310 188 0 0 chr20_random 269 317 -825856 - L2 LINE L2 -16 3256 3209 2274 110 0 3 chr20_random 1513 1813 -824360 + AluSg SINE Alu 1 299 -11 357 224 51 31 chr20_random 1903 2001 -824172 - MIR SINE MIR -66 196 97 2112 137 0 3 chr20_random 2073 2423 -823750 + AluSx SINE Alu 1 349 0 1061 142 23 0 chr20_random 2495 2671 -823502 + Tigger1 DNA MER2_type 1 180 -2238 626 58 23 0 chr20_random 2784 2871 -823302 - AluS SINE Alu -224 89 1 2772 151 50 74 chr20_random 2997 3489 -822684 + LTR8A LTR ERV1 83 556 -171 1962 129 7 14 chr20_random 3489 3784 -822389 + AluY SINE Alu 1 293 -18 2772 151 50 74 chr20_random 3784 3952 -822221 + LTR8A LTR ERV1 556 727 0 880 164 121 39 chr20_random 4039 4271 -821902 + LTR45B LTR ERV1 225 475 -14 381 182 90 6 chr20_random 4346 4510 -821663 + L1M3d LINE L1 1031 1537 -4766 * 858 244 159 0 chr20_random 4501 4866 -821307 + L1M3d LINE L1 3052 3474 -2908 14011 135 85 14 chr20_random 5021 7434 -818739 - L1M1 LINE L1 -4114 3451 867 822 242 69 51 chr20_random 7569 7787 -818386 + L1ME3A LINE L1 5827 6055 -115 2390 86 0 0 chr20_random 7787 8079 -818094 - AluSg SINE Alu -18 292 1 822 242 69 51 chr20_random 8079 8195 -817978 + L1ME3A LINE L1 6055 6167 -3 601 283 23 74 chr20_random 8942 9057 -817116 - MIR SINE MIR -8 254 135 1953 128 52 6 chr20_random 9057 9402 -816771 + MER46B DNA MER2_type 1 236 0 601 283 23 74 chr20_random 9402 9544 -816629 - MIR SINE MIR -127 135 10 791 137 50 75 chr20_random 10515 10546 -815627 + MER31-int LTR ERV1 4053 4083 -853 2474 82 0 0 chr20_random 10546 10850 -815323 + AluY SINE Alu 1 304 -7 791 137 50 75 chr20_random 10850 10979 -815194 + MER31-int LTR ERV1 4083 4209 -727 292 210 136 12 chr20_random 10998 11079 -815094 + LTR37A LTR ERV1 1 91 -335 959 186 16 78 chr20_random 11090 11332 -814841 + MER31-int LTR ERV1 4340 4566 -370 1678 201 64 39 chr20_random 11365 11818 -814355 + MER31B LTR ERV1 1 661 0 2264 83 0 49 chr20_random 12552 12876 -813297 - AluSc SINE Alu -1 308 1 30 27 0 0 chr20_random 13398 13435 -812738 + AT_rich Low_complexity Low_complexity 1 37 0 2196 101 31 0 chr20_random 13534 13822 -812351 + AluSq SINE Alu 1 297 -16 413 273 55 0 chr20_random 13894 14004 -812169 - MIR SINE MIR -136 126 11 1318 128 5 1 chr20_random 14257 48403 -777770 - ALR/Alpha Satellite centromeric 0 34273 1 12160 35 0 0 chr20_random 48403 49967 -776206 - L1PA2 LINE L1 -2147 3999 2436 11347 35 0 0 chr20_random 49967 52103 -774070 + L1PA2 LINE L1 4017 6153 -2 1246 122 12 1 chr20_random 52103 62357 -763816 - ALR/Alpha Satellite centromeric 0 10363 1 6892 64 3 0 chr20_random 62385 63452 -762721 - L1PA3 LINE L1 0 6155 5088 1198 126 7 1 chr20_random 63452 75081 -751092 - ALR/Alpha Satellite centromeric 0 11700 1 221 242 16 0 chr20_random 75791 75853 -750320 + GA-rich Low_complexity Low_complexity 1 63 0 324 94 0 0 chr20_random 75855 75908 -750265 + (CA)n Simple_repeat Simple_repeat 2 54 0 865 279 66 50 chr20_random 76008 76762 -749411 - SST1 Satellite centromeric -334 1229 464 602 89 0 126 chr20_random 76762 76897 -749276 + THE1A-int LTR MaLR 1463 1580 0 2159 147 0 22 chr20_random 76899 77260 -748913 + THE1A LTR MaLR 3 355 0 250 236 97 7 chr20_random 77313 77457 -748716 - L1M LINE L1 -745 5425 5269 1680 141 106 7 chr20_random 77560 77844 -748329 - AluSx SINE Alu 0 312 1 742 273 38 16 chr20_random 77937 78256 -747917 - L1M4 LINE L1 -1088 5058 4733 415 82 27 0 chr20_random 78271 78344 -747829 + (TA)n Simple_repeat Simple_repeat 1 75 0 1522 181 7 41 chr20_random 78354 78646 -747527 - AluJo SINE Alu -30 282 1 2231 125 0 0 chr20_random 79611 79914 -746259 - AluSq SINE Alu -10 303 1 1891 157 0 3 chr20_random 80163 80450 -745723 - AluSq SINE Alu -25 288 3 187 140 260 0 chr20_random 80571 80621 -745552 + MIR3 SINE MIR 129 191 -17 767 206 0 0 chr20_random 80668 80809 -745364 - FLAM_C SINE Alu -2 141 1 1433 179 52 35 chr20_random 81267 81557 -744616 + AluJb SINE Alu 1 295 -17 536 128 248 26 chr20_random 81559 81676 -744497 + Tigger1 DNA MER2_type 1066 1208 -1210 * 4874 150 3 36 chr20_random 81664 81893 -744280 + Tigger1 DNA MER2_type 1545 1780 -638 2161 120 3 0 chr20_random 81893 82184 -743989 - AluSp SINE Alu -21 292 1 4874 150 3 36 chr20_random 82184 82719 -743454 + Tigger1 DNA MER2_type 1780 2277 -141 1862 124 66 0 chr20_random 82719 82993 -743180 - AluSx SINE Alu -19 293 2 4874 150 3 36 chr20_random 82993 83131 -743042 + Tigger1 DNA MER2_type 2277 2418 0 323 294 17 8 chr20_random 83131 83249 -742924 - LTR16C LTR ERVL -14 477 359 975 290 105 23 chr20_random 83617 84149 -742024 + MER115 DNA AcHobo 15 631 -62 1568 143 3 17 chr20_random 84570 84857 -741316 - L1MA4 LINE L1 0 6300 6018 356 212 7 146 chr20_random 85246 85383 -740790 - MIR SINE MIR -101 161 44 1997 136 0 14 chr20_random 85489 85784 -740389 + AluSx SINE Alu 7 297 -15 298 309 52 0 chr20_random 85883 85980 -740193 - L2 LINE L2 -18 3295 3194 448 320 62 21 chr20_random 86535 86729 -739444 - MIR SINE MIR -12 250 49 2287 43 0 0 chr20_random 86740 87020 -739153 + L1PA3 LINE L1 5874 6153 -2 37 23 0 0 chr20_random 87429 87473 -738700 + AT_rich Low_complexity Low_complexity 1 44 0 240 296 24 8 chr20_random 87494 87619 -738554 + L1M4 LINE L1 3739 3865 -2281 572 111 0 11 chr20_random 87715 87805 -738368 - L1PA16 LINE L1 -9 6157 6069 707 203 0 43 chr20_random 88043 88181 -737992 + FLAM_A SINE Alu 1 132 -1 1324 220 163 0 chr20_random 88182 88519 -737654 - MER93a LTR ERV1 -7 395 4 2414 177 43 56 chr20_random 88991 89480 -736693 + L1MB3 LINE L1 5099 5593 -590 1575 150 0 0 chr20_random 89480 89713 -736460 + AluSg SINE Alu 1 233 -77 2414 177 43 56 chr20_random 89713 89734 -736439 + L1MB3 LINE L1 5593 5613 -570 456 19 0 0 chr20_random 89734 89787 -736386 + (TAAA)n Simple_repeat Simple_repeat 4 56 0 2414 177 43 56 chr20_random 89787 90011 -736162 + L1MB3 LINE L1 5613 5832 -351 22 35 0 0 chr20_random 90085 90114 -736059 + AT_rich Low_complexity Low_complexity 1 29 0 7893 95 19 15 chr20_random 91102 92391 -733782 + L1PA8 LINE L1 4047 5359 -813 2148 118 0 10 chr20_random 92391 92688 -733485 + AluSq SINE Alu 1 294 -19 7893 95 19 15 chr20_random 92688 93503 -732670 + L1PA8 LINE L1 5359 6169 -3 1959 152 15 15 chr20_random 94507 94850 -731323 + MER7A DNA MER2_type 1 341 -5 275 279 0 25 chr20_random 95292 95371 -730802 + L2 LINE L2 3182 3258 -55 1543 139 107 14 chr20_random 95962 96243 -729930 + AluSx SINE Alu 1 307 -5 819 258 90 47 chr20_random 96327 96525 -729648 + L1ME LINE L1 5268 5456 -706 1977 158 3 22 chr20_random 96525 96885 -729288 - THE1A LTR MaLR 0 355 3 10706 116 9 12 chr20_random 96887 98472 -727701 - THE1A-int LTR MaLR 0 1580 1 2378 108 3 43 chr20_random 98472 98842 -727331 - THE1A LTR MaLR 0 355 1 819 258 90 47 chr20_random 98842 99127 -727046 + L1ME LINE L1 5455 5776 -386 21 0 0 0 chr20_random 99516 99537 -726636 + AT_rich Low_complexity Low_complexity 1 21 0 1059 188 60 109 chr20_random 99547 99931 -726242 + MLT1A1 LTR MaLR 1 365 0 1086 216 15 23 chr20_random 101173 101437 -724736 + AluJo SINE Alu 15 276 -36 934 265 91 43 chr20_random 101438 102109 -724064 + SST1 Satellite centromeric 861 1563 0 206 148 19 0 chr20_random 102130 102184 -723989 + CT-rich Low_complexity Low_complexity 2 56 0 193 367 177 16 chr20_random 102832 103211 -722962 - L3 LINE CR1 -85 1492 1053 236 294 29 49 chr20_random 103666 103768 -722405 - L3 LINE CR1 -896 681 582 897 165 73 63 chr20_random 103768 103974 -722199 + AluJb SINE Alu 83 290 -22 465 238 221 12 chr20_random 104226 104398 -721775 + MIR SINE MIR 7 214 -48 216 204 0 0 chr20_random 104412 104456 -721717 + (TTA)n Simple_repeat Simple_repeat 2 45 0 7783 16 0 0 chr20_random 105658 106750 -719423 - L1PA2 LINE L1 -5 6150 5058 427 36 0 0 chr20_random 106750 106805 -719368 + L1PA2 LINE L1 5011 5065 -1081 3932 59 0 8 chr20_random 107799 108308 -717865 - L1PA5 LINE L1 0 6154 5650 2154 93 3 7 chr20_random 108308 108642 -717531 - AluY SINE Alu 0 311 1 326 372 93 17 chr20_random 108944 109353 -716820 + L2 LINE L2 618 1057 -2257 257 368 181 39 chr20_random 109450 110211 -715962 + L2 LINE L2 2082 2950 -364 2150 138 0 0 chr20_random 110337 110641 -715532 - AluSx SINE Alu -8 304 1 254 381 21 0 chr20_random 110820 110917 -715256 + L2 LINE L2 3138 3236 -36 213 395 14 14 chr20_random 111441 111588 -714585 - MER5A DNA MER1_type -35 154 8 30 0 0 0 chr20_random 111877 111907 -714266 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr20_random 113326 113348 -712825 + AT_rich Low_complexity Low_complexity 1 22 0 42370 38 21 1 chr20_random 113509 119541 -706632 - L1PA2 LINE L1 -1 6154 1 411 77 0 0 chr20_random 120116 120168 -706005 - AluS SINE Alu -238 75 24 1569 178 44 0 chr20_random 120296 120566 -705607 + AluJo SINE Alu 11 292 -20 335 390 16 36 chr20_random 120898 121149 -705024 + MIR SINE MIR 17 262 0 283 306 93 9 chr20_random 121184 121292 -704881 + MIR3 SINE MIR 85 201 -7 312 303 103 47 chr20_random 121708 121942 -704231 - L1ME3A LINE L1 -284 5886 5640 186 43 0 0 chr20_random 122904 122927 -703246 + (TA)n Simple_repeat Simple_repeat 1 23 0 248 148 16 0 chr20_random 122947 123008 -703165 + (TG)n Simple_repeat Simple_repeat 1 62 0 26 50 0 0 chr20_random 124653 124693 -701480 + AT_rich Low_complexity Low_complexity 1 40 0 1256 207 4 59 chr20_random 125829 126100 -700073 - AluJo SINE Alu -56 256 1 1907 146 4 0 chr20_random 128527 128842 -697331 - AluSx SINE Alu 0 316 1 419 319 142 19 chr20_random 129919 130179 -695994 - L2 LINE L2 0 3313 3022 186 349 17 64 chr20_random 130170 130342 -695831 - L2 LINE L2 -400 2914 2751 * 251 330 101 70 chr20_random 131176 131630 -694543 - L2 LINE L2 -6 3307 2840 349 329 130 46 chr20_random 131759 132186 -693987 - L2 LINE L2 -649 2665 2192 405 239 64 83 chr20_random 132186 132404 -693769 + MER58C DNA MER1_type 2 215 0 349 329 130 46 chr20_random 132404 132453 -693720 - L2 LINE L2 -1122 2192 2149 213 430 35 0 chr20_random 132621 132763 -693410 - L2 LINE L2 -372 2942 2796 322 289 107 0 chr20_random 132881 133002 -693171 - L2 LINE L2 -1368 1946 1813 192 77 0 0 chr20_random 134874 134900 -691273 + (TG)n Simple_repeat Simple_repeat 1 26 0 3007 169 29 4 chr20_random 135449 135974 -690199 + MER6A DNA MER2_type 1 538 -67 265 154 19 0 chr20_random 136018 136070 -690103 + L1MA1 LINE L1 6230 6282 -20 248 103 128 0 chr20_random 136071 136110 -690063 + MER6A DNA MER2_type 562 605 0 577 257 22 68 chr20_random 136151 136373 -689800 - MER58C DNA MER1_type -2 213 2 1308 216 72 12 chr20_random 137330 137649 -688524 - L1MC2 LINE L1 -10 6334 5997 3126 192 98 7 chr20_random 138003 138805 -687368 - L1MC2 LINE L1 -341 5992 5122 181 242 263 40 chr20_random 141713 141812 -684361 + L2 LINE L2 3190 3310 -3 22 0 0 0 chr20_random 142059 142081 -684092 + AT_rich Low_complexity Low_complexity 1 22 0 338 42 21 0 chr20_random 142219 142267 -683906 + (CA)n Simple_repeat Simple_repeat 2 50 0 31 58 0 0 chr20_random 142373 142425 -683748 + AT_rich Low_complexity Low_complexity 1 52 0 189 304 101 0 chr20_random 143282 143351 -682822 - L2 LINE L2 -2 3270 3195 317 303 63 14 chr20_random 145250 145392 -680781 - L2 LINE L2 -81 3232 3084 189 401 35 21 chr20_random 145705 145847 -680326 + MIR3 SINE MIR 57 200 -8 23 86 0 0 chr20_random 146162 146220 -679953 + AT_rich Low_complexity Low_complexity 1 58 0 2714 211 36 2 chr20_random 146816 147399 -678774 - LTR26 LTR ERV1 0 603 1 441 54 0 0 chr20_random 147400 147456 -678717 + (TA)n Simple_repeat Simple_repeat 1 56 0 225 264 19 0 chr20_random 147652 147705 -678468 + MIR SINE MIR 74 127 -135 7343 37 11 0 chr20_random 147891 149173 -677000 - L1PA4 LINE L1 -1 6154 4868 12692 33 1 1 chr20_random 149173 150708 -675465 + L1PA4 LINE L1 3368 4901 -1245 250 234 191 53 chr20_random 151023 151211 -674962 - MIR SINE MIR -48 214 1 451 266 26 13 chr20_random 151894 152048 -674125 + L1M4c LINE L1 1446 1601 -4783 970 207 12 106 chr20_random 152873 153202 -672971 - AluSp SINE Alu -5 308 11 25 65 0 0 chr20_random 153211 153257 -672916 + AT_rich Low_complexity Low_complexity 1 46 0 1238 182 26 106 chr20_random 153337 153760 -672413 - MLT1B LTR MaLR 0 390 2 29 90 0 0 chr20_random 154234 154312 -671861 + AT_rich Low_complexity Low_complexity 1 78 0 340 324 102 37 chr20_random 155145 155361 -670812 + MIR SINE MIR 15 244 -18 24 85 0 0 chr20_random 156294 156353 -669820 + AT_rich Low_complexity Low_complexity 1 59 0 183 356 0 17 chr20_random 156540 156599 -669574 + L2 LINE L2 3232 3289 -24 22 0 0 0 chr20_random 156609 156631 -669542 + AT_rich Low_complexity Low_complexity 1 22 0 3566 199 53 36 chr20_random 157140 158432 -667741 - L1MA9 LINE L1 -76 6236 4926 206 32 32 0 chr20_random 159104 159135 -667038 + (TTA)n Simple_repeat Simple_repeat 3 34 0 652 301 12 0 chr20_random 159478 159641 -666532 + MER58A DNA MER1_type 2 166 0 1658 167 22 26 chr20_random 159943 160254 -665919 - AluSx SINE Alu 0 312 3 247 267 0 11 chr20_random 160396 160486 -665687 + (TAA)n Simple_repeat Simple_repeat 2 90 0 21 0 0 0 chr20_random 160797 160818 -665355 + AT_rich Low_complexity Low_complexity 1 21 0 962 193 78 53 chr20_random 161243 161486 -664687 + Tigger2a DNA MER2_type 1 249 -185 320 269 12 0 chr20_random 161486 161593 -664580 + LTR22A LTR ERVK 375 454 -4 24 77 0 0 chr20_random 161697 161749 -664424 + AT_rich Low_complexity Low_complexity 1 52 0 224 219 0 47 chr20_random 162012 162076 -664097 + (CATATA)n Simple_repeat Simple_repeat 5 65 0 273 366 78 0 chr20_random 162510 162663 -663510 + MIR SINE MIR 57 221 -41 829 150 0 0 chr20_random 162740 162867 -663306 + FLAM_C SINE Alu 1 127 -16 30 45 0 0 chr20_random 162998 163042 -663131 + AT_rich Low_complexity Low_complexity 1 44 0 314 152 0 0 chr20_random 163485 163531 -662642 - U6 snRNA snRNA 0 107 62 24 0 0 0 chr20_random 163782 163806 -662367 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr20_random 165033 165054 -661119 + AT_rich Low_complexity Low_complexity 1 21 0 318 26 0 0 chr20_random 166720 166759 -659414 + (CA)n Simple_repeat Simple_repeat 2 40 0 1178 55 12 12 chr20_random 166995 167159 -659014 - L1PA4 LINE L1 0 6155 5992 794 105 24 7 chr20_random 167159 167288 -658885 + L1PA4 LINE L1 5805 5897 -258 1619 277 77 27 chr20_random 168668 169224 -656949 - MLT1E LTR MaLR -9 584 1 23 68 0 0 chr20_random 169736 169780 -656393 + AT_rich Low_complexity Low_complexity 1 44 0 23 0 0 0 chr20_random 170047 170070 -656103 + AT_rich Low_complexity Low_complexity 1 23 0 263 122 37 83 chr20_random 170661 170726 -655447 + MLT1B LTR MaLR 1 65 -309 4070 244 42 45 chr20_random 170743 172109 -654064 + MLT1A2-int LTR MaLR 1 1361 -10 1032 243 48 71 chr20_random 172130 172484 -653689 + MLT1A2 LTR MaLR 16 361 -13 967 180 153 95 chr20_random 172494 172945 -653228 + L1MC2 LINE L1 5860 6336 -8 224 313 0 0 chr20_random 172989 173056 -653117 - L2 LINE L2 -1 3271 3205 901 190 28 0 chr20_random 173411 173590 -652583 - L1M3 LINE L1 -406 5777 5594 1848 148 35 0 chr20_random 174172 174455 -651718 + AluSg SINE Alu 1 293 -17 621 335 106 25 chr20_random 174662 175142 -651031 + L2 LINE L2 2158 2676 -638 22 0 0 0 chr20_random 175193 175215 -650958 + AT_rich Low_complexity Low_complexity 1 22 0 355 291 148 58 chr20_random 175475 175819 -650354 + MLT1L LTR MaLR 186 560 -55 1192 279 51 62 chr20_random 175821 176309 -649864 - MLT1H LTR MaLR 0 549 67 270 0 0 0 chr20_random 176789 176819 -649354 + (CA)n Simple_repeat Simple_repeat 2 31 0 417 189 0 49 chr20_random 176877 177062 -649111 + (TA)n Simple_repeat Simple_repeat 1 176 0 21 82 0 0 chr20_random 178214 178263 -647910 + AT_rich Low_complexity Low_complexity 1 49 0 189 0 0 0 chr20_random 178815 178836 -647337 + (TG)n Simple_repeat Simple_repeat 2 22 0 180 200 0 0 chr20_random 179032 179077 -647096 + (CATA)n Simple_repeat Simple_repeat 1 45 0 417 339 40 22 chr20_random 180170 180444 -645729 - MLT1I LTR MaLR -14 395 117 1434 203 42 55 chr20_random 180448 180597 -645576 + MLT1B LTR MaLR 1 150 -240 1968 112 40 16 chr20_random 180597 180901 -645272 - AluY SINE Alu 0 311 1 1434 203 42 55 chr20_random 180901 181135 -645038 + MLT1B LTR MaLR 150 379 -11 259 234 90 63 chr20_random 183252 183363 -642810 - L3b LINE CR1 -264 1319 1206 22 35 0 0 chr20_random 184438 184467 -641706 + AT_rich Low_complexity Low_complexity 1 29 0 2751 7 0 0 chr20_random 184535 184833 -641340 - AluY SINE Alu -13 298 1 184 255 0 20 chr20_random 185159 185210 -640963 + MER5A DNA MER1_type 42 91 -98 258 219 42 67 chr20_random 185662 185781 -640392 + MIR3 SINE MIR 87 202 -6 213 225 0 0 chr20_random 187457 187497 -638676 + (TATATG)n Simple_repeat Simple_repeat 2 41 0 3576 139 128 25 chr20_random 189614 190326 -635847 + LTR1 LTR ERV1 1 785 0 789 259 38 4 chr20_random 190490 190752 -635421 - LTR37B LTR ERV1 -25 443 173 21 57 0 0 chr20_random 192762 192797 -633376 + AT_rich Low_complexity Low_complexity 1 35 0 23 54 0 0 chr20_random 192880 192917 -633256 + AT_rich Low_complexity Low_complexity 1 37 0 335 85 153 0 chr20_random 194090 194149 -632024 + MADE1 DNA Mariner 13 80 0 234 287 78 0 chr20_random 194193 194308 -631865 + MIR SINE MIR 125 248 -14 291 376 38 8 chr20_random 194430 194563 -631610 + MLT1K LTR MaLR 100 236 -352 1832 256 78 35 chr20_random 194675 195385 -630788 - MER63C DNA MER1_type 0 930 191 2341 80 0 10 chr20_random 195495 195796 -630377 - AluY SINE Alu -13 298 1 8784 239 26 11 chr20_random 195972 198441 -627732 + L1 LINE L1 2203 4707 -1439 214 250 0 0 chr20_random 198548 198592 -627581 + (TG)n Simple_repeat Simple_repeat 2 45 0 198 71 0 0 chr20_random 198649 198677 -627496 + (TAAAAA)n Simple_repeat Simple_repeat 4 31 0 2231 90 10 0 chr20_random 199384 199683 -626490 + AluSp SINE Alu 1 302 -11 21 36 0 0 chr20_random 200416 