316 200 0 0 chr17 1 56 -85438424 - Alu SINE Alu -247 55 1 2325 82 10 0 chr17 66 371 -85438109 - AluSx SINE Alu -4 308 1 2014 121 3 16 chr17 684 851 -85437629 - AluJb SINE Alu -11 301 138 2138 105 3 7 chr17 851 1156 -85437324 - AluY SINE Alu -7 304 1 2014 121 3 16 chr17 1156 1293 -85437187 - AluJb SINE Alu -174 138 1 1874 101 0 8 chr17 1441 1698 -85436782 - AluSx SINE Alu -57 255 1 223 278 0 0 chr17 1990 2044 -85436436 - L2 LINE L2 -2 3270 3217 2232 106 3 0 chr17 2215 2516 -85435964 + AluSx SINE Alu 1 302 -10 210 333 42 0 chr17 3102 3198 -85435282 + MIR3 SINE MIR 109 208 0 485 294 63 50 chr17 3461 3517 -85434963 - MIR SINE MIR 0 262 208 2202 91 0 10 chr17 3517 3825 -85434655 - AluY SINE Alu -6 305 1 485 294 63 50 chr17 3825 3989 -85434491 - MIR SINE MIR -54 208 39 1523 97 0 18 chr17 4525 4752 -85433728 - AluSg SINE Alu -87 223 1 1310 130 0 5 chr17 5897 6097 -85432383 + AluSq SINE Alu 30 228 -85 2390 54 0 0 chr17 6797 7095 -85431385 - AluY SINE Alu -13 298 1 2368 67 13 13 chr17 7342 7518 -85430962 - AluSx SINE Alu 0 312 134 2051 120 3 7 chr17 7518 7826 -85430654 - AluSp SINE Alu -6 307 1 2368 67 13 13 chr17 7826 7961 -85430519 - AluSx SINE Alu -177 135 1 1099 178 30 26 chr17 8073 8127 -85430353 + AluJo SINE Alu 78 130 -182 2381 67 3 3 chr17 8127 8427 -85430053 + AluSp SINE Alu 1 300 -13 1099 178 30 26 chr17 8427 8603 -85429877 + AluJo SINE Alu 130 309 -3 1680 90 0 25 chr17 9739 9983 -85428497 - AluSg/x SINE Alu -5 307 70 1633 129 4 0 chr17 10083 10323 -85428157 + AluSx SINE Alu 54 294 -18 208 293 0 0 chr17 10460 10518 -85427962 - L2 LINE L2 -638 2676 2619 837 141 7 28 chr17 10526 10668 -85427812 + AluJo SINE Alu 1 139 -173 1607 148 0 76 chr17 10670 10811 -85427669 + AluJo SINE Alu 5 110 -202 2460 42 0 0 chr17 10811 11100 -85427380 + AluY SINE Alu 5 293 -18 1607 148 0 76 chr17 11100 11275 -85427205 + AluJo SINE Alu 110 297 -15 293 174 153 41 chr17 11401 11418 -85427062 + MER5A DNA MER1_type 1 15 -174 1963 118 20 14 chr17 11418 11715 -85426765 + AluSx SINE Alu 3 301 -11 293 174 153 41 chr17 11715 11795 -85426685 + MER5A DNA MER1_type 15 109 -80 980 98 0 0 chr17 12385 12517 -85425963 - AluSq/x SINE Alu -181 132 1 228 160 9 66 chr17 13843 13949 -85424531 + GA-rich Low_complexity Low_complexity 2 101 0 264 287 46 11 chr17 14105 14192 -85424288 + L1MC/D LINE L1 5576 5665 -2143 479 204 0 11 chr17 14195 14288 -85424192 - MER8 DNA MER2_type 0 239 148 2172 100 0 7 chr17 14289 14588 -85423892 + AluSx SINE Alu 1 297 -15 997 67 0 30 chr17 14761 14896 -85423584 + AluY SINE Alu 1 131 -180 2117 84 40 7 chr17 14898 15195 -85423285 + AluY SINE Alu 1 307 -4 285 248 28 9 chr17 15200 15309 -85423171 + L1M4 LINE L1 4499 4609 -1537 2038 112 7 0 chr17 16100 16396 -85422084 - AluSx SINE Alu -14 298 1 1057 81 7 0 chr17 16738 16874 -85421606 - AluSq/x SINE Alu -176 137 1 2384 67 0 16 chr17 16986 17302 -85421178 - AluY SINE Alu 0 311 1 275 158 0 4 chr17 17302 17361 -85421119 - Alu SINE Alu -255 44 1 21 0 0 0 chr17 17630 17651 -85420829 + AT_rich Low_complexity Low_complexity 1 21 0 1230 64 0 0 chr17 18518 18675 -85419805 + AluSq SINE Alu 1 157 -156 632 256 12 12 chr17 19023 19183 -85419297 - MER5A DNA MER1_type -29 160 1 2127 111 0 0 chr17 19307 19604 -85418876 - AluSx SINE Alu -15 297 1 2487 53 3 0 chr17 19609 19911 -85418569 - AluY SINE Alu -8 303 1 23 0 0 0 chr17 19911 19934 -85418546 + AT_rich Low_complexity Low_complexity 1 23 0 804 147 0 0 chr17 19989 20118 -85418362 - AluSc SINE Alu -5 304 176 867 68 17 0 chr17 20219 20337 -85418143 + AluY SINE Alu 181 300 -11 243 88 0 0 chr17 20717 20751 -85417729 + (GGGAGA)n Simple_repeat Simple_repeat 3 36 0 712 75 0 0 chr17 20827 20921 -85417559 - AluY SINE Alu -14 297 204 1792 89 0 0 chr17 20921 21156 -85417324 - AluSc SINE Alu -74 235 1 388 244 16 11 chr17 21443 21569 -85416911 + MIR SINE MIR 104 229 -33 375 192 83 154 chr17 22071 22140 -85416340 - MER2 DNA MER2_type 0 345 273 2129 112 0 0 chr17 22140 22444 -85416036 + AluSx SINE Alu 1 304 -8 1890 118 13 41 chr17 22445 22759 -85415721 + AluSx SINE Alu 1 305 -7 375 192 83 154 chr17 22759 22927 -85415553 - MER2 DNA MER2_type -71 274 123 438 148 28 46 chr17 22928 23036 -85415444 + L1MA4 LINE L1 6195 6300 0 445 235 52 52 chr17 23073 23209 -85415271 - MER2 DNA MER2_type -209 136 1 201 231 62 0 chr17 23258 23323 -85415157 - MER5B DNA MER1_type -106 72 4 1906 144 3 7 chr17 23870 24169 -85414311 - AluSx SINE Alu -14 298 1 311 256 31 62 chr17 24171 24300 -85414180 - HAL1 LINE L1 -583 1924 1800 780 263 85 18 chr17 25007 25288 -85413192 - MER102b DNA MER1_type 0 341 42 493 343 52 45 chr17 25413 25460 -85413020 - L3 LINE CR1 -860 717 672 2196 111 0 0 chr17 25460 25767 -85412713 - AluSx SINE Alu -5 307 1 493 343 52 45 chr17 25767 26005 -85412475 - L3 LINE CR1 -905 672 430 1485 165 104 4 chr17 26715 26994 -85411486 - AluJo SINE Alu -5 307 1 212 261 0 0 chr17 26998 27044 -85411436 + T-rich Low_complexity Low_complexity 5 50 0 1911 128 0 42 chr17 27456 27768 -85410712 + AluSx SINE Alu 1 299 -13 182 36 0 36 chr17 27960 27988 -85410492 + (CGGGGG)n Simple_repeat Simple_repeat 2 28 0 2123 54 0 0 chr17 29443 29701 -85408779 + AluSx SINE Alu 39 296 -16 1389 137 82 4 chr17 29957 30190 -85408290 + AluJo SINE Alu 14 264 -48 2116 111 0 10 chr17 30368 30666 -85407814 + AluSx SINE Alu 1 295 -17 2000 151 0 0 chr17 32040 32351 -85406129 - AluSx SINE Alu -1 311 1 447 71 0 0 chr17 32351 32407 -85406073 - AluSq/x SINE Alu -177 135 80 1420 142 0 0 chr17 32409 32621 -85405859 - AluSq SINE Alu -101 212 1 268 348 68 59 chr17 32747 32983 -85405497 - L2 LINE L2 -8 3264 3027 1954 112 18 3 chr17 33099 33385 -85405095 - AluSg SINE Alu -20 290 1 1712 165 34 3 chr17 33443 33734 -85404746 - AluJb SINE Alu -10 302 3 559 149 0 26 chr17 34809 34977 -85403503 + AluSq SINE Alu 1 206 -107 2099 110 3 0 chr17 35184 35476 -85403004 - AluSx SINE Alu -19 293 1 2030 119 10 0 chr17 35479 35772 -85402708 - AluSq SINE Alu -17 296 1 267 31 0 0 chr17 36314 36346 -85402134 + (TG)n Simple_repeat Simple_repeat 2 33 0 1500 182 7 20 chr17 36346 36503 -85401977 - AluJo SINE Alu -20 292 139 1975 89 32 0 chr17 36503 36784 -85401696 - AluSg SINE Alu -8 302 13 1500 182 7 20 chr17 36784 36922 -85401558 - AluJo SINE Alu -173 139 1 1408 93 15 0 chr17 37641 37845 -85400635 - AluSg/x SINE Alu -16 294 88 2358 77 0 3 chr17 37948 38248 -85400232 - AluSp SINE Alu -14 299 1 545 242 47 32 chr17 38250 38440 -85400040 - Charlie2 DNA MER1_type -556 2306 2114 455 137 41 0 chr17 38454 38527 -85399953 + FLAM_A SINE Alu 56 131 -11 952 275 30 0 chr17 38528 38790 -85399690 - Charlie2 DNA MER1_type -737 2125 1856 2308 80 3 0 chr17 38804 39106 -85399374 - AluSx SINE Alu -9 303 1 536 268 22 0 chr17 39228 39366 -85399114 - Charlie2 DNA MER1_type -2713 149 9 2293 95 7 0 chr17 39953 40257 -85398223 - AluSq SINE Alu -7 306 1 1033 89 0 0 chr17 40257 40392 -85398088 - AluSq/x SINE Alu -178 135 1 572 233 25 17 chr17 40396 40516 -85397964 - FLAM_A SINE Alu -15 127 7 2380 42 0 0 chr17 40523 40831 -85397649 - AluY SINE Alu 0 308 1 316 200 0 0 chr17 40842 40902 -85397578 - L1MA6 LINE L1 -5 6295 6236 240 307 162 0 chr17 41091 41234 -85397246 + MIR3 SINE MIR 10 179 -75 383 308 94 23 chr17 41247 41479 -85397001 - MIR SINE MIR -6 256 14 2326 70 3 0 chr17 42571 42872 -85395608 - AluSx SINE Alu -10 302 1 2036 60 53 21 chr17 44013 44296 -85394184 + AluSc SINE Alu 1 292 -17 766 79 4 2 chr17 44366 44607 -85393873 + AluSx SINE Alu 1 290 -19 291 106 0 0 chr17 44727 44774 -85393706 + Alu SINE Alu 254 300 -2 1786 167 7 7 chr17 44835 45140 -85393340 + AluJb SINE Alu 1 305 -7 2270 74 0 0 chr17 45631 45915 -85392565 + AluSq SINE Alu 1 284 -29 201 300 0 67 chr17 45992 46082 -85392398 + L3 LINE CR1 1409 1492 -85 782 240 39 0 chr17 46548 46581 -85391899 + L1MB3 LINE L1 5970 6000 -183 207 0 0 0 chr17 46581 46604 -85391876 + (CGGAA)n Simple_repeat Simple_repeat 2 24 0 782 240 39 0 chr17 46604 46774 -85391706 + L1MB3 LINE L1 6000 6181 -2 2168 93 3 3 chr17 46783 47083 -85391397 + AluSq SINE Alu 1 300 -13 753 167 173 0 chr17 47099 47249 -85391231 + AluJo SINE Alu 122 297 -15 411 270 218 40 chr17 47250 47502 -85390978 - L1ME4a LINE L1 -34 6087 5791 23 0 0 0 chr17 47764 47787 -85390693 + AT_rich Low_complexity Low_complexity 1 23 0 1993 124 10 17 chr17 47787 48086 -85390394 - AluSx SINE Alu -15 297 1 263 373 40 0 chr17 48215 48365 -85390115 - L2 LINE L2 -868 2446 2291 474 291 40 7 chr17 49074 49222 -85389258 - MIR SINE MIR -29 233 81 2149 110 3 0 chr17 49223 49523 -85388957 + AluSx SINE Alu 1 301 -11 895 175 0 0 chr17 50045 50199 -85388281 + AluJo SINE Alu 1 154 -158 2144 102 10 0 chr17 50865 51159 -85387321 - AluSc SINE Alu -12 297 1 1177 99 0 12 chr17 51165 51327 -85387153 - FRAM SINE Alu -17 159 1 1960 104 24 0 chr17 51443 51731 -85386749 - AluSx SINE Alu -17 295 1 1793 92 53 32 chr17 52804 53085 -85385395 + AluSg SINE Alu 9 295 -15 608 300 130 0 chr17 53573 53803 -85384677 - MIR SINE MIR -1 261 2 252 0 0 0 chr17 53902 53930 -85384550 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 1789 152 11 0 chr17 53932 54208 -85384272 - AluJb SINE Alu -33 279 1 2345 80 3 0 chr17 55848 56149 -85382331 - AluSp SINE Alu -10 303 2 2188 101 30 0 chr17 57565 57863 -85380617 + AluSx SINE Alu 1 307 -5 2174 119 3 0 chr17 58306 58609 -85379871 + AluSx SINE Alu 1 304 -8 1038 106 0 0 chr17 58839 58980 -85379500 + AluJb SINE Alu 1 141 -171 26 30 0 0 chr17 58997 59030 -85379450 + AT_rich Low_complexity Low_complexity 1 33 0 324 0 0 0 chr17 59664 59700 -85378780 + (CA)n Simple_repeat Simple_repeat 2 37 0 1743 190 3 0 chr17 59780 60085 -85378395 + AluSx SINE Alu 1 306 -6 2535 33 0 0 chr17 60255 60554 -85377926 + AluY SINE Alu 1 299 -12 461 423 127 14 chr17 61732 62238 -85376242 + L3 LINE CR1 185 747 -830 404 42 0 0 chr17 62238 62286 -85376194 + AluY SINE Alu 155 202 -109 1828 101 8 8 chr17 62298 62555 -85375925 + AluSq SINE Alu 5 261 -52 932 64 29 81 chr17 62655 62751 -85375729 - MER30 DNA MER1_type -60 170 85 2226 101 3 0 chr17 62751 63047 -85375433 - AluSp SINE Alu -16 297 1 932 64 29 81 chr17 63047 63123 -85375357 - MER30 DNA MER1_type -145 85 7 410 263 47 52 chr17 63124 63337 -85375143 + L3 LINE CR1 1018 1229 -348 232 274 88 26 chr17 63530 63643 -85374837 + MLT1K LTR MaLR 97 216 -372 441 257 117 9 chr17 64000 64114 -85374366 + L1MC5 LINE L1 7458 7558 -403 2201 73 0 4 chr17 64114 64389 -85374091 + AluY SINE Alu 23 296 -15 441 257 117 9 chr17 64389 64488 -85373992 + L1MC5 LINE L1 7558 7694 -267 271 272 39 10 chr17 64580 64683 -85373797 + L1MC5 LINE L1 7822 7927 -34 863 192 23 6 chr17 64812 64989 -85373491 + AluJb SINE Alu 121 300 -12 2099 135 3 0 chr17 65058 65369 -85373111 + AluSx SINE Alu 1 312 0 682 268 41 41 chr17 65553 65796 -85372684 - MIR SINE MIR -10 252 10 2177 106 3 0 chr17 67346 67648 -85370832 - AluSp SINE Alu -10 303 1 2317 74 0 0 chr17 67831 68128 -85370352 + AluY SINE Alu 1 297 -14 497 113 38 0 chr17 68289 68369 -85370111 + AluS SINE Alu 1 83 -230 202 244 0 0 chr17 69421 69466 -85369014 + T-rich Low_complexity Low_complexity 1 45 0 565 103 0 0 chr17 70092 70170 -85368310 + AluSq/x SINE Alu 58 135 -178 2096 76 0 28 chr17 70170 70459 -85368021 + AluSx SINE Alu 1 281 -31 397 278 43 43 chr17 72266 72428 -85366052 + MIR3 SINE MIR 5 166 -42 420 287 237 20 chr17 72676 73168 -85365312 - L2 LINE L2 -16 3297 2688 1326 102 0 0 chr17 73243 73430 -85365050 - AluSg/x SINE Alu 0 312 126 2413 49 7 10 chr17 73430 73738 -85364742 - AluY SINE Alu -4 307 1 1795 154 16 3 chr17 73765 74070 -85364410 - AluJb SINE Alu -3 309 1 202 289 141 58 chr17 74078 74199 -85364281 - MIR SINE MIR -122 140 10 2407 83 0 0 chr17 74525 74837 -85363643 - AluSx SINE Alu 0 312 1 832 92 0 0 chr17 76480 76599 -85361881 - AluSx SINE Alu 0 312 194 1042 93 7 0 chr17 76600 76740 -85361740 - AluSx SINE Alu -171 141 1 1644 119 67 28 chr17 76810 77095 -85361385 - AluSg SINE Alu -14 296 1 2163 85 0 0 chr17 77209 77481 -85360999 - AluSc SINE Alu -37 272 1 245 196 0 36 chr17 77597 77653 -85360827 + MLT2D LTR ERVL 1 54 -360 6079 196 18 12 chr17 77656 78957 -85359523 + ERVL LTR ERVL 3031 4338 -1426 5980 167 25 3 chr17 79341 80456 -85358024 + ERVL LTR ERVL 4298 5437 -327 248 217 17 0 chr17 80457 80517 -85357963 - Tigger1 DNA MER2_type -2 2416 2356 2064 131 3 7 chr17 80517 80823 -85357657 + AluSx SINE Alu 1 305 -7 2134 109 3 0 chr17 80824 81126 -85357354 + AluY SINE Alu 1 303 -8 1749 137 53 14 chr17 81126 81661 -85356819 - Tigger1 DNA MER2_type -210 2208 1582 2019 147 0 0 chr17 81662 81961 -85356519 - AluJb SINE Alu -13 299 1 369 0 0 0 chr17 82901 82942 -85355538 + (TG)n Simple_repeat Simple_repeat 2 42 0 2415 64 0 0 chr17 82952 83248 -85355232 - AluY SINE Alu -15 296 1 2064 112 10 10 chr17 83296 83608 -85354872 + AluSx SINE Alu 1 312 0 997 104 8 0 chr17 83643 83777 -85354703 + AluSg/x SINE Alu 144 278 -32 8160 51 24 4 chr17 83777 84764 -85353716 - LTR13 LTR ERVK 0 1007 1 315 0 0 0 chr17 84772 84807 -85353673 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 2048 98 0 33 chr17 85554 85860 -85352620 - AluSg SINE Alu -14 296 1 202 280 0 0 chr17 86297 86347 -85352133 + GA-rich Low_complexity Low_complexity 3 52 0 408 208 26 32 chr17 86607 86761 -85351719 + (CGGGG)n Simple_repeat Simple_repeat 3 155 0 195 152 0 0 chr17 87068 87114 -85351366 + G-rich Low_complexity Low_complexity 6 51 0 377 253 86 21 chr17 87323 87496 -85350984 + Charlie2 DNA MER1_type 2423 2610 -252 2311 70 0 26 chr17 87496 87809 -85350671 - AluY SINE Alu -6 305 1 377 253 86 21 chr17 87809 87821 -85350659 + Charlie2 DNA MER1_type 2610 2620 -242 2540 40 0 0 chr17 87909 88206 -85350274 - AluY SINE Alu -14 297 1 848 239 24 0 chr17 88206 88419 -85350061 + Charlie2 DNA MER1_type 2604 2821 -41 244 290 160 10 chr17 88594 88694 -85349786 - MIR SINE MIR -54 208 94 300 281 49 0 chr17 88798 88880 -85349600 + MIR SINE MIR 98 183 -79 230 322 59 67 chr17 89837 90076 -85348404 + MER102a DNA MER1_type 85 321 -9 261 329 58 44 chr17 90646 90783 -85347697 - MIR SINE MIR -54 154 16 813 254 40 20 chr17 94487 94688 -85343792 + MIR SINE MIR 21 225 -37 23 0 0 0 chr17 99896 99919 -85338561 + AT_rich Low_complexity Low_complexity 1 23 0 1905 107 48 38 chr17 101850 102139 -85336341 + AluSg SINE Alu 1 292 -18 708 191 34 14 chr17 102139 102286 -85336194 + MER20 DNA MER1_type 69 218 -1 351 65 0 0 chr17 102684 102730 -85335750 + (TA)n Simple_repeat Simple_repeat 1 46 0 503 228 65 8 chr17 103658 103781 -85334699 - MIR SINE MIR -70 192 63 1800 61 5 0 chr17 104225 104439 -85334041 - AluY SINE Alu -13 298 84 1284 98 5 79 chr17 105503 105706 -85332774 + AluSg SINE Alu 1 188 -122 1609 84 10 0 chr17 105706 105908 -85332572 + AluSq SINE Alu 104 307 -6 1379 223 41 0 chr17 105909 106228 -85332252 + MER63 DNA MER1_type 680 1011 -49 2330 91 0 0 chr17 106253 106539 -85331941 - AluSx SINE Alu -26 286 1 1122 164 0 0 chr17 106913 107078 -85331402 + AluJb SINE Alu 137 301 -11 2098 101 39 3 chr17 107229 107515 -85330965 + AluSc SINE Alu 1 296 -13 213 272 47 6 chr17 107907 108076 -85330404 + (AGGTG)n Simple_repeat Simple_repeat 3 178 0 266 265 29 12 chr17 108114 108284 -85330196 + (AGGTG)n Simple_repeat Simple_repeat 1 173 0 2521 71 0 7 chr17 109383 109692 -85328788 - AluSq SINE Alu -6 307 1 238 116 47 0 chr17 109762 109805 -85328675 - L1MB3 LINE L1 -7 6176 6132 2313 102 0 10 chr17 109805 110108 -85328372 - AluSx SINE Alu -12 300 1 851 173 13 13 chr17 113254 113410 -85325070 + BC200 scRNA scRNA 1 156 -44 1602 132 100 48 chr17 113414 113703 -85324777 + AluJo SINE Alu 1 304 -8 2324 106 0 3 chr17 114002 114303 -85324177 + AluSq SINE Alu 1 300 -13 283 270 180 0 chr17 114650 114761 -85323719 - MIR SINE MIR -120 142 12 2318 93 3 6 chr17 115224 115535 -85322945 - AluSq SINE Alu -3 310 1 198 246 0 62 chr17 115566 115631 -85322849 + MIR3 SINE MIR 108 168 -40 240 318 93 6 chr17 115713 115872 -85322608 + MIR SINE MIR 20 191 -60 2290 125 0 0 chr17 116003 116314 -85322166 - AluSx SINE Alu -1 311 1 2140 97 41 3 chr17 117092 117382 -85321098 - AluSp SINE Alu -12 301 1 1252 114 0 16 chr17 117510 117694 -85320786 - AluSg/x SINE Alu -4 306 126 2106 130 0 3 chr17 117702 117995 -85320485 - AluJb SINE Alu -20 292 1 514 217 85 0 chr17 117996 118125 -85320355 - MIR SINE MIR -43 219 80 2310 114 0 0 chr17 118849 119156 -85319324 - AluSx SINE Alu -5 307 1 1230 209 25 48 chr17 119442 119757 -85318723 + AluJo SINE Alu 1 308 -4 932 244 59 59 chr17 119927 120011 -85318469 - MER33 DNA MER1_type -2261 324 241 2129 154 0 0 chr17 120011 120316 -85318164 + AluJo SINE Alu 6 310 -2 932 244 59 59 chr17 120316 120555 -85317925 - MER33 DNA MER1_type -2343 242 1 2133 102 9 25 chr17 120867 121182 -85317298 - AluSx SINE Alu -2 310 1 2225 111 0 3 chr17 121654 121952 -85316528 - AluSx SINE Alu -15 297 1 2241 122 3 0 chr17 122567 122871 -85315609 + AluSg SINE Alu 1 305 -5 2343 78 23 19 chr17 123132 123440 -85315040 + AluSg SINE Alu 1 309 -1 207 0 0 0 chr17 123845 123868 -85314612 + (T)n Simple_repeat Simple_repeat 1 23 0 2455 86 7 0 chr17 124205 124508 -85313972 - AluSx SINE Alu -7 305 1 365 97 32 0 chr17 124999 125061 -85313419 + GA-rich Low_complexity Low_complexity 3 66 0 290 212 21 88 chr17 125068 125261 -85313219 + (CAGAGA)n Simple_repeat Simple_repeat 1 180 0 411 257 9 0 chr17 125313 125418 -85313062 + MLT2B1 LTR ERVL 1 106 -414 2032 144 7 3 chr17 125419 125725 -85312755 - AluSq SINE Alu -6 307 1 1691 184 3 7 chr17 125877 126171 -85312309 + AluJo SINE Alu 1 293 -19 280 274 20 89 chr17 126402 126548 -85311932 - MIR3 SINE MIR -58 150 15 1778 128 74 30 chr17 127180 127478 -85311002 + AluJb SINE Alu 1 311 -1 2338 101 3 3 chr17 127594 127901 -85310579 - AluSx SINE Alu -5 307 1 2631 32 9 25 chr17 128409 128725 -85309755 + AluY SINE Alu 1 311 0 2275 83 9 49 chr17 128890 129216 -85309264 - AluSq SINE Alu 0 313 1 1514 153 6 86 chr17 129967 130148 -85308332 - AluJo SINE Alu -10 302 108 450 0 0 0 chr17 130148 130198 -85308282 + (TTTA)n Simple_repeat Simple_repeat 2 51 0 2349 70 0 11 chr17 130198 130485 -85307995 - AluY SINE Alu -27 284 1 1514 153 6 86 chr17 130485 130628 -85307852 - AluJo SINE Alu -202 110 3 310 167 0 77 chr17 131299 131377 -85307103 - AluYa5 SINE Alu -119 182 111 2056 108 32 0 chr17 131377 131655 -85306825 + AluSx SINE Alu 10 296 -16 2438 57 0 0 chr17 131657 131975 -85306505 + AluY SINE Alu 1 318 0 1935 244 98 51 chr17 132322 132900 -85305580 - L1ME2 LINE L1 -10 6154 5528 1550 165 85 0 chr17 132900 133172 -85305308 + AluJb SINE Alu 1 295 -17 1935 244 98 51 chr17 133172 133375 -85305105 - L1ME2 LINE L1 -636 5528 5336 2108 93 11 0 chr17 134839 135108 -85303372 + AluSx SINE Alu 1 272 -40 2076 51 4 19 chr17 135208 135491 -85302989 + AluY SINE Alu 32 310 0 1764 176 0 38 chr17 135565 135878 -85302602 - AluJb SINE Alu -11 301 1 792 233 30 15 chr17 136175 136377 -85302103 - MER20 DNA MER1_type -14 205 1 2370 56 0 3 chr17 137546 137876 -85300604 + AluY SINE Alu 1 329 0 1768 104 120 0 chr17 138428 138687 -85299793 - AluSx SINE Alu -16 296 7 1766 135 53 0 chr17 139712 139993 -85298487 - AluSx SINE Alu -16 296 1 268 338 14 45 chr17 140108 140293 -85298187 - L1MC/D LINE L1 -299 5822 5688 2373 88 7 0 chr17 140293 140590 -85297890 - AluSx SINE Alu -12 300 2 268 338 14 45 chr17 140590 140661 -85297819 - L1MC/D LINE L1 -433 5688 5616 1370 203 29 22 chr17 142300 142616 -85295864 - L1MC2 LINE L1 -9 6335 6018 275 229 134 89 chr17 142616 142773 -85295707 + MER20 DNA MER1_type 53 216 -3 281 264 0 42 chr17 143205 143349 -85295131 + (GGTTG)n Simple_repeat Simple_repeat 2 139 0 232 300 0 39 chr17 143389 143569 -85294911 + (GGTTG)n Simple_repeat Simple_repeat 2 174 0 195 222 22 0 chr17 143768 143813 -85294667 + MIR SINE MIR 105 150 -112 1707 149 46 4 chr17 143993 144255 -85294225 + AluJb SINE Alu 1 273 -39 372 234 0 0 chr17 144257 144351 -85294129 + (CAGA)n Simple_repeat Simple_repeat 3 96 0 2343 78 0 26 chr17 144680 144987 -85293493 + AluY SINE Alu 1 299 -12 761 35 43 9 chr17 145573 145689 -85292791 + (TTTC)n Simple_repeat Simple_repeat 1 120 0 1843 98 78 0 chr17 145691 145946 -85292534 - AluSx SINE Alu -37 275 1 219 296 70 0 chr17 146207 146278 -85292202 - MIR SINE MIR -173 89 14 554 91 0 71 chr17 146376 146475 -85292005 - AluSp/q SINE Alu -10 303 212 290 154 19 0 chr17 146783 146835 -85291645 - MSTA LTR MaLR 0 428 376 * 395 216 0 0 chr17 146833 146907 -85291573 - AluJ/FRAM SINE Alu -3 299 226 2301 117 8 34 chr17 146924 146974 -85291506 - THE1C LTR MaLR 0 375 325 2225 99 14 0 chr17 146974 147267 -85291213 - AluSg SINE Alu -13 297 1 2301 117 8 34 chr17 147267 147601 -85290879 - THE1C LTR MaLR -50 325 1 2220 102 17 0 chr17 148064 148359 -85290121 - AluSx SINE Alu -12 300 1 691 205 40 145 chr17 148359 148656 -85289824 - MLT2D LTR ERVL -49 365 100 502 105 26 0 chr17 148656 148732 -85289748 + AluS SINE Alu 1 78 -234 2300 96 3 0 chr17 148889 149181 -85289299 + AluSx SINE Alu 1 293 -19 332 156 26 39 chr17 150161 150238 -85288242 - L1MC4 LINE L1 0 8042 7967 219 204 61 0 chr17 150591 150640 -85287840 - MER5A DNA MER1_type -133 56 5 1196 208 4 49 chr17 150698 150790 -85287690 - MER8 DNA MER2_type 0 239 144 1881 143 0 7 chr17 150790 151083 -85287397 + AluJo SINE Alu 1 291 -21 2321 100 10 0 chr17 151086 151385 -85287095 + AluY SINE Alu 1 302 -9 1196 208 4 49 chr17 151385 151533 -85286947 - MER8 DNA MER2_type -97 142 6 1912 284 76 41 chr17 151533 152014 -85286466 - L1MC4 LINE L1 -156 7886 7424 1764 171 0 26 chr17 152014 152319 -85286161 - AluJo SINE Alu -15 297 1 1912 284 76 41 chr17 152319 152422 -85286058 - L1MC4 LINE L1 -618 7424 7326 2075 138 7 13 chr17 152422 152729 -85285751 + AluSx SINE Alu 1 303 -9 1912 284 76 41 chr17 152729 153118 -85285362 - L1MC4 LINE L1 -716 7326 6952 2015 132 0 0 chr17 153118 153414 -85285066 + AluSx SINE Alu 1 296 -16 1912 284 76 41 chr17 153414 153858 -85284622 - L1MC4 LINE L1 -1090 6952 6116 1306 156 0 0 chr17 153858 154070 -85284410 + AluSx SINE Alu 1 212 -100 430 121 0 0 chr17 154070 154128 -85284352 + AluSg/x SINE Alu 76 133 -176 1920 131 0 0 chr17 154128 154434 -85284046 + AluSx SINE Alu 1 306 0 2317 80 0 6 chr17 155793 156106 -85282374 - AluY SINE Alu 0 311 1 231 277 67 0 chr17 156114 156233 -85282247 + MER113 DNA MER1_type? 4 130 -391 869 165 0 0 chr17 156233 156366 -85282114 + FLAM_C SINE Alu 1 133 0 1390 115 5 10 chr17 156374 156582 -85281898 + AluJb SINE Alu 94 300 -12 680 278 0 6 chr17 156588 156764 -85281716 + MER113 DNA MER1_type? 296 470 -51 2222 107 3 0 chr17 156992 157301 -85281179 + AluSx SINE Alu 1 310 -2 800 250 38 0 chr17 157319 157503 -85280977 + MLT1A1 LTR MaLR 175 365 0 1368 173 4 15 chr17 157508 157768 -85280712 + MLT1A1-int LTR MaLR 2 258 -1477 2060 90 37 10 chr17 157768 158068 -85280412 + AluSx SINE Alu 1 308 -4 2204 83 10 0 chr17 158345 158635 -85279845 - AluSc SINE Alu -16 293 1 1647 161 3 10 chr17 159263 159554 -85278926 - AluJo SINE Alu -23 289 1 2241 98 0 0 chr17 159575 159871 -85278609 - AluSx SINE Alu -16 296 1 2360 59 0 23 chr17 159875 160181 -85278299 - AluY SINE Alu -12 299 1 327 275 56 112 chr17 160367 160528 -85277952 - L2 LINE L2 0 3313 3179 2140 88 7 3 chr17 160528 160824 -85277656 + AluSg SINE Alu 1 297 -13 327 275 56 112 chr17 160824 161000 -85277480 - L2 LINE L2 -134 3179 2995 1960 110 27 14 chr17 161086 161378 -85277102 - AluSx SINE Alu -16 296 1 1209 120 0 0 chr17 161403 161570 -85276910 + AluY SINE Alu 133 299 -12 264 237 34 0 chr17 161579 161638 -85276842 - MER5A DNA MER1_type -64 125 65 1232 186 8 27 chr17 162447 162710 -85275770 - AluJo SINE Alu -43 269 12 1981 136 3 3 chr17 162726 163100 -85275380 + AluSg SINE Alu 1 374 0 1806 96 3 108 chr17 163586 163921 -85274559 + AluSp SINE Alu 1 300 -13 2133 68 10 3 chr17 163977 164269 -85274211 - AluY SINE Alu -17 294 1 317 429 7 0 chr17 164293 164447 -85274033 - L2 LINE L2 -7 3265 3111 187 274 0 48 chr17 164486 164548 -85273932 + MIR SINE MIR 204 262 0 289 326 18 54 chr17 164962 165186 -85273294 - L2 LINE L2 -222 3050 2835 287 226 0 57 chr17 165194 165318 -85273162 + G-rich Low_complexity Low_complexity 3 119 0 294 270 180 0 chr17 166422 166533 -85271947 + MIR SINE MIR 12 142 -120 2221 93 3 6 chr17 166574 166887 -85271593 - AluSp SINE Alu -1 312 1 1026 126 0 0 chr17 166977 167128 -85271352 - FRAM SINE Alu -26 150 1 254 284 59 10 chr17 167360 167462 -85271018 + L2 LINE L2 3111 3217 -96 2434 65 0 3 chr17 167612 167918 -85270562 + AluSx SINE Alu 1 305 -7 1630 164 51 0 chr17 167997 168290 -85270190 - AluJb SINE Alu -4 308 1 224 309 62 10 chr17 168290 168387 -85270093 - L2 LINE L2 -219 3053 2952 216 320 40 10 chr17 168423 168523 -85269957 - L2 LINE L2 -219 3053 2951 409 238 79 0 chr17 168631 168732 -85269748 + MER20 DNA MER1_type 111 219 0 2094 109 0 16 chr17 168890 169202 -85269278 + AluSx SINE Alu 1 307 -5 873 166 43 21 chr17 170332 170519 -85267961 - AluJo SINE Alu -3 309 119 2468 60 0 0 chr17 170931 171233 -85267247 - AluY SINE Alu -9 302 1 1070 179 82 0 chr17 171322 171517 -85266963 + AluSg SINE Alu 1 211 -99 422 73 0 0 chr17 171517 171572 -85266908 + AluSq/x SINE Alu 78 132 -181 1573 118 114 0 chr17 171575 171820 -85266660 + AluSg SINE Alu 1 273 -37 342 170 0 0 chr17 171935 171988 -85266492 - Alu SINE Alu -16 286 234 351 270 42 112 chr17 172097 172338 -85266142 + L1ME1 LINE L1 5896 6119 -47 347 251 61 28 chr17 172338 172464 -85266016 + L1ME1 LINE L1 6046 6331 -3 2395 66 3 3 chr17 172482 172785 -85265695 + AluY SINE Alu 1 303 -8 1994 152 0 0 chr17 172793 173103 -85265377 + AluSx SINE Alu 1 310 -2 1305 96 5 24 chr17 173215 173423 -85265057 - AluSx SINE Alu -108 204 1 1906 128 7 0 chr17 175104 175400 -85263080 - AluSx SINE Alu -14 298 1 1547 84 13 4 chr17 175693 175920 -85262560 + AluY SINE Alu 1 229 -82 629 99 0 0 chr17 176021 176112 -85262368 - AluJ/FLAM SINE Alu -220 92 2 2328 64 7 3 chr17 176960 177257 -85261223 + AluY SINE Alu 1 298 -13 2302 56 3 30 chr17 177665 177970 -85260510 + AluY SINE Alu 1 297 -14 1642 115 13 102 chr17 178350 178703 -85259777 + AluSx SINE Alu 1 325 0 626 148 109 47 chr17 178703 178831 -85259649 + MER2 DNA MER2_type 3 138 -207 744 168 0 8 chr17 178840 178971 -85259509 - FLAM_C SINE Alu -3 130 1 182 269 191 28 chr17 178979 179120 -85259360 + L2 LINE L2 1506 1669 -1645 2215 94 3 0 chr17 179132 179430 -85259050 - AluSq SINE Alu -14 299 1 615 338 52 7 chr17 179647 179952 -85258528 + L2 LINE L2 2987 3305 -8 5233 66 8 0 chr17 180037 180690 -85257790 + L1PA8 LINE L1 5514 6171 -1 2065 90 7 0 chr17 180696 180973 -85257507 + AluSx SINE Alu 3 281 -31 251 311 82 7 chr17 180987 181122 -85257358 + L1ME LINE L1 5396 5540 -581 508 276 112 19 chr17 182127 182341 -85256139 + MIR SINE MIR 23 256 -6 652 139 124 22 chr17 182364 182501 -85255979 - AluJb SINE Alu -31 281 131 252 0 0 0 chr17 182503 182531 -85255949 + (TTA)n Simple_repeat Simple_repeat 2 29 0 1549 181 4 0 chr17 182540 182817 -85255663 - AluJo SINE Alu -34 278 1 2229 90 3 3 chr17 183660 183972 -85254508 - AluSx SINE Alu 0 312 1 271 170 0 0 chr17 184134 184187 -85254293 + L1MB4 LINE L1 6128 6180 0 721 288 56 0 chr17 184473 184688 -85253792 + MIR SINE MIR 13 239 -23 2308 84 0 10 chr17 184691 185001 -85253479 + AluSq SINE Alu 1 307 -6 1716 129 50 4 chr17 185073 185353 -85253127 + AluJb SINE Alu 7 299 -13 2196 110 7 0 chr17 185353 185662 -85252818 + AluSx SINE Alu 1 311 -1 2009 96 50 0 chr17 187727 188007 -85250473 - AluSx SINE Alu -18 294 1 247 299 93 10 chr17 188214 188311 -85250169 + L2 LINE L2 3163 3267 -5 2145 104 0 10 chr17 188817 189124 -85249356 + AluSx SINE Alu 1 304 -8 3224 113 10 12 chr17 190310 190807 -85247673 + LTR10D LTR ERV1 1 496 -17 1985 108 40 0 chr17 190812 191108 -85247372 - AluSg1 SINE Alu 0 309 2 1867 103 10 61 chr17 191158 191469 -85247011 - AluSg SINE Alu -14 296 2 2324 100 0 0 chr17 192372 192682 -85245798 + AluSg SINE Alu 1 310 0 2148 92 0 3 chr17 194174 194598 -85243882 - AluSq SINE Alu 0 423 1 2063 106 3 0 chr17 195101 195393 -85243087 - AluSx SINE Alu -13 299 7 548 288 123 14 chr17 196061 196273 -85242207 - MIR SINE MIR -19 243 9 2300 64 7 0 chr17 196612 196908 -85241572 + AluY SINE Alu 1 298 -13 2135 111 7 0 chr17 197387 197685 -85240795 + AluSx SINE Alu 1 300 -12 2311 98 0 0 chr17 197685 197991 -85240489 + AluSx SINE Alu 1 306 -6 2437 59 0 3 chr17 198441 198747 -85239733 - AluY SINE Alu -6 305 1 702 49 0 0 chr17 198747 198829 -85239651 - AluY SINE Alu -167 144 63 1195 120 71 0 chr17 198829 199013 -85239467 - AluSx SINE Alu -115 197 1 1555 155 50 7 chr17 200843 201140 -85237340 - AluJo SINE Alu -2 310 1 206 246 0 155 chr17 201152 201294 -85237186 - MER5A DNA MER1_type -63 126 7 437 197 49 38 chr17 201401 201540 -85236940 + MER5B DNA MER1_type 56 178 0 2326 68 0 26 chr17 201741 202051 -85236429 + AluY SINE Alu 1 302 -9 2296 97 0 0 chr17 202673 202971 -85235509 - AluSx SINE Alu -14 298 1 2057 138 0 0 chr17 202974 203270 -85235210 - AluSx SINE Alu -16 296 1 554 204 0 10 chr17 203377 203480 -85235000 - FLAM_A SINE Alu -8 134 33 2295 98 7 0 chr17 203784 204089 -85234391 - AluSq SINE Alu -6 307 1 2234 87 20 0 chr17 204313 204612 -85233868 - AluY SINE Alu -6 305 1 322 251 61 28 chr17 204630 204756 -85233724 - L1ME1 LINE L1 -3 6331 6046 283 261 46 116 chr17 204756 204997 -85233483 - L1ME1 LINE L1 -47 6119 5896 2074 115 3 0 chr17 205696 205983 -85232497 + AluSx SINE Alu 1 288 -24 1306 82 0 0 chr17 207210 207381 -85231099 + AluSg/x SINE Alu 138 308 -4 189 0 0 0 chr17 208695 208716 -85229764 + (CACCC)n Simple_repeat Simple_repeat 3 23 0 1134 164 0 0 chr17 209342 209525 -85228955 + AluJo SINE Alu 112 294 -18 2312 76 10 3 chr17 209915 210217 -85228263 + AluSx SINE Alu 9 312 0 1806 243 98 51 chr17 210566 211144 -85227336 - L1ME2 LINE L1 -10 6154 5528 1426 167 93 0 chr17 211144 211414 -85227066 + AluJb SINE Alu 1 295 -17 1806 243 98 51 chr17 211414 211617 -85226863 - L1ME2 LINE L1 -636 5528 5336 2282 95 10 0 chr17 213081 213386 -85225094 + AluSx SINE Alu 1 308 -4 2291 84 3 0 chr17 213488 213784 -85224696 - AluSq SINE Alu -16 297 1 2092 98 0 0 chr17 214608 214882 -85223598 - AluSq SINE Alu -39 274 1 236 320 20 68 chr17 215271 215521 -85222959 + L2 LINE L2 2817 3054 -218 188 274 0 48 chr17 215930 215992 -85222488 - MIR SINE MIR 0 262 204 334 429 7 0 chr17 216031 216185 -85222295 + L2 LINE L2 3111 3265 -7 1488 64 5 0 chr17 216209 216397 -85222083 + AluY SINE Alu 1 189 -122 204 320 190 34 chr17 218263 218532 -85219948 + L2 LINE L2 2932 3242 -30 347 288 129 71 chr17 219610 220189 -85218291 + L1M2 LINE L1 757 1369 -5480 303 313 98 0 chr17 221398 221510 -85216970 + MIR SINE MIR 52 174 -88 2024 131 0 3 chr17 222065 222362 -85216118 + AluSx SINE Alu 1 296 -16 201 224 0 0 chr17 223530 223579 -85214901 - MIR SINE MIR -79 129 81 695 186 0 9 chr17 226131 226244 -85212236 - AluJb SINE Alu -195 117 6 2224 88 14 3 chr17 226580 226876 -85211604 + AluSx SINE Alu 1 299 -13 2160 97 0 26 chr17 226895 227203 -85211277 + AluSx SINE Alu 1 300 -12 340 161 0 0 chr17 228648 228704 -85209776 - AluS SINE Alu -244 57 2 2135 147 144 0 chr17 228865 229239 -85209241 + MSTA LTR MaLR 1 428 0 1799 177 0 6 chr17 229253 229564 -85208916 - AluSx SINE Alu -3 309 1 1633 125 29 96 chr17 229592 229905 -85208575 + AluJo SINE Alu 2 293 -19 209 281 226 7 chr17 231735 231881 -85206599 - L2 LINE L2 -4 3268 3091 2204 134 0 0 chr17 232060 232367 -85206113 + AluSx SINE Alu 1 307 -5 794 105 48 32 chr17 233003 233127 -85205353 + FLAM_C SINE Alu 1 126 -17 1602 166 32 3 chr17 233143 233426 -85205054 + AluJo SINE Alu 1 291 -21 2153 82 14 0 chr17 233626 233934 -85204546 + AluSg SINE Alu 1 312 0 189 359 13 13 chr17 234423 234501 -85203979 + MIR SINE MIR 67 144 -118 412 305 26 26 chr17 238135 238286 -85200194 - MIR3 SINE MIR -55 153 3 257 268 0 0 chr17 238695 238751 -85199729 + C-rich Low_complexity Low_complexity 4 59 0 1858 147 0 10 chr17 238887 239186 -85199294 + AluJb SINE Alu 4 299 -13 721 283 91 8 chr17 240273 240634 -85197846 - MER90 LTR ERV1 -63 551 161 214 371 0 0 chr17 240798 240860 -85197620 + L2 LINE L2 3242 3303 -10 2123 95 3 14 chr17 240860 241155 -85197325 + AluSx SINE Alu 1 292 -20 319 234 36 36 chr17 241401 241512 -85196968 - MER103 DNA DNA -46 120 10 503 243 40 7 chr17 242565 242717 -85195763 + L1ME4a LINE L1 5961 6117 -4 999 121 0 0 chr17 243917 244058 -85194422 - AluSq/x SINE Alu -172 141 1 2214 166 18 2 chr17 244058 244497 -85193983 - L1ME1 LINE L1 -211 5955 5510 467 270 20 77 chr17 244521 244717 -85193763 - MIR SINE MIR 0 262 78 364 301 163 44 chr17 244730 244997 -85193483 - L2 LINE L2 -1 3312 3078 2394 89 0 0 chr17 244997 245310 -85193170 - AluSp SINE Alu 0 313 1 364 301 163 44 chr17 245310 245582 -85192898 - L2 LINE L2 -235 3078 2708 2021 116 3 32 chr17 246160 246465 -85192015 + AluSx SINE Alu 1 297 -10 369 0 0 0 chr17 246465 246506 -85191974 + (CATA)n Simple_repeat Simple_repeat 2 42 0 1108 140 0 0 chr17 246511 246675 -85191805 + AluSg/x SINE Alu 132 295 -15 1408 120 9 40 chr17 248283 248508 -85189972 + AluSg/x SINE Alu 95 312 0 2093 122 3 0 chr17 249435 249731 -85188749 - AluSx SINE Alu -11 301 5 2074 97 0 27 chr17 249735 250033 -85188447 - AluSx SINE Alu -22 290 1 1815 189 20 40 chr17 250067 250421 -85188059 + MER7A DNA MER2_type 2 346 0 563 165 0 10 chr17 250644 250741 -85187739 + AluS SINE Alu 1 96 -216 1557 96 0 26 chr17 250864 251094 -85187386 - AluSg SINE Alu -86 224 1 567 15 0 0 chr17 251336 251424 -85187056 + AluY SINE Alu 217 304 0 2356 55 7 0 chr17 251438 251727 -85186753 + AluY SINE Alu 5 295 -16 847 11 30 57 chr17 251727 251979 -85186501 + (TA)n Simple_repeat Simple_repeat 1 245 0 382 220 0 51 chr17 252829 252947 -85185533 + MER20B DNA MER1_type 31 142 -641 1148 128 0 0 chr17 254227 254391 -85184089 - AluSg/x SINE Alu -15 297 134 405 0 0 0 chr17 254396 254441 -85184039 + (TATG)n Simple_repeat Simple_repeat 2 46 0 1941 114 7 23 chr17 254441 254742 -85183738 - AluSx SINE Alu -10 297 1 358 298 111 65 chr17 255491 255592 -85182888 + L2 LINE L2 2927 3022 -291 2388 89 0 0 chr17 255592 255905 -85182575 + AluSp SINE Alu 1 313 0 358 298 111 65 chr17 255905 256172 -85182308 + L2 LINE L2 3022 3312 -1 463 270 20 77 chr17 256185 256381 -85182099 + MIR SINE MIR 78 262 0 2660 165 63 23 chr17 256405 256844 -85181636 + L1ME1 LINE L1 5510 5977 -189 2340 91 0 0 chr17 256844 257151 -85181329 + AluSx SINE Alu 1 307 -5 2660 165 63 23 chr17 257151 257268 -85181212 + L1ME1 LINE L1 5977 6088 -78 6441 50 16 32 chr17 257620 258496 -85179984 - SVA Other Other 0 1386 525 461 289 23 2 chr17 259217 259387 -85179093 - MIR SINE MIR -41 221 44 523 206 41 0 chr17 260531 260628 -85177852 - Tigger3(Golem) DNA MER2_type 0 3029 2929 1701 118 103 79 chr17 260631 260960 -85177520 - MER1B DNA MER1_type 0 337 1 365 218 26 0 chr17 260977 261055 -85177425 - Tigger3(Golem) DNA MER2_type -2949 80 1 408 311 141 6 chr17 261120 261297 -85177183 - MIR SINE MIR -53 209 9 899 278 51 88 chr17 261304 261794 -85176686 + L2 LINE L2 2399 2870 -444 265 328 107 6 chr17 262113 262430 -85176050 + L2 LINE L2 2887 3307 -6 331 311 131 39 chr17 262438 262698 -85175782 + L2 LINE L2 2939 3222 -50 1189 171 0 0 chr17 262833 263020 -85175460 + AluJo SINE Alu 1 187 -125 2095 112 10 0 chr17 266139 266442 -85172038 - AluSx SINE Alu -6 306 1 269 324 118 0 chr17 266863 266965 -85171515 - MIR SINE MIR -72 190 77 484 291 86 83 chr17 267195 267556 -85170924 - L2 LINE L2 -1 3271 2910 821 159 0 0 chr17 268069 268195 -85170285 - FLAM_C SINE Alu -16 127 2 2030 188 124 8 chr17 268197 268739 -85169741 - L1MC4a LINE L1 -289 7519 6940 1533 172 39 26 chr17 268745 269053 -85169427 + AluJb SINE Alu 1 312 0 1051 129 13 258 chr17 271427 271970 -85166510 + L1MC4 LINE L1 7491 7900 -142 1129 165 37 0 chr17 271975 272163 -85166317 + AluJb SINE Alu 1 195 -117 291 93 0 0 chr17 272163 272206 -85166274 + (GGGGA)n Simple_repeat Simple_repeat 1 43 0 183 205 0 0 chr17 272206 272245 -85166235 + A-rich Low_complexity Low_complexity 5 43 0 423 245 26 40 chr17 272246 272397 -85166083 + L1MC4 LINE L1 7892 8040 -2 408 40 0 0 chr17 272407 272457 -85166023 + (TCTCCC)n Simple_repeat Simple_repeat 6 55 0 285 149 0 0 chr17 272579 272626 -85165854 - AluSp SINE Alu -128 175 129 * 354 137 0 0 chr17 272625 272676 -85165804 - AluSp SINE Alu -124 179 129 254 128 85 0 chr17 272675 272722 -85165758 - AluJ/F(R)AM SINE Alu -123 179 129 * 285 184 20 0 chr17 272721 272770 -85165710 - AluSp SINE Alu -124 179 130 346 137 0 0 chr17 272770 272821 -85165659 - AluJ/F(R)AM SINE Alu -123 179 129 243 149 85 0 chr17 272820 272867 -85165613 - AluY SINE Alu -123 178 128 * 262 200 20 0 chr17 272866 272916 -85165564 - AluJ/F(R)AM SINE Alu -123 179 129 * 305 62 83 0 chr17 272915 272963 -85165517 - AluY SINE Alu -123 178 127 269 89 89 0 chr17 272963 273008 -85165472 - AluY SINE Alu -125 176 128 * 296 160 20 0 chr17 273007 273057 -85165423 - AluJ/F(R)AM SINE Alu -123 179 129 * 359 98 0 0 chr17 273056 273107 -85165373 - AluJ/F(R)AM SINE Alu -123 179 129 * 378 98 0 0 chr17 273106 273157 -85165323 - AluJ/F(R)AM SINE Alu -123 179 129 331 120 20 0 chr17 273156 273206 -85165274 - AluJ/F(R)AM SINE Alu -123 179 129 * 267 106 85 0 chr17 273205 273252 -85165228 - AluYa5 SINE Alu -123 178 128 * 264 106 85 0 chr17 273251 273298 -85165182 - AluY SINE Alu -123 178 128 * 271 200 20 0 chr17 273297 273347 -85165133 - AluJ/F(R)AM SINE Alu -123 179 129 * 363 98 0 0 chr17 273346 273397 -85165083 - AluJ/F(R)AM SINE Alu -123 179 129 363 224 5 42 chr17 273396 273596 -85164884 - AluJ/F(R)AM SINE Alu -123 179 129 349 118 0 0 chr17 273595 273646 -85164834 - AluSp SINE Alu -124 179 129 * 352 118 0 0 chr17 273645 273696 -85164784 - AluJ/F(R)AM SINE Alu -123 179 129 352 118 0 0 chr17 273695 273746 -85164734 - AluSc SINE Alu -122 177 127 * 363 192 20 74 chr17 273745 274046 -85164434 - AluSc SINE Alu -122 177 127 556 93 0 0 chr17 274727 274802 -85163678 - Alu SINE Alu -9 302 228 973 158 0 6 chr17 274803 274961 -85163519 - AluSq SINE Alu -156 157 1 321 109 0 0 chr17 275266 275312 -85163168 - Alu SINE Alu -254 46 1 378 314 51 40 chr17 275325 275599 -85162881 - L1ME LINE L1 -302 5819 5543 309 281 47 0 chr17 275679 275807 -85162673 - L1ME LINE L1 -2651 5391 5258 2207 97 3 10 chr17 275987 276297 -85162183 + AluSx SINE Alu 5 312 0 200 128 64 21 chr17 276503 276550 -85161930 + CT-rich Low_complexity Low_complexity 4 52 0 1387 107 62 9 chr17 276818 277042 -85161438 - AluJo SINE Alu -76 236 1 560 190 20 0 chr17 277940 278040 -85160440 + AluSg/x SINE Alu 211 312 0 358 293 156 6 chr17 280955 281122 -85157358 - L1ME4a LINE L1 0 6121 5930 1441 249 51 35 chr17 281140 281627 -85156853 - L1MB7 LINE L1 -19 6165 5671 1407 222 43 0 chr17 283417 283746 -85154734 - L1ME4a LINE L1 -456 5728 5386 1731 72 0 0 chr17 283764 283985 -85154495 + AluSq SINE Alu 1 221 -92 2310 69 3 10 chr17 284687 284992 -85153488 - AluSc SINE Alu -6 303 1 319 272 48 0 chr17 285106 285209 -85153271 + MIR SINE MIR 100 207 -55 1917 121 0 7 chr17 285330 285619 -85152861 - AluJb SINE Alu -25 287 1 2307 76 3 3 chr17 285904 286208 -85152272 - AluY SINE Alu -7 304 1 27 0 0 0 chr17 286276 286303 -85152177 + AT_rich Low_complexity Low_complexity 1 27 0 371 310 187 0 chr17 286308 286463 -85152017 - MER5A DNA MER1_type -2 187 4 431 351 52 60 chr17 286811 287159 -85151321 - L2 LINE L2 0 3272 2928 2137 88 0 0 chr17 288449 288722 -85149758 + AluSq SINE Alu 6 278 -35 345 78 4 4 chr17 288722 288780 -85149700 - Alu SINE Alu -256 44 1 2176 113 0 3 chr17 289223 289534 -85148946 - AluSx SINE Alu -2 310 1 2119 99 3 7 chr17 289534 289826 -85148654 - AluSg SINE Alu -18 292 1 572 228 6 10 chr17 290452 290956 -85147524 + (CA)n Simple_repeat Simple_repeat 1 502 0 2526 46 0 0 chr17 291286 291590 -85146890 + AluY SINE Alu 1 304 -7 292 298 35 0 chr17 292338 292452 -85146028 + CT-rich Low_complexity Low_complexity 3 120 0 2177 96 3 6 chr17 292591 292903 -85145577 - AluSx SINE Alu -1 311 1 2182 105 0 7 chr17 295954 296258 -85142222 + AluSx SINE Alu 1 302 -10 2122 93 28 0 chr17 296340 296631 -85141849 + AluSx SINE Alu 1 299 -13 390 100 0 0 chr17 297970 298030 -85140450 + (TG)n Simple_repeat Simple_repeat 1 60 0 226 252 55 84 chr17 299027 299076 -85139404 - MIR SINE MIR -7 255 206 1864 89 0 4 chr17 299076 299345 -85139135 - AluSx SINE Alu 0 305 38 226 252 55 84 chr17 299345 299472 -85139008 - MIR SINE MIR -56 206 85 1298 82 0 0 chr17 300491 300662 -85137818 + AluSg/x SINE Alu 136 306 -4 189 0 0 0 chr17 301978 301999 -85136481 + (CACCC)n Simple_repeat Simple_repeat 3 23 0 1131 158 0 0 chr17 302626 302809 -85135671 + AluJo SINE Alu 112 294 -18 2369 66 10 3 chr17 303198 303501 -85134979 + AluSx SINE Alu 6 310 -2 2480 73 0 0 chr17 304808 305108 -85133372 - AluSx SINE Alu -12 300 1 2073 105 63 0 chr17 306673 306959 -85131521 - AluSx SINE Alu -8 304 1 2238 100 3 7 chr17 308330 308630 -85129850 - AluSg SINE Alu -11 299 1 738 171 8 0 chr17 309000 309129 -85129351 + FLAM_C SINE Alu 4 133 0 1229 37 0 0 chr17 310360 310494 -85127986 + AluY SINE Alu 1 134 -177 2197 70 49 7 chr17 310494 310780 -85127700 + AluY SINE Alu 1 298 -13 2309 46 49 7 chr17 311451 311736 -85126744 - AluY SINE Alu -14 297 1 313 68 0 0 chr17 311736 311780 -85126700 - Alu SINE Alu -264 44 1 * 353 94 16 16 chr17 311780 311824 -85126656 - AluS SINE Alu -259 44 1 182 292 191 0 chr17 313641 313730 -85124750 - L2 LINE L2 -37 3276 3171 268 320 61 53 chr17 314444 314672 -85123808 - L2 LINE L2 -462 2852 2623 876 169 0 0 chr17 315817 315947 -85122533 + FLAM_C SINE Alu 1 130 -13 514 265 116 23 chr17 315961 316176 -85122304 - MIR SINE MIR -6 256 22 815 157 0 50 chr17 316324 316464 -85122016 + FLAM_C SINE Alu 1 133 0 1732 156 10 30 chr17 316493 316795 -85121685 - AluJb SINE Alu -16 296 1 2317 120 0 0 chr17 317093 317401 -85121079 + AluSx SINE Alu 1 308 -4 482 297 102 61 chr17 317481 317679 -85120801 - L1ME4a LINE L1 -127 5994 5806 2187 99 0 33 chr17 317679 317981 -85120499 - AluSq SINE Alu -21 292 1 482 297 102 61 chr17 317981 318233 -85120247 - L1ME4a LINE L1 -315 5806 5511 2160 101 14 14 chr17 318233 318367 -85120113 + AluSg SINE Alu 1 134 -174 2365 94 0 7 chr17 318367 318674 -85119806 + AluY SINE Alu 1 305 -6 2160 101 14 14 chr17 318674 318847 -85119633 + AluSg SINE Alu 133 308 0 482 297 102 61 chr17 318847 318980 -85119500 - L1ME4a LINE L1 -610 5511 5385 22 35 0 0 chr17 319508 319537 -85118943 + AT_rich Low_complexity Low_complexity 1 29 0 2149 98 28 0 chr17 321305 321592 -85116888 + AluSx SINE Alu 1 295 -17 933 37 0 0 chr17 321954 322062 -85116418 + AluSq/x SINE Alu 1 108 -204 241 250 0 0 chr17 323040 323088 -85115392 - L2 LINE L2 -95 3218 3171 191 342 40 13 chr17 323326 323402 -85115078 - L2 LINE L2 -1172 2142 2065 2340 91 0 7 chr17 323726 324024 -85114456 + AluSx SINE Alu 6 301 -11 1769 63 5 14 chr17 324178 324399 -85114081 - AluY SINE Alu -8 303 85 248 312 9 28 chr17 324589 324698 -85113782 - L2 LINE L2 -507 2807 2701 2623 51 0 10 chr17 324745 325059 -85113421 - AluY SINE Alu 0 311 1 274 250 159 0 chr17 325201 325289 -85113191 - MIR SINE MIR -115 147 46 2214 110 0 27 chr17 325289 325590 -85112890 - AluSq SINE Alu -16 297 5 2226 127 3 6 chr17 325595 325909 -85112571 - AluSq SINE Alu 0 313 1 1296 255 56 32 chr17 326529 326941 -85111539 - MER21B LTR ERV1 -113 750 329 545 221 79 0 chr17 326968 327108 -85111372 - MER21B LTR ERV1 -615 248 98 386 220 67 47 chr17 327080 327235 -85111245 - MER21B LTR ERV1 -407 198 5 * 2131 126 0 0 chr17 327289 327582 -85110898 - AluSx SINE Alu -19 293 1 832 248 82 40 chr17 328107 328588 -85109892 - L2 LINE L2 -225 3088 2587 441 291 137 21 chr17 329390 329631 -85108849 - MLT1L LTR MaLR -8 607 339 1010 144 58 0 chr17 329660 329833 -85108647 - AluSg/x SINE Alu -9 301 119 2251 105 0 3 chr17 329859 330155 -85108325 - AluSx SINE Alu -17 295 1 444 247 153 13 chr17 330167 330317 -85108163 - MLT1L LTR MaLR -326 289 119 348 229 46 9 chr17 331399 331508 -85106972 - L1ME4a LINE L1 -63 6058 5946 372 305 97 58 chr17 331577 331931 -85106549 - L1ME4a LINE L1 -353 5768 5388 2474 67 0 0 chr17 331931 332228 -85106252 - AluY SINE Alu -14 297 1 372 305 97 58 chr17 332228 332358 -85106122 - L1ME4a LINE L1 -733 5388 5265 514 315 68 89 chr17 332366 332728 -85105752 - L1ME4a LINE L1 -896 5250 4901 1626 207 6 22 chr17 332728 332904 -85105576 - AluJb SINE Alu -3 309 139 2395 92 0 25 chr17 332904 333219 -85105261 - AluSq SINE Alu -6 307 1 1626 207 6 22 chr17 333219 333356 -85105124 - AluJb SINE Alu -173 139 1 514 315 68 89 chr17 333356 333510 -85104970 - L1ME4a LINE L1 -1245 4901 4745 837 261 77 26 chr17 333933 334244 -85104236 + L1MC4a LINE L1 5607 5933 -1875 335 307 51 7 chr17 335816 335953 -85102527 + L2 LINE L2 1596 1738 -1576 315 219 27 14 chr17 337685 337758 -85100722 + L2 LINE L2 3239 3312 -1 385 291 131 23 chr17 337774 337949 -85100531 + MIR SINE MIR 59 252 -10 21 0 0 0 chr17 338058 338079 -85100401 + AT_rich Low_complexity Low_complexity 1 21 0 2049 139 3 0 chr17 338089 338376 -85100104 - AluSx SINE Alu -24 288 1 2404 97 0 0 chr17 338378 338678 -85099802 - AluSx SINE Alu -10 302 3 1861 158 0 3 chr17 338683 338967 -85099513 - AluJb SINE Alu -17 295 13 1611 91 0 36 chr17 339023 339244 -85099236 - AluSg/x SINE Alu -16 294 82 2556 61 0 3 chr17 339250 339560 -85098920 + AluY SINE Alu 1 309 -2 1628 164 43 4 chr17 339653 339933 -85098547 + AluJo SINE Alu 1 291 -21 321 93 0 0 chr17 340055 340098 -85098382 + Alu SINE Alu 1 43 -258 1499 71 6 0 chr17 340098 340280 -85098200 + AluSg/x SINE Alu 125 307 -5 243 0 0 0 chr17 340280 340307 -85098173 + (TA)n Simple_repeat Simple_repeat 1 27 0 369 239 28 9 chr17 340308 340368 -85098112 + L1ME LINE L1 5708 5772 -349 2351 110 0 0 chr17 340368 340676 -85097804 + AluSx SINE Alu 1 308 -4 369 239 28 9 chr17 340676 340724 -85097756 + L1ME LINE L1 5772 5818 -303 885 142 155 7 chr17 340728 340883 -85097597 + FRAM SINE Alu 1 172 -4 1916 204 108 52 chr17 341563 341793 -85096687 - L1ME2 LINE L1 -63 6101 5885 2617 55 3 0 chr17 341793 342103 -85096377 - AluY SINE Alu 0 311 1 1916 204 108 52 chr17 342103 342504 -85095976 - L1ME2 LINE L1 -279 5885 5435 593 194 167 7 chr17 342510 342654 -85095826 - AluJo SINE Alu -109 203 37 571 150 37 1 chr17 342655 342782 -85095698 - L1M1 LINE L1 -734 5430 5299 247 207 0 0 chr17 342924 342982 -85095498 - L1ME2 LINE L1 -968 5178 5121 573 138 0 11 chr17 343123 343217 -85095263 + LTR23 LTR ERV1 313 405 -32 22 35 0 0 chr17 343224 343253 -85095227 + AT_rich Low_complexity Low_complexity 1 29 0 2269 112 0 40 chr17 343281 343604 -85094876 - AluSx SINE Alu -2 310 1 315 261 56 99 chr17 343605 343630 -85094850 - MIR SINE MIR -49 213 188 2598 33 0 23 chr17 343630 343935 -85094545 - AluY SINE Alu -13 298 1 315 261 56 99 chr17 343935 344070 -85094410 - MIR SINE MIR -74 188 60 2208 112 3 0 chr17 345026 345322 -85093158 + AluSq SINE Alu 1 297 -16 591 204 18 0 chr17 345909 346022 -85092458 - FLAM_A SINE Alu -18 115 1 21 36 0 0 chr17 346416 346444 -85092036 + AT_rich Low_complexity Low_complexity 1 28 0 2320 78 41 0 chr17 347882 348177 -85090303 - AluSp SINE Alu -2 311 5 2007 93 7 7 chr17 348635 348905 -85089575 - AluSp SINE Alu 0 313 44 23 0 0 0 chr17 349029 349052 -85089428 + AT_rich Low_complexity Low_complexity 1 23 0 2169 102 7 0 chr17 349052 349346 -85089134 + AluSp SINE Alu 1 296 -17 932 192 43 14 chr17 349469 349677 -85088803 - AluJb SINE Alu -13 299 86 598 197 87 44 chr17 350194 350332 -85088148 - MER4C LTR ERV1 0 465 316 3823 67 34 0 chr17 350332 350828 -85087652 + LTR10D LTR ERV1 1 513 0 598 197 87 44 chr17 350828 350872 -85087608 - MER4C LTR ERV1 -149 316 275 890 130 162 7 chr17 351465 351619 -85086861 + FRAM SINE Alu 1 172 -4 824 103 0 9 chr17 351644 351751 -85086729 - AluSg/x SINE Alu -129 183 78 1513 120 0 5 chr17 351751 351960 -85086520 - AluSx SINE Alu -100 212 5 1230 178 54 25 chr17 351979 352221 -85086259 - AluJo SINE Alu -25 287 39 2258 73 16 36 chr17 352271 352574 -85085906 - AluSg SINE Alu -13 297 1 569 15 0 0 chr17 352816 352904 -85085576 + AluY SINE Alu 217 304 0 2678 37 3 0 chr17 352914 353213 -85085267 + AluY SINE Alu 1 300 -11 1180 167 90 2 chr17 353213 353463 -85085017 - L1MD2 LINE L1 -429 5930 5657 824 207 7 0 chr17 353472 353617 -85084863 + AluSg/x SINE Alu 135 280 -32 192 152 0 0 chr17 353630 353663 -85084817 + (TGGA)n Simple_repeat Simple_repeat 1 33 0 3100 84 40 2 chr17 353766 354219 -85084261 + LTR10D LTR ERV1 44 513 0 285 276 0 13 chr17 354272 354348 -85084132 - LTR59 LTR ERV1 -169 428 354 * 297 225 100 0 chr17 354327 354407 -85084073 - MER4C LTR ERV1 -201 264 177 335 200 100 0 chr17 354412 354492 -85083988 - MER4C LTR ERV1 -201 264 177 250 224 158 0 chr17 354497 354573 -85083907 - MER4C LTR ERV1 -201 264 177 335 200 100 0 chr17 354578 354658 -85083822 - MER4C LTR ERV1 -201 264 177 300 225 100 0 chr17 354663 354743 -85083737 - MER4C LTR ERV1 -201 264 177 321 213 100 0 chr17 354748 354828 -85083652 - MER4C LTR ERV1 -201 264 177 280 179 167 0 chr17 354833 354911 -85083569 - MER4C LTR ERV1 -201 264 174 * 654 152 54 121 chr17 354887 355232 -85083248 - MER4C LTR ERV1 -283 381 1 198 230 23 126 chr17 358435 358522 -85079958 + MIR SINE MIR 79 156 -106 488 291 105 0 chr17 358903 359075 -85079405 + MIR SINE MIR 59 248 -14 181 279 81 62 chr17 359897 360012 -85078468 - MIR SINE MIR -50 212 92 612 196 8 45 chr17 360012 360145 -85078335 - FLAM_A SINE Alu -5 128 1 181 279 81 62 chr17 360145 360190 -85078290 - MIR SINE MIR -170 92 49 274 309 204 25 chr17 361652 362015 -85076465 + L2 LINE L2 2046 2473 -841 519 178 11 0 chr17 366038 366128 -85072352 - FLAM_A SINE Alu -41 101 11 1731 143 66 21 chr17 366327 366614 -85071866 + AluJb SINE Alu 1 300 -12 783 134 15 22 chr17 366623 366757 -85071723 + FLAM_C SINE Alu 1 133 0 1760 124 0 0 chr17 370146 370388 -85068092 - AluSq SINE Alu -2 311 70 239 125 0 0 chr17 370388 370428 -85068052 - Alu SINE Alu -135 168 129 187 264 126 35 chr17 370452 370539 -85067941 + MIR SINE MIR 57 151 -111 824 100 0 50 chr17 370583 370723 -85067757 + FLAM_C SINE Alu 1 133 0 2109 98 35 41 chr17 370732 371047 -85067433 + AluSq SINE Alu 1 313 0 1881 153 21 0 chr17 371354 371642 -85066838 + AluJb SINE Alu 1 294 -18 2416 84 7 0 chr17 371825 372124 -85066356 + AluSx SINE Alu 1 301 -11 215 262 0 117 chr17 372459 372562 -85065918 - MIR SINE MIR -107 155 65 2494 87 0 10 chr17 372909 373220 -85065260 + AluSx SINE Alu 1 308 -4 2312 120 0 0 chr17 373267 373576 -85064904 + AluSg SINE Alu 1 309 -1 305 183 211 29 chr17 373914 374018 -85064462 - MER5A DNA MER1_type -3 186 64 2139 105 3 43 chr17 374214 374538 -85063942 - AluSx SINE Alu -1 311 1 2185 106 39 0 chr17 374909 375192 -85063288 + AluSx SINE Alu 1 294 -18 667 161 24 0 chr17 375239 375363 -85063117 + FLAM_C SINE Alu 1 127 -6 1531 174 68 20 chr17 375607 375900 -85062580 + AluJo SINE Alu 1 307 -5 879 144 0 0 chr17 375903 376035 -85062445 + FLAM_C SINE Alu 2 133 0 204 192 58 0 chr17 377583 377709 -85060771 + C-rich Low_complexity Low_complexity 1 133 0 186 174 0 0 chr17 377815 377861 -85060619 + G-rich Low_complexity Low_complexity 4 49 0 2117 87 4 0 chr17 378418 378712 -85059768 + AluSx SINE Alu 20 314 0 322 170 50 70 chr17 379006 379106 -85059374 + MIR3 SINE MIR 110 207 -1 2625 64 0 0 chr17 379842 380153 -85058327 + AluY SINE Alu 1 311 0 227 280 153 8 chr17 380414 380532 -85057948 + L2 LINE L2 3164 3298 -15 465 286 127 18 chr17 380549 380644 -85057836 - MIR SINE MIR -11 251 168 264 30 0 0 chr17 380644 380677 -85057803 + (TG)n Simple_repeat Simple_repeat 2 34 0 465 286 127 18 chr17 380677 380801 -85057679 - MIR SINE MIR -94 168 8 350 264 19 38 chr17 380962 381068 -85057412 - MIR SINE MIR -46 216 113 1466 186 3 40 chr17 381690 381991 -85056489 + AluJb SINE Alu 3 292 -20 576 216 78 39 chr17 382168 382400 -85056080 + AluJo SINE Alu 5 245 -67 303 26 0 0 chr17 382400 382438 -85056042 + AluJ/FLAM SINE Alu 39 76 -226 494 235 70 50 chr17 382438 382638 -85055842 + AluJb SINE Alu 11 214 -98 461 103 0 0 chr17 382635 382703 -85055777 + AluJ/FLAM SINE Alu 11 78 -234 * 1753 146 38 0 chr17 382703 382964 -85055516 + AluJb SINE Alu 13 283 -29 441 0 0 0 chr17 382964 383013 -85055467 + (CA)n Simple_repeat Simple_repeat 2 50 0 312 283 128 11 chr17 383401 383581 -85054899 + MIR SINE MIR 21 221 -41 1334 200 35 24 chr17 384044 384334 -85054146 + AluJb SINE Alu 1 293 -19 608 152 9 0 chr17 384349 384454 -85054026 - FLAM_C SINE Alu -37 106 1 2330 57 0 4 chr17 384537 384817 -85053663 + AluY SINE Alu 31 309 -2 1641 164 43 4 chr17 384910 385190 -85053290 + AluJo SINE Alu 1 291 -21 237 146 49 0 chr17 385312 385353 -85053127 + Alu SINE Alu 1 43 -259 1170 119 12 0 chr17 385353 385513 -85052967 + AluSg/x SINE Alu 125 286 -26 732 131 0 0 chr17 385613 385720 -85052760 - AluSq/x SINE Alu -203 109 3 859 195 153 0 chr17 385730 385992 -85052488 - L1M4 LINE L1 -869 5277 4976 468 0 0 0 chr17 386176 386228 -85052252 + (TG)n Simple_repeat Simple_repeat 1 52 0 2318 39 11 18 chr17 386228 386508 -85051972 - AluY SINE Alu -33 278 1 190 89 67 22 chr17 386543 386588 -85051892 + CT-rich Low_complexity Low_complexity 4 50 0 2101 187 102 20 chr17 386848 387346 -85051134 + L1MB7 LINE L1 5627 6165 -19 1688 210 13 3 chr17 387443 387752 -85050728 + AluJo SINE Alu 1 312 0 7186 39 2 0 chr17 389176 390534 -85047946 - L1PA4 LINE L1 -1 6154 4795 25477 31 4 7 chr17 390534 393779 -85044701 + L1PA4 LINE L1 1575 4810 -1336 279 247 65 0 chr17 393792 393869 -85044611 - HsTC2 DNA Tc2 -546 1352 1271 677 258 117 11 chr17 393876 394159 -85044321 - L1MC4 LINE L1 0 8042 7730 25 83 0 0 chr17 394397 394457 -85044023 + AT_rich Low_complexity Low_complexity 1 60 0 25 0 0 0 chr17 395021 395046 -85043434 + AT_rich Low_complexity Low_complexity 1 25 0 742 212 0 91 chr17 395121 395148 -85043332 + L1MA10 LINE L1 6124 6152 -182 2129 118 3 7 chr17 395148 395459 -85043021 - AluSg SINE Alu 0 310 2 742 212 0 91 chr17 395459 395662 -85042818 + L1MA10 LINE L1 6152 6333 -1 227 195 0 0 chr17 395998 396039 -85042441 + (TCTG)n Simple_repeat Simple_repeat 1 41 0 1979 170 0 0 chr17 396133 396433 -85042047 + AluSx SINE Alu 1 300 -12 262 267 61 30 chr17 396627 396758 -85041722 + MIR SINE MIR 77 211 -51 1566 28 0 42 chr17 397586 397798 -85040682 + L1PA3 LINE L1 5953 6155 0 394 254 60 0 chr17 399399 399533 -85038947 + L1MD2 LINE L1 6206 6347 -12 757 168 32 32 chr17 399534 399724 -85038756 + HsTC2 DNA Tc2 1602 1791 -107 2035 103 3 88 chr17 400945 401265 -85037215 - AluSx SINE Alu -19 293 1 10409 31 14 154 chr17 401345 402949 -85035531 + SVA Other Other 7 1386 0 194 287 83 37 chr17 403601 403709 -85034771 - MIR SINE MIR -148 114 2 1917 172 7 0 chr17 404386 404689 -85033791 + AluJb SINE Alu 1 305 -7 1909 134 0 19 chr17 407052 407366 -85031114 - AluSx SINE Alu -4 308 1 1668 168 7 10 chr17 407366 407662 -85030818 - AluJb SINE Alu -17 295 1 25 51 0 0 chr17 407705 407744 -85030736 + AT_rich Low_complexity Low_complexity 1 39 0 350 171 66 0 chr17 407771 407847 -85030633 - L1MB8 LINE L1 -2 6176 6096 2657 181 18 30 chr17 407867 408436 -85030044 - L1MB4 LINE L1 -12 6168 5607 2103 94 23 3 chr17 409710 410009 -85028471 - AluSx SINE Alu -7 305 1 339 273 104 50 chr17 410499 410727 -85027753 - MIR SINE MIR -19 243 23 2414 68 0 0 chr17 412359 412670 -85025810 - AluY SINE Alu 0 311 1 226 228 140 0 chr17 412777 412834 -85025646 + L2 LINE L2 3207 3271 -1 374 159 29 14 chr17 413105 413174 -85025306 - MLT1K LTR MaLR -8 580 511 333 0 0 0 chr17 413288 413325 -85025155 + (GA)n Simple_repeat Simple_repeat 2 38 0 387 0 0 0 chr17 413348 413391 -85025089 + (TG)n Simple_repeat Simple_repeat 2 44 0 1887 100 59 0 chr17 413524 413794 -85024686 + AluSc SINE Alu 11 296 -13 305 305 104 19 chr17 413935 414089 -85024391 - MIR SINE MIR -79 183 17 345 130 40 30 chr17 414121 414221 -85024259 + CT-rich Low_complexity Low_complexity 2 102 0 1912 143 13 0 chr17 414244 414552 -85023928 - AluSx SINE Alu 0 312 1 2286 96 0 0 chr17 415586 415889 -85022591 - AluSc SINE Alu -6 303 1 1702 163 10 10 chr17 415892 416186 -85022294 - AluSx SINE Alu -14 298 5 253 188 125 0 chr17 417221 417285 -85021195 + MER94 DNA DNA 4 75 -59 2204 119 6 26 chr17 417431 417775 -85020705 - MER1B DNA MER1_type 0 337 1 249 260 185 17 chr17 418031 418204 -85020276 + L2 LINE L2 1597 1798 -1516 867 198 8 118 chr17 418206 418443 -85020037 - MER58A DNA MER1_type -3 221 11 1068 282 72 32 chr17 418467 418571 -85019909 + L2 LINE L2 1839 1937 -1377 1719 110 0 4 chr17 418571 418808 -85019672 - AluSg SINE Alu -19 291 56 2235 98 0 0 chr17 418813 419119 -85019361 - AluSq SINE Alu -7 306 1 1068 282 72 32 chr17 419119 419479 -85019001 + L2 LINE L2 1940 2328 -986 2152 98 3 0 chr17 419483 419778 -85018702 - AluSq SINE Alu -17 296 1 1130 233 32 0 chr17 419778 420027 -85018453 - MSTD-int LTR MaLR -1477 258 2 1166 194 85 62 chr17 420027 420481 -85017999 - MSTD LTR MaLR -2 426 1 768 311 81 58 chr17 420548 421123 -85017357 + L2 LINE L2 2370 2981 -332 2293 78 0 0 chr17 421123 421417 -85017063 + AluY SINE Alu 1 294 -17 768 311 81 58 chr17 421417 421757 -85016723 + L2 LINE L2 2981 3312 -1 1763 148 18 0 chr17 422283 422567 -85015913 - AluJb SINE Alu -13 299 11 309 26 0 0 chr17 422576 422614 -85015866 + (CCTG)n Simple_repeat Simple_repeat 2 39 0 42718 59 4 4 chr17 425072 430778 -85007702 - L1P2 LINE L1 -439 5715 11 313 285 40 99 chr17 430830 430981 -85007499 + MIR3 SINE MIR 56 197 -11 2287 88 0 3 chr17 431089 431395 -85007085 - AluSq SINE Alu -8 305 1 1625 156 0 8 chr17 431734 431990 -85006490 - AluJb SINE Alu -54 258 5 1650 182 7 0 chr17 434385 434682 -85003798 - AluJb SINE Alu -13 299 1 292 194 0 0 chr17 434948 435010 -85003470 + L1MA3 LINE L1 5104 5165 -981 519 118 24 0 chr17 435064 435149 -85003331 - L1M LINE L1 -784 5396 5310 2093 181 37 18 chr17 436534 436988 -85001492 + L1MA3 LINE L1 5838 6300 -5 1269 172 38 34 chr17 437104 437395 -85001085 - AluJo SINE Alu -20 292 1 189 94 0 0 chr17 439037 439069 -84999411 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 2069 90 11 0 chr17 439072 439350 -84999130 - AluSp SINE Alu -32 281 1 279 0 0 0 chr17 439515 439546 -84998934 + (TG)n Simple_repeat Simple_repeat 1 31 0 2202 92 0 19 chr17 439563 439880 -84998600 - AluY SINE Alu 0 311 1 198 0 0 0 chr17 441557 441579 -84996901 + (TG)n Simple_repeat Simple_repeat 1 22 0 2007 90 14 4 chr17 441579 441858 -84996622 - AluSq SINE Alu -31 282 1 183 216 0 0 chr17 442587 442624 -84995856 + L2 LINE L2 3232 3268 -4 1654 166 7 24 chr17 442670 442966 -84995514 - AluSx SINE Alu -21 291 1 1347 143 4 30 chr17 443131 443361 -84995119 - AluJo SINE Alu -16 296 73 1151 211 12 37 chr17 443616 443858 -84994622 - L1MC1 LINE L1 0 6333 6098 946 168 0 6 chr17 443862 444023 -84994457 - FAM SINE Alu -10 175 16 1793 170 10 3 chr17 444065 444371 -84994109 + AluJb SINE Alu 1 308 -4 273 151 0 0 chr17 444379 444432 -84994048 + GA-rich Low_complexity Low_complexity 4 56 0 2123 113 0 10 chr17 445375 445685 -84992795 + AluSx SINE Alu 1 307 -5 456 282 33 74 chr17 446303 446693 -84991787 + L1MEd LINE L1 895 1317 -1173 1807 159 0 7 chr17 446709 447010 -84991470 + AluJo SINE Alu 1 299 -13 344 268 212 45 chr17 447014 447375 -84991105 + L1ME LINE L1 5394 5822 -348 1132 180 0 9 chr17 447876 448087 -84990393 + AluJo SINE Alu 74 282 -30 2095 97 28 0 chr17 448502 448791 -84989689 - AluSx SINE Alu -15 297 1 1871 197 217 12 chr17 448791 449284 -84989196 + MLT1G1 LTR MaLR 2 595 0 245 116 23 0 chr17 450370 450413 -84988067 + Alu SINE Alu 1 44 -258 1933 119 0 0 chr17 450413 450707 -84987773 + AluY SINE Alu 5 298 -13 2463 48 3 0 chr17 450952 451262 -84987218 + AluY SINE Alu 1 311 0 225 0 0 0 chr17 453210 453235 -84985245 + (TG)n Simple_repeat Simple_repeat 2 26 0 23 0 0 0 chr17 455551 455574 -84982906 + AT_rich Low_complexity Low_complexity 1 23 0 1940 110 11 0 chr17 455727 456036 -84982444 - AluSx SINE Alu 0 312 1 675 227 28 90 chr17 456570 456820 -84981660 + MIR SINE MIR 23 248 -14 410 257 114 0 chr17 457213 457318 -84981162 - MIR SINE MIR -36 226 110 2306 70 0 7 chr17 457695 457995 -84980485 + AluSc SINE Alu 1 298 -11 216 0 0 0 chr17 458002 458026 -84980454 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2106 91 0 0 chr17 458865 459141 -84979339 + AluY SINE Alu 1 276 -35 186 43 0 0 chr17 459141 459164 -84979316 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 934 129 24 0 chr17 459165 459335 -84979145 + GA-rich Low_complexity Low_complexity 4 177 0 306 0 0 0 chr17 459337 459371 -84979109 + (CAGG)n Simple_repeat Simple_repeat 2 35 0 1749 151 18 0 chr17 459380 459664 -84978816 + AluJb SINE Alu 11 299 -13 789 311 82 58 chr17 460190 460529 -84977951 - L2 LINE L2 -1 3312 2983 2306 75 0 0 chr17 460529 460823 -84977657 - AluY SINE Alu -17 294 1 789 311 82 58 chr17 460823 461398 -84977082 - L2 LINE L2 -330 2983 2370 1166 191 82 59 chr17 461465 461919 -84976561 + MSTD LTR MaLR 1 426 -2 1157 225 32 0 chr17 461919 462168 -84976312 + MSTD-int LTR MaLR 2 258 -1477 2152 98 3 0 chr17 462168 462463 -84976017 + AluSq SINE Alu 1 296 -17 1068 282 72 32 chr17 462467 462827 -84975653 - L2 LINE L2 -986 2328 1984 2182 108 0 0 chr17 462827 463133 -84975347 + AluSq SINE Alu 1 306 -7 1719 110 0 4 chr17 463138 463375 -84975105 + AluSg SINE Alu 56 291 -19 1068 282 72 32 chr17 463375 463479 -84975001 - L2 LINE L2 -1333 1981 1839 867 198 8 118 chr17 463503 463740 -84974740 + MER58A DNA MER1_type 11 221 -3 243 259 184 23 chr17 463742 463916 -84974564 - L2 LINE L2 -1516 1798 1597 2215 116 6 26 chr17 464171 464515 -84973965 + MER1B DNA MER1_type 1 337 0 253 188 125 0 chr17 464661 464725 -84973755 - MER94 DNA DNA -59 75 4 1771 157 10 10 chr17 465760 466059 -84972421 + AluSx SINE Alu 5 303 -9 2286 96 0 0 chr17 466062 466365 -84972115 + AluSc SINE Alu 1 303 -6 1833 147 16 0 chr17 467384 467690 -84970790 + AluSx SINE Alu 1 311 -1 345 130 40 30 chr17 467719 467819 -84970661 + GA-rich Low_complexity Low_complexity 2 102 0 305 305 104 19 chr17 467851 468005 -84970475 + MIR SINE MIR 17 183 -79 1872 104 59 0 chr17 468146 468416 -84970064 - AluSc SINE Alu -13 296 11 423 0 0 0 chr17 468549 468596 -84969884 + (CA)n Simple_repeat Simple_repeat 2 48 0 405 0 0 0 chr17 468619 468664 -84969816 + (TC)n Simple_repeat Simple_repeat 2 46 0 2189 92 0 3 chr17 469049 469355 -84969125 + AluSc SINE Alu 1 305 -4 1180 62 0 7 chr17 469682 469828 -84968652 + AluSq/x SINE Alu 1 145 -168 2188 110 0 0 chr17 469828 470129 -84968351 + AluSx SINE Alu 1 301 -11 233 270 120 41 chr17 470142 470409 -84968071 + L1M4 LINE L1 3657 3944 -2202 418 281 35 9 chr17 470497 470611 -84967869 + L2 LINE L2 3197 3313 0 1645 181 35 84 chr17 470693 470934 -84967546 - Charlie1 DNA MER1_type -1 2760 2509 188 35 35 0 chr17 470934 470963 -84967517 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 1986 120 0 0 chr17 470967 471251 -84967229 - AluSg SINE Alu -26 284 1 1645 181 35 84 chr17 471251 471458 -84967022 - Charlie1 DNA MER1_type -255 2506 2329 1474 219 40 26 chr17 471461 471808 -84966672 - MLT1A1 LTR MaLR -2 363 12 712 167 7 211 chr17 471811 472105 -84966375 - Charlie1 DNA MER1_type -341 2420 2187 1023 261 71 25 chr17 472105 472499 -84965981 + L1MCc LINE L1 17 428 -5995 * 1106 226 46 77 chr17 472497 473127 -84965353 + L1MCc LINE L1 1278 1909 -4887 749 251 44 36 chr17 473122 473397 -84965083 + L1MCc LINE L1 2232 2508 -4614 * 285 294 46 0 chr17 473392 473501 -84964979 + L1MA9 LINE L1 6161 6274 -38 * 776 181 0 8 chr17 473533 473666 -84964814 + FLAM_A SINE Alu 1 132 -1 33 0 0 0 chr17 473691 473724 -84964756 + AT_rich Low_complexity Low_complexity 1 33 0 333 255 59 93 chr17 473732 473936 -84964544 + L1MCc LINE L1 2597 2793 -4329 275 102 61 0 chr17 473946 473995 -84964485 + L1MCc LINE L1 2920 2971 -4151 1583 240 108 14 chr17 473996 474496 -84963984 + L1M4 LINE L1 4074 4620 -1526 2082 106 3 7 chr17 474521 474824 -84963656 + AluSq SINE Alu 1 302 -11 1952 164 11 35 chr17 475142 475514 -84962966 + MER47A DNA MER2_type 4 366 0 1268 191 29 51 chr17 475537 475851 -84962629 + AluJo SINE Alu 4 310 -2 1652 191 7 10 chr17 475853 476157 -84962323 + AluJo SINE Alu 1 303 -9 1662 162 13 26 chr17 476681 476819 -84961661 + AluJo SINE Alu 1 139 -173 2074 109 0 3 chr17 476819 477112 -84961368 + AluSx SINE Alu 1 292 -20 2064 105 3 3 chr17 477112 477407 -84961073 + AluSc SINE Alu 1 296 -13 1662 162 13 26 chr17 477407 477570 -84960910 + AluJo SINE Alu 137 299 -13 406 207 256 0 chr17 477592 477713 -84960767 - MIR SINE MIR -62 200 49 2014 124 101 20 chr17 477957 478304 -84960176 + THE1C LTR MaLR 1 375 0 741 223 66 18 chr17 479124 479280 -84959200 - AluJo SINE Alu -12 300 134 2139 126 0 0 chr17 479280 479589 -84958891 - AluSx SINE Alu -3 309 1 189 320 90 58 chr17 479647 479803 -84958677 - MIR SINE MIR -20 242 82 527 316 163 14 chr17 479868 480150 -84958330 + L3 LINE CR1 590 913 -664 806 291 84 7 chr17 480156 480441 -84958039 + MER102b DNA MER1_type 35 341 0 405 252 72 9 chr17 480441 480552 -84957928 + L3 LINE CR1 907 1024 -553 1412 258 112 38 chr17 480801 481308 -84957172 + L3 LINE CR1 1010 1554 -23 1460 198 12 1 chr17 481327 481816 -84956664 + MER44D DNA MER2_type 1 604 -1 1095 53 0 0 chr17 482536 482668 -84955812 + AluSg SINE Alu 1 132 -178 2112 113 7 0 chr17 482669 482971 -84955509 + AluSg SINE Alu 1 304 -6 1461 145 4 0 chr17 483028 483255 -84955225 + MER44D DNA MER2_type 322 604 -1 1342 172 29 44 chr17 483266 483539 -84954941 + AluJo SINE Alu 12 280 -32 376 241 0 0 chr17 484585 484668 -84953812 - AluJo SINE Alu -3 299 217 827 160 7 7 chr17 484671 484821 -84953659 - AluJo SINE Alu -162 150 1 318 244 61 0 chr17 485023 485105 -84953375 + MIR3 SINE MIR 114 200 -8 214 356 53 53 chr17 485127 485335 -84953145 - L2 LINE L2 -220 3052 2845 1790 148 3 10 chr17 485370 485668 -84952812 - AluJb SINE Alu -16 296 1 1000 128 12 6 chr17 486608 486772 -84951708 - AluSg/x SINE Alu -9 301 137 1897 149 0 0 chr17 487980 488268 -84950212 + AluSx SINE Alu 13 300 -12 1603 166 7 0 chr17 488279 488550 -84949930 + AluJo SINE Alu 40 312 0 1838 137 10 3 chr17 488703 489009 -84949471 + AluSx SINE Alu 1 308 -4 918 227 21 5 chr17 489368 489562 -84948918 + MER58A DNA MER1_type 28 224 0 1171 233 129 20 chr17 489571 489919 -84948561 + L1ME3A LINE L1 5775 6160 -10 21 0 0 0 chr17 489924 489945 -84948535 + AT_rich Low_complexity Low_complexity 1 21 0 2066 100 0 27 chr17 490078 490378 -84948102 + AluSq SINE Alu 1 292 -21 2099 95 7 14 chr17 490859 491155 -84947325 + AluSg SINE Alu 1 294 -16 649 258 27 5 chr17 491258 491444 -84947036 + AluJo SINE Alu 120 309 -3 2177 93 6 13 chr17 491452 491763 -84946717 + AluSg SINE Alu 1 309 -1 1608 183 0 10 chr17 491992 492287 -84946193 + AluSx SINE Alu 1 292 -20 812 134 0 0 chr17 492869 492988 -84945492 - AluJb SINE Alu -12 300 182 332 73 0 0 chr17 492988 493029 -84945451 - Alu SINE Alu -245 63 23 1508 157 0 88 chr17 494375 494523 -84943957 + AluJo SINE Alu 1 108 -204 1905 122 0 17 chr17 494523 494811 -84943669 + AluSc SINE Alu 1 283 -26 1508 157 0 88 chr17 494811 494981 -84943499 + AluJo SINE Alu 108 291 -21 22 0 0 0 chr17 495293 495315 -84943165 + AT_rich Low_complexity Low_complexity 1 22 0 2233 101 0 0 chr17 495325 495622 -84942858 + AluSc SINE Alu 1 297 -12 223 259 52 0 chr17 495691 495749 -84942731 + L2 LINE L2 3151 3211 -61 266 290 154 43 chr17 495806 496085 -84942395 + L2 LINE L2 2448 2757 -557 245 310 9 35 chr17 496095 496211 -84942269 + Charlie7 DNA MER1_type 1 113 -2499 2310 85 7 0 chr17 496308 496613 -84941867 + AluSq SINE Alu 1 307 -6 1614 182 23 10 chr17 496635 496943 -84941537 + AluJo SINE Alu 1 312 0 4483 155 78 35 chr17 497124 498038 -84940442 - LTR13 LTR ERVK 0 954 2 362 323 0 23 chr17 498071 498201 -84940279 + L2 LINE L2 2942 3068 -245 317 284 44 77 chr17 498327 498510 -84939970 + L2 LINE L2 3137 3313 0 382 265 38 30 chr17 498632 498764 -84939716 + L2 LINE L2 3140 3272 0 2068 120 7 0 chr17 498933 499241 -84939239 + AluSq SINE Alu 1 310 -3 251 159 48 0 chr17 499702 499765 -84938715 + L1MA8 LINE L1 6225 6290 -1 1644 100 151 12 chr17 499766 500017 -84938463 + AluSx SINE Alu 1 286 -16 198 0 0 0 chr17 500020 500042 -84938438 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 1298 158 22 13 chr17 500055 500283 -84938197 + AluJb SINE Alu 58 287 -25 2187 101 0 0 chr17 500886 501184 -84937296 - AluY SINE Alu -13 298 1 2119 106 3 3 chr17 501246 501547 -84936933 - AluSg SINE Alu -9 301 1 481 146 0 0 chr17 501790 501872 -84936608 + L1PB3 LINE L1 6073 6154 0 1021 99 0 7 chr17 502140 502281 -84936199 + FRAM SINE Alu 18 157 -19 2233 97 3 0 chr17 502439 502749 -84935731 + AluSx SINE Alu 1 311 -1 2183 81 0 16 chr17 502826 503133 -84935347 + AluSx SINE Alu 1 302 -10 2445 49 7 0 chr17 504420 504724 -84933756 - AluSg SINE Alu -4 306 1 191 387 0 40 chr17 504780 504855 -84933625 + MIR SINE MIR 33 104 -158 22 70 0 0 chr17 505159 505202 -84933278 + AT_rich Low_complexity Low_complexity 1 43 0 327 154 35 71 chr17 505256 505343 -84933137 + AluYb8 SINE Alu 120 195 -113 664 72 0 52 chr17 505394 505491 -84932989 + FRAM SINE Alu 55 146 -30 327 234 109 70 chr17 505502 505630 -84932850 + L1ME4a LINE L1 5794 5926 -195 254 236 69 0 chr17 505828 505900 -84932580 - L1ME1 LINE L1 -8 6158 6082 1515 136 140 15 chr17 505903 506168 -84932312 + AluSx SINE Alu 1 298 -4 1129 184 0 10 chr17 506309 506516 -84931964 - AluJo SINE Alu -107 205 1 456 282 33 74 chr17 506532 506922 -84931558 - L1MEd LINE L1 -1173 1317 895 2163 125 0 13 chr17 508318 508629 -84929851 - AluSx SINE Alu -5 307 1 336 350 29 22 chr17 509440 509577 -84928903 - L2 LINE L2 -1 3271 3134 918 223 23 11 chr17 512327 512592 -84925888 + L1M4 LINE L1 4986 5253 -893 482 88 0 0 chr17 612830 612898 -84825582 - Alu SINE Alu -232 78 11 1876 124 9 73 chr17 612901 613216 -84825264 - AluSx SINE Alu -17 295 1 2062 66 0 0 chr17 613456 613698 -84824782 + AluSq SINE Alu 1 242 -71 812 158 0 0 chr17 614669 614789 -84823691 + AluJo SINE Alu 1 120 -192 1037 161 0 22 chr17 614790 614970 -84823510 - FRAM SINE Alu 0 176 1 21 36 0 0 chr17 614983 615011 -84823469 + AT_rich Low_complexity Low_complexity 1 28 0 935 124 0 28 chr17 615033 615178 -84823302 - FLAM_C SINE Alu -2 141 1 255 167 0 50 chr17 615196 615256 -84823224 + AluJo SINE Alu 130 186 -116 721 185 52 0 chr17 615281 615416 -84823064 + FRAM SINE Alu 10 151 -25 2240 113 0 28 chr17 615717 616035 -84822445 - AluSq SINE Alu 0 313 5 1071 83 0 0 chr17 617501 617634 -84820846 + AluSq/x SINE Alu 1 133 -179 1804 167 17 0 chr17 617636 617936 -84820544 + AluJb SINE Alu 1 305 -7 210 118 0 0 chr17 617936 617970 -84820510 + (GGGA)n Simple_repeat Simple_repeat 3 36 0 189 132 38 19 chr17 617963 618016 -84820464 + GA-rich Low_complexity Low_complexity 1 54 0 * 2134 118 17 0 chr17 618174 618463 -84820017 - AluSq SINE Alu -19 294 1 180 0 0 0 chr17 618472 618492 -84819988 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 2069 128 3 0 chr17 618492 618774 -84819706 - AluSx SINE Alu -29 283 1 2461 82 0 0 chr17 619926 620229 -84818251 - AluY SINE Alu -8 303 1 1928 139 35 3 chr17 620268 620555 -84817925 - AluJb SINE Alu -16 296 1 1279 226 35 41 chr17 620716 621083 -84817397 - MLT1A1 LTR MaLR 0 365 1 2294 86 3 13 chr17 621102 621404 -84817076 + AluSx SINE Alu 1 299 -13 281 297 0 0 chr17 621492 621556 -84816924 - MER2 DNA MER2_type 0 345 282 * 365 225 85 70 chr17 621531 621660 -84816820 - MER8 DNA MER2_type -60 179 49 1050 130 62 0 chr17 621799 621961 -84816519 - AluSg/x SINE Alu -7 305 134 2203 107 3 7 chr17 621961 622260 -84816220 - AluSg SINE Alu -12 298 1 844 136 0 0 chr17 622910 623083 -84815397 + FLAM_C SINE Alu 2 174 0 1059 109 24 6 chr17 623662 623827 -84814653 - Tigger5 DNA MER2_type 0 2323 2156 180 267 50 0 chr17 624474 624534 -84813946 - L2 LINE L2 -1406 1908 1846 180 267 50 0 chr17 624994 625054 -84813426 - L2 LINE L2 -1406 1908 1846 180 267 50 0 chr17 625189 625249 -84813231 - L2 LINE L2 -1406 1908 1846 183 267 50 0 chr17 625319 625379 -84813101 - L2 LINE L2 -1406 1908 1846 180 267 50 0 chr17 625514 625574 -84812906 - L2 LINE L2 -1406 1908 1846 180 267 50 0 chr17 625644 625704 -84812776 - L2 LINE L2 -1406 1908 1846 193 250 50 0 chr17 625774 625834 -84812646 - L2 LINE L2 -1406 1908 1846 183 267 50 0 chr17 625969 626029 -84812451 - L2 LINE L2 -1406 1908 1846 180 267 50 0 chr17 626164 626224 -84812256 - L2 LINE L2 -1406 1908 1846 193 250 50 0 chr17 626424 626484 -84811996 - L2 LINE L2 -1406 1908 1846 1192 179 0 9 chr17 627468 627686 -84810794 + MER46A DNA MER2_type 21 236 0 237 254 15 0 chr17 629963 630030 -84808450 + MIR SINE MIR 54 121 -141 209 193 0 18 chr17 631190 631247 -84807233 + GA-rich Low_complexity Low_complexity 2 57 0 23 0 0 0 chr17 632863 632886 -84805594 + AT_rich Low_complexity Low_complexity 1 23 0 2184 114 10 0 chr17 634677 634974 -84803506 - AluSx SINE Alu -12 300 1 823 147 0 16 chr17 634974 635103 -84803377 - AluJo/FLAM SINE Alu -185 127 1 2060 97 10 33 chr17 635248 635547 -84802933 - AluSx SINE Alu -20 292 1 329 287 66 12 chr17 635708 635813 -84802667 + MER5B DNA MER1_type 1 120 -58 2148 103 14 3 chr17 635813 636105 -84802375 - AluSc SINE Alu -14 295 1 329 287 66 12 chr17 636105 636166 -84802314 + MER5B DNA MER1_type 120 176 -2 2167 111 0 3 chr17 636976 637264 -84801216 - AluSx SINE Alu -25 287 1 1281 168 48 0 chr17 637304 637513 -84800967 - AluJo SINE Alu -92 220 2 1388 70 12 0 chr17 638066 638237 -84800243 + AluSg/x SINE Alu 135 307 -3 207 273 0 57 chr17 638914 639002 -84799478 + GA-rich Low_complexity Low_complexity 1 83 0 228 344 27 0 chr17 639621 639741 -84798739 - MER5A DNA MER1_type -5 173 47 276 257 122 68 chr17 641259 641415 -84797065 - L1ME4a LINE L1 -3 6118 5943 1850 156 0 14 chr17 641415 641710 -84796770 + AluJb SINE Alu 1 291 -21 276 257 122 68 chr17 641710 641790 -84796690 - L1ME4a LINE L1 -178 5943 5869 267 188 0 0 chr17 641855 641903 -84796577 + FAM SINE Alu 120 167 -12 309 336 73 0 chr17 642008 642118 -84796362 - L1ME4a LINE L1 -611 5510 5393 215 296 56 28 chr17 642264 642372 -84796108 - MIR SINE MIR -61 201 91 2048 81 102 18 chr17 643464 643748 -84794732 + AluSx SINE Alu 5 312 0 607 275 40 108 chr17 643939 644785 -84793695 + L1ME2 LINE L1 5268 5951 -213 1819 186 0 16 chr17 644850 645157 -84793323 + AluJo SINE Alu 1 302 -10 2297 118 3 0 chr17 645159 645464 -84793016 + AluSx SINE Alu 1 306 -6 252 349 84 19 chr17 646496 646711 -84791769 - L1ME3 LINE L1 -6 6156 5928 1046 208 42 17 chr17 646826 647062 -84791418 - L1ME3 LINE L1 -449 5713 5472 1891 163 11 3 chr17 647072 647355 -84791125 - AluJo SINE Alu -27 285 1 1894 237 43 124 chr17 647371 647537 -84790943 - L1ME3 LINE L1 -1002 5144 4966 3583 139 42 6 chr17 647537 648026 -84790454 - L1MB7 LINE L1 -19 6165 5646 2292 114 3 13 chr17 648026 648341 -84790139 - AluSx SINE Alu 0 312 1 3583 139 42 6 chr17 648341 648490 -84789990 - L1MB7 LINE L1 -538 5646 5504 1894 237 43 124 chr17 648490 648828 -84789652 - L1ME3 LINE L1 -1180 4966 4602 318 26 0 0 chr17 648828 648867 -84789613 + (CA)n Simple_repeat Simple_repeat 1 39 0 1894 237 43 124 chr17 648867 648983 -84789497 - L1ME3 LINE L1 -1544 4602 4478 244 191 0 0 chr17 648983 649025 -84789455 - MER57A LTR ERV1 -67 336 295 1894 237 43 124 chr17 649025 649204 -84789276 - L1ME3 LINE L1 -1668 4478 4286 1243 152 108 50 chr17 649204 649481 -84788999 + AluJo SINE Alu 1 293 -19 1894 237 43 124 chr17 649481 649578 -84788902 - L1ME3 LINE L1 -1860 4286 4183 2149 101 13 44 chr17 649578 649896 -84788584 - AluSg SINE Alu -2 308 1 1894 237 43 124 chr17 649896 650143 -84788337 - L1ME3 LINE L1 -1963 4183 4052 1184 194 53 30 chr17 650949 651212 -84787268 - AluJb SINE Alu -17 295 27 * 1274 102 17 11 chr17 651210 651386 -84787094 - AluSg/x SINE Alu -2 310 134 2485 72 13 3 chr17 651386 651691 -84786789 - AluSq SINE Alu -5 308 1 1986 117 53 17 chr17 651702 652002 -84786478 - AluSx SINE Alu -1 311 1 244 283 168 0 chr17 652010 652123 -84786357 + L2 LINE L2 3182 3313 0 872 189 44 0 chr17 652693 652852 -84785628 - AluJo SINE Alu -146 166 1 198 387 108 35 chr17 652856 653280 -84785200 + L2 LINE L2 2814 3268 -4 2330 105 0 0 chr17 653287 653583 -84784897 - AluSx SINE Alu -16 296 1 1978 167 0 0 chr17 654079 654378 -84784102 + AluJo SINE Alu 1 299 -13 1140 199 83 15 chr17 656167 656433 -84782047 + L1MC1 LINE L1 6049 6332 -1 354 258 164 25 chr17 657118 657277 -84781203 + L1MC5 LINE L1 7744 7924 -37 305 240 221 0 chr17 658088 658192 -84780288 - MIR3 SINE MIR -4 204 78 690 162 0 0 chr17 659006 659117 -84779363 + AluJb SINE Alu 147 257 -55 223 328 74 33 chr17 659236 659358 -84779122 - MIR SINE MIR -59 203 77 1894 138 12 66 chr17 659629 659948 -84778532 - AluJo SINE Alu -10 302 1 230 244 0 0 chr17 660849 660894 -84777586 - L2 LINE L2 -7 3306 3262 195 289 0 0 chr17 661360 661405 -84777075 - L2 LINE L2 -7 3306 3262 191 250 0 0 chr17 661409 661445 -84777035 - L2 LINE L2 -16 3297 3262 238 290 67 104 chr17 661562 661755 -84776725 - MIR SINE MIR -10 252 67 516 303 97 21 chr17 661765 662003 -84776477 + MIR SINE MIR 7 262 0 1957 114 10 3 chr17 662139 662437 -84776043 + AluSx SINE Alu 1 300 -12 209 333 33 0 chr17 663153 663213 -84775267 + MIR SINE MIR 37 98 -110 307 77 0 0 chr17 663219 663258 -84775222 + (GGAA)n Simple_repeat Simple_repeat 2 40 0 875 91 0 57 chr17 663258 663502 -84774978 + (GGGA)n Simple_repeat Simple_repeat 1 230 0 312 165 0 26 chr17 663789 663854 -84774626 + Alu SINE Alu 1 53 -250 227 240 0 0 chr17 663864 663914 -84774566 + MIR SINE MIR 91 140 -122 491 198 0 0 chr17 663968 664049 -84774431 - AluJb SINE Alu -64 248 168 357 275 181 7 chr17 664053 664202 -84774278 + MIR SINE MIR 87 261 -1 1639 169 0 4 chr17 664241 664513 -84773967 + AluJo SINE Alu 1 271 -41 180 336 126 17 chr17 665135 665254 -84773226 - L2 LINE L2 -43 3229 3098 4120 191 65 37 chr17 665320 665773 -84772707 + L1MB7 LINE L1 4660 5099 -1085 423 0 0 0 chr17 665773 665820 -84772660 + (CA)n Simple_repeat Simple_repeat 1 47 0 4120 191 65 37 chr17 665820 666314 -84772166 + L1MB7 LINE L1 5099 5578 -606 2308 85 0 7 chr17 666314 666620 -84771860 - AluSx SINE Alu -8 304 1 4120 191 65 37 chr17 666620 667082 -84771398 + L1MB7 LINE L1 5578 6116 -68 1467 170 83 4 chr17 667082 667359 -84771121 - AluSx SINE Alu -13 299 1 4120 191 65 37 chr17 667359 667409 -84771071 + L1MB7 LINE L1 6116 6163 -21 199 336 65 42 chr17 667427 667644 -84770836 - L2 LINE L2 -244 3028 2807 341 292 119 40 chr17 669498 669724 -84768756 - MIR SINE MIR -6 256 13 1168 192 18 39 chr17 669800 670029 -84768451 - MER58A DNA MER1_type 0 224 1 1565 187 3 3 chr17 670728 671028 -84767452 + AluJo SINE Alu 1 300 -12 479 222 296 15 chr17 672966 673018 -84765462 - MIR SINE MIR 0 262 226 2129 98 24 0 chr17 673018 673313 -84765167 - AluSq SINE Alu -11 302 1 479 222 296 15 chr17 673313 673463 -84765017 - MIR SINE MIR -36 226 3 362 282 32 16 chr17 673603 673727 -84764753 - L2 LINE L2 -15 3298 3173 1942 100 3 65 chr17 673855 674164 -84764316 - AluSq SINE Alu -21 292 3 332 248 149 12 chr17 674199 674360 -84764120 + L1ME4a LINE L1 5533 5715 -406 308 273 45 18 chr17 674365 674475 -84764005 - L2 LINE L2 0 3313 3201 500 290 98 59 chr17 674500 674755 -84763725 + L2 LINE L2 2702 2966 -348 341 49 0 0 chr17 674841 674882 -84763598 - AluSg SINE Alu -201 99 59 1393 82 0 16 chr17 674884 675078 -84763402 - AluSx SINE Alu -121 191 1 951 222 40 48 chr17 675078 675429 -84763051 + L1MC5 LINE L1 7161 7508 -453 1373 159 41 44 chr17 675440 675735 -84762745 + AluJo SINE Alu 1 294 -18 659 152 67 42 chr17 675779 675944 -84762536 + L1MC3 LINE L1 7617 7785 0 631 174 144 0 chr17 675974 676106 -84762374 + MSTD LTR MaLR 3 153 -243 512 275 69 72 chr17 676108 676413 -84762067 - L2 LINE L2 -1 3312 3009 1088 94 0 13 chr17 676443 676592 -84761888 - AluSq/x SINE Alu -161 151 5 960 223 83 55 chr17 676597 676924 -84761556 - MLT1C LTR MaLR -126 341 6 885 208 35 10 chr17 676933 677135 -84761345 - L1MC5 LINE L1 -1095 6866 6660 1951 158 0 0 chr17 677299 677603 -84760877 - AluJo SINE Alu -8 304 1 1364 92 0 0 chr17 677629 677802 -84760678 + AluY SINE Alu 1 173 -138 2037 103 0 3 chr17 677802 678092 -84760388 + AluY SINE Alu 8 296 -15 1853 119 0 41 chr17 678147 678462 -84760018 + AluSg SINE Alu 1 303 0 242 267 44 0 chr17 678643 678733 -84759747 + L1ME4a LINE L1 5955 6048 -73 399 302 114 0 chr17 680729 680878 -84757602 + LTR33 LTR ERVL 356 521 0 357 298 66 50 chr17 680878 681059 -84757421 + L1ME4a LINE L1 5846 6029 -92 1641 128 0 8 chr17 681064 681337 -84757143 - AluSx SINE Alu 0 309 39 205 227 303 0 chr17 682508 682574 -84755906 - MIR SINE MIR -73 135 50 694 309 35 43 chr17 682647 682726 -84755754 - MIR SINE MIR -1 261 183 2089 111 6 16 chr17 682726 683041 -84755439 - AluSx SINE Alu 0 312 1 694 309 35 43 chr17 683041 683217 -84755263 - MIR SINE MIR -79 183 8 1112 82 0 0 chr17 683411 683557 -84754923 + AluSq/x SINE Alu 1 146 -166 1887 104 3 68 chr17 683557 683702 -84754778 + AluSx SINE Alu 1 115 -197 2178 89 13 13 chr17 683702 684005 -84754475 + AluY SINE Alu 1 303 -8 1887 104 3 68 chr17 684005 684185 -84754295 + AluSx SINE Alu 115 305 -7 2285 96 0 3 chr17 684563 684877 -84753603 + AluSp SINE Alu 1 313 0 2714 10 0 3 chr17 685365 685674 -84752806 + AluYa5 SINE Alu 1 308 -3 393 264 42 35 chr17 685682 685826 -84752654 - MER117 DNA MER1_type -34 163 19 2113 98 3 19 chr17 686173 686488 -84751992 - AluSg SINE Alu 0 310 1 1103 151 0 0 chr17 686944 687110 -84751370 - AluJb SINE Alu -12 300 135 1104 194 0 9 chr17 687114 687330 -84751150 + AluJo SINE Alu 67 280 -32 267 31 0 0 chr17 687332 687364 -84751116 + (GGGGA)n Simple_repeat Simple_repeat 5 36 0 1728 157 33 17 chr17 687690 687990 -84750490 - AluJb SINE Alu -7 305 1 2693 166 80 219 chr17 688144 689080 -84749400 + L1MC4 LINE L1 6461 7526 -516 1935 114 59 7 chr17 689080 689370 -84749110 + AluSx SINE Alu 1 305 -7 2693 166 80 219 chr17 689370 689528 -84748952 + L1MC4 LINE L1 7526 7275 -767 2116 108 3 19 chr17 689528 689842 -84748638 + AluSq SINE Alu 1 309 -4 2693 166 80 219 chr17 689842 690312 -84748168 + L1MC4 LINE L1 7274 7808 -234 753 165 49 18 chr17 690311 690475 -84748005 + L1MC4 LINE L1 7732 7900 -142 * 1133 160 37 0 chr17 690480 690668 -84747812 + AluJb SINE Alu 1 195 -117 291 93 0 0 chr17 690668 690711 -84747769 + (GGGGA)n Simple_repeat Simple_repeat 1 43 0 221 190 52 0 chr17 690711 690769 -84747711 + A-rich Low_complexity Low_complexity 5 65 0 467 203 0 3 chr17 690807 690902 -84747578 + L1MC4 LINE L1 7889 8040 -2 321 26 0 0 chr17 690912 690950 -84747530 + (TCTCCC)n Simple_repeat Simple_repeat 6 43 0 10368 29 8 106 chr17 690954 692486 -84745994 + SVA Other Other 2 1383 -3 200 241 148 111 chr17 693033 693249 -84745231 - MIR SINE MIR -37 225 2 1757 172 7 0 chr17 693926 694229 -84744251 + AluJb SINE Alu 1 305 -7 1491 172 39 26 chr17 703961 704269 -84734211 - AluJb SINE Alu 0 312 1 2576 183 170 58 chr17 704275 704818 -84733662 + L1MC4a LINE L1 6940 7578 -230 1470 169 55 0 chr17 704818 705091 -84733389 + AluJo SINE Alu 1 288 -24 2576 183 170 58 chr17 705091 705350 -84733130 + L1MC4a LINE L1 7578 7807 -1 286 267 61 30 chr17 706181 706312 -84732168 - MIR SINE MIR -51 211 77 1864 163 0 0 chr17 706506 706806 -84731674 - AluSx SINE Alu -12 300 1 227 195 0 0 chr17 706900 706941 -84731539 + (CAGA)n Simple_repeat Simple_repeat 1 41 0 776 208 0 91 chr17 707277 707480 -84731000 - L1MA10 LINE L1 -1 6333 6152 2009 114 3 7 chr17 707480 707791 -84730689 + AluSg SINE Alu 2 310 0 776 208 0 91 chr17 707791 707818 -84730662 - L1MA10 LINE L1 -182 6152 6124 25 0 0 0 chr17 707893 707918 -84730562 + AT_rich Low_complexity Low_complexity 1 25 0 25 83 0 0 chr17 708484 708544 -84729936 + AT_rich Low_complexity Low_complexity 1 60 0 712 258 117 11 chr17 708782 709065 -84729415 + L1MC4 LINE L1 7730 8042 0 287 247 65 0 chr17 709072 709149 -84729331 + HsTC2 DNA Tc2 1271 1352 -546 8802 26 0 1 chr17 709162 710181 -84728299 - L1P LINE L1 -1336 4810 3793 671 166 37 18 chr17 910181 910344 -84528136 + L1MB3 LINE L1 5976 6141 -42 2271 82 0 0 chr17 910345 910639 -84527841 + AluSx SINE Alu 1 294 -18 775 157 0 0 chr17 910672 910793 -84527687 - FRAM SINE Alu -14 162 42 789 174 8 8 chr17 910846 910978 -84527502 + FLAM_C SINE Alu 2 133 -10 2167 100 0 7 chr17 910984 911284 -84527196 + AluSg SINE Alu 3 300 -10 1241 159 4 41 chr17 911548 911818 -84526662 - AluSq SINE Alu -53 260 1 1679 164 20 7 chr17 912032 912337 -84526143 - AluJo SINE Alu -3 309 1 657 158 0 0 chr17 912500 912601 -84525879 + AluJ/FLAM SINE Alu 2 102 -210 809 131 0 8 chr17 912805 912935 -84525545 + AluSp/q SINE Alu 168 296 -17 954 150 131 77 chr17 912935 913077 -84525403 - AluJo SINE Alu -20 292 159 2059 115 0 10 chr17 913077 913390 -84525090 - AluSg SINE Alu 0 310 1 954 150 131 77 chr17 913390 913507 -84524973 - AluJo SINE Alu -153 159 19 339 252 36 29 chr17 913640 913779 -84524701 - L1M4 LINE L1 -985 5161 5022 895 97 15 15 chr17 913779 913913 -84524567 + AluSq/x SINE Alu 1 134 -179 1988 99 3 66 chr17 913965 914298 -84524182 - AluSx SINE Alu 0 312 1 232 301 54 0 chr17 914397 914490 -84523990 + L1MC4a LINE L1 6080 6177 -1631 486 154 240 29 chr17 914520 914624 -84523856 + AluJb SINE Alu 2 127 -185 2032 108 0 7 chr17 914751 915048 -84523432 - AluSx SINE Alu -17 295 1 932 67 7 22 chr17 915051 915186 -84523294 - AluSq/x SINE Alu -180 133 1 372 281 221 15 chr17 915193 915524 -84522956 + L2 LINE L2 1693 2091 -1223 2155 80 0 13 chr17 915585 915886 -84522594 - AluSc SINE Alu -12 297 1 783 176 5 93 chr17 915985 916136 -84522344 + AluJb SINE Alu 137 269 -43 2277 68 7 3 chr17 916136 916444 -84522036 + AluY SINE Alu 1 309 -2 783 176 5 93 chr17 916444 916485 -84521995 + AluJb SINE Alu 269 312 0 496 291 104 33 chr17 916699 917004 -84521476 + L2 LINE L2 2736 3061 -211 2234 88 3 3 chr17 917068 917374 -84521106 - AluSg SINE Alu -4 306 1 398 286 24 52 chr17 917580 917790 -84520690 - L2 LINE L2 -211 3061 2858 2353 67 3 0 chr17 918119 918417 -84520063 + AluSx SINE Alu 1 299 -13 296 292 18 44 chr17 918422 918535 -84519945 + L2 LINE L2 3163 3272 0 2128 105 0 7 chr17 918646 918951 -84519529 - AluY SINE Alu -8 303 1 715 183 0 30 chr17 919238 919369 -84519111 - FLAM_C SINE Alu -15 128 2 259 318 67 72 chr17 919463 919658 -84518822 + L2 LINE L2 3001 3194 -78 1070 136 28 0 chr17 919662 919839 -84518641 - AluSg/x SINE Alu 0 310 129 1996 116 0 7 chr17 919844 920160 -84518320 - AluSx SINE Alu 0 314 1 241 95 71 0 chr17 920372 920414 -84518066 + L2 LINE L2 3264 3308 -5 2178 100 6 3 chr17 920491 920802 -84517678 - AluSq SINE Alu -1 312 1 235 270 50 0 chr17 920810 920910 -84517570 - L1P LINE L1 -781 5370 5266 442 179 0 13 chr17 921069 921147 -84517333 - FLAM SINE Alu -17 126 50 1758 159 37 7 chr17 921212 921507 -84516973 + AluJb SINE Alu 1 304 -8 248 268 0 18 chr17 921522 921578 -84516902 + AluSg/x SINE Alu 124 178 -122 327 167 95 36 chr17 921647 921731 -84516749 - L1MA9 LINE L1 0 6312 6224 2136 105 39 60 chr17 921879 922098 -84516382 - THE1C LTR MaLR -2 373 164 1912 137 0 19 chr17 922098 922413 -84516067 + AluSx SINE Alu 3 311 -1 2136 105 39 60 chr17 922413 922574 -84515906 - THE1C LTR MaLR -211 164 1 2080 113 0 0 chr17 922669 922961 -84515519 - AluSx SINE Alu -20 292 1 699 281 186 30 chr17 922984 923382 -84515098 - MLT1K LTR MaLR -10 578 119 791 271 42 42 chr17 923528 923603 -84514877 - L1M4 LINE L1 -1440 4706 4632 2186 63 0 78 chr17 923603 923937 -84514543 - AluY SINE Alu -3 308 1 791 271 42 42 chr17 923937 924238 -84514242 - L1M4 LINE L1 -1513 4633 4330 1124 107 0 34 chr17 924261 924438 -84514042 + AluSq SINE Alu 1 171 -142 892 239 83 73 chr17 924618 924777 -84513703 - HAL1 LINE L1 -5 2502 2346 1726 131 0 64 chr17 924777 925091 -84513389 - AluSx SINE Alu -18 294 1 2002 117 0 13 chr17 925091 925389 -84513091 - AluSx SINE Alu -18 294 1 892 239 83 73 chr17 925389 925500 -84512980 - HAL1 LINE L1 -161 2346 2238 1946 127 3 7 chr17 925500 925808 -84512672 - AluSp SINE Alu -6 307 1 892 239 83 73 chr17 925808 926054 -84512426 - HAL1 LINE L1 -269 2238 1979 1419 269 56 87 chr17 926432 926503 -84511977 + L1MC4 LINE L1 6875 6947 -1095 1553 165 3 32 chr17 926503 926812 -84511668 + AluJo SINE Alu 1 300 -12 1419 269 56 87 chr17 926812 926965 -84511515 + L1MC4 LINE L1 6947 7103 -939 2025 125 0 3 chr17 926965 927262 -84511218 + AluSx SINE Alu 1 296 -16 1419 269 56 87 chr17 927262 927676 -84510804 + L1MC4 LINE L1 7103 7529 -513 2152 106 0 0 chr17 927676 927979 -84510501 - AluSx SINE Alu -9 303 1 1419 269 56 87 chr17 927979 928106 -84510374 + L1MC4 LINE L1 7529 7658 -384 1400 143 68 34 chr17 928106 928399 -84510081 + AluJo SINE Alu 1 303 -9 1419 269 56 87 chr17 928399 928708 -84509772 + L1MC4 LINE L1 7658 7918 -124 311 224 247 52 chr17 928708 928882 -84509598 + LTR50 LTR ERVL 1 208 -587 856 170 78 61 chr17 928897 928991 -84509489 + L1M4 LINE L1 4934 5025 -1121 2185 60 23 10 chr17 928991 929290 -84509190 - AluY SINE Alu -8 303 1 856 170 78 61 chr17 929290 929425 -84509055 + L1M4 LINE L1 5025 5167 -979 1651 116 27 37 chr17 929426 929720 -84508760 + AluJb SINE Alu 1 291 -21 906 68 0 23 chr17 929728 929861 -84508619 + AluSq/x SINE Alu 1 130 -182 2230 97 7 0 chr17 929988 930297 -84508183 + AluY SINE Alu 1 311 0 2247 74 3 7 chr17 930313 930623 -84507857 + AluY SINE Alu 1 309 -2 432 0 0 0 chr17 930954 931002 -84507478 + (TA)n Simple_repeat Simple_repeat 2 49 0 387 133 0 112 chr17 931004 931102 -84507378 - LTR9 LTR ERV1 -90 522 436 2114 74 10 10 chr17 931102 931399 -84507081 - AluY SINE Alu -14 297 1 477 240 4 28 chr17 931407 931546 -84506934 + L1MD2 LINE L1 6235 7983 -12 1593 168 13 35 chr17 931861 932036 -84506444 - AluJo SINE Alu -9 303 137 2110 93 0 60 chr17 932036 932369 -84506111 - AluSp SINE Alu 0 313 1 1593 168 13 35 chr17 932369 932503 -84505977 - AluJo SINE Alu -175 137 1 246 32 0 0 chr17 932506 932537 -84505943 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 641 188 0 0 chr17 932551 932652 -84505828 - AluJ/FLAM SINE Alu -210 102 2 289 113 31 216 chr17 932654 932751 -84505729 - AluJo SINE Alu -159 143 65 854 107 0 0 chr17 932766 932888 -84505592 + AluSg/x SINE Alu 176 297 -15 406 93 0 0 chr17 932889 932943 -84505537 + Alu SINE Alu 2 55 -256 1897 97 3 58 chr17 934230 934540 -84503940 - AluY SINE Alu -18 293 1 2262 50 0 31 chr17 934594 934915 -84503565 + AluY SINE Alu 1 311 0 1832 140 0 37 chr17 934930 935251 -84503229 + AluSx SINE Alu 1 309 -3 351 267 168 31 chr17 935668 935829 -84502651 + MLT1K LTR MaLR 315 497 -91 795 163 0 8 chr17 935837 935966 -84502514 - FLAM_C SINE Alu -5 128 1 1384 171 36 26 chr17 937537 937841 -84500639 + AluJo SINE Alu 1 307 -5 1919 101 14 20 chr17 937927 938224 -84500256 + AluY SINE Alu 1 295 -16 1892 119 10 13 chr17 938578 938880 -84499600 + AluSx SINE Alu 1 301 -11 2252 97 0 3 chr17 938959 939270 -84499210 + AluSx SINE Alu 1 310 -2 1743 112 4 14 chr17 940004 940280 -84498200 - AluSg SINE Alu -7 303 31 1903 42 36 46 chr17 940341 940647 -84497833 + AluY SINE Alu 2 304 -7 377 210 49 0 chr17 941117 941198 -84497282 + L1ME LINE L1 5529 5613 -508 1011 139 0 18 chr17 941251 941416 -84497064 + FRAM SINE Alu 1 162 -4 2231 57 10 14 chr17 941557 941853 -84496627 - AluY SINE Alu -16 295 1 1629 151 21 0 chr17 941881 942172 -84496308 + AluSg SINE Alu 1 297 -13 423 227 62 39 chr17 942303 942431 -84496049 - L1MB7 LINE L1 -10 6174 6044 1362 172 50 17 chr17 942440 942737 -84495743 - AluJb SINE Alu -5 307 1 243 259 82 12 chr17 942851 942936 -84495544 - MLT1H LTR MaLR -50 499 409 973 230 65 21 chr17 942968 943259 -84495221 - MLT1H LTR MaLR -245 304 1 1166 114 12 0 chr17 943354 943520 -84494960 - AluSq SINE Alu -19 294 127 831 112 0 0 chr17 943521 943646 -84494834 + (TA)n Simple_repeat Simple_repeat 1 125 0 2265 78 0 34 chr17 943646 943968 -84494512 - AluY SINE Alu 0 311 1 288 293 99 26 chr17 944297 944488 -84493992 - L1M4 LINE L1 -1466 4680 4476 294 352 7 7 chr17 944492 944634 -84493846 - L1M4 LINE L1 -2313 3833 3692 483 91 0 0 chr17 944749 944815 -84493665 - FLAM SINE Alu -32 111 46 208 62 0 31 chr17 944815 944847 -84493633 + (TCTG)n Simple_repeat Simple_repeat 1 31 0 276 77 0 0 chr17 944873 944912 -84493568 + (TCTA)n Simple_repeat Simple_repeat 1 39 0 307 167 0 0 chr17 944913 944961 -84493519 - AluS SINE Alu -26 274 227 357 62 0 0 chr17 944961 945009 -84493471 + (TCTA)n Simple_repeat Simple_repeat 1 48 0 1821 117 0 18 chr17 945010 945291 -84493189 - AluSx SINE Alu -36 276 1 225 0 0 0 chr17 945297 945322 -84493158 + (T)n Simple_repeat Simple_repeat 1 25 0 388 231 51 8 chr17 945415 945532 -84492948 - L1ME4a LINE L1 -45 6076 5955 1751 140 3 29 chr17 945690 945997 -84492483 - AluJo SINE Alu -12 300 2 2079 94 0 17 chr17 946006 946303 -84492177 - AluSc SINE Alu -17 292 1 2268 93 0 0 chr17 947299 947600 -84490880 + AluSx SINE Alu 1 301 -11 1393 139 154 23 chr17 947719 947985 -84490495 - AluJb SINE Alu -1 301 1 845 128 0 47 chr17 948063 948198 -84490282 + FLAM_C SINE Alu 1 130 -182 1928 144 10 7 chr17 948198 948504 -84489976 + AluSx SINE Alu 1 307 -5 845 128 0 47 chr17 948504 948517 -84489963 + FLAM_C SINE Alu 130 142 -170 2206 56 42 7 chr17 948575 948862 -84489618 + AluY SINE Alu 1 297 -14 259 282 24 12 chr17 948877 948962 -84489518 - MIR SINE MIR -80 182 97 1003 106 0 59 chr17 949076 949246 -84489234 - AluSc SINE Alu -148 161 2 2217 79 0 13 chr17 950816 951120 -84487360 - AluY SINE Alu -11 300 1 180 0 0 0 chr17 951206 951226 -84487254 + (A)n Simple_repeat Simple_repeat 1 20 0 232 156 0 0 chr17 951376 951421 -84487059 + Alu SINE Alu 256 300 0 711 262 59 0 chr17 951434 951621 -84486859 + MIR SINE MIR 65 262 0 1703 166 13 10 chr17 951640 951947 -84486533 + AluJo SINE Alu 5 312 0 1809 81 37 7 chr17 952304 952604 -84485876 + AluSg SINE Alu 1 308 0 1926 98 13 36 chr17 952940 953245 -84485235 - AluSq SINE Alu -15 298 1 1919 114 21 7 chr17 953333 953623 -84484857 - AluSc SINE Alu -15 294 1 1903 117 21 24 chr17 953630 953920 -84484560 - AluSx SINE Alu -23 289 1 312 225 42 108 chr17 954180 954300 -84484180 + MIR SINE MIR 15 126 -136 402 276 68 44 chr17 954446 954583 -84483897 + L1ME LINE L1 5307 5452 -669 1538 140 51 27 chr17 954583 954875 -84483605 + AluSx SINE Alu 1 299 -13 402 276 68 44 chr17 954875 954918 -84483562 + L1ME LINE L1 5452 5492 -629 1910 135 0 10 chr17 954981 955277 -84483203 + AluSx SINE Alu 1 293 -19 29 0 0 0 chr17 955277 955306 -84483174 + AT_rich Low_complexity Low_complexity 1 29 0 2022 45 0 11 chr17 955377 955641 -84482839 - AluY SINE Alu -12 299 39 1475 253 54 83 chr17 955660 956354 -84482126 + L1MC4a LINE L1 5011 5724 -430 2122 105 3 0 chr17 956354 956650 -84481830 - AluSx SINE Alu -15 297 1 1475 253 54 83 chr17 956650 956790 -84481690 + L1MC4a LINE L1 5724 5343 -811 1609 111 0 137 chr17 956790 957132 -84481348 - AluSx SINE Alu -7 295 1 1475 253 54 83 chr17 957132 957239 -84481241 + L1MC4a LINE L1 5342 5451 -703 1375 274 116 18 chr17 957411 958030 -84480450 + L1ME4a LINE L1 5445 6120 -1 788 154 15 8 chr17 958518 958648 -84479832 - FLAM_C SINE Alu -11 132 2 2378 52 0 7 chr17 958827 959148 -84479332 - AluSg SINE Alu 0 319 1 2195 61 29 0 chr17 959156 959436 -84479044 - AluY SINE Alu -23 288 1 909 116 0 0 chr17 959449 959570 -84478910 - FLAM_C SINE Alu -12 121 1 1028 137 25 6 chr17 959794 959955 -84478525 + AluSx SINE Alu 61 224 -88 1137 151 16 68 chr17 959955 960032 -84478448 - AluJo SINE Alu -73 239 160 4678 138 44 5 chr17 960032 960788 -84477692 + LTR1 LTR ERV1 1 785 0 1137 151 16 68 chr17 960788 960962 -84477518 - AluJo SINE Alu -152 160 1 1994 142 0 0 chr17 961124 961426 -84477054 + AluSx SINE Alu 1 302 -10 1372 144 0 25 chr17 961781 962017 -84476463 - AluJb SINE Alu -24 288 59 2138 111 7 3 chr17 962024 962331 -84476149 - AluSx SINE Alu -4 308 1 2036 128 0 0 chr17 962429 962725 -84475755 - AluSx SINE Alu -16 296 1 413 141 99 91 chr17 962842 962913 -84475567 + L1MC4 LINE L1 7921 7995 -47 1698 141 24 14 chr17 962913 963203 -84475277 - AluSx SINE Alu -19 293 1 413 141 99 91 chr17 963203 963252 -84475228 + L1MC4 LINE L1 7995 8042 0 382 219 109 17 chr17 963391 963510 -84474970 + L1M4 LINE L1 2784 2913 -3233 2194 101 0 13 chr17 963741 964057 -84474423 - AluSx SINE Alu 0 312 1 841 123 8 0 chr17 964060 964190 -84474290 - AluSq/x SINE Alu -182 131 1 1907 123 24 7 chr17 966280 966572 -84471908 + AluSq SINE Alu 1 297 -16 2327 93 0 3 chr17 967215 967526 -84470954 - AluSx SINE Alu -2 310 1 1284 157 31 100 chr17 967526 967690 -84470790 - AluSq SINE Alu -5 298 165 225 0 0 0 chr17 967690 967715 -84470765 + (TTTTA)n Simple_repeat Simple_repeat 3 27 0 1284 157 31 100 chr17 967715 967869 -84470611 - AluSq SINE Alu -138 165 2 1206 127 0 64 chr17 968039 968322 -84470158 - AluSq SINE Alu -11 302 38 194 318 14 99 chr17 968688 968911 -84469569 + L2 LINE L2 2858 3061 -211 539 303 134 70 chr17 969753 970284 -84468196 + L2 LINE L2 1616 2230 -1084 1702 103 0 26 chr17 970284 970557 -84467923 - AluSx SINE Alu -46 266 1 539 303 134 70 chr17 970557 970933 -84467547 + L2 LINE L2 2230 2581 -733 2327 70 0 3 chr17 971097 971395 -84467085 - AluY SINE Alu -14 297 1 1780 104 0 83 chr17 971395 971732 -84466748 - AluSx SINE Alu -3 309 1 2182 107 0 0 chr17 971888 972188 -84466292 - AluSx SINE Alu -12 300 1 532 273 116 12 chr17 972193 972365 -84466115 + MIR SINE MIR 71 260 -2 22 0 0 0 chr17 972402 972424 -84466056 + AT_rich Low_complexity Low_complexity 1 22 0 1808 119 0 14 chr17 972425 972731 -84465749 - AluSg SINE Alu 0 302 1 399 232 8 72 chr17 972741 972866 -84465614 + L2 LINE L2 3197 3313 0 1955 124 24 7 chr17 973079 973377 -84465103 + AluSp SINE Alu 1 303 -10 1930 122 14 0 chr17 973408 973702 -84464778 + AluSx SINE Alu 1 298 -14 916 137 0 0 chr17 973734 973865 -84464615 - FLAM_C SINE Alu -2 131 1 331 212 111 12 chr17 974227 974318 -84464162 - MIR SINE MIR -20 188 89 1533 163 46 14 chr17 974383 974666 -84463814 - AluSx SINE Alu -20 292 1 1375 166 3 62 chr17 974670 974978 -84463502 - AluJo SINE Alu -22 290 1 2165 104 24 6 chr17 974978 975315 -84463165 - HSMAR2 DNA Mariner -958 344 2 669 172 0 33 chr17 975362 975484 -84462996 + FLAM_C SINE Alu 1 118 -15 1765 129 22 7 chr17 975632 975933 -84462547 - AluSx SINE Alu 0 305 1 2373 201 50 56 chr17 975934 976191 -84462289 - L1ME2 LINE L1 -34 6130 5873 1462 163 13 60 chr17 976191 976365 -84462115 - AluJo SINE Alu -18 294 138 2172 91 0 7 chr17 976365 976663 -84461817 - AluSc SINE Alu -13 296 1 1462 163 13 60 chr17 976663 976788 -84461692 - AluJo SINE Alu -174 138 9 2373 201 50 56 chr17 976788 977538 -84460942 - L1ME2 LINE L1 -291 5873 5120 2191 93 6 3 chr17 977538 977850 -84460630 + AluSq SINE Alu 1 313 0 2203 94 3 0 chr17 977856 978155 -84460325 + AluSp SINE Alu 5 304 -9 2373 201 50 56 chr17 978155 978372 -84460108 - L1ME2 LINE L1 -1049 5115 4865 2191 72 0 35 chr17 978372 978691 -84459789 - AluY SINE Alu -3 308 1 2373 201 50 56 chr17 978691 978858 -84459622 - L1ME2 LINE L1 -1299 4865 4699 1204 141 9 18 chr17 978881 979108 -84459372 - AluSx SINE Alu -29 283 59 257 274 61 61 chr17 979163 979408 -84459072 - L1ME2 LINE L1 -1958 4188 3944 464 139 0 0 chr17 979890 979962 -84458518 + AluS SINE Alu 2 73 -239 1982 96 13 20 chr17 979976 980278 -84458202 - AluY SINE Alu -11 300 1 460 283 75 0 chr17 980278 980437 -84458043 - L1M4 LINE L1 -1270 4876 4706 2136 117 3 0 chr17 980439 980748 -84457732 - AluSx SINE Alu -2 310 1 756 164 14 29 chr17 980758 980898 -84457582 - FRAM SINE Alu -15 161 24 1681 153 11 0 chr17 980911 981186 -84457294 - AluJb SINE Alu -3 309 32 1507 171 21 7 chr17 981260 981422 -84457058 - AluJo SINE Alu -13 299 130 2027 107 0 0 chr17 981422 981703 -84456777 - AluY SINE Alu -22 289 9 1507 171 21 7 chr17 981703 981826 -84456654 - AluJo SINE Alu -182 130 10 2032 213 95 131 chr17 981838 981909 -84456571 - L1M4 LINE L1 -1679 4467 4395 1984 121 13 10 chr17 981909 982216 -84456264 + AluSx SINE Alu 1 308 -4 2032 213 95 131 chr17 982216 982426 -84456054 - L1M4 LINE L1 -1751 4395 4179 1988 119 20 3 chr17 982426 982729 -84455751 - AluSx SINE Alu -4 308 1 2032 213 95 131 chr17 982729 983165 -84455315 - L1M4 LINE L1 -1967 4179 3682 715 141 16 25 chr17 983165 983286 -84455194 - FLAM_C SINE Alu -15 128 9 2032 213 95 131 chr17 983286 983642 -84454838 - L1M4 LINE L1 -2464 3682 3315 203 313 167 0 chr17 984391 984487 -84453993 - MER5A DNA MER1_type -1 188 77 213 303 107 73 chr17 984532 984747 -84453733 + L2 LINE L2 3021 3246 -26 405 0 0 0 chr17 984747 984792 -84453688 + (TTA)n Simple_repeat Simple_repeat 2 46 0 213 303 107 73 chr17 984792 984810 -84453670 + L2 LINE L2 3246 3262 -10 820 133 0 30 chr17 986114 986249 -84452231 - AluSq/x SINE Alu -181 132 2 351 0 0 0 chr17 986324 986363 -84452117 + (TG)n Simple_repeat Simple_repeat 2 40 0 1355 190 3 33 chr17 986426 986731 -84451749 + AluJo SINE Alu 9 304 -8 1094 135 0 16 chr17 986873 987058 -84451422 + AluSq SINE Alu 54 235 -78 1440 191 3 24 chr17 987164 987462 -84451018 + AluJo SINE Alu 13 304 -8 1531 198 0 6 chr17 987550 987863 -84450617 + AluJb SINE Alu 1 311 -1 643 175 175 35 chr17 987977 988205 -84450275 - HAL1b LINE L1 -702 646 387 1805 105 16 35 chr17 988215 988530 -84449950 - AluY SINE Alu -2 309 1 1834 95 46 18 chr17 989659 989943 -84448537 + AluSg SINE Alu 1 292 -18 856 231 64 8 chr17 989953 990187 -84448293 + L1MB7 LINE L1 5937 6183 -1 1920 90 4 11 chr17 990252 990519 -84447961 + AluSx SINE Alu 1 265 -47 1817 118 0 8 chr17 990527 990789 -84447691 - AluSg1 SINE Alu -49 260 1 1341 221 47 9 chr17 990791 991108 -84447372 - L1M4 LINE L1 -362 5822 5494 2525 49 0 0 chr17 991212 991518 -84446962 - AluY SINE Alu -4 307 2 400 326 144 26 chr17 991519 991789 -84446691 - L1M4 LINE L1 -1955 4191 3890 2251 102 0 0 chr17 991817 992112 -84446368 + AluSx SINE Alu 1 295 -17 1898 114 3 23 chr17 992178 992477 -84446003 + AluSx SINE Alu 1 293 -19 2068 104 14 0 chr17 992552 992839 -84445641 + AluSx SINE Alu 11 301 -11 1347 197 71 94 chr17 992863 993471 -84445009 - L1MC5 LINE L1 -30 7931 7338 451 246 143 29 chr17 993474 993649 -84444831 - L1M4 LINE L1 -2364 3782 3588 280 314 133 54 chr17 994077 994519 -84443961 - L2 LINE L2 -10 3303 2827 1923 129 0 10 chr17 995348 995643 -84442837 + AluSx SINE Alu 7 298 -14 181 264 0 38 chr17 995904 995957 -84442523 + L2 LINE L2 3222 3272 0 1264 189 4 15 chr17 996381 996641 -84441839 + AluJo SINE Alu 16 272 -40 395 337 51 10 chr17 996661 996857 -84441623 + L1M4 LINE L1 5189 5392 -754 2244 233 33 75 chr17 996874 997125 -84441355 - L1MEc LINE L1 -2056 4159 3899 1654 115 39 0 chr17 997125 997285 -84441195 - AluSx SINE Alu -19 293 118 300 27 0 0 chr17 997285 997322 -84441158 + (TG)n Simple_repeat Simple_repeat 2 38 0 1654 115 39 0 chr17 997322 997421 -84441059 - AluSx SINE Alu -194 118 24 2244 233 33 75 chr17 997421 997930 -84440550 - L1MEc LINE L1 -2316 3899 3431 1322 161 106 25 chr17 997997 998271 -84440209 + AluJb SINE Alu 1 296 -16 1856 120 0 20 chr17 998271 998570 -84439910 + AluSg SINE Alu 1 294 -16 28 111 0 0 chr17 998576 998657 -84439823 + AT_rich Low_complexity Low_complexity 1 81 0 826 107 0 9 chr17 998657 998769 -84439711 - AluSq/x SINE Alu -179 133 23 1258 202 86 5 chr17 998836 999207 -84439273 - L1MEc LINE L1 -2907 3308 2908 234 91 0 0 chr17 999208 999241 -84439239 + (T)n Simple_repeat Simple_repeat 1 33 0 2009 124 0 13 chr17 1000432 1000730 -84437750 - AluSx SINE Alu -13 299 6 1904 209 54 14 chr17 1000732 1000834 -84437646 - L1MEc LINE L1 -3287 2928 2832 1919 136 0 3 chr17 1000834 1001176 -84437304 - AluSx SINE Alu 0 341 1 1904 209 54 14 chr17 1001176 1001588 -84436892 - L1MEc LINE L1 -3383 2832 2392 1363 177 0 61 chr17 1001589 1001773 -84436707 - AluJb SINE Alu -1 311 117 180 97 0 0 chr17 1001773 1001804 -84436676 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2027 89 4 4 chr17 1001804 1002075 -84436405 - AluSc SINE Alu -28 281 11 1363 177 0 61 chr17 1002075 1002199 -84436281 - AluJb SINE Alu -193 119 21 834 147 61 25 chr17 1002257 1002420 -84436060 - AluJo SINE Alu -142 170 2 2507 271 46 21 chr17 1002420 1003268 -84435212 - L1MEc LINE L1 -5241 1155 287 565 296 8 46 chr17 1003458 1003698 -84434782 - HAL1 LINE L1 -25 2482 2252 1595 132 26 58 chr17 1003711 1003877 -84434603 - AluJo SINE Alu -11 301 148 2081 80 30 13 chr17 1003877 1004179 -84434301 - AluY SINE Alu -4 307 1 1595 132 26 58 chr17 1004179 1004323 -84434157 - AluJo SINE Alu -164 148 1 1913 132 4 0 chr17 1004401 1004707 -84433773 - AluSx SINE Alu 0 307 1 2237 73 16 7 chr17 1004707 1005009 -84433471 - AluSq SINE Alu -7 306 1 1396 183 20 40 chr17 1005013 1005176 -84433304 - AluJb SINE Alu -10 302 137 387 0 0 0 chr17 1005176 1005219 -84433261 + (TTTTA)n Simple_repeat Simple_repeat 2 44 0 2162 77 3 3 chr17 1005219 1005504 -84432976 - AluSx SINE Alu -27 285 1 1396 183 20 40 chr17 1005504 1005639 -84432841 - AluJb SINE Alu -173 139 9 2134 105 0 10 chr17 1006248 1006552 -84431928 + AluSq SINE Alu 2 302 -11 1752 87 4 16 chr17 1006665 1006918 -84431562 + AluSx SINE Alu 55 304 -8 279 203 101 29 chr17 1006918 1006987 -84431493 + AluSc SINE Alu 132 205 -94 242 281 104 67 chr17 1007101 1007236 -84431244 - MIR3 SINE MIR -9 199 60 343 266 60 54 chr17 1007601 1007785 -84430695 - L1MC4a LINE L1 -1748 6060 5876 822 191 0 0 chr17 1007808 1007934 -84430546 - FLAM_C SINE Alu -16 127 2 1693 168 0 13 chr17 1007960 1008263 -84430217 + AluJb SINE Alu 1 299 -13 1989 112 6 22 chr17 1008314 1008626 -84429854 - AluSx SINE Alu -5 307 1 850 122 0 41 chr17 1008627 1008774 -84429706 - AluSq/x SINE Alu -172 141 1 183 42 0 0 chr17 1009347 1009371 -84429109 + (TG)n Simple_repeat Simple_repeat 2 25 0 1679 178 0 19 chr17 1009439 1009754 -84428726 + AluJo SINE Alu 1 309 -3 1252 191 10 54 chr17 1009818 1010132 -84428348 + AluJb SINE Alu 3 302 0 1530 118 118 19 chr17 1010519 1010790 -84427690 + AluSg SINE Alu 1 298 -12 2084 86 0 20 chr17 1011291 1011594 -84426886 + AluSq SINE Alu 1 297 -16 502 316 62 29 chr17 1012059 1012303 -84426177 + MIR SINE MIR 11 262 0 1235 172 28 16 chr17 1012497 1012747 -84425733 - L1MB3 LINE L1 -7 6176 5924 1384 170 147 8 chr17 1014787 1015052 -84423428 - AluJo SINE Alu 0 302 1 2173 119 0 13 chr17 1015785 1016095 -84422385 + AluSx SINE Alu 1 306 -6 329 0 0 24 chr17 1016095 1016137 -84422343 + (TA)n Simple_repeat Simple_repeat 2 42 0 248 0 0 30 chr17 1016136 1016169 -84422311 + (CA)n Simple_repeat Simple_repeat 2 33 0 * 1710 149 13 30 chr17 1016328 1016629 -84421851 + AluJo SINE Alu 1 296 -16 21 0 0 0 chr17 1016738 1016759 -84421721 + AT_rich Low_complexity Low_complexity 1 21 0 2102 120 0 10 chr17 1018405 1018713 -84419767 + AluSx SINE Alu 1 305 -7 1939 126 0 23 chr17 1020087 1020389 -84418091 + AluSx SINE Alu 2 296 -16 1783 132 16 46 chr17 1024567 1024870 -84413610 + AluSx SINE Alu 1 294 -18 217 267 0 67 chr17 1025397 1025472 -84413008 - MIR SINE MIR -79 129 60 1357 95 11 0 chr17 1026176 1026365 -84412115 - AluSg/x SINE Alu -18 294 104 2108 71 0 14 chr17 1026365 1026646 -84411834 - AluSg SINE Alu -33 277 1 344 93 0 0 chr17 1026652 1026706 -84411774 - Alu SINE Alu -7 294 241 227 351 0 0 chr17 1026713 1026790 -84411690 + L2 LINE L2 3232 3308 -5 1967 85 50 7 chr17 1026940 1027222 -84411258 + AluSx SINE Alu 2 295 -17 327 250 179 18 chr17 1027234 1027600 -84410880 + L2 LINE L2 2765 3191 -122 474 266 112 115 chr17 1029557 1029843 -84408637 + L2 LINE L2 2985 3269 -3 2185 105 3 10 chr17 1029848 1030162 -84408318 - AluSx SINE Alu 0 312 1 1492 174 60 11 chr17 1030162 1030444 -84408036 - AluJb SINE Alu -15 297 2 2141 108 0 13 chr17 1031214 1031520 -84406960 + AluSq SINE Alu 1 302 -11 201 313 30 0 chr17 1031586 1031653 -84406827 + MIR SINE MIR 70 138 -70 2122 80 0 21 chr17 1031793 1032103 -84406377 - AluY SINE Alu 0 304 1 2127 105 0 13 chr17 1032103 1032408 -84406072 - AluSq SINE Alu -12 301 1 2169 90 3 39 chr17 1032991 1033132 -84405348 + AluSx SINE Alu 1 145 -167 2045 81 3 14 chr17 1033132 1033439 -84405041 + AluSc SINE Alu 1 304 0 2169 90 3 39 chr17 1033439 1033606 -84404874 + AluSx SINE Alu 145 299 -13 567 120 0 22 chr17 1033882 1033974 -84404506 + AluS SINE Alu 1 90 -222 1123 112 0 0 chr17 1033974 1034135 -84404345 - AluSg/x SINE Alu -18 294 134 1721 152 3 23 chr17 1034135 1034438 -84404042 - AluSg SINE Alu -13 297 1 307 350 105 35 chr17 1034445 1034645 -84403835 + L2 LINE L2 3099 3312 -1 2201 56 3 30 chr17 1035268 1035573 -84402907 - AluY SINE Alu -14 297 1 181 288 136 15 chr17 1035576 1035642 -84402838 - MER5A DNA MER1_type -115 74 1 2242 96 3 3 chr17 1037101 1037404 -84401076 - AluSp SINE Alu -10 303 1 2240 78 3 13 chr17 1038291 1038597 -84399883 - AluSp SINE Alu -10 303 1 258 258 176 0 chr17 1039497 1039638 -84398842 - MIR SINE MIR -75 187 13 212 214 5 88 chr17 1039977 1040169 -84398311 + CT-rich Low_complexity Low_complexity 3 178 0 230 263 0 59 chr17 1040247 1040399 -84398081 + CT-rich Low_complexity Low_complexity 4 146 0 227 226 11 74 chr17 1040477 1040667 -84397813 + CT-rich Low_complexity Low_complexity 3 180 0 224 195 0 103 chr17 1040832 1041027 -84397453 + CT-rich Low_complexity Low_complexity 3 177 0 985 81 0 29 chr17 1041183 1041319 -84397161 + FLAM_C SINE Alu 1 132 -1 694 289 56 5 chr17 1042797 1042994 -84395486 - MIR SINE MIR -28 234 28 2240 84 0 7 chr17 1044530 1044826 -84393654 - AluY SINE Alu -17 294 1 604 104 208 19 chr17 1044828 1044934 -84393546 - AluSg SINE Alu -179 131 6 2282 98 0 0 chr17 1045176 1045482 -84392998 - AluSg SINE Alu -4 306 1 330 309 81 7 chr17 1045506 1045642 -84392838 - MIR SINE MIR -110 152 7 328 217 29 0 chr17 1046559 1046628 -84391852 + MIR SINE MIR 76 146 -62 324 346 22 15 chr17 1046628 1046764 -84391716 - L2 LINE L2 0 3313 3177 2208 100 0 16 chr17 1047737 1048047 -84390433 - AluSx SINE Alu -6 306 2 1840 109 0 84 chr17 1048059 1048380 -84390100 - AluSg SINE Alu -16 294 1 900 91 0 8 chr17 1048390 1048511 -84389969 - FLAM_C SINE Alu -21 122 3 389 235 198 43 chr17 1048515 1048677 -84389803 - MIR3 SINE MIR -10 198 12 276 344 81 63 chr17 1049933 1050000 -84388480 + L2 LINE L2 2835 2899 -414 1985 108 0 91 chr17 1050000 1050341 -84388139 - AluSg SINE Alu 0 310 1 276 344 81 63 chr17 1050341 1050525 -84387955 + L2 LINE L2 2899 3078 -235 2321 86 0 3 chr17 1050525 1050826 -84387654 - AluSx SINE Alu -12 300 1 276 344 81 63 chr17 1050826 1051018 -84387462 + L2 LINE L2 3078 3287 -26 2393 66 3 0 chr17 1051047 1051352 -84387128 - AluY SINE Alu -5 306 1 186 43 0 0 chr17 1051587 1051610 -84386870 + (TCC)n Simple_repeat Simple_repeat 2 24 0 248 238 24 24 chr17 1055191 1055275 -84383205 + G-rich Low_complexity Low_complexity 3 86 0 328 282 48 19 chr17 1056042 1056145 -84382335 - L1MC4 LINE L1 -478 7564 7459 1732 107 0 8 chr17 1056145 1056388 -84382092 + AluSx SINE Alu 1 241 -71 226 280 16 80 chr17 1056445 1056570 -84381910 - MIR SINE MIR -40 222 106 2268 86 7 0 chr17 1056675 1057071 -84381409 + AluY SINE Alu 1 311 0 2274 99 0 10 chr17 1057470 1057783 -84380697 + AluSg SINE Alu 1 310 0 2192 97 7 7 chr17 1057819 1058129 -84380351 + AluSx SINE Alu 1 310 -2 227 302 52 10 chr17 1058234 1058330 -84380150 - MIR SINE MIR -4 258 159 2403 61 3 0 chr17 1058331 1058624 -84379856 - AluSp SINE Alu -19 294 1 1791 161 3 10 chr17 1058627 1058925 -84379555 - AluJb SINE Alu -13 299 4 900 156 12 24 chr17 1058930 1059097 -84379383 - AluJo/FRAM SINE Alu -1 301 137 1312 115 0 11 chr17 1059100 1059291 -84379189 - AluSp SINE Alu -19 294 106 2071 84 40 17 chr17 1059690 1059987 -84378493 - AluSx SINE Alu -8 304 1 255 333 20 10 chr17 1060000 1060099 -84378381 - MER5A DNA MER1_type -83 106 7 1547 154 110 4 chr17 1060496 1060769 -84377711 - AluSx SINE Alu -10 302 1 866 121 15 23 chr17 1060779 1060911 -84377569 - FLAM_C SINE Alu -2 131 1 2219 63 0 22 chr17 1060914 1061230 -84377250 - AluY SINE Alu 0 311 3 21 36 0 0 chr17 1061234 1061262 -84377218 + AT_rich Low_complexity Low_complexity 1 28 0 204 275 87 72 chr17 1061343 1061387 -84377093 - MIR SINE MIR -177 85 38 942 216 22 57 chr17 1061387 1061614 -84376866 + MER20 DNA MER1_type 1 219 0 204 275 87 72 chr17 1061614 1061638 -84376842 - MIR SINE MIR -224 38 16 2305 77 0 13 chr17 1062089 1062402 -84376078 + AluSx SINE Alu 1 309 -3 23 92 0 0 chr17 1064650 1064715 -84373765 + GC_rich Low_complexity Low_complexity 1 65 0 224 269 44 19 chr17 1066011 1066171 -84372309 + A-rich Low_complexity Low_complexity 4 167 0 555 176 29 0 chr17 1066218 1066320 -84372160 + AluSg/x SINE Alu 187 291 -18 1332 183 32 32 chr17 1066694 1066820 -84371660 + AluJo SINE Alu 1 126 -186 2198 70 10 30 chr17 1066820 1067119 -84371361 - AluSq SINE Alu -20 293 1 1332 183 32 32 chr17 1067119 1067276 -84371204 + AluJo SINE Alu 125 284 -28 38 0 0 0 chr17 1067276 1067314 -84371166 + AT_rich Low_complexity Low_complexity 1 38 0 516 153 82 0 chr17 1068414 1068512 -84369968 + FLAM_A SINE Alu 22 127 -15 4579 141 44 31 chr17 1068512 1069144 -84369336 - Tigger1 DNA MER2_type -194 2224 1576 1483 147 124 15 chr17 1069144 1069409 -84369071 - AluJb SINE Alu -18 294 1 4579 141 44 31 chr17 1069409 1069665 -84368815 - Tigger1 DNA MER2_type -842 1576 1325 338 95 16 79 chr17 1069665 1069728 -84368752 - Tigger1 DNA MER2_type -1035 1383 1325 3573 127 11 21 chr17 1069767 1070383 -84368097 - Tigger1 DNA MER2_type -1012 1406 797 577 91 0 0 chr17 1070387 1070464 -84368016 - AluJo SINE Alu -10 302 226 1050 157 56 6 chr17 1070464 1070642 -84367838 - AluJo SINE Alu -125 187 1 1136 101 22 6 chr17 1070642 1070820 -84367660 - Tigger1 DNA MER2_type -1614 804 624 1556 165 38 70 chr17 1070820 1070961 -84367519 - Tigger1 DNA MER2_type -2060 358 214 2330 87 0 13 chr17 1070961 1071260 -84367220 + AluSc SINE Alu 1 295 -14 1556 165 38 70 chr17 1071260 1071289 -84367191 - Tigger1 DNA MER2_type -2204 214 186 1983 125 0 27 chr17 1071289 1071585 -84366895 + AluSx SINE Alu 1 288 -24 1556 165 38 70 chr17 1071585 1071783 -84366697 - Tigger1 DNA MER2_type -2232 186 1 411 200 0 67 chr17 1071783 1071872 -84366608 + MER58B DNA MER1_type 259 341 0 1652 203 0 20 chr17 1073029 1073335 -84365145 - AluJb SINE Alu -12 300 1 195 42 0 0 chr17 1073342 1073366 -84365114 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2490 82 0 3 chr17 1073413 1073718 -84364762 + AluSq SINE Alu 1 304 -9 250 232 0 18 chr17 1073727 1073783 -84364697 + L1MB7 LINE L1 5559 5613 -508 1913 158 21 0 chr17 1073785 1074076 -84364404 + AluJb SINE Alu 1 297 -15 2263 93 0 13 chr17 1074078 1074379 -84364101 + AluY SINE Alu 1 297 -14 2051 94 0 11 chr17 1075159 1075434 -84363046 - AluSx SINE Alu -40 272 1 2170 99 7 3 chr17 1075726 1076010 -84362470 - AluSq SINE Alu -17 296 12 1561 202 0 38 chr17 1077584 1077901 -84360579 - AluJo SINE Alu -7 305 1 1934 146 14 7 chr17 1077907 1078201 -84360279 - AluSx SINE Alu -16 296 1 612 187 15 8 chr17 1078236 1078370 -84360110 - L1MB3 LINE L1 -1 6182 6048 354 264 0 0 chr17 1078370 1078457 -84360023 + L1MB7 LINE L1 5938 6024 -160 311 213 85 53 chr17 1078464 1078558 -84359922 - L1MB3 LINE L1 -147 6036 5940 275 143 111 0 chr17 1078969 1079032 -84359448 - MIR SINE MIR -102 160 91 217 132 0 0 chr17 1079065 1079103 -84359377 + (T)n Simple_repeat Simple_repeat 1 38 0 518 140 190 10 chr17 1079216 1079316 -84359164 + FLAM_A SINE Alu 1 118 -15 2200 75 14 11 chr17 1079401 1079723 -84358757 - AluSx SINE Alu 0 323 1 542 257 56 76 chr17 1079734 1079983 -84358497 - MIR SINE MIR -4 258 15 333 303 49 16 chr17 1080465 1080587 -84357893 + MIR3 SINE MIR 76 201 -7 2329 68 11 4 chr17 1083937 1084243 -84354237 - AluSg SINE Alu 0 308 1 2060 124 3 7 chr17 1084291 1084581 -84353899 + AluJo SINE Alu 1 289 -23 2251 119 0 3 chr17 1084595 1084897 -84353583 + AluSx SINE Alu 5 305 -7 2116 78 0 119 chr17 1084946 1085290 -84353190 - AluSc SINE Alu -6 303 1 1881 140 14 7 chr17 1085429 1085721 -84352759 + AluSx SINE Alu 1 294 -18 959 98 98 20 chr17 1086337 1086490 -84351990 - AluSg/x SINE Alu -19 291 127 2196 92 7 3 chr17 1086499 1086804 -84351676 - AluY SINE Alu 0 306 1 2257 87 37 7 chr17 1086816 1087114 -84351366 - AluSp SINE Alu -6 307 1 2359 94 0 19 chr17 1087491 1087809 -84350671 - AluSx SINE Alu 0 312 1 2550 43 7 10 chr17 1090067 1090372 -84348108 + AluSp SINE Alu 1 304 -9 2340 88 7 19 chr17 1094514 1094822 -84343658 - AluSq SINE Alu -6 307 4 2413 103 3 0 chr17 1094874 1095184 -84343296 + AluSx SINE Alu 1 311 -1 192 356 33 22 chr17 1095923 1096013 -84342467 + MIR SINE MIR 124 214 -48 283 356 7 34 chr17 1096245 1096391 -84342089 + L3 LINE CR1 1296 1437 -140 2325 89 0 13 chr17 1096738 1097051 -84341429 + AluSx SINE Alu 1 309 -3 604 231 62 59 chr17 1097176 1097477 -84341003 + MLT1C LTR MaLR 5 316 -151 1012 172 22 43 chr17 1097477 1097709 -84340771 + AluJb SINE Alu 86 312 0 744 176 13 13 chr17 1097709 1097862 -84340618 + MLT1C LTR MaLR 306 458 -9 399 21 0 0 chr17 1098156 1098204 -84340276 + (CA)n Simple_repeat Simple_repeat 1 48 0 2473 54 0 16 chr17 1098269 1098583 -84339897 + AluY SINE Alu 1 309 -2 2078 114 3 23 chr17 1099382 1099689 -84338791 - AluSg SINE Alu -9 301 1 202 278 0 28 chr17 1102277 1102349 -84336131 + CT-rich Low_complexity Low_complexity 2 71 0 1878 141 7 23 chr17 1103816 1104121 -84334359 + AluSx SINE Alu 1 300 -12 2294 96 0 13 chr17 1104477 1104780 -84333700 - AluSx SINE Alu -13 299 1 693 163 0 0 chr17 1105378 1105501 -84332979 + FLAM_A SINE Alu 4 126 -7 22 0 0 0 chr17 1105501 1105523 -84332957 + AT_rich Low_complexity Low_complexity 1 22 0 2166 92 0 11 chr17 1105536 1105820 -84332660 + AluSx SINE Alu 1 281 -31 2302 79 7 0 chr17 1105826 1106133 -84332347 + AluY SINE Alu 1 309 0 279 323 76 76 chr17 1156359 1156660 -84281820 - L2 LINE L2 -64 3208 2905 2314 102 0 0 chr17 1156660 1156963 -84281517 + AluSx SINE Alu 1 303 -9 279 323 76 76 chr17 1156963 1157057 -84281423 - L2 LINE L2 -366 2906 2813 2343 97 0 0 chr17 1158209 1158519 -84279961 + AluSx SINE Alu 1 310 -2 335 254 120 14 chr17 1158524 1158666 -84279814 - MIR3 SINE MIR -41 167 11 264 59 0 0 chr17 1159789 1159823 -84278657 + (CA)n Simple_repeat Simple_repeat 2 35 0 370 343 36 36 chr17 1160709 1160957 -84277523 + MIR SINE MIR 1 248 -14 2304 79 3 3 chr17 1163658 1163961 -84274519 - AluSx SINE Alu -9 303 1 1667 160 26 36 chr17 1163961 1164138 -84274342 - AluJb SINE Alu -9 303 129 2106 127 0 3 chr17 1164138 1164429 -84274051 + AluSx SINE Alu 1 290 -22 1667 160 26 36 chr17 1164429 1164557 -84273923 - AluJb SINE Alu -183 129 1 213 217 0 28 chr17 1165770 1165836 -84272644 + C-rich Low_complexity Low_complexity 1 64 0 23 33 0 0 chr17 1166500 1166530 -84271950 + GC_rich Low_complexity Low_complexity 1 30 0 231 236 0 0 chr17 1167427 1167499 -84270981 + CT-rich Low_complexity Low_complexity 3 74 0 437 330 157 22 chr17 1168320 1168587 -84269893 - L2 LINE L2 -6 3307 3005 2449 56 0 0 chr17 1168640 1168942 -84269538 + AluSg SINE Alu 1 302 -8 2166 99 26 0 chr17 1168948 1169250 -84269230 + AluSx SINE Alu 1 310 -2 239 298 96 0 chr17 1169449 1169543 -84268937 - L2 LINE L2 -217 3055 2953 757 140 0 66 chr17 1169608 1169744 -84268736 + FLAM_C SINE Alu 14 140 -3 264 274 36 24 chr17 1169932 1170016 -84268464 - MIR SINE MIR -76 132 48 1728 144 26 49 chr17 1171408 1171713 -84266767 + AluJo SINE Alu 1 298 -14 251 254 17 0 chr17 1172674 1172733 -84265747 - L2 LINE L2 -5 3267 3208 216 288 0 0 chr17 1173085 1173144 -84265336 + L2 LINE L2 3255 3313 0 1382 186 16 52 chr17 1173218 1173358 -84265122 + AluJo SINE Alu 1 144 -168 2374 74 0 16 chr17 1173358 1173667 -84264813 + AluSx SINE Alu 1 304 -8 1382 186 16 52 chr17 1173667 1173833 -84264647 + AluJo SINE Alu 144 296 -16 188 263 50 50 chr17 1173918 1174017 -84264463 + L2 LINE L2 3093 3191 -81 592 205 37 74 chr17 1174646 1174812 -84263668 - LTR39 LTR ERV1 0 783 623 2149 77 40 3 chr17 1174812 1175110 -84263370 - AluY SINE Alu -2 309 1 592 205 37 74 chr17 1175110 1175133 -84263347 - LTR39 LTR ERV1 -160 623 601 1088 174 59 41 chr17 1175261 1175531 -84262949 - LTR39 LTR ERV1 -508 275 1 273 57 0 135 chr17 1176524 1176665 -84261815 + (CCCCCT)n Simple_repeat Simple_repeat 2 123 0 536 110 0 94 chr17 1176679 1176870 -84261610 + (CCCCCT)n Simple_repeat Simple_repeat 2 174 0 216 217 0 33 chr17 1176882 1176942 -84261538 + C-rich Low_complexity Low_complexity 3 60 0 218 281 0 0 chr17 1179262 1179319 -84259161 - MIR SINE MIR -111 97 41 541 327 28 28 chr17 1180004 1180221 -84258259 + MIR SINE MIR 43 259 -3 1571 168 23 52 chr17 1180221 1180530 -84257950 + AluJb SINE Alu 1 300 -12 1687 181 87 0 chr17 1180628 1180938 -84257542 + MER1B DNA MER1_type 1 337 0 467 243 44 29 chr17 1181123 1181259 -84257221 - MIR3 SINE MIR -32 176 39 2287 85 0 0 chr17 1181259 1181553 -84256927 - AluY SINE Alu -16 295 2 2606 43 0 0 chr17 1181565 1181870 -84256610 - AluY SINE Alu -6 305 1 183 309 149 75 chr17 1183031 1183219 -84255261 - L2 LINE L2 -29 3284 3083 335 308 157 0 chr17 1183464 1183623 -84254857 + MIR SINE MIR 17 200 -62 25 0 0 0 chr17 1183787 1183812 -84254668 + GC_rich Low_complexity Low_complexity 1 25 0 1730 160 17 10 chr17 1186211 1186505 -84251975 - AluJb SINE Alu -11 301 6 1624 174 26 16 chr17 1186522 1186826 -84251654 - AluJb SINE Alu -5 307 1 326 245 47 9 chr17 1187360 1187466 -84251014 + Charlie8 DNA MER1_type 91 200 -2217 2156 110 10 0 chr17 1187857 1188157 -84250323 + AluSp SINE Alu 1 303 -10 1208 97 0 0 chr17 1188158 1188312 -84250168 + AluSg/x SINE Alu 135 288 -24 312 275 101 9 chr17 1188321 1188430 -84250050 + MER5A DNA MER1_type 71 189 0 2107 134 0 0 chr17 1188605 1188910 -84249570 - AluSx SINE Alu -7 305 1 2038 143 0 3 chr17 1188985 1189292 -84249188 + AluJo SINE Alu 1 306 -6 1228 140 0 0 chr17 1189293 1189471 -84249009 + AluSg/x SINE Alu 124 301 -9 207 130 74 0 chr17 1189472 1189526 -84248954 + (TA)n Simple_repeat Simple_repeat 1 58 0 1232 162 5 5 chr17 1189580 1189796 -84248684 - AluSg/x SINE Alu -12 300 85 1213 161 71 36 chr17 1189797 1190077 -84248403 - AluJo SINE Alu -22 290 1 1691 149 0 70 chr17 1190088 1190404 -84248076 - AluJb SINE Alu -18 294 1 21 0 0 0 chr17 1190810 1190831 -84247649 + GC_rich Low_complexity Low_complexity 1 21 0 251 294 69 10 chr17 1193042 1193144 -84245336 + MIR SINE MIR 112 219 -43 26 64 0 0 chr17 1193278 1193325 -84245155 + AT_rich Low_complexity Low_complexity 1 47 0 479 111 49 0 chr17 1193358 1193439 -84245041 - AluY SINE Alu -27 284 200 23 0 0 0 chr17 1193663 1193686 -84244794 + GC_rich Low_complexity Low_complexity 1 23 0 31 76 0 0 chr17 1195015 1195081 -84243399 + GC_rich Low_complexity Low_complexity 1 66 0 28 48 0 0 chr17 1195865 1195907 -84242573 + GC_rich Low_complexity Low_complexity 1 42 0 200 292 0 31 chr17 1196627 1196723 -84241757 + C-rich Low_complexity Low_complexity 3 95 0 27 62 0 0 chr17 1197041 1197089 -84241391 + GC_rich Low_complexity Low_complexity 1 48 0 1873 181 0 3 chr17 1199809 1200113 -84238367 + AluJb SINE Alu 6 308 -4 23 0 0 0 chr17 1200256 1200279 -84238201 + AT_rich Low_complexity Low_complexity 1 23 0 212 109 0 22 chr17 1200296 1200342 -84238138 + (TAGG)n Simple_repeat Simple_repeat 4 48 0 2123 100 13 3 chr17 1200362 1200661 -84237819 - AluSq SINE Alu -11 302 1 517 143 22 22 chr17 1200661 1200752 -84237728 - AluSg/x SINE Alu -7 302 212 454 346 64 40 chr17 1201215 1201486 -84236994 + L1MC4a LINE L1 5656 5838 -283 2576 39 3 3 chr17 1201487 1201797 -84236683 + AluYb8 SINE Alu 1 310 -8 429 218 58 11 chr17 1201811 1201985 -84236495 + L1MB7 LINE L1 4378 4559 -1587 315 254 10 62 chr17 1202043 1202195 -84236285 + L1MB7 LINE L1 4976 5093 -1053 1801 78 12 4 chr17 1202277 1202522 -84235958 + AluSg SINE Alu 44 290 -20 537 161 102 8 chr17 1202742 1202860 -84235620 - MER5A DNA MER1_type -33 156 28 283 182 0 0 chr17 1202887 1202900 -84235580 + MER3 DNA MER1_type 36 48 -161 674 210 114 0 chr17 1202900 1203067 -84235413 - MER3 DNA MER1_type -1 208 23 266 272 201 65 chr17 1203130 1203303 -84235177 + L3 LINE CR1 1188 1336 -241 1718 169 10 14 chr17 1203303 1203598 -84234882 - AluJo SINE Alu -18 294 1 266 272 201 65 chr17 1203598 1203762 -84234718 + L3 LINE CR1 1336 1571 -6 574 189 66 41 chr17 1203886 1204008 -84234472 - FLAM_A SINE Alu -6 136 12 588 166 134 16 chr17 1204031 1204218 -84234262 + L1MB7 LINE L1 5083 5291 -855 859 104 17 0 chr17 1204218 1204333 -84234147 + FLAM_C SINE Alu 1 117 -16 201 39 0 0 chr17 1204376 1204402 -84234078 + (TCTA)n Simple_repeat Simple_repeat 4 29 0 3889 150 36 31 chr17 1204402 1204457 -84234023 + L1MB7 LINE L1 5275 5328 -856 2444 64 0 13 chr17 1204457 1204768 -84233712 + AluSp SINE Alu 1 307 -6 3889 150 36 31 chr17 1204768 1205617 -84232863 + L1MB7 LINE L1 5328 6184 0 387 163 12 25 chr17 1205710 1205790 -84232690 - L1MA10 LINE L1 0 6334 6256 1193 202 4 16 chr17 1205798 1205905 -84232575 - AluJb SINE Alu -67 245 138 2248 92 0 25 chr17 1205905 1206222 -84232258 - AluSq SINE Alu -4 309 1 1193 202 4 16 chr17 1206222 1206362 -84232118 - AluJb SINE Alu -174 138 1 628 301 8 25 chr17 1206432 1206668 -84231812 - L1MEd LINE L1 -5424 695 464 396 313 57 83 chr17 1206689 1206957 -84231523 - L1MEd LINE L1 -5776 343 85 1510 147 41 57 chr17 1206957 1207271 -84231209 - AluSx SINE Alu -3 309 1 396 313 57 83 chr17 1207271 1207353 -84231127 - L1MEd LINE L1 -6034 85 2 253 108 0 0 chr17 1207392 1207429 -84231051 + Alu SINE Alu 5 41 -261 577 118 11 0 chr17 1207429 1207522 -84230958 + AluSg/x SINE Alu 215 308 -4 1613 155 13 79 chr17 1208404 1208721 -84229759 - AluSx SINE Alu -16 296 1 335 226 9 70 chr17 1208749 1208864 -84229616 - MIR SINE MIR -50 212 105 2180 93 0 0 chr17 1208976 1209255 -84229225 + AluSx SINE Alu 11 289 -23 743 203 0 0 chr17 1209314 1209437 -84229043 + FLAM_A SINE Alu 4 126 -7 3687 141 32 71 chr17 1209531 1209766 -84228714 + L1MB3 LINE L1 5374 5617 -566 1840 131 11 3 chr17 1209766 1210075 -84228405 + AluJb SINE Alu 1 311 0 3687 141 32 71 chr17 1210075 1210432 -84228048 + L1MB3 LINE L1 5617 5986 -197 1942 159 0 0 chr17 1210432 1210728 -84227752 + AluSx SINE Alu 1 296 -16 3687 141 32 71 chr17 1210728 1210923 -84227557 + L1MB3 LINE L1 5986 6131 -52 2302 101 0 0 chr17 1210923 1211230 -84227250 + AluSx SINE Alu 1 307 -5 3687 141 32 71 chr17 1211230 1211282 -84227198 + L1MB3 LINE L1 6131 6183 0 1950 155 9 40 chr17 1211878 1212226 -84226254 + MER1B DNA MER1_type 1 337 0 3272 202 67 23 chr17 1214250 1214938 -84223542 + L1ME1 LINE L1 5191 5931 -235 1131 90 229 5 chr17 1214938 1215126 -84223354 - MER30 DNA MER1_type 0 230 1 3272 202 67 23 chr17 1215126 1215352 -84223128 + L1ME1 LINE L1 5931 6146 -20 1567 172 46 4 chr17 1216622 1216883 -84221597 + AluJb SINE Alu 23 294 -18 2162 107 0 30 chr17 1216903 1217202 -84221278 - AluSx SINE Alu -15 297 8 25 0 0 0 chr17 1217886 1217911 -84220569 + AT_rich Low_complexity Low_complexity 1 25 0 2273 108 3 13 chr17 1217955 1218270 -84220210 + AluSq SINE Alu 1 312 -1 1955 156 7 3 chr17 1218491 1218792 -84219688 - AluJb SINE Alu -1 311 10 1283 164 5 0 chr17 1220483 1220684 -84217796 + AluJo SINE Alu 1 202 -110 2926 208 45 46 chr17 1220713 1220986 -84217494 + L1ME2 LINE L1 5152 5424 -740 2101 120 7 29 chr17 1220986 1221294 -84217186 + AluSx SINE Alu 1 301 -11 2926 208 45 46 chr17 1221294 1222024 -84216456 + L1ME2 LINE L1 5424 6148 -16 672 159 24 0 chr17 1222209 1222335 -84216145 + AluJb SINE Alu 2 130 -182 713 276 150 46 chr17 1222347 1222499 -84215981 - L1ME4a LINE L1 -6 6115 5980 234 0 0 0 chr17 1222499 1222525 -84215955 + (CA)n Simple_repeat Simple_repeat 2 27 0 713 276 150 46 chr17 1222525 1222579 -84215901 - L1ME4a LINE L1 -141 5980 5933 1832 190 3 0 chr17 1222579 1222889 -84215591 - AluJb SINE Alu -1 311 1 713 276 150 46 chr17 1222889 1223120 -84215360 - L1ME4a LINE L1 -188 5933 5631 1651 244 113 43 chr17 1223695 1224396 -84214084 + L2 LINE L2 2305 3067 -246 188 319 0 0 chr17 1224449 1224496 -84213984 - L2 LINE L2 -16 3256 3210 635 164 9 9 chr17 1224556 1224672 -84213808 - AluJ SINE Alu -16 296 181 633 91 20 20 chr17 1224675 1224774 -84213706 - AluSq SINE Alu -93 220 122 860 91 80 148 chr17 1224774 1224836 -84213644 - AluJ SINE Alu -137 175 110 2258 89 4 0 chr17 1224836 1225150 -84213330 + AluSg SINE Alu 1 315 0 860 91 80 148 chr17 1225150 1225262 -84213218 - AluJ SINE Alu -202 110 12 182 272 35 70 chr17 1225263 1225377 -84213103 - MIR SINE MIR -60 148 39 2090 114 37 23 chr17 1225405 1225704 -84212776 + AluSx SINE Alu 7 309 -3 1509 208 27 3 chr17 1225714 1226012 -84212468 + AluJo SINE Alu 1 305 -7 331 329 118 54 chr17 1226392 1226705 -84211775 - L1MEd LINE L1 -4922 1197 865 2176 105 3 25 chr17 1226724 1227038 -84211442 - AluSx SINE Alu -5 307 1 1641 215 0 3 chr17 1227122 1227415 -84211065 + AluJb SINE Alu 1 292 -20 2032 134 3 7 chr17 1227643 1227950 -84210530 - AluSx SINE Alu -6 306 1 1749 146 0 11 chr17 1227951 1228226 -84210254 - AluJo SINE Alu -6 306 35 586 138 107 16 chr17 1228277 1228436 -84210044 + MER46A DNA MER2_type 5 227 -9 474 218 9 36 chr17 1228814 1228924 -84209556 + MLT1D LTR MaLR 1 107 -398 2303 114 0 0 chr17 1228926 1229225 -84209255 - AluSx SINE Alu -13 299 1 1234 112 0 51 chr17 1229232 1229428 -84209052 - AluSg/x SINE Alu 0 312 127 2227 105 3 20 chr17 1229445 1229741 -84208739 - AluSq SINE Alu -18 295 5 1691 146 4 0 chr17 1229809 1230056 -84208424 - AluSx SINE Alu -21 291 44 612 271 38 55 chr17 1230104 1230396 -84208084 + L1M4 LINE L1 4076 4362 -1784 1814 165 28 3 chr17 1230401 1230692 -84207788 + AluJb SINE Alu 2 299 -13 1864 184 0 0 chr17 1230748 1231047 -84207433 + AluJo SINE Alu 1 299 -13 661 224 0 8 chr17 1231197 1231331 -84207149 - FLAM_A SINE Alu 0 133 1 2228 89 6 25 chr17 1231336 1231651 -84206829 - AluY SINE Alu -2 309 1 384 243 28 19 chr17 1231655 1231762 -84206718 - MIR SINE MIR -61 147 40 985 252 20 20 chr17 1233587 1233837 -84204643 - MIR SINE MIR -1 261 12 297 89 0 0 chr17 1235846 1235891 -84202589 + (CA)n Simple_repeat Simple_repeat 1 45 0 195 100 0 0 chr17 1235975 1236005 -84202475 + (GGGA)n Simple_repeat Simple_repeat 2 31 0 2138 130 10 0 chr17 1240618 1240925 -84197555 + AluSx SINE Alu 1 310 -2 2440 67 0 38 chr17 1242381 1242696 -84195784 - AluY SINE Alu -8 303 1 1981 89 4 8 chr17 1242698 1242957 -84195523 - AluSx SINE Alu -11 301 44 431 287 13 57 chr17 1243469 1243626 -84194854 + MIR SINE MIR 2 151 -111 2073 144 7 0 chr17 1243628 1243933 -84194547 + AluSx SINE Alu 1 307 -5 1052 174 14 55 chr17 1243933 1244152 -84194328 + AluJb SINE Alu 88 297 -15 191 317 17 0 chr17 1244156 1244216 -84194264 + MIR SINE MIR 190 250 -12 327 217 0 29 chr17 1244417 1244486 -84193994 - AluJ SINE Alu -39 263 197 737 154 46 23 chr17 1244491 1244621 -84193859 - AluJ SINE Alu -171 141 9 1926 139 42 3 chr17 1244965 1245253 -84193227 - AluSx SINE Alu -13 299 1 621 167 7 65 chr17 1245260 1245398 -84193082 - FLAM_C SINE Alu -12 131 2 239 202 85 53 chr17 1246177 1246271 -84192209 - L2 LINE L2 -3 3310 3214 1169 200 90 48 chr17 1246775 1246927 -84191553 - AluJo SINE Alu 0 302 158 2268 91 0 17 chr17 1246927 1247223 -84191257 - AluSx SINE Alu -21 291 1 1169 200 90 48 chr17 1247223 1247360 -84191120 - AluJo SINE Alu -144 158 1 187 147 44 103 chr17 1247411 1247471 -84191009 - L2 LINE L2 -9 3304 3247 252 0 0 0 chr17 1247471 1247499 -84190981 + (CAAGA)n Simple_repeat Simple_repeat 5 32 0 209 279 192 0 chr17 1247699 1247803 -84190677 - L3 LINE CR1 -22 1555 1432 1754 158 65 3 chr17 1247859 1248150 -84190330 - AluJb SINE Alu -3 309 1 509 258 151 82 chr17 1248228 1248694 -84189786 - L3 LINE CR1 -136 1441 932 1632 183 23 42 chr17 1248694 1249000 -84189480 - AluJb SINE Alu -12 300 1 509 258 151 82 chr17 1249000 1249071 -84189409 - L3 LINE CR1 -645 932 867 320 333 46 20 chr17 1249186 1249339 -84189141 - L3 LINE CR1 -720 857 701 2317 103 7 0 chr17 1249344 1249645 -84188835 - AluSq SINE Alu -10 303 1 219 254 0 17 chr17 1250526 1250585 -84187895 + MER5A DNA MER1_type 28 85 -104 1762 172 0 17 chr17 1250585 1250744 -84187736 - AluSx SINE Alu -20 292 139 1957 176 3 0 chr17 1250744 1251051 -84187429 - AluSx SINE Alu -4 308 1 1762 172 0 17 chr17 1251051 1251188 -84187292 - AluSx SINE Alu -173 139 1 1425 174 121 11 chr17 1251297 1251561 -84186919 - AluJb SINE Alu -19 293 1 649 150 0 0 chr17 1251565 1251665 -84186815 - AluJ/FLAM SINE Alu -211 101 2 2018 143 0 17 chr17 1251823 1252116 -84186364 - AluJo SINE Alu -24 288 1 640 283 59 0 chr17 1252381 1252568 -84185912 - MIR SINE MIR -4 258 61 2987 165 34 36 chr17 1252905 1253075 -84185405 - L1MA7 