302 231 0 0 chr18_random 2 54 -1781931 - Tigger7 DNA MER2_type -624 81 30 1019 241 51 4 chr18_random 70 306 -1781679 + MER21B LTR ERV1 614 860 -3 600 221 0 47 chr18_random 738 865 -1781120 - FLAM_A SINE Alu -9 124 4 421 362 5 15 chr18_random 1028 1224 -1780761 - MIR SINE MIR -6 256 63 219 198 8 83 chr18_random 1691 1812 -1780173 + T-rich Low_complexity Low_complexity 5 116 0 219 198 8 83 chr18_random 3286 3407 -1778578 + A-rich Low_complexity Low_complexity 5 116 0 2446 58 10 3 chr18_random 4281 4590 -1777395 + AluY SINE Alu 1 311 0 762 175 9 0 chr18_random 5476 5590 -1776395 + FLAM_A SINE Alu 4 118 -15 21 36 0 0 chr18_random 6123 6151 -1775834 + AT_rich Low_complexity Low_complexity 1 28 0 25 0 0 0 chr18_random 6280 6305 -1775680 + AT_rich Low_complexity Low_complexity 1 25 0 1966 136 0 7 chr18_random 6318 6626 -1775359 - AluSc SINE Alu -3 306 1 1622 97 0 5 chr18_random 6636 6853 -1775132 - AluY SINE Alu -10 301 86 23 0 0 0 chr18_random 7626 7649 -1774336 + AT_rich Low_complexity Low_complexity 1 23 0 27 0 0 0 chr18_random 7897 7924 -1774061 + AT_rich Low_complexity Low_complexity 1 27 0 721 249 61 0 chr18_random 8010 8207 -1773778 + L1MA4 LINE L1 6088 6296 -4 485 238 0 0 chr18_random 9363 9464 -1772521 + MIR3 SINE MIR 83 183 -25 227 322 35 35 chr18_random 9599 9742 -1772243 + MER5B DNA MER1_type 13 155 -23 322 336 90 37 chr18_random 10683 11037 -1770948 + L2 LINE L2 2929 3301 -12 200 359 0 0 chr18_random 11079 11143 -1770842 + MIR3 SINE MIR 120 183 -25 265 243 75 28 chr18_random 11355 11462 -1770523 - L2 LINE L2 -213 3059 2948 1500 215 97 54 chr18_random 11911 12408 -1769577 - MLT2B1 LTR ERVL -2 518 1 2169 116 3 0 chr18_random 12409 12703 -1769282 + AluSq SINE Alu 1 295 -18 238 336 29 19 chr18_random 13250 13354 -1768631 - MIR SINE MIR -88 174 70 338 216 104 37 chr18_random 13421 13555 -1768430 - L1MC4 LINE L1 0 8042 7900 294 29 0 0 chr18_random 13718 13753 -1768232 + (CA)n Simple_repeat Simple_repeat 2 36 0 1107 174 5 15 chr18_random 13804 13999 -1767986 - AluJo SINE Alu -84 228 36 23 33 0 0 chr18_random 14041 14071 -1767914 + AT_rich Low_complexity Low_complexity 1 30 0 492 275 135 5 chr18_random 15627 15827 -1766158 - MIR SINE MIR -29 233 8 1172 161 30 15 chr18_random 16750 16949 -1765036 + L1M1 LINE L1 1657 1858 -5707 8273 158 103 19 chr18_random 16953 17992 -1763993 - L1M1 LINE L1 -5888 1677 467 2534 80 0 0 chr18_random 17992 18303 -1763682 - AluY SINE Alu 0 311 1 8273 158 103 19 chr18_random 18303 18798 -1763187 - L1M1 LINE L1 -7098 467 15 192 77 0 0 chr18_random 20478 20504 -1761481 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 1235 246 111 22 chr18_random 21555 21917 -1760068 - MSTD LTR MaLR 0 396 3 309 309 73 8 chr18_random 23731 23854 -1758131 + MIR SINE MIR 57 187 -75 1133 226 162 3 chr18_random 24585 24881 -1757104 + MER2 DNA MER2_type 1 343 -1 704 359 55 25 chr18_random 25604 26166 -1755819 + L2 LINE L2 2060 2638 -676 748 314 36 16 chr18_random 26586 26838 -1755147 + MIR SINE MIR 6 262 0 221 349 113 19 chr18_random 26895 27107 -1754878 + MIR SINE MIR 28 259 -3 8631 188 19 23 chr18_random 27826 30581 -1751404 + L1PB4 LINE L1 3413 6153 -3 22 0 0 0 chr18_random 30581 30603 -1751382 + AT_rich Low_complexity Low_complexity 1 22 0 1885 139 7 4 chr18_random 30970 31250 -1750735 + AluSx SINE Alu 1 281 -31 200 322 126 0 chr18_random 31263 31350 -1750635 + MIR SINE MIR 151 248 -14 194 296 0 42 chr18_random 31432 31503 -1750482 - MIR3 SINE MIR -32 176 109 257 368 66 12 chr18_random 31973 32139 -1749846 - L2 LINE L2 -26 3246 3072 1648 189 100 43 chr18_random 32266 32726 -1749259 + LTR49 LTR ERV1 45 530 -65 2579 146 57 64 chr18_random 33381 33990 -1747995 + MER4B LTR ERV1 1 777 -2 33 0 0 0 chr18_random 34219 34252 -1747733 + AT_rich Low_complexity Low_complexity 1 33 0 4792 153 41 21 chr18_random 34615 35320 -1746665 + MER4D LTR ERV1 1 728 -175 3693 122 39 4 chr18_random 35320 35855 -1746130 - MER41A LTR ERV1 0 554 1 4792 153 41 21 chr18_random 35855 36035 -1745950 + MER4D LTR ERV1 728 903 0 230 279 21 20 chr18_random 36097 36213 -1745772 + GA-rich Low_complexity Low_complexity 1 194 0 453 297 63 18 chr18_random 36734 36956 -1745029 + MLT1D LTR MaLR 2 233 -272 1297 239 109 26 chr18_random 37081 37503 -1744482 + LTR29 LTR ERV1 166 622 0 723 221 92 28 chr18_random 37528 37745 -1744240 + MLT1D LTR MaLR 275 505 0 220 305 107 28 chr18_random 37748 37925 -1744060 - MIR SINE MIR -24 238 48 396 216 30 56 chr18_random 37945 38094 -1743891 - LTR19C LTR ERV1 0 779 638 5826 169 27 25 chr18_random 38094 38414 -1743571 - LTR49-int LTR ERV1 -814 5517 5199 2146 123 36 45 chr18_random 38414 38772 -1743213 + THE1A LTR MaLR 1 355 0 5826 169 27 25 chr18_random 38772 39548 -1742437 - LTR49-int LTR ERV1 -1132 5199 4418 637 237 71 75 chr18_random 39857 40110 -1741875 - MLT1J LTR MaLR -255 256 5 22 35 0 0 chr18_random 40601 40630 -1741355 + AT_rich Low_complexity Low_complexity 1 29 0 251 246 123 0 chr18_random 40972 41037 -1740948 + L2 LINE L2 3235 3307 -6 495 259 175 0 chr18_random 41746 41889 -1740096 + L3 LINE CR1 1150 1317 -260 1661 120 54 19 chr18_random 42123 42382 -1739603 + MER1B DNA MER1_type 1 268 -71 187 287 43 43 chr18_random 42685 42779 -1739206 - L2 LINE L2 -1339 1975 1882 29 70 0 0 chr18_random 43055 43112 -1738873 + AT_rich Low_complexity Low_complexity 1 57 0 1389 150 0 0 chr18_random 43196 43409 -1738576 + AluSx SINE Alu 1 213 -99 4626 160 54 16 chr18_random 44184 44246 -1737739 - L1MC2 LINE L1 -6 6338 6280 2385 71 7 0 chr18_random 44246 44540 -1737445 + AluY SINE Alu 1 296 -15 4626 160 54 16 chr18_random 44540 45384 -1736601 - L1MC2 LINE L1 -64 6280 5392 2158 99 36 0 chr18_random 45384 45688 -1736297 - L1PA16 LINE L1 -9 6157 5843 4626 160 54 16 chr18_random 45688 45864 -1736121 - L1MC2 LINE L1 -952 5392 5224 2311 107 0 0 chr18_random 47050 47349 -1734636 - AluSq SINE Alu -14 299 1 924 206 17 0 chr18_random 47734 47909 -1734076 - AluSg/x SINE Alu -1 311 134 2151 139 0 3 chr18_random 47909 48219 -1733766 - AluSx SINE Alu -3 309 1 596 89 13 0 chr18_random 48634 48713 -1733272 - MADE1 DNA Mariner 0 80 1 180 235 0 59 chr18_random 48913 48964 -1733021 + L2 LINE L2 3266 3313 0 975 248 22 0 chr18_random 50059 50281 -1731704 + MIR SINE MIR 36 262 0 544 211 55 0 chr18_random 50848 50957 -1731028 + MIR3 SINE MIR 82 196 -12 196 345 0 48 chr18_random 51204 51288 -1730697 + L2 LINE L2 3193 3272 0 225 0 0 0 chr18_random 51747 51772 -1730213 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 26 74 0 0 chr18_random 52901 52955 -1729030 + AT_rich Low_complexity Low_complexity 1 54 0 196 353 196 15 chr18_random 54313 54446 -1727539 - MIR3 SINE MIR -6 202 46 32 0 0 0 chr18_random 54865 54897 -1727088 + AT_rich Low_complexity Low_complexity 1 32 0 1141 247 171 66 chr18_random 56176 56662 -1725323 - MLT1F LTR MaLR 0 542 6 313 120 13 13 chr18_random 57200 57275 -1724710 + (TA)n Simple_repeat Simple_repeat 1 75 0 576 62 0 0 chr18_random 57275 57356 -1724629 + (GA)n Simple_repeat Simple_repeat 2 82 0 405 270 27 9 chr18_random 57358 57469 -1724516 + MER5B DNA MER1_type 63 175 -3 11566 199 8 78 chr18_random 57702 59945 -1722040 + L1 LINE L1 2280 4433 -1713 1054 174 0 0 chr18_random 59945 60123 -1721862 + AluSp SINE Alu 136 313 0 11566 199 8 78 chr18_random 60123 60826 -1721159 + L1 LINE L1 4433 5184 -962 419 131 11 73 chr18_random 60975 61166 -1720819 + (CCCTAA)n Simple_repeat Simple_repeat 1 179 0 2674 155 0 13 chr18_random 61311 61781 -1720204 - TAR1 Satellite telomeric -44 2067 1604 387 275 33 0 chr18_random 63025 63145 -1718840 + MIR SINE MIR 84 207 -55 692 270 0 27 chr18_random 63153 63338 -1718647 - MIR SINE MIR -6 256 77 416 19 19 0 chr18_random 63354 63407 -1718578 + (TTCA)n Simple_repeat Simple_repeat 3 56 0 231 240 107 0 chr18_random 64058 64133 -1717852 - L3b LINE CR1 -166 1417 1335 489 298 40 7 chr18_random 64388 64539 -1717446 - MIR3 SINE MIR -34 174 19 303 257 57 50 chr18_random 64795 64935 -1717050 - MIR SINE MIR -87 175 35 214 208 0 21 chr18_random 65192 65240 -1716745 + MIR SINE MIR 206 252 -10 277 285 50 59 chr18_random 65886 65988 -1715997 + MIR3 SINE MIR 79 180 -28 573 246 221 5 chr18_random 66527 66726 -1715259 - MIR SINE MIR -7 255 14 387 292 30 46 chr18_random 67012 67152 -1714833 - MIR SINE MIR -48 160 28 2401 94 0 3 chr18_random 67155 67464 -1714521 - AluSg SINE Alu -2 308 1 198 333 50 40 chr18_random 67778 67877 -1714108 - MIR SINE MIR -161 101 2 654 241 99 0 chr18_random 68881 69022 -1712963 + FRAM SINE Alu 1 155 -21 1989 125 0 3 chr18_random 69030 69318 -1712667 + AluSx SINE Alu 7 293 -19 22 0 0 0 chr18_random 69594 69616 -1712369 + AT_rich Low_complexity Low_complexity 1 22 0 24 0 0 0 chr18_random 69684 69708 -1712277 + AT_rich Low_complexity Low_complexity 1 24 0 746 318 112 32 chr18_random 69835 70310 -1711675 + L1MDb LINE L1 104 616 -5793 256 219 114 19 chr18_random 70317 70422 -1711563 + L1MDb LINE L1 454 568 -5841 311 332 70 28 chr18_random 70487 70701 -1711284 + L1MDb LINE L1 404 626 -5783 318 294 166 47 chr18_random 70868 71103 -1710882 + L1M2 LINE L1 982 1244 -5605 365 224 84 75 chr18_random 71805 72126 -1709859 - HSREP522 Satellite telomeric -112 392 69 486 278 58 50 chr18_random 72148 72529 -1709456 - HSREP522 Satellite telomeric 0 504 121 203 307 23 34 chr18_random 73760 73938 -1708047 + GA-rich Low_complexity Low_complexity 1 176 0 361 169 0 14 chr18_random 74710 74781 -1707204 - L1 LINE L1 -3308 2838 2769 264 30 0 0 chr18_random 74789 74822 -1707163 + (GTTTG)n Simple_repeat Simple_repeat 2 34 0 1700 145 32 3 chr18_random 74822 75098 -1706887 - AluSx SINE Alu -27 285 2 2222 222 14 10 chr18_random 75098 75593 -1706392 - L1 LINE L1 -2203 3943 3447 1669 245 16 0 chr18_random 75596 75967 -1706018 - MSTB LTR MaLR -49 377 1 3162 200 25 3 chr18_random 75981 76586 -1705399 - MSTB-int LTR MaLR -14 1637 1020 4567 270 37 27 chr18_random 76594 78159 -1703826 - L1P LINE L1 -2702 3444 1860 2014 141 14 0 chr18_random 78159 78450 -1703535 + AluSx SINE Alu 1 295 -17 4567 270 37 27 chr18_random 78450 78575 -1703410 - L1P LINE L1 -4286 1860 1738 5685 130 56 50 chr18_random 78607 82630 -1699355 + SVA Other Other 432 1383 -3 432 0 0 0 chr18_random 82658 82706 -1699279 + (TG)n Simple_repeat Simple_repeat 2 49 0 277 341 64 12 chr18_random 84094 84267 -1697718 + L2 LINE L2 2722 2903 -411 22 56 0 0 chr18_random 87604 87640 -1694345 + AT_rich Low_complexity Low_complexity 1 36 0 22 70 0 0 chr18_random 87938 87981 -1694004 + AT_rich Low_complexity Low_complexity 1 43 0 364 284 96 29 chr18_random 88120 88433 -1693552 + L1ME4a LINE L1 5510 5843 -278 363 277 67 0 chr18_random 88902 89021 -1692964 - L2 LINE L2 0 3313 3187 895 351 29 32 