200444 -625729 + AT_rich Low_complexity Low_complexity 1 28 0 190 280 53 27 chr20_random 202615 202690 -623483 + L3 LINE CR1 1406 1482 -95 1988 68 90 4 chr20_random 203348 203626 -622547 - AluY SINE Alu -9 302 1 1970 147 3 0 chr20_random 203706 204014 -622159 + AluSx SINE Alu 1 309 0 186 118 0 0 chr20_random 204233 204267 -621906 + (TA)n Simple_repeat Simple_repeat 2 35 0 185 424 11 11 chr20_random 205235 205327 -620846 - L2 LINE L2 -60 3212 3121 2480 280 66 51 chr20_random 207784 208724 -617449 + L1M4b LINE L1 2 955 -5904 877 255 46 54 chr20_random 208831 209199 -616974 - MLT1A1 LTR MaLR 0 365 1 3138 263 76 37 chr20_random 209212 211181 -614992 + L1M4b LINE L1 2623 4634 -2323 368 276 124 4 chr20_random 214541 214791 -611382 - L1ME2 LINE L1 -17 6147 5868 21 0 0 0 chr20_random 214806 214827 -611346 + AT_rich Low_complexity Low_complexity 1 21 0 2367 90 3 0 chr20_random 215006 215316 -610857 + AluY SINE Alu 1 311 0 243 188 0 0 chr20_random 215316 215364 -610809 + L1 LINE L1 5157 5204 -942 1955 123 14 0 chr20_random 215364 215648 -610525 + AluY SINE Alu 1 288 -23 23 0 0 0 chr20_random 215648 215671 -610502 + AT_rich Low_complexity Low_complexity 1 23 0 556 220 0 0 chr20_random 215671 215803 -610370 + L1 LINE L1 5191 5322 -824 511 261 69 80 chr20_random 217783 218439 -607734 + HSREP522 Satellite telomeric 1 648 -179 227 348 0 8 chr20_random 219614 219732 -606441 + T-rich Low_complexity Low_complexity 3 119 0 932 70 70 0 chr20_random 219897 220026 -606147 - MER85 DNA T2_type -1 138 1 2827 6 0 6 chr20_random 220681 220994 -605179 - AluY SINE Alu 0 311 1 1163 211 18 32 chr20_random 221392 221672 -604501 + LOR1-int LTR ERV1 2079 2354 -3592 907 127 94 18 chr20_random 221664 221890 -604283 + LOR1-int LTR ERV1 1828 2572 -2443 * 921 156 78 5 chr20_random 221891 222083 -604090 + LOR1-int LTR ERV1 2743 2948 -2998 1075 56 0 0 chr20_random 222088 222213 -603960 - AluSp SINE Alu -188 125 1 1892 139 21 3 chr20_random 222351 222639 -603534 - AluSx SINE Alu -19 293 1 705 169 7 47 chr20_random 222720 222868 -603305 - FLAM_C SINE Alu -1 142 1 1630 178 49 0 chr20_random 223467 223754 -602419 - AluJo SINE Alu -9 303 3 2225 89 3 55 chr20_random 223967 224293 -601880 + AluSc SINE Alu 1 309 0 21 0 0 0 chr20_random 224358 224379 -601794 + AT_rich Low_complexity Low_complexity 1 21 0 2379 85 7 0 chr20_random 224563 224868 -601305 - AluY SINE Alu -2 309 3 21 57 0 0 chr20_random 225383 225418 -600755 + AT_rich Low_complexity Low_complexity 1 35 0 2065 126 20 0 chr20_random 225635 225928 -600245 + AluSx SINE Alu 2 300 -12 582 267 87 65 chr20_random 226042 226364 -599809 - L1MC/D LINE L1 -468 5653 5339 2235 100 3 28 chr20_random 226364 226683 -599490 - AluSp SINE Alu -2 311 1 2091 131 7 0 chr20_random 226683 226980 -599193 - AluSq SINE Alu -14 299 1 582 267 87 65 chr20_random 226980 227071 -599102 - L1MC/D LINE L1 -781 5340 5265 2196 122 3 0 chr20_random 227096 227408 -598765 - AluSp SINE Alu 0 313 1 421 252 77 28 chr20_random 227461 227604 -598569 + MIR SINE MIR 54 203 -59 355 230 133 80 chr20_random 228053 228414 -597759 - L1MC/D LINE L1 -1214 4932 4553 710 278 124 39 chr20_random 228597 229164 -597009 - L2 LINE L2 -104 3209 2588 216 0 0 0 chr20_random 229197 229221 -596952 + (TG)n Simple_repeat Simple_repeat 2 25 0 202 263 12 62 chr20_random 229623 229703 -596470 + MIR SINE MIR 184 259 -3 1907 163 3 16 chr20_random 229854 230029 -596144 - AluSx SINE Alu -3 309 138 2203 115 3 10 chr20_random 230029 230334 -595839 - AluSg SINE Alu -7 303 1 1907 163 3 16 chr20_random 230334 230471 -595702 - AluSx SINE Alu -174 138 1 1913 160 3 0 chr20_random 230662 230949 -595224 - AluSx SINE Alu -24 288 1 21 36 0 0 chr20_random 230987 231015 -595158 + AT_rich Low_complexity Low_complexity 1 28 0 2166 121 3 25 chr20_random 231742 232056 -594117 - AluSc SINE Alu -2 307 1 2170 116 3 0 chr20_random 233505 233797 -592376 - AluSp SINE Alu -20 293 1 1979 127 28 3 chr20_random 233868 234152 -592021 - AluY SINE Alu -20 291 1 266 285 167 11 chr20_random 234154 234340 -591833 + L1MC4a LINE L1 5857 6071 -1737 193 323 98 8 chr20_random 234581 234714 -591459 + MIR3 SINE MIR 41 185 -23 21 0 0 0 chr20_random 234854 234875 -591298 + AT_rich Low_complexity Low_complexity 1 21 0 11804 37 7 1 chr20_random 234875 236318 -589855 - L1P LINE L1 -2159 3987 2536 379 89 0 156 chr20_random 236318 236405 -589768 + L1PA8 LINE L1 6097 6172 0 1928 134 44 3 chr20_random 236459 236757 -589416 - AluSg SINE Alu 0 310 1 1486 164 15 103 chr20_random 236776 236948 -589225 - AluJb SINE Alu -12 300 169 2629 64 0 0 chr20_random 236948 237259 -588914 - AluY SINE Alu 0 311 1 1486 164 15 103 chr20_random 237259 237415 -588758 - AluJb SINE Alu -143 169 1 32 91 0 0 chr20_random 237626 237714 -588459 + AT_rich Low_complexity Low_complexity 1 88 0 22 56 0 0 chr20_random 237814 237850 -588323 + AT_rich Low_complexity Low_complexity 1 36 0 2169 133 3 0 chr20_random 238308 238616 -587557 - AluSx SINE Alu -3 309 1 211 216 0 0 chr20_random 238880 238917 -587256 - L2 LINE L2 -19 3253 3217 274 365 51 28 chr20_random 239827 240005 -586168 - L2 LINE L2 -1911 1403 1222 516 215 80 0 chr20_random 240012 240175 -585998 - L1M4 LINE L1 -2044 4102 3927 2266 108 0 7 chr20_random 240260 240557 -585616 + AluSq SINE Alu 1 295 -18 808 240 149 73 chr20_random 240596 241039 -585134 - L1ME1 LINE L1 -26 6420 5955 6490 24 0 4 chr20_random 241051 241796 -584377 + L1PA3 LINE L1 5414 6155 0 590 189 6 173 chr20_random 241841 241904 -584269 - L1ME1 LINE L1 -949 5477 5405 2251 110 0 0 chr20_random 241904 242195 -583978 - AluSx SINE Alu -21 291 1 590 189 6 173 chr20_random 242195 242317 -583856 - L1ME1 LINE L1 -1021 5405 5362 2232 125 0 6 chr20_random 242317 242630 -583543 - AluY SINE Alu 0 311 1 590 189 6 173 chr20_random 242630 242755 -583418 - L1ME1 LINE L1 -1064 5362 5218 2219 117 0 3 chr20_random 242827 243118 -583055 - AluSx SINE Alu -22 290 1 828 83 38 13 chr20_random 243118 243275 -582898 + CT-rich Low_complexity Low_complexity 2 162 0 1778 124 26 15 chr20_random 243275 243548 -582625 - AluSx SINE Alu -36 276 1 439 250 49 22 chr20_random 243551 243735 -582438 - L1ME1 LINE L1 -2565 3861 3673 292 227 162 0 chr20_random 243797 243951 -582222 - L1ME1 LINE L1 -2853 3573 3395 * 774 257 105 27 chr20_random 243946 244286 -581887 - L1ME1 LINE L1 -4577 2030 1480 1382 169 8 40 chr20_random 244287 244441 -581732 - AluSx SINE Alu -23 289 144 2339 98 3 0 chr20_random 244441 244736 -581437 - AluSp SINE Alu -17 296 1 1382 169 8 40 chr20_random 244736 244829 -581344 - AluSx SINE Alu -168 144 50 469 275 11 34 chr20_random 245053 245231 -580942 + L1MC4 LINE L1 7865 8038 -4 242 254 182 9 chr20_random 245532 245642 -580531 - MIR3 SINE MIR -65 143 15 33 56 0 0 chr20_random 245903 245957 -580216 + AT_rich Low_complexity Low_complexity 1 54 0 298 170 38 0 chr20_random 245960 246013 -580160 - MER66B LTR ERV1 -142 344 290 204 67 0 89 chr20_random 246171 246216 -579957 + (TTTA)n Simple_repeat Simple_repeat 3 43 0 2330 84 0 7 chr20_random 246216 246514 -579659 + AluSq SINE Alu 17 312 -1 427 224 149 8 chr20_random 246588 246722 -579451 - L1ME LINE L1 -686 5435 5283 2123 112 0 0 chr20_random 246827 247133 -579040 - AluSx SINE Alu 0 312 7 259 224 0 17 chr20_random 247385 247443 -578730 + L2 LINE L2 3193 3249 -64 21 0 0 0 chr20_random 247477 247498 -578675 + AT_rich Low_complexity Low_complexity 1 21 0 180 200 0 0 chr20_random 247541 247571 -578602 - MER5A DNA MER1_type -15 174 145 2288 106 0 3 chr20_random 248010 248312 -577861 - AluSg SINE Alu -9 301 1 334 314 109 19 chr20_random 250005 250303 -575870 - L1ME LINE L1 -479 5642 5322 996 128 0 0 chr20_random 250441 250582 -575591 - AluSg/x SINE Alu -18 294 154 3879 186 54 7 chr20_random 250583 251658 -574515 - L1MB7 LINE L1 -69 6115 4997 652 289 116 33 chr20_random 251817 252585 -573588 - L1MEd LINE L1 -4576 1734 858 220 195 0 0 chr20_random 252661 252702 -573471 + T-rich Low_complexity Low_complexity 4 44 0 2149 116 6 13 chr20_random 253081 253392 -572781 + AluY SINE Alu 1 309 -2 412 248 71 14 chr20_random 254004 254145 -572028 - MIR SINE MIR -99 163 15 582 245 107 15 chr20_random 254197 254393 -571780 + MIR SINE MIR 48 261 -1 450 217 0 0 chr20_random 255270 255390 -570783 + (TCCA)n Simple_repeat Simple_repeat 3 122 0 180 263 225 0 chr20_random 255587 255667 -570506 - MIR SINE MIR -64 144 47 271 258 157 0 chr20_random 255840 255929 -570244 + MIR SINE MIR 43 145 -63 263 237 0 0 chr20_random 256093 256152 -570021 - MIR SINE MIR -89 119 61 291 260 80 0 chr20_random 256160 256260 -569913 + MIR SINE MIR 35 142 -66 519 174 5 55 chr20_random 258277 258716 -567457 + (ATGGTG)n Simple_repeat Simple_repeat 1 416 0 186 121 45 45 chr20_random 258774 258840 -567333 + (ATGGTG)n Simple_repeat Simple_repeat 1 66 0 546 254 8 0 chr20_random 