LINE L1 0 6291 6122 1790 155 3 48 chr17 1253075 1253384 -84185096 - AluJb SINE Alu -17 295 1 2987 165 34 36 chr17 1253384 1253881 -84184599 - L1MA7 LINE L1 -169 6122 5625 2454 80 0 0 chr17 1254665 1254964 -84183516 - AluY SINE Alu -12 299 1 1002 152 0 0 chr17 1254964 1255109 -84183371 - AluSq/x SINE Alu -168 145 1 238 294 327 20 chr17 1255420 1255573 -84182907 - MIR SINE MIR -62 200 1 826 178 20 13 chr17 1255639 1255791 -84182689 - AluJb SINE Alu -19 293 141 181 376 47 0 chr17 1256433 1256518 -84181962 + L3 LINE CR1 1485 1573 -4 666 197 0 0 chr17 1263638 1263785 -84174695 + (TG)n Simple_repeat Simple_repeat 1 147 0 369 0 0 0 chr17 1264045 1264086 -84174394 + (CA)n Simple_repeat Simple_repeat 2 42 0 205 250 0 0 chr17 1265053 1265097 -84173383 + G-rich Low_complexity Low_complexity 3 46 0 195 42 0 0 chr17 1266762 1266786 -84171694 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1435 143 0 5 chr17 1266791 1267014 -84171466 + AluJb SINE Alu 89 310 -2 256 244 25 50 chr17 1267200 1267319 -84171161 + MER113 DNA MER1_type? 5 120 -401 221 222 19 0 chr17 1270277 1270331 -84168149 + MIR SINE MIR 196 250 -12 2264 100 0 0 chr17 1270458 1270773 -84167707 - AluSx SINE Alu 0 316 2 216 0 0 0 chr17 1270777 1270801 -84167679 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2501 80 0 0 chr17 1270819 1271120 -84167360 + AluSg SINE Alu 1 301 -9 365 61 0 0 chr17 1271138 1271187 -84167293 + AluSq/x SINE Alu 87 135 -168 2076 129 0 14 chr17 1271187 1271481 -84166999 + AluSq SINE Alu 1 290 -23 1052 143 0 0 chr17 1271485 1271632 -84166848 - FRAM SINE Alu -30 146 1 243 321 21 57 chr17 1274765 1274958 -84163522 - L2 LINE L2 -213 3059 2874 771 181 94 7 chr17 1275072 1275221 -84163259 - FAM SINE Alu -13 162 1 354 211 26 0 chr17 1275221 1275297 -84163183 - MIR SINE MIR -112 150 73 194 357 29 14 chr17 1275304 1275444 -84163036 - L2 LINE L2 -452 2862 2721 232 315 110 0 chr17 1275506 1275579 -84162901 + MER91C DNA MER1_type 30 110 -30 2151 121 28 0 chr17 1275771 1276061 -84162419 - AluSq SINE Alu -15 298 1 2330 102 0 0 chr17 1276360 1276653 -84161827 - AluSx SINE Alu -19 293 1 1722 101 93 12 chr17 1276775 1277022 -84161458 + AluSc SINE Alu 34 300 -9 2341 89 0 0 chr17 1277182 1277513 -84160967 + AluSx SINE Alu 1 331 0 2104 141 3 0 chr17 1277532 1277837 -84160643 + AluSx SINE Alu 7 312 0 729 252 19 27 chr17 1277911 1278016 -84160464 - MIR SINE MIR -12 250 146 2474 88 0 3 chr17 1278016 1278324 -84160156 - AluSg SINE Alu -3 307 1 729 252 19 27 chr17 1278324 1278435 -84160045 - MIR SINE MIR -116 146 40 985 252 20 20 chr17 1280259 1280509 -84157971 - MIR SINE MIR -1 261 12 315 85 0 0 chr17 1282518 1282565 -84155915 + (CA)n Simple_repeat Simple_repeat 1 47 0 195 100 0 0 chr17 1282649 1282679 -84155801 + (GGGA)n Simple_repeat Simple_repeat 2 31 0 2211 133 3 0 chr17 1287291 1287600 -84150880 + AluSx SINE Alu 1 310 -2 2440 67 0 38 chr17 1289056 1289371 -84149109 - AluY SINE Alu -8 303 1 1981 89 4 8 chr17 1289373 1289632 -84148848 - AluSx SINE Alu -11 301 44 431 287 13 57 chr17 1290144 1290301 -84148179 + MIR SINE MIR 2 151 -111 2073 144 7 0 chr17 1290303 1290608 -84147872 + AluSx SINE Alu 1 307 -5 1052 174 14 55 chr17 1290608 1290827 -84147653 + AluJb SINE Alu 88 297 -15 191 317 17 0 chr17 1290831 1290891 -84147589 + MIR SINE MIR 190 250 -12 327 217 0 29 chr17 1291092 1291161 -84147319 - AluJ SINE Alu -39 263 197 743 155 47 16 chr17 1291166 1291295 -84147185 - AluJ SINE Alu -171 141 9 1926 139 42 3 chr17 1291639 1291927 -84146553 - AluSx SINE Alu -13 299 1 621 167 7 65 chr17 1291934 1292072 -84146408 - FLAM_C SINE Alu -12 131 2 239 202 85 53 chr17 1292851 1292945 -84145535 - L2 LINE L2 -3 3310 3214 1169 200 90 48 chr17 1293449 1293601 -84144879 - AluJo SINE Alu 0 302 158 2268 91 0 17 chr17 1293601 1293897 -84144583 - AluSx SINE Alu -21 291 1 1169 200 90 48 chr17 1293897 1294034 -84144446 - AluJo SINE Alu -144 158 1 187 147 44 103 chr17 1294085 1294145 -84144335 - L2 LINE L2 -9 3304 3247 252 0 0 0 chr17 1294145 1294173 -84144307 + (CAAGA)n Simple_repeat Simple_repeat 5 32 0 209 279 192 0 chr17 1294373 1294477 -84144003 - L3 LINE CR1 -22 1555 1432 1754 158 65 3 chr17 1294533 1294824 -84143656 - AluJb SINE Alu -3 309 1 513 255 151 82 chr17 1294902 1295368 -84143112 - L3 LINE CR1 -136 1441 932 1632 183 23 42 chr17 1295368 1295674 -84142806 - AluJb SINE Alu -12 300 1 513 255 151 82 chr17 1295674 1295745 -84142735 - L3 LINE CR1 -645 932 867 320 333 46 20 chr17 1295860 1296013 -84142467 - L3 LINE CR1 -720 857 701 2317 103 7 0 chr17 1296018 1296319 -84142161 - AluSq SINE Alu -10 303 1 219 254 0 17 chr17 1297200 1297259 -84141221 + MER5A DNA MER1_type 28 85 -104 1762 172 0 17 chr17 1297259 1297418 -84141062 - AluSx SINE Alu -20 292 139 1957 176 3 0 chr17 1297418 1297725 -84140755 - AluSx SINE Alu -4 308 1 1762 172 0 17 chr17 1297725 1297862 -84140618 - AluSx SINE Alu -173 139 1 1425 174 121 11 chr17 1297971 1298235 -84140245 - AluJb SINE Alu -19 293 1 649 150 0 0 chr17 1298239 1298339 -84140141 - AluJ/FLAM SINE Alu -211 101 2 2018 143 0 17 chr17 1298497 1298790 -84139690 - AluJo SINE Alu -24 288 1 640 283 59 0 chr17 1299056 1299243 -84139237 - MIR SINE MIR -4 258 61 2987 165 34 36 chr17 1299580 1299750 -84138730 - L1MA7 LINE L1 0 6291 6122 1759 158 3 52 chr17 1299750 1300060 -84138420 - AluJb SINE Alu -17 295 1 2987 165 34 36 chr17 1300060 1300557 -84137923 - L1MA7 LINE L1 -169 6122 5625 2454 80 0 0 chr17 1301341 1301640 -84136840 - AluY SINE Alu -12 299 1 1002 152 0 0 chr17 1301640 1301785 -84136695 - AluSq/x SINE Alu -167 145 1 238 294 327 20 chr17 1302095 1302248 -84136232 - MIR SINE MIR -62 200 1 1947 146 3 33 chr17 1302314 1302616 -84135864 - AluJb SINE Alu -19 293 1 2315 85 11 0 chr17 1302653 1302961 -84135519 + AluSq SINE Alu 1 311 0 1703 128 3 104 chr17 1304215 1304543 -84133937 - AluYa5 SINE Alu -14 297 3 192 40 0 0 chr17 1305453 1305478 -84133002 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2027 135 0 44 chr17 1305725 1306043 -84132437 + AluSx SINE Alu 2 305 -7 1773 152 0 14 chr17 1306048 1306325 -84132155 + AluSx SINE Alu 1 273 -39 336 226 39 10 chr17 1306329 1306431 -84132049 - MIR SINE MIR -48 214 110 2182 126 0 0 chr17 1306660 1306953 -84131527 - AluSx SINE Alu -19 293 1 2101 133 33 0 chr17 1307199 1307500 -84130980 + AluSx SINE Alu 1 311 -1 696 255 115 36 chr17 1308487 1308765 -84129715 - L2 LINE L2 -8 3305 3006 1937 123 37 0 chr17 1308824 1309093 -84129387 - AluJo SINE Alu -33 279 1 2455 55 0 14 chr17 1309612 1309957 -84128523 + AluY SINE Alu 1 341 0 2198 139 0 0 chr17 1310141 1310443 -84128037 - AluJb SINE Alu -10 302 1 1554 157 16 72 chr17 1310443 1310761 -84127719 - AluJb SINE Alu -12 300 1 2344 93 0 7 chr17 1311371 1311671 -84126809 + AluSx SINE Alu 1 298 -14 25 0 0 0 chr17 1311772 1311797 -84126683 + AT_rich Low_complexity Low_complexity 1 25 0 2053 96 8 0 chr17 1312032 1312292 -84126188 + AluSq SINE Alu 1 262 -51 917 26 17 0 chr17 1312292 1312407 -84126073 + (TAAAA)n Simple_repeat Simple_repeat 2 118 0 355 290 22 0 chr17 1312874 1313012 -84125468 + L1ME LINE L1 4771 4911 -1235 1384 192 73 8 chr17 1313146 1313407 -84125073 - AluJo SINE Alu -34 278 1 709 199 18 60 chr17 1313409 1313464 -84125016 + L1ME LINE L1 5087 5143 -1021 1670 181 3 29 chr17 1313464 1313779 -84124701 - AluJo SINE Alu -5 307 1 709 199 18 60 chr17 1313779 1313842 -84124638 + L1ME LINE L1 5143 5207 -957 2198 85 0 75 chr17 1313842 1314161 -84124319 + AluSx SINE Alu 1 295 -17 709 199 18 60 chr17 1314161 1314417 -84124063 + L1ME LINE L1 5207 5442 -722 1023 128 0 0 chr17 1314497 1314638 -84123842 - AluJb SINE Alu -14 298 158 1340 237 101 22 chr17 1314654 1315160 -84123320 + L1ME2 LINE L1 4084 4629 -1517 506 233 24 99 chr17 1315162 1315361 -84123119 + L1ME2 LINE L1 4796 5008 -1138 1881 175 14 0 chr17 1315361 1315653 -84122827 + AluJb SINE Alu 1 296 -16 2207 115 0 3 chr17 1315660 1315948 -84122532 + AluSx SINE Alu 5 291 -21 506 233 24 99 chr17 1315948 1315993 -84122487 + L1ME2 LINE L1 5014 5029 -1117 1290 186 90 21 chr17 1315999 1316289 -84122191 - AluJb SINE Alu -2 310 1 1991 114 30 30 chr17 1316298 1316458 -84122022 - AluSx SINE Alu -14 298 136 2400 94 0 0 chr17 1316458 1316755 -84121725 - AluY SINE Alu -14 297 1 1991 114 30 30 chr17 1316755 1316892 -84121588 - AluSx SINE Alu -175 137 1 2051 127 0 44 chr17 1316897 1317065 -84121415 - AluSx SINE Alu -11 301 152 2357 81 0 3 chr17 1317065 1317360 -84121120 - AluY SINE Alu -17 294 1 2051 127 0 44 chr17 1317360 1317506 -84120974 - AluSx SINE Alu -160 152 1 738 209 177 50 chr17 1317571 1317844 -84120636 + L1ME2 LINE L1 5107 5344 -820 1595 188 31 10 chr17 1317844 1318132 -84120348 + AluJo SINE Alu 1 294 -18 738 209 177 50 chr17 1318132 1318291 -84120189 + L1ME2 LINE L1 5344 5586 -578 1126 144 51 0 chr17 1318297 1318492 -84119988 + MER30 DNA MER1_type 26 230 0 1660 196 50 30 chr17 1318502 1318900 -84119580 + L1ME2 LINE L1 5587 5992 -172 335 274 0 32 chr17 1318914 1319009 -84119471 - L1MC4 LINE L1 -1334 6708 6617 936 151 81 29 chr17 1319022 1319194 -84119286 - AluJb SINE Alu -47 265 85 189 0 0 0 chr17 1319194 1319215 -84119265 + (TTTTC)n Simple_repeat Simple_repeat 2 22 0 1910 121 4 4 chr17 1319220 1319477 -84119003 - AluSx SINE Alu -37 275 19 2527 209 43 34 chr17 1322869 1323031 -84115449 + L1M4 LINE L1 4498 4657 -1489 2129 145 0 0 chr17 1323031 1323335 -84115145 + AluSx SINE Alu 1 304 -8 2527 209 43 34 chr17 1323335 1323807 -84114673 + L1M4 LINE L1 4657 5141 -1005 1962 139 34 0 chr17 1323807 1324102 -84114378 + AluSx SINE Alu 1 305 -7 2527 209 43 34 chr17 1324102 1324140 -84114340 + L1M4 LINE L1 5141 5177 -969 563 193 0 35 chr17 1324140 1324254 -84114226 + AluJb SINE Alu 11 120 -192 408 181 0 0 chr17 1324254 1324337 -84114143 + (CA)n Simple_repeat Simple_repeat 1 83 0 1232 150 0 0 chr17 1324359 1324539 -84113941 + AluJb SINE Alu 132 311 -1 1231 120 89 4 chr17 1324539 1324764 -84113716 + L1MB4 LINE L1 5904 6147 -33 330 22 0 0 chr17 1325648 1325694 -84112786 + L1MB3 LINE L1 6138 6183 0 504 279 8 0 chr17 1325695 1325817 -84112663 - MER3 DNA MER1_type -81 128 6 1812 95 26 0 chr17 1325975 1326273 -84112207 + AluSx SINE Alu 63 366 0 1406 181 102 11 chr17 1326438 1326703 -84111777 + AluJb SINE Alu 1 289 -23 282 333 42 42 chr17 1326712 1326884 -84111596 + L1M4 LINE L1 3852 4026 -2120 2269 124 0 0 chr17 1326884 1327190 -84111290 + AluSx SINE Alu 1 306 -6 282 333 42 42 chr17 1327190 1327278 -84111202 + L1M4 LINE L1 4025 4112 -2034 2683 40 0 3 chr17 1327346 1327650 -84110830 + AluYb8 SINE Alu 5 307 -11 465 213 69 23 chr17 1327664 1327838 -84110642 + L1M4 LINE L1 4378 4559 -1587 1893 74 12 4 chr17 1328130 1328373 -84110107 + AluSg SINE Alu 44 288 -22 304 206 32 90 chr17 1328491 1328646 -84109834 - L1MC5 LINE L1 0 7961 7816 2162 107 0 20 chr17 1328661 1328959 -84109521 - AluSg SINE Alu -18 292 1 2044 125 0 38 chr17 1329138 1329451 -84109029 + AluSx SINE Alu 1 301 -11 517 192 0 0 chr17 1329452 1329530 -84108950 - AluJ/FLAM SINE Alu -232 80 3 560 252 19 44 chr17 1329544 1329703 -84108777 + L2 LINE L2 3156 3310 -3 1118 170 58 0 chr17 1330157 1330345 -84108135 - AluJb SINE Alu -17 295 97 1982 125 4 0 chr17 1330345 1330617 -84107863 + AluSx SINE Alu 24 296 -16 258 260 78 0 chr17 1330818 1330895 -84107585 + MLT1J LTR MaLR 5 87 -424 869 205 0 6 chr17 1330909 1331065 -84107415 - FRAM SINE Alu -25 151 1 456 269 156 48 chr17 1331065 1331418 -84107062 + MLT1J LTR MaLR 75 465 -46 309 300 133 40 chr17 1331445 1331524 -84106956 + MIR SINE MIR 59 129 -133 2007 105 14 14 chr17 1331524 1331809 -84106671 + AluSg SINE Alu 26 310 0 309 300 133 40 chr17 1331809 1331879 -84106601 + MIR SINE MIR 129 222 -40 2309 120 0 0 chr17 1332232 1332540 -84105940 - AluSx SINE Alu -4 308 1 1569 156 40 13 chr17 1332546 1332848 -84105632 - L1MA7 LINE L1 0 6291 5982 762 181 12 6 chr17 1332894 1333054 -84105426 + MER3 DNA MER1_type 5 165 -44 1681 184 25 4 chr17 1333065 1333343 -84105137 - AluJb SINE Alu -28 284 1 426 20 0 0 chr17 1333343 1333357 -84105123 + (TG)n Simple_repeat Simple_repeat 1 65 0 426 20 0 0 chr17 1333357 1333408 -84105072 + (TG)n Simple_repeat Simple_repeat 2 52 0 1961 101 75 0 chr17 1333435 1333703 -84104777 - AluSx SINE Alu -24 288 1 1896 135 3 30 chr17 1334237 1334534 -84103946 + AluJb SINE Alu 1 289 -23 2216 108 7 0 chr17 1336779 1337075 -84101405 - AluSx SINE Alu -9 303 6 2202 107 7 0 chr17 1337094 1337384 -84101096 - AluSx SINE Alu -20 292 1 21 36 0 0 chr17 1337659 1337687 -84100793 + AT_rich Low_complexity Low_complexity 1 28 0 213 39 0 0 chr17 1339323 1339349 -84099131 + (CAAT)n Simple_repeat Simple_repeat 1 26 0 685 188 9 0 chr17 1339482 1339594 -84098886 - MER81 DNA DNA -1 113 1 234 0 0 0 chr17 1339781 1339807 -84098673 + (T)n Simple_repeat Simple_repeat 1 26 0 820 167 0 0 chr17 1340052 1340184 -84098296 + FLAM_C SINE Alu 1 132 -1 2255 107 13 0 chr17 1341185 1341485 -84096995 - AluSq SINE Alu -9 304 1 2294 88 10 0 chr17 1341497 1341791 -84096689 - AluSx SINE Alu -15 297 1 811 221 80 6 chr17 1341848 1342011 -84096469 + FAM SINE Alu 1 175 0 426 272 47 67 chr17 1342036 1342290 -84096190 - L1ME LINE L1 -370 5751 5503 2635 31 0 0 chr17 1342331 1342625 -84095855 - AluY SINE Alu -17 294 1 1453 179 4 12 chr17 1343084 1343335 -84095145 - AluJb SINE Alu -63 249 1 2335 111 3 3 chr17 1343966 1344273 -84094207 + AluSq SINE Alu 1 307 -6 753 122 16 0 chr17 1344273 1344396 -84094084 - L1PB1 LINE L1 -285 5866 5742 394 296 53 4 chr17 1346143 1346302 -84092178 + L1MC4a LINE L1 5500 5662 -580 566 240 128 25 chr17 1346318 1346560 -84091920 + L1MC4a LINE L1 5712 5978 -1830 1007 83 0 0 chr17 1346564 1346685 -84091795 + AluY SINE Alu 1 121 -190 182 61 0 30 chr17 1346685 1346718 -84091762 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 1869 186 3 0 chr17 1346722 1347028 -84091452 + AluJo SINE Alu 1 307 -5 1562 151 4 12 chr17 1354886 1355137 -84083343 + AluJo SINE Alu 30 278 -34 290 197 26 0 chr17 1355140 1355216 -84083264 + GA-rich Low_complexity Low_complexity 3 80 0 1242 211 48 0 chr17 1355360 1355630 -84082850 - MER58B DNA MER1_type -2 339 57 423 0 0 0 chr17 1355661 1355708 -84082772 + (CA)n Simple_repeat Simple_repeat 2 48 0 184 121 45 45 chr17 1355746 1355812 -84082668 + (CAGG)n Simple_repeat Simple_repeat 2 67 0 254 291 8 8 chr17 1355867 1355994 -84082486 + (CA)n Simple_repeat Simple_repeat 1 127 0 1861 169 0 3 chr17 1355995 1356290 -84082190 + AluSx SINE Alu 1 294 -18 2306 118 3 0 chr17 1356291 1356596 -84081884 + AluSq SINE Alu 1 306 -7 2354 98 13 7 chr17 1356596 1356902 -84081578 + AluSx SINE Alu 1 308 -4 207 284 11 21 chr17 1356981 1357076 -84081404 + (CATA)n Simple_repeat Simple_repeat 1 94 0 212 254 11 79 chr17 1357127 1357304 -84081176 + (CAGA)n Simple_repeat Simple_repeat 4 168 0 * 236 234 0 65 chr17 1357203 1357310 -84081170 + (CAGAGA)n Simple_repeat Simple_repeat 1 100 0 323 161 151 21 chr17 1357326 1357419 -84081061 + L1MB3 LINE L1 6079 6183 0 278 333 0 33 chr17 1357574 1357727 -84080753 + G-rich Low_complexity Low_complexity 2 149 0 1810 125 3 97 chr17 1357859 1358188 -84080292 + AluJb SINE Alu 1 298 -14 2244 188 41 46 chr17 1359057 1359641 -84078839 + L1MC4 LINE L1 7462 8042 0 329 323 39 8 chr17 1360500 1360627 -84077853 + MIR SINE MIR 117 247 -15 318 48 0 0 chr17 1360859 1360901 -84077579 + 5S rRNA rRNA 1 42 -79 313 162 118 0 chr17 1361002 1361070 -84077410 + MIR SINE MIR 187 262 0 239 331 74 33 chr17 1362940 1363061 -84075419 - L2 LINE L2 -14 3258 3133 203 241 0 19 chr17 1364029 1364083 -84074397 + G-rich Low_complexity Low_complexity 5 57 0 2075 160 108 5 chr17 1364968 1365356 -84073124 + MSTA LTR MaLR 1 428 0 1399 142 158 24 chr17 1365751 1366005 -84072475 - AluSg1 SINE Alu -21 288 1 266 367 51 25 chr17 1366124 1366320 -84072160 - L2 LINE L2 -493 2821 2621 815 144 0 30 chr17 1366480 1366601 -84071879 + FLAM_C SINE Alu 1 119 -193 217 86 0 0 chr17 1366601 1366636 -84071844 + (CAAAA)n Simple_repeat Simple_repeat 1 50 0 194 326 0 0 chr17 1367389 1367435 -84071045 + L2 LINE L2 3140 3185 -87 455 238 90 13 chr17 1367609 1367771 -84070709 - MIR SINE MIR -56 206 34 630 244 34 118 chr17 1367927 1368053 -84070427 + L1MD2 LINE L1 4358 4493 -1653 2134 100 19 32 chr17 1368053 1368362 -84070118 + AluSx SINE Alu 1 305 -7 630 244 34 118 chr17 1368362 1368649 -84069831 + L1MD2 LINE L1 4493 4736 -1410 636 211 55 0 chr17 1368665 1368793 -84069687 + AluJo SINE Alu 2 136 -176 5296 187 25 40 chr17 1368796 1369196 -84069284 + L1MD2 LINE L1 4889 5293 -1066 1794 168 16 10 chr17 1369196 1369505 -84068975 + AluJb SINE Alu 1 311 -1 5296 187 25 40 chr17 1369505 1370593 -84067887 + L1MD2 LINE L1 5293 6349 -10 252 111 0 0 chr17 1370849 1370894 -84067586 + (A)n Simple_repeat Simple_repeat 1 45 0 505 139 0 40 chr17 1371266 1371507 -84066973 + AluJ SINE Alu 2 312 0 21 36 0 0 chr17 1371507 1371535 -84066945 + AT_rich Low_complexity Low_complexity 1 28 0 2048 123 7 10 chr17 1371538 1371831 -84066649 + AluSx SINE Alu 1 292 -20 2205 123 3 0 chr17 1371833 1372133 -84066347 - AluSx SINE Alu -9 303 3 1260 73 6 0 chr17 1372277 1372441 -84066039 - L1PA5 LINE L1 -4 6150 5986 825 169 0 0 chr17 1372456 1372580 -84065900 - FLAM_C SINE Alu -19 124 1 759 150 0 18 chr17 1372624 1372842 -84065638 - AluJb SINE Alu -15 297 2 1927 184 147 42 chr17 1372948 1373330 -84065150 + L1ME1 LINE L1 5143 5484 -682 1689 155 58 0 chr17 1373330 1373608 -84064872 + AluSx SINE Alu 5 298 -14 1927 184 147 42 chr17 1373608 1373656 -84064824 + L1ME1 LINE L1 5484 5526 -640 2263 114 0 0 chr17 1373656 1373953 -84064527 + AluSx SINE Alu 1 297 -15 1927 184 147 42 chr17 1373953 1374171 -84064309 + L1ME1 LINE L1 5526 5828 -338 1640 186 3 14 chr17 1374194 1374484 -84063996 + AluJo SINE Alu 14 300 -12 353 300 50 50 chr17 1374584 1374804 -84063676 - MIR SINE MIR -19 243 24 975 182 0 13 chr17 1375886 1376045 -84062435 - AluJb SINE Alu -22 290 134 1681 198 3 0 chr17 1376596 1376879 -84061601 + AluSx SINE Alu 1 284 -28 2117 105 0 51 chr17 1376984 1377299 -84061181 - AluSx SINE Alu -13 299 1 201 167 0 0 chr17 1377692 1377728 -84060752 + (TA)n Simple_repeat Simple_repeat 1 36 0 1931 166 0 0 chr17 1377728 1378023 -84060457 - AluSx SINE Alu -17 295 1 23 33 0 0 chr17 1378122 1378152 -84060328 + AT_rich Low_complexity Low_complexity 1 30 0 1787 147 48 27 chr17 1378217 1378510 -84059970 + AluJo SINE Alu 1 299 -13 1947 143 0 23 chr17 1378513 1378848 -84059632 + AluSx SINE Alu 1 312 0 22 70 0 0 chr17 1378856 1378899 -84059581 + AT_rich Low_complexity Low_complexity 1 43 0 1648 164 12 53 chr17 1378904 1379227 -84059253 + AluSx SINE Alu 1 310 -2 201 254 0 0 chr17 1379509 1379568 -84058912 + (TA)n Simple_repeat Simple_repeat 1 59 0 943 160 0 18 chr17 1379897 1380066 -84058414 + FRAM SINE Alu 1 166 0 200 398 42 0 chr17 1380492 1380610 -84057870 - L2 LINE L2 -4 3268 3146 1581 181 57 0 chr17 1380814 1381095 -84057385 + AluJb SINE Alu 3 299 -13 1828 128 36 43 chr17 1381123 1381287 -84057193 - AluSx SINE Alu -9 303 140 2199 101 7 3 chr17 1381287 1381574 -84056906 - AluSx SINE Alu -20 292 5 1828 128 36 43 chr17 1381574 1381714 -84056766 - AluSx SINE Alu -172 140 1 198 209 0 0 chr17 1381761 1381804 -84056676 - MIR SINE MIR 0 262 220 793 242 10 48 chr17 1381869 1382154 -84056326 + LTR16A LTR ERVL 107 434 -16 800 178 0 0 chr17 1382192 1382327 -84056153 - FLAM_A SINE Alu 0 142 8 28 0 0 0 chr17 1382671 1382699 -84055781 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr17 1383008 1383031 -84055449 + AT_rich Low_complexity Low_complexity 1 23 0 2502 57 0 7 chr17 1383297 1383598 -84054882 + AluY SINE Alu 1 299 -12 437 212 144 17 chr17 1384923 1385041 -84053439 + MER94 DNA DNA 1 133 -1 213 121 0 0 chr17 1387127 1387160 -84051320 + (CA)n Simple_repeat Simple_repeat 2 34 0 22 56 0 0 chr17 1389104 1389140 -84049340 + AT_rich Low_complexity Low_complexity 1 36 0 239 218 91 18 chr17 1389168 1389333 -84049147 - L1ME4a LINE L1 -33 6088 5912 2266 97 0 7 chr17 1389644 1389954 -84048526 + AluSc SINE Alu 2 309 0 2324 66 11 0 chr17 1390182 1390469 -84048011 + AluY SINE Alu 1 290 -21 1318 160 22 9 chr17 1390691 1390922 -84047558 + L1MC1 LINE L1 6095 6328 -5 182 191 64 0 chr17 1390947 1390994 -84047486 - L2 LINE L2 -3 3310 3261 2132 128 0 0 chr17 1391017 1391329 -84047151 + AluSx SINE Alu 1 312 0 521 266 46 66 chr17 1391359 1391419 -84047061 + L1ME LINE L1 5517 5577 -585 1822 165 0 52 chr17 1391419 1391747 -84046733 + AluJo SINE Alu 1 311 -1 521 266 46 66 chr17 1391747 1391839 -84046641 + L1ME LINE L1 5577 5669 -493 1545 183 68 4 chr17 1391839 1392118 -84046362 - AluJb SINE Alu -15 297 1 521 266 46 66 chr17 1392118 1392263 -84046217 + L1ME LINE L1 5669 5800 -362 1969 133 4 0 chr17 1392263 1392533 -84045947 + AluJo SINE Alu 1 271 -41 521 266 46 66 chr17 1392533 1392552 -84045928 + L1ME LINE L1 5800 5818 -344 302 93 0 0 chr17 1392583 1392626 -84045854 + MADE1 DNA Mariner 2 44 -36 2265 132 91 5 chr17 1393070 1393464 -84045016 + MSTA LTR MaLR 1 428 0 1875 134 35 3 chr17 1393665 1393949 -84044531 - AluSx SINE Alu -19 293 1 939 269 57 61 chr17 1393972 1394652 -84043828 - L2 LINE L2 -5 3308 2625 186 43 0 0 chr17 1395831 1395854 -84042626 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 299 275 62 39 chr17 1395893 1396071 -84042409 + L1MEd LINE L1 5 186 -5933 500 289 98 48 chr17 1396289 1396626 -84041854 + L1MEd LINE L1 860 1179 -1805 324 0 0 0 chr17 1396626 1396662 -84041818 + (CCAA)n Simple_repeat Simple_repeat 2 37 0 500 289 98 48 chr17 1396662 1397105 -84041375 + L1MEd LINE L1 1179 1598 -1386 1740 131 10 89 chr17 1397105 1397418 -84041062 + AluSx SINE Alu 1 288 -24 500 289 98 48 chr17 1397418 1397823 -84040657 + L1MEd LINE L1 1598 2123 -861 * 3578 203 45 62 chr17 1397805 1397936 -84040544 + L1ME1 LINE L1 5187 5319 -847 2147 98 4 0 chr17 1397936 1398212 -84040268 + AluSp SINE Alu 34 310 -3 2004 116 18 4 chr17 1398213 1398527 -84039953 + AluSg SINE Alu 1 318 0 2032 99 0 31 chr17 1398536 1398828 -84039652 + AluSx SINE Alu 14 296 -16 3578 203 45 62 chr17 1398828 1399660 -84038820 + L1ME1 LINE L1 5327 6162 -4 591 233 91 47 chr17 1399731 1399965 -84038515 + L1ME3A LINE L1 5708 5948 -218 2082 135 0 26 chr17 1399968 1400142 -84038338 - AluSx SINE Alu -9 303 139 2275 85 7 10 chr17 1400142 1400437 -84038043 - AluSq SINE Alu -19 294 1 2082 135 0 26 chr17 1400437 1400573 -84037907 - AluSx SINE Alu -173 139 1 228 135 0 0 chr17 1400589 1400626 -84037854 + (CATATA)n Simple_repeat Simple_repeat 4 40 0 387 235 45 68 chr17 1400669 1400801 -84037679 + L1ME3A LINE L1 5965 6093 -77 284 276 97 48 chr17 1401402 1401547 -84036933 + MIR SINE MIR 72 223 -39 2593 80 0 0 chr17 1401814 1402154 -84036326 + AluSx SINE Alu 1 340 0 279 0 0 0 chr17 1402216 1402247 -84036233 + (A)n Simple_repeat Simple_repeat 1 31 0 2257 82 0 4 chr17 1403326 1403607 -84034873 + AluSg SINE Alu 1 280 -30 24 32 0 0 chr17 1404134 1404165 -84034315 + AT_rich Low_complexity Low_complexity 1 31 0 224 304 0 0 chr17 1404423 1404479 -84034001 - L2 LINE L2 -3 3269 3214 23 54 0 0 chr17 1406148 1406185 -84032295 + AT_rich Low_complexity Low_complexity 1 37 0 2095 111 3 3 chr17 1406185 1406473 -84032007 - AluSx SINE Alu -24 288 1 21 36 0 0 chr17 1406605 1406633 -84031847 + AT_rich Low_complexity Low_complexity 1 28 0 1104 129 6 6 chr17 1406633 1406796 -84031684 - AluSg/x SINE Alu -27 283 121 192 40 0 0 chr17 1407673 1407698 -84030782 + (GGGAA)n Simple_repeat Simple_repeat 3 27 0 459 0 0 0 chr17 1408612 1408663 -84029817 + (CA)n Simple_repeat Simple_repeat 1 51 0 2111 93 72 0 chr17 1409000 1409278 -84029202 - AluSq SINE Alu -15 298 1 22 35 0 0 chr17 1410717 1410746 -84027734 + AT_rich Low_complexity Low_complexity 1 29 0 338 174 116 12 chr17 1411307 1411393 -84027087 + L1ME4a LINE L1 5710 5804 -317 419 224 68 20 chr17 1411481 1411628 -84026852 + L1ME4a LINE L1 5944 6097 -24 25 51 0 0 chr17 1411717 1411756 -84026724 + AT_rich Low_complexity Low_complexity 1 39 0 246 273 91 53 chr17 1412406 1412538 -84025942 - MIR3 SINE MIR -1 207 71 270 195 26 52 chr17 1413158 1413235 -84025245 - L3b LINE CR1 -87 1496 1422 825 108 0 25 chr17 1413481 1413601 -84024879 - FLAM_C SINE Alu -16 117 1 898 202 106 5 chr17 1413817 1414015 -84024465 + MER20 DNA MER1_type 2 219 0 2345 67 0 57 chr17 1414141 1414456 -84024024 + AluY SINE Alu 1 297 -14 882 157 119 0 chr17 1414466 1414625 -84023855 + FAM SINE Alu 1 49 0 2089 128 3 0 chr17 1415309 1415598 -84022882 + AluSx SINE Alu 1 290 -22 2124 140 3 0 chr17 1417294 1417594 -84020886 - AluSx SINE Alu -10 302 2 2001 146 3 7 chr17 1417597 1417892 -84020588 - AluJo SINE Alu -18 294 1 478 285 39 0 chr17 1417893 1418023 -84020457 - Charlie8 DNA MER1_type -2278 139 5 2261 99 0 3 chr17 1418574 1418887 -84019593 + AluSq SINE Alu 1 312 -1 222 260 52 39 chr17 1418915 1418992 -84019488 - MIR SINE MIR -99 109 32 185 206 0 0 chr17 1419033 1419067 -84019413 + MIR SINE MIR 65 98 -164 457 231 34 0 chr17 1419125 1419242 -84019238 + L1MC4 LINE L1 7922 8042 0 1935 130 23 0 chr17 1419416 1419716 -84018764 + AluSx SINE Alu 1 307 -5 1941 123 41 0 chr17 1419722 1419840 -84018640 + AluSg SINE Alu 1 113 -197 222 37 0 0 chr17 1419840 1419867 -84018613 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1941 123 41 0 chr17 1419867 1420041 -84018439 + AluSg SINE Alu 113 305 -5 251 275 14 14 chr17 1420114 1420183 -84018297 - MIR3 SINE MIR -129 79 11 2303 51 0 24 chr17 1420802 1421096 -84017384 - AluY SINE Alu -17 294 8 1295 184 3 89 chr17 1421206 1421533 -84016947 - AluJo SINE Alu -12 300 2 1750 158 14 0 chr17 1422303 1422594 -84015886 - AluJo SINE Alu -17 295 1 2314 78 7 0 chr17 1423730 1424039 -84014441 + AluSp SINE Alu 1 311 -2 2121 86 41 0 chr17 1424042 1424334 -84014146 + AluSc SINE Alu 1 304 -5 355 331 35 14 chr17 1424397 1424542 -84013938 + MIR3 SINE MIR 2 149 -59 355 293 67 43 chr17 1424561 1424725 -84013755 - MER5B DNA MER1_type -10 168 1 1740 152 26 69 chr17 1424741 1425030 -84013450 + MER58B DNA MER1_type 9 283 -2137 1956 60 0 8 chr17 1425030 1425318 -84013162 - AluY SINE Alu 0 321 36 1740 152 26 69 chr17 1425318 1425375 -84013105 + MER58B DNA MER1_type 283 341 0 1907 147 0 0 chr17 1426246 1426545 -84011935 - AluSx SINE Alu -13 299 1 341 321 177 55 chr17 1426624 1426951 -84011529 - L2 LINE L2 0 3272 2906 2785 7 0 0 chr17 1427033 1427343 -84011137 + AluY SINE Alu 1 310 -1 333 236 14 0 chr17 1427357 1427429 -84011051 - L2 LINE L2 -561 2753 2681 5330 54 9 6 chr17 1427447 1428134 -84010346 + SVA Other Other 719 1386 0 1578 171 0 43 chr17 1428390 1428694 -84009786 + AluJb SINE Alu 1 291 -21 225 83 0 0 chr17 1428862 1428898 -84009582 + (TATG)n Simple_repeat Simple_repeat 2 37 0 974 108 0 51 chr17 1428900 1428991 -84009489 - AluSg/x SINE Alu -26 283 202 2222 77 20 3 chr17 1428991 1429288 -84009192 - AluSc SINE Alu -7 302 1 974 108 0 51 chr17 1429288 1429353 -84009127 - AluSg/x SINE Alu -107 202 135 359 220 43 26 chr17 1429478 1429604 -84008876 + L2 LINE L2 2764 2952 -361 1991 107 30 3 chr17 1429647 1429946 -84008534 + AluSg SINE Alu 1 307 -3 267 103 0 0 chr17 1429949 1429988 -84008492 + (CA)n Simple_repeat Simple_repeat 2 40 0 472 225 176 7 chr17 1430003 1430145 -84008335 - MIR SINE MIR -10 252 87 1900 140 3 7 chr17 1430184 1430484 -84007996 + AluSx SINE Alu 1 299 -13 1277 164 22 4 chr17 1430491 1430723 -84007757 + AluJo SINE Alu 61 296 -16 1762 130 58 0 chr17 1430729 1431006 -84007474 + AluSg SINE Alu 6 298 -12 1629 118 121 4 chr17 1431333 1431605 -84006875 + AluJb SINE Alu 1 304 -8 2175 105 0 13 chr17 1432623 1432936 -84005544 + AluSx SINE Alu 1 309 -3 2260 82 0 25 chr17 1432936 1433250 -84005230 + AluY SINE Alu 1 307 -4 302 272 12 0 chr17 1433274 1433355 -84005125 + L1ME3A LINE L1 6065 6146 -24 1967 151 0 0 chr17 1436530 1436828 -84001652 + AluSx SINE Alu 1 298 -14 380 222 86 0 chr17 1437067 1437148 -84001332 + MER20B DNA MER1_type 88 175 -608 1934 99 35 0 chr17 1437148 1437432 -84001048 + AluSx SINE Alu 1 294 -18 515 182 159 30 chr17 1437533 1437665 -84000815 - MER58C DNA MER1_type -8 207 59 1292 188 38 24 chr17 1439123 1439410 -83999070 - AluJb SINE Alu -20 292 2 2376 78 0 0 chr17 1439608 1439957 -83998523 - AluY SINE Alu 0 349 1 738 188 8 0 chr17 1439984 1440112 -83998368 - FLAM_C SINE Alu -12 131 3 1862 133 0 41 chr17 1440405 1440540 -83997940 + AluSx SINE Alu 5 144 -168 2205 82 0 3 chr17 1440540 1440832 -83997648 + AluY SINE Alu 1 291 -20 2292 57 0 51 chr17 1440836 1441152 -83997328 + AluY SINE Alu 4 303 -8 1862 133 0 41 chr17 1441152 1441326 -83997154 + AluSx SINE Alu 147 306 -6 348 325 17 8 chr17 1441672 1441789 -83996691 - MIR SINE MIR -88 174 57 1009 168 0 0 chr17 1441793 1441960 -83996520 + FRAM SINE Alu 1 167 -9 1647 181 10 3 chr17 1442240 1442532 -83995948 + AluJo SINE Alu 3 296 -16 516 135 14 0 chr17 1442929 1443003 -83995477 + AluJ/FLAM SINE Alu 2 76 -236 1805 130 91 0 chr17 1443016 1443301 -83995179 - AluSx SINE Alu -1 311 1 2181 110 0 3 chr17 1443342 1443651 -83994829 + AluSx SINE Alu 1 308 -4 21 0 0 0 chr17 1443655 1443676 -83994804 + AT_rich Low_complexity Low_complexity 1 21 0 185 289 0 0 chr17 1444145 1444190 -83994290 + L2 LINE L2 2933 2977 -336 2886 185 25 74 chr17 1444342 1444567 -83993913 - MER82 DNA MER2_type 0 653 418 2168 73 28 0 chr17 1444567 1444853 -83993627 + AluY SINE Alu 1 294 -17 2886 185 25 74 chr17 1444853 1445144 -83993336 - MER82 DNA MER2_type -235 418 177 1800 139 0 32 chr17 1445144 1445289 -83993191 + AluSx SINE Alu 1 149 -163 1688 120 94 0 chr17 1445289 1445564 -83992916 + AluSg SINE Alu 1 301 -9 1800 139 0 32 chr17 1445564 1445728 -83992752 + AluSx SINE Alu 149 300 -12 2886 185 25 74 chr17 1445728 1445897 -83992583 - MER82 DNA MER2_type -476 177 1 1190 197 33 0 chr17 1445938 1446151 -83992329 + MER58A DNA MER1_type 1 220 -4 715 188 0 0 chr17 1446758 1446870 -83991610 + FLAM_C SINE Alu 9 120 -23 2001 128 0 0 chr17 1447050 1447346 -83991134 + AluSx SINE Alu 1 296 -16 1920 127 27 3 chr17 1448304 1448596 -83989884 - AluSp SINE Alu -14 299 1 2297 81 3 0 chr17 1448696 1448991 -83989489 - AluSp SINE Alu -17 296 1 2279 46 11 0 chr17 1449034 1449375 -83989105 - AluY SINE Alu 0 344 1 1641 182 0 10 chr17 1449673 1449969 -83988511 + AluJb SINE Alu 1 293 -19 2238 90 0 7 chr17 1450115 1450415 -83988065 - AluSx SINE Alu -14 298 1 252 269 35 122 chr17 1450532 1450590 -83987890 + L2 LINE L2 2689 2750 -564 655 143 17 0 chr17 1450590 1450709 -83987771 + L1MA4 LINE L1 6169 6289 -11 252 269 35 122 chr17 1450709 1450847 -83987633 + L2 LINE L2 2750 2868 -446 * 725 315 76 60 chr17 1450839 1451661 -83986819 - L2 LINE L2 -2 3270 2453 2259 86 0 7 chr17 1452171 1452473 -83986007 - AluSg SINE Alu -10 300 1 1172 173 122 0 chr17 1452726 1452963 -83985517 + AluJo SINE Alu 16 281 -31 322 141 218 39 chr17 1452976 1453054 -83985426 - AluJb SINE Alu -10 292 201 1399 181 50 11 chr17 1453062 1453339 -83985141 - AluJo SINE Alu -24 288 1 607 307 100 40 chr17 1453339 1453861 -83984619 + L2 LINE L2 2464 3020 -252 223 293 311 0 chr17 1453945 1454051 -83984429 + L2 LINE L2 3174 3312 -1 225 0 0 0 chr17 1454301 1454326 -83984154 + (A)n Simple_repeat Simple_repeat 1 25 0 2132 109 3 0 chr17 1454799 1455093 -83983387 + AluSq SINE Alu 1 295 -18 392 153 0 0 chr17 1455408 1455467 -83983013 - U4 snRNA snRNA -86 59 1 21 0 0 0 chr17 1456260 1456281 -83982199 + AT_rich Low_complexity Low_complexity 1 21 0 237 273 26 0 chr17 1456352 1456429 -83982051 + GA-rich Low_complexity Low_complexity 1 79 0 289 323 139 27 chr17 1456579 1456802 -83981678 + MIR SINE MIR 15 262 0 473 210 49 49 chr17 1456847 1457009 -83981471 + MER104 DNA Tc2 1 162 -18 4796 187 30 30 chr17 1457360 1457467 -83981013 + L1MB2 LINE L1 4280 4386 -1785 624 199 0 57 chr17 1457467 1457579 -83980901 + AluJo/FLAM SINE Alu 1 105 -197 2128 125 0 0 chr17 1457579 1457884 -83980596 - AluSx SINE Alu -7 305 1 624 199 0 57 chr17 1457884 1457912 -83980568 + AluJo/FLAM SINE Alu 105 133 -169 4796 187 30 30 chr17 1457912 1458834 -83979646 + L1MB2 LINE L1 4386 5318 -853 2313 51 41 0 chr17 1458834 1459129 -83979351 - AluYa5 SINE Alu -4 307 1 4796 187 30 30 chr17 1459129 1459940 -83978540 + L1MB2 LINE L1 5318 6128 -43 2097 115 0 0 chr17 1459942 1460238 -83978242 + AluSx SINE Alu 1 296 -16 1788 152 14 7 chr17 1460250 1460547 -83977933 + AluSx SINE Alu 3 301 -11 1768 133 6 60 chr17 1460559 1460708 -83977772 + AluJb SINE Alu 1 126 -186 2564 43 0 0 chr17 1460708 1461011 -83977469 + AluY SINE Alu 1 303 -8 1768 133 6 60 chr17 1461011 1461178 -83977302 + AluJb SINE Alu 126 300 -12 1671 159 3 7 chr17 1461184 1461467 -83977013 + AluJo SINE Alu 1 282 -30 1784 128 17 17 chr17 1461545 1461835 -83976645 + AluSx SINE Alu 2 291 -21 246 62 0 0 chr17 1461847 1461879 -83976601 + (TA)n Simple_repeat Simple_repeat 1 32 0 485 180 172 0 chr17 1461894 1462016 -83976464 + L1M4 LINE L1 5321 5463 -715 2711 196 68 44 chr17 1462016 1462800 -83975680 + L1MB5 LINE L1 4618 5425 -744 836 170 52 72 chr17 1462796 1462960 -83975520 + L1MB5 LINE L1 5893 6054 -120 * 2532 40 0 0 chr17 1462960 1463262 -83975218 + AluY SINE Alu 1 302 -9 836 170 52 72 chr17 1463262 1463291 -83975189 + L1MB5 LINE L1 6054 6082 -92 1185 131 115 37 chr17 1463538 1463782 -83974698 + AluJo SINE Alu 39 301 -11 252 281 176 8 chr17 1465178 1465311 -83973169 + MIR SINE MIR 32 190 -72 1951 122 0 14 chr17 1465393 1465680 -83972800 - AluSx SINE Alu -25 287 5 207 0 0 0 chr17 1466276 1466299 -83972181 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 288 350 53 78 chr17 1466350 1466787 -83971693 + L2 LINE L2 2827 3252 -20 2005 125 3 7 chr17 1466790 1467087 -83971393 - AluSx SINE Alu -16 296 1 356 266 176 38 chr17 1467276 1467543 -83970937 + L2 LINE L2 1698 2001 -1313 354 323 195 22 chr17 1467587 1468333 -83970147 + L2 LINE L2 2203 3082 -190 1116 184 94 15 chr17 1468358 1468621 -83969859 + MER1B DNA MER1_type 1 334 -5 2041 127 0 31 chr17 1468622 1468945 -83969535 + AluSq SINE Alu 1 313 0 315 320 0 0 chr17 1469045 1469123 -83969357 + L2 LINE L2 3194 3271 -1 272 133 17 0 chr17 1469474 1469534 -83968946 + (CA)n Simple_repeat Simple_repeat 2 62 0 2609 64 3 6 chr17 1470348 1470660 -83967820 + AluY SINE Alu 1 311 0 2138 68 0 0 chr17 1473471 1473737 -83964743 + AluY SINE Alu 1 266 -45 1934 152 0 0 chr17 1473881 1474170 -83964310 + AluJo SINE Alu 1 289 -23 2271 81 7 0 chr17 1474172 1474479 -83964001 + AluY SINE Alu 1 309 -2 228 269 0 13 chr17 1475430 1475508 -83962972 + G-rich Low_complexity Low_complexity 2 78 0 203 240 10 42 chr17 1475867 1475963 -83962517 + (CGAGG)n Simple_repeat Simple_repeat 2 94 0 2232 59 31 21 chr17 1476165 1476453 -83962027 - AluSx SINE Alu -21 291 1 977 89 0 41 chr17 1476539 1476685 -83961795 + AluSg/x SINE Alu 155 294 -16 593 299 48 51 chr17 1477301 1477595 -83960885 + HAL1 LINE L1 1116 1408 -1099 2452 79 7 3 chr17 1477605 1477909 -83960571 - AluSq SINE Alu -8 305 1 2082 104 17 3 chr17 1477946 1478235 -83960245 + AluSx SINE Alu 1 293 -19 2365 96 0 0 chr17 1478345 1478646 -83959834 + AluSx SINE Alu 1 301 -11 247 366 0 12 chr17 1479275 1479439 -83959041 + (TGG)n Simple_repeat Simple_repeat 1 162 0 235 264 64 16 chr17 1479986 1480111 -83958369 + L1M4 LINE L1 2873 3003 -3143 209 293 193 14 chr17 1480330 1480470 -83958010 + L2 LINE L2 2301 2465 -849 1692 117 144 4 chr17 1480487 1480743 -83957737 + AluSg1 SINE Alu 1 292 -17 2262 92 7 3 chr17 1480747 1481052 -83957428 + AluSq SINE Alu 1 306 0 807 170 0 0 chr17 1481052 1481173 -83957307 - AluJo SINE Alu -185 127 1 401 211 0 0 chr17 1482170 1482257 -83956223 - L1M3 LINE L1 -517 5639 5565 955 156 65 0 chr17 1482263 1482417 -83956063 - AluJb SINE Alu -148 164 1 1966 144 0 46 chr17 1482474 1482656 -83955824 - AluSx SINE Alu -1 311 149 2519 73 0 0 chr17 1482656 1482956 -83955524 - AluY SINE Alu -11 300 1 1966 144 0 46 chr17 1482956 1483099 -83955381 - AluSx SINE Alu -163 149 1 545 148 176 0 chr17 1483104 1483212 -83955268 - FRAM SINE Alu 0 176 50 1745 168 10 17 chr17 1483264 1483561 -83954919 + AluJb SINE Alu 1 295 -17 1872 175 0 28 chr17 1483838 1484158 -83954322 + AluJo SINE Alu 1 311 -1 420 240 124 46 chr17 1484159 1484225 -83954255 + L1ME4a LINE L1 5369 5428 -693 2237 109 0 0 chr17 1484225 1484518 -83953962 + AluY SINE Alu 2 294 -17 420 240 124 46 chr17 1484518 1484813 -83953667 + L1ME4a LINE L1 5428 5751 -370 830 215 80 6 chr17 1484838 1485001 -83953479 - FAM SINE Alu 0 175 1 2294 88 10 0 chr17 1485058 1485352 -83953128 + AluSx SINE Alu 1 297 -15 2298 106 10 0 chr17 1485364 1485665 -83952815 + AluSq SINE Alu 1 304 -9 241 267 33 33 chr17 1485795 1485915 -83952565 + L1ME4a LINE L1 6000 6119 -2 2252 114 0 7 chr17 1486078 1486212 -83952268 + AluSp SINE Alu 1 134 -179 2671 50 0 0 chr17 1486212 1486514 -83951966 + AluY SINE Alu 1 302 -9 2252 114 0 7 chr17 1486514 1486685 -83951795 + AluSp SINE Alu 134 304 -9 63 36 0 0 chr17 1486738 1486822 -83951658 + AT_rich Low_complexity Low_complexity 1 84 0 2474 74 3 0 chr17 1486872 1487170 -83951310 + AluSg SINE Alu 1 299 -11 199 302 78 35 chr17 1487659 1487775 -83950705 - MIR SINE MIR -32 230 110 188 135 27 0 chr17 1487887 1487924 -83950556 + (TA)n Simple_repeat Simple_repeat 1 38 0 1464 165 149 26 chr17 1487929 1488238 -83950242 + MER7A DNA MER2_type 1 345 -1 1111 117 29 133 chr17 1488458 1488508 -83949972 + AluSq SINE Alu 87 141 -172 1976 141 3 44 chr17 1488508 1488617 -83949863 + AluSx SINE Alu 4 116 -196 2092 76 10 45 chr17 1488617 1488932 -83949548 - AluY SINE Alu 0 305 1 1976 141 3 44 chr17 1488932 1489140 -83949340 + AluSx SINE Alu 116 309 -3 2338 66 0 13 chr17 1489140 1489444 -83949036 + AluY SINE Alu 1 300 -11 1111 117 29 133 chr17 1489444 1489632 -83948848 + AluSq SINE Alu 139 301 -12 194 309 62 0 chr17 1489641 1489722 -83948758 - L2 LINE L2 -775 2539 2454 2039 134 10 19 chr17 1490047 1490360 -83948120 - AluJb SINE Alu -2 310 1 2172 83 35 54 chr17 1490367 1490680 -83947800 - AluY SINE Alu -4 307 1 964 233 185 6 chr17 1490893 1491249 -83947231 + L2 LINE L2 2046 2465 -849 1199 153 42 0 chr17 1491302 1491491 -83946989 - AluJo SINE Alu -115 197 1 1173 258 132 53 chr17 1491493 1491722 -83946758 + L2 LINE L2 2466 2676 -637 2466 82 0 0 chr17 1491722 1492028 -83946452 - AluY SINE Alu -5 306 1 1173 258 132 53 chr17 1492028 1492162 -83946318 + L2 LINE L2 2676 2798 -515 2373 93 7 0 chr17 1492162 1492464 -83946016 - AluSg SINE Alu -6 304 1 2005 146 0 7 chr17 1492471 1492772 -83945708 - AluSx SINE Alu -13 299 1 1173 258 132 53 chr17 1492772 1493156 -83945324 + L2 LINE L2 2803 3313 0 2208 94 7 17 chr17 1493693 1493991 -83944489 - AluSg SINE Alu -15 295 1 889 138 15 0 chr17 1494009 1494139 -83944341 - FLAM_C SINE Alu -11 132 1 2389 58 0 52 chr17 1494413 1494722 -83943758 - AluY SINE Alu -14 297 5 1701 136 0 0 chr17 1494732 1494975 -83943505 - AluSq SINE Alu -70 243 1 904 224 5 14 chr17 1496881 1497091 -83941389 - MER6B DNA MER2_type -2 208 1 2353 96 0 3 chr17 1497519 1497821 -83940659 - AluSg SINE Alu -9 301 1 1050 142 0 0 chr17 1497832 1497987 -83940493 - AluSq SINE Alu -8 305 151 781 164 59 110 chr17 1498588 1498733 -83939747 - AluJo SINE Alu -62 250 99 2290 112 0 0 chr17 1498733 1499029 -83939451 + AluSq SINE Alu 1 296 -17 781 164 59 110 chr17 1499029 1499044 -83939436 - AluJo SINE Alu -213 99 85 1944 162 0 3 chr17 1499044 1499346 -83939134 + AluSx SINE Alu 1 301 -11 781 164 59 110 chr17 1499346 1499403 -83939077 - AluJo SINE Alu -227 85 43 273 307 81 25 chr17 1499423 1499706 -83938774 + L1ME4a LINE L1 5628 5926 -195 2159 112 31 0 chr17 1499879 1500173 -83938307 + AluSx SINE Alu 1 303 -9 813 109 23 62 chr17 1500175 1500303 -83938177 + AluSq/x SINE Alu 1 123 -189 1564 96 0 24 chr17 1500305 1500545 -83937935 + AluSg/x SINE Alu 94 312 0 2652 45 0 13 chr17 1500549 1500858 -83937622 + AluY SINE Alu 5 309 -2 239 147 0 0 chr17 1500921 1500955 -83937525 - Alu SINE Alu -94 39 6 2363 81 3 10 chr17 1501833 1502131 -83936349 - AluSp SINE Alu -17 296 1 2524 142 51 5 chr17 1503248 1503657 -83934823 + MSTA LTR MaLR 1 428 0 2587 67 0 3 chr17 1504465 1504777 -83933703 + AluY SINE Alu 1 311 0 185 347 51 20 chr17 1506135 1506233 -83932247 + L2 LINE L2 3199 3299 -14 195 291 36 0 chr17 1507104 1507159 -83931321 + L2 LINE L2 3200 3256 -16 21 0 0 0 chr17 1507357 1507378 -83931102 + AT_rich Low_complexity Low_complexity 1 21 0 213 94 0 0 chr17 1509449 1509481 -83928999 + (CGG)n Simple_repeat Simple_repeat 2 33 0 21 89 0 0 chr17 1509723 1509779 -83928701 + GC_rich Low_complexity Low_complexity 1 56 0 23 54 0 0 chr17 1509987 1510024 -83928456 + GC_rich Low_complexity Low_complexity 1 37 0 409 197 171 26 chr17 1510465 1510582 -83927898 + L2 LINE L2 3177 3310 -3 2262 86 0 0 chr17 1510702 1510981 -83927499 + AluSx SINE Alu 16 294 -18 2042 100 3 37 chr17 1511056 1511355 -83927125 + AluSg SINE Alu 1 289 -21 2135 70 56 7 chr17 1511355 1511640 -83926840 + AluY SINE Alu 1 300 -11 2174 82 43 4 chr17 1512035 1512315 -83926165 - AluSc SINE Alu -15 294 4 2401 57 0 13 chr17 1512502 1512803 -83925677 - AluY SINE Alu -13 298 2 1433 110 186 13 chr17 1513039 1513304 -83925176 - AluSg1 SINE Alu 0 306 1 1687 210 120 51 chr17 1513666 1514061 -83924419 + L1ME3A LINE L1 5512 5965 -205 2072 105 6 37 chr17 1514061 1514384 -83924096 + AluSq SINE Alu 1 313 0 1687 210 120 51 chr17 1514384 1514598 -83923882 + L1ME3A LINE L1 5965 6163 -7 2272 86 3 7 chr17 1514629 1514921 -83923559 + AluSx SINE Alu 1 291 -21 395 274 89 30 chr17 1515659 1515794 -83922686 + MER5B DNA MER1_type 1 143 -35 648 151 0 19 chr17 1515796 1515902 -83922578 - MER5A DNA MER1_type -1 188 85 449 301 24 48 chr17 1516477 1516686 -83921794 - L2 LINE L2 -2 3311 3108 525 255 123 19 chr17 1516710 1516922 -83921558 + MIR SINE MIR 22 255 -7 1108 44 7 15 chr17 1517150 1517286 -83921194 + AluSq/x SINE Alu 1 135 -178 2505 42 0 13 chr17 1517286 1517592 -83920888 + AluY SINE Alu 1 302 -9 295 238 69 30 chr17 1517593 1517694 -83920786 - Charlie8 DNA MER1_type -2312 105 1 1643 158 3 38 chr17 1518798 1519090 -83919390 + AluJo SINE Alu 1 282 -30 211 71 0 0 chr17 1519091 1519119 -83919361 + (TTTA)n Simple_repeat Simple_repeat 1 180 0 2158 94 0 14 chr17 1519119 1519405 -83919075 - AluSx SINE Alu -1 309 1 22 0 0 0 chr17 1519408 1519430 -83919050 + AT_rich Low_complexity Low_complexity 1 22 0 701 199 0 15 chr17 1519635 1519771 -83918709 - FLAM_A SINE Alu -1 141 8 434 132 92 0 chr17 1520328 1520404 -83918076 + FLAM SINE Alu 42 124 -19 256 237 129 11 chr17 1520572 1520665 -83917815 + MIR SINE MIR 17 120 -142 1660 117 11 25 chr17 1520766 1521075 -83917405 - AluJb SINE Alu 0 310 6 1993 119 3 7 chr17 1521110 1521403 -83917077 + AluSx SINE Alu 1 292 -20 605 196 110 83 chr17 1521497 1521798 -83916682 + L1MC5 LINE L1 7605 7913 -48 2348 60 0 10 chr17 1521809 1522110 -83916370 - AluY SINE Alu -13 298 1 991 111 7 0 chr17 1522110 1522245 -83916235 - AluSq/x SINE Alu -176 136 1 379 276 39 103 chr17 1522246 1522355 -83916125 - L2 LINE L2 -1635 1679 1591 2134 114 0 25 chr17 1522355 1522671 -83915809 + AluSx SINE Alu 5 312 0 379 276 39 103 chr17 1522671 1522793 -83915687 - L2 LINE L2 -1723 1591 1463 347 271 43 129 chr17 1522799 1523001 -83915479 - MIR SINE MIR -7 255 78 2134 99 0 7 chr17 1523001 1523293 -83915187 + AluSx SINE Alu 6 295 -17 347 271 43 129 chr17 1523293 1523345 -83915135 - MIR SINE MIR -184 78 23 965 145 12 18 chr17 1523678 1523844 -83914636 - AluSx SINE Alu -101 211 47 2682 19 0 6 chr17 1524805 1525118 -83913362 - AluY SINE Alu 0 311 1 419 290 93 52 chr17 1525453 1525527 -83912953 - L1MC4a LINE L1 -1633 6175 6106 1244 192 0 64 chr17 1525527 1525840 -83912640 + AluSx SINE Alu 1 293 -9 419 290 93 52 chr17 1525840 1525958 -83912522 - L1MC4a LINE L1 -1702 6106 5975 1787 174 13 7 chr17 1525965 1526270 -83912210 - AluJo SINE Alu -5 307 1 1006 68 8 8 chr17 1526280 1526412 -83912068 - AluY SINE Alu -179 132 1 500 301 130 17 chr17 1526415 1526836 -83911644 - L1MC4a LINE L1 -344 5822 5497 683 121 16 8 chr17 1529449 1529573 -83908907 + L1PB1 LINE L1 5742 5866 -285 2166 110 3 10 chr17 1529573 1529882 -83908598 - AluSq SINE Alu -6 307 1 1574 180 3 17 chr17 1530515 1530809 -83907671 + AluJb SINE Alu 1 290 -22 2175 87 0 13 chr17 1530954 1531265 -83907215 - AluY SINE Alu 0 311 5 1848 125 3 26 chr17 1532166 1532471 -83906009 + AluSx SINE Alu 4 301 -11 224 296 56 0 chr17 1532728 1532799 -83905681 - MIR3 SINE MIR -50 158 84 328 281 66 33 chr17 1532914 1533035 -83905445 + MIR SINE MIR 17 141 -67 2186 100 7 3 chr17 1537943 1538244 -83900236 - AluSg SINE Alu -8 302 1 285 383 14 16 chr17 1540215 1540365 -83898115 + MIR3 SINE MIR 4 136 -72 223 240 20 0 chr17 1541533 1541583 -83896897 + CT-rich Low_complexity Low_complexity 2 52 0 443 275 54 72 chr17 1543792 1544014 -83894466 + MIR SINE MIR 28 245 -17 248 309 74 9 chr17 1544195 1544303 -83894177 - MIR SINE MIR -60 148 33 190 369 16 41 chr17 1545926 1546048 -83892432 + MIR SINE MIR 83 201 -61 406 239 17 34 chr17 1546115 1546232 -83892248 + MIR SINE MIR 17 131 -77 1677 176 0 22 chr17 1546621 1546940 -83891540 + AluJb SINE Alu 1 312 0 2090 82 0 26 chr17 1549575 1549880 -83888600 + AluSg SINE Alu 1 297 -13 331 282 69 23 chr17 1550403 1550534 -83887946 - MER5B DNA MER1_type 0 178 42 668 172 0 83 chr17 1550537 1550682 -83887798 + FLAM_C SINE Alu 1 133 0 1510 131 173 19 chr17 1550691 1550951 -83887529 + AluSg SINE Alu 1 300 0 185 304 0 0 chr17 1550977 1551023 -83887457 + MER5B DNA MER1_type 131 176 -2 507 148 0 0 chr17 1551306 1551394 -83887086 + (CCCCAG)n Simple_repeat Simple_repeat 3 90 0 192 97 0 0 chr17 1554188 1554219 -83884261 + (CAGA)n Simple_repeat Simple_repeat 4 34 0 1302 186 45 11 chr17 1554219 1554488 -83883992 - AluJo SINE Alu -34 278 1 189 292 62 15 chr17 1555084 1555149 -83883331 + L2 LINE L2 3190 3257 -15 1992 91 0 24 chr17 1555312 1555609 -83882871 - AluSx SINE Alu -22 290 1 378 290 38 26 chr17 1556176 1556347 -83882133 + MIR SINE MIR 38 209 -53 360 64 0 0 chr17 1557083 1557130 -83881350 + (TG)n Simple_repeat Simple_repeat 2 48 0 212 194 11 86 chr17 1560003 1560096 -83878384 + G-rich Low_complexity Low_complexity 2 87 0 2264 100 3 3 chr17 1561818 1562128 -83876352 - AluSp SINE Alu -3 310 1 1372 187 98 32 chr17 1562908 1563224 -83875256 + MER1B DNA MER1_type 1 337 0 2059 79 0 26 chr17 1563567 1563870 -83874610 - AluSx SINE Alu -17 295 1 219 287 44 52 chr17 1564009 1564145 -83874335 - L3b LINE CR1 -134 1449 1315 620 157 8 60 chr17 1564388 1564522 -83873958 - FLAM_A SINE Alu -2 131 5 220 350 29 10 chr17 1564578 1564681 -83873799 + L2 LINE L2 2957 3061 -211 246 185 33 43 chr17 1566529 1566621 -83871859 + G-rich Low_complexity Low_complexity 6 96 0 259 75 0 25 chr17 1566883 1566923 -83871557 + (CA)n Simple_repeat Simple_repeat 1 39 0 308 297 0 43 chr17 1567834 1567972 -83870508 + G-rich Low_complexity Low_complexity 4 135 0 196 260 0 55 chr17 1568231 1568304 -83870176 - L2 LINE L2 -41 3272 3204 203 267 17 17 chr17 1568629 1568689 -83869791 - MIR SINE MIR -71 137 78 209 259 35 12 chr17 1571617 1571702 -83866778 + C-rich Low_complexity Low_complexity 6 92 0 23 68 0 0 chr17 1573425 1573469 -83865011 + GC_rich Low_complexity Low_complexity 1 44 0 205 154 0 58 chr17 1573660 1573712 -83864768 + CT-rich Low_complexity Low_complexity 1 49 0 22 35 0 0 chr17 1573796 1573825 -83864655 + GC_rich Low_complexity Low_complexity 1 29 0 26 74 0 0 chr17 1574825 1574879 -83863601 + GC_rich Low_complexity Low_complexity 1 54 0 280 206 44 21 chr17 1575000 1575087 -83863393 - MIR SINE MIR -57 151 87 307 246 0 14 chr17 1576137 1576206 -83862274 + Tigger5 DNA MER2_type 1 68 -2255 2069 91 0 86 chr17 1576752 1577091 -83861389 + AluSx SINE Alu 1 310 -2 2455 84 0 7 chr17 1577439 1577747 -83860733 - AluSx SINE Alu -6 306 1 237 219 31 47 chr17 1578314 1578378 -83860102 - L2 LINE L2 -4 3268 3206 872 220 162 24 chr17 1578563 1578859 -83859621 - MER2 DNA MER2_type -8 337 1 782 147 7 29 chr17 1579146 1579282 -83859198 + FLAM_A SINE Alu 1 133 0 384 285 134 26 chr17 1580588 1580812 -83857668 + L1M4 LINE L1 2915 3113 -3033 2135 89 0 71 chr17 1580812 1581148 -83857332 + AluSx SINE Alu 1 312 0 2398 82 0 0 chr17 1581154 1581448 -83857032 + AluSg SINE Alu 1 294 -16 2752 22 0 16 chr17 1581457 1581773 -83856707 + AluY SINE Alu 1 311 0 384 285 134 26 chr17 1581773 1581822 -83856658 + L1M4 LINE L1 3124 5201 -945 542 319 65 56 chr17 1582847 1583121 -83855359 - L1ME4a LINE L1 -95 6026 5756 2477 53 0 30 chr17 1583121 1583425 -83855055 - AluY SINE Alu -16 295 1 1971 125 20 16 chr17 1583425 1583596 -83854884 - AluSx SINE Alu -7 305 130 210 37 0 0 chr17 1583596 1583623 -83854857 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1971 125 20 16 chr17 1583623 1583754 -83854726 - AluSx SINE Alu -182 130 1 542 319 65 56 chr17 1583754 1584048 -83854432 - L1ME4a LINE L1 -364 5757 5452 354 72 0 119 chr17 1584349 1584441 -83854039 - Alu SINE Alu -241 61 1 774 179 0 21 chr17 1584459 1584604 -83853876 - FLAM_C SINE Alu 0 143 2 1379 182 104 7 chr17 1584779 1584915 -83853565 + AluSx SINE Alu 1 122 -190 2383 99 7 0 chr17 1584915 1585218 -83853262 + AluSq SINE Alu 1 305 -8 1379 182 104 7 chr17 1585218 1585350 -83853130 + AluSx SINE Alu 122 295 -17 277 139 0 0 chr17 1585539 1585582 -83852898 + Alu SINE Alu 249 291 -11 202 292 0 0 chr17 1585634 1585682 -83852798 + L2 LINE L2 3223 3270 -2 2028 156 20 0 chr17 1585711 1586012 -83852468 + AluSx SINE Alu 1 307 -5 2375 103 0 0 chr17 1586012 1586323 -83852157 + AluSx SINE Alu 1 311 -1 715 155 69 27 chr17 1586333 1586569 -83851911 - MSTD LTR MaLR -19 371 87 2023 133 14 3 chr17 1586743 1587037 -83851443 - AluSx SINE Alu -15 297 1 2816 214 8 34 chr17 1587127 1587743 -83850737 + MER82 DNA MER2_type 2 601 -52 1670 167 47 7 chr17 1587743 1588019 -83850461 + AluJb SINE Alu 1 287 -25 1108 142 0 11 chr17 1588209 1588385 -83850095 + AluSg/x SINE Alu 139 312 0 480 260 115 35 chr17 1588401 1588601 -83849879 + MIR SINE MIR 20 235 -27 1036 240 67 6 chr17 1588712 1589054 -83849426 + L1MC/D LINE L1 4902 5264 -882 915 138 0 36 chr17 1589054 1589192 -83849288 + AluSq/x SINE Alu 1 133 -180 671 198 35 108 chr17 1589198 1589352 -83849128 + L1MC/D LINE L1 5319 5448 -911 1988 73 84 15 chr17 1589352 1589626 -83848854 + AluY SINE Alu 1 293 -18 671 198 35 108 chr17 1589626 1589729 -83848751 + L1MC/D LINE L1 5448 5557 -802 273 107 321 0 chr17 1589835 1589891 -83848589 + Tigger1 DNA MER2_type 159 232 -2186 803 138 32 0 chr17 1589934 1590057 -83848423 + FRAM SINE Alu 36 162 -14 1694 95 5 5 chr17 1590057 1590279 -83848201 + AluSc SINE Alu 1 222 -87 1391 122 54 71 chr17 1590281 1590407 -83848073 + Tigger1 DNA MER2_type 1454 1581 -837 1528 175 74 7 chr17 1590407 1590692 -83847788 + AluJb SINE Alu 1 304 -8 1391 122 54 71 chr17 1590692 1590754 -83847726 + Tigger1 DNA MER2_type 1581 1643 -775 2382 99 0 0 chr17 1590754 1591057 -83847423 + AluSg SINE Alu 1 303 -7 1391 122 54 71 chr17 1591057 1591163 -83847317 + Tigger1 DNA MER2_type 1643 1744 -674 2202 115 6 13 chr17 1591166 1591453 -83847027 + AluSx SINE Alu 1 287 -25 183 80 0 0 chr17 1591453 1591478 -83847002 + (CA)n Simple_repeat Simple_repeat 2 26 0 2202 115 6 13 chr17 1591478 1591503 -83846977 + AluSx SINE Alu 287 311 -1 1194 97 0 0 chr17 1591736 1591891 -83846589 + AluSg/x SINE Alu 150 304 -8 1350 124 0 10 chr17 1592043 1592244 -83846236 - MER1B DNA MER1_type 0 339 141 2297 92 10 3 chr17 1592688 1592994 -83845486 - AluY SINE Alu -3 308 1 519 103 23 11 chr17 1593010 1593097 -83845383 - AluY SINE Alu -180 131 44 1256 138 0 6 chr17 1593354 1593535 -83844945 + AluSg/x SINE Alu 126 305 -5 21 0 0 0 chr17 1593600 1593621 -83844859 + AT_rich Low_complexity Low_complexity 1 21 0 194 269 128 26 chr17 1594259 1594337 -83844143 + MIR SINE MIR 106 191 -71 396 274 30 90 chr17 1595371 1595446 -83843034 + MER5A DNA MER1_type 1 79 -110 2357 113 0 0 chr17 1595446 1595748 -83842732 + AluSp SINE Alu 1 302 -11 2356 96 7 0 chr17 1595758 1596060 -83842420 + AluSg SINE Alu 1 304 -6 396 274 30 90 chr17 1596060 1596174 -83842306 + MER5A DNA MER1_type 88 189 0 326 312 46 0 chr17 1596336 1596445 -83842035 + L1MC/D LINE L1 5703 5816 -1992 1965 118 0 58 chr17 1596457 1596770 -83841710 + AluJb SINE Alu 3 297 -15 1740 86 52 0 chr17 1596774 1597007 -83841473 + AluY SINE Alu 1 245 -66 1470 115 0 5 chr17 1597107 1597307 -83841173 + AluSg/x SINE Alu 104 302 -10 2211 93 4 4 chr17 1597314 1597642 -83840838 + AluSc SINE Alu 1 328 0 1806 129 0 0 chr17 1598076 1598316 -83840164 + AluSx SINE Alu 52 291 -21 662 208 120 5 chr17 1598327 1598519 -83839961 + L1ME1 LINE L1 5742 5955 -211 1936 177 0 0 chr17 1598519 1598813 -83839667 + AluJb SINE Alu 1 294 -18 2385 65 24 0 chr17 1598956 1599246 -83839234 - AluY SINE Alu -14 297 1 2327 123 0 0 chr17 1599246 1599554 -83838926 - AluSx SINE Alu -4 308 1 933 277 89 48 chr17 1599560 1599881 -83838599 - HAL1 LINE L1 0 2507 2201 2348 86 3 10 chr17 1599881 1600184 -83838296 - AluSp SINE Alu -12 301 1 933 277 89 48 chr17 1600184 1600544 -83837936 - HAL1 LINE L1 -306 2201 1798 341 245 126 7 chr17 1600584 1600727 -83837753 - L1ME4a LINE L1 -16 6105 5946 234 123 70 18 chr17 1601036 1601093 -83837387 - MER3 DNA MER1_type -7 202 143 2173 113 0 36 chr17 1601093 1601402 -83837078 - AluSq SINE Alu -15 298 1 1741 122 0 4 chr17 1601404 1601641 -83836839 - AluSx SINE Alu -23 289 54 977 118 24 18 chr17 1601754 1601924 -83836556 + L1MB4 LINE L1 6009 6179 -1 1708 159 0 53 chr17 1602059 1602391 -83836089 - AluJo SINE Alu 0 316 1 31 26 0 0 chr17 1602655 1602693 -83835787 + AT_rich Low_complexity Low_complexity 1 38 0 204 294 165 0 chr17 1602785 1602894 -83835586 + L2 LINE L2 2442 2568 -746 1080 178 146 66 chr17 1602922 1603209 -83835271 - AluJo SINE Alu 0 312 3 332 310 103 54 chr17 1603211 1603472 -83835008 + L2 LINE L2 2616 2889 -425 975 68 0 0 chr17 1603493 1603611 -83834869 - AluSc SINE Alu -17 292 175 290 279 52 64 chr17 1603615 1603787 -83834693 + L2 LINE L2 2941 3110 -162 1086 122 6 6 chr17 1604265 1604421 -83834059 + AluSq SINE Alu 1 156 -157 500 115 35 35 chr17 1604425 1604512 -83833968 - L1M3 LINE L1 -514 5669 5583 269 211 146 89 chr17 1604620 1604743 -83833737 + MLT1I LTR MaLR 48 177 -232 209 179 0 90 chr17 1604940 1605007 -83833473 + T-rich Low_complexity Low_complexity 1 61 0 1546 142 0 0 chr17 1605322 1605534 -83832946 - AluJb SINE Alu -6 306 95 427 133 0 0 chr17 1605540 1605600 -83832880 - AluJb SINE Alu -158 154 95 970 164 0 31 chr17 1605606 1605765 -83832715 - AluJo SINE Alu -158 154 1 696 126 0 0 chr17 1606158 1606261 -83832219 - AluSg/x SINE Alu -11 299 197 596 174 0 37 chr17 1606260 1606369 -83832111 + AluJb SINE Alu 202 306 -6 * 2134 126 10 3 chr17 1606462 1606763 -83831717 - AluSq SINE Alu -7 306 4 2163 97 0 7 chr17 1607441 1607748 -83830732 - AluSx SINE Alu 0 312 22 1008 116 123 0 chr17 1607848 1607994 -83830486 - AluSq SINE Alu -149 164 1 475 270 32 0 chr17 1608005 1608160 -83830320 + L1MC/D LINE L1 5649 5811 -330 1737 79 0 0 chr17 1608166 1608381 -83830099 - AluY SINE Alu -2 309 95 1200 66 0 26 chr17 1608382 1608533 -83829947 - AluY SINE Alu -164 147 1 2370 87 3 7 chr17 1608533 1608833 -83829647 - AluSq SINE Alu -14 299 1 1307 128 0 0 chr17 1610239 1610419 -83828061 - AluSg/x SINE Alu 0 312 133 674 181 60 15 chr17 1610419 1610552 -83827928 + AluJo SINE Alu 14 152 -160 2092 114 3 11 chr17 1610654 1611005 -83827475 - L1PBa LINE L1 -4103 2760 2413 1603 92 9 0 chr17 1611005 1611234 -83827246 + THE1A LTR MaLR 125 355 0 1308 137 15 5 chr17 1611237 1611441 -83827039 + AluJb SINE Alu 107 312 0 1414 121 7 0 chr17 1611669 1611923 -83826557 + L1PA13 LINE L1 5845 6149 -14 2250 103 0 7 chr17 1612183 1612473 -83826007 - AluSc SINE Alu -21 288 1 1144 222 4 50 chr17 1613006 1613267 -83825213 + AluJo SINE Alu 43 291 -21 183 361 21 0 chr17 1613303 1613400 -83825080 + MIR SINE MIR 108 206 -56 950 145 47 47 chr17 1613526 1613698 -83824782 + AluJb SINE Alu 1 172 -140 533 495 55 24 chr17 1613736 1614025 -83824455 + AluJb SINE Alu 2 299 -3 2017 156 0 7 chr17 1614134 1614442 -83824038 + AluJb SINE Alu 1 306 -6 363 23 0 0 chr17 1614626 1614670 -83823810 + (TG)n Simple_repeat Simple_repeat 2 45 0 1309 52 0 0 chr17 1614681 1614834 -83823646 - AluY SINE Alu -7 304 152 403 82 0 0 chr17 1614834 1614883 -83823597 - Alu SINE Alu -261 50 2 2367 96 0 3 chr17 1615250 1615551 -83822929 - AluSg SINE Alu -10 300 1 2086 101 3 18 chr17 1616407 1616720 -83821760 - AluSq SINE Alu 0 312 4 1525 116 4 42 chr17 1616923 1617164 -83821316 + AluSg/x SINE Alu 71 302 -8 2385 91 0 0 chr17 1617491 1617789 -83820691 - AluSx SINE Alu -13 299 2 1037 152 0 43 chr17 1617809 1617993 -83820487 - AluSg/x SINE Alu 0 312 137 1863 163 27 3 chr17 1618000 1618300 -83820180 - AluJo SINE Alu -5 307 1 346 320 8 40 chr17 1618778 1618903 -83819577 + MIR3 SINE MIR 41 161 -47 2261 109 10 3 chr17 1618946 1619250 -83819230 + AluSx SINE Alu 1 306 -6 316 125 0 0 chr17 1619667 1619723 -83818757 - Alu SINE Alu 0 301 246 351 284 24 16 chr17 1619915 1620042 -83818438 - MLT1L LTR MaLR -2 613 486 314 54 0 0 chr17 1620246 1620283 -83818197 + U2 snRNA snRNA 1 37 -151 2146 97 18 0 chr17 1620362 1620661 -83817819 + AluY SINE Alu 1 284 -27 190 0 0 0 chr17 1620486 1620707 -83817773 + (CA)n Simple_repeat Simple_repeat 2 222 0 1825 114 11 7 chr17 1620707 1620988 -83817492 + AluSq SINE Alu 1 282 -31 757 122 28 0 chr17 1621034 1621141 -83817339 - FLAM_C SINE Alu -32 111 2 710 249 152 91 chr17 1621384 1621866 -83816614 - MLT1H LTR MaLR 0 549 39 1135 147 0 0 chr17 1621882 1622059 -83816421 + AluSg/x SINE Alu 136 312 0 826 78 5 63 chr17 1622479 1622670 -83815810 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 2065 125 3 0 chr17 1622670 1623005 -83815475 - AluSp SINE Alu 0 336 1 24 0 0 0 chr17 1623141 1623165 -83815315 + AT_rich Low_complexity Low_complexity 1 24 0 1964 129 3 10 chr17 1623235 1623530 -83814950 - AluSx SINE Alu -19 293 1 1747 141 7 11 chr17 1623619 1623931 -83814549 - AluSg SINE Alu 0 311 1 675 167 0 111 chr17 1623931 1623943 -83814537 - AluJo SINE Alu -167 145 133 1873 138 0 7 chr17 1623943 1624240 -83814240 - AluSq SINE Alu -18 295 1 675 167 0 111 chr17 1624240 1624389 -83814091 - AluJo SINE Alu -179 133 2 320 314 95 57 chr17 1624932 1625228 -83813252 + L2 LINE L2 2449 2755 -559 392 171 49 12 chr17 1625240 1625322 -83813158 - MIR SINE MIR -5 257 173 316 271 0 24 chr17 1625351 1625436 -83813044 - MIR SINE MIR -178 84 2 1091 314 31 110 chr17 1625665 1625837 -83812643 - AluJo SINE Alu -9 293 156 2245 94 0 3 chr17 1625837 1626135 -83812345 + AluSq SINE Alu 1 297 -16 1091 314 31 110 chr17 1626135 1626280 -83812200 - AluJo SINE Alu -146 156 1 1854 107 21 24 chr17 1626848 1627137 -83811343 + AluSx SINE Alu 2 289 -23 25 31 0 0 chr17 1627141 1627173 -83811307 + AT_rich Low_complexity Low_complexity 1 32 0 325 202 0 138 chr17 1627176 1627285 -83811195 + L1MC4 LINE L1 6615 6708 -1334 298 217 24 36 chr17 1627292 1627543 -83810937 + (TATATG)n Simple_repeat Simple_repeat 1 248 0 2324 87 3 0 chr17 1628551 1628863 -83809617 - AluSp SINE Alu 0 313 1 304 219 144 53 chr17 1629290 1629477 -83809003 - L1MC5 LINE L1 -182 7779 7576 23 0 0 0 chr17 1629502 1629525 -83808955 + AT_rich Low_complexity Low_complexity 1 23 0 1362 97 10 0 chr17 1629616 1629811 -83808669 - AluSp SINE Alu 0 313 117 249 368 34 8 chr17 1630009 1630051 -83808429 - L2 LINE L2 -237 3035 2996 1844 113 17 14 chr17 1630051 1630342 -83808138 + AluSx SINE Alu 1 292 -20 249 368 34 8 chr17 1630342 1630416 -83808064 - L2 LINE L2 -276 2996 2916 391 179 13 13 chr17 1631310 1631388 -83807092 + MIR SINE MIR 184 261 -1 430 340 32 6 chr17 1631597 1631753 -83806727 - MIR SINE MIR -75 187 28 1884 126 41 0 chr17 1631883 1632176 -83806304 - AluSq SINE Alu -8 305 1 2289 83 0 16 chr17 1632333 1632646 -83805834 - AluY SINE Alu -3 308 1 1909 128 3 13 chr17 1632691 1632997 -83805483 - AluSc SINE Alu -6 303 1 2030 135 3 6 chr17 1632997 1633308 -83805172 - AluSx SINE Alu -2 310 1 794 96 35 9 chr17 1633742 1633857 -83804623 + AluJb SINE Alu 1 118 -194 1031 141 0 70 chr17 1633879 1633990 -83804490 + Tigger6 DNA MER2_type 1423 1540 -57 2035 94 33 0 chr17 1633990 1634289 -83804191 + AluY SINE Alu 1 309 -2 2060 112 37 0 chr17 1634289 1634584 -83803896 + AluSg SINE Alu 1 306 -4 1031 141 0 70 chr17 1634584 1634656 -83803824 + Tigger6 DNA MER2_type 1538 1594 -3 * 1586 244 99 46 chr17 1634656 1635151 -83803329 - MLT2F LTR ERVL -98 565 45 444 299 62 17 chr17 1635187 1635364 -83803116 + MIR SINE MIR 1 185 -77 2219 96 3 0 chr17 1635393 1635705 -83802775 - AluSp SINE Alu 0 313 1 1851 152 3 10 chr17 1635849 1636158 -83802322 + AluJo SINE Alu 1 307 -5 298 287 10 30 chr17 1636195 1636296 -83802184 + MIR SINE MIR 98 196 -66 512 141 41 50 chr17 1636474 1636595 -83801885 + L1MC3 LINE L1 7665 7784 -1 808 153 79 95 chr17 1636615 1636736 -83801744 - MER5A DNA MER1_type -2 187 69 2097 100 3 0 chr17 1636736 1637026 -83801454 - AluSg SINE Alu -19 291 1 808 153 79 95 chr17 1637026 1637094 -83801386 - MER5A DNA MER1_type -120 69 1 205 190 52 0 chr17 1637359 1637417 -83801063 + (TA)n Simple_repeat Simple_repeat 1 61 0 1507 139 4 8 chr17 1637424 1637661 -83800819 + MER46A DNA MER2_type 1 236 0 1870 142 3 7 chr17 1637677 1637972 -83800508 + AluJb SINE Alu 1 294 -18 24 0 0 0 chr17 1637972 1637996 -83800484 + AT_rich Low_complexity Low_complexity 1 24 0 816 189 9 108 chr17 1638113 1638266 -83800214 - L1M3 LINE L1 -541 5639 5472 755 208 0 0 chr17 1638266 1638396 -83800084 - FLAM_C SINE Alu -2 131 2 2064 125 0 3 chr17 1638402 1638706 -83799774 - AluSq SINE Alu -10 303 1 1939 141 0 13 chr17 1638707 1639052 -83799428 - AluSx SINE Alu 0 312 8 816 189 9 108 chr17 1639052 1639101 -83799379 - L1M3 LINE L1 -712 5468 5449 1622 173 3 14 chr17 1639336 1639631 -83798849 + AluJo SINE Alu 3 294 -18 536 264 8 8 chr17 1639643 1639772 -83798708 - L2 LINE L2 -3 3310 3182 1407 246 28 39 chr17 1639841 1640203 -83798277 + MLT1J LTR MaLR 3 360 -151 1306 193 30 43 chr17 1640212 1640513 -83797967 + AluJo SINE Alu 12 308 -4 199 109 0 43 chr17 1640525 1640571 -83797909 + (GAA)n Simple_repeat Simple_repeat 2 45 0 719 105 0 0 chr17 1640613 1640708 -83797772 - 7SLRNA srpRNA srpRNA -11 309 215 2309 90 6 0 chr17 1640708 1641019 -83797461 - AluSp SINE Alu 0 313 1 1614 111 4 0 chr17 1641019 1641244 -83797236 - 7SLRNA srpRNA srpRNA -93 227 1 266 253 0 13 chr17 1641249 1641324 -83797156 + MLT1J LTR MaLR 412 485 -26 229 268 237 0 chr17 1641384 1641481 -83796999 - L2 LINE L2 -223 3049 2930 977 90 0 8 chr17 1641586 1641720 -83796760 - AluSq/x SINE Alu -179 133 1 1551 173 3 26 chr17 1642512 1642648 -83795832 + AluJo SINE Alu 1 139 -173 2110 109 3 0 chr17 1642648 1642942 -83795538 + AluSg SINE Alu 1 295 -15 2377 59 3 13 chr17 1642944 1643251 -83795229 + AluY SINE Alu 1 304 -7 1551 173 3 26 chr17 1643251 1643418 -83795062 + AluJo SINE Alu 140 300 -12 2213 84 3 3 chr17 1643460 1643757 -83794723 + AluSq SINE Alu 1 297 -16 1426 176 97 38 chr17 1644034 1644374 -83794106 + LTR2B LTR ERV1 32 391 -99 867 45 0 0 chr17 1644392 1644502 -83793978 - SVA Other Other -1 1385 1276 563 136 2 0 chr17 1644504 1644598 -83793882 + LTR2B LTR ERV1 355 490 0 1073 151 0 0 chr17 1644599 1644765 -83793715 - AluSg/x SINE Alu -13 297 132 1520 93 9 0 chr17 1644765 1644979 -83793501 - AluSq SINE Alu -11 302 87 1003 167 0 22 chr17 1645082 1645262 -83793218 + AluSg/x SINE Alu 119 294 -16 1767 168 3 0 chr17 1645323 1645621 -83792859 - AluJb SINE Alu -13 299 1 338 287 103 51 chr17 1645621 1645952 -83792528 + HAL1 LINE L1 25 372 -2135 1933 123 0 16 chr17 1645955 1646264 -83792216 + AluSc SINE Alu 1 304 -5 430 284 83 33 chr17 1646265 1646583 -83791897 + L1MC/D LINE L1 5386 5714 -448 2073 79 7 4 chr17 1646714 1647028 -83791452 + AluSx SINE Alu 1 315 0 233 151 0 38 chr17 1647112 1647140 -83791340 + A-rich Low_complexity Low_complexity 5 32 -23 2296 86 3 3 chr17 1647140 1647453 -83791027 + AluSq SINE Alu 1 313 0 233 151 0 38 chr17 1647453 1647477 -83791003 + A-rich Low_complexity Low_complexity 32 55 0 415 327 35 39 chr17 1647698 1647952 -83790528 + L1M4 LINE L1 4582 4834 -1312 2075 124 0 6 chr17 1647997 1648311 -83790169 + AluSx SINE Alu 1 312 0 1257 102 0 0 chr17 1648311 1648478 -83790002 + AluSq SINE Alu 133 299 -14 974 174 11 16 chr17 1648601 1648791 -83789689 + AluJo SINE Alu 92 280 -32 614 325 13 21 chr17 1648811 1649045 -83789435 + MIR SINE MIR 31 262 0 612 215 23 8 chr17 1649229 1649359 -83789121 - AluSg/x SINE Alu -17 295 164 1263 113 5 5 chr17 1649361 1649547 -83788933 - AluSg/x SINE Alu -8 302 117 2018 119 10 10 chr17 1649663 1649965 -83788515 - AluSx SINE Alu -10 302 1 912 133 20 137 chr17 1650025 1650280 -83788200 + AluJb SINE Alu 87 311 -1 395 129 48 0 chr17 1650600 1650662 -83787818 - AluS SINE Alu -12 289 225 681 158 0 0 chr17 1650662 1650763 -83787717 - AluS SINE Alu -212 101 1 8118 127 143 38 chr17 1650812 1652367 -83786113 - pTR5 LTR ERV1 0 2438 589 999 94 0 0 chr17 1652497 1652624 -83785856 - FLAM_C SINE Alu -6 127 1 272 274 0 0 chr17 1652716 1652778 -83785702 - MIR3 SINE MIR -33 175 114 395 218 118 9 chr17 1652784 1652894 -83785586 - L1M4 LINE L1 -2553 3593 3472 1195 131 4 79 chr17 1653038 1653267 -83785213 + AluSx SINE Alu 1 212 -100 1007 104 0 146 chr17 1653367 1653579 -83784901 + AluJb SINE Alu 125 305 -7 517 348 146 29 chr17 1653588 1654274 -83784206 - L2 LINE L2 -727 2587 1822 1640 152 14 18 chr17 1654274 1654589 -83783891 + AluJo SINE Alu 1 314 0 1529 177 29 35 chr17 1654646 1654827 -83783653 + L1MB2 LINE L1 5651 5832 -339 2167 81 0 37 chr17 1654827 1655150 -83783330 + AluSx SINE Alu 1 311 -1 1529 177 29 35 chr17 1655150 1655395 -83783085 + L1MB2 LINE L1 5832 6171 0 622 164 95 0 chr17 1655667 1655783 -83782697 - FLAM_C SINE Alu 0 143 17 1200 103 0 0 chr17 1655925 1656090 -83782390 + AluSq SINE Alu 1 165 -148 1413 77 31 15 chr17 1656106 1656302 -83782178 + AluSg/x SINE Alu 99 297 -13 377 260 46 51 chr17 1656412 1656608 -83781872 + L1MC4a LINE L1 5711 5905 -1903 2381 66 0 0 chr17 1658146 1658449 -83780031 + AluY SINE Alu 1 303 -8 22 0 0 0 chr17 1658453 1658475 -83780005 + AT_rich Low_complexity Low_complexity 1 22 0 2401 42 0 0 chr17 1658482 1658788 -83779692 + AluY SINE Alu 1 306 0 263 273 68 45 chr17 1659052 1659162 -83779318 - MIR SINE MIR -78 184 69 2145 94 0 25 chr17 1659162 1659480 -83779000 + AluSg SINE Alu 1 310 0 263 273 68 45 chr17 1659480 1659501 -83778979 - MIR SINE MIR -193 69 50 378 183 16 0 chr17 1659765 1659850 -83778630 - L1P3 LINE L1 -402 5752 5664 442 188 20 2 chr17 1659866 1660117 -83778363 + AluJo SINE Alu 1 295 -17 636 250 152 62 chr17 1660364 1660520 -83777960 + Charlie8 DNA MER1_type 63 204 -2213 691 179 0 15 chr17 1660520 1660654 -83777826 - FLAM_C SINE Alu 0 133 2 636 250 152 62 chr17 1660654 1660865 -83777615 + Charlie8 DNA MER1_type 204 463 -1954 2312 55 3 0 chr17 1660865 1661155 -83777325 - AluSg SINE Alu -19 291 1 1743 161 3 0 chr17 1661184 1661469 -83777011 - AluSx SINE Alu -26 286 1 1243 88 83 6 chr17 1661875 1662056 -83776424 + MER30 DNA MER1_type 1 195 -35 2274 99 0 16 chr17 1662533 1662846 -83775634 + AluSg SINE Alu 1 308 -2 2077 94 17 14 chr17 1663556 1663853 -83774627 - AluSx SINE Alu -14 298 1 193 263 0 0 chr17 1663855 1663893 -83774587 - MIR SINE MIR -78 184 147 318 219 113 86 chr17 1663928 1663966 -83774514 + MER58B DNA MER1_type 4 40 -301 1495 159 21 10 chr17 1663966 1664255 -83774225 - AluJb SINE Alu -20 292 1 318 219 113 86 chr17 1664255 1664367 -83774113 + MER58B DNA MER1_type 40 158 -183 28 29 0 0 chr17 1664371 1664406 -83774074 + AT_rich Low_complexity Low_complexity 1 35 0 298 85 85 0 chr17 1664408 1664455 -83774025 + MER58B DNA MER1_type 150 200 -141 180 0 0 0 chr17 1664495 1664515 -83773965 + (TTTTTG)n Simple_repeat Simple_repeat 4 23 0 21 36 0 0 chr17 1665336 1665364 -83773116 + AT_rich Low_complexity Low_complexity 1 28 0 1620 143 24 14 chr17 1665367 1665654 -83772826 - AluJo SINE Alu -9 303 14 525 173 136 0 chr17 1665675 1665785 -83772695 + MER58B DNA MER1_type 217 341 0 1222 192 4 54 chr17 1665951 1666211 -83772269 - AluJo SINE Alu -43 269 23 1739 115 64 3 chr17 1666336 1666632 -83771848 - MER2 DNA MER2_type 0 345 32 2155 103 0 0 chr17 1666784 1667084 -83771396 - AluSg SINE Alu -10 300 1 2166 154 26 48 chr17 1667650 1668065 -83770415 - MLT2D LTR ERVL -8 406 1 2305 53 0 33 chr17 1668127 1668427 -83770053 + AluY SINE Alu 1 290 -21 1830 120 0 37 chr17 1668981 1669280 -83769200 + AluSx SINE Alu 1 288 -24 2078 97 0 7 chr17 1669312 1669601 -83768879 + AluSg SINE Alu 1 287 -23 560 178 0 0 chr17 1669940 1670041 -83768439 + AluSg/x SINE Alu 201 301 -8 2263 85 3 13 chr17 1670307 1670614 -83767866 + AluSx SINE Alu 1 312 0 1593 169 3 3 chr17 1671356 1671646 -83766834 - AluJb SINE Alu -22 290 1 1314 189 13 60 chr17 1671648 1671807 -83766673 - AluJo SINE Alu -14 288 148 1987 125 7 7 chr17 1671807 1672112 -83766368 - AluSx SINE Alu -7 305 1 1314 189 13 60 chr17 1672112 1672253 -83766227 - AluJo SINE Alu -154 148 2 544 126 0 172 chr17 1672265 1672416 -83766064 - FLAM_C SINE Alu -7 126 2 374 247 96 48 chr17 1672504 1672670 -83765810 - MIR SINE MIR -48 214 41 2355 70 0 6 chr17 1672899 1673212 -83765268 + AluY SINE Alu 1 311 0 1394 57 0 0 chr17 1673212 1673388 -83765092 + AluSg/x SINE Alu 132 307 -2 23 33 0 0 chr17 1674050 1674080 -83764400 + GC_rich Low_complexity Low_complexity 1 30 0 252 0 0 0 chr17 1674141 1674169 -83764311 + (CGG)n Simple_repeat Simple_repeat 2 29 0 285 102 51 0 chr17 1674438 1674497 -83763983 + CT-rich Low_complexity Low_complexity 1 62 0 237 200 31 15 chr17 1674656 1674721 -83763759 + CT-rich Low_complexity Low_complexity 2 67 0 26 0 0 0 chr17 1676709 1676735 -83761745 + AT_rich Low_complexity Low_complexity 1 26 0 623 284 72 32 chr17 1676793 1677031 -83761449 - MIR SINE MIR -1 261 18 694 240 147 62 chr17 1677252 1677444 -83761036 + MLT1H LTR MaLR 30 204 -345 2029 88 13 42 chr17 1677444 1677751 -83760729 + AluSq SINE Alu 1 298 -15 694 240 147 62 chr17 1677751 1677988 -83760492 + MLT1H LTR MaLR 204 533 -16 2457 54 0 0 chr17 1678143 1678441 -83760039 - AluSx SINE Alu -14 298 1 570 253 112 0 chr17 1679699 1679877 -83758603 - L2 LINE L2 -5 3308 3111 1000 199 23 14 chr17 1679880 1680096 -83758384 + AluJo SINE Alu 87 304 -8 966 151 37 55 chr17 1680392 1680610 -83757870 + L1MA4A LINE L1 6086 6299 -4 1374 126 36 138 chr17 1680665 1680830 -83757650 - AluJo SINE Alu 0 302 187 1914 103 3 72 chr17 1680830 1681150 -83757330 - AluSx SINE Alu -14 298 1 1374 126 36 138 chr17 1681150 1681318 -83757162 - AluJo SINE Alu -115 187 3 781 311 138 26 chr17 1681797 1682456 -83756024 - L2 LINE L2 -339 2975 2243 6453 65 13 41 chr17 1682619 1683595 -83754885 - SVA Other Other -5 1381 433 5414 72 24 15 chr17 1683639 1684436 -83754044 - SVA Other Other -518 868 65 225 143 54 18 chr17 1684549 1684605 -83753875 - L1M4 LINE L1 -382 5802 5745 353 231 132 52 chr17 1684609 1684836 -83753644 - L1MB7 LINE L1 -317 5867 5658 334 251 110 64 chr17 1684824 1685043 -83753437 - L1MB7 LINE L1 -314 5870 5642 * 2297 163 38 57 chr17 1685051 1685574 -83752906 - L1MB4 LINE L1 -325 5855 5343 1997 86 3 58 chr17 1685653 1685966 -83752514 - AluSq SINE Alu -17 296 1 486 307 7 7 chr17 1686220 1686357 -83752123 + MIR3 SINE MIR 47 183 -25 2262 95 0 0 chr17 1686481 1686777 -83751703 - AluSg SINE Alu -14 296 1 1267 216 36 16 chr17 1686897 1687202 -83751278 - AluJo SINE Alu -1 311 1 2088 114 19 0 chr17 1687212 1687519 -83750961 - AluSq SINE Alu 0 313 1 2240 92 0 16 chr17 1687773 1688088 -83750392 + AluSx SINE Alu 1 310 -2 1626 155 4 4 chr17 1688335 1688599 -83749881 + AluSx SINE Alu 35 298 -14 22 0 0 0 chr17 1688681 1688703 -83749777 + AT_rich Low_complexity Low_complexity 1 22 0 710 203 16 0 chr17 1688892 1689020 -83749460 + FLAM_A SINE Alu 4 133 0 480 316 163 37 chr17 1689075 1689565 -83748915 - L2 LINE L2 -2 3270 2736 277 192 0 0 chr17 1689567 1689619 -83748861 + Alu SINE Alu 247 298 -2 2518 170 62 18 chr17 1690209 1690245 -83748235 - L1MB2 LINE L1 -8 6163 6130 2226 131 129 8 chr17 1690245 1690626 -83747854 - MSTA LTR MaLR 0 428 2 2518 170 62 18 chr17 1690626 1691102 -83747378 - L1MB2 LINE L1 -41 6130 5628 1133 114 0 0 chr17 1691203 1691361 -83747119 + AluSg/x SINE Alu 138 295 -17 336 205 24 36 chr17 1691367 1691450 -83747030 - MER94 DNA DNA -52 82 1 790 303 69 69 chr17 1691461 1691970 -83746510 + L2 LINE L2 2804 3312 -1 3070 140 39 14 chr17 1692138 1692652 -83745828 - MER1A DNA MER1_type 0 527 1 277 303 8 53 chr17 1692705 1692837 -83745643 + Charlie8 DNA MER1_type 89 214 -2203 2013 125 3 0 chr17 1692846 1693142 -83745338 + AluSq SINE Alu 3 299 -14 234 257 68 14 chr17 1693191 1693265 -83745215 + MER5C DNA MER1_type 2 79 -245 368 252 121 89 chr17 1694359 1694700 -83743780 - L1M4 LINE L1 -2724 3422 2137 21 0 0 0 chr17 1694701 1694722 -83743758 + AT_rich Low_complexity Low_complexity 1 21 0 1647 141 21 34 chr17 1694722 1695013 -83743467 - AluJo SINE Alu -25 287 1 1036 277 125 49 chr17 1695083 1695270 -83743210 - HAL1b LINE L1 -463 885 714 886 163 141 0 chr17 1695270 1695454 -83743026 + MER6B DNA MER2_type 1 210 0 1036 277 125 49 chr17 1695454 1696002 -83742478 - HAL1b LINE L1 -634 714 94 437 187 122 0 chr17 1696035 1696142 -83742338 - L1MB7 LINE L1 -16 6168 6049 1865 214 156 63 chr17 1696191 1696396 -83742084 - L1MC4 LINE L1 -602 7440 7255 1673 171 0 28 chr17 1696396 1696717 -83741763 - AluSx SINE Alu 0 312 1 1865 214 156 63 chr17 1696717 1697166 -83741314 - L1MC4 LINE L1 -787 7255 6725 2254 103 3 0 chr17 1697422 1697733 -83740747 - AluSx SINE Alu 0 312 1 445 269 65 9 chr17 1697736 1697844 -83740636 - MIR SINE MIR -61 147 34 1282 189 23 36 chr17 1698167 1698493 -83739987 + AluJb SINE Alu 1 312 0 2454 188 75 30 chr17 1698588 1699162 -83739318 + L1MB7 LINE L1 5585 6184 0 543 319 87 0 chr17 1699311 1699526 -83738954 - MIR SINE MIR 0 262 24 1194 166 67 9 chr17 1700071 1700294 -83738186 + MER46A DNA MER2_type 1 236 0 21 0 0 0 chr17 1700431 1700452 -83738028 + AT_rich Low_complexity Low_complexity 1 21 0 815 112 72 0 chr17 1700452 1700577 -83737903 - AluJo SINE Alu -177 135 2 2192 107 0 0 chr17 1700666 1700964 -83737516 - AluSq SINE Alu -15 298 1 808 291 160 38 chr17 1701043 1701682 -83736798 + L2 LINE L2 1931 2647 -667 207 0 0 0 chr17 1702707 1702730 -83735750 + (GA)n Simple_repeat Simple_repeat 2 24 0 1924 89 23 0 chr17 1702735 1702994 -83735486 - AluSq SINE Alu -48 265 1 240 86 0 0 chr17 1703230 1703265 -83735215 + (T)n Simple_repeat Simple_repeat 1 35 0 1076 141 0 6 chr17 1703715 1703885 -83734595 + AluJb SINE Alu 117 285 -27 189 107 0 0 chr17 1704345 1704373 -83734107 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 512 133 0 0 chr17 1704373 1704456 -83734024 - L1M4b LINE L1 -6687 172 90 5332 142 25 66 chr17 1704467 1705510 -83732970 - L1MC1 LINE L1 -10 6323 5324 1898 155 0 0 chr17 1705510 1705806 -83732674 - AluSq SINE Alu -17 296 1 2322 72 7 0 chr17 1705826 1706130 -83732350 - AluY SINE Alu -5 306 1 237 245 0 0 chr17 1706326 1706379 -83732101 - MLT1F LTR MaLR 0 542 490 2061 122 0 10 chr17 1706383 1706694 -83731786 - AluSx SINE Alu -3 309 2 1482 200 3 27 chr17 1706749 1707049 -83731431 - AluJo SINE Alu -19 293 1 1138 245 50 7 chr17 1707049 1707324 -83731156 - MLT1F LTR MaLR -41 501 212 436 215 0 0 chr17 1707315 1707394 -83731086 - MLT1F LTR MaLR -472 95 17 * 1699 172 89 3 chr17 1707394 1707708 -83730772 - MER7A DNA MER2_type 0 346 8 2157 101 0 7 chr17 1707922 1708219 -83730261 + AluSg SINE Alu 1 295 -15 26 50 0 0 chr17 1708260 1708300 -83730180 + AT_rich Low_complexity Low_complexity 1 40 0 534 223 9 18 chr17 1708300 1708412 -83730068 - FLAM_A SINE Alu -27 115 5 286 122 37 183 chr17 1708463 1708545 -83729935 - MER2 DNA MER2_type -3 342 273 1600 150 36 39 chr17 1708549 1708856 -83729624 + AluJb SINE Alu 7 312 0 864 186 69 0 chr17 1708885 1709073 -83729407 - MER2 DNA MER2_type -136 209 9 384 310 76 25 chr17 1709085 1709282 -83729198 - MLT1K LTR MaLR -34 554 348 2190 106 0 7 chr17 1709435 1709738 -83728742 - AluSx SINE Alu -11 301 1 1500 144 0 32 chr17 1709786 1710064 -83728416 - AluSx SINE Alu -33 279 11 2230 83 0 16 chr17 1710086 1710398 -83728082 - AluY SINE Alu -4 307 1 1858 157 23 17 chr17 1710401 1710926 -83727554 - L1M4 LINE L1 -692 5486 4958 1743 110 27 40 chr17 1711523 1711823 -83726657 - AluSq SINE Alu -17 296 1 1925 131 0 19 chr17 1711908 1712222 -83726258 + AluSg SINE Alu 1 308 -2 2559 169 61 21 chr17 1712803 1712839 -83725641 - L1MB2 LINE L1 -8 6163 6130 2137 130 128 16 chr17 1712839 1713223 -83725257 - MSTA LTR MaLR 0 428 2 2559 169 61 21 chr17 1713223 1713708 -83724772 - L1MB2 LINE L1 -41 6130 5621 2200 93 0 7 chr17 1713801 1714103 -83724377 + AluSx SINE Alu 1 300 -12 1606 143 0 44 chr17 1714286 1714611 -83723869 - AluSx SINE Alu 0 312 1 2283 89 0 3 chr17 1714777 1715080 -83723400 - AluSp SINE Alu -11 302 1 2060 97 3 7 chr17 1715677 1715967 -83722513 - AluSp SINE Alu -24 289 1 235 234 206 28 chr17 1716316 1716423 -83722057 - MIR SINE MIR -66 142 17 2060 127 3 0 chr17 1716586 1716885 -83721595 + AluJb SINE Alu 3 302 -10 243 61 0 0 chr17 1716950 1716983 -83721497 + (TG)n Simple_repeat Simple_repeat 2 34 0 1472 173 0 14 chr17 1716983 1717261 -83721219 - AluSx SINE Alu -34 278 5 24 0 0 0 chr17 1717270 1717294 -83721186 + AT_rich Low_complexity Low_complexity 1 24 0 1689 188 0 0 chr17 1717516 1717803 -83720677 + AluJb SINE Alu 1 287 -25 263 186 129 0 chr17 1717854 1717924 -83720556 + MIR SINE MIR 125 203 -59 2153 93 0 17 chr17 1717971 1718272 -83720208 - AluSx SINE Alu -16 296 1 2349 54 0 22 chr17 1718334 1718647 -83719833 - AluY SINE Alu -5 306 1 830 180 56 11 chr17 1718739 1718917 -83719563 + AluSg/x SINE Alu 121 306 -6 1533 159 29 14 chr17 1718934 1719211 -83719269 + AluJo SINE Alu 3 283 -29 194 0 0 37 chr17 1719692 1719719 -83718761 + (TTAA)n Simple_repeat Simple_repeat 3 28 0 1667 164 0 17 chr17 1719719 1720009 -83718471 - AluJb SINE Alu -25 287 1 2211 90 7 3 chr17 1720321 1720621 -83717859 + AluSx SINE Alu 1 301 -11 1115 121 0 6 chr17 1720625 1720791 -83717689 + AluSg/x SINE Alu 138 302 -10 1996 119 3 10 chr17 1720846 1721149 -83717331 + AluSx SINE Alu 1 301 -11 1746 214 107 137 chr17 1721472 1722567 -83715913 + L1MC4 LINE L1 6698 7820 -222 1951 118 3 19 chr17 1722567 1722880 -83715600 + AluSx SINE Alu 5 312 0 1746 214 107 137 chr17 1722880 1723094 -83715386 + L1MC4 LINE L1 7820 8039 -3 1925 133 31 0 chr17 1723573 1723866 -83714614 - AluJb SINE Alu -10 302 1 1937 120 7 13 chr17 1724082 1724391 -83714089 - AluSx SINE Alu -2 310 4 2294 225 130 15 chr17 1725191 1726021 -83712459 - L1ME1 LINE L1 -40 6195 5238 603 217 80 6 chr17 1726037 1726212 -83712268 - L1ME1 LINE L1 -1278 4937 4750 812 164 0 0 chr17 1726232 1726360 -83712120 + FLAM_C SINE Alu 1 128 -15 1089 193 162 9 chr17 1726361 1726682 -83711798 - L1ME1 LINE L1 -1459 4756 4387 1756 73 0 0 chr17 1726694 1726914 -83711566 - AluSc SINE Alu -10 299 80 322 91 0 45 chr17 1726914 1726980 -83711500 + (T)n Simple_repeat Simple_repeat 1 63 0 5775 52 10 24 chr17 1726980 1727786 -83710694 - SVA Other Other 0 1386 592 1199 82 27 50 chr17 1727857 1728283 -83710197 - SVA Other Other -520 866 635 4554 87 60 59 chr17 1728312 1729128 -83709352 - SVA Other Other -520 866 50 297 0 0 0 chr17 1729134 1729167 -83709313 + (GGGAGA)n Simple_repeat Simple_repeat 5 37 0 645 144 0 0 chr17 1729167 1729257 -83709223 - AluSc SINE Alu -218 91 2 2027 190 21 104 chr17 1729262 1729915 -83708565 - L1ME1 LINE L1 -1818 4397 3799 30 0 0 0 chr17 1729934 1729964 -83708516 + AT_rich Low_complexity Low_complexity 1 30 0 2018 125 0 3 chr17 1729964 1730253 -83708227 - AluSx SINE Alu -18 294 7 333 108 15 0 chr17 1730279 1730344 -83708136 - L1MA7 LINE L1 0 6291 6226 1146 150 120 45 chr17 1730344 1730611 -83707869 - MER7C DNA MER2_type 0 603 317 919 110 0 15 chr17 1730613 1730749 -83707731 + AluY SINE Alu 1 134 -177 1916 111 0 20 chr17 1730749 1731055 -83707425 + AluSx SINE Alu 1 300 -12 1824 153 32 29 chr17 1731055 1731281 -83707199 - MER7C DNA MER2_type -2714 314 84 1651 119 60 11 chr17 1731281 1731588 -83706892 - AluSx SINE Alu 0 320 1 1824 153 32 29 chr17 1731588 1731673 -83706807 - MER7C DNA MER2_type -2944 84 1 1031 150 79 22 chr17 1731673 1731900 -83706580 - L1MA7 LINE L1 -64 6227 5988 781 197 31 44 chr17 1731901 1731975 -83706505 - L1ME1 LINE L1 -2403 3812 3739 2067 89 0 48 chr17 1731975 1732291 -83706189 + AluY SINE Alu 1 301 -10 781 197 31 44 chr17 1732291 1732444 -83706036 - L1ME1 LINE L1 -2476 3739 3588 1787 106 66 15 chr17 1732510 1732783 -83705697 + AluSg SINE Alu 7 293 -17 954 161 12 0 chr17 1732783 1732945 -83705535 + AluSg/x SINE Alu 134 297 -15 660 219 85 83 chr17 1732945 1733320 -83705160 - L1ME1 LINE L1 -2685 3530 3155 * 700 313 53 22 chr17 1733312 1733635 -83704845 - L1ME1 LINE L1 -6033 363 31 180 0 0 0 chr17 1734003 1734023 -83704457 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1725 196 56 39 chr17 1734332 1734746 -83703734 - L1PB4 LINE L1 -3 6153 5733 1825 153 7 7 chr17 1734757 1735098 -83703382 - AluJo SINE Alu 0 345 5 266 176 0 27 chr17 1735130 1735204 -83703276 - L1PB4 LINE L1 -1101 5045 4974 1134 202 4 50 chr17 1735210 1735244 -83703236 - AluJo SINE Alu -10 302 268 2304 65 0 3 chr17 1735244 1735537 -83702943 + AluSc SINE Alu 1 292 -17 1134 202 4 50 chr17 1735537 1735760 -83702720 - AluJo SINE Alu -44 268 57 811 151 8 8 chr17 1735760 1735886 -83702594 - FLAM_C SINE Alu -16 127 2 22 35 0 0 chr17 1735991 1736020 -83702460 + AT_rich Low_complexity Low_complexity 1 29 0 31 0 0 0 chr17 1736137 1736168 -83702312 + AT_rich Low_complexity Low_complexity 1 31 0 208 352 46 0 chr17 1736184 1736292 -83702188 - MIR3 SINE MIR -52 156 44 1548 166 0 27 chr17 1736383 1736679 -83701801 + AluJo SINE Alu 1 288 -24 2110 84 30 7 chr17 1737005 1737302 -83701178 + AluSx SINE Alu 1 304 -8 2050 126 7 0 chr17 1737954 1738263 -83700217 + AluSx SINE Alu 1 311 -1 1761 131 0 45 chr17 1738625 1738937 -83699543 + AluJb SINE Alu 3 300 -12 1757 109 6 61 chr17 1741322 1741634 -83696846 + AluSx SINE Alu 1 295 -17 195 306 0 48 chr17 1742230 1742292 -83696188 - MIR SINE MIR -194 68 10 678 159 102 68 chr17 1742892 1743068 -83695412 + MIR SINE MIR 81 262 0 557 104 104 0 chr17 1743170 1743266 -83695214 + MER85 DNA T2_type 1 106 -33 1589 165 7 23 chr17 1743267 1743570 -83694910 - AluJb SINE Alu -14 298 1 2009 100 0 32 chr17 1743607 1743916 -83694564 + AluY SINE Alu 1 299 -12 1372 203 120 49 chr17 1744134 1744619 -83693861 + L1ME3A LINE L1 5362 5881 -289 1942 124 0 10 chr17 1744620 1744911 -83693569 + AluSq SINE Alu 1 288 -25 30 0 0 0 chr17 1744911 1744941 -83693539 + AT_rich Low_complexity Low_complexity 1 30 0 22 56 0 0 chr17 1745113 1745149 -83693331 + AT_rich Low_complexity Low_complexity 1 36 0 2390 38 0 19 chr17 1745152 1745465 -83693015 + AluY SINE Alu 1 307 -4 1141 153 16 0 chr17 1745573 1745756 -83692724 + AluJo SINE Alu 110 295 -17 2080 75 0 24 chr17 1745770 1746065 -83692415 + AluSx SINE Alu 11 298 -14 1335 163 19 141 chr17 1746070 1746390 -83692090 - L1MC5 LINE L1 -628 7333 6976 2053 97 35 0 chr17 1746390 1746679 -83691801 + AluSx SINE Alu 1 299 -13 1335 163 19 141 chr17 1746679 1746727 -83691753 - L1MC5 LINE L1 -985 6976 7016 2247 91 3 3 chr17 1746727 1747035 -83691445 + AluSp SINE Alu 5 312 -1 1335 163 19 141 chr17 1747035 1747077 -83691403 - L1MC5 LINE L1 -944 7017 6972 912 101 0 43 chr17 1747128 1747266 -83691214 - FLAM_C SINE Alu 0 133 2 351 0 0 0 chr17 1747278 1747317 -83691163 + (TA)n Simple_repeat Simple_repeat 1 39 0 852 55 0 0 chr17 1747324 1747434 -83691046 - AluYa5/8 SINE Alu 0 310 201 861 254 74 32 chr17 1747449 1747760 -83690720 - L1MC4 LINE L1 -1018 7024 6701 282 206 0 0 chr17 1747800 1747863 -83690617 + CT-rich Low_complexity Low_complexity 5 67 0 924 143 0 26 chr17 1747896 1748050 -83690430 - AluJb SINE Alu -161 151 2 790 150 0 16 chr17 1748148 1748275 -83690205 + FLAM_A SINE Alu 8 132 -10 313 253 82 77 chr17 1748652 1748725 -83689755 - L1MC4a LINE L1 -1754 6054 5983 1688 142 0 41 chr17 1748725 1749041 -83689439 - AluSx SINE Alu -9 303 1 313 253 82 77 chr17 1749041 1749135 -83689345 - L1MC4a LINE L1 -1825 5983 5883 2171 102 0 10 chr17 1749135 1749448 -83689032 - AluSg SINE Alu 0 310 1 313 253 82 77 chr17 1749448 1749461 -83689019 - L1MC4a LINE L1 -1925 5883 5872 647 216 0 24 chr17 1749541 1749666 -83688814 + FLAM_A SINE Alu 1 122 -11 1396 151 0 4 chr17 1749996 1750221 -83688259 + AluJb SINE Alu 84 307 -5 189 0 0 0 chr17 1750272 1750293 -83688187 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 2183 94 0 3 chr17 1750941 1751238 -83687242 - AluY SINE Alu -15 296 1 402 204 0 11 chr17 1751359 1751447 -83687033 + AluJ/FLAM SINE Alu 6 92 -220 2461 0 0 14 chr17 1751494 1751823 -83686657 + AluYa5 SINE Alu 1 325 0 378 0 0 0 chr17 1752609 1752651 -83685829 + (CA)n Simple_repeat Simple_repeat 2 43 0 1315 112 12 89 chr17 1752902 1753240 -83685240 - AluSx SINE Alu 0 312 1 1864 85 48 7 chr17 1753272 1753566 -83684914 + AluSc SINE Alu 1 305 0 1983 98 0 77 chr17 1753590 1753917 -83684563 - AluSq SINE Alu -10 303 2 192 312 33 44 chr17 1754423 1754539 -83683941 + MIR SINE MIR 15 129 -79 1286 219 0 7 chr17 1754589 1754872 -83683608 - AluJo SINE Alu -15 297 17 186 133 0 0 chr17 1755276 1755306 -83683174 + (T)n Simple_repeat Simple_repeat 1 30 0 1841 120 3 20 chr17 1757383 1757682 -83680798 - AluSq SINE Alu -19 294 1 243 0 0 0 chr17 1757767 1757794 -83680686 + (TG)n Simple_repeat Simple_repeat 2 28 0 436 254 135 44 chr17 1758144 1758396 -83680084 - L1ME4a LINE L1 -2 6119 5845 2095 88 20 7 chr17 1758633 1758938 -83679542 + AluSx SINE Alu 1 309 -3 319 255 98 72 chr17 1759886 1760039 -83678441 - L1ME4a LINE L1 -3 6118 5962 2263 83 0 13 chr17 1760221 1760534 -83677946 + AluSg SINE Alu 1 309 -1 255 230 23 69 chr17 1762001 1762088 -83676392 - MIR SINE MIR -133 129 47 2096 55 4 11 chr17 1762441 1762716 -83675764 + AluSx SINE Alu 1 273 -39 21 43 0 0 chr17 1762905 1762928 -83675552 + AT_rich Low_complexity Low_complexity 1 23 0 1941 102 10 14 chr17 1763435 1763730 -83674750 - AluSq SINE Alu -19 294 1 2049 92 3 22 chr17 1763842 1764158 -83674322 + AluSx SINE Alu 1 310 -2 532 287 14 0 chr17 1764164 1764307 -83674173 - Charlie8 DNA MER1_type -2196 221 77 1711 171 0 13 chr17 1764328 1764637 -83673843 + AluJb SINE Alu 1 305 -7 190 246 0 18 chr17 1764856 1764913 -83673567 - L3 LINE CR1 -377 1200 1145 2126 108 0 3 chr17 1765403 1765709 -83672771 - AluSc SINE Alu -4 305 1 2124 49 3 21 chr17 1765735 1766059 -83672421 - AluY SINE Alu 0 320 2 2099 85 10 7 chr17 1766084 1766379 -83672101 + AluSp SINE Alu 1 296 -17 621 165 0 10 chr17 1766415 1766518 -83671962 + FLAM_C SINE Alu 2 103 -40 2314 100 0 0 chr17 1766653 1766963 -83671517 - AluSx SINE Alu -2 310 1 2192 98 0 3 chr17 1766965 1767262 -83671218 - AluSq SINE Alu -17 296 1 302 231 29 19 chr17 1767523 1767627 -83670853 - MIR SINE MIR -77 131 27 613 56 0 0 chr17 1767734 1767827 -83670653 + AluSp/q SINE Alu 212 304 0 28 0 0 0 chr17 1767858 1767886 -83670594 + AT_rich Low_complexity Low_complexity 1 28 0 382 258 147 12 chr17 1767886 1768049 -83670431 + L1 LINE L1 3766 3950 -2196 2339 89 0 0 chr17 1768331 1768635 -83669845 - AluSg SINE Alu -6 304 1 2221 79 6 29 chr17 1768886 1769202 -83669278 - AluY SINE Alu -2 309 1 2141 150 70 20 chr17 1769202 1769601 -83668879 + L1MD1 LINE L1 5582 6000 -359 819 171 7 7 chr17 1769604 1769756 -83668724 + L1MD1 LINE L1 6084 6235 -7 1173 108 12 0 chr17 1769758 1769925 -83668555 - AluSq SINE Alu -15 298 130 2063 99 0 48 chr17 1770315 1770629 -83667851 - AluSq SINE Alu -14 299 1 292 208 24 112 chr17 1770668 1770793 -83667687 - L2 LINE L2 -936 2378 2265 183 167 0 0 chr17 1770801 1770831 -83667649 + MIR SINE MIR 92 121 -141 615 282 81 26 chr17 1771040 1771274 -83667206 + Charlie8 DNA MER1_type 26 272 -2145 621 167 19 0 chr17 1771302 1771410 -83667070 - L1MB5 LINE L1 -6 6168 6059 1610 122 0 8 chr17 1771411 1771657 -83666823 - AluSx SINE Alu -10 302 59 1079 93 10 62 chr17 1771758 1771894 -83666586 - L1MC/D LINE L1 -892 5467 5342 2048 117 0 0 chr17 1771894 1772184 -83666296 - AluSx SINE Alu -22 290 1 1079 93 10 62 chr17 1772184 1772240 -83666240 - L1MC/D LINE L1 -1017 5342 5285 2841 159 28 47 chr17 1772248 1772850 -83665630 - L1MB7 LINE L1 0 6184 5594 277 182 36 0 chr17 1772850 1772905 -83665575 - L1M4 LINE L1 -534 5650 5594 265 295 0 0 chr17 1772901 1772962 -83665518 - L1M4 LINE L1 -530 5654 5594 * 330 206 7 0 chr17 1772945 1773018 -83665462 - L1M3 LINE L1 -510 5670 5595 339 223 30 5 chr17 1773021 1773143 -83665337 - L1M1 LINE L1 -510 5670 5582 * 926 218 14 45 chr17 1773118 1773338 -83665142 - L1M4 LINE L1 -506 5668 5456 863 71 0 0 chr17 1773438 1773536 -83664944 - AluSq/x SINE Alu -186 126 29 180 97 0 0 chr17 1774169 1774200 -83664280 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 1681 159 3 14 chr17 1774202 1774485 -83663995 - AluSx SINE Alu -30 282 3 427 94 0 0 chr17 1774602 1774666 -83663814 + Alu SINE Alu 236 299 -12 183 385 13 0 chr17 1774880 1774958 -83663522 - L2 LINE L2 -55 3258 3180 917 219 40 4 chr17 1775383 1775634 -83662846 - L1MB3 LINE L1 0 6183 5924 576 200 77 0 chr17 1775637 1775767 -83662713 - MER46A DNA MER2_type 0 236 97 1153 74 0 0 chr17 1775767 1775902 -83662578 + AluSq/x SINE Alu 1 135 -177 2277 116 3 0 chr17 1775902 1776204 -83662276 + AluSx SINE Alu 1 303 -9 592 162 0 0 chr17 1776204 1776303 -83662177 - MER46A DNA MER2_type -132 104 6 2026 98 0 4 chr17 1776429 1776684 -83661796 - AluSx SINE Alu -58 254 1 807 154 7 0 chr17 1776684 1776820 -83661660 + MLT1D LTR MaLR 367 503 -2 2158 97 49 3 chr17 1777262 1777550 -83660930 - AluSx SINE Alu -11 301 1 1447 97 181 30 chr17 1777815 1778114 -83660366 + THE1C LTR MaLR 7 350 -25 665 206 23 0 chr17 1778315 1778446 -83660034 + MER44D DNA MER2_type 600 605 0 275 278 17 17 chr17 1778446 1778561 -83659919 - L1M4 LINE L1 -2399 3747 3633 2564 81 0 7 chr17 1778580 1778890 -83659590 - AluSx SINE Alu -4 308 1 450 308 67 33 chr17 1779255 1779554 -83658926 + L1MC/D LINE L1 5493 5801 -320 373 210 0 27 chr17 1779555 1779662 -83658818 + AluS SINE Alu 2 84 -219 767 217 54 12 chr17 1780335 1780501 -83657979 - MER63A DNA MER1_type -37 173 1 23 0 0 0 chr17 1781401 1781424 -83657056 + AT_rich Low_complexity Low_complexity 1 23 0 1084 222 0 9 chr17 1781833 1782058 -83656422 - MER58A DNA MER1_type 0 224 2 228 185 11 179 chr17 1782067 1782215 -83656265 + MER113 DNA MER1_type? 1 114 -407 2349 91 13 3 chr17 1782215 1782524 -83655956 - AluSp SINE Alu 0 313 2 228 185 11 179 chr17 1782524 1782559 -83655921 + MER113 DNA MER1_type? 114 153 -368 1874 125 96 0 chr17 1784100 1784380 -83654100 - AluSx SINE Alu -5 307 1 201 74 0 0 chr17 1785068 1785095 -83653385 + (GGGTG)n Simple_repeat Simple_repeat 3 29 0 1147 307 60 73 chr17 1785389 1785596 -83652884 - L1M4 LINE L1 -2292 3854 3646 1474 88 206 88 chr17 1785596 1785868 -83652612 - AluSq SINE Alu -9 304 1 1147 307 60 73 chr17 1785868 1786423 -83652057 - L1M4 LINE L1 -2500 3646 3102 283 224 75 0 chr17 1786506 1786573 -83651907 - MIR SINE MIR -85 177 106 740 186 8 0 chr17 1786631 1786760 -83651720 - FLAM_C SINE Alu 0 133 4 337 308 28 41 chr17 1786767 1787085 -83651395 - L1M4 LINE L1 -3104 3042 2729 2023 142 17 0 chr17 1787169 1787458 -83651022 - AluJb SINE Alu -18 294 1 1058 284 83 11 chr17 1787464 1787907 -83650573 + L1MC/D LINE L1 5287 5761 -2047 1719 103 0 0 chr17 1787913 1788136 -83650344 - AluSg/x SINE Alu -1 311 89 477 130 0 0 chr17 1788236 1788305 -83650175 - AluS SINE Alu -243 70 2 837 228 92 13 chr17 1788353 1788581 -83649899 - MIR SINE MIR -1 261 16 196 196 0 54 chr17 1790307 1790419 -83648061 + G-rich Low_complexity Low_complexity 3 108 0 1894 75 0 17 chr17 1790605 1790846 -83647634 - AluSq SINE Alu -76 237 1 733 294 73 39 chr17 1790846 1791645 -83646835 - L1MEd LINE L1 -2867 3262 2437 426 275 72 4 chr17 1792192 1792428 -83646052 - L1MEd LINE L1 -3759 2370 2119 2184 123 7 13 chr17 1792442 1792752 -83645728 - AluSx SINE Alu -4 308 1 202 222 25 49 chr17 1792781 1792862 -83645618 + T-rich Low_complexity Low_complexity 2 80 0 252 339 87 32 chr17 1793185 1793326 -83645154 - HAL1b LINE L1 -702 646 487 2445 77 0 26 chr17 1793326 1793639 -83644841 - AluY SINE Alu -6 305 1 252 339 87 32 chr17 1793639 1793715 -83644765 - HAL1b LINE L1 -861 487 417 23 54 0 0 chr17 1793772 1793809 -83644671 + AT_rich Low_complexity Low_complexity 1 37 0 519 299 54 9 chr17 1793870 1794094 -83644386 - L1MEd LINE L1 -4898 1221 988 219 335 112 29 chr17 1794130 1794157 -83644323 + L2 LINE L2 2661 2684 -630 2250 124 0 0 chr17 1794157 1794464 -83644016 - AluSq SINE Alu -5 308 2 219 335 112 29 chr17 1794464 1794606 -83643874 + L2 LINE L2 2684 2844 -470 285 167 0 0 chr17 1794826 1794874 -83643606 - Alu SINE Alu -247 52 5 2323 63 14 3 chr17 1796786 1797072 -83641408 - AluSx SINE Alu -23 289 1 189 74 0 0 chr17 1798537 1798564 -83639916 + (ATG)n Simple_repeat Simple_repeat 2 28 0 237 297 51 93 chr17 1798616 1798704 -83639776 - MIR SINE MIR -65 143 60 2393 87 3 13 chr17 1798704 1799013 -83639467 + AluSg SINE Alu 1 306 -4 237 297 51 93 chr17 1799013 1799042 -83639438 - MIR SINE MIR -148 60 31 280 355 11 0 chr17 1799158 1799251 -83639229 - MIR SINE MIR -60 148 55 231 193 35 0 chr17 1799524 1799581 -83638899 + T-rich Low_complexity Low_complexity 2 60 0 228 154 0 0 chr17 1799706 1799758 -83638722 + (TAGA)n Simple_repeat Simple_repeat 3 54 0 467 266 140 70 chr17 1799815 1800338 -83638142 - L1MEc LINE L1 -3574 2641 2119 2317 85 0 10 chr17 1801540 1801835 -83636645 - AluY SINE Alu -19 292 1 252 333 43 11 chr17 1802630 1802723 -83635757 + L2 LINE L2 3168 3263 -9 604 291 28 14 chr17 1803553 1803766 -83634714 - MIR SINE MIR -33 229 14 214 200 186 0 chr17 1803936 1804006 -83634474 + MER5A DNA MER1_type 85 167 -22 201 167 19 56 chr17 1804521 1804575 -83633905 + C-rich Low_complexity Low_complexity 2 53 0 2375 100 7 0 chr17 1805151 1805460 -83633020 - AluSx SINE Alu -1 311 1 316 311 8 42 chr17 1805464 1805583 -83632897 - MIR SINE MIR -101 161 47 414 263 68 8 chr17 1805630 1805748 -83632732 + MIR3 SINE MIR 30 154 -54 325 266 79 79 chr17 1806588 1806765 -83631715 + MIR SINE MIR 15 191 -71 2634 62 0 0 chr17 1808150 1808457 -83630023 - AluY SINE Alu -4 307 1 451 326 59 0 chr17 1809249 1809470 -83629010 + L1MC/D LINE L1 5567 5800 -2008 * 756 261 22 14 chr17 1809458 1809734 -83628746 + L1MB5 LINE L1 3334 3611 -2535 * 2579 205 31 7 chr17 1809713 1810407 -83628073 + L1MB5 LINE L1 5182 5890 -284 2252 96 0 0 chr17 1810412 1810737 -83627743 + AluSg SINE Alu 1 325 0 378 211 0 10 chr17 1810797 1810900 -83627580 + L1M4 LINE L1 5597 5694 -470 2151 38 0 0 chr17 1810900 1811139 -83627341 + AluY SINE Alu 1 239 -72 2262 109 3 0 chr17 1812872 1813174 -83625306 + AluSx SINE Alu 2 304 -8 2287 121 3 0 chr17 1813249 1813556 -83624924 - AluSq SINE Alu -5 308 1 299 284 78 23 chr17 1813928 1814101 -83624379 + MIR SINE MIR 3 184 -61 289 303 215 46 chr17 1815063 1815324 -83623156 + L2 LINE L2 2966 3270 -2 317 246 0 0 chr17 1815665 1815734 -83622746 - MIR SINE MIR -79 129 61 1348 19 0 0 chr17 1815993 1816155 -83622325 + L1PA4 LINE L1 5994 6155 0 231 292 21 21 chr17 1816416 1816512 -83621968 + MIR SINE MIR 21 116 -92 2224 81 4 0 chr17 1816669 1816942 -83621538 - AluSp SINE Alu -39 274 1 1081 82 0 7 chr17 1816942 1817077 -83621403 - AluSq/x SINE Alu -179 134 1 2202 130 0 0 chr17 1817096 1817388 -83621092 - AluSx SINE Alu -20 292 1 581 265 24 30 chr17 1817406 1817455 -83621025 + MIR SINE MIR 98 146 -116 2483 139 12 21 chr17 1817455 1817526 -83620954 - MSTA LTR MaLR 0 428 358 2415 105 3 0 chr17 1817526 1817830 -83620650 + AluSg SINE Alu 1 305 -5 2483 139 12 21 chr17 1817830 1818190 -83620290 - MSTA LTR MaLR -70 358 1 581 265 24 30 chr17 1818190 1818306 -83620174 + MIR SINE MIR 146 262 0 2490 81 7 0 chr17 1819064 1819373 -83619107 - AluSx SINE Alu -1 311 1 1233 128 35 62 chr17 1819376 1819602 -83618878 - AluJo SINE Alu -7 305 86 350 305 114 0 chr17 1819917 1820022 -83618458 + MIR SINE MIR 76 192 -70 457 210 16 113 chr17 1820494 1820564 -83617916 - MLT1C LTR MaLR -3 464 456 2259 113 0 10 chr17 1820564 1820875 -83617605 - AluSx SINE Alu -4 308 1 457 210 16 113 chr17 1820875 1820974 -83617506 - MLT1C LTR MaLR -11 456 349 427 230 143 53 chr17 1821127 1821392 -83617088 - MLT1C LTR MaLR -123 382 94 1272 220 9 46 chr17 1821393 1821716 -83616764 - MLT1A1 LTR MaLR 0 365 55 674 118 14 217 chr17 1822194 1822415 -83616065 - AluSg/x SINE Alu -1 308 133 2446 84 3 0 chr17 1822415 1822711 -83615769 - AluSg SINE Alu -13 297 1 2246 95 10 17 chr17 1822711 1823007 -83615473 - AluSx SINE Alu -18 294 1 879 222 116 58 chr17 1823091 1823541 -83614939 - HAL1b LINE L1 -6 1342 867 212 356 0 42 chr17 1823894 1824012 -83614468 + G-rich Low_complexity Low_complexity 2 114 0 1061 153 45 0 chr17 1824575 1824794 -83613686 + AluSg/x SINE Alu 96 322 0 1601 112 32 83 chr17 1824794 1824955 -83613525 + L1M3 LINE L1 5319 5458 -710 2150 76 6 29 chr17 1824955 1825271 -83613209 + AluSc SINE Alu 1 309 0 1601 112 32 83 chr17 1825271 1825423 -83613057 + L1M3 LINE L1 5458 5616 -552 * 4675 209 56 77 chr17 1825422 1825970 -83612510 - L1M4 LINE L1 -1191 4955 4397 2185 72 31 7 chr17 1825970 1826262 -83612218 - AluY SINE Alu -12 299 1 4675 209 56 77 chr17 1826262 1826866 -83611614 - L1M4 LINE L1 -1749 4397 3839 2099 109 3 3 chr17 1826866 1827178 -83611302 - AluSx SINE Alu 0 312 1 4675 209 56 77 chr17 1827178 1827537 -83610943 - L1M4 LINE L1 -2307 3839 3474 240 209 149 88 chr17 1827773 1827847 -83610633 - MER5A DNA MER1_type -32 157 89 2176 92 3 0 chr17 1827847 1828142 -83610338 - AluSq SINE Alu -17 296 1 240 209 149 88 chr17 1828142 1828215 -83610265 - MER5A DNA MER1_type -100 89 1 459 246 25 49 chr17 1828613 1828735 -83609745 - L2 LINE L2 -2 3311 3193 196 206 0 0 chr17 1830481 1830515 -83607965 - L2 LINE L2 -10 3262 3229 181 143 0 0 chr17 1830642 1830670 -83607810 - L2 LINE L2 -16 3256 3229 181 143 0 0 chr17 1830766 1830794 -83607686 - L2 LINE L2 -16 3256 3229 2137 123 7 0 chr17 1831131 1831439 -83607041 - AluSx SINE Alu -2 310 1 311 280 48 79 chr17 1831588 1831693 -83606787 - MIR SINE MIR -13 249 151 2331 95 0 0 chr17 1831693 1831998 -83606482 - AluSx SINE Alu -7 305 1 311 280 48 79 chr17 1831998 1832081 -83606399 - MIR SINE MIR -111 151 67 342 190 0 0 chr17 1832467 1832525 -83605955 + MLT1F1 LTR MaLR 6 63 -504 2053 125 3 0 chr17 1832530 1832826 -83605654 + AluJb SINE Alu 7 303 -9 2154 94 0 0 chr17 1832839 1833148 -83605332 + AluSx SINE Alu 1 309 0 355 298 33 50 chr17 1833396 1833620 -83604860 - L1ME LINE L1 -372 5798 5579 1962 111 7 4 chr17 1833984 1834264 -83604216 - AluSq SINE Alu -32 281 1 304 310 200 0 chr17 1834267 1834422 -83604058 - MIR SINE MIR -61 201 16 645 217 28 28 chr17 1834679 1834859 -83603621 - MER104 DNA MER2_type 0 180 1 2174 103 0 0 chr17 1835058 1835350 -83603130 + AluSx SINE Alu 1 292 -20 253 229 29 0 chr17 1835785 1835855 -83602625 - L2 LINE L2 -284 2988 2917 1746 71 4 8 chr17 1836646 1836884 -83601596 - AluSg/x SINE Alu -3 307 71 548 44 0 0 chr17 1836885 1836953 -83601527 - AluY SINE Alu -10 302 235 21 0 0 0 chr17 1836953 1836974 -83601506 + AT_rich Low_complexity Low_complexity 1 21 0 297 0 0 0 chr17 1838176 1838209 -83600271 + (CA)n Simple_repeat Simple_repeat 2 34 0 2193 97 13 7 chr17 1838339 1838648 -83599832 - AluSx SINE Alu -1 311 1 262 130 0 43 chr17 1838649 1838718 -83599762 + (TTTTG)n Simple_repeat Simple_repeat 5 70 0 228 326 61 0 chr17 1840055 1840153 -83598327 - MER91A DNA MER1_type -48 148 45 1811 143 14 10 chr17 1840242 1840536 -83597944 - AluJo SINE Alu -15 297 3 240 326 22 0 chr17 1841178 1841270 -83597210 + L3b LINE CR1 1283 1376 -207 885 226 52 82 chr17 1841783 1842037 -83596443 + MLT1D LTR MaLR 1 242 -263 2483 31 0 0 chr17 1842037 1842328 -83596152 + AluY SINE Alu 1 291 -20 885 226 52 82 chr17 1842328 1842441 -83596039 + MLT1D LTR MaLR 242 357 -148 1511 90 10 0 chr17 1842541 1842742 -83595738 - THE1A LTR MaLR -152 203 1 11444 91 10 24 chr17 1842742 1843827 -83594653 - THE1A-int LTR MaLR 0 1580 481 2113 103 37 0 chr17 1843827 1844127 -83594353 - AluY SINE Alu 0 311 1 11444 91 10 24 chr17 1844127 1844200 -83594280 - THE1A-int LTR MaLR -1099 481 408 1849 108 3 42 chr17 1844200 1844507 -83593973 - AluSx SINE Alu -15 297 3 11444 91 10 24 chr17 1844507 1844950 -83593530 - THE1A-int LTR MaLR -1172 408 1 2505 114 14 0 chr17 1844950 1845300 -83593180 - THE1A LTR MaLR 0 355 1 666 185 0 0 chr17 1845303 1845411 -83593069 - FLAM_C SINE Alu -34 109 2 23 54 0 0 chr17 1845571 1845608 -83592872 + AT_rich Low_complexity Low_complexity 1 37 0 1669 140 3 57 chr17 1846213 1846528 -83591952 + AluJo SINE Alu 1 298 -14 2132 101 7 10 chr17 1846538 1846835 -83591645 + AluSx SINE Alu 1 296 -16 1979 100 0 4 chr17 1847139 1847418 -83591062 - AluSg SINE Alu -30 280 3 15218 208 16 12 chr17 1847420 1851423 -83587057 - L1PA12 LINE L1 -752 6832 2822 230 283 65 0 chr17 1851431 1851523 -83586957 + L1ME LINE L1 5727 5824 -297 2200 106 3 6 chr17 1851527 1851839 -83586641 + AluSx SINE Alu 1 311 -1 1138 282 151 10 chr17 1851842 1852431 -83586049 - L1PA12 LINE L1 -6186 1399 728 434 223 133 30 chr17 1852470 1852636 -83585844 - L1MC5 LINE L1 -37 7924 7742 828 176 0 0 chr17 1852653 1852795 -83585685 - FLAM_C SINE Alu 0 143 2 938 208 83 39 chr17 1852796 1853133 -83585347 - L1MC5 LINE L1 -232 7729 7378 1693 167 63 0 chr17 1853134 1853451 -83585029 - MER2 DNA MER2_type 0 345 9 490 134 107 9 chr17 1853460 1853572 -83584908 - L1MC5 LINE L1 -583 7378 7256 2024 127 13 0 chr17 1853728 1854035 -83584445 - AluSq SINE Alu -2 311 1 312 343 180 35 chr17 1854154 1854701 -83583779 + L2 LINE L2 1780 2467 -847 2121 99 3 7 chr17 1854701 1855003 -83583477 - AluSx SINE Alu -11 301 1 312 343 180 35 chr17 1855003 1855205 -83583275 + L2 LINE L2 2467 2638 -676 213 329 21 100 chr17 1855406 1855448 -83583032 + L2 LINE L2 3144 3188 -84 2038 106 17 0 chr17 1855448 1855741 -83582739 + AluSq SINE Alu 1 298 -15 213 329 21 100 chr17 1855741 1855838 -83582642 + L2 LINE L2 3188 3272 0 1712 147 10 17 chr17 1855922 1856222 -83582258 - AluJo SINE Alu -4 308 11 1216 173 57 83 chr17 1856385 1856685 -83581795 + AluJb SINE Alu 1 292 -20 620 160 28 0 chr17 1857017 1857123 -83581357 - AluSx SINE Alu -10 300 192 917 141 0 0 chr17 1857130 1857265 -83581215 - AluSx SINE Alu -178 135 1 1299 194 44 34 chr17 1857298 1857591 -83580889 - AluJo SINE Alu -16 296 1 290 277 0 60 chr17 1857610 1857693 -83580787 + L2 LINE L2 3185 3262 -10 1257 181 58 11 chr17 1857898 1858158 -83580322 + AluJo SINE Alu 28 299 -13 2101 106 0 7 chr17 1859072 1859373 -83579107 - AluSq SINE Alu -14 299 1 2303 74 3 0 chr17 1859466 1859763 -83578717 - AluY SINE Alu -13 298 1 2028 96 0 4 chr17 1860166 1860446 -83578034 - AluSg SINE Alu -16 294 16 22 35 0 0 chr17 1860453 1860482 -83577998 + AT_rich Low_complexity Low_complexity 1 29 0 3273 254 72 50 chr17 1860487 1861017 -83577463 - L1MD3 LINE L1 0 8042 7525 1819 124 0 4 chr17 1861017 1861283 -83577197 - AluSg SINE Alu -13 297 33 3273 254 72 50 chr17 1861283 1861700 -83576780 - L1MD3 LINE L1 -517 7525 7119 2177 96 0 34 chr17 1861700 1862023 -83576457 - AluSx SINE Alu 0 312 1 3273 254 72 50 chr17 1862023 1862442 -83576038 - L1MD3 LINE L1 -923 7119 6659 640 187 193 0 chr17 1862447 1862597 -83575883 - MER20 DNA MER1_type -5 214 36 559 297 112 29 chr17 1862639 1862805 -83575675 - L1MC4a LINE L1 -1208 6600 6449 1524 154 37 85 chr17 1862805 1863182 -83575298 + MER46B DNA MER2_type 2 235 -1 559 297 112 29 chr17 1863182 1863643 -83574837 - L1MC4a LINE L1 -1359 6449 5901 1558 127 0 95 chr17 1863645 1863983 -83574497 - AluJo SINE Alu -6 306 1 718 169 73 15 chr17 1863983 1864119 -83574361 - AluJo SINE Alu -167 145 2 1912 125 3 23 chr17 1864119 1864424 -83574056 - AluSx SINE Alu -13 299 1 1149 171 76 36 chr17 1864467 1864718 -83573762 - AluJo SINE Alu -46 266 6 485 245 12 105 chr17 1864734 1864824 -83573656 - L1MC4a LINE L1 -1926 5882 5785 2090 121 0 3 chr17 1864824 1865131 -83573349 + AluSq SINE Alu 1 306 -7 485 245 12 105 chr17 1865131 1865297 -83573183 - L1MC4a LINE L1 -2023 5785 5650 1724 169 10 0 chr17 1865529 1865825 -83572655 + AluJb SINE Alu 1 299 -13 1996 100 18 0 chr17 1865880 1866161 -83572319 + AluSx SINE Alu 1 286 -26 219 36 0 0 chr17 1866161 1866189 -83572291 + (TA)n Simple_repeat Simple_repeat 2 29 0 2010 90 32 0 chr17 1866189 1866468 -83572012 - AluY SINE Alu -23 288 1 826 314 96 80 chr17 1866476 1866990 -83571490 + L1M4 LINE L1 2870 3401 -2745 1657 114 29 0 chr17 1866990 1867236 -83571244 + AluSx SINE Alu 56 308 -4 826 314 96 80 chr17 1867236 1867483 -83570997 + L1M4 LINE L1 3401 3643 -2503 1544 163 56 24 chr17 1867514 1867632 -83570848 + AluSg SINE Alu 1 114 -196 1927 107 6 50 chr17 1867632 1867949 -83570531 + AluSx SINE Alu 1 303 -9 1544 163 56 24 chr17 1867949 1868118 -83570362 + AluSg SINE Alu 114 297 -13 225 310 147 42 chr17 1868119 1868216 -83570264 + L1M4 LINE L1 3695 3780 -2366 2320 102 26 50 chr17 1868216 1868287 -83570193 - THE1C LTR MaLR 0 375 304 2124 82 7 0 chr17 1868287 1868594 -83569886 + AluY SINE Alu 1 309 0 2320 102 26 50 chr17 1868594 1868905 -83569575 - THE1C LTR MaLR -71 304 1 225 310 147 42 chr17 1868905 1868959 -83569521 + L1M4 LINE L1 3780 3827 -2319 1958 137 0 3 chr17 1868959 1869258 -83569222 + AluSx SINE Alu 1 298 -14 225 310 147 42 chr17 1869258 1869560 -83568920 + L1M4 LINE L1 3827 4197 -1949 860 138 13 38 chr17 1869638 1869797 -83568683 + AluSg/x SINE Alu 146 300 -12 1946 123 7 10 chr17 1869855 1870157 -83568323 + AluSx SINE Alu 1 301 -11 246 262 60 27 chr17 1870184 1870333 -83568147 + L1M4 LINE L1 4505 4658 -1488 24 0 0 0 chr17 1870336 1870360 -83568120 + AT_rich Low_complexity Low_complexity 1 24 0 226 189 19 0 chr17 1870592 1870645 -83567835 + L1M4 LINE L1 5115 5168 -978 913 165 215 58 chr17 1870667 1870794 -83567686 + AluJb SINE Alu 1 107 -195 2159 111 0 0 chr17 1870794 1871091 -83567389 + AluSx SINE Alu 1 297 -15 913 165 215 58 chr17 1871091 1871224 -83567256 + AluJb SINE Alu 107 302 0 337 297 96 41 chr17 1871527 1871746 -83566734 - L1 LINE L1 -1034 5112 4882 1899 132 0 26 chr17 1871859 1872169 -83566311 + AluSx SINE Alu 1 302 -10 1875 168 93 26 chr17 1872308 1872694 -83565786 - L1MC2 LINE L1 -71 6273 5855 2386 51 3 16 chr17 1872694 1873005 -83565475 + AluY SINE Alu 1 307 -4 1875 168 93 26 chr17 1873005 1873036 -83565444 - L1MC2 LINE L1 -489 5855 5828 5623 46 3 5 chr17 1873321 1873995 -83564485 + L1PA5 LINE L1 5481 6153 -1 2190 107 3 28 chr17 1874352 1874671 -83563809 - AluY SINE Alu 0 311 1 1904 130 60 0 chr17 1874755 1875039 -83563441 - AluSq SINE Alu -12 301 1 1884 174 0 0 chr17 1875208 1875506 -83562974 - AluJb SINE Alu -14 298 1 657 165 126 77 chr17 1875506 1875688 -83562792 - AluJo SINE Alu -3 309 119 297 0 0 0 chr17 1875748 1875781 -83562699 + (TG)n Simple_repeat Simple_repeat 2 34 0 1456 171 121 11 chr17 1875956 1876220 -83562260 + AluSg SINE Alu 1 293 -17 503 200 0 0 chr17 1876243 1876338 -83562142 + U13 snRNA snRNA 1 95 -9 2328 95 3 10 chr17 1876482 1876788 -83561692 - AluSg SINE Alu -6 304 1 1203 168 25 15 chr17 1876816 1877013 -83561467 + AluJo SINE Alu 83 281 -31 885 96 0 0 chr17 1877494 1877609 -83560871 - AluY SINE Alu -20 291 177 338 268 64 119 chr17 1877627 1877809 -83560671 - L1 LINE L1 -2034 4112 3944 2098 127 3 7 chr17 1877809 1878108 -83560372 - AluSx SINE Alu -14 298 1 338 268 64 119 chr17 1878108 1878160 -83560320 - L1 LINE L1 -2202 3944 3891 2016 133 28 0 chr17 1879536 1879821 -83558659 + AluSx SINE Alu 1 293 -19 2137 102 56 0 chr17 1879821 1880106 -83558374 + AluSc SINE Alu 1 301 -8 1997 126 14 20 chr17 1880115 1880408 -83558072 + AluSx SINE Alu 1 291 -21 6149 90 60 6 chr17 1880795 1882209 -83556271 - L1PA8 LINE L1 0 6172 4675 1593 103 210 4 chr17 1882378 1882630 -83555850 + AluY SINE Alu 1 304 -7 2111 119 0 46 chr17 1882897 1882943 -83555537 - AluSx SINE Alu 0 312 265 414 0 0 0 chr17 1882943 1882989 -83555491 + (TG)n Simple_repeat Simple_repeat 1 46 0 2111 119 0 46 chr17 1882989 1883269 -83555211 - AluSx SINE Alu -47 265 1 2257 106 3 10 chr17 1883393 1883694 -83554786 + AluSp SINE Alu 1 299 -14 1062 104 84 0 chr17 1883695 1883849 -83554631 + AluY SINE Alu 135 301 -10 874 211 0 0 chr17 1883940 1884106 -83554374 - AluJb SINE Alu 0 312 147 2241 110 10 0 chr17 1884266 1884557 -83553923 - AluSg SINE Alu -16 294 1 612 88 0 0 chr17 1884558 1884638 -83553842 - AluSg SINE Alu -224 86 7 1137 141 0 0 chr17 1884808 1884971 -83553509 - AluSp SINE Alu -14 299 137 1850 93 4 0 chr17 1884972 1885208 -83553272 - AluSg SINE Alu -14 296 60 312 27 0 0 chr17 1885230 1885267 -83553213 + (TC)n Simple_repeat Simple_repeat 1 37 0 299 208 0 0 chr17 1885275 1885328 -83553152 + Tigger4(Zombi) DNA MER2_type 2679 2731 0 2448 97 7 0 chr17 1886155 1886464 -83552016 - AluSx SINE Alu -1 311 1 342 231 20 121 chr17 1886974 1887173 -83551307 + MIR SINE MIR 84 262 0 993 67 0 0 chr17 1887790 1887909 -83550571 + AluY SINE Alu 174 292 -19 2110 99 14 3 chr17 1888607 1888891 -83549589 + AluSx SINE Alu 1 287 -25 1915 147 31 0 chr17 1888969 1889255 -83549225 + AluJo SINE Alu 1 295 -17 2310 58 0 7 chr17 1889258 1889533 -83548947 + AluY SINE Alu 1 273 -38 409 293 63 63 chr17 1889638 1889812 -83548668 + L1ME LINE L1 5552 5725 -396 2166 92 27 7 chr17 1889830 1890123 -83548357 - AluSq SINE Alu -14 299 1 248 217 0 36 chr17 1890311 1890394 -83548086 + CT-rich Low_complexity Low_complexity 4 83 0 467 276 173 5 chr17 1891382 1891567 -83546913 + MIR SINE MIR 31 246 -16 2281 83 13 17 chr17 1891756 1892056 -83546424 - AluSg SINE Alu 0 310 12 2267 128 0 0 chr17 1892161 1892467 -83546013 - AluSx SINE Alu -6 306 1 1810 165 0 49 chr17 1892550 1892877 -83545603 + AluJo SINE Alu 1 311 -1 2335 102 7 0 chr17 1893352 1893647 -83544833 + AluSq SINE Alu 1 297 -16 2740 36 0 0 chr17 1893922 1894229 -83544251 + AluY SINE Alu 1 307 -4 22 0 0 0 chr17 1895241 1895263 -83543217 + AT_rich Low_complexity Low_complexity 1 22 0 606 223 0 15 chr17 1895427 1895557 -83542923 + FLAM_A SINE Alu 5 132 -1 2031 136 10 7 chr17 1895572 1895867 -83542613 - AluSx SINE Alu -16 296 1 846 83 101 0 chr17 1896089 1896198 -83542282 + AluJo SINE Alu 6 125 -187 1132 152 0 17 chr17 1896239 1896417 -83542063 + AluJo SINE Alu 120 294 -18 2227 106 0 28 chr17 1896656 1896976 -83541504 + AluSx SINE Alu 1 311 -1 2427 54 34 3 chr17 1897445 1897739 -83540741 + AluY SINE Alu 1 303 -8 2440 71 0 0 chr17 1898137 1898456 -83540024 + AluY SINE Alu 1 311 0 2235 118 0 31 chr17 1898539 1898684 -83539796 + AluSx SINE Alu 1 149 -163 2345 90 10 3 chr17 1898684 1898984 -83539496 + AluSp SINE Alu 1 302 -11 2235 118 0 31 chr17 1898984 1899160 -83539320 + AluSx SINE Alu 149 312 0 1710 163 41 34 chr17 1899170 1899464 -83539016 + AluJo SINE Alu 1 296 -16 737 240 12 6 chr17 1899475 1899646 -83538834 + MER3 DNA MER1_type 38 209 0 1146 112 0 0 chr17 1899890 1900236 -83538244 + (TGGA)n Simple_repeat Simple_repeat 1 346 0 595 275 128 32 chr17 1900245 1900652 -83537828 - L1MC4 LINE L1 -48 7994 7549 242 299 126 0 chr17 1901393 1901480 -83537000 + MIR SINE MIR 153 250 -12 2165 131 3 0 chr17 1901520 1901817 -83536663 + 7SLRNA srpRNA srpRNA 18 315 -5 1159 129 20 65 chr17 1902052 1902253 -83536227 - AluJb SINE Alu -34 278 87 186 43 0 0 chr17 1904125 1904148 -83534332 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 261 0 0 0 chr17 1906187 1906216 -83532264 + (T)n Simple_repeat Simple_repeat 1 29 0 853 98 0 8 chr17 1906565 1906698 -83531782 + FLAM_C SINE Alu 2 133 0 1992 143 10 10 chr17 1907013 1907321 -83531159 + AluSq SINE Alu 1 308 -5 308 258 153 31 chr17 1907654 1907817 -83530663 + MER5A DNA MER1_type 7 189 0 2357 103 0 0 chr17 1907916 1908217 -83530263 - AluSg SINE Alu -9 301 1 2116 104 0 11 chr17 1908539 1908818 -83529662 - AluSq SINE Alu -37 276 1 2083 101 3 0 chr17 1911846 1912133 -83526347 + AluSg SINE Alu 1 288 -22 304 30 60 30 chr17 1912495 1912562 -83525918 + (CCCCCG)n Simple_repeat Simple_repeat 5 73 0 1704 130 0 0 chr17 1913731 1913984 -83524496 + AluSx SINE Alu 54 306 0 2444 74 7 3 chr17 1917682 1917981 -83520499 + AluSp SINE Alu 1 300 -13 180 138 0 0 chr17 1919280 1919309 -83519171 + MIR SINE MIR 117 145 -117 2177 106 0 10 chr17 1919326 1919618 -83518862 + AluSx SINE Alu 1 289 -23 1870 147 0 14 chr17 1919899 1920192 -83518288 - AluJb SINE Alu -23 289 1 2356 104 0 0 chr17 1920196 1920494 -83517986 - AluSg SINE Alu -12 298 1 2444 88 0 3 chr17 1923382 1923690 -83514790 - AluSq SINE Alu -6 307 1 344 312 33 45 chr17 1924508 1924684 -83513796 - MIR3 SINE MIR 0 208 35 245 260 146 32 chr17 1924750 1924873 -83513607 + MIR SINE MIR 47 184 -24 187 291 157 22 chr17 1926868 1927002 -83511478 - MIR3 SINE MIR -34 174 23 236 219 31 31 chr17 1929053 1929117 -83509363 - MIR SINE MIR -118 144 81 306 186 4 35 chr17 1930688 1930772 -83507708 + MIR SINE MIR 49 126 -82 214 158 42 63 chr17 1932066 1932161 -83506319 + (CCCG)n Simple_repeat Simple_repeat 4 96 0 225 226 312 0 chr17 1932918 1933004 -83505476 - MIR SINE MIR -49 159 49 1631 106 21 100 chr17 1933408 1933736 -83504744 + AluJo SINE Alu 1 302 -10 2338 67 7 0 chr17 1933736 1934034 -83504446 + AluSq SINE Alu 1 300 -13 358 246 40 43 chr17 1934065 1934232 -83504248 + L1MC4 LINE L1 1959 6985 -1337 260 254 103 11 chr17 1934256 1934437 -83504043 - L1MC4a LINE L1 -507 5826 5729 2016 135 26 0 chr17 1934611 1934914 -83503566 + AluJb SINE Alu 1 311 -1 2087 103 3 0 chr17 1935038 1935328 -83503152 - AluSx SINE Alu -21 291 1 484 286 0 0 chr17 1935405 1935531 -83502949 + MER94 DNA DNA 1 126 -8 2299 93 3 0 chr17 1935568 1935870 -83502610 - AluSg SINE Alu -7 303 1 195 411 56 0 chr17 1935873 1935963 -83502517 + L2 LINE L2 3155 3249 -23 960 195 0 0 chr17 1935968 1936137 -83502343 - FRAM SINE Alu -4 172 4 1723 75 6 177 chr17 1936263 1936630 -83501850 - AluSp SINE Alu 0 308 1 2152 110 7 0 chr17 1936915 1937223 -83501257 + AluSx SINE Alu 1 310 -2 335 194 10 126 chr17 1937678 1937746 -83500734 + MIR3 SINE MIR 112 186 -22 1784 124 10 59 chr17 1937746 1938052 -83500428 + AluSx SINE Alu 1 291 -21 2328 71 7 0 chr17 1938053 1938348 -83500132 + AluY SINE Alu 1 297 -14 335 194 10 126 chr17 1938348 1938380 -83500100 + MIR3 SINE MIR 185 202 -6 2120 136 0 0 chr17 1938475 1938783 -83499697 - AluSx SINE Alu -4 308 1 241 195 0 0 chr17 1939052 1939093 -83499387 + Alu SINE Alu 239 279 -22 636 171 0 18 chr17 1939147 1939258 -83499222 + FLAM_A SINE Alu 20 128 -14 2035 122 30 0 chr17 1939259 1939563 -83498917 + AluSp SINE Alu 1 313 0 516 210 129 47 chr17 1939588 1939700 -83498780 - MLT1K LTR MaLR -66 522 421 2191 107 0 7 chr17 1939700 1940008 -83498472 - AluSg SINE Alu -4 306 1 516 210 129 47 chr17 1940008 1940128 -83498352 - MLT1K LTR MaLR -167 421 271 288 299 13 0 chr17 1940186 1940263 -83498217 - MLT1K LTR MaLR -318 270 193 2204 97 7 3 chr17 1940898 1941196 -83497284 - AluSx SINE Alu -13 299 1 2489 53 0 3 chr17 1943751 1944055 -83494425 - AluSq SINE Alu -10 303 1 27 116 0 0 chr17 1945142 1945288 -83493192 + GC_rich Low_complexity Low_complexity 1 146 0 2173 93 0 31 chr17 1945655 1945976 -83492504 + AluSx SINE Alu 1 311 -1 551 320 82 42 chr17 1946142 1946520 -83491960 - L2 LINE L2 -1 3271 2879 2147 84 3 72 chr17 1946551 1946747 -83491733 - AluSx SINE Alu -3 309 144 2360 60 0 17 chr17 1946747 1947046 -83491434 - AluY SINE Alu -17 294 1 2147 84 3 72 chr17 1947046 1947181 -83491299 - AluSx SINE Alu -168 144 1 2048 108 10 14 chr17 1947181 1947477 -83491003 - AluSg SINE Alu -15 295 1 1433 168 119 0 chr17 1947478 1947746 -83490734 - AluJo SINE Alu -12 300 1 591 328 6 0 chr17 1947796 1947973 -83490507 + MER5B DNA MER1_type 1 178 0 2386 90 0 6 chr17 1948108 1948420 -83490060 + AluSg SINE Alu 1 310 0 802 145 0 36 chr17 1948450 1948588 -83489892 + FRAM SINE Alu 28 160 -16 1435 174 68 14 chr17 1948609 1948890 -83489590 + AluJb SINE Alu 1 296 -16 2449 49 13 0 chr17 1948890 1949196 -83489284 + AluY SINE Alu 1 310 -1 24 0 0 0 chr17 1949592 1949616 -83488864 + AT_rich Low_complexity Low_complexity 1 24 0 806 168 0 0 chr17 1949617 1949736 -83488744 - FLAM_C SINE Alu -24 119 1 2209 88 0 13 chr17 1949773 1950079 -83488401 + AluSx SINE Alu 1 302 -10 681 196 55 0 chr17 1950200 1950363 -83488117 - L1MB2 LINE L1 -5 6166 5995 263 283 0 0 chr17 1950707 1950767 -83487713 + MER91A DNA MER1_type 4 63 -133 216 200 59 82 chr17 1950801 1950886 -83487594 + MER91A DNA MER1_type 18 100 -96 378 0 0 0 chr17 1951086 1951128 -83487352 + (TG)n Simple_repeat Simple_repeat 1 42 0 216 0 0 0 chr17 1951127 1951151 -83487329 + (GA)n Simple_repeat Simple_repeat 1 24 0 * 543 207 18 0 chr17 1952532 1952643 -83485837 + MIR SINE MIR 80 192 -70 2148 118 0 0 chr17 1952999 1953296 -83485184 + AluSx SINE Alu 1 297 -15 2462 47 0 10 chr17 1953296 1953642 -83484838 + AluY SINE Alu 1 311 0 2541 58 3 0 chr17 1953813 1954123 -83484357 - AluSp SINE Alu -2 311 1 2442 76 0 6 chr17 1954309 1954624 -83483856 - AluSp SINE Alu 0 313 1 253 299 29 135 chr17 1954699 1954973 -83483507 + L2 LINE L2 2919 3163 -109 2206 99 3 0 chr17 1955059 1955352 -83483128 - AluY SINE Alu -17 294 1 190 211 0 0 chr17 1955928 1955966 -83482514 - MIR SINE MIR -61 147 110 2195 115 0 0 chr17 1955997 1956293 -83482187 - AluSx SINE Alu -14 298 3 554 236 38 25 chr17 1956358 1956515 -83481965 + MIR3 SINE MIR 35 193 -15 2072 108 3 0 chr17 1956712 1956999 -83481481 + AluSg SINE Alu 1 288 -22 216 0 0 0 chr17 1956999 1957023 -83481457 + (TTAAA)n Simple_repeat Simple_repeat 2 25 0 809 164 0 0 chr17 1957029 1957151 -83481329 + FLAM_C SINE Alu 1 122 -21 1959 122 10 10 chr17 1957163 1957520 -83480960 + AluSx SINE Alu 1 312 0 2466 48 10 16 chr17 1958027 1958340 -83480140 - AluY SINE Alu 0 311 1 582 207 38 44 chr17 1958613 1958637 -83479843 + MIR SINE MIR 32 55 -207 1545 158 15 8 chr17 1958637 1958902 -83479578 - AluJo SINE Alu -45 267 1 582 207 38 44 chr17 1958902 1959052 -83479428 + MIR SINE MIR 55 208 -54 2302 41 48 3 chr17 1959055 1959348 -83479132 + AluY SINE Alu 1 306 -5 2161 112 0 0 chr17 1959353 1959648 -83478832 + AluSx SINE Alu 1 295 -17 2330 87 0 3 chr17 1959650 1959960 -83478520 + AluSc SINE Alu 1 309 0 2258 74 3 7 chr17 1959963 1960251 -83478229 + AluY SINE Alu 1 289 -22 299 25 25 0 chr17 1960251 1960291 -83478189 + (TAGA)n Simple_repeat Simple_repeat 4 44 0 534 256 107 66 chr17 1960415 1960704 -83477776 - L2 LINE L2 -2 3311 3011 1124 164 100 9 chr17 1960711 1960942 -83477538 + MLT1E1 LTR MaLR 1 252 -402 2235 112 0 3 chr17 1960944 1961257 -83477223 + AluSx SINE Alu 1 312 0 531 173 11 8 chr17 1961319 1961333 -83477147 + MLT1E LTR MaLR 357 369 -224 1455 142 9 0 chr17 1961333 1961559 -83476921 + AluJb SINE Alu 84 311 -1 531 173 11 8 chr17 1961559 1961660 -83476820 + MLT1E LTR MaLR 369 593 0 250 211 111 11 chr17 1961660 1961750 -83476730 - L2 LINE L2 -258 3014 2916 267 281 0 0 chr17 1961763 1961827 -83476653 - MIR SINE MIR 0 262 199 * 292 350 54 39 chr17 1961825 1961959 -83476521 - L2 LINE L2 -400 2914 2775 2043 110 0 32 chr17 1961959 1962156 -83476324 + AluSx SINE Alu 1 186 -126 2397 73 0 0 chr17 1962156 1962456 -83476024 - AluY SINE Alu -11 300 1 2043 110 0 32 chr17 1962456 1962568 -83475912 + AluSx SINE Alu 186 300 -12 292 350 54 39 chr17 1962568 1962636 -83475844 - L2 LINE L2 -539 2775 2709 1217 153 14 5 chr17 1962639 1962848 -83475632 - AluJo SINE Alu -15 297 87 676 304 57 18 chr17 1962853 1963133 -83475347 - L2 LINE L2 -604 2710 2420 2160 256 88 41 chr17 1963179 1963712 -83474768 + L2 LINE L2 2153 2660 -653 2251 92 0 3 chr17 1963712 1964015 -83474465 + AluSx SINE Alu 1 302 -10 2160 256 88 41 chr17 1964015 1964427 -83474053 + L2 LINE L2 2660 3051 -262 2235 101 0 10 chr17 1964427 1964734 -83473746 - AluSg SINE Alu 0 310 7 2160 256 88 41 chr17 1964734 1964751 -83473729 + L2 LINE L2 3051 3066 -247 1004 161 105 115 chr17 1964751 1965056 -83473424 - AluJo SINE Alu 0 302 1 2160 256 88 41 chr17 1965056 1965203 -83473277 + L2 LINE L2 3066 3312 -1 252 234 110 69 chr17 1965196 1965341 -83473139 - L2 LINE L2 -887 2427 2277 * 1882 133 16 35 chr17 1965345 1965661 -83472819 + AluJb SINE Alu 3 312 0 201 322 0 0 chr17 1965718 1965805 -83472675 + (TG)n Simple_repeat Simple_repeat 2 88 0 2278 119 0 0 chr17 1966534 1966846 -83471634 - AluSq SINE Alu -1 312 1 2202 85 3 3 chr17 1967243 1967536 -83470944 - AluSx SINE Alu -19 293 1 2097 122 0 0 chr17 1968009 1968303 -83470177 + AluSq SINE Alu 1 294 -19 519 273 60 11 chr17 1968421 1968604 -83469876 - MIR SINE MIR -3 259 68 273 280 63 63 chr17 1968837 1969012 -83469468 + L2 LINE L2 3005 3179 -134 330 67 0 0 chr17 1969066 1969111 -83469369 + (TG)n Simple_repeat Simple_repeat 1 45 0 181 277 21 0 chr17 1969123 1969170 -83469310 + L2 LINE L2 3180 3227 -86 331 308 0 0 chr17 1970229 1970349 -83468131 + G-rich Low_complexity Low_complexity 1 120 0 341 195 146 0 chr17 1970646 1970728 -83467752 + MIR SINE MIR 33 126 -82 2082 89 13 13 chr17 1970834 1971137 -83467343 + AluSx SINE Alu 1 303 -9 418 144 10 96 chr17 1971269 1971373 -83467107 + MIR SINE MIR 128 222 -40 1955 142 0 0 chr17 1971792 1972102 -83466378 + AluSg SINE Alu 1 310 0 506 306 44 16 chr17 1972468 1972651 -83465829 + MIR SINE MIR 35 222 -40 2112 110 0 0 chr17 1972731 1973048 -83465432 - AluSx SINE Alu 0 317 1 2076 139 0 3 chr17 1973049 1973351 -83465129 - AluSx SINE Alu -11 301 1 1023 189 0 0 chr17 1973365 1973540 -83464940 - AluJo/FRAM SINE Alu -1 311 137 1789 138 14 3 chr17 1973540 1973822 -83464658 - AluJb SINE Alu -5 307 23 472 246 154 11 chr17 1973953 1974128 -83464352 - MIR SINE MIR -49 213 14 244 184 0 20 chr17 1974340 1974389 -83464091 - LTR33 LTR ERVL 0 521 474 1692 104 0 0 chr17 1974395 1974616 -83463864 + AluSq SINE Alu 1 221 -92 1120 45 0 8 chr17 1974616 1974750 -83463730 - AluSc SINE Alu -176 133 1 689 108 0 0 chr17 1974751 1974853 -83463627 - L1M3 LINE L1 -378 5793 5692 187 43 0 0 chr17 1974859 1974882 -83463598 + (TTTTC)n Simple_repeat Simple_repeat 2 145 0 2239 52 0 25 chr17 1974882 1975168 -83463312 - AluY SINE Alu -1 307 7 206 32 32 0 chr17 1975206 1975237 -83463243 + (TA)n Simple_repeat Simple_repeat 2 33 0 958 177 6 6 chr17 1975239 1975397 -83463083 - FAM SINE Alu -17 158 1 308 353 24 65 chr17 1975405 1975575 -83462905 - L1 LINE L1 -943 5203 5041 2362 62 7 3 chr17 1975580 1975888 -83462592 - AluSg SINE Alu -1 309 1 29 78 0 0 chr17 1976147 1976211 -83462269 + GC_rich Low_complexity Low_complexity 1 64 0 23 0 0 0 chr17 1976284 1976307 -83462173 + GC_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr17 1976338 1976360 -83462120 + GC_rich Low_complexity Low_complexity 1 22 0 378 254 82 22 chr17 1977348 1977482 -83460998 - MIR SINE MIR -90 172 31 2057 126 0 10 chr17 1977681 1977982 -83460498 - AluJb SINE Alu -10 302 5 353 301 16 8 chr17 1978053 1978176 -83460304 + MLT1K LTR MaLR 174 297 -291 2399 64 0 0 chr17 1978438 1978733 -83459747 - AluY SINE Alu -16 295 1 2017 127 3 0 chr17 1978746 1979037 -83459443 - AluSg SINE Alu -18 292 1 486 265 7 26 chr17 1979277 1979428 -83459052 - MLT1K LTR MaLR -3 585 438 1455 150 7 66 chr17 1979431 1979704 -83458776 - AluJo SINE Alu -55 257 1 524 331 38 44 chr17 1979710 1979843 -83458637 - L1MC/D LINE L1 -2030 5778 5646 1727 164 23 13 chr17 1979843 1980012 -83458468 - AluJb SINE Alu -10 302 127 2370 92 0 0 chr17 1980012 1980315 -83458165 - AluSq SINE Alu -10 303 1 1727 164 23 13 chr17 1980315 1980444 -83458036 - AluJb SINE Alu -185 127 1 524 331 38 44 chr17 1980444 1980654 -83457826 - L1MC/D LINE L1 -2162 5646 5437 1881 56 0 0 chr17 1980656 1980887 -83457593 + AluY SINE Alu 81 311 0 2292 90 0 0 chr17 1980915 1981205 -83457275 - AluSx SINE Alu -22 290 1 1334 162 15 19 chr17 1981236 1981507 -83456973 - L1MC3 LINE L1 -200 7585 7316 2170 128 0 0 chr17 1981507 1981819 -83456661 - AluSq SINE Alu -1 312 1 2305 96 3 6 chr17 1981838 1982152 -83456328 - AluSp SINE Alu 0 313 1 467 196 10 0 chr17 1982191 1982288 -83456192 + MER2 DNA MER2_type 1 98 -247 1330 163 0 50 chr17 1982359 1982542 -83455938 - L1M4 LINE L1 -641 5543 5377 2498 65 3 0 chr17 1982542 1982851 -83455629 - AluY SINE Alu -1 310 1 1330 163 0 50 chr17 1982851 1982949 -83455531 - L1M4 LINE L1 -807 5377 5276 2100 111 13 25 chr17 1982951 1983266 -83455214 - AluSx SINE Alu -1 311 1 294 179 0 0 chr17 1983267 1983323 -83455157 - MLT1A2 LTR MaLR -318 56 1 1270 173 5 0 chr17 1983338 1983540 -83454940 - AluJo SINE Alu -109 203 1 2165 125 0 0 chr17 1983978 1984290 -83454190 + AluSx SINE Alu 1 312 0 329 314 8 42 chr17 1984528 1984646 -83453834 + MIR3 SINE MIR 85 198 -10 2104 100 28 0 chr17 1984714 1985005 -83453475 + AluSx SINE Alu 1 299 -13 2373 97 0 0 chr17 1985005 1985315 -83453165 + AluSg SINE Alu 1 310 0 310 338 116 0 chr17 1985703 1985901 -83452579 + L2 LINE L2 2341 2561 -753 776 148 49 0 chr17 1985904 1986026 -83452454 + FLAM_A SINE Alu 1 128 -5 2305 64 0 14 chr17 1986026 1986321 -83452159 + AluY SINE Alu 5 295 -16 1447 107 0 10 chr17 1986328 1986553 -83451927 + AluSg/x SINE Alu 80 302 0 212 342 53 0 chr17 1986553 1986629 -83451851 + L2 LINE L2 2643 2722 -592 1487 171 67 56 chr17 1986800 1986923 -83451557 + MLT1A1 LTR MaLR 1 121 -244 1706 114 103 0 chr17 1986923 1987185 -83451295 + AluSg SINE Alu 3 291 -19 1487 171 67 56 chr17 1987185 1987418 -83451062 + MLT1A1 LTR MaLR 121 361 -4 191 292 0 0 chr17 1987433 1987481 -83450999 + L2 LINE L2 3000 3047 -225 2315 98 7 0 chr17 1987646 1987952 -83450528 + AluSg SINE Alu 1 308 -2 706 276 59 118 chr17 1988166 1988302 -83450178 - L1MC4a LINE L1 -1915 5893 5751 2154 92 14 7 chr17 1988302 1988596 -83449884 - AluY SINE Alu -15 296 1 706 276 59 118 chr17 1988596 1988864 -83449616 - L1MC4a LINE L1 -2057 5751 5513 197 262 0 0 chr17 1988914 1988956 -83449524 + L2 LINE L2 3168 3209 -63 2251 102 0 0 chr17 1988974 1989277 -83449203 + AluSq SINE Alu 1 303 -10 1858 167 0 16 chr17 1989509 1989826 -83448654 + AluJo SINE Alu 1 312 0 2436 35 0 0 chr17 1989840 1990187 -83448293 + AluY SINE Alu 3 349 0 339 223 16 144 chr17 1990258 1990356 -83448124 - L3 LINE CR1 -111 1466 1402 2297 106 0 0 chr17 1990356 1990667 -83447813 + AluSx SINE Alu 2 312 0 339 223 16 144 chr17 1990667 1990756 -83447724 - L3 LINE CR1 -175 1402 1303 2133 120 0 19 chr17 1991323 1991681 -83446799 + AluSx SINE Alu 1 352 0 2263 100 13 0 chr17 1992045 1992354 -83446126 - AluSq SINE Alu 0 313 1 540 169 0 0 chr17 1992468 1992551 -83445929 - FLAM_A SINE Alu -16 126 44 1967 114 11 4 chr17 1992558 1992838 -83445642 - AluSq SINE Alu -17 296 15 1541 173 23 36 chr17 1992852 1993159 -83445321 - AluJo SINE Alu -9 303 1 639 209 162 16 chr17 1993166 1993357 -83445123 - MIR SINE MIR -13 249 31 1997 99 75 3 chr17 1993410 1993702 -83444778 - AluSq SINE Alu 0 313 1 465 376 110 38 chr17 1993704 1994241 -83444239 + L3 LINE CR1 186 683 -894 186 43 0 0 chr17 1994241 1994264 -83444216 + (TTCA)n Simple_repeat Simple_repeat 3 25 0 465 376 110 38 chr17 1994264 1994290 -83444190 + L3 LINE CR1 683 706 -871 2246 80 7 0 chr17 1994290 1994622 -83443858 - AluSq SINE Alu 0 334 1 465 376 110 38 chr17 1994622 1994856 -83443624 + L3 LINE CR1 706 1044 -533 182 383 0 0 chr17 1994892 1994952 -83443528 - L2 LINE L2 -1 3271 3212 1971 103 41 3 chr17 1995045 1995335 -83443145 - AluSx SINE Alu -11 301 1 2098 121 0 35 chr17 1995381 1995696 -83442784 - AluSx SINE Alu -8 304 1 508 290 55 84 chr17 1995775 1996154 -83442326 - L2 LINE L2 -80 3233 2866 451 333 82 0 chr17 1996189 1996384 -83442096 + L3 LINE CR1 1343 1553 -24 2283 73 0 0 chr17 1996461 1996749 -83441731 + AluSx SINE Alu 1 288 -24 204 217 0 17 chr17 1997259 1997319 -83441161 + (CGG)n Simple_repeat Simple_repeat 3 61 0 321 26 0 0 chr17 1997388 1997426 -83441054 + (GGA)n Simple_repeat Simple_repeat 1 38 0 338 243 0 0 chr17 1998509 1998612 -83439868 + GA-rich Low_complexity Low_complexity 2 104 0 230 345 12 12 chr17 1999190 1999274 -83439206 + MIR SINE MIR 2 85 -177 310 197 33 0 chr17 1999763 1999824 -83438656 + MIR SINE MIR 74 136 -72 227 357 0 18 chr17 1999892 2000004 -83438476 + L3 LINE CR1 1443 1552 -25 2242 88 0 0 chr17 2000620 2000914 -83437566 - AluSp SINE Alu -18 295 2 403 315 0 0 chr17 2002099 2002533 -83435947 + (TG)n Simple_repeat Simple_repeat 1 434 0 659 184 15 167 chr17 2003158 2003298 -83435182 - MIR SINE MIR -1 261 183 2188 98 0 3 chr17 2003298 2003593 -83434887 + AluSx SINE Alu 1 294 -18 659 184 15 167 chr17 2003593 2003740 -83434740 - MIR SINE MIR -79 183 15 303 325 149 24 chr17 2003765 2004020 -83434460 + L2 LINE L2 3013 3299 -14 192 40 0 0 chr17 2004020 2004045 -83434435 + (TGAA)n Simple_repeat Simple_repeat 4 28 0 303 227 30 0 chr17 2004111 2004177 -83434303 + MIR SINE MIR 5 72 -190 989 198 160 55 chr17 2004178 2004521 -83433959 - MLT1G1 LTR MaLR 0 595 217 2122 117 0 7 chr17 2004530 2004837 -83433643 - AluSg SINE Alu -5 305 1 2237 101 0 0 chr17 2004839 2005135 -83433345 - AluSx SINE Alu -16 296 1 1674 198 36 51 chr17 2005948 2006363 -83432117 + LTR2 LTR ERV1 41 449 0 229 170 0 21 chr17 2006364 2006411 -83432069 + MIR SINE MIR 85 130 -78 2345 73 3 0 chr17 2006464 2006765 -83431715 - AluSq SINE Alu -11 302 1 353 301 58 0 chr17 2006776 2006879 -83431601 - MIR SINE MIR -68 140 32 2140 100 0 28 chr17 2007190 2007511 -83430969 - AluSx SINE Alu 0 312 1 2132 95 10 7 chr17 2007511 2007815 -83430665 - AluSx SINE Alu -7 305 1 1585 186 34 3 chr17 2007819 2008114 -83430366 - AluJo SINE Alu -2 310 7 2311 94 0 0 chr17 2008124 2008431 -83430049 - AluY SINE Alu -4 307 1 322 874 0 27 chr17 2008435 2008728 -83429752 - L1MC4a LINE L1 -232 5889 5542 2381 147 112 68 chr17 2008728 2008792 -83429688 - MLT2B1 LTR ERVL 0 520 460 195 42 0 0 chr17 2008792 2008816 -83429664 + (TG)n Simple_repeat Simple_repeat 2 25 0 2381 147 112 68 chr17 2008816 2008858 -83429622 - MLT2B1 LTR ERVL -60 460 421 1927 122 0 45 chr17 2008858 2009170 -83429310 - AluSx SINE Alu -10 302 5 2381 147 112 68 chr17 2009170 2009560 -83428920 - MLT2B1 LTR ERVL -99 421 1 322 874 0 27 chr17 2009560 2009578 -83428902 - L1MC4a LINE L1 -578 5543 5572 1804 123 39 7 chr17 2009627 2009911 -83428569 - AluJb SINE Alu -18 294 2 1738 114 0 70 chr17 2010078 2010376 -83428104 + AluSx SINE Alu 36 312 0 2125 101 7 23 chr17 2010675 2010983 -83427497 - AluSx SINE Alu -9 303 1 181 373 127 0 chr17 2011015 2011133 -83427347 - MIR3 SINE MIR -30 178 46 2103 118 0 0 chr17 2011490 2011786 -83426694 + AluSx SINE Alu 4 299 -13 407 276 135 0 chr17 2012120 2012276 -83426204 + MIR SINE MIR 79 255 -7 2290 106 0 0 chr17 2012413 2012724 -83425756 - AluSx SINE Alu -1 311 1 366 161 0 0 chr17 2012957 2013019 -83425461 - MIR SINE MIR -116 146 85 2361 87 0 0 chr17 2013718 2014018 -83424462 - AluSq SINE Alu -13 300 1 191 365 54 0 chr17 2014074 2014148 -83424332 + L2 LINE L2 3168 3245 -27 341 313 29 34 chr17 2014220 2014383 -83424097 - MLT1K LTR MaLR -4 584 421 2068 89 38 0 chr17 2014383 2014674 -83423806 + AluSx SINE Alu 1 302 -10 341 313 29 34 chr17 2014674 2014718 -83423762 - MLT1K LTR MaLR -167 421 378 2336 102 0 3 chr17 2015428 2015742 -83422738 - AluSq SINE Alu 0 313 1 183 288 51 17 chr17 2015889 2015948 -83422532 - L2 LINE L2 -21 3251 3191 219 318 6 35 chr17 2016324 2016494 -83421986 + (TG)n Simple_repeat Simple_repeat 1 165 0 213 238 0 0 chr17 2017443 2017523 -83420957 + (TG)n Simple_repeat Simple_repeat 1 80 0 186 150 0 0 chr17 2017606 2017646 -83420834 + (TG)n Simple_repeat Simple_repeat 1 40 0 222 234 234 0 chr17 2018831 2018925 -83419555 + L2 LINE L2 3147 3262 -10 328 358 20 35 chr17 2019456 2019657 -83418823 + MIR SINE MIR 11 208 -54 279 331 24 0 chr17 2020150 2020277 -83418203 + (ATGGTG)n Simple_repeat Simple_repeat 2 131 0 395 214 0 11 chr17 2020803 2020892 -83417588 + MIR SINE MIR 92 179 -83 2289 107 0 0 chr17 2021404 2021712 -83416768 - AluSc SINE Alu -1 308 1 2338 95 0 0 chr17 2021757 2022061 -83416419 + AluSx SINE Alu 1 304 -8 474 18 0 0 chr17 2022159 2022214 -83416266 + (TG)n Simple_repeat Simple_repeat 1 55 0 609 202 82 109 chr17 2022396 2022567 -83415913 + L1MC5 LINE L1 7548 7722 -239 1579 144 7 22 chr17 2022567 2022837 -83415643 - AluJb SINE Alu -46 