chr18_random 89235 89821 -1692164 + L1MEc LINE L1 365 948 -5773 268 253 0 22 chr18_random 89832 89923 -1692062 + L1MEc LINE L1 998 1086 -5635 248 231 58 70 chr18_random 89891 90047 -1691938 + L1MEc LINE L1 1298 1451 -5270 * 655 238 9 65 chr18_random 90200 90414 -1691571 + L1MEc LINE L1 2269 2470 -4251 * 1319 291 55 57 chr18_random 90394 91590 -1690395 + L1MEc LINE L1 2350 3519 -3021 1403 249 17 11 chr18_random 91603 91961 -1690024 + MLT1A1 LTR MaLR 6 365 0 319 294 71 20 chr18_random 91978 92230 -1689755 + L1MEc LINE L1 3555 3819 -2721 4238 77 8 10 chr18_random 92231 93202 -1688783 + L1P2 LINE L1 4851 5816 -338 255 306 25 19 chr18_random 93437 93594 -1688391 + L1ME3A LINE L1 5770 5927 -243 1122 62 0 0 chr18_random 93807 93951 -1688034 - AluY SINE Alu -7 304 161 386 143 13 0 chr18_random 93983 94060 -1687925 + (CA)n Simple_repeat Simple_repeat 1 78 0 24 85 0 0 chr18_random 95464 95523 -1686462 + AT_rich Low_complexity Low_complexity 1 59 0 281 227 0 27 chr18_random 96214 96289 -1685696 + MER5A DNA MER1_type 9 81 -108 25 40 0 20 chr18_random 97035 97052 -1684933 + AT_rich Low_complexity Low_complexity 1 17 -32 1695 167 39 23 chr18_random 97052 97358 -1684627 - AluSx SINE Alu -1 311 1 25 40 0 20 chr18_random 97358 97390 -1684595 + AT_rich Low_complexity Low_complexity 17 49 0 21 36 0 0 chr18_random 97915 97943 -1684042 + AT_rich Low_complexity Low_complexity 1 28 0 254 365 47 0 chr18_random 98199 98306 -1683679 + L2 LINE L2 2946 3057 -256 206 311 82 41 chr18_random 98749 98945 -1683040 - MIR SINE MIR -50 212 9 182 366 47 53 chr18_random 99900 100220 -1681765 - L2 LINE L2 -352 2962 2645 21 57 0 0 chr18_random 100759 100794 -1681191 + AT_rich Low_complexity Low_complexity 1 35 0 334 141 0 47 chr18_random 101509 101573 -1680412 - AluS SINE Alu -247 61 1 187 283 113 28 chr18_random 102245 102351 -1679634 + L2 LINE L2 3158 3272 0 488 314 50 27 chr18_random 102653 102873 -1679112 + MIR SINE MIR 2 226 -36 1185 150 34 24 chr18_random 102995 103202 -1678783 - AluJo SINE Alu -98 214 6 304 233 27 47 chr18_random 103586 103736 -1678249 + G-rich Low_complexity Low_complexity 2 148 0 447 238 0 0 chr18_random 103865 103966 -1678019 + MIR3 SINE MIR 83 183 -25 2363 62 3 7 chr18_random 104398 104703 -1677282 - AluY SINE Alu -7 304 1 369 0 0 0 chr18_random 106977 107018 -1674967 + (CA)n Simple_repeat Simple_repeat 1 41 0 527 318 6 12 chr18_random 107671 107844 -1674141 + (TG)n Simple_repeat Simple_repeat 1 172 0 229 171 14 14 chr18_random 108413 108483 -1673502 + CT-rich Low_complexity Low_complexity 4 73 0 452 187 72 226 chr18_random 109560 109919 -1672066 + MER51A LTR ERV1 331 634 0 * 656 230 62 62 chr18_random 109919 110143 -1671842 + LTR34 LTR ERV1 123 346 -353 559 216 176 11 chr18_random 110144 110320 -1671665 + LTR34 LTR ERV1 489 693 -6 853 261 19 41 chr18_random 110400 110714 -1671271 - ERVL LTR ERVL -338 5426 5120 194 333 0 37 chr18_random 112117 112198 -1669787 + MER5B DNA MER1_type 1 78 -100 3394 119 50 23 chr18_random 114785 115167 -1666818 + Tigger3b DNA MER2_type 148 553 -2475 2143 120 10 0 chr18_random 115167 115459 -1666526 - AluSx SINE Alu -17 295 1 3394 119 50 23 chr18_random 115459 115674 -1666311 + Tigger3b DNA MER2_type 553 761 -470 681 253 0 13 chr18_random 115738 115896 -1666089 + Tigger3b DNA MER2_type 1075 1230 -1 266 271 20 69 chr18_random 117895 117929 -1664056 - MIR SINE MIR -63 145 111 528 234 144 32 chr18_random 117929 118117 -1663868 + MER3 DNA MER1_type 1 209 0 266 271 20 69 chr18_random 118117 118198 -1663787 - MIR SINE MIR -97 111 35 302 256 110 0 chr18_random 121344 121426 -1660559 - MIR SINE MIR -70 192 102 268 350 94 6 chr18_random 121465 121645 -1660340 + MIR SINE MIR 55 250 -12 326 328 6 32 chr18_random 122828 123008 -1658977 + MIR SINE MIR 36 206 -56 501 319 94 0 chr18_random 123048 123261 -1658724 + MIR SINE MIR 4 236 -26 992 248 41 5 chr18_random 123524 123897 -1658088 - L1M4 LINE L1 -612 6060 5676 * 7548 252 65 30 chr18_random 123892 125327 -1656658 - L1M4c LINE L1 -1222 5422 4039 1813 162 10 29 chr18_random 125327 125635 -1656350 - AluJo SINE Alu -10 302 1 7548 252 65 30 chr18_random 125635 128409 -1653576 - L1M4c LINE L1 -2605 4039 794 2175 142 0 0 chr18_random 128409 128718 -1653267 - AluSg SINE Alu -1 309 1 7548 252 65 30 chr18_random 128718 129536 -1652449 - L1M4c LINE L1 -5850 794 6 252 0 0 0 chr18_random 130294 130322 -1651663 + (A)n Simple_repeat Simple_repeat 1 28 0 1856 209 84 23 chr18_random 130641 131153 -1650832 - MER44D DNA MER2_type -7 598 1 288 111 0 0 chr18_random 132186 132231 -1649754 + (GGA)n Simple_repeat Simple_repeat 1 45 0 1953 188 20 6 chr18_random 133061 133406 -1648579 - MLT1A1 LTR MaLR 0 365 16 1659 218 37 5 chr18_random 133442 133818 -1648167 - MLT1A1-int LTR MaLR -30 1705 1318 208 289 12 72 chr18_random 137037 137203 -1644782 + CT-rich Low_complexity Low_complexity 2 157 0 389 337 36 12 chr18_random 138214 138380 -1643605 - MIR3 SINE MIR -34 174 5 199 336 181 0 chr18_random 138405 138521 -1643464 - L2 LINE L2 0 3272 3136 243 257 6 11 chr18_random 138943 139122 -1642863 + (TG)n Simple_repeat Simple_repeat 1 178 0 589 370 64 27 chr18_random 139128 139609 -1642376 - L2 LINE L2 -641 2673 2175 1996 201 79 14 chr18_random 139871 140003 -1641982 - L1MA9 LINE L1 -10 6302 6180 219 36 0 0 chr18_random 140003 140031 -1641954 + (TG)n Simple_repeat Simple_repeat 1 28 0 1996 201 79 14 chr18_random 140031 140383 -1641602 - L1MA9 LINE L1 -132 6180 5780 210 37 0 0 chr18_random 140383 140410 -1641575 + (TG)n Simple_repeat Simple_repeat 2 28 0 1996 201 79 14 chr18_random 140410 140441 -1641544 - L1MA9 LINE L1 -532 5780 5752 * 2472 181 11 17 chr18_random 140438 140994 -1640991 + L1MA9 LINE L1 5203 5759 -553 271 296 30 37 chr18_random 141967 142102 -1639883 - MER5A DNA MER1_type -24 165 32 370 290 10 0 chr18_random 142155 142255 -1639730 - MER5A DNA MER1_type -84 105 5 1434 276 67 40 chr18_random 143391 143917 -1638068 + MLT1G1 LTR MaLR 31 570 -25 2118 132 0 0 chr18_random 144886 145196 -1636789 - AluSx SINE Alu -2 310 1 239 353 50 22 chr18_random 145559 145698 -1636287 + MIR SINE MIR 5 147 -115 458 321 38 13 chr18_random 147701 147860 -1634125 + MIR SINE MIR 59 221 -41 239 328 176 8 chr18_random 147893 148024 -1633961 - MIR SINE MIR -74 188 36 186 298 0 18 chr18_random 149466 149523 -1632462 - L2 LINE L2 -1044 2270 2215 263 254 0 0 chr18_random 151029 151088 -1630897 + L2 LINE L2 3251 3309 -4 36 82 0 0 chr18_random 151804 151889 -1630096 + AT_rich Low_complexity Low_complexity 1 85 0 1356 111 37 0 chr18_random 152422 152612 -1629373 - MER107 DNA MER1_type 0 197 1 1597 203 54 79 chr18_random 152910 153353 -1628632 + MSTB1 LTR MaLR 1 432 0 8986 211 47 16 chr18_random 153477 155651 -1626334 + L1 LINE L1 2169 4417 -1729 396 0 0 0 chr18_random 155651 155695 -1626290 + (CAAAA)n Simple_repeat Simple_repeat 3 46 0 8986 211 47 16 chr18_random 155695 155772 -1626213 + L1 LINE L1 4417 4490 -1656 233 167 0 0 chr18_random 155775 155811 -1626174 + Alu SINE Alu 136 171 -132 2923 233 4 9 chr18_random 155954 156701 -1625284 - L1 LINE L1 -927 5219 4477 697 258 5 10 chr18_random 156710 156904 -1625081 - AluSp SINE Alu 0 313 121 396 0 0 0 chr18_random 156969 157013 -1624972 + (GTTTG)n Simple_repeat Simple_repeat 2 45 0 23 33 0 0 chr18_random 157544 157574 -1624411 + GC_rich Low_complexity Low_complexity 1 30 0 27 49 0 0 chr18_random 159056 159097 -1622888 + GC_rich Low_complexity Low_complexity 1 41 0 195 100 0 0 chr18_random 161041 161071 -1620914 + (CCCTG)n Simple_repeat Simple_repeat 1 30 0 246 266 16 0 chr18_random 165996 166060 -1615925 + CT-rich Low_complexity Low_complexity 3 67 0 413 289 33 13 chr18_random 166446 166598 -1615387 - MIR SINE MIR -50 212 58 275 343 20 0 chr18_random 166858 166960 -1615025 - MLT1I LTR MaLR -141 268 165 326 358 58 29 chr18_random 166990 167197 -1614788 + L1MC4a LINE L1 5133 5345 -801 362 294 84 17 chr18_random 167277 167585 -1614400 + MLT1I LTR MaLR 4 406 -3 553 326 47 7 chr18_random 167606 167882 -1614103 + L1MC4a LINE L1 5577 5863 -1945 27 0 0 0 chr18_random 167936 167963 -1614022 + AT_rich Low_complexity Low_complexity 1 27 0 21 0 0 0 chr18_random 168005 168026 -1613959 + AT_rich Low_complexity Low_complexity 1 21 0 777 161 0 0 chr18_random 168176 168294 -1613691 - THE1C LTR MaLR -257 118 1 374 351 47 7 chr18_random 168295 168443 -1613542 - MLT1K LTR MaLR -421 167 14 1818 179 0 10 chr18_random 168498 168806 -1613179 + AluJb SINE Alu 1 305 -7 344 358 54 25 chr18_random 169558 169762 -1612223 - L3 LINE CR1 -9 1568 1359 2168 88 3 0 chr18_random 170758 171077 -1610908 - AluY SINE Alu 0 311 3 3017 131 39 10 chr18_random 171202 171476 -1610509 - Tigger3(Golem) DNA MER2_type 0 3028 2763 1903 109 84 0 chr18_random 171476 171761 -1610224 + AluSx SINE Alu 1 309 -3 3017 131 39 10 chr18_random 171761 172005 -1609980 - Tigger3(Golem) DNA MER2_type -265 2763 2495 1145 118 24 0 chr18_random 174054 174223 -1607762 + THE1C LTR MaLR 1 173 -202 935 98 0 0 chr18_random 174239 174362 -1607623 + L1MA3 LINE L1 6183 6305 0 23 0 0 0 chr18_random 174362 174385 -1607600 + AT_rich Low_complexity Low_complexity 1 23 0 4025 78 0 0 chr18_random 176130 176645 -1605340 + L1P LINE L1 9 523 -5623 185 194 149 15 chr18_random 177604 177671 -1604314 + MIR SINE MIR 36 111 -151 190 266 0 62 chr18_random 178002 178066 -1603919 + L2 LINE L2 3254 3313 0 893 159 118 0 chr18_random 178448 178618 -1603367 + MSTA LTR MaLR 18 207 -221 656 149 26 9 chr18_random 178634 178748 -1603237 + MSTA LTR MaLR 311 426 0 1001 87 31 0 chr18_random 178748 178909 -1603076 + MSTA-int LTR MaLR 1 166 -1485 * 3231 213 27 3 chr18_random 178903 179531 -1602454 + MSTA-int LTR MaLR 289 931 -720 1871 180 70 17 chr18_random 179532 179895 -1602090 + TAR1 Satellite telomeric 1 381 -150 1434 283 45 9 chr18_random 379954 380400 -1401585 - LTR40b LTR ERVL 0 462 1 1182 296 87 31 chr18_random 380558 381326 -1400659 - L1ME2 LINE L1 -200 5964 5140 3402 62 11 11 chr18_random 381467 381895 -1400090 + L1PA5 LINE L1 5702 6132 -22 1963 48 0 0 chr18_random 381895 382122 -1399863 + L1PA5 LINE L1 5925 6151 -3 3402 62 11 11 chr18_random 382122 382145 -1399840 + L1PA5 LINE L1 6131 6153 -1 246 200 74 96 chr18_random 382288 382423 -1399562 - L1MC4 LINE L1 -1263 6779 6648 201 240 0 0 chr18_random 382456 382531 -1399454 + (TA)n Simple_repeat Simple_repeat 2 76 0 271 156 0 0 chr18_random 383288 383333 -1398652 - L1MC1 LINE L1 -253 6080 6036 209 365 112 11 chr18_random 384846 385024 -1396961 + MIR3 SINE MIR 1 196 -12 21 71 0 0 chr18_random 385489 385531 -1396454 + AT_rich Low_complexity Low_complexity 1 42 0 24 53 0 0 chr18_random 385660 385698 -1396287 + AT_rich Low_complexity