluY SINE Alu 1 299 -12 235 301 115 9 chr2 7369802 7369915 -243317939 + MIR SINE MIR 88 212 -50 270 316 54 65 chr2 7370623 7370791 -243317063 + MIR3 SINE MIR 16 181 -27 1169 42 0 0 chr2 7370792 7370934 -243316920 + L1PA5 LINE L1 6013 6154 0 318 282 0 0 chr2 7371553 7371695 -243316159 + (CA)n Simple_repeat Simple_repeat 2 143 0 413 282 30 39 chr2 7372557 7372716 -243315138 - MIR SINE MIR -63 145 23 1426 212 43 54 chr2 7373051 7373219 -243314635 + MLT1A2 LTR MaLR 1 169 -205 2037 125 7 0 chr2 7373219 7373523 -243314331 + AluSq SINE Alu 1 306 -7 1426 212 43 54 chr2 7373523 7373726 -243314128 + MLT1A2 LTR MaLR 169 368 -6 275 247 26 39 chr2 7373860 7373937 -243313917 - MER58B DNA MER1_type 0 341 266 255 314 120 31 chr2 7374573 7374764 -243313090 - MIR SINE MIR -6 256 49 213 132 0 0 chr2 7375338 7375376 -243312478 + (CA)n Simple_repeat Simple_repeat 2 39 0 243 300 273 7 chr2 7376257 7376407 -243311447 - MIR SINE MIR -41 221 32 1309 166 12 104 chr2 7376513 7376695 -243311159 - AluJo SINE Alu -2 310 113 243 0 0 0 chr2 7376695 7376722 -243311132 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2692 16 0 0 chr2 7376724 7377030 -243310824 - AluYb8 SINE Alu -12 306 1 1309 166 12 104 chr2 7377030 7377181 -243310673 - AluJo SINE Alu -200 112 5 37 62 0 0 chr2 7377530 7377595 -243310259 + AT_rich Low_complexity Low_complexity 1 65 0 320 230 0 10 chr2 7377896 7377996 -243309858 + CT-rich Low_complexity Low_complexity 2 100 0 1495 217 40 40 chr2 7378249 7378623 -243309231 + MLT1A2 LTR MaLR 1 374 0 696 342 44 44 chr2 7378689 7379125 -243308729 + L2 LINE L2 2836 3271 -1 759 244 72 29 chr2 7379156 7379687 -243308167 - MLT1E1 LTR MaLR -2 652 1 334 353 30 18 chr2 7379772 7379939 -243307915 + MIR SINE MIR 65 233 -29 183 42 0 0 chr2 7380138 7380162 -243307692 + (A)n Simple_repeat Simple_repeat 1 24 0 1052 248 9 0 chr2 7381536 7381758 -243306096 - MLT1A1 LTR MaLR 0 365 142 1230 203 130 20 chr2 7382561 7382906 -243304948 - MLT1B LTR MaLR -4 386 4 333 321 125 22 chr2 7383523 7383747 -243304107 + LTR16A LTR ERVL 115 361 -89 952 330 54 39 chr2 7384635 7385207 -243302647 + HERV16 LTR ERVL 991 1571 -3425 1028 291 44 47 chr2 7385396 7386245 -243301609 + L1M4 LINE L1 2131 2976 -3170 1171 89 0 56 chr2 7386280 7386438 -243301416 - L1PB1 LINE L1 -207 5944 5796 207 0 0 0 chr2 7386438 7386461 -243301393 + (CA)n Simple_repeat Simple_repeat 2 24 0 1171 89 0 56 chr2 7386461 7386481 -243301373 - L1PB1 LINE L1 -355 5796 5776 393 107 47 33 chr2 7386494 7386644 -243301210 + (TA)n Simple_repeat Simple_repeat 1 152 0 253 57 23 68 chr2 7386679 7386767 -243301087 + (TA)n Simple_repeat Simple_repeat 2 85 0 2047 88 35 0 chr2 7386771 7387056 -243300798 - L1PB1 LINE L1 -360 5791 5497 380 349 50 43 chr2 7387129 7387387 -243300467 + L2 LINE L2 3005 3264 -8 412 274 11 86 chr2 7388009 7388184 -243299670 - MIR3 SINE MIR -27 181 20 204 40 0 0 chr2 7388762 7388787 -243299067 + (TGGA)n Simple_repeat Simple_repeat 2 26 0 278 358 50 11 chr2 7389853 7390032 -243297822 + MIR3 SINE MIR 14 199 -9 510 203 0 0 chr2 7390917 7391035 -243296819 + (TG)n Simple_repeat Simple_repeat 1 118 0 548 302 131 34 chr2 7392186 7392454 -243295400 - MER115 DNA AcHobo -398 295 2 228 182 0 0 chr2 7393844 7393888 -243293966 + MIR SINE MIR 84 127 -135 2266 114 76 15 chr2 7394330 7394673 -243293181 + THE1B LTR MaLR 1 364 0 258 95 0 0 chr2 7395094 7395136 -243292718 + (TG)n Simple_repeat Simple_repeat 2 43 0 235 316 68 34 chr2 7396203 7396380 -243291474 - MIR SINE MIR -77 185 3 466 257 56 78 chr2 7398643 7399111 -243288743 + MLT1F1 LTR MaLR 17 537 -5 231 317 39 65 chr2 7401125 7401299 -243286555 + MIR SINE MIR 5 171 -62 184 293 35 0 chr2 7401961 7402019 -243285835 - L2 LINE L2 -18 3254 3195 672 295 78 4 chr2 7402781 7403025 -243284829 - MLT1C LTR MaLR -2 465 204 1398 141 90 31 chr2 7403513 7403618 -243284236 + AluSp SINE Alu 10 107 -206 2145 88 3 26 chr2 7403618 7403923 -243283931 + AluY SINE Alu 1 298 -13 1398 141 90 31 chr2 7403923 7404073 -243283781 + AluSp SINE Alu 107 280 -33 22 0 0 0 chr2 7404093 7404115 -243283739 + AT_rich Low_complexity Low_complexity 1 22 0 410 318 218 45 chr2 7404425 7404938 -243282916 + L1MC4a LINE L1 5255 5856 -1952 557 365 44 6 chr2 7404963 7405284 -243282570 - MLT1J1 LTR MaLR -43 403 71 396 141 125 0 chr2 7405861 7405925 -243281929 - FRAM/FAM SINE Alu -95 71 1 509 225 73 22 chr2 7406389 7406533 -243281321 - MLT1J2 LTR MaLR -289 161 18 200 173 39 58 chr2 7406656 7406708 -243281146 + GA-rich Low_complexity Low_complexity 4 54 0 248 130 22 0 chr2 7407037 7407083 -243280771 + (TTCA)n Simple_repeat Simple_repeat 4 50 0 2411 120 40 0 chr2 7408305 7408654 -243279200 - THE1B LTR MaLR -1 363 1 251 298 28 61 chr2 7408868 7409044 -243278810 + MIR SINE MIR 34 206 -2 33 56 0 0 chr2 7409053 7409107 -243278747 + AT_rich Low_complexity Low_complexity 1 54 0 248 270 50 20 chr2 7409229 7409329 -243278525 + MIR SINE MIR 18 120 -142 226 260 30 80 chr2 7409333 7409433 -243278421 + MIR SINE MIR 89 183 -79 239 294 198 23 chr2 7411809 7411986 -243275868 - L2 LINE L2 -4 3309 3102 3698 30 0 0 chr2 7412158 7412588 -243275266 - L1PA2 LINE L1 0 6155 5726 4184 11 0 0 chr2 7412588 7413089 -243274765 + L1PA2 LINE L1 5221 5721 -434 350 161 23 35 chr2 7413318 7413405 -243274449 + L1MEc LINE L1 2232 2317 -4079 360 282 15 8 chr2 7413476 7413607 -243274247 + L1MCc LINE L1 27 158 -6265 308 294 147 49 chr2 7413708 7413973 -243273881 + L1MCc LINE L1 298 588 -5835 403 195 25 93 chr2 7414099 7414217 -243273637 + L1MCc LINE L1 818 927 -5496 1477 231 46 3 chr2 7414917 7415246 -243272608 + MLT1A1 LTR MaLR 1 343 -22 250 184 41 0 chr2 7415246 7415295 -243272559 + MLT1A1 LTR MaLR 315 365 0 190 292 22 56 chr2 7415844 7415933 -243271921 + MIR3 SINE MIR 89 174 -34 1095 332 125 29 chr2 7415936 7417253 -243270601 + L2 LINE L2 1830 3272 0 335 326 88 21 chr2 7417294 7417487 -243270367 + MIR3 SINE MIR 2 207 -1 1047 166 42 0 chr2 7417919 7418112 -243269742 + MER3 DNA MER1_type 9 209 0 2202 160 35 38 chr2 7418711 7419257 -243268597 + MLT2A2 LTR ERVL 1 551 -3 414 0 0 0 chr2 7419257 7419303 -243268551 + (CA)n Simple_repeat Simple_repeat 2 47 0 249 159 0 0 chr2 7421475 7421519 -243266335 + (TA)n Simple_repeat Simple_repeat 1 44 0 204 135 0 0 chr2 7421518 7421555 -243266299 + (CA)n Simple_repeat Simple_repeat 2 38 0 * 531 252 38 26 chr2 7421560 7421787 -243266067 - L1MD3 LINE L1 -1359 6683 6443 1121 123 0 0 chr2 7421868 7422030 -243265824 + MLT2B2 LTR ERVL 2 163 -352 2088 140 143 11 chr2 7422176 7422554 -243265300 + MSTA LTR MaLR 1 428 0 27 81 0 0 chr2 7422805 7422867 -243264987 + AT_rich Low_complexity Low_complexity 1 62 0 2936 194 22 2 chr2 7423339 7423849 -243264005 - MLT2B1 LTR ERVL 0 520 1 1574 243 102 49 chr2 7423945 7424533 -243263321 + L1MC4 LINE L1 6468 7086 -956 1106 280 98 22 chr2 7424664 7425071 -243262783 + L1MC4 LINE L1 7464 7901 -141 230 216 0 0 chr2 7425075 7425126 -243262728 + L1MC4 LINE L1 7990 8040 -2 2236 105 6 10 chr2 7427004 7427317 -243260537 + AluSx SINE Alu 1 312 0 4195 195 20 5 chr2 7427456 7429009 -243258845 - L1MA9 LINE L1 -14 6298 4536 287 220 0 0 chr2 7429021 7429080 -243258774 - L1MA9 LINE L1 -2494 3652 3594 1364 248 28 55 chr2 7429246 7429645 -243258209 - MLT1E LTR MaLR 0 593 206 216 111 0 0 chr2 7429674 7429710 -243258144 + (TG)n Simple_repeat Simple_repeat 2 37 0 239 213 0 0 chr2 7429710 7429757 -243258097 - MLT1E LTR MaLR -491 163 117 340 239 0 54 chr2 7430343 7430435 -243257419 + L2 LINE L2 3186 3272 0 235 291 0 0 chr2 7431101 7431156 -243256698 + CT-rich Low_complexity Low_complexity 2 56 0 382 296 113 31 chr2 7431222 7431381 -243256473 + MIR3 SINE MIR 5 176 -32 361 299 54 65 chr2 7432137 7432321 -243255533 - MIR SINE MIR -56 206 25 1569 233 55 17 chr2 7432767 7433187 -243254667 + MER63B DNA MER1_type 1 436 0 2224 273 137 30 chr2 7433934 7434931 -243252923 - HAL1 LINE L1 -7 2500 1397 197 267 0 0 chr2 7435040 7435085 -243252769 + MIR SINE MIR 107 151 -111 369 183 0 0 chr2 7435223 7435294 -243252560 - AluJ/FRAM SINE Alu 0 302 232 2410 308 67 25 chr2 7435314 7435936 -243251918 - HAL1 LINE L1 -1189 1318 724 2363 127 36 28 chr2 7435936 7436297 -243251557 - THE1B LTR MaLR 0 364 1 2410 308 67 25 chr2 7436297 7436937 -243250917 - HAL1 LINE L1 -1783 724 3 1648 200 7 0 chr2 7437189 7437499 -243250355 + AluJo SINE Alu 1 312 0 2219 104 0 20 chr2 7437558 7437857 -243249997 + AluSc SINE Alu 1 293 -16 216 0 0 0 chr2 7437951 7437975 -243249879 + (CAAAAA)n Simple_repeat Simple_repeat 3 26 0 1252 188 31 100 chr2 7438437 7438593 -243249261 + MLT1B LTR MaLR 21 186 -204 1916 133 20 20 chr2 7438593 7438894 -243248960 + AluSg SINE Alu 1 301 -9 1252 188 31 100 chr2 7438894 7439126 -243248728 + MLT1B LTR MaLR 186 382 -8 549 278 80 6 chr2 7440137 7440313 -243247541 + Charlie1 DNA MER1_type 1 189 -2572 2203 93 33 0 chr2 7440375 7440676 -243247178 + AluY SINE Alu 1 311 0 249 98 0 157 chr2 7440676 7440727 -243247127 - U6 snRNA snRNA -1 106 64 473 278 15 0 chr2 7440727 7440860 -243246994 + Charlie1 DNA MER1_type 2626 2760 -1 21 36 0 0 chr2 7441406 7441434 -243246420 + AT_rich Low_complexity Low_complexity 1 28 0 1535 184 0 21 chr2 7441548 7441831 -243246023 - AluJo SINE Alu -33 279 3 21 0 0 0 chr2 7442182 7442203 -243245651 + AT_rich Low_complexity Low_complexity 1 21 0 305 216 53 88 chr2 7442405 7442576 -243245278 + L1ME4a LINE L1 5260 5424 -2384 311 288 194 0 chr2 7442792 7442931 -243244923 + MIR SINE MIR 84 249 -13 342 0 0 0 chr2 7442948 7442986 -243244868 + (TG)n Simple_repeat Simple_repeat 1 38 0 261 0 0 0 chr2 7442985 7443014 -243244840 + (GA)n Simple_repeat Simple_repeat 1 29 0 * 1956 118 0 15 chr2 7443019 7443291 -243244563 - AluSx SINE Alu -44 268 1 228 67 0 0 chr2 7444707 7444737 -243243117 + (T)n Simple_repeat Simple_repeat 1 30 0 694 263 99 65 chr2 7445841 7446396 -243241458 + L1ME4a LINE L1 5524 6097 -24 2203 101 3 10 chr2 7446671 7446969 -243240885 + AluSx SINE Alu 1 296 -16 1741 169 3 3 chr2 7447293 7447583 -243240271 + AluJb SINE Alu 7 296 -16 2503 131 28 17 chr2 7448286 7448646 -243239208 - THE1B LTR MaLR 0 364 1 2576 47 3 31 chr2 7448761 7449079 -243238775 - AluY SINE Alu -2 309 1 626 266 7 26 chr2 7449212 7449366 -243238488 + MER45A DNA AcHobo 3 153 -25 1653 262 43 15 chr2 7450790 7451404 -243236450 - L1MD3 LINE L1 -10 7985 7258 256 50 75 0 chr2 7451411 7451451 -243236403 - L1MA2 LINE L1 0 6304 6262 314 105 88 0 chr2 7451453 7451510 -243236344 + L1MA2 LINE L1 6225 6286 -18 755 284 74 40 chr2 7451539 7451995 -243235859 - L1ME1 LINE L1 -264 5902 5407 364 298 34 58 chr2 7452698 7452906 -243234948 + MIR SINE MIR 59 261 -1 2099 66 7 42 chr2 7452938 7453224 -243234630 + AluSp SINE Alu 1 276 -37 321 339 54 0 chr2 7453410 7453540 -243234314 + L2 LINE L2 3133 3269 -3 199 269 19 0 chr2 7455386 7455438 -243232416 + L2 LINE L2 3242 3294 -19 235 349 42 12 chr2 7455475 7455641 -243232213 - MIR SINE MIR -4 258 88 297 0 0 0 chr2 7455682 7455715 -243232139 + (CA)n Simple_repeat Simple_repeat 2 34 0 2228 114 3 0 chr2 7455794 7456091 -243231763 - AluSx SINE Alu -14 298 1 182 312 101 43 chr2 7456330 7456468 -243231386 - L2 LINE L2 0 3272 3127 3755 160 13 61 chr2 7456601 7457016 -243230838 - L1MA10 LINE L1 -3 6331 5967 1846 177 0 16 chr2 7457016 7457333 -243230521 - AluJb SINE Alu 0 312 1 3755 160 13 61 chr2 7457333 7457673 -243230181 - L1MA10 LINE L1 -367 5967 5612 310 121 30 0 chr2 7458320 7458386 -243229468 + CT-rich Low_complexity Low_complexity 2 69 0 378 42 0 0 chr2 7458388 7458436 -243229418 + (CA)n Simple_repeat Simple_repeat 1 48 0 250 270 176 0 chr2 7461531 7461605 -243226249 + L2 LINE L2 3186 3272 0 254 296 12 0 chr2 7461605 7461686 -243226168 + (TGAA)n Simple_repeat Simple_repeat 2 83 0 624 328 129 13 chr2 7461749 7462353 -243225501 + L2 LINE L2 2141 2814 -500 285 284 119 34 chr2 7462425 7462601 -243225253 + L2 LINE L2 2890 3080 -192 514 106 0 32 chr2 7463272 7463288 -243224566 + (GAAA)n Simple_repeat Simple_repeat 2 17 -75 1132 189 242 4 chr2 7463288 7463532 -243224322 + AluJb SINE Alu 1 302 0 514 106 0 32 chr2 7463532 7463609 -243224245 + (GAAA)n Simple_repeat Simple_repeat 17 92 0 281 328 53 8 chr2 7463891 7464022 -243223832 - MIR3 SINE MIR -61 147 11 2212 105 0 16 chr2 7464204 7464508 -243223346 - AluSx SINE Alu -13 299 1 675 234 34 34 chr2 7464963 7465170 -243222684 + L1ME LINE L1 5516 5719 -402 227 57 29 0 chr2 7465430 7465465 -243222389 + L1ME4a LINE L1 6085 6120 -1 198 304 76 13 chr2 7466522 7466601 -243221253 - MER5A DNA MER1_type -51 138 55 1258 316 113 14 chr2 7466777 7467432 -243220422 + L3 LINE CR1 615 1334 -243 216 328 59 51 chr2 7467479 7467735 -243220119 + L2 LINE L2 2844 3101 -171 215 204 0 0 chr2 7467855 7467899 -243219955 + GA-rich Low_complexity Low_complexity 1 44 0 3816 185 36 30 chr2 7468633 7469476 -243218378 + L1MB7 LINE L1 5337 6184 0 298 336 22 52 chr2 7471356 7471490 -243216364 - L2 LINE L2 -4 3268 3139 362 271 114 43 chr2 7472002 7472283 -243215571 - L1M4 LINE L1 -1771 4375 4075 24 53 0 0 chr2 7472651 7472689 -243215165 + AT_rich Low_complexity Low_complexity 1 38 0 191 416 112 0 chr2 7472695 7472820 -243215034 + L2 LINE L2 3134 3272 0 2644 197 18 9 chr2 7475540 7476089 -243211765 + MER89 LTR ERV1 4 557 -2 245 297 27 0 chr2 7476971 7477045 -243210809 + CT-rich Low_complexity Low_complexity 1 76 0 502 277 15 8 chr2 7477439 7477569 -243210285 + MER94 DNA DNA 3 133 -1 4119 112 30 11 chr2 7478398 7479021 -243208833 + MER41B LTR ERV1 1 635 0 2978 215 88 110 chr2 7479959 7481213 -243206641 + MER69B DNA AcHobo 1 1226 0 687 251 52 11 chr2 7481827 7482018 -243205836 - MLT2B1 LTR ERVL -3 517 319 1796 202 17 17 chr2 7482036 7482397 -243205457 + MLT1A2 LTR MaLR 14 374 0 1283 212 7 15 chr2 7482467 7482736 -243205118 - MLT2B1 LTR ERVL -253 267 1 1640 209 33 22 chr2 7482970 7483338 -243204516 - MLT1A2 LTR MaLR 0 374 3 13669 139 36 46 chr2 7483551 7485859 -243201995 + Tigger1 DNA MER2_type 14 2297 -121 1910 115 70 0 chr2 7485859 7486129 -243201725 + AluSx SINE Alu 9 297 -15 13669 139 36 46 chr2 7486129 7486250 -243201604 + Tigger1 DNA MER2_type 2297 2418 0 196 284 75 0 chr2 7486658 7486725 -243201129 + MIR3 SINE MIR 114 185 -23 186 380 70 6 chr2 7488087 7488258 -243199596 - MIR SINE MIR -80 182 1 2065 92 4 0 chr2 7488540 7488801 -243199053 + AluSq SINE Alu 36 297 -16 194 62 31 0 chr2 7489026 7489058 -243198796 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 309 174 0 0 chr2 7490211 7490280 -243197574 + (TAGA)n Simple_repeat Simple_repeat 1 69 0 208 298 83 24 chr2 7490299 7490383 -243197471 - MIR SINE MIR -70 192 104 333 322 65 37 chr2 7494455 7494669 -243193185 - MIR SINE MIR -11 251 32 2910 19 0 0 chr2 7495284 7495601 -243192253 - AluYb8 SINE Alu -1 317 1 530 223 30 81 chr2 7495650 7495786 -243192068 - MER112 DNA MER1_type -7 253 128 885 241 39 0 chr2 7495786 7495993 -243191861 + MER20 DNA MER1_type 4 218 -1 530 223 30 81 chr2 7495993 7496053 -243191801 - MER112 DNA MER1_type -132 128 67 228 35 0 0 chr2 7496173 7496202 -243191652 + (CA)n Simple_repeat Simple_repeat 2 30 0 249 213 0 80 chr2 7496538 7496613 -243191241 - MIR SINE MIR -78 184 116 303 244 24 0 chr2 7497836 7497918 -243189936 + L2 LINE L2 3133 3216 -56 209 195 0 0 chr2 7498004 7498045 -243189809 + L2 LINE L2 3265 3305 -8 229 169 28 84 chr2 7498098 7498169 -243189685 + L2 LINE L2 3201 3267 -5 32499 31 4 0 chr2 7498706 7503319 -243184535 + L1PA3 LINE L1 1527 6155 0 472 147 13 0 chr2 7503571 7503646 -243184208 - MER58 DNA MER1_type 0 2420 2345 259 175 18 53 chr2 7503674 7503731 -243184123 - MER58 DNA MER1_type -157 58 4 218 288 0 0 chr2 7504270 7504329 -243183525 + MIR SINE MIR 71 129 -133 21 0 0 0 chr2 7505151 7505172 -243182682 + AT_rich Low_complexity Low_complexity 1 21 0 183 271 35 35 chr2 7505177 7505262 -243182592 - MIR SINE MIR -102 160 76 294 29 0 0 chr2 7505462 7505497 -243182357 + (CA)n Simple_repeat Simple_repeat 2 36 0 22 0 0 0 chr2 7506762 7506784 -243181070 + AT_rich Low_complexity Low_complexity 1 22 0 1673 167 27 27 chr2 7507487 7507787 -243180067 + AluJo SINE Alu 1 300 -12 380 301 92 10 chr2 7508111 7508307 -243179547 + MIR SINE MIR 13 224 -38 449 283 7 0 chr2 7508395 7508540 -243179314 - MER117 DNA MER1_type -47 150 5 410 286 8 0 chr2 7509402 7509521 -243178333 + MIR SINE MIR 114 233 -29 1403 137 24 9 chr2 7509892 7510319 -243177535 + LTR54 LTR ERV1 2 510 0 397 175 19 0 chr2 7510322 7510425 -243177429 + (CA)n Simple_repeat Simple_repeat 2 106 0 662 277 59 4 chr2 7510966 7511204 -243176650 + MIR SINE MIR 3 253 -9 1079 137 0 120 chr2 7511278 7511512 -243176342 + L1MB5 LINE L1 5963 6168 -6 185 196 20 0 chr2 7511515 7511566 -243176288 + GA-rich Low_complexity Low_complexity 1 52 0 214 279 0 15 chr2 7512141 7512209 -243175645 + A-rich Low_complexity Low_complexity 2 68 0 226 205 72 48 chr2 7513929 7514012 -243173842 - L3 LINE CR1 -1 1576 1492 182 332 45 65 chr2 7514526 7514725 -243173129 - L2 LINE L2 -18 3254 3060 2096 128 155 13 chr2 7516723 7517098 -243170756 - MSTA LTR MaLR 0 428 1 22 0 0 0 chr2 7517263 7517285 -243170569 + AT_rich Low_complexity Low_complexity 1 22 0 267 303 0 13 chr2 7518317 7518393 -243169461 - MIR SINE MIR -26 236 162 297 129 32 32 chr2 7518396 7518458 -243169396 - MLT2B1 LTR ERVL 0 520 459 232 271 12 24 chr2 7518458 7518543 -243169311 - L1MC4 LINE L1 -1345 6697 6614 491 270 6 0 chr2 7518544 7518718 -243169136 + (TA)n Simple_repeat Simple_repeat 1 175 0 342 0 0 0 chr2 7518749 7518787 -243169067 + (TG)n Simple_repeat Simple_repeat 2 39 0 233 196 39 0 chr2 7518788 7518839 -243169015 + MLT2B1 LTR ERVL 468 520 0 242 271 59 0 chr2 7519026 7519111 -243168743 - L1MC4 LINE L1 -1339 6703 6614 244 160 40 0 chr2 7519150 7519200 -243168654 + MLT2B1 LTR ERVL 464 515 -5 288 253 0 13 chr2 7519205 7519284 -243168570 + MIR SINE MIR 159 236 -26 2410 150 7 6 chr2 7519327 7519711 -243168143 - MLT2D LTR ERVL -40 480 1 366 327 32 6 chr2 7519711 7519867 -243167987 - MIR SINE MIR -99 163 4 186 236 0 0 chr2 7520161 7520216 -243167638 + (TG)n Simple_repeat Simple_repeat 1 55 0 361 347 40 6 chr2 7520385 7520561 -243167293 + MIR SINE MIR 47 228 -34 1913 147 10 10 chr2 7520698 7520990 -243166864 + AluSx SINE Alu 1 292 -20 251 340 65 50 chr2 7521823 7522410 -243165444 - L2 LINE L2 -25 3247 2654 2222 218 23 14 chr2 7522411 7522893 -243164961 + L1MB5 LINE L1 5663 6139 -41 2162 86 0 7 chr2 7522893 7523171 -243164683 + AluY SINE Alu 1 276 -35 270 0 0 0 chr2 7523176 7523206 -243164648 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 2222 218 23 14 chr2 7523206 7523246 -243164608 + L1MB5 LINE L1 6142 6180 0 597 270 110 5 chr2 7523548 7523748 -243164106 - Charlie8 DNA MER1_type -2193 224 4 1163 263 71 30 chr2 7524237 7524728 -243163126 - LTR53 LTR ERVL -8 511 1 500 280 54 18 chr2 7525100 7525268 -243162586 - MIR SINE MIR -61 201 28 252 0 0 0 chr2 7525557 7525585 -243162269 + (TA)n Simple_repeat Simple_repeat 2 29 0 310 277 69 10 chr2 7526498 7526599 -243161255 + MIR SINE MIR 112 218 -44 2431 134 22 3 chr2 7526616 7526973 -243160881 + THE1B LTR MaLR 1 364 0 688 265 23 55 chr2 7527019 7527276 -243160578 - MIR SINE MIR 0 262 14 387 247 11 0 chr2 7527332 7527425 -243160429 - MIR SINE MIR -74 188 95 691 224 21 0 chr2 7527502 7527645 -243160209 + MIR SINE MIR 20 165 -97 186 43 0 0 chr2 7527678 7527701 -243160153 + (TAA)n Simple_repeat Simple_repeat 2 24 0 284 205 137 43 chr2 7527754 7527871 -243159983 + MER5A DNA MER1_type 9 136 -53 244 340 21 0 chr2 7528441 7528538 -243159316 - MER5A DNA MER1_type -5 184 86 2147 178 63 25 chr2 7528540 7528803 -243159051 - MLT1C LTR MaLR -1 466 178 348 24 0 0 chr2 7528803 7528844 -243159010 + (TG)n Simple_repeat Simple_repeat 2 42 0 2147 178 63 25 chr2 7528844 7529023 -243158831 - MLT1C LTR MaLR -289 178 7 191 59 0 59 chr2 7529392 7529426 -243158428 + (GAAA)n Simple_repeat Simple_repeat 1 32 0 360 0 0 0 chr2 7532860 7532900 -243154954 + (CA)n Simple_repeat Simple_repeat 1 40 0 2443 53 0 16 chr2 7532929 7533232 -243154622 - AluY SINE Alu -13 298 1 21 0 0 0 chr2 7533290 7533311 -243154543 + AT_rich Low_complexity Low_complexity 1 21 0 1176 137 0 0 chr2 7534329 7534497 -243153357 - AluSg/x SINE Alu -8 304 137 2275 114 3 0 chr2 7534791 7535099 -243152755 - AluSp SINE Alu -4 309 1 425 87 159 0 chr2 7537098 7537167 -243150687 + MADE1 DNA Mariner 1 80 0 862 165 0 0 chr2 7537819 7537952 -243149902 + FLAM_C SINE Alu 6 138 -5 2208 106 3 3 chr2 7538579 7538881 -243148973 - AluSp SINE Alu -11 302 1 350 274 21 17 chr2 7539368 7539567 -243148287 - L1ME4a LINE L1 -188 5933 5698 376 369 122 4 chr2 7539695 7539950 -243147904 - L3 LINE CR1 -864 713 429 206 62 31 0 chr2 7540102 7540134 -243147720 + (GAAAA)n Simple_repeat Simple_repeat 1 33 0 207 265 0 29 chr2 7540987 7541055 -243146799 - MIR SINE MIR 0 262 197 2067 132 35 6 chr2 7541059 7541370 -243146484 - MER2 DNA MER2_type -5 340 21 644 265 24 12 chr2 7541379 7541545 -243146309 - MIR SINE MIR -88 174 7 196 260 73 52 chr2 7541621 7541717 -243146137 - MIR SINE MIR -163 99 2 245 302 137 40 chr2 7542838 7542903 -243144951 - MIR SINE MIR 0 262 205 321 26 0 0 chr2 7542903 7542941 -243144913 + (TG)n Simple_repeat Simple_repeat 2 39 0 245 302 137 40 chr2 7542941 7543082 -243144772 - MIR SINE MIR -57 205 39 229 326 102 17 chr2 7544887 7545023 -243142831 + MIR3 SINE MIR 35 189 -19 364 322 66 61 chr2 7545220 7545677 -243142177 + L1M4 LINE L1 4818 5276 -870 6939 208 69 44 chr2 7545701 7547638 -243140216 + L1MDa LINE L1 311 2295 -4245 302 212 0 212 chr2 7547674 7547810 -243140044 + L1MDa LINE L1 2956 3029 -3511 2529 83 0 0 chr2 7547810 7548123 -243139731 - AluSq SINE Alu 0 313 1 302 212 0 212 chr2 7548123 7548208 -243139646 + L1MDa LINE L1 3029 3130 -3410 265 107 18 36 chr2 7548210 7548266 -243139588 + (GAAA)n Simple_repeat Simple_repeat 3 57 0 1808 289 47 7 chr2 7548279 7548996 -243138858 + L1MDa LINE L1 3134 3879 -2661 711 242 50 0 chr2 7549026 7549187 -243138667 + L1MD1 LINE L1 6055 6223 -19 618 265 52 45 chr2 7549364 7549768 -243138086 + L1MEc LINE L1 801 1207 -5356 1033 164 61 5 chr2 7549780 7549994 -243137860 + AluJb SINE Alu 86 311 -1 262 304 44 0 chr2 7550023 7550158 -243137696 + L1MEc LINE L1 1246 1386 -5177 1596 263 72 63 chr2 7550175 7550305 -243137549 + L1MEc LINE L1 1334 1461 -4921 1507 164 33 18 chr2 7550305 7550580 -243137274 + AluSq SINE Alu 23 301 -12 1596 263 72 63 chr2 7550580 7551693 -243136161 + L1MEc LINE L1 1461 2701 -3681 30611 33 0 1 chr2 7551699 7556078 -243131776 + L1PA4 LINE L1 1777 6152 -3 3827 231 42 35 chr2 7556093 7557345 -243130509 + L1MEc LINE L1 2709 3969 -2413 192 158 0 0 chr2 7557606 7557644 -243130210 + (CA)n Simple_repeat Simple_repeat 1 38 0 21 0 0 0 chr2 7557855 7557876 -243129978 + AT_rich Low_complexity Low_complexity 1 21 0 182 203 108 54 chr2 7558027 7558101 -243129753 + MIR SINE MIR 112 189 -73 2153 74 15 4 chr2 7558134 7558405 -243129449 - AluSc SINE Alu -7 302 29 735 285 45 4 chr2 7558502 7558748 -243129106 + MIR SINE MIR 3 258 -4 409 317 94 6 chr2 7559251 7559431 -243128423 + MIR SINE MIR 53 248 -14 25 0 0 0 chr2 7559884 7559909 -243127945 + AT_rich Low_complexity Low_complexity 1 25 0 1008 72 0 226 chr2 7560006 7560227 -243127627 - Charlie3 DNA MER1_type -8 2702 2532 321 322 72 90 chr2 7560275 7560620 -243127234 - L1MEd LINE L1 -5769 350 12 23 0 0 0 chr2 7560640 7560663 -243127191 + AT_rich Low_complexity Low_complexity 1 23 0 281 233 189 83 chr2 7560877 7561057 -243126797 - MLT1J LTR MaLR -189 322 124 280 271 90 14 chr2 7561620 7561764 -243126090 - HAL1b LINE L1 -511 837 683 298 236 36 0 chr2 7561764 7561874 -243125980 + CT-rich Low_complexity Low_complexity 4 117 0 340 330 52 16 chr2 7562031 7562225 -243125629 - HAL1b LINE L1 -801 547 347 355 223 18 0 chr2 7562751 7562863 -243124991 + (TA)n Simple_repeat Simple_repeat 2 115 0 198 143 0 0 chr2 7564391 7564426 -243123428 + (CA)n Simple_repeat Simple_repeat 2 36 0 207 360 12 0 chr2 7564426 7564512 -243123342 + L3 LINE CR1 1335 1421 -156 948 122 23 0 chr2 7565746 7565918 -243121936 + CT-rich Low_complexity Low_complexity 4 179 0 282 29 0 0 chr2 7566057 7566092 -243121762 + (TG)n Simple_repeat Simple_repeat 1 35 0 182 265 20 0 chr2 7566499 7566548 -243121306 - L2 LINE L2 -1 3312 3263 180 0 0 0 chr2 7566751 7566771 -243121083 + (A)n Simple_repeat Simple_repeat 1 20 0 274 178 68 14 chr2 7566908 7566981 -243120873 + MER116 DNA Mariner 2 78 -2 824 234 10 39 chr2 7569337 7569542 -243118312 + MER58A DNA MER1_type 21 219 -5 249 312 104 40 chr2 7569784 7569986 -243117868 - L3 LINE CR1 -26 1551 1337 304 370 7 22 chr2 7570370 7570505 -243117349 + MIR3 SINE MIR 10 142 -66 224 277 71 36 chr2 7571150 7571262 -243116592 + MER5A DNA MER1_type 10 125 -64 2132 117 176 16 chr2 7571329 7571698 -243116156 - MSTA LTR MaLR 0 428 1 1007 167 0 0 chr2 7571913 7572069 -243115785 + AluSg/x SINE Alu 135 290 -20 312 307 97 40 chr2 7572079 7572307 -243115547 - L2 LINE L2 -924 2390 2150 185 116 0 47 chr2 7572294 7572337 -243115517 + (GAGAA)n Simple_repeat Simple_repeat 5 45 0 * 1969 201 52 0 chr2 7574126 7574530 -243113324 - MLT1C LTR MaLR -9 458 34 189 154 0 0 chr2 7574533 7574572 -243113282 + T-rich Low_complexity Low_complexity 1 39 0 244 366 20 0 chr2 7574612 7574713 -243113141 - L2 LINE L2 -28 3244 3142 376 278 148 61 chr2 7575329 7575559 -243112295 + MIR SINE MIR 5 254 -8 205 323 15 0 chr2 7575638 7575703 -243112151 + L2 LINE L2 3207 3272 0 2689 148 38 68 chr2 7576485 7576671 -243111183 - L1MA4 LINE L1 -8 6292 6102 1905 141 11 7 chr2 7576671 7576955 -243110899 + AluSx SINE Alu 1 285 -27 2689 148 38 68 chr2 7576955 7576968 -243110886 - L1MA4 LINE L1 -198 6102 6090 288 0 0 0 chr2 7576968 7577000 -243110854 + (TA)n Simple_repeat Simple_repeat 1 32 0 2689 148 38 68 chr2 7577000 7577359 -243110495 - L1MA4 LINE L1 -210 6090 5750 289 289 0 0 chr2 7578417 7578500 -243109354 + MIR SINE MIR 172 254 -8 1798 188 61 54 chr2 7578566 7579264 -243108590 + L1ME4a LINE L1 2074 2755 -3785 1047 161 11 0 chr2 7579266 7579440 -243108414 + AluSg/x SINE Alu 137 312 0 6933 231 91 47 chr2 7579440 7582618 -243105236 + L1ME4a LINE L1 2746 6066 -687 537 95 24 0 chr2 7582626 7582710 -243105144 + L1MD2 LINE L1 6272 6357 -2 222 272 27 95 chr2 7582753 7582900 -243104954 + L2 LINE L2 3168 3304 -9 426 313 97 14 chr2 7583187 7583404 -243104450 - MIR SINE MIR 0 262 28 1780 188 0 0 chr2 7583523 7583836 -243104018 - AluJb SINE Alu 0 313 1 2111 115 26 10 chr2 7584250 7584554 -243103300 + AluSq SINE Alu 1 309 -4 450 287 8 0 chr2 7586957 7587079 -243100775 + MER94 DNA DNA 7 129 -5 320 260 7 55 chr2 7588315 7588461 -243099393 + L1ME4a LINE L1 6362 6500 -15 843 159 0 0 chr2 7589792 7589924 -243097930 + FLAM_C SINE Alu 2 133 0 225 231 51 51 chr2 7590219 7590297 -243097557 + MIR SINE MIR 111 188 -74 33 66 0 0 chr2 7590411 7590472 -243097382 + AT_rich Low_complexity Low_complexity 1 61 0 195 129 0 0 chr2 7590904 7590935 -243096919 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 183 184 20 20 chr2 7591191 7591240 -243096614 + MIR SINE MIR 25 73 -135 1302 171 80 47 chr2 7592263 7592562 -243095292 + AluJo SINE Alu 4 312 0 1320 219 67 31 chr2 7593829 7594189 -243093665 - MLT1B LTR MaLR -2 388 14 189 242 0 15 chr2 7594736 7594802 -243093052 - L2 LINE L2 -3 3269 3205 314 245 0 57 chr2 7595270 7595400 -243092454 + MIR SINE MIR 85 205 -57 280 284 159 28 chr2 7595502 7595678 -243092176 + MIR SINE MIR 21 219 -43 1931 173 80 30 chr2 7596090 7596504 -243091350 - MLT2D LTR ERVL 0 534 1 334 278 31 0 chr2 7596504 7596601 -243091253 + L2 LINE L2 3172 3271 -1 227 313 117 0 chr2 7597274 7597402 -243090452 - MIR3 SINE MIR -24 184 42 2946 198 37 7 chr2 7598922 7599537 -243088317 - MER99 DNA DNA -3 825 192 38 22 0 0 chr2 7600171 7600216 -243087638 + AT_rich Low_complexity Low_complexity 1 45 0 482 272 0 0 chr2 7600216 7600319 -243087535 - MER99 DNA DNA -724 104 2 353 283 126 31 chr2 7600861 7601084 -243086770 - LTR16A LTR ERVL -1 449 206 1603 181 54 7 chr2 7601243 7601541 -243086313 - AluJo SINE Alu 0 312 1 1223 248 97 16 chr2 7602903 7603456 -243084398 + L1MEc LINE L1 2202 2770 -3445 743 343 65 14 chr2 7603456 7604022 -243083832 - L1MEc LINE L1 -5754 642 48 560 269 22 0 chr2 7604307 7604441 -243083413 + MLT1J1 LTR MaLR 2 138 -308 2394 103 0 0 chr2 7604763 7605065 -243082789 - AluSx SINE Alu -10 302 1 283 286 60 0 chr2 7605471 7605555 -243082299 + LTR50 LTR ERVL 1 89 -706 1708 188 3 13 chr2 7607083 7607397 -243080457 + AluJb SINE Alu 1 311 -1 2277 163 143 13 chr2 7608025 7608544 -243079310 + LTR49 LTR ERV1 1 653 0 2028 246 51 22 chr2 7609064 7609609 -243078245 - MER119 DNA MER1_type -5 578 18 296 278 122 0 chr2 7609668 7609783 -243078071 + MIR SINE MIR 43 171 -37 271 296 44 37 chr2 7609903 7610038 -243077816 - MER5A DNA MER1_type -36 153 18 394 290 82 30 chr2 7611459 7611612 -243076242 - MIR SINE MIR -13 249 79 1967 132 31 0 chr2 7611612 7611899 -243075955 - AluY SINE Alu -15 296 1 394 290 82 30 chr2 7611899 7611976 -243075878 - MIR SINE MIR -183 79 7 1863 149 3 10 chr2 7612005 7612293 -243075561 + AluSx SINE Alu 1 286 -26 1128 184 130 27 chr2 7614574 7614873 -243072981 + MLT1C LTR MaLR 1 330 -137 687 241 0 14 chr2 7615044 7615185 -243072669 + MLT1C LTR MaLR 329 467 0 188 234 0 0 chr2 7616525 7616572 -243071282 - L2 LINE L2 -5 3308 3262 305 221 207 21 chr2 7616861 7617006 -243070848 + MIR SINE MIR 76 247 -15 2563 98 16 19 chr2 7617519 7617895 -243069959 + THE1C LTR MaLR 1 375 0 209 293 73 16 chr2 7619831 7619954 -243067900 + L2 LINE L2 3184 3313 0 23 54 0 0 chr2 7621064 7621101 -243066753 + AT_rich Low_complexity Low_complexity 1 37 0 203 388 0 0 chr2 7621515 7621595 -243066259 + L2 LINE L2 3190 3269 -3 2048 134 30 35 chr2 7621665 7622031 -243065823 + THE1B LTR MaLR 1 364 0 237 291 27 18 chr2 7623067 7623177 -243064677 - MER87 LTR ERV1 -32 509 399 195 364 34 17 chr2 7623549 7623667 -243064187 + MIR3 SINE MIR 4 123 -85 561 294 93 4 chr2 7623910 7624179 -243063675 - L1MCb LINE L1 -5163 882 590 26 0 0 0 chr2 7624313 7624339 -243063515 + AT_rich Low_complexity Low_complexity 1 26 0 321 335 34 28 chr2 7624518 7624694 -243063160 + MER5B DNA MER1_type 2 178 0 196 346 19 0 chr2 7624705 7624809 -243063045 + MER5A DNA MER1_type 4 109 -80 1343 229 15 76 chr2 7624879 7625285 -243062569 - MLT1B LTR MaLR -9 381 1 5307 98 35 4 chr2 7625438 7626189 -243061665 + MER4E LTR ERV1 1 774 -5 2003 114 4 0 chr2 7627188 7627491 -243060363 - AluSx SINE Alu 0 304 1 2037 108 10 25 chr2 7628105 7628419 -243059435 + AluSp SINE Alu 1 309 -4 204 322 77 7 chr2 7629018 7629161 -243058693 - MIR SINE MIR -62 200 48 264 317 12 0 chr2 7630069 7630151 -243057703 - MIR SINE MIR -107 155 73 663 153 0 0 chr2 7630261 7630392 -243057462 + (TAG)n Simple_repeat Simple_repeat 2 132 0 427 206 125 22 chr2 7630393 7630529 -243057325 - MIR SINE MIR -1 261 112 21 0 0 0 chr2 7632170 7632191 -243055663 + AT_rich Low_complexity Low_complexity 1 21 0 2106 96 4 0 chr2 7633748 7634062 -243053792 + AluSx SINE Alu 1 315 0 456 311 38 16 chr2 7634454 7634637 -243053217 + MIR SINE MIR 8 194 -68 213 94 0 0 chr2 7635135 7635167 -243052687 + (TCC)n Simple_repeat Simple_repeat 2 33 0 214 308 77 10 chr2 7635433 7635537 -243052317 - MIR SINE MIR -50 212 102 187 216 0 78 chr2 7636213 7636264 -243051590 - L2 LINE L2 -6 3307 3261 598 219 139 0 chr2 7638898 7639049 -243048805 + MIR SINE MIR 47 218 -44 1337 225 8 0 chr2 7640622 7640871 -243046983 + MLT1C LTR MaLR 207 457 -10 274 227 13 27 chr2 7640929 7641004 -243046850 + Charlie7 DNA MER1_type 29 102 -2510 23 68 0 0 chr2 7641108 7641152 -243046702 + AT_rich Low_complexity Low_complexity 1 44 0 2012 137 0 0 chr2 7641234 7641534 -243046320 + AluSq SINE Alu 11 310 -3 479 309 124 18 chr2 7642271 7642488 -243045366 + MIR SINE MIR 12 251 -11 2174 282 129 18 chr2 7643401 7644274 -243043580 + L2 LINE L2 1576 2545 -769 15569 123 27 5 chr2 7644344 7646704 -243041150 - Tigger1 DNA MER2_type -6 2412 1 304 240 62 121 chr2 7646839 7647294 -243040560 - L1MCc LINE L1 -4892 1531 1300 2396 97 77 3 chr2 7647425 7647764 -243040090 + THE1B LTR MaLR 1 364 0 294 333 140 0 chr2 7648101 7648215 -243039639 + MIR SINE MIR 97 226 -36 418 326 80 29 chr2 7649994 7650169 -243037685 - MIR3 SINE MIR -5 203 20 204 221 143 52 chr2 7650470 7650624 -243037230 - MIR3 SINE MIR -34 174 7 351 304 52 26 chr2 7650652 7650767 -243037087 - L2 LINE L2 -4 3309 3192 519 261 56 6 chr2 7651230 7651391 -243036463 - MER5B DNA MER1_type -8 170 2 2113 98 44 3 chr2 7651494 7651791 -243036063 + AluSq SINE Alu 1 309 -4 1028 119 68 6 chr2 7651852 7652029 -243035825 + MER53 DNA DNA 2 189 0 2017 140 7 0 chr2 7652223 7652531 -243035323 - AluSx SINE Alu -2 310 1 240 210 84 119 chr2 7652608 7652751 -243035103 - MIR SINE MIR -40 222 85 1205 199 66 6 chr2 7653635 7654073 -243033781 - MLT2B1 LTR ERVL 0 515 1 205 238 0 0 chr2 7654319 7654361 -243033493 + (CACG)n Simple_repeat Simple_repeat 4 45 0 2118 101 20 7 chr2 7654822 7655119 -243032735 - AluSx SINE Alu -11 301 1 245 360 141 27 chr2 7655442 7655853 -243032001 + L2 LINE L2 2851 3308 -5 279 0 0 0 chr2 7656213 7656244 -243031610 + (CACAA)n Simple_repeat Simple_repeat 4 34 0 2310 84 3 3 chr2 7656863 7657171 -243030683 - AluSp SINE Alu -5 308 1 295 268 14 0 chr2 7657171 7657242 -243030612 - MER5A DNA MER1_type -112 77 6 533 278 36 29 chr2 7660147 7660424 -243027430 + L1ME3A LINE L1 3803 4081 -2065 1970 153 38 46 chr2 7660426 7660793 -243027061 - THE1B LTR MaLR 0 364 1 364 327 36 0 chr2 7660836 7660946 -243026908 + MIR SINE MIR 16 129 -133 1699 182 90 54 chr2 7660952 7661396 -243026458 + MER31B LTR ERV1 7 466 0 511 260 0 0 chr2 7661403 7661530 -243026324 + MIR SINE MIR 136 262 0 21 0 0 0 chr2 7661608 7661629 -243026225 + AT_rich Low_complexity Low_complexity 1 21 0 1951 111 18 0 chr2 7661674 7661977 -243025877 + AluSp SINE Alu 1 308 0 328 293 79 0 chr2 7662058 7662273 -243025581 + L1ME3A LINE L1 4388 4619 -1527 237 233 58 39 chr2 7662323 7662426 -243025428 + L1ME3A LINE L1 4733 4837 -1309 357 281 80 76 chr2 7662457 7662681 -243025173 - MIR SINE MIR -4 258 34 233 179 0 0 chr2 7662984 7663023 -243024831 + L1ME3A LINE L1 5670 5708 -413 335 299 103 8 chr2 7663036 7663153 -243024701 + L1ME3A LINE L1 5743 5870 -300 1912 156 0 0 chr2 7663454 7663761 -243024093 + AluSx SINE Alu 1 307 -5 1212 302 160 43 chr2 7663770 7664320 -243023534 - L2 LINE L2 -633 2681 2197 2149 182 31 43 chr2 7664320 7664831 -243023023 + MLT1D LTR MaLR 1 505 0 1212 302 160 43 chr2 7664831 7665256 -243022598 - L2 LINE L2 -1117 2197 1592 432 336 32 19 chr2 7665340 7665584 -243022270 - LTR16A LTR ERVL -184 266 17 180 111 0 0 chr2 7665835 7665862 -243021992 + (GGGAA)n Simple_repeat Simple_repeat 2 28 0 194 348 29 0 chr2 7665921 7665990 -243021864 + MIR SINE MIR 64 134 -128 198 0 0 0 chr2 7666735 7666757 -243021097 + (TC)n Simple_repeat Simple_repeat 1 22 0 252 200 42 83 chr2 7667430 7667550 -243020304 + L1M4 LINE L1 2302 2416 -3730 195 42 0 0 chr2 7667583 7667607 -243020247 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 710 296 73 52 chr2 7667750 7667761 -243020093 - LTR16A LTR ERVL -59 398 389 2360 120 3 55 chr2 7667761 7668145 -243019709 + THE1B LTR MaLR 1 364 0 710 296 73 52 chr2 7668145 7668499 -243019355 - LTR16A LTR ERVL -68 389 16 654 352 43 26 chr2 7668647 7669229 -243018625 - HERV16 LTR ERVL -381 5383 4792 990 317 85 38 chr2 7669347 7670184 -243017670 - HERV16 LTR ERVL -879 4606 3718 1108 350 72 3 chr2 7670687 7671218 -243016636 - HERV16 LTR ERVL -1905 3091 2617 1167 291 81 31 chr2 7671421 7672285 -243015569 - HERV16 LTR ERVL -2381 2615 1715 1170 307 124 22 chr2 7672335 7673135 -243014719 - HERV16 LTR ERVL -3420 1576 818 753 77 19 0 chr2 7673167 7673271 -243014583 - AluY SINE Alu -9 302 197 284 315 63 9 chr2 7673295 7673406 -243014448 - HERV16 LTR ERVL -4347 649 533 278 277 0 0 chr2 7673474 7673539 -243014315 - HERV16 LTR ERVL -4570 426 362 768 264 30 26 chr2 7673733 7673964 -243013890 - LTR16A LTR ERVL -13 437 206 186 43 0 0 chr2 7674332 7674355 -243013499 + (TTG)n Simple_repeat Simple_repeat 2 24 0 763 162 0 0 chr2 7674364 7674481 -243013373 - FLAM_C SINE Alu -16 117 1 487 172 11 11 chr2 7674566 7674659 -243013195 - AluJ/FLAM SINE Alu -218 94 2 215 185 77 0 chr2 7675226 7675291 -243012563 + L2 LINE L2 3168 3237 -35 506 272 30 18 chr2 7676112 7676281 -243011573 + MIR SINE MIR 53 223 -39 187 359 23 23 chr2 7676462 7676593 -243011261 + MIR3 SINE MIR 51 181 -27 269 355 9 9 chr2 7677374 7677484 -243010370 + MIR3 SINE MIR 69 178 -30 1789 84 44 0 chr2 7678860 7679085 -243008769 + AluSq SINE Alu 1 235 -78 213 382 73 0 chr2 7679099 7679235 -243008619 + MIR3 SINE MIR 16 161 -47 237 343 114 14 chr2 7680093 7680233 -243007621 + L2 LINE L2 3118 3271 -1 193 222 206 0 chr2 7680275 7680338 -243007516 - L2 LINE L2 0 3272 3197 1027 206 40 0 chr2 7681033 7681261 -243006593 + MIR SINE MIR 25 261 -1 21 0 0 0 chr2 7681269 7681290 -243006564 + AT_rich Low_complexity Low_complexity 1 21 0 1622 197 49 42 chr2 7682921 7683307 -243004547 + MER63B DNA MER1_type 43 431 -5 221 342 28 0 chr2 7683848 7683994 -243003860 + MIR SINE MIR 15 146 -62 525 228 93 25 chr2 7684230 7684392 -243003462 + MER58B DNA MER1_type 169 341 0 191 287 42 77 chr2 7684785 7684917 -243002937 + MIR SINE MIR 36 169 -39 258 328 69 46 chr2 7684926 7685057 -243002797 - MER5A DNA MER1_type -22 167 34 435 19 0 0 chr2 7685210 7685262 -243002592 + (CA)n Simple_repeat Simple_repeat 2 53 0 219 238 0 49 chr2 7685966 7686043 -243001811 + CT-rich Low_complexity Low_complexity 1 116 0 185 288 188 29 chr2 7687035 7687205 -243000649 + MIR SINE MIR 34 230 -32 221 361 97 7 chr2 7687511 7687666 -243000188 - MIR3 SINE MIR -21 187 19 290 304 105 21 chr2 7687681 7687872 -242999982 + MIR SINE MIR 8 214 -48 222 284 231 12 chr2 7688721 7688890 -242998964 - MIR SINE MIR 0 262 57 1889 40 0 5 chr2 7689203 7689427 -242998427 - AluY SINE Alu -87 224 2 311 350 29 15 chr2 7689575 7689712 -242998142 - MER5A DNA MER1_type -48 141 3 354 23 0 0 chr2 7690089 7690132 -242997722 + (TTTTG)n Simple_repeat Simple_repeat 2 44 0 2307 75 0 39 chr2 7690138 7690444 -242997410 - AluY SINE Alu -17 294 1 618 253 54 5 chr2 7691778 7691964 -242995890 + MIR SINE MIR 21 215 -47 242 324 15 0 chr2 7692376 7692444 -242995410 - L2 LINE L2 -219 3053 2985 2321 110 0 0 chr2 7693121 7693430 -242994424 + AluSc SINE Alu 1 309 0 368 271 65 0 chr2 7694029 7694136 -242993718 + MIR SINE MIR 119 232 -30 2189 110 0 43 chr2 7694171 7694498 -242993356 - AluSq SINE Alu 0 313 1 2383 92 7 0 chr2 7694909 7695212 -242992642 - AluSp SINE Alu -7 306 2 27 0 0 0 chr2 7695221 7695248 -242992606 + AT_rich Low_complexity Low_complexity 1 27 0 572 222 105 99 chr2 7696259 7696517 -242991337 + L1ME LINE L1 5504 5763 -407 481 168 19 0 chr2 7696592 7696699 -242991155 + (TA)n Simple_repeat Simple_repeat 1 109 0 2272 305 36 29 chr2 7696718 7697606 -242990248 + L1ME3A LINE L1 105 1224 -5635 897 239 81 10 chr2 7697864 7698161 -242989693 + L1ME3A LINE L1 1851 2168 -4791 * 1561 160 39 11 chr2 7698151 7698432 -242989422 + L1P LINE L1 3443 3731 -2415 3193 224 44 15 chr2 7698455 7699948 -242987906 + L1ME3A LINE L1 5425 6970 -11 1040 223 100 73 chr2 7701240 7701679 -242986175 - MLT2B1 LTR ERVL 0 520 70 927 108 31 0 chr2 7701681 7701810 -242986044 + AluSq/x SINE Alu 1 133 -179 383 183 14 0 chr2 7701819 7701890 -242985964 - MLT2B1 LTR ERVL -440 75 4 2268 111 0 0 chr2 7702437 7702734 -242985120 - AluSq SINE Alu -16 297 1 1299 206 104 41 chr2 7702823 7703188 -242984666 + MLT1B LTR MaLR 3 390 0 2288 109 0 10 chr2 7704045 7704357 -242983497 + AluSc SINE Alu 1 309 0 343 324 9 18 chr2 7704792 7704903 -242982951 - MIR SINE MIR -69 139 30 210 154 0 0 chr2 7705454 7705493 -242982361 + T-rich Low_complexity Low_complexity 3 41 0 2200 125 0 0 chr2 7706029 7706325 -242981529 - AluSx SINE Alu -16 296 1 504 224 33 26 chr2 7706347 7706499 -242981355 - MIR SINE MIR 0 262 110 283 23 23 0 chr2 7707231 7707275 -242980579 - L1MA3 LINE L1 0 6305 6261 1068 242 148 24 chr2 7707407 7707746 -242980108 + MLT1F LTR MaLR 133 513 -29 26 50 0 0 chr2 7707901 7707941 -242979913 + AT_rich Low_complexity Low_complexity 1 40 0 765 229 48 19 chr2 7707975 7708185 -242979669 + AluJo SINE Alu 5 220 -92 325 278 56 89 chr2 7708256 7708416 -242979438 + MER46C DNA MER2_type 7 156 -182 1934 104 4 0 chr2 7708416 7708665 -242979189 + AluSp SINE Alu 2 251 -62 325 278 56 89 chr2 7708665 7708774 -242979080 + MER46C DNA MER2_type 156 267 -71 1457 123 21 8 chr2 7708799 7709034 -242978820 + AluY SINE Alu 5 242 -69 402 316 0 0 chr2 7709262 7709433 -242978421 + A-rich Low_complexity Low_complexity 1 171 0 303 260 0 39 chr2 7709537 7709641 -242978213 - MIR SINE MIR -57 151 52 520 271 51 38 chr2 7709694 7709898 -242977956 + MIR SINE MIR 3 209 -53 2207 118 0 29 chr2 7710591 7710905 -242976949 + AluSx SINE Alu 1 305 -7 2157 112 3 13 chr2 7710918 7711222 -242976632 + AluSq SINE Alu 1 301 -12 1525 141 12 8 chr2 7711293 7711534 -242976320 + AluSq SINE Alu 1 242 -71 461 314 107 0 chr2 7711761 7711930 -242975924 + L1MC/D LINE L1 5525 5711 -2097 1005 209 29 9 chr2 7712014 7712224 -242975630 + AluJo SINE Alu 81 294 -18 1881 140 25 0 chr2 7712380 7712658 -242975196 + AluSx SINE Alu 1 285 -27 268 24 24 24 chr2 7712665 7712707 -242975147 + (TAAAA)n Simple_repeat Simple_repeat 4 45 0 254 289 7 94 chr2 7713006 7713155 -242974699 + MIR3 SINE MIR 59 194 -14 2354 98 0 0 chr2 7713431 7713727 -242974127 + AluY SINE Alu 1 296 -15 1176 187 52 38 chr2 7713828 7714095 -242973759 + AluJo SINE Alu 1 271 -41 268 284 0 11 chr2 7714454 7714542 -242973312 + CT-rich Low_complexity Low_complexity 3 89 0 1853 166 0 16 chr2 7714862 7715169 -242972685 - AluSx SINE Alu -6 306 5 1912 169 3 10 chr2 7715275 7715589 -242972265 - AluJb SINE Alu 0 312 1 185 284 20 59 chr2 7715609 7715711 -242972143 + L2 LINE L2 3139 3236 -36 372 43 0 0 chr2 7715713 7715759 -242972095 + (TGAA)n Simple_repeat Simple_repeat 2 47 0 198 217 33 24 chr2 7715869 7715963 -242971891 + MIR SINE MIR 85 181 -27 741 225 69 32 chr2 7716231 7716333 -242971521 - L1MB5 LINE L1 0 6174 6077 1714 166 0 34 chr2 7716333 7716629 -242971225 - AluJo SINE Alu -26 286 1 741 225 69 32 chr2 7716629 7716744 -242971110 - L1MB5 LINE L1 -97 6077 5949 1970 141 0 26 chr2 7716963 7717268 -242970586 - AluSx SINE Alu -15 297 1 276 100 0 0 chr2 7717330 7717370 -242970484 + (TC)n Simple_repeat Simple_repeat 1 40 0 1705 103 0 9 chr2 7717659 7717891 -242969963 + MER30 DNA MER1_type 1 230 0 1797 147 29 4 chr2 7718217 7718496 -242969358 - AluJo SINE Alu -18 294 9 2402 104 0 0 chr2 7718581 7718890 -242968964 + AluSx SINE Alu 1 309 -3 1583 155 0 4 chr2 7718990 7719229 -242968625 + AluJb SINE Alu 59 296 -16 303 223 39 77 chr2 7720001 7720131 -242967723 - L1MC5 LINE L1 -836 7125 7001 2145 130 3 0 chr2 7720132 7720431 -242967423 + AluSx SINE Alu 1 300 -12 270 113 9 209 chr2 7720648 7720750 -242967104 - L1ME1 LINE L1 -2 6176 6089 475 105 17 244 chr2 7720760 7720836 -242967018 - L1MA5A LINE L1 0 6297 6280 1767 172 3 0 chr2 7720836 7721121 -242966733 - AluJo SINE Alu -26 286 1 475 105 17 244 chr2 7721121 7721216 -242966638 - L1MA5A LINE L1 -17 6280 6165 662 127 9 0 chr2 7721240 7721350 -242966504 - L1MA5A LINE L1 -116 6181 6071 472 189 35 154 chr2 7721351 7721503 -242966351 - L1ME1 LINE L1 -59 6107 5983 2184 120 0 10 chr2 7721503 7721803 -242966051 - AluSx SINE Alu -15 297 1 472 189 35 154 chr2 7721803 7721851 -242966003 - L1ME1 LINE L1 -183 5983 5931 1243 167 26 0 chr2 7721863 7722096 -242965758 - AluSx SINE Alu -16 296 58 301 360 34 6 chr2 7722944 7723119 -242964735 + MIR SINE MIR 16 195 -67 3070 70 19 2 chr2 7723128 7723542 -242964312 + L1PA10 LINE L1 5743 6163 -5 24 0 0 0 chr2 7723618 7723642 -242964212 + AT_rich Low_complexity Low_complexity 1 24 0 621 167 79 0 chr2 7724868 7724982 -242962872 - Charlie1 DNA MER1_type -1 2760 2638 201 342 95 37 chr2 7725241 7725431 -242962423 - MIR SINE MIR -39 223 23 305 278 103 0 chr2 7725701 7725798 -242962056 + L2 LINE L2 3158 3264 -8 202 150 25 0 chr2 7725809 7725849 -242962005 + (TA)n Simple_repeat Simple_repeat 2 42 0 22 35 0 0 chr2 7725857 7725886 -242961968 + AT_rich Low_complexity Low_complexity 1 29 0 292 244 154 41 chr2 7726887 7727010 -242960844 - L2 LINE L2 -1 3312 3176 271 373 54 54 chr2 7727099 7727378 -242960476 - L2 LINE L2 -340 2974 2696 22 35 0 0 chr2 7728257 7728286 -242959568 + AT_rich Low_complexity Low_complexity 1 29 0 183 298 0 18 chr2 7728801 7728858 -242958996 - MIR SINE MIR -126 136 81 1267 265 84 62 chr2 7729052 7729190 -242958664 + MLT1H1 LTR MaLR 2 135 -420 736 209 62 0 chr2 7729190 7729367 -242958487 - MER53 DNA DNA -1 188 1 1267 265 84 62 chr2 7729367 7729714 -242958140 + MLT1H1 LTR MaLR 135 498 -57 1802 135 14 0 chr2 7729714 7729995 -242957859 + AluSc SINE Alu 1 285 -24 1079 116 7 0 chr2 7730033 7730180 -242957674 + THE1B LTR MaLR 1 148 -216 1816 150 3 3 chr2 7730641 7730935 -242956919 + AluJb SINE Alu 1 294 -18 2562 35 0 0 chr2 7731200 7731510 -242956344 + AluY SINE Alu 1 310 -1 261 0 0 0 chr2 7732599 7732628 -242955226 + (CA)n Simple_repeat Simple_repeat 1 29 0 270 0 0 0 chr2 7732704 7732734 -242955120 + (A)n Simple_repeat Simple_repeat 1 30 0 2760 115 24 21 chr2 7733877 7734302 -242953552 + MSTB LTR MaLR 1 426 0 222 313 15 0 chr2 7734932 7734999 -242952855 - MIR SINE MIR -63 145 78 252 325 150 35 chr2 7735531 7735731 -242952123 + MIR SINE MIR 34 256 -6 325 0 44 0 chr2 7736069 7736114 -242951740 + (CA)n Simple_repeat Simple_repeat 1 47 0 213 262 87 39 chr2 7736123 7736226 -242951628 + L3 LINE CR1 355 462 -1115 274 173 74 62 chr2 7736258 7736339 -242951515 - MIR SINE MIR -81 181 100 184 231 77 90 chr2 7736542 