266 1 609 202 82 109 chr17 2022837 2023041 -83415439 + L1MC5 LINE L1 7722 7913 -48 2146 110 0 0 chr17 2023355 2023645 -83414835 - AluSx SINE Alu -22 290 1 1567 216 37 41 chr17 2025457 2025549 -83412931 + MER113 DNA MER1_type? 17 108 -413 1898 115 3 11 chr17 2025549 2025835 -83412645 + AluSx SINE Alu 1 284 -28 208 0 0 0 chr17 2025835 2025858 -83412622 + (TAAA)n Simple_repeat Simple_repeat 2 136 0 1567 216 37 41 chr17 2025858 2026227 -83412253 + MER113 DNA MER1_type? 108 477 -44 262 140 21 97 chr17 2027477 2027579 -83410901 + C-rich Low_complexity Low_complexity 1 94 0 22 70 0 0 chr17 2027666 2027709 -83410771 + GC_rich Low_complexity Low_complexity 1 43 0 49 76 0 0 chr17 2027725 2027830 -83410650 + GC_rich Low_complexity Low_complexity 1 105 0 237 239 18 46 chr17 2027897 2028006 -83410474 + C-rich Low_complexity Low_complexity 3 108 0 205 186 0 0 chr17 2028830 2028873 -83409607 + T-rich Low_complexity Low_complexity 2 44 0 210 37 0 0 chr17 2029108 2029135 -83409345 + (CCCCCA)n Simple_repeat Simple_repeat 4 30 0 778 85 0 77 chr17 2029592 2029722 -83408758 + FLAM_C SINE Alu 11 130 -13 769 242 128 33 chr17 2030272 2030377 -83408103 + MER113 DNA MER1_type? 1 95 -426 2111 105 13 0 chr17 2030377 2030683 -83407797 - AluSq SINE Alu -3 310 1 2292 79 0 7 chr17 2030692 2030996 -83407484 - AluY SINE Alu -9 302 1 769 242 128 33 chr17 2030996 2031163 -83407317 + MER113 DNA MER1_type? 102 252 -269 2512 50 0 0 chr17 2031163 2031463 -83407017 + AluY SINE Alu 1 300 -11 769 242 128 33 chr17 2031463 2031568 -83406912 + MER113 DNA MER1_type? 252 426 -95 2105 108 3 13 chr17 2032649 2032964 -83405516 + AluSx SINE Alu 1 312 0 2344 70 0 0 chr17 2034157 2034459 -83404021 + AluSg SINE Alu 2 303 -7 643 308 25 5 chr17 2034629 2034827 -83403653 + MIR SINE MIR 1 202 -60 1165 129 0 6 chr17 2034865 2035058 -83403422 + AluSg/x SINE Alu 113 304 0 710 227 178 58 chr17 2035060 2035260 -83403220 + L1ME2 LINE L1 5722 5897 -267 2017 126 0 3 chr17 2035260 2035561 -83402919 - AluSg SINE Alu -10 300 1 2047 111 0 0 chr17 2035569 2035882 -83402598 - AluSg SINE Alu 0 313 1 710 227 178 58 chr17 2035882 2036036 -83402444 + L1ME2 LINE L1 5903 6130 -34 2149 103 0 0 chr17 2036037 2036329 -83402151 + AluSx SINE Alu 18 309 -3 2354 80 0 0 chr17 2037143 2037454 -83401026 + AluY SINE Alu 1 311 0 2219 93 7 3 chr17 2037876 2038178 -83400302 + AluSx SINE Alu 1 303 -9 269 294 59 112 chr17 2038219 2038505 -83399975 + L2 LINE L2 3025 3295 -18 216 208 75 0 chr17 2038510 2038563 -83399917 + GA-rich Low_complexity Low_complexity 1 57 0 2210 66 0 0 chr17 2038910 2039182 -83399298 - AluSx SINE Alu -7 305 34 2373 60 0 10 chr17 2039857 2040159 -83398321 + AluY SINE Alu 1 299 -12 22 0 0 0 chr17 2040249 2040271 -83398209 + AT_rich Low_complexity Low_complexity 1 22 0 1140 123 0 0 chr17 2040280 2040450 -83398030 - AluSq SINE Alu -3 310 141 2087 115 0 0 chr17 2040452 2040747 -83397733 - AluJb SINE Alu -17 295 1 661 154 89 8 chr17 2040815 2040938 -83397542 + FLAM_A SINE Alu 1 133 0 1733 185 70 108 chr17 2040963 2041000 -83397480 + L1MC3 LINE L1 7174 7211 -574 2022 110 3 31 chr17 2041000 2041319 -83397161 + AluSx SINE Alu 1 310 -2 1733 185 70 108 chr17 2041319 2041427 -83397053 + L1MC3 LINE L1 7211 7322 -463 1878 66 8 0 chr17 2041427 2041669 -83396811 + AluSp SINE Alu 63 306 -7 1733 185 70 108 chr17 2041669 2042122 -83396358 + L1MC3 LINE L1 7322 7750 -35 2182 110 0 22 chr17 2042123 2042442 -83396038 - AluSx SINE Alu 0 312 1 1091 188 21 52 chr17 2042478 2042766 -83395714 + MER113 DNA MER1_type? 200 478 -43 2307 97 0 3 chr17 2043145 2043456 -83395024 + AluSg SINE Alu 1 310 0 311 307 11 0 chr17 2043468 2043556 -83394924 - MIR SINE MIR -112 150 62 2254 93 0 0 chr17 2043557 2043858 -83394622 + AluY SINE Alu 1 301 -10 882 270 34 142 chr17 2044003 2044192 -83394288 + MLT1K LTR MaLR 16 224 -364 1850 160 0 0 chr17 2044192 2044485 -83393995 - AluJb SINE Alu -10 302 10 882 270 34 142 chr17 2044485 2044795 -83393685 + MLT1K LTR MaLR 224 439 -149 1911 138 0 0 chr17 2044795 2045113 -83393367 - AluSx SINE Alu 0 318 1 882 270 34 142 chr17 2045113 2045230 -83393250 + MLT1K LTR MaLR 439 567 -21 860 163 36 24 chr17 2045726 2045892 -83392588 - AluJo SINE Alu -22 290 123 2183 78 0 3 chr17 2045950 2046232 -83392248 + AluSx SINE Alu 9 289 -23 2154 103 0 10 chr17 2046241 2046543 -83391937 + AluY SINE Alu 1 299 -12 183 42 0 0 chr17 2046547 2046571 -83391909 + (TTTAA)n Simple_repeat Simple_repeat 1 24 0 1870 161 0 0 chr17 2046654 2046940 -83391540 - AluJb SINE Alu -18 294 9 390 277 28 74 chr17 2047607 2047746 -83390734 + L1ME3 LINE L1 5565 5709 -457 2001 53 0 0 chr17 2047746 2047991 -83390489 - AluY SINE Alu -3 308 64 390 277 28 74 chr17 2047991 2048026 -83390454 + L1ME3 LINE L1 5709 5744 -422 2218 79 21 0 chr17 2048026 2048317 -83390163 + AluSx SINE Alu 1 297 -15 390 277 28 74 chr17 2048317 2048435 -83390045 + L1ME3 LINE L1 5744 5850 -316 1917 122 13 10 chr17 2048464 2048768 -83389712 - AluSx SINE Alu -7 305 1 2500 59 0 0 chr17 2048879 2049186 -83389294 - AluY SINE Alu -4 307 1 2266 105 0 0 chr17 2049234 2049539 -83388941 - AluSg SINE Alu -5 305 1 1651 169 13 26 chr17 2049541 2049854 -83388626 - AluJo SINE Alu -3 309 1 248 217 130 99 chr17 2049925 2050086 -83388394 + L1MC4a LINE L1 5780 5945 -1863 2180 112 7 0 chr17 2050086 2050390 -83388090 + AluSx SINE Alu 1 306 -6 779 125 7 0 chr17 2050465 2050601 -83387879 + (GGGGA)n Simple_repeat Simple_repeat 1 137 0 2308 61 0 10 chr17 2050779 2051096 -83387384 - AluSc SINE Alu 0 309 1 2001 92 0 18 chr17 2051097 2051379 -83387101 - AluSx SINE Alu -14 298 22 541 151 0 0 chr17 2051438 2051524 -83386956 + L1MB1 LINE L1 6082 6167 -1 783 197 0 0 chr17 2051579 2051711 -83386769 + FLAM_C SINE Alu 2 133 0 2262 80 10 3 chr17 2052246 2052545 -83385935 + AluSx SINE Alu 1 301 -11 292 197 68 68 chr17 2052983 2053100 -83385380 + L2 LINE L2 2920 3036 -277 2317 84 7 0 chr17 2053163 2053471 -83385009 - AluSx SINE Alu -2 310 1 1315 78 0 0 chr17 2053837 2054004 -83384476 - AluSx SINE Alu -145 167 1 329 309 81 51 chr17 2054004 2054240 -83384240 + L2 LINE L2 3021 3263 -50 2232 110 0 0 chr17 2054496 2054804 -83383676 - AluSc SINE Alu -1 308 1 2122 95 0 46 chr17 2055235 2055560 -83382920 + AluY SINE Alu 1 310 -1 794 233 23 7 chr17 2055807 2056014 -83382466 - MIR SINE MIR -20 242 34 213 254 14 56 chr17 2056000 2056071 -83382409 + L2 LINE L2 3245 3312 -1 * 1518 173 50 11 chr17 2056301 2056579 -83381901 + AluJo SINE Alu 6 294 -18 2459 69 10 0 chr17 2056762 2057067 -83381413 - AluSp SINE Alu -3 310 3 2218 102 3 0 chr17 2057069 2057364 -83381116 - AluSx SINE Alu -16 296 1 2497 58 7 0 chr17 2057379 2057688 -83380792 - AluY SINE Alu 0 311 1 932 81 35 152 chr17 2058513 2058659 -83379821 - AluSx SINE Alu -128 184 65 1314 25 12 6 chr17 2058659 2058822 -83379658 + L1PA4 LINE L1 5992 6155 0 932 81 35 152 chr17 2058822 2058872 -83379608 - AluSx SINE Alu -247 65 11 237 33 0 0 chr17 2058879 2058909 -83379571 + (A)n Simple_repeat Simple_repeat 1 30 0 1443 181 18 18 chr17 2058909 2059190 -83379290 - AluJo SINE Alu -31 281 1 928 150 33 56 chr17 2059673 2059853 -83378627 + MER3 DNA MER1_type 1 129 -80 1973 133 7 0 chr17 2059856 2060156 -83378324 + AluJb SINE Alu 1 302 -10 410 181 150 16 chr17 2060158 2060285 -83378195 + L1ME4a LINE L1 5975 6118 -3 1663 96 57 57 chr17 2060495 2060796 -83377684 + AluSg SINE Alu 1 301 0 344 305 114 55 chr17 2060821 2060891 -83377589 + L1MC/D LINE L1 5485 5549 -573 2108 93 10 3 chr17 2060891 2061191 -83377289 - AluSq SINE Alu -11 302 1 344 305 114 55 chr17 2061191 2061442 -83377038 + L1MC/D LINE L1 5549 5820 -302 1484 181 60 17 chr17 2061449 2061748 -83376732 + AluJb SINE Alu 1 312 0 2073 97 28 0 chr17 2061764 2062053 -83376427 + AluSx SINE Alu 3 299 -13 942 141 58 0 chr17 2062055 2062211 -83376269 + AluSg/x SINE Alu 140 304 -6 2335 65 0 7 chr17 2062215 2062507 -83375973 + AluY SINE Alu 6 295 -16 771 278 17 30 chr17 2062549 2062783 -83375697 - MIR SINE MIR 0 262 32 2130 71 18 14 chr17 2062902 2063236 -83375244 + AluSx SINE Alu 1 335 0 2230 99 3 0 chr17 2063394 2063698 -83374782 + AluY SINE Alu 1 305 -6 2162 108 3 0 chr17 2063709 2064005 -83374475 + AluSq SINE Alu 1 297 -16 3119 179 17 22 chr17 2064006 2064236 -83374244 + L1MB3 LINE L1 5600 5830 -353 2029 130 0 19 chr17 2064236 2064552 -83373928 + AluSx SINE Alu 1 310 -2 3119 179 17 22 chr17 2064552 2064908 -83373572 + L1MB3 LINE L1 5830 6183 0 2206 71 0 3 chr17 2064914 2065196 -83373284 + AluSx SINE Alu 24 304 -8 2238 82 0 0 chr17 2065748 2066073 -83372407 + AluSx SINE Alu 1 325 0 622 188 100 35 chr17 2066094 2066264 -83372216 - MIR SINE MIR -11 251 71 336 278 45 65 chr17 2066310 2066499 -83371981 + MER5A DNA MER1_type 1 175 -3 439 189 78 0 chr17 2067273 2067363 -83371117 - MIR SINE MIR -138 124 28 593 208 39 101 chr17 2067465 2067537 -83370943 + MER20 DNA MER1_type 1 76 -143 2209 83 16 19 chr17 2067537 2067850 -83370630 - AluSx SINE Alu 0 312 1 593 208 39 101 chr17 2067850 2067984 -83370496 + MER20 DNA MER1_type 76 194 -25 641 203 5 107 chr17 2068099 2068159 -83370321 - MER5B DNA MER1_type -1 177 113 2043 98 0 17 chr17 2068159 2068454 -83370026 + AluSg SINE Alu 5 294 -16 641 203 5 107 chr17 2068454 2068524 -83369956 - MER5B DNA MER1_type -65 113 71 2328 94 0 0 chr17 2068524 2068822 -83369658 - AluSq SINE Alu -15 298 1 641 203 5 107 chr17 2068822 2068887 -83369593 - MER5B DNA MER1_type -107 71 1 1029 96 0 0 chr17 2069515 2069651 -83368829 + AluSq/x SINE Alu 1 136 -176 2268 95 0 3 chr17 2069651 2069956 -83368524 + AluSx SINE Alu 1 304 -8 226 202 30 81 chr17 2070143 2070242 -83368238 + MIR SINE MIR 59 152 -56 453 290 77 80 chr17 2070390 2070701 -83367779 + L3 LINE CR1 1215 1525 -52 2475 72 0 0 chr17 2070701 2071007 -83367473 + AluSg SINE Alu 1 306 -4 1308 56 0 0 chr17 2071007 2071169 -83367311 + L1PA4 LINE L1 5994 6155 0 453 290 77 80 chr17 2071169 2071218 -83367262 + L3 LINE CR1 1523 1575 -2 1196 208 77 19 chr17 2073311 2073623 -83364857 - MER61B LTR ERV1 0 425 1 1091 72 0 0 chr17 2074333 2074472 -83364008 + AluSq/x SINE Alu 1 139 -173 1394 141 133 16 chr17 2074546 2074833 -83363647 + AluSx SINE Alu 1 317 0 2003 104 0 14 chr17 2074833 2075153 -83363327 + AluSx SINE Alu 1 316 0 192 135 0 0 chr17 2075746 2075783 -83362697 + (CA)n Simple_repeat Simple_repeat 2 38 0 2018 106 17 3 chr17 2075857 2075988 -83362492 + AluSx SINE Alu 1 129 -183 198 0 0 0 chr17 2075988 2076010 -83362470 + (TAA)n Simple_repeat Simple_repeat 2 23 0 2018 106 17 3 chr17 2076010 2076170 -83362310 + AluSx SINE Alu 129 296 -16 396 283 53 0 chr17 2076391 2076504 -83361976 - L2 LINE L2 -1 3312 3194 342 196 134 31 chr17 2076593 2076690 -83361790 - MIR3 SINE MIR -7 201 95 506 339 86 5 chr17 2077064 2077250 -83361230 + MIR SINE MIR 47 247 -15 782 254 68 36 chr17 2077499 2077616 -83360864 - L1M4 LINE L1 -1290 4856 4744 1948 142 0 0 chr17 2077616 2077933 -83360547 - AluSx SINE Alu 0 317 1 782 254 68 36 chr17 2077933 2078066 -83360414 - L1M4 LINE L1 -1402 4744 4597 283 260 13 0 chr17 2078156 2078233 -83360247 + MLT1K LTR MaLR 509 586 -2 237 278 0 42 chr17 2078569 2078641 -83359839 - MIR SINE MIR -109 153 85 205 277 15 15 chr17 2078723 2078788 -83359692 + L2 LINE L2 2995 3059 -213 2012 108 28 3 chr17 2078816 2079102 -83359378 - AluSq SINE Alu -20 293 1 423 0 0 0 chr17 2079882 2079929 -83358551 + (CA)n Simple_repeat Simple_repeat 1 47 0 2368 92 0 0 chr17 2080027 2080332 -83358148 - AluSx SINE Alu -7 305 1 2297 107 0 0 chr17 2080377 2080686 -83357794 + AluSc SINE Alu 1 309 0 395 214 0 11 chr17 2081194 2081283 -83357197 - MIR SINE MIR -83 179 92 279 331 24 0 chr17 2081809 2081936 -83356544 + (CACCAT)n Simple_repeat Simple_repeat 2 131 0 328 358 20 35 chr17 2082429 2082630 -83355850 - MIR SINE MIR -54 208 11 223 226 208 28 chr17 2083161 2083267 -83355213 - L2 LINE L2 -10 3262 3138 186 150 0 0 chr17 2084440 2084480 -83354000 + (CA)n Simple_repeat Simple_repeat 1 40 0 213 238 0 0 chr17 2084563 2084643 -83353837 + (CA)n Simple_repeat Simple_repeat 1 80 0 219 318 6 35 chr17 2085592 2085762 -83352718 + (CA)n Simple_repeat Simple_repeat 1 165 0 183 288 51 17 chr17 2086138 2086197 -83352283 + L2 LINE L2 3191 3251 -21 2302 105 0 3 chr17 2086344 2086658 -83351822 + AluSq SINE Alu 1 313 0 355 308 29 34 chr17 2087366 2087410 -83351070 + MLT1K LTR MaLR 378 421 -167 2077 89 38 0 chr17 2087410 2087702 -83350778 - AluSx SINE Alu -9 303 1 355 308 29 34 chr17 2087702 2087865 -83350615 + MLT1K LTR MaLR 421 584 -4 191 365 54 0 chr17 2087937 2088011 -83350469 - L2 LINE L2 -27 3245 3168 2373 83 0 0 chr17 2088067 2088367 -83350113 + AluSq SINE Alu 1 300 -13 366 161 0 0 chr17 2089066 2089128 -83349352 + MIR SINE MIR 85 146 -116 2258 107 3 0 chr17 2089361 2089671 -83348809 + AluSx SINE Alu 1 311 -1 407 276 135 0 chr17 2089808 2089964 -83348516 - MIR SINE MIR -7 255 79 2103 118 0 0 chr17 2090298 2090594 -83347886 - AluSx SINE Alu -13 299 4 181 373 127 0 chr17 2090951 2091069 -83347411 + MIR3 SINE MIR 46 178 -30 2138 97 7 23 chr17 2091101 2091409 -83347071 + AluSx SINE Alu 1 303 -9 1724 117 0 70 chr17 2091709 2092007 -83346473 - AluSx SINE Alu 0 312 36 1804 123 39 7 chr17 2092174 2092458 -83346022 + AluJb SINE Alu 2 294 -18 322 874 0 27 chr17 2092507 2092525 -83345955 + L1MC4a LINE L1 5572 5592 -529 2381 147 112 68 chr17 2092525 2092915 -83345565 + MLT2B1 LTR ERVL 1 372 -148 1927 122 0 45 chr17 2092915 2093227 -83345253 + AluSx SINE Alu 5 302 -10 2381 147 112 68 chr17 2093227 2093269 -83345211 + MLT2B1 LTR ERVL 372 411 -109 195 42 0 0 chr17 2093269 2093293 -83345187 + (CA)n Simple_repeat Simple_repeat 2 25 0 2381 147 112 68 chr17 2093293 2093357 -83345123 + MLT2B1 LTR ERVL 411 520 0 322 874 0 27 chr17 2093357 2093650 -83344830 + L1MC4a LINE L1 5592 5889 -232 2311 94 0 0 chr17 2093654 2093961 -83344519 + AluY SINE Alu 1 307 -4 1585 186 34 3 chr17 2093971 2094266 -83344214 + AluJo SINE Alu 7 310 -2 2116 96 10 7 chr17 2094270 2094572 -83343908 + AluSx SINE Alu 1 303 -9 2118 103 0 28 chr17 2094572 2094893 -83343587 + AluSx SINE Alu 1 312 0 836 218 154 3 chr17 2095201 2095494 -83342986 - L1ME LINE L1 -567 5597 5261 2451 72 0 0 chr17 2095503 2095809 -83342671 - AluY SINE Alu -5 306 1 2317 91 0 0 chr17 2095811 2096109 -83342371 - AluSg SINE Alu -12 298 1 692 167 15 38 chr17 2096109 2096241 -83342239 - AluJo/FLAM SINE Alu -173 129 1 2057 129 0 13 chr17 2096243 2096554 -83341926 - AluJb SINE Alu -5 307 1 990 221 50 31 chr17 2096556 2096714 -83341766 - L1ME LINE L1 -947 5199 5046 2191 102 0 13 chr17 2096714 2097019 -83341461 - AluSc SINE Alu -8 301 1 990 221 50 31 chr17 2097019 2097217 -83341263 - L1ME LINE L1 -1100 5046 4836 754 306 5 0 chr17 2097265 2097461 -83341019 - MER117 DNA MER1_type 0 197 1 351 212 71 62 chr17 2097464 2097577 -83340903 - MIR SINE MIR -135 127 14 232 363 109 16 chr17 2097551 2097744 -83340736 + MIR SINE MIR 32 242 -20 * 2105 81 3 47 chr17 2098212 2098532 -83339948 - AluSq SINE Alu 0 307 1 364 271 102 0 chr17 2098533 2098651 -83339829 + MIR SINE MIR 63 192 -70 1014 238 109 55 chr17 2099408 2099518 -83338962 - LTR56 LTR ERV1 -1 444 341 2186 115 0 3 chr17 2099518 2099823 -83338657 - AluSx SINE Alu -8 304 1 1014 238 109 55 chr17 2099823 2100133 -83338347 - LTR56 LTR ERV1 -104 341 1 269 343 0 19 chr17 2100261 2100366 -83338114 + L2 LINE L2 2304 2406 -908 2225 75 0 0 chr17 2100379 2100693 -83337787 - AluY SINE Alu 0 314 1 2602 142 8 62 chr17 2100703 2101339 -83337141 - MER4B LTR ERV1 0 779 2 2386 75 7 0 chr17 2101340 2101645 -83336835 - AluSp SINE Alu -6 307 1 793 335 23 0 chr17 2101656 2101916 -83336564 + L2 LINE L2 2480 2745 -569 1987 107 0 11 chr17 2101922 2102193 -83336287 + AluSx SINE Alu 1 268 -44 341 371 54 5 chr17 2102236 2102422 -83336058 - L2 LINE L2 -530 2784 2590 186 197 224 0 chr17 2102560 2102636 -83335844 - MER5A DNA MER1_type -93 96 4 307 280 229 0 chr17 2102683 2102840 -83335640 - L2 LINE L2 -896 2418 2226 502 363 14 5 chr17 2103248 2103471 -83335009 + MIR SINE MIR 34 258 -4 2118 123 0 0 chr17 2103570 2103871 -83334609 - AluSq SINE Alu -12 301 1 922 191 7 0 chr17 2103973 2104232 -83334248 + L1MA4 LINE L1 5172 5432 -743 * 1106 171 19 0 chr17 2104225 2104435 -83334045 - L1M4 LINE L1 -493 5691 5478 5152 131 30 15 chr17 2104473 2104952 -83333528 + L1MA4 LINE L1 5430 5928 -372 2240 92 16 3 chr17 2104952 2105258 -83333222 + AluSx SINE Alu 1 310 -2 5152 131 30 15 chr17 2105258 2105626 -83332854 + L1MA4 LINE L1 5928 6289 -11 291 228 22 33 chr17 2105721 2105813 -83332667 - L2 LINE L2 -182 3090 3000 247 308 239 0 chr17 2106529 2106646 -83331834 - MIR3 SINE MIR -22 186 42 1430 174 0 8 chr17 2107165 2107412 -83331068 - AluJb SINE Alu -26 286 42 542 333 4 71 chr17 2107530 2107601 -83330879 + MIR SINE MIR 1 75 -187 2084 86 18 0 chr17 2107601 2107900 -83330580 - AluSg SINE Alu 0 304 1 542 333 4 71 chr17 2107900 2108082 -83330398 + MIR SINE MIR 75 238 -24 348 24 0 0 chr17 2108727 2108768 -83329712 + (CA)n Simple_repeat Simple_repeat 1 41 0 214 214 0 0 chr17 2108920 2108962 -83329518 - MIR SINE MIR -110 152 111 367 252 48 0 chr17 2108972 2109075 -83329405 + MIR SINE MIR 81 188 -74 432 323 117 68 chr17 2109747 2109995 -83328485 + MIR SINE MIR 3 262 0 317 314 191 0 chr17 2110379 2110615 -83327865 + MLT1L LTR MaLR 218 498 -117 2152 101 0 13 chr17 2110849 2111147 -83327333 - AluSg SINE Alu -16 294 1 22 0 0 0 chr17 2111657 2111679 -83326801 + AT_rich Low_complexity Low_complexity 1 22 0 544 167 0 0 chr17 2111679 2111763 -83326717 - FLAM_C SINE Alu -25 118 35 2189 92 7 23 chr17 2111830 2112136 -83326344 + AluSx SINE Alu 1 301 -11 1099 194 45 4 chr17 2112228 2112475 -83326005 + MER7A DNA MER2_type 1 255 -91 321 197 58 88 chr17 2112492 2112629 -83325851 + MER7A DNA MER2_type 214 346 0 303 308 121 11 chr17 2112680 2112862 -83325618 - MIR SINE MIR -29 233 32 246 105 0 0 chr17 2112972 2113010 -83325470 + (A)n Simple_repeat Simple_repeat 1 38 0 210 37 0 0 chr17 2113986 2114013 -83324467 + (T)n Simple_repeat Simple_repeat 1 27 0 1369 105 51 39 chr17 2114160 2114417 -83324063 + AluSq SINE Alu 46 305 -8 2354 79 0 19 chr17 2114799 2115117 -83323363 + AluSx SINE Alu 1 312 0 2424 62 7 0 chr17 2115661 2115967 -83322513 - AluSc SINE Alu -1 308 1 400 331 51 11 chr17 2116741 2116916 -83321564 - MIR SINE MIR 0 262 81 213 380 26 9 chr17 2117029 2117142 -83321338 + MIR SINE MIR 23 137 -71 368 302 0 0 chr17 2117261 2117357 -83321123 - L3 LINE CR1 -78 1499 1404 548 330 90 67 chr17 2118192 2119290 -83319190 + L2 LINE L2 2131 3258 -14 2384 75 0 0 chr17 2119294 2119588 -83318892 + AluY SINE Alu 1 294 -17 2310 93 0 10 chr17 2119597 2119908 -83318572 + AluSx SINE Alu 1 308 -4 226 286 88 23 chr17 2120971 2121131 -83317349 - MIR SINE MIR -70 192 23 213 219 109 78 chr17 2121203 2121267 -83317213 + MER5A DNA MER1_type 59 124 -65 209 311 118 37 chr17 2122841 2123002 -83315478 + MIR SINE MIR 65 238 -24 453 203 142 14 chr17 2123154 2123302 -83315178 - MIR3 SINE MIR -15 193 27 2158 112 13 0 chr17 2123766 2124069 -83314411 + AluSg SINE Alu 1 307 -3 2234 104 0 3 chr17 2125778 2126085 -83312395 + AluSx SINE Alu 1 306 -6 270 95 0 0 chr17 2126202 2126244 -83312236 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 838 127 0 0 chr17 2126244 2126362 -83312118 - FLAM_C SINE Alu -25 118 1 2071 116 30 3 chr17 2128075 2128376 -83310104 - AluSg SINE Alu -1 309 1 509 202 0 0 chr17 2128954 2129048 -83309432 + FRAM SINE Alu 68 161 -15 255 320 0 13 chr17 2129158 2129233 -83309247 - MIR SINE MIR -12 250 177 370 268 183 0 chr17 2130022 2130187 -83308293 - MIR SINE MIR -60 148 6 262 395 0 0 chr17 2130185 2130320 -83308160 + MIR SINE MIR 31 140 -68 * 2202 75 0 4 chr17 2130912 2131191 -83307289 + AluSq SINE Alu 1 278 -35 231 36 0 0 chr17 2131191 2131219 -83307261 + (CAAT)n Simple_repeat Simple_repeat 3 30 0 488 307 84 6 chr17 2131766 2131932 -83306548 + MIR3 SINE MIR 5 183 -25 235 198 88 77 chr17 2131939 2131972 -83306508 + HsTC2 DNA Tc2 1 32 -1866 1692 159 0 36 chr17 2131972 2132274 -83306206 - AluJb SINE Alu -21 291 1 235 198 88 77 chr17 2132274 2132331 -83306149 + HsTC2 DNA Tc2 32 92 -1806 200 59 29 0 chr17 2132419 2132453 -83306027 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2115 96 0 7 chr17 2132455 2132735 -83305745 - AluSc SINE Alu -31 278 1 609 210 11 81 chr17 2132736 2132792 -83305688 - MIR SINE MIR -65 197 139 2041 101 7 42 chr17 2132792 2133098 -83305382 - AluSg SINE Alu -15 295 1 609 210 11 81 chr17 2133098 2133227 -83305253 - MIR SINE MIR -123 139 25 223 279 29 0 chr17 2133236 2133304 -83305176 + GA-rich Low_complexity Low_complexity 5 74 0 232 271 0 0 chr17 2133306 2133354 -83305126 - L2 LINE L2 -15 3257 3210 226 165 0 196 chr17 2133484 2133581 -83304899 - L1M3 LINE L1 -653 5527 5450 2346 89 0 0 chr17 2133586 2133889 -83304591 - AluY SINE Alu -8 303 1 1557 110 0 13 chr17 2133889 2134063 -83304417 - AluSg/x SINE Alu -5 307 135 2056 125 0 3 chr17 2134063 2134359 -83304121 - AluSg SINE Alu -15 295 1 1557 110 0 13 chr17 2134359 2134411 -83304069 - AluSg/x SINE Alu -177 135 84 299 295 19 38 chr17 2134597 2134702 -83303778 + L2 LINE L2 3208 3310 -3 226 286 29 0 chr17 2135293 2135363 -83303117 + CT-rich Low_complexity Low_complexity 1 72 0 306 350 0 8 chr17 2136122 2136139 -83302341 + MIR SINE MIR 22 38 -224 2285 95 0 3 chr17 2136139 2136443 -83302037 - AluSx SINE Alu -9 303 1 306 350 0 8 chr17 2136443 2136542 -83301938 + MIR SINE MIR 38 137 -125 207 273 82 45 chr17 2136657 2136767 -83301713 - L2 LINE L2 -12 3301 3188 2421 65 3 3 chr17 2136791 2137100 -83301380 - AluSg SINE Alu 0 310 2 243 0 0 0 chr17 2137905 2137932 -83300548 + (TG)n Simple_repeat Simple_repeat 2 28 0 2270 103 0 0 chr17 2137941 2138241 -83300239 - AluSx SINE Alu -12 300 1 23 33 0 0 chr17 2138246 2138276 -83300204 + AT_rich Low_complexity Low_complexity 1 30 0 807 222 5 31 chr17 2138621 2138815 -83299665 + MIR SINE MIR 47 235 -27 1830 138 46 0 chr17 2138844 2139127 -83299353 - AluSx SINE Alu -16 296 1 2284 85 3 3 chr17 2139147 2139442 -83299038 - AluSq SINE Alu -16 297 3 2114 126 3 0 chr17 2139442 2139743 -83298737 - AluSx SINE Alu -10 302 1 4337 163 29 12 chr17 2139904 2140411 -83298069 - L1MA5 LINE L1 -4 6296 5770 1989 113 12 41 chr17 2140411 2140731 -83297749 - AluSx SINE Alu -1 311 1 4337 163 29 12 chr17 2140731 2140980 -83297500 - L1MA5 LINE L1 -530 5770 5527 2151 93 0 17 chr17 2141450 2141623 -83296857 - AluSx SINE Alu -10 302 135 249 108 0 0 chr17 2141623 2141660 -83296820 + (TA)n Simple_repeat Simple_repeat 2 38 0 2151 93 0 17 chr17 2141660 2141787 -83296693 - AluSx SINE Alu -177 135 7 468 175 34 73 chr17 2142425 2142450 -83296030 - HAL1 LINE L1 -335 2172 2148 2453 62 0 7 chr17 2142450 2142755 -83295725 - AluY SINE Alu -8 303 1 468 175 34 73 chr17 2142755 2142906 -83295574 - HAL1 LINE L1 -359 2148 2003 1833 174 23 0 chr17 2142906 2143210 -83295270 - AluJo SINE Alu -1 311 1 1132 224 74 55 chr17 2143371 2143580 -83294900 - HAL1 LINE L1 -809 1698 1494 2349 96 0 3 chr17 2143580 2143893 -83294587 - AluSx SINE Alu 0 312 1 1132 224 74 55 chr17 2143893 2144103 -83294377 - HAL1 LINE L1 -1013 1494 1271 681 277 49 71 chr17 2144110 2144618 -83293862 - MLT1G LTR MaLR -51 539 38 263 229 169 0 chr17 2144653 2144771 -83293709 - HAL1 LINE L1 -1254 1253 1116 2266 83 0 40 chr17 2144784 2145110 -83293370 - AluSq SINE Alu 0 313 1 251 253 12 24 chr17 2145110 2145193 -83293287 - HAL1 LINE L1 -2425 82 1 906 101 0 0 chr17 2145777 2145896 -83292584 + AluSq/x SINE Alu 15 133 -180 2069 114 0 26 chr17 2145909 2146215 -83292265 + AluSx SINE Alu 1 298 -14 364 270 9 18 chr17 2146848 2146959 -83291521 + MER113 DNA MER1_type? 84 193 -328 627 288 83 0 chr17 2147105 2147310 -83291170 + MIR SINE MIR 2 223 -39 2239 82 0 3 chr17 2147355 2147647 -83290833 - AluSx SINE Alu -21 291 1 242 322 42 17 chr17 2148184 2148302 -83290178 + MIR SINE MIR 20 140 -68 2197 116 0 3 chr17 2148824 2149135 -83289345 + AluSq SINE Alu 1 310 -3 1534 102 204 8 chr17 2149184 2149429 -83289051 - AluSg1 SINE Alu -16 293 1 1980 130 31 0 chr17 2149689 2149981 -83288499 - AluJb SINE Alu -11 301 1 461 293 140 0 chr17 2150543 2150700 -83287780 - MIR SINE MIR -26 236 58 948 212 9 4 chr17 2150714 2150944 -83287536 - L1MB7 LINE L1 -158 6026 5801 2108 73 3 28 chr17 2150962 2151280 -83287200 - AluY SINE Alu 0 311 1 2074 114 3 3 chr17 2151282 2151572 -83286908 - AluSx SINE Alu -14 298 9 22 35 0 0 chr17 2151581 2151610 -83286870 + AT_rich Low_complexity Low_complexity 1 29 0 547 236 0 0 chr17 2151610 2151737 -83286743 - L1MB7 LINE L1 -355 5829 5703 180 0 0 0 chr17 2152134 2152154 -83286326 + (CAT)n Simple_repeat Simple_repeat 2 21 0 23 0 0 0 chr17 2152196 2152219 -83286261 + AT_rich Low_complexity Low_complexity 1 23 0 2283 76 0 0 chr17 2152221 2152511 -83285969 - AluSq SINE Alu -23 290 1 431 228 60 54 chr17 2152534 2152683 -83285797 - MIR SINE MIR -103 159 10 880 241 55 8 chr17 2153707 2153964 -83284516 - MLT1C LTR MaLR 0 467 199 2156 116 0 7 chr17 2153987 2154288 -83284192 - AluSx SINE Alu -13 299 1 354 45 0 0 chr17 2156300 2156344 -83282136 + (TG)n Simple_repeat Simple_repeat 1 44 0 590 249 133 0 chr17 2156427 2156592 -83281888 - MER5A DNA MER1_type -2 187 1 2222 97 0 3 chr17 2156652 2156952 -83281528 - AluSq SINE Alu -14 299 1 240 86 0 0 chr17 2157853 2157888 -83280592 + (TCCC)n Simple_repeat Simple_repeat 3 37 0 1375 254 178 6 chr17 2158619 2159120 -83279360 - MLT1K LTR MaLR 0 588 2 431 263 9 171 chr17 2159124 2159470 -83279010 - L2 LINE L2 -25 3247 2958 519 301 75 0 chr17 2159475 2159582 -83278898 + MER5A DNA MER1_type 4 130 -59 2278 75 3 0 chr17 2159582 2159875 -83278605 - AluSg SINE Alu -16 294 1 519 301 75 0 chr17 2159875 2159940 -83278540 + MER5A DNA MER1_type 130 189 0 754 311 179 19 chr17 2159994 2160498 -83277982 - L2 LINE L2 -410 2904 2482 1507 187 33 0 chr17 2160498 2160771 -83277709 - AluJo SINE Alu -25 287 6 754 311 179 19 chr17 2160771 2161005 -83277475 - L2 LINE L2 -832 2482 2048 489 293 138 0 chr17 2261278 2261459 -83177021 + MIR SINE MIR 50 255 -7 230 229 114 14 chr17 2261450 2261520 -83176960 - MIR SINE MIR -95 113 37 * 268 303 55 9 chr17 2261900 2262009 -83176471 - L2 LINE L2 -25 3247 3134 23 0 0 0 chr17 2262554 2262577 -83175903 + AT_rich Low_complexity Low_complexity 1 23 0 1091 200 30 34 chr17 2262632 2262703 -83175777 - L1MB7 LINE L1 -1 6183 6113 2396 87 3 3 chr17 2262703 2263015 -83175465 - AluSq SINE Alu -1 312 1 1091 200 30 34 chr17 2263015 2263208 -83175272 - L1MB7 LINE L1 -71 6113 5920 262 114 0 0 chr17 2264311 2264346 -83174134 + U2 snRNA snRNA 1 35 -153 4224 99 11 0 chr17 2264391 2264945 -83173535 - L1PA11 LINE L1 0 6174 5615 441 127 0 0 chr17 2264947 2265018 -83173462 + L1P LINE L1 5017 5087 -1059 1198 28 0 14 chr17 2265019 2265161 -83173319 + MER11A LTR ERVK 1 140 -1126 9443 23 0 0 chr17 2265169 2266976 -83171504 - L1PA2 LINE L1 -2 6153 4346 8406 31 0 0 chr17 2266976 2267950 -83170530 + L1PA2 LINE L1 3387 4360 -1786 316 329 40 72 chr17 2268001 2268223 -83170257 - L1MB7 LINE L1 -2161 5647 5433 1544 180 34 3 chr17 2268228 2268523 -83169957 - L1MA9 LINE L1 0 6312 6009 1593 179 42 72 chr17 2268530 2268988 -83169492 - L1MCa LINE L1 -4896 1530 1087 1974 175 29 14 chr17 2268988 2269336 -83169144 - MLT1A1 LTR MaLR 0 365 13 3199 197 42 66 chr17 2269337 2270137 -83168343 - L1MCa LINE L1 -4849 1058 577 2104 132 0 3 chr17 2270137 2270433 -83168047 + AluSq SINE Alu 1 295 -18 3199 197 42 66 chr17 2270433 2270996 -83167484 - L1MCa LINE L1 -5330 577 2 248 171 0 0 chr17 2271211 2271252 -83167228 + MER105 DNA DNA 2 42 -162 * 556 248 74 0 chr17 2271251 2271400 -83167080 - MER105 DNA DNA -42 162 3 756 155 65 6 chr17 2271911 2272079 -83166401 - Charlie5 DNA MER1_type -27 2585 2408 491 135 34 149 chr17 2272117 2272192 -83166288 - Charlie5 DNA MER1_type -160 2464 2413 2230 114 3 0 chr17 2272192 2272498 -83165982 - AluSc SINE Alu -2 307 1 491 135 34 149 chr17 2272498 2272570 -83165910 - Charlie5 DNA MER1_type -211 2413 2334 * 1225 262 111 25 chr17 2272561 2273004 -83165476 - MLT1E LTR MaLR -112 481 1 397 121 0 15 chr17 2273038 2273104 -83165376 + MSTA LTR MaLR 1 65 -363 1180 134 153 203 chr17 2273500 2274008 -83164472 - LTR12 LTR ERV1 -231 483 1 897 59 0 0 chr17 2274011 2274113 -83164367 + AluSq/x SINE Alu 35 136 -177 2156 102 3 7 chr17 2274114 2274417 -83164063 + AluY SINE Alu 1 302 -9 857 164 53 0 chr17 2274418 2274570 -83163910 - LTR45B LTR ERV1 -327 162 3 272 290 0 81 chr17 2276218 2276342 -83162138 + MIR SINE MIR 34 147 -115 1798 89 20 16 chr17 2276823 2277143 -83161337 - AluSq SINE Alu 0 359 39 1072 251 39 7 chr17 2277205 2277669 -83160811 + LTR33 LTR ERVL 1 518 -3 1027 221 40 0 chr17 2277829 2278055 -83160425 + MLT1A1 LTR MaLR 130 364 -1 180 395 18 30 chr17 2278056 2278223 -83160257 + L2 LINE L2 2475 2639 -675 796 202 40 0 chr17 2278283 2278456 -83160024 - L1MA4 LINE L1 -4 6296 6117 704 325 41 14 chr17 2278511 2278856 -83159624 + L2 LINE L2 2077 2430 -884 856 231 78 0 chr17 2278877 2279133 -83159347 + MLT1A1 LTR MaLR 2 277 -88 1984 114 7 37 chr17 2280733 2281031 -83157449 - AluSq SINE Alu -24 289 1 2275 169 19 2 chr17 2281031 2281450 -83157030 - L1MA5 LINE L1 -258 6042 5617 348 273 69 18 chr17 2281459 2281792 -83156688 - L1 LINE L1 -1593 4553 4204 201 143 0 0 chr17 2282435 2282470 -83156010 + (GGGAGA)n Simple_repeat Simple_repeat 4 38 0 189 74 0 0 chr17 2282542 2282569 -83155911 + (AATAG)n Simple_repeat Simple_repeat 4 30 0 3327 152 34 7 chr17 2282573 2283159 -83155321 + MER7C DNA MER2_type 1 602 0 217 316 0 13 chr17 2283913 2283989 -83154491 + CT-rich Low_complexity Low_complexity 2 76 0 301 256 44 0 chr17 2284574 2284664 -83153816 - MIR SINE MIR -37 225 132 22 88 0 0 chr17 2284706 2284763 -83153717 + AT_rich Low_complexity Low_complexity 1 57 0 848 121 86 17 chr17 2285119 2285293 -83153187 + MER53 DNA DNA 3 188 -1 1980 162 0 19 chr17 2285556 2285871 -83152609 - AluJo SINE Alu -1 311 3 300 291 38 13 chr17 2286093 2286172 -83152308 + MIR3 SINE MIR 98 178 -30 22 56 0 0 chr17 2286402 2286438 -83152042 + AT_rich Low_complexity Low_complexity 1 36 0 2154 113 0 7 chr17 2286672 2286963 -83151517 + AluSx SINE Alu 1 289 -23 11481 133 91 5 chr17 2286975 2287499 -83150981 - L1MA9 LINE L1 -34 6278 5800 2065 100 16 53 chr17 2287499 2287819 -83150661 - AluSq SINE Alu -5 308 1 11481 133 91 5 chr17 2287819 2290256 -83148224 - L1MA9 LINE L1 -512 5800 3065 8994 20 7 0 chr17 2290256 2292080 -83146400 + L1PA3 LINE L1 4325 6155 0 5420 219 51 73 chr17 2292103 2292524 -83145956 - L1M4 LINE L1 -1598 4784 4355 1215 190 31 0 chr17 2292524 2292750 -83145730 - MER46A DNA MER2_type -3 233 1 5420 219 51 73 chr17 2292750 2293769 -83144711 - L1M4 LINE L1 -2027 4355 3314 2382 80 3 0 chr17 2293769 2294068 -83144412 - AluSc SINE Alu -9 300 1 5420 219 51 73 chr17 2294068 2294402 -83144078 - L1M4 LINE L1 -3068 3314 2974 2374 97 0 10 chr17 2294402 2294712 -83143768 - AluSc SINE Alu -1 308 2 5420 219 51 73 chr17 2294712 2295363 -83143117 - L1M4 LINE L1 -3408 2974 2420 1524 134 4 0 chr17 2295370 2295609 -83142871 + Tigger1 DNA MER2_type 2 241 -2177 433 162 27 18 chr17 2295626 2295737 -83142743 + MER69 DNA AcHobo 2101 2212 -314 518 200 20 0 chr17 2295737 2295837 -83142643 + AluJo SINE Alu 121 222 -90 695 187 251 12 chr17 2295853 2296104 -83142376 + MER69 DNA AcHobo 2216 2526 0 1958 157 3 3 chr17 2296227 2296527 -83141953 + AluJb SINE Alu 1 300 -12 350 262 108 8 chr17 2296937 2297089 -83141391 + MIR SINE MIR 25 180 -58 901 188 41 64 chr17 2297907 2298125 -83140355 - MER58A DNA MER1_type 0 224 12 188 384 89 7 chr17 2298154 2298300 -83140180 + L2 LINE L2 2804 2961 -352 314 289 136 34 chr17 2298402 2298740 -83139740 + LTR33 LTR ERVL 22 393 -130 483 303 102 39 chr17 2299154 2299408 -83139072 + L2 LINE L2 3044 3313 0 186 43 0 0 chr17 2299524 2299547 -83138933 + (TGAA)n Simple_repeat Simple_repeat 3 25 0 268 226 19 0 chr17 2300056 2300109 -83138371 + MLT1D LTR MaLR 1 54 -451 * 1163 154 72 16 chr17 2300104 2300532 -83137948 + MLT1D LTR MaLR 10 505 0 192 158 0 0 chr17 2300558 2300596 -83137884 + (TA)n Simple_repeat Simple_repeat 1 38 0 809 200 12 0 chr17 2300747 2300912 -83137568 - MLT1E2 LTR MaLR 0 626 460 337 215 126 22 chr17 2301682 2301817 -83136663 - MLT1K LTR MaLR -66 522 374 193 391 11 11 chr17 2302249 2302341 -83136139 - MIR SINE MIR -80 182 91 974 182 34 62 chr17 2302341 2302632 -83135848 + L1MA9 LINE L1 5992 6274 -38 262 284 11 34 chr17 2302654 2302742 -83135738 - MIR3 SINE MIR -109 99 14 181 206 0 0 chr17 2303356 2303390 -83135090 - MIR SINE MIR -16 246 213 * 471 351 40 68 chr17 2303360 2303787 -83134693 - L2 LINE L2 -26 3246 2832 465 322 83 10 chr17 2303952 2304157 -83134323 + MIR SINE MIR 30 249 -13 198 200 0 0 chr17 2304123 2304163 -83134317 + L2 LINE L2 3261 3300 -13 * 2661 241 68 22 chr17 2304222 2305265 -83133215 - L1ME3A LINE L1 -5 6165 5088 383 321 18 14 chr17 2306412 2306633 -83131847 + L1M4 LINE L1 3921 4142 -2004 327 280 11 21 chr17 2306635 2306728 -83131752 - L2 LINE L2 -1 3312 3221 585 305 10 5 chr17 2306739 2306936 -83131544 + ERVL LTR ERVL 4709 4906 -858 627 301 10 5 chr17 2307479 2307685 -83130795 + ERVL LTR ERVL 4941 5147 -617 211 365 22 62 chr17 2308176 2308450 -83130030 + L2 LINE L2 2694 2956 -358 310 263 153 25 chr17 2309030 2309148 -83129332 - MER5B DNA MER1_type 0 178 46 507 212 131 77 chr17 2309171 2309368 -83129112 + MER5A DNA MER1_type 14 189 0 2304 103 0 0 chr17 2310112 2310414 -83128066 + AluSp SINE Alu 1 302 -11 1214 331 97 50 chr17 2310449 2310734 -83127746 - L2 LINE L2 -11 3261 2991 2474 74 7 3 chr17 2310734 2311044 -83127436 + AluY SINE Alu 1 311 0 1214 331 97 50 chr17 2311044 2311336 -83127144 - L2 LINE L2 -281 2991 2714 2576 58 0 0 chr17 2311336 2311645 -83126835 + AluY SINE Alu 1 309 -2 1214 331 97 50 chr17 2311645 2312358 -83126122 - L2 LINE L2 -558 2714 1907 30 27 0 0 chr17 2313744 2313781 -83124699 + AT_rich Low_complexity Low_complexity 1 37 0 4552 35 2 0 chr17 2314008 2314547 -83123933 - L1PA3 LINE L1 -3 6152 5613 244 114 0 0 chr17 2314846 2314881 -83123599 + U2 snRNA snRNA 1 35 -153 3934 99 11 0 chr17 2314926 2315480 -83123000 - L1PA11 LINE L1 0 6174 5615 410 127 0 0 chr17 2315482 2315553 -83122927 + L1P LINE L1 5017 5087 -1059 1118 28 0 14 chr17 2315554 2315696 -83122784 + MER11A LTR ERVK 1 140 -1126 13178 24 0 0 chr17 2315704 2318022 -83120458 - L1PA2 LINE L1 -2 6153 3838 29048 43 38 3 chr17 2318023 2321875 -83116605 - L1P LINE L1 -2157 3989 2 3944 130 29 33 chr17 2321875 2322844 -83115636 + MER11A LTR ERVK 119 1266 0 2596 82 3 2 chr17 2322844 2323379 -83115101 + L1P4 LINE L1 5083 5617 -551 242 161 107 0 chr17 2323373 2323429 -83115051 - L1MB4 LINE L1 -36 6144 6083 * 1277 141 20 20 chr17 2323432 2323681 -83114799 - L1MA4 LINE L1 -280 6020 5772 355 305 0 8 chr17 2323800 2323928 -83114552 - L1M4 LINE L1 -1533 4613 4487 337 345 98 0 chr17 2324169 2324363 -83114117 - L1MB4 LINE L1 -2341 5467 5255 22 35 0 0 chr17 2324659 2324688 -83113792 + AT_rich Low_complexity Low_complexity 1 29 0 327 254 88 44 chr17 2324801 2324915 -83113565 - MIR SINE MIR -35 227 109 690 129 23 0 chr17 2326284 2326416 -83112064 - L1MB3 LINE L1 -2 6181 6047 24574 77 10 5 chr17 2326431 2332539 -83105941 - L1PA5 LINE L1 -8 6146 12 334 235 81 78 chr17 2333276 2333302 -83105178 + MLT1K LTR MaLR 32 56 -532 2083 196 112 39 chr17 2333302 2333813 -83104667 + LTR55 LTR ERV 1 548 0 334 235 81 78 chr17 2333813 2334022 -83104458 + MLT1K LTR MaLR 56 298 -290 370 244 0 0 chr17 2334081 2334163 -83104317 - MLT1K LTR MaLR -138 450 369 955 261 127 54 chr17 2334332 2335094 -83103386 + HAL1 LINE L1 637 1454 -1053 243 284 26 32 chr17 2335149 2335272 -83103208 + L1ME LINE L1 3 126 -5944 714 99 18 9 chr17 2335291 2335402 -83103078 - L1MA7 LINE L1 -409 5882 5771 642 137 10 0 chr17 2335402 2335504 -83102976 - L1MA2 LINE L1 0 6304 6202 230 265 0 44 chr17 2335506 2335574 -83102906 + MLT1K LTR MaLR 217 281 -307 4334 116 22 22 chr17 2335651 2336340 -83102140 - L1MA2 LINE L1 -107 6197 5509 434 37 0 0 chr17 2336342 2336396 -83102084 - L1MA2 LINE L1 -895 5407 5354 8101 32 0 0 chr17 2336396 2337539 -83100941 - L1PA3 LINE L1 0 6155 5013 30731 35 1 0 chr17 2337539 2341196 -83097284 + L1PA3 LINE L1 1344 5001 -1145 8039 195 31 83 chr17 2341198 2342826 -83095654 - L1 LINE L1 -783 6782 5072 1843 106 44 7 chr17 2342826 2343099 -83095381 - L1MA1 LINE L1 0 6302 6020 8039 195 31 83 chr17 2343099 2343463 -83095017 - L1 LINE L1 -2493 5072 4691 489 211 11 0 chr17 2343463 2343553 -83094927 - AluJb SINE Alu -11 301 211 8039 195 31 83 chr17 2343553 2344580 -83093900 - L1 LINE L1 -2874 4691 3970 261 0 0 0 chr17 2344580 2344609 -83093871 + (TC)n Simple_repeat Simple_repeat 2 30 0 8039 195 31 83 chr17 2344609 2345639 -83092841 - L1 LINE L1 -3595 3970 2889 316 167 11 67 chr17 2345654 2345744 -83092736 + L1M4 LINE L1 3398 3482 -2664 258 274 49 55 chr17 2346548 2346712 -83091768 + L1MC1 LINE L1 5837 5999 -334 * 1495 149 15 8 chr17 2346594 2346856 -83091624 + L1MB3 LINE L1 5881 6144 -39 811 152 0 30 chr17 2346861 2346993 -83091487 - AluJo SINE Alu -176 136 9 322 302 0 0 chr17 2347286 2347392 -83091088 + L1M4 LINE L1 3465 3570 -2576 6734 206 9 7 chr17 2347397 2348841 -83089639 - L1P LINE L1 -2972 3174 1728 * 20845 40 1 1 chr17 2348836 2351848 -83086632 - L1PA5 LINE L1 -271 5883 2870 6280 142 21 16 chr17 2351824 2352831 -83085649 - MSTA-int LTR MaLR -566 1014 3 * 1961 143 178 22 chr17 2352833 2353203 -83085277 - MSTA LTR MaLR 0 428 1 1813 153 54 15 chr17 2353365 2353699 -83084781 - L1MA7 LINE L1 0 6291 5945 1950 134 62 3 chr17 2353699 2354006 -83084474 + L1M2 LINE L1 5434 5758 -533 429 287 71 71 chr17 2354617 2354899 -83083581 - MLT1I LTR MaLR 0 409 128 254 216 67 97 chr17 2354957 2355091 -83083389 - LTR67 LTR ERVL -17 540 411 312 333 8 17 chr17 2356027 2356147 -83082333 - MLT1L LTR MaLR -355 260 142 192 233 0 0 chr17 2356304 2356347 -83082133 + MIR SINE MIR 61 103 -159 10899 198 44 79 chr17 2356363 2356736 -83081744 - L1PB2 LINE L1 -2 6865 6481 225 232 0 0 chr17 2356736 2356792 -83081688 + LTR66 LTR ERVL 398 453 -157 10899 198 44 79 chr17 2356792 2358959 -83079521 - L1PB2 LINE L1 -386 6481 4241 1981 141 7 3 chr17 2358959 2359258 -83079222 - AluJb SINE Alu -12 300 1 10899 198 44 79 chr17 2359258 2359790 -83078690 - L1PB2 LINE L1 -2626 4241 3692 6207 60 21 57 chr17 2359790 2361974 -83076506 - SVA Other Other -518 1379 54 875 34 26 0 chr17 2361974 2362091 -83076389 + (GGGAGA)n Simple_repeat Simple_repeat 4 123 0 10899 198 44 79 chr17 2362091 2363895 -83074585 - L1PB2 LINE L1 -3174 3693 1828 2268 96 0 0 chr17 2363895 2364188 -83074292 - L1PB1 LINE L1 -1 6150 5858 10899 198 44 79 chr17 2364188 2364342 -83074138 - L1PB2 LINE L1 -5039 1828 1670 320 77 39 0 chr17 2364342 2364394 -83074086 - Alu SINE Alu 0 302 249 10899 198 44 79 chr17 2364394 2364486 -83073994 - L1PB2 LINE L1 -5197 1670 1576 2070 139 10 0 chr17 2364486 2364789 -83073691 - AluSx SINE Alu -6 306 1 10899 198 44 79 chr17 2364789 2366445 -83072035 - L1PB2 LINE L1 -5291 1576 1 409 275 107 0 chr17 2366457 2366588 -83071892 + MIR SINE MIR 117 261 -1 980 244 14 3 chr17 2366902 2367155 -83071325 + L1ME LINE L1 5419 5669 -493 2410 187 120 21 chr17 2367224 2367877 -83070603 - MER52A LTR ERV1 -955 800 4 313 294 24 0 chr17 2368124 2368209 -83070271 - MIR3 SINE MIR -45 163 77 21 0 0 0 chr17 2370502 2370523 -83067957 + AT_rich Low_complexity Low_complexity 1 21 0 200 261 58 0 chr17 2370803 2370872 -83067608 - MIR SINE MIR -93 169 97 297 303 42 34 chr17 2370914 2371033 -83067447 + L2 LINE L2 2953 3072 -200 246 312 21 64 chr17 2371866 2372007 -83066473 + L2 LINE L2 2933 3067 -205 656 292 88 22 chr17 2372224 2372498 -83065982 + L3 LINE CR1 1137 1428 -149 414 258 207 23 chr17 2372542 2372760 -83065720 - MIR SINE MIR -6 256 3 34 84 0 0 chr17 2373094 2373177 -83065303 + AT_rich Low_complexity Low_complexity 1 83 0 967 193 63 19 chr17 2373830 2374037 -83064443 + MER58A DNA MER1_type 1 216 -8 2359 59 3 11 chr17 2374038 2374348 -83064132 + AluSp SINE Alu 1 308 0 244 118 55 47 chr17 2374498 2374625 -83063855 + (TAGA)n Simple_repeat Simple_repeat 1 128 0 606 206 168 29 chr17 2374631 2374840 -83063640 - MIR SINE MIR -18 244 7 21 0 0 0 chr17 2375747 2375768 -83062712 + GC_rich Low_complexity Low_complexity 1 21 0 1992 118 3 20 chr17 2376362 2376667 -83061813 - AluSx SINE Alu -12 300 1 2253 106 0 10 chr17 2377243 2377546 -83060934 + AluSx SINE Alu 1 300 -12 2594 241 92 13 chr17 2377758 2378549 -83059931 + L1ME2 LINE L1 5311 6164 0 263 212 42 76 chr17 2379237 2379355 -83059125 + L1MC4 LINE L1 7791 7904 -138 29 70 0 0 chr17 2379610 2379667 -83058813 + AT_rich Low_complexity Low_complexity 1 57 0 373 267 81 59 chr17 2380017 2380253 -83058227 + HAL1b LINE L1 476 716 -632 288 169 113 0 chr17 2380503 2380574 -83057906 + L1ME2 LINE L1 4783 4861 -1285 * 3658 164 19 15 chr17 2380554 2381226 -83057254 - L1P LINE L1 -1148 4998 4324 587 96 28 4 chr17 2381215 2381346 -83057134 + L1PA13 LINE L1 5943 6072 -93 * 435 225 78 35 chr17 2381353 2381495 -83056985 + L1ME2 LINE L1 5701 5848 -316 980 42 42 0 chr17 2381495 2381614 -83056866 + L1PA13 LINE L1 6037 6160 -3 1128 227 50 35 chr17 2381614 2382051 -83056429 + L1ME2 LINE L1 4829 6076 -88 2022 145 0 0 chr17 2382163 2382499 -83055981 - AluSx SINE Alu 0 336 1 342 273 53 17 chr17 2382549 2382717 -83055763 - L1M4 LINE L1 -779 5367 5197 27 0 0 0 chr17 2382787 2382814 -83055666 + AT_rich Low_complexity Low_complexity 1 27 0 26 0 0 0 chr17 2382982 2383008 -83055472 + AT_rich Low_complexity Low_complexity 1 26 0 282 274 88 49 chr17 2383127 2383433 -83055047 - L1M4 LINE L1 -1252 4894 4577 378 346 34 19 chr17 2383889 2384158 -83054322 - L2 LINE L2 -868 2446 2174 1811 99 3 127 chr17 2384183 2384546 -83053934 + AluSx SINE Alu 5 326 0 1100 70 7 0 chr17 2384601 2384755 -83053725 - L1P4 LINE L1 -489 5672 5512 2430 81 3 0 chr17 2384995 2385303 -83053177 - AluY SINE Alu -2 309 1 1887 112 12 0 chr17 2385651 2385929 -83052551 + AluSg SINE Alu 28 310 0 1918 168 0 3 chr17 2385939 2386249 -83052231 + AluJo SINE Alu 1 309 -3 22 0 0 0 chr17 2386249 2386271 -83052209 + AT_rich Low_complexity Low_complexity 1 22 0 736 339 85 60 chr17 2387758 2388019 -83050461 + L2 LINE L2 1950 2203 -1069 2122 136 10 7 chr17 2388019 2388511 -83049969 + AluSx SINE Alu 1 312 0 736 339 85 60 chr17 2388511 2389535 -83048945 + L2 LINE L2 2203 3261 -11 3574 55 23 5 chr17 2389943 2390383 -83048097 - L1PA8 LINE L1 0 6172 5725 1705 172 23 10 chr17 2390383 2390691 -83047789 + MLT2D LTR ERVL 55 366 -48 951 60 51 31 chr17 2390709 2391031 -83047449 + (TAGA)n Simple_repeat Simple_repeat 1 328 0 1894 242 53 84 chr17 2392953 2393108 -83045372 - L1M4 LINE L1 -1131 5015 4857 728 53 21 21 chr17 2393108 2393242 -83045238 + L1PA2 LINE L1 6050 6183 0 1894 242 53 84 chr17 2393242 2393604 -83044876 - L1M4 LINE L1 -1289 4857 4485 6859 73 63 0 chr17 2393604 2395015 -83043465 - L1PA10 LINE L1 0 6168 4724 1894 242 53 84 chr17 2395015 2395443 -83043037 - L1M4 LINE L1 -1661 4485 4098 * 11904 172 7 18 chr17 2395439 2397498 -83040982 - L1P LINE L1 -1154 4992 2957 2046 115 11 3 chr17 2397498 2397784 -83040696 - AluSx SINE Alu -22 290 3 11904 172 7 18 chr17 2397784 2397942 -83040538 - L1P LINE L1 -3189 2957 2799 969 134 15 0 chr17 2398439 2398573 -83039907 + AluJo SINE Alu 1 136 -176 300 179 0 0 chr17 2398577 2398633 -83039847 - L1P LINE L1 -2085 4061 4006 778 156 170 7 chr17 2398652 2398787 -83039693 + AluJo SINE Alu 134 290 -22 246 62 0 0 chr17 2399042 2399074 -83039406 + (TG)n Simple_repeat Simple_repeat 1 32 0 2303 86 3 0 chr17 2399298 2399589 -83038891 - AluSp SINE Alu -21 292 1 349 270 79 53 chr17 2399977 2400129 -83038351 - MIR SINE MIR -43 219 64 1957 83 0 30 chr17 2400617 2400883 -83037597 + AluY SINE Alu 49 306 -5 251 273 13 0 chr17 2402371 2402448 -83036032 + GA-rich Low_complexity Low_complexity 1 78 0 2322 86 3 29 chr17 2402718 2403032 -83035448 + AluSg SINE Alu 5 310 0 191 269 30 30 chr17 2403043 2403110 -83035370 - L3 LINE CR1 -28 1549 1483 2249 82 0 7 chr17 2403261 2403552 -83034928 - AluY SINE Alu -22 289 1 260 192 39 0 chr17 2403557 2403609 -83034871 + MER5B DNA MER1_type 125 178 0 24 53 0 0 chr17 2404064 2404102 -83034378 + AT_rich Low_complexity Low_complexity 1 38 0 2452 88 0 0 chr17 2404460 2404768 -83033712 + AluSq SINE Alu 1 308 -5 546 253 67 108 chr17 2404774 2404980 -83033500 - L1M4 LINE L1 -1945 4201 3988 378 0 0 0 chr17 2404980 2405022 -83033458 + (TTA)n Simple_repeat Simple_repeat 2 43 0 1775 144 0 11 chr17 2405027 2405290 -83033190 - AluSx SINE Alu -52 260 1 546 253 67 108 chr17 2405290 2405568 -83032912 - L1M4 LINE L1 -2162 3984 3731 2033 119 43 12 chr17 2405874 2406202 -83032278 - L1MA4 LINE L1 -6 6294 5957 797 318 41 11 chr17 2406699 2407139 -83031341 - HAL1b LINE L1 -689 659 207 634 147 9 0 chr17 2408571 2408680 -83029800 - L1MA9 LINE L1 -349 5963 5854 764 145 69 19 chr17 2408683 2408842 -83029638 + L1MA7 LINE L1 6124 6290 -1 2138 63 21 102 chr17 2408908 2409243 -83029237 - AluYb8 SINE Alu -8 310 3 772 223 36 72 chr17 2409293 2409544 -83028936 - L1MA9 LINE L1 -5 6286 6045 568 250 96 14 chr17 2410868 2411076 -83027404 - L2 LINE L2 0 3313 3089 269 297 48 41 chr17 2412241 2412386 -83026094 + MIR3 SINE MIR 31 176 -32 2318 93 0 37 chr17 2412829 2413152 -83025328 + AluSq SINE Alu 1 311 -2 369 301 41 67 chr17 2413307 2413652 -83024828 - L1ME LINE L1 -303 5818 5483 33 66 0 0 chr17 2413702 2413763 -83024717 + AT_rich Low_complexity Low_complexity 1 61 0 320 304 112 0 chr17 2413771 2413896 -83024584 - MIR SINE MIR -12 250 112 362 52 86 35 chr17 2413998 2414056 -83024424 - L1PA15 LINE L1 -3 6162 6102 4979 100 4 1 chr17 2414099 2414778 -83023702 - L1PA13 LINE L1 -49 6114 5434 12220 90 9 0 chr17 2414781 2416353 -83022127 - HERVL LTR ERVL -3328 2326 740 5767 87 10 33 chr17 2416358 2416843 -83021637 + L1PA10 LINE L1 5361 5821 -347 2086 101 11 0 chr17 2416843 2417121 -83021359 - AluSx SINE Alu -22 290 10 5767 87 10 33 chr17 2417121 2417459 -83021021 + L1PA10 LINE L1 5821 6165 -3 * 11353 163 41 18 chr17 2417441 2420727 -83017753 + L1MA5 LINE L1 2929 6290 -10 5477 30 0 0 chr17 2420954 2421551 -83016929 + L1PA3 LINE L1 5556 6152 -3 30 27 0 0 chr17 2421778 2421815 -83016665 + AT_rich Low_complexity Low_complexity 1 37 0 1148 330 96 53 chr17 2423202 2423915 -83014565 + L2 LINE L2 1907 2587 -685 2594 58 0 0 chr17 2423915 2424224 -83014256 - AluY SINE Alu -2 309 1 1148 330 96 53 chr17 2424224 2424520 -83013960 + L2 LINE L2 2587 2869 -403 2480 74 7 3 chr17 2424520 2424830 -83013650 - AluY SINE Alu 0 311 1 1148 330 96 53 chr17 2424830 2425115 -83013365 + L2 LINE L2 2869 3261 -11 2288 99 0 3 chr17 2425150 2425453 -83013027 - AluSp SINE Alu -11 302 1 506 200 156 56 chr17 2426234 2426394 -83012086 - MER5A DNA MER1_type 0 189 14 301 263 153 25 chr17 2426417 2426535 -83011945 + MER5B DNA MER1_type 46 178 0 240 364 27 53 chr17 2427164 2427389 -83011091 - L2 LINE L2 -402 2912 2694 699 301 10 5 chr17 2427880 2428086 -83010394 - ERVL LTR ERVL -617 5147 4941 227 390 70 0 chr17 2429113 2429213 -83009267 + L2 LINE L2 3141 3247 -25 23 68 0 0 chr17 2429715 2429759 -83008721 + AT_rich Low_complexity Low_complexity 1 44 0 5927 139 30 0 chr17 2430038 2431051 -83007429 - L1PA16 LINE L1 -3 6163 5131 192 226 274 0 chr17 2432002 2432064 -83006416 - MIR SINE MIR -107 155 77 511 262 16 40 chr17 2432826 2433024 -83005456 + MIR SINE MIR 10 200 -54 318 258 262 40 chr17 2434022 2434297 -83004183 - L1MC/D LINE L1 -496 5625 5408 369 221 26 0 chr17 2434586 2434663 -83003817 - MER58 DNA MER1_type -1 2419 2341 33 0 0 0 chr17 2434672 2434705 -83003775 + AT_rich Low_complexity Low_complexity 1 33 0 39276 38 5 1 chr17 2434708 2440188 -82998292 - L1PA4 LINE L1 0 6155 656 373 286 117 35 chr17 2440223 2440506 -82997974 - L1MC/D LINE L1 -896 5250 4945 2338 102 0 3 chr17 2440539 2440842 -82997638 - AluSx SINE Alu -10 302 1 262 114 0 0 chr17 2441029 2441064 -82997416 + U2 snRNA snRNA 1 35 -153 4224 99 11 0 chr17 2441109 2441663 -82996817 - L1PA11 LINE L1 0 6174 5615 441 127 0 0 chr17 2441665 2441736 -82996744 + L1P4 LINE L1 5017 5087 -1059 1198 28 0 14 chr17 2441737 2441879 -82996601 + MER11A LTR ERVK 1 140 -1126 13748 31 1 0 chr17 2441887 2444201 -82994279 - L1PA2 LINE L1 -2 6153 3838 31112 43 38 3 chr17 2444202 2448055 -82990425 - L1P LINE L1 -2157 3989 2 4256 127 30 33 chr17 2448055 2449024 -82989456 + MER11A LTR ERVK 119 1266 0 2796 85 3 2 chr17 2449024 2449561 -82988919 + L1P4 LINE L1 5083 5619 -549 266 161 107 0 chr17 2449553 2449609 -82988871 - L1MB4 LINE L1 -36 6144 6083 * 1393 144 21 20 chr17 2449581 2449861 -82988619 - L1MA4 LINE L1 -243 6054 5772 409 290 38 8 chr17 2449980 2450111 -82988369 - L1M4 LINE L1 -1533 4613 4479 331 345 98 0 chr17 2450349 2450543 -82987937 - L1MB4 LINE L1 -2341 5467 5255 22 35 0 0 chr17 2450839 2450868 -82987612 + AT_rich Low_complexity Low_complexity 1 29 0 312 244 35 35 chr17 2450992 2451078 -82987402 - MIR SINE MIR -53 209 124 192 226 274 0 chr17 2452821 2452883 -82985597 + MIR SINE MIR 77 155 -107 5927 139 17 3 chr17 2453833 2454846 -82983634 + L1PA16 LINE L1 5131 6163 -3 23 68 0 0 chr17 2455125 2455169 -82983311 + AT_rich Low_complexity Low_complexity 1 44 0 227 390 70 0 chr17 2455671 2455771 -82982709 - L2 LINE L2 -25 3247 3141 2087 126 3 0 chr17 2456611 2456905 -82981575 + AluSx SINE Alu 1 295 -17 2254 95 0 0 chr17 2460330 2460640 -82977840 + AluSx SINE Alu 1 310 0 236 331 88 11 chr17 2460871 2461052 -82977428 + L2 LINE L2 2329 2523 -791 1562 182 36 0 chr17 2463101 2463381 -82975099 + AluJo SINE Alu 1 290 -22 299 248 78 43 chr17 2463549 2463690 -82974790 - L2 LINE L2 0 3313 3168 1475 224 71 6 chr17 2464407 2464759 -82973721 - L1ME2 LINE L1 -21 6143 5769 893 247 151 49 chr17 2464908 2465439 -82973041 + L1MEc LINE L1 31 615 -5781 204 120 40 20 chr17 2465523 2465573 -82972907 + (TA)n Simple_repeat Simple_repeat 2 52 0 248 70 23 0 chr17 2465590 2465633 -82972847 + (TA)n Simple_repeat Simple_repeat 2 45 0 1070 106 0 0 chr17 2465636 2465777 -82972703 - AluSg/x SINE Alu -18 294 154 2229 118 0 16 chr17 2465785 2466091 -82972389 - AluSc SINE Alu -8 301 1 494 332 80 27 chr17 2466093 2466620 -82971860 - L1MB4 LINE L1 -859 5287 4733 336 278 128 0 chr17 2466876 2467009 -82971471 - L1ME2 LINE L1 -502 5660 5511 * 5004 36 24 36 chr17 2467005 2467663 -82970817 - L1PA5 LINE L1 -1188 4958 4309 7933 40 0 2 chr17 2467663 2468861 -82969619 + L1PA5 LINE L1 4957 6154 0 2271 107 0 0 chr17 2468975 2469273 -82969207 - AluSx SINE Alu -14 298 1 462 316 7 0 chr17 2469460 2469596 -82968884 + MIR SINE MIR 51 187 -75 415 301 34 0 chr17 2469667 2469813 -82968667 - MIR SINE MIR -48 214 64 187 318 118 0 chr17 2470900 2470985 -82967495 - MIR SINE MIR -56 152 58 441 293 145 40 chr17 2473095 2473494 -82964986 - L1MB4 LINE L1 -3026 3120 2680 308 246 16 82 chr17 2474141 2474263 -82964217 - HAL1b LINE L1 -441 907 794 770 286 64 75 chr17 2474308 2475131 -82963349 - HAL1b LINE L1 -437 911 98 22 0 0 0 chr17 2475360 2475382 -82963098 + AT_rich Low_complexity Low_complexity 1 22 0 3472 83 7 2 chr17 2475419 2475864 -82962616 - L1PA10 LINE L1 0 6168 5722 184 79 79 0 chr17 2478377 2478415 -82960065 + A-rich Low_complexity Low_complexity 2 42 0 237 98 0 0 chr17 2480424 2480465 -82958015 + (CA)n Simple_repeat Simple_repeat 2 42 0 525 259 77 79 chr17 2480557 2480998 -82957482 - L1ME LINE L1 -303 5818 5379 855 127 19 83 chr17 2480999 2481156 -82957324 - Tigger3(Golem) DNA MER2_type 0 3038 2892 300 258 16 0 chr17 2481169 2481231 -82957249 - Tigger3(Golem) DNA MER2_type -2966 63 1 264 100 0 0 chr17 2481265 2481305 -82957175 + (T)n Simple_repeat Simple_repeat 1 40 0 28 0 0 0 chr17 2481660 2481688 -82956792 + AT_rich Low_complexity Low_complexity 1 28 0 1238 227 64 24 chr17 2481746 2482121 -82956359 + L1ME LINE L1 451 840 -5230 769 213 11 32 chr17 2482115 2482303 -82956177 + L1PB4 LINE L1 5938 6121 -35 * 421 192 0 7 chr17 2482294 2482397 -82956083 + L1PB4 LINE L1 5987 6086 -68 * 396 204 231 0 chr17 2482368 2482476 -82956004 - MLT1D LTR MaLR -372 133 1 * 7050 54 10 11 chr17 2482476 2483634 -82954846 + L1PA7 LINE L1 4993 6154 0 189 352 68 0 chr17 2483635 2483723 -82954757 + MIR SINE MIR 157 250 -12 1733 171 7 3 chr17 2483740 2484045 -82954435 - AluJb SINE Alu -6 306 1 363 267 69 30 chr17 2484107 2484238 -82954242 - MIR SINE MIR -66 196 61 2246 91 3 0 chr17 2486027 2486324 -82952156 + AluSp SINE Alu 1 298 -15 269 94 47 16 chr17 2486505 2486569 -82951911 + GA-rich Low_complexity Low_complexity 1 66 0 215 337 22 11 chr17 2486896 2486985 -82951495 - L3 LINE CR1 -5 1572 1483 1882 99 32 7 chr17 2487136 2487418 -82951062 - AluY SINE Alu -22 289 1 641 239 6 44 chr17 2487572 2487731 -82950749 + MER5B DNA MER1_type 6 158 -20 539 213 7 85 chr17 2487995 2488020 -82950460 - MER5B DNA MER1_type -39 139 114 2384 57 0 7 chr17 2488020 2488317 -82950163 + AluSc SINE Alu 2 296 -13 539 213 7 85 chr17 2488317 2488432 -82950048 - MER5B DNA MER1_type -64 114 10 2504 37 0 3 chr17 2488981 2489279 -82949201 + AluY SINE Alu 1 297 -14 1840 127 22 0 chr17 2489737 2490041 -82948439 - AluSx SINE Alu 0 310 1 723 232 41 5 chr17 2490198 2490392 -82948088 - L1MA9 LINE L1 -39 6273 6073 537 253 126 16 chr17 2491737 2491919 -82946561 - L2 LINE L2 0 3313 3112 195 25 75 25 chr17 2492151 2492191 -82946289 + T-rich Low_complexity Low_complexity 4 45 0 2303 59 3 20 chr17 2492323 2492629 -82945851 + AluY SINE Alu 1 301 -10 26 0 0 0 chr17 2492997 2493023 -82945457 + AT_rich Low_complexity Low_complexity 1 26 0 6595 64 9 32 chr17 2493248 2494899 -82943581 + SVA Other Other 200 1386 0 237 319 121 17 chr17 2494918 2495034 -82943446 - L3 LINE CR1 -48 1529 1402 1046 190 121 6 chr17 2495732 2496026 -82942454 - MLT1A1 LTR MaLR 0 374 4 357 362 28 11 chr17 2497077 2497254 -82941226 - MER5A DNA MER1_type -3 186 7 209 363 59 15 chr17 2497363 2497498 -82940982 - MIR3 SINE MIR -66 142 2 278 236 0 132 chr17 2497583 2497689 -82940791 + MIR SINE MIR 28 119 -143 752 272 112 4 chr17 2497705 2497937 -82940543 + MIR SINE MIR 6 262 0 291 309 147 29 chr17 2498156 2498292 -82940188 + MIR3 SINE MIR 17 168 -40 1825 70 4 0 chr17 2498973 2499214 -82939266 + AluSq SINE Alu 64 305 -8 2314 65 0 7 chr17 2499566 2499872 -82938608 + AluY SINE Alu 1 304 -7 2107 87 0 0 chr17 2499971 2500247 -82938233 + AluSx SINE Alu 1 276 -36 242 114 0 23 chr17 2500259 2500303 -82938177 + (GGGA)n Simple_repeat Simple_repeat 2 44 0 180 0 0 0 chr17 2500305 2500325 -82938155 + (GGAAA)n Simple_repeat Simple_repeat 1 20 0 280 255 268 33 chr17 2501540 2501693 -82936787 + MIR SINE MIR 74 262 0 195 264 0 38 chr17 2501703 2501756 -82936724 - MIR SINE MIR 0 262 212 227 298 21 53 chr17 2502050 2502144 -82936336 + L3 LINE CR1 1279 1369 -208 22 56 0 0 chr17 2502190 2502226 -82936254 + AT_rich Low_complexity Low_complexity 1 36 0 2133 86 11 0 chr17 2502589 2502893 -82935587 - AluSq SINE Alu 0 308 2 263 320 80 51 chr17 2503956 2504131 -82934349 + MIR SINE MIR 17 196 -66 2186 65 0 0 chr17 2506006 2506282 -82932198 + AluY SINE Alu 35 310 -1 2307 68 0 10 chr17 2506699 2506994 -82931486 + AluY SINE Alu 1 292 -19 432 340 114 40 chr17 2507537 2508011 -82930469 + L2 LINE L2 2350 2858 -456 208 303 69 41 chr17 2508060 2508205 -82930275 - L2 LINE L2 -852 2462 2314 491 255 64 43 chr17 2508205 2508393 -82930087 - MLT1J LTR MaLR -13 498 307 1640 178 0 26 chr17 2508911 2508991 -82929489 + AluJo SINE Alu 1 82 -230 4196 118 25 67 chr17 2508991 2509712 -82928768 - LTR8 LTR ERV1 0 691 1 1640 178 0 26 chr17 2509712 2509934 -82928546 + AluJo SINE Alu 82 295 -17 298 333 65 38 chr17 2511301 2511487 -82926993 + MIR SINE MIR 46 236 -26 24 0 0 0 chr17 2511567 2511591 -82926889 + AT_rich Low_complexity Low_complexity 1 24 0 1355 37 0 0 chr17 2511591 2511752 -82926728 - L1PA4 LINE L1 -3 6152 5992 1881 133 27 3 chr17 2512453 2512754 -82925726 - AluSx SINE Alu -4 308 1 301 268 89 8 chr17 2512887 2513010 -82925470 + L2 LINE L2 2927 3059 -213 422 282 110 6 chr17 2513041 2513204 -82925276 - L2 LINE L2 -7 3306 3127 554 217 59 12 chr17 2513368 2513613 -82924867 - MER5C DNA MER1_type -1 323 9 1741 149 35 0 chr17 2513816 2514105 -82924375 - AluJo SINE Alu -10 302 4 827 94 0 0 chr17 2514216 2514333 -82924147 + AluSp/q SINE Alu 188 304 -9 1573 236 52 11 chr17 2514481 2514733 -82923747 - LTR40b LTR ERVL 0 462 183 2379 70 0 3 chr17 2514733 2515032 -82923448 - AluSq SINE Alu -15 298 1 1573 236 52 11 chr17 2515032 2515223 -82923257 - LTR40b LTR ERVL -279 183 1 23 33 0 0 chr17 2515537 2515567 -82922913 + AT_rich Low_complexity Low_complexity 1 30 0 339 65 0 0 chr17 2515839 2515885 -82922595 + (TG)n Simple_repeat Simple_repeat 1 46 0 395 282 126 11 chr17 2516488 2516662 -82921818 - MLT1L LTR MaLR -413 202 9 2064 131 0 0 chr17 2517173 2517479 -82921001 + AluSx SINE Alu 1 306 -6 771 241 72 62 chr17 2518355 2518780 -82919700 + L1ME LINE L1 5344 5777 -385 342 195 133 9 chr17 2519055 2519168 -82919312 + L1MC2 LINE L1 6218 6344 0 551 366 51 6 chr17 2519773 2520087 -82918393 + L3 LINE CR1 520 847 -730 333 360 55 6 chr17 2520091 2520255 -82918225 + L3 LINE CR1 1012 1183 -394 2052 127 7 3 chr17 2520263 2520571 -82917909 + AluSx SINE Alu 1 309 -3 273 308 64 39 chr17 2520579 2520666 -82917814 + L3 LINE CR1 1276 1370 -207 1928 153 3 0 chr17 2520666 2520974 -82917506 - AluJo SINE Alu -2 310 2 273 308 64 39 chr17 2520974 2521042 -82917438 + L3 LINE CR1 1370 1435 -142 880 253 91 103 chr17 2521259 2521785 -82916695 + MLT1H LTR MaLR 30 549 0 2060 136 0 3 chr17 2522198 2522506 -82915974 - AluSx SINE Alu -5 307 1 378 333 165 7 chr17 2522513 2522798 -82915682 - L3 LINE CR1 -389 1188 859 249 168 182 0 chr17 2522819 2522884 -82915596 + MER5A DNA MER1_type 7 98 -91 2056 99 0 53 chr17 2523962 2524285 -82914195 + AluSx SINE Alu 1 306 -6 203 178 0 22 chr17 2524359 2524404 -82914076 + (CTGGGG)n Simple_repeat Simple_repeat 6 49 0 746 233 30 6 chr17 2524739 2524932 -82913548 - MER4C LTR ERV1 0 456 276 1879 121 22 35 chr17 2524951 2525264 -82913216 + AluSx SINE Alu 1 309 -3 530 160 19 122 chr17 2525306 2525413 -82913067 - MER4C LTR ERV1 -201 349 290 2132 110 0 0 chr17 2525413 2525713 -82912767 + AluSx SINE Alu 7 306 -6 530 160 19 122 chr17 2525713 2525839 -82912641 - MER4C LTR ERV1 -260 290 153 306 261 0 0 chr17 2525876 2525941 -82912539 - MIR SINE MIR -152 110 46 1769 151 35 0 chr17 2525943 2526227 -82912253 + AluSx SINE Alu 1 294 -18 1895 131 3 0 chr17 2526586 2526876 -82911604 + AluSx SINE Alu 1 291 -21 247 375 18 0 chr17 2527526 2527638 -82910842 - MIR SINE MIR -62 146 33 457 222 67 22 chr17 2528014 2528149 -82910331 + MIR3 SINE MIR 33 173 -35 514 140 39 39 chr17 2528316 2528495 -82909985 + CT-rich Low_complexity Low_complexity 1 179 0 223 167 0 24 chr17 2528495 2528537 -82909943 + C-rich Low_complexity Low_complexity 2 42 0 302 266 156 40 chr17 2528886 2529187 -82909293 - L2 LINE L2 -11 3261 2926 1951 108 3 0 chr17 2529322 2529610 -82908870 + AluSq SINE Alu 21 309 -4 189 94 0 0 chr17 2530108 2530140 -82908340 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 790 133 9 0 chr17 2530142 2530255 -82908225 - AluJo SINE Alu -33 279 166 795 141 0 8 chr17 2530399 2530520 -82907960 - AluJo SINE Alu -146 166 47 1944 96 55 17 chr17 2530617 2530908 -82907572 + AluSx SINE Alu 1 302 -10 2194 76 24 0 chr17 2530913 2531202 -82907278 + AluY SINE Alu 2 297 -14 478 291 59 97 chr17 2531221 2531587 -82906893 + L1MC4a LINE L1 5260 5149 -1013 2248 85 0 0 chr17 2531587 2531880 -82906600 - AluSx SINE Alu -19 293 1 478 291 59 97 chr17 2531880 2532203 -82906277 + L1MC4a LINE L1 5148 5482 -680 1776 137 7 10 chr17 2532367 2532649 -82905831 + AluJb SINE Alu 1 283 -29 207 61 0 30 chr17 2532649 2532682 -82905798 + (TAAAA)n Simple_repeat Simple_repeat 2 100 0 23 0 0 0 chr17 2532755 2532778 -82905702 + AT_rich Low_complexity Low_complexity 1 23 0 186 250 132 0 chr17 2532867 2532943 -82905537 - MIR SINE MIR -79 183 98 772 97 142 0 chr17 2532943 2533056 -82905424 + AluSc SINE Alu 154 282 -27 331 26 0 0 chr17 2533056 2533095 -82905385 + (TAAA)n Simple_repeat Simple_repeat 2 68 0 308 304 69 0 chr17 2533540 2533642 -82904838 - L2 LINE L2 0 3272 3164 2328 96 0 7 chr17 2534079 2534382 -82904098 + AluSx SINE Alu 1 301 -11 405 302 129 16 chr17 2534796 2534939 -82903541 + L2 LINE L2 3037 3162 -151 2337 86 10 16 chr17 2534939 2535252 -82903228 - AluSx SINE Alu -1 311 1 405 302 129 16 chr17 2535252 2535356 -82903124 + L2 LINE L2 3162 3312 -1 239 307 44 18 chr17 2536268 2536382 -82902098 + L2 LINE L2 2705 2821 -493 2294 114 3 0 chr17 2536994 2537301 -82901179 - AluSg SINE Alu -2 308 1 2205 118 0 7 chr17 2537526 2537832 -82900648 - AluJb SINE Alu -8 304 1 188 280 84 28 chr17 2537860 2537967 -82900513 + L3 LINE CR1 1453 1565 -12 2009 126 4 0 chr17 2538026 2538304 -82900176 - AluSx SINE Alu -33 279 1 1140 88 0 0 chr17 2538304 2538441 -82900039 - AluSq/x SINE Alu -175 137 1 2454 97 3 0 chr17 2538954 2539263 -82899217 - AluSq SINE Alu -3 310 1 2032 115 45 0 chr17 2539501 2539789 -82898691 - AluSx SINE Alu -11 301 1 428 233 60 17 chr17 2540619 2540735 -82897745 + MIR3 SINE MIR 82 202 -6 2441 103 0 0 chr17 2540789 2541100 -82897380 + AluSq SINE Alu 1 311 -2 25 31 0 0 chr17 2541120 2541152 -82897328 + AT_rich Low_complexity Low_complexity 1 32 0 260 235 224 20 chr17 2543064 2543162 -82895318 + L3 LINE CR1 1447 1564 -13 263 293 71 36 chr17 2543666 2543806 -82894674 - MIR3 SINE MIR -56 152 8 6902 55 6 8 chr17 2545014 2545981 -82892499 + L1PA8A LINE L1 5163 6127 -4 203 138 0 0 chr17 2546340 2546369 -82892111 + (TTG)n Simple_repeat Simple_repeat 2 30 0 1836 98 124 0 chr17 2546403 2546669 -82891811 - AluSq SINE Alu -14 299 1 201 276 17 17 chr17 2547581 2547639 -82890841 - L3 LINE CR1 -7 1570 1513 * 233 274 59 88 chr17 2547628 2547730 -82890750 - MER5B DNA MER1_type -4 174 76 2421 97 0 0 chr17 2547922 2548232 -82890248 - AluSg SINE Alu 0 310 1 754 269 187 35 chr17 2548540 2548946 -82889534 - L2 LINE L2 -1 3312 2845 209 309 117 97 chr17 2549020 2549088 -82889392 + MER5B DNA MER1_type 18 83 -106 390 214 79 84 chr17 2549088 2549150 -82889330 - MER5B DNA MER1_type -1 177 116 2283 84 10 3 chr17 2549150 2549446 -82889034 + AluY SINE Alu 1 298 -13 390 214 79 84 chr17 2549446 2549561 -82888919 - MER5B DNA MER1_type -62 116 1 209 309 117 97 chr17 2549561 2549658 -82888822 + MER5B DNA MER1_type 83 189 0 292 204 46 99 chr17 2549736 2549888 -82888592 + L1ME1 LINE L1 6005 6148 -18 364 260 55 87 chr17 2549902 2550029 -82888451 - MER5B DNA MER1_type -49 129 7 328 272 0 0 chr17 2550099 2550180 -82888300 - MER5A DNA MER1_type -80 109 29 * 364 235 202 8 chr17 2550176 2550295 -82888185 + MER5A DNA MER1_type 48 189 0 200 351 90 9 chr17 2550467 2550578 -82887902 + L2 LINE L2 3186 3305 -8 1942 147 7 10 chr17 2550713 2551013 -82887467 - AluJo SINE Alu -13 299 1 345 291 86 0 chr17 2551495 2551612 -82886868 + L2 LINE L2 3187 3313 0 13203 126 48 43 chr17 2551773 2552866 -82885614 + Tigger1 DNA MER2_type 11 1097 -1321 2490 69 0 7 chr17 2552866 2553169 -82885311 - AluY SINE Alu -10 301 1 13203 126 48 43 chr17 2553169 2554034 -82884446 + Tigger1 DNA MER2_type 1097 1987 -431 2175 121 0 7 chr17 2554034 2554340 -82884140 + AluSx SINE Alu 1 304 -8 13203 126 48 43 chr17 2554340 2554775 -82883705 + Tigger1 DNA MER2_type 1987 2418 0 267 31 0 0 chr17 2555568 2555600 -82882880 + (TGAA)n Simple_repeat Simple_repeat 2 33 0 590 231 8 45 chr17 2556157 2556291 -82882189 + MIR SINE MIR 121 249 -13 2359 108 0 3 chr17 2556910 2557224 -82881256 - AluSp SINE Alu 0 313 1 420 327 133 65 chr17 2557251 2557766 -82880714 + L2 LINE L2 2724 3270 -2 2391 106 0 0 chr17 2558112 2558423 -82880057 - AluSx SINE Alu -1 311 1 2051 125 0 3 chr17 2559044 2559333 -82879147 + AluSx SINE Alu 22 309 -3 258 105 0 0 chr17 2559354 2559392 -82879088 + (GGGA)n Simple_repeat Simple_repeat 4 41 0 190 265 20 0 chr17 2559654 2559703 -82878777 + MIR SINE MIR 168 217 -45 252 298 21 0 chr17 2560162 2560256 -82878224 + L1ME LINE L1 5558 5653 -468 6526 24 0 0 chr17 2560531 2561279 -82877201 + L1PA3 LINE L1 5408 6155 0 1097 24 0 0 chr17 2561467 2561593 -82876887 + L1PA5 LINE L1 6020 6145 -9 219 307 94 8 chr17 2561925 2562052 -82876428 + L2 LINE L2 2945 3082 -190 634 184 0 0 chr17 2562117 2562226 -82876254 - MER63 DNA MER1_type 0 1061 953 1585 127 19 0 chr17 2562232 2562491 -82875989 + L1MA9 LINE L1 6044 6307 -5 879 242 33 25 chr17 2562520 2562580 -82875900 - MER63 DNA MER1_type -96 966 908 2153 125 0 3 chr17 2562580 2562867 -82875613 + AluSx SINE Alu 1 288 -24 197 32 0 32 chr17 2562867 2562898 -82875582 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 2153 125 0 3 chr17 2562898 2562913 -82875567 + AluSx SINE Alu 288 302 -10 879 242 33 25 chr17 2562913 2563096 -82875384 - MER63 DNA MER1_type -154 908 721 897 170 105 0 chr17 2563098 2563298 -82875182 + MER44D DNA MER2_type 1 491 -118 2151 93 11 0 chr17 2563354 2563632 -82874848 + AluSx SINE Alu 30 310 -2 298 127 28 42 chr17 2563634 2563705 -82874775 - MER63 DNA MER1_type -740 190 121 * 721 149 0 25 chr17 2563703 2563824 -82874656 + MER44D DNA MER2_type 488 605 0 * 2178 189 38 34 chr17 2563824 2564224 -82874256 - MER63C DNA MER1_type -472 588 191 2262 114 7 0 chr17 2564224 2564530 -82873950 + AluSx SINE Alu 1 308 -4 2178 189 38 34 chr17 2564530 2564680 -82873800 - MER63C DNA MER1_type -869 191 33 258 32 0 0 chr17 2564680 2564711 -82873769 + (CA)n Simple_repeat Simple_repeat 2 32 0 2178 189 38 34 chr17 2564711 2564745 -82873735 - MER63C DNA MER1_type -1027 33 1 228 279 0 44 chr17 2564873 2564941 -82873539 + MIR SINE MIR 79 143 -65 832 188 0 0 chr17 2565476 2565609 -82872871 + FLAM_C SINE Alu 1 133 0 2258 89 0 0 chr17 2565824 2566105 -82872375 - AluSx SINE Alu -30 282 2 1158 201 82 11 chr17 2566129 2566408 -82872072 + L1MB2 LINE L1 5868 6166 -5 2058 109 31 14 chr17 2566408 2566701 -82871779 - AluSx SINE Alu -14 298 1 2185 125 3 0 chr17 2566983 2567287 -82871193 + AluSq SINE Alu 1 305 -8 333 137 0 0 chr17 2567379 2567430 -82871050 - Alu SINE Alu -253 55 5 317 269 82 113 chr17 2567921 2568371 -82870109 + L2 LINE L2 2837 3272 0 442 201 8 8 chr17 2568371 2568505 -82869975 + (TGGA)n Simple_repeat Simple_repeat 2 135 0 203 376 24 8 chr17 2568517 2568642 -82869838 + (TGGG)n Simple_repeat Simple_repeat 1 127 0 190 337 58 0 chr17 2568661 2568747 -82869733 - MIR SINE MIR -113 149 59 260 225 202 0 chr17 2569500 2569589 -82868891 + MIR3 SINE MIR 82 188 -20 391 279 51 7 chr17 2570025 2570199 -82868281 + MIR3 SINE MIR 4 184 -67 414 269 30 78 chr17 2571497 2571560 -82866920 + MER5B DNA MER1_type 1 65 -113 2386 102 3 3 chr17 2571560 2571873 -82866607 + AluSq SINE Alu 1 313 0 414 269 30 78 chr17 2571873 2571976 -82866504 + MER5B DNA MER1_type 65 159 -19 1337 217 174 49 chr17 2573880 2574283 -82864197 + L2 LINE L2 2607 2958 -355 2368 93 0 0 chr17 2574283 2574583 -82863897 - AluSc SINE Alu -9 300 1 1337 217 174 49 chr17 2574583 2574794 -82863686 + L2 LINE L2 2958 3313 0 910 116 20 20 chr17 2575057 2575204 -82863276 + AluSg/x SINE Alu 161 307 -5 304 286 18 78 chr17 2575214 2575431 -82863049 + L1ME1 LINE L1 5955 6158 -8 2330 108 0 3 chr17 2625776 2626090 -82812390 - AluSp SINE Alu 0 313 1 295 367 72 4 chr17 2626117 2626354 -82812126 + L2 LINE L2 2724 2976 -338 278 284 102 31 chr17 2626505 2626632 -82811848 + L2 LINE L2 3176 3311 -2 2367 104 0 0 chr17 2626981 2627289 -82811191 - AluSx SINE Alu -4 308 1 2014 125 0 3 chr17 2627910 2628199 -82810281 + AluSx SINE Alu 22 309 -3 258 105 0 0 chr17 2628220 2628258 -82810222 + (GGGA)n Simple_repeat Simple_repeat 4 41 0 269 298 21 0 chr17 2629028 2629122 -82809358 + L1ME LINE L1 5558 5653 -468 6111 18 0 0 chr17 2629397 2630080 -82808400 + L1PA3 LINE L1 5408 6090 -65 500 246 8 45 chr17 2630654 2630788 -82807692 - MIR SINE MIR -13 249 121 267 31 0 0 chr17 2631345 2631377 -82807103 + (TTCA)n Simple_repeat Simple_repeat 2 33 0 11100 117 31 48 chr17 2632170 2632605 -82805875 - Tigger1 DNA MER2_type 0 2418 1977 2149 121 0 7 chr17 2632605 2632911 -82805569 - AluSx SINE Alu -8 304 1 11100 117 31 48 chr17 2632911 2633776 -82804704 - Tigger1 DNA MER2_type -441 1977 1153 2476 67 0 7 chr17 2633776 2634081 -82804399 + AluY SINE Alu 1 298 -13 11100 117 31 48 chr17 2634081 2634649 -82803831 - Tigger1 DNA MER2_type -1265 1153 577 223 327 27 9 chr17 2635033 2635143 -82803337 + L2 LINE L2 2971 3082 -190 648 184 0 0 chr17 2635208 2635317 -82803163 - MER63 DNA MER1_type 0 1061 953 1649 127 19 0 chr17 2635323 2635582 -82802898 + L1MA9 LINE L1 6044 6307 -5 896 242 33 25 chr17 2635611 2635671 -82802809 - MER63 DNA MER1_type -96 965 907 2044 125 0 3 chr17 2635671 2635958 -82802522 + AluSx SINE Alu 1 288 -24 197 32 0 32 chr17 2635958 2635989 -82802491 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 2044 125 0 3 chr17 2635989 2636004 -82802476 + AluSx SINE Alu 288 302 -10 896 242 33 25 chr17 2636004 2636187 -82802293 - MER63 DNA MER1_type -154 907 720 887 170 105 0 chr17 2636189 2636389 -82802091 + MER44D DNA MER2_type 1 491 -118 2042 93 11 0 chr17 2636445 2636723 -82801757 + AluSx SINE Alu 30 310 -2 288 127 28 42 chr17 2636725 2636796 -82801684 - MER63 DNA MER1_type -740 190 121 * 724 149 0 25 chr17 2636794 2636915 -82801565 + MER44D DNA MER2_type 488 605 0 * 2147 189 38 34 chr17 2636915 2637315 -82801165 - MER63C DNA MER1_type -472 588 191 2143 117 3 0 chr17 2637315 2637622 -82800858 + AluSx SINE Alu 1 308 -4 2147 189 38 34 chr17 2637622 2637772 -82800708 - MER63C DNA MER1_type -869 191 33 258 32 0 0 chr17 2637772 2637803 -82800677 + (CA)n Simple_repeat Simple_repeat 2 32 0 2147 189 38 34 chr17 2637803 2637837 -82800643 - MER63C DNA MER1_type -1027 33 1 220 281 0 0 chr17 2637975 2638032 -82800448 + MIR SINE MIR 87 143 -65 832 188 0 0 chr17 2638568 2638701 -82799779 + FLAM_C SINE Alu 1 133 0 2143 89 0 0 chr17 2638916 2639197 -82799283 - AluSx SINE Alu -30 282 2 1170 201 82 11 chr17 2639221 2639500 -82798980 + L1MB2 LINE L1 5868 6166 -5 1937 109 31 14 chr17 2639500 2639793 -82798687 - AluSx SINE Alu -14 298 1 2074 125 3 0 chr17 2640075 2640379 -82798101 + AluSq SINE Alu 1 305 -8 348 137 0 0 chr17 2640471 2640522 -82797958 - Alu SINE Alu -245 55 5 333 291 98 85 chr17 2641064 2641463 -82797017 + L2 LINE L2 2869 3272 0 442 201 8 8 chr17 2641463 2641597 -82796883 + (TGGA)n Simple_repeat Simple_repeat 2 135 0 203 376 24 8 chr17 2641609 2641734 -82796746 + (TGGG)n Simple_repeat Simple_repeat 1 127 0 184 337 58 0 chr17 2641753 2641839 -82796641 - MIR SINE MIR -113 149 59 6981 55 17 0 chr17 2642935 2643902 -82794578 - L1PA8A LINE L1 -4 6127 5163 246 321 57 21 chr17 2645110 2645250 -82793230 + MIR3 SINE MIR 8 152 -56 237 280 196 9 chr17 2645745 2645852 -82792628 - L3 LINE CR1 -4 1573 1447 25 31 0 0 chr17 2647764 2647796 -82790684 + AT_rich Low_complexity Low_complexity 1 32 0 2313 105 0 0 chr17 2647814 2648127 -82790353 - AluSq SINE Alu 0 313 1 404 233 60 17 chr17 2648181 2648297 -82790183 - MIR3 SINE MIR -6 202 82 1926 111 49 0 chr17 2649127 2649415 -82789065 + AluSq SINE Alu 1 302 -11 2325 97 3 0 chr17 2649653 2649962 -82788518 + AluSq SINE Alu 1 310 -3 1081 88 0 0 chr17 2650475 2650612 -82787868 + AluSq/x SINE Alu 1 137 -175 1901 126 4 0 chr17 2650612 2650890 -82787590 + AluSx SINE Alu 1 279 -33 473 346 197 10 chr17 2650939 2651084 -82787396 - L3 LINE CR1 -2 1575 1458 1990 134 0 7 chr17 2651084 2651390 -82787090 + AluJb SINE Alu 1 304 -8 473 346 197 10 chr17 2651390 2651555 -82786925 - L3 LINE CR1 -119 1458 1325 2108 138 0 3 chr17 2651555 2651867 -82786613 - AluSx SINE Alu -1 311 1 473 346 197 10 chr17 2651867 2652159 -82786321 - L3 LINE CR1 -252 1325 859 238 149 149 0 chr17 2652198 2652245 -82786235 + MER5A DNA MER1_type 45 98 -91 1073 96 11 0 chr17 2653073 2653250 -82785230 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 780 121 0 0 chr17 2653266 2653398 -82785082 + (TGGA)n Simple_repeat Simple_repeat 3 134 0 203 167 0 21 chr17 2653520 2653568 -82784912 + C-rich Low_complexity Low_complexity 2 48 0 338 266 156 40 chr17 2653917 2654218 -82784262 - L2 LINE L2 -11 3261 2926 1988 108 3 0 chr17 2654353 2654641 -82783839 + AluSq SINE Alu 21 309 -4 811 148 0 21 chr17 2655137 2655279 -82783201 - AluJo SINE Alu 0 312 174 456 149 0 14 chr17 2655434 2655508 -82782972 - AluJo SINE Alu -146 166 94 382 281 51 7 chr17 2656070 2656244 -82782236 + MIR3 SINE MIR 4 184 -67 419 309 51 34 chr17 2657542 2657605 -82780875 + MER5B DNA MER1_type 1 61 -117 2070 96 3 17 chr17 2657605 2657930 -82780550 + AluSq SINE Alu 1 313 0 419 309 51 34 chr17 2657930 2658041 -82780439 + MER5B DNA MER1_type 61 178 0 1235 225 171 45 chr17 2659927 2660330 -82778150 + L2 LINE L2 2607 2958 -355 2253 93 0 0 chr17 2660330 2660631 -82777849 - AluSc SINE Alu -8 301 1 1235 225 171 45 chr17 2660631 2660842 -82777638 + L2 LINE L2 2958 3313 0 850 128 20 34 chr17 2661105 2661253 -82777227 + AluSc SINE Alu 159 304 -5 352 290 18 77 chr17 2661259 2661480 -82777000 + L1ME1 LINE L1 5951 6158 -8 238 267 238 0 chr17 2661605 2661710 -82776770 + MIR SINE MIR 17 146 -62 457 178 12 41 chr17 2661962 2662131 -82776349 + CT-rich Low_complexity Low_complexity 4 167 0 326 302 86 37 chr17 2662254 2662522 -82775958 + L1MC4a LINE L1 5652 5932 -1876 1814 137 7 10 chr17 2662678 2663003 -82775477 + AluJb SINE Alu 1 312 0 23 0 0 0 chr17 2663066 2663089 -82775391 + AT_rich Low_complexity Low_complexity 1 23 0 183 250 132 0 chr17 2663178 2663254 -82775226 - MIR SINE MIR -79 183 98 767 97 142 0 chr17 2663254 2663406 -82775074 + AluSc SINE Alu 154 321 0 293 325 57 8 chr17 2663851 2663974 -82774506 - L2 LINE L2 0 3313 3185 2206 96 0 7 chr17 2664390 2664693 -82773787 + AluSx SINE Alu 1 301 -11 2221 90 10 6 chr17 2665252 2665563 -82772917 - AluSx SINE Alu 0 312 1 365 265 20 10 chr17 2665565 2665667 -82772813 + L2 LINE L2 3169 3271 -1 238 307 44 18 chr17 2666579 2666693 -82771787 + L2 LINE L2 2705 2821 -493 2168 114 3 0 chr17 2667305 2667612 -82770868 - AluSg SINE Alu -2 308 1 2082 99 0 53 chr17 2668021 2668344 -82770136 + AluSx SINE Alu 1 306 -6 203 178 0 22 chr17 2668418 2668463 -82770017 + (CTGGGG)n Simple_repeat Simple_repeat 6 49 0 753 235 18 10 chr17 2668798 2668991 -82769489 - MER4C LTR ERV1 0 456 276 1893 119 26 35 chr17 2669010 2669322 -82769158 + AluSx SINE Alu 1 309 -3 514 165 19 122 chr17 2669364 2669471 -82769009 - MER4C LTR ERV1 -201 349 290 2162 110 0 0 chr17 2669471 2669771 -82768709 + AluSx SINE Alu 7 306 -6 514 165 19 122 chr17 2669771 2669897 -82768583 - MER4C LTR ERV1 -260 290 153 297 261 0 0 chr17 2669934 2669999 -82768481 - MIR SINE MIR -152 110 46 1798 151 35 0 chr17 2670001 2670285 -82768195 + AluSx SINE Alu 1 294 -18 1929 131 3 0 chr17 2670644 2670934 -82767546 + AluSx SINE Alu 1 291 -21 261 375 18 0 chr17 2671584 2671696 -82766784 - MIR SINE MIR -62 146 33 442 222 67 22 chr17 2672072 2672207 -82766273 + MIR3 SINE MIR 33 173 -35 560 277 20 7 chr17 2672544 2672692 -82765788 - L2 LINE L2 -3 3310 3161 851 177 30 3 chr17 2672827 2673206 -82765274 + (TGGA)n Simple_repeat Simple_repeat 1 389 0 770 121 42 0 chr17 2673222 2673388 -82765092 + (TGGA)n Simple_repeat Simple_repeat 1 173 0 2524 56 0 0 chr17 2673827 2674132 -82764348 - AluY SINE Alu -6 305 1 2227 112 0 13 chr17 2675179 2675492 -82762988 - AluSg SINE Alu 0 310 2 225 0 0 0 chr17 2675492 2675517 -82762963 + (TTTTC)n Simple_repeat Simple_repeat 2 26 0 2245 81 0 3 chr17 2675517 2675802 -82762678 - AluSx SINE Alu -28 284 1 314 314 133 26 chr17 2676299 2676751 -82761729 + L2 LINE L2 2306 2805 -509 298 293 73 32 chr17 2677478 2677601 -82760879 - MIR SINE MIR -8 254 127 290 340 112 5 chr17 2678533 2678730 -82759750 - L3 LINE CR1 -396 1181 964 2224 98 3 3 chr17 2679206 2679513 -82758967 + AluSx SINE Alu 4 310 -2 517 304 63 8 chr17 2681617 2681837 -82756643 + MIR SINE MIR 32 260 -2 1404 113 24 0 chr17 2683017 2683230 -82755250 + AluSg/x SINE Alu 95 312 0 2850 150 30 35 chr17 2683358 2683734 -82754746 + L1MC1 LINE L1 5413 5786 -547 2050 130 0 9 chr17 2683734 2684049 -82754431 + AluSx SINE Alu 1 312 0 2850 150 30 35 chr17 2684049 2684239 -82754241 + L1MC1 LINE L1 5786 5976 -357 1986 136 3 3 chr17 2684239 2684541 -82753939 + AluJb SINE Alu 1 302 -10 1926 128 13 13 chr17 2684552 2684856 -82753624 + AluJo SINE Alu 1 304 -8 2114 125 3 0 chr17 2685020 2685323 -82753157 + AluSx SINE Alu 1 304 -8 583 313 99 0 chr17 2685490 2685682 -82752798 + MIR SINE MIR 2 212 -50 10561 49 14 17 chr17 2686048 2687438 -82751042 - SVA Other Other 0 1386 1 216 0 0 0 chr17 2687438 2687462 -82751018 + (GGGAGA)n Simple_repeat Simple_repeat 2 25 0 414 157 14 171 chr17 2687498 2687638 -82750842 - MER58B DNA MER1_type -1 340 223 288 172 0 0 chr17 2687644 2687702 -82750778 + (CA)n Simple_repeat Simple_repeat 2 59 0 2372 91 0 0 chr17 2688243 2688551 -82749929 + AluSq SINE Alu 1 308 -5 2089 130 0 9 chr17 2688562 2688877 -82749603 + AluSq SINE Alu 1 312 -1 2181 97 3 37 chr17 2689432 2689753 -82748727 + AluSq SINE Alu 4 313 0 318 182 11 11 chr17 2690057 2690148 -82748332 + Alu SINE Alu 240 301 0 2651 39 0 0 chr17 2690393 2690704 -82747776 + AluY SINE Alu 1 311 0 368 338 0 0 chr17 2690919 2691058 -82747422 + L1MEc LINE L1 35 173 -6223 2009 128 0 44 chr17 2691112 2691258 -82747222 + AluSx SINE Alu 1 152 -160 3139 38 0 3 chr17 2691258 2691630 -82746850 + L1PA5 LINE L1 5782 6152 -2 2009 128 0 44 chr17 2691630 2691804 -82746676 + AluSx SINE Alu 152 307 -5 370 378 15 5 chr17 2691806 2692010 -82746470 + L1MEc LINE L1 165 370 -6026 714 154 18 77 chr17 2692375 2692460 -82746020 + L1MB4 LINE L1 5978 6067 -113 1917 86 79 7 chr17 2692460 2692740 -82745740 + AluSx SINE Alu 1 300 -12 714 154 18 77 chr17 2692740 2692863 -82745617 + L1MB4 LINE L1 6067 6174 -6 2255 97 0 10 chr17 2693060 2693368 -82745112 - AluSx SINE Alu -7 305 1 844 258 22 45 chr17 2694903 2695048 -82743432 + MIR SINE MIR 2 140 -122 2276 110 0 0 chr17 2695048 2695357 -82743123 + AluSx SINE Alu 1 309 -3 844 258 22 45 chr17 2695357 2695478 -82743002 + MIR SINE MIR 140 262 0 419 238 98 0 chr17 2696459 2696581 -82741899 - MER91B DNA MER1_type -56 134 1 2645 199 30 47 chr17 2696989 2697011 -82741469 + L1MC4 LINE L1 6907 6928 -1114 1905 80 113 0 chr17 2697011 2697286 -82741194 + AluSx SINE Alu 1 306 -6 2645 199 30 47 chr17 2697286 2697547 -82740933 + L1MC4 LINE L1 6928 7192 -850 2104 118 0 0 chr17 2697547 2697843 -82740637 + AluSx SINE Alu 3 298 -14 2645 199 30 47 chr17 2697843 2698288 -82740192 + L1MC4 LINE L1 7192 7624 -418 1820 115 39 21 chr17 2698288 2698574 -82739906 + AluSx SINE Alu 1 291 -21 2289 95 0 22 chr17 2698579 2698714 -82739766 + AluSx SINE Alu 1 137 -175 2323 79 0 0 chr17 2698714 2699012 -82739468 + AluY SINE Alu 1 299 -8 270 81 0 0 chr17 2699012 2699049 -82739431 + (TA)n Simple_repeat Simple_repeat 2 38 0 2289 95 0 22 chr17 2699053 2699234 -82739246 + AluSx SINE Alu 137 310 -2 2078 95 0 18 chr17 2700376 2700715 -82737765 + AluSg SINE Alu 1 334 0 1155 134 70 0 chr17 2700727 2700913 -82737567 + AluSx SINE Alu 1 199 -113 3096 144 8 16 chr17 2701034 2701548 -82736932 + L1PA16 LINE L1 5651 6160 -6 2224 107 0 0 chr17 2701826 2702125 -82736355 - AluSx SINE Alu -13 299 1 504 154 5 199 chr17 2702175 2702376 -82736104 + MER20 DNA MER1_type 1 162 -57 200 204 45 0 chr17 2702680 2702724 -82735756 - L2 LINE L2 -2 3311 3266 2280 77 7 7 chr17 2703083 2703382 -82735098 + AluSx SINE Alu 1 299 -13 623 136 164 9 chr17 2703493 2703603 -82734877 - FLAM_A SINE Alu -6 136 10 2352 68 0 3 chr17 2703953 2704247 -82734233 + AluSc SINE Alu 1 293 -16 2562 61 0 0 chr17 2704256 2704567 -82733913 + AluY SINE Alu 1 311 0 978 189 0 0 chr17 2704587 2704751 -82733729 + FRAM SINE Alu 2 165 -1 2216 91 3 7 chr17 2705039 2705335 -82733145 + AluSq SINE Alu 6 300 -13 2211 85 26 0 chr17 2706359 2706664 -82731816 + AluSp SINE Alu 1 313 0 928 93 0 0 chr17 2706666 2706795 -82731685 + AluY SINE Alu 175 303 -8 2145 109 3 0 chr17 2706873 2707167 -82731313 + AluSx SINE Alu 1 295 -17 2101 116 3 3 chr17 2707507 2707809 -82730671 - AluSp SINE Alu -11 302 1 214 296 167 9 chr17 2708441 2708549 -82729931 + MIR3 SINE MIR 48 172 -36 2045 122 3 3 chr17 2708848 2709156 -82729324 + AluSx SINE Alu 1 308 0 385 363 163 7 chr17 2709214 2709514 -82728966 - L3 LINE CR1 -39 1538 1192 1979 126 20 0 chr17 2709895 2710189 -82728291 + AluSp SINE Alu 1 300 -13 202 189 0 0 chr17 2710464 2710501 -82727979 + (CTGGGG)n Simple_repeat Simple_repeat 1 37 0 2123 119 0 22 chr17 2710884 2711202 -82727278 + AluSq SINE Alu 1 311 -2 530 202 0 29 chr17 2711343 2711447 -82727033 + AluJo SINE Alu 120 220 -92 2053 140 16 0 chr17 2711554 2711861 -82726619 - AluSx SINE Alu 0 312 1 192 291 0 0 chr17 2715027 2715082 -82723398 + MIR SINE MIR 92 146 -62 252 0 0 0 chr17 2715441 2715469 -82723011 + (TG)n Simple_repeat Simple_repeat 2 29 0 1214 109 0 0 chr17 2715469 2715634 -82722846 - AluSg/x SINE Alu -40 272 108 2424 62 7 10 chr17 2716169 2716478 -82722002 + AluSq SINE Alu 3 310 -3 246 32 0 0 chr17 2716478 2716509 -82721971 + (CAG)n Simple_repeat Simple_repeat 2 32 0 237 143 24 0 chr17 2716672 2716714 -82721766 - MER57A LTR ERV1 -66 337 295 658 243 106 23 chr17 2717488 2717706 -82720774 - MIR SINE MIR -19 243 8 234 0 0 0 chr17 2718619 2718645 -82719835 + (TCCA)n Simple_repeat Simple_repeat 1 26 0 584 265 82 0 chr17 2719002 2719172 -82719308 - MIR SINE MIR -22 240 57 377 172 98 163 chr17 2719927 2719991 -82718489 - MER105 DNA DNA -1 203 136 2246 109 0 0 chr17 2719991 2720295 -82718185 - AluSg SINE Alu -6 304 1 377 172 98 163 chr17 2720295 2720445 -82718035 - MER105 DNA DNA -68 136 3 192 345 0 0 chr17 2720734 2720789 -82717691 - MIR SINE MIR -109 153 99 2304 89 0 3 chr17 2720887 2721190 -82717290 - AluSx SINE Alu -10 302 1 2223 84 3 3 chr17 2721280 2721567 -82716913 + AluSq SINE Alu 1 287 -26 22 0 0 0 chr17 2721567 2721589 -82716891 + AT_rich Low_complexity Low_complexity 1 22 0 3148 134 23 44 chr17 2721589 2721943 -82716537 - L1MB3 LINE L1 -7 6176 5837 2038 134 27 0 chr17 2721943 2722242 -82716238 - AluSg SINE Alu -3 307 1 3148 134 23 44 chr17 2722242 2722460 -82716020 - L1MB3 LINE L1 -346 5837 5616 2038 117 0 3 chr17 2722629 2722939 -82715541 + AluSx SINE Alu 1 309 0 1379 177 42 28 chr17 2723929 2724217 -82714263 - AluJo SINE Alu -20 292 1 546 275 35 18 chr17 2724324 2724495 -82713985 - MIR SINE MIR -10 252 79 2347 63 6 19 chr17 2725163 2725480 -82713000 + AluSp SINE Alu 1 313 0 204 346 122 39 chr17 2725727 2725932 -82712548 + MIR SINE MIR 7 228 -34 191 322 132 25 chr17 2726447 2726568 -82711912 - L2 LINE L2 -260 3053 2920 2411 82 0 19 chr17 2726639 2726957 -82711523 + AluSx SINE Alu 1 312 0 503 294 69 20 chr17 2727426 2727549 -82710931 + MIR SINE MIR 49 187 -75 1984 141 0 3 chr17 2727549 2727846 -82710634 + AluSx SINE Alu 1 296 -16 503 294 69 20 chr17 2727846 2727926 -82710554 + MIR SINE MIR 187 262 0 866 255 30 64 chr17 2728211 2728271 -82710209 - MLT1I LTR MaLR -15 394 334 234 0 0 0 chr17 2728271 2728297 -82710183 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 2028 97 0 11 chr17 2728300 2728579 -82709901 - AluSx SINE Alu -31 281 6 866 255 30 64 chr17 2728579 2728812 -82709668 - MLT1I LTR MaLR -77 332 107 2163 103 14 0 chr17 2729388 2729680 -82708800 + AluSx SINE Alu 1 296 -16 2392 183 106 111 chr17 2729682 2729861 -82708619 - MER44D DNA MER2_type -1882 605 427 2243 111 0 0 chr17 2729861 2730159 -82708321 - AluSx SINE Alu -14 298 1 2392 183 106 111 chr17 2730159 2730255 -82708225 - MER44D DNA MER2_type -2060 427 332 2114 127 13 0 chr17 2730255 2730562 -82707918 + AluSx SINE Alu 1 311 -1 2392 183 106 111 chr17 2730562 2731022 -82707458 - MER44D DNA MER2_type -2155 332 1 2126 103 21 0 chr17 2731218 2731509 -82706971 - AluSx SINE Alu -15 297 1 252 0 0 0 chr17 2731646 2731674 -82706806 + (GA)n Simple_repeat Simple_repeat 1 28 0 2338 89 0 0 chr17 2733610 2733913 -82704567 + AluSq SINE Alu 1 303 -10 1955 138 20 13 chr17 2734122 2734427 -82704053 - AluSx SINE Alu -5 307 1 2081 128 3 0 chr17 2734468 2734766 -82703714 + AluSx SINE Alu 1 299 -13 416 302 16 1 chr17 2734874 2735007 -82703473 - MER5B DNA MER1_type -40 149 1 253 316 158 38 chr17 2735033 2735075 -82703405 - MER5A DNA MER1_type -1 188 152 2383 74 0 0 chr17 2735075 2735372 -82703108 - AluSg SINE Alu -13 297 1 253 316 158 38 chr17 2735372 2735487 -82702993 - MER5A DNA MER1_type -37 152 12 566 236 52 40 chr17 2735507 2735681 -82702799 + MER5B DNA MER1_type 1 176 -2 1944 96 0 0 chr17 2735742 2735991 -82702489 - AluSx SINE Alu -63 249 1 848 158 0 15 chr17 2736048 2736181 -82702299 - FLAM_A SINE Alu -2 131 1 243 310 100 0 chr17 2736437 2736537 -82701943 - MIR SINE MIR -73 135 26 2267 70 0 3 chr17 2736565 2736877 -82701603 + AluY SINE Alu 1 311 0 2433 83 0 0 chr17 2736888 2737200 -82701280 + AluSx SINE Alu 1 312 0 2285 97 0 0 chr17 2738174 2738473 -82700007 - AluSg1 SINE Alu -10 299 1 1511 196 72 19 chr17 2738473 2738954 -82699526 + MLT1F LTR MaLR 35 542 0 2116 117 3 3 chr17 2739049 2739358 -82699122 - AluSg SINE Alu -1 309 1 1096 82 0 0 chr17 2739358 2739493 -82698987 - AluSq/x SINE Alu -178 135 1 358 223 71 9 chr17 2739644 2739756 -82698724 + MER57-int LTR ERV1 127 245 -7292 516 86 26 192 chr17 2740145 2740296 -82698184 + MER57-int LTR ERV1 1177 1302 -3569 367 228 70 70 chr17 2740296 2740423 -82698057 + MER93b LTR ERV1 199 328 -45 2198 109 0 3 chr17 2740423 2740726 -82697754 - AluSg1 SINE Alu -7 302 1 367 228 70 70 chr17 2740726 2740756 -82697724 + MER93b LTR ERV1 327 356 -17 1230 156 7 48 chr17 2740786 2740821 -82697659 - L1M4 LINE L1 -391 5793 5758 2338 82 0 3 chr17 2740821 2741115 -82697365 + AluSc SINE Alu 1 293 -16 1230 156 7 48 chr17 2741115 2741348 -82697132 - L1M4 LINE L1 -426 5758 5536 2168 101 0 3 chr17 2741776 2742072 -82696408 + AluSc SINE Alu 1 295 -14 1179 181 23 30 chr17 2742254 2742520 -82695960 + MER58B DNA MER1_type 78 341 0 2338 73 0 20 chr17 2742586 2742889 -82695591 - AluY SINE Alu -14 297 1 2331 68 3 0 chr17 2742890 2743182 -82695298 - AluSg1 SINE Alu -16 293 1 773 163 6 17 chr17 2743796 2743968 -82694512 + CT-rich Low_complexity Low_complexity 2 171 0 2302 106 0 0 chr17 2743968 2744280 -82694200 - AluSx SINE Alu 0 312 1 1109 159 17 0 chr17 2744282 2744458 -82694022 - AluJb SINE Alu -16 296 118 2446 70 0 3 chr17 2745024 2745336 -82693144 - AluSx SINE Alu -1 311 1 221 270 0 40 chr17 2746122 2746196 -82692284 + MIR SINE MIR 85 155 -107 256 315 9 28 chr17 2746690 2746798 -82691682 + MIR SINE MIR 31 136 -126 1953 133 0 3 chr17 2746971 2747286 -82691194 - AluSx SINE Alu 0 314 1 2193 245 45 13 chr17 2747556 2748094 -82690386 + MLT1H1 LTR MaLR 1 555 0 2287 98 0 0 chr17 2748102 2748408 -82690072 + AluSx SINE Alu 1 306 -6 541 298 55 36 chr17 2748411 2748740 -82689740 - HAL1 LINE L1 -963 1544 1210 2208 82 0 23 chr17 2748768 2749071 -82689409 + AluY SINE Alu 4 299 -12 1084 140 0 28 chr17 2749071 2749249 -82689231 + AluSq SINE Alu 135 307 -6 509 283 69 24 chr17 2749251 2749579 -82688901 - L1M4 LINE L1 -656 5522 5182 263 206 27 0 chr17 2750564 2750637 -82687843 + L1MC5 LINE L1 7832 7906 -55 2385 84 0 0 chr17 2750652 2750950 -82687530 - AluSg SINE Alu -12 298 1 1830 166 0 13 chr17 2750974 2751282 -82687198 - AluJo SINE Alu -8 304 1 227 324 152 0 chr17 2751294 2751399 -82687081 - L3 LINE CR1 -118 1459 1339 465 332 76 5 chr17 2751433 2751644 -82686836 + MIR SINE MIR 18 243 -19 2311 93 10 0 chr17 2751778 2752079 -82686401 + AluSq SINE Alu 1 304 -9 2169 85 0 20 chr17 2752905 2753200 -82685280 + AluSx SINE Alu 1 289 -23 850 189 148 71 chr17 2753722 2753845 -82684635 + MER33 DNA MER1_type 4 116 -2469 2306 103 3 0 chr17 2753845 2754156 -82684324 - AluSx SINE Alu 0 312 1 850 189 148 71 chr17 2754156 2754299 -82684181 + MER33 DNA MER1_type 116 298 -2287 2246 79 7 0 chr17 2754299 2754589 -82683891 - AluSc SINE Alu -17 292 1 850 189 148 71 chr17 2754589 2754618 -82683862 + MER33 DNA MER1_type 298 323 -1 504 204 11 0 chr17 2754636 2754729 -82683751 + AluJ/FLAM SINE Alu 1 94 -218 258 195 0 91 chr17 2755060 2755137 -82683343 - MIR3 SINE MIR -38 170 101 2394 78 0 7 chr17 2755306 2755614 -82682866 - AluSx SINE Alu -6 306 1 1112 182 47 23 chr17 2755632 2755846 -82682634 + MER20 DNA MER1_type 1 219 0 5228 21 0 0 chr17 2756040 2756614 -82681866 + SVA Other Other 809 1382 -4 2196 111 0 7 chr17 2756622 2756929 -82681551 + AluSx SINE Alu 2 306 -6 2011 116 0 0 chr17 2757222 2757497 -82680983 + AluSx SINE Alu 1 275 -37 739 47 0 19 chr17 2757508 2757614 -82680866 + (GGAA)n Simple_repeat Simple_repeat 4 107 0 2307 33 0 0 chr17 2757614 2757887 -82680593 - AluY SINE Alu -38 273 1 299 171 198 36 chr17 2759702 2759813 -82678667 - MER106A DNA MER1_type -56 180 52 2369 60 0 10 chr17 2759817 2760118 -82678362 - AluSx SINE Alu -14 298 1 2262 104 0 0 chr17 2760578 2760876 -82677604 - AluSq SINE Alu -15 298 1 2211 102 0 0 chr17 2761727 2762021 -82676459 + AluSx SINE Alu 4 297 -15 22 56 0 0 chr17 2762021 2762057 -82676423 + AT_rich Low_complexity Low_complexity 1 36 0 1767 164 0 23 chr17 2762961 2763265 -82675215 + AluJo SINE Alu 6 302 -10 243 324 29 19 chr17 2763502 2763607 -82674873 + MARNA DNA Mariner 62 167 -419 2287 100 0 3 chr17 2763713 2764023 -82674457 - AluSg SINE Alu -1 309 1 630 174 0 0 chr17 2764374 2764512 -82673968 + (TG)n Simple_repeat Simple_repeat 1 138 0 307 283 19 9 chr17 2764580 2764686 -82673794 - MIR SINE MIR -43 165 59 2243 98 3 3 chr17 2764752 2765057 -82673423 + AluSx SINE Alu 1 305 -7 497 264 71 13 chr17 2765224 2765379 -82673101 + MIR SINE MIR 2 165 -97 2317 81 0 0 chr17 2765379 2765675 -82672805 + AluY SINE Alu 1 296 -15 1172 170 0 77 chr17 2765793 2765921 -82672559 + AluJb SINE Alu 1 101 -211 2070 104 14 7 chr17 2765921 2766209 -82672271 - AluSx SINE Alu -22 290 1 1172 170 0 77 chr17 2766209 2766339 -82672141 + AluJb SINE Alu 101 239 -73 714 258 57 0 chr17 2766480 2766674 -82671806 - MIR SINE MIR 0 262 58 2289 103 0 0 chr17 2766795 2767106 -82671374 - AluY SINE Alu 0 311 1 917 135 0 0 chr17 2767110 2767243 -82671237 - AluSq/x SINE Alu -180 133 1 2228 119 0 0 chr17 2767920 2768222 -82670258 + AluSx SINE Alu 1 302 -10 2099 115 10 7 chr17 2768625 2768929 -82669551 - AluSc SINE Alu -4 305 1 790 176 0 47 chr17 2768931 2769079 -82669401 - FLAM_C SINE Alu -2 141 1 2131 109 0 10 chr17 2771512 2771814 -82666666 + AluSx SINE Alu 3 301 -11 263 284 226 0 chr17 2771878 2771980 -82666500 + MER5A DNA MER1_type 59 183 -6 912 131 25 175 chr17 2772201 2772321 -82666159 + L1MA9 LINE L1 6036 6125 -187 229 175 0 0 chr17 2772321 2772361 -82666119 + Alu SINE Alu 135 174 -134 912 131 25 175 chr17 2772361 2772521 -82665959 + L1MA9 LINE L1 6125 6307 -5 971 211 11 0 chr17 2772665 2772850 -82665630 + AluJo SINE Alu 121 307 -5 2221 110 3 0 chr17 2773136 2773445 -82665035 - AluSx SINE Alu -2 310 1 2065 107 14 0 chr17 2773454 2773734 -82664746 - AluSx SINE Alu -28 284 1 399 287 100 10 chr17 2773781 2774017 -82664463 + L1ME3A LINE L1 5907 6162 0 2377 87 0 6 chr17 2774033 2774345 -82664135 + AluSx SINE Alu 1 310 -2 371 301 32 75 chr17 2774526 2774657 -82663823 + MIR SINE MIR 84 206 -56 2147 125 0 0 chr17 2774657 2774953 -82663527 + AluSq SINE Alu 1 296 -17 371 301 32 75 chr17 2774953 2775007 -82663473 + MIR SINE MIR 206 261 -1 847 82 16 16 chr17 2775343 2775465 -82663015 + FRAM SINE Alu 18 139 -37 2066 105 3 3 chr17 2775477 2775763 -82662717 + AluSx SINE Alu 1 286 -26 2231 108 0 0 chr17 2775943 2776239 -82662241 + AluSp SINE Alu 3 298 -15 476 286 71 18 chr17 2776495 2776663 -82661817 - MIR SINE MIR -23 239 63 2306 87 0 22 chr17 2776740 2777052 -82661428 + AluSx SINE Alu 1 305 -7 791 105 0 0 chr17 2777062 2777167 -82661313 + FLAM_C SINE Alu 1 105 -38 364 267 25 25 chr17 2778430 2778591 -82659889 + C-rich Low_complexity Low_complexity 5 165 0 310 298 17 44 chr17 2778613 2778794 -82659686 + C-rich Low_complexity Low_complexity 5 180 0 220 271 17 0 chr17 2779427 2779486 -82658994 + GA-rich Low_complexity Low_complexity 4 63 0 308 296 65 0 chr17 2781695 2781803 -82656677 - MIR SINE MIR -113 149 35 2264 101 0 0 chr17 2784380 2784677 -82653803 + AluSq SINE Alu 1 297 -16 240 35 0 0 chr17 2788095 2788124 -82650356 + (A)n Simple_repeat Simple_repeat 1 29 0 2371 67 10 0 chr17 2789416 2789716 -82648764 + AluSx SINE Alu 1 303 -9 653 257 48 62 chr17 2792207 2792239 -82646241 - MIR SINE MIR 0 262 231 2242 97 0 19 chr17 2792239 2792549 -82645931 + AluSx SINE Alu 1 304 -8 653 257 48 62 chr17 2792549 2792745 -82645735 - MIR SINE MIR -31 231 38 2116 99 7 20 chr17 2792938 2793240 -82645240 + AluSx SINE Alu 1 298 -14 2370 73 3 0 chr17 2793353 2793653 -82644827 + AluSp SINE Alu 1 301 -12 1525 157 52 28 chr17 2793704 2793990 -82644490 + AluJb SINE Alu 3 295 -17 278 343 72 12 chr17 2794128 2794294 -82644186 - L2 LINE L2 -214 3058 2883 507 155 10 62 chr17 2794331 2794428 -82644052 + FRAM SINE Alu 4 95 -81 282 247 62 0 chr17 2794888 2794969 -82643511 - L1ME LINE L1 -343 5778 5693 2170 110 0 25 chr17 2795253 2795571 -82642909 + AluSg SINE Alu 1 310 0 255 313 115 0 chr17 2796230 2796326 -82642154 - MIR3 SINE MIR -11 197 91 2313 50 9 40 chr17 2796381 2796702 -82641778 + AluY SINE Alu 1 311 0 708 335 80 15 chr17 2797042 2797379 -82641101 + L2 LINE L2 2914 3272 0 2172 95 3 3 chr17 2797398 2797694 -82640786 - AluSx SINE Alu -16 296 1 2243 88 7 3 chr17 2797909 2798205 -82640275 - AluSg SINE Alu -13 297 1 257 272 237 18 chr17 2798987 2799101 -82639379 - MER5A DNA MER1_type 0 189 51 2247 102 0 0 chr17 2799134 2799437 -82639043 + AluSx SINE Alu 1 303 -9 759 266 58 0 chr17 2801485 2801673 -82636807 + MIR SINE MIR 43 241 -21 251 318 24 56 chr17 2803902 2804028 -82634452 - MIR3 SINE MIR 0 208 87 367 288 52 38 chr17 2804390 2804584 -82633896 - MIR SINE MIR -51 211 18 244 338 176 7 chr17 2804611 2804747 -82633733 - L2 LINE L2 -2 3270 3112 2372 89 0 3 chr17 2805112 2805425 -82633055 + AluSq SINE Alu 2 313 0 2359 76 10 0 chr17 2805819 2806122 -82632358 + AluSx SINE Alu 1 306 -6 405 176 14 0 chr17 2806616 2806690 -82631790 + MER20 DNA MER1_type 73 147 -72 1822 147 7 3 chr17 2806690 2806976 -82631504 + AluJo SINE Alu 1 287 -25 2239 98 3 3 chr17 2807195 2807501 -82630979 - AluSp SINE Alu -7 306 1 657 209 0 0 chr17 2810750 2810903 -82627577 + (CA)n Simple_repeat Simple_repeat 1 153 0 1946 71 61 46 chr17 2812958 2813261 -82625219 + AluY SINE Alu 1 307 0 190 259 306 0 chr17 2813316 2813401 -82625079 + MIR SINE MIR 69 179 -83 394 130 0 0 chr17 2813402 2813471 -82625009 + L1MC4 LINE L1 7475 7543 -499 1722 162 47 0 chr17 2813478 2813775 -82624705 + AluJb SINE Alu 1 311 -1 1704 179 12 66 chr17 2813794 2814373 -82624107 + L1MB5 LINE L1 5099 5659 -525 2113 113 0 19 chr17 2814373 2814692 -82623788 + AluSq SINE Alu 1 313 0 1704 179 12 66 chr17 2814692 2814743 -82623737 + L1MB5 LINE L1 5659 5711 -473 285 109 31 47 chr17 2814744 2814808 -82623672 - AluSq SINE Alu -1 301 239 1153 144 0 28 chr17 2814808 2814988 -82623492 - AluSq SINE Alu -137 176 2 1076 186 4 30 chr17 2814991 2815227 -82623253 + L1MB5 LINE L1 5730 5959 -215 1480 81 5 10 chr17 2815227 2815425 -82623055 - AluSx SINE Alu -115 197 1 557 196 22 22 chr17 2815480 2815618 -82622862 + MLT1B LTR MaLR 205 342 -48 22 35 0 0 chr17 2817068 2817097 -82621383 + GC_rich Low_complexity Low_complexity 1 29 0 219 69 0 0 chr17 2817180 2817209 -82621271 + (TCC)n Simple_repeat Simple_repeat 1 29 0 2238 60 50 10 chr17 2817359 2817659 -82620821 - AluSx SINE Alu 0 312 1 329 330 54 0 chr17 2818513 2818625 -82619855 - MER5A DNA MER1_type -9 180 63 471 337 125 24 chr17 2818651 2818948 -82619532 + L2 LINE L2 2986 3312 -1 1290 179 0 48 chr17 2819843 2819968 -82618512 + AluJo SINE Alu 1 130 -182 480 18 0 0 chr17 2819968 2820025 -82618455 + (CA)n Simple_repeat Simple_repeat 2 58 0 1290 179 0 48 chr17 2820025 2820043 -82618437 + AluJo SINE Alu 130 147 -165 1816 139 17 10 chr17 2820043 2820331 -82618149 + AluJo SINE Alu 1 290 -22 1290 179 0 48 chr17 2820331 2820437 -82618043 + AluJo SINE Alu 147 239 -73 2036 119 0 0 chr17 2820455 2820879 -82617601 + AluSg SINE Alu 2 425 0 261 263 105 26 chr17 2820885 2820999 -82617481 - MER112 DNA MER1_type -136 124 2 2270 91 0 0 chr17 2821150 2821446 -82617034 + AluSg SINE Alu 1 296 -14 1535 181 24 0 chr17 2821518 2821811 -82616669 + MSTB LTR MaLR 1 300 -126 1329 101 105 5 chr17 2822035 2822244 -82616236 - MER30 DNA MER1_type 0 230 1 2276 96 3 6 chr17 2822309 2822621 -82615859 + AluSp SINE Alu 3 313 0 1892 96 0 76 chr17 2822650 2822951 -82615529 - AluSx SINE Alu -4 308 31 4392 89 189 23 chr17 2822951 2823659 -82614821 + LTR12 LTR ERV1 1 826 0 1558 165 9 71 chr17 2824084 2824406 -82614074 + AluJo SINE Alu 1 302 -10 2398 76 0 13 chr17 2824680 2824997 -82613483 + AluSp SINE Alu 1 313 0 2197 109 3 3 chr17 2825590 2825894 -82612586 + AluSp SINE Alu 1 304 -9 1708 168 0 26 chr17 2826666 2826826 -82611654 - AluJb SINE Alu -17 295 145 2140 110 3 3 chr17 2826826 2827118 -82611362 - AluSc SINE Alu -17 292 1 1708 168 0 26 chr17 2827118 2827260 -82611220 - AluJb SINE Alu -167 145 1 1800 85 0 0 chr17 2827536 2827771 -82610709 - AluSc SINE Alu -70 239 5 651 236 109 0 chr17 2827771 2828000 -82610480 + Charlie4a DNA MER1_type 159 412 -96 2534 56 0 0 chr17 2828642 2828944 -82609536 + AluY SINE Alu 1 302 -9 2007 100 0 0 chr17 2829810 2830081 -82608399 - AluSx SINE Alu -8 304 34 553 175 133 33 chr17 2830365 2830485 -82607995 + FLAM_A SINE Alu 1 132 -1 2079 85 14 11 chr17 2830492 2830810 -82607670 + AluSg SINE Alu 1 319 0 2097 123 0 0 chr17 2831007 2831300 -82607180 + AluSx SINE Alu 1 293 -19 22 0 0 0 chr17 2831300 2831322 -82607158 + AT_rich Low_complexity Low_complexity 1 22 0 2064 137 7 0 chr17 2831508 2831814 -82606666 + AluSx SINE Alu 1 308 -4 1093 104 0 31 chr17 2832230 2832252 -82606228 - AluSg/x SINE Alu -8 304 283 2287 83 6 6 chr17 2832252 2832564 -82605916 - AluSx SINE Alu 0 312 1 201 39 0 0 chr17 2832567 2832593 -82605887 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1093 104 0 31 chr17 2832593 2832729 -82605751 - AluSg/x SINE Alu -31 281 147 768 333 91 52 chr17 2833412 2833537 -82604943 + L1M4 LINE L1 4156 4275 -1871 2191 71 14 10 chr17 2833537 2833831 -82604649 + AluSx SINE Alu 1 295 -17 768 333 91 52 chr17 2833831 2833958 -82604522 + L1M4 LINE L1 4275 4396 -1750 1572 171 34 13 chr17 2833958 2834256 -82604224 + AluJo SINE Alu 1 304 -8 768 333 91 52 chr17 2834256 2834346 -82604134 + L1M4 LINE L1 4396 4481 -1665 2308 103 3 0 chr17 2834346 2834657 -82603823 + AluSp SINE Alu 2 313 0 768 333 91 52 chr17 2834657 2834815 -82603665 + L1M4 LINE L1 4481 4631 -1515 2331 72 0 0 chr17 2834815 2835106 -82603374 - AluY SINE Alu -20 291 1 2402 77 0 0 chr17 2835108 2835405 -82603075 - AluSc SINE Alu -12 297 1 768 333 91 52 chr17 2835405 2835480 -82603000 + L1M4 LINE L1 4631 4760 -1386 1397 178 15 41 chr17 2836464 2836754 -82601726 + AluJo SINE Alu 15 278 -34 2111 85 0 51 chr17 2836754 2837070 -82601410 + AluSg SINE Alu 1 300 -10 268 320 13 0 chr17 2838518 2838593 -82599887 + L3 LINE CR1 1481 1556 -21 474 310 58 65 chr17 2839025 2839286 -82599194 + MLT1L LTR MaLR 136 394 -221 2134 117 0 13 chr17 2839824 2840140 -82598340 + AluSx SINE Alu 1 312 0 1949 116 7 3 chr17 2840590 2840901 -82597579 - AluSx SINE Alu 0 312 1 2204 103 0 3 chr17 2841455 2841756 -82596724 - AluSx SINE Alu -12 300 1 1972 145 0 0 chr17 2841812 2842102 -82596378 - AluJb SINE Alu -22 290 1 2005 135 0 19 chr17 2842134 2842445 -82596035 - AluJo SINE Alu -3 309 5 225 265 0 0 chr17 2842585 2842634 -82595846 - L2 LINE L2 -243 3070 3022 1015 106 0 0 chr17 2842635 2842767 -82595713 + AluSq/x SINE Alu 1 132 -181 2128 62 47 0 chr17 2842769 2843065 -82595415 + AluSp SINE Alu 1 309 0 2436 65 3 0 chr17 2843071 2843379 -82595101 + AluSx SINE Alu 1 309 -3 993 298 51 72 chr17 2843397 2844149 -82594331 - L2 LINE L2 -312 3001 2266 853 102 0 8 chr17 2847418 2847536 -82590944 + FLAM_A SINE Alu 1 117 -16 2127 90 0 29 chr17 2847590 2847901 -82590579 - AluSg SINE Alu -8 302 1 2451 65 0 0 chr17 2848262 2848570 -82589910 - AluY SINE Alu -3 308 1 861 226 6 0 chr17 2849076 2849235 -82589245 - AluJb SINE Alu -13 299 140 2325 94 3 0 chr17 2849240 2849548 -82588932 - AluSx SINE Alu -3 309 1 2172 98 0 25 chr17 2849625 2849941 -82588539 + AluSx SINE Alu 1 308 -4 2053 96 0 0 chr17 2850499 2850770 -82587710 - AluSx SINE Alu -41 271 1 1437 109 28 0 chr17 2850771 2850982 -82587498 - L1PA10 LINE L1 -13 6155 5939 2162 75 4 0 chr17 2851049 2851380 -82587100 + AluSg1 SINE Alu 1 332 0 871 187 79 30 chr17 2851455 2851658 -82586822 - MER20 DNA MER1_type -1 218 6 2490 77 0 0 chr17 2852238 2852548 -82585932 - AluSx SINE Alu -2 310 1 2188 108 0 10 chr17 2852697 2853003 -82585477 + AluSx SINE Alu 1 303 -9 257 304 104 112 chr17 2853446 2853706 -82584774 - L2 LINE L2 -8 3264 3007 572 187 18 160 chr17 2853770 2853879 -82584601 - MER105 DNA DNA -13 191 68 2236 103 3 3 chr17 2853879 2854191 -82584289 - AluSq SINE Alu -1 312 1 572 187 18 160 chr17 2854191 2854222 -82584258 - MER105 DNA DNA -136 68 34 2112 193 159 48 chr17 2854222 2854321 -82584159 - LTR65 LTR ERV1 0 669 582 2160 86 4 0 chr17 2854321 2854623 -82583857 - AluSx SINE Alu 0 307 5 2112 193 159 48 chr17 2854623 2854972 -82583508 - LTR65 LTR ERV1 -87 582 134 2410 59 0 10 chr17 2854972 2855279 -82583201 - AluY SINE Alu -7 304 1 2112 193 159 48 chr17 2855279 2855430 -82583050 - LTR65 LTR ERV1 -535 134 1 572 187 18 160 chr17 2855430 2855507 -82582973 - MER105 DNA DNA -170 34 4 1492 123 11 84 chr17 2855929 2856069 -82582411 - AluJb SINE Alu -49 263 153 2360 76 3 0 chr17 2856069 2856373 -82582107 - AluSp SINE Alu -8 305 1 1492 123 11 84 chr17 2856373 2856516 -82581964 - AluJb SINE Alu -159 153 1 460 248 142 0 chr17 2856648 2856789 -82581691 - MIR SINE MIR -1 261 101 2021 101 4 0 chr17 2856789 2857067 -82581413 + AluSx SINE Alu 22 300 -12 1046 127 7 0 chr17 2857067 2857240 -82581240 + AluSq SINE Alu 134 307 0 270 333 51 0 chr17 2857581 2857698 -82580782 + L3 LINE CR1 1308 1430 -147 392 21 0 0 chr17 2857699 2857747 -82580733 - AluY SINE Alu -254 48 1 206 305 107 98 chr17 2857809 2857918 -82580562 - L2 LINE L2 -636 2678 2572 2176 117 3 0 chr17 2857918 2858227 -82580253 + AluSx SINE Alu 1 310 -2 206 305 107 98 chr17 2858227 2858537 -82579943 - L2 LINE L2 -742 2572 2255 2096 84 0 0 chr17 2859100 2859375 -82579105 - AluSg SINE Alu -35 275 1 843 246 72 0 chr17 2859448 2859643 -82578837 + MER3 DNA MER1_type 1 209 0 664 277 179 14 chr17 2859798 2860338 -82578142 + L2 LINE L2 2667 3313 0 2159 117 3 0 chr17 2861273 2861582 -82576898 - AluSx SINE Alu -2 310 1 2495 29 3 32 chr17 2861977 2862292 -82576188 - AluY SINE Alu -5 306 1 2251 148 41 35 chr17 2862595 2862700 -82575780 + L1MC4 LINE L1 7378 7481 -561 2239 97 3 0 chr17 2862700 2862998 -82575482 + AluSq SINE Alu 1 299 -14 2251 148 41 35 chr17 2862998 2863353 -82575127 + L1MC4 LINE L1 7481 7841 -201 1236 121 0 0 chr17 2863361 2863534 -82574946 - AluSg/x SINE Alu -14 298 126 2092 109 0 34 chr17 2863534 2863856 -82574624 - AluSx SINE Alu -1 311 1 193 264 58 58 chr17 2864230 2864317 -82574163 + MIR3 SINE MIR 107 193 -15 2492 74 0 0 chr17 2864596 2864907 -82573573 - AluSx SINE Alu -1 311 1 803 222 0 30 chr17 2864909 2865076 -82573404 - FRAM SINE Alu 0 166 5 2182 103 6 13 chr17 2865342 2865653 -82572827 - AluSx SINE Alu -3 309 1 2192 102 0 0 chr17 2866243 2866546 -82571934 - AluSq SINE Alu -10 303 1 210 330 52 0 chr17 2867188 2867303 -82571177 - MIR3 SINE MIR -7 201 81 2262 83 6 10 chr17 2867350 2867662 -82570818 - AluY SINE Alu 0 311 1 1143 38 0 0 chr17 2867664 2867795 -82570685 - AluY SINE Alu -180 131 1 2218 70 27 10 chr17 2868214 2868513 -82569967 - AluY SINE Alu -7 304 1 978 267 180 46 chr17 2869026 2869209 -82569271 - L2 LINE L2 -1 3312 3155 2119 94 3 3 chr17 2869209 2869508 -82568972 + AluSx SINE Alu 1 299 -13 978 267 180 46 chr17 2869508 2870157 -82568323 - L2 LINE L2 -158 3155 2311 2409 50 7 0 chr17 2870157 2870455 -82568025 - AluY SINE Alu -10 301 2 978 267 180 46 chr17 2870455 2870614 -82567866 - L2 LINE L2 -1002 2311 2175 2214 112 0 0 chr17 2870640 2870944 -82567536 + AluSg SINE Alu 1 304 -6 543 307 146 0 chr17 2870963 2871155 -82567325 - MIR SINE MIR -35 227 8 192 284 69 35 chr17 2871514 2871630 -82566850 - L2 LINE L2 -210 3062 2943 389 278 26 57 chr17 2873148 2873327 -82565153 + MIR SINE MIR 14 192 -61 2062 126 17 0 chr17 2873378 2873672 -82564808 + AluSx SINE Alu 1 299 -13 2137 111 7 0 chr17 2873673 2873979 -82564501 + AluSp SINE Alu 2 309 -4 195 231 102 37 chr17 2874560 2874668 -82563812 + MIR3 SINE MIR 40 154 -54 1743 117 53 0 chr17 2875169 2875457 -82563023 - AluSx SINE Alu 0 307 6 303 187 0 133 chr17 2875754 2875957 -82562523 + C-rich Low_complexity Low_complexity 4 179 0 565 113 0 0 chr17 2876507 2876587 -82561893 + AluSg/x SINE Alu 217 296 -14 264 211 253 0 chr17 2876919 2877014 -82561466 + MIR SINE MIR 21 139 -69 223 359 18 41 chr17 2877074 2877129 -82561351 - MIR3 SINE MIR -2 206 151 1749 152 13 32 chr17 2877129 2877306 -82561174 - AluSx SINE Alu -2 310 140 2099 118 0 10 chr17 2877306 2877610 -82560870 - AluSx SINE Alu -11 301 1 1749 152 13 32 chr17 2877610 2877748 -82560732 - AluSx SINE Alu -172 140 1 223 359 18 41 chr17 2877748 2877862 -82560618 - MIR3 SINE MIR -57 151 41 307 226 65 123 chr17 2878076 2878385 -82560095 + L2 LINE L2 2747 3052 -220 201 258 72 41 chr17 2878881 2878978 -82559502 - MIR SINE MIR -87 121 22 556 232 14 162 chr17 2879043 2879149 -82559331 - MIR SINE MIR 0 262 142 1105 148 0 0 chr17 2879149 2879311 -82559169 - FRAM SINE Alu 0 166 5 556 232 14 162 chr17 2879311 2879343 -82559137 - MIR SINE MIR -120 142 107 2115 112 3 16 chr17 2879343 2879657 -82558823 - AluSx SINE Alu -2 310 1 556 232 14 162 chr17 2879657 2879749 -82558731 - MIR SINE MIR -155 107 78 2452 62 3 0 chr17 2879749 2880053 -82558427 + AluY SINE Alu 1 305 -6 556 232 14 162 chr17 2880053 2880104 -82558376 - MIR SINE MIR -184 78 21 567 254 125 19 chr17 2880693 2881048 -82557432 + MLT1H1 LTR MaLR 86 547 -8 2171 117 3 3 chr17 2881335 2881644 -82556836 - AluSx SINE Alu -3 309 1 266 208 20 89 chr17 2881707 2881808 -82556672 + MIR3 SINE MIR 81 174 -34 336 111 0 0 chr17 2881922 2881976 -82556504 + (TCC)n Simple_repeat Simple_repeat 1 54 0 2387 68 3 10 chr17 2883494 2883802 -82554678 - AluY SINE Alu -4 307 2 1993 134 7 0 chr17 2883806 2884097 -82554383 - AluSx SINE Alu -19 293 1 288 0 0 0 chr17 2884211 2884243 -82554237 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 236 310 0 0 chr17 2884249 2884307 -82554173 - L2 LINE L2 -19 3294 3237 2147 92 0 0 chr17 2885319 2885622 -82552858 + AluSx SINE Alu 1 303 0 195 281 24 85 chr17 2885753 2885835 -82552645 + L3 LINE CR1 1377 1453 -124 2557 43 0 0 chr17 2885972 2886275 -82552205 + AluY SINE Alu 1 303 -8 482 288 179 11 chr17 2886455 2886823 -82551657 + L2 LINE L2 1818 2247 -1067 1256 119 0 21 chr17 2886825 2887019 -82551461 + MLT1D LTR MaLR 1 190 -315 1195 45 0 0 chr17 2887028 2887182 -82551298 + GSAT Satellite centromeric 32 185 -32 385 150 0 0 chr17 2887177 2887237 -82551243 + MLT1D LTR MaLR 154 213 -292 * 1240 130 0 0 chr17 3087244 3087429 -82351051 - AluSq SINE Alu -128 185 1 354 293 8 0 chr17 3087467 3087600 -82350880 - L1M4 LINE L1 -3594 2552 2419 2185 94 3 10 chr17 3087963 3088271 -82350209 + AluSx SINE Alu 1 306 -6 1804 111 36 33 chr17 3088751 3089057 -82349423 + AluSx SINE Alu 5 311 -1 1684 155 0 20 chr17 3089407 3089704 -82348776 + AluJb SINE Alu 13 303 -9 765 81 0 10 chr17 3089706 3089805 -82348675 + AluSp SINE Alu 38 135 -178 2142 65 0 77 chr17 3089805 3089942 -82348538 + AluSp SINE Alu 1 147 -166 2209 79 26 3 chr17 3089942 3090245 -82348235 + AluY SINE Alu 1 310 -1 2142 65 0 77 chr17 3090245 3090431 -82348049 + AluSp SINE Alu 147 299 -14 234 322 44 22 chr17 3090494 3090584 -82347896 + L1MC/D LINE L1 5498 5589 -2219 442 246 34 114 chr17 3090599 3090778 -82347702 - L1MC5 LINE L1 -37 7924 7767 1984 116 0 28 chr17 3090778 3091097 -82347383 + AluSx SINE Alu 2 311 -1 442 246 34 114 chr17 3091097 3091153 -82347327 - L1MC5 LINE L1 -194 7767 7708 906 219 45 20 chr17 3091170 3091416 -82347064 - L1ME2 LINE L1 -10 6154 5903 561 346 29 8 chr17 3091426 3091669 -82346811 - L1MEc LINE L1 -6098 298 51 381 193 67 44 chr17 3091672 3091807 -82346673 + L1MC4 LINE L1 6972 7109 -933 1931 117 0 47 chr17 3091839 3092156 -82346324 - AluSx SINE Alu -10 302 1 710 213 36 38 chr17 3092163 3092394 -82346086 - L1ME2 LINE L1 -310 5854 5648 190 265 41 0 chr17 3092405 3092454 -82346026 - L2 LINE L2 -74 3198 3148 181 237 0 0 chr17 3092692 3092730 -82345750 + MIR SINE MIR 117 154 -108 2440 40 0 7 chr17 3093198 3093502 -82344978 + AluY SINE Alu 1 302 -9 269 129 71 14 chr17 3093528 3093598 -82344882 - L1ME4a LINE L1 -1 6120 6047 1432 151 12 15 chr17 3093601 3093860 -82344620 + AluJb SINE Alu 1 258 -54 439 282 59 86 chr17 3093898 3094104 -82344376 + MIR SINE MIR 9 208 -54 2461 63 0 0 chr17 3094104 3094406 -82344074 + AluSx SINE Alu 2 303 -9 439 282 59 86 chr17 3094406 3094454 -82344026 + MIR SINE MIR 208 256 -6 411 309 117 19 chr17 3094464 3094692 -82343788 + L1ME LINE L1 5440 5719 -443 2078 98 0 35 chr17 3094692 3095008 -82343472 + AluSx SINE Alu 2 306 -6 411 309 117 19 chr17 3095008 3095112 -82343368 + L1ME LINE L1 5719 5811 -351 1473 163 6 68 chr17 3095228 3095553 -82342927 + AluJb SINE Alu 5 309 -3 2145 103 0 25 chr17 3095685 3096005 -82342475 - AluSx SINE Alu 0 312 1 3597 206 32 43 chr17 3096537 3096998 -82341482 + MER21B LTR ERV1 13 463 -400 2072 92 24 3 chr17 3096998 3097290 -82341190 - AluSg SINE Alu -12 298 1 3597 206 32 43 chr17 3097290 3097639 -82340841 + MER21B LTR ERV1 463 814 -49 2254 81 7 0 chr17 3097737 3098032 -82340448 + AluSx SINE Alu 2 298 -14 261 0 0 0 chr17 3098072 3098101 -82340379 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 313 298 98 74 chr17 3098106 3098485 -82339995 - L2 LINE L2 -36 3236 2849 2313 77 13 10 chr17 3098663 3098973 -82339507 + AluSq SINE Alu 1 311 -2 839 256 98 94 chr17 3098973 3099492 -82338988 - L1ME3A LINE L1 -41 6129 5609 2221 102 0 31 chr17 3100070 3100392 -82338088 + AluSx SINE Alu 1 312 0 2064 114 0 29 chr17 3100507 3100822 -82337658 + AluSx SINE Alu 1 306 -6 243 260 50 70 chr17 3101023 3101123 -82337357 - MER91C DNA MER1_type -39 101 4 543 303 162 6 chr17 3101611 3101925 -82336555 - L2 LINE L2 -6 3307 2945 1702 154 0 8 chr17 3102107 3102373 -82336107 + AluJb SINE Alu 29 292 -20 775 176 155 10 chr17 3102441 3102624 -82335856 - MLT1D LTR MaLR -69 436 245 1261 183 48 8 chr17 3102627 3102878 -82335602 + AluJb SINE Alu 35 295 -17 1041 96 0 0 chr17 3102974 3103109 -82335371 + AluSq/x SINE Alu 1 135 -178 2241 104 0 3 chr17 3103109 3103418 -82335062 + AluSq SINE Alu 1 308 -5 530 273 23 11 chr17 3103418 3103594 -82334886 - L2 LINE L2 -782 2532 2355 1330 180 127 43 chr17 3103594 3103658 -82334822 - MLT1D LTR MaLR -2 503 446 410 0 0 20 chr17 3103658 3103709 -82334771 + (TTA)n Simple_repeat Simple_repeat 2 51 0 1886 107 0 21 chr17 3103713 3103993 -82334487 - AluSq SINE Alu -39 274 1 1330 180 127 43 chr17 3103993 3104246 -82334234 - MLT1D LTR MaLR -61 444 154 1135 45 0 13 chr17 3104241 3104397 -82334083 - GSAT Satellite centromeric -32 185 32 * 1256 119 0 21 chr17 3104406 3104600 -82333880 - MLT1D LTR MaLR -315 190 1 452 292 176 14 chr17 3104602 3104972 -82333508 - L2 LINE L2 -1067 2247 1818 2530 43 0 3 chr17 3105152 3105457 -82333023 - AluY SINE Alu -7 304 1 207 272 25 86 chr17 3105596 3105677 -82332803 - L3 LINE CR1 -125 1452 1377 1982 91 0 17 chr17 3105809 3106117 -82332363 - AluSx SINE Alu 0 303 1 236 310 0 0 chr17 3107132 3107190 -82331290 + L2 LINE L2 3237 3294 -19 360 0 0 0 chr17 3107196 3107236 -82331244 + (TGAA)n Simple_repeat Simple_repeat 1 40 0 1907 133 7 10 chr17 3107350 3107644 -82330836 + AluSx SINE Alu 1 293 -19 2387 68 3 10 chr17 3107648 3107956 -82330524 + AluY SINE Alu 2 307 -4 286 127 0 18 chr17 3109484 3109539 -82328941 + (GGA)n Simple_repeat Simple_repeat 1 54 0 266 208 20 89 chr17 3109654 3109755 -82328725 - MIR3 SINE MIR -34 174 81 1908 120 0 43 chr17 3109818 3110144 -82328336 + AluSx SINE Alu 1 312 0 567 256 123 22 chr17 3110431 3110787 -82327693 - MLT1H1 LTR MaLR -8 547 86 521 227 14 168 chr17 3111377 3111428 -82327052 + MIR SINE MIR 21 78 -184 2512 62 0 0 chr17 3111428 3111734 -82326746 - AluY SINE Alu -5 306 1 521 227 14 168 chr17 3111734 3111826 -82326654 + MIR SINE MIR 78 182 -80 2052 114 3 19 chr17 3111826 3112141 -82326339 + AluSx SINE Alu 1 310 -2 521 227 14 168 chr17 3112141 3112173 -82326307 + MIR SINE MIR 182 217 -45 1076 147 0 6 chr17 3112173 3112336 -82326144 + FRAM SINE Alu 5 166 0 521 227 14 168 chr17 3112336 3112444 -82326036 + MIR SINE MIR 217 262 0 304 226 65 126 chr17 3113105 3113415 -82325065 - L2 LINE L2 -220 3052 2747 210 355 24 41 chr17 3113629 3113743 -82324737 + MIR3 SINE MIR 41 153 -55 1599 156 9 70 chr17 3113743 3113895 -82324585 + AluSx SINE Alu 1 124 -188 1798 126 0 48 chr17 3113895 3114205 -82324275 + AluSx SINE Alu 7 301 -11 1599 156 9 70 chr17 3114205 3114380 -82324100 + AluSx SINE Alu 124 308 -4 210 355 24 41 chr17 3114380 3114434 -82324046 + MIR3 SINE MIR 153 206 -2 237 208 250 10 chr17 3114494 3114590 -82323890 - MIR SINE MIR -69 139 21 585 100 0 0 chr17 3114924 3115004 -82323476 - AluSg/x SINE Alu -14 296 217 303 187 0 133 chr17 3115573 3115776 -82322704 + G-rich Low_complexity Low_complexity 4 179 0 1718 117 53 4 chr17 3116070 3116359 -82322121 + AluSx SINE Alu 6 307 0 2102 111 7 3 chr17 3117556 3117863 -82320617 - AluSp SINE Alu -4 309 2 2030 125 17 3 chr17 3117864 3118159 -82320321 - AluSx SINE Alu -13 299 1 389 278 26 57 chr17 3118210 3118389 -82320091 - MIR SINE MIR -61 147 14 503 299 144 10 chr17 3120386 3120580 -82317900 + MIR SINE MIR 8 227 -35 2134 119 3 10 chr17 3120599 3120909 -82317571 - AluSq SINE Alu -5 308 1 977 272 176 50 chr17 3120935 3121094 -82317386 + L2 LINE L2 2175 2313 -1000 2350 47 7 7 chr17 3121094 3121394 -82317086 + AluY SINE Alu 2 301 -10 977 272 176 50 chr17 3121394 3122053 -82316427 + L2 LINE L2 2313 3153 -160 2073 97 3 7 chr17 3122053 3122353 -82316127 - AluSx SINE Alu -13 299 1 977 272 176 50 chr17 3122353 3122536 -82315944 + L2 LINE L2 3153 3312 -1 2194 67 27 13 chr17 3123050 3123350 -82315130 + AluY SINE Alu 1 304 -7 1143 38 0 0 chr17 3123770 3123901 -82314579 + AluY SINE Alu 1 131 -180 2260 83 6 10 chr17 3123903 3124215 -82314265 + AluY SINE Alu 1 311 0 210 330 52 0 chr17 3124262 3124377 -82314103 + MIR3 SINE MIR 81 201 -7 2131 108 0 3 chr17 3125019 3125324 -82313156 + AluSq SINE Alu 1 304 -9 2182 103 6 13 chr17 3125921 3126232 -82312248 + AluSx SINE Alu 1 309 -3 803 222 0 30 chr17 3126498 3126665 -82311815 + FRAM SINE Alu 5 166 0 2492 74 0 0 chr17 3126667 3126978 -82311502 + AluSx SINE Alu 1 311 -1 193 264 58 58 chr17 3127257 3127344 -82311136 - MIR3 SINE MIR -15 193 107 2075 112 0 37 chr17 3127721 3128044 -82310436 + AluSx SINE Alu 1 311 -1 1191 126 0 6 chr17 3128044 3128218 -82310262 + AluSg/x SINE Alu 126 298 -14 2251 148 41 35 chr17 3128226 3128581 -82309899 - L1MC4 LINE L1 -201 7841 7481 2282 97 0 0 chr17 3128581 3128880 -82309600 - AluSq SINE Alu -14 299 1 2251 148 41 35 chr17 3128880 3128985 -82309495 - L1MC4 LINE L1 -561 7481 7378 2513 32 0 32 chr17 3129288 3129604 -82308876 + AluY SINE Alu 1 306 -5 1980 114 3 19 chr17 3129999 3130314 -82308166 + AluSx SINE Alu 1 310 -2 664 277 179 14 chr17 3131254 3131794 -82306686 - L2 LINE L2 0 3313 2667 694 249 69 11 chr17 3131951 3132140 -82306340 - MER3 DNA MER1_type 0 209 10 2096 84 0 0 chr17 3132229 3132504 -82305976 + AluSg SINE Alu 1 275 -35 216 301 107 102 chr17 3133068 3133380 -82305100 + L2 LINE L2 2255 2571 -743 2141 116 3 3 chr17 3133380 3133690 -82304790 - AluSx SINE Alu -2 310 1 216 301 107 102 chr17 3133690 3133799 -82304681 + L2 LINE L2 2571 2678 -636 362 20 0 20 chr17 3133861 3133910 -82304570 + AluY SINE Alu 1 48 -254 241 311 50 17 chr17 3133911 3134030 -82304450 - L3 LINE CR1 -147 1430 1308 1045 127 7 0 chr17 3134372 3134545 -82303935 - AluSq SINE Alu 0 307 134 2021 101 4 0 chr17 3134545 3134823 -82303657 - AluSx SINE Alu -12 300 22 433 246 141 7 chr17 3134823 3134965 -82303515 + MIR SINE MIR 101 261 -1 1492 123 11 84 chr17 3135097 3135240 -82303240 + AluJb SINE Alu 1 114 -198 2338 75 3 3 chr17 3135240 3135545 -82302935 + AluSp SINE Alu 1 305 -8 1492 123 11 84 chr17 3135545 3135685 -82302795 + AluJb SINE Alu 114 263 -49 283 219 55 0 chr17 3136109 3136182 -82302298 + MER105 DNA DNA 4 80 -124 1852 190 153 77 chr17 3136186 3136338 -82302142 + LTR65 LTR ERV1 1 140 -529 2268 61 0 19 chr17 3136338 3136648 -82301832 + AluY SINE Alu 1 304 -7 1852 190 153 77 chr17 3136648 3137014 -82301466 + LTR65 LTR ERV1 140 577 -92 2161 86 4 0 chr17 3137014 3137293 -82301187 + AluSx SINE Alu 5 307 0 208 0 0 0 chr17 3137293 3137316 -82301164 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 1852 190 153 77 chr17 3137316 3137415 -82301065 + LTR65 LTR ERV1 577 667 -2 2198 116 0 3 chr17 3137449 3137759 -82300721 + AluSx SINE Alu 1 309 -3 875 191 73 29 chr17 3138328 3138532 -82299948 + MER20 DNA MER1_type 6 218 -1 1404 96 5 0 chr17 3138607 3138805 -82299675 - AluSg/x SINE Alu -7 302 104 1045 127 7 0 chr17 3139035 3139208 -82299272 - AluSq SINE Alu 0 307 134 1918 111 4 4 chr17 3139208 3139487 -82298993 - AluSx SINE Alu -12 300 22 460 248 142 0 chr17 3139487 3139628 -82298852 + MIR SINE MIR 101 261 -1 1492 123 11 84 chr17 3139760 3139903 -82298577 + AluJb SINE Alu 1 114 -198 2290 80 10 0 chr17 3139903 3140205 -82298275 + AluSp SINE Alu 1 305 -8 1492 123 11 84 chr17 3140205 3140345 -82298135 + AluJb SINE Alu 114 263 -49 572 187 18 160 chr17 3140767 3140844 -82297636 + MER105 DNA DNA 4 90 -114 2104 193 159 48 chr17 3140844 3140995 -82297485 + LTR65 LTR ERV1 1 134 -535 2402 62 0 7 chr17 3140995 3141301 -82297179 + AluY SINE Alu 1 304 -7 2104 193 159 48 chr17 3141301 3141650 -82296830 + LTR65 LTR ERV1 134 582 -87 2148 86 4 0 chr17 3141650 3141952 -82296528 + AluSx SINE Alu 5 307 0 2104 193 159 48 chr17 3141952 3142051 -82296429 + LTR65 LTR ERV1 582 669 0 572 187 18 160 chr17 3142051 3142082 -82296398 + MER105 DNA DNA 90 124 -80 2222 106 3 3 chr17 3142082 3142394 -82296086 + AluSq SINE Alu 1 312 -1 572 187 18 160 chr17 3142394 3142503 -82295977 + MER105 DNA DNA 124 191 -13 257 304 104 112 chr17 3142567 3142827 -82295653 + L2 LINE L2 3007 3264 -8 2076 108 0 11 chr17 3143268 3143583 -82294897 - AluSx SINE Alu 0 312 1 1995 100 0 4 chr17 3143749 3144019 -82294461 + AluSx SINE Alu 3 271 -41 2064 100 0 29 chr17 3144712 3145021 -82293459 - AluSx SINE Alu -12 300 1 2273 95 3 3 chr17 3145098 3145404 -82293076 + AluSx SINE Alu 1 306 -6 702 223 0 42 chr17 3145409 3145575 -82292905 + AluJb SINE Alu 140 298 -14 2366 68 0 10 chr17 3146084 3146395 -82292085 + AluY SINE Alu 1 308 -3 2115 96 0 22 chr17 3146759 3147071 -82291409 + AluSg SINE Alu 1 305 -5 825 101 0 17 chr17 3147125 3147244 -82291236 - FLAM_A SINE Alu -16 117 1 993 298 51 72 chr17 3150522 3151274 -82287206 + L2 LINE L2 2266 3001 -312 2447 65 0 3 chr17 3151292 3151602 -82286878 - AluSx SINE Alu -3 309 1 2003 65 47 14 chr17 3151608 3151908 -82286572 - AluSp SINE Alu 0 309 1 1015 106 0 0 chr17 3151910 3152042 -82286438 - AluSq/x SINE Alu -180 132 1 225 265 0 0 chr17 3152043 3152092 -82286388 + L2 LINE L2 3022 3070 -243 2004 137 0 19 chr17 3152232 3152545 -82285935 + AluJo SINE Alu 5 311 -1 1972 145 0 0 chr17 3152577 3152867 -82285613 + AluJb SINE Alu 1 290 -22 2213 103 0 3 chr17 3152924 3153226 -82285254 + AluSx SINE Alu 1 301 -11 1915 116 7 7 chr17 3153781 3154093 -82284387 + AluSx SINE Alu 1 312 0 2067 123 0 16 chr17 3154545 3154862 -82283618 - AluSx SINE Alu 0 312 1 474 310 58 65 chr17 3155400 3155661 -82282819 - MLT1L LTR MaLR -221 394 136 268 320 13 0 chr17 3156094 3156169 -82282311 - L3 LINE CR1 -21 1556 1481 2037 91 0 53 chr17 3157622 3157940 -82280540 - AluSg SINE Alu -9 301 1 1333 181 15 37 chr17 3157960 3158230 -82280250 - AluJo SINE Alu -34 278 15 741 319 94 58 chr17 3159215 3159290 -82279190 - L1M4 LINE L1 -1386 4760 4689 2366 81 0 0 chr17 3159290 3159587 -82278893 + AluSc SINE Alu 1 297 -12 2240 73 7 0 chr17 3159589 3159877 -82278603 + AluY SINE Alu 1 290 -21 741 319 94 58 chr17 3159877 3160037 -82278443 - L1M4 LINE L1 -1457 4689 4536 2375 87 3 0 chr17 3160037 3160347 -82278133 - AluSp SINE Alu -1 312 2 741 319 94 58 chr17 3160347 3160437 -82278043 - L1M4 LINE L1 -1610 4536 4451 1429 176 33 23 chr17 3160437 3160738 -82277742 - AluJo SINE Alu -8 304 1 741 319 94 58 chr17 3160738 3160864 -82277616 - L1M4 LINE L1 -1695 4451 4331 1975 88 14 20 chr17 3160864 3161161 -82277319 - AluSx SINE Alu -17 295 1 741 319 94 58 chr17 3161161 3161287 -82277193 - L1M4 LINE L1 -1815 4331 4156 994 116 0 0 chr17 3161978 3162142 -82276338 + AluSg/x SINE Alu 145 308 0 2185 85 3 29 chr17 3162155 3162471 -82276009 + AluSx SINE Alu 5 312 0 1964 133 7 10 chr17 3162898 3163207 -82275273 - AluSx SINE Alu -4 308 1 2017 121 0 0 chr17 3163396 3163709 -82274771 - AluSx SINE Alu 0 313 1 2051 85 14 11 chr17 3163907 3164225 -82274255 - AluSg SINE Alu 0 319 1 546 175 133 33 chr17 3164232 3164352 -82274128 - FLAM_A SINE Alu -1 132 1 1966 103 0 0 chr17 3164636 3164907 -82273573 + AluSx SINE Alu 34 304 -8 228 296 0 0 chr17 3165209 3165263 -82273217 - L1ME LINE L1 -539 5582 5529 1251 53 0 0 chr17 3165775 3165927 -82272553 - AluYa5 SINE Alu -8 303 152 1135 101 0 0 chr17 3166027 3166176 -82272304 - AluSg SINE Alu -161 149 1 1727 155 28 17 chr17 3166581 3166872 -82271608 + AluJb SINE Alu 5 298 -14 250 322 106 28 chr17 3167235 3167415 -82271065 + MIR SINE MIR 5 198 -64 353 332 89 52 chr17 3168242 3168567 -82269913 + HAL1b LINE L1 901 1237 -111 1744 169 0 32 chr17 3168602 3168916 -82269564 + AluJb SINE Alu 1 304 -8 346 277 104 13 chr17 3168954 3169185 -82269295 + L1M4 LINE L1 5140 5391 -755 1294 97 0 6 chr17 3169215 3169391 -82269089 + AluSq SINE Alu 3 177 -136 256 83 0 42 chr17 3169491 3169539 -82268941 + Alu SINE Alu 247 292 -8 234 313 115 0 chr17 3170225 3170321 -82268159 - MIR3 SINE MIR -11 197 91 2279 50 9 41 chr17 3170379 3170698 -82267782 + AluY SINE Alu 3 311 0 661 338 80 15 chr17 3171038 3171375 -82267105 + L2 LINE L2 2914 3272 0 517 256 46 65 chr17 3171573 3171692 -82266788 - L1M4 LINE L1 -2687 3459 3339 2515 36 0 0 chr17 3171692 3171993 -82266487 - AluY SINE Alu -10 301 1 517 256 46 65 chr17 3171993 3172322 -82266158 - L1M4 LINE L1 -2807 3339 3005 803 39 10 0 chr17 3172322 3172425 -82266055 + (TTCC)n Simple_repeat Simple_repeat 1 104 0 1877 128 4 0 chr17 3172427 3172701 -82265779 - AluSx SINE Alu -37 275 1 1589 178 0 61 chr17 3172706 3173032 -82265448 - AluJb SINE Alu 0 312 7 517 256 46 65 chr17 3173032 3173198 -82265282 - L1M4 LINE L1 -3146 3000 2675 2368 69 0 0 chr17 3173199 3173490 -82264990 + AluSc SINE Alu 5 295 -14 2331 76 10 0 chr17 3173899 3174202 -82264278 - AluSx SINE Alu -6 306 1 1799 131 3 13 chr17 3174596 3174894 -82263586 - AluSq SINE Alu 0 313 19 446 224 33 20 chr17 3174994 3175146 -82263334 + L1M4 LINE L1 2227 2380 -3766 1986 115 30 3 chr17 3175151 3175446 -82263034 - AluSq SINE Alu -9 304 2 217 257 206 37 chr17 3175811 3175947 -82262533 + L2 LINE L2 3112 3270 -2 335 283 52 38 chr17 3175974 3176168 -82262312 + MIR SINE MIR 18 211 -51 239 274 170 22 chr17 3176465 3176600 -82261880 + MIR3 SINE MIR 3 157 -51 2141 95 3 3 chr17 3177974 3178270 -82260210 - AluSx SINE Alu -16 296 1 2216 88 7 3 chr17 3178485 3178781 -82259699 - AluSg SINE Alu -13 297 1 240 237 246 26 chr17 3179563 3179677 -82258803 - MER5A DNA MER1_type 0 189 51 2224 102 0 0 chr17 3179710 3180013 -82258467 + AluSx SINE Alu 1 303 -9 735 266 58 0 chr17 3182061 3182249 -82256231 + MIR SINE MIR 43 241 -21 2259 100 3 0 chr17 3183265 3183574 -82254906 - AluSp SINE Alu -3 310 1 657 209 0 0 chr17 3187139 3187292 -82251188 + (CA)n Simple_repeat Simple_repeat 1 153 0 1936 68 61 46 chr17 3189348 3189651 -82248829 + AluY SINE Alu 1 307 0 414 130 0 0 chr17 3189792 3189861 -82248619 + L1MC4 LINE L1 7475 7543 -499 1652 165 47 0 chr17 3189868 3190165 -82248315 + AluJb SINE Alu 1 311 -1 1807 179 8 66 chr17 3190184 3190762 -82247718 + L1MB5 LINE L1 5099 5651 -533 2054 122 3 6 chr17 3190762 3191073 -82247407 + AluSq SINE Alu 1 310 -3 1807 179 8 66 chr17 3191073 3191131 -82247349 + L1MB5 LINE L1 5651 5711 -473 307 109 31 47 chr17 3191132 3191196 -82247284 - AluSq SINE Alu -1 300 238 1128 144 0 28 chr17 3191196 3191376 -82247104 - AluSq SINE Alu -137 176 2 1139 186 4 30 chr17 3191379 3191615 -82246865 + L1MB5 LINE L1 5730 5959 -215 1438 86 5 10 chr17 3191615 3191813 -82246667 - AluSx SINE Alu -115 197 1 605 213 20 25 chr17 3191855 3192024 -82246456 + MLT1B LTR MaLR 166 342 -36 22 35 0 0 chr17 3193457 3193486 -82244994 + GC_rich Low_complexity Low_complexity 1 29 0 219 69 0 0 chr17 3193569 3193598 -82244882 + (TCC)n Simple_repeat Simple_repeat 1 29 0 2220 60 50 10 chr17 3193748 3194048 -82244432 - AluSx SINE Alu 0 312 1 325 330 54 0 chr17 3194902 3195014 -82243466 - MER5A DNA MER1_type -9 180 63 433 333 128 27 chr17 3195040 3195337 -82243143 + L2 LINE L2 2986 3312 -1 225 241 69 0 chr17 3196177 3196235 -82242245 - MER112 DNA MER1_type -31 229 168 1218 182 0 55 chr17 3196239 3196364 -82242116 + AluJo SINE Alu 1 131 -181 300 27 0 0 chr17 3196364 3196401 -82242079 + (CA)n Simple_repeat Simple_repeat 2 38 0 1218 182 0 55 chr17 3196401 3196421 -82242059 + AluJo SINE Alu 131 151 -161 1784 139 17 10 chr17 3196421 3196709 -82241771 + AluJo SINE Alu 1 290 -22 1218 182 0 55 chr17 3196709 3196815 -82241665 + AluJo SINE Alu 151 239 -73 259 228 145 55 chr17 3196816 3196833 -82241647 - MER112 DNA MER1_type -101 159 145 1982 122 0 0 chr17 3196833 3197293 -82241187 + AluSg SINE Alu 2 461 0 259 228 145 55 chr17 3197293 3197417 -82241063 - MER112 DNA MER1_type -115 145 2 2253 91 0 0 chr17 3197568 3197865 -82240615 + AluSg SINE Alu 1 297 -13 1648 181 24 0 chr17 3197937 3198230 -82240250 + MSTB LTR MaLR 1 300 -126 1309 100 105 9 chr17 3198457 3198667 -82239813 - MER30 DNA MER1_type 0 230 1 2020 69 47 7 chr17 3198732 3199028 -82239452 + AluSp SINE Alu 3 309 0 1792 57 4 0 chr17 3199034 3199262 -82239218 + AluSq SINE Alu 1 229 -84 2137 110 0 25 chr17 3199416 3199734 -82238746 - AluSg SINE Alu 0 310 1 298 247 62 0 chr17 3200018 3200099 -82238381 + L1ME LINE L1 5693 5778 -343 502 155 10 62 chr17 3200559 3200656 -82237824 - FRAM SINE Alu -81 95 4 272 343 72 12 chr17 3200693 3200859 -82237621 + L2 LINE L2 2883 3058 -214 1482 157 52 28 chr17 3200997 3201283 -82237197 - AluJb SINE Alu -17 295 3 2322 77 3 0 chr17 3201334 3201634 -82236846 - AluSp SINE Alu -12 301 1 2001 113 7 20 chr17 3201747 3202049 -82236431 - AluSx SINE Alu -14 298 1 640 257 48 62 chr17 3202242 3202438 -82236042 + MIR SINE MIR 38 231 -31 2167 97 3 19 chr17 3202438 3202747 -82235733 - AluSx SINE Alu -8 304 1 640 257 48 62 chr17 3202747 3202779 -82235701 + MIR SINE MIR 231 262 0 1432 66 11 0 chr17 3205270 3205453 -82233027 - AluSg/x SINE Alu -9 303 119 1902 93 0 76 chr17 3205557 3205859 -82232621 - AluSx SINE Alu -3 309 31 4870 89 136 33 chr17 3205859 3206608 -82231872 + LTR12 LTR ERV1 1 826 0 1517 165 9 71 chr17 3207034 3207356 -82231124 + AluJo SINE Alu 1 302 -10 2320 80 0 13 chr17 3207630 3207943 -82230537 + AluSp SINE Alu 1 309 -4 2137 112 3 3 chr17 3208536 3208840 -82229640 + AluSp SINE Alu 1 304 -9 1681 165 0 26 chr17 3209612 3209772 -82228708 - AluJb SINE Alu -17 295 145 2092 113 3 3 chr17 3209772 3210064 -82228416 - AluSc SINE Alu -17 292 1 1681 165 0 26 chr17 3210064 3210206 -82228274 - AluJb SINE Alu -167 145 1 1775 85 0 0 chr17 3210482 3210717 -82227763 - AluSc SINE Alu -70 239 5 692 236 109 0 chr17 3210717 3210946 -82227534 + Charlie4a DNA MER1_type 159 412 -96 2536 43 0 0 chr17 3211588 3211887 -82226593 + AluY SINE Alu 1 299 -12 180 0 0 0 chr17 3211887 3211907 -82226573 + (TA)n Simple_repeat Simple_repeat 2 21 0 209 330 78 0 chr17 3212118 3212221 -82226259 + MIR SINE MIR 30 140 -68 555 259 0 0 chr17 3212855 3213196 -82225284 + (CA)n Simple_repeat Simple_repeat 1 341 0 249 266 0 0 chr17 3213211 3213305 -82225175 + (CA)n Simple_repeat Simple_repeat 1 94 0 185 268 0 0 chr17 3213583 3213624 -82224856 + L2 LINE L2 3206 3246 -26 325 227 0 23 chr17 3214214 3214302 -82224178 - AluJ/FRAM SINE Alu 0 302 217 * 333 250 24 0 chr17 3214261 3214345 -82224135 + AluY SINE Alu 216 301 0 425 261 15 46 chr17 3214372 3214502 -82223978 + L1MC5 LINE L1 6995 7120 -841 280 109 18 18 chr17 3214514 3214569 -82223911 + (TCCC)n Simple_repeat Simple_repeat 4 58 0 2045 137 0 3 chr17 3214569 3214882 -82223598 - AluSx SINE Alu 0 312 1 262 274 68 41 chr17 3214929 3215075 -82223405 + L1MC4 LINE L1 7100 7249 -793 252 318 103 0 chr17 3215079 3215186 -82223294 + L1MC4 LINE L1 7323 7440 -602 286 286 26 0 chr17 3215191 3215268 -82223212 - MER5A DNA MER1_type -107 82 4 1843 119 3 26 chr17 3215310 3215601 -82222879 + AluSx SINE Alu 1 286 -26 192 40 0 0 chr17 3215601 3215626 -82222854 + (CA)n Simple_repeat Simple_repeat 2 26 0 1843 119 3 26 chr17 3215626 3215637 -82222843 + AluSx SINE Alu 286 296 -16 318 296 77 86 chr17 3215719 3215971 -82222509 + L1MC5 LINE L1 7340 7593 -368 2436 53 0 3 chr17 3215971 3216272 -82222208 + AluY SINE Alu 1 300 -11 318 296 77 86 chr17 3216272 3216386 -82222094 + L1MC5 LINE L1 7593 7704 -257 2165 109 0 0 chr17 3216386 3216680 -82221800 - AluSx SINE Alu -18 294 1 318 296 77 86 chr17 3216680 3216754 -82221726 + L1MC5 LINE L1 7704 7777 -184 466 253 136 6 chr17 3216755 3216917 -82221563 - MER5A DNA MER1_type -3 186 4 2078 94 16 10 chr17 3217209 3217517 -82220963 - AluSx SINE Alu -2 310 1 2066 112 3 7 chr17 3218146 3218451 -82220029 - AluSg SINE Alu -6 304 1 729 172 0 0 chr17 3218451 3218567 -82219913 - AluSg/x SINE Alu -14 296 181 1203 117 11 0 chr17 3218767 3218946 -82219534 - AluY SINE Alu -130 181 1 2334 83 0 3 chr17 3219074 3219376 -82219104 - AluSg SINE Alu -9 301 1 854 120 0 35 chr17 3219377 3219519 -82218961 - AluJo SINE Alu -175 137 1 215 333 23 0 chr17 3219560 3219647 -82218833 + L2 LINE L2 3157 3245 -27 185 268 0 0 chr17 3220554 3220595 -82217885 - L2 LINE L2 -26 3246 3206 249 266 0 0 chr17 3220874 3220968 -82217512 + (TG)n Simple_repeat Simple_repeat 1 94 0 627 253 0 0 chr17 3220983 3221332 -82217148 + (TG)n Simple_repeat Simple_repeat 1 349 0 191 333 88 0 chr17 3221966 3222068 -82216412 - MIR SINE MIR -68 140 30 216 0 0 0 chr17 3222279 3222303 -82216177 + (TA)n Simple_repeat Simple_repeat 2 25 0 2511 47 0 0 chr17 3222303 3222599 -82215881 - AluY SINE Alu -15 296 1 2174 98 0 0 chr17 3222599 3222895 -82215585 - AluSx SINE Alu -16 296 1 231 265 47 47 chr17 3223532 3223702 -82214778 + L2 LINE L2 2868 3037 -235 299 275 75 50 chr17 3224653 3224813 -82213667 + MIR3 SINE MIR 30 193 -15 1817 119 29 4 chr17 3224981 3225284 -82213196 + AluSx SINE Alu 1 310 0 679 232 7 13 chr17 3227196 3227351 -82211129 + MER3 DNA MER1_type 3 156 -53 1328 236 66 43 chr17 3228360 3228873 -82209607 + L1MC4 LINE L1 7516 8040 -2 26 0 0 0 chr17 3228874 3228900 -82209580 + AT_rich Low_complexity Low_complexity 1 26 0 2123 65 3 20 chr17 3228952 3229245 -82209235 + AluY SINE Alu 1 288 -23 487 215 25 66 chr17 3229245 3229366 -82209114 + FLAM_A SINE Alu 11 126 -16 1917 128 7 10 chr17 3229427 3229725 -82208755 + AluSx SINE Alu 1 297 -15 335 296 181 10 chr17 3229895 3230094 -82208386 - MIR SINE MIR -18 244 12 2264 81 10 0 chr17 3230131 3230429 -82208051 - AluSx SINE Alu -11 301 1 580 229 122 12 chr17 3230502 3230705 -82207775 + MLT1A2 LTR MaLR 1 236 -154 324 250 62 39 chr17 3230954 3231105 -82207375 - MIR3 SINE MIR -20 188 33 2284 77 0 3 chr17 3231254 3231551 -82206929 - AluSx SINE Alu -16 296 1 180 0 0 0 chr17 3231891 3231911 -82206569 + (A)n Simple_repeat Simple_repeat 1 20 0 190 288 106 24 chr17 3232700 3232870 -82205610 - L2 LINE L2 0 3313 3130 465 304 37 12 chr17 3232949 3233110 -82205370 - L2 LINE L2 -20 3252 3088 659 117 11 0 chr17 3233919 3234013 -82204467 - FRAM