Low_complexity 1 38 0 254 209 0 0 chr18_random 385780 385823 -1396162 + AluJ/monomer SINE Alu 2 44 -259 287 169 34 0 chr18_random 386733 386792 -1395193 + MLT1I LTR MaLR 72 132 -277 413 265 5 53 chr18_random 386826 387015 -1394970 + (TATG)n Simple_repeat Simple_repeat 1 180 0 2015 250 78 16 chr18_random 387232 387864 -1394121 + L1MB7 LINE L1 5464 6134 -50 180 0 0 0 chr18_random 388236 388256 -1393729 + (A)n Simple_repeat Simple_repeat 1 20 0 270 0 0 0 chr18_random 389448 389478 -1392507 + (CA)n Simple_repeat Simple_repeat 2 31 0 2254 119 15 63 chr18_random 391335 391687 -1390298 + THE1C LTR MaLR 1 334 -41 1892 146 56 0 chr18_random 391687 391975 -1390010 - AluSx SINE Alu -7 305 2 2254 119 15 63 chr18_random 391975 392016 -1389969 + THE1C LTR MaLR 334 375 0 1684 176 3 11 chr18_random 393123 393407 -1388578 - AluJo SINE Alu -30 282 1 938 167 38 72 chr18_random 393409 393733 -1388252 - L1MC/D LINE L1 -765 5381 5214 2955 6 0 0 chr18_random 394520 394836 -1387149 - AluYb8 SINE Alu -2 316 1 1121 157 6 0 chr18_random 395544 395762 -1386223 + AluSg/x SINE Alu 140 358 0 2155 279 84 36 chr18_random 396774 396853 -1385132 - L1MC/D LINE L1 -1419 4727 4653 1886 163 0 0 chr18_random 396853 397165 -1384820 - AluSx SINE Alu 0 312 1 2155 279 84 36 chr18_random 397165 398541 -1383444 - L1MC/D LINE L1 -1493 4653 3201 3296 55 7 17 chr18_random 398572 398988 -1382997 + L1PA4 LINE L1 5744 6155 0 634 314 44 25 chr18_random 398989 399263 -1382722 + L1M3c LINE L1 1384 1662 -5834 * 2659 278 42 20 chr18_random 399254 400703 -1381282 + L1M3c LINE L1 2012 3420 -4146 23 0 0 0 chr18_random 402409 402432 -1379553 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr18_random 403235 403257 -1378728 + AT_rich Low_complexity Low_complexity 1 22 0 337 360 81 5 chr18_random 403326 403537 -1378448 + MIR SINE MIR 12 238 -24 195 315 11 90 chr18_random 403641 403730 -1378255 - MIR SINE MIR -108 100 19 279 0 0 0 chr18_random 405828 405859 -1376126 + (T)n Simple_repeat Simple_repeat 1 31 0 3715 262 51 20 chr18_random 406450 407893 -1374092 - L1MEc LINE L1 -2598 4343 2896 309 315 105 22 chr18_random 408255 408579 -1373406 - L1MEc LINE L1 -5963 460 110 305 178 27 0 chr18_random 411263 411336 -1370649 + GA-rich Low_complexity Low_complexity 3 77 0 222 118 0 0 chr18_random 412120 412154 -1369831 + (GGGA)n Simple_repeat Simple_repeat 1 34 0 558 308 23 30 chr18_random 412841 413143 -1368842 - HsTC2 DNA Tc2 -5 1893 1594 833 271 129 82 chr18_random 413206 413647 -1368338 - HsTC2 DNA Tc2 -1189 709 224 2150 128 3 0 chr18_random 413647 413952 -1368033 - AluSx SINE Alu -6 306 1 833 271 129 82 chr18_random 413952 414184 -1367801 - HsTC2 DNA Tc2 -1674 224 4 428 282 92 6 chr18_random 414506 414680 -1367305 + MLT1C LTR MaLR 60 248 -219 485 272 149 9 chr18_random 414719 414947 -1367038 + MLT1C LTR MaLR 201 460 -7 215 366 34 0 chr18_random 414992 415167 -1366818 + L2 LINE L2 964 1144 -2170 1987 144 0 10 chr18_random 415365 415664 -1366321 + AluSx SINE Alu 1 296 -16 778 287 27 0 chr18_random 415667 415928 -1366057 - L1MC1 LINE L1 -9 6324 6057 2201 129 13 10 chr18_random 416254 416611 -1365374 - AluSx SINE Alu 0 358 1 953 246 81 34 chr18_random 416833 417190 -1364795 + MLT1A2 LTR MaLR 1 374 0 252 349 55 0 chr18_random 417387 417496 -1364489 + L2 LINE L2 3153 3267 -5 216 0 0 0 chr18_random 418112 418136 -1363849 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 189 0 0 0 chr18_random 420148 420169 -1361816 + (CA)n Simple_repeat Simple_repeat 2 22 0 228 256 8 43 chr18_random 420177 420294 -1361691 + (TA)n Simple_repeat Simple_repeat 1 113 0 4177 159 43 5 chr18_random 421719 422466 -1359519 - L1MA6 LINE L1 0 6300 5526 25 31 0 0 chr18_random 423012 423044 -1358941 + AT_rich Low_complexity Low_complexity 1 32 0 279 0 0 0 chr18_random 423071 423102 -1358883 + (T)n Simple_repeat Simple_repeat 1 31 0 1293 247 84 23 chr18_random 424305 424743 -1357242 - MLT1C LTR MaLR 0 467 3 1201 280 52 11 chr18_random 425519 425901 -1356084 + MER63B DNA MER1_type 1 398 -38 2594 125 8 0 chr18_random 426054 426406 -1355579 - THE1A LTR MaLR 0 355 1 211 341 156 39 chr18_random 426406 426871 -1355114 + L2 LINE L2 2226 2792 -522 2011 139 109 3 chr18_random 426871 427209 -1354776 + THE1C LTR MaLR 1 374 -1 211 341 156 39 chr18_random 427209 427403 -1354582 + L2 LINE L2 2792 2962 -352 261 167 0 0 chr18_random 428811 428865 -1353120 + L1MA9 LINE L1 6217 6270 -42 3404 171 40 39 chr18_random 429412 430106 -1351879 - MER4D LTR ERV1 0 903 209 3199 209 52 47 chr18_random 430145 430930 -1351055 - MLT1A1-int LTR MaLR -946 789 1 1177 230 67 51 chr18_random 430930 431286 -1350699 - MLT1A1 LTR MaLR 0 365 4 239 114 0 0 chr18_random 431288 431332 -1350653 + L1MB3 LINE L1 6138 6181 -2 385 292 51 9 chr18_random 432406 432622 -1349363 - L1MDa LINE L1 -3959 2581 2357 378 232 87 7 chr18_random 432623 432761 -1349224 + Zaphod DNA AcHobo 3517 3665 -366 268 235 31 0 chr18_random 432761 432859 -1349126 + Zaphod DNA AcHobo 3790 3890 -141 1239 235 34 121 chr18_random 432897 433583 -1348402 - L1MDa LINE L1 -2064 4476 3851 1029 262 82 19 chr18_random 433631 434295 -1347690 - L1MDa LINE L1 -3483 3057 2339 587 285 98 0 chr18_random 434399 434704 -1347281 - L1MDa LINE L1 -5361 1182 848 292 317 116 6 chr18_random 435215 435379 -1346606 - MIR SINE MIR -80 182 1 382 320 17 0 chr18_random 436697 436831 -1345154 - MIR SINE MIR -65 143 36 550 283 103 38 chr18_random 437253 437785 -1344200 + L1MC4a LINE L1 5339 5899 -257 253 345 88 0 chr18_random 439495 439608 -1342377 + L2 LINE L2 3165 3287 -26 900 178 0 0 chr18_random 441116 441296 -1340689 + (TG)n Simple_repeat Simple_repeat 1 180 0 280 349 9 28 chr18_random 441617 441723 -1340262 - L2 LINE L2 -21 3251 3148 22 56 0 0 chr18_random 442513 442549 -1339436 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr18_random 442554 442575 -1339410 + AT_rich Low_complexity Low_complexity 1 21 0 29 0 0 0 chr18_random 443648 443677 -1338308 + AT_rich Low_complexity Low_complexity 1 29 0 26 30 0 0 chr18_random 444632 444665 -1337320 + AT_rich Low_complexity Low_complexity 1 33 0 2046 246 34 19 chr18_random 445017 445553 -1336432 + L1MD2 LINE L1 5536 6079 -280 2155 113 0 0 chr18_random 445623 445934 -1336051 - AluSq SINE Alu 0 312 2 24 53 0 0 chr18_random 446793 446831 -1335154 + AT_rich Low_complexity Low_complexity 1 38 0 1354 226 51 23 chr18_random 447019 447408 -1334577 + MLT1C LTR MaLR 65 464 -3 184 247 130 13 chr18_random 447798 447875 -1334110 + MIR SINE MIR 50 135 -73 2260 112 0 0 chr18_random 448527 448822 -1333163 - AluSx SINE Alu -17 295 1 2359 110 58 6 chr18_random 450784 451130 -1330855 - THE1B LTR MaLR 0 364 1 296 155 71 42 chr18_random 451188 451356 -1330629 + (TA)n Simple_repeat Simple_repeat 1 173 0 269 281 0 24 chr18_random 453280 453393 -1328592 + (CATA)n Simple_repeat Simple_repeat 1 110 0 1624 238 27 0 chr18_random 454742 455078 -1326907 - MER7A DNA MER2_type 0 346 4 2692 97 14 6 chr18_random 456469 456830 -1325155 + THE1B LTR MaLR 1 364 0 1923 127 18 3 chr18_random 457579 457863 -1324122 - AluSc SINE Alu -21 288 1 218 345 139 5 chr18_random 457957 458151 -1323834 - MIR SINE MIR -34 228 9 2226 95 0 3 chr18_random 458508 458812 -1323173 + AluY SINE Alu 1 303 -8 217 297 149 20 chr18_random 459525 459673 -1322312 - MIR SINE MIR -74 188 22 1192 201 49 103 chr18_random 459837 460265 -1321720 + MER66A LTR ERV1 100 478 0 1248 172 0 14 chr18_random 460962 461183 -1320802 + AluJo SINE Alu 87 304 -8 1166 171 0 0 chr18_random 461482 461687 -1320298 + AluSq SINE Alu 98 302 -11 185 296 200 15 chr18_random 462527 462662 -1319323 + MIR3 SINE MIR 46 205 -3 21 0 0 0 chr18_random 465183 465204 -1316781 + AT_rich Low_complexity Low_complexity 1 21 0 357 303 18 0 chr18_random 467256 467365 -1314620 + MER81 DNA DNA 4 114 0 318 194 0 0 chr18_random 469503 469565 -1312420 - MER57A LTR ERV1 -2 401 340 921 261 9 0 chr18_random 469566 469792 -1312193 - MER57A LTR ERV1 -168 235 8 312 284 84 32 chr18_random 470499 470654 -1311331 + L1MC3 LINE L1 6478 6640 -1145 330 229 0 0 chr18_random 470682 470778 -1311207 + (CA)n Simple_repeat Simple_repeat 2 97 0 3960 254 16 20 chr18_random 470825 471969 -1310016 + L1MC3 LINE L1 6646 7784 -1 1011 289 43 5 chr18_random 472000 472394 -1309591 + L1ME1 LINE L1 4015 4423 -1723 1347 258 36 27 chr18_random 472398 472921 -1309064 + L1ME1 LINE L1 4561 5088 -1058 510 213 24 71 chr18_random 473325 473410 -1308575 - MER115 DNA AcHobo 0 693 618 2613 23 0 0 chr18_random 473410 473710 -1308275 + AluY SINE Alu 1 300 -11 510 213 24 71 chr18_random 473710 473793 -1308192 - MER115 DNA AcHobo -75 618 533 210 188 21 0 chr18_random 475601 475649 -1306336 + A-rich Low_complexity Low_complexity 3 51 0 213 320 10 30 chr18_random 476230 476330 -1305655 - MER5A DNA MER1_type -85 104 7 408 174 0 0 chr18_random 476992 477084 -1304901 + CT-rich Low_complexity Low_complexity 1 92 0 239 122 0 137 chr18_random 478418 478623 -1303362 + (CCCCAG)n Simple_repeat Simple_repeat 2 178 0 1950 116 13 17 chr18_random 482596 482898 -1299087 + AluSx SINE Alu 1 301 -11 22 35 0 0 chr18_random 484724 484753 -1297232 + AT_rich Low_complexity Low_complexity 1 29 0 971 231 169 60 chr18_random 488560 489028 -1292957 + LTR40a LTR ERVL 1 519 0 544 171 152 91 chr18_random 489034 489268 -1292717 + L1ME1 LINE L1 5239 5483 -757 2879 276 60 15 chr18_random 489299 490316 -1291669 - Tigger6a DNA MER2_type -1 1082 20 1000 224 94 78 chr18_random 490319 490409 -1291576 + L1ME1 LINE L1 5494 5581 -585 2547 24 0 3 chr18_random 490409 490706 -1291279 - AluY SINE Alu -13 298 3 1000 224 94 78 chr18_random 490706 490986 -1290999 + L1ME1 LINE L1 5581 5870 -296 299 167 51 0 chr18_random 491302 491380 -1290605 + L1MA8 LINE L1 5968 6049 -242 479 253 50 33 chr18_random 491383 491565 -1290420 + Tigger6a DNA MER2_type 316 500 -583 230 208 0 101 chr18_random 491674 491852 -1290133 + (GGGTG)n Simple_repeat Simple_repeat 5 164 0 570 174 41 0 chr18_random 492089 492210 -1289775 + Tigger6a DNA MER2_type 576 701 -382 960 193 49 0 chr18_random 492214 492437 -1289548 + L1MA8 LINE L1 6053 6286 -5 650 277 111 4 chr18_random 492453 492688 -1289297 + L1ME1 LINE L1 5855 6114 -52 255 305 47 47 chr18_random 492832 493022 -1288963 + HAL1 LINE L1 2105 2294 -213 26 88 0 0 chr18_random 493349 493417 -1288568 + AT_rich Low_complexity Low_complexity 1 68 0 28 113 0 0 chr18_random 493478 493611 -1288374 + AT_rich Low_complexity Low_complexity 1 133 0 2074 132 41 39 chr18_random 495121 495484 -1286501 + THE1B LTR MaLR 1 364 0 1178 224 93 29 chr18_random 497022 497365 -1284620 + MLT1A1 LTR MaLR 1 365 0 760 164 103 119 chr18_random 497687 498065 -1283920 - LTR47A LTR ERVL 0 452 6 378 203 0 0 