258893 259019 -567154 - FLAM_A SINE Alu -6 127 1 357 278 11 64 chr20_random 259025 259212 -566961 + L1ME LINE L1 5638 5814 -307 413 266 39 8 chr20_random 259342 259470 -566703 + L2 LINE L2 3180 3311 -2 354 256 162 68 chr20_random 259622 259856 -566317 + MLT1L LTR MaLR 135 390 -225 25 31 0 0 chr20_random 260190 260222 -565951 + AT_rich Low_complexity Low_complexity 1 32 0 244 244 12 6 chr20_random 261319 261418 -564755 - MIR SINE MIR -64 144 54 316 273 27 18 chr20_random 261802 261912 -564261 - L2 LINE L2 -235 3037 2927 183 266 147 102 chr20_random 261988 262165 -564008 - MER5A DNA MER1_type -2 187 3 755 176 8 0 chr20_random 262344 262469 -563704 - FLAM_C SINE Alu -13 130 5 417 270 8 8 chr20_random 262469 262595 -563578 + L2 LINE L2 3133 3258 -55 530 115 0 0 chr20_random 263079 263157 -563016 + AluSc SINE Alu 221 298 -11 314 270 164 27 chr20_random 263589 263852 -562321 + L2 LINE L2 223 521 -2793 2205 173 29 114 chr20_random 263855 264467 -561706 + MER7C DNA MER2_type 1 560 -42 817 305 141 2 chr20_random 264529 265126 -561047 + L2 LINE L2 610 1289 -2025 362 268 16 16 chr20_random 265170 265293 -560880 - MIR SINE MIR -47 215 93 557 282 42 8 chr20_random 265351 265592 -560581 + L2 LINE L2 1324 1572 -1742 321 280 121 0 chr20_random 265676 265808 -560365 + L2 LINE L2 3139 3286 -27 265 286 174 0 chr20_random 265832 265930 -560243 - L2 LINE L2 -36 3236 3122 233 250 107 0 chr20_random 266521 266605 -559568 - L1ME LINE L1 -333 5829 5737 331 97 16 16 chr20_random 270650 270712 -555461 + (TA)n Simple_repeat Simple_repeat 1 62 0 189 107 0 0 chr20_random 272064 272092 -554081 + (GA)n Simple_repeat Simple_repeat 2 29 0 2872 22 0 0 chr20_random 272202 272517 -553656 - AluYb8 SINE Alu -3 315 1 2699 20 0 0 chr20_random 272733 273026 -553147 - AluY SINE Alu -18 293 1 972 267 77 5 chr20_random 274049 274479 -551694 - L1M4 LINE L1 -3417 2729 2269 30 77 0 0 chr20_random 274501 274566 -551607 + AT_rich Low_complexity Low_complexity 1 65 0 741 182 176 6 chr20_random 274708 274878 -551295 - AluSg/x SINE Alu -27 282 84 1119 188 100 52 chr20_random 274878 275208 -550965 + MER119 DNA MER1_type 75 420 -163 1518 239 86 42 chr20_random 275208 275756 -550417 - L1ME1 LINE L1 -76 6090 5519 516 331 43 0 chr20_random 476505 476689 -349484 - HERVL LTR ERVL -3191 2463 2272 490 326 87 35 chr20_random 478000 478347 -347826 + L2 LINE L2 2451 2815 -499 234 274 20 14 chr20_random 479088 479234 -346939 + GA-rich Low_complexity Low_complexity 1 147 0 1519 218 95 24 chr20_random 479258 479955 -346218 - L1M4 LINE L1 -4994 1548 820 328 268 39 21 chr20_random 480137 480289 -345884 - L1M4 LINE L1 -5717 929 553 259 338 13 0 chr20_random 480628 480779 -345394 - L1M4 LINE L1 -6382 160 8 1781 205 85 15 chr20_random 480833 481257 -344916 - MLT1C LTR MaLR 0 467 4 631 251 114 18 chr20_random 481260 481654 -344519 - L1MEc LINE L1 -3688 2694 2299 2136 113 0 0 chr20_random 482067 482350 -343823 - AluY SINE Alu -28 283 1 560 299 38 22 chr20_random 482405 482723 -343450 - L1MEc LINE L1 -4544 1840 1518 1256 221 161 36 chr20_random 482724 483172 -343001 + L1MB5 LINE L1 5662 6165 -9 226 253 179 50 chr20_random 483635 483932 -342241 + L1MCc LINE L1 -461 4294967169 -6035 1359 248 3 7 chr20_random 484002 484296 -341877 + MLT1A1 LTR MaLR 73 365 0 438 295 17 32 chr20_random 484512 484705 -341468 + L1MCc LINE L1 1253 1624 -4983 843 257 48 19 chr20_random 484745 485122 -341051 + L1MCc LINE L1 2530 2917 -3509 721 200 15 12 chr20_random 485220 485716 -340457 + CT-rich Low_complexity Low_complexity 1 497 0 1205 165 4 0 chr20_random 485762 496036 -330137 + ALR/Alpha Satellite centromeric 1 10313 -9 1242 163 3 1 chr20_random 496047 504006 -322167 + ALR/Alpha Satellite centromeric 1 7973 -61 21 0 0 0 chr20_random 504319 504340 -321833 + AT_rich Low_complexity Low_complexity 1 21 0 2128 113 3 3 chr20_random 504417 504718 -321455 - AluSx SINE Alu -11 301 1 195 139 0 0 chr20_random 504755 504791 -321382 + (TC)n Simple_repeat Simple_repeat 1 36 0 491 283 92 92 chr20_random 504987 505802 -320371 - L1MEd LINE L1 -3311 3071 2270 2288 97 0 0 chr20_random 505886 506186 -319987 + AluSg SINE Alu 1 300 -10 262 303 99 23 chr20_random 506638 507016 -319157 - L1MEd LINE L1 -4867 1505 1174 21 0 0 0 chr20_random 507072 507093 -319080 + AT_rich Low_complexity Low_complexity 1 21 0 331 294 43 0 chr20_random 507290 507382 -318791 - L1MEd LINE L1 -5493 879 784 239 308 113 38 chr20_random 509540 509673 -316500 - LTR16C LTR ERVL -104 387 245 21 36 0 0 chr20_random 511311 511339 -314834 + AT_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr20_random 512018 512049 -314124 + AT_rich Low_complexity Low_complexity 1 31 0 211 309 25 0 chr20_random 512245 512326 -313847 + (CATATA)n Simple_repeat Simple_repeat 5 87 0 21 0 0 0 chr20_random 512520 512541 -313632 + AT_rich Low_complexity Low_complexity 1 21 0 1605 209 24 0 chr20_random 512593 512932 -313241 + MER7A DNA MER2_type 2 346 0 550 265 118 62 chr20_random 513558 513838 -312335 - MER77 LTR ERV1 -6 599 323 244 221 58 0 chr20_random 513895 513981 -312192 + L1MB7 LINE L1 3061 3151 -2995 4351 260 74 17 chr20_random 514018 515795 -310378 + L1MB7 LINE L1 3569 5445 -729 2381 221 42 7 chr20_random 515812 516413 -309760 + L1MB7 LINE L1 5563 6184 0 334 383 50 0 chr20_random 516474 516761 -309412 - L2 LINE L2 -266 3047 2748 201 304 49 97 chr20_random 516782 517029 -309144 + L3 LINE CR1 760 994 -583 544 191 0 0 chr20_random 517288 517377 -308796 - AluSc SINE Alu -69 240 152 3820 187 55 9 chr20_random 517384 518453 -307720 - L1MB7 LINE L1 -76 6108 4997 655 284 122 31 chr20_random 518612 519389 -306784 - L1MEd LINE L1 -4576 1820 969 229 281 94 62 chr20_random 519473 519601 -306572 + MIR SINE MIR 112 243 -19 2114 104 10 10 chr20_random 519867 520175 -305998 + AluY SINE Alu 1 308 -3 218 294 0 0 chr20_random 521659 521727 -304446 + (TG)n Simple_repeat Simple_repeat 2 69 0 582 121 8 73 chr20_random 523148 523399 -302774 + (ATGGTG)n Simple_repeat Simple_repeat 1 234 0 294 281 0 0 chr20_random 523364 523528 -302645 + (ATG)n Simple_repeat Simple_repeat 1 164 0 * 443 261 81 24 chr20_random 523537 523580 -302593 + L1ME LINE L1 5575 5614 -507 602 246 0 0 chr20_random 523580 523706 -302467 - FLAM_A SINE Alu -7 126 1 443 261 81 24 chr20_random 523706 523873 -302300 + L1ME LINE L1 5614 5797 -324 498 273 31 0 chr20_random 524020 524148 -302025 + L2 LINE L2 3180 3311 -2 286 267 165 81 chr20_random 524299 524535 -301638 + MLT1L LTR MaLR 135 390 -225 25 31 0 0 chr20_random 524864 524896 -301277 + AT_rich Low_complexity Low_complexity 1 32 0 294 330 37 11 chr20_random 525932 526108 -300065 - MIR SINE MIR -50 212 33 382 273 23 23 chr20_random 526444 526576 -299597 - L2 LINE L2 -214 3058 2927 225 324 198 0 chr20_random 526652 526763 -299410 - MER5A DNA MER1_type -2 187 55 252 0 0 0 chr20_random 527003 527031 -299142 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 681 184 9 0 chr20_random 527031 527145 -299028 - FLAM_C SINE Alu -22 121 7 459 278 8 8 chr20_random 527147 527273 -298900 + L2 LINE L2 3133 3258 -55 544 103 0 0 chr20_random 527757 527835 -298338 + AluSc SINE Alu 221 298 -11 347 280 156 33 chr20_random 528260 528535 -297638 + L2 LINE L2 213 521 -2793 2278 166 35 115 chr20_random 528538 529147 -297026 + MER7C DNA MER2_type 1 560 -42 1209 281 144 9 chr20_random 529200 529837 -296336 + L2 LINE L2 599 1321 -1993 437 260 16 16 chr20_random 529853 529976 -296197 - MIR SINE MIR -47 215 93 587 303 61 0 chr20_random 530015 530246 -295927 + L2 LINE L2 1305 1549 -1765 438 316 71 0 chr20_random 530332 530487 -295686 + L2 LINE L2 3139 3304 -9 353 330 55 0 chr20_random 530498 530607 -295566 - L2 LINE L2 -36 3236 3122 236 337 53 0 chr20_random 530791 530886 -295287 + MIR SINE MIR 51 150 -58 230 250 113 0 chr20_random 531197 531277 -294896 - L1ME LINE L1 -333 5829 5741 336 264 38 28 chr20_random 535275 535381 -290792 - L1MCa LINE L1 -4325 2101 1995 225 0 0 0 chr20_random 536736 536761 -289412 + (A)n Simple_repeat Simple_repeat 1 25 0 823 279 79 9 chr20_random 538088 538544 -287629 - L1M4 LINE L1 -3412 2734 2247 37 62 0 0 chr20_random 538545 538610 -287563 + AT_rich Low_complexity Low_complexity 1 65 0 195 100 0 0 chr20_random 538721 538751 -287422 + (TG)n Simple_repeat Simple_repeat 2 31 0 764 152 219 6 chr20_random 538752 538916 -287257 - AluSg/x SINE Alu -27 282 84 1111 206 88 39 chr20_random 538916 539246 -286927 + MER119 DNA MER1_type 75 420 -163 2017 248 80 44 chr20_random 539262 540299 -285874 - L1ME1 LINE L1 -94 6072 4997 284 316 11 0 chr20_random 540331 540426 -285747 - MLT1K LTR MaLR -114 474 379 1001 135 58 10 chr20_random 541541 541748 -284425 + MER33 DNA MER1_type 1 217 -107 1206 261 125 40 chr20_random 541769 542240 -283933 + L1MC4a LINE L1 7198 7708 -100 602 290 61 20 