7736620 -242951234 - MIR SINE MIR -165 97 21 216 253 0 76 chr2 7738119 7738198 -242949656 - L2 LINE L2 0 3313 3241 1065 241 119 71 chr2 7739059 7739553 -242948301 + MLT1K LTR MaLR 70 587 -1 228 220 17 0 chr2 7740099 7740158 -242947696 + MER69 DNA AcHobo 22 81 -96 1065 259 69 13 chr2 7740609 7740984 -242946870 + MER69 DNA AcHobo 2094 2489 -37 1919 154 62 11 chr2 7742451 7742808 -242945046 - THE1C LTR MaLR 0 375 1 319 333 124 7 chr2 7743205 7743358 -242944496 - MIR SINE MIR -57 205 35 283 323 40 16 chr2 7743841 7743965 -242943889 + L3 LINE CR1 1385 1511 -66 1912 146 3 0 chr2 7744288 7744589 -242943265 + AluJb SINE Alu 1 302 -10 326 258 50 42 chr2 7745677 7745797 -242942057 - MIR SINE MIR -52 210 90 247 311 13 10 chr2 7745931 7746093 -242941761 - MIR SINE MIR -1 261 48 208 305 95 38 chr2 7746426 7746531 -242941323 + MER5B DNA MER1_type 54 164 -14 249 293 207 21 chr2 7746574 7746714 -242941140 + MER5A DNA MER1_type 4 169 -20 476 240 147 8 chr2 7747189 7747318 -242940536 + MIR SINE MIR 72 218 -44 180 0 0 0 chr2 7747364 7747384 -242940470 + (CA)n Simple_repeat Simple_repeat 1 20 0 297 198 58 12 chr2 7747451 7747537 -242940317 + L1ME4a LINE L1 6030 6119 -2 255 328 15 21 chr2 7747655 7747813 -242940041 + MIR SINE MIR 58 212 -50 230 154 26 0 chr2 7749099 7749138 -242938716 + MLT1I LTR MaLR 98 137 -272 569 273 97 6 chr2 7750975 7751151 -242936703 - MIR SINE MIR -55 207 16 673 296 71 4 chr2 7752786 7753012 -242934842 - MIR SINE MIR 0 262 22 223 198 49 111 chr2 7754296 7754377 -242933477 + MIR SINE MIR 111 186 -76 312 262 98 25 chr2 7754702 7754824 -242933030 + MER115 DNA AcHobo 100 230 -463 638 237 100 52 chr2 7754936 7755185 -242932669 + MER115 DNA AcHobo 426 686 -7 195 100 0 0 chr2 7755385 7755415 -242932439 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 354 230 97 26 chr2 7755415 7755528 -242932326 - L2 LINE L2 -13 3300 3180 23 0 0 0 chr2 7756139 7756162 -242931692 + AT_rich Low_complexity Low_complexity 1 23 0 1252 138 0 0 chr2 7756600 7756803 -242931051 + L1MA5 LINE L1 6097 6299 -1 700 236 44 58 chr2 7758413 7758638 -242929216 + MIR SINE MIR 31 252 -10 586 130 130 0 chr2 7759000 7759138 -242928716 + THE1B LTR MaLR 209 364 0 267 111 0 0 chr2 7759142 7759178 -242928676 + MLT1G LTR MaLR 555 590 0 1903 211 74 18 chr2 7759920 7760365 -242927489 + MLT1D LTR MaLR 36 505 0 504 324 89 12 chr2 7760377 7760624 -242927230 + L2 LINE L2 2671 2936 -378 270 307 64 21 chr2 7760624 7760819 -242927035 + MLT1J2 LTR MaLR 1 207 -239 205 293 49 37 chr2 7760889 7760971 -242926883 - L2 LINE L2 -620 2694 2612 860 245 28 36 chr2 7761009 7761262 -242926592 - MIR SINE MIR -10 252 2 2342 118 21 16 chr2 7761749 7762122 -242925732 - THE1C LTR MaLR 0 375 1 192 278 31 31 chr2 7762768 7762865 -242924989 + L2 LINE L2 2912 3008 -305 449 290 69 0 chr2 7762878 7763023 -242924831 - MIR SINE MIR -74 188 34 280 267 58 0 chr2 7763225 7763311 -242924543 - MER5A DNA MER1_type -77 112 22 509 206 109 23 chr2 7763365 7763540 -242924314 - LTR33 LTR ERVL -3 518 329 453 250 180 0 chr2 7765280 7765408 -242922446 - MIR SINE MIR -1 261 111 1926 125 21 14 chr2 7767040 7767329 -242920525 + AluSx SINE Alu 1 291 -21 306 170 0 0 chr2 7767337 7767384 -242920470 + MLT1G-int LTR MaLR 1684 1730 -5 1071 181 169 68 chr2 7767452 7767777 -242920077 - MLT1A1 LTR MaLR -7 358 1 2232 76 79 9 chr2 7768218 7768547 -242919307 + L1PB2 LINE L1 5799 6150 -1 506 284 43 38 chr2 7769428 7769544 -242918310 - L1ME4a LINE L1 -44 6077 5963 393 75 0 0 chr2 7769544 7769597 -242918257 + (CA)n Simple_repeat Simple_repeat 2 54 0 506 284 43 38 chr2 7769597 7769871 -242917983 - L1ME4a LINE L1 -158 5963 5685 240 35 0 0 chr2 7770834 7770863 -242916991 + (GGGGA)n Simple_repeat Simple_repeat 5 33 0 752 199 0 11 chr2 7770998 7771179 -242916675 + G-rich Low_complexity Low_complexity 2 180 0 201 195 0 0 chr2 7771177 7771218 -242916636 + GA-rich Low_complexity Low_complexity 1 41 0 * 310 207 14 83 chr2 7771328 7771473 -242916381 - MER103 DNA DNA 0 166 32 463 154 0 26 chr2 7771643 7771721 -242916133 + MER63 DNA MER1_type 42 743 -319 229 300 131 23 chr2 7772195 7772325 -242915529 - L2 LINE L2 -219 3053 2910 1478 211 42 20 chr2 7772920 7773275 -242914579 - MLT1A1 LTR MaLR -2 363 1 768 266 105 101 chr2 7774413 7774927 -242912927 + MLT1G LTR MaLR 18 581 -9 1437 194 24 78 chr2 7775440 7775852 -242912002 - MLT1B LTR MaLR 0 390 1 534 239 56 0 chr2 7775871 7776013 -242911841 + MLT1C LTR MaLR 317 466 -1 206 256 12 73 chr2 7776154 7776236 -242911618 + GA-rich Low_complexity Low_complexity 2 78 0 525 299 32 87 chr2 7776806 7777163 -242910691 - L2 LINE L2 -887 2427 2101 1517 252 24 37 chr2 7777163 7777674 -242910180 + MLT1D LTR MaLR 1 504 -1 525 299 32 87 chr2 7777674 7777785 -242910069 - L2 LINE L2 -1213 2101 1985 309 377 8 8 chr2 7777938 7778060 -242909794 + MIR3 SINE MIR 69 190 -18 488 125 0 12 chr2 7780257 7780337 -242907517 - L1MA5 LINE L1 -125 6175 6097 23 0 0 0 chr2 7780775 7780798 -242907056 + AT_rich Low_complexity Low_complexity 1 23 0 1580 112 20 24 chr2 7781425 7781676 -242906178 - MSTB LTR MaLR -176 250 1 875 254 94 94 chr2 7783111 7783151 -242904703 - MLT1H1 LTR MaLR 0 555 516 2546 100 19 6 chr2 7783151 7783510 -242904344 - THE1B LTR MaLR 0 364 1 875 254 94 94 chr2 7783510 7783548 -242904306 - MLT1H1 LTR MaLR -39 516 479 1804 135 14 0 chr2 7783548 7783829 -242904025 - AluSc SINE Alu -24 285 1 875 254 94 94 chr2 7783829 7784163 -242903691 - MLT1H1 LTR MaLR -75 480 142 1867 155 0 13 chr2 7784479 7784788 -242903066 + AluSx SINE Alu 1 305 -7 463 157 67 94 chr2 7785063 7785237 -242902617 - L1MA8 LINE L1 -3 6288 6120 2049 124 3 7 chr2 7785279 7785586 -242902268 + AluSx SINE Alu 1 306 -6 23 0 0 0 chr2 7785625 7785648 -242902206 + AT_rich Low_complexity Low_complexity 1 23 0 877 183 89 10 chr2 7786083 7786389 -242901465 + L1MC/D LINE L1 5122 5446 -760 272 321 46 18 chr2 7786504 7786613 -242901241 + HAL1b LINE L1 800 911 -437 471 97 0 0 chr2 7787421 7787483 -242900371 - Alu SINE Alu -255 63 2 1865 129 41 7 chr2 7787589 7787884 -242899970 + AluSx SINE Alu 3 307 -5 1241 226 79 8 chr2 7788042 7788409 -242899445 - LTR37A LTR ERV1 0 426 34 7177 58 1 0 chr2 7788526 7789747 -242898107 + L1PA7 LINE L1 4957 6178 0 1946 114 3 10 chr2 7791814 7792103 -242895751 - AluSx SINE Alu -25 287 1 1434 191 3 3 chr2 7793394 7793697 -242894157 - AluSg SINE Alu -7 303 1 1122 314 46 24 chr2 7793701 7794242 -242893612 - L2 LINE L2 -541 2773 2221 267 318 61 21 chr2 7794280 7794436 -242893418 - MIR SINE MIR -62 146 9 429 122 0 0 chr2 7794616 7794690 -242893164 + (TTCC)n Simple_repeat Simple_repeat 3 76 0 214 282 51 0 chr2 7795125 7795206 -242892648 - MIR SINE MIR -42 166 79 1012 127 10 35 chr2 7795218 7795643 -242892211 + (GGATG)n Simple_repeat Simple_repeat 1 591 0 231 146 0 0 chr2 7797060 7797101 -242890753 + (T)n Simple_repeat Simple_repeat 1 41 0 180 268 0 0 chr2 7797161 7797202 -242890652 + MIR3 SINE MIR 168 208 0 1822 153 10 3 chr2 7798202 7798510 -242889344 - AluSx SINE Alu -2 310 1 196 298 119 0 chr2 7798716 7798800 -242889054 + L2 LINE L2 3171 3264 -8 428 333 91 15 chr2 7799259 7799457 -242888397 + MIR SINE MIR 39 251 -11 210 320 87 10 chr2 7799983 7800086 -242887768 - L2 LINE L2 -4 3268 3158 332 329 73 81 chr2 7800199 7800543 -242887311 + L2 LINE L2 2932 3272 0 648 259 165 35 chr2 7800828 7800928 -242886926 + L1 LINE L1 3527 3613 -2533 1481 187 20 13 chr2 7800928 7801227 -242886627 - AluJb SINE Alu -11 301 1 648 259 165 35 chr2 7801227 7801496 -242886358 + L1 LINE L1 3613 3944 -2202 22 35 0 0 chr2 7801627 7801656 -242886198 + AT_rich Low_complexity Low_complexity 1 29 0 367 310 141 46 chr2 7801707 7801991 -242885863 + L1 LINE L1 4025 4335 -1811 1833 152 0 3 chr2 7802112 7802416 -242885438 + AluSx SINE Alu 1 303 0 23 0 0 0 chr2 7802619 7802642 -242885212 + AT_rich Low_complexity Low_complexity 1 23 0 276 296 87 36 chr2 7802866 7803062 -242884792 - L2 LINE L2 -212 3060 2855 262 232 0 0 chr2 7803142 7803198 -242884656 + MER4-int LTR ERV1 1107 1162 -5436 615 259 0 0 chr2 7803198 7803748 -242884106 + (TG)n Simple_repeat Simple_repeat 1 550 0 370 346 82 27 chr2 7803774 7804150 -242883704 - L2 LINE L2 -593 2721 2325 188 327 131 13 chr2 7804737 7804890 -242882964 - MIR SINE MIR -57 205 35 260 331 40 16 chr2 7805373 7805497 -242882357 + L3 LINE CR1 1385 1511 -66 1919 146 3 0 chr2 7805820 7806122 -242881732 + AluJb SINE Alu 1 303 -9 231 254 136 80 chr2 7807181 7807394 -242880460 - MIR SINE MIR -25 237 13 208 305 95 38 chr2 7807963 7808068 -242879786 + MER5B DNA MER1_type 54 164 -14 219 317 19 29 chr2 7808111 7808215 -242879639 + MER5A DNA MER1_type 4 106 -83 290 275 18 46 chr2 7809097 7809206 -242878648 + MIR SINE MIR 37 142 -66 324 350 0 0 chr2 7809454 7809557 -242878297 + CT-rich Low_complexity Low_complexity 4 106 0 1993 142 0 0 chr2 7809664 7809966 -242877888 + AluSx SINE Alu 1 302 -10 555 16 0 0 chr2 7809973 7810037 -242877817 + (GGAA)n Simple_repeat Simple_repeat 4 67 0 21 57 0 0 chr2 7811178 7811213 -242876641 + AT_rich Low_complexity Low_complexity 1 35 0 609 160 111 50 chr2 7811214 7811395 -242876459 + MER20 DNA MER1_type 1 192 -27 2067 125 0 0 chr2 7815402 7815699 -242872155 + AluSg SINE Alu 1 297 -13 404 236 6 0 chr2 7816216 7816394 -242871460 + CT-rich Low_complexity Low_complexity 2 180 0 542 307 53 5 chr2 7816809 7816998 -242870856 - MIR SINE MIR -1 261 64 1992 133 0 0 chr2 7817160 7817460 -242870394 + AluSx SINE Alu 1 300 -12 249 195 13 52 chr2 7819498 7819575 -242868279 - MLT1J LTR MaLR -11 604 429 535 288 112 15 chr2 7820422 7820627 -242867227 - MIR SINE MIR -10 252 28 309 150 17 0 chr2 7820974 7821034 -242866820 + MER96B DNA MER1_type? 50 110 -307 976 119 3 226 chr2 7821047 7821384 -242866470 - L1MA4 LINE L1 -9 6291 6030 493 72 0 12 chr2 7821415 7821498 -242866356 + MER96B DNA MER1_type? 97 178 -239 2193 153 75 0 chr2 7821596 7821994 -242865860 - MSTA LTR MaLR 0 428 1 329 295 0 0 chr2 7823376 7823471 -242864383 + (CA)n Simple_repeat Simple_repeat 2 96 0 223 247 0 90 chr2 7823577 7823755 -242864099 + (CCCCAA)n Simple_repeat Simple_repeat 6 167 0 242 304 78 35 chr2 7824933 7825048 -242862806 + L2 LINE L2 3186 3305 -8 408 238 57 78 chr2 7825331 7825454 -242862400 - L1ME4a LINE L1 0 6121 6002 1828 162 26 18 chr2 7825454 7825793 -242862061 - MER2 DNA MER2_type 0 344 3 408 238 57 78 chr2 7825793 7825862 -242861992 - L1ME4a LINE L1 -119 6002 5933 242 235 37 25 chr2 7825885 7825966 -242861888 + GA-rich Low_complexity Low_complexity 4 85 0 2332 71 0 0 chr2 7825991 7826285 -242861569 + AluY SINE Alu 2 295 -16 860 318 50 33 chr2 7826440 7827087 -242860767 - L1MC4a LINE L1 -489 5677 5254 480 289 114 48 chr2 7827435 7827847 -242860007 - L1MC4a LINE L1 -1374 4772 4334 193 324 59 0 chr2 7828800 7828868 -242858986 - MIR SINE MIR -6 256 185 426 208 77 54 chr2 7828900 7829030 -242858824 + Zaphod DNA AcHobo 24 156 -3875 1630 205 89 27 chr2 7829037 7829486 -242858368 + MLT1D LTR MaLR 1 477 -28 2118 244 92 34 chr2 7829516 7830300 -242857554 + Zaphod DNA AcHobo 161 989 -3042 765 184 40 17 chr2 7830301 7830475 -242857379 + Zaphod DNA AcHobo 3597 3774 -257 2057 116 7 10 chr2 7830782 7831092 -242856762 - AluSx SINE Alu -3 309 1 493 293 84 27 chr2 7831351 7831576 -242856278 + MIR SINE MIR 12 249 -13 256 245 174 52 chr2 7831652 7831807 -242856047 + MER5A DNA MER1_type 13 186 -3 513 269 40 23 chr2 7831814 7831989 -242855865 + MER5B DNA MER1_type 1 178 0 892 182 109 28 chr2 7832026 7832180 -242855674 + ORSL DNA AcHobo 9 192 -83 5560 48 6 0 chr2 7832180 7832853 -242855001 - L1PA7 LINE L1 -5 6149 5473 892 182 109 28 chr2 7832853 7832945 -242854909 + ORSL DNA AcHobo 192 275 0 198 217 0 36 chr2 7833047 7833130 -242854724 + GA-rich Low_complexity Low_complexity 3 82 0 27 0 0 0 chr2 7833601 7833628 -242854226 + AT_rich Low_complexity Low_complexity 1 27 0 291 268 0 0 chr2 7834509 7834580 -242853274 + GA-rich Low_complexity Low_complexity 3 73 0 1883 307 73 44 chr2 7835182 7835765 -242852089 + ERVL LTR ERVL 74 639 -4357 3276 133 82 0 chr2 7835765 7836252 -242851602 + MER1A DNA MER1_type 1 527 0 1883 307 73 44 chr2 7836252 7836774 -242851080 + ERVL LTR ERVL 639 1211 -3785 1094 304 92 27 chr2 7837121 7837941 -242849913 + ERVL LTR ERVL 1709 2631 -2691 348 305 106 69 chr2 7838128 7838436 -242849418 + ERVL LTR ERVL 4355 4687 -1077 1848 112 0 121 chr2 7838436 7838776 -242849078 + AluSx SINE Alu 1 299 -3 348 305 106 69 chr2 7838776 7838929 -242848925 + ERVL LTR ERVL 4687 4833 -931 294 286 84 59 chr2 7838967 7839240 -242848614 + ERVL LTR ERVL 4980 5259 -505 683 328 37 61 chr2 7839929 7840411 -242847443 + L1MEd LINE L1 811 1259 -1248 185 299 26 65 chr2 7841099 7841176 -242846678 - L2 LINE L2 -223 3049 2976 424 282 103 20 chr2 7841516 7841711 -242846143 + MIR SINE MIR 48 258 -4 1831 146 14 0 chr2 7843360 7843674 -242844180 - AluSx SINE Alu 0 312 1 340 301 9 9 chr2 7843982 7844095 -242843759 + MER94 DNA DNA 1 113 -21 185 62 0 31 chr2 7844535 7844567 -242843287 + (TA)n Simple_repeat Simple_repeat 2 32 0 21 0 0 0 chr2 7844898 7844919 -242842935 + AT_rich Low_complexity Low_complexity 1 21 0 1662 165 7 14 chr2 7844919 7845216 -242842638 + AluJb SINE Alu 1 295 -17 249 315 87 47 chr2 7846775 7846902 -242840952 + L2 LINE L2 3141 3272 0 444 258 44 85 chr2 7848426 7848570 -242839284 + L1ME4a LINE L1 5530 5661 -460 2269 97 3 0 chr2 7848570 7848880 -242838974 + AluSp SINE Alu 1 311 -2 444 258 44 85 chr2 7848880 7848983 -242838871 + L1ME4a LINE L1 5661 5767 -354 4188 80 11 25 chr2 7849057 7849619 -242838235 - MER41A LTR ERV1 0 554 1 402 366 24 0 chr2 7849628 7849792 -242838062 + MIR SINE MIR 83 250 -12 339 232 89 0 chr2 7849980 7850092 -242837762 + L1ME4a LINE L1 5991 6112 -9 241 269 0 0 chr2 7850136 7850188 -242837666 - L3 LINE CR1 -7 1570 1519 335 277 32 11 chr2 7850336 7850430 -242837424 + L2 LINE L2 3173 3268 -4 3751 142 48 2 chr2 7850585 7851192 -242836662 + MER41B LTR ERV1 1 635 0 717 237 19 13 chr2 7852452 7852608 -242835246 - MER5B DNA MER1_type -21 157 1 350 311 68 0 chr2 7853042 7853145 -242834709 - L2 LINE L2 -46 3226 3117 2747 133 166 0 chr2 7853438 7853890 -242833964 - MER1A DNA MER1_type -1 528 2 316 296 86 49 chr2 7854490 7854652 -242833202 - MIR3 SINE MIR -11 197 30 711 276 70 0 chr2 7857307 7857506 -242830348 - MIR SINE MIR -36 226 14 402 21 0 0 chr2 7860153 7860200 -242827654 + (CATA)n Simple_repeat Simple_repeat 1 47 0 473 276 21 91 chr2 7860879 7861122 -242826732 + HAL1 LINE L1 1034 1259 -1248 570 277 70 18 chr2 7861151 7861436 -242826418 + HAL1 LINE L1 1374 1673 -834 566 192 54 15 chr2 7861465 7861595 -242826259 - MIR SINE MIR -20 242 108 2256 87 0 7 chr2 7862015 7862325 -242825529 + AluY SINE Alu 1 308 -3 22 88 0 0 chr2 7862405 7862462 -242825392 + AT_rich Low_complexity Low_complexity 1 57 0 303 248 111 26 chr2 7862489 7862606 -242825248 + HAL1b LINE L1 746 872 -476 1100 173 82 8 chr2 7862634 7862965 -242824889 + L1MC/D LINE L1 5097 5446 -760 272 321 46 18 chr2 7863080 7863189 -242824665 + HAL1b LINE L1 800 911 -437 922 214 66 26 chr2 7863876 7864180 -242823674 - MER33 DNA MER1_type 0 324 9 410 318 88 7 chr2 7864448 7864596 -242823258 + MIR SINE MIR 88 247 -15 2653 10 0 0 chr2 7866237 7866533 -242821321 - AluYb8 SINE Alu -2 316 21 319 333 111 0 chr2 7866695 7866830 -242821024 + L2 LINE L2 3121 3270 -2 2188 114 0 0 chr2 7868300 7868606 -242819248 - AluSx SINE Alu -6 306 1 440 300 36 0 chr2 7868608 7868748 -242819106 - MIR SINE MIR -70 192 48 200 274 219 14 chr2 7869645 7869791 -242818063 + MIR SINE MIR 87 262 0 198 290 87 0 chr2 7870000 7870069 -242817785 - MIR SINE MIR -136 126 52 323 320 66 39 chr2 7870869 7871050 -242816804 - MIR SINE MIR -57 205 20 433 188 10 30 chr2 7871803 7871904 -242815950 - MIR3 SINE MIR -7 201 103 212 320 30 40 chr2 7872592 7872692 -242815162 + MIR SINE MIR 45 143 -65 335 333 79 12 chr2 7873779 7873944 -242813910 + L1MB4 LINE L1 4637 4812 -1334 242 266 11 21 chr2 7874011 7874105 -242813749 + L1MB4 LINE L1 4918 5010 -1136 2459 218 3 59 chr2 7874319 7874581 -242813273 + L1MB4 LINE L1 5570 5845 -335 2373 57 0 63 chr2 7874581 7874913 -242812941 + AluY SINE Alu 1 311 0 2459 218 3 59 chr2 7874913 7875289 -242812565 + L1MB4 LINE L1 5845 6174 -6 1554 202 31 17 chr2 7875289 7875646 -242812208 + L1MB7 LINE L1 5814 6175 -9 920 291 137 18 chr2 7875664 7876283 -242811571 + L1ME3A LINE L1 5263 5955 -215 1281 124 30 0 chr2 7876491 7876692 -242811162 + L1PA10 LINE L1 5962 6168 0 2200 91 18 3 chr2 7877883 7878168 -242809686 - AluSx SINE Alu -14 298 10 298 154 0 0 chr2 7878753 7878805 -242809049 + MADE1 DNA Mariner 29 80 0 754 138 0 36 chr2 7878867 7879005 -242808849 - FLAM_C SINE Alu 0 133 1 528 122 0 0 chr2 7879446 7879528 -242808326 + (TTCC)n Simple_repeat Simple_repeat 3 84 0 246 255 94 54 chr2 7881314 7881463 -242806391 - MLT1K LTR MaLR -13 575 421 217 260 77 96 chr2 7881646 7881750 -242806104 - MER5A DNA MER1_type -84 105 4 332 287 0 23 chr2 7881761 7881848 -242806006 - MIR SINE MIR -165 97 13 312 27 0 0 chr2 7883530 7883567 -242804287 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 296 283 137 47 chr2 7884909 7885121 -242802733 + MLT1L LTR MaLR 2 232 -383 35 0 0 0 chr2 7885832 7885867 -242801987 + AT_rich Low_complexity Low_complexity 1 35 0 682 324 29 11 chr2 7885882 7886154 -242801700 + MLT1L LTR MaLR 6 282 -333 400 177 76 0 chr2 7886293 7886372 -242801482 - MLT1J1 LTR MaLR -123 323 239 542 195 37 0 chr2 7886587 7886721 -242801133 - MLT1J1 LTR MaLR -277 173 25 * 547 229 30 8 chr2 7886718 7886849 -242801005 - MER45A DNA AcHobo -30 148 15 578 111 30 0 chr2 7887664 7887763 -242800091 + (ATGGTG)n Simple_repeat Simple_repeat 4 105 0 336 276 143 0 chr2 7888213 7888318 -242799536 - MIR SINE MIR -20 242 123 1787 125 86 44 chr2 7888535 7888895 -242798959 - THE1C LTR MaLR 0 375 1 315 325 24 24 chr2 7889096 7889265 -242798589 - L1ME4a LINE L1 -18 6103 5935 928 258 26 45 chr2 7889336 7889758 -242798096 - L1ME4a LINE L1 -161 5960 5547 2363 163 7 17 chr2 7891253 7891718 -242796136 - L1MB1 LINE L1 0 6168 5709 201 320 53 0 chr2 7891719 7891794 -242796060 - MIR SINE MIR -110 152 74 348 301 5 88 chr2 7892051 7892093 -242795761 - MER5B DNA MER1_type -1 177 133 2281 43 75 7 chr2 7892093 7892375 -242795479 - AluY SINE Alu -10 301 1 348 301 5 88 chr2 7892375 7892525 -242795329 - MER5B DNA MER1_type -45 133 1 338 271 47 0 chr2 7894315 7894422 -242793432 - MIR SINE MIR -48 214 103 507 211 141 14 chr2 7894662 7894804 -242793050 + MER3 DNA MER1_type 36 195 -14 411 246 42 0 chr2 7897123 7897241 -242790613 - MIR SINE MIR -62 146 24 2384 75 0 13 chr2 7897927 7898232 -242789622 - AluY SINE Alu -10 301 1 180 111 0 0 chr2 7899056 7899083 -242788771 + (GAAAA)n Simple_repeat Simple_repeat 3 29 0 979 238 125 35 chr2 7899360 7899785 -242788069 - MLT1C LTR MaLR -3 464 2 257 349 8 31 chr2 7902058 7902187 -242785667 - L3 LINE CR1 -63 1514 1389 229 280 32 32 chr2 7902259 7902352 -242785502 - MIR SINE MIR -74 188 96 216 318 59 35 chr2 7902438 7902608 -242785246 - L3 LINE CR1 -183 1394 1221 2729 131 20 4 chr2 7902732 7903189 -242784665 - L1PA16 LINE L1 0 6166 5703 299 274 228 23 chr2 7903844 7904059 -242783795 + MIR SINE MIR 1 259 -3 496 318 112 9 chr2 7904468 7904701 -242783153 + MIR SINE MIR 3 259 -3 185 91 0 30 chr2 7905520 7905553 -242782301 + (GGGA)n Simple_repeat Simple_repeat 4 35 0 434 317 54 24 chr2 7906360 7906527 -242781327 - MIR SINE MIR -70 192 21 501 269 52 68 chr2 7906539 7906978 -242780876 + L1ME4a LINE L1 5520 5951 -170 381 246 36 14 chr2 7907131 7907269 -242780585 + L1ME4a LINE L1 5965 6105 -16 1433 130 5 0 chr2 7907281 7907488 -242780366 - AluSp SINE Alu -3 310 103 2120 142 52 37 chr2 7908835 7909379 -242778475 + MLT2A2 LTR ERVL 1 554 0 1521 166 18 3 chr2 7909750 7910033 -242777821 - MLT1B LTR MaLR -8 382 96 26 30 0 0 chr2 7910055 7910088 -242777766 + AT_rich Low_complexity Low_complexity 1 33 0 1980 42 98 0 chr2 7910159 7910424 -242777430 - L1PA5 LINE L1 -7 6147 5857 241 246 53 0 chr2 7910424 7910481 -242777373 - MLT1B LTR MaLR -330 60 1 211 347 0 11 chr2 7910712 7910807 -242777047 + MIR SINE MIR 71 164 -98 2389 167 5 14 chr2 7911162 7911594 -242776260 + MSTA LTR MaLR 1 428 0 219 286 0 32 chr2 7911992 7912055 -242775799 + MIR SINE MIR 196 256 -6 363 284 17 57 chr2 7913152 7913306 -242774548 - MIR SINE MIR -14 248 100 2225 143 59 7 chr2 7913306 7913713 -242774141 + MSTA LTR MaLR 1 428 0 363 284 17 57 chr2 7913713 7913734 -242774120 - MIR SINE MIR -162 100 80 465 168 184 0 chr2 7914912 7915037 -242772817 + LTR16C LTR ERVL 228 375 -116 1108 211 81 88 chr2 7915085 7915178 -242772676 + MLT1C LTR MaLR 16 108 -359 2400 85 48 20 chr2 7915178 7915532 -242772322 - THE1B LTR MaLR 0 364 1 1108 211 81 88 chr2 7915532 7915883 -242771971 + MLT1C LTR MaLR 108 457 -10 409 175 97 35 chr2 7915892 7916006 -242771848 + LTR16C LTR ERVL 371 491 0 233 306 28 0 chr2 7916602 7916674 -242771180 + MIR3 SINE MIR 112 185 -23 191 333 76 49 chr2 7916717 7916861 -242770993 + MIR SINE MIR 109 256 -6 1159 201 30 91 chr2 7917552 7917950 -242769904 - MLT1A2 LTR MaLR 0 374 1 191 286 107 27 chr2 7918129 7918241 -242769613 - MIR SINE MIR -33 229 109 2222 123 3 0 chr2 7918252 7918552 -242769302 + AluSx SINE Alu 1 301 -11 468 353 105 0 chr2 7919405 7919595 -242768259 + MIR SINE MIR 53 262 0 235 264 132 9 chr2 7920174 7920280 -242767574 - MIR SINE MIR -65 197 79 218 81 27 0 chr2 7921018 7921055 -242766799 + (TCC)n Simple_repeat Simple_repeat 1 38 0 255 303 84 21 chr2 7921382 7921524 -242766330 + MIR SINE MIR 77 227 -35 187 328 17 0 chr2 7921844 7921902 -242765952 + L2 LINE L2 3245 3303 -10 313 236 0 0 chr2 7921918 7921990 -242765864 - MIR SINE MIR -138 124 53 487 246 46 130 chr2 7922339 7922419 -242765435 - MIR SINE MIR -2 260 175 1978 130 7 3 chr2 7922419 7922704 -242765150 + AluSx SINE Alu 6 291 -21 225 0 0 0 chr2 7922704 7922729 -242765125 + (TA)n Simple_repeat Simple_repeat 2 26 0 487 246 46 130 chr2 7922729 7922931 -242764923 - MIR SINE MIR -85 177 1 475 290 12 25 chr2 7923772 7923934 -242763920 - MER63 DNA MER1_type -276 786 1 201 133 0 0 chr2 7924178 7924208 -242763646 + MIR SINE MIR 117 146 -62 304 123 18 18 chr2 7925190 7925247 -242762607 + LTR33A LTR ERVL 447 503 -20 284 260 39 13 chr2 7926741 7926818 -242761036 + LTR67 LTR ERVL 99 177 -380 664 284 46 15 chr2 7926945 7927206 -242760648 + MLT1L LTR MaLR 347 615 0 312 343 84 17 chr2 7927234 7927412 -242760442 - L1MC4a LINE L1 -1878 5930 5741 422 261 92 15 chr2 7928583 7928713 -242759141 - MIR3 SINE MIR -16 192 53 419 308 39 19 chr2 7928737 7928893 -242758961 - MIR SINE MIR -70 192 34 2504 198 98 100 chr2 7929088 7929142 -242758712 + L1MC3 LINE L1 6840 6893 -892 1684 154 0 27 chr2 7929142 7929448 -242758406 + AluJo SINE Alu 14 299 -13 2504 198 98 100 chr2 7929448 7929662 -242758192 + L1MC3 LINE L1 6893 7106 -679 282 200 0 17 chr2 7929662 7929722 -242758132 + MLT1C LTR MaLR 50 108 -459 2504 198 98 100 chr2 7929722 7930328 -242757526 + L1MC3 LINE L1 7106 7784 -1 411 314 59 12 chr2 7930365 7930534 -242757320 + MER5B DNA MER1_type 2 178 0 213 161 286 0 chr2 7931551 7931607 -242756247 - MIR SINE MIR -121 141 70 453 158 0 0 chr2 7931844 7931920 -242755934 + L1MB3 LINE L1 6101 6176 -7 380 123 14 0 chr2 7933653 7933726 -242754128 + (CA)n Simple_repeat Simple_repeat 1 74 0 192 270 139 74 chr2 7934676 7934891 -242752963 + L2 LINE L2 2437 2665 -649 431 228 18 78 chr2 7935254 7935421 -242752433 + MIR SINE MIR 96 252 -10 2238 113 0 0 chr2 7935615 7935916 -242751938 - AluSq SINE Alu -8 305 5 235 308 0 0 chr2 7936399 7936575 -242751279 + GA-rich Low_complexity Low_complexity 1 176 0 2899 206 113 10 chr2 7936591 7937305 -242750549 + Charlie1a DNA MER1_type 109 896 -559 289 179 0 36 chr2 7937787 7937871 -242749983 - L1MA7 LINE L1 -147 6144 6064 850 105 15 0 chr2 7937871 7937997 -242749857 + L1MA7 LINE L1 6157 6291 0 733 220 77 0 chr2 7938372 7938554 -242749300 + MLT1C LTR MaLR 270 465 -2 406 293 0 0 chr2 7938568 7938667 -242749187 - MIR SINE MIR -107 155 57 255 301 221 15 chr2 7938912 7939111 -242748743 + MIR SINE MIR 22 261 -1 180 380 60 0 chr2 7940896 7940996 -242746858 - MIR SINE MIR -59 203 98 299 309 131 36 chr2 7941130 7941382 -242746472 - L3b LINE CR1 -164 1419 1144 236 306 13 19 chr2 7943411 7943568 -242744286 + CT-rich Low_complexity Low_complexity 2 157 0 250 311 68 0 chr2 7945914 7946017 -242741837 - L2 LINE L2 -214 3058 2949 195 152 0 0 chr2 7946492 7946525 -242741329 - MIR SINE MIR -117 145 113 181 277 15 0 chr2 7947587 7947652 -242740202 + L2 LINE L2 2703 2768 -546 495 243 97 5 chr2 7947666 7947851 -242740003 - MIR SINE MIR -15 247 46 348 254 107 57 chr2 7949642 7949819 -242738035 - MIR SINE MIR -55 207 22 363 195 13 0 chr2 7950952 7951029 -242736825 + MIR SINE MIR 66 143 -119 548 208 104 69 chr2 7951582 7951755 -242736099 + MER63A DNA MER1_type 3 181 -29 456 221 82 76 chr2 7951893 7952051 -242735803 + MIR SINE MIR 17 175 -87 304 346 121 27 chr2 7952131 7953107 -242734747 + L2 LINE L2 1675 2742 -572 411 258 93 7 chr2 7953551 7953702 -242734152 - MER20B DNA MER1_type -604 179 16 338 273 99 16 chr2 7953710 7953831 -242734023 + L2 LINE L2 3142 3272 0 2071 158 92 8 chr2 7954778 7955171 -242732683 + MSTB LTR MaLR 1 426 0 916 278 14 0 chr2 7955365 7955588 -242732266 - MIR SINE MIR -25 237 12 860 273 96 35 chr2 7955603 7956095 -242731759 - MLT1F1 LTR MaLR 0 567 1 3689 217 30 30 chr2 7958044 7958274 -242729580 - Charlie1 DNA MER1_type 0 2761 2532 2246 101 0 3 chr2 7958274 7958582 -242729272 - AluSx SINE Alu -1 311 5 3689 217 30 30 chr2 7958582 7959296 -242728558 - Charlie1 DNA MER1_type -228 2533 1817 397 253 37 34 chr2 7959808 7959958 -242727896 + MIR3 SINE MIR 21 172 -36 2446 208 50 11 chr2 7960275 7960833 -242727021 + MLT1G LTR MaLR 11 590 0 574 321 102 56 chr2 7960849 7961838 -242726016 + L1ME2 LINE L1 4954 7750 -211 322 269 21 78 chr2 7962179 7962320 -242725534 + MER69A DNA AcHobo 28 160 -17 1770 271 39 58 chr2 7962992 7963711 -242724143 + L1M3c LINE L1 1 705 -5436 646 207 8 32 chr2 7963707 7963945 -242723909 + L1M3c LINE L1 1341 1661 -4550 * 464 177 0 0 chr2 7963946 7964025 -242723829 - Tigger5 DNA MER2_type 0 2323 2245 * 1212 211 4 22 chr2 7964019 7964251 -242723603 - Tigger5 DNA MER2_type -2095 228 1 1541 263 99 9 chr2 7964256 7964665 -242723189 + L1M4c LINE L1 1436 1807 -4575 1988 125 0 0 chr2 7964665 7964978 -242722876 - AluSg SINE Alu 0 313 1 1541 263 99 9 chr2 7964978 7965747 -242722107 + L1M4c LINE L1 1807 2760 -3622 1564 104 5 0 chr2 7965747 7965959 -242721895 - AluSq SINE Alu -19 294 82 1541 263 99 9 chr2 7965959 7966078 -242721776 + L1M4c LINE L1 2760 2867 -3515 1946 167 48 17 chr2 7966078 7966285 -242721569 + L1MA9 LINE L1 5105 5304 -1008 7833 21 0 0 chr2 7966285 7967205 -242720649 - L1PA4 LINE L1 -11 6144 5224 1946 167 48 17 chr2 7967205 7967789 -242720065 + L1MA9 LINE L1 5304 6136 -176 1946 139 52 12 chr2 7967789 7968134 -242719720 + L1MA9 LINE L1 5954 6312 0 1946 167 48 17 chr2 7968134 7968317 -242719537 + L1MA9 LINE L1 6136 6312 0 2268 84 0 7 chr2 7968416 7968714 -242719140 - AluY SINE Alu -15 296 1 594 264 6 12 chr2 7968739 7968902 -242718952 + L1MA10 LINE L1 6159 6320 -14 626 315 56 24 chr2 7970025 7970435 -242717419 + L1ME4a LINE L1 5699 6121 0 220 315 33 22 chr2 7972675 7972767 -242715087 - MIR SINE MIR -82 180 88 385 210 217 7 chr2 7972994 7973137 -242714717 - MER5A DNA MER1_type -10 179 7 224 346 13 0 chr2 7973358 7973436 -242714418 + L2 LINE L2 3227 3305 -8 1964 192 32 24 chr2 7973731 7974142 -242713712 + MLT2D LTR ERVL 1 414 0 210 233 0 0 chr2 7974493 7974553 -242713301 + GA-rich Low_complexity Low_complexity 2 61 0 307 70 0 0 chr2 7976708 7976751 -242711103 - AluSp/q SINE Alu -8 295 253 205 286 223 0 chr2 7977203 7977315 -242710539 + L2 LINE L2 3136 3272 0 289 250 0 0 chr2 7977512 7977572 -242710282 + L2 LINE L2 2999 3058 -214 194 207 17 0 chr2 7977699 7977757 -242710097 + (CA)n Simple_repeat Simple_repeat 1 59 0 184 319 28 14 chr2 7977961 7978033 -242709821 - MIR SINE MIR -169 93 21 556 281 22 43 chr2 7978246 7978431 -242709423 + MIR SINE MIR 23 203 -59 331 284 99 23 chr2 7978496 7978673 -242709181 - MIR SINE MIR -28 234 43 293 235 113 17 chr2 7979428 7979543 -242708311 - MIR3 SINE MIR -78 130 5 429 242 32 20 chr2 7981255 7981600 -242706254 + (CA)n Simple_repeat Simple_repeat 1 349 0 373 274 0 11 chr2 7981895 7981990 -242705864 + MIR SINE MIR 58 151 -57 380 325 29 10 chr2 7982384 7982590 -242705264 - L1MC4a LINE L1 -1929 5879 5670 269 324 58 29 chr2 7982923 7983096 -242704758 + MIR SINE MIR 33 210 -52 297 190 113 64 chr2 7983662 7983802 -242704052 + MIR SINE MIR 41 192 -68 387 274 46 4 chr2 7985263 7985422 -242702432 - MIR3 SINE MIR 0 262 51 424 239 8 51 chr2 7985433 7985550 -242702304 + L2 LINE L2 3201 3312 -1 293 315 46 39 chr2 7987198 7987328 -242700526 + MIR3 SINE MIR 78 208 0 202 307 0 45 chr2 7988464 7988552 -242699302 - L2 LINE L2 -10 3262 3179 486 289 13 33 chr2 7989851 7990003 -242697851 + MIR SINE MIR 28 176 -86 615 259 7 0 chr2 7990079 7990214 -242697640 + MIR SINE MIR 16 151 -111 427 209 51 82 chr2 7990215 7990373 -242697481 + L1MB4 LINE L1 6022 6174 -6 338 232 11 11 chr2 7990364 7990459 -242697395 + L1MB8 LINE L1 6078 6172 -6 * 373 256 0 60 chr2 7990473 7990606 -242697248 + MIR SINE MIR 137 261 -1 377 349 23 11 chr2 7990619 7990721 -242697133 - MIR SINE MIR -60 202 96 2268 47 34 24 chr2 7990721 7991018 -242696836 - AluY SINE Alu -11 300 1 377 349 23 11 chr2 7991018 7991090 -242696764 - MIR SINE MIR -166 96 26 235 280 178 0 chr2 7993137 7993244 -242694610 - MIR SINE MIR -91 171 46 340 319 60 0 chr2 7993635 7993751 -242694103 - MIR SINE MIR -111 151 29 2233 97 7 0 chr2 7994357 7994655 -242693199 + AluSc SINE Alu 1 300 -9 189 192 14 27 chr2 7994689 7994762 -242693092 + (TA)n Simple_repeat Simple_repeat 1 72 0 242 137 59 0 chr2 7994776 7994827 -242693027 + G-rich Low_complexity Low_complexity 3 56 0 769 97 0 82 chr2 7994828 7995024 -242692830 + (GGGGA)n Simple_repeat Simple_repeat 1 180 0 378 123 66 8 chr2 7995134 7995256 -242692598 + (TG)n Simple_repeat Simple_repeat 1 129 0 203 149 0 21 chr2 7995310 7995357 -242692497 + (TG)n Simple_repeat Simple_repeat 1 46 0 215 305 48 9 chr2 7995750 7995855 -242691999 + MIR SINE MIR 20 128 -134 2212 114 0 0 chr2 7996312 7996618 -242691236 + AluSx SINE Alu 1 306 -6 237 346 31 8 chr2 7998996 7999126 -242688728 + L1ME4a LINE L1 5518 5650 -2158 2581 122 32 30 chr2 7999127 7999562 -242688292 + L1PA10 LINE L1 5732 6167 -1 317 360 48 0 chr2 7999563 7999688 -242688166 + L1ME4a LINE L1 5726 5856 -265 393 250 92 0 chr2 7999928 8000124 -242687730 + L1ME4a LINE L1 5728 5941 -180 24 67 0 0 chr2 8000124 8000169 -242687685 + AT_rich Low_complexity Low_complexity 1 45 0 1887 188 37 39 chr2 8000238 8000843 -242687011 + L1MB7 LINE L1 5015 5674 -510 2477 191 23 29 chr2 8001294 8001381 -242686473 + L1MB7 LINE L1 5652 5738 -446 1967 133 3 7 chr2 8001381 8001690 -242686164 + AluSx SINE Alu 1 308 -4 2477 191 23 29 chr2 8001690 8002119 -242685735 + L1MB7 LINE L1 5738 6165 -19 6105 147 78 31 chr2 8002142 8002474 -242685380 + Tigger3b DNA MER2_type 1 316 -2712 2234 94 0 0 chr2 8002474 8002773 -242685081 - AluSx SINE Alu -13 299 1 6105 147 78 31 chr2 8002773 8003283 -242684571 + Tigger3b DNA MER2_type 316 917 -2111 236 30 30 0 chr2 8003283 8003316 -242684538 + (CTCA)n Simple_repeat Simple_repeat 1 34 0 6105 147 78 31 chr2 8003316 8003646 -242684208 + Tigger3b DNA MER2_type 917 1230 -1 283 352 28 28 chr2 8004609 8004754 -242683100 - L3 LINE CR1 -198 1379 1235 290 301 60 15 chr2 8005246 8005379 -242682475 + MIR3 SINE MIR 58 196 -12 278 311 73 34 chr2 8006505 8006617 -242681237 - MIR SINE MIR -57 205 82 1157 254 88 31 chr2 8006617 8006971 -242680883 - MLT1A2 LTR MaLR 0 374 1 278 311 73 34 chr2 8006971 8007035 -242680819 - MIR SINE MIR -180 82 22 395 36 36 0 chr2 8007036 8007092 -242680762 + (CTACT)n Simple_repeat Simple_repeat 4 61 0 187 339 71 24 chr2 8008451 8008578 -242679276 - MIR SINE MIR -27 235 103 2610 113 6 6 chr2 8008587 8008951 -242678903 - THE1B LTR MaLR 0 364 1 250 307 39 31 chr2 8009786 8009913 -242677941 - MIR3 SINE MIR -16 192 65 1810 189 16 18 chr2 8009942 8010120 -242677734 + MLT1B LTR MaLR 1 178 -212 1627 192 0 26 chr2 8010120 8010432 -242677422 + AluJb SINE Alu 1 304 -8 1810 189 16 18 chr2 8010432 8010634 -242677220 + MLT1B LTR MaLR 178 380 -10 2172 109 0 7 chr2 8011048 8011350 -242676504 - AluSq SINE Alu -13 300 1 542 292 120 5 chr2 8011540 8011749 -242676105 + MIR SINE MIR 5 237 -25 559 266 67 37 chr2 8012339 8012665 -242675189 + MLT1J2 LTR MaLR 64 403 -6 184 219 205 26 chr2 8013003 8013154 -242674700 - L2 LINE L2 -1224 2090 1913 283 342 37 62 chr2 8015804 8015905 -242671949 + HAL1 LINE L1 8 110 -2397 779 228 59 30 chr2 8015905 8016107 -242671747 - MER3 DNA MER1_type -1 208 1 283 342 37 62 chr2 8016107 8016248 -242671606 + HAL1 LINE L1 110 244 -2263 299 312 23 69 chr2 8016251 8016424 -242671430 - MER115 DNA AcHobo -4 689 525 1205 216 24 80 chr2 8016426 8016838 -242671016 - MLT1B LTR MaLR 0 390 2 1055 251 129 34 chr2 8016840 8017219 -242670635 - MER115 DNA AcHobo -168 525 111 229 341 12 0 chr2 8017284 8017369 -242670485 + HAL1 LINE L1 235 320 -2187 1946 267 66 22 chr2 8017399 8017983 -242669871 + HAL1 LINE L1 418 974 -1533 252 0 0 0 chr2 8017983 8018011 -242669843 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1946 267 66 22 chr2 8018011 8018655 -242669199 + HAL1 LINE L1 974 1739 -768 447 35 0 0 chr2 8018741 8018798 -242669056 + (TG)n Simple_repeat Simple_repeat 2 58 0 287 167 0 0 chr2 8018812 8018854 -242669000 - MER41B-int LTR ERV1 -5904 42 1 962 105 13 7 chr2 8018854 8019007 -242668847 - MER41B LTR ERV1 0 635 482 1741 108 105 21 chr2 8019544 8019830 -242668024 + AluSx SINE Alu 3 312 0 208 369 35 35 chr2 8020062 8020203 -242667651 - MIR3 SINE MIR -16 192 52 289 250 117 17 chr2 8020331 8020451 -242667403 + L2 LINE L2 1303 1434 -1880 321 47 0 0 chr2 8020657 8020700 -242667154 + (CA)n Simple_repeat Simple_repeat 2 44 0 324 261 82 89 chr2 8021206 8021486 -242666368 + L2 LINE L2 2839 3116 -156 337 282 85 82 chr2 8023154 8023448 -242664406 - L2 LINE L2 -108 3205 2911 274 209 14 0 chr2 8024538 8024677 -242663177 + (TG)n Simple_repeat Simple_repeat 1 141 0 319 165 0 21 chr2 8024744 8024841 -242663013 + (TG)n Simple_repeat Simple_repeat 1 95 0 237 65 0 0 chr2 8024842 8024873 -242662981 + (GGGAGA)n Simple_repeat Simple_repeat 3 33 0 914 160 0 41 chr2 8026733 8026902 -242660952 + AluJb SINE Alu 135 296 -16 448 292 39 28 chr2 8027433 8027588 -242660266 + MIR SINE MIR 15 171 -57 1107 160 62 29 chr2 8029807 8030153 -242657701 - MLT1D LTR MaLR -103 402 1 274 261 23 11 chr2 8031256 8031344 -242656510 + MIR SINE MIR 58 146 -116 1301 218 92 23 chr2 8032561 8032997 -242654857 - MLT1C LTR MaLR 0 467 2 1947 160 7 0 chr2 8033240 8033533 -242654321 - AluJo SINE Alu -17 295 1 26 64 0 0 chr2 8033593 8033640 -242654214 + AT_rich Low_complexity Low_complexity 1 47 0 359 302 39 23 chr2 8033758 8033972 -242653882 + MIR SINE MIR 5 228 -34 226 165 92 0 chr2 8035472 8035581 -242652273 + (TA)n Simple_repeat Simple_repeat 2 120 0 436 213 24 6 chr2 8035584 8035753 -242652101 + GA-rich Low_complexity Low_complexity 1 172 0 1232 155 24 0 chr2 8038624 8038837 -242649017 + MER20 DNA MER1_type 1 218 -1 509 138 0 0 chr2 8041680 8041760 -242646094 - MLT2B1 LTR ERVL -440 80 1 324 247 21 21 chr2 8042018 8042111 -242645743 + MER115 DNA AcHobo 7 99 -594 1807 184 49 16 chr2 8042130 8042499 -242645355 + MLT1B LTR MaLR 2 382 -8 552 278 108 0 chr2 8042522 8042734 -242645120 + MER115 DNA AcHobo 132 366 -327 22 0 0 0 chr2 8043355 8043377 -242644477 + GC_rich Low_complexity Low_complexity 1 22 0 948 217 27 5 chr2 8043791 8044012 -242643842 + MER52C-int LTR ERV1 2501 2726 -2491 675 201 28 14 chr2 8044058 8044202 -242643652 + MER52C-int LTR ERV1 4545 4690 -1256 293 119 0 0 chr2 8044207 8044249 -242643605 + MER52C-int LTR ERV1 5976 6017 -1188 453 107 57 4 chr2 8044253 8044391 -242643463 + MER52C-int LTR ERV1 6892 7091 0 3560 187 171 19 chr2 8044934 8045865 -242641989 + MER52C LTR ERV1 49 1278 0 233 260 110 0 chr2 8046315 8046415 -242641439 + MLT1H1 LTR MaLR 30 140 -415 282 191 51 6 chr2 8046994 8047151 -242640703 + (TA)n Simple_repeat Simple_repeat 2 165 0 321 287 25 57 chr2 8047182 8047304 -242640550 + L1MC4 LINE L1 6586 6703 -1339 318 261 23 23 chr2 8047306 8047394 -242640460 + L1MCa LINE L1 1980 2067 -4359 186 200 42 21 chr2 8047394 8047489 -242640365 + (TA)n Simple_repeat Simple_repeat 1 97 0 327 318 24 0 chr2 8047494 8047579 -242640275 - L1MC4 LINE L1 -1340 6702 6616 306 315 0 22 chr2 8047612 8047704 -242640150 + L1MC4 LINE L1 6614 6703 -1339 220 221 16 49 chr2 8047704 8047826 -242640028 + (TATATG)n Simple_repeat Simple_repeat 6 123 0 304 253 69 35 chr2 8047826 8047913 -242639941 - L1MC4 LINE L1 -1339 6703 6614 240 209 60 0 chr2 8047914 8047981 -242639873 + (TATATG)n Simple_repeat Simple_repeat 1 71 0 216 0 0 0 chr2 8047981 8048005 -242639849 + (CA)n Simple_repeat Simple_repeat 1 24 0 646 163 42 95 chr2 8049075 8049219 -242638635 + MER96B DNA MER1_type? 1 134 -283 2773 115 29 2 chr2 8049219 8049663 -242638191 + L1PA16 LINE L1 5708 6163 -3 646 163 42 95 chr2 8049663 8049708 -242638146 + MER96B DNA MER1_type? 134 180 -237 1647 163 54 76 chr2 8049816 8050028 -242637826 - MSTB1 LTR MaLR 0 432 232 1970 157 3 0 chr2 8050028 8050328 -242637526 + AluJb SINE Alu 2 302 -10 1647 163 54 76 chr2 8050328 8050525 -242637329 - MSTB1 LTR MaLR -200 232 32 198 306 0 47 chr2 8052180 8052265 -242635589 + MIR SINE MIR 148 228 -34 1796 176 14 3 chr2 8052360 8052650 -242635204 + AluJo SINE Alu 1 293 -19 188 258 113 41 chr2 8052969 8053066 -242634788 - L3 LINE CR1 -106 1471 1368 1781 145 7 56 chr2 8054424 8054727 -242633127 + AluJo SINE Alu 1 288 -24 236 221 81 23 chr2 8054868 8054954 -242632900 - L2 LINE L2 0 3313 3223 207 69 0 0 chr2 8055003 8055032 -242632822 + (CCCCCA)n Simple_repeat Simple_repeat 4 32 0 629 197 55 0 chr2 8056339 8056466 -242631388 + FRAM SINE Alu 21 154 -22 183 350 57 0 chr2 8057578 8057701 -242630153 - MER5A DNA MER1_type -35 154 25 208 321 97 42 chr2 8057891 8058128 -242629726 - L2 LINE L2 -195 3077 2828 2426 82 0 0 chr2 8058457 8058749 -242629105 - AluSg SINE Alu -18 292 1 982 144 0 0 chr2 8059969 8060115 -242627739 - AluSg/x SINE Alu -8 302 157 225 296 12 25 chr2 8061060 8061141 -242626713 - MER5A DNA MER1_type 0 189 110 2014 117 23 47 chr2 8061142 8061526 -242626328 - THE1C LTR MaLR 0 375 1 190 291 46 106 chr2 8061557 8061708 -242626146 - MER5A DNA MER1_type -1 188 47 922 161 0 13 chr2 8062261 8062416 -242625438 + FRAM SINE Alu 24 176 0 2406 69 0 23 chr2 8062728 8063033 -242624821 + AluY SINE Alu 1 298 -13 1508 115 28 45 chr2 8063312 8063555 -242624299 + L1MB3 LINE L1 5892 6138 -45 1800 101 97 4 chr2 8063555 8063813 -242624041 + AluSg SINE Alu 1 282 -28 279 0 0 0 chr2 8063813 8063844 -242624010 + (CA)n Simple_repeat Simple_repeat 2 32 0 1508 115 28 45 chr2 8063844 8063887 -242623967 + L1MB3 LINE L1 6136 6174 -9 471 286 101 45 chr2 8064666 8065137 -242622717 - L1ME3A LINE L1 -217 5953 5450 1059 306 66 21 chr2 8065233 8065700 -242622154 + L2 LINE L2 2826 3313 0 1050 167 5 5 chr2 8065703 8066368 -242621486 + (TGGA)n Simple_repeat Simple_repeat 1 665 0 514 193 17 25 chr2 8067091 8067210 -242620644 + MLT1J1 LTR MaLR 3 120 -326 819 148 11 82 chr2 8067211 8067394 -242620460 + MER20 DNA MER1_type 1 170 -49 559 295 122 24 chr2 8067510 8067805 -242620049 + MLT1J2 LTR MaLR 113 436 -14 259 180 110 70 chr2 8068303 8068403 -242619451 - MER53 DNA DNA -84 105 2 329 273 123 27 chr2 8068405 8068592 -242619262 - MIR SINE MIR -13 249 45 277 376 23 23 chr2 8068932 8069105 -242618749 + MIR SINE MIR 18 190 -72 2005 145 16 10 chr2 8070008 8070139 -242617715 + AluJb SINE Alu 1 130 -182 1909 158 14 3 chr2 8070139 8070431 -242617423 + AluJb SINE Alu 1 295 -17 2005 145 16 10 chr2 8070431 8070602 -242617252 + AluJb SINE Alu 130 305 -7 332 248 101 48 chr2 8070889 8071083 -242616771 - MLT1G LTR MaLR -175 420 216 4144 189 81 69 chr2 8071085 8072631 -242615223 + L1MDa LINE L1 324 2126 -4414 1562 125 21 127 chr2 8072663 8073040 -242614814 + MER1B DNA MER1_type 1 337 0 441 249 71 24 chr2 8073157 8073326 -242614528 + MER5A DNA MER1_type 7 183 -6 232 309 0 64 chr2 8076397 8076507 -242611347 + C-rich Low_complexity Low_complexity 3 105 0 267 31 0 0 chr2 8076761 8076793 -242611061 + (CCG)n Simple_repeat Simple_repeat 2 33 0 399 297 0 14 chr2 8079428 8079573 -242608281 + C-rich Low_complexity Low_complexity 2 144 0 225 0 0 0 chr2 8080525 8080550 -242607304 + (A)n Simple_repeat Simple_repeat 1 25 0 23 0 0 0 chr2 8081881 8081904 -242605950 + AT_rich Low_complexity Low_complexity 1 23 0 529 243 101 106 chr2 8084118 8084622 -242603232 - L1 LINE L1 -1995 4151 3639 1897 121 29 0 chr2 8085093 8085373 -242602481 + AluJb SINE Alu 1 288 -24 26 30 0 0 chr2 8085374 8085407 -242602447 + AT_rich Low_complexity Low_complexity 1 33 0 1620 308 67 40 chr2 8085492 8086471 -242601383 + L1MEd LINE L1 112 1117 -5002 1747 134 10 23 chr2 8086605 8086904 -242600950 - AluJb SINE Alu -17 295 1 1965 277 71 13 chr2 8086916 8087664 -242600190 + L1MC4a LINE L1 5279 6069 -1739 1641 143 3 28 chr2 8087804 8088090 -242599764 + AluSx SINE Alu 1 279 -33 322 281 45 0 chr2 8088105 8088194 -242599660 - L1MC5 LINE L1 -861 7100 7008 961 290 86 28 chr2 8088292 8088836 -242599018 + L1MC4a LINE L1 6199 6774 -1034 333 259 46 15 chr2 8088864 8088995 -242598859 + L1MC5 LINE L1 6957 7091 -870 302 319 91 55 chr2 8089228 8089535 -242598319 + L1MC5 LINE L1 7249 7566 -395 243 0 0 0 chr2 8089549 8089576 -242598278 + (T)n Simple_repeat Simple_repeat 1 27 0 269 224 10 71 chr2 8089655 8089753 -242598101 + L1MC5 LINE L1 7711 7802 -159 359 309 95 8 chr2 8090907 8091033 -242596821 - L2 LINE L2 0 3272 3136 397 237 200 4 chr2 8091413 8091658 -242596196 + LTR50 LTR ERVL 502 794 -1 405 300 0 0 chr2 8091799 8091959 -242595895 + G-rich Low_complexity Low_complexity 1 160 0 315 142 122 0 chr2 8092060 8092208 -242595646 + (GGATG)n Simple_repeat Simple_repeat 2 167 0 311 164 41 0 chr2 8092211 8092284 -242595570 + GA-rich Low_complexity Low_complexity 1 76 0 1903 138 0 0 chr2 8092762 8093079 -242594775 + AluSx SINE Alu 1 317 0 694 301 109 12 chr2 8093402 8093731 -242594123 - L1MC/D LINE L1 -2073 5735 5375 222 62 0 0 chr2 8093745 8093777 -242594077 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 273 237 30 69 chr2 8094226 8094357 -242593497 - L1MC4a LINE L1 -1634 6174 6049 768 197 72 0 chr2 8094407 8094559 -242593295 + AluJb SINE Alu 136 298 -14 210 304 124 19 chr2 8094711 8094872 -242592982 + L3 LINE CR1 1320 1497 -80 1506 108 0 0 chr2 8095516 8095719 -242592135 + AluSx SINE Alu 1 203 -109 1087 172 10 25 chr2 8095720 8095924 -242591930 + MLT1B LTR MaLR 189 389 -1 237 65 0 0 chr2 8096087 8096118 -242591736 + (CA)n Simple_repeat Simple_repeat 1 31 0 22 56 0 0 chr2 8096975 8097011 -242590843 + AT_rich Low_complexity Low_complexity 1 36 0 328 104 30 0 chr2 8098950 8099017 -242588837 + (TG)n Simple_repeat Simple_repeat 1 69 0 328 128 46 18 chr2 8099064 8099173 -242588681 + (TG)n Simple_repeat Simple_repeat 1 112 0 436 122 68 7 chr2 8099200 8099347 -242588507 + (TG)n Simple_repeat Simple_repeat 1 156 0 336 278 61 26 chr2 8099547 8099662 -242588192 - L2 LINE L2 -474 2840 2722 534 113 0 0 chr2 8099869 8099949 -242587905 + MADE1 DNA Mariner 1 80 0 1881 113 72 0 chr2 8100359 8100650 -242587204 - AluSx SINE Alu 0 312 1 2269 97 3 0 chr2 8100930 8101238 -242586616 + AluSp SINE Alu 1 309 -4 1651 148 56 14 chr2 8101306 8101590 -242586264 + AluJo SINE Alu 1 296 -16 1587 223 122 26 chr2 8102248 8102709 -242585145 + MLT1D LTR MaLR 1 505 0 1584 195 127 3 chr2 8103131 8103286 -242584568 - MSTD LTR MaLR -2 394 260 2204 113 159 5 chr2 8103286 8103657 -242584197 + MSTA LTR MaLR 1 428 0 1584 195 127 3 chr2 8103657 8103839 -242584015 - MSTD LTR MaLR -136 260 15 358 283 30 0 chr2 8103886 8103985 -242583869 + L2 LINE L2 3212 3313 0 274 316 29 76 chr2 8103985 8104156 -242583698 + L3 LINE CR1 1404 1566 -11 450 0 0 0 chr2 8104591 8104641 -242583213 + (TG)n Simple_repeat Simple_repeat 2 51 0 572 129 0 86 chr2 8104655 8104771 -242583083 - AluJ SINE Alu 0 312 207 927 136 0 7 chr2 8104771 8104911 -242582943 - AluJ SINE Alu -169 143 5 436 174 250 45 chr2 8104920 8105052 -242582802 - MLT1F LTR MaLR -383 159 1 216 176 44 0 chr2 8105671 8105739 -242582115 + (TTATA)n Simple_repeat Simple_repeat 5 75 0 2173 53 0 0 chr2 8105832 8106097 -242581757 - AluY SINE Alu -16 295 31 395 271 68 23 chr2 8107540 8107671 -242580183 + MLT1G3 LTR MaLR 26 162 -433 1678 148 5 77 chr2 8107671 8108043 -242579811 - MER4A LTR ERV1 0 664 261 640 128 20 10 chr2 8108040 8108142 -242579712 - MER4A LTR ERV1 -561 103 1 * 561 266 80 73 chr2 8108154 8108572 -242579282 + MLT1G3 LTR MaLR 92 560 -7 1987 204 99 159 chr2 8108620 8108697 -242579157 - Charlie2a DNA MER1_type -6 2856 2776 5096 84 0 15 chr2 8108697 8109367 -242578487 - PABL_A LTR ERV1 0 660 1 1987 204 99 159 chr2 8109367 8110569 -242577285 - Charlie2a DNA MER1_type -86 2776 1673 1939 122 6 34 chr2 8110569 8110889 -242576965 + AluSx SINE Alu 1 311 -1 1987 204 99 159 chr2 8110889 8111066 -242576788 - Charlie2a DNA MER1_type -1189 1673 1487 460 282 222 0 chr2 8111189 8111405 -242576449 - Charlie2a DNA MER1_type -2239 623 360 896 301 132 36 chr2 8111826 8112654 -242575200 - HAL1 LINE L1 0 2507 1601 2549 171 11 18 chr2 8112673 8113128 -242574726 + LOR1b LTR ERV1 10 461 0 2126 265 85 75 chr2 8113129 8113248 -242574606 - HAL1 LINE L1 -913 1594 1478 2007 123 0 3 chr2 8113248 8113563 -242574291 - AluSx SINE Alu 0 314 1 2126 265 85 75 chr2 8113563 8114932 -242572922 - HAL1 LINE L1 -1029 1478 90 415 256 76 33 chr2 8117713 8117924 -242569930 + L1ME3A LINE L1 5727 5946 -224 2316 65 3 0 chr2 8117939 8118230 -242569624 + AluSg SINE Alu 5 296 -14 2374 116 42 11 chr2 8118289 8118642 -242569212 + THE1B LTR MaLR 1 364 0 2019 105 0 36 chr2 8118698 8119002 -242568852 - AluSx SINE Alu -19 293 1 1498 244 31 0 chr2 8119089 8119449 -242568405 - ERVL LTR ERVL -4525 1239 869 1374 241 26 42 chr2 8119545 8119969 -242567885 - MLT2B1 LTR ERVL -103 417 1 1658 156 42 10 chr2 8120054 8120343 -242567511 + AluJo SINE Alu 1 298 -14 23 54 0 0 chr2 8120742 8120779 -242567075 + AT_rich Low_complexity Low_complexity 1 37 0 2637 101 11 16 chr2 8121008 8121385 -242566469 + THE1C LTR MaLR 1 375 0 993 226 68 87 chr2 8121874 8122289 -242565565 - L1M4 LINE L1 -1022 5124 4718 36 40 0 0 chr2 8122390 8122440 -242565414 + AT_rich Low_complexity Low_complexity 1 50 0 295 250 24 12 chr2 8122541 8122625 -242565229 + L2 LINE L2 1471 1555 -1759 2671 170 19 46 chr2 8122703 8123187 -242564667 + MLT2B2 LTR ERVL 1 472 -43 201 74 0 0 chr2 8123187 8123214 -242564640 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 2671 170 19 46 chr2 8123214 8123246 -242564608 + MLT2B2 LTR ERVL 472 503 -12 21 57 0 0 chr2 8123337 8123372 -242564482 + AT_rich Low_complexity Low_complexity 1 35 0 1632 168 0 14 chr2 8123378 8123669 -242564185 - AluJo SINE Alu -15 297 11 1109 123 12 0 chr2 8124432 8124602 -242563252 + AluSg/x SINE Alu 135 306 -4 193 329 13 26 chr2 8124773 8124849 -242563005 + MIR3 SINE MIR 125 199 -9 351 44 0 0 chr2 8125307 8125352 -242562502 + (CA)n Simple_repeat Simple_repeat 2 46 0 277 343 73 32 chr2 8125721 8125908 -242561946 + MIR SINE MIR 14 206 -56 * 567 291 35 0 chr2 8125907 8126048 -242561806 + MIR SINE MIR 97 242 -20 24 53 0 0 chr2 8126247 8126285 -242561569 + AT_rich Low_complexity Low_complexity 1 38 0 225 65 0 0 chr2 8126698 8126729 -242561125 + (ATG)n Simple_repeat Simple_repeat 2 32 0 857 226 106 10 chr2 8126822 8127030 -242560824 + MIR SINE MIR 17 244 -18 308 252 92 25 chr2 8127273 8127392 -242560462 - MER104 DNA Tc2 -49 131 5 22 0 0 0 chr2 8127722 8127744 -242560110 + AT_rich Low_complexity Low_complexity 1 22 0 521 176 0 11 chr2 8127866 8127957 -242559897 + FRAM SINE Alu 38 127 -49 403 195 172 94 chr2 8128218 8128474 -242559380 + MLT1J2 LTR MaLR 2 277 -173 293 248 77 3 chr2 8128522 8128621 -242559233 + MLT1J2 LTR MaLR 345 444 -2 876 131 0 8 chr2 8129068 8129198 -242558656 - FLAM_A SINE Alu -4 129 1 1994 119 3 0 chr2 8129377 8129662 -242558192 - AluSx SINE Alu -24 288 3 1773 161 0 17 chr2 8129750 8130048 -242557806 - AluJb SINE Alu -19 293 1 1627 192 77 0 chr2 8131648 8131971 -242555883 - MER7A DNA MER2_type 0 346 1 1645 132 73 11 chr2 8133177 8133481 -242554373 + AluJo SINE Alu 1 312 0 21 0 0 0 chr2 8137111 8137132 -242550722 + AT_rich Low_complexity Low_complexity 1 21 0 800 197 8 0 chr2 8137380 8137512 -242550342 - FLAM_A SINE Alu 0 133 1 246 255 88 74 chr2 8138241 8138457 -242549397 + L2 LINE L2 3030 3248 -65 1134 192 148 36 chr2 8139132 8139491 -242548363 - MER31B LTR ERV1 -43 423 25 24 32 0 0 chr2 8139631 8139662 -242548192 + AT_rich Low_complexity Low_complexity 1 31 0 2177 121 0 3 chr2 8140366 8140673 -242547181 + AluSx SINE Alu 1 306 -6 483 145 38 0 chr2 8143010 8143106 -242544748 - L1MB8 LINE L1 -275 5899 5798 3564 206 75 11 chr2 8143211 8144065 -242543789 + L1MC4a LINE L1 6900 7808 0 1946 128 6 55 chr2 8146402 8146730 -242541124 + AluSx SINE Alu 1 312 0 1064 181 108 23 chr2 8147245 8147505 -242540349 - AluJo SINE Alu -20 292 11 310 239 163 0 chr2 8147845 8147937 -242539917 + L2 LINE L2 3203 3309 -4 238 247 161 0 chr2 8148571 8148664 -242539190 - MIR SINE MIR -76 186 79 217 195 35 23 chr2 8149170 8149257 -242538597 + (TTATA)n Simple_repeat Simple_repeat 5 92 0 1071 269 143 18 chr2 8150018 8150416 -242537438 - L2 LINE L2 -18 3295 2848 3373 135 67 24 chr2 8150759 8151344 -242536510 + MER4B LTR ERV1 1 610 0 459 33 33 0 chr2 8152354 8152414 -242535440 + AluY SINE Alu 2 63 -247 24 32 0 0 chr2 8152515 8152546 -242535308 + AT_rich Low_complexity Low_complexity 1 31 0 264 319 61 25 chr2 8153758 8153921 -242533933 + L2 LINE L2 2905 3073 -240 1778 286 161 21 chr2 8154235 8155263 -242532591 + L2 LINE L2 191 1362 -1952 278 271 84 60 chr2 8156302 8156553 -242531301 - L2 LINE L2 -920 2394 2138 254 309 40 46 chr2 8156553 8156705 -242531149 + L2 LINE L2 3132 3282 -31 182 233 209 23 chr2 8156736 8156865 -242530989 - L2 LINE L2 -1232 2082 1930 220 186 0 93 chr2 8156995 8157092 -242530762 + GA-rich Low_complexity Low_complexity 5 92 0 2288 92 17 0 chr2 8158466 8158758 -242529096 + AluSx SINE Alu 1 297 -15 316 180 0 0 chr2 8159282 8159343 -242528511 - L1ME4a LINE L1 -1 6120 6060 21 0 0 0 chr2 8159394 8159415 -242528439 + AT_rich Low_complexity Low_complexity 1 21 0 2101 141 0 0 chr2 8159415 8159721 -242528133 + AluSx SINE Alu 1 306 -6 1100 169 0 0 chr2 8160252 8160435 -242527419 - AluJb SINE Alu -10 302 120 410 289 86 119 chr2 8160746 8161720 -242526134 + L2 LINE L2 880 1821 -1493 2098 104 0 0 chr2 8161753 8162058 -242525796 + AluSx SINE Alu 5 309 0 209 262 12 83 chr2 8162082 8162166 -242525688 + L2 LINE L2 1938 2015 -1299 892 226 34 26 chr2 8162176 8162410 -242525444 + MER106A DNA MER1_type 1 236 0 490 265 149 16 chr2 8162412 8162733 -242525121 - L1MC5 LINE L1 -99 7862 7499 1671 121 148 4 chr2 8163051 8163307 -242524547 - AluJb SINE Alu -5 297 5 495 353 154 12 chr2 8163386 8163990 -242523864 + L2 LINE L2 2167 2856 -458 344 348 167 30 chr2 8164019 8164324 -242523530 + L2 LINE L2 2926 3272 0 2136 86 17 7 chr2 8165986 8166276 -242521578 + AluSq SINE Alu 1 293 -20 352 43 0 0 chr2 8166460 8166507 -242521347 - AluY SINE Alu -3 297 251 2365 86 0 10 chr2 8166573 8166875 -242520979 - AluSq SINE Alu -14 299 1 231 133 0 0 chr2 8166914 8166959 -242520895 + (T)n Simple_repeat Simple_repeat 1 45 0 198 0 0 0 chr2 8166988 8167010 -242520844 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 21 0 0 0 chr2 8168312 8168333 -242519521 + AT_rich Low_complexity Low_complexity 1 21 0 188 132 151 38 chr2 8168764 8168817 -242519037 - MIR SINE MIR -24 238 180 21 0 0 0 chr2 8170913 8170934 -242516920 + AT_rich Low_complexity Low_complexity 1 21 0 2245 80 0 30 chr2 8170939 8171238 -242516616 + AluSg1 SINE Alu 1 290 -19 379 186 46 56 chr2 8171860 8171983 -242515871 + L1ME LINE L1 5479 5595 -571 230 248 113 68 chr2 8171991 8172124 -242515730 + L1MC4 LINE L1 7903 8041 -1 21 0 0 0 chr2 8174080 8174101 -242513753 + AT_rich Low_complexity Low_complexity 1 21 0 1315 172 0 5 chr2 8176044 8176265 -242511589 + AluJb SINE Alu 85 304 -8 447 290 189 64 chr2 8177387 8177638 -242510216 - L2 LINE L2 -337 2977 2759 1902 124 57 0 chr2 8177638 8177921 -242509933 - AluJb SINE Alu -13 299 1 447 290 189 64 chr2 8177921 8178669 -242509185 - L2 LINE L2 -555 2759 1853 25 0 0 0 chr2 8181923 8181948 -242505906 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr2 8182761 8182784 -242505070 + AT_rich Low_complexity Low_complexity 1 23 0 208 379 32 0 chr2 8183284 8183379 -242504475 - MIR SINE MIR -69 139 42 252 0 0 0 chr2 8184303 8184331 -242503523 + (CA)n Simple_repeat Simple_repeat 2 29 0 971 108 0 0 chr2 8184537 8184667 -242503187 - AluSg/x SINE Alu -4 308 179 292 327 9 47 chr2 8184729 8184836 -242503018 - MIR SINE MIR -82 126 24 1468 163 21 21 chr2 8185368 8185650 -242502204 - AluJo SINE Alu -30 282 1 1838 143 17 24 chr2 8187306 8187600 -242500254 - AluJb SINE Alu -20 292 1 1705 163 0 14 chr2 8188609 8188885 -242498969 - AluJo SINE Alu -40 272 1 257 339 46 9 chr2 8189078 8189187 -242498667 + L2 LINE L2 3190 3302 -11 21 36 0 0 chr2 8189204 8189232 -242498622 + AT_rich Low_complexity Low_complexity 1 28 0 474 312 75 0 chr2 8191045 8191231 -242496623 + MLT1J LTR MaLR 3 202 -309 452 269 35 29 chr2 8191222 8191393 -242496461 + MLT1J LTR MaLR 340 511 0 * 28 0 0 0 chr2 8191570 8191598 -242496256 + AT_rich Low_complexity Low_complexity 1 28 0 223 304 106 43 chr2 8191791 8191952 -242495902 - MIR SINE MIR -46 216 46 818 266 71 9 chr2 8192555 8192781 -242495073 + MIR SINE MIR 23 262 0 244 200 29 29 chr2 8192971 8193041 -242494813 + GA-rich Low_complexity Low_complexity 4 73 0 771 281 154 7 chr2 8193817 8194318 -242493536 - L2 LINE L2 0 3313 2734 25 31 0 0 chr2 8195629 8195661 -242492193 + AT_rich Low_complexity Low_complexity 1 32 0 450 261 69 0 chr2 8195974 8196104 -242491750 - L2 LINE L2 -15 3298 3160 354 282 115 6 chr2 8196143 8196317 -242491537 + L1ME LINE L1 5586 5778 -343 1647 112 0 60 chr2 8196397 8196647 -242491207 + AluSq SINE Alu 1 235 -78 225 0 0 0 chr2 8196654 8196679 -242491175 + (A)n Simple_repeat Simple_repeat 1 25 0 265 155 0 71 chr2 8196718 8196802 -242491052 + L1ME4a LINE L1 6044 6121 0 2966 136 39 0 chr2 8197449 8197965 -242489889 + Tigger4(Zombi) DNA MER2_type 2196 2731 0 2768 182 56 2 chr2 8198349 8198882 -242488972 + MER68 LTR ERV1 1 562 0 795 67 55 0 chr2 8200047 8200178 -242487676 - LTR12 LTR ERV1 -21 693 270 4644 107 44 92 chr2 8200179 8201156 -242486698 - pTR5 LTR ERV1 -1 2605 1520 3162 95 4 32 chr2 8201153 8201370 -242486484 - HERV9 LTR ERV1 -164 8235 8013 * 2511 62 0 7 chr2 8201370 8201674 -242486180 + AluY SINE Alu 1 302 -9 3162 95 4 32 chr2 8201674 8201950 -242485904 - HERV9 LTR ERV1 -386 8013 7756 1818 182 154 50 chr2 8201944 8202742 -242485112 - Harlequin LTR ERV1 -5176 1720 840 * 27955 90 5 8 chr2 8202743 8207763 -242480091 - Harlequin LTR ERV1 -1994 444 43 4787 80 50 134 chr2 8207763 8208665 -242479189 - LTR12 LTR ERV1 0 826 1 1944 133 32 19 chr2 8209380 8209688 -242478166 - AluSx SINE Alu 0 312 1 2153 143 3 0 chr2 8209718 8210025 -242477829 - AluJb SINE Alu -4 308 1 407 329 62 21 chr2 8210025 8210265 -242477589 - L1M4 LINE L1 -1599 4547 4298 972 73 0 7 chr2 8210875 8211011 -242476843 + L1PA6 LINE L1 5799 5933 -221 207 114 0 0 chr2 8213871 8213906 -242473948 + (T)n Simple_repeat Simple_repeat 1 35 0 1747 112 4 0 chr2 8214392 8214624 -242473230 - AluSx SINE Alu -79 233 1 1568 196 18 3 chr2 8214650 8214936 -242472918 - AluJb SINE Alu -22 290 1 24 0 0 0 chr2 8214936 8214960 -242472894 + AT_rich Low_complexity Low_complexity 1 24 0 249 250 33 43 chr2 8215159 8215251 -242472603 - MIR SINE MIR -123 139 49 291 200 0 0 chr2 8215618 8215673 -242472181 - MER116 DNA Mariner -9 71 17 734 227 76 23 chr2 8215759 8216023 -242471831 + L1ME1 LINE L1 5723 6000 -166 552 228 20 0 chr2 8216054 8216203 -242471651 + L1MA10 LINE L1 6181 6332 -2 21 0 0 0 chr2 8216607 8216628 -242471226 + AT_rich Low_complexity Low_complexity 1 21 0 473 320 47 78 chr2 8217813 8218132 -242469722 + L2 LINE L2 2963 3271 -1 3401 219 58 12 chr2 8218246 8219114 -242468740 - L1M4 LINE L1 -1136 5010 4093 1576 196 38 35 chr2 8219114 8219487 -242468367 - MLT1A2 LTR MaLR 0 374 1 3401 219 58 12 chr2 8219487 8219568 -242468286 - L1M4 LINE L1 -2053 4093 4017 2330 101 0 0 chr2 8220477 8220783 -242467071 - AluSq SINE Alu -7 306 1 981 230 4 4 chr2 8221093 8221371 -242466483 - L1M4 LINE L1 -2909 3237 2960 403 272 99 8 chr2 8222441 8222628 -242465226 - MIR SINE MIR -19 243 38 2520 67 0 6 chr2 8225076 8225388 -242462466 + AluY SINE Alu 1 310 -1 285 245 38 57 chr2 8225880 8225902 -242461952 + MIR SINE MIR 159 180 -82 1252 124 129 0 chr2 8225902 8226111 -242461743 - MER46A DNA MER2_type 0 236 1 285 245 38 57 chr2 8226111 8226194 -242461660 + MIR SINE MIR 180 262 0 204 220 40 0 chr2 8226202 8226252 -242461602 + L2 LINE L2 3261 3312 -1 3827 132 3 2 chr2 8226414 8227021 -242460833 + L1PB3 LINE L1 5545 6152 -2 200 267 173 40 chr2 8227205 8227280 -242460574 - L2 LINE L2 -6 3266 3182 195 342 127 50 chr2 8227412 8227775 -242460079 - L2 LINE L2 -1 3312 2922 986 199 6 0 chr2 8228317 8228488 -242459366 - FAM SINE Alu -3 172 1 903 271 104 56 chr2 8228531 8229270 -242458584 + L2 LINE L2 2545 3313 0 22 56 0 0 chr2 8229873 8229909 -242457945 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr2 8231481 8231503 -242456351 + AT_rich Low_complexity Low_complexity 1 22 0 1773 172 0 7 chr2 8232742 8233033 -242454821 + AluJo SINE Alu 1 289 -23 23 33 0 0 chr2 8233033 8233063 -242454791 + AT_rich Low_complexity Low_complexity 1 30 0 252 137 0 0 chr2 8234299 8234350 -242453504 + (TA)n Simple_repeat Simple_repeat 1 51 0 2156 121 7 0 chr2 8234814 8235112 -242452742 + AluSx SINE Alu 1 300 -12 732 195 0 8 chr2 8236115 8236238 -242451616 - FLAM_A SINE Alu -11 122 1 2809 3 0 0 chr2 8236387 8236689 -242451165 + AluYa5 SINE Alu 1 302 -9 715 223 42 0 chr2 8237152 8237345 -242450509 - MER20 DNA MER1_type -2 217 17 337 264 114 36 chr2 8237376 8237543 -242450311 - L2 LINE L2 -78 3235 3056 * 2714 291 128 31 chr2 8237538 8239200 -242448654 - L2 LINE L2 -448 2866 1043 2215 119 3 0 chr2 8240259 8240561 -242447293 - AluSx SINE Alu -9 303 1 361 287 144 23 chr2 8240565 8240739 -242447115 + L2 LINE L2 2823 3017 -296 3409 279 106 28 chr2 8240757 8240814 -242447040 - L2 LINE L2 -38 3275 3224 2225 94 30 0 chr2 8240814 8241113 -242446741 + AluSg SINE Alu 2 309 -1 3409 279 106 28 chr2 8241113 8241161 -242446693 - L2 LINE L2 -89 3224 3181 200 59 29 0 chr2 8241161 8241195 -242446659 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3409 279 106 28 chr2 8241195 8242609 -242445245 - L2 LINE L2 -132 3181 1637 384 257 46 28 chr2 8242678 8242787 -242445067 + L2 LINE L2 3203 3313 0 25 51 0 0 chr2 8243156 8243195 -242444659 + AT_rich Low_complexity Low_complexity 1 39 0 23 33 0 0 chr2 8243300 8243330 -242444524 + AT_rich Low_complexity Low_complexity 1 30 0 1606 174 18 21 chr2 8244106 8244388 -242443466 - AluJo SINE Alu -31 281 1 226 224 134 30 chr2 8245138 8245205 -242442649 + MER5B DNA MER1_type 2 75 -103 210 331 90 8 chr2 8246756 8246889 -242440965 - MIR SINE MIR -33 229 86 252 191 0 73 chr2 8247206 8247274 -242440580 + L1MC1 LINE L1 7 69 -6357 8376 197 63 29 chr2 8247274 8247295 -242440559 + L1MC1 LINE L1 2001 2020 -4593 352 51 34 0 chr2 8247295 8247354 -242440500 + (TG)n Simple_repeat Simple_repeat 2 62 0 8376 197 63 29 chr2 8247354 8248628 -242439226 + L1MC1 LINE L1 2020 3249 -3364 1935 145 30 3 chr2 8248628 8248932 -242438922 + AluJb SINE Alu 1 312 0 8376 197 63 29 chr2 8248932 8249700 -242438154 + L1MC1 LINE L1 3249 3989 -2624 2204 112 3 13 chr2 8249700 8250003 -242437851 + AluSq SINE Alu 1 300 -13 8376 197 63 29 chr2 8250003 8252371 -242435483 + L1MC1 LINE L1 3989 6593 -20 198 103 0 0 chr2 8252380 8252409 -242435445 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 1699 187 14 0 chr2 8254372 8254661 -242433193 - AluJb SINE Alu -19 293 1 241 240 264 8 chr2 8255064 8255193 -242432661 + MER103 DNA DNA 1 162 -4 2298 91 3 3 chr2 8255267 8255564 -242432290 - AluSq SINE Alu -16 297 1 24 0 0 0 chr2 8256165 8256189 -242431665 + AT_rich Low_complexity Low_complexity 1 24 0 2379 65 0 10 chr2 8256279 8256585 -242431269 - AluY SINE Alu -8 303 1 239 186 47 0 chr2 8258355 8258398 -242429456 + MER57A LTR ERV1 295 339 -64 597 173 43 81 chr2 8258464 8258649 -242429205 - MER104 DNA MER2_type -1 179 2 500 305 98 42 chr2 8258979 8259477 -242428377 + L1MC/D LINE L1 4859 5384 -762 542 259 141 15 chr2 8259509 8259788 -242428066 + L1MC/D LINE L1 5364 5664 -457 261 191 162 0 chr2 8259851 8259919 -242427935 + L1MC/D LINE L1 5678 5756 -2052 23 33 0 0 chr2 8260164 8260194 -242427660 + AT_rich Low_complexity Low_complexity 1 30 0 1631 155 53 8 chr2 8260221 8260485 -242427369 + AluJo SINE Alu 1 276 -36 1539 165 8 4 chr2 8260485 8260734 -242427120 - AluJb SINE Alu -62 250 1 433 198 10 30 chr2 8263411 8263512 -242424342 - AluJo SINE Alu -162 150 52 206 293 17 0 chr2 8264219 8264277 -242423577 + MIR SINE MIR 85 143 -65 923 183 6 23 chr2 8264879 8265054 -242422800 - FRAM SINE Alu -5 171 1 1125 321 130 19 chr2 8267077 8267240 -242420614 - L2 LINE L2 -37 3276 3132 1926 144 3 10 chr2 8267240 8267531 -242420323 + AluJb SINE Alu 1 289 -23 1125 321 130 19 chr2 8267531 8268275 -242419579 - L2 LINE L2 -181 3132 2251 722 197 8 0 chr2 8269345 8269472 -242418382 + FLAM_C SINE Alu 1 128 -5 25 65 0 0 chr2 8270233 8270279 -242417575 + AT_rich Low_complexity Low_complexity 1 46 0 2663 218 59 26 chr2 8270387 8271081 -242416773 - MER21B LTR ERV1 -49 814 98 226 225 11 101 chr2 8271200 8271289 -242416565 - MER21B LTR ERV1 -766 97 17 1635 191 38 0 chr2 8271296 8271611 -242416243 + MER7A DNA MER2_type 21 345 -1 25 0 0 0 chr2 8272001 8272026 -242415828 + AT_rich Low_complexity Low_complexity 1 25 0 1985 138 7 7 chr2 8272209 8272498 -242415356 - AluSx SINE Alu -23 289 1 327 271 97 32 chr2 8272669 8272824 -242415030 - MIR SINE MIR -48 214 50 856 171 14 47 chr2 8273010 8273221 -242414633 + MER3 DNA MER1_type 1 204 -5 2059 149 0 7 chr2 8273460 8273762 -242414092 + AluSx SINE Alu 4 303 -9 2150 113 0 14 chr2 8274618 8274938 -242412916 - AluSx SINE Alu 0 312 1 45 34 0 0 chr2 8275084 8275143 -242412711 + AT_rich Low_complexity Low_complexity 1 59 0 2307 92 7 0 chr2 8276121 8276416 -242411438 + AluSx SINE Alu 1 297 -15 489 228 0 35 chr2 8276580 8276725 -242411129 - L1ME3 LINE L1 -1 6161 6022 24 67 0 0 chr2 8277156 8277201 -242410653 + AT_rich Low_complexity Low_complexity 1 45 0 251 111 0 22 chr2 8277437 8277482 -242410372 + (GGAA)n Simple_repeat Simple_repeat 4 47 0 2280 97 0 16 chr2 8278547 8278857 -242408997 + AluSg SINE Alu 1 305 -5 1589 192 65 107 chr2 8279204 8279897 -242407957 + L1MC4a LINE L1 6840 7503 -305 2047 147 13 0 chr2 8280024 8280331 -242407523 + AluJb SINE Alu 1 311 -1 1865 128 0 4 chr2 8280331 8280596 -242407258 + AluSx SINE Alu 41 304 -8 503 351 26 22 chr2 8281179 8281410 -242406444 + MIR SINE MIR 5 236 -26 23 33 0 0 chr2 8282118 8282148 -242405706 + AT_rich Low_complexity Low_complexity 1 30 0 2178 107 3 3 chr2 8284447 8284738 -242403116 + AluSx SINE Alu 1 291 -21 266 248 198 66 chr2 8285195 8285316 -242402538 + L2 LINE L2 3136 3272 0 209 138 100 12 chr2 8286025 8286105 -242401749 + (TATAA)n Simple_repeat Simple_repeat 4 90 0 316 284 156 28 chr2 8286356 8286606 -242401248 + MLT1J LTR MaLR 230 511 0 434 226 57 124 chr2 8287138 8287245 -242400609 + MARNA DNA Mariner 88 201 -385 1851 142 16 32 chr2 8287245 8287554 -242400300 + AluJb SINE Alu 1 304 -8 434 226 57 124 chr2 8287554 8287760 -242400094 + MARNA DNA Mariner 201 380 -206 1594 164 82 0 chr2 8287877 8288158 -242399696 - AluJo SINE Alu -8 304 1 21 0 0 0 chr2 8288338 8288359 -242399495 + AT_rich Low_complexity Low_complexity 1 21 0 185 333 83 30 chr2 8288997 8289129 -242398725 + MIR SINE MIR 124 262 0 1753 168 7 3 chr2 8289305 8289608 -242398246 + AluJb SINE Alu 2 305 -7 2869 153 12 36 chr2 8289616 8289996 -242397858 + L1MB2 LINE L1 5681 6048 -123 2086 127 3 3 chr2 8289996 8290296 -242397558 + AluSx SINE Alu 1 300 -12 2869 153 12 36 chr2 8290296 8290417 -242397437 + L1MB2 LINE L1 6048 6170 -1 197 116 0 47 chr2 8290468 8290511 -242397343 + (CATATA)n Simple_repeat Simple_repeat 2 42 0 2198 79 20 17 chr2 8290710 8291002 -242396852 + AluY SINE Alu 2 294 -17 2354 90 7 0 chr2 8291232 8291542 -242396312 + AluSp SINE Alu 1 312 -1 191 135 27 0 chr2 8291830 8291867 -242395987 + L2 LINE L2 3273 3310 -3 899 224 65 53 chr2 8292249 8292570 -242395284 + L2 LINE L2 2333 2657 -657 1000 99 46 7 chr2 8292574 8292726 -242395128 + L1MA7 LINE L1 6128 6285 -6 708 233 45 11 chr2 8292738 8292914 -242394940 - MER5A DNA MER1_type -6 183 2 439 324 97 29 chr2 8292914 8293396 -242394458 + L2 LINE L2 2709 3225 -88 869 236 68 8 chr2 8293402 8293639 -242394215 + L1ME1 LINE L1 4923 5173 -973 1068 261 40 40 chr2 8293651 8293976 -242393878 + MLT1-int LTR MaLR 1046 1370 -1 1046 243 41 4 chr2 8293976 8294231 -242393623 + L1ME1 LINE L1 5895 6159 -7 290 174 0 0 chr2 8294245 8294291 -242393563 + LTR56 LTR ERV1 349 394 -51 365 230 290 14 chr2 8294304 8294656 -242393198 + L1ME4a LINE L1 5601 6049 -72 246 222 97 14 chr2 8295076 8295148 -242392706 - MLT1K LTR MaLR 0 588 511 2243 118 0 0 chr2 8295326 8295622 -242392232 - AluJb SINE Alu -16 296 1 204 340 10 10 chr2 8295851 8295954 -242391900 + L2 LINE L2 2594 2696 -618 1530 167 19 55 chr2 8296361 8296673 -242391181 - L1MA4 LINE L1 -3 6297 5997 198 283 50 0 chr2 8296730 8296790 -242391064 + MIR SINE MIR 197 259 -3 23 78 0 0 chr2 8296909 8296960 -242390894 + AT_rich Low_complexity Low_complexity 1 51 0 350 365 54 12 chr2 8296961 8297128 -242390726 + L2 LINE L2 3098 3271 -1 451 296 66 28 chr2 8297636 8297849 -242390005 + L2 LINE L2 2673 2893 -421 * 617 248 57 108 chr2 8297844 8298159 -242389695 + L2 LINE L2 3014 3312 -1 242 0 61 0 chr2 8298269 8298302 -242389552 + (TATG)n Simple_repeat Simple_repeat 2 36 0 1757 156 3 27 chr2 8298309 8298610 -242389244 - AluJo SINE Alu -18 294 1 198 324 28 0 chr2 8298631 8298702 -242389152 + L2 LINE L2 3223 3295 -18 699 82 0 10 chr2 8299046 8299144 -242388710 + AluJb SINE Alu 209 305 -7 559 242 24 30 chr2 8299883 8300048 -242387806 - MER5A DNA MER1_type 0 189 26 203 308 51 13 chr2 8300202 8300280 -242387574 + MER5A DNA MER1_type 70 150 -39 180 121 15 61 chr2 8301126 8301192 -242386662 + (CGGGG)n Simple_repeat Simple_repeat 1 63 0 1672 139 3 86 chr2 8301640 8301967 -242385887 + AluJo SINE Alu 5 306 0 2592 117 5 8 chr2 8302129 8302505 -242385349 - THE1C LTR MaLR 0 375 1 1794 160 37 7 chr2 8303154 8303454 -242384400 - AluSx SINE Alu -3 309 1 620 240 117 0 chr2 8303653 8303830 -242384024 + MLT1J2 LTR MaLR 244 398 -11 197 214 48 0 chr2 8304539 8304581 -242383273 - L2 LINE L2 -50 3222 3179 384 260 60 72 chr2 8307050 8307291 -242380563 + MLT1G1 LTR MaLR 1 237 -312 228 286 0 0 chr2 8307365 8307421 -242380433 + GA-rich Low_complexity Low_complexity 2 57 0 289 254 16 95 chr2 8307579 8307705 -242380149 + MLT1J2 LTR MaLR 451 566 -29 362 303 99 24 chr2 8308375 8308586 -242379268 + MLT1J-int LTR MaLR 1141 1367 -4 2579 143 43 17 chr2 8308675 8309096 -242378758 + MSTB1 LTR MaLR 1 432 0 265 273 0 15 chr2 8309103 8309169 -242378685 + MLT1J LTR MaLR 64 128 -427 6330 153 48 5 chr2 8309173 8309451 -242378403 + L1PB1 LINE L1 3868 4133 -2018 1082 47 24 12 chr2 8309451 8309621 -242378233 + (GAAA)n Simple_repeat Simple_repeat 3 174 0 6330 153 48 5 chr2 8309621 8311450 -242376404 + L1PB1 LINE L1 4133 6069 -82 385 161 0 0 chr2 8311522 8311584 -242376270 - MER63 DNA MER1_type -756 305 244 269 277 53 0 chr2 8311524 8311618 -242376236 + MER63 DNA MER1_type 426 524 -536 * 884 219 51 30 chr2 8311660 8311897 -242375957 - MER63 DNA MER1_type -815 246 5 * 1136 161 86 48 chr2 8311887 8312135 -242375719 + MER33 DNA MER1_type 10 272 -2313 2361 107 7 0 chr2 8312135 8312443 -242375411 - AluSx SINE Alu -2 310 1 1136 161 86 48 chr2 8312443 8312486 -242375368 + MER33 DNA MER1_type 272 312 -12 506 247 96 18 chr2 8312541 8312707 -242375147 + MLT1J LTR MaLR 231 409 -102 207 0 0 0 chr2 8312736 8312759 -242375095 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 228 300 43 0 chr2 8313038 8313108 -242374746 + MIR SINE MIR 74 146 -116 390 286 64 82 chr2 8313309 8313529 -242374325 + MLT1L LTR MaLR 389 604 -11 3074 226 83 11 chr2 8314074 8315386 -242372468 + L1ME2 LINE L1 4705 6106 -58 1118 198 60 52 chr2 8315553 8315821 -242372033 - Tigger1 DNA MER2_type -2141 277 8 4331 208 79 31 chr2 8315967 8316962 -242370892 - L1MB7 LINE L1 -10 6174 5227 1632 163 10 42 chr2 8316962 8317268 -242370586 - AluJo SINE Alu -14 298 3 4331 208 79 31 chr2 8317268 8318127 -242369727 - L1MB7 LINE L1 -957 5227 4246 2639 251 156 25 chr2 8318116 8319683 -242368171 - L1M4c LINE L1 -3950 2875 966 * 1104 225 136 108 chr2 8320164 8320865 -242366989 + LTR8A LTR ERV1 1 720 -7 465 233 25 63 chr2 8320893 8321052 -242366802 - L1M4c LINE L1 -6320 222 70 283 274 82 0 chr2 8322870 8322943 -242364911 - L2 LINE L2 -57 3215 3137 589 170 156 21 chr2 8322987 8323128 -242364726 + MER104 DNA Tc2 18 177 -3 557 251 114 0 chr2 8323130 8323297 -242364557 - MIR SINE MIR -63 199 14 952 182 0 28 chr2 8323316 8323492 -242364362 - AluJb SINE Alu 0 312 142 243 282 94 0 chr2 8324092 8324177 -242363677 - MIR SINE MIR -7 255 163 2876 133 27 0 chr2 8325035 8325449 -242362405 - MSTA LTR MaLR -3 425 1 1920 192 113 21 chr2 8325677 8326156 -242361698 - Charlie1b DNA MER1_type 0 523 1 366 80 0 0 chr2 8326521 8326571 -242361283 + (TTCA)n Simple_repeat Simple_repeat 3 52 0 1833 166 0 3 chr2 8326571 8326855 -242360999 - AluJb SINE Alu -29 283 1 675 118 0 0 chr2 8326876 8326969 -242360885 - L1P4 LINE L1 -469 5705 5613 3996 45 68 0 chr2 8326973 8327490 -242360364 + LTR30 LTR ERV1 1 552 -170 3461 16 3 0 chr2 8327490 8327876 -242359978 - L1PA4 LINE L1 -208 5947 5561 1700 45 0 0 chr2 8327876 8328078 -242359776 + L1PA4 LINE L1 5952 6153 -2 1390 78 6 0 chr2 8328078 8328257 -242359597 + LTR30 LTR ERV1 543 722 0 3672 77 14 115 chr2 8328257 8328545 -242359309 - L1PA8A LINE L1 -499 5632 5316 440 103 0 0 chr2 8328545 8328603 -242359251 - MSTA LTR MaLR -95 333 276 3672 77 14 115 chr2 8328603 8329171 -242358683 - L1PA8A LINE L1 -815 5316 4770 368 255 101 90 chr2 8329817 8330005 -242357849 + MIR SINE MIR 56 245 -17 1441 190 30 7 chr2 8330569 8330838 -242357016 - AluJo SINE Alu -30 282 8 284 327 9 47 chr2 8333304 8333411 -242354443 - MIR SINE MIR -82 126 24 267 279 29 0 chr2 8333741 8333809 -242354045 + L2 LINE L2 3153 3222 -50 2099 99 7 20 chr2 8334112 8334406 -242353448 + AluSg SINE Alu 21 310 0 222 37 0 0 chr2 8334414 8334441 -242353413 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 467 248 14 43 chr2 8335364 8335505 -242352349 - L2 LINE L2 0 3272 3136 2302 106 0 3 chr2 8337872 8338183 -242349671 - AluSx SINE Alu -2 310 1 744 100 27 0 chr2 8338998 8339108 -242348746 + MER3 DNA MER1_type 1 113 -96 1050 98 92 0 chr2 8339110 8339263 -242348591 + AluSg/x SINE Alu 139 305 -7 417 214 102 10 chr2 8339263 8339361 -242348493 + MER3 DNA MER1_type 103 209 0 197 257 139 0 chr2 8340025 8340126 -242347728 + L2 LINE L2 2230 2344 -970 * 251 300 29 0 chr2 8340124 8340194 -242347660 - L2 LINE L2 0 3313 3242 812 239 25 5 chr2 8340402 8340599 -242347255 + MER20 DNA MER1_type 1 201 -18 2197 113 0 3 chr2 8341460 8341753 -242346101 - AluSg SINE Alu -18 292 1 324 0 0 0 chr2 8342239 8342275 -242345579 + (CA)n Simple_repeat Simple_repeat 2 37 0 321 275 107 20 chr2 8342925 8343074 -242344780 + MIR SINE MIR 101 262 0 417 320 64 0 chr2 8343461 8343586 -242344268 - L2 LINE L2 -1 3271 3139 450 344 0 7 chr2 8343779 8343933 -242343921 - MIR SINE MIR -109 153 1 9436 136 25 11 chr2 8344058 8345682 -242342172 + Tigger1 DNA MER2_type 1 1647 -771 435 52 0 0 chr2 8345866 8345924 -242341930 + (TA)n Simple_repeat Simple_repeat 2 59 0 1317 164 36 73 chr2 8345924 8346198 -242341656 - AluJb SINE Alu -2 310 47 25 0 0 0 chr2 8346206 8346231 -242341623 + AT_rich Low_complexity Low_complexity 1 25 0 2378 91 3 0 chr2 8346432 8346728 -242341126 - AluSp SINE Alu -16 297 1 593 223 152 40 chr2 8346815 8347039 -242340815 - LTR50 LTR ERVL -356 439 191 189 0 0 0 chr2 8347220 8347241 -242340613 + (A)n Simple_repeat Simple_repeat 1 21 0 416 301 124 16 chr2 8347704 8347890 -242339964 - MIR3 SINE MIR -1 207 2 334 277 187 24 chr2 8348144 8348310 -242339544 - MIR SINE MIR -50 212 20 776 204 15 91 chr2 8349375 8349704 -242338150 + L1MC4 LINE L1 7738 8041 -1 358 250 36 18 chr2 8349997 8350109 -242337745 + MIR SINE MIR 31 144 -118 2219 106 10 0 chr2 8350232 8350525 -242337329 - AluSx SINE Alu -16 296 1 195 218 0 0 chr2 8351248 8351303 -242336551 + GA-rich Low_complexity Low_complexity 3 57 0 1127 157 41 83 chr2 8351939 8352181 -242335673 + AluJb SINE Alu 79 310 -2 408 55 0 0 chr2 8352183 8352238 -242335616 + (TA)n Simple_repeat Simple_repeat 1 55 0 279 282 56 51 chr2 8352544 8352760 -242335094 - L1MEd LINE L1 -4881 1238 1022 29 28 0 0 chr2 8352905 8352941 -242334913 + AT_rich Low_complexity Low_complexity 1 36 0 1887 143 14 0 chr2 8353381 8353702 -242334152 + AluSx SINE Alu 1 325 0 1294 251 256 3 chr2 8353782 8354416 -242333438 - LTR50 LTR ERVL -1 794 1 1469 174 14 56 chr2 8354635 8354922 -242332932 + AluJo SINE Alu 1 275 -37 560 119 50 0 chr2 8354959 8355060 -242332794 + L1MC4a LINE L1 6890 6995 -813 1714 176 41 13 chr2 8355190 8355581 -242332273 - LTR52 LTR ERVL -9 412 11 2046 160 21 0 chr2 8355601 8355976 -242331878 + MLT1B LTR MaLR 1 383 -7 2188 121 3 3 chr2 8356687 8356992 -242330862 + AluSx SINE Alu 6 310 -2 270 293 98 12 chr2 8356998 8357080 -242330774 + MIR SINE MIR 20 108 -154 2289 102 10 0 chr2 8357260 8357553 -242330301 - AluSp SINE Alu -17 296 1 21 36 0 0 chr2 8357559 8357587 -242330267 + AT_rich Low_complexity Low_complexity 1 28 0 468 239 118 31 chr2 8358619 8358987 -242328867 - L1ME LINE L1 -528 5593 5175 225 132 0 26 chr2 8359698 8359736 -242328118 + MER3 DNA MER1_type 46 82 -127 513 225 17 0 chr2 8360179 8360299 -242327555 + MER33 DNA MER1_type 1 122 -202 283 329 50 56 chr2 8360355 8360516 -242327338 - MER5A DNA MER1_type -12 177 18 586 298 116 6 chr2 8360614 8360976 -242326878 + L1ME3 LINE L1 5428 5829 -333 747 256 53 112 chr2 8361519 8361925 -242325929 - L1MC4 LINE L1 -561 7481 7130 437 90 15 0 chr2 8361925 8361992 -242325862 + (TCTA)n Simple_repeat Simple_repeat 3 70 0 747 256 53 112 chr2 8361992 8362265 -242325589 - L1MC4 LINE L1 -912 7130 6842 2177 174 133 2 chr2 8362435 8362888 -242324966 - MLT2B2 LTR ERVL -3 512 1 694 254 181 14 chr2 8362900 8363370 -242324484 - MLT1H LTR MaLR -5 550 8 1252 108 0 0 chr2 8364210 8364367 -242323487 + AluSq SINE Alu 1 157 -156 1445 88 83 5 chr2 8364367 8364584 -242323270 + L1PB1 LINE L1 5918 6151 0 23 0 0 0 chr2 8364584 8364607 -242323247 + AT_rich Low_complexity Low_complexity 1 23 0 4450 135 5 23 chr2 8364626 8365405 -242322449 + L1PB4 LINE L1 5378 6142 -14 396 0 0 0 chr2 8365776 8365820 -242322034 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 602 176 57 100 chr2 8367361 8367571 -242320283 - MER3 DNA MER1_type -8 201 1 2193 112 3 0 chr2 8368382 8368687 -242319167 + AluSq SINE Alu 1 306 -7 615 297 108 0 chr2 8369060 8369282 -242318572 - MIR SINE MIR -12 250 5 2055 134 0 3 chr2 8369309 8369636 -242318218 - AluSx SINE Alu 0 312 1 214 158 53 35 chr2 8370203 8370260 -242317594 + C-rich Low_complexity Low_complexity 1 58 0 22 99 0 0 chr2 8370369 8370440 -242317414 + GC_rich Low_complexity Low_complexity 1 71 0 517 246 222 10 chr2 8371180 8371387 -242316467 - MIR SINE MIR -3 259 9 544 97 0 0 chr2 8372114 8372186 -242315668 + AluJ/FRAM SINE Alu 222 293 -19 2090 113 17 13 chr2 8372188 8372489 -242315365 + AluSx SINE Alu 1 302 -10 225 0 0 0 chr2 8372503 8372528 -242315326 + (GA)n Simple_repeat Simple_repeat 2 26 0 728 278 86 17 chr2 8372591 8372825 -242315029 + MIR SINE MIR 3 252 -10 2249 188 34 34 chr2 8372828 8372893 -242314961 - MLT2B1 LTR ERVL -8 512 448 481 75 12 12 chr2 8372893 8372973 -242314881 + (TAGA)n Simple_repeat Simple_repeat 1 80 0 2249 188 34 34 chr2 8372973 8373413 -242314441 - MLT2B1 LTR ERVL -71 449 7 198 189 0 0 chr2 8373701 8373738 -242314116 - MIR SINE MIR -10 252 216 443 285 27 43 chr2 8373873 8374039 -242313815 + MIR SINE MIR 19 180 -66 217 262 110 84 chr2 8374611 8374802 -242313052 + MIR3 SINE MIR 5 200 -8 538 229 260 10 chr2 8376294 8376486 -242311368 + MIR SINE MIR 22 261 -1 186 174 0 0 chr2 8376491 8376537 -242311317 + (CAT)n Simple_repeat Simple_repeat 3 48 0 1502 106 5 0 chr2 8376614 8376831 -242311023 + L1PA10 LINE L1 5949 6166 -2 374 351 27 21 chr2 8377594 8377782 -242310072 + MER5A DNA MER1_type 1 189 0 922 243 65 90 chr2 8378456 8378565 -242309289 - HAL1 LINE L1 -31 2476 2366 2053 108 19 54 chr2 8378565 8378881 -242308973 - AluSx SINE Alu -7 305 1 922 243 65 90 chr2 8378881 8379281 -242308573 - HAL1 LINE L1 -141 2366 1980 338 351 31 4 chr2 8379391 8379619 -242308235 - HAL1 LINE L1 -510 1997 1764 457 180 39 47 chr2 8379794 8379922 -242307932 + MER106A DNA MER1_type 108 234 -2 1333 214 88 30 chr2 8380176 8380675 -242307179 - HAL1 LINE L1 -910 1597 1070 2315 116 0 19 chr2 8381127 8381445 -242306409 + AluSx SINE Alu 1 312 0 22 0 0 0 chr2 8381728 8381750 -242306104 + AT_rich Low_complexity Low_complexity 1 22 0 363 193 36 12 chr2 8382953 8383036 -242304818 - L2 LINE L2 0 3313 3229 27 62 0 0 chr2 8383520 8383568 -242304286 + AT_rich Low_complexity Low_complexity 1 48 0 709 45 0 0 chr2 8383890 8383978 -242303876 + L1PA5 LINE L1 11 98 -6048 * 24800 49 3 1 chr2 8383976 8389493 -242298361 + L1PA5 LINE L1 623 6154 0 363 233 126 37 chr2 8389608 8389823 -242298031 + L1MC/D LINE L1 5311 5544 -2264 765 293 120 13 chr2 8390058 8390509 -242297345 + MLT1L LTR MaLR 24 522 -93 207 275 0 58 chr2 8391670 8391739 -242296115 - L2 LINE L2 -66 3206 3142 16468 187 52 17 chr2 8391878 8393007 -242294847 - L1PA15-16 LINE L1 -948 5901 4813 2282 82 0 0 chr2 8393007 8393315 -242294539 - AluY SINE Alu 0 308 1 16468 187 52 17 chr2 8393315 8393796 -242294058 - L1PA15-16 LINE L1 -2036 4813 4350 2175 135 0 0 chr2 8393796 8394093 -242293761 - AluSx SINE Alu -15 297 1 16468 187 52 17 chr2 8394093 8398208 -242289646 - L1PA15-16 LINE L1 -2499 4350 10 3140 126 23 6 chr2 8398224 8398741 -242289113 + Tigger1 DNA MER2_type 1893 2418 0 1728 180 27 23 chr2 8399005 8399305 -242288549 + AluJo SINE Alu 1 301 -11 347 220 86 59 chr2 8399619 8399805 -242288049 + L1MC5 LINE L1 7717 7907 -54 1970 174 0 3 chr2 8402038 8402349 -242285505 - AluJb SINE Alu -2 310 1 199 204 0 23 chr2 8402873 8402917 -242284937 - L2 LINE L2 0 3272 3230 226 246 87 14 chr2 8403328 8403397 -242284457 + MER5A DNA MER1_type 63 136 -53 327 328 82 16 chr2 8403729 8404144 -242283710 + L1ME LINE L1 5308 5706 -415 265 342 0 8 chr2 8404328 8404445 -242283409 + LTR16B LTR ERVL 1 116 -348 365 208 13 0 chr2 8404712 8404789 -242283065 - MIR SINE MIR -47 215 138 246 156 0 0 chr2 8405235 8405280 -242282574 + (CA)n Simple_repeat Simple_repeat 1 45 0 207 0 0 0 chr2 8407036 8407059 -242280795 + (CA)n Simple_repeat Simple_repeat 1 23 0 374 222 51 34 chr2 8407062 8407179 -242280675 + HAL1 LINE L1 795 913 -1594 1619 224 69 93 chr2 8407380 8407521 -242280333 + HAL1 LINE L1 971 1114 -1393 2207 105 0 7 chr2 8407521 8407816 -242280038 + AluSp SINE Alu 3 295 -18 1619 224 69 93 chr2 8407816 8408044 -242279810 + HAL1 LINE L1 1114 1346 -1161 2108 121 0 23 chr2 8408044 8408349 -242279505 + AluSx SINE Alu 1 298 -14 1619 224 69 93 chr2 8408349 8408493 -242279361 + HAL1 LINE L1 1346 1492 -1015 2396 57 3 3 chr2 8408493 8408789 -242279065 + AluY SINE Alu 1 296 -15 1619 224 69 93 chr2 8408789 8409152 -242278702 + HAL1 LINE L1 1492 1828 -679 304 309 36 63 chr2 8409292 8409515 -242278339 + HAL1 LINE L1 1849 2065 -442 237 245 49 0 chr2 8409540 8409642 -242278212 + HAL1 LINE L1 2068 2174 -333 4677 157 30 50 chr2 8409662 8410540 -242277314 + L1MB7 LINE L1 4901 5740 -444 2535 109 3 8 chr2 8410540 8410906 -242276948 - THE1B LTR MaLR 0 364 1 4677 157 30 50 chr2 8410906 8411330 -242276524 + L1MB7 LINE L1 5740 6171 -13 42829 36 0 0 chr2 8411350 8417515 -242270339 + L1PA4 LINE L1 4 6169 0 2408 81 3 0 chr2 8417517 8417812 -242270042 + AluSg SINE Alu 1 296 -14 374 291 108 24 chr2 8417812 8418107 -242269747 + HAL1 LINE L1 2187 2506 -1 429 293 73 24 chr2 8418424 8418629 -242269225 + MIR SINE MIR 37 251 -11 226 318 106 65 chr2 8419017 8419234 -242268620 + MIR SINE MIR 31 256 -6 1576 172 11 8 chr2 8419660 8419921 -242267933 - AluJb SINE Alu -44 268 7 345 267 151 5 chr2 8419953 8420187 -242267667 - L1ME2 LINE L1 -248 5914 5650 626 246 5 5 chr2 8420188 8420375 -242267479 - Charlie1 DNA MER1_type 0 2761 2575 629 292 5 10 chr2 8420381 8420598 -242267256 - L1ME2 LINE L1 -567 5599 5405 1808 134 33 24 chr2 8420810 8421139 -242266715 + MER1B DNA MER1_type 8 339 0 318 238 86 29 chr2 8421247 8421352 -242266502 + MIR SINE MIR 107 217 -45 491 206 44 56 chr2 8421356 8421516 -242266338 + L1MC4a LINE L1 5775 5932 -1876 360 0 0 0 chr2 8421538 8421578 -242266276 + (TA)n Simple_repeat Simple_repeat 2 41 0 2104 261 71 50 chr2 8421596 8421654 -242266200 + L1MC4a LINE L1 6104 6159 -1649 180 77 0 0 chr2 8421654 8421680 -242266174 + (TTAAA)n Simple_repeat Simple_repeat 3 28 0 2104 261 71 50 chr2 8421680 8422650 -242265204 + L1MC4a LINE L1 6159 7154 -654 295 276 152 21 chr2 8422726 8422868 -242264986 - MIR SINE MIR -62 146 15 22 0 0 0 chr2 8423507 8423529 -242264325 + AT_rich Low_complexity Low_complexity 1 22 0 2764 142 11 2 chr2 8423727 8424177 -242263677 - L1PA16 LINE L1 -1 6165 5712 2170 93 11 0 chr2 8424648 8424968 -242262886 - AluSg1 SINE Alu 0 323 1 1662 152 74 0 chr2 8425224 8425493 -242262361 - AluJb SINE Alu -23 289 1 322 333 139 6 chr2 8425524 8425689 -242262165 - MIR SINE MIR -38 224 38 208 269 0 0 chr2 8426413 8426465 -242261389 + L2 LINE L2 3262 3313 0 23 33 0 0 chr2 8428050 8428080 -242259774 + AT_rich Low_complexity Low_complexity 1 30 0 1191 222 18 45 chr2 8429504 8429901 -242257953 + L1ME1 LINE L1 5776 6161 -5 26 0 0 0 chr2 8429905 8429931 -242257923 + AT_rich Low_complexity Low_complexity 1 26 0 252 174 29 72 chr2 8430203 8430272 -242257582 - MIR3 SINE MIR -28 180 115 * 770 334 153 14 chr2 8430268 8431150 -242256704 + L2 LINE L2 2170 3179 -134 1623 100 4 8 chr2 8431291 8431532 -242256322 + L1PA8 LINE L1 5931 6170 -2 433 226 0 10 chr2 8431584 8431686 -242256168 + U13 snRNA snRNA 1 101 -3 305 264 94 19 chr2 8432150 8432256 -242255598 + L2 LINE L2 3189 3302 -11 251 294 118 8 chr2 8433045 8433164 -242254690 + MIR SINE MIR 55 186 -76 3496 152 73 6 chr2 8433356 8434045 -242253809 + L1MB8 LINE L1 5442 6176 -2 228 316 0 13 chr2 8434334 8434413 -242253441 + GA-rich Low_complexity Low_complexity 1 78 0 291 346 42 42 chr2 8434643 8434860 -242252994 + MIR SINE MIR 34 250 -12 525 194 0 11 chr2 8435393 8435486 -242252368 - L2 LINE L2 0 3272 3181 723 266 46 8 chr2 8435992 8436233 -242251621 + L1M4 LINE L1 3384 3633 -2513 947 236 98 0 chr2 8436237 8436513 -242251341 + L1MC4 LINE L1 7596 7898 -144 22 56 0 0 chr2 8436546 8436582 -242251272 + AT_rich Low_complexity Low_complexity 1 36 0 1525 148 67 78 chr2 8436718 8437091 -242250763 + L1MB2 LINE L1 5793 6161 -10 781 287 92 47 chr2 8438078 8438569 -242249285 + L2 LINE L2 2228 2740 -574 2008 178 18 50 chr2 8438582 8438983 -242248871 + L1MC3 LINE L1 7138 7525 -260 1809 144 46 7 chr2 8438983 8439267 -242248587 + AluJb SINE Alu 1 295 -17 2008 178 18 50 chr2 8439267 8439309 -242248545 + L1MC3 LINE L1 7525 7567 -218 1538 167 23 87 chr2 8439310 8439702 -242248152 + MLT1A2 LTR MaLR 3 505 0 1113 159 14 14 chr2 8439709 8439929 -242247925 + L1MC3 LINE L1 7566 7785 0 442 176 0 69 chr2 8440060 8440162 -242247692 + L1ME2 LINE L1 6069 6163 -1 393 279 33 25 chr2 8440197 8440319 -242247535 - MLT1G3 LTR MaLR -27 568 446 * 728 258 36 0 chr2 8440297 8440464 -242247390 - MLT1G3 LTR MaLR -187 343 171 338 252 47 16 chr2 8440521 8440648 -242247206 + L1ME4a LINE L1 5991 6121 0 261 327 44 25 chr2 8440663 8440822 -242247032 - Tigger8 DNA MER2_type -2 664 503 555 307 135 17 chr2 8441886 8442300 -242245554 - Tigger8 DNA MER2_type -162 504 42 224 374 0 26 chr2 8442418 8442533 -242245321 + L3 LINE CR1 1366 1477 -100 187 239 45 114 chr2 8442645 8442733 -242245121 - MIR SINE MIR -170 92 11 22 0 0 0 chr2 8443022 8443044 -242244810 + AT_rich Low_complexity Low_complexity 1 22 0 306 282 122 32 chr2 8444220 8444376 -242243478 - L3 LINE CR1 -384 1193 1024 481 264 37 62 chr2 8444454 8444696 -242243158 + MER102b DNA MER1_type 97 332 -9 763 173 0 36 chr2 8444986 8445125 -242242729 - FLAM_C SINE Alu -8 135 2 300 237 13 0 chr2 8446693 8446769 -242241085 - MIR SINE MIR -119 143 67 241 175 0 0 chr2 8447815 8447855 -242239999 + L1M2 LINE L1 5600 5639 -661 329 50 0 0 chr2 8447855 8447895 -242239959 + AluSc SINE Alu 216 255 -44 2582 50 0 3 chr2 8448280 8448580 -242239274 - AluY SINE Alu -12 299 1 251 350 0 20 chr2 8448709 8448809 -242239045 - MER5A DNA MER1_type -85 104 7 196 260 0 0 chr2 8448911 8448961 -242238893 - L2 LINE L2 -1444 1870 1821 604 249 135 54 chr2 8449186 8449535 -242238319 + LTR33 LTR ERVL 144 520 -1 417 236 67 61 chr2 8450349 8450514 -242237340 - MIR SINE MIR -52 210 45 187 231 154 0 chr2 8451164 8451229 -242236625 + MIR SINE MIR 123 197 -65 941 168 14 0 chr2 8453246 8453389 -242234465 - Tigger3b DNA MER2_type 0 1231 1087 4520 136 75 41 chr2 8453394 8454240 -242233614 - Tigger3b DNA MER2_type -357 874 1 1697 170 16 31 chr2 8456026 8456343 -242231511 + AluJo SINE Alu 1 312 0 931 102 5 43 chr2 8456344 8456530 -242231324 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 811 131 32 20 chr2 8456516 8456768 -242231086 + GA-rich Low_complexity Low_complexity 1 255 0 * 28 29 0 0 chr2 8457427 8457462 -242230392 + AT_rich Low_complexity Low_complexity 1 35 0 2923 176 54 48 chr2 8458323 8459029 -242228825 - MER67C LTR ERV1 0 710 1 353 225 22 0 chr2 8459383 8459472 -242228382 - HsTC2 DNA Tc2 -2 1896 1806 2620 200 89 21 chr2 8459501 8460627 -242227227 - L1M3c LINE L1 -4805 1336 3 10605 158 76 48 chr2 8460709 8461298 -242226556 - L1MC3 LINE L1 0 7785 7214 308 284 0 0 chr2 8461298 8461379 -242226475 - MLT1F1 LTR MaLR -442 125 45 10605 158 76 48 chr2 8461379 8462937 -242224917 - L1MC3 LINE L1 -571 7214 5497 611 272 122 68 chr2 8462937 8463404 -242224450 - LTR67 LTR ERVL -34 523 32 444 264 121 37 chr2 8463436 8463784 -242224070 + L1ME4a LINE L1 5699 6075 -46 21 0 0 0 chr2 8463789 8463810 -242224044 + AT_rich Low_complexity Low_complexity 1 21 0 1963 149 10 3 chr2 8463819 8464115 -242223739 + AluSx SINE Alu 1 298 -14 948 292 40 47 chr2 8464354 8464827 -242223027 - MLT1J LTR MaLR -9 502 33 564 195 81 0 chr2 8464827 8464950 -242222904 + FLAM_A SINE Alu 1 133 0 644 106 0 10 chr2 8464955 8465059 -242222795 + (GGAA)n Simple_repeat Simple_repeat 3 105 0 228 311 39 19 chr2 8465079 8465182 -242222672 - MER5B DNA MER1_type 0 178 74 1734 145 31 102 chr2 8465594 8466014 -242221840 + MLT1B LTR MaLR 1 390 0 640 202 9 0 chr2 8466135 8466249 -242221605 - MER31B LTR ERV1 -351 115 1 2223 119 7 0 chr2 8466997 8467300 -242220554 - AluSq SINE Alu -8 305 1 279 250 71 120 chr2 8467303 8467487 -242220367 - MER5B DNA MER1_type -3 175 1 421 296 0 0 chr2 8467487 8467595 -242220259 - MIR3 SINE MIR -48 160 53 650 156 266 0 chr2 8467845 8467999 -242219855 + L1PA16 LINE L1 5963 6157 -9 1926 137 50 7 chr2 8468041 8468341 -242219513 + AluSq SINE Alu 1 313 0 3061 161 78 24 chr2 8469029 8469661 -242218193 + MER39 LTR ERV1 1 707 0 2106 116 184 68 chr2 8469736 8470145 -242217709 + LTR54 LTR ERV1 1 470 -40 1618 184 0 49 chr2 8470145 8470449 -242217405 + AluJb SINE Alu 3 291 -21 2106 116 184 68 chr2 8470449 8470496 -242217358 + LTR54 LTR ERV1 470 510 0 1248 157 5 18 chr2 8472021 8472238 -242215616 + AluJo SINE Alu 85 298 -14 2299 97 0 26 chr2 8472318 8472627 -242215227 + AluSc SINE Alu 1 301 -8 2130 123 13 7 chr2 8472689 8472990 -242214864 + AluSx SINE Alu 1 303 -9 417 133 0 0 chr2 8473307 8473367 -242214487 + AluS SINE Alu 2 61 -257 189 271 93 19 chr2 8473382 8473489 -242214365 + MIR3 SINE MIR 87 201 -7 274 241 17 129 chr2 8473659 8473716 -242214138 + L3 LINE CR1 1282 1321 -256 1944 147 3 0 chr2 8473716 8474009 -242213845 + AluJb SINE Alu 1 294 -18 274 241 17 129 chr2 8474009 8474067 -242213787 + L3 LINE CR1 1321 1384 -193 530 293 72 14 chr2 8474107 8474329 -242213525 - MIR SINE MIR -26 236 2 246 277 15 0 chr2 8474357 8474422 -242213432 - L1MEc LINE L1 -5026 1370 1305 2634 64 0 0 chr2 8474486 8474797 -242213057 + AluY SINE Alu 1 311 0 630 263 84 49 chr2 8475209 8475547 -242212307 - L1MEc LINE L1 -4932 1273 932 2584 196 12 24 chr2 8475547 8476058 -242211796 - MLT1D LTR MaLR 0 505 1 630 263 84 49 chr2 8476058 8476133 -242211721 - L1MEc LINE L1 -5273 932 861 515 320 44 58 chr2 8476574 8476918 -242210936 - L2 LINE L2 -6 3266 2928 1597 142 0 28 chr2 8478617 8478870 -242208984 - AluJb SINE Alu -9 303 58 1873 152 3 3 chr2 8479814 8480103 -242207751 + AluJb SINE Alu 1 289 -23 409 278 44 58 chr2 8481125 8481330 -242206524 - MIR SINE MIR -2 260 59 1026 193 111 50 chr2 8481332 8481612 -242206242 - L1ME3A LINE L1 -1 6169 5873 1080 240 130 22 chr2 8481614 8482068 -242205786 - L1ME3A LINE L1 -1155 4991 4489 1667 149 0 0 chr2 8482068 8482323 -242205531 - AluSx SINE Alu -2 310 56 2286 257 89 40 chr2 8482423 8482494 -242205360 - L1ME3A LINE L1 -2576 3570 3504 2241 102 0 0 chr2 8482494 8482804 -242205050 - AluSg SINE Alu 0 310 1 2286 257 89 40 chr2 8482804 8482954 -242204900 - L1ME3A LINE L1 -2642 3504 3363 2580 61 0 13 chr2 8482954 8483267 -242204587 - AluY SINE Alu -2 309 1 2286 257 89 40 chr2 8483267 8483518 -242204336 - L1ME3A LINE L1 -2783 3363 3126 1217 152 46 112 chr2 8483518 8483693 -242204161 - AluSq SINE Alu -9 304 158 207 0 0 0 chr2 8483693 8483716 -242204138 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1217 152 46 112 chr2 8483716 8483863 -242203991 - AluSq SINE Alu -155 158 3 2286 257 89 40 chr2 8483863 8484596 -242203258 - L1ME3A LINE L1 -3020 3126 2303 608 192 8 0 chr2 8484644 8484774 -242203080 - L1M4 LINE L1 -2154 3992 3862 203 286 62 54 chr2 8484809 8484921 -242202933 - L2 LINE L2 0 3272 3160 981 146 19 13 chr2 8485391 8485726 -242202128 + FRAM SINE Alu 1 332 0 205 237 0 0 chr2 8485726 8485764 -242202090 + polypurine Low_complexity Low_complexity 3 40 0 2370 90 0 0 chr2 8486918 8487206 -242200648 + AluSx SINE Alu 1 288 -24 189 196 0 0 chr2 8487810 8487856 -242199998 + (CCA)n Simple_repeat Simple_repeat 2 47 0 660 192 0 17 chr2 8489714 8489886 -242197968 + (TG)n Simple_repeat Simple_repeat 2 170 0 245 263 219 53 chr2 8490115 8490229 -242197625 - L2 LINE L2 0 3272 3140 259 324 36 27 chr2 8491443 8491554 -242196300 - MIR SINE MIR -70 192 81 2035 151 20 0 chr2 8492312 8492610 -242195244 + AluJb SINE Alu 2 305 -7 2295 122 0 0 chr2 8493348 8493642 -242194212 + AluSx SINE Alu 1 294 -18 407 247 77 71 chr2 8494016 8494186 -242193668 - MIR SINE MIR -61 201 31 672 325 40 4 chr2 8494441 8494693 -242193161 + MIR SINE MIR 1 261 -1 2116 180 62 5 chr2 8494778 8495211 -242192643 - MER65C LTR ERV1 -2 459 2 2406 96 0 0 chr2 8496782 8497085 -242190769 + AluSx SINE Alu 1 303 -9 414 262 51 98 chr2 8497799 8498013 -242189841 + MIR SINE MIR 3 206 -56 284 235 15 15 chr2 8498789 8498852 -242189002 - MIR SINE MIR -36 226 164 450 289 94 25 chr2 8498852 8499076 -242188778 + MIR SINE MIR 3 239 -23 189 264 125 14 chr2 8499094 8499166 -242188688 - MIR SINE MIR -123 139 60 701 293 173 17 chr2 8500923 8501340 -242186514 + L1ME3A LINE L1 5433 5914 -256 2088 154 0 0 chr2 8501435 8501741 -242186113 + AluJb SINE Alu 1 306 -6 1835 103 107 11 chr2 8503600 8503897 -242183957 + AluSx SINE Alu 2 312 0 579 299 83 25 chr2 8503909 8504150 -242183704 + MIR SINE MIR 8 262 0 389 319 187 20 chr2 8504815 8505413 -242182441 + L2 LINE L2 2034 2731 -583 237 243 0 0 chr2 8505497 8505604 -242182250 + CT-rich Low_complexity Low_complexity 4 110 0 222 273 210 49 chr2 8506830 8506882 -242180972 + MIR SINE MIR 96 138 -124 2268 97 60 31 chr2 8506882 8507234 -242180620 + THE1B LTR MaLR 3 364 0 222 273 210 49 chr2 8507234 8507324 -242180530 + MIR SINE MIR 138 261 -1 1091 203 37 67 chr2 8507397 8507670 -242180184 + L1ME2 LINE L1 5643 5907 -257 1848 184 23 3 chr2 8507670 8507975 -242179879 - AluJb SINE Alu -1 311 1 1091 203 37 67 chr2 8507975 8508048 -242179806 + L1ME2 LINE L1 5907 5981 -183 396 338 29 0 chr2 8508302 8508438 -242179416 - MIR SINE MIR -10 252 113 381 227 58 138 chr2 8509098 8509184 -242178670 - L1ME LINE L1 -429 5692 5601 1952 171 0 0 chr2 8509184 8509489 -242178365 - AluJo SINE Alu -2 310 6 381 227 58 138 chr2 8509489 8509627 -242178227 - L1ME LINE L1 -520 5601 5486 2230 99 0 7 chr2 8509816 8510108 -242177746 - AluY SINE Alu -21 290 1 201 176 0 0 chr2 8510223 8510257 -242177597 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 580 273 64 11 chr2 8510345 8510532 -242177322 - MIR SINE MIR -28 234 38 441 286 67 0 chr2 8510579 8510698 -242177156 + MIR SINE MIR 23 149 -113 2294 105 3 0 chr2 8510887 8511191 -242176663 + AluSq SINE Alu 1 305 -8 2018 137 6 26 chr2 8511712 8512025 -242175829 - AluJo SINE Alu -5 307 1 353 203 0 14 chr2 8512583 8512652 -242175202 + MIR3 SINE MIR 89 156 -52 1698 228 13 51 chr2 8512991 8513499 -242174355 - L1PA16 LINE L1 -1 6165 5706 2145 147 0 3 chr2 8513516 8513823 -242174031 + AluSx SINE Alu 1 306 -6 515 242 204 8 chr2 8513984 8514224 -242173630 - L1ME3A LINE L1 -219 5951 5665 1898 185 0 0 chr2 8515552 8515854 -242172000 + AluJb SINE Alu 6 307 -5 2295 100 0 38 chr2 8515909 8516229 -242171625 + AluSq SINE Alu 1 308 -5 189 74 0 0 chr2 8516255 8516282 -242171572 + (CA)n Simple_repeat Simple_repeat 2 28 0 1121 158 30 0 chr2 8516620 8516823 -242171031 + MER2 DNA MER2_type 3 211 -134 1792 141 11 0 chr2 8516833 8517096 -242170758 - AluJb SINE Alu -5 307 42 186 43 0 0 chr2 8517889 8517912 -242169942 + (A)n Simple_repeat Simple_repeat 1 23 0 284 152 0 0 chr2 8517933 8517979 -242169875 - L2 LINE L2 0 3313 3268 214 278 178 0 chr2 8518842 8518932 -242168922 - L2 LINE L2 -1 3312 3207 2076 128 0 16 chr2 8519245 8519550 -242168304 - AluSx SINE Alu -12 300 1 28 0 0 0 chr2 8519907 8519935 -242167919 + AT_rich Low_complexity Low_complexity 1 28 0 783 133 0 0 chr2 8519935 8520040 -242167814 - FLAM_C SINE Alu -25 118 14 1297 266 64 21 chr2 8520062 8520498 -242167356 - MLT1F LTR MaLR 0 542 88 1062 182 9 78 chr2 8520498 8520729 -242167125 - AluJo SINE Alu -22 290 76 1930 203 19 7 chr2 8520739 8521158 -242166696 - L1MB4 LINE L1 -4 6176 5753 245 293 0 40 chr2 8521159 8521258 -242166596 - MLT1F LTR MaLR -444 98 4 237 337 105 0 chr2 8521286 8521381 -242166473 + L2 LINE L2 3186 3290 -23 286 197 15 45 chr2 8521543 8521609 -242166245 - MIR3 SINE MIR -18 190 127 547 218 0 8 chr2 8521619 8521743 -242166111 - MLT1C LTR MaLR -8 459 337 942 194 90 18 chr2 8521769 8522067 -242165787 - MLT1C LTR MaLR -155 412 85 257 189 0 0 chr2 8522084 8522137 -242165717 - Alu SINE Alu 0 308 256 204 313 109 0 chr2 8522719 8522847 -242165007 - L2 LINE L2 -274 2998 2857 889 214 92 56 chr2 8523433 8523792 -242164062 - L1MD2 LINE L1 -1 6358 5987 180 0 0 0 chr2 8523800 8523820 -242164034 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 401 24 0 176 chr2 8523820 8523858 -242163996 - MER41A LTR ERV1 -89 465 448 2220 94 37 13 chr2 8523858 8524157 -242163697 + AluSx SINE Alu 3 308 -4 401 24 0 176 chr2 8524157 8524198 -242163656 - MER41A LTR ERV1 -106 448 401 2089 206 20 15 chr2 8524203 8524660 -242163194 - L1MD2 LINE L1 -465 5894 5436 28 0 0 0 chr2 8526672 8526700 -242161154 + GC_rich Low_complexity Low_complexity 1 28 0 245 197 15 15 chr2 8527181 8527247 -242160607 + (CCG)n Simple_repeat Simple_repeat 3 68 0 30 97 0 0 chr2 8527269 8527362 -242160492 + GC_rich Low_complexity Low_complexity 1 93 0 183 108 216 0 chr2 8527605 8527642 -242160212 + MIR SINE MIR 210 254 -8 856 115 122 22 chr2 8527789 8527928 -242159926 - AluJb SINE Alu -159 153 1 3289 200 33 26 chr2 8528242 8528839 -242159015 + MER44D DNA MER2_type 1 477 -2010 1927 153 27 0 chr2 8528839 8529139 -242158715 + AluJb SINE Alu 1 308 -4 3289 200 33 26 chr2 8529139 8529261 -242158593 + MER44D DNA MER2_type 477 597 -8 981 192 52 5 chr2 8529460 8529653 -242158201 + AluJb SINE Alu 96 297 -15 247 240 93 0 chr2 8529803 8529878 -242157976 + MIR SINE MIR 113 194 -68 586 259 58 0 chr2 8530170 8530344 -242157510 + L1ME LINE L1 3850 4033 -2113 2510 80 0 0 chr2 8530593 8530893 -242156961 - AluY SINE Alu -11 300 1 418 121 0 0 chr2 8530894 8530960 -242156894 - MSTC LTR MaLR -66 362 297 343 108 15 62 chr2 8530941 8531006 -242156848 - MSTC LTR MaLR -366 62 1 * 426 315 70 38 chr2 8531032 8531195 -242156659 + L1ME4a LINE L1 5696 5869 -252 2159 97 34 27 chr2 8531195 8531493 -242156361 - AluSq SINE Alu -13 300 1 426 315 70 38 chr2 8531493 8531542 -242156312 + L1ME4a LINE L1 5869 5915 -206 2331 97 7 3 chr2 8532075 8532384 -242155470 - AluSg SINE Alu 0 310 1 277 282 42 6 chr2 8532386 8532550 -242155304 - LTR16C LTR ERVL -50 428 271 320 311 29 10 chr2 8532689 8532792 -242155062 + L1ME LINE L1 4960 5064 -1082 546 288 55 20 chr2 8532838 8533176 -242154678 + L1ME LINE L1 5293 5645 -476 2125 125 0 3 chr2 8533322 8533610 -242154244 - AluSx SINE Alu -25 287 1 898 82 0 0 chr2 8533619 8533729 -242154125 - AluSg/x SINE Alu -5 304 195 2744 26 0 3 chr2 8534266 8534571 -242153283 + AluY SINE Alu 1 304 -7 2259 89 43 6 chr2 8534574 8534924 -242152930 + L1MA3 LINE L1 5943 6305 0 236 204 204 19 chr2 8535544 8535652 -242152202 - MER3 DNA MER1_type 0 209 82 883 149 105 88 chr2 8535947 8536242 -242151612 + MER58D DNA MER1_type 4 303 -83 195 42 0 0 chr2 8536370 8536394 -242151460 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 2578 47 3 3 chr2 8536617 8536918 -242150936 - AluY SINE Alu -10 301 1 1793 146 30 4 chr2 8536986 8537253 -242150601 - AluSx SINE Alu -38 274 1 22 0 0 0 chr2 8537595 8537617 -242150237 + AT_rich Low_complexity Low_complexity 1 22 0 211 305 211 21 chr2 8539319 8539414 -242148440 - L2 LINE L2 -5 3267 3155 288 253 64 56 chr2 8539417 8539586 -242148268 - MIR SINE MIR -62 146 19 241 309 44 69 chr2 8540353 8540557 -242147297 + MIR3 SINE MIR 10 208 0 268 270 63 56 chr2 8540978 8541104 -242146750 - MIR3 SINE MIR -67 141 15 364 271 27 38 chr2 8541967 8542100 -242145754 + MIR SINE MIR 50 179 -59 271 246 16 0 chr2 8542301 8542362 -242145492 + L2 LINE L2 3208 3269 -3 2502 53 0 0 chr2 8543099 8543407 -242144447 - AluY SINE Alu 0 308 1 1634 173 30 23 chr2 8544017 8544317 -242143537 + AluSg SINE Alu 1 302 -8 231 236 14 42 chr2 8545026 8545098 -242142756 + MIR SINE MIR 37 106 -102 464 239 29 51 chr2 8545757 8545895 -242141959 + L2 LINE L2 3167 3301 -12 237 241 0 17 chr2 8545843 8545901 -242141953 + MIR SINE MIR 206 262 0 * 183 320 77 13 chr2 8546064 8546142 -242141712 + MIR SINE MIR 31 113 -95 1697 145 54 30 chr2 8546287 8546584 -242141270 - AluJb SINE Alu -8 304 1 1591 192 24 3 chr2 8546844 8547135 -242140719 - AluJo SINE Alu -15 297 1 328 305 250 6 chr2 8547572 8547736 -242140118 + MIR SINE MIR 47 250 -12 1887 113 8 0 chr2 8547969 8548226 -242139628 - AluSx SINE Alu -53 259 1 466 272 63 19 chr2 8548341 8548499 -242139355 - MLT1J2 LTR MaLR -284 166 2 545 247 97 53 chr2 8548499 8548726 -242139128 + L2 LINE L2 3045 3281 -32 183 80 0 0 chr2 8549064 8549089 -242138765 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 22 88 0 0 chr2 8549236 8549293 -242138561 + AT_rich Low_complexity Low_complexity 1 57 0 313 242 57 117 chr2 8549301 8549397 -242138457 + L1MC5 LINE L1 7688 7788 -173 2067 120 0 46 chr2 8549397 8549688 -242138166 + AluSq SINE Alu 5 281 -32 231 36 0 0 chr2 8549688 8549716 -242138138 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 2067 120 0 46 chr2 8549716 8549748 -242138106 + AluSq SINE Alu 281 313 0 313 242 57 117 chr2 8549748 8549915 -242137939 + L1MC5 LINE L1 7788 7935 -26 372 343 12 58 chr2 8550241 8550357 -242137497 - MIR3 SINE MIR -14 194 87 2277 115 3 10 chr2 8550357 8550669 -242137185 + AluSx SINE Alu 1 310 -2 372 343 12 58 chr2 8550669 8550724 -242137130 - MIR3 SINE MIR -121 87 31 1895 150 20 3 chr2 8551086 8551380 -242136474 - AluJb SINE Alu -13 299 1 442 316 102 45 chr2 8551398 8551642 -242136212 - MIR SINE MIR -4 258 1 213 108 0 0 chr2 8552147 8552184 -242135670 + (CA)n Simple_repeat Simple_repeat 1 37 0 2098 205 75 0 chr2 8552318 8552801 -242135053 + L1MB7 LINE L1 5657 6175 -9 341 253 175 32 chr2 8553022 8553176 -242134678 + MIR SINE MIR 27 202 -60 512 247 26 74 chr2 8553571 8553761 -242134093 - MIR SINE MIR -76 186 6 707 206 65 35 chr2 8553865 8554035 -242133819 - MER45A DNA AcHobo 0 178 4 522 103 0 23 chr2 8554699 8554786 -242133068 + MLT1C LTR MaLR 3 87 -380 295 137 0 0 chr2 8554999 8555050 -242132804 + Alu SINE Alu 246 296 -5 286 279 51 0 chr2 8556931 8557010 -242130844 - MIR SINE MIR -84 178 96 275 293 49 24 chr2 8558150 8558273 -242129581 + MIR SINE MIR 86 211 -51 822 133 0 8 chr2 8558817 8558937 -242128917 - FLAM_A SINE Alu -12 121 3 546 237 201 16 chr2 8559179 8559373 -242128481 - MIR SINE MIR -5 257 28 1868 175 3 0 chr2 8560700 8561015 -242126839 + AluSx SINE Alu 1 316 0 2363 98 0 0 chr2 8561808 8562104 -242125750 + AluSc SINE Alu 1 296 -13 633 275 55 22 chr2 8562170 8562352 -242125502 - MIR SINE MIR -1 261 74 355 267 48 0 chr2 8563213 8563318 -242124536 + MIR SINE MIR 56 165 -97 412 259 6 6 chr2 8563803 8563929 -242123925 - MIR SINE MIR -66 142 46 479 241 99 0 chr2 8564605 8564746 -242123108 + MLT1F1 LTR MaLR 411 565 -2 2366 94 0 3 chr2 8564901 8565199 -242122655 + AluSx SINE Alu 1 297 -15 2233 107 23 3 chr2 8565972 8566271 -242121583 + AluSp SINE Alu 1 305 -8 261 83 0 0 chr2 8566271 8566307 -242121547 + (GGAA)n Simple_repeat Simple_repeat 1 36 0 690 253 116 58 chr2 8567477 8567927 -242119927 + MLT1J LTR MaLR 28 503 -8 387 329 36 7 chr2 8567980 8568117 -242119737 - MIR3 SINE MIR -10 198 58 460 230 112 37 chr2 8568129 8568169 -242119685 + LTR33 LTR ERVL 16 52 -469 2046 109 31 7 chr2 8568169 8568462 -242119392 - AluSg1 SINE Alu -9 300 1 460 230 112 37 chr2 8568462 8568582 -242119272 + LTR33 LTR ERVL 52 188 -333 518 191 118 7 chr2 8569333 8569469 -242118385 - MER63 DNA MER1_type -53 783 7 217 333 53 0 chr2 8569537 8569612 -242118242 - MER5A DNA MER1_type -1 188 110 614 215 0 6 chr2 8569870 8570042 -242117812 + (TGGA)n Simple_repeat Simple_repeat 1 171 0 1023 81 0 0 chr2 8570157 8570281 -242117573 + AluSg/x SINE Alu 182 305 -7 322 218 24 135 chr2 8570464 8570634 -242117220 + LTR67 LTR ERVL 5 155 -402 462 246 42 7 chr2 8570794 8570936 -242116918 + LTR67 LTR ERVL 386 532 -25 2284 108 0 10 chr2 8571114 8571419 -242116435 + AluSg SINE Alu 3 304 -6 330 286 40 32 chr2 8571432 8571558 -242116296 - MER5A DNA MER1_type -19 170 44 329 234 175 44 chr2 8571436 8571573 -242116281 + MER5A DNA MER1_type 35 189 0 * 275 199 109 33 chr2 8571915 8572046 -242115808 - LTR33A LTR ERVL -287 234 69 227 306 122 0 chr2 8572165 8572263 -242115591 - MIR SINE MIR -69 139 30 412 230 11 46 chr2 8572693 8572780 -242115074 - MIR3 SINE MIR -54 154 71 598 111 0 0 chr2 8573114 8573204 -242114650 - MER41A LTR ERV1 0 554 465 4603 91 11 20 chr2 8574283 8574924 -242112930 - MER41B LTR ERV1 0 635 1 303 225 42 0 chr2 8575083 8575154 -242112700 + MER105 DNA DNA 1 74 -130 257 246 48 16 chr2 8575179 8575305 -242112549 + (CATA)n Simple_repeat Simple_repeat 2 131 0 680 269 52 70 chr2 8575308 8575646 -242112208 - LTR16A LTR ERVL -48 402 70 3266 160 17 91 chr2 8575646 8576391 -242111463 + LTR8 LTR ERV1 1 690 -1 680 269 52 70 chr2 8576391 8576439 -242111415 - LTR16A LTR ERVL -380 70 23 2444 193 77 50 chr2 8576462 8576821 -242111033 + L1ME1 LINE L1 4614 4962 -1184 748 157 0 25 chr2 8576821 8576966 -242110888 - FLAM_C SINE Alu 0 142 1 2444 193 77 50 chr2 8576966 8577366 -242110488 + L1ME1 LINE L1 4962 5396 -750 1712 199 10 16 chr2 8577360 8577746 -242110108 + L1ME1 LINE L1 5615 5998 -168 * 2172 130 0 3 chr2 8577859 8578160 -242109694 + AluSx SINE Alu 1 300 -12 2308 91 10 7 chr2 8578160 8578467 -242109387 + AluSg1 SINE Alu 1 308 -1 1639 188 57 39 chr2 8578621 8579004 -242108850 - MLT1B LTR MaLR 0 390 1 236 245 19 19 chr2 8579046 8579099 -242108755 + MIR SINE MIR 23 75 -133 341 229 73 68 chr2 8579134 8579326 -242108528 + MER117 DNA MER1_type 2 194 -3 2149 129 0 10 chr2 8579573 8579876 -242107978 + AluSx SINE Alu 1 300 -12 342 234 53 0 chr2 8579944 8580038 -242107816 - MER20 DNA MER1_type -57 162 64 400 173 146 45 chr2 8580399 8580509 -242107345 + MIR SINE MIR 29 149 -113 288 212 8 127 chr2 8580514 8580583 -242107271 + MLT1J LTR MaLR 1 53 -458 1924 156 0 0 chr2 8580583 8580913 -242106941 - AluSx SINE Alu 0 330 1 288 212 8 127 chr2 8580913 8580960 -242106894 + MLT1J LTR MaLR 53 104 -407 536 254 110 76 chr2 8580974 8581265 -242106589 + MLT1J LTR MaLR 205 505 -6 23 0 0 0 chr2 8581405 8581428 -242106426 + AT_rich Low_complexity Low_complexity 1 23 0 185 288 125 0 chr2 8581772 8581852 -242106002 - MIR SINE MIR -52 210 121 534 305 6 0 chr2 8581987 8582154 -242105700 - MER119 DNA MER1_type -290 293 126 23 33 0 0 chr2 8582261 8582291 -242105563 + AT_rich Low_complexity Low_complexity 1 30 0 676 152 27 18 chr2 8582291 8582403 -242105451 - FLAM_A SINE Alu -18 124 12 313 247 25 0 chr2 8582412 8582493 -242105361 - MER119 DNA MER1_type -496 87 5 2303 105 0 3 chr2 8582736 8583041 -242104813 - AluSq SINE Alu -9 304 1 524 216 0 8 chr2 8583113 8583247 -242104607 + (TG)n Simple_repeat Simple_repeat 2 134 0 1004 187 44 4 chr2 8583391 8583642 -242104212 + L1 LINE L1 4247 4507 -1639 422 314 24 8 chr2 8583720 8583844 -242104010 + HAL1 LINE L1 1255 1380 -1127 2201 126 0 3 chr2 8583849 8584150 -242103704 + AluSx SINE Alu 3 302 -10 427 169 79 11 chr2 8584253 8584342 -242103512 - LTR54 LTR ERV1 -373 137 43 341 163 174 0 chr2 8584343 8584435 -242103419 + HAL1 LINE L1 2097 2204 -303 472 214 0 0 chr2 8584454 8584543 -242103311 - LTR49 LTR ERV1 0 595 507 534 138 0 0 chr2 8584553 8584633 -242103221 + FLAM SINE Alu 42 121 -22 2106 121 29 10 chr2 8584657 8584963 -242102891 - AluSx SINE Alu 0 312 1 708 264 110 35 chr2 8585006 8585113 -242102741 - LTR48B LTR ERV1 -150 494 397 3500 128 56 0 chr2 8585113 8585612 -242102242 - MER1A DNA MER1_type 0 527 1 708 264 110 35 chr2 8585612 8585822 -242102032 - LTR48B LTR ERV1 -247 397 153 4550 57 37 11 chr2 8585822 8586838 -242101016 - MER11A LTR ERVK 0 1266 1 443 75 0 50 chr2 8586838 8586917 -242100937 - LTR48B LTR ERV1 -486 158 84 365 226 34 124 chr2 8587076 8587168 -242100686 + HAL1 LINE L1 2260 2359 -148 2063 155 0 0 chr2 8587168 8587458 -242100396 + AluJb SINE Alu 1 290 -22 365 226 34 124 chr2 8587458 8587631 -242100223 + HAL1 LINE L1 2359 2501 -6 2246 131 3 0 chr2 8587692 8587997 -242099857 + AluSx SINE Alu 1 306 -6 1093 261 65 21 chr2 8588137 8588462 -242099392 + MER58B DNA MER1_type 1 339 -2 463 325 33 0 chr2 8588495 8588646 -242099208 + MIR SINE MIR 51 206 -56 2527 80 0 0 chr2 8588997 8589299 -242098555 + AluSq SINE Alu 1 302 -11 242 254 58 56 chr2 8590043 8590215 -242097639 - MIR SINE MIR -62 146 17 354 23 0 0 chr2 8590822 8590865 -242096989 + (CA)n Simple_repeat Simple_repeat 2 44 0 423 279 11 49 chr2 8591926 8592109 -242095745 + (TATG)n Simple_repeat Simple_repeat 3 178 0 2127 135 7 0 chr2 8592731 8593035 -242094819 + AluSx SINE Alu 1 306 -6 709 265 109 73 chr2 8593071 8593512 -242094342 + L1MC4 LINE L1 7444 7900 -142 534 295 51 6 chr2 8593848 8594004 -242093850 + MIR SINE MIR 26 188 -74 300 239 0 28 chr2 8594067 8594149 -242093705 - MER5A DNA MER1_type -23 166 76 426 311 48 6 chr2 8594179 8594346 -242093508 + L2 LINE L2 2881 3054 -218 389 266 42 63 chr2 8594484 8594627 -242093227 - MIR SINE MIR -102 160 21 2348 93 7 3 chr2 8594714 8595016 -242092838 - AluSx SINE Alu -9 303 1 198 283 19 0 chr2 8596101 8596154 -242091700 + L2 LINE L2 2156 2209 -1105 2414 86 0 16 chr2 8596177 8596491 -242091363 + AluSx SINE Alu 1 309 -3 509 21 62 10 chr2 8596574 8596670 -242091184 + (CA)n Simple_repeat Simple_repeat 1 101 0 3857 96 26 100 chr2 8596670 8597387 -242090467 - MER4A LTR ERV1 0 664 1 240 35 0 0 chr2 8597387 8597416 -242090438 + (CA)n Simple_repeat Simple_repeat 2 30 0 330 313 104 21 chr2 8597662 8597806 -242090048 + MIR SINE MIR 22 177 -85 592 254 53 30 chr2 8597927 8598096 -242089758 + MIR SINE MIR 68 240 -22 183 300 169 53 chr2 8598755 8599092 -242088762 + L2 LINE L2 2213 2588 -726 238 191 0 0 chr2 8599130 8599177 -242088677 + MER58B DNA MER1_type 295 341 0 245 303 134 39 chr2 8599608 8599915 -242087939 - L1ME3A LINE L1 -223 5947 5612 255 247 92 53 chr2 8600001 8600163 -242087691 - L1ME3A LINE L1 -704 5452 5319 277 171 43 29 chr2 8600263 8600333 -242087521 - Charlie4 DNA MER1_type -1879 82 12 27 29 0 0 chr2 8600404 8600438 -242087416 + AT_rich Low_complexity Low_complexity 1 34 0 2043 103 19 39 chr2 8600974 8601145 -242086709 - AluJb SINE Alu -8 304 140 2386 108 0 0 chr2 8601145 8601452 -242086402 - AluSx SINE Alu -5 307 1 2043 103 19 39 chr2 8601452 8601590 -242086264 - AluJb SINE Alu -172 140 1 399 278 202 15 chr2 8601605 8601803 -242086051 - MIR SINE MIR -8 254 20 2468 75 0 3 chr2 8602299 8602605 -242085249 - AluY SINE Alu -6 305 1 201 264 99 11 chr2 8602652 8602743 -242085111 - MIR SINE MIR -12 250 152 358 202 58 18 chr2 8603309 8603437 -242084417 + MIR3 SINE MIR 60 196 -12 360 296 139 12 chr2 8604011 8604183 -242083671 + MIR3 SINE MIR 15 208 0 4596 173 54 22 chr2 8604401 8606001 -242081853 - L1MB7 LINE L1 -25 6159 4503 659 143 0 0 chr2 8606001 8606106 -242081748 - AluSg/x SINE Alu 0 309 205 280 156 0 6 chr2 8606106 8606165 -242081689 - Alu SINE Alu -263 40 1 1227 218 29 35 chr2 8606165 8606479 -242081375 - L1MB7 LINE L1 -1664 4482 4169 2292 48 44 24 chr2 8606479 8606773 -242081081 - AluY SINE Alu -5 306 7 1227 218 29 35 chr2 8606773 8606802 -242081052 - L1MB7 LINE L1 -1977 4169 4141 217 306 148 0 chr2 8609014 8609122 -242078732 + L2 LINE L2 3142 3265 -7 239 204 41 0 chr2 8609450 8609499 -242078355 + (TCCA)n Simple_repeat Simple_repeat 3 53 0 544 191 89 64 chr2 8609762 8609919 -242077935 + MER58C DNA MER1_type 43 203 -12 221 250 0 0 chr2 8611177 8611221 -242076633 + L3 LINE CR1 1532 1575 -2 218 308 63 25 chr2 8612235 8612368 -242075486 - MIR SINE MIR -65 143 18 502 326 39 11 chr2 8617218 8617396 -242070458 + L2 LINE L2 3130 3312 -1 309 283 18 53 chr2 8618276 8618389 -242069465 + MIR SINE MIR 12 120 -142 * 672 216 88 66 chr2 8618388 8618521 -242069333 - MIR SINE MIR -5 257 115 2460 96 0 0 chr2 8618521 8618824 -242069030 + AluSx SINE Alu 1 303 -9 672 216 88 66 chr2 8618824 8618917 -242068937 - MIR SINE MIR -147 115 26 276 322 67 31 chr2 8618865 8619089 -242068765 + MIR SINE MIR 7 242 -20 * 715 231 15 5 chr2 8620589 8620788 -242067066 + MER20 DNA MER1_type 19 219 0 21 0 0 0 chr2 8621319 8621340 -242066514 + AT_rich Low_complexity Low_complexity 1 21 0 205 184 0 0 chr2 8621358 8621396 -242066458 + (TATG)n Simple_repeat Simple_repeat 1 38 0 1641 146 4 4 chr2 8622012 8622266 -242065588 + AluJo SINE Alu 1 254 -58 216 359 35 78 chr2 8622335 8622416 -242065438 - L2 LINE L2 -538 2776 2693 2413 90 3 13 chr2 8622416 8622728 -242065126 + AluSg SINE Alu 1 309 -1 216 359 35 78 chr2 8622728 8622877 -242064977 - L2 LINE L2 -621 2693 2556 1229 160 9 5 chr2 8622912 8623124 -242064730 - MER4E LTR ERV1 0 779 567 * 1718 141 63 30 chr2 8623118 8623451 -242064403 - MER4B LTR ERV1 -266 344 1 268 158 368 11 chr2 8623456 8623551 -242064303 - MIR SINE MIR -66 196 68 529 193 28 0 chr2 8624583 8624692 -242063162 - MIR SINE MIR -129 133 22 2166 123 41 0 chr2 8625813 8626155 -242061699 + THE1B LTR MaLR 2 357 -7 264 273 10 30 chr2 8626220 8626319 -242061535 + MLT1K LTR MaLR 492 588 0 241 263 14 111 chr2 8627049 8627106 -242060748 + MIR SINE MIR 11 56 -152 1676 192 0 10 chr2 8627106 8627414 -242060440 - AluJo SINE Alu -7 305 1 241 263 14 111 chr2 8627414 8627477 -242060377 + MIR SINE MIR 56 124 -84 872 159 0 0 chr2 8627644 8627776 -242060078 + AluJo SINE Alu 2 133 -169 2392 89 86 9 chr2 8627790 8628128 -242059726 + THE1B LTR MaLR 1 364 0 858 160 0 75 chr2 8628130 8628276 -242059578 + AluJo SINE Alu 140 261 -174 1079 73 11 17 chr2 8628276 8628454 -242059400 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 858 160 0 75 chr2 8628454 8628617 -242059237 + AluJo SINE Alu 261 435 0 255 266 152 0 chr2 8629860 8629939 -242057915 + MIR SINE MIR 57 147 -61 2043 139 3 19 chr2 8629958 8630268 -242057586 + AluSx SINE Alu 1 305 -7 194 244 24 0 chr2 8630277 8630318 -242057536 + MIR SINE MIR 218 259 -3 2313 71 3 3 chr2 8630872 8631187 -242056667 + AluY SINE Alu 1 315 0 1935 146 3 54 chr2 8631194 8631510 -242056344 + AluSx SINE Alu 1 300 -12 2382 105 0 3 chr2 8631754 8632067 -242055787 + AluSx SINE Alu 1 312 0 1576 175 91 4 chr2 8632123 8632397 -242055457 + AluJb SINE Alu 1 298 -14 190 333 63 16 chr2 8633170 8633296 -242054558 + MIR SINE MIR 120 251 -11 242 71 0 24 chr2 8633298 8633340 -242054514 + (TGAA)n Simple_repeat Simple_repeat 1 41 0 459 258 42 72 chr2 8633648 8633815 -242054039 - MER91B DNA MER1_type -11 179 18 1886 158 14 0 chr2 8633860 8634152 -242053702 + AluJo SINE Alu 1 296 -16 436 296 206 7 chr2 8634700 8635001 -242052853 + L2 LINE L2 2912 3272 0 459 316 56 71 chr2 8635083 8635476 -242052378 - L2 LINE L2 -508 2806 2420 2462 73 3 0 chr2 8636832 8637132 -242050722 - AluY SINE Alu -10 301 1 2103 137 20 7 chr2 8637140 8637440 -242050414 - AluJb SINE Alu -8 304 1 206 265 20 0 chr2 8638235 8638284 -242049570 + L2 LINE L2 3194 3243 -29 639 39 0 0 chr2 8638666 8638744 -242049110 + (TC)n Simple_repeat Simple_repeat 1 78 0 4946 108 3 3 chr2 8638995 8639682 -242048172 - L1PA10 LINE L1 -1 6167 5481 2150 128 10 6 chr2 8639682 8639994 -242047860 - AluSp SINE Alu 0 313 1 2091 131 3 10 chr2 8640082 8640388 -242047466 - AluSq SINE Alu -7 306 3 245 285 61 144 chr2 8640432 8640695 -242047159 - MIR SINE MIR -2 260 20 1746 157 51 40 chr2 8640765 8640824 -242047030 - L1MB8 LINE L1 -9 6169 6112 1671 194 3 7 chr2 8640824 8641134 -242046720 + AluJo SINE Alu 1 309 -3 1746 157 51 40 chr2 8641134 8641449 -242046405 - L1MB8 LINE L1 -66 6112 5791 2510 169 38 0 chr2 8641450 8641893 -242045961 + MLT1C LTR MaLR 3 462 -5 2852 149 45 79 chr2 8641893 8642208 -242045646 - L1MB8 LINE L1 -401 5783 5459 2263 117 42 28 chr2 8642208 8642419 -242045435 - THE1B LTR MaLR 0 364 144 1860 140 0 13 chr2 8642419 8642727 -242045127 + AluSc SINE Alu 1 304 -5 2263 117 42 28 chr2 8642727 8642874 -242044980 - THE1B LTR MaLR -220 144 1 2852 149 45 79 chr2 8642874 8643114 -242044740 - L1MB8 LINE L1 -725 5459 5262 2120 114 0 16 chr2 8643114 8643431 -242044423 + AluJb SINE Alu 1 312 0 2852 149 45 79 chr2 8643431 8643560 -242044294 - L1MB8 LINE L1 -922 5262 5130 281 300 9 55 chr2 8643587 8643697 -242044157 + L2 LINE L2 2642 2746 -568 574 40 0 0 chr2 8643713 8643787 -242044067 + AluJb SINE Alu 209 282 -30 281 26 0 26 chr2 8643790 8643829 -242044025 + (CAAA)n Simple_repeat Simple_repeat 2 39 0 991 284 81 45 chr2 8643861 8644344 -242043510 + L2 LINE L2 2812 3311 -2 442 267 240 0 chr2 8644550 8644696 -242043158 - MER5A DNA MER1_type 0 189 9 328 266 55 37 chr2 8645042 8645151 -242042703 - L2 LINE L2 -4 3309 3199 240 377 51 0 chr2 8645519 8645657 -242042197 - L2 LINE L2 -238 3034 2890 1260 204 96 16 chr2 8645767 8646081 -242041773 - MER58B DNA MER1_type -2 339 1 2615 177 33 124 chr2 8646643 8646976 -242040878 + MER63C DNA MER1_type 1 226 -834 2739 13 3 0 chr2 8646976 8647289 -242040565 + AluYb8 SINE Alu 1 314 -4 2615 177 33 124 chr2 8647289 8647718 -242040136 + MER63C DNA MER1_type 226 693 -237 344 256 13 0 chr2 8647724 8647802 -242040052 + MER63C DNA MER1_type 853 931 0 2480 58 0 0 chr2 8648203 8648513 -242039341 - AluY SINE Alu -1 310 1 228 107 18 36 chr2 8649069 8649125 -242038729 + (TTCTCC)n Simple_repeat Simple_repeat 5 59 0 21 0 0 0 chr2 8649125 8649146 -242038708 + AT_rich Low_complexity Low_complexity 1 21 0 1081 183 47 21 chr2 8649146 8649381 -242038473 - MER46C DNA MER2_type 0 338 98 212 245 0 0 chr2 8650729 8650778 -242037076 + CT-rich Low_complexity Low_complexity 3 51 0 201 304 52 61 chr2 8650923 8651038 -242036816 + MIR SINE MIR 23 136 -126 25 75 0 0 chr2 8651325 8651378 -242036476 + GC_rich Low_complexity Low_complexity 1 53 0 1529 77 5 0 chr2 8651534 8651729 -242036125 + AluSp SINE Alu 104 299 -14 214 200 0 0 chr2 8651927 8651967 -242035887 + T-rich Low_complexity Low_complexity 1 40 0 249 382 49 16 chr2 8652698 8652821 -242035033 - L2 LINE L2 -21 3251 3125 197 254 127 0 chr2 8653123 8653178 -242034676 + L2 LINE L2 2433 2494 -820 404 130 101 0 chr2 8653257 8653326 -242034528 - Charlie5 DNA MER1_type -2527 85 10 265 180 20 0 chr2 8653347 8653397 -242034457 + MER5A DNA MER1_type 42 92 -97 443 265 119 13 chr2 8653463 8653614 -242034240 - MER5B DNA MER1_type -11 167 1 * 1059 263 95 39 chr2 8653614 8654246 -242033608 - L2 LINE L2 -141 3172 2496 2160 108 0 6 chr2 8654783 8655097 -242032757 - AluSx SINE Alu 0 312 1 186 351 52 0 chr2 8655241 8655318 -242032536 - L2 LINE L2 -1 3312 3232 189 0 0 0 chr2 8655335 8655356 -242032498 + (A)n Simple_repeat Simple_repeat 1 21 0 726 202 74 15 chr2 8655429 8655543 -242032311 - Charlie4 DNA MER1_type -7 1954 1848 1415 166 109 22 chr2 8655543 8655863 -242031991 - MER7A DNA MER2_type 0 346 1 726 202 74 15 chr2 8655863 8655951 -242031903 - Charlie4 DNA MER1_type -113 1848 1740 180 0 0 0 chr2 8705955 8705975 -241981879 + (A)n Simple_repeat Simple_repeat 1 20 0 1760 146 42 17 chr2 8706605 8706892 -241980962 - AluJb SINE Alu -18 294 1 291 253 30 64 chr2 8707128 8707229 -241980625 + MIR SINE MIR 9 107 -101 2084 170 15 15 chr2 8707229 8707618 -241980236 + MLT1B LTR MaLR 1 389 -1 291 253 30 64 chr2 8707618 8707634 -241980220 + MIR SINE MIR 107 122 -86 561 221 69 35 chr2 8707783 8707928 -241979926 + MLT1E3 LTR MaLR 473 622 -2 2311 91 3 0 chr2 8708375 8708661 -241979193 + AluSp SINE Alu 1 287 -26 1669 175 27 3 chr2 8709633 8709925 -241977929 - AluJo SINE Alu 0 312 14 198 0 0 0 chr2 8710033 8710055 -241977799 + (T)n Simple_repeat Simple_repeat 1 22 0 2362 102 0 3 chr2 8710196 8710501 -241977353 - AluSg SINE Alu -6 304 1 209 228 0 35 chr2 8711181 8711238 -241976616 + C-rich Low_complexity Low_complexity 2 56 0 2029 125 10 29 chr2 8711507 8711818 -241976036 + AluSq SINE Alu 1 305 -8 223 253 46 46 chr2 8712101 8712188 -241975666 + L2 LINE L2 3167 3253 -19 491 249 166 16 chr2 8712212 8712405 -241975449 + MIR SINE MIR 4 225 -37 2323 113 0 0 chr2 8712507 8712808 -241975046 + AluSx SINE Alu 1 301 -11 1424 140 0 18 chr2 8713370 8713592 -241974262 + AluSg/x SINE Alu 74 291 -19 627 169 115 8 chr2 8713595 8713725 -241974129 - FAM SINE Alu -34 151 8 2271 149 95 2 chr2 8713735 8714158 -241973696 - L1MC1 LINE L1 -179 6154 5693 2418 93 10 0 chr2 8714162 8714472 -241973382 + AluSq SINE Alu 1 313 0 1723 124 30 65 chr2 8714475 8714647 -241973207 - L1MC1 LINE L1 -752 5592 5436 698 191 0 16 chr2 8714647 8714773 -241973081 - FLAM_A SINE Alu -9 124 1 1723 124 30 65 chr2 8714773 8714939 -241972915 - L1MC1 LINE L1 -908 5436 5266 28 0 0 0 chr2 8714943 8714971 -241972883 + AT_rich Low_complexity Low_complexity 1 28 0 857 137 0 8 chr2 8714971 8715095 -241972759 - AluJb SINE Alu -189 123 1 251 245 0 0 chr2 8715095 8715164 -241972690 - L1MC1 LINE L1 -870 5276 5208 1806 132 0 28 chr2 8715202 8715490 -241972364 + AluSx SINE Alu 31 310 -2 385 287 131 48 chr2 8715499 8715966 -241971888 + MLT1L LTR MaLR 6 615 0 832 247 133 7 chr2 8715969 8716277 -241971577 + HAL1 LINE L1 1423 1769 -738 189 0 0 0 chr2 8716964 8716985 -241970869 + (A)n Simple_repeat Simple_repeat 1 21 0 2044 131 0 3 chr2 8717459 8717781 -241970073 + AluSx SINE Alu 1 321 0 2011 128 6 39 chr2 8717889 8718201 -241969653 + AluSx SINE Alu 1 302 -10 929 164 30 0 chr2 8718517 8718682 -241969172 - AluJb SINE Alu -14 298 129 282 270 33 53 chr2 8719418 8719570 -241968284 - MER5B DNA MER1_type 0 178 30 2196 96 0 3 chr2 8720085 8720378 -241967476 - AluSx SINE Alu 0 312 21 811 166 13 19 chr2 8721057 8721081 -241966773 - AluJb SINE Alu -20 292 269 1767 170 70 23 chr2 8721081 8721511 -241966343 - LTR7 LTR ERV1 0 450 1 811 166 13 19 chr2 8721511 8721643 -241966211 - AluJb SINE Alu -43 269 137 292 80 40 40 chr2 8722029 8722079 -241965775 - L1MC5 LINE L1 -172 7789 7740 202 250 198 10 chr2 8722167 8722263 -241965591 - MIR SINE MIR -112 150 37 244 295 139 29 chr2 8724027 8724308 -241963546 + L1ME4a LINE L1 5282 5593 -528 2303 104 16 0 chr2 8724504 8724812 -241963042 - AluSq SINE Alu 0 313 1 521 265 56 38 chr2 8724884 8724946 -241962908 + L1ME4a LINE L1 5812 5871 -250 1336 162 116 8 chr2 8724946 8725205 -241962649 + AluJo SINE Alu 1 287 -25 521 265 56 38 chr2 8725205 8725429 -241962425 + L1ME4a LINE L1 5871 6103 -18 447 275 111 19 chr2 8725497 8725704 -241962150 - MIR SINE MIR -17 245 20 685 217 0 8 chr2 8726571 8726700 -241961154 + MER8 DNA MER2_type 112 239 0 2256 94 13 3 chr2 8726733 8727032 -241960822 - AluSx SINE Alu -8 304 3 497 283 53 0 chr2 8727211 8727363 -241960491 - MIR SINE MIR -84 178 19 955 158 22 27 chr2 8727963 8728146 -241959708 - AluJo SINE Alu -24 288 107 938 276 79 3 chr2 8729707 8730076 -241957778 + L1ME1 LINE L1 5550 5946 -220 1865 113 68 0 chr2 8730078 8730343 -241957511 + AluSx SINE Alu 1 283 -29 201 190 139 63 chr2 8731122 8731201 -241956653 - MIR3 SINE MIR -22 186 102 2203 120 0 3 chr2 8731252 8731552 -241956302 + AluSq SINE Alu 1 299 -14 1831 154 0 34 chr2 8731656 8731954 -241955900 + AluJo SINE Alu 1 288 -24 414 0 0 0 chr2 8732495 8732541 -241955313 + (TG)n Simple_repeat Simple_repeat 1 46 0 1101 175 159 36 chr2 8732566 8732817 -241955037 - AluJo SINE Alu -30 282 1 2456 76 3 0 chr2 8734378 8734682 -241953172 + AluSg SINE Alu 1 305 -5 1637 188 20 10 chr2 8734691 8734984 -241952870 + AluJb SINE Alu 1 296 -16 2155 109 3 16 chr2 8734984 8735296 -241952558 + AluSc SINE Alu 1 308 -1 2150 112 14 3 chr2 8735305 8735601 -241952253 + AluSc SINE Alu 2 300 -9 22 0 0 0 chr2 8736240 8736262 -241951592 + AT_rich Low_complexity Low_complexity 1 22 0 252 0 0 0 chr2 8736562 8736590 -241951264 + (CCTG)n Simple_repeat Simple_repeat 4 31 0 263 216 49 59 chr2 8736863 8736965 -241950889 + L1MC4a LINE L1 5802 5902 -1906 23 0 0 0 chr2 8738362 8738385 -241949469 + AT_rich Low_complexity Low_complexity 1 23 0 998 133 96 21 chr2 8738407 8738595 -241949259 + Tigger2a DNA MER2_type 1 202 -232 948 172 17 22 chr2 8738595 8738775 -241949079 - AluJo SINE Alu -13 299 121 1205 117 40 85 chr2 8738775 8738941 -241948913 + Tigger2a DNA MER2_type 209 362 -2356 1376 177 89 7 chr2 8738941 8739212 -241948642 + AluJo SINE Alu 1 293 -19 1205 117 40 85 chr2 8739212 8739292 -241948562 + Tigger2a DNA MER2_type 362 444 0 1129 147 0 0 chr2 8739874 8740037 -241947817 + AluSg/x SINE Alu 135 297 -13 2000 134 0 3 chr2 8741234 8741539 -241946315 + AluSx SINE Alu 1 304 0 30 69 0 0 chr2 8741690 8741748 -241946106 + AT_rich Low_complexity Low_complexity 1 58 0 1740 129 4 0 chr2 8741761 8742001 -241945853 + AluSx SINE Alu 1 241 -71 252 0 0 0 chr2 8742004 8742032 -241945822 + (CAAAA)n Simple_repeat Simple_repeat 3 30 0 365 261 59 17 chr2 8742976 8743095 -241944759 - L2 LINE L2 0 3313 3190 3349 160 75 60 chr2 8743401 8743888 -241943966 + L1MB7 LINE L1 5378 5856 -328 2165 121 0 3 chr2 8743888 8744186 -241943668 + AluSx SINE Alu 1 297 -15 3349 160 75 60 chr2 8744186 8744410 -241943444 + L1MB7 LINE L1 5856 6075 -109 1905 118 29 4 chr2 8744410 8744689 -241943165 + AluSx SINE Alu 2 287 -25 207 0 0 0 chr2 8744690 8744713 -241943141 + (CA)n Simple_repeat Simple_repeat 2 24 0 3349 160 75 60 chr2 8744713 8744784 -241943070 + L1MB7 LINE L1 6074 6175 -9 315 311 107 0 chr2 8744841 8744944 -241942910 - L3 LINE CR1 -3 1574 1461 309 296 165 11 chr2 8745015 8745191 -241942663 + MIR SINE MIR 2 204 -58 517 290 36 44 chr2 8745314 8745562 -241942292 + L1MC4 LINE L1 7657 7902 -140 2110 138 0 0 chr2 8745675 8745973 -241941881 - AluSx SINE Alu -9 303 6 1060 104 0 0 chr2 8746006 8746140 -241941714 + AluSg SINE Alu 1 134 -176 2219 114 0 0 chr2 8746140 8746438 -241941416 + AluSx SINE Alu 1 298 -14 1501 183 13 50 chr2 8746536 8746837 -241941017 + AluJo SINE Alu 1 290 -22 658 183 0 0 chr2 8746962 8747066 -241940788 - U13 snRNA snRNA 0 104 1 1578 175 7 54 chr2 8747209 8747506 -241940348 - AluJo SINE Alu -29 283 1 2148 130 0 0 chr2 8747629 8747922 -241939932 + AluSg SINE Alu 1 293 -17 2218 110 3 0 chr2 8747987 8748286 -241939568 + AluSc SINE Alu 1 300 -9 236 238 183 55 chr2 8748340 8748504 -241939350 + MLT1J1 LTR MaLR 23 207 -239 291 200 158 11 chr2 8748539 8748634 -241939220 + MLT1J2 LTR MaLR 305 413 -37 2033 131 0 7 chr2 8748807 8749105 -241938749 + AluSc SINE Alu 1 296 -13 1091 138 0 0 chr2 8749105 8749280 -241938574 + AluSg/x SINE Alu 132 306 0 359 257 6 80 chr2 8749306 8749481 -241938373 + L1ME4a LINE L1 5851 6012 -109 26 0 0 0 chr2 8750650 8750676 -241937178 + AT_rich Low_complexity Low_complexity 1 26 0 193 270 0 0 chr2 8751913 8751950 -241935904 - L2 LINE L2 -18 3254 3218 * 417 290 18 38 chr2 8751938 8752094 -241935760 - MIR SINE MIR -62 146 12 2112 87 45 0 chr2 8752171 8752458 -241935396 + AluY SINE Alu 1 300 -11 883 73 0 33 chr2 8752596 8752747 -241935107 + (GGGGA)n Simple_repeat Simple_repeat 4 149 0 2394 72 0 26 chr2 8753830 8754134 -241933720 - AluY SINE Alu -15 296 1 324 312 163 16 chr2 8754451 8754651 -241933203 + MIR SINE MIR 4 230 -32 449 263 85 0 chr2 8754994 8755112 -241932742 + MIR SINE MIR 2 129 -133 1088 265 66 55 chr2 8755290 8755940 -241931914 + L1MC4a LINE L1 5175 5403 -743 2236 124 0 3 chr2 8756000 8756314 -241931540 + AluSq SINE Alu 1 313 0 1984 137 17 3 chr2 8756477 8756777 -241931077 + AluSx SINE Alu 1 304 -8 850 178 8 0 chr2 8756977 8757106 -241930748 + FLAM_C SINE Alu 1 130 -3 1936 140 16 13 chr2 8757408 8757716 -241930138 - AluSx SINE Alu -3 309 1 1927 151 84 6 chr2 8758408 8758765 -241929089 + L1MA4 LINE L1 5915 6299 -1 263 274 0 0 chr2 8758845 8758907 -241928947 + HAL1 LINE L1 578 639 -1868 1862 113 60 0 chr2 8758976 8759242 -241928612 + AluSx SINE Alu 1 282 -30 2178 94 3 7 chr2 8759263 8759560 -241928294 + AluSc SINE Alu 1 296 -13 956 231 16 0 chr2 8759815 8760001 -241927853 + MER5A DNA MER1_type 1 189 0 2208 113 3 3 chr2 8760005 8760307 -241927547 + AluSq SINE Alu 1 302 -11 373 327 47 57 chr2 8760327 8760530 -241927324 + L1ME4a LINE L1 5653 5854 -267 1939 149 0 13 chr2 8760530 8760838 -241927016 + AluJo SINE Alu 1 304 -8 373 327 47 57 chr2 8760838 8760931 -241926923 + L1ME4a LINE L1 5854 5946 -175 1898 129 11 4 chr2 8761431 8761710 -241926144 - AluSc SINE Alu -14 295 15 229 175 0 62 chr2 8761818 8761898 -241925956 + T-rich Low_complexity Low_complexity 3 77 0 248 263 150 0 chr2 8761976 8762056 -241925798 - L2 LINE L2 -6 3307 3216 1768 152 0 61 chr2 8762484 8762813 -241925041 + AluJo SINE Alu 1 309 -3 1647 130 8 16 chr2 8762813 8763066 -241924788 + AluSx SINE Alu 46 296 -16 230 309 32 11 chr2 8763068 8763162 -241924692 - L2 LINE L2 -620 2694 2599 2159 112 0 13 chr2 8763807 8764110 -241923744 + AluSg SINE Alu 1 299 -11 1735 147 51 17 chr2 8764242 8764535 -241923319 - AluJb SINE Alu -9 303 1 2247 117 3 0 chr2 8765153 8765461 -241922393 - AluSx SINE Alu -3 309 1 1994 113 10 52 chr2 8765493 8765802 -241922052 + AluSx SINE Alu 1 296 -16 209 258 371 0 chr2 8765809 8765906 -241921948 - L2 LINE L2 -960 2354 2222 2344 120 78 12 chr2 8766030 8766190 -241921664 - Tigger4(Zombi) DNA MER2_type 0 2731 2583 2441 60 0 0 chr2 8766190 8766474 -241921380 - AluY SINE Alu -27 284 1 2344 120 78 12 chr2 8766474 8766721 -241921133 - Tigger4(Zombi) DNA MER2_type -148 2583 2297 397 134 224 0 chr2 8766723 8766790 -241921064 - Tigger4(Zombi) DNA MER2_type -2647 84 3 226 97 97 97 chr2 8767551 8767623 -241920231 + Charlie2b DNA MER1_type 1365 1436 -1346 2424 89 0 3 chr2 8768107 8768421 -241919433 + AluSp SINE Alu 1 313 0 2265 92 0 3 chr2 8768497 8768790 -241919064 + AluSg SINE Alu 1 292 -18 427 274 101 48 chr2 8771307 8771515 -241916339 + MIR SINE MIR 6 224 -38 283 253 44 22 chr2 8771895 8771986 -241915868 + MIR SINE MIR 55 147 -61 1605 181 32 0 chr2 8772248 8772525 -241915329 - AluJb SINE Alu -20 292 7 2428 64 0 7 chr2 8772561 8772857 -241914997 - AluY SINE Alu -17 294 1 1001 180 41 23 chr2 8773098 8773270 -241914584 - FAM SINE Alu 0 175 1 1668 171 46 0 chr2 8773281 8773562 -241914292 - AluJb SINE Alu -18 294 1 1233 169 106 0 chr2 8773657 8773893 -241913961 - Tigger3(Golem) DNA MER2_type -8 3021 2761 2325 105 0 0 chr2 8774035 8774339 -241913515 + AluSq SINE Alu 1 304 -9 24 0 0 0 chr2 8774794 8774818 -241913036 + AT_rich Low_complexity Low_complexity 1 24 0 2253 97 6 39 chr2 8775163 8775338 -241912516 - AluSx SINE Alu 0 302 140 2121 125 7 10 chr2 8775338 8775505 -241912349 - AluSx SINE Alu -9 303 136 2130 115 0 7 chr2 8775505 8775800 -241912054 - AluSg SINE Alu -17 293 1 2121 125 7 10 chr2 8775800 8775936 -241911918 - AluSx SINE Alu -176 136 1 2253 97 6 39 chr2 8775936 8776071 -241911783 - AluSx SINE Alu -162 140 2 2422 79 3 16 chr2 8776287 8776604 -241911250 + AluSq SINE Alu 1 313 0 1817 166 46 0 chr2 8776859 8777184 -241910670 + MER47A DNA MER2_type 27 366 0 189 0 0 0 chr2 8778852 8778873 -241908981 + (CATA)n Simple_repeat Simple_repeat 4 24 0 1706 167 13 29 chr2 8778922 8779233 -241908621 + AluJo SINE Alu 1 306 -6 290 259 80 45 chr2 8779380 8779492 -241908362 + L3 LINE CR1 1238 1353 -224 2306 100 3 0 chr2 8781785 8782086 -241905768 + AluSq SINE Alu 1 302 -11 1563 173 26 48 chr2 8782122 8782434 -241905420 + AluJo SINE Alu 1 305 -7 1981 120 7 0 chr2 8782607 8782883 -241904971 + AluSp SINE Alu 10 287 -26 22 0 0 0 chr2 8782883 8782905 -241904949 + AT_rich Low_complexity Low_complexity 1 22 0 255 325 122 57 chr2 8785091 8785426 -241902428 - L2 LINE L2 0 3272 2916 404 245 0 10 chr2 8785457 8785559 -241902295 + MER5C DNA MER1_type 55 155 -169 2266 101 3 3 chr2 8785740 8786046 -241901808 + AluSg SINE Alu 1 306 -4 380 252 56 0 chr2 8786101 8786208 -241901646 + MIR SINE MIR 149 261 -1 1943 85 114 7 chr2 8786533 8786805 -241901049 - AluSg SINE Alu -9 301 1 1522 148 13 62 chr2 8786849 8787154 -241900700 + AluJo SINE Alu 15 304 -8 40 37 0 0 chr2 8787166 8787220 -241900634 + AT_rich Low_complexity Low_complexity 1 54 0 180 0 0 0 chr2 8787220 8787240 -241900614 + (CA)n Simple_repeat Simple_repeat 2 21 0 255 61 0 0 chr2 8787273 8787306 -241900548 + (CA)n Simple_repeat Simple_repeat 2 34 0 21 36 0 0 chr2 8787548 8787576 -241900278 + AT_rich Low_complexity Low_complexity 1 28 0 22 56 0 0 chr2 8788610 8788646 -241899208 + AT_rich Low_complexity Low_complexity 1 36 0 2086 129 24 0 chr2 8788719 8789014 -241898840 + AluSq SINE Alu 1 302 -11 780 165 44 25 chr2 8789997 8790155 -241897699 - AluSg/x SINE Alu -13 296 136 412 238 0 0 chr2 8790154 8790238 -241897616 - FRAM/FAM SINE Alu -92 84 1 * 2101 87 50 3 chr2 8790660 8790959 -241896895 + AluSq SINE Alu 1 313 0 2146 83 6 92 chr2 8791085 8791412 -241896442 - AluSq SINE Alu -14 299 1 2171 117 7 0 chr2 8791429 8791737 -241896117 - AluSx SINE Alu -1 311 2 417 273 43 50 chr2 8792781 8792920 -241894934 + MIR SINE MIR 2 139 -123 279 265 53 53 chr2 8793333 8793465 -241894389 + MIR SINE MIR 16 147 -61 1605 181 32 0 chr2 8793727 8794004 -241893850 - AluJb SINE Alu -20 292 7 2428 64 0 7 chr2 8794040 8794336 -241893518 - AluY SINE Alu -17 294 1 1001 180 41 23 chr2 8794577 8794749 -241893105 - FAM SINE Alu 0 175 1 1724 164 46 0 chr2 8794760 8795041 -241892813 - AluJb SINE Alu -18 294 1 1233 169 106 0 chr2 8795136 8795372 -241892482 - Tigger3(Golem) DNA MER2_type -8 3021 2761 2325 105 0 0 chr2 8795514 8795818 -241892036 + AluSq SINE Alu 1 304 -9 24 0 0 0 chr2 8796273 8796297 -241891557 + AT_rich Low_complexity Low_complexity 1 24 0 1990 98 59 0 chr2 8796640 8796927 -241890927 - AluSx SINE Alu -8 304 1 4249 146 38 122 chr2 8796971 8797378 -241890476 - MER21A LTR ERV1 -6 925 485 2179 108 27 0 chr2 8797378 8797673 -241890181 + AluSx SINE Alu 1 303 -9 4249 146 38 122 chr2 8797673 8798262 -241889592 - MER21A LTR ERV1 -446 485 13 1894 125 7 4 chr2 8798670 8798983 -241888871 - AluSq SINE Alu 0 314 1 2317 98 0 3 chr2 8799205 8799500 -241888354 - AluSq SINE Alu -14 299 6 1601 175 0 52 chr2 8799834 8799989 -241887865 - AluJo SINE Alu -24 288 153 2463 80 0 0 chr2 8799989 8800288 -241887566 - AluSg SINE Alu -11 299 1 1601 175 0 52 chr2 8800288 8800418 -241887436 - AluJo SINE Alu -159 153 18 286 218 154 13 chr2 8801164 8801242 -241886612 + L2 LINE L2 3184 3272 0 702 158 79 20 chr2 8801902 8802054 -241885800 + MER3 DNA MER1_type 1 161 -48 586 307 20 0 chr2 8802054 8802256 -241885598 + L1MB7 LINE L1 5970 6175 -9 339 232 11 21 chr2 8802326 8802421 -241885433 + L1MC5 LINE L1 7824 7917 -44 297 125 0 0 chr2 8802450 8802490 -241885364 + MER3 DNA MER1_type 160 199 -10 1845 166 27 0 chr2 8802665 8802960 -241884894 + AluJb SINE Alu 6 308 -4 27 0 0 0 chr2 8803136 8803163 -241884691 + AT_rich Low_complexity Low_complexity 1 27 0 2044 100 7 43 chr2 8803165 8803464 -241884390 - AluSx SINE Alu -24 288 1 1629 81 5 0 chr2 8804008 8804206 -241883648 + AluSc SINE Alu 1 199 -110 2306 100 3 0 chr2 8806450 8806751 -241881103 + AluSq SINE Alu 1 302 -11 1450 182 28 48 chr2 8806787 8807078 -241880776 + AluJo SINE Alu 1 285 -27 1981 120 7 0 chr2 8807270 8807546 -241880308 + AluSp SINE Alu 10 287 -26 22 0 0 0 chr2 8807546 8807568 -241880286 + AT_rich Low_complexity Low_complexity 1 22 0 255 325 122 57 chr2 8809754 8810089 -241877765 - L2 LINE L2 0 3272 2916 404 245 0 10 chr2 8810120 8810222 -241877632 + MER5C DNA MER1_type 55 155 -169 2266 101 3 3 chr2 8810403 8810709 -241877145 + AluSg SINE Alu 1 306 -4 391 243 56 0 chr2 8810764 8810871 -241876983 + MIR SINE MIR 149 261 -1 180 0 0 0 chr2 8811196 8811216 -241876638 + (T)n Simple_repeat Simple_repeat 1 20 0 1711 66 0 0 chr2 8811268 8811466 -241876388 - AluSc SINE Alu -109 200 3 997 124 0 0 chr2 8811591 8811720 -241876134 - FLAM_C SINE Alu 0 133 5 1888 152 0 20 chr2 8812272 8812568 -241875286 - AluSx SINE Alu -22 290 1 815 161 101 8 chr2 8812577 8812756 -241875098 - L1MD3 LINE L1 0 7995 7834 2193 112 7 0 chr2 8812756 8813052 -241874802 - AluSx SINE Alu -14 298 1 815 161 101 8 chr2 8813052 8813079 -241874775 - L1MD3 LINE L1 -161 7834 7562 1587 124 98 23 chr2 8813100 8813366 -241874488 + AluJo SINE Alu 1 286 -26 792 170 146 24 chr2 8813383 8813595 -241874259 - L1MB5 LINE L1 -2 6172 5935 461 148 44 23 chr2 8813567 8813656 -241874198 - L1MD3 LINE L1 -201 7794 7621 * 1827 121 4 0 chr2 8813689 8813938 -241873916 + AluSx SINE Alu 1 250 -62 1780 174 56 25 chr2 8814406 8814798 -241873056 + MLT1C LTR MaLR 12 415 -52 1799 137 6 37 chr2 8814817 8815139 -241872715 - AluJb SINE Alu 0 312 1 708 145 120 0 chr2 8816631 8816748 -241871106 + FLAM_C SINE Alu 1 131 -2 247 300 22 22 chr2 8816764 8816854 -241871000 + L1MB7 LINE L1 5558 5647 -474 2357 86 0 22 chr2 8816975 8817289 -241870565 - AluSq SINE Alu -6 307 1 247 264 57 89 chr2 8818520 8818800 -241869054 - L1M4 LINE L1 -644 5534 5264 374 279 107 62 chr2 8819034 8819278 -241868576 - L1M4 LINE L1 -3638 2508 2254 3772 172 41 20 chr2 8819294 8819999 -241867855 - L1MB8 LINE L1 0 6178 5459 2507 62 0 3 chr2 8820178 8820482 -241867372 + AluY SINE Alu 1 303 -8 231 114 0 0 chr2 8820750 8820785 -241867069 + (A)n Simple_repeat Simple_repeat 1 35 0 736 219 12 19 chr2 8820802 8820962 -241866892 + MER5A DNA MER1_type 28 186 -3 213 342 26 51 chr2 8821042 8821159 -241866695 - L2 LINE L2 -10 3262 3149 1698 171 3 13 chr2 8821548 8821852 -241866002 + AluJo SINE Alu 1 301 -11 234 311 185 44 chr2 8821854 8822337 -241865517 - L2 LINE L2 0 3313 2760 1947 123 7 20 chr2 8822951 8823251 -241864603 - AluSx SINE Alu -16 296 1 386 69 103 0 chr2 8827944 8828002 -241859852 - MADE1 DNA Mariner -15 65 2 1737 161 94 16 chr2 8828908 8829280 -241858574 + L1MB3 LINE L1 5773 6173 -10 1727 169 42 0 chr2 8829303 8829587 -241858267 + AluJo SINE Alu 1 296 -16 1750 178 44 0 chr2 8829587 8829908 -241857946 + L1MB7 LINE L1 5827 6161 -23 1297 188 26 48 chr2 8830151 8830460 -241857394 - AluJb SINE Alu -10 302 1 649 190 0 0 chr2 8831108 8831224 -241856630 + AluSg/x SINE Alu 194 309 0 35 0 0 0 chr2 8831234 8831269 -241856585 + AT_rich Low_complexity Low_complexity 1 35 0 625 203 79 57 chr2 8832592 8832769 -241855085 + Charlie1b DNA MER1_type 11 191 -332 225 88 88 0 chr2 8832825 8832859 -241854995 + Charlie1b DNA MER1_type 487 523 0 1653 197 100 39 chr2 8833245 8833357 -241854497 - L1ME2 LINE L1 0 6164 6060 4025 58 8 0 chr2 8833357 8833842 -241854012 + L1PA7 LINE L1 5666 6154 0 1653 197 100 39 chr2 8833842 8834241 -241853613 - L1ME2 LINE L1 -104 6060 5622 305 226 78 17 chr2 8834263 8834378 -241853476 - L1MC5 LINE L1 -52 7909 7788 257 261 225 42 chr2 8834900 8835042 -241852812 + L1ME LINE L1 5493 5660 -461 2185 99 7 0 chr2 8835138 8835446 -241852408 + AluSp SINE Alu 1 310 0 1815 144 46 0 chr2 8835633 8835917 -241851937 + AluJb SINE Alu 1 297 -15 664 212 51 78 chr2 8836138 8836355 -241851499 - MER20 DNA MER1_type 0 219 9 2103 110 14 7 chr2 8836398 8836690 -241851164 - AluSx SINE Alu -18 294 1 1394 107 0 5 chr2 8836735 8836922 -241850932 + AluSg/x SINE Alu 111 296 -16 669 279 109 5 chr2 8837202 8837403 -241850451 + MIR SINE MIR 37 258 -4 295 314 145 6 chr2 8837407 8837566 -241850288 - MIR SINE MIR -72 190 10 2160 95 17 7 chr2 8838083 8838377 -241849477 - AluSx SINE Alu -15 297 1 670 198 33 0 chr2 8839203 8839324 -241848530 + FLAM_C SINE Alu 9 133 -10 349 257 57 86 chr2 8839602 8839777 -241848077 + L2 LINE L2 3122 3291 -22 28 0 0 0 chr2 8842099 8842127 -241845727 + GC_rich Low_complexity Low_complexity 1 28 0 1226 22 0 0 chr2 8842281 8842419 -241845435 - L1PA5 LINE L1 -271 5883 5746 2237 94 19 7 chr2 8842490 8842799 -241845055 - AluSq SINE Alu 0 313 1 1755 108 44 4 chr2 8843474 8843724 -241844130 + AluSx SINE Alu 18 277 -35 252 0 0 0 chr2 8843728 8843756 -241844098 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 576 247 149 39 chr2 8844122 8844721 -241843133 + L1MEd LINE L1 991 1641 -4488 496 197 171 0 chr2 8845080 8845203 -241842651 + MIR SINE MIR 103 245 -17 2153 97 3 0 chr2 8845306 8845596 -241842258 - AluSp SINE Alu -22 291 1 21 0 0 0 chr2 8845601 8845622 -241842232 + AT_rich Low_complexity Low_complexity 1 21 0 1804 127 11 7 chr2 8846468 8846752 -241841102 - AluSx SINE Alu -23 289 5 198 355 79 62 chr2 8846838 8847193 -241840661 + L2 LINE L2 2460 2820 -494 718 57 67 9 chr2 8850054 8850159 -241837695 + HY1 scRNA scRNA 1 111 -1 184 264 287 0 chr2 8850599 8850686 -241837168 + MIR SINE MIR 20 131 -131 863 196 99 22 chr2 8850861 8851719 -241836135 + L1M3 LINE L1 4765 5763 -420 180 0 0 0 chr2 8851740 8851760 -241836094 + (TTTTG)n Simple_repeat Simple_repeat 5 24 0 863 152 96 63 chr2 8851892 8852162 -241835692 + L1MB3 LINE L1 5108 5386 -760 2116 154 112 49 chr2 8852180 8852418 -241835436 + L1MB3 LINE L1 5495 5717 -457 2177 73 0 7 chr2 8852418 8852726 -241835128 - AluY SINE Alu 0 306 1 2116 154 112 49 chr2 8852726 8853104 -241834750 + L1MB3 LINE L1 5717 6173 -1 1614 158 43 4 chr2 8853126 8853405 -241834449 + AluJo SINE Alu 6 295 -17 30 59 0 0 chr2 8853730 8853781 -241834073 + GC_rich Low_complexity Low_complexity 1 51 0 251 206 48 32 chr2 8854710 8854773 -241833081 + L2 LINE L2 3202 3265 -7 2032 99 0 18 chr2 8854838 8855120 -241832734 - AluSq SINE Alu -36 277 1 2270 86 3 0 chr2 8855331 8855634 -241832220 - AluSc SINE Alu -5 304 1 1381 168 97 8 chr2 8855635 8855903 -241831951 - AluJo SINE Alu -19 293 2 528 259 30 15 chr2 8855904 8855936 -241831918 - Charlie2 DNA MER1_type -34 2828 2798 2157 88 3 0 chr2 8855936 8856230 -241831624 + AluY SINE Alu 1 295 -16 528 259 30 15 chr2 8856230 8856394 -241831460 - Charlie2 DNA MER1_type -64 2798 2629 1065 188 156 71 chr2 8856395 8856859 -241830995 + MLT1F LTR MaLR 2 576 -17 2510 50 0 0 chr2 8857483 8857780 -241830074 - AluSc SINE Alu -10 299 3 952 124 0 0 chr2 8857905 8858034 -241829820 - FLAM_C SINE Alu 0 133 5 1792 156 0 20 chr2 8858580 8858882 -241828972 - AluSx SINE Alu -16 296 1 788 168 94 5 chr2 8858891 8859070 -241828784 - L1MD3 LINE L1 0 7995 7833 2089 110 3 0 chr2 8859070 8859361 -241828493 - AluSx SINE Alu -14 298 7 788 168 94 5 chr2 8859361 8859393 -241828461 - L1MD3 LINE L1 -162 7833 7562 1495 124 98 23 chr2 8859414 8859680 -241828174 + AluJo SINE Alu 1 286 -26 807 174 141 24 chr2 8859697 8859910 -241827944 - L1MB5 LINE L1 -2 6172 5935 470 133 44 23 chr2 8859882 8859971 -241827883 - L1MD3 LINE L1 -201 7794 7621 * 1784 120 0 0 chr2 8860004 8860254 -241827600 + AluSx SINE Alu 1 250 -62 1796 208 52 22 chr2 8860722 8861140 -241826714 + MLT1C LTR MaLR 12 563 -63 1708 143 6 22 chr2 8861140 8861455 -241826399 - AluJb SINE Alu -2 310 1 1796 208 52 22 chr2 8861455 8861521 -241826333 + MLT1C LTR MaLR 563 626 0 314 125 21 0 chr2 8861744 8861792 -241826062 - MLT1B LTR MaLR -63 327 279 1851 143 3 13 chr2 8861946 8862109 -241825745 - AluJb SINE Alu -15 297 137 2024 89 6 70 chr2 8862109 8862424 -241825430 - AluSx SINE Alu -17 295 1 1851 143 3 13 chr2 8862424 8862560 -241825294 - AluJb SINE Alu -175 137 1 1992 127 6 22 chr2 8863388 8863521 -241824333 + AluSx SINE Alu 1 135 -177 2096 102 17 0 chr2 8863521 8863816 -241824038 + AluSp SINE Alu 1 300 -13 1992 127 6 22 chr2 8863816 8863997 -241823857 + AluSx SINE Alu 135 310 -2 1748 128 25 75 chr2 8864001 8864322 -241823532 + AluJb SINE Alu 1 305 -7 984 213 126 12 chr2 8864628 8864882 -241822972 - AluSg1 SINE Alu -14 295 13 2298 81 0 7 chr2 8865182 8865490 -241822364 + AluY SINE Alu 1 306 -5 870 148 0 0 chr2 8865499 8865641 -241822213 + FLAM_C SINE Alu 1 142 -1 281 227 172 78 chr2 8865971 8866099 -241821755 - MIR3 SINE MIR -45 163 24 846 169 0 0 chr2 8866166 8866296 -241821558 - FLAM_C SINE Alu -3 130 1 1544 174 27 13 chr2 8866304 8866603 -241821251 - AluJo SINE Alu -9 303 1 1758 171 14 0 chr2 8866907 8867200 -241820654 + AluJb SINE Alu 1 297 -15 2184 94 0 3 chr2 8867204 8867503 -241820351 + AluSx SINE Alu 1 298 -14 191 36 36 0 chr2 8867509 8867537 -241820317 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 314 256 64 40 chr2 8867825 8867950 -241819904 - LTR67 LTR ERVL -2 555 428 1841 81 49 0 chr2 8868557 8868803 -241819051 - AluSg SINE Alu -14 296 39 648 125 0 0 chr2 8868803 8868891 -241818963 - AluSg/x SINE Alu -22 288 201 232 198 427 0 chr2 8868892 8868988 -241818866 + MIR SINE MIR 56 192 -70 232 233 0 0 chr2 8869066 8869109 -241818745 + L2 LINE L2 3264 3306 -7 1969 122 7 3 chr2 8869143 8869446 -241818408 - AluSx SINE Alu -8 304 1 2283 97 0 0 chr2 8869562 8869871 -241817983 + AluSg SINE Alu 1 309 -1 206 279 0 0 chr2 8869908 8869951 -241817903 - L2 LINE L2 -7 3306 3264 265 235 345 8 chr2 8870029 8870148 -241817706 - MIR SINE MIR -70 192 34 839 134 25 45 chr2 8871351 8871508 -241816346 - FAM SINE Alu -14 171 18 548 113 94 57 chr2 8871595 8871701 -241816153 + MER5A DNA MER1_type 1 110 -79 193 333 32 0 chr2 8872219 8872282 -241815572 + L2 LINE L2 3249 3313 0 2334 90 0 0 chr2 8872317 8872618 -241815236 - AluSx SINE Alu -9 303 3 801 151 0 0 chr2 8872853 8872972 -241814882 + FLAM_C SINE Alu 1 119 -24 1911 92 55 14 chr2 8873389 8873682 -241814172 - AluSq SINE Alu -6 307 3 2276 89 7 0 chr2 8873755 8874057 -241813797 - AluSg SINE Alu -6 304 1 2140 110 7 0 chr2 8874074 8874382 -241813472 - AluSx SINE Alu -1 311 2 309 245 57 99 chr2 8875149 8875341 -241812513 - L1MEd LINE L1 -5933 186 3 2193 100 0 3 chr2 8875466 8875775 -241812079 + AluY SINE Alu 1 308 -3 1988 117 7 32 chr2 8875972 8876281 -241811573 + AluSg SINE Alu 2 302 -8 2190 88 10 0 chr2 8876298 8876595 -241811259 + AluSg SINE Alu 1 300 -10 1358 113 0 0 chr2 8876741 8876936 -241810918 + AluSg/x SINE Alu 92 286 -24 310 255 43 11 chr2 8876947 8877041 -241810813 + L1MC4a LINE L1 5376 5472 -2336 198 0 0 0 chr2 8877041 8877063 -241810791 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 841 130 23 0 chr2 8877063 8877194 -241810660 - AluSq/x SINE Alu -178 134 1 314 249 37 21 chr2 8877207 8877322 -241810532 + L1MC4a LINE L1 5475 5591 -530 430 285 75 31 chr2 8877345 8877573 -241810281 + L1MC4a LINE L1 5705 5942 -1866 1822 145 3 6 chr2 8877616 8877927 -241809927 + AluSx SINE Alu 1 310 -2 1727 161 17 7 chr2 8878046 8878344 -241809510 + AluJb SINE Alu 5 305 -7 232 149 106 0 chr2 8878521 8878568 -241809286 - L2 LINE L2 -5 3308 3257 755 278 0 0 chr2 8878699 8878872 -241808982 + MER8 DNA MER2_type 5 177 -62 328 200 46 0 chr2 8878901 8878966 -241808888 + MER8 DNA MER2_type 172 239 0 26 0 0 0 chr2 8879277 8879303 -241808551 + AT_rich Low_complexity Low_complexity 1 26 0 659 208 129 102 chr2 8879354 8879540 -241808314 + MER20B DNA MER1_type 83 262 -521 1807 148 3 10 chr2 8879540 8879837 -241808017 - AluSx SINE Alu -17 295 1 659 208 129 102 chr2 8879837 8879903 -241807951 + MER20B DNA MER1_type 262 347 -436 1979 128 0 16 chr2 8879903 8880207 -241807647 + AluSx SINE Alu 1 299 -13 659 208 129 102 chr2 8880207 8880247 -241807607 + MER20B DNA MER1_type 347 384 -399 328 243 7 81 chr2 8880564 8880700 -241807154 + FLAM_C SINE Alu 8 133 0 288 0 0 0 chr2 8880720 8880752 -241807102 + (T)n Simple_repeat Simple_repeat 1 32 0 1214 164 74 4 chr2 8880758 8880989 -241806865 + AluJo SINE Alu 6 252 -60 1449 190 45 3 chr2 8881147 8881437 -241806417 - AluJo SINE Alu -10 302 1 1950 123 7 13 chr2 8881634 8881934 -241805920 + AluSx SINE Alu 1 298 -14 2045 107 10 23 chr2 8882093 8882402 -241805452 - AluSq SINE Alu -8 305 1 14032 129 35 26 chr2 8882495 8882847 -241805007 - Tigger1 DNA MER2_type -18 2400 2053 2258 100 7 0 chr2 8882847 8883157 -241804697 - AluSp SINE Alu -1 312 1 14032 129 35 26 chr2 8883157 8885183 -241802671 - Tigger1 DNA MER2_type -365 2053 1 928 89 16 0 chr2 8885450 8885573 -241802281 + AluSp SINE Alu 1 125 -188 28 0 0 0 chr2 8886278 8886306 -241801548 + GC_rich Low_complexity Low_complexity 1 28 0 27 92 0 0 chr2 8886530 8886606 -241801248 + GC_rich Low_complexity Low_complexity 1 76 0 186 186 23 23 chr2 8888690 8888733 -241799121 + MIR SINE MIR 85 127 -135 911 247 20 51 chr2 8888958 8889213 -241798641 - MIR SINE MIR -3 259 13 375 305 93 55 chr2 8889464 8889601 -241798253 + MIR SINE MIR 15 160 -102 1732 160 3 7 chr2 8889601 8889889 -241797965 + AluJb SINE Alu 1 287 -25 375 305 93 55 chr2 8889889 8889990 -241797864 + MIR SINE MIR 160 256 -6 1135 226 47 68 chr2 8890506 8890629 -241797225 + MLT2C2 LTR ERVL 2 126 -338 2215 109 0 0 chr2 8890629 8890932 -241796922 - AluSx SINE Alu -9 303 1 1135 226 47 68 chr2 8890932 8891237 -241796617 + MLT2C2 LTR ERVL 126 421 -43 2097 121 0 3 chr2 8891326 8891624 -241796230 - AluSx SINE Alu -15 297 1 210 37 0 0 chr2 8891720 8891747 -241796107 + (TTTG)n Simple_repeat Simple_repeat 3 29 0 214 340 123 9 chr2 8891789 8891895 -241795959 - MIR SINE MIR -108 154 37 313 262 78 10 chr2 8892589 8892692 -241795162 - L2 LINE L2 -4 3309 3200 814 209 47 29 chr2 8893807 8893979 -241793875 + MIR SINE MIR 8 182 -80 267 340 77 57 chr2 8894027 8894377 -241793477 + L2 LINE L2 2916 3272 0 726 241 63 130 chr2 8895519 8896088 -241791766 - LTR67 LTR ERVL -8 549 19 236 242 253 33 chr2 8896432 8896523 -241791331 - L2 LINE L2 0 3272 3162 186 322 111 30 chr2 8896557 8896756 -241791098 - L2 LINE L2 -264 3049 2835 2368 81 3 3 chr2 8896780 8897078 -241790776 + AluSg SINE Alu 1 298 -12 894 135 0 8 chr2 8897160 8897293 -241790561 - FLAM_C SINE Alu -1 132 1 1300 139 17 13 chr2 8897387 8897617 -241790237 - L1MB3 LINE L1 -2 6181 5951 2376 116 0 0 chr2 8897854 8898165 -241789689 - AluSx SINE Alu -1 311 1 501 264 184 20 chr2 8898524 8898725 -241789129 + MIR SINE MIR 23 256 -6 2454 87 0 0 chr2 8898807 8899117 -241788737 - AluY SINE Alu -1 310 1 1170 46 0 0 chr2 8899120 8899251 -241788603 - AluY SINE Alu -179 132 2 243 292 15 15 chr2 8900273 8900338 -241787516 + L2 LINE L2 3237 3301 -12 2613 56 0 0 chr2 8901697 8901999 -241785855 + AluY SINE Alu 1 302 -9 260 240 56 64 chr2 8902306 8902431 -241785423 + L2 LINE L2 3137 3260 -12 385 306 68 88 chr2 8902841 8903250 -241784604 - L2 LINE L2 -46 3226 2826 449 290 16 24 chr2 8903448 8903572 -241784282 - MIR SINE MIR -63 145 23 320 333 26 0 chr2 8904395 8904509 -241783345 + MIR SINE MIR 4 120 -142 21 0 0 0 chr2 8904509 8904530 -241783324 + AT_rich Low_complexity Low_complexity 1 21 0 502 186 41 10 chr2 8904551 8904648 -241783206 + MER33 DNA MER1_type 10 109 -215 470 290 101 63 chr2 8904882 8905120 -241782734 + MIR SINE MIR 16 262 0 251 259 0 0 chr2 8905360 8905414 -241782440 - LTR33 LTR ERVL -358 163 110 1303 133 282 0 chr2 8905414 8905655 -241782199 + AluSg1 SINE Alu 1 309 0 2374 119 0 0 chr2 8905672 8905984 -241781870 + AluSx SINE Alu 1 312 0 326 243 19 19 chr2 8905984 8906084 -241781770 - LTR33 LTR ERVL -398 123 21 564 332 21 0 chr2 8906103 8906290 -241781564 + MIR3 SINE MIR 5 195 -13 1594 177 141 52 chr2 8906298 8906783 -241781071 + L1MB7 LINE L1 5359 5889 -295 7117 58 9 1 chr2 8906794 8907688 -241780166 + L1PA5 LINE L1 5254 6154 0 436 289 31 0 chr2 8907780 8907939 -241779915 + LTR33 LTR ERVL 304 467 -54 1188 141 3 0 chr2 8907985 8908370 -241779484 + (TCCA)n Simple_repeat Simple_repeat 1 386 0 213 205 0 0 chr2 8908383 8908422 -241779432 + (TCCA)n Simple_repeat Simple_repeat 1 39 0 220 267 95 103 chr2 8908459 8908575 -241779279 - L2 LINE L2 -8 3264 3150 222 118 0 0 chr2 8908620 8908654 -241779200 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 321 282 70 5 chr2 8909661 8909826 -241778028 + MIR SINE MIR 16 191 -63 191 286 143 0 chr2 8909895 8909951 -241777903 + MIR SINE MIR 87 150 -58 186 43 0 0 chr2 8910390 8910413 -241777441 + (CAGCC)n Simple_repeat Simple_repeat 1 23 0 270 250 45 0 chr2 8910477 8910565 -241777289 + CT-rich Low_complexity Low_complexity 4 95 0 635 253 125 108 chr2 8910645 8910847 -241777007 + L3 LINE CR1 1083 1280 -297 1906 134 10 7 chr2 8910847 8911137 -241776717 + AluSx SINE Alu 1 291 -21 635 253 125 108 chr2 8911137 8911405 -241776449 + L3 LINE CR1 1280 1561 -16 2284 117 3 3 chr2 8911861 8912169 -241775685 + AluSg SINE Alu 1 308 -2 1728 145 89 3 chr2 8912496 8912778 -241775076 + AluSx SINE Alu 1 306 -6 640 197 50 67 chr2 8913992 8914231 -241773623 - L1MC5 LINE L1 -64 7897 7663 1784 148 42 0 chr2 8914282 8914545 -241773309 - AluJo SINE Alu -38 274 1 414 283 47 57 chr2 8914545 8914837 -241773017 - L1MC5 LINE L1 -305 7656 7366 440 256 34 68 chr2 8915007 8915051 -241772803 + LTR16C LTR ERVL 167 211 -280 1974 149 3 3 chr2 8915051 8915371 -241772483 + AluJb SINE Alu 1 312 0 2294 110 0 0 chr2 8915379 8915665 -241772189 + AluSx SINE Alu 1 287 -20 192 40 0 0 chr2 8915665 8915690 -241772164 + (CA)n Simple_repeat Simple_repeat 2 26 0 440 256 34 68 chr2 8915695 8915817 -241772037 + LTR16C LTR ERVL 218 336 -155 23 0 0 0 chr2 8915832 8915855 -241771999 + AT_rich Low_complexity Low_complexity 1 23 0 361 261 104 8 chr2 8915917 8916051 -241771803 + LTR16C LTR ERVL 345 491 0 183 188 0 0 chr2 8916643 8916691 -241771163 + (TG)n Simple_repeat Simple_repeat 2 49 0 253 324 36 36 chr2 8916879 8916990 -241770864 + MIR SINE MIR 41 151 -111 3535 116 118 19 chr2 8917173 8917273 -241770581 + L1MC1 LINE L1 5587 5676 -657 2221 108 3 16 chr2 8917273 8917578 -241770276 + AluSx SINE Alu 1 301 -11 3535 116 118 19 chr2 8917578 8918149 -241769705 + L1MC1 LINE L1 5676 6324 -9 1880 155 14 0 chr2 8918204 8918488 -241769366 - AluJo SINE Alu -12 300 13 871 181 115 29 chr2 8918899 8919142 -241768712 - LTR45B LTR ERV1 0 489 226 2101 111 10 7 chr2 8919154 8919452 -241768402 + AluSq SINE Alu 1 299 -14 249 200 0 0 chr2 8919516 8919571 -241768283 - LTR45B LTR ERV1 -306 183 129 356 96 0 0 chr2 8919611 8919663 -241768191 - LTR45B LTR ERV1 -361 128 77 232 259 86 0 chr2 8919782 8919840 -241768014 + MIR SINE MIR 88 150 -112 325 285 65 32 chr2 8919911 8920034 -241767820 + MIR3 SINE MIR 71 197 -11 240 362 11 11 chr2 8920040 8920134 -241767720 + MER5A DNA MER1_type 7 100 -89 186 302 39 116 chr2 8920263 8920392 -241767462 + L2 LINE L2 2606 2724 -590 836 281 117 12 chr2 8920724 8921300 -241766554 - L1ME LINE L1 -357 5813 5175 186 43 0 0 chr2 8922216 8922239 -241765615 + (TG)n Simple_repeat Simple_repeat 2 24 0 2281 92 7 3 chr2 8922481 8922775 -241765079 + AluSx SINE Alu 1 295 -17 411 214 296 0 chr2 8923028 8923234 -241764620 + L2 LINE L2 2509 2775 -539 189 273 23 0 chr2 8923427 8923471 -241764383 + L2 LINE L2 3265 3309 -4 2261 98 0 0 chr2 8923555 8923840 -241764014 - AluSx SINE Alu -27 285 1 376 260 107 30 chr2 8924289 8924458 -241763396 - MIR SINE MIR 0 262 81 649 318 77 14 chr2 8924477 8924895 -241762959 + LTR16B LTR ERVL 21 464 0 325 259 129 14 chr2 8924917 8925064 -241762790 + MLT1J LTR MaLR 10 173 -338 359 132 0 29 chr2 8925191 8925259 -241762595 - L1M4 LINE L1 -914 5232 5167 2149 152 0 0 chr2 8925259 8925556 -241762298 + AluSx SINE Alu 1 297 -15 1355 153 80 90 chr2 8925605 8925906 -241761948 + AluJo SINE Alu 1 298 -14 265 232 0 61 chr2 8926078 8926160 -241761694 - MIR SINE MIR -116 92 16 1346 43 0 0 chr2 8926445 8926629 -241761225 + L1PA4 LINE L1 5983 6166 0 546 176 235 0 chr2 8927074 8927227 -241760627 - MER53 DNA DNA 0 189 1 198 323 125 67 chr2 8928231 8928544 -241759310 + L2 LINE L2 2921 3251 -21 937 189 13 13 chr2 8928801 8928960 -241758894 - FRAM SINE Alu -15 161 3 1922 134 38 3 chr2 8928974 8929264 -241758590 - AluSx SINE Alu -12 300 1 571 295 112 69 chr2 8929313 8929446 -241758408 - L1ME4a LINE L1 -296 5825 5699 2348 100 0 13 chr2 8929446 8929756 -241758098 - AluSx SINE Alu -6 306 1 571 295 112 69 chr2 8929756 8930168 -241757686 - L1ME4a LINE L1 -422 5699 5234 384 77 0 0 chr2 8930168 8930220 -241757634 + (TA)n Simple_repeat Simple_repeat 1 52 0 571 295 112 69 chr2 8930220 8930337 -241757517 - L1ME4a LINE L1 -887 5234 5124 24 0 0 0 chr2 8930441 8930465 -241757389 + AT_rich Low_complexity Low_complexity 1 24 0 316 274 234 51 chr2 8930777 8931131 -241756723 + L2 LINE L2 2853 3271 -1 344 282 86 58 chr2 8931587 8931761 -241756093 + MIR SINE MIR 34 212 -50 784 164 0 0 chr2 8932018 8932140 -241755714 + FLAM_C SINE Alu 1 122 -21 237 33 0 0 chr2 8932140 8932170 -241755684 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 590 11 34 11 chr2 8932197 8932285 -241755569 + (CA)n Simple_repeat Simple_repeat 1 90 0 386 287 108 46 chr2 8932450 8932595 -241755259 + L1ME4a LINE L1 5211 5346 -816 2258 112 0 7 chr2 8932595 8932891 -241754963 + AluSx SINE Alu 1 294 -18 386 287 108 46 chr2 8932891 8933003 -241754851 + L1ME4a LINE L1 5346 5485 -677 2017 123 10 30 chr2 8933020 8933320 -241754534 + AluJo SINE Alu 1 294 -18 258 248 111 46 chr2 8933323 8933476 -241754378 + L1ME4a LINE L1 5579 5741 -380 236 233 67 42 chr2 8933576 8933696 -241754158 + L1ME4a LINE L1 5974 6096 -25 2317 86 14 0 chr2 8934300 8934591 -241753263 - AluSx SINE Alu -17 295 1 2294 112 3 10 chr2 8935120 8935434 -241752420 + AluSx SINE Alu 1 312 0 2320 69 7 33 chr2 8935502 8935808 -241752046 + AluY SINE Alu 1 298 -13 1886 114 0 8 chr2 8936958 8937260 -241750594 + AluSx SINE Alu 30 312 0 2244 112 0 3 chr2 8938188 8938492 -241749362 - AluSx SINE Alu -9 303 1 2400 107 0 3 chr2 8939683 8939993 -241747861 - AluSg SINE Alu -1 309 1 193 292 79 11 chr2 8940495 8940584 -241747270 - L2 LINE L2 -556 2758 2664 415 277 150 58 chr2 8942619 8942829 -241745025 - L1ME4a LINE L1 -66 6055 5815 2445 87 0 0 chr2 8942829 8943127 -241744727 + AluSx SINE Alu 1 298 -14 415 277 150 58 chr2 8943127 8943176 -241744678 - L1ME4a LINE L1 -306 5815 5772 1837 159 0 21 chr2 8943441 8943724 -241744130 + AluJb SINE Alu 6 282 -30 512 30 15 0 chr2 8944152 8944218 -241743636 + (TTCA)n Simple_repeat Simple_repeat 4 70 0 347 267 0 0 chr2 8944512 8944587 -241743267 - MIR3 SINE MIR -51 157 83 255 180 66 0 chr2 8944614 8944675 -241743179 + GA-rich Low_complexity Low_complexity 2 66 0 252 320 107 27 chr2 8944921 8945071 -241742783 - L2 LINE L2 -29 3243 3082 3260 149 15 11 chr2 8945353 8945882 -241741972 + LTR26B LTR ERV1 1 531 0 480 313 0 0 chr2 8945970 8946101 -241741753 + MIR SINE MIR 111 241 -21 223 320 13 0 chr2 8946214 8946292 -241741562 - MIR SINE MIR -86 122 44 510 202 23 54 chr2 8946554 8946683 -241741171 + MER5A DNA MER1_type 12 136 -53 232 311 58 0 chr2 8946944 8947047 -241740807 - L2 LINE L2 -229 3043 2935 1023 240 43 0 chr2 8947085 8947318 -241740536 - MER115 DNA AcHobo 0 693 451 244 261 261 43 chr2 8947359 8947497 -241740357 - MER115 DNA AcHobo -308 385 218 508 195 29 98 chr2 8947692 8947866 -241739988 - L1M4 LINE L1 -1559 4587 4426 194 290 188 51 chr2 8947871 8948009 -241739845 - MIR SINE MIR -56 206 50 425 309 54 6 chr2 8948217 8948385 -241739469 + MER5B DNA MER1_type 1 176 -2 1806 139 0 22 chr2 8948505 8948779 -241739075 - AluJo SINE Alu -44 268 1 305 238 49 112 chr2 8948780 8948923 -241738931 + MIR SINE MIR 21 154 -108 762 230 227 16 chr2 8948929 8949299 -241738555 + MLT1H1 LTR MaLR 46 493 -62 185 311 44 82 chr2 8949592 8949727 -241738127 - L2 LINE L2 -21 3251 3122 1087 130 43 24 chr2 8949731 8949938 -241737916 + L1PA15 LINE L1 5942 6152 -13 365 252 63 0 chr2 8950781 8950908 -241736946 + MIR SINE MIR 25 159 -103 1870 127 92 11 chr2 8950908 8951255 -241736599 - THE1C LTR MaLR 0 375 1 2053 152 28 6 chr2 8951359 8951714 -241736140 + MLT1A1 LTR MaLR 3 365 0 1660 159 65 23 chr2 8952230 8952538 -241735316 - MLT1A1 LTR MaLR 0 365 45 1236 157 77 21 chr2 8952538 8952896 -241734958 + LTR47A LTR ERVL 1 452 0 318 85 0 21 chr2 8952899 8952946 -241734908 - MLT1A1 LTR MaLR -328 46 1 349 346 48 5 chr2 8952997 8953185 -241734669 - MIR SINE MIR -17 245 50 1861 158 13 17 chr2 8953351 8953649 -241734205 + AluJb SINE Alu 1 297 -15 2295 79 9 32 chr2 8954067 8954382 -241733472 + AluSx SINE Alu 1 308 -4 180 125 0 0 chr2 8954426 8954458 -241733396 + (CA)n Simple_repeat Simple_repeat 1 32 0 2069 153 3 3 chr2 8954615 8954923 -241732931 - AluJb SINE Alu -4 308 1 3657 208 68 19 chr2 8954952 8955645 -241732209 + Charlie1a DNA MER1_type 5 755 -2006 2335 105 0 3 chr2 8955645 8955950 -241731904 - AluSq SINE Alu -9 304 1 3657 208 68 19 chr2 8955950 8956175 -241731679 + Charlie1a DNA MER1_type 755 968 -487 2008 111 61 0 chr2 8956176 8956455 -241731399 - AluSq SINE Alu -17 296 1 891 169 144 88 chr2 8956461 8956650 -241731204 + Charlie1a DNA MER1_type 1077 1254 -1507 1733 165 0 4 chr2 8956650 8956917 -241730937 - AluJb SINE Alu -45 267 2 891 169 144 88 chr2 8956917 8957081 -241730773 + Charlie1a DNA MER1_type 1254 1450 -5 247 298 177 44 chr2 8957454 8957568 -241730286 + MER5A DNA MER1_type 11 153 -36 2087 114 7 36 chr2 8957568 8957875 -241729979 + AluSx SINE Alu 1 298 -14 247 298 177 44 chr2 8957875 8957918 -241729936 + MER5A DNA MER1_type 153 189 0 1980 147 39 74 chr2 8958243 8958781 -241729073 - MER51A LTR ERV1 0 640 1 776 334 98 14 chr2 8959029 8959787 -241728067 + L1MEc LINE L1 1000 1820 -4576 325 339 58 36 chr2 8959905 8960129 -241727725 + L1MEc LINE L1 1940 2168 -4047 845 222 6 11 chr2 8960135 8960311 -241727543 + FAM SINE Alu 1 175 0 289 234 170 34 chr2 8960329 8960363 -241727491 - L1MC5 LINE L1 -36 7925 7897 1456 202 6 42 chr2 8960363 8960675 -241727179 + AluJo SINE Alu 1 301 -11 289 234 170 34 chr2 8960675 8960875 -241726979 - L1MC5 LINE L1 -64 7897 7659 422 299 77 58 chr2 8960875 8960934 -241726920 + L1MEc LINE L1 2181 2237 -3978 2140 140 10 0 chr2 8960934 8961242 -241726612 - AluSx SINE Alu -1 311 1 422 299 77 58 chr2 8961242 8961389 -241726465 + L1MEc LINE L1 2237 2391 -3824 1349 142 124 11 chr2 8961502 8961769 -241726085 - AluJo SINE Alu 0 312 16 1811 68 5 5 chr2 8962052 8962271 -241725583 + AluSp SINE Alu 1 219 -94 827 98 0 49 chr2 8962271 8962393 -241725461 + AluSp/q SINE Alu 188 303 -10 210 37 0 0 chr2 8963079 8963106 -241724748 + (CA)n Simple_repeat Simple_repeat 2 28 0 294 114 0 0 chr2 8963351 8963395 -241724459 + U5 snRNA snRNA 8 51 -65 278 169 264 0 chr2 8963559 8963673 -241724181 + MIR SINE MIR 104 261 -1 2390 97 13 0 chr2 8964088 8964396 -241723458 - AluSx SINE Alu 0 312 1 191 260 26 39 chr2 8965388 8965465 -241722389 + MIR3 SINE MIR 128 203 -5 180 231 0 0 chr2 8965858 8965897 -241721957 + MIR SINE MIR 91 129 -79 2288 110 0 10 chr2 8966566 8966875 -241720979 - AluSx SINE Alu -6 306 1 1414 147 107 20 chr2 8967478 8967730 -241720124 - AluJb SINE Alu -6 306 33 2043 93 41 10 chr2 8967786 8968077 -241719777 - AluSq SINE Alu -13 300 1 2283 157 95 17 chr2 8968197 8968618 -241719236 - LTR32 LTR ERVL -6 465 12 1887 290 53 25 chr2 8968630 8969303 -241718551 - HAL1 LINE L1 -310 2197 1497 2046 143 20 3 chr2 8969303 8969604 -241718250 + AluSx SINE Alu 1 306 -6 1887 290 53 25 chr2 8969604 8969727 -241718127 - HAL1 LINE L1 -1010 1497 1379 1090 285 124 14 chr2 8969760 8970266 -241717588 - HAL1 LINE L1 -1832 675 114 240 224 0 0 chr2 8970266 8970333 -241717521 + (TG)n Simple_repeat Simple_repeat 1 67 0 252 265 88 0 chr2 8970333 8970401 -241717453 - HAL1 LINE L1 -2421 86 13 345 243 21 104 chr2 8970981 8971045 -241716809 - MIR3 SINE MIR 0 208 140 280 81 0 0 chr2 8971045 8971082 -241716772 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 2124 90 25 11 chr2 8971084 8971361 -241716493 - AluSq SINE Alu -32 281 1 345 243 21 104 chr2 8971361 8971437 -241716417 - MIR3 SINE MIR -69 139 77 554 261 79 14 chr2 8972229 8972444 -241715410 - L1M4 LINE L1 -1131 5015 4787 322 312 105 75 chr2 8972654 8972949 -241714905 + L2 LINE L2 2883 3186 -86 547 264 156 26 chr2 8973024 8973255 -241714599 - MIR SINE MIR 0 262 2 188 311 29 39 chr2 8973998 8974101 -241713753 + MIR SINE MIR 27 128 -134 2478 78 3 0 chr2 8974462 8974769 -241713085 + AluY SINE Alu 1 308 -3 2624 102 3 0 chr2 8975449 8975812 -241712042 + THE1B LTR MaLR 1 364 0 331 236 121 98 chr2 8975832 8976006 -241711848 - MER20B DNA MER1_type -604 179 2 1906 97 89 4 chr2 8976024 8976315 -241711539 + AluSc SINE Alu 1 313 0 273 182 125 23 chr2 8976346 8976434 -241711420 - L2 LINE L2 -14 3299 3203 2340 170 22 10 chr2 8977149 8977211 -241710643 - MSTB LTR MaLR -4 422 362 1847 115 11 11 chr2 8977211 8977472 -241710382 + AluSg SINE Alu 38 298 -12 2340 170 22 10 chr2 8977472 8977821 -241710033 - MSTB LTR MaLR -64 362 6 2336 92 3 13 chr2 8977821 8978126 -241709728 + AluSq SINE Alu 1 302 -11 854 29 20 0 chr2 8978820 8978922 -241708932 + AluY SINE Alu 208 311 0 2207 118 0 3 chr2 8980605 8980902 -241706952 - AluSx SINE Alu -3 309 14 251 169 0 51 chr2 8981346 8981405 -241706449 + L1MB2 LINE L1 6095 6150 -21 311 309 71 0 chr2 8981407 8981491 -241706363 + L1MC4 LINE L1 6614 6703 -1339 1880 123 42 11 chr2 8981618 8981902 -241705952 + AluSx SINE Alu 1 293 -19 2212 125 3 0 chr2 8982649 8982946 -241704908 + AluSx SINE Alu 3 300 -12 2236 86 0 4 chr2 8983691 8983970 -241703884 - AluSq SINE Alu -11 302 25 251 275 84 61 chr2 8984438 8984531 -241703323 - MIR SINE MIR -96 166 68 2388 155 19 19 chr2 8984531 8984963 -241702891 - MSTB1 LTR MaLR 0 432 1 251 275 84 61 chr2 8984963 8985000 -241702854 - MIR SINE MIR -194 68 33 779 201 0 0 chr2 8985534 8985678 -241702176 + U4 snRNA snRNA 1 144 -1 1149 123 0 0 chr2 8985929 8985953 -241701901 + (TGGG)n Simple_repeat Simple_repeat 1 203 0 1149 123 0 0 chr2 8985953 8986132 -241701722 + (TGGG)n Simple_repeat Simple_repeat 2 180 0 496 31 0 0 chr2 8986764 8986829 -241701025 + AluY SINE Alu 2 66 -244 180 77 0 0 chr2 8986848 8986874 -241700980 + (A)n Simple_repeat Simple_repeat 1 26 0 388 280 49 42 chr2 8987256 8987399 -241700455 + MIR SINE MIR 38 181 -81 1401 282 54 9 chr2 8987466 8987927 -241699927 + MLT1L LTR MaLR 58 539 -76 665 216 70 75 chr2 8987941 8988196 -241699658 + MIR SINE MIR 16 262 0 224 272 0 65 chr2 8988483 8988652 -241699202 + G-rich Low_complexity Low_complexity 2 159 0 2012 129 26 7 chr2 8989513 8989815 -241698039 - AluSx SINE Alu -4 308 1 2691 49 0 0 chr2 8990282 8990587 -241697267 - AluY SINE Alu -6 305 1 560 271 98 5 chr2 8990678 8990892 -241696962 + L1MEd LINE L1 594 827 -5292 1863 164 6 31 chr2 8990908 8991226 -241696628 - AluJb SINE Alu -2 310 1 26 30 0 0 chr2 8991237 8991270 -241696584 + AT_rich Low_complexity Low_complexity 1 33 0 544 270 103 68 chr2 8991285 8992137 -241695717 + L1MEd LINE L1 852 1673 -4637 1974 143 28 0 chr2 8992137 8992424 -241695430 + AluJb SINE Alu 1 295 -17 544 270 103 68 chr2 8992424 8992601 -241695253 + L1MEd LINE L1 1673 1842 -4468 2087 144 0 0 chr2 8992601 8992899 -241694955 - AluSx SINE Alu -14 298 1 544 270 103 68 chr2 8992899 8993295 -241694559 + L1MEd LINE L1 1842 2345 -3965 24 0 0 0 chr2 8993379 8993403 -241694451 + AT_rich Low_complexity Low_complexity 1 24 0 333 316 67 84 chr2 8993756 8994113 -241693741 - L2 LINE L2 -20 3252 2902 684 187 169 21 chr2 8994821 8995188 -241692666 + LTR48 LTR ERV1 362 706 -1 1347 175 34 7 chr2 8995189 8995458 -241692396 - L1MB4 LINE L1 -317 5863 5588 475 157 122 68 chr2 8995627 8995774 -241692080 + MLT1B LTR MaLR 1 155 -235 360 194 15 0 chr2 8995777 8995844 -241692010 + MLT1B LTR MaLR 303 370 -4 241 333 62 14 chr2 8996815 8996959 -241690895 - MIR3 SINE MIR -23 185 35 478 335 12 0 chr2 8997021 8997194 -241690660 + (TCTCTG)n Simple_repeat Simple_repeat 5 179 0 251 366 0 0 chr2 8997582 8997694 -241690160 + (CA)n Simple_repeat Simple_repeat 1 112 0 211 316 0 0 chr2 8997761 8997840 -241690014 + (CA)n Simple_repeat Simple_repeat 1 79 0 236 347 62 0 chr2 8998561 8998705 -241689149 - MLT1H1 LTR MaLR -335 220 68 1036 183 27 76 chr2 8998747 8999010 -241688844 + MLT1D LTR MaLR 256 505 0 887 231 113 48 chr2 8999913 9000224 -241687630 - MER58B DNA MER1_type -1 340 10 254 231 62 0 chr2 9000248 9000313 -241687541 - MER81 DNA DNA 0 114 46 282 308 19 19 chr2 9000967 9001071 -241686783 + MIR3 SINE MIR 53 156 -52 2350 58 19 22 chr2 9001103 9001416 -241686438 - AluSx SINE Alu 0 312 1 10862 128 32 35 chr2 9001936 9002765 -241685089 + Tigger1 DNA MER2_type 23 854 -1564 1902 118 186 14 chr2 9002765 9003130 -241684724 - MSTA LTR MaLR 0 428 1 10862 128 32 35 chr2 9003130 9004010 -241683844 + Tigger1 DNA MER2_type 854 1727 -691 1683 187 29 0 chr2 9004010 9004320 -241683534 + L1PA16 LINE L1 5848 6166 0 10862 128 32 35 chr2 9004320 9004501 -241683353 + Tigger1 DNA MER2_type 1727 1907 -511 1270 124 6 0 chr2 9004504 9004682 -241683172 - AluSx SINE Alu -133 179 1 923 147 35 56 chr2 9004685 9004883 -241682971 + Tigger1 DNA MER2_type 2225 2418 0 255 213 0 0 chr2 9005394 9005441 -241682413 + U2 snRNA snRNA 1 47 -141 1723 164 0 14 chr2 9005538 9005824 -241682030 + AluJo SINE Alu 1 282 -30 2254 95 0 0 chr2 9005875 9006169 -241681685 - AluSx SINE Alu -18 294 1 2066 88 7 11 chr2 9006718 9007044 -241680810 - AluSp SINE Alu 0 325 1 199 196 22 0 chr2 9007266 9007312 -241680542 + MIR SINE MIR 47 93 -169 474 78 0 117 chr2 9007332 9007373 -241680481 - MER53 DNA DNA -5 184 140 2028 123 3 0 chr2 9007373 9007675 -241680179 + AluSx SINE Alu 1 303 -9 474 78 0 117 chr2 9007675 9007736 -241680118 - MER53 DNA DNA -49 140 94 2137 122 0 3 chr2 9007864 9008175 -241679679 + AluSq SINE Alu 1 310 -3 853 218 132 0 chr2 9008262 9008459 -241679395 - MER58A DNA MER1_type -1 223 1 398 329 43 69 chr2 9009133 9009316 -241678538 - L2 LINE L2 -29 3284 3109 2635 166 25 52 chr2 9009316 9009839 -241678015 + LTR54 LTR ERV1 2 510 0 398 329 43 69 chr2 9009839 9009932 -241677922 - L2 LINE L2 -204 3109 3015 243 304 108 0 chr2 9010001 9010103 -241677751 - LTR33A LTR ERVL 0 523 411 2246 119 0 0 chr2 9010107 9010419 -241677435 + AluSq SINE Alu 1 312 -1 397 295 12 21 chr2 9010668 9010840 -241677014 + L1ME LINE L1 5263 5428 -749 1042 125 82 86 chr2 9010849 9010890 -241676964 - MLT2B3 LTR ERVL 0 554 514 1959 166 17 39 chr2 9010890 9011246 -241676608 + MER7A DNA MER2_type 1 346 0 1042 125 82 86 chr2 9011246 9011436 -241676418 - MLT2B3 LTR ERVL -40 514 324 198 313 0 73 chr2 9011614 9011710 -241676144 + MIR SINE MIR 172 260 -2 273 318 11 0 chr2 9011778 9011866 -241675988 + L2 LINE L2 3183 3271 -1 229 264 41 58 chr2 9012113 9012234 -241675620 + L2 LINE L2 1580 1698 -1616 457 270 8 0 chr2 9012248 9012374 -241675480 + L2 LINE L2 2246 2372 -942 184 208 69 14 chr2 9012439 9012511 -241675343 + L2 LINE L2 2837 2912 -402 386 336 8 0 chr2 9012597 9012722 -241675132 + L1ME LINE L1 5596 5721 -449 854 267 44 4 chr2 9012893 9013144 -241674710 + MIR SINE MIR 2 262 0 330 244 61 0 chr2 9013231 9013313 -241674541 + MIR SINE MIR 96 182 -80 472 225 17 33 chr2 9013460 9013580 -241674274 - MIR3 SINE MIR -8 200 83 609 115 10 39 chr2 9013803 9013907 -241673947 + L1MA10 LINE L1 6234 6334 0 1201 40 20 0 chr2 9013915 9014103 -241673751 + L1PA2 LINE L1 6002 6155 0 197 329 264 0 chr2 9014166 9014306 -241673548 - MIR SINE MIR -10 252 76 1888 116 36 7 chr2 9014390 9014693 -241673161 + AluJb SINE Alu 1 312 0 285 307 73 13 chr2 9014972 9015122 -241672732 - MIR3 SINE MIR -7 201 43 653 238 54 18 chr2 9015182 9015350 -241672504 + MER5B DNA MER1_type 5 178 0 2380 83 0 0 chr2 9015459 9015761 -241672093 - AluSx SINE Alu -10 302 1 330 329 37 30 chr2 9016050 9016214 -241671640 - MIR SINE MIR -78 184 20 276 270 167 24 chr2 9016998 9017124 -241670730 + MIR3 SINE MIR 18 161 -47 262 358 58 0 chr2 9017122 9017242 -241670612 + MIR3 SINE MIR 69 195 -13 * 1206 58 0 0 chr2 9018575 9018730 -241669124 + (TTCCC)n Simple_repeat Simple_repeat 3 157 0 2148 92 7 29 chr2 9020014 9020320 -241667534 + AluSx SINE Alu 1 299 -13 1143 138 0 11 chr2 9021620 9021801 -241666053 - AluSp SINE Alu -1 312 134 2112 100 38 0 chr2 9021802 9022092 -241665762 - AluSq SINE Alu -10 303 3 1203 170 55 103 chr2 9022106 9022126 -241665728 + MLT1B LTR MaLR 1 20 -370 2190 178 3 11 chr2 9022126 9022492 -241665362 + MLT1A1 LTR MaLR 1 363 -2 1203 170 55 103 chr2 9022492 9022800 -241665054 + MLT1B LTR MaLR 20 313 -77 1021 172 91 5 chr2 9022826 9023047 -241664807 + MLT2C2 LTR ERVL 215 454 -10 212 0 0 35 chr2 9023731 9023760 -241664094 + (CCTG)n Simple_repeat Simple_repeat 2 29 0 183 279 162 0 chr2 9023803 9023871 -241663983 + L2 LINE L2 2716 2794 -520 185 193 0 18 chr2 9027624 9027681 -241660173 + (CA)n Simple_repeat Simple_repeat 2 57 0 2090 84 39 0 chr2 9028340 9028624 -241659230 + AluSc SINE Alu 1 295 -14 1957 123 3 0 chr2 9028770 9029081 -241658773 - AluSx SINE Alu 0 312 1 961 267 90 15 chr2 9029402 9029814 -241658040 + MLT1C LTR MaLR 7 449 -18 2239 116 0 0 chr2 9030603 9030971 -241656883 + AluSq SINE Alu 1 368 0 231 114 0 0 chr2 9034155 9034190 -241653664 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 411 21 0 0 chr2 9034327 9034375 -241653479 + (TG)n Simple_repeat Simple_repeat 1 48 0 186 71 0 0 chr2 9034377 9034405 -241653449 + (GA)n Simple_repeat Simple_repeat 2 29 0 1672 98 0 45 chr2 9034418 9034663 -241653191 - AluSq SINE Alu -79 234 1 1622 188 24 3 chr2 9034856 9035148 -241652706 - AluJb SINE Alu -14 298 1 2075 95 0 7 chr2 9035231 9035515 -241652339 + AluSq SINE Alu 1 282 -31 1333 225 186 19 chr2 9035515 9035987 -241651867 + L1ME3A LINE L1 5592 6142 -28 410 256 47 16 chr2 9036080 9036209 -241651645 + MLT1J2 LTR MaLR 253 385 -65 198 103 0 0 chr2 9036244 9036273 -241651581 + (GGGA)n Simple_repeat Simple_repeat 4 32 0 847 235 57 4 chr2 9036406 9036653 -241651201 + L1MC4a LINE L1 5804 6063 -1745 584 167 28 0 chr2 9036877 9036985 -241650869 - L1MB5 LINE L1 -249 5925 5815 2048 134 0 0 chr2 9037200 9037491 -241650363 - AluSp SINE Alu -22 291 1 1559 248 62 12 chr2 9037612 9038044 -241649810 + MLT1C LTR MaLR 6 459 -8 701 304 45 20 chr2 9038119 9038366 -241649488 + MIR SINE MIR 9 261 -1 367 322 122 6 chr2 9039517 9039697 -241648157 + MIR SINE MIR 35 235 -27 675 179 0 7 chr2 9039701 9039877 -241647977 - AluJo SINE Alu -91 221 14 1175 240 118 48 chr2 9040246 9040704 -241647150 - MLT1F1 LTR MaLR -8 559 70 826 199 33 50 chr2 9041214 9041294 -241646560 - MER45A DNA AcHobo -1403 178 98 1803 157 7 13 chr2 9041294 9041593 -241646261 + AluJb SINE Alu 1 297 -15 826 199 33 50 chr2 9041593 9041693 -241646161 - MER45A DNA AcHobo -1483 98 1 234 0 0 0 chr2 9042065 9042091 -241645763 + (TATG)n Simple_repeat Simple_repeat 3 28 0 747 203 38 0 chr2 9042093 9042226 -241645628 - FRAM SINE Alu -30 146 9 249 111 205 94 chr2 9042228 9042261 -241645593 + Charlie4 DNA MER1_type 1825 1853 -108 1507 205 93 37 chr2 9042261 9042636 -241645218 + MSTD LTR MaLR 1 396 0 249 111 205 94 chr2 9042636 9042719 -241645135 + Charlie4 DNA MER1_type 1853 1954 -7 296 309 91 30 chr2 9043102 9043267 -241644587 - MIR SINE MIR -33 229 55 211 369 99 19 chr2 9043538 9043953 -241643901 - L2 LINE L2 -411 2903 2456 916 231 39 21 chr2 9044431 9044665 -241643189 + MIR SINE MIR 12 249 -13 222 200 0 0 chr2 9044634 9044684 -241643170 + L2 LINE L2 3264 3313 0 * 249 283 0 0 chr2 9044892 9044952 -241642902 + L2 LINE L2 2999 3058 -214 237 339 73 0 chr2 9045814 9045938 -241641916 + L2 LINE L2 2393 2525 -789 884 236 15 0 chr2 9045940 9046135 -241641719 + MER20 DNA MER1_type 1 198 -21 328 290 186 41 chr2 9046153 9046320 -241641534 + L2 LINE L2 2519 2660 -653 2265 102 0 10 chr2 9046320 9046633 -241641221 - AluSg SINE Alu 0 310 1 328 290 186 41 chr2 9046633 9046918 -241640936 + L2 LINE L2 2660 3043 -270 243 0 0 0 chr2 9047640 9047667 -241640187 + (CA)n Simple_repeat Simple_repeat 2 28 0 460 236 73 37 chr2 9048577 9048784 -241639070 + L1PA8A LINE L1 5384 5597 -569 340 232 189 0 chr2 9048811 9049047 -241638807 + L1ME2 LINE L1 5894 6331 -3 386 312 115 35 chr2 9049346 9049686 -241638168 + L2 LINE L2 2892 3258 -14 2522 147 22 15 chr2 9049716 9049760 -241638094 + MLT1C LTR MaLR 1 43 -424 2225 169 8 13 chr2 9049760 9050150 -241637704 + MLT1B LTR MaLR 3 390 0 2522 147 22 15 chr2 9050150 9050567 -241637287 + MLT1C LTR MaLR 43 465 -2 202 358 32 0 chr2 9051317 9051412 -241636442 - L3 LINE CR1 -46 1531 1434 2453 150 55 5 chr2 9052735 9053174 -241634680 - MER65C LTR ERV1 0 461 1 393 292 134 61 chr2 9054247 9054641 -241633213 - L2 LINE L2 -18 3254 2832 525 135 31 0 chr2 9054681 9054777 -241633077 - L1MC2 LINE L1 -3 6341 6243 283 167 19 0 chr2 9054777 9054831 -241633023 - L1MC1 LINE L1 -131 6202 6148 244 270 40 50 chr2 9054967 9055067 -241632787 + L2 LINE L2 3155 3253 -19 347 285 0 35 chr2 9055068 9055212 -241632642 + GA-rich Low_complexity Low_complexity 3 141 0 262 340 59 20 chr2 9055218 9055371 -241632483 - L2 LINE L2 -592 2722 2564 702 287 48 5 chr2 9057249 9057437 -241630417 + MER91A DNA MER1_type 1 196 0 560 317 32 32 chr2 9058018 9058239 -241629615 + L3 LINE CR1 538 758 -819 193 305 220 44 chr2 9059251 9059592 -241628262 + L3 LINE CR1 1091 1491 -86 302 359 0 0 chr2 9060153 9060270 -241627584 + (CA)n Simple_repeat Simple_repeat 1 117 0 180 282 105 32 chr2 9060270 9060394 -241627460 - L2 LINE L2 -176 3096 2964 200 284 109 38 chr2 9060573 9060784 -241627070 + L2 LINE L2 2560 2785 -529 271 140 263 0 chr2 9060850 9060907 -241626947 + Tigger2 DNA MER2_type 1 72 -2646 2126 146 39 62 chr2 9060929 9061282 -241626572 + Tigger2 DNA MER2_type 2296 2639 -79 1898 157 0 7 chr2 9061282 9061575 -241626279 - AluJo SINE Alu -16 296 6 2126 146 39 62 chr2 9061575 9061654 -241626200 + Tigger2 DNA MER2_type 2639 2718 0 443 260 35 65 chr2 9061668 9061837 -241626017 - MIR SINE MIR -79 183 20 245 230 115 44 chr2 9061849 9061962 -241625892 - MER5A DNA MER1_type -2 187 67 284 309 43 64 chr2 9064212 9064400 -241623454 + MIR SINE MIR 8 191 -71 181 214 176 61 chr2 9064410 9064541 -241623313 - L2 LINE L2 -4 3268 3123 460 303 37 21 chr2 9064714 9064902 -241622952 - MIR SINE MIR -70 192 2 254 252 41 57 chr2 9065334 9065457 -241622397 + MIR3 SINE MIR 10 130 -78 243 0 0 0 chr2 9066158 9066185 -241621669 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 232 313 125 39 chr2 9066185 9066393 -241621461 - L2 LINE L2 -17 3255 3030 300 195 52 13 chr2 9066465 9066542 -241621312 - MIR SINE MIR -60 148 69 214 286 187 0 chr2 9067923 9068014 -241619840 - MIR SINE MIR -66 196 89 1898 174 52 17 chr2 9068062 9068469 -241619385 - MLT1C LTR MaLR -44 423 3 307 283 71 20 chr2 9068832 9068931 -241618923 + MIR SINE MIR 42 145 -117 1865 128 0 7 chr2 9069131 9069405 -241618449 + AluSx SINE Alu 39 310 -2 183 337 61 10 chr2 9069767 9069865 -241617989 + MIR SINE MIR 34 136 -72 298 219 176 34 chr2 9070592 9070711 -241617143 + MIR3 SINE MIR 4 139 -69 1059 96 6 11 chr2 9071027 9071205 -241616649 + (TGGA)n Simple_repeat Simple_repeat 4 180 0 2051 117 36 0 chr2 9071386 9071667 -241616187 + AluSg SINE Alu 1 291 -19 265 268 0 0 chr2 9071676 9071758 -241616096 - L1 LINE L1 -2763 3383 3302 717 203 62 0 chr2 9071806 9071934 -241615920 - FRAM SINE Alu -41 135 1 325 241 36 0 chr2 9071935 9072018 -241615836 - L1 LINE L1 -2884 3262 3177 2030 105 0 0 chr2 9072037 9072294 -241615560 + AluSx SINE Alu 1 257 -55 597 205 0 8 chr2 9072294 9072405 -241615449 - AluSq/x SINE Alu -194 118 9 300 242 121 0 chr2 9072432 9072523 -241615331 - L1 LINE L1 -2978 3168 3067 737 301 60 25 chr2 9072533 9072815 -241615039 + L2 LINE L2 3021 3312 -1 689 123 61 0 chr2 9072893 9073007 -241614847 - FLAM_C SINE Alu -20 123 3 214 277 161 9 chr2 9073029 9073141 -241614713 - MIR3 SINE MIR -69 139 11 1846 150 3 26 chr2 9074186 9074493 -241613361 - AluJo SINE Alu -12 300 1 340 242 33 44 chr2 9074744 9074835 -241613019 + L2 LINE L2 3183 3272 0 2243 108 3 3 chr2 9075736 9076033 -241611821 + AluSx SINE Alu 1 297 -15 202 267 208 10 chr2 9076166 9076267 -241611587 - MIR3 SINE MIR -85 123 3 452 178 0 11 chr2 9076549 9076639 -241611215 + L1MEc LINE L1 35 123 -6273 566 289 73 34 chr2 9076646 9077027 -241610827 - Charlie1a DNA MER1_type -964 491 96 281 214 155 0 chr2 9077792 9077876 -241609978 - L1ME4a LINE L1 -3 6118 6022 301 296 78 0 chr2 9077973 9078088 -241609766 - L1ME4a LINE L1 -280 5841 5718 2343 100 3 0 chr2 9078420 9078719 -241609135 + AluSp SINE Alu 1 300 -13 219 238 88 25 chr2 9079159 9079239 -241608615 - L2 LINE L2 -2 3311 3227 21 0 0 0 chr2 9080042 9080063 -241607791 + AT_rich Low_complexity Low_complexity 1 21 0 261 0 0 0 chr2 9080063 9080092 -241607762 + (TG)n Simple_repeat Simple_repeat 2 30 0 190 271 21 0 chr2 9080340 9080388 -241607466 + MIR SINE MIR 101 149 -113 200 347 14 0 chr2 9080851 9080923 -241606931 + MIR SINE MIR 161 233 -29 916 207 35 0 chr2 9082117 9082291 -241605563 - MER5A DNA MER1_type 0 189 10 1957 159 0 0 chr2 9082532 9082827 -241605027 - AluSx SINE Alu -17 295 1 303 301 147 44 chr2 9083307 9083443 -241604411 + MIR SINE MIR 25 174 -88 1879 165 26 3 chr2 9083493 9083796 -241604058 - AluJb SINE Alu -2 310 1 285 333 93 13 chr2 9083830 9083980 -241603874 + MIR3 SINE MIR 30 191 -17 381 115 0 0 chr2 9084079 9084131 -241603723 + MER5A DNA MER1_type 138 189 0 29 28 0 0 chr2 9084755 9084791 -241603063 + AT_rich Low_complexity Low_complexity 1 36 0 184 268 0 0 chr2 9084828 9084869 -241602985 + L2 LINE L2 3007 3047 -225 2391 99 0 6 chr2 9085016 9085330 -241602524 - AluSq SINE Alu -1 312 1 1898 127 19 61 chr2 9085356 9085444 -241602410 - MER47A DNA MER2_type -1957 366 276 1870 149 7 21 chr2 9085444 9085732 -241602122 + AluJo SINE Alu 13 296 -16 1898 127 19 61 chr2 9085732 9086005 -241601849 - MER47A DNA MER2_type -2047 276 20 281 267 110 27 chr2 9087072 9087218 -241600636 - L2 LINE L2 -188 3125 2968 254 211 239 55 chr2 9087215 9087324 -241600530 + MER5A DNA MER1_type 61 189 0 * 1748 189 116 193 chr2 9087324 9087596 -241600258 - L2 LINE L2 -702 2612 2320 1734 150 44 78 chr2 9087596 9087982 -241599872 - THE1C LTR MaLR -2 373 1 10039 115 19 46 chr2 9087982 9089422 -241598432 - THE1C-int LTR MaLR 0 1580 189 1951 161 7 3 chr2 9089422 9089721 -241598133 - AluSx SINE Alu -12 300 1 10039 115 19 46 chr2 9089721 9089903 -241597951 - THE1C-int LTR MaLR -1391 189 3 1978 126 60 30 chr2 9089905 9090269 -241597585 - THE1C LTR MaLR 0 375 1 1748 189 116 193 chr2 9090269 9090377 -241597477 - L2 LINE L2 -994 2320 2205 664 193 0 7 chr2 9090377 9090517 -241597337 - MER104 DNA Tc2 -7 173 35 1748 189 116 193 chr2 9090517 9090994 -241596860 - L2 LINE L2 -1109 2205 1688 42371 42 4 1 chr2 9090998 9097126 -241590728 + L1PA4 LINE L1 2 6149 -6 796 237 67 22 chr2 9097126 9097396 -241590458 - L2 LINE L2 -1612 1702 1421 193 299 16 118 chr2 9098488 9098615 -241589239 - MIR3 SINE MIR -16 192 79 237 47 0 70 chr2 9099232 9099275 -241588579 + (TTTTG)n Simple_repeat Simple_repeat 2 180 0 2201 111 4 0 chr2 9099275 9099555 -241588299 - AluSg SINE Alu -29 281 1 595 144 0 0 chr2 9099754 9099844 -241588010 + AluSg/x SINE Alu 206 295 -17 35 88 0 0 chr2 9099994 9100085 -241587769 + AT_rich Low_complexity Low_complexity 1 91 0 1613 170 14 14 chr2 9100172 9100460 -241587394 + AluJb SINE Alu 9 296 -16 1201 231 128 79 chr2 9100490 9101034 -241586820 - HAL1 LINE L1 -110 2397 1814 2298 94 0 10 chr2 9101034 9101341 -241586513 - AluY SINE Alu -7 304 1 1201 231 128 79 chr2 9101341 9101455 -241586399 - HAL1 LINE L1 -693 1814 1707 2405 251 84 46 chr2 9101499 9102005 -241585849 - HAL1 LINE L1 -1604 903 349 2201 113 3 0 chr2 9102005 9102305 -241585549 + AluY SINE Alu 1 301 -10 2405 251 84 46 chr2 9102305 9102668 -241585186 - HAL1 LINE L1 -2158 349 1 408 184 8 5 chr2 9102764 9102896 -241584958 - MER5A DNA MER1_type 0 189 1 381 296 81 6 chr2 9102924 9103096 -241584758 - L1ME LINE L1 -317 5804 5620 499 228 101 7 chr2 9103114 9103263 -241584591 - L2 LINE L2 -32 3281 3119 1994 274 72 32 chr2 9103327 9104040 -241583814 + L2 LINE L2 2120 2860 -454 486 86 0 14 chr2 9104054 9104124 -241583730 - THE1B LTR MaLR -53 311 243 846 231 156 60 chr2 9104160 9104403 -241583451 + L2 LINE L2 2871 3089 -224 751 173 16 0 chr2 9104403 9104530 -241583324 - FLAM_A SINE Alu -4 129 1 846 231 156 60 chr2 9104530 9104689 -241583165 + L2 LINE L2 3089 3312 -1 2116 112 20 20 chr2 9104918 9105223 -241582631 - AluSx SINE Alu -7 305 1 2532 113 6 6 chr2 9105367 9105731 -241582123 - THE1B LTR MaLR 0 364 1 194 286 162 32 chr2 9106133 9106287 -241581567 + MIR SINE MIR 89 262 0 1006 232 46 13 chr2 9106636 9106873 -241580981 + MIR SINE MIR 18 262 0 1066 299 84 32 chr2 9107089 9107615 -241580239 + L2 LINE L2 2174 2726 -588 218 189 0 19 chr2 9107780 9107833 -241580021 + CT-rich Low_complexity Low_complexity 1 52 0 771 224 13 13 chr2 9108018 9108174 -241579680 + MER5A DNA MER1_type 6 161 -28 644 166 14 90 chr2 9108202 9108347 -241579507 - AluJo SINE Alu -178 134 1 205 205 0 0 chr2 9108347 9108386 -241579468 + MER5A DNA MER1_type 151 189 0 847 300 84 33 chr2 9108606 9108759 -241579095 - L2 LINE L2 -2 3311 3167 366 83 250 0 chr2 9108759 9108819 -241579035 - MADE1 DNA Mariner -3 77 3 847 300 84 33 chr2 9108819 9108996 -241578858 - L2 LINE L2 -146 