chr18_random 498273 498401 -1283584 + (TG)n Simple_repeat Simple_repeat 1 128 0 465 203 12 9 chr18_random 498416 498748 -1283237 + (TG)n Simple_repeat Simple_repeat 1 333 0 547 252 65 1 chr18_random 499047 499308 -1282677 - MLT2D LTR ERVL -89 325 13 258 266 51 13 chr18_random 499896 499975 -1282010 + L2 LINE L2 3191 3272 0 1082 214 164 68 chr18_random 500183 500513 -1281472 - MLT1C LTR MaLR 0 467 170 1621 167 128 12 chr18_random 500513 500849 -1281136 - THE1C LTR MaLR 0 375 1 1082 214 164 68 chr18_random 500849 500870 -1281115 - MLT1C LTR MaLR -297 170 152 13922 154 26 7 chr18_random 500870 503243 -1278742 + Tigger1 DNA MER2_type 1 2418 0 1082 214 164 68 chr18_random 503243 503316 -1278669 - MLT1C LTR MaLR -315 152 1 371 352 37 24 chr18_random 505149 505407 -1276578 + MIR SINE MIR 4 262 0 663 110 0 0 chr18_random 506827 506918 -1275067 + FLAM_C SINE Alu 34 124 -19 288 77 0 0 chr18_random 506918 506957 -1275028 + (TTTA)n Simple_repeat Simple_repeat 3 41 0 201 172 17 35 chr18_random 508482 508540 -1273445 + (TATAA)n Simple_repeat Simple_repeat 2 58 0 1710 234 35 5 chr18_random 512041 512442 -1269543 - L1ME1 LINE L1 -278 5957 5545 3142 251 69 56 chr18_random 512466 514638 -1267347 - L1ME1 LINE L1 -1808 4407 2024 1423 224 40 91 chr18_random 514638 515166 -1266819 + MLT1D LTR MaLR 1 501 -4 3142 251 69 56 chr18_random 515166 515330 -1266655 - L1ME1 LINE L1 -4191 2024 1863 2650 134 27 0 chr18_random 515359 515769 -1266216 + MSTA LTR MaLR 8 428 0 1290 223 110 0 chr18_random 515769 516061 -1265924 - LTR47A LTR ERVL -128 324 1 317 357 71 0 chr18_random 516271 516397 -1265588 + L2 LINE L2 3138 3272 0 428 347 0 0 chr18_random 520273 520446 -1261539 + (TG)n Simple_repeat Simple_repeat 2 174 0 246 206 0 0 chr18_random 520482 520545 -1261440 + (TG)n Simple_repeat Simple_repeat 1 63 0 423 264 0 0 chr18_random 520613 520791 -1261194 + (TG)n Simple_repeat Simple_repeat 1 178 0 315 267 0 0 chr18_random 520827 520973 -1261012 + (TG)n Simple_repeat Simple_repeat 1 146 0 453 247 0 0 chr18_random 520991 521157 -1260828 + (TG)n Simple_repeat Simple_repeat 1 166 0 187 286 71 36 chr18_random 523299 523411 -1258574 - MIR SINE MIR -66 142 27 809 191 111 111 chr18_random 523600 523925 -1258060 + MLT1C LTR MaLR 22 346 -121 603 240 154 0 chr18_random 523923 524015 -1257970 + MLT1C LTR MaLR 304 380 -125 * 2325 155 33 24 chr18_random 524015 524435 -1257550 - MSTA LTR MaLR -4 424 1 603 240 154 0 chr18_random 524435 524517 -1257468 + MLT1C LTR MaLR 380 505 0 318 26 0 0 chr18_random 527348 527387 -1254598 + (TG)n Simple_repeat Simple_repeat 2 40 0 296 231 31 0 chr18_random 527522 527652 -1254333 + (CA)n Simple_repeat Simple_repeat 2 135 0 26 88 0 0 chr18_random 528005 528073 -1253912 + AT_rich Low_complexity Low_complexity 1 68 0 338 280 17 23 chr18_random 528592 528767 -1253218 + (ACATG)n Simple_repeat Simple_repeat 4 177 0 487 275 89 38 chr18_random 530163 530454 -1251531 - MER77 LTR ERV1 -4 601 296 194 337 105 0 chr18_random 530731 530817 -1251168 + MIR SINE MIR 37 131 -131 329 283 76 41 chr18_random 530951 531096 -1250889 - L2 LINE L2 -2 3311 3162 2029 198 84 11 chr18_random 531234 531710 -1250275 + MLT2B1 LTR ERVL 1 511 -9 1108 224 58 74 chr18_random 531773 532153 -1249832 + MLT1A2 LTR MaLR 1 374 0 251 333 22 0 chr18_random 532513 532603 -1249382 + MIR SINE MIR 6 97 -165 261 333 0 0 chr18_random 738564 738645 -1043340 + (TA)n Simple_repeat Simple_repeat 2 82 0 1429 153 36 0 chr18_random 739548 739770 -1042215 - MER30 DNA MER1_type 0 230 1 618 254 8 0 chr18_random 740448 740570 -1041415 - L1M2 LINE L1 -5458 1391 1269 239 255 20 0 chr18_random 740570 740621 -1041364 - L1M2 LINE L1 -5529 1320 1269 253 245 19 0 chr18_random 740720 740773 -1041212 - L1M2 LINE L1 -5527 1322 1269 253 245 19 0 chr18_random 740771 740824 -1041161 - L1M2 LINE L1 -5527 1322 1269 229 283 19 0 chr18_random 740975 741028 -1040957 - L1M2 LINE L1 -5527 1322 1269 229 269 19 0 chr18_random 741078 741130 -1040855 - L1M2 LINE L1 -5528 1321 1269 253 245 19 0 chr18_random 741179 741232 -1040753 - L1M2 LINE L1 -5527 1322 1269 253 245 19 0 chr18_random 741230 741283 -1040702 - L1M2 LINE L1 -5527 1322 1269 229 269 19 0 chr18_random 741537 741589 -1040396 - L1M2 LINE L1 -5528 1321 1269 227 274 20 0 chr18_random 741638 741689 -1040296 - L1M2 LINE L1 -5527 1322 1271 241 264 19 0 chr18_random 741689 741742 -1040243 - L1M2 LINE L1 -5527 1322 1269 241 264 19 0 chr18_random 741791 741844 -1040141 - L1M2 LINE L1 -5527 1322 1269 227 274 20 0 chr18_random 741944 741995 -1039990 - L1M2 LINE L1 -5527 1322 1271 241 264 19 0 chr18_random 741995 742048 -1039937 - L1M2 LINE L1 -5527 1322 1269 241 264 19 0 chr18_random 742046 742099 -1039886 - L1M2 LINE L1 -5527 1322 1269 253 245 19 0 chr18_random 742148 742201 -1039784 - L1M2 LINE L1 -5527 1322 1269 229 283 19 0 chr18_random 742352 742405 -1039580 - L1M2 LINE L1 -5527 1322 1269 239 255 20 0 chr18_random 742556 742607 -1039378 - L1M2 LINE L1 -5527 1322 1271 253 245 19 0 chr18_random 742607 742660 -1039325 - L1M2 LINE L1 -5527 1322 1269 229 283 19 0 chr18_random 742709 742762 -1039223 - L1M2 LINE L1 -5527 1322 1269 236 264 19 0 chr18_random 742811 742864 -1039121 - L1M2 LINE L1 -5527 1322 1269 227 283 19 0 chr18_random 742862 742915 -1039070 - L1M2 LINE L1 -5527 1322 1269 * 253 245 19 0 chr18_random 743015 743068 -1038917 - L1M2 LINE L1 -5527 1322 1269 230 264 19 0 chr18_random 743066 743119 -1038866 - L1M2 LINE L1 -5527 1322 1269 * 229 283 19 0 chr18_random 743219 743272 -1038713 - L1M2 LINE L1 -5527 1322 1269 230 264 19 0 chr18_random 743474 743527 -1038458 - L1M2 LINE L1 -5527 1322 1269 400 238 0 11 chr18_random 744211 744392 -1037593 + CT-rich Low_complexity Low_complexity 2 180 0 432 251 3 3 chr18_random 744417 744754 -1037231 + CT-rich Low_complexity Low_complexity 1 337 0 230 303 0 13 chr18_random 744757 744833 -1037152 + C-rich Low_complexity Low_complexity 2 76 0 3508 132 33 4 chr18_random 747599 748252 -1033733 + L1PA15 LINE L1 5177 5844 -321 22 0 0 0 chr18_random 755012 755034 -1026951 + AT_rich Low_complexity Low_complexity 1 22 0 1948 127 7 3 chr18_random 755497 755796 -1026189 - AluSx SINE Alu -12 300 1 245 291 173 0 chr18_random 756413 756523 -1025462 + MIR SINE MIR 22 150 -112 378 0 0 0 chr18_random 757086 757128 -1024857 + (CA)n Simple_repeat Simple_repeat 2 43 0 3202 211 49 89 chr18_random 757357 758351 -1023634 + L1M2 LINE L1 3 956 -5893 489 224 41 8 chr18_random 761887 762019 -1019966 + MLT1B LTR MaLR 247 384 -6 593 282 67 19 chr18_random 765398 765714 -1016271 + MLT1C LTR MaLR 55 385 -82 793 217 59 0 chr18_random 768665 768886 -1013099 - L1MD1 LINE L1 0 6242 6009 207 329 0 0 chr18_random 769881 769957 -1012028 + G-rich Low_complexity Low_complexity 4 79 0 1346 109 0 16 chr18_random 770368 770561 -1011424 - MER30B DNA MER1_type 0 190 1 1788 181 0 3 chr18_random 770597 770896 -1011089 + AluSx SINE Alu 1 298 -14 2202 90 20 0 chr18_random 771439 771739 -1010246 + AluY SINE Alu 1 306 -5 291 288 48 56 chr18_random 772543 772668 -1009317 + MER20B DNA MER1_type 25 148 -635 1878 195 24 17 chr18_random 776310 776730 -1005255 - L1MC3 LINE L1 0 7785 7363 2151 237 99 47 chr18_random 776788 777555 -1004430 - L1MC3 LINE L1 -593 7192 6386 285 430 7 24 chr18_random 777736 778031 -1003954 - TAR1 Satellite telomeric -699 1412 1123 1676 260 116 3 chr18_random 779745 780321 -1001664 - L1MC3 LINE L1 -275 7510 6870 491 261 4 15 chr18_random 780344 781102 -1000883 + (TG)n Simple_repeat Simple_repeat 1 749 0 784 188 52 0 chr18_random 781105 781259 -1000726 - L1MC3 LINE L1 -916 6869 6708 354 342 84 22 chr18_random 781298 781523 -1000462 + MIR SINE MIR 18 256 -6 306 194 271 8 chr18_random 781571 781700 -1000285 + LTR50 LTR ERVL 52 214 -581 201 368 70 6 chr18_random 782981 783152 -998833 + MIR SINE MIR 60 241 -21 239 250 67 29 chr18_random 784009 784113 -997872 + L2 LINE L2 3201 3308 -5 1783 145 0 59 chr18_random 785291 785594 -996391 - AluJb SINE Alu -27 285 1 694 284 61 52 chr18_random 785896 786369 -995616 - L1MEd LINE L1 -2145 3984 3508 216 67 0 0 chr18_random 786620 786650 -995335 + (TG)n Simple_repeat Simple_repeat 2 31 0 22 35 0 0 chr18_random 786701 786730 -995255 + AT_rich Low_complexity Low_complexity 1 29 0 6442 96 3 0 chr18_random 786730 787625 -994360 - L1PA8 LINE L1 -3 6169 5272 1984 96 51 0 chr18_random 787619 787911 -994074 + L1PA8 LINE L1 4963 5269 -877 * 593 279 145 28 chr18_random 788127 788741 -993244 - L1MEd LINE L1 -3143 2986 2301 239 330 104 12 chr18_random 789178 789351 -992634 + MIR SINE MIR 73 261 -1 301 299 49 58 chr18_random 789368 789693 -992292 - HAL1 LINE L1 -864 1643 1322 285 179 36 0 chr18_random 789835 789891 -992094 + LTR50 LTR ERVL 17 74 -721 269 279 66 16 chr18_random 790326 790448 -991537 + LTR50 LTR ERVL 513 640 -155 257 323 131 43 chr18_random 790567 790849 -991136 - L1MEd LINE L1 -5348 771 465 2201 121 0 3 chr18_random 792158 792471 -989514 + AluSx SINE Alu 1 312 0 532 203 24 16 chr18_random 793931 794054 -987931 - L1PA15 LINE L1 -1 6164 6041 3044 217 87 19 chr18_random 794275 795168 -986817 - L1MD1 LINE L1 -28 6283 5330 2812 77 6 0 chr18_random 795156 795520 -986465 - L1PA6 LINE L1 -20 6134 5769 * 2961 257 51 47 chr18_random 795519 795776 -986209 - L1MD1 LINE L1 -2385 3830 3576 2191 127 0 0 chr18_random 795776 796084 -985901 - AluSc SINE Alu 0 309 2 2961 257 51 47 chr18_random 796084 797444 -984541 - L1MD1 LINE L1 -2639 3576 2329 277 301 0 0 chr18_random 801641 801714 -980271 + MIR3 SINE MIR 85 157 -51 239 290 110 15 chr18_random 802037 802237 -979748 + L1M4 LINE L1 3762 3980 -2166 900 230 29 0 chr18_random 802362 802571 -979414 - MER20 DNA MER1_type 0 219 5 338 193 45 23 chr18_random 802634 802722 -979263 + MER3 DNA MER1_type 98 187 -22 722 53 0 0 chr18_random 803810 803905 -978080 + L1PA4 LINE L1 6060 6154 -1 2228 111 3 3 chr18_random 804283 804581 -977404 + AluSq SINE Alu 1 298 -15 302 305 16 0 chr18_random 806749 806877 -975108 + MIR SINE MIR 117 246 -16 465 19 0 0 chr18_random 807249 807303 -974682 + (CA)n Simple_repeat Simple_repeat 1 54 0 2488 117 22 5 chr18_random 809526 809895 -972090 - THE1C LTR MaLR 0 375 1 498 245 20 34 chr18_random 811935 812082 -969903 - MER77 LTR ERV1 -407 198 54 2311 112 48 25 chr18_random 812778 813134 -968851 - THE1B LTR MaLR 0 364 1 1066 229 101 23 chr18_random 814021 814406 -967579 - MER96B DNA MER1_type -2 415 1 1384 229 15 24 chr18_random 814792 815129 -966856 - MLT1A1 LTR MaLR -31 334 1 2200 113 148 5 chr18_random 815713 816085 -965900 - MSTA LTR MaLR 0 428 4 201 244 0 0 chr18_random 816402 816447 -965538 + CT-rich Low_complexity Low_complexity 2 46 0 1204 247 38 0 chr18_random 816667 816954 -965031 + MLT2C1 LTR ERVL 20 317 -80 240 189 68 34 chr18_random 817111 817259 -964726 + (TTATA)n Simple_repeat Simple_repeat 2 154 0 1417 298 15 2 chr18_random 817598 818001 -963984 + L1MA5 LINE L1 235 642 -6567 335 233 88 62 chr18_random 818179 818429 -963556 + L1MA5 LINE L1 699 957 -6252 664 277 13 16 chr18_random 818493 818743 -963242 + L1MA5 LINE L1 1728 1969 -5240 1476 171 14 0 chr18_random 818763 819038 -962947 + L1MA5 LINE L1 2764 3042 -4167 276 111 0 0 chr18_random 819042 819087 -962898 + (TA)n Simple_repeat Simple_repeat 2 46 0 13024 191 37 38 chr18_random 819087 822920 -959065 + L1MA5 LINE L1 3008 6851 -511 3683 71 6 4 chr18_random 822915 823407 -958578 - L1PA8 LINE L1 -426 5746 5254 * 3306 74 0 0 chr18_random 823412 823833 -958152 + L1PA8 LINE L1 5746 6166 -6 3140 119 21 17 chr18_random 823833 824352 -957633 + L1MA5 LINE L1 6831 7360 -2 589 174 40 103 chr18_random 824371 824594 -957391 + MLT1E2 LTR MaLR 1 203 -302 1043 233 57 17 chr18_random 824713 825013 -956972 + MLT1-int LTR MaLR 291 602 -769 1196 290 99 26 chr18_random 825217 825721 -956264 + MLT1-int LTR MaLR 692 1232 -139 197 352 44 11 chr18_random 827474 827565 -954420 - MER5A DNA MER1_type -42 147 54 697 268 16 11 chr18_random 827572 827762 -954223 + L1MB8 LINE L1 5977 6167 -11 181 62 62 31 chr18_random 829343 829375 -952610 + MIR SINE MIR 84 116 -92 2615 7 0 0 chr18_random 832740 833030 -948955 - AluYb8 SINE Alu 0 318 29 2142 105 0 0 chr18_random 834623 834919 -947066 + AluSg SINE Alu 1 296 -14 494 197 197 7 chr18_random 835461 835608 -946377 - L1MC3 LINE L1 0 7785 7611 1983 138 3 6 chr18_random 837170 837481 -944504 + AluSx SINE Alu 1 310 -2 309 172 0 0 chr18_random 838161 838225 -943760 + (TA)n Simple_repeat Simple_repeat 2 65 0 423 291 118 42 chr18_random 839345 839888 -942097 + L1MDa LINE L1 672 1255 -4864 412 324 119 18 chr18_random 839954 840297 -941688 + L1MDa LINE L1 1327 1685 -915 1127 239 116 11 chr18_random 840715 841087 -940898 - REP3 LTR ERV -7 555 145 335 351 81 28 chr18_random 841515 841874 -940111 - L2 LINE L2 -1084 2230 1853 3588 266 74 45 chr18_random 841894 843156 -938829 + L1ME1 LINE L1 3799 5024 -1142 2029 118 0 0 chr18_random 843156 843444 -938541 - AluSx SINE Alu -24 288 1 3588 266 74 45 chr18_random 843444 844205 -937780 + L1ME1 LINE L1 5024 5762 -404 180 0 0 0 chr18_random 844205 844225 -937760 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1543 157 0 0 chr18_random 844227 844469 -937516 - AluSx SINE Alu -37 275 34 3588 266 74 45 chr18_random 844469 844687 -937298 + L1ME1 LINE L1 5762 6118 -48 330 153 0 0 chr18_random 847393 847452 -934533 + (TG)n Simple_repeat Simple_repeat 2 60 0 255 331 128 32 chr18_random 848707 848988 -932997 - HAL1 LINE L1 -902 1605 1298 813 307 82 11 chr18_random 849286 849739 -932246 + MLT1E2 LTR MaLR 37 521 -105 1618 148 17 126 chr18_random 850030 850435 -931550 + THE1B LTR MaLR 1 361 -3 261 333 147 11 chr18_random 850684 850861 -931124 + MIR SINE MIR 49 249 -13 480 139 0 0 chr18_random 851298 851377 -930608 + (CA)n Simple_repeat Simple_repeat 1 79 0 661 307 95 10 chr18_random 851621 851917 -930068 + MER58B DNA MER1_type 21 341 0 188 253 59 0 chr18_random 853225 853284 -928701 + MIR SINE MIR 86 149 -59 218 256 24 24 chr18_random 857098 857180 -924805 + (TATATG)n Simple_repeat Simple_repeat 4 85 0 588 297 54 60 chr18_random 857913 858283 -923702 - MLT1I LTR MaLR -10 399 32 236 370 45 13 chr18_random 859397 859551 -922434 + L2 LINE L2 2698 2856 -458 897 168 7 0 chr18_random 861078 861265 -920720 - FRAM SINE Alu 0 176 1 207 0 0 0 chr18_random 862305 862328 -919657 + (CA)n Simple_repeat Simple_repeat 2 24 0 463 160 40 23 chr18_random 865210 865385 -916600 + CT-rich Low_complexity Low_complexity 1 178 0 471 175 42 12 chr18_random 865539 865705 -916280 + CT-rich Low_complexity Low_complexity 4 174 0 270 269 39 26 chr18_random 865864 865942 -916043 - MIR SINE MIR -105 157 79 2167 68 10 3 chr18_random 866382 866674 -915311 + AluY SINE Alu 1 294 -17 188 222 0 16 chr18_random 867223 867286 -914699 + GA-rich Low_complexity Low_complexity 2 63 0 192 312 48 64 chr18_random 867409 867534 -914451 + L2 LINE L2 2948 3070 -202 511 308 75 20 chr18_random 867745 868092 -913893 + L1MEc LINE L1 65 430 -5966 822 296 0 28 chr18_random 868381 868594 -913391 + MER58A DNA MER1_type 1 207 -17 855 286 107 14 chr18_random 868609 869168 -912817 + L1MEc LINE L1 750 1360 -5036 386 315 35 7 chr18_random 869168 869311 -912674 + L1MEc LINE L1 3516 3662 -2553 1352 205 91 59 chr18_random 869357 869923 -912062 + LTR48 LTR ERV1 6 781 -6 3292 266 128 12 chr18_random 869953 871184 -910801 + L1MEc LINE L1 3751 5176 -1039 2921 78 0 26 chr18_random 871184 871419 -910566 + THE1C LTR MaLR 1 224 -151 2093 113 0 3 chr18_random 871419 871721 -910264 + AluY SINE Alu 1 301 -10 2921 78 0 26 chr18_random 871721 871868 -910117 + THE1C LTR MaLR 224 373 -2 3292 266 128 12 chr18_random 871868 872078 -909907 + L1MEc LINE L1 5176 5360 -855 288 295 62 31 chr18_random 873094 873223 -908762 + Charlie1 DNA MER1_type 8 140 -2621 1975 211 164 22 chr18_random 873230 873738 -908247 + Charlie1 DNA MER1_type 1984 2613 -148 2348 79 0 0 chr18_random 873738 874041 -907944 - AluY SINE Alu -8 303 1 1975 211 164 22 chr18_random 874041 874210 -907775 + Charlie1 DNA MER1_type 2613 2757 -4 1960 117 81 36 chr18_random 874433 874792 -907193 - THE1C LTR MaLR 0 375 1 267 254 86 46 chr18_random 875337 875534 -906451 - L1ME LINE L1 -224 5897 5693 511 92 46 0 chr18_random 875537 875646 -906339 + (TCTA)n Simple_repeat Simple_repeat 3 116 0 21 82 0 0 chr18_random 876019 876068 -905917 + AT_rich Low_complexity Low_complexity 1 49 0 21 0 0 0 chr18_random 876330 876351 -905634 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr18_random 876634 876663 -905322 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr18_random 876769 876790 -905195 + AT_rich Low_complexity Low_complexity 1 21 0 208 125 16 62 chr18_random 877434 877498 -904487 + (CCTG)n Simple_repeat Simple_repeat 4 64 0 23 0 0 0 chr18_random 877678 877701 -904284 + AT_rich Low_complexity Low_complexity 1 23 0 188 287 119 10 chr18_random 878725 878826 -903159 + MIR SINE MIR 42 153 -109 21 0 0 0 chr18_random 881297 881318 -900667 + AT_rich Low_complexity Low_complexity 1 21 0 1394 30 6 0 chr18_random 884922 885087 -896898 + L1PA5 LINE L1 5977 6142 -12 225 0 0 0 chr18_random 885087 885112 -896873 + (TA)n Simple_repeat Simple_repeat 2 26 0 264 229 36 0 chr18_random 885729 885812 -896173 - MIR SINE MIR -100 162 77 188 287 119 10 chr18_random 887637 887738 -894247 + MIR SINE MIR 42 153 -109 21 0 0 0 chr18_random 890213 890234 -891751 + AT_rich Low_complexity Low_complexity 1 21 0 1394 42 6 0 chr18_random 893131 893299 -888686 + L1PA5 LINE L1 5977 6145 -9 264 229 36 0 chr18_random 893927 894010 -887975 - MIR SINE MIR -100 162 77 708 0 33 0 chr18_random 895090 895182 -886803 + (TCTA)n Simple_repeat Simple_repeat 4 98 0 27 0 0 0 chr18_random 895550 895577 -886408 + AT_rich Low_complexity Low_complexity 1 27 0 295 186 17 0 chr18_random 897733 897792 -884193 - MIR SINE MIR -55 153 94 222 240 0 0 chr18_random 898897 898947 -883038 + T-rich Low_complexity Low_complexity 1 50 0 232 258 65 54 chr18_random 901250 901343 -880642 - HAL1b LINE L1 -1031 317 224 1524 174 17 17 chr18_random 901353 901647 -880338 - AluJo SINE Alu -18 294 1 22 0 0 0 chr18_random 901654 901676 -880309 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr18_random 901692 901714 -880271 + AT_rich Low_complexity Low_complexity 1 22 0 394 318 57 14 chr18_random 901790 902001 -879984 + MER58A DNA MER1_type 1 220 -4 916 258 147 47 chr18_random 902006 902583 -879402 - HAL1 LINE L1 -112 2395 1877 2337 103 3 0 chr18_random 902583 902893 -879092 - AluY SINE Alu 0 311 1 916 258 147 47 chr18_random 902893 902904 -879081 - HAL1 LINE L1 -630 1877 1869 6167 103 26 0 chr18_random 902904 904086 -877899 - L1PA11 LINE L1 -1 6173 4974 916 258 147 47 chr18_random 904086 904332 -877653 - HAL1 LINE L1 -638 1869 1476 263 361 46 10 chr18_random 905357 905551 -876434 + L3 LINE CR1 558 758 -819 3563 118 17 11 chr18_random 906122 906646 -875339 + MER1A DNA MER1_type 1 527 0 364 153 14 0 chr18_random 906879 906951 -875034 - L1MB8 LINE L1 -1 6177 6105 807 260 52 40 chr18_random 906951 907297 -874688 - L1ME1 LINE L1 -243 5923 5574 1940 219 68 27 chr18_random 907299 907585 -874400 - L1MC2 LINE L1 -12 6401 6128 2255 110 0 0 chr18_random 907585 907877 -874108 + AluSx SINE Alu 1 292 -20 1940 219 68 27 chr18_random 907877 908151 -873834 - L1MC2 LINE L1 -285 6128 5818 1282 252 74 9 chr18_random 908155 908895 -873090 - L1MC2 LINE L1 -586 5649 4869 1177 248 118 39 chr18_random 908893 909543 -872442 + L1MEc LINE L1 1615 2316 -4080 * 611 227 30 35 chr18_random 909563 909766 -872219 + L1M4 LINE L1 4577 4778 -1368 529 249 57 91 chr18_random 910066 910363 -871622 - L1MC2 LINE L1 -6063 333 47 493 350 8 4 chr18_random 910412 910649 -871336 + L1MA9 LINE L1 6035 6272 -40 23 54 0 0 chr18_random 911885 911922 -870063 + AT_rich Low_complexity Low_complexity 1 37 0 2259 112 7 0 chr18_random 913944 914249 -867736 + AluSx SINE Alu 1 307 -5 1649 186 0 28 chr18_random 914254 914571 -867414 + AluJb SINE Alu 1 308 -4 2150 137 0 0 chr18_random 914814 915106 -866879 + AluSx SINE Alu 5 296 -16 297 276 26 72 chr18_random 915632 915784 -866201 - MIR SINE MIR 0 262 118 1367 71 6 0 chr18_random 915821 915990 -865995 + Tigger3b DNA MER2_type 341 510 -721 2197 137 42 6 chr18_random 916162 916521 -865464 + THE1C LTR MaLR 3 374 -1 6849 131 68 5 chr18_random 916578 917699 -864286 + Tigger3b DNA MER2_type 40 1231 0 2411 91 0 0 chr18_random 917941 918238 -863747 - AluY SINE Alu -13 298 2 801 251 74 58 chr18_random 918310 918367 -863618 + L1MC3 LINE L1 1005 1060 -5366 186 43 0 0 chr18_random 918367 918390 -863595 + (CAAAA)n Simple_repeat Simple_repeat 3 25 0 801 251 74 58 chr18_random 918390 918558 -863427 + L1MC3 LINE L1 1060 1224 -5202 3274 202 124 22 chr18_random 918558 919403 -862582 - MER21A LTR ERV1 0 931 1 801 251 74 58 chr18_random 919403 919925 -862060 + L1MC3 LINE L1 1224 1939 -4487 2094 131 7 0 chr18_random 919925 920231 -861754 - AluSx SINE Alu -4 308 1 801 251 74 58 chr18_random 920231 920296 -861689 + L1MC3 LINE L1 1939 2001 -4425 305 273 32 37 chr18_random 920449 920665 -861320 + L1MC3 LINE L1 3287 3501 -2925 309 175 75 38 chr18_random 920734 920814 -861171 + AluJ/FRAM SINE Alu 219 301 -1 2709 252 62 63 chr18_random 920814 922019 -859966 + L1MC3 LINE L1 3618 4821 -1605 5904 167 29 6 chr18_random 922019 922304 -859681 + L1MA4 LINE L1 5182 5459 -1121 2078 183 0 15 chr18_random 922304 922642 -859343 + MER1B DNA MER1_type 5 337 0 5904 167 29 