chr20_random 542244 542537 -283636 + HERVL LTR ERVL 4077 4381 -1273 338 202 0 19 chr20_random 542853 542957 -283216 + (ATG)n Simple_repeat Simple_repeat 3 104 0 702 211 0 0 chr20_random 542989 543169 -283004 + (ATG)n Simple_repeat Simple_repeat 1 180 0 390 208 0 51 chr20_random 543198 543376 -282797 + (ATGGTG)n Simple_repeat Simple_repeat 1 169 0 181 250 23 0 chr20_random 543699 543743 -282430 - MIR SINE MIR -121 141 97 408 218 64 27 chr20_random 543767 543877 -282296 - MIR SINE MIR -13 249 136 2623 176 16 4 chr20_random 543879 544368 -281805 - L1MB2 LINE L1 -7 6164 5670 378 0 0 0 chr20_random 544568 544610 -281563 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 523 16 0 0 chr20_random 544610 544672 -281501 - L1PA3 LINE L1 -10 6145 6084 649 289 64 5 chr20_random 544992 545210 -280963 - MIR SINE MIR -1 261 31 224 328 106 61 chr20_random 546170 546530 -279643 + L2 LINE L2 2888 3263 -9 311 318 19 0 chr20_random 546761 546868 -279305 - L2 LINE L2 -18 3254 3146 2036 135 0 6 chr20_random 547568 547880 -278293 - AluSg SINE Alu 0 310 1 834 314 55 25 chr20_random 548078 548298 -277875 - SST1 Satellite centromeric -1077 486 274 261 57 0 0 chr20_random 548298 548333 -277840 + (CCCCAG)n Simple_repeat Simple_repeat 5 39 0 834 314 55 25 chr20_random 548333 548584 -277589 - SST1 Satellite centromeric -1289 274 1 186 103 0 0 chr20_random 549355 549384 -276789 + (CA)n Simple_repeat Simple_repeat 2 30 0 227 200 18 0 chr20_random 549388 549443 -276730 + GA-rich Low_complexity Low_complexity 1 56 0 417 66 0 0 chr20_random 549448 549509 -276664 + (CA)n Simple_repeat Simple_repeat 2 62 0 959 220 54 67 chr20_random 549513 549918 -276255 - SST1 Satellite centromeric -1 1562 1163 1888 287 29 30 chr20_random 550146 550965 -275208 - SST1 Satellite centromeric -745 818 1 258 106 0 0 chr20_random 551765 551812 -274361 + (CA)n Simple_repeat Simple_repeat 2 48 0 2590 276 55 60 chr20_random 551816 553386 -272787 - SST1 Satellite centromeric -1 1562 1 249 163 0 0 chr20_random 554083 554132 -272041 + (CA)n Simple_repeat Simple_repeat 2 50 0 206 237 17 0 chr20_random 554136 554195 -271978 + GA-rich Low_complexity Low_complexity 1 60 0 1190 189 57 111 chr20_random 554415 554801 -271372 - MLT1A1 LTR MaLR 0 365 1 706 207 56 89 chr20_random 555169 555492 -270681 - L1P4 LINE L1 -364 5804 5472 2544 97 3 43 chr20_random 555492 555862 -270311 + THE1A LTR MaLR 1 355 0 10959 119 3 11 chr20_random 555862 557454 -268719 + THE1A-int LTR MaLR 1 1580 0 2140 146 3 22 chr20_random 557454 557816 -268357 + THE1A LTR MaLR 1 355 0 706 207 56 89 chr20_random 557816 557843 -268330 - L1P4 LINE L1 -693 5475 5470 553 277 109 38 chr20_random 557986 558247 -267926 - L1MC/D LINE L1 -747 5423 5182 1541 151 110 7 chr20_random 558247 558519 -267654 - AluSx SINE Alu -2 300 1 553 277 109 38 chr20_random 558519 558994 -267179 - L1MC/D LINE L1 -988 5182 4657 429 20 0 0 chr20_random 558995 559045 -267128 + (CA)n Simple_repeat Simple_repeat 1 50 0 312 27 0 0 chr20_random 559044 559081 -267092 + (TA)n Simple_repeat Simple_repeat 2 38 0 * 270 0 0 0 chr20_random 559080 559110 -267063 + (GA)n Simple_repeat Simple_repeat 2 31 0 * 1423 174 0 45 chr20_random 559110 559397 -266776 - AluJo SINE Alu -38 274 1 2001 121 0 0 chr20_random 560364 560666 -265507 - AluSq SINE Alu 0 302 1 307 297 30 10 chr20_random 560713 560814 -265359 - HAL1b LINE L1 -10 1338 1236 1790 150 3 3 chr20_random 560906 561192 -264981 - AluSq SINE Alu -25 288 3 838 174 0 0 chr20_random 561415 561547 -264626 - FLAM_C SINE Alu -1 132 1 1341 204 3 36 chr20_random 562006 562315 -263858 + AluJb SINE Alu 1 299 -13 4323 138 44 4 chr20_random 562317 562998 -263175 + Tigger1 DNA MER2_type 1066 1773 -645 1960 136 7 0 chr20_random 562998 563292 -262881 - AluSp SINE Alu -17 296 1 752 240 36 20 chr20_random 563348 563544 -262629 + MER115 DNA AcHobo 445 643 -50 379 165 23 28 chr20_random 563727 563903 -262270 + (TATAA)n Simple_repeat Simple_repeat 5 179 0 3770 140 1 48 chr20_random 563908 564417 -261756 + Tigger1 DNA MER2_type 1801 2275 -143 1873 126 39 0 chr20_random 564417 564702 -261471 - AluSx SINE Alu -15 297 2 3770 140 1 48 chr20_random 564702 564840 -261333 + Tigger1 DNA MER2_type 2275 2418 0 469 316 109 33 chr20_random 564843 565210 -260963 - LTR16C LTR ERVL -17 474 80 1252 272 105 26 chr20_random 565323 565869 -260304 + MER115 DNA AcHobo 16 643 -50 1584 135 21 18 chr20_random 566281 566562 -259611 - L1MA4 LINE L1 -1 6299 6018 415 226 128 108 chr20_random 566882 567086 -259087 - MIR SINE MIR -11 251 44 1788 140 24 7 chr20_random 567186 567478 -258695 + AluSx SINE Alu 1 297 -15 315 324 29 41 chr20_random 567575 567745 -258428 - L2 LINE L2 -15 3298 3131 467 326 65 28 chr20_random 568226 568441 -257732 - MIR SINE MIR -12 250 28 374 346 46 7 chr20_random 568845 568998 -257175 + L1 LINE L1 3707 3865 -2281 611 89 0 11 chr20_random 569096 569186 -256987 - L1PA16 LINE L1 -9 6157 6069 688 197 7 44 chr20_random 569424 569561 -256612 + FLAM_A SINE Alu 1 132 -1 1524 206 24 9 chr20_random 569562 569903 -256270 - MER93a LTR ERV1 -7 395 4 201 74 0 0 chr20_random 570034 570061 -256112 + (CTTAT)n Simple_repeat Simple_repeat 5 31 0 567 212 0 18 chr20_random 570413 570526 -255647 - AluSp SINE Alu -101 212 102 1787 145 3 7 chr20_random 570618 570908 -255265 + AluJb SINE Alu 1 289 -23 1984 128 7 3 chr20_random 571753 572049 -254124 + AluSq SINE Alu 5 301 -12 474 325 62 18 chr20_random 572181 572519 -253654 + L1ME3A LINE L1 5421 5773 -389 42 48 0 0 chr20_random 572526 572589 -253584 + AT_rich Low_complexity Low_complexity 1 63 0 1739 144 0 17 chr20_random 572589 572880 -253293 - AluSx SINE Alu -24 288 3 1853 136 13 41 chr20_random 572882 573055 -253118 - AluSx SINE Alu -5 307 146 1741 151 0 7 chr20_random 573055 573339 -252834 - AluSc SINE Alu -19 290 9 1853 136 13 41 chr20_random 573339 573481 -252692 - AluSx SINE Alu -166 146 1 252 237 54 21 chr20_random 573521 573614 -252559 + L1ME3A LINE L1 5852 5947 -223 1368 132 4 56 chr20_random 573661 573911 -252262 + AluSg/x SINE Alu 65 301 -11 1277 152 184 12 chr20_random 574261 574517 -251656 + AluSq SINE Alu 2 301 -2 3348 181 39 10 chr20_random 574775 575462 -250711 + L1MC2 LINE L1 5616 6322 -22 1941 145 0 0 chr20_random 575471 575781 -250392 - AluY SINE Alu -1 310 1 1001 161 0 0 chr20_random 575784 575949 -250224 - AluJb SINE Alu -19 293 137 * 1263 229 23 8 chr20_random 575946 576262 -249911 + L1MC/D LINE L1 5370 5626 -718 25 51 0 0 chr20_random 576262 576301 -249872 + AT_rich Low_complexity Low_complexity 1 39 0 27 0 0 0 chr20_random 576486 576513 -249660 + AT_rich Low_complexity Low_complexity 1 27 0 1043 193 9 37 chr20_random 576783 577001 -249172 + AluSx SINE Alu 1 212 -100 256 159 0 0 chr20_random 577010 577054 -249119 + Charlie1 DNA MER1_type 2718 2761 0 526 230 43 14 chr20_random 577062 577201 -248972 - L2 LINE L2 -4 3309 3167 1030 124 0 0 chr20_random 577222 577359 -248814 + AluSq/x SINE Alu 3 139 -173 1999 123 3 36 chr20_random 577361 577670 -248503 + AluSx SINE Alu 1 299 -13 771 140 0 37 chr20_random 577892 578078 -248095 - AluSp/q SINE Alu 0 313 172 1999 135 0 0 chr20_random 578128 578410 -247763 + AluSg SINE Alu 29 310 0 228 323 77 8 chr20_random 578449 578579 -247594 + HAL1 LINE L1 2219 2357 -150 2363 219 115 6 chr20_random 578783 579303 -246870 - MER77 LTR ERV1 -28 577 1 1863 180 3 0 chr20_random 579415 579715 -246458 - AluJb SINE Alu -11 301 1 267 209 38 38 chr20_random 579715 579748 -246425 + (TATATG)n Simple_repeat Simple_repeat 4 36 -72 1814 171 7 0 chr20_random 579748 580047 -246126 + AluSx SINE Alu 1 301 -11 267 209 38 38 chr20_random 580047 580118 -246055 + (TATATG)n Simple_repeat Simple_repeat 35 108 0 1624 182 19 22 chr20_random 580418 580731 -245442 - MER44D DNA MER2_type -1 604 421 1777 171 3 31 chr20_random 580732 581140 -245033 - AluSx SINE Alu 0 399 1 304 236 65 16 chr20_random 581193 581316 -244857 + HAL1b LINE L1 1215 1343 -5 1803 169 11 0 chr20_random 581451 581730 -244443 + AluSx SINE Alu 3 284 -28 1834 151 7 0 chr20_random 581820 582098 -244075 + AluSx SINE Alu 1 280 -32 198 0 0 0 chr20_random 582098 582120 -244053 + (CAAA)n Simple_repeat Simple_repeat 1 22 0 198 0 0 0 chr20_random 583690 583712 -242461 + (TG)n Simple_repeat Simple_repeat 1 22 0 1603 176 14 21 chr20_random 584052 584342 -241831 - AluJb SINE Alu -20 292 5 481 175 0 3 chr20_random 584472 584706 -241467 + AluSx SINE Alu 1 308 -4 1489 174 48 19 chr20_random 584786 585102 -241071 - L1MB8 LINE L1 0 6178 5854 847 217 66 66 chr20_random 585542 585814 -240359 - PABL_B LTR ERV1 -42 625 354 399 241 24 0 chr20_random 585851 585934 -240239 - MER77 LTR ERV1 -520 85 1 273 277 24 0 chr20_random 585936 586019 -240154 + L1ME LINE L1 5492 5576 -545 1758 184 3 0 chr20_random 586055 586349 -239824 - AluJb SINE Alu -17 295 1 237 