3167 3000 2572 200 33 13 chr2 9108996 9109535 -241578319 - MER44D DNA MER2_type 0 605 1 847 300 84 33 chr2 9109535 9109719 -241578135 - L2 LINE L2 -313 3000 2776 584 182 53 28 chr2 9109720 9109870 -241577984 - L1ME2 LINE L1 0 6165 6020 694 221 121 26 chr2 9109888 9110122 -241577732 - L2 LINE L2 -550 2764 2505 185 306 94 24 chr2 9110122 9110207 -241577647 - MER5C DNA MER1_type 0 324 234 225 0 0 0 chr2 9110386 9110411 -241577443 + (T)n Simple_repeat Simple_repeat 1 25 0 2051 125 7 14 chr2 9111011 9111307 -241576547 + AluSx SINE Alu 1 294 -18 701 258 44 18 chr2 9111478 9111703 -241576151 + L2 LINE L2 3083 3313 0 2108 79 23 0 chr2 9112069 9112335 -241575519 - AluSg SINE Alu -16 294 23 353 286 0 0 chr2 9112336 9112413 -241575441 - FLAM_A SINE Alu -50 83 7 21 0 0 0 chr2 9112908 9112929 -241574925 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 9113062 9113083 -241574771 + AT_rich Low_complexity Low_complexity 1 21 0 4774 172 29 14 chr2 9113841 9114728 -241573126 - MER52A LTR ERV1 0 1755 881 358 198 0 99 chr2 9114726 9114847 -241573007 + MER52A LTR ERV1 125 233 -1522 * 262 316 51 35 chr2 9115115 9115316 -241572538 + MIR SINE MIR 32 230 -32 407 291 29 0 chr2 9115897 9116000 -241571854 - MIR3 SINE MIR -6 202 97 180 197 56 70 chr2 9115998 9116069 -241571785 + MIR SINE MIR 141 210 -52 * 289 119 0 0 chr2 9116255 9116297 -241571557 - tRNA-Cys-TGC tRNA tRNA -31 44 3 2355 83 0 0 chr2 9116744 9117034 -241570820 + AluSc SINE Alu 1 290 -19 1585 217 70 9 chr2 9117276 9117793 -241570061 - L1MEc LINE L1 -3563 2652 2141 1071 179 21 56 chr2 9117795 9118029 -241569825 - AluJo SINE Alu 0 312 87 4802 258 92 24 chr2 9118029 9118750 -241569104 - L1MEc LINE L1 -4248 2148 1478 2292 103 6 3 chr2 9118750 9119062 -241568792 - AluSq SINE Alu 0 313 1 4802 258 92 24 chr2 9119062 9120320 -241567534 - L1MEc LINE L1 -4918 1478 34 3608 144 104 17 chr2 9120577 9120733 -241567121 - L1MA7 LINE L1 -2 6289 6148 2255 94 0 3 chr2 9120733 9121031 -241566823 - AluSp SINE Alu -16 297 1 3608 144 104 17 chr2 9121031 9121058 -241566796 - L1MA7 LINE L1 -143 6148 6125 4235 168 56 92 chr2 9121058 9122334 -241565520 + Tigger3b DNA MER2_type 1 1230 -1 3608 144 104 17 chr2 9122334 9122900 -241564954 - L1MA7 LINE L1 -166 6125 5474 499 203 4 144 chr2 9123058 9123294 -241564560 - L1MC4 LINE L1 -3 8039 7837 492 247 43 19 chr2 9123331 9123493 -241564361 + L1ME3A LINE L1 5721 5886 -276 1021 128 7 7 chr2 9123502 9123651 -241564203 + AluJb SINE Alu 137 285 -27 302 338 85 52 chr2 9123653 9123925 -241563929 + L1ME3A LINE L1 5860 6140 -30 2079 126 0 3 chr2 9125182 9125476 -241562378 + AluJb SINE Alu 6 298 -14 207 0 0 0 chr2 9125773 9125796 -241562058 + (T)n Simple_repeat Simple_repeat 1 23 0 198 0 0 0 chr2 9126580 9126602 -241561252 + (A)n Simple_repeat Simple_repeat 1 22 0 488 272 83 18 chr2 9128138 9128307 -241559547 - MER5A DNA MER1_type -1 188 9 2146 154 25 18 chr2 9128950 9129347 -241558507 - L1MB3 LINE L1 0 6183 5784 961 185 100 0 chr2 9129420 9129620 -241558234 - L1MB3 LINE L1 -392 5791 5572 314 255 121 25 chr2 9129626 9129783 -241558071 - L1ME4a LINE L1 -1 6120 5949 261 315 27 27 chr2 9129787 9129933 -241557921 - L1ME4a LINE L1 -196 5925 5780 362 276 105 13 chr2 9129934 9130086 -241557768 + L1ME4a LINE L1 5738 5903 -218 363 314 189 30 chr2 9130146 9130211 -241557643 - L2 LINE L2 -561 2753 2700 1931 167 0 6 chr2 9130211 9130522 -241557332 + AluJb SINE Alu 1 309 -3 363 314 189 30 chr2 9130522 9130863 -241556991 - L2 LINE L2 -614 2700 2282 339 250 76 8 chr2 9130900 9131032 -241556822 + L1ME4a LINE L1 5974 6114 -7 292 225 0 50 chr2 9131047 9131144 -241556710 + L1ME4a LINE L1 5692 5771 -350 21 36 0 0 chr2 9131214 9131242 -241556612 + AT_rich Low_complexity Low_complexity 1 28 0 1927 235 56 43 chr2 9132197 9132802 -241555052 - L1ME3A LINE L1 0 6170 5558 2193 64 7 4 chr2 9133039 9133343 -241554511 - AluY SINE Alu 0 305 1 4348 116 49 1 chr2 9134070 9134745 -241553109 - L1PA15 LINE L1 0 6165 5459 24 0 0 0 chr2 9135810 9135834 -241552020 + AT_rich Low_complexity Low_complexity 1 24 0 283 284 71 0 chr2 9136683 9136810 -241551044 + L1ME4a LINE L1 5968 6103 -18 1714 177 0 37 chr2 9136846 9137145 -241550709 - AluJo SINE Alu -24 288 1 212 260 39 39 chr2 9137785 9137862 -241549992 - MIR SINE MIR -166 96 20 2444 80 0 6 chr2 9137991 9138304 -241549550 - AluY SINE Alu 0 311 1 293 191 0 0 chr2 9138549 9138596 -241549258 + L2 LINE L2 3218 3264 -8 238 240 0 0 chr2 9138884 9138934 -241548920 + L2 LINE L2 3263 3312 -1 189 229 47 151 chr2 9139318 9139576 -241548278 - L2 LINE L2 -230 3042 2812 1010 224 18 23 chr2 9139653 9139872 -241547982 - MIR SINE MIR -40 222 5 396 203 98 41 chr2 9140080 9140203 -241547651 - MIR SINE MIR -63 145 28 224 266 8 113 chr2 9141822 9141946 -241545908 + L2 LINE L2 2926 3036 -236 269 282 14 0 chr2 9142095 9142166 -241545688 + MIR SINE MIR 183 254 -8 284 301 32 41 chr2 9142179 9142302 -241545552 + L2 LINE L2 3151 3272 0 213 373 0 0 chr2 9142460 9142519 -241545335 + L3 LINE CR1 1504 1562 -15 196 293 69 0 chr2 9142664 9142722 -241545132 - MIR SINE MIR -59 149 88 535 175 0 0 chr2 9143363 9143460 -241544394 - L1MD3 LINE L1 -158 7837 7741 328 263 25 24 chr2 9143741 9143855 -241543999 + MIR SINE MIR 9 130 -78 282 109 91 0 chr2 9145123 9145178 -241542676 - L1MC/D LINE L1 -780 5462 5403 2856 212 111 11 chr2 9145192 9146181 -241541673 + L1ME1 LINE L1 5072 6158 -8 2226 98 6 28 chr2 9146786 9147103 -241540751 - AluSp SINE Alu -3 310 1 223 296 56 0 chr2 9147418 9147472 -241540382 - L2 LINE L2 -13 3300 3244 219 330 97 10 chr2 9147600 9147703 -241540151 - L2 LINE L2 -2 3270 3159 191 236 135 67 chr2 9147705 9147748 -241540106 - MIR3 SINE MIR -105 103 64 2758 10 0 0 chr2 9147748 9148047 -241539807 + AluYa5 SINE Alu 1 299 -12 191 236 135 67 chr2 9148047 9148092 -241539762 - MIR3 SINE MIR -144 64 9 467 228 0 78 chr2 9149377 9149557 -241538297 - L1MD3 LINE L1 -70 7925 7548 1577 242 82 50 chr2 9150081 9150717 -241537137 - L1MC4 LINE L1 -162 7880 7225 1869 149 4 4 chr2 9151074 9151349 -241536505 - AluJo SINE Alu -37 275 1 201 250 175 25 chr2 9151843 9151923 -241535931 + MIR3 SINE MIR 76 167 -41 315 345 61 20 chr2 9152045 9152193 -241535661 + MIR SINE MIR 12 165 -97 * 1463 224 49 75 chr2 9152188 9152776 -241535078 + L2 LINE L2 2726 3313 0 236 198 229 62 chr2 9152780 9152876 -241534978 + MIR SINE MIR 151 262 0 2085 120 24 0 chr2 9152922 9153214 -241534640 + AluSx SINE Alu 3 301 -11 2474 68 3 3 chr2 9153354 9153650 -241534204 + AluSp SINE Alu 1 296 -17 35 24 0 0 chr2 9155052 9155094 -241532760 + AT_rich Low_complexity Low_complexity 1 42 0 2409 72 7 0 chr2 9155117 9155409 -241532445 + AluY SINE Alu 1 294 -17 301 207 207 12 chr2 9155411 9155493 -241532361 - MIR SINE MIR -100 162 65 204 191 0 32 chr2 9155494 9155557 -241532297 + T-rich Low_complexity Low_complexity 1 61 0 236 380 0 25 chr2 9155995 9156158 -241531696 + (CCCG)n Simple_repeat Simple_repeat 2 160 0 383 333 0 27 chr2 9156192 9156375 -241531479 + (CCCA)n Simple_repeat Simple_repeat 1 178 0 * 495 314 0 30 chr2 9156351 9157147 -241530707 + (CCCG)n Simple_repeat Simple_repeat 1 771 0 191 277 0 21 chr2 9157692 9157739 -241530115 - MIR SINE MIR -144 64 19 2316 104 0 13 chr2 9158538 9158837 -241529017 + AluSq SINE Alu 2 296 -17 555 313 61 39 chr2 9159302 9159714 -241528140 + L1MEc LINE L1 778 1198 -5940 862 208 66 4 chr2 9159870 9160093 -241527761 - L1ME1 LINE L1 0 6178 5948 492 286 46 14 chr2 9160117 9160378 -241527476 + L1MEc LINE L1 1331 1467 -5392 2228 113 0 0 chr2 9160378 9160670 -241527184 + AluSx SINE Alu 1 292 -20 492 286 46 14 chr2 9160670 9160697 -241527157 + L1MEc LINE L1 1467 1492 -5367 2228 118 7 0 chr2 9161058 9161345 -241526509 - AluSx SINE Alu -23 289 1 676 298 106 12 chr2 9161520 9161842 -241526012 - L1ME1 LINE L1 -234 5887 5536 201 279 0 40 chr2 9162687 9162990 -241524864 + (CGGG)n Simple_repeat Simple_repeat 1 290 0 426 317 0 28 chr2 9163148 9163328 -241524526 + (CGGG)n Simple_repeat Simple_repeat 4 178 0 360 344 0 32 chr2 9163343 9163529 -241524325 + (CGGG)n Simple_repeat Simple_repeat 1 180 0 289 333 0 32 chr2 9163604 9163790 -241524064 + (CGGG)n Simple_repeat Simple_repeat 1 180 0 440 324 0 27 chr2 9163993 9164178 -241523676 + (CGGG)n Simple_repeat Simple_repeat 1 180 0 279 359 0 28 chr2 9164278 9164459 -241523395 + (CGGG)n Simple_repeat Simple_repeat 1 176 0 383 352 0 29 chr2 9164783 9165249 -241522605 + (CGGG)n Simple_repeat Simple_repeat 1 452 0 439 323 0 28 chr2 9165278 9165649 -241522205 + (CGGG)n Simple_repeat Simple_repeat 1 360 0 308 344 0 27 chr2 9165672 9165855 -241521999 + (TGGG)n Simple_repeat Simple_repeat 1 178 0 240 356 0 28 chr2 9165824 9166004 -241521850 + (CGGG)n Simple_repeat Simple_repeat 2 176 0 * 348 297 0 30 chr2 9166120 9166285 -241521569 + (CCCG)n Simple_repeat Simple_repeat 2 161 0 390 306 0 38 chr2 9166312 9166495 -241521359 + (CCCG)n Simple_repeat Simple_repeat 1 176 0 394 340 0 30 chr2 9166550 9167360 -241520494 + (CCCG)n Simple_repeat Simple_repeat 1 785 0 477 297 0 32 chr2 9167378 9167563 -241520291 + (CCCG)n Simple_repeat Simple_repeat 2 180 0 763 239 78 58 chr2 9168974 9169334 -241518520 - L1ME2 LINE L1 -9 6155 5789 3160 244 53 41 chr2 9169334 9170363 -241517491 + L1MC4 LINE L1 227 1268 -5274 1286 165 134 15 chr2 9170611 9170732 -241517122 + AluJo SINE Alu 1 106 -206 321 26 0 0 chr2 9170732 9170770 -241517084 + (TAA)n Simple_repeat Simple_repeat 2 39 0 1286 165 134 15 chr2 9170770 9170909 -241516945 + AluJo SINE Alu 106 292 -20 659 229 42 49 chr2 9171380 9171668 -241516186 + pTR5 LTR ERV1 743 1028 -1410 4685 104 20 40 chr2 9171851 9172553 -241515301 + LTR12 LTR ERV1 1 688 0 1129 223 34 10 chr2 9172600 9172956 -241514898 - ERVL-B2 LTR ERVL -5288 366 6 688 140 171 49 chr2 9172967 9173131 -241514723 - MLT2B2 LTR ERVL -12 503 320 340 193 181 0 chr2 9173165 9173248 -241514606 - LTR33 LTR ERVL -422 99 2 329 238 49 25 chr2 9173319 9173441 -241514413 - LTR33 LTR ERVL 0 521 397 474 305 5 63 chr2 9173708 9173931 -241513923 - L2 LINE L2 -27 3286 3077 849 289 48 38 chr2 9173934 9174328 -241513526 - ERVL LTR ERVL -2795 2969 2572 581 288 81 0 chr2 9174612 9174772 -241513082 - L2 LINE L2 -544 2770 2598 243 320 72 0 chr2 9174958 9175055 -241512799 - L2 LINE L2 -6 3266 3163 27 0 0 0 chr2 9176681 9176708 -241511146 + AT_rich Low_complexity Low_complexity 1 27 0 692 276 35 43 chr2 9177571 9177803 -241510051 + MIR SINE MIR 33 262 0 1764 188 0 7 chr2 9177844 9178132 -241509722 + AluJo SINE Alu 13 298 -14 207 170 43 0 chr2 9178234 9178281 -241509573 + A-rich Low_complexity Low_complexity 4 52 0 413 188 1 79 chr2 9179208 9179318 -241508536 + L1MC4 LINE L1 2206 7201 -1339 287 646 0 0 chr2 9179326 9179504 -241508350 + (TA)n Simple_repeat Simple_repeat 2 179 0 216 0 0 0 chr2 9179504 9179528 -241508326 + (CA)n Simple_repeat Simple_repeat 1 24 0 2381 81 13 3 chr2 9180103 9180412 -241507442 - AluSx SINE Alu 0 312 1 502 281 79 35 chr2 9180586 9180814 -241507040 + L2 LINE L2 3072 3309 -4 267 300 108 23 chr2 9182181 9182311 -241505543 - MIR3 SINE MIR -46 162 22 1829 140 48 24 chr2 9182350 9182642 -241505212 - AluJb SINE Alu -13 299 1 378 0 0 0 chr2 9184053 9184095 -241503759 + (TAA)n Simple_repeat Simple_repeat 2 43 0 1050 182 0 0 chr2 9184095 9184271 -241503583 + FRAM SINE Alu 1 174 -2 448 189 56 0 chr2 9184399 9184489 -241503365 + L1MC4 LINE L1 7472 7566 -974 1426 241 110 3 chr2 9184490 9185072 -241502782 + L1MC4 LINE L1 7713 8398 -142 272 180 0 0 chr2 9185073 9185123 -241502731 + L1MC4 LINE L1 8481 8530 -10 189 0 0 0 chr2 9185130 9185151 -241502703 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 651 306 5 5 chr2 9185376 9185575 -241502279 + MER58A DNA MER1_type 26 224 0 21 0 0 0 chr2 9186402 9186423 -241501431 + AT_rich Low_complexity Low_complexity 1 21 0 2380 90 3 7 chr2 9187955 9188256 -241499598 + AluSq SINE Alu 1 300 -13 2147 114 13 7 chr2 9188556 9188854 -241499000 + AluSx SINE Alu 1 300 -12 963 281 97 45 chr2 9189530 9190017 -241497837 + L1MEc LINE L1 37 548 -5848 475 177 104 10 chr2 9190203 9190299 -241497555 - AluSg1 SINE Alu -201 108 4 778 263 7 58 chr2 9190303 9190332 -241497522 + L1M4 LINE L1 3545 3574 -2572 1954 157 10 13 chr2 9190332 9190645 -241497209 + AluSx SINE Alu 1 312 0 778 263 7 58 chr2 9190645 9190923 -241496931 + L1M4 LINE L1 3574 3836 -2310 1473 185 49 28 chr2 9190926 9191212 -241496642 + AluJb SINE Alu 21 312 0 1289 275 56 26 chr2 9191256 9191398 -241496456 + L1M4 LINE L1 4752 4888 -1270 1930 149 3 23 chr2 9191398 9191700 -241496154 - AluSx SINE Alu -2 310 15 1289 275 56 26 chr2 9191700 9191985 -241495869 + L1M4 LINE L1 4888 5211 -947 1758 170 20 7 chr2 9191985 9192285 -241495569 + AluJo SINE Alu 1 304 -8 1289 275 56 26 chr2 9192285 9192497 -241495357 + L1M4 LINE L1 5211 5415 -743 294 227 6 3 chr2 9192498 9192563 -241495291 + AluJ/monomer SINE Alu 1 53 -250 * 830 135 0 23 chr2 9192562 9192695 -241495159 + THE1B LTR MaLR 235 364 0 792 221 181 18 chr2 9192699 9193025 -241494829 - L2 LINE L2 -1734 1580 1202 1725 249 94 50 chr2 9193046 9193512 -241494342 - Charlie7 DNA MER1_type -838 1774 1261 2653 50 0 0 chr2 9193512 9193815 -241494039 - AluY SINE Alu -8 303 1 1725 249 94 50 chr2 9193815 9194106 -241493748 - Charlie7 DNA MER1_type -1351 1261 984 2413 101 3 0 chr2 9194340 9194647 -241493207 + AluSx SINE Alu 1 308 -4 268 299 234 16 chr2 9195276 9195460 -241492394 - MIR SINE MIR 0 262 39 6722 117 26 15 chr2 9195894 9196767 -241491087 - L1MA2 LINE L1 0 6304 5442 2151 109 3 16 chr2 9196767 9197092 -241490762 - AluSc SINE Alu 0 309 1 6722 117 26 15 chr2 9197092 9198152 -241489702 - L1MA2 LINE L1 -862 5442 4342 2344 112 0 0 chr2 9198246 9198550 -241489304 - AluSx SINE Alu -8 304 1 23 33 0 0 chr2 9198602 9198632 -241489222 + AT_rich Low_complexity Low_complexity 1 30 0 2182 271 205 12 chr2 9198701 9199819 -241488035 - L2 LINE L2 -519 2795 1463 444 283 58 52 chr2 9199989 9200180 -241487674 + MIR SINE MIR 21 212 -50 265 294 92 8 chr2 9200791 9200910 -241486944 - MIR SINE MIR -64 144 16 980 78 0 0 chr2 9201243 9201559 -241486295 + AluSg SINE Alu 1 316 0 565 266 126 61 chr2 9201559 9202081 -241485773 + HAL1 LINE L1 1723 2278 -229 180 174 130 0 chr2 9202128 9202174 -241485680 + L2 LINE L2 2191 2242 -1072 1489 231 89 4 chr2 9202369 9202871 -241484983 - L1ME1 LINE L1 -11 6155 5567 512 183 16 0 chr2 9202871 9202997 -241484857 + CT-rich Low_complexity Low_complexity 3 130 0 1837 127 6 74 chr2 9203016 9203339 -241484515 - AluJo SINE Alu -6 306 6 3065 204 55 40 chr2 9203346 9203634 -241484220 - L1ME1 LINE L1 -585 5581 5299 2254 114 10 0 chr2 9203634 9203933 -241483921 - AluSx SINE Alu -10 302 1 3065 204 55 40 chr2 9203933 9204563 -241483291 - L1ME1 LINE L1 -867 5299 4637 733 179 7 57 chr2 9204563 9204703 -241483151 - FLAM_C SINE Alu 0 133 1 3065 204 55 40 chr2 9204703 9204930 -241482924 - L1ME1 LINE L1 -1529 4637 4415 204 40 0 0 chr2 9204942 9204967 -241482887 + (TG)n Simple_repeat Simple_repeat 1 25 0 285 75 0 0 chr2 9204967 9205007 -241482847 + (GA)n Simple_repeat Simple_repeat 2 41 0 2393 110 0 0 chr2 9205559 9205869 -241481985 + AluSg SINE Alu 1 310 0 22 35 0 0 chr2 9205892 9205921 -241481933 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 9206261 9206282 -241481572 + AT_rich Low_complexity Low_complexity 1 21 0 265 253 42 21 chr2 9207075 9207170 -241480684 - MIR SINE MIR -60 148 52 303 28 0 0 chr2 9207600 9207636 -241480218 + (TTTTA)n Simple_repeat Simple_repeat 5 40 0 2031 102 47 0 chr2 9207639 9207914 -241479940 - AluSq SINE Alu -25 288 1 2530 88 0 0 chr2 9207969 9208277 -241479577 - AluSx SINE Alu -4 308 1 323 280 50 0 chr2 9208500 9208600 -241479254 + MIR SINE MIR 117 221 -41 2264 108 0 22 chr2 9208692 9209006 -241478848 + AluSx SINE Alu 1 307 -5 205 292 124 18 chr2 9209127 9209240 -241478614 + MIR3 SINE MIR 69 193 -15 847 136 73 12 chr2 9209694 9209864 -241477990 - MSTC LTR MaLR -229 167 2 1378 137 5 0 chr2 9209915 9210119 -241477735 + MER2 DNA MER2_type 2 206 -139 1617 176 10 19 chr2 9210133 9210440 -241477414 - AluSx SINE Alu -8 304 1 34 34 0 17 chr2 9210440 9210468 -241477386 + AT_rich Low_complexity Low_complexity 1 28 -30 2405 86 0 3 chr2 9210468 9210771 -241477083 + AluSq SINE Alu 7 308 -5 34 34 0 17 chr2 9210771 9210801 -241477053 + AT_rich Low_complexity Low_complexity 28 58 0 256 208 57 0 chr2 9210801 9210854 -241477000 + MER2 DNA MER2_type 266 321 -24 220 385 99 0 chr2 9211060 9211273 -241476581 - MIR SINE MIR -13 249 16 204 139 0 47 chr2 9211276 9211319 -241476535 + (CCCCCG)n Simple_repeat Simple_repeat 2 42 0 873 88 0 61 chr2 9212085 9212214 -241475640 + FRAM SINE Alu 36 157 -155 2933 16 0 0 chr2 9212214 9212532 -241475322 + AluYb8 SINE Alu 1 318 0 873 88 0 61 chr2 9212532 9212549 -241475305 + FRAM SINE Alu 157 173 -3 315 123 92 15 chr2 9212589 9212654 -241475200 + MLT1C LTR MaLR 181 250 -217 2112 125 17 0 chr2 9212832 9213121 -241474733 - AluSg SINE Alu -16 294 1 766 231 43 70 chr2 9213225 9213792 -241474062 - L1MC5 LINE L1 -30 7931 7331 1955 90 128 0 chr2 9213803 9214069 -241473785 + AluSx SINE Alu 1 300 -12 256 140 0 70 chr2 9214072 9214129 -241473725 - L1MC5 LINE L1 -610 7351 7299 * 39028 73 17 10 chr2 9214121 9216390 -241471464 - L1PA6 LINE L1 -2 6152 3901 288 0 0 0 chr2 9216390 9216422 -241471432 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2265 82 0 0 chr2 9216424 9216705 -241471149 - AluY SINE Alu -30 281 1 39028 73 17 10 chr2 9216705 9220532 -241467322 - L1PA6 LINE L1 -2253 3901 12 255 250 0 83 chr2 9221527 9221635 -241466219 + L1P LINE L1 4951 5049 -1097 296 291 112 24 chr2 9221703 9221788 -241466066 + L1ME1 LINE L1 5255 5331 -2477 2646 56 0 0 chr2 9221788 9222094 -241465760 + AluY SINE Alu 1 306 -5 296 291 112 24 chr2 9222094 9222214 -241465640 + L1ME1 LINE L1 5331 5478 -2330 769 288 98 31 chr2 9222268 9222879 -241464975 - L2 LINE L2 0 3313 2656 1869 155 26 3 chr2 9222973 9223277 -241464577 - AluJb SINE Alu -1 311 1 21 0 0 0 chr2 9223286 9223307 -241464547 + AT_rich Low_complexity Low_complexity 1 21 0 2429 55 17 0 chr2 9223312 9223603 -241464251 - AluY SINE Alu -15 296 1 791 164 0 22 chr2 9223848 9223982 -241463872 - FLAM_C SINE Alu -2 131 1 1399 181 8 17 chr2 9223982 9224274 -241463580 + L1ME1 LINE L1 5575 5856 -312 690 178 55 7 chr2 9225039 9225185 -241462669 + MER5A DNA MER1_type 1 153 -36 2072 126 0 10 chr2 9225803 9226097 -241461757 + AluSx SINE Alu 5 295 -17 186 71 0 0 chr2 9228047 9228075 -241459779 + (TTTTG)n Simple_repeat Simple_repeat 4 31 0 362 293 149 14 chr2 9228669 9228884 -241458970 - MIR SINE MIR -4 258 15 205 356 30 10 chr2 9229447 9229548 -241458306 + L2 LINE L2 2900 3002 -270 2298 81 0 33 chr2 9230357 9230664 -241457190 + AluSx SINE Alu 1 297 -15 1239 259 72 98 chr2 9231835 9232502 -241455352 + L1MEc LINE L1 142 791 -5605 1980 134 24 3 chr2 9233331 9233621 -241454233 + AluSx SINE Alu 1 296 -16 1430 185 4 8 chr2 9233630 9233879 -241453975 + AluJb SINE Alu 35 282 -30 1985 123 3 3 chr2 9233886 9234193 -241453661 + AluSx SINE Alu 1 307 0 1863 158 7 20 chr2 9235521 9235824 -241452030 - AluJb SINE Alu -13 299 1 2212 87 10 27 chr2 9236430 9236729 -241451125 - AluSq SINE Alu -19 294 1 664 191 107 6 chr2 9237884 9238052 -241449802 + MER5A DNA MER1_type 1 185 -4 395 204 31 122 chr2 9238064 9238260 -241449594 - MER5B DNA MER1_type 0 178 1 560 236 185 34 chr2 9238951 9239129 -241448725 - MER58A DNA MER1_type -15 209 5 1613 139 93 14 chr2 9241090 9241370 -241446484 + AluJo SINE Alu 1 302 -10 1287 89 48 0 chr2 9241431 9241599 -241446255 - AluSg/x SINE Alu -9 303 128 2332 92 0 0 chr2 9241601 9241895 -241445959 - AluSq SINE Alu -19 294 1 2363 99 36 30 chr2 9242411 9242773 -241445081 + THE1B LTR MaLR 1 364 0 2163 112 0 7 chr2 9242981 9243275 -241444579 + AluSx SINE Alu 1 292 -20 425 189 57 9 chr2 9244574 9244680 -241443174 - MIR SINE MIR -74 188 78 2090 128 0 28 chr2 9244686 9245006 -241442848 - AluSq SINE Alu -2 311 1 236 287 11 32 chr2 9246407 9246501 -241441353 - MIR3 SINE MIR -115 93 2 2569 53 0 3 chr2 9250458 9250758 -241437096 + AluY SINE Alu 1 299 -12 194 211 0 26 chr2 9251311 9251349 -241436505 + L2 LINE L2 3211 3247 -25 260 95 0 0 chr2 9252665 9252707 -241435147 + L1MA5 LINE L1 6255 6296 -4 2125 112 0 13 chr2 9254179 9254484 -241433370 - AluSx SINE Alu -11 301 1 274 304 81 31 chr2 9254804 9255014 -241432840 - MIR SINE MIR 0 262 44 395 340 33 0 chr2 9255473 9255626 -241432228 - MIR3 SINE MIR -7 201 44 995 169 22 38 chr2 9257234 9257417 -241430437 + MER58A DNA MER1_type 44 223 -1 185 216 81 0 chr2 9257757 9257794 -241430060 - MIR3 SINE MIR -30 178 139 675 255 192 5 chr2 9259877 9260085 -241427769 + MIR SINE MIR 16 262 0 2289 96 0 0 chr2 9260131 9260443 -241427411 - AluSq SINE Alu -1 312 1 226 252 81 27 chr2 9260856 9260967 -241426887 + L1MC5 LINE L1 7791 7907 -54 1675 146 7 29 chr2 9262129 9262437 -241425417 + AluJb SINE Alu 11 311 -1 2239 78 0 7 chr2 9262891 9263186 -241424668 + AluSc SINE Alu 1 293 -16 1532 188 40 13 chr2 9263309 9263612 -241424242 + AluJo SINE Alu 1 311 -1 1068 148 13 91 chr2 9264062 9264292 -241423562 - AluJb SINE Alu -18 294 83 303 271 19 0 chr2 9264374 9264481 -241423373 + L1MC4 LINE L1 7934 8042 0 306 220 114 53 chr2 9267872 9268004 -241419850 - L1MD3 LINE L1 0 7995 7856 24 32 0 0 chr2 9268628 9268659 -241419195 + GC_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr2 9268703 9268727 -241419127 + GC_rich Low_complexity Low_complexity 1 24 0 23 33 0 0 chr2 9269065 9269095 -241418759 + GC_rich Low_complexity Low_complexity 1 30 0 235 301 5 54 chr2 9269229 9269415 -241418439 + C-rich Low_complexity Low_complexity 4 180 0 25 0 0 0 chr2 9269692 9269717 -241418137 + GC_rich Low_complexity Low_complexity 1 25 0 208 265 163 10 chr2 9269822 9269920 -241417934 - L2 LINE L2 -43 3270 3158 1832 247 166 31 chr2 9269964 9270823 -241417031 - L2 LINE L2 -338 2976 2002 2243 106 0 0 chr2 9271040 9271351 -241416503 - AluSx SINE Alu -1 311 1 280 244 56 0 chr2 9271379 9271469 -241416385 - MER113 DNA MER1_type? -420 101 7 459 293 110 62 chr2 9271662 9271952 -241415902 + L2 LINE L2 2966 3269 -3 1660 159 37 10 chr2 9272290 9272460 -241415394 - AluJb SINE Alu -8 304 121 192 77 0 0 chr2 9272460 9272486 -241415368 + (TG)n Simple_repeat Simple_repeat 2 27 0 1660 159 37 10 chr2 9272486 9272611 -241415243 - AluJb SINE Alu -191 121 1 2147 103 7 0 chr2 9272694 9272994 -241414860 + AluSx SINE Alu 2 303 -9 615 272 94 89 chr2 9273072 9273501 -241414353 - L1MC4a LINE L1 -1760 6048 5613 2035 122 0 0 chr2 9273501 9273797 -241414057 - AluSq SINE Alu -9 304 9 615 272 94 89 chr2 9273797 9274039 -241413815 - L1MC4a LINE L1 -2195 5613 5374 346 301 0 0 chr2 9274225 9274308 -241413546 + MIR SINE MIR 31 113 -95 188 270 167 16 chr2 9274354 9274480 -241413374 + L2 LINE L2 2955 3099 -173 325 236 176 23 chr2 9275017 9275188 -241412666 + MIR SINE MIR 34 231 -31 231 367 37 18 chr2 9275228 9275337 -241412517 + L2 LINE L2 3141 3251 -21 405 322 87 7 chr2 9275404 9275553 -241412301 - MIR SINE MIR -57 205 45 203 358 46 18 chr2 9326150 9326259 -241361595 - MER5A DNA MER1_type -30 159 48 298 297 0 0 chr2 9326304 9326378 -241361476 - MER5B DNA MER1_type 0 178 105 180 0 0 0 chr2 9326894 9326914 -241360940 + (T)n Simple_repeat Simple_repeat 1 20 0 2222 84 30 0 chr2 9327087 9327383 -241360471 + AluSq SINE Alu 1 305 -8 355 280 37 112 chr2 9327818 9328032 -241359822 + L1MEd LINE L1 867 1064 -5055 487 195 46 0 chr2 9328412 9328499 -241359355 + 7SLRNA srpRNA srpRNA 1 91 -229 1488 173 14 25 chr2 9329688 9329972 -241357882 + AluJo SINE Alu 11 291 -21 309 316 65 7 chr2 9330099 9330254 -241357600 + MLT1K LTR MaLR 357 520 -68 241 319 64 0 chr2 9330307 9330401 -241357453 - MIR SINE MIR -68 194 95 1904 131 7 13 chr2 9331188 9331358 -241356496 - AluSx SINE Alu -9 303 134 2222 97 3 0 chr2 9331358 9331657 -241356197 - AluSp SINE Alu -13 300 1 1904 131 7 13 chr2 9331657 9331791 -241356063 - AluSx SINE Alu -178 134 1 242 311 59 17 chr2 9331834 9331953 -241355901 + MIR SINE MIR 73 196 -66 549 241 45 75 chr2 9331973 9332016 -241355838 - L1MB8 LINE L1 -27 6151 6108 2136 106 7 0 chr2 9332016 9332308 -241355546 + AluSx SINE Alu 1 294 -18 549 241 45 75 chr2 9332308 9332463 -241355391 - L1MB8 LINE L1 -70 6108 5959 814 216 154 10 chr2 9333062 9333157 -241354697 + MER58 DNA MER1_type 1 81 -260 2268 87 3 6 chr2 9333157 9333468 -241354386 + AluY SINE Alu 1 310 -1 814 216 154 10 chr2 9333468 9333580 -241354274 + MER58 DNA MER1_type 81 238 -103 199 346 59 10 chr2 9334379 9334480 -241353374 + MIR3 SINE MIR 13 118 -90 207 0 0 0 chr2 9334968 9334991 -241352863 + (CTGGGG)n Simple_repeat Simple_repeat 2 24 0 374 289 209 13 chr2 9335001 9335606 -241352248 - L2 LINE L2 -9 3304 2564 2119 98 0 0 chr2 9336053 9336363 -241351491 - AluY SINE Alu 0 311 1 493 291 126 54 chr2 9336372 9336722 -241351132 + L2 LINE L2 2896 3270 -2 2247 79 10 0 chr2 9336865 9337156 -241350698 - AluSc SINE Alu -15 294 1 224 175 16 32 chr2 9338244 9338307 -241349547 + GA-rich Low_complexity Low_complexity 1 62 0 260 313 0 49 chr2 9338588 9338732 -241349122 + MER112 DNA MER1_type 118 254 -6 440 286 16 8 chr2 9339335 9339461 -241348393 - MIR SINE MIR -121 141 15 349 274 20 20 chr2 9339529 9339631 -241348223 + MER5B DNA MER1_type 77 178 0 2134 105 13 0 chr2 9340137 9340441 -241347413 - AluSc SINE Alu -1 308 1 1495 144 83 11 chr2 9340465 9340754 -241347100 - AluJo SINE Alu 0 308 1 474 222 0 0 chr2 9340765 9340846 -241347008 - AluJ/FLAM SINE Alu -228 84 4 903 281 106 59 chr2 9341017 9341053 -241346801 - HAL1b LINE L1 -461 887 854 2236 113 3 0 chr2 9341053 9341364 -241346490 + AluSx SINE Alu 1 312 0 903 281 106 59 chr2 9341364 9342111 -241345743 - HAL1b LINE L1 -494 854 67 2132 117 0 0 chr2 9342320 9342619 -241345235 - AluSx SINE Alu -13 299 1 888 129 0 0 chr2 9343222 9343354 -241344500 + AluSq/x SINE Alu 1 132 -181 2206 97 3 0 chr2 9343356 9343655 -241344199 + AluY SINE Alu 1 300 -11 2453 232 68 55 chr2 9343716 9344007 -241343847 - L1ME1 LINE L1 -5 6161 5875 2222 88 7 3 chr2 9344007 9344303 -241343551 - AluSq SINE Alu -16 297 1 2453 232 68 55 chr2 9344303 9344486 -241343368 - L1ME1 LINE L1 -291 5875 5696 2091 106 3 13 chr2 9344486 9344788 -241343066 - AluSg SINE Alu -11 299 1 2453 232 68 55 chr2 9344788 9345128 -241342726 - L1ME1 LINE L1 -470 5696 5322 2322 90 0 0 chr2 9345128 9345438 -241342416 - AluY SINE Alu -1 310 1 2453 232 68 55 chr2 9345438 9345663 -241342191 - L1ME1 LINE L1 -844 5322 5101 1889 154 20 0 chr2 9345667 9345973 -241341881 - AluSx SINE Alu 0 312 1 1182 148 118 4 chr2 9346003 9346240 -241341614 + L1M2 LINE L1 5509 5772 -540 2044 129 0 7 chr2 9346240 9346534 -241341320 + AluSx SINE Alu 1 292 -20 323 208 57 9 chr2 9346559 9346665 -241341189 - L1ME1 LINE L1 -1095 5051 4941 1045 196 30 4 chr2 9347021 9347256 -241340598 + L1MB4 LINE L1 5940 6180 0 2014 101 0 80 chr2 9347382 9347708 -241340146 + AluSx SINE Alu 1 300 -12 2373 66 3 3 chr2 9347879 9348184 -241339670 - AluSp SINE Alu -6 307 3 1396 74 133 0 chr2 9349327 9349530 -241338324 + MER30 DNA MER1_type 1 230 0 186 43 0 0 chr2 9349829 9349852 -241338002 + (ATTG)n Simple_repeat Simple_repeat 1 23 0 1566 149 18 21 chr2 9349853 9350134 -241337720 - AluJb SINE Alu -32 280 1 2410 73 0 6 chr2 9350203 9350520 -241337334 - AluYb8 SINE Alu -3 315 1 1113 263 77 27 chr2 9350527 9350968 -241336886 - L1ME3A LINE L1 -6 6164 5702 189 178 0 0 chr2 9351139 9351184 -241336670 + (TGAA)n Simple_repeat Simple_repeat 3 47 0 341 338 47 27 chr2 9351228 9351376 -241336478 - MIR SINE MIR -15 247 97 262 267 130 8 chr2 9351366 9351497 -241336357 + MIR SINE MIR 96 242 -20 * 190 261 43 0 chr2 9351532 9351578 -241336276 - MIR SINE MIR -174 88 41 306 232 14 0 chr2 9352812 9352881 -241334973 + MER103 DNA DNA 17 86 -80 1851 146 34 3 chr2 9354253 9354548 -241333306 - AluJb SINE Alu -8 304 1 381 206 0 0 chr2 9354786 9354888 -241332966 + (CA)n Simple_repeat Simple_repeat 1 102 0 270 311 61 2 chr2 9354965 9355084 -241332770 - MIR SINE MIR -56 152 28 286 276 92 10 chr2 9355558 9355656 -241332198 + MIR SINE MIR 11 116 -146 367 266 37 0 chr2 9355890 9355999 -241331855 + MIR3 SINE MIR 44 156 -52 344 136 15 30 chr2 9356684 9356750 -241331104 + MIR SINE MIR 81 145 -63 279 314 99 8 chr2 9356996 9357117 -241330737 + MIR SINE MIR 28 159 -103 417 190 0 0 chr2 9357192 9357292 -241330562 + (TG)n Simple_repeat Simple_repeat 1 100 0 436 262 160 27 chr2 9357402 9357627 -241330227 + MIR SINE MIR 8 262 0 1541 154 4 0 chr2 9358200 9358440 -241329414 - AluJb SINE Alu -71 241 1 218 329 150 7 chr2 9358857 9358997 -241328857 + L3 LINE CR1 1138 1297 -280 288 289 168 13 chr2 9359739 9359888 -241327966 - MIR SINE MIR -70 192 21 264 333 23 0 chr2 9360354 9360441 -241327413 + L2 LINE L2 3182 3270 -2 1091 160 14 89 chr2 9361241 9361522 -241326332 + MER31A LTR ERV1 216 475 -10 1867 139 13 30 chr2 9362164 9362467 -241325387 - AluJb SINE Alu -14 298 1 330 328 39 8 chr2 9364978 9365106 -241322748 - L2 LINE L2 -2 3311 3180 213 260 32 99 chr2 9365286 9365464 -241322390 + MIR SINE MIR 7 162 -46 640 217 14 0 chr2 9365942 9366085 -241321769 - MER45A DNA AcHobo -31 147 3 639 238 67 6 chr2 9366227 9366391 -241321463 + MIR SINE MIR 23 196 -66 925 240 93 13 chr2 9367155 9367468 -241320386 + MLT1A2 LTR MaLR 3 340 -34 1778 147 40 17 chr2 9367780 9368080 -241319774 + AluJo SINE Alu 1 307 -5 262 239 11 11 chr2 9368254 9368267 -241319587 - L1MA10 LINE L1 -1 6333 6321 1603 227 37 64 chr2 9368267 9368554 -241319300 - L1ME3 LINE L1 -4 6158 5865 3188 147 18 72 chr2 9368554 9368789 -241319065 - L1MB3 LINE L1 -7 6176 5930 1953 124 3 29 chr2 9368789 9369095 -241318759 - AluSx SINE Alu -14 298 1 3188 147 18 72 chr2 9369095 9369460 -241318394 - L1MB3 LINE L1 -253 5930 5613 2343 66 3 0 chr2 9369460 9369748 -241318106 - AluSp SINE Alu -15 298 10 3188 147 18 72 chr2 9369748 9369813 -241318041 - L1MB3 LINE L1 -570 5613 5546 1603 227 37 64 chr2 9369813 9370115 -241317739 - L1ME3 LINE L1 -297 5865 5585 2089 121 0 0 chr2 9370153 9370482 -241317372 + AluSx SINE Alu 1 329 0 927 266 84 12 chr2 9370546 9370881 -241316973 - L1MD2 LINE L1 -2 6357 5999 270 136 0 0 chr2 9370883 9370927 -241316927 + (TCCC)n Simple_repeat Simple_repeat 3 46 0 1176 143 0 0 chr2 9370939 9371107 -241316747 - AluSx SINE Alu -140 172 5 2366 54 0 17 chr2 9371111 9371409 -241316445 - AluY SINE Alu -12 299 7 2179 127 0 0 chr2 9371413 9371712 -241316142 - AluSx SINE Alu -13 299 1 1268 236 58 42 chr2 9371742 9371899 -241315955 - L1MD2 LINE L1 -365 5994 5841 2129 184 17 0 chr2 9371899 9372258 -241315596 + MLT1A1 LTR MaLR 1 365 0 1268 236 58 42 chr2 9372258 9372340 -241315514 - L1MD2 LINE L1 -518 5841 5762 2149 107 7 0 chr2 9372340 9372640 -241315214 - AluSx SINE Alu -10 302 1 1268 236 58 42 chr2 9372640 9372781 -241315073 - L1MD2 LINE L1 -597 5762 5607 284 218 0 0 chr2 9372791 9372846 -241315008 - Tigger5 DNA MER2_type 0 2323 2269 545 176 0 4 chr2 9372850 9372990 -241314864 - Tigger5 DNA MER2_type -2129 194 3 210 37 0 0 chr2 9373943 9373970 -241313884 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2041 121 3 0 chr2 9373974 9374256 -241313598 - AluSx SINE Alu -29 283 1 561 245 41 0 chr2 9374330 9374477 -241313377 - MIR SINE MIR -43 219 67 570 220 86 116 chr2 9374519 9374735 -241313119 - L1M4 LINE L1 -2884 3262 3025 242 114 0 0 chr2 9374735 9374770 -241313084 - Alu SINE Alu -207 95 61 570 220 86 116 chr2 9374770 9374891 -241312963 - L1M4 LINE L1 -3121 3025 2902 1925 153 0 6 chr2 9374942 9375255 -241312599 - AluJo SINE Alu -1 311 1 1460 130 0 49 chr2 9375320 9375593 -241312261 + AluSg/x SINE Alu 74 310 0 338 163 12 75 chr2 9375612 9375692 -241312162 + MLT1D LTR MaLR 393 505 0 696 161 0 9 chr2 9375730 9375842 -241312012 + FLAM_A SINE Alu 25 135 -7 1830 157 27 3 chr2 9376085 9376384 -241311470 + AluJo SINE Alu 1 306 -6 614 133 0 14 chr2 9376757 9376997 -241310857 + AluSx SINE Alu 1 292 -18 2398 70 0 13 chr2 9376997 9377310 -241310544 + AluY SINE Alu 1 309 -2 306 200 8 144 chr2 9377583 9377708 -241310146 - MER81 DNA DNA 0 114 7 240 291 58 0 chr2 9377963 9378049 -241309805 - MIR3 SINE MIR -27 181 91 200 292 14 56 chr2 9378078 9378150 -241309704 + MIR3 SINE MIR 4 72 -136 255 150 0 0 chr2 9378425 9378485 -241309369 + (GA)n Simple_repeat Simple_repeat 2 61 0 205 262 12 48 chr2 9378892 9378976 -241308878 + C-rich Low_complexity Low_complexity 1 81 0 335 282 0 13 chr2 9379335 9379413 -241308441 + MIR3 SINE MIR 81 157 -51 1533 72 0 43 chr2 9379436 9379644 -241308210 - AluSc SINE Alu -110 199 1 328 313 87 33 chr2 9379795 9379945 -241307909 + MIR SINE MIR 105 262 0 200 275 110 11 chr2 9380813 9380904 -241306950 + MIR SINE MIR 85 184 -78 889 196 16 37 chr2 9381070 9381259 -241306595 + MER5A DNA MER1_type 5 189 0 1254 226 36 33 chr2 9381434 9381796 -241306058 - MLT1B LTR MaLR -11 379 17 212 378 124 28 chr2 9382139 9382356 -241305498 - MIR SINE MIR -5 257 20 287 336 80 0 chr2 9382831 9382956 -241304898 + MIR SINE MIR 79 213 -49 327 330 52 0 chr2 9382985 9383082 -241304772 + L2 LINE L2 3159 3260 -12 844 142 17 17 chr2 9383120 9383296 -241304558 + (ATGGTG)n Simple_repeat Simple_repeat 1 176 0 954 157 0 0 chr2 9383305 9383483 -241304371 + (TGG)n Simple_repeat Simple_repeat 3 180 0 704 148 11 28 chr2 9383501 9383677 -241304177 + (ATGGTG)n Simple_repeat Simple_repeat 1 173 0 725 184 0 17 chr2 9383711 9383885 -241303969 + (ATGGTG)n Simple_repeat Simple_repeat 3 173 0 487 209 0 37 chr2 9383922 9384085 -241303769 + (ATGGTG)n Simple_repeat Simple_repeat 4 160 0 251 245 10 71 chr2 9384435 9384533 -241303321 + MIR SINE MIR 29 120 -142 267 314 81 0 chr2 9386348 9386472 -241301382 + LTR33 LTR ERVL 45 178 -343 288 336 33 0 chr2 9386588 9386710 -241301144 + LTR33 LTR ERVL 344 469 -52 191 261 76 43 chr2 9388057 9388149 -241299705 + MIR SINE MIR 43 137 -71 185 336 9 56 chr2 9388694 9388801 -241299053 - L2 LINE L2 -252 3020 2919 204 287 117 21 chr2 9390338 9390432 -241297422 + MIR SINE MIR 102 204 -58 1322 165 4 17 chr2 9391595 9391832 -241296022 - AluJb SINE Alu -15 297 64 1414 168 10 1 chr2 9391832 9392230 -241295624 - LTR19A LTR ERV1 -6 480 1 857 134 6 0 chr2 9392230 9392406 -241295448 - HERVFH19I LTR ERV1 0 7719 4796 * 7905 178 50 42 chr2 9392405 9392689 -241295165 - HERVFH19I LTR ERV1 -283 5417 5137 2477 71 3 0 chr2 9392689 9392999 -241294855 + AluY SINE Alu 1 311 0 7905 178 50 42 chr2 9392999 9393032 -241294822 - HERVFH19I LTR ERV1 -563 5137 5106 2044 131 3 0 chr2 9393032 9393322 -241294532 - AluSq SINE Alu -22 291 1 7905 178 50 42 chr2 9393322 9394054 -241293800 - HERVFH19I LTR ERV1 -594 5106 4382 2202 118 0 6 chr2 9394054 9394368 -241293486 + AluSx SINE Alu 1 312 0 7905 178 50 42 chr2 9394368 9395511 -241292343 - HERVFH19I LTR ERV1 -1318 4382 2865 2739 116 98 0 chr2 9395570 9396011 -241291843 - LTR19A LTR ERV1 0 486 3 486 149 0 0 chr2 9396013 9396087 -241291767 - AluJ/FLAM SINE Alu -238 74 1 670 240 36 26 chr2 9396463 9396655 -241291199 + MIR SINE MIR 14 207 -55 2080 108 0 7 chr2 9396658 9396946 -241290908 + AluSg SINE Alu 1 286 -24 237 33 0 0 chr2 9396946 9396976 -241290878 + (CATA)n Simple_repeat Simple_repeat 2 31 0 233 216 21 52 chr2 9397214 9397311 -241290543 + LTR67 LTR ERVL 442 535 -22 406 324 29 0 chr2 9397442 9397581 -241290273 - L2 LINE L2 -181 3091 2949 2106 125 0 3 chr2 9398869 9399182 -241288672 - AluSx SINE Alu 0 312 1 2093 77 0 0 chr2 9399191 9399452 -241288402 + AluY SINE Alu 38 298 -13 508 256 54 22 chr2 9399452 9399675 -241288179 + L1ME2 LINE L1 5598 5827 -337 310 300 147 10 chr2 9399682 9400164 -241287690 + L1MEc LINE L1 1150 1720 -856 664 357 108 18 chr2 9400233 9401145 -241286709 + L2 LINE L2 2313 3313 0 183 289 0 0 chr2 9401891 9401936 -241285918 + L2 LINE L2 2260 2304 -1010 2026 156 0 6 chr2 9402233 9402547 -241285307 - AluSx SINE Alu 0 312 1 399 127 0 0 chr2 9402765 9402828 -241285026 + (TG)n Simple_repeat Simple_repeat 2 64 0 183 389 49 14 chr2 9403289 9403433 -241284421 + L2 LINE L2 3082 3230 -42 1549 180 171 3 chr2 9403915 9404231 -241283623 + MLT1A2 LTR MaLR 3 371 -3 1427 260 101 10 chr2 9404233 9404638 -241283216 + L1ME3A LINE L1 4929 5296 -866 1992 147 0 0 chr2 9404638 9404937 -241282917 + AluSx SINE Alu 1 299 -13 1427 260 101 10 chr2 9404937 9405104 -241282750 + L1ME3A LINE L1 5296 5446 -716 2892 143 20 29 chr2 9405104 9405593 -241282261 + MER66B LTR ERV1 2 486 0 1427 260 101 10 chr2 9405593 9405864 -241281990 + L1ME3A LINE L1 5446 5853 -309 1834 166 13 0 chr2 9405923 9406231 -241281623 + AluJb SINE Alu 1 312 0 515 182 42 7 chr2 9406233 9406376 -241281478 + GA-rich Low_complexity Low_complexity 3 150 0 202 74 0 0 chr2 9406386 9406413 -241281441 + (GAAAA)n Simple_repeat Simple_repeat 1 27 0 2118 128 0 3 chr2 9406427 9406733 -241281121 + AluJb SINE Alu 1 305 -7 334 241 147 9 chr2 9406737 9406853 -241281001 + L1ME3A LINE L1 5976 6107 -63 495 83 48 36 chr2 9406859 9406928 -241280926 + LTR5 LTR ERVK 1 73 -896 2124 77 4 4 chr2 9406928 9407202 -241280652 - AluSp SINE Alu -39 274 1 495 83 48 36 chr2 9407202 9407216 -241280638 + LTR5 LTR ERVK 73 85 -884 383 21 0 0 chr2 9407216 9407264 -241280590 + AluSp/q SINE Alu 218 265 -38 595 88 0 0 chr2 9407264 9407344 -241280510 - LTR5 LTR ERVK -889 80 1 523 215 67 0 chr2 9407346 9407495 -241280359 - MER97a DNA MER1_type? -221 673 515 262 268 0 24 chr2 9407661 9407743 -241280111 - MER115 DNA AcHobo -613 80 1 1683 142 49 17 chr2 9408084 9408372 -241279482 - AluJo SINE Alu -9 303 7 205 324 59 0 chr2 9408793 9408861 -241278993 + MIR SINE MIR 81 152 -110 711 248 12 6 chr2 9409024 9409185 -241278669 + MER103 DNA DNA 3 164 -2 224 59 29 0 chr2 9409189 9409223 -241278631 + (TG)n Simple_repeat Simple_repeat 1 35 0 742 74 44 15 chr2 9409240 9409375 -241278479 + GA-rich Low_complexity Low_complexity 2 140 0 494 321 77 6 chr2 9411815 9411983 -241275871 - MIR SINE MIR -48 214 35 824 243 74 42 chr2 9412074 9412411 -241275443 + MLT1A1 LTR MaLR 1 348 -17 443 258 121 0 chr2 9412436 9412560 -241275294 - MIR SINE MIR -102 160 22 2502 51 0 13 chr2 9412729 9413041 -241274813 - AluY SINE Alu -3 308 1 3251 178 22 46 chr2 9413535 9414292 -241273562 + L1MB3 LINE L1 5417 6155 -28 3993 87 20 14 chr2 9415907 9416458 -241271396 + MER41A LTR ERV1 1 554 0 1362 211 111 75 chr2 9417854 9418234 -241269620 + MLT1C LTR MaLR 1 401 -66 1890 98 62 0 chr2 9418234 9418510 -241269344 - AluSx SINE Alu -19 293 1 1362 211 111 75 chr2 9418510 9418580 -241269274 + MLT1C LTR MaLR 401 467 0 520 242 43 12 chr2 9419885 9420046 -241267808 - MLT1F LTR MaLR -7 535 370 1488 154 68 39 chr2 9420209 9420489 -241267365 + AluJo SINE Alu 2 289 -23 2334 70 13 3 chr2 9420949 9421250 -241266604 - AluY SINE Alu -7 304 1 580 293 55 6 chr2 9421718 9421882 -241265972 + MER5B DNA MER1_type 2 173 -5 1790 161 3 3 chr2 9423260 9423552 -241264302 - AluJb SINE Alu -20 292 1 435 276 69 35 chr2 9423710 9423913 -241263941 + MLT1J2 LTR MaLR 240 449 -1 251 253 63 63 chr2 9423917 9424012 -241263842 + MIR SINE MIR 162 256 -6 293 251 30 133 chr2 9424214 9424274 -241263580 - MLT1K LTR MaLR 0 588 523 2136 112 0 28 chr2 9424274 9424596 -241263258 + AluSq SINE Alu 1 313 0 293 251 30 133 chr2 9424596 9424738 -241263116 - MLT1K LTR MaLR -65 523 407 319 322 202 8 chr2 9425244 9425502 -241262352 + L3 LINE CR1 1163 1470 -107 2113 89 0 92 chr2 9425999 9426337 -241261517 + AluSc SINE Alu 3 309 0 378 280 0 0 chr2 9426381 9426513 -241261341 + (TG)n Simple_repeat Simple_repeat 1 132 0 228 257 0 0 chr2 9426516 9426629 -241261225 + (TGAG)n Simple_repeat Simple_repeat 4 116 0 389 222 20 6 chr2 9426662 9427010 -241260844 + (TG)n Simple_repeat Simple_repeat 1 353 0 285 262 30 30 chr2 9427010 9427174 -241260680 + (TGAG)n Simple_repeat Simple_repeat 3 166 0 215 326 116 0 chr2 9428382 9428511 -241259343 + MIR SINE MIR 104 247 -15 391 304 9 7 chr2 9428532 9428659 -241259195 + MIR SINE MIR 16 138 -70 180 295 95 11 chr2 9428993 9429088 -241258766 - MIR SINE MIR -63 145 43 299 313 50 0 chr2 9431641 9431740 -241256114 - MIR3 SINE MIR -42 166 63 1825 162 14 0 chr2 9431927 9432217 -241255637 - AluJb SINE Alu -18 294 1 304 293 41 41 chr2 9435160 9435283 -241252571 + MIR3 SINE MIR 64 186 -22 256 344 0 22 chr2 9435972 9436062 -241251792 + MIR SINE MIR 174 261 -1 189 242 97 0 chr2 9436793 9436855 -241250999 - MIR SINE MIR -87 121 54 394 335 147 12 chr2 9436939 9437382 -241250472 + L2 LINE L2 2551 3053 -260 1870 261 60 7 chr2 9437492 9438027 -241249827 - L1MD1 LINE L1 -86 6262 5709 1280 344 203 19 chr2 9438028 9439538 -241248316 - L2 LINE L2 -605 2709 922 1407 164 23 34 chr2 9439550 9439813 -241248041 + AluJb SINE Alu 15 274 -38 306 263 20 10 chr2 9439838 9439937 -241247917 + L1MEd LINE L1 46 145 -5974 830 296 47 58 chr2 9440157 9440818 -241247036 + L1MEd LINE L1 602 1255 -4864 29 60 0 0 chr2 9440882 9440932 -241246922 + AT_rich Low_complexity Low_complexity 1 50 0 564 42 0 0 chr2 9440940 9441011 -241246843 + (TCTA)n Simple_repeat Simple_repeat 4 74 0 502 256 31 6 chr2 9441162 9441322 -241246532 + L1ME LINE L1 5389 5552 -610 6656 216 31 29 chr2 9441339 9441472 -241246382 - L1MD1 LINE L1 -769 5377 5246 2108 111 3 7 chr2 9441472 9441770 -241246084 + AluSg SINE Alu 14 310 0 6656 216 31 29 chr2 9441770 9443592 -241244262 - L1MD1 LINE L1 -900 5246 3419 352 336 0 0 chr2 9443611 9443742 -241244112 - L2 LINE L2 -2382 932 802 247 390 138 8 chr2 9443751 9444005 -241243849 + L2 LINE L2 2978 3264 -8 551 225 61 56 chr2 9444022 9444235 -241243619 - HAL1 LINE L1 -695 1812 1599 416 326 14 35 chr2 9444241 9444385 -241243469 - HAL1 LINE L1 -977 1530 1390 238 146 0 83 chr2 9444397 9444445 -241243409 - MER5A DNA MER1_type 0 189 146 230 98 0 49 chr2 9444448 9444489 -241243365 - MER5A DNA MER1_type -150 39 1 367 293 65 78 chr2 9444514 9444808 -241243046 - L1MC5 LINE L1 -199 7762 7473 1581 193 16 16 chr2 9444808 9445148 -241242706 - AluJo SINE Alu 0 342 3 797 254 119 28 chr2 9445159 9445596 -241242258 - HAL1 LINE L1 -1253 1254 778 191 146 24 0 chr2 9445596 9445637 -241242217 + (TG)n Simple_repeat Simple_repeat 1 42 0 231 250 36 88 chr2 9445640 9445832 -241242022 - HAL1 LINE L1 -1723 784 603 347 269 82 106 chr2 9445880 9446136 -241241718 - HAL1 LINE L1 -1987 520 271 2309 93 3 3 chr2 9446220 9446533 -241241321 - AluSq SINE Alu 0 313 1 332 225 0 0 chr2 9447766 9447837 -241240017 - MER53 DNA DNA -2 187 117 306 209 77 0 chr2 9447777 9447868 -241239986 + MER53 DNA DNA 24 121 -68 * 342 279 42 21 chr2 9448503 9448657 -241239197 - MIR SINE MIR -63 145 3 261 57 0 0 chr2 9450586 9450621 -241237233 + (CA)n Simple_repeat Simple_repeat 1 35 0 199 195 0 0 chr2 9451976 9452017 -241235837 - L2 LINE L2 0 3313 3273 242 305 34 68 chr2 9452035 9452153 -241235701 + MER81 DNA DNA 1 114 0 2309 105 0 0 chr2 9452256 9452562 -241235292 - AluSx SINE Alu -6 306 1 338 322 57 48 chr2 9453017 9453244 -241234610 - MIR SINE MIR -3 259 31 1451 113 0 0 chr2 9453919 9454123 -241233731 + AluSg/x SINE Alu 107 310 0 2439 149 29 0 chr2 9454415 9454824 -241233030 - MSTC LTR MaLR 0 428 8 2045 142 7 0 chr2 9454918 9455221 -241232633 - AluSx SINE Alu -7 305 1 853 295 101 47 chr2 9455555 9455982 -241231872 - MLT1J2 LTR MaLR 0 450 1 241 319 43 0 chr2 9456222 9456316 -241231538 - L2 LINE L2 -528 2786 2689 3957 45 0 14 chr2 9456782 9457269 -241230585 + L1PA5 LINE L1 5675 6154 0 1400 245 69 39 chr2 9458049 9458539 -241229315 - MLT1D LTR MaLR 0 505 1 187 284 45 0 chr2 9459131 9459198 -241228656 + MIR SINE MIR 78 147 -61 691 185 8 31 chr2 9459652 9459782 -241228072 + AluJo/FLAM SINE Alu 2 128 -174 1531 135 64 70 chr2 9459784 9460096 -241227758 + AluJb SINE Alu 3 312 0 1958 194 62 36 chr2 9461782 9462169 -241225685 + Charlie1b DNA MER1_type 1 405 -2356 2069 138 0 3 chr2 9462169 9462481 -241225373 - AluSq SINE Alu -1 312 2 1958 194 62 36 chr2 9462481 9462597 -241225257 + Charlie1b DNA MER1_type 405 517 -6 392 305 24 42 chr2 9462674 9462841 -241225013 + MIR SINE MIR 29 192 -70 361 258 32 0 chr2 9463415 9463508 -241224346 + MIR3 SINE MIR 61 156 -52 1807 160 7 3 chr2 9464375 9464669 -241223185 + AluJb SINE Alu 1 295 -17 218 267 11 0 chr2 9464755 9464845 -241223009 + (CA)n Simple_repeat Simple_repeat 2 92 0 528 254 0 0 chr2 9464865 9465042 -241222812 + (CA)n Simple_repeat Simple_repeat 1 177 0 1652 202 67 0 chr2 9465610 9465973 -241221881 + MLT1B LTR MaLR 1 466 -1 184 208 42 21 chr2 9466100 9466148 -241221706 + L2 LINE L2 3223 3271 -1 2190 104 0 0 chr2 9466149 9466446 -241221408 - AluSx SINE Alu -13 299 3 1346 268 107 16 chr2 9466880 9467377 -241220477 + MLT1F LTR MaLR 1 542 0 1645 159 10 7 chr2 9467447 9467736 -241220118 - AluJb SINE Alu -16 296 7 2029 67 50 18 chr2 9467944 9468227 -241219627 + AluY SINE Alu 1 292 -19 3849 108 45 69 chr2 9468445 9468979 -241218875 - MER41B LTR ERV1 0 635 118 2188 80 7 0 chr2 9468979 9469268 -241218586 + AluSc SINE Alu 19 309 0 3849 108 45 69 chr2 9469268 9469384 -241218470 - MER41B LTR ERV1 -517 118 1 209 229 83 0 chr2 9470001 9470049 -241217805 - L2 LINE L2 -1 3271 3220 254 373 49 35 chr2 9470538 9470822 -241217032 - L2 LINE L2 -736 2578 2291 233 330 33 0 chr2 9471768 9471859 -241215995 - MLT1J LTR MaLR -92 419 326 334 252 163 0 chr2 9471862 9471985 -241215869 - MLT1J2 LTR MaLR -307 143 1 207 404 60 6 chr2 9472188 9472354 -241215500 - L2 LINE L2 -1855 1459 1285 321 318 79 39 chr2 9472446 9472726 -241215128 - L2 LINE L2 -2361 953 663 589 266 87 0 chr2 9473012 9473196 -241214658 + MIR SINE MIR 14 213 -49 206 83 56 0 chr2 9473584 9473620 -241214234 + T-rich Low_complexity Low_complexity 2 39 0 2223 114 0 0 chr2 9473635 9473933 -241213921 + AluSx SINE Alu 1 298 -14 1901 127 3 24 chr2 9473933 9474224 -241213630 - AluSx SINE Alu -27 285 1 455 48 16 0 chr2 9474230 9474292 -241213562 + (TTTTC)n Simple_repeat Simple_repeat 3 65 0 861 211 6 34 chr2 9474304 9474479 -241213375 - AluJo SINE Alu -141 171 2 225 0 0 0 chr2 9474493 9474518 -241213336 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 1777 113 0 4 chr2 9474518 9474765 -241213089 - AluSx SINE Alu -66 246 1 1559 160 82 17 chr2 9477027 9477320 -241210534 + AluJo SINE Alu 1 312 0 182 323 48 0 chr2 9478334 9478396 -241209458 - MIR SINE MIR -63 145 81 205 296 31 41 chr2 9478626 9478753 -241209101 - MIR3 SINE MIR -52 156 68 315 267 75 25 chr2 9480599 9480719 -241207135 - L2 LINE L2 -1 3312 3187 736 220 23 0 chr2 9480825 9480998 -241206856 + MER96B DNA MER1_type? 1 177 -240 1581 161 68 0 chr2 9481397 9481677 -241206177 - AluJb SINE Alu -13 299 1 906 169 9 87 chr2 9481687 9481918 -241205936 - L1MB8 LINE L1 -3 6175 5963 914 270 88 47 chr2 9482141 9482504 -241205350 + MLT1J LTR MaLR 33 410 -101 657 266 8 55 chr2 9482535 9482772 -241205082 - L1ME1 LINE L1 -5 6161 5936 250 290 21 11 chr2 9482777 9482870 -241204984 + MLT1J LTR MaLR 414 507 -4 340 295 90 7 chr2 9482966 9483278 -241204576 - LTR16A LTR ERVL -12 438 45 22 35 0 0 chr2 9484170 9484199 -241203655 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr2 9484257 9484280 -241203574 + AT_rich Low_complexity Low_complexity 1 23 0 394 242 10 39 chr2 9484446 9484549 -241203305 - L1MC4 LINE L1 -1339 6983 1995 387 284 23 0 chr2 9484500 9484588 -241203266 + L1MC4 LINE L1 6614 6703 -1339 * 310 357 0 0 chr2 9484551 9484635 -241203219 - L1MC4 LINE L1 -1342 6700 6617 * 369 318 0 0 chr2 9484601 9484689 -241203165 + L1MC4 LINE L1 6615 6702 -1340 360 322 0 0 chr2 9484637 9484724 -241203130 - L1MC4 LINE L1 -1342 6700 6614 * 266 230 23 0 chr2 9484756 9484843 -241203011 + L1MC4 LINE L1 6614 6702 -1340 306 194 0 0 chr2 9484843 9484905 -241202949 + (CA)n Simple_repeat Simple_repeat 1 62 0 1888 139 7 0 chr2 9484915 9485203 -241202651 - AluSq SINE Alu -23 290 1 669 297 107 30 chr2 9485233 9485800 -241202054 - L1ME3A LINE L1 -247 5923 5308 1509 186 4 0 chr2 9485874 9486137 -241201717 + AluJo SINE Alu 37 300 -12 3900 179 27 27 chr2 9486284 9487469 -241200385 - L1MB7 LINE L1 -54 6130 4928 716 165 0 0 chr2 9487472 9487581 -241200273 + AluSp/q SINE Alu 190 298 -15 995 176 5 10 chr2 9487592 9487785 -241200069 - L1MB7 LINE L1 -1215 4931 4740 1018 157 35 0 chr2 9487852 9488024 -241199830 + MER5A DNA MER1_type 1 178 -11 993 156 85 5 chr2 9488044 9488255 -241199599 + MER33 DNA MER1_type 2 229 -95 3033 136 2 6 chr2 9488730 9489208 -241198646 - MER41B LTR ERV1 0 635 160 1261 91 6 0 chr2 9489370 9489546 -241198308 - MER41B LTR ERV1 -458 177 1 1897 121 0 11 chr2 9490047 9490327 -241197527 - AluJb SINE Alu -17 295 19 240 35 0 0 chr2 9490331 9490360 -241197494 + (T)n Simple_repeat Simple_repeat 1 29 0 180 300 60 30 chr2 9490372 9490472 -241197382 - MIR SINE MIR -64 198 96 1247 211 67 58 chr2 9490777 9491123 -241196731 - MLT1A2 LTR MaLR 0 374 26 208 351 75 11 chr2 9491813 9491907 -241195947 + MIR SINE MIR 47 146 -62 2851 184 13 0 chr2 9491963 9492518 -241195336 + L1MB3 LINE L1 4596 5157 -989 2037 98 0 0 chr2 9492545 9492872 -241194982 + AluSx SINE Alu 6 332 0 2408 149 16 24 chr2 9492872 9493325 -241194529 + L1MB3 LINE L1 5495 6172 -11 919 144 17 22 chr2 9493325 9493497 -241194357 + L1MB3 LINE L1 6005 6183 0 2408 149 16 24 chr2 9493497 9493509 -241194345 + L1MB3 LINE L1 6172 6183 0 1826 194 121 16 chr2 9493599 9494022 -241193832 + MLT1C LTR MaLR 1 467 0 501 291 22 6 chr2 9494576 9494758 -241193096 + MLT1J2 LTR MaLR 1 185 -265 26 64 0 0 chr2 9495711 9495758 -241192096 + GC_rich Low_complexity Low_complexity 1 47 0 22 35 0 0 chr2 9495958 9495987 -241191867 + GC_rich Low_complexity Low_complexity 1 29 0 245 197 0 42 chr2 9495999 9496070 -241191784 + C-rich Low_complexity Low_complexity 6 73 0 23 0 0 0 chr2 9496094 9496117 -241191737 + GC_rich Low_complexity Low_complexity 1 23 0 22 70 0 0 chr2 9496278 9496321 -241191533 + GC_rich Low_complexity Low_complexity 1 43 0 198 304 14 0 chr2 9496981 9497050 -241190804 + MIR SINE MIR 77 146 -62 22 0 0 0 chr2 9498410 9498432 -241189422 + AT_rich Low_complexity Low_complexity 1 22 0 633 259 68 18 chr2 9501454 9501674 -241186180 - L1MB7 LINE L1 -18 6166 5936 231 61 0 0 chr2 9502066 9502099 -241185755 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 577 219 42 8 chr2 9502111 9502230 -241185624 + FLAM_A SINE Alu 1 123 -10 1860 164 3 0 chr2 9502231 9502518 -241185336 - AluJo SINE Alu -19 293 6 195 267 65 40 chr2 9502528 9502647 -241185207 - MIR SINE MIR -67 141 23 811 188 2 14 chr2 9504945 9505468 -241182386 + (CAT)n Simple_repeat Simple_repeat 1 516 0 873 148 11 6 chr2 9505488 9505664 -241182190 + (CAT)n Simple_repeat Simple_repeat 1 177 0 835 169 0 22 chr2 9505640 9505824 -241182030 + (CACCAT)n Simple_repeat Simple_repeat 1 180 0 * 815 202 0 7 chr2 9505809 9506120 -241181734 + (CAT)n Simple_repeat Simple_repeat 1 308 0 * 263 258 56 45 chr2 9506846 9506935 -241180919 + MIR3 SINE MIR 103 192 -16 2389 88 0 10 chr2 9507040 9507345 -241180509 + AluSg SINE Alu 1 302 -8 2616 40 0 7 chr2 9508199 9508499 -241179355 + AluY SINE Alu 1 298 -13 398 255 103 14 chr2 9508547 9508692 -241179162 + L1ME4a LINE L1 5964 6121 0 2201 108 0 0 chr2 9508920 9509208 -241178646 + AluSx SINE Alu 7 294 -18 2177 137 0 0 chr2 9510607 9510907 -241176947 - AluSx SINE Alu -12 300 1 281 315 36 36 chr2 9510907 9511008 -241176846 - L2 LINE L2 -15 3298 3195 279 0 0 0 chr2 9512760 9512791 -241175063 + (GGGTG)n Simple_repeat Simple_repeat 4 34 0 264 59 0 0 chr2 9512921 9512955 -241174899 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 2167 101 156 6 chr2 9513442 9513807 -241174047 + MSTA LTR MaLR 2 421 -7 264 59 0 0 chr2 9513926 9513960 -241173894 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 249 291 95 76 chr2 9513963 9514173 -241173681 - L2 LINE L2 -27 3286 3073 2605 122 26 0 chr2 9514175 9514592 -241173262 - MSTA LTR MaLR 0 428 1 2420 172 13 37 chr2 9514642 9515183 -241172671 - L1MB7 LINE L1 -14 6170 5643 1707 208 0 0 chr2 9515200 9515512 -241172342 - AluJo SINE Alu 0 312 1 438 261 45 15 chr2 9515513 9515647 -241172207 - L2 LINE L2 -241 3072 2935 665 264 159 85 chr2 9515747 9516100 -241171754 + MLT1J LTR MaLR 234 508 -3 430 230 8 71 chr2 9516912 9517038 -241170816 - L2 LINE L2 0 3313 3196 223 264 72 56 chr2 9517567 9517692 -241170162 + MIR SINE MIR 32 158 -104 2382 90 3 34 chr2 9518000 9518322 -241169532 - AluSx SINE Alu 0 312 1 480 119 0 151 chr2 9518341 9518467 -241169387 - FRAM SINE Alu -18 158 52 223 311 151 8 chr2 9518528 9518647 -241169207 - MIR SINE MIR -66 196 61 385 311 78 36 chr2 9520596 9520789 -241167065 + MIR SINE MIR 50 250 -12 442 263 8 17 chr2 9521376 9521494 -241166360 - MIR SINE MIR -63 145 29 211 208 75 0 chr2 9521484 9521537 -241166317 + L2 LINE L2 3206 3262 -10 * 1694 181 36 5 chr2 9521541 9521993 -241165861 + MLT2B2 LTR ERVL 1 519 -1 30 0 0 0 chr2 9522161 9522191 -241165663 + AT_rich Low_complexity Low_complexity 1 30 0 732 140 9 0 chr2 9522196 9522310 -241165544 - FLAM_C SINE Alu -20 123 9 1280 246 82 19 chr2 9522392 9522855 -241164999 + MLT1D LTR MaLR 1 492 -13 1519 196 48 16 chr2 9523602 9523975 -241163879 - MLT1B LTR MaLR 0 390 6 890 253 145 15 chr2 9525759 9526159 -241161695 - MER31B LTR ERV1 -5 461 10 1526 194 16 44 chr2 9527393 9527500 -241160354 + AluJo SINE Alu 3 111 -201 189 0 0 0 chr2 9527500 9527521 -241160333 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1526 194 16 44 chr2 9527521 9527732 -241160122 + AluJo SINE Alu 111 312 0 353 224 94 151 chr2 9527737 9527885 -241159969 - L1ME2 LINE L1 -240 5924 5794 1958 134 29 0 chr2 9527885 9528162 -241159692 - AluJb SINE Alu -22 290 6 353 224 94 151 chr2 9528162 9528258 -241159596 - L1ME2 LINE L1 -370 5794 5694 1412 194 168 60 chr2 9528274 9528789 -241159065 + MLT1F1 LTR MaLR 1 566 -1 535 297 34 32 chr2 9528822 9529142 -241158712 - L1ME2 LINE L1 -517 5645 5326 248 263 15 36 chr2 9529399 9529536 -241158318 - L1ME2 LINE L1 -770 5376 5243 385 307 199 0 chr2 9529539 9529705 -241158149 - L1ME4a LINE L1 -218 5903 5705 969 257 34 81 chr2 9529705 9529928 -241157926 - MLT1I LTR MaLR 0 409 210 1777 176 0 26 chr2 9529928 9530241 -241157613 - AluJo SINE Alu -6 306 2 969 257 34 81 chr2 9530241 9530402 -241157452 - MLT1I LTR MaLR -199 210 43 281 281 61 53 chr2 9530728 9530842 -241157012 - MIR SINE MIR -71 191 77 1077 203 17 17 chr2 9531271 9531508 -241156346 + L1MB7 LINE L1 5894 6130 -54 348 294 59 10 chr2 9531587 9531689 -241156165 + MIR SINE MIR 75 181 -81 377 263 0 10 chr2 9532072 9532171 -241155683 - MIR SINE MIR 0 262 165 236 219 16 16 chr2 9532282 9532346 -241155508 + L1MC5 LINE L1 7844 7907 -54 1195 115 0 0 chr2 9532352 9532509 -241155345 - AluSg/x SINE Alu -22 290 134 1580 103 58 137 chr2 9532509 9532838 -241155016 - AluYb8 SINE Alu -15 303 1 346 178 28 9 chr2 9532873 9532951 -241154903 - MIR SINE MIR -84 178 100 263 316 41 10 chr2 9533380 9533478 -241154376 + MIR SINE MIR 66 166 -96 266 294 64 9 chr2 9533755 9533864 -241153990 - MIR SINE MIR -130 132 18 1838 144 36 4 chr2 9534387 9534664 -241153190 + AluJb SINE Alu 21 306 -6 1410 172 24 58 chr2 9535065 9535381 -241152473 + AluJo SINE Alu 1 306 0 239 244 51 0 chr2 9535771 9535849 -241152005 - L2 LINE L2 -329 2984 2903 404 169 12 36 chr2 9537882 9538048 -241149806 + (TCTCTG)n Simple_repeat Simple_repeat 6 167 0 420 228 0 0 chr2 9538087 9538258 -241149596 + CT-rich Low_complexity Low_complexity 2 172 0 390 162 34 34 chr2 9538231 9538410 -241149444 + (TCTCTG)n Simple_repeat Simple_repeat 2 180 0 * 404 239 115 8 chr2 9538486 9538616 -241149238 + MIR SINE MIR 62 205 -57 2026 146 14 0 chr2 9538654 9538942 -241148912 - AluJo SINE Alu -16 296 5 337 185 115 62 chr2 9538977 9539107 -241148747 - L1ME4a LINE L1 -3 6118 5982 209 129 0 48 chr2 9539188 9539250 -241148604 + (TG)n Simple_repeat Simple_repeat 1 59 0 2377 104 3 0 chr2 9541359 9541666 -241146188 + AluSx SINE Alu 3 310 -2 1853 166 0 48 chr2 9541671 9541984 -241145870 + AluJo SINE Alu 1 298 -14 2617 59 13 0 chr2 9542616 9542922 -241144932 + AluY SINE Alu 2 311 0 1864 132 75 4 chr2 9543509 9543789 -241144065 - AluJo SINE Alu -12 300 1 4035 155 46 9 chr2 9543789 9544665 -241143189 + L1MB8 LINE L1 5152 6058 -120 2002 162 0 3 chr2 9544665 9544974 -241142880 + AluJo SINE Alu 1 308 -4 2114 113 14 0 chr2 9545086 9545369 -241142485 - AluSx SINE Alu -2 310 24 274 333 0 11 chr2 9546295 9546382 -241141472 + MIR SINE MIR 60 145 -63 1895 135 26 26 chr2 9546747 9547051 -241140803 - AluJb SINE Alu -8 304 1 327 179 51 26 chr2 9547053 9547131 -241140723 + MER58 DNA MER1_type 174 253 -2167 303 255 103 49 chr2 9547245 9547449 -241140405 - L3 LINE CR1 -102 1475 1261 208 398 92 4 chr2 9548102 9548353 -241139501 - L2 LINE L2 -8 3264 2992 2950 6 0 0 chr2 9548359 9548670 -241139184 + AluYa5 SINE Alu 1 311 0 287 268 89 73 chr2 9549285 9549408 -241138446 - MIR SINE MIR -65 197 73 268 295 181 7 chr2 9549670 9549819 -241138035 - MIR SINE MIR -59 203 29 1450 132 5 0 chr2 9550107 9550312 -241137542 + AluJo SINE Alu 87 292 -20 288 235 4 12 chr2 9551450 9551532 -241136322 - FLAM SINE Alu -5 128 74 3132 142 55 110 chr2 9551536 9552366 -241135488 + LTR1 LTR ERV1 1 785 0 1993 111 31 14 chr2 9553607 9553896 -241133958 - AluSx SINE Alu -18 294 1 198 0 0 0 chr2 9554450 9554472 -241133382 + (GA)n Simple_repeat Simple_repeat 2 23 0 1973 151 31 0 chr2 9554906 9555197 -241132657 - AluSq SINE Alu -13 300 1 603 185 51 36 chr2 9555200 9555384 -241132470 - MIR SINE MIR -65 197 10 234 254 0 0 chr2 9556096 9556151 -241131703 - MIR SINE MIR -76 132 78 950 203 0 0 chr2 9556174 9556332 -241131522 + AluJb SINE Alu 147 304 -8 516 252 27 27 chr2 9556779 9556926 -241130928 + MER5A DNA MER1_type 38 184 -5 277 293 75 9 chr2 9556937 9557043 -241130811 + MIR SINE MIR 35 147 -115 1975 141 3 3 chr2 9557776 9558074 -241129780 - AluJb SINE Alu -14 298 1 2258 89 3 6 chr2 9559412 9559725 -241128129 - AluSx SINE Alu 0 312 1 1371 143 48 0 chr2 9560468 9560704 -241127150 - AluJo SINE Alu 0 310 65 330 268 0 0 chr2 9561070 9561193 -241126661 + (TG)n Simple_repeat Simple_repeat 2 124 0 526 268 6 3 chr2 9561266 9561580 -241126274 + (TG)n Simple_repeat Simple_repeat 1 315 0 273 290 187 0 chr2 9563993 9564100 -241123754 + MIR3 SINE MIR 33 159 -49 368 360 39 22 chr2 9565544 9565722 -241122132 - L2 LINE L2 -18 3254 3074 321 304 98 79 chr2 9568256 9568470 -241119384 - L1ME4a LINE L1 -30 6091 5874 558 335 66 12 chr2 9568748 9568990 -241118864 + MIR SINE MIR 2 256 -6 2169 145 124 0 chr2 9569083 9569462 -241118392 + MSTB LTR MaLR 1 426 0 364 188 124 0 chr2 9569507 9569624 -241118230 + L1ME1 LINE L1 6053 6184 0 2055 126 14 3 chr2 9569633 9569926 -241117928 - AluSx SINE Alu -16 296 1 309 249 29 58 chr2 9570026 9570244 -241117610 + (TATTG)n Simple_repeat Simple_repeat 1 211 0 225 0 0 0 chr2 9571413 9571438 -241116416 + (T)n Simple_repeat Simple_repeat 1 25 0 1007 275 41 9 chr2 9571581 9571923 -241115931 - MLT1A2 LTR MaLR -17 357 5 278 261 169 32 chr2 9571984 9572233 -241115621 - L1ME4a LINE L1 -8 6113 5831 1015 96 0 7 chr2 9572235 9572371 -241115483 + AluSq/x SINE Alu 1 135 -178 297 369 167 30 chr2 9572684 9573020 -241114834 + L3 LINE CR1 493 874 -703 688 288 73 67 chr2 9573818 9574134 -241113720 + L2 LINE L2 2954 3271 -1 4939 152 63 30 chr2 9574894 9575788 -241112066 + L1MC1 LINE L1 5411 6333 0 1806 142 4 0 chr2 9576280 9576555 -241111299 + AluJo SINE Alu 1 276 -36 2030 126 0 0 chr2 9576562 9576848 -241111006 - AluSx SINE Alu -22 290 5 210 71 0 0 chr2 9576867 9576895 -241110959 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 1009 164 36 76 chr2 9576935 9577160 -241110694 - MER20 DNA MER1_type -2 217 2 219 36 0 0 chr2 9577206 9577234 -241110620 + (CA)n Simple_repeat Simple_repeat 2 29 0 278 290 238 28 chr2 9577661 9577947 -241109907 - L2 LINE L2 -30 3242 2897 2084 80 76 0 chr2 9578029 9578304 -241109550 + AluSc SINE Alu 1 296 -13 186 271 212 42 chr2 9578506 9578624 -241109230 + MER5A DNA MER1_type 17 154 -35 246 289 106 0 chr2 9580958 9581062 -241106792 + MIR3 SINE MIR 47 161 -47 204 40 0 0 chr2 9581066 9581091 -241106763 + (TTTTC)n Simple_repeat Simple_repeat 5 29 0 1001 220 119 42 chr2 9582010 9582189 -241105665 + MLT1A2 LTR MaLR 1 165 -209 3231 150 10 2 chr2 9582189 9582668 -241105186 + MER66B LTR ERV1 1 483 -3 1001 220 119 42 chr2 9582668 9582824 -241105030 + MLT1A2 LTR MaLR 165 362 -12 744 298 59 12 chr2 9582829 9583168 -241104686 - L1ME3A LINE L1 -258 5912 5558 1071 186 70 64 chr2 9584613 9584941 -241102913 - L1MB7 LINE L1 0 6184 5855 2091 98 0 7 chr2 9584951 9585237 -241102617 - AluSg1 SINE Alu -25 284 1 1730 168 7 0 chr2 9585238 9585530 -241102324 - AluJo SINE Alu -18 294 1 494 238 79 0 chr2 9585530 9585694 -241102160 - L1M4 LINE L1 -2561 3585 3409 798 258 58 48 chr2 9585732 9585997 -241101857 - MIR SINE MIR 0 262 1 246 269 156 50 chr2 9586586 9586727 -241101127 - MIR3 SINE MIR -19 189 34 1749 189 0 0 chr2 9587024 9587331 -241100523 + AluJo SINE Alu 3 309 -3 1035 234 58 23 chr2 9587691 9587981 -241099873 + L1MC1 LINE L1 6013 6316 -17 1840 171 7 3 chr2 9587981 9588286 -241099568 - AluJb SINE Alu -6 306 1 1035 234 58 23 chr2 9588286 9588303 -241099551 + L1MC1 LINE L1 6316 6331 -2 414 0 0 0 chr2 9588303 9588349 -241099505 + (CA)n Simple_repeat Simple_repeat 2 47 0 322 193 174 28 chr2 9588545 9588654 -241099200 - L2 LINE L2 -3 3269 3145 562 266 23 60 chr2 9588872 9589090 -241098764 + MIR SINE MIR 21 226 -36 1431 84 0 0 chr2 9592398 9592796 -241095058 + (CCA)n Simple_repeat Simple_repeat 1 398 0 458 327 199 6 chr2 9593053 9593414 -241094440 - L2 LINE L2 -20 3293 2863 306 148 0 0 chr2 9593933 9593987 -241093867 + (CA)n Simple_repeat Simple_repeat 1 54 0 215 234 0 0 chr2 9594834 9594881 -241092973 - L2 LINE L2 -10 3262 3216 2294 81 10 0 chr2 9595081 9595389 -241092465 - AluSx SINE Alu -1 311 1 244 369 117 0 chr2 9595434 9595545 -241092309 + L2 LINE L2 3139 3262 -10 26 30 0 0 chr2 9596430 9596463 -241091391 + AT_rich Low_complexity Low_complexity 1 33 0 193 340 19 19 chr2 9596483 9596589 -241091265 - MIR3 SINE MIR -21 187 82 450 0 0 0 chr2 9596644 9596694 -241091160 + (TG)n Simple_repeat Simple_repeat 1 50 0 2043 108 4 0 chr2 9596694 9596972 -241090882 - AluSx SINE Alu -33 279 1 382 263 78 62 chr2 9598234 9598413 -241089441 - MIR SINE MIR -56 206 25 237 191 0 48 chr2 9600578 9600641 -241087213 - L2 LINE L2 -12 3260 3201 568 284 214 23 chr2 9600645 9600987 -241086867 - L2 LINE L2 -3 3310 2904 262 360 80 28 chr2 9601013 9601263 -241086591 - L2 LINE L2 -96 3176 2914 1236 199 40 46 chr2 9602081 9602407 -241085447 - MER33 DNA MER1_type 0 324 1 2085 115 10 10 chr2 9602967 9603279 -241084575 - AluSx SINE Alu 0 312 1 279 190 0 0 chr2 9603593 9603651 -241084203 + T-rich Low_complexity Low_complexity 1 58 0 389 310 155 34 chr2 9604954 9605193 -241082661 - HAL1 LINE L1 -1837 670 403 799 288 35 63 chr2 9605215 9605390 -241082464 - MLT1J2 LTR MaLR -2 448 270 764 262 15 34 chr2 9605390 9605596 -241082258 + MER105 DNA DNA 1 202 -2 799 288 35 63 chr2 9605596 9605847 -241082007 - MLT1J2 LTR MaLR -180 270 34 186 276 40 40 chr2 9605886 9605962 -241081892 + L2 LINE L2 204 279 -3035 198 262 0 0 chr2 9607218 9607260 -241080594 + MIR SINE MIR 35 76 -186 1785 163 15 66 chr2 9607474 9607867 -241079987 - MLT1B LTR MaLR -17 373 1 329 150 175 0 chr2 9609377 9609457 -241078397 - MLT1C LTR MaLR -369 98 5 567 140 20 20 chr2 9609715 9609815 -241078039 + FLAM_C SINE Alu 34 133 -10 2275 106 0 0 chr2 9610270 9610573 -241077281 + AluSq SINE Alu 1 303 -10 262 296 28 0 chr2 9610674 9610782 -241077072 - L1MC4a LINE L1 -1869 5939 5829 314 290 76 0 chr2 9610796 9610927 -241076927 - L1MC4a LINE L1 -2084 5724 5584 1616 186 21 0 chr2 9610961 9611246 -241076608 + AluJo SINE Alu 13 303 -9 1784 131 42 48 chr2 9611324 9611448 -241076406 + AluSx SINE Alu 1 124 -188 228 35 0 0 chr2 9611448 9611477 -241076377 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 1784 131 42 48 chr2 9611477 9611664 -241076190 + AluSx SINE Alu 124 310 -2 2237 112 0 3 chr2 9612117 9612431 -241075423 + AluSq SINE Alu 1 313 0 1419 171 91 25 chr2 9613399 9613685 -241074169 - AluSq SINE Alu -8 305 1 245 328 172 0 chr2 9613804 9613938 -241073916 - MIR SINE MIR -2 260 104 2033 129 10 0 chr2 9613953 9614247 -241073607 - AluSx SINE Alu -15 297 1 1881 161 3 0 chr2 9614621 9614920 -241072934 + AluJo SINE Alu 13 312 0 384 329 97 35 chr2 9615773 9616001 -241071853 - L1ME3 LINE L1 -1 6161 5920 241 298 53 10 chr2 9616439 9616558 -241071296 + MIR SINE MIR 38 159 -66 2474 53 0 3 chr2 9617000 9617300 -241070554 + AluY SINE Alu 1 299 -12 199 267 218 10 chr2 9617600 9617701 -241070153 + MIR SINE MIR 141 262 0 236 341 34 0 chr2 9618765 9618853 -241069001 - MIR SINE MIR -78 184 94 753 186 0 0 chr2 9621318 9621447 -241066407 - FLAM_A SINE Alu 0 133 5 232 214 36 0 chr2 9622357 9622413 -241065441 - MLT2A2 LTR ERVL -3 450 393 801 196 0 0 chr2 9622414 9622681 -241065173 + (TGGA)n Simple_repeat Simple_repeat 1 267 0 975 147 0 0 chr2 9622700 9622877 -241064977 + (TGGA)n Simple_repeat Simple_repeat 3 179 0 825 176 0 0 chr2 9622893 9623069 -241064785 + (TGGA)n Simple_repeat Simple_repeat 4 179 0 1053 206 142 55 chr2 9623077 9623513 -241064341 - MLT2B1 LTR ERVL -46 474 1 2284 89 13 0 chr2 9623812 9624114 -241063740 + AluY SINE Alu 1 306 -5 186 185 222 0 chr2 9624232 9624286 -241063568 - L3 LINE CR1 -408 1169 1104 287 309 37 0 chr2 9624612 9624693 -241063161 - L3 LINE CR1 -533 1044 961 511 299 86 8 chr2 9624731 9624969 -241062885 - MIR SINE MIR 0 262 15 187 93 47 0 chr2 9626359 9626402 -241061452 + (TG)n Simple_repeat Simple_repeat 1 45 0 310 162 54 24 chr2 9626421 9626721 -241061133 + (TG)n Simple_repeat Simple_repeat 1 309 0 330 118 45 56 chr2 9626755 9626933 -241060921 + (TG)n Simple_repeat Simple_repeat 1 176 0 200 220 50 10 chr2 9627607 9627707 -241060147 + (TG)n Simple_repeat Simple_repeat 1 104 0 293 245 11 43 chr2 9628512 9628606 -241059248 + MER53 DNA DNA 4 94 -95 * 419 248 38 0 chr2 9628526 9628631 -241059223 - MER53 DNA DNA -4 185 77 322 233 103 9 chr2 9629428 9629544 -241058310 + MIR3 SINE MIR 15 141 -67 236 337 45 28 chr2 9630651 9630829 -241057025 - L1MC4a LINE L1 -1838 5970 5790 353 258 212 23 chr2 9630891 9631151 -241056703 - L1MC4a LINE L1 -2140 5668 5324 1991 126 14 7 chr2 9631151 9631444 -241056410 + AluSx SINE Alu 1 295 -17 353 258 212 23 chr2 9631444 9631532 -241056322 - L1MC4a LINE L1 -2484 5324 5254 212 275 18 83 chr2 9631681 9631790 -241056064 + MER5A DNA MER1_type 70 171 -18 235 288 88 0 chr2 9631707 9631787 -241056067 - MER5B DNA MER1_type -70 108 22 1731 167 31 0 chr2 9634149 9634436 -241053418 - AluJb SINE Alu -16 296 1 2023 108 7 7 chr2 9635900 9636188 -241051666 - AluJb SINE Alu -12 300 13 2083 98 0 0 chr2 9638827 9639101 -241048753 - AluSx SINE Alu -15 297 24 2283 75 3 23 chr2 9639321 9639628 -241048226 - AluSp SINE Alu -12 301 1 21 82 0 0 chr2 9640169 9640218 -241047636 + AT_rich Low_complexity Low_complexity 1 49 0 27 49 0 0 chr2 9641229 9641270 -241046584 + GC_rich Low_complexity Low_complexity 1 41 0 21 0 0 0 chr2 9641389 9641410 -241046444 + GC_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr2 9641473 9641500 -241046354 + GC_rich Low_complexity Low_complexity 1 27 0 26 93 0 0 chr2 9641613 9641688 -241046166 + GC_rich Low_complexity Low_complexity 1 75 0 278 128 26 26 chr2 9641744 9641822 -241046032 + (CCCCG)n Simple_repeat Simple_repeat 4 81 0 22 0 0 0 chr2 9641871 9641893 -241045961 + GC_rich Low_complexity Low_complexity 1 22 0 366 244 12 0 chr2 9642769 9642851 -241045003 + MIR SINE MIR 42 124 -84 189 121 0 0 chr2 9642962 9642995 -241044859 + (TGAA)n Simple_repeat Simple_repeat 3 35 0 2170 116 13 0 chr2 9644024 9644325 -241043529 - AluSx SINE Alu -7 305 1 357 328 37 8 chr2 9644480 9644614 -241043240 + MIR3 SINE MIR 65 202 -6 186 43 0 0 chr2 9644770 9644793 -241043061 + (TTA)n Simple_repeat Simple_repeat 2 24 0 2021 112 0 0 chr2 9644801 9645077 -241042777 - AluSx SINE Alu -36 276 1 663 322 25 12 chr2 9645381 9645704 -241042150 + MARNA DNA Mariner 231 557 -29 2115 116 0 13 chr2 9645883 9646186 -241041668 - AluSx SINE Alu -13 299 1 258 262 68 19 chr2 9647412 9647515 -241040339 - L2 LINE L2 -25 3247 3140 183 100 0 0 chr2 9648161 9648191 -241039663 + (GGGAGA)n Simple_repeat Simple_repeat 3 32 0 427 301 75 0 chr2 9648481 9648667 -241039187 - MLT1L LTR MaLR -52 563 364 576 182 115 24 chr2 9648884 9649049 -241038805 + MLT1C LTR MaLR 1 180 -210 1382 161 4 37 chr2 9649049 9649292 -241038562 + AluJo SINE Alu 1 235 -77 1026 217 64 4 chr2 9649313 9649562 -241038292 + MLT1C LTR MaLR 199 462 -5 357 195 164 23 chr2 9649788 9649916 -241037938 + MLT1G LTR MaLR 443 588 -2 463 283 193 0 chr2 9650031 9650197 -241037657 + MIR SINE MIR 17 214 -48 2010 223 63 92 chr2 9650204 9650261 -241037593 - MER97a DNA MER1_type? -11 883 826 3156 77 36 32 chr2 9650261 9650703 -241037151 - MLT2A1 LTR ERVL 0 444 1 2010 223 63 92 chr2 9650703 9651552 -241036302 - MER97a DNA MER1_type? -68 826 3 2270 79 3 7 chr2 9651884 9652187 -241035667 + AluY SINE Alu 1 302 -9 2040 134 7 0 chr2 9653054 9653353 -241034501 - AluSx SINE Alu -9 303 3 798 227 0 45 chr2 9654568 9654686 -241033168 + MER3 DNA MER1_type 21 128 -81 2307 99 3 0 chr2 9654686 9654990 -241032864 - AluSq SINE Alu -8 305 1 798 227 0 45 chr2 9654990 9655069 -241032785 + MER3 DNA MER1_type 128 209 0 506 303 11 43 chr2 9655813 9655998 -241031856 + MIR3 SINE MIR 15 193 -15 571 265 46 7 chr2 9656215 9656366 -241031488 + MIR SINE MIR 20 176 -86 1043 113 0 0 chr2 9656434 9656575 -241031279 + AluJb SINE Alu 1 141 -171 189 0 0 0 chr2 9656593 9656614 -241031240 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 1597 139 44 26 chr2 9656632 9656905 -241030949 + AluJo SINE Alu 5 282 -30 459 78 0 0 chr2 9656999 9657063 -241030791 + (TCCC)n Simple_repeat Simple_repeat 4 67 0 883 143 88 42 chr2 9657162 9657379 -241030475 - L1MC2 LINE L1 -9 6335 6109 1428 149 0 69 chr2 9657390 9657666 -241030188 - AluJb SINE Alu -6 306 50 421 293 38 25 chr2 9657891 9658048 -241029806 + MER5B DNA MER1_type 11 169 -9 186 273 94 55 chr2 9658083 9658149 -241029705 + MER5B DNA MER1_type 36 98 -80 2052 121 17 0 chr2 9658149 9658447 -241029407 - AluSx SINE Alu -8 304 2 2656 50 0 0 chr2 9658457 9658754 -241029100 - AluY SINE Alu -14 297 1 186 273 94 55 chr2 9658754 9658804 -241029050 + MER5B DNA MER1_type 106 168 -10 1910 155 20 0 chr2 9659368 9659665 -241028189 + AluJo SINE Alu 1 303 -9 715 118 0 152 chr2 9660921 9660954 -241026900 - L1MB5 LINE L1 -10 6164 6128 225 0 0 0 chr2 9660954 9660979 -241026875 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 2100 127 0 0 chr2 9660979 9661262 -241026592 - AluSx SINE Alu -29 283 1 715 118 0 152 chr2 9661262 9661291 -241026563 - L1MB5 LINE L1 -45 6129 6097 2336 74 3 0 chr2 9661291 9661597 -241026257 + AluSp SINE Alu 1 307 0 715 118 0 152 chr2 9661597 9661708 -241026146 - L1MB5 LINE L1 -77 6097 6014 1936 149 3 14 chr2 9661756 9662051 -241025803 - AluJo SINE Alu -20 292 1 491 229 186 32 chr2 9663685 9663873 -241023981 - MIR SINE MIR -17 245 29 468 258 94 52 chr2 9664215 9664428 -241023426 + MIR SINE MIR 20 241 -21 649 244 34 11 chr2 9664720 9664896 -241022958 + MIR SINE MIR 36 215 -47 23 54 0 0 chr2 9665055 9665092 -241022762 + AT_rich Low_complexity Low_complexity 1 37 0 204 316 25 0 chr2 9665167 9665246 -241022608 - MIR SINE MIR -29 233 153 1900 161 3 7 chr2 9665922 9666227 -241021627 - AluJb SINE Alu -8 304 1 2729 40 0 0 chr2 9667070 9667372 -241020482 - AluY SINE Alu -9 302 1 704 103 154 0 chr2 9667673 9667790 -241020064 - AluJb SINE Alu -176 136 2 188 290 14 0 chr2 9668368 9668437 -241019417 - MIR SINE MIR -61 147 78 517 127 59 3 chr2 9669854 9670074 -241017780 + AluSx SINE Alu 1 308 -4 608 246 24 12 chr2 9670232 9670399 -241017455 + MER20 DNA MER1_type 36 204 -15 261 98 0 0 chr2 9670470 9670511 -241017343 + (TTCA)n Simple_repeat Simple_repeat 4 44 0 245 300 71 41 chr2 9670565 9670735 -241017119 - L2 LINE L2 -101 3171 2997 254 300 25 0 chr2 9671748 9671828 -241016026 + L2 LINE L2 2997 3078 -194 330 298 141 16 chr2 9672998 9673189 -241014665 - MIR SINE MIR 0 262 48 1058 189 0 0 chr2 9673260 9673424 -241014430 - AluJo SINE Alu -14 298 135 318 50 0 0 chr2 9673425 9673465 -241014389 + (TTTTC)n Simple_repeat Simple_repeat 1 40 0 374 183 0 12 chr2 9673476 9673558 -241014296 + CT-rich Low_complexity Low_complexity 2 82 0 366 357 138 19 chr2 9673558 9673981 -241013873 - HAL1 LINE L1 -1206 1301 881 637 197 7 7 chr2 9673982 9674134 -241013720 + CT-rich Low_complexity Low_complexity 1 152 0 333 177 76 13 chr2 9674134 9674213 -241013641 - AluJo SINE Alu -169 133 50 187 98 0 49 chr2 9674224 9674265 -241013589 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 530 228 49 0 chr2 9674267 9674390 -241013464 - AluJo SINE Alu -173 129 1 421 304 30 0 chr2 9674786 9674921 -241012933 + MLT1H LTR MaLR 406 544 -5 2987 241 70 14 chr2 9675367 9676126 -241011728 - MER21B LTR ERV1 -44 819 19 267 238 60 12 chr2 9676124 9676208 -241011646 - MER21B LTR ERV1 -757 106 19 * 373 186 10 98 chr2 9676207 9676309 -241011545 - MER21B LTR ERV1 -758 105 13 448 297 145 56 chr2 9676729 9677248 -241010606 - L1ME4a LINE L1 -104 6017 5401 2320 122 0 0 chr2 9677248 9677560 -241010294 + AluSx SINE Alu 1 312 0 448 297 145 56 chr2 9677560 9677723 -241010131 - L1ME4a LINE L1 -720 5401 5254 390 314 66 39 chr2 9678023 9678281 -241009573 - L1ME4a LINE L1 -1276 4870 4606 694 167 0 9 chr2 9678292 9678406 -241009448 + FLAM_C SINE Alu 14 126 -17 43 20 0 0 chr2 9678417 9678467 -241009387 + AT_rich Low_complexity Low_complexity 1 50 0 494 297 100 46 chr2 9678467 9679138 -241008716 - L1ME4a LINE L1 -1526 4620 3914 315 0 0 0 chr2 9679151 9679186 -241008668 + (TG)n Simple_repeat Simple_repeat 1 35 0 308 209 185 61 chr2 9679356 9679653 -241008201 + L1ME4a LINE L1 5788 6121 0 377 294 14 25 chr2 9679950 9680124 -241007730 + MIR SINE MIR 17 188 -60 917 263 58 11 chr2 9681793 9682158 -241005696 - HAL1 LINE L1 -1126 1381 1000 247 279 93 66 chr2 9682262 9682393 -241005461 - HAL1 LINE L1 -1651 856 717 2726 36 0 7 chr2 9682393 9682700 -241005154 - AluY SINE Alu -6 305 1 247 279 93 66 chr2 9682700 9682751 -241005103 - HAL1 LINE L1 -1790 717 669 2214 128 0 6 chr2 9683698 9684011 -241003843 - AluSx SINE Alu -1 311 1 273 324 46 17 chr2 9684356 9684529 -241003325 + L3 LINE CR1 1056 1233 -344 2741 205 13 8 chr2 9684546 9685160 -241002694 + L1MB7 LINE L1 4465 5081 -1065 1485 114 5 0 chr2 9685188 9685381 -241002473 + AluSq SINE Alu 1 194 -119 2415 162 54 2 chr2 9685420 9685901 -241001953 + L1MB7 LINE L1 5660 6165 -19 2362 108 0 3 chr2 9686050 9686355 -241001499 + AluSq SINE Alu 1 304 -9 380 290 30 77 chr2 9686375 9686544 -241001310 + L3 LINE CR1 1415 1575 -2 345 227 0 52 chr2 9687427 9687524 -241000330 - MIR SINE MIR -78 130 39 910 140 11 11 chr2 9688137 9688316 -240999538 + CT-rich Low_complexity Low_complexity 2 180 0 223 147 0 0 chr2 9688316 9688350 -240999504 + (TTCC)n Simple_repeat Simple_repeat 3 36 0 1071 261 70 6 chr2 9688352 9688666 -240999188 - L1ME LINE L1 -357 5807 5474 2090 102 7 21 chr2 9689442 9689754 -240998100 - AluSx SINE Alu 0 309 2 307 247 34 0 chr2 9690343 9690432 -240997422 - L1MC5 LINE L1 -62 7899 7808 822 157 0 15 chr2 9690586 9690720 -240997134 + FLAM_C SINE Alu 1 132 -1 447 285 99 17 chr2 9690772 9690944 -240996910 - MIR SINE MIR -15 247 62 21 36 0 0 chr2 9691200 9691228 -240996626 + GC_rich Low_complexity Low_complexity 1 28 0 222 37 0 0 chr2 9691727 9691754 -240996100 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 2213 137 0 0 chr2 9691773 9692080 -240995774 + AluSx SINE Alu 1 307 -5 315 254 0 0 chr2 9692115 9692182 -240995672 - MIR SINE MIR -106 156 90 360 233 78 0 chr2 9692193 9692283 -240995571 - MER91A DNA MER1_type -11 185 89 384 262 37 9 chr2 9692759 9692866 -240994988 + L3 LINE CR1 1377 1486 -91 593 269 88 0 chr2 9693727 9693898 -240993956 + MIR SINE MIR 77 262 0 325 234 72 36 chr2 9696908 9697019 -240990835 + MIR SINE MIR 65 179 -83 2239 114 10 0 chr2 9697245 9697551 -240990303 + AluSg SINE Alu 1 309 -1 230 312 18 37 chr2 9697940 9698049 -240989805 + MIR3 SINE MIR 93 199 -9 196 259 37 0 chr2 9699173 9699227 -240988627 + MER5A DNA MER1_type 60 115 -74 1917 123 0 49 chr2 9699278 9699586 -240988268 + AluSx SINE Alu 1 293 -19 520 303 135 14 chr2 9700724 9701021 -240986833 + L1ME4a LINE L1 5534 5866 -255 1701 110 0 9 chr2 9701022 9701250 -240986604 - AluJb SINE Alu -15 297 72 7386 210 60 34 chr2 9701250 9702137 -240985717 + L1ME1 LINE L1 3439 4301 -1865 1846 178 3 3 chr2 9702137 9702441 -240985413 + AluJb SINE Alu 1 304 -8 7386 210 60 34 chr2 9702441 9704193 -240983661 + L1ME1 LINE L1 4301 6160 -6 339 281 0 73 chr2 9705147 9705311 -240982543 + L1ME4a LINE L1 5967 6118 -3 387 0 0 0 chr2 9705315 9705358 -240982496 + (GA)n Simple_repeat Simple_repeat 1 43 0 252 0 0 0 chr2 9705357 9705385 -240982469 + (TG)n Simple_repeat Simple_repeat 2 29 0 * 463 216 114 17 chr2 9705703 9705917 -240981937 - L1ME3 LINE L1 -9 6161 5902 268 213 0 43 chr2 9705920 9706108 -240981746 + (TA)n Simple_repeat Simple_repeat 1 180 0 217 203 0 41 chr2 9706120 9706243 -240981611 + (TA)n Simple_repeat Simple_repeat 2 119 0 794 300 92 13 chr2 9706262 9706642 -240981212 - L1ME3 LINE L1 -254 5916 5507 2282 105 10 0 chr2 9706835 9707141 -240980713 + AluSx SINE Alu 1 309 -3 425 270 93 39 chr2 9707679 9707883 -240979971 + MIR SINE MIR 45 259 -3 209 300 120 27 chr2 9708385 9708535 -240979319 + MIR3 SINE MIR 7 170 -38 1193 284 40 55 chr2 9709061 9709632 -240978222 - L1MEd LINE L1 -4869 1250 691 2352 112 0 3 chr2 9709632 9709936 -240977918 - AluSc SINE Alu -6 303 1 1193 284 40 55 chr2 9709936 9710218 -240977636 - L1MEd LINE L1 -5428 691 406 613 286 133 49 chr2 9710600 9710985 -240976869 - MLT1L LTR MaLR 0 615 199 769 64 54 25 chr2 9711278 9711593 -240976261 + (CA)n Simple_repeat Simple_repeat 1 324 0 643 76 64 18 chr2 9711606 9711777 -240976077 + (CA)n Simple_repeat Simple_repeat 2 180 0 462 119 63 13 chr2 9711809 9711968 -240975886 + (CA)n Simple_repeat Simple_repeat 2 168 0 441 334 85 23 chr2 9712624 9712946 -240974908 + L2 LINE L2 2931 3312 -1 303 287 45 38 chr2 9712973 9713130 -240974724 + L1ME4a LINE L1 5830 5987 -134 1666 196 17 26 chr2 9713666 9714013 -240973841 - MLT1A2 LTR MaLR -7 367 24 180 0 0 0 chr2 9714336 9714356 -240973498 + (GGGA)n Simple_repeat Simple_repeat 2 21 0 365 285 46 31 chr2 9714554 9714684 -240973170 + MLT1B LTR MaLR 235 366 -24 291 279 95 7 chr2 9715554 9715701 -240972153 + (CCCCG)n Simple_repeat Simple_repeat 5 164 0 367 247 137 47 chr2 9716831 9717086 -240970768 - MLT1D LTR MaLR -144 361 84 244 250 22 76 chr2 9717792 9717884 -240969970 + MIR3 SINE MIR 101 187 -21 1178 143 46 6 chr2 9717901 9718277 -240969577 - MSTB LTR MaLR 0 426 1 253 346 59 7 chr2 9718281 9718417 -240969437 - MIR SINE MIR -12 250 108 233 276 75 0 chr2 9719436 9719549 -240968305 - MIR SINE MIR -69 139 30 2378 83 3 0 chr2 9720154 9720456 -240967398 - AluSx SINE Alu -9 303 1 580 237 52 65 chr2 9720547 9720779 -240967075 + MIR SINE MIR 23 251 -11 1571 256 81 5 chr2 9720855 9721276 -240966578 - MLT1J LTR MaLR -58 453 1 2058 112 7 0 chr2 9721331 9721625 -240966229 - AluY SINE Alu -15 296 1 2288 54 3 45 chr2 9721634 9721947 -240965907 - AluY SINE Alu -11 300 1 1750 120 6 70 chr2 9722236 9722552 -240965302 + AluJb SINE Alu 1 296 -16 318 298 118 45 chr2 9722555 9722800 -240965054 + L1ME4a LINE L1 5812 6074 -47 2205 81 3 10 chr2 9723096 9723391 -240964463 - AluSq SINE Alu -16 297 5 1872 140 20 3 chr2 9723396 9723689 -240964165 - AluSx SINE Alu -14 298 1 237 222 0 0 chr2 9723980 9724025 -240963829 + MIR3 SINE MIR 112 156 -52 471 189 0 115 chr2 9724494 9724616 -240963238 + FLAM_A SINE Alu 1 108 -34 2250 103 3 0 chr2 9724757 9725068 -240962786 + AluSq SINE Alu 1 312 -1 1853 208 84 18 chr2 9725337 9725775 -240962079 + MLT1C LTR MaLR 1 467 0 482 319 65 10 chr2 9725929 9726199 -240961655 - ERVL LTR ERVL -1974 3550 3210 2055 139 0 0 chr2 9726535 9726844 -240961010 - AluSx SINE Alu -2 310 2 441 237 65 53 chr2 9728444 9728613 -240959241 + MIR SINE MIR 20 190 -72 308 299 331 0 chr2 9728654 9728811 -240959043 - MIR SINE MIR -48 214 6 240 298 32 48 chr2 9729093 9729217 -240958637 - MIR SINE MIR -68 194 73 220 226 16 16 chr2 9729923 9729985 -240957869 - MER5B DNA MER1_type -110 68 7 1700 78 5 0 chr2 9730467 9730686 -240957168 + AluSg/x SINE Alu 80 299 -11 2212 101 0 7 chr2 9731310 9731618 -240956236 + AluSq SINE Alu 1 306 -7 1619 158 13 43 chr2 9732027 9732331 -240955523 + AluJo SINE Alu 1 295 -17 369 209 6 122 chr2 9732377 9732549 -240955305 + Charlie7 DNA MER1_type 317 468 -2144 2076 257 64 43 chr2 9732566 9733282 -240954572 + MER21B LTR ERV1 22 752 -111 3418 236 111 90 chr2 9733315 9733640 -240954214 + Charlie7 DNA MER1_type 523 840 -1772 2137 99 6 16 chr2 9733640 9733953 -240953901 - AluY SINE Alu -1 310 1 3418 236 111 90 chr2 9733953 9733975 -240953879 + Charlie7 DNA MER1_type 840 860 -1752 1808 136 7 20 chr2 9733975 9734276 -240953578 - AluJo SINE Alu -15 297 1 3418 236 111 90 chr2 9734276 9734656 -240953198 + Charlie7 DNA MER1_type 860 1231 -1381 2633 39 0 0 chr2 9734656 9734967 -240952887 + AluY SINE Alu 1 311 0 3418 236 111 90 chr2 9734967 9735609 -240952245 + Charlie7 DNA MER1_type 1231 1858 -754 2198 96 7 13 chr2 9735609 9735912 -240951942 - AluSx SINE Alu -11 301 1 3418 236 111 90 chr2 9735912 9736485 -240951369 + Charlie7 DNA MER1_type 1858 2512 -100 2067 114 0 13 chr2 9736485 9736804 -240951050 + AluSg SINE Alu 1 310 0 3418 236 111 90 chr2 9736804 9736838 -240951016 + Charlie7 DNA MER1_type 2512 2544 -68 2251 78 7 3 chr2 9736848 9737156 -240950698 + AluYb8 SINE Alu 2 310 -8 967 303 149 15 chr2 9737181 9737689 -240950165 + MLT1H1 LTR MaLR 26 555 0 649 139 18 96 chr2 9737787 9737820 -240950034 - L1MB3 LINE L1 -2 6181 6147 2232 97 0 3 chr2 9737820 9738119 -240949735 + AluSx SINE Alu 1 298 -14 359 21 21 0 chr2 9738123 9738171 -240949683 + (CA)n Simple_repeat Simple_repeat 2 50 0 649 139 18 96 chr2 9738171 9738298 -240949556 - L1MB3 LINE L1 -39 6144 6029 1050 84 0 14 chr2 9738301 9738444 -240949410 + AluSq/x SINE Alu 1 141 -171 2087 121 6 10 chr2 9738444 9738758 -240949096 + AluSq SINE Alu 1 313 0 963 170 37 54 chr2 9738758 9738970 -240948884 - L1MB3 LINE L1 -144 6039 5830 1823 137 9 44 chr2 9738970 9739139 -240948715 - AluSx SINE Alu -8 304 150 606 63 0 0 chr2 9739139 9739218 -240948636 + (TTTC)n Simple_repeat Simple_repeat 2 80 0 1823 137 9 44 chr2 9739218 9739363 -240948491 - AluSx SINE Alu -162 150 1 963 170 37 54 chr2 9739363 9739391 -240948463 - L1MB3 LINE L1 -353 5830 5803 2009 128 7 0 chr2 9739391 9739687 -240948167 + AluSx SINE Alu 1 298 -14 190 344 133 31 chr2 9739942 9740198 -240947656 + L2 LINE L2 2991 3272 0 185 338 39 13 chr2 9740323 9740400 -240947454 + MIR SINE MIR 32 110 -152 2015 188 114 53 chr2 9740526 9741015 -240946839 + MLT2B1 LTR ERVL 2 520 0 389 256 120 23 chr2 9742615 9742748 -240945106 - MLT1J LTR MaLR -219 292 147 3663 153 52 48 chr2 9744174 9744299 -240943555 + MER50 LTR ERV1 1 124 -610 2090 117 16 0 chr2 9744299 9744606 -240943248 + AluSx SINE Alu 1 312 0 3663 153 52 48 chr2 9744606 9745210 -240942644 + MER50 LTR ERV1 124 733 -1 264 77 0 0 chr2 9745276 9745315 -240942539 + (TC)n Simple_repeat Simple_repeat 1 39 0 693 170 67 0 chr2 9745522 9745657 -240942197 - MLT1C LTR MaLR 0 467 324 2148 98 10 3 chr2 9746636 9746933 -240940921 + AluSq SINE Alu 1 299 -14 1213 253 10 3 chr2 9746933 9747237 -240940617 + L1MB4 LINE L1 5598 5903 -277 1257 189 70 5 chr2 9747570 9747858 -240939996 + L1MB3 LINE L1 5833 6141 -42 2428 75 3 0 chr2 9747860 9748166 -240939688 + AluSp SINE Alu 1 307 -6 1202 237 48 0 chr2 9749263 9749575 -240938279 - L1MC3 LINE L1 0 7785 7459 182 282 0 0 chr2 9749576 9749615 -240938239 + L2 LINE L2 3139 3177 -95 742 258 32 53 chr2 9749982 9750265 -240937589 + MLT1C LTR MaLR 189 465 -2 462 270 88 7 chr2 9750276 9750424 -240937430 - L2 LINE L2 0 3313 3154 2075 128 0 0 chr2 9750432 9750736 -240937118 + AluSx SINE Alu 3 306 -6 237 222 32 63 chr2 9751504 9751567 -240936287 - L2 LINE L2 0 3272 3212 262 262 68 0 chr2 9752284 9752387 -240935467 - MIR SINE MIR -131 131 22 343 258 37 47 chr2 9753111 9753304 -240934550 - MIR SINE MIR -56 206 14 180 259 37 12 chr2 9753595 9753676 -240934178 + L2 LINE L2 2860 2942 -371 560 171 199 0 chr2 9753680 9753826 -240934028 + MER5A DNA MER1_type 1 175 -14 294 288 75 7 chr2 9753828 9753974 -240933880 + L2 LINE L2 2953 3108 -205 2175 109 3 7 chr2 9755861 9756165 -240931689 - AluSq SINE Alu -10 303 1 321 268 101 57 chr2 9756487 9756715 -240931139 - MER112 DNA MER1_type -6 254 17 996 75 0 0 chr2 9756723 9756857 -240930997 + AluSg/x SINE Alu 176 309 -3 2202 107 7 7 chr2 9756861 9757169 -240930685 + AluSc SINE Alu 2 309 0 2138 121 3 6 chr2 9757228 9757541 -240930313 + AluSx SINE Alu 1 312 0 512 244 71 56 chr2 9757706 9757903 -240929951 + L2 LINE L2 1381 1580 -1734 382 249 116 35 chr2 9757943 9758116 -240929738 + MER53 DNA DNA 3 189 0 * 1283 199 106 23 chr2 9758116 9758506 -240929348 + MLT1F LTR MaLR 104 542 0 719 264 147 15 chr2 9758516 9758842 -240929012 + L2 LINE L2 1590 1958 -1356 405 272 12 74 chr2 9758843 9759005 -240928849 - L2 LINE L2 -2 3311 3160 370 267 93 25 chr2 9759014 9759175 -240928679 + L1MC5 LINE L1 7730 7901 -60 608 292 51 4 chr2 9759275 9759544 -240928310 - L2 LINE L2 -298 3015 2726 1094 236 8 4 chr2 9759571 9759830 -240928024 + AluJo SINE Alu 21 280 -32 408 326 36 41 chr2 9759860 9760056 -240927798 + L2 LINE L2 2334 2528 -786 2473 100 0 0 chr2 9760564 9760875 -240926979 + AluSx SINE Alu 1 311 -1 605 274 54 0 chr2 9760889 9761057 -240926797 + L1PB4 LINE L1 5966 6142 -14 443 216 48 84 chr2 9761129 9761296 -240926558 + L1MC4a LINE L1 5764 5924 -1884 1706 92 0 0 chr2 9761439 9761656 -240926198 - AluY SINE Alu 0 311 95 617 41 0 0 chr2 9761656 9761729 -240926125 + AluY SINE Alu 27 99 -212 374 284 106 29 chr2 9762538 9762746 -240925108 - MIR SINE MIR -31 231 8 298 276 14 48 chr2 9763393 9763538 -240924316 + GA-rich Low_complexity Low_complexity 4 143 0 636 183 58 8 chr2 9763785 9763905 -240923949 - FLAM_A SINE Alu -8 134 9 1075 182 43 34 chr2 9764102 9764275 -240923579 - MER46A DNA MER2_type -2495 236 59 2027 152 139 16 chr2 9764275 9764656 -240923198 + MSTA LTR MaLR 1 428 0 1075 182 43 34 chr2 9764656 9764691 -240923163 - MER46A DNA MER2_type -2672 59 26 2365 89 0 0 chr2 9766387 9766680 -240921174 - AluSc SINE Alu -16 293 1 185 415 13 21 chr2 9766960 9767194 -240920660 + L2 LINE L2 2505 2736 -578 239 319 34 50 chr2 9767243 9767362 -240920492 + L2 LINE L2 3073 3189 -83 2345 98 0 0 chr2 9767554 9767851 -240920003 + AluY SINE Alu 1 297 -14 4132 173 40 12 chr2 9769244 9770066 -240917788 + L1MB7 LINE L1 5321 6165 -19 262 281 99 23 chr2 9772462 9772633 -240915221 - MIR SINE MIR -46 216 33 570 43 0 0 chr2 9772902 9772972 -240914882 + MER41B LTR ERV1 478 547 -88 252 250 31 0 chr2 9773528 9773592 -240914262 + C-rich Low_complexity Low_complexity 4 69 0 22 0 0 0 chr2 9774161 9774183 -240913671 + AT_rich Low_complexity Low_complexity 1 22 0 405 321 132 5 chr2 9774334 9774524 -240913330 + L1MB8 LINE L1 5448 5661 -2147 1678 153 29 4 chr2 9774733 9775014 -240912840 + AluJo SINE Alu 1 288 -24 243 261 87 33 chr2 9775478 9775570 -240912284 + L2 LINE L2 3158 3254 -18 190 381 137 6 chr2 9776522 9776837 -240911017 + L2 LINE L2 2127 2482 -832 284 329 0 12 chr2 9778323 9778408 -240909446 - L2 LINE L2 -9 3304 3221 2848 179 38 30 chr2 9778500 9778809 -240909045 + L1MB8 LINE L1 5509 5814 -364 2027 140 49 6 chr2 9778809 9779137 -240908717 + MER2 DNA MER2_type 2 343 -1 2848 179 38 30 chr2 9779137 9779459 -240908395 + L1MB8 LINE L1 5814 6145 -33 254 224 0 0 chr2 9779462 9779511 -240908343 + L1MB8 LINE L1 6097 6145 -33 251 224 0 0 chr2 9779514 9779563 -240908291 + L1MB8 LINE L1 6097 6145 -33 424 209 0 0 chr2 9779566 9779652 -240908202 + L1MB7 LINE L1 6099 6184 0 413 152 30 0 chr2 9779703 9779769 -240908085 + Tigger2 DNA MER2_type 2 69 -2649 * 1903 146 56 11 chr2 9779755 9780111 -240907743 + Tigger2 DNA MER2_type 2270 2641 -77 1137 120 0 0 chr2 9780232 9780465 -240907389 + (TA)n Simple_repeat Simple_repeat 1 233 0 2307 88 0 7 chr2 9780465 9780759 -240907095 - AluSc SINE Alu -17 292 1 380 209 0 0 chr2 9780759 9780826 -240907028 + Tigger2 DNA MER2_type 2651 2717 -1 1098 121 143 27 chr2 9781396 9781620 -240906234 - L1MB3 LINE L1 0 6183 5934 227 97 0 0 chr2 9781950 9781981 -240905873 + L1ME3 LINE L1 6124 6154 -8 1724 131 39 18 chr2 9783305 9783587 -240904267 - AluJo SINE Alu -15 297 10 216 218 0 0 chr2 9784778 9784869 -240902985 + GA-rich Low_complexity Low_complexity 1 91 0 1758 149 21 4 chr2 9784912 9785226 -240902628 + AluJb SINE Alu 1 312 0 22 56 0 0 chr2 9785831 9785867 -240901987 + AT_rich Low_complexity Low_complexity 1 36 0 2394 75 3 7 chr2 9786318 9786626 -240901228 - AluSg SINE Alu -3 307 1 618 255 57 0 chr2 9786678 9786835 -240901019 + HAL1 LINE L1 1 166 -2341 392 290 181 36 chr2 9787028 9787249 -240900605 + HAL1 LINE L1 599 851 -1656 574 249 90 37 chr2 9787371 9787560 -240900294 - HAL1 LINE L1 -761 1746 1548 1007 276 117 8 chr2 9787576 9787897 -240899957 + HAL1 LINE L1 1771 2142 -365 1626 164 31 31 chr2 9787897 9788190 -240899664 + AluJo SINE Alu 1 293 -19 1007 276 117 8 chr2 9788190 9788252 -240899602 + HAL1 LINE L1 2142 2196 -311 230 133 0 22 chr2 9788310 9788355 -240899499 + (GA)n Simple_repeat Simple_repeat 2 45 0 347 280 43 0 chr2 9788355 9788448 -240899406 + HAL1 LINE L1 2334 2430 -77 1567 131 85 4 chr2 9788505 9788764 -240899090 - AluJb SINE Alu -10 302 23 2072 122 0 0 chr2 9788772 9789080 -240898774 - AluSx SINE Alu 0 321 14 24 85 0 0 chr2 9789150 9789209 -240898645 + AT_rich Low_complexity Low_complexity 1 59 0 3589 109 40 32 chr2 9789378 9789901 -240897953 - MER1A DNA MER1_type 0 527 1 191 279 29 15 chr2 9790083 9790151 -240897703 + L2 LINE L2 3245 3313 0 872 163 6 25 chr2 9790162 9790322 -240897532 - FRAM SINE Alu -19 157 1 3143 230 86 32 chr2 9791209 9792214 -240895640 + Tigger6a DNA MER2_type 2 1060 -23 281 324 29 10 chr2 9792978 9793080 -240894774 - MIR3 SINE MIR -54 154 51 324 225 90 9 chr2 9793600 9793711 -240894143 + L1ME4a LINE L1 5735 5854 -267 319 297 74 20 chr2 9793792 9793940 -240893914 + L1ME4a LINE L1 5966 6121 0 2337 92 0 3 chr2 9794246 9794552 -240893302 - AluY SINE Alu -6 305 1 1703 162 18 7 chr2 9794726 9795004 -240892850 + AluJb SINE Alu 7 287 -25 409 196 322 19 chr2 9795153 9795539 -240892315 + LTR50 LTR ERVL 136 736 -59 2169 128 40 15 chr2 9797123 9797452 -240890402 - MER1B DNA MER1_type 0 337 1 752 159 46 26 chr2 9798023 9798174 -240889680 - MER103 DNA DNA -1 165 12 697 295 14 5 chr2 9798198 9798408 -240889446 - MIR SINE MIR -45 217 6 623 213 104 97 chr2 9799320 9799531 -240888323 + MIR SINE MIR 3 216 -46 1774 154 59 0 chr2 9799531 9799817 -240888037 + AluSx SINE Alu 1 303 -9 623 213 104 97 chr2 9799817 9799865 -240887989 + MIR SINE MIR 216 262 0 234 0 0 0 chr2 9800939 9800965 -240886889 + (TTA)n Simple_repeat Simple_repeat 2 27 0 505 200 0 0 chr2 9800965 9801045 -240886809 - FLAM SINE Alu -22 121 42 1220 151 5 15 chr2 9801164 9801370 -240886484 + L1MA8 LINE L1 6083 6286 -5 2242 75 0 42 chr2 9802494 9802801 -240885053 + AluY SINE Alu 1 294 -17 476 210 51 80 chr2 9803003 9803141 -240884713 + L2 LINE L2 3176 3309 -4 537 200 183 8 chr2 9804160 9804280 -240883574 - FLAM_A SINE Alu -1 141 1 1672 149 12 81 chr2 9804690 9804822 -240883032 + AluJo SINE Alu 1 140 -172 2212 107 3 22 chr2 9804822 9805139 -240882715 + AluSx SINE Alu 1 311 -1 1672 149 12 81 chr2 9805139 9805341 -240882513 + AluJo SINE Alu 140 312 0 2014 113 0 4 chr2 9805697 9805971 -240881883 - AluSx SINE Alu -18 294 22 868 162 125 97 chr2 9805997 9806213 -240881641 + AluJo SINE Alu 84 305 -7 210 150 0 0 chr2 9807061 9807101 -240880753 + (TAA)n Simple_repeat Simple_repeat 2 41 0 2221 115 0 0 chr2 9807153 9807448 -240880406 - AluSx SINE Alu -17 295 1 463 155 28 0 chr2 9807510 9807581 -240880273 - AluJ/FRAM SINE Alu -20 292 220 741 261 48 69 chr2 9807592 9807926 -240879928 - MER46C DNA MER2_type -11 327 1 258 260 55 0 chr2 9808758 9808831 -240879023 + HAL1 LINE L1 57 133 -2374 245 248 48 166 chr2 9809017 9809348 -240878506 + HAL1 LINE L1 424 715 -1792 2324 89 30 0 chr2 9809406 9809708 -240878146 - AluSx SINE Alu -1 311 1 2033 154 0 0 chr2 9809738 9810037 -240877817 - AluJb SINE Alu -13 299 1 380 277 236 54 chr2 9810109 9810499 -240877355 - L2 LINE L2 0 3313 2853 1217 223 65 60 chr2 9810523 9810890 -240876964 + L1M4 LINE L1 799 1167 -5375 * 1346 206 122 19 chr2 9810887 9811228 -240876626 + L1MB7 LINE L1 5725 6118 -66 930 140 0 22 chr2 9811228 9811364 -240876490 - FLAM_A SINE Alu 0 133 1 1346 206 122 19 chr2 9811364 9811439 -240876415 + L1MB7 LINE L1 6118 6184 0 339 257 53 82 chr2 9811455 9811661 -240876193 - L1MC4 LINE L1 -404 7638 7439 234 81 0 0 chr2 9812317 9812354 -240875500 + (TATG)n Simple_repeat Simple_repeat 1 37 0 1752 132 17 38 chr2 9812354 9812641 -240875213 - AluJo SINE Alu -31 281 1 1779 172 10 3 chr2 9813979 9814282 -240873572 - AluSx SINE Alu -7 305 1 1862 178 0 0 chr2 9814504 9814802 -240873052 + AluJo SINE Alu 5 302 -10 1027 173 32 5 chr2 9815103 9815288 -240872566 - MER3 DNA MER1_type 0 209 20 254 269 0 0 chr2 9815368 9815435 -240872419 + L1ME4a LINE L1 5753 5819 -1989 220 376 94 0 chr2 9816314 9816463 -240871391 + L2 LINE L2 2681 2843 -471 190 337 157 56 chr2 9816565 9816871 -240870983 + L2 LINE L2 2933 3269 -3 817 150 1 45 chr2 9816975 9817150 -240870704 + L1MC1 LINE L1 5398 5558 -615 * 829 206 36 10 chr2 9817149 9817343 -240870511 - HAL1 LINE L1 -651 1856 1658 1128 31 0 0 chr2 9817362 9817490 -240870364 - SVA Other Other 0 1386 1259 400 138 0 0 chr2 9817491 9817549 -240870305 + Alu SINE Alu 236 293 -19 235 298 85 59 chr2 9817555 9817860 -240869994 + HAL1 LINE L1 1860 2172 -335 4316 173 32 5 chr2 9817863 9818621 -240869233 + L1MC1 LINE L1 5544 6321 -12 1829 153 10 32 chr2 9819080 9819394 -240868460 + AluJo SINE Alu 1 307 -5 398 277 10 10 chr2 9819444 9819545 -240868309 - L2 LINE L2 -25 3288 3188 2261 75 0 7 chr2 9820597 9820917 -240866937 + AluY SINE Alu 16 311 0 907 136 40 40 chr2 9820929 9821105 -240866749 + L1PA16 LINE L1 5991 6166 0 21 0 0 0 chr2 9821105 9821126 -240866728 + AT_rich Low_complexity Low_complexity 1 21 0 856 201 69 0 chr2 9821981 9822170 -240865684 - MER105 DNA DNA 0 204 3 22 0 0 0 chr2 9822555 9822577 -240865277 + AT_rich Low_complexity Low_complexity 1 22 0 280 261 134 8 chr2 9822656 9822790 -240865064 + L1ME4a LINE L1 5969 6119 -2 992 202 5 11 chr2 9823089 9823277 -240864577 - AluJo SINE Alu -125 187 1 409 322 35 14 chr2 9823406 9823549 -240864305 - MIR SINE MIR -111 151 6 459 289 72 0 chr2 9823550 9823619 -240864235 + MIR3 SINE MIR 34 97 -111 2328 98 0 10 chr2 9823619 9823926 -240863928 + AluY SINE Alu 1 304 -7 459 289 72 0 chr2 9823926 9824008 -240863846 + MIR3 SINE MIR 97 196 -12 2088 80 8 0 chr2 9824906 9825169 -240862685 - AluSp SINE Alu -15 298 34 473 261 33 20 chr2 9825333 9825486 -240862368 - L2 LINE L2 0 3313 3159 881 176 14 0 chr2 9825491 9825639 -240862215 - MER58A DNA MER1_type -36 188 39 820 189 47 115 chr2 9825660 9825998 -240861856 + LTR37A LTR ERV1 40 354 -72 37 0 0 0 chr2 9826001 9826038 -240861816 + AT_rich Low_complexity Low_complexity 1 37 0 801 160 0 8 chr2 9826038 9826157 -240861697 - FLAM_C SINE Alu -15 118 1 318 244 0 0 chr2 9826157 9826239 -240861615 + LTR37A LTR ERV1 345 426 0 570 192 106 0 chr2 9826432 9826536 -240861318 - FLAM_A SINE Alu -20 122 8 32 86 0 0 chr2 9826578 9826659 -240861195 + AT_rich Low_complexity Low_complexity 1 81 0 344 250 0 0 chr2 9826902 9826966 -240860888 - L2 LINE L2 -548 2766 2703 204 40 0 0 chr2 9826978 9827003 -240860851 + (TG)n Simple_repeat Simple_repeat 2 26 0 27 39 0 19 chr2 9827003 9827027 -240860827 + AT_rich Low_complexity Low_complexity 1 24 -27 1879 159 0 10 chr2 9827027 9827316 -240860538 - AluJo SINE Alu -26 286 1 27 39 0 19 chr2 9827316 9827343 -240860511 + AT_rich Low_complexity Low_complexity 24 51 0 1348 268 101 87 chr2 9827344 9828088 -240859766 - L2 LINE L2 -619 2695 1942 1647 152 77 46 chr2 9828158 9828507 -240859347 - MER46B DNA MER2_type 0 236 2 222 283 9 142 chr2 9828854 9828960 -240858894 + L2 LINE L2 3144 3235 -37 1793 147 24 10 chr2 9829083 9829376 -240858478 - AluSx SINE Alu -15 297 1 1666 144 0 118 chr2 9829476 9829815 -240858039 + AluJo SINE Alu 1 299 -3 1931 153 44 0 chr2 9830108 9830402 -240857452 + AluSx SINE Alu 1 307 -5 1740 164 3 14 chr2 9831188 9831474 -240856380 + AluJo SINE Alu 1 283 -29 495 87 0 0 chr2 9831482 9831551 -240856303 + (CGTAA)n Simple_repeat Simple_repeat 3 71 0 2302 100 0 10 chr2 9831672 9831981 -240855873 - AluSg SINE Alu -4 306 1 2269 126 0 0 chr2 9831981 9832291 -240855563 - AluSx SINE Alu -2 310 1 2281 79 0 0 chr2 9832329 9832609 -240855245 + AluY SINE Alu 1 280 -31 207 0 0 0 chr2 9833029 9833052 -240854802 + (TAAAAA)n Simple_repeat Simple_repeat 2 24 0 987 89 8 0 chr2 9834104 9834227 -240853627 + AluSq/x SINE Alu 14 137 -175 2119 87 15 84 chr2 9834227 9834559 -240853295 + AluSq SINE Alu 1 309 -4 245 324 65 0 chr2 9834802 9834910 -240852944 + L2 LINE L2 2383 2497 -817 234 330 175 19 chr2 9835547 9835753 -240852101 + L2 LINE L2 2593 2830 -484 1911 142 13 7 chr2 9837156 9837458 -240850396 + AluSx SINE Alu 1 304 -8 314 299 110 13 chr2 9838261 9838415 -240849439 - MIR SINE MIR -47 215 47 2331 74 14 3 chr2 9838721 9839017 -240848837 - AluY SINE Alu -12 299 1 339 25 0 0 chr2 9839117 9839157 -240848697 + (CA)n Simple_repeat Simple_repeat 2 41 0 603 171 314 44 chr2 9840518 9840770 -240847084 + MER5C DNA MER1_type 5 324 0 219 280 0 54 chr2 9841145 9841238 -240846616 - MER5B DNA MER1_type -76 102 15 180 292 21 62 chr2 9841152 9841248 -240846606 + MER5A DNA MER1_type 94 185 -4 * 487 261 32 37 chr2 9841949 9842137 -240845717 + L1MC4 LINE L1 7492 7678 -364 263 345 12 30 chr2 9842332 9842500 -240845354 + L1MC4 LINE L1 7860 8024 -18 2389 97 3 0 chr2 9842500 9842808 -240845046 - AluSx SINE Alu -3 309 1 1491 201 18 41 chr2 9842874 9843217 -240844637 - MER58B DNA MER1_type 0 341 7 1466 169 27 37 chr2 9843358 9843654 -240844200 - AluJo SINE Alu -19 293 1 924 182 25 0 chr2 9843801 9843960 -240843894 + FRAM SINE Alu 1 162 -14 1203 170 166 0 chr2 9844538 9844815 -240843039 - MER33 DNA MER1_type 0 324 2 2513 68 0 0 chr2 9845148 9845456 -240842398 + AluSg SINE Alu 1 308 -2 279 320 0 40 chr2 9845461 9845561 -240842293 + MIR SINE MIR 20 115 -147 204 158 0 0 chr2 9845575 9845613 -240842241 + A-rich Low_complexity Low_complexity 1 38 0 2194 118 3 0 chr2 9846102 9846399 -240841455 + AluSx SINE Alu 1 298 -14 190 394 20 10 chr2 9846400 9846499 -240841355 - MER5A DNA MER1_type -54 135 36 283 192 39 0 chr2 9847918 9847970 -240839884 - MIR SINE MIR -63 145 92 1950 140 13 3 chr2 9848116 9848423 -240839431 + AluSx SINE Alu 1 310 -2 342 88 99 11 chr2 9848423 9848514 -240839340 + GA-rich Low_complexity Low_complexity 2 100 0 2057 117 14 0 chr2 9850225 9850515 -240837339 + AluSx SINE Alu 1 294 -18 251 185 56 0 chr2 9851351 9851405 -240836449 - L2 LINE L2 -1 3312 3256 * 323 304 20 10 chr2 9851402 9851504 -240836350 - L2 LINE L2 -3172 142 40 277 289 109 45 chr2 9851772 9851928 -240835926 + MER103 DNA DNA 1 166 0 1047 148 0 6 chr2 9851984 9852146 -240835708 + AluJo SINE Alu 1 161 -151 1601 162 3 56 chr2 9852583 9852886 -240834968 + AluJb SINE Alu 1 287 -25 2033 123 3 7 chr2 9853514 9853806 -240834048 - AluSx SINE Alu -21 291 1 202 270 0 0 chr2 9854099 9854173 -240833681 + A-rich Low_complexity Low_complexity 1 74 0 2297 106 3 0 chr2 9854262 9854563 -240833291 - AluSp SINE Alu -11 302 1 2175 116 3 0 chr2 9854565 9854859 -240832995 - AluSx SINE Alu -17 295 1 28 0 0 0 chr2 9855053 9855081 -240832773 + AT_rich Low_complexity Low_complexity 1 28 0 522 220 61 8 chr2 9855327 9855459 -240832395 + MIR SINE MIR 124 262 0 430 245 19 0 chr2 9855601 9855707 -240832147 + L1ME4a LINE L1 5562 5669 -452 2205 118 3 3 chr2 9856273 9856570 -240831284 + AluSx SINE Alu 1 297 -15 404 247 0 0 chr2 9856631 9856724 -240831130 + L1MC4 LINE L1 7805 7897 -145 2442 56 3 7 chr2 9856857 9857161 -240830693 + AluY SINE Alu 1 303 -8 1018 130 18 18 chr2 9857161 9857330 -240830524 + AluSg/x SINE Alu 132 300 -10 1927 92 78 0 chr2 9857337 9857608 -240830246 + AluSq SINE Alu 1 292 -21 1422 184 25 0 chr2 9857745 9858023 -240829831 - AluJo SINE Alu -27 285 1 185 267 0 67 chr2 9858706 9858781 -240829073 + L2 LINE L2 825 894 -2420 2363 137 9 0 chr2 9859078 9859428 -240828426 - L1PA16 LINE L1 -10 6156 5804 250 147 120 13 chr2 9859461 9859536 -240828318 + L1ME4a LINE L1 5732 5814 -1994 1939 104 85 0 chr2 9859542 9859812 -240828042 - AluSx SINE Alu -19 293 1 438 246 77 8 chr2 9860861 9860991 -240826863 + MIR SINE MIR 112 250 -12 23 0 0 0 chr2 9861015 9861038 -240826816 + AT_rich Low_complexity Low_complexity 1 23 0 618 250 85 0 chr2 9861175 9861339 -240826515 + MIR SINE MIR 57 234 -28 30 0 0 0 chr2 9861966 9861996 -240825858 + AT_rich Low_complexity Low_complexity 1 30 0 442 192 178 14 chr2 9862174 9862268 -240825586 + L1ME4a LINE L1 5930 6007 -114 1367 171 65 52 chr2 9862268 9862577 -240825277 - AluSq SINE Alu 0 313 1 442 192 178 14 chr2 9862577 9862628 -240825226 + L1ME4a LINE L1 6007 6099 -22 188 100 25 0 chr2 9862630 9862670 -240825184 + (TA)n Simple_repeat Simple_repeat 2 42 0 468 77 0 0 chr2 9862670 9862735 -240825119 + (CA)n Simple_repeat Simple_repeat 2 66 0 2263 85 0 4 chr2 9862799 9863118 -240824736 + AluSc SINE Alu 1 318 0 831 176 0 0 chr2 9863119 9863244 -240824610 + FLAM_C SINE Alu 1 125 -8 220 51 26 26 chr2 9863624 9863641 -240824213 + (CAAAA)n Simple_repeat Simple_repeat 2 18 -22 2259 118 0 6 chr2 9863641 9863955 -240823899 + AluSx SINE Alu 1 312 0 220 51 26 26 chr2 9863955 9863976 -240823878 + (CAAAA)n Simple_repeat Simple_repeat 17 40 0 201 74 0 0 chr2 9864588 9864615 -240823239 + (T)n Simple_repeat Simple_repeat 1 27 0 2306 106 3 3 chr2 9865234 9865546 -240822308 + AluSp SINE Alu 1 312 -1 1919 164 0 3 chr2 9865899 9866192 -240821662 + AluSx SINE Alu 1 292 -20 1120 165 0 35 chr2 9867238 9867438 -240820416 + AluJb SINE Alu 120 312 0 1126 180 77 77 chr2 9867578 9867746 -240820108 + MLT1E2 LTR MaLR 10 176 -450 2185 109 3 0 chr2 9867746 9868052 -240819802 + AluSg SINE Alu 1 307 0 1126 180 77 77 chr2 9868052 9868110 -240819744 + MLT1E2 LTR MaLR 176 232 -394 1768 181 19 10 chr2 9868110 9868419 -240819435 + AluJo SINE Alu 1 312 0 1126 180 77 77 chr2 9868419 9868619 -240819235 + MLT1E2 LTR MaLR 232 436 -190 562 224 131 27 chr2 9868715 9868898 -240818956 + MLT1E2 LTR MaLR 422 623 -3 525 283 107 29 chr2 9869277 9869736 -240818118 + L1MC4a LINE L1 5394 5817 -304 2366 112 0 0 chr2 9869821 9870126 -240817728 - AluSx SINE Alu -7 305 1 2170 130 0 0 chr2 9870128 9870427 -240817427 - AluSx SINE Alu -13 299 1 2041 145 0 19 chr2 9870643 9870961 -240816893 - AluJb SINE Alu 0 312 1 279 0 0 0 chr2 9871028 9871059 -240816795 + (TG)n Simple_repeat Simple_repeat 2 32 0 198 323 96 55 chr2 9872297 9872517 -240815337 + MIR SINE MIR 22 250 -12 970 195 59 0 chr2 9872521 9872742 -240815112 + MSTB LTR MaLR 1 234 -192 467 144 103 10 chr2 9872962 9873059 -240814795 - MER5A DNA MER1_type -83 106 1 363 272 57 7 chr2 9873434 9873595 -240814259 + MIR SINE MIR 14 184 -62 293 296 82 41 chr2 9874774 9874970 -240812884 + L2 LINE L2 2997 3200 -72 261 98 0 0 chr2 9874998 9875039 -240812815 + (TGAA)n Simple_repeat Simple_repeat 4 44 0 579 246 24 12 chr2 9875110 9875277 -240812577 - MER20 DNA MER1_type -15 204 36 27 29 0 0 chr2 9875663 9875697 -240812157 + AT_rich Low_complexity Low_complexity 1 34 0 379 238 0 10 chr2 9875725 9875826 -240812028 - FLAM_C SINE Alu -7 126 27 1933 108 17 21 chr2 9876001 9876289 -240811565 - AluSg SINE Alu -23 287 1 1071 84 7 14 chr2 9876289 9876431 -240811423 - AluSq/x SINE Alu -172 141 1 652 139 18 96 chr2 9876434 9876561 -240811293 + L1MB3 LINE L1 6029 6164 -19 359 21 21 0 chr2 9876561 9876609 -240811245 + (TG)n Simple_repeat Simple_repeat 2 50 0 2213 101 10 7 chr2 9876613 9876910 -240810944 - AluSx SINE Alu -14 298 1 652 139 18 96 chr2 9876910 9876943 -240810911 + L1MB3 LINE L1 6167 6181 -2 612 237 40 48 chr2 9877042 9877291 -240810563 - MLT1H1 LTR MaLR 0 555 309 395 310 96 13 chr2 9877320 9877550 -240810304 - MLT1H1 LTR MaLR -319 276 33 1721 126 13 32 chr2 9877582 9877891 -240809963 - AluY SINE Alu -8 303 1 625 149 17 74 chr2 9878310 9878485 -240809369 + AluJb SINE Alu 131 295 -17 368 209 6 122 chr2 9878532 9878704 -240809150 + Charlie7 DNA MER1_type 317 468 -2144 1859 250 67 46 chr2 9878721 9879437 -240808417 + MER21B LTR ERV1 22 752 -111 329 289 30 68 chr2 9879474 9879737 -240808117 + Charlie7 DNA MER1_type 527 779 -1833 237 118 29 73 chr2 9880359 9880427 -240807427 - FLAM SINE Alu -25 108 44 238 254 63 0 chr2 9880937 9881000 -240806854 - MIR3 SINE MIR -30 178 112 2004 127 28 3 chr2 9881289 9881580 -240806274 + AluSx SINE Alu 1 298 -14 2449 80 3 10 chr2 9881585 9881896 -240805958 + AluSq SINE Alu 5 313 0 1869 120 6 70 chr2 9882443 9882759 -240805095 - AluJb SINE Alu -16 296 1 2469 50 6 44 chr2 9883048 9883368 -240804486 + AluY SINE Alu 1 308 -3 2176 112 7 0 chr2 9883379 9883673 -240804181 + AluY SINE Alu 1 296 -15 1470 254 81 5 chr2 9883728 9884149 -240803705 + MLT1J LTR MaLR 1 453 -58 225 239 28 113 chr2 9884225 9884367 -240803487 - MIR SINE MIR -11 251 122 358 252 47 19 chr2 9885018 9885125 -240802729 + L3 LINE CR1 1377 1486 -91 628 241 171 0 chr2 9885968 9886155 -240801699 + MIR SINE MIR 44 262 0 340 243 72 36 chr2 9889163 9889274 -240798580 + MIR SINE MIR 65 179 -83 2096 112 14 0 chr2 9889500 9889795 -240798059 + AluSg SINE Alu 1 299 -11 2337 98 0 7 chr2 9890417 9890723 -240797131 + AluSq SINE Alu 1 304 -9 839 169 0 8 chr2 9891134 9891264 -240796590 + FLAM_C SINE Alu 1 129 -14 262 67 44 0 chr2 9891370 9891415 -240796439 + GA-rich Low_complexity Low_complexity 1 47 0 470 149 44 70 chr2 9891417 9891450 -240796404 + MER3 DNA MER1_type 98 130 -79 1123 175 171 52 chr2 9891450 9891585 -240796269 - AluJo SINE Alu 0 302 184 2391 100 3 0 chr2 9891585 9891885 -240795969 - AluSp SINE Alu -12 301 1 1123 175 171 52 chr2 9891885 9892018 -240795836 - AluJo SINE Alu -118 184 2 470 149 44 70 chr2 9892018 9892098 -240795756 + MER3 DNA MER1_type 130 208 -1 244 229 0 0 chr2 9892058 9892106 -240795748 - MER3 DNA MER1_type -121 88 41 * 1818 165 7 11 chr2 9892618 9892903 -240794951 + AluJo SINE Alu 8 291 -21 180 0 0 0 chr2 9892981 9893001 -240794853 + (TG)n Simple_repeat Simple_repeat 1 20 0 582 290 67 40 chr2 9893519 9893743 -240794111 + MIR SINE MIR 13 242 -20 250 203 195 0 chr2 9894030 9894148 -240793706 + L1ME LINE L1 5711 5851 -270 337 239 159 11 chr2 9894154 9894242 -240793612 + AluSg SINE Alu 24 124 -176 2293 104 0 0 chr2 9894276 9894574 -240793280 - AluSx SINE Alu -14 298 1 1275 148 0 5 chr2 9894719 9894915 -240792939 - AluJb SINE Alu -1 311 117 284 127 0 0 chr2 9894927 9894982 -240792872 - Alu SINE Alu -1 300 246 1789 123 0 4 chr2 9894989 9895241 -240792613 + AluSx SINE Alu 62 312 0 768 193 7 7 chr2 9895992 9896137 -240791717 + MER45A DNA AcHobo 34 178 0 375 375 106 27 chr2 9896230 9896606 -240791248 - L2 LINE L2 -458 2856 2451 1401 242 35 33 chr2 9896717 9896897 -240790957 + L1M4 LINE L1 4521 4699 -1447 2390 93 0 3 chr2 9896897 9897208 -240790646 + AluSx SINE Alu 1 310 -2 1401 242 35 33 chr2 9897208 9897510 -240790344 + L1M4 LINE L1 4699 5004 -1142 1226 153 5 63 chr2 9897510 9897732 -240790122 + AluSx SINE Alu 1 209 -103 2090 119 10 26 chr2 9897832 9898143 -240789711 + AluSq SINE Alu 1 306 -7 1630 184 7 7 chr2 9898153 9898431 -240789423 + AluJo SINE Alu 23 300 -12 993 250 12 19 chr2 9898439 9898537 -240789317 + L1MC4a LINE L1 6513 6610 -1198 186 43 0 0 chr2 9898537 9898560 -240789294 + (GA)n Simple_repeat Simple_repeat 2 24 0 993 250 12 19 chr2 9898560 9898717 -240789137 + L1MC4a LINE L1 6610 6766 -1042 318 145 0 105 chr2 9898886 9898944 -240788910 + L1MC4 LINE L1 7975 8025 -17 2142 151 0 3 chr2 9898944 9899256 -240788598 + AluJb SINE Alu 1 311 -1 318 145 0 105 chr2 9899256 9899273 -240788581 + L1MC4 LINE L1 8025 8042 0 600 254 159 6 chr2 9899391 9899718 -240788136 + L2 LINE L2 143 519 -2795 624 206 84 0 chr2 9899760 9899918 -240787936 + MER3 DNA MER1_type 1 123 -86 1861 167 17 3 chr2 9899935 9900234 -240787620 - AluJb SINE Alu -9 303 1 938 178 0 30 chr2 9900245 9900414 -240787440 - AluJb SINE Alu -25 287 124 1525 184 3 63 chr2 9900577 9900911 -240786943 - AluJo SINE Alu 0 312 1 235 30 0 0 chr2 9900913 9900946 -240786908 - L1PA12 LINE L1 -2 6166 6134 829 152 0 15 chr2 9900946 9901078 -240786776 + FLAM_C SINE Alu 1 130 -3 186 259 56 19 chr2 9901095 9901149 -240786705 - L3 LINE CR1 -1194 383 328 2020 146 13 0 chr2 9901311 9901612 -240786242 - AluJb SINE Alu -7 305 1 1917 155 14 0 chr2 9902055 9902346 -240785508 + AluJb SINE Alu 1 295 -17 2417 84 3 3 chr2 9902351 9902650 -240785204 + AluSp SINE Alu 1 299 -14 2138 143 0 0 chr2 9902888 9903181 -240784673 + AluSx SINE Alu 1 293 -19 1753 161 7 4 chr2 9903450 9903730 -240784124 - AluJb SINE Alu -31 281 1 368 289 48 54 chr2 9903730 9903896 -240783958 + L1ME4a LINE L1 5912 6076 -45 1565 124 5 0 chr2 9903897 9904107 -240783747 + AluSx SINE Alu 58 268 -44 2491 78 7 0 chr2 9904218 9904524 -240783330 + AluSc SINE Alu 1 308 -1 181 243 216 27 chr2 9905960 9906034 -240781820 + L2 LINE L2 3185 3272 0 296 316 74 26 chr2 9906041 9906231 -240781623 - MIR3 SINE MIR -7 201 3 1235 179 0 5 chr2 9906415 9906627 -240781227 + AluJb SINE Alu 87 297 -15 418 154 39 62 chr2 9906630 9906707 -240781147 + Charlie5 DNA MER1_type 2494 2568 -56 2132 119 0 10 chr2 9906707 9907000 -240780854 - AluSx SINE Alu -22 290 1 418 154 39 62 chr2 9907000 9907052 -240780802 + Charlie5 DNA MER1_type 2568 2620 -4 1668 139 56 40 chr2 9907113 9907416 -240780438 - AluJo SINE Alu -4 308 1 207 228 254 18 chr2 9907418 9907532 -240780322 + MER5A DNA MER1_type 47 187 -2 * 511 208 10 0 chr2 9907440 9907536 -240780318 - MER5A DNA MER1_type -80 109 13 963 213 11 0 chr2 9907566 9907749 -240780105 - MER5A DNA MER1_type -4 185 1 753 272 117 29 chr2 9908011 9908353 -240779501 - L1M4 LINE L1 -2882 3264 2893 1328 171 0 9 chr2 9908356 9908567 -240779287 - AluJo SINE Alu -94 218 10 208 130 0 65 chr2 9908597 9908643 -240779211 + (TTTTTG)n Simple_repeat Simple_repeat 5 47 0 582 100 12 0 chr2 9908661 9908741 -240779113 + AluJ/FLAM SINE Alu 2 82 -230 1057 138 66 0 chr2 9908848 9909029 -240778825 + AluY SINE Alu 119 311 0 356 333 53 15 chr2 9909043 9909175 -240778679 - L1M4 LINE L1 -3372 2774 2638 2039 130 10 13 chr2 9909270 9909571 -240778283 - AluSx SINE Alu -12 300 1 186 354 80 18 chr2 9909705 9909818 -240778036 - MIR SINE MIR -71 137 18 496 268 89 94 chr2 9910262 9910636 -240777218 + L2 LINE L2 2312 2684 -630 1867 74 0 4 chr2 9910636 9910889 -240776965 + AluSp SINE Alu 57 308 0 496 268 89 94 chr2 9910889 9911140 -240776714 + L2 LINE L2 2684 2935 -379 2136 105 48 7 chr2 9911398 9911693 -240776161 + AluSx SINE Alu 1 307 -5 278 273 11 11 chr2 9911698 9911786 -240776068 - L1ME LINE L1 -476 5645 5558 267 242 11 21 chr2 9911856 9911951 -240775903 - L1ME LINE L1 -2379 5429 5336 2336 97 0 3 chr2 9912267 9912567 -240775287 - AluSx SINE Alu -13 299 1 200 189 38 19 chr2 9913264 9913317 -240774537 + MIR SINE MIR 85 138 -124 447 68 0 0 chr2 9913453 9913512 -240774342 + (TTCC)n Simple_repeat Simple_repeat 1 59 0 2037 118 4 0 chr2 9913512 9913784 -240774070 - AluSx SINE Alu -33 279 7 727 175 241 0 chr2 9914703 9914836 -240773018 - AluJo SINE Alu -18 294 194 195 69 0 0 chr2 9914836 9914865 -240772989 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 727 175 241 0 chr2 9914865 9914897 -240772957 - AluJo SINE Alu -118 194 89 1970 121 0 48 chr2 9915066 9915380 -240772474 + AluSg SINE Alu 1 299 -11 2253 113 17 0 chr2 9915383 9915683 -240772171 + AluSp SINE Alu 1 305 -8 1159 124 12 0 chr2 9915687 9915856 -240771998 + FRAM SINE Alu 1 170 -6 1200 204 98 14 chr2 9915857 9916284 -240771570 + L1ME3A LINE L1 5200 5667 -503 2380 110 0 0 chr2 9916287 9916595 -240771259 + AluSg SINE Alu 1 308 -2 816 164 8 8 chr2 9916635 9916763 -240771091 + FAM SINE Alu 6 133 -52 28 0 0 0 chr2 9916767 9916795 -240771059 + AT_rich Low_complexity Low_complexity 1 28 0 2203 126 7 3 chr2 9916806 9917116 -240770738 + AluSp SINE Alu 3 313 0 685 245 137 90 chr2 9917118 9917587 -240770267 + L1ME3A LINE L1 5652 6142 -28 2270 115 0 0 chr2 9917620 9917915 -240769939 - AluSq SINE Alu -18 295 1 1512 155 73 43 chr2 9917915 9918233 -240769621 - L1MC1 LINE L1 -8 6325 5995 2065 97 0 0 chr2 9918253 9918532 -240769322 - AluSx SINE Alu 0 301 23 219 319 43 77 chr2 9919108 9919230 -240768624 + L2 LINE L2 2891 3016 -297 2302 122 0 0 chr2 9919230 9919534 -240768320 + AluSq SINE Alu 1 304 -9 219 319 43 77 chr2 9919534 9919616 -240768238 + L2 LINE L2 3016 3099 -214 641 165 55 16 chr2 9919616 9919743 -240768111 - FLAM_C SINE Alu -1 132 1 219 319 43 77 chr2 9919743 9919913 -240767941 + L2 LINE L2 3099 3253 -60 1245 176 173 4 chr2 9920310 9920565 -240767289 + AluSx SINE Alu 1 298 -14 185 94 31 0 chr2 9921027 9921059 -240766795 + (TTCA)n Simple_repeat Simple_repeat 2 34 0 2349 96 3 10 chr2 9922050 9922364 -240765490 + AluSx SINE Alu 1 312 0 2087 104 8 0 chr2 9922724 9922992 -240764862 + AluSx SINE Alu 22 291 -21 988 102 0 0 chr2 9923008 9923163 -240764691 + AluSg/x SINE Alu 157 311 0 379 257 95 0 chr2 9923244 9923349 -240764505 + MIR SINE MIR 32 146 -62 259 366 0 0 chr2 9923881 9923974 -240763880 - MIR SINE MIR -73 189 97 395 300 147 21 chr2 9925001 9925191 -240762663 + L1ME4a LINE L1 5880 6093 -28 2113 150 0 10 chr2 9925461 9925639 -240762215 - AluSx SINE Alu -1 311 136 2614 43 0 3 chr2 9925639 9925938 -240761916 - AluY SINE Alu -13 298 1 2113 150 0 10 chr2 9925938 9926073 -240761781 - AluSx SINE Alu -176 136 1 240 59 0 0 chr2 9926151 9926185 -240761669 + (GTTTG)n Simple_repeat Simple_repeat 5 38 0 2276 95 14 0 chr2 9926186 9926482 -240761372 - AluSp SINE Alu -12 301 2 367 285 39 31 chr2 9926683 9926813 -240761041 + MIR3 SINE MIR 15 145 -63 28 79 0 0 chr2 9928196 9928259 -240759595 + GC_rich Low_complexity Low_complexity 1 63 0 2548 59 3 3 chr2 9930089 9930392 -240757462 + AluY SINE Alu 1 303 -8 1497 77 0 0 chr2 9930413 9930594 -240757260 - AluSx SINE Alu -131 181 1 700 139 0 9 chr2 9931157 9931265 -240756589 + AluSq/x SINE Alu 27 133 -179 2194 103 7 3 chr2 9931269 9931569 -240756285 + AluSp SINE Alu 1 301 -12 568 204 10 0 chr2 9932403 9932506 -240755348 + FLAM_A SINE Alu 2 105 -37 309 109 0 0 chr2 9932506 9932552 -240755302 + (TCCC)n Simple_repeat Simple_repeat 1 46 0 2067 135 0 3 chr2 9932552 9932841 -240755013 - AluSx SINE Alu -24 288 1 1114 196 0 20 chr2 9932844 9933043 -240754811 + AluJo SINE Alu 105 299 -13 1619 117 0 22 chr2 9933087 9933317 -240754537 + AluSq SINE Alu 1 225 -88 494 189 42 0 chr2 9933417 9933512 -240754342 + AluSg/x SINE Alu 209 307 -3 476 61 122 0 chr2 9933517 9933615 -240754239 + GA-rich Low_complexity Low_complexity 4 113 0 243 279 177 0 chr2 9933696 9933775 -240754079 + MIR SINE MIR 58 150 -112 2069 229 49 20 chr2 9934197 9934805 -240753049 + L1ME2 LINE L1 5519 6144 -20 262 268 17 82 chr2 9934863 9935094 -240752760 + L1MC4 LINE L1 7826 8041 -1 2055 143 3 3 chr2 9935610 9935910 -240751944 - AluJb SINE Alu -12 300 1 2179 118 7 0 chr2 9936006 9936293 -240751561 - AluSg SINE Alu -21 289 1 1598 225 80 19 chr2 9936717 9937144 -240750710 + LTR40c LTR ERVL 1 453 -12 2381 75 20 10 chr2 9937207 9937502 -240750352 + AluSp SINE Alu 1 298 -15 792 189 0 0 chr2 9937510 9937642 -240750212 + FLAM_C SINE Alu 2 133 0 713 247 11 29 chr2 9938037 9938211 -240749643 - FRAM SINE Alu -7 169 1 1701 93 97 69 chr2 9938449 9938738 -240749116 + AluSg SINE Alu 1 297 -13 2178 253 127 45 chr2 9938909 9939002 -240748852 - L2 LINE L2 -4 3309 3225 1539 168 54 27 chr2 9939002 9939300 -240748554 + AluJb SINE Alu 1 306 -6 2178 253 127 45 chr2 9939300 9940269 -240747585 - L2 LINE L2 -88 3225 2164 287 315 130 0 chr2 9940276 9940384 -240747470 + L3 LINE CR1 989 1110 -467 1410 296 124 42 chr2 9940420 9940887 -240746967 + L2 LINE L2 1835 2262 -1051 1788 93 42 0 chr2 9940887 9941124 -240746730 + AluSc SINE Alu 1 247 -62 1410 296 124 42 chr2 9941124 9942012 -240745842 + L2 LINE L2 2262 3312 -1 496 299 132 37 chr2 9941999 9942324 -240745530 + L3 LINE CR1 1133 1488 -89 * 185 274 0 39 chr2 9942344 9942395 -240745459 + MIR SINE MIR 78 126 -82 255 339 156 0 chr2 9942527 9942636 -240745218 + L2 LINE L2 3177 3302 -11 2533 65 0 7 chr2 9943342 9943651 -240744203 + AluSx SINE Alu 1 307 -5 2502 81 0 0 chr2 9943864 9944171 -240743683 + AluSx SINE Alu 1 307 -5 181 255 20 20 chr2 9944540 9944591 -240743263 + L2 LINE L2 3248 3298 -15 1673 187 26 10 chr2 9944752 9945057 -240742797 + 7SLRNA srpRNA srpRNA 5 314 -6 945 226 88 9 chr2 9945057 9945274 -240742580 + MIR SINE MIR 22 255 -7 908 136 97 24 chr2 9945343 9945549 -240742305 - L1MB8 LINE L1 -1 6177 5957 825 205 58 0 chr2 9945578 9945734 -240742120 - AluJo SINE Alu -39 273 109 930 157 0 7 chr2 9945736 9945883 -240741971 - MER46A DNA MER2_type -90 146 1 384 115 4 4 chr2 9945885 9945941 -240741913 - MLT1A1 LTR MaLR -216 158 99 2377 97 0 3 chr2 9945941 9946251 -240741603 + AluSg SINE Alu 1 309 -1 2233 125 0 0 chr2 9946259 9946556 -240741298 + AluSq SINE Alu 1 297 -16 2135 105 0 74 chr2 9946556 9946880 -240740974 + AluSc SINE Alu 1 300 -9 300 259 56 37 chr2 9946975 9947083 -240740771 + MIR SINE MIR 151 260 -2 1516 168 7 45 chr2 9947376 9947504 -240740350 + AluJo SINE Alu 13 144 -168 2228 102 13 7 chr2 9947504 9947834 -240740020 + AluSq SINE Alu 1 332 0 1516 168 7 45 chr2 9947834 9947995 -240739859 + AluJo SINE Alu 144 293 -19 327 103 17 35 chr2 9947995 9948053 -240739801 + U7 snRNA snRNA 7 63 0 235 307 11 23 chr2 9948064 9948152 -240739702 - L1ME LINE L1 -527 5594 5508 2529 77 0 6 chr2 9948461 9948772 -240739082 - AluSc SINE Alu 0 309 1 2199 108 30 7 chr2 9948836 9949141 -240738713 - AluSq SINE Alu -1 312 1 1980 180 33 19 chr2 9949147 9949162 -240738692 - L1MB3 LINE L1 -37 6146 6133 2057 110 50 0 chr2 9949162 9949444 -240738410 - AluSx SINE Alu -16 296 1 1980 180 33 19 chr2 9949444 9949851 -240738003 - L1MB3 LINE L1 -50 6133 5718 1722 121 0 0 chr2 9949879 9950103 -240737751 - AluSx SINE Alu -88 224 1 2090 139 3 3 chr2 9950130 9950513 -240737341 - AluSc SINE Alu 0 383 1 1596 241 53 80 chr2 9950731 9950790 -240737064 - L1MC4 LINE L1 -2 8040 7981 2339 113 3 0 chr2 9950790 9951100 -240736754 + AluSp SINE Alu 1 311 -2 1596 241 53 80 chr2 9951100 9951382 -240736472 - L1MC4 LINE L1 -61 7981 7693 771 187 0 22 chr2 9951382 9951516 -240736338 + FLAM_A SINE Alu 1 131 -2 1596 241 53 80 chr2 9951516 9951653 -240736201 - L1MC4 LINE L1 -349 7693 7554 1859 124 3 107 chr2 9951653 9951999 -240735855 - AluY SINE Alu -1 310 1 1596 241 53 80 chr2 9951999 9952232 -240735622 - L1MC4 LINE L1 -488 7554 7346 392 159 62 53 chr2 9952242 9952355 -240735499 - L1ME2 LINE L1 0 6164 6051 191 347 92 10 chr2 9952514 9952612 -240735242 + MIR SINE MIR 45 150 -58 2303 111 3 3 chr2 9952651 9952957 -240734897 + AluSq SINE Alu 1 306 -7 25 51 0 0 chr2 9952975 9953014 -240734840 + AT_rich Low_complexity Low_complexity 1 39 0 880 156 0 0 chr2 9953016 9953144 -240734710 + FLAM_C SINE Alu 1 128 -5 816 248 64 67 chr2 9953164 9953507 -240734347 + L1ME4a LINE L1 5311 5652 -469 396 316 158 34 chr2 9953576 9953842 -240734012 + L1ME4a LINE L1 5634 5906 -215 2104 141 3 0 chr2 9954044 9954349 -240733505 + AluJb SINE Alu 7 312 0 345 218 64 0 chr2 9954462 9954540 -240733314 - L2 LINE L2 0 3272 3190 304 253 181 0 chr2 9954630 9954713 -240733141 + L2 LINE L2 3189 3286 -27 189 245 0 57 chr2 9954761 9954814 -240733040 + L2 LINE L2 3263 3312 -1 236 240 125 60 chr2 9954829 9955029 -240732825 - LTR33 LTR ERVL -6 515 303 220 161 57 218 chr2 9955183 9955307 -240732547 - MIR SINE MIR -86 176 73 405 248 110 9 chr2 9955460 9955569 -240732285 + MIR SINE MIR 93 212 -50 898 143 0 0 chr2 9955629 9955755 -240732099 + AluJ SINE Alu 1 126 -176 684 183 8 38 chr2 9955763 9955894 -240731960 + AluJ SINE Alu 183 309 -3 275 293 63 103 chr2 9956421 9956517 -240731337 - MIR SINE MIR -75 187 100 2374 115 0 0 chr2 9956517 9956829 -240731025 + AluSx SINE Alu 1 312 0 275 293 63 103 chr2 9956829 9956906 -240730948 - MIR SINE MIR -162 100 21 906 271 35 48 chr2 9957033 9957336 -240730518 - L1ME4a LINE L1 -208 5913 5615 2323 73 3 20 chr2 9957336 9957637 -240730217 - AluSc SINE Alu -13 296 1 906 271 35 48 chr2 9957637 9957731 -240730123 - L1ME4a LINE L1 -506 5615 5521 2184 127 10 0 chr2 9958022 9958329 -240729525 - AluSx SINE Alu -2 310 1 2198 74 7 21 chr2 9958346 9958680 -240729174 - AluY SINE Alu 0 330 1 1484 161 48 48 chr2 9958688 9958832 -240729022 - AluJo SINE Alu -21 291 148 2154 85 3 62 chr2 9958832 9959139 -240728715 - AluSp SINE Alu -24 289 1 1484 161 48 48 chr2 9959139 9959285 -240728569 - AluJo SINE Alu -163 149 1 2218 110 0 13 chr2 9959884 9960185 -240727669 + AluSx SINE Alu 7 303 -9 924 152 226 17 chr2 9960188 9960243 -240727611 + Tigger3(Golem) DNA MER2_type 2761 2803 -235 2180 100 11 0 chr2 9960243 9960545 -240727309 + AluSq SINE Alu 2 306 0 924 152 226 17 chr2 9960545 9960718 -240727136 + Tigger3(Golem) DNA MER2_type 2803 3038 0 21 82 0 0 chr2 9960731 9960780 -240727074 + AT_rich Low_complexity Low_complexity 1 49 0 1359 233 10 0 chr2 9960808 9961117 -240726737 - AluSq SINE Alu -1 312 1 2242 99 13 0 chr2 9961261 9961564 -240726290 - AluSx SINE Alu -5 307 1 729 183 0 0 chr2 9962731 9962851 -240725003 + FAM SINE Alu 40 159 -26 234 0 0 0 chr2 9962851 9962877 -240724977 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 2193 104 7 19 chr2 9962909 9963217 -240724637 - AluSc SINE Alu -5 304 1 336 70 0 0 chr2 9963946 9963989 -240723865 + Alu SINE Alu 1 43 -259 331 330 26 9 chr2 9964084 9964199 -240723655 - MIR SINE MIR -144 118 2 204 111 0 0 chr2 9964266 9964302 -240723552 + (T)n Simple_repeat Simple_repeat 1 36 0 23 33 0 0 chr2 9964303 9964333 -240723521 + AT_rich Low_complexity Low_complexity 1 30 0 2043 102 17 3 chr2 9964342 9964636 -240723218 + AluSx SINE Alu 1 298 -14 196 309 186 0 chr2 9964842 9964939 -240722915 - L2 LINE L2 -14 3258 3144 345 264 44 0 chr2 9965209 9965300 -240722554 - L2 LINE L2 -17 3255 3161 568 215 164 94 chr2 9965794 9966050 -240721804 - MLT1B LTR MaLR 0 390 117 222 159 23 0 chr2 9966314 9966358 -240721496 + MIR SINE MIR 111 155 -107 2208 101 0 0 chr2 9966382 9966678 -240721176 - AluSg SINE Alu -13 297 2 2089 104 0 23 chr2 9968922 9969221 -240718633 + AluSg SINE Alu 1 292 -18 368 288 16 76 chr2 9970560 9970734 -240717120 - MIR SINE MIR -40 168 2 21 36 0 0 chr2 9970827 9970855 -240716999 + AT_rich Low_complexity Low_complexity 1 28 0 312 173 0 0 chr2 9970857 9970909 -240716945 + L1MD2 LINE L1 6183 6234 -125 323 209 0 114 chr2 9970914 9971115 -240716739 + (TATAG)n Simple_repeat Simple_repeat 3 180 0 456 192 48 0 chr2 9971163 9971267 -240716587 + L1MD2 LINE L1 6251 6359 0 21 0 0 0 chr2 9971357 9971378 -240716476 + AT_rich Low_complexity Low_complexity 1 21 0 1875 153 0 7 chr2 9971381 9971682 -240716172 - AluSx SINE Alu 0 312 14 2193 113 0 0 chr2 9971689 9971990 -240715864 - AluSx SINE Alu -11 301 1 57 61 0 0 chr2 9971994 9972093 -240715761 + AT_rich Low_complexity Low_complexity 1 99 0 263 277 45 45 chr2 9972280 9972392 -240715462 + MER63 DNA MER1_type 682 793 -268 209 318 238 14 chr2 9973432 9973655 -240714199 + L3 LINE CR1 1200 1472 -105 2013 132 13 0 chr2 9973655 9973959 -240713895 + AluSx SINE Alu 1 308 -4 2187 96 3 0 chr2 9974349 9974641 -240713213 + AluSp SINE Alu 1 293 -20 229 294 47 35 chr2 9975053 9975138 -240712716 - L2 LINE L2 -33 3239 3154 339 225 232 0 chr2 9976373 9976511 -240711343 - MIR SINE MIR -12 250 81 2153 115 0 0 chr2 9977617 9977912 -240709942 - AluSx SINE Alu -17 295 1 200 242 116 32 chr2 9979539 9979634 -240708220 - MIR SINE MIR -52 210 108 201 213 0 0 chr2 9980496 9980543 -240707311 + (TG)n Simple_repeat Simple_repeat 1 47 0 1832 115 17 20 chr2 9982453 9982748 -240705106 - AluSq SINE Alu -14 299 6 2041 121 3 16 chr2 9985278 9985591 -240702263 - AluSq SINE Alu -4 309 1 282 56 0 0 chr2 9985611 9985647 -240702207 + (TA)n Simple_repeat Simple_repeat 2 37 0 1549 111 9 0 chr2 9985664 9985890 -240701964 + AluSq SINE Alu 79 306 -7 2189 81 7 7 chr2 9986932 9987227 -240700627 - AluSx SINE Alu -16 296 2 1090 100 0 19 chr2 9987507 9987667 -240700187 + AluSg/x SINE Alu 130 286 -24 1215 101 0 17 chr2 9988021 9988199 -240699655 + AluSg/x SINE Alu 130 304 -6 1024 121 54 24 chr2 9989139 9989246 -240698608 + AluSx SINE Alu 21 136 -176 2264 103 0 10 chr2 9989246 9989556 -240698298 + AluSc SINE Alu 1 307 -2 1024 121 54 24 chr2 9989556 9989614 -240698240 + AluSx SINE Alu 136 191 -121 1574 156 48 4 chr2 9992418 9992688 -240695166 - AluSx SINE Alu -18 294 13 638 87 109 0 chr2 9992788 9992880 -240694974 + AluSx SINE Alu 181 282 -30 253 208 0 0 chr2 9993530 9993578 -240694276 - MER91 DNA MER1_type 0 190 143 2210 115 0 3 chr2 9994350 9994663 -240693191 + AluSx SINE Alu 1 312 0 1411 98 0 5 chr2 9994940 9995134 -240692720 + AluSq SINE Alu 1 193 -120 194 260 40 0 chr2 9995788 9995838 -240692016 + MIR SINE MIR 31 82 -180 495 213 125 7 chr2 9995894 9995975 -240691879 + MIR SINE MIR 111 181 -81 231 61 0 0 chr2 9995975 9996008 -240691846 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 495 213 125 7 chr2 9996008 9996062 -240691792 + MIR SINE MIR 181 262 0 1967 117 32 0 chr2 9996548 9996831 -240691023 - AluSx SINE Alu -12 300 9 1404 159 13 0 chr2 9997418 9997657 -240690197 - AluJb SINE Alu -13 299 58 1696 178 0 7 chr2 9997704 9998013 -240689841 - AluSx SINE Alu 0 307 1 762 151 0 0 chr2 9999970 10000089 -240687765 - AluSx SINE Alu 0 310 192 1060 113 0 0 chr2 10000090 10000231 -240687623 - AluSx SINE Alu -171 141 1 1750 127 7 7 chr2 10000721 10000996 -240686858 + AluSx SINE Alu 9 283 -29 23 33 0 0 chr2 10001335 10001365 -240686489 + GC_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chr2 10001570 10001596 -240686258 + GC_rich Low_complexity Low_complexity 1 26 0 257 254 55 55 chr2 10002135 10002245 -240685609 + MER69 DNA AcHobo 32 141 -2385 700 177 8 0 chr2 10002263 10002387 -240685467 - FRAM SINE Alu -54 122 1 1405 108 0 0 chr2 10002395 10002589 -240685265 - AluSp SINE Alu -13 300 107 1470 103 0 0 chr2 10002589 10002784 -240685070 - AluSp SINE Alu -118 195 1 282 222 48 0 chr2 10002785 10002848 -240685006 + MER69 DNA AcHobo 132 197 -1029 180 225 0 0 chr2 10002965 10003005 -240684849 - L2 LINE L2 -227 3045 3006 1289 171 3 71 chr2 10004187 10004244 -240683610 - L1MB4 LINE L1 0 6180 6121 371 150 17 0 chr2 10004244 10004304 -240683550 - U7 snRNA snRNA 0 63 3 2142 98 10 3 chr2 10004308 10004604 -240683250 - AluSx SINE Alu -14 298 1 1289 171 3 71 chr2 10004604 10004831 -240683023 - L1MB4 LINE L1 -62 6118 5911 2194 99 3 13 chr2 10004831 10005145 -240682709 - AluSq SINE Alu -2 311 1 1289 171 3 71 chr2 10005145 10005163 -240682691 - L1MB4 LINE L1 -269 5911 5893 435 289 4 83 chr2 10005192 10005458 -240682396 - L1MC4 LINE L1 -371 7671 7427 265 272 102 39 chr2 10006463 10006669 -240681185 + MLT1J1 LTR MaLR 228 446 0 2260 174 33 8 chr2 10006883 10006926 -240680928 - L1MB3 LINE L1 -12 6159 6119 1838 140 7 20 chr2 10006926 10007226 -240680628 - AluJb SINE Alu -16 296 1 2260 174 33 8 chr2 10007226 10007241 -240680613 - L1MB3 LINE L1 -52 6119 6106 1888 126 7 11 chr2 10007241 10007582 -240680272 - AluSp SINE Alu 0 340 1 2260 174 33 8 chr2 10007582 10007996 -240679858 - L1MB3 LINE L1 -65 6106 5711 1779 219 82 13 chr2 10008255 10008706 -240679148 + LTR65 LTR ERV1 167 648 -21 294 284 42 21 chr2 10008723 10008818 -240679036 - MIR SINE MIR -60 202 106 1507 243 43 102 chr2 10008828 10009478 -240678376 - LTR9 LTR ERV1 0 612 1 479 259 98 51 chr2 10009490 10009726 -240678128 - MLT1G1 LTR MaLR -163 432 186 270 263 25 12 chr2 10009753 10009833 -240678021 - MLT1G1 LTR MaLR -500 90 10 240 353 111 24 chr2 10009848 10010137 -240677717 + L2 LINE L2 2959 3272 0 1903 158 3 0 chr2 10010391 10010683 -240677171 - AluJb SINE Alu -19 293 1 22 0 0 0 chr2 10010694 10010716 -240677138 + AT_rich Low_complexity Low_complexity 1 22 0 1883 138 25 0 chr2 10010716 10010998 -240676856 - AluJb SINE Alu -23 289 1 207 0 0 0 chr2 10011008 10011031 -240676823 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2335 62 0 0 chr2 10011033 10011321 -240676533 - AluY SINE Alu -23 288 1 366 299 120 37 chr2 10012230 10012447 -240675407 + L2 LINE L2 2396 2630 -684 1063 323 41 31 chr2 10012471 10012889 -240674965 + LTR16A LTR ERVL 1 422 -28 370 358 74 6 chr2 10012923 10013085 -240674769 + LTR16A LTR ERVL 16 188 -262 251 231 0 0 chr2 10013181 10013233 -240674621 + MLT1K LTR MaLR 177 228 -360 470 315 165 9 chr2 10013263 10013584 -240674270 + MLT1K LTR MaLR 184 554 -34 2915 127 36 18 chr2 10013615 10014116 -240673738 + MLT2A1 LTR ERVL 1 519 -1 3392 185 28 6 chr2 10014218 10015071 -240672783 + L1MB8 LINE L1 5117 5992 -186 534 132 0 97 chr2 10015080 10015128 -240672726 + L1MB8 LINE L1 6073 6105 -73 2265 103 10 0 chr2 10015128 10015419 -240672435 - AluSq SINE Alu -19 294 1 534 132 0 97 chr2 10015419 10015484 -240672370 + L1MB8 LINE L1 6105 6175 -3 409 274 207 58 chr2 10015488 10015839 -240672015 + L2 LINE L2 2735 3189 -124 2176 117 3 0 chr2 10015839 10016122 -240671732 - AluSx SINE Alu -28 284 1 409 274 207 58 chr2 10016122 10016263 -240671591 + L2 LINE L2 3189 3308 -5 2247 129 0 0 chr2 10016301 10016596 -240671258 + AluSx SINE Alu 1 295 -17 22 0 0 0 chr2 10016657 10016679 -240671175 + AT_rich Low_complexity Low_complexity 1 22 0 1814 143 26 32 chr2 10016695 10017037 -240670817 - L1MC1 LINE L1 -6 6327 5988 230 269 19 0 chr2 10018403 10018455 -240669399 + L2 LINE L2 2577 2629 -685 269 132 0 19 chr2 10018468 10018521 -240669333 - L1MA3 LINE L1 0 6305 6254 303 276 198 39 chr2 10018760 10019043 -240668811 + L2 LINE L2 2944 3271 -1 184 204 41 0 chr2 10020662 10020711 -240667143 - L2 LINE L2 -37 3235 3185 611 63 0 0 chr2 10020720 10020799 -240667055 + AluJ/FRAM SINE Alu 227 305 -7 417 265 10 10 chr2 10020806 10020904 -240666950 - L2 LINE L2 -4 3309 3212 550 270 74 14 chr2 10020922 10021137 -240666717 + L1ME3A LINE L1 5610 5837 -333 546 91 0 0 chr2 10023458 10023535 -240664319 + (TTCC)n Simple_repeat Simple_repeat 1 77 0 2193 107 10 3 chr2 10023536 10023826 -240664028 - AluSx SINE Alu -19 293 2 2297 88 3 7 chr2 10024529 10024825 -240663029 + AluSx SINE Alu 1 295 -17 763 178 0 0 chr2 10025115 10025271 -240662583 - FLAM_C SINE Alu 0 157 2 661 199 125 18 chr2 10025310 10025528 -240662326 - L1MB7 LINE L1 0 6168 5933 576 256 63 49 chr2 10026253 10026476 -240661378 - MIR SINE MIR -13 249 24 234 0 0 0 chr2 10026658 10026684 -240661170 + (TG)n Simple_repeat Simple_repeat 1 26 0 354 232 152 56 chr2 10027064 10027189 -240660665 - L2 LINE L2 0 3313 3177 1640 184 122 6 chr2 10027992 10028319 -240659535 - MLT1A1 LTR MaLR 0 365 1 195 294 0 0 chr2 10028736 10028787 -240659067 - MIR SINE MIR -6 256 206 291 238 159 72 chr2 10029462 10029565 -240658289 - LTR50 LTR ERVL 0 795 702 1207 207 194 20 chr2 10029565 10029961 -240657893 + MLT1C LTR MaLR 1 465 -2 291 238 159 72 chr2 10029961 10030147 -240657707 - LTR50 LTR ERVL -93 702 481 198 0 0 0 chr2 10030237 10030259 -240657595 + (GA)n Simple_repeat Simple_repeat 2 23 0 670 186 22 71 chr2 10030396 10030579 -240657275 - LTR41 LTR ERVL -599 174 1 247 348 160 8 chr2 10030769 10030894 -240656960 - MIR SINE MIR -71 137 11 548 252 39 32 chr2 10031647 10031703 -240656151 - MIR SINE MIR -7 255 201 2246 119 0 10 chr2 10031703 10032015 -240655839 - AluSq SINE Alu -4 309 1 548 252 39 32 chr2 10032015 10032113 -240655741 - MIR SINE MIR -61 201 100 185 0 0 39 chr2 10032585 10032611 -240655243 + (CAAAA)n Simple_repeat Simple_repeat 3 27 0 224 279 44 15 chr2 10032696 10032764 -240655090 - MIR SINE MIR -171 91 22 331 271 44 117 chr2 10033008 10033325 -240654529 - L2 LINE L2 -346 2968 2675 2239 120 0 0 chr2 10033490 10033791 -240654063 - AluSx SINE Alu -11 301 1 769 276 113 16 chr2 10033848 10034226 -240653628 - L1MC4a LINE L1 -296 5825 5524 317 198 22 0 chr2 10034688 10034779 -240653075 - MER96 DNA MER1_type? -82 93 1 181 276 58 11 chr2 10036871 10036958 -240650896 - MIR3 SINE MIR -103 105 15 220 231 77 77 chr2 10037142 10037220 -240650634 - MIR SINE MIR -16 246 169 298 268 99 42 chr2 10037703 10037845 -240650009 + MIR SINE MIR 47 196 -66 2396 117 120 5 chr2 10037985 10038369 -240649485 - MSTA LTR MaLR 0 428 1 441 134 0 37 chr2 10038369 10038451 -240649403 - MSTA-int LTR MaLR 0 1580 1502 2270 102 0 0 chr2 10038451 10038744 -240649110 - AluSx SINE Alu -19 293 1 533 237 10 110 chr2 10038796 10038873 -240648981 + MER34 LTR ERV1 281 364 -178 4590 97 4 39 chr2 10038873 10039276 -240648578 + MER4A LTR ERV1 1 416 -248 1971 164 0 3 chr2 10039276 10039587 -240648267 + AluJb SINE Alu 1 310 -2 4590 97 4 39 chr2 10039587 10039730 -240648124 + MER4A LTR ERV1 416 521 -143 2323 101 0 7 chr2 10039730 10040026 -240647828 + AluSx SINE Alu 1 294 -18 4590 97 4 39 chr2 10040026 10040166 -240647688 + MER4A LTR ERV1 521 664 0 533 237 10 110 chr2 10040166 10040379 -240647475 + MER34 LTR ERV1 364 542 0 1609 175 26 0 chr2 10040379 10040682 -240647172 - L1MB3 LINE L1 -74 6109 5799 336 200 100 12 chr2 10040682 10040762 -240647092 + MER21B LTR ERV1 1 87 -776 2764 256 46 8 chr2 10040786 10041544 -240646310 + MER21B LTR ERV1 19 805 -58 2509 162 11 62 chr2 10041570 10042127 -240645727 - L1MB3 LINE L1 -371 5812 5287 2353 93 7 0 chr2 10042758 10043060 -240644794 - AluSp SINE Alu -9 304 1 820 233 112 43 chr2 10043205 10043579 -240644275 + MER110A LTR ERV1 39 438 -30 448 228 81 47 chr2 10044351 10044500 -240643354 + MIR SINE MIR 20 173 -89 493 205 0 0 chr2 10046213 10046296 -240641558 - AluJ/FLAM SINE Alu -228 84 2 2436 87 0 0 chr2 10046363 10046662 -240641192 + AluSg SINE Alu 1 299 -11 618 227 28 0 chr2 10046895 10047036 -240640818 - MER58A DNA MER1_type -44 180 36 215 297 72 45 chr2 10047261 10047372 -240640482 - MIR SINE MIR -30 232 119 2476 58 27 0 chr2 10047777 10048069 -240639785 - AluY SINE Alu -11 300 1 819 168 0 0 chr2 10048117 10048242 -240639612 + FLAM_A SINE Alu 18 142 0 203 252 107 48 chr2 10048611 10048714 -240639140 - MIR SINE MIR -59 203 95 2242 119 3 3 chr2 10049619 10049931 -240637923 + AluSx SINE Alu 1 312 0 2015 116 38 20 chr2 10050013 10050306 -240637548 + AluSx SINE Alu 1 298 -14 184 308 221 29 chr2 10050435 10050539 -240637315 + MER5A DNA MER1_type 65 188 -1 * 193 222 44 0 chr2 10050539 10050581 -240637273 - MIR3 SINE MIR -52 156 113 203 268 18 0 chr2 10050725 10050781 -240637073 + GA-rich Low_complexity Low_complexity 4 60 0 274 215 118 0 chr2 10050887 10050989 -240636865 - L1ME LINE L1 -306 5856 5743 373 253 120 19 chr2 10051044 10051202 -240636652 - MIR SINE MIR -27 235 62 204 97 0 0 chr2 10051620 10051651 -240636203 + (A)n Simple_repeat Simple_repeat 1 31 0 1132 224 88 58 chr2 10051689 10051935 -240635919 + Charlie4a DNA MER1_type 37 274 -1687 1391 171 0 0 chr2 10051935 10052169 -240635685 + MER46A DNA MER2_type 3 236 0 1132 224 88 58 chr2 10052169 10052297 -240635557 + Charlie4a DNA MER1_type 274 430 -1531 1612 185 9 64 chr2 10052297 10052627 -240635227 - AluJb SINE Alu 0 312 1 1132 224 88 58 chr2 10052627 10052703 -240635151 + Charlie4a DNA MER1_type 430 502 -6 1810 167 11 0 chr2 10052719 10053001 -240634853 + AluJb SINE Alu 7 291 -21 314 304 80 9 chr2 10054604 10054716 -240633138 - MIR SINE MIR -38 224 105 187 150 25 25 chr2 10054826 10054866 -240632988 + L2 LINE L2 3176 3215 -98 2478 80 3 0 chr2 10054873 10055173 -240632681 - AluSp SINE Alu -12 301 1 383 200 12 0 chr2 10055486 10055566 -240632288 + Tigger3(Golem) DNA MER2_type 28 108 -2921 * 506 131 39 108 chr2 10055558 10055620 -240632234 + Tigger3(Golem) DNA MER2_type 2279 2329 -700 2581 62 0 0 chr2 10055620 10055924 -240631930 - AluY SINE Alu -7 304 1 506 131 39 108 chr2 10055924 10055991 -240631863 + Tigger3(Golem) DNA MER2_type 2329 2399 -630 6021 25 5 0 chr2 10055992 10056739 -240631115 - L1P LINE L1 -1097 5049 4299 7451 15 42 0 chr2 10056739 10057754 -240630100 + L1PA2 LINE L1 5104 6155 0 454 132 49 56 chr2 10057756 10057802 -240630052 + Tigger3(Golem) DNA MER2_type 2381 2426 -603 1951 130 23 23 chr2 10057802 10058109 -240629745 + AluJo SINE Alu 1 307 -5 454 132 49 56 chr2 10058109 10058206 -240629648 + Tigger3(Golem) DNA MER2_type 2426 2523 -506 640 199 7 41 chr2 10058212 10058358 -240629496 + FLAM_C SINE Alu 3 143 0 229 135 19 0 chr2 10058359 10058411 -240629443 + Tigger3(Golem) DNA MER2_type 2515 2567 -462 1616 142 45 7 chr2 10058416 10058704 -240629150 + Tigger3(Golem) DNA MER2_type 2683 2981 -48 1638 148 79 11 chr2 10058928 10059206 -240628648 - AluJo SINE Alu -15 297 1 226 286 0 0 chr2 10059246 10059316 -240628538 - L1M4 LINE L1 -2225 3921 3852 216 293 157 36 chr2 10059515 10059655 -240628199 - MIR SINE MIR -42 220 64 276 281 47 47 chr2 10059798 10059926 -240627928 - L2 LINE L2 -523 2791 2664 224 274 271 31 chr2 10059986 10060344 -240627510 - L2 LINE L2 -1343 1971 1528 961 162