6 chr18_random 922642 923696 -858289 + L1MA4 LINE L1 5459 6558 -22 5787 239 60 36 chr18_random 923712 926312 -855673 + L1MC3 LINE L1 4820 7483 -582 726 106 0 0 chr18_random 926322 926416 -855569 - AluJb SINE Alu -201 111 18 2485 261 62 7 chr18_random 926541 927154 -854831 + MER82 DNA MER2_type 5 651 -2 265 286 48 7 chr18_random 927363 927510 -854475 + CT-rich Low_complexity Low_complexity 1 153 0 * 310 262 0 80 chr18_random 927450 927637 -854348 + C-rich Low_complexity Low_complexity 1 172 0 533 319 116 28 chr18_random 927643 928100 -853885 + L2 LINE L2 2817 3313 0 389 300 111 49 chr18_random 929470 930208 -851777 + L1M4c LINE L1 792 1725 -4818 324 231 40 58 chr18_random 930237 930410 -851575 - L1ME LINE L1 -5360 845 676 344 302 189 30 chr18_random 930780 931081 -850904 - L1ME LINE L1 -5918 478 130 423 0 0 0 chr18_random 931170 931217 -850768 + (CCAA)n Simple_repeat Simple_repeat 2 48 0 312 293 53 37 chr18_random 931228 931337 -850648 + L1M4c LINE L1 1775 1890 -4673 2244 124 0 9 chr18_random 931337 931652 -850333 + AluSx SINE Alu 1 312 0 312 293 53 37 chr18_random 931652 931730 -850255 + L1M4c LINE L1 1890 1965 -4598 1034 248 85 3 chr18_random 932316 932623 -849362 + L1MA9 LINE L1 5981 6312 0 21 0 0 0 chr18_random 932783 932804 -849181 + AT_rich Low_complexity Low_complexity 1 21 0 2202 115 0 31 chr18_random 934192 934513 -847472 + AluSx SINE Alu 1 311 -1 2414 136 28 0 chr18_random 936564 936918 -845067 + THE1B LTR MaLR 1 364 0 444 19 0 0 chr18_random 937064 937117 -844868 + (TG)n Simple_repeat Simple_repeat 1 53 0 2165 112 0 7 chr18_random 938141 938437 -843548 - AluSx SINE Alu -18 294 1 269 304 0 20 chr18_random 939199 939301 -842684 + CT-rich Low_complexity Low_complexity 2 101 0 186 210 12 25 chr18_random 940810 940891 -841094 + (TG)n Simple_repeat Simple_repeat 2 81 0 296 226 0 12 chr18_random 941378 941462 -840523 + (TG)n Simple_repeat Simple_repeat 1 83 0 186 43 0 0 chr18_random 942595 942618 -839367 + (TAGA)n Simple_repeat Simple_repeat 4 26 0 188 353 15 0 chr18_random 944147 944215 -837770 + L2 LINE L2 3012 3080 -192 219 280 0 0 chr18_random 944465 944515 -837470 + L2 LINE L2 3221 3270 -2 4690 122 17 16 chr18_random 946527 947202 -834783 - L1PA14 LINE L1 -1 6160 5482 1737 148 41 7 chr18_random 947202 947493 -834492 - AluJb SINE Alu -11 301 1 4690 122 17 16 chr18_random 947493 947525 -834460 - L1PA14 LINE L1 -679 5482 5452 221 288 41 0 chr18_random 950163 950236 -831749 + MIR SINE MIR 52 127 -135 1839 71 0 0 chr18_random 950360 950586 -831399 - AluY SINE Alu -1 310 85 25 0 0 0 chr18_random 950753 950778 -831207 + AT_rich Low_complexity Low_complexity 1 25 0 460 257 112 59 chr18_random 950793 951232 -830753 + L1ME3A LINE L1 4368 4829 -1317 795 198 45 11 chr18_random 951326 951503 -830482 + MER5A DNA MER1_type 7 189 0 599 143 0 0 chr18_random 951674 951765 -830220 + LTR37B LTR ERV1 199 289 -179 1277 158 0 14 chr18_random 951879 952094 -829891 + AluJo SINE Alu 79 290 -22 241 265 29 0 chr18_random 952116 952184 -829801 + LTR37B LTR ERV1 399 468 0 1005 291 116 18 chr18_random 952445 953137 -828848 + L1ME3A LINE L1 5106 5849 -321 202 200 18 55 chr18_random 954686 954741 -827244 + G-rich Low_complexity Low_complexity 5 57 0 696 134 0 0 chr18_random 955847 955944 -826041 + AluJ/FLAM SINE Alu 3 99 -213 421 264 63 35 chr18_random 956308 956482 -825503 - L1ME LINE L1 -477 6482 6304 1353 221 93 3 chr18_random 956484 956806 -825179 - MLT1B LTR MaLR -1 389 39 673 233 259 39 chr18_random 956817 957483 -824502 - L1ME LINE L1 -817 6124 5490 2154 273 70 30 chr18_random 957494 958658 -823327 + L1M4 LINE L1 3840 5049 -1097 986 246 92 67 chr18_random 959271 959489 -822496 + MER97b DNA MER1_type? 3 214 -839 2708 36 0 0 chr18_random 959489 959791 -822194 + L1PA5 LINE L1 5845 6146 -8 986 246 92 67 chr18_random 959791 960006 -821979 + MER97b DNA MER1_type? 214 447 -606 488 282 57 64 chr18_random 960015 960313 -821672 - L1ME LINE L1 -4127 2995 2700 602 274 130 57 chr18_random 960325 961065 -820920 - L1ME LINE L1 -4475 2647 1710 264 289 11 28 chr18_random 961071 961251 -820734 + (TTA)n Simple_repeat Simple_repeat 2 178 0 786 270 93 3 chr18_random 961390 961712 -820273 - L1ME LINE L1 -4891 1532 1182 969 251 102 34 chr18_random 962808 963337 -818648 + MER114 LTR ERV 1 565 -83 26 101 0 0 chr18_random 963598 963687 -818298 + AT_rich Low_complexity Low_complexity 1 89 0 2068 128 0 0 chr18_random 964439 964759 -817226 - AluSx SINE Alu 0 312 13 23 0 0 0 chr18_random 965245 965268 -816717 + AT_rich Low_complexity Low_complexity 1 23 0 2560 116 28 3 chr18_random 965382 965737 -816248 + THE1B LTR MaLR 1 364 0 31 58 0 0 chr18_random 966195 966247 -815738 + AT_rich Low_complexity Low_complexity 1 52 0 1821 166 86 11 chr18_random 966776 967125 -814860 + THE1C LTR MaLR 1 375 0 195 347 0 63 chr18_random 967311 967406 -814579 + MIR SINE MIR 15 103 -159 1009 229 32 20 chr18_random 967589 967838 -814147 + MSTB1 LTR MaLR 23 274 -158 34 79 0 0 chr18_random 968551 968627 -813358 + AT_rich Low_complexity Low_complexity 1 76 0 21 71 0 0 chr18_random 969205 969247 -812738 + AT_rich Low_complexity Low_complexity 1 42 0 264 154 0 0 chr18_random 969563 969615 -812370 + (TAGA)n Simple_repeat Simple_repeat 3 54 0 282 350 45 57 chr18_random 970055 970232 -811753 - MIR3 SINE MIR -30 178 4 2086 108 29 0 chr18_random 971073 971350 -810635 + AluSx SINE Alu 1 285 -27 184 273 73 24 chr18_random 972511 972595 -809390 - MIR SINE MIR -61 147 91 311 0 26 0 chr18_random 974310 974349 -807636 + (TG)n Simple_repeat Simple_repeat 2 41 0 24 0 0 0 chr18_random 974476 974500 -807485 + AT_rich Low_complexity Low_complexity 1 24 0 3824 209 32 9 chr18_random 974522 975396 -806589 + L1MB3 LINE L1 5290 6183 0 228 170 0 0 chr18_random 975401 975454 -806531 + GA-rich Low_complexity Low_complexity 2 54 0 366 61 0 0 chr18_random 975960 976009 -805976 + (TTCA)n Simple_repeat Simple_repeat 1 49 0 188 336 219 16 chr18_random 976010 976138 -805847 - L2 LINE L2 -14 3258 3105 390 139 69 0 chr18_random 977213 977285 -804700 - L1MA7 LINE L1 0 6291 6215 3744 189 15 24 chr18_random 977286 978136 -803849 - L1MA7 LINE L1 -195 6096 5207 2081 86 0 4 chr18_random 978137 978404 -803581 - AluSg SINE Alu -14 296 31 707 187 119 41 chr18_random 978407 978675 -803310 + L1MC3 LINE L1 2175 2463 -3963 867 219 45 8 chr18_random 978676 978922 -803063 + L1MC3 LINE L1 4964 5218 -1208 9162 216 66 26 chr18_random 978978 979022 -802963 + L1MC3 LINE L1 5414 5455 -2610 2174 129 0 0 chr18_random 979022 979324 -802661 - AluSx SINE Alu -10 302 1 9162 216 66 26 chr18_random 979324 981827 -800158 + L1MC3 LINE L1 5455 8064 -1 860 308 131 60 chr18_random 982411 982700 -799285 - L1M4 LINE L1 -1131 5015 4748 2128 125 3 10 chr18_random 982700 983012 -798973 - AluSg SINE Alu 0 310 1 860 308 131 60 chr18_random 983012 984503 -797482 - L1M4 LINE L1 -1398 4748 3108 27 81 0 0 chr18_random 984701 984763 -797222 + AT_rich Low_complexity Low_complexity 1 62 0 1746 234 43 11 chr18_random 984807 985269 -796716 + L1 LINE L1 4189 4665 -1481 9519 210 23 45 chr18_random 985276 988907 -793078 + L1PA16 LINE L1 2903 6435 -11 3988 175 3 15 chr18_random 988920 989604 -792381 + L1PA16 LINE L1 5482 6157 -9 27 49 0 0 chr18_random 989613 989654 -792331 + AT_rich Low_complexity Low_complexity 1 41 0 282 212 59 0 chr18_random 989672 989757 -792228 - L1MC4 LINE L1 -1339 6703 6614 227 188 0 47 chr18_random 989759 989823 -792162 + (TA)n Simple_repeat Simple_repeat 1 61 0 639 142 11 45 chr18_random 989834 990010 -791975 + (TA)n Simple_repeat Simple_repeat 1 170 0 328 211 0 73 chr18_random 990010 990119 -791866 + L1MC4 LINE L1 6603 6703 -1339 5740 189 16 13 chr18_random 990204 991510 -790475 + L1MC2 LINE L1 5031 6342 -2 628 280 78 28 chr18_random 991542 991903 -790082 + L1MEd LINE L1 860 1238 -4881 267 104 0 0 chr18_random 992011 992059 -789926 + (A)n Simple_repeat Simple_repeat 1 48 0 1713 116 50 70 chr18_random 992158 992460 -789525 - AluSg SINE Alu -14 296 1 231 114 0 0 chr18_random 992721 992756 -789229 + (T)n Simple_repeat Simple_repeat 1 35 0 231 61 0 0 chr18_random 992936 992969 -789016 + (T)n Simple_repeat Simple_repeat 1 33 0 1173 185 56 3 chr18_random 992969 993256 -788729 - L1M4 LINE L1 -837 5309 5008 400 232 0 10 chr18_random 994561 994660 -787325 + MER5A DNA MER1_type 6 103 -86 201 28 28 56 chr18_random 1000454 1000490 -781495 + (TAAAAA)n Simple_repeat Simple_repeat 2 36 0 22 0 0 0 chr18_random 1002552 1002574 -779411 + AT_rich Low_complexity Low_complexity 1 22 0 2174 64 4 4 chr18_random 1002920 1003184 -778801 + AluY SINE Alu 1 264 -47 261 0 0 0 chr18_random 1003818 1003847 -778138 + (TC)n Simple_repeat Simple_repeat 2 30 0 198 0 0 0 chr18_random 1003846 1003868 -778117 + (TA)n Simple_repeat Simple_repeat 1 22 0 * 204 254 63 0 chr18_random 1006365 1006428 -775557 - L2 LINE L2 -20 3293 3227 252 0 0 0 chr18_random 1008072 1008100 -773885 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 1398 227 82 21 chr18_random 1011224 1011700 -770285 + MLT1D LTR MaLR 1 505 0 467 261 11 11 chr18_random 1012409 1012589 -769396 + (TA)n Simple_repeat Simple_repeat 1 180 0 1251 95 6 0 chr18_random 1014846 1015014 -766971 + L1PA5 LINE L1 5977 6145 -9 289 252 54 17 chr18_random 1015641 1015784 -766201 - MIR SINE MIR -62 146 15 320 248 93 31 chr18_random 1416523 1416684 -365301 + L1MA9 LINE L1 5583 5753 -418 204 40 0 0 chr18_random 1416742 1416767 -365218 + (TA)n Simple_repeat Simple_repeat 1 25 0 842 180 17 0 chr18_random 1416842 1417020 -364965 + L1M4 LINE L1 4748 4928 -1218 352 202 16 23 chr18_random 1417028 1417157 -364828 + (TA)n Simple_repeat Simple_repeat 1 128 0 2314 175 8 8 chr18_random 1417162 1417641 -364344 + L1MA9 LINE L1 5782 6260 -52 34 72 0 0 chr18_random 1417732 1417801 -364184 + AT_rich Low_complexity Low_complexity 1 69 0 3344 211 75 43 chr18_random 1417825 1419054 -362931 + L1ME LINE L1 4233 5492 -674 195 204 0 0 chr18_random 1419144 1419193 -362792 + GA-rich Low_complexity Low_complexity 1 49 0 24 0 0 0 chr18_random 1420163 1420187 -361798 + AT_rich Low_complexity Low_complexity 1 24 0 1856 164 0 7 chr18_random 1420212 1420499 -361486 - AluJb SINE Alu -27 285 1 34 42 0 0 chr18_random 1420502 1420550 -361435 + AT_rich Low_complexity Low_complexity 1 48 0 388 67 17 0 chr18_random 1420550 1420610 -361375 - L1PB1 LINE L1 0 6151 6091 261 171 0 0 chr18_random 1420618 1420659 -361326 - L2 LINE L2 -15 3298 3258 21 0 0 0 chr18_random 1420659 1420680 -361305 + AT_rich Low_complexity Low_complexity 1 21 0 248 105 0 0 chr18_random 1420711 1420749 -361236 + L1P LINE L1 3772 3809 -2337 4525 119 4 1 chr18_random 1420751 1421439 -360546 + HERVK22 LTR ERVK 3247 3936 -2901 1509 