237 40 0 chr20_random 586349 586382 -239791 + (TA)n Simple_repeat Simple_repeat 1 31 -405 1859 164 3 0 chr20_random 586382 586680 -239493 + AluSx SINE Alu 1 299 -13 237 237 40 0 chr20_random 586680 586769 -239404 + (TA)n Simple_repeat Simple_repeat 31 436 0 1531 188 19 25 chr20_random 587049 587363 -238810 - MER44D DNA MER2_type -1 604 421 1732 186 3 0 chr20_random 587363 587781 -238392 - AluSx SINE Alu 0 432 14 250 293 57 8 chr20_random 587848 587971 -238202 + HAL1b LINE L1 1215 1343 -5 575 181 48 0 chr20_random 588092 588197 -237976 + AluSq/x SINE Alu 2 111 -201 1812 156 7 7 chr20_random 588227 588515 -237658 - AluSx SINE Alu -20 292 5 562 154 0 29 chr20_random 588621 588751 -237422 - AluSg/x SINE Alu 0 309 203 1219 217 16 27 chr20_random 590707 590965 -235208 - AluJb SINE Alu -57 255 1 562 134 4 7 chr20_random 591092 591330 -234843 + AluSx SINE Alu 1 312 0 1499 180 52 10 chr20_random 591408 591714 -234459 - L1MB8 LINE L1 -9 6169 5851 1314 173 9 0 chr20_random 591828 592053 -234120 - AluSg/x SINE Alu -7 303 77 922 132 13 57 chr20_random 592054 592073 -234100 - AluJo SINE Alu -160 152 134 1793 163 0 52 chr20_random 592073 592380 -233793 - AluJb SINE Alu -21 291 1 922 132 13 57 chr20_random 592380 592519 -233654 - AluJo SINE Alu -178 134 1 455 204 0 39 chr20_random 592519 592622 -233551 - MER33 DNA MER1_type -189 135 37 2076 137 0 0 chr20_random 592962 593247 -232926 - AluSx SINE Alu -17 295 11 2195 122 10 3 chr20_random 593383 593694 -232479 - AluSq SINE Alu 0 313 1 906 157 7 0 chr20_random 593697 593837 -232336 - AluY SINE Alu -170 141 1 220 133 22 22 chr20_random 594817 594862 -231311 + GA-rich Low_complexity Low_complexity 2 46 0 1228 180 127 11 chr20_random 594906 595189 -230984 - SST1 Satellite centromeric -10 1553 1238 828 148 0 15 chr20_random 595195 595330 -230843 + AluSg/x SINE Alu 157 289 -23 7228 164 30 19 chr20_random 595415 596807 -229366 - SST1 Satellite centromeric -157 1406 1 1314 306 63 36 chr20_random 597360 598413 -227760 - SST1 Satellite centromeric -1315 1081 1 189 121 0 0 chr20_random 599128 599161 -227012 + (CA)n Simple_repeat Simple_repeat 1 33 0 245 196 18 0 chr20_random 599162 599218 -226955 + GA-rich Low_complexity Low_complexity 1 57 0 192 77 0 0 chr20_random 599218 599244 -226929 + (CA)n Simple_repeat Simple_repeat 2 27 0 1937 277 53 48 chr20_random 599259 600395 -225778 - SST1 Satellite centromeric -7 1556 415 615 239 59 18 chr20_random 600410 600632 -225541 - SST1 Satellite centromeric -1332 231 1 233 226 16 0 chr20_random 601365 601427 -224746 + GA-rich Low_complexity Low_complexity 1 63 0 261 0 0 0 chr20_random 601427 601456 -224717 + (CA)n Simple_repeat Simple_repeat 2 30 0 2940 264 69 50 chr20_random 601458 602736 -223437 - SST1 Satellite centromeric -1 1562 249 225 0 0 0 chr20_random 602736 602761 -223412 + (CCCCAG)n Simple_repeat Simple_repeat 3 27 0 2940 264 69 50 chr20_random 602761 603015 -223158 - SST1 Satellite centromeric -1314 249 1 1089 198 10 5 chr20_random 603306 607203 -218970 + ALR/Alpha Satellite centromeric 1 3916 -82 267 181 0 0 chr20_random 607821 607893 -218280 + (CA)n Simple_repeat Simple_repeat 1 72 0 550 292 112 74 chr20_random 607919 609362 -216811 - SST1 Satellite centromeric -27 1536 40 312 48 0 0 chr20_random 610366 610408 -215765 + (CA)n Simple_repeat Simple_repeat 1 42 0 487 264 87 61 chr20_random 610796 611377 -214796 - SST1 Satellite centromeric -891 596 1 958 196 8 10 chr20_random 611487 616864 -209309 + ALR/Alpha Satellite centromeric 1 5367 -7 1006 207 10 5 chr20_random 616875 617269 -208904 + ALR/Alpha Satellite centromeric 1 392 -3043 2186 82 55 0 chr20_random 617269 617560 -208613 + AluY SINE Alu 1 307 -4 1006 207 10 5 chr20_random 617560 620277 -205896 + ALR/Alpha Satellite centromeric 392 3417 -18 226 37 0 0 chr20_random 620277 620304 -205869 - L1M LINE L1 -2585 5410 5384 978 176 0 0 chr20_random 620324 620477 -205696 + AluJb SINE Alu 141 293 -19 2108 127 0 7 chr20_random 620480 620779 -205394 + AluY SINE Alu 1 297 -14 5068 170 28 12 chr20_random 620785 621751 -204422 - L1MC2 LINE L1 -3 6341 5361 199 344 78 19 chr20_random 622264 622418 -203755 - MIR SINE MIR -88 174 12 975 80 0 0 chr20_random 623075 623226 -202947 + (TA)n Simple_repeat Simple_repeat 2 152 0 1929 137 30 17 chr20_random 623226 623525 -202648 - AluSg SINE Alu -7 303 1 835 266 47 16 chr20_random 623540 623860 -202313 - L1MA9 LINE L1 -30 6282 5953 309 130 0 22 chr20_random 623886 623932 -202241 - Alu SINE Alu -254 46 2 1701 110 4 35 chr20_random 624289 624544 -201629 - AluSg/x SINE Alu -1 311 65 457 290 115 46 chr20_random 624588 624724 -201449 - L1ME3 LINE L1 -212 5950 5825 1959 138 3 39 chr20_random 624724 624866 -201307 + AluSx SINE Alu 1 146 -166 1830 153 7 0 chr20_random 624866 625147 -201026 + AluY SINE Alu 9 291 -20 1959 138 3 39 chr20_random 625147 625315 -200858 + AluSx SINE Alu 146 300 -12 2004 145 3 0 chr20_random 625315 625618 -200555 + AluSx SINE Alu 1 304 -8 457 290 115 46 chr20_random 625618 625976 -200197 - L1ME3 LINE L1 -336 5826 5421 1962 142 10 3 chr20_random 626105 626400 -199773 - AluSq SINE Alu -16 297 1 949 196 0 0 chr20_random 626524 626677 -199496 + AluSg/x SINE Alu 130 304 0 199 0 0 0 chr20_random 626677 626699 -199474 + (CAAAA)n Simple_repeat Simple_repeat 2 180 0 1325 82 5 16 chr20_random 626857 627041 -199132 + AluY SINE Alu 113 294 -17 1418 178 4 8 chr20_random 627056 627302 -198871 + L1M2 LINE L1 5546 5792 -499 348 24 0 0 chr20_random 627302 627343 -198830 + (CA)n Simple_repeat Simple_repeat 2 42 0 1418 178 4 8 chr20_random 627343 627360 -198813 + L1M2 LINE L1 5792 5808 -483 203 0 37 0 chr20_random 627363 627390 -198783 + (TTTTA)n Simple_repeat Simple_repeat 2 29 0 2060 99 4 0 chr20_random 627400 627672 -198501 - AluSp SINE Alu -37 276 4 1992 152 0 0 chr20_random 627688 627985 -198188 - AluSq SINE Alu -16 297 1 2082 109 0 0 chr20_random 628549 628834 -197339 + AluY SINE Alu 1 285 -26 36 23 0 0 chr20_random 628834 628877 -197296 + AT_rich Low_complexity Low_complexity 1 43 0 3053 161 11 57 chr20_random 628877 629135 -197038 - MER57B-int LTR ERV1 -6998 539 271 1911 146 0 0 chr20_random 629135 629442 -196731 + AluSx SINE Alu 4 310 0 3053 161 11 57 chr20_random 629442 629747 -196426 - MER57B-int LTR ERV1 -7266 271 1 2739 137 12 2 chr20_random 629747 630177 -195996 - MER57B LTR ERV1 0 434 1 1057 102 0 19 chr20_random 630177 630334 -195839 + MER4E LTR ERV1 613 766 0 1222 230 14 11 chr20_random 630334 630621 -195552 + L1ME2 LINE L1 5802 6089 -75 189 0 0 0 chr20_random 630658 630679 -195494 + (TAAAA)n Simple_repeat Simple_repeat 5 25 0 355 317 101 25 chr20_random 631051 631250 -194923 - LTR33 LTR ERVL -1 520 307 759 322 126 12 chr20_random 632036 632520 -193653 - L2 LINE L2 -206 3107 2554 241 252 63 54 chr20_random 632694 632805 -193368 + MIR SINE MIR 77 188 -74 32 0 0 0 chr20_random 634124 634156 -192017 + AT_rich Low_complexity Low_complexity 1 32 0 2603 245 75 18 chr20_random 634156 634955 -191218 + L1ME1 LINE L1 5316 6160 -6 379 294 65 47 chr20_random 635039 635533 -190640 + L1ME3A LINE L1 3345 3847 -2299 * 411 218 81 92 chr20_random 635528 635622 -190551 + L1MC4 LINE L1 7759 7853 -189 1958 145 76 17 chr20_random 635622 635966 -190207 - THE1B LTR MaLR 0 364 1 411 218 81 92 chr20_random 635966 636142 -190031 + L1MC4 LINE L1 7853 8026 -16 884 262 103 13 chr20_random 636593 637070 -189103 + L1ME3A LINE L1 4298 4817 -1329 1457 293 108 23 chr20_random 637076 638216 -187957 + L1ME3A LINE L1 4931 6166 -4 21 0 0 0 chr20_random 639184 639205 -186968 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr20_random 639272 639301 -186872 + AT_rich Low_complexity Low_complexity 1 29 0 301 383 7 0 chr20_random 639341 639482 -186691 - L1MEc LINE L1 -3325 2890 2749 417 319 101 35 chr20_random 639939 640337 -185836 - LTR33 LTR ERVL -67 454 31 1886 312 27 15 chr20_random 641111 641858 -184315 - ERVL LTR ERVL -891 4763 4000 444 348 82 20 chr20_random 641895 642491 -183682 - ERVL LTR ERVL -2101 3553 2882 733 142 15 37 chr20_random 642548 642682 -183491 + FLAM_C SINE Alu 1 131 -2 615 311 35 28 chr20_random 642720 643135 -183038 - LTR33 LTR ERVL -57 464 16 403 311 28 33 chr20_random 643239 643451 -182722 - L1MEc LINE L1 -5520 876 666 2787 3 0 0 chr20_random 645384 645688 -180485 + AluYb8 SINE Alu 1 304 -14 21 0 0 0 chr20_random 645962 645983 -180190 + AT_rich Low_complexity Low_complexity 1 21 0 500 340 111 16 chr20_random 646258 646637 -179536 + L3 LINE CR1 1150 1564 -13 242 375 49 7 chr20_random 646791 646935 -179238 + MIR SINE MIR 46 195 -67 379 331 90 55 chr20_random 647439 648399 -177774 + L1MEc LINE L1 22 1014 -5382 552 312 27 15 chr20_random 648426 648756 -177417 + L1MEc LINE L1 1451 1784 -4612 11867 42 2 6 chr20_random 649479 651690 -174483 + L1PA5 LINE L1 3928 6134 -20 286 241 10 32 chr20_random 651799 651912 -174261 + L1ME2 LINE L1 5701 5808 -356 753 247 89 23 chr20_random 651928 652187 -173986 + L1ME2 LINE L1 5888 6163 -1 1947 241 41 51 chr20_random 652427 653058 -173115 + MLT1E2 LTR MaLR 1 625 -1 1341 152 134 38 chr20_random 653189 653531 -172642 - THE1C LTR MaLR 0 375 1 429 335 153 0 chr20_random 655085 655288 -170885 - MIR SINE MIR -4 258 25 1043 212 20 43 chr20_random 655533 655788 -170385 + MER96B DNA MER1_type? 1 249 -168 437 338 76 31 chr20_random 656650 656940 -169233 + HAL1b LINE L1 631 933 -415 1664 157 48 53 chr20_random 657527 657708 -168465 + THE1C LTR MaLR 1 181 -194 1954 141 3 7 chr20_random 657708 657998 -168175 + AluSx SINE Alu 7 295 -17 1664 157 48 53 chr20_random 657998 658193 -167980 + THE1C LTR MaLR 181 375 0 1688 149 140 3 chr20_random 658279 658601 -167572 - MER47A DNA MER2_type 0 366 1 195 100 0 0 chr20_random 658620 658650 -167523 + (CA)n Simple_repeat Simple_repeat 2 31 0 234 241 0 0 chr20_random 658651 658705 -167468 + GA-rich Low_complexity Low_complexity 1 54 0 319 261 80 50 chr20_random 658798 658997 -167176 + L1ME3A LINE L1 4132 4336 -1810 335 265 0 0 chr20_random 659055 659123 -167050 - MER96B DNA MER1_type? -107 68 1 488 321 6 0 chr20_random 659134 659299 -166874 + L1ME3A LINE L1 5401 5566 -604 261 241 0 0 chr20_random 659304 659358 -166815 + L1ME3A LINE L1 5664 5717 -453 410 226 0 11 chr20_random 659388 659481 -166692 + L1ME3A LINE L1 5794 5885 -285 1243 221 128 35 chr20_random 659495 659852 -166321 - MLT1D LTR MaLR 0 505 94 2027 123 3 16 chr20_random 659852 660168 -166005 - AluSx SINE Alu 0 312 1 1243 221 128 35 chr20_random 660168 660272 -165901 - MLT1D LTR MaLR -411 94 1 22 0 0 0 chr20_random 660544 660566 -165607 + AT_rich Low_complexity Low_complexity 1 22 0 312 234 36 45 chr20_random 660599 660710 -165463 + HAL1b LINE L1 1094 1203 -145 237 148 182 45 chr20_random 660805 660893 -165280 - L1ME4a LINE L1 -41 6080 5981 * 296 177 106 53 chr20_random 660868 660981 -165192 + HAL1b LINE L1 1228 1346 -2 315 285 95 95 chr20_random 661053 661274 -164899 - MIR SINE MIR -12 250 30 21 57 0 0 chr20_random 662690 662725 -163448 + AT_rich Low_complexity Low_complexity 1 35 0 1762 68 17 4 chr20_random 663030 663265 -162908 + AluY SINE Alu 65 302 -9 406 198 12 0 chr20_random 664337 664418 -161755 + MER94 DNA DNA 4 85 -49 406 335 103 11 chr20_random 664590 664862 -161311 - L1ME4a LINE L1 -181 5940 5644 1359 198 45 23 chr20_random 665021 665329 -160844 - MLT1A2 LTR MaLR 0 374 60 24 32 0 0 chr20_random 667156 667187 -158986 + AT_rich Low_complexity Low_complexity 1 31 0 3055 148 83 24 chr20_random 667945 668716 -157457 + MER21A LTR ERV1 1 931 0 28 29 0 0 chr20_random 669359 669394 -156779 + AT_rich Low_complexity Low_complexity 1 35 0 836 207 11 17 chr20_random 670022 670196 -155977 + MER41D LTR ERV1 320 492 -65 809 266 39 67 chr20_random 720204 720562 -105611 - HERVL-B1 LTR ERVL -5278 486 125 2357 92 3 0 chr20_random 720562 720865 -105308 + AluSx SINE Alu 1 304 -8 809 266 39 67 chr20_random 720865 720987 -105186 - HERVL-B1 LTR ERVL -5639 125 1 321 239 37 55 chr20_random 720987 721096 -105077 - MLT2B1 LTR ERVL 0 520 414 724 177 111 0 chr20_random 721642 721840 -104333 - L1MCa LINE L1 -3996 2430 2211 284 157 0 0 chr20_random 721836 721906 -104267 + L1MCa LINE L1 1919 1988 -4438 * 515 231 32 72 chr20_random 721931 721947 -104226 + L1MCa LINE L1 1977 1992 -4434 1854 144 0 33 chr20_random 721947 722253 -103920 + AluSx SINE Alu 1 296 -16 515 231 32 72 chr20_random 722253 722487 -103686 + L1MCa LINE L1 1992 2217 -4209 487 306 150 20 chr20_random 722499 722793 -103380 - MLT1E LTR MaLR -259 334 3 240 248 220 18 chr20_random 722800 722909 -103264 - L1MC4 LINE L1 -421 7621 7491 37 0 0 0 chr20_random 723154 723191 -102982 + AT_rich Low_complexity Low_complexity 1 37 0 1774 218 132 25 chr20_random 723198 723622 -102551 - L1MC3 LINE L1 -23 7762 7262 1824 157 10 26 chr20_random 723622 723935 -102238 - AluJo SINE Alu -4 308 1 1774 218 132 25 chr20_random 723935 724069 -102104 - L1MC3 LINE L1 -523 7262 7144 361 244 6 77 chr20_random 724109 724265 -101908 - L1M4 LINE L1 -1453 4693 4549 1064 195 53 0 chr20_random 724621 724867 -101306 - L1MD3 LINE L1 -13 7982 7724 368 238 12 0 chr20_random 724957 725037 -101136 - MLT1E LTR MaLR -164 429 349 1285 245 86 11 chr20_random 725038 725515 -100658 + L1M4 LINE L1 3519 4031 -2115 1170 278 62 4 chr20_random 725513 725980 -100193 + L1M4 LINE L1 4781 5274 -872 * 1113 150 0 0 chr20_random 725985 726145 -100028 - AluSx SINE Alu -152 160 1 459 284 21 0 chr20_random 726245 726386 -99787 + L1MD3 LINE L1 7571 7714 -281 450 316 85 9 chr20_random 726496 726708 -99465 + L1MEc LINE L1 92 319 -6077 377 263 124 14 chr20_random 728037 728254 -97919 - L1MD3 LINE L1 0 7995 7755 1977 144 0 25 chr20_random 728439 728759 -97414 - AluSx SINE Alu 0 312 1 246 276 129 35 chr20_random 728762 728878 -97295 - HsTC2 DNA Tc2 -539 1359 1233 * 377 300 25 25 chr20_random 728875 728995 -97178 - HsTC2 DNA Tc2 -1744 154 35 1830 14 9 0 chr20_random 730274 730492 -95681 + L1PA3 LINE L1 5932 6151 -4 1016 193 61 71 chr20_random 730614 731076 -95097 + MER49-int LTR ERV1 3242 3698 -2900 950 222 26 27 chr20_random 731159 731577 -94596 + MER49-int LTR ERV1 3731 4183 -2148 272 182 20 141 chr20_random 731665 731764 -94409 + MER49-int LTR ERV1 3786 3872 -4248 21 0 0 0 chr20_random 731783 731804 -94369 + AT_rich Low_complexity Low_complexity 1 21 0 1751 105 4 8 chr20_random 731840 732088 -94085 - AluSc SINE Alu -18 291 45 670 202 101 18 chr20_random 732180 732348 -93825 + MER49-int LTR ERV1 5984 6165 -593 * 1469 219 60 19 chr20_random 732317 732682 -93491 + MER49-int LTR ERV1 6376 6755 -3 1820 203 32 23 chr20_random 732683 733392 -92781 + MER49 LTR ERV1 1 754 -169 382 358 0 0 chr20_random 733430 733553 -92620 + PABL_B-int LTR ERV1 6622 6744 -378 251 241 0 0 chr20_random 733556 733610 -92563 + HERVL66 LTR ERVL 3989 4042 -287 252 59 0 0 chr20_random 733629 733663 -92510 + (CA)n Simple_repeat Simple_repeat 2 35 0 314 273 68 78 chr20_random 734073 734468 -91705 + LTR38 LTR ERV1 1 391 -165 180 200 0 0 chr20_random 734776 734821 -91352 + (TATG)n Simple_repeat Simple_repeat 1 45 0 201 74 0 0 chr20_random 734999 735026 -91147 + (CA)n Simple_repeat Simple_repeat 2 28 0 317 170 20 20 chr20_random 736737 736837 -89336 + (TA)n Simple_repeat Simple_repeat 1 100 0 1175 278 51 63 chr20_random 737386 737875 -88298 + MLT1H LTR MaLR 67 549 0 321 275 104 86 chr20_random 737941 738221 -87952 - MLT1L LTR MaLR -145 470 186 619 324 131 25 chr20_random 738527 739015 -87158 - L2 LINE L2 -638 2676 2137 30 0 0 0 chr20_random 739190 739220 -86953 + AT_rich Low_complexity Low_complexity 1 30 0 934 231 34 8 chr20_random 741182 741446 -84727 + LTR37B LTR ERV1 173 443 -25 3515 135 128 25 chr20_random 741606 742318 -83855 - LTR1 LTR ERV1 0 785 1 198 342 8 58 chr20_random 744003 744123 -82050 - L2 LINE L2 -2 3311 3198 222 219 0 0 chr20_random 744442 744483 -81690 + (CATATA)n Simple_repeat Simple_repeat 2 42 0 250 227 42 67 chr20_random 746162 746281 -79892 - MIR3 SINE MIR -6 202 87 202 279 70 78 chr20_random 746756 746885 -79288 + L2 LINE L2 3145 3272 0 1991 127 28 0 chr20_random 747728 748019 -78154 + AluSx SINE Alu 2 300 -12 630 308 72 24 chr20_random 748128 748438 -77735 - L1MC/D LINE L1 -468 5653 5359 2185 118 3 0 chr20_random 748438 748743 -77430 - AluSp SINE Alu -5 308 3 2088 125 7 0 chr20_random 748745 749042 -77131 - AluSq SINE Alu -14 299 1 630 308 72 24 chr20_random 749042 749133 -77040 - L1MC/D LINE L1 -762 5359 5265 2221 112 3 0 chr20_random 749136 749478 -76695 - AluSp SINE Alu 0 343 1 443 255 108 25 chr20_random 749537 749694 -76479 + MIR SINE MIR 34 203 -59 278 228 8 94 chr20_random 750048 750175 -75998 - L1P LINE L1 -1130 5016 4901 * 436 233 129 77 chr20_random 750143 750508 -75665 - L1MC/D LINE L1 -1214 4932 4549 670 279 121 37 chr20_random 750693 751263 -74910 - L2 LINE L2 -104 3209 2588 387 0 0 0 chr20_random 751293 751336 -74837 + (TG)n Simple_repeat Simple_repeat 2 44 0 216 308 13 26 chr20_random 751740 751818 -74355 + MIR SINE MIR 184 260 -2 2006 141 0 16 chr20_random 751965 752140 -74033 - AluSx SINE Alu -4 308 139 2115 117 7 0 chr20_random 752140 752439 -73734 - AluSg SINE Alu -9 301 1 2006 141 0 16 chr20_random 752439 752576 -73597 - AluSx SINE Alu -173 139 1 1888 153 3 0 chr20_random 752776 753063 -73110 - AluSx SINE Alu -24 288 1 2004 132 0 10 chr20_random 753857 754152 -72021 - AluSc SINE Alu -17 292 1 2218 84 3 0 chr20_random 755592 755877 -70296 - AluSp SINE Alu -27 286 1 2134 91 0 24 chr20_random 755944 756241 -69932 - AluY SINE Alu -21 290 1 266 256 39 26 chr20_random 756243 756321 -69852 + L1MC4a LINE L1 5857 5935 -1873 275 308 98 8 chr20_random 756671 756804 -69369 + MIR3 SINE