SINE Alu -24 152 58 458 164 31 23 chr17 3234055 3234178 -82204302 + L1MB8 LINE L1 5317 5441 -727 803 128 7 54 chr17 3234178 3234326 -82204154 + FLAM_C SINE Alu 1 141 -2 3121 163 82 43 chr17 3234329 3234600 -82203880 + L1MB8 LINE L1 5428 5687 -491 2083 104 3 10 chr17 3234600 3234909 -82203571 + AluSq SINE Alu 1 307 -6 3121 163 82 43 chr17 3234909 3235359 -82203121 + L1MB8 LINE L1 5687 6177 -1 22 0 0 0 chr17 3237414 3237436 -82201044 + AT_rich Low_complexity Low_complexity 1 22 0 328 129 32 0 chr17 3238926 3238988 -82199492 - AluSq SINE Alu 0 302 239 1189 99 0 12 chr17 3238988 3239150 -82199330 - AluSq SINE Alu -153 160 1 248 319 44 44 chr17 3240465 3240578 -82197902 + L2 LINE L2 2981 3093 -179 259 292 15 0 chr17 3240592 3240657 -82197823 + L2 LINE L2 3245 3310 -3 1226 194 116 47 chr17 3240771 3241091 -82197389 - MER2 DNA MER2_type -2 342 1 2182 60 21 32 chr17 3241958 3242243 -82196237 + AluY SINE Alu 14 295 -16 289 274 89 32 chr17 3242372 3242496 -82195984 + L1ME4a LINE L1 5389 5519 -602 2472 72 3 3 chr17 3242545 3242851 -82195629 + AluY SINE Alu 3 308 -3 367 259 147 45 chr17 3242947 3243159 -82195321 + L1ME4a LINE L1 5718 5974 -147 231 36 0 0 chr17 3243159 3243187 -82195293 + (CA)n Simple_repeat Simple_repeat 1 28 0 367 259 147 45 chr17 3243187 3243287 -82195193 + L1ME4a LINE L1 5974 6062 -59 303 140 0 0 chr17 3243689 3243739 -82194741 + (TCC)n Simple_repeat Simple_repeat 2 51 0 2680 213 79 20 chr17 3244005 3244476 -82194004 - MER82 DNA MER2_type -6 647 131 2463 72 0 10 chr17 3244476 3244783 -82193697 + AluY SINE Alu 1 304 -7 2680 213 79 20 chr17 3244783 3244916 -82193564 - MER82 DNA MER2_type -522 131 7 1808 171 0 33 chr17 3245156 3245460 -82193020 - AluJb SINE Alu -14 298 5 2202 101 3 10 chr17 3245873 3246171 -82192309 + AluSg SINE Alu 1 296 -14 2319 98 0 0 chr17 3246641 3246938 -82191542 - AluSx SINE Alu -5 307 11 2865 199 155 57 chr17 3248066 3248259 -82190221 + L1MC4 LINE L1 6813 6986 -1056 2228 74 3 101 chr17 3248259 3248596 -82189884 + AluSc SINE Alu 1 304 -5 2865 199 155 57 chr17 3248596 3248814 -82189666 + L1MC4 LINE L1 6986 7181 -861 826 162 0 29 chr17 3248814 3248950 -82189530 - FLAM_C SINE Alu -1 132 1 2865 199 155 57 chr17 3248950 3249538 -82188942 + L1MC4 LINE L1 7181 7911 -131 330 132 0 0 chr17 3249553 3249606 -82188874 + (CATA)n Simple_repeat Simple_repeat 2 54 0 317 167 50 0 chr17 3249606 3249666 -82188814 - L1MCa LINE L1 -4358 2068 2006 182 114 0 29 chr17 3249667 3249702 -82188778 + (CATA)n Simple_repeat Simple_repeat 4 37 0 322 227 15 0 chr17 3249702 3249768 -82188712 - L1MCa LINE L1 -4363 2063 1997 218 295 16 0 chr17 3250036 3250097 -82188383 - L3 LINE CR1 -5 1572 1511 22 0 0 0 chr17 3250293 3250315 -82188165 + AT_rich Low_complexity Low_complexity 1 22 0 819 243 128 16 chr17 3250418 3250669 -82187811 + L2 LINE L2 3035 3313 0 1592 177 57 13 chr17 3251592 3251991 -82186489 + AluJo SINE Alu 1 412 0 2153 39 19 8 chr17 3251991 3252251 -82186229 + AluY SINE Alu 33 295 -16 286 171 89 0 chr17 3252251 3252367 -82186113 + GA-rich Low_complexity Low_complexity 9 138 0 325 372 16 0 chr17 3252856 3252985 -82185495 + MIR3 SINE MIR 60 190 -18 235 170 0 0 chr17 3253082 3253129 -82185351 - L1MA10 LINE L1 -10 6324 6278 2246 129 0 0 chr17 3253137 3253446 -82185034 - AluSx SINE Alu -3 309 1 882 220 6 6 chr17 3253448 3253630 -82184850 + MER58A DNA MER1_type 43 224 0 234 312 35 28 chr17 3254861 3255002 -82183478 + L1ME4a LINE L1 4561 4702 -1444 383 217 28 32 chr17 3255047 3255226 -82183254 + L1M2 LINE L1 5283 5463 -693 404 296 165 53 chr17 3255403 3255761 -82182719 + L1ME4a LINE L1 5620 6017 -104 2266 83 10 0 chr17 3255822 3256110 -82182370 - AluSc SINE Alu -18 291 1 2474 82 3 0 chr17 3256133 3256438 -82182042 - AluSp SINE Alu -7 306 1 2302 95 7 3 chr17 3256519 3256825 -82181655 + AluY SINE Alu 1 307 -4 1804 84 33 18 chr17 3256972 3257129 -82181351 + L1MA1 LINE L1 6026 6190 -112 2371 109 0 0 chr17 3257129 3257431 -82181049 + AluSx SINE Alu 1 302 -10 1804 84 33 18 chr17 3257431 3257546 -82180934 + L1MA1 LINE L1 6190 6302 0 2401 74 10 3 chr17 3257579 3257888 -82180592 + AluY SINE Alu 1 311 0 21 100 0 0 chr17 3258001 3258071 -82180409 + AT_rich Low_complexity Low_complexity 1 70 0 1925 154 0 10 chr17 3258199 3258491 -82179989 + AluJo SINE Alu 5 293 -19 942 153 35 0 chr17 3258491 3258635 -82179845 - AluJb SINE Alu -162 150 2 810 135 15 60 chr17 3258752 3258885 -82179595 + FLAM_C SINE Alu 1 127 -16 1570 109 9 5 chr17 3259721 3259932 -82178548 + AluSp SINE Alu 1 212 -101 318 130 0 0 chr17 3259932 3259986 -82178494 + FLAM SINE Alu 78 131 -2 285 366 92 7 chr17 3260079 3260232 -82178248 + L3 LINE CR1 355 520 -1057 808 299 267 20 chr17 3260262 3261000 -82177480 + L3 LINE CR1 648 1567 -10 706 274 101 21 chr17 3261111 3261348 -82177132 + MIR SINE MIR 7 262 0 816 285 37 32 chr17 3261494 3261600 -82176880 - MIR SINE MIR -1 261 157 2487 92 0 0 chr17 3261600 3261905 -82176575 + AluSg SINE Alu 1 305 -5 816 285 37 32 chr17 3261905 3262044 -82176436 - MIR SINE MIR -105 157 15 240 242 0 32 chr17 3262050 3262096 -82176384 + MER5B DNA MER1_type 1 46 -132 2181 133 3 0 chr17 3262096 3262405 -82176075 + AluSg SINE Alu 1 310 0 240 242 0 32 chr17 3262405 3262420 -82176060 + MER5B DNA MER1_type 46 60 -118 2195 85 32 0 chr17 3262444 3262727 -82175753 + AluSg SINE Alu 1 292 -18 1767 100 60 8 chr17 3262738 3262988 -82175492 + AluSg SINE Alu 45 307 -3 29 0 0 0 chr17 3263207 3263236 -82175244 + AT_rich Low_complexity Low_complexity 1 29 0 320 282 137 3 chr17 3263237 3263354 -82175126 - MIR SINE MIR -65 143 55 644 278 44 8 chr17 3263861 3264113 -82174367 + MIR SINE MIR 2 262 0 2336 99 0 0 chr17 3264582 3264875 -82173605 - AluSx SINE Alu -19 293 1 208 205 26 0 chr17 3265041 3265080 -82173400 + MIR SINE MIR 40 79 -129 335 200 0 0 chr17 3265651 3265711 -82172769 + L2 LINE L2 3213 3272 0 251 330 22 11 chr17 3265795 3265886 -82172594 - MIR SINE MIR -115 147 56 2257 87 35 0 chr17 3266213 3266502 -82171978 - AluSc SINE Alu -10 299 1 1183 155 0 0 chr17 3266902 3267076 -82171404 + AluJb SINE Alu 125 298 -14 2050 129 0 0 chr17 3267375 3267654 -82170826 + AluSx SINE Alu 6 284 -28 1716 166 8 0 chr17 3267906 3268171 -82170309 - AluJb SINE Alu -45 267 1 1580 186 43 7 chr17 3268460 3268761 -82169719 - AluJo SINE Alu 0 312 1 2140 124 10 3 chr17 3268764 3269070 -82169410 - AluSx SINE Alu -3 309 2 336 331 23 39 chr17 3269405 3269535 -82168945 + MIR SINE MIR 3 130 -132 187 253 203 0 chr17 3269485 3269564 -82168916 + L2 LINE L2 2019 2113 -1201 * 206 220 231 22 chr17 3269705 3269796 -82168684 + L2 LINE L2 3192 3301 -12 1911 100 4 0 chr17 3269796 3270045 -82168435 + AluSp SINE Alu 1 250 -63 946 44 9 0 chr17 3270047 3270180 -82168300 + AluSp/q SINE Alu 169 302 0 251 183 366 0 chr17 3270296 3270367 -82168113 - FLAM_A SINE Alu -23 110 14 591 226 242 0 chr17 3271761 3271947 -82166533 - MIR SINE MIR -2 260 30 184 271 294 0 chr17 3272046 3272131 -82166349 - MIR SINE MIR -63 145 36 1039 121 0 0 chr17 3272269 3272513 -82165967 - FLAM_C SINE Alu 0 244 1 247 254 127 87 chr17 3272515 3272641 -82165839 + MIR3 SINE MIR 58 188 -20 542 208 82 60 chr17 3272671 3272854 -82165626 + MIR SINE MIR 20 206 -56 2206 84 49 0 chr17 3272999 3273284 -82165196 + AluSg SINE Alu 1 299 -11 180 0 0 0 chr17 3273315 3273335 -82165145 + (TG)n Simple_repeat Simple_repeat 2 21 0 627 253 78 34 chr17 3273786 3274075 -82164405 - LTR37B LTR ERV1 0 458 139 2670 43 0 0 chr17 3274087 3274389 -82164091 - AluY SINE Alu -9 302 1 2577 70 0 10 chr17 3274394 3274708 -82163772 - AluY SINE Alu 0 311 1 2143 104 0 7 chr17 3274890 3275177 -82163303 - AluSg1 SINE Alu -23 286 2 328 320 77 37 chr17 3275197 3275469 -82163011 - L2 LINE L2 -1267 2047 1765 2071 135 0 0 chr17 3275501 3275809 -82162671 - AluSx SINE Alu 0 308 1 2169 95 48 7 chr17 3276202 3276496 -82161984 - AluSx SINE Alu -6 306 1 209 271 0 17 chr17 3276523 3276582 -82161898 + CT-rich Low_complexity Low_complexity 1 58 0 2183 90 4 0 chr17 3276583 3276861 -82161619 - AluSg SINE Alu -31 279 1 507 311 167 37 chr17 3276876 3277550 -82160930 + L2 LINE L2 1928 2513 -759 1926 163 10 0 chr17 3277550 3277856 -82160624 - AluJb SINE Alu -1 311 3 507 311 167 37 chr17 3277856 3278380 -82160100 + L2 LINE L2 2513 3272 0 2402 66 0 7 chr17 3278515 3278803 -82159677 + AluSg SINE Alu 10 295 -15 237 33 0 0 chr17 3278804 3278834 -82159646 + (TCTCCC)n Simple_repeat Simple_repeat 2 31 0 10935 30 16 87 chr17 3278834 3280317 -82158163 + SVA Other Other 1 1378 -8 537 115 29 132 chr17 3280330 3280481 -82157999 + L1MC3 LINE L1 5891 6056 -1729 2165 105 0 39 chr17 3280481 3280653 -82157827 - AluSg SINE Alu -16 294 138 2360 70 0 3 chr17 3280653 3280939 -82157541 - AluY SINE Alu -26 285 1 2165 105 0 39 chr17 3280939 3281072 -82157408 - AluSg SINE Alu -172 138 1 537 115 29 132 chr17 3281072 3281334 -82157146 + L1MC3 LINE L1 6056 6343 -1442 2155 104 14 0 chr17 3281334 3281623 -82156857 - AluSx SINE Alu -19 293 1 537 115 29 132 chr17 3281623 3281675 -82156805 + L1MC3 LINE L1 6343 6399 -1386 2596 54 0 0 chr17 3281675 3281971 -82156509 - AluY SINE Alu -15 296 1 537 115 29 132 chr17 3281971 3281988 -82156492 + L1MC3 LINE L1 6399 7783 -2 562 189 9 9 chr17 3282002 3282108 -82156372 + MER5B DNA MER1_type 46 151 -27 207 313 0 0 chr17 3283133 3283181 -82155299 - L2 LINE L2 -18 3254 3207 3904 183 55 31 chr17 3283218 3283297 -82155183 + MER21B LTR ERV1 6 82 -781 2571 56 0 3 chr17 3283297 3283601 -82154879 - AluY SINE Alu -8 303 1 3904 183 55 31 chr17 3283601 3284282 -82154198 + MER21B LTR ERV1 82 790 -73 2391 56 42 0 chr17 3284282 3284568 -82153912 - AluY SINE Alu -13 298 1 3904 183 55 31 chr17 3284568 3284638 -82153842 + MER21B LTR ERV1 790 857 -6 2275 70 20 20 chr17 3284655 3284955 -82153525 + AluSx SINE Alu 5 304 -8 364 284 63 0 chr17 3284969 3285064 -82153416 - MIR SINE MIR -115 147 47 2025 128 0 23 chr17 3287860 3288164 -82150316 - AluJb SINE Alu -15 297 1 2180 105 3 10 chr17 3288441 3288745 -82149735 + AluSq SINE Alu 1 302 -11 714 175 0 17 chr17 3288819 3288939 -82149541 + FLAM_C SINE Alu 1 118 -25 2017 116 17 0 chr17 3289177 3289469 -82149011 - AluJo SINE Alu -9 303 7 2429 55 0 0 chr17 3289480 3289773 -82148707 - AluY SINE Alu -18 293 1 414 141 0 0 chr17 3289773 3289844 -82148636 - MER94 DNA DNA -53 81 11 813 293 112 49 chr17 3291846 3291951 -82146529 - L2 LINE L2 0 3313 3216 2207 91 0 7 chr17 3291951 3292248 -82146232 - AluSq SINE Alu -18 295 1 813 293 112 49 chr17 3292248 3292842 -82145638 - L2 LINE L2 -97 3216 2564 243 263 66 13 chr17 3293754 3293830 -82144650 + L2 LINE L2 3192 3271 -1 2243 90 0 3 chr17 3293879 3294178 -82144302 - AluY SINE Alu -11 300 3 2355 57 37 0 chr17 3294184 3294484 -82143996 - AluY SINE Alu 0 311 1 298 293 40 0 chr17 3295436 3295535 -82142945 - MIR SINE MIR -59 149 47 2500 51 0 0 chr17 3295596 3295892 -82142588 - AluY SINE Alu -15 296 1 2462 64 0 6 chr17 3296529 3296883 -82141597 - AluY SINE Alu 0 352 1 2080 82 89 0 chr17 3296891 3297173 -82141307 - AluSx SINE Alu -5 307 1 181 286 0 0 chr17 3297990 3298032 -82140448 + L2 LINE L2 3272 3313 0 288 380 39 8 chr17 3298797 3298926 -82139554 - L2 LINE L2 0 3272 3140 926 251 25 4 chr17 3299320 3299599 -82138881 + L1MC4 LINE L1 7460 7744 -298 2105 119 0 3 chr17 3299605 3299900 -82138580 - AluSx SINE Alu -18 294 1 1036 96 0 7 chr17 3299900 3300036 -82138444 - AluSq/x SINE Alu -178 135 1 2502 52 0 3 chr17 3300067 3300374 -82138106 + AluY SINE Alu 1 306 -5 528 177 3 9 chr17 3300374 3300498 -82137982 + L1MC4 LINE L1 7670 7785 0 1624 168 45 17 chr17 3300519 3300810 -82137670 - AluJo SINE Alu -13 299 1 185 341 57 23 chr17 3301163 3301251 -82137229 + L2 LINE L2 3168 3258 -14 214 238 0 63 chr17 3301840 3301903 -82136577 - MIR SINE MIR -130 78 20 2419 83 0 0 chr17 3301973 3302285 -82136195 - AluSx SINE Alu 0 312 1 254 316 13 0 chr17 3302792 3302868 -82135612 + G-rich Low_complexity Low_complexity 1 77 0 194 100 0 0 chr17 3302906 3302936 -82135544 - L2 LINE L2 -20 3293 3264 418 270 91 102 chr17 3303007 3303196 -82135284 + L2 LINE L2 2232 2417 -897 191 35 0 35 chr17 3303196 3303225 -82135255 + (CAAAA)n Simple_repeat Simple_repeat 4 31 0 418 270 91 102 chr17 3303225 3303409 -82135071 + L2 LINE L2 2417 2601 -713 208 254 12 23 chr17 3303766 3303863 -82134617 + MIR SINE MIR 60 153 -61 231 36 0 0 chr17 3304008 3304036 -82134444 + (TATG)n Simple_repeat Simple_repeat 1 28 0 2256 106 0 0 chr17 3304038 3304341 -82134139 - AluSq SINE Alu -10 303 1 463 312 60 54 chr17 3304462 3305086 -82133394 + L2 LINE L2 2553 3211 -61 535 263 103 4 chr17 3305938 3306170 -82132310 - MER112 DNA MER1_type -1 259 5 387 286 7 57 chr17 3306366 3306506 -82131974 + MIR SINE MIR 56 188 -74 354 262 23 78 chr17 3307063 3307251 -82131229 - MIR3 SINE MIR -67 141 15 578 190 0 0 chr17 3307341 3307441 -82131039 - MIR SINE MIR -52 210 111 267 351 52 22 chr17 3308848 3308982 -82129498 - L3 LINE CR1 -18 1559 1422 190 119 119 0 chr17 3308982 3309024 -82129456 - L3 LINE CR1 -123 1454 1408 339 352 132 20 chr17 3310203 3310507 -82127973 + L3 LINE CR1 1176 1513 -64 2118 111 0 0 chr17 3311587 3311867 -82126613 + AluSx SINE Alu 11 290 -22 219 286 102 20 chr17 3312340 3312438 -82126042 + MIR SINE MIR 32 137 -71 382 311 107 0 chr17 3313121 3313243 -82125237 + L2 LINE L2 3179 3313 0 181 270 63 16 chr17 3313248 3313311 -82125169 - MIR3 SINE MIR -37 171 106 195 279 211 0 chr17 3313516 3313620 -82124860 - MIR SINE MIR -60 148 23 468 333 92 9 chr17 3313627 3313855 -82124625 + MIR SINE MIR 16 262 0 198 0 0 0 chr17 3314141 3314163 -82124317 + (TG)n Simple_repeat Simple_repeat 2 23 0 252 304 78 48 chr17 3315654 3315884 -82122596 + L2 LINE L2 2246 2482 -832 * 280 317 208 5 chr17 3315878 3316080 -82122400 + L2 LINE L2 2817 3059 -213 1300 267 32 32 chr17 3316394 3316829 -82121651 - L2 LINE L2 -13 3300 2866 315 296 26 17 chr17 3316875 3316990 -82121490 - L2 LINE L2 -189 3083 2968 216 351 53 0 chr17 3317088 3317202 -82121278 - L2 LINE L2 -561 2753 2634 21 0 0 0 chr17 3317700 3317721 -82120759 + GC_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr17 3318187 3318209 -82120271 + GC_rich Low_complexity Low_complexity 1 22 0 240 35 0 0 chr17 3318225 3318254 -82120226 + (CCCCG)n Simple_repeat Simple_repeat 4 32 0 30 77 0 0 chr17 3318284 3318349 -82120131 + GC_rich Low_complexity Low_complexity 1 65 0 529 341 38 8 chr17 3318975 3319239 -82119241 + L2 LINE L2 2442 2713 -601 545 278 157 39 chr17 3319289 3319570 -82118910 + L2 LINE L2 2957 3270 -2 887 252 44 53 chr17 3319585 3319906 -82118574 - MLT1J LTR MaLR -191 320 3 296 275 110 16 chr17 3319940 3319999 -82118481 - MIR SINE MIR -28 234 182 800 156 0 30 chr17 3319999 3320134 -82118346 + FLAM_C SINE Alu 3 133 0 296 275 110 16 chr17 3320134 3320243 -82118237 - MIR SINE MIR -80 182 42 316 367 43 31 chr17 3320263 3320587 -82117893 - L2 LINE L2 -1266 2048 1721 781 166 52 140 chr17 3320817 3320891 -82117589 - MER3 DNA MER1_type 0 209 130 2127 83 0 28 chr17 3320891 3321181 -82117299 + AluSx SINE Alu 11 292 -20 781 166 52 140 chr17 3321181 3321335 -82117145 - MER3 DNA MER1_type -79 130 1 299 273 26 0 chr17 3321715 3321792 -82116688 - MIR3 SINE MIR -22 186 108 455 305 43 7 chr17 3322333 3322474 -82116006 - MER5A DNA MER1_type -6 183 38 919 241 50 0 chr17 3322499 3322698 -82115782 + MER3 DNA MER1_type 1 209 0 885 196 25 6 chr17 3324431 3324594 -82113886 - FRAM SINE Alu 0 166 1 2227 99 3 0 chr17 3325046 3325348 -82113132 + AluSx SINE Alu 1 303 -9 2179 120 0 3 chr17 3325398 3325706 -82112774 + AluSx SINE Alu 1 307 -5 360 339 83 32 chr17 3325872 3326090 -82112390 + L2 LINE L2 3084 3312 -1 2448 67 0 0 chr17 3326294 3326594 -82111886 - AluY SINE Alu -11 300 1 633 230 14 0 chr17 3326700 3326848 -82111632 + MER58B DNA MER1_type 190 339 -2 551 360 5 5 chr17 3327042 3327245 -82111235 - MIR SINE MIR -24 238 36 1141 119 11 17 chr17 3327343 3327520 -82110960 - AluSg/x SINE Alu -3 309 134 2139 106 7 7 chr17 3327520 3327823 -82110657 - AluSx SINE Alu -9 303 1 2216 116 0 3 chr17 3327825 3328136 -82110344 - AluSx SINE Alu -2 310 1 2169 95 3 0 chr17 3330820 3331105 -82107375 + AluSq SINE Alu 28 313 0 806 271 50 39 chr17 3331213 3331364 -82107116 + MIR SINE MIR 2 159 -103 2224 82 0 7 chr17 3331364 3331658 -82106822 - AluSc SINE Alu -17 292 1 806 271 50 39 chr17 3331658 3331764 -82106716 + MIR SINE MIR 159 262 0 1692 240 52 26 chr17 3331978 3332436 -82106044 + MLT1K LTR MaLR 4 473 -3 342 0 0 0 chr17 3332518 3332556 -82105924 + (TG)n Simple_repeat Simple_repeat 2 39 0 2133 104 10 10 chr17 3333506 3333814 -82104666 + AluSq SINE Alu 1 308 -5 382 320 51 13 chr17 3334020 3334179 -82104301 + MIR SINE MIR 21 190 -61 2236 82 0 3 chr17 3334263 3334557 -82103923 - AluSg SINE Alu -17 293 1 837 136 8 0 chr17 3334792 3334924 -82103556 + AluJb SINE Alu 1 133 -179 245 317 19 10 chr17 3334926 3335030 -82103450 - L2 LINE L2 -12 3301 3197 292 207 0 0 chr17 3335030 3335088 -82103392 - Tigger5 DNA MER2_type 0 2323 2266 238 171 0 0 chr17 3335154 3335195 -82103285 - Tigger5 DNA MER2_type 0 2323 2283 2409 81 0 0 chr17 3335195 3335502 -82102978 - AluSx SINE Alu -5 307 1 219 374 53 16 chr17 3335546 3335733 -82102747 + L2 LINE L2 2334 2527 -787 528 216 0 26 chr17 3336035 3336151 -82102329 + L2 LINE L2 3199 3311 -2 346 309 24 48 chr17 3336185 3336198 -82102282 + Charlie8 DNA MER1_type 69 81 -260 1740 177 0 16 chr17 3336198 3336515 -82101965 - AluJb SINE Alu 0 312 1 222 37 0 0 chr17 3336519 3336546 -82101934 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 346 309 24 48 chr17 3336546 3336695 -82101785 + Charlie8 DNA MER1_type 84 232 -109 1180 249 3 21 chr17 3337070 3337359 -82101121 + MLT1K LTR MaLR 142 425 -163 2381 93 0 0 chr17 3337546 3337858 -82100622 - AluSx SINE Alu 0 312 1 215 88 0 0 chr17 3338253 3338287 -82100193 + L2 LINE L2 3025 3058 -214 191 294 0 0 chr17 3338290 3338341 -82100139 - L3 LINE CR1 -111 1466 1416 2126 101 20 3 chr17 3338358 3338654 -82099826 - AluSx SINE Alu -11 301 1 245 232 29 14 chr17 3339417 3339486 -82098994 + MIR SINE MIR 29 98 -164 205 121 0 0 chr17 3339576 3339609 -82098871 + L3 LINE CR1 1423 1455 -122 364 272 18 9 chr17 3339943 3340057 -82098423 + MIR3 SINE MIR 15 129 -79 386 184 53 35 chr17 3342288 3342402 -82096078 + MIR SINE MIR 37 152 -110 340 244 106 32 chr17 3342584 3342707 -82095773 - MIR3 SINE MIR -21 187 56 354 146 11 34 chr17 3343218 3343307 -82095173 + GA-rich Low_complexity Low_complexity 1 87 0 846 99 10 48 chr17 3343314 3343616 -82094864 + (GGGA)n Simple_repeat Simple_repeat 1 290 0 417 39 0 0 chr17 3343652 3343703 -82094777 + (TCC)n Simple_repeat Simple_repeat 1 51 0 407 229 48 9 chr17 3344136 3344241 -82094239 - MIR SINE MIR -79 183 75 1782 169 0 43 chr17 3344939 3345083 -82093397 + AluJb SINE Alu 1 150 -162 1731 153 3 3 chr17 3345083 3345394 -82093086 + AluSq SINE Alu 4 314 0 1782 169 0 43 chr17 3345394 3345574 -82092906 + AluJb SINE Alu 150 312 0 2383 87 0 3 chr17 3345732 3346080 -82092400 - AluSg SINE Alu 0 347 1 307 250 0 22 chr17 3346092 3346112 -82092368 - L1MA10 LINE L1 0 6334 6315 674 314 98 15 chr17 3346112 3346437 -82092043 - L1ME1 LINE L1 -9 6157 5806 194 246 0 49 chr17 3346981 3347042 -82091438 + MIR SINE MIR 88 145 -63 239 319 0 0 chr17 3347267 3347336 -82091144 + MER45A DNA AcHobo 5 73 -105 247 286 0 0 chr17 3347525 3347588 -82090892 - L1ME3 LINE L1 -7 6155 6093 2359 92 0 0 chr17 3347592 3347897 -82090583 - AluSx SINE Alu -7 305 1 382 202 61 0 chr17 3347903 3348002 -82090478 + MER45A DNA AcHobo 74 178 0 1705 122 54 14 chr17 3348483 3348787 -82089693 + AluSx SINE Alu 1 312 0 2148 90 4 0 chr17 3351818 3352096 -82086384 - AluSx SINE Alu -33 279 1 252 199 14 96 chr17 3355379 3355525 -82082955 + (CCCCAG)n Simple_repeat Simple_repeat 1 134 0 2183 80 28 0 chr17 3356093 3356382 -82082098 + AluSx SINE Alu 1 297 -15 2588 46 0 0 chr17 3356742 3357048 -82081432 - AluY SINE Alu -5 306 1 2073 110 0 0 chr17 3357345 3357671 -82080809 - AluSx SINE Alu 0 326 1 1754 169 0 3 chr17 3357671 3357961 -82080519 - AluJb SINE Alu -17 295 7 2346 50 4 0 chr17 3358227 3358529 -82079951 + AluSx SINE Alu 1 303 0 2241 90 3 0 chr17 3358685 3358984 -82079496 + AluY SINE Alu 3 302 -9 2320 89 0 0 chr17 3359140 3359444 -82079036 - AluSx SINE Alu -1 311 8 1594 176 53 7 chr17 3359454 3359738 -82078742 - AluJb SINE Alu -15 297 1 2221 106 3 0 chr17 3359747 3360050 -82078430 - AluSx SINE Alu -8 304 1 462 228 139 15 chr17 3360554 3360756 -82077724 + MLT1K LTR MaLR 30 256 -332 2330 76 0 0 chr17 3360763 3361054 -82077426 - AluSx SINE Alu -10 302 12 664 133 20 0 chr17 3361054 3361152 -82077328 - AluS SINE Alu -213 100 1 236 277 38 107 chr17 3361152 3361311 -82077169 + MLT1K LTR MaLR 249 396 -192 339 25 0 0 chr17 3361949 3361989 -82076491 + (CA)n Simple_repeat Simple_repeat 2 41 0 214 269 32 11 chr17 3362232 3362325 -82076155 + (CA)n Simple_repeat Simple_repeat 1 95 0 205 370 11 0 chr17 3363108 3363200 -82075280 + G-rich Low_complexity Low_complexity 3 95 0 2136 108 0 0 chr17 3363379 3363667 -82074813 + AluSx SINE Alu 1 288 -24 2099 110 31 0 chr17 3363774 3364064 -82074416 - AluSx SINE Alu -13 299 1 1889 165 3 0 chr17 3364113 3364410 -82074070 + AluJo SINE Alu 1 298 -14 798 233 75 43 chr17 3364634 3364734 -82073746 + L1ME2 LINE L1 5724 5819 -345 2440 69 0 7 chr17 3364734 3365040 -82073440 + AluSc SINE Alu 1 304 -5 798 233 75 43 chr17 3365040 3365261 -82073219 + L1ME2 LINE L1 5819 6055 -109 213 65 0 0 chr17 3365261 3365292 -82073188 + (T)n Simple_repeat Simple_repeat 1 31 0 665 106 0 0 chr17 3365302 3365387 -82073093 - AluJ/FLAM SINE Alu -226 86 2 383 286 0 0 chr17 3365394 3365499 -82072981 + L1ME2 LINE L1 6050 6154 -10 2217 106 0 0 chr17 3365734 3366035 -82072445 - AluSx SINE Alu -11 301 1 1778 116 64 4 chr17 3368233 3368534 -82069946 + AluSx SINE Alu 1 317 0 504 350 86 0 chr17 3369188 3369491 -82068989 + L2 LINE L2 2439 2767 -547 25 65 0 0 chr17 3370221 3370267 -82068213 + GC_rich Low_complexity Low_complexity 1 46 0 224 255 255 20 chr17 3370657 3370759 -82067721 + MIR SINE MIR 20 145 -63 270 229 55 73 chr17 3370895 3371004 -82067476 - L3 LINE CR1 -101 1476 1370 2213 88 14 7 chr17 3371193 3371489 -82066991 + AluSc SINE Alu 1 298 -11 2030 107 3 27 chr17 3371497 3371797 -82066683 + AluSx SINE Alu 1 293 -19 437 313 78 6 chr17 3373169 3373348 -82065132 + L2 LINE L2 3094 3285 -28 908 142 15 0 chr17 3373812 3373946 -82064534 - AluJo SINE Alu -176 136 1 2329 98 3 0 chr17 3374074 3374381 -82064099 + AluSx SINE Alu 1 308 -4 871 205 35 57 chr17 3374798 3375027 -82063453 + MIR SINE MIR 39 262 0 1887 131 0 0 chr17 3375107 3375374 -82063106 + AluSq SINE Alu 1 267 -46 2263 70 0 7 chr17 3375390 3375675 -82062805 - AluSq SINE Alu -14 299 17 825 124 0 8 chr17 3376291 3376459 -82062021 + AluSg/x SINE Alu 175 312 0 753 152 42 55 chr17 3377184 3377323 -82061157 + MER5A DNA MER1_type 8 146 -43 1846 98 58 4 chr17 3377323 3377597 -82060883 - AluSx SINE Alu -23 289 1 753 152 42 55 chr17 3377597 3377622 -82060858 + MER5A DNA MER1_type 146 170 -19 956 187 36 67 chr17 3377761 3377821 -82060659 + MER20 DNA MER1_type 1 61 -158 1834 161 0 7 chr17 3377821 3378119 -82060361 - AluJo SINE Alu -16 296 1 956 187 36 67 chr17 3378119 3378283 -82060197 + MER20 DNA MER1_type 61 218 -1 274 242 30 106 chr17 3379174 3379306 -82059174 - MIR3 SINE MIR -10 198 77 2373 61 10 0 chr17 3379725 3380021 -82058459 - AluSg SINE Alu -11 299 1 226 344 23 42 chr17 3380040 3380269 -82058211 - MIR SINE MIR -8 254 30 216 310 56 0 chr17 3380338 3380409 -82058071 + MER5A DNA MER1_type 9 83 -106 2232 81 0 0 chr17 3381097 3381409 -82057071 - AluSx SINE Alu 0 312 1 366 184 11 35 chr17 3381489 3381576 -82056904 + MLT1I LTR MaLR 3 87 -322 553 247 117 7 chr17 3381651 3381805 -82056675 + MER3 DNA MER1_type 4 127 -82 494 286 47 52 chr17 3381816 3382029 -82056451 + MLT1I LTR MaLR 197 408 -1 598 290 65 9 chr17 3382368 3382582 -82055898 - MIR SINE MIR -30 232 7 693 288 64 0 chr17 3383290 3383509 -82054971 + MIR SINE MIR 8 240 -22 400 221 106 35 chr17 3383529 3383642 -82054838 + L2 LINE L2 3191 3311 -2 257 370 31 0 chr17 3383640 3383767 -82054713 + L2 LINE L2 2715 2845 -469 * 367 148 0 0 chr17 3383835 3383896 -82054584 - L1MA7 LINE L1 -3 6288 6228 416 230 29 10 chr17 3383923 3384027 -82054453 - L1MC4 LINE L1 -1339 6983 1996 382 246 0 26 chr17 3384006 3384121 -82054359 - L1MC4 LINE L1 -1339 6983 1995 * 320 259 25 25 chr17 3384051 3384126 -82054354 + L1MC3 LINE L1 6571 6646 -1134 * 2009 113 3 27 chr17 3384126 3384426 -82054054 - AluSx SINE Alu -19 293 1 340 367 136 0 chr17 3385844 3386108 -82052372 + L1MC/D LINE L1 5366 5665 -2143 506 337 16 11 chr17 3386993 3387177 -82051303 - MIR SINE MIR -55 207 23 253 260 0 14 chr17 3387429 3387502 -82050978 - MIR SINE MIR -122 140 69 * 945 243 20 0 chr17 3387473 3387675 -82050805 + MIR SINE MIR 57 262 0 39 22 0 0 chr17 3389351 3389397 -82049083 + GC_rich Low_complexity Low_complexity 1 46 0 26 50 0 0 chr17 3389585 3389625 -82048855 + GC_rich Low_complexity Low_complexity 1 40 0 25 0 0 0 chr17 3389662 3389687 -82048793 + GC_rich Low_complexity Low_complexity 1 25 0 33 0 0 0 chr17 3389711 3389744 -82048736 + GC_rich Low_complexity Low_complexity 1 33 0 2018 108 3 46 chr17 3391077 3391429 -82047051 - AluSx SINE Alu 0 338 1 1675 149 0 81 chr17 3391432 3391753 -82046727 - AluJb SINE Alu -17 295 1 232 379 47 18 chr17 3391761 3391930 -82046550 - L3 LINE CR1 -818 759 586 1619 83 0 0 chr17 3392634 3392876 -82045604 - AluSg/x SINE Alu 0 322 81 630 139 0 170 chr17 3392877 3393042 -82045438 - AluSq/x SINE Alu -175 137 1 251 347 107 37 chr17 3393155 3393397 -82045083 - L2 LINE L2 -429 2885 2627 255 198 176 11 chr17 3393489 3393580 -82044900 - MIR SINE MIR -18 244 139 761 190 0 7 chr17 3393646 3393783 -82044697 - FLAM_A SINE Alu -6 136 1 4030 195 34 35 chr17 3393787 3393823 -82044657 + MER45B DNA AcHobo 67 102 -1479 2303 85 0 3 chr17 3393823 3394128 -82044352 - AluSx SINE Alu -8 304 1 4030 195 34 35 chr17 3394128 3394889 -82043591 + MER45B DNA AcHobo 102 862 -719 2219 93 0 26 chr17 3394889 3395199 -82043281 + AluSx SINE Alu 1 302 -10 4030 195 34 35 chr17 3395199 3395302 -82043178 + MER45B DNA AcHobo 862 969 -612 1609 176 3 37 chr17 3395302 3395625 -82042855 - AluJo SINE Alu 0 312 1 4030 195 34 35 chr17 3395625 3395696 -82042784 + MER45B DNA AcHobo 969 1039 -1 274 283 186 18 chr17 3395697 3395810 -82042670 - MIR SINE MIR -116 146 15 192 375 125 23 chr17 3395916 3396132 -82042348 + L2 LINE L2 2569 2806 -508 231 326 23 30 chr17 3396345 3396477 -82042003 - MIR3 SINE MIR -27 181 51 2300 96 0 0 chr17 3396817 3397120 -82041360 + AluSq SINE Alu 1 303 -10 1765 154 33 10 chr17 3397125 3397430 -82041050 + AluJo SINE Alu 1 312 0 244 234 218 16 chr17 3397596 3397720 -82040760 - L2 LINE L2 -188 3084 2936 335 261 85 8 chr17 3399039 3399169 -82039311 + L2 LINE L2 2876 3015 -257 257 380 52 18 chr17 3399884 3400113 -82038367 + L2 LINE L2 2826 3062 -210 230 390 16 24 chr17 3400276 3400399 -82038081 + L2 LINE L2 3191 3312 -1 2202 107 3 10 chr17 3400569 3400742 -82037738 - AluSq SINE Alu -6 307 135 2487 68 0 0 chr17 3400742 3401049 -82037431 - AluY SINE Alu -4 307 1 2202 107 3 10 chr17 3401049 3401184 -82037296 - AluSq SINE Alu -178 135 1 279 284 34 23 chr17 3402890 3402978 -82035502 - MIR SINE MIR -170 92 4 373 286 95 8 chr17 3403177 3403307 -82035173 + MIR SINE MIR 42 181 -60 2241 79 3 13 chr17 3403332 3403637 -82034843 + AluSx SINE Alu 1 302 -10 627 244 78 0 chr17 3404274 3404454 -82034026 + MIR SINE MIR 9 202 -60 585 257 170 61 chr17 3404535 3404912 -82033568 + MLT1L LTR MaLR 122 539 -76 808 230 0 0 chr17 3404913 3405091 -82033389 - AluSg/x SINE Alu -1 311 134 2224 106 0 3 chr17 3405115 3405417 -82033063 + AluSg SINE Alu 1 301 -9 1571 142 0 4 chr17 3405575 3405807 -82032673 - AluJo SINE Alu -81 231 1 538 261 6 24 chr17 3405807 3405972 -82032508 + MLT1K LTR MaLR 421 582 -6 326 276 38 0 chr17 3406864 3406969 -82031511 + MIR3 SINE MIR 85 193 -15 282 29 0 0 chr17 3407394 3407429 -82031051 + (CAAAA)n Simple_repeat Simple_repeat 3 37 0 2184 107 0 3 chr17 3407551 3407850 -82030630 - AluSx SINE Alu -14 298 1 2088 93 7 0 chr17 3408775 3409087 -82029393 + AluY SINE Alu 1 314 0 389 282 83 33 chr17 3409298 3409479 -82029001 + MLT1K LTR MaLR 396 585 -3 3673 96 57 0 chr17 3409984 3410144 -82028336 - MER41A LTR ERV1 0 554 405 2236 111 7 0 chr17 3410144 3410451 -82028029 - AluSg SINE Alu -1 309 1 3673 96 57 0 chr17 3410451 3410813 -82027667 - MER41A LTR ERV1 -149 405 2 2256 96 3 0 chr17 3411039 3411342 -82027138 - AluSp SINE Alu -9 304 1 199 293 81 20 chr17 3414323 3414422 -82024058 + L3 LINE CR1 1151 1255 -322 638 183 82 127 chr17 3416142 3416664 -82021816 + Charlie1 DNA MER1_type 5 2749 -12 367 276 82 18 chr17 3417241 3417411 -82021069 + MIR3 SINE MIR 23 203 -5 1036 174 38 136 chr17 3418187 3418503 -82019977 + AluY SINE Alu 11 295 -16 2214 104 0 19 chr17 3418574 3418890 -82019590 + AluSg SINE Alu 1 310 0 927 192 6 24 chr17 3419080 3419247 -82019233 + FRAM SINE Alu 3 166 0 1771 166 0 7 chr17 3419255 3419550 -82018930 + AluJb SINE Alu 1 293 -19 568 276 165 11 chr17 3420586 3421028 -82017452 + L1ME4a LINE L1 4061 4570 -1576 490 133 0 0 chr17 3421028 3421103 -82017377 + AluJ/FRAM SINE Alu 226 300 -12 530 309 76 12 chr17 3421107 3421437 -82017043 + L1ME4a LINE L1 4918 5268 -878 207 348 0 14 chr17 3422443 3422512 -82015968 - MIR SINE MIR -125 83 16 411 209 23 0 chr17 3422836 3422922 -82015558 - L2 LINE L2 -8 3264 3177 2519 38 0 0 chr17 3425232 3425523 -82012957 + AluY SINE Alu 1 291 -20 563 242 242 15 chr17 3425745 3425943 -82012537 - MIR SINE MIR -6 256 14 1090 168 89 5 chr17 3426258 3426460 -82012020 - AluJo SINE Alu -1 311 93 243 326 141 44 chr17 3427405 3427767 -82010713 - L2 LINE L2 -10 3262 2866 2175 93 3 0 chr17 3428333 3428622 -82009858 + AluSx SINE Alu 1 290 -22 194 229 16 49 chr17 3429002 3429063 -82009417 + L3 LINE CR1 1344 1402 -175 36 53 0 0 chr17 3431067 3431124 -82007356 + AT_rich Low_complexity Low_complexity 1 57 0 732 159 0 51 chr17 3431124 3431262 -82007218 - FLAM_A SINE Alu -1 132 2 1229 153 55 0 chr17 3431285 3431521 -82006959 - MER57A LTR ERV1 -25 378 130 272 239 50 107 chr17 3431753 3431846 -82006634 + MLT1J LTR MaLR 276 373 -138 5593 50 7 29 chr17 3431846 3432573 -82005907 - SVA Other Other 0 1386 676 272 239 50 107 chr17 3432573 3432668 -82005812 + MLT1J LTR MaLR 373 511 0 503 132 0 0 chr17 3433716 3433792 -82004688 - AluJo SINE Alu -11 301 226 1380 151 27 0 chr17 3434005 3434224 -82004256 - AluJo SINE Alu -87 225 1 266 287 20 10 chr17 3435137 3435238 -82003242 + L1ME4a LINE L1 5544 5645 -476 357 329 59 26 chr17 3435419 3435571 -82002909 + L1ME4a LINE L1 5935 6091 -30 248 305 124 11 chr17 3435573 3435750 -82002730 - L3b LINE CR1 -114 1469 1273 192 125 0 0 chr17 3436491 3436523 -82001957 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 286 329 117 21 chr17 3436549 3436858 -82001622 + L2 LINE L2 2717 3056 -257 318 306 124 8 chr17 3436888 3437009 -82001471 + L2 LINE L2 3136 3270 -2 1468 187 0 39 chr17 3437125 3437430 -82001050 + AluJo SINE Alu 1 293 -19 36 53 0 0 chr17 3439440 3439497 -81998983 + AT_rich Low_complexity Low_complexity 1 57 0 705 159 0 51 chr17 3439497 3439635 -81998845 - FLAM_A SINE Alu -1 132 2 1366 153 55 0 chr17 3439658 3439894 -81998586 - MER57A LTR ERV1 -25 378 130 423 274 189 31 chr17 3439916 3440303 -81998177 + MLT1J LTR MaLR 64 511 0 492 132 0 0 chr17 3441351 3441427 -81997053 - AluJo SINE Alu -11 301 226 1325 151 27 0 chr17 3441640 3441859 -81996621 - AluJo SINE Alu -87 225 1 266 287 20 10 chr17 3442772 3442873 -81995607 + L1ME4a LINE L1 5544 5645 -476 316 286 60 53 chr17 3443054 3443187 -81995293 + L1ME4a LINE L1 5935 6068 -53 263 299 124 11 chr17 3443208 3443385 -81995095 - L3b LINE CR1 -114 1469 1273 192 125 0 0 chr17 3444126 3444158 -81994322 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 286 329 117 21 chr17 3444184 3444493 -81993987 + L2 LINE L2 2717 3056 -257 318 306 124 8 chr17 3444523 3444644 -81993836 + L2 LINE L2 3136 3270 -2 1451 190 0 39 chr17 3444760 3445065 -81993415 + AluJo SINE Alu 1 293 -19 2094 126 0 3 chr17 3445409 3445719 -81992761 - AluSx SINE Alu -3 309 1 2051 126 17 0 chr17 3446625 3446919 -81991561 + AluSx SINE Alu 1 299 -13 1624 254 44 45 chr17 3446931 3447458 -81991022 + L1MEc LINE L1 35 560 -5836 756 273 89 61 chr17 3447481 3447733 -81990747 + L1MEc LINE L1 1277 1520 -4876 2114 111 7 3 chr17 3447733 3448040 -81990440 - AluSq SINE Alu -5 308 1 756 273 89 61 chr17 3448040 3448347 -81990133 + L1MEc LINE L1 1520 1852 -4544 539 172 35 52 chr17 3448381 3448497 -81989983 - FLAM_C SINE Alu -18 115 2 2285 91 3 0 chr17 3448507 3448815 -81989665 - AluSq SINE Alu -4 309 1 1296 144 12 37 chr17 3448815 3449058 -81989422 - AluJo SINE Alu -10 302 66 502 202 0 40 chr17 3449076 3449175 -81989305 - FLAM_C SINE Alu -19 124 30 277 172 129 32 chr17 3449186 3449279 -81989201 - L1MEc LINE L1 -4258 2138 2037 732 212 109 0 chr17 3449285 3449478 -81989002 - L1MEc LINE L1 -4320 2076 1863 1892 133 7 7 chr17 3449487 3449787 -81988693 + AluSx SINE Alu 1 300 -12 621 150 150 33 chr17 3449790 3449943 -81988537 + L1MEc LINE L1 2229 2399 -3997 426 218 51 0 chr17 3450029 3450107 -81988373 - MER2 DNA MER2_type -262 83 2 1692 234 10 103 chr17 3450110 3450837 -81987643 + L1MEc LINE L1 2367 3160 -3055 2129 90 7 0 chr17 3450837 3451125 -81987355 + AluSq SINE Alu 22 311 -2 1692 234 10 103 chr17 3451125 3451136 -81987344 + L1MEc LINE L1 3160 3170 -3045 794 178 23 0 chr17 3451136 3451265 -81987215 + FLAM_C SINE Alu 2 133 0 1692 234 10 103 chr17 3451265 3451486 -81986994 + L1MEc LINE L1 3170 3362 -2853 270 157 0 39 chr17 3451594 3451645 -81986835 + Tigger5 DNA MER2_type 7 55 -2268 * 374 173 13 40 chr17 3451612 3451687 -81986793 + Tigger5 DNA MER2_type 2251 2323 0 304 111 0 0 chr17 3451704 3451749 -81986731 + L1ME3A LINE L1 4564 4608 -1538 734 136 183 8 chr17 3451762 3451955 -81986525 - AluJo SINE Alu -24 288 2 419 214 103 0 chr17 3451999 3452116 -81986364 + L1ME3A LINE L1 4633 4761 -1385 990 107 0 0 chr17 3452117 3452248 -81986232 + AluSq/x SINE Alu 1 131 -182 2030 119 0 3 chr17 3452253 3452586 -81985894 + AluSx SINE Alu 1 332 0 741 220 62 5 chr17 3452587 3452796 -81985684 + L1ME3A LINE L1 4752 4972 -1174 2157 112 0 10 chr17 3454567 3454880 -81983600 - AluSg SINE Alu 0 310 1 260 209 80 92 chr17 3455779 3455942 -81982538 - L1ME4a LINE L1 -27 6094 5934 1913 141 0 7 chr17 3455946 3456243 -81982237 + AluJb SINE Alu 1 295 -17 186 191 0 0 chr17 3456244 3456286 -81982194 + (TATG)n Simple_repeat Simple_repeat 2 43 0 25 0 0 0 chr17 3456289 3456314 -81982166 + AT_rich Low_complexity Low_complexity 1 25 0 301 252 144 50 chr17 3456447 3456586 -81981894 + HAL1 LINE L1 928 1079 -1428 1811 89 0 0 chr17 3457070 3457306 -81981174 + AluSq SINE Alu 23 258 -55 246 279 0 0 chr17 3457383 3457444 -81981036 + L1MC4 LINE L1 6460 6520 -1522 630 215 59 59 chr17 3457459 3457678 -81980802 - MER20 DNA MER1_type 0 219 1 2212 81 13 0 chr17 3457684 3457982 -81980498 + AluSq SINE Alu 1 302 -11 234 0 0 0 chr17 3458009 3458035 -81980445 + (CA)n Simple_repeat Simple_repeat 2 27 0 1254 200 216 0 chr17 3458073 3458378 -81980102 + L1MC4 LINE L1 6719 7089 -953 2065 234 55 26 chr17 3458379 3458781 -81979699 + L1MC4 LINE L1 7243 7671 -371 1615 194 10 3 chr17 3458781 3459090 -81979390 - AluJo SINE Alu -1 311 1 2065 234 55 26 chr17 3459090 3459303 -81979177 + L1MC4 LINE L1 7671 7876 -166 899 249 89 59 chr17 3459361 3459730 -81978750 + L1ME3A LINE L1 5492 5880 -290 1953 106 7 3 chr17 3459730 3460041 -81978439 + AluSx SINE Alu 1 312 0 899 249 89 59 chr17 3460041 3460134 -81978346 + L1ME3A LINE L1 5880 5969 -201 286 50 0 0 chr17 3460131 3460171 -81978309 - L1M4 LINE L1 -843 5303 5264 * 1781 132 7 7 chr17 3460387 3460700 -81977780 + AluSx SINE Alu 1 313 0 2496 46 0 3 chr17 3460845 3461148 -81977332 - AluY SINE Alu -9 302 1 305 357 124 16 chr17 3461208 3461393 -81977087 + HAL1b LINE L1 310 514 -834 382 292 51 45 chr17 3462779 3462957 -81975523 + L1M4 LINE L1 4530 4708 -1438 686 229 171 28 chr17 3462978 3463405 -81975075 + L1MC4 LINE L1 7555 8042 0 2252 88 0 10 chr17 3463879 3464186 -81974294 - AluSx SINE Alu -8 304 1 530 254 131 60 chr17 3464218 3464501 -81973979 + L2 LINE L2 3010 3312 -1 528 306 67 67 chr17 3464868 3465224 -81973256 + L2 LINE L2 2898 3253 -19 2216 110 0 0 chr17 3465713 3466021 -81972459 - AluSc SINE Alu -1 308 1 2163 96 3 0 chr17 3466076 3466367 -81972113 + AluSx SINE Alu 1 292 -20 2313 97 0 0 chr17 3467397 3467707 -81970773 - AluY SINE Alu -1 310 1 986 209 18 65 chr17 3468752 3468943 -81969537 + L1MC4 LINE L1 6820 7018 -1024 1780 166 7 0 chr17 3468943 3469239 -81969241 + AluJb SINE Alu 1 298 -14 2113 108 3 0 chr17 3469241 3469537 -81968943 + AluY SINE Alu 1 297 -14 986 209 18 65 chr17 3469537 3469620 -81968860 + L1MC4 LINE L1 7019 7084 -958 1787 94 50 43 chr17 3470293 3470592 -81967888 - AluSg SINE Alu -9 301 1 758 188 108 84 chr17 3470665 3470810 -81967670 - MIR SINE MIR -5 257 101 1816 136 7 4 chr17 3470810 3471119 -81967361 + AluJb SINE Alu 1 310 0 758 188 108 84 chr17 3471119 3471222 -81967258 - MIR SINE MIR -161 101 2 22 0 0 0 chr17 3472107 3472129 -81966351 + AT_rich Low_complexity Low_complexity 1 22 0 308 261 28 115 chr17 3472879 3473008 -81965472 + L1MC5 LINE L1 7651 7743 -218 2056 97 17 0 chr17 3473008 3473296 -81965184 - AluSx SINE Alu -19 293 1 308 261 28 115 chr17 3473296 3473453 -81965027 + L1MC5 LINE L1 7743 7912 -49 34 0 0 0 chr17 3474130 3474164 -81964316 + AT_rich Low_complexity Low_complexity 1 34 0 1847 153 0 0 chr17 3474165 3474447 -81964033 + AluSx SINE Alu 1 282 -30 356 379 73 24 chr17 3475847 3476256 -81962224 - L2 LINE L2 -18 3254 2826 261 380 120 12 chr17 3476303 3476627 -81961853 - L2 LINE L2 -575 2739 2381 220 231 77 0 chr17 3476910 3476962 -81961518 + L2 LINE L2 3258 3313 0 1551 142 46 4 chr17 3477379 3477639 -81960841 - MER1B DNA MER1_type 0 339 69 228 217 0 0 chr17 3478188 3478234 -81960246 - L2 LINE L2 -5 3308 3263 234 0 0 0 chr17 3478248 3478274 -81960206 + (TTA)n Simple_repeat Simple_repeat 2 27 0 244 231 92 15 chr17 3478314 3478379 -81960101 + MIR SINE MIR 25 94 -114 305 200 0 57 chr17 3478385 3478455 -81960025 - 5S rRNA rRNA -53 68 3 981 227 28 24 chr17 3479272 3479519 -81958961 - MIR SINE MIR -7 255 8 1656 182 7 3 chr17 3480173 3480470 -81958010 + AluJb SINE Alu 1 298 -14 573 192 90 30 chr17 3480544 3480711 -81957769 + L1ME4a LINE L1 5944 6120 -1 237 281 0 0 chr17 3481146 3481203 -81957277 - MIR SINE MIR -33 229 173 3598 282 143 45 chr17 3481212 3481863 -81956617 + L2 LINE L2 602 1188 -2125 1648 153 54 3 chr17 3481863 3482158 -81956322 + AluSx SINE Alu 1 310 -2 3598 282 143 45 chr17 3482158 3483987 -81954493 + L2 LINE L2 1188 3309 -4 188 291 0 0 chr17 3483955 3484010 -81954470 - MIR SINE MIR -48 214 160 * 493 231 130 0 chr17 3484889 3484997 -81953483 + FLAM_C SINE Alu 2 123 -20 280 125 42 0 chr17 3485146 3485194 -81953286 - Alu SINE Alu -4 298 249 1476 164 6 68 chr17 3485148 3485309 -81953171 - AluJb SINE Alu -16 296 162 2197 107 0 0 chr17 3485309 3485608 -81952872 - AluSx SINE Alu -13 299 1 1476 164 6 68 chr17 3485608 3485757 -81952723 - AluJb SINE Alu -150 162 5 1230 63 25 0 chr17 3486455 3486614 -81951866 + L1PA5 LINE L1 5989 6151 -3 1705 147 33 16 chr17 3486702 3487009 -81951471 + AluJb SINE Alu 1 312 0 673 226 96 26 chr17 3487135 3487405 -81951075 - L1MC5 LINE L1 -54 7907 7619 1624 137 0 113 chr17 3487429 3487764 -81950716 + AluJo SINE Alu 1 297 -5 238 318 124 31 chr17 3488286 3488415 -81950065 - MIR3 SINE MIR -14 194 54 24 77 0 0 chr17 3489077 3489129 -81949351 + AT_rich Low_complexity Low_complexity 1 52 0 281 212 47 0 chr17 3489139 3489224 -81949256 + L1ME4a LINE L1 5831 5919 -202 242 231 0 0 chr17 3489257 3489296 -81949184 + AluJo SINE Alu 2 40 -259 580 131 0 47 chr17 3489299 3489406 -81949074 - AluJo/FRAM SINE Alu -2 310 209 1517 182 14 0 chr17 3489406 3489681 -81948799 + AluJo SINE Alu 27 305 -7 366 279 161 0 chr17 3489705 3489866 -81948614 + L1ME4a LINE L1 5935 6121 0 1989 104 7 33 chr17 3489869 3490168 -81948312 - AluSq SINE Alu -22 291 1 362 316 43 0 chr17 3490282 3490399 -81948081 - L2 LINE L2 -8 3305 3184 2207 98 3 0 chr17 3491130 3491437 -81947043 + AluSx SINE Alu 1 308 -4 357 300 161 0 chr17 3491846 3491976 -81946504 - MIR3 SINE MIR -11 197 47 24 0 0 0 chr17 3492165 3492189 -81946291 + AT_rich Low_complexity Low_complexity 1 24 0 221 333 15 0 chr17 3492803 3492869 -81945611 - L2 LINE L2 -217 3055 2989 306 350 14 0 chr17 3492939 3493079 -81945401 - L2 LINE L2 -457 2857 2716 247 295 122 51 chr17 3493977 3494133 -81944347 - L2 LINE L2 -2 3270 3104 1705 161 0 29 chr17 3495010 3495320 -81943160 - AluJo SINE Alu -11 301 1 567 195 88 0 chr17 3496408 3496521 -81941959 - MER58A DNA MER1_type 0 160 38 2337 43 3 13 chr17 3497714 3498015 -81940465 - AluY SINE Alu -13 298 1 1894 137 0 29 chr17 3498036 3498351 -81940129 - AluSx SINE Alu -6 306 1 445 238 32 56 chr17 3498351 3498477 -81940003 + MER5B DNA MER1_type 5 127 -51 193 335 129 13 chr17 3501696 3501851 -81936629 - MIR SINE MIR -70 192 20 1004 182 9 40 chr17 3503112 3503337 -81935143 - AluJo SINE Alu -94 218 1 203 146 24 0 chr17 3503584 3503625 -81934855 + CT-rich Low_complexity Low_complexity 3 44 0 1134 101 24 0 chr17 3504541 3504709 -81933771 + AluSc SINE Alu 132 303 -6 237 273 114 45 chr17 3504709 3504841 -81933639 - MER112 DNA MER1_type -115 145 5 294 234 183 15 chr17 3505055 3505192 -81933288 + L3 LINE CR1 1346 1505 -72 1781 155 7 0 chr17 3505210 3505500 -81932980 - AluSx SINE Alu -19 293 2 581 265 155 0 chr17 3505927 3506127 -81932353 + MIR SINE MIR 6 236 -26 334 308 67 10 chr17 3506197 3506301 -81932179 + L2 LINE L2 3123 3232 -40 1602 181 0 37 chr17 3506534 3506855 -81931625 + AluSx SINE Alu 1 309 -3 1468 174 31 14 chr17 3506870 3507163 -81931317 - AluJo SINE Alu -14 298 1 678 215 117 27 chr17 3507236 3507459 -81931021 + L1MC5 LINE L1 7688 7930 -31 * 1809 254 53 30 chr17 3507457 3507994 -81930486 + L1PA14 LINE L1 405 928 -5226 1937 83 12 0 chr17 3507994 3508246 -81930234 - AluSc SINE Alu -54 255 1 541 156 37 18 chr17 3508255 3508364 -81930116 - L1MB7 LINE L1 0 6184 6074 1809 254 53 30 chr17 3508364 3508696 -81929784 + L1PA14 LINE L1 935 5780 -374 1579 107 0 0 chr17 3508736 3508952 -81929528 + AluSg SINE Alu 1 216 -94 2509 92 51 0 chr17 3508969 3509340 -81929140 + L1PA14 LINE L1 5769 6158 -3 2067 132 3 0 chr17 3509351 3509662 -81928818 + AluSx SINE Alu 1 312 0 2773 234 88 67 chr17 3509662 3510676 -81927804 + HAL1 LINE L1 1060 2107 -400 1870 155 3 3 chr17 3510676 3510979 -81927501 + AluJb SINE Alu 1 303 -9 2773 234 88 67 chr17 3510979 3511211 -81927269 + HAL1 LINE L1 2107 2333 -174 201 220 0 20 chr17 3511501 3511551 -81926929 - L2 LINE L2 -279 2993 2945 181 260 0 20 chr17 3511568 3511618 -81926862 - L2 LINE L2 -279 2993 2945 201 220 0 20 chr17 3511635 3511685 -81926795 - L2 LINE L2 -279 2993 2945 201 220 0 20 chr17 3511702 3511752 -81926728 - L2 LINE L2 -279 2993 2945 201 220 0 20 chr17 3511769 3511819 -81926661 - L2 LINE L2 -279 2993 2945 201 220 0 20 chr17 3511836 3511886 -81926594 - L2 LINE L2 -279 2993 2945 201 220 0 20 chr17 3511903 3511953 -81926527 - L2 LINE L2 -279 2993 2945 180 260 0 20 chr17 3511970 3512020 -81926460 - L2 LINE L2 -279 2993 2945 180 260 0 20 chr17 3512036 3512086 -81926394 - L2 LINE L2 -279 2993 2945 410 0 20 0 chr17 3513911 3513961 -81924519 + (TG)n Simple_repeat Simple_repeat 2 52 0 247 200 20 0 chr17 3513961 3514011 -81924469 + (CATA)n Simple_repeat Simple_repeat 2 52 0 220 289 141 74 chr17 3514514 3514560 -81923920 - MIR3 SINE MIR -62 146 104 2181 97 3 0 chr17 3514560 3514858 -81923622 + AluSg SINE Alu 3 301 -9 220 289 141 74 chr17 3514858 3514946 -81923534 - MIR3 SINE MIR -104 104 3 22 0 0 0 chr17 3515769 3515791 -81922689 + AT_rich Low_complexity Low_complexity 1 22 0 453 209 40 129 chr17 3516366 3516591 -81921889 - L1MC5 LINE L1 -46 7915 7711 1869 147 7 0 chr17 3516605 3516905 -81921575 - AluJb SINE Alu -10 302 1 832 286 96 49 chr17 3517224 3517763 -81920717 + L1M4 LINE L1 3658 4230 -1916 1202 121 0 0 chr17 3517934 3518108 -81920372 + AluSg/x SINE Alu 136 309 -3 2237 89 0 0 chr17 3518661 3518953 -81919527 + AluSq SINE Alu 1 292 -21 362 316 110 30 chr17 3519700 3519937 -81918543 + L3 LINE CR1 961 1216 -361 1764 170 3 3 chr17 3520475 3520781 -81917699 - AluJb SINE Alu -5 307 2 873 91 83 0 chr17 3521047 3521179 -81917301 + AluSp SINE Alu 1 143 -170 25 0 0 0 chr17 3521179 3521204 -81917276 + AT_rich Low_complexity Low_complexity 1 25 0 1307 76 17 0 chr17 3521207 3521413 -81917067 + AluSp SINE Alu 110 318 0 537 350 137 5 chr17 3521640 3522020 -81916460 - L3 LINE CR1 -344 1233 804 414 282 57 13 chr17 3522378 3522566 -81915914 - MIR SINE MIR -31 231 33 1985 105 0 48 chr17 3522692 3523005 -81915475 + AluSq SINE Alu 4 301 -12 285 304 64 59 chr17 3523809 3524013 -81914467 + L2 LINE L2 3086 3290 -23 1072 167 158 92 chr17 3524034 3524113 -81914367 - MER44D DNA MER2_type -1882 609 537 388 46 0 31 chr17 3524113 3524178 -81914302 + (TA)n Simple_repeat Simple_repeat 2 64 0 1072 167 158 92 chr17 3524178 3524227 -81914253 - MER44D DNA MER2_type -1954 537 493 2274 64 3 3 chr17 3524227 3524523 -81913957 + AluY SINE Alu 1 296 -15 1072 167 158 92 chr17 3524523 3524710 -81913770 - MER44D DNA MER2_type -1998 493 2 2201 84 0 19 chr17 3524761 3525069 -81913411 + AluSp SINE Alu 1 302 -11 1680 149 28 3 chr17 3525429 3525718 -81912762 + AluJb SINE Alu 1 296 -16 1903 124 14 7 chr17 3525813 3526103 -81912377 - AluSx SINE Alu -20 292 1 640 211 0 30 chr17 3526648 3526781 -81911699 - FLAM_C SINE Alu -9 134 6 958 137 0 0 chr17 3526893 3527039 -81911441 + MLT2A2 LTR ERVL 308 453 0 3715 122 14 21 chr17 3527039 3527072 -81911408 + HERVL-A2 LTR ERVL 1 33 -5621 2100 104 0 7 chr17 3527072 3527370 -81911110 - AluSg SINE Alu -14 296 1 3715 122 14 21 chr17 3527370 3527912 -81910568 + HERVL-A2 LTR ERVL 33 572 -5082 11022 107 13 0 chr17 3527914 3529391 -81909089 + HERVL LTR ERVL 2125 3620 -2034 231 260 39 77 chr17 3529405 3529509 -81908971 + MIR SINE MIR 113 212 -50 2334 78 0 7 chr17 3529773 3530081 -81908399 - AluSq SINE Alu -7 306 1 337 286 267 34 chr17 3530637 3530903 -81907577 + L2 LINE L2 2985 3312 -1 595 288 55 66 chr17 3530954 3531124 -81907356 + L1M4 LINE L1 4791 4961 -1185 1915 113 29 0 chr17 3531124 3531399 -81907081 - AluSq SINE Alu -22 291 9 595 288 55 66 chr17 3531399 3531683 -81906797 + L1M4 LINE L1 4961 5240 -906 1983 145 0 0 chr17 3531753 3532064 -81906416 - AluSx SINE Alu -1 311 1 215 235 0 86 chr17 3532080 3532118 -81906362 + MIR SINE MIR 186 215 -47 1813 124 10 29 chr17 3532118 3532424 -81906056 + AluJo SINE Alu 1 300 -12 215 235 0 86 chr17 3532424 3532466 -81906014 + MIR SINE MIR 215 259 -3 431 215 21 0 chr17 3532744 3532837 -81905643 - U13 snRNA snRNA -9 95 1 1544 174 27 14 chr17 3533459 3533753 -81904727 - AluJo SINE Alu -14 298 1 1739 124 84 0 chr17 3533764 3534037 -81904443 - AluSg SINE Alu -14 296 1 2134 141 0 0 chr17 3535003 3535302 -81903178 + AluSx SINE Alu 5 303 -9 261 0 0 0 chr17 3535353 3535382 -81903098 + (TA)n Simple_repeat Simple_repeat 2 30 0 1503 94 5 19 chr17 3535516 3535728 -81902752 + AluSq SINE Alu 94 302 -11 23 0 0 0 chr17 3535776 3535799 -81902681 + AT_rich Low_complexity Low_complexity 1 23 0 2279 112 0 22 chr17 3536379 3536693 -81901787 + AluY SINE Alu 1 307 -4 1593 62 5 0 chr17 3536859 3537051 -81901429 + AluSg/x SINE Alu 98 290 -22 2249 93 0 23 chr17 3537181 3537482 -81900998 + AluSc SINE Alu 5 298 -11 285 238 119 0 chr17 3537821 3537905 -81900575 - MIR SINE MIR -76 186 93 1633 164 0 57 chr17 3538321 3538667 -81899813 - AluJo SINE Alu 0 328 1 1839 141 40 13 chr17 3538832 3539131 -81899349 - AluSx SINE Alu -5 307 1 2182 101 6 19 chr17 3539190 3539507 -81898973 - AluSp SINE Alu 0 313 1 642 279 63 31 chr17 3539898 3540145 -81898335 + MIR SINE MIR 3 256 -6 717 251 0 6 chr17 3540400 3540583 -81897897 - MLT1E2-int LTR MaLR -1157 214 33 1572 235 70 16 chr17 3540624 3541050 -81897430 - MLT1E2 LTR MaLR 0 626 158 728 193 28 34 chr17 3541151 3541327 -81897153 - MLT1E2 LTR MaLR -330 175 1 2437 62 0 3 chr17 3542525 3542816 -81895664 - AluY SINE Alu -17 294 5 308 284 124 47 chr17 3543813 3543982 -81894498 + MIR SINE MIR 3 184 -78 2464 84 3 0 chr17 3544436 3544747 -81893733 - AluSp SINE Alu -1 312 1 192 77 0 0 chr17 3545279 3545305 -81893175 + (TA)n Simple_repeat Simple_repeat 2 27 0 2657 40 3 0 chr17 3545561 3545864 -81892616 - AluY SINE Alu -7 304 1 2121 112 7 0 chr17 3545866 3546160 -81892320 - AluSx SINE Alu -16 296 1 216 0 0 0 chr17 3546777 3546801 -81891679 + (A)n Simple_repeat Simple_repeat 1 24 0 1898 164 0 6 chr17 3546948 3547260 -81891220 + AluJb SINE Alu 1 310 -2 2004 133 7 13 chr17 3547917 3548217 -81890263 + AluJb SINE Alu 1 298 -14 1797 163 10 13 chr17 3548789 3549090 -81889390 + AluJb SINE Alu 1 300 -12 1588 153 24 0 chr17 3549115 3549370 -81889110 - AluJo SINE Alu -24 288 28 2087 138 3 13 chr17 3549609 3549921 -81888559 + AluSx SINE Alu 1 309 -3 2254 107 3 0 chr17 3550134 3550433 -81888047 - AluSp SINE Alu -13 300 1 1792 173 3 7 chr17 3551130 3551431 -81887049 - AluJb SINE Alu 0 312 13 297 285 304 0 chr17 3551456 3551726 -81886754 - L3 LINE CR1 -14 1563 1212 432 0 0 0 chr17 3552088 3552136 -81886344 + (TG)n Simple_repeat Simple_repeat 2 49 0 475 189 54 18 chr17 3553533 3553644 -81884836 - Charlie1 DNA MER1_type 0 2761 2647 189 0 0 0 chr17 3553799 3553820 -81884660 + (A)n Simple_repeat Simple_repeat 1 21 0 1944 131 16 16 chr17 3553870 3554175 -81884305 + AluSq SINE Alu 1 305 -8 243 91 0 0 chr17 3554192 3554225 -81884255 + Alu SINE Alu 1 33 -269 2052 108 9 41 chr17 3554227 3554543 -81883937 + AluSx SINE Alu 7 312 0 2409 78 10 3 chr17 3554552 3554859 -81883621 + AluSq SINE Alu 1 309 -4 1008 164 0 0 chr17 3554867 3555026 -81883454 + FRAM SINE Alu 9 167 -9 298 326 70 3 chr17 3555073 3555358 -81883122 - L1M4 LINE L1 -3442 2704 2401 35 0 0 0 chr17 3555380 3555415 -81883065 + AT_rich Low_complexity Low_complexity 1 35 0 720 62 42 0 chr17 3555415 3555511 -81882969 - HY3 scRNA scRNA -1 100 1 2201 112 7 3 chr17 3557121 3557424 -81881056 - AluSx SINE Alu -8 304 1 529 232 106 53 chr17 3557752 3557818 -81880662 + MER20 DNA MER1_type 2 63 -156 2149 132 0 0 chr17 3557818 3558114 -81880366 - AluSx SINE Alu -10 302 7 529 232 106 53 chr17 3558114 3558254 -81880226 + MER20 DNA MER1_type 63 219 0 1273 131 0 0 chr17 3559386 3559562 -81878918 - AluSp SINE Alu -4 309 134 188 296 19 0 chr17 3559780 3559834 -81878646 - MIR SINE MIR -56 152 98 337 249 69 83 chr17 3560162 3560312 -81878168 + L2 LINE L2 1564 1712 -1602 2269 117 0 0 chr17 3560312 3560620 -81877860 + AluSx SINE Alu 2 309 -3 337 249 69 83 chr17 3560620 3560686 -81877794 + L2 LINE L2 1712 1777 -1537 234 254 16 16 chr17 3560781 3560844 -81877636 - L2 LINE L2 -536 2778 2716 1029 141 22 5 chr17 3561082 3561266 -81877214 + L1PB2 LINE L1 5959 6145 -6 217 98 20 39 chr17 3561547 3561598 -81876882 + (GGA)n Simple_repeat Simple_repeat 2 51 0 665 237 63 10 chr17 3561635 3561842 -81876638 + HAL1 LINE L1 2184 2401 -106 571 84 36 0 chr17 3561857 3561940 -81876540 - HY3 scRNA scRNA -2 99 14 26 50 0 0 chr17 3562509 3562549 -81875931 + AT_rich Low_complexity Low_complexity 1 40 0 724 200 0 0 chr17 3562649 3562774 -81875706 + AluJo/FLAM SINE Alu 3 127 -175 2352 88 3 0 chr17 3562776 3563071 -81875409 + AluSg SINE Alu 1 296 -14 2194 110 3 0 chr17 3565160 3565451 -81873029 - AluSq SINE Alu -17 296 5 185 329 58 66 chr17 3566623 3566760 -81871720 + L2 LINE L2 3137 3272 0 2343 65 33 26 chr17 3567490 3567797 -81870683 - AluY SINE Alu -2 309 1 2042 137 0 29 chr17 3567818 3568133 -81870347 - AluSx SINE Alu -6 306 1 448 238 32 56 chr17 3568133 3568259 -81870221 + MER5B DNA MER1_type 5 127 -51 194 351 110 16 chr17 3571441 3571632 -81866848 - MIR SINE MIR -34 228 20 181 305 46 69 chr17 3571725 3571856 -81866624 - L2 LINE L2 -459 2855 2728 2037 168 0 0 chr17 3572918 3573228 -81865252 - AluJb SINE Alu -2 310 1 1574 206 3 19 chr17 3573251 3573561 -81864919 + AluJo SINE Alu 1 305 -7 378 363 142 20 chr17 3573722 3574130 -81864350 - L1MC4a LINE L1 -1876 5932 5475 2503 48 10 0 chr17 3575123 3575418 -81863062 + AluY SINE Alu 1 298 -13 187 274 0 65 chr17 3576271 3576333 -81862147 - MIR SINE MIR -81 181 124 274 276 104 22 chr17 3576683 3576817 -81861663 + MIR SINE MIR 47 191 -71 1760 70 86 150 chr17 3579465 3579792 -81858688 + AluSx SINE Alu 1 306 -6 2060 132 7 3 chr17 3579812 3580108 -81858372 - AluSx SINE Alu -15 297 1 1251 92 92 24 chr17 3584576 3584783 -81853697 - L1PB1 LINE L1 -2 6149 5929 325 286 47 24 chr17 3585354 3585502 -81852978 + MIR SINE MIR 38 183 -52 1497 125 133 26 chr17 3585888 3586152 -81852328 - AluSx SINE Alu -1 311 20 348 308 100 8 chr17 3586976 3587096 -81851384 + L2 LINE L2 3181 3311 -2 2003 128 7 3 chr17 3587395 3587684 -81850796 + AluJb SINE Alu 7 296 -16 292 345 50 66 chr17 3588467 3588768 -81849712 - L2 LINE L2 -45 3227 2932 2087 103 6 91 chr17 3588975 3589315 -81849165 + AluSx SINE Alu 1 311 -1 583 165 105 53 chr17 3592814 3592947 -81845533 - FLAM_A SINE Alu 0 142 3 243 320 46 86 chr17 3593116 3593291 -81845189 + MER5A DNA MER1_type 21 188 -1 212 242 158 32 chr17 3593866 3593961 -81844519 + L2 LINE L2 3204 3310 -3 687 193 0 17 chr17 3593997 3594116 -81844364 - FLAM_A SINE Alu -16 117 1 935 305 90 23 chr17 3594531 3595074 -81843406 + L2 LINE L2 2493 3068 -245 2232 128 0 0 chr17 3595202 3595506 -81842974 + AluSx SINE Alu 2 305 -7 2129 133 0 3 chr17 3596254 3596547 -81841933 - AluSx SINE Alu -11 301 10 2283 118 3 10 chr17 3596562 3596876 -81841604 - AluSx SINE Alu 0 312 1 2019 104 0 4 chr17 3597408 3597676 -81840804 - AluSx SINE Alu -45 267 1 1841 239 47 48 chr17 3598359 3598440 -81840040 + L1M4c LINE L1 2070 2150 -4232 2190 114 0 17 chr17 3598440 3598749 -81839731 + AluSx SINE Alu 1 304 0 1841 239 47 48 chr17 3598749 3598780 -81839700 + L1M4c LINE L1 2150 2180 -4202 1887 158 0 16 chr17 3598780 3599083 -81839397 + AluJo SINE Alu 1 298 -14 1841 239 47 48 chr17 3599083 3599353 -81839127 + L1M4c LINE L1 2180 2449 -3933 2583 60 0 0 chr17 3599353 3599653 -81838827 + AluY SINE Alu 1 300 -11 1841 239 47 48 chr17 3599653 3600012 -81838468 + L1M4c LINE L1 2449 2799 -3583 1525 35 29 0 chr17 3600012 3600186 -81838294 + SVA Other Other 1208 1386 0 1841 239 47 48 chr17 3600186 3600234 -81838246 + L1M4c LINE L1 2799 2846 -3536 461 213 21 0 chr17 3600235 3600329 -81838151 - AluJo SINE Alu -178 134 39 761 188 19 0 chr17 3600338 3600498 -81837982 + L1M4c LINE L1 2836 2998 -3384 728 208 39 0 chr17 3600506 3600636 -81837844 - AluJo SINE Alu -176 136 2 4289 209 37 40 chr17 3600637 3601449 -81837031 + L1M4c LINE L1 2987 3799 -2583 2064 112 0 4 chr17 3601449 3601727 -81836753 + AluSx SINE Alu 27 303 -9 4289 209 37 40 chr17 3601727 3601960 -81836520 + L1M4c LINE L1 3799 4031 -2351 2196 112 14 7 chr17 3601960 3602256 -81836224 - AluSx SINE Alu -14 298 1 4289 209 37 40 chr17 3602256 3602520 -81835960 + L1M4c LINE L1 4031 4294 -2088 761 186 54 143 chr17 3602621 3602796 -81835684 - MLT1F LTR MaLR -224 318 188 1975 162 0 0 chr17 3602796 3603086 -81835394 - AluJo SINE Alu -22 290 1 761 186 54 143 chr17 3603086 3603259 -81835221 - MLT1F LTR MaLR -354 188 1 603 264 16 36 chr17 3603269 3603462 -81835018 + L2 LINE L2 3114 3302 -11 213 39 0 0 chr17 3603497 3603523 -81834957 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1557 170 4 43 chr17 3603595 3603872 -81834608 - AluJb SINE Alu -45 267 2 275 62 0 42 chr17 3603873 3603921 -81834559 + MER65A LTR ERV1 400 445 0 2143 117 0 52 chr17 3603974 3604298 -81834182 + AluSx SINE Alu 1 307 -5 422 131 31 46 chr17 3604298 3604428 -81834052 + GA-rich Low_complexity Low_complexity 1 128 0 390 267 89 5 chr17 3604619 3604835 -81833645 + L1M4 LINE L1 5191 5424 -738 251 175 0 32 chr17 3604851 3604914 -81833566 + GA-rich Low_complexity Low_complexity 3 63 0 2272 104 0 13 chr17 3604956 3605264 -81833216 + AluSx SINE Alu 1 304 -8 2218 96 27 7 chr17 3605541 3605842 -81832638 - AluSx SINE Alu -5 307 1 391 332 156 17 chr17 3606015 3606253 -81832227 + L2 LINE L2 2079 2349 -965 814 190 70 25 chr17 3606254 3606412 -81832068 + FRAM SINE Alu 1 161 -15 516 328 72 39 chr17 3606454 3606523 -81831957 + L2 LINE L2 2376 2441 -873 1851 141 56 0 chr17 3606523 3606807 -81831673 - AluSx SINE Alu -12 300 1 516 328 72 39 chr17 3606807 3606826 -81831654 + L2 LINE L2 2441 2458 -856 2198 113 7 0 chr17 3606826 3607127 -81831353 - AluSx SINE Alu -9 303 1 516 328 72 39 chr17 3607127 3607489 -81830991 + L2 LINE L2 2458 2847 -467 2452 86 3 0 chr17 3607489 3607790 -81830690 - AluSp SINE Alu -11 302 1 516 328 72 39 chr17 3607790 3607822 -81830658 + L2 LINE L2 2847 2876 -438 263 421 64 0 chr17 3607929 3608069 -81830411 + L2 LINE L2 3123 3271 -1 1039 174 0 0 chr17 3608077 3608238 -81830242 - AluSg/x SINE Alu -16 294 134 1743 154 79 101 chr17 3608238 3608672 -81829808 + L1MB7 LINE L1 5674 6116 -68 2514 74 0 0 chr17 3608672 3608969 -81829511 + AluY SINE Alu 1 297 -14 1741 164 14 3 chr17 3608979 3609272 -81829208 + AluSx SINE Alu 13 308 -4 1778 171 31 0 chr17 3609272 3609559 -81828921 + AluJb SINE Alu 1 296 -16 1743 154 79 101 chr17 3609559 3609617 -81828863 + L1MB7 LINE L1 6123 6167 -17 352 221 12 35 chr17 3609923 3610009 -81828471 + MIR SINE MIR 41 124 -84 2463 69 0 0 chr17 3610276 3610567 -81827913 + AluY SINE Alu 1 291 -20 370 100 29 43 chr17 3610851 3610921 -81827559 + L1MB7 LINE L1 5808 5876 -308 2408 80 3 3 chr17 3611866 3612166 -81826314 - AluSq SINE Alu -13 300 1 191 386 29 0 chr17 3613862 3613932 -81824548 - MIR SINE MIR -96 112 41 1227 91 5 32 chr17 3613942 3614129 -81824351 - L1PA11 LINE L1 0 6174 5993 2402 91 0 0 chr17 3614458 3614756 -81823724 + AluSx SINE Alu 1 298 -14 439 356 75 61 chr17 3615058 3615418 -81823062 - L2 LINE L2 -2 3270 2906 1122 254 135 21 chr17 3615445 3615875 -81822605 - MLT1J LTR MaLR -27 484 6 2379 70 13 7 chr17 3618040 3618338 -81820142 - AluY SINE Alu -11 300 1 197 327 0 0 chr17 3618492 3618547 -81819933 + L2 LINE L2 2716 2770 -544 323 331 18 10 chr17 3619078 3619207 -81819273 + MIR SINE MIR 18 141 -67 362 132 0 15 chr17 3619468 3619536 -81818944 + (GGGA)n Simple_repeat Simple_repeat 4 70 0 292 129 0 48 chr17 3619536 3619598 -81818882 + (GGAGAA)n Simple_repeat Simple_repeat 3 61 0 2293 109 0 0 chr17 3619955 3620249 -81818231 + AluSg SINE Alu 1 294 -16 300 270 81 0 chr17 3620335 3620483 -81817997 + L1ME4a LINE L1 5962 6121 0 360 297 12 36 chr17 3620882 3621047 -81817433 + MLT1K LTR MaLR 126 286 -302 494 215 25 0 chr17 3621118 3621239 -81817241 + MLT1K LTR MaLR 462 585 -3 992 193 6 0 chr17 3621725 3621891 -81816589 + FAM SINE Alu 1 167 -8 1000 184 54 97 chr17 3621955 3622145 -81816335 - L1M4 LINE L1 -914 5232 5036 2064 140 0 31 chr17 3622145 3622467 -81816013 - AluSx SINE Alu 0 312 1 1000 184 54 97 chr17 3622467 3622560 -81815920 - L1M4 LINE L1 -1110 5036 4962 2328 118 0 3 chr17 3622560 3622864 -81815616 - AluSx SINE Alu -9 303 1 1000 184 54 97 chr17 3622864 3622910 -81815570 - L1M4 LINE L1 -1184 4962 4916 427 307 101 46 chr17 3623420 3623638 -81814842 + MIR SINE MIR 2 231 -31 229 181 0 113 chr17 3625097 3625274 -81813206 + G-rich Low_complexity Low_complexity 2 158 0 2160 95 0 3 chr17 3625632 3625961 -81812519 + AluSx SINE Alu 1 328 0 1026 108 43 0 chr17 3626642 3626820 -81811660 - AluSp SINE Alu 0 324 141 1684 228 49 48 chr17 3626929 3627455 -81811025 - L1MC4 LINE L1 -276 7766 7240 819 241 66 0 chr17 3627462 3627674 -81810806 - L1MC4 LINE L1 -990 7052 6827 310 155 13 25 chr17 3627694 3627773 -81810707 - AluS SINE Alu -238 65 1 265 265 0 13 chr17 3627773 3627857 -81810623 - L1MC4 LINE L1 -1474 6530 6439 270 268 14 14 chr17 3628728 3628799 -81809681 + L2 LINE L2 3198 3268 -4 2242 103 7 0 chr17 3629277 3629567 -81808913 + AluSg SINE Alu 1 292 -18 281 311 92 0 chr17 3631358 3631477 -81807003 - MER117 DNA MER1_type -22 175 46 1804 177 0 13 chr17 3631584 3631883 -81806597 - AluJb SINE Alu -17 295 1 1758 180 9 25 chr17 3631942 3632259 -81806221 - AluJb SINE Alu 0 312 1 27 29 0 0 chr17 3632598 3632632 -81805848 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr17 3632720 3632741 -81805739 + AT_rich Low_complexity Low_complexity 1 21 0 2157 117 3 13 chr17 3633589 3633898 -81804582 + AluSx SINE Alu 1 306 -6 1978 93 0 0 chr17 3634654 3634911 -81803569 - AluY SINE Alu 0 311 55 2442 93 0 0 chr17 3635673 3635975 -81802505 + AluSq SINE Alu 1 302 -11 1749 169 23 13 chr17 3635997 3636305 -81802175 + AluJo SINE Alu 1 311 -1 1039 188 66 89 chr17 3636984 3637079 -81801401 - LTR37A LTR ERV1 0 426 330 201 74 0 0 chr17 3637079 3637106 -81801374 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 1511 168 24 71 chr17 3637106 3637256 -81801224 - AluJb SINE Alu -29 283 152 2189 102 3 16 chr17 3637256 3637559 -81800921 - AluSx SINE Alu -9 303 5 1511 168 24 71 chr17 3637559 3637705 -81800775 - AluJb SINE Alu -160 152 1 1039 188 66 89 chr17 3637705 3638002 -81800478 - LTR37A LTR ERV1 -94 332 42 222 37 0 0 chr17 3638014 3638041 -81800439 + (T)n Simple_repeat Simple_repeat 1 27 0 2428 70 30 0 chr17 3638237 3638539 -81799941 - AluY SINE Alu 0 311 1 1159 138 10 20 chr17 3638954 3639157 -81799323 - L1MA2 LINE L1 0 6304 6104 194 352 33 0 chr17 3639244 3639335 -81799145 - L2 LINE L2 -6 3266 3173 663 320 93 53 chr17 3640029 3641070 -81797410 - L2 LINE L2 -13 3259 2163 1769 163 7 29 chr17 3641070 3641377 -81797103 + AluJb SINE Alu 1 300 -12 663 320 93 53 chr17 3641377 3641641 -81796839 - L2 LINE L2 -1109 2163 1911 418 260 180 0 chr17 3641813 3641963 -81796517 - MER5A DNA MER1_type 0 189 13 213 315 56 0 chr17 3642006 3642095 -81796385 - L3 LINE CR1 -67 1510 1417 356 289 162 29 chr17 3642228 3642536 -81795944 - L3 LINE CR1 -555 1022 674 2143 107 0 32 chr17 3642911 3643219 -81795261 + AluSx SINE Alu 2 299 -13 2421 88 3 0 chr17 3643553 3643858 -81794622 - AluSp SINE Alu -7 306 1 2033 134 21 3 chr17 3643861 3644152 -81794328 - AluSx SINE Alu -15 297 2 186 311 107 80 chr17 3645040 3645265 -81793215 - L2 LINE L2 -97 3175 2945 1153 60 0 0 chr17 3645383 3645517 -81792963 - AluSq/x SINE Alu -179 134 1 216 271 19 84 chr17 3645550 3645657 -81792823 - MIR3 SINE MIR -1 207 108 2490 78 3 0 chr17 3646343 3646649 -81791831 + AluSp SINE Alu 1 307 -6 280 93 19 19 chr17 3646659 3646713 -81791767 + L1MB7 LINE L1 6130 6183 -1 1801 102 0 38 chr17 3646723 3646987 -81791493 + AluSx SINE Alu 58 311 -1 312 207 35 0 chr17 3647040 3647098 -81791382 + AluS SINE Alu 2 61 -239 2332 90 3 3 chr17 3647363 3647663 -81790817 - AluSx SINE Alu -12 300 1 2072 122 0 0 chr17 3647681 3647988 -81790492 - AluSx SINE Alu 0 309 3 625 256 84 0 chr17 3648368 3648559 -81789921 - MIR SINE MIR 0 262 56 2313 92 20 3 chr17 3648568 3648872 -81789608 - AluY SINE Alu -2 309 1 670 177 15 23 chr17 3648872 3649002 -81789478 - FLAM_A SINE Alu -4 129 1 219 158 0 0 chr17 3649003 3649041 -81789439 - MIR SINE MIR -71 191 154 283 85 0 0 chr17 3649149 3649196 -81789284 + Alu SINE Alu 255 301 0 2197 65 41 31 chr17 3649237 3649531 -81788949 - AluY SINE Alu -6 305 9 884 195 227 35 chr17 3650139 3650395 -81788085 + AluSx SINE Alu 1 305 -7 1405 181 89 14 chr17 3650399 3650506 -81787974 + AluJb SINE Alu 1 99 -213 2235 117 0 0 chr17 3650506 3650804 -81787676 + AluSq SINE Alu 3 300 -13 1405 181 89 14 chr17 3650804 3650978 -81787502 + AluJb SINE Alu 99 303 -9 1703 163 46 0 chr17 3651943 3652225 -81786255 - AluJo SINE Alu -17 295 1 355 273 40 66 chr17 3652303 3652501 -81785979 - HAL1b LINE L1 -916 432 240 260 278 204 6 chr17 3653045 3653207 -81785273 - MLT1K LTR MaLR -17 571 378 194 224 0 26 chr17 3653485 3653561 -81784919 + G-rich Low_complexity Low_complexity 3 76 0 180 228 0 0 chr17 3653625 3653682 -81784798 + G-rich Low_complexity Low_complexity 1 57 0 260 266 46 29 chr17 3653720 3653893 -81784587 + G-rich Low_complexity Low_complexity 3 178 0 1253 134 0 21 chr17 3653912 3654099 -81784381 - AluSx SINE Alu -129 183 1 2345 107 0 0 chr17 3654434 3654734 -81783746 - AluSx SINE Alu -10 302 3 388 289 139 66 chr17 3654846 3654893 -81783587 - HAL1 LINE L1 -590 1917 1875 2305 98 0 3 chr17 3654893 3655189 -81783291 - AluSc SINE Alu -14 295 1 388 289 139 66 chr17 3655189 3655629 -81782851 - HAL1 LINE L1 -632 1875 1394 1834 171 13 10 chr17 3655715 3656055 -81782425 + AluJo SINE Alu 1 341 0 2289 121 0 6 chr17 3656229 3656542 -81781938 - AluSx SINE Alu -1 311 1 335 167 0 39 chr17 3656872 3656950 -81781530 + L1ME4a LINE L1 6046 6120 -1 2216 100 10 3 chr17 3656997 3657296 -81781184 + AluSx SINE Alu 1 301 -11 2321 62 10 10 chr17 3659257 3659545 -81778935 + AluSg SINE Alu 1 288 -22 336 227 106 63 chr17 3659617 3659677 -81778803 + L1MC/D LINE L1 5198 5254 -984 1901 158 7 3 chr17 3659677 3659974 -81778506 - AluJb SINE Alu -14 298 1 336 227 106 63 chr17 3659974 3660164 -81778316 + L1MC/D LINE L1 5254 5472 -766 1527 153 3 130 chr17 3660455 3660590 -81777890 + AluJb SINE Alu 1 151 -161 512 103 11 0 chr17 3660590 3660677 -81777803 + L1PB1 LINE L1 6063 6150 -1 1527 153 3 130 chr17 3660677 3660888 -81777592 + AluJb SINE Alu 151 303 -9 239 148 37 19 chr17 3660925 3660979 -81777501 + (CATA)n Simple_repeat Simple_repeat 2 56 0 719 224 46 0 chr17 3661302 3661476 -81777004 + MER5A DNA MER1_type 2 183 -6 189 107 0 0 chr17 3661703 3661731 -81776749 + (A)n Simple_repeat Simple_repeat 1 28 0 2265 97 0 10 chr17 3661816 3662115 -81776365 - AluSq SINE Alu -17 296 1 1642 212 13 0 chr17 3663200 3663502 -81774978 - AluJb SINE Alu -6 306 1 2081 135 7 0 chr17 3663610 3663907 -81774573 - AluSx SINE Alu -13 299 1 399 230 0 11 chr17 3664412 3664499 -81773981 - MIR SINE MIR -175 87 2 2627 208 73 66 chr17 3664528 3664649 -81773831 - L1ME1 LINE L1 -8 6092 5973 2291 120 3 3 chr17 3664649 3664958 -81773522 + AluSx SINE Alu 2 310 -2 2627 208 73 66 chr17 3664958 3665734 -81772746 - L1ME1 LINE L1 -127 5973 5188 1910 239 131 23 chr17 3665743 3666603 -81771877 - L1ME1 LINE L1 -2045 4035 3083 1294 98 0 6 chr17 3666603 3666776 -81771704 - AluSg/x SINE Alu -11 301 130 345 220 184 48 chr17 3666776 3666944 -81771536 - L1ME1 LINE L1 -2993 3087 2897 862 175 6 38 chr17 3666946 3667106 -81771374 - AluJo SINE Alu -138 174 20 497 218 77 12 chr17 3667127 3667297 -81771183 - L1ME1 LINE L1 -3570 2510 2330 1678 174 14 7 chr17 3667304 3667592 -81770888 + AluJb SINE Alu 2 291 -21 369 243 26 53 chr17 3667647 3667799 -81770681 - L1ME1 LINE L1 -5882 188 41 2123 123 0 3 chr17 3667998 3668291 -81770189 - AluSx SINE Alu -20 292 1 21 0 0 0 chr17 3668298 3668319 -81770161 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr17 3668400 3668423 -81770057 + AT_rich Low_complexity Low_complexity 1 23 0 1847 58 9 0 chr17 3668924 3669148 -81769332 + AluY SINE Alu 82 307 -4 650 234 96 59 chr17 3670170 3670473 -81768007 - L1MC5 LINE L1 -47 7914 7601 1662 229 112 74 chr17 3670510 3671412 -81767068 - L1MC5 LINE L1 -471 7490 6542 204 382 88 23 chr17 3672406 3672729 -81765751 + L2 LINE L2 1700 2071 -1243 2323 39 0 0 chr17 3672729 3672989 -81765491 - AluY SINE Alu -11 300 41 204 382 88 23 chr17 3672989 3673189 -81765291 + L2 LINE L2 2071 2257 -1057 2016 94 56 3 chr17 3673189 3673477 -81765003 - AluSq SINE Alu -8 305 3 1995 188 105 20 chr17 3673676 3674172 -81764308 - L1MB7 LINE L1 -56 6128 5591 1386 167 0 70 chr17 3674206 3674493 -81763987 - AluJo SINE Alu -23 289 23 2028 87 38 11 chr17 3674800 3675087 -81763393 - AluSg1 SINE Alu -10 299 5 498 33 0 0 chr17 3675163 3675223 -81763257 + (TA)n Simple_repeat Simple_repeat 2 61 0 1364 198 32 12 chr17 3675225 3675478 -81763002 - AluJo SINE Alu -31 281 24 294 179 32 0 chr17 3675479 3675574 -81762906 + (TA)n Simple_repeat Simple_repeat 2 99 0 2102 129 3 3 chr17 3675575 3675878 -81762602 - AluSg SINE Alu -7 303 1 231 306 24 0 chr17 3675919 3676004 -81762476 - L1ME4a LINE L1 -67 6054 5968 204 135 0 0 chr17 3676006 3676043 -81762437 + (TG)n Simple_repeat Simple_repeat 1 37 0 333 182 0 80 chr17 3676223 3676244 -81762236 - L1ME4a LINE L1 -327 5794 5773 2342 86 7 13 chr17 3676244 3676547 -81761933 + AluSx SINE Alu 1 301 -11 333 182 0 80 chr17 3676547 3676613 -81761867 - L1ME4a LINE L1 -348 5773 5714 230 315 177 35 chr17 3678779 3679316 -81759164 + L2 LINE L2 2248 2860 -454 2137 104 3 7 chr17 3680069 3680368 -81758112 + AluY SINE Alu 1 298 -13 985 185 45 15 chr17 3680435 3680635 -81757845 + MER3 DNA MER1_type 1 206 -3 376 250 121 0 chr17 3680981 3681105 -81757375 - MIR SINE MIR -112 150 12 2197 103 20 3 chr17 3681107 3681409 -81757071 - AluSx SINE Alu -5 307 1 425 186 23 12 chr17 3681612 3681698 -81756782 - L2 LINE L2 -43 3270 3184 * 508 304 62 41 chr17 3681690 3682087 -81756393 - L2 LINE L2 -258 3055 2653 1957 160 3 7 chr17 3682162 3682469 -81756011 + AluJb SINE Alu 1 306 -6 21 0 0 0 chr17 3682774 3682795 -81755685 + AT_rich Low_complexity Low_complexity 1 21 0 1885 136 39 0 chr17 3683034 3683314 -81755166 + AluSx SINE Alu 1 291 -21 683 171 0 8 chr17 3683872 3683989 -81754491 + AluJo/FLAM SINE Alu 2 117 -195 539 158 158 36 chr17 3683984 3684123 -81754357 - AluSg/x SINE Alu -16 296 141 * 1717 154 0 0 chr17 3684130 3684389 -81754091 - AluSx SINE Alu -53 259 1 1104 123 0 0 chr17 3684423 3684578 -81753902 + AluJb SINE Alu 132 286 -26 219 88 0 0 chr17 3685291 3685325 -81753155 + (CACCC)n Simple_repeat Simple_repeat 3 36 0 2517 74 0 0 chr17 3686751 3687050 -81751430 + AluSx SINE Alu 1 299 -13 229 299 19 37 chr17 3687141 3687248 -81751232 - L2 LINE L2 -2673 641 537 793 172 31 0 chr17 3687264 3687392 -81751088 - FLAM_C SINE Alu -1 132 1 843 185 5 43 chr17 3687530 3687714 -81750766 + FRAM SINE Alu 1 172 -4 230 176 59 0 chr17 3688264 3688315 -81750165 + L2 LINE L2 3209 3262 -10 337 234 47 55 chr17 3688337 3688465 -81750015 + MIR3 SINE MIR 33 159 -49 2469 63 3 22 chr17 3688739 3689055 -81749425 - AluSg SINE Alu 0 310 1 191 257 124 9 chr17 3689516 3689621 -81748859 + MIR SINE MIR 16 132 -130 1212 108 11 17 chr17 3692226 3692402 -81746078 + FRAM SINE Alu 1 171 -5 859 201 39 44 chr17 3694473 3694677 -81743803 - MER3 DNA MER1_type -5 204 2 251 167 83 69 chr17 3695014 3695086 -81743394 - MIR SINE MIR -31 231 159 1641 176 27 10 chr17 3695173 3695468 -81743012 - AluJo SINE Alu -10 302 3 1703 58 24 0 chr17 3695820 3696028 -81742452 - AluY SINE Alu -19 292 80 2608 50 0 0 chr17 3696028 3696324 -81742156 - AluY SINE Alu -14 297 1 1223 183 114 19 chr17 3696598 3696861 -81741619 + AluJo SINE Alu 1 288 -24 376 88 0 18 chr17 3696885 3696942 -81741538 + Alu SINE Alu 238 293 -8 1420 124 139 23 chr17 3698027 3698286 -81740194 - AluSg SINE Alu -21 289 1 445 298 165 50 chr17 3698543 3698761 -81739719 - LTR16A LTR ERVL -7 443 201 795 196 266 32 chr17 3698906 3699218 -81739262 + MLT1F1 LTR MaLR 183 567 0 1799 128 60 0 chr17 3699745 3700027 -81738453 - AluSx SINE Alu -13 299 1 1360 128 50 5 chr17 3700161 3700379 -81738101 + MER30 DNA MER1_type 1 228 -2 2209 113 3 3 chr17 3700820 3701120 -81737360 + AluSq SINE Alu 1 300 -13 277 235 78 72 chr17 3701194 3701347 -81737133 + L1 LINE L1 4882 5035 -1111 874 168 7 7 chr17 3701456 3701611 -81736869 + AluSg/x SINE Alu 135 289 -21 369 0 0 0 chr17 3701613 3701654 -81736826 + (TA)n Simple_repeat Simple_repeat 2 42 0 2003 141 3 7 chr17 3701831 3702128 -81736352 - AluSx SINE Alu -14 298 3 1818 161 43 7 chr17 3702130 3702429 -81736051 - AluSx SINE Alu -2 310 1 2236 86 21 3 chr17 3702436 3702726 -81735754 - AluSq SINE Alu -18 295 1 400 251 104 32 chr17 3702732 3703117 -81735363 + L1ME3A LINE L1 5521 5940 -230 522 69 14 0 chr17 3703566 3703638 -81734842 - U3 snRNA snRNA -144 73 1 2235 128 0 0 chr17 3703864 3704176 -81734304 - AluSx SINE Alu 0 312 1 1816 134 40 0 chr17 3705024 3705300 -81733180 + AluSg SINE Alu 1 287 -23 254 319 11 0 chr17 3705487 3705578 -81732902 + GA-rich Low_complexity Low_complexity 4 95 0 2144 114 0 20 chr17 3705662 3705968 -81732512 + AluSx SINE Alu 1 300 -12 26 30 0 0 chr17 3706049 3706082 -81732398 + AT_rich Low_complexity Low_complexity 1 33 0 2251 128 0 7 chr17 3706110 3706414 -81732066 + AluSx SINE Alu 1 302 -10 397 306 0 0 chr17 3706790 3706914 -81731566 + G-rich Low_complexity Low_complexity 1 124 0 384 249 0 0 chr17 3706926 3707091 -81731389 + G-rich Low_complexity Low_complexity 1 165 0 351 167 0 0 chr17 3707125 3707215 -81731265 + G-rich Low_complexity Low_complexity 1 90 0 1458 98 0 0 chr17 3707255 3707439 -81731041 + AluSg/x SINE Alu 116 299 -13 22 0 0 0 chr17 3707537 3707559 -81730921 + AT_rich Low_complexity Low_complexity 1 22 0 1118 208 64 13 chr17 3707744 3707980 -81730500 - MLT1F1 LTR MaLR -307 260 13 615 248 30 0 chr17 3708020 3708153 -81730327 - MER119 DNA MER1_type -391 192 56 421 167 175 0 chr17 3708639 3708753 -81729727 - L1MA9 LINE L1 -10 6302 6169 1437 204 87 63 chr17 3708795 3709212 -81729268 - L1MC4a LINE L1 0 7808 7377 1748 175 24 0 chr17 3709212 3709503 -81728977 + AluJo SINE Alu 1 298 -14 1437 204 87 63 chr17 3709503 3709546 -81728934 - L1MC4a LINE L1 -431 7377 7337 1810 174 26 10 chr17 3709658 3709962 -81728518 + AluJb SINE Alu 1 309 -3 220 295 77 0 chr17 3710014 3710092 -81728388 + L2 LINE L2 3191 3274 -39 199 396 20 41 chr17 3711619 3711816 -81726664 + L2 LINE L2 2992 3184 -88 1686 141 46 89 chr17 3711921 3712268 -81726212 + MER7A DNA MER2_type 1 330 -16 1615 167 33 46 chr17 3712501 3712807 -81725673 - AluJo SINE Alu -10 302 1 478 239 23 6 chr17 3712814 3712942 -81725538 - L1MA9 LINE L1 0 6291 6167 2329 108 7 0 chr17 3713059 3713364 -81725116 + AluSx SINE Alu 1 307 -5 2134 122 7 0 chr17 3714856 3715151 -81723329 + AluSg SINE Alu 1 297 -13 26 30 0 0 chr17 3715485 3715518 -81722962 + AT_rich Low_complexity Low_complexity 1 33 0 627 104 144 80 chr17 3716043 3716168 -81722312 + FLAM_C SINE Alu 1 133 0 2053 116 37 7 chr17 3716470 3716764 -81721716 - AluSp SINE Alu -10 303 1 2082 125 7 0 chr17 3716767 3717056 -81721424 - AluSx SINE Alu -21 291 1 1978 111 17 10 chr17 3717547 3717835 -81720645 - AluSg SINE Alu -20 290 1 441 270 146 74 chr17 3718210 3718643 -81719837 + L1MC4 LINE L1 7579 8042 0 1944 72 0 0 chr17 3718723 3718959 -81719521 - AluY SINE Alu -75 236 1 303 242 53 45 chr17 3718962 3719094 -81719386 - L1M1 LINE L1 -4139 3426 3294 938 149 24 0 chr17 3719154 3719322 -81719158 + L1MA8 LINE L1 6092 6263 -28 938 189 12 0 chr17 3719324 3719488 -81718992 + FRAM SINE Alu 1 163 -13 285 183 0 0 chr17 3719538 3719598 -81718882 + (CATA)n Simple_repeat Simple_repeat 2 61 0 1628 182 0 30 chr17 3720917 3721214 -81717266 - AluJb SINE Alu -24 288 1 334 148 0 33 chr17 3721216 3721277 -81717203 - FLAM_A SINE Alu 0 133 75 282 253 32 32 chr17 3721307 3721402 -81717078 - L2 LINE L2 -11 3302 3208 2138 117 7 0 chr17 3721512 3721810 -81716670 + AluSx SINE Alu 1 300 -12 190 176 40 135 chr17 3722168 3722210 -81716270 - L2 LINE L2 -60 3253 3219 2146 124 0 0 chr17 3722210 3722508 -81715972 + AluY SINE Alu 1 298 -13 190 176 40 135 chr17 3722508 3722539 -81715941 - L2 LINE L2 -94 3219 3187 723 162 0 63 chr17 3723013 3723155 -81715325 + FLAM_C SINE Alu 1 133 0 2136 104 0 4 chr17 3723454 3723768 -81714712 - AluSc SINE Alu 0 313 1 670 177 15 23 chr17 3723768 3723898 -81714582 - FLAM_A SINE Alu -4 129 1 596 258 16 27 chr17 3723899 3724085 -81714395 - MIR SINE MIR -71 191 8 2183 134 0 0 chr17 3724335 3724633 -81713847 - AluSx SINE Alu -14 298 1 25 0 0 0 chr17 3724652 3724677 -81713803 + AT_rich Low_complexity Low_complexity 1 25 0 1321 182 22 85 chr17 3725588 3725906 -81712574 - AluJo SINE Alu -14 298 1 488 179 8 60 chr17 3725911 3726028 -81712452 - FLAM_A SINE Alu -13 129 19 931 114 0 8 chr17 3726032 3726164 -81712316 + AluJb SINE Alu 171 301 -11 2050 133 13 0 chr17 3726169 3726471 -81712009 + AluSg SINE Alu 1 306 -4 1979 137 3 13 chr17 3727232 3727545 -81710935 + AluJb SINE Alu 1 310 -2 200 318 123 26 chr17 3727566 3727761 -81710719 + L2 LINE L2 2083 2296 -1018 310 291 250 15 chr17 3728139 3728335 -81710145 + MIR SINE MIR 21 262 0 677 228 59 41 chr17 3728406 3728552 -81709928 + MIR SINE MIR 21 174 -88 2235 129 0 15 chr17 3728552 3728894 -81709586 + MER1B DNA MER1_type 1 337 0 677 228 59 41 chr17 3728894 3728966 -81709514 + MIR SINE MIR 174 243 -19 307 54 0 0 chr17 3729078 3729115 -81709365 + AluSp SINE Alu 132 168 -135 421 123 0 0 chr17 3729115 3729172 -81709308 + AluS SINE Alu 232 288 -24 1061 146 113 17 chr17 3729564 3729803 -81708677 - MER58B DNA MER1_type 0 341 80 225 232 24 110 chr17 3729845 3729927 -81708553 - MER58B DNA MER1_type -251 90 16 1060 186 15 51 chr17 3730801 3731075 -81707405 + L1ME1 LINE L1 4382 4645 -1501 1393 163 135 0 chr17 3731075 3731320 -81707160 - AluJo SINE Alu -17 295 18 1079 233 103 21 chr17 3731333 3731711 -81706769 + L1ME1 LINE L1 4634 5042 -1104 878 136 45 32 chr17 3731720 3731875 -81706605 + FAM SINE Alu 1 46 -3 3255 193 101 43 chr17 3731920 3732175 -81706305 + L1ME1 LINE L1 4980 5219 -947 2122 111 4 0 chr17 3732175 3732455 -81706025 + AluSx SINE Alu 21 301 -11 3255 193 101 43 chr17 3732455 3732687 -81705793 + L1ME1 LINE L1 5219 5436 -730 1610 172 62 10 chr17 3732687 3732978 -81705502 + AluJo SINE Alu 1 306 -6 3255 193 101 43 chr17 3732978 3733397 -81705083 + L1ME1 LINE L1 5436 5963 -203 1771 84 0 4 chr17 3733397 3733646 -81704834 + AluSx SINE Alu 58 305 0 3255 193 101 43 chr17 3733646 3733858 -81704622 + L1ME1 LINE L1 5963 6161 -5 1406 217 73 63 chr17 3734258 3734426 -81704054 + MLT1D LTR MaLR 3 168 -337 2445 81 3 0 chr17 3734426 3734734 -81703746 + AluY SINE Alu 1 309 -2 1406 217 73 63 chr17 3734734 3735059 -81703421 + MLT1D LTR MaLR 168 501 -4 225 321 0 0 chr17 3735310 3735363 -81703117 - MIR SINE MIR -155 107 55 2034 116 7 14 chr17 3735658 3735951 -81702529 - AluSq SINE Alu -22 291 1 2363 99 0 3 chr17 3736214 3736517 -81701963 - AluSg SINE Alu -8 302 1 264 200 42 13 chr17 3736645 3736724 -81701756 - L1ME LINE L1 -557 5564 5500 2091 46 81 0 chr17 3737041 3737301 -81701179 + AluSx SINE Alu 21 301 -11 3481 169 23 73 chr17 3737924 3738709 -81699771 - L1MB8 LINE L1 -5 6173 5428 2345 100 3 0 chr17 3739102 3739441 -81699039 + AluSx SINE Alu 1 340 0 1763 142 46 14 chr17 3739597 3739879 -81698601 + AluJb SINE Alu 1 291 -21 351 202 0 0 chr17 3739903 3739987 -81698493 + GA-rich Low_complexity Low_complexity 3 86 0 219 265 0 20 chr17 3740018 3740067 -81698413 - MIR SINE MIR -164 98 51 823 248 48 41 chr17 3740067 3740337 -81698143 + HsTC2c DNA Tc2 457 728 -1 432 175 38 0 chr17 3740753 3740833 -81697647 - LTR32 LTR ERVL -77 394 312 1945 134 31 0 chr17 3741230 3741521 -81696959 - AluSx SINE Alu -12 300 1 236 358 29 3 chr17 3742037 3742222 -81696258 + L2 LINE L2 2712 2955 -317 184 250 235 0 chr17 3742266 3742334 -81696146 - L2 LINE L2 -1 3312 3229 354 231 51 0 chr17 3742356 3742434 -81696046 + MER3 DNA MER1_type 1 82 -127 293 315 176 13 chr17 3742597 3742835 -81695645 + L2 LINE L2 2921 3197 -116 296 262 87 33 chr17 3742893 3743076 -81695404 - L2 LINE L2 -1 3312 3120 694 183 95 53 chr17 3743146 3743315 -81695165 + FRAM SINE Alu 1 40 0 254 262 182 27 chr17 3744019 3744206 -81694274 - MER112 DNA MER1_type -42 218 3 1111 162 0 0 chr17 3744209 3744382 -81694098 + AluSg/x SINE Alu 126 298 -14 1917 99 4 11 chr17 3744780 3745052 -81693428 - AluSg SINE Alu 0 310 41 2213 123 0 0 chr17 3745228 3745537 -81692943 + AluSx SINE Alu 1 309 -3 1701 105 9 4 chr17 3745650 3745879 -81692601 + AluSq SINE Alu 1 230 -83 346 257 50 30 chr17 3748459 3748560 -81689920 - MIR SINE MIR -155 107 5 1341 177 117 11 chr17 3748993 3749259 -81689221 - AluJb SINE Alu -14 298 5 1919 96 82 11 chr17 3749921 3750201 -81688279 - AluSp SINE Alu -13 300 1 2352 88 3 0 chr17 3750512 3750809 -81687671 - AluSx SINE Alu -14 298 1 1636 101 9 9 chr17 3751237 3751456 -81687024 - AluSq SINE Alu -94 219 1 2299 110 0 0 chr17 3751618 3751917 -81686563 - AluSg SINE Alu -11 299 1 282 255 158 9 chr17 3752340 3752484 -81685996 - MER5A DNA MER1_type -16 162 8 366 162 0 0 chr17 3752971 3753039 -81685441 - L1MA10 LINE L1 -2 6332 6265 2234 101 3 0 chr17 3753039 3753327 -81685153 + AluSp SINE Alu 1 289 -24 1188 155 0 0 chr17 3753332 3753506 -81684974 + AluSg/x SINE Alu 123 296 -16 2016 147 3 3 chr17 3753944 3754244 -81684236 + AluSx SINE Alu 1 300 -12 192 336 75 94 chr17 3755472 3755737 -81682743 - L2 LINE L2 -417 2897 2638 3369 188 26 39 chr17 3806249 3806370 -81632110 - L1MB7 LINE L1 -8 6176 6055 2255 114 0 0 chr17 3806370 3806668 -81631812 + AluSx SINE Alu 1 298 -14 3369 188 26 39 chr17 3806668 3806848 -81631632 - L1MB7 LINE L1 -129 6055 5874 2274 107 7 0 chr17 3806848 3807146 -81631334 + AluSx SINE Alu 1 300 -12 3369 188 26 39 chr17 3807146 3807646 -81630834 - L1MB7 LINE L1 -310 5874 5384 2179 90 0 17 chr17 3807665 3807955 -81630525 + AluSg1 SINE Alu 1 285 -24 1817 125 23 15 chr17 3808100 3808364 -81630116 - AluJb SINE Alu -46 266 1 297 217 56 133 chr17 3808624 3808745 -81629735 + MER58C DNA MER1_type 1 111 -104 2510 77 3 0 chr17 3808745 3809056 -81629424 + AluSp SINE Alu 1 312 -1 297 217 56 133 chr17 3809056 3809077 -81629403 + MER58C DNA MER1_type 111 132 -83 274 137 27 41 chr17 3810320 3810393 -81628087 + (CGGGG)n Simple_repeat Simple_repeat 2 73 0 343 308 34 0 chr17 3810954 3811071 -81627409 - MIR SINE MIR -1 261 141 1736 118 77 83 chr17 3811071 3811384 -81627096 - AluSx SINE Alu -1 311 1 801 185 7 0 chr17 3811385 3811520 -81626960 - AluSq/x SINE Alu -176 136 1 342 309 12 0 chr17 3811520 3811604 -81626876 - MIR SINE MIR -115 147 63 1584 96 9 9 chr17 3812106 3812335 -81626145 - AluSq SINE Alu -84 229 1 31 0 0 0 chr17 3814518 3814549 -81623931 + GC_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr17 3815006 3815028 -81623452 + GC_rich Low_complexity Low_complexity 1 22 0 945 137 37 19 chr17 3815463 3815624 -81622856 - AluJo SINE Alu -41 271 108 2330 92 3 0 chr17 3815633 3815936 -81622544 + AluSx SINE Alu 5 308 -4 1314 85 11 26 chr17 3815938 3816127 -81622353 + AluY SINE Alu 126 311 0 1135 116 18 0 chr17 3816390 3816554 -81621926 - AluSq SINE Alu -68 245 79 853 193 0 0 chr17 3817134 3817274 -81621206 - FLAM_C SINE Alu -3 140 1 2240 89 7 7 chr17 3817472 3817786 -81620694 - AluSp SINE Alu 0 314 1 2242 124 7 0 chr17 3818060 3818358 -81620122 - AluSx SINE Alu -12 300 1 667 169 0 17 chr17 3818449 3818567 -81619913 + FLAM_C SINE Alu 2 117 -26 2553 57 0 0 chr17 3818680 3818976 -81619504 - AluY SINE Alu -15 296 1 720 165 0 0 chr17 3819240 3819355 -81619125 - AluSc SINE Alu -52 257 143 1414 264 41 2 chr17 3819501 3819937 -81618543 + L2 LINE L2 2262 2714 -600 633 197 39 0 chr17 3819937 3820064 -81618416 + FLAM_C SINE Alu 2 133 0 2119 209 43 16 chr17 3820064 3820691 -81617789 + L1M4 LINE L1 3126 3769 -2377 2174 82 0 38 chr17 3820693 3821164 -81617316 + AluY SINE Alu 1 460 0 480 164 27 0 chr17 3821179 3821289 -81617191 + GA-rich Low_complexity Low_complexity 1 113 0 1393 115 6 0 chr17 3821419 3821602 -81616878 - AluSx SINE Alu -128 184 1 2233 103 3 3 chr17 3821602 3821904 -81616576 - AluSx SINE Alu -5 307 6 1895 132 24 14 chr17 3821911 3822207 -81616273 - AluSx SINE Alu -13 299 1 397 281 150 22 chr17 3822210 3822523 -81615957 + L2 LINE L2 524 876 -2438 2208 114 0 26 chr17 3822523 3822829 -81615651 - AluSg SINE Alu -7 303 6 2282 106 6 3 chr17 3822856 3823168 -81615312 - AluSq SINE Alu 0 313 1 2223 83 30 17 chr17 3823323 3823623 -81614857 + AluSc SINE Alu 1 304 -5 192 40 0 0 chr17 3824164 3824189 -81614291 + (TAA)n Simple_repeat Simple_repeat 1 25 0 1162 106 5 96 chr17 3824337 3824563 -81613917 + AluSg/x SINE Alu 117 324 0 234 128 0 0 chr17 3824811 3824850 -81613630 + (CTCA)n Simple_repeat Simple_repeat 1 39 0 1306 88 0 0 chr17 3824863 3825033 -81613447 + AluSg/x SINE Alu 137 306 -6 186 362 39 16 chr17 3825069 3825196 -81613284 - L2 LINE L2 -2 3311 3182 766 181 44 111 chr17 3825448 3825718 -81612762 + AluJb SINE Alu 61 312 0 1381 105 0 0 chr17 3826497 3826669 -81611811 + AluSq SINE Alu 36 207 -106 1913 137 26 7 chr17 3827789 3828095 -81610385 + AluSq SINE Alu 1 312 -1 788 103 26 0 chr17 3828349 3828465 -81610015 - LTR8 LTR ERV1 0 691 573 2030 125 26 20 chr17 3828465 3828769 -81609711 - AluSq SINE Alu -6 307 2 1228 206 112 55 chr17 3828811 3828863 -81609617 + MLT1D LTR MaLR 1 49 -456 3156 135 6 21 chr17 3828863 3829398 -81609082 + MER1A DNA MER1_type 1 527 0 1228 206 112 55 chr17 3829398 3829747 -81608733 + MLT1D LTR MaLR 49 425 -80 2231 99 6 29 chr17 3829777 3830091 -81608389 - AluSq SINE Alu -6 307 1 2207 116 0 13 chr17 3830129 3830431 -81608049 - AluSx SINE Alu -14 298 1 1576 157 74 68 chr17 3830502 3830546 -81607934 + MSTD LTR MaLR 1 43 -353 2337 114 0 0 chr17 3830546 3830845 -81607635 - AluSq SINE Alu -12 301 3 1576 157 74 68 chr17 3830845 3831194 -81607286 + MSTD LTR MaLR 43 396 0 2311 107 7 0 chr17 3831220 3831519 -81606961 + AluSx SINE Alu 1 301 -11 366 133 17 0 chr17 3831521 3831581 -81606899 + AluJ/FLAM SINE Alu 1 61 -241 1711 167 38 0 chr17 3831727 3831991 -81606489 - AluJb SINE Alu -22 290 17 1008 187 45 107 chr17 3831991 3832105 -81606375 - L1MC5 LINE L1 -306 7655 7535 2504 73 3 0 chr17 3832105 3832407 -81606073 + AluSp SINE Alu 1 303 -10 1008 187 45 107 chr17 3832407 3832554 -81605926 - L1MC5 LINE L1 -426 7535 7431 2349 100 7 3 chr17 3832554 3832864 -81605616 + AluSq SINE Alu 1 311 -2 1008 187 45 107 chr17 3832864 3833050 -81605430 - L1MC5 LINE L1 -530 7431 7235 1381 167 4 4 chr17 3833069 3833297 -81605183 - AluJb SINE Alu 0 312 85 2324 93 7 0 chr17 3833354 3833654 -81604826 - AluSx SINE Alu -10 302 1 338 256 143 30 chr17 3833654 3833787 -81604693 + LTR67 LTR ERVL 28 175 -382 2189 121 13 0 chr17 3833847 3834153 -81604327 - AluY SINE Alu -1 310 1 644 256 18 0 chr17 3834265 3834429 -81604051 + LTR67 LTR ERVL 384 550 -7 1293 68 6 12 chr17 3834561 3834724 -81603756 - AluSq SINE Alu -151 162 1 228 273 98 35 chr17 3834830 3834973 -81603507 - L1ME LINE L1 -202 5919 5768 2421 81 3 0 chr17 3834982 3835277 -81603203 - AluSp SINE Alu -17 296 1 263 200 53 40 chr17 3835277 3835352 -81603128 - L1ME LINE L1 -2021 5787 5712 1102 176 20 39 chr17 3835367 3835411 -81603069 - L1MB3 LINE L1 0 6183 6140 2218 114 0 10 chr17 3835411 3835574 -81602906 - AluSx SINE Alu -16 296 136 2400 78 7 13 chr17 3835574 3835880 -81602600 - AluY SINE Alu -7 304 1 2218 114 0 10 chr17 3835880 3836015 -81602465 - AluSx SINE Alu -176 136 1 1102 176 20 39 chr17 3836015 3836225 -81602255 - L1MB3 LINE L1 -43 6140 5934 1674 176 4 7 chr17 3836226 3836505 -81601975 + AluJb SINE Alu 3 280 -32 260 51 0 26 chr17 3836509 3836548 -81601932 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 2422 93 0 3 chr17 3836548 3836858 -81601622 + AluSx SINE Alu 1 309 -3 23 0 0 0 chr17 3836858 3836881 -81601599 + AT_rich Low_complexity Low_complexity 1 23 0 368 194 11 43 chr17 3836881 3836974 -81601506 - L1MB3 LINE L1 -232 5948 5859 307 107 0 0 chr17 3836974 3837030 -81601450 - Alu SINE Alu 0 302 247 386 232 20 10 chr17 3837179 3837278 -81601202 - MLT1L LTR MaLR -108 507 408 1322 238 100 26 chr17 3837284 3837635 -81600845 - MLT1F LTR MaLR -4 538 150 2294 121 0 0 chr17 3837635 3837941 -81600539 - AluSx SINE Alu -6 306 1 1322 238 100 26 chr17 3837941 3838009 -81600471 - MLT1F LTR MaLR -392 150 88 2305 109 0 6 chr17 3838131 3838442 -81600038 - AluSq SINE Alu -4 309 1 249 326 22 0 chr17 3838534 3838626 -81599854 - MLT1L LTR MaLR -319 296 203 1958 130 27 0 chr17 3838720 3839013 -81599467 + AluSg SINE Alu 1 301 -9 346 242 97 32 chr17 3839090 3839214 -81599266 + L1ME4a LINE L1 5936 6067 -54 2322 110 0 0 chr17 3839302 3839601 -81598879 + AluSg SINE Alu 1 299 -11 420 319 137 21 chr17 3839601 3840024 -81598456 - L2 LINE L2 -648 2666 2195 809 176 8 0 chr17 3840028 3840181 -81598299 + FLAM_C SINE Alu 2 155 0 26 0 0 0 chr17 3840264 3840290 -81598190 + AT_rich Low_complexity Low_complexity 1 26 0 277 256 12 23 chr17 3840649 3840735 -81597745 + CT-rich Low_complexity Low_complexity 2 86 0 2440 84 0 0 chr17 3840847 3841143 -81597337 + AluSg SINE Alu 1 296 -14 1259 109 0 0 chr17 3841143 3841308 -81597172 + AluSg/x SINE Alu 132 296 -13 2415 100 0 0 chr17 3841319 3841630 -81596850 + AluY SINE Alu 1 311 0 2397 109 0 3 chr17 3841661 3841973 -81596507 + AluSq SINE Alu 1 311 -2 2253 116 0 0 chr17 3842105 3842406 -81596074 + AluSx SINE Alu 5 305 -7 2150 97 47 3 chr17 3842427 3842727 -81595753 + AluSp SINE Alu 1 313 0 1810 171 0 10 chr17 3842846 3843144 -81595336 + AluJo SINE Alu 15 309 -3 383 252 89 44 chr17 3843182 3843317 -81595163 - MIR SINE MIR -13 249 109 182 263 84 53 chr17 3844040 3844135 -81594345 + MIR SINE MIR 164 261 -1 353 311 53 29 chr17 3844347 3844553 -81593927 - L1M4 LINE L1 -2693 3453 3243 2260 102 0 7 chr17 3844585 3844888 -81593592 - AluSc SINE Alu -8 301 1 2448 99 0 0 chr17 3845094 3845407 -81593073 - AluSq SINE Alu 0 313 1 815 218 62 6 chr17 3845417 3845596 -81592884 - AluJb SINE Alu 0 312 124 1519 123 20 0 chr17 3846034 3846238 -81592242 + AluSg/x SINE Alu 83 290 -20 319 271 98 53 chr17 3846238 3846371 -81592109 - L1M4 LINE L1 -3652 2494 2356 269 143 0 32 chr17 3846573 3846636 -81591844 + (TTTC)n Simple_repeat Simple_repeat 1 61 0 646 186 9 0 chr17 3846651 3846944 -81591536 - FLAM_A SINE Alu 0 294 1 236 304 98 64 chr17 3847161 3847457 -81591023 + L2 LINE L2 2966 3271 -1 1657 222 19 91 chr17 3847484 3847557 -81590923 - L2 LINE L2 0 3313 3236 2127 113 0 3 chr17 3847557 3847860 -81590620 + AluSx SINE Alu 1 302 0 1657 222 19 91 chr17 3847860 3848388 -81590092 - L2 LINE L2 -77 3236 2758 741 317 94 39 chr17 3848601 3848964 -81589516 + L2 LINE L2 558 962 -2352 2303 95 0 13 chr17 3848964 3849268 -81589212 - AluSc SINE Alu -9 300 1 741 317 94 39 chr17 3849268 3849446 -81589034 + L2 LINE L2 962 1129 -2185 612 324 76 42 chr17 3849471 3849620 -81588860 - L2 LINE L2 0 3313 3171 1924 116 98 0 chr17 3849620 3849897 -81588583 + AluSx SINE Alu 1 304 -8 612 324 76 42 chr17 3849897 3849918 -81588562 - L2 LINE L2 -142 3171 3152 1640 191 0 23 chr17 3849918 3850053 -81588427 + AluJb SINE Alu 4 141 -171 2373 97 0 0 chr17 3850053 3850353 -81588127 + AluSq SINE Alu 3 302 -11 1640 191 0 23 chr17 3850353 3850520 -81587960 + AluJb SINE Alu 141 299 -13 612 324 76 42 chr17 3850520 3850728 -81587752 - L2 LINE L2 -161 3152 2921 696 162 0 0 chr17 3850786 3850891 -81587589 + FLAM_C SINE Alu 5 109 -34 51 0 0 0 chr17 3850934 3850985 -81587495 + AT_rich Low_complexity Low_complexity 1 51 0 599 329 63 77 chr17 3850988 3851170 -81587310 - L2 LINE L2 -416 2898 2715 2216 128 0 3 chr17 3851170 3851474 -81587006 - AluSx SINE Alu -5 307 5 599 329 63 77 chr17 3851474 3851486 -81586994 - L2 LINE L2 -599 2715 2704 2001 68 89 48 chr17 3851486 3851779 -81586701 - AluY SINE Alu -6 305 1 2033 129 31 0 chr17 3851780 3852066 -81586414 - AluSc SINE Alu -14 295 1 599 329 63 77 chr17 3852066 3852114 -81586366 - L2 LINE L2 -610 2704 2657 937 118 0 22 chr17 3852114 3852250 -81586230 + FLAM_C SINE Alu 1 133 0 599 329 63 77 chr17 3852250 3852683 -81585797 - L2 LINE L2 -657 2657 2228 1255 155 4 52 chr17 3852738 3852970 -81585510 + AluJo SINE Alu 86 306 -6 2238 125 3 0 chr17 3852972 3853283 -81585197 + AluSx SINE Alu 1 312 0 2454 90 0 0 chr17 3853286 3853598 -81584882 + AluSx SINE Alu 1 312 0 830 318 48 3 chr17 3853613 3853946 -81584534 - L2 LINE L2 -1161 2153 1806 1435 285 95 36 chr17 3853959 3854644 -81583836 - L2 LINE L2 -2066 1248 524 1913 126 48 3 chr17 3854647 3854940 -81583540 + AluSx SINE Alu 1 306 -6 402 217 12 0 chr17 3854945 3855028 -81583452 - BC200 scRNA scRNA -114 86 3 452 120 0 0 chr17 3855036 3855111 -81583369 - Alu SINE Alu -3 309 235 322 158 18 0 chr17 3855211 3855268 -81583212 + AluSp SINE Alu 125 182 -121 804 209 19 0 chr17 3855281 3855439 -81583041 - AluJo/FRAM SINE Alu -5 297 137 1305 172 32 48 chr17 3855442 3855692 -81582788 - AluJb SINE Alu -19 293 48 1187 147 0 0 chr17 3856407 3856577 -81581903 + AluSg/x SINE Alu 137 306 -6 2164 76 10 53 chr17 3856580 3856884 -81581596 + AluSc SINE Alu 1 291 -18 189 0 0 0 chr17 3856904 3856925 -81581555 + (TG)n Simple_repeat Simple_repeat 2 22 0 2250 96 0 17 chr17 3857127 3857451 -81581029 - AluY SINE Alu 0 311 1 1060 104 7 0 chr17 3857451 3857595 -81580885 - AluSq/x SINE Alu -167 145 1 909 192 0 0 chr17 3857994 3858150 -81580330 + FRAM SINE Alu 1 156 -20 759 113 96 0 chr17 3858287 3858402 -81580078 - AluSq/x SINE Alu -186 127 2 475 209 55 0 chr17 3859086 3859196 -81579284 - L1MC3 LINE L1 0 7785 7670 1654 112 0 0 chr17 3859240 3859454 -81579026 - AluSg SINE Alu -81 229 16 184 100 0 0 chr17 3860272 3860302 -81578178 + L2 LINE L2 2759 2788 -526 2179 127 3 10 chr17 3860461 3860775 -81577705 - AluSx SINE Alu 0 312 1 1685 139 79 7 chr17 3860779 3861082 -81577398 + Tigger1 DNA MER2_type 182 506 -1912 1143 157 0 0 chr17 3861103 3861269 -81577211 + FRAM SINE Alu 1 158 -18 2857 16 0 0 chr17 3861271 3861579 -81576901 + AluYa5 SINE Alu 1 308 -3 2082 148 3 0 chr17 3861581 3861885 -81576595 + AluSg SINE Alu 1 305 -5 1120 75 0 0 chr17 3861906 3862040 -81576440 + AluSg SINE Alu 1 134 -176 1971 109 4 0 chr17 3862040 3862297 -81576183 + AluSg SINE Alu 1 258 -52 2486 62 7 3 chr17 3862563 3862869 -81575611 + AluY SINE Alu 3 309 -2 1369 124 0 0 chr17 3862869 3863062 -81575418 + AluSg SINE Alu 118 310 0 1247 139 6 0 chr17 3863089 3863262 -81575218 + AluSg SINE Alu 6 179 -131 2005 126 0 0 chr17 3863398 3863668 -81574812 + AluSq SINE Alu 27 296 -17 391 273 70 98 chr17 3863671 3864034 -81574446 - L1MC4 LINE L1 -153 6703 5665 208 257 29 0 chr17 3864579 3864649 -81573831 + GA-rich Low_complexity Low_complexity 1 72 0 1194 122 74 0 chr17 3865271 3865439 -81573041 - AluSp SINE Alu 0 313 126 1763 146 7 17 chr17 3865439 3865733 -81572747 - AluSx SINE Alu -21 291 1 1194 122 74 0 chr17 3865733 3865779 -81572701 - AluSp SINE Alu -187 126 85 958 180 23 6 chr17 3865801 3865839 -81572641 - AluJo SINE Alu -137 175 139 2539 67 0 0 chr17 3865839 3866136 -81572344 - AluSx SINE Alu -15 297 1 958 180 23 6 chr17 3866136 3866269 -81572211 - AluJo SINE Alu -173 139 1 1613 199 3 7 chr17 3866351 3866643 -81571837 + AluJo SINE Alu 16 306 -6 2061 104 0 17 chr17 3866647 3866983 -81571497 + AluSq SINE Alu 1 331 0 345 255 120 32 chr17 3867187 3867403 -81571077 + L1MCa LINE L1 2469 2703 -3723 689 161 36 0 chr17 3867422 3867534 -81570946 + FLAM_A SINE Alu 1 116 -17 317 205 12 36 chr17 3867619 3867702 -81570778 + L1M4 LINE L1 5192 5272 -874 1596 183 47 9 chr17 3867848 3868192 -81570288 - L1M4 LINE L1 -1895 4251 3895 1046 160 28 0 chr17 3868196 3868377 -81570103 - AluSg/x SINE Alu -5 305 120 367 220 0 55 chr17 3868378 3868469 -81570011 - L1M4 LINE L1 -2277 3869 3784 2374 107 0 3 chr17 3868471 3868780 -81569700 - AluSx SINE Alu -4 308 1 2282 116 3 0 chr17 3868791 3869094 -81569386 - AluSp SINE Alu -9 304 1 375 137 0 3 chr17 3869114 3869185 -81569295 + MLT1F LTR MaLR 481 591 -4 2312 113 0 10 chr17 3869866 3870175 -81568305 - AluSx SINE Alu -6 306 1 335 293 188 17 chr17 3870294 3870533 -81567947 - L2 LINE L2 -4 3268 2989 2529 62 0 0 chr17 3870815 3871107 -81567373 - AluY SINE Alu -19 292 1 2208 125 0 3 chr17 3871284 3871589 -81566891 - AluSx SINE Alu -2 310 7 1218 160 18 36 chr17 3871597 3871816 -81566664 - AluJo SINE Alu -1 311 97 2415 87 6 3 chr17 3871971 3872282 -81566198 - AluSx SINE Alu 0 312 1 613 257 11 0 chr17 3872361 3872536 -81565944 - MER104 DNA MER2_type -3 177 1 1089 249 113 32 chr17 3872597 3873135 -81565345 - HAL1b LINE L1 -728 620 39 2038 98 18 4 chr17 3873326 3873602 -81564878 + AluSx SINE Alu 20 299 -13 923 184 17 17 chr17 3873901 3874075 -81564405 + AluJo SINE Alu 121 294 -18 2269 101 7 0 chr17 3874315 3874611 -81563869 - AluY SINE Alu -13 298 1 1086 92 14 0 chr17 3874613 3874755 -81563725 - AluSq/x SINE Alu -169 144 1 252 294 160 50 chr17 3875091 3875210 -81563270 - L2 LINE L2 0 3272 3141 414 245 152 22 chr17 3875538 3875722 -81562758 - L2 LINE L2 -456 2858 2651 533 63 76 13 chr17 3876252 3876331 -81562149 - AluS SINE Alu -228 85 2 306 0 0 0 chr17 3876570 3876604 -81561876 + (CA)n Simple_repeat Simple_repeat 2 35 0 2173 116 0 56 chr17 3876679 3876998 -81561482 + AluSq SINE Alu 7 307 -6 381 222 46 52 chr17 3877198 3877213 -81561267 - Charlie2a DNA MER1_type -12 2850 2836 858 143 0 8 chr17 3877213 3877346 -81561134 - FLAM_C SINE Alu 0 133 2 381 222 46 52 chr17 3877346 3877483 -81560997 - Charlie2a DNA MER1_type -26 2836 2699 * 599 221 32 32 chr17 3877477 3877667 -81560813 - Charlie2a DNA MER1_type -1206 1656 1467 797 259 62 35 chr17 3877862 3878152 -81560328 - Charlie2a DNA MER1_type -2481 301 4 2472 80 0 6 chr17 3879162 3879475 -81559005 + AluSq SINE Alu 1 311 -2 234 62 0 0 chr17 3879615 3879647 -81558833 + (CA)n Simple_repeat Simple_repeat 1 32 0 321 259 129 17 chr17 3880216 3880332 -81558148 - MIR SINE MIR -90 172 44 2263 104 0 3 chr17 3880505 3880803 -81557677 + AluY SINE Alu 5 301 -10 34 24 0 0 chr17 3880878 3880919 -81557561 + AT_rich Low_complexity Low_complexity 1 41 0 1323 144 5 5 chr17 3881070 3881345 -81557135 + AluSx SINE Alu 1 211 -101 1797 156 32 3 chr17 3881347 3881630 -81556850 + AluSx SINE Alu 7 297 -15 408 288 18 9 chr17 3881630 3881741 -81556739 - MIR SINE MIR -131 131 20 781 206 0 0 chr17 3881759 3881885 -81556595 - FLAM_A SINE Alu -7 126 1 2272 182 42 24 chr17 3881897 3882191 -81556289 - L1MB5 LINE L1 0 6174 5866 2250 119 0 3 chr17 3882191 3882494 -81555986 - AluSx SINE Alu -10 302 1 2272 182 42 24 chr17 3882494 3882704 -81555776 - L1MB5 LINE L1 -308 5866 5661 1455 153 0 36 chr17 3882704 3882953 -81555527 - AluSx SINE Alu 0 310 71 * 2442 91 0 0 chr17 3882951 3883248 -81555232 - AluY SINE Alu -14 297 1 416 133 0 0 chr17 3883250 3883310 -81555170 - AluSx SINE Alu -232 80 21 2254 117 0 7 chr17 3883332 3883640 -81554840 - AluSg SINE Alu -4 306 1 1685 153 40 45 chr17 3883640 3883914 -81554566 - L1MB5 LINE L1 -513 5667 5394 2247 143 0 0 chr17 3883914 3884222 -81554258 - AluSg SINE Alu -2 308 1 1685 153 40 45 chr17 3884222 3884299 -81554181 - L1MB5 LINE L1 -786 5394 5318 1052 182 0 0 chr17 3884311 3884470 -81554010 - FRAM SINE Alu -17 159 1 1379 243 127 83 chr17 3884513 3884850 -81553630 - L1MC4 LINE L1 0 8042 7721 2471 90 0 10 chr17 3884850 3885162 -81553318 - AluSg SINE Alu -1 309 1 1379 243 127 83 chr17 3885162 3885209 -81553271 - L1MC4 LINE L1 -321 7721 7678 2345 102 3 0 chr17 3885209 3885504 -81552976 - AluSp SINE Alu -17 296 1 1379 243 127 83 chr17 3885504 3885627 -81552853 - L1MC4 LINE L1 -364 7678 7562 1756 137 10 73 chr17 3885627 3885940 -81552540 - AluJb SINE Alu -19 293 1 1379 243 127 83 chr17 3885940 3886234 -81552246 - L1MC4 LINE L1 -480 7562 7204 902 136 0 0 chr17 3887191 3887309 -81551171 + AluJo/FLAM SINE Alu 1 118 -194 2467 74 0 35 chr17 3887309 3887621 -81550859 - AluSx SINE Alu -11 301 1 2249 102 10 0 chr17 3887621 3887915 -81550565 - AluSx SINE Alu -15 297 1 24 0 0 0 chr17 3887928 3887952 -81550528 + AT_rich Low_complexity Low_complexity 1 24 0 662 192 172 0 chr17 3888068 3888219 -81550261 - MIR SINE MIR -69 193 17 2180 98 26 16 chr17 3888414 3888719 -81549761 - AluSx SINE Alu -1 311 4 2653 43 3 0 chr17 3888727 3889028 -81549452 - AluY SINE Alu -9 302 1 23 0 0 0 chr17 3889409 3889432 -81549048 + AT_rich Low_complexity Low_complexity 1 23 0 2004 134 10 0 chr17 3889560 3889850 -81548630 - AluSq SINE Alu -12 301 9 882 153 14 28 chr17 3889853 3889997 -81548483 - AluSg/x SINE Alu -46 266 125 1005 188 62 19 chr17 3890170 3890378 -81548102 - MER20 DNA MER1_type -2 217 1 1996 104 6 71 chr17 3890717 3891043 -81547437 - AluSx SINE Alu -7 305 1 263 222 19 0 chr17 3891091 3891145 -81547335 - MIR SINE MIR -8 254 200 2242 126 0 0 chr17 3891146 3891455 -81547025 - AluSx SINE Alu -3 309 1 2072 145 0 3 chr17 3891464 3891760 -81546720 - AluSx SINE Alu -17 295 1 2278 93 3 3 chr17 3891781 3892070 -81546410 - AluSp SINE Alu -24 289 1 2105 99 58 3 chr17 3892818 3893111 -81545369 - AluSc SINE Alu 0 309 1 2297 108 6 10 chr17 3893715 3894029 -81544451 - AluSp SINE Alu 0 313 1 767 237 53 4 chr17 3894035 3894263 -81544217 + L1MD2 LINE L1 5089 5327 -819 804 213 0 18 chr17 3894263 3894427 -81544053 + FRAM SINE Alu 1 154 -22 1224 178 19 16 chr17 3894427 3894685 -81543795 + L1MD2 LINE L1 5324 5582 -777 22 0 0 0 chr17 3894742 3894764 -81543716 + AT_rich Low_complexity Low_complexity 1 22 0 844 161 0 0 chr17 3894764 3894882 -81543598 - FLAM_C SINE Alu -25 118 1 506 68 0 0 chr17 3894884 3894957 -81543523 - AluSp/q SINE Alu -13 300 228 713 175 186 5 chr17 3894990 3895184 -81543296 + L1MD2 LINE L1 5920 6148 -211 1290 135 122 16 chr17 3895230 3895475 -81543005 - MER44D DNA MER2_type 0 605 280 425 168 22 29 chr17 3895480 3895582 -81542898 - MER44D DNA MER2_type -532 173 72 195 250 17 17 chr17 3895927 3895987 -81542493 + MIR SINE MIR 6 65 -197 2293 99 3 3 chr17 3895989 3896291 -81542189 - AluSq SINE Alu -11 302 1 1816 96 12 0 chr17 3896309 3896549 -81541931 + AluSp SINE Alu 54 296 -17 1400 184 52 42 chr17 3896598 3896907 -81541573 - AluJo SINE Alu 0 312 1 1852 110 43 7 chr17 3897142 3897443 -81541037 + THE1C LTR MaLR 63 374 -1 561 139 0 30 chr17 3897454 3897555 -81540925 - FLAM_C SINE Alu -6 137 40 207 0 0 0 chr17 3897581 3897604 -81540876 + (A)n Simple_repeat Simple_repeat 1 23 0 248 267 43 26 chr17 3897888 3898004 -81540476 - MIR SINE MIR -10 252 135 2858 237 112 60 chr17 3898020 3899033 -81539447 + L2 LINE L2 1466 2558 -756 1163 172 200 4 chr17 3899033 3899283 -81539197 + AluJo SINE Alu 1 299 -3 2858 237 112 60 chr17 3899283 3899527 -81538953 + L2 LINE L2 2558 2788 -526 215 235 24 24 chr17 3899558 3899643 -81538837 + L2 LINE L2 2887 2971 -301 306 268 104 45 chr17 3899655 3899875 -81538605 + L2 LINE L2 3081 3313 0 473 101 0 0 chr17 3899995 3900064 -81538416 + AluSq SINE Alu 2 70 -242 888 149 0 37 chr17 3900064 3900225 -81538255 + AluSp/q SINE Alu 159 313 0 1528 155 76 49 chr17 3900231 3900535 -81537945 + AluJo SINE Alu 1 312 0 239 30 0 0 chr17 3900836 3900869 -81537611 - L1PA16 LINE L1 -5 6161 6129 2525 80 0 3 chr17 3902070 3902381 -81536099 - AluSg SINE Alu 0 310 1 312 289 11 11 chr17 3902440 3902530 -81535950 - L2 LINE L2 -4 3268 3179 2408 81 0 35 chr17 3902746 3903056 -81535424 + AluSx SINE Alu 1 299 -13 2343 78 26 3 chr17 3903706 3904012 -81534468 - AluSq SINE Alu 0 313 1 328 380 0 0 chr17 3904277 3904406 -81534074 + MIR SINE MIR 21 149 -113 604 200 50 0 chr17 3904560 3904685 -81533795 + MER53 DNA DNA 2 139 -50 2012 132 4 0 chr17 3904685 3904991 -81533489 + AluSx SINE Alu 1 307 0 604 200 50 0 chr17 3904991 3905024 -81533456 + MER53 DNA DNA 139 169 -20 1359 168 0 42 chr17 3905024 3905262 -81533218 - AluJb SINE Alu -1 311 84 920 147 0 0 chr17 3905415 3905551 -81532929 + AluSg/x SINE Alu 174 309 -1 201 39 0 0 chr17 3905551 3905577 -81532903 + (GA)n Simple_repeat Simple_repeat 1 26 0 726 62 0 0 chr17 3905577 3905673 -81532807 + (GGAA)n Simple_repeat Simple_repeat 2 97 0 2050 134 3 13 chr17 3906684 3906982 -81531498 - AluSq SINE Alu -18 295 1 2070 105 14 27 chr17 3907029 3907346 -81531134 - AluSp SINE Alu 0 313 1 270 0 0 0 chr17 3907348 3907378 -81531102 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1804 83 9 0 chr17 3907378 3907607 -81530873 - AluSg1 SINE Alu -29 280 50 982 107 0 0 chr17 3907607 3907738 -81530742 - AluSq/x SINE Alu -178 135 5 1270 132 5 44 chr17 3907851 3908087 -81530393 - AluJb SINE Alu 0 312 85 659 255 25 45 chr17 3908101 3908301 -81530179 + L1MC4a LINE L1 5512 5707 -2101 2516 82 0 13 chr17 3908301 3908618 -81529862 - AluSp SINE Alu 0 313 1 873 58 0 0 chr17 3908629 3908732 -81529748 - AluY SINE Alu -23 288 186 379 230 168 16 chr17 3908732 3908923 -81529557 + L1MC4a LINE L1 5704 5923 -1885 1749 125 95 8 chr17 3908941 3909229 -81529251 + AluSg SINE Alu 1 310 0 1763 152 48 21 chr17 3909235 3909524 -81528956 + AluJb SINE Alu 1 297 -15 2452 82 0 0 chr17 3909530 3909824 -81528656 + AluSc SINE Alu 1 294 -15 198 0 0 0 chr17 3909836 3909858 -81528622 + (CA)n Simple_repeat Simple_repeat 2 23 0 282 303 33 33 chr17 3910135 3910257 -81528223 + MIR3 SINE MIR 73 194 -14 2351 89 7 10 chr17 3910301 3910605 -81527875 + AluSx SINE Alu 1 303 -9 2019 119 20 0 chr17 3910605 3910898 -81527582 + AluSx SINE Alu 1 300 -12 249 255 224 0 chr17 3911550 3911648 -81526832 + MIR3 SINE MIR 36 155 -53 221 246 0 18 chr17 3911637 3911694 -81526786 + MER5A DNA MER1_type 112 167 -22 * 2137 116 3 3 chr17 3911711 3912005 -81526475 - AluSx SINE Alu -18 294 1 279 219 0 0 chr17 3912212 3912253 -81526227 + A-rich Low_complexity Low_complexity 1 41 0 22 0 0 0 chr17 3912260 3912282 -81526198 + GC_rich Low_complexity Low_complexity 1 22 0 23 40 0 0 chr17 3912340 3912365 -81526115 + GC_rich Low_complexity Low_complexity 1 25 0 241 328 0 0 chr17 3912367 3912428 -81526052 + A-rich Low_complexity Low_complexity 1 61 0 2245 101 0 26 chr17 3912936 3913244 -81525236 - AluSx SINE Alu -12 300 1 2421 90 0 3 chr17 3914097 3914398 -81524082 - AluSq SINE Alu -13 300 1 319 273 159 8 chr17 3915011 3915143 -81523337 + MIR3 SINE MIR 37 163 -45 334 297 69 40 chr17 3915840 3916022 -81522458 + MIR3 SINE MIR 18 205 -31 216 300 142 17 chr17 3916335 3916455 -81522025 + L3 LINE CR1 1332 1466 -111 203 189 34 11 chr17 3917772 3917831 -81520649 + MIR SINE MIR 104 161 -101 195 302 47 0 chr17 3918242 3918348 -81520132 + MIR SINE MIR 23 133 -75 203 83 28 28 chr17 3918954 3918990 -81519490 + (TCC)n Simple_repeat Simple_repeat 3 38 0 458 203 30 0 chr17 3918991 3919124 -81519356 + CT-rich Low_complexity Low_complexity 2 138 0 1123 165 6 0 chr17 3919131 3919301 -81519179 - AluJb SINE Alu -7 305 135 224 30 30 0 chr17 3919302 3919335 -81519145 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 2009 125 0 41 chr17 3919335 3919630 -81518850 - AluSq SINE Alu -30 283 1 1555 89 0 15 chr17 3919960 3920162 -81518318 - AluSc SINE Alu 0 309 111 1980 129 0 37 chr17 3920384 3920701 -81517779 - AluSx SINE Alu 0 306 1 237 286 98 0 chr17 3920740 3920842 -81517638 + MIR SINE MIR 28 137 -71 1111 156 78 0 chr17 3920854 3921033 -81517447 - AluJo SINE Alu -47 265 73 304 308 108 8 chr17 3922130 3922168 -81516312 - MIR SINE MIR -110 152 119 1835 113 109 22 chr17 3922168 3922443 -81516037 + AluSg SINE Alu 1 299 -11 304 308 108 8 chr17 3922443 3922524 -81515956 - MIR SINE MIR -143 119 21 183 239 0 0 chr17 3922608 3922654 -81515826 - MIR SINE MIR -112 150 105 236 309 57 16 chr17 3922777 3922900 -81515580 + L2 LINE L2 2923 3050 -222 2462 77 0 26 chr17 3923413 3923724 -81514756 - AluSg SINE Alu -7 303 1 2381 92 0 0 chr17 3923724 3924016 -81514464 - AluSx SINE Alu -20 292 1 270 155 48 95 chr17 3924781 3924834 -81513646 - FLAM SINE Alu -179 123 84 1580 141 0 0 chr17 3924834 3925054 -81513426 - AluJo SINE Alu -92 220 1 270 155 48 95 chr17 3925054 3925084 -81513396 - FLAM SINE Alu -218 84 54 1078 130 59 18 chr17 3925309 3925498 -81512982 - AluSg/x SINE Alu 0 312 121 2384 113 0 0 chr17 3925507 3925818 -81512662 - AluSx SINE Alu -1 311 1 1973 169 0 0 chr17 3925913 3926214 -81512266 + AluJo SINE Alu 1 301 -11 216 0 0 0 chr17 3927566 3927590 -81510890 + (TCCA)n Simple_repeat Simple_repeat 2 25 0 2228 103 7 0 chr17 3927812 3928122 -81510358 + AluSx SINE Alu 1 312 0 2057 116 10 42 chr17 3928141 3928452 -81510028 + AluSx SINE Alu 1 301 -11 204 250 36 27 chr17 3928458 3928570 -81509910 + (TATATG)n Simple_repeat Simple_repeat 4 116 0 290 250 50 0 chr17 3929251 3929331 -81509149 + MIR SINE MIR 82 165 -97 2426 85 3 3 chr17 3929369 3929676 -81508804 - AluSq SINE Alu -6 307 1 1088 248 131 65 chr17 3929681 3930141 -81508339 - MLT1G1 LTR MaLR 0 595 90 1788 172 3 3 chr17 3930141 3930437 -81508043 + AluSx SINE Alu 1 296 -16 1088 248 131 65 chr17 3930437 3930532 -81507948 - MLT1G1 LTR MaLR -505 90 3 801 247 128 45 chr17 3930821 3930955 -81507525 - L2 LINE L2 -1 3312 3191 2400 101 0 0 chr17 3930955 3931252 -81507228 + AluSg SINE Alu 1 297 -13 2213 106 3 10 chr17 3931253 3931555 -81506925 + AluSx SINE Alu 1 300 -12 801 247 128 45 chr17 3931555 3931975 -81506505 - L2 LINE L2 -121 3192 2708 441 293 105 38 chr17 3931980 3932352 -81506128 - MLT1H LTR MaLR 0 549 153 1916 119 10 17 chr17 3932369 3932664 -81505816 - AluSx SINE Alu -19 293 1 249 273 0 91 chr17 3932664 3932785 -81505695 - MLT1H LTR MaLR -419 123 14 1432 195 18 131 chr17 3932798 3932852 -81505628 - L2 LINE L2 -607 2707 2649 617 184 22 44 chr17 3932852 3932988 -81505492 + FLAM_C SINE Alu 1 133 0 1432 195 18 131 chr17 3932988 3933385 -81505095 - L2 LINE L2 -665 2649 2307 850 63 16 8 chr17 3933390 3933516 -81504964 + (TTTC)n Simple_repeat Simple_repeat 2 128 0 2015 96 7 4 chr17 3933517 3933797 -81504683 - AluSq SINE Alu -32 281 1 1902 134 0 7 chr17 3933806 3934096 -81504384 - AluJb SINE Alu -24 288 1 1429 127 0 9 chr17 3934138 3934351 -81504129 + AluSg/x SINE Alu 93 303 -9 388 141 343 20 chr17 3934351 3934450 -81504030 - L2 LINE L2 -1020 2294 2164 1009 132 18 150 chr17 3934817 3934859 -81503621 - L1MB8 LINE L1 0 6184 6138 2115 105 3 0 chr17 3934859 3935145 -81503335 + AluSx SINE Alu 3 289 -23 1009 132 18 150 chr17 3935145 3935428 -81503052 - L1MB8 LINE L1 -46 6138 5902 751 248 34 41 chr17 3935504 3935635 -81502845 - HAL1b LINE L1 -451 897 767 2228 106 3 0 chr17 3935635 3935936 -81502544 - AluSp SINE Alu -11 302 1 751 248 34 41 chr17 3935936 3936099 -81502381 - HAL1b LINE L1 -581 767 605 2101 141 0 0 chr17 3936166 3936478 -81502002 - AluJb SINE Alu 0 312 1 2269 87 3 3 chr17 3936573 3936871 -81501609 - AluSx SINE Alu -14 298 1 180 111 0 0 chr17 3936894 3936921 -81501559 + (TTCC)n Simple_repeat Simple_repeat 3 29 0 1914 148 19 16 chr17 3937489 3937800 -81500680 - AluJb SINE Alu 0 312 1 1900 122 37 10 chr17 3938103 3938399 -81500081 - AluSq SINE Alu -9 304 1 229 351 0 6 chr17 3939629 3939803 -81498677 + (TG)n Simple_repeat Simple_repeat 1 173 0 253 354 54 0 chr17 3940647 3940777 -81497703 - MIR3 SINE MIR -9 199 63 2313 95 0 9 chr17 3942666 3942981 -81495499 - AluSx SINE Alu 0 312 1 424 293 38 15 chr17 3943506 3943639 -81494841 - MIR SINE MIR -38 170 35 2214 92 7 0 chr17 3943656 3943950 -81494530 - AluSq SINE Alu -17 296 1 700 269 23 0 chr17 3944429 3944604 -81493876 + MIR SINE MIR 23 201 -61 212 254 18 0 chr17 3944746 3944801 -81493679 - L3 LINE CR1 -102 1475 1420 255 250 157 0 chr17 3944941 3945051 -81493429 + MIR SINE MIR 38 172 -63 264 204 0 0 chr17 3945239 3945293 -81493187 - L3 LINE CR1 -291 1286 1233 339 282 183 12 chr17 3945710 3946033 -81492447 - L2 LINE L2 -1437 1877 1500 494 261 17 52 chr17 3946301 3946511 -81491969 + MIR SINE MIR 5 203 -59 2332 91 3 0 chr17 3946585 3946892 -81491588 - AluSc SINE Alu -1 308 1 197 307 85 53 chr17 3946930 3946977 -81491503 - L3 LINE CR1 -3 1574 1530 581 256 26 37 chr17 3946977 3947168 -81491312 - MER5A DNA MER1_type 0 189 1 197 307 85 53 chr17 3947168 3947309 -81491171 - L3 LINE CR1 -47 1530 1380 576 282 164 14 chr17 3948796 3949016 -81489464 + MIR SINE MIR 2 254 -8 2187 127 0 0 chr17 3949019 3949327 -81489153 - AluSx SINE Alu -4 308 1 279 294 104 31 chr17 3949712 3949875 -81488605 - L2 LINE L2 -172 3100 2926 497 313 38 0 chr17 3949954 3950091 -81488389 - MIR SINE MIR -89 173 28 2313 90 6 0 chr17 3950091 3950402 -81488078 - AluSq SINE Alu 0 313 1 497 313 38 0 chr17 3950402 3950424 -81488056 - MIR SINE MIR -234 28 8 1420 267 91 9 chr17 3951383 3951598 -81486882 - L2 LINE L2 -1 3312 3116 2286 87 13 0 chr17 3951598 3951898 -81486582 + AluSg SINE Alu 1 304 -6 1420 267 91 9 chr17 3951898 3952435 -81486045 - L2 LINE L2 -197 3116 2500 2222 103 10 0 chr17 3953134 3953435 -81485045 - AluSq SINE Alu -9 304 1 1740 162 7 23 chr17 3954437 3954746 -81483734 + AluSx SINE Alu 1 304 -8 2263 75 17 0 chr17 3955836 3956129 -81482351 - AluSp SINE Alu -15 298 1 917 139 0 7 chr17 3956130 3956267 -81482213 - AluSq/x SINE Alu -177 136 1 252 314 25 16 chr17 3956550 3956671 -81481809 - LTR67 LTR ERVL -2 555 434 2198 112 26 0 chr17 3956915 3957220 -81481260 + AluSp SINE Alu 1 313 0 214 365 52 26 chr17 3957265 3957380 -81481100 + MIR3 SINE MIR 89 206 -2 450 253 106 88 chr17 3957812 3958085 -81480395 - L2 LINE L2 0 3272 2995 2322 64 0 10 chr17 3958413 3958708 -81479772 - AluY SINE Alu -19 292 1 199 211 0 0 chr17 3959616 3959654 -81478826 - MIR SINE MIR -62 146 109 358 252 17 50 chr17 3960051 3960170 -81478310 - MIR SINE MIR -64 144 30 21 36 0 0 chr17 3960998 3961026 -81477454 + GC_rich Low_complexity Low_complexity 1 28 0 304 183 25 33 chr17 3961174 3961294 -81477186 + (CCG)n Simple_repeat Simple_repeat 1 119 0 34 0 0 0 chr17 3961328 3961362 -81477118 + GC_rich Low_complexity Low_complexity 1 34 0 331 303 38 23 chr17 3962233 3962365 -81476115 + MIR3 SINE MIR 23 156 -52 266 385 96 0 chr17 3962587 3962722 -81475758 - MIR3 SINE MIR -13 195 48 494 278 14 4 chr17 3963706 3963862 -81474618 - MIR3 SINE MIR -61 147 3 2388 84 3 0 chr17 3963979 3964289 -81474191 + AluSx SINE Alu 1 311 -1 435 268 43 0 chr17 3964378 3964516 -81473964 + MER103 DNA DNA 21 164 -2 625 175 0 58 chr17 3964710 3964830 -81473650 - AluJo SINE Alu -11 301 189 1975 110 40 0 chr17 3964849 3965121 -81473359 + AluSx SINE Alu 2 284 -28 262 204 0 0 chr17 3965213 3965267 -81473213 + AluJ/monomer SINE Alu 248 301 -1 21 36 0 0 chr17 3965267 3965295 -81473185 + AT_rich Low_complexity Low_complexity 1 28 0 931 169 42 0 chr17 3965324 3965490 -81472990 - AluJo SINE Alu -125 187 15 495 350 104 30 chr17 3965506 3965929 -81472551 + L2 LINE L2 2195 2668 -646 2304 93 0 3 chr17 3965929 3966231 -81472249 - AluSx SINE Alu -11 301 1 495 350 104 30 chr17 3966231 3966347 -81472133 + L2 LINE L2 2668 2774 -540 906 71 0 0 chr17 3966362 3966475 -81472005 + AluSc SINE Alu 1 113 -196 4588 56 15 7 chr17 3966586 3967306 -81471174 + SVA Other Other 316 1157 -229 1061 117 111 6 chr17 3967331 3967502 -81470978 + AluSg/x SINE Alu 102 290 -20 887 299 95 50 chr17 3969991 3970436 -81468044 + HAL1 LINE L1 1060 1558 -949 1806 169 0 0 chr17 3970436 3970731 -81467749 - AluJo SINE Alu -13 299 5 887 299 95 50 chr17 3970731 3971073 -81467407 + HAL1 LINE L1 1558 1883 -624 21 0 0 0 chr17 3971121 3971142 -81467338 + AT_rich Low_complexity Low_complexity 1 21 0 2309 66 7 0 chr17 3971149 3971438 -81467042 + AluY SINE Alu 1 291 -20 200 136 0 68 chr17 3971576 3971620 -81466860 + (TTTTTG)n Simple_repeat Simple_repeat 1 41 0 2065 67 32 21 chr17 3971856 3972141 -81466339 + AluSp SINE Alu 1 288 -25 762 80 0 0 chr17 3972250 3972350 -81466130 + AluSg/x SINE Alu 196 295 -15 2242 102 3 3 chr17 3972482 3972795 -81465685 + AluSp SINE Alu 1 313 0 1975 131 7 0 chr17 3972801 3973091 -81465389 + AluSx SINE Alu 1 292 -20 3945 128 134 43 chr17 3973230 3974641 -81463839 - pTR5 LTR ERV1 0 2438 742 542 189 23 23 chr17 3974708 3974840 -81463640 - LTR45 LTR ERV1 0 525 394 2248 41 24 10 chr17 3974880 3975173 -81463307 + AluY SINE Alu 1 297 -14 2196 240 121 40 chr17 3975528 3975721 -81462759 + HAL1 LINE L1 261 437 -2070 2196 86 0 0 chr17 3975721 3976028 -81462452 + AluSg SINE Alu 1 307 0 2196 240 121 40 chr17 3976028 3976944 -81461536 + HAL1 LINE L1 437 1460 -1047 24 0 0 0 chr17 3976944 3976968 -81461512 + AT_rich Low_complexity Low_complexity 1 24 0 32 0 0 0 chr17 3977173 3977205 -81461275 + AT_rich Low_complexity Low_complexity 1 32 0 1331 34 0 53 chr17 3977844 3978053 -81460427 - SVA Other Other -1188 198 1 2296 94 0 7 chr17 3978090 3978399 -81460081 - AluSx SINE Alu -5 307 1 2130 119 0 34 chr17 3979718 3980038 -81458442 - AluSx SINE Alu -3 309 1 271 287 104 9 chr17 3980045 3980160 -81458320 + L2 LINE L2 2400 2525 -789 212 355 86 0 chr17 3980190 3980283 -81458197 - L2 LINE L2 -4 3309 3209 405 0 0 0 chr17 3980308 3980353 -81458127 + (TG)n Simple_repeat Simple_repeat 1 45 0 183 287 73 45 chr17 3980528 3980775 -81457705 - L2 LINE L2 -1040 2274 2021 322 237 29 58 chr17 3980911 3981050 -81457430 + MIR3 SINE MIR 1 135 -73 25 65 0 0 chr17 3983421 3983467 -81455013 + GC_rich Low_complexity Low_complexity 1 46 0 21 0 0 0 chr17 3983877 3983898 -81454582 + GC_rich Low_complexity Low_complexity 1 21 0 258 32 0 0 chr17 3985483 3985514 -81452966 + (GA)n Simple_repeat Simple_repeat 2 32 0 239 338 64 39 chr17 3985814 3986048 -81452432 - L2 LINE L2 -905 2409 2170 245 340 32 53 chr17 3987760 3987948 -81450532 + MIR3 SINE MIR 5 188 -20 218 284 154 79 chr17 3988724 3988925 -81449555 + L2 LINE L2 1796 1981 -1333 2441 87 0 0 chr17 3988925 3989237 -81449243 - AluSx SINE Alu 0 312 1 218 284 154 79 chr17 3989237 3989595 -81448885 + L2 LINE L2 1980 2397 -917 242 388 165 0 chr17 3989967 3990173 -81448307 + L2 LINE L2 2938 3177 -95 240 357 29 53 chr17 3990424 3990595 -81447885 + MIR SINE MIR 74 240 -22 278 270 79 53 chr17 3990604 3990756 -81447724 - MIR3 SINE MIR -50 158 3 244 236 0 42 chr17 3991593 3991665 -81446815 + L3 LINE CR1 1401 1469 -108 182 189 0 0 chr17 3991765 3991802 -81446678 - L2 LINE L2 -208 3064 3028 2079 112 0 3 chr17 3993137 3993471 -81445009 + AluSx SINE Alu 1 333 0 275 239 147 91 chr17 3995207 3995492 -81442988 - L2 LINE L2 -22 3250 2950 360 256 103 0 chr17 3996400 3996517 -81441963 - MIR3 SINE MIR -22 186 58 330 260 30 0 chr17 3996923 3997023 -81441457 - LTR33 LTR ERVL -2 519 417 448 304 131 0 chr17 3997097 3997311 -81441169 - LTR33 LTR ERVL -239 282 41 2022 128 3 3 chr17 3997512 3997810 -81440670 + AluSx SINE Alu 1 298 -14 251 197 0 45 chr17 3997879 3997945 -81440535 + (CCCCAG)n Simple_repeat Simple_repeat 2 64 0 1701 181 0 20 chr17 4000097 4000396 -81438084 + AluJb SINE Alu 1 293 -19 244 281 25 8 chr17 4000401 4000478 -81438002 + HAL1b LINE L1 1226 1300 -48 291 28 0 0 chr17 4000478 4000514 -81437966 + (ATTG)n Simple_repeat Simple_repeat 4 39 0 1800 153 14 0 chr17 4000515 4000790 -81437690 - AluJo SINE Alu -33 279 1 244 281 25 8 chr17 4000790 4000831 -81437649 + HAL1b LINE L1 1299 1348 0 553 155 124 72 chr17 4000995 4001189 -81437291 - MER46A DNA MER2_type -1 235 32 2415 87 0 0 chr17 4001282 4001593 -81436887 - AluSq SINE Alu -2 311 1 658 51 0 0 chr17 4001593 4001672 -81436808 - AluSq/x SINE Alu -177 135 57 527 354 134 29 chr17 4002084 4002561 -81435919 + L3 LINE CR1 1001 1527 -50 2298 119 0 0 chr17 4002804 4003115 -81435365 - AluSx SINE Alu -1 311 1 2197 101 7 0 chr17 4003644 4003941 -81434539 - AluSx SINE Alu -13 299 1 2007 134 7 3 chr17 4004125 4004431 -81434049 - AluJb SINE Alu -5 307 1 548 314 105 0 chr17 4004439 4004630 -81433850 - MIR SINE MIR -10 252 42 2294 80 3 13 chr17 4005092 4005392 -81433088 - AluSx SINE Alu -15 297 1 1387 180 3 42 chr17 4005574 4005697 -81432783 + AluJo SINE Alu 21 147 -165 2281 86 0 19 chr17 4005697 4006011 -81432469 + AluSq SINE Alu 1 308 -5 1387 180 3 42 chr17 4006011 4006171 -81432309 + AluJo SINE Alu 147 293 -19 1521 194 33 0 chr17 4009479 4009778 -81428702 + AluJb SINE Alu 1 308 0 2365 85 0 0 chr17 4010090 4010397 -81428083 - AluSx SINE Alu -5 307 1 611 68 0 0 chr17 4010668 4010742 -81427738 + AluSp/q SINE Alu 216 289 -24 2117 102 0 32 chr17 4010752 4011067 -81427413 + AluY SINE Alu 1 305 -6 343 276 95 9 chr17 4011096 4011306 -81427174 - L1MC4a LINE L1 -1555 6253 6026 2226 91 44 0 chr17 4011388 4011685 -81426795 - AluSq SINE Alu -3 310 1 611 68 0 0 chr17 4011695 4011769 -81426711 - AluSp/q SINE Alu -24 289 216 868 126 47 126 chr17 4012448 4012614 -81425866 - Charlie5 DNA MER1_type 0 2585 2448 2245 83 3 17 chr17 4012614 4012916 -81425564 + AluSx SINE Alu 1 298 -14 868 126 47 126 chr17 4012916 4013026 -81425454 - Charlie5 DNA MER1_type -137 2448 2331 275 357 170 6 chr17 4013079 4013261 -81425219 + MIR SINE MIR 45 256 -6 205 282 103 0 chr17 4013618 4013696 -81424784 - MIR SINE MIR -62 146 61 199 250 225 15 chr17 4014518 4014643 -81423837 - MIR SINE MIR -68 140 19 180 345 58 23 chr17 4015533 4015620 -81422860 + L2 LINE L2 2987 3076 -196 1051 216 11 42 chr17 4017939 4018203 -81420277 - MIR SINE MIR 0 262 7 345 294 43 49 chr17 4018826 4018989 -81419491 + MER5A DNA MER1_type 24 185 -4 208 306 69 0 chr17 4018980 4019052 -81419428 - MIR3 SINE MIR -39 169 93 * 1027 166 0 0 chr17 4019811 4019974 -81418506 + AluJb SINE Alu 134 296 -16 216 365 78 17 chr17 4019983 4020213 -81418267 - L2 LINE L2 -1544 1770 1527 195 222 37 19 chr17 4020944 4020998 -81417482 - L2 LINE L2 -212 3060 3006 307 310 77 36 chr17 4021389 4021558 -81416922 + MIR3 SINE MIR 3 183 -63 230 337 12 0 chr17 4021767 4021850 -81416630 - L2 LINE L2 -213 3059 2976 384 282 46 23 chr17 4022460 4022591 -81415889 + MIR SINE MIR 66 199 -63 357 281 0 0 chr17 4023152 4023287 -81415193 + (TG)n Simple_repeat Simple_repeat 1 135 0 294 414 37 0 chr17 4025762 4025924 -81412556 - MIR SINE MIR -59 203 36 2339 99 0 3 chr17 4026551 4026864 -81411616 + AluSx SINE Alu 1 312 0 370 325 20 54 chr17 4026982 4027185 -81411295 - L2 LINE L2 -85 3187 2992 227 222 22 74 chr17 4027239 4027374 -81411106 + L1MEd LINE L1 73 200 -5919 295 178 22 44 chr17 4027444 4027534 -81410946 - L1MC5 LINE L1 -35 7926 7839 783 304 66 68 chr17 4027767 4027896 -81410584 + L1MEd LINE L1 583 711 -5408 2173 86 10 3 chr17 4027896 4028188 -81410292 + AluSq SINE Alu 1 294 -19 783 304 66 68 chr17 4028188 4028544 -81409936 + L1MEd LINE L1 711 1067 -5052 188 391 30 17 chr17 4028610 4028763 -81409717 - L2 LINE L2 -455 2859 2701 2539 52 3 0 chr17 4028763 4029073 -81409407 + AluY SINE Alu 1 311 0 188 391 30 17 chr17 4029073 4029149 -81409331 - L2 LINE L2 -613 2701 2627 322 263 30 20 chr17 4030586 4030685 -81407795 + MIR3 SINE MIR 56 155 -53 428 230 135 32 chr17 4031243 4031369 -81407111 + MIR SINE MIR 13 151 -111 247 375 0 0 chr17 4031552 4031656 -81406824 + L2 LINE L2 2988 3091 -181 460 306 61 25 chr17 4031970 4032078 -81406402 - MIR SINE MIR -24 238 118 1874 207 39 42 chr17 4032078 4032437 -81406043 - MER63B DNA MER1_type -629 433 74 2175 105 0 0 chr17 4032437 4032733 -81405747 + AluSx SINE Alu 1 296 -16 1874 207 39 42 chr17 4032733 4032807 -81405673 - MER63B DNA MER1_type -988 74 1 460 306 61 25 chr17 4032807 4032894 -81405586 - MIR SINE MIR -144 118 36 227 191 32 32 chr17 4033056 4033119 -81405361 + CT-rich Low_complexity Low_complexity 1 63 0 937 275 53 77 chr17 4033419 4033677 -81404803 + L2 LINE L2 2702 2964 -349 2053 107 3 10 chr17 4033677 4033975 -81404505 + AluSx SINE Alu 1 296 -16 937 275 53 77 chr17 4033975 4034006 -81404474 + L2 LINE L2 2964 2994 -319 1751 111 96 4 chr17 4034006 4034276 -81404204 + AluSx SINE Alu 1 295 -17 937 275 53 77 chr17 4034276 4034530 -81403950 + L2 LINE L2 2994 3307 -6 381 257 62 9 chr17 4034617 4034730 -81403750 + MIR SINE MIR 30 148 -60 505 272 26 101 chr17 4034732 4034923 -81403557 + MIR SINE MIR 2 169 -93 2067 127 3 0 chr17 4034923 4035222 -81403258 + AluSx SINE Alu 1 300 -12 505 272 26 101 chr17 4035222 4035298 -81403182 + MIR SINE MIR 169 249 -13 440 258 8 32 chr17 4035980 4036104 -81402376 + MIR3 SINE MIR 7 127 -81 559 243 111 17 chr17 4036203 4036384 -81402096 + MIR SINE MIR 46 243 -19 354 265 39 10 chr17 4036409 4036511 -81401969 + L3 LINE CR1 1399 1503 -74 191 111 44 0 chr17 4036692 4036737 -81401743 - L2 LINE L2 -212 3060 3014 2293 109 0 0 chr17 4036841 4037153 -81401327 + AluSq SINE Alu 1 312 -1 181 352 48 8 chr17 4037174 4037299 -81401181 - L2 LINE L2 -481 2833 2704 1205 273 77 37 chr17 4038024 4038544 -81399936 + L1ME2 LINE L1 5247 5802 -362 2239 100 0 0 chr17 4038544 4038843 -81399637 - AluSq SINE Alu -14 299 1 1205 273 77 37 chr17 4038843 4038940 -81399540 + L1ME2 LINE L1 5802 5894 -270 1991 102 3 56 chr17 4038975 4039298 -81399182 - AluSq SINE Alu -7 306 1 1551 179 3 14 chr17 4039307 4039450 -81399030 - AluJo SINE Alu -25 287 144 2278 99 0 0 chr17 4039450 4039754 -81398726 - AluSg1 SINE Alu -5 304 1 1551 179 3 14 chr17 4039754 4039900 -81398580 - AluJo SINE Alu -168 144 1 1859 112 63 0 chr17 4039929 4040214 -81398266 + AluSg SINE Alu 1 303 -7 520 189 24 0 chr17 4042610 4042737 -81395743 + (TCCA)n Simple_repeat Simple_repeat 3 132 0 258 250 21 31 chr17 4047198 4047294 -81391186 + CT-rich Low_complexity Low_complexity 5 99 0 203 152 87 0 chr17 4048277 4048323 -81390157 + MIR SINE MIR 68 117 -91 1712 136 19 30 chr17 4049289 4049326 -81389154 + LTR47A LTR ERVL 13 49 -403 2050 99 3 65 chr17 4049326 4049648 -81388832 - AluSx SINE Alu -10 302 1 1712 136 19 30 chr17 4049648 4050005 -81388475 + LTR47A LTR ERVL 49 452 0 2118 120 0 13 chr17 4050026 4050342 -81388138 - AluSx SINE Alu 0 312 1 1745 221 85 38 chr17 4050351 4050961 -81387519 - L1M4 LINE L1 -892 5254 4616 1931 148 3 0 chr17 4050990 4051288 -81387192 + AluSx SINE Alu 1 299 -13 261 0 0 0 chr17 4051321 4051350 -81387130 + (TA)n Simple_repeat Simple_repeat 2 30 0 2334 79 0 7 chr17 4051350 4051653 -81386827 - AluSc SINE Alu -8 301 1 705 215 77 127 chr17 4051653 4052058 -81386422 + MLT1G3 LTR MaLR 106 595 0 2056 108 0 26 chr17 4052135 4052440 -81386040 + AluSx SINE Alu 1 297 -15 1828 80 0 4 chr17 4052572 4052811 -81385669 + AluY SINE Alu 1 238 -73 234 0 0 0 chr17 4052814 4052840 -81385640 + (A)n Simple_repeat Simple_repeat 1 26 0 322 73 18 18 chr17 4053561 4053616 -81384864 + (TG)n Simple_repeat Simple_repeat 2 56 0 2078 111 10 3 chr17 4053966 4054264 -81384216 + AluSx SINE Alu 1 300 -12 2412 81 0 0 chr17 4054650 4054957 -81383523 - AluSx SINE Alu -5 307 1 945 304 84 35 chr17 4054957 4055471 -81383009 - L1MC4a LINE L1 -977 6831 6293 2182 99 0 3 chr17 4055473 4055767 -81382713 + AluSx SINE Alu 1 293 -19 790 270 43 13 chr17 4055770 4056003 -81382477 - L1MC4a LINE L1 -2001 5807 5568 568 212 150 16 chr17 4056006 4056199 -81382281 - L1MC4a LINE L1 -2258 5550 5332 2230 97 0 22 chr17 4056202 4056522 -81381958 - AluSp SINE Alu 0 313 1 204 125 0 0 chr17 4056544 4056576 -81381904 + (TG)n Simple_repeat Simple_repeat 2 33 0 1894 120 11 4 chr17 4056576 4056852 -81381628 - AluSx SINE Alu -34 278 1 1879 160 3 13 chr17 4056883 4057190 -81381290 + AluJb SINE Alu 1 304 -8 452 313 28 17 chr17 4057208 4057387 -81381093 + L2 LINE L2 2550 2730 -584 741 193 7 0 chr17 4057456 4057596 -81380884 - LTR64 LTR ERVK -415 143 3 214 254 73 0 chr17 4057702 4057757 -81380723 + L2 LINE L2 3148 3206 -66 2361 58 3 26 chr17 4057778 4058089 -81380391 - AluY SINE Alu -7 304 1 2072 106 3 7 chr17 4059985 4060288 -81378192 + AluSq SINE Alu 1 302 -11 24 32 0 0 chr17 4060312 4060343 -81378137 + AT_rich Low_complexity Low_complexity 1 31 0 2175 106 0 7 chr17 4060348 4060649 -81377831 - AluSq SINE Alu -14 299 1 1154 150 19 33 chr17 4060653 4060816 -81377664 - AluJo SINE Alu -18 294 130 233 0 62 0 chr17 4060816 4060848 -81377632 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 2024 71 18 18 chr17 4060848 4061130 -81377350 - AluY SINE Alu -29 282 1 1154 150 19 33 chr17 4061130 4061178 -81377302 - AluJo SINE Alu -180 132 85 637 170 30 0 chr17 4061247 4061347 -81377133 - U6 snRNA snRNA -4 103 1 2026 125 0 0 chr17 4061453 4061750 -81376730 + AluSx SINE Alu 1 297 -15 2176 101 7 3 chr17 4061785 4062093 -81376387 + AluSg SINE Alu 1 309 -1 397 181 21 0 chr17 4062093 4062187 -81376293 + GA-rich Low_complexity Low_complexity 1 96 0 870 71 11 50 chr17 4062189 4062371 -81376109 + (GAAA)n Simple_repeat Simple_repeat 2 176 0 505 285 85 41 chr17 4062381 4062676 -81375804 - HAL1 LINE L1 -84 2423 2116 897 300 98 23 chr17 4062727 4063218 -81375262 + MLT1G LTR MaLR 10 555 0 1666 236 83 48 chr17 4063219 4063762 -81374718 + L2 LINE L2 2381 2942 -372 2356 266 123 36 chr17 4063770 4064990 -81373490 - HAL1 LINE L1 -439 2068 743 1759 141 19 44 chr17 4065006 4065410 -81373070 - AluSp SINE Alu 0 396 1 240 261 11 45 chr17 4065426 4065514 -81372966 - HAL1 LINE L1 -1783 724 640 357 338 109 42 chr17 4065542 4065945 -81372535 - HAL1 LINE L1 -2076 431 2 379 296 23 38 chr17 4066089 4066221 -81372259 + MIR SINE MIR 133 262 0 181 263 0 0 chr17 4066608 4066646 -81371834 + MIR SINE MIR 42 79 -129 526 240 113 70 chr17 4066653 4066882 -81371598 + MIR SINE MIR 20 258 -4 2115 84 0 7 chr17 4067237 4067550 -81370930 - AluSq SINE Alu 0 313 3 2338 93 0 0 chr17 4067682 4067984 -81370496 - AluSx SINE Alu -10 302 1 1220 242 31 92 chr17 4068386 4068960 -81369520 + MER34 LTR ERV1 1 539 -3 2134 91 14 0 chr17 4070396 4070683 -81367797 - AluSp SINE Alu -22 291 1 1874 103 46 4 chr17 4070903 4071184 -81367296 + AluSq SINE Alu 1 293 -20 2382 89 0 6 chr17 4071337 4071650 -81366830 + AluSx SINE Alu 1 311 -1 29 0 0 0 chr17 4072026 4072055 -81366425 + AT_rich Low_complexity Low_complexity 1 29 0 2260 90 0 3 chr17 4072055 4072354 -81366126 + AluSq SINE Alu 1 298 -15 1252 151 5 23 chr17 4072524 4072742 -81365738 + AluJb SINE Alu 85 298 -14 231 188 0 0 chr17 4072855 4072903 -81365577 + GA-rich Low_complexity Low_complexity 4 51 0 614 237 132 26 chr17 4073961 4074151 -81364329 - MER63A DNA MER1_type 0 210 1 3652 128 11 5 chr17 4075139 4075692 -81362788 + L1PA15 LINE L1 5606 6161 -4 1079 145 0 31 chr17 4075790 4075983 -81362497 - AluSg/x SINE Alu -5 305 119 473 209 18 67 chr17 4076002 4076192 -81362288 - MER106B DNA MER1_type -5 1054 856 2008 84 4 0 chr17 4076192 4076453 -81362027 + AluSq SINE Alu 1 262 -51 225 0 0 0 chr17 4076455 4076480 -81362000 + (TAA)n Simple_repeat Simple_repeat 2 26 0 473 209 18 67 chr17 4076480 4076548 -81361932 - MER106B DNA MER1_type -204 855 1 2045 117 10 10 chr17 4076644 4076942 -81361538 + AluSx SINE Alu 1 298 -14 214 346 55 16 chr17 4078434 4078561 -81359919 + L2 LINE L2 3180 3311 -2 1633 139 17 50 chr17 4078904 4079206 -81359274 - AluJb SINE Alu -20 292 1 460 263 2 14 chr17 4079234 4079371 -81359109 - MIR SINE MIR -62 146 16 203 354 0 0 chr17 4082307 4082389 -81356091 + G-rich Low_complexity Low_complexity 6 87 0 264 139 0 0 chr17 4082809 4082852 -81355628 - MIR SINE MIR -9 253 211 195 220 0 0 chr17 4083548 4083598 -81354882 + (CACG)n Simple_repeat Simple_repeat 2 51 0 187 268 71 71 chr17 4083742 4083854 -81354626 + L2 LINE L2 2722 2833 -481 2115 97 3 32 chr17 4084177 4084487 -81353993 - AluSg SINE Alu -9 301 1 245 333 37 37 chr17 4084560 4084695 -81353785 + L2 LINE L2 3129 3263 -9 2203 119 0 0 chr17 4084886 4085198 -81353282 - AluSx SINE Alu 0 312 1 1192 274 111 22 chr17 4085356 4085884 -81352596 - L1MC4a LINE L1 -588 5563 5396 2245 102 0 3 chr17 4085884 4086189 -81352291 - AluSq SINE Alu -9 304 1 1192 274 111 22 chr17 4086189 4086209 -81352271 - L1MC4a LINE L1 -755 5396 5379 532 221 40 137 chr17 4086405 4086531 -81351949 + MLT1F-int LTR MaLR 1078 1215 -156 2147 113 10 0 chr17 4086531 4086832 -81351648 + AluSq SINE Alu 3 306 -7 532 221 40 137 chr17 4086832 4087026 -81351454 + MLT1F-int LTR MaLR 1215 1367 -4 1457 211 36 75 chr17 4087032 4087472 -81351008 + MLT1F LTR MaLR 2 424 -118 1092 191 11 0 chr17 4087505 4087694 -81350786 - AluJb SINE Alu -8 304 114 2084 112 0 19 chr17 4087822 4088156 -81350324 - AluSx SINE Alu 0 312 3 1638 171 27 13 chr17 4088682 4088806 -81349674 + AluJo SINE Alu 3 124 -188 2232 107 0 3 chr17 4088806 4089114 -81349366 + AluSx SINE Alu 1 307 -5 1638 171 27 13 chr17 4089114 4089287 -81349193 + AluJo SINE Alu 124 304 -8 2178 88 14 10 chr17 4089357 4089654 -81348826 + AluSx SINE Alu 1 298 -14 1035 174 19 31 chr17 4090217 4090507 -81347973 - MER89 LTR ERV1 -170 389 1 707 201 41 106 chr17 4090507 4090800 -81347680 - L1ME LINE L1 -628 5538 5265 757 83 0 0 chr17 4090949 4091045 -81347435 + AluSc SINE Alu 201 296 -13 23 0 0 0 chr17 4091967 4091990 -81346490 + AT_rich Low_complexity Low_complexity 1 23 0 205 276 0 26 chr17 4092836 4092912 -81345568 + (TG)n Simple_repeat Simple_repeat 1 74 0 230 274 0 0 chr17 4097703 4097765 -81340715 + C-rich Low_complexity Low_complexity 6 67 0 2095 92 0 27 chr17 4098758 4099050 -81339430 - AluSg SINE Alu -26 284 1 1974 133 10 0 chr17 4099538 4099832 -81338648 - AluSg SINE Alu -13 297 1 271 317 125 0 chr17 4100285 4100405 -81338075 + MIR SINE MIR 95 229 -33 200 184 0 0 chr17 4101420 4101458 -81337022 + (GGCTG)n Simple_repeat Simple_repeat 4 41 0 2061 104 9 35 chr17 4102120 4102438 -81336042 + AluSq SINE Alu 1 310 -3 241 242 13 41 chr17 4103319 4103431 -81335049 + MIR SINE MIR 10 114 -94 * 311 349 61 28 chr17 4103414 4103626 -81334854 - MIR SINE MIR -3 259 41 744 156 0 0 chr17 4103653 4103762 -81334718 - FRAM SINE Alu -58 118 10 2310 92 0 0 chr17 4104052 4104347 -81334133 + AluSq SINE