108 0 0 chr18_random 1421459 1421671 -360314 - HERVK22 LTR ERVK 0 6837 6626 6933 94 7 0 chr18_random 1421677 1422664 -359321 - HERVK22 LTR ERVK -3597 3240 2247 6165 126 16 4 chr18_random 1422655 1423623 -358362 - HERVK22 LTR ERVK -5856 981 3 * 2535 156 13 19 chr18_random 1423625 1424086 -357899 - LTR22A LTR ERVK 0 458 1 259 256 33 56 chr18_random 1424175 1424265 -357720 + L2 LINE L2 3185 3272 0 211 311 22 22 chr18_random 1424816 1424906 -357079 + MIR3 SINE MIR 86 175 -33 22 35 0 0 chr18_random 1425353 1425382 -356603 + AT_rich Low_complexity Low_complexity 1 29 0 1109 121 141 0 chr18_random 1426240 1426438 -355547 + L1PB1 LINE L1 5427 5652 -499 5427 115 21 44 chr18_random 1426440 1427478 -354507 + Harlequin LTR ERV1 439 1527 -3488 1136 128 9 0 chr18_random 1427478 1427692 -354293 + L1PA8A LINE L1 5594 5815 -316 197 260 0 14 chr18_random 1427705 1427778 -354207 + (TA)n Simple_repeat Simple_repeat 1 72 0 1194 114 5 62 chr18_random 1427780 1427990 -353995 + Harlequin LTR ERV1 1 198 -6698 198 0 0 0 chr18_random 1428013 1428035 -353950 + (CA)n Simple_repeat Simple_repeat 2 23 0 1108 76 1 0 chr18_random 1428035 1428196 -353789 + L1PB1 LINE L1 5793 5954 -202 195 188 0 0 chr18_random 1428199 1428247 -353738 + (TA)n Simple_repeat Simple_repeat 1 48 0 2662 73 5 8 chr18_random 1428268 1428636 -353349 + L1PB2 LINE L1 5785 6151 0 187 279 0 0 chr18_random 1428982 1429025 -352960 + L2 LINE L2 3221 3263 -9 352 338 139 43 chr18_random 1429192 1429912 -352073 + L2 LINE L2 165 953 -2361 2240 147 3 11 chr18_random 1430187 1430555 -351430 + MLT1A1 LTR MaLR 1 365 0 267 31 0 0 chr18_random 1431164 1431196 -350789 + (T)n Simple_repeat Simple_repeat 1 32 0 2074 91 14 7 chr18_random 1431689 1431985 -350000 + L1PA10 LINE L1 5869 6166 -2 265 324 73 39 chr18_random 1431990 1432249 -349736 - L2 LINE L2 -1390 1924 1657 1468 256 105 50 chr18_random 1432438 1433202 -348783 - L2 LINE L2 -100 3213 2387 1022 213 71 0 chr18_random 1433207 1433461 -348524 + LTR52 LTR ERVL 68 339 -82 1233 279 47 23 chr18_random 1433523 1433953 -348032 - L2 LINE L2 -924 2390 1951 225 375 11 0 chr18_random 1435038 1435126 -346859 - L2 LINE L2 -45 3268 3180 300 265 189 15 chr18_random 1435176 1435308 -346677 + MIR SINE MIR 34 188 -74 1732 183 24 0 chr18_random 1437129 1437418 -344567 + AluJo SINE Alu 1 296 -16 189 323 192 0 chr18_random 1437500 1437596 -344389 + MER5A DNA MER1_type 74 176 -2 24 53 0 0 chr18_random 1438085 1438123 -343862 + AT_rich Low_complexity Low_complexity 1 38 0 1759 155 84 16 chr18_random 1438306 1438673 -343312 - Tigger2a DNA MER2_type -41 393 2 995 231 39 62 chr18_random 1438927 1439282 -342703 - L1ME3A LINE L1 0 6170 5824 231 222 0 0 chr18_random 1439301 1439355 -342630 - L1ME3A LINE L1 -1206 4940 4887 207 315 0 0 chr18_random 1439661 1439715 -342270 + GA-rich Low_complexity Low_complexity 3 56 0 1395 109 51 200 chr18_random 1439770 1440284 -341701 - LTR23 LTR ERV1 0 437 1 400 277 105 70 chr18_random 1440289 1440725 -341260 - L1MEc LINE L1 -4727 1488 1081 2679 98 3 16 chr18_random 1440729 1441108 -340877 + THE1C LTR MaLR 1 374 -1 8784 115 90 9 chr18_random 1441109 1442571 -339414 + THE1C-int LTR MaLR 1 1580 0 2275 109 62 14 chr18_random 1442571 1442929 -339056 + THE1C LTR MaLR 1 375 0 3625 122 53 3 chr18_random 1442933 1443514 -338471 - MER4B LTR ERV1 0 610 1 2036 130 43 16 chr18_random 1443514 1443882 -338103 - MER4B-int LTR ERV1 0 6758 6381 2038 139 0 0 chr18_random 1443885 1444179 -337806 + AluSc SINE Alu 1 294 -15 5526 124 28 34 chr18_random 1444286 1445316 -336669 - MER4B-int LTR ERV1 -421 6337 4945 8210 130 39 42 chr18_random 1445321 1448254 -333731 - MER4B-int LTR ERV1 -3530 3228 201 1302 214 51 64 chr18_random 1448277 1448518 -333467 - MER4B-int LTR ERV1 -4119 2212 1976 2179 113 0 0 chr18_random 1448518 1448810 -333175 - AluY SINE Alu -19 292 1 1302 214 51 64 chr18_random 1448810 1448941 -333044 - MER4B-int LTR ERV1 -4355 1976 1845 331 127 0 63 chr18_random 1448979 1449058 -332927 - MER4B-int LTR ERV1 -5774 824 751 2274 147 70 37 chr18_random 1449095 1449631 -332354 - MER4B-int LTR ERV1 -5991 607 1 1981 117 16 0 chr18_random 1449634 1449941 -332044 - MER4B LTR ERV1 0 610 299 872 140 14 0 chr18_random 1449941 1450084 -331901 + AluSg/x SINE Alu 154 298 -12 1505 118 125 14 chr18_random 1450084 1450363 -331622 - MER4B LTR ERV1 -300 310 1 32 43 0 0 chr18_random 1450381 1450427 -331558 + AT_rich Low_complexity Low_complexity 1 46 0 412 228 79 9 chr18_random 1450888 1451002 -330983 + L2 LINE L2 3192 3313 0 383 347 89 4 chr18_random 1451015 1451240 -330745 + L1ME LINE L1 5417 5660 -502 414 375 40 17 chr18_random 1451306 1451605 -330380 - L2 LINE L2 -424 2890 2585 320 164 0 0 chr18_random 1453174 1453241 -328744 - L1MB7 LINE L1 -1 6183 6117 188 191 64 0 chr18_random 1453397 1453444 -328541 + MIR SINE MIR 140 189 -73 1398 165 66 7 chr18_random 1453920 1454193 -327792 - L1PA16 LINE L1 -9 6157 5869 280 276 62 0 chr18_random 1454338 1454483 -327502 - L1PA16 LINE L1 -330 5836 5683 205 386 38 16 chr18_random 1454495 1454679 -327306 + L3 LINE CR1 1287 1474 -103 1667 178 4 7 chr18_random 1454776 1455045 -326940 + AluJb SINE Alu 24 291 -21 359 288 16 32 chr18_random 1455124 1455249 -326736 + L2 LINE L2 3190 3312 -1 264 59 0 0 chr18_random 1456006 1456040 -325945 + (A)n Simple_repeat Simple_repeat 1 34 0 202 348 0 34 chr18_random 1457212 1457330 -324655 + MIR3 SINE MIR 95 208 0 222 239 44 9 chr18_random 1457968 1458081 -323904 + (TA)n Simple_repeat Simple_repeat 2 118 0 * 319 260 0 62 chr18_random 1458075 1458171 -323814 + L1MC4 LINE L1 6614 6703 -1339 278 186 47 35 chr18_random 1458172 1458258 -323727 + (TA)n Simple_repeat Simple_repeat 1 87 0 1018 261 95 91 chr18_random 1458436 1459615 -322370 - L1MC5 LINE L1 -36 7925 6742 1796 141 28 7 chr18_random 1459657 1459947 -322038 - AluSx SINE Alu 0 312 17 384 341 30 0 chr18_random 1460349 1460481 -321504 - MIR3 SINE MIR -25 183 48 805 241 47 17 chr18_random 1460650 1460882 -321103 - MIR SINE MIR -14 248 10 325 309 65 7 chr18_random 1460970 1461109 -320876 - MIR SINE MIR -104 158 12 2278 172 98 7 chr18_random 1461698 1462157 -319828 + MLT1D LTR MaLR 1 501 -4 1896 169 10 0 chr18_random 1462338 1462673 -319312 - AluJo SINE Alu 0 338 1 371 202 59 42 chr18_random 1463985 1464104 -317881 + L1ME LINE L1 5354 5474 -688 458 301 97 10 chr18_random 1464179 1464385 -317600 + L1ME LINE L1 5494 5717 -445 2526 129 0 0 chr18_random 1464403 1464767 -317218 - THE1B LTR MaLR 0 364 1 247 242 21 11 chr18_random 1466365 1466460 -315525 + (TA)n Simple_repeat Simple_repeat 1 96 0 250 233 41 14 chr18_random 1466583 1466656 -315329 + L1ME LINE L1 5517 5591 -530 279 302 42 21 chr18_random 1467058 1467154 -314831 + MIR SINE MIR 57 154 -108 21 57 0 0 chr18_random 1467244 1467279 -314706 + AT_rich Low_complexity Low_complexity 1 35 0 2817 132 9 2 chr18_random 1467859 1468283 -313702 + MSTA LTR MaLR 1 427 -1 2216 118 0 7 chr18_random 1468408 1468712 -313273 - AluSg1 SINE Alu -5 304 3 4673 154 20 28 chr18_random 1469182 1471024 -310961 + L1MA7 LINE L1 4490 6295 -5 718 241 89 75 chr18_random 1471184 1471666 -310319 - L1ME3A LINE L1 0 6170 5682 300 307 55 31 chr18_random 1471667 1471830 -310155 - L1M4 LINE L1 -3849 2533 2367 25 51 0 0 chr18_random 1471910 1471949 -310036 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr18_random 1472187 1472209 -309776 + AT_rich Low_complexity Low_complexity 1 22 0 449 305 23 29 chr18_random 1472311 1472530 -309455 - HAL1 LINE L1 -826 1917 1532 2045 129 0 16 chr18_random 1472547 1472850 -309135 - AluSx SINE Alu -14 298 1 24 67 0 0 chr18_random 1474615 1474660 -307325 + AT_rich Low_complexity Low_complexity 1 45 0 6036 105 6 1 chr18_random 1474760 1475647 -306338 - L1P LINE L1 -1483 4663 3773 2067 102 3 67 chr18_random 1475647 1475991 -305994 + L1PA8A LINE L1 5810 6131 0 4636 36 17 22 chr18_random 1476388 1476976 -305009 - L1PA3 LINE L1 0 6155 5571 2119 108 3 14 chr18_random 1477089 1477384 -304601 - AluSx SINE Alu -20 292 1 212 0 36 0 chr18_random 1477554 1477582 -304403 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 315 265 114 8 chr18_random 1477706 1477838 -304147 - L1ME4a LINE L1 -9 6112 5967 309 26 0 0 chr18_random 1478138 1478176 -303809 + (CA)n Simple_repeat Simple_repeat 2 39 0 446 285 92 65 chr18_random 1478258 1478483 -303502 - L1M4 LINE L1 -1893 4253 4013 2314 141 11 3 chr18_random 1478483 1478844 -303141 - THE1B LTR MaLR 0 364 1 446 285 92 65 chr18_random 1478844 1478986 -302999 - L1M4 LINE L1 -2133 4013 3876 28 0 0 0 chr18_random 1479582 1479610 -302375 + AT_rich Low_complexity Low_complexity 1 28 0 184 283 78 102 chr18_random 1481351 1481517 -300468 - MIR3 SINE MIR -3 205 44 1161 193 29 38 chr18_random 1482322 1482560 -299425 - AluJo SINE Alu -76 236 1 227 286 41 10 chr18_random 1482777 1482875 -299110 - Tigger2 DNA MER2_type -1478 1240 1140 1470 400 47 10 chr18_random 1483684 1484177 -297808 - MLT1J LTR MaLR 0 511 1 226 316 25 13 chr18_random 1484524 1484603 -297382 - MIR3 SINE MIR -12 196 117 871 283 41 12 chr18_random 1484738 1484982 -297003 + MIR SINE MIR 7 257 -5 477 136 19 0 chr18_random 1485023 1485178 -296807 - L1PA15 LINE L1 -2 6163 5954 21 36 0 0 chr18_random 1485770 1485798 -296187 + AT_rich Low_complexity Low_complexity 1 28 0 24 0 0 0 chr18_random 1485807 1485831 -296154 + AT_rich Low_complexity Low_complexity 1 24 0 233 267 0 0 chr18_random 1486034 1486079 -295906 + L2 LINE L2 3266 3310 -3 384 171 0 0 chr18_random 1486123 1486199 -295786 - MLT1D LTR MaLR 0 505 430 227 220 0 0 chr18_random 1486231 1486281 -295704 - MLT1D LTR MaLR -158 347 298 24 77 0 0 chr18_random 1486625 1486677 -295308 + AT_rich Low_complexity Low_complexity 1 52 0 38105 43 5 0 chr18_random 1486677 1492181 -289804 - L1PA5 LINE L1 -7 6147 623 758 45 0 0 chr18_random 1492179 1492267 -289718 - L1PA5 LINE L1 -6048 98 11 * 813 138 0 36 chr18_random 1492759 1492897 -289088 - FLAM_C SINE Alu 0 133 1 1712 241 81 52 chr18_random 1492975 1493596 -288389 - L1ME3 LINE L1 -71 6091 5453 1759 173 0 22 chr18_random 1493673 1494027 -287958 + AluJo SINE Alu 3 312 0 1768 156 29 38 chr18_random 1494460 1494774 -287211 + AluJb SINE Alu 2 312 0 1997 83 25 11 chr18_random 1494855 1495133 -286852 + AluSg SINE Alu 14 295 -15 2363 93 0 3 chr18_random 1495942 1496253 -285732 - AluY SINE Alu -1 310 1 21 89 0 0 chr18_random 1497999 1498055 -283930 + AT_rich Low_complexity Low_complexity 1 56 0 286 306 36 18 chr18_random 1498575 1498686 -283299 + MER5A DNA MER1_type 74 186 -3 2369 85 0 0 chr18_random 1499159 1499454 -282531 + AluY SINE Alu 1 295 -16 180 272 87 48 chr18_random 1499797 1499900 -282085 + L2 LINE L2 2934 3040 -232 227 284 39 10 chr18_random 