MIR 41 185 -23 22 35 0 0 chr20_random 756944 756973 -69200 + AT_rich Low_complexity Low_complexity 1 29 0 1877 115 49 3 chr20_random 756999 757286 -68887 - AluSg SINE Alu -10 300 1 1040 163 0 0 chr20_random 757305 757465 -68708 - AluJb SINE Alu -12 300 141 2289 84 7 0 chr20_random 757472 757771 -68402 - AluY SINE Alu -10 301 1 27 0 0 0 chr20_random 757778 757805 -68368 + AT_rich Low_complexity Low_complexity 1 27 0 189 424 11 11 chr20_random 760535 760627 -65546 + L2 LINE L2 3121 3212 -60 1246 293 119 6 chr20_random 761093 761623 -64550 - MLT1G LTR MaLR 0 590 1 201 167 0 0 chr20_random 762708 762744 -63429 + (TA)n Simple_repeat Simple_repeat 2 37 0 1955 151 3 0 chr20_random 762961 763265 -62908 - AluSx SINE Alu -7 305 1 2015 80 87 0 chr20_random 763345 763620 -62553 + AluY SINE Alu 1 299 -12 24 0 0 0 chr20_random 764673 764697 -61476 + AT_rich Low_complexity Low_complexity 1 24 0 2274 88 13 0 chr20_random 767361 767667 -58506 - AluSp SINE Alu -3 310 1 190 284 0 45 chr20_random 767702 767769 -58404 - MIR SINE MIR -35 227 164 8619 241 31 12 chr20_random 768609 771067 -55106 - L1 LINE L1 -1439 4707 2204 2220 101 0 10 chr20_random 771246 771553 -54620 + AluY SINE Alu 1 304 -7 1690 252 65 64 chr20_random 771663 772402 -53771 + MER63C DNA MER1_type 191 930 0 244 391 38 8 chr20_random 772514 772647 -53526 - MLT1K LTR MaLR -352 236 100 181 325 50 17 chr20_random 772769 772889 -53284 - MIR SINE MIR -14 248 125 306 119 153 0 chr20_random 772933 772992 -53181 - MADE1 DNA Mariner 0 80 13 423 169 0 0 chr20_random 774291 774362 -51811 + MER41D LTR ERV1 487 557 0 2069 307 169 17 chr20_random 774367 776113 -50060 - HAL1 LINE L1 -364 2143 133 1929 152 0 4 chr20_random 776839 777162 -49011 + AluSx SINE Alu 1 285 -27 1887 129 51 43 chr20_random 778631 779003 -47170 + THE1C LTR MaLR 1 375 0 2042 105 3 30 chr20_random 780183 780487 -45686 - AluY SINE Alu -15 296 1 2051 128 3 7 chr20_random 780748 781045 -45128 + AluSx SINE Alu 1 296 -16 515 229 52 69 chr20_random 781621 781852 -44321 - L1MC5 LINE L1 -763 7198 6972 28 61 0 0 chr20_random 781865 781914 -44259 + AT_rich Low_complexity Low_complexity 1 49 0 550 317 55 42 chr20_random 781999 782311 -43862 + L1MB1 LINE L1 5 320 -5571 423 314 29 46 chr20_random 782452 782791 -43382 + L1MB1 LINE L1 237 613 -5278 641 328 8 4 chr20_random 782969 783207 -42966 + L1MB1 LINE L1 691 929 -4962 9191 208 41 29 chr20_random 783221 785288 -40885 + L1MB1 LINE L1 2531 4648 -1344 1648 146 0 4 chr20_random 785288 785622 -40551 + AluSx SINE Alu 40 372 0 9191 208 41 29 chr20_random 785622 786604 -39569 + L1MB1 LINE L1 4648 5617 -375 331 130 0 54 chr20_random 786604 786696 -39477 + (TA)n Simple_repeat Simple_repeat 2 88 0 228 139 0 0 chr20_random 786698 786741 -39432 - LTR66 LTR ERVL -174 436 394 1577 213 22 3 chr20_random 786741 787103 -39070 + L1MB1 LINE L1 5611 5979 -13 1063 312 74 26 chr20_random 787111 787722 -38451 - L2 LINE L2 -90 3223 2574 1306 226 48 16 chr20_random 789233 789581 -36592 + MLT1A1 LTR MaLR 1 363 -2 398 136 0 30 chr20_random 790143 790209 -35964 - Alu SINE Alu -4 298 235 314 214 29 0 chr20_random 790209 790279 -35894 - MER52A LTR ERV1 0 1755 1684 * 3636 193 113 82 chr20_random 790271 791404 -34769 - MER52A LTR ERV1 -559 1196 29 3787 188 57 10 chr20_random 791548 792507 -33666 + L1MB7 LINE L1 5110 6108 -76 847 148 0 0 chr20_random 792514 792636 -33537 + AluSg/x SINE Alu 154 275 -37 341 306 122 15 chr20_random 792871 793097 -33076 + L1ME3A LINE L1 5430 5660 -461 309 233 58 29 chr20_random 793193 793296 -32877 + L1ME3A LINE L1 5844 5949 -221 2219 100 3 7 chr20_random 794775 795075 -31098 + AluSg SINE Alu 1 299 -11 181 200 0 0 chr20_random 795513 795543 -30630 + MER5A DNA MER1_type 145 174 -15 21 0 0 0 chr20_random 795586 795607 -30566 + AT_rich Low_complexity Low_complexity 1 21 0 231 232 43 29 chr20_random 795641 795710 -30463 - L2 LINE L2 -64 3249 3180 1727 121 114 7 chr20_random 795951 796224 -29949 + AluSg1 SINE Alu 2 303 -6 297 284 101 70 chr20_random 796326 796542 -29631 + L1ME LINE L1 5283 5518 -603 2318 111 0 0 chr20_random 796542 796848 -29325 - AluSq SINE Alu -5 308 3 297 284 101 70 chr20_random 796848 797018 -29155 + L1ME LINE L1 5518 5681 -440 2187 117 23 0 chr20_random 797040 797339 -28834 + AluSx SINE Alu 1 306 -6 323 151 38 0 chr20_random 797557 797610 -28563 + MER66A LTR ERV1 282 336 -142 215 30 0 30 chr20_random 797643 797676 -28497 + (TTAAA)n Simple_repeat Simple_repeat 3 34 0 294 270 175 40 chr20_random 797933 798059 -28114 + MIR3 SINE MIR 15 157 -51 526 247 11 34 chr20_random 798343 798521 -27652 - L1MC4 LINE L1 -4 8038 7865 377 132 0 0 chr20_random 798743 798796 -27377 + AluS SINE Alu 50 102 -200 24 53 0 0 chr20_random 799344 799382 -26791 + AT_rich Low_complexity Low_complexity 1 38 0 22 35 0 0 chr20_random 800686 800715 -25458 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr20_random 802028 802050 -24123 + AT_rich Low_complexity Low_complexity 1 22 0 1560 188 0 34 chr20_random 802335 802633 -23540 - AluJo SINE Alu -22 290 3 21 82 0 0 chr20_random 802794 802843 -23330 + AT_rich Low_complexity Low_complexity 1 49 0 292 302 113 19 chr20_random 803172 803278 -22895 - L2 LINE L2 -16 3297 3182 1968 153 11 11 chr20_random 803719 804066 -22107 - MER7A DNA MER2_type -1 345 1 8351 110 28 11 chr20_random 805076 805889 -20284 - L1PA8 LINE L1 -5 6167 5369 2050 128 0 10 chr20_random 805889 806185 -19988 - AluSq SINE Alu -20 293 1 8351 110 28 11 chr20_random 806185 807474 -18699 - L1PA8 LINE L1 -803 5369 4044 2621 180 46 36 chr20_random 808559 808785 -17388 - L1MB3 LINE L1 -351 5832 5610 225 0 0 0 chr20_random 808785 808810 -17363 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1658 133 20 0 chr20_random 808814 809062 -17111 - AluSg SINE Alu -57 253 1 2621 180 46 36 chr20_random 809062 809548 -16625 - L1MB3 LINE L1 -575 5608 5099 201 74 0 0 chr20_random 809866 809893 -16280 + (ATAAG)n Simple_repeat Simple_repeat 5 31 0 1399 224 25 8 chr20_random 810022 810363 -15810 + MER93a LTR ERV1 4 395 -7 721 190 0 44 chr20_random 810364 810501 -15672 - FLAM_A SINE Alu -2 131 1 564 111 0 11 chr20_random 810738 810828 -15345 + L1PA16 LINE L1 6069 6157 -9 338 346 46 7 chr20_random 810924 811077 -15096 - L1 LINE L1 -2281 3865 3707 23 54 0 0 chr20_random 811077 811114 -15059 + AT_rich Low_complexity Low_complexity 1 37 0 403 347 84 0 chr20_random 811484 811674 -14499 + MIR SINE MIR 28 233 -29 295 330 50 0 chr20_random 812252 812352 -13821 + L2 LINE L2 3194 3298 -15 1983 139 0 7 chr20_random 812449 812743 -13430 - AluSx SINE Alu -14 298 7 379 250 118 98 chr20_random 812849 813053 -13120 + MIR SINE MIR 44 251 -11 1660 125 3 17 chr20_random 813375 813662 -12511 + L1MA4 LINE L1 6018 6300 0 1201 291 99 21 chr20_random 814069 814616 -11557 - MER115 DNA AcHobo -50 643 15 317 321 14 21 chr20_random 814965 815104 -11069 + LTR16C LTR ERVL 340 477 -14 5277 142 0 37 chr20_random 815104 815242 -10931 - Tigger1 DNA MER2_type 0 2418 2276 1815 126 65 0 chr20_random 815242 815519 -10654 + AluSx SINE Alu 2 296 -16 5277 142 0 37 chr20_random 815519 816057 -10116 - Tigger1 DNA MER2_type -142 2276 1782 2085 131 3 0 chr20_random 816057 816354 -9819 + AluSp SINE Alu 4 301 -12 5277 142 0 37 chr20_random 816354 816584 -9589 - Tigger1 DNA MER2_type -636 1782 1545 599 111 248 26 chr20_random 816572 816689 -9484 - Tigger1 DNA MER2_type -1210 1208 1066 * 1653 173 3 36 chr20_random 816691 816997 -9176 - AluJb SINE Alu -16 296 1 754 183 0 8 chr20_random 817456 817587 -8586 + FLAM_C SINE Alu 1 130 -3 183 140 260 0 chr20_random 817643 817693 -8480 - MIR3 SINE MIR -17 191 129 1884 157 0 3 chr20_random 817814 818101 -8072 + AluSq SINE Alu 3 288 -25 2057 139 3 0 chr20_random 818348 818650 -7523 + AluSq SINE Alu 1 303 -10 21 36 0 0 chr20_random 818825 818853 -7320 + AT_rich Low_complexity Low_complexity 1 28 0 1542 179 7 38 chr20_random 819617 819908 -6265 + AluJo SINE Alu 1 282 -30 540 76 27 57 chr20_random 819922 820194 -5979 + (TA)n Simple_repeat Simple_repeat 1 263 0 750 278 128 39 chr20_random 820194 820682 -5491 + L1ME LINE L1 4647 5237 -925 1522 151 108 14 chr20_random 820682 820960 -5213 + AluSx SINE Alu 1 304 -8 750 278 128 39 chr20_random 820960 821246 -4927 + L1ME LINE L1 5237 5496 -666 2187 138 0 22 chr20_random 821246 821607 -4566 - THE1A LTR MaLR 0 355 3 11047 118 2 1 chr20_random 821632 823204 -2969 - THE1A-int LTR MaLR -5 1575 1 2346 113 3 43 chr20_random 823204 823574 -2599 - THE1A LTR MaLR 0 355 1 636 257 45 45 chr20_random 823574 823862 -2311 + L1ME LINE L1 5492 5779 -383 21 0 0 0 chr20_random 824226 824247 -1926 + AT_rich Low_complexity Low_complexity 1 21 0 1090 187 65 117 chr20_random 824257 824642 -1531 + MLT1A1 LTR MaLR 1 365 0 1086 216 4 28 chr20_random 825896 826146 -27 + AluJo SINE Alu 15 258 -54