Alu 1 295 -18 2018 109 46 0 chr17 4105463 4105747 -81332733 - AluSx SINE Alu -15 297 1 198 208 21 21 chr17 4105818 4105866 -81332614 - MIR SINE MIR -186 76 29 1192 234 72 16 chr17 4106049 4106356 -81332124 + MER33 DNA MER1_type 1 324 0 320 311 116 66 chr17 4108318 4108620 -81329860 - L2 LINE L2 0 3313 2997 558 300 191 10 chr17 4108745 4109132 -81329348 - L2 LINE L2 -537 2777 2321 2282 89 0 7 chr17 4109937 4110241 -81328239 - AluSq SINE Alu -11 302 1 1688 186 0 0 chr17 4110242 4110551 -81327929 - AluJo SINE Alu 0 312 2 992 248 66 106 chr17 4113780 4114155 -81324325 + L1ME3A LINE L1 5690 6042 -128 2210 103 6 10 chr17 4114155 4114467 -81324013 - AluSq SINE Alu -2 311 1 992 248 66 106 chr17 4114467 4114592 -81323888 + L1ME3A LINE L1 6042 6170 0 359 299 86 0 chr17 4114719 4114836 -81323644 - MER5A DNA MER1_type -4 185 59 612 323 50 0 chr17 4115577 4115797 -81322683 + MIR SINE MIR 26 256 -6 213 39 0 0 chr17 4115869 4115895 -81322585 + (CA)n Simple_repeat Simple_repeat 1 26 0 215 227 0 0 chr17 4115917 4115961 -81322519 + (TTCA)n Simple_repeat Simple_repeat 2 45 0 634 241 59 18 chr17 4115962 4116132 -81322348 + MER5B DNA MER1_type 2 178 0 202 254 8 164 chr17 4116145 4116267 -81322213 + MER5B DNA MER1_type 17 119 -59 2225 104 0 3 chr17 4116274 4116572 -81321908 - AluSq SINE Alu -16 297 1 372 253 0 0 chr17 4116896 4116979 -81321501 - ERVL LTR ERVL -3757 2007 1925 824 77 0 0 chr17 4116988 4117092 -81321388 - AluSg/x SINE Alu -10 302 199 548 293 95 31 chr17 4117129 4117264 -81321216 + HERVL LTR ERVL 2333 2458 -3196 2091 94 18 0 chr17 4117264 4117623 -81320857 - AluSx SINE Alu 0 364 1 548 293 95 31 chr17 4117623 4117671 -81320809 + HERVL LTR ERVL 2458 2501 -3153 2217 121 0 0 chr17 4117671 4117976 -81320504 - AluSx SINE Alu -7 305 1 548 293 95 31 chr17 4117976 4118084 -81320396 + HERVL LTR ERVL 2501 2645 -3009 572 259 30 55 chr17 4118109 4118345 -81320135 + LTR67 LTR ERVL 328 557 0 2171 93 43 10 chr17 4118858 4119160 -81319320 - AluSx SINE Alu 0 312 1 207 0 0 0 chr17 4119170 4119193 -81319287 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 1367 94 0 6 chr17 4119215 4119396 -81319084 - AluSp SINE Alu -133 180 1 1504 213 94 43 chr17 4119470 4119982 -81318498 - LTR55 LTR ERV -10 538 1 1622 175 11 0 chr17 4120132 4120401 -81318079 - AluJo SINE Alu -4 308 37 2062 140 3 13 chr17 4120438 4120753 -81317727 - AluSx SINE Alu 0 312 1 2221 108 0 3 chr17 4120920 4121225 -81317255 - AluSx SINE Alu -5 307 4 265 143 200 0 chr17 4121252 4121322 -81317158 - MER105 DNA DNA 0 204 121 2108 107 3 10 chr17 4121718 4122017 -81316463 + AluSx SINE Alu 3 299 -13 649 268 49 0 chr17 4122048 4122272 -81316208 + L1MB2 LINE L1 5936 6170 -1 282 56 0 0 chr17 4122414 4122450 -81316030 + (TG)n Simple_repeat Simple_repeat 1 36 0 775 172 8 0 chr17 4123100 4123222 -81315258 - FLAM_C SINE Alu -18 125 3 210 37 0 0 chr17 4123253 4123280 -81315200 + (TA)n Simple_repeat Simple_repeat 2 28 0 2327 82 0 0 chr17 4123280 4123574 -81314906 - AluSg SINE Alu -16 294 1 23 33 0 0 chr17 4125195 4125225 -81313255 + AT_rich Low_complexity Low_complexity 1 30 0 2420 222 65 29 chr17 4125292 4125881 -81312599 - L1ME1 LINE L1 -108 6058 5435 795 88 0 0 chr17 4125881 4125994 -81312486 + (TG)n Simple_repeat Simple_repeat 2 114 0 2420 222 65 29 chr17 4125994 4126152 -81312328 - L1ME1 LINE L1 -731 5435 5284 819 149 0 0 chr17 4126152 4126286 -81312194 - AluSp/q SINE Alu -5 308 175 270 0 0 0 chr17 4127104 4127134 -81311346 + (TG)n Simple_repeat Simple_repeat 1 30 0 526 190 0 74 chr17 4127135 4127306 -81311174 - MIR SINE MIR -26 236 82 1585 115 27 103 chr17 4127821 4128152 -81310328 + AluYb8 SINE Alu 4 309 -9 206 264 217 39 chr17 4129049 4129178 -81309302 - L2 LINE L2 -219 3053 2902 1252 171 20 33 chr17 4329232 4329477 -81109003 - AluJo SINE Alu -70 242 1 798 328 85 32 chr17 4329499 4329996 -81108484 - L2 LINE L2 -1081 2233 1689 2185 108 0 20 chr17 4329996 4330301 -81108179 + AluSg SINE Alu 11 309 -1 798 328 85 32 chr17 4330301 4330483 -81107997 - L2 LINE L2 -1625 1689 1518 241 130 0 0 chr17 4330547 4330593 -81107887 + MADE1 DNA Mariner 1 46 -34 197 291 182 7 chr17 4330602 4330750 -81107730 - L2 LINE L2 -1897 1417 1244 330 146 0 0 chr17 4331063 4331111 -81107369 + AluSg/x SINE Alu 218 265 -37 21 0 0 0 chr17 4331214 4331235 -81107245 + AT_rich Low_complexity Low_complexity 1 21 0 304 333 103 10 chr17 4331509 4331713 -81106767 + L2 LINE L2 2847 3069 -244 2392 90 0 0 chr17 4331788 4332089 -81106391 + AluSx SINE Alu 1 301 -11 210 37 0 0 chr17 4332104 4332131 -81106349 + (TTG)n Simple_repeat Simple_repeat 3 29 0 180 195 73 0 chr17 4332759 4332800 -81105680 - L2 LINE L2 -3 3269 3226 548 212 78 60 chr17 4333417 4333634 -81104846 + L1MC4 LINE L1 5639 5859 -1949 979 248 125 21 chr17 4333634 4334135 -81104345 + L2 LINE L2 2509 3072 -241 288 0 0 0 chr17 4334135 4334167 -81104313 + (CA)n Simple_repeat Simple_repeat 1 32 0 1984 112 36 7 chr17 4334258 4334535 -81103945 + AluSg SINE Alu 1 285 -25 379 260 77 65 chr17 4334598 4334767 -81103713 + L2 LINE L2 3103 3273 -40 273 267 61 53 chr17 4334772 4334903 -81103577 + L1MD2 LINE L1 6198 6329 -30 366 333 0 0 chr17 4334911 4335001 -81103479 + L1MC4 LINE L1 6614 6703 -1339 339 298 48 0 chr17 4334959 4335043 -81103437 - L1MC4 LINE L1 -1339 6703 6616 * 1117 215 5 10 chr17 4335146 4335351 -81103129 - AluJo SINE Alu -108 204 1 1360 263 198 35 chr17 4335378 4335720 -81102760 + HAL1 LINE L1 126 411 -2096 1959 71 108 8 chr17 4335720 4335988 -81102492 + AluSx SINE Alu 1 295 -17 1360 263 198 35 chr17 4335988 4336010 -81102470 + HAL1 LINE L1 411 428 -2079 1554 170 99 7 chr17 4336010 4336293 -81102187 + AluJb SINE Alu 1 309 -3 1360 263 198 35 chr17 4336293 4336527 -81101953 + HAL1 LINE L1 428 823 -1684 1138 168 0 0 chr17 4336527 4336700 -81101780 - FRAM SINE Alu -6 170 1 287 247 35 0 chr17 4336703 4336788 -81101692 + HAL1 LINE L1 817 904 -1603 572 138 0 0 chr17 4336866 4336953 -81101527 + AluS SINE Alu 2 88 -224 2355 116 0 0 chr17 4337268 4337579 -81100901 + AluSx SINE Alu 1 311 -1 308 192 39 0 chr17 4337579 4337657 -81100823 + HAL1 LINE L1 2304 2384 -123 1035 150 63 77 chr17 4337666 4337715 -81100765 + AluJb SINE Alu 87 135 -177 2335 109 0 6 chr17 4337715 4338028 -81100452 + AluSx SINE Alu 1 311 -1 1035 150 63 77 chr17 4338028 4338185 -81100295 + AluJb SINE Alu 135 290 -22 396 203 144 25 chr17 4338190 4338308 -81100172 + HAL1 LINE L1 2376 2507 0 2240 119 7 0 chr17 4338336 4338662 -81099818 + AluSq SINE Alu 1 313 0 2429 99 0 0 chr17 4339056 4339358 -81099122 + AluSq SINE Alu 1 302 -11 2194 102 0 7 chr17 4339525 4339819 -81098661 + AluSx SINE Alu 1 292 -20 1597 194 113 100 chr17 4339973 4340095 -81098385 - L1MC4 LINE L1 -230 7812 7693 198 0 0 0 chr17 4340095 4340117 -81098363 + (CAA)n Simple_repeat Simple_repeat 2 23 0 1597 194 113 100 chr17 4340117 4340175 -81098305 - L1MC4 LINE L1 -349 7693 7637 1908 126 35 29 chr17 4340175 4340485 -81097995 - AluSx SINE Alu 0 312 1 1597 194 113 100 chr17 4340485 4340687 -81097793 - L1MC4 LINE L1 -405 7637 7439 713 124 7 103 chr17 4340687 4340832 -81097648 + FLAM_C SINE Alu 3 133 0 1597 194 113 100 chr17 4340832 4341075 -81097405 - L1MC4 LINE L1 -603 7439 7177 2485 288 64 47 chr17 4341150 4341304 -81097176 + L2 LINE L2 1882 2032 -1282 1767 175 10 10 chr17 4341304 4341613 -81096867 - AluJo SINE Alu -3 309 1 2485 288 64 47 chr17 4341613 4342494 -81095986 + L2 LINE L2 2032 2939 -375 1609 179 10 17 chr17 4342494 4342796 -81095684 - AluJo SINE Alu -12 300 1 2485 288 64 47 chr17 4342796 4342831 -81095649 + L2 LINE L2 2939 2972 -342 390 125 0 0 chr17 4342885 4342941 -81095539 + AluS SINE Alu 8 63 -237 185 261 134 0 chr17 4344045 4344164 -81094316 + L2 LINE L2 2723 2857 -457 232 283 248 25 chr17 4344308 4344626 -81093854 + L2 LINE L2 2879 3267 -46 2112 113 28 3 chr17 4345030 4345321 -81093159 + AluSq SINE Alu 1 298 -15 2240 119 3 0 chr17 4346971 4347266 -81091214 + AluSx SINE Alu 2 297 -15 208 150 25 0 chr17 4347425 4347465 -81091015 + (CCCCAG)n Simple_repeat Simple_repeat 6 46 0 363 23 0 0 chr17 4348365 4348409 -81090071 + (TG)n Simple_repeat Simple_repeat 2 45 0 186 191 0 0 chr17 4348427 4348469 -81090011 + (TG)n Simple_repeat Simple_repeat 2 43 0 309 100 0 0 chr17 4348499 4348549 -81089931 + (TG)n Simple_repeat Simple_repeat 2 51 0 357 62 0 0 chr17 4348585 4348633 -81089847 + (TG)n Simple_repeat Simple_repeat 2 49 0 251 293 13 0 chr17 4350057 4350132 -81088348 - MIR SINE MIR -8 254 179 2087 85 0 24 chr17 4350134 4350290 -81088190 - AluSx SINE Alu -14 288 141 2067 141 0 19 chr17 4350290 4350463 -81088017 - AluSx SINE Alu -6 306 140 2440 69 3 0 chr17 4350463 4350753 -81087727 - AluY SINE Alu -20 291 1 2067 141 0 19 chr17 4350753 4350891 -81087589 - AluSx SINE Alu -172 140 1 2087 85 0 24 chr17 4350891 4351029 -81087451 - AluSx SINE Alu -161 141 1 517 101 0 0 chr17 4351031 4351137 -81087343 + AluSg/x SINE Alu 214 319 0 575 232 73 6 chr17 4351137 4351301 -81087179 - MIR SINE MIR -87 175 1 241 247 34 22 chr17 4354099 4354188 -81084292 + (TCCA)n Simple_repeat Simple_repeat 2 91 0 196 296 163 10 chr17 4354188 4354286 -81084194 - L2 LINE L2 -28 3285 3173 485 104 0 0 chr17 4354436 4354513 -81083967 - Alu SINE Alu 0 311 235 6364 135 240 19 chr17 4354513 4355881 -81082599 + pTR5 LTR ERV1 748 2417 -21 346 190 76 0 chr17 4355892 4355971 -81082509 - AluSg/x SINE Alu -48 254 170 1358 129 177 12 chr17 4356249 4356497 -81081983 + AluSg SINE Alu 1 289 -11 2381 86 3 3 chr17 4356499 4356802 -81081678 + AluY SINE Alu 1 303 -8 739 196 14 0 chr17 4356803 4356946 -81081534 + AluJb SINE Alu 116 260 -52 808 364 62 44 chr17 4356947 4357759 -81080721 - L2 LINE L2 -15 3298 2474 2274 93 17 0 chr17 4357762 4358052 -81080428 + AluSx SINE Alu 1 295 -17 2419 61 3 10 chr17 4359045 4359341 -81079139 + AluSx SINE Alu 1 294 -18 302 221 13 39 chr17 4360296 4360373 -81078107 - L2 LINE L2 -3 3269 3195 298 310 87 45 chr17 4360418 4360742 -81077738 - L2 LINE L2 -195 3077 2746 280 329 65 29 chr17 4360737 4360907 -81077573 + L2 LINE L2 2426 2601 -713 * 1953 169 0 0 chr17 4361377 4361673 -81076807 - AluJb SINE Alu -16 296 1 333 278 87 24 chr17 4361995 4362121 -81076359 - L2 LINE L2 -5 3308 3175 464 299 13 32 chr17 4362251 4362405 -81076075 + L2 LINE L2 2597 2747 -567 207 0 0 0 chr17 4362794 4362817 -81075663 + (T)n Simple_repeat Simple_repeat 1 23 0 1782 149 25 38 chr17 4362852 4363167 -81075313 - AluJb SINE Alu -1 311 1 659 81 11 0 chr17 4363260 4363347 -81075133 - AluSq SINE Alu -125 188 101 2306 96 0 3 chr17 4363453 4363754 -81074726 - AluSg SINE Alu -10 300 1 1912 86 0 163 chr17 4363754 4364104 -81074376 - AluSg SINE Alu -17 293 1 188 33 0 33 chr17 4364105 4364135 -81074345 + (TTTTA)n Simple_repeat Simple_repeat 3 31 0 2028 117 0 28 chr17 4364135 4364425 -81074055 - AluSx SINE Alu -30 282 1 1234 187 49 49 chr17 4364427 4364753 -81073727 - L1MB7 LINE L1 -45 6139 5814 542 182 27 36 chr17 4364769 4364879 -81073601 - FLAM_A SINE Alu -33 109 1 1307 170 87 7 chr17 4364883 4364911 -81073569 - L1MB7 LINE L1 -356 5828 5804 2778 163 20 38 chr17 4364911 4365471 -81073009 + MER44D DNA MER2_type 1 605 0 1307 170 87 7 chr17 4365471 4365730 -81072750 - L1MB7 LINE L1 -380 5804 5518 395 247 17 98 chr17 4365734 4365771 -81072709 + L2 LINE L2 2991 3029 -284 2424 88 0 0 chr17 4365771 4366067 -81072413 - AluSq SINE Alu -17 296 1 395 247 17 98 chr17 4366067 4366264 -81072216 + L2 LINE L2 3029 3206 -107 2668 50 0 0 chr17 4366310 4366609 -81071871 - AluY SINE Alu -12 299 1 2191 127 0 0 chr17 4368064 4368355 -81070125 - AluSx SINE Alu -21 291 1 2717 145 12 79 chr17 4368365 4368771 -81069709 - L1PB3 LINE L1 -2 6152 5795 2179 97 4 4 chr17 4368771 4369049 -81069431 - AluSg SINE Alu -32 278 1 2717 145 12 79 chr17 4369049 4369223 -81069257 - L1PB3 LINE L1 -359 5795 5611 5959 194 22 13 chr17 4369228 4370428 -81068052 - L1MB7 LINE L1 -758 5388 4173 2125 143 0 3 chr17 4370428 4370742 -81067738 - AluSq SINE Alu 0 313 1 5959 194 22 13 chr17 4370742 4370909 -81067571 - L1MB7 LINE L1 -1973 4173 4009 382 292 106 0 chr17 4370973 4371086 -81067394 - L2 LINE L2 0 3272 3148 369 181 64 0 chr17 4371164 4371257 -81067223 - MER58 DNA MER1_type -232 109 1 422 86 0 0 chr17 4371273 4371343 -81067137 - AluY SINE Alu -7 302 233 1496 106 0 0 chr17 4371343 4371531 -81066949 - AluY SINE Alu -122 189 2 2079 153 3 0 chr17 4371726 4372034 -81066446 + AluSx SINE Alu 1 309 -3 2664 50 3 0 chr17 4372037 4372339 -81066141 + AluY SINE Alu 1 303 -8 1979 151 14 0 chr17 4373383 4373674 -81064806 - AluJb SINE Alu -17 295 1 21 0 0 0 chr17 4373692 4373713 -81064767 + AT_rich Low_complexity Low_complexity 1 21 0 2344 107 0 0 chr17 4373737 4374036 -81064444 - AluSc SINE Alu -10 299 1 1849 107 19 91 chr17 4374037 4374356 -81064124 - AluSx SINE Alu -16 296 1 2166 127 3 3 chr17 4374978 4375277 -81063203 + AluSx SINE Alu 1 299 -13 353 333 67 17 chr17 4375342 4375522 -81062958 - MIR SINE MIR -14 248 60 257 324 54 0 chr17 4375523 4375634 -81062846 + MER117 DNA MER1_type 26 142 -55 1478 156 5 9 chr17 4376299 4376523 -81061957 + AluSg/x SINE Alu 72 294 -18 897 171 29 0 chr17 4377079 4377219 -81061261 - FRAM SINE Alu -24 152 9 2390 95 0 3 chr17 4377463 4377759 -81060721 - AluSg SINE Alu -15 295 1 1780 139 63 21 chr17 4377759 4378046 -81060434 - AluJb SINE Alu -13 299 1 1154 209 60 38 chr17 4378046 4378362 -81060118 - Charlie4a DNA MER1_type -185 323 1 22 0 0 0 chr17 4381788 4381810 -81056670 + AT_rich Low_complexity Low_complexity 1 22 0 278 254 213 25 chr17 4381810 4381932 -81056548 - MIR SINE MIR -56 206 62 593 154 0 77 chr17 4383375 4383570 -81054910 + GA-rich Low_complexity Low_complexity 1 180 0 2067 120 10 0 chr17 4384950 4385250 -81053230 - AluSg SINE Alu -7 303 1 188 206 0 0 chr17 4385469 4385503 -81052977 - L2 LINE L2 -264 3049 3016 283 316 62 37 chr17 4385688 4385932 -81052548 - L1MC4 LINE L1 -104 7938 7689 267 295 67 9 chr17 4386029 4386134 -81052346 + L3 LINE CR1 157 267 -1310 22 0 0 0 chr17 4386305 4386327 -81052153 + AT_rich Low_complexity Low_complexity 1 22 0 286 319 121 28 chr17 4386512 4386760 -81051720 + L2 LINE L2 2690 2960 -354 1898 101 18 0 chr17 4386813 4387089 -81051391 + AluSx SINE Alu 15 295 -17 1503 120 4 21 chr17 4387982 4388044 -81050436 + AluSq SINE Alu 75 137 -176 2239 79 10 0 chr17 4388044 4388336 -81050144 + AluSx SINE Alu 1 295 -17 1503 120 4 21 chr17 4388336 4388515 -81049965 + AluSq SINE Alu 137 312 -1 338 273 167 0 chr17 4388741 4388873 -81049607 - MIR SINE MIR -62 200 47 186 191 0 0 chr17 4389465 4389507 -81048973 + (TAA)n Simple_repeat Simple_repeat 1 42 0 2051 90 11 4 chr17 4389830 4390137 -81048343 + AluSg SINE Alu 1 309 0 690 188 39 0 chr17 4390272 4390400 -81048080 + FLAM_C SINE Alu 1 133 0 238 200 0 0 chr17 4390659 4390704 -81047776 + L2 LINE L2 3267 3311 -2 1709 157 131 52 chr17 4391474 4391694 -81046786 - MER39 LTR ERV1 0 707 506 2201 88 14 0 chr17 4391694 4391988 -81046492 + AluSp SINE Alu 1 298 -15 1709 157 131 52 chr17 4391988 4392250 -81046230 - MER39 LTR ERV1 -201 506 5 371 281 10 97 chr17 4392368 4392564 -81045916 + MIR SINE MIR 25 203 -59 1904 102 11 0 chr17 4392753 4393018 -81045462 - AluSq SINE Alu -45 268 1 678 269 46 102 chr17 4393179 4393589 -81044891 - MLT1K LTR MaLR -26 562 176 1314 48 6 0 chr17 4393589 4393755 -81044725 - THE1C LTR MaLR 0 375 209 1113 67 0 0 chr17 4394055 4394190 -81044290 + AluSq/x SINE Alu 1 135 -177 2090 107 7 13 chr17 4394190 4394498 -81043982 + AluSx SINE Alu 1 306 -6 2168 129 8 38 chr17 4394707 4394843 -81043637 - L1PA16 LINE L1 0 6166 6028 2330 95 0 0 chr17 4394843 4395148 -81043332 - AluSx SINE Alu -7 305 1 2168 129 8 38 chr17 4395148 4395383 -81043097 - L1PA16 LINE L1 -138 6028 5806 445 286 70 66 chr17 4395420 4395586 -81042894 + MLT1J LTR MaLR 234 398 -113 189 0 0 0 chr17 4395586 4395607 -81042873 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2101 92 0 7 chr17 4395609 4395893 -81042587 - AluSx SINE Alu -29 283 2 445 286 70 66 chr17 4395893 4395964 -81042516 + MLT1J LTR MaLR 398 475 -36 2148 105 23 3 chr17 4396137 4396443 -81042037 - AluSx SINE Alu 0 312 1 729 237 121 22 chr17 4396461 4396472 -81042008 + HsTC2 DNA Tc2 2 11 -1887 1554 117 121 23 chr17 4396472 4396736 -81041744 - AluSg SINE Alu -20 290 1 729 237 121 22 chr17 4396736 4396948 -81041532 + HsTC2 DNA Tc2 11 247 -1651 1502 214 21 8 chr17 4396954 4397333 -81041147 + L1M4 LINE L1 4375 4758 -1388 1068 165 114 111 chr17 4397334 4397653 -81040827 + AluJo SINE Alu 1 320 0 2143 97 13 13 chr17 4397662 4397971 -81040509 + AluSp SINE Alu 2 310 -3 1945 138 22 28 chr17 4397976 4398338 -81040142 + L1MC1 LINE L1 5918 6277 -56 969 113 0 0 chr17 4398338 4398471 -81040009 + AluSq/x SINE Alu 1 133 -179 222 118 0 0 chr17 4398471 4398505 -81039975 + (A)n Simple_repeat Simple_repeat 1 34 0 485 73 0 15 chr17 4398505 4398573 -81039907 + L1MC1 LINE L1 6261 6327 -6 1972 118 0 10 chr17 4398574 4398902 -81039578 + AluSx SINE Alu 1 312 0 574 209 201 14 chr17 4399031 4399316 -81039164 + HsTC2 DNA Tc2 1296 1811 -87 1987 131 0 0 chr17 4399316 4399626 -81038854 + AluSx SINE Alu 1 310 0 243 310 113 48 chr17 4399673 4399902 -81038578 - L2 LINE L2 -23 3290 3047 518 100 0 0 chr17 4400023 4400093 -81038387 + AluS SINE Alu 2 71 -241 273 57 0 0 chr17 4400587 4400622 -81037858 + (A)n Simple_repeat Simple_repeat 1 35 0 313 250 31 102 chr17 4400775 4400903 -81037577 - L2 LINE L2 -6 3307 3189 2345 68 0 3 chr17 4401080 4401374 -81037106 - AluSc SINE Alu -16 293 1 452 292 23 32 chr17 4401376 4401595 -81036885 - L1MC5 LINE L1 -429 7532 7316 280 325 155 48 chr17 4401598 4401717 -81036763 + L2 LINE L2 2809 2914 -358 2257 105 0 0 chr17 4401717 4402022 -81036458 - AluSq SINE Alu -8 305 1 280 325 155 48 chr17 4402022 4402314 -81036166 + L2 LINE L2 2914 3264 -8 279 330 80 18 chr17 4402633 4402745 -81035735 - L2 LINE L2 -4 3309 3191 854 241 108 56 chr17 4402747 4402857 -81035623 + MER58B DNA MER1_type 1 104 -2316 2261 58 0 21 chr17 4402857 4403148 -81035332 + AluY SINE Alu 17 301 -10 854 241 108 56 chr17 4403148 4403360 -81035120 + MER58B DNA MER1_type 104 340 -1 548 222 73 43 chr17 4403374 4403608 -81034872 - MER112 DNA MER1_type -12 248 8 726 139 47 47 chr17 4403608 4403737 -81034743 + FLAM_C SINE Alu 1 129 -4 356 259 9 19 chr17 4403851 4403959 -81034521 - L2 LINE L2 -196 3076 2970 2297 100 0 0 chr17 4403962 4404263 -81034217 + AluSg1 SINE Alu 2 302 -7 1324 102 5 0 chr17 4404564 4404751 -81033729 - AluSp SINE Alu -5 308 121 350 54 0 54 chr17 4404759 4404833 -81033647 + (TTTTG)n Simple_repeat Simple_repeat 1 70 0 1234 70 0 41 chr17 4404834 4405005 -81033475 - AluY SINE Alu -147 164 1 760 159 0 23 chr17 4405008 4405140 -81033340 - AluJo/FLAM SINE Alu -173 129 1 733 246 28 9 chr17 4405140 4405355 -81033125 - L1M4 LINE L1 -3371 2775 2557 711 259 118 4 chr17 4405503 4405731 -81032749 - MIR SINE MIR -3 259 6 2155 125 0 0 chr17 4405827 4406139 -81032341 - AluSx SINE Alu 0 312 1 1723 170 3 3 chr17 4406147 4406436 -81032044 - AluJb SINE Alu -23 289 1 2271 92 0 10 chr17 4406626 4406929 -81031551 + AluSx SINE Alu 2 301 -11 332 285 57 83 chr17 4406946 4407174 -81031306 + MIR SINE MIR 39 260 -2 1466 296 57 63 chr17 4407304 4407723 -81030757 + L2 LINE L2 107 527 -2787 2582 69 41 72 chr17 4407723 4408142 -81030338 - L1MA2 LINE L1 0 6304 5899 2055 117 3 13 chr17 4408142 4408451 -81030029 - AluSx SINE Alu -1 311 6 1466 296 57 63 chr17 4408451 4408951 -81029529 + L2 LINE L2 525 1021 -2293 1284 114 0 0 chr17 4408982 4409158 -81029322 - AluSx SINE Alu -136 176 1 201 363 22 22 chr17 4409172 4409263 -81029217 + L2 LINE L2 3222 3312 -1 1289 113 11 0 chr17 4409336 4409521 -81028959 + AluSp SINE Alu 1 187 -126 2165 101 13 7 chr17 4409785 4410092 -81028388 + AluSx SINE Alu 1 309 -3 233 213 85 11 chr17 4410229 4410323 -81028157 + L1MC5 LINE L1 7827 7927 -34 2361 77 0 0 chr17 4410339 4410636 -81027844 + AluSg SINE Alu 1 297 -13 310 229 9 48 chr17 4410643 4410748 -81027732 - MER113 DNA MER1_type? -417 104 4 240 226 0 0 chr17 4413365 4413427 -81025053 + GA-rich Low_complexity Low_complexity 2 63 0 718 255 128 30 chr17 4413712 4414010 -81024470 + MER102b DNA MER1_type 15 341 0 401 252 45 68 chr17 4415167 4415344 -81023136 + MIR3 SINE MIR 7 186 -75 1585 149 76 4 chr17 4415466 4415741 -81022739 + AluJb SINE Alu 1 295 -17 28 0 0 0 chr17 4418358 4418386 -81020094 + GC_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr17 4418453 4418474 -81020006 + GC_rich Low_complexity Low_complexity 1 21 0 1825 86 12 4 chr17 4418672 4418929 -81019551 - AluSq SINE Alu -8 305 47 848 49 0 0 chr17 4419369 4419471 -81019009 + AluS SINE Alu 1 102 -210 2242 92 3 0 chr17 4420042 4420347 -81018133 - AluY SINE Alu -5 306 1 29 0 0 0 chr17 4420417 4420446 -81018034 + AT_rich Low_complexity Low_complexity 1 29 0 578 157 10 0 chr17 4420528 4420630 -81017850 - AluJb SINE Alu 0 312 210 434 76 0 51 chr17 4420734 4420804 -81017676 + Alu SINE Alu 232 304 -7 2477 43 0 10 chr17 4420804 4421108 -81017372 + AluY SINE Alu 1 301 -10 607 148 157 0 chr17 4421110 4421225 -81017255 + FLAM_C SINE Alu 1 133 0 2046 108 10 3 chr17 4421230 4421526 -81016954 + AluSp SINE Alu 1 298 -15 2151 98 0 7 chr17 4421533 4421828 -81016652 + AluSq SINE Alu 1 293 -20 203 303 13 13 chr17 4421977 4422053 -81016427 + L2 LINE L2 3016 3091 -181 2244 66 0 10 chr17 4422241 4422555 -81015925 + AluSx SINE Alu 1 311 0 1665 135 13 50 chr17 4422695 4422998 -81015482 + AluJo SINE Alu 1 292 -20 316 325 33 26 chr17 4423069 4423220 -81015260 + L2 LINE L2 3150 3301 -12 2274 86 0 3 chr17 4423279 4423580 -81014900 + AluSc SINE Alu 1 300 -9 1007 208 13 22 chr17 4423651 4423882 -81014598 + AluJo SINE Alu 71 299 -13 1825 125 4 4 chr17 4423889 4424170 -81014310 + AluY SINE Alu 5 285 -26 31 0 0 0 chr17 4424170 4424201 -81014279 + AT_rich Low_complexity Low_complexity 1 31 0 915 142 0 0 chr17 4424233 4424374 -81014106 - AluJb SINE Alu -4 308 168 728 85 0 19 chr17 4424496 4424602 -81013878 + AluSp/q SINE Alu 198 301 -12 2220 89 3 13 chr17 4424944 4425300 -81013180 - AluY SINE Alu 0 353 1 2124 92 20 3 chr17 4425300 4425595 -81012885 - AluSp SINE Alu -13 300 1 26 50 0 0 chr17 4425648 4425688 -81012792 + AT_rich Low_complexity Low_complexity 1 40 0 1844 133 25 3 chr17 4425689 4425975 -81012505 - AluSx SINE Alu -20 292 1 562 71 0 36 chr17 4426007 4426091 -81012389 + AluJb SINE Alu 84 164 -148 2218 86 0 3 chr17 4426229 4426521 -81011959 - AluSc SINE Alu -14 295 5 1232 124 0 0 chr17 4427066 4427244 -81011236 - AluSc SINE Alu 0 309 132 2194 105 0 3 chr17 4427244 4427540 -81010940 - AluSp SINE Alu -18 295 1 1923 129 0 17 chr17 4427540 4427835 -81010645 - AluJb SINE Alu -12 300 11 281 321 94 31 chr17 4427835 4428147 -81010333 - L1ME LINE L1 -355 5809 5479 2063 76 6 51 chr17 4428156 4428471 -81010009 + AluSg SINE Alu 2 302 -8 238 162 0 0 chr17 4428532 4428569 -81009911 - MLT1B LTR MaLR 0 390 354 780 199 13 0 chr17 4428612 4428768 -81009712 - MLT1B LTR MaLR -41 349 192 2119 107 0 7 chr17 4430061 4430373 -81008107 - AluY SINE Alu -13 298 1 831 229 28 17 chr17 4430387 4430566 -81007914 + AluJb SINE Alu 131 311 -1 2221 107 10 0 chr17 4430587 4430896 -81007584 + AluSp SINE Alu 1 312 -1 323 128 0 0 chr17 4431338 4431385 -81007095 + AluSp/q SINE Alu 204 250 -53 1063 147 17 60 chr17 4431385 4431617 -81006863 + AluJo SINE Alu 85 306 -6 2280 74 0 0 chr17 4431632 4431915 -81006565 + AluSx SINE Alu 13 295 -17 494 339 23 6 chr17 4431935 4432106 -81006374 - MLT1K LTR MaLR -282 306 133 336 48 0 0 chr17 4432340 4432382 -81006098 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 2094 113 0 0 chr17 4432409 4432716 -81005764 - AluSq SINE Alu 0 309 3 1903 152 3 25 chr17 4433867 4434052 -81004428 - AluJb SINE Alu -4 308 131 2238 100 3 0 chr17 4434052 4434363 -81004117 - AluSx SINE Alu 0 312 1 1903 152 3 25 chr17 4434363 4434492 -81003988 - AluJb SINE Alu -181 131 1 2035 94 30 17 chr17 4435097 4435395 -81003085 + AluSx SINE Alu 5 306 -6 349 324 27 0 chr17 4435486 4435597 -81002883 + L2 LINE L2 3193 3306 -7 664 148 0 19 chr17 4435619 4435727 -81002753 + FRAM SINE Alu 62 167 -9 2281 103 3 0 chr17 4435785 4436095 -81002385 + AluSp SINE Alu 1 311 -2 311 347 134 14 chr17 4436119 4436420 -81002060 - L2 LINE L2 -228 3085 2741 2277 64 0 20 chr17 4436422 4436718 -81001762 - AluY SINE Alu -16 295 6 1896 232 96 45 chr17 4436764 4437021 -81001459 - L1ME3A LINE L1 -5 6165 5923 2033 84 24 14 chr17 4437021 4437308 -81001172 - AluSx SINE Alu -22 290 1 1896 232 96 45 chr17 4437308 4437447 -81001033 - L1ME3A LINE L1 -247 5923 5793 2177 124 0 6 chr17 4437447 4437761 -81000719 - AluSx SINE Alu 0 312 1 1896 232 96 45 chr17 4437761 4437988 -81000492 - L1ME3A LINE L1 -377 5793 5509 337 335 11 57 chr17 4438001 4438077 -81000403 - L2 LINE L2 -613 2701 2623 2152 111 3 0 chr17 4438077 4438384 -81000096 + AluSg SINE Alu 1 308 -2 337 335 11 57 chr17 4438384 4438483 -80999997 - L2 LINE L2 -691 2623 2534 1610 171 3 45 chr17 4438616 4438762 -80999718 + AluJo SINE Alu 1 129 -183 2201 95 3 0 chr17 4438762 4439057 -80999423 + AluSp SINE Alu 1 296 -17 1610 171 3 45 chr17 4439057 4439220 -80999260 + AluJo SINE Alu 129 297 -15 1674 169 28 0 chr17 4439492 4439776 -80998704 + AluJb SINE Alu 1 292 -20 2340 83 0 3 chr17 4439935 4440236 -80998244 + AluSc SINE Alu 1 300 -9 1620 182 30 0 chr17 4440315 4440612 -80997868 + AluJo SINE Alu 1 306 -6 2225 106 3 0 chr17 4441211 4441514 -80996966 - AluSp SINE Alu -9 304 1 254 300 56 0 chr17 4441549 4441639 -80996841 - MIR SINE MIR -70 192 98 1325 169 4 4 chr17 4442057 4442293 -80996187 + AluJo SINE Alu 1 236 -76 252 86 0 0 chr17 4442295 4442330 -80996150 + (A)n Simple_repeat Simple_repeat 1 35 0 1211 136 81 140 chr17 4442343 4442651 -80995829 + AluSq SINE Alu 2 291 -12 1859 144 6 13 chr17 4442661 4442974 -80995506 - AluSx SINE Alu -1 311 1 2040 91 63 0 chr17 4443251 4443537 -80994943 - AluSx SINE Alu -7 305 2 379 297 105 38 chr17 4444496 4444623 -80993857 - L2 LINE L2 -58 3255 3138 1712 139 49 7 chr17 4444623 4444910 -80993570 - AluJb SINE Alu -13 299 1 379 297 105 38 chr17 4444910 4445095 -80993385 - L2 LINE L2 -175 3138 2922 1958 136 7 3 chr17 4445212 4445514 -80992966 - AluJb SINE Alu -9 303 1 1910 143 17 0 chr17 4445631 4445924 -80992556 + AluSx SINE Alu 7 304 -8 2168 45 7 41 chr17 4446102 4446429 -80992051 + AluY SINE Alu 1 317 0 180 77 0 0 chr17 4447463 4447489 -80990991 + (CAG)n Simple_repeat Simple_repeat 3 28 0 562 267 53 16 chr17 4447707 4447894 -80990586 - MIR SINE MIR -3 259 66 2141 78 0 19 chr17 4448194 4448501 -80989979 - AluSc SINE Alu -8 301 1 1984 86 52 0 chr17 4448681 4448982 -80989498 - AluSx SINE Alu 0 315 1 245 347 116 0 chr17 4449049 4449170 -80989310 - L2 LINE L2 -1 3271 3137 226 247 340 0 chr17 4449178 4449275 -80989205 + L2 LINE L2 3141 3270 -2 1076 93 0 0 chr17 4449426 4449565 -80988915 + AluSg SINE Alu 1 139 -171 361 75 0 0 chr17 4449570 4449623 -80988857 + Alu SINE Alu 250 302 0 371 243 103 26 chr17 4449701 4449874 -80988606 - MIR SINE MIR -10 252 63 880 260 76 63 chr17 4451932 4452214 -80986266 + L2 LINE L2 2211 2503 -811 2341 93 0 0 chr17 4452214 4452526 -80985954 - AluSp SINE Alu -1 312 1 880 260 76 63 chr17 4452526 4452701 -80985779 + L2 LINE L2 2503 2674 -640 2210 107 0 13 chr17 4452742 4453059 -80985421 - AluSq SINE Alu 0 313 1 284 226 113 0 chr17 4453068 4453192 -80985288 - L1M4 LINE L1 -2191 3955 3818 1347 109 10 0 chr17 4453192 4453385 -80985095 - AluSg/x SINE Alu -9 301 107 338 23 0 0 chr17 4453385 4453428 -80985052 + AluSg/x SINE Alu 92 134 -166 741 231 64 0 chr17 4453428 4453584 -80984896 + AluJo/FRAM SINE Alu 137 302 0 2005 183 23 76 chr17 4453606 4453942 -80984538 + L1M4 LINE L1 3951 4246 -1900 1724 107 133 0 chr17 4453942 4454205 -80984275 + AluSg SINE Alu 1 298 -2 2005 183 23 76 chr17 4454205 4454437 -80984043 + L1M4 LINE L1 4246 4489 -1657 2113 110 10 0 chr17 4454437 4454737 -80983743 + AluSg SINE Alu 1 303 -7 269 23 0 70 chr17 4454751 4454794 -80983686 + (GAAAA)n Simple_repeat Simple_repeat 4 43 0 1562 171 19 20 chr17 4454795 4454948 -80983532 + L1M4 LINE L1 4741 4893 -1253 2284 65 10 19 chr17 4454948 4455256 -80983224 - AluY SINE Alu -5 306 2 1562 171 19 20 chr17 4455256 4455542 -80982938 + L1M4 LINE L1 4893 5308 -838 1774 98 0 8 chr17 4455543 4455788 -80982692 + AluSx SINE Alu 1 243 -69 2781 12 0 6 chr17 4455807 4456127 -80982353 + AluYb8 SINE Alu 1 318 0 783 151 22 29 chr17 4456132 4456271 -80982209 + FRAM SINE Alu 1 138 -38 1828 175 13 34 chr17 4456298 4456721 -80981759 + L1M4 LINE L1 5254 5667 -507 190 0 0 62 chr17 4456821 4456853 -80981627 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 1907 62 0 4 chr17 4456857 4457098 -80981382 - AluSg SINE Alu -37 273 34 2244 93 0 3 chr17 4458191 4458492 -80979988 + AluSx SINE Alu 1 300 -12 1343 187 37 23 chr17 4460390 4460562 -80977918 - AluJo SINE Alu -8 304 125 2068 138 0 0 chr17 4460562 4460874 -80977606 - AluSx SINE Alu 0 312 1 1343 187 37 23 chr17 4460874 4461001 -80977479 - AluJo SINE Alu -187 125 1 888 187 22 39 chr17 4461002 4461014 -80977466 - L1MC1 LINE L1 0 6333 6322 1946 103 4 0 chr17 4461014 4461277 -80977203 - AluSp SINE Alu -12 301 38 2223 94 0 7 chr17 4461277 4461576 -80976904 - AluSx SINE Alu -15 297 1 888 187 22 39 chr17 4461576 4461744 -80976736 - L1MC1 LINE L1 -9 6324 6155 691 279 67 41 chr17 4461744 4462059 -80976421 + L2 LINE L2 2974 3296 -17 818 202 5 58 chr17 4462785 4462895 -80975585 + MER45A DNA AcHobo 1 98 -1483 2209 82 10 0 chr17 4462895 4463188 -80975292 - AluY SINE Alu -15 296 1 818 202 5 58 chr17 4463188 4463265 -80975215 + MER45A DNA AcHobo 98 178 0 413 245 9 107 chr17 4464006 4464083 -80974397 - MIR SINE MIR -17 245 162 2118 102 3 7 chr17 4464083 4464378 -80974102 - AluSx SINE Alu -18 294 1 413 245 9 107 chr17 4464378 4464534 -80973946 - MIR SINE MIR -100 162 34 2451 65 0 7 chr17 4464576 4464885 -80973595 - AluY SINE Alu -4 307 1 1969 135 0 0 chr17 4464885 4465181 -80973299 - AluSx SINE Alu -16 296 1 2414 77 0 0 chr17 4465352 4465663 -80972817 - AluY SINE Alu 0 311 1 1926 97 56 3 chr17 4465755 4466043 -80972437 - AluSc SINE Alu -6 303 1 292 342 13 13 chr17 4466049 4466066 -80972414 - L1MA10 LINE L1 0 6334 6318 913 212 8 54 chr17 4466066 4466307 -80972173 - L1ME2 LINE L1 -9 6155 5926 2131 70 35 3 chr17 4466308 4466593 -80971887 + AluSp SINE Alu 1 294 -19 1307 117 187 44 chr17 4466602 4466829 -80971651 + AluJb SINE Alu 1 275 -37 2399 60 0 7 chr17 4466829 4467131 -80971349 + AluY SINE Alu 1 300 -11 1307 117 187 44 chr17 4467131 4467176 -80971304 + AluJb SINE Alu 275 312 0 1325 223 72 5 chr17 4467178 4467596 -80970884 + L1ME2 LINE L1 5326 5771 -393 365 314 116 0 chr17 4467648 4467769 -80970711 + L2 LINE L2 3137 3271 -1 25 75 0 0 chr17 4467934 4467987 -80970493 + GC_rich Low_complexity Low_complexity 1 53 0 21 57 0 0 chr17 4468169 4468204 -80970276 + GC_rich Low_complexity Low_complexity 1 35 0 36 77 0 0 chr17 4468234 4468312 -80970168 + GC_rich Low_complexity Low_complexity 1 78 0 23 0 0 0 chr17 4468698 4468721 -80969759 + GC_rich Low_complexity Low_complexity 1 23 0 1690 157 48 0 chr17 4469859 4470153 -80968327 - AluJo SINE Alu -4 308 1 2230 99 0 0 chr17 4471522 4471825 -80966655 + AluSq SINE Alu 1 303 -10 2100 62 87 3 chr17 4472448 4472737 -80965743 - AluSq SINE Alu 0 313 1 1376 170 33 33 chr17 4472974 4473274 -80965206 - AluJb SINE Alu -12 300 1 1185 111 0 0 chr17 4473281 4473443 -80965037 - AluSq SINE Alu -18 295 134 2160 120 0 0 chr17 4473443 4473752 -80964728 - AluSc SINE Alu 0 309 1 731 256 0 55 chr17 4473752 4473951 -80964529 + L1ME2 LINE L1 5925 6112 -52 2064 128 0 0 chr17 4474144 4474156 -80964324 - AluSx SINE Alu -15 297 286 195 69 0 0 chr17 4474156 4474185 -80964295 + (GTTTG)n Simple_repeat Simple_repeat 2 30 0 2064 128 0 0 chr17 4474185 4474469 -80964011 - AluSx SINE Alu -25 287 1 387 267 125 114 chr17 4474578 4474749 -80963731 - L1ME2 LINE L1 -368 5753 5585 2019 109 4 0 chr17 4474749 4475024 -80963456 + AluSx SINE Alu 13 288 -24 387 267 125 114 chr17 4475024 4475348 -80963132 - L1ME2 LINE L1 -536 5585 5251 344 268 39 4 chr17 4476223 4476459 -80962021 + (TGGA)n Simple_repeat Simple_repeat 1 244 0 2166 104 0 3 chr17 4477259 4477558 -80960922 + AluSx SINE Alu 1 298 -14 2178 91 0 7 chr17 4478540 4478836 -80959644 + AluSc SINE Alu 1 294 -15 2226 95 0 0 chr17 4478836 4479132 -80959348 + AluY SINE Alu 1 296 -15 1344 96 6 6 chr17 4480875 4481052 -80957428 + AluSq SINE Alu 1 177 -136 217 0 0 0 chr17 4481089 4481111 -80957369 + (TTG)n Simple_repeat Simple_repeat 1 22 -334 2412 72 10 0 chr17 4481111 4481403 -80957077 - AluSp SINE Alu -20 293 1 217 0 0 0 chr17 4481403 4481421 -80957059 + (TTG)n Simple_repeat Simple_repeat 21 356 0 217 0 0 0 chr17 4481421 4481445 -80957035 + (TTG)n Simple_repeat Simple_repeat 1 180 0 2121 98 40 0 chr17 4481445 4481716 -80956764 - AluSq SINE Alu -5 308 1 2556 46 7 3 chr17 4481733 4482035 -80956445 - AluY SINE Alu -8 303 1 2571 62 7 0 chr17 4482055 4482361 -80956119 - AluY SINE Alu -3 308 1 29 0 0 0 chr17 4482431 4482460 -80956020 + AT_rich Low_complexity Low_complexity 1 29 0 2051 154 3 3 chr17 4482542 4482854 -80955626 - AluJb SINE Alu 0 312 1 1821 103 96 21 chr17 4483220 4483501 -80954979 + AluSq SINE Alu 1 302 -11 1325 87 0 0 chr17 4483502 4483663 -80954817 + AluSq SINE Alu 134 294 -19 372 315 61 12 chr17 4484940 4485105 -80953375 + MIR SINE MIR 13 185 -77 302 277 107 9 chr17 4485102 4485214 -80953266 - L2 LINE L2 0 3313 3191 * 840 148 17 126 chr17 4485219 4485276 -80953204 - MER3 DNA MER1_type -3 206 144 2374 96 3 19 chr17 4485276 4485451 -80953029 - AluSx SINE Alu -3 309 140 2038 96 74 0 chr17 4485451 4485722 -80952758 - AluSg SINE Alu -17 293 3 2374 96 3 19 chr17 4485722 4485860 -80952620 - AluSx SINE Alu -172 140 1 840 148 17 126 chr17 4485860 4485907 -80952573 - MER3 DNA MER1_type -65 144 93 2368 92 3 13 chr17 4485907 4486211 -80952269 + AluSx SINE Alu 1 301 -11 840 148 17 126 chr17 4486211 4486335 -80952145 - MER3 DNA MER1_type -116 93 2 1897 162 11 0 chr17 4486480 4486758 -80951722 - AluJo SINE Alu -31 281 1 2396 109 0 6 chr17 4486769 4487081 -80951399 - AluSx SINE Alu -2 310 1 642 153 90 0 chr17 4487114 4487225 -80951255 + FLAM_A SINE Alu 1 121 -12 882 174 31 0 chr17 4487291 4487452 -80951028 - AluJo/FRAM SINE Alu 0 302 137 1944 138 7 16 chr17 4487452 4487757 -80950723 - AluJb SINE Alu -10 302 1 2550 65 10 3 chr17 4487765 4488074 -80950406 - AluSp SINE Alu 0 313 3 2351 100 7 0 chr17 4488106 4488415 -80950065 + AluY SINE Alu 1 311 0 2325 108 0 0 chr17 4488871 4489176 -80949304 - AluSg SINE Alu -5 305 1 423 181 252 0 chr17 4489312 4489439 -80949041 - MIR SINE MIR -13 249 91 2337 106 0 0 chr17 4489535 4489836 -80948644 - AluSx SINE Alu -11 301 1 217 311 78 57 chr17 4490024 4490268 -80948212 - L2 LINE L2 -188 3084 2836 778 228 0 0 chr17 4490274 4490432 -80948048 + FRAM SINE Alu 2 159 -7 2453 102 0 3 chr17 4490505 4490818 -80947662 - AluSx SINE Alu 0 312 1 2276 98 10 0 chr17 4490825 4491120 -80947360 - AluSp SINE Alu -15 298 1 590 143 151 0 chr17 4491120 4491239 -80947241 - FLAM_C SINE Alu -5 138 2 2622 43 0 10 chr17 4491242 4491546 -80946934 - AluY SINE Alu -10 301 1 2416 82 0 7 chr17 4491546 4491850 -80946630 - AluSx SINE Alu -9 303 1 281 149 0 0 chr17 4491853 4491900 -80946580 - AluSq/x SINE Alu -169 133 87 2204 106 0 3 chr17 4491901 4492185 -80946295 + AluSq SINE Alu 1 283 -30 258 56 0 0 chr17 4492277 4492313 -80946167 + (A)n Simple_repeat Simple_repeat 1 36 0 294 111 0 0 chr17 4492316 4492361 -80946119 - AluSq/x SINE Alu -199 104 60 1762 166 0 11 chr17 4492361 4492639 -80945841 + AluJb SINE Alu 22 296 -16 2657 61 0 0 chr17 4492643 4492954 -80945526 + AluY SINE Alu 1 311 0 431 276 41 8 chr17 4493192 4493315 -80945165 - MIR3 SINE MIR -17 191 65 262 226 21 75 chr17 4493901 4493994 -80944486 + GA-rich Low_complexity Low_complexity 3 90 0 2096 111 7 0 chr17 4496203 4496506 -80941974 + AluSx SINE Alu 1 305 0 341 298 118 0 chr17 4497374 4497535 -80940945 + MIR SINE MIR 57 236 -26 657 277 43 77 chr17 4497571 4497752 -80940728 + L2 LINE L2 3021 3190 -123 2176 108 0 29 chr17 4497752 4498058 -80940422 + AluSx SINE Alu 1 297 -15 657 277 43 77 chr17 4498058 4498176 -80940304 + L2 LINE L2 3190 3310 -3 2572 58 0 0 chr17 4499804 4500099 -80938381 - AluY SINE Alu -16 295 1 414 0 0 0 chr17 4500796 4500842 -80937638 + (TG)n Simple_repeat Simple_repeat 1 46 0 316 95 0 0 chr17 4500911 4500953 -80937527 + MER4E LTR ERV1 651 692 -74 2583 34 3 10 chr17 4502798 4503094 -80935386 + AluY SINE Alu 3 296 -15 2460 93 0 3 chr17 4504051 4504364 -80934116 + AluSx SINE Alu 1 312 0 660 224 105 53 chr17 4504492 4504720 -80933760 - MIR SINE MIR 0 262 23 2432 98 7 0 chr17 4504851 4505157 -80933323 - AluSx SINE Alu -4 308 1 1104 163 26 13 chr17 4505698 4505925 -80932555 - L1MB3 LINE L1 -1 6182 5953 2143 102 3 24 chr17 4506495 4506790 -80931690 - AluSx SINE Alu -15 297 9 812 204 7 0 chr17 4507538 4507690 -80930790 - FRAM SINE Alu -13 153 1 324 0 0 0 chr17 4508087 4508123 -80930357 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 858 152 65 0 chr17 4508123 4508261 -80930219 - AluSq SINE Alu -32 281 135 663 167 18 0 chr17 4508757 4508871 -80929609 + FLAM_C SINE Alu 2 117 -26 180 200 0 0 chr17 4508891 4508931 -80929549 + GA-rich Low_complexity Low_complexity 1 40 0 350 206 109 11 chr17 4509126 4509218 -80929262 + MIR SINE MIR 24 124 -138 2544 52 0 0 chr17 4509229 4509516 -80928964 - AluY SINE Alu -24 287 1 983 96 0 22 chr17 4509519 4509655 -80928825 - AluSq SINE Alu -180 133 1 421 198 62 0 chr17 4509656 4509752 -80928728 + MIR SINE MIR 113 214 -48 2384 77 3 3 chr17 4510430 4510729 -80927751 - AluSp SINE Alu -14 299 1 495 157 0 0 chr17 4510799 4510888 -80927592 - AluJ/FRAM SINE Alu -8 304 216 443 293 60 20 chr17 4510945 4511095 -80927385 + L2 LINE L2 3117 3272 0 286 327 96 0 chr17 4511213 4511369 -80927111 - L3b LINE CR1 -196 1387 1217 2439 97 3 0 chr17 4512575 4512884 -80925596 + AluSx SINE Alu 1 310 -2 383 192 0 67 chr17 4513625 4513818 -80924662 + (TGGG)n Simple_repeat Simple_repeat 1 180 0 258 95 0 0 chr17 4513979 4514021 -80924459 + (A)n Simple_repeat Simple_repeat 1 42 0 897 73 0 0 chr17 4514021 4514131 -80924349 - AluSq/x SINE Alu -202 110 1 1265 110 12 6 chr17 4514162 4514335 -80924145 + AluSg/x SINE Alu 138 311 -1 364 207 0 46 chr17 4514342 4514429 -80924051 - Tigger5 DNA MER2_type -2240 83 1 2130 124 0 3 chr17 4514842 4515165 -80923315 + AluSp SINE Alu 3 324 0 2430 99 0 0 chr17 4515566 4515879 -80922601 + AluSp SINE Alu 1 313 0 892 138 9 138 chr17 4515983 4516048 -80922432 - MER5A DNA MER1_type 0 189 117 2162 116 3 7 chr17 4516048 4516340 -80922140 + AluSx SINE Alu 1 291 -21 182 80 0 0 chr17 4516347 4516372 -80922108 + (CAAAA)n Simple_repeat Simple_repeat 1 25 0 892 138 9 138 chr17 4516372 4516515 -80921965 - MER5A DNA MER1_type -78 111 1 477 181 71 121 chr17 4516526 4516689 -80921791 + MER5B DNA MER1_type 4 159 -19 8094 53 2 15 chr17 4516689 4517668 -80920812 - LTR5 LTR ERVK -3 966 1 477 181 71 121 chr17 4517668 4517686 -80920794 + MER5B DNA MER1_type 159 176 -2 290 349 101 33 chr17 4517878 4518061 -80920419 - L2 LINE L2 -1968 1346 1132 2060 104 3 55 chr17 4518061 4518223 -80920257 - AluSg SINE Alu -17 293 153 2326 106 0 3 chr17 4518223 4518525 -80919955 - AluSg SINE Alu -3 307 7 2060 104 3 55 chr17 4518525 4518671 -80919809 - AluSg SINE Alu -157 153 1 290 349 101 33 chr17 4518671 4518794 -80919686 - L2 LINE L2 -2182 1132 1019 2214 80 0 32 chr17 4519154 4519466 -80919014 + AluSq SINE Alu 1 302 -11 2297 80 3 16 chr17 4519472 4519784 -80918696 + AluSp SINE Alu 1 308 -5 194 319 42 0 chr17 4519802 4519874 -80918606 - L2 LINE L2 -356 2958 2884 276 282 13 13 chr17 4521195 4521273 -80917207 - L2 LINE L2 -9 3263 3186 1584 134 90 43 chr17 4521301 4521578 -80916902 + AluJb SINE Alu 1 290 -22 2197 105 0 13 chr17 4521824 4522128 -80916352 + AluSx SINE Alu 1 300 -12 249 353 29 29 chr17 4522237 4522376 -80916104 - MLT1L LTR MaLR -287 328 190 608 199 12 53 chr17 4522516 4522687 -80915793 - Charlie2 DNA MER1_type -7 2855 2692 1425 98 36 22 chr17 4523164 4523389 -80915091 - AluY SINE Alu 0 311 84 435 324 28 28 chr17 4523464 4523643 -80914837 + Charlie2 DNA MER1_type 1 179 -2603 2104 115 0 16 chr17 4523644 4523981 -80914499 - AluY SINE Alu 0 311 3 86 103 0 0 chr17 4524061 4524333 -80914147 + GC_rich Low_complexity Low_complexity 1 272 0 329 234 120 53 chr17 4524563 4524710 -80913770 + L1M4 LINE L1 4469 4636 -1510 1990 101 8 0 chr17 4524710 4524967 -80913513 - AluSp SINE Alu -18 295 37 329 234 120 53 chr17 4524967 4525028 -80913452 + L1M4 LINE L1 4636 4691 -1455 2456 48 35 7 chr17 4525060 4525349 -80913131 + AluY SINE Alu 1 297 -14 1872 153 0 0 chr17 4525349 4525623 -80912857 - AluSx SINE Alu -37 275 1 302 289 13 0 chr17 4525795 4525871 -80912609 - LTR67 LTR ERVL -380 177 101 1937 108 0 0 chr17 4525945 4526196 -80912284 + AluSg SINE Alu 54 304 -6 602 319 72 17 chr17 4526260 4526552 -80911928 + L2 LINE L2 1121 1428 -1886 248 222 42 0 chr17 4526580 4526652 -80911828 + L2 LINE L2 1541 1615 -1699 1954 133 3 10 chr17 4526652 4526945 -80911535 - AluSg SINE Alu -19 291 1 399 138 0 0 chr17 4526983 4527041 -80911439 - AluS SINE Alu -250 58 1 * 663 240 58 0 chr17 4527041 4527192 -80911288 + MER20 DNA MER1_type 55 214 -5 2303 213 111 27 chr17 4527318 4527430 -80911050 - L1M4 LINE L1 -871 5275 5174 2285 116 6 0 chr17 4527430 4527741 -80910739 - AluSp SINE Alu 0 313 1 2303 213 111 27 chr17 4527741 4528216 -80910264 - L1M4 LINE L1 -972 5174 4609 2057 133 7 0 chr17 4528216 4528509 -80909971 + AluSq SINE Alu 1 295 -18 2303 213 111 27 chr17 4528509 4528671 -80909809 - L1M4 LINE L1 -1537 4609 4462 2435 96 0 0 chr17 4528673 4528976 -80909504 - AluSc SINE Alu -4 305 3 459 281 6 18 chr17 4528979 4529143 -80909337 - AluSq SINE Alu -5 308 147 264 217 103 69 chr17 4529509 4529684 -80908796 + Charlie7 DNA MER1_type 508 688 -1924 1365 169 110 0 chr17 4529827 4530063 -80908417 - AluJo SINE Alu -17 295 34 240 234 0 0 chr17 4530079 4530126 -80908354 + L2 LINE L2 3255 3301 -12 2361 99 0 3 chr17 4530128 4530431 -80908049 + AluSq SINE Alu 1 302 -11 2477 154 20 18 chr17 4530431 4530886 -80907594 + LTR62 LTR ERVK 262 717 -2 459 252 25 0 chr17 4531060 4531179 -80907301 - AluSq/x SINE Alu -189 123 2 1537 176 20 36 chr17 4531255 4531556 -80906924 - AluSx SINE Alu -16 296 1 330 257 37 37 chr17 4531677 4531786 -80906694 - MIR SINE MIR 0 262 154 2036 128 44 3 chr17 4531831 4532129 -80906351 - AluSg SINE Alu 0 310 1 2212 119 7 3 chr17 4532139 4532441 -80906039 - AluSx SINE Alu -9 303 1 2397 69 0 3 chr17 4532519 4532810 -80905670 + AluY SINE Alu 4 293 -18 197 302 32 0 chr17 4533167 4533230 -80905250 + L2 LINE L2 2714 2778 -536 2308 89 27 0 chr17 4533236 4533528 -80904952 + AluSx SINE Alu 1 300 -12 917 122 0 0 chr17 4534725 4534848 -80903632 + AluSq/x SINE Alu 11 133 -179 2344 100 0 0 chr17 4534851 4535160 -80903320 + AluY SINE Alu 1 309 -2 244 256 44 22 chr17 4535161 4535251 -80903229 + Charlie2 DNA MER1_type 219 310 -2552 1481 172 4 32 chr17 4535324 4535603 -80902877 - AluJb SINE Alu -24 288 18 275 246 111 40 chr17 4535611 4535737 -80902743 + Charlie2 DNA MER1_type 1931 2065 -797 2011 108 45 7 chr17 4536066 4536353 -80902127 + AluSp SINE Alu 1 298 -15 622 242 31 25 chr17 4536363 4536524 -80901956 - MER5B DNA MER1_type 0 178 17 2234 100 4 0 chr17 4536641 4536960 -80901520 - AluSx SINE Alu 0 320 1 2798 13 0 13 chr17 4537063 4537374 -80901106 - AluYa5 SINE Alu -4 307 1 2064 121 0 29 chr17 4537848 4538155 -80900325 - AluSx SINE Alu -14 298 1 2395 83 0 7 chr17 4538178 4538478 -80900002 - AluY SINE Alu -13 298 1 2522 77 0 3 chr17 4539533 4539845 -80898635 - AluY SINE Alu 0 311 1 1991 134 10 3 chr17 4539895 4540187 -80898293 - AluJo SINE Alu -9 303 10 639 256 152 61 chr17 4540332 4540793 -80897687 - LTR33 LTR ERVL -9 512 10 669 326 74 47 chr17 4540834 4541282 -80897198 + L2 LINE L2 2183 2642 -672 320 78 0 0 chr17 4541308 4541359 -80897121 - AluY SINE Alu -169 132 82 1549 107 9 5 chr17 4541359 4541575 -80896905 - AluY SINE Alu -94 217 1 860 269 70 60 chr17 4541945 4542443 -80896037 - MLT1J LTR MaLR -8 503 1 1627 181 0 21 chr17 4542502 4542790 -80895690 - AluJo SINE Alu -30 282 1 294 283 55 7 chr17 4543120 4543265 -80895215 + L1M4 LINE L1 4776 4927 -1219 1997 143 7 7 chr17 4543507 4543801 -80894679 - AluSx SINE Alu -13 299 6 802 117 23 8 chr17 4544083 4544211 -80894269 - AluJb SINE Alu -7 305 176 926 154 7 20 chr17 4546028 4546177 -80892303 - FRAM SINE Alu -12 164 18 743 203 0 8 chr17 4547089 4547207 -80891273 - FLAM_C SINE Alu -25 118 2 545 269 110 28 chr17 4547312 4547494 -80890986 + MIR3 SINE MIR 9 205 -3 579 224 165 72 chr17 4547551 4547648 -80890832 - MIR SINE MIR -2 260 173 452 184 39 0 chr17 4547648 4547751 -80890729 - L1MB8 LINE L1 0 6178 6072 579 224 165 72 chr17 4547751 4547890 -80890590 - MIR SINE MIR -89 173 2 2725 48 0 3 chr17 4551088 4551401 -80887079 + AluSx SINE Alu 1 312 0 1930 81 0 53 chr17 4551412 4551734 -80886746 + AluSg SINE Alu 5 309 -1 2441 91 0 3 chr17 4551891 4552199 -80886281 + AluSx SINE Alu 3 309 -3 2123 87 45 7 chr17 4552934 4553223 -80885257 + AluSp SINE Alu 2 301 -12 312 339 73 60 chr17 4553506 4553890 -80884590 + L2 LINE L2 2864 3252 -20 614 238 144 5 chr17 4553894 4554096 -80884384 - L1MEc LINE L1 -5955 441 212 1296 116 50 5 chr17 4554104 4554303 -80884177 + AluJb SINE Alu 1 208 -104 570 235 73 45 chr17 4554355 4554534 -80883946 - L1MEc LINE L1 -6174 222 39 1913 170 7 0 chr17 4554542 4554842 -80883638 - AluJb SINE Alu -10 302 1 2524 74 0 7 chr17 4555013 4555322 -80883158 - AluSq SINE Alu -2 311 5 27 0 0 0 chr17 4555332 4555359 -80883121 + AT_rich Low_complexity Low_complexity 1 27 0 451 312 57 6 chr17 4555532 4555689 -80882791 + MIR SINE MIR 24 188 -74 194 369 138 22 chr17 4556037 4556392 -80882088 + L2 LINE L2 2490 2885 -429 344 191 286 19 chr17 4556403 4556508 -80881972 - FLAM_A SINE Alu 0 133 1 366 244 0 52 chr17 4556509 4556624 -80881856 + MER63 DNA MER1_type 7 741 -321 542 176 29 114 chr17 4556767 4556840 -80881640 + LTR41 LTR ERVL 580 658 -115 1744 161 0 34 chr17 4556840 4557138 -80881342 - AluJb SINE Alu -24 288 1 2050 116 0 36 chr17 4557148 4557450 -80881030 - AluSx SINE Alu -21 291 1 542 176 29 114 chr17 4557450 4557575 -80880905 + LTR41 LTR ERVL 667 771 -2 818 162 0 22 chr17 4557636 4557772 -80880708 + FLAM_C SINE Alu 1 133 0 2414 61 14 3 chr17 4557872 4558169 -80880311 + AluY SINE Alu 1 300 -11 2191 109 0 10 chr17 4558181 4558483 -80879997 + AluSc SINE Alu 1 299 -10 2650 61 0 0 chr17 4560067 4560377 -80878103 + AluY SINE Alu 2 311 0 2149 95 20 10 chr17 4560503 4560797 -80877683 - AluSx SINE Alu -15 297 1 303 252 47 65 chr17 4560923 4561030 -80877450 + L1MDa LINE L1 1984 2088 -4452 265 208 56 14 chr17 4561668 4561740 -80876740 - MIR SINE MIR -75 187 113 232 83 83 21 chr17 4562042 4562090 -80876390 + LTR41 LTR ERVL 711 761 -12 2097 110 0 20 chr17 4562867 4563167 -80875313 - AluSx SINE Alu -18 294 1 1195 151 31 109 chr17 4563708 4564319 -80874161 - MER4C LTR ERV1 0 465 1 1466 131 17 37 chr17 4565429 4565726 -80872754 - AluY SINE Alu -1 310 20 226 121 0 0 chr17 4565765 4565798 -80872682 + Alu SINE Alu 92 124 -179 344 266 41 0 chr17 4565937 4566176 -80872304 + G-rich Low_complexity Low_complexity 1 248 0 296 204 58 29 chr17 4566180 4566352 -80872128 + (GTGTG)n Simple_repeat Simple_repeat 4 180 0 1865 106 4 34 chr17 4567784 4568049 -80870431 + AluSq SINE Alu 1 257 -56 2537 68 0 0 chr17 4568064 4568360 -80870120 + AluY SINE Alu 1 296 -15 2355 68 41 0 chr17 4568360 4568655 -80869825 + AluY SINE Alu 1 307 -4 1424 124 0 16 chr17 4568655 4568849 -80869631 + AluSq SINE Alu 108 298 -15 2206 123 0 3 chr17 4570318 4570627 -80867853 - AluSx SINE Alu -4 308 1 1596 107 0 30 chr17 4571317 4571550 -80866930 - AluSg/x SINE Alu 0 312 87 2376 80 0 0 chr17 4572389 4572675 -80865805 + AluSq SINE Alu 25 310 -3 2245 119 3 0 chr17 4574357 4574659 -80863821 - AluSx SINE Alu -9 303 1 905 173 33 75 chr17 4575058 4575232 -80863248 + MIR SINE MIR 23 188 -74 2423 83 3 0 chr17 4575232 4575532 -80862948 + AluSx SINE Alu 1 301 -11 905 173 33 75 chr17 4575532 4575571 -80862909 + MIR SINE MIR 188 227 -35 1818 179 3 10 chr17 4575614 4575916 -80862564 + AluJo SINE Alu 5 304 -8 551 302 148 0 chr17 4576435 4576637 -80861843 + MIR SINE MIR 27 258 -4 2319 81 3 0 chr17 4576640 4576948 -80861532 - AluSx SINE Alu 0 309 1 2436 81 3 0 chr17 4576977 4577274 -80861206 + AluSp SINE Alu 1 298 -15 2386 82 0 3 chr17 4577301 4577593 -80860887 + AluSq SINE Alu 1 291 -22 212 303 13 13 chr17 4577744 4577820 -80860660 + L2 LINE L2 3016 3091 -181 2362 66 0 10 chr17 4578008 4578322 -80860158 + AluSx SINE Alu 1 311 0 1817 136 13 46 chr17 4578462 4578764 -80859716 + AluJo SINE Alu 1 292 -20 351 234 85 11 chr17 4578874 4578968 -80859512 + L2 LINE L2 3182 3282 -31 2404 86 0 3 chr17 4579045 4579346 -80859134 + AluSc SINE Alu 1 300 -9 186 296 155 0 chr17 4579346 4579417 -80859063 - MIR SINE MIR -116 146 65 1095 204 13 22 chr17 4579417 4579648 -80858832 + AluJo SINE Alu 71 299 -13 2180 75 4 4 chr17 4579654 4579966 -80858514 + AluY SINE Alu 4 315 0 978 141 0 0 chr17 4579998 4580140 -80858340 - AluJb SINE Alu -3 309 168 832 176 8 0 chr17 4580227 4580358 -80858122 + FLAM_C SINE Alu 1 132 -1 2052 113 7 39 chr17 4580377 4580687 -80857793 + AluSx SINE Alu 1 300 -12 2737 172 62 26 chr17 4580690 4580831 -80857649 - L1MA4 LINE L1 -11 6289 6155 2270 125 0 0 chr17 4580831 4581136 -80857344 - AluSx SINE Alu -7 305 1 2737 172 62 26 chr17 4581136 4581603 -80856877 - L1MA4 LINE L1 -145 6155 5659 1099 168 0 22 chr17 4581597 4581776 -80856704 - AluJb SINE Alu -4 308 134 * 1239 169 15 140 chr17 4581604 4581776 -80856704 - AluJo SINE Alu -1 301 109 198 0 0 0 chr17 4581776 4581798 -80856682 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2278 81 0 3 chr17 4581798 4582083 -80856397 - AluY SINE Alu -27 284 1 1239 169 15 140 chr17 4582083 4582297 -80856183 - AluJo SINE Alu -191 111 2 1699 148 10 30 chr17 4582086 4582105 -80856375 - AluJb SINE Alu 0 312 294 415 0 0 0 chr17 4582105 4582151 -80856329 + (TTTA)n Simple_repeat Simple_repeat 2 120 0 1699 148 10 30 chr17 4582151 4582435 -80856045 - AluJb SINE Alu -18 294 2 987 144 0 0 chr17 4582435 4582608 -80855872 - L1MA4 LINE L1 -634 5666 5494 313 128 0 169 chr17 4582609 4582761 -80855719 - Alu SINE Alu 0 302 236 2286 84 0 16 chr17 4582761 4583070 -80855410 - AluY SINE Alu -7 304 1 189 0 0 0 chr17 4583072 4583093 -80855387 + (T)n Simple_repeat Simple_repeat 1 21 0 804 140 0 44 chr17 4583100 4583236 -80855244 - AluJb SINE Alu -182 130 1 443 99 33 0 chr17 4583236 4583327 -80855153 - L1MA4 LINE L1 -812 5488 5395 3762 152 18 47 chr17 4583334 4583401 -80855079 - L1MB7 LINE L1 0 6184 6117 2112 137 0 6 chr17 4583401 4583714 -80854766 + AluJb SINE Alu 1 311 -1 3762 152 18 47 chr17 4583714 4584034 -80854446 - L1MB7 LINE L1 -67 6117 5825 1574 170 0 74 chr17 4584034 4584370 -80854110 - AluJo SINE Alu -1 311 1 3762 152 18 47 chr17 4584370 4584711 -80853769 - L1MB7 LINE L1 -359 5825 5476 720 155 0 0 chr17 4584730 4584833 -80853647 - FRAM SINE Alu -37 139 37 481 95 0 0 chr17 4584833 4584907 -80853573 + L1M4 LINE L1 5415 5488 -690 2022 128 7 3 chr17 4584907 4585205 -80853275 + AluSx SINE Alu 1 299 -13 848 142 8 0 chr17 4585215 4585349 -80853131 + AluJ SINE Alu 1 135 -177 2172 99 14 3 chr17 4585349 4585642 -80852838 + AluSg SINE Alu 1 296 -14 2061 141 0 3 chr17 4586465 4586778 -80851702 - AluSx SINE Alu 0 312 1 241 294 76 22 chr17 4586798 4586890 -80851590 - MIR3 SINE MIR -52 156 60 184 311 54 27 chr17 4588012 4588086 -80850394 + MIR3 SINE MIR 110 185 -23 829 216 6 0 chr17 4588184 4588346 -80850134 + AluJ SINE Alu 134 296 -16 2132 111 7 0 chr17 4588349 4588646 -80849834 + AluSp SINE Alu 1 299 -14 2074 128 0 0 chr17 4588655 4588953 -80849527 - AluY SINE Alu -13 298 1 1906 151 7 3 chr17 4589667 4589966 -80848514 + AluJo SINE Alu 4 303 -9 365 345 14 20 chr17 4590443 4590591 -80847889 - MIR SINE MIR 0 262 116 2589 43 0 0 chr17 4590665 4590968 -80847512 - AluY SINE Alu -8 303 1 2053 107 40 3 chr17 4593146 4593445 -80845035 - AluSx SINE Alu -2 310 1 2348 58 0 3 chr17 4593476 4593768 -80844712 + AluY SINE Alu 1 291 -20 1140 259 22 13 chr17 4595438 4595697 -80842783 - MER58B DNA MER1_type -2079 341 77 2325 95 0 0 chr17 4595697 4596001 -80842479 + AluSx SINE Alu 1 304 -8 1140 259 22 13 chr17 4596001 4596054 -80842426 - MER58B DNA MER1_type -2343 77 26 2292 87 0 3 chr17 4596064 4596362 -80842118 - AluSg SINE Alu -13 297 1 2203 87 0 31 chr17 4596375 4596696 -80841784 - AluY SINE Alu 0 311 1 928 95 0 29 chr17 4596888 4597025 -80841455 - AluSq/x SINE Alu -180 133 1 246 32 0 0 chr17 4600529 4600560 -80837920 + (CAG)n Simple_repeat Simple_repeat 1 31 0 2116 85 0 0 chr17 4600815 4601086 -80837394 + AluSx SINE Alu 24 294 -18 1988 113 23 17 chr17 4601211 4601513 -80836967 + AluSg SINE Alu 1 304 -6 2267 71 3 22 chr17 4601547 4601858 -80836622 - AluSp SINE Alu -8 305 1 271 295 0 0 chr17 4602502 4602607 -80835873 + (CAG)n Simple_repeat Simple_repeat 1 105 0 330 301 9 44 chr17 4602641 4602900 -80835580 + CT-rich Low_complexity Low_complexity 1 249 0 275 293 20 14 chr17 4602931 4603078 -80835402 + CT-rich Low_complexity Low_complexity 1 148 0 309 100 0 0 chr17 4603464 4603514 -80834966 + (CAG)n Simple_repeat Simple_repeat 3 52 0 297 75 0 0 chr17 4604044 4604084 -80834396 + (CA)n Simple_repeat Simple_repeat 2 41 0 321 309 118 22 chr17 4604814 4604950 -80833530 + MIR SINE MIR 40 188 -74 321 341 40 8 chr17 4607659 4607785 -80830695 - MIR SINE MIR -59 149 20 21 0 0 0 chr17 4612018 4612039 -80826441 + GC_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr17 4612169 4612209 -80826271 + GC_rich Low_complexity Low_complexity 1 40 0 2223 76 0 7 chr17 4616727 4617015 -80821465 - AluSc SINE Alu -23 286 1 969 159 0 69 chr17 4617031 4617220 -80821260 - FRAM SINE Alu 0 176 1 397 231 58 70 chr17 4617222 4617378 -80821102 - MER5A DNA MER1_type 0 189 36 217 217 43 0 chr17 4617627 4617673 -80820807 - MIR SINE MIR -92 170 123 1680 133 13 53 chr17 4618125 4618426 -80820054 + AluJo SINE Alu 1 289 -23 2304 88 0 3 chr17 4618436 4618733 -80819747 + AluSx SINE Alu 1 296 -16 687 138 0 4 chr17 4619327 4619467 -80819013 + L1M LINE L1 5278 5413 -741 584 159 0 37 chr17 4619469 4619576 -80818904 + FLAM_A SINE Alu 40 142 0 337 179 13 0 chr17 4619582 4619660 -80818820 + AluSp/q SINE Alu 225 303 0 2727 88 21 0 chr17 4619663 4620093 -80818387 + L1MA1 LINE L1 5755 6193 -109 2425 45 3 16 chr17 4620140 4620449 -80818031 + AluY SINE Alu 1 305 -6 954 133 0 0 chr17 4620618 4620753 -80817727 + AluSq/x SINE Alu 1 135 -177 1927 112 24 7 chr17 4620753 4621049 -80817431 + AluSg SINE Alu 1 301 -9 887 131 0 5 chr17 4621536 4621941 -80816539 + (CA)n Simple_repeat Simple_repeat 1 402 0 1987 93 29 0 chr17 4622227 4622507 -80815973 - AluSx SINE Alu -11 301 14 260 207 52 60 chr17 4622628 4622744 -80815736 + MLT1K LTR MaLR 188 302 -286 2517 44 0 0 chr17 4623005 4623303 -80815177 + AluY SINE Alu 5 302 -9 982 154 5 53 chr17 4623303 4623491 -80814989 + AluSg/x SINE Alu 132 310 0 839 183 0 0 chr17 4623505 4623647 -80814833 + FLAM_C SINE Alu 1 142 -1 670 91 0 0 chr17 4623670 4623758 -80814722 + AluS SINE Alu 1 88 -225 188 143 24 0 chr17 4624200 4624242 -80814238 + GA-rich Low_complexity Low_complexity 5 47 0 2248 106 3 0 chr17 4624398 4624709 -80813771 + AluSx SINE Alu 1 312 0 2347 88 3 0 chr17 4625037 4625343 -80813137 + AluSx SINE Alu 1 307 -5 1240 174 9 30 chr17 4625355 4625585 -80812895 - AluJo SINE Alu -46 266 42 2041 114 16 7 chr17 4625699 4626005 -80812475 - AluSc SINE Alu 0 309 1 1970 115 61 0 chr17 4626020 4626315 -80812165 - AluSp SINE Alu 0 313 1 671 148 16 41 chr17 4626355 4626477 -80812003 + FLAM_C SINE Alu 11 129 -14 2078 115 27 0 chr17 4626508 4626803 -80811677 + AluSx SINE Alu 1 303 -9 1610 179 18 4 chr17 4627360 4627670 -80810810 - AluJb SINE Alu 0 314 1 2072 117 3 0 chr17 4627682 4627997 -80810483 - AluSx SINE Alu 0 316 1 1818 145 0 26 chr17 4628000 4628310 -80810170 - AluSx SINE Alu -10 302 1 241 216 39 0 chr17 4628325 4628376 -80810104 - MER66B LTR ERV1 -143 343 291 2551 203 71 50 chr17 4628410 4628452 -80810028 + L1MC4 LINE L1 7181 7221 -821 2129 81 7 42 chr17 4628452 4628760 -80809720 + AluSq SINE Alu 1 297 -16 2551 203 71 50 chr17 4628760 4629560 -80808920 + L1MC4 LINE L1 7221 8041 -1 1573 180 13 28 chr17 4629632 4629949 -80808531 - AluJb SINE Alu 0 312 1 255 275 72 14 chr17 4629969 4630107 -80808373 + L1ME LINE L1 5727 5872 -298 1615 148 35 4 chr17 4630109 4630365 -80808115 + AluSx SINE Alu 1 264 -48 1345 161 17 25 chr17 4630810 4630879 -80807601 + AluJo SINE Alu 52 120 -196 2221 101 0 0 chr17 4630879 4631176 -80807304 - AluSq SINE Alu -16 297 1 1345 161 17 25 chr17 4631176 4631373 -80807107 + AluJo SINE Alu 120 316 0 632 330 87 78 chr17 4631488 4631560 -80806920 + L1MEc LINE L1 2242 2312 -3903 2069 113 3 0 chr17 4631560 4631843 -80806637 + AluSx SINE Alu 1 284 -28 933 67 8 0 chr17 4631723 4631843 -80806637 + AluSg/x SINE Alu 162 317 0 316 0 0 0 chr17 4631843 4631878 -80806602 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 632 330 87 78 chr17 4631878 4631942 -80806538 + L1MEc LINE L1 2312 2374 -3841 2127 85 41 10 chr17 4631942 4632236 -80806244 + AluSq SINE Alu 3 305 -8 632 330 87 78 chr17 4632236 4632404 -80806076 + L1MEc LINE L1 2374 2510 -3705 1396 224 94 34 chr17 4632404 4632875 -80805605 + MLT1D LTR MaLR 1 386 -4 536 343 29 0 chr17 4632880 4633055 -80805425 + L1MEc LINE L1 2504 2683 -3532 1605 173 61 0 chr17 4633133 4633411 -80805069 + AluJb SINE Alu 1 295 -17 933 129 58 7 chr17 4633448 4633603 -80804877 + AluJb SINE Alu 114 276 -36 1399 173 24 45 chr17 4633603 4633624 -80804856 - MLT2D LTR ERVL -25 389 369 183 100 0 0 chr17 4633624 4633654 -80804826 + (CA)n Simple_repeat Simple_repeat 2 31 0 1399 173 24 45 chr17 4633654 4633967 -80804513 - MLT2D LTR ERVL -45 369 62 1047 177 21 0 chr17 4633987 4634173 -80804307 - AluSg/x SINE Alu -1 311 122 455 142 19 47 chr17 4634173 4634279 -80804201 - L1MDa LINE L1 -6437 103 1 554 143 0 0 chr17 4634286 4634377 -80804103 - FLAM_C SINE Alu -2 141 51 421 93 0 53 chr17 4634439 4634514 -80803966 + MLT2C2 LTR ERVL 1 71 -393 1973 143 20 0 chr17 4634514 4634814 -80803666 + AluSx SINE Alu 1 306 -6 919 115 0 8 chr17 4634822 4634952 -80803528 + AluSq/x SINE Alu 1 129 -184 2291 97 7 0 chr17 4634953 4635263 -80803217 + AluSx SINE Alu 1 312 0 1172 150 0 0 chr17 4635320 4635500 -80802980 - AluSq SINE Alu 0 313 134 1457 159 29 84 chr17 4635500 4635657 -80802823 - AluJo SINE Alu -10 302 169 2500 52 0 13 chr17 4635657 4635964 -80802516 + AluY SINE Alu 1 303 -8 1457 159 29 84 chr17 4635964 4636115 -80802365 - AluJo SINE Alu -143 169 11 2007 184 8 31 chr17 4636140 4636265 -80802215 - L1PB4 LINE L1 0 6156 6030 2138 95 27 0 chr17 4636265 4636559 -80801921 - AluSx SINE Alu -10 302 1 2007 184 8 31 chr17 4636559 4636814 -80801666 - L1PB4 LINE L1 -126 6030 5785 2316 102 0 6 chr17 4636830 4637144 -80801336 - AluSx SINE Alu 0 312 1 858 171 0 38 chr17 4637155 4637313 -80801167 - FRAM SINE Alu -24 152 1 232 103 0 0 chr17 4637315 4637354 -80801126 - L1PB4 LINE L1 -522 5780 5742 2246 90 3 3 chr17 4637781 4638080 -80800400 - AluSc SINE Alu -9 300 2 2857 9 0 0 chr17 4638098 4638416 -80800064 - AluYb8 SINE Alu 0 318 1 1825 136 3 53 chr17 4638448 4638820 -80799660 + AluJb SINE Alu 5 360 0 2160 76 9 54 chr17 4638843 4639159 -80799321 + AluSx SINE Alu 1 302 -10 4818 96 0 85 chr17 4639475 4639920 -80798560 - LTR8 LTR ERV1 -1 690 334 2305 85 7 0 chr17 4639920 4640227 -80798253 - AluSx SINE Alu -1 311 3 4818 96 0 85 chr17 4640227 4640535 -80797945 - LTR8 LTR ERV1 -357 334 1 845 167 0 0 chr17 4640563 4640701 -80797779 - AluJb SINE Alu -6 306 169 1523 171 4 29 chr17 4640701 4640981 -80797499 + AluJb SINE Alu 40 312 0 2516 40 0 10 chr17 4641014 4641316 -80797164 - AluY SINE Alu -12 299 1 268 268 80 62 chr17 4641317 4641541 -80796939 + L1 LINE L1 3526 3753 -2393 1941 117 4 0 chr17 4641541 4641814 -80796666 + AluSp SINE Alu 1 274 -39 1185 124 119 0 chr17 4641815 4642017 -80796463 + AluSc SINE Alu 71 296 -13 968 278 27 113 chr17 4642340 4642607 -80795873 - L2 LINE L2 -196 3076 2788 1956 127 3 7 chr17 4642607 4642907 -80795573 - AluSq SINE Alu -14 299 1 968 278 27 113 chr17 4642907 4643062 -80795418 - L2 LINE L2 -484 2788 2621 1564 157 7 18 chr17 4643062 4643336 -80795144 + AluJo SINE Alu 1 271 -41 1629 103 0 4 chr17 4643338 4643570 -80794910 + AluSg/x SINE Alu 81 311 -1 968 278 27 113 chr17 4643570 4644075 -80794405 - L2 LINE L2 -652 2620 2152 1058 106 0 0 chr17 4644076 4644217 -80794263 + AluSq/x SINE Alu 2 142 -171 483 323 127 26 chr17 4644220 4644618 -80793862 - L2 LINE L2 -1160 2154 1709 2226 71 17 14 chr17 4644618 4644913 -80793567 - AluSp SINE Alu -17 296 1 483 323 127 26 chr17 4644913 4644941 -80793539 - L2 LINE L2 -1605 1709 1685 207 280 60 24 chr17 4646604 4646772 -80791708 + (CCCCAA)n Simple_repeat Simple_repeat 3 176 0 337 313 43 0 chr17 4647633 4647796 -80790684 + L1ME4a LINE L1 5950 6119 -2 2255 108 0 0 chr17 4647802 4648109 -80790371 + AluSx SINE Alu 1 307 -5 1720 163 3 3 chr17 4648114 4648403 -80790077 + AluJb SINE Alu 1 289 -23 248 286 0 16 chr17 4653943 4654006 -80784474 + CT-rich Low_complexity Low_complexity 4 65 0 400 263 76 35 chr17 4654233 4654404 -80784076 + MIR SINE MIR 68 245 -17 229 62 0 0 chr17 4654459 4654491 -80783989 + Alu SINE Alu 1 32 -268 1672 112 0 0 chr17 4654491 4654723 -80783757 + AluSg/x SINE Alu 74 305 -5 687 117 0 100 chr17 4656395 4656515 -80781965 + AluJb SINE Alu 1 108 -204 1524 187 11 0 chr17 4656520 4656798 -80781682 + AluJb SINE Alu 27 307 -5 193 303 131 7 chr17 4659171 4659316 -80779164 - MIR3 SINE MIR -21 187 25 22 56 0 0 chr17 4660757 4660793 -80777687 + GC_rich Low_complexity Low_complexity 1 36 0 23 78 0 0 chr17 4661743 4661794 -80776686 + GC_rich Low_complexity Low_complexity 1 51 0 258 238 33 25 chr17 4662769 4662891 -80775589 + G-rich Low_complexity Low_complexity 2 124 0 1989 104 7 31 chr17 4664953 4665125 -80773355 - AluSx SINE Alu 0 305 142 2276 32 72 0 chr17 4665125 4665404 -80773076 - AluY SINE Alu -12 299 1 1989 104 7 31 chr17 4665404 4665543 -80772937 - AluSx SINE Alu -163 142 1 230 250 107 0 chr17 4666252 4666336 -80772144 - L2 LINE L2 -5 3267 3175 1055 194 38 13 chr17 4667070 4667307 -80771173 + MIR SINE MIR 19 261 -1 476 219 64 97 chr17 4667301 4667414 -80771066 - MIR SINE MIR -27 235 130 * 2153 79 59 0 chr17 4667414 4667704 -80770776 + AluSg SINE Alu 1 307 -3 476 219 64 97 chr17 4667704 4667807 -80770673 - MIR SINE MIR -132 130 25 591 64 86 0 chr17 4668567 4668707 -80769773 + (TCTCTG)n Simple_repeat Simple_repeat 1 152 0 1122 148 0 0 chr17 4670161 4670337 -80768143 + FRAM SINE Alu 1 175 -1 2498 58 3 3 chr17 4670565 4670874 -80767606 + AluSp SINE Alu 1 309 -4 738 310 15 5 chr17 4670889 4671089 -80767391 - MIR SINE MIR -42 220 19 1593 150 27 60 chr17 4671093 4671393 -80767087 - AluJo SINE Alu -22 290 1 817 165 15 0 chr17 4671393 4671526 -80766954 - AluJo SINE Alu -177 135 1 2194 111 0 3 chr17 4671567 4671873 -80766607 + AluSx SINE Alu 1 305 -7 274 323 54 31 chr17 4673755 4673794 -80764686 - L2 LINE L2 -3 3269 3232 1759 118 56 59 chr17 4673794 4673957 -80764523 - MER44D DNA MER2_type -1883 608 446 2304 84 7 0 chr17 4673957 4674254 -80764226 + AluSq SINE Alu 1 299 -14 2335 76 0 32 chr17 4674255 4674570 -80763910 + AluY SINE Alu 1 305 -6 1759 118 56 59 chr17 4674570 4674743 -80763737 - MER44D DNA MER2_type -2044 447 1 274 323 54 31 chr17 4674743 4674833 -80763647 - L2 LINE L2 -40 3232 3137 2223 103 0 3 chr17 4674896 4675196 -80763284 - AluSx SINE Alu -13 299 1 1139 164 5 55 chr17 4675198 4675417 -80763063 - AluJb SINE Alu -21 291 84 338 102 17 0 chr17 4675425 4675484 -80762996 - AluSg SINE Alu 0 301 242 1032 85 0 0 chr17 4675487 4675616 -80762864 - AluSg SINE Alu -168 142 14 798 229 40 63 chr17 4675623 4675846 -80762634 - AluJo SINE Alu -92 220 3 1367 165 189 0 chr17 4675892 4676146 -80762334 + AluJo SINE Alu 1 302 0 187 286 0 0 chr17 4676166 4676215 -80762265 - L2 LINE L2 -75 3238 3190 2446 79 0 0 chr17 4676233 4676538 -80761942 - AluSg SINE Alu -5 305 1 460 188 47 0 chr17 4676784 4676869 -80761611 + AluJ/FLAM SINE Alu 3 91 -221 2535 52 0 0 chr17 4677137 4677442 -80761038 - AluY SINE Alu -6 305 1 2053 94 3 14 chr17 4677520 4677684 -80760796 - AluSx SINE Alu -14 298 137 2322 87 0 10 chr17 4677684 4677994 -80760486 - AluSp SINE Alu -6 307 1 2053 94 3 14 chr17 4677994 4678117 -80760363 - AluSx SINE Alu -175 137 14 215 214 36 0 chr17 4678138 4678194 -80760286 + L2 LINE L2 2926 2983 -289 290 276 69 26 chr17 4678296 4678412 -80760068 + L2 LINE L2 3168 3288 -25 1667 155 10 39 chr17 4678441 4678608 -80759872 - AluJb SINE Alu -12 300 130 384 22 0 0 chr17 4678608 4678653 -80759827 + (TTTA)n Simple_repeat Simple_repeat 4 48 0 2174 64 0 0 chr17 4678653 4678919 -80759561 - AluSc SINE Alu -30 279 14 1667 155 10 39 chr17 4678919 4679059 -80759421 - AluJb SINE Alu -180 132 1 333 269 48 58 chr17 4679112 4679216 -80759264 + MIR SINE MIR 4 106 -156 1520 171 45 21 chr17 4684140 4684426 -80754054 - AluJo SINE Alu -19 293 1 1990 148 7 0 chr17 4684466 4684770 -80753710 - AluSx SINE Alu -6 306 1 302 383 82 27 chr17 4687999 4688255 -80750225 + L1M4c LINE L1 935 1204 -5180 266 243 66 44 chr17 4688735 4688788 -80749692 + L1ME4a LINE L1 5983 6033 -88 2349 90 0 0 chr17 4688788 4689087 -80749393 - AluSx SINE Alu -13 299 1 266 243 66 44 chr17 4689087 4689169 -80749311 + L1ME4a LINE L1 6033 6121 0 2128 122 0 6 chr17 4689198 4689510 -80748970 + AluSx SINE Alu 1 310 -2 1101 178 66 5 chr17 4690652 4690849 -80747631 + MER3 DNA MER1_type 1 209 0 384 347 18 24 chr17 4690955 4691125 -80747355 - MIR3 SINE MIR -23 185 17 334 299 0 11 chr17 4691464 4691551 -80746929 - L2 LINE L2 0 3272 3187 539 327 125 11 chr17 4691576 4691857 -80746623 - L3 LINE CR1 -74 1503 1191 2448 68 10 0 chr17 4692010 4692319 -80746161 + AluSq SINE Alu 1 312 -1 216 163 0 0 chr17 4692685 4692728 -80745752 + G-rich Low_complexity Low_complexity 5 47 0 2319 71 3 10 chr17 4696067 4696364 -80742116 - AluSq SINE Alu -16 297 3 2153 124 0 0 chr17 4696366 4696665 -80741815 - AluSx SINE Alu -13 299 1 2283 68 0 0 chr17 4696724 4697030 -80741450 - AluY SINE Alu 0 307 2 2245 87 7 0 chr17 4697520 4697818 -80740662 + AluSg SINE Alu 1 300 -10 1250 88 0 0 chr17 4697818 4697977 -80740503 + AluSp SINE Alu 134 292 -21 428 360 7 7 chr17 4697980 4698133 -80740347 + MIR SINE MIR 89 241 -21 2291 100 0 0 chr17 4698204 4698505 -80739975 - AluSx SINE Alu -11 301 1 957 90 298 6 chr17 4703297 4703381 -80735099 + MER30 DNA MER1_type 1 59 -171 2288 76 0 16 chr17 4703381 4703685 -80734795 + AluSq SINE Alu 1 299 -14 2281 89 10 0 chr17 4703695 4703999 -80734481 - AluSq SINE Alu -6 307 1 957 90 298 6 chr17 4703999 4704081 -80734399 + MER30 DNA MER1_type 65 230 0 905 284 251 15 chr17 4704289 4704807 -80733673 + L2 LINE L2 2057 2696 -618 467 240 34 17 chr17 4704812 4704991 -80733489 + L1MC5 LINE L1 7744 7925 -36 2049 123 10 7 chr17 4705063 4705365 -80733115 - AluJo SINE Alu -9 303 1 288 77 0 0 chr17 4705398 4705437 -80733043 + (TCCCC)n Simple_repeat Simple_repeat 4 42 0 191 105 53 0 chr17 4705444 4705482 -80732998 + CT-rich Low_complexity Low_complexity 1 40 0 874 220 0 0 chr17 4705496 4705655 -80732825 - FRAM SINE Alu -17 159 1 2231 107 0 0 chr17 4705661 4705961 -80732519 - AluSq SINE Alu -13 300 1 2247 94 7 0 chr17 4705961 4706259 -80732221 - AluSp SINE Alu -13 300 1 2296 65 3 3 chr17 4706259 4706549 -80731931 - AluY SINE Alu -21 290 1 2389 89 0 0 chr17 4706549 4706853 -80731627 - AluSx SINE Alu -8 304 1 605 271 90 0 chr17 4706855 4707043 -80731437 + L2 LINE L2 3109 3313 0 2390 89 0 0 chr17 4707291 4707595 -80730885 + AluSg SINE Alu 1 304 -6 2135 105 7 0 chr17 4707705 4707999 -80730481 + AluSx SINE Alu 1 296 -16 831 152 0 23 chr17 4708294 4708426 -80730054 + AluJo/FLAM SINE Alu 1 129 -173 2402 86 0 3 chr17 4708429 4708742 -80729738 + AluSp SINE Alu 1 312 -1 1672 151 37 27 chr17 4708884 4709182 -80729298 + AluJb SINE Alu 1 301 -11 2211 75 51 0 chr17 4709182 4709476 -80729004 + AluSx SINE Alu 1 310 -2 227 283 7 36 chr17 4710650 4710788 -80727692 + C-rich Low_complexity Low_complexity 1 134 0 26 50 0 0 chr17 4710798 4710838 -80727642 + GC_rich Low_complexity Low_complexity 1 40 0 223 333 11 11 chr17 4714369 4714459 -80724021 + MIR3 SINE MIR 3 92 -116 488 298 136 5 chr17 4714574 4714772 -80723708 + MIR SINE MIR 4 227 -35 426 296 84 28 chr17 4714963 4715142 -80723338 + MIR SINE MIR 33 221 -41 2223 98 0 31 chr17 4715810 4716128 -80722352 - AluSx SINE Alu -4 308 1 528 325 211 12 chr17 4717903 4718509 -80719971 + L3 LINE CR1 652 1378 -199 1478 92 0 0 chr17 4718509 4718704 -80719776 - AluSc SINE Alu -12 297 103 2193 96 3 0 chr17 4718706 4718997 -80719483 + AluSx SINE Alu 1 292 -20 700 156 18 0 chr17 4719007 4719116 -80719364 - AluSq/x SINE Alu -201 111 1 2211 89 10 0 chr17 4719126 4719417 -80719063 - AluSx SINE Alu -18 294 1 467 333 41 31 chr17 4719423 4719618 -80718862 + L3 LINE CR1 1374 1570 -7 194 347 0 0 chr17 4720791 4720866 -80717614 - L2 LINE L2 -227 3045 2971 203 254 15 60 chr17 4720917 4720984 -80717496 + L2 LINE L2 3249 3312 -1 2009 129 3 3 chr17 4721965 4722259 -80716221 - AluSg SINE Alu -16 294 1 2302 86 3 0 chr17 4722288 4722589 -80715891 + AluY SINE Alu 1 302 -9 1995 134 3 3 chr17 4722708 4723007 -80715473 - AluSx SINE Alu -13 299 1 601 257 87 52 chr17 4723022 4723248 -80715232 - L1MC4a LINE L1 -302 5819 5597 2461 38 3 0 chr17 4723248 4723539 -80714941 + AluY SINE Alu 1 292 -19 601 257 87 52 chr17 4723539 4723584 -80714896 - L1MC4a LINE L1 -524 5597 5555 1328 81 0 0 chr17 4723594 4723766 -80714714 - AluY SINE Alu -14 297 126 483 277 43 5 chr17 4723771 4723959 -80714521 - L1MC4a LINE L1 -2252 5556 5362 654 246 129 26 chr17 4727282 4727514 -80710966 + MIR SINE MIR 4 259 -3 2326 83 3 6 chr17 4728051 4728365 -80710115 - AluSp SINE Alu 0 313 1 2257 93 7 13 chr17 4728365 4728674 -80709806 - AluSx SINE Alu -1 311 4 1957 94 80 0 chr17 4728922 4729197 -80709283 - AluSx SINE Alu -15 297 1 1118 74 0 0 chr17 4729197 4729332 -80709148 - AluSg SINE Alu -175 135 1 2163 105 7 7 chr17 4729408 4729704 -80708776 + AluSx SINE Alu 6 301 -11 2470 45 3 16 chr17 4730072 4730384 -80708096 - AluY SINE Alu -3 308 1 398 277 53 71 chr17 4730472 4730654 -80707826 - MIR SINE MIR -30 178 1 2080 154 0 0 chr17 4730750 4731062 -80707418 - AluJb SINE Alu 0 312 1 393 302 18 62 chr17 4731124 4731166 -80707314 + L2 LINE L2 3099 3141 -172 2041 76 6 111 chr17 4731166 4731509 -80706971 + AluSp SINE Alu 1 307 -6 393 302 18 62 chr17 4731509 4731691 -80706789 + L2 LINE L2 3141 3313 0 222 309 52 41 chr17 4732174 4732271 -80706209 + L2 LINE L2 3161 3258 -14 235 282 28 0 chr17 4733867 4733938 -80704542 + MER113 DNA MER1_type? 7 79 -442 2249 85 10 10 chr17 4733951 4734257 -80704223 - AluSx SINE Alu -6 306 1 1723 159 3 10 chr17 4734263 4734558 -80703922 - AluJo SINE Alu -14 298 6 260 321 291 0 chr17 4734604 4734769 -80703711 - MIR SINE MIR -4 258 46 492 288 82 6 chr17 4735629 4735799 -80702681 + MER5A DNA MER1_type 7 189 0 2183 80 3 23 chr17 4735814 4736114 -80702366 - AluSc SINE Alu -15 294 1 310 302 19 44 chr17 4737528 4737687 -80700793 - L1ME3 LINE L1 -2 6160 6006 1394 114 144 23 chr17 4737718 4737981 -80700499 - AluSx SINE Alu -17 295 1 2146 73 7 23 chr17 4738343 4738645 -80699835 + AluY SINE Alu 1 297 -14 301 333 66 44 chr17 4739337 4739550 -80698930 + L1M4 LINE L1 3073 3293 -2853 1486 159 97 21 chr17 4739550 4739840 -80698640 + AluJo SINE Alu 1 312 0 301 333 66 44 chr17 4739840 4739854 -80698626 + L1M4 LINE L1 3293 3305 -2841 1000 77 14 43 chr17 4739883 4740092 -80698388 - AluSc SINE Alu -15 294 1 560 187 93 0 chr17 4740131 4740238 -80698242 + MLT1B LTR MaLR 1 117 -273 1673 88 0 4 chr17 4740239 4740467 -80698013 + AluSp SINE Alu 87 313 0 1617 194 0 3 chr17 4741223 4741516 -80696964 + AluJo SINE Alu 11 302 -10 1849 137 6 16 chr17 4741762 4742077 -80696403 + AluSx SINE Alu 1 312 0 652 144 0 45 chr17 4742157 4742268 -80696212 + AluSq/x SINE Alu 2 107 -205 2161 82 0 23 chr17 4742838 4743142 -80695338 + AluY SINE Alu 1 297 -14 1609 154 34 17 chr17 4743779 4744077 -80694403 + AluJb SINE Alu 1 303 -9 765 155 14 63 chr17 4744123 4744265 -80694215 + AluJo SINE Alu 2 136 -176 366 246 45 128 chr17 4744347 4744434 -80694046 - MIR SINE MIR -52 210 117 1989 107 0 17 chr17 4744434 4744753 -80693727 - AluSx SINE Alu 0 314 1 680 195 31 8 chr17 4744755 4744883 -80693597 - FLAM_A SINE Alu -2 131 1 366 246 45 128 chr17 4744883 4744970 -80693510 - MIR SINE MIR -146 116 47 1371 157 101 18 chr17 4745026 4745312 -80693168 + AluJo SINE Alu 1 310 -2 2047 112 0 16 chr17 4745823 4746128 -80692352 - AluSq SINE Alu -13 300 1 1697 178 3 13 chr17 4746134 4746437 -80692043 - AluJb SINE Alu 0 312 13 2114 92 0 7 chr17 4746450 4746770 -80691710 - AluSc SINE Alu 0 318 1 2184 82 23 7 chr17 4747343 4747649 -80690831 + AluSx SINE Alu 1 311 -1 1547 189 23 7 chr17 4747846 4748031 -80690449 - AluJo SINE Alu 0 312 119 189 0 0 0 chr17 4748031 4748052 -80690428 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1547 189 23 7 chr17 4748052 4748173 -80690307 - AluJo SINE Alu -193 119 1 472 233 178 25 chr17 4748267 4748430 -80690050 + MIR SINE MIR 31 218 -44 2064 90 0 10 chr17 4748531 4748810 -80689670 + AluSg SINE Alu 4 281 -29 201 74 0 0 chr17 4748810 4748837 -80689643 + (CAAG)n Simple_repeat Simple_repeat 1 27 0 274 213 52 29 chr17 4749034 4749170 -80689310 + (CGGGG)n Simple_repeat Simple_repeat 5 143 0 2120 57 4 18 chr17 4749530 4749809 -80688671 + AluSg SINE Alu 3 277 -33 1897 111 0 14 chr17 4752398 4752715 -80685765 + AluSx SINE Alu 1 313 0 1181 198 16 108 chr17 4753087 4753401 -80685079 - AluJb SINE Alu -16 286 2 1950 89 58 14 chr17 4753428 4753721 -80684759 - AluSq SINE Alu -7 306 1 2396 71 0 3 chr17 4753794 4754103 -80684377 - AluSx SINE Alu -4 308 1 257 264 0 0 chr17 4754155 4754208 -80684272 + MER58B DNA MER1_type 35 87 -254 831 199 55 0 chr17 4754209 4754390 -80684090 - AluJo SINE Alu -1 311 121 800 175 13 7 chr17 4754416 4754570 -80683910 + AluJb SINE Alu 158 312 0 1144 157 0 68 chr17 4754572 4754633 -80683847 + MER58B DNA MER1_type 115 179 -2241 2050 103 3 26 chr17 4754633 4754935 -80683545 + AluSx SINE Alu 1 295 -17 1144 157 0 68 chr17 4754935 4755109 -80683371 + MER58B DNA MER1_type 179 334 -7 330 301 89 8 chr17 4755112 4755235 -80683245 + L2 LINE L2 3180 3312 -1 2401 58 0 10 chr17 4755308 4755618 -80682862 - AluY SINE Alu -4 307 1 750 244 0 12 chr17 4755644 4755808 -80682672 + FRAM SINE Alu 1 162 -14 246 308 33 33 chr17 4755808 4755899 -80682581 - MIR SINE MIR -155 107 17 2028 92 4 0 chr17 4755969 4756241 -80682239 - AluSx SINE Alu -39 273 1 1796 171 0 3 chr17 4756639 4756937 -80681543 - AluJo SINE Alu -6 306 10 2410 57 0 3 chr17 4757274 4757570 -80680910 - AluY SINE Alu -16 295 1 1607 172 31 21 chr17 4757572 4757734 -80680746 - AluJo SINE Alu -9 293 134 1771 130 3 60 chr17 4757734 4757928 -80680552 - AluSx SINE Alu 0 312 108 248 71 48 0 chr17 4757928 4757970 -80680510 + T-rich Low_complexity Low_complexity 2 45 0 1989 92 0 21 chr17 4757970 4758252 -80680228 - AluSq SINE Alu -27 286 11 1771 130 3 60 chr17 4758252 4758397 -80680083 - AluSx SINE Alu -202 110 3 1607 172 31 21 chr17 4758397 4758524 -80679956 - AluJo SINE Alu -168 134 1 1762 95 57 44 chr17 4759032 4759328 -80679152 - AluSp SINE Alu -12 301 2 2263 102 0 3 chr17 4759664 4759968 -80678512 - AluSx SINE Alu -9 303 1 197 330 108 35 chr17 4760096 4760354 -80678126 + L2 LINE L2 2836 3112 -160 2283 93 3 3 chr17 4760361 4760674 -80677806 - AluSp SINE Alu 0 313 1 1628 171 10 33 chr17 4760677 4760976 -80677504 - AluJo SINE Alu -16 296 5 211 243 146 68 chr17 4761227 4761330 -80677150 - MIR SINE MIR -125 137 27 242 314 49 10 chr17 4761449 4761551 -80676929 + MIR3 SINE MIR 3 108 -100 2038 115 3 16 chr17 4761785 4762089 -80676391 + AluSx SINE Alu 5 304 -8 2092 94 3 19 chr17 4762271 4762580 -80675900 - AluSx SINE Alu -8 304 1 518 278 124 0 chr17 4762655 4762824 -80675656 + MIR SINE MIR 71 260 -2 2032 110 0 0 chr17 4762856 4763137 -80675343 + AluSg SINE Alu 11 291 -19 2170 64 0 7 chr17 4763342 4763623 -80674857 + AluY SINE Alu 1 279 -32 219 24 49 24 chr17 4763623 4763664 -80674816 + (TAAAA)n Simple_repeat Simple_repeat 1 42 0 1907 139 10 0 chr17 4763673 4763961 -80674519 - AluJo SINE Alu -21 291 1 288 0 0 0 chr17 4763987 4764019 -80674461 + (TG)n Simple_repeat Simple_repeat 2 33 0 2160 108 0 9 chr17 4764521 4764836 -80673644 - AluSq SINE Alu -1 312 1 2164 77 0 11 chr17 4764884 4765207 -80673273 - AluSq SINE Alu 0 320 1 1340 147 23 27 chr17 4765371 4765500 -80672980 + AluJb SINE Alu 3 131 -181 2162 104 0 3 chr17 4765500 4765799 -80672681 + AluSc SINE Alu 2 299 -10 1340 147 23 27 chr17 4765799 4765927 -80672553 + AluJb SINE Alu 131 259 -53 525 152 101 0 chr17 4765927 4766026 -80672454 + FRAM SINE Alu 67 175 -1 1866 98 47 20 chr17 4766586 4766882 -80671598 + AluSq SINE Alu 9 312 -1 320 260 0 40 chr17 4767145 4767245 -80671235 + L1MB5 LINE L1 5865 5960 -214 2136 120 3 3 chr17 4767325 4767634 -80670846 + AluSp SINE Alu 3 311 -2 354 229 8 29 chr17 4767688 4767832 -80670648 + L1MC/D LINE L1 5314 5455 -701 1761 173 7 0 chr17 4767853 4768148 -80670332 + AluJb SINE Alu 1 297 -15 285 354 18 6 chr17 4768304 4768468 -80670012 - L1ME LINE L1 -439 5682 5517 2301 93 0 0 chr17 4768508 4768819 -80669661 + AluSq SINE Alu 1 311 -2 1927 92 51 3 chr17 4768994 4769287 -80669193 - AluSq SINE Alu -6 307 1 1043 144 5 60 chr17 4769291 4769506 -80668974 - LTR62 LTR ERVK -516 203 1 2324 88 0 3 chr17 4769814 4770121 -80668359 + AluSx SINE Alu 1 306 -6 584 208 219 6 chr17 4770152 4770330 -80668150 - MLT1D LTR MaLR 0 505 290 787 274 89 38 chr17 4770598 4770967 -80667513 - MLT1H1 LTR MaLR 0 555 168 1511 84 5 0 chr17 4770970 4771173 -80667307 - AluSg1 SINE Alu -16 294 91 817 205 37 23 chr17 4771173 4771388 -80667092 - LTR7 LTR ERV1 0 450 233 715 86 0 0 chr17 4772423 4772516 -80665964 - AluSg1 SINE Alu -215 94 2 467 238 61 37 chr17 4772519 4772683 -80665797 - MLT1H1 LTR MaLR -413 177 10 1808 148 7 3 chr17 4772749 4773056 -80665424 + AluJo SINE Alu 1 308 0 1134 221 92 7 chr17 4773231 4773512 -80664968 - MLT1D LTR MaLR -160 345 41 1963 121 3 19 chr17 4773840 4774154 -80664326 + AluSp SINE Alu 2 310 -3 199 281 18 0 chr17 4774888 4774945 -80663535 + L2 LINE L2 2983 3040 -273 303 280 131 0 chr17 4775231 4775338 -80663142 - MIR3 SINE MIR -52 156 36 2142 98 0 10 chr17 4775556 4775861 -80662619 - AluSx SINE Alu -10 302 1 370 236 63 0 chr17 4776966 4777105 -80661375 + MIR SINE MIR 45 191 -70 2266 57 0 3 chr17 4777246 4777529 -80660951 - AluSq SINE Alu -7 306 25 2071 99 0 7 chr17 4777874 4778177 -80660303 + AluSc SINE Alu 1 301 0 1958 126 3 10 chr17 4778545 4778846 -80659634 + AluSx SINE Alu 6 304 -8 303 250 70 0 chr17 4779117 4779217 -80659263 + (CACTG)n Simple_repeat Simple_repeat 4 110 0 1990 212 42 67 chr17 4779453 4779501 -80658979 - LTR31 LTR ERV1 -17 602 554 2156 55 0 35 chr17 4779501 4779812 -80658668 - AluY SINE Alu -11 300 1 1990 212 42 67 chr17 4779812 4780203 -80658277 - LTR31 LTR ERV1 -65 554 155 2194 104 10 10 chr17 4780203 4780512 -80657968 - AluSq SINE Alu -4 309 1 1990 212 42 67 chr17 4780512 4780636 -80657844 - LTR31 LTR ERV1 -464 155 52 1607 164 38 11 chr17 4780636 4780797 -80657683 - AluJo SINE Alu -15 297 123 270 0 0 0 chr17 4780797 4780827 -80657653 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1607 164 38 11 chr17 4780827 4780952 -80657528 - AluJo SINE Alu -189 123 3 1990 212 42 67 chr17 4780952 4781003 -80657477 - LTR31 LTR ERV1 -567 52 1 627 163 10 0 chr17 4781472 4781570 -80656910 + AluJ/FLAM SINE Alu 2 100 -212 674 173 17 12 chr17 4781609 4781782 -80656698 + GA-rich Low_complexity Low_complexity 5 178 0 2188 113 0 6 chr17 4781904 4782215 -80656265 + AluSx SINE Alu 2 310 -2 396 295 18 9 chr17 4782764 4782876 -80655604 - L2 LINE L2 -42 3271 3159 1719 175 0 7 chr17 4782945 4783242 -80655238 - AluJo SINE Alu -13 299 5 1023 177 0 0 chr17 4783248 4783406 -80655074 - AluJb SINE Alu -15 297 140 2312 86 3 16 chr17 4783409 4783713 -80654767 - AluSg SINE Alu -6 304 5 736 123 9 0 chr17 4784098 4784204 -80654276 + AluSq/x SINE Alu 5 111 -201 885 176 66 44 chr17 4784223 4784285 -80654195 - AluJo SINE Alu -126 186 127 509 0 16 0 chr17 4784285 4784346 -80654134 + (TG)n Simple_repeat Simple_repeat 2 63 0 885 176 66 44 chr17 4784346 4784465 -80654015 - AluJo SINE Alu -185 127 1 756 161 0 0 chr17 4784465 4784583 -80653897 - AluSg/x SINE Alu -16 296 179 248 143 0 0 chr17 4784683 4784725 -80653755 + Alu SINE Alu 254 295 -4 1324 80 0 6 chr17 4784864 4785027 -80653453 - AluSp SINE Alu -151 162 1 264 30 0 0 chr17 4785095 4785128 -80653352 + (T)n Simple_repeat Simple_repeat 1 33 0 617 266 78 56 chr17 4785188 4785400 -80653080 + L2 LINE L2 2913 3138 -175 1942 138 51 0 chr17 4785400 4785696 -80652784 - AluSx SINE Alu -1 311 1 617 266 78 56 chr17 4785696 4785840 -80652640 + L2 LINE L2 3138 3277 -36 2130 113 19 13 chr17 4786002 4786311 -80652169 + AluSx SINE Alu 1 311 -1 2360 70 3 3 chr17 4786584 4786892 -80651588 + AluSp SINE Alu 2 309 0 324 295 11 0 chr17 4787175 4787270 -80651210 - MIR3 SINE MIR -2 206 111 1674 167 7 7 chr17 4787318 4787421 -80651059 + AluJb SINE Alu 31 133 -179 2351 105 0 0 chr17 4787421 4787715 -80650765 + AluSq SINE Alu 1 294 -19 1674 167 7 7 chr17 4787715 4787893 -80650587 + AluJb SINE Alu 132 312 0 2256 96 7 0 chr17 4788438 4788729 -80649751 + AluSc SINE Alu 5 297 -12 591 98 0 12 chr17 4788866 4788948 -80649532 - AluJb SINE Alu -148 164 84 1769 132 38 0 chr17 4788995 4789260 -80649220 + AluSx SINE Alu 18 292 -20 26 50 0 0 chr17 4789261 4789301 -80649179 + AT_rich Low_complexity Low_complexity 1 40 0 2253 96 20 0 chr17 4789354 4789646 -80648834 + AluSp SINE Alu 1 298 -15 2279 96 3 7 chr17 4789648 4789950 -80648530 + AluY SINE Alu 1 301 -10 303 275 101 36 chr17 4790055 4790193 -80648287 - L1MC/D LINE L1 -2183 5625 5479 2221 75 6 53 chr17 4790202 4790521 -80647959 + AluSg SINE Alu 2 305 -5 714 189 13 19 chr17 4790660 4790819 -80647661 - MLT1B LTR MaLR -41 349 192 218 171 0 0 chr17 4790870 4790905 -80647575 + GA-rich Low_complexity Low_complexity 1 35 0 427 215 16 0 chr17 4790920 4791041 -80647439 + CT-rich Low_complexity Low_complexity 1 123 0 582 180 0 27 chr17 4791041 4791152 -80647328 - AluJb SINE Alu -3 309 202 1447 177 0 4 chr17 4791154 4791386 -80647094 - AluJo SINE Alu -73 239 9 327 207 129 43 chr17 4791409 4791525 -80646955 - MLT1B LTR MaLR -263 127 2 1976 117 3 23 chr17 4791592 4791892 -80646588 - AluSg SINE Alu -15 295 2 991 117 0 0 chr17 4791983 4792111 -80646369 - AluJb SINE Alu -23 289 162 711 261 92 38 chr17 4792482 4792850 -80645630 - MLT1H1 LTR MaLR 0 555 168 1541 88 5 5 chr17 4792853 4793057 -80645423 - AluSg/x SINE Alu -16 296 93 698 209 32 41 chr17 4793057 4793277 -80645203 - LTR7 LTR ERV1 0 450 233 2302 109 3 0 chr17 4795466 4795777 -80642703 + AluSq SINE Alu 1 312 -1 378 0 0 0 chr17 4796277 4796319 -80642161 + (CA)n Simple_repeat Simple_repeat 2 43 0 1805 129 29 0 chr17 4796345 4796623 -80641857 + AluJo SINE Alu 1 286 -26 246 192 27 41 chr17 4796801 4796874 -80641606 + C-rich Low_complexity Low_complexity 1 72 0 28 0 0 0 chr17 4796968 4796996 -80641484 + GC_rich Low_complexity Low_complexity 1 28 0 5684 52 8 0 chr17 4797568 4798226 -80640254 + LTR5 LTR ERVK 1 663 -306 207 303 37 46 chr17 4798572 4798681 -80639799 - L2 LINE L2 -223 3049 2942 201 343 27 0 chr17 4798688 4798761 -80639719 + L2 LINE L2 2884 2958 -356 2390 81 3 3 chr17 4798779 4799087 -80639393 - AluSp SINE Alu -5 308 1 2210 82 13 16 chr17 4799093 4799396 -80639084 - AluSq SINE Alu -11 302 1 996 181 12 0 chr17 4800010 4800176 -80638304 + AluSg/x SINE Alu 138 305 -7 2029 121 3 36 chr17 4800329 4800662 -80637818 - AluSq SINE Alu 0 313 1 23 0 0 0 chr17 4800708 4800731 -80637749 + AT_rich Low_complexity Low_complexity 1 23 0 624 196 38 23 chr17 4800731 4800864 -80637616 - AluJb SINE Alu -176 136 2 907 126 0 0 chr17 4801335 4801454 -80637026 + AluSg/x SINE Alu 169 287 -23 2444 101 0 0 chr17 4801454 4801762 -80636718 + AluSx SINE Alu 1 308 -4 1901 116 0 56 chr17 4801951 4802235 -80636245 - AluSq SINE Alu -16 297 30 2087 127 20 0 chr17 4802371 4802663 -80635817 + AluSx SINE Alu 1 298 -14 2268 62 4 7 chr17 4802963 4803237 -80635243 + AluSp SINE Alu 32 304 -9 207 204 0 0 chr17 4803576 4803625 -80634855 + T-rich Low_complexity Low_complexity 3 51 0 4500 36 0 12 chr17 4803625 4804127 -80634353 - SVA Other Other 0 1386 891 2140 107 24 0 chr17 4804427 4804717 -80633763 - AluSx SINE Alu -15 297 1 303 252 47 65 chr17 4804843 4804950 -80633530 + L1MDa LINE L1 1984 2088 -4452 265 208 56 14 chr17 4805591 4805663 -80632817 - MIR SINE MIR -75 187 113 2334 79 0 0 chr17 4807257 4807537 -80630943 - AluSq SINE Alu -16 297 18 2396 83 0 13 chr17 4807708 4808022 -80630458 - AluSg SINE Alu 0 310 1 2640 67 0 0 chr17 4808027 4808339 -80630141 - AluSx SINE Alu 0 312 1 213 204 23 11 chr17 4808889 4808977 -80629503 + CT-rich Low_complexity Low_complexity 1 89 0 2308 107 3 3 chr17 4809296 4809605 -80628875 + AluSx SINE Alu 1 309 -3 426 282 141 33 chr17 4809634 4809847 -80628633 + MIR SINE MIR 21 256 -6 2139 105 3 3 chr17 4810013 4810308 -80628172 + AluSx SINE Alu 1 295 -17 2204 117 0 7 chr17 4810308 4810608 -80627872 + AluSg SINE Alu 1 298 -12 1406 150 0 0 chr17 4811381 4811588 -80626892 - AluSq SINE Alu -7 306 100 2247 81 0 7 chr17 4811590 4811875 -80626605 - AluY SINE Alu -28 283 1 2070 111 3 20 chr17 4812081 4812379 -80626101 - AluSx SINE Alu -19 293 1 253 314 49 10 chr17 4812610 4812712 -80625768 - MIR3 SINE MIR -100 108 3 231 182 158 87 chr17 4812831 4812934 -80625546 + MIR SINE MIR 27 138 -70 1747 166 10 30 chr17 4813181 4813483 -80624997 + AluJo SINE Alu 1 296 -16 2400 96 3 3 chr17 4813486 4813799 -80624681 + AluSp SINE Alu 1 313 0 202 313 113 45 chr17 4813806 4814071 -80624409 - L2 LINE L2 -160 3112 2830 2427 100 0 0 chr17 4814192 4814493 -80623987 + AluSx SINE Alu 1 301 -11 229 245 20 0 chr17 4814495 4814544 -80623936 + MIR3 SINE MIR 136 185 -23 1963 92 58 48 chr17 4814824 4815119 -80623361 + AluSp SINE Alu 2 299 -14 1337 114 11 0 chr17 4815221 4815396 -80623084 - AluSg SINE Alu -133 177 1 2084 122 30 7 chr17 4815459 4815754 -80622726 + AluSx SINE Alu 11 312 0 2183 105 7 13 chr17 4815756 4816061 -80622419 + AluSg SINE Alu 1 303 -7 277 330 0 0 chr17 4816068 4816159 -80622321 + L1ME LINE L1 5560 5650 -520 1849 173 77 0 chr17 4816165 4816478 -80622002 - MER1B DNA MER1_type 0 337 1 1703 168 10 20 chr17 4816544 4816847 -80621633 + AluJo SINE Alu 1 300 -12 1248 141 20 43 chr17 4816847 4817102 -80621378 - Charlie1b DNA MER1_type -216 307 59 321 300 36 18 chr17 4817219 4817329 -80621151 + L2 LINE L2 3152 3263 -9 2370 99 0 13 chr17 4817553 4817866 -80620614 + AluSp SINE Alu 1 309 -4 2175 124 0 0 chr17 4817938 4818236 -80620244 + AluSx SINE Alu 3 300 -12 2244 116 3 3 chr17 4818237 4818547 -80619933 + AluSp SINE Alu 1 310 -3 3140 179 92 28 chr17 4818553 4819234 -80619246 + MER21B LTR ERV1 94 818 -45 2321 86 0 0 chr17 4819255 4819565 -80618915 + AluSc SINE Alu 1 310 0 1492 193 4 22 chr17 4819572 4819847 -80618633 + AluJo SINE Alu 1 270 -42 252 0 0 0 chr17 4819866 4819894 -80618586 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 1304 161 81 22 chr17 4819923 4820196 -80618284 + AluJo SINE Alu 13 301 -11 27 49 0 0 chr17 4820267 4820308 -80618172 + AT_rich Low_complexity Low_complexity 1 41 0 300 246 158 35 chr17 4820516 4820630 -80617850 - L2 LINE L2 0 3313 3186 1193 148 6 0 chr17 4820719 4820895 -80617585 - AluSg/x SINE Alu -2 310 134 1932 129 3 45 chr17 4820895 4821205 -80617275 - AluSx SINE Alu -15 297 1 1825 73 0 0 chr17 4821241 4821475 -80617005 - L1PA6 LINE L1 -2 6152 5919 2131 109 3 10 chr17 4821594 4821897 -80616583 - AluSx SINE Alu -11 301 1 572 291 0 55 chr17 4822330 4822529 -80615951 - MIR SINE MIR -72 190 3 1790 88 0 0 chr17 4822647 4822874 -80615606 + AluSg/x SINE Alu 70 296 -14 2030 195 101 43 chr17 4823867 4824400 -80614080 - LTR6A LTR ERV1 0 564 1 2186 112 3 7 chr17 4824719 4825013 -80613467 - AluSx SINE Alu -19 293 1 1554 163 67 14 chr17 4825282 4825564 -80612916 + AluJo SINE Alu 1 297 -15 1759 164 44 0 chr17 4825564 4825856 -80612624 + AluJb SINE Alu 1 306 -6 757 161 0 0 chr17 4825858 4825970 -80612510 + FLAM_C SINE Alu 2 113 -30 24 0 0 0 chr17 4826021 4826045 -80612435 + AT_rich Low_complexity Low_complexity 1 24 0 2426 78 0 0 chr17 4826056 4826352 -80612128 + AluY SINE Alu 1 296 -15 845 138 23 0 chr17 4827088 4827218 -80611262 + FLAM_C SINE Alu 1 133 0 1157 242 11 23 chr17 4827294 4827558 -80610922 - MIR SINE MIR 0 262 2 2485 112 6 8 chr17 4827661 4828017 -80610463 + THE1A LTR MaLR 1 355 0 11729 91 10 8 chr17 4828017 4829594 -80608886 + THE1A-int LTR MaLR 1 1580 0 2272 127 17 17 chr17 4829594 4829949 -80608531 + THE1A LTR MaLR 1 355 0 1376 105 0 0 chr17 4830716 4830888 -80607592 + AluSq SINE Alu 1 172 -141 2159 105 18 0 chr17 4831258 4831544 -80606936 - AluSc SINE Alu -17 292 2 2070 126 7 3 chr17 4831834 4832128 -80606352 + AluSx SINE Alu 1 295 -17 7014 197 63 40 chr17 4832128 4832552 -80605928 + MLT1A1-int LTR MaLR 118 531 -1204 2207 126 3 0 chr17 4832552 4832861 -80605619 - AluSq SINE Alu -3 310 1 7014 197 63 40 chr17 4832861 4834018 -80604462 + MLT1A1-int LTR MaLR 531 1735 0 1825 167 39 28 chr17 4834018 4834170 -80604310 + MLT1A1 LTR MaLR 1 150 -215 1914 156 0 56 chr17 4834170 4834321 -80604159 + AluJo SINE Alu 1 126 -186 2382 96 0 10 chr17 4834321 4834624 -80603856 + AluY SINE Alu 1 300 -11 1914 156 0 56 chr17 4834624 4834793 -80603687 + AluJo SINE Alu 126 303 -9 1825 167 39 28 chr17 4834793 4835000 -80603480 + MLT1A1 LTR MaLR 150 364 -1 498 250 152 32 chr17 4835002 4835079 -80603401 + MLT1L LTR MaLR 201 267 -348 2242 92 46 0 chr17 4835079 4835363 -80603117 + AluSc SINE Alu 1 297 -12 498 250 152 32 chr17 4835363 4835628 -80602852 + MLT1L LTR MaLR 267 615 0 2186 119 14 0 chr17 4835767 4836061 -80602419 - AluSx SINE Alu -14 298 1 2263 102 13 3 chr17 4836197 4836500 -80601980 - AluSq SINE Alu -7 306 1 308 359 145 0 chr17 4836756 4836887 -80601593 - L2 LINE L2 -7 3265 3116 24 0 0 0 chr17 4836887 4836911 -80601569 + AT_rich Low_complexity Low_complexity 1 24 0 527 222 123 6 chr17 4836995 4837166 -80601314 - L2 LINE L2 -6 3307 3117 367 327 157 44 chr17 4837241 4837308 -80601172 - L2 LINE L2 -338 2976 2918 2316 107 3 3 chr17 4837308 4837617 -80600863 - AluSg SINE Alu -1 309 1 367 327 157 44 chr17 4837617 4838225 -80600255 - L2 LINE L2 -396 2918 2177 2252 98 0 30 chr17 4838225 4838530 -80599950 + AluSx SINE Alu 1 296 -16 367 327 157 44 chr17 4838530 4838725 -80599755 - L2 LINE L2 -1137 2177 2006 243 0 0 0 chr17 4838935 4838962 -80599518 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2046 74 4 0 chr17 4838964 4839207 -80599273 - AluSp SINE Alu -31 282 39 191 91 91 0 chr17 4840884 4840917 -80597563 - MIR SINE MIR -115 147 112 1941 163 0 7 chr17 4841051 4841352 -80597128 + AluJo SINE Alu 1 299 -13 2223 111 34 0 chr17 4841591 4841889 -80596591 + AluSx SINE Alu 5 312 0 750 261 33 58 chr17 4842030 4842164 -80596316 + MIR SINE MIR 28 155 -107 2548 73 0 0 chr17 4842164 4842467 -80596013 + AluY SINE Alu 1 303 -8 750 261 33 58 chr17 4842467 4842573 -80595907 + MIR SINE MIR 155 262 0 536 306 70 73 chr17 4842577 4842946 -80595534 - L2 LINE L2 0 3313 2946 1693 162 75 0 chr17 4843102 4843380 -80595100 - AluJb SINE Alu -13 299 1 2098 145 0 3 chr17 4843408 4843704 -80594776 + AluSx SINE Alu 1 295 -17 838 251 95 63 chr17 4843731 4844109 -80594371 + MLT1B LTR MaLR 1 390 0 2405 88 0 0 chr17 4844119 4844414 -80594066 + AluY SINE Alu 1 295 -16 2546 58 0 0 chr17 4844414 4844706 -80593774 + AluY SINE Alu 12 303 -8 1583 219 43 129 chr17 4845159 4845174 -80593306 + L1ME3A LINE L1 5564 5579 -591 2367 112 0 3 chr17 4845174 4845487 -80592993 + AluSx SINE Alu 1 312 0 1583 219 43 129 chr17 4845487 4845751 -80592729 + L1ME3A LINE L1 5579 5864 -306 1518 164 20 55 chr17 4845751 4846069 -80592411 + AluJo SINE Alu 1 308 0 1583 219 43 129 chr17 4846069 4846230 -80592250 + L1ME3A LINE L1 5864 5933 -237 2426 104 0 0 chr17 4846230 4846538 -80591942 + AluSg SINE Alu 2 309 -1 1583 219 43 129 chr17 4846538 4846753 -80591727 + L1ME3A LINE L1 5933 6165 -5 264 30 0 0 chr17 4847224 4847257 -80591223 + (TG)n Simple_repeat Simple_repeat 2 34 0 5067 31 0 0 chr17 4847257 4847873 -80590607 - L1PA4 LINE L1 -4 6151 5536 1942 160 0 0 chr17 4847873 4848167 -80590313 - AluJo SINE Alu -18 294 1 2361 105 7 0 chr17 4848175 4848481 -80589999 - AluSx SINE Alu -4 308 1 685 140 61 0 chr17 4848642 4848756 -80589724 - FLAM_C SINE Alu -17 126 6 2181 190 74 88 chr17 4848789 4848879 -80589601 + MER77 LTR ERV1 46 136 -469 2431 84 0 3 chr17 4848879 4849176 -80589304 + AluSg SINE Alu 1 296 -14 2110 137 0 3 chr17 4849186 4849486 -80588994 + AluSx SINE Alu 1 299 -13 2181 190 74 88 chr17 4849486 4849952 -80588528 + MER77 LTR ERV1 145 605 0 757 140 0 113 chr17 4850141 4850291 -80588189 + FLAM_A SINE Alu 1 133 0 2384 102 0 22 chr17 4850298 4850612 -80587868 + AluSg SINE Alu 1 307 -3 2391 92 0 0 chr17 4850620 4850913 -80587567 + AluSx SINE Alu 4 296 -16 298 264 0 0 chr17 4851277 4851349 -80587131 - MIR SINE MIR -176 86 15 236 152 22 0 chr17 4851389 4851435 -80587045 + L2 LINE L2 3224 3270 -2 2164 101 0 21 chr17 4851632 4851919 -80586561 - AluSq SINE Alu -31 282 2 2463 76 0 7 chr17 4851931 4852233 -80586247 - AluY SINE Alu -11 300 1 2404 99 0 0 chr17 4852505 4852807 -80585673 - AluSq SINE Alu -11 302 1 324 274 239 9 chr17 4852932 4853045 -80585435 - MIR3 SINE MIR -21 187 49 2267 110 0 23 chr17 4853383 4853692 -80584788 - AluSx SINE Alu -10 302 1 333 234 115 40 chr17 4853728 4853882 -80584598 + MIR SINE MIR 34 204 -58 2381 74 0 10 chr17 4853981 4854279 -80584201 - AluY SINE Alu -16 295 1 291 28 0 0 chr17 4854280 4854316 -80584164 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 2169 105 22 0 chr17 4854316 4854593 -80583887 - AluSg SINE Alu -27 283 1 2268 118 0 0 chr17 4855021 4855317 -80583163 + AluSx SINE Alu 1 296 -16 2222 120 0 3 chr17 4855317 4855616 -80582864 + AluSq SINE Alu 1 298 -15 1811 133 29 32 chr17 4855617 4855933 -80582547 + MER21A LTR ERV1 617 931 0 311 265 102 48 chr17 4855933 4856099 -80582381 + HAL1 LINE L1 2325 2499 -8 2263 113 3 3 chr17 4856820 4857121 -80581359 - AluSx SINE Alu -2 310 10 1019 144 4 105 chr17 4857191 4857420 -80581060 + L1 LINE L1 4827 5032 -1114 1028 113 0 0 chr17 4857420 4857562 -80580918 + AluSp/q SINE Alu 168 309 -4 363 236 28 69 chr17 4857724 4857868 -80580612 + MER117 DNA MER1_type 3 140 -57 484 181 0 0 chr17 4858338 4858421 -80580059 - Tigger5 DNA MER2_type 0 2323 2241 2173 115 26 0 chr17 4858421 4858725 -80579755 + AluSx SINE Alu 1 312 0 901 87 17 0 chr17 4858725 4858840 -80579640 - AluSq/x SINE Alu -195 117 1 1299 111 12 0 chr17 4858871 4859042 -80579438 + AluSg/x SINE Alu 138 310 -2 419 226 0 12 chr17 4859048 4859132 -80579348 - Tigger5 DNA MER2_type -2240 83 1 2131 123 0 3 chr17 4859542 4859864 -80578616 + AluSx SINE Alu 1 321 0 2395 99 0 3 chr17 4860267 4860581 -80577899 + AluSp SINE Alu 1 313 0 894 132 14 127 chr17 4860684 4860747 -80577733 - MER5A DNA MER1_type 0 189 121 2183 120 3 19 chr17 4860747 4861064 -80577416 + AluSx SINE Alu 1 312 0 894 132 14 127 chr17 4861064 4861213 -80577267 - MER5A DNA MER1_type -68 121 1 516 180 73 101 chr17 4861224 4861383 -80577097 + MER5B DNA MER1_type 4 159 -19 8201 64 2 3 chr17 4861383 4862353 -80576127 - LTR5 LTR ERVK 0 969 1 516 180 73 101 chr17 4862353 4862371 -80576109 + MER5B DNA MER1_type 159 176 -2 283 353 101 29 chr17 4862559 4862741 -80575739 - L2 LINE L2 -1968 1346 1132 2199 107 3 17 chr17 4862741 4862904 -80575576 - AluSg SINE Alu -16 294 135 2418 98 3 0 chr17 4862904 4863211 -80575269 - AluSg SINE Alu -2 308 1 2199 107 3 17 chr17 4863211 4863345 -80575135 - AluSg SINE Alu -175 135 1 283 353 101 29 chr17 4863345 4863468 -80575012 - L2 LINE L2 -2182 1132 1019 2325 78 3 19 chr17 4863827 4864134 -80574346 + AluSq SINE Alu 1 302 -11 2198 103 3 10 chr17 4864140 4864450 -80574030 + AluSp SINE Alu 1 308 -5 194 319 42 0 chr17 4864468 4864540 -80573940 - L2 LINE L2 -356 2958 2884 293 286 13 0 chr17 4865857 4865934 -80572546 - L2 LINE L2 -9 3263 3186 1652 127 91 36 chr17 4865962 4866237 -80572243 + AluJb SINE Alu 1 290 -22 2237 114 3 0 chr17 4866480 4866779 -80571701 + AluSx SINE Alu 1 300 -12 608 199 12 53 chr17 4867164 4867335 -80571145 - Charlie2 DNA MER1_type -7 2855 2692 1527 87 36 14 chr17 4867816 4868035 -80570445 - AluY SINE Alu -4 307 84 386 320 28 39 chr17 4868109 4868290 -80570190 + Charlie2 DNA MER1_type 1 179 -2603 1575 190 3 27 chr17 4868291 4868319 -80570161 - AluJb SINE Alu -2 310 283 264 30 0 0 chr17 4868319 4868352 -80570128 + (TTATA)n Simple_repeat Simple_repeat 4 36 0 1575 190 3 27 chr17 4868352 4868623 -80569857 - AluJb SINE Alu -29 283 18 260 252 110 47 chr17 4868631 4868758 -80569722 + Charlie2 DNA MER1_type 1931 2065 -797 2066 112 46 0 chr17 4869088 4869373 -80569107 + AluSp SINE Alu 1 298 -15 600 259 24 24 chr17 4869383 4869549 -80568931 - MER5A DNA MER1_type 0 189 24 2247 100 4 0 chr17 4869660 4869979 -80568501 - AluSx SINE Alu 0 320 1 2636 0 0 17 chr17 4870081 4870374 -80568106 - AluYa5 SINE Alu -6 305 18 1500 108 28 9 chr17 4870409 4870621 -80567859 + AluSg/x SINE Alu 92 307 -5 419 310 71 25 chr17 4870890 4871087 -80567393 - MIR SINE MIR 0 262 57 2193 108 3 7 chr17 4872191 4872498 -80565982 + AluSx SINE Alu 1 306 -6 751 174 122 31 chr17 4872498 4872694 -80565786 + MLT1A2 LTR MaLR 161 374 0 2149 101 3 0 chr17 4872916 4873202 -80565278 + AluSx SINE Alu 1 287 -25 189 0 0 0 chr17 4873202 4873223 -80565257 + (CA)n Simple_repeat Simple_repeat 2 22 0 200 259 25 0 chr17 4873908 4873989 -80564491 + (CCCCG)n Simple_repeat Simple_repeat 4 86 0 421 319 103 5 chr17 4874340 4874544 -80563936 + MIR SINE MIR 31 254 -8 233 265 128 26 chr17 4874530 4874647 -80563833 - L2 LINE L2 -301 3012 2884 * 293 304 25 44 chr17 4874762 4874889 -80563591 + L2 LINE L2 3159 3284 -29 2394 78 0 3 chr17 4874889 4875185 -80563295 + AluSg SINE Alu 3 297 -13 293 304 25 44 chr17 4875185 4875215 -80563265 + L2 LINE L2 3284 3313 0 456 273 106 30 chr17 4875237 4875435 -80563045 - L2 LINE L2 -515 2799 2587 1662 114 124 40 chr17 4875468 4875741 -80562739 + AluSg SINE Alu 1 296 -14 2187 222 61 48 chr17 4875853 4876555 -80561925 - LTR28 LTR ERV1 -2 1018 308 317 174 23 47 chr17 4876524 4876610 -80561870 - LTR1 LTR ERV1 -595 190 107 * 388 244 267 0 chr17 4876622 4876757 -80561723 - LTR28 LTR ERV1 -842 178 8 24 0 0 0 chr17 4877390 4877414 -80561066 + AT_rich Low_complexity Low_complexity 1 24 0 300 319 104 7 chr17 4877441 4877576 -80560904 - MIR SINE MIR -34 228 81 216 0 0 0 chr17 4878205 4878229 -80560251 + (TCTG)n Simple_repeat Simple_repeat 3 26 0 287 257 129 36 chr17 4878567 4878707 -80559773 - MIR3 SINE MIR -12 196 44 212 184 20 20 chr17 4880267 4880316 -80558164 + (CCCCAG)n Simple_repeat Simple_repeat 3 51 0 198 71 0 0 chr17 4881103 4881131 -80557349 + (GCGTG)n Simple_repeat Simple_repeat 4 31 0 279 133 0 0 chr17 4881615 4881660 -80556820 + (CA)n Simple_repeat Simple_repeat 1 45 0 249 117 30 0 chr17 4882244 4882293 -80556187 - MLT-int LTR MaLR -1159 212 140 729 183 17 46 chr17 4882330 4882505 -80555975 + MLT1C LTR MaLR 298 467 0 3082 133 4 12 chr17 4882703 4883190 -80555290 + MER1A DNA MER1_type 47 529 0 549 68 0 0 chr17 4883394 4883468 -80555012 + (CA)n Simple_repeat Simple_repeat 2 75 0 2390 94 3 7 chr17 4883514 4883821 -80554659 - AluSp SINE Alu -7 306 1 196 202 22 22 chr17 4884372 4884461 -80554019 + CT-rich Low_complexity Low_complexity 1 89 0 210 222 0 0 chr17 4884775 4884820 -80553660 + G-rich Low_complexity Low_complexity 4 48 0 183 80 0 0 chr17 4885304 4885329 -80553151 + (TGGA)n Simple_repeat Simple_repeat 4 28 0 1902 163 21 6 chr17 4885409 4885747 -80552733 + MER2 DNA MER2_type 2 344 0 233 175 18 53 chr17 4886764 4886821 -80551659 - SN5 Other centromeric -77 378 324 1069 295 42 31 chr17 4892159 4892831 -80545649 + L1MC3 LINE L1 5486 6164 -1621 502 248 39 107 chr17 4898007 4898147 -80540333 - L1MD3 LINE L1 0 7995 7886 1604 163 0 27 chr17 4898147 4898447 -80540033 + AluJo SINE Alu 1 292 -20 502 248 39 107 chr17 4898447 4898616 -80539864 - L1MD3 LINE L1 -109 7886 7707 372 173 0 40 chr17 4898820 4898895 -80539585 - AluJ/FRAM SINE Alu -11 291 220 * 1703 130 83 7 chr17 4898887 4899163 -80539317 + MER7A DNA MER2_type 48 342 -4 1692 137 16 46 chr17 4900784 4900918 -80537562 + AluSx SINE Alu 1 137 -175 6200 34 0 8 chr17 4900918 4901648 -80536832 + SVA Other Other 661 1384 -2 1692 137 16 46 chr17 4901648 4901819 -80536661 + AluSx SINE Alu 137 297 -15 239 222 30 30 chr17 4902093 4902235 -80536245 + (TTATA)n Simple_repeat Simple_repeat 1 142 0 229 365 117 7 chr17 4905198 4905335 -80533145 - MIR3 SINE MIR -15 193 42 678 200 113 16 chr17 4905640 4905771 -80532709 + MER3 DNA MER1_type 4 160 -49 1535 202 10 0 chr17 4905771 4906078 -80532402 - AluJb SINE Alu -2 310 1 678 200 113 16 chr17 4906078 4906131 -80532349 + MER3 DNA MER1_type 160 206 -3 31 44 0 0 chr17 4906775 4906820 -80531660 + AT_rich Low_complexity Low_complexity 1 45 0 2173 121 0 3 chr17 4907021 4907334 -80531146 + AluSx SINE Alu 1 312 0 577 197 8 38 chr17 4907360 4907492 -80530988 + FAM SINE Alu 1 45 -4 358 302 147 16 chr17 4907784 4907913 -80530567 + MIR3 SINE MIR 2 147 -61 1967 118 7 0 chr17 4907916 4908195 -80530285 + AluSq SINE Alu 1 281 -32 399 21 0 0 chr17 4908195 4908243 -80530237 + (TAAA)n Simple_repeat Simple_repeat 1 48 0 1268 204 92 79 chr17 4908332 4908405 -80530075 - MLT1C LTR MaLR 0 467 396 2111 91 7 10 chr17 4908405 4908701 -80529779 - AluSc SINE Alu -14 295 1 1268 204 92 79 chr17 4908701 4909083 -80529397 - MLT1C LTR MaLR -71 396 6 1564 217 141 40 chr17 4909130 4909344 -80529136 + L1ME3A LINE L1 4399 4590 -1556 347 0 23 0 chr17 4909344 4909387 -80529093 + (TG)n Simple_repeat Simple_repeat 1 44 0 1564 217 141 40 chr17 4909387 4909869 -80528611 + L1ME3A LINE L1 4590 5165 -981 2013 111 0 33 chr17 4909869 4910175 -80528305 + AluSg SINE Alu 1 296 -14 880 260 83 42 chr17 4910176 4910638 -80527842 + L1ME3A LINE L1 5392 5899 -271 1692 168 3 10 chr17 4910638 4910936 -80527544 + AluJb SINE Alu 6 301 -11 880 260 83 42 chr17 4910936 4910996 -80527484 + L1ME3A LINE L1 5899 5955 -215 317 297 34 47 chr17 4911063 4911211 -80527269 + L1ME3A LINE L1 5968 6113 -57 2158 94 3 7 chr17 4911211 4911509 -80526971 - AluSp SINE Alu -16 297 1 2111 119 0 3 chr17 4911576 4911878 -80526602 - AluSg SINE Alu -9 301 1 1531 181 13 10 chr17 4912663 4912961 -80525519 - AluJo SINE Alu -13 299 1 37 52 0 0 chr17 4913651 4913709 -80524771 + AT_rich Low_complexity Low_complexity 1 58 0 2173 106 6 3 chr17 4914230 4914542 -80523938 - AluSp SINE Alu 0 313 1 1849 153 7 3 chr17 4914673 4914968 -80523512 - AluSx SINE Alu -16 296 1 35 74 0 11 chr17 4914970 4915014 -80523466 + AT_rich Low_complexity Low_complexity 1 44 -50 2079 105 0 13 chr17 4915014 4915328 -80523152 - AluSx SINE Alu -2 310 1 35 74 0 11 chr17 4915328 4915378 -80523102 + AT_rich Low_complexity Low_complexity 44 94 0 799 236 112 117 chr17 4915512 4915597 -80522883 - L2 LINE L2 -799 2515 2431 2024 95 15 0 chr17 4915597 4915870 -80522610 - AluSc SINE Alu -32 277 1 799 236 112 117 chr17 4915870 4916229 -80522251 - L2 LINE L2 -883 2431 2073 1780 133 7 13 chr17 4916229 4916529 -80521951 + AluSx SINE Alu 1 298 -14 2579 13 10 7 chr17 4916996 4917300 -80521180 + AluYa5 SINE Alu 1 305 -6 2083 103 4 0 chr17 4917402 4917726 -80520754 + AluSx SINE Alu 1 325 0 646 259 24 24 chr17 4917836 4918002 -80520478 + MER5A DNA MER1_type 24 189 0 1920 112 46 0 chr17 4918012 4918297 -80520183 - AluSp SINE Alu -15 298 1 278 254 111 40 chr17 4918626 4918752 -80519728 - Charlie2 DNA MER1_type -797 2065 1931 1269 191 8 12 chr17 4918760 4919017 -80519463 + AluJb SINE Alu 18 273 -39 31 44 0 0 chr17 4919643 4919688 -80518792 + AT_rich Low_complexity Low_complexity 1 45 0 2179 125 0 0 chr17 4919889 4920201 -80518279 + AluSx SINE Alu 1 312 0 556 199 8 38 chr17 4920227 4920358 -80518122 + FAM SINE Alu 1 44 -5 358 302 147 16 chr17 4920647 4920776 -80517704 + MIR3 SINE MIR 2 147 -61 1899 120 18 0 chr17 4920779 4921063 -80517417 + AluSq SINE Alu 1 289 -24 288 0 0 0 chr17 4921071 4921103 -80517377 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 378 171 0 14 chr17 4921192 4921262 -80517218 - MLT1C LTR MaLR 0 467 399 2227 72 10 3 chr17 4921263 4921556 -80516924 - AluSc SINE Alu -14 295 1 1860 133 0 17 chr17 4921556 4921849 -80516631 - AluJb SINE Alu -14 298 11 643 280 63 19 chr17 4921849 4922161 -80516319 - L1ME LINE L1 -360 5806 5479 1955 93 6 42 chr17 4922170 4922481 -80515999 + AluSg SINE Alu 2 301 -9 247 162 0 0 chr17 4922540 4922577 -80515903 - MLT1B LTR MaLR 0 390 354 817 192 13 0 chr17 4922620 4922776 -80515704 - MLT1B LTR MaLR -41 349 192 218 171 0 0 chr17 4922827 4922862 -80515618 + GA-rich Low_complexity Low_complexity 1 35 0 427 215 16 0 chr17 4922877 4922998 -80515482 + CT-rich Low_complexity Low_complexity 1 123 0 556 189 0 27 chr17 4922998 4923109 -80515371 - AluJb SINE Alu -3 309 202 1356 181 4 0 chr17 4923111 4923349 -80515131 - AluJo SINE Alu -73 239 1 328 203 125 55 chr17 4923349 4923477 -80515003 - MLT1B LTR MaLR -252 138 2 2077 116 3 0 chr17 4923543 4923835 -80514645 - AluSg SINE Alu -16 294 2 1875 145 0 0 chr17 4923929 4924218 -80514262 - AluJb SINE Alu -23 289 1 1970 83 3 95 chr17 4924387 4924524 -80513956 + AluSq SINE Alu 1 149 -164 2033 78 50 0 chr17 4924524 4924807 -80513673 + AluY SINE Alu 1 297 -14 1970 83 3 95 chr17 4924807 4925006 -80513474 + AluSq SINE Alu 149 306 -7 2101 117 0 3 chr17 4925786 4926085 -80512395 - AluSg SINE Alu -12 298 1 1960 107 0 13 chr17 4926085 4926384 -80512096 - AluSx SINE Alu -17 295 1 413 271 145 42 chr17 4926551 4926765 -80511715 - MIR SINE MIR -6 256 21 1067 153 22 9 chr17 4926794 4927016 -80511464 - AluSq SINE Alu -4 309 85 262 239 31 25 chr17 4927150 4927309 -80511171 + (CGCGG)n Simple_repeat Simple_repeat 1 160 0 26 50 0 0 chr17 4927448 4927488 -80510992 + GC_rich Low_complexity Low_complexity 1 40 0 405 0 0 0 chr17 4927500 4927545 -80510935 + (GA)n Simple_repeat Simple_repeat 2 46 0 599 228 233 5 chr17 4927546 4927752 -80510728 - L2 LINE L2 -1239 2075 1823 1368 270 156 38 chr17 4927965 4928557 -80509923 - L2 LINE L2 -2241 1073 390 1876 157 0 7 chr17 4928557 4928863 -80509617 + AluJb SINE Alu 5 308 -4 1368 270 156 38 chr17 4928863 4928948 -80509532 - L2 LINE L2 -2924 390 316 366 171 11 34 chr17 4929269 4929357 -80509123 - L1MA9 LINE L1 -5 6307 6222 3074 31 3 0 chr17 4929455 4929811 -80508669 - L1P2 LINE L1 -354 5801 5445 757 71 0 0 chr17 4929811 4929905 -80508575 + L1PA4 LINE L1 6055 6152 -3 2016 115 14 0 chr17 4930606 4930892 -80507588 + AluSq SINE Alu 1 290 -23 1382 180 11 18 chr17 4931023 4931326 -80507154 - AluSx SINE Alu 0 301 1 21 36 0 0 chr17 4931688 4931716 -80506764 + AT_rich Low_complexity Low_complexity 1 28 0 2131 156 99 17 chr17 4932083 4932505 -80505975 - MSTB2 LTR MaLR 0 457 1 683 281 92 39 chr17 4933694 4934181 -80504299 + L1ME4a LINE L1 5608 6120 -1 1287 152 0 0 chr17 4934261 4934458 -80504022 + AluJb SINE Alu 85 322 0 234 73 0 24 chr17 4934458 4934499 -80503981 + (CAAAA)n Simple_repeat Simple_repeat 1 175 0 183 244 89 67 chr17 4935627 4935717 -80502763 + L2 LINE L2 436 527 -2787 1641 154 44 17 chr17 4936389 4936682 -80501798 - AluJb SINE Alu -11 301 1 411 306 148 27 chr17 4938030 4938213 -80500267 + MIR SINE MIR 34 238 -24 542 205 74 95 chr17 4938254 4938305 -80500175 + Charlie1 DNA MER1_type 32 83 -2678 1994 130 0 19 chr17 4938305 4938620 -80499860 - AluJb SINE Alu -3 309 1 542 205 74 95 chr17 4938620 4938758 -80499722 + Charlie1 DNA MER1_type 83 217 -2544 486 165 52 0 chr17 4938768 4938865 -80499615 + Charlie1 DNA MER1_type 2630 2731 -30 205 276 51 71 chr17 4938901 4938999 -80499481 + MIR SINE MIR 162 257 -5 1433 170 48 15 chr17 4939950 4940255 -80498225 + AluJo SINE Alu 6 319 0 2184 94 0 29 chr17 4940762 4941070 -80497410 + AluSx SINE Alu 1 299 -13 1995 104 7 3 chr17 4941130 4941417 -80497063 + AluSc SINE Alu 3 290 -19 2097 119 6 72 chr17 4944020 4944381 -80494099 + MER1B DNA MER1_type 1 337 0 2335 93 3 0 chr17 4944989 4945300 -80493180 + AluSp SINE Alu 1 312 -1 438 263 97 41 chr17 4945566 4945789 -80492691 + L1MC/D LINE L1 2963 3211 -2935 2028 97 7 3 chr17 4945789 4946087 -80492393 + AluY SINE Alu 1 299 -12 438 263 97 41 chr17 4946087 4946182 -80492298 + L1MC/D LINE L1 3211 3299 -2847 946 88 0 0 chr17 4946300 4946425 -80492055 + AluSq/x SINE Alu 1 125 -187 2121 109 3 0 chr17 4946429 4946732 -80491748 + AluSg SINE Alu 1 304 -6 787 278 55 44 chr17 4946734 4947299 -80491181 + L1MC/D LINE L1 3422 3992 -2154 254 247 21 10 chr17 4947605 4947702 -80490778 + L1MC/D LINE L1 4272 4369 -1777 1779 121 10 39 chr17 4948934 4949240 -80489240 - AluSq SINE Alu -16 297 1 761 143 0 0 chr17 4949426 4949538 -80488942 + FLAM_C SINE Alu 6 117 -26 26 0 0 0 chr17 4949545 4949571 -80488909 + AT_rich Low_complexity Low_complexity 1 26 0 29 0 0 0 chr17 4953570 4953599 -80484881 + AT_rich Low_complexity Low_complexity 1 29 0 681 246 15 41 chr17 4953600 4953795 -80484685 - LTR41 LTR ERVL -583 190 1 2442 107 8 8 chr17 4954039 4954394 -80484086 - THE1A LTR MaLR 0 355 1 11942 84 11 5 chr17 4954394 4955964 -80482516 - THE1A-int LTR MaLR 0 1580 1 2444 102 11 8 chr17 4955964 4956318 -80482162 - THE1A LTR MaLR 0 355 1 1170 239 15 23 chr17 4956421 4956684 -80481796 + MIR SINE MIR 2 262 0 831 138 23 0 chr17 4956759 4956889 -80481591 - FLAM_C SINE Alu 0 133 1 2386 61 0 3 chr17 4957620 4957917 -80480563 - AluY SINE Alu -15 296 1 2062 120 13 0 chr17 4958074 4958382 -80480098 + AluSx SINE Alu 1 312 0 1503 194 39 8 chr17 4958384 4958744 -80479736 + L1MC/D LINE L1 4480 4850 -1296 2182 101 0 0 chr17 4958749 4959045 -80479435 - AluY SINE Alu -15 296 1 253 180 0 0 chr17 4959049 4959099 -80479381 + L1MA10 LINE L1 6285 6334 0 1648 88 0 0 chr17 4960416 4960633 -80477847 + AluSg/x SINE Alu 83 299 -11 184 313 127 45 chr17 4960754 4960888 -80477592 - L2 LINE L2 -218 3054 2910 360 270 36 0 chr17 4962185 4962296 -80476184 + L1MC/D LINE L1 5486 5600 -744 2209 113 0 0 chr17 4962422 4962731 -80475749 + AluSq SINE Alu 1 309 -4 303 124 101 34 chr17 4962731 4962787 -80475693 - LTR37A LTR ERV1 -8 418 352 1499 116 0 0 chr17 4962787 4962994 -80475486 + AluSg/x SINE Alu 85 291 -21 303 124 101 34 chr17 4962994 4963026 -80475454 - LTR37A LTR ERV1 -74 352 324 347 107 0 0 chr17 4963032 4963088 -80475392 + Alu SINE Alu 247 302 0 686 193 33 82 chr17 4963094 4963165 -80475315 - LTR37A LTR ERV1 -111 315 242 4423 131 68 30 chr17 4963165 4963334 -80475146 + LTR39 LTR ERV1 1 162 -621 1998 111 0 20 chr17 4963334 4963665 -80474815 + AluSx SINE Alu 1 312 0 4423 131 68 30 chr17 4963665 4964080 -80474400 + LTR39 LTR ERV1 162 622 -161 2398 81 0 0 chr17 4964080 4964388 -80474092 + AluSx SINE Alu 1 308 -4 4423 131 68 30 chr17 4964388 4964557 -80473923 + LTR39 LTR ERV1 622 783 0 686 193 33 82 chr17 4964557 4964728 -80473752 - LTR37A LTR ERV1 -184 242 85 3184 123 35 0 chr17 4964744 4965206 -80473274 + MER1A DNA MER1_type 37 514 -15 1969 87 21 24 chr17 4965329 4965617 -80472863 - AluSc SINE Alu -14 295 9 897 169 38 0 chr17 4965641 4965801 -80472679 - FRAM SINE Alu 0 166 1 2368 57 0 10 chr17 4966330 4966629 -80471851 + AluSg SINE Alu 4 299 -11 2580 162 19 71 chr17 4966853 4966882 -80471598 + L1MB2 LINE L1 5446 5475 -696 222 37 0 0 chr17 4966882 4966909 -80471571 + (CA)n Simple_repeat Simple_repeat 2 28 0 2580 162 19 71 chr17 4966909 4967245 -80471235 + L1MB2 LINE L1 5475 5827 -344 2222 91 0 0 chr17 4967245 4967541 -80470939 + AluSx SINE Alu 1 296 -16 2580 162 19 71 chr17 4967541 4967664 -80470816 + L1MB2 LINE L1 5827 5901 -270 2272 96 0 0 chr17 4967664 4967957 -80470523 + AluSx SINE Alu 3 295 -17 2580 162 19 71 chr17 4967957 4968054 -80470426 + L1MB2 LINE L1 5901 6002 -169 22 70 0 0 chr17 4968113 4968156 -80470324 + AT_rich Low_complexity Low_complexity 1 43 0 1452 139 7 85 chr17 4968156 4968206 -80470274 + Tigger2 DNA MER2_type 2446 2498 -220 2107 88 12 34 chr17 4968206 4968526 -80469954 - AluSp SINE Alu 0 313 1 2029 133 3 0 chr17 4968526 4968827 -80469653 - AluSx SINE Alu -10 302 1 1452 139 7 85 chr17 4968827 4969070 -80469410 + Tigger2 DNA MER2_type 2496 2717 -1 194 200 160 20 chr17 4969088 4969138 -80469342 + L2 LINE L2 3024 3080 -233 697 239 133 70 chr17 4969138 4969428 -80469052 + L1MEc LINE L1 805 1140 -5256 2263 91 7 0 chr17 4969428 4969737 -80468743 + AluSp SINE Alu 1 311 -2 697 239 133 70 chr17 4969737 4969944 -80468536 + L1MEc LINE L1 1140 1333 -5063 721 170 7 21 chr17 4970205 4970346 -80468134 - AluY SINE Alu -22 289 151 278 150 0 0 chr17 4970346 4970386 -80468094 - Alu SINE Alu -259 40 1 266 188 12 47 chr17 4970388 4970473 -80468007 + L1MC4a LINE L1 5858 5939 -1869 2148 112 0 0 chr17 4970473 4970777 -80467703 + AluSq SINE Alu 1 304 -9 4215 185 43 21 chr17 4970833 4971502 -80466978 - L1MB7 LINE L1 0 6184 5531 2039 112 7 7 chr17 4971502 4971798 -80466682 - AluSq SINE Alu -17 296 1 4215 185 43 21 chr17 4971798 4972125 -80466355 - L1MB7 LINE L1 -653 5531 5212 2136 113 6 0 chr17 4972125 4972436 -80466044 - AluSp SINE Alu 0 313 1 4215 185 43 21 chr17 4972436 4972905 -80465575 - L1MB7 LINE L1 -972 5212 4683 351 125 0 0 chr17 4972911 4972959 -80465521 + Alu SINE Alu 1 48 -253 1267 281 93 21 chr17 4973092 4973662 -80464818 - HsTC2a DNA Tc2 0 744 134 204 40 0 0 chr17 4973878 4973903 -80464577 + (TTCA)n Simple_repeat Simple_repeat 4 28 0 817 192 13 0 chr17 4974396 4974552 -80463928 + MLT1B LTR MaLR 192 349 -41 247 162 0 0 chr17 4974595 4974632 -80463848 + MLT1B LTR MaLR 354 390 0 2063 77 6 45 chr17 4974691 4975003 -80463477 - AluSg SINE Alu -9 301 2 629 283 80 23 chr17 4975012 4975312 -80463168 + L1MC/D LINE L1 5479 5795 -2013 1898 129 0 17 chr17 4975324 4975619 -80462861 + AluJb SINE Alu 11 300 -12 2707 6 0 22 chr17 4975619 4975936 -80462544 + AluY SINE Alu 1 310 -1 2204 105 0 0 chr17 4975936 4976230 -80462250 + AluSp SINE Alu 1 294 -19 1177 135 0 0 chr17 4976230 4976408 -80462072 + AluSc SINE Alu 132 309 0 1136 142 0 0 chr17 4976911 4977080 -80461400 - AluJb SINE Alu -143 169 1 2200 73 7 17 chr17 4977712 4978012 -80460468 - AluY SINE Alu -14 297 1 413 115 16 0 chr17 4978285 4978346 -80460134 - AluS SINE Alu -255 63 2 2299 80 0 0 chr17 4978431 4978730 -80459750 + AluSg SINE Alu 1 299 -11 333 280 131 0 chr17 4978947 4979054 -80459426 + MIR3 SINE MIR 36 156 -52 224 283 17 0 chr17 4979336 4979396 -80459084 - L2 LINE L2 -273 3040 2980 2061 121 3 10 chr17 4980119 4980433 -80458047 - AluSp SINE Alu 0 313 2 1123 224 92 7 chr17 4980758 4981039 -80457441 + MLT1D LTR MaLR 41 345 -160 1778 148 7 3 chr17 4981214 4981521 -80456959 - AluJo SINE Alu 0 308 1 494 238 61 37 chr17 4981587 4981751 -80456729 + MLT1H1 LTR MaLR 10 177 -413 710 96 0 0 chr17 4981754 4981848 -80456632 + AluSg1 SINE Alu 2 95 -214 830 215 37 19 chr17 4983046 4983260 -80455220 + LTR7 LTR ERV1 233 450 0 1455 94 5 0 chr17 4983260 4983463 -80455017 + AluSg1 SINE Alu 93 296 -16 798 261 92 38 chr17 4983466 4983834 -80454646 + MLT1H1 LTR MaLR 168 555 0 599 208 219 6 chr17 4984102 4984280 -80454200 + MLT1D LTR MaLR 290 505 0 2319 88 0 3 chr17 4984311 4984619 -80453861 - AluSx SINE Alu -5 307 1 856 169 5 77 chr17 4984928 4985123 -80453357 + LTR62 LTR ERVK 1 181 -538 1214 206 0 23 chr17 4985148 4985449 -80453031 + AluSg SINE Alu 1 294 -16 2278 66 3 10 chr17 4985532 4985835 -80452645 + AluSp SINE Alu 1 301 -12 2205 113 0 3 chr17 4985844 4986155 -80452325 + AluSq SINE Alu 1 310 -3 1507 123 0 25 chr17 4986211 4986446 -80452034 + AluSq SINE Alu 85 313 0 5013 78 39 58 chr17 4986450 4987306 -80451174 + SVA Other Other 29 867 -519 244 323 10 10 chr17 4987437 4987536 -80450944 + L1MC4a LINE L1 5755 5853 -1955 802 134 0 0 chr17 4987551 4987670 -80450810 - AluSp/q SINE Alu -19 294 176 947 138 0 7 chr17 4987670 4987822 -80450658 - AluSg/x SINE Alu -8 302 152 293 143 0 0 chr17 4987822 4987864 -80450616 - Alu SINE Alu -259 42 1 289 191 12 36 chr17 4987866 4987950 -80450530 + L1MC4a LINE L1 5858 5939 -1869 1631 113 0 0 chr17 4987950 4988181 -80450299 + AluSx SINE Alu 1 231 -81 1387 141 0 0 chr17 4988282 4988495 -80449985 + AluSg/x SINE Alu 98 310 0 337 257 37 37 chr17 4988540 4988649 -80449831 + MIR SINE MIR 154 262 0 1719 148 16 29 chr17 4988770 4989080 -80449400 + AluSx SINE Alu 1 306 -6 1994 104 0 11 chr17 4989140 4989451 -80449029 + AluSx SINE Alu 1 308 0 863 91 0 0 chr17 4989474 4989584 -80448896 + AluSq/x SINE Alu 1 110 -203 225 94 0 0 chr17 4990027 4990059 -80448421 + (T)n Simple_repeat Simple_repeat 1 32 0 761 147 0 0 chr17 4990060 4990176 -80448304 - AluSc SINE Alu -62 247 132 1969 122 3 7 chr17 4990176 4990470 -80448010 - AluSx SINE Alu -19 293 1 697 203 8 8 chr17 4991283 4991416 -80447064 + FLAM_A SINE Alu 1 133 0 2048 95 10 23 chr17 4991854 4992159 -80446321 - AluSp SINE Alu -12 301 1 257 283 33 0 chr17 4992196 4992256 -80446224 - L2 LINE L2 -54 3218 3157 713 204 119 6 chr17 4992288 4992464 -80446016 - MIR SINE MIR -48 214 19 606 160 40 8 chr17 4992464 4992589 -80445891 - L1MB8 LINE L1 -1 6177 6049 1104 179 0 0 chr17 4992589 4992785 -80445695 - AluJb SINE Alu -6 306 111 180 0 0 0 chr17 4992785 4992805 -80445675 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 1841 115 25 4 chr17 4992805 4993083 -80445397 - AluSx SINE Alu -27 285 2 3227 219 104 66 chr17 4993086 4993600 -80444880 - L1M4 LINE L1 -863 5283 4790 2093 123 0 22 chr17 4993600 4993918 -80444562 - AluSx SINE Alu -1 311 1 3227 219 104 66 chr17 4993918 4994147 -80444333 - L1M4 LINE L1 -1356 4790 4571 261 108 0 0 chr17 4994147 4994184 -80444296 + THE1B LTR MaLR 328 364 0 3227 219 104 66 chr17 4994184 4994309 -80444171 - L1M4 LINE L1 -1575 4571 4452 1719 168 0 7 chr17 4994309 4994606 -80443874 + AluJb SINE Alu 1 295 -17 3227 219 104 66 chr17 4994606 4995176 -80443304 - L1M4 LINE L1 -1694 4452 3750 808 171 0 49 chr17 4995180 4995192 -80443288 - AluSg/x SINE Alu -23 289 278 1765 156 0 10 chr17 4995192 4995493 -80442987 - AluJb SINE Alu -13 299 2 243 0 0 0 chr17 4995493 4995520 -80442960 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 808 171 0 49 chr17 4995520 4995670 -80442810 - AluSg/x SINE Alu -32 280 134 1860 142 10 3 chr17 4995670 4995973 -80442507 - AluSx SINE Alu -7 305 1 701 243 177 54 chr17 4996599 4996751 -80441729 - MLT1D LTR MaLR 0 390 258 2258 92 3 3 chr17 4996751 4997056 -80441424 - AluSx SINE Alu -7 305 1 701 243 177 54 chr17 4997056 4997294 -80441186 - MLT1D LTR MaLR -132 258 1 1079 172 35 25 chr17 4998146 4998349 -80440131 + AluJo SINE Alu 86 290 -22 304 292 211 44 chr17 4999657 5000017 -80438463 + L2 LINE L2 664 1083 -2231 1008 266 51 43 chr17 5000043 5000393 -80438087 + MER67C LTR ERV1 157 509 -201 2044 132 3 0 chr17 5000393 5000696 -80437784 + AluSx SINE Alu 1 304 -8 1177 168 0 26 chr17 5000760 5000992 -80437488 - AluJb SINE Alu -2 310 85 687 181 0 0 chr17 5000992 5001097 -80437383 - AluSg/x SINE Alu -62 250 146 23 0 0 0 chr17 5001982 5002005 -80436475 + GC_rich Low_complexity Low_complexity 1 23 0 390 313 50 56 chr17 5003214 5003393 -80435087 + MER5B DNA MER1_type 1 178 0 2169 96 0 3 chr17 5003676 5003969 -80434511 + AluSq SINE Alu 1 292 -21 230 317 39 29 chr17 5004049 5004153 -80434327 + L2 LINE L2 2928 3032 -240 719 140 18 0 chr17 5004746 5004860 -80433620 + FLAM_C SINE Alu 2 117 -26 21 57 0 0 chr17 5004860 5004895 -80433585 + AT_rich Low_complexity Low_complexity 1 35 0 2053 117 3 0 chr17 5006277 5006576 -80431904 + AluSg SINE Alu 1 300 -10 209 301 243 10 chr17 5008567 5008670 -80429810 + MIR3 SINE MIR 4 130 -78 407 113 0 0 chr17 5008697 5008768 -80429712 - Alu SINE Alu -1 310 240 297 145 84 72 chr17 5009009 5009092 -80429388 + FAM SINE Alu 61 144 -31 251 143 0 24 chr17 5009078 5009120 -80429360 + FAM SINE Alu 104 144 -35 * 1596 181 0 0 chr17 5009125 5009395 -80429085 + AluJb SINE Alu 22 291 -21 581 286 160 6 chr17 5009468 5009793 -80428687 - L1ME LINE L1 -317 5804 5430 1459 166 0 46 chr17 5009856 5010140 -80428340 - AluJo SINE Alu -37 275 5 21 0 0 0 chr17 5010143 5010164 -80428316 + AT_rich Low_complexity Low_complexity 1 21 0 1506 197 106 6 chr17 5010168 5010498 -80427982 - L1MC4 LINE L1 -1139 6903 6541 1395 203 52 41 chr17 5010729 5011118 -80427362 - L1ME2 LINE L1 -20 6144 5755 2108 114 3 0 chr17 5011414 5011721 -80426759 - AluSx SINE Alu -1 311 4 315 275 75 6 chr17 5011722 5011882 -80426598 - L1ME LINE L1 -677 5444 5274 1612 100 118 42 chr17 5012130 5012460 -80426020 - L1MB3 LINE L1 -1 6182 5828 1352 124 9 14 chr17 5012460 5012670 -80425810 - AluSg/x SINE Alu -13 297 89 2246 75 3 3 chr17 5012670 5012965 -80425515 + AluSx SINE Alu 6 300 -12 283 168 158 42 chr17 5012965 5013060 -80425420 - L1MB3 LINE L1 -372 5799 5694 26 50 0 0 chr17 5014384 5014424 -80424056 + AT_rich Low_complexity Low_complexity 1 40 0 872 115 0 23 chr17 5014424 5014554 -80423926 - FLAM_C SINE Alu -16 127 1 225 146 0 0 chr17 5014555 5014603 -80423877 + (T)n Simple_repeat Simple_repeat 1 48 0 234 209 0 0 chr17 5016539 5016582 -80421898 + L2 LINE L2 2715 2757 -557 260 246 146 27 chr17 5016835 5016945 -80421535 - LTR11 LTR ERV -217 467 345 388 246 153 16 chr17 5017478 5017661 -80420819 + Charlie8 DNA MER1_type 35 242 -2175 213 193 0 136 chr17 5018516 5018604 -80419876 + MIR SINE MIR 116 191 -71 2355 60 3 10 chr17 5018733 5019047 -80419433 + AluSp SINE Alu 1 312 -1 2312 142 28 73 chr17 5020296 5020805 -80417675 - LTR19A LTR ERV1 0 486 1 3068 63 8 0 chr17 5020805 5021184 -80417296 - LTR19A-int LTR ERV1 0 5586 5205 3106 124 0 0 chr17 5021211 5021662 -80416818 - PABL_A-int LTR ERV1 -2039 2976 2526 1424 182 113 31 chr17 5021809 5022128 -80416352 - MER47A DNA MER2_type -2 364 20 881 195 32 45 chr17 5022556 5022777 -80415703 + MER46A DNA MER2_type 2 219 -17 198 328 166 20 chr17 5022777 5023030 -80415450 - L2 LINE L2 -2127 1187 898 207 323 168 19 chr17 5023106 5023267 -80415213 - L2 LINE L2 -16 3297 3113 636 269 29 43 chr17 5023546 5023825 -80414655 - L1ME LINE L1 -369 5752 5478 1689 171 20 0 chr17 5023872 5024170 -80414310 - AluJb SINE Alu -8 304 1 1715 150 17 3 chr17 5024178 5024472 -80414008 - AluJo SINE Alu -1 311 14 2018 96 17 14 chr17 5025134 5025426 -80413054 - AluSg SINE Alu -17 293 1 441 261 14 70 chr17 5025520 5025662 -80412818 + L2 LINE L2 3139 3272 0 2409 76 0 0 chr17 5025984 5026287 -80412193 + AluSx SINE Alu 1 303 -9 1469 92 0 5 chr17 5026375 5026581 -80411899 + AluSx SINE Alu 1 205 -107 2029 76 42 21 chr17 5026602 5026890 -80411590 - AluY SINE Alu -15 296 3 2277 95 0 0 chr17 5027417 5027723 -80410757 + AluSx SINE Alu 1 306 -6 254 219 67 92 chr17 5027859 5027910 -80410570 + MER112 DNA MER1_type 1 52 -208 2313 81 0 0 chr17 5027910 5028208 -80410272 + AluY SINE Alu 1 298 -13 254 219 67 92 chr17 5028208 5028275 -80410205 + MER112 DNA MER1_type 52 116 -144 872 138 7 22 chr17 5028277 5028415 -80410065 + AluJo SINE Alu 1 136 -176 1716 152 24 7 chr17 5028494 5028784 -80409696 + AluJo SINE Alu 1 295 -17 24 32 0 0 chr17 5028986 5029017 -80409463 + AT_rich Low_complexity Low_complexity 1 31 0 1646 174 3 7 chr17 5029021 5029308 -80409172 - AluJo SINE Alu -26 286 1 249 285 78 66 chr17 5029311 5029553 -80408927 - HAL1 LINE L1 0 2507 2263 617 230 0 0 chr17 5029631 5029757 -80408723 - FLAM_A SINE Alu -7 126 1 270 279 23 76 chr17 5029892 5030064 -80408416 - HAL1 LINE L1 -543 1964 1802 300 261 33 11 chr17 5030084 5030176 -80408304 - HAL1 LINE L1 -2090 417 324 37 81 0 0 chr17 5030502 5030588 -80407892 + AT_rich Low_complexity Low_complexity 1 86 0 1783 141 57 0 chr17 5030600 5030883 -80407597 - AluSx SINE Alu -13 299 1 2068 78 0 4 chr17 5030897 5031167 -80407313 - AluSx SINE Alu -11 301 33 333 115 0 0 chr17 5031618 5031679 -80406801 - AluJo SINE Alu -1 301 241 927 189 0 22 chr17 5031679 5031859 -80406621 - AluJo SINE Alu -136 176 1 430 276 104 27 chr17 5032515 5032736 -80405744 - MIR SINE MIR -12 250 13 443 231 56 0 chr17 5033846 5033954 -80404526 - MER81 DNA DNA 0 114 1 815 140 70 0 chr17 5034827 5034970 -80403510 - FAM SINE Alu -21 164 12 211 37 0 0 chr17 5035476 5035503 -80402977 + (TTTA)n Simple_repeat Simple_repeat 2 156 0 881 151 0 7 chr17 5035503 5035649 -80402831 - AluJb SINE Alu -1 310 140 2175 102 3 3 chr17 5035662 5035966 -80402514 - AluSx SINE Alu -8 304 1 297 252 26 52 chr17 5036300 5036415 -80402065 - L1ME LINE L1 -309 5855 5744 2037 120 3 0 chr17 5036819 5037111 -80401369 + AluSx SINE Alu 1 293 -19 362 267 17 97 chr17 5038320 5038487 -80399993 - MIR SINE MIR -19 243 89 2070 120 0 16 chr17 5038487 5038795 -80399685 + AluSx SINE Alu 1 303 -9 343 226 88 38 chr17 5038810 5038969 -80399511 - L1ME LINE L1 -770 5376 5210 657 192 146 0 chr17 5039141 5039271 -80399209 + FRAM SINE Alu 1 146 -30 21 82 0 0 chr17 5039603 5039652 -80398828 + AT_rich Low_complexity Low_complexity 1 49 0 446 214 65 54 chr17 5039730 5039898 -80398582 - L1ME4a LINE L1 0 6121 5952 2104 84 0 52 chr17 5039996 5040327 -80398153 - AluSx SINE Alu 0 315 1 1845 80 109 11 chr17 5040576 5040851 -80397629 - AluSc SINE Alu -7 302 1 1017 83 0 0 chr17 5040855 5040988 -80397492 - AluSq/x SINE Alu -180 133 1 227 247 86 37 chr17 5041593 5041674 -80396806 - MIR SINE MIR 0 262 178 539 246 16 0 chr17 5041720 5041842 -80396638 - MIR SINE MIR -77 185 62 215 265 0 0 chr17 5041878 5041927 -80396553 - L2 LINE L2 -227 3045 2997 1780 158 0 17 chr17 5041945 5042242 -80396238 + AluSx SINE Alu 1 292 -20 2346 87 0 0 chr17 5042845 5043154 -80395326 + AluSx SINE Alu 1 309 -3 414 273 77 28 chr17 5044240 5044383 -80394097 + MIR SINE MIR 77 226 -36 298 149 15 90 chr17 5045106 5045173 -80393307 - U7 snRNA snRNA -1 62 1 187 211 225 0 chr17 5045263 5045334 -80393146 + MIR3 SINE MIR 107 193 -15 225 0 0 0 chr17 5045948 5045973 -80392507 + (A)n Simple_repeat Simple_repeat 1 25 0 518 48 0 0 chr17 5045983 5046046 -80392434 + AluS SINE Alu 2 64 -248 1758 140 24 10 chr17 5046046 5046338 -80392142 + AluSx SINE Alu 16 311 -1 1191 191 108 0 chr17 5047476 5047717 -80390763 - MER21B LTR ERV1 -305 558 292 2959 147 75 10 chr17 5047988 5048506 -80389974 - MER21A LTR ERV1 -2 929 378 1639 103 63 16 chr17 5048513 5048765 -80389715 - MER21A LTR ERV1 -667 264 1 1591 126 89 0 chr17 5050615 5050886 -80387594 + AluSg SINE Alu 3 297 -13 1097 211 50 18 chr17 5050927 5051206 -80387274 - L1MB7 LINE L1 0 6184 5897 1855 92 42 0 chr17 5051220 5051482 -80386998 - AluSg SINE Alu -33 277 5 931 177 61 140 chr17 5051486 5051865 -80386615 - L1MB7 LINE L1 -838 5308 4960 2160 76 0 57 chr17 5052159 5052476 -80386004 - AluSc SINE Alu -10 299 1 2369 59 0 0 chr17 5053470 5053759 -80384721 + AluSc SINE Alu 13 301 -8 252 301 92 46 chr17 5054097 5054270 -80384210 - MIR3 SINE MIR -7 201 21 869 85 78 0 chr17 5056222 5056351 -80382129 + MER85 DNA T2_type 1 139 0 1814 155 7 0 chr17 5056723 5057019 -80381461 - AluSx SINE Alu -14 298 1 2179 112 0 6 chr17 5057728 5058041 -80380439 - AluSq SINE Alu -2 311 1 2148 101 0 0 chr17 5058051 5058338 -80380142 - AluSx SINE Alu -25 287 1 208 240 73 62 chr17 5058455 5058551 -80379929 - L2 LINE L2 -316 2956 2860 384 282 26 34 chr17 5058665 5058782 -80379698 + MIR3 SINE MIR 15 130 -78 189 171 0 0 chr17 5059435 5059470 -80379010 + (CATA)n Simple_repeat Simple_repeat 2 36 0 2252 94 0 0 chr17 5060793 5061090 -80377390 + AluSx SINE Alu 6 302 -10 2212 89 0 10 chr17 5061282 5061584 -80376896 + AluSg SINE Alu 1 299 -11 723 218 0 0 chr17 5061720 5061844 -80376636 + MER63A DNA MER1_type 50 173 -37 2139 96 7 7 chr17 5062588 5062891 -80375589 + AluSx SINE Alu 1 303 -9 253 234 252 47 chr17 5062963 5063070 -80375410 - L2 LINE L2 -2 3270 3142 811 219 14 0 chr17 5063083 5063229 -80375251 + MER58B DNA MER1_type 194 341 0 607 295 163 18 chr17 5063443 5063670 -80374810 - MIR SINE MIR -2 260 1 386 305 114 0 chr17 5063658 5063789 -80374691 - MIR SINE MIR 0 262 117 * 819 170 7 27 chr17 5063794 5063941 -80374539 + AluJ SINE Alu 2 145 -167 1718 166 0 17 chr17 5063943 5064245 -80374235 + AluJb SINE Alu 13 309 -3 22 0 0 0 chr17 5064277 5064299 -80374181 + AT_rich Low_complexity Low_complexity 1 22 0 1081 132 42 0 chr17 5064299 5064466 -80374014 + AluJ SINE Alu 129 302 -10 1527 170 22 58 chr17 5064683 5064994 -80373486 - AluJo SINE Alu 0 302 3 253 281 37 12 chr17 5065022 5065104 -80373376 + MIR SINE MIR 8 91 -171 361 335 64 6 chr17 5065721 5065894 -80372586 + MIR SINE MIR 80 262 0 347 306 116 16 chr17 5065965 5066086 -80372394 - MIR SINE MIR -58 150 18 1580 107 37 12 chr17 5066182 5066425 -80372055 + AluSx SINE Alu 47 295 -17 196 300 0 0 chr17 5066453 5066503 -80371977 + MER5A DNA MER1_type 81 130 -59 796 234 112 0 chr17 5067271 5067468 -80371012 + MER20 DNA MER1_type 1 219 0 269 253 72 24 chr17 5068212 5068295 -80370185 - L2 LINE L2 -953 2361 2275 262 303 64 9 chr17 5069096 5069205 -80369275 - L2 LINE L2 -176 3137 3023 2094 91 7 0 chr17 5069672 5069958 -80368522 + AluSx SINE Alu 1 288 -24 260 225 67 67 chr17 5070020 5070056 -80368424 + L2 LINE L2 3140 3175 -138 2174 91 7 13 chr17 5070056 5070364 -80368116 - AluSq SINE Alu -7 306 1 180 0 0 0 chr17 5070366 5070386 -80368094 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 1832 142 0 0 chr17 5070386 5070667 -80367813 - AluSx SINE Alu -31 281 1 260 225 67 67 chr17 5070667 5070715 -80367765 + L2 LINE L2 3174 3228 -85 898 164 0 44 chr17 5070739 5070922 -80367558 - AluJb SINE Alu -13 299 125 1317 163 47 57 chr17 5071090 5071391 -80367089 + AluJb SINE Alu 2 299 -3 222 37 0 0 chr17 5072016 5072043 -80366437 + (TG)n Simple_repeat Simple_repeat 2 28 0 2346 95 0 0 chr17 5072057 5072361 -80366119 - AluSx SINE Alu -8 304 1 446 117 0 0 chr17 5072429 5072489 -80365991 - Tigger5 DNA MER2_type 0 2323 2264 323 182 0 0 chr17 5072511 5072566 -80365914 + Tigger5 DNA MER2_type 1 55 -2268 248 86 224 52 chr17 5072535 5072593 -80365887 + Tigger5 DNA MER2_type 2251 2318 -5 * 309 289 51 64 chr17 5072669 5072825 -80365655 + MIR SINE MIR 59 212 -50 1859 146 3 3 chr17 5072904 5073206 -80365274 + AluSx SINE Alu 1 302 -10 39 0 0 0 chr17 5073206 5073245 -80365235 + AT_rich Low_complexity Low_complexity 1 39 0 590 100 0 0 chr17 5073245 5073325 -80365155 - AluSg/x SINE Alu -18 294 215 1697 129 19 0 chr17 5073328 5073584 -80364896 - AluSx SINE Alu -51 261 1 2084 102 3 3 chr17 5073729 5074023 -80364457 + AluSp SINE Alu 1 294 -19 336 330 40 17 chr17 5074512 5074688 -80363792 + MIR3 SINE MIR 20 199 -9 1178 164 45 0 chr17 5074952 5075153 -80363327 + AluJb SINE Alu 1 210 -102 444 167 0 83 chr17 5075691 5075787 -80362693 - Tigger7 DNA MER2_type -11 2476 2389 310 98 0 0 chr17 5075785 5075826 -80362654 - Tigger7 DNA MER2_type -284 266 226 * 2240 88 0 52 chr17 5076613 5076942 -80361538 - AluSx SINE Alu 0 312 1 209 364 53 30 chr17 5076953 5077085 -80361395 - L2 LINE L2 -5 3267 3133 753 117 8 17 chr17 5077646 5077766 -80360714 - AluJb SINE Alu -183 129 11 1033 273 145 26 chr17 5078055 5078640 -80359840 + L2 LINE L2 2661 3304 -9 486 278 88 78 chr17 5078647 5078827 -80359653 - L1ME4a LINE L1 -95 6026 5840 2480 69 0 0 chr17 5078827 5079132 -80359348 - AluSq SINE Alu -8 305 1 486 278 88 78 chr17 5079132 5079257 -80359223 - L1ME4a LINE L1 -281 5840 5718 185 330 11 78 chr17 5079780 5079959 -80358521 - L2 LINE L2 -76 3196 3030 1191 106 156 0 chr17 5081331 5081435 -80357045 - MER30 DNA MER1_type 0 230 144 195 42 0 0 chr17 5081435 5081459 -80357021 + (TTTTC)n Simple_repeat Simple_repeat 2 25 0 1191 106 156 0 chr17 5081459 5081553 -80356927 - MER30 DNA MER1_type -86 144 1 302 319 173 34 chr17 5082180 