1501274 1501376 -280609 + L1ME LINE L1 5542 5646 -524 81 11 0 0 chr18_random 1501383 1501471 -280514 + AT_rich Low_complexity Low_complexity 1 88 0 366 362 81 8 chr18_random 1502007 1502242 -279743 - L2 LINE L2 -430 2884 2633 22 35 0 0 chr18_random 1502372 1502401 -279584 + AT_rich Low_complexity Low_complexity 1 29 0 820 145 47 70 chr18_random 1504113 1504285 -277700 - L1MC1 LINE L1 0 6333 6166 623 215 0 0 chr18_random 1504425 1504546 -277439 + FLAM_A SINE Alu 4 124 -9 736 286 106 7 chr18_random 1504559 1504860 -277125 - MER46C DNA MER2_type 0 338 8 457 286 69 46 chr18_random 1504873 1505090 -276895 + L3 LINE CR1 1278 1499 -78 252 281 22 45 chr18_random 1505262 1505351 -276634 + L2 LINE L2 3213 3299 -14 2257 107 7 0 chr18_random 1505358 1505656 -276329 - AluSx SINE Alu -12 300 1 29 28 0 0 chr18_random 1506930 1506966 -275019 + AT_rich Low_complexity Low_complexity 1 36 0 2014 137 12 6 chr18_random 1507139 1507482 -274503 - L1MB3 LINE L1 -1 6182 5838 21 0 0 0 chr18_random 1508986 1509007 -272978 + AT_rich Low_complexity Low_complexity 1 21 0 25 31 0 0 chr18_random 1510350 1510382 -271603 + AT_rich Low_complexity Low_complexity 1 32 0 332 295 116 12 chr18_random 1510549 1510722 -271263 - MIR SINE MIR 0 262 72 1132 251 0 31 chr18_random 1510794 1511112 -270873 + AluJo SINE Alu 1 309 0 331 255 105 39 chr18_random 1511170 1511323 -270662 - HAL1 LINE L1 -79 2428 2266 238 327 131 28 chr18_random 1511603 1511769 -270216 + MIR3 SINE MIR 3 184 -24 207 306 99 70 chr18_random 1512349 1512591 -269394 - L2 LINE L2 -1 3312 3064 1750 196 0 3 chr18_random 1513212 1513523 -268462 - AluJo SINE Alu -2 310 1 833 189 6 33 chr18_random 1513528 1513708 -268277 + MER5B DNA MER1_type 4 178 0 205 341 16 49 chr18_random 1513708 1513831 -268154 - MIR3 SINE MIR -48 160 42 1804 170 43 3 chr18_random 1514384 1514713 -267272 + L1MC1 LINE L1 5986 6327 -6 5799 62 14 4 chr18_random 1515654 1516412 -265573 + MER4E LTR ERV1 1 766 0 3090 155 29 0 chr18_random 1516627 1517230 -264755 + L1M2 LINE L1 5158 5782 -530 234 0 0 0 chr18_random 1517234 1517260 -264725 + (TA)n Simple_repeat Simple_repeat 2 27 0 2558 87 10 3 chr18_random 1517519 1517900 -264085 - L1PA13 LINE L1 -204 5959 5535 1029 148 47 0 chr18_random 1517901 1518070 -263915 - MER47A DNA MER2_type -189 177 1 1219 159 85 128 chr18_random 1518070 1518492 -263493 - L1 LINE L1 -1693 4453 4050 * 1649 165 22 22 chr18_random 1518488 1519213 -262772 + L1MA7 LINE L1 5405 6285 -6 624 252 101 62 chr18_random 1519262 1519887 -262098 - L1ME LINE L1 -302 5819 5176 742 191 14 0 chr18_random 1519896 1520037 -261948 - FLAM_C SINE Alu 0 143 1 192 77 0 0 chr18_random 1520091 1520117 -261868 + (T)n Simple_repeat Simple_repeat 1 26 0 1114 190 0 49 chr18_random 1520276 1520502 -261483 - AluJb SINE Alu -15 297 83 27 102 0 0 chr18_random 1521830 1521889 -260096 + AT_rich Low_complexity Low_complexity 1 59 0 305 327 57 24 chr18_random 1522043 1522291 -259694 + L1MC/D LINE L1 5577 5832 -1976 318 98 0 0 chr18_random 1522674 1522725 -259260 + (TTCTC)n Simple_repeat Simple_repeat 1 51 0 2148 123 7 3 chr18_random 1522725 1523035 -258950 - AluSq SINE Alu -2 311 1 1010 156 25 0 chr18_random 1523786 1523946 -258039 + FRAM SINE Alu 1 156 -20 2355 61 10 0 chr18_random 1523951 1524246 -257739 + AluY SINE Alu 1 298 -13 2157 112 0 0 chr18_random 1524670 1524955 -257030 + AluSg SINE Alu 3 287 -23 209 29 0 57 chr18_random 1524966 1525001 -256984 + (CAAAAA)n Simple_repeat Simple_repeat 4 36 0 30 0 0 0 chr18_random 1525678 1525708 -256277 + AT_rich Low_complexity Low_complexity 1 30 0 1748 170 7 0 chr18_random 1525708 1525990 -255995 - AluJb SINE Alu -28 284 1 2207 101 3 3 chr18_random 1526303 1526601 -255384 + AluY SINE Alu 1 298 -13 1733 196 120 45 chr18_random 1526837 1527092 -254893 + Charlie1 DNA MER1_type 1728 1962 -799 2090 81 0 14 chr18_random 1527092 1527388 -254597 - L1PA7 LINE L1 0 6154 5863 1733 196 120 45 chr18_random 1527388 1527759 -254226 + Charlie1 DNA MER1_type 1962 2401 -360 594 85 128 0 chr18_random 1527771 1527865 -254120 - MLT2A2 LTR ERVL -347 106 1 1015 219 62 50 chr18_random 1527915 1528197 -253788 + Charlie1 DNA MER1_type 2351 2641 -120 2096 123 0 0 chr18_random 1528197 1528489 -253496 - AluSx SINE Alu -8 304 13 1015 219 62 50 chr18_random 1528489 1528590 -253395 + Charlie1 DNA MER1_type 2641 2739 -22 1677 209 90 73 chr18_random 1528896 1529441 -252544 - MLT2B3 LTR ERVL 0 554 1 762 69 0 0 chr18_random 1529517 1529618 -252367 + (TTCTC)n Simple_repeat Simple_repeat 4 104 0 1596 199 0 4 chr18_random 1529618 1529899 -252086 - AluJb SINE Alu -30 282 3 29 70 0 0 chr18_random 1530632 1530689 -251296 + AT_rich Low_complexity Low_complexity 1 57 0 385 261 131 20 chr18_random 1531055 1531208 -250777 + MLT1J1 LTR MaLR 58 227 -219 254 192 19 0 chr18_random 1531296 1531348 -250637 + MLT1J2 LTR MaLR 345 397 -53 489 321 60 80 chr18_random 1531473 1531925 -250060 - L2 LINE L2 0 3313 2871 255 61 0 0 chr18_random 1533498 1533531 -248454 + (CA)n Simple_repeat Simple_repeat 1 33 0 466 268 127 20 chr18_random 1533621 1533920 -248065 - L1MC4 LINE L1 -1 8041 7711 1230 198 43 47 chr18_random 1534849 1535107 -246878 + AluJo SINE Alu 17 273 -39 1558 175 17 0 chr18_random 1535519 1535811 -246174 + L1M4 LINE L1 5515 5811 -367 506 286 43 9 chr18_random 1536663 1536894 -245091 + L1ME4a LINE L1 5619 5857 -264 2474 101 11 16 chr18_random 1537076 1537451 -244534 + THE1C LTR MaLR 3 375 0 546 229 277 5 chr18_random 1537718 1537906 -244079 - MIR SINE MIR -21 241 3 407 214 69 38 chr18_random 1538070 1538229 -243756 + L1ME4a LINE L1 5945 6108 -13 31831 38 6 2 chr18_random 1538477 1544606 -237379 - L1PA3 LINE L1 -3 6152 1 364 307 0 0 chr18_random 1546516 1546617 -235368 + L3 LINE CR1 1374 1474 -103 1647 155 82 16 chr18_random 1547806 1548122 -233863 + MER1B DNA MER1_type 1 337 0 582 253 152 55 chr18_random 1548666 1548903 -233082 + MIR SINE MIR 3 262 0 266 287 42 84 chr18_random 1548897 1549040 -232945 + L2 LINE L2 3175 3311 -2 * 360 125 0 0 chr18_random 1549108 1549164 -232821 - MSTA LTR MaLR 0 428 373 804 133 0 0 chr18_random 1549164 1549284 -232701 + AluSg/x SINE Alu 193 312 0 225 286 0 0 chr18_random 1549285 1549334 -232651 - MIR SINE MIR -160 102 54 236 225 28 56 chr18_random 1550779 1550850 -231135 + MIR SINE MIR 51 119 -143 302 281 167 0 chr18_random 1551171 1551267 -230718 + HAL1 LINE L1 671 782 -1725 1158 119 10 42 chr18_random 1551288 1551481 -230504 - AluSx SINE Alu -13 299 113 764 123 0 0 chr18_random 1551581 1551687 -230298 - AluSx SINE Alu -207 106 1 2114 120 13 0 chr18_random 1551715 1552016 -229969 + AluSg SINE Alu 1 305 -5 273 357 0 9 chr18_random 1552032 1552144 -229841 + L2 LINE L2 3197 3307 -6 2327 63 7 3 chr18_random 1553002 1553289 -228696 + AluY SINE Alu 1 288 -23 4337 208 53 43 chr18_random 1555137 1556348 -225637 - L1MD2 LINE L1 -3 6356 5114 2137 107 7 13 chr18_random 1556348 1556648 -225337 + AluSq SINE Alu 1 298 -15 4337 208 53 43 chr18_random 1556648 1556975 -225010 - L1MD2 LINE L1 -1245 5114 4792 247 261 14 0 chr18_random 1557224 1557293 -224692 + L1ME3A LINE L1 4713 4782 -1364 343 284 50 64 chr18_random 1558279 1558497 -223488 - L1ME LINE L1 -451 5670 5456 23 0 0 0 chr18_random 1559052 1559075 -222910 + AT_rich Low_complexity Low_complexity 1 23 0 2091 99 6 16 chr18_random 1559843 1560155 -221830 + AluSx SINE Alu 1 309 -3 259 221 29 29 chr18_random 1560255 1560323 -221662 - Charlie4 DNA MER1_type -6 1955 1888 2032 106 0 4 chr18_random 1560762 1561035 -220950 + AluSg SINE Alu 1 272 -38 261 98 0 0 chr18_random 1561035 1561076 -220909 + (TCTA)n Simple_repeat Simple_repeat 4 44 0 1223 214 56 50 chr18_random 1561621 1561769 -220216 - MER58B DNA MER1_type -2096 324 178 2165 108 35 0 chr18_random 1561769 1562055 -219930 + AluSx SINE Alu 1 296 -16 1223 214 56 50 chr18_random 1562055 1562228 -219757 - MER58B DNA MER1_type -2242 178 1 343 326 184 20 chr18_random 1562228 1562512 -219473 - MLT1J2 LTR MaLR -52 398 67 1754 138 71 0 chr18_random 1562709 1562991 -218994 + AluSx SINE Alu 1 302 -10 2441 58 0 3 chr18_random 1563228 1563522 -218463 + AluY SINE Alu 5 297 -14 21 36 0 0 chr18_random 1564155 1564183 -217802 + AT_rich Low_complexity Low_complexity 1 28 0 1574 259 69 61 chr18_random 1567360 1568352 -213633 + L1ME3A LINE L1 5045 6036 -134 291 281 66 20 chr18_random 1568447 1568643 -213342 - L1ME LINE L1 -2320 5488 5284 21 57 0 0 chr18_random 1568698 1568733 -213252 + AT_rich Low_complexity Low_complexity 1 35 0 247 282 78 28 chr18_random 1568838 1568980 -213005 - L1ME LINE L1 -1143 5003 4855 1912 118 0 7 chr18_random 1569933 1570205 -211780 - AluSg1 SINE Alu -2 307 38 349 256 80 7 chr18_random 1570889 1571026 -210959 - MER110 LTR ERV1 -179 312 166 387 272 61 0 chr18_random 1572040 1572154 -209831 + MIR3 SINE MIR 87 207 -1 1840 27 0 9 chr18_random 1572568 1572793 -209192 + L1PA4 LINE L1 5933 6155 0 490 296 15 8 chr18_random 1573050 1573182 -208803 - MIR3 SINE MIR -4 204 72 227 320 28 69 chr18_random 1574241 1574371 -207614 - L2 LINE L2 -459 2855 2738 1990 126 40 65 chr18_random 1574371 1574743 -207242 + THE1B LTR MaLR 2 364 0 227 320 28 69 chr18_random 1574743 1574859 -207126 - L2 LINE L2 -576 2738 2619 228 276 10 82 chr18_random 1575275 1575373 -206612 + L1ME4a LINE L1 5550 5640 -2168 716 243 160 0 chr18_random 1575486 1575667 -206318 - MER58A DNA MER1_type -13 211 2 225 235 70 17 chr18_random 1575806 1575921 -206064 + L1ME4a LINE L1 5999 6119 -2 2036 125 0 3 chr18_random 1576184 1576473 -205512 - AluSg SINE Alu -22 288 1 461 307 100 45 chr18_random 1576977 1577286 -204699 - L1ME3A LINE L1 -238 5915 5590 398 277 48 0 chr18_random 1577286 1577452 -204533 - L1ME3A LINE L1 -2660 3469 3296 225 264 42 0 chr18_random 1577460 1577532 -204453 - L1MA10 LINE L1 -1 6333 6259 647 285 105 48 chr18_random 1577533 1577951 -204034 + LTR16B LTR ERVL 2 443 -21 846 259 23 36 chr18_random 1577997 1578360 -203625 - L1ME1 LINE L1 -81 6085 5734 578 233 48 27 chr18_random 1578492 1578638 -203347 - L1ME1 LINE L1 -457 5709 5561 373 290 209 18 chr18_random 1578679 1579004 -202981 - L1ME3A LINE L1 -2936 3193 2783 198 0 0 0 chr18_random 1579004 1579026 -202959 + (TA)n Simple_repeat Simple_repeat 2 23 0 373 290 209 18 chr18_random 1579026 1579083 -202902 - L1ME3A LINE L1 -3346 2783 2738 918 130 0 8 chr18_random 1579087 1579218 -202767 + AluJb SINE Alu 1 130 -182 1996 155 0 0 chr18_random 1579256 1579552 -202433 - AluJb SINE Alu -16 296 1 454 279 18 50 chr18_random 1579814 1580097 -201888 - L1ME3A LINE L1 -3720 2409 2136 504 308 50 23 chr18_random 1580670 1581164 -200821 - L1MEd LINE L1 -4814 1315 968 4323 63 4 0 chr18_random 1581433 1581985 -200000 - L1PA10 LINE L1 0 6168 5615