5082594 -80355886 - L2 LINE L2 -1010 2304 1822 917 164 41 55 chr17 5082594 5082813 -80355667 - MER20 DNA MER1_type -1 218 3 302 319 173 34 chr17 5082813 5082843 -80355637 - L2 LINE L2 -1492 1822 1798 192 304 139 13 chr17 5083167 5083246 -80355234 + L2 LINE L2 3166 3254 -18 2208 105 0 3 chr17 5083579 5083893 -80354587 - AluSq SINE Alu 0 313 1 1066 145 17 138 chr17 5084376 5084541 -80353939 + L1MA5 LINE L1 5601 5784 -519 1685 136 3 48 chr17 5084541 5084720 -80353760 - AluSx SINE Alu 0 305 144 2144 108 0 3 chr17 5084720 5085027 -80353453 - AluSg SINE Alu -3 307 2 1685 136 3 48 chr17 5085027 5085165 -80353315 - AluSx SINE Alu -161 144 1 1066 145 17 138 chr17 5085165 5085233 -80353247 + L1MA5 LINE L1 5784 5796 -507 1501 182 52 0 chr17 5085233 5085502 -80352978 - AluJb SINE Alu -19 283 1 1066 145 17 138 chr17 5085502 5085556 -80352924 + L1MA5 LINE L1 5796 5855 -448 186 194 76 6 chr17 5085728 5085799 -80352681 - MIR SINE MIR -31 177 100 2064 121 33 10 chr17 5085884 5086189 -80352291 - AluSp SINE Alu -1 312 1 2321 88 7 0 chr17 5086825 5087122 -80351358 - AluSp SINE Alu -14 299 1 30 0 0 0 chr17 5087128 5087158 -80351322 + AT_rich Low_complexity Low_complexity 1 30 0 2423 76 10 0 chr17 5087706 5088007 -80350473 - AluSg SINE Alu -6 304 1 576 169 127 28 chr17 5088030 5088172 -80350308 + Tigger1 DNA MER2_type 2 157 -2261 * 1096 158 32 50 chr17 5088161 5088382 -80350098 + Tigger1 DNA MER2_type 2202 2418 0 466 226 101 32 chr17 5088709 5088989 -80349491 + L1MB8 LINE L1 3120 3438 -2708 180 0 0 0 chr17 5089013 5089033 -80349447 + (A)n Simple_repeat Simple_repeat 1 20 0 2495 63 0 10 chr17 5089033 5089333 -80349147 + AluY SINE Alu 1 297 -14 2275 84 7 17 chr17 5089333 5089629 -80348851 + AluSc SINE Alu 1 293 -16 2213 103 3 7 chr17 5089633 5089934 -80348546 + AluSx SINE Alu 1 300 -12 1959 121 32 38 chr17 5090021 5090335 -80348145 + AluSx SINE Alu 1 312 0 480 199 14 55 chr17 5090362 5090508 -80347972 + L1MB8 LINE L1 3916 4055 -2091 1307 224 116 14 chr17 5090513 5090866 -80347614 - MLT1D LTR MaLR -2 503 115 1836 157 0 14 chr17 5090873 5091166 -80347314 - AluJb SINE Alu -23 289 1 382 198 124 8 chr17 5091166 5091287 -80347193 + L1MB8 LINE L1 5149 5283 -863 3615 162 51 48 chr17 5091305 5092003 -80346477 + L1MB8 LINE L1 5365 6067 -111 2228 106 0 3 chr17 5092003 5092296 -80346184 - AluSq SINE Alu -21 292 1 3615 162 51 48 chr17 5092296 5092404 -80346076 + L1MB8 LINE L1 6067 6173 -5 1875 127 46 3 chr17 5092406 5092689 -80345791 + AluSx SINE Alu 1 295 -17 1147 143 16 108 chr17 5092697 5092955 -80345525 + MER46A DNA MER2_type 2 235 -1 419 324 66 28 chr17 5093486 5093548 -80344932 + L2 LINE L2 2908 2966 -306 225 0 0 0 chr17 5093548 5093573 -80344907 + (CCCCAG)n Simple_repeat Simple_repeat 1 25 0 419 324 66 28 chr17 5093573 5093797 -80344683 + L2 LINE L2 2966 3205 -67 758 296 76 29 chr17 5093807 5094296 -80344184 + L2 LINE L2 1967 2478 -836 2211 122 0 3 chr17 5094490 5094793 -80343687 + AluSg SINE Alu 3 304 -6 1770 148 17 44 chr17 5094828 5094969 -80343511 + AluJb SINE Alu 1 144 -168 2274 90 3 17 chr17 5094969 5095268 -80343212 + AluSg SINE Alu 1 295 -15 1770 148 17 44 chr17 5095268 5095423 -80343057 + AluJb SINE Alu 144 289 -23 283 179 73 113 chr17 5095510 5095661 -80342819 + L1ME3 LINE L1 5940 6084 -78 372 282 77 45 chr17 5096948 5097202 -80341278 - MIR SINE MIR -4 258 1 1498 142 120 29 chr17 5097249 5097524 -80340956 + AluJo SINE Alu 1 300 -12 2376 87 7 0 chr17 5098042 5098340 -80340140 - AluSx SINE Alu -12 300 1 2341 103 7 0 chr17 5098428 5098728 -80339752 - AluSx SINE Alu -10 302 1 241 233 35 47 chr17 5099050 5099136 -80339344 + MARNA DNA Mariner 426 510 -76 2074 106 11 11 chr17 5099636 5099919 -80338561 + AluY SINE Alu 1 283 -28 2245 110 0 7 chr17 5099923 5100231 -80338249 + AluSx SINE Alu 1 306 -6 23 0 0 0 chr17 5105232 5105255 -80333225 + AT_rich Low_complexity Low_complexity 1 23 0 943 144 0 60 chr17 5105284 5105451 -80333029 - AluSq SINE Alu -21 292 136 2084 137 0 10 chr17 5105458 5105757 -80332723 - AluSx SINE Alu -16 296 1 2291 108 0 0 chr17 5105844 5106140 -80332340 + AluSx SINE Alu 3 298 -14 263 313 0 0 chr17 5108115 5108179 -80330301 - L2 LINE L2 -189 3083 3020 214 272 72 24 chr17 5108731 5108856 -80329624 - L2 LINE L2 -1552 1762 1632 2350 79 10 7 chr17 5110398 5110703 -80327777 + AluSp SINE Alu 1 306 -7 203 299 52 13 chr17 5111543 5111620 -80326860 - L2 LINE L2 0 3272 3193 891 175 6 47 chr17 5111878 5112049 -80326431 - FRAM SINE Alu -2 164 1 1544 128 128 12 chr17 5112085 5112361 -80326119 + AluSg SINE Alu 4 308 0 1574 154 0 55 chr17 5112502 5112814 -80325666 - AluJb SINE Alu -17 295 1 189 107 0 0 chr17 5113100 5113128 -80325352 + (A)n Simple_repeat Simple_repeat 1 28 0 2075 96 0 77 chr17 5113147 5113282 -80325198 + AluSx SINE Alu 1 145 -167 2120 113 3 28 chr17 5113282 5113600 -80324880 + AluSg SINE Alu 1 310 0 2075 96 0 77 chr17 5113600 5113788 -80324692 + AluSx SINE Alu 145 299 -13 1549 133 12 8 chr17 5113910 5114151 -80324329 + AluSx SINE Alu 55 296 -16 826 189 47 11 chr17 5114294 5114484 -80323996 + L1MB8 LINE L1 5842 6038 -140 432 0 0 0 chr17 5114486 5114534 -80323946 + (TG)n Simple_repeat Simple_repeat 2 49 0 755 161 35 0 chr17 5114558 5114701 -80323779 + L1MB7 LINE L1 6027 6174 -10 1870 134 13 17 chr17 5115170 5115468 -80323012 + AluSx SINE Alu 1 297 -15 2135 58 0 12 chr17 5115862 5116121 -80322359 - AluY SINE Alu -55 256 1 807 228 55 81 chr17 5116152 5116213 -80322267 - L1M4 LINE L1 -1455 4691 4630 1917 102 12 0 chr17 5116213 5116469 -80322011 + AluSp SINE Alu 37 295 -18 807 228 55 81 chr17 5116469 5116633 -80321847 - L1M4 LINE L1 -1516 4630 4463 2461 86 0 0 chr17 5116633 5116937 -80321543 - AluSc SINE Alu -4 305 2 2539 85 0 0 chr17 5116939 5117246 -80321234 - AluSq SINE Alu -6 307 1 807 228 55 81 chr17 5117246 5117363 -80321117 - L1M4 LINE L1 -1684 4462 4354 2513 64 0 0 chr17 5117363 5117659 -80320821 - AluY SINE Alu -15 296 1 1318 181 0 0 chr17 5117668 5117873 -80320607 - AluJb SINE Alu -23 289 85 2251 92 0 7 chr17 5117886 5118192 -80320288 - AluSx SINE Alu -8 304 1 2327 232 6 40 chr17 5118192 5118722 -80319758 - L1M4 LINE L1 -5697 845 334 500 239 26 0 chr17 5118726 5118843 -80319637 + L1M4 LINE L1 581 700 -5842 1001 133 0 0 chr17 5118868 5119018 -80319462 - AluSg/x SINE Alu -1 311 162 505 17 0 0 chr17 5119018 5119078 -80319402 - AluSp/q SINE Alu -16 297 238 1832 109 7 51 chr17 5119092 5119385 -80319095 - AluSx SINE Alu -32 280 1 1975 128 14 0 chr17 5119396 5119677 -80318803 - AluSx SINE Alu -7 305 21 888 182 50 0 chr17 5119761 5119917 -80318563 - MER20 DNA MER1_type -1 218 55 407 138 0 0 chr17 5119917 5119975 -80318505 + AluS SINE Alu 1 58 -250 180 0 0 0 chr17 5119991 5120011 -80318469 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 2506 65 0 7 chr17 5120012 5120319 -80318161 + AluY SINE Alu 1 305 -6 255 241 37 19 chr17 5120407 5120515 -80317965 + L1MC4 LINE L1 7932 8041 -1 905 278 229 50 chr17 5120564 5121036 -80317444 - L2 LINE L2 -1108 2206 1820 1605 164 114 0 chr17 5121036 5121316 -80317164 - AluJb SINE Alu 0 312 1 905 278 229 50 chr17 5121316 5121373 -80317107 - L2 LINE L2 -1494 1820 1775 2103 107 14 7 chr17 5121373 5121662 -80316818 + AluSg SINE Alu 1 291 -19 905 278 229 50 chr17 5121662 5122052 -80316428 - L2 LINE L2 -1539 1775 1121 1954 100 0 0 chr17 5122116 5122367 -80316113 - AluSg SINE Alu -6 304 54 754 292 104 39 chr17 5122441 5122797 -80315683 + LTR67 LTR ERVL 101 479 -78 2648 52 0 0 chr17 5122954 5123260 -80315220 - AluY SINE Alu -5 306 1 1657 181 56 3 chr17 5123504 5123792 -80314688 - AluJb SINE Alu -9 303 1 2273 92 27 0 chr17 5124656 5124949 -80313531 - AluSx SINE Alu -11 301 1 1068 219 75 67 chr17 5125319 5125373 -80313107 + Charlie7 DNA MER1_type 284 336 -2276 2443 75 0 0 chr17 5125373 5125668 -80312812 - AluY SINE Alu -16 295 1 2251 85 0 7 chr17 5125671 5125987 -80312493 - AluSg SINE Alu 0 314 1 1068 219 75 67 chr17 5125987 5126329 -80312151 + Charlie7 DNA MER1_type 337 688 -1924 1105 76 0 0 chr17 5126589 5126720 -80311760 - AluSg SINE Alu -179 131 1 425 287 21 122 chr17 5126941 5127227 -80311253 - L2 LINE L2 -20 3252 2996 862 234 172 39 chr17 5127346 5127619 -80310861 + L1MC4a LINE L1 5905 6140 -1668 2531 62 0 0 chr17 5127619 5127927 -80310553 + AluY SINE Alu 3 310 -1 862 234 172 39 chr17 5127927 5128118 -80310362 + L1MC4a LINE L1 6140 6431 -1377 968 262 121 32 chr17 5128120 5128623 -80309857 + L1MC4 LINE L1 7353 7900 -142 206 167 0 24 chr17 5128634 5128676 -80309804 + (CATA)n Simple_repeat Simple_repeat 4 44 0 2395 91 7 0 chr17 5128884 5129191 -80309289 + AluSp SINE Alu 1 309 -4 1851 103 0 8 chr17 5129759 5130012 -80308468 - AluSg SINE Alu -15 295 45 2148 97 7 29 chr17 5130826 5131135 -80307345 + AluSq SINE Alu 1 302 -11 2185 73 4 4 chr17 5131314 5131586 -80306894 + AluSg SINE Alu 1 272 -38 243 0 0 0 chr17 5131611 5131638 -80306842 + (TG)n Simple_repeat Simple_repeat 2 28 0 1986 131 31 0 chr17 5131822 5132112 -80306368 + AluSx SINE Alu 1 299 -13 2340 222 100 39 chr17 5132168 5133020 -80305460 + L1ME3A LINE L1 5267 6170 0 25 0 0 0 chr17 5133476 5133501 -80304979 + AT_rich Low_complexity Low_complexity 1 25 0 1945 79 86 11 chr17 5133829 5134109 -80304371 - AluSx SINE Alu -11 301 1 2092 124 10 0 chr17 5135041 5135348 -80303132 + AluSg SINE Alu 1 310 0 258 298 46 14 chr17 5136172 5136318 -80302162 + MIR SINE MIR 65 212 -50 307 370 58 23 chr17 5137476 5137649 -80300831 - L2 LINE L2 -4 3268 3090 325 324 171 11 chr17 5137692 5137967 -80300513 - L2 LINE L2 -929 2385 2067 2390 61 0 0 chr17 5137985 5138280 -80300200 - AluY SINE Alu -16 295 1 1292 196 116 7 chr17 5138329 5138605 -80299875 + L1MB5 LINE L1 5868 6173 -1 2486 67 0 3 chr17 5139187 5139487 -80298993 + AluY SINE Alu 1 299 -12 1934 134 0 20 chr17 5139499 5139805 -80298675 + AluJo SINE Alu 1 300 -12 1600 168 14 3 chr17 5139872 5140158 -80298322 - AluSx SINE Alu -10 302 14 21 0 0 0 chr17 5140195 5140216 -80298264 + AT_rich Low_complexity Low_complexity 1 21 0 1224 196 42 45 chr17 5140325 5140678 -80297802 + MER74A LTR ERVL 144 495 -63 2005 129 10 0 chr17 5140732 5141026 -80297454 + AluSx SINE Alu 1 297 -15 389 251 53 37 chr17 5141039 5141226 -80297254 + L1ME4a LINE L1 5753 5942 -179 2275 88 7 10 chr17 5141227 5141521 -80296959 + AluSg SINE Alu 1 293 -17 1415 108 47 9 chr17 5141544 5141757 -80296723 + AluJb SINE Alu 85 305 -7 407 216 88 24 chr17 5141801 5141926 -80296554 + L1ME4a LINE L1 5962 6094 -27 1253 157 10 10 chr17 5142048 5142245 -80296235 - AluSg/x SINE Alu -29 283 87 405 316 37 18 chr17 5143167 5143385 -80295095 - L2 LINE L2 -497 2817 2596 1704 171 10 14 chr17 5144409 5144701 -80293779 - AluJb SINE Alu -21 291 1 831 171 0 0 chr17 5144704 5144833 -80293647 - AluJo/FLAM SINE Alu -179 133 5 190 310 120 80 chr17 5144977 5145303 -80293177 - L2 LINE L2 -114 3158 2820 355 187 60 84 chr17 5145346 5145512 -80292968 + MIR SINE MIR 92 253 -9 382 105 0 0 chr17 5145554 5145611 -80292869 - Alu SINE Alu -2 299 243 325 298 53 7 chr17 5145847 5145998 -80292482 + L1MB7 LINE L1 5633 5790 -331 1780 159 3 24 chr17 5146071 5146367 -80292113 - AluJb SINE Alu -22 290 1 28 61 0 0 chr17 5146558 5146607 -80291873 + AT_rich Low_complexity Low_complexity 1 49 0 1399 79 129 10 chr17 5146737 5146939 -80291541 + MER30 DNA MER1_type 5 230 0 2610 44 0 0 chr17 5147486 5147782 -80290698 - AluY SINE Alu -15 296 1 344 213 98 41 chr17 5148032 5148154 -80290326 + MER103 DNA DNA 36 164 -2 1769 158 21 0 chr17 5148718 5149009 -80289471 + L1MB7 LINE L1 5882 6178 -6 2341 84 7 7 chr17 5149020 5149329 -80289151 + AluY SINE Alu 1 309 -2 191 418 0 0 chr17 5149506 5149597 -80288883 + L2 LINE L2 2956 3046 -226 2282 92 3 7 chr17 5149602 5149894 -80288586 + AluSp SINE Alu 1 291 -22 2004 138 0 0 chr17 5150427 5150753 -80287727 - AluSx SINE Alu 0 326 1 29 28 0 0 chr17 5151208 5151244 -80287236 + AT_rich Low_complexity Low_complexity 1 36 0 307 339 40 23 chr17 5151344 5151521 -80286959 - L1MC/D LINE L1 -2233 5811 5632 853 183 0 0 chr17 5151679 5151816 -80286664 + FLAM_C SINE Alu 3 139 -4 235 245 75 66 chr17 5152759 5152865 -80285615 - L1M1 LINE L1 -846 5457 5351 1083 119 0 36 chr17 5152893 5153061 -80285419 - AluSg/x SINE Alu -5 307 146 2510 71 0 0 chr17 5153079 5153390 -80285090 - AluY SINE Alu 0 311 1 1758 149 67 0 chr17 5153439 5153707 -80284773 - AluSx SINE Alu -26 286 1 271 229 57 43 chr17 5153718 5153858 -80284622 - L1MC/D LINE L1 -872 5510 5369 516 154 13 0 chr17 5153959 5154037 -80284443 - AluJ/FLAM SINE Alu -232 80 2 2027 112 32 0 chr17 5154047 5154332 -80284148 - AluSx SINE Alu -18 294 1 377 263 124 84 chr17 5154341 5154703 -80283777 - L1MC/D LINE L1 -1234 5148 4802 1524 132 123 8 chr17 5154703 5154954 -80283526 - AluSg1 SINE Alu -29 280 1 377 263 124 84 chr17 5154954 5155317 -80283163 - L1MC/D LINE L1 -1580 4802 4394 348 287 120 62 chr17 5155539 5156024 -80282456 - L1MC/D LINE L1 -2328 4054 3542 807 188 48 12 chr17 5156024 5156189 -80282291 - AluJo SINE Alu -19 293 123 373 265 103 7 chr17 5156194 5156330 -80282150 - L1MC/D LINE L1 -2875 3507 3359 2477 83 0 3 chr17 5156331 5156645 -80281835 - AluSq SINE Alu 0 313 1 244 279 15 0 chr17 5156847 5156915 -80281565 - MIR SINE MIR -27 235 167 506 224 20 61 chr17 5156925 5157072 -80281408 - MIR SINE MIR -58 204 64 405 270 110 19 chr17 5157167 5157485 -80280995 - L1MC/D LINE L1 -3530 2852 2506 2257 95 0 16 chr17 5157488 5157792 -80280688 - AluSx SINE Alu -11 301 3 870 248 0 0 chr17 5157794 5157955 -80280525 - AluJb SINE Alu -23 289 129 319 274 142 20 chr17 5157966 5158139 -80280341 - L1MC/D LINE L1 -3885 2499 2296 1517 172 54 37 chr17 5158139 5158435 -80280045 - AluJo SINE Alu -11 301 1 319 274 142 20 chr17 5158435 5158465 -80280015 - L1MC/D LINE L1 -4088 2296 2271 2168 92 7 26 chr17 5158725 5159029 -80279451 - AluSp SINE Alu -14 299 2 2427 57 0 27 chr17 5159606 5159906 -80278574 - AluY SINE Alu -19 292 1 22 0 0 0 chr17 5159907 5159929 -80278551 + AT_rich Low_complexity Low_complexity 1 22 0 1834 156 16 13 chr17 5160689 5161046 -80277434 + L1MC3 LINE L1 7450 7983 -12 205 305 95 48 chr17 5161415 5161520 -80276960 - L2 LINE L2 -3 3310 3201 452 223 31 136 chr17 5161525 5161812 -80276668 - L2 LINE L2 -78 3235 2979 446 299 162 5 chr17 5162272 5162476 -80276004 - MIR SINE MIR -21 241 6 1310 151 56 119 chr17 5162642 5162779 -80275701 + AluSx SINE Alu 1 145 -167 2372 90 0 0 chr17 5162779 5163078 -80275402 + AluSx SINE Alu 2 300 -12 1310 151 56 119 chr17 5163078 5163259 -80275221 + AluSx SINE Alu 145 299 -13 281 285 103 23 chr17 5163266 5163447 -80275033 + MLT1J LTR MaLR 2 159 -287 466 300 42 29 chr17 5163463 5163705 -80274775 + MLT1J LTR MaLR 305 499 -12 2348 90 0 0 chr17 5163848 5164147 -80274333 + AluY SINE Alu 1 299 -12 2263 86 3 35 chr17 5164400 5164713 -80273767 + AluSx SINE Alu 1 303 -9 21 0 0 0 chr17 5165434 5165455 -80273025 + AT_rich Low_complexity Low_complexity 1 21 0 511 254 163 14 chr17 5165542 5165751 -80272729 + MIR SINE MIR 13 252 -10 383 266 152 15 chr17 5165938 5166255 -80272225 - L1M3 LINE L1 -748 5398 5195 243 0 0 0 chr17 5166255 5166282 -80272198 + (A)n Simple_repeat Simple_repeat 1 27 0 1836 153 3 3 chr17 5166287 5166569 -80271911 - AluJo SINE Alu -30 282 1 300 330 102 0 chr17 5166660 5166778 -80271702 + MIR3 SINE MIR 4 133 -75 329 123 15 0 chr17 5167464 5167529 -80270951 + (TA)n Simple_repeat Simple_repeat 1 66 0 382 242 80 93 chr17 5167669 5167767 -80270713 - L1MC5 LINE L1 -49 7912 7814 2305 78 3 3 chr17 5167767 5168061 -80270419 - AluSq SINE Alu -19 294 1 382 242 80 93 chr17 5168061 5168350 -80270130 - L1MC5 LINE L1 -147 7814 7530 2096 75 65 0 chr17 5168360 5168639 -80269841 - AluSg SINE Alu -13 297 1 2023 159 0 3 chr17 5168639 5168947 -80269533 - AluJb SINE Alu -4 308 1 593 252 22 0 chr17 5169761 5169896 -80268584 + Tigger3(Golem) DNA MER2_type 2 139 -2890 2404 95 0 13 chr17 5169928 5170244 -80268236 - AluSx SINE Alu 0 312 1 1355 170 33 8 chr17 5170244 5170485 -80267995 + Tigger3(Golem) DNA MER2_type 2783 3029 0 4688 179 33 7 chr17 5170496 5171352 -80267128 - L1MC1 LINE L1 0 6333 5456 469 206 37 0 chr17 5171359 5171466 -80267014 - L1MC1 LINE L1 -941 5392 5282 * 1800 179 45 73 chr17 5171461 5171952 -80266528 - L1MA4 LINE L1 -1 7718 7242 1994 104 3 83 chr17 5171952 5172278 -80266202 - AluSq SINE Alu -12 301 2 6512 154 59 126 chr17 5172278 5174185 -80264295 - L1MA4 LINE L1 -638 7085 5327 2099 138 3 3 chr17 5174185 5174497 -80263983 - AluSx SINE Alu 0 312 1 6512 154 59 126 chr17 5174497 5174673 -80263807 - L1MA4 LINE L1 -2396 5327 5141 4768 208 50 45 chr17 5174678 5174915 -80263565 - L1MA4 LINE L1 -3528 4037 3803 1364 164 56 72 chr17 5174915 5175081 -80263399 - AluJo SINE Alu -12 300 140 2211 99 0 3 chr17 5175081 5175373 -80263107 - AluSq SINE Alu -22 291 1 1364 164 56 72 chr17 5175373 5175511 -80262969 - AluJo SINE Alu -172 140 1 4768 208 50 45 chr17 5175511 5175673 -80262807 - L1MA4 LINE L1 -3762 3803 3643 1775 163 10 10 chr17 5175673 5175829 -80262651 - AluJb SINE Alu -23 289 131 1992 149 0 3 chr17 5175829 5176130 -80262350 - AluJo SINE Alu -12 300 1 1775 163 10 10 chr17 5176130 5176262 -80262218 - AluJb SINE Alu -180 132 1 4768 208 50 45 chr17 5176262 5177628 -80260852 - L1MA4 LINE L1 -3922 3643 2254 2069 106 24 10 chr17 5177628 5177920 -80260560 + AluSx SINE Alu 1 296 -16 2245 101 10 3 chr17 5177933 5178241 -80260239 - AluSg SINE Alu 0 310 1 717 151 0 0 chr17 5178246 5178365 -80260115 - L1MA6 LINE L1 -5 6295 6177 1013 260 46 26 chr17 5178365 5178753 -80259727 - L1M4 LINE L1 -2284 3862 3490 239 132 0 0 chr17 5178887 5178925 -80259555 - L1MB8 LINE L1 0 6178 6141 3653 208 55 7 chr17 5178926 5179634 -80258846 - MER21B LTR ERV1 -86 777 36 204 40 0 0 chr17 5179639 5179664 -80258816 + (TA)n Simple_repeat Simple_repeat 1 25 0 2011 204 75 29 chr17 5179664 5180213 -80258267 - L1M4 LINE L1 -1960 4186 3613 997 169 0 11 chr17 5180213 5180391 -80258089 + AluSg/x SINE Alu 128 303 -9 2231 125 0 0 chr17 5180434 5180739 -80257741 - AluSx SINE Alu -7 305 1 2135 116 7 3 chr17 5180811 5181121 -80257359 - AluSx SINE Alu -1 311 1 472 269 133 50 chr17 5181169 5181416 -80257064 - HAL1 LINE L1 -856 1651 1426 2270 111 0 7 chr17 5181416 5181722 -80256758 - AluSx SINE Alu -8 304 1 472 269 133 50 chr17 5181722 5181932 -80256548 - HAL1 LINE L1 -1081 1426 1156 2538 57 0 0 chr17 5182474 5182771 -80255709 + AluY SINE Alu 1 297 -14 1693 104 0 0 chr17 5182830 5183060 -80255420 + AluSg/x SINE Alu 80 309 -1 2019 133 0 10 chr17 5184174 5184467 -80254013 - AluSx SINE Alu -22 290 1 2026 115 3 17 chr17 5184841 5185128 -80253352 + AluSx SINE Alu 1 283 -29 1437 217 64 31 chr17 5185156 5185571 -80252909 + Charlie2 DNA MER1_type 1854 2289 -573 2118 108 10 20 chr17 5185571 5185877 -80252603 - AluSg SINE Alu -7 303 1 1437 217 64 31 chr17 5185877 5185944 -80252536 + Charlie2 DNA MER1_type 2289 2352 -510 25 0 0 0 chr17 5186300 5186325 -80252155 + AT_rich Low_complexity Low_complexity 1 25 0 680 286 29 6 chr17 5186389 5186560 -80251920 + MER5A DNA MER1_type 1 175 -14 2267 90 0 0 chr17 5186566 5186855 -80251625 + AluSx SINE Alu 9 297 -15 443 276 91 22 chr17 5186897 5187060 -80251420 + Charlie2 DNA MER1_type 2509 2694 -168 1924 82 33 59 chr17 5187060 5187366 -80251114 + AluSg SINE Alu 1 298 -12 443 276 91 22 chr17 5187366 5187434 -80251046 + Charlie2 DNA MER1_type 2694 2756 -106 529 245 245 7 chr17 5187543 5187690 -80250790 + MER5A DNA MER1_type 7 188 -1 627 211 12 62 chr17 5187703 5187864 -80250616 - MER5A DNA MER1_type -36 153 1 2191 86 3 16 chr17 5187987 5188300 -80250180 - AluSp SINE Alu -4 309 1 255 256 23 35 chr17 5188388 5188474 -80250006 + L2 LINE L2 3229 3313 0 2360 77 0 0 chr17 5189142 5189440 -80249040 + AluSx SINE Alu 1 298 -14 2066 105 3 0 chr17 5190347 5190632 -80247848 - AluSx SINE Alu -26 286 1 225 204 74 0 chr17 5190701 5190755 -80247725 + Tigger5 DNA MER2_type 1 58 -2265 * 455 112 10 71 chr17 5190740 5190838 -80247642 + Tigger5 DNA MER2_type 2040 2131 -192 2208 95 0 0 chr17 5191029 5191323 -80247157 - AluSx SINE Alu -18 294 1 1023 152 92 0 chr17 5191431 5191615 -80246865 + Tigger5 DNA MER2_type 2121 2321 -2 2023 126 3 10 chr17 5193069 5193371 -80245109 - AluSq SINE Alu -13 300 1 2232 102 0 3 chr17 5193612 5193916 -80244564 - AluSq SINE Alu -9 304 2 1665 188 0 0 chr17 5194126 5194436 -80244044 + AluSx SINE Alu 1 310 0 1038 168 16 0 chr17 5194840 5195025 -80243455 + AluJo SINE Alu 1 188 -124 22 56 0 0 chr17 5195057 5195093 -80243387 + AT_rich Low_complexity Low_complexity 1 36 0 1944 138 0 0 chr17 5195127 5195424 -80243056 + AluSx SINE Alu 1 297 -15 470 323 81 44 chr17 5195516 5195860 -80242620 - L3 LINE CR1 -371 1206 850 180 345 0 0 chr17 5195921 5195979 -80242501 - L3 LINE CR1 -957 620 563 721 330 65 57 chr17 5196235 5196622 -80241858 + LTR67 LTR ERVL 36 429 -128 806 184 107 6 chr17 5196622 5196790 -80241690 + MER5A DNA MER1_type 2 186 -3 721 330 65 57 chr17 5196790 5196911 -80241569 + LTR67 LTR ERVL 429 548 -9 1570 180 80 43 chr17 5197096 5197469 -80241011 + L1MC3 LINE L1 7153 7539 -246 2232 97 0 0 chr17 5197641 5197949 -80240531 + AluSc SINE Alu 1 308 -1 915 166 137 66 chr17 5198297 5198508 -80239972 + L1MC5 LINE L1 6683 6908 -1053 298 182 268 71 chr17 5198566 5198714 -80239766 + L1MC5 LINE L1 7603 7721 -240 2465 50 0 0 chr17 5198714 5199012 -80239468 + AluY SINE Alu 1 298 -13 298 182 268 71 chr17 5199012 5199061 -80239419 + L1MC5 LINE L1 7721 7839 -122 474 189 277 14 chr17 5199825 5199973 -80238507 + MIR SINE MIR 5 191 -71 422 284 105 12 chr17 5200010 5200172 -80238308 - MIR SINE MIR -57 205 29 419 249 11 62 chr17 5200487 5200631 -80237849 + L1ME LINE L1 5627 5762 -359 1510 182 30 13 chr17 5200631 5200933 -80237547 + AluJb SINE Alu 1 307 -5 419 249 11 62 chr17 5200933 5200965 -80237515 + L1ME LINE L1 5762 5794 -327 454 300 65 39 chr17 5200991 5201108 -80237372 + L1ME LINE L1 3543 3655 -2491 2085 112 10 0 chr17 5201108 5201404 -80237076 + AluSp SINE Alu 1 299 -14 454 300 65 39 chr17 5201404 5201593 -80236887 + L1ME LINE L1 3655 3857 -2289 329 265 82 18 chr17 5201642 5201812 -80236668 + HAL1b LINE L1 76 256 -1092 239 248 114 78 chr17 5202039 5202265 -80236215 + L1ME LINE L1 5585 5826 -295 2014 115 0 23 chr17 5202265 5202569 -80235911 - AluSx SINE Alu -15 297 1 239 248 114 78 chr17 5202569 5202649 -80235831 + L1ME LINE L1 5826 5902 -219 999 143 0 0 chr17 5202792 5202953 -80235527 + MER2 DNA MER2_type 51 211 -134 1597 124 54 0 chr17 5202960 5203219 -80235261 - AluSg SINE Alu -1 309 37 355 234 0 0 chr17 5203223 5203287 -80235193 + MER2 DNA MER2_type 282 345 0 22 56 0 0 chr17 5203369 5203405 -80235075 + AT_rich Low_complexity Low_complexity 1 36 0 1382 171 89 0 chr17 5203664 5203933 -80234547 + AluJb SINE Alu 1 293 -19 1985 117 10 24 chr17 5204065 5204363 -80234117 - AluSp SINE Alu -19 294 1 1408 194 20 17 chr17 5204394 5204687 -80233793 + AluJb SINE Alu 6 299 -13 1895 139 17 0 chr17 5204687 5204989 -80233491 + AluSx SINE Alu 1 307 -5 23 0 0 0 chr17 5205044 5205067 -80233413 + AT_rich Low_complexity Low_complexity 1 23 0 270 296 145 48 chr17 5205111 5205462 -80233018 + L1ME4a LINE L1 5412 5822 -299 1750 138 18 7 chr17 5205462 5205745 -80232735 - AluSx SINE Alu -26 286 1 270 296 145 48 chr17 5205745 5205870 -80232610 + L1ME4a LINE L1 5822 5934 -187 25 51 0 0 chr17 5205884 5205923 -80232557 + AT_rich Low_complexity Low_complexity 1 39 0 1959 122 0 10 chr17 5205947 5206241 -80232239 - AluSg SINE Alu -18 292 2 1338 200 3 10 chr17 5206486 5206776 -80231704 + AluSx SINE Alu 11 298 -14 2389 54 0 3 chr17 5206983 5207279 -80231201 + AluY SINE Alu 1 295 -16 552 210 22 29 chr17 5207654 5207792 -80230688 + LTR41 LTR ERVL 594 730 -43 310 247 134 16 chr17 5207936 5208152 -80230328 + L1P LINE L1 5118 5358 -788 194 91 30 0 chr17 5208176 5208209 -80230271 + GA-rich Low_complexity Low_complexity 3 36 0 196 148 0 37 chr17 5208234 5208288 -80230192 + (GAAA)n Simple_repeat Simple_repeat 2 53 0 1888 143 0 7 chr17 5208367 5208674 -80229806 + AluSx SINE Alu 3 307 -5 2097 125 3 0 chr17 5208676 5208987 -80229493 + AluSx SINE Alu 1 312 0 201 316 0 0 chr17 5208991 5209048 -80229432 + L2 LINE L2 2718 2774 -540 196 311 33 0 chr17 5209143 5209204 -80229276 + L2 LINE L2 2995 3057 -215 1501 250 54 44 chr17 5209236 5209449 -80229031 + L2 LINE L2 2410 2619 -694 1751 144 28 11 chr17 5209449 5209733 -80228747 - AluJb SINE Alu -20 292 4 1501 250 54 44 chr17 5209733 5209747 -80228733 + L2 LINE L2 2619 2631 -682 2218 95 0 0 chr17 5209747 5210041 -80228439 - AluSx SINE Alu -5 307 14 1501 250 54 44 chr17 5210041 5210703 -80227777 + L2 LINE L2 2631 3309 -4 386 270 30 20 chr17 5210759 5210859 -80227621 + L2 LINE L2 3170 3270 -2 2176 97 0 0 chr17 5210867 5211157 -80227323 - AluSg SINE Alu -20 290 1 308 302 81 53 chr17 5211184 5211550 -80226930 + L1MC/D LINE L1 5466 5849 -321 592 274 47 16 chr17 5211573 5211763 -80226717 + MIR SINE MIR 37 232 -30 793 155 31 0 chr17 5211939 5212068 -80226412 + FLAM_C SINE Alu 1 133 0 22 0 0 0 chr17 5212377 5212399 -80226081 + AT_rich Low_complexity Low_complexity 1 22 0 1753 157 3 3 chr17 5212605 5212904 -80225576 + AluJb SINE Alu 1 299 -13 180 296 170 59 chr17 5214215 5214350 -80224130 - MIR3 SINE MIR -57 151 2 21 114 0 0 chr17 5214672 5214777 -80223703 + GC_rich Low_complexity Low_complexity 1 105 0 249 53 0 211 chr17 5215136 5215277 -80223203 + (GGGA)n Simple_repeat Simple_repeat 1 111 0 305 249 96 47 chr17 5215397 5215546 -80222934 + MIR3 SINE MIR 1 156 -65 201 238 313 0 chr17 5215632 5215712 -80222768 - L2 LINE L2 -4 3309 3205 2313 78 0 0 chr17 5215858 5216154 -80222326 - AluSg SINE Alu -14 296 1 250 278 0 0 chr17 5216254 5216308 -80222172 + MER115 DNA AcHobo 156 209 -484 2906 37 3 0 chr17 5216389 5216746 -80221734 + L1PA8 LINE L1 5817 6455 -14 2052 86 14 4 chr17 5216746 5217025 -80221455 + AluSg1 SINE Alu 1 282 -27 2906 37 3 0 chr17 5217025 5217041 -80221439 + L1PA8 LINE L1 6455 6469 0 1001 241 86 80 chr17 5217139 5217445 -80221035 + MER115 DNA AcHobo 304 614 -79 1989 125 3 13 chr17 5217445 5217756 -80220724 - AluSx SINE Alu 0 312 5 1001 241 86 80 chr17 5217756 5217835 -80220645 + MER115 DNA AcHobo 614 691 -2 1877 102 58 10 chr17 5218069 5218364 -80220116 + AluSx SINE Alu 1 309 -3 265 206 55 53 chr17 5218568 5218662 -80219818 + L1ME LINE L1 5606 5698 -423 275 272 87 0 chr17 5218736 5218828 -80219652 + L1ME LINE L1 5669 5768 -402 1164 90 0 0 chr17 5218850 5219005 -80219475 + AluY SINE Alu 139 293 -18 256 146 0 0 chr17 5219012 5219053 -80219427 + L1ME LINE L1 5788 5828 -342 2179 78 7 0 chr17 5219053 5219347 -80219133 + AluY SINE Alu 1 296 -15 560 306 151 39 chr17 5219369 5219860 -80218620 + L3 LINE CR1 967 1512 -65 2020 125 0 13 chr17 5219938 5220243 -80218237 + AluSx SINE Alu 1 301 -11 1224 125 0 0 chr17 5220900 5221076 -80217404 - AluSg/x SINE Alu -5 307 132 280 252 49 119 chr17 5221127 5221173 -80217307 + MIR SINE MIR 20 68 -194 2135 91 0 27 chr17 5221173 5221297 -80217183 + AluSx SINE Alu 11 137 -175 2144 87 0 14 chr17 5221297 5221613 -80216867 + AluY SINE Alu 1 312 0 2135 91 0 27 chr17 5221613 5221785 -80216695 + AluSx SINE Alu 137 300 -12 280 252 49 119 chr17 5221785 5221881 -80216599 + MIR SINE MIR 68 152 -110 2117 108 17 0 chr17 5222220 5222516 -80215964 - AluSx SINE Alu -11 301 1 198 0 0 0 chr17 5222539 5222561 -80215919 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 2042 109 0 0 chr17 5222563 5222847 -80215633 - AluSx SINE Alu -28 284 1 386 224 66 3 chr17 5223949 5224088 -80214392 + MIR SINE MIR 45 191 -70 2282 57 0 0 chr17 5224229 5224511 -80213969 - AluSq SINE Alu -7 306 25 2129 112 0 0 chr17 5224853 5225149 -80213331 + AluSc SINE Alu 1 296 -13 1959 127 3 7 chr17 5225517 5225817 -80212663 + AluSx SINE Alu 6 304 -8 254 256 70 0 chr17 5226083 5226169 -80212311 + (CACTG)n Simple_repeat Simple_repeat 4 95 0 2167 198 24 67 chr17 5226402 5226450 -80212030 - LTR31 LTR ERV1 -17 602 553 2449 40 3 7 chr17 5226450 5226750 -80211730 - AluY SINE Alu -12 299 1 2167 198 24 67 chr17 5226750 5227136 -80211344 - LTR31 LTR ERV1 -66 553 194 2198 100 10 10 chr17 5227136 5227445 -80211035 - AluSq SINE Alu -4 309 1 2167 198 24 67 chr17 5227445 5227560 -80210920 - LTR31 LTR ERV1 -425 194 76 1609 161 39 7 chr17 5227568 5227727 -80210753 - AluJo SINE Alu -16 296 123 270 0 0 0 chr17 5227727 5227757 -80210723 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 1609 161 39 7 chr17 5227757 5227882 -80210598 - AluJo SINE Alu -189 123 3 615 163 10 0 chr17 5228397 5228495 -80209985 + AluJ/FLAM SINE Alu 2 100 -212 674 173 17 12 chr17 5228533 5228706 -80209774 + GA-rich Low_complexity Low_complexity 5 178 0 2321 90 0 7 chr17 5228828 5229138 -80209342 + AluSx SINE Alu 2 309 -3 466 315 55 0 chr17 5229645 5229791 -80208689 - L2 LINE L2 -1 3312 3159 1701 179 0 3 chr17 5229860 5230156 -80208324 - AluJo SINE Alu -13 299 5 945 186 0 0 chr17 5230162 5230323 -80208157 - AluJb SINE Alu -16 296 136 2129 87 7 13 chr17 5230325 5230624 -80207856 - AluSg SINE Alu -9 301 5 805 93 0 0 chr17 5231009 5231116 -80207364 + AluSq/x SINE Alu 5 111 -202 948 208 16 0 chr17 5231134 5231195 -80207285 - AluJo SINE Alu -126 186 127 365 0 22 0 chr17 5231195 5231240 -80207240 + (TG)n Simple_repeat Simple_repeat 2 47 0 948 208 16 0 chr17 5231240 5231361 -80207119 - AluJo SINE Alu -185 127 1 2352 87 3 0 chr17 5231711 5232022 -80206458 + AluSx SINE Alu 1 312 0 2025 128 3 0 chr17 5232079 5232377 -80206103 - AluSx SINE Alu -13 299 1 786 262 50 57 chr17 5232649 5232931 -80205549 - MLT2F LTR ERVL -367 296 17 1221 192 28 0 chr17 5233034 5233289 -80205191 + L1MD3 LINE L1 7734 7995 0 927 85 4 2 chr17 5233473 5233730 -80204750 + AluSq SINE Alu 1 313 0 2173 105 0 13 chr17 5234459 5234772 -80203708 + AluSx SINE Alu 1 309 -3 182 342 0 51 chr17 5235545 5235624 -80202856 + L3b LINE CR1 1433 1507 -76 261 0 0 0 chr17 5235847 5235876 -80202604 + (TC)n Simple_repeat Simple_repeat 1 29 0 * 369 62 0 0 chr17 5235875 5235923 -80202557 + (CA)n Simple_repeat Simple_repeat 1 48 0 385 323 37 25 chr17 5235932 5236093 -80202387 + MIR SINE MIR 97 259 -3 297 256 136 48 chr17 5236141 5236266 -80202214 - MIR SINE MIR -74 188 53 217 167 0 30 chr17 5236973 5237039 -80201441 + GA-rich Low_complexity Low_complexity 2 65 0 263 226 17 52 chr17 5237048 5237163 -80201317 + (CAGAGA)n Simple_repeat Simple_repeat 6 116 0 531 273 14 7 chr17 5237245 5237384 -80201096 - MIR SINE MIR 0 262 123 748 258 220 18 chr17 5237590 5237931 -80200549 + L2 LINE L2 2904 3313 0 1174 301 46 26 chr17 5238204 5238619 -80199861 + LTR16A LTR ERVL 21 443 -7 577 303 12 47 chr17 5238645 5238899 -80199581 - L3 LINE CR1 -163 1414 1170 315 267 48 38 chr17 5240093 5240198 -80198282 - L2 LINE L2 -12 3260 3155 475 266 57 0 chr17 5240365 5240489 -80197991 + Charlie8 DNA MER1_type 92 222 -2195 304 309 0 94 chr17 5240582 5240731 -80197749 - L2 LINE L2 -238 3034 2900 2156 114 3 7 chr17 5240852 5241160 -80197320 + AluSx SINE Alu 5 311 -1 2098 220 50 45 chr17 5241284 5241820 -80196660 - MLT1G1 LTR MaLR -5 590 52 1496 178 23 33 chr17 5241823 5242311 -80196169 + AluJo SINE Alu 1 485 0 1128 71 0 33 chr17 5242127 5242355 -80196125 + (GAAA)n Simple_repeat Simple_repeat 3 224 0 1166 290 6 9 chr17 5242381 5242702 -80195778 - L2 LINE L2 -1018 2296 1977 195 296 26 70 chr17 5242716 5242831 -80195649 - L2 LINE L2 -563 2751 2642 2188 88 0 0 chr17 5243308 5243602 -80194878 + AluY SINE Alu 1 294 -17 214 239 226 9 chr17 5244280 5244437 -80194043 + MIR SINE MIR 35 262 0 808 236 106 22 chr17 5244676 5245123 -80193357 - LTR33A LTR ERVL 0 523 2 503 301 162 27 chr17 5245644 5246009 -80192471 + L2 LINE L2 2900 3313 0 222 265 0 0 chr17 5246009 5246077 -80192403 + (TAGA)n Simple_repeat Simple_repeat 2 69 0 230 336 35 0 chr17 5246091 5246204 -80192276 + (TGGA)n Simple_repeat Simple_repeat 1 117 0 299 227 10 0 chr17 5246211 5246308 -80192172 + (TGGG)n Simple_repeat Simple_repeat 2 99 0 1306 224 33 15 chr17 5246736 5247066 -80191414 + MLT2C1 LTR ERVL 1 336 -61 374 119 0 15 chr17 5247070 5247137 -80191343 + (CATATA)n Simple_repeat Simple_repeat 6 71 0 234 277 67 118 chr17 5247763 5247958 -80190522 - L2 LINE L2 -93 3179 2995 665 316 14 19 chr17 5247985 5248194 -80190286 - MIR SINE MIR -18 244 37 1723 175 3 0 chr17 5248223 5248508 -80189972 - AluJb SINE Alu -26 286 1 22 35 0 0 chr17 5248733 5248762 -80189718 + AT_rich Low_complexity Low_complexity 1 29 0 547 190 28 28 chr17 5248854 5248996 -80189484 + MER96B DNA MER1_type? 192 333 -84 418 330 19 39 chr17 5249074 5249280 -80189200 - L2 LINE L2 -433 2881 2680 2175 122 39 28 chr17 5249451 5249813 -80188667 + THE1C LTR MaLR 8 373 -2 2332 163 18 50 chr17 5250220 5250722 -80187758 + L1ME2 LINE L1 5677 6162 -2 1016 156 28 69 chr17 5250835 5251053 -80187427 + MER3 DNA MER1_type 1 209 0 263 369 63 0 chr17 5251268 5251379 -80187101 - HAL1 LINE L1 -1635 872 755 492 309 114 61 chr17 5251511 5251951 -80186529 - HAL1 LINE L1 -2044 463 1 369 290 30 38 chr17 5253584 5253715 -80184765 - MLT1J LTR MaLR -152 359 230 2200 98 0 0 chr17 5253715 5254012 -80184468 + AluY SINE Alu 1 297 -14 467 235 115 68 chr17 5254039 5254273 -80184207 - MLT1J LTR MaLR -257 254 10 213 389 0 8 chr17 5255901 5256027 -80182453 + (CA)n Simple_repeat Simple_repeat 1 125 0 2120 103 0 3 chr17 5256286 5256578 -80181902 + AluSx SINE Alu 1 291 -21 2065 166 133 33 chr17 5256622 5257080 -80181400 - MLT1D LTR MaLR -1 504 1 2086 111 13 0 chr17 5257195 5257502 -80180978 - AluSx SINE Alu -1 311 1 763 244 29 6 chr17 5257509 5257681 -80180799 + MIR SINE MIR 48 223 -39 251 273 55 9 chr17 5258036 5258146 -80180334 - MLT1G1-int LTR MaLR -1618 117 3 360 204 48 39 chr17 5258148 5258251 -80180229 - MLT1G1 LTR MaLR 0 549 446 461 274 0 0 chr17 5258384 5258486 -80179994 + MIR SINE MIR 45 146 -62 1874 125 36 0 chr17 5258488 5258769 -80179711 + AluJo SINE Alu 2 292 -20 736 262 4 42 chr17 5259148 5259385 -80179095 - MLT2F LTR ERVL 0 663 436 2905 195 84 14 chr17 5259399 5259494 -80178986 - MER63C DNA MER1_type -143 917 830 1748 134 42 18 chr17 5259494 5259778 -80178702 + AluSx SINE Alu 1 291 -21 2905 195 84 14 chr17 5259778 5260303 -80178177 - MER63C DNA MER1_type -230 830 254 1417 263 36 39 chr17 5260344 5260755 -80177725 - MLT2F LTR ERVL -237 426 17 254 193 0 53 chr17 5260838 5260895 -80177585 - MLT2F LTR ERVL -593 70 17 1264 249 75 48 chr17 5262598 5262980 -80175500 - MLT1G1 LTR MaLR -210 341 1 1882 156 10 0 chr17 5263251 5263546 -80174934 + AluSx SINE Alu 1 298 -14 1266 213 39 110 chr17 5263671 5264163 -80174317 - MLT2B1 LTR ERVL -62 458 2 275 277 116 18 chr17 5264421 5264533 -80173947 - L2 LINE L2 -18 3254 3132 2167 105 3 10 chr17 5264913 5265333 -80173147 - AluSx SINE Alu 0 418 1 565 272 52 28 chr17 5265400 5265578 -80172902 - MIR SINE MIR -33 229 44 2002 146 26 19 chr17 5265578 5265955 -80172525 - L1MA4 LINE L1 -6 6294 5915 565 272 52 28 chr17 5265955 5265989 -80172491 - MIR SINE MIR -218 44 12 791 142 80 40 chr17 5266469 5266645 -80171835 + MER96B DNA MER1_type? 1 183 -234 195 42 0 0 chr17 5266785 5266809 -80171671 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 2145 103 0 3 chr17 5266845 5267147 -80171333 - AluSg SINE Alu -9 301 1 29 28 0 0 chr17 5267237 5267273 -80171207 + AT_rich Low_complexity Low_complexity 1 36 0 1570 295 108 49 chr17 5267313 5267509 -80170971 - L1M4c LINE L1 -2005 4377 4194 2486 24 3 3 chr17 5267509 5267803 -80170677 - AluY SINE Alu -17 294 1 1570 295 108 49 chr17 5267803 5268298 -80170182 - L1M4c LINE L1 -2188 4194 3729 2245 109 0 3 chr17 5268298 5268609 -80169871 - AluSx SINE Alu -2 310 1 1570 295 108 49 chr17 5268609 5269562 -80168918 - L1M4c LINE L1 -2653 3729 2636 306 257 197 52 chr17 5269654 5269801 -80168679 - L1M4c LINE L1 -4019 2544 2420 2407 76 0 0 chr17 5269801 5270105 -80168375 - AluSg SINE Alu -6 304 1 306 257 197 52 chr17 5270105 5270206 -80168274 - L1M4c LINE L1 -4143 2420 2260 21 95 0 0 chr17 5270255 5270318 -80168162 + AT_rich Low_complexity Low_complexity 1 63 0 258 258 40 115 chr17 5270545 5270734 -80167746 - L1M4c LINE L1 -738 2005 1803 189 0 0 0 chr17 5270734 5270755 -80167725 + (TTAA)n Simple_repeat Simple_repeat 2 22 0 1560 184 7 0 chr17 5270758 5271046 -80167434 - AluJb SINE Alu -22 290 1 258 258 40 115 chr17 5271046 5271189 -80167291 - L1M4c LINE L1 -942 1801 1551 204 40 0 0 chr17 5271492 5271517 -80166963 + (TCCCC)n Simple_repeat Simple_repeat 3 27 0 1980 113 29 26 chr17 5271517 5271827 -80166653 - AluSx SINE Alu -1 311 1 254 291 47 12 chr17 5271908 5271994 -80166486 - MIR SINE MIR -48 214 126 479 284 41 50 chr17 5272254 5272472 -80166008 + L3b LINE CR1 1273 1488 -95 1564 169 7 36 chr17 5272819 5273120 -80165360 - AluJb SINE Alu -20 292 1 2249 82 0 0 chr17 5273181 5273475 -80165005 - AluSc SINE Alu -15 294 1 327 347 0 40 chr17 5273612 5273736 -80164744 + L2 LINE L2 3154 3272 0 279 282 59 0 chr17 5274150 5274235 -80164245 + L2 LINE L2 3204 3293 -20 215 335 52 31 chr17 5274984 5275175 -80163305 + L2 LINE L2 2563 2757 -557 541 336 92 36 chr17 5275217 5275628 -80162852 + L2 LINE L2 2831 3264 -8 924 250 113 76 chr17 5275818 5276306 -80162174 + LTR33A LTR ERVL 10 515 -8 2361 91 0 0 chr17 5277192 5277500 -80160980 - AluSg SINE Alu -2 308 1 351 273 89 99 chr17 5277608 5278022 -80160458 - L2 LINE L2 -18 3254 2845 411 266 75 44 chr17 5279490 5279681 -80158799 - MIR SINE MIR -67 141 3 21 0 0 0 chr17 5279811 5279832 -80158648 + AT_rich Low_complexity Low_complexity 1 21 0 808 245 135 5 chr17 5279959 5280167 -80158313 + MIR SINE MIR 28 262 0 230 266 43 21 chr17 5280284 5280378 -80158102 - L1ME LINE L1 -349 5817 5722 2255 87 3 7 chr17 5280702 5281011 -80157469 + AluSg SINE Alu 1 308 -2 592 205 111 8 chr17 5281107 5281224 -80157256 - MIR SINE MIR -71 191 63 228 35 0 0 chr17 5281633 5281662 -80156818 + (CAAAAA)n Simple_repeat Simple_repeat 3 31 0 251 239 43 123 chr17 5281995 5282158 -80156322 + L2 LINE L2 2935 3084 -188 339 355 8 0 chr17 5282439 5282560 -80155920 + L3 LINE CR1 695 816 -761 318 233 35 35 chr17 5282740 5282826 -80155654 + L2 LINE L2 3228 3313 0 1913 96 46 7 chr17 5282878 5283160 -80155320 - AluSq SINE Alu -20 293 1 264 324 185 0 chr17 5283347 5283455 -80155025 + L2 LINE L2 3143 3270 -2 2052 105 0 0 chr17 5283623 5283899 -80154581 - AluSx SINE Alu -36 276 1 483 345 66 12 chr17 5284728 5284986 -80153494 - MLT1L LTR MaLR -5 610 339 337 279 36 18 chr17 5285012 5285123 -80153357 - MLT1L LTR MaLR -322 293 181 240 186 0 0 chr17 5285173 5285216 -80153264 - MLT1L LTR MaLR -431 184 142 2106 124 3 0 chr17 5285271 5285577 -80152903 - AluSx SINE Alu -5 307 1 601 209 51 19 chr17 5285577 5285735 -80152745 - MLT1H LTR MaLR -4 545 383 1785 160 3 22 chr17 5285972 5286285 -80152195 + AluJb SINE Alu 1 307 -5 303 252 66 18 chr17 5286604 5286729 -80151751 - MIR SINE MIR -47 161 33 189 250 75 25 chr17 5286886 5286966 -80151514 + L2 LINE L2 3191 3274 -39 406 368 16 11 chr17 5287015 5287205 -80151275 - MIR SINE MIR -70 192 2 2437 90 3 0 chr17 5287350 5287651 -80150829 - AluSp SINE Alu -11 302 1 430 248 58 82 chr17 5287656 5287700 -80150780 - MIR SINE MIR -49 213 169 1776 181 0 10 chr17 5287700 5287999 -80150481 + AluJo SINE Alu 1 296 -16 430 248 58 82 chr17 5287999 5288160 -80150320 - MIR SINE MIR -93 169 13 735 240 18 98 chr17 5289348 5289623 -80148857 - MIR SINE MIR -2 260 8 334 343 45 0 chr17 5289955 5290089 -80148391 + MIR3 SINE MIR 48 187 -21 1917 204 24 13 chr17 5290463 5290925 -80147555 + L1M4 LINE L1 4817 5283 -863 2006 113 23 30 chr17 5290928 5291249 -80147231 + AluSx SINE Alu 2 312 0 1015 193 0 0 chr17 5291251 5291422 -80147058 + AluSg/x SINE Alu 136 306 -6 570 160 40 8 chr17 5291422 5291547 -80146933 + L1MB8 LINE L1 6049 6177 -1 655 204 119 6 chr17 5291547 5291723 -80146757 + MIR SINE MIR 19 214 -48 239 283 33 0 chr17 5291755 5291815 -80146665 + L2 LINE L2 3157 3218 -54 2191 116 0 3 chr17 5291852 5292154 -80146326 + AluSx SINE Alu 1 301 -11 1855 150 56 3 chr17 5292168 5292454 -80146026 + AluSx SINE Alu 1 301 -11 37 81 0 0 chr17 5292466 5292552 -80145928 + AT_rich Low_complexity Low_complexity 1 86 0 291 261 33 11 chr17 5292878 5292970 -80145510 + HAL1 LINE L1 324 417 -2090 264 304 24 60 chr17 5292994 5293162 -80145318 + HAL1 LINE L1 1803 1964 -543 540 211 8 23 chr17 5293297 5293425 -80145055 + FLAM_A SINE Alu 1 126 -7 230 293 78 62 chr17 5293490 5293746 -80144734 + HAL1 LINE L1 2248 2507 0 1785 190 3 7 chr17 5293749 5294059 -80144421 + AluJo SINE Alu 1 309 -3 1864 152 24 7 chr17 5294272 5294562 -80143918 - AluJo SINE Alu -17 295 1 914 145 7 22 chr17 5294641 5294779 -80143701 - AluJo SINE Alu -176 136 1 239 219 67 92 chr17 5294781 5294848 -80143632 - MER112 DNA MER1_type -144 116 52 2439 80 0 3 chr17 5294848 5295147 -80143333 - AluY SINE Alu -13 298 1 239 219 67 92 chr17 5295147 5295198 -80143282 - MER112 DNA MER1_type -208 52 1 2452 92 0 0 chr17 5295334 5295640 -80142840 - AluSx SINE Alu -6 306 1 27 62 0 0 chr17 5297549 5297597 -80140883 + GC_rich Low_complexity Low_complexity 1 48 0 274 236 33 93 chr17 5298222 5298404 -80140076 - L1ME4a LINE L1 -16 6105 5935 296 143 32 0 chr17 5299018 5299081 -80139399 + L1M4 LINE L1 5498 5562 -612 2156 117 3 7 chr17 5299085 5299384 -80139096 - AluSx SINE Alu -14 298 1 262 233 11 79 chr17 5299746 5299935 -80138545 + (GAATG)n Simple_repeat Simple_repeat 2 177 0 189 0 0 0 chr17 5300931 5300952 -80137528 + (CAG)n Simple_repeat Simple_repeat 2 22 0 406 313 33 7 chr17 5300952 5301102 -80137378 - MIR SINE MIR -12 250 97 2324 104 0 0 chr17 5301131 5301420 -80137060 + AluSx SINE Alu 1 289 -23 294 29 0 0 chr17 5301421 5301456 -80137024 + (AATAG)n Simple_repeat Simple_repeat 4 38 0 189 0 0 0 chr17 5301716 5301737 -80136743 + (TGG)n Simple_repeat Simple_repeat 1 21 0 2128 257 94 34 chr17 5301828 5302467 -80136013 - MER45C DNA AcHobo -275 678 2 2228 117 3 0 chr17 5302796 5303095 -80135385 + AluSq SINE Alu 1 300 -13 2808 162 32 13 chr17 5303190 5303403 -80135077 + L1MB3 LINE L1 5618 5825 -358 2388 88 0 31 chr17 5303403 5303721 -80134759 + AluSq SINE Alu 1 308 -5 2808 162 32 13 chr17 5303721 5304062 -80134418 + L1MB3 LINE L1 5825 6183 0 257 0 30 0 chr17 5304104 5304137 -80134343 + (TTAAA)n Simple_repeat Simple_repeat 2 35 0 2023 140 0 40 chr17 5304206 5304341 -80134139 + AluSx SINE Alu 1 140 -172 2131 104 17 24 chr17 5304341 5304638 -80133842 + AluY SINE Alu 1 295 -16 2416 85 0 0 chr17 5304647 5304942 -80133538 + AluSg SINE Alu 1 295 -15 2023 140 0 40 chr17 5304942 5305117 -80133363 + AluSx SINE Alu 148 308 -4 711 192 8 0 chr17 5305117 5305242 -80133238 - FLAM_C SINE Alu -6 127 2 436 320 78 24 chr17 5305246 5305577 -80132903 + L1ME4a LINE L1 5567 5915 -206 470 143 0 0 chr17 5306371 5306441 -80132039 - AluSq SINE Alu -23 290 221 1059 136 0 19 chr17 5306444 5306598 -80131882 - AluSq SINE Alu -161 151 1 712 153 0 24 chr17 5306855 5306979 -80131501 - FLAM_C SINE Alu -1 142 22 1340 129 35 139 chr17 5306994 5307160 -80131320 - AluJo SINE Alu -17 295 174 2109 120 3 27 chr17 5307160 5307460 -80131020 - AluSx SINE Alu -19 293 1 1340 129 35 139 chr17 5307460 5307603 -80130877 - AluJo SINE Alu -138 174 18 211 310 110 20 chr17 5307609 5307709 -80130771 + L2 LINE L2 3173 3281 -32 * 222 293 158 56 chr17 5307707 5307922 -80130558 - MIR SINE MIR -6 256 20 2434 62 0 32 chr17 5307942 5308250 -80130230 + AluSx SINE Alu 1 298 -14 489 220 23 12 chr17 5308514 5308687 -80129793 + CT-rich Low_complexity Low_complexity 4 178 0 966 188 6 0 chr17 5309406 5309582 -80128898 + MER45A DNA AcHobo 1 177 -1 777 143 40 0 chr17 5309595 5309721 -80128759 - MER41B LTR ERV1 -375 260 130 443 139 60 114 chr17 5309840 5310006 -80128474 + MER41B-int LTR ERV1 5923 6079 -252 698 195 31 0 chr17 5310056 5310184 -80128296 - FLAM_C SINE Alu 0 133 2 809 238 78 4 chr17 5310289 5310533 -80127947 + MER41B-int LTR ERV1 6412 6673 -3 2329 151 24 10 chr17 5310533 5310943 -80127537 + MER41B LTR ERV1 111 526 -109 26 74 0 0 chr17 5310943 5310997 -80127483 + AT_rich Low_complexity Low_complexity 1 54 0 403 115 16 0 chr17 5311002 5311063 -80127417 - U7 snRNA snRNA 0 63 2 316 211 8 40 chr17 5311063 5311185 -80127295 + MER41A LTR ERV1 395 466 -12 401 195 35 0 chr17 5312439 5312526 -80125954 - MIR3 SINE MIR -6 202 113 197 273 196 42 chr17 5312568 5312711 -80125769 - L3 LINE CR1 -70 1507 1343 569 344 129 35 chr17 5312762 5313353 -80125127 + L3 LINE CR1 733 1378 -199 521 232 73 40 chr17 5313393 5313544 -80124936 - MIR SINE MIR -60 202 47 2082 126 7 0 chr17 5314184 5314477 -80124003 - AluY SINE Alu -15 296 2 875 281 87 99 chr17 5314957 5315361 -80123119 + L2 LINE L2 2234 2642 -671 1095 195 172 19 chr17 5315361 5315622 -80122858 - AluJo SINE Alu -1 301 1 2018 128 0 39 chr17 5315631 5315798 -80122682 - AluSx SINE Alu -12 300 149 2481 78 0 0 chr17 5315798 5316094 -80122386 - AluY SINE Alu -15 296 1 2018 128 0 39 chr17 5316094 5316238 -80122242 - AluSx SINE Alu -163 149 1 2215 109 0 7 chr17 5316238 5316540 -80121940 - AluSq SINE Alu -13 300 1 875 281 87 99 chr17 5316540 5316641 -80121839 + L2 LINE L2 2649 2750 -563 2494 91 3 0 chr17 5316641 5316948 -80121532 - AluSx SINE Alu -4 308 1 875 281 87 99 chr17 5316948 5317197 -80121283 + L2 LINE L2 2750 2990 -323 994 210 23 14 chr17 5317197 5317416 -80121064 + MER90 LTR ERV1 392 612 -2 2536 84 0 0 chr17 5318609 5318917 -80119563 - AluSq SINE Alu -5 308 1 2097 146 16 14 chr17 5319013 5319377 -80119103 + MLT1A1 LTR MaLR 1 365 0 1094 198 0 0 chr17 5319931 5320108 -80118372 + FRAM SINE Alu 1 176 0 367 158 13 13 chr17 5320297 5320373 -80118107 + LTR67 LTR ERVL 460 535 -22 1790 117 44 0 chr17 5320718 5320966 -80117514 - AluSx SINE Alu -14 298 40 305 267 69 0 chr17 5321452 5321553 -80116927 - MIR SINE MIR -72 136 29 316 247 0 14 chr17 5321634 5321707 -80116773 + MER81 DNA DNA 1 72 -42 360 335 95 13 chr17 5321988 5322146 -80116334 - L2 LINE L2 0 3272 3102 540 303 160 0 chr17 5322433 5322627 -80115853 + MIR SINE MIR 1 220 -42 2087 137 3 10 chr17 5322772 5323072 -80115408 - AluJb SINE Alu -14 298 1 787 221 35 0 chr17 5323439 5323611 -80114869 + MER45A DNA AcHobo 1 178 0 1534 98 31 9 chr17 5323943 5324168 -80114312 + MER30 DNA MER1_type 1 230 0 292 331 25 43 chr17 5324341 5324504 -80113976 + MIR SINE MIR 103 262 0 463 304 39 68 chr17 5325872 5326158 -80112322 - L1MEc LINE L1 -4923 1387 1109 2443 72 7 0 chr17 5326158 5326463 -80112017 - AluY SINE Alu -4 307 1 463 304 39 68 chr17 5326463 5326485 -80111995 - L1MEc LINE L1 -5201 1109 1088 402 295 65 11 chr17 5326488 5326749 -80111731 - L1MEc LINE L1 -5193 926 652 550 286 80 24 chr17 5326809 5327022 -80111458 + LTR33 LTR ERVL 297 521 0 206 261 43 14 chr17 5327526 5327595 -80110885 - L2 LINE L2 -3 3269 3199 * 631 310 47 5 chr17 5327589 5327802 -80110678 + MIR SINE MIR 5 226 -36 588 12 0 36 chr17 5327938 5328022 -80110458 + (TCTA)n Simple_repeat Simple_repeat 4 84 0 1813 179 0 11 chr17 5328023 5328308 -80110172 - AluJb SINE Alu -30 282 1 263 263 92 0 chr17 5328554 5328630 -80109850 + L2 LINE L2 3153 3235 -37 874 229 51 85 chr17 5328642 5328750 -80109730 + L1MC5 LINE L1 7485 7595 -400 1960 136 0 14 chr17 5328750 5329037 -80109443 + AluSx SINE Alu 1 283 -29 225 65 0 0 chr17 5329037 5329068 -80109412 + (CAAAC)n Simple_repeat Simple_repeat 2 32 0 874 229 51 85 chr17 5329068 5329428 -80109052 + L1MC5 LINE L1 7593 7990 -5 1311 198 55 26 chr17 5330071 5330344 -80108136 + AluJb SINE Alu 1 281 -31 189 0 0 0 chr17 5330344 5330365 -80108115 + (T)n Simple_repeat Simple_repeat 1 21 0 2016 150 3 25 chr17 5330868 5331182 -80107298 + AluJo SINE Alu 1 307 -5 491 369 84 8 chr17 5331199 5331689 -80106791 + L2 LINE L2 2373 2899 -415 * 897 110 18 78 chr17 5331675 5331731 -80106749 - MER5A DNA MER1_type -4 185 127 2431 82 0 0 chr17 5331731 5332023 -80106457 + AluSg SINE Alu 1 292 -18 897 110 18 78 chr17 5332023 5332160 -80106320 - MER5A DNA MER1_type -62 127 5 702 251 174 20 chr17 5332159 5332510 -80105970 + L2 LINE L2 2868 3272 0 * 182 146 0 24 chr17 5332708 5332749 -80105731 + (ATGGTG)n Simple_repeat Simple_repeat 6 45 0 2349 117 0 0 chr17 5332930 5333238 -80105242 - AluSg SINE Alu -2 308 1 1291 124 0 0 chr17 5333238 5333415 -80105065 - AluY SINE Alu -8 303 127 1051 227 99 16 chr17 5333835 5334157 -80104323 - LTR16A LTR ERVL -4 446 98 517 284 119 35 chr17 5335122 5335516 -80102964 + L2 LINE L2 2862 3288 -25 246 62 0 0 chr17 5335517 5335549 -80102931 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 25 31 0 0 chr17 5335653 5335685 -80102795 + AT_rich Low_complexity Low_complexity 1 32 0 2076 101 40 4 chr17 5335685 5335962 -80102518 - AluSx SINE Alu -25 287 1 492 200 83 0 chr17 5335980 5336100 -80102380 - MIR SINE MIR -72 190 61 245 184 13 92 chr17 5336697 5336773 -80101707 - AluYb8 SINE Alu -1 307 238 * 359 62 0 0 chr17 5336742 5336790 -80101690 - Alu SINE Alu -254 48 1 714 284 80 12 chr17 5336810 5337134 -80101346 + L1MC4a LINE L1 5591 5936 -1872 371 307 37 0 chr17 5337345 5337471 -80101009 + MIR SINE MIR 27 160 -48 2052 146 0 3 chr17 5337832 5338133 -80100347 - AluSx SINE Alu -7 305 6 190 211 79 0 chr17 5338317 5338355 -80100125 - MIR SINE MIR -77 185 145 768 273 86 49 chr17 5338990 5339506 -80098974 + L2 LINE L2 2702 3231 -82 557 137 16 24 chr17 5339506 5339630 -80098850 + CT-rich Low_complexity Low_complexity 1 123 0 2194 92 0 0 chr17 5339630 5339922 -80098558 - AluSx SINE Alu -20 292 1 356 296 11 11 chr17 5339922 5340010 -80098470 + L2 LINE L2 3226 3313 0 220 295 30 60 chr17 5340211 5340377 -80098103 - L2 LINE L2 -464 2850 2690 645 105 0 0 chr17 5340380 5340466 -80098014 + AluSg/x SINE Alu 212 297 -12 2886 250 99 44 chr17 5340673 5341576 -80096904 + MER45C DNA AcHobo 2 953 0 730 226 0 0 chr17 5341959 5342096 -80096384 + FRAM SINE Alu 5 141 -35 914 111 0 16 chr17 5342115 5342358 -80096122 + (CA)n Simple_repeat Simple_repeat 1 239 0 394 336 52 42 chr17 5342861 5343111 -80095369 + MIR SINE MIR 3 253 -9 639 214 16 8 chr17 5343423 5343598 -80094882 + L1MA9 LINE L1 5874 6056 -244 264 203 72 0 chr17 5343812 5343881 -80094599 + MIR SINE MIR 49 122 -86 215 143 0 120 chr17 5343899 5344032 -80094448 + (CATA)n Simple_repeat Simple_repeat 3 119 0 313 370 66 9 chr17 5344044 5344255 -80094225 - MIR SINE MIR -9 253 31 1195 314 165 33 chr17 5344666 5345698 -80092782 + L2 LINE L2 959 2126 -1188 6443 208 44 66 chr17 5345740 5346070 -80092410 - L1M4 LINE L1 -1495 4651 4315 1769 155 3 7 chr17 5346070 5346373 -80092107 - AluJb SINE Alu -10 302 1 6443 208 44 66 chr17 5346373 5347646 -80090834 - L1M4 LINE L1 -1831 4315 3015 5164 138 26 20 chr17 5347646 5348550 -80089930 - L1MC1 LINE L1 0 6333 5424 6443 208 44 66 chr17 5348550 5348571 -80089909 - L1M4 LINE L1 -3131 3015 2995 1451 203 3 20 chr17 5348571 5348866 -80089614 - AluJo SINE Alu -22 290 1 6443 208 44 66 chr17 5348866 5349199 -80089281 - L1M4 LINE L1 -3151 2995 2736 1078 299 68 82 chr17 5349234 5350007 -80088473 + L2 LINE L2 2294 3051 -221 236 283 103 48 chr17 5350549 5350694 -80087786 + L2 LINE L2 3120 3272 -41 34 42 0 0 chr17 5350719 5350767 -80087713 + AT_rich Low_complexity Low_complexity 1 48 0 1493 178 7 4 chr17 5351531 5351806 -80086674 + AluJo SINE Alu 1 276 -36 351 0 0 0 chr17 5351809 5351848 -80086632 + (CA)n Simple_repeat Simple_repeat 1 39 0 21 0 0 0 chr17 5351975 5351996 -80086484 + AT_rich Low_complexity Low_complexity 1 21 0 359 316 15 7 chr17 5352461 5352597 -80085883 + L1ME4a LINE L1 5712 5848 -273 1852 121 4 4 chr17 5352607 5352880 -80085600 + AluSx SINE Alu 6 278 -34 192 40 0 0 chr17 5352880 5352905 -80085575 + (TCTCTG)n Simple_repeat Simple_repeat 4 28 0 423 0 0 0 chr17 5352907 5352954 -80085526 + (CA)n Simple_repeat Simple_repeat 2 48 0 1663 184 0 13 chr17 5352959 5353275 -80085205 + AluJb SINE Alu 1 312 0 1801 98 11 11 chr17 5353418 5353684 -80084796 - AluSq SINE Alu -15 298 33 333 115 0 0 chr17 5354135 5354196 -80084284 - AluJo SINE Alu -1 301 241 879 194 0 22 chr17 5354196 5354376 -80084104 - AluJo SINE Alu -136 176 1 430 276 104 27 chr17 5355032 5355253 -80083227 - MIR SINE MIR -12 250 13 443 231 56 0 chr17 5356368 5356476 -80082004 - MER81 DNA DNA 0 114 1 1958 95 14 11 chr17 5357220 5357504 -80080976 - AluSq SINE Alu -28 285 1 1843 152 0 7 chr17 5357583 5357886 -80080594 - AluSx SINE Alu -11 301 1 245 259 179 9 chr17 5358099 5358211 -80080269 + L2 LINE L2 3179 3309 -4 533 218 9 9 chr17 5360839 5360949 -80077531 - L2 LINE L2 -5 3308 3199 263 203 177 0 chr17 5360928 5361007 -80077473 + MIR SINE MIR 60 152 -56 * 554 277 100 4 chr17 5361223 5361454 -80077026 + LTR16C LTR ERVL 238 490 -1 2136 103 7 0 chr17 5361634 5361936 -80076544 - AluSq SINE Alu -9 304 1 2595 7 0 0 chr17 5362034 5362323 -80076157 - AluYb8 SINE Alu -29 289 1 340 281 16 16 chr17 5363153 5363274 -80075206 + L1PA12 LINE L1 2182 2302 -5279 5627 198 16 18 chr17 5363312 5364608 -80073872 + L1PA15 LINE L1 1231 2522 -4275 29 0 0 0 chr17 5364613 5364642 -80073838 + AT_rich Low_complexity Low_complexity 1 29 0 6818 126 23 2 chr17 5364642 5365315 -80073165 - L1MA1 LINE L1 -4 7717 7002 2364 83 0 0 chr17 5365315 5365617 -80072863 - AluY SINE Alu -9 302 1 6818 126 23 2 chr17 5365617 5366230 -80072250 - L1MA1 LINE L1 -719 7002 6403 * 12086 139 34 13 chr17 5366221 5369575 -80068905 - L1MA1 LINE L1 -2457 5108 1684 * 13221 220 84 12 chr17 5369574 5372789 -80065691 + L1PA15 LINE L1 2507 5984 -832 1826 136 31 3 chr17 5372789 5373083 -80065397 + AluSx SINE Alu 1 302 -10 13221 220 84 12 chr17 5373083 5373185 -80065295 + L1PA15 LINE L1 5984 6077 -739 42905 55 6 3 chr17 5373186 5375011 -80063469 + L1PA5 LINE L1 2 1820 -4334 2267 88 0 10 chr17 5375011 5375316 -80063164 - AluY SINE Alu -8 303 2 42905 55 6 3 chr17 5375316 5379623 -80058857 + L1PA5 LINE L1 1820 6152 -2 358 223 0 8 chr17 5379623 5379714 -80058766 + MLT2B1 LTR ERVL 132 220 -177 4017 134 41 61 chr17 5379714 5380305 -80058175 + L1PA15 LINE L1 6064 6638 -178 2134 103 0 6 chr17 5380305 5380616 -80057864 + AluY SINE Alu 1 309 -2 4017 134 41 61 chr17 5380616 5380779 -80057701 + L1PA15 LINE L1 6638 6803 -13 300 146 0 0 chr17 5381288 5381343 -80057137 - L1PA16 LINE L1 -6 6160 6106 377 333 133 36 chr17 5381614 5381839 -80056641 + MIR SINE MIR 9 255 -7 188 218 18 18 chr17 5381884 5381939 -80056541 - MIR3 SINE MIR -144 64 10 182 238 200 25 chr17 5383398 5383478 -80055002 + MIR SINE MIR 33 126 -82 219 69 0 0 chr17 5383533 5383562 -80054918 + (CAG)n Simple_repeat Simple_repeat 1 29 0 702 266 119 5 chr17 5383574 5383792 -80054688 - MIR SINE MIR -13 249 7 206 224 0 20 chr17 5385631 5385680 -80052800 + MIR SINE MIR 104 145 -63 1512 117 51 40 chr17 5385717 5385990 -80052490 - AluSx SINE Alu -36 276 1 1558 242 58 58 chr17 5386174 5386724 -80051756 - MER21B LTR ERV1 -75 788 239 857 245 40 20 chr17 5386727 5386976 -80051504 + L2 LINE L2 2531 2784 -530 839 155 0 8 chr17 5386983 5387112 -80051368 + FLAM_C SINE Alu 6 133 -10 1783 119 25 21 chr17 5387126 5387411 -80051069 + AluSq SINE Alu 1 286 -27 216 0 0 0 chr17 5387424 5387448 -80051032 + (CAA)n Simple_repeat Simple_repeat 2 25 0 834 280 217 18 chr17 5387460 5387895 -80050585 + L2 LINE L2 2776 3295 -18 1864 209 44 38 chr17 5388949 5389451 -80049029 - LTR10B LTR ERV1 0 505 1 202 194 0 0 chr17 5389594 5389630 -80048850 + CT-rich Low_complexity Low_complexity 3 38 0 835 215 81 48 chr17 5389975 5390157 -80048323 - L1MD3 LINE L1 0 8042 7857 1909 125 3 29 chr17 5390157 5390469 -80048011 - AluSx SINE Alu -8 304 1 835 215 81 48 chr17 5390469 5390596 -80047884 - L1MD3 LINE L1 -185 7857 7736 488 313 16 61 chr17 5390819 5391152 -80047328 - L1MC4a LINE L1 -330 5912 5591 386 283 72 81 chr17 5391289 5391655 -80046825 + L1M4 LINE L1 1239 3902 -2742 553 296 91 78 chr17 5391657 5392556 -80045924 + L1M4c LINE L1 819 3739 -2643 417 294 16 16 chr17 5393170 5393296 -80045184 - FLAM_A SINE Alu -6 127 2 374 87 5 103 chr17 5393488 5393683 -80044797 + (TGGGGG)n Simple_repeat Simple_repeat 2 177 0 * 436 33 50 83 chr17 5393644 5393825 -80044655 + (GTGTG)n Simple_repeat Simple_repeat 4 178 0 357 96 60 42 chr17 5393850 5394017 -80044463 + (GGGTG)n Simple_repeat Simple_repeat 5 174 0 567 98 12 49 chr17 5394080 5394243 -80044237 + (TGGG)n Simple_repeat Simple_repeat 1 157 0 375 239 0 0 chr17 5394247 5394364 -80044116 + G-rich Low_complexity Low_complexity 1 117 0 2165 265 37 23 chr17 5394783 5395640 -80042840 - L1M4 LINE L1 -2147 3999 3131 1221 160 113 47 chr17 5397357 5397701 -80040779 + L1MB3 LINE L1 5816 6182 -1 284 275 75 6 chr17 5397949 5398109 -80040371 + L1ME LINE L1 5274 5444 -677 2050 122 3 0 chr17 5398113 5398417 -80040063 + AluSx SINE Alu 7 311 -1 1395 203 52 41 chr17 5398713 5399102 -80039378 + L1ME2 LINE L1 5755 6144 -20 1513 184 122 6 chr17 5399327 5399663 -80038817 + L1MC4 LINE L1 6529 6903 -1139 21 0 0 0 chr17 5399667 5399688 -80038792 + AT_rich Low_complexity Low_complexity 1 21 0 1361 177 3 46 chr17 5399691 5399974 -80038506 + AluJo SINE Alu 5 275 -37 497 272 181 33 chr17 5400037 5400362 -80038118 + L1ME LINE L1 5430 5804 -317 1396 194 0 11 chr17 5400435 5400708 -80037772 - AluJb SINE Alu -21 291 22 251 143 0 24 chr17 5400713 5400755 -80037725 - FAM SINE Alu -35 144 104 * 297 145 84 72 chr17 5400741 5400824 -80037656 - FAM SINE Alu -31 144 61 424 113 0 0 chr17 5401065 5401136 -80037344 + Alu SINE Alu 241 311 -1 209 301 243 10 chr17 5401159 5401262 -80037218 - MIR3 SINE MIR -78 130 4 2075 116 3 0 chr17 5403254 5403555 -80034925 - AluSx SINE Alu -10 302 1 21 57 0 0 chr17 5404937 5404972 -80033508 + AT_rich Low_complexity Low_complexity 1 35 0 719 140 18 0 chr17 5404972 5405086 -80033394 - FLAM_C SINE Alu -26 117 2 230 317 39 29 chr17 5405679 5405783 -80032697 - L2 LINE L2 -240 3032 2928 2094 109 0 3 chr17 5405863 5406156 -80032324 - AluSq SINE Alu -21 292 1 390 313 50 56 chr17 5406439 5406618 -80031862 - MER5B DNA MER1_type 0 178 1 23 0 0 0 chr17 5407831 5407854 -80030626 + GC_rich Low_complexity Low_complexity 1 23 0 687 181 0 0 chr17 5408740 5408845 -80029635 + AluSg/x SINE Alu 146 250 -62 1216 159 0 26 chr17 5408845 5409077 -80029403 + AluJb SINE Alu 85 310 -2 2025 135 3 0 chr17 5409141 5409444 -80029036 - AluSx SINE Alu -8 304 1 959 266 54 43 chr17 5409444 5409793 -80028687 - MER67C LTR ERV1 -201 509 157 272 321 199 36 chr17 5409819 5410180 -80028300 - L2 LINE L2 -2231 1083 664 1079 172 35 25 chr17 5411487 5411690 -80026790 - AluJo SINE Alu -22 290 86 750 234 177 54 chr17 5412547 5412785 -80025695 + MLT1D LTR MaLR 1 258 -132 2256 86 3 3 chr17 5412785 5413086 -80025394 + AluSx SINE Alu 1 301 -11 750 234 177 54 chr17 5413086 5413238 -80025242 + MLT1D LTR MaLR 258 390 0 1929 125 10 7 chr17 5413866 5414170 -80024310 + AluSx SINE Alu 1 305 -7 854 173 0 37 chr17 5414170 5414320 -80024160 + AluSg/x SINE Alu 134 288 -24 279 0 0 0 chr17 5414320 5414351 -80024129 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1741 160 0 10 chr17 5414351 5414651 -80023829 + AluJb SINE Alu 2 298 -14 2362 211 49 42 chr17 5414665 5415235 -80023245 + L1M4 LINE L1 3750 4327 -1819 1708 168 0 7 chr17 5415235 5415532 -80022948 - AluJo SINE Alu -17 295 1 2362 211 49 42 chr17 5415532 5415654 -80022826 + L1M4 LINE L1 4327 4447 -1699 261 108 0 0 chr17 5415657 5415694 -80022786 - THE1B LTR MaLR 0 364 328 1109 194 0 0 chr17 5415694 5415911 -80022569 + L1M4 LINE L1 4591 4807 -1339 806 144 0 0 chr17 5415923 5416041 -80022439 + AluSq/x SINE Alu 1 118 -194 1151 123 0 0 chr17 5416077 5416247 -80022233 - AluSg/x SINE Alu -12 300 131 806 133 7 7 chr17 5416259 5416394 -80022086 - AluYa5 SINE Alu -30 281 147 881 151 0 7 chr17 5416900 5417073 -80021407 - AluJb SINE Alu 0 311 140 2132 102 7 3 chr17 5417086 5417389 -80021091 - AluSx SINE Alu -8 304 1 297 252 26 52 chr17 5417723 5417838 -80020642 - L1ME LINE L1 -309 5855 5744 2037 120 3 0 chr17 5418242 5418534 -80019946 + AluSx SINE Alu 1 293 -19 306 276 62 53 chr17 5419501 5419744 -80018736 - L1MEd LINE L1 -4894 1225 981 310 303 80 55 chr17 5419834 5420072 -80018408 - HAL1 LINE L1 -1410 1097 854 2150 112 0 0 chr17 5420776 5421070 -80017410 + AluSx SINE Alu 1 294 -18 347 287 19 9 chr17 5421106 5421214 -80017266 + MIR SINE MIR 154 262 0 3793 115 32 2 chr17 5421253 5421808 -80016672 + LTR26 LTR ERV1 1 572 -31 387 314 51 22 chr17 5422052 5422189 -80016291 + MIR SINE MIR 51 191 -71 268 291 0 78 chr17 5423523 5423664 -80014816 - LTR16C LTR ERVL -15 476 347 2103 207 27 56 chr17 5423881 5424399 -80014081 + MLT1D LTR MaLR 1 503 -2 384 283 123 65 chr17 5424751 5424872 -80013608 - L2 LINE L2 -15 3298 3186 2233 98 0 0 chr17 5424872 5425168 -80013312 + AluSx SINE Alu 1 296 -16 384 283 123 65 chr17 5425168 5425371 -80013109 - L2 LINE L2 -127 3186 2955 328 307 45 61 chr17 5425671 5425866 -80012614 + MIR SINE MIR 7 198 -61 429 20 0 0 chr17 5426035 5426085 -80012395 + (GA)n Simple_repeat Simple_repeat 1 50 0 387 228 10 10 chr17 5426386 5426487 -80011993 - L1MD2 LINE L1 -3 6356 6256 2291 80 0 3 chr17 5427108 5427409 -80011071 + AluY SINE Alu 1 300 -11 367 269 56 9 chr17 5428067 5428175 -80010305 - MIR SINE MIR -111 151 39 399 291 0 47 chr17 5428446 5428573 -80009907 + MIR3 SINE MIR 10 130 -78 290 248 8 66 chr17 5428583 5428704 -80009776 + MIR SINE MIR 92 205 -57 804 100 0 0 chr17 5429579 5429699 -80008781 + (TTCTC)n Simple_repeat Simple_repeat 4 123 0 2205 81 0 0 chr17 5429699 5429984 -80008496 - AluSq SINE Alu -28 285 1 514 231 84 30 chr17 5430211 5430366 -80008114 - MIR SINE MIR -63 145 7 739 167 8 23 chr17 5431008 5431140 -80007340 - FLAM_C SINE Alu 0 133 4 1982 134 0 3 chr17 5431149 5431447 -80007033 - AluSx SINE Alu -15 297 1 2028 110 23 3 chr17 5431455 5431754 -80006726 - AluSx SINE Alu -7 305 1 310 289 11 11 chr17 5431864 5431954 -80006526 - MIR3 SINE MIR -27 181 92 554 296 47 28 chr17 5432375 5432588 -80005892 - MIR SINE MIR -37 225 9 1378 172 97 0 chr17 5433760 5434028 -80004452 + MLT1D LTR MaLR 1 294 -211 355 305 31 23 chr17 5484087 5484215 -79954265 - L2 LINE L2 -6 3307 3179 312 283 7 3 chr17 5484452 5484590 -79953890 + MIR SINE MIR 48 226 -36 358 305 52 55 chr17 5485215 5485559 -79952921 - L2 LINE L2 -94 3178 2836 287 304 29 0 chr17 5485632 5485734 -79952746 + MIR SINE MIR 36 140 -68 702 285 170 16 chr17 5485766 5486078 -79952402 - L2 LINE L2 0 3313 2954 391 259 61 27 chr17 5486092 5486239 -79952241 - MIR SINE MIR -27 235 84 258 105 0 0 chr17 5486470 5486508 -79951972 + (TCTCCC)n Simple_repeat Simple_repeat 2 39 0 1984 134 25 0 chr17 5486508 5486792 -79951688 - AluJo SINE Alu -21 291 1 353 288 34 68 chr17 5486904 5487050 -79951430 - L1ME4a LINE L1 -14 6107 5967 343 131 321 36 chr17 5487160 5487244 -79951236 + AluJb SINE Alu 1 108 -194 188 264 94 0 chr17 5487653 5487706 -79950774 - MIR SINE MIR -99 163 106 752 261 61 8 chr17 5488798 5489043 -79949437 - MIR SINE MIR 0 262 5 1891 127 22 120 chr17 5489081 5489497 -79948983 + THE1C LTR MaLR 1 375 0 222 281 101 96 chr17 5490556 5490734 -79947746 + L3 LINE CR1 274 452 -1125 230 283 81 40 chr17 5490761 5490860 -79947620 - MIR SINE MIR -82 180 78 402 305 168 20 chr17 5490931 5491223 -79947257 + L3 LINE CR1 427 761 -816 199 188 0 0 chr17 5491268 5491300 -79947180 + MIR SINE MIR 76 107 -155 556 290 53 0 chr17 5491424 5491593 -79946887 + MIR SINE MIR 6 183 -79 691 306 107 31 chr17 5491746 5491858 -79946622 + L2 LINE L2 2722 2824 -489 5129 74 8 46 chr17 5491858 5492576 -79945904 + LTR8 LTR ERV1 1 691 0 691 306 107 31 chr17 5492576 5493015 -79945465 + L2 LINE L2 2824 3313 0 291 243 36 45 chr17 5494833 5494944 -79943536 - MIR SINE MIR -127 135 26 517 249 68 39 chr17 5495450 5495888 -79942592 + L1ME4a LINE L1 5562 6041 -80 1085 216 98 53 chr17 5496072 5496451 -79942029 + MSTD LTR MaLR 1 396 0 325 253 0 13 chr17 5497251 5497330 -79941150 + Charlie8 DNA MER1_type 1347 1424 -993 363 261 0 63 chr17 5497804 5497915 -79940565 - MIR SINE MIR -88 120 17 581 237 72 20 chr17 5498267 5498419 -79940061 + MIR SINE MIR 28 187 -75 223 122 122 0 chr17 5498547 5498588 -79939892 + MIR SINE MIR 176 221 -41 2069 105 0 3 chr17 5500738 5501024 -79937456 + AluSx SINE Alu 21 305 -7 217 349 28 28 chr17 5501201 5501310 -79937170 + MIR SINE MIR 37 145 -117 333 277 109 25 chr17 5501665 5501784 -79936696 + MLT1I LTR MaLR 18 146 -263 369 211 58 19 chr17 5501943 5502047 -79936433 + MLT1G LTR MaLR 483 590 0 518 261 187 13 chr17 5502086 5502252 -79936228 - L1MC4a LINE L1 -552 5569 5622 1366 129 35 22 chr17 5502252 5502484 -79935996 - MER46A DNA MER2_type -1 235 1 518 261 187 13 chr17 5502484 5502627 -79935853 - L1MC4a LINE L1 -498 5623 5506 1010 243 72 40 chr17 5502729 5503005 -79935475 - MER113 DNA MER1_type? 0 521 227 1504 142 32 21 chr17 5503005 5503287 -79935193 - L1MA8 LINE L1 -1 6290 6006 1010 243 72 40 chr17 5503287 5503410 -79935070 - MER113 DNA MER1_type? -294 227 109 1940 210 83 19 chr17 5503431 5503685 -79934795 - L1MC4a LINE L1 0 7808 7572 2191 106 143 13 chr17 5503685 5504064 -79934416 + MSTA LTR MaLR 1 428 0 1940 210 83 19 chr17 5504064 5504276 -79934204 - L1MC4a LINE L1 -236 7572 7312 359 266 0 21 chr17 5505340 5505434 -79933046 - L2 LINE L2 -34 3279 3188 381 117 17 0 chr17 5505853 5505913 -79932567 - MSTB LTR MaLR 0 432 372 1261 112 32 5 chr17 5505913 5506101 -79932379 + AluSq SINE Alu 99 291 -22 1884 188 42 6 chr17 5506101 5506462 -79932018 - MSTB LTR MaLR -52 374 1 383 312 30 21 chr17 5506731 5506994 -79931486 + MLT1J2 LTR MaLR 109 435 -15 241 176 20 0 chr17 5507263 5507314 -79931166 - MIR SINE MIR -64 198 147 1068 204 0 18 chr17 5507314 5507539 -79930941 - AluJo SINE Alu -5 307 87 297 0 0 0 chr17 5507543 5507576 -79930904 + (TC)n Simple_repeat Simple_repeat 2 34 0 403 245 189 0 chr17 5507576 5507682 -79930798 - MIR SINE MIR -123 139 14 1054 266 98 77 chr17 5508407 5508771 -79929709 - MLT1G3 LTR MaLR -17 513 177 2143 110 0 0 chr17 5508771 5509079 -79929401 + AluSq SINE Alu 1 308 -5 1054 266 98 77 chr17 5509079 5509260 -79929220 - MLT1G3 LTR MaLR -353 177 1 298 261 31 39 chr17 5509359 5509489 -79928991 - LTR67 LTR ERVL 0 557 429 790 283 11 0 chr17 5509636 5509827 -79928653 + MIR SINE MIR 65 257 -5 2016 117 3 0 chr17 5509888 5510170 -79928310 - AluSx SINE Alu -25 287 5 212 281 101 34 chr17 5510176 5510265 -79928215 + L2 LINE L2 3177 3271 -1 2108 100 37 7 chr17 5510330 5510630 -79927850 - AluSp SINE Alu -4 309 1 1845 120 33 10 chr17 5510723 5510744 -79927736 - AluSq SINE Alu -6 307 288 1007 111 11 17 chr17 5510744 5510925 -79927555 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 1845 120 33 10 chr17 5510925 5511203 -79927277 - AluSq SINE Alu -25 288 1 221 322 161 71 chr17 5512741 5512996 -79925484 - L2 LINE L2 0 3272 2995 2101 96 28 0 chr17 5513010 5513301 -79925179 + AluSc SINE Alu 1 299 -10 806 304 23 5 chr17 5513312 5513532 -79924948 - MIR SINE MIR -2 260 37 647 317 44 26 chr17 5513730 5513957 -79924523 - MIR SINE MIR -12 250 20 195 45 0 68 chr17 5513957 5514001 -79924479 + (TTTTC)n Simple_repeat Simple_repeat 4 44 0 2259 99 0 6 chr17 5514003 5514316 -79924164 - AluSq SINE Alu 0 313 3 5273 42 12 9 chr17 5514340 5515442 -79923038 - SVA Other Other -954 1386 5 224 0 0 111 chr17 5515446 5515509 -79922971 + (GGGAGA)n Simple_repeat Simple_repeat 6 61 0 240 321 238 14 chr17 5515720 5516162 -79922318 + L2 LINE L2 2155 2695 -619 491 243 52 64 chr17 5516199 5516372 -79922108 + MIR SINE MIR 84 254 -8 268 328 134 0 chr17 5516392 5516511 -79921969 + L2 LINE L2 2713 2847 -467 307 158 0 0 chr17 5516582 5516639 -79921841 - L1MA8 LINE L1 -26 6265 6209 6304 235 81 30 chr17 5516679 5516714 -79921766 + L1MEc LINE L1 234 266 -5949 1514 186 53 42 chr17 5516714 5517075 -79921405 - MLT1A1 LTR MaLR 0 365 1 6304 235 81 30 chr17 5517075 5519447 -79919033 + L1MEc LINE L1 266 2720 -3495 9003 93 14 9 chr17 5519460 5520673 -79917807 + HSMAR1 DNA Mariner 5 1223 -64 7281 156 9 13 chr17 5520673 5520715 -79917765 + L1PB1 LINE L1 3796 3837 -2314 2911 88 6 135 chr17 5520715 5521235 -79917245 + MLT2A2 LTR ERVL 1 453 0 7281 156 9 13 chr17 5521235 5523553 -79914927 + L1PB1 LINE L1 3837 6150 -1 580 89 0 0 chr17 5523560 5523639 -79914841 + HSMAR1 DNA Mariner 1208 1286 -1 2119 98 0 55 chr17 5525306 5525633 -79912847 + AluSg SINE Alu 1 309 -1 219 280 0 0 chr17 5526154 5526204 -79912276 + CT-rich Low_complexity Low_complexity 3 52 0 2238 95 0 3 chr17 5527571 5527877 -79910603 + AluY SINE Alu 4 308 -3 2827 75 5 3 chr17 5528322 5528698 -79909782 + L1PA8 LINE L1 5796 6172 0 2377 167 50 27 chr17 5528739 5529224 -79909256 + L1MB3 LINE L1 5688 6183 0 410 321 99 9 chr17 5529235 5529447 -79909033 + L1MEd LINE L1 1210 1440 -4976 622 251 167 35 chr17 5529487 5529798 -79908682 - MLT1J LTR MaLR -43 468 117 232 208 0 19 chr17 5529823 5529876 -79908604 - MLT1L LTR MaLR -543 72 21 389 256 55 97 chr17 5529912 5530149 -79908331 + HAL1 LINE L1 1254 1466 -1041 2447 84 0 0 chr17 5530149 5530459 -79908021 + AluSx SINE Alu 1 310 -2 389 256 55 97 chr17 5530459 5530655 -79907825 + HAL1 LINE L1 1466 1669 -838 1558 221 42 32 chr17 5530830 5531008 -79907472 - L1M4 LINE L1 -824 5322 5147 2337 56 0 37 chr17 5531008 5531329 -79907151 - AluY SINE Alu -2 309 1 1558 221 42 32 chr17 5531329 5531584 -79906896 - L1M4 LINE L1 -999 5147 4885 213 313 0 0 chr17 5531933 5532000 -79906480 + T-rich Low_complexity Low_complexity 1 67 0 2230 101 0 0 chr17 5532241 5532539 -79905941 + AluSx SINE Alu 1 298 -14 834 154 7 13 chr17 5532674 5532823 -79905657 + AluJo SINE Alu 88 235 -77 771 274 89 78 chr17 5532835 5533187 -79905293 + L1MEd LINE L1 2223 2571 -3855 1902 131 0 39 chr17 5533187 5533499 -79904981 + AluSg SINE Alu 3 302 -8 771 274 89 78 chr17 5533499 5533742 -79904738 + L1MEd LINE L1 2571 2810 -3616 233 270 63 46 chr17 5534122 5534296 -79904184 + L1MEd LINE L1 3153 3329 -3097 454 322 7 20 chr17 5534534 5534683 -79903797 + MER5B DNA MER1_type 1 147 -31 471 293 104 30 chr17 5534700 5535257 -79903223 + L1M4 LINE L1 4131 4752 -1394 2107 150 3 15 chr17 5535257 5535598 -79902882 - MER1B DNA MER1_type 0 337 1 471 293 104 30 chr17 5535598 5535742 -79902738 + L1M4 LINE L1 4752 4884 -1262 784 268 91 78 chr17 5535762 5536259 -79902221 - MLT1J LTR MaLR 0 511 9 594 126 84 8 chr17 5536570 5536689 -79901791 + MER53 DNA DNA 1 128 -61 447 19 0 0 chr17 5536692 5536744 -79901736 + (CATA)n Simple_repeat Simple_repeat 3 54 0 6246 56 13 0 chr17 5537468 5538238 -79900242 - L1PA8A LINE L1 -28 6103 5324 189 333 0 18 chr17 5538242 5538299 -79900181 - MIR SINE MIR -133 75 20 2064 140 13 3 chr17 5539492 5539799 -79898681 - AluSg SINE Alu 0 310 1 379 244 81 81 chr17 5540184 5540231 -79898249 + L2 LINE L2 3117 3163 -150 2133 112 3 7 chr17 5540231 5540541 -79897939 - AluSx SINE Alu 0 309 1 379 244 81 81 chr17 5540541 5540689 -79897791 + L2 LINE L2 3162 3313 0 677 318 39 33 chr17 5540755 5541092 -79897388 - MLT1I LTR MaLR 0 409 71 616 147 104 61 chr17 5541354 5541373 -79897107 + MER21A LTR ERV1 6 23 -908 365 0 22 0 chr17 5541373 5541418 -79897062 + (TAGA)n Simple_repeat Simple_repeat 4 49 0 616 147 104 61 chr17 5541418 5541561 -79896919 + MER21A LTR ERV1 23 175 -756 * 2070 161 116 9 chr17 5541550 5541990 -79896490 + MER21B LTR ERV1 377 863 0 2004 106 0 15 chr17 5542251 5542524 -79895956 - AluSx SINE Alu -43 269 1 2243 110 3 49 chr17 5542861 5543188 -79895292 + AluSx SINE Alu 1 312 0 1328 171 38 46 chr17 5543581 5543844 -79894636 - AluJo SINE Alu -10 302 42 386 338 30 0 chr17 5544410 5544543 -79893937 - L3 LINE CR1 -1 1576 1440 535 314 12 17 chr17 5544566 5544738 -79893742 + MIR SINE MIR 90 260 -2 1345 104 6 0 chr17 5544856 5545029 -79893451 - AluSp SINE Alu -8 305 132 2478 96 0 0 chr17 5545029 5545341 -79893139 - AluSx SINE Alu 0 312 1 22 70 0 0 chr17 5545957 5546000 -79892480 + AT_rich Low_complexity Low_complexity 1 43 0 2327 80 0 48 chr17 5546337 5546651 -79891829 - AluSx SINE Alu -13 299 1 337 284 7 47 chr17 5546651 5546788 -79891692 + CT-rich Low_complexity Low_complexity 13 145 0 185 260 13 0 chr17 5546958 5547035 -79891445 + C-rich Low_complexity Low_complexity 4 81 0 290 274 32 19 chr17 5547045 5547202 -79891278 + (TCTCTG)n Simple_repeat Simple_repeat 3 161 0 180 111 0 0 chr17 5547213 5547240 -79891240 + (TCTCTG)n Simple_repeat Simple_repeat 2 28 0 3117 219 60 34 chr17 5548535 5549192 -79889288 - L1MD1 LINE L1 0 7808 7170 2182 114 3 0 chr17 5549192 5549490 -79888990 - AluSx SINE Alu -13 299 1 3117 219 60 34 chr17 5549490 5549706 -79888774 - L1MD1 LINE L1 -638 7170 6079 318 50 0 0 chr17 5549732 5549772 -79888708 + (TA)n Simple_repeat Simple_repeat 1 40 0 467 259 121 30 chr17 5550223 5550455 -79888025 + MLT1K LTR MaLR 329 581 -7 400 250 125 60 chr17 5550607 5550775 -79887705 + MIR SINE MIR 28 206 -56 1069 210 0 14 chr17 5551399 5551618 -79886862 - MER20 DNA MER1_type 0 219 4 609 266 27 23 chr17 5551623 5551812 -79886668 + MIR SINE MIR 1 197 -63 476 186 29 10 chr17 5551866 5551968 -79886512 + L2 LINE L2 3151 3254 -18 2545 77 3 0 chr17 5552578 5552889 -79885591 + AluSx SINE Alu 1 312 0 710 174 45 50 chr17 5553447 5553648 -79884832 + LTR45 LTR ERV1 326 525 0 331 346 78 7 chr17 5553798 5553951 -79884529 + L2 LINE L2 2562 2725 -589 365 314 129 16 chr17 5553974 5554292 -79884188 + L1ME4a LINE L1 5697 6050 -71 2287 95 7 3 chr17 5554443 5554737 -79883743 - AluSg SINE Alu -15 295 1 970 221 101 4 chr17 5554779 5555055 -79883425 - LTR16C LTR ERVL 0 491 189 2173 96 34 10 chr17 5555190 5555483 -79882997 + AluSx SINE Alu 1 300 -12 213 303 81 0 chr17 5555503 5555602 -79882878 + MIR SINE MIR 86 192 -70 324 0 0 0 chr17 5555606 5555642 -79882838 + (TG)n Simple_repeat Simple_repeat 2 37 0 379 141 13 51 chr17 5555644 5555722 -79882758 + MLT1A2 LTR MaLR 4 78 -296 1064 170 5 25 chr17 5555739 5555939 -79882541 + MLT1A2 LTR MaLR 179 374 0 699 186 9 0 chr17 5556385 5556498 -79881982 - MER81 DNA DNA 0 114 1 546 273 142 24 chr17 5558201 5558490 -79879990 + MLT1K LTR MaLR 17 339 -249 2067 127 0 3 chr17 5558949 5559264 -79879216 - AluSg SINE Alu 0 314 1 264 291 22 15 chr17 5560182 5560316 -79878164 + (TGGA)n Simple_repeat Simple_repeat 1 135 0 2323 96 3 0 chr17 5561487 5561779 -79876701 - AluSc SINE Alu -16 293 1 901 219 29 15 chr17 5561794 5561825 -79876655 - L1MA1 LINE L1 -380 5800 5771 1774 202 16 26 chr17 5561825 5562202 -79876278 - L1MB5 LINE L1 -8 6166 5794 4883 33 0 3 chr17 5562203 5562779 -79875701 + L1PA8 LINE L1 5594 6167 -5 901 219 29 15 chr17 5562779 5562995 -79875485 - L1MA1 LINE L1 -408 5772 5582 401 342 58 52 chr17 5562998 5563346 -79875134 + L2 LINE L2 2879 3228 -44 220 218 23 0 chr17 5563854 5563941 -79874539 + GA-rich Low_complexity Low_complexity 1 89 0 261 277 26 26 chr17 5564047 5564202 -79874278 + (CAGAGA)n Simple_repeat Simple_repeat 6 160 0 466 283 50 13 chr17 5564326 5564485 -79873995 - MIR SINE MIR -81 181 17 5996 146 105 89 chr17 5564559 5566228 -79872252 + pTR5 LTR ERV1 743 2438 0 2163 99 0 55 chr17 5566700 5567012 -79871468 + AluSc SINE Alu 6 300 -9 419 185 260 27 chr17 5567098 5567244 -79871236 + L2 LINE L2 3134 3313 0 205 319 104 0 chr17 5567375 5567510 -79870970 - L2 LINE L2 -560 2754 2606 361 133 0 80 chr17 5568067 5568180 -79870300 + (CCCCCA)n Simple_repeat Simple_repeat 2 105 0 347 310 161 35 chr17 5568609 5568957 -79869523 + L2 LINE L2 2873 3264 -8 252 246 35 70 chr17 5568971 5569085 -79869395 + MIR SINE MIR 29 138 -70 1017 259 17 4 chr17 5569160 5569399 -79869081 - MIR SINE MIR -10 252 11 626 246 191 5 chr17 5569422 5569621 -79868859 - MIR SINE MIR -7 255 20 252 402 0 9 chr17 5569639 5569746 -79868734 - MIR3 SINE MIR -54 154 49 629 253 69 35 chr17 5569885 5570207 -79868273 - MLT1H LTR MaLR -235 336 14 2371 94 7 0 chr17 5570217 5570516 -79867964 + AluSx SINE Alu 1 301 -11 2137 150 36 85 chr17 5571334 5571922 -79866558 + L1MB3 LINE L1 5625 6183 0 2402 98 0 3 chr17 5572619 5572924 -79865556 + AluSq SINE Alu 2 305 -8 182 333 65 36 chr17 5573251 5573352 -79865128 - MIR SINE MIR -23 239 131 2130 119 0 13 chr17 5573352 5573655 -79864825 + AluSx SINE Alu 1 299 -13 182 333 65 36 chr17 5573655 5573691 -79864789 - MIR SINE MIR -131 131 98 264 323 58 35 chr17 5573776 5574002 -79864478 - L2 LINE L2 -533 2781 2551 260 213 38 12 chr17 5574447 5574527 -79863953 + GA-rich Low_complexity Low_complexity 3 84 0 204 294 0 74 chr17 5575187 5575350 -79863130 + G-rich Low_complexity Low_complexity 12 162 0 344 333 108 5 chr17 5575554 5575740 -79862740 - MIR SINE MIR 0 262 58 2223 95 4 0 chr17 5575970 5576243 -79862237 - AluSx SINE Alu -38 274 1 796 191 114 64 chr17 5576516 5576736 -79861744 - MLT1D LTR MaLR 0 505 275 2556 206 36 10 chr17 5576819 5577405 -79861075 - MLT1H-int LTR MaLR -770 601 1 1736 217 2 42 chr17 5577407 5577817 -79860663 - MLT2C1 LTR ERVL -2 395 2 293 194 108 21 chr17 5578057 5578150 -79860330 - MLT1H LTR MaLR -13 536 436 439 282 161 10 chr17 5580525 5580802 -79857678 + MIR SINE MIR 4 252 -10 198 103 0 0 chr17 5580812 5580841 -79857639 + (CAT)n Simple_repeat Simple_repeat 2 30 0 31 44 0 0 chr17 5581032 5581077 -79857403 + AT_rich Low_complexity Low_complexity 1 45 0 185 284 123 25 chr17 5581118 5581199 -79857281 - MIR3 SINE MIR -33 175 87 1683 162 65 0 chr17 5581254 5581413 -79857067 - AluJo SINE Alu -11 301 154 194 88 0 29 chr17 5581413 5581447 -79857033 + (TTA)n Simple_repeat Simple_repeat 1 33 0 1683 162 65 0 chr17 5581447 5581565 -79856915 - AluJo SINE Alu -158 154 6 551 318 90 0 chr17 5581834 5582067 -79856413 - MIR SINE MIR -8 254 1 243 218 35 103 chr17 5582195 5582270 -79856210 + L2 LINE L2 3229 3299 -14 186 103 0 0 chr17 5582270 5582299 -79856181 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 243 218 35 103 chr17 5582299 5582310 -79856170 + L2 LINE L2 3299 3309 -4 2356 92 0 13 chr17 5582394 5582700 -79855780 + AluSx SINE Alu 1 302 -10 182 262 0 49 chr17 5582797 5582858 -79855622 - L2 LINE L2 -531 2783 2726 447 220 148 99 chr17 5584071 5584416 -79854064 + LTR33 LTR ERVL 2 363 -158 1102 285 103 14 chr17 5586226 5586664 -79851816 - L2 LINE L2 -8 3305 2829 219 250 88 15 chr17 5586897 5586965 -79851515 - L2 LINE L2 -23 3249 3177 291 315 33 0 chr17 5587329 5587421 -79851059 - MIR SINE MIR -78 184 90 546 279 85 5 chr17 5587425 5587626 -79850854 + LTR50 LTR ERVL 3 219 -576 406 295 179 0 chr17 5588674 5588847 -79849633 + MIR SINE MIR 58 261 -1 294 296 208 0 chr17 5588972 5589097 -79849383 + MIR SINE MIR 110 260 -2 934 356 59 41 chr17 5589161 5589741 -79848739 - L3 LINE CR1 -194 1383 788 2184 120 30 0 chr17 5589741 5590041 -79848439 - AluSx SINE Alu -3 309 1 934 356 59 41 chr17 5590041 5590125 -79848355 - L3 LINE CR1 -789 788 707 267 280 40 64 chr17 5590142 5590267 -79848213 - MIR SINE MIR -57 151 30 293 281 0 158 chr17 5590269 5590370 -79848110 - L3 LINE CR1 -4 1573 1536 1726 172 33 0 chr17 5590370 5590672 -79847808 - AluJo SINE Alu 0 312 1 293 281 0 158 chr17 5590672 5590830 -79847650 - L3 LINE CR1 -41 1536 1355 826 233 31 54 chr17 5591429 5591652 -79846828 + MER20 DNA MER1_type 2 219 0 630 222 50 61 chr17 5592337 5592535 -79845945 + MER63A DNA MER1_type 1 196 -14 553 190 12 104 chr17 5593467 5593630 -79844850 - MER58C DNA MER1_type -1 214 67 24 0 0 0 chr17 5594602 5594626 -79843854 + AT_rich Low_complexity Low_complexity 1 24 0 297 0 0 0 chr17 5594626 5594659 -79843821 + (TTA)n Simple_repeat Simple_repeat 2 34 0 1979 99 7 7 chr17 5594662 5594944 -79843536 - AluSx SINE Alu -30 282 1 264 349 23 0 chr17 5595876 5595962 -79842518 + L2 LINE L2 2686 2773 -541 479 167 9 0 chr17 5596021 5596135 -79842345 + (CA)n Simple_repeat Simple_repeat 1 115 0 408 232 80 115 chr17 5596483 5596948 -79841532 + L1MC4a LINE L1 5601 5824 -297 1821 174 32 32 chr17 5596972 5597414 -79841066 - L1MDa LINE L1 -4870 1670 1229 1076 160 26 90 chr17 5597427 5597695 -79840785 - L1MB8 LINE L1 -1 6177 5927 793 206 9 72 chr17 5597689 5597794 -79840686 - L1MDa LINE L1 -5306 1234 1149 * 2416 175 38 9 chr17 5597794 5598246 -79840234 - MLT1C LTR MaLR 0 467 3 793 206 9 72 chr17 5598246 5598363 -79840117 - L1MDa LINE L1 -5391 1149 1026 1509 181 199 6 chr17 5598363 5598530 -79839950 - MSTD LTR MaLR 0 396 263 186 43 0 0 chr17 5598530 5598553 -79839927 + (GA)n Simple_repeat Simple_repeat 2 24 0 1509 181 199 6 chr17 5598553 5598716 -79839764 - MSTD LTR MaLR -133 263 2 2258 229 262 21 chr17 5598716 5599529 -79838951 - L1MDa LINE L1 -5509 1031 23 440 308 21 12 chr17 5599560 5599751 -79838729 - L1 LINE L1 -2281 3865 3668 219 114 0 0 chr17 5600022 5600057 -79838423 + (T)n Simple_repeat Simple_repeat 1 35 0 578 320 119 50 chr17 5600188 5600826 -79837654 - L1 LINE L1 -2764 3382 2701 221 240 0 0 chr17 5601113 5601163 -79837317 + GA-rich Low_complexity Low_complexity 2 51 0 1753 120 0 0 chr17 5601386 5601636 -79836844 - AluSc SINE Alu -5 304 55 947 264 28 0 chr17 5602124 5602336 -79836144 + MIR SINE MIR 45 262 0 1567 169 196 88 chr17 5602816 5603347 -79835133 + LTR4 LTR ERV1 1 588 0 2086 259 87 32 chr17 5603802 5604185 -79834295 - HAL1 LINE L1 0 2507 2146 2010 154 3 0 chr17 5604185 5604491 -79833989 - AluSx SINE Alu -5 307 1 2086 259 87 32 chr17 5604491 5605004 -79833476 - HAL1 LINE L1 -361 2146 1562 1860 257 174 38 chr17 5605000 5605288 -79833192 - HAL1 LINE L1 -1165 1342 1095 * 2059 119 3 3 chr17 5605288 5605581 -79832899 - AluSc SINE Alu -16 293 1 1860 257 174 38 chr17 5605581 5605612 -79832868 - HAL1 LINE L1 -1412 1095 1070 3510 108 61 34 chr17 5605612 5605915 -79832565 + MER4B LTR ERV1 1 294 -316 2289 95 0 0 chr17 5605915 5606219 -79832261 - AluY SINE Alu -7 304 1 3510 108 61 34 chr17 5606219 5606509 -79831971 + MER4B LTR ERV1 294 610 0 1860 257 174 38 chr17 5606509 5607362 -79831118 - HAL1 LINE L1 -1437 1070 9 587 256 103 91 chr17 5607362 5607431 -79831049 - L1ME4a LINE L1 -3 6118 6051 2104 112 0 0 chr17 5607431 5607718 -79830762 + AluSx SINE Alu 26 312 0 587 256 103 91 chr17 5607718 5607934 -79830546 - L1ME4a LINE L1 -70 6051 5824 2284 82 3 0 chr17 5607934 5608228 -79830252 + AluSp SINE Alu 1 295 -18 587 256 103 91 chr17 5608228 5608359 -79830121 - L1ME4a LINE L1 -297 5824 5696 319 149 104 15 chr17 5608371 5608438 -79830042 + MER5B DNA MER1_type 72 144 -34 281 322 114 31 chr17 5608455 5608744 -79829736 - L1ME4a LINE L1 -2150 5658 5346 207 0 0 0 chr17 5609021 5609044 -79829436 + (CTG)n Simple_repeat Simple_repeat 2 24 0 2165 110 7 0 chr17 5609360 5609661 -79828819 - AluSx SINE Alu -9 303 1 797 216 42 6 chr17 5609914 5610081 -79828399 + MER5B DNA MER1_type 5 177 -1 343 217 250 0 chr17 5611016 5611136 -79827344 + MER5A DNA MER1_type 13 162 -27 528 223 54 34 chr17 5611142 5611290 -79827190 - MIR SINE MIR -110 152 2 228 274 81 40 chr17 5611389 5611513 -79826967 - L2 LINE L2 -212 3060 2932 1421 181 48 15 chr17 5612006 5612468 -79826012 - MER92B LTR ERV1 -2 552 1 401 263 54 70 chr17 5612844 5613030 -79825450 + MER5A DNA MER1_type 1 183 -6 * 425 289 58 28 chr17 5613018 5613339 -79825141 - L2 LINE L2 -215 3057 2727 433 333 88 5 chr17 5614527 5614743 -79823737 + L3 LINE CR1 1344 1577 0 368 261 185 0 chr17 5615257 5615376 -79823104 - MIR SINE MIR -5 257 117 3222 141 49 37 chr17 5615909 5616483 -79821997 - LTR1 LTR ERV1 -2 783 203 885 98 0 0 chr17 5616536 5616658 -79821822 - AluSq SINE Alu -13 300 179 676 91 0 0 chr17 5616658 5616746 -79821734 - AluSq SINE Alu -218 95 8 1101 93 115 11 chr17 5616746 5616928 -79821552 - LTR1 LTR ERV1 -584 201 1 299 196 22 76 chr17 5616990 5617048 -79821432 + HAL1 LINE L1 2409 2462 -45 1738 166 0 20 chr17 5617048 5617349 -79821131 - AluJo SINE Alu -17 295 1 299 196 22 76 chr17 5617349 5617382 -79821098 + HAL1 LINE L1 2462 2495 -12 1595 113 13 0 chr17 5617598 5617829 -79820651 - AluY SINE Alu -5 306 73 859 215 80 52 chr17 5618306 5618557 -79819923 + MIR SINE MIR 5 262 0 294 277 175 15 chr17 5618866 5619003 -79819477 - MER5A DNA MER1_type 0 189 31 2211 268 32 35 chr17 5620493 5621237 -79817243 + L1ME LINE L1 13 754 -5316 1733 15 0 0 chr17 5621341 5621538 -79816942 - L1P LINE L1 -1040 5106 4910 12060 26 1 2 chr17 5621538 5622947 -79815533 + L1P LINE L1 3515 4921 -1225 1645 113 41 15 chr17 5623066 5623141 -79815339 - L1PB3 LINE L1 -286 5868 5796 216 0 0 0 chr17 5623141 5623165 -79815315 + (CA)n Simple_repeat Simple_repeat 2 25 0 1645 113 41 15 chr17 5623165 5623355 -79815125 - L1PB3 LINE L1 -358 5796 5596 347 227 35 35 chr17 5623464 5623605 -79814875 - L1M4 LINE L1 -1481 4665 4525 991 265 0 0 chr17 5623741 5623964 -79814516 - MER58A DNA MER1_type 0 224 2 7965 17 0 4 chr17 5624071 5625097 -79813383 - L1PA3 LINE L1 -3 6152 5127 513 261 8 39 chr17 5625290 5625420 -79813060 - L2 LINE L2 -4 3309 3184 876 123 0 0 chr17 5625504 5625626 -79812854 + AluSq/x SINE Alu 14 135 -177 2125 132 0 0 chr17 5625626 5625936 -79812544 + AluSx SINE Alu 1 310 -2 2990 136 6 6 chr17 5625956 5626441 -79812039 + L1PA16 LINE L1 5682 6166 0 301 345 18 30 chr17 5626472 5626640 -79811840 - L2 LINE L2 -260 3053 2888 1832 164 59 0 chr17 5626791 5627114 -79811366 - MER54B LTR ERVL -451 342 1 199 265 61 10 chr17 5627167 5627265 -79811215 + L2 LINE L2 2853 2955 -317 233 271 0 12 chr17 5627692 5627777 -79810703 + GA-rich Low_complexity Low_complexity 1 84 0 384 326 98 36 chr17 5627779 5628601 -79809879 - L2 LINE L2 -82 3190 2316 302 336 18 0 chr17 5629870 5629983 -79808497 + MIR SINE MIR 34 148 -114 308 238 12 12 chr17 5630198 5630278 -79808202 + MIR SINE MIR 70 149 -113 2222 95 0 7 chr17 5630297 5630601 -79807879 - AluSg1 SINE Alu -7 302 1 1632 167 7 23 chr17 5630636 5630935 -79807545 + AluJb SINE Alu 1 294 -18 1288 237 219 9 chr17 5630950 5631406 -79807074 + L1MC4a LINE L1 7252 7803 -5 21 36 0 0 chr17 5631406 5631434 -79807046 + AT_rich Low_complexity Low_complexity 1 28 0 260 238 71 79 chr17 5632626 5632752 -79805728 + MIR SINE MIR 1 129 -79 292 271 12 12 chr17 5632944 5633029 -79805451 - L2 LINE L2 -31 3282 3198 688 271 52 49 chr17 5633200 5633548 -79804932 - L1MC/D LINE L1 -452 5669 5334 1670 141 65 3 chr17 5633648 5633938 -79804542 + AluSx SINE Alu 1 308 -4 3088 190 75 35 chr17 5635155 5635428 -79803052 - L1MB7 LINE L1 0 6184 5923 2430 50 3 0 chr17 5635428 5635729 -79802751 + AluY SINE Alu 1 302 -9 3088 190 75 35 chr17 5635729 5636232 -79802248 - L1MB7 LINE L1 -261 5923 5377 260 299 171 17 chr17 5636318 5636552 -79801928 - L1MC/D LINE L1 -1927 5881 5612 350 304 28 112 chr17 5636653 5636797 -79801683 + L3 LINE CR1 1381 1503 -74 2124 95 0 14 chr17 5636797 5637092 -79801388 - AluSx SINE Alu -19 293 3 350 304 28 112 chr17 5637092 5637161 -79801319 + L3 LINE CR1 1503 1576 -1 885 63 0 0 chr17 5637966 5638077 -79800403 - AluSc SINE Alu -10 299 189 2181 109 0 0 chr17 5638077 5638380 -79800100 + AluSg SINE Alu 3 305 -5 650 189 43 113 chr17 5638449 5638634 -79799846 + MER5B DNA MER1_type 7 178 0 270 282 13 0 chr17 5639149 5639227 -79799253 + MIR SINE MIR 57 135 -73 252 329 50 21 chr17 5639230 5639370 -79799110 - L3 LINE CR1 -137 1440 1297 2102 79 4 0 chr17 5639608 5639902 -79798578 + AluSx SINE Alu 16 310 0 602 298 124 3 chr17 5639971 5640330 -79798150 + L2 LINE L2 2623 3029 -284 1809 87 0 0 chr17 5640332 5640551 -79797929 - AluSg/x SINE Alu -19 293 75 395 119 0 0 chr17 5640552 5640611 -79797869 + AluS SINE Alu 5 63 -237 651 206 99 110 chr17 5640611 5640903 -79797577 + L2 LINE L2 3024 3312 -1 297 306 32 48 chr17 5640905 5641091 -79797389 + MIR SINE MIR 23 205 -57 2207 110 19 13 chr17 5641838 5642147 -79796333 - AluSx SINE Alu -1 311 1 672 211 146 89 chr17 5642157 5642493 -79795987 - L1ME3A LINE L1 0 6170 5816 244 195 110 0 chr17 5642862 5642944 -79795536 - L1ME LINE L1 -314 5856 5766 3738 122 14 4 chr17 5643045 5643595 -79794885 - LTR9B LTR ERV1 0 644 89 2333 71 10 3 chr17 5643595 5643892 -79794588 + AluY SINE Alu 1 299 -12 785 218 62 25 chr17 5643892 5644185 -79794295 - L1ME LINE L1 -639 5525 5224 1168 188 19 5 chr17 5645036 5645249 -79793231 - MER20 DNA MER1_type -3 216 1 558 294 84 33 chr17 5645550 5645849 -79792631 - MLT1K LTR MaLR 0 588 275 610 306 62 36 chr17 5646144 5646811 -79791669 - L1ME LINE L1 -2177 3969 3286 667 145 97 32 chr17 5647091 5647215 -79791265 + FLAM_C SINE Alu 1 132 -1 721 240 104 40 chr17 5648439 5648814 -79789666 - HAL1 LINE L1 -1012 1495 1097 1161 197 73 0 chr17 5648833 5649067 -79789413 + L1MB5 LINE L1 5858 6108 -66 460 290 52 72 chr17 5649167 5649376 -79789104 - HAL1 LINE L1 -1433 1074 873 2712 167 105 8 chr17 5649376 5649890 -79788590 + MLT1F1 LTR MaLR 4 567 0 460 290 52 72 chr17 5649890 5650028 -79788452 - HAL1 LINE L1 -1634 873 734 2076 125 0 4 chr17 5650401 5650680 -79787800 - AluSx SINE Alu -34 278 1 2302 100 0 0 chr17 5650958 5651249 -79787231 - AluSg SINE Alu -19 291 1 1035 213 0 82 chr17 5651316 5651560 -79786920 - MER58A DNA MER1_type 0 224 1 449 250 91 0 chr17 5651592 5651724 -79786756 + L1MD2 LINE L1 6211 6354 -5 1096 76 0 0 chr17 5651775 5651906 -79786574 + AluSp SINE Alu 2 132 -181 2294 96 13 0 chr17 5651908 5652210 -79786270 + AluSp SINE Alu 1 306 -7 974 156 6 31 chr17 5652540 5652700 -79785780 - FRAM SINE Alu -18 158 3 347 261 17 34 chr17 5653131 5653250 -79785230 - L2 LINE L2 -11 3261 3145 2471 91 0 0 chr17 5653859 5654168 -79784312 + AluSg SINE Alu 1 309 -1 182 194 0 0 chr17 5654404 5654440 -79784040 - L2 LINE L2 0 3313 3278 689 248 143 24 chr17 5654566 5655006 -79783474 - L2 LINE L2 -71 3242 2741 2385 79 0 3 chr17 5655009 5655300 -79783180 + AluSq SINE Alu 1 290 -23 457 121 33 0 chr17 5655300 5655391 -79783089 + G-rich Low_complexity Low_complexity 2 95 0 533 206 99 110 chr17 5655577 5655869 -79782611 - L2 LINE L2 -1 3312 3024 443 129 0 0 chr17 5655869 5655931 -79782549 - AluS SINE Alu -247 63 2 743 256 89 4 chr17 5655931 5656201 -79782279 - L2 LINE L2 -769 2545 2253 2297 95 0 13 chr17 5657674 5657979 -79780501 - AluY SINE Alu -10 301 1 267 319 25 8 chr17 5658156 5658275 -79780205 - MIR SINE MIR -29 233 113 378 303 36 18 chr17 5660150 5660315 -79778165 - L3 LINE CR1 -37 1540 1373 1686 263 70 92 chr17 5660585 5662061 -79776419 + L1MEc LINE L1 837 2237 -3978 983 234 128 35 chr17 5662061 5662104 -79776376 + L1M4 LINE L1 4287 4325 -1821 2322 115 0 0 chr17 5662104 5662408 -79776072 + AluSg SINE Alu 1 304 -6 983 234 128 35 chr17 5662408 5662740 -79775740 + L1M4 LINE L1 4325 4697 -1449 5539 148 50 35 chr17 5662747 5663139 -79775341 - Tigger3b DNA MER2_type -1797 1231 846 2276 117 0 0 chr17 5663139 5663448 -79775032 - AluSc SINE Alu 0 309 1 5539 148 50 35 chr17 5663448 5663691 -79774789 - Tigger3b DNA MER2_type -2182 846 608 189 0 0 0 chr17 5663691 5663712 -79774768 + (TATG)n Simple_repeat Simple_repeat 4 24 0 5539 148 50 35 chr17 5663712 5664002 -79774478 - Tigger3b DNA MER2_type -2420 608 286 2051 124 0 54 chr17 5664002 5664317 -79774163 + AluSq SINE Alu 1 298 -15 5539 148 50 35 chr17 5664317 5664431 -79774049 - Tigger3b DNA MER2_type -2742 286 175 1565 211 54 30 chr17 5664519 5665053 -79773427 + L1M4 LINE L1 4749 5343 -803 2574 68 0 3 chr17 5665078 5665385 -79773095 - AluY SINE Alu -5 306 1 1241 114 51 0 chr17 5665385 5665561 -79772919 - AluSg/x SINE Alu -3 309 125 378 291 7 11 chr17 5665610 5665760 -79772720 + MIR SINE MIR 21 168 -60 2745 42 0 0 chr17 5667067 5667377 -79771103 + AluY SINE Alu 1 310 -1 286 270 0 14 chr17 5667660 5667734 -79770746 - MIR SINE MIR -143 119 47 263 221 70 35 chr17 5668164 5668250 -79770230 - MIR SINE MIR -81 181 93 284 287 31 23 chr17 5668509 5668638 -79769842 + MIR3 SINE MIR 41 170 -38 1092 124 18 0 chr17 5668655 5668943 -79769537 + (TCCA)n Simple_repeat Simple_repeat 1 293 0 1029 227 10 0 chr17 5668994 5669192 -79769288 - MER58A DNA MER1_type -24 200 1 256 269 74 9 chr17 5669397 5669505 -79768975 - L2 LINE L2 -327 2986 2872 601 185 29 0 chr17 5670336 5670509 -79767971 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 772 110 25 12 chr17 5670542 5670705 -79767775 + (TCCA)n Simple_repeat Simple_repeat 1 165 0 1285 110 0 0 chr17 5670732 5670905 -79767575 - AluSp SINE Alu -1 312 140 578 276 0 0 chr17 5671257 5671402 -79767078 + MIR SINE MIR 94 238 -24 202 320 96 32 chr17 5671990 5672209 -79766271 - L3 LINE CR1 -56 1521 1289 446 273 103 56 chr17 5672355 5672438 -79766042 + MLT1H LTR MaLR 25 103 -446 2255 85 0 10 chr17 5672438 5672731 -79765749 - AluSg SINE Alu -20 290 1 446 273 103 56 chr17 5672731 5673100 -79765380 + MLT1H LTR MaLR 103 543 -6 286 318 95 24 chr17 5673174 5673300 -79765180 + MIR3 SINE MIR 49 183 -25 2049 125 0 3 chr17 5673727 5674014 -79764466 - AluSx SINE Alu -26 286 1 231 308 53 24 chr17 5674339 5674508 -79763972 + L1MDa LINE L1 1534 1707 -4833 196 213 128 0 chr17 5674543 5674590 -79763890 - L2 LINE L2 0 3313 3261 282 114 10 44 chr17 5675462 5675514 -79762966 - MLT2C1 LTR ERVL 0 520 347 2450 150 61 74 chr17 5675589 5675698 -79762782 + LTR44 LTR ERV1 1 110 -409 2339 88 7 13 chr17 5675698 5676005 -79762475 - AluSx SINE Alu -7 305 1 2450 150 61 74 chr17 5676005 5676421 -79762059 + LTR44 LTR ERV1 110 519 0 2384 160 15 75 chr17 5677378 5677915 -79760565 + LTR57-int LTR ERVL 311 815 -4528 557 132 142 0 chr17 5677915 5678021 -79760459 + LTR49-int LTR ERV1 951 1071 -7049 * 785 235 53 30 chr17 5677981 5678245 -79760235 + LTR57-int LTR ERVL 1322 1591 -3752 * 1813 179 28 37 chr17 5678011 5678448 -79760032 + LTR49-int LTR ERV1 1317 1749 -6371 1316 171 100 150 chr17 5678460 5679282 -79759198 + LTR49-int LTR ERV1 2950 3730 -2868 2234 219 100 52 chr17 5679354 5679803 -79758677 + LTR49-int LTR ERV1 2477 2903 -3335 244 33 0 0 chr17 5679803 5679833 -79758647 - MADE1 DNA Mariner 0 80 51 2234 219 100 52 chr17 5679833 5680228 -79758252 + LTR49-int LTR ERV1 2903 3278 -2960 1868 141 0 14 chr17 5680228 5680518 -79757962 - AluSx SINE Alu -14 298 13 2234 219 100 52 chr17 5680518 5680914 -79757566 + LTR49-int LTR ERV1 3278 4964 -1274 2798 135 59 43 chr17 5681183 5681280 -79757200 + LTR44 LTR ERV1 1 95 -424 2554 54 0 0 chr17 5681280 5681576 -79756904 - AluY SINE Alu -15 296 1 2798 135 59 43 chr17 5681576 5681989 -79756491 + LTR44 LTR ERV1 95 519 0 1700 210 25 6 chr17 5681995 5682348 -79756132 - MLT2D LTR ERVL -54 360 1 2369 69 24 0 chr17 5682577 5682867 -79755613 + AluSc SINE Alu 1 297 -12 492 303 154 0 chr17 5682903 5683111 -79755369 - MIR SINE MIR -21 241 2 242 239 80 11 chr17 5683461 5683549 -79754931 - L2 LINE L2 -42 3230 3137 609 254 71 61 chr17 5683587 5683653 -79754827 - LTR16C LTR ERVL -28 463 399 2219 107 0 26 chr17 5683653 5683963 -79754517 + AluSx SINE Alu 1 302 -10 609 254 71 61 chr17 5683963 5684176 -79754304 - LTR16C LTR ERVL -92 399 181 2233 104 0 3 chr17 5684865 5685162 -79753318 - AluSq SINE Alu -4 309 14 362 299 21 36 chr17 5685258 5685452 -79753028 - L2 LINE L2 -2075 1239 1049 21 0 0 0 chr17 5685831 5685852 -79752628 + AT_rich Low_complexity Low_complexity 1 21 0 2578 62 0 0 chr17 5686363 5686672 -79751808 - AluY SINE Alu -2 309 1 575 171 117 0 chr17 5686744 5686855 -79751625 - MSTA LTR MaLR 0 428 305 3398 116 40 78 chr17 5686861 5687493 -79750987 - LTR1 LTR ERV1 0 785 178 29 47 0 0 chr17 5687523 5687566 -79750914 + AT_rich Low_complexity Low_complexity 1 43 0 330 86 32 75 chr17 5687583 5687769 -79750711 + (TATAA)n Simple_repeat Simple_repeat 2 179 0 * 348 111 64 23 chr17 5687728 5687899 -79750581 + (TA)n Simple_repeat Simple_repeat 1 178 0 210 235 12 25 chr17 5687900 5687981 -79750499 + (TTATA)n Simple_repeat Simple_repeat 5 84 0 211 74 56 68 chr17 5687994 5688156 -79750324 + (TATAA)n Simple_repeat Simple_repeat 5 164 0 2069 183 112 9 chr17 5688156 5689196 -79749284 - SATR1 Satellite Satellite -5 1147 1 1950 103 0 4 chr17 5689196 5689448 -79749032 - AluSq SINE Alu -62 251 1 1647 138 0 66 chr17 5689457 5689772 -79748708 - AluSg SINE Alu 0 310 20 935 128 78 11 chr17 5689780 5689960 -79748520 - LTR1 LTR ERV1 -593 192 1 1554 136 23 58 chr17 5689960 5690268 -79748212 - MSTA LTR MaLR -131 297 1 258 32 0 0 chr17 5690311 5690342 -79748138 + (TG)n Simple_repeat Simple_repeat 2 32 0 856 299 60 20 chr17 5690355 5691356 -79747124 - L1MC4a LINE L1 -529 5710 4957 1361 226 14 44 chr17 5691527 5691890 -79746590 - MLT1A1 LTR MaLR 0 365 14 1827 126 58 3 chr17 5692008 5692301 -79746179 - AluSx SINE Alu -3 309 1 665 97 0 124 chr17 5692402 5692547 -79745933 - AluY SINE Alu 0 311 185 980 308 128 22 chr17 5692548 5693460 -79745020 - L1MC4a LINE L1 -4326 2070 1062 2053 128 3 0 chr17 5693483 5693781 -79744699 - AluY SINE Alu -12 299 1 29 0 0 0 chr17 5694222 5694251 -79744229 + AT_rich Low_complexity Low_complexity 1 29 0 1672 120 89 0 chr17 5694251 5694509 -79743971 - L1PB3 LINE L1 -7 6147 5867 528 329 80 41 chr17 5694674 5695770 -79742710 - L1M4 LINE L1 -1872 4274 3136 392 167 14 14 chr17 5696241 5696313 -79742167 - MER68 LTR ERV1 -227 335 264 2158 117 0 0 chr17 5696904 5697204 -79741276 - AluSx SINE Alu -12 300 1 2765 195 19 35 chr17 5697401 5697971 -79740509 - MER68 LTR ERV1 0 562 2 2427 68 0 0 chr17 5698384 5698694 -79739786 - AluY SINE Alu -1 310 1 524 348 51 20 chr17 5698705 5699001 -79739479 + L2 LINE L2 2186 2490 -824 410 207 112 17 chr17 5699017 5699133 -79739347 - MLT1H LTR MaLR -2 547 421 496 293 122 11 chr17 5699150 5699338 -79739142 - MLT1H LTR MaLR -328 221 13 295 367 103 33 chr17 5699379 5699909 -79738571 + L2 LINE L2 2549 3129 -143 636 181 0 0 chr17 5699978 5700083 -79738397 + MER58B DNA MER1_type 225 329 -12 1149 218 5 0 chr17 5700809 5701020 -79737460 + MER58A DNA MER1_type 1 212 -12 756 115 0 44 chr17 5702446 5702559 -79735921 - AluSg/x SINE Alu -27 285 178 300 292 0 34 chr17 5702564 5702653 -79735827 + MIR SINE MIR 106 191 -71 2155 107 0 7 chr17 5702750 5703049 -79735431 - AluSx SINE Alu -15 297 1 1622 148 0 21 chr17 5703925 5704209 -79734271 - AluSc SINE Alu -3 306 29 305 302 87 8 chr17 5705081 5705207 -79733273 + MIR3 SINE MIR 69 204 -4 1033 49 18 18 chr17 5705336 5705499 -79732981 + (TTTC)n Simple_repeat Simple_repeat 4 166 0 337 130 43 0 chr17 5705507 5705576 -79732904 + CT-rich Low_complexity Low_complexity 2 73 0 1781 173 3 25 chr17 5705576 5705894 -79732586 - AluJo SINE Alu -1 311 1 603 363 116 3 chr17 5706215 5706604 -79731876 - L3 LINE CR1 -1 1576 1144 368 289 134 34 chr17 5706869 5707018 -79731462 - MIR3 SINE MIR -11 197 34 411 327 61 6 chr17 5707676 5707841 -79730639 + MIR SINE MIR 33 206 -56 560 200 9 0 chr17 5708012 5708122 -79730358 - MIR SINE MIR 0 262 152 1218 178 22 18 chr17 5708123 5708348 -79730132 + MER46A DNA MER2_type 3 228 -8 280 290 120 0 chr17 5708354 5708454 -79730026 - MIR SINE MIR -108 154 43 334 311 114 0 chr17 5708502 5708598 -79729882 - HAL1 LINE L1 -1016 1491 1375 2241 103 3 0 chr17 5708598 5708910 -79729570 - AluSp SINE Alu 0 313 1 334 311 114 0 chr17 5708910 5708945 -79729535 - HAL1 LINE L1 -1132 1375 1345 331 320 61 30 chr17 5708947 5709310 -79729170 - L1MEd LINE L1 -4886 1233 860 2089 131 0 6 chr17 5709854 5710168 -79728312 - AluSx SINE Alu 0 312 1 32 43 0 0 chr17 5710269 5710315 -79728165 + AT_rich Low_complexity Low_complexity 1 46 0 2058 97 0 58 chr17 5710517 5710847 -79727633 - AluSx SINE Alu -1 311 1 188 67 33 0 chr17 5712271 5712301 -79726179 + (TTCA)n Simple_repeat Simple_repeat 3 33 0 2178 79 10 0 chr17 5712303 5712593 -79725887 - AluSp SINE Alu -20 293 1 189 0 0 0 chr17 5713034 5713055 -79725425 + (T)n Simple_repeat Simple_repeat 1 21 0 944 191 46 128 chr17 5713577 5713750 -79724730 + MLT1B LTR MaLR 2 187 -203 2107 84 16 26 chr17 5713750 5714059 -79724421 + AluY SINE Alu 1 306 -5 944 191 46 128 chr17 5714059 5714179 -79724301 + MLT1B LTR MaLR 187 266 -124 1907 127 21 3 chr17 5714179 5714470 -79724010 + AluSx SINE Alu 1 296 -16 944 191 46 128 chr17 5714470 5714520 -79723960 + MLT1B LTR MaLR 266 318 -72 330 306 61 16 chr17 5714721 5714869 -79723611 - MIR SINE MIR -61 147 33 321 152 0 0 chr17 5717865 5717911 -79720569 + MER46A DNA MER2_type 1 46 -190 674 241 99 112 chr17 5718547 5719011 -79719469 + LTR33A LTR ERVL 66 523 0 356 298 158 14 chr17 5719077 5719439 -79719041 + L2 LINE L2 2460 2873 -441 2144 110 3 0 chr17 5719521 5719821 -79718659 - AluSx SINE Alu -11 301 1 542 365 36 18 chr17 5719853 5720130 -79718350 + L2 LINE L2 2966 3247 -25 919 148 228 0 chr17 5720844 5721033 -79717447 + MER46A DNA MER2_type 1 232 -4 1257 245 52 16 chr17 5721103 5721449 -79717031 + L1MD2 LINE L1 5978 6339 -20 2119 104 3 0 chr17 5721449 5721738 -79716742 - AluSg SINE Alu -20 290 1 1257 245 52 16 chr17 5721738 5721759 -79716721 + L1MD2 LINE L1 6339 6358 -1 459 152 0 0 chr17 5722527 5722606 -79715874 + (TG)n Simple_repeat Simple_repeat 1 79 0 302 323 57 31 chr17 5722783 5722975 -79715505 + MIR3 SINE MIR 1 197 -11 710 294 97 32 chr17 5723190 5723499 -79714981 - L3 LINE CR1 -106 1471 1143 2445 77 3 0 chr17 5723506 5723816 -79714664 - AluSp SINE Alu -2 311 1 237 292 52 0 chr17 5724123 5724219 -79714261 - L1ME LINE L1 -331 5790 5690 354 258 116 32 chr17 5724486 5724641 -79713839 + MIR SINE MIR 1 168 -94 1668 220 108 7 chr17 5724671 5725116 -79713364 - MLT1D LTR MaLR 0 505 16 1363 247 105 70 chr17 5725147 5725747 -79712733 + L2 LINE L2 2110 2730 -584 306 118 0 0 chr17 5726492 5726543 -79711937 - L1MB2 LINE L1 -1 6170 6120 1990 124 7 13 chr17 5726543 5726842 -79711638 - AluSq SINE Alu -16 297 1 362 297 120 0 chr17 5727783 5727958 -79710522 + MIR SINE MIR 51 246 -16 5105 56 0 0 chr17 5728372 5728993 -79709487 - L1PA8 LINE L1 0 6172 5552 180 250 0 0 chr17 5729087 5729123 -79709357 - MIR SINE MIR -70 192 157 375 23 0 0 chr17 5729280 5729324 -79709156 + (CA)n Simple_repeat Simple_repeat 2 45 0 1766 195 74 39 chr17 5729629 5729897 -79708583 - MLT1D LTR MaLR -4 501 209 204 67 0 0 chr17 5729897 5729927 -79708553 + (CACAT)n Simple_repeat Simple_repeat 4 33 0 1766 195 74 39 chr17 5729927 5730120 -79708360 - MLT1D LTR MaLR -296 209 24 253 247 47 47 chr17 5730363 5730448 -79708032 + ERVL LTR ERVL 3427 3511 -2253 2485 203 30 18 chr17 5730608 5731110 -79707370 - LTR40a LTR ERVL -4 515 8 212 149 257 40 chr17 5731172 5731246 -79707234 - MIR SINE MIR -66 196 107 684 320 44 55 chr17 5731301 5731484 -79706996 + ERVL LTR ERVL 4302 4485 -1279 2000 109 35 0 chr17 5731484 5731769 -79706711 - AluSp SINE Alu -18 295 1 684 320 44 55 chr17 5731769 5732041 -79706439 + ERVL LTR ERVL 4485 4752 -1012 378 241 23 11 chr17 5732103 5732190 -79706290 + ERVL LTR ERVL 4894 4981 -783 1939 144 0 0 chr17 5732694 5733000 -79705480 - AluSx SINE Alu -6 306 1 2205 92 0 13 chr17 5733119 5733425 -79705055 - AluSq SINE Alu -11 302 1 3316 152 29 15 chr17 5734014 5734285 -79704195 + L1MB3 LINE L1 5562 5828 -355 2262 95 0 3 chr17 5734285 5734590 -79703890 + AluSq SINE Alu 1 304 -9 3316 152 29 15 chr17 5734590 5734931 -79703549 + L1MB3 LINE L1 5828 6183 0 2121 124 0 3 chr17 5734942 5735256 -79703224 + AluSq SINE Alu 1 313 0 207 353 35 0 chr17 5735836 5735921 -79702559 + MIR SINE MIR 62 149 -59 186 80 9 0 chr17 5736640 5736715 -79701765 + (A)n Simple_repeat Simple_repeat 1 30 0 268 200 67 40 chr17 5736965 5737040 -79701440 - MER5B DNA MER1_type -101 77 1 381 307 200 5 chr17 5738122 5738327 -79700153 + MIR SINE MIR 17 261 -1 882 292 41 55 chr17 5738441 5738879 -79699601 + MLT1K LTR MaLR 140 571 -17 2110 110 0 0 chr17 5739875 5740175 -79698305 + AluY SINE Alu 1 300 -11 2172 124 51 28 chr17 5740481 5740837 -79697643 + THE1B LTR MaLR 1 364 0 2155 115 3 7 chr17 5742363 5742658 -79695822 - AluSq SINE Alu -19 294 1 353 282 147 29 chr17 5742836 5742957 -79695523 - MIR SINE MIR -70 192 44 2482 193 107 4 chr17 5742957 5743374 -79695106 - MLT1F1 LTR MaLR 0 567 86 198 0 0 0 chr17 5743374 5743396 -79695084 + (TTCA)n Simple_repeat Simple_repeat 4 25 0 2482 193 107 4 chr17 5743396 5743492 -79694988 - MLT1F1 LTR MaLR -481 86 1 353 282 147 29 chr17 5743492 5743540 -79694940 - MIR SINE MIR -218 44 3 290 317 138 17 chr17 5743952 5744311 -79694169 + L2 LINE L2 2644 3043 -229 189 0 0 0 chr17 5745580 5745601 -79692879 + (T)n Simple_repeat Simple_repeat 1 21 0 581 256 93 6 chr17 5745849 5746021 -79692459 - LTR33A LTR ERVL -40 483 297 208 316 26 0 chr17 5746240 5746316 -79692164 - L2 LINE L2 -633 2681 2604 767 230 7 0 chr17 5746322 5746474 -79692006 - MLT1E LTR MaLR -8 585 433 448 191 101 0 chr17 5746531 5746620 -79691860 - MLT1E1 LTR MaLR -556 98 1 360 165 24 24 chr17 5746620 5746705 -79691775 - L2 LINE L2 -704 2610 2526 2238 113 0 3 chr17 5747331 5747624 -79690856 - AluSq SINE Alu -17 296 5 375 325 132 8 chr17 5747729 5747845 -79690635 - L2 LINE L2 -337 2977 2877 2025 127 0 17 chr17 5747845 5748145 -79690335 + AluSq SINE Alu 1 295 -18 375 325 132 8 chr17 5748145 5748271 -79690209 - L2 LINE L2 -437 2877 2705 2402 90 0 3 chr17 5749395 5749695 -79688785 - AluSx SINE Alu -13 299 1 380 222 32 56 chr17 5749751 5749774 -79688706 - MIR SINE MIR -131 131 109 2068 211 132 9 chr17 5749774 5750304 -79688176 + MLT1G1 LTR MaLR 1 595 0 380 222 32 56 chr17 5750304 5750406 -79688074 - MIR SINE MIR -153 109 9 183 231 58 0 chr17 5750407 5750459 -79688021 + MIR SINE MIR 194 248 -14 241 317 0 0 chr17 5751248 5751308 -79687172 + (TCTA)n Simple_repeat Simple_repeat 2 61 0 639 251 112 27 chr17 5751315 5751538 -79686942 + MIR SINE MIR 1 242 -20 2046 142 0 40 chr17 5751745 5752068 -79686412 - AluSx SINE Alu -2 310 1 191 233 194 0 chr17 5752135 5752238 -79686242 - MIR SINE MIR -69 193 71 2288 116 0 0 chr17 5752869 5753170 -79685310 - AluSx SINE Alu -11 301 1 2392 97 3 0 chr17 5753405 5753705 -79684775 - AluSp SINE Alu -12 301 1 1438 217 32 32 chr17 5753734 5754075 -79684405 - MER58B DNA MER1_type 0 341 1 1444 43 0 32 chr17 5754452 5754639 -79683841 - L1PA8 LINE L1 -400 5772 5592 2871 71 15 18 chr17 5754639 5755030 -79683450 + L1PA8 LINE L1 5779 6170 -2 24 32 0 0 chr17 5755824 5755855 -79682625 + AT_rich Low_complexity Low_complexity 1 31 0 649 305 102 24 chr17 5756094 5756514 -79681966 + MLT1K LTR MaLR 101 553 -35 207 0 0 0 chr17 5756975 5756998 -79681482 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 248 77 26 0 chr17 5757279 5757318 -79681162 + (TTCC)n Simple_repeat Simple_repeat 3 42 0 8224 194 33 26 chr17 5757328 5759560 -79678920 - L1MC1 LINE L1 -7 6326 4111 2424 61 3 14 chr17 5759560 5759857 -79678623 - AluY SINE Alu -17 294 1 8224 194 33 26 chr17 5759857 5760153 -79678327 - L1MC1 LINE L1 -2222 4111 3819 2488 62 7 7 chr17 5760153 5760460 -79678020 - AluY SINE Alu -4 307 1 8224 194 33 26 chr17 5760460 5761086 -79677394 - L1MC1 LINE L1 -2514 3819 3153 2398 212 11 6 chr17 5761354 5761902 -79676578 + L1 LINE L1 4242 4792 -1354 22 70 0 0 chr17 5761924 5761967 -79676513 + AT_rich Low_complexity Low_complexity 1 43 0 4801 79 5 2 chr17 5761967 5762603 -79675877 - L1PB1 LINE L1 0 6151 5514 394 223 90 42 chr17 5762605 5762771 -79675709 - MLT1D LTR MaLR -219 286 113 916 197 112 5 chr17 5762838 5763017 -79675463 + MSTA LTR MaLR 1 202 -226 1971 98 52 38 chr17 5763017 5763304 -79675176 + AluSx SINE Alu 1 291 -21 2445 102 0 0 chr17 5763314 5763656 -79674824 - L1P LINE L1 -3154 2992 2651 4416 33 0 0 chr17 5763656 5764167 -79674313 + L1PA7 LINE L1 5642 6154 0 1228 159 100 9 chr17 5764171 5764391 -79674089 + MSTA LTR MaLR 187 426 -2 936 203 95 0 chr17 5764411 5764652 -79673828 + L1MA4 LINE L1 6036 6299 -1 1869 137 48 0 chr17 5764684 5764976 -79673504 + AluSp SINE Alu 1 306 -7 2298 118 0 9 chr17 5765714 5766029 -79672451 + AluSx SINE Alu 1 312 0 1919 233 99 8 chr17 5767723 5768229 -79670251 - MLT1H1 LTR MaLR 0 555 4 307 293 47 0 chr17 5768356 5768462 -79670018 + MIR SINE MIR 118 228 -34 305 200 128 124 chr17 5768552 5768802 -79669678 - MER112 DNA MER1_type -9 251 1 257 185 46 169 chr17 5769567 5769762 -79668718 + MLT1K LTR MaLR 408 578 -10 505 239 104 54 chr17 5770778 5771000 -79667480 + MER112 DNA MER1_type 3 235 -25 320 325 62 44 chr17 5771058 5771475 -79667005 - L2 LINE L2 -218 3054 2623 231 280 40 103 chr17 5771526 5771701 -79666779 - MER91A DNA MER1_type -32 164 1 207 303 71 10 chr17 5773114 5773213 -79665267 - MIR SINE MIR -130 132 28 1705 193 58 28 chr17 5774311 5774552 -79663928 + MLT1C LTR MaLR 22 281 -186 1668 102 0 4 chr17 5774552 5774777 -79663703 + AluSq SINE Alu 86 309 -4 1705 193 58 28 chr17 5774777 5774928 -79663552 + MLT1C LTR MaLR 281 426 -41 2269 95 6 25 chr17 5775620 5775935 -79662545 - AluSx SINE Alu -1 311 3 1415 218 51 9 chr17 5776753 5777069 -79661411 + Charlie1a DNA MER1_type 14 342 -1113 2033 67 0 0 chr17 5777085 5777355 -79661125 + AluY SINE Alu 44 313 0 1481 213 45 3 chr17 5777355 5777669 -79660811 - Charlie1a DNA MER1_type -1115 340 14 4380 185 102 18 chr17 5778066 5779107 -79659373 + Charlie1a DNA MER1_type 327 1454 -1 2001 137 42 70 chr17 5779476 5779642 -79658838 + MLT1B LTR MaLR 1 170 -220 2561 65 0 3 chr17 5779642 5779949 -79658531 + AluY SINE Alu 1 306 -5 2001 137 42 70 chr17 5779949 5780183 -79658297 + MLT1B LTR MaLR 170 390 0 1242 200 19 0 chr17 5780517 5780777 -79657703 + MER33 DNA MER1_type 1 265 -59 5277 147 39 4 chr17 5780782 5781814 -79656666 + L1PA8 LINE L1 5111 6174 0 2237 124 8 39 chr17 5781814 5782068 -79656412 + L1PA16 LINE L1 5778 6017 -149 2099 170 75 12 chr17 5782068 5782467 -79656013 + MSTB LTR MaLR 3 426 0 2237 124 8 39 chr17 5782467 5782599 -79655881 + L1PA16 LINE L1 6017 6152 -14 2373 69 0 39 chr17 5783059 5783365 -79655115 - AluYa5 SINE Alu -16 295 2 892 247 11 0 chr17 5783493 5783679 -79654801 + MER5A DNA MER1_type 1 188 -1 884 45 18 0 chr17 5783992 5784104 -79654376 + L1PA5 LINE L1 6039 6152 -2 290 186 29 20 chr17 5784426 5784528 -79653952 + CT-rich Low_complexity Low_complexity 2 104 0 329 250 12 12 chr17 5784579 5784663 -79653817 - MIR SINE MIR -21 241 158 546 206 66 0 chr17 5784767 5784900 -79653580 - MIR SINE MIR -52 156 17 1534 197 14 17 chr17 5785300 5785661 -79652819 + L1P LINE L1 4984 5343 -803 3231 233 36 17 chr17 5786169 5787075 -79651405 - L1ME1 LINE L1 -61 6900 5986 915 138 22 2 chr17 5787075 5787235 -79651245 + L1PB1 LINE L1 5989 6154 0 2451 253 95 29 chr17 5787249 5788685 -79649795 - L1ME1 LINE L1 -954 5987 4387 1312 233 75 30 chr17 5788710 5789233 -79649247 - L1ME1 LINE L1 -3526 3415 2897 6761 244 30 22 chr17 5789680 5790064 -79648416 - L1ME1 LINE L1 -4176 2946 2566 2001 98 4 4 chr17 5790064 5790330 -79648150 - AluSc SINE Alu -13 296 31 6761 244 30 22 chr17 5790330 5792683 -79645797 - L1ME1 LINE L1 -4556 2566 1 1416 224 139 91 chr17 5792781 5793299 -79645181 - MLT1G1 LTR MaLR 0 595 53 1435 172 0 48 chr17 5793300 5793403 -79645077 + AluJb SINE Alu 37 143 -169 1990 114 31 0 chr17 5793403 5793693 -79644787 + AluSq SINE Alu 1 299 -14 596 38 13 0 chr17 5793693 5793772 -79644708 + (TCTA)n Simple_repeat Simple_repeat 4 83 0 1435 172 0 48 chr17 5793772 5793957 -79644523 + AluJb SINE Alu 141 312 0 344 127 16 32 chr17 5793965 5794028 -79644452 - MLT1G1 LTR MaLR -533 62 1 679 296 22 30 chr17 5794327 5794557 -79643923 + MIR SINE MIR 28 255 -7 2107 101 0 3 chr17 5794558 5794846 -79643634 - AluSx SINE Alu -12 300 14 188 387 54 0 chr17 5795103 5795196 -79643284 - MIR SINE MIR -128 134 37 1141 124 0 17 chr17 5795555 5795733 -79642747 - AluSg/x SINE Alu -1 311 137 2331 60 0 3 chr17 5796167 5796478 -79642002 + AluSp SINE Alu 1 310 0 261 326 45 0 chr17 5796872 5796961 -79641519 + MIR SINE MIR 47 139 -69 2862 141 22 13 chr17 5797681 5797786 -79640694 + LTR24 LTR ERV1 10 113 -354 2158 95 24 0 chr17 5797786 5798081 -79640399 - AluSp SINE Alu -11 302 1 2862 141 22 13 chr17 5798081 5798429 -79640051 + LTR24 LTR ERV1 113 467 0 387 276 55 31 chr17 5798449 5798612 -79639868 - L1ME3 LINE L1 -1 6161 5995 321 130 0 0 chr17 5798613 5798659 -79639821 - L1PA5 LINE L1 -202 5952 5907 * 1751 76 25 4 chr17 5798632 5798869 -79639611 + L1PA4 LINE L1 5914 6155 0 264 240 39 19 chr17 5799378 5799482 -79638998 - L1ME3 LINE L1 -58 6104 5999 2204 84 19 0 chr17 5799719 5800109 -79638371 - L1M3 LINE L1 -581 5602 5201 1508 71 0 15 chr17 5800109 5800305 -79638175 + L1PA8 LINE L1 5973 6166 -6 798 188 17 33 chr17 5800308 5800489 -79637991 - L1MC3 LINE L1 -6 7779 7602 * 3995 189 38 6 chr17 5800488 5800934 -79637546 - L1MC3 LINE L1 -457 7328 6845 252 0 0 0 chr17 5800934 5800962 -79637518 + (TG)n Simple_repeat Simple_repeat 2 29 0 3995 189 38 6 chr17 5800962 5801296 -79637184 - L1MC3 LINE L1 -940 6845 6523 588 136 48 0 chr17 5801321 5801424 -79637056 + FRAM SINE Alu 69 176 0 319 148 0 0 chr17 5801428 5801482 -79636998 - L1MC3 LINE L1 -1635 6150 6097 2615 193 105 15 chr17 5801486 5801843 -79636637 - L1MC3 LINE L1 -1265 6520 6197 2084 106 3 3 chr17 5801843 5802135 -79636345 - AluSx SINE Alu -20 292 1 2615 193 105 15 chr17 5802135 5802166 -79636314 - L1MC3 LINE L1 -1588 6197 6170 1458 186 29 11 chr17 5802166 5802440 -79636040 + AluJo SINE Alu 1 279 -33 2615 193 105 15 chr17 5802440 5802728 -79635752 - L1MC3 LINE L1 -1615 6170 5782 2470 173 22 88 chr17 5802737 5802959 -79635521 - MER44D DNA MER2_type -1890 597 362 2051 93 3 45 chr17 5802959 5803270 -79635210 - AluY SINE Alu -13 298 1 2470 173 22 88 chr17 5803270 5803625 -79634855 - MER44D DNA MER2_type -2125 362 3 849 141 4 40 chr17 5803626 5803808 -79634672 - L1MC3 LINE L1 -560 5784 5606 2193 100 0 6 chr17 5803816 5804127 -79634353 + AluSq SINE Alu 5 313 0 5610 243 31 47 chr17 5804135 5804712 -79633768 - L1MC3 LINE L1 -8 7777 7193 2099 124 0 0 chr17 5804712 5805019 -79633461 - AluSx SINE Alu -5 307 1 5610 243 31 47 chr17 5805019 5806193 -79632287 - L1MC3 LINE L1 -592 7193 6053 771 250 72 19 chr17 5806210 5806474 -79632006 - L1ME3A LINE L1 -229 5941 5664 315 283 142 25 chr17 5806513 5806633 -79631847 - L1MEd LINE L1 -5967 152 19 188 353 25 49 chr17 5806706 5806828 -79631652 - MIR3 SINE MIR -75 133 15 224 303 0 15 chr17 5807053 5807119 -79631361 + GA-rich Low_complexity Low_complexity 1 65 0 664 311 78 91 chr17 5809074 5809181 -79629299 + L1M4 LINE L1 2142 2249 -3897 2126 103 7 3 chr17 5809181 5809483 -79628997 + AluSx SINE Alu 1 303 -9 664 311 78 91 chr17 5809483 5810179 -79628301 + L1M4 LINE L1 2249 2935 -3211 2029 71 0 15 chr17 5810192 5810459 -79628021 + AluY SINE Alu 1 263 -48 186 43 0 0 chr17 5810468 5810491 -79627989 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2072 129 0 0 chr17 5810515 5810809 -79627671 + AluSx SINE Alu 1 294 -18 711 325 57 61 chr17 5810813 5811238 -79627242 + L1M4 LINE L1 2956 3378 -2768 280 309 135 39 chr17 5811350 5811415 -79627065 + L2 LINE L2 922 979 -2335 2231 77 3 3 chr17 5811415 5811713 -79626767 - AluY SINE Alu -13 298 1 280 309 135 39 chr17 5811713 5811906 -79626574 + L2 LINE L2 979 1205 -2109 1572 224 132 50 chr17 5812073 5812574 -79625906 + MLT1F LTR MaLR 1 542 0 225 0 0 0 chr17 5812844 5812869 -79625611 + (TG)n Simple_repeat Simple_repeat 2 26 0 452 314 32 11 chr17 5812880 5813068 -79625412 - L1MC4 LINE L1 -130 7912 7721 714 179 0 0 chr17 5813504 5813621 -79624859 - AluJb SINE Alu -194 118 2 1107 228 104 31 chr17 5813760 5814146 -79624334 - L1MC4 LINE L1 -466 7576 7163 22 0 0 0 chr17 5814770 5814792 -79623688 + AT_rich Low_complexity Low_complexity 1 22 0 531 239 18 0 chr17 5815302 5815411 -79623069 - MER81 DNA DNA -3 111 1 201 74 0 0 chr17 5815685 5815712 -79622768 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 188 299 69 11 chr17 5815714 5815801 -79622679 + L2 LINE L2 1874 1965 -1349 383 259 36 67 chr17 5815803 5816027 -79622453 + L1M4 LINE L1 4229 4445 -1701 856 217 28 0 chr17 5816047 5816227 -79622253 - MER5A DNA MER1_type -4 185 1 461 309 130 30 chr17 5816274 5816743 -79621737 + L2 LINE L2 1982 2497 -817 422 304 8 16 chr17 5817318 5817443 -79621037 + MIR3 SINE MIR 82 205 -3 207 0 0 0 chr17 5817819 5817842 -79620638 + (CA)n Simple_repeat Simple_repeat 2 24 0 1929 212 28 42 chr17 5818129 5818323 -79620157 - L1ME2 LINE L1 -108 6056 5861 1924 131 3 13 chr17 5818323 5818629 -79619851 + AluSq SINE Alu 3 305 -8 1929 212 28 42 chr17 5818629 5818935 -79619545 - L1ME2 LINE L1 -303 5861 5563 199 279 295 23 chr17 5819472 5819601 -79618879 - MIR3 SINE MIR -29 179 16 3558 128 60 15 chr17 5819732 5820316 -79618164 - LTR31 LTR ERV1 -9 610 1 844 171 0 0 chr17 5821448 5821588 -79616892 - LTR31 LTR ERV1 -111 508 369 196 318 30 0 chr17 5822692 5822758 -79615722 - MIR3 SINE MIR -24 184 117 547 209 62 16 chr17 5823359 5823488 -79614992 - Tigger1 DNA MER2_type 0 2418 2284 2648 244 105 45 chr17 5823488 5824576 -79613904 - L1ME3 LINE L1 -275 5887 4866 180 0 0 0 chr17 5824576 5824596 -79613884 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 2648 244 105 45 chr17 5824596 5824635 -79613845 - L1ME3 LINE L1 -1296 4866 4831 2770 10 0 0 chr17 5824635 5824946 -79613534 - AluYa5 SINE Alu 0 311 1 2648 244 105 45 chr17 5824946 5825652 -79612828 - L1ME3 LINE L1 -1331 4831 3923 1931 125 11 0 chr17 5825652 5825973 -79612507 + AluSx SINE Alu 1 324 0 2648 244 105 45 chr17 5825973 5826040 -79612440 - L1ME3 LINE L1 -2239 3923 3861 2115 109 3 13 chr17 5826972 5827259 -79611221 + AluSg SINE Alu 1 286 -24 207 0 0 0 chr17 5827259 5827282 -79611198 + (TTAA)n Simple_repeat Simple_repeat 1 23 0 2115 109 3 13 chr17 5827282 5827307 -79611173 + AluSg SINE Alu 286 310 0 420 20 0 0 chr17 5828233 5828282 -79610198 + (TG)n Simple_repeat Simple_repeat 1 49 0 243 61 0 0 chr17 5828282 5828315 -79610165 + (TGG)n Simple_repeat Simple_repeat 3 35 0 289 309 90 51 chr17 5828315 5828626 -79609854 - L2 LINE L2 -337 2977 2655 275 275 297 0 chr17 5828602 5828666 -79609814 + MER5A DNA MER1_type 11 55 -134 * 2614 81 23 3 chr17 5828666 5829014 -79609466 - THE1A LTR MaLR 0 355 1 275 275 297 0 chr17 5829014 5829087 -79609393 + MER5A DNA MER1_type 55 189 0 213 362 26 9 chr17 5829116 5829232 -79609248 - L2 LINE L2 -639 2675 2558 276 233 93 35 chr17 5830353 5830439 -79608041 - L2 LINE L2 -40 3232 3142 225 298 54 127 chr17 5830798 5831184 -79607296 - L2 LINE L2 -94 3178 2821 193 332 142 40 chr17 5831717 5831970 -79606510 - L2 LINE L2 -99 3173 2895 644 204 0 0 chr17 5831999 5832112 -79606368 + Charlie3 DNA MER1_type 1 113 -2597 1962 126 0 16 chr17 5832112 5832429 -79606051 - AluSx SINE Alu 0 312 1 1651 274 88 32 chr17 5832440 5832791 -79605689 - L2 LINE L2 -243 3070 2740 2092 107 24 0 chr17 5832791 5833081 -79605399 + AluSx SINE Alu 1 297 -15 1651 274 88 32 chr17 5833081 5833438 -79605042 - L2 LINE L2 -573 2740 2316 643 290 71 25 chr17 5833773 5833914 -79604566 + MIR SINE MIR 4 162 -100 1317 145 114 77 chr17 5833914 5834266 -79604214 - MLT1A1 LTR MaLR 0 365 1 643 290 71 25 chr17 5834266 5834362 -79604118 + MIR SINE MIR 162 252 -10 2058 121 3 0 chr17 5834393 5834690 -79603790 - AluSq SINE Alu -15 298 1 376 236 13 66 chr17 5835429 5835586 -79602894 + MIR SINE MIR 2 147 -65 1786 170 61 86 chr17 5836081 5836331 -79602149 - MSTB LTR MaLR -7 419 183 2196 101 0 3 chr17 5836331 5836628 -79601852 - AluSx SINE Alu -16 296 1 1786 170 61 86 chr17 5836628 5836806 -79601674 - MSTB LTR MaLR -243 183 2 213 220 51 17 chr17 5837291 5837350 -79601130 - MIR SINE MIR -109 153 93 584 317 58 24 chr17 5838126 5838331 -79600149 - MIR SINE MIR -23 239 28 1894 112 0 0 chr17 5838363 5838631 -79599849 - AluSc SINE Alu 0 309 42 209 238 16 48 chr17 5838974 5839037 -79599443 - L2 LINE L2 -80 3192 3132 1579 225 71 88 chr17 5839179 5839744 -79598736 + MER68 LTR ERV1 2 556 -6 235 316 125 45 chr17 5839753 5840135 -79598345 - L2 LINE L2 -264 3008 2597 1254 151 18 18 chr17 5840370 5840588 -79597892 + MER20 DNA MER1_type 1 218 -1 850 194 15 63 chr17 5840598 5840804 -79597676 + MER3 DNA MER1_type 2 197 -12 534 299 0 7 chr17 5841520 5841667 -79596813 - MIR SINE MIR -95 167 22 2208 116 0 0 chr17 5841668 5841966 -79596514 - AluSx SINE Alu -28 284 1 749 226 26 15 chr17 5842594 5842789 -79595691 - MER117 DNA MER1_type 0 197 1 361 217 11 22 chr17 5842981 5843073 -79595407 - L3 LINE CR1 -97 1480 1390 2462 88 0 0 chr17 5843239 5843545 -79594935 + AluY SINE Alu 1 306 -5 324 250 105 24 chr17 5843586 5843710 -79594770 - L3 LINE CR1 -197 1380 1247 328 275 0 55 chr17 5843916 5844025 -79594455 - L2 LINE L2 -1 3271 3169 306 253 0 58 chr17 5844305 5844343 -79594137 - L1MC4 LINE L1 -1349 6693 6654 1932 114 3 50 chr17 5844343 5844670 -79593810 - AluSx SINE Alu 0 313 1 306 253 0 58 chr17 5844670 5844717 -79593763 - L1MC4 LINE L1 -1388 6654 6612 300 256 67 44 chr17 5844674 5844764 -79593716 + L1MC4 LINE L1 6614 6705 -1337 * 235 101 13 51 chr17 5844769 5844848 -79593632 + (TA)n Simple_repeat Simple_repeat 2 77 0 2233 167 38 38 chr17 5844850 5845353 -79593127 - L1MB4 LINE L1 -33 6147 5645 1765 176 38 32 chr17 5845417 5845801 -79592679 + MLT1B LTR MaLR 1 420 -8 21 0 0 0 chr17 5845863 5845884 -79592596 + AT_rich Low_complexity Low_complexity 1 21 0 794 173 0 0 chr17 5845933 5846066 -79592414 - FLAM_C SINE Alu 0 133 1 511 289 128 22 chr17 5846254 5846614 -79591866 - L1M4 LINE L1 -1242 4904 4507 22 0 0 0 chr17 5846630 5846652 -79591828 + AT_rich Low_complexity Low_complexity 1 22 0 721 315 43 40 chr17 5846834 5847055 -79591425 - L2 LINE L2 -567 2747 2523 2208 83 35 3 chr17 5847055 5847343 -79591137 + AluSg1 SINE Alu 1 297 -12 721 315 43 40 chr17 5847343 5847470 -79591010 - L2 LINE L2 -791 2523 2398 725 126 0 0 chr17 5848472 5848591 -79589889 + AluSg/x SINE Alu 193 311 -1 2225 116 7 3 chr17 5849790 5850092 -79588388 - AluSg SINE Alu -7 303 1 401 66 16 0 chr17 5850143 5850204 -79588276 + (GA)n Simple_repeat Simple_repeat 2 63 0 604 281 38 19 chr17 5850527 5850737 -79587743 - MIR SINE MIR -3 259 46 461 243 215 0 chr17 5850916 5851060 -79587420 - MER45A DNA AcHobo 0 178 4 946 140 21 0 chr17 5851407 5851574 -79586906 - AluSg/x SINE Alu 0 304 135 271 376 0 32 chr17 5852444 5852630 -79585850 + (TG)n Simple_repeat Simple_repeat 1 180 0 * 282 294 39 0 chr17 5852543 5852645 -79585835 + (TATATG)n Simple_repeat Simple_repeat 2 107 0 2029 123 34 3 chr17 5852724 5853016 -79585464 + AluSx SINE Alu 1 301 -11 303 242 78 47 chr17 5854726 5854854 -79583626 - L2 LINE L2 -7 3265 3134 246 183 0 0 chr17 5854990 5855047 -79583433 - MIR SINE MIR -65 143 96 393 22 0 0 chr17 5855124 5855170 -79583310 + (TG)n Simple_repeat Simple_repeat 2 47 0 2146 90 0 4 chr17 5855170 5855437 -79583043 - AluSq SINE Alu -26 287 22 527 261 55 12 chr17 5856036 5856201 -79582279 + MIR SINE MIR 47 218 -44 2459 56 0 0 chr17 5856513 5856885 -79581595 + AluY SINE Alu 1 372 0 1428 229 8 43 chr17 5857760 5858008 -79580472 + L1MD3 LINE L1 7634 7866 -129 2064 149 0 0 chr17 5858008 5858297 -79580183 + AluSx SINE Alu 1 289 -23 1428 229 8 43 chr17 5858297 5858420 -79580060 + L1MD3 LINE L1 7866 7992 -3 347 329 87 0 chr17 5859089 5859238 -79579242 - MIR3 SINE MIR -30 178 17 288 266 133 90 chr17 5860080 5860358 -79578122 - L2 LINE L2 -2 3311 3022 182 372 0 39 chr17 5860383 5860461 -79578019 + L3 LINE CR1 398 472 -1105 * 332 341 66 24 chr17 5860456 5860623 -79577857 - MIR SINE MIR 0 262 89 302 302 145 17 chr17 5860703 5860875 -79577605 + L3 LINE CR1 473 666 -911 356 318 55 28 chr17 5860920 5861137 -79577343 + L2 LINE L2 2836 3058 -214 384 40 0 0 chr17 5861178 5861228 -79577252 + (TCTA)n Simple_repeat Simple_repeat 3 52 0 539 267 136 30 chr17 5861230 5861742 -79576738 + MLT1L LTR MaLR 10 615 0 180 354 154 15 chr17 5861777 5861907 -79576573 + L2 LINE L2 3124 3271 -1 603 244 60 0 chr17 5862825 5862993 -79575487 + MER45A DNA AcHobo 1 178 0 366 23 0 0 chr17 5863728 5863771 -79574709 + (TG)n Simple_repeat Simple_repeat 1 43 0 207 0 0 0 chr17 5863770 5863793 -79574687 + (GA)n Simple_repeat Simple_repeat 1 23 0 * 377 39 20 0 chr17 5864116 5864167 -79574313 + (TG)n Simple_repeat Simple_repeat 2 53 0 216 0 0 0 chr17 5864495 5864519 -79573961 + (TG)n Simple_repeat Simple_repeat 2 25 0 22 94 0 0 chr17 5864585 5864649 -79573831 + GC_rich Low_complexity Low_complexity 1 64 0 22 56 0 0 chr17 5864673 5864709 -79573771 + GC_rich Low_complexity Low_complexity 1 36 0 228 75 38 38 chr17 5864731 5864784 -79573696 + (CCCG)n Simple_repeat Simple_repeat 2 54 0 231 245 9 38 chr17 5865155 5865261 -79573219 + G-rich Low_complexity Low_complexity 2 104 0 2087 151 3 6 chr17 5867694 5868006 -79570474 + AluSx SINE Alu 1 311 -1 318 299 19 0 chr17 5868242 5868349 -79570131 + MIR SINE MIR 78 186 -76 310 340 70 19 chr17 5870480 5870695 -79567785 + MIR SINE MIR 29 254 -8 241 286 103 40 chr17 5871243 5871369 -79567111 - L2 LINE L2 -1 3271 3138 2378 98 3 0 chr17 5871443 5871740 -79566740 - AluSc SINE Alu -11 298 1 422 370 65 27 chr17 5872533 5872871 -79565609 - L2 LINE L2 0 3272 2922 288 170 0 0 chr17 5872917 5872970 -79565510 + (TG)n Simple_repeat Simple_repeat 1 53 0 551 291 56 39 chr17 5872982 5873216 -79565264 - L2 LINE L2 -451 2863 2626 604 290 50 23 chr17 5874186 5874407 -79564073 + MIR SINE MIR 13 239 -23 567 264 63 6 chr17 5874466 5874625 -79563855 - MIR SINE MIR -71 191 24 22 42 0 0 chr17 5875310 5875334 -79563146 + GC_rich Low_complexity Low_complexity 1 24 0 2208 107 20 3 chr17 5875804 5876102 -79562378 + AluSx SINE Alu 1 303 -9 692 221 28 17 chr17 5876198 5876379 -79562101 + MER5A DNA MER1_type 2 184 -5 321 197 13 26 chr17 5876495 5876571 -79561909 - MIR SINE MIR -102 160 86 974 208 36 5 chr17 5876574 5876795 -79561685 - LTR16C LTR ERVL -2 489 262 210 353 69 28 chr17 5877097 5877315 -79561165 - L2 LINE L2 -429 2885 2659 281 167 45 30 chr17 5877860 5877926 -79560554 - AluS SINE Alu -237 71 5 897 73 0 9 chr17 5877927 5878036 -79560444 + AluSx SINE Alu 46 153 -159 2277 109 3 0 chr17 5878161 5878465 -79560015 - AluSq SINE Alu -5 308 4 1493 109 37 251 chr17 5878470 5878857 -79559623 + Tigger3(Golem) DNA MER2_type 2497 2679 -350 2376 70 0 10 chr17 5878857 5879157 -79559323 - AluY SINE Alu -14 297 1 1493 109 37 251 chr17 5879157 5879446 -79559034 + Tigger3(Golem) DNA MER2_type 2679 3028 -1 435 309 94 43 chr17 5879508 5879829 -79558651 - L1MDa LINE L1 -3936 2604 2355 1092 215 0 0 chr17 5880087 5880282 -79558198 - MLT1A1 LTR MaLR -2 363 169 333 250 0 0 chr17 5880272 5880340 -79558140 - MLT1A1 LTR MaLR -129 236 169 * 333 250 0 0 chr17 5880330 5880398 -79558082 - MLT1A1 LTR MaLR -129 236 169 * 1314 153 49 5 chr17 5880388 5880611 -79557869 - MLT1A1 LTR MaLR -129 236 4 206 290 138 21 chr17 5880805 5880950 -79557530 - L3 LINE CR1 -108 1469 1308 387 295 12 66 chr17 5881771 5881937 -79556543 + MIR3 SINE MIR 33 189 -19 2634 65 0 0 chr17 5882164 5882471 -79556009 - AluY SINE Alu -4 307 1 237 109 0 43 chr17 5882512 5882558 -79555922 - MIR SINE MIR -102 160 117 315 322 48 7 chr17 5882625 5882771 -79555709 - MIR SINE MIR -99 163 12 435 197 0 0 chr17 5883033 5883109 -79555371 - MER63 DNA MER1_type -84 752 677 593 273 163 22 chr17 5883621 5883984 -79554496 + L2 LINE L2 2899 3312 -1 301 310 56 56 chr17 5884080 5884293 -79554187 + MIR SINE MIR 27 239 -23 683 205 0 18 chr17 5884609 5884775 -79553705 - L1MB5 LINE L1 0 6174 6012 984 181 78 21 chr17 5884790 5885033 -79553447 - L1MD3 LINE L1 -9 7986 7730 499 328 104 27 chr17 5885342 5885717 -79552763 - MLT1I LTR MaLR -1 408 5 2202 107 7 3 chr17 5886089 5886388 -79552092 - AluSc SINE Alu -9 300 1 789 263 109 63 chr17 5886437 5886851 -79551629 + MLT1D LTR MaLR 1 433 -72 254 301 21 11 chr17 5887313 5887406 -79551074 + MIR SINE MIR 30 123 -85 21 0 0 0 chr17 5887643 5887664 -79550816 + AT_rich Low_complexity Low_complexity 1 21 0 2206 119 0 0 chr17 5887747 5888040 -79550440 - AluSx SINE Alu -19 293 1 254 301 42 42 chr17 5888049 5888192 -79550288 + L2 LINE L2 3169 3311 -2 1641 260 47 57 chr17 5888912 5889511 -79548969 - MLT1E LTR MaLR 0 593 1 198 71 0 0 chr17 5890432 5890460 -79548020 + (TC)n Simple_repeat Simple_repeat 1 28 0 1177 130 5 31 chr17 5891581 5891755 -79546725 - AluJb SINE Alu -4 308 138 2140 133 0 3 chr17 5891755 5892049 -79546431 - AluSx SINE Alu -19 293 1 1177 130 5 31 chr17 5892049 5892066 -79546414 - AluJb SINE Alu -174 138 122 321 232 12 49 chr17 5892171 5892253 -79546227 - L1MC4 LINE L1 -1355 6687 6609 441 282 44 92 chr17 5892612 5892735 -79545745 - L1ME LINE L1 -342 5779 5652 2311 97 13 7 chr17 5892735 5893043 -79545437 - AluSg SINE Alu 0 310 1 441 282 44 92 chr17 5893043 5893280 -79545200 - L1ME LINE L1 -469 5652 5434 545 284 38 48 chr17 5894037 5894136 -79544344 - MIR SINE MIR -3 259 160 2185 113 0 13 chr17 5894136 5894437 -79544043 - AluSq SINE Alu -16 297 1 545 284 38 48 chr17 5894437 5894595 -79543885 - MIR SINE MIR -102 160 5 554 319 28 66 chr17 5895092 5895412 -79543068 + L2 LINE L2 2932 3239 -33 1242 109 0 40 chr17 5895421 5895596 -79542884 + AluSx SINE Alu 1 168 -144 493 298 4 8 chr17 5895696 5895931 -79542549 - AluSq SINE Alu -77 236 3 1778 142 0 77 chr17 5896001 5896324 -79542156 - AluSx SINE Alu -12 300 3 356 377 63 6 chr17 5896616 5896791 -79541689 - HAL1 LINE L1 -710 1797 1613 1937 142 48 0 chr17 5897270 5897565 -79540915 + AluSc SINE Alu 1 309 0 211 289 96 0 chr17 5897938 5898021 -79540459 - L2 LINE L2 0 3272 3182 412 266 49 21 chr17 5898031 5898174 -79540306 + MIR3 SINE MIR 4 150 -58 395 237 105 48 chr17 5898226 5898452 -79540028 - MIR SINE MIR -2 260 19 2179 136 0 0 chr17 5898479 5898788 -79539692 - AluSx SINE Alu 0 312 4 323 349 71 0 chr17 5899190 5899316 -79539164 - MIR3 SINE MIR -25 183 49 938 217 4 71 chr17 5899429 5899669 -79538811 - MER58A DNA MER1_type 0 224 1 376 341 82 22 chr17 5899723 5899905 -79538575 + L2 LINE L2 3079 3271 -1 513 182 0 0 chr17 5900252 5900351 -79538129 + (TG)n Simple_repeat Simple_repeat 2 100 0 798 166 0 45 chr17 5900363 5900520 -79537960 + MLT1B LTR MaLR 34 183 -207 747 176 36 24 chr17 5900501 5900666 -79537814 + MLT1B LTR MaLR 298 464 -3 * 2262 88 7 7 chr17 5901468 5901763 -79536717 + AluSg SINE Alu 5 299 -11 733 252 18 91 chr17 5902021 5902295 -79536185 + MIR SINE MIR 9 262 0 303 258 0 0 chr17 5902765 5902831 -79535649 - MIR SINE MIR -65 143 78 364 324 27 60 chr17 5903416 5903601 -79534879 + MIR3 SINE MIR 3 181 -27 268 356 11 0 chr17 5903952 5904039 -79534441 - L2 LINE L2 -64 3208 3121 312 294 117 22 chr17 5904879 5905059 -79533421 - LTR16A1 LTR ERVL -93 364 168 366 80 0 0 chr17 5906159 5906209 -79532271 + (TTCA)n Simple_repeat Simple_repeat 3 52 0 351 271 202 26 chr17 5906240 5906763 -79531717 - L2 LINE L2 -95 3218 2602 387 325 0 4 chr17 5907443 5907679 -79530801 + (CA)n Simple_repeat Simple_repeat 1 234 0 195 42 0 0 chr17 5908232 5908256 -79530224 + (TCCA)n Simple_repeat Simple_repeat 1 24 0 389 317 26 118 chr17 5909156 5909462 -79529018 - L2 LINE L2 -19 3253 2976 330 270 117 55 chr17 5909625 5909953 -79528527 + L1MC5 LINE L1 1958 8032 -209 24 53 0 0 chr17 5909966 5910004 -79528476 + AT_rich Low_complexity Low_complexity 1 38 0 310 293 40 67 chr17 5910445 5910698 -79527782 - L2 LINE L2 -1230 2084 1839 274 215 124 41 chr17 5911436 5911557 -79526923 + MLT1H LTR MaLR 408 538 -11 481 282 28 21 chr17 5912644 5912786 -79525694 + MIR SINE MIR 61 203 -59 235 118 0 0 chr17 5912789 5912823 -79525657 + MLT1L LTR MaLR 4 37 -578 474 279 61 92 chr17 5912866 5912936 -79525544 + MLT1J LTR MaLR 111 182 -329 1824 93 61 83 chr17 5912936 5913248 -79525232 + AluSq SINE Alu 1 305 -8 474 279 61 92 chr17 5913248 5913589 -79524891 + MLT1J LTR MaLR 182 509 -2 2184 119 3 7 chr17 5913707 5914017 -79524463 - AluSg SINE Alu -1 309 1 206 281 0 18 chr17 5914042 5914099 -79524381 - L2 LINE L2 -224 3048 2993 948 239 93 89 chr17 5914983 5915081 -79523399 - MLT1H1 LTR MaLR -10 545 449 2359 113 0 3 chr17 5915081 5915391 -79523089 + AluSq SINE Alu 1 309 -4 948 239 93 89 chr17 5915391 5915867 -79522613 - MLT1H1 LTR MaLR -106 449 1 224 319 43 21 chr17 5917229 5917323 -79521157 + MIR SINE MIR 157 252 -10 610 139 14 36 chr17 5919571 5919857 -79518623 + GA-rich Low_complexity Low_complexity 1 279 0 1080 210 47 0 chr17 5921114 5921328 -79517152 - MIR SINE MIR -12 250 27 205 216 39 0 chr17 5922237 5922288 -79516192 + GA-rich Low_complexity Low_complexity 4 56 0 731 303 138 24 chr17 5922527 5922867 -79515613 - L1MC4a LINE L1 -1908 5900 5522 1990 131 0 67 chr17 5922992 5923320 -79515160 - AluJo SINE Alu -6 306 1 256 189 98 82 chr17 5924164 5924286 -79514194 + LTR9 LTR ERV1 1 124 -488 1958 107 0 36 chr17 5924287 5924595 -79513885 + AluSc SINE Alu 1 297 -12 2242 177 46 13 chr17 5924598 5925056 -79513424 + LTR9B LTR ERV1 170 642 -2 1049 183 48 5 chr17 5925675 5925883 -79512597 - MER20 DNA MER1_type 0 219 3 516 187 90 8 chr17 5926274 5926408 -79512072 + L1ME4a LINE L1 5734 5878 -243 478 247 13 83 chr17 5927849 5928098 -79510382 - L1MC/D LINE L1 -385 5736 5565 386 350 19 31 chr17 5928123 5928283 -79510197 + MIR SINE MIR 28 185 -77 2351 134 39 17 chr17 5929028 5929438 -79509042 - MSTB LTR MaLR 0 426 8 242 272 177 44 chr17 5929439 5929597 -79508883 - MIR3 SINE MIR -27 181 3 684 241 70 10 chr17 5931105 5931304 -79507176 - L2 LINE L2 -222 3091 2881 1914 166 33 14 chr17 5931317 5931594 -79506886 - MLT1B LTR MaLR -16 374 87 2117 117 0 0 chr17 5931594 5931876 -79506604 + AluSx SINE Alu 23 304 -8 1914 166 33 14 chr17 5931876 5931965 -79506515 - MLT1B LTR MaLR -303 87 1 413 257 182 14 chr17 5932951 5933099 -79505381 - MIR SINE MIR -34 228 56 231 286 0 0 chr17 5934984 5935040 -79503440 + MIR SINE MIR 92 147 -61 236 179 0 0 chr17 5935385 5935424 -79503056 - MER5A DNA MER1_type 0 189 151 2333 192 11 45 chr17 5935478 5935771 -79502709 + L1MA5 LINE L1 1356 1621 -5168 2480 95 3 0 chr17 5935771 5936076 -79502404 + AluSq SINE Alu 1 306 -7 2333 192 11 45 chr17 5936076 5936356 -79502124 + L1MA5 LINE L1 1621 1909 -4880 230 217 0 0 chr17 5936356 5936402 -79502078 - L1M2c LINE L1 -4844 1945 1900 * 995 168 20 0 chr17 5936400 5936603 -79501877 + L1MA5 LINE L1 3600 3806 -2982 * 7454 130 22 36 chr17 5936583 5939017 -79499463 + L1MA5 LINE L1 4552 6940 -2 25 23 0 23 chr17 5939017 5939035 -79499445 + AT_rich Low_complexity Low_complexity 1 18 -24 2637 80 0 8 chr17 5939035 5939398 -79499082 - L1PA8 LINE L1 0 6172 5813 25 23 0 23 chr17 5939398 5939422 -79499058 + AT_rich Low_complexity Low_complexity 18 42 0 550 205 17 8 chr17 5939437 5939554 -79498926 - MER5A DNA MER1_type -63 126 9 2090 131 3 31 chr17 5939941 5940262 -79498218 - AluSx SINE Alu 0 312 1 213 39 0 0 chr17 5940769 5940795 -79497685 + (CA)n Simple_repeat Simple_repeat 1 26 0 280 298 177 56 chr17 5941308 5941523 -79496957 + L2 LINE L2 3029 3269 -3 267 247 26 26 chr17 5941880 5941957 -79496523 + MIR SINE MIR 56 132 -130 1547 204 34 55 chr17 5943206 5943588 -79494892 - MLT1A2 LTR MaLR 0 374 1 202 360 45 0 chr17 5943743 5943854 -79494626 - L2 LINE L2 -2 3270 3155 290 319 18 26 chr17 5944083 5944196 -79494284 + MIR SINE MIR 37 148 -114 227 245 138 21 chr17 5948325 5948419 -79490061 + MIR SINE MIR 49 153 -55 742 329 40 40 chr17 5948514 5948943 -79489537 + MLT1K LTR MaLR 138 566 -22 190 286 71 14 chr17 5949217 5949287 -79489193 - MIR SINE MIR -70 192 119 842 145 0 0 chr17 5949530 5949749 -79488731 - FLAM_C SINE Alu 0 219 1 403 310 103 17 chr17 5949755 5949797 -79488683 - MIR SINE MIR -56 206 169 1134 242 102 50 chr17 5949797 5950277 -79488203 + MLT1D LTR MaLR 1 505 0 403 310 103 17 chr17 5950277 5950408 -79488072 - MIR SINE MIR -93 169 18 686 296 4 48 chr17 5950440 5950670 -79487810 + MIR SINE MIR 33 252 -10 817 216 64 5 chr17 5950752 5950956 -79487524 - MER20 DNA MER1_type 0 219 4 329 340 31 13 chr17 5951187 5951211 -79487269 + MIR SINE MIR 100 122 -140 6489 60 33 1 chr17 5951211 5952137 -79486343 + L1PA8 LINE L1 5218 6171 -1 329 340 31 13 chr17 5952137 5952271 -79486209 + MIR SINE MIR 122 261 -1 299 250 9 56 chr17 5952745 5952853 -79485627 + MIR SINE MIR 20 122 -86 4531 58 15 5 chr17 5953227 5953835 -79484645 - L1PA7 LINE L1 -1 6153 5540 345 319 26 0 chr17 5953883 5953990 -79484490 - MIR SINE MIR -77 185 76 248 227 0 113 chr17 5953990 5954087 -79484393 + MER91B DNA MER1_type 1 86 -104 1655 205 43 57 chr17 5954569 5955076 -79483404 - MLT1D LTR MaLR -3 502 3 1968 130 3 7 chr17 5955791 5956075 -79482405 + AluSq SINE Alu 1 283 -30 243 0 0 0 chr17 5956078 5956105 -79482375 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 241 294 17 84 chr17 5957420 5957539 -79480941 + MIR SINE MIR 46 156 -106 23 0 0 0 chr17 5958299 5958322 -79480158 + AT_rich Low_complexity Low_complexity 1 23 0 338 231 0 13 chr17 5958337 5958415 -79480065 + MIR3 SINE MIR 115 191 -17 2082 126 3 10 chr17 5958581 5958882 -79479598 + AluSx SINE Alu 1 299 -13 334 210 6 160 chr17 5960197 5960378 -79478102 + HAL1b LINE L1 1185 1337 -11 488 293 11 42 chr17 5961361 5961552 -79476928 - MIR SINE MIR -6 256 72 303 272 0 43 chr17 5961792 5961884 -79476596 - MLT1H LTR MaLR -415 134 47 187 299 72 31 chr17 5962588 5962685 -79475795 + MIR3 SINE MIR 105 205 -3 300 264 230 40 chr17 5963038 5963103 -79475377 + MER5A DNA MER1_type 13 64 -125 2103 121 10 20 chr17 5963103 5963408 -79475072 + AluSx SINE Alu 1 302 -10 300 264 230 40 chr17 5963408 5963490 -79474990 + MER5A DNA MER1_type 64 188 -1 318 268 91 81 chr17 5963493 5963691 -79474789 + LTR16C LTR ERVL 2 201 -290 2195 201 82 46 chr17 5963691 5964254 -79474226 - MER119 DNA MER1_type 0 583 1 497 258 129 17 chr17 5964279 5964519 -79473961 + LTR16C LTR ERVL 222 488 -3 189 291 103 0 chr17 5964547 5964664 -79473816 - L2 LINE L2 -673 2641 2513 239 324 67 9 chr17 5965276 5965381 -79473099 - MIR SINE MIR -70 192 82 * 261 293 204 16 chr17 5965365 5965488 -79472992 - L2 LINE L2 -4 3309 3210 1571 111 134 0 chr17 5965488 5965750 -79472730 + AluY SINE Alu 1 297 -4 261 293 204 16 chr17 5965750 5965817 -79472663 - L2 LINE L2 -103 3210 3083 1848 244 42 33 chr17 5967225 5967747 -79470733 - MER74B LTR ERVL -58 564 35 2583 84 5 22 chr17 5967747 5968117 -79470363 - THE1B LTR MaLR 0 364 1 1848 244 42 33 chr17 5968117 5968144 -79470336 - MER74B LTR ERVL -587 35 10 511 308 27 0 chr17 5968148 5968333 -79470147 + L2 LINE L2 2867 3056 -257 369 298 169 35 chr17 5968583 5969120 -79469360 + L2 LINE L2 2172 2780 -534 215 61 30 0 chr17 5970012 5970045 -79468435 + (TC)n Simple_repeat Simple_repeat 2 35 0 359 303 35 14 chr17 5970597 5970739 -79467741 - L3 LINE CR1 -86 1491 1347 556 296 38 32 chr17 5970884 5971070 -79467410 - MIR SINE MIR -3 259 73 196 354 53 18 chr17 5971242 5971355 -79467125 + L2 LINE L2 3122 3238 -34 301 317 57 16 chr17 5971519 5971642 -79466838 + MIR3 SINE MIR 6 133 -75 358 233 25 42 chr17 5972102 5972222 -79466258 + L2 LINE L2 1371 1488 -1826 186 282 39 39 chr17 5972576 5972654 -79465826 - MIR SINE MIR -103 105 28 723 263 59 0 chr17 5972943 5973129 -79465351 + MLT1F LTR MaLR 9 205 -337 602 113 0 120 chr17 5973129 5973262 -79465218 - SVA Other Other -406 980 864 280 274 0 36 chr17 5973270 5973354 -79465126 + MLT1F LTR MaLR 216 296 -246 1234 209 25 53 chr17 5973354 5973425 -79465055 - MLT1A1 LTR MaLR 0 365 294 1453 180 3 25 chr17 5973425 5973741 -79464739 + AluSq SINE Alu 2 310 -3 1234 209 25 53 chr17 5973741 5973990 -79464490 - MLT1A1 LTR MaLR -71 294 54 841 166 140 47 chr17 5974204 5974439 -79464041 + MLT1F LTR MaLR 286 542 0 193 253 0 27 chr17 5975512 5975587 -79462893 + L2 LINE L2 3015 3087 -185 229 216 57 45 chr17 5976118 5976206 -79462274 + L3 LINE CR1 575 663 -914 546 303 88 43 chr17 5977437 5977481 -79460999 - L1ME4a LINE L1 -233 5888 5847 2257 102 3 10 chr17 5977481 5977784 -79460696 + AluY SINE Alu 1 301 -10 546 303 88 43 chr17 5977784 5978205 -79460275 - L1ME4a LINE L1 -274 5847 5402 1133 187 20 24 chr17 5978289 5978535 -79459945 - L1PB4 LINE L1 -2 6154 5910 419 182 11 0 chr17 5978535 5978623 -79459857 + L1PB4 LINE L1 5762 5850 -306 2333 113 0 0 chr17 5978644 5978953 -79459527 - AluSg SINE Alu -1 309 1 3498 152 7 8 chr17 5979013 5979627 -79458853 - L1PA16 LINE L1 0 6166 5554 512 209 0 22 chr17 5979629 5979763 -79458717 + L1 LINE L1 3209 3339 -2807 5788 174 17 42 chr17 5979869 5981344 -79457136 + L1P4 LINE L1 3994 5429 -737 1609 141 0 72 chr17 5981344 5981667 -79456813 + AluSx SINE Alu 31 312 0 5788 174 17 42 chr17 5981667 5981729 -79456751 + L1P4 LINE L1 5429 5491 -675 341 267 14 62 chr17 5982279 5982425 -79456055 - LTR33 LTR ERVL -28 493 355 1474 216 92 77 chr17 5982425 5982903 -79455577 + MLT1E LTR MaLR 1 485 -108 210 108 0 54 chr17 5982917 5982932 -79455548 + (GAAAA)n Simple_repeat Simple_repeat 2 16 -20 2013 113 0 31 chr17 5982932 5983252 -79455228 + AluSg SINE Alu 1 310 0 210 108 0 54 chr17 5983252 5983273 -79455207 + (GAAAA)n Simple_repeat Simple_repeat 16 36 0 1342 185 122 24 chr17 5983771 5984100 -79454380 + MLT1A1 LTR MaLR 5 365 0 200 318 15 0 chr17 5984227 5984293 -79454187 - MIR3 SINE MIR -38 170 104 198 71 0 0 chr17 5984645 5984673 -79453807 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 349 274 82 30 chr17 5985282 5985417 -79453063 + MIR3 SINE MIR 67 208 0 2056 156 0 13 chr17 5985431 5985739 -79452741 + AluJb SINE Alu 1 304 -8 2386 79 0 0 chr17 5985816 5986120 -79452360 - AluY SINE Alu -7 304 1 26 64 0 0 chr17 5986300 5986347 -79452133 + AT_rich Low_complexity Low_complexity 1 47 0 418 294 121 22 chr17 5986727 5986958 -79451522 + MIR SINE MIR 5 258 -4 402 57 0 0 chr17 5986995 5987048 -79451432 + (TCCA)n Simple_repeat Simple_repeat 1 53 0 208 344 32 43 chr17 5987052 5987145 -79451335 - L2 LINE L2 -16 3297 3206 320 247 26 0 chr17 5987505 5987582 -79450898 + MIR SINE MIR 163 241 -21 2399 98 0 0 chr17 5988027 5988322 -79450158 + AluSg SINE Alu 1 295 -15 809 171 0 0 chr17 5989470 5989587 -79448893 + FLAM_C SINE Alu 1 117 -26 712 57 29 0 chr17 5989587 5989692 -79448788 + (GAAA)n Simple_repeat Simple_repeat 3 110 0 873 272 62 49 chr17 5989942 5990310 -79448170 + MLT1H LTR MaLR 29 401 -148 486 228 0 0 chr17 5991005 5991163 -79447317 + (ATG)n Simple_repeat Simple_repeat 1 158 0 252 100 0 0 chr17 5991171 5991211 -79447269 + (ATGGTG)n Simple_repeat Simple_repeat 1 40 0 345 367 82 46 chr17 5991307 5991699 -79446781 + L2 LINE L2 2866 3271 -1 222 37 0 0 chr17 5992306 5992333 -79446147 + (CA)n Simple_repeat Simple_repeat 2 28 0 488 303 51 28 chr17 5992742 5992920 -79445560 - MIR SINE MIR -12 250 69 702 275 57 50 chr17 5993420 5993989 -79444491 - L1M4 LINE L1 -2837 3309 2733 326 283 20 30 chr17 5994107 5994206 -79444274 - L1M4 LINE L1 -3600 2546 2449 3428 133 8 10 chr17 5994277 5994789 -79443691 + Tigger3b DNA MER2_type 1 511 -720 225 250 0 36 chr17 5995063 5995147 -79443333 + (TA)n Simple_repeat Simple_repeat 2 82 0 1679 106 0 8 chr17 5995186 5995422 -79443058 + AluSg SINE Alu 61 294 -16 2170 110 7 0 chr17 5995614 5995924 -79442556 - AluSx SINE Alu 0 312 1 1901 143 0 3 chr17 5997266 5997566 -79440914 + AluSc SINE Alu 1 299 -10 292 281 238 5 chr17 5998113 5998298 -79440182 - L3 LINE CR1 -89 1488 1261 2167 97 20 0 chr17 5998665 5998964 -79439516 + AluSg SINE Alu 1 305 -5 25 0 0 0 chr17 5999214 5999239 -79439241 + AT_rich Low_complexity Low_complexity 1 25 0 389 323 41 66 chr17 6000032 6000370 -79438110 + L1MEc LINE L1 2140 2428 -3787 563 316 36 0 chr17 6000430 6000598 -79437882 - MIR SINE MIR 0 262 89 770 186 11 57 chr17 6001753 6001930 -79436550 + MER5B DNA MER1_type 1 169 -9 183 220 51 51 chr17 6002379 6002438 -79436042 + L2 LINE L2 3160 3218 -54 651 310 56 19 chr17 6002841 6003109 -79435371 + L1ME1 LINE L1 5885 6162 -4 536 285 18 18 chr17 6003278 6003443 -79435037 + MER90 LTR ERV1 445 609 -5 209 269 0 0 chr17 6004265 6004317 -79434163 + (CA)n Simple_repeat Simple_repeat 2 53 0 334 236 73 41 chr17 6004572 6004695 -79433785 + L2 LINE L2 2964 3090 -182 1059 260 69 53 chr17 6004746 6005181 -79433299 - MLT1J LTR MaLR 0 511 70 1933 118 17 10 chr17 6005192 6005488 -79432992 + AluSq SINE Alu 1 298 -15 399 194 0 58 chr17 6005881 6005984 -79432496 + LTR67 LTR ERVL 458 554 -3 701 151 8 0 chr17 6006044 6006163 -79432317 - L1MA4 LINE L1 -6 6294 6175 1772 134 0 7 chr17 6006521 6006840 -79431640 + AluSc SINE Alu 1 317 0 2578 211 25 13 chr17 6007676 6007705 -79430775 + MER68 LTR ERV1 1 28 -534 1677 135 4 4 chr17 6007705 6008007 -79430473 - AluSq SINE Alu 0 319 18 2578 211 25 13 chr17 6008007 6008531 -79429949 + MER68 LTR ERV1 28 562 0 640 167 0 0 chr17 6009068 6009170 -79429310 + U6 snRNA snRNA 1 102 -5 2335 62 0 0 chr17 6009170 6009462 -79429018 - AluY SINE Alu -19 292 1 464 150 40 30 chr17 6009480 6009580 -79428900 + L1MA6 LINE L1 6200 6300 0 375 252 84 15 chr17 6009678 6009809 -79428671 - MIR SINE MIR -115 147 8 2003 127 17 0 chr17 6010370 6010670 -79427810 + AluSg SINE Alu 1 305 -5 375 23 0 0 chr17 6010687 6010731 -79427749 + (GGA)n Simple_repeat Simple_repeat 1 44 0 360 321 63 70 chr17 6011041 6011328 -79427152 - L1 LINE L1 -853 5293 5009 900 315 195 25 chr17 6011366 6012059 -79426421 + L2 LINE L2 2149 2959 -355 439 82 0 0 chr17 6012084 6012145 -79426335 - AluSp/q SINE Alu -13 300 240 916 106 15 0 chr17 6012344 6012476 -79426004 + AluY SINE Alu 1 134 -177 2137 92 7 3 chr17 6012476 6012770 -79425710 + AluSc SINE Alu 1 295 -14 2277 101 0 0 chr17 6013124 6013431 -79425049 + AluSq SINE Alu 1 307 -6 4527 274 90 26 chr17 6013438 6015613 -79422867 + L1 LINE L1 2663 4977 -1169 1068 181 24 52 chr17 6015615 6015825 -79422655 + MLT1A2 LTR MaLR 11 214 -160 665 220 0 8 chr17 6015841 6015973 -79422507 + L1MD2 LINE L1 722 852 -5557 * 929 69 0 0 chr17 6015967 6016083 -79422397 - L1PA5 LINE L1 -167 5987 5872 1281 55 0 0 chr17 6016083 6016242 -79422238 + L1PA5 LINE L1 5992 6154 0 261 0 0 0 chr17 6016248 6016277 -79422203 + (TA)n Simple_repeat Simple_repeat 2 30 0 1511 202 15 3 chr17 6016277 6016599 -79421881 + L1MD2 LINE L1 841 1166 -5243 1259 190 106 44 chr17 6016643 6016829 -79421651 + L1MD2 LINE L1 3099 3272 -3134 2266 89 7 0 chr17 6016829 6017133 -79421347 + AluSc SINE Alu 1 306 -3 1259 190 106 44 chr17 6017133 6017382 -79421098 + L1MD2 LINE L1 3272 3561 -2845 711 147 66 22 chr17 6017384 6017520 -79420960 + FLAM_C SINE Alu 2 143 0 2104 239 37 31 chr17 6017520 6017681 -79420799 + L1MD2 LINE L1 3953 4112 -2294 1646 165 44 7 chr17 6017681 6017978 -79420502 + AluJb SINE Alu 1 308 -4 2104 239 37 31 chr17 6017978 6018468 -79420012 + L1MD2 LINE L1 4112 4608 -1798 903 54 0 0 chr17 6018468 6018580 -79419900 + AluSg/x SINE Alu 189 300 -12 7379 49 10 12 chr17 6018617 6020080 -79418400 + SVA Other Other 3 1383 -3 25 0 0 0 chr17 6020116 6020141 -79418339 + AT_rich Low_complexity Low_complexity 1 25 0 491 239 99 52 chr17 6020335 6020678 -79417802 + L1MC5 LINE L1 7389 7747 -214 2987 215 35 48 chr17 6020692 6021053 -79417427 + L1MD2 LINE L1 4602 4966 -1653 1835 98 77 21 chr17 6021053 6021339 -79417141 + AluY SINE Alu 1 302 -9 2987 215 35 48 chr17 6021339 6021620 -79416860 + L1MD2 LINE L1 4966 5249 -1370 2351 75 3 0 chr17 6021620 6021925 -79416555 - AluSp SINE Alu -7 306 1 2987 215 35 48 chr17 6021925 6022781 -79415699 + L1MD2 LINE L1 5249 6086 -533 1119 143 0 0 chr17 6022782 6022950 -79415530 + AluSg/x SINE Alu 134 301 -11 733 112 96 24 chr17 6022960 6023085 -79415395 + FLAM_C SINE Alu 8 141 -2 2090 120 0 0 chr17 6023085 6023377 -79415103 + AluSx SINE Alu 1 292 -20 1791 234 22 18 chr17 6023397 6023855 -79414625 + L1MD2 LINE L1 6071 6530 -89 418 138 25 0 chr17 6023908 6023988 -79414492 + L1MD2 LINE L1 6537 6618 -1 1961 142 0 13 chr17 6023998 6024300 -79414180 + AluSq SINE Alu 1 298 -15 234 258 16 0 chr17 6024344 6024406 -79414074 + (TGAA)n Simple_repeat Simple_repeat 3 65 0 1145 139 0 0 chr17 6024428 6024594 -79413886 + AluJo SINE Alu 1 166 -146 202 271 0 0 chr17 6025086 6025134 -79413346 + MIR SINE MIR 194 241 -21 341 245 0 60 chr17 6026379 6026683 -79411797 + (CA)n Simple_repeat Simple_repeat 1 285 0 288 0 0 0 chr17 6026699 6026731 -79411749 + (CA)n Simple_repeat Simple_repeat 2 33 0 1719 173 10 0 chr17 6027422 6027728 -79410752 - AluJb SINE Alu -3 309 1 1769 104 4 0 chr17 6028085 6028326 -79410154 + AluSx SINE Alu 27 268 -44 374 339 93 32 chr17 6028468 6028608 -79409872 - L1MC/D LINE L1 -747 5399 5269 1425 25 0 0 chr17 6028608 6028771 -79409709 + L1PA5 LINE L1 5987 6149 -5 374 339 93 32 chr17 6028771 6029178 -79409302 - L1MC/D LINE L1 -877 5269 4890 2404 51 0 3 chr17 6029437 6029733 -79408747 + AluY SINE Alu 1 295 -16 337 307 195 15 chr17 6029746 6030013 -79408467 - L1MC/D LINE L1 -1722 4424 4110 1915 133 6 38 chr17 6030067 6030382 -79408098 - AluSq SINE Alu -8 305 1 228 244 0 0 chr17 6030666 6030707 -79407773 - MIR SINE MIR -132 76 36 906 9 0 0 chr17 6030956 6031064 -79407416 + AluY SINE Alu 203 310 -1 443 283 45 71 chr17 6031571 6031734 -79406746 - MIR SINE MIR -69 193 34 2191 98 0 0 chr17 6031734 6032029 -79406451 - AluSx SINE Alu -17 295 1 443 283 45 71 chr17 6032029 6032063 -79406417 - MIR SINE MIR -228 34 1 2251 70 10 3 chr17 6032661 6032962 -79405518 - AluSq SINE Alu -10 303 1 378 297 27 27 chr17 6032973 6033158 -79405322 + L2 LINE L2 1705 1889 -1425 917 245 71 40 chr17 6033160 6033511 -79404969 + MER92A LTR ERV1 1 362 -50 511 297 221 26 chr17 6033526 6034636 -79403844 + L2 LINE L2 1888 3218 -95 381 93 0 0 chr17 6034666 6034720 -79403760 + (TGAA)n Simple_repeat Simple_repeat 3 56 0 327 294 117 22 chr17 6035817 6035997 -79402483 + LTR16A1 LTR ERVL 168 364 -93 266 356 11 0 chr17 6036830 6036917 -79401563 + L2 LINE L2 3121 3208 -64 393 304 31 58 chr17 6037259 6037450 -79401030 - MIR3 SINE MIR -20 188 3 296 258 0 0 chr17 6038034 6038100 -79400380 + MIR SINE MIR 78 143 -65 736 248 18 91 chr17 6038558 6038832 -79399648 - MIR SINE MIR 0 262 9 2198 88 7 0 chr17 6039089 6039383 -79399097 - AluSg SINE Alu -10 300 5 813 199 30 6 chr17 6040178 6040344 -79398136 - MLT1B LTR MaLR 0 467 298 * 849 153 12 43 chr17 6040319 6040482 -79397998 - MLT1B LTR MaLR -199 191 34 513 182 0 0 chr17 6040494 6040593 -79397887 + (CA)n Simple_repeat Simple_repeat 2 100 0 387 343 69 23 chr17 6040939 6041114 -79397366 - L2 LINE L2 -1 3271 3089 914 217 4 71 chr17 6041177 6041417 -79397063 + MER58A DNA MER1_type 1 224 0 319 349 71 0 chr17 6041530 6041656 -79396824 + MIR3 SINE MIR 49 183 -25 2031 136 0 0 chr17 6042055 6042364 -79396116 + AluSx SINE Alu 4 312 0 389 235 105 45 chr17 6042391 6042616 -79395864 + MIR SINE MIR 19 260 -2 407 266 49 21 chr17 6042668 6042811 -79395669 - MIR3 SINE MIR -58 150 4 209 289 96 0 chr17 6042821 6042904 -79395576 + L2 LINE L2 3182 3272 0 231 103 0 0 chr17 6043274 6043313 -79395167 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 1779 122 0 0 chr17 6043314 6043568 -79394912 - AluSc SINE Alu -55 254 1 364 391 39 6 chr17 6044047 6044226 -79394254 + HAL1 LINE L1 1613 1797 -710 1987 118 0 77 chr17 6044510 6044833 -79393647 + AluSx SINE Alu 3 300 -12 402 296 68 46 chr17 6044851 6044901 -79393579 + L1ME LINE L1 5267 5314 -807 2346 98 0 3 chr17 6044901 6045198 -79393282 + AluSx SINE Alu 1 296 -16 2478 65 7 3 chr17 6045200 6045507 -79392973 + AluY SINE Alu 1 308 -3 402 296 68 46 chr17 6045507 6045786 -79392694 + L1ME LINE L1 5314 5603 -518 3907 128 32 8 chr17 6046076 6046691 -79391789 + L1PA16 LINE L1 5533 6162 -4 760 274 91 11 chr17 6046850 6047223 -79391257 + LTR33A LTR ERVL 121 523 0 349 292 289 0 chr17 6047223 6047535 -79390945 - L2 LINE L2 -517 2797 2396 252 0 0 0 chr17 6047540 6047568 -79390912 + (TTTTG)n Simple_repeat Simple_repeat 4 31 0 1771 118 4 4 chr17 6047614 6047859 -79390621 - AluSq SINE Alu -11 302 58 309 318 20 47 chr17 6048717 6048865 -79389615 + MIR SINE MIR 63 206 -56 2328 96 23 0 chr17 6049587 6049890 -79388590 + AluSg SINE Alu 1 310 0 221 283 283 26 chr17 6050002 6050193 -79388287 - MIR SINE MIR -1 261 22 306 0 0 0 chr17 6050931 6050965 -79387515 + (TG)n Simple_repeat Simple_repeat 2 35 0 201 143 0 0 chr17 6050966 6051001 -79387479 + (GA)n Simple_repeat Simple_repeat 2 36 0 308 253 76 0 chr17 6051040 6051119 -79387361 + L2 LINE L2 3152 3236 -36 407 257 53 9 chr17 6051197 6051310 -79387170 + L2 LINE L2 3188 3305 -8 277 320 155 39 chr17 6051365 6051705 -79386775 + L3 LINE CR1 1116 1508 -69 1050 154 64 86 chr17 6051705 6051850 -79386630 + MER30 DNA MER1_type 2 142 -88 2267 90 0 23 chr17 6051850 6052150 -79386330 + AluSg SINE Alu 1 293 -17 1050 154 64 86 chr17 6052150 6052237 -79386243 + MER30 DNA MER1_type 142 229 -1 277 320 155 39 chr17 6052237 6052284 -79386196 + L3 LINE CR1 1508 1548 -29 2338 96 0 0 chr17 6052731 6053023 -79385457 + AluSg SINE Alu 1 292 -18 593 279 11 34 chr17 6053221 6053400 -79385080 + MIR SINE MIR 29 203 -59 1173 282 95 36 chr17 6053974 6054502 -79383978 + L2 LINE L2 2222 2780 -534 1846 42 0 30 chr17 6054865 6055102 -79383378 + L1PA5 LINE L1 5925 6154 0 208 299 72 0 chr17 6055110 6055207 -79383273 + L2 LINE L2 2766 2869 -445 578 175 0 10 chr17 6055888 6055991 -79382489 + MLT1C LTR MaLR 1 102 -365 2239 88 0 7 chr17 6055992 6056275 -79382205 - AluSc SINE Alu -8 301 21 254 200 0 0 chr17 6056277 6056332 -79382148 - L1MC4 LINE L1 -540 7502 7448 1844 165 8 58 chr17 6056348 6056741 -79381739 + MLT1C LTR MaLR 95 467 0 2469 245 120 20 chr17 6056741 6057912 -79380568 + L1MC4 LINE L1 6482 7713 -95 331 269 0 119 chr17 6057999 6058053 -79380427 - MER5A DNA MER1_type -63 126 96 2376 116 0 0 chr17 6058053 6058363 -79380117 + AluSx SINE Alu 1 310 -2 331 269 0 119 chr17 6058363 6058442 -79380038 - MER5A DNA MER1_type -93 96 9 450 275 76 18 chr17 6058456 6058627 -79379853 + L2 LINE L2 2880 3060 -253 2122 190 47 19 chr17 6058687 6059156 -79379324 - MLT1D LTR MaLR -2 503 22 277 257 67 12 chr17 6059258 6059383 -79379097 + MIR SINE MIR 60 191 -65 184 379 29 19 chr17 6060216 6060319 -79378161 - L2 LINE L2 -19 3294 3191 859 72 7 7 chr17 6060522 6060660 -79377820 + (CA)n Simple_repeat Simple_repeat 2 139 0 3518 148 2 29 chr17 6060673 6060724 -79377756 - L1PA15 LINE L1 0 6165 6114 275 0 0 28 chr17 6060724 6060760 -79377720 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 1987 83 0 0 chr17 6060760 6061000 -79377480 - AluSg SINE Alu -31 279 40 3518 148 2 29 chr17 6061000 6061537 -79376943 - L1PA15 LINE L1 -49 6116 5592 2230 101 14 0 chr17 6061685 6061973 -79376507 - AluSc SINE Alu -17 292 1 327 312 71 51 chr17 6062868 6063020 -79375460 + L2 LINE L2 2812 2972 -300 420 20 0 0 chr17 6063020 6063069 -79375411 + (CA)n Simple_repeat Simple_repeat 1 49 0 327 312 71 51 chr17 6063069 6063169 -79375311 + L2 LINE L2 2972 3069 -203 2381 116 0 0 chr17 6063810 6064120 -79374360 + AluSg SINE Alu 1 310 0 2092 104 50 0 chr17 6064650 6064929 -79373551 - AluSq SINE Alu -6 307 15 190 226 0 94 chr17 6065721 6065774 -79372706 - L2 LINE L2 -86 3227 3180 3078 103 53 0 chr17 6065783 6066218 -79372262 + LTR22A LTR ERVK 1 458 0 305 302 133 46 chr17 6066560 6066724 -79371756 + MIR SINE MIR 31 211 -51 1011 191 3 6 chr17 6067306 6067619 -79370861 + (CAT)n Simple_repeat Simple_repeat 2 313 0 541 315 24 33 chr17 6067621 6067834 -79370646 - MIR SINE MIR -1 261 51 2162 108 24 0 chr17 6068093 6068380 -79370100 + AluSg SINE Alu 1 294 -16 365 297 18 0 chr17 6068716 6068827 -79369653 + MIR3 SINE MIR 82 194 -14 2117 125 0 0 chr17 6069242 6069585 -79368895 + AluSg SINE Alu 1 343 0 297 257 28 55 chr17 6069739 6069848 -79368632 + MIR SINE MIR 74 179 -83 596 299 17 17 chr17 6070029 6070203 -79368277 + MIR SINE MIR 41 214 -48 2322 93 14 0 chr17 6070973 6071264 -79367216 - AluSx SINE Alu -17 295 1 627 284 65 20 chr17 6071685 6072040 -79366440 - L1ME3 LINE L1 -277 5885 5515 426 254 27 9 chr17 6072046 6072156 -79366324 - MIR SINE MIR -61 147 36 2139 119 3 7 chr17 6073047 6073357 -79365123 - AluSc SINE Alu 0 309 1 233 361 25 25 chr17 6073358 6073405 -79365075 + L2 LINE L2 3149 3195 -77 253 231 31 0 chr17 6073405 6073470 -79365010 + MIR SINE MIR 193 259 -3 446 299 148 31 chr17 6073855 6074055 -79364425 - MLT1I LTR MaLR 0 409 163 2657 194 56 6 chr17 6074055 6074595 -79363885 + MLT1F1 LTR MaLR 1 567 0 446 299 148 31 chr17 6074595 6074685 -79363795 - MLT1I LTR MaLR -246 163 85 187 283 0 19 chr17 6074825 6074878 -79363602 + L2 LINE L2 2701 2752 -562 187 307 202 23 chr17 6074890 6075108 -79363372 + L2 LINE L2 3016 3272 0 324 161 0 0 chr17 6075111 6075173 -79363307 + (TGGA)n Simple_repeat Simple_repeat 1 62 0 259 282 94 8 chr17 6076083 6076102 -79362378 - MIR SINE MIR -71 191 175 2252 101 0 28 chr17 6076102 6076383 -79362097 + AluY SINE Alu 1 274 -37 218 0 95 0 chr17 6076383 6076425 -79362055 + A-rich Low_complexity Low_complexity 1 46 0 2252 101 0 28 chr17 6076425 6076461 -79362019 + AluY SINE Alu 274 309 -2 259 282 94 8 chr17 6076461 6076558 -79361922 - MIR SINE MIR -87 175 65 482 285 26 65 chr17 6076565 6076781 -79361699 - MIR3 SINE MIR -51 211 3 2724 93 132 5 chr17 6076943 6077374 -79361106 - LTR19A LTR ERV1 0 486 1 642 272 132 55 chr17 6078257 6078800 -79359680 - MLT1H LTR MaLR -3 552 1 611 261 64 80 chr17 6079905 6080154 -79358326 + MIR SINE MIR 2 246 -16 425 268 8 24 chr17 6080202 6080325 -79358155 - MIR SINE MIR -140 122 2 490 257 56 0 chr17 6080332 6080476 -79358004 + MIR SINE MIR 84 235 -27 732 260 28 0 chr17 6080495 6080676 -79357804 + MIR SINE MIR 63 248 -14 2373 89 7 3 chr17 6080738 6081040 -79357440 - AluSx SINE Alu -9 303 1 2324 117 0 3 chr17 6081430 6081737 -79356743 - AluSq SINE Alu -7 306 1 482 297 57 38 chr17 6082063 6082275 -79356205 - MIR SINE MIR 0 262 47 726 184 207 0 chr17 6082302 6082476 -79356004 + MIR SINE MIR 21 230 -32 679 144 18 0 chr17 6082602 6082713 -79355767 + MER5A DNA MER1_type 6 118 -71 1528 213 23 35 chr17 6082713 6082869 -79355611 + MLT1A1 LTR MaLR 1 157 -208 2467 84 0 0 chr17 6082869 6083166 -79355314 + AluSq SINE Alu 1 297 -16 1528 213 23 35 chr17 6083166 6083357 -79355123 + MLT1A1 LTR MaLR 157 344 -21 240 329 0 0 chr17 6083370 6083440 -79355040 + MER5A DNA MER1_type 120 189 0 407 357 55 6 chr17 6083456 6083638 -79354842 + MIR SINE MIR 22 212 -50 206 276 35 0 chr17 6084539 6084597 -79353883 - L3 LINE CR1 -127 1450 1391 625 206 103 7 chr17 6084601 6084747 -79353733 + MER45A DNA AcHobo 16 175 -3 752 267 6 0 chr17 6084880 6085045 -79353435 - MER96 DNA MER1_type? 0 175 10 316 217 0 0 chr17 6085257 6085317 -79353163 + MER5A DNA MER1_type 21 80 -109 2118 162 28 0 chr17 6085324 6085683 -79352797 - L1MB1 LINE L1 -356 5812 5444 351 209 0 0 chr17 6085678 6085745 -79352735 + L1MB1 LINE L1 5839 5905 -263 * 1241 143 10 0 chr17 6085746 6085955 -79352525 + MER2 DNA MER2_type 1 211 -134 225 137 20 20 chr17 6085956 6086007 -79352473 + (TATTG)n Simple_repeat Simple_repeat 3 53 0 1080 175 10 0 chr17 6086083 6086283 -79352197 + L1MB1 LINE L1 5905 6106 -62 1262 131 11 0 chr17 6086294 6086477 -79352003 + AluSg/x SINE Alu 120 304 -8 269 136 0 0 chr17 6086477 6086521 -79351959 + L1MB1 LINE L1 6124 6167 -1 340 221 0 63 chr17 6086540 6086635 -79351845 + MER5A DNA MER1_type 61 149 -40 4155 193 38 10 chr17 6086892 6088048 -79350432 + L1MB4 LINE L1 4944 6135 -45 2022 107 3 40 chr17 6088064 6088364 -79350116 + AluSp SINE Alu 1 289 -24 186 351 39 0 chr17 6088519 6088596 -79349884 - MIR3 SINE MIR -17 191 112 554 239 42 24 chr17 6088876 6089034 -79349446 + MIR3 SINE MIR 34 197 -54 25 0 0 0 chr17 6089034 6089059 -79349421 + AT_rich Low_complexity Low_complexity 1 25 0 333 0 0 0 chr17 6089215 6089252 -79349228 + (TG)n Simple_repeat Simple_repeat 2 38 0 525 288 36 7 chr17 6089340 6089479 -79349001 - MIR SINE MIR -95 167 25 1212 117 0 103 chr17 6089687 6089900 -79348580 + AluSx SINE Alu 1 191 -121 347 85 0 0 chr17 6089904 6089951 -79348529 + AluSc SINE Alu 61 107 -192 1488 113 0 5 chr17 6090006 6090201 -79348279 + AluSg/x SINE Alu 108 301 -11 1529 257 36 5 chr17 6090447 6090859 -79347621 + LTR16A LTR ERVL 26 450 0 1059 238 141 35 chr17 6091597 6092050 -79346430 - MLT1D LTR MaLR -4 501 1 403 297 27 0 chr17 6092324 6092435 -79346045 - MER81 DNA DNA 0 114 1 1103 190 100 35 chr17 6092729 6092883 -79345597 - MLT1C LTR MaLR -2 465 323 2069 116 71 100 chr17 6092883 6093322 -79345158 + MSTA LTR MaLR 3 428 0 1103 190 100 35 chr17 6093322 6093457 -79345023 - MLT1C LTR MaLR -144 323 157 264 362 11 11 chr17 6093489 6093583 -79344897 + L2 LINE L2 3117 3210 -62 259 330 11 11 chr17 6093595 6093686 -79344794 - L3 LINE CR1 -97 1480 1390 754 272 80 34 chr17 6093943 6094267 -79344213 + L1MC4 LINE L1 5391 5729 -392 446 335 41 10 chr17 6094281 6094475 -79344005 + L1MC4 LINE L1 5793 5992 -1816 312 291 75 22 chr17 6095381 6095515 -79342965 + HAL1b LINE L1 1201 1341 -7 400 299 37 43 chr17 6095601 6095788 -79342692 - MIR3 SINE MIR -3 205 20 225 0 0 0 chr17 6097481 6097506 -79340974 + (CA)n Simple_repeat Simple_repeat 1 25 0 380 106 0 15 chr17 6097635 6097676 -79340804 - MLT2B1 LTR ERVL 0 520 479 405 0 0 0 chr17 6097676 6097721 -79340759 + (TG)n Simple_repeat Simple_repeat 2 46 0 380 106 0 15 chr17 6097721 6097745 -79340735 - MLT2B1 LTR ERVL -41 479 456 228 233 33 0 chr17 6097749 6097809 -79340671 + L1MC4 LINE L1 6635 6696 -1346 207 0 0 0 chr17 6097810 6097833 -79340647 + (GA)n Simple_repeat Simple_repeat 2 24 0 1148 185 35 142 chr17 6097839 6098234 -79340246 - MLT2D LTR ERVL -61 353 1 256 227 91 0 chr17 6098311 6098377 -79340103 - MIR SINE MIR -74 188 117 620 289 28 28 chr17 6098404 6098615 -79339865 + MIR SINE MIR 52 262 0 2266 171 76 78 chr17 6099835 6100390 -79338090 + MLT2B3 LTR ERVL 1 554 0 481 263 23 8 chr17 6101112 6101245 -79337235 - LTR16C LTR ERVL 0 491 357 216 191 0 0 chr17 6101346 6101393 -79337087 + T-rich Low_complexity Low_complexity 1 47 0 2246 82 10 3 chr17 6101396 6101699 -79336781 - AluSc SINE Alu -4 305 1 378 276 86 65 chr17 6101701 6101933 -79336547 - LTR16C LTR ERVL -253 238 2 519 358 39 25 chr17 6102043 6102322 -79336158 - L3 LINE CR1 -2 1575 1293 2155 186 86 0 chr17 6102409 6102851 -79335629 + MLT1D LTR MaLR 26 505 0 714 320 114 53 chr17 6102896 6103389 -79335091 - L3 LINE CR1 -354 1223 701 341 267 11 33 chr17 6104022 6104112 -79334368 - L3 LINE CR1 -903 674 587 2543 181 52 81 chr17 6104229 6104582 -79333898 + L1MB5 LINE L1 5258 5312 -862 1669 193 0 3 chr17 6104582 6104882 -79333598 + AluJo SINE Alu 1 299 -13 2543 181 52 81 chr17 6104882 6105389 -79333091 + L1MB5 LINE L1 5312 5832 -342 235 262 82 0 chr17 6105534 6105595 -79332885 + L3 LINE CR1 609 674 -903 597 193 0 17 chr17 6105632 6105751 -79332729 + L1MB5 LINE L1 6058 6174 0 1984 135 66 23 chr17 6105802 6106151 -79332329 - THE1B LTR MaLR 0 364 1 228 143 41 0 chr17 6106760 6106809 -79331671 + MER112 DNA MER1_type 106 156 -104 1945 130 33 0 chr17 6107160 6107460 -79331020 + AluSg SINE Alu 1 310 0 320 327 46 7 chr17 6107806 6108081 -79330399 + L1ME LINE L1 5373 5704 -417 433 268 41 8 chr17 6108145 6108268 -79330212 - MIR SINE MIR -51 211 85 430 182 0 0 chr17 6108350 6108416 -79330064 - L2 LINE L2 0 3272 3207 239 200 20 0 chr17 6108663 6108713 -79329767 - L2 LINE L2 0 3313 3263 1959 123 0 3 chr17 6108787 6109087 -79329393 + AluSx SINE Alu 1 299 -13 23 0 0 0 chr17 6109202 6109225 -79329255 + AT_rich Low_complexity Low_complexity 1 23 0 324 75 15 30 chr17 6109564 6109631 -79328849 + (TAAA)n Simple_repeat Simple_repeat 4 69 0 2121 55 7 0 chr17 6109786 6110058 -79328422 - AluY SINE Alu -1 310 37 439 70 42 0 chr17 6110068 6110139 -79328341 + T-rich Low_complexity Low_complexity 3 76 0 1641 178 10 0 chr17 6110141 6110444 -79328036 - AluSg SINE Alu -4 306 1 278 314 32 8 chr17 6111188 6111312 -79327168 + HAL1 LINE L1 23 149 -2358 2060 103 3 3 chr17 6111326 6111618 -79326862 + AluSq SINE Alu 1 292 -21 1077 171 6 0 chr17 6111939 6112115 -79326365 - MLT1F1 LTR MaLR 0 567 391 585 267 48 0 chr17 6112085 6112231 -79326249 + MER58B DNA MER1_type 150 302 -39 * 714 210 8 0 chr17 6112238 6112362 -79326118 - MER58B DNA MER1_type -22 319 195 * 1539 196 149 9 chr17 6112351 6112687 -79325793 - MLT1F1 LTR MaLR -184 383 1 782 274 71 110 chr17 6112758 6113544 -79324936 + HAL1 LINE L1 745 1471 -1036 1238 204 14 5 chr17 6113544 6113765 -79324715 + MER58A DNA MER1_type 2 224 0 782 274 71 110 chr17 6113765 6114169 -79324311 + HAL1 LINE L1 1471 1889 -618 2100 116 7 7 chr17 6115036 6115339 -79323141 + AluSq SINE Alu 1 303 -10 1919 118 3 41 chr17 6115758 6116073 -79322407 - AluSx SINE Alu -9 303 1 483 203 15 68 chr17 6116519 6116652 -79321828 - MIR SINE MIR -115 147 22 264 273 0 30 chr17 6117733 6117838 -79320642 + (CACG)n Simple_repeat Simple_repeat 1 101 0 2065 118 17 0 chr17 6118557 6118853 -79319627 + AluSx SINE Alu 1 301 -11 264 301 110 43 chr17 6119199 6119408 -79319072 - L2 LINE L2 -526 2788 2566 387 211 0 0 chr17 6119568 6119658 -79318822 + (CA)n Simple_repeat Simple_repeat 1 90 0 621 257 0 0 chr17 6119705 6119884 -79318596 + (CA)n Simple_repeat Simple_repeat 1 179 0 223 223 202 32 chr17 6120058 6120152 -79318328 - MIR SINE MIR -82 126 17 181 256 0 0 chr17 6120166 6120209 -79318271 - MIR3 SINE MIR -26 182 140 341 248 87 52 chr17 6120608 6120763 -79317717 + MIR3 SINE MIR 35 192 -42 1970 104 3 10 chr17 6120888 6121200 -79317280 + AluY SINE Alu 3 312 0 748 254 174 40 chr17 6121204 6121601 -79316879 - MLT1J LTR MaLR -51 460 11 184 321 71 0 chr17 6121829 6121913 -79316567 - L2 LINE L2 -695 2619 2530 275 227 91 11 chr17 6123182 6123270 -79315210 + L2 LINE L2 2916 3010 -262 210 276 92 40 chr17 6123248 6123324 -79315156 + L2 LINE L2 2722 2801 -513 * 407 257 20 10 chr17 6123341 6123442 -79315038 + MER94 DNA DNA 19 120 -14 555 308 86 4 chr17 6123452 6123686 -79314794 + L2 LINE L2 2809 3061 -252 1032 285 98 21 chr17 6124156 6124535 -79313945 - MLT1K LTR MaLR -34 554 147 246 266 42 112 chr17 6124690 6124833 -79313647 + MIR SINE MIR 60 192 -70 317 287 144 35 chr17 6125789 6125963 -79312517 + MIR SINE MIR 18 210 -52 1875 141 7 0 chr17 6126173 6126470 -79312010 - AluSg SINE Alu 0 310 12 432 236 34 0 chr17 6126603 6126692 -79311788 + L1MC5 LINE L1 7810 7901 -60 211 379 15 0 chr17 6127053 6127119 -79311361 - MIR SINE MIR -108 100 34 467 216 28 102 chr17 6127251 6127427 -79311053 - MIR SINE MIR -1 261 99 300 264 55 11 chr17 6127530 6127621 -79310859 - L1ME LINE L1 -340 5781 5687 384 248 38 53 chr17 6127640 6127773 -79310707 + L2 LINE L2 3180 3310 -3 439 141 22 0 chr17 6127796 6127888 -79310592 + GA-rich Low_complexity Low_complexity 1 94 0 662 216 24 72 chr17 6128005 6128049 -79310431 - MER5B DNA MER1_type 0 178 133 2382 63 0 10 chr17 6128049 6128349 -79310131 - AluSg SINE Alu -13 297 1 662 216 24 72 chr17 6128349 6128471 -79310009 - MER5B DNA MER1_type -45 133 20 465 293 18 24 chr17 6128705 6128869 -79309611 + MER5A DNA MER1_type 26 188 -1 414 255 114 62 chr17 6129540 6129865 -79308615 - HAL1 LINE L1 -832 1675 1334 395 198 127 32 chr17 6129899 6130025 -79308455 - MIR SINE MIR -17 245 108 2108 124 0 7 chr17 6130762 6131068 -79307412 + AluSx SINE Alu 1 304 -8 1974 156 122 64 chr17 6131612 6132094 -79306386 + MLT2B1 LTR ERVL 3 512 -8 287 116 0 116 chr17 6132360 6132429 -79306051 + MLT1K LTR MaLR 182 242 -346 246 235 20 0 chr17 6132396 6132447 -79306033 + MLT1K LTR MaLR 141 192 -396 * 315 291 106 70 chr17 6133186 6133543 -79304937 + L2 LINE L2 2450 2819 -495 2402 69 0 0 chr17 6134579 6134882 -79303598 - AluY SINE Alu -8 303 1 193 294 0 0 chr17 6135398 6135449 -79303031 + L2 LINE L2 2487 2537 -777 2241 141 19 14 chr17 6135549 6135912 -79302568 - LTR45B LTR ERV1 -101 388 24 1824 147 7 3 chr17 6135912 6136205 -79302275 + AluSx SINE Alu 1 294 -18 889 237 163 50 chr17 6136247 6136419 -79302061 + L2 LINE L2 2536 2687 -626 2033 83 3 53 chr17 6136419 6136744 -79301736 + AluSp SINE Alu 1 310 0 889 237 163 50 chr17 6136744 6137169 -79301311 + L2 LINE L2 2687 3221 -92 316 260 10 0 chr17 6137241 6137341 -79301139 - L1MC4 LINE L1 -17 8025 7925 206 214 0 0 chr17 6137345 6137387 -79301093 + (TCCA)n Simple_repeat Simple_repeat 4 45 0 1926 141 3 10 chr17 6137410 6137722 -79300758 - AluSg SINE Alu 0 310 1 570 216 20 40 chr17 6137843 6138011 -79300469 - L1ME2 LINE L1 -5 6161 5997 463 259 0 28 chr17 6138012 6138120 -79300360 + L2 LINE L2 3209 3313 0 2138 121 0 0 chr17 6138565 6138863 -79299617 - AluSq SINE Alu -15 298 1 528 16 0 0 chr17 6139074 6139135 -79299345 + (CA)n Simple_repeat Simple_repeat 2 62 0 225 327 144 26 chr17 6139504 6139657 -79298823 - L2 LINE L2 -1 3271 3101 242 321 47 0 chr17 6140229 6140335 -79298145 + L2 LINE L2 2550 2660 -654 333 0 0 0 chr17 6141348 6141385 -79297095 + (TG)n Simple_repeat Simple_repeat 2 38 0 2011 119 20 0 chr17 6142617 6142910 -79295570 - AluSx SINE Alu -13 299 1 1958 139 0 3 chr17 6142932 6143235 -79295245 - AluSx SINE Alu 0 312 11 1993 126 0 0 chr17 6143250 6143543 -79294937 - AluSx SINE Alu -11 301 9 1886 125 21 4 chr17 6143544 6143825 -79294655 - AluSx SINE Alu -26 286 1 629 304 65 42 chr17 6143866 6144221 -79294259 + L2 LINE L2 2910 3272 0 2448 81 0 0 chr17 6144222 6144520 -79293960 + AluY SINE Alu 1 298 -13 818 163 0 0 chr17 6144953 6145076 -79293404 - AluJo SINE Alu -22 290 168 816 134 0 0 chr17 6145078 6145190 -79293290 - AluJo SINE Alu -200 112 1 430 327 72 33 chr17 6146744 6147050 -79291430 + L1ME4a LINE L1 3459 3776 -2370 487 154 0 11 chr17 6147189 6147280 -79291200 + MLT1C LTR MaLR 1 90 -377 2323 113 3 0 chr17 6147298 6147607 -79290873 - AluSx SINE Alu -2 310 1 202 362 0 0 chr17 6147646 6147715 -79290765 + GA-rich Low_complexity Low_complexity 3 71 0 2097 50 0 12 chr17 6147887 6148146 -79290334 + L1PA8 LINE L1 5913 6168 -4 408 321 137 50 chr17 6148617 6149090 -79289390 + L1ME4a LINE L1 4726 5253 -893 255 301 83 68 chr17 6149091 6149228 -79289252 + L1ME4a LINE L1 5255 5388 -733 2188 118 16 3 chr17 6149228 6149534 -79288946 + AluSg SINE Alu 1 310 0 255 301 83 68 chr17 6149534 6149722 -79288758 + L1ME4a LINE L1 5388 5585 -536 262 300 74 33 chr17 6150363 6150876 -79287604 + L1ME4a LINE L1 5588 6121 0 898 283 118 30 chr17 6151740 6152118 -79286362 + L1MEd LINE L1 9 352 -5958 2196 120 0 13 chr17 6152118 6152434 -79286046 + AluSx SINE Alu 1 312 0 898 283 118 30 chr17 6152434 6152902 -79285578 + L1MEd LINE L1 352 777 -5533 2298 104 0 7 chr17 6152902 6153199 -79285281 + AluSp SINE Alu 1 295 -18 898 283 118 30 chr17 6153199 6153819 -79284661 + L1MEd LINE L1 777 1669 -4641 248 214 36 0 chr17 6154847 6154903 -79283577 + MER53 DNA DNA 132 189 0 250 235 49 25 chr17 6154916 6154997 -79283483 - MLT1K LTR MaLR -342 246 164 2096 76 11 4 chr17 6155086 6155349 -79283131 + AluSg SINE Alu 34 298 -12 834 185 93 6 chr17 6155626 6155788 -79282692 - MER5B DNA MER1_type -2 176 1 1461 127 162 4 chr17 6155935 6156188 -79282292 + AluSx SINE Alu 1 293 -19 2411 61 0 38 chr17 6156206 6156519 -79281961 + AluY SINE Alu 5 305 -6 306 201 71 32 chr17 6156580 6156734 -79281746 + L1ME4a LINE L1 5962 6121 0 558 290 51 19 chr17 6157758 6157972 -79280508 + MIR SINE MIR 25 245 -17 196 330 20 30 chr17 6158008 6158108 -79280372 + L2 LINE L2 3001 3099 -173 359 273 106 15 chr17 6159201 6159333 -79279147 + MIR3 SINE MIR 56 199 -9 1875 238 74 6 chr17 6159937 6160559 -79277921 + L1MEd LINE L1 2577 3240 -2889 645 165 0 31 chr17 6160560 6160687 -79277793 + MLT1A1 LTR MaLR 197 319 -46 3935 238 60 47 chr17 6160690 6161462 -79277018 + L1MEd LINE L1 3235 3996 -2149 2488 70 0 0 chr17 6161462 6161760 -79276720 + AluY SINE Alu 1 298 -13 3935 238 60 47 chr17 6161760 6162136 -79276344 + L1MEd LINE L1 3996 4366 -1779 1864 161 0 24 chr17 6162136 6162427 -79276053 - AluJb SINE Alu -14 298 15 3935 238 60 47 chr17 6162427 6163467 -79275013 + L1MEd LINE L1 4366 5449 -696 316 222 56 0 chr17 6163644 6163716 -79274764 - HERVL LTR ERVL -848 4806 4731 593 236 25 6 chr17 6163842 6163999 -79274481 + L1MB7 LINE L1 6007 6166 -18 2208 129 3 0 chr17 6164342 6164653 -79273827 + AluSx SINE Alu 1 312 0 1004 120 0 0 chr17 6164671 6164804 -79273676 + AluSg SINE Alu 1 133 -177 2129 138 3 3 chr17 6164804 6165115 -79273365 + AluSx SINE Alu 1 311 -1 403 213 13 20 chr17 6165115 6165265 -79273215 + GA-rich Low_complexity Low_complexity 2 150 0 385 225 96 53 chr17 6165830 6165992 -79272488 + L1M4 LINE L1 5069 5243 -903 4161 4 0 0 chr17 6165992 6166450 -79272030 + L1PA2 LINE L1 5698 6155 0 385 225 96 53 chr17 6166450 6166496 -79271984 + L1M4 LINE L1 5243 5286 -860 220 27 54 0 chr17 6166550 6166587 -79271893 + (TAAAA)n Simple_repeat Simple_repeat 3 41 0 539 186 155 0 chr17 6166600 6166793 -79271687 + L1ME1 LINE L1 5218 5440 -722 1355 112 0 0 chr17 6166793 6166963 -79271517 + AluSq SINE Alu 1 170 -143 735 273 62 32 chr17 6166964 6167305 -79271175 + L1ME1 LINE L1 5810 6160 -6 586 206 18 42 chr17 6167339 6167504 -79270976 - MLT1J1 LTR MaLR -285 161 1 240 309 41 24 chr17 6168376 6168499 -79269981 - MIR3 SINE MIR -48 160 36 2259 72 3 52 chr17 6168523 6168850 -79269630 + AluSq SINE Alu 2 313 0 2294 121 0 0 chr17 6169009 6169315 -79269165 + AluSx SINE Alu 1 306 -6 1140 157 0 5 chr17 6171069 6171266 -79267214 - MLT1D LTR MaLR 0 505 310 542 208 66 85 chr17 6171305 6171517 -79266963 - MLT1D LTR MaLR -295 210 3 1426 49 5 16 chr17 6171761 6171945 -79266535 - L1PA7 LINE L1 -1 6153 5972 291 297 93 0 chr17 6172695 6172813 -79265667 - MIR3 SINE MIR -46 162 34 267 54 0 0 chr17 6173843 6173880 -79264600 + (CAGGG)n Simple_repeat Simple_repeat 2 38 0 284 247 75 21 chr17 6174096 6174189 -79264291 + MIR3 SINE MIR 87 184 -24 233 351 9 0 chr17 6175140 6175251 -79263229 - L3 LINE CR1 -36 1541 1430 580 329 50 22 chr17 6175471 6175693 -79262787 - MIR SINE MIR -26 236 9 192 97 0 0 chr17 6176504 6176535 -79261945 + (CGGGGG)n Simple_repeat Simple_repeat 3 33 0 416 59 0 0 chr17 6176668 6176719 -79261761 - AluSp/q SINE Alu -37 276 226 2383 100 0 0 chr17 6177402 6177702 -79260778 + AluSg SINE Alu 1 300 -10 2376 98 3 9 chr17 6177771 6178086 -79260394 + AluSp SINE Alu 1 313 0 3988 64 14 50 chr17 6178479 6178806 -79259674 + L1PA8 LINE L1 5619 5918 -254 2417 108 0 0 chr17 6178806 6179112 -79259368 + AluSc SINE Alu 1 306 -3 3988 64 14 50 chr17 6179112 6179359 -79259121 + L1PA8 LINE L1 5918 6172 0 2262 54 0 0 chr17 6180011 6180271 -79258209 - AluSc SINE Alu -49 260 1 2198 109 13 16 chr17 6181043 6181347 -79257133 + AluSg SINE Alu 1 303 -7 204 280 120 13 chr17 6182168 6182243 -79256237 - MIR SINE MIR -1 261 179 361 127 0 0 chr17 6182243 6182298 -79256182 + MSTD LTR MaLR 1 55 -341 2430 83 0 3 chr17 6182316 6182616 -79255864 - AluSq SINE Alu -14 299 1 447 311 61 25 chr17 6182634 6182830 -79255650 + L1ME3 LINE L1 5766 5968 -202 1012 172 27 11 chr17 6183012 6183198 -79255282 - AluJo SINE Alu -4 308 120 1763 138 32 0 chr17 6183311 6183622 -79254858 - L1MA5A LINE L1 0 6297 5977 249 105 0 0 chr17 6183628 6183666 -79254814 + MLT1A2 LTR MaLR 75 112 -262 2748 204 35 24 chr17 6184130 6184761 -79253719 + LTR9B LTR ERV1 7 644 0 248 241 46 22 chr17 6184849 6184918 -79253562 + L1ME3 LINE L1 6025 6091 -79 1057 175 5 63 chr17 6184918 6185090 -79253390 + MER6B DNA MER2_type 1 159 -706 2143 107 0 67 chr17 6185090 6185417 -79253063 - AluSq SINE Alu -8 305 1 1057 175 5 63 chr17 6185417 6185467 -79253013 + MER6B DNA MER2_type 159 210 0 248 241 46 22 chr17 6185467 6185533 -79252947 + L1ME3 LINE L1 6091 6163 -7 312 91 0 0 chr17 6185934 6185978 -79252502 + (TCCCC)n Simple_repeat Simple_repeat 1 44 0 2105 117 7 26 chr17 6185978 6186287 -79252193 - AluSx SINE Alu -9 303 1 299 320 0 13 chr17 6186290 6186368 -79252112 - L3 LINE CR1 -1269 308 232 2391 74 0 10 chr17 6186937 6187236 -79251244 - AluSg SINE Alu -13 297 2 551 308 128 4 chr17 6188476 6188710 -79249770 - L2 LINE L2 -95 3177 2915 566 204 71 0 chr17 6189289 6189402 -79249078 + L2 LINE L2 3193 3313 0 207 213 0 43 chr17 6190268 6190315 -79248165 - MIR SINE MIR -88 120 79 321 345 34 14 chr17 6190432 6190580 -79247900 - L2 LINE L2 -529 2785 2635 2366 95 0 13 chr17 6190905 6191221 -79247259 - AluSx SINE Alu 0 312 1 2439 83 3 0 chr17 6191807 6192108 -79246372 + AluSx SINE Alu 1 302 -10 302 344 32 8 chr17 6192390 6192515 -79245965 - MIR SINE MIR -96 166 39 362 206 54 11 chr17 6193378 6193470 -79245010 + MIR3 SINE MIR 65 160 -48 219 253 101 25 chr17 6194533 6194612 -79243868 + MIR3 SINE MIR 102 186 -22 1075 207 45 5 chr17 6196645 6196867 -79241613 - AluJo SINE Alu -81 231 1 465 224 164 55 chr17 6197026 6197191 -79241289 + MER5A DNA MER1_type 4 186 -3 215 358 94 35 chr17 6197194 6197596 -79240884 + L2 LINE L2 2263 2688 -626 * 346 336 114 57 chr17 6197595 6198032 -79240448 + L2 LINE L2 2811 3272 0 237 65 0 0 chr17 6198044 6198075 -79240405 + (TGAA)n Simple_repeat Simple_repeat 2 32 0 207 100 0 0 chr17 6200172 6200202 -79238278 + (TTCA)n Simple_repeat Simple_repeat 2 31 0 281 347 32 0 chr17 6200203 6200298 -79238182 - L2 LINE L2 -13 3300 3203 499 332 72 11 chr17 6200362 6200624 -79237856 + L2 LINE L2 2481 2758 -556 272 325 179 51 chr17 6200887 6201222 -79237258 + L3 LINE CR1 1180 1557 -20 443 242 147 19 chr17 6201658 6201815 -79236665 - MIR SINE MIR -70 192 16 929 258 141 42 chr17 6202111 6202665 -79235815 + L1MC4a LINE L1 5364 5972 -1836 314 316 15 0 chr17 6203678 6203811 -79234669 + LTR33 LTR ERVL 382 516 -5 331 316 129 59 chr17 6203848 6204322 -79234158 + L2 LINE L2 2807 3313 0 763 49 0 0 chr17 6205384 6205486 -79232994 - L1P3 LINE L1 -357 5797 5696 223 342 13 0 chr17 6205566 6205642 -79232838 + MIR3 SINE MIR 101 177 -31 352 142 0 57 chr17 6205731 6205808 -79232672 + MIR SINE MIR 103 172 -90 253 303 74 33 chr17 6206233 6206355 -79232125 + L2 LINE L2 3145 3271 -1 1990 95 29 0 chr17 6206391 6206716 -79231764 + AluSg SINE Alu 1 333 0 239 274 27 0 chr17 6206964 6207037 -79231443 + MIR SINE MIR 65 139 -69 876 73 0 0 chr17 6207809 6207918 -79230562 + AluSq/x SINE Alu 25 133 -180 2044 127 0 10 chr17 6207926 6208225 -79230255 + AluSx SINE Alu 1 296 -16 478 290 34 0 chr17 6208326 6208502 -79229978 - MLT1J2 LTR MaLR -259 191 10 1660 65 9 13 chr17 6209482 6209712 -79228768 + AluSc SINE Alu 1 229 -80 1322 175 77 17 chr17 6209920 6210217 -79228263 - MER58B DNA MER1_type 0 341 27 583 189 42 100 chr17 6210248 6210438 -79228042 - MER5A DNA MER1_type 0 189 11 232 279 76 25 chr17 6210508 6210587 -79227893 + L2 LINE L2 3187 3269 -3 261 229 157 0 chr17 6210637 6210720 -79227760 + MIR SINE MIR 87 182 -80 493 214 0 103 chr17 6211538 6211683 -79226797 + MIR SINE MIR 79 208 -54 209 307 113 31 chr17 6211717 6212079 -79226401 + L2 LINE L2 2669 3096 -176 231 291 74 40 chr17 6212204 6212379 -79226101 - MER5A DNA MER1_type -5 184 4 516 170 0 0 chr17 6212901 6213007 -79225473 + GA-rich Low_complexity Low_complexity 4 109 0 229 380 65 0 chr17 6213015 6213107 -79225373 - MIR SINE MIR -81 127 30 2072 96 24 10 chr17 6214489 6214831 -79223649 - AluSp SINE Alu 0 313 1 195 389 0 0 chr17 6214893 6214965 -79223515 + L2 LINE L2 2427 2498 -816 305 254 40 63 chr17 6214980 6215106 -79223374 - L1MC5 LINE L1 -29 7932 7810 2495 173 16 42 chr17 6215964 6216331 -79222149 + L1MB8 LINE L1 5375 5723 -455 1463 106 55 0 chr17 6216331 6216369 -79222111 + AluSg/x SINE Alu 82 116 -194 206 32 32 0 chr17 6216369 6216400 -79222080 + (TAAAA)n Simple_repeat Simple_repeat 2 33 0 1463 106 55 0 chr17 6216400 6216578 -79221902 + AluSg/x SINE Alu 116 310 0 2495 173 16 42 chr17 6216578 6216781 -79221699 + L1MB8 LINE L1 5723 5930 -248 189 0 0 0 chr17 6216881 6216902 -79221578 + (TCCCC)n Simple_repeat Simple_repeat 5 25 0 700 183 137 0 chr17 6217166 6217297 -79221183 + AluSx SINE Alu 42 190 -122 470 317 128 32 chr17 6217345 6217815 -79220665 + L2 LINE L2 2350 2864 -450 253 323 40 32 chr17 6217970 6218094 -79220386 + L2 LINE L2 2677 2801 -513 201 264 0 85 chr17 6220085 6220214 -79218266 + L2 LINE L2 2932 3049 -223 334 393 9 5 chr17 6220940 6221159 -79217321 + L2 LINE L2 2871 3090 -182 2340 89 0 0 chr17 6221613 6221916 -79216564 + AluSx SINE Alu 1 303 -9 740 257 23 0 chr17 6222723 6222898 -79215582 - MER58A DNA MER1_type -1 223 45 2341 106 0 0 chr17 6223725 6224037 -79214443 - AluSx SINE Alu 0 312 1 255 277 62 39 chr17 6224920 6225050 -79213430 - L2 LINE L2 -219 3053 2921 337 264 20 81 chr17 6225559 6225707 -79212773 + L3b LINE CR1 1290 1428 -155 285 219 106 41 chr17 6225888 6226011 -79212469 + MER5A DNA MER1_type 29 159 -30 185 324 66 44 chr17 6225903 6226039 -79212441 - MER5B DNA MER1_type -37 141 3 * 666 294 108 5 chr17 6227219 6227423 -79211057 - MIR SINE MIR -22 240 16 2418 175 88 63 chr17 6227564 6228195 -79210285 + MER21B LTR ERV1 267 861 -2 2309 91 0 0 chr17 6228294 6228590 -79209890 - AluY SINE Alu -15 296 1 270 160 0 0 chr17 6229163 6229213 -79209267 + (CA)n Simple_repeat Simple_repeat 2 51 0 295 290 121 2 chr17 6229358 6229511 -79208969 - MIR3 SINE MIR -16 192 23 1874 192 32 68 chr17 6230032 6230498 -79207982 + MLT2B1 LTR ERVL 1 447 -73 2359 78 10 0 chr17 6230498 6230804 -79207676 - AluSp SINE Alu -4 309 1 1874 192 32 68 chr17 6230804 6230868 -79207612 + MLT2B1 LTR ERVL 447 512 -8 1157 195 32 18 chr17 6231146 6231367 -79207113 + MER58A DNA MER1_type 1 224 0 246 32 0 0 chr17 6232883 6232914 -79205566 + (TC)n Simple_repeat Simple_repeat 2 32 0 * 398 20 20 0 chr17 6232913 6232964 -79205516 + (TA)n Simple_repeat Simple_repeat 1 52 0 2300 111 0 0 chr17 6233323 6233629 -79204851 - AluSg SINE Alu -4 306 1 300 191 236 0 chr17 6233826 6233915 -79204565 + LTR16A1 LTR ERVL 7 116 -341 * 995 146 18 0 chr17 6233914 6234085 -79204395 + MER58A DNA MER1_type 42 215 -9 679 309 52 4 chr17 6234130 6234399 -79204081 + LTR16A1 LTR ERVL 170 451 -6 2164 123 3 0 chr17 6234732 6235041 -79203439 - AluY SINE Alu -1 310 1 387 304 200 24 chr17 6235120 6235370 -79203110 - L2 LINE L2 0 3272 2979 204 350 47 47 chr17 6235521 6235795 -79202685 - L2 LINE L2 -169 3103 2830 255 344 64 57 chr17 6235841 6236123 -79202357 - L2 LINE L2 -569 2745 2462 292 268 57 32 chr17 6236150 6236273 -79202207 + MIR3 SINE MIR 72 197 -11 572 309 80 0 chr17 6236282 6236483 -79201997 - MIR SINE MIR -41 221 5 379 324 84 6 chr17 6236779 6236958 -79201522 - MLT1J2 LTR MaLR 0 450 258 2385 77 0 0 chr17 6236973 6237271 -79201209 - AluY SINE Alu -11 300 3 1896 141 3 10 chr17 6237273 6237579 -79200901 - AluSq SINE Alu -9 304 1 916 127 18 6 chr17 6237581 6237746 -79200734 - MER58A DNA MER1_type -8 216 50 328 253 11 23 chr17 6237753 6237840 -79200640 - MER58A DNA MER1_type -12 95 10 265 263 95 80 chr17 6238055 6238192 -79200288 - L2 LINE L2 0 3272 3134 1154 186 4 72 chr17 6238298 6238561 -79199919 + AluJo SINE Alu 55 299 -13 272 286 39 0 chr17 6238583 6238660 -79199820 + L2 LINE L2 3162 3241 -31 180 0 0 0 chr17 6238675 6238695 -79199785 + (TGAA)n Simple_repeat Simple_repeat 1 20 0 2186 88 3 33 chr17 6238958 6239263 -79199217 - AluSx SINE Alu -16 296 1 330 327 6 42 chr17 6239335 6239500 -79198980 - MIR3 SINE MIR -35 173 15 2381 64 0 0 chr17 6239575 6239872 -79198608 - AluY SINE Alu -14 297 1 497 68 0 0 chr17 6239893 6239967 -79198513 - Alu SINE Alu 0 310 237 285 366 55 12 chr17 6240077 6240241 -79198239 - L2 LINE L2 -43 3270 3100 651 311 88 26 chr17 6240332 6240454 -79198026 - LTR33 LTR ERVL -3 518 405 4222 34 4 0 chr17 6240454 6240951 -79197529 + L1PA4 LINE L1 5657 6155 0 651 311 88 26 chr17 6240951 6241282 -79197198 - LTR33 LTR ERVL -116 405 37 2642 297 110 36 chr17 6241329 6242271 -79196209 + HAL1 LINE L1 26 897 -1610 2315 97 0 0 chr17 6242271 6242571 -79195909 + AluSx SINE Alu 1 300 -12 2642 297 110 36 chr17 6242571 6242892 -79195588 + HAL1 LINE L1 897 1193 -1314 2729 106 3 5 chr17 6242892 6243268 -79195212 - THE1C LTR MaLR 0 375 1 2642 297 110 36 chr17 6243268 6243369 -79195111 + HAL1 LINE L1 1193 1285 -1222 2692 154 12 51 chr17 6243369 6243787 -79194693 + MLT1C LTR MaLR 1 399 -68 1775 119 47 72 chr17 6243787 6244106 -79194374 - AluJo SINE Alu -1 311 1 2692 154 12 51 chr17 6244106 6244173 -79194307 + MLT1C LTR MaLR 399 467 0 2642 297 110 36 chr17 6244173 6244691 -79193789 + HAL1 LINE L1 1285 2050 -457 1070 282 102 15 chr17 6244691 6245092 -79193388 - L2 LINE L2 -26 3287 2852 1358 281 54 30 chr17 6245106 6245518 -79192962 - L2 LINE L2 -579 2735 2305 2184 201 24 72 chr17 6245518 6246100 -79192380 + MLT2B3 LTR ERVL 1 554 0 1358 281 54 30 chr17 6246100 6246225 -79192255 - L2 LINE L2 -1009 2305 2185 425 294 23 60 chr17 6246239 6246504 -79191976 + HAL1 LINE L1 2055 2309 -198 2345 133 72 8 chr17 6246855 6247255 -79191225 - MSTA LTR MaLR -2 426 1 405 70 0 0 chr17 6248171 6248228 -79190252 + (TC)n Simple_repeat Simple_repeat 2 58 0 1179 189 18 14 chr17 6248240 6248462 -79190018 - AluJo SINE Alu -16 296 74 2157 90 0 4 chr17 6248569 6248848 -79189632 - AluSx SINE Alu -34 278 1 2450 286 69 24 chr17 6249672 6250999 -79187481 - L1MEc LINE L1 -4410 1986 600 359 266 276 16 chr17 6251086 6251277 -79187203 - MLT1H1 LTR MaLR -189 366 126 1293 212 146 35 chr17 6251277 6251674 -79186806 + MLT2B1 LTR ERVL 1 441 -79 258 32 0 0 chr17 6251680 6251711 -79186769 + (CA)n Simple_repeat Simple_repeat 2 32 0 219 69 0 0 chr17 6251716 6251745 -79186735 + (TATG)n Simple_repeat Simple_repeat 3 31 0 29 0 0 62 chr17 6251748 6251796 -79186684 + AT_rich Low_complexity Low_complexity 1 45 0 372 197 0 0 chr17 6251812 6251878 -79186602 - Tigger5 DNA MER2_type 0 2323 2258 270 141 0 109 chr17 6251933 6251997 -79186483 - Tigger5 DNA MER2_type 0 2323 2267 246 116 0 0 chr17 6252008 6252051 -79186429 + (TG)n Simple_repeat Simple_repeat 2 44 0 378 0 0 0 chr17 6252152 6252194 -79186286 + (TG)n Simple_repeat Simple_repeat 2 43 0 294 77 0 0 chr17 6252200 6252239 -79186241 + MLT2D LTR ERVL 376 414 0 * 402 240 117 13 chr17 6252239 6252377 -79186103 - MLT1H LTR MaLR -421 174 1 1162 152 165 9 chr17 6252383 6252692 -79185788 + MSTA LTR MaLR 1 406 -26 2108 108 3 3 chr17 6252701 6252987 -79185493 - AluSg SINE Alu -1 309 24 281 139 0 0 chr17 6252994 6253037 -79185443 + MSTA LTR MaLR 386 428 0 1412 251 101 6 chr17 6253039 6253545 -79184935 - MER20B DNA MER1_type -61 722 169 318 331 13 53 chr17 6255086 6255237 -79183243 + L2 LINE L2 2607 2751 -563 231 167 0 91 chr17 6255333 6255399 -79183081 + MIR SINE MIR 132 191 -71 555 85 0 0 chr17 6255444 6255526 -79182954 + (CAT)n Simple_repeat Simple_repeat 1 82 0 537 110 30 0 chr17 6256404 6256504 -79181976 + (TCTA)n Simple_repeat Simple_repeat 2 104 0 263 306 153 8 chr17 6256504 6256628 -79181852 - L2 LINE L2 -4 3309 3168 197 341 57 16 chr17 6257248 6257371 -79181109 - MIR3 SINE MIR -78 130 3 827 200 107 19 chr17 6257464 6257669 -79180811 + MIR SINE MIR 16 238 -24 2205 130 0 13 chr17 6258187 6258495 -79179985 + AluSx SINE Alu 2 305 -7 356 206 66 110 chr17 6258849 6258985 -79179495 + MER91B DNA MER1_type 1 130 -60 342 218 0 12 chr17 6259000 6259081 -79179399 + MER91B DNA MER1_type 90 175 -21 193 148 0 148 chr17 6260125 6260186 -79178294 - MIR SINE MIR -56 206 155 379 211 11 0 chr17 6260193 6260283 -79178197 - MER69A DNA AcHobo -23 154 64 262 141 0 141 chr17 6260303 6260367 -79178113 - MIR SINE MIR -105 157 103 358 257 81 95 chr17 6260945 6261155 -79177325 - HAL1 LINE L1 -1 2506 2300 472 202 0 21 chr17 6261327 6261421 -79177059 - MER66B LTR ERV1 0 486 395 2481 89 0 6 chr17 6261441 6261754 -79176726 + AluSq SINE Alu 1 311 -2 1546 182 42 7 chr17 6261829 6262137 -79176343 - MER66B LTR ERV1 -141 345 27 2319 86 3 26 chr17 6262750 6263063 -79175417 - AluSx SINE Alu -6 306 1 298 211 88 70 chr17 6264254 6264368 -79174112 - MIR3 SINE MIR -6 202 87 626 0 14 0 chr17 6264399 6264473 -79174007 + (TTTTC)n Simple_repeat Simple_repeat 5 79 0 1874 181 65 65 chr17 6264840 6265267 -79173213 - MLT1D LTR MaLR -5 500 71 2408 94 0 0 chr17 6265267 6265566 -79172914 + AluSx SINE Alu 2 300 -12 1874 181 65 65 chr17 6265566 6265631 -79172849 - MLT1D LTR MaLR -433 72 8 418 248 10 10 chr17 6266533 6266634 -79171846 + L2 LINE L2 3209 3309 -4 194 304 18 0 chr17 6266675 6266731 -79171749 - MIR3 SINE MIR -31 177 121 1196 239 64 0 chr17 6266734 6267031 -79171449 + MER90 LTR ERV1 297 612 -2 310 363 73 0 chr17 6267258 6267462 -79171018 - L2 LINE L2 -522 2792 2574 2398 104 0 0 chr17 6268074 6268381 -79170099 - AluSq SINE Alu -6 307 1 1260 239 144 17 chr17 6268496 6268906 -79169574 - MLT1C LTR MaLR -5 462 1 203 357 123 7 chr17 6270041 6270195 -79168285 - L2 LINE L2 -544 2770 2599 579 193 36 94 chr17 6270275 6270467 -79168013 + MER91B DNA MER1_type 4 184 -6 558 254 75 10 chr17 6270999 6271200 -79167280 + LTR33 LTR ERVL 1 214 -307 238 290 122 36 chr17 6272297 6272576 -79165904 - L2 LINE L2 -653 2661 2359 409 306 31 83 chr17 6273329 6273443 -79165037 - MIR SINE MIR 0 262 164 2083 122 7 3 chr17 6273443 6273774 -79164706 - AluSx SINE Alu 0 312 2 409 306 31 83 chr17 6273774 6273888 -79164592 - MIR SINE MIR -98 164 46 2293 119 0 0 chr17 6274425 6274720 -79163760 - AluSx SINE Alu -17 295 1 1395 229 44 11 chr17 6275011 6275374 -79163106 + MER74B LTR ERVL 56 430 -192 336 239 11 34 chr17 6275542 6275630 -79162850 + MER74B LTR ERVL 447 532 -90 2023 135 0 20 chr17 6275916 6276219 -79162261 + AluSx SINE Alu 5 301 -11 874 245 5 33 chr17 6278473 6278637 -79159843 + MIR SINE MIR 45 212 -50 2346 99 3 7 chr17 6278637 6278940 -79159540 + AluSx SINE Alu 1 302 -10 186 43 0 0 chr17 6278940 6278963 -79159517 + (TA)n Simple_repeat Simple_repeat 2 24 0 874 245 5 33 chr17 6278963 6279009 -79159471 + MIR SINE MIR 210 250 -12 203 218 141 39 chr17 6279465 6279543 -79158937 - L2 LINE L2 -3 3310 3225 239 222 0 0 chr17 6279829 6279874 -79158606 - MIR SINE MIR -68 140 96 2247 278 75 56 chr17 6279920 6280105 -79158375 - MER45C DNA AcHobo -628 953 773 2441 100 0 0 chr17 6280105 6280414 -79158066 - AluSc SINE Alu 0 309 1 2247 278 75 56 chr17 6280414 6281046 -79157434 - MER45C DNA AcHobo -808 773 115 2406 98 0 0 chr17 6281046 6281351 -79157129 + AluSx SINE Alu 1 305 -7 2247 278 75 56 chr17 6281351 6281429 -79157051 - MER45C DNA AcHobo -1466 115 40 271 167 114 68 chr17 6281692 6281824 -79156656 + (CTGGGG)n Simple_repeat Simple_repeat 4 141 0 2016 108 0 0 chr17 6282122 6282373 -79156107 - AluSq SINE Alu -62 251 1 1315 73 6 0 chr17 6282386 6282550 -79155930 - AluY SINE Alu -14 297 133 2855 32 0 0 chr17 6282550 6282865 -79155615 - AluYb8 SINE Alu -3 315 1 637 287 78 41 chr17 6283163 6283407 -79155073 - L1M4 LINE L1 -2868 3278 3026 305 197 14 0 chr17 6283529 6283600 -79154880 + MER69A DNA AcHobo 106 177 0 339 275 90 85 chr17 6283731 6283920 -79154560 - L1M4 LINE L1 -3309 2837 2648 1876 179 3 3 chr17 6284061 6284369 -79154111 + AluJo SINE Alu 1 308 -4 366 354 65 10 chr17 6284709 6285017 -79153463 - HAL1 LINE L1 -741 1766 1442 961 131 0 14 chr17 6285028 6285173 -79153307 - FLAM_C SINE Alu 0 143 1 2544 65 0 3 chr17 6285329 6285639 -79152841 - AluY SINE Alu -2 309 1 1169 170 43 0 chr17 6285834 6286022 -79152458 - AluJo SINE Alu -116 196 1 183 42 0 0 chr17 6286026 6286050 -79152430 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 6519 181 52 17 chr17 6286369 6286492 -79151988 - L1MB7 LINE L1 -20 6164 6047 2374 104 0 13 chr17 6286492 6286808 -79151672 - AluSx SINE Alu 0 312 1 6519 181 52 17 chr17 6286808 6288973 -79149507 - L1MB7 LINE L1 -137 6047 3793 840 172 38 59 chr17 6289268 6289454 -79149026 + MER5A DNA MER1_type 7 188 -1 1516 107 158 12 chr17 6289967 6290220 -79148260 - AluSg SINE Alu -10 290 1 734 213 100 0 chr17 6290270 6290430 -79148050 + MER45A DNA AcHobo 3 178 0 196 321 12 37 chr17 6291282 6291363 -79147117 - L2 LINE L2 0 3272 3194 311 296 11 0 chr17 6291747 6291835 -79146645 + L1M4 LINE L1 3793 3881 -2265 2581 157 8 26 chr17 6292399 6292844 -79145636 + L1MB3 LINE L1 5695 6132 -51 2389 98 0 0 chr17 6292844 6293140 -79145340 + AluSx SINE Alu 1 296 -16 2581 157 8 26 chr17 6293140 6293190 -79145290 + L1MB3 LINE L1 6132 6181 -2 266 209 22 33 chr17 6293196 6293287 -79145193 + (TAA)n Simple_repeat Simple_repeat 3 92 0 24 0 0 0 chr17 6293327 6293351 -79145129 + AT_rich Low_complexity Low_complexity 1 24 0 232 329 76 55 chr17 6293603 6293986 -79144494 + L1MEd LINE L1 330 720 -5399 252 0 0 0 chr17 6294001 6294029 -79144451 + (CA)n Simple_repeat Simple_repeat 1 28 0 288 303 52 32 chr17 6294141 6294296 -79144184 - L2 LINE L2 -932 2382 2225 192 364 65 48 chr17 6294459 6294690 -79143790 + L2 LINE L2 3035 3269 -3 488 276 98 6 chr17 6294974 6295137 -79143343 - MIR SINE MIR -52 210 33 328 325 53 8 chr17 6295649 6295792 -79142688 + MIR SINE MIR 28 145 -63 202 220 40 90 chr17 6296122 6296222 -79142258 + MIR SINE MIR 45 139 -69 402 257 140 0 chr17 6297506 6297642 -79140838 + MIR SINE MIR 65 219 -43 709 236 85 19 chr17 6298697 6298909 -79139571 - MIR SINE MIR -9 253 28 411 309 157 5 chr17 6299276 6299486 -79138994 + MIR SINE MIR 2 243 -19 353 298 6 0 chr17 6300477 6300638 -79137842 + (TG)n Simple_repeat Simple_repeat 1 162 0 256 253 0 53 chr17 6300639 6300734 -79137746 + CT-rich Low_complexity Low_complexity 4 93 0 231 36 0 0 chr17 6300841 6300869 -79137611 + (CA)n Simple_repeat Simple_repeat 2 29 0 2100 112 3 3 chr17 6301351 6301646 -79136834 + AluSg SINE Alu 1 295 -15 342 266 52 32 chr17 6302076 6302225 -79136255 - MIR3 SINE MIR -52 156 33 210 298 181 0 chr17 6302967 6303061 -79135419 - MIR3 SINE MIR -52 156 46 463 252 54 77 chr17 6303797 6303863 -79134617 + L2 LINE L2 2848 2914 -399 2148 111 0 10 chr17 6303863 6304161 -79134319 + AluSq SINE Alu 5 299 -14 463 252 54 77 chr17 6304161 6304316 -79134164 + L2 LINE L2 2914 3064 -249 2530 239 61 28 chr17 6304366 6304607 -79133873 - L1ME1 LINE L1 -6 6160 5920 400 313 79 68 chr17 6304607 6305001 -79133479 - L1PB3 LINE L1 -229 5925 5537 2096 117 3 0 chr17 6305001 6305300 -79133180 - AluSp SINE Alu -13 300 1 400 313 79 68 chr17 6305300 6305488 -79132992 - L1PB3 LINE L1 -617 5537 5333 1973 124 24 7 chr17 6305488 6305786 -79132694 - AluSg SINE Alu -7 303 1 400 313 79 68 chr17 6305786 6305838 -79132642 - L1PB3 LINE L1 -821 5333 5283 283 295 54 54 chr17 6305847 6305976 -79132504 + L2 LINE L2 3185 3313 0 327 285 117 36 chr17 6305980 6306117 -79132363 + MIR3 SINE MIR 49 196 -12 256 281 27 96 chr17 6306568 6306714 -79131766 + MIR3 SINE MIR 19 154 -54 189 0 0 0 chr17 6307345 6307366 -79131114 + (GGCTG)n Simple_repeat Simple_repeat 5 25 0 1071 75 0 0 chr17 6307675 6307808 -79130672 + AluSq/x SINE Alu 1 133 -180 2110 135 0 19 chr17 6307814 6308132 -79130348 + AluSx SINE Alu 1 312 0 352 247 21 11 chr17 6308672 6308765 -79129715 - MIR SINE MIR -74 134 41 1897 65 47 127 chr17 6309285 6309624 -79128856 - AluSx SINE Alu 0 312 1 389 333 21 14 chr17 6309698 6309839 -79128641 + L2 LINE L2 3116 3257 -15 399 255 131 38 chr17 6310412 6310679 -79127801 - MLT1I LTR MaLR -1 408 117 207 286 29 14 chr17 6310743 6310813 -79127667 + MIR3 SINE MIR 118 188 -20 853 191 105 49 chr17 6311382 6311706 -79126774 + L1M4 LINE L1 4125 4466 -1680 207 300 55 9 chr17 6312117 6312227 -79126253 + L3 LINE CR1 1304 1418 -159 223 328 50 42 chr17 6312255 6312374 -79126106 - L2 LINE L2 -43 3229 3110 2380 84 0 0 chr17 6312699 6312997 -79125483 - AluSq SINE Alu -15 298 1 294 29 0 0 chr17 6313325 6313360 -79125120 + (TG)n Simple_repeat Simple_repeat 1 35 0 330 278 68 25 chr17 6313410 6313572 -79124908 - L2 LINE L2 -338 2975 2807 227 359 0 0 chr17 6313563 6313627 -79124853 + L3 LINE CR1 1505 1568 -9 * 339 338 26 7 chr17 6313899 6314050 -79124430 - MIR SINE MIR -3 259 106 510 294 114 5 chr17 6314536 6314747 -79123733 + MIR SINE MIR 3 236 -26 924 127 0 22 chr17 6314930 6315064 -79123416 - FLAM_C SINE Alu 0 133 3 201 121 0 0 chr17 6315389 6315422 -79123058 + (CAGA)n Simple_repeat Simple_repeat 3 35 0 1754 165 0 28 chr17 6316283 6316604 -79121876 + AluJo SINE Alu 1 312 0 270 0 0 0 chr17 6316666 6316696 -79121784 + (TC)n Simple_repeat Simple_repeat 1 30 0 * 309 89 0 0 chr17 6316695 6316740 -79121740 + (CA)n Simple_repeat Simple_repeat 1 45 0 309 89 0 0 chr17 6316888 6316933 -79121547 + (CA)n Simple_repeat Simple_repeat 1 45 0 626 280 60 10 chr17 6317112 6317312 -79121168 + MIR SINE MIR 39 248 -14 433 326 72 54 chr17 6317567 6317972 -79120508 + L2 LINE L2 2834 3245 -27 2151 98 0 7 chr17 6318771 6319066 -79119414 + AluSx SINE Alu 9 301 -11 248 329 0 15 chr17 6319123 6319236 -79119244 - MIR SINE MIR -68 140 76 258 32 0 0 chr17 6319761 6319792 -79118688 + (TTTTC)n Simple_repeat Simple_repeat 2 32 0 2148 70 29 0 chr17 6319794 6320067 -79118413 - AluSp SINE Alu -32 281 1 353 181 134 79 chr17 6322080 6322207 -79116273 - MIR3 SINE MIR -17 191 58 424 279 16 16 chr17 6322264 6322393 -79116087 + MIR SINE MIR 49 177 -85 2358 66 0 16 chr17 6323115 6323418 -79115062 + AluY SINE Alu 1 298 -13 728 202 0 16 chr17 6323634 6323763 -79114717 + FLAM_C SINE Alu 3 129 -4 27 0 0 0 chr17 6323764 6323791 -79114689 + AT_rich Low_complexity Low_complexity 1 27 0 225 304 44 22 chr17 6323986 6324121 -79114359 + MIR3 SINE MIR 61 198 -10 2383 82 0 13 chr17 6324793 6325108 -79113372 - AluY SINE Alu 0 311 1 266 204 19 0 chr17 6325527 6325581 -79112899 + MER91B DNA MER1_type 8 62 -128 284 305 42 0 chr17 6325883 6325978 -79112502 + MIR3 SINE MIR 110 208 0 2113 132 3 3 chr17 6326075 6326386 -79112094 + AluSx SINE Alu 1 311 -1 298 321 107 15 chr17 6326729 6326950 -79111530 + MIR SINE MIR 1 252 -10 183 42 0 0 chr17 6327008 6327032 -79111448 + (CA)n Simple_repeat Simple_repeat 1 24 0 263 200 14 71 chr17 6327688 6327758 -79110722 + L2 LINE L2 3206 3271 -1 23 54 0 0 chr17 6328383 6328420 -79110060 + GC_rich Low_complexity Low_complexity 1 37 0 180 125 36 18 chr17 6328549 6328605 -79109875 + (CCG)n Simple_repeat Simple_repeat 3 59 0 33 56 0 0 chr17 6328624 6328678 -79109802 + GC_rich Low_complexity Low_complexity 1 54 0 226 217 33 22 chr17 6328697 6328789 -79109691 + (CCCCG)n Simple_repeat Simple_repeat 4 96 0 476 275 26 96 chr17 6329695 6329924 -79108556 - L3 LINE CR1 -72 1505 1293 218 180 16 0 chr17 6330624 6330685 -79107795 + (TG)n Simple_repeat Simple_repeat 1 62 0 501 353 101 37 chr17 6331604 6332117 -79106363 + L3 LINE CR1 272 817 -760 1058 110 6 0 chr17 6332543 6332716 -79105764 + (TCC)n Simple_repeat Simple_repeat 2 175 0 937 140 17 3 chr17 6332749 6333103 -79105377 + CT-rich Low_complexity Low_complexity 1 359 0 2062 107 43 0 chr17 6333674 6333973 -79104507 - AluSx SINE Alu 0 312 1 449 366 33 15 chr17 6334080 6334416 -79104064 - L1MC4a LINE L1 -1911 5897 5556 1974 114 9 52 chr17 6334503 6334828 -79103652 + AluSq SINE Alu 1 311 -2 2162 94 44 0 chr17 6334976 6335273 -79103207 + AluSx SINE Alu 1 310 -2 2302 85 3 0 chr17 6335626 6335933 -79102547 + AluSg SINE Alu 1 308 -2 187 349 92 0 chr17 6336000 6336109 -79102371 - L3b LINE CR1 -123 1460 1342 2474 67 0 3 chr17 6336140 6336452 -79102028 + AluY SINE Alu 1 311 0 764 244 15 79 chr17 6336474 6336740 -79101740 - MIR SINE MIR 0 262 14 198 344 76 30 chr17 6336803 6336934 -79101546 + MIR3 SINE MIR 65 201 -7 265 324 57 45 chr17 6337733 6337909 -79100571 - MIR3 SINE MIR -29 179 2 1998 138 13 0 chr17 6338219 6338341 -79100139 + AluSx SINE Alu 1 120 -192 189 0 0 0 chr17 6338341 6338362 -79100118 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 1998 138 13 0 chr17 6338362 6338537 -79099943 + AluSx SINE Alu 120 302 -10 355 282 120 9 chr17 6339487 6339621 -79098859 + MIR SINE MIR 19 164 -60 2409 71 0 0 chr17 6339697 6340007 -79098473 - AluSg SINE Alu 0 310 1 2406 96 0 0 chr17 6341525 6341837 -79096643 - AluSx SINE Alu 0 312 1 965 279 56 37 chr17 6341926 6342303 -79096177 + MLT1K LTR MaLR 1 384 -204 269 310 95 0 chr17 6342695 6342811 -79095669 + MIR SINE MIR 92 218 -44 1127 96 30 0 chr17 6342977 6343170 -79095310 + AluSg/x SINE Alu 140 337 0 205 320 0 39 chr17 6343182 6343260 -79095220 + L2 LINE L2 3188 3262 -10 498 328 33 6 chr17 6343350 6343533 -79094947 + MIR SINE MIR 1 188 -74 559 243 40 20 chr17 6343820 6343968 -79094512 - MIR SINE MIR -2 260 110 212 220 9 119 chr17 6346602 6346711 -79091769 - L2 LINE L2 -1 3312 3216 677 239 55 0 chr17 6347306 6347469 -79091011 + MIR SINE MIR 91 262 0 2244 97 0 13 chr17 6349194 6349502 -79088978 + AluSx SINE Alu 1 304 -8 2553 50 0 7 chr17 6349656 6349955 -79088525 - AluY SINE Alu -14 297 1 288 0 0 0 chr17 6350239 6350271 -79088209 + (CA)n Simple_repeat Simple_repeat 2 33 0 5000 182 175 41 chr17 6350314 6351871 -79086609 - L1MC4 LINE L1 -216 7826 6032 1059 283 153 38 chr17 6351873 6353168 -79085312 - L1MEc LINE L1 -4074 2236 793 269 310 0 0 chr17 6353272 6353343 -79085137 - L1MEc LINE L1 -5488 631 561 2266 237 88 94 chr17 6353764 6354188 -79084292 - HAL1 LINE L1 -461 2046 1621 1529 153 42 0 chr17 6354188 6354429 -79084051 - AluJo SINE Alu -59 253 3 2266 237 88 94 chr17 6354429 6355242 -79083238 - HAL1 LINE L1 -886 1621 817 606 272 97 53 chr17 6355240 6355279 -79083201 - HAL1 LINE L1 -2150 357 321 * 2448 150 67 12 chr17 6355279 6355685 -79082795 + MSTA LTR MaLR 1 428 0 606 272 97 53 chr17 6355685 6355987 -79082493 - HAL1 LINE L1 -2186 321 1 2128 118 10 0 chr17 6356303 6356613 -79081867 + AluSx SINE Alu 12 312 0 679 316 51 40 chr17 6357079 6357548 -79080932 + HAL1 LINE L1 1 474 -2033 1031 267 119 38 chr17 6357549 6358070 -79080410 + HAL1 LINE L1 1585 2147 -360 1929 176 38 27 chr17 6358431 6358800 -79079680 + MLT1A2 LTR MaLR 1 373 -1 881 0 0 52 chr17 6360313 6360449 -79078031 + (GAA)n Simple_repeat Simple_repeat 1 129 0 194 315 61 88 chr17 6361186 6361516 -79076964 - L2 LINE L2 -26 3246 2926 906 253 36 44 chr17 6361897 6362261 -79076219 + L1ME2 LINE L1 4886 5246 -900 541 143 151 0 chr17 6362300 6362426 -79076054 + L1MB7 LINE L1 6040 6184 0 604 220 60 0 chr17 6362442 6362592 -79075888 + L1ME2 LINE L1 5232 5390 -756 349 227 77 56 chr17 6362593 6362945 -79075535 + AluSx SINE Alu 1 182 -120 1762 160 14 3 chr17 6362945 6363239 -79075241 + AluSx SINE Alu 1 297 -15 615 250 152 23 chr17 6363256 6363512 -79074968 + L1ME2 LINE L1 5440 5728 -2267 710 198 62 51 chr17 6363513 6363690 -79074790 + MLT1D LTR MaLR 305 483 -22 1041 190 144 9 chr17 6363743 6364035 -79074445 + L1ME2 LINE L1 5835 6164 0 344 266 53 39 chr17 6364073 6364280 -79074200 + L1MC4 LINE L1 7832 8041 -1 451 176 7 3 chr17 6364597 6364754 -79073726 + MER3 DNA MER1_type 1 203 -6 466 233 30 30 chr17 6364920 6365053 -79073427 + MIR3 SINE MIR 30 162 -46 243 266 76 38 chr17 6365327 6365406 -79073074 - MIR SINE MIR -147 115 34 223 170 0 21 chr17 6365688 6365735 -79072745 + (GGGTG)n Simple_repeat Simple_repeat 4 49 0 548 286 66 31 chr17 6366341 6366537 -79071943 + MIR SINE MIR 48 250 -12 263 256 0 12 chr17 6366571 6366657 -79071823 + L1P5 LINE L1 5346 5430 -721 289 286 29 0 chr17 6366754 6366859 -79071621 + L1MC4a LINE L1 5796 5903 -1905 368 273 11 0 chr17 6368886 6368974 -79069506 + MIR3 SINE MIR 79 167 -41 452 211 32 0 chr17 6369953 6370048 -79068432 - MER5A DNA MER1_type -80 109 12 421 220 214 29 chr17 6370125 6370298 -79068182 + HAL1 LINE L1 7 211 -2296 763 44 0 0 chr17 6370300 6370390 -79068090 - 5S rRNA rRNA -31 90 1 1214 268 82 31 chr17 6370390 6370901 -79067579 + HAL1 LINE L1 202 738 -1769 3306 216 65 22 chr17 6370908 6372142 -79066338 + L1ME2 LINE L1 4902 6333 -1 306 290 21 11 chr17 6372156 6372249 -79066231 + HAL1 LINE L1 776 869 -1638 1025 229 64 74 chr17 6372289 6372788 -79065692 + HAL1 LINE L1 971 1464 -1043 1961 199 43 21 chr17 6372832 6373250 -79065230 + L1MDa LINE L1 17 443 -6097 1366 165 30 33 chr17 6373280 6373583 -79064897 + L1MD1 LINE L1 5446 5747 -495 1087 121 0 0 chr17 6373583 6373724 -79064756 - AluJb SINE Alu -15 297 157 1971 172 135 31 chr17 6373726 6374179 -79064301 + L1MD1 LINE L1 5742 6241 -1 549 128 35 106 chr17 6374174 6374315 -79064165 + HAL1 LINE L1 1566 1696 -811 * 785 114 16 32 chr17 6374324 6374447 -79064033 + FLAM_C SINE Alu 19 139 -4 232 317 24 0 chr17 6374452 6374534 -79063946 + HAL1 LINE L1 1692 1775 -732 254 300 8 42 chr17 6375027 6375147 -79063333 + L1ME2 LINE L1 5966 6081 -83 326 376 143 8 chr17 6375257 6375515 -79062965 + L3 LINE CR1 1284 1576 -1 247 330 112 86 chr17 6377142 6377375 -79061105 + L2 LINE L2 2945 3183 -89 197 292 233 8 chr17 6378343 6378463 -79060017 + MIR3 SINE MIR 16 162 -46 372 233 68 53 chr17 6378923 6379056 -79059424 - L2 LINE L2 0 3313 3179 28 29 0 0 chr17 6379742 6379777 -79058703 + AT_rich Low_complexity Low_complexity 1 35 0 1708 134 4 8 chr17 6379845 6380099 -79058381 - AluJo SINE Alu 0 312 60 1907 146 31 0 chr17 6380642 6380929 -79057551 - AluJo SINE Alu -15 297 2 25 51 0 0 chr17 6381085 6381124 -79057356 + AT_rich Low_complexity Low_complexity 1 39 0 184 297 94 16 chr17 6381143 6381207 -79057273 + MIR SINE MIR 25 93 -169 277 345 75 51 chr17 6381662 6381924 -79056556 + L2 LINE L2 2444 2698 -616 2160 118 0 0 chr17 6381924 6382212 -79056268 + AluSq SINE Alu 1 288 -25 189 94 0 0 chr17 6382218 6382250 -79056230 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 277 345 75 51 chr17 6382250 6382313 -79056167 + L2 LINE L2 2702 2784 -530 997 285 142 34 chr17 6382313 6383900 -79054580 + L1ME3A LINE L1 4162 5929 -233 544 156 0 11 chr17 6384050 6384140 -79054340 + Tigger7 DNA MER2_type 22 110 -2377 2364 91 0 0 chr17 6384140 6384437 -79054043 - AluSx SINE Alu -15 297 1 1044 96 0 7 chr17 6384437 6384573 -79053907 - AluSq/x SINE Alu -177 135 1 1214 188 14 5 chr17 6384588 6384811 -79053669 + Tigger7 DNA MER2_type 201 425 -2062 1342 83 0 0 chr17 6384811 6384980 -79053500 + AluY SINE Alu 140 308 -3 330 248 102 80 chr17 6385839 6385881 -79052599 - MIR3 SINE MIR -52 156 116 2171 120 0 3 chr17 6385881 6386180 -79052300 + AluSx SINE Alu 1 298 -14 330 248 102 80 chr17 6386180 6386274 -79052206 - MIR3 SINE MIR -92 116 17 214 345 126 8 chr17 6386547 6386666 -79051814 - L2 LINE L2 -6 3266 3134 388 242 11 22 chr17 6386779 6386870 -79051610 + MER21B LTR ERV1 1 90 -773 3585 188 98 29 chr17 6386892 6387159 -79051321 + MER21B LTR ERV1 19 266 -597 2377 94 3 0 chr17 6387159 6387467 -79051013 + AluSp SINE Alu 1 309 -4 3585 188 98 29 chr17 6387467 6387988 -79050492 + MER21B LTR ERV1 266 861 -2 2281 111 0 3 chr17 6388285 6388583 -79049897 + AluSx SINE Alu 1 297 -15 2242 55 0 4 chr17 6388752 6389023 -79049457 - AluSg SINE Alu -40 270 1 2278 92 0 0 chr17 6389747 6390062 -79048418 + AluSx SINE Alu 1 315 0 2072 111 48 3 chr17 6390499 6390788 -79047692 + AluSx SINE Alu 1 302 -10 883 143 12 20 chr17 6390822 6391066 -79047414 + GA-rich Low_complexity Low_complexity 1 242 0 442 261 85 20 chr17 6391188 6391341 -79047139 + L1ME3A LINE L1 5989 6151 -19 1787 170 0 0 chr17 6391341 6391630 -79046850 - AluJo SINE Alu -19 293 5 342 185 46 0 chr17 6391758 6391823 -79046657 - HsTC2 DNA Tc2 -3 1895 1828 533 335 62 21 chr17 6391961 6392298 -79046182 + L1MC/D LINE L1 5292 5642 -2166 216 97 0 0 chr17 6392325 6392356 -79046124 + (TA)n Simple_repeat Simple_repeat 1 31 0 507 312 55 18 chr17 6395701 6395919 -79042561 - L2 LINE L2 -427 2887 2662 321 26 0 0 chr17 6396444 6396482 -79041998 + (CA)n Simple_repeat Simple_repeat 1 38 0 220 224 68 60 chr17 6396962 6397109 -79041371 - L3 LINE CR1 -16 1561 1338 2272 119 7 0 chr17 6397292 6397595 -79040885 + AluSx SINE Alu 1 305 -7 1705 149 91 0 chr17 6397632 6397908 -79040572 - AluSx SINE Alu -11 301 1 320 273 73 9 chr17 6398531 6398641 -79039839 + MER5C DNA MER1_type 5 121 -203 355 181 19 67 chr17 6398653 6398758 -79039722 + MER5C DNA MER1_type 225 324 0 255 345 6 6 chr17 6401330 6401504 -79036976 - L1ME LINE L1 -364 5757 5584 1494 156 0 13 chr17 6401803 6402055 -79036425 + AluSx SINE Alu 61 309 0 1059 211 97 20 chr17 6402067 6402365 -79036115 + L1MC4 LINE L1 5296 5616 -2192 342 186 72 10 chr17 6402370 6402467 -79036013 - MER50 LTR ERV1 -150 584 482 5326 201 71 76 chr17 6402467 6403792 -79034688 + L1MC4 LINE L1 5620 6951 -1044 225 0 0 0 chr17 6403792 6403817 -79034663 + (TTTA)n Simple_repeat Simple_repeat 4 28 0 1899 102 0 67 chr17 6403825 6404108 -79034372 - AluSx SINE Alu -48 264 1 5326 201 71 76 chr17 6404108 6405230 -79033250 + L1MC4 LINE L1 6958 7993 -2 2974 206 36 16 chr17 6405241 6405935 -79032545 + L1ME2 LINE L1 5431 6138 -26 2476 90 0 3 chr17 6405999 6406310 -79032170 - AluSx SINE Alu -2 310 1 622 321 62 35 chr17 6406555 6406895 -79031585 + L1MC4 LINE L1 7694 8042 0 201 74 0 0 chr17 6408406 6408433 -79030047 + (CA)n Simple_repeat Simple_repeat 2 28 0 440 258 101 22 chr17 6415524 6415703 -79022777 + MIR SINE MIR 49 256 -6 260 300 13 24 chr17 6416745 6416839 -79021641 - MIR SINE MIR -67 141 48 3001 220 131 12 chr17 6417007 6417968 -79020512 + L1MC4 LINE L1 6393 7467 -575 779 246 135 3 chr17 6417955 6418244 -79020236 + L1MD3 LINE L1 7657 7983 -12 * 4046 175 47 56 chr17 6418289 6419267 -79019213 + LTR5 LTR ERVK 1 969 0 271 233 0 0 chr17 6419271 6419331 -79019149 - MER113 DNA MER1_type? -458 63 4 443 262 248 0 chr17 6419342 6419483 -79018997 - MER5A DNA MER1_type 0 189 14 333 270 0 0 chr17 6419665 6419739 -79018741 + MIR SINE MIR 68 141 -121 581 267 154 60 chr17 6419816 6420296 -79018184 + L3 LINE CR1 726 1250 -327 545 272 28 11 chr17 6420356 6420536 -79017944 - Charlie8 DNA MER1_type -2187 230 48 529 267 191 11 chr17 6420571 6420844 -79017636 + L3 LINE CR1 1254 1575 -2 204 67 0 0 chr17 6421113 6421143 -79017337 + (T)n Simple_repeat Simple_repeat 1 30 0 295 234 0 0 chr17 6421250 6421314 -79017166 + MIR SINE MIR 185 248 -14 793 273 42 87 chr17 6421459 6421814 -79016666 - L2 LINE L2 -446 2868 2530 1969 51 0 8 chr17 6422810 6423047 -79015433 + AluY SINE Alu 67 301 -10 1079 267 89 23 chr17 6424841 6424875 -79013605 - L2 LINE L2 -17 3296 3266 2296 115 46 0 chr17 6424875 6425224 -79013256 - MER47A DNA MER2_type -1 365 1 1079 267 89 23 chr17 6425224 6425791 -79012689 - L2 LINE L2 -47 3266 2670 988 149 12 133 chr17 6425797 6426046 -79012434 + MER20 DNA MER1_type 1 219 0 205 103 0 0 chr17 6427407 6427436 -79011044 + MIR SINE MIR 224 252 -10 203 354 0 0 chr17 6427856 6427938 -79010542 + C-rich Low_complexity Low_complexity 6 87 0 209 103 0 0 chr17 6428228 6428257 -79010223 + MIR SINE MIR 224 252 -10 2367 100 0 0 chr17 6430098 6430389 -79008091 + AluSc SINE Alu 2 292 -17 430 284 2 24 chr17 6431161 6431313 -79007167 + MIR SINE MIR 16 160 -48 1824 146 3 48 chr17 6431326 6431635 -79006845 + AluJb SINE Alu 1 295 -17 446 0 19 0 chr17 6431701 6431755 -79006725 + (TC)n Simple_repeat Simple_repeat 2 56 0 205 214 233 10 chr17 6431926 6432029 -79006451 - MIR3 SINE MIR -75 133 8 205 284 0 15 chr17 6432951 6433018 -79005462 + G-rich Low_complexity Low_complexity 2 67 0 744 280 19 25 chr17 6433344 6433652 -79004828 - L1MEc LINE L1 -5966 430 44 980 149 14 0 chr17 6433907 6434114 -79004366 - AluSx SINE Alu 0 349 141 652 99 0 0 chr17 6434114 6434195 -79004285 - AluSx SINE Alu -231 82 2 455 178 140 46 chr17 6434342 6434598 -79003882 + LTR50 LTR ERVL 216 586 -209 280 244 99 45 chr17 6434614 6434815 -79003665 - L1M4 LINE L1 -747 5399 5188 421 187 75 0 chr17 6434948 6435055 -79003425 - MER112 DNA MER1_type -6 254 140 185 105 0 53 chr17 6435089 6435127 -79003353 + (GGAA)n Simple_repeat Simple_repeat 4 39 0 1945 91 76 0 chr17 6435141 6435433 -79003047 - AluSx SINE Alu 0 312 1 242 239 76 65 chr17 6436190 6436282 -79002198 - MIR3 SINE MIR -35 173 81 2406 94 0 0 chr17 6436407 6436705 -79001775 + AluSc SINE Alu 1 298 -11 2209 173 66 12 chr17 6436915 6437325 -79001155 + MSTB1 LTR MaLR 1 432 0 2157 118 0 37 chr17 6437553 6437874 -79000606 - AluSx SINE Alu -3 309 1 281 100 0 0 chr17 6437874 6437914 -79000566 - Alu SINE Alu -259 41 2 250 188 318 0 chr17 6437915 6438000 -79000480 - MER112 DNA MER1_type -141 119 8 1811 121 38 11 chr17 6438384 6438648 -78999832 - AluSx SINE Alu -41 271 1 680 245 159 14 chr17 6438674 6438882 -78999598 - MIR SINE MIR -10 252 15 248 254 208 25 chr17 6438953 6439150 -78999330 + L3 LINE CR1 1146 1378 -199 2334 98 0 0 chr17 6439181 6439476 -78999004 + AluSg SINE Alu 1 295 -15 2168 127 3 3 chr17 6440355 6440662 -78997818 - AluSg SINE Alu -3 307 1 553 258 108 27 chr17 6440667 6440853 -78997627 + L2 LINE L2 3113 3313 0 191 302 18 113 chr17 6440956 6441178 -78997302 + L2 LINE L2 2976 3176 -96 184 250 29 114 chr17 6441474 6441614 -78996866 - L2 LINE L2 -5 3267 3140 2384 97 13 0 chr17 6442195 6442494 -78995986 - AluSx SINE Alu -9 303 1 707 316 22 26 chr17 6442582 6442895 -78995585 - L1ME LINE L1 -426 5695 5384 186 194 14 97 chr17 6443923 6443978 -78994502 - MIR3 SINE MIR -6 202 153 2491 79 0 3 chr17 6443978 6444283 -78994197 - AluSg SINE Alu -6 304 1 186 194 14 97 chr17 6444283 6444299 -78994181 - MIR3 SINE MIR -55 153 137 245 234 65 19 chr17 6444329 6444436 -78994044 - L1ME4a LINE L1 -11 6110 5999 467 293 115 5 chr17 6444490 6444681 -78993799 - L1ME4a LINE L1 -218 5903 5692 2078 120 0 17 chr17 6444682 6444981 -78993499 + AluSx SINE Alu 1 294 -18 1018 125 0 80 chr17 6444983 6445159 -78993321 + AluSg/x SINE Alu 136 297 -13 318 266 126 14 chr17 6445159 6445302 -78993178 - L1ME4a LINE L1 -412 5709 5551 294 278 106 100 chr17 6445461 6445554 -78992926 - MIR SINE MIR -62 200 104 2419 74 0 35 chr17 6445554 6445865 -78992615 + AluSq SINE Alu 1 300 -13 294 278 106 100 chr17 6445865 6445951 -78992529 - MIR SINE MIR -158 104 20 302 259 82 83 chr17 6447231 6447428 -78991052 - MIR SINE MIR -37 225 35 183 284 198 0 chr17 6447784 6447865 -78990615 + L2 LINE L2 3162 3258 -14 183 294 103 0 chr17 6447975 6448043 -78990437 + L2 LINE L2 3149 3223 -49 216 97 0 0 chr17 6448098 6448129 -78990351 + (CA)n Simple_repeat Simple_repeat 1 31 0 494 262 70 60 chr17 6450499 6450791 -78987689 - L2 LINE L2 -69 3244 2947 1051 207 4 40 chr17 6450791 6451018 -78987462 + MER20 DNA MER1_type 1 219 0 180 0 0 0 chr17 6451075 6451095 -78987385 + (T)n Simple_repeat Simple_repeat 1 20 0 656 172 37 15 chr17 6451294 6451428 -78987052 + AluSg/x SINE Alu 135 271 -39 335 291 99 0 chr17 6451450 6451591 -78986889 + L1MC/D LINE L1 5655 5809 -1999 2396 47 0 7 chr17 6451593 6451871 -78986609 + AluY SINE Alu 17 292 -19 1598 216 100 10 chr17 6451899 6452381 -78986099 + L1ME2 LINE L1 5633 6157 -7 2005 65 4 0 chr17 6452402 6452649 -78985831 - AluY SINE Alu -63 248 1 2035 115 21 7 chr17 6453490 6453777 -78984703 - AluSg1 SINE Alu -18 291 1 259 183 133 0 chr17 6454484 6454544 -78983936 - MIR3 SINE MIR -29 179 112 810 282 103 46 chr17 6454771 6455335 -78983145 + MLT1L LTR MaLR 6 601 -14 223 337 32 11 chr17 6455356 6455451 -78983029 - MIR3 SINE MIR -102 106 10 441 315 22 28 chr17 6456312 6456490 -78981990 + MIR SINE MIR 20 196 -66 279 333 79 9 chr17 6458659 6458773 -78979707 - L3 LINE CR1 -1271 306 185 297 254 0 0 chr17 6459792 6459851 -78978629 - L2 LINE L2 -4 3309 3251 267 208 0 0 chr17 6460058 6460111 -78978369 + L2 LINE L2 3261 3313 0 420 245 7 0 chr17 6460171 6460311 -78978169 + L1ME4a LINE L1 5685 5828 -293 2435 76 0 3 chr17 6460392 6460683 -78977797 + AluSq SINE Alu 1 290 -23 686 269 108 11 chr17 6460824 6461110 -78977370 - L1ME4a LINE L1 -248 5873 5560 306 0 0 0 chr17 6461967 6462001 -78976479 + (A)n Simple_repeat Simple_repeat 1 34 0 442 336 36 38 chr17 6462868 6463285 -78975195 + L2 LINE L2 2097 2512 -802 373 310 66 10 chr17 6463377 6463574 -78974906 - L2 LINE L2 -1103 2211 2004 269 349 38 9 chr17 6463900 6464006 -78974474 + L2 LINE L2 3133 3241 -31 1368 105 4 0 chr17 6464011 6464261 -78974219 + (TGGA)n Simple_repeat Simple_repeat 1 251 0 226 296 102 11 chr17 6464261 6464349 -78974131 - L2 LINE L2 0 3313 3218 226 370 73 12 chr17 6464723 6464888 -78973592 - L2 LINE L2 0 3272 3098 468 0 0 0 chr17 6465084 6465136 -78973344 + (CA)n Simple_repeat Simple_repeat 2 53 0 629 313 103 17 chr17 6465165 6465698 -78972782 + L1ME4a LINE L1 5405 5983 -138 2271 92 24 3 chr17 6466242 6466534 -78971946 + AluSg SINE Alu 1 298 -12 2305 103 0 3 chr17 6467296 6467596 -78970884 - AluSx SINE Alu -13 299 1 830 292 4 26 chr17 6470487 6470661 -78967819 + MIR SINE MIR 35 204 -58 2117 122 0 25 chr17 6470661 6471027 -78967453 + AluSx SINE Alu 1 312 0 830 292 4 26 chr17 6471027 6471085 -78967395 + MIR SINE MIR 204 262 0 209 222 0 0 chr17 6471316 6471361 -78967119 + (TTA)n Simple_repeat Simple_repeat 2 46 0 2384 94 0 0 chr17 6471379 6471676 -78966804 - AluSx SINE Alu -15 297 1 1138 82 0 0 chr17 6471676 6471811 -78966669 - AluSq/x SINE Alu -178 135 1 231 224 167 32 chr17 6472642 6472798 -78965682 - L2 LINE L2 -238 3034 2858 2249 104 3 0 chr17 6473335 6473634 -78964846 + AluSg SINE Alu 1 300 -10 237 180 0 0 chr17 6476122 6476172 -78962308 + CT-rich Low_complexity Low_complexity 2 51 0 293 270 73 73 chr17 6476607 6476907 -78961573 + L2 LINE L2 2949 3248 -24 573 308 59 0 chr17 6477741 6477957 -78960523 + MIR SINE MIR 7 246 -16 204 214 0 0 chr17 6479259 6479301 -78959179 + CT-rich Low_complexity Low_complexity 1 42 0 383 185 50 8 chr17 6479385 6479504 -78958976 + GA-rich Low_complexity Low_complexity 3 126 0 21 0 0 0 chr17 6479525 6479546 -78958934 + AT_rich Low_complexity Low_complexity 1 21 0 957 155 0 0 chr17 6479573 6479816 -78958664 + L1PB3 LINE L1 5859 6151 -3 2166 112 17 0 chr17 6479877 6480173 -78958307 - AluSq SINE Alu -12 301 1 3036 173 17 6 chr17 6480335 6480877 -78957603 - MER6A DNA MER2_type 0 605 58 713 151 0 0 chr17 6480888 6481007 -78957473 - AluJb SINE Alu -4 308 190 370 152 0 80 chr17 6481008 6481083 -78957397 - MER6 DNA MER2_type -82 62 -1 2285 96 0 0 chr17 6481150 6481473 -78957007 - AluSc SINE Alu 0 323 1 781 201 69 0 chr17 6481723 6481897 -78956583 - MER20 DNA MER1_type 0 219 34 677 236 55 0 chr17 6482078 6482243 -78956237 + MER97b DNA MER1_type? 5 178 -875 225 0 0 0 chr17 6482668 6482693 -78955787 + (TG)n Simple_repeat Simple_repeat 2 26 0 21 57 0 0 chr17 6482851 6482886 -78955594 + AT_rich Low_complexity Low_complexity 1 35 0 264 59 0 0 chr17 6483334 6483368 -78955112 + (CA)n Simple_repeat Simple_repeat 2 35 0 825 122 0 20 chr17 6483392 6483641 -78954839 + (TG)n Simple_repeat Simple_repeat 1 243 0 305 221 126 11 chr17 6483977 6484072 -78954408 - MIR SINE MIR -62 146 41 23 68 0 0 chr17 6485348 6485392 -78953088 + GC_rich Low_complexity Low_complexity 1 44 0 218 307 13 0 chr17 6486152 6486227 -78952253 - L2 LINE L2 -11 3261 3186 766 143 33 91 chr17 6486669 6486800 -78951680 - L1MA6 LINE L1 0 6300 6184 2409 97 0 6 chr17 6486800 6487111 -78951369 - AluSx SINE Alu -3 309 1 766 143 33 91 chr17 6487111 6487189 -78951291 - L1MA6 LINE L1 -116 6184 6103 4754 54 29 2 chr17 6487337 6487966 -78950514 - L1PA8 LINE L1 0 6172 5527 564 292 75 18 chr17 6488010 6488236 -78950244 + MIR SINE MIR 21 259 -3 621 78 0 49 chr17 6488327 6488429 -78950051 + AluY SINE Alu 208 304 -7 596 273 116 29 chr17 6488553 6488898 -78949582 + L1M4 LINE L1 4495 4869 -1277 1315 181 24 74 chr17 6488912 6489037 -78949443 + Charlie2a DNA MER1_type 1011 1141 -1721 2410 77 0 48 chr17 6489037 6489349 -78949131 - AluSg SINE Alu -13 297 1 1315 181 24 74 chr17 6489349 6489644 -78948836 + Charlie2a DNA MER1_type 1141 1410 -1452 1855 174 106 26 chr17 6489663 6490088 -78948392 + LTR2B LTR ERV1 32 490 0 249 200 67 13 chr17 6490418 6490493 -78947987 + L1MD3 LINE L1 7905 7983 -12 22 0 0 0 chr17 6490555 6490577 -78947903 + AT_rich Low_complexity Low_complexity 1 22 0 2266 110 10 0 chr17 6490577 6490887 -78947593 - AluSq SINE Alu 0 313 1 1058 149 199 10 chr17 6490938 6491139 -78947341 + AluJb SINE Alu 1 239 -73 358 328 64 17 chr17 6491604 6491816 -78946664 - MLT1H LTR MaLR -150 264 65 1086 250 37 10 chr17 6492003 6492299 -78946181 + Charlie2a DNA MER1_type 1475 1778 -1084 705 145 0 0 chr17 6492299 6492416 -78946064 + FRAM SINE Alu 52 168 -8 25 0 0 0 chr17 6492563 6492588 -78945892 + AT_rich Low_complexity Low_complexity 1 25 0 2276 99 0 0 chr17 6493147 6493439 -78945041 - AluSc SINE Alu -16 293 2 3347 241 102 35 chr17 6493627 6494388 -78944092 + L2 LINE L2 1631 2340 -973 2100 106 29 4 chr17 6494388 6494662 -78943818 + AluSx SINE Alu 1 281 -31 3347 241 102 35 chr17 6494662 6494986 -78943494 + L2 LINE L2 2340 2641 -672 2493 115 20 54 chr17 6494986 6495229 -78943251 - MSTA LTR MaLR 0 428 178 2271 117 0 7 chr17 6495229 6495537 -78942943 - AluSg SINE Alu -4 306 1 2493 115 20 54 chr17 6495537 6495549 -78942931 - MSTA LTR MaLR -250 178 167 2530 71 0 3 chr17 6495549 6495858 -78942622 - AluY SINE Alu -3 308 1 2493 115 20 54 chr17 6495858 6496044 -78942436 - MSTA LTR MaLR -261 167 1 3347 241 102 35 chr17 6496044 6496284 -78942196 + L2 LINE L2 2641 2864 -449 2372 94 3 3 chr17 6496284 6496582 -78941898 + AluSx SINE Alu 1 298 -14 6874 45 7 2 chr17 6496583 6497773 -78940707 + L1PA6 LINE L1 4960 6152 -2 3347 241 102 35 chr17 6497773 6498023 -78940457 + L2 LINE L2 2863 3312 -1 300 137 0 0 chr17 6499354 6499405 -78939075 + (TA)n Simple_repeat Simple_repeat 2 52 0 22 35 0 0 chr17 6499413 6499442 -78939038 + AT_rich Low_complexity Low_complexity 1 29 0 203 232 62 0 chr17 6499444 6499556 -78938924 + (TA)n Simple_repeat Simple_repeat 2 120 0 910 220 11 0 chr17 6499556 6499733 -78938747 - AluJo SINE Alu -17 295 117 925 113 7 7 chr17 6499764 6499906 -78938574 - L1MB8 LINE L1 -11 6167 6026 354 137 0 0 chr17 6499906 6499957 -78938523 + L1 LINE L1 17 67 -7498 18819 165 48 38 chr17 6500111 6502070 -78936410 + L1 LINE L1 16 1954 -5611 340 60 0 8 chr17 6502070 6502121 -78936359 + MER4E LTR ERV1 653 692 -74 18819 165 48 38 chr17 6502121 6504867 -78933613 + L1 LINE L1 1954 4821 -2744 14525 157 94 84 chr17 6504870 6508925 -78929555 - HERVH LTR ERV1 -3619 4094 1 1226 171 129 89 chr17 6508932 6509358 -78929122 - LTR7 LTR ERV1 -7 443 1 3012 211 8 3 chr17 6509358 6510016 -78928464 + L1 LINE L1 5755 6415 -1150 933 88 0 0 chr17 6510017 6510130 -78928350 + AluY SINE Alu 1 113 -198 1824 186 121 38 chr17 6510347 6510794 -78927686 - LTR2B LTR ERV1 0 490 7 3208 246 192 42 chr17 6510813 6512650 -78925830 - HAL1 LINE L1 -145 2362 252 1895 251 76 44 chr17 6512660 6512978 -78925502 + L2 LINE L2 2286 2592 -721 2016 73 4 0 chr17 6512978 6513238 -78925242 + L1PA8 LINE L1 5912 6172 0 1895 251 76 44 chr17 6513238 6513847 -78924633 + L2 LINE L2 2592 3254 -59 5731 137 9 17 chr17 6513849 6515195 -78923285 + L1MA3 LINE L1 4333 5668 -637 3749 204 53 4 chr17 6515198 6515894 -78922586 + L1PA12 LINE L1 1 730 -6851 * 5647 144 24 19 chr17 6515890 6516839 -78921641 + L1PA13 LINE L1 4379 5342 -821 2427 96 0 0 chr17 6516839 6517151 -78921329 - AluSx SINE Alu 0 312 1 5647 144 24 19 chr17 6517151 6517958 -78920522 + L1PA13 LINE L1 5342 6143 -20 4243 109 15 14 chr17 6517972 6518466 -78920014 + L1MA3 LINE L1 5652 6152 -153 2274 67 3 11 chr17 6518466 6518792 -78919688 + AluY SINE Alu 1 324 0 4243 109 15 14 chr17 6518792 6518947 -78919533 + L1MA3 LINE L1 6152 6305 0 1911 221 81 109 chr17 6518996 6519447 -78919033 + L1ME LINE L1 503 965 -5575 642 151 0 0 chr17 6519447 6519553 -78918927 + L1MA4 LINE L1 6180 6285 -15 1911 221 81 109 chr17 6519553 6519602 -78918878 + L1ME LINE L1 965 1014 -5526 2355 91 0 0 chr17 6519602 6519900 -78918580 - AluSg SINE Alu -12 298 1 1911 221 81 109 chr17 6519900 6520913 -78917567 + L1ME LINE L1 1014 1970 -4570 1988 152 3 0 chr17 6520913 6521232 -78917248 + AluSx SINE Alu 1 312 0 300 214 18 0 chr17 6521325 6521381 -78917099 + MER77 LTR ERV1 292 348 -257 555 238 26 16 chr17 6521420 6521609 -78916871 + L1ME LINE L1 2397 2587 -3953 297 0 0 0 chr17 6522348 6522381 -78916099 + (CA)n Simple_repeat Simple_repeat 2 34 0 600 284 26 0 chr17 6522991 6523146 -78915334 + MER63 DNA MER1_type 1 785 -277 2341 110 0 0 chr17 6523150 6523489 -78914991 + AluSg1 SINE Alu 1 339 0 1265 219 64 0 chr17 6523841 6524106 -78914374 + AluJo SINE Alu 1 282 -30 2373 80 7 3 chr17 6526089 6526391 -78912089 - AluY SINE Alu -8 303 1 2482 86 0 0 chr17 6526392 6526693 -78911787 - AluSg SINE Alu -9 301 1 200 326 184 0 chr17 6526884 6526982 -78911498 + MIR SINE MIR 15 130 -132 205 248 171 19 chr17 6527030 6527135 -78911345 + MIR SINE MIR 116 236 -26 2296 93 3 37 chr17 6528884 6529208 -78909272 - AluSq SINE Alu 0 313 1 32 43 0 0 chr17 6529509 6529555 -78908925 + AT_rich Low_complexity Low_complexity 1 46 0 575 209 25 61 chr17 6529580 6529776 -78908704 - L1ME1 LINE L1 -6 6160 5972 252 0 0 0 chr17 6531668 6531696 -78906784 + (TG)n Simple_repeat Simple_repeat 2 29 0 2486 76 0 0 chr17 6532106 6532407 -78906073 + AluSg SINE Alu 1 301 -9 2408 72 3 0 chr17 6532911 6533202 -78905278 + AluSp SINE Alu 1 292 -21 243 0 0 0 chr17 6533759 6533786 -78904694 + (CACAA)n Simple_repeat Simple_repeat 3 29 0 295 221 147 22 chr17 6535040 6535176 -78903304 + Charlie8 DNA MER1_type 84 236 -2181 2081 107 4 4 chr17 6535978 6536283 -78902197 + AluSg SINE Alu 1 305 0 803 214 77 72 chr17 6536384 6536785 -78901695 - L1MC5 LINE L1 -54 7907 7505 24 0 0 0 chr17 6536995 6537019 -78901461 + AT_rich Low_complexity Low_complexity 1 24 0 7378 31 0 0 chr17 6537032 6538395 -78900085 - L1PA4 LINE L1 0 6155 4769 268 274 21 0 chr17 6538859 6538954 -78899526 + MIR SINE MIR 47 143 -119 623 256 53 19 chr17 6539021 6539228 -78899252 - MIR SINE MIR 0 262 49 3735 45 0 0 chr17 6539430 6539877 -78898603 - L1PA8 LINE L1 -5 6167 5721 422 302 105 12 chr17 6540754 6540926 -78897554 + MIR3 SINE MIR 19 206 -2 460 252 24 155 chr17 6541659 6542040 -78896440 + L2 LINE L2 2904 3234 -38 15661 152 15 24 chr17 6544152 6547270 -78891210 + L1MA3 LINE L1 2950 6007 -1717 225 0 0 0 chr17 6547270 6547295 -78891185 + (TG)n Simple_repeat Simple_repeat 2 26 0 15661 152 15 24 chr17 6547295 6548822 -78889658 + L1MA3 LINE L1 6007 7547 -177 1812 220 74 16 chr17 6549395 6549744 -78888736 - L1MB5 LINE L1 0 6174 5794 2051 84 0 15 chr17 6549744 6550017 -78888463 - AluSx SINE Alu -8 304 36 1812 220 74 16 chr17 6550017 6550099 -78888381 - L1MB5 LINE L1 -380 5794 5718 529 215 8 24 chr17 6550099 6550232 -78888248 + MER5A DNA MER1_type 4 119 -59 215 267 0 80 chr17 6550264 6550339 -78888141 - MER5B DNA MER1_type -4 174 106 227 198 264 24 chr17 6550512 6550604 -78887876 + MIR SINE MIR 40 150 -62 562 247 9 92 chr17 6550624 6550851 -78887629 + L2 LINE L2 1422 1629 -1685 2688 243 171 47 chr17 6551089 6551552 -78886928 + L2 LINE L2 1699 2104 -1209 2367 92 0 0 chr17 6551552 6551857 -78886623 + AluY SINE Alu 1 305 -6 2688 243 171 47 chr17 6551857 6552731 -78885749 + L2 LINE L2 2104 3186 -127 1412 222 66 36 chr17 6552754 6553255 -78885225 - HAL1 LINE L1 -78 2429 1914 703 222 30 30 chr17 6553298 6553465 -78885015 - HAL1 LINE L1 -706 1801 1635 464 208 0 28 chr17 6553519 6553625 -78884855 + L1MA5 LINE L1 6198 6300 0 302 374 17 0 chr17 6553812 6553927 -78884553 + HAL1 LINE L1 1464 1580 -927 336 287 93 20 chr17 6553958 6554108 -78884372 - L1MC5 LINE L1 -152 7809 7649 267 31 0 0 chr17 6554154 6554186 -78884294 + (CTG)n Simple_repeat Simple_repeat 2 33 0 2149 135 3 3 chr17 6554531 6554843 -78883637 - AluSx SINE Alu 0 312 1 1551 247 74 108 chr17 6554883 6555702 -78882778 - L1MEd LINE L1 -744 1746 904 994 100 20 0 chr17 6555702 6555852 -78882628 + L1MA7 LINE L1 6135 6287 -4 1551 247 74 108 chr17 6555852 6556438 -78882042 - L1MEd LINE L1 -1586 904 300 1233 186 138 63 chr17 6556528 6556862 -78881618 - MLT1A1 LTR MaLR -6 359 1 324 248 71 9 chr17 6556893 6557006 -78881474 - L1MEd LINE L1 -5981 138 19 208 368 66 0 chr17 6557623 6557729 -78880751 + L2 LINE L2 3160 3272 0 * 316 295 57 0 chr17 6557721 6557826 -78880654 - MIR3 SINE MIR -30 178 68 219 258 297 45 chr17 6557926 6558081 -78880399 - MIR SINE MIR 0 262 69 688 142 219 19 chr17 6558643 6558798 -78879682 + MER53 DNA DNA 1 186 -3 2292 99 3 3 chr17 6558892 6559196 -78879284 - AluSx SINE Alu -7 305 2 6660 176 19 16 chr17 6559727 6561009 -78877471 + L1P4 LINE L1 3870 5155 -991 1169 139 0 0 chr17 6561005 6561185 -78877295 + L1P4 LINE L1 5603 5782 -383 * 949 103 0 0 chr17 6561185 6561311 -78877169 + AluSq/x SINE Alu 1 126 -187 218 316 18 44 chr17 6561506 6561620 -78876860 + MIR SINE MIR 151 261 -1 239 295 259 7 chr17 6562064 6562203 -78876277 + MIR3 SINE MIR 28 201 -7 331 262 144 55 chr17 6562695 6562897 -78875583 + MIR SINE MIR 12 231 -31 296 262 10 29 chr17 6563851 6563954 -78874526 - MIR SINE MIR -41 221 121 400 184 41 51 chr17 6563962 6564060 -78874420 + MIR SINE MIR 38 134 -128 2286 103 3 22 chr17 6565164 6565483 -78872997 + AluSq SINE Alu 1 313 0 324 243 10 29 chr17 6566537 6566640 -78871840 - MIR SINE MIR -41 221 121 367 179 44 45 chr17 6566648 6566746 -78871734 + MIR SINE MIR 39 135 -73 375 297 125 1 chr17 6567071 6567282 -78871198 + MIR SINE MIR 16 250 -12 2055 115 44 0 chr17 6567394 6567689 -78870791 + AluSq SINE Alu 3 310 -3 821 196 0 19 chr17 6567709 6567778 -78870702 - AluJb SINE Alu 0 361 292 1030 93 6 27 chr17 6567778 6567961 -78870519 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 821 196 0 19 chr17 6567961 6568098 -78870382 - AluJb SINE Alu -69 292 158 190 163 0 47 chr17 6568115 6568158 -78870322 - MIR SINE MIR 0 262 222 240 308 0 0 chr17 6568207 6568272 -78870208 - L2 LINE L2 -207 3065 3001 244 340 100 30 chr17 6568445 6568716 -78869764 - L2 LINE L2 -646 2668 2379 2131 123 13 3 chr17 6568736 6569037 -78869443 + AluSx SINE Alu 1 304 -8 331 88 0 32 chr17 6569441 6569504 -78868976 - FAM SINE Alu -8 171 116 2905 39 0 0 chr17 6569524 6569880 -78868600 - L1P LINE L1 -803 5343 4988 993 27 0 0 chr17 6569880 6569985 -78868495 + L1PA5 LINE L1 6040 6149 -5 545 284 142 0 chr17 6571191 6571402 -78867078 + MIR SINE MIR 10 250 -12 344 274 103 17 chr17 6571483 6571600 -78866880 + MIR SINE MIR 19 145 -63 317 313 45 0 chr17 6571660 6571772 -78866708 - MIR SINE MIR -123 139 23 2015 136 4 0 chr17 6572206 6572486 -78865994 + AluSx SINE Alu 1 281 -31 6014 65 22 12 chr17 6572486 6573243 -78865237 + MER4E LTR ERV1 2 766 0 38165 48 0 1 chr17 6573714 6578327 -78860153 - L1P LINE L1 -1535 4611 2 32 26 0 0 chr17 6578483 6578522 -78859958 + AT_rich Low_complexity Low_complexity 1 39 0 364 309 0 0 chr17 6578619 6578703 -78859777 + Cheshire DNA MER1_type 1 84 -2336 6060 131 45 38 chr17 6578704 6578936 -78859544 - L1MC2 LINE L1 -12 6332 6103 2182 130 10 0 chr17 6578936 6579244 -78859236 - AluSx SINE Alu -1 311 1 6060 131 45 38 chr17 6579244 6580149 -78858331 - L1MC2 LINE L1 -241 6103 5188 1064 248 90 3 chr17 6580152 6580442 -78858038 + Cheshire DNA MER1_type 77 391 -2029 2309 81 0 26 chr17 6580446 6580755 -78857725 - AluSq SINE Alu -12 301 1 225 0 0 0 chr17 6580938 6580963 -78857517 + (CAT)n Simple_repeat Simple_repeat 2 26 0 252 0 0 0 chr17 6581020 6581048 -78857432 + (TG)n Simple_repeat Simple_repeat 1 28 0 668 280 92 5 chr17 6581055 6581262 -78857218 - MIR SINE MIR -30 232 8 315 220 0 0 chr17 6581529 6581588 -78856892 - MER63 DNA MER1_type -89 747 689 2206 137 49 22 chr17 6581674 6582039 -78856441 + THE1C LTR MaLR 1 375 0 519 254 35 7 chr17 6582948 6583090 -78855390 - MIR SINE MIR -39 223 78 375 160 80 0 chr17 6583090 6583190 -78855290 + L1MC4 LINE L1 6982 7089 -953 510 231 162 48 chr17 6583219 6583265 -78855215 + L1ME3A LINE L1 5841 5880 -290 369 0 0 0 chr17 6583265 6583306 -78855174 + (CA)n Simple_repeat Simple_repeat 2 42 0 510 231 162 48 chr17 6583306 6583488 -78854992 + L1ME3A LINE L1 5880 6095 -75 495 184 10 19 chr17 6583495 6583598 -78854882 + MLT1E LTR MaLR 10 111 -482 6319 52 0 3 chr17 6584965 6585697 -78852783 - L1PA6 LINE L1 -5 6149 5420 22 0 0 0 chr17 6585731 6585753 -78852727 + AT_rich Low_complexity Low_complexity 1 22 0 2242 94 3 0 chr17 6585828 6586114 -78852366 + AluSp SINE Alu 5 291 -22 188 139 0 23 chr17 6586129 6586172 -78852308 + (TAA)n Simple_repeat Simple_repeat 3 44 0 329 248 256 15 chr17 6586185 6586318 -78852162 - MIR SINE MIR -19 243 79 638 240 69 6 chr17 6586423 6586598 -78851882 + MIR SINE MIR 63 248 -14 319 371 68 37 chr17 6586781 6587075 -78851405 - L2 LINE L2 -385 2929 2627 1422 212 156 47 chr17 6587272 6587702 -78850778 + MLT1J LTR MaLR 28 504 -7 231 250 0 0 chr17 6588343 6588403 -78850077 - HAL1 LINE L1 0 2507 2448 2291 77 0 3 chr17 6588433 6588718 -78849762 - AluY SINE Alu -27 284 1 596 221 107 50 chr17 6588737 6589035 -78849445 - HAL1 LINE L1 -182 2325 2011 24 0 0 0 chr17 6589101 6589125 -78849355 + AT_rich Low_complexity Low_complexity 1 24 0 2275 207 53 14 chr17 6589323 6589873 -78848607 - HAL1 LINE L1 -542 1965 1395 2206 154 30 14 chr17 6589915 6590284 -78848196 + THE1C LTR MaLR 1 375 0 3315 117 190 3 chr17 6590287 6590861 -78847619 + THE1C-int LTR MaLR 4 684 -896 1783 166 3 3 chr17 6590873 6591157 -78847323 - AluJo SINE Alu -18 294 11 1607 238 107 46 chr17 6591157 6591809 -78846671 - HAL1 LINE L1 -1226 1281 590 396 306 65 36 chr17 6591914 6592162 -78846318 - HAL1 LINE L1 -2139 368 114 272 333 67 0 chr17 6592245 6592335 -78846145 - HAL1 LINE L1 -2396 111 16 255 308 143 42 chr17 6592393 6592546 -78845934 + L2 LINE L2 1860 1996 -1318 2525 75 0 0 chr17 6592546 6592852 -78845628 - AluY SINE Alu -5 306 1 255 308 143 42 chr17 6592852 6593033 -78845447 + L2 LINE L2 1996 2228 -1086 197 308 55 22 chr17 6593406 6593497 -78844983 + L2 LINE L2 3177 3270 -2 525 341 64 47 chr17 6593506 6594022 -78844458 - L2 LINE L2 -898 2416 1892 221 305 98 12 chr17 6594123 6594205 -78844275 + L2 LINE L2 3141 3229 -43 2601 254 70 35 chr17 6594212 6595348 -78843132 - L1ME3A LINE L1 0 6170 5074 477 0 0 0 chr17 6595348 6595401 -78843079 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 2601 254 70 35 chr17 6595401 6595430 -78843050 - L1ME3A LINE L1 -1096 5074 5047 2271 95 0 0 chr17 6595430 6595725 -78842755 - AluY SINE Alu -16 295 1 2601 254 70 35 chr17 6595725 6595988 -78842492 - L1ME3A LINE L1 -1123 5047 4794 2441 75 3 7 chr17 6595988 6596293 -78842187 - AluSq SINE Alu -9 304 1 2601 254 70 35 chr17 6596293 6596577 -78841903 - L1ME3A LINE L1 -1376 4794 4393 2203 123 0 0 chr17 6596671 6596972 -78841508 - AluY SINE Alu -8 303 3 1026 265 52 34 chr17 6597124 6597449 -78841031 + MER102b DNA MER1_type 11 341 0 2099 115 7 0 chr17 6597600 6597886 -78840594 + AluSx SINE Alu 1 288 -24 818 192 0 0 chr17 6598045 6598175 -78840305 + MER2 DNA MER2_type 6 135 -210 329 131 16 0 chr17 6598177 6598238 -78840242 + CT-rich Low_complexity Low_complexity 2 63 0 751 216 0 8 chr17 6598242 6598376 -78840104 - FLAM_A SINE Alu 0 133 1 612 83 0 0 chr17 6598378 6598462 -78840018 + MER2 DNA MER2_type 127 210 -135 198 297 142 39 chr17 6598555 6598710 -78839770 + L2 LINE L2 3143 3313 0 2087 203 115 12 chr17 6599182 6599694 -78838786 - L1ME3A LINE L1 -8 6162 5598 285 182 0 0 chr17 6599729 6599784 -78838696 + GA-rich Low_complexity Low_complexity 3 57 0 208 299 169 40 chr17 6599942 6600267 -78838213 - L3 LINE CR1 -162 1415 1049 293 301 96 15 chr17 6600694 6600830 -78837650 + MIR3 SINE MIR 29 175 -33 288 311 60 11 chr17 6601036 6601219 -78837261 + HAL1 LINE L1 1158 1349 -1158 828 175 19 31 chr17 6601278 6601438 -78837042 + MER2 DNA MER2_type 16 173 -172 188 46 0 161 chr17 6601477 6601564 -78836916 + (CAATA)n Simple_repeat Simple_repeat 2 74 0 369 250 0 0 chr17 6601660 6601736 -78836744 + MER2 DNA MER2_type 269 344 -1 421 315 160 18 chr17 6601841 6602184 -78836296 + HAL1 LINE L1 1526 1917 -590 601 183 76 8 chr17 6602286 6602417 -78836063 + FRAM SINE Alu 11 150 -26 22 35 0 0 chr17 6602417 6602446 -78836034 + AT_rich Low_complexity Low_complexity 1 29 0 869 154 0 0 chr17 6602486 6602616 -78835864 + FLAM_C SINE Alu 1 130 -3 263 310 70 20 chr17 6602866 6602966 -78835514 - L2 LINE L2 0 3272 3168 982 223 45 67 chr17 6602971 6603400 -78835080 + L1MC4a LINE L1 5593 6016 -105 446 296 133 26 chr17 6604689 6604915 -78833565 - MIR SINE MIR -4 258 9 791 218 19 28 chr17 6605563 6605774 -78832706 + L1MC4a LINE L1 5673 5881 -1927 278 53 0 26 chr17 6605784 6605822 -78832658 - FRAM/FAM SINE Alu -99 67 31 250 271 181 45 chr17 6605863 6606084 -78832396 + L1MC4a LINE L1 5918 6168 -1640 27 0 0 0 chr17 6606090 6606117 -78832363 + AT_rich Low_complexity Low_complexity 1 27 0 1432 153 12 81 chr17 6606660 6606980 -78831500 - AluJo SINE Alu -14 298 1 448 242 67 17 chr17 6606980 6607100 -78831380 + MIR SINE MIR 77 202 -60 1509 117 36 97 chr17 6607100 6607320 -78831160 - THE1C LTR MaLR 0 375 178 2408 96 0 0 chr17 6607320 6607621 -78830859 + AluSx SINE Alu 1 301 -11 1509 117 36 97 chr17 6607621 6607708 -78830772 - THE1C LTR MaLR -197 178 87 22 0 0 0 chr17 6608034 6608056 -78830424 + AT_rich Low_complexity Low_complexity 1 22 0 760 232 16 20 chr17 6608155 6608401 -78830079 - L1ME LINE L1 -5054 1016 772 1694 180 7 7 chr17 6608714 6609003 -78829477 - AluJb SINE Alu -23 289 1 22 35 0 0 chr17 6609389 6609418 -78829062 + AT_rich Low_complexity Low_complexity 1 29 0 2349 90 3 0 chr17 6609896 6610206 -78828274 + AluY SINE Alu 1 311 0 1189 249 28 82 chr17 6611162 6611732 -78826748 - MER34 LTR ERV1 -3 539 1 22 0 0 0 chr17 6612018 6612040 -78826440 + AT_rich Low_complexity Low_complexity 1 22 0 563 268 41 36 chr17 6612600 6612794 -78825686 - MIR SINE MIR -48 214 20 377 197 0 0 chr17 6613257 6613328 -78825152 - MIR SINE MIR -34 228 158 962 272 75 80 chr17 6613502 6614327 -78824153 + HAL1 LINE L1 2 1019 -1488 6891 53 10 0 chr17 6614333 6615671 -78822809 - L1PA7 LINE L1 0 6154 4801 2052 77 50 0 chr17 6615671 6615932 -78822548 + AluY SINE Alu 21 294 -17 13350 103 4 28 chr17 6615932 6618390 -78820090 - L1P3 LINE L1 -4009 2452 7 2420 145 36 19 chr17 6618892 6619089 -78819391 + MSTA LTR MaLR 1 193 -235 2570 144 44 2 chr17 6619089 6619500 -78818980 - MSTA LTR MaLR 0 428 1 2420 145 36 19 chr17 6619500 6619723 -78818757 + MSTA LTR MaLR 193 428 0 551 293 131 52 chr17 6620845 6620960 -78817520 - HAL1 LINE L1 -1709 798 693 2211 78 27 10 chr17 6620960 6621256 -78817224 - AluY SINE Alu -10 301 1 551 293 131 52 chr17 6621256 6621638 -78816842 - HAL1 LINE L1 -1814 693 262 2005 176 40 62 chr17 6621734 6621814 -78816666 - MSTB LTR MaLR 0 426 346 2083 87 4 0 chr17 6621814 6622080 -78816400 + AluSc SINE Alu 35 301 -8 2005 176 40 62 chr17 6622080 6622419 -78816061 - MSTB LTR MaLR -80 346 16 24 0 0 0 chr17 6622434 6622458 -78816022 + AT_rich Low_complexity Low_complexity 1 24 0 874 275 48 34 chr17 6622469 6622883 -78815597 + L1PBa LINE L1 135 554 -6309 904 226 43 4 chr17 6622909 6623139 -78815341 + L1PBa LINE L1 612 850 -6013 266 214 18 0 chr17 6623368 6623424 -78815056 - MER89-int LTR ERV1 -2166 2481 2425 641 147 121 17 chr17 6623437 6623553 -78814927 - FLAM_C SINE Alu -14 129 2 481 211 0 90 chr17 6624045 6624178 -78814302 - MER89-int LTR ERV1 -4076 860 740 385 304 52 55 chr17 6624622 6624911 -78813569 - MER89-int LTR ERV1 -3156 3645 3358 4142 133 44 5 chr17 6625613 6626250 -78812230 - L1PA15 LINE L1 -22 6143 5482 606 280 92 5 chr17 6626644 6626851 -78811629 + MIR SINE MIR 8 232 -30 252 0 0 0 chr17 6626858 6626886 -78811594 + (CA)n Simple_repeat Simple_repeat 1 28 0 225 0 0 0 chr17 6626943 6626968 -78811512 + (ATG)n Simple_repeat Simple_repeat 2 26 0 2648 24 7 0 chr17 6627151 6627447 -78811033 + AluY SINE Alu 1 298 -13 1151 151 5 11 chr17 6627452 6627638 -78810842 - Tigger3(Golem) DNA MER2_type -284 2745 2561 715 115 10 0 chr17 6627639 6627743 -78810737 + AluSg SINE Alu 2 106 -204 16021 215 27 29 chr17 6627843 6631624 -78806856 - L1PA13 LINE L1 -826 5971 2185 890 109 0 51 chr17 6631624 6631761 -78806719 - FLAM_C SINE Alu -3 130 1 16021 215 27 29 chr17 6631761 6632057 -78806423 - L1PA13 LINE L1 -4612 2185 1890 1756 123 88 0 chr17 6632057 6632206 -78806274 - AluSg1 SINE Alu -24 285 151 360 0 0 0 chr17 6632206 6632246 -78806234 + (TG)n Simple_repeat Simple_repeat 2 41 0 1756 123 88 0 chr17 6632246 6632356 -78806124 - AluSg1 SINE Alu -158 151 3 16021 215 27 29 chr17 6632356 6633029 -78805451 - L1PA13 LINE L1 -4907 1890 1180 1070 297 58 52 chr17 6633008 6633530 -78804950 - L1PA13 LINE L1 -5818 969 445 * 810 203 0 7 chr17 6633527 6633680 -78804800 - L1PA13 LINE L1 -6632 155 4 * 1350 226 69 64 chr17 6633777 6634359 -78804121 + LTR24B LTR ERV1 1 635 0 1104 262 46 40 chr17 6634359 6634959 -78803521 + LTR24B-int LTR ERV1 2 745 -4378 180 179 0 0 chr17 6635268 6635307 -78803173 + CT-rich Low_complexity Low_complexity 5 43 0 324 307 17 40 chr17 6635973 6636149 -78802331 + MER89-int LTR ERV1 3480 3651 -3440 1810 144 17 10 chr17 6636237 6636535 -78801945 - AluJo SINE Alu -12 300 1 327 277 43 11 chr17 6636605 6636699 -78801781 + MER89-int LTR ERV1 2538 2634 -4167 2524 4 0 15 chr17 6636866 6637140 -78801340 + AluYb8 SINE Alu 20 289 -29 2080 96 0 31 chr17 6637383 6637674 -78800806 + AluSq SINE Alu 1 282 -31 180 0 0 0 chr17 6637675 6637695 -78800785 + (TGAA)n Simple_repeat Simple_repeat 3 22 0 205 182 0 0 chr17 6638386 6638419 -78800061 + polypurine Low_complexity Low_complexity 1 33 0 469 118 0 0 chr17 6638842 6638910 -78799570 + LTR24B LTR ERV1 501 568 -8 2353 92 0 3 chr17 6639127 6639422 -78799058 - AluSc SINE Alu -15 294 1 3689 198 106 15 chr17 6639422 6640229 -78798251 - L1MC2 LINE L1 -13 6331 5428 1707 167 23 13 chr17 6640229 6640535 -78797945 - AluJb SINE Alu -3 309 1 3689 198 106 15 chr17 6640535 6640651 -78797829 - L1MC2 LINE L1 -916 5428 5324 2402 92 0 0 chr17 6640651 6640956 -78797524 - AluSx SINE Alu -7 305 1 1016 125 60 50 chr17 6640981 6641181 -78797299 - L1MB2 LINE L1 -2 6169 5968 844 172 27 59 chr17 6641181 6641367 -78797113 - LTR57 LTR ERVL 0 411 232 2400 71 0 7 chr17 6641411 6641706 -78796774 - AluY SINE Alu -18 293 1 990 92 48 121 chr17 6641772 6641979 -78796501 - L1MA2 LINE L1 -18 6286 6095 2517 65 0 10 chr17 6641992 6642301 -78796179 - AluY SINE Alu -5 306 1 1415 129 37 0 chr17 6642301 6642518 -78795962 - LTR57 LTR ERVL -186 225 1 2438 106 0 0 chr17 6644101 6644413 -78794067 + AluSx SINE Alu 1 312 0 193 305 98 12 chr17 6644782 6644864 -78793616 + L2 LINE L2 3141 3229 -43 408 72 9 0 chr17 6644902 6644968 -78793512 - MER51A LTR ERV1 -308 69 1 238 278 130 17 chr17 6645000 6645115 -78793365 + L1M4 LINE L1 4902 5029 -1117 25 31 0 0 chr17 6645303 6645335 -78793145 + AT_rich Low_complexity Low_complexity 1 32 0 1524 108 33 21 chr17 6645532 6645879 -78792601 + LTR46 LTR ERV1 1 404 -56 354 23 0 0 chr17 6645883 6645926 -78792554 + (TC)n Simple_repeat Simple_repeat 2 44 0 2382 94 3 0 chr17 6645929 6646236 -78792244 - AluSp SINE Alu -5 308 1 563 82 0 0 chr17 6646245 6646317 -78792163 - MER4E LTR ERV1 -282 497 426 1934 148 26 58 chr17 6646317 6646695 -78791785 + MER66B LTR ERV1 1 366 -120 1636 112 13 0 chr17 6646701 6646925 -78791555 + AluSg/x SINE Alu 78 304 -8 1683 171 27 0 chr17 6646932 6647224 -78791256 + MER4D LTR ERV1 604 903 0 320 123 62 0 chr17 6647629 6647694 -78790786 + L1MC2 LINE L1 6267 6335 -9 7928 21 0 2 chr17 6648127 6649534 -78788946 + L1PA3 LINE L1 4752 6155 0 24 32 0 0 chr17 6649934 6649965 -78788515 + AT_rich Low_complexity Low_complexity 1 31 0 387 172 0 0 chr17 6650605 6650669 -78787811 - MSTD LTR MaLR 0 396 333 2253 92 3 0 chr17 6650677 6650959 -78787521 + AluY SINE Alu 2 284 -27 1262 234 97 6 chr17 6650979 6651299 -78787181 - MSTD LTR MaLR -47 349 1 21 36 0 0 chr17 6651987 6652015 -78786465 + AT_rich Low_complexity Low_complexity 1 28 0 1496 159 90 34 chr17 6652164 6652594 -78785886 + LTR54 LTR ERV1 1 493 -5 1184 268 45 59 chr17 6652993 6653486 -78784994 - LTR33A LTR ERVL 0 523 38 797 199 17 6 chr17 6653532 6653708 -78784772 + L1MC4 LINE L1 7438 7615 -427 556 138 0 47 chr17 6653717 6653963 -78784517 + AluJ SINE Alu 11 294 -18 1067 256 73 42 chr17 6653964 6654348 -78784132 + L1MC4 LINE L1 7620 8019 -23 2078 127 0 3 chr17 6654348 6654640 -78783840 - AluSg SINE Alu -17 293 3 1067 256 73 42 chr17 6654640 6654665 -78783815 + L1MC4 LINE L1 8019 8042 0 629 270 90 69 chr17 6654880 6655115 -78783365 + MLT1H LTR MaLR 1 230 -365 5533 45 1 1 chr17 6655115 6655781 -78782699 + L1PA7 LINE L1 5483 6148 -6 629 270 90 69 chr17 6655781 6656004 -78782476 + MLT1H LTR MaLR 230 447 -148 2478 42 19 13 chr17 6656004 6656313 -78782167 - AluY SINE Alu 0 311 1 629 270 90 69 chr17 6656313 6656356 -78782124 + MLT1H LTR MaLR 447 488 -107 2308 138 14 6 chr17 6656356 6656719 -78781761 + MER47A DNA MER2_type 1 366 0 629 270 90 69 chr17 6656719 6656736 -78781744 + MLT1H LTR MaLR 488 588 -7 9952 195 90 16 chr17 6656864 6657471 -78781009 - L1M3c LINE L1 -835 6730 6169 2411 196 16 43 chr17 6657471 6657728 -78780752 - MER70A LTR ERVL 0 472 233 1897 122 79 0 chr17 6657728 6658007 -78780473 - AluSg SINE Alu -9 301 1 2411 196 16 43 chr17 6658007 6658234 -78780246 - MER70A LTR ERVL -239 233 1 9952 195 90 16 chr17 6658234 6659702 -78778778 - L1M3c LINE L1 -1396 6169 4810 189 0 0 0 chr17 6659702 6659723 -78778757 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 9952 195 90 16 chr17 6659723 6660376 -78778104 - L1M3c LINE L1 -2755 4810 4206 2371 90 0 0 chr17 6660376 6660675 -78777805 + AluSg1 SINE Alu 1 299 -10 9952 195 90 16 chr17 6660675 6661065 -78777415 - L1M3c LINE L1 -3359 4206 3207 1454 202 37 118 chr17 6661066 6661663 -78776817 - L1 LINE L1 -4171 3395 2719 270 0 0 0 chr17 6661665 6661695 -78776785 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 7353 11 2 0 chr17 6661695 6662511 -78775969 - L1PA3 LINE L1 -10 6145 5328 498 213 25 0 chr17 6662484 6662606 -78775874 - L1M3c LINE L1 -4555 2941 2817 * 537 306 117 20 chr17 6662711 6662959 -78775521 - L1M3c LINE L1 -5546 1950 1679 1540 250 32 5 chr17 6663033 6663409 -78775071 - L1M3c LINE L1 -5755 1741 1356 269 297 50 30 chr17 6663883 6663984 -78774496 - L2 LINE L2 -4 3309 3207 507 212 63 112 chr17 6664007 6664248 -78774232 - L1MC5 LINE L1 -126 7916 7665 1942 115 7 7 chr17 6664248 6664527 -78773953 + AluSx SINE Alu 1 279 -33 279 54 0 0 chr17 6664527 6664564 -78773916 + (CAAT)n Simple_repeat Simple_repeat 3 39 0 507 212 63 112 chr17 6664564 6664660 -78773820 - L1MC5 LINE L1 -375 7667 7505 669 249 39 11 chr17 6664783 6664964 -78773516 - L1ME2 LINE L1 -158 6006 5821 1452 104 0 0 chr17 6664981 6665163 -78773317 + AluSg SINE Alu 1 182 -128 2200 97 3 23 chr17 6665171 6665480 -78773000 + AluSx SINE Alu 1 303 -9 284 83 21 0 chr17 6665480 6665528 -78772952 + L1PA16 LINE L1 6118 6166 0 2098 120 0 10 chr17 6665543 6665869 -78772611 + AluSx SINE Alu 5 312 0 300 345 117 19 chr17 6666449 6666655 -78771825 + L1ME LINE L1 598 823 -5573 387 210 313 25 chr17 6666684 6667059 -78771421 + L1ME LINE L1 776 1205 -5201 4091 243 52 37 chr17 6667080 6669407 -78769073 + L1PBa LINE L1 3 1644 -5219 1576 160 3 30 chr17 6669404 6669691 -78768789 + L1PB3 LINE L1 5889 6161 -5 * 1383 262 52 15 chr17 6669696 6670158 -78768322 + L1ME LINE L1 1217 1695 -4711 6110 78 29 19 chr17 6670158 6671062 -78767418 + L1PB1 LINE L1 5237 6148 -3 1403 194 9 34 chr17 6671072 6671422 -78767058 + L1ME LINE L1 1691 2031 -4375 180 0 0 0 chr17 6671659 6671679 -78766801 + (CA)n Simple_repeat Simple_repeat 2 21 0 439 231 46 0 chr17 6672154 6672262 -78766218 - L2 LINE L2 -2 3311 3199 261 258 114 135 chr17 6672850 6673183 -78765297 + L2 LINE L2 2943 3268 -4 1649 175 0 31 chr17 6673650 6673941 -78764539 + AluJo SINE Alu 1 282 -30 226 268 18 116 chr17 6673962 6674074 -78764406 - L2 LINE L2 -14 3258 3158 270 0 0 0 chr17 6674192 6674222 -78764258 + (TG)n Simple_repeat Simple_repeat 1 30 0 742 149 9 0 chr17 6674223 6674337 -78764143 - FLAM_C SINE Alu -28 115 1 2272 104 7 10 chr17 6675180 6675315 -78763165 + AluSx SINE Alu 1 135 -177 2377 95 0 7 chr17 6675315 6675621 -78762859 + AluSg SINE Alu 1 304 -6 2272 104 7 10 chr17 6675621 6675794 -78762686 + AluSx SINE Alu 135 308 -4 2344 76 0 3 chr17 6676450 6676741 -78761739 - AluY SINE Alu -21 290 1 338 67 0 0 chr17 6676822 6676867 -78761613 - MADE1 DNA Mariner -35 45 1 2767 215 77 58 chr17 6677610 6678291 -78760189 - HAL1 LINE L1 -604 1903 1196 2615 55 0 7 chr17 6678291 6678600 -78759880 - AluY SINE Alu -4 307 1 2767 215 77 58 chr17 6678600 6678914 -78759566 - HAL1 LINE L1 -1311 1196 889 2610 146 34 0 chr17 6679033 6679451 -78759029 + MSTB1 LTR MaLR 1 432 0 349 287 0 10 chr17 6679452 6679553 -78758927 + MIR SINE MIR 101 200 -62 1123 259 90 25 chr17 6679690 6680077 -78758403 + MLT1K LTR MaLR 108 588 0 871 295 16 28 chr17 6680173 6680536 -78757944 - L1ME LINE L1 -343 5778 5420 191 277 48 48 chr17 6680696 6680779 -78757701 + MIR SINE MIR 25 107 -101 387 248 48 0 chr17 6680960 6681085 -78757395 + L1ME1 LINE L1 6035 6165 -1 1460 76 0 0 chr17 6681091 6681263 -78757217 + AluY SINE Alu 1 172 -139 1757 196 124 28 chr17 6681366 6681628 -78756852 - L1MDa LINE L1 -4791 1749 1514 195 42 0 0 chr17 6681628 6681652 -78756828 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1757 196 124 28 chr17 6681652 6681890 -78756590 - L1MDa LINE L1 -5026 1514 1201 2174 136 0 7 chr17 6681891 6682200 -78756280 - AluSx SINE Alu -5 307 1 1910 240 27 27 chr17 6682219 6682665 -78755815 - L1MDa LINE L1 -6061 479 34 2448 169 62 102 chr17 6682666 6683489 -78754991 - L1ME1 LINE L1 -341 5825 5065 2073 88 0 4 chr17 6683489 6683750 -78754730 + AluSg SINE Alu 37 296 -14 2448 169 62 102 chr17 6683750 6684107 -78754373 - L1ME1 LINE L1 -1101 5065 4695 606 217 35 0 chr17 6684208 6684323 -78754157 - MER44D DNA MER2_type -220 389 1 412 225 75 116 chr17 6684331 6684470 -78754010 - HAL1 LINE L1 -2223 284 162 2418 89 3 3 chr17 6684470 6684783 -78753697 - AluSp SINE Alu 0 313 1 412 225 75 116 chr17 6684783 6684936 -78753544 - HAL1 LINE L1 -2345 162 4 348 276 95 65 chr17 6684910 6685178 -78753302 - L1MEd LINE L1 -4901 1235 945 * 2503 64 3 0 chr17 6685178 6685474 -78753006 - AluY SINE Alu -14 297 1 348 276 95 65 chr17 6685474 6685680 -78752800 - L1MEd LINE L1 -5191 945 747 26 30 0 0 chr17 6685826 6685859 -78752621 + AT_rich Low_complexity Low_complexity 1 33 0 461 104 0 0 chr17 6685860 6685927 -78752553 - L1PA10 LINE L1 -13 6155 6089 4460 91 15 7 chr17 6685927 6686540 -78751940 + L1PA10 LINE L1 5459 6076 -92 2387 73 7 3 chr17 6686541 6686844 -78751636 - AluY SINE Alu -7 304 1 962 197 126 74 chr17 6687077 6687426 -78751054 - MER66A LTR ERV1 -40 438 66 2251 113 7 0 chr17 6687426 6687736 -78750744 - AluSx SINE Alu 0 312 1 962 197 126 74 chr17 6687736 6687776 -78750704 - MER66A LTR ERV1 -412 66 29 25 0 0 0 chr17 6687854 6687879 -78750601 + AT_rich Low_complexity Low_complexity 1 25 0 2044 148 3 3 chr17 6687972 6688282 -78750198 - AluJo SINE Alu -2 310 1 251 179 0 36 chr17 6688542 6688598 -78749882 - MIR SINE MIR -21 241 188 1144 223 47 69 chr17 6688820 6689215 -78749265 + MLT1K LTR MaLR 165 586 -29 2146 120 3 13 chr17 6689245 6689554 -78748926 - AluSq SINE Alu -2 311 6 258 246 29 0 chr17 6689561 6689630 -78748850 + MLT1K LTR MaLR 514 584 -4 2429 77 3 22 chr17 6689814 6690125 -78748355 - AluSp SINE Alu -8 305 1 284 0 28 0 chr17 6690379 6690415 -78748065 + (TTA)n Simple_repeat Simple_repeat 3 39 0 2346 152 44 12 chr17 6690467 6690875 -78747605 - MSTB LTR MaLR -4 422 2 2386 89 0 0 chr17 6691035 6691326 -78747154 - AluSx SINE Alu -21 291 1 434 110 0 0 chr17 6691648 6691721 -78746759 - L1MC3 LINE L1 -1 7784 7712 2001 82 74 0 chr17 6692407 6692677 -78745803 - AluSx SINE Alu -22 290 1 787 276 133 44 chr17 6692679 6693121 -78745359 - HAL1 LINE L1 -1656 851 357 2251 110 0 3 chr17 6693121 6693429 -78745051 - AluSq SINE Alu -6 307 1 787 276 133 44 chr17 6693429 6693489 -78744991 - HAL1 LINE L1 -2150 357 304 328 165 44 77 chr17 6693501 6693592 -78744888 - Tigger7 DNA MER2_type 0 2587 2500 471 171 0 0 chr17 6693729 6693799 -78744681 - AluJ/FLAM SINE Alu -240 72 3 216 0 0 0 chr17 6693812 6693836 -78744644 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 1840 98 0 0 chr17 6693836 6694072 -78744408 - AluSx SINE Alu -32 280 45 5356 103 31 16 chr17 6694076 6694472 -78744008 - Tigger1 DNA MER2_type -948 1470 1081 2274 114 0 0 chr17 6694472 6694771 -78743709 - AluSg SINE Alu -10 300 2 5356 103 31 16 chr17 6694771 6695187 -78743293 - Tigger1 DNA MER2_type -1337 1081 646 1349 108 15 0 chr17 6695187 6695382 -78743098 - AluSc SINE Alu -13 296 99 530 161 0 76 chr17 6695493 6695611 -78742869 + AluJo SINE Alu 112 220 -92 195 167 136 0 chr17 6695653 6695719 -78742761 + MIR SINE MIR 127 201 -61 267 31 0 0 chr17 6695743 6695775 -78742705 + (CA)n Simple_repeat Simple_repeat 1 32 0 591 212 8 0 chr17 6696212 6696353 -78742127 + FLAM_A SINE Alu 1 142 0 905 169 17 11 chr17 6696398 6696576 -78741904 - MER96B DNA MER1_type? -237 180 2 2313 110 0 7 chr17 6697053 6697362 -78741118 + AluSx SINE Alu 1 307 -5 265 359 57 31 chr17 6697426 6697744 -78740736 + L2 LINE L2 1217 1542 -1772 623 165 65 88 chr17 6697744 6697793 -78740687 - MER106A DNA MER1_type -3 233 184 2362 95 3 7 chr17 6697793 6698099 -78740381 - AluSp SINE Alu -8 305 1 623 165 65 88 chr17 6698099 6698219 -78740261 - MER106A DNA MER1_type -52 184 68 659 149 0 0 chr17 6698249 6698343 -78740137 + 5S rRNA rRNA 1 94 -27 1141 150 86 0 chr17 6698730 6698960 -78739520 - L1MA9 LINE L1 0 6312 6064 1186 206 26 90 chr17 6698951 6699020 -78739460 + MSTB2 LTR MaLR 7 79 -378 1984 142 7 3 chr17 6699020 6699322 -78739158 + AluJb SINE Alu 9 311 -1 1186 206 26 90 chr17 6699322 6699597 -78738883 + MSTB2 LTR MaLR 79 329 -128 2186 88 3 3 chr17 6699698 6699994 -78738486 - AluSq SINE Alu -17 296 1 1549 150 52 21 chr17 6700281 6700294 -78738186 - AluJb SINE Alu -7 295 284 459 63 0 0 chr17 6700294 6700357 -78738123 + (TATG)n Simple_repeat Simple_repeat 2 64 0 1549 150 52 21 chr17 6700357 6700629 -78737851 - AluJb SINE Alu -18 284 1 267 345 54 20 chr17 6700951 6701176 -78737304 + L2 LINE L2 2745 2969 -303 957 189 4 88 chr17 6701587 6701652 -78736828 + MIR SINE MIR 6 75 -187 4161 186 36 45 chr17 6701652 6702614 -78735866 - LTR13 LTR ERVK 0 954 1 957 189 4 88 chr17 6702614 6702786 -78735694 + MIR SINE MIR 75 223 -39 1852 151 0 19 chr17 6702823 6703135 -78735345 - AluSx SINE Alu -6 306 1 900 125 21 0 chr17 6703431 6703575 -78734905 + AluSp/q SINE Alu 163 309 -4 1061 92 12 0 chr17 6703575 6703738 -78734742 + Tigger1 DNA MER2_type 1584 1748 -670 1777 101 0 0 chr17 6703738 6703975 -78734505 + AluSq SINE Alu 1 237 -76 1945 126 0 26 chr17 6704246 6704555 -78733925 + AluJb SINE Alu 1 301 -11 2171 104 0 7 chr17 6704592 6704890 -78733590 + AluSx SINE Alu 1 296 -16 240 237 13 40 chr17 6704892 6704968 -78733512 + MER67C LTR ERV1 28 101 -609 2050 140 25 6 chr17 6705068 6705082 -78733398 + MER67C LTR ERV1 347 359 -351 2268 104 0 0 chr17 6705082 6705379 -78733101 + AluSx SINE Alu 1 297 -15 2050 140 25 6 chr17 6705379 6705721 -78732759 + MER67C LTR ERV1 359 710 0 200 282 84 0 chr17 6705883 6705954 -78732526 - MIR SINE MIR -1 261 185 207 0 0 0 chr17 6706344 6706367 -78732113 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2360 69 0 10 chr17 6709133 6709437 -78729043 - AluY SINE Alu -10 301 1 203 208 19 38 chr17 6710192 6710245 -78728235 + C-rich Low_complexity Low_complexity 2 53 0 207 310 129 9 chr17 6711664 6711780 -78726700 + MIR3 SINE MIR 36 165 -43 984 216 16 0 chr17 6712277 6712462 -78726018 - MER5A DNA MER1_type 0 189 2 1911 152 0 13 chr17 6712526 6712828 -78725652 - AluSx SINE Alu -14 298 1 838 174 0 0 chr17 6714084 6714216 -78724264 + FLAM_C SINE Alu 2 133 0 1714 182 0 3 chr17 6715010 6715306 -78723174 - AluJo SINE Alu -17 295 1 395 314 95 71 chr17 6715613 6716107 -78722373 - L1M4 LINE L1 -2640 3506 3001 404 342 67 53 chr17 6715656 6716092 -78722388 + HAL1b LINE L1 903 1344 -4 23 0 0 0 chr17 6716119 6716142 -78722338 + AT_rich Low_complexity Low_complexity 1 23 0 360 311 56 25 chr17 6716504 6716665 -78721815 - MIR SINE MIR -69 193 28 2179 73 0 0 chr17 6717051 6717326 -78721154 - AluSg SINE Alu -4 306 32 21 0 0 0 chr17 6717633 6717654 -78720826 + GC_rich Low_complexity Low_complexity 1 21 0 1332 207 74 45 chr17 6719150 6719183 -78719297 - MLT1A1 LTR MaLR -2 363 332 2368 73 3 0 chr17 6719183 6719483 -78718997 + AluSg SINE Alu 1 301 -9 1332 207 74 45 chr17 6719483 6719802 -78718678 - MLT1A1 LTR MaLR -33 332 1 316 339 54 0 chr17 6719920 6720032 -78718448 + MIR SINE MIR 30 147 -61 1913 109 8 0 chr17 6720073 6720338 -78718142 + AluSx SINE Alu 29 295 -17 240 279 149 11 chr17 6720357 6720626 -78717854 - HAL1 LINE L1 -1306 1201 896 1001 124 103 5 chr17 6720635 6720829 -78717651 - AluSg/x SINE Alu -15 295 83 453 89 0 0 chr17 6720948 6721004 -78717476 - AluJ/FLAM SINE Alu -247 65 10 2354 64 0 0 chr17 6721024 6721320 -78717160 - AluY SINE Alu -15 296 1 329 274 234 11 chr17 6721402 6721577 -78716903 - MIR SINE MIR 0 262 49 947 220 117 47 chr17 6722534 6722834 -78715646 - MER58B DNA MER1_type -2 339 19 1712 126 15 4 chr17 6723414 6723683 -78714797 - AluSx SINE Alu 0 312 41 1811 54 0 0 chr17 6724882 6725105 -78713375 + AluSg/x SINE Alu 75 297 -13 618 246 110 18 chr17 6725845 6726073 -78712407 + MIR SINE MIR 14 262 0 26 101 0 0 chr17 6726916 6727005 -78711475 + GC_rich Low_complexity Low_complexity 1 89 0 297 0 0 0 chr17 6736664 6736697 -78701783 + (CAG)n Simple_repeat Simple_repeat 1 33 0 767 212 53 6 chr17 6737250 6737420 -78701060 + MER5B DNA MER1_type 1 178 0 1165 173 0 20 chr17 6737518 6737720 -78700760 + AluJo SINE Alu 1 198 -114 233 289 56 22 chr17 6741865 6741955 -78696525 + MIR3 SINE MIR 106 198 -10 1762 183 112 23 chr17 6741955 6742250 -78696230 - MSTC LTR MaLR 0 428 88 2268 78 7 7 chr17 6742250 6742546 -78695934 - AluY SINE Alu -15 296 1 1762 183 112 23 chr17 6742546 6742643 -78695837 - MSTC LTR MaLR -340 88 1 5287 205 92 106 chr17 6742643 6742933 -78695547 - MSTC-int LTR MaLR 0 1735 1442 2236 82 7 0 chr17 6742933 6743227 -78695253 - AluSg SINE Alu -14 296 1 5287 205 92 106 chr17 6743227 6743828 -78694652 - MSTC-int LTR MaLR -293 1442 834 333 0 0 0 chr17 6743828 6743865 -78694615 + (CA)n Simple_repeat Simple_repeat 2 38 0 5287 205 92 106 chr17 6743865 6744504 -78693976 - MSTC-int LTR MaLR -901 834 230 2310 79 3 0 chr17 6744504 6744808 -78693672 - AluSg SINE Alu -5 305 1 5287 205 92 106 chr17 6744808 6745034 -78693446 - MSTC-int LTR MaLR -1505 230 2 933 135 88 31 chr17 6745044 6745237 -78693243 - MSTC LTR MaLR -4 424 221 281 140 0 53 chr17 6745383 6745440 -78693040 - MSTC LTR MaLR -250 178 125 647 165 108 19 chr17 6745440 6745598 -78692882 - MSTC LTR MaLR -256 172 1 2205 109 0 6 chr17 6745673 6745986 -78692494 + AluSq SINE Alu 1 311 -2 454 281 88 72 chr17 6746065 6746256 -78692224 - MIR SINE MIR -6 256 58 2115 95 0 0 chr17 6746256 6746570 -78691910 + AluSx SINE Alu 1 314 0 454 281 88 72 chr17 6746570 6746626 -78691854 - MIR SINE MIR -204 58 4 2457 43 27 0 chr17 6748821 6749122 -78689358 + AluSg SINE Alu 1 309 -1 2647 53 0 0 chr17 6749205 6749507 -78688973 + AluY SINE Alu 1 302 -9 273 230 206 40 chr17 6749524 6749650 -78688830 - MIR SINE MIR -93 169 23 * 440 319 80 5 chr17 6749638 6749826 -78688654 - MIR SINE MIR -38 224 23 328 294 39 10 chr17 6750690 6750792 -78687688 - MER91C DNA MER1_type -35 105 1 1394 39 0 0 chr17 6751084 6751239 -78687241 + AluY SINE Alu 147 301 -10 2190 80 0 104 chr17 6751921 6752259 -78686221 - AluSg SINE Alu -7 303 1 2453 92 0 0 chr17 6752666 6752972 -78685508 + AluSg SINE Alu 1 306 -4 2096 92 14 11 chr17 6756123 6756449 -78682031 + AluSx SINE Alu 1 327 0 699 243 26 30 chr17 6756589 6756856 -78681624 - LTR13 LTR ERVK -741 266 1 784 157 6 81 chr17 6756856 6757028 -78681452 + MIR SINE MIR 65 223 -39 2156 137 0 10 chr17 6757064 6757377 -78681103 - AluSx SINE Alu -2 310 1 2480 81 3 0 chr17 6757684 6757991 -78680489 + AluSp SINE Alu 1 308 -5 735 294 43 62 chr17 6758024 6758524 -78679956 - L2 LINE L2 0 3272 2778 2482 70 0 0 chr17 6758711 6759051 -78679429 - AluY SINE Alu 0 311 1 2383 86 3 0 chr17 6759617 6759908 -78678572 - AluSp SINE Alu -21 292 1 1412 122 0 0 chr17 6760416 6760605 -78677875 - AluSg/x SINE Alu -1 311 123 2382 84 0 0 chr17 6760846 6761157 -78677323 - AluSx SINE Alu 0 311 1 425 314 0 0 chr17 6761216 6761337 -78677143 - LTR67 LTR ERVL -8 549 429 239 266 0 16 chr17 6761505 6761569 -78676911 - LTR67 LTR ERVL -386 171 109 256 215 94 111 chr17 6761681 6761832 -78676648 - L1M4 LINE L1 -2976 3170 3024 1591 110 0 5 chr17 6761832 6762069 -78676411 + AluSq SINE Alu 78 313 0 256 215 94 111 chr17 6762069 6762214 -78676266 - L1M4 LINE L1 -3122 3024 2878 2318 95 0 3 chr17 6762621 6762915 -78675565 + AluSx SINE Alu 2 294 -18 224 280 53 27 chr17 6762983 6763058 -78675422 - MIR SINE MIR -137 125 49 494 122 52 17 chr17 6764346 6764518 -78673962 + (CA)n Simple_repeat Simple_repeat 2 179 0 1711 192 16 39 chr17 6765122 6765503 -78672977 - MLT1A2 LTR MaLR 0 374 3 2464 153 32 114 chr17 6765840 6766063 -78672417 - LTR9 LTR ERV1 -11 601 361 2316 75 4 0 chr17 6766063 6766372 -78672108 - AluSq SINE Alu 0 314 5 2464 153 32 114 chr17 6766372 6766802 -78671678 - LTR9 LTR ERV1 -251 361 1 864 88 0 0 chr17 6766952 6767065 -78671415 + AluSg/x SINE Alu 192 304 -5 3070 167 22 90 chr17 6767702 6768321 -78670159 + LTR8 LTR ERV1 1 661 -30 1204 170 83 104 chr17 6768321 6768781 -78669699 - LTR7 LTR ERV1 0 450 1 2240 100 0 7 chr17 6768781 6769072 -78669408 + AluSc SINE Alu 1 289 -20 3070 167 22 90 chr17 6769072 6769193 -78669287 + LTR8 LTR ERV1 659 691 0 1020 130 13 7 chr17 6769353 6769507 -78668973 + AluJo SINE Alu 12 166 -146 290 150 12 113 chr17 6769515 6769595 -78668885 - MER66A LTR ERV1 -12 466 395 2356 89 0 3 chr17 6769600 6769892 -78668588 + AluSx SINE Alu 15 305 -7 2565 62 0 7 chr17 6769892 6770201 -78668279 + AluSg SINE Alu 1 307 -3 2243 164 2 84 chr17 6770201 6770676 -78667804 - MER41B LTR ERV1 -68 567 132 868 132 0 23 chr17 6770697 6770855 -78667625 + AluJo SINE Alu 157 311 0 829 90 42 102 chr17 6771330 6771353 -78667127 + MER4A LTR ERV1 1 24 -640 1931 112 12 68 chr17 6771353 6771676 -78666804 + AluSx SINE Alu 1 305 -7 829 90 42 102 chr17 6771676 6771819 -78666661 + MER4A LTR ERV1 24 157 -507 * 1789 80 124 0 chr17 6771817 6772092 -78666388 + MER4A LTR ERV1 342 650 -14 2470 78 3 7 chr17 6772562 6772871 -78665609 - AluSx SINE Alu -4 308 1 2246 95 0 3 chr17 6773155 6773440 -78665040 - AluSg SINE Alu -24 286 3 2544 44 0 13 chr17 6774283 6774581 -78663899 + AluY SINE Alu 1 294 -17 1020 251 128 34 chr17 6774714 6775152 -78663328 + ERVL LTR ERVL 4320 4798 -966 1929 95 88 0 chr17 6775167 6775440 -78663040 - AluSg SINE Alu -13 297 1 827 280 37 8 chr17 6775474 6775717 -78662763 + ERVL LTR ERVL 4879 5128 -636 329 166 18 11 chr17 6775815 6775903 -78662577 - Alu SINE Alu -250 52 1 2440 98 3 9 chr17 6775934 6776249 -78662231 - AluSp SINE Alu 0 313 1 1596 179 34 0 chr17 6776324 6776586 -78661894 - AluJb SINE Alu -41 271 1 422 282 118 0 chr17 6776589 6776759 -78661721 - HAL1b LINE L1 -613 735 546 3588 145 7 16 chr17 6776764 6777015 -78661465 + L1MC2 LINE L1 5189 5441 -903 1402 184 63 19 chr17 6777015 6777323 -78661157 + AluJb SINE Alu 1 320 0 3588 145 7 16 chr17 6777323 6777777 -78660703 + L1MC2 LINE L1 5441 5891 -453 1312 118 0 0 chr17 6777778 6777956 -78660524 + AluSp SINE Alu 136 313 0 588 155 23 39 chr17 6777960 6778089 -78660391 + L1MC2 LINE L1 5880 6006 -338 408 305 53 64 chr17 6778110 6778387 -78660093 - HAL1b LINE L1 -840 508 235 700 176 0 37 chr17 6778387 6778523 -78659957 - FLAM_C SINE Alu -2 131 1 408 305 53 64 chr17 6778523 6778622 -78659858 - HAL1b LINE L1 -1113 235 136 2270 98 16 3 chr17 6778789 6779096 -78659384 - AluSp SINE Alu -2 311 1 2956 105 85 0 chr17 6779096 6779554 -78658926 - THE1B-int LTR MaLR -1083 497 1 2610 89 11 3 chr17 6779554 6779915 -78658565 - THE1B LTR MaLR 0 364 1 622 101 0 0 chr17 6779916 6780005 -78658475 + AluSg/x SINE Alu 215 303 -9 2291 112 0 0 chr17 6780617 6780920 -78657560 + AluSg SINE Alu 1 303 -7 2405 87 7 0 chr17 6780986 6781285 -78657195 + AluY SINE Alu 1 301 -10 395 106 15 0 chr17 6781648 6781714 -78656766 + (GA)n Simple_repeat Simple_repeat 2 68 0 2581 63 0 0 chr17 6782254 6782554 -78655926 + AluSc SINE Alu 1 300 -9 2828 115 0 58 chr17 6782782 6783172 -78655308 - L1PB3 LINE L1 -3 6151 5795 2329 117 3 0 chr17 6783172 6783479 -78655001 - AluSx SINE Alu 0 312 5 2828 115 0 58 chr17 6783479 6783592 -78654888 - L1PB3 LINE L1 -359 5795 5677 2505 83 3 3 chr17 6783592 6783905 -78654575 - AluSp SINE Alu 0 313 1 415 283 81 63 chr17 6784004 6784094 -78654386 - L1M4 LINE L1 -1310 4836 4749 4028 193 34 51 chr17 6784094 6785080 -78653400 + LTR5 LTR ERVK 1 969 0 415 283 81 63 chr17 6785080 6785344 -78653136 - L1M4 LINE L1 -1397 4749 4470 2508 43 26 10 chr17 6785344 6785648 -78652832 - AluY SINE Alu -2 309 1 415 283 81 63 chr17 6785648 6785734 -78652746 - L1M4 LINE L1 -1676 4470 4387 258 284 21 42 chr17 6785908 6786003 -78652477 + LTR16C LTR ERVL 96 188 -303 586 231 22 22 chr17 6786075 6786257 -78652223 + LTR16C LTR ERVL 310 491 0 2406 82 0 7 chr17 6786625 6786929 -78651551 + AluSx SINE Alu 1 302 -10 265 204 28 36 chr17 6787148 6787272 -78651208 - L1M LINE L1 -810 5336 5222 2177 119 24 3 chr17 6787288 6787583 -78650897 - AluJb SINE Alu -11 301 1 317 286 128 25 chr17 6787583 6787786 -78650694 - L1MC5 LINE L1 -470 7491 7268 2550 66 3 0 chr17 6787960 6788263 -78650217 - AluSg SINE Alu -6 304 1 294 314 85 8 chr17 6788321 6788439 -78650041 + MIR SINE MIR 130 256 -6 2180 112 3 3 chr17 6789506 6789800 -78648680 - AluSx SINE Alu -18 294 1 2464 67 0 3 chr17 6790435 6790735 -78647745 + AluY SINE Alu 1 299 -12 24 32 0 0 chr17 6790737 6790768 -78647712 + AT_rich Low_complexity Low_complexity 1 31 0 697 263 19 0 chr17 6790809 6790969 -78647511 + MIR SINE MIR 2 164 -98 1307 158 72 66 chr17 6790992 6791053 -78647427 + MLT1A1 LTR MaLR 1 60 -305 2534 73 0 7 chr17 6791053 6791355 -78647125 + AluSp SINE Alu 1 300 -13 1307 158 72 66 chr17 6791355 6791597 -78646883 + MLT1A1 LTR MaLR 60 306 -59 549 210 73 0 chr17 6791599 6791723 -78646757 - FLAM_C SINE Alu -10 133 1 341 191 15 0 chr17 6791724 6791792 -78646688 + MLT1A1 LTR MaLR 297 365 0 242 217 9 113 chr17 6791810 6791870 -78646610 + MIR SINE MIR 147 193 -69 2766 13 0 3 chr17 6791870 6792168 -78646312 - AluY SINE Alu -14 297 1 242 217 9 113 chr17 6792168 6792213 -78646267 + MIR SINE MIR 193 241 -21 2109 125 0 19 chr17 6792226 6792538 -78645942 - AluSg SINE Alu -4 306 1 709 179 0 15 chr17 6792538 6792672 -78645808 - AluJo SINE Alu -178 134 3 694 165 39 18 chr17 6792672 6792835 -78645645 - MLT1A1 LTR MaLR -207 167 1 * 868 316 88 10 chr17 6792835 6793242 -78645238 - MLT1L LTR MaLR -80 535 97 2285 92 10 3 chr17 6793356 6793659 -78644821 - AluSq SINE Alu -8 305 1 2024 78 4 0 chr17 6794589 6794834 -78643646 + AluY SINE Alu 1 246 -65 849 98 0 0 chr17 6794934 6795046 -78643434 - AluSg SINE Alu -198 112 1 4085 150 25 27 chr17 6795234 6796019 -78642461 + LTR1 LTR ERV1 1 784 -1 2169 85 6 63 chr17 6796073 6796404 -78642076 + AluSx SINE Alu 1 312 0 209 281 11 67 chr17 6796983 6797072 -78641408 + L2 LINE L2 2279 2362 -952 2466 96 3 0 chr17 6797103 6797415 -78641065 - AluSq SINE Alu 0 313 1 2250 80 0 40 chr17 6797603 6797905 -78640575 - AluSq SINE Alu -19 294 5 424 310 82 35 chr17 6797922 6798241 -78640239 + L2 LINE L2 2543 2876 -438 2550 91 0 0 chr17 6798967 6799276 -78639204 - AluSc SINE Alu 0 309 1 225 0 0 0 chr17 6799363 6799388 -78639092 + (A)n Simple_repeat Simple_repeat 1 25 0 598 293 35 20 chr17 6799388 6799586 -78638894 - MIR SINE MIR -38 224 24 422 273 115 34 chr17 6799753 6799962 -78638518 - L2 LINE L2 -5 3308 3083 2292 103 0 3 chr17 6800343 6800643 -78637837 - AluSx SINE Alu -13 299 1 5403 40 0 2 chr17 6801529 6802172 -78636308 - L1PA4 LINE L1 -3 6152 5511 8341 52 4 8 chr17 6802319 6803330 -78635150 - LTR13 LTR ERVK 0 1007 1 2319 93 7 0 chr17 6803565 6803856 -78634624 - AluSx SINE Alu -8 304 12 2090 48 0 24 chr17 6804008 6804258 -78634222 - AluY SINE Alu -17 294 51 553 41 0 41 chr17 6804258 6804331 -78634149 - AluY SINE Alu -164 147 78 655 165 10 0 chr17 6804543 6804646 -78633834 - AluJb SINE Alu -13 299 196 2099 108 11 7 chr17 6804650 6804937 -78633543 - AluSx SINE Alu -24 288 1 1720 176 78 22 chr17 6805457 6805983 -78632497 - MLT2A2 LTR ERVL 0 554 1 2208 111 3 0 chr17 6806477 6806775 -78631705 + AluSx SINE Alu 1 299 -13 282 263 5 88 chr17 6806930 6807135 -78631345 - HAL1 LINE L1 -310 2197 2010 256 216 189 0 chr17 6807340 6807414 -78631066 + LOR1a LTR ERV1 3 90 -407 2275 104 0 0 chr17 6807432 6807731 -78630749 - AluY SINE Alu -12 299 1 2376 94 3 0 chr17 6807863 6808161 -78630319 - AluSp SINE Alu -12 301 3 972 288 54 25 chr17 6808389 6808833 -78629647 - HAL1 LINE L1 -833 1674 1218 2494 83 0 3 chr17 6809254 6809566 -78628914 + AluSq SINE Alu 1 311 -2 527 295 90 18 chr17 6809810 6810173 -78628307 + L1M2 LINE L1 5262 5648 -643 588 111 0 0 chr17 6810175 6810265 -78628215 + (TTCC)n Simple_repeat Simple_repeat 3 92 0 1054 149 12 6 chr17 6810273 6810441 -78628039 - FRAM SINE Alu -7 169 1 258 216 122 0 chr17 6810529 6810603 -78627877 + L1ME2 LINE L1 5729 5811 -1997 319 341 38 8 chr17 6810627 6810759 -78627721 + L1ME2 LINE L1 5811 5946 -218 1123 244 53 67 chr17 6810815 6811290 -78627190 - MLT1H LTR MaLR 0 549 82 2275 77 59 3 chr17 6811557 6811844 -78626636 + AluSq SINE Alu 1 303 -10 226 231 0 19 chr17 6812210 6812262 -78626218 - MER112 DNA MER1_type -6 254 204 307 247 148 0 chr17 6812342 6812423 -78626057 - L2 LINE L2 0 3313 3221 2478 78 7 0 chr17 6812828 6813137 -78625343 - AluSq SINE Alu -2 311 1 403 281 22 22 chr17 6813214 6813353 -78625127 + MIR SINE MIR 88 226 -36 207 171 0 0 chr17 6813668 6813703 -78624777 + GA-rich Low_complexity Low_complexity 2 36 0 241 120 53 13 chr17 6814396 6814471 -78624009 + (CCCCAG)n Simple_repeat Simple_repeat 6 83 0 438 159 40 23 chr17 6814899 6815075 -78623405 + (TG)n Simple_repeat Simple_repeat 2 180 0 663 116 56 0 chr17 6815094 6815432 -78623048 + (TG)n Simple_repeat Simple_repeat 1 357 0 1059 169 0 17 chr17 6815584 6815761 -78622719 - AluJo SINE Alu -55 257 84 238 343 40 0 chr17 6816084 6816183 -78622297 + L2 LINE L2 3146 3248 -24 425 246 217 11 chr17 6816448 6816623 -78621857 - L1MEc LINE L1 -5083 1313 1103 364 335 29 4 chr17 6816919 6817164 -78621316 - HAL1 LINE L1 -902 1605 1355 581 167 0 0 chr17 6817188 6817284 -78621196 + MSTB LTR MaLR 327 422 -4 4062 189 66 44 chr17 6817287 6818200 -78620280 - L1 LINE L1 -3752 3813 2921 1831 185 7 7 chr17 6818200 6818503 -78619977 + AluJb SINE Alu 2 304 -8 4062 189 66 44 chr17 6818503 6818659 -78619821 - L1 LINE L1 -4644 2921 2770 1622 138 120 22 chr17 6818659 6818934 -78619546 - AluSg SINE Alu -8 302 1 4062 189 66 44 chr17 6818934 6819242 -78619238 - L1 LINE L1 -4795 2770 2405 6538 222 16 7 chr17 6819268 6820596 -78617884 + L1PA13 LINE L1 1 1340 -5447 1595 219 20 122 chr17 6820597 6821195 -78617285 + L1ME1 LINE L1 5510 6046 -120 408 158 40 0 chr17 6821207 6821283 -78617197 + MLT1D LTR MaLR 28 106 -399 2218 102 7 3 chr17 6821292 6821595 -78616885 + AluSx SINE Alu 1 304 -8 1436 211 31 0 chr17 6821687 6821976 -78616504 + MLT2B3 LTR ERVL 210 507 -47 243 203 0 0 chr17 6821977 6822041 -78616439 + (TATATG)n Simple_repeat Simple_repeat 3 66 0 255 118 0 0 chr17 6822046 6822093 -78616387 + MLT2B3 LTR ERVL 459 544 -10 481 284 109 40 chr17 6822274 6822590 -78615890 + L1MDa LINE L1 2365 2700 -3840 1947 88 0 16 chr17 6822627 6822877 -78615603 + AluSc SINE Alu 1 246 -63 481 123 32 52 chr17 6822978 6823133 -78615347 + C-rich Low_complexity Low_complexity 1 152 0 1528 151 14 76 chr17 6823146 6823437 -78615043 - AluJb SINE Alu -39 273 1 1466 205 57 40 chr17 6823437 6823494 -78614986 - L1MEc LINE L1 -5279 1117 1062 2548 71 0 0 chr17 6823494 6823804 -78614676 - AluY SINE Alu -1 310 1 1466 205 57 40 chr17 6823804 6824170 -78614310 - L1MEc LINE L1 -5334 1062 687 879 303 8 11 chr17 6824170 6824434 -78614046 - L1MEc LINE L1 -6054 342 80 625 287 28 17 chr17 6824491 6824672 -78613808 - MIR SINE MIR -50 212 30 194 104 0 62 chr17 6825308 6825356 -78613124 + (TG)n Simple_repeat Simple_repeat 1 45 0 183 189 0 0 chr17 6825466 6825519 -78612961 + (TG)n Simple_repeat Simple_repeat 2 54 0 345 179 26 26 chr17 6827360 6827477 -78611003 + (TG)n Simple_repeat Simple_repeat 1 117 0 416 131 51 23 chr17 6827536 6827711 -78610769 + (TG)n Simple_repeat Simple_repeat 1 180 0 187 91 61 45 chr17 6827701 6827767 -78610713 + (GTGTG)n Simple_repeat Simple_repeat 4 70 0 * 2310 88 0 3 chr17 6828275 6828572 -78609908 - AluY SINE Alu -15 296 1 325 215 0 0 chr17 6828716 6828781 -78609699 + MER116 DNA Mariner 16 80 0 391 320 59 40 chr17 6828790 6829012 -78609468 - L1M4 LINE L1 -3675 2471 2246 384 277 0 21 chr17 6829015 6829109 -78609371 - MER5B DNA MER1_type -1 177 86 407 42 0 0 chr17 6829110 6829158 -78609322 + AluY SINE Alu 2 49 -263 1464 171 0 13 chr17 6829258 6829497 -78608983 - AluSx SINE Alu -67 245 10 2358 95 0 3 chr17 6829910 6830205 -78608275 - AluSg SINE Alu -16 294 1 2248 118 3 0 chr17 6830226 6830530 -78607950 - AluSx SINE Alu -7 305 1 2377 99 3 0 chr17 6830530 6830831 -78607649 - AluSp SINE Alu -8 305 3 1317 19 0 0 chr17 6830964 6831118 -78607362 + L1PA4 LINE L1 6001 6154 -1 218 350 95 7 chr17 6832400 6832537 -78605943 + MIR SINE MIR 109 257 -5 2904 113 210 70 chr17 6833807 6834967 -78603513 + pTR5 LTR ERV1 743 2468 0 2258 106 0 0 chr17 6835249 6835541 -78602939 - AluSx SINE Alu -20 292 1 333 259 49 105 chr17 6835938 6836100 -78602380 + L1MC/D LINE L1 3808 3960 -2186 803 269 86 20 chr17 6836101 6836402 -78602078 - MLT1J LTR MaLR -148 363 43 2141 121 0 58 chr17 6836442 6836772 -78601708 - AluSx SINE Alu -1 311 1 1790 134 6 75 chr17 6836774 6837109 -78601371 - AluJb SINE Alu 0 312 1 832 215 49 0 chr17 6837109 6837272 -78601208 + MER58B DNA MER1_type 171 341 0 247 263 20 30 chr17 6837331 6837430 -78601050 + L1MC/D LINE L1 4101 4198 -1948 434 319 67 51 chr17 6837561 6837617 -78600863 + L1MC/D LINE L1 4557 4611 -1535 2151 124 3 0 chr17 6837617 6837908 -78600572 - AluSx SINE Alu -20 292 1 434 319 67 51 chr17 6837908 6838366 -78600114 + L1MC/D LINE L1 4611 5082 -1064 2273 112 3 0 chr17 6838366 6838671 -78599809 - AluSc SINE Alu -3 306 1 434 319 67 51 chr17 6838671 6838768 -78599712 + L1MC/D LINE L1 5082 5176 -970 608 211 181 20 chr17 6838768 6839189 -78599291 - LTR33 LTR ERVL 0 521 1 330 316 115 64 chr17 6839219 6839493 -78598987 + L1MC/D LINE L1 5306 5565 -2243 2384 88 0 0 chr17 6839493 6839787 -78598693 + AluSg SINE Alu 1 294 -16 330 316 115 64 chr17 6839787 6839798 -78598682 + L1MC/D LINE L1 5565 5574 -2234 2184 117 0 39 chr17 6839798 6840107 -78598373 + AluSq SINE Alu 1 297 -16 330 316 115 64 chr17 6840107 6840256 -78598224 + L1MC/D LINE L1 5574 5763 -2045 1306 133 20 5 chr17 6840298 6840494 -78597986 + AluSp SINE Alu 20 218 -95 227 287 0 52 chr17 6840833 6840969 -78597511 - L1MC/D LINE L1 -1923 5885 5757 1461 218 3 40 chr17 6841151 6841454 -78597026 + AluJo SINE Alu 1 292 -20 302 298 35 28 chr17 6841591 6841732 -78596748 - HAL1 LINE L1 -85 2422 2281 536 327 53 43 chr17 6841760 6842063 -78596417 - HAL1 LINE L1 -312 2195 1890 578 193 91 30 chr17 6842074 6842271 -78596209 - MER69 DNA AcHobo -10 2516 2308 320 214 0 0 chr17 6842281 6842337 -78596143 - L1MC4 LINE L1 -1339 6703 6648 1454 145 0 0 chr17 6842338 6842538 -78595942 - AluJo SINE Alu -13 299 100 447 134 0 0 chr17 6842589 6842656 -78595824 - AluJ/FLAM SINE Alu -224 88 22 327 248 138 18 chr17 6842664 6842773 -78595707 + MER50 LTR ERV1 10 131 -603 2114 93 0 4 chr17 6842774 6843044 -78595436 - AluSg1 SINE Alu -40 269 1 3334 170 7 38 chr17 6843045 6843621 -78594859 - L1MD2 LINE L1 -465 6288 5732 2196 89 7 0 chr17 6843621 6843924 -78594556 - AluSx SINE Alu 0 307 3 3334 170 7 38 chr17 6843924 6844073 -78594407 - L1MD2 LINE L1 -1021 5732 5580 2382 98 0 0 chr17 6844374 6844680 -78593800 - AluSx SINE Alu -6 306 1 286 301 44 0 chr17 6845459 6845596 -78592884 - LTR16A1 LTR ERVL -10 481 305 363 252 50 8 chr17 6845669 6845788 -78592692 - LTR16C LTR ERVL -164 327 204 2357 74 20 0 chr17 6845886 6846185 -78592295 + AluY SINE Alu 1 305 -6 3359 234 18 32 chr17 6846310 6846837 -78591643 - L1MD2 LINE L1 -2138 4402 3869 1583 133 20 119 chr17 6846837 6847182 -78591298 - AluJb SINE Alu -1 311 1 3359 234 18 32 chr17 6847182 6847211 -78591269 - L1MD2 LINE L1 -2671 3869 3841 2146 90 11 4 chr17 6847211 6847530 -78590950 - AluY SINE Alu 0 321 1 3359 234 18 32 chr17 6847530 6847706 -78590774 - L1MD2 LINE L1 -2699 3841 3664 4230 170 40 51 chr17 6847706 6848670 -78589810 + LTR13 LTR ERVK 1 954 0 3359 234 18 32 chr17 6848670 6848966 -78589514 - L1MD2 LINE L1 -2876 3664 3385 2000 124 60 0 chr17 6848966 6849248 -78589232 + AluSx SINE Alu 1 299 -13 1094 217 49 80 chr17 6849248 6849451 -78589029 - L1MD2 LINE L1 -5027 1516 1308 1835 163 0 40 chr17 6849451 6849776 -78588704 - AluJb SINE Alu 0 312 1 1094 217 49 80 chr17 6849776 6850014 -78588466 - L1MD2 LINE L1 -5235 1308 1064 205 40 0 0 chr17 6850014 6850039 -78588441 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 1720 112 123 8 chr17 6850039 6850290 -78588190 - AluSg1 SINE Alu -29 280 1 1094 217 49 80 chr17 6850290 6850347 -78588133 - L1MD2 LINE L1 -5477 1066 1001 1296 161 39 84 chr17 6850360 6850535 -78587945 - LTR5 LTR ERVK 0 969 788 304 28 0 0 chr17 6850535 6850571 -78587909 + (TTTTA)n Simple_repeat Simple_repeat 2 65 0 2263 54 18 4 chr17 6850571 6850849 -78587631 - AluY SINE Alu -1 317 1 4486 159 32 37 chr17 6850849 6851661 -78586819 - LTR5 LTR ERVK -161 808 1 1296 161 39 84 chr17 6850849 6850982 -78587498 - LTR5 LTR ERVK -179 790 674 325 288 8 8 chr17 6851665 6851783 -78586697 - L1MD2 LINE L1 -5511 1032 915 208 233 0 0 chr17 6852250 6852267 -78586213 + A-rich Low_complexity Low_complexity 4 20 -26 2378 94 7 0 chr17 6852267 6852574 -78585906 + AluSc SINE Alu 1 309 0 208 233 0 0 chr17 6852574 6852599 -78585881 + A-rich Low_complexity Low_complexity 19 46 0 307 394 49 39 chr17 6852664 6852948 -78585532 - L1MD2 LINE L1 -6234 306 20 1250 258 92 32 chr17 6852949 6853150 -78585330 + L1M4 LINE L1 2748 2935 -3211 2485 65 0 10 chr17 6853150 6853459 -78585021 + AluY SINE Alu 1 306 -5 1250 258 92 32 chr17 6853459 6853745 -78584735 + L1M4 LINE L1 2935 3202 -2944 1969 157 7 10 chr17 6853745 6853879 -78584601 + AluSx SINE Alu 1 134 -178 2387 57 47 0 chr17 6853879 6854175 -78584305 + AluY SINE Alu 1 310 -1 1969 157 7 10 chr17 6854175 6854340 -78584140 + AluSx SINE Alu 134 299 -13 1250 258 92 32 chr17 6854340 6854379 -78584101 + L1M4 LINE L1 3202 3237 -2909 2532 60 3 19 chr17 6854379 6854694 -78583786 + AluY SINE Alu 1 310 -1 1250 258 92 32 chr17 6854694 6854945 -78583535 + L1M4 LINE L1 3237 3574 -2572 284 155 357 0 chr17 6854939 6855068 -78583412 + L1M4 LINE L1 4878 5052 -1094 * 1210 176 14 5 chr17 6855068 6855278 -78583202 + AluJo SINE Alu 1 212 -100 250 306 72 0 chr17 6855285 6855396 -78583084 - L1M4 LINE L1 -1898 4248 4130 1175 246 81 48 chr17 6855887 6856427 -78582053 + L2 LINE L2 2473 3069 -244 2816 109 23 32 chr17 6856427 6856605 -78581875 + MSTA LTR MaLR 1 179 -249 2493 72 7 0 chr17 6856605 6856909 -78581571 - AluY SINE Alu -5 306 1 2816 109 23 32 chr17 6856909 6857162 -78581318 + MSTA LTR MaLR 179 428 0 1175 246 81 48 chr17 6857162 6857416 -78581064 + L2 LINE L2 3069 3313 0 3859 48 13 0 chr17 6857434 6857908 -78580572 + L1PA8 LINE L1 5691 6170 -2 248 294 22 0 chr17 6857946 6858038 -78580442 + L1MC4a LINE L1 4498 4591 -1555 261 333 152 0 chr17 6858246 6858411 -78580069 + LTR16A LTR ERVL 261 450 0 2186 103 33 0 chr17 6858463 6858765 -78579715 + AluSx SINE Alu 1 312 0 310 298 90 75 chr17 6858765 6858953 -78579527 + L1MC4a LINE L1 5719 5909 -1899 783 176 0 0 chr17 6860163 6860305 -78578175 + AluSp/q SINE Alu 172 313 0 1749 142 14 17 chr17 6860409 6860698 -78577782 - AluSx SINE Alu -21 291 4 258 398 6 0 chr17 6860708 6860869 -78577611 + (CCCCAA)n Simple_repeat Simple_repeat 2 163 0 223 369 23 17 chr17 6860948 6861124 -78577356 + (CCCCAA)n Simple_repeat Simple_repeat 1 177 0 221 209 76 51 chr17 6862700 6862858 -78575622 + (ATGGTG)n Simple_repeat Simple_repeat 3 164 0 580 311 47 0 chr17 6862861 6863073 -78575407 + MIR SINE MIR 12 233 -29 2380 83 6 10 chr17 6863493 6863805 -78574675 + AluSq SINE Alu 1 311 -2 541 231 125 25 chr17 6864416 6864576 -78573904 - MER5B DNA MER1_type -1 177 2 292 263 56 44 chr17 6865240 6865261 -78573219 - L1MA10 LINE L1 -2 6332 6312 597 243 30 82 chr17 6865261 6865528 -78572952 - L1ME2 LINE L1 -13 6151 5899 1423 227 101 55 chr17 6865799 6866324 -78572156 - MLT1H LTR MaLR 0 549 1 2318 95 3 3 chr17 6866346 6866652 -78571828 - AluSp SINE Alu -7 306 1 865 213 14 36 chr17 6866765 6866986 -78571494 - L2 LINE L2 -793 2521 2306 1897 161 11 0 chr17 6867131 6867410 -78571070 - AluJo SINE Alu -30 282 1 462 262 76 0 chr17 6867411 6867556 -78570924 - LTR33 LTR ERVL -40 481 326 272 324 11 45 chr17 6867948 6868124 -78570356 + (CCCCAG)n Simple_repeat Simple_repeat 4 173 0 244 370 6 6 chr17 6868184 6868346 -78570134 + (CCCCAA)n Simple_repeat Simple_repeat 4 165 0 1161 52 8 0 chr17 6868497 6868631 -78569849 + AluSq/x SINE Alu 1 135 -178 2369 101 3 3 chr17 6868632 6868940 -78569540 + AluSc SINE Alu 1 308 -1 698 265 105 13 chr17 6869074 6869387 -78569093 - MER115 DNA AcHobo -313 380 39 906 47 0 58 chr17 6869428 6869599 -78568881 + (TTTC)n Simple_repeat Simple_repeat 2 162 0 2128 95 29 0 chr17 6869601 6869874 -78568606 - AluSp SINE Alu -32 281 1 2400 146 57 5 chr17 6870752 6871157 -78567323 + MSTA LTR MaLR 1 426 -2 9531 164 20 4 chr17 6871160 6872779 -78565701 + MSTA-int LTR MaLR 7 1651 0 2437 125 62 34 chr17 6872779 6872966 -78565514 + MSTA LTR MaLR 1 181 -247 2096 138 0 3 chr17 6872966 6873262 -78565218 - AluSg SINE Alu -15 295 1 2437 125 62 34 chr17 6873262 6873490 -78564990 + MSTA LTR MaLR 181 428 0 543 337 25 10 chr17 6873627 6873826 -78564654 + MIR SINE MIR 32 233 -29 307 73 0 0 chr17 6875102 6875143 -78563337 + L1MA9 LINE L1 5910 5950 -362 2392 97 0 0 chr17 6875143 6875441 -78563039 + AluSg SINE Alu 1 298 -12 1106 78 0 0 chr17 6877222 6877363 -78561117 - AluSp/q SINE Alu -2 311 171 2192 108 0 7 chr17 6877365 6877661 -78560819 - AluSx SINE Alu -18 294 1 1248 192 0 5 chr17 6877745 6877964 -78560516 - AluJo SINE Alu -11 301 84 2465 67 7 0 chr17 6878271 6878570 -78559910 + AluSx SINE Alu 1 301 -11 876 159 62 40 chr17 6878660 6878836 -78559644 + MLT1C LTR MaLR 38 217 -250 1851 105 6 125 chr17 6878837 6879180 -78559300 + AluSx SINE Alu 1 302 0 2180 78 0 7 chr17 6880027 6880297 -78558183 - AluSc SINE Alu -41 268 1 364 253 95 56 chr17 6880467 6880729 -78557751 + MLT1J2 LTR MaLR 163 443 -7 315 317 56 21 chr17 6880908 6881050 -78557430 - L2 LINE L2 -1252 2062 1916 246 250 37 81 chr17 6881468 6881533 -78556947 - L1M LINE L1 -790 5390 5333 2233 107 0 20 chr17 6881533 6881832 -78556648 - AluSc SINE Alu -16 293 1 246 250 37 81 chr17 6881832 6881902 -78556578 - L1M LINE L1 -847 5333 5261 302 223 122 47 chr17 6881902 6882050 -78556430 - L1MEc LINE L1 -4807 1589 1431 236 347 42 21 chr17 6882747 6882842 -78555638 - MER91C DNA MER1_type -30 110 14 2319 121 0 13 chr17 6883230 6883544 -78554936 + AluSq SINE Alu 2 311 -2 2349 100 3 0 chr17 6883663 6883963 -78554517 - AluSx SINE Alu -11 301 1 2148 43 90 14 chr17 6884087 6884365 -78554115 - AluY SINE Alu -12 299 1 290 256 44 80 chr17 6885035 6885114 -78553366 + MIR SINE MIR 103 176 -86 2199 109 3 3 chr17 6885114 6885407 -78553073 - AluSq SINE Alu -18 295 3 290 256 44 80 chr17 6885407 6885464 -78553016 + MIR SINE MIR 176 234 -28 1496 290 100 19 chr17 6888341 6889092 -78549388 + L2 LINE L2 1562 2373 -941 189 195 0 0 chr17 6889365 6889406 -78549074 + (TG)n Simple_repeat Simple_repeat 2 42 0 1000 147 26 103 chr17 6890446 6890678 -78547802 + MER20 DNA MER1_type 6 219 0 2243 91 7 17 chr17 6893384 6893680 -78544800 - AluSx SINE Alu -16 296 4 228 191 0 21 chr17 6894390 6894437 -78544043 + MLT1K LTR MaLR 509 554 -34 528 243 53 32 chr17 6895572 6895761 -78542719 - LTR33 LTR ERVL -2 519 327 10184 144 35 39 chr17 6895857 6896831 -78541649 + L1MA3 LINE L1 2191 3168 -4397 1668 56 0 95 chr17 6896831 6897062 -78541418 - AluSc SINE Alu -100 209 1 10184 144 35 39 chr17 6897062 6899787 -78538693 + L1MA3 LINE L1 3168 5855 -1710 14253 34 5 11 chr17 6899788 6902908 -78535572 + L1PA4 LINE L1 3046 6154 -1 22 35 0 0 chr17 6902952 6902981 -78535499 + AT_rich Low_complexity Low_complexity 1 29 0 5219 123 21 25 chr17 6903107 6903288 -78535192 + L1MA3 LINE L1 5896 6076 -1648 444 19 0 0 chr17 6903288 6903341 -78535139 + (CA)n Simple_repeat Simple_repeat 2 54 0 5219 123 21 25 chr17 6903341 6904751 -78533729 + L1MA3 LINE L1 6076 7478 -246 3681 114 6 4 chr17 6904751 6905261 -78533219 + MER9 LTR ERVK 1 511 0 32807 58 19 18 chr17 6905261 6906018 -78532462 + HERVK9 LTR ERVK 1 755 -5161 187 233 0 83 chr17 6906018 6906078 -78532402 + MER5B DNA MER1_type 55 109 -69 32807 58 19 18 chr17 6906078 6909421 -78529059 + HERVK9 LTR ERVK 755 4166 -1750 6561 70 21 1 chr17 6909417 6910243 -78528237 + HERVK9 LTR ERVK 4793 5634 -282 * 2342 105 17 12 chr17 6910268 6910620 -78527860 + HERVK9 LTR ERVK 4936 5916 0 3817 93 0 10 chr17 6910620 6911136 -78527344 + MER9 LTR ERVK 1 511 0 1538 88 20 36 chr17 6911136 6911386 -78527094 + L1MA2 LINE L1 6057 6302 -2 555 329 44 16 chr17 6911582 6911831 -78526649 + MIR SINE MIR 7 262 0 402 57 0 0 chr17 6912003 6912056 -78526424 + (T)n Simple_repeat Simple_repeat 1 53 0 978 148 216 26 chr17 6912296 6912689 -78525791 + MER51A LTR ERV1 1 633 -1 1223 152 186 26 chr17 6912690 6912954 -78525526 + MER51A-int LTR ERV1 1 306 -7510 262 270 0 0 chr17 6913216 6913290 -78525190 + MER51A-int LTR ERV1 976 1049 -5480 1406 276 59 71 chr17 6913673 6914701 -78523779 + MER51A-int LTR ERV1 4779 5805 -1951 2487 44 0 0 chr17 6914754 6915052 -78523428 - AluY SINE Alu -13 298 1 1946 99 4 4 chr17 6915052 6915324 -78523156 - AluSp SINE Alu -19 294 23 363 303 47 38 chr17 6915530 6915741 -78522739 + MER51A-int LTR ERV1 4654 4866 -1810 225 0 0 0 chr17 6915812 6915837 -78522643 + (T)n Simple_repeat Simple_repeat 1 25 0 1791 186 58 0 chr17 6915909 6916221 -78522259 + MER51A-int LTR ERV1 7487 7816 0 820 128 195 46 chr17 6916223 6916418 -78522062 + MER51A LTR ERV1 1 224 -410 * 1175 128 78 25 chr17 6916415 6916619 -78521861 + MER51A LTR ERV1 420 634 0 353 224 56 37 chr17 6916620 6916727 -78521753 - L1M4 LINE L1 -1276 4870 4762 515 290 52 8 chr17 6916743 6916995 -78521485 - L1ME LINE L1 -3322 2758 2496 594 272 46 57 chr17 6916996 6917367 -78521113 - L1ME LINE L1 -5703 367 1 1357 125 0 42 chr17 6917549 6917606 -78520874 + L1PA15 LINE L1 5444 5502 -663 2298 53 0 7 chr17 6917606 6917922 -78520558 + AluY SINE Alu 1 314 0 1357 125 0 42 chr17 6917922 6918079 -78520401 + L1PA15 LINE L1 5502 5650 -515 2574 109 6 3 chr17 6918089 6918436 -78520044 - THE1B LTR MaLR -16 348 1 3590 116 4 0 chr17 6918436 6918952 -78519528 + L1PA15 LINE L1 5646 6163 -2 4272 144 57 54 chr17 6919168 6919461 -78519019 - L1MB5 LINE L1 0 6174 5883 207 0 0 0 chr17 6919461 6919484 -78518996 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2115 99 0 0 chr17 6919484 6919766 -78518714 - AluSg SINE Alu -28 282 1 4272 144 57 54 chr17 6919766 6920359 -78518121 - L1MB5 LINE L1 -290 5884 5284 266 295 115 105 chr17 6920471 6920656 -78517824 - MLT1K LTR MaLR -129 459 277 1048 65 0 7 chr17 6920656 6920794 -78517686 + L1PA7 LINE L1 6011 6147 -7 1762 166 0 23 chr17 6920798 6920970 -78517510 - AluJo SINE Alu -7 305 142 2088 60 4 4 chr17 6920970 6921235 -78517245 - AluY SINE Alu -5 306 42 1762 166 0 23 chr17 6921235 6921370 -78517110 - AluJo SINE Alu -170 142 5 266 295 115 105 chr17 6921370 6921569 -78516911 - MLT1K LTR MaLR -313 275 66 5539 155 31 21 chr17 6922341 6924132 -78514348 - L1MA4 LINE L1 -11 6289 4464 298 193 0 0 chr17 6924574 6924631 -78513849 - MLT1K LTR MaLR -8 580 524 4671 171 9 38 chr17 6925885 6926645 -78511835 - L1P LINE L1 -782 5364 4658 1981 138 0 3 chr17 6926645 6926950 -78511530 - AluSx SINE Alu -8 304 1 4671 171 9 38 chr17 6926950 6927203 -78511277 - L1P LINE L1 -1488 4658 4399 1628 173 68 0 chr17 6927190 6927526 -78510954 - L1MA4 LINE L1 -1983 4163 3805 * 4939 155 16 39 chr17 6927525 6928012 -78510468 + L1MA7 LINE L1 5341 5797 -494 2241 106 0 0 chr17 6928012 6928323 -78510157 + AluSx SINE Alu 1 311 -1 4939 155 16 39 chr17 6928323 6928807 -78509673 + L1MA7 LINE L1 5797 6290 -1 805 179 0 15 chr17 6928965 6929099 -78509381 + AluSq/x SINE Alu 4 135 -178 1862 124 3 28 chr17 6929099 6929185 -78509295 + AluSg SINE Alu 1 88 -223 6877 62 27 25 chr17 6929185 6930080 -78508400 + MER11D LTR ERVK 1 897 0 1862 124 3 28 chr17 6930080 6930311 -78508169 + AluSg SINE Alu 88 311 0 917 211 0 12 chr17 6930313 6930479 -78508001 + FRAM SINE Alu 1 164 -2 979 261 67 46 chr17 6930515 6930605 -78507875 - L1M4 LINE L1 -3382 2764 2677 656 224 0 8 chr17 6930605 6930730 -78507750 + FLAM_A SINE Alu 2 125 -8 979 261 67 46 chr17 6930730 6931058 -78507422 - L1M4 LINE L1 -3469 2677 2326 2162 99 0 16 chr17 6931058 6931371 -78507109 + AluSg1 SINE Alu 1 308 -1 979 261 67 46 chr17 6931371 6931564 -78506916 - L1M4 LINE L1 -3820 2326 2139 554 113 0 0 chr17 6931954 6932034 -78506446 + AluSg/x SINE Alu 218 297 -13 810 136 0 0 chr17 6933172 6933290 -78505190 - AluJo SINE Alu -108 204 87 1082 119 85 0 chr17 6933291 6933468 -78505012 - MER46B DNA MER2_type -169 67 1 1677 154 73 20 chr17 6933683 6933784 -78504696 - L1MB3 LINE L1 -7 6176 6082 2316 68 0 13 chr17 6933784 6934093 -78504387 - AluSc SINE Alu -4 305 1 1677 154 73 20 chr17 6934093 6934335 -78504145 - L1MB3 LINE L1 -101 6082 5815 630 128 11 0 chr17 6934337 6934431 -78504049 - AluJo/FRAM SINE Alu -25 287 193 2041 81 0 28 chr17 6934433 6934716 -78503764 - AluSq SINE Alu -38 275 1 695 188 0 7 chr17 6934720 6934858 -78503622 - L1PB4 LINE L1 0 6156 6020 357 213 22 4 chr17 6935087 6935322 -78503158 + (CA)n Simple_repeat Simple_repeat 1 239 0 452 261 6 6 chr17 6935333 6935513 -78502967 + (CA)n Simple_repeat Simple_repeat 1 180 0 275 227 8 0 chr17 6935559 6935687 -78502793 + (CA)n Simple_repeat Simple_repeat 1 129 0 334 237 0 48 chr17 6935700 6935833 -78502647 + (CTCA)n Simple_repeat Simple_repeat 4 127 -53 219 103 0 0 chr17 6935833 6935872 -78502608 + (CA)n Simple_repeat Simple_repeat 1 39 0 334 237 0 48 chr17 6935872 6935924 -78502556 + (CTCA)n Simple_repeat Simple_repeat 127 180 0 * 393 273 12 0 chr17 6935915 6936295 -78502185 + (CA)n Simple_repeat Simple_repeat 1 384 0 339 208 0 0 chr17 6936316 6936441 -78502039 + (CA)n Simple_repeat Simple_repeat 1 125 0 284 0 28 0 chr17 6936560 6936596 -78501884 + (CCCCAG)n Simple_repeat Simple_repeat 1 37 0 265 233 17 0 chr17 6938189 6938249 -78500231 + (CTGGGG)n Simple_repeat Simple_repeat 5 65 0 2026 112 7 3 chr17 6938348 6938653 -78499827 - AluSx SINE Alu -2 310 5 433 289 16 0 chr17 6939594 6939715 -78498765 - MIR SINE MIR -118 144 22 2216 89 3 0 chr17 6939894 6940214 -78498266 + AluSx SINE Alu 1 321 0 2351 86 0 0 chr17 6940219 6940520 -78497960 + AluSq SINE Alu 1 301 -12 2168 94 3 0 chr17 6940852 6941149 -78497331 + AluSq SINE Alu 1 298 -15 508 302 16 16 chr17 6941149 6941341 -78497139 + L1ME3A LINE L1 5974 6165 -5 654 198 0 9 chr17 6941443 6941589 -78496891 - FLAM_A SINE Alu 0 145 1 1461 130 153 11 chr17 6941802 6942063 -78496417 + AluJo SINE Alu 1 298 -4 2149 97 0 13 chr17 6942094 6942394 -78496086 + AluSg1 SINE Alu 1 296 -13 2271 71 0 34 chr17 6942484 6942806 -78495674 + AluY SINE Alu 1 311 0 1731 159 0 3 chr17 6942812 6943095 -78495385 + AluSx SINE Alu 1 282 -30 1023 54 0 0 chr17 6943098 6943264 -78495216 + AluSc SINE Alu 152 317 0 2003 107 3 7 chr17 6943936 6944234 -78494246 + AluSx SINE Alu 1 297 -15 405 0 0 0 chr17 6944237 6944282 -78494198 + (TA)n Simple_repeat Simple_repeat 2 46 0 333 308 75 15 chr17 6944503 6944636 -78493844 + MIR SINE MIR 116 256 -6 2085 84 0 24 chr17 6945477 6945773 -78492707 - AluSg SINE Alu -21 289 1 559 256 98 6 chr17 6945881 6946045 -78492435 - MIR SINE MIR 0 262 84 389 290 233 40 chr17 6946220 6946624 -78491856 + L2 LINE L2 2827 3308 -5 2042 72 7 31 chr17 6946893 6947218 -78491262 + AluSq SINE Alu 1 318 0 2138 113 0 3 chr17 6947426 6947726 -78490754 + AluSq SINE Alu 1 299 -14 285 276 31 10 chr17 6947736 6947834 -78490646 - MER5B DNA MER1_type 0 178 79 2092 111 3 0 chr17 6948466 6948764 -78489716 + AluSq SINE Alu 1 299 -14 2197 98 3 0 chr17 6948846 6949153 -78489327 + AluSg SINE Alu 1 308 -2 235 209 0 0 chr17 6950510 6950553 -78487927 + MER91A DNA MER1_type 119 161 -35 1167 81 6 0 chr17 6950599 6950760 -78487720 - AluSq SINE Alu -4 309 148 266 62 0 0 chr17 6950760 6950792 -78487688 - Alu SINE Alu -266 37 6 388 241 11 59 chr17 6952007 6952194 -78486286 + GA-rich Low_complexity Low_complexity 2 179 0 290 256 0 80 chr17 6952384 6952560 -78485920 + GA-rich Low_complexity Low_complexity 5 166 0 2151 83 40 7 chr17 6954385 6954686 -78483794 + AluY SINE Alu 1 311 0 351 308 53 57 chr17 6955022 6955285 -78483195 - L2 LINE L2 -831 2483 2222 428 214 22 160 chr17 6956992 6957126 -78481354 - L1MC5 LINE L1 -428 7533 7467 1975 105 40 17 chr17 6957126 6957422 -78481058 - AluSx SINE Alu -9 303 1 428 214 22 160 chr17 6957422 6957605 -78480875 - L1MC5 LINE L1 -494 7467 7260 235 248 168 30 chr17 6957738 6957839 -78480641 - L1MC5 LINE L1 -741 7220 7106 2144 120 3 0 chr17 6957839 6958139 -78480341 + AluSx SINE Alu 1 301 -11 1228 126 12 89 chr17 6958144 6958206 -78480274 + AluSg/x SINE Alu 83 148 -162 2279 87 0 3 chr17 6958206 6958504 -78479976 + AluSg1 SINE Alu 1 297 -12 1228 126 12 89 chr17 6958504 6958688 -78479792 + AluSg/x SINE Alu 148 310 0 559 197 108 100 chr17 6958700 6958829 -78479651 - L1MC5 LINE L1 -861 7100 6973 2254 107 0 3 chr17 6958829 6959139 -78479341 - AluSq SINE Alu -4 309 1 559 197 108 100 chr17 6959139 6959335 -78479145 - L1MC5 LINE L1 -988 6973 6769 2490 58 0 6 chr17 6959335 6959648 -78478832 + AluY SINE Alu 1 311 0 559 197 108 100 chr17 6959648 6959711 -78478769 - L1MC5 LINE L1 -1192 6769 6708 780 320 62 52 chr17 6959715 6960177 -78478303 - L1M4 LINE L1 -1369 4777 4321 2355 87 3 10 chr17 6960177 6960488 -78477992 - AluSp SINE Alu -4 309 1 2192 99 0 13 chr17 6960490 6960804 -78477676 - AluSx SINE Alu -2 310 1 780 320 62 52 chr17 6960804 6960968 -78477512 - L1M4 LINE L1 -1825 4321 4160 814 254 78 10 chr17 6960968 6961173 -78477307 + MER20 DNA MER1_type 1 219 0 780 320 62 52 chr17 6961173 6961239 -78477241 - L1M4 LINE L1 -1986 4160 4096 2290 103 0 0 chr17 6961239 6961551 -78476929 + AluSq SINE Alu 1 312 -1 780 320 62 52 chr17 6961551 6961743 -78476737 - L1M4 LINE L1 -2050 4096 3879 1400 149 65 19 chr17 6961743 6962004 -78476476 - AluJo SINE Alu -39 273 1 393 356 115 0 chr17 6962016 6962328 -78476152 - L1M4 LINE L1 -2277 3869 3522 210 258 0 0 chr17 6964050 6964112 -78474368 + (CA)n Simple_repeat Simple_repeat 1 62 0 289 256 0 58 chr17 6965337 6965493 -78472987 + C-rich Low_complexity Low_complexity 4 150 0 1020 141 39 0 chr17 6965677 6965833 -78472647 - FRAM SINE Alu -16 160 1 253 352 6 22 chr17 6966654 6966833 -78471647 + GA-rich Low_complexity Low_complexity 2 177 0 207 0 0 0 chr17 6966932 6966955 -78471525 + (CAGC)n Simple_repeat Simple_repeat 2 24 0 482 186 0 28 chr17 6967267 6967412 -78471068 + (CA)n Simple_repeat Simple_repeat 2 142 0 1753 134 7 22 chr17 6969091 6969366 -78469114 + AluJb SINE Alu 25 295 -17 1729 113 32 0 chr17 6969395 6969642 -78468838 + AluSx SINE Alu 46 300 -12 262 214 0 57 chr17 6971283 6971419 -78467061 + G-rich Low_complexity Low_complexity 1 128 0 492 165 0 0 chr17 6972245 6972324 -78466156 + FLAM SINE Alu 50 128 -15 2092 105 0 0 chr17 6972328 6972613 -78465867 + AluSg SINE Alu 1 285 -25 21 0 0 0 chr17 6972613 6972634 -78465846 + AT_rich Low_complexity Low_complexity 1 21 0 2228 99 0 6 chr17 6972656 6972969 -78465511 - AluSx SINE Alu 0 312 2 249 288 0 0 chr17 6974427 6974486 -78463994 + L2 LINE L2 3252 3310 -3 189 187 40 13 chr17 6976842 6976917 -78461563 + G-rich Low_complexity Low_complexity 2 78 0 209 192 0 19 chr17 6977177 6977229 -78461251 + GA-rich Low_complexity Low_complexity 3 53 0 224 398 16 8 chr17 6977946 6978069 -78460411 + L3 LINE CR1 1448 1571 -6 21 36 0 0 chr17 6979734 6979762 -78458718 + GC_rich Low_complexity Low_complexity 1 28 0 198 0 0 0 chr17 6984175 6984197 -78454283 + (CCCCCA)n Simple_repeat Simple_repeat 3 24 0 569 222 74 37 chr17 6986381 6986570 -78451910 - MER91A DNA MER1_type 0 196 1 371 261 96 0 chr17 6987776 6987891 -78450589 + L1ME3 LINE L1 5837 5962 -208 303 235 0 121 chr17 6987925 6988091 -78450389 + L1ME3 LINE L1 5940 6085 -77 2054 118 0 3 chr17 6988153 6988450 -78450030 - AluSx SINE Alu -16 296 1 2071 92 64 0 chr17 6990750 6991032 -78447448 + AluSq SINE Alu 1 300 -13 2196 116 10 0 chr17 6991146 6991448 -78447032 + AluSx SINE Alu 1 305 -7 252 346 48 0 chr17 6992139 6992243 -78446237 - MIR SINE MIR -107 155 47 2446 55 7 3 chr17 6992373 6992683 -78445797 + AluY SINE Alu 1 311 0 2158 60 0 18 chr17 6993028 6993313 -78445167 - AluY SINE Alu -13 298 19 24 0 0 0 chr17 6994002 6994026 -78444454 + GC_rich Low_complexity Low_complexity 1 24 0 243 146 0 0 chr17 6995728 6995769 -78442711 + (TTC)n Simple_repeat Simple_repeat 1 41 0 21 0 0 0 chr17 6997479 6997500 -78440980 + GC_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr17 6997565 6997602 -78440878 + GC_rich Low_complexity Low_complexity 1 37 0 236 326 11 33 chr17 6997859 6998040 -78440440 + C-rich Low_complexity Low_complexity 2 178 0 25 31 0 0 chr17 6999045 6999077 -78439403 + GC_rich Low_complexity Low_complexity 1 32 0 294 98 33 16 chr17 6999082 6999143 -78439337 + CT-rich Low_complexity Low_complexity 1 62 0 2003 125 7 10 chr17 7004455 7004590 -78433890 + AluJo SINE Alu 1 135 -177 2217 108 0 3 chr17 7004590 7004895 -78433585 + AluSg SINE Alu 1 304 -6 2003 125 7 10 chr17 7004895 7005062 -78433418 + AluJo SINE Alu 135 302 -10 2311 87 0 3 chr17 7005067 7005377 -78433103 - AluSg SINE Alu -1 309 1 21 36 0 0 chr17 7005377 7005405 -78433075 + AT_rich Low_complexity Low_complexity 1 28 0 256 297 103 32 chr17 7006980 7007037 -78431443 - MIR SINE MIR 0 262 210 2195 112 0 0 chr17 7007037 7007340 -78431140 - AluSg SINE Alu -1 309 7 256 297 103 32 chr17 7007340 7007437 -78431043 - MIR SINE MIR -52 210 97 328 267 100 0 chr17 7007439 7007559 -78430921 + L2 LINE L2 3174 3305 -8 2395 81 0 0 chr17 7007560 7007867 -78430613 + AluSc SINE Alu 1 307 -2 2274 98 3 3 chr17 7007930 7008236 -78430244 - AluSg SINE Alu -4 306 1 2009 104 35 3 chr17 7009215 7009504 -78428976 + AluSx SINE Alu 1 298 -14 40 67 0 0 chr17 7010884 7010959 -78427521 + GC_rich Low_complexity Low_complexity 1 75 0 296 277 0 50 chr17 7011183 7011284 -78427196 + G-rich Low_complexity Low_complexity 3 98 0 196 321 0 0 chr17 7012647 7012703 -78425777 + L2 LINE L2 3258 3313 0 182 167 0 24 chr17 7012796 7012838 -78425642 - L2 LINE L2 -665 2649 2609 294 331 60 23 chr17 7012849 7012982 -78425498 - L2 LINE L2 -1 3312 3175 2381 64 7 3 chr17 7013293 7013591 -78424889 + AluSp SINE Alu 1 299 -14 352 296 301 10 chr17 7013826 7014022 -78424458 - MIR SINE MIR -2 260 8 224 241 0 0 chr17 7014490 7014544 -78423936 + T-rich Low_complexity Low_complexity 1 54 0 307 330 106 28 chr17 7014605 7014784 -78423696 - L2 LINE L2 0 3313 3121 2355 54 3 10 chr17 7014823 7015119 -78423361 + AluY SINE Alu 1 294 -17 2116 91 24 3 chr17 7015361 7015648 -78422832 + AluSx SINE Alu 3 295 -17 1975 117 24 0 chr17 7015652 7015943 -78422537 + AluSg1 SINE Alu 3 300 -9 867 138 0 0 chr17 7016727 7016850 -78421630 - AluJb SINE Alu -189 123 1 229 336 64 0 chr17 7016884 7016994 -78421486 - MIR SINE MIR -38 224 108 1568 193 10 20 chr17 7017011 7017316 -78421164 - AluJb SINE Alu -10 302 1 2070 123 0 0 chr17 7017369 7017653 -78420827 + AluSg SINE Alu 3 286 -24 437 87 0 0 chr17 7017662 7017731 -78420749 + MER41B LTR ERV1 480 548 -87 2245 114 0 0 chr17 7017746 7018044 -78420436 + AluSx SINE Alu 1 298 -14 24 32 0 0 chr17 7019486 7019517 -78418963 + AT_rich Low_complexity Low_complexity 1 31 0 25 31 0 0 chr17 7021030 7021062 -78417418 + GC_rich Low_complexity Low_complexity 1 32 0 28 79 0 0 chr17 7022094 7022157 -78416323 + GC_rich Low_complexity Low_complexity 1 63 0 1667 164 13 10 chr17 7023182 7023486 -78414994 - AluJb SINE Alu -7 305 1 2234 102 0 10 chr17 7023867 7024170 -78414310 - AluSq SINE Alu -13 300 1 738 204 21 14 chr17 7024239 7024381 -78414099 - FRAM SINE Alu -25 151 9 2199 93 0 3 chr17 7024391 7024680 -78413800 - AluSx SINE Alu -16 296 9 2484 55 0 10 chr17 7024698 7025010 -78413470 - AluY SINE Alu 0 311 3 1836 114 8 4 chr17 7025010 7025264 -78413216 - AluSx SINE Alu -57 255 1 189 0 0 0 chr17 7025270 7025291 -78413189 + (T)n Simple_repeat Simple_repeat 1 21 0 2313 96 0 6 chr17 7025305 7025617 -78412863 - AluSg SINE Alu 0 310 1 715 136 9 0 chr17 7025635 7025745 -78412735 - HY1 scRNA scRNA 0 112 2 265 267 222 11 chr17 7025802 7025982 -78412498 + L2 LINE L2 2531 2748 -566 2082 43 43 43 chr17 7025983 7026298 -78412182 + AluY SINE Alu 1 315 0 532 250 89 72 chr17 7026352 7026712 -78411768 + L2 LINE L2 2869 3234 -79 2198 130 0 9 chr17 7026786 7027101 -78411379 - AluSx SINE Alu 0 312 1 347 273 176 91 chr17 7027102 7027143 -78411337 - L2 LINE L2 -10 3303 3267 1061 164 6 0 chr17 7027143 7027302 -78411178 + FRAM SINE Alu 1 160 -6 2135 109 0 3 chr17 7027308 7027601 -78410879 + AluSg SINE Alu 1 292 -18 2038 88 26 39 chr17 7027609 7027917 -78410563 + AluSg SINE Alu 1 304 -6 2335 94 0 0 chr17 7027917 7028216 -78410264 + AluSq SINE Alu 1 299 -14 347 273 176 91 chr17 7028216 7028443 -78410037 - L2 LINE L2 -56 3257 2982 2165 114 0 13 chr17 7028443 7028750 -78409730 + AluSq SINE Alu 1 303 -10 347 273 176 91 chr17 7028750 7028804 -78409676 - L2 LINE L2 -331 2982 2934 688 180 78 106 chr17 7028857 7029074 -78409406 - MER20 DNA MER1_type 0 219 9 2131 115 10 0 chr17 7029154 7029450 -78409030 + AluSp SINE Alu 1 299 -14 362 286 97 39 chr17 7029459 7029674 -78408806 - L2 LINE L2 -2167 1147 946 1805 148 0 43 chr17 7029674 7029979 -78408501 + AluJb SINE Alu 3 294 -18 2060 75 45 24 chr17 7029979 7030292 -78408188 + AluY SINE Alu 1 311 0 362 286 97 39 chr17 7030292 7030334 -78408146 - L2 LINE L2 -2367 947 874 799 168 29 92 chr17 7030374 7030547 -78407933 + AluSq SINE Alu 1 162 -151 511 66 0 0 chr17 7030549 7030625 -78407855 + Alu SINE Alu 226 301 0 855 164 0 0 chr17 7030636 7030770 -78407710 + AluSg/x SINE Alu 161 294 -18 1979 132 24 0 chr17 7030775 7031064 -78407416 + AluSx SINE Alu 2 297 -15 954 321 106 27 chr17 7031066 7031393 -78407087 - L2 LINE L2 -2474 840 540 2293 91 0 0 chr17 7031393 7031691 -78406789 + AluSg SINE Alu 1 298 -12 2177 76 10 16 chr17 7031691 7031995 -78406485 + AluY SINE Alu 1 302 -9 954 321 106 27 chr17 7031995 7032268 -78406212 - L2 LINE L2 -2773 541 191 284 316 20 7 chr17 7032602 7032754 -78405726 + L1M4 LINE L1 3605 3758 -2388 2107 123 0 16 chr17 7032754 7032891 -78405589 + AluSx SINE Alu 1 139 -173 2176 67 0 0 chr17 7032891 7033161 -78405319 + AluY SINE Alu 37 306 -5 2107 123 0 16 chr17 7033161 7033333 -78405147 + AluSx SINE Alu 139 305 -7 262 316 0 60 chr17 7033333 7033379 -78405101 + L1M4 LINE L1 3844 3891 -2255 2178 116 0 0 chr17 7033379 7033681 -78404799 + AluY SINE Alu 1 302 -9 2438 75 3 0 chr17 7033685 7033991 -78404489 + AluSp SINE Alu 1 307 -6 262 316 0 60 chr17 7033991 7034107 -78404373 + L1M4 LINE L1 3894 4001 -2145 309 264 27 78 chr17 7034137 7034269 -78404211 + L1M4 LINE L1 4075 4212 -1934 2143 118 3 0 chr17 7034269 7034575 -78403905 + AluSg SINE Alu 2 308 -2 309 264 27 78 chr17 7034575 7034628 -78403852 + L1M4 LINE L1 4212 4246 -1900 2114 112 10 0 chr17 7034628 7034933 -78403547 + AluSp SINE Alu 2 309 -4 309 264 27 78 chr17 7034933 7035004 -78403476 + L1M4 LINE L1 4246 4319 -1827 315 122 0 0 chr17 7035067 7035116 -78403364 + (A)n Simple_repeat Simple_repeat 1 49 0 1833 170 23 3 chr17 7035116 7035422 -78403058 + AluJb SINE Alu 1 312 0 1082 331 66 64 chr17 7035429 7035455 -78403025 + L1M4 LINE L1 4345 4369 -1777 1942 127 0 3 chr17 7035455 7035760 -78402720 + AluSg SINE Alu 1 304 0 1082 331 66 64 chr17 7035760 7035989 -78402491 + L1M4 LINE L1 4369 4596 -1550 2082 121 0 3 chr17 7035989 7036287 -78402193 + AluSq SINE Alu 1 297 -16 1082 331 66 64 chr17 7036287 7036438 -78402042 + L1M4 LINE L1 4596 4745 -1401 2221 108 3 6 chr17 7036438 7036752 -78401728 + AluSq SINE Alu 1 313 0 1082 331 66 64 chr17 7036752 7037160 -78401320 + L1M4 LINE L1 4745 5167 -979 2022 138 0 0 chr17 7037160 7037457 -78401023 + AluSx SINE Alu 1 297 -15 1082 331 66 64 chr17 7037457 7037543 -78400937 + L1M4 LINE L1 5167 5251 -895 2287 104 3 0 chr17 7037550 7037858 -78400622 - AluSp SINE Alu -4 309 1 2163 89 0 0 chr17 7037869 7038175 -78400305 - AluY SINE Alu 0 306 1 2148 113 7 0 chr17 7038267 7038569 -78399911 + AluSx SINE Alu 1 304 -8 730 225 33 0 chr17 7038665 7038816 -78399664 + AluJb SINE Alu 140 295 -17 2163 110 3 7 chr17 7038818 7039127 -78399353 + AluSp SINE Alu 2 309 -4 2072 118 10 0 chr17 7039301 7039597 -78398883 - AluSx SINE Alu -13 299 1 205 362 92 28 chr17 7039916 7040134 -78398346 - L2 LINE L2 -708 2606 2375 304 268 27 80 chr17 7042412 7042524 -78395956 - MIR SINE MIR -75 187 82 220 261 0 0 chr17 7046451 7046497 -78391983 + C-rich Low_complexity Low_complexity 2 47 0 2292 68 13 7 chr17 7046695 7047002 -78391478 - AluY SINE Alu -1 310 2 1911 118 28 14 chr17 7048446 7048735 -78389745 - AluSx SINE Alu -13 299 7 959 154 91 11 chr17 7051142 7051317 -78387163 - MER5A DNA MER1_type 0 189 1 376 306 11 17 chr17 7053937 7054117 -78384363 + (CCG)n Simple_repeat Simple_repeat 2 180 0 21 36 0 0 chr17 7054324 7054352 -78384128 + GC_rich Low_complexity Low_complexity 1 28 0 943 86 0 0 chr17 7054831 7054959 -78383521 - AluSg/x SINE Alu 0 312 185 1976 99 7 3 chr17 7055055 7055357 -78383123 - AluSx SINE Alu 0 303 1 243 215 32 75 chr17 7055482 7055575 -78382905 + L2 LINE L2 2910 2998 -315 319 298 144 21 chr17 7055605 7055793 -78382687 + L2 LINE L2 3102 3312 -1 258 56 0 0 chr17 7055865 7055914 -78382566 + Alu SINE Alu 1 34 -267 2316 112 0 3 chr17 7056590 7056904 -78381576 + AluSq SINE Alu 1 313 0 1935 106 6 45 chr17 7056918 7057055 -78381425 + AluSx SINE Alu 1 142 -170 2085 78 13 42 chr17 7057055 7057362 -78381118 + AluY SINE Alu 1 298 -13 1935 106 6 45 chr17 7057362 7057536 -78380944 + AluSx SINE Alu 142 300 -12 1509 74 79 0 chr17 7057538 7057741 -78380739 + AluY SINE Alu 1 219 -92 1891 141 0 0 chr17 7057841 7058117 -78380363 - AluSx SINE Alu -36 276 1 1809 149 17 7 chr17 7058194 7058496 -78379984 - AluJb SINE Alu -7 305 1 668 267 172 9 chr17 7058602 7058934 -78379546 + MLT1G3 LTR MaLR 8 357 -173 2426 57 0 0 chr17 7059072 7059368 -78379112 + AluY SINE Alu 1 296 -15 395 328 111 16 chr17 7059570 7059759 -78378721 - L2 LINE L2 0 3313 3107 1207 131 0 0 chr17 7059804 7059979 -78378501 - AluSg/x SINE Alu -4 308 134 1953 59 4 0 chr17 7059979 7060217 -78378263 - AluSx SINE Alu -15 297 59 1824 146 0 55 chr17 7060394 7060544 -78377936 + AluJo SINE Alu 1 125 -187 2268 90 7 0 chr17 7060544 7060844 -78377636 + AluSg SINE Alu 1 302 -8 1824 146 0 55 chr17 7060844 7061021 -78377459 + AluJo SINE Alu 125 310 -2 2017 108 4 0 chr17 7061180 7061481 -78376999 + AluSx SINE Alu 6 307 0 235 340 65 39 chr17 7061574 7061806 -78376674 - L2 LINE L2 -224 3048 2811 196 322 163 56 chr17 7061798 7062031 -78376449 - L2 LINE L2 -763 2551 2294 * 1843 87 4 12 chr17 7062122 7062375 -78376105 + AluSc SINE Alu 1 251 -58 545 302 42 0 chr17 7062490 7062679 -78375801 + MIR SINE MIR 6 202 -60 380 295 0 0 chr17 7062679 7062791 -78375689 + MLT1F LTR MaLR 1 112 -430 752 219 18 0 chr17 7062796 7062965 -78375515 + MLT1F LTR MaLR 65 236 -306 2143 97 7 0 chr17 7062965 7063254 -78375226 + AluSx SINE Alu 1 291 -21 268 379 0 24 chr17 7063295 7063419 -78375061 - MIR SINE MIR -108 154 34 2071 136 0 0 chr17 7063504 7063799 -78374681 + AluSx SINE Alu 1 295 -17 229 322 89 0 chr17 7063837 7063927 -78374553 - L2 LINE L2 -46 3226 3129 233 307 74 61 chr17 7063943 7064106 -78374374 + L2 LINE L2 3037 3201 -112 1951 141 10 13 chr17 7064975 7065109 -78373371 + AluJb SINE Alu 1 134 -178 2191 105 0 25 chr17 7065109 7065423 -78373057 + AluSx SINE Alu 1 306 -6 1951 141 10 13 chr17 7065423 7065600 -78372880 + AluJb SINE Alu 134 311 -1 2014 157 0 0 chr17 7066209 7066508 -78371972 + AluSx SINE Alu 1 299 -13 2578 174 32 100 chr17 7066508 7066627 -78371853 + L1ME1 LINE L1 5429 5555 -611 1602 211 0 13 chr17 7066627 7066931 -78371549 + AluJo SINE Alu 1 300 -12 2232 78 0 7 chr17 7066933 7067257 -78371223 + AluY SINE Alu 1 322 0 2168 111 0 0 chr17 7067257 7067545 -78370935 + AluSx SINE Alu 2 289 -23 2107 85 32 3 chr17 7067554 7067837 -78370643 + AluSq SINE Alu 1 291 -22 2578 174 32 100 chr17 7067837 7067928 -78370552 + L1ME1 LINE L1 5563 5659 -507 2346 70 0 13 chr17 7067928 7068230 -78370250 + AluY SINE Alu 1 298 -13 2578 174 32 100 chr17 7068230 7068790 -78369690 + L1ME1 LINE L1 5659 6161 -5 1826 100 85 18 chr17 7068908 7069189 -78369291 + AluSq SINE Alu 1 300 -13 1584 218 26 71 chr17 7069351 7069841 -78368639 + MER21B LTR ERV1 1 468 -395 207 100 0 0 chr17 7069846 7069876 -78368604 + (TCCC)n Simple_repeat Simple_repeat 1 30 0 2136 136 7 0 chr17 7069876 7070185 -78368295 - AluSx SINE Alu -1 311 1 1053 99 0 0 chr17 7070191 7070333 -78368147 - AluJb SINE Alu -170 142 1 1222 210 48 12 chr17 7070333 7070666 -78367814 + MER21B LTR ERV1 461 805 -58 219 349 92 0 chr17 7070809 7070918 -78367562 + L2 LINE L2 2705 2823 -491 * 330 248 165 0 chr17 7070897 7071006 -78367474 + L2 LINE L2 3146 3272 0 217 215 0 159 chr17 7071185 7071292 -78367188 + L2 LINE L2 2946 3035 -237 2261 101 0 0 chr17 7071293 7071591 -78366889 - AluSq SINE Alu -15 298 1 290 179 0 0 chr17 7071778 7071834 -78366646 + FLAM_A SINE Alu 11 66 -67 299 302 32 16 chr17 7071910 7072036 -78366444 + L1MEd LINE L1 561 688 -5431 890 209 12 0 chr17 7072050 7072222 -78366258 + FAM SINE Alu 1 46 -3 241 182 121 0 chr17 7072225 7072291 -78366189 + L1MEd LINE L1 682 755 -5364 368 306 64 25 chr17 7072507 7072638 -78365842 + L1M4 LINE L1 2662 2801 -4048 1849 167 23 3 chr17 7072638 7072944 -78365536 + AluJb SINE Alu 1 312 0 368 306 64 25 chr17 7072944 7072969 -78365511 + L1M4 LINE L1 2801 2824 -4025 * 551 332 66 19 chr17 7072951 7072977 -78365503 + L1M4 LINE L1 5047 5070 -1778 1942 127 0 3 chr17 7072977 7073286 -78365194 + AluSg SINE Alu 1 308 0 551 332 66 19 chr17 7073286 7073514 -78364966 + L1M4 LINE L1 5070 5314 -1534 2068 124 0 3 chr17 7073515 7073813 -78364667 + AluSq SINE Alu 1 297 -16 2207 100 3 7 chr17 7073964 7074264 -78364216 + AluSq SINE Alu 1 299 -14 352 296 301 10 chr17 7074505 7074701 -78363779 - MIR SINE MIR -2 260 8 215 245 0 0 chr17 7075169 7075222 -78363258 + T-rich Low_complexity Low_complexity 1 53 0 307 330 106 28 chr17 7075283 7075462 -78363018 - L2 LINE L2 0 3313 3121 2355 54 3 10 chr17 7075501 7075797 -78362683 + AluY SINE Alu 1 294 -17 2081 90 24 7 chr17 7076039 7076327 -78362153 + AluSx SINE Alu 3 295 -17 1975 117 24 0 chr17 7076331 7076622 -78361858 + AluSg1 SINE Alu 3 300 -9 841 146 0 0 chr17 7077406 7077529 -78360951 - AluJb SINE Alu -189 123 1 229 336 64 0 chr17 7077563 7077673 -78360807 - MIR SINE MIR -38 224 108 1559 102 13 0 chr17 7077853 7078079 -78360401 - AluY SINE Alu -82 229 1 299 227 21 31 chr17 7078083 7078180 -78360300 - L1M4 LINE L1 -492 5682 5587 228 35 0 0 chr17 7078228 7078257 -78360223 + (TTTTTG)n Simple_repeat Simple_repeat 2 30 0 1228 199 12 72 chr17 7078381 7078702 -78359778 - AluJo SINE Alu -10 302 1 212 307 27 0 chr17 7078746 7078821 -78359659 - MIR SINE MIR -102 160 84 2249 96 3 3 chr17 7078858 7079170 -78359310 - AluSx SINE Alu 0 312 1 2213 62 10 16 chr17 7079377 7079683 -78358797 - AluSg SINE Alu -6 304 1 2184 85 23 3 chr17 7079697 7080004 -78358476 - AluSp SINE Alu 0 313 1 276 130 0 0 chr17 7080931 7080977 -78357503 + (CGG)n Simple_repeat Simple_repeat 3 48 0 327 341 93 48 chr17 7083673 7084108 -78354372 - L1M4c LINE L1 -4863 1256 814 180 0 0 0 chr17 7085461 7085481 -78352999 + (T)n Simple_repeat Simple_repeat 1 20 0 207 100 0 0 chr17 7085654 7085684 -78352796 + (GGGGA)n Simple_repeat Simple_repeat 1 30 0 182 256 0 0 chr17 7085868 7085907 -78352573 + L2 LINE L2 253 291 -3023 243 321 12 0 chr17 7087987 7088071 -78350409 + CT-rich Low_complexity Low_complexity 6 90 0 22 88 0 0 chr17 7088616 7088673 -78349807 + GC_rich Low_complexity Low_complexity 1 57 0 23 33 0 0 chr17 7088724 7088754 -78349726 + GC_rich Low_complexity Low_complexity 1 30 0 335 309 149 54 chr17 7089832 7090118 -78348362 + L2 LINE L2 2836 3166 -147 2259 67 27 3 chr17 7090118 7090418 -78348062 + AluSc SINE Alu 1 307 -2 335 309 149 54 chr17 7090418 7090500 -78347980 + L2 LINE L2 3166 3239 -74 1195 133 0 11 chr17 7092162 7092342 -78346138 - AluJo SINE Alu -132 180 3 1860 163 0 0 chr17 7094067 7094367 -78344113 - AluJb SINE Alu -12 300 1 423 349 43 30 chr17 7097775 7098007 -78340473 - MIR SINE MIR -11 251 17 186 278 97 0 chr17 7099444 7099516 -78338964 + MIR SINE MIR 128 206 -56 2109 105 0 3 chr17 7099532 7099828 -78338652 - AluSx SINE Alu -17 295 1 1575 153 41 57 chr17 7101297 7101611 -78336869 - AluJo SINE Alu -3 309 1 4329 183 36 46 chr17 7102214 7103177 -78335303 + LTR13 LTR ERVK 1 954 0 2203 110 0 3 chr17 7103907 7104216 -78334264 - AluSg SINE Alu -1 309 2 2155 119 0 0 chr17 7104227 7104530 -78333950 - AluSx SINE Alu -4 308 6 224 226 30 83 chr17 7106428 7106561 -78331919 + G-rich Low_complexity Low_complexity 6 131 0 1730 186 3 0 chr17 7107051 7107342 -78331138 + AluJo SINE Alu 1 292 -20 833 272 92 13 chr17 7107645 7108140 -78330340 - L2 LINE L2 -69 3244 2709 385 214 0 0 chr17 7108156 7108226 -78330254 - MER91B DNA MER1_type -1 189 120 1995 164 0 0 chr17 7108235 7108547 -78329933 - AluSx SINE Alu 0 312 1 2011 117 7 10 chr17 7108566 7108866 -78329614 - AluSx SINE Alu 0 312 14 340 302 69 25 chr17 7108867 7109026 -78329454 - MER91B DNA MER1_type -13 177 12 239 209 0 75 chr17 7111416 7111483 -78326997 - L2 LINE L2 -18 3254 3193 450 273 120 34 chr17 7112218 7112303 -78326177 + MIR SINE MIR 1 77 -185 2334 64 7 0 chr17 7112303 7112598 -78325882 - AluY SINE Alu -14 297 1 450 273 120 34 chr17 7112598 7112721 -78325759 + MIR SINE MIR 77 227 -35 2412 40 0 13 chr17 7113533 7113833 -78324647 - AluSc SINE Alu -13 296 1 270 247 12 49 chr17 7114014 7114095 -78324385 - L2 LINE L2 0 3313 3236 30 45 0 0 chr17 7114992 7115036 -78323444 + GC_rich Low_complexity Low_complexity 1 44 0 1012 177 21 0 chr17 7119896 7120088 -78318392 + MER20 DNA MER1_type 1 196 -23 730 120 16 0 chr17 7120108 7120233 -78318247 + GA-rich Low_complexity Low_complexity 3 129 0 434 259 28 0 chr17 7120449 7120557 -78317923 - MER5B DNA MER1_type -5 173 63 2343 99 3 0 chr17 7120660 7120972 -78317508 - AluSq SINE Alu 0 313 1 47 14 0 29 chr17 7120983 7121019 -78317461 + AT_rich Low_complexity Low_complexity 1 36 -31 2162 114 3 0 chr17 7121019 7121316 -78317164 - AluSx SINE Alu -14 298 1 47 14 0 29 chr17 7121316 7121348 -78317132 + AT_rich Low_complexity Low_complexity 36 67 0 717 217 0 0 chr17 7121348 7121468 -78317012 - FLAM_C SINE Alu -23 120 1 276 272 0 87 chr17 7121495 7121587 -78316893 - MIR3 SINE MIR -49 159 76 21 0 0 0 chr17 7172508 7172529 -78265951 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr17 7173518 7173546 -78264934 + AT_rich Low_complexity Low_complexity 1 28 0 33 56 0 0 chr17 7174163 7174217 -78264263 + AT_rich Low_complexity Low_complexity 1 54 0 1969 159 72 100 chr17 7174543 7175072 -78263408 - LTR8A LTR ERV1 0 727 214 1109 188 0 0 chr17 7175205 7175423 -78263057 + L1 LINE L1 3592 3809 -2337 22 35 0 0 chr17 7175748 7175777 -78262703 + AT_rich Low_complexity Low_complexity 1 29 0 613 240 134 6 chr17 7175945 7176124 -78262356 + MLT1D LTR MaLR 304 505 0 266 132 19 0 chr17 7176295 7176348 -78262132 + (TA)n Simple_repeat Simple_repeat 1 54 0 1850 171 68 11 chr17 7176355 7176706 -78261774 - MSTB LTR MaLR -55 371 1 678 169 16 0 chr17 7176706 7176830 -78261650 - MSTB-int LTR MaLR 0 1651 1526 380 296 45 0 chr17 7176937 7177069 -78261411 + MIR SINE MIR 121 258 -4 204 40 0 0 chr17 7177266 7177291 -78261189 + (T)n Simple_repeat Simple_repeat 1 25 0 360 293 108 24 chr17 7177697 7177864 -78260616 - MIR3 SINE MIR -3 205 25 31 26 0 0 chr17 7178171 7178209 -78260271 + AT_rich Low_complexity Low_complexity 1 38 0 241 265 44 0 chr17 7178690 7178758 -78259722 + MIR SINE MIR 129 199 -63 694 144 23 0 chr17 7178883 7179015 -78259465 - L1MD1 LINE L1 -1 6241 6107 870 95 0 0 chr17 7179115 7179255 -78259225 + AluSg/x SINE Alu 166 305 0 2151 105 4 0 chr17 7179470 7179747 -78258733 - AluSq SINE Alu -35 278 1 808 103 52 0 chr17 7180371 7180517 -78257963 + AluY SINE Alu 163 314 0 2260 105 10 0 chr17 7180582 7180878 -78257602 - AluSq SINE Alu -14 299 1 473 271 110 7 chr17 7180878 7181024 -78257456 + MIR SINE MIR 95 259 -3 656 273 34 59 chr17 7181043 7181281 -78257199 - MIR SINE MIR -14 248 17 604 94 0 24 chr17 7181347 7181432 -78257048 + AluS SINE Alu 2 84 -229 320 229 10 52 chr17 7181432 7181528 -78256952 - L2 LINE L2 -414 2900 2809 2262 118 0 13 chr17 7181700 7182015 -78256465 - AluSx SINE Alu -1 311 1 736 232 24 66 chr17 7182403 7182474 -78256006 - L2 LINE L2 -538 2776 2704 2277 118 0 6 chr17 7182474 7182788 -78255692 - AluSx SINE Alu 0 312 1 736 232 24 66 chr17 7182788 7182927 -78255553 - L2 LINE L2 -610 2704 2575 1229 172 98 8 chr17 7182927 7183171 -78255309 + MER66B LTR ERV1 1 266 -220 2026 137 7 3 chr17 7183171 7183464 -78255016 + AluSx SINE Alu 1 294 -18 266 175 79 0 chr17 7183471 7183534 -78254946 - L2 LINE L2 -907 2407 2340 2278 109 3 3 chr17 7183535 7183846 -78254634 - AluSq SINE Alu -2 311 1 1416 157 7 19 chr17 7183967 7184265 -78254215 + MER61C LTR ERV1 17 404 -30 875 258 40 6 chr17 7184266 7184363 -78254117 + L1M4 LINE L1 1368 1460 -5082 2351 89 0 43 chr17 7184363 7184689 -78253791 + AluSx SINE Alu 1 312 0 875 258 40 6 chr17 7184689 7184913 -78253567 + L1M4 LINE L1 1460 1700 -4842 * 1069 204 28 34 chr17 7184894 7184926 -78253554 + L1MB8 LINE L1 5709 5740 -438 2229 107 10 7 chr17 7184926 7185236 -78253244 + AluSx SINE Alu 1 311 -1 1069 204 28 34 chr17 7185236 7185527 -78252953 + L1MB8 LINE L1 5740 6030 -148 2284 102 10 13 chr17 7185527 7185832 -78252648 - AluSg SINE Alu -6 304 1 1850 120 25 11 chr17 7185832 7186114 -78252366 - AluSq SINE Alu -5 308 22 822 109 0 0 chr17 7186214 7186324 -78252156 + AluSg/x SINE Alu 195 304 -8 2070 94 3 74 chr17 7186340 7186649 -78251831 + AluSq SINE Alu 16 302 -11 727 243 36 61 chr17 7186672 7186772 -78251708 - MIR SINE MIR -20 242 141 1966 83 55 0 chr17 7186772 7187026 -78251454 - AluSq SINE Alu -45 268 1 727 243 36 61 chr17 7187026 7187172 -78251308 - MIR SINE MIR -121 141 2 291 328 94 43 chr17 7187258 7187655 -78250825 + L2 LINE L2 2457 2897 -375 771 204 0 0 chr17 7187655 7187787 -78250693 + FLAM_A SINE Alu 1 132 -1 291 328 94 43 chr17 7187787 7187985 -78250495 + L2 LINE L2 2897 3084 -188 787 268 43 16 chr17 7188190 7188444 -78250036 + MIR SINE MIR 2 262 0 183 129 32 0 chr17 7188580 7188611 -78249869 - MIR SINE MIR -112 150 119 257 289 33 8 chr17 7190815 7190885 -78247595 + C-rich Low_complexity Low_complexity 1 77 -47 204 40 0 0 chr17 7190885 7190910 -78247570 + (CCG)n Simple_repeat Simple_repeat 3 27 0 257 289 33 8 chr17 7190910 7190960 -78247520 + C-rich Low_complexity Low_complexity 77 124 0 180 0 0 0 chr17 7190979 7190999 -78247481 + (CCG)n Simple_repeat Simple_repeat 1 20 0 2634 39 0 3 chr17 7191727 7192033 -78246447 + AluY SINE Alu 1 305 -6 2048 110 7 29 chr17 7192162 7192470 -78246010 + AluSp SINE Alu 1 301 -12 1222 145 0 6 chr17 7192470 7192649 -78245831 + AluSp SINE Alu 134 311 -2 780 280 85 63 chr17 7196508 7196727 -78241753 - L2 LINE L2 -13 3300 3087 1864 82 0 0 chr17 7196727 7196993 -78241487 - AluSx SINE Alu 0 319 54 752 101 14 79 chr17 7196999 7197138 -78241342 - FLAM_C SINE Alu 0 133 4 780 280 85 63 chr17 7197138 7197594 -78240886 - L2 LINE L2 -230 3083 2583 313 278 56 0 chr17 7197716 7197806 -78240674 + L1ME LINE L1 4959 5053 -1093 545 262 150 30 chr17 7197989 7198301 -78240179 + L1ME LINE L1 5209 5583 -833 2218 109 7 0 chr17 7198301 7198595 -78239885 - AluSq SINE Alu -17 296 1 545 262 150 30 chr17 7198595 7198672 -78239808 + L1ME LINE L1 5583 5649 -767 980 292 128 42 chr17 7198694 7199292 -78239188 + L2 LINE L2 2370 2916 -397 1458 104 54 117 chr17 7199292 7199408 -78239072 - AluJo SINE Alu -15 297 175 2048 129 7 0 chr17 7199408 7199688 -78238792 + AluSg SINE Alu 17 298 -12 2512 67 0 0 chr17 7199688 7199987 -78238493 + AluY SINE Alu 1 299 -12 1458 104 54 117 chr17 7199987 7200186 -78238294 - AluJo SINE Alu -135 177 1 980 292 128 42 chr17 7200186 7200451 -78238029 + L2 LINE L2 2916 3313 0 372 340 49 14 chr17 7200452 7200596 -78237884 + L1ME LINE L1 5653 5801 -320 1779 202 104 49 chr17 7200613 7201073 -78237407 + MER119 DNA MER1_type 5 501 -82 1949 138 7 10 chr17 7201073 7201363 -78237117 - AluSx SINE Alu -23 289 1 1779 202 104 49 chr17 7201363 7201451 -78237029 + MER119 DNA MER1_type 501 583 0 786 145 0 30 chr17 7201549 7201680 -78236800 + FLAM_C SINE Alu 9 135 -8 1451 186 0 0 chr17 7201682 7201918 -78236562 + AluSq SINE Alu 1 236 -77 2114 127 0 17 chr17 7202449 7202749 -78235731 - AluSg SINE Alu -15 295 1 1073 96 0 0 chr17 7202749 7202885 -78235595 - AluSq/x SINE Alu -176 136 1 711 290 125 8 chr17 7202981 7203229 -78235251 - L2 LINE L2 -4 3268 2992 2164 134 16 0 chr17 7203575 7203882 -78234598 + AluSx SINE Alu 1 312 0 562 298 110 44 chr17 7204468 7204787 -78233693 - L2 LINE L2 -8 3264 2925 40 0 0 0 chr17 7204966 7205006 -78233474 + AT_rich Low_complexity Low_complexity 1 40 0 442 63 48 16 chr17 7205210 7205273 -78233207 + Alu SINE Alu 226 290 -20 213 405 46 6 chr17 7205503 7205676 -78232804 - L2 LINE L2 -905 2409 2230 549 163 163 57 chr17 7205683 7205824 -78232656 - Tigger1 DNA MER2_type 0 2418 2263 2322 89 0 7 chr17 7205827 7206130 -78232350 - AluSx SINE Alu -11 301 1 2226 84 20 0 chr17 7206296 7206595 -78231885 + AluSc SINE Alu 1 305 -4 293 245 70 77 chr17 7208424 7208567 -78229913 + MIR SINE MIR 47 188 -74 182 357 56 8 chr17 7209770 7209896 -78228584 + L2 LINE L2 3137 3268 -4 2064 111 0 26 chr17 7209935 7210241 -78228239 - AluSx SINE Alu -8 304 7 2481 50 0 3 chr17 7211182 7211483 -78226997 + AluY SINE Alu 1 300 -11 1874 146 7 0 chr17 7211491 7211778 -78226702 + AluSq SINE Alu 1 289 -24 310 346 19 43 chr17 7215208 7215462 -78223018 - MIR SINE MIR 0 262 16 1877 97 43 18 chr17 7215500 7215778 -78222702 + AluSg SINE Alu 1 285 -25 26 0 0 0 chr17 7215916 7215942 -78222538 + AT_rich Low_complexity Low_complexity 1 26 0 3398 180 48 24 chr17 7215950 7215997 -78222483 + L1MB7 LINE L1 4456 4500 -1646 2059 112 14 0 chr17 7215997 7216293 -78222187 + AluSp SINE Alu 1 300 -13 3398 180 48 24 chr17 7216293 7217118 -78221362 + L1MB7 LINE L1 4500 5349 -797 2218 105 3 0 chr17 7217120 7217426 -78221054 + AluSp SINE Alu 1 307 -6 1069 45 0 8 chr17 7217428 7217560 -78220920 + AluY SINE Alu 1 131 -180 1941 184 89 49 chr17 7217574 7218050 -78220430 + L1MB7 LINE L1 5338 5793 -391 1509 151 50 14 chr17 7218050 7218328 -78220152 + AluSx SINE Alu 8 295 -17 1704 159 28 14 chr17 7218337 7218627 -78219853 + AluJb SINE Alu 1 294 -18 1941 184 89 49 chr17 7218627 7218656 -78219824 + L1MB7 LINE L1 5800 5753 -431 697 207 0 0 chr17 7218656 7218772 -78219708 + FLAM_C SINE Alu 2 117 -16 1941 184 89 49 chr17 7218772 7218851 -78219629 + L1MB7 LINE L1 5752 5826 -358 2119 93 7 14 chr17 7218969 7219260 -78219220 + AluSx SINE Alu 1 289 -23 2115 127 0 3 chr17 7219811 7220119 -78218361 + AluSq SINE Alu 3 309 -4 1495 64 11 0 chr17 7221010 7221197 -78217283 + AluSp SINE Alu 1 189 -124 2198 96 10 0 chr17 7221630 7221931 -78216549 + AluSp SINE Alu 1 304 -9 672 144 0 18 chr17 7222254 7222365 -78216115 + AluSg/x SINE Alu 190 298 -14 383 276 0 42 chr17 7224462 7224781 -78213699 + (CCCA)n Simple_repeat Simple_repeat 1 305 0 200 324 0 41 chr17 7225178 7225348 -78213132 + (CCCA)n Simple_repeat Simple_repeat 1 163 0 237 307 57 11 chr17 7226026 7226114 -78212366 - L2 LINE L2 -27 3286 3195 268 295 57 16 chr17 7226143 7226265 -78212215 - L1ME4a LINE L1 -28 6093 5967 1977 135 10 3 chr17 7226479 7226783 -78211697 - AluSx SINE Alu -6 306 1 372 186 21 52 chr17 7226785 7226882 -78211598 - L1MDa LINE L1 -4595 1945 1852 325 184 23 46 chr17 7226892 7226979 -78211501 - LTR9 LTR ERV1 -86 526 442 344 281 79 14 chr17 7226992 7227131 -78211349 - L1MDa LINE L1 -4707 1833 1686 248 185 37 0 chr17 7227131 7227185 -78211295 - MLT2B2 LTR ERVL 0 515 460 2230 189 23 63 chr17 7227279 7227754 -78210726 - MLT2B2 LTR ERVL -58 457 2 351 304 41 50 chr17 7227756 7227855 -78210625 - L1MDa LINE L1 -4853 1687 1589 2240 91 0 0 chr17 7227855 7228152 -78210328 - AluY SINE Alu -14 297 1 351 304 41 50 chr17 7228152 7228272 -78210208 - L1MDa LINE L1 -4951 1589 1470 1886 123 13 51 chr17 7228277 7228593 -78209887 - AluSq SINE Alu -9 304 1 192 40 0 0 chr17 7228603 7228628 -78209852 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 2421 60 0 0 chr17 7228657 7228958 -78209522 - AluY SINE Alu -10 301 1 965 227 152 4 chr17 7228961 7229225 -78209255 + MER82 DNA MER2_type 351 653 0 1821 151 14 0 chr17 7229292 7229577 -78208903 - AluJb SINE Alu -23 289 1 1963 129 23 7 chr17 7229584 7229887 -78208593 - AluSc SINE Alu -1 308 1 381 43 0 0 chr17 7229990 7230037 -78208443 + (TA)n Simple_repeat Simple_repeat 1 47 0 1851 124 9 46 chr17 7230037 7230350 -78208130 - AluSx SINE Alu -8 304 2 520 245 86 48 chr17 7230414 7230505 -78207975 - L1M4 LINE L1 -3700 2446 2360 2207 114 0 0 chr17 7230505 7230811 -78207669 - AluSx SINE Alu -6 306 1 520 245 86 48 chr17 7230811 7231033 -78207447 - L1M4 LINE L1 -3786 2360 2121 32 67 0 0 chr17 7231189 7231249 -78207231 + AT_rich Low_complexity Low_complexity 1 60 0 857 226 6 0 chr17 7231268 7231432 -78207048 + AluJb SINE Alu 121 285 -27 21 0 0 0 chr17 7232088 7232109 -78206371 + GC_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr17 7232316 7232337 -78206143 + GC_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr17 7234412 7234440 -78204040 + GC_rich Low_complexity Low_complexity 1 28 0 206 175 0 18 chr17 7234459 7234516 -78203964 + (CCG)n Simple_repeat Simple_repeat 3 58 0 189 0 0 0 chr17 7234949 7234970 -78203510 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 30 27 0 0 chr17 7235959 7235996 -78202484 + GC_rich Low_complexity Low_complexity 1 37 0 237 33 0 0 chr17 7237083 7237113 -78201367 + (CAGA)n Simple_repeat Simple_repeat 3 32 0 203 328 0 0 chr17 7237313 7237377 -78201103 + C-rich Low_complexity Low_complexity 5 68 0 875 143 0 0 chr17 7238451 7238584 -78199896 - AluSq/x SINE Alu -179 133 1 307 285 49 8 chr17 7242361 7242484 -78195996 + MER112 DNA MER1_type 34 161 -99 507 17 0 0 chr17 7242484 7242544 -78195936 + (TG)n Simple_repeat Simple_repeat 1 60 0 559 167 0 53 chr17 7242548 7242662 -78195818 - FLAM_C SINE Alu -34 109 2 297 268 12 0 chr17 7242663 7242745 -78195735 + MER112 DNA MER1_type 166 248 -12 368 348 6 25 chr17 7242750 7242908 -78195572 - MIR3 SINE MIR -39 169 15 29 47 0 0 chr17 7243141 7243184 -78195296 + GC_rich Low_complexity Low_complexity 1 43 0 2190 97 16 3 chr17 7243967 7244275 -78194205 + AluSq SINE Alu 2 313 0 2267 83 3 3 chr17 7244276 7244577 -78193903 + AluSq SINE Alu 1 301 -12 2492 53 0 0 chr17 7245277 7245576 -78192904 - AluY SINE Alu -12 299 1 815 169 0 0 chr17 7245692 7245816 -78192664 + AluJb SINE Alu 162 285 -27 839 145 0 0 chr17 7245820 7245944 -78192536 - FLAM_C SINE Alu -19 124 1 2326 86 3 0 chr17 7246550 7246854 -78191626 - AluSq SINE Alu -8 305 1 2475 49 3 0 chr17 7247801 7248108 -78190372 - AluSx SINE Alu -4 308 1 407 276 32 32 chr17 7248751 7248790 -78189690 + L2 LINE L2 3190 3228 -85 2376 65 3 0 chr17 7248790 7249084 -78189396 + AluSp SINE Alu 1 295 -18 407 276 32 32 chr17 7249084 7249167 -78189313 + L2 LINE L2 3227 3312 -1 788 186 0 0 chr17 7249210 7249339 -78189141 + FLAM_C SINE Alu 2 130 -3 321 282 64 9 chr17 7249536 7249646 -78188834 + MIR SINE MIR 96 211 -51 2104 102 0 0 chr17 7249724 7250009 -78188471 - AluSg SINE Alu -9 301 17 850 142 0 0 chr17 7250112 7250232 -78188248 - FLAM_C SINE Alu -23 120 1 2203 103 7 0 chr17 7250261 7250562 -78187918 + AluSq SINE Alu 3 305 -8 247 303 63 42 chr17 7250565 7250707 -78187773 + MER102b DNA MER1_type 169 313 -28 210 200 20 0 chr17 7251746 7251796 -78186684 + (TA)n Simple_repeat Simple_repeat 1 51 0 369 141 0 0 chr17 7254774 7254845 -78183635 + (TCC)n Simple_repeat Simple_repeat 2 72 0 740 83 28 0 chr17 7256098 7256206 -78182274 + AluSg/x SINE Alu 198 308 -1 2289 85 0 29 chr17 7256309 7256625 -78181855 + AluSx SINE Alu 1 307 -5 2557 50 0 0 chr17 7256629 7256931 -78181549 + AluY SINE Alu 2 303 -8 2053 97 13 32 chr17 7256932 7257243 -78181237 + AluSg SINE Alu 2 306 -4 615 152 20 0 chr17 7257243 7257342 -78181138 - AluJo/FLAM SINE Alu -187 125 25 432 161 0 0 chr17 7258221 7258302 -78180178 + GA-rich Low_complexity Low_complexity 3 83 0 2224 77 0 26 chr17 7259841 7260151 -78178329 + AluSq SINE Alu 1 302 -11 817 111 8 0 chr17 7260921 7261038 -78177442 - AluSg/x SINE Alu -13 299 182 1817 125 22 47 chr17 7261570 7261889 -78176591 + AluSx SINE Alu 1 311 -1 2182 103 3 0 chr17 7261891 7262192 -78176288 + AluSc SINE Alu 1 302 -7 2044 143 0 0 chr17 7262204 7262498 -78175982 + AluJo SINE Alu 1 294 -18 2159 109 0 7 chr17 7262500 7262802 -78175678 + AluSq SINE Alu 1 300 -13 439 353 0 0 chr17 7262806 7262928 -78175552 - MIR SINE MIR -136 126 5 322 331 190 0 chr17 7262981 7263123 -78175357 - MER91A DNA MER1_type -22 174 6 1271 152 0 14 chr17 7263279 7263489 -78174991 - AluJo SINE Alu -19 293 87 198 329 0 14 chr17 7263492 7263565 -78174915 - MIR SINE MIR -21 241 170 657 197 16 8 chr17 7263749 7263871 -78174609 + MIR SINE MIR 76 198 -64 425 295 98 6 chr17 7264095 7264278 -78174202 + L2 LINE L2 2942 3141 -172 2320 81 0 0 chr17 7264279 7264577 -78173903 - AluSg SINE Alu -12 298 1 926 135 0 14 chr17 7264578 7264719 -78173761 - AluSq/x SINE Alu -173 139 1 1840 166 3 10 chr17 7264720 7265033 -78173447 - AluJb SINE Alu -1 311 1 2055 78 0 32 chr17 7265040 7265200 -78173280 - AluSx SINE Alu -15 297 148 2413 56 0 10 chr17 7265200 7265503 -78172977 - AluY SINE Alu -11 300 1 2055 78 0 32 chr17 7265503 7265626 -78172854 - AluSx SINE Alu -164 148 23 1713 179 0 10 chr17 7265637 7265938 -78172542 - AluJb SINE Alu -14 298 1 2068 115 0 38 chr17 7265993 7266307 -78172173 - AluSx SINE Alu -8 304 3 1782 167 3 10 chr17 7266309 7266609 -78171871 - AluJb SINE Alu -14 298 1 332 241 0 80 chr17 7266610 7266722 -78171758 + L2 LINE L2 3210 3312 -1 821 93 0 0 chr17 7266821 7266928 -78171552 + AluSq/x SINE Alu 1 107 -205 430 341 0 0 chr17 7268967 7269143 -78169337 + (CTGGGG)n Simple_repeat Simple_repeat 3 178 0 214 278 17 17 chr17 7269183 7269298 -78169182 + (CTGGGG)n Simple_repeat Simple_repeat 1 115 0 356 309 6 23 chr17 7269318 7269493 -78168987 + (CTGGGG)n Simple_repeat Simple_repeat 2 173 0 1857 100 55 52 chr17 7270817 7271023 -78167457 - AluSx SINE Alu -1 311 102 2321 89 0 7 chr17 7271023 7271327 -78167153 - AluY SINE Alu -9 302 1 1857 100 55 52 chr17 7271327 7271430 -78167050 - AluSx SINE Alu -210 102 1 237 178 0 0 chr17 7273012 7273057 -78165423 + (CGG)n Simple_repeat Simple_repeat 3 47 0 2012 123 18 0 chr17 7274517 7274802 -78163678 + AluSx SINE Alu 1 290 -22 609 14 0 0 chr17 7274803 7274873 -78163607 + (GGAA)n Simple_repeat Simple_repeat 3 72 0 1781 110 88 0 chr17 7274877 7275175 -78163305 + AluSx SINE Alu 2 323 0 298 325 16 16 chr17 7275735 7275858 -78162622 + MIR SINE MIR 73 195 -67 2430 71 0 19 chr17 7275880 7276191 -78162289 - AluY SINE Alu -6 305 1 2039 78 13 49 chr17 7276191 7276498 -78161982 - AluY SINE Alu -15 296 1 971 155 25 6 chr17 7276782 7276943 -78161537 + AluJb SINE Alu 120 283 -29 1336 160 53 97 chr17 7276963 7277100 -78161380 + AluJo SINE Alu 3 144 -168 1983 129 0 7 chr17 7277100 7277394 -78161086 + AluSx SINE Alu 5 296 -16 1336 160 53 97 chr17 7277394 7277426 -78161054 + AluJo SINE Alu 144 176 -136 180 0 0 0 chr17 7277426 7277446 -78161034 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1336 160 53 97 chr17 7277446 7277594 -78160886 + AluJo SINE Alu 176 307 -5 224 208 21 0 chr17 7281170 7281218 -78157262 + G-rich Low_complexity Low_complexity 1 49 0 250 289 0 10 chr17 7281632 7281736 -78156744 + G-rich Low_complexity Low_complexity 3 105 0 290 287 22 39 chr17 7282556 7282737 -78155743 + (CAGA)n Simple_repeat Simple_repeat 3 180 0 * 307 279 12 43 chr17 7282688 7282849 -78155631 + (CAGAGA)n Simple_repeat Simple_repeat 4 159 0 244 273 45 0 chr17 7283117 7283183 -78155297 + L2 LINE L2 3210 3278 -35 328 159 16 0 chr17 7285469 7285532 -78152948 - MER61-int LTR ERV1 -239 4978 4915 2006 99 64 3 chr17 7285532 7285814 -78152666 + AluSx SINE Alu 1 299 -13 1892 97 44 69 chr17 7285817 7286136 -78152344 + AluSq SINE Alu 3 313 0 6060 110 7 8 chr17 7286138 7287092 -78151388 - MER61-int LTR ERV1 -631 4586 3634 1973 114 61 7 chr17 7287100 7287397 -78151083 - AluSp SINE Alu 0 313 1 320 176 0 14 chr17 7287402 7287476 -78151004 + C-rich Low_complexity Low_complexity 1 73 0 1921 136 0 4 chr17 7287485 7287765 -78150715 - AluSx SINE Alu -33 279 1 5706 96 6 22 chr17 7287765 7288394 -78150086 - MER61-int LTR ERV1 -1586 3631 3018 2424 58 0 0 chr17 7288394 7288689 -78149791 - AluY SINE Alu -16 295 1 5706 96 6 22 chr17 7288689 7288966 -78149514 - MER61-int LTR ERV1 -2199 3018 2738 2899 55 3 31 chr17 7288966 7289081 -78149399 - L1PA8 LINE L1 -2 6170 6053 2066 101 7 7 chr17 7289081 7289096 -78149384 - AluSp SINE Alu -17 296 282 270 0 0 0 chr17 7289096 7289126 -78149354 + (TG)n Simple_repeat Simple_repeat 1 30 0 198 0 0 0 chr17 7289125 7289147 -78149333 + (GA)n Simple_repeat Simple_repeat 1 22 0 * 2066 101 7 7 chr17 7289126 7289427 -78149053 - AluSp SINE Alu -30 283 1 2899 55 3 31 chr17 7289427 7289692 -78148788 - L1PA8 LINE L1 -119 6053 5801 581 297 110 78 chr17 7340499 7340843 -78097637 + L2 LINE L2 1598 1929 -1385 2337 103 0 0 chr17 7340843 7341145 -78097335 - AluSx SINE Alu -9 303 2 581 297 110 78 chr17 7341145 7341671 -78096809 + L2 LINE L2 1929 2496 -818 755 212 29 0 chr17 7341782 7341952 -78096528 - Charlie8 DNA MER1_type -2157 260 86 2646 40 0 0 chr17 7342087 7342383 -78096097 - AluY SINE Alu -15 296 1 332 280 89 78 chr17 7342415 7342616 -78095864 + L1M4 LINE L1 4214 4420 -1726 315 0 0 0 chr17 7342616 7342651 -78095829 + (TG)n Simple_repeat Simple_repeat 2 36 0 332 280 89 78 chr17 7342651 7342706 -78095774 + L1M4 LINE L1 4420 4473 -1673 808 203 7 13 chr17 7342706 7342859 -78095621 + AluJb SINE Alu 134 285 -27 267 31 0 0 chr17 7342859 7342891 -78095589 + (CA)n Simple_repeat Simple_repeat 2 33 0 782 293 150 49 chr17 7342899 7343387 -78095093 + L1M4 LINE L1 4519 5055 -1091 29 0 0 0 chr17 7343387 7343416 -78095064 + AT_rich Low_complexity Low_complexity 1 29 0 595 156 0 2 chr17 7343419 7343695 -78094785 + AluSx SINE Alu 1 325 0 252 221 15 0 chr17 7344132 7344200 -78094280 + HAL1 LINE L1 840 908 -1599 837 204 171 24 chr17 7344214 7344548 -78093932 + HAL1 LINE L1 1581 1963 -544 538 133 7 156 chr17 7344629 7344764 -78093716 + AluSq/x SINE Alu 2 116 -196 207 100 0 0 chr17 7344765 7344795 -78093685 + (TAA)n Simple_repeat Simple_repeat 2 31 0 2324 88 0 7 chr17 7344802 7345097 -78093383 - AluSg SINE Alu -17 293 1 400 290 49 11 chr17 7345098 7345281 -78093199 + HAL1 LINE L1 2029 2218 -289 2533 83 3 0 chr17 7345473 7345785 -78092695 - AluSp SINE Alu 0 313 1 1907 158 3 3 chr17 7346016 7346319 -78092161 + AluJb SINE Alu 1 303 -9 352 242 25 50 chr17 7347381 7347542 -78090938 + L1MC4a LINE L1 5734 5890 -1918 709 112 103 26 chr17 7347547 7347663 -78090817 + FLAM_C SINE Alu 5 129 -4 2551 79 0 0 chr17 7347798 7348102 -78090378 - AluSq SINE Alu -4 309 6 337 272 97 61 chr17 7348800 7348914 -78089566 - MIR SINE MIR -122 140 23 1861 125 96 0 chr17 7348992 7349272 -78089208 - AluJo SINE Alu 0 312 6 1107 80 12 19 chr17 7349286 7349448 -78089032 - L1PA13 LINE L1 0 6163 6003 2387 99 0 0 chr17 7349517 7349819 -78088661 + AluSx SINE Alu 1 302 -10 1845 77 0 0 chr17 7350493 7350714 -78087766 - AluSg/x SINE Alu -5 307 87 348 221 77 10 chr17 7350831 7350935 -78087545 + L2 LINE L2 3199 3309 -4 2103 124 7 0 chr17 7351130 7351428 -78087052 - AluJb SINE Alu -12 300 1 2180 132 0 3 chr17 7352361 7352664 -78085816 - AluSx SINE Alu -10 302 1 2441 85 7 0 chr17 7352849 7353155 -78085325 + AluSp SINE Alu 1 308 -5 2456 70 0 3 chr17 7353155 7353606 -78084874 + AluY SINE Alu 1 451 0 804 292 29 0 chr17 7354484 7354693 -78083787 - MIR SINE MIR -20 242 28 2384 79 0 0 chr17 7355384 7355688 -78082792 - AluSx SINE Alu -8 304 1 2293 76 0 19 chr17 7356183 7356500 -78081980 + AluY SINE Alu 1 311 0 2238 109 0 0 chr17 7357809 7358112 -78080368 - AluSq SINE Alu -10 303 1 792 125 117 0 chr17 7358639 7358759 -78079721 + AluJo SINE Alu 3 136 -176 2318 86 0 0 chr17 7358759 7359063 -78079417 + AluSx SINE Alu 1 304 -8 1903 139 36 3 chr17 7359073 7359375 -78079105 + AluJb SINE Alu 1 312 0 2235 94 3 22 chr17 7359382 7359700 -78078780 + AluSx SINE Alu 1 312 0 2351 90 0 3 chr17 7361035 7361345 -78077135 + AluSg SINE Alu 1 309 -1 418 226 59 0 chr17 7361926 7362028 -78076452 + L2 LINE L2 3205 3312 -1 2297 105 0 0 chr17 7362353 7362659 -78075821 - AluSx SINE Alu -6 306 1 2393 93 0 0 chr17 7362755 7363065 -78075415 - AluSp SINE Alu -3 310 1 1067 218 102 18 chr17 7363099 7363540 -78074940 - HAL1b LINE L1 0 1348 871 312 265 147 0 chr17 7363535 7363637 -78074843 - L1MC4 LINE L1 -359 7683 7567 * 2147 113 0 10 chr17 7363637 7363650 -78074830 - AluSx SINE Alu -5 307 295 257 0 30 0 chr17 7363650 7363683 -78074797 + (TTTAA)n Simple_repeat Simple_repeat 2 35 0 2147 113 0 10 chr17 7363683 7363979 -78074501 - AluSx SINE Alu -17 295 1 780 83 0 50 chr17 7363984 7364104 -78074376 - AluSg/x SINE Alu -9 300 187 433 256 7 29 chr17 7364104 7364241 -78074239 - L1MC4 LINE L1 -465 7577 7444 273 251 161 35 chr17 7364287 7364486 -78073994 - HAL1b LINE L1 -1055 293 70 2180 85 3 0 chr17 7365082 7365385 -78073095 + AluSp SINE Alu 1 304 0 741 177 0 8 chr17 7365405 7365535 -78072945 - FLAM_A SINE Alu -1 141 13 2110 124 0 0 chr17 7365798 7366097 -78072383 - AluJb SINE Alu -1 311 13 345 361 50 41 chr17 7366123 7366342 -78072138 - L1M4 LINE L1 -1593 4553 4333 334 209 77 11 chr17 7366373 7366464 -78072016 - U6 snRNA snRNA -9 98 2 326 278 40 48 chr17 7366492 7366618 -78071862 - L1MC4 LINE L1 0 8042 7918 347 330 86 40 chr17 7366804 7367030 -78071450 + L2 LINE L2 2934 3179 -93 2345 81 0 13 chr17 7367030 7367340 -78071140 - AluSc SINE Alu -3 306 1 347 330 86 40 chr17 7367340 7367416 -78071064 + L2 LINE L2 3179 3250 -22 225 0 0 0 chr17 7367884 7367909 -78070571 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 2210 98 3 0 chr17 7368209 7368504 -78069976 + AluSx SINE Alu 1 296 -16 2092 109 0 0 chr17 7368506 7368817 -78069663 + AluSx SINE Alu 1 311 0 338 329 72 83 chr17 7368886 7369063 -78069417 + L1ME4a LINE L1 5640 5817 -304 2040 97 0 58 chr17 7369063 7369371 -78069109 + AluSg SINE Alu 1 290 -20 338 329 72 83 chr17 7369371 7369422 -78069058 + L1ME4a LINE L1 5817 5867 -254 2153 117 0 0 chr17 7369422 7369730 -78068750 + AluSx SINE Alu 1 308 -4 338 329 72 83 chr17 7369730 7369769 -78068711 + L1ME4a LINE L1 5867 5905 -216 2009 140 0 3 chr17 7369769 7370069 -78068411 + AluSx SINE Alu 1 299 -13 338 329 72 83 chr17 7370069 7370155 -78068325 + L1ME4a LINE L1 5905 5990 -131 2092 101 9 25 chr17 7370155 7370473 -78068007 - AluSq SINE Alu 0 313 1 338 329 72 83 chr17 7370473 7370587 -78067893 + L1ME4a LINE L1 5990 6105 -16 2206 106 3 0 chr17 7371240 7371543 -78066937 + AluSx SINE Alu 1 304 -8 2385 77 0 6 chr17 7371543 7371855 -78066625 + AluY SINE Alu 1 311 0 1690 210 75 5 chr17 7371874 7372274 -78066206 + L1MB5 LINE L1 5593 6020 -154 697 169 54 0 chr17 7372349 7372497 -78065983 + L1MB7 LINE L1 6029 6184 0 2054 110 3 23 chr17 7372507 7372817 -78065663 + AluSx SINE Alu 1 304 -8 2303 90 0 0 chr17 7373338 7373639 -78064841 + AluSx SINE Alu 1 301 -11 1153 142 0 0 chr17 7373639 7373815 -78064665 + AluSg/x SINE Alu 137 312 0 2257 102 0 3 chr17 7375383 7375686 -78062794 + AluSx SINE Alu 1 302 -10 222 347 7 20 chr17 7376823 7376970 -78061510 + C-rich Low_complexity Low_complexity 2 146 0 24 0 0 0 chr17 7377577 7377601 -78060879 + GC_rich Low_complexity Low_complexity 1 24 0 1762 89 155 4 chr17 7380321 7380592 -78057888 + AluSx SINE Alu 1 312 0 372 43 0 0 chr17 7380645 7380691 -78057789 + (CA)n Simple_repeat Simple_repeat 2 47 0 691 299 115 20 chr17 7381123 7381307 -78057173 + L2 LINE L2 2884 3049 -264 2021 94 0 14 chr17 7381307 7381630 -78056850 + AluSx SINE Alu 1 319 0 691 299 115 20 chr17 7381630 7381836 -78056644 + L2 LINE L2 3049 3312 -1 21 0 0 0 chr17 7383452 7383473 -78055007 + AT_rich Low_complexity Low_complexity 1 21 0 385 225 45 36 chr17 7388063 7388174 -78050306 - MIR SINE MIR -131 131 20 22 56 0 0 chr17 7389758 7389794 -78048686 + GC_rich Low_complexity Low_complexity 1 36 0 486 288 0 34 chr17 7390056 7390237 -78048243 - MIR3 SINE MIR -55 153 14 190 269 30 0 chr17 7392825 7392892 -78045588 + MIR SINE MIR 76 144 -118 1133 60 0 0 chr17 7393407 7393541 -78044939 + AluSx SINE Alu 1 134 -179 1969 129 14 0 chr17 7393543 7393837 -78044643 + AluSx SINE Alu 1 298 -14 1038 98 0 75 chr17 7394275 7394449 -78044031 - AluSx SINE Alu -151 161 1 1122 154 0 0 chr17 7394586 7394774 -78043706 + AluSx SINE Alu 124 311 -1 1826 148 20 3 chr17 7394779 7395083 -78043397 + AluJb SINE Alu 1 309 -3 796 66 0 16 chr17 7395272 7395394 -78043086 + (TA)n Simple_repeat Simple_repeat 2 121 0 795 315 89 40 chr17 7395932 7396000 -78042480 + L2 LINE L2 2826 2889 -424 2007 131 3 0 chr17 7396000 7396328 -78042152 - AluSx SINE Alu 0 329 1 1882 152 0 0 chr17 7396330 7396626 -78041854 - AluSx SINE Alu -16 296 1 795 315 89 40 chr17 7396626 7397001 -78041479 + L2 LINE L2 2889 3295 -18 2089 129 0 0 chr17 7397007 7397309 -78041171 + AluSx SINE Alu 1 302 -10 494 263 141 57 chr17 7399131 7399428 -78039052 - L2 LINE L2 -2 3311 2990 2696 211 99 40 chr17 7401289 7401519 -78036961 - L1ME2 LINE L1 0 6164 5949 2051 71 43 4 chr17 7401519 7401799 -78036681 + AluSq SINE Alu 1 291 -22 2696 211 99 40 chr17 7401799 7402791 -78035689 - L1ME2 LINE L1 -215 5949 4873 1663 161 37 3 chr17 7402841 7403139 -78035341 - AluJo SINE Alu -4 308 1 1417 224 56 105 chr17 7403185 7403245 -78035235 + L1M4 LINE L1 3554 3615 -2531 2114 130 3 0 chr17 7403245 7403552 -78034928 + AluSx SINE Alu 1 308 -4 1417 224 56 105 chr17 7403552 7403724 -78034756 + L1M4 LINE L1 3615 3794 -2352 2191 109 0 13 chr17 7403724 7403860 -78034620 + AluSx SINE Alu 1 137 -175 2241 79 14 0 chr17 7403860 7404151 -78034329 + AluSg SINE Alu 1 295 -15 2191 109 0 13 chr17 7404151 7404326 -78034154 + AluSx SINE Alu 137 308 -4 1417 224 56 105 chr17 7404326 7404385 -78034095 + L1M4 LINE L1 3794 3854 -2292 748 162 8 0 chr17 7404385 7404502 -78033978 + FLAM_C SINE Alu 1 118 -15 1417 224 56 105 chr17 7404502 7404742 -78033738 + L1M4 LINE L1 3854 4104 -2042 2385 60 6 19 chr17 7404742 7405056 -78033424 + AluY SINE Alu 2 311 0 1417 224 56 105 chr17 7405056 7405163 -78033317 + L1M4 LINE L1 4104 4215 -1931 2470 62 0 0 chr17 7405163 7405470 -78033010 + AluY SINE Alu 1 307 -4 1931 124 0 46 chr17 7405478 7405620 -78032860 + AluSq SINE Alu 6 153 -160 2360 74 0 3 chr17 7405620 7405917 -78032563 + AluSq SINE Alu 1 296 -17 1931 124 0 46 chr17 7405917 7406097 -78032383 + AluSq SINE Alu 153 313 0 1417 224 56 105 chr17 7406097 7406169 -78032311 + L1M4 LINE L1 4222 4296 -1850 1796 105 52 8 chr17 7406169 7406435 -78032045 + AluSq SINE Alu 1 278 -35 2100 102 12 46 chr17 7406435 7406758 -78031722 + AluSx SINE Alu 1 312 0 1417 224 56 105 chr17 7406436 7406836 -78031644 + L1M4 LINE L1 4296 4313 -1833 928 171 22 75 chr17 7406836 7407064 -78031416 + MER2 DNA MER2_type 2 217 -128 230 241 35 0 chr17 7407558 7407616 -78030864 - MIR SINE MIR -3 259 200 1927 124 14 3 chr17 7407643 7407977 -78030503 + AluSq SINE Alu 1 313 0 2355 73 13 0 chr17 7408039 7408340 -78030140 + AluSp SINE Alu 1 305 -8 1070 147 47 21 chr17 7408453 7408502 -78029978 + AluJo SINE Alu 88 134 -174 2165 114 0 16 chr17 7408502 7408819 -78029661 + AluSx SINE Alu 1 312 0 1070 147 47 21 chr17 7408819 7408985 -78029495 + AluJo SINE Alu 134 308 0 2107 112 6 3 chr17 7408992 7409304 -78029176 + AluSq SINE Alu 1 313 0 354 242 96 45 chr17 7409451 7409649 -78028831 - L2 LINE L2 -17 3296 3089 2108 118 3 0 chr17 7410020 7410317 -78028163 + AluSx SINE Alu 1 298 -14 210 285 134 45 chr17 7410318 7410497 -78027983 - L2 LINE L2 -1810 1504 1310 1941 146 0 13 chr17 7411558 7411867 -78026613 + AluJb SINE Alu 1 305 -7 218 280 21 54 chr17 7412489 7412582 -78025898 - MIR SINE MIR -70 192 103 2296 60 7 13 chr17 7412596 7412895 -78025585 + AluY SINE Alu 1 297 -14 844 112 0 0 chr17 7413986 7414111 -78024369 - MER47A DNA MER2_type 0 366 242 2165 82 0 51 chr17 7414111 7414427 -78024053 - AluSg SINE Alu -10 300 1 1121 179 28 14 chr17 7414439 7414657 -78023823 - AluJo SINE Alu -11 301 81 868 163 0 25 chr17 7414665 7414825 -78023655 - AluJb SINE Alu -24 288 133 236 53 26 0 chr17 7414825 7414863 -78023617 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 2234 78 0 0 chr17 7414863 7415146 -78023334 - AluSg SINE Alu -27 283 1 1522 192 31 3 chr17 7415148 7415440 -78023040 - AluJo SINE Alu -12 300 1 923 116 0 26 chr17 7415440 7415595 -78022885 - MER47A DNA MER2_type -116 250 100 2271 80 7 0 chr17 7415656 7415955 -78022525 + AluSx SINE Alu 1 301 -11 735 176 0 24 chr17 7415958 7416083 -78022397 + FLAM_A SINE Alu 5 126 -7 2019 138 0 0 chr17 7416084 7416382 -78022098 + AluSx SINE Alu 1 298 -14 521 217 0 19 chr17 7416397 7416503 -78021977 - MER47A DNA MER2_type -259 107 4 2147 80 23 13 chr17 7417058 7417360 -78021120 + AluSp SINE Alu 1 305 -8 246 320 58 10 chr17 7418011 7418114 -78020366 + MIR SINE MIR 110 217 -45 1853 159 10 0 chr17 7418399 7418708 -78019772 - AluJb SINE Alu 0 312 1 25 0 0 0 chr17 7419982 7420007 -78018473 + AT_rich Low_complexity Low_complexity 1 25 0 810 213 23 74 chr17 7420007 7420223 -78018257 - L1MA9 LINE L1 -2 6310 6106 2119 113 3 0 chr17 7420386 7420688 -78017792 + AluSq SINE Alu 1 303 -10 238 258 118 21 chr17 7420794 7420887 -78017593 - L2 LINE L2 -3 3310 3209 1208 113 0 6 chr17 7421023 7421200 -78017280 + AluSg/x SINE Alu 137 312 0 537 134 0 72 chr17 7421341 7421438 -78017042 + AluJo/FLAM SINE Alu 22 111 -201 2428 75 0 0 chr17 7421439 7421746 -78016734 - AluY SINE Alu -4 307 1 36 77 0 0 chr17 7421761 7421839 -78016641 + AT_rich Low_complexity Low_complexity 1 78 0 1988 101 61 7 chr17 7421855 7422151 -78016329 - AluSx SINE Alu 0 312 1 324 272 57 57 chr17 7422151 7422309 -78016171 + L1M4 LINE L1 3820 3977 -2169 1938 122 7 7 chr17 7422378 7422673 -78015807 + AluSx SINE Alu 1 295 -17 703 241 41 20 chr17 7422673 7422773 -78015707 + AluJo SINE Alu 11 107 -205 921 16 24 0 chr17 7422773 7422896 -78015584 + (TAGA)n Simple_repeat Simple_repeat 1 126 0 2142 100 0 7 chr17 7422900 7423200 -78015280 + AluSc SINE Alu 1 298 -11 703 241 41 20 chr17 7423200 7423289 -78015191 + AluJo SINE Alu 109 209 -103 24 22 0 43 chr17 7423317 7423338 -78015142 + AT_rich Low_complexity Low_complexity 1 21 -23 2103 99 7 0 chr17 7423338 7423632 -78014848 + AluSg SINE Alu 1 296 -14 24 22 0 43 chr17 7423632 7423656 -78014824 + AT_rich Low_complexity Low_complexity 21 44 0 1999 123 0 3 chr17 7423681 7423997 -78014483 - AluSg SINE Alu 0 310 1 244 0 27 27 chr17 7424087 7424124 -78014356 + (TTATA)n Simple_repeat Simple_repeat 5 41 0 544 292 92 71 chr17 7424158 7424332 -78014148 + L1M4 LINE L1 4217 4386 -1760 2011 144 7 0 chr17 7424332 7424637 -78013843 + AluSx SINE Alu 1 307 -5 544 292 92 71 chr17 7424637 7424910 -78013570 + L1M4 LINE L1 4386 4673 -1473 2030 100 4 4 chr17 7424947 7425226 -78013254 + AluSc SINE Alu 1 279 -30 1728 108 8 4 chr17 7425239 7425498 -78012982 + AluSx SINE Alu 44 303 -9 1937 145 0 3 chr17 7425505 7425816 -78012664 + AluSx SINE Alu 1 310 -2 23 54 0 0 chr17 7425817 7425854 -78012626 + AT_rich Low_complexity Low_complexity 1 37 0 2102 107 13 13 chr17 7425919 7426229 -78012251 + AluSq SINE Alu 4 313 0 2308 102 0 9 chr17 7426416 7426731 -78011749 - AluSp SINE Alu -1 312 1 2001 142 0 3 chr17 7426735 7427044 -78011436 - AluSx SINE Alu -4 308 1 1992 147 0 0 chr17 7427152 7427451 -78011029 + AluSx SINE Alu 1 299 -13 2068 132 0 0 chr17 7427523 7427833 -78010647 + AluSx SINE Alu 1 310 -2 2160 105 10 3 chr17 7428231 7428535 -78009945 - AluSq SINE Alu -7 306 1 2241 75 3 23 chr17 7428581 7428886 -78009594 - AluSq SINE Alu -14 299 1 295 341 117 40 chr17 7428975 7429248 -78009232 + L2 LINE L2 3003 3296 -17 22 0 0 0 chr17 7429495 7429517 -78008963 + AT_rich Low_complexity Low_complexity 1 22 0 219 36 0 0 chr17 7429847 7429875 -78008605 + (TTTTTG)n Simple_repeat Simple_repeat 3 30 0 2120 77 0 74 chr17 7430275 7430601 -78007879 + AluSp SINE Alu 1 302 -11 204 208 0 0 chr17 7430975 7431023 -78007457 + (TGGG)n Simple_repeat Simple_repeat 1 48 0 212 162 0 0 chr17 7431863 7431900 -78006580 + (TG)n Simple_repeat Simple_repeat 2 38 0 751 111 19 0 chr17 7432708 7432816 -78005664 + FLAM_A SINE Alu 22 131 -11 314 231 108 39 chr17 7437110 7437240 -78001240 - L2 LINE L2 -10 3262 3124 2167 105 0 13 chr17 7437264 7437398 -78001082 + AluSg SINE Alu 1 135 -175 2295 56 13 20 chr17 7437398 7437701 -78000779 + AluY SINE Alu 1 301 -10 2167 105 0 13 chr17 7437701 7437872 -78000608 + AluSg SINE Alu 135 302 -8 1909 101 10 68 chr17 7437882 7438190 -78000290 + AluSq SINE Alu 1 290 -23 198 0 0 0 chr17 7438200 7438222 -78000258 + (TGAA)n Simple_repeat Simple_repeat 1 22 0 478 395 47 13 chr17 7438252 7438551 -77999929 - L2 LINE L2 -345 2969 2661 656 189 20 59 chr17 7438551 7438659 -77999821 - MER45 DNA AcHobo 0 1581 1479 1928 126 40 3 chr17 7438659 7438960 -77999520 - AluSx SINE Alu 0 312 1 656 189 20 59 chr17 7438960 7439004 -77999476 - MER45 DNA AcHobo -102 1479 1435 1875 143 0 27 chr17 7439004 7439305 -77999175 - AluSx SINE Alu -18 294 2 325 222 37 37 chr17 7439314 7439395 -77999085 - AluJ SINE Alu -102 200 120 2404 70 0 0 chr17 7439419 7439717 -77998763 - AluSg SINE Alu -12 298 1 643 140 28 9 chr17 7439760 7439867 -77998613 - AluJ SINE Alu -195 117 9 1347 199 41 8 chr17 7439867 7440133 -77998347 - MER45B DNA AcHobo -425 615 341 1018 143 82 152 chr17 7440133 7440448 -77998032 - AluJo SINE Alu -7 305 13 1158 211 97 100 chr17 7440519 7440870 -77997610 - MER45B DNA AcHobo -690 350 1 2064 134 3 0 chr17 7441030 7441328 -77997152 - AluSx SINE Alu -13 299 1 238 272 247 19 chr17 7441384 7441450 -77997030 - L2 LINE L2 -93 3220 3170 1917 128 11 0 chr17 7441450 7441774 -77996706 - AluSx SINE Alu 0 327 1 238 272 247 19 chr17 7441774 7441864 -77996616 - L2 LINE L2 -143 3170 3027 2019 120 13 0 chr17 7441864 7442164 -77996316 - AluSx SINE Alu -8 304 1 499 184 23 0 chr17 7442169 7442256 -77996224 - FRAM SINE Alu -17 159 71 1096 149 80 0 chr17 7442578 7442766 -77995714 + AluSx SINE Alu 1 203 -109 520 82 27 0 chr17 7442766 7442839 -77995641 + AluSq/x SINE Alu 69 143 -170 1782 117 68 7 chr17 7442839 7443120 -77995360 + AluSg SINE Alu 1 298 -12 2246 88 3 0 chr17 7443120 7443414 -77995066 + AluSp SINE Alu 1 297 -16 2051 65 79 0 chr17 7443415 7443692 -77994788 + AluY SINE Alu 1 299 -12 1877 96 40 63 chr17 7443695 7443786 -77994694 + AluSx SINE Alu 1 93 -219 2290 81 7 0 chr17 7443786 7444095 -77994385 + AluSp SINE Alu 2 312 -1 1877 96 40 63 chr17 7444095 7444305 -77994175 + AluSx SINE Alu 93 295 -17 7059 110 177 90 chr17 7444981 7446541 -77991939 - pTR5 LTR ERV1 0 2438 743 866 139 0 13 chr17 7446674 7446832 -77991648 + L1MB3 LINE L1 5987 6142 -41 893 112 0 0 chr17 7446833 7446958 -77991522 + AluSg/x SINE Alu 173 297 -13 633 128 128 9 chr17 7446970 7447079 -77991401 + AluJb SINE Alu 3 124 -188 365 109 0 47 chr17 7447079 7447091 -77991389 + L1MB2 LINE L1 6111 6122 -49 1866 164 0 10 chr17 7447091 7447226 -77991254 + AluSx SINE Alu 1 136 -176 2069 77 60 0 chr17 7447226 7447511 -77990969 + AluSx SINE Alu 1 302 -10 1866 164 0 10 chr17 7447511 7447674 -77990806 + AluSx SINE Alu 136 296 -16 365 109 0 47 chr17 7447674 7447725 -77990755 + L1MB2 LINE L1 6122 6171 0 901 193 0 23 chr17 7447768 7447944 -77990536 + AluJo SINE Alu 1 172 -140 212 169 34 51 chr17 7447991 7448026 -77990454 + A-rich Low_complexity Low_complexity 2 36 -23 2077 127 3 3 chr17 7448026 7448325 -77990155 + AluSx SINE Alu 1 299 -13 2216 116 0 0 chr17 7448325 7448635 -77989845 + AluY SINE Alu 1 310 -1 212 169 34 51 chr17 7448635 7448657 -77989823 + A-rich Low_complexity Low_complexity 34 59 0 445 282 65 24 chr17 7448914 7449084 -77989396 - MIR SINE MIR -12 250 74 2095 128 0 3 chr17 7449090 7449403 -77989077 - AluSx SINE Alu 0 312 1 2226 116 0 0 chr17 7449517 7449819 -77988661 + AluSx SINE Alu 1 302 -10 2154 122 0 0 chr17 7449819 7450115 -77988365 + AluSx SINE Alu 1 296 -16 2304 78 0 0 chr17 7450115 7450411 -77988069 + AluY SINE Alu 1 296 -15 457 272 117 31 chr17 7450965 7451222 -77987258 + L2 LINE L2 2951 3229 -84 1402 61 4 2 chr17 7451224 7451488 -77986992 - AluY SINE Alu 0 311 2 335 243 0 0 chr17 7451488 7451558 -77986922 + L2 LINE L2 3179 3248 -24 2203 98 0 10 chr17 7451939 7452259 -77986221 - AluSx SINE Alu 0 312 1 2321 69 0 10 chr17 7452966 7453272 -77985208 + AluSq SINE Alu 1 303 -10 513 308 68 43 chr17 7453276 7453338 -77985142 + L2 LINE L2 3028 3087 -226 2447 64 0 3 chr17 7453338 7453650 -77984830 - AluY SINE Alu 0 311 1 513 308 68 43 chr17 7453650 7453866 -77984614 + L2 LINE L2 3087 3313 0 1566 164 27 7 chr17 7454793 7455091 -77983389 - AluJo SINE Alu -8 304 1 241 287 37 28 chr17 7456197 7456305 -77982175 + MIR SINE MIR 99 207 -55 195 129 0 0 chr17 7457019 7457050 -77981430 + (CAG)n Simple_repeat Simple_repeat 3 33 0 531 213 66 29 chr17 7457511 7457647 -77980833 + MIR SINE MIR 74 214 -48 369 0 0 0 chr17 7457839 7457880 -77980600 + (TTTTA)n Simple_repeat Simple_repeat 1 41 0 1747 140 0 18 chr17 7457880 7458165 -77980315 - AluSx SINE Alu -32 280 1 2242 100 0 0 chr17 7458177 7458478 -77980002 - AluSq SINE Alu -8 305 5 992 136 0 30 chr17 7458495 7458510 -77979970 + AluSg/x SINE Alu 122 136 -180 2140 112 3 10 chr17 7458510 7458824 -77979656 + AluSx SINE Alu 1 312 0 992 136 0 30 chr17 7458824 7459008 -77979472 + AluSg/x SINE Alu 136 316 0 2002 107 40 0 chr17 7461036 7461334 -77977146 - AluSg SINE Alu 0 310 1 2001 114 3 29 chr17 7461339 7461647 -77976833 - AluSq SINE Alu -13 300 1 2309 88 3 0 chr17 7461652 7461959 -77976521 - AluY SINE Alu -3 308 1 2264 98 3 0 chr17 7462007 7462312 -77976168 + AluSq SINE Alu 1 306 -7 1405 174 10 30 chr17 7462312 7462616 -77975864 + AluJb SINE Alu 15 312 0 * 1410 179 0 39 chr17 7462615 7462716 -77975764 + AluJb SINE Alu 27 130 -182 1972 122 28 0 chr17 7462716 7463004 -77975476 + AluSx SINE Alu 1 296 -16 1995 123 19 10 chr17 7463005 7463313 -77975167 + AluSx SINE Alu 1 311 -1 1410 179 0 39 chr17 7463313 7463494 -77974986 + AluJb SINE Alu 129 300 -12 1587 191 3 7 chr17 7463496 7463789 -77974691 + AluJb SINE Alu 1 292 -20 2060 112 10 0 chr17 7463849 7464145 -77974335 - AluSp SINE Alu -14 299 1 2244 81 0 26 chr17 7464199 7464508 -77973972 - AluY SINE Alu -10 301 1 2287 90 0 0 chr17 7464683 7464982 -77973498 + AluSx SINE Alu 1 299 -13 2218 91 0 26 chr17 7465111 7465418 -77973062 + AluSx SINE Alu 1 299 -13 32 26 0 0 chr17 7465571 7465610 -77972870 + AT_rich Low_complexity Low_complexity 1 39 0 2235 93 0 19 chr17 7465631 7465941 -77972539 - AluSx SINE Alu -8 304 1 572 122 0 0 chr17 7465943 7466025 -77972455 - AluSq/x SINE Alu -176 136 55 370 191 44 0 chr17 7466049 7466117 -77972363 - tRNA-Ile-ATT tRNA tRNA -5 72 2 1647 148 3 66 chr17 7466132 7466327 -77972153 - AluJo SINE Alu -1 311 105 1942 156 0 0 chr17 7466327 7466629 -77971851 + AluSq SINE Alu 3 304 -9 2066 123 0 13 chr17 7466637 7466946 -77971534 + AluSx SINE Alu 3 307 -5 1647 148 3 66 chr17 7466946 7467073 -77971407 - AluJo SINE Alu -214 98 1 812 231 0 0 chr17 7467151 7467311 -77971169 - FRAM SINE Alu -16 160 1 243 182 0 0 chr17 7467322 7467366 -77971114 + Alu SINE Alu 211 254 -48 1547 246 110 35 chr17 7467464 7467522 -77970958 - HAL1 LINE L1 -260 2247 2195 2188 92 7 16 chr17 7467522 7467825 -77970655 - AluSq SINE Alu -8 305 6 1547 246 110 35 chr17 7467825 7467850 -77970630 - HAL1 LINE L1 -312 2195 2173 2260 98 3 0 chr17 7467850 7468147 -77970333 - AluSp SINE Alu -15 298 1 1547 246 110 35 chr17 7468147 7468649 -77969831 - HAL1 LINE L1 -334 2173 1609 1799 136 0 106 chr17 7468649 7468979 -77969501 + AluSx SINE Alu 1 295 -7 1547 246 110 35 chr17 7468979 7469020 -77969460 - HAL1 LINE L1 -898 1609 1572 2095 111 0 14 chr17 7469022 7469319 -77969161 - AluSx SINE Alu -19 293 1 831 170 0 0 chr17 7469319 7469454 -77969026 - AluJb SINE Alu -177 135 1 295 246 0 56 chr17 7469480 7469622 -77968858 - HAL1 LINE L1 -1214 1293 1160 2075 97 32 32 chr17 7469624 7469935 -77968545 - AluSx SINE Alu -1 311 1 35 0 0 0 chr17 7469943 7469978 -77968502 + AT_rich Low_complexity Low_complexity 1 35 0 2162 113 0 3 chr17 7470291 7470600 -77967880 - AluSg SINE Alu -2 308 1 2202 71 0 55 chr17 7470604 7470930 -77967550 - AluY SINE Alu -3 308 1 1602 121 16 52 chr17 7470931 7471236 -77967244 - AluSc SINE Alu -15 294 1 824 116 31 0 chr17 7471236 7471365 -77967115 - AluJb SINE Alu -176 136 4 2002 76 3 99 chr17 7471395 7471737 -77966743 - AluSx SINE Alu -3 309 1 200 208 19 19 chr17 7472364 7472417 -77966063 + (CGG)n Simple_repeat Simple_repeat 2 54 0 188 197 0 16 chr17 7472430 7472491 -77965989 + (CGG)n Simple_repeat Simple_repeat 2 61 0 27 49 0 0 chr17 7472518 7472559 -77965921 + GC_rich Low_complexity Low_complexity 1 41 0 26 50 0 0 chr17 7472577 7472617 -77965863 + GC_rich Low_complexity Low_complexity 1 40 0 2483 52 0 3 chr17 7474233 7474541 -77963939 - AluY SINE Alu -4 307 1 2130 124 0 0 chr17 7475559 7475866 -77962614 - AluSx SINE Alu -1 311 5 257 260 14 0 chr17 7475998 7476071 -77962409 - U13 snRNA snRNA -26 78 5 994 162 9 90 chr17 7477086 7477211 -77961269 - AluSx SINE Alu -87 225 124 1032 156 0 0 chr17 7477211 7477391 -77961089 + (TA)n Simple_repeat Simple_repeat 1 180 0 994 162 9 90 chr17 7477391 7477487 -77960993 - AluSx SINE Alu -188 124 22 1178 186 0 9 chr17 7478115 7478335 -77960145 - AluJb SINE Alu 0 312 95 542 232 27 21 chr17 7478349 7478527 -77959953 - L1MA10 LINE L1 0 6334 5998 1465 177 9 78 chr17 7478610 7478944 -77959536 - AluSx SINE Alu -1 311 1 244 148 93 0 chr17 7478945 7478999 -77959481 + L1M4 LINE L1 4889 4947 -1199 836 158 8 0 chr17 7479002 7479129 -77959351 + FLAM_C SINE Alu 2 129 -14 23 0 0 0 chr17 7479129 7479152 -77959328 + AT_rich Low_complexity Low_complexity 1 23 0 639 194 8 97 chr17 7479152 7479165 -77959315 + L1M4 LINE L1 4942 4955 -1191 2031 106 16 19 chr17 7479165 7479477 -77959003 + AluSp SINE Alu 1 311 -2 639 194 8 97 chr17 7479477 7479529 -77958951 + L1M4 LINE L1 4955 5010 -1136 2000 118 7 3 chr17 7479529 7479818 -77958662 + AluSx SINE Alu 1 290 -22 639 194 8 97 chr17 7479818 7479907 -77958573 + L1M4 LINE L1 5010 5070 -1076 2297 103 3 0 chr17 7479907 7480219 -77958261 - AluSq SINE Alu 0 313 1 639 194 8 97 chr17 7480219 7480310 -77958170 + L1M4 LINE L1 5070 5167 -979 2011 128 3 0 chr17 7481858 7482169 -77956311 - AluSx SINE Alu 0 312 1 2296 92 0 3 chr17 7482233 7482536 -77955944 + AluSq SINE Alu 1 302 -11 2006 120 17 0 chr17 7482551 7482842 -77955638 - AluSx SINE Alu -16 296 1 827 193 73 73 chr17 7482890 7483108 -77955372 - AluJo SINE Alu -94 218 1 2448 80 3 0 chr17 7483698 7484010 -77954470 - AluSp SINE Alu 0 313 1 846 170 0 15 chr17 7484056 7484191 -77954289 - FLAM_C SINE Alu 0 133 1 2267 74 0 42 chr17 7484507 7484675 -77953805 - AluSg SINE Alu -11 299 148 2249 78 0 14 chr17 7484675 7484971 -77953509 - AluSg SINE Alu -17 293 2 2267 74 0 42 chr17 7484971 7485114 -77953366 - AluSg SINE Alu -162 148 1 2190 105 0 0 chr17 7485315 7485609 -77952871 - AluSc SINE Alu -15 294 1 2144 110 3 0 chr17 7486057 7486358 -77952122 - AluSx SINE Alu -10 302 1 2008 132 0 0 chr17 7486364 7486652 -77951828 - AluSg SINE Alu -22 288 1 473 203 0 0 chr17 7486653 7486732 -77951748 - AluJ/FLAM SINE Alu -225 87 9 1749 116 53 32 chr17 7486767 7487051 -77951429 + AluSp SINE Alu 5 294 -19 2335 71 0 3 chr17 7487057 7487352 -77951128 + AluSq SINE Alu 1 294 -19 2046 125 13 3 chr17 7487357 7487661 -77950819 - AluSx SINE Alu -5 307 1 1735 177 3 25 chr17 7487925 7488104 -77950376 - AluSx SINE Alu -2 310 139 1751 146 38 0 chr17 7488104 7488392 -77950088 - AluSx SINE Alu -13 299 1 1735 177 3 25 chr17 7488392 7488529 -77949951 - AluSx SINE Alu -173 139 1 587 141 0 0 chr17 7488532 7488624 -77949856 - AluSg/x SINE Alu -4 305 214 418 297 195 31 chr17 7488624 7488771 -77949709 - L2 LINE L2 -430 2884 2762 2206 59 0 17 chr17 7488771 7489087 -77949393 - AluY SINE Alu 0 311 1 418 297 195 31 chr17 7489087 7489261 -77949219 - L2 LINE L2 -552 2762 2509 781 190 27 15 chr17 7489270 7489547 -77948933 + MER21B LTR ERV1 1 316 -547 604 110 26 3 chr17 7489547 7489777 -77948703 + AluSx SINE Alu 1 305 -4 2020 122 3 0 chr17 7490149 7490435 -77948045 - AluSc SINE Alu -22 287 1 207 252 89 98 chr17 7490604 7490727 -77947753 - MIR SINE MIR -64 144 23 2216 101 0 0 chr17 7490798 7491096 -77947384 + AluSx SINE Alu 1 298 -14 1284 148 110 76 chr17 7491510 7491800 -77946680 + AluJb SINE Alu 3 302 0 639 184 54 101 chr17 7491806 7491974 -77946506 + FRAM SINE Alu 2 161 -5 547 236 36 0 chr17 7491975 7492085 -77946395 - AluJo/FLAM SINE Alu -197 115 2 1574 148 3 96 chr17 7492111 7492455 -77946025 - AluSx SINE Alu 0 312 1 2252 72 24 0 chr17 7500801 7501091 -77937389 - AluSq SINE Alu -16 297 1 2115 124 0 3 chr17 7501703 7502001 -77936479 - AluSx SINE Alu -15 297 1 2382 71 0 3 chr17 7502237 7502545 -77935935 - AluSq SINE Alu -6 307 1 1839 77 26 89 chr17 7505301 7505614 -77932866 - AluSx SINE Alu -19 293 1 202 203 25 25 chr17 7507240 7507319 -77931161 + (TGG)n Simple_repeat Simple_repeat 1 79 0 1752 160 38 3 chr17 7510073 7510366 -77928114 - AluJo SINE Alu -9 303 1 798 247 34 38 chr17 7510412 7510472 -77928008 + L1M4 LINE L1 3554 3613 -2533 2051 129 23 3 chr17 7510472 7510774 -77927706 + AluSx SINE Alu 1 308 -4 798 247 34 38 chr17 7510774 7510946 -77927534 + L1M4 LINE L1 3613 3787 -2359 2325 109 0 13 chr17 7510946 7511082 -77927398 + AluSx SINE Alu 1 137 -175 2351 83 14 0 chr17 7511082 7511372 -77927108 + AluSg SINE Alu 1 294 -16 2325 109 0 13 chr17 7511372 7511547 -77926933 + AluSx SINE Alu 137 308 -4 798 247 34 38 chr17 7511547 7511605 -77926875 + L1M4 LINE L1 3787 3844 -2302 705 162 8 0 chr17 7511607 7511724 -77926756 + FLAM_C SINE Alu 2 119 -24 919 229 56 102 chr17 7511733 7511961 -77926519 + L1M4 LINE L1 3839 4076 -2070 2431 73 6 19 chr17 7511961 7512275 -77926205 + AluY SINE Alu 2 311 0 919 229 56 102 chr17 7512275 7512382 -77926098 + L1M4 LINE L1 4076 4186 -1960 2583 59 3 0 chr17 7512382 7512688 -77925792 + AluY SINE Alu 1 307 -4 1997 127 0 46 chr17 7512696 7512838 -77925642 + AluSq SINE Alu 6 153 -160 2436 78 3 3 chr17 7512838 7513134 -77925346 + AluSq SINE Alu 1 296 -17 1997 127 0 46 chr17 7513134 7513314 -77925166 + AluSq SINE Alu 153 313 0 919 229 56 102 chr17 7513314 7513388 -77925092 + L1M4 LINE L1 4193 4269 -1877 1787 106 64 8 chr17 7513388 7513651 -77924829 + AluSq SINE Alu 1 278 -35 2156 106 19 44 chr17 7513651 7513971 -77924509 + AluSx SINE Alu 1 312 0 919 229 56 102 chr17 7513652 7514048 -77924432 + L1M4 LINE L1 4269 4313 -1833 806 168 59 77 chr17 7514048 7514268 -77924212 + MER2 DNA MER2_type 2 217 -128 228 241 35 0 chr17 7514762 7514820 -77923660 - MIR SINE MIR -3 259 200 1992 128 14 3 chr17 7514847 7515179 -77923301 + AluSq SINE Alu 1 313 0 2443 80 13 0 chr17 7515243 7515544 -77922936 + AluSp SINE Alu 1 305 -8 1051 165 46 21 chr17 7515654 7515706 -77922774 + AluJo SINE Alu 85 134 -174 2258 117 0 16 chr17 7515706 7516023 -77922457 + AluSx SINE Alu 1 312 0 1051 165 46 21 chr17 7516023 7516189 -77922291 + AluJo SINE Alu 134 308 0 2165 125 6 0 chr17 7516196 7516507 -77921973 + AluSq SINE Alu 1 313 0 360 242 96 45 chr17 7516652 7516850 -77921630 - L2 LINE L2 -17 3296 3089 2216 118 3 0 chr17 7517221 7517517 -77920963 + AluSx SINE Alu 1 297 -15 199 268 134 45 chr17 7517518 7517697 -77920783 - L2 LINE L2 -1810 1504 1310 2024 143 0 16 chr17 7518740 7519047 -77919433 + AluJb SINE Alu 1 302 -10 184 283 33 54 chr17 7519669 7519761 -77918719 - MIR SINE MIR -70 192 103 2441 60 7 13 chr17 7519775 7520074 -77918406 + AluY SINE Alu 1 297 -14 729 108 15 54 chr17 7521164 7521294 -77917186 - MER47A DNA MER2_type 0 366 242 2252 95 0 47 chr17 7521294 7521611 -77916869 - AluSg SINE Alu -8 302 1 1204 179 28 14 chr17 7521623 7521841 -77916639 - AluJo SINE Alu -11 301 81 928 163 0 25 chr17 7521849 7522009 -77916471 - AluJb SINE Alu -24 288 133 236 53 26 0 chr17 7522009 7522047 -77916433 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 2145 85 7 11 chr17 7522047 7522330 -77916150 - AluSg SINE Alu -28 282 1 1631 192 31 3 chr17 7522332 7522624 -77915856 - AluJo SINE Alu -12 300 1 884 136 0 26 chr17 7522624 7522779 -77915701 - MER47A DNA MER2_type -116 250 100 2327 84 14 0 chr17 7522841 7523138 -77915342 + AluSx SINE Alu 1 301 -11 693 176 0 24 chr17 7523141 7523266 -77915214 + FLAM_A SINE Alu 5 126 -7 1717 161 28 3 chr17 7523267 7523558 -77914922 + AluSx SINE Alu 1 298 -14 441 245 0 19 chr17 7523573 7523679 -77914801 - MER47A DNA MER2_type -259 107 4 2260 83 23 13 chr17 7524236 7524538 -77913942 + AluSp SINE Alu 1 305 -8 242 320 58 10 chr17 7525192 7525295 -77913185 + MIR SINE MIR 110 217 -45 1936 153 10 0 chr17 7525587 7525887 -77912593 - AluJb SINE Alu -2 310 8 507 133 88 0 chr17 7526548 7526661 -77911819 - AluSq/x SINE Alu -190 123 1 708 326 96 16 chr17 7526667 7527041 -77911439 - L2 LINE L2 -18 3295 2892 2124 125 7 3 chr17 7527041 7527344 -77911136 + AluSx SINE Alu 1 304 -8 255 321 104 25 chr17 7527356 7527448 -77911032 + L2 LINE L2 1826 1909 -1405 2375 54 44 7 chr17 7527448 7527742 -77910738 - AluY SINE Alu -6 305 1 255 321 104 25 chr17 7527742 7527889 -77910591 + L2 LINE L2 1909 2084 -1230 286 286 0 0 chr17 7527960 7528023 -77910457 - L2 LINE L2 -2069 1245 1183 501 221 21 97 chr17 7528043 7528138 -77910342 + MIR SINE MIR 122 204 -58 2315 107 7 3 chr17 7528138 7528446 -77910034 + AluSx SINE Alu 1 309 -3 501 221 21 97 chr17 7528446 7528495 -77909985 + MIR SINE MIR 204 255 -7 196 288 25 25 chr17 7528558 7528638 -77909842 - L2 LINE L2 -2227 1087 1008 1160 80 7 20 chr17 7528702 7528852 -77909628 + AluSq/x SINE Alu 1 148 -165 27 49 0 0 chr17 7528862 7528903 -77909577 + AT_rich Low_complexity Low_complexity 1 41 0 2166 121 13 19 chr17 7528927 7529241 -77909239 - AluSx SINE Alu 0 312 1 907 193 73 73 chr17 7529289 7529507 -77908973 - AluJo SINE Alu -94 218 1 2592 80 3 0 chr17 7530097 7530409 -77908071 - AluSp SINE Alu 0 313 1 796 170 0 15 chr17 7530455 7530590 -77907890 - FLAM_C SINE Alu 0 133 1 2412 74 0 42 chr17 7530906 7531074 -77907406 - AluSg SINE Alu -11 299 148 2399 74 0 14 chr17 7531074 7531370 -77907110 - AluSg SINE Alu -17 293 2 2412 74 0 42 chr17 7531370 7531513 -77906967 - AluSg SINE Alu -162 148 1 2173 128 3 3 chr17 7531714 7532011 -77906469 - AluSx SINE Alu -15 297 1 1855 177 3 25 chr17 7532275 7532454 -77906026 - AluSx SINE Alu -2 310 139 1857 146 38 0 chr17 7532454 7532741 -77905739 - AluSx SINE Alu -14 298 1 1855 177 3 25 chr17 7532741 7532878 -77905602 - AluSx SINE Alu -173 139 1 550 141 0 0 chr17 7532881 7532973 -77905507 - AluSg/x SINE Alu -4 305 214 399 288 198 34 chr17 7532973 7533120 -77905360 - L2 LINE L2 -430 2884 2762 2347 59 0 17 chr17 7533120 7533436 -77905044 - AluY SINE Alu 0 311 1 399 288 198 34 chr17 7533436 7533610 -77904870 - L2 LINE L2 -552 2762 2509 772 190 27 15 chr17 7533619 7533896 -77904584 + MER21B LTR ERV1 1 316 -547 566 110 26 3 chr17 7533896 7534126 -77904354 + AluSx SINE Alu 1 305 -4 2148 122 3 0 chr17 7534498 7534784 -77903696 - AluSc SINE Alu -22 287 1 203 252 89 98 chr17 7534953 7535076 -77903404 - MIR SINE MIR -64 144 23 2348 101 0 0 chr17 7535147 7535445 -77903035 + AluSx SINE Alu 1 298 -14 1298 159 110 69 chr17 7535859 7536149 -77902331 + AluJo SINE Alu 3 304 -8 680 163 52 99 chr17 7536151 7536323 -77902157 + AluJb SINE Alu 134 297 -15 507 236 36 0 chr17 7536324 7536434 -77902046 - AluJo/FLAM SINE Alu -197 115 2 1680 151 3 96 chr17 7536460 7536804 -77901676 - AluSx SINE Alu 0 312 1 1949 134 7 0 chr17 7537466 7537750 -77900730 - AluSx SINE Alu -26 286 1 1626 160 93 0 chr17 7537782 7538051 -77900429 + AluJo SINE Alu 6 299 -13 2467 54 0 10 chr17 7538166 7538461 -77900019 - AluY SINE Alu -19 292 1 274 315 35 54 chr17 7538909 7539112 -77899368 + L2 LINE L2 2431 2629 -685 324 293 32 75 chr17 7539265 7539453 -77899027 - L2 LINE L2 -189 3083 2904 2664 52 0 0 chr17 7539497 7539804 -77898676 - AluY SINE Alu -4 307 1 372 298 113 36 chr17 7539890 7540138 -77898342 - L2 LINE L2 -785 2529 2263 344 272 28 51 chr17 7540219 7540245 -77898235 + L1ME3A LINE L1 5278 5303 -2505 2453 97 3 0 chr17 7540245 7540556 -77897924 + AluSx SINE Alu 1 312 0 344 272 28 51 chr17 7540556 7540584 -77897896 + L1ME3A LINE L1 5303 5330 -2478 2181 134 7 3 chr17 7540584 7540891 -77897589 + AluSx SINE Alu 1 308 -4 344 272 28 51 chr17 7540891 7541052 -77897428 + L1ME3A LINE L1 5330 5489 -2319 1307 180 9 0 chr17 7541077 7541288 -77897192 - AluJo SINE Alu -15 297 85 419 324 99 17 chr17 7541288 7541581 -77896899 + L1ME3A LINE L1 5517 5833 -337 1549 163 19 70 chr17 7541656 7541802 -77896678 + AluJo SINE Alu 1 153 -159 2173 93 4 7 chr17 7541802 7542080 -77896400 + AluSg1 SINE Alu 1 277 -32 306 0 0 0 chr17 7542082 7542116 -77896364 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 1549 163 19 70 chr17 7542116 7542279 -77896201 + AluJo SINE Alu 154 297 -15 2014 132 4 4 chr17 7542344 7542625 -77895855 + AluSx SINE Alu 1 281 -31 1991 124 3 26 chr17 7542974 7543280 -77895200 + AluSq SINE Alu 1 299 -14 2098 144 0 3 chr17 7543326 7543631 -77894849 + AluSx SINE Alu 1 304 -8 2359 88 0 26 chr17 7543639 7543946 -77894534 + AluSx SINE Alu 1 299 -13 32 26 0 0 chr17 7544099 7544138 -77894342 + AT_rich Low_complexity Low_complexity 1 39 0 2277 110 0 16 chr17 7544159 7544467 -77894013 - AluSx SINE Alu -9 303 1 532 122 0 0 chr17 7544469 7544551 -77893929 - AluSq/x SINE Alu -177 136 55 363 191 44 0 chr17 7544575 7544643 -77893837 - tRNA-Ile-ATT tRNA tRNA -5 72 2 1747 149 3 67 chr17 7544658 7544850 -77893630 - AluJo SINE Alu -4 308 105 2070 156 0 0 chr17 7544850 7545152 -77893328 + AluSq SINE Alu 3 304 -9 2197 123 0 13 chr17 7545160 7545469 -77893011 + AluSx SINE Alu 3 307 -5 1747 149 3 67 chr17 7545469 7545596 -77892884 - AluJo SINE Alu -214 98 1 207 209 0 0 chr17 7545616 7545659 -77892821 + T-rich Low_complexity Low_complexity 1 43 0 873 228 0 0 chr17 7545677 7545835 -77892645 - FRAM SINE Alu -18 158 1 238 182 0 0 chr17 7545846 7545890 -77892590 + Alu SINE Alu 211 254 -48 234 264 0 0 chr17 7545899 7545952 -77892528 - HAL1 LINE L1 -213 2294 2242 2324 92 7 16 chr17 7546046 7546349 -77892131 - AluSq SINE Alu -8 305 6 2420 91 3 0 chr17 7546374 7546671 -77891809 - AluSp SINE Alu -15 298 1 883 170 0 0 chr17 7546671 7546806 -77891674 - AluJb SINE Alu -177 135 1 335 228 0 102 chr17 7546807 7546974 -77891506 - HAL1 LINE L1 -1198 1309 1160 2217 97 32 32 chr17 7546976 7547287 -77891193 - AluSx SINE Alu -1 311 1 35 0 0 0 chr17 7547295 7547330 -77891150 + AT_rich Low_complexity Low_complexity 1 35 0 2300 94 0 3 chr17 7547665 7547952 -77890528 - AluSg SINE Alu -24 286 1 2367 71 0 43 chr17 7547956 7548278 -77890202 - AluY SINE Alu -3 308 1 1721 115 20 56 chr17 7548279 7548584 -77889896 - AluSc SINE Alu -15 294 1 713 119 56 0 chr17 7548584 7548710 -77889770 - AluJb SINE Alu -176 136 4 205 231 11 22 chr17 7548839 7548930 -77889550 + G-rich Low_complexity Low_complexity 5 94 0 405 174 0 0 chr17 7549504 7549573 -77888907 - AluS SINE Alu -239 70 2 207 191 44 0 chr17 7549666 7549734 -77888746 + (TA)n Simple_repeat Simple_repeat 2 72 0 328 300 94 65 chr17 7549744 7549904 -77888576 + L1M4 LINE L1 4225 4379 -1767 2147 144 7 0 chr17 7549904 7550210 -77888270 + AluSx SINE Alu 1 308 -4 328 300 94 65 chr17 7550210 7550436 -77888044 + L1M4 LINE L1 4379 4622 -1524 2159 100 4 4 chr17 7550520 7550799 -77887681 + AluSc SINE Alu 1 279 -30 1836 108 8 4 chr17 7550812 7551071 -77887409 + AluSx SINE Alu 44 303 -9 2117 129 0 3 chr17 7551078 7551373 -77887107 + AluSx SINE Alu 1 294 -18 1448 137 15 0 chr17 7551929 7552133 -77886347 - AluSx SINE Alu -105 207 1 948 49 21 0 chr17 7552137 7552280 -77886200 + (TCTA)n Simple_repeat Simple_repeat 1 146 0 413 190 60 0 chr17 7552280 7552380 -77886100 - FLAM_C SINE Alu -27 116 11 2194 116 0 3 chr17 7552382 7552676 -77885804 - AluSx SINE Alu -19 293 1 1427 239 106 20 chr17 7552676 7553178 -77885302 + HAL1 LINE L1 1600 2144 -363 477 139 0 13 chr17 7553180 7553259 -77885221 + AluS SINE Alu 2 79 -233 480 179 0 0 chr17 7553547 7553631 -77884849 + AluJ/FRAM SINE Alu 216 299 -13 1200 193 10 0 chr17 7553746 7553953 -77884527 - AluJo SINE Alu -19 293 85 212 286 236 11 chr17 7555392 7555574 -77882906 + L2 LINE L2 2492 2714 -600 1285 117 0 48 chr17 7555579 7555767 -77882713 + AluSc SINE Alu 1 179 -130 332 198 77 11 chr17 7755829 7755920 -77682560 - U6 snRNA snRNA -9 98 2 369 330 131 44 chr17 7755961 7756486 -77681994 + L2 LINE L2 2524 3182 -90 2239 119 0 13 chr17 7756486 7756796 -77681684 - AluSc SINE Alu -3 306 1 369 330 131 44 chr17 7756796 7756872 -77681608 + L2 LINE L2 3182 3250 -22 595 229 150 9 chr17 7757090 7757101 -77681379 + L1MB2 LINE L1 5892 5900 -271 1927 170 0 0 chr17 7757101 7757407 -77681073 + AluJb SINE Alu 1 306 -6 595 229 150 9 chr17 7757407 7757622 -77680858 + L1MB2 LINE L1 5900 6150 -21 2230 98 0 7 chr17 7757631 7757918 -77680562 - AluY SINE Alu -26 285 1 861 157 0 0 chr17 7758263 7758384 -77680096 - FLAM_C SINE Alu -22 121 1 702 253 54 5 chr17 7758575 7758761 -77679719 + MIR SINE MIR 67 261 -1 2130 126 7 0 chr17 7759019 7759312 -77679168 - AluSx SINE Alu -17 295 1 229 281 62 42 chr17 7759802 7759898 -77678582 - MIR SINE MIR -6 256 159 800 277 210 12 chr17 7760118 7760699 -77677781 + L2 LINE L2 1889 2584 -730 214 210 0 32 chr17 7761902 7761964 -77676516 + C-rich Low_complexity Low_complexity 6 65 0 22 56 0 0 chr17 7762069 7762105 -77676375 + AT_rich Low_complexity Low_complexity 1 36 0 2228 124 0 0 chr17 7762240 7762539 -77675941 + AluJb SINE Alu 13 311 -1 745 177 0 8 chr17 7762802 7762932 -77675548 + FLAM_A SINE Alu 13 141 -1 2305 85 3 0 chr17 7762952 7763255 -77675225 - AluSp SINE Alu 0 304 1 241 259 50 29 chr17 7763911 7764050 -77674430 + HAL1b LINE L1 152 293 -1055 328 270 0 11 chr17 7764096 7764185 -77674295 + L1MC4 LINE L1 7444 7531 -511 498 77 15 0 chr17 7764300 7764365 -77674115 - AluS SINE Alu -246 67 2 1647 194 41 6 chr17 7764366 7764711 -77673769 + MER21B LTR ERV1 447 803 -60 2070 99 59 6 chr17 7764717 7764784 -77673696 - MER2 DNA MER2_type 0 345 283 2319 74 0 42 chr17 7764784 7765096 -77673384 + AluSx SINE Alu 3 301 -11 2070 99 59 6 chr17 7765096 7765351 -77673129 - MER2 DNA MER2_type -62 283 6 225 184 0 0 chr17 7765354 7765392 -77673088 + MER21B LTR ERV1 815 852 -11 211 341 0 31 chr17 7765910 7766039 -77672441 + G-rich Low_complexity Low_complexity 4 128 0 619 303 101 0 chr17 7766332 7766550 -77671930 + MIR SINE MIR 3 242 -20 1972 163 0 0 chr17 7766582 7766888 -77671592 + AluJb SINE Alu 1 306 -6 2551 79 0 0 chr17 7767102 7767406 -77671074 - AluSq SINE Alu -4 309 6 337 272 97 61 chr17 7768104 7768218 -77670262 - MIR SINE MIR -122 140 23 1861 125 96 0 chr17 7768295 7768575 -77669905 - AluJo SINE Alu 0 312 6 1107 80 12 19 chr17 7768589 7768751 -77669729 - L1PA13 LINE L1 0 6163 6003 2045 114 4 4 chr17 7768820 7769100 -77669380 + AluSx SINE Alu 1 280 -32 2274 105 0 38 chr17 7769501 7769815 -77668665 + AluSx SINE Alu 1 302 -10 526 160 0 75 chr17 7771605 7771711 -77666769 + FLAM_A SINE Alu 1 98 -44 2082 93 0 25 chr17 7771879 7772159 -77666321 - AluSx SINE Alu -39 273 1 22 0 0 0 chr17 7772159 7772181 -77666299 + AT_rich Low_complexity Low_complexity 1 22 0 876 187 0 13 chr17 7772473 7772646 -77665834 - AluSg/x SINE Alu 0 304 134 2388 104 0 3 chr17 7772972 7773279 -77665201 - AluSx SINE Alu -6 306 1 524 218 88 41 chr17 7773417 7773564 -77664916 + MIR SINE MIR 20 173 -89 2091 119 25 0 chr17 7773850 7774136 -77664344 + AluSx SINE Alu 6 298 -14 1149 145 36 54 chr17 7775017 7775238 -77663242 - AluJo SINE Alu -5 307 91 2085 103 65 14 chr17 7775253 7775544 -77662936 - AluSx SINE Alu -6 306 1 487 229 109 18 chr17 7775740 7775920 -77662560 + MIR SINE MIR 17 212 -50 346 288 45 51 chr17 7776003 7776087 -77662393 - L2 LINE L2 -177 3095 3012 2487 75 3 0 chr17 7776087 7776393 -77662087 - AluY SINE Alu -4 307 1 346 288 45 51 chr17 7776393 7776485 -77661995 - L2 LINE L2 -260 3012 2920 467 273 12 62 chr17 7776559 7776720 -77661760 - MIR SINE MIR -62 200 48 2283 85 0 42 chr17 7776739 7776910 -77661570 - AluSg SINE Alu -16 294 117 180 0 0 0 chr17 7776910 7776930 -77661550 + (TTTA)n Simple_repeat Simple_repeat 3 22 0 2226 69 44 0 chr17 7776931 7777205 -77661275 - AluY SINE Alu -25 286 1 2283 85 0 42 chr17 7777205 7777338 -77661142 - AluSg SINE Alu -192 118 1 2029 159 0 3 chr17 7778213 7778521 -77659959 - AluSx SINE Alu -5 307 1 189 0 0 0 chr17 7778542 7778563 -77659917 + (T)n Simple_repeat Simple_repeat 1 21 0 1115 106 0 4 chr17 7778600 7778817 -77659663 - AluJb SINE Alu -10 302 2 2264 101 10 0 chr17 7779378 7779675 -77658805 + AluSx SINE Alu 1 300 -12 2181 83 0 0 chr17 7779933 7780199 -77658281 - AluSx SINE Alu -46 266 1 336 298 48 36 chr17 7780199 7780367 -77658113 - L1MC4a LINE L1 -1916 5892 5723 23 0 0 0 chr17 7780413 7780436 -77658044 + AT_rich Low_complexity Low_complexity 1 23 0 379 290 142 12 chr17 7780445 7780614 -77657866 - MIR3 SINE MIR -4 204 14 556 165 119 0 chr17 7781165 7781274 -77657206 - FLAM_C SINE Alu -17 126 5 277 121 0 35 chr17 7781283 7781341 -77657139 + (TTCC)n Simple_repeat Simple_repeat 3 58 0 2189 134 0 3 chr17 7781341 7781654 -77656826 - AluJb SINE Alu 0 312 1 2203 109 0 0 chr17 7781666 7781978 -77656502 - AluSx SINE Alu 0 312 1 268 267 67 0 chr17 7782018 7782093 -77656387 + MER5B DNA MER1_type 61 140 -38 1704 208 58 3 chr17 7782767 7783113 -77655367 - MLT1A1 LTR MaLR 0 365 1 782 293 150 49 chr17 7783363 7783851 -77654629 + L1M4 LINE L1 4519 5055 -1091 29 0 0 0 chr17 7783851 7783880 -77654600 + AT_rich Low_complexity Low_complexity 1 29 0 595 155 0 2 chr17 7783883 7784147 -77654333 + AluSx SINE Alu 1 312 0 252 221 15 0 chr17 7784584 7784652 -77653828 + HAL1 LINE L1 840 908 -1599 824 197 152 26 chr17 7784666 7784975 -77653505 + HAL1 LINE L1 1581 1928 -579 529 133 13 0 chr17 7785081 7785156 -77653324 + AluS SINE Alu 2 77 -235 2311 92 0 7 chr17 7785254 7785549 -77652931 - AluSg SINE Alu -17 293 1 420 284 49 11 chr17 7785550 7785733 -77652747 + HAL1 LINE L1 2029 2218 -289 2540 81 3 0 chr17 7785916 7786226 -77652254 - AluSp SINE Alu -2 311 1 1907 158 3 3 chr17 7786457 7786760 -77651720 + AluJb SINE Alu 1 303 -9 352 242 25 50 chr17 7787822 7787983 -77650497 + L1MC4a LINE L1 5734 5890 -1918 709 112 103 26 chr17 7787988 7788104 -77650376 + FLAM_C SINE Alu 5 129 -4 1562 136 17 4 chr17 7788223 7788458 -77650022 - AluJb SINE Alu -74 238 1 347 160 140 0 chr17 7788461 7788561 -77649919 - Charlie5 DNA MER1_type -76 2536 2423 1952 134 35 0 chr17 7788573 7788856 -77649624 - AluSx SINE Alu -19 293 1 2306 141 19 8 chr17 7789551 7789912 -77648568 - MLT1A1 LTR MaLR 0 365 1 865 211 30 20 chr17 7789978 7790140 -77648340 - MER3 DNA MER1_type 0 209 43 406 101 159 0 chr17 7790140 7790209 -77648271 + MADE1 DNA Mariner 1 80 0 865 211 30 20 chr17 7790209 7790245 -77648235 - MER3 DNA MER1_type -166 43 9 332 281 88 77 chr17 7791846 7791904 -77646576 - L1M4 LINE L1 -1670 4476 4420 387 41 0 0 chr17 7791904 7791953 -77646527 + (CA)n Simple_repeat Simple_repeat 2 50 0 332 281 88 77 chr17 7791953 7792154 -77646326 - L1M4 LINE L1 -1726 4420 4214 2646 40 0 0 chr17 7792186 7792482 -77645998 + AluY SINE Alu 1 296 -15 756 194 35 6 chr17 7792617 7792787 -77645693 + Charlie8 DNA MER1_type 75 249 -2168 582 297 110 78 chr17 7792898 7793424 -77645056 - L2 LINE L2 -818 2496 1929 2337 103 0 0 chr17 7793424 7793726 -77644754 + AluSx SINE Alu 2 303 -9 582 297 110 78 chr17 7793726 7794070 -77644410 - L2 LINE L2 -1385 1929 1598 475 326 91 50 chr17 7794748 7795186 -77643294 - L2 LINE L2 -1756 1558 1103 2593 59 0 7 chr17 7796086 7796393 -77642087 - AluY SINE Alu -6 305 1 1661 103 0 4 chr17 7796436 7796678 -77641802 - Tigger5 DNA MER2_type -31 2292 2052 271 136 0 0 chr17 7796674 7796718 -77641762 - Tigger5 DNA MER2_type -2265 58 15 * 27 49 0 0 chr17 7796763 7796804 -77641676 + AT_rich Low_complexity Low_complexity 1 41 0 2045 138 3 10 chr17 7796899 7797199 -77641281 - AluJb SINE Alu -16 296 1 203 360 140 18 chr17 7797232 7797346 -77641134 + L2 LINE L2 3181 3308 -5 2357 81 0 0 chr17 7797908 7798205 -77640275 - AluSx SINE Alu -15 297 1 418 329 24 44 chr17 7798569 7798821 -77639659 + L2 LINE L2 2511 2757 -557 879 152 0 0 chr17 7798944 7799076 -77639404 - FLAM_C SINE Alu -1 132 1 2124 107 3 0 chr17 7799088 7799378 -77639102 - AluSx SINE Alu -19 293 3 1813 115 4 4 chr17 7799481 7799741 -77638739 - AluSq SINE Alu -53 260 1 1833 146 28 0 chr17 7800098 7800385 -77638095 - AluJb SINE Alu -17 295 1 1539 177 89 0 chr17 7800568 7800735 -77637745 - AluJb SINE Alu -5 307 156 189 0 0 0 chr17 7800735 7800756 -77637724 + (TTG)n Simple_repeat Simple_repeat 1 21 0 1539 177 89 0 chr17 7800756 7800870 -77637610 - AluJb SINE Alu -156 156 1 2223 85 13 3 chr17 7800929 7801234 -77637246 - AluSq SINE Alu -5 308 1 332 313 55 0 chr17 7801246 7801485 -77636995 - L1ME3A LINE L1 -295 5875 5677 1048 26 45 7 chr17 7803297 7803451 -77635029 + (TTTC)n Simple_repeat Simple_repeat 1 160 0 812 155 14 7 chr17 7803485 7803627 -77634853 - AluJo SINE Alu -169 143 1 421 220 10 10 chr17 7804509 7804609 -77633871 + MER96B DNA MER1_type? 1 100 -317 1837 135 0 0 chr17 7804612 7804879 -77633601 - AluSx SINE Alu -6 306 40 806 189 22 22 chr17 7805032 7805254 -77633226 - MER96B DNA MER1_type? -97 320 99 1674 154 0 4 chr17 7805254 7805513 -77632967 + AluJb SINE Alu 1 258 -54 313 70 35 0 chr17 7805514 7805571 -77632909 + (TA)n Simple_repeat Simple_repeat 2 60 0 1573 107 9 5 chr17 7805578 7805802 -77632678 + AluSp SINE Alu 1 225 -88 1150 148 0 0 chr17 7807262 7807438 -77631042 - AluSg/x SINE Alu 0 312 137 2327 90 0 0 chr17 7807438 7807739 -77630741 - AluSx SINE Alu -11 301 1 2132 108 3 10 chr17 7808260 7808566 -77629914 - AluSx SINE Alu -8 304 1 662 169 54 0 chr17 7808576 7808724 -77629756 - L1MB7 LINE L1 0 6184 6029 1566 220 72 2 chr17 7808799 7809199 -77629281 - L1MB5 LINE L1 -154 6020 5593 2455 74 0 3 chr17 7809218 7809530 -77628950 - AluY SINE Alu 0 311 1 2223 106 3 0 chr17 7809530 7809831 -77628649 - AluSx SINE Alu -9 303 1 1289 100 0 0 chr17 7810571 7810741 -77627739 - AluSx SINE Alu -142 170 1 390 271 23 97 chr17 7810742 7810801 -77627679 - L1MB5 LINE L1 -749 5397 5335 2049 96 0 59 chr17 7810801 7811104 -77627376 - AluSg SINE Alu -25 285 1 390 271 23 97 chr17 7811104 7811245 -77627235 - L1MB5 LINE L1 -811 5335 5244 2123 109 0 0 chr17 7811350 7811661 -77626819 - AluSx SINE Alu 0 311 1 2230 99 3 0 chr17 7811663 7811957 -77626523 - AluSx SINE Alu -17 295 1 225 0 0 0 chr17 7812257 7812282 -77626198 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 369 363 73 26 chr17 7812750 7812826 -77625654 - L2 LINE L2 -22 3250 3179 2363 81 0 13 chr17 7812826 7813136 -77625344 + AluSc SINE Alu 1 306 -3 369 363 73 26 chr17 7813136 7813362 -77625118 - L2 LINE L2 -93 3179 2934 683 189 0 0 chr17 7813522 7813633 -77624847 - FLAM_C SINE Alu -32 111 1 198 0 0 0 chr17 7813654 7813676 -77624804 + (T)n Simple_repeat Simple_repeat 1 22 0 1105 101 0 4 chr17 7813712 7813930 -77624550 - AluJb SINE Alu -10 302 1 2382 87 0 3 chr17 7814638 7814948 -77623532 - AluSc SINE Alu 0 309 1 3359 172 33 57 chr17 7815471 7815512 -77622968 - L1MB5 LINE L1 0 6174 6134 2196 113 0 7 chr17 7815512 7815821 -77622659 - AluSx SINE Alu -5 307 1 3359 172 33 57 chr17 7815821 7816600 -77621880 - L1MB5 LINE L1 -40 6134 5374 3486 149 35 20 chr17 7817291 7817893 -77620587 - L1MA8 LINE L1 -1 6290 5680 2032 133 0 13 chr17 7818025 7818333 -77620147 - AluSx SINE Alu -8 304 1 509 317 70 10 chr17 7818340 7818539 -77619941 - L1MB5 LINE L1 -964 5182 4972 23 33 0 0 chr17 7818570 7818600 -77619880 + AT_rich Low_complexity Low_complexity 1 30 0 484 211 16 32 chr17 7818739 7818862 -77619618 + MIR SINE MIR 100 220 -42 820 247 60 40 chr17 7820477 7820737 -77617743 + MIR SINE MIR 2 261 -1 240 263 47 23 chr17 7821000 7821171 -77617309 + (CAGAGA)n Simple_repeat Simple_repeat 1 175 0 468 77 0 0 chr17 7826346 7826411 -77612069 + (CCA)n Simple_repeat Simple_repeat 2 66 0 219 69 0 0 chr17 7826901 7826930 -77611550 + (CAG)n Simple_repeat Simple_repeat 1 29 0 1335 82 0 0 chr17 7827350 7827521 -77610959 + AluSq SINE Alu 136 306 -7 671 267 108 0 chr17 7827538 7827714 -77610766 - MER91A DNA MER1_type 0 196 2 187 360 58 12 chr17 7829349 7829435 -77609045 + MIR SINE MIR 21 110 -152 2194 97 3 7 chr17 7829697 7829996 -77608484 + AluSq SINE Alu 1 298 -15 234 241 0 60 chr17 7831606 7831689 -77606791 + G-rich Low_complexity Low_complexity 3 80 0 201 39 0 0 chr17 7832102 7832128 -77606352 + (CGGGG)n Simple_repeat Simple_repeat 3 28 0 2404 94 0 0 chr17 7834069 7834377 -77604103 + AluSp SINE Alu 1 308 -5 2324 105 0 0 chr17 7834473 7834779 -77603701 + AluSx SINE Alu 1 306 -6 415 232 71 0 chr17 7835104 7835216 -77603264 - L2 LINE L2 -1 3312 3193 2363 93 0 3 chr17 7835787 7836097 -77602383 - AluSg SINE Alu -1 309 1 2260 94 3 22 chr17 7837432 7837750 -77600730 - AluSx SINE Alu 0 312 1 1936 139 36 3 chr17 7837757 7838059 -77600421 - AluJb SINE Alu 0 312 1 1147 143 94 25 chr17 7837974 7838069 -77600411 - AluJo SINE Alu -92 220 133 2458 86 0 0 chr17 7838069 7838373 -77600107 - AluSx SINE Alu -8 304 1 1147 143 94 25 chr17 7838373 7838493 -77599987 - AluJo SINE Alu -179 133 3 2375 109 0 0 chr17 7839020 7839323 -77599157 + AluSq SINE Alu 1 303 -10 2434 76 0 19 chr17 7840632 7840949 -77597531 - AluY SINE Alu 0 311 1 2524 79 0 0 chr17 7841444 7841748 -77596732 + AluSx SINE Alu 1 304 -8 762 292 29 0 chr17 7842440 7842649 -77595831 + MIR SINE MIR 28 242 -20 740 183 0 7 chr17 7843523 7843676 -77594804 + CT-rich Low_complexity Low_complexity 1 152 0 2472 70 0 3 chr17 7843676 7843975 -77594505 - AluY SINE Alu -13 298 1 1817 90 9 0 chr17 7843975 7844207 -77594273 - AluSp SINE Alu -6 307 74 2197 132 0 3 chr17 7844396 7844699 -77593781 + AluSx SINE Alu 1 302 -10 2123 124 7 0 chr17 7845632 7845930 -77592550 + AluJb SINE Alu 1 300 -12 317 231 74 9 chr17 7846121 7846229 -77592251 - L2 LINE L2 0 3313 3199 1846 77 0 0 chr17 7846346 7846567 -77591913 + AluSg/x SINE Alu 87 307 -5 391 103 0 0 chr17 7847241 7847299 -77591181 - Alu SINE Alu 0 301 244 2272 82 41 0 chr17 7847640 7847933 -77590547 + AluSg SINE Alu 1 305 -5 350 249 259 16 chr17 7848112 7848208 -77590272 + L1ME LINE L1 4373 4444 -1702 858 245 58 37 chr17 7848208 7848502 -77589978 + AluJo SINE Alu 1 300 -2 350 249 259 16 chr17 7848502 7848722 -77589758 + L1ME LINE L1 4444 4766 -1380 1376 189 66 4 chr17 7848738 7848997 -77589483 + AluJb SINE Alu 6 280 -32 216 0 0 0 chr17 7848998 7849022 -77589458 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1037 244 88 31 chr17 7849029 7849206 -77589274 + L1ME LINE L1 4773 4939 -1207 2291 123 0 0 chr17 7849206 7849516 -77588964 + AluSx SINE Alu 1 310 -2 1037 244 88 31 chr17 7849516 7849818 -77588662 + L1ME LINE L1 4939 5279 -867 231 267 19 29 chr17 7849808 7849913 -77588567 + L1ME LINE L1 5818 5921 -249 * 2469 79 3 3 chr17 7850112 7850416 -77588064 + AluSx SINE Alu 1 304 -8 1617 104 0 58 chr17 7850623 7850864 -77587616 + AluSx SINE Alu 1 227 -85 482 160 0 0 chr17 7850939 7851014 -77587466 - AluS SINE Alu -237 76 2 243 235 20 0 chr17 7851050 7851101 -77587379 - MLT1B LTR MaLR -295 95 44 668 198 28 55 chr17 7851881 7852063 -77586417 + MIR SINE MIR 86 262 0 269 118 20 0 chr17 7853570 7853621 -77584859 + CT-rich Low_complexity Low_complexity 1 52 0 2302 111 3 0 chr17 7853641 7853939 -77584541 - AluSq SINE Alu -14 299 1 815 240 102 79 chr17 7854163 7854634 -77583846 - L2 LINE L2 0 3313 2832 2010 107 0 18 chr17 7854681 7854961 -77583519 + AluJb SINE Alu 1 275 -37 736 240 158 58 chr17 7854973 7855335 -77583145 - L2 LINE L2 -1961 1353 956 2181 118 3 0 chr17 7855907 7856194 -77582286 - AluSq SINE Alu -25 288 1 276 263 50 12 chr17 7856233 7856313 -77582167 - L2 LINE L2 -15 3257 3175 753 158 0 0 chr17 7856844 7856971 -77581509 + FLAM_C SINE Alu 2 128 -5 399 198 31 0 chr17 7857143 7857239 -77581241 + MER5A DNA MER1_type 4 102 -87 278 278 93 0 chr17 7857312 7857420 -77581060 - L2 LINE L2 -1021 2293 2176 501 231 134 43 chr17 7860395 7860581 -77577899 + MIR SINE MIR 3 205 -57 869 135 8 15 chr17 7860852 7860985 -77577495 + AluJb SINE Alu 1 132 -180 497 308 0 15 chr17 7861181 7861451 -77577029 + (TG)n Simple_repeat Simple_repeat 1 265 0 629 97 11 0 chr17 7861838 7861931 -77576549 + AluSg1 SINE Alu 2 95 -214 347 324 15 93 chr17 7861970 7862082 -77576398 - HAL1 LINE L1 -13 2494 2404 1974 104 90 0 chr17 7862082 7862360 -77576120 - AluSp SINE Alu -10 303 1 347 324 15 93 chr17 7862360 7862451 -77576029 - HAL1 LINE L1 -103 2404 2307 469 300 104 58 chr17 7862478 7862708 -77575772 - L1MC5 LINE L1 -32 8010 7660 184 264 264 0 chr17 7862936 7863027 -77575453 + L2 LINE L2 3156 3270 -2 2387 97 0 0 chr17 7863027 7863326 -77575154 - AluSx SINE Alu -13 299 1 531 261 31 0 chr17 7863399 7863560 -77574920 - L1MC4a LINE L1 -1959 5849 5684 705 118 26 92 chr17 7863562 7863714 -77574766 + FLAM_C SINE Alu 2 143 0 1970 107 0 92 chr17 7863987 7864313 -77574167 - AluSq SINE Alu -17 296 1 938 191 0 0 chr17 7864313 7864465 -77574015 - FRAM SINE Alu -9 167 16 2455 88 3 7 chr17 7864884 7865192 -77573288 - AluSx SINE Alu -5 307 1 214 171 0 0 chr17 7865636 7865671 -77572809 + (CA)n Simple_repeat Simple_repeat 1 35 0 2262 124 0 3 chr17 7866315 7866622 -77571858 - AluSx SINE Alu -6 306 1 346 196 196 0 chr17 7868118 7868215 -77570265 + MIR SINE MIR 17 132 -130 422 293 32 16 chr17 7868256 7868379 -77570101 - L2 LINE L2 -6 3307 3183 312 192 88 16 chr17 7868624 7868672 -77569808 - L1MEd LINE L1 -3175 2954 2911 2435 68 0 29 chr17 7868672 7868980 -77569500 + AluSx SINE Alu 1 299 -13 312 192 88 16 chr17 7868980 7869056 -77569424 - L1MEd LINE L1 -3218 2911 2821 788 280 21 7 chr17 7869080 7869362 -77569118 - L1M4 LINE L1 -3531 2615 2330 931 222 54 102 chr17 7869468 7869511 -77568969 - L1MEd LINE L1 -3435 2694 2650 782 222 0 18 chr17 7869511 7869678 -77568802 - FRAM SINE Alu -2 164 1 931 222 54 102 chr17 7869678 7870153 -77568327 - L1MEd LINE L1 -3479 2650 2201 269 175 0 38 chr17 7870168 7870248 -77568232 - HAL1 LINE L1 -413 2094 2018 1470 186 91 11 chr17 7870249 7870534 -77567946 - AluJb SINE Alu -4 308 1 243 0 0 0 chr17 7870547 7870574 -77567906 + (TTTTTG)n Simple_repeat Simple_repeat 3 29 0 736 263 91 51 chr17 7870583 7870698 -77567782 - HAL1 LINE L1 -481 2026 1917 2457 67 3 0 chr17 7870698 7871007 -77567473 + AluSp SINE Alu 1 310 0 736 263 91 51 chr17 7871007 7871221 -77567259 - HAL1 LINE L1 -590 1917 1683 901 183 35 6 chr17 7871221 7871390 -77567090 - AluJo SINE Alu -138 174 1 1417 279 79 47 chr17 7871396 7872171 -77566309 - L1MEd LINE L1 -5318 801 2 252 320 23 64 chr17 7872253 7872425 -77566055 - L2 LINE L2 -2299 1015 851 376 267 69 0 chr17 7872436 7872537 -77565943 - MIR SINE MIR -68 140 33 2114 142 0 10 chr17 7872572 7872882 -77565598 - AluJb SINE Alu -5 307 1 1992 103 0 0 chr17 7875206 7875459 -77563021 + AluSx SINE Alu 1 253 -59 198 0 0 0 chr17 7875461 7875483 -77562997 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 708 104 0 0 chr17 7876916 7877022 -77561458 - AluJo SINE Alu -1 311 206 1028 96 39 45 chr17 7877022 7877178 -77561302 - AluJo SINE Alu -157 155 1 2273 128 0 0 chr17 7877584 7877890 -77560590 - AluSx SINE Alu -6 306 1 2517 83 3 6 chr17 7878355 7878669 -77559811 - AluSp SINE Alu 0 313 1 3894 137 51 48 chr17 7879574 7880043 -77558437 + MER44D DNA MER2_type 1 346 -2141 2436 104 0 0 chr17 7880043 7880350 -77558130 + AluSx SINE Alu 1 307 -5 3894 137 51 48 chr17 7880350 7880611 -77557869 + MER44D DNA MER2_type 346 605 0 2152 112 3 3 chr17 7880999 7881320 -77557160 + AluSp SINE Alu 1 321 0 22 0 0 0 chr17 7881753 7881775 -77556705 + AT_rich Low_complexity Low_complexity 1 22 0 2028 138 7 0 chr17 7882057 7882347 -77556133 + AluSx SINE Alu 1 292 -20 22 0 0 0 chr17 7882347 7882369 -77556111 + AT_rich Low_complexity Low_complexity 1 22 0 201 175 0 0 chr17 7883882 7883922 -77554558 + (CAG)n Simple_repeat Simple_repeat 1 40 0 306 50 0 0 chr17 7884482 7884522 -77553958 + (CCA)n Simple_repeat Simple_repeat 2 41 0 226 253 0 36 chr17 7884540 7884623 -77553857 + C-rich Low_complexity Low_complexity 2 81 0 21 0 0 0 chr17 7889327 7889348 -77549132 + GC_rich Low_complexity Low_complexity 1 21 0 21 57 0 0 chr17 7889605 7889640 -77548840 + AT_rich Low_complexity Low_complexity 1 35 0 31 0 0 0 chr17 7890349 7890380 -77548100 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr17 7890705 7890726 -77547754 + AT_rich Low_complexity Low_complexity 1 21 0 381 362 65 25 chr17 7896056 7896090 -77542390 - MIR SINE MIR -35 227 196 1528 137 23 46 chr17 7896090 7896353 -77542127 - AluJo SINE Alu -18 294 38 381 362 65 25 chr17 7896353 7896517 -77541963 - MIR SINE MIR -66 196 21 478 310 221 28 chr17 7897561 7898219 -77540261 + L2 LINE L2 2472 3267 -5 2330 101 0 13 chr17 7898398 7898714 -77539766 + AluSq SINE Alu 1 312 -1 1322 167 107 4 chr17 7900307 7900540 -77537940 - AluJo SINE Alu -55 257 1 437 148 206 77 chr17 7900540 7900565 -77537915 - Tigger4(Zombi) DNA MER2_type -186 2545 2525 2092 121 31 0 chr17 7900565 7900855 -77537625 + AluSx SINE Alu 1 299 -13 437 148 206 77 chr17 7900855 7900984 -77537496 - Tigger4(Zombi) DNA MER2_type -206 2525 1 438 248 38 15 chr17 7901128 7901261 -77537219 - MIR SINE MIR -62 200 65 374 197 0 0 chr17 7901341 7901402 -77537078 - MLT1G1 LTR MaLR -70 525 465 588 204 157 9 chr17 7901420 7901695 -77536785 - MLT1G1 LTR MaLR -194 348 3 365 237 119 17 chr17 7901840 7901958 -77536522 - L2 LINE L2 0 3272 3143 2506 43 0 68 chr17 7902027 7902350 -77536130 - AluY SINE Alu -10 301 1 2256 89 31 0 chr17 7902720 7903012 -77535468 - AluSg SINE Alu -7 303 3 304 320 107 0 chr17 7903196 7903318 -77535162 - L2 LINE L2 -7 3306 3172 603 334 218 22 chr17 7903603 7904955 -77533525 - L2 LINE L2 -1230 2084 469 2497 85 3 3 chr17 7904957 7905264 -77533216 + AluSq SINE Alu 1 307 -6 1860 160 3 3 chr17 7905267 7905574 -77532906 + AluJo SINE Alu 1 307 0 1761 165 10 13 chr17 7905679 7905982 -77532498 - AluJo SINE Alu -1 311 10 3020 135 56 4 chr17 7906008 7906564 -77531916 - L1MB7 LINE L1 -19 6165 5581 325 219 143 19 chr17 7907201 7907306 -77531174 - L1MC4a LINE L1 -1818 5990 5873 365 273 74 69 chr17 7907596 7907812 -77530668 - L1MC4a LINE L1 -1780 6028 5812 328 106 0 0 chr17 7907828 7907875 -77530605 - MER4E LTR ERV1 -69 710 664 498 313 30 20 chr17 7907900 7908101 -77530379 - L1MC4a LINE L1 -2032 5776 5574 329 344 46 7 chr17 7908228 7908379 -77530101 + MIR3 SINE MIR 16 172 -36 540 178 20 27 chr17 7908511 7908657 -77529823 - MER113 DNA MER1_type? -365 156 12 2016 93 0 15 chr17 7908819 7909088 -77529392 + AluSq SINE Alu 26 290 -23 24 53 0 0 chr17 7909089 7909127 -77529353 + AT_rich Low_complexity Low_complexity 1 38 0 351 178 48 27 chr17 7909270 7909416 -77529064 + (TA)n Simple_repeat Simple_repeat 2 150 0 32 0 0 0 chr17 7910035 7910067 -77528413 + AT_rich Low_complexity Low_complexity 1 32 0 253 186 29 29 chr17 7910355 7910425 -77528055 + GA-rich Low_complexity Low_complexity 2 71 0 245 307 18 18 chr17 7910555 7910747 -77527733 + GA-rich Low_complexity Low_complexity 1 192 0 348 309 24 18 chr17 7912178 7912343 -77526137 + (CAGG)n Simple_repeat Simple_repeat 2 167 0 244 306 8 32 chr17 7912319 7912443 -77526037 + GA-rich Low_complexity Low_complexity 6 126 0 * 234 0 0 0 chr17 7914426 7914452 -77524028 + (CA)n Simple_repeat Simple_repeat 2 27 0 381 43 0 0 chr17 7914803 7914850 -77523630 + (TA)n Simple_repeat Simple_repeat 1 47 0 360 0 0 0 chr17 7915052 7915092 -77523388 + (GGA)n Simple_repeat Simple_repeat 2 41 0 582 79 0 0 chr17 7915093 7915169 -77523311 + AluSg/x SINE Alu 153 228 -82 227 189 0 0 chr17 7915270 7915323 -77523157 + GA-rich Low_complexity Low_complexity 1 53 0 396 71 0 0 chr17 7915394 7915450 -77523030 + (CCG)n Simple_repeat Simple_repeat 2 57 0 240 35 0 0 chr17 7915676 7915705 -77522775 + (CCG)n Simple_repeat Simple_repeat 2 30 0 1976 99 21 14 chr17 8121321 8121603 -77316877 + AluSx SINE Alu 18 301 -11 2114 134 13 0 chr17 8121603 8121908 -77316572 + AluSx SINE Alu 1 309 -3 188 293 0 40 chr17 8121935 8122010 -77316470 - L2 LINE L2 0 3313 3242 634 124 10 0 chr17 8122013 8122110 -77316370 + MER4A LTR ERV1 1 98 -566 308 47 23 0 chr17 8122106 8122149 -77316331 + MER4A LTR ERV1 257 300 -364 * 2190 84 0 3 chr17 8122155 8122441 -77316039 + AluSc SINE Alu 5 289 -20 1958 152 0 3 chr17 8123240 8123549 -77314931 - AluSx SINE Alu -4 308 1 762 181 0 8 chr17 8123747 8123874 -77314606 + FLAM_C SINE Alu 1 126 -17 189 181 14 42 chr17 8124256 8124328 -77314152 + (TATATG)n Simple_repeat Simple_repeat 3 72 0 2055 134 0 0 chr17 8124438 8124737 -77313743 + AluSx SINE Alu 3 301 -11 421 224 51 0 chr17 8124820 8124918 -77313562 + MIR SINE MIR 28 130 -132 2367 85 0 0 chr17 8125160 8125467 -77313013 - AluSq SINE Alu -6 307 1 299 268 41 0 chr17 8125718 8125815 -77312665 - MLT1K LTR MaLR 0 588 488 2107 131 0 0 chr17 8125815 8126120 -77312360 + AluSx SINE Alu 1 305 -7 884 195 0 6 chr17 8126120 8126313 -77312167 + AluSg/x SINE Alu 134 312 0 269 245 137 50 chr17 8126313 8126452 -77312028 - MLT1K LTR MaLR -111 477 327 260 134 0 149 chr17 8126588 8126608 -77311872 + MER58 DNA MER1_type 2364 2385 -35 1944 98 12 67 chr17 8126608 8126935 -77311545 - AluSg SINE Alu -1 309 1 260 134 0 149 chr17 8126935 8126981 -77311499 + MER58 DNA MER1_type 2385 2420 0 277 200 50 40 chr17 8127225 8127325 -77311155 - HAL1 LINE L1 -347 2160 2060 369 175 9 85 chr17 8127401 8127497 -77310983 + AluJ/FLAM SINE Alu 1 75 -227 976 102 88 0 chr17 812750